From 73c1528534af1ced062e902ddb57b6cfb09a5eed Mon Sep 17 00:00:00 2001
From: nichole <nicholema621@gmail.com>
Date: Mon, 22 Jul 2024 16:27:03 -0700
Subject: [PATCH 01/12] add format AP

---
 trtools/mergeSTR/mergeSTR.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/trtools/mergeSTR/mergeSTR.py b/trtools/mergeSTR/mergeSTR.py
index 30335d63..2fb3d96a 100644
--- a/trtools/mergeSTR/mergeSTR.py
+++ b/trtools/mergeSTR/mergeSTR.py
@@ -45,7 +45,7 @@
 FORMATFIELDS = {
     trh.VcfTypes.gangstr: ["DP", "Q", "REPCN", "REPCI", "RC", "ENCLREADS", "FLNKREADS", "ML", "INS", "STDERR", "QEXP"],
     trh.VcfTypes.hipstr: ["GB", "Q", "PQ", "DP", "DSNP", "PSNP", "PDP", "GLDIFF", "DSTUTTER", "DFLANKINDEL", "AB", "FS",
-                          "DAB", "ALLREADS", "MALLREADS"],
+                          "DAB", "ALLREADS", "MALLREADS","AP1","AP2"],
     trh.VcfTypes.eh: ["ADFL", "ADIR", "ADSP", "LC", "REPCI", "REPCN", "SO"],
     trh.VcfTypes.popstr: ["AD", "DP", "PL"],
     trh.VcfTypes.advntr: ["DP", "SR", "FR", "ML"]

From 5eb028e1c6f802ec830338f3ab199cb7b338eec1 Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Tue, 23 Jul 2024 19:00:02 +0000
Subject: [PATCH 02/12] add AP field in mergeSTR hipstr output

---
 trtools/mergeSTR/mergeSTR.py                  |    2 +-
 trtools/mergeSTR/tests/test_mergeSTR.py       |   14 +
 .../beagle/hipstr_imputed_merge1.vcf          | 3416 +++++++++++++++++
 .../beagle/hipstr_imputed_merge2.vcf          | 3416 +++++++++++++++++
 .../hipstr_imputed_merge1.vcf.gz              |  Bin 0 -> 30083 bytes
 .../hipstr_imputed_merge1.vcf.gz.tbi          |  Bin 0 -> 130 bytes
 .../hipstr_imputed_merge2.vcf.gz              |  Bin 0 -> 30088 bytes
 .../hipstr_imputed_merge2.vcf.gz.tbi          |  Bin 0 -> 130 bytes
 8 files changed, 6847 insertions(+), 1 deletion(-)
 create mode 100644 trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge1.vcf
 create mode 100644 trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge2.vcf
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge1.vcf.gz
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge1.vcf.gz.tbi
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz.tbi

diff --git a/trtools/mergeSTR/mergeSTR.py b/trtools/mergeSTR/mergeSTR.py
index 2fb3d96a..62d9571e 100644
--- a/trtools/mergeSTR/mergeSTR.py
+++ b/trtools/mergeSTR/mergeSTR.py
@@ -45,7 +45,7 @@
 FORMATFIELDS = {
     trh.VcfTypes.gangstr: ["DP", "Q", "REPCN", "REPCI", "RC", "ENCLREADS", "FLNKREADS", "ML", "INS", "STDERR", "QEXP"],
     trh.VcfTypes.hipstr: ["GB", "Q", "PQ", "DP", "DSNP", "PSNP", "PDP", "GLDIFF", "DSTUTTER", "DFLANKINDEL", "AB", "FS",
-                          "DAB", "ALLREADS", "MALLREADS","AP1","AP2"],
+                          "DAB", "ALLREADS", "MALLREADS","AP1","AP2","DS"],
     trh.VcfTypes.eh: ["ADFL", "ADIR", "ADSP", "LC", "REPCI", "REPCN", "SO"],
     trh.VcfTypes.popstr: ["AD", "DP", "PL"],
     trh.VcfTypes.advntr: ["DP", "SR", "FR", "ML"]
diff --git a/trtools/mergeSTR/tests/test_mergeSTR.py b/trtools/mergeSTR/tests/test_mergeSTR.py
index 0662339b..3fb44ee0 100644
--- a/trtools/mergeSTR/tests/test_mergeSTR.py
+++ b/trtools/mergeSTR/tests/test_mergeSTR.py
@@ -115,6 +115,20 @@ def test_hipSTRRightFile(args, mrgvcfdir):
     args.verbose = True
     assert main(args)==0
 
+# Test right files or directory - hipstr with FORMAT field
+def test_hipSTRRightFile_AP(args, mrgvcfdir):
+    fname1 = os.path.join(mrgvcfdir, "hipstr_imputed_merge1.vcf.gz")
+    fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_merge2.vcf.gz")
+    args.vcftype = "hipstr"
+    args.vcfs = fname1 + "," + fname2
+    assert main(args)==0
+    args.vcftype = "auto"
+    assert main(args)==0
+    args.update_sample_from_file = True
+    assert main(args)==0
+    args.verbose = True
+    assert main(args)==0
+
 # Test right files or directory - ExpansionHunter
 def test_ExpansionHunterRightFile(args, mrgvcfdir):
     fname1 = os.path.join(mrgvcfdir, "test_file_eh1.vcf.gz")
diff --git a/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge1.vcf b/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge1.vcf
new file mode 100644
index 00000000..2f4a8cf0
--- /dev/null
+++ b/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge1.vcf
@@ -0,0 +1,3416 @@
+##fileformat=VCFv4.2
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+##contig=<ID=HLA-DRB1*15:03:01:02,length=11569>
+##contig=<ID=HLA-DRB1*16:02:01,length=11005>
+##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03710.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03763.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
+##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##filedate=20220809
+##source="beagle.22Jul22.46e.jar"
+##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated ALT Allele Frequencies">
+##INFO=<ID=DR2,Number=A,Type=Float,Description="Dosage R-Squared: estimated squared correlation between estimated REF dose [P(RA) + 2*P(RR)] and true REF dose">
+##INFO=<ID=IMP,Number=0,Type=Flag,Description="Imputed marker">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DS,Number=A,Type=Float,Description="estimated ALT dose [P(RA) + 2*P(AA)]">
+##FORMAT=<ID=AP1,Number=A,Type=Float,Description="estimated ALT dose on first haplotype">
+##FORMAT=<ID=AP2,Number=A,Type=Float,Description="estimated ALT dose on second haplotype">
+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##bcftools_annotateVersion=1.15.1+htslib-1.15.1
+##bcftools_annotateCommand=annotate -a hipstr_100.vcf.gz -c INFO/START,INFO/END,INFO/PERIOD -o hipstr_imputed_reheadered_reannotated.vcf.gz -O z hipstr_imputed_reheadered.vcf.gz; Date=Tue Aug  9 08:47:15 2022
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##bcftools_viewVersion=1.19+htslib-1.20
+##bcftools_viewCommand=view -s HG02256,HG02257 -Oz -o hipstr_imputed_merge1.vcf.gz hipstr_imputed.vcf.gz; Date=Tue Jul 23 18:29:28 2024
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02256	HG02257
+chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	PASS	DR2=0;AF=0;END=1007618;START=1007589;PERIOD=6;AC=0;AN=4	GT:DS:AP1:AP2	0|0:0:0:0	0|0:0:0:1
+chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CAACAACAACAACAACAA,CGACAACAACAACAA	.	PASS	DR2=0,0,0,0;AF=0,0,0,0;END=1111547;START=1111533;PERIOD=3;AC=0,0,0,0;AN=4	GT:DS:AP1:AP2	0|0:0,0,0,0:0,0,0,0:0,0,0,0	0|0:0,0,0,0:0,0,0,1:0,0,0,1
diff --git a/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge2.vcf b/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge2.vcf
new file mode 100644
index 00000000..010e1267
--- /dev/null
+++ b/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge2.vcf
@@ -0,0 +1,3416 @@
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/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03710.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03763.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
+##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##filedate=20220809
+##source="beagle.22Jul22.46e.jar"
+##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated ALT Allele Frequencies">
+##INFO=<ID=DR2,Number=A,Type=Float,Description="Dosage R-Squared: estimated squared correlation between estimated REF dose [P(RA) + 2*P(RR)] and true REF dose">
+##INFO=<ID=IMP,Number=0,Type=Flag,Description="Imputed marker">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DS,Number=A,Type=Float,Description="estimated ALT dose [P(RA) + 2*P(AA)]">
+##FORMAT=<ID=AP1,Number=A,Type=Float,Description="estimated ALT dose on first haplotype">
+##FORMAT=<ID=AP2,Number=A,Type=Float,Description="estimated ALT dose on second haplotype">
+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##bcftools_annotateVersion=1.15.1+htslib-1.15.1
+##bcftools_annotateCommand=annotate -a hipstr_100.vcf.gz -c INFO/START,INFO/END,INFO/PERIOD -o hipstr_imputed_reheadered_reannotated.vcf.gz -O z hipstr_imputed_reheadered.vcf.gz; Date=Tue Aug  9 08:47:15 2022
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##bcftools_viewVersion=1.19+htslib-1.20
+##bcftools_viewCommand=view -s HG02258,HG02280 -Oz -o hipstr_imputed_merge2.vcf.gz hipstr_imputed.vcf.gz; Date=Tue Jul 23 18:30:08 2024
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02258	HG02280
+chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	PASS	DR2=0;AF=0;END=1007618;START=1007589;PERIOD=6;AC=0;AN=4	GT:DS:AP1:AP2	0|0:0:0:0.5	0|0:0:0:0.25
+chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CAACAACAACAACAACAA,CGACAACAACAACAA	.	PASS	DR2=0,0,0,0;AF=0,0,0,0;END=1111547;START=1111533;PERIOD=3;AC=0,0,0,0;AN=4	GT:DS:AP1:AP2	0|0:0,0,0,0:0,0,0,0:0,0,0,0.25	0|0:0,0,0,0:0,0,0,0:0,0,0,0.5
diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge1.vcf.gz b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge1.vcf.gz
new file mode 100644
index 0000000000000000000000000000000000000000..48bbe8cfc1701cdb906bf88e569d322f78dd88e7
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diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge1.vcf.gz.tbi b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge1.vcf.gz.tbi
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diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz
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HcmV?d00001

diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz.tbi b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz.tbi
new file mode 100644
index 0000000000000000000000000000000000000000..5794c4af0bbea93b699b1d90a5356d9d2483cea4
GIT binary patch
literal 130
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OJen=i49s9lK?DHguO~$S

literal 0
HcmV?d00001


From 92a258cb1d39f514e83d7a8040d617614151d04c Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Thu, 25 Jul 2024 15:46:15 +0000
Subject: [PATCH 03/12] delete duplicate test files

---
 .../beagle/hipstr_imputed_merge1.vcf          | 3416 -----------------
 .../beagle/hipstr_imputed_merge2.vcf          | 3416 -----------------
 2 files changed, 6832 deletions(-)
 delete mode 100644 trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge1.vcf
 delete mode 100644 trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge2.vcf

diff --git a/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge1.vcf b/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge1.vcf
deleted file mode 100644
index 2f4a8cf0..00000000
--- a/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge1.vcf
+++ /dev/null
@@ -1,3416 +0,0 @@
-##fileformat=VCFv4.2
-##FILTER=<ID=PASS,Description="All filters passed">
-##contig=<ID=chr1,length=248956422>
-##contig=<ID=chr2,length=242193529>
-##contig=<ID=chr3,length=198295559>
-##contig=<ID=chr4,length=190214555>
-##contig=<ID=chr5,length=181538259>
-##contig=<ID=chr6,length=170805979>
-##contig=<ID=chr7,length=159345973>
-##contig=<ID=chr8,length=145138636>
-##contig=<ID=chr9,length=138394717>
-##contig=<ID=chr10,length=133797422>
-##contig=<ID=chr11,length=135086622>
-##contig=<ID=chr12,length=133275309>
-##contig=<ID=chr13,length=114364328>
-##contig=<ID=chr14,length=107043718>
-##contig=<ID=chr15,length=101991189>
-##contig=<ID=chr16,length=90338345>
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-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00674.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00405.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00418.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00423.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG005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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01551.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01363.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01352.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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elated/HG03164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03170.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03305.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03522.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02666.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02715.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03241.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02820.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02568.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02569.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02584.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02590.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02615.final.cram,/projects/ps-gymreklab/resources/d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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gym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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
-##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
-##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
-##filedate=20220809
-##source="beagle.22Jul22.46e.jar"
-##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated ALT Allele Frequencies">
-##INFO=<ID=DR2,Number=A,Type=Float,Description="Dosage R-Squared: estimated squared correlation between estimated REF dose [P(RA) + 2*P(RR)] and true REF dose">
-##INFO=<ID=IMP,Number=0,Type=Flag,Description="Imputed marker">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DS,Number=A,Type=Float,Description="estimated ALT dose [P(RA) + 2*P(AA)]">
-##FORMAT=<ID=AP1,Number=A,Type=Float,Description="estimated ALT dose on first haplotype">
-##FORMAT=<ID=AP2,Number=A,Type=Float,Description="estimated ALT dose on second haplotype">
-##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
-##bcftools_annotateVersion=1.15.1+htslib-1.15.1
-##bcftools_annotateCommand=annotate -a hipstr_100.vcf.gz -c INFO/START,INFO/END,INFO/PERIOD -o hipstr_imputed_reheadered_reannotated.vcf.gz -O z hipstr_imputed_reheadered.vcf.gz; Date=Tue Aug  9 08:47:15 2022
-##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes">
-##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##bcftools_viewVersion=1.19+htslib-1.20
-##bcftools_viewCommand=view -s HG02256,HG02257 -Oz -o hipstr_imputed_merge1.vcf.gz hipstr_imputed.vcf.gz; Date=Tue Jul 23 18:29:28 2024
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02256	HG02257
-chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	PASS	DR2=0;AF=0;END=1007618;START=1007589;PERIOD=6;AC=0;AN=4	GT:DS:AP1:AP2	0|0:0:0:0	0|0:0:0:1
-chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CAACAACAACAACAACAA,CGACAACAACAACAA	.	PASS	DR2=0,0,0,0;AF=0,0,0,0;END=1111547;START=1111533;PERIOD=3;AC=0,0,0,0;AN=4	GT:DS:AP1:AP2	0|0:0,0,0,0:0,0,0,0:0,0,0,0	0|0:0,0,0,0:0,0,0,1:0,0,0,1
diff --git a/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge2.vcf b/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge2.vcf
deleted file mode 100644
index 010e1267..00000000
--- a/trtools/testsupport/sample_vcfs/beagle/hipstr_imputed_merge2.vcf
+++ /dev/null
@@ -1,3416 +0,0 @@
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-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00674.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00405.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00418.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00423.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG005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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01551.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01363.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01352.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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elated/HG03164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03170.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03305.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03522.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02666.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02715.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03241.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02820.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02568.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02569.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02584.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02590.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02615.final.cram,/projects/ps-gymreklab/resources/d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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gym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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
-##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
-##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
-##filedate=20220809
-##source="beagle.22Jul22.46e.jar"
-##INFO=<ID=AF,Number=A,Type=Float,Description="Estimated ALT Allele Frequencies">
-##INFO=<ID=DR2,Number=A,Type=Float,Description="Dosage R-Squared: estimated squared correlation between estimated REF dose [P(RA) + 2*P(RR)] and true REF dose">
-##INFO=<ID=IMP,Number=0,Type=Flag,Description="Imputed marker">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DS,Number=A,Type=Float,Description="estimated ALT dose [P(RA) + 2*P(AA)]">
-##FORMAT=<ID=AP1,Number=A,Type=Float,Description="estimated ALT dose on first haplotype">
-##FORMAT=<ID=AP2,Number=A,Type=Float,Description="estimated ALT dose on second haplotype">
-##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
-##bcftools_annotateVersion=1.15.1+htslib-1.15.1
-##bcftools_annotateCommand=annotate -a hipstr_100.vcf.gz -c INFO/START,INFO/END,INFO/PERIOD -o hipstr_imputed_reheadered_reannotated.vcf.gz -O z hipstr_imputed_reheadered.vcf.gz; Date=Tue Aug  9 08:47:15 2022
-##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes">
-##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##bcftools_viewVersion=1.19+htslib-1.20
-##bcftools_viewCommand=view -s HG02258,HG02280 -Oz -o hipstr_imputed_merge2.vcf.gz hipstr_imputed.vcf.gz; Date=Tue Jul 23 18:30:08 2024
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02258	HG02280
-chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	PASS	DR2=0;AF=0;END=1007618;START=1007589;PERIOD=6;AC=0;AN=4	GT:DS:AP1:AP2	0|0:0:0:0.5	0|0:0:0:0.25
-chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CAACAACAACAACAACAA,CGACAACAACAACAA	.	PASS	DR2=0,0,0,0;AF=0,0,0,0;END=1111547;START=1111533;PERIOD=3;AC=0,0,0,0;AN=4	GT:DS:AP1:AP2	0|0:0,0,0,0:0,0,0,0:0,0,0,0.25	0|0:0,0,0,0:0,0,0,0:0,0,0,0.5

From 2d367dd2953b1d83003058e8984fa1fe820d3027 Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Thu, 25 Jul 2024 18:21:55 +0000
Subject: [PATCH 04/12] add AP field check

---
 trtools/mergeSTR/tests/test_mergeSTR.py       |   14 +-
 .../mergeSTR_vcfs/hipstr_imputed_merged.vcf   | 3435 +++++++++++++++++
 2 files changed, 3448 insertions(+), 1 deletion(-)
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf

diff --git a/trtools/mergeSTR/tests/test_mergeSTR.py b/trtools/mergeSTR/tests/test_mergeSTR.py
index 3fb44ee0..8b812bc5 100644
--- a/trtools/mergeSTR/tests/test_mergeSTR.py
+++ b/trtools/mergeSTR/tests/test_mergeSTR.py
@@ -9,6 +9,7 @@
 from trtools.testsupport.utils import assert_same_vcf
 
 
+
 # Set up base argparser
 @pytest.fixture
 def args(tmpdir):
@@ -115,7 +116,7 @@ def test_hipSTRRightFile(args, mrgvcfdir):
     args.verbose = True
     assert main(args)==0
 
-# Test right files or directory - hipstr with FORMAT field
+# Test right files or directory - hipstr with FORMAT AP field
 def test_hipSTRRightFile_AP(args, mrgvcfdir):
     fname1 = os.path.join(mrgvcfdir, "hipstr_imputed_merge1.vcf.gz")
     fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_merge2.vcf.gz")
@@ -129,6 +130,7 @@ def test_hipSTRRightFile_AP(args, mrgvcfdir):
     args.verbose = True
     assert main(args)==0
 
+
 # Test right files or directory - ExpansionHunter
 def test_ExpansionHunterRightFile(args, mrgvcfdir):
     fname1 = os.path.join(mrgvcfdir, "test_file_eh1.vcf.gz")
@@ -365,6 +367,16 @@ def test_hipstr_output(args, mrgvcfdir):
     assert main(args) == 0
     assert_same_vcf(args.out + '.vcf', mrgvcfdir + "/hipstr_merged.vcf")
 
+#test if AP field exist
+def test_hipstr_output_AP(args, mrgvcfdir):
+    fname1 = os.path.join(mrgvcfdir, "hipstr_imputed_merge1.vcf.gz")
+    fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_merge2.vcf.gz")
+    args.vcftype = "hipstr"
+    args.vcfs = fname1 + "," + fname2
+    
+    assert main(args) == 0
+    assert_same_vcf(args.out + '.vcf', mrgvcfdir + "/hipstr_imputed_merged.vcf")
+
 def test_hipstr_output_flanking_pb_harmonization(args, mrgvcfdir):
     fname1 = os.path.join(mrgvcfdir, "hipstr-harmonized-merge-contains-flanking.vcf.gz")
     fname2 = os.path.join(mrgvcfdir, "hipstr-harmonized-merge-no-flanking.vcf.gz")
diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf
new file mode 100644
index 00000000..fee7297d
--- /dev/null
+++ b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf
@@ -0,0 +1,3435 @@
+##fileformat=VCFv4.1
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03710.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03763.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
+##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03710.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03763.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
+##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest test_mergeSTR.py::test_hipstr_output_AP
+##source="beagle.22Jul22.46e.jar"
+##contig=<ID=chr1,length=248956422>
+##contig=<ID=chr2,length=242193529>
+##contig=<ID=chr3,length=198295559>
+##contig=<ID=chr4,length=190214555>
+##contig=<ID=chr5,length=181538259>
+##contig=<ID=chr6,length=170805979>
+##contig=<ID=chr7,length=159345973>
+##contig=<ID=chr8,length=145138636>
+##contig=<ID=chr9,length=138394717>
+##contig=<ID=chr10,length=133797422>
+##contig=<ID=chr11,length=135086622>
+##contig=<ID=chr12,length=133275309>
+##contig=<ID=chr13,length=114364328>
+##contig=<ID=chr14,length=107043718>
+##contig=<ID=chr15,length=101991189>
+##contig=<ID=chr16,length=90338345>
+##contig=<ID=chr17,length=83257441>
+##contig=<ID=chr18,length=80373285>
+##contig=<ID=chr19,length=58617616>
+##contig=<ID=chr20,length=64444167>
+##contig=<ID=chr21,length=46709983>
+##contig=<ID=chr22,length=50818468>
+##contig=<ID=chrX,length=156040895>
+##contig=<ID=chrY,length=57227415>
+##contig=<ID=chrM,length=16569>
+##contig=<ID=chr1_KI270706v1_random,length=175055>
+##contig=<ID=chr1_KI270707v1_random,length=32032>
+##contig=<ID=chr1_KI270708v1_random,length=127682>
+##contig=<ID=chr1_KI270709v1_random,length=66860>
+##contig=<ID=chr1_KI270710v1_random,length=40176>
+##contig=<ID=chr1_KI270711v1_random,length=42210>
+##contig=<ID=chr1_KI270712v1_random,length=176043>
+##contig=<ID=chr1_KI270713v1_random,length=40745>
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+##contig=<ID=HLA-DRB1*16:02:01,length=11005>
+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=AP1,Number=A,Type=Float,Description="estimated ALT dose on first haplotype">
+##FORMAT=<ID=AP2,Number=A,Type=Float,Description="estimated ALT dose on second haplotype">
+##FORMAT=<ID=DS,Number=A,Type=Float,Description="estimated ALT dose [P(RA) + 2*P(AA)]">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02256	HG02257	HG02258	HG02280
+chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	.	START=1007589;END=1007618;PERIOD=6	GT:AP1:AP2:DS	0|0:0.0:0.0:0.0	0|0:0.0:1.0:0.0	0|0:0.0:0.5:0.0	0|0:0.0:0.25:0.0
+chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CGACAACAACAACAA,CAACAACAACAACAACAA	.	.	START=1111533;END=1111547;PERIOD=3	GT:AP1:AP2:DS	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.25:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.5:0.0,0.0,0.0,0.0

From 3bff4f2bd6b7ac8b8b38ee9479a8ca2c4dc5be8d Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Thu, 25 Jul 2024 18:41:42 +0000
Subject: [PATCH 05/12] add hipstr_imputed_merged.vcf.gz

---
 .../mergeSTR_vcfs/hipstr_imputed_merged.vcf   | 3435 -----------------
 .../hipstr_imputed_merged.vcf.gz              |  Bin 0 -> 40822 bytes
 2 files changed, 3435 deletions(-)
 delete mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf.gz

diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf
deleted file mode 100644
index fee7297d..00000000
--- a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf
+++ /dev/null
@@ -1,3435 +0,0 @@
-##fileformat=VCFv4.1
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00674.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00405.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00418.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00423.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG005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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01551.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01363.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01352.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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elated/HG03164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03170.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03305.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03522.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02666.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02715.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03241.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02820.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02568.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02569.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02584.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02590.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02615.final.cram,/projects/ps-gymreklab/resources/d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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gym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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
-##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00674.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00405.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00418.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00423.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG005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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01551.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01363.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01352.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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elated/HG03164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03170.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03305.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03522.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02666.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02715.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03241.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02820.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02568.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02569.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02584.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02590.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02615.final.cram,/projects/ps-gymreklab/resources/d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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gym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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
-##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest test_mergeSTR.py::test_hipstr_output_AP
-##source="beagle.22Jul22.46e.jar"
-##contig=<ID=chr1,length=248956422>
-##contig=<ID=chr2,length=242193529>
-##contig=<ID=chr3,length=198295559>
-##contig=<ID=chr4,length=190214555>
-##contig=<ID=chr5,length=181538259>
-##contig=<ID=chr6,length=170805979>
-##contig=<ID=chr7,length=159345973>
-##contig=<ID=chr8,length=145138636>
-##contig=<ID=chr9,length=138394717>
-##contig=<ID=chr10,length=133797422>
-##contig=<ID=chr11,length=135086622>
-##contig=<ID=chr12,length=133275309>
-##contig=<ID=chr13,length=114364328>
-##contig=<ID=chr14,length=107043718>
-##contig=<ID=chr15,length=101991189>
-##contig=<ID=chr16,length=90338345>
-##contig=<ID=chr17,length=83257441>
-##contig=<ID=chr18,length=80373285>
-##contig=<ID=chr19,length=58617616>
-##contig=<ID=chr20,length=64444167>
-##contig=<ID=chr21,length=46709983>
-##contig=<ID=chr22,length=50818468>
-##contig=<ID=chrX,length=156040895>
-##contig=<ID=chrY,length=57227415>
-##contig=<ID=chrM,length=16569>
-##contig=<ID=chr1_KI270706v1_random,length=175055>
-##contig=<ID=chr1_KI270707v1_random,length=32032>
-##contig=<ID=chr1_KI270708v1_random,length=127682>
-##contig=<ID=chr1_KI270709v1_random,length=66860>
-##contig=<ID=chr1_KI270710v1_random,length=40176>
-##contig=<ID=chr1_KI270711v1_random,length=42210>
-##contig=<ID=chr1_KI270712v1_random,length=176043>
-##contig=<ID=chr1_KI270713v1_random,length=40745>
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-##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
-##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
-##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=AP1,Number=A,Type=Float,Description="estimated ALT dose on first haplotype">
-##FORMAT=<ID=AP2,Number=A,Type=Float,Description="estimated ALT dose on second haplotype">
-##FORMAT=<ID=DS,Number=A,Type=Float,Description="estimated ALT dose [P(RA) + 2*P(AA)]">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02256	HG02257	HG02258	HG02280
-chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	.	START=1007589;END=1007618;PERIOD=6	GT:AP1:AP2:DS	0|0:0.0:0.0:0.0	0|0:0.0:1.0:0.0	0|0:0.0:0.5:0.0	0|0:0.0:0.25:0.0
-chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CGACAACAACAACAA,CAACAACAACAACAACAA	.	.	START=1111533;END=1111547;PERIOD=3	GT:AP1:AP2:DS	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.25:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.5:0.0,0.0,0.0,0.0
diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf.gz b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf.gz
new file mode 100644
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From c701a8e091ae68e1afab9fc1a454c497d6ab3df1 Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Thu, 25 Jul 2024 18:43:30 +0000
Subject: [PATCH 06/12] handle gz file name

---
 trtools/mergeSTR/tests/test_mergeSTR.py | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/trtools/mergeSTR/tests/test_mergeSTR.py b/trtools/mergeSTR/tests/test_mergeSTR.py
index 8b812bc5..d9b9007d 100644
--- a/trtools/mergeSTR/tests/test_mergeSTR.py
+++ b/trtools/mergeSTR/tests/test_mergeSTR.py
@@ -7,6 +7,7 @@
 
 from ..mergeSTR import *
 from trtools.testsupport.utils import assert_same_vcf
+import gzip, shutil
 
 
 
@@ -374,8 +375,12 @@ def test_hipstr_output_AP(args, mrgvcfdir):
     args.vcftype = "hipstr"
     args.vcfs = fname1 + "," + fname2
     
+
+    with gzip.open(mrgvcfdir+"/hipstr_imputed_merged.vcf.gz", 'r') as f_in, open("hipstr_imputed_merged.vcf", 'wb') as f_out:
+        shutil.copyfileobj(f_in, f_out)
     assert main(args) == 0
-    assert_same_vcf(args.out + '.vcf', mrgvcfdir + "/hipstr_imputed_merged.vcf")
+    assert_same_vcf(args.out + '.vcf', "hipstr_imputed_merged.vcf")
+    os.remove("hipstr_imputed_merged.vcf")
 
 def test_hipstr_output_flanking_pb_harmonization(args, mrgvcfdir):
     fname1 = os.path.join(mrgvcfdir, "hipstr-harmonized-merge-contains-flanking.vcf.gz")

From 6a4f89edd1847461528dc4a89dfac3a92099c788 Mon Sep 17 00:00:00 2001
From: Gymrek Lab <melissa.gymrek@gmail.com>
Date: Mon, 29 Jul 2024 18:29:39 +0000
Subject: [PATCH 07/12] Only merge Beagle-specific fields if alleles are
 identical and all files from Beagle

---
 trtools/mergeSTR/mergeSTR.py | 50 +++++++++++++++++++++++++++++++-----
 trtools/utils/mergeutils.py  | 29 +++++++++++++++++++++
 2 files changed, 72 insertions(+), 7 deletions(-)

diff --git a/trtools/mergeSTR/mergeSTR.py b/trtools/mergeSTR/mergeSTR.py
index 62d9571e..d6459b1e 100644
--- a/trtools/mergeSTR/mergeSTR.py
+++ b/trtools/mergeSTR/mergeSTR.py
@@ -45,14 +45,15 @@
 FORMATFIELDS = {
     trh.VcfTypes.gangstr: ["DP", "Q", "REPCN", "REPCI", "RC", "ENCLREADS", "FLNKREADS", "ML", "INS", "STDERR", "QEXP"],
     trh.VcfTypes.hipstr: ["GB", "Q", "PQ", "DP", "DSNP", "PSNP", "PDP", "GLDIFF", "DSTUTTER", "DFLANKINDEL", "AB", "FS",
-                          "DAB", "ALLREADS", "MALLREADS","AP1","AP2","DS"],
+                          "DAB", "ALLREADS", "MALLREADS"],
     trh.VcfTypes.eh: ["ADFL", "ADIR", "ADSP", "LC", "REPCI", "REPCN", "SO"],
     trh.VcfTypes.popstr: ["AD", "DP", "PL"],
     trh.VcfTypes.advntr: ["DP", "SR", "FR", "ML"]
 }
+BEAGLEFORMATFIELDS = ["AP1", "AP2", "DS"]
 
-
-def WriteMergedHeader(vcfw: TextIO, args: Any, readers: List[cyvcf2.VCF], cmd: str, vcftype: Union[str, trh.VcfTypes]) \
+def WriteMergedHeader(vcfw: TextIO, args: Any, readers: List[cyvcf2.VCF], cmd: str, \
+                      vcftype: Union[str, trh.VcfTypes], isbeagle: bool) \
         -> Union[Tuple[List[Tuple[str, bool]], List[str]], Tuple[None, None]]:
     r"""Write merged header for VCFs in args.vcfs
 
@@ -72,6 +73,8 @@ def WriteMergedHeader(vcfw: TextIO, args: Any, readers: List[cyvcf2.VCF], cmd: s
        Command used to call this program
     vcftype : str
        Type of VCF files being merged
+    isbeagle: bool
+       Files being merged were generated by Beagle 
 
     Returns
     -------
@@ -136,7 +139,10 @@ def get_header_lines(field: str, reader: cyvcf2.VCF) -> List[str]:
     # Write FORMAT fields, different for each tool
     useformat: List[str] = []
     formats = get_header_lines('format', readers[0])
-    for field in FORMATFIELDS[vcftype]:
+    attempt_format_fields = FORMATFIELDS[vcftype].copy() # copy since we will modify
+    if isbeagle:
+        attempt_format_fields.extend(BEAGLEFORMATFIELDS)
+    for field in attempt_format_fields:
         this_format = [line for line in formats if 'ID=' + field + ',' in line]
         if len(this_format) == 0:
             common.WARNING("Expected format field %s not found. Skipping" % field)
@@ -292,6 +298,26 @@ def HipstrKey(record: trh.TRRecord):
             )
     return out_alts, mappings
 
+def CheckIdenticalAlleleOrder(mappings: List[np.ndarray]) -> bool:
+    r"""Check if alleles are identical sequence/order between all records being merged
+    
+    Parameters
+    ----------
+    mappings : list of np.ndarray
+       See GetAltAlleles
+
+    Returns
+    -------
+    same_alleles : bool
+       True if all alleles are identical between records
+    """
+    if len(mappings) == 1: return True
+    for i in range(1, len(mappings)):
+        if len(mappings[i]) != len(mappings[0]):
+            return False
+        if not np.all(mappings[i]==mappings[0]):
+            return False
+    return True
 
 def GetID(idval: str) -> str:
     r"""Get the ID for a a record
@@ -479,6 +505,15 @@ def MergeRecords(readers: cyvcf2.VCF, vcftype: Union[str, trh.VcfTypes], num_sam
 
     alt_alleles, mappings = GetAltAlleles(ref_allele, current_records, mergelist, vcftype)
 
+    # Check beagle-specific fields, and only merge if
+    # ref/alt alleles are identical and in same order
+    mergeformats = useformat.copy()
+    if not CheckIdenticalAlleleOrder(mappings):
+        for field in BEAGLEFORMATFIELDS:
+            if field in mergeformats:
+                common.WARNING("Conflicting alt alleles found at {}:{}. Skipping merging of Beagle field {}.".format(chrom, pos, field))
+                mergeformats.remove(field)
+
     # Set common fields
     vcfw.write(chrom)  # CHROM
     vcfw.write('\t')
@@ -511,14 +546,14 @@ def MergeRecords(readers: cyvcf2.VCF, vcftype: Union[str, trh.VcfTypes], num_sam
     vcfw.write('\t')
 
     # FORMAT - add GT to front
-    vcfw.write(":".join(["GT"] + useformat))
+    vcfw.write(":".join(["GT"] + mergeformats))
 
     # Samples
     alleles = [ref_allele] + alt_alleles
     map_iter = iter(mappings)
     for i in range(len(mergelist)):
         if mergelist[i]:
-            WriteSampleData(vcfw, current_records[i].vcfrecord, alleles, useformat,
+            WriteSampleData(vcfw, current_records[i].vcfrecord, alleles, mergeformats,
                             format_type, next(map_iter))
         else:  # NOCALL
             if num_samples[i] > 0:
@@ -610,6 +645,7 @@ def main(args: Any) -> int:
     ### Check inferred type of each is the same
     try:
         vcftype = mergeutils.GetAndCheckVCFType(vcfreaders, args.vcftype)
+        isbeagle = mergeutils.GetAndCheckBeagle(vcfreaders)
     except ValueError as ve:
         common.WARNING('Error: ' + str(ve))
         return 1
@@ -617,7 +653,7 @@ def main(args: Any) -> int:
     ### Set up VCF writer ###
     vcfw = open(args.out + ".vcf", "w")
 
-    useinfo, useformat = WriteMergedHeader(vcfw, args, vcfreaders, " ".join(sys.argv), vcftype)
+    useinfo, useformat = WriteMergedHeader(vcfw, args, vcfreaders, " ".join(sys.argv), vcftype, isbeagle)
 
     if useinfo is None or useformat is None:
         common.WARNING("Error writing merged header. Quitting")
diff --git a/trtools/utils/mergeutils.py b/trtools/utils/mergeutils.py
index 297d9b6c..bb6ba93d 100644
--- a/trtools/utils/mergeutils.py
+++ b/trtools/utils/mergeutils.py
@@ -138,6 +138,35 @@ def GetAndCheckVCFType(vcfs: List[CYVCF_READER], vcftype: str) -> str:
     else:
         raise ValueError("VCF files are of mixed types.")
 
+def GetAndCheckBeagle(vcfs: List[CYVCF_READER]) -> bool:
+    """Check if merged files are Beagle generated
+
+    If all are from Beagle, return True
+    If all are not from Beagle, return False
+    If mixed, return ValueError since in that case we will not merge
+
+    Parameters
+    ----------
+    vcfs: list of cyvcf2.VCF
+      Multiple VCFs
+
+    Returns
+    -------
+    isbeagle : bool
+      Indicates if all files are/are not Beagle generated
+
+    Raises
+    ------
+    TypeError
+      If input files are a mix of Beagle/non-Beagle
+    """
+    is_beagle = []
+    for vcf in vcfs:
+        is_beagle.append(trh.IsBeagleVCF(vcf))
+    if len(set(is_beagle)) == 1:
+        return is_beagle[0]
+    else:
+        raise ValueError("Mix of Beagle/non-Beagle VCFs identified.")    
 
 def GetChromOrder(r: CYVCF_RECORD, chroms: List[str]) -> Union[int, float]:
     r"""Get the chromosome order of a record

From e9f90219b6a6794ecd8fc96bbae47f6f6bc7497f Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Tue, 30 Jul 2024 20:30:16 +0000
Subject: [PATCH 08/12] add test to check merge beagle/non beagle, different
 ALT allele and AP field

---
 trtools/mergeSTR/mergeSTR.py                  |   4 +++
 trtools/mergeSTR/tests/test_mergeSTR.py       |  28 +++++++++++++++---
 .../hipstr_imputed_diffALT.vcf.gz             | Bin 0 -> 30111 bytes
 .../hipstr_imputed_diffALT.vcf.gz.tbi         | Bin 0 -> 130 bytes
 .../hipstr_imputed_merge1.vcf.gz              | Bin 30083 -> 30116 bytes
 .../hipstr_imputed_merge1.vcf.gz.tbi          | Bin 130 -> 130 bytes
 .../hipstr_imputed_merge2.vcf.gz              | Bin 30088 -> 30092 bytes
 .../hipstr_imputed_merge2.vcf.gz.tbi          | Bin 130 -> 130 bytes
 .../hipstr_imputed_merged.vcf.gz              | Bin 40822 -> 40850 bytes
 .../hipstr_imputed_merged.vcf.gz.tbi          | Bin 0 -> 130 bytes
 .../mergeSTR_vcfs/hipstr_merge1.vcf.gz        | Bin 0 -> 30062 bytes
 .../mergeSTR_vcfs/hipstr_merge1.vcf.gz.tbi    | Bin 0 -> 130 bytes
 .../mergeSTR_vcfs/hipstr_merge2.vcf.gz        | Bin 0 -> 30067 bytes
 .../mergeSTR_vcfs/hipstr_merge2.vcf.gz.tbi    | Bin 0 -> 130 bytes
 14 files changed, 28 insertions(+), 4 deletions(-)
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_diffALT.vcf.gz
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_diffALT.vcf.gz.tbi
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf.gz.tbi
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merge1.vcf.gz
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merge1.vcf.gz.tbi
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merge2.vcf.gz
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merge2.vcf.gz.tbi

diff --git a/trtools/mergeSTR/mergeSTR.py b/trtools/mergeSTR/mergeSTR.py
index d6459b1e..8fad6fc2 100644
--- a/trtools/mergeSTR/mergeSTR.py
+++ b/trtools/mergeSTR/mergeSTR.py
@@ -39,6 +39,7 @@
     trh.VcfTypes.advntr: [("END", True), ("VID", True), ("RU", True), ("RC", True)]
 }
 
+BEAGLEINFOFIELDS = ["IMP"]
 # Tool-specific format fields to merge
 # Not all fields currently handled
 # If not listed here, it is ignored
@@ -124,6 +125,9 @@ def get_header_lines(field: str, reader: cyvcf2.VCF) -> List[str]:
     # Write INFO fields, different for each tool
     useinfo: List[Tuple[str, bool]] = []
     infos = get_header_lines('info', readers[0])
+    attempt_info_fields = INFOFIELDS[vcftype].copy() # copy since we will modify
+    if isbeagle:
+        attempt_info_fields.extend(BEAGLEINFOFIELDS)
     for (field, reqd) in INFOFIELDS[vcftype]:
         this_info = [line for line in infos if 'ID=' + field + ',' in line]
         if len(this_info) == 0:
diff --git a/trtools/mergeSTR/tests/test_mergeSTR.py b/trtools/mergeSTR/tests/test_mergeSTR.py
index d9b9007d..7c4889a8 100644
--- a/trtools/mergeSTR/tests/test_mergeSTR.py
+++ b/trtools/mergeSTR/tests/test_mergeSTR.py
@@ -117,8 +117,8 @@ def test_hipSTRRightFile(args, mrgvcfdir):
     args.verbose = True
     assert main(args)==0
 
-# Test right files or directory - hipstr with FORMAT AP field
-def test_hipSTRRightFile_AP(args, mrgvcfdir):
+# Test right files or directory - hipstr with FORMAT AP field and IMP
+def test_hipSTRRightFile_Beagle(args, mrgvcfdir):
     fname1 = os.path.join(mrgvcfdir, "hipstr_imputed_merge1.vcf.gz")
     fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_merge2.vcf.gz")
     args.vcftype = "hipstr"
@@ -126,7 +126,7 @@ def test_hipSTRRightFile_AP(args, mrgvcfdir):
     assert main(args)==0
     args.vcftype = "auto"
     assert main(args)==0
-    args.update_sample_from_file = True
+    args.update_sample_from_file = False
     assert main(args)==0
     args.verbose = True
     assert main(args)==0
@@ -173,6 +173,16 @@ def test_multiple_vcf_types(args, mrgvcfdir, capsys):
     assert main(args) == 1
     assert 'mixed types' in capsys.readouterr().err
 
+
+
+def test_mixed_beagle_types(args, mrgvcfdir, capsys):
+    fname1 = os.path.join(mrgvcfdir, "hipstr_merge1.vcf.gz")
+    fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_merge2.vcf.gz")
+    args.vcftype = "auto"
+    args.vcfs = fname1 + "," + fname2
+    assert main(args) == 1
+    assert 'Mix of Beagle/non-Beagle VCFs identified.' in capsys.readouterr().err
+
 def test_duplicate_ids(args, mrgvcfdir, capsys):
     fname1 = os.path.join(mrgvcfdir, "test_file_gangstr1.vcf.gz")
     fname2 = os.path.join(mrgvcfdir, "test_file_gangstr_dupID.vcf.gz")
@@ -269,6 +279,16 @@ def test_ConflictingRefs():
     retval = GetRefAllele(dummy_records, [True, True, False], None)
     assert retval == "CAGCAG"
 
+# to check beagle vcf with different number of ALT alllels
+def test_DifferentAltAllele(args, mrgvcfdir,capsys):
+    fname1 = os.path.join(mrgvcfdir, "hipstr_imputed_merge2.vcf.gz")
+    fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_diffALT.vcf.gz")
+    args.vcfs = fname1 + "," + fname2
+    assert main(args) == 0
+    assert ("Conflicting alt alleles found at" in capsys.readouterr().err)
+    
+
+
 def test_GetInfoItem(capsys):
     # Set up dummy records
     dummy_records = []
@@ -369,7 +389,7 @@ def test_hipstr_output(args, mrgvcfdir):
     assert_same_vcf(args.out + '.vcf', mrgvcfdir + "/hipstr_merged.vcf")
 
 #test if AP field exist
-def test_hipstr_output_AP(args, mrgvcfdir):
+def test_hipstr_output_Beagle(args, mrgvcfdir):
     fname1 = os.path.join(mrgvcfdir, "hipstr_imputed_merge1.vcf.gz")
     fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_merge2.vcf.gz")
     args.vcftype = "hipstr"
diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_diffALT.vcf.gz b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_diffALT.vcf.gz
new file mode 100644
index 0000000000000000000000000000000000000000..24ca0acd1fc5f139316b4b40919ef693bac24bc1
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new file mode 100644
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diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge1.vcf.gz.tbi b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge1.vcf.gz.tbi
index 57fe6efb33b4cf7fbadf878a32f1e9df2c0b1787..ceffd507738268f724d84eea908b145ab9acc434 100644
GIT binary patch
delta 81
zcmZo-Y+{^X;WbUDqr_d4d6JsM3&AFdZT!Bm(jhX-<kj9cB|X!y6?##ta>;;!p>C(t
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delta 81
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diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz
index bfb9c1e2b4f275c31cd344aa7439511e5695acea..e6a009994647370583d787c1a81768992359dbad 100644
GIT binary patch
delta 211
zcmV;^04)EA>j8}G0kElbf7Sqfk3A2AAP|OU{4K_yh+l+(h@}p-1lUdE(xn}mbnA~V
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delta 207
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diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz.tbi b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merge2.vcf.gz.tbi
index 5794c4af0bbea93b699b1d90a5356d9d2483cea4..2f72f4a56bbd35cf3c3925f5c67a28029bde5aad 100644
GIT binary patch
delta 77
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delta 77
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diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf.gz b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_merged.vcf.gz
index d6663f5c03e11ead7725e473cfaedcb85b1557a3..6eaa113c358b60007c9f01488c186900250b0161 100644
GIT binary patch
delta 18211
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diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merge2.vcf.gz.tbi b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merge2.vcf.gz.tbi
new file mode 100644
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literal 0
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From 0e4fdb047a7cb1b92d4cd9c6c0e4ff835e0f1ca2 Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Thu, 1 Aug 2024 03:59:37 +0000
Subject: [PATCH 09/12] discard IMP filed for now

---
 trtools/mergeSTR/mergeSTR.py                  |    8 +-
 .../mydir/test_AdVNTRRightFile0/test.vcf      |   15 +
 .../tests/mydir/test_AdVNTRRightFilecurrent   |    1 +
 .../test_DifferentContigLengths0/test.vcf     |    0
 .../mydir/test_DifferentContigLengthscurrent  |    1 +
 .../mydir/test_DifferentContigs0/test.vcf     |    0
 .../tests/mydir/test_DifferentContigscurrent  |    1 +
 .../test_ExpansionHunterRightFile0/test.vcf   |   22 +
 .../test_ExpansionHunterRightFilecurrent      |    1 +
 .../tests/mydir/test_FileList0/test.list      |    2 +
 .../mergeSTR/tests/mydir/test_FileListcurrent |    1 +
 .../mydir/test_GangSTRDuplicate0/test.vcf     |   43 +
 .../tests/mydir/test_GangSTRDuplicatecurrent  |    1 +
 .../mydir/test_GangSTRRightFile0/test.vcf     | 2727 ++++++
 .../tests/mydir/test_GangSTRRightFilecurrent  |    1 +
 .../mydir/test_MissingFieldWarnings0/test.vcf | 2723 ++++++
 .../mydir/test_MissingFieldWarningscurrent    |    1 +
 .../mydir/test_PopSTRRightFile0/test.vcf      | 8009 +++++++++++++++++
 .../tests/mydir/test_PopSTRRightFilecurrent   |    1 +
 .../test_RecordChromsNotInContigs0/test.vcf   |   28 +
 .../test_RecordChromsNotInContigscurrent      |    1 +
 .../test_SameContigsDifferentOrder0/test.vcf  |  341 +
 .../test_SameContigsDifferentOrdercurrent     |    1 +
 .../tests/mydir/test_advntr_output0/test.vcf  |   15 +
 .../tests/mydir/test_advntr_outputcurrent     |    1 +
 .../test_alt_same_len_as_ref_diffe0/test.vcf} |    2 +-
 .../test_alt_same_len_as_ref_diffecurrent     |    1 +
 .../tests/mydir/test_duplicate_ids0/test.vcf  |   43 +
 .../tests/mydir/test_duplicate_idscurrent     |    1 +
 .../test_eh_mixed_ploidy_no_alt0/test.vcf     |   22 +
 .../mydir/test_eh_mixed_ploidy_no_altcurrent  |    1 +
 .../tests/mydir/test_eh_no_alt0/test.vcf      |   22 +
 .../tests/mydir/test_eh_no_altcurrent         |    1 +
 .../tests/mydir/test_eh_output0/test.vcf      |   22 +
 .../tests/mydir/test_eh_outputcurrent         |    1 +
 .../tests/mydir/test_gangstr_output0/test.vcf | 2727 ++++++
 .../tests/mydir/test_gangstr_outputcurrent    |    1 +
 .../mydir/test_hipSTRRightFile0/test.vcf      |  126 +
 .../mydir/test_hipSTRRightFile_AP0/test.vcf   | 3435 +++++++
 .../mydir/test_hipSTRRightFile_APcurrent      |    1 +
 .../tests/mydir/test_hipSTRRightFilecurrent   |    1 +
 .../tests/mydir/test_hipstr_output0/test.vcf  |  126 +
 .../mydir/test_hipstr_output_AP0/test.vcf     | 3435 +++++++
 .../tests/mydir/test_hipstr_output_APcurrent  |    1 +
 .../test_hipstr_output_flanking_pb0/test.vcf  |  128 +
 .../test_hipstr_output_flanking_pbcurrent     |    1 +
 .../tests/mydir/test_hipstr_outputcurrent     |    1 +
 .../mydir/test_multiple_vcf_typescurrent      |    1 +
 .../tests/mydir/test_popstr_output0/test.vcf  | 8009 +++++++++++++++++
 .../tests/mydir/test_popstr_outputcurrent     |    1 +
 50 files changed, 32050 insertions(+), 5 deletions(-)
 create mode 100644 trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_AdVNTRRightFilecurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_DifferentContigLengths0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_DifferentContigLengthscurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_DifferentContigs0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_DifferentContigscurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFilecurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_FileList0/test.list
 create mode 120000 trtools/mergeSTR/tests/mydir/test_FileListcurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_GangSTRDuplicatecurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_GangSTRRightFilecurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_MissingFieldWarningscurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_PopSTRRightFilecurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigscurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrdercurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_advntr_output0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_advntr_outputcurrent
 rename trtools/{testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged.vcf => mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0/test.vcf} (96%)
 create mode 120000 trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffecurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_duplicate_ids0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_duplicate_idscurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_altcurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_eh_no_alt0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_eh_no_altcurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_eh_output0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_eh_outputcurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_gangstr_output0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_gangstr_outputcurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0/test.vcf
 create mode 100644 trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_APcurrent
 create mode 120000 trtools/mergeSTR/tests/mydir/test_hipSTRRightFilecurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_hipstr_output0/test.vcf
 create mode 100644 trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_hipstr_output_APcurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pbcurrent
 create mode 120000 trtools/mergeSTR/tests/mydir/test_hipstr_outputcurrent
 create mode 120000 trtools/mergeSTR/tests/mydir/test_multiple_vcf_typescurrent
 create mode 100644 trtools/mergeSTR/tests/mydir/test_popstr_output0/test.vcf
 create mode 120000 trtools/mergeSTR/tests/mydir/test_popstr_outputcurrent

diff --git a/trtools/mergeSTR/mergeSTR.py b/trtools/mergeSTR/mergeSTR.py
index 8fad6fc2..a1838955 100644
--- a/trtools/mergeSTR/mergeSTR.py
+++ b/trtools/mergeSTR/mergeSTR.py
@@ -39,7 +39,7 @@
     trh.VcfTypes.advntr: [("END", True), ("VID", True), ("RU", True), ("RC", True)]
 }
 
-BEAGLEINFOFIELDS = ["IMP"]
+#BEAGLEINFOFIELDS = ["IMP"]
 # Tool-specific format fields to merge
 # Not all fields currently handled
 # If not listed here, it is ignored
@@ -125,9 +125,9 @@ def get_header_lines(field: str, reader: cyvcf2.VCF) -> List[str]:
     # Write INFO fields, different for each tool
     useinfo: List[Tuple[str, bool]] = []
     infos = get_header_lines('info', readers[0])
-    attempt_info_fields = INFOFIELDS[vcftype].copy() # copy since we will modify
-    if isbeagle:
-        attempt_info_fields.extend(BEAGLEINFOFIELDS)
+    #attempt_info_fields = INFOFIELDS[vcftype].copy() # copy since we will modify
+    #if isbeagle:
+    #    attempt_info_fields.extend(BEAGLEINFOFIELDS)
     for (field, reqd) in INFOFIELDS[vcftype]:
         this_info = [line for line in infos if 'ID=' + field + ',' in line]
         if len(this_info) == 0:
diff --git a/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0/test.vcf
new file mode 100644
index 00000000..a755df5c
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0/test.vcf
@@ -0,0 +1,15 @@
+##fileformat=VCFv4.1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##source=adVNTR ver. 1.3.3
+##contig=<ID=chr21,length=48129895>
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
+##INFO=<ID=VID,Number=1,Type=Integer,Description="VNTR ID">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
+##INFO=<ID=RC,Number=1,Type=Integer,Description="Reference repeat unit count">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read depth">
+##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Spanning read count">
+##FORMAT=<ID=FR,Number=1,Type=Integer,Description="Flanking read count">
+##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_advntr1:CSTB_2_5_testdata.bam	test_file_advntr2:CSTB_3_5_testdata.bam
+chr21	45196323	.	GCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGG	GCGCGGGGCGGGGCGCGGGGCGGG,GCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGG	.	.	END=45196359;VID=301645;RU=GCGCGGGGCGGG;RC=3	GT:DP:SR:FR:ML	1/2:60:39:21:1.0	0/0:58:37:21:1.0
diff --git a/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFilecurrent
new file mode 120000
index 00000000..9f87b34d
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFilecurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_DifferentContigLengths0/test.vcf b/trtools/mergeSTR/tests/mydir/test_DifferentContigLengths0/test.vcf
new file mode 100644
index 00000000..e69de29b
diff --git a/trtools/mergeSTR/tests/mydir/test_DifferentContigLengthscurrent b/trtools/mergeSTR/tests/mydir/test_DifferentContigLengthscurrent
new file mode 120000
index 00000000..d8ca0e74
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_DifferentContigLengthscurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_DifferentContigLengths0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_DifferentContigs0/test.vcf b/trtools/mergeSTR/tests/mydir/test_DifferentContigs0/test.vcf
new file mode 100644
index 00000000..e69de29b
diff --git a/trtools/mergeSTR/tests/mydir/test_DifferentContigscurrent b/trtools/mergeSTR/tests/mydir/test_DifferentContigscurrent
new file mode 120000
index 00000000..2eb1ef4d
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_DifferentContigscurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_DifferentContigs0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0/test.vcf
new file mode 100644
index 00000000..a581e141
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0/test.vcf
@@ -0,0 +1,22 @@
+##fileformat=VCFv4.1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr4,length=156508116>
+##ALT=<ID=STR18,Description="Allele comprised of 18 repeat units">
+##ALT=<ID=STR16,Description="Allele comprised of 16 repeat units">
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant">
+##INFO=<ID=REF,Number=1,Type=Integer,Description="Reference copy number">
+##INFO=<ID=REPID,Number=1,Type=String,Description="Repeat identifier as specified in the variant catalog">
+##INFO=<ID=RL,Number=1,Type=Integer,Description="Reference length in bp">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat unit in the reference orientation">
+##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
+##INFO=<ID=VARID,Number=1,Type=String,Description="Variant identifier as specified in the variant catalog">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=ADFL,Number=1,Type=String,Description="Number of flanking reads consistent with the allele">
+##FORMAT=<ID=ADIR,Number=1,Type=String,Description="Number of in-repeat reads consistent with the allele">
+##FORMAT=<ID=ADSP,Number=1,Type=String,Description="Number of spanning reads consistent with the allele">
+##FORMAT=<ID=LC,Number=1,Type=Float,Description="Locus coverage">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence interval for REPCN">
+##FORMAT=<ID=REPCN,Number=1,Type=String,Description="Number of repeat units spanned by the allele">
+##FORMAT=<ID=SO,Number=1,Type=String,Description="Type of reads that support the allele; can be SPANNING, FLANKING, or INREPEAT meaning that the reads span, flank, or are fully contained in the repeat">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_eh1:NA12878_S1_HTT	test_file_eh2:NA12822_S1_HTT
+chr4	3076603	.	C	<STR15>,<STR16>,<STR18>	.	.	END=3076660;REF=19;REPID=HTT;RL=57;RU=CAG;VARID=HTT	GT:ADFL:ADIR:ADSP:LC:REPCI:REPCN:SO	2/3:319/320:0/0:4/7:34.624012:16-16/18-18:16/18:SPANNING/SPANNING	1/1:310/322:0/0:3/6:33.46102:15-15/19-19:15/19:SPANNING/SPANNING
diff --git a/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFilecurrent
new file mode 120000
index 00000000..c3e181bb
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFilecurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_FileList0/test.list b/trtools/mergeSTR/tests/mydir/test_FileList0/test.list
new file mode 100644
index 00000000..e65d21af
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_FileList0/test.list
@@ -0,0 +1,2 @@
+/workspaces/TRTools/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/test_file_gangstr1.vcf.gz
+/workspaces/TRTools/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/test_file_gangstr2.vcf.gz
diff --git a/trtools/mergeSTR/tests/mydir/test_FileListcurrent b/trtools/mergeSTR/tests/mydir/test_FileListcurrent
new file mode 120000
index 00000000..67b5eb42
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_FileListcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_FileList0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0/test.vcf b/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0/test.vcf
new file mode 100644
index 00000000..b4cfe0d4
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0/test.vcf
@@ -0,0 +1,43 @@
+##fileformat=VCFv4.1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr10,length=130694993>
+##contig=<ID=chr11,length=122082543>
+##contig=<ID=chr12,length=120129022>
+##contig=<ID=chr13,length=120421639>
+##contig=<ID=chr14,length=124902244>
+##contig=<ID=chr15,length=104043685>
+##contig=<ID=chr16,length=98207768>
+##contig=<ID=chr17,length=94987271>
+##contig=<ID=chr18,length=90702639>
+##contig=<ID=chr19,length=61431566>
+##contig=<ID=chr1,length=195471971>
+##contig=<ID=chr2,length=182113224>
+##contig=<ID=chr3,length=160039680>
+##contig=<ID=chr4,length=156508116>
+##contig=<ID=chr5,length=151834684>
+##contig=<ID=chr6,length=149736546>
+##contig=<ID=chr7,length=145441459>
+##contig=<ID=chr8,length=129401213>
+##contig=<ID=chr9,length=124595110>
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
+##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
+##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
+##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
+##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
+##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
+##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
+##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
+##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
+##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
+##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
+##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
diff --git a/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicatecurrent b/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicatecurrent
new file mode 120000
index 00000000..591e4450
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicatecurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0/test.vcf
new file mode 100644
index 00000000..82cffd6f
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0/test.vcf
@@ -0,0 +1,2727 @@
+##fileformat=VCFv4.1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0358_BXD40_TyJ_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0358_BXD40_TyJ/res_chr1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr10,length=130694993>
+##contig=<ID=chr11,length=122082543>
+##contig=<ID=chr12,length=120129022>
+##contig=<ID=chr13,length=120421639>
+##contig=<ID=chr14,length=124902244>
+##contig=<ID=chr15,length=104043685>
+##contig=<ID=chr16,length=98207768>
+##contig=<ID=chr17,length=94987271>
+##contig=<ID=chr18,length=90702639>
+##contig=<ID=chr19,length=61431566>
+##contig=<ID=chr1,length=195471971>
+##contig=<ID=chr2,length=182113224>
+##contig=<ID=chr3,length=160039680>
+##contig=<ID=chr4,length=156508116>
+##contig=<ID=chr5,length=151834684>
+##contig=<ID=chr6,length=149736546>
+##contig=<ID=chr7,length=145441459>
+##contig=<ID=chr8,length=129401213>
+##contig=<ID=chr9,length=124595110>
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
+##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
+##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
+##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
+##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
+##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
+##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
+##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
+##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
+##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
+##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
+##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_gangstr1:BXD196_0366	test_file_gangstr2:BXD40_TyJ_0358
+chr1	3004986	.	TCTGTCTGTCTG	.	.	.	END=3004997;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999912:3,3:3-3,3-3:17,12,0,2:3,17:2,2:193.56:366.612,131.36:0.0,0.0:0.0,5.1188e-05,0.999949	0/0:10:0.888534:3,3:3-3,3-3:6,4,0,0:3,6:NULL:61.3218:326.675,113.385:0.0,0.0:4.48253e-20,0.0502949,0.949783
+chr1	3005549	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3005568;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:181.959:366.612,131.36:0.0,0.0:0.0,8.11654e-06,0.999994	0/0:15:0.997039:4,4:4-4,4-4:12,3,0,0:4,12:NULL:73.0332:326.675,113.385:0.0,0.0:1.26878e-38,0.00169958,0.998307
+chr1	3009351	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3009402;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.597778:24,24:22-24,22-24:7,10,0,10:23,2|24,5:5,1|6,2|7,1|8,3|9,1|11,1|12,1:204.961:366.612,131.36:0.647588,0.647588:0.977848,0.0221963,7.63327e-09	0/0:26:0.389735:26,26:24-27,24-27:4,9,0,10:26,4:4,1|5,2|6,1|9,1|12,1|16,1|19,1|22,2:180.81:326.675,113.385:1.00776,1.00776:5.15603e-05,0.319906,0.680058
+chr1	3011925	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATA,TATATATATATATATATATATATATA	.	.	END=3011970;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:24:0.941159:13,13:11-13,11-13:9,12,0,0:13,9:NULL:154.4:366.612,131.36:0.623055,0.623055:1.0,0.0,0.0	1/1:4:0.00116485:4,4:2-7,2-7:0,4,0,0:NULL:NULL:36.0216:326.675,113.385:2.01694,2.01694:0.320181,0.553256,0.12662
+chr1	3013640	.	TTTGTTTGTTTGTTTG	.	.	.	END=3013655;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999747:4,4:3-4,3-4:15,9,0,2:4,15:3,2:152.109:366.612,131.36:0.298675,0.298675:0.0,0.000127996,0.999873	0/0:13:0.976022:4,4:4-4,4-4:9,4,0,0:4,9:NULL:70.0754:326.675,113.385:0.0,0.0:1.01814e-29,0.0139402,0.986089
+chr1	3021480	.	ATGATGATGATG	.	.	.	END=3021491;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999619:4,4:4-4,4-4:15,12,0,0:4,15:NULL:172.657:366.612,131.36:0.0,0.0:0.0,0.000249006,0.999751	0/0:35:1.0:4,4:4-4,4-4:21,14,0,0:4,21:NULL:202.925:326.675,113.385:0.0,0.0:0.0,5.06534e-06,0.999995
+chr1	3029298	.	AGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAG	.	.	END=3029309;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0250924:10,10:1-13,1-13:0,9,0,2:NULL:10,2:102.272:366.612,131.36:4.66296,4.66296:4.77053e-15,0.489352,0.510706	0/0:51:1.0:6,6:6-6,6-6:37,14,0,0:6,37:NULL:279.964:326.675,113.385:0.0,0.0:0.0,6.57464e-11,1.0
+chr1	3030350	.	TTTATTTATTTA	.	.	.	END=3030361;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:18,16,0,2:3,18:2,2:235.97:366.612,131.36:0.0,0.0:0.0,6.94948e-06,0.999994	0/0:29:0.99982:3,3:3-3,3-3:15,11,0,3:3,15:2,3:178.082:326.675,113.385:0.0,0.0:0.0,8.74391e-05,0.999917
+chr1	3034212	.	ATCTATCTATCT	.	.	.	END=3034223;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:216.349:366.612,131.36:0.0,0.0:0.0,7.31421e-06,0.999994	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:295.256:326.675,113.385:0.0,0.0:0.0,1.88135e-07,1.0
+chr1	3045469	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA	.	.	END=3045496;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.219972:21,21:19-21,19-21:3,9,0,2:21,3:14,2:117.372:366.612,131.36:0.822319,0.822319:0.0,0.0,1.0	0/0:61:0.993315:14,14:13-14,13-14:20,21,0,20:13,3|14,17:4,1|5,2|6,2|8,2|9,2|10,3|12,3|13,5:450.41:326.675,113.385:0.21692,0.21692:3.05269e-18,0.00668016,0.993338
+chr1	3050738	.	TATTTATTTATTTATTTATTTATTTATT	TATTTATTTATT	.	.	END=3050765;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0818061:3,3:1-6,1-6:0,12,0,2:NULL:3,2:123.205:366.612,131.36:1.27442,1.27442:1.0,0.0,0.0	0/0:33:0.999981:7,7:7-7,7-7:18,9,0,6:7,18:5,5|6,1:198.876:326.675,113.385:0.0,0.0:0.0,1.1874e-05,0.999987
+chr1	3050955	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3051002;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.569695:19,19:17-20,17-20:15,8,0,8:17,3|18,2|19,10:6,1|7,2|12,1|13,2|16,1|17,1:221.818:366.612,131.36:0.927845,0.927845:1.0,0.0,0.0	0/0:45:0.624164:24,24:23-24,23-24:12,14,0,19:23,4|24,8:5,1|7,2|9,1|11,3|12,1|14,1|16,2|18,3|21,1|22,3|23,1:336.158:326.675,113.385:0.437216,0.437216:1.08153e-07,0.371064,0.628986
+chr1	3051394	.	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	.	.	END=3051533;RU=tttttgg;PERIOD=7;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/4:44:0.271392:17,33:12-22,27-40:0,8,11,24:NULL:3,3|4,2|5,2|6,1|7,1|8,1|9,1|10,1|11,3|12,1|14,1|15,2|16,1|17,4:373.0:366.612,131.36:3.3949,3.70244:0.0,0.99537,0.00464368	1/3:64:0.735437:6,24:5-14,21-31:6,13,7,34:5,2|6,2|11,2:3,6|4,1|5,6|6,3|7,1|8,2|9,3|10,1|12,2|13,2|14,3|15,1|16,3:567.888:326.675,113.385:2.62352,2.31001:0.0,1.0,0.0
+chr1	3062124	.	ATACATACATACATACATACATACATACATACATACATACATAC	.	.	.	END=3062167;RU=atac;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999926:11,11:11-16,11-16:16,17,0,12:11,16:4,2|5,5|6,1|7,1|10,3:309.428:366.612,131.36:1.95404,1.95404:9.34602e-34,3.55638e-05,0.999964	0/0:67:1.0:11,11:11-11,11-11:33,10,0,24:11,33:2,1|3,2|4,5|5,3|7,5|8,2|9,3|10,3:408.226:326.675,113.385:0.0,0.0:0.0,7.09676e-10,1.0
+chr1	3063324	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=3063367;RU=attt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0401205:7,7:7-10,7-10:0,6,0,4:NULL:3,3|4,1:84.8502:366.612,131.36:1.35575,1.35575:0.460155,0.439871,0.100118	0/0:49:0.999985:11,11:3-11,3-11:18,18,0,11:11,18:4,1|5,1|6,1|7,3|8,3|10,2:326.395:326.675,113.385:3.17431,3.17431:3.81225e-40,2.08506e-05,0.999979
+chr1	3068357	.	TGTGTGTGTGTG	TGTGTGTGTG	.	.	END=3068368;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.0:5,5:5-5,5-5:28,14,0,0:5,28:NULL:237.617:366.612,131.36:0.0,0.0:1.0,3.0363e-08,0.0	0/0:56:1.0:6,6:6-6,6-6:34,16,0,4:6,34:5,4:310.554:326.675,113.385:0.0,0.0:0.0,2.88506e-10,1.0
+chr1	3072369	.	TTTATTTATTTA	.	.	.	END=3072380;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999994:3,3:3-3,3-3:19,18,0,0:3,19:NULL:243.124:366.612,131.36:0.0,0.0:0.0,1.2668e-05,0.999987	0/0:55:1.0:3,3:3-3,3-3:38,14,0,3:3,38:2,3:300.933:326.675,113.385:0.0,0.0:0.0,9.70525e-12,1.0
+chr1	3072798	.	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=3072822;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999778:5,5:5-5,5-5:14,17,0,5:5,14:3,3|4,2:248.589:366.612,131.36:0.0,0.0:0.0,0.000141535,0.999858	0/0:57:1.0:5,5:5-5,5-5:24,24,0,9:5,24:3,6|4,3:383.48:326.675,113.385:0.0,0.0:0.0,2.30288e-07,1.0
+chr1	3074617	.	GAAAGAAAGAAA	.	.	.	END=3074628;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:31,7,0,0:3,31:NULL:187.183:366.612,131.36:0.0,0.0:0.0,1.99785e-09,1.0	0/0:56:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:290.927:326.675,113.385:0.0,0.0:0.0,9.75116e-13,1.0
+chr1	3074661	.	CATGCATGCATGCATG	CATGCATGCATGCATGCATG	.	.	END=3074676;RU=catg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999956:5,5:5-5,5-5:18,13,0,0:5,18:NULL:190.145:366.612,131.36:0.0,0.0:0.0,2.90782e-05,0.999972	0/0:45:1.0:4,4:4-4,4-4:34,11,0,0:4,34:NULL:240.772:326.675,113.385:0.0,0.0:0.0,6.64784e-10,1.0
+chr1	3078669	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3078700;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:31:0.0317504:36,36:33-36,33-36:0,9,0,21:NULL:6,2|7,1|12,4|15,1|18,2|19,1|21,1|22,1|25,2|26,1|30,2|31,1|33,2:249.104:366.612,131.36:0.717805,0.717805:0.0,0.0,1.0	0/1:70:0.398947:16,19:16-16,4-19:31,19,0,18:15,4|16,25|17,2:6,2|7,1|8,2|9,4|12,2|13,1|14,3|15,1|18,1|19,1:487.907:326.675,113.385:0.0,5.6364:6.95224e-32,1.39769e-10,1.0
+chr1	3079448	.	TAAATAAATAAA	.	.	.	END=3079459;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.993512:3,3:3-3,3-3:9,19,0,2:3,9:2,1|3,1:217.894:366.612,131.36:0.0,0.0:6.05535e-38,0.00285955,0.997148	0/0:59:1.0:3,3:3-3,3-3:34,25,0,0:3,34:NULL:363.805:326.675,113.385:0.0,0.0:0.0,9.55245e-10,1.0
+chr1	3079495	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=3079545;RU=aag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.313861:24,24:22-25,22-25:2,16,0,8:24,2:8,1|10,1|11,1|15,1|20,2|22,1|24,1:218.24:366.612,131.36:0.736676,0.736676:0.0,0.0,1.0	0/0:64:0.999927:17,17:17-17,17-17:17,25,0,20:17,17:4,1|6,1|7,1|9,1|10,5|11,2|12,2|13,2|14,1|15,1|16,3:456.172:326.675,113.385:0.220506,0.220506:3.04352e-34,3.54294e-05,0.999964
+chr1	3083387	.	TGACTTGACTTGACT	.	.	.	END=3083401;RU=tgact;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,22,0,0:3,23:NULL:298.503:366.612,131.36:0.0,0.0:0.0,7.11885e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:34,13,0,3:3,34:2,3:273.285:326.675,113.385:0.0,0.0:0.0,2.83012e-10,1.0
+chr1	3086726	.	ACCCACCCACCC	.	.	.	END=3086737;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.99608:3,3:3-3,3-3:11,32,0,0:3,11:NULL:333.133:366.612,131.36:0.0,0.0:2.92855e-34,0.00311361,0.996897	0/0:73:0.999993:3,3:3-3,3-3:19,47,0,7:3,19:2,7:542.298:326.675,113.385:0.0,0.0:0.0,1.27627e-05,0.999987
+chr1	3086953	.	AACAACAACAACAAC	AACAACAACAACAACAAC	.	.	END=3086967;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999987:6,6:6-6,6-6:19,24,0,4:6,19:3,1|4,3:327.885:366.612,131.36:0.0,0.0:0.0,1.24015e-05,0.999987	0/0:74:1.0:5,5:5-5,5-5:37,31,0,6:5,37:3,1|4,5:470.789:326.675,113.385:0.0,0.0:0.0,3.12612e-11,1.0
+chr1	3087313	.	GGTTGGTTGGTT	.	.	.	END=3087324;RU=ggtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.267226:3,3:1-3,1-3:2,31,0,0:3,2:NULL:290.32:366.612,131.36:0.697862,0.697862:2.84597e-06,0.590135,0.40994	0/0:44:0.999862:3,3:3-3,3-3:16,28,0,0:3,16:NULL:319.124:326.675,113.385:0.0,0.0:0.0,0.000130932,0.999872
+chr1	3091604	.	GGGTGGGTGGGT	.	.	.	END=3091615;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.930378:3,3:3-3,3-3:7,6,0,0:3,7:NULL:80.4305:366.612,131.36:0.0,0.0:5.49869e-21,0.0321949,0.967864	0/0:50:0.999847:3,3:3-3,3-3:16,34,0,0:3,16:NULL:360.367:326.675,113.385:0.0,0.0:0.0,0.000119209,0.999881
+chr1	3095754	.	TCTCTCTCTCTC	.	.	.	END=3095765;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:6,6:6-6,6-6:25,18,0,0:6,25:NULL:259.181:366.612,131.36:0.0,0.0:0.0,1.55939e-07,1.0	0/0:51:1.0:6,6:6-6,6-6:27,20,0,3:6,27:5,2|6,1:315.128:326.675,113.385:0.139319,0.139319:0.0,2.1589e-08,1.0
+chr1	3095926	.	AAAATAAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAAT	.	.	END=3095945;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.0:5,5:5-5,5-5:28,14,0,3:5,28:2,1|3,1|4,1:267.093:366.612,131.36:0.0,0.0:0.0,1.22478e-08,1.0	0/0:48:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:252.882:326.675,113.385:0.0,0.0:0.0,8.81486e-10,1.0
+chr1	3095965	.	CAAACAAACAAA	.	.	.	END=3095976;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.845777:3,3:3-3,3-3:5,17,0,2:3,5:2,2:186.828:366.612,131.36:0.0,0.0:6.79616e-16,0.074876,0.92522	0/0:55:1.0:3,3:3-3,3-3:33,20,0,2:3,33:2,2:321.64:326.675,113.385:0.0,0.0:0.0,4.6792e-10,1.0
+chr1	3097482	.	TTGTTGTTGTTGTTG	.	.	.	END=3097496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:5,5:5-5,5-5:20,11,0,0:5,20:NULL:182.636:366.612,131.36:0.0,0.0:0.0,6.53813e-06,0.999994	0/0:51:1.0:5,5:5-5,5-5:33,16,0,2:5,33:3,1|4,1:299.39:326.675,113.385:0.0,0.0:0.0,6.26055e-10,1.0
+chr1	3099936	.	GGGTGGGTGGGT	.	.	.	END=3099947;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995606:3,3:3-3,3-3:11,19,0,0:3,11:NULL:210.358:366.612,131.36:0.0,0.0:1.47805e-34,0.00247729,0.997527	0/0:56:0.994187:3,3:3-3,3-3:10,42,0,4:3,10:2,4:444.101:326.675,113.385:0.0,0.0:2.9741e-31,0.00299531,0.997012
+chr1	3105146	.	GGAAGGAAGGAA	GGAAGGAA	.	.	END=3105157;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.101965:2,2:2-3,2-3:0,15,0,2:NULL:2,2:149.768:366.612,131.36:0.390807,0.390807:0.150094,0.489507,0.360547	0/0:45:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:265.389:326.675,113.385:0.139319,0.139319:0.0,7.22832e-08,1.0
+chr1	3116455	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3116512;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.138491:22,22:19-22,19-22:2,7,0,0:22,2:NULL:72.0894:366.612,131.36:1.39572,1.39572:1.0,0.0,0.0	0/0:8:0.0319735:29,29:26-29,26-29:0,5,0,2:NULL:14,1|27,1:63.3289:326.675,113.385:0.775065,0.775065:0.170548,0.491322,0.338258
+chr1	3120976	.	TTGTTGTTGTTG	.	.	.	END=3120987;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:21,21,0,0:4,21:NULL:271.316:366.612,131.36:0.0,0.0:0.0,4.39296e-06,0.999995	0/0:70:1.0:4,4:4-4,4-4:45,22,0,3:4,45:3,3:402.864:326.675,113.385:0.0,0.0:0.0,1.57143e-13,1.0
+chr1	3122158	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3122191;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.385809:19,19:19-20,19-20:4,29,0,3:19,4:7,1|9,1|17,1:298.939:366.612,131.36:0.696174,0.696174:5.99569e-16,0.144868,0.855214	0/0:106:0.999857:17,17:9-17,9-17:48,40,0,17:9,3|16,4|17,39|18,2:5,1|8,1|9,3|10,1|12,2|13,1|14,1|15,6|16,1:767.221:326.675,113.385:3.24656,3.24656:0.0,0.000144555,0.999857
+chr1	3122249	.	CAGACAGACAGA	.	.	.	END=3122260;RU=caga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:37,9,0,0:3,37:NULL:227.276:366.612,131.36:0.0,0.0:0.0,3.83981e-11,1.0	0/0:90:1.0:3,3:3-3,3-3:58,29,0,3:3,58:2,3:515.856:326.675,113.385:0.0,0.0:0.0,7.92967e-18,1.0
+chr1	3125367	.	AACAAACAAACAAACA	AACA	.	.	END=3125382;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0664576:1,1:1-1,1-1:0,15,0,0:NULL:NULL:131.572:366.612,131.36:0.0,0.0:0.296148,0.540177,0.1637	0/0:53:1.0:4,4:4-4,4-4:28,20,0,5:4,28:3,5:327.977:326.675,113.385:0.0,0.0:0.0,1.31461e-08,1.0
+chr1	3125745	.	TTATTATTATTATTA	TTATTATTATTATTATTATTA	.	.	END=3125759;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0303655:7,7:7-10,7-10:0,5,0,0:NULL:NULL:44.1227:366.612,131.36:1.34223,1.34223:0.0,0.0,1.0	0/0:57:1.0:5,5:4-5,4-5:34,16,0,7:4,2|5,32:3,1|4,6:348.986:326.675,113.385:0.169767,0.169767:0.0,1.65507e-06,1.0
+chr1	3130290	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3130337;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:37:0.382746:24,42:24-25,23-42:15,17,0,5:23,4|24,8|25,3:14,1|17,1|19,1|21,1|40,1:291.567:366.612,131.36:0.358902,8.71943:5.58835e-11,0.00100609,0.998998	0/1:74:0.28766:24,33:24-24,23-33:21,19,0,34:22,2|23,5|24,11|25,3:4,1|7,5|9,2|10,3|12,2|13,3|14,1|15,5|16,3|17,2|18,2|20,2|25,1|26,1|31,1:576.311:326.675,113.385:0.0990099,3.5386:1.17544e-25,2.47281e-10,1.0
+chr1	3131093	.	TGACTGACTGAC	.	.	.	END=3131104;RU=tgac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:21,24,0,0:3,21:NULL:299.824:366.612,131.36:0.0,0.0:0.0,4.24596e-06,0.999995	0/0:69:1.0:3,3:3-3,3-3:46,23,0,0:3,46:NULL:387.79:326.675,113.385:0.0,0.0:0.0,1.31898e-13,1.0
+chr1	3132979	.	CTCCCTCCCTCC	.	.	.	END=3132990;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:21,16,0,0:3,21:NULL:232.377:366.612,131.36:0.0,0.0:0.0,4.51274e-06,0.999995	0/0:43:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:246.583:326.675,113.385:0.0,0.0:0.0,6.02507e-09,1.0
+chr1	3134119	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3134160;RU=ttg;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.978038:14,14:13-14,13-14:9,18,0,11:14,9:3,1|4,1|6,2|7,1|8,1|10,1|12,2|13,2:291.17:366.612,131.36:0.390807,0.390807:1.78453e-18,0.0105156,0.989507	0/0:78:1.0:14,14:14-14,14-14:33,20,0,23:14,33:4,1|5,1|6,1|7,5|8,2|9,5|10,1|11,1|12,5|13,1:503.566:326.675,113.385:0.0,0.0:0.0,6.14385e-10,1.0
+chr1	3153384	.	AATAAATAAATA	.	.	.	END=3153395;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:172.88:366.612,131.36:0.0,0.0:0.0,1.09816e-08,1.0	0/0:25:0.99958:3,3:3-3,3-3:14,8,0,3:3,14:2,3:150.528:326.675,113.385:0.0,0.0:1.58e-43,0.000173232,0.999827
+chr1	3161509	.	GGGTGGGTGGGT	.	.	.	END=3161520;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.994566:3,3:3-3,3-3:11,11,0,0:3,11:NULL:145.407:366.612,131.36:0.0,0.0:7.00828e-33,0.00300606,0.997003	0/0:36:0.458435:3,3:2-3,2-3:3,30,0,3:3,3:2,3:309.733:326.675,113.385:0.429525,0.429525:5.10445e-09,0.356641,0.643398
+chr1	3162873	.	TGCTGCTGCTGC	TGCTGCTGCTGCTGCTGC	.	.	END=3162884;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.999286:6,6:6-6,6-6:14,6,0,0:6,14:NULL:113.711:366.612,131.36:0.0,0.0:0.0,0.000160033,0.999842	0/0:43:1.0:4,4:4-4,4-4:30,13,0,0:4,30:NULL:235.308:326.675,113.385:0.0,0.0:0.0,7.52117e-09,1.0
+chr1	3163213	.	ATTCTATTCTATTCT	.	.	.	END=3163227;RU=attct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999547:3,3:3-3,3-3:14,11,0,0:3,14:NULL:153.89:366.612,131.36:0.0,0.0:3e-45,0.000269175,0.999735	0/0:20:0.999735:3,3:3-3,3-3:15,5,0,0:3,15:NULL:107.258:326.675,113.385:0.0,0.0:0.0,0.000138567,0.999864
+chr1	3164426	.	TCTTCCTCTTCCTCTTCC	.	.	.	END=3164443;RU=tcttcc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:247.76:366.612,131.36:0.0,0.0:0.0,8.32048e-07,1.0	0/0:38:0.999874:3,3:3-3,3-3:15,20,0,3:3,15:2,3:272.773:326.675,113.385:0.0,0.0:0.0,0.000119291,0.999881
+chr1	3164472	.	TCATCATCATCATCA	.	.	.	END=3164486;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:31,13,0,0:5,31:NULL:245.878:366.612,131.36:0.0,0.0:0.0,5.79757e-09,1.0	0/0:29:0.999994:5,5:5-5,5-5:19,10,0,0:5,19:NULL:171.622:326.675,113.385:0.0,0.0:0.0,1.43699e-05,0.999986
+chr1	3166251	.	AAACAAACAAAC	.	.	.	END=3166262;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:232.352:366.612,131.36:0.0,0.0:0.0,4.06024e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:185.606:326.675,113.385:0.0,0.0:0.0,1.43407e-06,1.0
+chr1	3169195	.	GTAGTAGTAGTA	.	.	.	END=3169206;RU=gta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:23,12,0,2:4,23:3,2:215.508:366.612,131.36:0.0,0.0:0.0,3.28087e-07,1.0	0/0:28:1.00001:4,4:4-4,4-4:23,5,0,0:4,23:NULL:131.731:326.675,113.385:0.0,0.0:0.0,8.37304e-07,1.0
+chr1	3169225	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=3169258;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.98882:13,13:13-14,13-14:11,15,0,16:13,11:5,1|6,3|7,1|8,2|9,3|10,1|11,1|12,4:311.885:366.612,131.36:0.341835,0.341835:0.998596,0.00140777,2.52175e-40	0/0:29:0.998848:17,17:10-17,10-17:14,6,0,8:17,14:5,1|7,1|8,1|13,2|14,1|16,2:177.981:326.675,113.385:3.49571,3.49571:7.17539e-19,0.000371304,0.999629
+chr1	3169275	.	AATAAATAAATA	.	.	.	END=3169286;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.98337:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.015:366.612,131.36:0.0,0.0:2.11896e-29,0.0105485,0.989476	0/0:22:0.996749:3,3:3-3,3-3:11,8,0,3:3,11:2,3:136.283:326.675,113.385:0.0,0.0:5.49383e-36,0.00126031,0.998746
+chr1	3170541	.	ACAAAACAAAACAAAACAAA	.	.	.	END=3170560;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:23,21,0,2:4,23:2,1|3,1:294.167:366.612,131.36:0.0,0.0:0.0,7.87942e-07,1.0	0/0:49:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:303.202:326.675,113.385:0.0,0.0:0.0,1.04162e-07,1.0
+chr1	3180457	.	GGGTGGGTGGGT	.	.	.	END=3180468;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.927026:3,3:3-3,3-3:7,20,0,0:3,7:NULL:201.976:366.612,131.36:0.0,0.0:2.07325e-21,0.0459557,0.95412	0/0:39:0.998747:3,3:3-3,3-3:13,26,0,0:3,13:NULL:272.37:326.675,113.385:0.0,0.0:5.06635e-39,0.000898473,0.999104
+chr1	3184125	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3184152;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.972076:19,19:19-20,19-20:9,9,0,13:19,9:5,1|6,2|7,2|9,1|11,1|12,1|13,2|15,1|17,2:230.576:366.612,131.36:0.398507,0.398507:0.0,0.0,1.0	0/0:39:0.714594:14,14:13-14,13-14:18,5,0,15:13,5|14,13:5,1|6,2|7,5|8,2|11,3|13,2:253.613:326.675,113.385:0.458235,0.458235:1.65788e-13,0.285296,0.714708
+chr1	3184524	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=3184541;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999765:6,6:6-6,6-6:15,19,0,3:6,15:5,3:255.504:366.612,131.36:0.0,0.0:0.0,0.000105367,0.999895	0/0:43:1.0:6,6:6-6,6-6:23,14,0,5:6,23:3,1|5,4:254.377:326.675,113.385:0.139319,0.139319:0.0,3.86922e-07,1.0
+chr1	3185654	.	AGAGAGAGAGAG	.	.	.	END=3185665;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999571:6,6:6-6,6-6:14,16,0,0:6,14:NULL:206.063:366.612,131.36:0.0,0.0:5.27875e-34,0.000291058,0.999712	0/0:35:1.00001:6,6:6-6,6-6:21,14,0,0:6,21:NULL:210.56:326.675,113.385:0.0,0.0:0.0,2.89898e-06,1.0
+chr1	3188551	.	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	.	.	END=3188606;RU=gcttttt;PERIOD=7;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.98448:7,7:7-7,7-7:9,9,0,4:7,9:5,2|6,1|7,1:146.862:366.612,131.36:0.0,0.0:0.990598,0.00942173,4.03629e-19	0/0:39:0.932444:8,8:8-8,8-8:6,15,0,18:8,6:3,6|4,4|5,2|6,2|7,2|8,2:285.442:326.675,113.385:0.0,0.0:8.04339e-25,0.0264434,0.973607
+chr1	3189480	.	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	END=3189527;RU=tta;PERIOD=3;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.627346:17,17:17-20,17-20:5,14,0,9:17,5:5,1|9,2|10,2|11,3|15,1:227.535:366.612,131.36:1.36051,1.36051:3.08894e-09,0.0980891,0.902012	0/0:32:0.980651:16,16:15-16,15-16:9,11,0,11:16,9:4,1|5,2|8,1|9,1|10,1|12,1|13,1|14,1|15,2:228.914:326.675,113.385:0.36513,0.36513:4.46609e-12,0.00943155,0.990589
+chr1	3190239	.	TTTGTTTGTTTGTTTG	.	.	.	END=3190254;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:21,12,0,5:4,21:3,5:231.473:366.612,131.36:0.0,0.0:0.0,9.58837e-07,1.0	0/0:32:1.0:4,4:4-4,4-4:19,10,0,3:4,19:3,3:194.354:326.675,113.385:0.0,0.0:0.0,4.98852e-06,0.999995
+chr1	3192683	.	GTGTGTGTGTGTGT	.	.	.	END=3192696;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:7,7:7-8,7-8:20,8,0,5:7,20:4,1|5,1|6,3:190.257:366.612,131.36:0.195027,0.195027:3.28507e-39,2.62655e-06,1.0	0/0:31:0.999933:7,7:7-7,7-7:17,10,0,4:7,17:5,3|6,1:188.688:326.675,113.385:0.0,0.0:2.69012e-33,3.3069e-05,0.99997
+chr1	3192934	.	TATATATATATATA	.	.	.	END=3192947;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:7,7:7-7,7-7:24,8,0,0:7,24:NULL:166.924:366.612,131.36:0.0,0.0:7.6252e-41,5.24495e-07,1.0	0/0:31:1.00001:7,7:7-7,7-7:22,8,0,0:7,22:NULL:161.681:326.675,113.385:0.139319,0.139319:1.59678e-37,2.31998e-06,1.0
+chr1	3193519	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3193554;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.896001:25,26:25-26,25-26:5,6,0,5:25,3|26,2:6,1|8,1|14,1|17,1|18,1:130.22:366.612,131.36:0.363246,0.374147:0.0,0.0,1.0	0/3:54:0.357509:18,28:18-22,19-29:6,24,0,20:17,2|18,4:6,2|9,3|10,4|11,2|12,1|14,1|15,1|16,1|17,1|18,2|20,1|28,1:421.12:326.675,113.385:1.11332,3.06777:6.2436e-31,8.09123e-05,0.999919
+chr1	3194182	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194229;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.881189:25,26:25-26,26-26:9,14,0,18:25,4|26,5:6,1|7,1|8,1|10,1|14,4|15,2|16,1|17,1|18,1|19,3|23,1|24,1:322.102:366.612,131.36:0.431574,0.0:4.54279e-23,0.000752893,0.999249	0/3:44:0.309339:24,28:17-25,17-28:3,13,0,24:24,3:5,1|9,1|12,1|13,1|14,3|15,3|17,4|18,2|20,2|21,1|22,1|23,2|24,1|28,1:323.096:326.675,113.385:1.47355,2.81063:2.01499e-19,5.77486e-05,0.999942
+chr1	3194304	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194333;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:44:0.281101:16,36:16-16,16-36:21,11,0,11:15,7|16,14:5,1|6,1|9,1|13,1|14,1|15,1|16,1|19,2|22,1|33,1:312.349:366.612,131.36:0.0,7.03249:0.0,9.98693e-29,1.0	0/3:39:0.303584:15,37:15-16,19-39:15,9,0,15:14,2|15,11|16,2:5,1|8,1|9,1|10,1|11,1|16,3|17,1|18,1|19,1|21,1|22,1|35,1|37,1:292.474:326.675,113.385:0.195027,4.9142:0.0,5.51792e-15,1.0
+chr1	3198131	.	AAAAAACAAAAAACAAAAAAC	AAAAAACAAAAAACAAAAAACAAAAAAC	.	.	END=3198151;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.379613:4,4:3-4,3-4:2,11,0,6:4,2:2,2|3,4:152.071:366.612,131.36:0.469019,0.469019:5.91913e-40,0.0394766,0.960594	0/0:21:0.999434:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.589:326.675,113.385:0.0,0.0:0.0,0.000348704,0.999652
+chr1	3207640	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3207663;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0797823:11,11:6-12,6-12:0,11,0,10:NULL:2,3|3,1|4,1|6,3|9,1|10,1:178.745:366.612,131.36:2.00988,2.00988:4.63405e-39,0.0583273,0.941757	0/0:34:0.985475:6,6:6-6,6-6:9,16,0,9:6,9:3,2|4,3|5,4:247.302:326.675,113.385:0.0,0.0:3.58493e-26,0.0070461,0.992971
+chr1	3209528	.	AAAAACAAAAACAAAAACAAAAAC	.	.	.	END=3209551;RU=aaaaac;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.916764:4,4:1-4,1-4:7,14,0,0:4,7:NULL:163.65:366.612,131.36:0.5093,0.5093:4.93839e-24,0.0720031,0.92809	0/0:35:1.00001:4,4:4-4,4-4:21,10,0,4:4,21:2,1|3,3:203.768:326.675,113.385:0.0,0.0:0.0,1.48659e-06,1.0
+chr1	3209577	.	AACAAAACAAAACAA	.	.	.	END=3209591;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999471:3,3:3-3,3-3:14,10,0,0:3,14:NULL:149.919:366.612,131.36:0.0,0.0:0.0,0.000357457,0.999644	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:195.055:326.675,113.385:0.0,0.0:0.0,3.04889e-07,1.0
+chr1	3212208	.	TATTTATTTATT	.	.	.	END=3212219;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999776:3,3:3-3,3-3:15,22,0,2:3,15:2,2:275.853:366.612,131.36:0.0,0.0:0.0,0.000127184,0.999873	0/0:27:0.999844:3,3:3-3,3-3:16,11,0,0:3,16:NULL:161.29:326.675,113.385:0.0,0.0:0.0,8.8955e-05,0.999911
+chr1	3219276	.	ATTATTATTATTATTATTATTATTATTATTATT	ATTATTATTATTATTATTATTATTATTATT	.	.	END=3219308;RU=att;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.993726:10,10:9-10,9-10:11,8,0,3:10,11:3,1|9,2:143.553:366.612,131.36:0.21692,0.21692:0.996844,0.00316656,1.55989e-15	0/0:13:0.652411:11,11:10-11,10-11:5,7,0,0:11,5:NULL:87.0853:326.675,113.385:0.486863,0.486863:2.85734e-08,0.237372,0.76265
+chr1	3224265	.	AAACAAACAAAC	.	.	.	END=3224276;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.555:366.612,131.36:0.0,0.0:0.0,3.11222e-06,1.0	0/0:31:0.999993:3,3:3-3,3-3:19,12,0,0:3,19:NULL:180.318:326.675,113.385:0.0,0.0:0.0,1.19101e-05,0.999987
+chr1	3229231	.	AACAAAACAAAACAAAACAAAACAA	AACAAAACAAAACAAAACAA	.	.	END=3229255;RU=aacaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.969771:4,4:4-4,4-4:9,9,0,0:4,9:NULL:117.579:366.612,131.36:0.0,0.0:0.990731,0.00929149,1.05996e-22	0/0:30:0.999593:5,5:5-5,5-5:14,8,0,8:5,14:2,1|3,2|4,5:184.138:326.675,113.385:0.0,0.0:1.17395e-36,0.000157612,0.999843
+chr1	3230661	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3230700;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0246166:29,29:18-29,18-29:0,9,0,6:NULL:11,1|12,1|17,1|20,1|22,1|27,1:132.661:366.612,131.36:2.88399,2.88399:3.81652e-23,0.111212,0.888885	1/0:40:0.977378:19,20:17-21,19-21:8,15,0,15:19,4|20,4:4,1|6,1|7,3|8,1|9,1|11,1|12,1|13,1|14,2|16,1|17,1|18,1:301.046:326.675,113.385:0.922547,0.601276:0.000508468,0.979059,0.0204738
+chr1	3247218	.	AAAACAAAACAAAAC	.	.	.	END=3247232;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999292:3,3:3-3,3-3:13,15,0,3:3,13:2,3:213.981:366.612,131.36:0.0,0.0:4.881e-42,0.000339974,0.99966	0/0:24:0.99952:3,3:3-3,3-3:14,8,0,2:3,14:2,2:141.793:326.675,113.385:0.0,0.0:6e-45,0.000223836,0.99978
+chr1	3248425	.	TTGCTTGCTTGCTTGC	.	.	.	END=3248440;RU=ttgc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:32,16,0,2:4,32:2,1|3,1:292.716:366.612,131.36:0.0,0.0:0.0,9.84893e-10,1.0	0/0:42:1.0:4,4:4-4,4-4:28,14,0,0:4,28:NULL:236.422:326.675,113.385:0.0,0.0:0.0,3.28777e-08,1.0
+chr1	3250571	.	ACCACCACCACCACC	ACCACCACCACC	.	.	END=3250585;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.0:4,4:4-4,4-4:21,18,0,0:4,21:NULL:250.656:366.612,131.36:0.0,0.0:1.0,2.14843e-06,0.0	0/0:40:1.0:5,5:4-5,4-5:27,12,0,0:5,27:NULL:215.956:326.675,113.385:0.169767,0.169767:0.0,8.70194e-08,1.0
+chr1	3256241	.	AAACAAACAAAC	.	.	.	END=3256252;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.187:366.612,131.36:0.0,0.0:0.0,1.7126e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:200.029:326.675,113.385:0.0,0.0:0.0,5.2323e-09,1.0
+chr1	3257455	.	GAAGAAGAAGAAGAA	.	.	.	END=3257469;RU=gaa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:23,11,0,3:5,23:4,3:216.8:366.612,131.36:0.0,0.0:0.0,4.39512e-07,1.0	0/0:38:1.0:5,5:5-5,5-5:30,8,0,0:5,30:NULL:194.078:326.675,113.385:0.0,0.0:0.0,1.01573e-08,1.0
+chr1	3263762	.	ACCCACCCACCC	.	.	.	END=3263773;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999996:3,3:3-3,3-3:20,15,0,0:3,20:NULL:218.28:366.612,131.36:0.0,0.0:0.0,1.16154e-05,0.999987	0/0:23:0.99999:3,3:3-3,3-3:18,5,0,0:3,18:NULL:118.308:326.675,113.385:0.0,0.0:0.0,1.72567e-05,0.999986
+chr1	3266661	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3266706;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.859583:16,17:16-18,15-18:6,10,0,5:16,4|17,2:6,1|14,2|15,2:158.259:366.612,131.36:0.702063,0.743564:1.0,0.0,0.0	0/0:42:0.969164:23,23:13-23,13-23:16,11,0,12:22,3|23,13:6,1|12,1|14,2|15,1|16,1|17,1|19,1|20,1|22,3:271.086:326.675,113.385:4.42132,4.42132:2.23068e-12,0.0300615,0.969994
+chr1	3266707	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3266746;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:33:0.271464:20,23:20-23,21-26:3,14,0,15:20,3:6,3|7,3|8,1|10,1|11,1|13,1|15,2|21,2|23,1:261.687:366.612,131.36:0.726627,1.33784:4.26235e-26,2.79685e-05,0.999972	0/1:38:0.307853:20,21:20-20,15-22:11,11,0,13:20,11:5,1|7,1|10,1|14,1|16,1|17,1|18,1|19,5|21,1:255.799:326.675,113.385:0.0,1.50169:6.83388e-24,2.67566e-08,1.0
+chr1	3283714	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=3283733;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998014:5,5:5-5,5-5:13,20,0,3:5,13:2,1|3,2:255.744:366.612,131.36:0.0,0.0:1.99649e-38,0.00152728,0.99848	0/0:36:1.0:5,5:4-5,4-5:19,10,0,6:5,19:2,1|3,1|4,4:218.899:326.675,113.385:0.311527,0.311527:0.0,8.6473e-06,0.999994
+chr1	3284144	.	AACCAACCAACC	.	.	.	END=3284155;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:276.757:366.612,131.36:0.0,0.0:0.0,3.40343e-08,1.0	0/0:22:0.999893:3,3:3-4,3-4:16,5,0,0:3,16:NULL:107.814:326.675,113.385:0.425627,0.425627:0.0,5.48176e-05,0.999948
+chr1	3284442	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3284483;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:47:0.804412:22,23:21-22,21-25:14,13,0,17:21,6|22,8:5,1|6,2|7,1|8,1|9,1|10,1|11,1|12,1|15,1|17,2|18,1|21,2|22,1|23,1:336.16:366.612,131.36:0.484441,1.48323:2.936e-42,1.0899e-08,1.0	0/3:42:0.302197:21,33:21-21,21-33:18,9,0,12:21,18:5,1|13,1|14,1|15,1|17,1|18,1|19,3|20,2|33,1:272.176:326.675,113.385:0.0,6.07264:2.65257e-24,2.95194e-07,1.0
+chr1	3284513	.	TGAATGAATGAATGAATGAATGAA	TGAATGAATGAATGAATGAATGAATGAA	.	.	END=3284536;RU=tgaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:0.999928:6,7:6-7,7-7:29,8,0,0:6,7|7,22:NULL:208.743:366.612,131.36:0.382696,0.0:0.0,2.17331e-12,1.0	0/0:41:1.0:6,6:6-6,6-6:26,10,0,5:6,26:2,1|3,2|5,2:234.8:326.675,113.385:0.0,0.0:0.0,7.37534e-08,1.0
+chr1	3286188	.	CATCATCATCAT	.	.	.	END=3286199;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:28,16,0,3:4,28:3,3:276.88:366.612,131.36:0.0,0.0:0.0,1.38019e-08,1.0	0/0:28:0.999774:4,4:4-4,4-4:15,11,0,2:4,15:3,2:169.069:326.675,113.385:0.0,0.0:0.0,0.000113157,0.999888
+chr1	3287342	.	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC,TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	.	.	END=3287441;RU=tctcc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0428838:8,8:1-8,1-8:0,3,0,3:NULL:7,1|8,2:47.3284:366.612,131.36:1.99367,1.99367:1.0,0.0,0.0	2/2:17:0.0230831:12,12:5-15,5-15:0,6,0,9:NULL:5,2|7,1|9,3|10,1|11,1|12,1:120.258:326.675,113.385:4.65146,4.65146:1.0,0.0,0.0
+chr1	3287445	.	TCCCCCTCCCCCTCCCCCTCCCCC	TCCCCCTCCCCCTCCCCCTCCCCCTCCCCC	.	.	END=3287468;RU=tccccc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.557197:5,5:5-5,5-5:4,2,0,0:5,4:NULL:34.0361:366.612,131.36:0.29703,0.29703:5.92393e-13,0.157841,0.842234	0/0:16:0.937132:4,4:4-4,4-4:8,8,0,0:4,8:NULL:109.373:326.675,113.385:0.29703,0.29703:6.49485e-17,0.047431,0.952645
+chr1	3287528	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=3287583;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:10:0.0290867:7,15:3-14,6-15:0,6,0,2:NULL:4,1|14,1:69.6104:366.612,131.36:3.94079,3.01377:6.41645e-08,0.806418,0.193633	0/0:24:0.869864:14,14:14-15,14-15:6,7,0,10:14,6:2,1|8,3|9,2|10,1|13,3:162.679:326.675,113.385:0.45695,0.45695:3.90143e-11,0.0418628,0.958209
+chr1	3298789	.	AAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	END=3298808;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999963:7,7:7-7,7-7:18,11,0,2:7,18:4,1|5,1:193.51:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:47:1.0:4,4:4-4,4-4:26,18,0,3:4,26:3,3:286.097:326.675,113.385:0.0,0.0:0.0,6.66746e-08,1.0
+chr1	3308941	.	AAAATAAAATAAAATAAAATAAAATAAAAT	AAAAT	.	.	END=3308970;RU=aaaat;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:14:0.959181:6,6:6-6,6-6:8,6,0,0:6,8:NULL:84.4534:326.675,113.385:0.0,0.0:8.40327e-25,0.0235629,0.976482
+chr1	3309296	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCT,TTCTTTCT	.	.	END=3309339;RU=ttct;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:11:0.0507287:1,2:1-2,1-2:0,11,0,0:NULL:NULL:95.391:366.612,131.36:0.499387,0.494455:0.718816,0.268655,0.0125524	0/0:18:0.950048:11,11:11-11,11-11:8,7,0,3:11,8:4,1|7,1|8,1:122.558:326.675,113.385:0.0,0.0:2.46773e-21,0.030773,0.969285
+chr1	3311045	.	AAGAAAAAGAAAAAGAAA	.	.	.	END=3311062;RU=aagaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.983812:3,3:3-3,3-3:9,16,0,0:3,9:NULL:183.474:366.612,131.36:0.0,0.0:2.32816e-26,0.0130668,0.986963	0/0:33:1.00001:3,3:3-3,3-3:22,9,0,2:3,22:2,2:180.68:326.675,113.385:0.0,0.0:0.0,1.03504e-06,1.0
+chr1	3317551	.	TAAATAAATAAA	.	.	.	END=3317562;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.60986:3,3:3-3,3-3:4,7,0,0:3,4:NULL:78.8406:366.612,131.36:0.0,0.0:5.51413e-12,0.183566,0.816501	0/0:8:0.469645:3,3:1-3,1-3:3,5,0,0:3,3:NULL:57.5009:326.675,113.385:0.339533,0.339533:2.24631e-09,0.263676,0.736329
+chr1	3317572	.	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	TA,TATATA	.	.	END=3317629;RU=ta;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.00216521:1,1:1-26,1-26:0,10,0,0:NULL:NULL:89.3505:366.612,131.36:6.01366,6.01366:0.64016,0.333863,0.0260525	2/2:2:0.00090688:3,3:1-3,1-3:0,2,0,0:NULL:NULL:19.0558:326.675,113.385:0.851255,0.851255:0.262426,0.580756,0.156859
+chr1	3317629	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3317664;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0145036:17,17:8-20,8-20:0,7,0,3:NULL:8,1|10,1|17,1:89.8084:366.612,131.36:4.75419,4.75419:0.228232,0.664371,0.107496	0/0:2:0.0227178:18,18:18-18,18-18:0,1,0,0:NULL:NULL:9.12935:326.675,113.385:0.0,0.0:0.187493,0.491102,0.321513
+chr1	3318469	.	TTTTGTTTTGTTTTG	.	.	.	END=3318483;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:2-3,2-3:23,21,0,0:3,23:NULL:290.045:366.612,131.36:0.253975,0.253975:0.0,9.8791e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:233.804:326.675,113.385:0.0,0.0:0.0,1.73051e-07,1.0
+chr1	3319830	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3319850;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999884:7,7:7-7,7-7:17,8,0,0:7,17:NULL:143.581:366.612,131.36:0.0,0.0:6e-45,7.1866e-05,0.999932	0/0:29:0.999541:7,7:7-7,7-7:14,11,0,4:7,14:4,1|5,1|6,2:186.226:326.675,113.385:0.0,0.0:2.56804e-37,0.000211661,0.999789
+chr1	3325716	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3325743;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:15:0.0305249:12,13:1-15,1-15:0,12,0,3:NULL:4,1|7,1|12,1:134.041:366.612,131.36:4.67388,4.71352:0.51569,0.449359,0.0350738	0/0:15:0.659866:14,14:14-14,14-14:5,10,0,0:14,5:NULL:112.97:326.675,113.385:0.29703,0.29703:2.65894e-06,0.2113,0.78875
+chr1	3327145	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3327194;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.453927:21,21:21-22,21-22:3,11,0,10:21,3:4,2|8,1|12,1|13,1|17,1|18,2|20,2:196.883:366.612,131.36:0.294378,0.294378:1.0,0.0,0.0	0/2:36:0.289986:25,28:24-25,23-28:10,8,0,17:23,2|25,8:5,2|7,1|8,1|10,1|12,1|13,1|14,3|15,1|16,1|17,1|21,1|23,1|24,1|28,1:268.127:326.675,113.385:0.240494,2.03792:2.52992e-12,1.94684e-05,0.99998
+chr1	3327251	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=3327290;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.950032:14,14:13-14,13-14:8,11,0,12:14,8:7,3|8,2|9,2|10,2|11,1|12,1|13,1:223.195:366.612,131.36:0.44763,0.44763:0.0,0.0,1.0	0/0:34:1.0:10,10:10-11,10-11:19,6,0,7:10,19:2,1|5,1|9,5:185.78:326.675,113.385:0.270063,0.270063:7.3456e-41,6.86667e-06,0.999994
+chr1	3339592	.	GAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=3339611;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0383828:8,8:8-10,8-10:0,8,0,0:NULL:NULL:75.7368:366.612,131.36:0.957892,0.957892:0.256004,0.503285,0.24073	0/0:23:0.991072:10,10:10-11,10-11:11,8,0,2:10,11:5,1|7,1:134.709:326.675,113.385:0.442343,0.442343:7.4509e-22,0.00419897,0.99581
+chr1	3339980	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=3340011;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999475:9,9:9-9,9-9:14,12,0,11:9,14:3,3|4,1|5,1|6,1|7,1|8,4:249.953:366.612,131.36:0.0,0.0:0.0,2.18235e-05,0.999979	0/0:27:0.999453:8,8:8-8,8-8:14,9,0,4:8,14:5,1|6,1|7,2:163.819:326.675,113.385:0.0,0.0:1.3722e-41,0.000249176,0.999751
+chr1	3340203	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=3340226;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.995765:5,5:5-5,5-5:12,15,0,0:5,12:NULL:185.688:366.612,131.36:0.0,0.0:0.998877,0.00112576,2.65565e-31	0/0:24:0.992594:6,6:6-6,6-6:10,10,0,4:6,10:3,2|5,2:158.865:326.675,113.385:0.0,0.0:2.79459e-24,0.00326886,0.996739
+chr1	3342039	.	CATGCATGCATG	.	.	.	END=3342050;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.75824:3,3:3-3,3-3:5,6,0,0:3,5:NULL:72.7852:366.612,131.36:0.0,0.0:3.67506e-17,0.125749,0.874349	0/0:11:0.955581:3,3:3-3,3-3:8,3,0,0:3,8:NULL:61.7549:326.675,113.385:0.0,0.0:8.05459e-27,0.0209154,0.979125
+chr1	3342663	.	ATAAATAAATAA	.	.	.	END=3342674;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.015:366.612,131.36:0.0,0.0:7.638e-42,1.64445e-06,1.0	0/0:25:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:133.089:326.675,113.385:0.0,0.0:2.13385e-34,2.63915e-05,0.999978
+chr1	3355412	.	ATGTATGTATGT	.	.	.	END=3355423;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:332.388:366.612,131.36:0.0,0.0:0.0,1.13867e-08,1.0	0/0:46:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:278.085:326.675,113.385:0.0,0.0:0.0,6.5236e-08,1.0
+chr1	3357227	.	TTATTTATTTAT	.	.	.	END=3357238;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,13,0,3:3,30:2,3:259.516:366.612,131.36:0.0,0.0:0.0,2.25091e-09,1.0	0/0:29:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.327:326.675,113.385:0.0,0.0:0.0,6.20079e-07,1.0
+chr1	3360114	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3360159;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.156806:26,26:22-26,22-26:2,11,0,9:26,2:4,1|5,1|7,1|11,1|12,1|15,1|18,2|19,1:183.118:366.612,131.36:1.29813,1.29813:1.00743e-06,0.171728,0.828341	0/0:37:0.636893:23,23:21-24,21-24:5,12,0,17:23,5:4,1|7,1|8,1|9,1|10,1|11,1|12,2|14,3|15,1|16,2|19,1|20,1|21,1:271.022:326.675,113.385:0.905494,0.905494:7.81328e-06,0.17981,0.820249
+chr1	3361293	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3361348;RU=ct;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.988165:17,18:15-17,15-18:8,21,0,3:17,5|18,3:5,1|6,1|11,1:254.984:366.612,131.36:0.447192,0.872412:1.0,0.0,0.0	0/0:34:0.931998:28,28:27-29,27-29:8,11,0,13:28,8:5,1|12,2|15,1|16,1|18,1|19,1|21,1|24,3|25,1|27,1:244.907:326.675,113.385:0.48807,0.48807:4.27324e-11,0.032789,0.967271
+chr1	3361348	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3361393;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.332648:30,35:23-30,23-36:4,20,0,16:30,4:7,1|11,1|12,1|14,1|17,1|18,1|19,1|20,3|22,1|24,1|25,1|28,1|31,1|35,1:338.187:366.612,131.36:2.4871,3.85048:0.0,1.165e-10,1.0	0/0:40:0.979008:23,23:20-23,20-23:9,15,0,14:23,9:5,1|6,1|7,1|9,1|10,1|11,1|12,1|13,2|14,2|18,1|22,2:290.388:326.675,113.385:1.18481,1.18481:2.84686e-16,0.0140861,0.985942
+chr1	3365708	.	TTTCTTTCTTTC	TTTC	.	.	END=3365719;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.31096:1,3:1-1,1-6:11,17,0,3:1,11:2,1|3,2:222.859:366.612,131.36:0.0,0.849641:6.25475e-16,1.0,1.7818e-41	0/0:24:0.999884:3,3:3-3,3-3:16,5,0,3:3,16:2,3:132.662:326.675,113.385:0.0,0.0:1.3774e-39,4.05224e-05,0.999963
+chr1	3365944	.	TGTGTGTGTGTG	.	.	.	END=3365955;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999788:6,6:6-6,6-6:15,12,0,4:6,15:5,4:193.16:366.612,131.36:0.0,0.0:5.2e-44,8.18518e-05,0.999918	0/0:35:1.00001:6,6:6-6,6-6:20,13,0,2:6,20:5,2:212.768:326.675,113.385:0.0,0.0:0.0,3.18577e-06,1.0
+chr1	3386948	.	TCTTTCTTTCTT	.	.	.	END=3386959;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.997909:3,3:3-3,3-3:12,17,0,0:3,12:NULL:198.545:366.612,131.36:0.0,0.0:4.33761e-40,0.00135655,0.998648	0/0:28:0.999936:3,3:3-3,3-3:17,11,0,0:3,17:NULL:170.847:326.675,113.385:0.0,0.0:0.0,4.5359e-05,0.999956
+chr1	3388595	.	ACTTCACTTCACTTC	.	.	.	END=3388609;RU=acttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.848:366.612,131.36:0.0,0.0:0.0,1.35613e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:232.247:326.675,113.385:0.0,0.0:0.0,1.93775e-06,1.0
+chr1	3390191	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTC	.	.	END=3390216;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:0.999474:5,13:3-13,13-13:23,9,0,0:3,2|5,3|13,18:NULL:203.98:366.612,131.36:1.7577,0.0:1.83634e-33,1.0,1.91746e-09	0/0:46:0.999873:13,13:12-13,12-13:30,8,0,7:12,4|13,26:5,1|7,1|10,1|11,3|12,1:265.253:326.675,113.385:0.236383,0.236383:7.1e-44,0.00012746,0.999873
+chr1	3393075	.	ACACACACACACAC	.	.	.	END=3393088;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:24,15,0,8:7,24:5,4|6,4:291.55:366.612,131.36:0.0,0.0:0.0,2.26844e-07,1.0	0/0:47:1.0:7,7:7-7,7-7:25,19,0,2:7,25:6,2:296.677:326.675,113.385:0.0990099,0.0990099:0.0,3.55528e-07,1.0
+chr1	3395163	.	AAGAAAGAAAGA	.	.	.	END=3395174;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.847:366.612,131.36:0.0,0.0:0.0,9.82503e-06,0.999993	0/0:35:1.0:3,3:3-3,3-3:18,14,0,3:3,18:2,3:217.461:326.675,113.385:0.0,0.0:0.0,9.75855e-06,0.999993
+chr1	3403481	.	TATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATA	.	.	END=3403498;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.165483:20,20:16-20,16-20:2,9,0,0:20,2:NULL:99.2001:366.612,131.36:1.26066,1.26066:0.0,0.0,1.0	0/0:21:0.956424:9,9:8-9,8-9:9,11,0,0:9,9:NULL:138.289:326.675,113.385:0.21692,0.21692:5.35994e-12,0.0302066,0.969851
+chr1	3403725	.	ACCACCACCACC	.	.	.	END=3403736;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:27,18,0,0:4,27:NULL:262.147:366.612,131.36:0.0,0.0:0.0,9.58616e-08,1.0	0/0:48:1.0:4,4:4-4,4-4:33,15,0,0:4,33:NULL:271.867:326.675,113.385:0.0,0.0:0.0,1.89479e-09,1.0
+chr1	3405593	.	TATTTATTTATT	.	.	.	END=3405604;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:22,15,0,2:3,22:2,2:234.717:366.612,131.36:0.0,0.0:0.0,6.5924e-07,1.0	0/0:23:0.999792:3,3:3-3,3-3:15,6,0,2:3,15:2,2:129.67:326.675,113.385:0.0,0.0:0.0,8.11512e-05,0.999919
+chr1	3405717	.	AACAACAACAAC	.	.	.	END=3405728;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:23,24,0,2:4,23:3,2:320.549:366.612,131.36:0.0,0.0:0.0,4.37449e-07,1.0	0/0:32:0.999896:4,4:4-4,4-4:16,12,0,4:4,16:3,4:203.848:326.675,113.385:0.0,0.0:0.0,5.05573e-05,0.999949
+chr1	3407095	.	AAAATAAAATAAAAT	.	.	.	END=3407109;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:140.173:366.612,131.36:0.0,0.0:0.0,7.06878e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:27,14,0,2:3,27:2,2:251.859:326.675,113.385:0.0,0.0:0.0,3.11129e-08,1.0
+chr1	3408522	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	END=3408561;RU=gaaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.65855:14,14:12-14,12-14:5,16,0,8:14,5:5,2|6,1|7,1|8,1|12,2|13,1:242.678:366.612,131.36:0.581383,0.581383:0.0,0.0,1.0	0/0:41:0.824507:10,10:9-10,9-10:14,19,0,8:9,2|10,12:7,1|8,2|9,5:296.651:326.675,113.385:0.469019,0.469019:6.06932e-23,0.175327,0.824741
+chr1	3408702	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3408745;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.744024:21,21:20-22,20-22:9,10,0,12:20,2|21,7:8,1|9,1|10,2|11,1|12,3|15,1|17,1|18,1|19,1:231.355:366.612,131.36:0.579863,0.579863:0.970769,0.0292858,4.61147e-07	0/0:40:0.99681:22,22:22-23,22-23:13,11,0,15:22,13:4,1|6,1|7,1|8,1|9,3|12,1|14,1|15,2|16,2|19,1|21,1:274.457:326.675,113.385:0.284901,0.284901:2.11754e-16,0.000787401,0.999217
+chr1	3412976	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3413019;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:47:0.266334:24,28:22-25,17-31:9,24,0,12:22,2|24,7:4,1|7,1|10,1|12,1|15,2|17,1|21,1|23,2|25,1|28,1:373.177:366.612,131.36:1.01145,3.92624:1.8091e-41,2.66864e-13,1.0	0/1:36:0.371156:22,24:21-24,21-24:4,17,0,15:21,2|22,2:6,1|7,1|9,1|11,2|12,1|13,1|15,1|16,1|19,1|21,2|22,2|24,1:301.446:326.675,113.385:0.661813,1.29601:9.28366e-23,0.0855846,0.914515
+chr1	3413022	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3413083;RU=tc;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.026846:1,1:1-6,1-6:0,28,0,0:NULL:NULL:246.2:366.612,131.36:1.43779,1.43779:0.994656,0.00535392,5.58523e-07	2/0:30:0.663264:29,31:29-31,30-31:8,16,0,6:29,3|30,2|31,3:5,1|10,1|14,1|23,1|26,1|31,1:243.069:326.675,113.385:0.638134,0.284901:1.47557e-10,0.955712,0.0443579
+chr1	3413143	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=3413186;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.98753:13,13:13-13,13-13:10,20,0,2:13,10:8,1|13,1:243.265:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:28:0.718486:22,22:21-22,21-22:5,13,0,9:22,5:5,1|7,1|11,2|12,1|18,1|19,1|20,1|21,1:216.602:326.675,113.385:0.442564,0.442564:1.43829e-06,0.128759,0.871339
+chr1	3415813	.	TAAATAAATAAA	.	.	.	END=3415824;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999965:3,3:2-3,2-3:18,12,0,0:3,18:NULL:174.415:366.612,131.36:0.431574,0.431574:0.0,3.20106e-05,0.999971	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.329:326.675,113.385:0.0,0.0:0.0,2.02195e-06,1.0
+chr1	3418452	.	ATGTATGTATGT	.	.	.	END=3418463;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:39,18,0,2:3,39:2,2:334.767:366.612,131.36:0.0,0.0:0.0,9.76423e-12,1.0	0/0:27:0.999963:3,3:3-3,3-3:18,9,0,0:3,18:NULL:159.97:326.675,113.385:0.0,0.0:0.0,2.95723e-05,0.999971
+chr1	3419362	.	CCTACCTACCTA	.	.	.	END=3419373;RU=ccta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:35,18,0,3:3,35:2,3:320.414:366.612,131.36:0.0,0.0:0.0,9.58282e-11,1.0	0/0:35:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:168.082:326.675,113.385:0.0,0.0:0.0,9.83807e-09,1.0
+chr1	3427014	.	TATCTATCTATC	.	.	.	END=3427025;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999856:3,3:3-3,3-3:16,23,0,0:3,16:NULL:269.899:366.612,131.36:0.0,0.0:0.0,0.000120938,0.99988	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.991:326.675,113.385:0.0,0.0:0.0,3.03433e-07,1.0
+chr1	3437788	.	AAACAAACAAAC	.	.	.	END=3437799;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,17,0,0:3,37:NULL:298.755:366.612,131.36:0.0,0.0:0.0,8.48512e-11,1.0	0/0:38:1.0:3,3:3-3,3-3:28,8,0,2:3,28:2,2:198.144:326.675,113.385:0.0,0.0:0.0,8.29792e-09,1.0
+chr1	3440889	.	AATAAATAAATA	.	.	.	END=3440900;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:32,10,0,0:3,32:NULL:214.287:366.612,131.36:0.0,0.0:0.0,1.03455e-09,1.0	0/0:25:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:119.376:326.675,113.385:0.0,0.0:0.0,2.36557e-06,1.0
+chr1	3442170	.	CCACCACCACCACCA	CCACCACCACCA	.	.	END=3442184;RU=cca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.188092:4,4:1-4,1-4:2,26,0,0:4,2:NULL:236.847:366.612,131.36:0.944183,0.944183:0.8773,0.122763,3.51555e-05	0/0:26:0.993269:5,5:5-5,5-5:11,15,0,0:5,11:NULL:183.557:326.675,113.385:0.0,0.0:4.64275e-28,0.00515572,0.994858
+chr1	3444468	.	AAGGAAGGAAGGAAGG	.	.	.	END=3444483;RU=aagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:21,22,0,0:4,21:NULL:283.756:366.612,131.36:0.0,0.0:0.0,6.78867e-06,0.999994	0/0:30:1.0:4,4:4-4,4-4:20,10,0,0:4,20:NULL:165.675:326.675,113.385:0.0,0.0:0.0,9.72115e-06,0.999993
+chr1	3452271	.	TTTGTTTGTTTG	.	.	.	END=3452282;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999857:3,3:3-3,3-3:16,14,0,0:3,16:NULL:192.804:366.612,131.36:0.0,0.0:0.0,0.000103879,0.999896	0/0:31:1.0:3,3:3-3,3-3:27,4,0,0:3,27:NULL:140.314:326.675,113.385:0.0,0.0:0.0,3.06181e-08,1.0
+chr1	3452589	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=3452612;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.466473:4,4:1-4,1-4:4,14,0,0:4,4:NULL:151.644:366.612,131.36:0.948533,0.948533:2.53305e-10,0.412736,0.587339	0/0:37:1.0:4,4:3-4,3-4:24,12,0,0:4,24:NULL:204.184:326.675,113.385:0.270063,0.270063:0.0,7.76877e-07,1.0
+chr1	3459217	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	END=3459272;RU=atct;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:1.0:13,13:13-13,13-13:20,22,0,19:13,20:2,1|4,3|5,1|6,2|7,3|9,3|10,1|11,3|12,2:426.507:366.612,131.36:0.0,0.0:1.0,2.32162e-06,3.05588e-32	0/0:67:0.999734:14,14:14-14,14-14:15,29,0,23:14,15:2,2|4,2|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2|13,4:499.709:326.675,113.385:0.0,0.0:2.04347e-33,0.00020263,0.999797
+chr1	3460396	.	GGGACGGGACGGGAC	.	.	.	END=3460410;RU=gggac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.469102:3,3:1-3,1-3:3,8,0,0:3,3:NULL:84.2472:366.612,131.36:0.472766,0.472766:9.34441e-11,0.268776,0.731226	0/0:14:0.990023:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6133:326.675,113.385:0.0,0.0:6.37805e-33,0.00536677,0.994647
+chr1	3462940	.	GTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=3462963;RU=gttt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.997688:10,10:10-10,10-10:12,12,0,8:10,12:2,1|3,2|5,1|6,3|8,1:219.73:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:44:0.999933:6,6:6-6,6-6:16,21,0,7:6,16:3,3|4,1|5,3:303.228:326.675,113.385:0.0,0.0:0.0,4.7846e-05,0.999955
+chr1	3470981	.	CACACACACACACACACACACACA	CA,CACACACACACACA	.	.	END=3471004;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:7:0.00609839:1,7:1-15,1-15:0,7,0,0:NULL:NULL:66.3926:366.612,131.36:4.33019,4.14174:0.229482,0.554589,0.215959	0/0:37:0.997233:12,12:10-12,10-12:12,11,0,12:12,12:6,2|7,1|9,3|10,3|11,3:246.658:326.675,113.385:0.422855,0.422855:8.55909e-17,0.00120403,0.9988
+chr1	3478864	.	ACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=3478881;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.995329:10,10:10-10,10-10:11,13,0,2:10,11:4,1|9,1:180.777:366.612,131.36:0.0,0.0:4.37525e-40,0.0012587,0.998747	0/0:23:0.455559:9,9:8-9,8-9:12,7,0,4:8,2|9,10:6,1|8,3:155.419:326.675,113.385:0.491073,0.491073:7.61899e-16,0.543848,0.456264
+chr1	3481278	.	TTTGTTTGTTTGTTTG	.	.	.	END=3481293;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999981:4,4:4-5,4-5:19,15,0,0:4,19:NULL:218.731:366.612,131.36:0.334882,0.334882:0.0,3.05595e-05,0.999971	0/0:42:1.0:4,4:4-4,4-4:28,8,0,6:4,28:3,6:224.482:326.675,113.385:0.0,0.0:0.0,8.98187e-09,1.0
+chr1	3483580	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3483607;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.919819:19,19:5-20,5-20:18,23,0,8:18,2|19,14|20,2:5,1|6,1|9,1|10,1|14,1|17,2|19,1:371.263:366.612,131.36:6.99379,6.99379:0.0,3.84008e-05,0.999963	0/0:67:0.999998:14,14:14-14,14-14:40,15,0,12:12,3|13,4|14,31|15,2:4,1|5,1|6,4|7,1|8,1|10,1|11,1|13,2:431.313:326.675,113.385:0.19802,0.19802:1.95358e-39,5.81579e-06,0.999995
+chr1	3487177	.	CCATCCATCCAT	.	.	.	END=3487188;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:26,22,0,0:3,26:NULL:300.483:366.612,131.36:0.0,0.0:0.0,8.36725e-08,1.0	0/0:35:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:211.739:326.675,113.385:0.0,0.0:0.0,4.44959e-06,0.999995
+chr1	3487959	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3487988;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.918849:10,12:9-12,12-12:14,17,0,3:9,2|10,3|12,9:8,1|9,1|10,1:257.849:366.612,131.36:1.08161,0.0:1.0,3.86238e-06,1.11061e-21	0/0:33:0.984228:15,15:15-16,15-16:10,16,0,6:15,10:5,1|8,1|12,1|14,2|15,1:242.817:326.675,113.385:0.270063,0.270063:5.38519e-19,0.0034699,0.996541
+chr1	3487988	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATA	.	.	END=3488019;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.758499:10,11:10-14,10-14:4,18,0,0:10,2|11,2:NULL:187.38:366.612,131.36:1.91717,1.5352:0.993196,0.00682201,1.22632e-09	0/0:22:0.944694:16,16:15-17,15-17:9,10,0,0:16,9:NULL:136.375:326.675,113.385:0.4771,0.4771:1.98586e-11,0.0365298,0.963536
+chr1	3490427	.	GCGCGCGCGCGCGC	GCGCGCGCGCGC	.	.	END=3490440;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.0:6,6:6-6,6-6:25,20,0,0:6,25:NULL:282.87:366.612,131.36:0.0990099,0.0990099:1.0,1.37667e-07,2.663e-41	0/0:46:1.0:7,7:7-7,7-7:30,15,0,0:7,30:NULL:258.92:326.675,113.385:0.278639,0.278639:4.9453e-41,1.68511e-08,1.0
+chr1	3491872	.	CACACACACACA	CACACACACA,CACACACACACACACA	.	.	END=3491883;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:18:0.227788:8,8:7-8,7-8:2,15,0,0:8,2:NULL:141.248:366.612,131.36:0.59948,0.59948:2.72633e-08,0.258838,0.741169	1/0:25:0.986961:5,6:5-6,6-6:7,18,0,0:5,2|6,5:NULL:198.102:326.675,113.385:0.452422,0.0:5.90355e-10,0.98821,0.0118178
+chr1	3494930	.	CATTCATTCATTCATTCATTCATT	.	.	.	END=3494953;RU=catt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997386:6,6:6-6,6-6:12,9,0,5:6,12:3,2|4,2|5,1:167.591:366.612,131.36:0.0,0.0:3.95949e-32,0.00131093,0.998694	0/0:47:1.00001:6,6:6-6,6-6:22,15,0,10:6,22:3,4|4,4|5,2:295.517:326.675,113.385:0.0,0.0:0.0,1.17652e-06,1.0
+chr1	3496471	.	TTCTTTTCTTTTCTT	.	.	.	END=3496485;RU=ttctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:260.674:366.612,131.36:0.0,0.0:0.0,5.47066e-07,1.0	0/0:21:0.997268:3,3:1-3,1-3:12,8,0,0:3,12:NULL:120.166:326.675,113.385:0.991682,0.991682:7.039e-42,0.00157585,0.998429
+chr1	3496603	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3496632;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:54:0.283637:22,29:22-22,21-29:15,11,0,25:21,4|22,11:5,1|8,1|9,1|11,1|12,1|13,2|14,1|15,2|16,4|17,4|18,2|19,1|20,2|21,1|27,1:382.349:366.612,131.36:0.0,3.54444:0.0,0.0,1.0	0/0:29:0.984143:15,15:14-16,14-16:16,6,0,6:14,3|15,13:5,1|6,1|9,1|11,2|14,1:177.115:326.675,113.385:0.281439,0.281439:8.76319e-15,0.0152588,0.984773
+chr1	3499569	.	ACCCACCCACCC	ACCCACCCACCCACCCACCC	.	.	END=3499580;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:3:0.00263713:3,5:1-15,1-15:0,3,0,0:NULL:NULL:27.7607:366.612,131.36:5.93652,5.79452:0.00457848,0.154971,0.840537	0/0:18:0.997556:3,3:3-3,3-3:12,6,0,0:3,12:NULL:97.0083:326.675,113.385:0.0,0.0:3.21421e-31,0.00127003,0.998733
+chr1	3507557	.	ACAGACAGACAGACAGACAG	.	.	.	END=3507576;RU=acag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.99109:5,5:4-5,4-5:11,5,0,0:5,11:NULL:87.6499:366.612,131.36:0.437216,0.437216:3.1104e-29,0.00586497,0.99415	0/0:33:0.999946:5,5:5-5,5-5:17,11,0,5:5,17:3,1|4,4:205.65:326.675,113.385:0.0,0.0:1.1e-44,2.35347e-05,0.999979
+chr1	3507759	.	AACAACAACAAC	.	.	.	END=3507770;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999806:4,4:4-4,4-4:16,2,0,0:4,16:NULL:81.2805:366.612,131.36:0.0,0.0:0.0,0.000112515,0.999888	0/0:35:1.0:4,4:4-4,4-4:23,9,0,3:4,23:3,3:195.863:326.675,113.385:0.0,0.0:0.0,3.21403e-07,1.0
+chr1	3509243	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3509290;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:0.901943:24,24:23-25,23-25:20,17,0,15:23,4|24,13|25,3:8,1|11,1|14,2|15,1|17,2|18,1|19,2|21,2|22,1|23,2:377.082:366.612,131.36:0.474835,0.474835:3.69924e-13,0.0100262,0.989998	0/0:35:0.889263:24,24:24-25,24-25:10,11,0,13:23,2|24,8:5,1|7,1|8,1|10,2|13,1|16,1|18,1|19,1|22,1|23,3:253.622:326.675,113.385:0.275098,0.275098:9.72665e-08,0.0958738,0.904227
+chr1	3509605	.	AAACAAAACAAAACA	.	.	.	END=3509619;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999867:3,3:3-3,3-3:16,7,0,0:3,16:NULL:126.671:366.612,131.36:0.0,0.0:0.0,6.98466e-05,0.999933	0/0:19:0.999027:3,3:3-3,3-3:13,6,0,0:3,13:NULL:106.151:326.675,113.385:0.0,0.0:1.49e-43,0.000556877,0.999446
+chr1	3510223	.	AAATAAATAAAT	.	.	.	END=3510234;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:164.508:366.612,131.36:0.0,0.0:0.0,6.1897e-06,0.999995	0/0:28:0.999264:3,3:3-3,3-3:13,12,0,3:3,13:2,3:182.213:326.675,113.385:0.0,0.0:2.11445e-40,0.000337643,0.999666
+chr1	3518996	.	TATTATTATTATTATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTATTATTAT	.	.	END=3519034;RU=tat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.996552:12,12:10-12,10-12:12,10,0,8:12,12:3,1|4,1|7,2|10,3|11,1:200.993:366.612,131.36:0.647134,0.647134:0.998178,0.0018276,7.66627e-17	0/0:27:0.95199:13,13:13-14,13-14:8,10,0,8:13,8:4,1|5,1|6,1|7,1|9,1|11,1|12,2:187.125:326.675,113.385:0.46122,0.46122:2.83563e-14,0.0151482,0.984883
+chr1	3519121	.	ACTCACTCACTC	.	.	.	END=3519132;RU=actc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:219.554:366.612,131.36:0.0,0.0:0.0,7.08751e-07,1.0	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:172.558:326.675,113.385:0.0,0.0:0.0,4.38183e-07,1.0
+chr1	3523067	.	TAATAATAATAATAATAATAATAATAA	TAA	.	.	END=3523093;RU=taa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.039164:1,1:1-5,1-5:0,13,0,0:NULL:NULL:123.852:366.612,131.36:1.14834,1.14834:0.581722,0.376272,0.0421281	0/0:38:0.461444:9,9:9-10,9-10:20,11,0,7:9,17|10,3:5,1|6,1|7,2|8,3:250.211:326.675,113.385:0.499387,0.499387:4.041e-34,3.47245e-06,1.0
+chr1	3527389	.	CATCCATCCATC	.	.	.	END=3527400;RU=catc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:230.582:366.612,131.36:0.0,0.0:0.0,1.79127e-08,1.0	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:317.531:326.675,113.385:0.0,0.0:0.0,1.12177e-10,1.0
+chr1	3529807	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAATAAATAAATAAAT	.	.	END=3529850;RU=aaat;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999979:9,9:9-9,9-9:18,11,0,8:9,18:3,1|4,1|5,1|6,2|8,3:233.364:366.612,131.36:0.0,0.0:0.999993,1.06837e-05,6.47422e-38	0/0:28:0.999428:11,11:11-11,11-11:14,8,0,6:11,14:3,1|5,1|7,1|9,2|10,1:177.812:326.675,113.385:0.0,0.0:4.52009e-32,0.000279724,0.999721
+chr1	3530404	.	TATTATTATTATTATTATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT	.	.	END=3530445;RU=tat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.901029:17,17:17-17,17-17:7,11,0,10:17,7:4,1|7,2|8,1|12,2|13,1|15,2|16,1:203.867:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:42:0.992469:14,14:14-15,14-15:11,18,0,12:14,11:3,2|5,1|6,1|7,3|8,1|11,3|13,1:304.679:326.675,113.385:0.298675,0.298675:2.55207e-16,0.00392428,0.996088
+chr1	3537894	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3537913;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.385014:15,15:13-15,13-15:3,9,0,5:15,3:5,1|7,1|12,2|14,1:137.424:366.612,131.36:0.921165,0.921165:0.0,0.0,1.0	0/0:28:0.975432:10,10:9-11,9-11:15,8,0,4:9,2|10,13:5,1|7,1|8,1|9,1:171.686:326.675,113.385:0.43384,0.43384:2.5878e-18,0.0243184,0.975727
+chr1	3540990	.	TGTTGTTGTTGTTGT	.	.	.	END=3541004;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999861:5,5:5-5,5-5:16,16,0,2:5,16:4,2:226.904:366.612,131.36:0.0,0.0:0.0,7.16376e-05,0.999932	0/0:47:1.0:5,5:5-5,5-5:31,13,0,3:5,31:4,3:261.497:326.675,113.385:0.0,0.0:0.0,1.72273e-09,1.0
+chr1	3541012	.	TTGTTTTTTGTTTTTTGTTTT	TTGTTTTTTGTTTT	.	.	END=3541032;RU=ttgtttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999509:2,2:2-2,2-2:13,13,0,0:2,13:NULL:172.491:366.612,131.36:0.0,0.0:0.999758,0.000244667,2.76786e-40	0/0:40:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:225.609:326.675,113.385:0.0,0.0:0.0,7.44215e-08,1.0
+chr1	3554787	.	GTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGT	.	.	END=3554802;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.999986:9,9:9-9,9-9:18,12,0,7:9,18:6,1|7,2|8,4:237.054:366.612,131.36:0.139319,0.139319:0.0,5.68972e-07,1.0	0/0:49:0.98132:8,8:8-17,8-17:31,13,0,5:8,31:5,1|6,1|7,2|15,1:304.298:326.675,113.385:3.80811,3.80811:0.0,2.92854e-09,1.0
+chr1	3555544	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3555593;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:44:0.362242:21,23:21-21,22-24:8,16,0,19:21,8:5,1|6,1|8,1|10,1|11,1|12,4|13,2|15,3|19,2|22,2|23,1:343.558:366.612,131.36:0.0990099,0.615138:0.636692,0.363356,8.41314e-18	0/3:22:0.260705:25,27:22-25,22-27:2,8,0,10:25,2:8,1|10,2|12,1|13,1|18,1|19,1|22,1|24,1|27,1:166.814:326.675,113.385:1.14218,1.93736:2.32776e-09,0.0255083,0.974539
+chr1	3559181	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=3559216;RU=tc;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.539656:8,8:6-8,6-8:5,17,0,0:8,5:NULL:177.717:366.612,131.36:0.472766,0.472766:1.0,0.0,0.0	0/0:21:0.766734:18,18:16-18,16-18:6,8,0,5:18,6:5,2|12,1|14,1|16,1:138.427:326.675,113.385:0.74567,0.74567:7.06198e-09,0.110577,0.889519
+chr1	3559217	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3559264;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.831844:8,13:8-24,11-24:7,10,0,2:8,3|11,2|13,2:6,1|7,1:146.703:366.612,131.36:6.53897,4.86742:1.0,2.25946e-06,4.52011e-29	0/3:31:0.274637:24,32:24-25,24-33:4,8,0,18:24,4:5,1|7,1|9,2|11,1|12,1|14,3|16,2|19,1|20,2|22,1|23,1|25,1|32,1:237.468:326.675,113.385:0.412766,3.4929:4.38113e-20,9.92807e-07,1.0
+chr1	3559288	.	TCTCTCTCTCTC	.	.	.	END=3559299;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999953:6,6:6-6,6-6:18,12,0,0:6,18:NULL:183.101:366.612,131.36:0.0,0.0:1.7e-44,5.04122e-05,0.999949	0/0:38:0.983739:6,6:6-16,6-16:32,4,0,2:6,32:5,1|14,1:195.327:326.675,113.385:3.76974,3.76974:0.0,1.15641e-09,1.0
+chr1	3560915	.	AAACAAACAAACAAACAAAC	.	.	.	END=3560934;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999839:5,5:5-5,5-5:15,19,0,4:5,15:3,1|4,3:259.872:366.612,131.36:0.0,0.0:0.0,8.33776e-05,0.999918	0/0:39:1.0:5,5:5-5,5-5:23,12,0,4:5,23:4,3|5,1:230.346:326.675,113.385:0.0,0.0:0.0,2.06752e-07,1.0
+chr1	3567195	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3567244;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.815539:25,25:22-25,22-25:9,6,0,9:24,2|25,7:4,1|5,1|10,1|11,2|13,1|16,1|17,1|22,1:170.884:366.612,131.36:1.1105,1.1105:3.3225e-09,0.143123,0.85696	0/1:23:0.573095:25,26:10-25,10-26:6,8,0,7:24,2|25,4:6,1|7,1|8,1|14,1|17,1|21,1|26,1:169.038:326.675,113.385:7.14562,7.63548:2.708e-11,0.0172721,0.982767
+chr1	3568471	.	GATGGATGGATG	.	.	.	END=3568482;RU=gatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999924:3,3:3-3,3-3:16,15,0,2:3,16:2,2:214.124:366.612,131.36:0.0,0.0:0.0,4.05373e-05,0.999963	0/0:34:1.0:3,3:3-3,3-3:25,9,0,0:3,25:NULL:180.427:326.675,113.385:0.0,0.0:0.0,1.92562e-07,1.0
+chr1	3569699	.	GAGGAGGAGGAG	.	.	.	END=3569710;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:23,21,0,0:4,23:NULL:284.952:366.612,131.36:0.0,0.0:0.0,1.6216e-06,1.0	0/0:44:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:247.882:326.675,113.385:0.0990099,0.0990099:0.0,2.60625e-08,1.0
+chr1	3570098	.	CAAAACAAAACAAAA	.	.	.	END=3570112;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:194.924:366.612,131.36:0.0,0.0:0.0,2.27263e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:245.567:326.675,113.385:0.0,0.0:0.0,7.38688e-08,1.0
+chr1	3570893	.	ATATCATATCATATATATCATATCATATATATCATATCATAT	.	.	.	END=3570934;RU=atatcatatcatat;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.984638:3,3:3-3,3-3:10,10,0,0:3,10:NULL:133.018:366.612,131.36:0.0,0.0:1.3946e-12,0.0121244,0.9879	0/0:23:0.994483:3,3:3-3,3-3:11,10,0,2:3,11:2,2:148.089:326.675,113.385:0.0,0.0:7.66727e-14,0.00376926,0.99624
+chr1	3574648	.	CACACACACACACACACACACACA	CACA,CACACACACACACACA	.	.	END=3574671;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.986214:2,8:1-12,3-12:4,32,0,2:2,2|8,2:5,1|7,1:334.309:366.612,131.36:1.82748,2.18962:0.999941,6.0901e-05,4.05663e-13	0/0:48:0.999993:12,12:5-12,5-12:20,21,0,5:12,20:7,1|8,1|9,2|11,1:323.513:326.675,113.385:2.41896,2.41896:2.44051e-28,1.74376e-05,0.999986
+chr1	3575668	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3575713;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.111384:14,22:12-24,22-24:2,20,0,6:22,2:7,2|8,1|9,1|13,1|17,1:240.982:366.612,131.36:5.29045,0.837205:0.887813,0.108392,0.00390201	0/3:60:0.278433:23,28:23-23,22-31:14,24,0,22:22,4|23,10:4,2|5,1|7,2|8,3|9,1|10,1|11,1|12,1|13,3|14,2|15,1|18,1|19,2|28,1:485.687:326.675,113.385:0.0,3.12812:3.576e-14,0.000275774,0.999727
+chr1	3576109	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	ATAGATAGATAGATAG,ATAGATAGATAGATAGATAG	.	.	END=3576152;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.997672:4,5:4-4,4-5:15,21,0,0:4,10|5,5:NULL:273.219:366.612,131.36:0.0,0.390807:1.0,0.0,0.0	0/0:59:1.0:11,11:11-11,11-11:24,18,0,17:11,24:3,4|5,3|6,1|7,1|8,2|9,2|10,4:388.513:326.675,113.385:0.0,0.0:1.17738e-30,7.58134e-07,1.0
+chr1	3576169	.	TAAATAAATAAATAAATAAATAAA	TAAATAAATAAA	.	.	END=3576192;RU=taaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.629186:3,3:3-4,3-4:21,24,0,0:3,19|4,2:NULL:322.466:366.612,131.36:0.491073,0.491073:1.0,1.28293e-06,0.0	0/0:56:1.0:6,6:6-6,6-6:32,18,0,6:6,32:3,2|4,1|5,3:335.677:326.675,113.385:0.0,0.0:0.0,1.09011e-09,1.0
+chr1	3576190	.	AAACAAACAAAC	AAAC	.	.	END=3576201;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0705051:1,1:1-2,1-2:0,20,0,0:NULL:NULL:187.471:366.612,131.36:0.572034,0.572034:0.267009,0.523725,0.209271	0/0:49:1.0:3,3:3-3,3-3:35,14,0,0:3,35:NULL:265.705:326.675,113.385:0.0,0.0:0.0,2.63675e-10,1.0
+chr1	3576505	.	TAGTAGTAGTAGTAGTAGTAGTAGTAG	TAGTAG	.	.	END=3576531;RU=tag;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.325152:2,2:2-8,2-8:3,9,0,0:2,3:NULL:89.3921:366.612,131.36:2.97837,2.97837:0.857414,0.14267,5.98554e-12	0/0:32:1.00001:9,9:9-9,9-9:20,8,0,3:9,20:7,2|8,1:176.424:326.675,113.385:0.139319,0.139319:1.07664e-33,4.93298e-06,0.999995
+chr1	3576606	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=3576674;RU=aga;PERIOD=3;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:18:0.0196081:28,39:12-39,15-40:0,6,0,12:NULL:6,1|8,1|12,4|14,1|18,1|25,2|28,1|37,1:148.215:366.612,131.36:8.12156,7.60409:7.34188e-30,0.228657,0.771374	0/1:30:0.984391:23,24:22-25,23-25:8,12,0,8:23,4|24,4:4,1|10,1|13,1|14,1|15,2|16,1|21,1:207.178:326.675,113.385:0.691512,0.390054:2.67454e-12,0.000776178,0.999226
+chr1	3577214	.	CAATCAATCAAT	.	.	.	END=3577225;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999312:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.142:366.612,131.36:0.0,0.0:0.0,0.000428151,0.999575	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:157.478:326.675,113.385:0.0,0.0:0.0,1.38944e-06,1.0
+chr1	3581254	.	CAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	END=3581273;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.924424:9,9:8-9,8-9:8,8,0,0:9,8:NULL:113.429:366.612,131.36:0.442564,0.442564:0.0,0.0,1.0	0/0:23:0.99584:5,5:5-5,5-5:11,7,0,5:5,11:3,3|4,2:146.225:326.675,113.385:0.0,0.0:2.42381e-38,0.00168218,0.998322
+chr1	3585710	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3585763;RU=ac;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.988159:19,19:19-19,19-19:11,14,0,0:19,11:NULL:180.75:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/2:31:0.294279:27,30:25-27,24-30:6,8,0,15:25,2|27,4:5,1|6,1|11,2|12,1|17,1|19,1|20,2|22,1|23,1|24,2|25,1|30,1:227.254:326.675,113.385:0.839893,2.50693:2.65437e-10,0.000150105,0.99985
+chr1	3588411	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=3588450;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:42:0.404092:18,20:17-18,16-20:14,12,0,16:16,3|17,2|18,9:4,1|5,5|7,1|12,3|13,1|14,2|17,2|20,1:318.935:366.612,131.36:0.275098,1.43157:0.000363908,0.999637,5.75798e-15	2/0:47:0.545097:19,20:18-20,18-20:14,18,0,15:18,3|19,3|20,8:5,1|6,1|7,1|9,1|11,1|13,2|14,3|16,1|17,3|18,1:355.199:326.675,113.385:0.840593,0.339533:7.22038e-07,0.88835,0.111751
+chr1	3589857	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3589900;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.94442:20,20:19-21,19-21:9,10,0,7:20,9:4,1|5,2|7,1|8,2|19,1:191.577:366.612,131.36:0.417958,0.417958:0.984787,0.0152459,6.41648e-11	0/0:35:0.776566:22,22:20-22,20-22:10,10,0,14:21,3|22,7:10,4|12,1|13,1|14,2|15,2|19,3|22,1:252.111:326.675,113.385:0.669325,0.669325:8.57183e-15,0.206472,0.793575
+chr1	3590265	.	ATATATATATATAT	ATATAT	.	.	END=3590278;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999755:3,3:1-3,1-3:15,16,0,0:3,15:NULL:213.737:366.612,131.36:0.851255,0.851255:1.0,0.0,0.0	0/0:32:0.999979:7,7:7-7,7-7:19,12,0,0:7,19:NULL:186.993:326.675,113.385:0.0990099,0.0990099:1.38016e-34,2.74559e-05,0.999972
+chr1	3593993	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3594042;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00116688:2,2:2-12,2-12:0,4,0,0:NULL:NULL:34.3347:366.612,131.36:2.8056,2.8056:0.296546,0.547881,0.155608	0/2:43:0.31823:25,34:24-25,13-34:9,16,0,17:23,2|24,2|25,5:6,2|8,2|9,1|10,1|11,1|17,2|18,1|19,3|24,3|33,1:340.608:326.675,113.385:0.469854,9.1742:2.0047e-08,0.00153837,0.998466
+chr1	3594304	.	TTTGTTTTGTTTTGT	TTTGTTTTGTTTTGTTTTGT	.	.	END=3594318;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999784:4,4:4-4,4-4:15,21,0,5:4,15:2,1|3,4:300.965:366.612,131.36:0.0,0.0:0.0,2.69095e-05,0.999972	0/0:36:0.999996:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.331:326.675,113.385:0.0,0.0:0.0,1.13909e-05,0.999988
+chr1	3595528	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3595547;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999943:6,6:6-6,6-6:17,12,0,6:6,17:2,1|3,2|5,3:219.837:366.612,131.36:0.0,0.0:0.0,7.38434e-06,0.999994	0/0:43:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:3,2|4,4|5,1:263.14:326.675,113.385:0.0,0.0:0.0,2.20549e-07,1.0
+chr1	3597713	.	CCACCCACCCAC	.	.	.	END=3597724;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:26,27,0,0:3,26:NULL:356.282:366.612,131.36:0.0,0.0:0.0,1.9024e-07,1.0	0/0:61:1.0:3,3:3-3,3-3:33,25,0,3:3,33:2,3:380.699:326.675,113.385:0.0,0.0:0.0,3.59453e-10,1.0
+chr1	3598374	.	AGAGAGAGAGAGAG	AG	.	.	END=3598387;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0669496:1,1:1-3,1-3:0,13,0,0:NULL:NULL:121.25:366.612,131.36:0.913899,0.913899:1.0,0.0,0.0	0/0:32:0.999993:7,7:6-7,6-7:19,10,0,2:7,19:4,1|6,1:177.761:326.675,113.385:0.21692,0.21692:0.0,1.1847e-05,0.999987
+chr1	3599536	.	ATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATAT	.	.	END=3599577;RU=at;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.123078:15,15:12-16,12-16:2,6,0,0:15,2:NULL:67.6077:366.612,131.36:1.89137,1.89137:1.0,0.0,0.0	2/2:8:0.155543:20,20:20-22,20-22:2,4,0,0:20,2:NULL:50.4491:326.675,113.385:0.906252,0.906252:0.466256,0.47373,0.060177
+chr1	3599896	.	AAACAAACAAAC	.	.	.	END=3599907;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.998658:3,3:3-4,3-4:13,8,0,0:3,13:NULL:122.393:366.612,131.36:0.46122,0.46122:2.46323e-38,0.000685506,0.999317	0/0:39:1.00001:3,3:3-3,3-3:21,14,0,4:3,21:2,3|3,1:241.059:326.675,113.385:0.0,0.0:0.0,5.51798e-07,1.0
+chr1	3600086	.	ACAAACAAACAAACAAACAA	.	.	.	END=3600105;RU=acaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:5,5:5-5,5-5:20,13,0,6:5,20:4,6:238.826:366.612,131.36:0.0,0.0:0.0,2.78696e-06,1.0	0/0:48:1.0:5,5:5-5,5-5:28,17,0,3:5,28:4,3:294.706:326.675,113.385:0.0,0.0:0.0,9.54704e-09,1.0
+chr1	3608018	.	TTGTTTGTTTGT	.	.	.	END=3608029;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,13,0,5:3,27:2,4|3,1:267.245:366.612,131.36:0.0,0.0:0.0,1.50003e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:36,7,0,0:3,36:NULL:206.438:326.675,113.385:0.0,0.0:0.0,1.14619e-10,1.0
+chr1	3608156	.	TTTGTTTGTTTGTTTG	.	.	.	END=3608171;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:25,15,0,2:4,25:2,1|3,1:249.862:366.612,131.36:0.0,0.0:0.0,3.34792e-07,1.0	0/0:47:1.0:4,4:4-4,4-4:25,16,0,6:4,25:3,6:283.617:326.675,113.385:0.0,0.0:0.0,9.75639e-08,1.0
+chr1	3610003	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3610046;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.646453:23,23:22-24,22-24:14,12,0,16:22,4|23,10:5,1|6,2|7,2|9,2|15,2|16,1|17,2|20,3|22,1:307.269:366.612,131.36:0.451337,0.451337:1.95176e-26,0.000370915,0.99963	0/0:52:0.999485:22,22:22-22,22-22:16,16,0,19:22,16:5,1|6,1|8,1|9,2|10,1|11,2|12,1|13,1|15,1|16,2|17,2|19,2|21,1|22,1:373.435:326.675,113.385:0.0,0.0:9.25308e-26,9.79314e-05,0.999903
+chr1	3612774	.	AAAGAAAGAAAGAAAG	.	.	.	END=3612789;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.210875:4,4:1-4,1-4:2,10,0,0:4,2:NULL:94.1995:366.612,131.36:1.38593,1.38593:2.8758e-07,0.546696,0.453414	0/0:49:1.0:4,4:4-4,4-4:26,19,0,4:4,26:3,4:315.785:326.675,113.385:0.0,0.0:0.0,7.2981e-08,1.0
+chr1	3613442	.	CTGCTGCTGCTG	.	.	.	END=3613453;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.999998:4,4:4-5,4-5:20,30,0,0:4,20:NULL:345.283:366.612,131.36:0.236383,0.236383:0.0,1.51018e-05,0.999986	0/0:54:1.0:4,4:4-4,4-4:37,17,0,0:4,37:NULL:294.658:326.675,113.385:0.0,0.0:0.0,9.79091e-11,1.0
+chr1	3630160	.	AATTAATTAATT	.	.	.	END=3630171;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999879:3,3:3-3,3-3:16,13,0,0:3,16:NULL:181.582:366.612,131.36:0.0,0.0:0.0,8.50016e-05,0.999917	0/0:23:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:109.798:326.675,113.385:0.0,0.0:0.0,8.58725e-06,0.999994
+chr1	3631051	.	ATTAATTAATTA	.	.	.	END=3631062;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998978:3,3:3-3,3-3:15,25,0,0:3,15:NULL:289.134:366.612,131.36:0.0,0.0:0.0,0.000866248,0.999135	0/0:37:1.00001:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.256:326.675,113.385:0.0,0.0:0.0,5.80739e-07,1.0
+chr1	3638662	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=3638693;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.999957:6,6:6-6,6-6:17,25,0,4:6,17:3,2|5,2:331.039:366.612,131.36:0.0,0.0:0.999995,5.32595e-06,0.0	0/0:65:1.0:8,8:8-8,8-8:24,26,0,15:8,24:2,2|3,1|4,3|5,2|6,1|7,6:454.389:326.675,113.385:0.0,0.0:0.0,3.53291e-07,1.0
+chr1	3639042	.	AAGAAAGAAAGA	.	.	.	END=3639053;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,13,0,3:3,25:2,3:236.707:366.612,131.36:0.0,0.0:0.0,5.6034e-08,1.0	0/0:63:1.0:3,3:3-3,3-3:48,15,0,0:3,48:NULL:321.101:326.675,113.385:0.0,0.0:0.0,1.76623e-14,1.0
+chr1	3649526	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3649573;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.837773:21,21:20-21,20-21:6,20,0,16:21,6:5,1|6,1|7,2|12,2|13,2|14,2|15,2|16,1|19,2|20,1:340.528:366.612,131.36:0.298675,0.298675:0.986037,0.0139951,1.83348e-12	0/0:29:0.862321:24,24:23-24,23-24:7,9,0,12:24,7:5,1|6,1|8,1|9,1|10,1|12,1|14,1|15,1|19,3|21,1:206.345:326.675,113.385:0.253975,0.253975:3.65728e-09,0.0713484,0.928746
+chr1	3650739	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=3650782;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.998517:15,15:11-15,11-15:20,10,0,5:14,3|15,17:9,4|10,1:222.223:366.612,131.36:1.16277,1.16277:1.0,0.0,0.0	0/0:60:0.808444:22,22:19-22,19-22:17,13,0,28:21,5|22,12:4,2|5,1|7,1|8,5|9,2|10,3|13,2|14,1|16,2|17,1|18,2|19,1|20,1|21,3|22,1:426.994:326.675,113.385:0.695329,0.695329:1.83475e-18,0.191368,0.808688
+chr1	3651177	.	AAGGAAGGAAGG	.	.	.	END=3651188;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:219.182:366.612,131.36:0.0,0.0:0.0,2.11714e-06,1.0	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.048:326.675,113.385:0.0,0.0:0.0,7.46354e-08,1.0
+chr1	3652162	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3652195;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.916268:17,17:16-17,16-17:16,21,0,5:16,4|17,12:8,1|9,1|12,1|14,2:316.434:366.612,131.36:0.382696,0.382696:1.15124e-12,0.0835824,0.916516	0/0:23:0.752574:17,17:16-17,16-17:11,9,0,3:16,3|17,8:9,2|15,1:160.628:326.675,113.385:0.412766,0.412766:1.17992e-08,0.24142,0.758596
+chr1	3652198	.	ATGTATGTATGT	.	.	.	END=3652209;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:252.979:366.612,131.36:0.0,0.0:0.0,2.25692e-06,1.0	0/0:21:0.999242:3,3:3-3,3-3:14,7,0,0:3,14:NULL:121.301:326.675,113.385:0.0,0.0:1.08e-42,0.000431677,0.999569
+chr1	3652267	.	ATTTATTTATTT	.	.	.	END=3652278;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:221.678:366.612,131.36:0.0,0.0:0.0,5.64366e-06,0.999995	0/0:24:0.999819:3,3:3-3,3-3:16,8,0,0:3,16:NULL:137.147:326.675,113.385:0.0,0.0:0.0,0.000102968,0.999896
+chr1	3653461	.	GTGGGTGGGTGG	.	.	.	END=3653472;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,27,0,0:3,29:NULL:360.913:366.612,131.36:0.0,0.0:0.0,5.32789e-08,1.0	0/0:25:0.999931:3,3:3-3,3-3:17,8,0,0:3,17:NULL:136.47:326.675,113.385:0.0,0.0:0.0,3.93278e-05,0.999963
+chr1	3655005	.	ATAAATAAATAAATAAATAAATAA	.	.	.	END=3655028;RU=ataa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999914:6,6:6-6,6-6:17,11,0,0:6,17:NULL:169.944:366.612,131.36:0.0,0.0:0.0,6.7504e-05,0.999933	0/0:22:0.999:6,6:6-6,6-6:13,7,0,2:6,13:5,2:129.011:326.675,113.385:0.0,0.0:8.21165e-40,0.000428176,0.999575
+chr1	3658217	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3658262;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.402513:28,28:27-28,27-28:6,11,0,12:27,2|28,4:6,3|9,1|10,1|17,1|18,1|22,1|23,1|24,2|27,1:222.141:366.612,131.36:0.478946,0.478946:0.0,0.0,1.0	0/0:35:0.928376:23,23:21-24,21-24:11,8,0,14:22,2|23,9:5,1|8,1|10,2|14,2|16,1|19,2|20,2|22,3:236.441:326.675,113.385:0.507951,0.507951:9.4495e-09,0.0600128,0.940076
+chr1	3658997	.	TAAAATAAAATAAAA	.	.	.	END=3659011;RU=taaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:243.445:366.612,131.36:0.0,0.0:0.0,2.70447e-07,1.0	0/0:31:0.993071:3,3:3-3,3-3:10,19,0,2:3,10:2,2:238.715:326.675,113.385:0.0,0.0:7.02703e-33,0.00430459,0.995704
+chr1	3659687	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3659732;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.525084:21,21:17-23,17-23:16,12,0,14:19,2|20,4|21,10:8,4|9,1|10,2|12,1|13,2|14,2|16,1|19,1:310.77:366.612,131.36:0.992275,0.992275:0.999879,0.000123886,3.17682e-17	0/0:50:0.973781:23,23:14-23,14-23:10,17,0,20:23,10:4,1|5,1|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,2|18,1|20,1|21,1:361.452:326.675,113.385:4.1361,4.1361:2.24582e-11,0.0119948,0.988032
+chr1	3660735	.	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=3660759;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.998797:5,5:5-5,5-5:12,21,0,9:5,12:3,6|4,2|5,1:312.548:366.612,131.36:0.0,0.0:0.0,0.000756779,0.999248	0/0:35:1.0:5,5:5-5,5-5:23,7,0,5:5,23:3,1|4,4:194.246:326.675,113.385:0.0,0.0:0.0,3.25399e-07,1.0
+chr1	3661144	.	TGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG	.	.	END=3661161;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:1.0:11,11:11-11,11-11:36,20,0,7:10,3|11,33:4,1|5,2|6,1|7,1|9,1|10,1:390.389:366.612,131.36:0.0,0.0:0.0,4.32167e-11,1.0	0/0:37:1.0:9,9:9-9,9-9:20,11,0,4:9,20:5,1|6,1|8,1|9,1:215.734:326.675,113.385:0.0,0.0:1.8807e-38,4.27597e-06,0.999995
+chr1	3667713	.	AACAAACAAACA	.	.	.	END=3667724;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:231.239:366.612,131.36:0.0,0.0:0.0,4.28522e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:192.588:326.675,113.385:0.0,0.0:0.0,4.54549e-06,0.999995
+chr1	3671145	.	GCAGCAGCAGCAGCA	.	.	.	END=3671159;RU=gca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:5,5:5-5,5-5:33,28,0,0:4,2|5,31:NULL:397.821:366.612,131.36:0.0990099,0.0990099:0.0,8.92102e-07,1.0	0/0:41:1.0:5,5:5-5,5-5:21,18,0,2:5,21:3,1|4,1:268.021:326.675,113.385:0.0,0.0:0.0,4.46015e-06,0.999995
+chr1	3671658	.	GCCGCCGCCGCCGCC	.	.	.	END=3671672;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:23,21,0,0:5,23:NULL:285.729:366.612,131.36:0.0,0.0:0.0,1.51329e-06,1.0	0/0:80:1.0:5,5:5-5,5-5:45,33,0,2:5,45:4,2:511.722:326.675,113.385:0.0,0.0:0.0,2.72444e-13,1.0
+chr1	3672852	.	CACCACCACCAC	CAC	.	.	END=3672863;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0545822:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.243:366.612,131.36:0.623212,0.623212:0.349383,0.488596,0.162064	0/0:6:0.242123:4,4:1-4,1-4:2,4,0,0:4,2:NULL:41.7069:326.675,113.385:0.857222,0.857222:4.36802e-06,0.405199,0.59487
+chr1	3673065	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	END=3673124;RU=cttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.48575:18,18:17-18,17-18:3,10,0,6:18,3:2,1|5,1|7,1|8,1|12,1|17,1:156.234:366.612,131.36:0.478946,0.478946:2.14036e-22,0.0868164,0.91328	0/0:20:0.66215:15,15:13-15,13-15:5,10,0,5:15,5:3,1|5,1|7,1|10,1|13,1:152.866:326.675,113.385:0.404368,0.404368:4.1154e-10,0.210486,0.789562
+chr1	3673125	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3673174;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.109:18,18:15-19,15-19:2,10,0,0:18,2:NULL:106.067:366.612,131.36:1.60555,1.60555:1.0,0.0,0.0	2/2:20:0.0214122:24,24:23-26,23-26:0,10,0,6:NULL:5,1|6,1|12,1|16,1|21,1|24,1:143.116:326.675,113.385:1.0234,1.0234:0.120437,0.554704,0.325002
+chr1	3677305	.	AGAGAGAGAGAG	.	.	.	END=3677316;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:6,6:6-6,6-6:23,20,0,0:6,23:NULL:282.976:366.612,131.36:0.0,0.0:0.0,1.29706e-06,1.0	0/0:36:1.0:6,6:6-6,6-6:24,10,0,2:6,24:5,2:207.0:326.675,113.385:0.0,0.0:0.0,1.97072e-07,1.0
+chr1	3679100	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=3679119;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999952:4,4:4-4,4-4:17,14,0,3:4,17:2,1|3,2:216.889:366.612,131.36:0.0,0.0:0.999971,3.05182e-05,8.95878e-40	0/0:36:1.0:5,5:5-5,5-5:26,7,0,3:5,26:4,3:191.379:326.675,113.385:0.0,0.0:0.0,4.85084e-08,1.0
+chr1	3680409	.	TTTTGTTTTGTTTTG	.	.	.	END=3680423;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999047:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.587:366.612,131.36:0.0,0.0:2.2255e-41,0.000601739,0.999401	0/0:39:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:227.682:326.675,113.385:0.0,0.0:0.0,2.28936e-07,1.0
+chr1	3681094	.	TCTATCTATCTA	.	.	.	END=3681105;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999866:3,3:3-3,3-3:16,8,0,0:3,16:NULL:135.989:366.612,131.36:0.0,0.0:0.0,8.57214e-05,0.999917	0/0:48:1.0:3,3:3-3,3-3:32,13,0,3:3,32:2,3:264.039:326.675,113.385:0.0,0.0:0.0,8.76106e-10,1.0
+chr1	3686501	.	TATATATATATATATATATATATATATATATATATATA	TA	.	.	END=3686538;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0184747:1,1:1-4,1-4:0,23,0,0:NULL:NULL:207.554:366.612,131.36:0.993953,0.993953:0.873247,0.124515,0.00234243	0/0:13:0.782299:19,19:19-19,19-19:6,7,0,0:19,6:NULL:88.745:326.675,113.385:0.417958,0.417958:3.40388e-08,0.123674,0.876425
+chr1	3688514	.	AAACAAACAAACAAAC	.	.	.	END=3688529;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999971:4,4:4-4,4-4:17,13,0,2:4,17:3,2:208.339:366.612,131.36:0.0,0.0:0.0,2.13281e-05,0.999979	0/0:29:0.999821:4,4:4-4,4-4:17,12,0,0:4,17:NULL:183.456:326.675,113.385:0.0,0.0:0.0,0.00014699,0.999856
+chr1	3689585	.	GTGGGTGGGTGGGTGG	.	.	.	END=3689600;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.846048:4,4:2-4,2-4:6,25,0,2:4,6:2,1|3,1:254.143:366.612,131.36:0.485452,0.485452:1.57694e-16,0.0988066,0.901298	0/0:40:0.980853:4,4:4-4,4-4:9,28,0,3:4,9:3,3:307.763:326.675,113.385:0.0,0.0:1.30993e-24,0.0128877,0.987141
+chr1	3693848	.	TCTCTGTCTCTGTCTCTG	.	.	.	END=3693865;RU=tctctg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:224.771:366.612,131.36:0.0,0.0:0.0,4.71796e-07,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:201.695:326.675,113.385:0.0,0.0:0.0,1.96197e-06,1.0
+chr1	3693870	.	TGTGTGTGTGTGTG	.	.	.	END=3693883;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:7,7:7-7,7-7:20,10,0,2:7,20:4,1|6,1:186.249:366.612,131.36:0.0,0.0:6.01707e-37,5.85978e-06,0.999995	0/0:30:0.999913:7,7:7-8,7-8:17,8,0,3:7,17:6,3:159.633:326.675,113.385:0.261581,0.261581:1.32769e-31,2.84845e-05,0.999972
+chr1	3695906	.	TTTTATTTTATTTTA	TTTTATTTTATTTTATTTTA	.	.	END=3695920;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.977606:4,4:4-4,4-4:9,10,0,2:4,9:3,2:143.282:366.612,131.36:0.0,0.0:0.0,0.00535545,0.994656	0/0:28:0.999485:3,3:3-3,3-3:14,12,0,2:3,14:2,2:185.671:326.675,113.385:0.0,0.0:1.2918e-40,0.000265004,0.999736
+chr1	3699904	.	CTTTCTTTCTTT	.	.	.	END=3699915;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997682:3,3:3-3,3-3:13,13,0,0:3,13:NULL:177.632:366.612,131.36:0.0,0.0:3.5e-43,0.00138937,0.998617	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:175.035:326.675,113.385:0.0,0.0:0.0,3.71979e-07,1.0
+chr1	3700824	.	CATCATCATCAT	.	.	.	END=3700835;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:24,21,0,4:4,24:3,4:317.857:366.612,131.36:0.0,0.0:0.0,3.12785e-07,1.0	0/0:66:1.0:4,4:4-4,4-4:47,15,0,4:4,47:3,4:350.769:326.675,113.385:0.0,0.0:0.0,3.01842e-14,1.0
+chr1	3702280	.	AAATAAATAAAT	.	.	.	END=3702291;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:24,15,0,2:3,24:2,2:246.834:366.612,131.36:0.0,0.0:0.0,6.36609e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.624:326.675,113.385:0.0,0.0:0.0,2.31843e-06,1.0
+chr1	3702293	.	AAATAAAATAAAATA	.	.	.	END=3702307;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:226.913:366.612,131.36:0.0,0.0:0.0,1.69776e-06,1.0	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:143.124:326.675,113.385:0.0,0.0:0.0,9.21183e-06,0.999993
+chr1	3708462	.	GAGAGAGAGAGAGA	GAGAGAGAGA	.	.	END=3708475;RU=ga;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.00667709:5,5:1-6,1-6:0,9,0,0:NULL:NULL:84.5076:366.612,131.36:1.98272,1.98272:0.147395,0.516524,0.336216	0/0:28:0.999898:7,7:7-7,7-7:17,7,0,3:7,17:4,1|5,1|6,1:157.139:326.675,113.385:0.0990099,0.0990099:1.44551e-31,3.82113e-05,0.999963
+chr1	3712175	.	ACACACACACACACACACACACACACAC	ACACACACACACACAC	.	.	END=3712202;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.723808:8,8:7-11,7-11:5,16,0,4:8,5:6,2|7,1|8,1:197.448:366.612,131.36:1.37592,1.37592:0.976772,0.0232742,1.39106e-16	0/0:38:0.866293:14,14:13-16,13-16:15,14,0,7:13,3|14,12:6,1|7,1|9,2|10,1|12,1|13,1:256.427:326.675,113.385:0.696456,0.696456:1.35313e-13,0.133089,0.867002
+chr1	3712203	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=3712260;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0579816:30,32:30-33,30-33:0,12,0,7:NULL:5,1|7,1|8,3|11,1|15,1:169.773:366.612,131.36:1.06793,1.04894:0.0,0.0,1.0	0/0:41:0.954639:29,29:24-30,24-30:11,12,0,14:28,2|29,9:5,1|6,1|7,1|13,1|14,1|15,1|16,1|18,1|19,1|20,2|21,1|24,1|29,1:276.241:326.675,113.385:1.67885,1.67885:5.44121e-18,0.0265952,0.973455
+chr1	3719601	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3719644;RU=ag;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:19:0.0347453:30,33:10-32,10-32:0,9,0,8:NULL:13,1|14,1|19,1|20,1|22,1|26,1|28,1|30,1:149.785:366.612,131.36:9.11023,9.18537:1.2421e-29,0.214365,0.785679	0/1:38:0.465736:22,25:21-22,20-25:16,11,0,11:20,5|21,3|22,8:7,1|10,2|14,2|15,2|20,1|21,1|24,1|25,1:285.322:326.675,113.385:0.358902,1.23703:2.13583e-17,1.41103e-05,0.999987
+chr1	3719848	.	CCAGCCAGCCAG	.	.	.	END=3719859;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:216.479:366.612,131.36:0.0,0.0:0.0,8.62623e-07,1.0	0/0:46:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:288.791:326.675,113.385:0.0,0.0:0.0,1.16681e-07,1.0
+chr1	3720011	.	GTGGTGGTGGTG	.	.	.	END=3720022;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:25,15,0,0:4,25:NULL:234.32:366.612,131.36:0.0,0.0:0.0,2.50935e-07,1.0	0/0:47:1.0:4,4:4-4,4-4:35,12,0,0:4,35:NULL:254.334:326.675,113.385:0.0,0.0:0.0,2.74008e-10,1.0
+chr1	3722193	.	CACCACCACCAC	.	.	.	END=3722204;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999986:4,4:4-4,4-4:19,20,0,0:4,19:NULL:255.587:366.612,131.36:0.0,0.0:0.0,2.0731e-05,0.999979	0/0:36:0.999995:4,4:4-4,4-4:20,16,0,0:4,20:NULL:226.869:326.675,113.385:0.0,0.0:0.0,1.35846e-05,0.999987
+chr1	3724786	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3724835;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.920241:8,8:7-8,7-8:11,6,0,0:7,2|8,9:NULL:107.946:366.612,131.36:0.311527,0.311527:1.0,0.0,0.0	0/2:64:0.88837:25,27:13-26,13-27:13,28,0,22:23,2|25,8|26,3:5,1|7,3|9,1|12,2|13,2|14,1|15,2|16,1|19,2|20,1|22,1|23,1|24,3|27,1:510.895:326.675,113.385:3.432,4.39533:6.1595e-17,1.69852e-07,1.0
+chr1	3724835	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG	.	.	END=3724868;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.704735:7,7:6-19,6-19:14,10,0,0:6,2|7,12:NULL:156.457:366.612,131.36:5.39532,5.39532:0.999773,0.000228516,0.0	0/0:70:1.0:17,17:8-17,8-17:27,26,0,15:17,27:4,2|5,2|7,1|8,4|9,1|13,1|14,3|15,1:469.515:326.675,113.385:2.68881,2.68881:0.0,8.94391e-08,1.0
+chr1	3726870	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	END=3726905;RU=cttc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.995342:6,7:6-9,7-9:6,5,0,0:6,2|7,4:NULL:80.5326:366.612,131.36:1.26508,0.526896:0.999614,0.000386882,3.11278e-14	0/0:21:0.670658:9,9:9-9,9-9:5,13,0,3:9,5:3,1|6,2:160.314:326.675,113.385:0.19802,0.19802:7.56913e-10,0.260988,0.739012
+chr1	3727052	.	CCACCCACCCAC	.	.	.	END=3727063;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999387:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.249:366.612,131.36:0.0,0.0:0.0,0.000337427,0.999666	0/0:44:1.0:3,3:3-3,3-3:31,9,0,4:3,31:2,3|3,1:231.54:326.675,113.385:0.0,0.0:0.0,5.74388e-10,1.0
+chr1	3727955	.	CACACACACACA	CACACA,CACACACACA	.	.	END=3727966;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:13:0.523675:5,5:5-6,5-6:4,8,0,0:5,4:NULL:88.9008:366.612,131.36:0.605662,0.605662:0.794176,0.205873,4.81081e-08	1/0:29:0.323451:3,6:3-6,3-6:2,27,0,0:6,2:NULL:249.758:326.675,113.385:1.38061,1.03663:9.28477e-05,0.665603,0.334317
+chr1	3730566	.	ATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3730609;RU=at;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:5:0.0242636:23,23:23-27,23-27:0,3,0,0:NULL:NULL:27.3808:366.612,131.36:1.10572,1.10572:0.0,0.0,1.0	1/1:11:0.167736:21,21:17-21,17-21:2,8,0,0:21,2:NULL:84.4048:326.675,113.385:1.1439,1.1439:0.620722,0.34227,0.0370962
+chr1	3730917	.	AAAATAAAATAAAAT	.	.	.	END=3730931;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99712:3,3:3-3,3-3:12,10,0,0:3,12:NULL:138.177:366.612,131.36:0.0,0.0:1.15463e-39,0.0017405,0.998262	0/0:24:0.999991:3,3:3-3,3-3:18,6,0,0:3,18:NULL:128.579:326.675,113.385:0.0,0.0:0.0,1.8288e-05,0.999985
+chr1	3732771	.	ACAAACAAACAAACAA	.	.	.	END=3732786;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:20,9,0,0:4,20:NULL:159.888:366.612,131.36:0.0,0.0:0.0,6.7041e-06,0.999994	0/0:52:1.0:4,4:4-4,4-4:37,12,0,3:4,37:3,3:281.16:326.675,113.385:0.0,0.0:0.0,2.69868e-11,1.0
+chr1	3733827	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3733846;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999765:6,6:6-6,6-6:15,13,0,6:6,15:3,2|4,1|5,3:218.421:366.612,131.36:0.0,0.0:0.0,2.32535e-05,0.999979	0/0:42:1.0:5,5:5-5,5-5:20,18,0,4:5,20:3,1|4,3:274.694:326.675,113.385:0.0,0.0:0.0,4.27277e-06,0.999995
+chr1	3733847	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3733864;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999818:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.606:366.612,131.36:0.0,0.0:0.0,0.000105411,0.999895	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:221.582:326.675,113.385:0.0,0.0:0.0,4.92952e-06,0.999995
+chr1	3742835	.	ACATACATACAT	.	.	.	END=3742846;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.131:366.612,131.36:0.0,0.0:0.0,2.71881e-07,1.0	0/0:23:0.999756:3,3:3-3,3-3:15,6,0,2:3,15:2,2:128.457:326.675,113.385:0.0,0.0:0.0,0.000104244,0.999896
+chr1	3744407	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	END=3744462;RU=ggaa;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.993983:11,11:11-11,11-11:11,3,0,6:11,11:3,1|5,1|7,2|8,1|9,1:116.828:366.612,131.36:0.0,0.0:0.999066,0.000937214,5.358e-29	0/0:35:0.994739:14,14:14-14,14-14:11,13,0,11:14,11:3,1|4,2|5,1|7,2|8,2|11,1|12,2:247.076:326.675,113.385:0.0,0.0:3.08675e-25,0.00330763,0.996701
+chr1	3745050	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAG	.	.	END=3745103;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.00833439:3,3:2-5,2-5:0,11,0,0:NULL:NULL:95.702:366.612,131.36:0.85137,0.85137:0.805952,0.189878,0.00422831	0/0:28:0.811515:27,27:23-27,23-27:6,13,0,7:27,6:11,1|17,2|19,1|23,1|26,2:200.791:326.675,113.385:1.59366,1.59366:2.83126e-07,0.0964777,0.903624
+chr1	3752086	.	GTGTGTGTGTGT	.	.	.	END=3752097;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999816:6,6:6-6,6-6:16,7,0,0:6,16:NULL:130.022:366.612,131.36:0.0,0.0:2.15979e-39,0.000115849,0.999887	0/0:39:1.00001:6,6:6-6,6-6:21,15,0,2:6,21:5,2:235.47:326.675,113.385:0.139319,0.139319:0.0,2.68487e-06,1.0
+chr1	3758404	.	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	AAACAAAACAAAACAAAACAAAACAAAACAAAACA	.	.	END=3758448;RU=aaaca;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.996019:7,7:7-7,7-7:11,11,0,3:7,11:3,1|5,1|6,1:166.028:366.612,131.36:0.0,0.0:0.998838,0.00116594,1.13138e-28	0/0:28:0.99793:9,9:9-9,9-9:12,9,0,7:9,12:5,3|7,1|8,3:176.998:326.675,113.385:0.0,0.0:2.98334e-31,0.00078847,0.999217
+chr1	3765019	.	ATTTATTTATTT	.	.	.	END=3765030;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999994:3,3:3-3,3-3:19,15,0,0:3,19:NULL:207.901:366.612,131.36:0.0,0.0:0.0,1.32469e-05,0.999987	0/0:28:0.999971:3,3:3-3,3-3:18,10,0,0:3,18:NULL:156.196:326.675,113.385:0.0,0.0:0.0,2.37635e-05,0.999979
+chr1	3766121	.	ACCCACCCACCC	.	.	.	END=3766132;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.963733:3,3:3-3,3-3:7,15,0,0:3,7:NULL:162.987:366.612,131.36:0.0,0.0:4.39709e-22,0.0207749,0.979265	0/0:30:0.981572:3,3:3-3,3-3:9,21,0,0:3,9:NULL:219.913:326.675,113.385:0.0,0.0:9.73776e-28,0.0135567,0.986474
+chr1	3774612	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3774657;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.861539:19,19:18-19,18-19:13,9,0,10:18,3|19,10:7,2|10,1|13,1|14,2|15,2|17,1|18,1:225.995:366.612,131.36:0.35561,0.35561:1.0,0.0,0.0	0/2:51:0.766394:23,24:21-23,17-25:16,13,0,19:21,2|22,3|23,11:5,2|8,1|9,3|11,3|13,1|14,5|21,1|22,1|23,1|24,1:364.47:326.675,113.385:0.893506,2.31438:9.02236e-21,4.32181e-05,0.999957
+chr1	3779502	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3779519;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.978872:3,3:3-3,3-3:9,9,0,0:3,9:NULL:117.204:366.612,131.36:0.0,0.0:9.67506e-30,0.0137041,0.986326	0/0:23:0.996225:3,3:3-3,3-3:11,10,0,2:3,11:2,2:146.011:326.675,113.385:0.0,0.0:4.10704e-36,0.00189986,0.998108
+chr1	3784264	.	TTTATTTATTTA	.	.	.	END=3784275;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:224.825:366.612,131.36:0.0,0.0:0.0,3.24046e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:196.026:326.675,113.385:0.0,0.0:0.0,4.68302e-07,1.0
+chr1	3785257	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3785292;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.796789:23,24:21-25,24-25:10,9,0,20:23,4|24,6:4,2|5,2|6,1|9,1|10,2|11,2|15,1|16,2|17,1|18,4|22,1|23,1:290.161:366.612,131.36:0.845709,0.242928:0.0,0.0,1.0	0/0:34:0.999161:18,18:18-18,18-18:16,9,0,7:18,16:6,2|10,1|11,2|13,1|16,1:210.872:326.675,113.385:0.0,0.0:1.9113e-20,0.000261504,0.999742
+chr1	3786174	.	TTTATTTATTTA	.	.	.	END=3786185;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:169.623:366.612,131.36:0.0,0.0:0.0,2.02586e-06,1.0	0/0:26:0.999919:3,3:3-3,3-3:17,9,0,0:3,17:NULL:151.107:326.675,113.385:0.0,0.0:0.0,6.01705e-05,0.999941
+chr1	3786490	.	TAAATAAATAAA	.	.	.	END=3786501;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:23,5,0,0:3,23:NULL:139.261:366.612,131.36:0.0,0.0:0.0,4.1567e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:185.487:326.675,113.385:0.0,0.0:0.0,1.83393e-08,1.0
+chr1	3788152	.	CATACATACATA	.	.	.	END=3788163;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999885:3,3:3-3,3-3:16,19,0,0:3,16:NULL:237.894:366.612,131.36:0.0,0.0:0.0,8.15691e-05,0.999919	0/0:33:0.999993:3,3:3-3,3-3:18,10,0,5:3,18:2,5:200.301:326.675,113.385:0.0,0.0:0.0,1.22226e-05,0.999987
+chr1	3788588	.	CTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCC	.	.	.	END=3788627;RU=ctctctcc;PERIOD=8;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.645137:5,5:2-5,2-5:5,11,0,0:5,5:NULL:123.911:366.612,131.36:0.675883,0.675883:1.07449e-14,0.312121,0.68789	0/0:18:0.887773:5,5:5-5,5-5:6,9,0,3:5,6:2,1|4,2:124.338:326.675,113.385:0.29703,0.29703:5.95352e-18,0.0705128,0.929582
+chr1	3789797	.	AATAAATAAATA	.	.	.	END=3789808;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.998953:3,3:3-3,3-3:14,6,0,0:3,14:NULL:115.25:366.612,131.36:0.0,0.0:0.0,0.000634039,0.99937	0/0:21:0.999822:3,3:3-3,3-3:16,5,0,0:3,16:NULL:110.646:326.675,113.385:0.0,0.0:0.0,9.87633e-05,0.999903
+chr1	3805050	.	TTGGTTGGTTGG	TTGGTTGG	.	.	END=3805061;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0810857:2,2:1-3,1-3:0,19,0,0:NULL:NULL:190.732:366.612,131.36:0.651813,0.651813:0.251698,0.520872,0.227449	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:231.613:326.675,113.385:0.0,0.0:0.0,7.69771e-08,1.0
+chr1	3805151	.	CTGCCTCTGCCTCTGCCTCTGCCT	CTGCCT,CTGCCTCTGCCT	.	.	END=3805174;RU=ctgcct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:19:0.268599:1,2:1-2,1-2:0,19,0,0:NULL:NULL:189.234:366.612,131.36:0.573574,0.493065:0.660386,0.313909,0.0257531	0/0:40:1.0:4,4:4-4,4-4:25,12,0,3:4,25:3,3:229.306:326.675,113.385:0.0,0.0:0.0,1.29196e-07,1.0
+chr1	3805421	.	ACCCACCCACCC	.	.	.	END=3805432;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.45434:3,3:2-3,2-3:3,5,0,0:3,3:NULL:53.6259:366.612,131.36:0.222277,0.222277:2.34056e-09,0.235506,0.764519	0/0:17:0.933602:3,3:3-3,3-3:7,10,0,0:3,7:NULL:114.943:326.675,113.385:0.0,0.0:2.59369e-20,0.0362776,0.96379
+chr1	3808366	.	TTGTTTGTTTGT	.	.	.	END=3808377;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999908:3,3:3-3,3-3:17,26,0,0:3,17:NULL:306.492:366.612,131.36:0.0,0.0:0.0,7.48206e-05,0.999926	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:166.117:326.675,113.385:0.0,0.0:0.0,5.45415e-06,0.999995
+chr1	3820046	.	ATACATACATAC	.	.	.	END=3820057;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:284.425:366.612,131.36:0.0,0.0:0.0,2.20899e-07,1.0	0/0:20:0.998942:3,3:3-3,3-3:13,5,0,2:3,13:2,2:109.567:326.675,113.385:0.0,0.0:1.1e-44,0.000421401,0.999583
+chr1	3820489	.	GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	GAAGA	.	.	END=3820553;RU=gaaga;PERIOD=5;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0470469:1,1:1-3,1-3:0,12,0,0:NULL:NULL:107.696:366.612,131.36:0.738802,0.738802:0.881235,0.117651,0.00121683	0/0:20:0.495419:13,13:11-13,11-13:3,13,0,4:13,3:6,1|11,2|12,1:162.65:326.675,113.385:0.634282,0.634282:1.54106e-06,0.353491,0.646549
+chr1	3821324	.	ATGAAATGAAATGAA	.	.	.	END=3821338;RU=atgaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:193.08:366.612,131.36:0.0,0.0:0.0,2.98735e-07,1.0	0/0:30:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:162.026:326.675,113.385:0.0,0.0:0.0,2.89903e-06,1.0
+chr1	3821877	.	AATAAATAAATA	.	.	.	END=3821888;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:209.292:366.612,131.36:0.0,0.0:0.0,3.26394e-06,1.0	0/0:24:0.999983:3,3:3-3,3-3:18,6,0,0:3,18:NULL:123.511:326.675,113.385:0.0,0.0:0.0,2.01864e-05,0.99998
+chr1	3824596	.	GGGTGGGTGGGT	.	.	.	END=3824607;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.270275:3,3:3-5,3-5:2,6,0,0:3,2:NULL:60.4922:366.612,131.36:0.557805,0.557805:1.71077e-06,0.273652,0.726351	0/0:23:0.985127:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.238:326.675,113.385:0.0,0.0:2.41429e-25,0.00757214,0.992446
+chr1	3830973	.	TGGCTGGCTGGC	.	.	.	END=3830984;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999344:3,3:3-3,3-3:14,25,0,0:3,14:NULL:289.904:366.612,131.36:0.0,0.0:0.0,0.000518182,0.999484	0/0:63:1.0:3,3:3-3,3-3:38,22,0,3:3,38:2,3:370.915:326.675,113.385:0.0,0.0:0.0,1.51153e-11,1.0
+chr1	3835805	.	ACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3835830;RU=ac;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:55:0.524651:21,21:19-24,19-24:16,17,0,20:19,3|20,2|21,9|22,2:4,1|5,1|7,1|10,3|12,1|14,3|16,3|17,1|18,4|19,1|20,1:410.769:366.612,131.36:1.4981,1.4981:0.0,0.0,1.0	0/0:44:0.990705:13,13:12-13,12-13:17,19,0,7:12,3|13,14:8,1|9,1|10,2|11,1|12,1|13,1:317.303:326.675,113.385:0.222277,0.222277:4.40569e-26,0.0089973,0.991023
+chr1	3838836	.	TTGTTTGTTTGTTTGTTTGT	TTGT	.	.	END=3838855;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0611499:1,1:1-3,1-3:0,19,0,0:NULL:NULL:176.361:366.612,131.36:0.763982,0.763982:0.495318,0.428118,0.0766308	0/0:22:0.99562:5,5:5-5,5-5:11,9,0,2:5,11:3,1|4,1:142.612:326.675,113.385:0.0,0.0:2.51935e-32,0.0024653,0.997541
+chr1	3842935	.	GTTTGTTTGTTTGTTT	GTTTGTTTGTTT	.	.	END=3842950;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.103226:3,3:1-4,1-4:0,13,0,3:NULL:2,2|3,1:139.412:366.612,131.36:0.668152,0.668152:0.265285,0.537828,0.196891	0/0:21:0.998957:4,4:4-4,4-4:13,5,0,3:4,13:2,3:122.152:326.675,113.385:0.0,0.0:1.62355e-39,0.000587118,0.999416
+chr1	3846941	.	ACCCACCCACCC	.	.	.	END=3846952;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.964559:3,3:3-3,3-3:8,7,0,0:3,8:NULL:90.4399:366.612,131.36:0.0,0.0:1.77949e-24,0.014786,0.985246	0/0:21:0.98379:3,3:3-3,3-3:9,12,0,0:3,9:NULL:143.689:326.675,113.385:0.0,0.0:3.48521e-27,0.00981038,0.990209
+chr1	3856577	.	CTTGCTTGCTTGCTTGCTTGCTTG	CTTGCTTGCTTGCTTGCTTGCTTGCTTG	.	.	END=3856600;RU=cttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.999866:7,7:7-7,7-7:16,22,0,6:7,16:3,2|4,1|6,3:304.611:366.612,131.36:0.0,0.0:0.0,1.80724e-05,0.999985	0/0:47:1.0:6,6:6-6,6-6:20,21,0,6:6,20:4,1|5,5:322.057:326.675,113.385:0.0,0.0:0.0,7.0502e-06,0.999994
+chr1	3858322	.	GGAGGGAGGGAG	.	.	.	END=3858333;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:287.409:366.612,131.36:0.0,0.0:0.0,6.46565e-13,1.0	0/0:40:1.0:3,3:3-3,3-3:28,10,0,2:3,28:2,2:214.309:326.675,113.385:0.0,0.0:0.0,1.39737e-08,1.0
+chr1	3859194	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTG	.	.	END=3859211;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:69:1.0:5,5:5-5,5-5:41,24,0,4:5,41:3,2|4,2:410.296:366.612,131.36:0.0,0.0:1.0,2.43332e-12,0.0	0/0:23:0.999991:6,6:6-6,6-6:18,3,0,2:6,18:4,1|5,1:115.133:326.675,113.385:0.0,0.0:4e-45,1.38367e-05,0.999987
+chr1	3863716	.	AATAACAATAACAATAAC	.	.	.	END=3863733;RU=aataac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:208.152:366.612,131.36:0.0,0.0:0.0,1.27778e-06,1.0	0/0:40:1.00001:3,3:3-3,3-3:21,15,0,4:3,21:2,4:248.811:326.675,113.385:0.0,0.0:0.0,2.85121e-06,1.0
+chr1	3869461	.	AAAACAAAACAAAACAAAACAAAAC	AAAAC	.	.	END=3869485;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0233967:1,1:1-2,1-2:0,7,0,0:NULL:NULL:61.8713:366.612,131.36:0.379868,0.379868:0.2013,0.56247,0.236278	0/0:40:0.999988:5,5:4-5,4-5:20,17,0,2:5,20:2,2:254.198:326.675,113.385:0.284901,0.284901:0.0,2.21254e-05,0.999979
+chr1	3870192	.	TAAATAAATAAA	.	.	.	END=3870203;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999475:3,3:3-3,3-3:14,20,0,0:3,14:NULL:237.66:366.612,131.36:0.0,0.0:0.0,0.000336171,0.999667	0/0:16:0.939518:3,3:3-3,3-3:7,9,0,0:3,7:NULL:111.194:326.675,113.385:0.0,0.0:1.192e-24,0.0342012,0.965862
+chr1	3870234	.	AAAATAAAATAAAAT	AAAATAAAAT	.	.	END=3870248;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999274:2,2:2-2,2-2:13,21,0,0:2,13:NULL:246.786:366.612,131.36:0.0,0.0:0.999607,0.000394087,3.85503e-36	0/0:14:0.945741:3,3:3-3,3-3:7,7,0,0:3,7:NULL:91.0854:326.675,113.385:0.0,0.0:1.41804e-21,0.0326951,0.967364
+chr1	3886751	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=3886794;RU=taga;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99542:11,11:10-11,10-11:12,14,0,0:11,12:NULL:180.536:366.612,131.36:0.36513,0.36513:5.1308e-32,0.00375858,0.996254	0/0:26:0.999928:11,11:11-11,11-11:17,4,0,4:11,17:3,1|5,1|9,1|10,1:141.46:326.675,113.385:0.139319,0.139319:3e-45,3.76311e-05,0.999964
+chr1	3896272	.	ACCCACCCACCC	.	.	.	END=3896283;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.683871:3,3:2-3,2-3:5,4,0,0:3,5:NULL:58.6488:366.612,131.36:0.169767,0.169767:5.75032e-15,0.148271,0.851811	0/0:46:0.997375:3,3:3-3,3-3:12,34,0,0:3,12:NULL:355.046:326.675,113.385:0.0,0.0:1.21639e-35,0.00217,0.997837
+chr1	3898788	.	TAAATAAATAAA	.	.	.	END=3898799;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:236.45:366.612,131.36:0.0,0.0:0.0,4.53293e-06,0.999995	0/0:22:0.998845:3,3:3-3,3-3:13,9,0,0:3,13:NULL:137.994:326.675,113.385:0.0,0.0:1.90907e-39,0.000696988,0.999308
+chr1	3898809	.	ATAATAATAATA	.	.	.	END=3898820;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999304:4,4:4-4,4-4:14,19,0,0:4,14:NULL:234.002:366.612,131.36:0.0,0.0:6.90189e-39,0.000574116,0.99943	0/0:14:0.843641:4,4:3-4,3-4:6,7,0,0:4,6:NULL:91.4475:326.675,113.385:0.497026,0.497026:9.08117e-17,0.0951607,0.904939
+chr1	3902855	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=3902882;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.972597:6,6:5-6,5-6:19,10,0,2:5,2|6,17:5,2:191.553:366.612,131.36:0.398507,0.398507:0.999994,8.10062e-06,9.10738e-35	0/0:32:0.999965:7,7:7-7,7-7:18,12,0,2:7,18:5,1|6,1:195.079:326.675,113.385:0.0,0.0:0.0,2.76481e-05,0.999972
+chr1	3908575	.	TGTTTTGTTTTGTTT	.	.	.	END=3908589;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:23,19,0,0:3,23:NULL:261.146:366.612,131.36:0.0,0.0:0.0,8.71967e-07,1.0	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:168.466:326.675,113.385:0.0,0.0:0.0,1.73616e-06,1.0
+chr1	3911778	.	ACAGACAGACAG	.	.	.	END=3911789;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,14,0,0:3,20:NULL:202.137:366.612,131.36:0.0,0.0:0.0,3.67449e-06,1.0	0/0:35:0.999993:3,3:3-3,3-3:19,14,0,2:3,19:2,2:218.129:326.675,113.385:0.0,0.0:0.0,1.6093e-05,0.999986
+chr1	3913472	.	CCCCACCCCCACCCCCAC	.	.	.	END=3913489;RU=ccccac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.994325:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.599:366.612,131.36:0.0,0.0:6.82753e-33,0.00376458,0.996247	0/0:17:0.799407:3,3:1-3,1-3:5,12,0,0:3,5:NULL:130.679:326.675,113.385:0.339533,0.339533:1.86304e-15,0.140504,0.85958
+chr1	3917711	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=3917748;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:18:0.889114:19,24:19-23,22-24:7,5,0,5:19,3|23,2|24,2:5,1|7,1|12,1|13,1|15,1:123.646:366.612,131.36:1.71576,0.657801:3.79657e-12,5.74102e-05,0.999942	0/0:23:0.682436:19,19:18-19,18-19:10,6,0,7:18,2|19,8:5,1|9,1|11,1|14,1|15,1|18,2:158.387:326.675,113.385:0.452422,0.452422:5.22233e-11,0.308645,0.691365
+chr1	3919065	.	TTTGTTTGTTTG	.	.	.	END=3919076;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999992:3,3:3-3,3-3:19,11,0,0:3,19:NULL:175.122:366.612,131.36:0.0,0.0:0.0,1.60593e-05,0.999986	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:218.523:326.675,113.385:0.0,0.0:0.0,1.10826e-06,1.0
+chr1	3919745	.	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTT	TATTTTATTTTATTTTATTTTATTTTATTT	.	.	END=3919794;RU=tattt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.940197:6,6:6-6,6-6:8,16,0,2:6,8:4,1|5,1:200.349:366.612,131.36:0.417958,0.417958:1.0,0.0,0.0	0/0:31:0.940551:10,10:10-10,10-10:7,12,0,12:10,7:4,5|6,4|7,1|8,1|9,1:223.928:326.675,113.385:0.0,0.0:5.12712e-19,0.0354483,0.964613
+chr1	3923978	.	TATATATATATATATA	TATATATATATATATATA	.	.	END=3923993;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.926104:9,9:7-10,7-10:8,4,0,0:9,8:NULL:67.4941:366.612,131.36:0.929323,0.929323:6.6815e-18,0.0350496,0.965016	0/0:18:0.998938:8,8:8-8,8-8:14,4,0,0:8,14:NULL:95.9206:326.675,113.385:0.0,0.0:3.50024e-20,0.000529512,0.999476
+chr1	3924698	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	END=3924742;RU=gagag;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.0643016:9,9:6-11,6-11:0,11,0,9:NULL:2,1|3,1|6,3|7,2|8,1|9,1:165.574:366.612,131.36:1.57311,1.57311:5.08532e-09,0.495721,0.504304	1/1:19:0.962867:8,8:8-8,8-8:8,8,0,3:8,8:5,1|6,1|7,1:132.604:326.675,113.385:0.0,0.0:0.985408,0.0146238,3.942e-21
+chr1	3924854	.	CTGCTGCTGCTG	.	.	.	END=3924865;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999785:4,4:4-4,4-4:16,13,0,0:4,16:NULL:184.539:366.612,131.36:0.0,0.0:0.0,0.000136256,0.999865	0/0:29:0.999959:4,4:4-4,4-4:18,11,0,0:4,18:NULL:175.104:326.675,113.385:0.0,0.0:0.0,4.83312e-05,0.999955
+chr1	3925698	.	AGAGAGAGAGAG	.	.	.	END=3925709;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:31,7,0,2:6,31:5,2:208.134:366.612,131.36:0.0,0.0:0.0,2.33183e-09,1.0	0/0:26:1.0:6,6:6-6,6-6:26,0,0,0:6,26:NULL:102.029:326.675,113.385:0.0,0.0:0.0,9.26147e-08,1.0
+chr1	3929285	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=3929312;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.99692:11,11:10-11,10-11:12,20,0,7:11,12:4,1|6,2|8,3|10,1:289.866:366.612,131.36:0.169767,0.169767:0.999713,0.000288637,6.51961e-32	0/0:41:0.19087:14,14:14-16,14-16:24,8,0,7:14,24:7,1|8,2|10,1|11,1|13,1|16,1:245.259:326.675,113.385:0.991682,0.991682:2.33484e-36,7.62607e-08,1.0
+chr1	3932876	.	AAAACAAAACAAAAC	.	.	.	END=3932890;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99924:3,3:3-3,3-3:13,14,0,0:3,13:NULL:182.319:366.612,131.36:0.0,0.0:1.5e-44,0.000526743,0.999476	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:136.58:326.675,113.385:0.0,0.0:0.0,8.88413e-06,0.999994
+chr1	3936576	.	AACAAACAAACA	.	.	.	END=3936587;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,16,0,0:3,23:NULL:233.798:366.612,131.36:0.0,0.0:0.0,1.09396e-06,1.0	0/0:23:0.999654:3,3:3-3,3-3:15,8,0,0:3,15:NULL:130.869:326.675,113.385:0.0,0.0:0.0,0.000206511,0.999796
+chr1	3943923	.	ATATATATATAT	.	.	.	END=3943934;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996744:6,6:6-6,6-6:12,17,0,0:6,12:NULL:198.475:366.612,131.36:0.0,0.0:2.90152e-22,0.00225795,0.997746	0/0:28:0.999959:6,6:6-6,6-6:18,10,0,0:6,18:NULL:165.23:326.675,113.385:0.0,0.0:1.10252e-32,4.65672e-05,0.999956
+chr1	3945858	.	AGAAAGAAAGAA	.	.	.	END=3945869;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.994776:3,3:3-3,3-3:11,13,0,0:3,11:NULL:164.432:366.612,131.36:0.0,0.0:9.3349e-38,0.00312694,0.996882	0/0:23:0.99866:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.299:326.675,113.385:0.0,0.0:1.5e-44,0.00084985,0.999156
+chr1	3949566	.	ACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=3949577;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0905103:15,15:3-15,3-15:4,18,0,0:15,4:NULL:186.702:366.612,131.36:4.19547,4.19547:0.0,0.533203,0.466901	0/0:35:0.999985:6,6:6-6,6-6:19,15,0,0:6,19:NULL:211.802:326.675,113.385:0.139319,0.139319:6e-45,2.42264e-05,0.999978
+chr1	3952215	.	AAACAAACAAACAAAC	.	.	.	END=3952230;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999761:4,4:3-4,3-4:15,20,0,4:4,15:2,2|3,2:270.441:366.612,131.36:0.345543,0.345543:0.0,0.000148609,0.999856	0/0:44:1.0:4,4:3-4,3-4:23,15,0,5:4,23:2,1|3,4:262.927:326.675,113.385:0.169767,0.169767:0.0,5.08034e-07,1.0
+chr1	3952974	.	AGACAGACAGAC	.	.	.	END=3952985;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:167.283:366.612,131.36:0.0,0.0:0.0,2.12211e-06,1.0	0/0:27:1.00001:3,3:3-3,3-3:21,4,0,2:3,21:2,2:131.297:326.675,113.385:0.0,0.0:0.0,1.24022e-06,1.0
+chr1	3955861	.	TAAATAAATAAA	.	.	.	END=3955872;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:231.683:366.612,131.36:0.0,0.0:0.0,2.6316e-07,1.0	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:147.329:326.675,113.385:0.0,0.0:0.0,4.77117e-07,1.0
+chr1	3956922	.	TAATAATAATAA	.	.	.	END=3956933;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999886:4,4:4-4,4-4:17,18,0,0:4,17:NULL:230.649:366.612,131.36:0.0,0.0:0.0,8.15416e-05,0.999919	0/0:49:1.0:4,4:4-4,4-4:31,16,0,2:4,31:3,2:286.016:326.675,113.385:0.0,0.0:0.0,2.13785e-09,1.0
+chr1	3960762	.	TGATGATGATGA	.	.	.	END=3960773;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:29,20,0,2:4,29:3,2:305.791:366.612,131.36:0.0,0.0:0.0,7.27355e-09,1.0	0/0:38:1.0:4,4:4-4,4-4:19,16,0,3:4,19:3,3:240.278:326.675,113.385:0.0,0.0:0.0,8.06454e-06,0.999994
+chr1	3967310	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3967353;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.306429:21,25:21-21,12-25:13,0,0,9:21,11|22,2:7,1|8,1|9,1|12,1|14,1|15,1|19,1|20,1|25,1:145.172:366.612,131.36:0.139319,4.93443:7.43147e-05,0.999921,4.24387e-06	1/0:33:0.71542:21,22:19-23,21-23:8,13,0,10:21,3|22,5:6,1|11,2|12,3|15,1|17,1|18,1|21,1:236.647:326.675,113.385:1.12802,0.516942:0.000163929,0.727214,0.272628
+chr1	3969294	.	CAAACAAACAAACAAA	.	.	.	END=3969309;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:20,14,0,2:4,20:3,2:225.215:366.612,131.36:0.0,0.0:0.0,6.4141e-06,0.999995	0/0:26:0.995609:4,4:4-4,4-4:12,14,0,0:4,12:NULL:169.889:326.675,113.385:0.0,0.0:6.9e-43,0.00336124,0.996648
+chr1	3972539	.	TTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTAT	.	.	END=3972558;RU=ttat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.00001:6,6:6-6,6-6:20,14,0,5:6,20:3,1|4,1|5,3:241.788:366.612,131.36:0.0,0.0:0.0,6.07488e-07,1.0	0/0:30:0.999802:5,5:5-5,5-5:16,12,0,2:5,16:4,2:188.376:326.675,113.385:0.0,0.0:0.0,0.000120794,0.99988
+chr1	3985823	.	CACACACACACA	CA	.	.	END=3985834;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:40:1.00001:6,6:6-6,6-6:21,14,0,5:6,21:4,1|5,4:249.701:326.675,113.385:0.0,0.0:0.0,1.83576e-06,1.0
+chr1	3992697	.	GCAGAGGCAGAGGCAGAG	.	.	.	END=3992714;RU=gcagag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:25,21,0,2:3,25:2,2:304.686:366.612,131.36:0.0,0.0:0.0,1.71221e-07,1.0	0/0:28:0.999906:3,3:3-3,3-3:17,11,0,0:3,17:NULL:169.069:326.675,113.385:0.0,0.0:0.0,7.31684e-05,0.999926
+chr1	3996489	.	ACACACACACACACACACACACAC	ACACACACACACAC	.	.	END=3996512;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:1.0:7,7:7-7,7-7:20,7,0,0:7,20:NULL:142.446:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:37:0.999811:12,12:11-12,11-12:16,11,0,9:12,16:7,3|8,3|10,1|11,2:240.974:326.675,113.385:0.169767,0.169767:1.96006e-27,8.2643e-05,0.999918
+chr1	3997264	.	TTATTATTATTA	.	.	.	END=3997275;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99985:4,4:4-4,4-4:16,10,0,0:4,16:NULL:155.95:366.612,131.36:0.0,0.0:0.0,0.00010225,0.999902	0/0:17:0.979968:4,4:4-4,4-4:9,8,0,0:4,9:NULL:108.54:326.675,113.385:0.0,0.0:1.74558e-27,0.0128414,0.987186
+chr1	3997282	.	TTTATTTATTTA	.	.	.	END=3997293;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:163.036:366.612,131.36:0.0,0.0:0.0,4.92314e-06,0.999995	0/0:19:0.999445:3,3:3-3,3-3:14,5,0,0:3,14:NULL:103.056:326.675,113.385:0.0,0.0:0.0,0.00029396,0.999706
+chr1	4000875	.	ATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=4000920;RU=at;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.405946:8,8:8-8,8-8:3,2,0,0:8,3:NULL:33.0948:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/2:4:0.224362:21,21:18-21,18-21:2,2,0,0:21,2:NULL:27.9122:326.675,113.385:0.650759,0.650759:0.768271,0.231586,0.000171727
+chr1	4008030	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4008077;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.39318:21,21:19-23,19-23:10,17,0,14:19,2|21,6|22,2:5,1|6,1|8,2|10,1|11,1|12,1|15,1|18,2|19,1|20,3:320.681:366.612,131.36:1.12445,1.12445:0.997836,0.00217262,4.18948e-16	0/2:40:0.262515:24,41:24-25,24-44:10,11,0,19:23,2|24,6|25,2:4,1|6,1|7,1|11,1|13,1|14,2|16,2|17,1|18,2|19,1|21,1|22,3|23,1|41,1:316.903:326.675,113.385:0.35561,8.37565:7.71648e-11,1.76728e-05,0.999986
+chr1	4008365	.	AAGAAAGAAAGA	.	.	.	END=4008376;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,20,0,0:3,24:NULL:269.288:366.612,131.36:0.0,0.0:0.0,3.01382e-07,1.0	0/0:23:0.999946:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.165:326.675,113.385:0.0,0.0:0.0,2.00184e-05,0.99998
+chr1	4012417	.	AAAGAAAGAAAG	.	.	.	END=4012428;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999412:3,3:3-3,3-3:14,19,0,0:3,14:NULL:232.822:366.612,131.36:0.0,0.0:0.0,0.000418171,0.999583	0/0:20:0.999853:3,3:3-3,3-3:16,4,0,0:3,16:NULL:98.1249:326.675,113.385:0.0,0.0:0.0,7.07918e-05,0.999933
+chr1	4014539	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4014563;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999984:5,5:5-5,5-5:17,15,0,3:5,17:2,1|3,1|4,1:234.113:366.612,131.36:0.0,0.0:0.0,2.31096e-05,0.999979	0/0:30:0.999961:5,5:5-5,5-5:18,12,0,0:5,18:NULL:178.102:326.675,113.385:0.0,0.0:0.0,4.37563e-05,0.999957
+chr1	4019418	.	TATTTATTTATT	.	.	.	END=4019429;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:29,20,0,3:3,29:2,3:324.942:366.612,131.36:0.0,0.0:0.0,5.3575e-09,1.0	0/0:31:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:183.726:326.675,113.385:0.0,0.0:0.0,9.13158e-06,0.999993
+chr1	4036362	.	CTGGAGCTGGAGCTGGAG	.	.	.	END=4036379;RU=ctggag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:241.53:366.612,131.36:0.0,0.0:0.0,5.28407e-07,1.0	0/0:58:1.0:3,3:3-3,3-3:33,23,0,2:3,33:2,1|3,1:350.227:326.675,113.385:0.0,0.0:0.0,3.79735e-10,1.0
+chr1	4039989	.	TTGTTGTTGTTGTTG	.	.	.	END=4040003;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999953:5,5:5-5,5-5:17,11,0,4:5,17:4,3|5,1:198.973:366.612,131.36:0.0,0.0:0.0,1.54565e-05,0.999986	0/0:18:0.99925:5,5:5-5,5-5:14,4,0,0:5,14:NULL:89.9581:326.675,113.385:0.0,0.0:2.772e-42,0.000409517,0.999591
+chr1	4042319	.	CTTCTTCTTCTT	.	.	.	END=4042330;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999908:4,4:4-4,4-4:17,17,0,0:4,17:NULL:225.388:366.612,131.36:0.0,0.0:0.0,5.97355e-05,0.999941	0/0:27:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:131.321:326.675,113.385:0.0,0.0:0.0,1.48064e-06,1.0
+chr1	4043396	.	AGAAAAGAAAAGAAA	.	.	.	END=4043410;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.986364:3,3:3-3,3-3:9,8,0,0:3,9:NULL:111.117:366.612,131.36:0.0,0.0:1.46513e-23,0.00742272,0.992595	0/0:26:0.998571:3,3:3-3,3-3:12,12,0,2:3,12:2,2:163.438:326.675,113.385:0.0,0.0:5.81734e-31,0.000729566,0.999272
+chr1	4043458	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4043521;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:16:0.0474443:24,32:12-34,14-34:0,8,0,8:NULL:6,1|11,1|12,1|17,1|22,1|24,2|32,1:139.366:366.612,131.36:5.90214,4.69152:1.60462e-07,0.855372,0.144712	2/2:12:0.0103348:28,28:20-31,20-31:0,2,0,7:NULL:6,1|8,1|12,1|14,1|15,1|24,1|28,1:72.7319:326.675,113.385:5.03241,5.03241:0.48066,0.444317,0.0751495
+chr1	4048648	.	GAGTGAGTGAGT	.	.	.	END=4048659;RU=gagt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:33,25,0,0:3,33:NULL:358.07:366.612,131.36:0.0,0.0:0.0,1.58187e-09,1.0	0/0:52:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:304.176:326.675,113.385:0.0,0.0:0.0,1.0279e-09,1.0
+chr1	4048769	.	AATTAATTAATTAATTAATTAATT	.	.	.	END=4048792;RU=aatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:21,19,0,2:6,21:3,1|4,1:279.964:366.612,131.36:0.0,0.0:0.0,5.16892e-06,0.999995	0/0:34:0.998984:6,6:5-6,5-6:15,18,0,0:6,15:NULL:229.027:326.675,113.385:0.334882,0.334882:1.13576e-37,0.000935996,0.999066
+chr1	4049279	.	AAACAAACAAACAAAC	.	.	.	END=4049294;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:18,19,0,7:4,18:3,7:299.67:366.612,131.36:0.0,0.0:0.0,8.99795e-06,0.999994	0/0:40:1.0:4,4:4-4,4-4:26,14,0,0:4,26:NULL:233.691:326.675,113.385:0.0,0.0:0.0,2.26657e-07,1.0
+chr1	4055341	.	ATTATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=4055376;RU=att;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999969:12,12:12-12,12-12:18,10,0,6:12,18:7,2|10,3|11,1:213.116:366.612,131.36:0.14072,0.14072:3.86333e-28,2.54812e-05,0.999978	0/0:39:0.999999:12,12:12-12,12-12:19,12,0,8:12,19:4,2|6,1|7,1|9,1|10,1|11,2:247.211:326.675,113.385:0.0,0.0:6.52832e-30,8.2327e-06,0.999994
+chr1	4056452	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4056505;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.17784:27,27:26-30,26-30:2,15,0,8:27,2:7,1|12,1|14,1|17,3|22,1|25,1:218.029:366.612,131.36:1.68439,1.68439:0.00145928,0.39155,0.607056	0/0:35:0.31158:27,27:23-28,23-28:3,21,0,9:27,3:7,1|10,1|16,1|17,2|21,1|23,2|27,1:279.724:326.675,113.385:2.33668,2.33668:7.22297e-12,0.453397,0.546713
+chr1	4060377	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=4060396;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.997495:6,6:6-6,6-6:12,10,0,6:6,12:4,3|5,2|6,1:184.752:366.612,131.36:0.0,0.0:0.0,0.000218626,0.999782	0/0:31:0.999979:5,5:5-5,5-5:18,10,0,3:5,18:3,2|4,1:185.131:326.675,113.385:0.0,0.0:0.0,1.62247e-05,0.999986
+chr1	4063131	.	CACACACACACACA	.	.	.	END=4063144;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:7,7:7-8,7-8:20,17,0,5:7,20:5,2|6,3:266.987:366.612,131.36:0.195027,0.195027:2.772e-42,2.99005e-06,1.0	0/0:38:1.0:7,7:7-7,7-7:24,14,0,0:7,24:NULL:227.233:326.675,113.385:0.0,0.0:0.0,4.36936e-07,1.0
+chr1	4065627	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4065661;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.00001:5,5:5-5,5-5:21,8,0,4:5,21:3,2|4,2:183.106:366.612,131.36:0.0,0.0:1.0,1.37486e-06,0.0	1/0:31:0.954031:5,7:5-7,7-7:13,10,0,8:5,2|7,11:3,2|4,1|5,1|6,4:213.486:326.675,113.385:0.985733,0.0:5.22102e-30,0.954154,0.0459211
+chr1	4065673	.	AAACAAACAAACAAAC	.	.	.	END=4065688;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:20,12,0,2:4,20:3,2:202.169:366.612,131.36:0.0,0.0:0.0,2.97336e-06,1.0	0/0:27:1.0:4,4:4-4,4-4:21,6,0,0:4,21:NULL:139.16:326.675,113.385:0.0,0.0:0.0,3.96176e-06,0.999995
+chr1	4069662	.	ATTAATTAATTAATTAATTAATTA	.	.	.	END=4069685;RU=atta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.999628:6,6:6-6,6-6:15,1,0,0:6,15:NULL:68.9845:366.612,131.36:0.0,0.0:6.7e-44,0.000183829,0.999819	0/0:10:0.748805:6,6:6-6,6-6:5,5,0,0:6,5:NULL:66.1588:326.675,113.385:0.0,0.0:4.26125e-15,0.160237,0.839837
+chr1	4070485	.	ATATATATATATAT	.	.	.	END=4070498;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.915977:7,7:7-8,7-8:16,14,0,0:7,13|8,3:NULL:199.227:366.612,131.36:0.398507,0.398507:8.33491e-19,0.000217094,0.999787	0/0:14:0.987133:7,7:7-7,7-7:10,4,0,0:7,10:NULL:76.1992:326.675,113.385:0.0,0.0:6.28506e-12,0.00772012,0.992296
+chr1	4070608	.	GTTAGTTAGTTA	.	.	.	END=4070619;RU=gtta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.416:366.612,131.36:0.0,0.0:0.0,1.74971e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:31,5,0,2:3,31:2,2:183.313:326.675,113.385:0.0,0.0:0.0,1.47285e-09,1.0
+chr1	4086252	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=4086285;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:0.99982:13,13:13-13,13-13:24,18,0,11:12,3|13,21:6,1|7,1|8,2|9,1|10,2|11,2|12,2:360.267:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/0:35:0.998783:17,17:14-17,14-17:15,8,0,10:17,15:4,1|7,3|8,1|9,3|11,1|14,1:218.492:326.675,113.385:0.970701,0.970701:2.62421e-20,0.000455687,0.999546
+chr1	4088150	.	GTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4088169;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.994246:6,6:6-6,6-6:11,14,0,7:6,11:2,1|3,3|4,1|5,2:226.958:366.612,131.36:0.0,0.0:0.0,0.000958557,0.999044	0/0:69:1.0:5,5:5-5,5-5:34,27,0,8:5,34:2,1|4,7:447.005:326.675,113.385:0.0,0.0:0.0,3.86099e-10,1.0
+chr1	4090397	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4090442;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:41:0.269344:26,34:26-27,26-37:6,17,0,17:26,4|27,2:6,1|7,1|9,2|10,1|12,1|13,1|14,2|15,1|17,1|18,1|19,1|25,3|34,1:335.572:366.612,131.36:0.478127,3.78591:2.6192e-41,8.59452e-08,1.0	1/0:35:0.726241:22,23:21-23,23-23:11,5,0,17:21,2|22,3|23,6:6,2|7,1|8,2|12,2|13,1|14,2|16,1|20,2|21,3|22,1:238.146:326.675,113.385:0.754297,0.314035:7.48832e-05,0.783309,0.216657
+chr1	4091063	.	ACAACAACAACAACA	.	.	.	END=4091077;RU=aca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999691:5,5:5-5,5-5:15,11,0,0:5,15:NULL:159.729:366.612,131.36:0.0,0.0:2.7e-44,0.000197065,0.999804	0/0:42:1.0:5,5:5-5,5-5:25,14,0,3:5,25:4,3:249.245:326.675,113.385:0.0,0.0:0.0,7.75351e-08,1.0
+chr1	4095201	.	AAGGAAGGAAGG	.	.	.	END=4095212;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:24,19,0,4:3,24:2,4:291.104:366.612,131.36:0.0,0.0:0.0,1.63943e-07,1.0	0/0:23:0.999568:3,3:3-3,3-3:14,9,0,0:3,14:NULL:136.301:326.675,113.385:0.0,0.0:0.0,0.000262446,0.999742
+chr1	4095413	.	TTTGTTTGTTTGTTTG	.	.	.	END=4095428;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:24,11,0,2:4,24:3,2:208.474:366.612,131.36:0.0,0.0:0.0,2.60547e-07,1.0	0/0:33:0.999912:4,4:4-4,4-4:16,11,0,6:4,16:3,6:204.035:326.675,113.385:0.0,0.0:0.0,3.98243e-05,0.999963
+chr1	4100799	.	ATTTTATTTTATTTTATTTTATTTTATTTT	ATTTTATTTTATTTTATTTTATTTT	.	.	END=4100828;RU=atttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:5,5:5-5,5-5:28,11,0,0:5,28:NULL:216.446:366.612,131.36:0.314035,0.314035:1.0,1.76026e-08,0.0	0/0:30:0.999887:6,6:6-7,6-7:16,9,0,4:6,16:2,1|4,1|5,2:174.799:326.675,113.385:0.284901,0.284901:1.77483e-39,5.38703e-05,0.999948
+chr1	4101417	.	TGTTGTTGTTGTTGT	.	.	.	END=4101431;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999503:5,5:5-6,5-6:14,10,0,3:5,14:3,1|4,2:168.403:366.612,131.36:0.390807,0.390807:1.25007e-37,0.000219022,0.999782	0/0:24:0.999739:5,5:5-5,5-5:15,5,0,4:5,15:3,2|4,2:132.402:326.675,113.385:0.0,0.0:2.26489e-40,9.25796e-05,0.99991
+chr1	4107366	.	TATATATATATA	TATATATA	.	.	END=4107377;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999018:4,4:4-4,4-4:14,12,0,0:4,14:NULL:169.247:366.612,131.36:0.0,0.0:0.999828,0.000172148,0.0	0/0:25:0.999995:6,6:6-6,6-6:19,5,0,0:6,19:NULL:125.715:326.675,113.385:0.139319,0.139319:1.95623e-34,1.41815e-05,0.999987
+chr1	4112131	.	GCTGCTGCTGCT	.	.	.	END=4112142;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,16,0,2:4,23:3,2:252.469:366.612,131.36:0.0,0.0:0.0,5.36964e-07,1.0	0/0:22:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:102.343:326.675,113.385:0.0,0.0:0.0,1.31815e-05,0.999987
+chr1	4114636	.	CTATCTATCTAT	.	.	.	END=4114647;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:20,14,0,4:3,20:2,4:231.282:366.612,131.36:0.0,0.0:0.0,3.55721e-06,1.0	0/0:47:1.0:3,3:3-3,3-3:27,18,0,2:3,27:2,2:283.559:326.675,113.385:0.0,0.0:0.0,3.29652e-08,1.0
+chr1	4116064	.	CTCTCTCTCTCT	CTCTCTCTCT	.	.	END=4116075;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:5,5:5-5,5-5:29,12,0,0:5,29:NULL:225.742:366.612,131.36:0.0,0.0:1.0,1.27345e-08,0.0	0/0:32:0.999995:6,6:5-6,5-6:20,11,0,0:6,20:NULL:178.829:326.675,113.385:0.236383,0.236383:0.0,1.40272e-05,0.999987
+chr1	4119174	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4119245;RU=aaag;PERIOD=4;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0352826:14,14:14-18,14-18:0,9,0,0:NULL:NULL:85.5332:366.612,131.36:0.91647,0.91647:0.411079,0.463977,0.125045	0/0:26:0.407903:18,18:15-18,15-18:4,10,0,10:18,4:3,1|4,1|5,1|9,2|10,2|13,2|16,1:184.936:326.675,113.385:1.39643,1.39643:6.16298e-09,0.46418,0.535927
+chr1	4121252	.	TGTCTGTCTGTC	.	.	.	END=4121263;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:215.764:366.612,131.36:0.0,0.0:0.0,3.36844e-06,1.0	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:347.076:326.675,113.385:0.0,0.0:0.0,5.83131e-09,1.0
+chr1	4122075	.	AAATAAATAAAT	.	.	.	END=4122086;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999747:3,3:3-3,3-3:15,19,0,0:3,15:NULL:238.814:366.612,131.36:0.0,0.0:0.0,0.000190552,0.999811	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:181.442:326.675,113.385:0.0,0.0:0.0,3.61167e-07,1.0
+chr1	4122666	.	ATCTATCTATCT	.	.	.	END=4122677;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999583:3,3:3-3,3-3:15,18,0,2:3,15:2,2:240.054:366.612,131.36:0.0,0.0:0.0,0.000271211,0.999729	0/0:44:1.0:3,3:3-3,3-3:26,14,0,4:3,26:2,4:261.757:326.675,113.385:0.0,0.0:0.0,3.76513e-08,1.0
+chr1	4123576	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=4123599;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.00001:5,5:5-5,5-5:22,14,0,6:5,22:2,1|3,2|4,3:254.229:366.612,131.36:0.0,0.0:1.0,1.48473e-06,0.0	0/0:48:1.0:6,6:6-6,6-6:25,13,0,10:6,25:2,1|3,5|4,2|5,2:286.859:326.675,113.385:0.0,0.0:0.0,9.49871e-08,1.0
+chr1	4123957	.	TCTCTCTCTCTCTC	TCTCTCTCTCTC	.	.	END=4123970;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.00002:6,6:6-13,6-13:20,9,0,0:6,20:NULL:164.174:366.612,131.36:3.50358,3.50358:0.999993,1.07436e-05,6.70284e-33	0/0:38:1.0:7,7:7-7,7-7:27,10,0,0:7,27:NULL:209.815:326.675,113.385:0.0,0.0:9.8278e-36,1.16556e-07,1.0
+chr1	4129715	.	CTTTCTTTCTTT	.	.	.	END=4129726;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997594:3,3:3-3,3-3:12,14,0,0:3,12:NULL:170.303:366.612,131.36:0.0,0.0:2.2163e-40,0.00131315,0.998693	0/0:41:1.00001:3,3:3-3,3-3:20,16,0,5:3,20:2,5:263.411:326.675,113.385:0.0,0.0:0.0,3.28561e-06,1.0
+chr1	4129886	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4129913;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.997906:6,6:6-6,6-6:12,7,0,3:6,12:5,3:135.019:366.612,131.36:0.0,0.0:0.998541,0.00146427,3.03668e-26	0/0:59:1.0:7,7:7-7,7-7:29,19,0,10:7,29:2,2|3,3|4,1|5,1|6,3:361.213:326.675,113.385:0.0,0.0:0.0,9.64579e-09,1.0
+chr1	4129930	.	TTGTTGTTGTTG	.	.	.	END=4129941;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99999:4,4:4-4,4-4:18,9,0,2:4,18:3,2:165.39:366.612,131.36:0.0,0.0:0.0,1.34504e-05,0.999987	0/0:62:1.0:4,4:4-4,4-4:33,27,0,2:4,33:3,2:382.399:326.675,113.385:0.0,0.0:0.0,7.35907e-10,1.0
+chr1	4140418	.	TTTGTTTGTTTG	.	.	.	END=4140429;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:188.772:366.612,131.36:0.0,0.0:0.0,5.09731e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:204.552:326.675,113.385:0.0,0.0:0.0,8.95016e-06,0.999994
+chr1	4140449	.	TTTGGTTTGGTTTGG	.	.	.	END=4140463;RU=tttgg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:161.345:366.612,131.36:0.0,0.0:0.0,6.67801e-06,0.999994	0/0:28:0.999782:3,3:3-3,3-3:15,13,0,0:3,15:NULL:180.456:326.675,113.385:0.0,0.0:0.0,0.000169065,0.999834
+chr1	4142498	.	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	.	.	END=4142575;RU=cag;PERIOD=3;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.105745:27,27:26-28,26-28:0,20,0,17:NULL:6,1|8,1|14,1|15,1|16,1|17,2|18,1|19,2|20,1|21,1|22,1|23,1|25,1|27,2:318.949:366.612,131.36:0.964013,0.964013:3.46523e-16,0.372634,0.627414	0/0:62:0.673074:26,26:25-27,25-27:4,25,0,31:26,4:4,1|5,1|6,1|7,2|8,1|9,3|10,1|11,1|12,1|13,2|14,2|15,1|17,1|18,1|19,1|20,2|21,1|22,3|23,1|24,2|25,2:482.865:326.675,113.385:0.678922,0.678922:1.65866e-07,0.112299,0.887802
+chr1	4144308	.	TTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=4144334;RU=ttg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999524:10,10:8-11,8-11:15,11,0,2:10,15:6,1|9,1:179.861:366.612,131.36:0.743036,0.743036:0.0,0.000188528,0.999812	0/0:48:1.0:9,9:9-9,9-9:28,12,0,8:9,28:3,2|5,1|6,1|7,3|8,1:286.039:326.675,113.385:0.0,0.0:0.0,1.41547e-08,1.0
+chr1	4144510	.	TTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTTTTGTT,TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	END=4144529;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:1.0:5,8:5-5,8-8:13,7,0,0:5,7|8,6:NULL:126.229:366.612,131.36:0.0,0.29703:0.0,4.58966e-24,1.0	0/0:53:0.993702:4,4:4-6,4-6:33,17,0,3:4,33:3,2|6,1:323.727:326.675,113.385:0.81164,0.81164:0.0,9.36676e-10,1.0
+chr1	4148898	.	TTTATTTTATTTTAT	.	.	.	END=4148912;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.419:366.612,131.36:0.0,0.0:0.0,6.91862e-06,0.999994	0/0:35:1.0:3,3:3-3,3-3:22,13,0,0:3,22:NULL:215.568:326.675,113.385:0.0,0.0:0.0,3.91503e-06,0.999995
+chr1	4153288	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=4153307;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.789864:5,5:5-5,5-5:5,19,0,2:5,5:3,2:210.391:366.612,131.36:0.19802,0.19802:1.59991e-17,0.15992,0.840154	0/0:45:1.00001:5,5:5-5,5-5:20,17,0,7:5,20:2,1|3,2|4,4:288.974:326.675,113.385:0.0990099,0.0990099:0.0,3.58766e-06,1.0
+chr1	4163090	.	ATTATTATTATT	.	.	.	END=4163101;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999898:4,4:4-4,4-4:16,17,0,3:4,16:3,3:235.259:366.612,131.36:0.0,0.0:0.0,4.16304e-05,0.999962	0/0:45:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:267.259:326.675,113.385:0.0,0.0:0.0,1.23235e-07,1.0
+chr1	4168643	.	TTTATTTATTTA	.	.	.	END=4168654;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:240.263:366.612,131.36:0.0,0.0:0.0,1.01644e-10,1.0	0/0:35:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:217.241:326.675,113.385:0.0,0.0:0.0,7.03676e-06,0.999994
+chr1	4173459	.	ATTTATTTATTTATTT	.	.	.	END=4173474;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:21,17,0,2:4,21:3,2:258.487:366.612,131.36:0.0,0.0:0.0,4.15327e-06,0.999995	0/0:25:0.997971:4,4:4-4,4-4:12,9,0,4:4,12:3,4:159.204:326.675,113.385:0.0,0.0:3.14464e-38,0.000692925,0.99931
+chr1	4185941	.	TTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=4185952;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.984525:4,4:4-4,4-4:9,7,0,3:4,9:2,1|3,2:127.34:366.612,131.36:0.0,0.0:0.0,0.0021856,0.997821	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:159.974:326.675,113.385:0.0,0.0:0.0,3.14951e-06,1.0
+chr1	4186148	.	TAAATAAATAAA	.	.	.	END=4186159;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.96708:3,3:3-3,3-3:8,14,0,0:3,8:NULL:160.325:366.612,131.36:0.0,0.0:3.57923e-27,0.0206187,0.979424	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:184.863:326.675,113.385:0.0,0.0:0.0,3.44099e-07,1.0
+chr1	4195196	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG	.	.	END=4195231;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.998545:8,8:8-8,8-8:13,16,0,11:8,13:4,1|5,4|6,2|7,4:285.784:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:45:0.512226:18,18:17-18,17-18:16,12,0,16:17,4|18,12:5,3|6,1|7,1|11,3|13,2|14,1|15,2|16,3:312.952:326.675,113.385:0.489674,0.489674:1.30546e-13,0.487717,0.512341
+chr1	4196255	.	TTTGTTTGTTTG	.	.	.	END=4196266;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:2-3,2-3:29,23,0,0:3,29:NULL:332.851:366.612,131.36:0.19802,0.19802:0.0,1.48593e-08,1.0	0/0:46:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:263.701:326.675,113.385:0.0,0.0:0.0,8.27065e-09,1.0
+chr1	4199614	.	AATTAATTAATT	.	.	.	END=4199625;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.998573:3,3:3-3,3-3:13,11,0,0:3,13:NULL:150.683:366.612,131.36:0.0,0.0:2.367e-42,0.000925454,0.99908	0/0:16:0.990811:3,3:3-3,3-3:10,6,0,0:3,10:NULL:89.9067:326.675,113.385:0.0,0.0:5.26693e-33,0.00436205,0.99565
+chr1	4201150	.	TAAATAAATAAA	.	.	.	END=4201161;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.664:366.612,131.36:0.0,0.0:0.0,3.7601e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:164.257:326.675,113.385:0.0,0.0:0.0,7.31605e-08,1.0
+chr1	4201564	.	AAACAAACAAAC	.	.	.	END=4201575;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:29,24,0,0:3,29:NULL:333.733:366.612,131.36:0.0,0.0:0.0,2.26288e-08,1.0	0/0:49:1.0:3,3:3-3,3-3:30,17,0,2:3,30:2,2:288.108:326.675,113.385:0.0,0.0:0.0,4.0014e-09,1.0
+chr1	4202537	.	AAATAAATAAAT	.	.	.	END=4202548;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999995:3,3:3-3,3-3:19,16,0,0:3,19:NULL:222.381:366.612,131.36:0.0,0.0:0.0,1.16407e-05,0.999987	0/0:34:1.0:3,3:3-3,3-3:23,9,0,2:3,23:2,2:186.422:326.675,113.385:0.0,0.0:0.0,3.56569e-07,1.0
+chr1	4208149	.	AACAAACAAACA	.	.	.	END=4208160;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999617:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.19:366.612,131.36:0.0,0.0:0.0,0.000186105,0.999818	0/0:30:0.999891:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.852:326.675,113.385:0.0,0.0:0.0,6.16608e-05,0.999941
+chr1	4212306	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=4212333;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999851:5,5:5-5,5-5:16,21,0,4:5,16:2,1|3,1|4,2:287.361:366.612,131.36:0.0,0.0:0.999971,3.26505e-05,6.2e-44	0/0:30:1.0:7,7:7-7,7-7:21,9,0,0:7,21:NULL:169.604:326.675,113.385:0.0,0.0:0.0,4.44128e-06,0.999995
+chr1	4215533	.	ATACATACATACATACATACATACATACATACATAC	ATACATACATACATACATACATACATACATACATACATAC	.	.	END=4215568;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.995602:10,10:9-10,9-10:11,19,0,18:10,11:2,1|3,2|4,4|5,2|6,4|7,2|8,2|9,1:355.453:366.612,131.36:0.323567,0.323567:1.31864e-37,0.00111544,0.99889	0/0:43:0.993646:9,9:9-9,9-9:11,13,0,19:9,11:3,3|4,3|5,2|6,3|7,5|8,3:308.544:326.675,113.385:0.0,0.0:2.63742e-21,0.00276035,0.997246
+chr1	4216566	.	TGGGTGGGTGGG	.	.	.	END=4216577;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:35,22,0,0:3,35:NULL:332.45:366.612,131.36:0.0,0.0:0.0,2.70489e-10,1.0	0/0:73:1.0:3,3:3-3,3-3:41,32,0,0:3,41:NULL:443.123:326.675,113.385:0.0,0.0:0.0,3.03466e-12,1.0
+chr1	4219533	.	ACCCACCCACCC	.	.	.	END=4219544;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.935437:3,3:3-3,3-3:7,10,0,0:3,7:NULL:119.381:366.612,131.36:0.0,0.0:1.49863e-20,0.0345989,0.965464	0/0:30:0.961038:3,3:3-3,3-3:8,22,0,0:3,8:NULL:225.816:326.675,113.385:0.0,0.0:2.78787e-23,0.0278937,0.972158
+chr1	4222234	.	TGATGATGATGA	.	.	.	END=4222245;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999847:4,4:4-4,4-4:16,11,0,0:4,16:NULL:165.48:366.612,131.36:0.0,0.0:0.0,0.000104117,0.999896	0/0:45:1.00001:4,4:4-4,4-4:20,21,0,4:4,20:3,4:302.025:326.675,113.385:0.0,0.0:0.0,3.68792e-06,1.0
+chr1	4239423	.	AAACAAACAAACAAACAAAC	.	.	.	END=4239442;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:5,5:5-5,5-5:26,16,0,4:5,26:2,1|3,2|4,1:279.305:366.612,131.36:0.0,0.0:0.0,6.7303e-08,1.0	0/0:44:1.00001:5,5:5-5,5-5:22,14,0,8:5,22:2,3|3,3|4,2:271.56:326.675,113.385:0.0,0.0:0.0,6.11487e-07,1.0
+chr1	4243137	.	TCTGTCTGTCTG	.	.	.	END=4243148;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:213.688:366.612,131.36:0.0,0.0:0.0,5.45651e-07,1.0	0/0:59:1.0:3,3:3-3,3-3:29,26,0,4:3,29:2,4:378.044:326.675,113.385:0.0,0.0:0.0,7.81909e-09,1.0
+chr1	4243659	.	TTGTTGTTGTTGTTG	.	.	.	END=4243673;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:5,5:5-5,5-5:31,21,0,2:5,31:4,2:327.119:366.612,131.36:0.0,0.0:0.0,1.94798e-09,1.0	0/0:48:1.0:5,5:5-5,5-5:38,6,0,3:5,38:4,3:224.836:326.675,113.385:0.0990099,0.0990099:0.0,1.20459e-11,1.0
+chr1	4244758	.	AACAACAACAAC	.	.	.	END=4244769;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:31,16,0,3:4,31:3,3:293.809:366.612,131.36:0.0,0.0:0.0,2.75083e-09,1.0	0/0:45:1.0:4,4:4-4,4-4:27,15,0,3:4,27:3,3:266.465:326.675,113.385:0.0,0.0:0.0,4.53214e-08,1.0
+chr1	4247940	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4247969;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:1.0:11,11:11-11,11-11:31,6,0,6:10,3|11,28:7,2|8,2|10,1|11,1:236.495:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/2:48:0.301817:15,19:15-15,15-20:20,10,0,17:14,2|15,18:5,2|6,1|7,1|9,1|10,5|11,1|12,1|14,4|19,1:327.643:326.675,113.385:0.0,2.03272:2.09358e-25,5.07357e-06,0.999995
+chr1	4261751	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4261794;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.487749:8,8:6-10,6-10:4,20,0,0:8,4:NULL:198.192:366.612,131.36:1.16916,1.16916:0.958826,0.0412442,5.35052e-12	0/0:27:0.982188:11,11:11-11,11-11:8,7,0,12:11,8:2,1|3,1|5,3|7,2|8,1|10,2|11,2:184.845:326.675,113.385:0.0,0.0:2.19061e-33,0.00320668,0.9968
+chr1	4269351	.	AAATAAATAAAT	.	.	.	END=4269362;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:320.916:366.612,131.36:0.0,0.0:0.0,8.01632e-08,1.0	0/0:54:1.0:3,3:3-3,3-3:40,12,0,2:3,40:2,2:283.617:326.675,113.385:0.0,0.0:0.0,6.96112e-12,1.0
+chr1	4275434	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACA	.	.	END=4275483;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:52:0.684601:20,21:19-22,19-22:10,18,0,23:19,3|20,3|21,4:7,1|8,3|10,1|11,3|12,1|13,2|14,1|15,2|16,2|17,1|18,1|19,4|20,1:401.399:366.612,131.36:0.840244,0.766416:0.999986,1.54866e-05,5.87923e-25	0/0:47:0.855347:25,25:24-26,24-26:13,10,0,22:24,3|25,10:6,2|7,1|8,3|9,1|10,2|14,1|15,1|16,2|17,1|18,1|20,1|21,3|22,2|23,1:332.119:326.675,113.385:0.579017,0.579017:1.34034e-09,0.14187,0.858217
+chr1	4275539	.	ATAATAATAATA	.	.	.	END=4275550;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999984:4,4:4-4,4-4:19,10,0,0:4,19:NULL:165.443:366.612,131.36:0.0,0.0:0.0,2.29498e-05,0.999979	0/0:33:1.0:4,4:4-4,4-4:26,7,0,0:4,26:NULL:164.927:326.675,113.385:0.0,0.0:0.0,1.25792e-07,1.0
+chr1	4281780	.	CAAACAAACAAA	.	.	.	END=4281791;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:290.686:366.612,131.36:0.0,0.0:0.0,3.08009e-09,1.0	0/0:53:1.0:3,3:3-3,3-3:38,15,0,0:3,38:NULL:284.782:326.675,113.385:0.0,0.0:0.0,2.32525e-11,1.0
+chr1	4285029	.	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	.	.	END=4285113;RU=gaagg;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.0829037:17,17:5-20,5-20:0,19,0,17:NULL:4,2|5,2|6,1|7,1|10,1|12,2|14,4|15,2|17,2:296.393:366.612,131.36:3.15082,3.15082:5.1637e-16,0.546962,0.453146	1/0:31:0.99898:10,17:5-17,17-17:5,9,0,16:10,2|17,3:3,1|4,1|5,1|6,1|10,2|11,1|12,3|13,2|15,3|16,1:234.259:326.675,113.385:3.27335,0.372309:2.04025e-06,1.0,7.76487e-37
+chr1	4285247	.	GGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGG	.	.	.	END=4285300;RU=gggaaaggggaagaaagg;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.996535:3,3:3-3,3-3:16,21,0,0:3,16:NULL:264.925:366.612,131.36:0.278639,0.278639:3.66962e-18,0.00345612,0.996551	0/0:34:0.999955:3,3:3-3,3-3:17,14,0,3:3,17:2,1|3,2:222.686:326.675,113.385:0.0,0.0:4.41303e-37,5.37061e-05,0.999948
+chr1	4285317	.	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG,GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	.	.	END=4285436;RU=gaaag;PERIOD=5;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:46:0.0760872:25,25:18-26,18-26:0,20,0,26:NULL:3,1|4,3|5,1|6,2|7,2|9,2|10,2|11,1|13,1|14,2|15,1|16,1|17,1|19,1|22,1|23,3|24,1:368.821:366.612,131.36:2.10326,2.10326:4.20639e-09,0.458576,0.541533	1/1:23:0.0290068:23,23:10-24,10-24:0,7,0,16:NULL:4,2|5,1|6,2|10,3|11,1|13,1|14,1|15,2|18,1|22,1|23,1:178.687:326.675,113.385:4.1875,4.1875:0.291361,0.614,0.094706
+chr1	4287727	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4287770;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.704682:22,22:21-23,21-23:10,14,0,14:21,4|22,6:5,1|7,2|11,1|12,2|13,1|15,2|19,3|20,1|22,1:291.615:366.612,131.36:0.558156,0.558156:2.0267e-13,0.266838,0.733165	1/0:38:0.78164:20,22:20-22,22-22:8,14,0,16:20,3|22,5:5,2|8,2|9,1|10,1|11,3|13,2|16,1|18,3|21,1:296.738:326.675,113.385:0.973726,0.0990099:1.1863e-05,0.889694,0.11039
+chr1	4288691	.	TATATATATATA	TATATATATATATATA	.	.	END=4288702;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.697637:8,8:8-9,8-9:5,3,0,0:8,5:NULL:50.136:366.612,131.36:0.452422,0.452422:1.82103e-14,0.0505904,0.949488	0/0:20:0.999868:6,6:6-8,6-8:17,2,0,0:6,17:NULL:89.5175:326.675,113.385:0.390054,0.390054:6.16941e-24,6.33034e-05,0.99994
+chr1	4290243	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4290302;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:41:0.889527:16,16:11-16,11-16:7,18,0,14:16,7:2,1|4,1|5,2|6,1|7,2|8,1|11,3|12,1|15,2:307.69:366.612,131.36:2.34317,2.34317:7.37063e-31,0.0402759,0.959793	1/1:33:0.994339:14,14:13-14,13-14:11,13,0,8:14,11:3,1|5,1|7,1|9,1|11,1|12,2|13,1:230.879:326.675,113.385:0.169767,0.169767:0.99755,0.00245547,3.53208e-13
+chr1	4290307	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4290346;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.535683:19,19:18-19,18-19:10,17,0,7:18,3|19,7:7,1|10,1|11,1|13,1|16,1|17,1|18,1:269.431:366.612,131.36:0.498011,0.498011:0.980544,0.0194926,2.83766e-07	0/0:29:0.727856:20,20:18-20,18-20:5,12,0,11:20,5:7,1|9,3|10,2|12,1|16,1|17,1|19,1|20,1:224.134:326.675,113.385:0.851255,0.851255:1.73201e-15,0.0946413,0.905458
+chr1	4292154	.	TGTGTGTGTGTGTG	.	.	.	END=4292167;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999993:7,7:7-7,7-7:28,19,0,6:6,2|7,26:4,1|5,2|6,3:336.129:366.612,131.36:0.0,0.0:0.0,1.02349e-05,0.999993	0/0:35:1.00001:7,7:7-7,7-7:22,11,0,0:7,22:NULL:184.467:326.675,113.385:0.139319,0.139319:4.9e-44,2.60359e-06,1.0
+chr1	4293061	.	ATTTATTTATTT	.	.	.	END=4293072;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:3,3:3-3,3-3:21,20,0,3:3,21:2,3:284.62:366.612,131.36:0.0,0.0:0.0,1.84527e-06,1.0	0/0:25:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:118.827:326.675,113.385:0.0,0.0:0.0,2.20646e-06,1.0
+chr1	4297521	.	AAATAAATAAAT	.	.	.	END=4297532;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:2-3,2-3:24,14,0,2:3,24:2,2:241.549:366.612,131.36:0.21692,0.21692:0.0,2.96497e-07,1.0	0/0:29:0.999683:3,3:3-3,3-3:14,12,0,3:3,14:2,3:188.508:326.675,113.385:0.0,0.0:0.0,0.000159458,0.999842
+chr1	4298525	.	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	.	.	END=4298564;RU=aggg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.324771:10,11:10-12,10-12:2,14,0,8:10,2:2,1|6,1|7,1|8,1|9,2|11,2:195.225:366.612,131.36:0.91978,0.752475:2.09996e-18,0.00323195,0.996777	0/0:18:0.445983:10,10:8-10,8-10:3,9,0,5:10,3:3,1|6,1|7,1|8,1|9,1:135.037:326.675,113.385:0.963606,0.963606:8.30868e-05,0.335561,0.664371
+chr1	4303708	.	GTTTGTTTGTTT	.	.	.	END=4303719;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99999:3,3:3-3,3-3:18,8,0,0:3,18:NULL:143.671:366.612,131.36:0.0,0.0:0.0,1.81234e-05,0.999985	0/0:47:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:254.878:326.675,113.385:0.0,0.0:0.0,7.89661e-10,1.0
+chr1	4304220	.	CTTCCTTCCTTC	.	.	.	END=4304231;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:244.536:366.612,131.36:0.0,0.0:0.0,2.37142e-06,1.0	0/0:38:0.999578:3,3:2-3,2-3:14,21,0,2:3,14:2,2:262.18:326.675,113.385:0.46122,0.46122:0.0,0.000264883,0.999736
+chr1	4304531	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=4304562;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.00001:7,7:5-7,5-7:22,22,0,8:7,22:3,2|4,2|5,3|6,1:353.905:366.612,131.36:0.410384,0.410384:1.0,1.43191e-06,1.3794e-39	0/0:47:1.00001:8,8:8-8,8-8:22,16,0,9:8,22:3,1|4,1|5,1|6,1|7,5:308.08:326.675,113.385:0.0,0.0:0.0,7.07656e-07,1.0
+chr1	4305067	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4305100;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0445602:29,29:12-31,12-31:0,14,0,14:NULL:5,3|7,1|8,1|9,1|11,2|16,1|17,1|20,1|27,1|28,1|29,1:235.738:366.612,131.36:4.68217,4.68217:2.11204e-37,0.105213,0.894887	0/0:26:0.728765:17,17:16-19,16-19:5,9,0,10:17,5:7,1|9,1|12,1|13,1|15,4|16,2:182.064:326.675,113.385:1.0865,1.0865:3.43413e-08,0.073556,0.926541
+chr1	4307140	.	AATAAAATAAAATAA	.	.	.	END=4307154;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:25,18,0,2:3,25:2,2:272.688:366.612,131.36:0.0,0.0:0.0,9.41783e-08,1.0	0/0:27:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:138.153:326.675,113.385:0.0,0.0:0.0,2.24604e-06,1.0
+chr1	4307673	.	TTGTTGTTGTTG	.	.	.	END=4307684;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:231.194:366.612,131.36:0.0,0.0:0.0,1.69388e-06,1.0	0/0:40:1.0:4,4:3-4,3-4:26,13,0,0:4,26:NULL:228.879:326.675,113.385:0.195027,0.195027:0.0,1.37826e-07,1.0
+chr1	4309252	.	TTTGTTTGTTTGTTTG	.	.	.	END=4309267;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:20,16,0,3:4,20:3,3:246.126:366.612,131.36:0.0,0.0:0.0,2.00039e-06,1.0	0/0:49:1.0:4,4:4-4,4-4:35,9,0,5:4,35:2,3|3,2:261.591:326.675,113.385:0.0,0.0:0.0,1.11506e-10,1.0
+chr1	4312047	.	AATAATAATAAT	AAT	.	.	END=4312058;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0756969:1,1:1-4,1-4:0,18,0,0:NULL:NULL:166.744:366.612,131.36:1.15812,1.15812:0.566582,0.379435,0.0541254	0/0:23:0.999633:4,4:4-4,4-4:15,8,0,0:4,15:NULL:131.449:326.675,113.385:0.0,0.0:0.0,0.000241621,0.999759
+chr1	4315806	.	TTTATTTATTTA	.	.	.	END=4315817;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:18,13,0,0:3,18:NULL:189.952:366.612,131.36:0.0,0.0:0.0,1.03387e-05,0.999993	0/0:16:0.961691:3,3:3-3,3-3:8,8,0,0:3,8:NULL:104.974:326.675,113.385:0.0,0.0:2.31783e-26,0.0214061,0.978636
+chr1	4318869	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	END=4318923;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.998032:7,7:7-7,7-7:13,11,0,0:7,13:NULL:155.431:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.997389:11,11:11-11,11-11:11,11,0,11:11,11:3,1|5,1|8,1|9,3|10,5:224.136:326.675,113.385:0.0,0.0:3.92039e-33,0.00105901,0.998945
+chr1	4328602	.	GTGGGTGGGTGGGTGG	.	.	.	END=4328617;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:4,4:4-4,4-4:27,29,0,0:4,27:NULL:356.43:366.612,131.36:0.0,0.0:0.0,9.63734e-08,1.0	0/0:38:1.0:4,4:4-4,4-4:22,16,0,0:4,22:NULL:233.942:326.675,113.385:0.0,0.0:0.0,4.15676e-06,0.999995
+chr1	4328704	.	ATAAATAAATAA	.	.	.	END=4328715;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:36,14,0,0:3,36:NULL:264.255:366.612,131.36:0.0,0.0:0.0,1.35046e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:197.266:326.675,113.385:0.0,0.0:0.0,6.85972e-06,0.999994
+chr1	4329272	.	TGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=4329291;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.999961:5,5:5-5,5-5:17,12,0,0:5,17:NULL:178.516:366.612,131.36:0.0,0.0:0.0,3.54679e-05,0.999964	0/0:29:0.999204:4,4:3-4,3-4:13,11,0,4:4,13:3,4:178.448:326.675,113.385:0.40582,0.40582:6.01e-43,0.000413943,0.99959
+chr1	4329605	.	GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	GGAAGGGAAGGGAAGGGAAG,GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	.	.	END=4329684;RU=ggaag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00451592:4,4:1-5,1-5:0,6,0,0:NULL:NULL:50.7807:366.612,131.36:1.38953,1.38953:0.539407,0.424989,0.0357611	2/2:1:0.000317116:17,17:17-17,17-17:0,1,0,0:NULL:NULL:8.30332:326.675,113.385:0.0,0.0:0.0516048,0.397132,0.551422
+chr1	4331004	.	AGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4331017;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0229887:22,22:21-24,21-24:0,8,0,3:NULL:6,1|8,1|20,1:96.2491:366.612,131.36:1.14911,1.14911:0.0,0.0,1.0	0/0:29:0.997633:7,7:7-8,7-8:13,15,0,0:7,13:NULL:187.971:326.675,113.385:0.437216,0.437216:1.60787e-27,0.00151059,0.998496
+chr1	4331408	.	TATTATTATTATTATTAT	TAT	.	.	END=4331425;RU=tat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0117972:1,1:1-4,1-4:0,8,0,0:NULL:NULL:78.2954:366.612,131.36:1.13848,1.13848:0.184507,0.538962,0.276614	0/0:20:0.99739:6,6:6-6,6-6:12,6,0,2:6,12:3,1|5,1:120.743:326.675,113.385:0.0,0.0:3.27621e-34,0.00136058,0.998642
+chr1	4365108	.	TCTTTCTTTCTT	.	.	.	END=4365119;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:35,23,0,0:3,35:NULL:349.875:366.612,131.36:0.0,0.0:0.0,2.82414e-10,1.0	0/0:36:1.0:3,3:3-3,3-3:20,13,0,3:3,20:2,3:223.14:326.675,113.385:0.0,0.0:0.0,5.17857e-06,0.999995
+chr1	4367608	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4367649;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:55:0.966374:21,24:20-22,24-24:23,17,0,13:20,2|21,6|22,3|23,3|24,9:6,3|9,1|12,1|16,1|18,1|19,3|20,2|21,1:391.52:366.612,131.36:0.456091,0.0990099:4.87875e-38,1.21687e-06,1.0	0/0:40:0.95915:21,21:11-21,11-21:14,8,0,16:20,3|21,11:10,1|12,1|13,1|14,1|16,2|17,2|19,5|20,3:271.685:326.675,113.385:4.35711,4.35711:1.72038e-11,0.0372044,0.962863
+chr1	4368385	.	CAAACAAACAAACAAA	.	.	.	END=4368400;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999479:4,4:4-4,4-4:14,19,0,2:4,14:3,2:242.427:366.612,131.36:0.0,0.0:0.0,0.000338708,0.999666	0/0:36:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:211.969:326.675,113.385:0.0,0.0:0.0,2.97353e-06,1.0
+chr1	4376870	.	AAATAAAATAAAATA	.	.	.	END=4376884;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999929:3,3:3-3,3-3:17,12,0,0:3,17:NULL:177.043:366.612,131.36:0.0,0.0:0.0,3.89198e-05,0.999963	0/0:16:0.930548:3,3:3-3,3-3:7,9,0,0:3,7:NULL:110.478:326.675,113.385:0.19802,0.19802:1.82652e-23,0.0449047,0.955169
+chr1	4380706	.	ATATACTATACATATACTATACATATACTATAC	ATATACTATAC	.	.	END=4380738;RU=atatactatac;PERIOD=11;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.685505:1,1:1-1,1-1:0,27,0,0:NULL:NULL:261.91:366.612,131.36:0.0,0.0:0.856769,0.140636,0.00268363	0/0:12:0.922507:3,3:3-3,3-3:7,5,0,0:3,7:NULL:74.7609:326.675,113.385:0.0,0.0:1.98248e-09,0.047239,0.952838
+chr1	4381338	.	CTTTCTTTCTTT	.	.	.	END=4381349;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99978:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.896:366.612,131.36:0.0,0.0:0.0,0.000123774,0.999879	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.07:326.675,113.385:0.0,0.0:0.0,8.56297e-08,1.0
+chr1	4383095	.	AAAATAAAATAAAATAAAAT	AAAAT	.	.	END=4383114;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0611241:1,1:1-4,1-4:0,7,0,0:NULL:NULL:62.4723:366.612,131.36:1.40706,1.40706:0.350436,0.489755,0.159858	0/0:22:0.999977:4,4:4-4,4-4:18,4,0,0:4,18:NULL:110.196:326.675,113.385:0.0,0.0:0.0,2.68047e-05,0.999972
+chr1	4388234	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=4388268;RU=ttttg;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999706:5,5:4-5,4-5:15,16,0,5:5,15:2,2|3,2|4,1:243.899:366.612,131.36:0.236383,0.236383:0.999948,5.32144e-05,3.0148e-41	0/0:31:0.99907:7,7:6-7,6-7:13,7,0,10:7,13:2,2|3,3|6,5:184.792:326.675,113.385:0.390807,0.390807:2.42909e-35,0.000341891,0.999659
+chr1	4389924	.	AAACAAACAAAC	.	.	.	END=4389935;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:20,18,0,0:3,20:NULL:238.624:366.612,131.36:0.0,0.0:0.0,3.72101e-06,1.0	0/0:26:0.999743:3,3:3-3,3-3:15,11,0,0:3,15:NULL:155.687:326.675,113.385:0.0,0.0:0.0,0.000163545,0.999841
+chr1	4390516	.	GAGAAGAGAGAAGAGAGAAGA	GAGAAGA	.	.	END=4390536;RU=gagaaga;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.112712:1,1:1-2,1-2:0,16,0,0:NULL:NULL:147.878:366.612,131.36:0.491073,0.491073:0.419702,0.473992,0.106424	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:223.091:326.675,113.385:0.0,0.0:0.0,1.10314e-07,1.0
+chr1	4391542	.	TAAATAAATAAA	.	.	.	END=4391553;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.996426:3,3:3-4,3-4:12,20,0,0:3,12:NULL:236.309:366.612,131.36:0.495841,0.495841:2.13451e-37,0.00220599,0.997799	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:223.19:326.675,113.385:0.0,0.0:0.0,5.08592e-07,1.0
+chr1	4391556	.	AACAACAACAAC	AACAACAACAACAAC	.	.	END=4391567;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.849097:5,5:4-5,4-5:17,19,0,0:4,3|5,14:NULL:257.578:366.612,131.36:0.486863,0.486863:0.0,7.64905e-05,0.999925	0/0:37:1.0:4,4:4-4,4-4:19,14,0,4:4,19:3,4:235.756:326.675,113.385:0.0,0.0:0.0,6.8877e-06,0.999994
+chr1	4394196	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=4394211;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999904:5,5:5-5,5-5:16,11,0,3:5,16:3,1|4,2:192.136:366.612,131.36:0.0,0.0:0.0,2.63456e-05,0.999978	0/0:30:1.00001:4,4:4-4,4-4:20,7,0,3:4,20:2,1|3,2:171.045:326.675,113.385:0.0,0.0:0.0,3.13178e-06,1.0
+chr1	4399750	.	GAACAGAACAGAACA	.	.	.	END=4399764;RU=gaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,16,0,0:3,23:NULL:241.427:366.612,131.36:0.0,0.0:0.0,1.09336e-06,1.0	0/0:28:0.999941:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.316:326.675,113.385:0.0,0.0:0.0,5.14948e-05,0.999949
+chr1	4404415	.	ACCACCACCACCACC	.	.	.	END=4404429;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:22,17,0,4:5,22:3,1|4,3:280.212:366.612,131.36:0.0,0.0:0.0,2.68116e-07,1.0	0/0:35:1.00001:5,5:5-5,5-5:22,11,0,2:5,22:3,1|4,1:204.569:326.675,113.385:0.0,0.0:0.0,1.20117e-06,1.0
+chr1	4413710	.	ATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATAC	.	.	.	END=4413789;RU=atagatac;PERIOD=8;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.166102:10,10:5-10,5-10:2,12,0,8:10,2:2,1|4,4|6,1|7,1|8,1:170.496:366.612,131.36:1.1234,1.1234:5.66557e-06,0.721365,0.27863	0/0:31:0.93962:10,10:10-10,10-10:7,8,0,16:10,7:2,1|3,2|4,1|5,2|6,2|7,4|8,3|9,1:209.782:326.675,113.385:0.0,0.0:9.99768e-20,0.0315962,0.968463
+chr1	4416214	.	AGACAGACAGAC	.	.	.	END=4416225;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.042:366.612,131.36:0.0,0.0:0.0,4.45306e-06,0.999995	0/0:44:1.00001:3,3:3-3,3-3:20,21,0,3:3,20:2,3:296.935:326.675,113.385:0.0,0.0:0.0,2.77719e-06,1.0
+chr1	4417332	.	CATGCATGCATG	.	.	.	END=4417343;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:217.251:366.612,131.36:0.0,0.0:0.0,7.47455e-06,0.999994	0/0:26:0.999984:3,3:3-3,3-3:18,8,0,0:3,18:NULL:147.202:326.675,113.385:0.0,0.0:0.0,2.16373e-05,0.999979
+chr1	4423050	.	TAATTTAATTTAATT	.	.	.	END=4423064;RU=taatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.996592:3,3:3-3,3-3:11,10,0,0:3,11:NULL:135.921:366.612,131.36:0.0,0.0:4.76551e-36,0.00230319,0.997701	0/0:14:0.981437:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.535:326.675,113.385:0.0,0.0:2.28684e-29,0.00902879,0.990993
+chr1	4423239	.	CACACACACACA	CACACACACACACA	.	.	END=4423250;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999994:7,7:7-7,7-7:19,11,0,0:7,19:NULL:174.886:366.612,131.36:0.0,0.0:0.0,8.04436e-06,0.999994	0/0:29:1.00001:6,6:6-6,6-6:23,2,0,4:6,23:5,4:138.927:326.675,113.385:0.0,0.0:0.0,3.36608e-07,1.0
+chr1	4425083	.	CCACCACCACCACCACCA	CCA	.	.	END=4425100;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.108716:1,1:1-1,1-1:0,27,0,0:NULL:NULL:244.089:366.612,131.36:0.139319,0.139319:0.66748,0.30592,0.0266397	0/0:55:1.0:6,6:6-6,6-6:29,20,0,5:6,29:5,5:334.155:326.675,113.385:0.0,0.0:0.0,6.39426e-09,1.0
+chr1	4426093	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4426130;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.271415:27,30:27-28,27-32:3,14,0,12:27,3:7,2|8,1|9,1|10,1|14,1|16,1|17,1|23,1|26,2|29,1:245.354:366.612,131.36:0.537761,1.20589:0.0,0.0,1.0	0/3:37:0.283368:19,34:19-19,19-34:15,9,0,10:18,3|19,12:8,1|12,1|13,1|15,1|16,1|18,3|19,1|32,1:249.377:326.675,113.385:0.0,6.86953:1.57146e-22,1.97878e-05,0.99998
+chr1	4426860	.	AAACAAACAAAC	.	.	.	END=4426871;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999805:3,3:3-3,3-3:15,17,0,0:3,15:NULL:216.953:366.612,131.36:0.0,0.0:0.0,8.43516e-05,0.999918	0/0:22:0.999963:3,3:3-3,3-3:17,5,0,0:3,17:NULL:118.047:326.675,113.385:0.0,0.0:0.0,3.00444e-05,0.999971
+chr1	4429409	.	CCACCACCACCA	.	.	.	END=4429420;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:30,17,0,0:4,30:NULL:267.832:366.612,131.36:0.0,0.0:0.0,8.387e-09,1.0	0/0:42:1.0:4,4:4-4,4-4:29,12,0,0:4,29:NULL:225.644:326.675,113.385:0.139319,0.139319:0.0,2.04925e-08,1.0
+chr1	4429719	.	GTGTGTGTGTGT	GTGTGTGT	.	.	END=4429730;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.990269:4,4:4-6,4-6:11,18,0,0:4,11:NULL:206.913:366.612,131.36:0.863148,0.863148:0.997246,0.00275907,6.92527e-21	0/0:25:0.999978:6,6:6-6,6-6:19,6,0,0:6,19:NULL:131.122:326.675,113.385:0.0,0.0:6.31465e-34,1.52283e-05,0.999986
+chr1	4429733	.	GAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=4429752;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.979729:8,8:8-8,8-8:10,13,0,0:8,10:NULL:160.169:366.612,131.36:0.139319,0.139319:0.99593,0.00407977,1.80434e-17	0/0:32:0.955031:10,10:10-11,10-11:21,8,0,3:10,18|11,3:5,1|8,1|9,1:192.258:326.675,113.385:0.412766,0.412766:3.22241e-26,5.15855e-06,0.999995
+chr1	4430764	.	ATGAATGAATGAATGAATGAATGAATGAATGA	ATGAATGAATGAATGAATGAATGAATGAATGAATGA	.	.	END=4430795;RU=atga;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999375:9,9:9-9,9-9:14,15,0,11:9,14:2,1|3,1|4,1|5,2|6,1|7,1|8,4:274.613:366.612,131.36:0.0,0.0:0.0,2.02402e-05,0.99998	0/0:31:1.0:8,8:8-8,8-8:19,6,0,6:8,19:2,1|3,1|7,4:179.494:326.675,113.385:0.0,0.0:0.0,4.54047e-06,0.999995
+chr1	4434303	.	TATATATATATA	TATATATATATATATATA,TATATATATATATATATATATATA	.	.	END=4434314;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.974761:9,12:9-13,12-12:12,13,0,0:9,2|12,10:NULL:177.35:366.612,131.36:1.49377,0.0:0.0,0.0,1.0	0/0:25:0.916793:6,6:5-7,5-7:7,14,0,2:6,7:5,2:175.812:326.675,113.385:0.531343,0.531343:4.91889e-09,0.0459664,0.954107
+chr1	4435269	.	CAATCAATCAAT	.	.	.	END=4435280;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:228.273:366.612,131.36:0.0,0.0:0.0,4.80746e-07,1.0	0/0:32:0.999981:3,3:3-3,3-3:18,12,0,2:3,18:2,2:189.296:326.675,113.385:0.0,0.0:0.0,1.38634e-05,0.999987
+chr1	4448845	.	CTGCCTGCCTGC	.	.	.	END=4448856;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999965:3,3:3-3,3-3:17,22,0,4:3,17:2,4:297.44:366.612,131.36:0.0,0.0:0.0,1.88329e-05,0.999985	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:162.143:326.675,113.385:0.0,0.0:0.0,1.34186e-06,1.0
+chr1	4449017	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4449072;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:51:0.914811:15,16:15-15,15-16:10,21,0,20:15,8|16,2:2,2|3,1|4,1|5,2|7,2|9,2|10,1|12,3|13,2|14,3|15,1:398.823:366.612,131.36:0.0,0.491073:0.0,4.19426e-05,0.999957	0/0:47:0.968477:14,14:11-15,11-15:8,18,0,19:14,8:2,1|3,3|4,1|6,3|7,1|8,2|9,2|10,1|12,2|13,3:341.121:326.675,113.385:1.35177,1.35177:1.51877e-16,0.0150207,0.985009
+chr1	4450115	.	ATATATATATAT	ATATATATAT	.	.	END=4450126;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:21:1.0:5,6:4-5,5-7:11,8,0,0:5,5|6,6:NULL:122.639:366.612,131.36:0.342408,0.372309:1.28879e-08,1.0,4.9555e-08	0/0:31:0.997716:6,6:5-6,5-6:13,17,0,0:6,13:NULL:201.31:326.675,113.385:0.334882,0.334882:6.22094e-24,0.00170779,0.998299
+chr1	4451210	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4451261;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:46:0.632992:22,26:22-28,26-28:15,11,0,19:21,2|22,4|24,3|26,6:6,1|8,1|9,1|11,1|12,2|14,1|18,2|19,1|20,1|21,3|22,3|23,1|28,1:360.671:366.612,131.36:2.73257,1.06305:6.07213e-07,0.865972,0.134122	0/2:45:0.887578:26,27:11-27,11-27:10,11,0,22:25,3|26,4|27,3:5,3|6,1|7,1|8,1|9,2|14,1|16,1|19,3|20,2|22,2|23,2|24,3:331.719:326.675,113.385:5.24564,6.06172:5.90559e-07,0.101421,0.898681
+chr1	4451385	.	TTGTTTTGTTTTGTT	.	.	.	END=4451399;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:21,31,0,0:3,21:NULL:354.695:366.612,131.36:0.0,0.0:0.0,5.06123e-06,0.999995	0/0:35:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.192:326.675,113.385:0.0,0.0:0.0,1.28186e-05,0.999987
+chr1	4451409	.	TCTGTCTGTCTG	.	.	.	END=4451420;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,27,0,0:3,29:NULL:353.468:366.612,131.36:0.0,0.0:0.0,2.236e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:233.131:326.675,113.385:0.0,0.0:0.0,1.73914e-07,1.0
+chr1	4453062	.	GGAGGGAGGGAG	.	.	.	END=4453073;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.998932:3,3:3-3,3-3:14,24,0,0:3,14:NULL:276.614:366.612,131.36:0.0,0.0:0.0,0.000780357,0.999225	0/0:36:1.00001:3,3:3-3,3-3:21,13,0,2:3,21:2,2:214.931:326.675,113.385:0.0,0.0:0.0,1.49998e-06,1.0
+chr1	4454884	.	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	.	.	END=4454995;RU=cctgctg;PERIOD=7;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:54:0.777954:6,16:6-13,12-16:6,24,0,18:6,2|10,2|14,2:2,1|3,2|5,4|6,1|7,1|8,1|10,1|11,1|12,3|13,1|16,2:417.147:366.612,131.36:1.93807,1.59992:3.3098e-10,1.0,1.04847e-27	2/3:59:0.999114:14,19:10-16,3-21:10,21,1,24:10,3|14,3|16,4:2,2|3,3|4,1|5,1|6,1|9,1|11,2|12,2|13,1|14,5|15,4|16,1:535.961:326.675,113.385:2.21278,4.46079:0.0,1.0,2.26331e-06
+chr1	4461472	.	GAAGGGAAGGGAAGGGAAGG	GAAGG	.	.	END=4461491;RU=gaagg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.00377504:1,1:1-5,1-5:0,3,0,0:NULL:NULL:26.5218:366.612,131.36:0.780108,0.780108:0.0267453,0.388297,0.585074	0/0:40:1.0:4,4:4-4,4-4:24,13,0,3:4,24:3,3:239.676:326.675,113.385:0.0,0.0:0.0,2.98127e-07,1.0
+chr1	4462221	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4462246;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0549007:24,24:24-26,24-26:0,11,0,8:NULL:4,1|5,1|10,1|13,1|15,1|20,1|24,2:161.879:366.612,131.36:0.592738,0.592738:0.0,0.0,1.0	0/0:47:0.646146:13,13:13-17,13-17:27,12,0,8:12,2|13,23|14,2:8,1|9,2|10,2|11,1|12,1|17,1:311.76:326.675,113.385:1.82404,1.82404:2.00885e-34,2.38216e-06,1.0
+chr1	4467043	.	ATAAATAAATAA	.	.	.	END=4467054;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999958:3,3:3-3,3-3:17,21,0,2:3,17:2,2:278.905:366.612,131.36:0.0,0.0:0.0,3.44744e-05,0.999965	0/0:35:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.454:326.675,113.385:0.0,0.0:0.0,1.14046e-05,0.999988
+chr1	4467845	.	TTGTTTGTTTGTTTGT	.	.	.	END=4467860;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.953266:4,4:4-4,4-4:7,10,0,4:4,7:3,4:149.755:366.612,131.36:0.0,0.0:5.79576e-24,0.019206,0.980836	0/0:32:0.99997:4,4:4-4,4-4:18,14,0,0:4,18:NULL:199.375:326.675,113.385:0.0,0.0:0.0,3.81478e-05,0.999964
+chr1	4468187	.	ATCATCATCATC	.	.	.	END=4468198;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:23,11,0,2:4,23:3,2:207.549:366.612,131.36:0.0,0.0:0.0,5.2263e-07,1.0	0/0:37:1.00001:4,4:4-4,4-4:22,15,0,0:4,22:NULL:227.915:326.675,113.385:0.0,0.0:0.0,3.11186e-06,1.0
+chr1	4469245	.	CACACACACACACACACA	.	.	.	END=4469262;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:9,9:9-9,9-9:26,11,0,3:9,26:7,1|8,2:236.579:366.612,131.36:0.19802,0.19802:4.37e-43,1.08494e-07,1.0	0/0:47:1.00001:9,9:9-9,9-9:21,20,0,5:9,21:5,1|6,1|8,3:310.661:326.675,113.385:0.0,0.0:3.32615e-35,1.90036e-06,1.0
+chr1	4471019	.	AGCCAGCCAGCC	.	.	.	END=4471030;RU=agcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,12,0,2:3,20:2,2:201.95:366.612,131.36:0.0,0.0:0.0,2.25541e-06,1.0	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:224.631:326.675,113.385:0.0,0.0:0.0,6.74975e-07,1.0
+chr1	4472443	.	TGTGTGTGTGTGTG	.	.	.	END=4472456;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999899:7,7:7-7,7-7:17,14,0,0:7,17:NULL:202.743:366.612,131.36:0.0,0.0:5.0226e-40,6.89604e-05,0.999933	0/0:38:1.0:7,7:7-7,7-7:23,11,0,4:7,23:5,2|6,2:226.914:326.675,113.385:0.0,0.0:0.0,3.91387e-07,1.0
+chr1	4473588	.	TTTGTTTGTTTG	.	.	.	END=4473599;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:267.43:366.612,131.36:0.0,0.0:0.0,8.19186e-09,1.0	0/0:45:1.0:3,3:3-3,3-3:29,13,0,3:3,29:2,3:253.947:326.675,113.385:0.0,0.0:0.0,6.24976e-09,1.0
+chr1	4475372	.	GTTGGTTGGTTG	.	.	.	END=4475383;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:0.999993:3,3:3-3,3-3:19,31,0,0:3,19:NULL:352.768:366.612,131.36:0.0,0.0:0.0,1.81628e-05,0.999985	0/0:58:1.0:3,3:3-3,3-3:24,32,0,2:3,24:2,2:399.093:326.675,113.385:0.0,0.0:0.0,6.3523e-07,1.0
+chr1	4475462	.	TGGTTGGTTGGT	.	.	.	END=4475473;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999904:3,3:3-3,3-3:17,28,0,0:3,17:NULL:328.445:366.612,131.36:0.0,0.0:0.0,9.22666e-05,0.99991	0/0:44:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:294.213:326.675,113.385:0.0,0.0:0.0,5.04333e-06,0.999995
+chr1	4476345	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	END=4476384;RU=ggaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999495:9,9:9-9,9-9:14,12,0,4:9,14:3,1|8,3:203.82:366.612,131.36:0.0,0.0:0.999667,0.000333038,6.32498e-26	0/0:31:0.996083:10,10:10-10,10-10:11,10,0,10:10,11:2,1|5,1|7,2|9,6:209.801:326.675,113.385:0.0,0.0:2.03327e-31,0.0011957,0.998808
+chr1	4476816	.	CCCTCCCTCCCTCCCT	CCCTCCCTCCCT	.	.	END=4476831;RU=ccct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.153545:3,3:2-4,2-4:0,21,0,3:NULL:3,3:212.852:366.612,131.36:0.46881,0.46881:0.281163,0.517279,0.201561	0/0:23:0.966917:4,4:4-4,4-4:9,14,0,0:4,9:NULL:168.071:326.675,113.385:0.0,0.0:6.6534e-14,0.0255635,0.974488
+chr1	4477626	.	TAAATAAATAAA	.	.	.	END=4477637;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:27,20,0,0:3,27:NULL:295.899:366.612,131.36:0.0,0.0:0.0,9.2065e-08,1.0	0/0:38:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:197.046:326.675,113.385:0.0,0.0:0.0,1.8844e-08,1.0
+chr1	4490091	.	AACAACAACAACAACAACAAC	.	.	.	END=4490111;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99516:7,7:7-7,7-7:11,8,0,3:7,11:3,1|4,1|6,1:138.756:366.612,131.36:0.0,0.0:4.41312e-30,0.00219522,0.997813	0/0:25:0.999329:7,7:7-7,7-7:14,8,0,3:7,14:4,1|5,1|6,1:155.084:326.675,113.385:0.0,0.0:4.45758e-38,0.000267166,0.999735
+chr1	4491987	.	TGCTGCTGCTGC	.	.	.	END=4491998;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999887:4,4:4-4,4-4:17,20,0,0:4,17:NULL:250.469:366.612,131.36:0.0,0.0:0.0,8.49653e-05,0.999917	0/0:29:0.999976:4,4:4-4,4-4:18,11,0,0:4,18:NULL:174.657:326.675,113.385:0.0,0.0:0.0,3.28594e-05,0.99997
+chr1	4500015	.	ATAATAATAATA	.	.	.	END=4500026;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:27,28,0,0:4,27:NULL:370.374:366.612,131.36:0.0,0.0:0.0,1.39988e-07,1.0	0/0:38:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:226.75:326.675,113.385:0.0,0.0:0.0,2.00146e-06,1.0
+chr1	4500558	.	ACATACATACAT	.	.	.	END=4500569;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:264.928:366.612,131.36:0.0990099,0.0990099:0.0,4.35992e-10,1.0	0/0:25:0.99975:3,3:3-3,3-3:15,10,0,0:3,15:NULL:153.146:326.675,113.385:0.0,0.0:3.50738e-38,0.000171094,0.999833
+chr1	4500614	.	AATAAATAAATA	.	.	.	END=4500625;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999964:3,3:3-3,3-3:18,11,0,0:3,18:NULL:177.338:366.612,131.36:0.0,0.0:0.0,3.26547e-05,0.999971	0/0:25:0.999519:3,3:3-3,3-3:14,11,0,0:3,14:NULL:157.545:326.675,113.385:0.0,0.0:1.93e-43,0.000309201,0.999691
+chr1	4501653	.	GTAGTAGTAGTAGTA	.	.	.	END=4501667;RU=gta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:5-5,5-5:21,11,0,0:5,21:NULL:187.389:366.612,131.36:0.0,0.0:0.0,3.62527e-06,1.0	0/0:32:0.999994:5,5:4-5,4-5:19,10,0,2:5,19:4,2:184.127:326.675,113.385:0.195027,0.195027:0.0,1.32039e-05,0.999987
+chr1	4509810	.	TGTGTGTGTGTG	.	.	.	END=4509821;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.00001:6,6:6-8,6-8:42,19,0,2:6,42:5,1|7,1:373.597:366.612,131.36:0.598989,0.598989:0.0,1.67446e-12,1.0	0/0:117:1.0:6,6:6-9,6-9:100,11,0,2:4,2|6,96|7,2:5,1|7,1:542.75:326.675,113.385:0.771007,0.771007:0.0,3.3599e-26,1.0
+chr1	4510185	.	TATTTATTTATT	.	.	.	END=4510196;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:221.005:366.612,131.36:0.0,0.0:0.0,6.7528e-07,1.0	0/0:36:0.999994:3,3:3-3,3-3:19,17,0,0:3,19:NULL:222.763:326.675,113.385:0.0,0.0:0.0,1.3827e-05,0.999987
+chr1	4510496	.	GAAGAAGAAGAAGAAGAA	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=4510513;RU=gaa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0382175:14,14:13-17,13-17:0,8,0,5:NULL:8,1|10,1|11,1|14,2:113.132:366.612,131.36:1.00025,1.00025:0.0,0.0,1.0	0/0:29:1.0:6,6:6-6,6-6:20,9,0,0:6,20:NULL:161.976:326.675,113.385:0.0,0.0:0.0,8.88947e-06,0.999994
+chr1	4510513	.	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	.	.	END=4510542;RU=agg;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0515067:12,12:12-15,12-15:0,6,0,7:NULL:4,2|7,2|10,1|11,1|12,1:110.798:366.612,131.36:1.40594,1.40594:0.0,0.0,1.0	0/0:30:0.99965:10,10:10-10,10-10:15,10,0,5:10,15:4,1|6,3|8,1:189.774:326.675,113.385:0.0,0.0:4e-45,0.000222649,0.999781
+chr1	4512324	.	AACAAAACAAAACAA	.	.	.	END=4512338;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998922:3,3:3-4,3-4:14,18,0,3:3,14:2,3:242.475:366.612,131.36:0.452422,0.452422:1e-45,0.000483448,0.999521	0/0:28:0.998154:3,3:3-4,3-4:12,13,0,2:3,12:2,2:178.278:326.675,113.385:0.484441,0.484441:1.24142e-39,0.00100998,0.998991
+chr1	4514924	.	TTGGTTGGTTGG	.	.	.	END=4514935;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999946:3,3:3-3,3-3:16,21,0,4:3,16:2,3|3,1:284.082:366.612,131.36:0.0,0.0:0.0,1.97494e-05,0.99998	0/0:37:1.0:3,3:3-3,3-3:27,8,0,2:3,27:2,2:196.928:326.675,113.385:0.0,0.0:0.0,2.16884e-08,1.0
+chr1	4515460	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4515507;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.684135:26,27:25-26,24-27:10,15,0,11:25,2|26,6|27,2:6,1|7,1|8,1|11,1|14,2|16,2|18,1|21,2:281.402:366.612,131.36:0.363246,0.786989:1.3169e-16,0.00404163,0.995968	0/0:33:0.584003:24,24:16-24,16-24:14,7,0,10:23,5|24,9:9,1|11,2|14,3|18,1|19,1|21,1|22,1:216.042:326.675,113.385:3.21674,3.21674:6.79599e-08,0.413248,0.586829
+chr1	4515925	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4515960;RU=gttt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:1.00001:7,7:5-7,5-7:20,18,0,8:7,20:2,1|4,1|6,6:306.672:366.612,131.36:0.339533,0.339533:1.0,2.28116e-06,0.0	0/0:62:1.0:9,9:9-9,9-9:28,19,0,15:9,28:3,2|5,1|6,2|8,10:398.289:326.675,113.385:0.0,0.0:0.0,1.04606e-08,1.0
+chr1	4517194	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	END=4517241;RU=aata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.99183:11,11:11-11,11-11:11,12,0,10:11,11:3,2|4,1|5,1|6,2|7,2|8,2:228.232:366.612,131.36:0.0,0.0:0.997852,0.00215301,3.01162e-19	0/0:29:0.947807:12,12:12-12,12-12:7,12,0,10:12,7:3,1|4,1|5,1|6,2|11,5:206.508:326.675,113.385:0.0,0.0:4.58471e-16,0.0210618,0.978979
+chr1	4517464	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4517491;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.989754:19,19:19-23,19-23:15,14,0,13:18,2|19,13:5,1|6,1|8,1|10,3|12,1|13,2|15,3|16,1:305.876:366.612,131.36:1.53858,1.53858:0.0,0.0,1.0	0/0:37:0.846884:14,14:13-15,13-15:16,7,0,13:13,2|14,12|15,2:6,1|7,1|8,3|9,3|10,3|11,1|13,1:242.078:326.675,113.385:0.495247,0.495247:3.39869e-16,0.00271662,0.997291
+chr1	4519236	.	TTTTGTTTTGTTTTG	.	.	.	END=4519250;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999986:3,3:3-3,3-3:18,23,0,0:3,18:NULL:280.201:366.612,131.36:0.0,0.0:0.0,2.30958e-05,0.999979	0/0:35:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:223.843:326.675,113.385:0.0,0.0:0.0,2.45399e-05,0.999978
+chr1	4522379	.	TTTGTTTGTTTG	.	.	.	END=4522390;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.447837:3,3:1-3,1-3:3,11,0,0:3,3:NULL:106.851:366.612,131.36:0.339533,0.339533:1.14479e-10,0.29444,0.705567	0/0:22:0.995174:3,3:3-3,3-3:11,11,0,0:3,11:NULL:142.451:326.675,113.385:0.0,0.0:1.64583e-36,0.00271403,0.997292
+chr1	4527121	.	TATATATATATATATATA	.	.	.	END=4527138;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.236118:9,9:9-9,9-9:2,0,0,0:9,2:NULL:8.24721:366.612,131.36:0.0,0.0:0.000905115,0.37211,0.627037	0/0:5:0.278082:9,9:5-9,5-9:3,1,0,0:9,3:NULL:22.0666:326.675,113.385:1.79052,1.79052:5.24669e-05,0.502426,0.497538
+chr1	4527198	.	ATATATATATATATATATAT	AT	.	.	END=4527217;RU=at;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:8:0.33062:10,10:9-11,9-11:3,3,0,0:10,3:NULL:39.0087:326.675,113.385:0.741055,0.741055:5.23093e-05,0.359284,0.640709
+chr1	4528748	.	CACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=4528795;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:55:0.99964:16,16:11-16,11-16:17,20,0,17:16,17:5,1|7,2|8,3|9,1|10,2|11,2|12,3|14,1|15,2:388.295:366.612,131.36:0.848833,0.848833:1.0,0.0,0.0	0/0:33:0.9829:24,24:24-24,24-24:10,9,0,13:24,10:5,1|7,1|8,1|9,1|16,2|18,1|19,1|21,1|23,4:237.715:326.675,113.385:0.0990099,0.0990099:5.91749e-13,0.0046174,0.995394
+chr1	4529762	.	GGGTGGGTGGGT	.	.	.	END=4529773;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.870944:3,3:3-3,3-3:6,5,0,0:3,6:NULL:67.1805:366.612,131.36:0.0,0.0:2.05362e-17,0.0642545,0.935837	0/0:20:0.865018:3,3:3-3,3-3:6,14,0,0:3,6:NULL:151.244:326.675,113.385:0.19802,0.19802:2.29599e-17,0.0763372,0.92376
+chr1	4530947	.	GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	GAGG,GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	.	.	END=4531030;RU=gagg;PERIOD=4;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	2/2:3:0.0358677:9,9:7-9,7-9:0,0,0,3:NULL:7,1|8,1|9,1:21.8276:326.675,113.385:0.540307,0.540307:1.0,0.0,0.0
+chr1	4533708	.	AAACAAACAAAC	AAAC	.	.	END=4533719;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.999983:3,3:3-3,3-3:18,8,0,0:3,18:NULL:148.323:326.675,113.385:0.0,0.0:0.0,2.30936e-05,0.999979
+chr1	4536587	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4536616;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.479008:25,25:23-29,23-29:7,5,0,14:24,2|25,5:6,2|7,3|8,2|10,1|13,1|14,1|19,2|22,1|23,1:190.956:366.612,131.36:2.46314,2.46314:0.0,0.0,1.0	0/0:45:0.99191:15,15:14-16,14-16:22,15,0,8:13,2|14,2|15,16|16,2:5,1|7,2|9,1|11,2|13,1|14,1:313.078:326.675,113.385:0.409188,0.409188:8.50151e-21,0.00223313,0.997775
+chr1	4537486	.	CCCACCCACCCA	.	.	.	END=4537497;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,12,0,0:3,30:NULL:228.608:366.612,131.36:0.0,0.0:0.0,5.14401e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:28,6,0,0:3,28:NULL:165.859:326.675,113.385:0.0,0.0:0.0,1.44741e-08,1.0
+chr1	4539497	.	AAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4539516;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.999962:5,5:4-5,4-5:18,17,0,2:5,18:2,1|3,1:242.545:366.612,131.36:0.195027,0.195027:0.0,3.80167e-05,0.999964	0/0:33:1.00001:4,4:4-4,4-4:21,8,0,4:4,21:2,1|3,3:181.496:326.675,113.385:0.0,0.0:0.0,1.42155e-06,1.0
+chr1	4540447	.	TTTATTTTATTTTAT	.	.	.	END=4540461;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.578:366.612,131.36:0.0,0.0:0.0,3.02473e-06,1.0	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:142.828:326.675,113.385:0.0,0.0:0.0,5.00032e-06,0.999995
+chr1	4542382	.	AAGAAAGAAAGA	.	.	.	END=4542393;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:142.975:366.612,131.36:0.0,0.0:0.0,1.05021e-06,1.0	0/0:16:0.995299:3,3:3-3,3-3:11,5,0,0:3,11:NULL:86.14:326.675,113.385:0.0,0.0:1.94761e-37,0.00231251,0.997693
+chr1	4543194	.	TTATTATTATTA	.	.	.	END=4543205;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999995:4,4:4-4,4-4:20,13,0,0:4,20:NULL:200.318:366.612,131.36:0.0,0.0:0.0,1.19973e-05,0.999987	0/0:24:0.999571:4,4:4-4,4-4:15,9,0,0:4,15:NULL:145.931:326.675,113.385:0.0,0.0:3.91876e-40,0.000276912,0.999727
+chr1	4544564	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4544591;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.99878:6,6:6-6,6-6:13,19,0,2:6,13:3,1|4,1:244.016:366.612,131.36:0.0,0.0:0.999628,0.000375309,2.56771e-31	0/0:24:0.994105:7,7:7-7,7-7:11,10,0,3:7,11:3,2|6,1:159.312:326.675,113.385:0.0,0.0:7.66103e-37,0.00394,0.996072
+chr1	4545765	.	ACACACACACAC	ACACACACACACACAC	.	.	END=4545776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:1.00001:8,8:8-8,8-8:20,26,0,7:8,20:5,1|6,2|7,4:381.986:366.612,131.36:0.0,0.0:0.0,7.87563e-08,1.0	0/0:54:1.0:6,6:6-6,6-6:33,18,0,3:6,33:4,1|5,2:325.214:326.675,113.385:0.0,0.0:0.0,4.0991e-10,1.0
+chr1	4547787	.	AGGAGGAGGAGG	.	.	.	END=4547798;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:28,18,0,0:4,28:NULL:285.577:366.612,131.36:0.0,0.0:0.0,7.32086e-08,1.0	0/0:37:1.0:4,4:4-4,4-4:28,9,0,0:4,28:NULL:190.861:326.675,113.385:0.0,0.0:0.0,3.96374e-08,1.0
+chr1	4556934	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT	.	.	END=4556979;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:34:0.833758:23,23:21-23,21-23:7,12,0,13:23,7:5,1|6,1|7,1|9,2|10,1|11,1|12,1|13,1|15,1|19,1|20,1|22,1:246.824:326.675,113.385:0.673849,0.673849:9.5259e-08,0.0841745,0.915921
+chr1	4566916	.	GGGTGGGTGGGT	.	.	.	END=4566927;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.567369:3,3:2-3,2-3:4,8,0,0:3,4:NULL:85.089:366.612,131.36:0.48221,0.48221:3.09765e-11,0.190045,0.810013	0/0:33:0.760216:3,3:3-3,3-3:5,28,0,0:3,5:NULL:259.804:326.675,113.385:0.0,0.0:1.50785e-13,0.153551,0.846528
+chr1	4567644	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4567655;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0338735:22,22:19-22,19-22:0,0,0,12:NULL:4,1|6,2|7,1|9,1|14,1|16,1|18,1|19,3|22,1:95.6448:366.612,131.36:1.4827,1.4827:0.0,0.000460747,0.999544	0/0:28:0.999936:6,6:6-6,6-6:17,8,0,3:6,17:4,1|5,2:171.094:326.675,113.385:0.0,0.0:1.44138e-40,3.13488e-05,0.999971
+chr1	4569841	.	TTGTTTGTTTGT	TTGTTTGTTTGTTTGT	.	.	END=4569852;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.00001:4,4:4-4,4-4:22,17,0,3:4,22:3,3:260.7:366.612,131.36:0.0,0.0:0.0,3.04953e-07,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:191.967:326.675,113.385:0.0,0.0:0.0,5.36049e-07,1.0
+chr1	4571456	.	AAACAAACAAAC	.	.	.	END=4571467;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999049:3,3:2-3,2-3:13,20,0,2:3,13:2,2:245.581:366.612,131.36:0.469019,0.469019:5.38e-43,0.000642941,0.999362	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:240.533:326.675,113.385:0.0,0.0:0.0,9.15509e-08,1.0
+chr1	4578817	.	ATTGCATTGCATTGC	.	.	.	END=4578831;RU=attgc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:22,16,0,0:3,22:NULL:233.183:366.612,131.36:0.0,0.0:0.0,1.90477e-06,1.0	0/0:36:1.0:3,3:2-3,2-3:23,10,0,2:3,23:2,2:194.365:326.675,113.385:0.323567,0.323567:0.0,5.35587e-07,1.0
+chr1	4579277	.	ACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=4579306;RU=ac;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:43:0.939866:18,19:18-19,19-19:9,17,0,17:18,4|19,5:4,1|7,1|8,2|9,3|11,1|12,1|13,3|14,3|15,1|18,1:339.652:366.612,131.36:0.442564,0.139319:0.0,0.0,1.0	0/0:42:0.980888:15,15:14-16,14-16:19,14,0,9:14,3|15,14|16,2:5,1|6,1|7,2|9,1|12,1|14,3:302.927:326.675,113.385:0.441011,0.441011:1.26407e-17,0.00565926,0.994354
+chr1	4580702	.	ATTTATTTATTT	ATTT	.	.	END=4580713;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.125985:1,1:1-2,1-2:0,24,0,0:NULL:NULL:234.882:366.612,131.36:0.499779,0.499779:0.445043,0.463997,0.0911081	0/0:37:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.636:326.675,113.385:0.139319,0.139319:0.0,1.64117e-07,1.0
+chr1	4581133	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4581176;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.297711:29,38:28-29,23-39:7,14,0,12:28,3|29,4:4,1|7,1|9,1|16,1|18,3|19,2|23,1|29,1|37,1:263.144:366.612,131.36:0.695188,6.28375:0.0,6.17484e-08,1.0	0/0:40:0.480372:22,22:21-22,21-22:8,13,0,19:21,3|22,5:5,3|7,1|8,1|9,1|11,1|12,1|13,4|15,1|16,1|18,1|20,2|21,1|22,1:307.642:326.675,113.385:0.492866,0.492866:1.39042e-12,0.48673,0.513336
+chr1	4581630	.	AATTAATTAATT	.	.	.	END=4581641;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:187.918:366.612,131.36:0.0,0.0:0.0,3.38291e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.98:326.675,113.385:0.0,0.0:0.0,6.67178e-07,1.0
+chr1	4599798	.	TTTGTTTTGTTTTGT	.	.	.	END=4599812;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:0.999999:3,3:3-3,3-3:20,35,0,0:3,20:NULL:397.608:366.612,131.36:0.0,0.0:0.0,1.02541e-05,0.999993	0/0:36:0.999927:3,3:3-3,3-3:17,19,0,0:3,17:NULL:237.147:326.675,113.385:0.0,0.0:0.0,6.69849e-05,0.999934
+chr1	4602828	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=4602885;RU=ct;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.0249419:24,28:7-29,13-29:0,14,0,8:NULL:9,1|11,2|13,2|16,1|24,1|28,1:190.043:366.612,131.36:6.72884,4.25337:0.29436,0.659006,0.0467059	0/0:22:0.585198:29,29:28-30,28-30:7,10,0,4:28,2|29,5:4,1|5,1|8,1|15,1:162.432:326.675,113.385:0.659736,0.659736:1.82059e-05,0.345316,0.654699
+chr1	4603083	.	CCTCCCCTCCCCTCC	.	.	.	END=4603097;RU=cctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.99967:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.501:366.612,131.36:0.0,0.0:0.0,0.000205378,0.999796	0/0:32:0.999994:3,3:3-3,3-3:19,13,0,0:3,19:NULL:188.353:326.675,113.385:0.0,0.0:0.0,1.20483e-05,0.999987
+chr1	4608057	.	GGGTGGGTGGGT	.	.	.	END=4608068;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.880045:3,3:3-3,3-3:6,17,0,0:3,6:NULL:173.037:366.612,131.36:0.0,0.0:1.75633e-18,0.0713738,0.92872	0/0:30:0.996315:3,3:3-3,3-3:11,19,0,0:3,11:NULL:212.434:326.675,113.385:0.0,0.0:8.84134e-33,0.00266666,0.997343
+chr1	4612833	.	TATTTATTTATT	.	.	.	END=4612844;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999731:3,3:3-3,3-3:15,19,0,0:3,15:NULL:237.486:366.612,131.36:0.0,0.0:0.0,0.000187178,0.999812	0/0:30:0.999638:3,3:3-3,3-3:14,14,0,2:3,14:2,2:198.623:326.675,113.385:0.0,0.0:0.0,0.000219158,0.999781
+chr1	4613348	.	AAATAAATAAATAAAT	.	.	.	END=4613363;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:25,18,0,3:4,25:2,1|3,2:288.879:366.612,131.36:0.0,0.0:0.0,1.33209e-07,1.0	0/0:40:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:250.85:326.675,113.385:0.0,0.0:0.0,2.46058e-06,1.0
+chr1	4618031	.	CTCTCTCTCTCT	.	.	.	END=4618042;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999981:6,6:6-6,6-6:18,18,0,2:6,18:5,2:248.094:366.612,131.36:0.139319,0.139319:7.7e-44,1.47598e-05,0.999987	0/0:46:1.0:6,6:6-6,6-6:34,9,0,3:6,34:4,1|5,2:244.385:326.675,113.385:0.0,0.0:0.0,2.11434e-10,1.0
+chr1	4618737	.	GTTTGTTTGTTTGTTT	.	.	.	END=4618752;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999742:4,4:4-4,4-4:16,11,0,2:4,16:2,1|3,1:178.008:366.612,131.36:0.0,0.0:0.0,0.000134948,0.999865	0/0:32:1.0:4,4:4-4,4-4:23,9,0,0:4,23:NULL:176.817:326.675,113.385:0.0,0.0:0.0,8.71602e-07,1.0
+chr1	4619846	.	ACCACCACCACC	.	.	.	END=4619857;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999951:4,4:4-4,4-4:17,13,0,2:4,17:3,2:207.956:366.612,131.36:0.0,0.0:0.0,2.92333e-05,0.999971	0/0:32:0.999638:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.883:326.675,113.385:0.0,0.0:0.0,0.000296661,0.999705
+chr1	4619861	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	.	END=4619904;RU=tcca;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999879:11,11:11-11,11-11:17,12,0,0:11,17:NULL:190.814:366.612,131.36:0.0,0.0:8.87201e-36,8.94935e-05,0.999911	0/0:44:0.987388:11,11:10-11,10-11:9,19,0,15:11,9:3,2|4,1|5,1|6,1|7,2|8,4|9,2|10,2:319.568:326.675,113.385:0.45695,0.45695:4.95012e-19,0.00840036,0.991621
+chr1	4620573	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4620612;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.98897:22,22:22-23,22-23:11,14,0,17:22,11:9,1|10,2|11,1|12,2|13,1|14,1|15,1|16,4|21,4:323.128:366.612,131.36:0.253975,0.253975:0.0,0.00022719,0.999774	0/0:57:0.840529:20,20:19-20,19-20:21,24,0,11:19,6|20,15:6,2|9,1|10,1|11,1|12,1|15,2|16,1|19,2:414.162:326.675,113.385:0.382696,0.382696:1.23218e-12,0.15951,0.840564
+chr1	4621359	.	TTTTTTCTTTTTTCTTTTTTC	.	.	.	END=4621379;RU=ttttttc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998551:3,3:3-3,3-3:12,16,0,2:3,12:2,2:211.688:366.612,131.36:0.0,0.0:2.06014e-39,0.000943101,0.999059	0/0:45:1.0:3,3:3-3,3-3:24,21,0,0:3,24:NULL:289.748:326.675,113.385:0.0,0.0:0.0,8.82954e-07,1.0
+chr1	4624755	.	AGGCAGAGGCAGAGGCAGAGGCAG	.	.	.	END=4624778;RU=aggcag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99884:4,4:4-4,4-4:13,12,0,2:4,13:3,2:181.288:366.612,131.36:0.0,0.0:3.828e-42,0.000638048,0.999363	0/0:54:1.0:4,4:4-4,4-4:31,18,0,5:4,31:3,5:319.943:326.675,113.385:0.0,0.0:0.0,2.05728e-09,1.0
+chr1	4625336	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4625385;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.30768:29,30:10-30,10-31:3,9,0,3:29,3:13,1|23,1|30,1:126.424:366.612,131.36:8.90044,9.91346:4.7859e-17,0.126138,0.873959	0/0:25:0.745876:25,25:24-25,24-25:6,10,0,8:25,6:11,1|15,1|16,1|17,1|20,1|23,2|24,1:182.304:326.675,113.385:0.21692,0.21692:3.33279e-08,0.0666003,0.933493
+chr1	4626527	.	TTTGTTTGTTTG	.	.	.	END=4626538;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999129:3,3:3-3,3-3:13,14,0,2:3,13:2,2:191.306:366.612,131.36:0.0,0.0:1.39e-43,0.000304124,0.999697	0/0:30:0.999991:3,3:3-3,3-3:18,10,0,2:3,18:2,2:179.203:326.675,113.385:0.0,0.0:0.0,1.23552e-05,0.999987
+chr1	4626573	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=4626592;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:21,11,0,2:4,21:3,2:196.993:366.612,131.36:0.0,0.0:0.0,1.43994e-06,1.0	0/0:26:0.999967:4,4:4-4,4-4:18,8,0,0:4,18:NULL:147.753:326.675,113.385:0.0,0.0:0.0,4.01851e-05,0.999963
+chr1	4626799	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4626850;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:43:0.702903:25,26:25-26,23-26:5,23,0,15:25,3|26,2:5,1|6,1|7,1|8,1|9,1|13,1|15,2|17,1|18,2|21,1|22,2|25,1:367.648:366.612,131.36:0.569802,0.727436:0.0451303,0.841871,0.113169	1/0:45:0.678:24,26:23-28,26-28:12,14,0,17:23,3|24,2|25,2|26,5:6,1|7,1|10,1|11,1|12,2|14,1|15,2|16,3|17,1|18,1|22,1|24,2:328.255:326.675,113.385:1.38175,0.586754:0.000234479,0.977781,0.0220282
+chr1	4629230	.	AGAGAGAGAGAGAG	.	.	.	END=4629243;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:7,7:7-7,7-7:29,34,0,4:7,29:4,1|5,1|6,2:454.035:366.612,131.36:0.0,0.0:0.0,5.7408e-09,1.0	0/0:66:1.0:7,7:7-7,7-7:40,24,0,2:7,40:4,1|5,1:392.862:326.675,113.385:0.0,0.0:0.0,9.17971e-12,1.0
+chr1	4629974	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4630023;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.870331:23,23:23-25,23-25:10,16,0,3:22,2|23,8:14,1|16,1|19,1:227.158:366.612,131.36:0.767183,0.767183:0.995297,0.00471319,2.52889e-12	2/0:43:0.776363:24,25:12-25,12-25:9,23,0,10:24,4|25,5:5,1|8,1|9,1|11,1|15,1|16,2|17,1|18,1|21,1:325.245:326.675,113.385:5.93518,6.46133:0.000205716,0.786996,0.212843
+chr1	4631170	.	AAGGACAAAGGACAAAGGACA	.	.	.	END=4631190;RU=aaggaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,14,0,2:3,20:2,2:221.92:366.612,131.36:0.0,0.0:0.0,4.45143e-06,0.999995	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.712:326.675,113.385:0.0,0.0:0.0,5.48697e-06,0.999995
+chr1	4637541	.	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	.	.	END=4637620;RU=aagag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:57:0.997026:15,16:15-16,15-16:5,29,0,23:15,2|16,3:2,1|3,3|4,1|5,2|6,2|7,3|8,3|9,1|13,1|14,3|15,3:458.031:366.612,131.36:0.298675,0.21692:5.33947e-07,0.997066,0.00294373	1/1:37:0.666402:15,15:7-15,7-15:4,13,0,19:15,4:4,4|6,3|7,2|8,2|10,1|12,3|13,2|14,2:271.649:326.675,113.385:3.85559,3.85559:0.86852,0.131573,2.53072e-08
+chr1	4637824	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4637855;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.995618:20,20:20-20,20-20:13,8,0,11:20,13:5,1|6,2|7,1|8,1|10,1|14,2|16,1|18,1|19,1:218.423:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:33:0.641168:16,16:15-17,15-17:13,13,0,6:15,4|16,9:6,1|9,1|10,2|15,2:236.615:326.675,113.385:0.609213,0.609213:1.13819e-09,0.357257,0.64279
+chr1	4639717	.	ATTTATTTATTTATTT	.	.	.	END=4639732;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:29,12,0,6:4,29:3,6:267.88:366.612,131.36:0.0,0.0:0.0,5.25643e-09,1.0	0/0:34:1.0:4,4:4-4,4-4:25,7,0,2:4,25:3,2:184.06:326.675,113.385:0.0,0.0:0.0,1.53537e-07,1.0
+chr1	4642589	.	CTTTCTTTCTTT	.	.	.	END=4642600;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:24,17,0,2:3,24:2,2:268.451:366.612,131.36:0.0,0.0:0.0,1.27997e-07,1.0	0/0:43:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:275.826:326.675,113.385:0.0,0.0:0.0,8.98022e-07,1.0
+chr1	4643335	.	AAGGAAGGAAGG	.	.	.	END=4643346;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,8,0,4:3,30:2,4:221.947:366.612,131.36:0.0,0.0:0.0,1.92521e-09,1.0	0/0:49:1.0:3,3:3-3,3-3:29,17,0,3:3,29:2,3:290.615:326.675,113.385:0.0,0.0:0.0,9.02746e-09,1.0
+chr1	4648909	.	TTGTTTTGTTTTGTT	.	.	.	END=4648923;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.459673:3,3:1-3,1-3:3,19,0,0:3,3:NULL:180.672:366.612,131.36:0.508722,0.508722:2.71995e-10,0.425296,0.574792	0/0:23:0.912248:3,3:3-3,3-3:7,16,0,0:3,7:NULL:178.273:326.675,113.385:0.0,0.0:9.71457e-23,0.070973,0.929121
+chr1	4653049	.	TTTCTTTCTTTC	.	.	.	END=4653060;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:166.14:366.612,131.36:0.0,0.0:0.0,1.51626e-06,1.0	0/0:21:0.999371:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.355:326.675,113.385:0.0,0.0:0.0,0.000334464,0.999667
+chr1	4653751	.	AAAACAAAAACAAAAACA	.	.	.	END=4653768;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999993:3,3:1-3,1-3:21,21,0,0:3,21:NULL:274.047:366.612,131.36:0.863148,0.863148:0.0,1.14986e-05,0.999988	0/0:36:0.999992:3,3:3-3,3-3:18,16,0,2:3,18:2,2:230.727:326.675,113.385:0.0,0.0:0.0,1.67796e-05,0.999986
+chr1	4654599	.	GTTGGTTGGTTG	GTTGGTTGGTTGGTTG	.	.	END=4654610;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999927:4,4:3-4,3-4:17,16,0,0:4,17:NULL:216.93:366.612,131.36:0.270063,0.270063:0.0,3.87117e-05,0.999963	0/0:25:0.999943:3,3:3-3,3-3:17,8,0,0:3,17:NULL:139.825:326.675,113.385:0.0,0.0:0.0,3.49385e-05,0.999964
+chr1	4655498	.	TGTGTGTGTGTG	TGTGTGTGTG	.	.	END=4655509;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999717:5,5:4-5,4-5:16,25,0,0:5,16:NULL:286.158:366.612,131.36:0.334882,0.334882:0.999949,5.08902e-05,1.01e-43	0/0:35:0.999992:6,6:6-6,6-6:19,16,0,0:6,19:NULL:220.995:326.675,113.385:0.0,0.0:2.6249e-41,1.50959e-05,0.999986
+chr1	4661585	.	ACAACAACAACA	.	.	.	END=4661596;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:219.982:366.612,131.36:0.0,0.0:0.0,3.05948e-06,1.0	0/0:28:0.999994:4,4:4-4,4-4:19,9,0,0:4,19:NULL:163.593:326.675,113.385:0.0,0.0:0.0,1.5113e-05,0.999986
+chr1	4661836	.	GTGGGTGGGTGG	.	.	.	END=4661847;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999839:3,3:3-3,3-3:16,13,0,0:3,16:NULL:182.229:366.612,131.36:0.0,0.0:0.0,9.61132e-05,0.999904	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:189.198:326.675,113.385:0.0,0.0:0.0,3.92993e-07,1.0
+chr1	4663912	.	AATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATA	.	.	END=4663943;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.997908:6,6:6-6,6-6:13,13,0,0:6,13:NULL:175.356:366.612,131.36:0.0,0.0:0.999734,0.000269517,6.86485e-36	0/0:21:0.992977:8,8:8-8,8-8:10,6,0,5:8,10:3,1|4,1|5,1|6,1|7,1:132.276:326.675,113.385:0.0,0.0:1.45405e-32,0.0035816,0.996428
+chr1	4664837	.	GTTTGTTTGTTTGTTT	.	.	.	END=4664852;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:21,15,0,2:4,21:2,1|3,1:230.746:366.612,131.36:0.0,0.0:0.0,1.93539e-06,1.0	0/0:30:0.999068:4,4:2-4,2-4:14,15,0,0:4,14:NULL:192.754:326.675,113.385:0.997595,0.997595:4.60983e-38,0.000776317,0.999226
+chr1	4666307	.	AAACAAACAAACAAACAAAC	.	.	.	END=4666326;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999992:5,5:5-5,5-5:18,21,0,5:5,18:3,1|4,4:300.251:366.612,131.36:0.0,0.0:0.0,1.29769e-05,0.999987	0/0:39:1.00001:5,5:5-5,5-5:22,12,0,5:5,22:2,2|3,1|4,2:233.656:326.675,113.385:0.0,0.0:0.0,8.89071e-07,1.0
+chr1	4666832	.	TAAATAAATAAA	.	.	.	END=4666843;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:20,16,0,3:3,20:2,3:241.532:366.612,131.36:0.0,0.0:0.0,2.62971e-06,1.0	0/0:25:0.998541:3,3:3-3,3-3:12,10,0,3:3,12:2,3:161.795:326.675,113.385:0.0,0.0:5.2568e-41,0.00054033,0.999462
+chr1	4675038	.	AAAACAAAACAAAAC	.	.	.	END=4675052;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:3,3:3-3,3-3:38,26,0,0:3,38:NULL:382.892:366.612,131.36:0.0,0.0:0.0,3.33165e-11,1.0	0/0:50:1.0:3,3:3-3,3-3:34,14,0,2:3,34:2,2:279.961:326.675,113.385:0.0,0.0:0.0,2.22486e-10,1.0
+chr1	4675154	.	ATAAATAAATAA	.	.	.	END=4675165;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:19,26,0,2:3,19:2,2:322.023:366.612,131.36:0.0,0.0:0.0,8.43525e-06,0.999994	0/0:48:1.0:3,3:3-3,3-3:31,17,0,0:3,31:NULL:279.737:326.675,113.385:0.0,0.0:0.0,2.42215e-09,1.0
+chr1	4678790	.	AGTGAGTGAGTG	.	.	.	END=4678801;RU=agtg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.99837:3,3:3-3,3-3:13,8,0,0:3,13:NULL:127.939:366.612,131.36:0.0,0.0:8.83e-43,0.000853769,0.99915	0/0:30:0.999849:3,3:3-3,3-3:16,14,0,0:3,16:NULL:198.303:326.675,113.385:0.0,0.0:0.0,0.00010299,0.999896
+chr1	4678965	.	ACAGACAGACAG	.	.	.	END=4678976;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.558221:3,3:2-3,2-3:4,11,0,0:3,4:NULL:114.069:366.612,131.36:0.169767,0.169767:6.68288e-13,0.253675,0.746332	0/0:22:0.998838:3,3:3-3,3-3:13,9,0,0:3,13:NULL:138.47:326.675,113.385:0.0,0.0:1.0019e-41,0.000656811,0.999347
+chr1	4682367	.	TGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGT	.	.	END=4682390;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:1.0:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.642:366.612,131.36:0.0,0.0:1.0,1.95473e-06,0.0	0/0:25:0.999871:8,8:8-8,8-8:16,4,0,5:8,16:3,1|6,2|7,2:137.885:326.675,113.385:0.0,0.0:4.181e-42,4.04716e-05,0.999963
+chr1	4686168	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4686209;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.187797:22,22:22-24,22-24:2,10,0,11:22,2:5,1|6,1|8,1|10,1|11,1|12,2|14,1|15,2|17,1:189.185:366.612,131.36:0.74264,0.74264:0.00012952,0.20116,0.798757	0/0:32:0.914242:21,21:20-22,20-22:8,7,0,15:21,8:5,2|6,1|7,1|9,3|10,2|13,1|14,1|15,1|16,1|17,2:218.165:326.675,113.385:0.43744,0.43744:1.32364e-09,0.0367255,0.963338
+chr1	4686524	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=4686563;RU=attt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.151438:7,7:7-10,7-10:0,28,0,0:NULL:NULL:276.397:366.612,131.36:1.35046,1.35046:0.470992,0.446304,0.0828489	0/0:29:0.947364:10,10:10-10,10-10:7,12,0,10:10,7:4,1|5,5|7,1|8,1|9,2:216.363:326.675,113.385:0.0,0.0:6.04772e-18,0.0269432,0.973108
+chr1	4686877	.	CTCTTGCCTCTTGCCTCTTGC	CTCTTGCCTCTTGC	.	.	END=4686897;RU=ctcttgc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:1.00001:2,2:2-2,2-2:20,2,0,0:2,20:NULL:101.017:366.612,131.36:0.0,0.0:0.999994,6.05004e-06,0.0	0/0:29:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:171.243:326.675,113.385:0.0,0.0:0.0,1.90551e-05,0.999985
+chr1	4686995	.	CAACCAACCAAC	.	.	.	END=4687006;RU=caac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999964:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.776:366.612,131.36:0.0,0.0:0.0,2.7351e-05,0.999972	0/0:31:1.00001:3,3:3-3,3-3:22,7,0,2:3,22:2,2:165.401:326.675,113.385:0.0,0.0:0.0,6.19326e-07,1.0
+chr1	4687079	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=4687118;RU=tttg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.97354:9,9:9-9,9-9:9,9,0,2:9,9:4,1|6,1:135.748:366.612,131.36:0.0,0.0:0.992191,0.00782769,1.51507e-15	0/0:31:0.999473:10,10:10-10,10-10:14,9,0,8:10,14:3,2|4,1|5,2|6,1|8,1|9,1:196.508:326.675,113.385:0.0,0.0:4.71767e-36,0.000248488,0.999751
+chr1	4689281	.	CCGCCGCCGCCG	.	.	.	END=4689292;RU=ccg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:244.472:366.612,131.36:0.0,0.0:0.0,7.97427e-09,1.0	0/0:55:1.0:4,4:4-4,4-4:36,19,0,0:4,36:NULL:318.93:326.675,113.385:0.0,0.0:0.0,2.99631e-10,1.0
+chr1	4689823	.	AAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=4689834;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.570554:4,4:1-4,1-4:4,18,0,0:4,4:NULL:181.263:366.612,131.36:0.896026,0.896026:5.26906e-18,0.295691,0.704315	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:157.83:326.675,113.385:0.0,0.0:0.0,3.10126e-06,1.0
+chr1	4697276	.	CACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=4697299;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.99099:16,16:13-16,13-16:12,15,0,0:16,12:NULL:194.439:366.612,131.36:1.26733,1.26733:0.0,0.00227994,0.997724	0/0:29:0.982059:12,12:11-13,11-13:14,6,0,8:11,2|12,12:4,1|6,1|8,2|9,1|10,2|11,1:184.4:326.675,113.385:0.280742,0.280742:1.87038e-14,0.0171058,0.98293
+chr1	4697462	.	ATTATTATTATT	.	.	.	END=4697473;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:22,30,0,3:4,22:3,3:390.194:366.612,131.36:0.0,0.0:0.0,1.00364e-06,1.0	0/0:53:1.0:4,4:4-4,4-4:31,20,0,2:4,31:3,2:325.467:326.675,113.385:0.0,0.0:0.0,2.24018e-09,1.0
+chr1	4698068	.	GGAGGAGGAGGA	GGAGGAGGAGGAGGAGGA	.	.	END=4698079;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.00001:6,6:6-6,6-6:23,16,0,4:6,23:4,3|5,1:261.501:366.612,131.36:0.0990099,0.0990099:0.0,5.27864e-08,1.0	0/0:26:0.999945:4,4:4-4,4-4:17,6,0,3:4,17:3,3:141.186:326.675,113.385:0.0,0.0:0.0,2.1746e-05,0.999979
+chr1	4699171	.	TTTTGTTTTGTTTTG	.	.	.	END=4699185;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:40,16,0,0:3,40:NULL:305.478:366.612,131.36:0.0,0.0:0.0,5.41064e-12,1.0	0/0:37:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:196.267:326.675,113.385:0.0,0.0:0.0,4.22444e-08,1.0
+chr1	4700769	.	CCTCCTCCTCCT	.	.	.	END=4700780;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,14,0,2:4,21:3,2:226.516:366.612,131.36:0.0,0.0:0.0,2.88555e-06,1.0	0/0:22:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:101.437:326.675,113.385:0.0,0.0:0.0,1.29604e-05,0.999987
+chr1	4700784	.	CCACCACCACCA	.	.	.	END=4700795;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999947:4,4:4-4,4-4:17,13,0,3:4,17:3,3:209.523:366.612,131.36:0.0,0.0:0.0,2.62881e-05,0.999978	0/0:22:0.999771:4,4:4-4,4-4:15,4,0,3:4,15:3,3:116.705:326.675,113.385:0.0,0.0:7e-45,8.66633e-05,0.999917
+chr1	4702033	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4702088;RU=ac;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.949836:18,18:18-27,18-27:10,7,0,0:18,10:NULL:111.362:366.612,131.36:4.28531,4.28531:0.996482,0.00352666,0.0	2/0:38:0.603072:27,28:26-28,26-28:4,17,0,16:27,2|28,2:6,2|10,1|12,1|13,1|14,1|18,1|20,2|21,4|26,2|27,1:299.119:326.675,113.385:0.60323,0.547158:0.0242104,0.693448,0.282391
+chr1	4704115	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4704162;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	2/0:32:0.730822:23,24:23-24,24-24:8,14,0,10:23,3|24,5:5,2|11,2|15,3|17,1|18,1|23,1:250.512:326.675,113.385:0.498011,0.0990099:0.00034609,0.740631,0.259029
+chr1	4704841	.	TCTTTCTTTCTT	.	.	.	END=4704852;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:239.977:366.612,131.36:0.0,0.0:0.0,1.205e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:259.944:326.675,113.385:0.0,0.0:0.0,1.46928e-07,1.0
+chr1	4706710	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=4706733;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999301:6,6:6-6,6-6:14,12,0,9:6,14:3,4|4,4|5,1:233.335:366.612,131.36:0.0,0.0:1.17776e-34,0.000402795,0.999599	0/0:17:0.981548:6,6:6-6,6-6:9,4,0,4:6,9:3,2|4,1|5,1:103.685:326.675,113.385:0.0,0.0:8.31345e-23,0.00768594,0.992333
+chr1	4713034	.	ATATATATATAT	.	.	.	END=4713045;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.998997:6,6:6-7,6-7:14,12,0,0:6,14:NULL:161.232:366.612,131.36:0.345543,0.345543:1.41345e-23,0.000456233,0.999545	0/0:22:0.999591:6,6:6-6,6-6:15,7,0,0:6,15:NULL:125.478:326.675,113.385:0.0,0.0:4.14375e-25,0.000265164,0.999736
+chr1	4715718	.	TTGTTGTTGTTG	.	.	.	END=4715729;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999965:4,4:4-4,4-4:19,16,0,0:4,19:NULL:221.081:366.612,131.36:0.0,0.0:0.0,3.13059e-05,0.999971	0/0:30:1.0:4,4:4-4,4-4:19,9,0,2:4,19:3,2:175.124:326.675,113.385:0.0,0.0:0.0,8.15183e-06,0.999994
+chr1	4717842	.	TCTTTCTTTCTTTCTT	.	.	.	END=4717857;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:25,24,0,2:4,25:3,2:339.318:366.612,131.36:0.0,0.0:0.0,3.68868e-07,1.0	0/0:41:0.999986:4,4:4-4,4-4:20,21,0,0:4,20:NULL:270.973:326.675,113.385:0.0,0.0:0.0,2.59705e-05,0.999978
+chr1	4718882	.	AACTAACTAACT	.	.	.	END=4718893;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,20,0,2:3,24:2,2:285.668:366.612,131.36:0.0,0.0:0.0,4.09028e-07,1.0	0/0:26:0.999882:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.664:326.675,113.385:0.0,0.0:0.0,6.8464e-05,0.999933
+chr1	4719899	.	CACACACACACACACACA	CACACACACACACACACACA	.	.	END=4719916;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:0.997642:10,10:10-15,10-15:34,18,0,3:10,34:9,2|15,1:344.303:366.612,131.36:2.24763,2.24763:0.0,1.18615e-10,1.0	0/0:31:1.0:9,9:9-9,9-9:24,6,0,0:9,24:NULL:154.629:326.675,113.385:0.0990099,0.0990099:9.45833e-37,6.36154e-07,1.0
+chr1	4722124	.	AAACAAACAAACAAAC	AAACAAAC,AAACAAACAAAC	.	.	END=4722139;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.184894:2,3:1-4,2-4:0,27,0,2:NULL:3,2:288.601:366.612,131.36:0.914864,0.61098:0.38494,0.537507,0.0776752	0/0:30:0.999591:4,4:4-4,4-4:14,10,0,6:4,14:2,3|3,3:188.17:326.675,113.385:0.0,0.0:4.64806e-36,0.000157759,0.999843
+chr1	4725802	.	ACATACATACAT	.	.	.	END=4725813;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-9,3-9:32,16,0,0:3,32:NULL:276.69:366.612,131.36:2.76732,2.76732:0.0,2.35909e-09,1.0	0/0:35:1.0:3,3:3-3,3-3:27,8,0,0:3,27:NULL:182.575:326.675,113.385:0.0,0.0:0.0,4.38532e-08,1.0
+chr1	4726010	.	TTGCTTTGCTTTGCTTTGCTTTGCT	TTGCT	.	.	END=4726034;RU=ttgct;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0189889:1,1:1-5,1-5:0,9,0,0:NULL:NULL:79.2751:366.612,131.36:1.56624,1.56624:0.226535,0.525124,0.248383	0/0:34:1.00001:5,5:4-5,4-5:22,9,0,2:5,22:2,1|3,1:187.145:326.675,113.385:0.236383,0.236383:0.0,2.3239e-06,1.0
+chr1	4727699	.	ATAAATAAATAA	.	.	.	END=4727710;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:3:0.444226:3,3:3-3,3-3:3,0,0,0:3,3:NULL:11.7222:366.612,131.36:0.0,0.0:2.47845e-10,0.222364,0.777675	0/0:27:0.998966:3,3:3-3,3-3:13,14,0,0:3,13:NULL:177.13:326.675,113.385:0.0,0.0:4.2333e-41,0.000612016,0.999392
+chr1	4730651	.	CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	CTC	.	.	END=4730686;RU=ctc;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0285318:1,1:1-3,1-3:0,12,0,0:NULL:NULL:107.704:366.612,131.36:0.629628,0.629628:0.688685,0.293806,0.0175481	0/0:21:0.9577:12,12:11-12,11-12:8,9,0,3:12,8:8,2|11,1:137.236:326.675,113.385:0.382696,0.382696:2.19064e-17,0.0232822,0.976764
+chr1	4732027	.	CTCTCTCTCTCTCT	CTCTCTCTCTCT	.	.	END=4732040;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.0:6,6:6-6,6-6:40,9,0,0:6,40:NULL:244.43:366.612,131.36:0.0,0.0:1.0,6.78159e-12,0.0	0/0:39:0.999355:7,7:7-8,7-8:23,12,0,4:7,21|8,2:4,1|5,1|6,2:242.981:326.675,113.385:0.169767,0.169767:1.39357e-38,6.40975e-07,1.0
+chr1	4736939	.	AAATAAATAAATAAAT	.	.	.	END=4736954;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999453:4,4:4-4,4-4:15,16,0,0:4,15:NULL:209.92:366.612,131.36:0.0,0.0:4.8e-44,0.000465687,0.999537	0/0:14:0.826804:4,4:4-4,4-4:6,8,0,0:4,6:NULL:94.3292:326.675,113.385:0.0,0.0:3.84179e-18,0.110392,0.889705
+chr1	4744698	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTT	.	.	END=4744727;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999849:3,3:3-3,3-3:16,15,0,3:3,16:2,3:226.572:366.612,131.36:0.0,0.0:0.99998,1.92607e-05,0.0	0/0:29:0.999864:6,6:6-6,6-6:16,9,0,4:6,16:2,1|3,2|5,1:173.344:326.675,113.385:0.0,0.0:0.0,8.61569e-05,0.999917
+chr1	4746881	.	TAGATAGATAGA	.	.	.	END=4746892;RU=taga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,1|3,1:188.564:366.612,131.36:0.0,0.0:0.0,2.9315e-06,1.0	0/0:20:0.99898:3,3:3-3,3-3:13,7,0,0:3,13:NULL:113.283:326.675,113.385:0.0,0.0:1.927e-42,0.000512317,0.999491
+chr1	4749824	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=4749859;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.491197:12,14:12-19,12-19:6,15,0,0:12,2|13,2|14,2:NULL:170.202:366.612,131.36:2.80724,2.22986:0.998504,0.00150085,2.85157e-16	0/0:7:0.355433:18,18:17-18,17-18:3,3,0,0:18,3:NULL:40.6567:326.675,113.385:0.607117,0.607117:0.00025367,0.373956,0.625845
+chr1	4755604	.	GGAGGGAGGGAGGGAG	.	.	.	END=4755619;RU=ggag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.303264:4,4:4-4,4-4:2,5,0,0:4,2:NULL:51.7998:366.612,131.36:0.0,0.0:1.04381e-05,0.377089,0.622955	0/0:15:0.994918:4,4:4-4,4-4:11,2,0,2:4,11:2,2:74.6159:326.675,113.385:0.0,0.0:3.27251e-26,0.00232733,0.997678
+chr1	4755631	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	.	END=4755720;RU=gagag;PERIOD=5;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.0345281:18,18:1-18,1-18:0,4,0,4:NULL:7,1|13,1|15,2:63.3554:366.612,131.36:4.54331,4.54331:0.631007,0.33457,0.0345084	0/0:21:0.204562:18,18:6-18,6-18:2,6,0,12:18,2:3,1|4,3|5,1|6,1|8,2|12,2|13,1|16,1:149.302:326.675,113.385:5.75506,5.75506:0.000265565,0.60808,0.39172
+chr1	4757329	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=4757372;RU=ct;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.0928393:18,18:18-21,18-21:0,24,0,0:NULL:NULL:219.478:366.612,131.36:1.4276,1.4276:0.50981,0.412801,0.0774748	0/0:17:0.290199:22,22:18-22,18-22:6,7,0,3:21,2|22,4:5,1|6,1|12,1:120.818:326.675,113.385:1.77374,1.77374:0.00012047,0.657285,0.34262
+chr1	4758257	.	AATAAATAAATA	AATA	.	.	END=4758268;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.247138:1,1:1-3,1-3:0,22,0,0:NULL:NULL:224.468:366.612,131.36:0.911644,0.911644:0.474337,0.438266,0.0875358	0/0:19:0.992514:3,3:3-3,3-3:10,7,0,2:3,10:2,2:120.596:326.675,113.385:0.0,0.0:2.10875e-29,0.00267692,0.99733
+chr1	4761246	.	TTTGTTTGTTTG	TTTGTTTG	.	.	END=4761257;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.999753:2,2:2-2,2-2:15,9,0,0:2,15:NULL:139.97:366.612,131.36:0.0,0.0:0.999841,0.000161256,4.8e-44	0/0:26:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:129.24:326.675,113.385:0.0,0.0:0.0,2.46117e-06,1.0
+chr1	4765570	.	AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA	AAAGA,AAAGAAAAGAAAAGAAAAGAAAAGA	.	.	END=4765609;RU=aaaga;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0327166:1,1:1-5,1-5:0,9,0,0:NULL:NULL:86.9262:366.612,131.36:1.26307,1.26307:0.53443,0.419224,0.0465006	2/2:1:0.020438:5,5:8-8,8-8:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
+chr1	4767274	.	TTTTGTTTTGTTTTG	TTTTGTTTTG	.	.	END=4767288;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.00001:2,2:2-2,2-2:22,11,0,0:2,22:NULL:183.799:366.612,131.36:0.0,0.0:1.0,1.05278e-06,0.0	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.989:326.675,113.385:0.0,0.0:0.0,1.98159e-06,1.0
+chr1	4769727	.	TTTTTTTGTTTTTTTGTTTTTTTG	TTTTTTTG	.	.	END=4769750;RU=tttttttg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.164897:1,1:1-2,1-2:0,27,0,0:NULL:NULL:231.409:366.612,131.36:0.412766,0.412766:0.544221,0.398179,0.057756	0/0:8:0.653109:3,3:1-3,1-3:4,3,0,0:3,4:NULL:42.5872:326.675,113.385:0.968882,0.968882:1.43076e-12,0.160707,0.839368
+chr1	4772542	.	AATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4772569;RU=aata;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.275424:7,7:7-8,7-8:2,2,0,2:7,2:3,1|5,1:43.124:366.612,131.36:0.371782,0.371782:6.84117e-06,0.345865,0.654163	0/0:23:0.955763:7,7:7-7,7-7:7,9,0,7:7,7:3,1|5,2|6,4:162.133:326.675,113.385:0.0,0.0:5.84855e-18,0.0186585,0.981379
+chr1	4777183	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=4777216;RU=tc;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.998464:8,8:8-8,8-8:13,12,0,3:8,13:7,3:186.353:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:31:0.754583:17,17:16-17,16-17:5,14,0,11:17,5:4,1|5,2|6,1|9,1|10,1|11,1|12,1|14,1|16,2:236.182:326.675,113.385:0.442564,0.442564:3.68037e-08,0.107497,0.892602
+chr1	4778087	.	TGTGTGTGTGTG	TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG	.	.	END=4778098;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.982749:7,9:7-9,7-9:4,23,0,2:7,2|9,2:6,2:239.527:366.612,131.36:0.5634,0.665211:4.26849e-27,6.03865e-05,0.999941	0/0:31:0.996471:6,6:6-7,6-7:12,18,0,0:6,12:NULL:212.097:326.675,113.385:0.169767,0.169767:7.9323e-14,0.00208419,0.997921
+chr1	4779799	.	TGTGTGTGTGTGTG	.	.	.	END=4779812;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999841:7,7:7-7,7-7:16,14,0,0:7,16:NULL:192.429:366.612,131.36:0.0,0.0:2.56299e-31,8.08966e-05,0.999919	0/0:18:0.999693:7,7:7-7,7-7:15,1,0,2:7,15:5,1|6,1:84.5827:326.675,113.385:0.0,0.0:1.64184e-29,0.0001191,0.999881
+chr1	4780052	.	GTTTGTTTGTTT	.	.	.	END=4780063;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999904:3,3:3-3,3-3:17,19,0,0:3,17:NULL:238.62:366.612,131.36:0.0,0.0:0.0,7.31266e-05,0.999926	0/0:29:1.00001:3,3:3-3,3-3:20,7,0,2:3,20:2,2:156.501:326.675,113.385:0.0,0.0:0.0,2.69589e-06,1.0
+chr1	4781290	.	AAAACAAAACAAAACAAAAC	AAAAC	.	.	END=4781309;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.077236:1,1:1-3,1-3:0,9,0,0:NULL:NULL:83.6948:366.612,131.36:0.885129,0.885129:0.393228,0.473883,0.132974	0/0:22:0.998513:4,4:4-4,4-4:13,6,0,3:4,13:3,3:130.081:326.675,113.385:0.0,0.0:3.564e-42,0.000659424,0.999346
+chr1	4783247	.	ATATATATATATAT	ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATAT	.	.	END=4783260;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:15:0.914663:15,16:15-16,15-16:5,10,0,0:15,3|16,2:NULL:117.259:366.612,131.36:0.38423,0.661813:0.0,0.0,1.0	0/0:16:0.97951:7,7:6-7,6-7:10,5,0,0:7,10:NULL:92.6401:326.675,113.385:0.253975,0.253975:2.75527e-13,0.0112003,0.988822
+chr1	4783908	.	AAAAAACAAAAAACAAAAAAC	AAAAAAC	.	.	END=4783928;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.121674:1,1:1-2,1-2:0,13,0,0:NULL:NULL:122.189:366.612,131.36:0.38244,0.38244:0.327036,0.514355,0.158633	0/0:20:0.999388:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.87:326.675,113.385:0.0,0.0:0.0,0.00041394,0.99959
+chr1	4789575	.	TGAATGAATGAA	.	.	.	END=4789586;RU=tgaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.544:366.612,131.36:0.0,0.0:0.0,7.52438e-07,1.0	0/0:22:0.999979:3,3:3-3,3-3:18,4,0,0:3,18:NULL:103.76:326.675,113.385:0.0,0.0:0.0,1.71272e-05,0.999986
+chr1	4790408	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG,AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=4790503;RU=aag;PERIOD=3;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0413989:14,14:14-16,14-16:0,14,0,3:NULL:5,1|12,1|14,1:150.9:366.612,131.36:0.752866,0.752866:1.0,0.0,0.0	2/2:28:0.0217444:31,31:6-32,6-32:0,12,0,13:NULL:6,1|7,2|9,1|12,1|15,1|22,1|28,4|29,1|31,1:211.088:326.675,113.385:11.7012,11.7012:0.153782,0.603073,0.243224
+chr1	4790591	.	AATAATAATAATAATAAT	AATAATAATAATAAT	.	.	END=4790608;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:1.00001:5,5:5-5,5-5:22,10,0,0:5,22:NULL:183.042:366.612,131.36:0.0,0.0:1.0,1.20863e-06,1e-44	0/0:19:0.999865:6,6:6-6,6-6:16,1,0,2:6,16:4,1|5,1:86.8798:326.675,113.385:0.0,0.0:9.7689e-37,5.64849e-05,0.999947
+chr1	4794293	.	AGACAGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGAC	.	.	END=4794312;RU=agac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:7,7:7-7,7-7:20,16,0,5:7,20:2,1|3,2|6,2:262.128:366.612,131.36:0.0,0.0:0.0,8.52709e-07,1.0	0/0:46:0.999962:5,5:4-5,4-5:17,18,0,10:5,17:2,2|3,2|4,6:306.135:326.675,113.385:0.236383,0.236383:0.0,1.79042e-05,0.999986
+chr1	4795085	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	END=4795132;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.983372:11,11:10-11,10-11:10,7,0,5:11,10:2,1|4,1|6,2|8,1:148.19:366.612,131.36:0.374147,0.374147:0.993804,0.00621315,1.9132e-19	0/0:18:0.808038:12,12:11-12,11-12:6,5,0,6:12,6:4,2|6,1|7,2|9,1:115.137:326.675,113.385:0.486863,0.486863:1.85358e-15,0.117728,0.882373
+chr1	4795238	.	GTTTTGTTTTGTTTTGTTTT	GTTTTGTTTT	.	.	END=4795257;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0361998:2,2:1-2,1-2:0,10,0,0:NULL:NULL:91.2136:366.612,131.36:0.497026,0.497026:0.251267,0.543828,0.204912	0/0:17:0.999259:4,4:4-4,4-4:14,3,0,0:4,14:NULL:82.904:326.675,113.385:0.0,0.0:0.0,0.000434742,0.999568
+chr1	4796020	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=4796043;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:2,2:223.615:366.612,131.36:0.0,0.0:1.0,1.53343e-06,0.0	0/0:47:0.999782:6,6:5-6,5-6:15,24,0,7:6,15:2,1|3,1|4,2|5,3:330.305:326.675,113.385:0.21692,0.21692:3.8787e-40,0.000165203,0.999835
+chr1	4802916	.	TCTCTCTCTCTCTC	TCTCTCTCTC,TCTCTCTCTCTCTCTC	.	.	END=4802929;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.942033:5,8:5-8,7-8:8,14,0,0:5,2|7,2|8,4:NULL:166.965:366.612,131.36:0.907009,0.442564:2.56506e-07,0.96656,0.0335034	0/0:32:0.999643:7,7:6-7,6-7:16,14,0,0:7,16:NULL:187.072:326.675,113.385:0.258566,0.258566:1.91725e-19,0.000245916,0.999757
+chr1	4804071	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=4804095;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.0894039:5,5:2-5,2-5:0,11,0,4:NULL:4,4:127.203:366.612,131.36:0.778346,0.778346:0.129595,0.474151,0.396449	0/0:28:0.999989:5,5:5-5,5-5:18,8,0,2:5,18:3,1|4,1:156.963:326.675,113.385:0.0,0.0:0.0,1.81889e-05,0.999985
+chr1	4804879	.	AAAAACAAAAACAAAAAC	.	.	.	END=4804896;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999446:3,3:3-3,3-3:14,20,0,0:3,14:NULL:236.542:366.612,131.36:0.0,0.0:0.0,0.000471379,0.99953	0/0:28:0.999832:3,3:3-3,3-3:16,12,0,0:3,16:NULL:173.907:326.675,113.385:0.0,0.0:0.0,0.00012135,0.99988
+chr1	4805189	.	ATTTATTTATTT	ATTTATTTATTTATTT	.	.	END=4805200;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.999411:3,4:3-4,4-4:18,5,0,2:3,6|4,12:2,2:141.207:366.612,131.36:0.323567,0.0:0.0,7.80262e-09,1.0	0/0:24:0.999635:3,3:3-3,3-3:15,9,0,0:3,15:NULL:140.572:326.675,113.385:0.0,0.0:0.0,0.000191892,0.999811
+chr1	4806133	.	TGTGTGTGTGTGTG	.	.	.	END=4806146;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995514:7,7:7-7,7-7:11,16,0,3:7,11:5,2|6,1:212.496:366.612,131.36:0.0,0.0:9.26685e-23,0.00238463,0.997624	0/0:34:0.999992:7,7:7-7,7-7:19,15,0,0:7,19:NULL:214.097:326.675,113.385:0.0,0.0:6.24431e-39,1.63575e-05,0.999986
+chr1	4806257	.	CTGACTGACTGA	.	.	.	END=4806268;RU=ctga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:159.946:366.612,131.36:0.0,0.0:0.0,2.69918e-07,1.0	0/0:25:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.994:326.675,113.385:0.0,0.0:0.0,2.00295e-05,0.99998
+chr1	4806381	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCT	.	.	END=4806412;RU=ttct;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0223139:1,1:1-2,1-2:0,9,0,0:NULL:NULL:81.0159:366.612,131.36:0.486863,0.486863:0.428852,0.485257,0.0860298	0/0:26:0.445733:8,8:6-8,6-8:3,10,0,13:8,3:2,1|3,1|4,1|5,3|6,7:196.493:326.675,113.385:0.390054,0.390054:0.000803766,0.336268,0.662947
+chr1	4808103	.	GCCTGCCTGCCT	.	.	.	END=4808114;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:189.832:366.612,131.36:0.0,0.0:0.0,6.95971e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:195.369:326.675,113.385:0.0,0.0:0.0,2.4422e-07,1.0
+chr1	4809703	.	ATGAATGAATGAATGA	.	.	.	END=4809718;RU=atga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999994:4,4:4-4,4-4:19,5,0,0:4,19:NULL:118.253:366.612,131.36:0.0,0.0:0.0,1.32162e-05,0.999987	0/0:25:0.99999:4,4:4-4,4-4:18,5,0,2:4,18:2,1|3,1:134.833:326.675,113.385:0.0,0.0:0.0,1.84135e-05,0.999985
+chr1	4809829	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=4809848;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:20,13,0,3:4,20:2,1|3,2:222.309:366.612,131.36:0.0,0.0:0.0,3.33137e-06,1.0	0/0:31:1.0:4,4:4-4,4-4:21,10,0,0:4,21:NULL:174.053:326.675,113.385:0.0,0.0:0.0,5.23654e-06,0.999995
+chr1	4809864	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4809903;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.88101:19,19:18-20,18-20:14,15,0,14:18,3|19,11:4,1|6,2|8,1|9,1|10,2|13,1|14,1|15,1|16,2|17,1|18,1:319.085:366.612,131.36:0.410384,0.410384:0.998451,0.00155301,1.22279e-11	0/2:43:0.997816:20,21:20-20,20-21:17,11,0,14:19,2|20,12|21,3:5,1|7,3|9,1|13,2|14,1|16,1|17,3|19,1|21,1:302.448:326.675,113.385:0.0990099,0.521285:9.21874e-20,2.73005e-07,1.0
+chr1	4810353	.	TTTGTTTGTTTG	.	.	.	END=4810364;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,16,0,2:3,24:2,2:248.206:366.612,131.36:0.0,0.0:0.0,2.23073e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:203.079:326.675,113.385:0.0,0.0:0.0,2.59322e-09,1.0
+chr1	4810746	.	CATGCATGCATG	.	.	.	END=4810757;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:25,25,0,0:3,25:NULL:311.433:366.612,131.36:0.0,0.0:0.0,1.80033e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.068:326.675,113.385:0.0,0.0:0.0,7.25219e-07,1.0
+chr1	4810950	.	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	.	.	END=4811123;RU=ttctcc;PERIOD=6;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.284642:15,19:7-15,7-21:3,3,0,14:15,3:4,1|5,2|6,2|7,3|8,2|9,1|10,1|13,1|19,1:141.767:366.612,131.36:3.80837,5.76309:1.0,0.0,0.0	3/4:51:0.181505:20,28:4-20,24-33:0,13,7,28:NULL:2,1|3,1|4,1|5,3|6,4|7,3|8,1|12,2|13,1|15,3|16,2|17,3|18,1|19,1|20,1:451.787:326.675,113.385:4.3648,2.33042:0.587313,0.412763,0.0
+chr1	4811609	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=4811650;RU=ga;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.795355:21,21:19-21,19-21:6,12,0,6:21,6:4,1|8,1|12,1|14,1|15,1|16,1:187.852:366.612,131.36:0.825531,0.825531:1.10236e-12,0.124233,0.875868	0/0:48:0.999961:21,21:19-21,19-21:25,13,0,9:19,2|20,2|21,21:5,1|8,1|11,2|12,2|16,1|17,1|21,1:310.978:326.675,113.385:0.339533,0.339533:0.0,4.87385e-05,0.999955
+chr1	4811806	.	TTTTGTTTTGTTTTG	.	.	.	END=4811820;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:26,9,0,3:3,26:2,3:205.931:366.612,131.36:0.0,0.0:0.0,2.39576e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:29,10,0,4:3,29:2,4:232.858:326.675,113.385:0.0,0.0:0.0,3.1766e-09,1.0
+chr1	4814327	.	AAATAAATAAAT	AAATAAAT	.	.	END=4814338;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:26:0.999999:2,3:2-2,2-3:12,14,0,0:2,9|3,3:NULL:181.575:366.612,131.36:0.0,0.36513:8.4454e-07,1.0,1.92825e-22	0/0:22:0.998738:3,3:3-3,3-3:13,9,0,0:3,13:NULL:134.801:326.675,113.385:0.0,0.0:6.24e-42,0.000728609,0.999272
+chr1	4815548	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4815577;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.978896:16,16:13-16,13-16:13,7,0,2:15,2|16,11:11,1|13,1:143.644:366.612,131.36:1.12671,1.12671:5.2269e-24,0.00115283,0.998853	0/0:38:0.99597:15,15:15-15,15-15:16,12,0,10:14,2|15,14:5,2|6,2|8,1|10,1|11,1|12,1|13,1|14,1:267.548:326.675,113.385:0.0990099,0.0990099:7.71523e-18,0.00342976,0.99658
+chr1	4817565	.	CAGCAGCAGCAG	.	.	.	END=4817576;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999968:4,4:4-4,4-4:19,22,0,0:4,19:NULL:273.457:366.612,131.36:0.0,0.0:0.0,3.97051e-05,0.999963	0/0:46:1.0:4,4:4-4,4-4:29,17,0,0:4,29:NULL:271.562:326.675,113.385:0.0,0.0:0.0,2.73496e-08,1.0
+chr1	4819449	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=4819472;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.630721:4,4:3-4,3-4:4,13,0,2:4,4:3,2:153.492:366.612,131.36:0.330165,0.330165:0.92114,0.0789544,1.7293e-13	0/0:38:0.999954:6,6:6-8,6-8:16,13,0,8:6,16:2,1|3,1|4,1|5,5:240.238:326.675,113.385:0.797014,0.797014:3e-45,2.72189e-05,0.999972
+chr1	4820555	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4820572;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99982:10,10:10-10,10-10:16,10,0,5:10,16:6,1|7,2|9,2:200.216:366.612,131.36:0.0,0.0:0.0,2.30314e-05,0.999979	0/2:62:0.351083:9,12:9-9,9-14:31,20,0,10:9,31:4,3|5,3|6,1|7,1|12,2:410.123:326.675,113.385:0.0,1.53456:0.0,1.54242e-14,1.0
+chr1	4822262	.	TGTTTGTTTGTT	TGTT	.	.	END=4822273;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.0821131:1,1:1-3,1-3:0,25,0,0:NULL:NULL:224.832:366.612,131.36:0.556749,0.556749:0.273043,0.514863,0.212099	0/0:43:1.0:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.716:326.675,113.385:0.0,0.0:0.0,6.86054e-07,1.0
+chr1	4822494	.	CACACACACACA	.	.	.	END=4822505;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:29,13,0,0:6,29:NULL:234.205:366.612,131.36:0.0,0.0:0.0,1.70101e-08,1.0	0/0:51:1.00001:6,6:6-7,6-7:23,20,0,7:6,23:4,1|5,5|6,1:327.044:326.675,113.385:0.169767,0.169767:0.0,2.23788e-07,1.0
+chr1	4823989	.	TGTCTGTCTGTCTGTCTGTCTGTC	TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC	.	.	END=4824012;RU=tgtc;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.00001:8,8:8-8,8-8:22,11,0,7:8,22:2,1|3,2|4,1|5,1|6,2:243.729:366.612,131.36:0.0990099,0.0990099:0.0,3.8867e-07,1.0	0/0:36:1.00001:6,6:6-6,6-6:21,12,0,3:6,21:3,1|5,2:217.679:326.675,113.385:0.0,0.0:0.0,1.83163e-06,1.0
+chr1	4831112	.	CTGGCTGGCTGG	.	.	.	END=4831123;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:275.992:366.612,131.36:0.0,0.0:0.0,5.25396e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:30,10,0,0:3,30:NULL:208.27:326.675,113.385:0.0,0.0:0.0,5.0826e-09,1.0
+chr1	4832670	.	CTCCCTCCCTCC	CTCCCTCCCTCCCTCC	.	.	END=4832681;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:25,23,0,2:3,25:2,2:329.873:366.612,131.36:0.0,0.0:0.0,1.7607e-07,1.0	0/1:48:0.359416:3,4:3-3,3-4:23,22,0,3:3,23:2,2|4,1:343.057:326.675,113.385:0.0,0.519212:0.0,5.03971e-08,1.0
+chr1	4835862	.	TTTTGTTTTGTTTTG	.	.	.	END=4835876;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:194.431:366.612,131.36:0.0,0.0:0.0,1.38502e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:199.012:326.675,113.385:0.0,0.0:0.0,2.26284e-08,1.0
+chr1	4836013	.	TTTCTTTTCTTTTCT	.	.	.	END=4836027;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.99706:3,3:3-3,3-3:11,10,0,2:3,11:2,2:144.957:366.612,131.36:0.0,0.0:4.62434e-36,0.00126048,0.998746	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:199.94:326.675,113.385:0.0,0.0:0.0,7.37652e-07,1.0
+chr1	4836682	.	TTTATTTATTTA	.	.	.	END=4836693;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999993:3,3:3-3,3-3:19,17,0,0:3,19:NULL:231.07:366.612,131.36:0.0,0.0:0.0,1.7298e-05,0.999986	0/0:33:0.999991:3,3:3-3,3-3:18,13,0,2:3,18:2,2:204.284:326.675,113.385:0.0,0.0:0.0,1.45272e-05,0.999987
+chr1	4837261	.	TTCATTCATTCATTCATTCA	TTCA	.	.	END=4837280;RU=ttca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0690482:1,1:1-1,1-1:0,16,0,0:NULL:NULL:142.057:366.612,131.36:0.19802,0.19802:0.394443,0.481659,0.12399	0/0:20:0.99859:5,5:5-5,5-5:13,7,0,0:5,13:NULL:113.046:326.675,113.385:0.0,0.0:8.49476e-37,0.000864304,0.999141
+chr1	4840709	.	AATAAATAAATA	.	.	.	END=4840720;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999165:3,3:3-3,3-3:13,16,0,0:3,13:NULL:199.55:366.612,131.36:0.0,0.0:1.36e-43,0.000665667,0.999339	0/0:22:0.951778:3,3:3-3,3-3:8,14,0,0:3,8:NULL:157.058:326.675,113.385:0.0,0.0:1.58998e-26,0.0305701,0.969486
+chr1	4841846	.	AAAGAAAGAAAG	AAAGAAAG	.	.	END=4841857;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.00001:2,2:2-2,2-2:22,14,0,0:2,22:NULL:212.561:366.612,131.36:0.0,0.0:1.0,7.47019e-07,0.0	0/0:20:0.999869:3,3:3-3,3-3:16,4,0,0:3,16:NULL:102.145:326.675,113.385:0.0,0.0:0.0,6.76053e-05,0.999933
+chr1	4843541	.	TTTGTTTGTTTG	.	.	.	END=4843552;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:240.43:366.612,131.36:0.0,0.0:0.0,1.4138e-08,1.0	0/0:26:1.00001:3,3:3-3,3-3:20,4,0,2:3,20:2,2:127.33:326.675,113.385:0.0,0.0:0.0,2.47031e-06,1.0
+chr1	4844779	.	AAAATAAAATAAAAT	.	.	.	END=4844793;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999617:3,3:3-3,3-3:15,11,0,0:3,15:NULL:162.206:366.612,131.36:0.0,0.0:6.3e-44,0.000244671,0.999758	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.43:326.675,113.385:0.0,0.0:0.0,2.47012e-06,1.0
+chr1	4845843	.	AAACAAACAAACAAACAAAC	.	.	.	END=4845862;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:5,5:5-5,5-5:23,27,0,2:5,23:3,1|4,1:355.553:366.612,131.36:0.0,0.0:0.0,5.15931e-07,1.0	0/0:36:0.999957:5,5:5-5,5-5:17,14,0,5:5,17:3,3|4,2:229.622:326.675,113.385:0.0,0.0:0.0,2.45349e-05,0.999978
+chr1	4846452	.	CCAACCAACCAA	.	.	.	END=4846463;RU=ccaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.981252:3,3:3-3,3-3:9,11,0,2:3,9:2,2:146.9:366.612,131.36:0.0,0.0:1.18375e-29,0.00809632,0.991921	0/0:21:0.99958:3,3:3-3,3-3:14,5,0,2:3,14:2,2:113.893:326.675,113.385:0.0,0.0:0.0,0.000159645,0.999842
+chr1	4848400	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4848435;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:7,7:7-7,7-7:21,25,0,5:7,21:3,1|4,2|5,1|6,1:348.189:366.612,131.36:0.0,0.0:1.0,1.1066e-06,0.0	0/0:34:0.977879:9,9:8-9,8-9:9,15,0,9:9,9:3,1|5,2|6,2|7,2|8,2:239.873:326.675,113.385:0.437216,0.437216:9.02383e-25,0.011419,0.988606
+chr1	4849030	.	AAAGAAAGAAAGAAAG	.	.	.	END=4849045;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:245.114:366.612,131.36:0.0,0.0:0.0,2.42971e-06,1.0	0/0:30:0.999962:4,4:4-4,4-4:18,12,0,0:4,18:NULL:181.991:326.675,113.385:0.0,0.0:0.0,4.23994e-05,0.999957
+chr1	4849772	.	CAACAACAACAACAACAACAACAACAA	CAACAACAACAACAA	.	.	END=4849798;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999796:5,5:5-5,5-5:16,10,0,0:5,16:NULL:158.209:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:38:1.0:9,9:9-9,9-9:20,14,0,3:9,20:4,1|5,1|7,1:234.633:326.675,113.385:0.0990099,0.0990099:0.0,1.02211e-05,0.999993
+chr1	4850587	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4850616;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.935192:22,24:22-26,24-26:7,7,0,11:22,2|24,5:4,1|8,1|10,2|13,1|16,1|18,1|19,1|20,1|23,1|24,1:190.511:366.612,131.36:1.82006,0.507951:0.0,0.0,1.0	0/0:27:0.504365:15,15:12-15,12-15:8,8,0,9:14,2|15,6:9,1|11,2|13,3|14,3:186.57:326.675,113.385:0.877565,0.877565:1.92327e-06,0.477716,0.522377
+chr1	4858043	.	GGGCCGGGCCGGGCCGGGCC	GGGCCGGGCCGGGCC	.	.	END=4858062;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:54:1.0:3,4:3-4,4-4:35,19,0,0:3,6|4,29:NULL:341.472:366.612,131.36:0.390807,0.0:0.0,1.0,3.05897e-06	0/0:46:1.0:4,4:4-4,4-4:31,11,0,4:4,31:3,4:261.334:326.675,113.385:0.0,0.0:0.0,2.28666e-09,1.0
+chr1	4858328	.	GCTGCTGCTGCT	.	.	.	END=4858339;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:29,23,0,3:4,29:3,3:364.467:366.612,131.36:0.0,0.0:0.0,5.83154e-09,1.0	0/0:40:1.0:4,4:4-4,4-4:30,10,0,0:4,30:NULL:212.965:326.675,113.385:0.0,0.0:0.0,7.88224e-09,1.0
+chr1	4859454	.	CAAACAAACAAA	.	.	.	END=4859465;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.997279:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.94:366.612,131.36:0.0,0.0:1.15188e-38,0.00183885,0.998169	0/0:9:0.96338:3,3:3-3,3-3:8,1,0,0:3,8:NULL:42.1661:326.675,113.385:0.0,0.0:2.92369e-26,0.0150861,0.984943
+chr1	4859713	.	CTCTCTCTCTCTCTCT	.	.	.	END=4859728;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997518:8,8:8-8,8-8:13,12,0,0:8,13:NULL:164.513:366.612,131.36:0.0,0.0:6.90662e-25,0.0017479,0.99826	0/0:26:0.957459:8,8:8-8,8-8:8,16,0,2:8,8:5,1|7,1:195.057:326.675,113.385:0.0,0.0:8.91426e-16,0.0212945,0.978746
+chr1	4861410	.	TTCTTTCTTTCT	.	.	.	END=4861421;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:224.402:366.612,131.36:0.0,0.0:0.0,2.06593e-08,1.0	0/0:23:0.999288:3,3:3-3,3-3:13,7,0,3:3,13:2,3:138.485:326.675,113.385:0.0,0.0:1.7e-44,0.000239742,0.999765
+chr1	4862097	.	ACACACACACACACACAC	.	.	.	END=4862114;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:9,9:9-9,9-9:26,20,0,4:9,26:6,1|7,2|8,1:325.837:366.612,131.36:0.172061,0.172061:0.0,4.50161e-08,1.0	0/0:34:0.988749:9,9:7-9,7-9:17,10,0,6:8,2|9,15:5,1|6,4|7,1:219.231:326.675,113.385:0.631028,0.631028:3.55181e-24,0.0112089,0.988814
+chr1	4862140	.	ACACACACACACAC	ACACACACACACACACAC	.	.	END=4862153;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.475531:7,9:7-7,8-9:16,22,0,5:7,16:8,4|9,1:320.291:366.612,131.36:0.0,0.510837:0.0,2.3204e-33,1.0	0/0:20:0.976578:7,7:7-7,7-7:9,11,0,0:7,9:NULL:141.55:326.675,113.385:0.0,0.0:2.90656e-20,0.0134479,0.986579
+chr1	4864608	.	AAACAAACAAAC	.	.	.	END=4864619;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,10,0,2:3,25:2,2:205.564:366.612,131.36:0.0,0.0:0.0,1.127e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:153.582:326.675,113.385:0.0,0.0:0.0,1.29397e-06,1.0
+chr1	4866501	.	CCAGGCTGGCCTCCAGGCTGGCCTCCAGGCTGGCCT	CCAGGCTGGCCTCCAGGCTGGCCT	.	.	END=4866536;RU=ccaggctggcct;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999145:2,2:2-2,2-2:13,12,0,0:2,13:NULL:158.09:366.612,131.36:0.0,0.0:0.999728,0.000272618,2.5201e-19	0/0:22:0.999134:3,3:3-3,3-3:14,6,0,2:3,14:2,2:130.066:326.675,113.385:0.0,0.0:1.10892e-17,0.000575615,0.99943
+chr1	4867295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4867334;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.102623:22,23:10-23,10-24:0,18,0,14:NULL:5,1|6,2|7,2|8,1|10,2|16,1|17,2|20,2|22,1:279.652:366.612,131.36:2.91557,2.97962:1.37974e-22,0.306397,0.693615	0/0:43:0.943524:20,20:7-21,7-21:9,20,0,11:20,9:7,1|8,3|10,1|12,1|13,1|15,3|19,1:314.66:326.675,113.385:6.33959,6.33959:2.54871e-11,0.028072,0.971984
+chr1	4867339	.	TACATACATACATACA	TACATACATACATACATACA	.	.	END=4867354;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999979:5,5:5-5,5-5:27,21,0,2:4,2|5,25:3,2:323.082:366.612,131.36:0.0,0.0:0.0,4.58403e-08,1.0	0/0:39:1.0:4,4:4-4,4-4:19,17,0,3:4,19:3,3:256.592:326.675,113.385:0.0,0.0:0.0,1.11741e-05,0.999993
+chr1	4870254	.	TATTTATTTATT	.	.	.	END=4870265;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999596:3,3:3-3,3-3:14,14,0,3:3,14:2,3:203.164:366.612,131.36:0.0,0.0:1e-45,0.000216245,0.999788	0/0:27:0.999891:3,3:3-3,3-3:16,8,0,3:3,16:2,3:156.429:326.675,113.385:0.0,0.0:0.0,4.43e-05,0.999956
+chr1	4871522	.	TCCTCCTCCTCC	.	.	.	END=4871533;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:4,4:4-4,4-4:31,29,0,0:4,31:NULL:387.375:366.612,131.36:0.0,0.0:0.0,6.72445e-09,1.0	0/0:47:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:253.255:326.675,113.385:0.0,0.0:0.0,5.23008e-10,1.0
+chr1	4874307	.	GGAAGGAAGGAA	.	.	.	END=4874318;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999255:3,3:3-3,3-3:14,13,0,0:3,14:NULL:179.186:366.612,131.36:0.0,0.0:1e-45,0.000496271,0.999507	0/0:22:0.999929:3,3:3-3,3-3:17,5,0,0:3,17:NULL:113.657:326.675,113.385:0.0,0.0:0.0,3.86341e-05,0.999963
+chr1	4874466	.	AACAACAACAACAAC	AACAACAACAAC	.	.	END=4874480;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:37:0.993994:4,5:4-5,5-5:17,20,0,0:4,3|5,14:NULL:266.538:366.612,131.36:0.398507,0.0:1.51296e-36,0.993994,0.00601875	0/0:20:0.993029:5,5:4-5,4-5:11,8,0,0:5,11:NULL:115.916:326.675,113.385:0.492866,0.492866:1.06517e-32,0.00475677,0.995257
+chr1	4877242	.	TATTTATTTATTTATT	TATT,TATTTATTTATT	.	.	END=4877257;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:6:0.0150407:1,3:1-3,1-3:0,6,0,0:NULL:NULL:53.3083:366.612,131.36:0.825769,0.877677:0.0641034,0.438012,0.498075	0/0:18:0.999635:4,4:4-4,4-4:15,3,0,0:4,15:NULL:86.5963:326.675,113.385:0.0,0.0:3e-45,0.000210023,0.99979
+chr1	4878697	.	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	.	.	END=4878766;RU=ctctt;PERIOD=5;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.98803:13,13:13-13,13-13:10,13,0,11:13,10:2,2|4,1|6,1|8,1|9,2|10,1|11,3:246.043:366.612,131.36:0.0,0.0:0.996172,0.00383706,7.51694e-21	0/0:27:0.869346:14,14:13-14,13-14:6,9,0,11:14,6:2,1|3,2|5,2|7,1|10,1|11,1|12,3:187.457:326.675,113.385:0.495841,0.495841:3.7595e-17,0.0802297,0.919866
+chr1	4878791	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	END=4878822;RU=ctcc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.227777:10,10:3-10,3-10:5,14,0,0:10,5:NULL:149.658:366.612,131.36:3.15514,3.15514:4.32064e-13,0.665501,0.334514	0/0:13:0.385621:8,8:6-8,6-8:3,10,0,0:8,3:NULL:108.263:326.675,113.385:0.592572,0.592572:5.86256e-05,0.414281,0.585739
+chr1	4880388	.	CTTCTTCTTCTT	.	.	.	END=4880399;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99948:4,4:4-4,4-4:15,16,0,0:4,15:NULL:206.169:366.612,131.36:0.0,0.0:0.0,0.000409236,0.999591	0/0:36:1.0:4,4:4-4,4-4:23,13,0,0:4,23:NULL:208.752:326.675,113.385:0.0,0.0:0.0,1.05248e-06,1.0
+chr1	4881181	.	TGTTTTGTTTTGTTT	.	.	.	END=4881195;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:27,27,0,0:3,27:NULL:352.532:366.612,131.36:0.0,0.0:0.0,1.58999e-07,1.0	0/0:21:0.999866:3,3:2-3,2-3:16,4,0,0:3,16:NULL:98.8823:326.675,113.385:0.44763,0.44763:0.0,7.15648e-05,0.999932
+chr1	4882279	.	TTATTATTATTA	.	.	.	END=4882290;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.407704:4,4:3-4,3-4:3,11,0,0:4,3:NULL:117.024:366.612,131.36:0.169767,0.169767:7.928e-10,0.348483,0.65155	0/0:14:0.910161:4,4:4-4,4-4:7,7,0,0:4,7:NULL:89.739:326.675,113.385:0.0,0.0:1.5882e-21,0.056422,0.943661
+chr1	4885247	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATC,TATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=4885286;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.950189:8,9:8-10,9-9:15,17,0,3:8,3|9,12:4,1|6,1|7,1:247.157:366.612,131.36:0.653465,0.0:0.999994,7.2535e-06,3.8647e-26	0/0:34:0.973807:10,10:10-11,10-11:9,15,0,9:10,9:3,2|4,1|6,2|7,2|9,2:249.563:326.675,113.385:0.425627,0.425627:4.41641e-18,0.0157938,0.984241
+chr1	4885324	.	TTAGTTAGTTAGTTAGTTAGTTAG	TTAGTTAGTTAGTTAGTTAG,TTAGTTAGTTAGTTAGTTAGTTAGTTAG	.	.	END=4885347;RU=ttag;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:38:0.874592:5,7:5-7,7-7:18,12,0,7:5,2|7,16:3,4|4,3:251.737:366.612,131.36:0.899738,0.0:6.23911e-39,0.87467,0.125428	0/0:33:0.998726:6,6:5-6,5-6:13,13,0,6:6,13:3,2|5,4:218.947:326.675,113.385:0.40582,0.40582:1.3011e-26,0.000756045,0.999248
+chr1	4890962	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4890997;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.0:8,8:8-8,8-8:19,7,0,7:8,19:2,1|3,4|6,1|7,1:192.509:366.612,131.36:0.0,0.0:0.999993,9.55034e-06,7.84969e-35	0/0:38:1.00001:9,9:9-9,9-9:22,10,0,5:9,22:2,1|3,1|4,1|8,2:219.858:326.675,113.385:0.0990099,0.0990099:0.0,1.1242e-06,1.0
+chr1	4894530	.	GTTGGTTGGTTG	.	.	.	END=4894541;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:23,21,0,2:3,23:2,2:290.005:366.612,131.36:0.0,0.0:0.0,5.67316e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:213.064:326.675,113.385:0.0,0.0:0.0,4.05818e-07,1.0
+chr1	4895853	.	CTCACTCACTCA	.	.	.	END=4895864;RU=ctca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999177:3,3:3-3,3-3:13,11,0,0:3,13:NULL:150.405:366.612,131.36:0.0,0.0:7.8e-44,0.000490639,0.999514	0/0:32:0.999992:3,3:3-3,3-3:18,14,0,0:3,18:NULL:199.106:326.675,113.385:0.0,0.0:0.0,1.80082e-05,0.999985
+chr1	4899661	.	ACACACACACACACAC	ACACACACACACAC	.	.	END=4899676;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.00001:7,7:7-7,7-7:22,19,0,4:7,22:5,1|6,2|7,1:294.528:366.612,131.36:0.0990099,0.0990099:1.0,1.37938e-06,1.61122e-33	0/0:41:0.999948:8,8:8-8,8-8:26,12,0,2:7,2|8,24:6,2:240.928:326.675,113.385:0.0990099,0.0990099:3.6123e-41,5.54085e-05,0.999948
+chr1	4902415	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=4902432;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.881129:9,9:8-10,8-10:7,11,0,2:9,7:6,1|8,1:146.361:366.612,131.36:0.696456,0.696456:1.12057e-12,0.0606104,0.939477	0/0:24:0.99869:9,9:9-12,9-12:14,7,0,2:9,14:7,2:137.093:326.675,113.385:1.27688,1.27688:1.593e-24,0.000449994,0.999553
+chr1	4902708	.	TGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG	.	.	END=4902725;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.413074:7,7:5-7,5-7:3,14,0,2:7,3:5,2:154.668:366.612,131.36:0.634282,0.634282:0.822065,0.178005,7.49676e-08	0/0:16:0.866791:9,9:9-10,9-10:7,8,0,0:9,7:NULL:102.351:326.675,113.385:0.486863,0.486863:2.29488e-12,0.0699126,0.930182
+chr1	4903639	.	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	.	.	END=4903674;RU=tttttg;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.239431:7,7:4-7,4-7:2,10,0,0:7,2:NULL:101.832:366.612,131.36:0.949876,0.949876:3.28881e-07,0.444397,0.555709	0/0:28:0.999917:6,6:6-6,6-6:17,9,0,2:6,17:3,1|5,1:173.895:326.675,113.385:0.0,0.0:0.0,6.41162e-05,0.99994
+chr1	4903855	.	TTTGTTTGTTTG	.	.	.	END=4903866;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:185.345:366.612,131.36:0.0,0.0:0.0,7.09136e-06,0.999994	0/0:24:0.990731:3,3:3-3,3-3:10,14,0,0:3,10:NULL:170.769:326.675,113.385:0.0,0.0:5.87266e-34,0.00569124,0.994324
+chr1	4905039	.	TACATACATACA	.	.	.	END=4905050;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:23,13,0,0:3,23:NULL:208.626:366.612,131.36:0.0,0.0:0.0,6.88669e-07,1.0	0/0:28:1.0:3,3:3-3,3-3:19,6,0,3:3,19:2,3:151.536:326.675,113.385:0.0,0.0:0.0,5.64564e-06,0.999995
+chr1	4905095	.	TGGATGGATGGA	.	.	.	END=4905106;RU=tgga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999923:3,3:3-3,3-3:17,12,0,0:3,17:NULL:174.614:366.612,131.36:0.0,0.0:0.0,4.30267e-05,0.999957	0/0:31:1.0:3,3:3-3,3-3:25,4,0,2:3,25:2,2:148.365:326.675,113.385:0.0,0.0:0.0,8.21081e-08,1.0
+chr1	4909777	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4909828;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.430922:25,27:13-25,13-27:9,7,0,15:25,9:5,1|6,1|7,1|10,1|14,1|15,1|16,1|17,2|19,3|23,1|25,1|27,1:229.804:366.612,131.36:4.01858,5.57861:4.85751e-06,0.999988,1.00647e-05	0/3:37:0.321447:26,36:25-26,25-36:5,15,0,17:25,2|26,3:6,3|11,1|12,2|13,2|14,2|15,1|17,1|20,1|22,1|24,1|25,1|33,1:305.858:326.675,113.385:0.284901,4.78637:2.06714e-08,0.0110324,0.988992
+chr1	4909833	.	ATGCATGCATGC	.	.	.	END=4909844;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997586:3,3:3-3,3-3:12,13,0,0:3,12:NULL:161.285:366.612,131.36:0.0,0.0:1.12194e-39,0.00116656,0.998838	0/0:33:0.999905:3,3:3-3,3-3:16,17,0,0:3,16:NULL:217.664:326.675,113.385:0.0,0.0:0.0,7.34374e-05,0.999926
+chr1	4914303	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4914366;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.963093:13,13:13-13,13-13:8,20,0,13:13,8:3,1|4,2|5,1|8,1|9,1|10,2|11,1|12,4:314.081:366.612,131.36:0.0,0.0:0.995673,0.00433868,3.36631e-24	0/0:26:0.640366:16,16:15-16,15-16:4,12,0,9:16,4:3,1|5,1|9,1|12,1|13,3|14,1|15,1:192.607:326.675,113.385:0.499779,0.499779:4.19595e-09,0.200213,0.79983
+chr1	4914896	.	GGAGGAGGAGGA	.	.	.	END=4914907;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:21,28,0,0:4,21:NULL:340.103:366.612,131.36:0.0,0.0:0.0,6.01108e-06,0.999995	0/0:23:0.93709:4,4:4-4,4-4:8,15,0,0:4,8:NULL:166.795:326.675,113.385:0.0,0.0:8.34997e-25,0.0488196,0.951257
+chr1	4916037	.	TACATACATACATACA	.	.	.	END=4916052;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:4,4:4-4,4-4:30,25,0,3:4,30:3,3:372.561:366.612,131.36:0.0,0.0:0.0,5.3936e-09,1.0	0/0:48:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,2|4,1:275.235:326.675,113.385:0.0,0.0:0.0,7.53442e-10,1.0
+chr1	4918464	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	.	END=4918491;RU=ggag;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.974661:7,7:7-7,7-7:9,16,0,3:7,9:2,1|3,1|6,1:208.115:366.612,131.36:0.0,0.0:4.71002e-17,0.0165889,0.983445	0/0:23:0.935308:7,7:7-7,7-7:8,15,0,0:7,8:NULL:175.432:326.675,113.385:0.29703,0.29703:2.75131e-15,0.0517317,0.948348
+chr1	4918494	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GA,GAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4918545;RU=ga;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:5:0.00284588:1,9:1-13,1-13:0,5,0,0:NULL:NULL:45.8483:366.612,131.36:4.3402,4.33937:0.395201,0.511789,0.0931213	3/0:28:0.930118:25,26:21-26,21-26:6,14,0,7:25,3|26,3:5,1|8,2|10,2|11,1|21,1:212.74:326.675,113.385:1.98598,1.86701:0.00122754,0.952779,0.0460742
+chr1	4920839	.	TTATTATTATTA	.	.	.	END=4920850;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999195:4,4:2-4,2-4:14,7,0,0:4,14:NULL:119.597:366.612,131.36:0.973726,0.973726:7.7e-44,0.000479133,0.999523	0/0:18:0.998916:4,4:4-4,4-4:13,3,0,2:4,13:3,2:92.8638:326.675,113.385:0.0,0.0:9.477e-41,0.000412151,0.999591
+chr1	4920879	.	TGGCTGGCTGGC	.	.	.	END=4920890;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999941:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.755:366.612,131.36:0.0,0.0:4.2e-44,3.98504e-05,0.999963	0/0:18:0.995248:3,3:3-3,3-3:11,7,0,0:3,11:NULL:106.999:326.675,113.385:0.0,0.0:7.72716e-29,0.00241556,0.997593
+chr1	4920889	.	GCCAGCCAGCCA	.	.	.	END=4920900;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:3,3:3-3,3-3:19,8,0,0:3,19:NULL:148.616:366.612,131.36:0.0,0.0:0.0,9.76148e-06,0.999993	0/0:18:0.995246:3,3:3-3,3-3:11,7,0,0:3,11:NULL:107.018:326.675,113.385:0.0,0.0:3.17835e-37,0.00238722,0.997618
+chr1	4921013	.	ATTTATTTATTT	.	.	.	END=4921024;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.906659:3,3:3-3,3-3:6,20,0,0:3,6:NULL:204.332:366.612,131.36:0.0,0.0:1.3993e-19,0.0448965,0.955176	0/0:18:0.983079:3,3:3-3,3-3:9,9,0,0:3,9:NULL:115.759:326.675,113.385:0.0,0.0:8.49186e-29,0.00831875,0.991703
+chr1	4921202	.	TTCTTCTTCTTC	.	.	.	END=4921213;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999931:4,4:4-4,4-4:17,13,0,0:4,17:NULL:190.356:366.612,131.36:0.0,0.0:0.0,3.68238e-05,0.999964	0/0:16:0.996708:4,4:4-4,4-4:12,4,0,0:4,12:NULL:86.1021:326.675,113.385:0.0,0.0:6.54629e-39,0.00186305,0.998141
+chr1	4921293	.	ATTTATTTATTTATTT	.	.	.	END=4921308;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.983004:4,4:4-4,4-4:9,19,0,3:4,9:3,3:231.443:366.612,131.36:0.0,0.0:1.93803e-24,0.00857355,0.991448	0/0:24:0.996908:4,4:4-4,4-4:12,12,0,0:4,12:NULL:152.192:326.675,113.385:0.0,0.0:2.11086e-32,0.00229159,0.997715
+chr1	4922764	.	AAATAAATAAAT	.	.	.	END=4922775;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999992:3,3:3-3,3-3:18,12,0,0:3,18:NULL:180.383:366.612,131.36:0.0,0.0:0.0,1.69412e-05,0.999986	0/0:25:0.999375:3,3:3-3,3-3:14,9,0,2:3,14:2,2:161.812:326.675,113.385:0.0,0.0:1e-45,0.000258235,0.999743
+chr1	4925089	.	ATTCATTCATTCATTCATTC	.	.	.	END=4925108;RU=attc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.00001:5,5:5-5,5-5:21,26,0,3:5,21:4,3:340.176:366.612,131.36:0.0,0.0:0.0,2.28456e-06,1.0	0/0:51:1.0:5,5:5-5,5-5:25,19,0,7:5,25:3,1|4,5|5,1:319.377:326.675,113.385:0.0,0.0:0.0,7.26226e-08,1.0
+chr1	4930713	.	ATCTATCTATCT	.	.	.	END=4930724;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:30,21,0,4:3,30:2,4:335.927:366.612,131.36:0.0,0.0:0.0,3.17815e-09,1.0	0/0:30:0.999985:3,3:3-3,3-3:18,12,0,0:3,18:NULL:177.406:326.675,113.385:0.0,0.0:0.0,2.00988e-05,0.99998
+chr1	4931717	.	AGAGAGAGAGAGAG	AGAGAGAGAGAG	.	.	END=4931730;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:61:1.0:6,7:6-6,7-7:32,29,0,0:6,13|7,19:NULL:403.191:366.612,131.36:0.0990099,0.0:7.75488e-31,1.0,1.62485e-09	0/0:50:1.00001:7,7:7-8,7-8:22,21,0,6:7,22:5,4|6,2:328.993:326.675,113.385:0.21692,0.21692:1e-45,1.63351e-06,1.0
+chr1	4931731	.	ACACACACACAC	.	.	.	END=4931742;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.00001:6,6:5-7,5-7:20,31,0,5:6,20:5,3|6,2:390.258:366.612,131.36:0.342408,0.342408:0.0,1.01925e-06,1.0	0/0:41:1.0:6,6:6-6,6-6:21,20,0,0:6,21:NULL:267.481:326.675,113.385:0.0,0.0:0.0,8.48974e-06,0.999994
+chr1	4935229	.	CTCCCTCCCTCCCTCC	.	.	.	END=4935244;RU=ctcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:301.091:366.612,131.36:0.0990099,0.0990099:0.0,3.72473e-08,1.0	0/0:35:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:198.54:326.675,113.385:0.0,0.0:0.0,1.37551e-06,1.0
+chr1	4936747	.	AAACAAACAAAC	.	.	.	END=4936758;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:293.25:366.612,131.36:0.0,0.0:0.0,2.01391e-08,1.0	0/0:34:1.00001:3,3:3-3,3-3:22,10,0,2:3,22:2,2:194.602:326.675,113.385:0.0,0.0:0.0,8.6363e-07,1.0
+chr1	4937389	.	AACAACAACAACAACAAC	.	.	.	END=4937406;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:6,6:6-6,6-6:31,15,0,2:6,31:5,2:276.512:366.612,131.36:0.0,0.0:0.0,3.35845e-09,1.0	0/0:45:1.0:6,6:6-6,6-6:25,13,0,6:6,25:4,2|5,4:264.154:326.675,113.385:0.0,0.0:0.0,9.31293e-08,1.0
+chr1	4938098	.	AGAAAGAAAGAA	.	.	.	END=4938109;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:218.478:366.612,131.36:0.0,0.0:0.0,2.99825e-06,1.0	0/0:18:0.999394:3,3:3-3,3-3:14,4,0,0:3,14:NULL:92.2743:326.675,113.385:0.0,0.0:1e-45,0.000270359,0.999734
+chr1	4940874	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4940918;RU=aaaac;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.976025:9,9:8-9,8-9:9,14,0,9:9,9:2,1|3,1|4,2|5,2|6,2|8,1:234.928:366.612,131.36:0.46122,0.46122:4.70087e-25,0.0183276,0.98171	0/0:19:0.98792:9,9:9-9,9-9:10,5,0,4:9,10:3,1|5,1|6,1|7,1:119.203:326.675,113.385:0.0,0.0:6.96937e-28,0.00650601,0.993511
+chr1	4941227	.	TTGTTGTTGTTG	.	.	.	END=4941238;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:20,11,0,3:4,20:3,3:202.89:366.612,131.36:0.0,0.0:0.0,4.02136e-06,0.999995	0/0:25:0.999974:4,4:4-4,4-4:18,7,0,0:4,18:NULL:140.213:326.675,113.385:0.0,0.0:0.0,3.12652e-05,0.999971
+chr1	4941826	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4941867;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:48:0.869733:20,21:20-22,20-22:13,22,0,12:20,7|21,4|22,2:6,1|7,1|9,1|13,2|14,1|15,2|18,1|19,2|21,1:379.236:366.612,131.36:0.575281,0.55233:1.04935e-10,0.99145,0.00856707	0/2:38:0.304313:21,26:20-22,20-27:7,17,0,13:20,3|21,4:5,1|6,1|9,2|11,1|15,2|16,1|17,1|18,1|19,1|21,1|26,1:297.187:326.675,113.385:0.393557,2.53527:5.53095e-16,0.00150292,0.998504
+chr1	4943920	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=4943943;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:0.93824:12,12:11-12,11-12:18,32,0,14:11,4|12,14:4,1|5,2|6,2|8,1|9,3|10,3|11,2:491.696:366.612,131.36:0.460582,0.460582:1.00657e-17,0.0617049,0.938387	0/0:40:0.994255:12,12:9-12,9-12:12,17,0,9:12,12:4,2|5,1|6,1|7,1|8,1|9,3:280.274:326.675,113.385:1.09539,1.09539:4.15738e-18,0.00303051,0.99698
+chr1	4944834	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=4944857;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:6,6:6-6,6-6:24,24,0,10:6,24:2,1|3,3|4,4|5,2:388.368:366.612,131.36:0.0,0.0:0.0,2.95896e-07,1.0	0/0:28:0.99596:6,6:6-6,6-6:11,13,0,4:6,11:2,1|4,2|5,1:196.374:326.675,113.385:0.0,0.0:9.78336e-31,0.00239827,0.997609
+chr1	4946471	.	ATAACATATAACATATAACAT	.	.	.	END=4946491;RU=ataacat;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:25,20,0,0:3,25:NULL:283.248:366.612,131.36:0.0,0.0:0.0,3.02506e-07,1.0	0/0:23:0.999471:3,3:3-3,3-3:14,7,0,2:3,14:2,2:133.637:326.675,113.385:0.0,0.0:2.875e-42,0.000263905,0.999736
+chr1	4957150	.	AAACAAACAAAC	.	.	.	END=4957161;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:33,12,0,2:3,33:2,2:253.018:366.612,131.36:0.0,0.0:0.0,3.93596e-10,1.0	0/0:30:1.0:3,3:3-3,3-3:25,5,0,0:3,25:NULL:146.34:326.675,113.385:0.0,0.0:0.0,1.3194e-07,1.0
+chr1	4958201	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=4958218;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:33,9,0,0:3,33:NULL:219.278:366.612,131.36:0.0,0.0:0.0,5.27952e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:28,4,0,0:3,28:NULL:148.516:326.675,113.385:0.0,0.0:0.0,1.95092e-08,1.0
+chr1	4960946	.	ACACACACACACACACACACACAC	.	.	.	END=4960969;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.998459:12,12:12-13,12-13:14,14,0,5:12,14:5,2|9,2|11,1:228.619:366.612,131.36:0.19802,0.19802:9.682e-23,0.000546971,0.999454	0/0:29:0.991119:12,12:10-12,10-12:11,11,0,5:12,11:4,1|5,3|10,1:182.992:326.675,113.385:0.788731,0.788731:3.74833e-18,0.0052448,0.994768
+chr1	4967461	.	GGTGGTGGTGGT	.	.	.	END=4967472;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:4-4,4-4:30,22,0,2:4,30:3,2:335.899:366.612,131.36:0.0,0.0:0.0,5.93903e-09,1.0	0/0:38:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:231.014:326.675,113.385:0.0,0.0:0.0,2.10865e-06,1.0
+chr1	4967521	.	CTTGCTTGCTTG	.	.	.	END=4967532;RU=cttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:33,16,0,0:3,33:NULL:276.484:366.612,131.36:0.0990099,0.0990099:0.0,7.17683e-10,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:210.541:326.675,113.385:0.0,0.0:0.0,1.61021e-06,1.0
+chr1	4976938	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4976965;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:47:0.0489368:27,27:25-29,25-29:0,17,0,29:NULL:5,2|6,2|7,3|9,2|10,1|11,1|12,1|13,3|14,2|15,1|17,3|20,1|21,2|23,2|24,1|26,1|27,1:379.606:366.612,131.36:0.896245,0.896245:0.0,0.0,1.0	0/1:64:0.794639:14,15:14-14,14-15:35,14,0,15:13,2|14,31|15,2:5,2|6,1|7,3|8,4|9,1|11,2|12,1|15,1:416.39:326.675,113.385:0.0,0.498798:1.45964e-38,2.05051e-08,1.0
+chr1	4977099	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4977144;RU=ag;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0233624:22,22:21-26,21-26:0,9,0,9:NULL:6,1|8,1|11,1|12,2|13,2|18,1|22,1:149.084:366.612,131.36:1.98761,1.98761:0.11419,0.539167,0.346797	0/2:23:0.467761:23,24:22-24,22-24:8,11,0,4:22,2|23,4|24,2:6,1|10,1|13,1|21,1:180.98:326.675,113.385:0.479355,0.832743:0.00041485,0.339338,0.660268
+chr1	4977990	.	TCATCATCATCATCA	.	.	.	END=4978004;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999972:5,5:4-5,4-5:30,19,0,4:4,2|5,28:4,4:338.446:366.612,131.36:0.195027,0.195027:0.0,2.72889e-05,0.999972	0/0:31:0.999902:5,5:5-5,5-5:17,12,0,2:5,17:4,2:199.785:326.675,113.385:0.0,0.0:0.0,6.39382e-05,0.99994
+chr1	4983563	.	CATCATCATCAT	.	.	.	END=4983574;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:4,4:4-4,4-4:30,26,0,2:4,30:3,2:372.273:366.612,131.36:0.0,0.0:0.0,5.35047e-09,1.0	0/0:43:1.0:4,4:4-4,4-4:26,14,0,3:4,26:3,3:252.485:326.675,113.385:0.0,0.0:0.0,5.93857e-08,1.0
+chr1	4985196	.	TTTGTTTGTTTG	.	.	.	END=4985207;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:3,3:3-3,3-3:19,5,0,0:3,19:NULL:117.877:366.612,131.36:0.0,0.0:0.0,7.5934e-06,0.999994	0/0:44:1.0:3,3:3-3,3-3:30,11,0,3:3,30:2,3:240.878:326.675,113.385:0.0,0.0:0.0,2.65166e-09,1.0
+chr1	4996877	.	TATATATATATATATATA	TATATATATATATA	.	.	END=4996894;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.447467:7,7:5-7,5-7:4,19,0,0:7,4:NULL:192.185:366.612,131.36:0.658248,0.658248:0.876695,0.123405,3.28883e-09	0/0:15:0.909:9,9:5-9,5-9:8,6,0,0:9,8:NULL:85.502:326.675,113.385:1.94745,1.94745:2.03074e-09,0.0722748,0.92782
+chr1	4998367	.	CTCCCTCCCTCC	.	.	.	END=4998378;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:127.455:366.612,131.36:0.0,0.0:0.0,8.23697e-06,0.999994	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:148.076:326.675,113.385:0.0,0.0:0.0,9.50006e-06,0.999993
+chr1	5001697	.	TTTTGTTTTGTTTTG	.	.	.	END=5001711;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999987:3,3:3-3,3-3:19,21,0,0:3,19:NULL:274.069:366.612,131.36:0.0,0.0:0.0,1.95025e-05,0.99998	0/0:28:0.999795:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.747:326.675,113.385:0.0,0.0:0.0,0.000154956,0.999849
+chr1	5003140	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=5003167;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999859:13,13:13-13,13-13:23,24,0,3:12,2|13,21:8,1|9,1|10,1:344.393:366.612,131.36:0.0,0.0:1.0,1.05659e-06,1.4696e-27	0/0:46:0.998635:14,14:13-14,13-14:20,17,0,8:13,2|14,18:7,1|8,1|9,1|10,1|12,2|13,2:305.347:326.675,113.385:0.19802,0.19802:3.33707e-24,0.00138137,0.998625
+chr1	5005661	.	GAGGAGGAGGAG	.	.	.	END=5005672;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992028:4,4:4-4,4-4:11,11,0,0:4,11:NULL:141.326:366.612,131.36:0.0,0.0:1.67609e-36,0.00433231,0.99568	0/0:54:1.0:4,4:4-4,4-4:28,19,0,7:4,28:3,7:339.99:326.675,113.385:0.0,0.0:0.0,1.08848e-08,1.0
+chr1	5007022	.	TTTATTTTATTTTAT	.	.	.	END=5007036;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998728:3,3:3-3,3-3:13,12,0,0:3,13:NULL:164.765:366.612,131.36:0.0,0.0:1.547e-42,0.000819146,0.999187	0/0:20:0.999989:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.73:326.675,113.385:0.0,0.0:0.0,1.56403e-05,0.999986
+chr1	5008480	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=5008511;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999985:7,7:7-7,7-7:18,17,0,7:7,18:2,1|4,5|6,1:280.991:366.612,131.36:0.0,0.0:0.999987,1.30011e-05,1.28651e-33	0/0:43:1.0:8,8:8-8,8-8:20,15,0,8:8,20:3,1|4,3|5,1|6,2|7,1:279.858:326.675,113.385:0.0,0.0:0.0,5.71248e-06,0.999995
+chr1	5011517	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA	.	.	END=5011560;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.781628:21,21:20-21,20-21:10,16,0,16:20,2|21,8:4,1|5,1|6,1|7,2|8,2|11,2|14,1|15,1|16,2|17,1|18,1|19,1:329.553:366.612,131.36:0.35561,0.35561:0.986623,0.0134052,2.41062e-08	0/0:37:0.998362:22,22:22-22,22-22:14,7,0,14:22,14:5,2|8,1|13,2|14,1|17,2|18,2|20,1|21,2|22,1:244.354:326.675,113.385:0.139319,0.139319:5.65472e-23,0.000382178,0.999621
+chr1	5011684	.	AAAACAAAACAAAACAAAAC	.	.	.	END=5011703;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:4,4:4-4,4-4:17,19,0,3:4,17:2,1|3,2:265.456:366.612,131.36:0.0,0.0:0.0,4.14353e-05,0.999963	0/0:29:1.0:4,4:4-4,4-4:19,7,0,3:4,19:3,3:161.314:326.675,113.385:0.0,0.0:0.0,5.98742e-06,0.999995
+chr1	5012007	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=5012062;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.0683737:10,12:1-13,1-13:0,18,0,7:NULL:5,1|6,1|7,2|8,1|12,2:219.863:366.612,131.36:3.69494,2.58175:0.597251,0.37845,0.0244016	0/0:25:0.882252:14,14:14-14,14-14:6,11,0,8:14,6:5,2|8,1|11,3|12,2:186.386:326.675,113.385:0.355334,0.355334:4.35448e-15,0.0746844,0.92541
+chr1	5013650	.	CAGAGCAGAGCAGAGCAGAGCAGAGCAGAG	CAGAGCAGAGCAGAGCAGAGCAGAG	.	.	END=5013679;RU=cagag;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999973:5,5:5-5,5-5:18,12,0,2:5,18:4,2:195.346:366.612,131.36:0.0,0.0:0.999986,1.7778e-05,5.31604e-39	0/0:32:0.925409:6,6:5-6,5-6:19,9,0,4:5,2|6,17:3,2|4,1|5,1:194.947:326.675,113.385:0.442564,0.442564:0.0,0.0746917,0.925404
+chr1	5014848	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5014891;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:0.591369:26,26:25-27,25-27:11,24,0,26:25,3|26,8:5,3|6,1|9,2|10,2|13,2|15,1|16,2|17,2|18,3|20,5|21,1|22,1|24,1:478.783:366.612,131.36:0.515042,0.515042:0.0,0.0,1.0	0/0:61:0.836759:22,22:21-23,21-23:18,23,0,18:21,3|22,12|23,3:6,1|7,1|8,1|9,1|10,2|11,2|14,1|15,1|16,1|17,3|18,1|21,3:450.295:326.675,113.385:0.661665,0.661665:1.00629e-12,0.0123263,0.987699
+chr1	5019542	.	CGCTCGCTCGCT	.	.	.	END=5019553;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:3,3:3-3,3-3:28,33,0,3:3,28:2,3:436.889:366.612,131.36:0.0,0.0:0.0,1.82732e-08,1.0	0/0:57:1.0:3,3:3-3,3-3:37,18,0,2:3,37:2,2:329.618:326.675,113.385:0.0,0.0:0.0,5.87802e-11,1.0
+chr1	5020039	.	GCCAGCCAGCCA	.	.	.	END=5020050;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:81:1.0:3,3:3-3,3-3:50,31,0,0:3,50:NULL:489.516:366.612,131.36:0.0,0.0:0.0,1.08271e-14,1.0	0/0:64:1.0:3,3:3-3,3-3:53,11,0,0:3,53:NULL:310.857:326.675,113.385:0.0,0.0:0.0,1.15808e-15,1.0
+chr1	5022514	.	TTGTTGTTGTTG	.	.	.	END=5022525;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999007:4,4:4-4,4-4:14,13,0,0:4,14:NULL:169.733:366.612,131.36:0.0,0.0:0.0,0.000700097,0.999302	0/0:32:1.00001:4,4:4-4,4-4:21,11,0,0:4,21:NULL:181.785:326.675,113.385:0.0,0.0:0.0,3.66862e-06,1.0
+chr1	5023422	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5023467;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:0.928802:18,18:17-18,17-18:20,29,0,12:17,5|18,15:5,1|6,1|8,1|10,3|11,2|12,1|13,1|14,2:459.163:366.612,131.36:0.36513,0.36513:1.0,0.0,0.0	0/0:71:0.990676:23,23:12-23,12-23:17,30,0,22:22,3|23,14:4,1|6,2|7,3|8,3|9,1|11,2|12,3|13,1|15,1|17,2|21,3:533.46:326.675,113.385:5.35709,5.35709:2.13956e-14,0.00902075,0.991
+chr1	5024078	.	AATAATAATAATAATAATAATAATAATAATAATAATAATAAT	.	.	.	END=5024119;RU=aat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.867285:14,14:14-14,14-14:6,9,0,8:14,6:6,2|8,3|12,1|13,2:167.018:366.612,131.36:0.0,0.0:8.86682e-10,0.0435721,0.956499	0/0:21:0.719744:14,14:12-14,12-14:5,5,0,9:14,5:4,1|5,1|6,2|8,1|9,1|10,1|11,1|13,1:140.5:326.675,113.385:0.765136,0.765136:3.24644e-08,0.164517,0.835557
+chr1	5026610	.	CTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5026631;RU=ct;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:40:0.995281:9,13:9-9,12-13:10,23,0,4:9,8|13,2:4,1|7,1|10,1|12,1:294.328:366.612,131.36:0.0,0.611622:1.05571e-11,1.0,2.1268e-14	0/0:22:0.996622:11,11:11-12,11-12:12,6,0,3:11,12:8,1|10,2:129.641:326.675,113.385:0.284901,0.284901:1.52129e-18,0.00103294,0.998968
+chr1	5030577	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCC,TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=5030644;RU=tccc;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.00122163:1,1:1-1,1-1:0,2,0,0:NULL:NULL:16.7026:366.612,131.36:0.0,0.0:0.157866,0.613891,0.228323	2/2:5:0.0282725:10,10:5-10,5-10:0,0,0,4:NULL:3,1|4,1|7,1|10,1:29.1062:326.675,113.385:2.2931,2.2931:1.0,0.0,0.0
+chr1	5032870	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5032919;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.361478:20,26:20-22,21-26:9,14,0,16:19,2|20,7:4,1|6,2|8,1|11,1|12,1|14,1|15,1|16,1|17,3|21,1|23,2|26,1:304.689:366.612,131.36:0.352008,1.57945:6.5147e-08,1.0,5.81691e-23	0/0:37:0.652812:25,25:23-28,23-28:5,4,0,25:25,5:4,1|6,2|8,1|9,1|10,1|11,2|12,2|13,1|14,1|16,1|17,2|19,1|20,1|21,4|22,2|24,1|25,1:258.187:326.675,113.385:1.7121,1.7121:2.82121e-14,0.0563919,0.943694
+chr1	5034803	.	ACCCACCCACCC	.	.	.	END=5034814;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994095:3,3:3-3,3-3:11,14,0,0:3,11:NULL:173.794:366.612,131.36:0.0,0.0:1.24098e-32,0.00394774,0.996065	0/0:23:0.920083:3,3:3-3,3-3:7,16,0,0:3,7:NULL:173.165:326.675,113.385:0.19802,0.19802:5.54696e-21,0.0536464,0.946438
+chr1	5042658	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=5042677;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.149815:5,5:1-5,1-5:2,12,0,0:5,2:NULL:118.069:366.612,131.36:1.10262,1.10262:4.18241e-07,0.608055,0.392004	0/0:31:0.999979:5,5:5-5,5-5:19,12,0,0:5,19:NULL:191.35:326.675,113.385:0.0,0.0:0.0,2.86153e-05,0.999972
+chr1	5043950	.	GTTTGTTTGTTTGTTT	.	.	.	END=5043965;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:4,4:4-4,4-4:20,7,0,0:4,20:NULL:141.455:366.612,131.36:0.0,0.0:0.0,8.42021e-06,0.999994	0/0:45:1.00001:4,4:3-4,3-4:22,19,0,3:4,22:2,1|3,2:284.906:326.675,113.385:0.21692,0.21692:0.0,1.11147e-06,1.0
+chr1	5046122	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5046183;RU=ct;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0180503:26,26:26-28,26-28:0,5,0,0:NULL:NULL:44.9841:366.612,131.36:1.02378,1.02378:0.807671,0.182256,0.0101442	0/0:22:0.029794:31,31:28-34,28-34:0,11,0,9:NULL:7,1|10,1|12,1|15,2|20,2|25,1|31,1:172.568:326.675,113.385:1.12192,1.12192:1.72614e-08,0.478179,0.521908
+chr1	5046685	.	GTGGTGGTGGTG	GTGGTGGTGGTGGTG	.	.	END=5046696;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:0.830985:4,5:4-4,4-5:16,40,0,0:4,13|5,3:NULL:431.746:366.612,131.36:0.0,0.489073:2.65866e-29,4.68503e-05,0.999956	0/0:63:1.0:4,4:4-4,4-4:30,32,0,0:4,30:NULL:418.869:326.675,113.385:0.0990099,0.0990099:0.0,1.7048e-08,1.0
+chr1	5047709	.	TATATATATATATA	.	.	.	END=5047722;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997365:7,7:7-7,7-7:12,12,0,0:7,12:NULL:161.03:366.612,131.36:0.0,0.0:7.77904e-19,0.00182557,0.998178	0/0:15:0.984738:7,7:7-9,7-9:10,4,0,0:7,10:NULL:74.9247:326.675,113.385:0.922441,0.922441:4.13136e-16,0.0068031,0.993212
+chr1	5055484	.	TGCTGCTGCTGC	.	.	.	END=5055495;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999749:4,4:4-4,4-4:15,8,0,0:4,15:NULL:135.046:366.612,131.36:0.0,0.0:1.3e-44,0.00018649,0.999818	0/0:29:0.999993:4,4:4-4,4-4:19,10,0,0:4,19:NULL:162.768:326.675,113.385:0.0,0.0:0.0,1.46827e-05,0.999986
+chr1	5064770	.	GGCTGGCTGGCT	.	.	.	END=5064781;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.997253:3,3:3-3,3-3:11,9,0,3:3,11:2,2|3,1:146.383:366.612,131.36:0.0,0.0:2.5e-44,0.000676736,0.999325	0/0:31:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:194.449:326.675,113.385:0.0,0.0:0.0,4.37869e-05,0.999957
+chr1	5066467	.	TTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCT	TTTCCTTTTCCT	.	.	END=5066502;RU=tttcct;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0731375:2,2:1-2,1-2:0,13,0,0:NULL:NULL:123.218:366.612,131.36:0.486863,0.486863:0.646631,0.326493,0.0269461	0/0:46:1.0:6,6:6-6,6-6:24,16,0,6:6,24:2,1|3,1|4,2|5,2:288.471:326.675,113.385:0.0,0.0:0.0,3.17017e-07,1.0
+chr1	5068662	.	CTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5068679;RU=ct;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.370893:17,18:15-19,15-19:2,17,0,2:17,2:17,1|18,1:185.617:366.612,131.36:1.48337,1.16983:0.0,0.0,1.0	0/0:18:0.94179:9,9:9-9,9-9:7,9,0,2:9,7:7,1|8,1:124.687:326.675,113.385:0.0,0.0:1.14451e-16,0.0254612,0.974589
+chr1	5071017	.	ATTTATTTATTT	.	.	.	END=5071028;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.192677:3,3:1-3,1-3:2,17,0,0:3,2:NULL:160.902:366.612,131.36:0.877453,0.877453:4.0823e-06,0.603197,0.396863	0/0:27:0.999334:3,3:3-3,3-3:14,13,0,0:3,14:NULL:171.023:326.675,113.385:0.0,0.0:1.43838e-40,0.000438231,0.999567
+chr1	5073289	.	CTTCCTTCCTTC	CTTCCTTC	.	.	END=5073300;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0309734:2,2:1-5,1-5:0,11,0,0:NULL:NULL:99.0037:366.612,131.36:0.808615,0.808615:0.0839852,0.432101,0.484103	0/0:27:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:146.637:326.675,113.385:0.0,0.0:0.0,2.01791e-05,0.99998
+chr1	5073332	.	CCCTCTCCCTCTCCCTCTCCCTCT	CCCTCT	.	.	END=5073355;RU=ccctct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0763815:1,1:1-2,1-2:0,14,0,0:NULL:NULL:124.041:366.612,131.36:0.44763,0.44763:0.389388,0.484308,0.126391	1/1:6:0.0145428:1,1:1-1,1-1:0,6,0,0:NULL:NULL:50.552:326.675,113.385:0.0,0.0:0.106345,0.511468,0.38237
+chr1	5074855	.	AAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=5074870;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.991707:6,6:6-6,6-6:11,7,0,0:6,11:NULL:109.741:366.612,131.36:0.0,0.0:0.0,0.00239985,0.997608	0/0:24:0.999781:4,4:4-4,4-4:15,6,0,3:4,15:3,3:138.025:326.675,113.385:0.0,0.0:0.0,8.98934e-05,0.999911
+chr1	5075461	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5075502;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.301404:23,23:19-23,19-23:3,15,0,2:23,3:4,1|11,1:166.597:366.612,131.36:1.03975,1.03975:1.26872e-07,0.221528,0.778513	0/2:36:0.334589:21,42:21-21,21-42:16,14,0,6:20,4|21,12:8,1|13,1|14,1|19,1|20,1|42,1:275.005:326.675,113.385:0.0,10.4015:2.64187e-15,0.000464744,0.999538
+chr1	5076742	.	AAACAAAACAAAACA	.	.	.	END=5076756;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.999445:3,3:3-3,3-3:14,1,0,0:3,14:NULL:64.0851:366.612,131.36:0.0,0.0:1e-45,0.000246601,0.999757	0/0:27:0.976225:3,3:3-3,3-3:9,18,0,0:3,9:NULL:209.489:326.675,113.385:0.0,0.0:4.81057e-29,0.0183779,0.981659
+chr1	5083412	.	GGGCCGGGCCGGGCCGGGCC	.	.	.	END=5083431;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,16,0,6:4,28:2,2|3,4:304.674:366.612,131.36:0.0,0.0:0.0,1.98004e-08,1.0	0/0:33:0.998278:4,4:4-4,4-4:13,18,0,2:4,13:3,2:232.973:326.675,113.385:0.0,0.0:3.013e-42,0.0013592,0.998647
+chr1	5084805	.	ATGTATGTATGT	.	.	.	END=5084816;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:22,20,0,4:3,22:2,4:302.177:366.612,131.36:0.0,0.0:0.0,4.10807e-07,1.0	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.527:326.675,113.385:0.0,0.0:0.0,2.36315e-06,1.0
+chr1	5087801	.	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	.	.	END=5087900;RU=ctttc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.423483:17,17:14-17,14-17:3,25,0,17:17,3:3,1|5,2|6,1|7,3|9,2|10,2|11,1|12,1|14,2|15,1|16,1:371.198:366.612,131.36:0.712734,0.712734:0.949726,0.0503559,3.15541e-13	0/0:44:0.224341:20,20:18-20,18-20:2,15,0,27:20,2:3,3|4,2|5,2|6,1|7,1|8,1|9,2|10,3|11,1|12,5|16,1|17,2|18,3:341.413:326.675,113.385:1.01397,1.01397:6.01713e-05,0.632259,0.367732
+chr1	5087905	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	END=5087943;RU=tgt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.8976:12,12:11-12,11-12:7,13,0,0:12,7:NULL:150.871:366.612,131.36:0.419363,0.419363:0.970468,0.0295872,7.15236e-11	0/0:35:0.999969:13,13:13-13,13-13:18,5,0,11:13,18:4,2|5,1|6,3|8,1|9,1|10,2|12,1:207.319:326.675,113.385:0.0,0.0:2.99767e-37,2.41469e-05,0.999978
+chr1	5089647	.	TTTATTTTATTTTAT	.	.	.	END=5089661;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.973746:3,3:3-3,3-3:9,16,0,0:3,9:NULL:185.953:366.612,131.36:0.19802,0.19802:6.29408e-30,0.0208076,0.979234	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:169.797:326.675,113.385:0.0,0.0:0.0,3.75043e-06,1.0
+chr1	5093894	.	ATTTTATTTTATTTT	.	.	.	END=5093908;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999851:3,3:3-3,3-3:16,7,0,0:3,16:NULL:127.757:366.612,131.36:0.0,0.0:9.1e-44,8.21706e-05,0.999918	0/0:33:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:210.294:326.675,113.385:0.0,0.0:0.0,2.23212e-05,0.999979
+chr1	5094712	.	ATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT	.	.	END=5094743;RU=at;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.17472:19,19:19-22,19-22:2,13,0,0:19,2:NULL:127.165:366.612,131.36:1.09834,1.09834:0.0,0.0,1.0	0/0:24:0.957031:16,16:13-16,13-16:10,12,0,0:16,10:NULL:155.669:326.675,113.385:1.06729,1.06729:4.33584e-11,0.0290692,0.970985
+chr1	5094744	.	ACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=5094759;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:29:0.998935:8,13:8-12,11-13:9,16,0,3:8,3|11,2|13,4:7,1|8,1|12,1:217.207:366.612,131.36:1.52861,0.57834:9.98027e-36,3.49991e-05,0.999964	0/0:30:0.998945:8,8:8-8,8-8:14,12,0,3:8,14:6,2|7,1:191.816:326.675,113.385:0.139319,0.139319:1.03682e-19,0.000471918,0.99953
+chr1	5094790	.	ACACACACACACAC	ACACACACACACACAC	.	.	END=5094803;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999827:8,8:8-9,8-9:17,13,0,0:8,17:NULL:188.976:366.612,131.36:0.21692,0.21692:0.0,8.64003e-05,0.999917	0/0:29:0.999462:7,7:7-7,7-7:14,11,0,4:7,14:6,1|7,3:189.759:326.675,113.385:0.0,0.0:0.0,4.86949e-05,0.999955
+chr1	5097446	.	TTTATTTATTTA	.	.	.	END=5097457;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999863:3,3:3-3,3-3:15,27,0,2:3,15:2,2:320.643:366.612,131.36:0.0,0.0:0.0,9.35685e-05,0.99991	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:155.907:326.675,113.385:0.0,0.0:0.0,4.98331e-06,0.999995
+chr1	5102138	.	ATTTTATTTTATTTTATTTT	.	.	.	END=5102157;RU=atttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999837:4,4:4-4,4-4:16,11,0,0:4,16:NULL:162.302:366.612,131.36:0.0,0.0:0.0,0.000129928,0.999872	0/0:25:0.995369:4,4:4-4,4-4:11,12,0,2:4,11:3,2:170.556:326.675,113.385:0.0,0.0:2.25603e-36,0.00291734,0.997088
+chr1	5106170	.	ATTTATTTATTT	.	.	.	END=5106181;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.993565:3,3:3-3,3-3:11,8,0,0:3,11:NULL:117.455:366.612,131.36:0.0,0.0:1.93051e-36,0.00365293,0.996354	0/0:34:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:207.406:326.675,113.385:0.0,0.0:0.0,1.2672e-05,0.999987
+chr1	5119029	.	TGTATGTATGTA	TGTATGTATGTATGTA	.	.	END=5119040;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0766832:4,4:1-4,1-4:0,20,0,2:NULL:2,2:194.997:366.612,131.36:0.648798,0.648798:0.129674,0.484023,0.38649	0/0:38:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:232.028:326.675,113.385:0.0,0.0:0.0,3.10227e-06,1.0
+chr1	5120108	.	TTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=5120132;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.999993:6,6:6-6,6-6:19,2,0,0:6,19:NULL:97.5754:366.612,131.36:0.0,0.0:0.0,8.88581e-06,0.999994	0/0:29:0.999999:5,5:5-5,5-5:18,8,0,3:5,18:4,3:172.739:326.675,113.385:0.0,0.0:0.0,7.62036e-06,0.999994
+chr1	5122238	.	ATTTTATTTTATTTT	.	.	.	END=5122252;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999732:3,3:3-3,3-3:15,14,0,0:3,15:NULL:187.866:366.612,131.36:0.0,0.0:0.0,0.000213579,0.999788	0/0:31:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:182.449:326.675,113.385:0.0,0.0:0.0,7.64385e-06,0.999994
+chr1	5124506	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT	.	.	END=5124523;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.611604:11,11:10-11,10-11:15,17,0,3:10,3|11,12:5,1|7,1|11,1:250.286:366.612,131.36:0.465241,0.465241:0.0,0.000149354,0.99985	0/0:43:0.999951:9,9:9-9,9-9:17,17,0,8:9,17:5,2|6,1|7,1|8,4:292.165:326.675,113.385:0.139319,0.139319:5.24719e-27,2.88864e-05,0.999972
+chr1	5130293	.	TTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=5130313;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.978104:8,8:8-8,8-8:9,14,0,5:8,9:3,1|5,1|6,1|7,2:202.051:366.612,131.36:0.0,0.0:1.93e-43,0.00381364,0.996195	0/0:32:0.99936:7,7:6-7,6-7:14,11,0,6:7,14:3,2|4,2|5,2:199.703:326.675,113.385:0.195027,0.195027:4.93393e-32,0.000344328,0.999659
+chr1	5131927	.	TTTATTTATTTATTTATTTATTTA	TTTATTTATTTATTTATTTATTTATTTA	.	.	END=5131950;RU=ttta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999788:7,7:7-7,7-7:15,14,0,6:7,15:3,2|5,2|6,2:231.075:366.612,131.36:0.0,0.0:0.0,4.31738e-05,0.999957	0/0:36:1.0:6,6:6-6,6-6:23,8,0,4:6,23:3,3|5,1:195.315:326.675,113.385:0.0,0.0:0.0,5.79974e-07,1.0
+chr1	5136692	.	TAATTAATTAATTAAT	.	.	.	END=5136707;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.998591:4,4:4-4,4-4:14,24,0,0:4,14:NULL:285.967:366.612,131.36:0.0,0.0:1.12765e-38,0.0011807,0.998823	0/0:39:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:241.36:326.675,113.385:0.0,0.0:0.0,4.79915e-06,0.999995
+chr1	5136778	.	TTTGTTTGTTTGTTTG	.	.	.	END=5136793;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.893922:4,4:4-4,4-4:6,20,0,4:4,6:2,1|3,3:240.676:366.612,131.36:0.0990099,0.0990099:8.65602e-21,0.0682427,0.931854	0/0:44:1.0:4,4:3-4,3-4:23,16,0,4:4,23:3,4:265.691:326.675,113.385:0.169767,0.169767:0.0,3.97615e-07,1.0
+chr1	5137285	.	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAA	.	.	.	END=5137324;RU=aacaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.984495:8,8:8-8,8-8:11,22,0,5:8,11:3,1|5,3|6,1:288.126:366.612,131.36:0.29703,0.29703:2.79445e-37,0.0136302,0.9864	0/0:49:0.999985:8,8:7-8,7-8:18,19,0,11:8,18:3,2|4,1|5,3|6,2|7,3:330.796:326.675,113.385:0.311527,0.311527:0.0,2.48916e-05,0.999978
+chr1	5138729	.	AAATAAATAAAT	.	.	.	END=5138740;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999729:3,3:3-3,3-3:15,14,0,3:3,15:2,3:203.069:366.612,131.36:0.0,0.0:0.0,0.00013237,0.999871	0/0:26:0.999945:3,3:3-3,3-3:17,7,0,2:3,17:2,2:140.376:326.675,113.385:0.0,0.0:0.0,2.30953e-05,0.999979
+chr1	5139656	.	CACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5139691;RU=ca;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:27:0.833584:22,23:21-23,21-23:5,7,0,14:22,3|23,2:5,2|6,1|7,2|8,1|12,1|15,1|17,2|19,2|20,1|23,1:203.602:366.612,131.36:0.505823,0.613702:0.0,0.0,1.0	0/0:33:0.408681:18,18:17-19,17-19:15,9,0,8:17,2|18,10|19,3:8,1|9,1|10,1|12,3|14,1|17,1:223.782:326.675,113.385:0.646679,0.646679:6.46431e-13,0.00452802,0.995484
+chr1	5144394	.	TAAATAAATAAA	.	.	.	END=5144405;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99998:3,3:3-3,3-3:19,8,0,0:3,19:NULL:149.522:366.612,131.36:0.0,0.0:0.0,1.52514e-05,0.999986	0/0:36:1.0:3,3:3-3,3-3:25,9,0,2:3,25:2,2:191.591:326.675,113.385:0.0,0.0:0.0,1.22971e-07,1.0
+chr1	5144427	.	AAAAGAAAAGAAAAG	.	.	.	END=5144441;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.113:366.612,131.36:0.0,0.0:0.0,1.0044e-05,0.999993	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:164.921:326.675,113.385:0.0,0.0:0.0,7.35247e-07,1.0
+chr1	5146387	.	CTCTCTCTCTCTCT	.	.	.	END=5146400;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.919069:7,7:7-7,7-7:7,13,0,0:7,7:NULL:143.578:366.612,131.36:0.0,0.0:5.6896e-14,0.0473101,0.952768	0/0:21:0.966795:7,7:7-7,7-7:9,12,0,0:7,9:NULL:144.35:326.675,113.385:0.29703,0.29703:2.06253e-17,0.0224026,0.977639
+chr1	5151445	.	TTGTTGTTGTTG	.	.	.	END=5151456;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:25,16,0,0:4,25:NULL:244.901:366.612,131.36:0.0,0.0:0.0,3.24408e-07,1.0	0/0:37:0.999896:4,4:4-4,4-4:16,17,0,4:4,16:3,4:250.819:326.675,113.385:0.0,0.0:0.0,7.1918e-05,0.999932
+chr1	5152296	.	AAGTCAAGTCAAGTC	.	.	.	END=5152310;RU=aagtc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999903:3,3:3-3,3-3:17,21,0,0:3,17:NULL:265.343:366.612,131.36:0.0,0.0:0.0,9.4407e-05,0.999909	0/0:34:1.0:3,3:3-3,3-3:25,7,0,2:3,25:2,2:180.137:326.675,113.385:0.0,0.0:0.0,1.04653e-07,1.0
+chr1	5155085	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=5155102;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999279:6,6:5-6,5-6:26,17,0,3:5,2|6,24:5,3:300.68:366.612,131.36:0.298675,0.298675:0.0,0.000723085,0.999279	0/1:28:0.300237:6,7:6-6,6-8:15,10,0,3:6,15:5,2|7,1:186.515:326.675,113.385:0.0,0.859278:0.0,3.67236e-08,1.0
+chr1	5162575	.	TCCCCCTCCCCCTCCCCC	.	.	.	END=5162592;RU=tccccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:237.625:366.612,131.36:0.0,0.0:0.0,7.16308e-06,0.999994	0/0:25:0.99991:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.329:326.675,113.385:0.0,0.0:0.0,5.99108e-05,0.999941
+chr1	5163622	.	TCTCTCTCTCTCTCTC	TCTCTCTCTCTCTC	.	.	END=5163637;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.901722:7,7:5-7,5-7:21,18,0,0:5,2|6,2|7,17:NULL:276.157:366.612,131.36:0.847446,0.847446:1.0,2.2429e-06,1.38999e-28	0/0:35:0.988585:8,8:8-9,8-9:23,10,0,2:8,21|9,2:4,1|7,1:212.43:326.675,113.385:0.425627,0.425627:0.0,8.37333e-07,1.0
+chr1	5164581	.	TGTTTTGTTTTGTTT	.	.	.	END=5164595;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.995517:3,3:3-3,3-3:12,15,0,0:3,12:NULL:184.023:366.612,131.36:0.0,0.0:7.00488e-37,0.0035241,0.996483	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:213.3:326.675,113.385:0.0,0.0:0.0,7.12203e-08,1.0
+chr1	5170810	.	CCACCACCACCA	.	.	.	END=5170821;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:226.062:366.612,131.36:0.0,0.0:0.0,2.6812e-07,1.0	0/0:49:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:326.038:326.675,113.385:0.0,0.0:0.0,7.19001e-07,1.0
+chr1	5173050	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=5173067;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999862:6,6:6-6,6-6:16,15,0,5:6,16:3,1|4,2|5,2:240.565:366.612,131.36:0.0,0.0:0.0,6.14837e-05,0.999941	0/0:26:0.999982:6,6:6-6,6-6:18,8,0,0:6,18:NULL:144.716:326.675,113.385:0.0,0.0:0.0,2.45148e-05,0.999978
+chr1	5173130	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=5173165;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.986903:11,11:4-11,4-11:10,12,0,7:11,10:4,1|5,1|6,1|7,2|10,2:217.158:366.612,131.36:3.47918,3.47918:4.22e-43,0.00497608,0.995039	0/0:22:0.995345:9,9:8-9,8-9:11,7,0,3:9,11:4,1|8,2:133.298:326.675,113.385:0.298675,0.298675:2.13587e-23,0.0021916,0.997814
+chr1	5181851	.	TAAATAAATAAA	.	.	.	END=5181862;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.998314:3,3:3-4,3-4:13,21,0,0:3,13:NULL:237.575:366.612,131.36:0.442564,0.442564:7.37232e-40,0.00129224,0.99871	0/0:22:0.999774:3,3:3-3,3-3:15,5,0,2:3,15:2,2:116.435:326.675,113.385:0.0,0.0:0.0,8.72359e-05,0.999917
+chr1	5195638	.	GGGTGGGTGGGT	.	.	.	END=5195649;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.976028:3,3:3-3,3-3:9,19,0,0:3,9:NULL:204.429:366.612,131.36:0.0990099,0.0990099:2.21323e-26,0.0157165,0.984315	0/0:28:0.988988:3,3:3-3,3-3:10,18,0,0:3,10:NULL:206.144:326.675,113.385:0.0,0.0:1.91723e-29,0.00707587,0.992941
+chr1	5199281	.	AACAACAACAACAACAACAAC	AAC	.	.	END=5199301;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:44:1.00001:7,7:7-7,7-7:22,18,0,4:7,22:3,1|4,1|5,1|6,1:283.57:326.675,113.385:0.0,0.0:0.0,1.18639e-06,1.0
+chr1	5199415	.	TCAATTCAATTCAAT	TCAAT	.	.	END=5199429;RU=tcaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:173.551:326.675,113.385:0.0,0.0:0.0,7.79094e-07,1.0
+chr1	5203454	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5203499;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:19:0.616492:27,27:27-28,27-28:5,10,0,3:27,5:12,1|16,1|20,1:142.65:366.612,131.36:0.475866,0.475866:0.0,0.0,1.0	0/1:53:0.990147:23,24:8-23,8-24:16,16,0,20:21,2|22,3|23,9|24,2:4,3|6,3|7,1|8,2|9,2|11,1|13,1|15,2|16,1|19,1|20,2|24,1:398.603:326.675,113.385:6.28355,6.4573:3.53341e-14,0.00125951,0.998746
+chr1	5204415	.	AAAACAAAACAAAAC	.	.	.	END=5204429;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,22,0,0:3,24:NULL:289.691:366.612,131.36:0.0,0.0:0.0,6.84593e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:207.813:326.675,113.385:0.0,0.0:0.0,1.32214e-06,1.0
+chr1	5206150	.	TATTATTATTAT	.	.	.	END=5206161;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:24,19,0,2:4,24:3,2:280.676:366.612,131.36:0.0,0.0:0.0,4.49774e-07,1.0	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:179.209:326.675,113.385:0.0,0.0:0.0,5.83942e-06,0.999995
+chr1	5209488	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=5209507;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:5,5:5-5,5-5:24,25,0,3:5,24:4,1|5,2:342.299:366.612,131.36:0.0,0.0:0.0,2.93501e-07,1.0	0/0:50:1.0:5,5:5-5,5-5:29,17,0,4:5,29:2,2|3,1|4,1:305.847:326.675,113.385:0.0,0.0:0.0,1.4108e-08,1.0
+chr1	5212542	.	AATAAATAAATA	.	.	.	END=5212553;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:29,21,0,0:3,29:NULL:302.188:366.612,131.36:0.0,0.0:0.0,6.61937e-09,1.0	0/0:30:0.999534:3,3:3-3,3-3:14,16,0,0:3,14:NULL:200.165:326.675,113.385:0.0,0.0:5e-44,0.000297945,0.999705
+chr1	5214463	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5214514;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.179791:38,38:22-39,22-39:2,16,0,22:38,2:7,2|8,1|10,1|12,1|13,1|19,1|20,1|21,1|22,3|24,2|25,1|27,1|28,1|29,1|30,1|33,1|35,1|37,1:332.766:366.612,131.36:8.03867,8.03867:0.0,0.00525894,0.994754	0/0:55:0.816593:26,26:22-26,22-26:8,24,0,22:25,2|26,6:5,2|6,1|8,1|10,2|12,2|14,2|15,1|16,1|17,2|20,1|21,3|22,1|23,1|24,1|26,1:439.895:326.675,113.385:1.52231,1.52231:7.61869e-14,0.109333,0.890764
+chr1	5214858	.	ACAAACAAACAAACAAACAAACAA	ACAAACAAACAAACAAACAAACAAACAA	.	.	END=5214881;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999981:7,7:7-7,7-7:18,16,0,6:7,18:4,1|5,1|6,4:263.817:366.612,131.36:0.0,0.0:0.0,1.96046e-06,1.0	0/0:44:1.0:6,6:6-6,6-6:32,6,0,6:6,32:3,1|4,2|5,3:227.028:326.675,113.385:0.0,0.0:0.0,7.81639e-10,1.0
+chr1	5215016	.	AAACAAACAAACAAAC	.	.	.	END=5215031;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999931:4,4:4-4,4-4:17,22,0,3:4,17:3,3:296.386:366.612,131.36:0.0,0.0:0.0,6.34682e-05,0.99994	0/0:34:0.999896:4,4:4-4,4-4:16,14,0,4:4,16:3,4:222.896:326.675,113.385:0.0,0.0:0.0,5.2001e-05,0.999949
+chr1	5215414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=5215441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.0337407:6,6:6-8,6-8:0,4,0,0:NULL:NULL:33.8497:366.612,131.36:0.950082,0.950082:0.12587,0.46186,0.412459	0/0:36:0.999947:7,7:6-7,6-7:17,11,0,7:7,17:3,1|5,2|6,4:222.254:326.675,113.385:0.35561,0.35561:0.0,2.25514e-05,0.999979
+chr1	5215633	.	GTTTTTTTGTTTTTTTGTTTTTTT	GTTTTTTT	.	.	END=5215656;RU=gttttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0699749:1,1:1-1,1-1:0,8,0,0:NULL:NULL:71.2298:366.612,131.36:0.0,0.0:0.161111,0.542501,0.296497	0/0:19:0.929627:3,3:3-3,3-3:7,12,0,0:3,7:NULL:137.474:326.675,113.385:0.0,0.0:4.70423e-20,0.051824,0.948258
+chr1	5222650	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5222685;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:37:0.999975:14,18:14-15,15-25:15,18,0,3:14,8|15,2|18,5:8,1|10,1|13,1:265.085:366.612,131.36:1.09602,1.47222:1.35483e-06,1.0,1.7173e-11	0/0:31:0.591313:18,18:7-20,7-20:12,7,0,8:17,3|18,9:5,1|7,2|9,1|11,1|12,1|13,2:186.063:326.675,113.385:3.56991,3.56991:4.53689e-11,0.404719,0.595353
+chr1	5222686	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5222719;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0157724:29,29:15-32,15-32:0,16,0,9:NULL:8,1|9,2|11,1|12,2|15,1|25,1|28,1:217.563:366.612,131.36:7.10125,7.10125:1.02035e-15,0.221213,0.778826	0/0:26:0.988323:17,17:12-17,12-17:10,9,0,6:17,10:6,3|12,1|16,1|17,1:168.324:326.675,113.385:2.15787,2.15787:1.15349e-24,0.00401421,0.995997
+chr1	5223713	.	TTTGTTTGTTTG	.	.	.	END=5223724;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:25,19,0,2:3,25:2,2:291.821:366.612,131.36:0.0,0.0:0.0,7.77745e-08,1.0	0/0:34:0.999719:3,3:3-3,3-3:15,19,0,0:3,15:NULL:235.265:326.675,113.385:0.0,0.0:6e-45,0.000233093,0.999767
+chr1	5224486	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	END=5224521;RU=ttcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.737032:15,15:4-15,4-15:6,15,0,8:15,6:2,1|5,1|8,1|10,1|13,1|14,3:230.197:366.612,131.36:3.75682,3.75682:0.0,0.0851395,0.914956	0/0:25:0.999249:9,9:8-9,8-9:14,10,0,0:9,14:NULL:153.745:326.675,113.385:0.270063,0.270063:5.5024e-40,0.000564618,0.999438
+chr1	5225503	.	TTTATTTATTTATTTATTTA	.	.	.	END=5225522;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.00001:5,5:5-5,5-5:22,25,0,5:5,22:2,2|3,2|4,1:355.417:366.612,131.36:0.0,0.0:0.0,2.06382e-06,1.0	0/0:41:0.999991:5,5:5-5,5-5:18,15,0,8:5,18:2,1|3,3|4,4:267.129:326.675,113.385:0.0,0.0:0.0,1.16671e-05,0.999987
+chr1	5225865	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5225896;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:80:0.347947:22,29:21-22,21-29:15,34,0,28:21,6|22,9:5,2|6,1|8,1|9,1|10,1|11,1|12,1|13,2|14,4|15,1|16,3|17,3|18,1|19,1|21,4|29,1:621.824:366.612,131.36:0.236383,3.71225:0.0,0.0,1.0	0/0:31:0.378564:16,16:13-16,13-16:8,12,0,9:15,3|16,5:5,1|7,1|8,1|9,1|11,1|12,3|16,1:226.415:326.675,113.385:0.967363,0.967363:9.83265e-13,0.604702,0.395359
+chr1	5228543	.	TTTATTTATTTA	.	.	.	END=5228554;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:28,12,0,4:3,28:2,3|3,1:251.392:366.612,131.36:0.0,0.0:0.0,7.3749e-09,1.0	0/0:32:0.999984:3,3:3-3,3-3:18,14,0,0:3,18:NULL:201.611:326.675,113.385:0.0,0.0:0.0,2.33616e-05,0.999979
+chr1	5232603	.	TAATAATAATAA	.	.	.	END=5232614;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:4,4:4-4,4-4:23,9,0,0:4,23:NULL:168.543:366.612,131.36:0.0,0.0:0.0,1.06949e-06,1.0	0/0:24:1.0:4,4:4-4,4-4:20,4,0,0:4,20:NULL:116.086:326.675,113.385:0.0,0.0:0.0,5.85088e-06,0.999995
+chr1	5237129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5237166;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.813959:19,19:18-19,18-19:7,10,0,2:19,7:7,1|11,1:145.291:366.612,131.36:0.374147,0.374147:2.06632e-09,0.114796,0.885306	0/0:34:0.996205:19,19:10-19,10-19:17,7,0,8:18,2|19,15:10,1|11,1|14,1|15,1|16,1|17,2|18,1:205.591:326.675,113.385:3.76193,3.76193:5.78756e-18,0.00365141,0.99636
+chr1	5237829	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT,TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5237896;RU=ttct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0416806:19,19:14-21,14-21:0,8,0,8:NULL:4,1|5,1|6,2|12,1|14,1|17,1|18,1:130.054:366.612,131.36:1.80051,1.80051:3.71072e-16,0.376297,0.623757	1/1:37:0.762862:18,18:17-18,17-18:5,14,0,17:18,5:5,2|6,2|8,3|9,1|10,2|11,1|12,1|13,1|15,2|16,1|17,1:276.605:326.675,113.385:0.494455,0.494455:4.1147e-18,0.076631,0.923462
+chr1	5248663	.	ACCACCACCACC	.	.	.	END=5248674;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:4,4:4-4,4-4:40,16,0,0:4,40:NULL:299.265:366.612,131.36:0.0,0.0:0.0,8.09204e-12,1.0	0/0:54:1.0:4,4:4-4,4-4:32,18,0,4:4,32:3,4:326.504:326.675,113.385:0.0,0.0:0.0,7.37035e-10,1.0
+chr1	5256153	.	GAGCAAGAGCAAGAGCAA	.	.	.	END=5256170;RU=gagcaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999993:3,3:3-3,3-3:19,8,0,0:3,19:NULL:143.436:366.612,131.36:0.0,0.0:2.84919e-36,1.28151e-05,0.999987	0/0:48:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:269.734:326.675,113.385:0.0,0.0:0.0,9.40678e-10,1.0
+chr1	5258418	.	CACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5258457;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:64:0.49556:22,24:22-22,8-28:24,16,0,20:21,6|22,18:5,1|10,1|11,1|13,1|14,1|15,1|16,5|17,3|18,1|19,1|20,2|22,1|24,1:437.329:366.612,131.36:0.0,6.46634:0.0,4.22087e-09,1.0	0/0:101:1.0:20,20:20-20,20-20:47,24,0,30:19,7|20,38|21,2:4,1|5,2|6,2|7,1|8,1|9,3|10,2|12,1|14,2|15,2|16,3|17,2|18,1|19,5|20,2:681.747:326.675,113.385:0.0990099,0.0990099:0.0,9.9887e-08,1.0
+chr1	5258712	.	GTTTGTTTGTTTGTTTGTTT	.	.	.	END=5258731;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:5,5:2-5,2-5:32,19,0,7:5,32:2,1|3,2|4,4:353.064:366.612,131.36:0.5093,0.5093:0.0,8.45447e-10,1.0	0/0:51:0.999986:5,5:4-5,4-5:31,17,0,3:4,2|5,29:3,1|4,2:311.605:326.675,113.385:0.298675,0.298675:0.0,1.61664e-05,0.999986
+chr1	5259167	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=5259184;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997238:9,9:8-9,8-9:22,12,0,0:8,3|9,19:NULL:205.731:366.612,131.36:0.253975,0.253975:1.4656e-32,0.00277942,0.99723	0/0:36:0.992784:9,9:8-9,8-9:21,12,0,3:8,3|9,18:5,1|7,1|8,1:222.927:326.675,113.385:0.298675,0.298675:1.90519e-30,0.00723947,0.992776
+chr1	5260536	.	AGAGAGAGAGAG	.	.	.	END=5260547;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:24,15,0,3:6,24:4,1|5,2:257.581:366.612,131.36:0.0,0.0:0.0,3.27837e-07,1.0	0/0:41:1.0:6,6:6-6,6-6:27,11,0,2:6,27:4,1|5,1:221.878:326.675,113.385:0.139319,0.139319:0.0,3.43838e-08,1.0
+chr1	5261841	.	ACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCAC	.	.	.	END=5261894;RU=accctgtgaggggagcac;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.989161:3,3:3-3,3-3:12,25,0,3:3,12:2,3:307.882:366.612,131.36:0.19802,0.19802:1.21564e-13,0.0108002,0.989224	0/0:26:0.457035:3,3:1-3,1-3:8,18,0,0:3,8:NULL:212.032:326.675,113.385:0.982146,0.982146:1.46782e-08,0.542026,0.458084
+chr1	5274498	.	CACACACACACACACACACACACACACACA	.	.	.	END=5274527;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.827913:15,15:12-16,12-16:14,11,0,4:14,3|15,11:5,1|10,1|13,2:198.033:366.612,131.36:1.07834,1.07834:8.4421e-11,0.171242,0.828827	0/0:49:0.999387:15,15:14-15,14-15:20,18,0,9:14,2|15,18:4,2|5,2|10,1|11,1|14,3:327.507:326.675,113.385:0.290354,0.290354:1.052e-19,0.000612737,0.999392
+chr1	5275399	.	CCAACCAACCAACCAA	.	.	.	END=5275414;RU=ccaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.992288:4,4:4-4,4-4:10,26,0,2:4,10:3,2:288.018:366.612,131.36:0.29703,0.29703:1.16967e-32,0.00604591,0.99397	0/0:24:0.999116:4,4:3-4,3-4:14,9,0,0:4,14:NULL:137.796:326.675,113.385:0.412766,0.412766:4e-45,0.000609573,0.999393
+chr1	5277383	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5277428;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.898518:12,21:12-21,20-21:11,10,0,7:12,2|20,4|21,5:5,1|7,1|9,1|10,3|14,1:208.996:366.612,131.36:3.65753,0.35561:1.0,3.34413e-09,4.59526e-18	0/0:31:0.947523:23,23:22-23,22-23:11,11,0,8:22,2|23,9:5,1|7,1|8,1|16,2|17,3:221.047:326.675,113.385:0.335467,0.335467:4.2736e-11,0.0337459,0.966317
+chr1	5287020	.	CTTTCTTTCTTT	.	.	.	END=5287031;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999962:3,3:3-3,3-3:18,16,0,0:3,18:NULL:226.214:366.612,131.36:0.0,0.0:0.0,4.26436e-05,0.999957	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:182.96:326.675,113.385:0.0,0.0:0.0,2.75502e-06,1.0
+chr1	5287167	.	CACTCACTCACT	.	.	.	END=5287178;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.997619:3,3:3-3,3-3:13,17,0,0:3,13:NULL:209.212:366.612,131.36:0.0,0.0:2.217e-42,0.00140441,0.998602	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:222.996:326.675,113.385:0.0,0.0:0.0,9.17748e-07,1.0
+chr1	5292757	.	TATTTATTTATTTATT	.	.	.	END=5292772;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:4,4:4-4,4-4:24,28,0,5:4,24:3,5:381.227:366.612,131.36:0.0,0.0:0.0,2.152e-07,1.0	0/0:45:1.0:4,4:4-4,4-4:31,12,0,2:4,31:2,1|3,1:249.227:326.675,113.385:0.0,0.0:0.0,2.36608e-09,1.0
+chr1	5293618	.	ACCCACCCACCC	.	.	.	END=5293629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.286812:3,3:1-4,1-4:2,5,0,0:3,2:NULL:56.0438:366.612,131.36:0.4771,0.4771:6.95321e-07,0.320178,0.679833	0/0:33:0.997083:3,3:3-3,3-3:11,20,0,2:3,11:2,2:235.353:326.675,113.385:0.0,0.0:1.65754e-32,0.00180725,0.9982
+chr1	5296079	.	TCTCTCTCTCTC	TCTCTCTCTC	.	.	END=5296090;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.999768:5,6:5-6,6-6:23,7,0,0:5,6|6,17:NULL:167.987:366.612,131.36:0.323567,0.0:3.67971e-28,0.999766,0.000235612	0/0:41:1.0:6,6:4-6,4-6:24,16,0,0:6,24:NULL:243.658:326.675,113.385:0.339533,0.339533:0.0,1.01115e-06,1.0
+chr1	5297215	.	TTATTATTATTA	.	.	.	END=5297226;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:68:1.0:4,4:4-4,4-4:30,36,0,2:4,30:3,2:473.448:366.612,131.36:0.0,0.0:0.0,3.80989e-08,1.0	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:285.39:326.675,113.385:0.0,0.0:0.0,6.96663e-09,1.0
+chr1	5301831	.	AAAGAAAGAAAG	.	.	.	END=5301842;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,20,0,0:3,29:NULL:294.546:366.612,131.36:0.0,0.0:0.0,7.70578e-09,1.0	0/0:42:1.00001:3,3:3-3,3-3:22,20,0,0:3,22:NULL:269.307:326.675,113.385:0.0,0.0:0.0,2.30349e-06,1.0
+chr1	5303346	.	TTTGTTTGTTTGTTTG	.	.	.	END=5303361;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.997585:4,4:4-4,4-4:13,20,0,0:4,13:NULL:228.538:366.612,131.36:0.0,0.0:1e-42,0.00188801,0.998117	0/0:31:0.999824:4,4:4-4,4-4:15,10,0,6:4,15:3,6:189.096:326.675,113.385:0.0,0.0:0.0,7.15698e-05,0.999932
+chr1	5303465	.	TAGGTAGGTAGG	.	.	.	END=5303476;RU=tagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:179.066:366.612,131.36:0.0,0.0:0.0,4.32502e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:27,5,0,3:3,27:2,3:170.725:326.675,113.385:0.0,0.0:0.0,1.88107e-08,1.0
+chr1	5304109	.	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	.	.	END=5304158;RU=caaag;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.990926:11,11:11-11,11-11:10,24,0,9:11,10:4,2|5,1|7,1|8,3|9,1|10,1:325.961:366.612,131.36:0.0,0.0:4e-45,0.00453009,0.995484	0/0:34:0.999662:10,10:6-10,6-10:16,13,0,4:10,16:2,1|6,2|9,1:221.236:326.675,113.385:1.8278,1.8278:0.0,0.000306716,0.999697
+chr1	5305886	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5305925;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:54:0.338605:20,37:20-20,19-37:16,21,0,16:19,5|20,11:6,1|8,2|10,3|11,1|12,1|13,2|16,2|17,1|18,1|19,1|36,1:415.777:366.612,131.36:0.0,8.43581:1.53622e-12,0.00330418,0.996707	0/1:53:0.357551:20,24:20-20,10-24:17,18,0,14:19,6|20,11:6,1|7,3|8,2|9,2|13,1|14,1|17,1|18,1|20,1|24,1:379.134:326.675,113.385:0.139319,5.17495:3.42354e-19,0.00235956,0.997647
+chr1	5306965	.	ATCATCATCATC	.	.	.	END=5306976;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:29,9,0,0:4,29:NULL:194.503:366.612,131.36:0.0,0.0:0.0,1.60491e-08,1.0	0/0:50:1.0:4,4:4-4,4-4:29,16,0,5:4,29:3,5:297.402:326.675,113.385:0.0,0.0:0.0,8.0037e-09,1.0
+chr1	5312273	.	TCTCTCTCTCTCTCTC	.	.	.	END=5312288;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.987404:8,8:6-8,6-8:26,9,0,0:6,4|7,2|8,20:NULL:212.78:366.612,131.36:0.850448,0.850448:1.5683e-41,0.0126277,0.987401	0/0:31:0.99995:8,8:8-9,8-9:22,4,0,3:7,2|8,20:5,2|6,1:155.316:326.675,113.385:0.39604,0.39604:4.36e-43,6.0267e-05,0.999941
+chr1	5312289	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5312324;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:43:0.868327:17,18:17-17,17-20:13,14,0,15:16,2|17,9|18,2:5,2|9,1|11,2|12,2|15,4|16,4:320.234:366.612,131.36:0.417958,1.14937:0.120619,0.879405,7.83593e-05	0/0:34:0.981324:18,18:17-19,17-19:15,4,0,14:17,3|18,12:5,2|6,1|7,1|9,2|10,2|11,1|14,2|16,1|17,2:221.142:326.675,113.385:0.393557,0.393557:4.0892e-18,0.016289,0.983747
+chr1	5312324	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5312357;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999867:17,17:17-19,17-19:17,19,0,3:17,17:5,1|8,1|11,1:278.5:366.612,131.36:0.507951,0.507951:3.43283e-35,6.11318e-05,0.999941	0/0:33:0.869753:17,17:16-17,16-17:17,9,0,7:16,3|17,14:4,1|8,3|13,1|16,2:218.032:326.675,113.385:0.419363,0.419363:3.86306e-25,0.13016,0.869937
+chr1	5318871	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=5318898;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.960449:19,19:17-19,17-19:13,14,0,7:18,2|19,11:7,1|9,1|10,2|12,1|13,1|15,1:251.315:366.612,131.36:0.628225,0.628225:0.0,0.0,1.0	0/0:38:0.999671:14,14:14-14,14-14:16,10,0,11:14,16:4,1|5,1|7,1|8,1|9,1|11,2|12,2|13,2:246.933:326.675,113.385:0.0,0.0:1.71366e-21,0.00011102,0.999888
+chr1	5327635	.	CTCTTTCCCTCTTTCCCTCTTTCC	CTCTTTCC	.	.	END=5327658;RU=ctctttcc;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.325739:1,1:1-3,1-3:0,19,0,0:NULL:NULL:172.932:366.612,131.36:0.978146,0.978146:0.565034,0.384922,0.0501882	0/0:25:0.985248:3,3:3-3,3-3:10,15,0,0:3,10:NULL:176.475:326.675,113.385:0.19802,0.19802:5.32981e-25,0.013287,0.986741
+chr1	5333023	.	TATATATATATATATA	TATATATATATATATATATATA	.	.	END=5333038;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.441393:11,11:10-13,10-13:9,9,0,0:10,2|11,7:NULL:122.896:366.612,131.36:1.11059,1.11059:1.78662e-29,0.0036561,0.996353	0/0:8:0.802531:8,8:8-8,8-8:6,2,0,0:8,6:NULL:42.6017:326.675,113.385:0.0,0.0:6.33462e-08,0.0949859,0.905114
+chr1	5334011	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5334042;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.702044:19,20:19-21,19-21:7,12,0,13:19,3|20,4:6,2|7,1|8,4|9,1|12,1|13,2|14,2:248.604:366.612,131.36:0.830386,0.473387:0.0,0.0,1.0	0/0:22:0.991203:16,16:16-16,16-16:14,4,0,4:15,2|16,12:5,1|10,1|13,1|15,1:131.76:326.675,113.385:0.139319,0.139319:1.15746e-14,0.00625518,0.99376
+chr1	5337377	.	TTTATTTATTTA	.	.	.	END=5337388;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:237.645:366.612,131.36:0.0,0.0:0.0,6.40429e-07,1.0	0/0:33:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:202.756:326.675,113.385:0.0,0.0:0.0,2.36752e-05,0.999979
+chr1	5340739	.	TATTTATTTATT	.	.	.	END=5340750;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.707:366.612,131.36:0.0,0.0:0.0,1.97523e-05,0.99998	0/0:16:0.983407:3,3:3-3,3-3:9,5,0,2:3,9:2,2:96.8479:326.675,113.385:0.0,0.0:4.01017e-31,0.00686109,0.993158
+chr1	5341947	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	.	END=5341974;RU=aagg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99808:7,7:7-7,7-7:13,15,0,3:7,13:2,1|4,1|6,1:218.78:366.612,131.36:0.0,0.0:7.99043e-36,0.0014034,0.998602	0/0:27:0.979243:7,7:6-7,6-7:9,15,0,2:7,9:6,2:192.077:326.675,113.385:0.442564,0.442564:5.8151e-25,0.0143806,0.985652
+chr1	5357169	.	GGGTGGGTGGGT	.	.	.	END=5357180;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.608255:3,3:3-3,3-3:4,11,0,0:3,4:NULL:112.0:366.612,131.36:0.19802,0.19802:2.62201e-11,0.214101,0.785943	0/0:33:0.984164:3,3:3-3,3-3:9,24,0,0:3,9:NULL:245.497:326.675,113.385:0.0,0.0:2.5687e-24,0.0106184,0.989403
+chr1	5365050	.	CCTCCCTCCCTC	.	.	.	END=5365061;RU=cctc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:31,22,0,0:3,31:NULL:322.918:366.612,131.36:0.0,0.0:0.0,4.07982e-09,1.0	0/0:38:1.0:3,3:3-3,3-3:27,9,0,2:3,27:2,2:205.87:326.675,113.385:0.0,0.0:0.0,1.47401e-08,1.0
+chr1	5368230	.	CTCTTGCGCTCTTGCGCTCTTGCGCTCTTGCG	CTCTTGCGCTCTTGCGCTCTTGCG	.	.	END=5368261;RU=ctcttgcg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.882176:3,3:3-11,3-11:20,27,0,2:3,20:2,1|11,1:362.233:366.612,131.36:3.12646,3.12646:0.882095,0.118006,0.0	0/0:36:0.999916:4,4:4-4,4-4:16,17,0,3:4,16:3,3:243.009:326.675,113.385:0.0,0.0:0.0,8.91984e-05,0.999911
+chr1	5368294	.	CTTGCACTCTTGCACTCTTGCACT	.	.	.	END=5368317;RU=cttgcact;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.997641:3,3:3-3,3-3:14,25,0,0:3,14:NULL:292.044:366.612,131.36:0.0,0.0:2.19494e-38,0.002326,0.997678	0/0:35:0.999965:3,3:3-3,3-3:18,17,0,0:3,18:NULL:235.837:326.675,113.385:0.0,0.0:0.0,4.25038e-05,0.999957
+chr1	5369349	.	GTTTGTTTGTTT	.	.	.	END=5369360;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:19,13,0,0:3,19:NULL:193.077:366.612,131.36:0.0,0.0:0.0,7.50507e-06,0.999994	0/0:21:0.999752:3,3:3-3,3-3:15,4,0,2:3,15:2,2:112.933:326.675,113.385:0.0,0.0:0.0,8.85613e-05,0.999911
+chr1	5369470	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT	.	.	END=5369505;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:17:0.65517:13,13:13-14,13-14:5,11,0,0:13,5:NULL:125.134:366.612,131.36:0.44763,0.44763:1.0,0.0,0.0	1/1:8:0.0133204:12,12:15-19,15-19:0,5,0,0:NULL:NULL:47.5052:326.675,113.385:1.68323,1.68323:0.354018,0.483083,0.162943
+chr1	5374204	.	TTTGTTTGTTTGTTTG	.	.	.	END=5374219;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999829:4,4:3-4,3-4:16,13,0,0:4,16:NULL:181.117:366.612,131.36:0.390807,0.390807:0.0,0.000140681,0.999864	0/0:21:0.999914:4,4:4-4,4-4:17,4,0,0:4,17:NULL:104.508:326.675,113.385:0.0,0.0:0.0,5.65094e-05,0.999947
+chr1	5380595	.	ACACACACACAC	.	.	.	END=5380606;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.995403:6,6:6-6,6-6:11,12,0,0:6,11:NULL:153.893:366.612,131.36:0.0,0.0:6.47033e-27,0.00291211,0.997095	0/0:36:1.0:6,6:6-6,6-6:23,13,0,0:6,23:NULL:210.926:326.675,113.385:0.0,0.0:0.0,8.84609e-07,1.0
+chr1	5380856	.	TCTGTCTGTCTG	.	.	.	END=5380867;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:33,15,0,0:3,33:NULL:268.978:366.612,131.36:0.0,0.0:0.0,8.82469e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:30,12,0,2:3,30:2,2:243.845:326.675,113.385:0.0,0.0:0.0,3.59975e-09,1.0
+chr1	5380890	.	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5380943;RU=ca;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:55:0.293781:21,25:21-21,21-28:16,16,0,23:20,2|21,14:7,2|8,1|9,2|11,1|12,2|13,1|14,2|16,1|17,1|18,1|19,2|20,4|21,1|23,1|25,1:422.02:366.612,131.36:0.0,1.90161:0.574979,0.425105,0.0	0/0:43:0.937524:27,27:18-27,18-27:8,15,0,18:27,8:7,1|9,1|11,2|12,1|13,1|14,1|17,2|18,1|22,3|23,1|25,3|26,1:317.864:326.675,113.385:4.08564,4.08564:5.81294e-08,0.0327406,0.967321
+chr1	5382870	.	GAGGAAGAGGAAGAGGAA	.	.	.	END=5382887;RU=gaggaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.00001:3,3:3-3,3-3:21,18,0,6:3,21:2,6:284.486:366.612,131.36:0.0,0.0:0.0,1.09993e-06,1.0	0/0:34:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:197.584:326.675,113.385:0.0,0.0:0.0,2.89385e-06,1.0
+chr1	5384698	.	AGAAAGAAAGAAAGAA	.	.	.	END=5384713;RU=agaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.951299:4,4:4-4,4-4:8,1,0,0:4,8:NULL:42.0356:366.612,131.36:0.0,0.0:8.24126e-27,0.0253717,0.974677	0/0:13:0.994208:4,4:3-4,3-4:11,1,0,0:4,11:NULL:52.2596:326.675,113.385:0.452422,0.452422:1.09039e-36,0.00304955,0.996958
+chr1	5384783	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5384850;RU=ga;PERIOD=2;REF=34.0;EXPTHRESH=34	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0170297:37,37:25-38,25-38:0,6,0,7:NULL:5,1|15,1|17,1|18,1|21,1|25,1|37,1:109.943:366.612,131.36:4.88194,4.88194:9.74187e-08,0.688895,0.311118	1/1:10:0.00722649:26,26:24-35,24-35:0,3,0,4:NULL:5,1|8,1|13,1|15,1:59.5948:326.675,113.385:2.9505,2.9505:0.523716,0.401562,0.0748556
+chr1	5384864	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA,AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	END=5384923;RU=agaa;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:24:0.811644:14,14:14-14,14-14:5,12,0,7:14,5:5,1|7,2|10,2|13,1|14,1:181.954:366.612,131.36:0.0,0.0:0.884619,0.115484,8.42783e-10	1/0:18:0.995891:13,15:13-15,15-15:7,6,0,5:13,2|15,5:7,1|9,1|12,2|13,1:128.201:326.675,113.385:0.825531,0.0:1.40358e-11,0.996498,0.00350955
+chr1	5390035	.	CCTCCTCCTCCT	.	.	.	END=5390046;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:30,20,0,0:4,30:NULL:303.92:366.612,131.36:0.0,0.0:0.0,1.00316e-08,1.0	0/0:42:1.0:4,4:3-4,3-4:25,13,0,3:4,25:3,3:233.407:326.675,113.385:0.21692,0.21692:0.0,8.32903e-08,1.0
+chr1	5391563	.	TTTCTTTCTTTC	.	.	.	END=5391574;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:20,19,0,3:3,20:2,3:279.261:366.612,131.36:0.0,0.0:0.0,3.85061e-06,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.858:326.675,113.385:0.0,0.0:0.0,2.44321e-06,1.0
+chr1	5393656	.	TTTATTTATTTA	.	.	.	END=5393667;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:212.9:366.612,131.36:0.0,0.0:0.0,3.37619e-07,1.0	0/0:22:0.99984:3,3:3-3,3-3:16,6,0,0:3,16:NULL:119.896:326.675,113.385:0.0,0.0:0.0,8.31027e-05,0.999918
+chr1	5400536	.	GGGGTGGGGGTGGGGGTG	.	.	.	END=5400553;RU=ggggtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.952146:3,3:2-3,2-3:8,22,0,2:3,8:2,2:250.206:366.612,131.36:0.309,0.309:3.00685e-21,0.0377962,0.962271	0/0:22:0.986756:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.634:326.675,113.385:0.0,0.0:5.56677e-27,0.00952345,0.990499
+chr1	5400652	.	TAAATAAATAAATAAA	.	.	.	END=5400667;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999912:4,4:4-4,4-4:18,18,0,0:4,18:NULL:240.227:366.612,131.36:0.0,0.0:0.0,8.34338e-05,0.999918	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:169.93:326.675,113.385:0.0,0.0:0.0,2.37959e-06,1.0
+chr1	5401591	.	CAAACAAACAAACAAACAAA	.	.	.	END=5401610;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:20,21,0,2:5,20:3,1|4,1:287.227:366.612,131.36:0.0,0.0:0.0,1.04435e-05,0.999993	0/0:34:0.998896:5,5:4-5,4-5:15,18,0,0:5,15:NULL:226.268:326.675,113.385:0.284901,0.284901:5.5e-44,0.00102301,0.998982
+chr1	5407272	.	AATAAATAAATAAATA	.	.	.	END=5407287;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:33,17,0,2:4,33:3,2:299.722:366.612,131.36:0.0,0.0:0.0,6.38711e-10,1.0	0/0:56:1.0:4,4:4-4,4-4:32,20,0,4:4,32:2,2|3,1|4,1:340.155:326.675,113.385:0.0,0.0:0.0,1.50266e-09,1.0
+chr1	5411524	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5411557;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:0.878383:17,17:12-17,12-17:26,17,0,21:16,8|17,18:5,2|7,3|9,2|10,2|12,4|13,4|15,3|16,1:447.231:366.612,131.36:1.11306,1.11306:1.04022e-17,0.121721,0.878381	0/0:56:0.900944:17,17:16-17,16-17:21,16,0,19:16,6|17,15:4,1|5,3|6,1|9,1|10,4|11,1|12,2|13,1|14,2|15,3:398.882:326.675,113.385:0.437216,0.437216:2.70896e-15,0.0991223,0.900982
+chr1	5412318	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=5412335;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.340536:9,9:7-10,7-10:16,7,0,0:7,2|9,12|10,2:NULL:147.298:366.612,131.36:1.18233,1.18233:5.7347e-20,0.61885,0.381204	0/0:22:0.999588:9,9:9-9,9-9:15,5,0,2:9,15:7,2:121.002:326.675,113.385:0.0,0.0:1.725e-24,0.000183454,0.999819
+chr1	5412585	.	GCAGGCAGGCAG	.	.	.	END=5412596;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:29,11,0,2:3,29:2,2:231.295:366.612,131.36:0.0,0.0:0.0,5.35748e-09,1.0	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:141.585:326.675,113.385:0.0,0.0:0.0,5.03885e-06,0.999995
+chr1	5414201	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5414252;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.277101:22,30:21-22,20-32:13,10,0,12:20,3|21,2|22,8:5,1|9,2|10,1|11,1|13,1|14,2|16,1|17,1|21,1|29,1:264.281:366.612,131.36:0.19802,4.38695:0.000455048,0.999546,6.6337e-28	0/0:27:0.799191:26,26:26-26,26-26:6,5,0,16:26,6:4,1|5,2|8,1|11,1|13,1|15,1|16,2|17,1|18,1|20,1|21,1|22,1|25,2:200.894:326.675,113.385:0.0,0.0:2.87718e-07,0.0580028,0.942083
+chr1	5420026	.	ATGTATGTATGT	.	.	.	END=5420037;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:182.254:366.612,131.36:0.0,0.0:0.0,6.34021e-06,0.999994	0/0:20:0.999831:3,3:3-3,3-3:16,4,0,0:3,16:NULL:101.288:326.675,113.385:0.0,0.0:0.0,9.05735e-05,0.999911
+chr1	5421453	.	AGAAAAGAAAAGAAA	.	.	.	END=5421467;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:232.041:366.612,131.36:0.0,0.0:0.0,1.245e-07,1.0	0/0:27:0.99925:3,3:3-3,3-3:14,11,0,2:3,14:2,2:171.015:326.675,113.385:0.0,0.0:1.787e-42,0.000363445,0.999637
+chr1	5421483	.	AACAAACAAACAAACA	.	.	.	END=5421498;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999137:4,4:4-4,4-4:14,12,0,5:4,14:2,2|3,3:205.526:366.612,131.36:0.0,0.0:2.6384e-41,0.000376896,0.999628	0/0:23:0.98592:4,4:4-4,4-4:10,10,0,3:4,10:2,3:155.459:326.675,113.385:0.0,0.0:7.92884e-30,0.00829948,0.991719
+chr1	5421960	.	TTTGTTTGTTTG	.	.	.	END=5421971;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999768:3,3:3-3,3-3:15,7,0,2:3,15:2,2:142.043:366.612,131.36:0.0,0.0:0.0,9.03633e-05,0.999911	0/0:22:0.998824:3,3:2-3,2-3:13,8,0,0:3,13:NULL:131.18:326.675,113.385:0.452422,0.452422:2.207e-42,0.000683346,0.999318
+chr1	5429464	.	GGGTGGGTGGGT	.	.	.	END=5429475;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.947173:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.027:366.612,131.36:0.19802,0.19802:4.74538e-22,0.0328576,0.967201	0/0:35:0.992779:3,3:3-3,3-3:10,25,0,0:3,10:NULL:265.199:326.675,113.385:0.0,0.0:1.95984e-27,0.00480293,0.995206
+chr1	5439295	.	AAATAAATAAAT	.	.	.	END=5439306;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,15,0,2:3,37:2,2:300.503:366.612,131.36:0.0,0.0:0.0,4.26324e-11,1.0	0/0:34:0.999972:3,3:3-3,3-3:17,14,0,3:3,17:2,3:218.014:326.675,113.385:0.0,0.0:0.0,1.9811e-05,0.99998
+chr1	5439862	.	AAAAACAAAAACAAAAAC	.	.	.	END=5439879;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:37,18,0,0:3,37:NULL:309.002:366.612,131.36:0.0,0.0:0.0,7.11533e-11,1.0	0/0:42:1.0:3,3:3-3,3-3:28,12,0,2:3,28:2,2:231.902:326.675,113.385:0.0,0.0:0.0,2.05311e-08,1.0
+chr1	5439880	.	CAAGCAAGCAAG	.	.	.	END=5439891;RU=caag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:316.843:366.612,131.36:0.0,0.0:0.0,1.11968e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:28,14,0,2:3,28:2,2:247.995:326.675,113.385:0.0,0.0:0.0,1.62076e-08,1.0
+chr1	5440024	.	AAAACAAAACAAAAC	.	.	.	END=5440038;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,14,0,2:3,30:2,2:270.182:366.612,131.36:0.0,0.0:0.0,1.14812e-08,1.0	0/0:36:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:183.432:326.675,113.385:0.0,0.0:0.0,2.03527e-08,1.0
+chr1	5448684	.	GTGGTGGTGGTG	.	.	.	END=5448695;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:20,13,0,2:4,20:3,2:202.444:366.612,131.36:0.0,0.0:0.0,3.08094e-06,1.0	0/0:27:0.999992:4,4:4-4,4-4:19,8,0,0:4,19:NULL:144.751:326.675,113.385:0.0,0.0:0.0,1.63653e-05,0.999986
+chr1	5448817	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5448840;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.99861:6,6:6-6,6-6:13,8,0,3:6,13:3,1|4,2:144.918:366.612,131.36:0.0,0.0:1.36302e-38,0.000751979,0.999249	0/0:27:0.982701:6,6:6-6,6-6:9,13,0,5:6,9:2,1|4,2|5,2:191.308:326.675,113.385:0.0,0.0:8.67818e-27,0.0079832,0.992034
+chr1	5448857	.	AAACAAAACAAAACA	.	.	.	END=5448871;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.984248:3,3:3-3,3-3:9,8,0,0:3,9:NULL:107.217:366.612,131.36:0.0,0.0:1.10938e-30,0.00908823,0.990933	0/0:21:0.937648:3,3:3-3,3-3:8,13,0,0:3,8:NULL:154.225:326.675,113.385:0.220506,0.220506:1.31029e-26,0.0483356,0.95174
+chr1	5449710	.	TTTCTTTCTTTC	.	.	.	END=5449721;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:243.822:366.612,131.36:0.0,0.0:0.0,1.68455e-07,1.0	0/0:47:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:251.345:326.675,113.385:0.0,0.0:0.0,3.88499e-10,1.0
+chr1	5450202	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5450241;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.998109:25,25:25-27,25-27:14,20,0,18:25,14:5,3|6,3|7,2|9,1|11,1|14,1|15,1|17,2|18,2|22,1|25,1:392.37:366.612,131.36:0.480581,0.480581:0.0,0.0,1.0	0/0:73:0.91676:20,20:19-20,19-20:20,22,0,30:18,2|19,4|20,14:6,1|7,2|8,2|9,4|10,2|11,3|13,4|14,1|15,2|17,2|18,3|19,4:532.856:326.675,113.385:0.391308,0.391308:2.08895e-13,0.0831682,0.916927
+chr1	5457139	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5457182;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.986189:19,20:16-21,19-21:11,21,0,10:19,6|20,5:8,1|14,2|15,2|16,1|17,1|18,1|19,2:333.91:366.612,131.36:0.831565,0.667418:0.999903,9.76201e-05,1.34211e-13	0/3:41:0.947557:22,23:22-22,21-23:22,8,0,11:20,2|21,5|22,15:5,1|6,1|10,1|14,1|16,1|17,1|18,1|19,1|21,2|23,1:292.012:326.675,113.385:0.0990099,0.738271:2.52359e-16,0.000188425,0.999812
+chr1	5457182	.	GAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5457205;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:0.877325:12,12:7-13,7-13:24,22,0,2:8,2|12,19|13,3:8,1|12,1:339.915:366.612,131.36:2.23609,2.23609:8.74e-43,0.00860933,0.991412	0/0:39:0.980078:12,12:10-12,10-12:21,12,0,6:10,2|11,2|12,17:8,1|9,1|10,2|11,2:261.833:326.675,113.385:0.640587,0.640587:1.28858e-27,0.0199597,0.980082
+chr1	5458563	.	GTTGGTTGGTTG	.	.	.	END=5458574;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999991:3,3:3-3,3-3:18,14,0,2:3,18:2,2:209.978:366.612,131.36:0.0,0.0:0.0,1.73614e-05,0.999986	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:191.171:326.675,113.385:0.0,0.0:0.0,2.52026e-07,1.0
+chr1	5467842	.	TTGTTTGTTTGT	.	.	.	END=5467853;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:179.754:366.612,131.36:0.0,0.0:0.0,9.2688e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.865:326.675,113.385:0.0,0.0:0.0,8.0646e-07,1.0
+chr1	5469905	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5469964;RU=ttct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:27:0.779798:15,16:15-15,15-17:9,12,0,5:15,7|16,2:8,1|10,2|13,1|14,1:199.013:366.612,131.36:0.19802,0.57834:9.18276e-12,0.00672041,0.993294	0/0:61:0.998617:15,15:13-16,13-16:13,23,0,23:15,13:2,1|4,2|5,1|7,1|8,2|9,2|10,2|11,6|12,2|13,1|14,3:441.154:326.675,113.385:0.554102,0.554102:2.05185e-19,0.000934836,0.999067
+chr1	5470375	.	ATTTATTTATTTATTTATTT	.	.	.	END=5470394;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999856:5,5:5-5,5-5:16,12,0,2:5,16:4,2:185.188:366.612,131.36:0.0,0.0:0.0,6.52832e-05,0.999934	0/0:35:1.0:5,5:4-5,4-5:19,10,0,5:5,19:4,5:204.259:326.675,113.385:0.270063,0.270063:0.0,5.63075e-06,0.999995
+chr1	5487012	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=5487095;RU=aga;PERIOD=3;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.0641902:1,25:1-27,19-27:0,16,0,6:NULL:7,1|15,1|19,1|21,1|24,1|25,1:194.376:366.612,131.36:10.4167,2.80123:0.814845,0.18449,0.000731844	3/3:29:0.0350084:26,26:26-28,26-28:0,13,0,14:NULL:5,1|8,1|10,1|15,2|16,1|19,1|21,1|22,3|24,1|26,2:224.711:326.675,113.385:0.788731,0.788731:0.213982,0.516544,0.269537
+chr1	5487104	.	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	.	.	END=5487154;RU=gag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.221203:19,19:16-19,16-19:2,9,0,5:19,2:5,1|7,1|8,1|9,1|10,1:132.591:366.612,131.36:1.14809,1.14809:3.42417e-06,0.223225,0.776813	0/0:17:0.227302:17,17:10-17,10-17:3,6,0,7:17,3:5,2|7,1|8,1|10,2|11,1:122.998:326.675,113.385:3.21628,3.21628:1.88104e-06,0.621967,0.378086
+chr1	5491577	.	TTTCTTTCTTTCTTTC	.	.	.	END=5491592;RU=tttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999683:4,4:4-4,4-4:15,6,0,0:4,15:NULL:111.491:366.612,131.36:0.0,0.0:0.0,0.00020738,0.999796	0/0:32:0.999873:4,4:4-4,4-4:16,14,0,2:4,16:2,1|3,1:203.31:326.675,113.385:0.0,0.0:0.0,7.7951e-05,0.999925
+chr1	5495145	.	TATTATTATTAT	.	.	.	END=5495156;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999919:4,4:4-4,4-4:17,17,0,2:4,17:3,2:230.211:366.612,131.36:0.0,0.0:0.0,4.36298e-05,0.999957	0/0:34:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:190.37:326.675,113.385:0.0,0.0:0.0,9.03848e-07,1.0
+chr1	5499413	.	AAACAAACAAAC	.	.	.	END=5499424;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999984:3,3:3-3,3-3:18,9,0,0:3,18:NULL:151.645:366.612,131.36:0.0,0.0:0.0,1.95113e-05,0.99998	0/0:36:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:183.415:326.675,113.385:0.0,0.0:0.0,3.58705e-08,1.0
+chr1	5499767	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	AT	.	.	END=5499818;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00139684:1,1:1-3,1-3:0,4,0,0:NULL:NULL:36.3001:366.612,131.36:0.748295,0.748295:0.364437,0.535353,0.100301	.
+chr1	5504534	.	TATTTATTTATT	.	.	.	END=5504545;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,25,0,2:3,29:2,2:358.683:366.612,131.36:0.0,0.0:0.0,1.36141e-08,1.0	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:216.165:326.675,113.385:0.0,0.0:0.0,3.61663e-07,1.0
+chr1	5513530	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5513567;RU=tc;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.31293:23,23:19-24,19-24:3,13,0,9:23,3:4,1|6,1|7,1|9,1|10,1|18,1|20,1|22,1|23,1:206.714:366.612,131.36:2.04637,2.04637:2.11561e-29,0.066714,0.93338	0/0:34:0.987245:19,19:11-19,11-19:11,10,0,11:19,11:5,1|6,1|8,1|9,1|13,2|14,2|15,3:226.557:326.675,113.385:3.57627,3.57627:1.20532e-13,0.00759209,0.992424
+chr1	5516671	.	TCTCTCTCTCTCTC	.	.	.	END=5516684;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:33,10,0,3:7,33:6,3:244.379:366.612,131.36:0.0,0.0:0.0,5.01572e-10,1.0	0/0:24:0.999066:7,7:7-8,7-8:14,9,0,0:7,14:NULL:143.434:326.675,113.385:0.390807,0.390807:7.46736e-28,0.000425895,0.999576
+chr1	5518233	.	ACACACACACAC	.	.	.	END=5518244;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:6,6:6-6,6-6:20,8,0,0:6,20:NULL:155.727:366.612,131.36:0.0,0.0:4.54e-43,8.39984e-06,0.999994	0/0:40:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:203.485:326.675,113.385:0.139319,0.139319:0.0,1.84411e-08,1.0
+chr1	5522366	.	TTTATTTATTTA	.	.	.	END=5522377;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.998395:3,3:3-3,3-3:13,24,0,0:3,13:NULL:264.156:366.612,131.36:0.0,0.0:5.0445e-41,0.00110037,0.998906	0/0:35:0.99986:3,3:3-3,3-3:16,19,0,0:3,16:NULL:231.943:326.675,113.385:0.0,0.0:0.0,0.000107282,0.999895
+chr1	5526299	.	TTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTATTTATTTATTTAT	.	.	END=5526322;RU=ttat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.999594:6,9:6-9,9-9:8,13,0,2:6,2|9,6:4,1|5,1:173.311:366.612,131.36:1.17184,0.0:1.26762e-24,3.43917e-05,0.99997	0/0:20:0.999737:6,6:6-6,6-6:15,3,0,2:6,15:5,2:102.456:326.675,113.385:0.0,0.0:2.452e-42,0.000103453,0.999896
+chr1	5531371	.	AAATAAATAAATAAAT	.	.	.	END=5531386;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:22,11,0,5:4,22:2,5:220.017:366.612,131.36:0.0,0.0:0.0,1.25235e-06,1.0	0/0:29:0.999984:4,4:4-4,4-4:18,9,0,2:4,18:2,1|3,1:165.399:326.675,113.385:0.0,0.0:0.0,2.12228e-05,0.999979
+chr1	5532982	.	TGTGTGTGTGTGTGTG	TGTGTGTG	.	.	END=5532997;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.0437343:4,4:4-8,4-8:0,23,0,0:NULL:NULL:212.091:366.612,131.36:1.29055,1.29055:0.450508,0.449184,0.100457	0/0:42:1.0:8,8:8-8,8-8:27,12,0,3:8,27:6,1|7,2:250.369:326.675,113.385:0.0,0.0:1.72e-43,5.25782e-08,1.0
+chr1	5534046	.	ATGTATGTATGTATGT	.	.	.	END=5534061;RU=atgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:29,14,0,6:4,29:3,6:287.447:366.612,131.36:0.0990099,0.0990099:0.0,5.60014e-09,1.0	0/0:46:1.0:4,4:4-4,4-4:27,16,0,3:4,27:3,3:272.756:326.675,113.385:0.0,0.0:0.0,1.82221e-08,1.0
+chr1	5534075	.	TATGTATGTATGTATG	.	.	.	END=5534090;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:35,13,0,3:4,35:2,1|3,2:280.629:366.612,131.36:0.0,0.0:0.0,1.11186e-10,1.0	0/0:47:1.0:4,4:4-4,4-4:30,15,0,2:4,30:3,2:273.347:326.675,113.385:0.0,0.0:0.0,3.21582e-09,1.0
+chr1	5534127	.	TGTGTGTGTGTG	.	.	.	END=5534138;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:6,6:6-6,6-6:26,19,0,0:6,26:NULL:275.467:366.612,131.36:0.139319,0.139319:0.0,3.5554e-07,1.0	0/0:55:1.0:6,6:6-6,6-6:31,20,0,4:6,31:4,1|5,3:344.947:326.675,113.385:0.0,0.0:0.0,1.02131e-09,1.0
+chr1	5538600	.	TTTTGTTTTGTTTTG	.	.	.	END=5538614;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.793571:3,3:3-3,3-3:5,25,0,0:3,5:NULL:251.759:366.612,131.36:0.0990099,0.0990099:2.33087e-17,0.156038,0.844041	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.842:326.675,113.385:0.0,0.0:0.0,3.18443e-07,1.0
+chr1	5539245	.	AGAGAGAGAGAG	.	.	.	END=5539256;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:5-6,5-6:24,10,0,2:6,24:4,1|5,1:203.302:366.612,131.36:0.169767,0.169767:0.0,3.64039e-07,1.0	0/0:36:1.0:6,6:6-7,6-7:20,15,0,0:6,20:NULL:216.86:326.675,113.385:0.236383,0.236383:0.0,7.99914e-06,0.999994
+chr1	5541995	.	TCTATCTATCTA	.	.	.	END=5542006;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:198.958:366.612,131.36:0.0,0.0:0.0,7.97423e-06,0.999994	0/0:32:1.0:3,3:3-3,3-3:25,7,0,0:3,25:NULL:162.531:326.675,113.385:0.0,0.0:0.0,1.63627e-07,1.0
+chr1	5543920	.	AAACAAACAAACAAACAAAC	.	.	.	END=5543939;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:5,5:5-5,5-5:27,14,0,5:5,27:3,2|4,3:270.026:366.612,131.36:0.0,0.0:0.0,1.74728e-08,1.0	0/0:43:1.0:5,5:5-5,5-5:32,8,0,3:5,32:4,3:218.073:326.675,113.385:0.0,0.0:0.0,7.62889e-10,1.0
+chr1	5548928	.	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	.	.	END=5548963;RU=gtgtgc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.996997:5,5:4-6,4-6:12,16,0,2:5,12:3,2:215.759:366.612,131.36:0.563226,0.563226:0.999097,0.000907121,4.83865e-25	0/0:40:1.00001:6,6:3-6,3-6:21,12,0,6:6,21:2,1|4,1|5,4:243.175:326.675,113.385:0.650759,0.650759:0.0,1.87243e-06,1.0
+chr1	5568606	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATATATA	.	.	END=5568637;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.191459:12,12:12-13,12-13:2,0,0,0:12,2:NULL:8.72991:366.612,131.36:0.472558,0.472558:0.898586,0.101517,4.30333e-07	0/0:6:0.241205:16,16:11-16,11-16:3,0,0,0:16,3:NULL:13.3392:326.675,113.385:1.94044,1.94044:0.0041078,0.534572,0.461435
+chr1	5568681	.	TCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTC	.	.	END=5568700;RU=tc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.167585:9,9:6-10,6-10:2,1,0,0:9,2:NULL:16.2695:366.612,131.36:1.41933,1.41933:0.676238,0.323648,0.000128575	0/0:4:0.389106:10,10:10-10,10-10:3,1,0,0:10,3:NULL:20.8043:326.675,113.385:0.0,0.0:0.000122906,0.325088,0.674802
+chr1	5568724	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAG	.	.	END=5568751;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.981721:10,11:6-10,6-11:7,1,0,0:10,4|11,3:NULL:42.692:366.612,131.36:1.60988,1.61328:0.999643,0.000360942,2.85432e-12	0/0:8:0.667283:14,14:14-14,14-14:5,3,0,0:14,5:NULL:46.9753:326.675,113.385:0.0,0.0:4.33107e-07,0.162209,0.837866
+chr1	5571339	.	AACAACAACAAC	.	.	.	END=5571350;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.993811:4,4:4-4,4-4:11,9,0,0:4,11:NULL:128.626:366.612,131.36:0.0,0.0:1.40082e-30,0.0044127,0.995598	0/0:28:0.999866:4,4:2-4,2-4:16,9,0,2:4,16:3,2:161.802:326.675,113.385:0.885129,0.885129:3.8e-44,6.70363e-05,0.999934
+chr1	5573523	.	GAAAGAAAGAAAGAAA	.	.	.	END=5573538;RU=gaaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99979:4,4:4-4,4-4:15,12,0,2:4,15:3,2:184.59:366.612,131.36:0.0,0.0:1.7e-44,0.000114813,0.999887	0/0:42:1.0:4,4:4-5,4-5:23,14,0,4:4,23:3,4:249.905:326.675,113.385:0.311527,0.311527:0.0,4.699e-07,1.0
+chr1	5573587	.	AAAGAAAGAAAG	.	.	.	END=5573598;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999662:3,3:3-3,3-3:14,13,0,2:3,14:2,2:192.077:366.612,131.36:0.0,0.0:0.0,0.000165596,0.999835	0/0:41:1.0:3,3:3-3,3-3:24,15,0,2:3,24:3,2:244.91:326.675,113.385:0.0,0.0:0.0,1.01008e-07,1.0
+chr1	5579717	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5579762;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:26:0.03869:26,26:21-26,21-26:0,16,0,8:NULL:7,1|9,1|16,2|18,1|20,1|23,1|26,1:220.015:366.612,131.36:2.18267,2.18267:3.56267e-15,0.437331,0.562764	0/1:30:0.28606:23,25:21-23,21-28:4,10,0,14:23,4:5,1|6,1|8,1|9,1|12,2|13,1|14,1|15,1|17,1|21,1|22,2|25,1:229.174:326.675,113.385:0.446534,1.60396:2.90831e-11,0.000185028,0.999818
+chr1	5581808	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5581829;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999005:12,12:12-12,12-12:14,15,0,6:12,14:5,1|6,1|8,1|9,2|11,1:246.406:366.612,131.36:0.0,0.0:7.50395e-39,0.00022835,0.999773	0/0:16:0.918632:11,11:11-12,11-12:7,5,0,3:11,7:6,1|10,1|11,1:96.9763:326.675,113.385:0.40582,0.40582:1.2915e-18,0.016726,0.983311
+chr1	5585680	.	CTCTCTCTCTCT	CTCTCTCTCTCTCT	.	.	END=5585691;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.716874:6,7:6-6,6-7:13,10,0,0:6,11|7,2:NULL:153.498:366.612,131.36:0.0,0.491073:1.32097e-24,0.000262666,0.999742	0/0:19:0.985692:6,6:6-6,6-6:10,9,0,0:6,10:NULL:122.269:326.675,113.385:0.0,0.0:2.78805e-20,0.00890045,0.99112
+chr1	5589327	.	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	.	.	END=5589356;RU=ggt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.975048:12,12:12-12,12-12:9,13,0,2:12,9:7,2:169.879:366.612,131.36:0.0,0.0:3.58951e-33,0.00724252,0.992775	0/0:24:0.964384:10,10:9-10,9-10:8,11,0,4:10,8:4,1|5,1|9,2:162.775:326.675,113.385:0.465241,0.465241:2.92195e-21,0.0195605,0.980478
+chr1	5589376	.	TGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5589399;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.122528:23,23:19-23,19-23:2,12,0,0:23,2:NULL:116.017:366.612,131.36:1.34493,1.34493:0.0,0.0,1.0	0/0:28:0.992728:12,12:9-12,9-12:11,11,0,4:12,11:7,1|10,1|11,2:180.542:326.675,113.385:1.30955,1.30955:2.36841e-16,0.00337366,0.996634
+chr1	5589780	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5589835;RU=tg;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.684515:22,22:22-22,22-22:5,9,0,11:22,5:9,2|10,2|12,1|15,3|17,2|20,1:194.5:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.434615:28,28:25-29,25-29:4,10,0,15:28,4:4,1|8,2|10,2|11,1|13,2|14,2|18,2|19,1|21,1|26,1:229.133:326.675,113.385:1.42595,1.42595:5.64146e-05,0.301819,0.698134
+chr1	5592598	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5592667;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0124984:36,36:2-36,2-36:0,10,0,6:NULL:8,1|17,1|22,1|23,1|33,1|34,1:142.041:366.612,131.36:12.4172,12.4172:0.208392,0.695051,0.0966789	0/0:36:0.217245:35,35:30-35,30-35:2,17,0,16:35,2:5,1|6,2|10,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|26,1|28,1|29,1|34,2:297.947:326.675,113.385:1.11605,1.11605:0.00272634,0.394995,0.602354
+chr1	5593742	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5593777;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.887398:18,19:16-22,16-22:6,10,0,5:18,4|19,2:6,1|8,1|9,2|11,1:165.187:366.612,131.36:1.81321,1.54443:3.33702e-07,0.0161178,0.983918	0/0:40:0.971211:18,18:17-18,17-18:16,12,0,11:17,3|18,13:4,1|5,1|7,1|9,1|11,1|12,1|13,2|14,1|15,1|17,1:276.968:326.675,113.385:0.323567,0.323567:7.60834e-14,0.0281487,0.971905
+chr1	5594362	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594409;RU=acagatatcagc;PERIOD=12;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.99997:4,4:4-4,4-4:19,9,0,7:4,19:2,4|3,3:214.928:366.612,131.36:0.0,0.0:2.03387e-23,3.57251e-05,0.999964	0/0:29:0.993895:4,4:4-4,4-4:11,12,0,6:4,11:3,6:194.69:326.675,113.385:0.0,0.0:1.35695e-13,0.00487052,0.995139
+chr1	5594483	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594518;RU=acagatatcagc;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.992171:3,3:3-3,3-3:10,9,0,6:3,10:2,5|3,1:162.564:366.612,131.36:0.0,0.0:1.07008e-20,0.00423133,0.995779	0/0:27:0.99893:3,3:3-3,3-3:13,11,0,3:3,13:2,2|3,1:171.44:326.675,113.385:0.0,0.0:2.17272e-24,0.000780489,0.999225
+chr1	5601522	.	CTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5601537;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.381909:19,19:16-19,16-19:3,10,0,3:19,3:6,1|11,1|18,1:127.14:366.612,131.36:0.550196,0.550196:0.0,0.0,1.0	0/0:10:0.859694:8,8:6-8,6-8:7,2,0,0:8,7:NULL:47.0547:326.675,113.385:0.81164,0.81164:3.07523e-11,0.0813469,0.918751
+chr1	5601538	.	CACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACA	.	.	END=5601571;RU=ca;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0438883:20,20:20-23,20-23:0,8,0,7:NULL:4,1|5,1|6,2|9,1|13,2:127.313:366.612,131.36:1.37748,1.37748:0.0,0.0,1.0	1/1:12:0.226687:15,15:15-17,15-17:2,4,0,4:15,2:4,1|8,1|10,1|14,1:74.861:326.675,113.385:0.733609,0.733609:0.596184,0.403375,0.000510556
+chr1	5605789	.	TATATATATATA	.	.	.	END=5605800;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.999173:6,6:6-6,6-6:14,6,0,0:6,14:NULL:109.551:366.612,131.36:0.0,0.0:1.50464e-25,0.000455149,0.999546	0/0:11:0.680517:6,6:6-7,6-7:5,5,0,0:6,5:NULL:67.2546:326.675,113.385:0.491073,0.491073:1.41842e-09,0.179353,0.820711
+chr1	5607518	.	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTC,CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	.	.	END=5607567;RU=ccctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:6:0.0428456:7,7:2-8,2-8:0,3,0,3:NULL:5,2|6,1:47.4534:366.612,131.36:1.42106,1.42106:1.0,0.0,0.0	1/1:4:0.0418975:6,6:6-9,6-9:0,3,0,0:NULL:NULL:28.9:326.675,113.385:1.35727,1.35727:0.366524,0.478544,0.154989
+chr1	5609483	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=5609534;RU=tctt;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:27:0.457214:16,18:13-16,13-18:8,9,0,9:13,3|16,5:2,1|3,1|4,1|7,2|8,1|13,1|16,1|18,1:204.837:366.612,131.36:1.26965,2.41742:5.45352e-38,3.81258e-08,1.0	1/0:36:0.820827:12,13:8-13,13-13:9,13,0,13:12,2|13,7:4,1|5,1|6,3|7,3|9,1|10,3|12,1:260.367:326.675,113.385:1.75429,0.0:1.0024e-14,0.823073,0.176996
+chr1	5609614	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5609639;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.974538:19,24:16-24,19-24:4,6,0,3:19,2|24,2:9,1|12,1|16,1:103.857:366.612,131.36:1.59046,1.91609:0.0,0.0,1.0	0/0:20:0.542862:13,13:11-13,11-13:4,12,0,4:13,4:7,2|9,1|11,1:160.209:326.675,113.385:0.497617,0.497617:1.63911e-05,0.276384,0.723601
+chr1	5612315	.	CTGGCTGGCTGG	.	.	.	END=5612326;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998233:3,3:3-3,3-3:13,15,0,0:3,13:NULL:191.934:366.612,131.36:0.0,0.0:2.74e-42,0.00100296,0.998999	0/0:22:0.940243:3,3:3-3,3-3:7,15,0,0:3,7:NULL:175.706:326.675,113.385:0.0,0.0:7.17578e-23,0.0445383,0.955537
+chr1	5612776	.	TTTATTTATTTA	.	.	.	END=5612787;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999995:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.896:366.612,131.36:0.0,0.0:0.0,1.15696e-05,0.999987	0/0:18:0.999421:3,3:3-3,3-3:14,4,0,0:3,14:NULL:91.4822:326.675,113.385:0.0,0.0:5.724e-42,0.000277712,0.999727
+chr1	5614359	.	TCCCTCCCTCCCTCCC	.	.	.	END=5614374;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998846:4,4:4-4,4-4:13,11,0,2:4,13:2,1|3,1:165.446:366.612,131.36:0.0,0.0:3.5e-44,0.00055509,0.999447	0/0:28:0.999522:4,4:4-4,4-4:15,13,0,0:4,15:NULL:179.777:326.675,113.385:0.0,0.0:0.0,0.000362995,0.999637
+chr1	5616757	.	AAGCAAGCAAGC	.	.	.	END=5616768;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999861:3,3:3-3,3-3:16,17,0,0:3,16:NULL:219.518:366.612,131.36:0.0,0.0:0.0,8.99908e-05,0.999911	0/0:26:0.999902:3,3:3-3,3-3:16,8,0,2:3,16:2,2:151.309:326.675,113.385:0.0,0.0:0.0,4.69939e-05,0.999956
+chr1	5617140	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5617189;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:30:0.290156:25,43:24-26,23-43:5,6,0,16:25,5:5,1|6,1|8,1|12,2|14,1|20,2|21,2|22,3|23,1|24,1|43,1:206.925:366.612,131.36:0.344122,8.89312:2.08458e-12,2.3267e-06,1.0	0/0:26:0.343833:25,25:24-26,24-26:11,6,0,9:24,3|25,6|26,2:7,1|9,1|11,1|15,1|17,1|18,1|19,1|20,1|23,1:192.044:326.675,113.385:0.713833,0.713833:5.2481e-07,0.146591,0.853494
+chr1	5617615	.	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	.	.	END=5617699;RU=ttctc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.287728:17,17:14-19,14-19:2,2,0,10:17,2:6,1|7,2|11,1|12,4|16,2:101.018:366.612,131.36:0.856307,0.856307:4.75116e-05,0.26636,0.733597	1/1:9:0.0362275:20,20:16-20,16-20:0,1,0,7:NULL:4,1|6,1|10,1|13,1|15,1|16,2:57.8107:326.675,113.385:1.3165,1.3165:0.059034,0.378311,0.562803
+chr1	5618977	.	CAGCAGCAGCAG	.	.	.	END=5618988;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,18,0,0:4,23:NULL:253.62:366.612,131.36:0.0,0.0:0.0,8.95862e-07,1.0	0/0:31:0.999995:4,4:4-4,4-4:20,11,0,0:4,20:NULL:187.212:326.675,113.385:0.0,0.0:0.0,1.45056e-05,0.999987
+chr1	5620595	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5620640;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.138323:25,25:21-25,21-25:2,14,0,9:25,2:5,1|6,1|7,1|12,1|13,2|15,1|20,1|23,1:216.568:366.612,131.36:0.923821,0.923821:3.11768e-12,0.378233,0.621819	0/0:23:0.370281:23,23:22-24,22-24:6,4,0,12:22,2|23,4:6,1|7,2|11,1|12,1|18,1|19,1|20,1|21,1|22,3:165.941:326.675,113.385:0.722976,0.722976:0.000106707,0.555466,0.444532
+chr1	5623551	.	TTATTTTATTTTATT	.	.	.	END=5623565;RU=ttatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.671791:3,3:1-3,1-3:5,10,0,0:3,5:NULL:113.692:366.612,131.36:0.390054,0.390054:2.78286e-16,0.187197,0.812863	0/0:21:0.999475:3,3:3-3,3-3:14,5,0,2:3,14:2,2:115.762:326.675,113.385:0.0,0.0:1e-44,0.000232575,0.999772
+chr1	5625250	.	CACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5625297;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.291461:22,33:22-22,21-35:11,19,0,15:21,2|22,9:8,1|9,3|11,2|16,3|17,1|18,2|19,1|21,1|32,1:360.412:366.612,131.36:0.0,5.49805:9.90578e-05,0.999903,3.27363e-12	0/0:53:0.576253:24,24:23-24,23-24:22,19,0,11:23,7|24,15:7,1|8,1|10,1|12,1|16,1|20,1|21,2|22,2|23,1:376.926:326.675,113.385:0.452422,0.452422:2.10056e-11,0.4238,0.576288
+chr1	5626755	.	TATATATATATATA	TA	.	.	END=5626768;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.00338735:1,1:1-4,1-4:0,5,0,0:NULL:NULL:46.7652:366.612,131.36:0.896026,0.896026:0.0533552,0.4034,0.543409	0/0:11:0.951073:7,7:7-7,7-7:8,3,0,0:7,8:NULL:57.6703:326.675,113.385:0.0,0.0:2.05221e-11,0.0266218,0.973432
+chr1	5627434	.	ACCCACCCACCC	.	.	.	END=5627445;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.439336:3,3:3-3,3-3:3,1,0,0:3,3:NULL:21.193:366.612,131.36:0.29703,0.29703:7.97056e-09,0.185254,0.814805	0/0:13:0.981742:3,3:3-3,3-3:9,4,0,0:3,9:NULL:71.9961:326.675,113.385:0.0,0.0:7.77127e-24,0.00726744,0.992752
+chr1	5628800	.	GTGTGTGTGTGT	.	.	.	END=5628811;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999987:6,6:6-6,6-6:19,26,0,0:6,19:NULL:306.178:366.612,131.36:0.0,0.0:2.44924e-39,2.24444e-05,0.999979	0/0:32:0.999816:6,6:6-6,6-6:16,16,0,0:6,16:NULL:198.309:326.675,113.385:0.0,0.0:1.65706e-33,0.000107345,0.999895
+chr1	5634536	.	ACATACATACAT	.	.	.	END=5634547;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999781:3,3:3-3,3-3:15,18,0,2:3,15:2,2:241.613:366.612,131.36:0.0,0.0:5.3e-44,0.000139803,0.999864	0/0:24:0.999689:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.811:326.675,113.385:0.0,0.0:3.2e-44,0.000172858,0.999827
+chr1	5645300	.	CCACCCACCCACCCAC	.	.	.	END=5645315;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,14,0,3:4,26:2,1|3,2:257.308:366.612,131.36:0.0,0.0:0.0,5.39436e-08,1.0	0/0:20:0.987727:4,4:4-4,4-4:10,10,0,0:4,10:NULL:132.37:326.675,113.385:0.0,0.0:1.37064e-33,0.00887219,0.991149
+chr1	5648208	.	TTTCTTTCTTTC	.	.	.	END=5648219;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:236.188:366.612,131.36:0.0,0.0:0.0,3.50995e-06,1.0	0/0:19:0.998321:3,3:3-3,3-3:13,6,0,0:3,13:NULL:107.261:326.675,113.385:0.0,0.0:4.6e-44,0.00108233,0.998922
+chr1	5658059	.	AACCAACCAACCAACCAACCAACCAACCAACC	.	.	.	END=5658090;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.997758:8,8:8-8,8-8:12,19,0,6:8,12:5,3|6,1|7,2:270.432:366.612,131.36:0.0,0.0:4.34303e-37,0.00122251,0.998784	0/0:22:0.995541:8,8:8-8,8-8:11,4,0,7:8,11:3,2|6,2|7,3:134.487:326.675,113.385:0.0,0.0:2.63941e-34,0.0014174,0.998587
+chr1	5659996	.	ACACACACACACAC	.	.	.	END=5660009;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999491:7,7:7-7,7-7:15,22,0,2:7,15:5,2:281.623:366.612,131.36:0.0,0.0:5.3889e-37,0.000244781,0.999758	0/0:32:1.00001:7,7:7-7,7-7:23,7,0,2:7,23:5,1|6,1:172.037:326.675,113.385:0.0,0.0:0.0,5.81845e-07,1.0
+chr1	5667369	.	TTGTTTTGTTTTGTT	.	.	.	END=5667383;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999211:3,3:3-3,3-3:14,19,0,0:3,14:NULL:237.415:366.612,131.36:0.0,0.0:1e-45,0.00064475,0.999356	0/0:19:0.991355:3,3:3-3,3-3:10,9,0,0:3,10:NULL:123.116:326.675,113.385:0.0,0.0:3.09465e-33,0.00534692,0.994664
+chr1	5668188	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5668233;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.973632:17,17:16-17,16-17:16,18,0,8:16,3|17,13:5,2|7,1|8,1|13,1|15,1|16,2:309.774:366.612,131.36:0.345543,0.345543:1.0,0.0,0.0	0/0:29:0.878676:23,23:22-23,22-23:7,12,0,9:23,7:8,1|12,2|15,2|16,2|17,1|20,1:213.066:326.675,113.385:0.298675,0.298675:7.90049e-11,0.0683182,0.931775
+chr1	5668714	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5668747;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:49:0.306761:28,31:28-30,29-32:5,13,0,30:28,3|29,2:4,1|5,1|6,1|7,1|8,2|9,1|10,2|12,1|13,1|14,1|15,1|16,1|17,1|18,5|22,2|23,2|24,1|27,1|28,1|30,1|31,2:394.435:366.612,131.36:0.553571,0.556925:0.0,0.0,1.0	0/0:47:0.937667:17,17:17-18,17-18:21,12,0,12:17,18|18,3:6,1|7,1|8,2|10,2|12,1|13,1|15,3|16,1:308.257:326.675,113.385:0.334882,0.334882:4.03709e-26,5.38759e-06,0.999995
+chr1	5683487	.	CAAACAAACAAACAAA	.	.	.	END=5683502;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:221.239:366.612,131.36:0.0,0.0:0.0,1.81181e-06,1.0	0/0:32:0.999211:4,4:3-4,3-4:13,15,0,3:4,13:3,3:210.706:326.675,113.385:0.40582,0.40582:2.35e-43,0.000417593,0.999584
+chr1	5686946	.	ACTCCACTCCACTCCACTCCACTCC	.	.	.	END=5686970;RU=actcc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:5,5:5-5,5-5:20,16,0,3:5,20:3,3:251.76:366.612,131.36:0.0,0.0:0.0,1.09203e-05,0.999993	0/0:36:1.00001:5,5:5-5,5-5:21,11,0,4:5,21:3,2|4,2:214.731:326.675,113.385:0.0,0.0:0.0,1.48824e-06,1.0
+chr1	5691957	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5691994;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0317843:25,25:25-29,25-29:0,7,0,5:NULL:4,1|18,1|20,1|22,2:107.25:366.612,131.36:1.14347,1.14347:0.0,0.0,1.0	1/0:25:0.774457:18,19:16-19,19-19:6,7,0,11:18,2|19,4:6,2|7,1|8,1|9,2|10,1|13,1|17,1|18,2:184.123:326.675,113.385:1.0388,0.139319:1.04829e-05,0.781348,0.218685
+chr1	5702366	.	GGGTGGGTGGGT	.	.	.	END=5702377;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.928342:3,3:3-3,3-3:7,18,0,0:3,7:NULL:186.16:366.612,131.36:0.0,0.0:1.29376e-20,0.0464803,0.953593	0/0:39:0.952356:3,3:3-3,3-3:7,30,0,2:3,7:2,2:314.196:326.675,113.385:0.0,0.0:6.10428e-21,0.0250173,0.975031
+chr1	5703039	.	TTTCTTTCTTTC	.	.	.	END=5703050;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:177.97:366.612,131.36:0.0,0.0:0.0,6.52669e-08,1.0	0/0:23:0.999954:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.288:326.675,113.385:0.0,0.0:0.0,1.64207e-05,0.999986
+chr1	5703348	.	TCTCTCTCTCTC	.	.	.	END=5703359;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999335:6,6:6-7,6-7:14,9,0,0:6,14:NULL:139.208:366.612,131.36:0.323567,0.323567:5.59831e-29,0.000328401,0.999674	0/0:34:0.999944:6,6:6-6,6-6:17,15,0,2:6,17:5,1|6,1:213.761:326.675,113.385:0.0,0.0:4.966e-42,1.96654e-05,0.99998
+chr1	5705129	.	TTTATTTATTTA	.	.	.	END=5705140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999745:3,3:3-3,3-3:14,13,0,4:3,14:2,4:207.898:366.612,131.36:0.0,0.0:0.0,0.000127164,0.999873	0/0:29:0.999993:3,3:3-3,3-3:18,9,0,2:3,18:2,2:172.875:326.675,113.385:0.0,0.0:0.0,1.42805e-05,0.999987
+chr1	5705229	.	CCCACCCACCCA	.	.	.	END=5705240;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:230.431:366.612,131.36:0.0,0.0:0.0,2.13014e-06,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.539:326.675,113.385:0.0,0.0:0.0,2.42264e-06,1.0
+chr1	5706741	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=5706764;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999701:7,7:6-7,6-7:15,10,0,0:7,15:NULL:155.182:366.612,131.36:0.311527,0.311527:0.0,0.000164888,0.999835	0/0:29:0.99992:6,6:5-6,5-6:17,8,0,3:6,17:3,2|5,1:162.246:326.675,113.385:0.236383,0.236383:0.0,4.85328e-05,0.999955
+chr1	5708798	.	TTTATTTATTTA	.	.	.	END=5708809;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:28,18,0,0:3,28:NULL:273.838:366.612,131.36:0.0,0.0:0.0,2.28799e-08,1.0	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.191:326.675,113.385:0.0,0.0:0.0,5.58044e-06,0.999995
+chr1	5709925	.	TTCTTTCTTTCT	TTCTTTCT	.	.	END=5709936;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:1.0:2,2:2-2,2-2:19,16,0,0:2,19:NULL:225.294:366.612,131.36:0.0,0.0:0.999993,1.1175e-05,0.0	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:224.239:326.675,113.385:0.0,0.0:0.0,9.42141e-08,1.0
+chr1	5710226	.	TTGTTTTGTTTTGTTTTGTT	.	.	.	END=5710245;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:2-4,2-4:32,19,0,2:4,32:2,1|3,1:318.661:366.612,131.36:0.507951,0.507951:0.0,1.20364e-09,1.0	0/0:47:1.0:4,4:4-4,4-4:23,19,0,5:4,23:2,1|3,4:301.264:326.675,113.385:0.0,0.0:0.0,4.63585e-07,1.0
+chr1	5712340	.	AAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAAC	.	.	END=5712369;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.780734:2,2:2-2,2-2:5,14,0,0:2,5:NULL:149.149:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/0:21:0.997542:6,6:6-6,6-6:12,6,0,3:6,12:2,1|3,1|5,1:124.805:326.675,113.385:0.0,0.0:2.80473e-30,0.00135867,0.998648
+chr1	5718275	.	TTTATTTATTTA	.	.	.	END=5718286;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:246.484:366.612,131.36:0.0,0.0:0.0,3.01196e-06,1.0	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.25:326.675,113.385:0.0,0.0:0.0,2.59941e-06,1.0
+chr1	5722194	.	TATATATATATA	TATATATATATATA	.	.	END=5722205;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.999787:7,7:7-7,7-7:16,17,0,0:7,16:NULL:216.966:366.612,131.36:0.0,0.0:4.42e-42,7.55325e-05,0.999926	0/0:12:0.936977:6,6:5-7,5-7:8,2,0,0:6,8:NULL:48.6909:326.675,113.385:0.651813,0.651813:1.33637e-13,0.034441,0.965621
+chr1	5722249	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5722268;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999984:4,4:4-4,4-4:18,16,0,2:4,18:3,2:229.225:366.612,131.36:0.0,0.0:0.0,2.02604e-05,0.99998	0/0:18:0.995876:4,4:4-4,4-4:11,5,0,2:4,11:3,2:99.6182:326.675,113.385:0.0,0.0:5.11647e-38,0.0017386,0.998268
+chr1	5727994	.	ATACATACATAC	.	.	.	END=5728005;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:199.933:366.612,131.36:0.0,0.0:0.0,2.5561e-07,1.0	0/0:12:0.919973:3,3:3-3,3-3:7,5,0,0:3,7:NULL:75.9551:326.675,113.385:0.0,0.0:7.27925e-25,0.0435556,0.956519
+chr1	5733779	.	ACCCACCCACCC	.	.	.	END=5733790;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.995933:3,3:3-3,3-3:11,31,0,0:3,11:NULL:317.64:366.612,131.36:0.0,0.0:2.46417e-33,0.00271117,0.997298	0/0:22:0.930157:3,3:3-3,3-3:7,15,0,0:3,7:NULL:161.446:326.675,113.385:0.0,0.0:3.30203e-21,0.0487605,0.951318
+chr1	5742710	.	GGGTGGGTGGGT	.	.	.	END=5742721;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998455:3,3:3-3,3-3:11,27,0,2:3,11:2,2:291.594:366.612,131.36:0.0,0.0:2.44778e-34,0.000965837,0.999036	0/0:42:0.958695:3,3:3-3,3-3:7,33,0,2:3,7:2,2:337.752:326.675,113.385:0.0,0.0:8.78633e-22,0.0259419,0.974111
+chr1	5743415	.	TTTATTTATTTA	.	.	.	END=5743426;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,21,0,0:3,22:NULL:279.685:366.612,131.36:0.0,0.0:0.0,2.47098e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:27,14,0,0:3,27:NULL:231.169:326.675,113.385:0.0,0.0:0.0,4.34196e-08,1.0
+chr1	5743494	.	CCCACCCACCCACCCA	.	.	.	END=5743509;RU=ccca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.987266:4,4:4-4,4-4:10,30,0,0:4,10:NULL:311.546:366.612,131.36:0.0,0.0:2.71427e-30,0.0104821,0.989543	0/0:38:0.997609:4,4:4-4,4-4:12,23,0,3:4,12:2,1|3,2:280.913:326.675,113.385:0.0,0.0:5.76151e-36,0.00168956,0.998315
+chr1	5749087	.	CTCTTGCTCTTGCTCTTG	.	.	.	END=5749104;RU=ctcttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999994:3,3:3-3,3-3:20,23,0,2:3,20:2,2:306.234:366.612,131.36:0.0,0.0:0.0,1.8489e-05,0.999985	0/0:39:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:211.324:326.675,113.385:0.0,0.0:0.0,2.97405e-08,1.0
+chr1	5759909	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5759948;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.929275:26,26:25-26,25-26:11,14,0,14:25,2|26,9:7,1|11,3|15,2|17,1|18,1|19,1|20,1|22,1|23,1|24,1|25,1:288.672:366.612,131.36:0.195027,0.195027:0.0,0.0,1.0	0/0:31:0.96388:20,20:18-21,18-21:13,9,0,7:18,2|20,11:9,1|10,1|11,2|18,1|19,1|20,1:200.219:326.675,113.385:0.49505,0.49505:7.4202e-20,0.0325171,0.967542
+chr1	5762305	.	AGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAG	.	.	END=5762320;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:29:0.990522:8,9:8-9,9-9:8,17,0,4:8,2|9,6:4,1|5,1|7,2:232.974:366.612,131.36:0.419363,0.0990099:6.99306e-19,0.000572497,0.999431	0/0:33:0.999964:8,8:8-8,8-8:18,13,0,2:8,18:5,1|6,1:200.676:326.675,113.385:0.0,0.0:6.50713e-37,2.77855e-05,0.999972
+chr1	5769922	.	TTGTTTGTTTGTTTGTTTGT	TTGTTTGTTTGTTTGTTTGTTTGT	.	.	END=5769941;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999988:6,6:5-6,5-6:19,13,0,6:6,19:3,3|5,3:242.009:366.612,131.36:0.169767,0.169767:0.0,2.48747e-06,1.0	0/0:30:0.999919:5,5:5-5,5-5:16,10,0,4:5,16:4,4:189.343:326.675,113.385:0.0,0.0:0.0,3.41362e-05,0.99997
+chr1	5772735	.	AAATAAATAAATAAAT	.	.	.	END=5772750;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.99989:4,4:4-4,4-4:16,22,0,4:4,16:2,1|3,3:292.378:366.612,131.36:0.0,0.0:0.0,6.38866e-05,0.99994	0/0:28:0.999846:4,4:4-4,4-4:17,11,0,0:4,17:NULL:171.988:326.675,113.385:0.0,0.0:0.0,0.000125561,0.999879
+chr1	5773613	.	GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	GGAGGGGAGGGGAGGGGAGGGGAGG,GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	.	.	END=5773672;RU=ggagg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:4:0.0340636:7,7:3-7,3-7:0,0,0,4:NULL:2,1|3,1|5,1|7,1:28.2102:366.612,131.36:1.30122,1.30122:1.0,0.0,0.0	1/1:7:0.0502929:5,5:4-6,4-6:0,2,0,5:NULL:3,2|4,2|5,1:52.5778:326.675,113.385:0.782491,0.782491:1.0,0.0,0.0
+chr1	5774929	.	AAAATAAAATAAAATAAAATAAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT,AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	.	.	END=5774963;RU=aaaat;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.996759:13,14:4-13,4-14:6,11,0,2:13,4|14,2:2,2:151.098:366.612,131.36:3.55444,4.36098:9.05931e-17,0.00197197,0.998034	0/0:32:0.999866:7,7:6-7,6-7:16,9,0,6:7,16:3,2|4,2|5,2:193.838:326.675,113.385:0.311527,0.311527:6.10738e-38,9.78369e-05,0.999903
+chr1	5775613	.	AAACAAACAAACAAAC	.	.	.	END=5775628;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999805:4,4:4-4,4-4:16,15,0,0:4,16:NULL:202.513:366.612,131.36:0.0,0.0:0.0,0.000142664,0.999858	0/0:42:1.00001:4,4:4-4,4-4:21,16,0,5:4,21:3,5:266.998:326.675,113.385:0.0,0.0:0.0,1.32175e-06,1.0
+chr1	5779912	.	AATAATAATAATAAT	.	.	.	END=5779926;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.989972:5,5:5-5,5-5:10,7,0,0:5,10:NULL:100.348:366.612,131.36:0.0,0.0:2.77029e-22,0.00627996,0.993737	0/0:15:0.738405:5,5:5-5,5-5:5,10,0,0:5,5:NULL:112.525:326.675,113.385:0.29703,0.29703:1.91527e-11,0.178554,0.821514
+chr1	5780434	.	CATTGTGAGCATTGTGAGCATTGTGAG	.	.	.	END=5780460;RU=cattgtgag;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999298:3,3:3-3,3-3:13,17,0,3:3,13:2,3:230.502:366.612,131.36:0.0,0.0:6.7e-43,0.000502598,0.9995	0/0:26:0.999569:3,3:3-3,3-3:15,11,0,0:3,15:NULL:167.59:326.675,113.385:0.0,0.0:0.0,0.000368101,0.999636
+chr1	5781296	.	TTATTATTATTA	TTATTATTA	.	.	END=5781307;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99987:3,3:3-3,3-3:16,16,0,0:3,16:NULL:215.133:366.612,131.36:0.0,0.0:0.999926,7.53605e-05,1.81e-43	0/0:30:1.00001:4,4:4-4,4-4:20,8,0,2:4,20:3,2:164.757:326.675,113.385:0.0,0.0:0.0,3.46079e-06,1.0
+chr1	5783455	.	GTGGGTGGGTGG	GTGGGTGGGTGGGTGGGTGGGTGGGTGG	.	.	END=5783466;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.959332:7,7:7-7,7-7:8,3,0,0:7,8:NULL:63.0944:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/1:47:1.0:3,7:3-3,7-7:24,23,0,0:3,18|7,6:NULL:317.768:326.675,113.385:0.0,0.557277:0.0,2.32863e-16,1.0
+chr1	5785041	.	TAAATAAATAAA	.	.	.	END=5785052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999171:3,3:3-3,3-3:13,10,0,4:3,13:2,4:166.912:366.612,131.36:0.0,0.0:1.023e-42,0.000293774,0.999706	0/0:25:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:132.735:326.675,113.385:0.0,0.0:0.0,9.0504e-06,0.999994
+chr1	5785417	.	TTATTTATTTAT	.	.	.	END=5785428;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:191.362:366.612,131.36:0.0,0.0:0.0,5.39921e-08,1.0	0/0:52:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:296.537:326.675,113.385:0.0,0.0:0.0,1.65893e-09,1.0
+chr1	5791745	.	CACACACACACACA	CACACA,CACACACA	.	.	END=5791758;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.98971:3,4:3-4,3-4:6,27,0,0:3,2|4,4:NULL:277.703:366.612,131.36:0.422855,0.326282:0.999879,0.000123949,6.18505e-28	0/0:67:1.0:7,7:6-7,6-7:43,18,0,6:6,3|7,38|8,2:6,6:405.178:326.675,113.385:0.195027,0.195027:0.0,6.50369e-07,1.0
+chr1	5793084	.	AATAAATAAATA	.	.	.	END=5793095;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999877:3,3:3-3,3-3:17,13,0,2:3,17:2,2:202.902:366.612,131.36:0.0,0.0:0.0,6.08471e-05,0.999941	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:160.328:326.675,113.385:0.0,0.0:0.0,1.96478e-07,1.0
+chr1	5795883	.	TAAATAAATAAA	.	.	.	END=5795894;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:200.221:366.612,131.36:0.0,0.0:0.0,4.6765e-06,0.999995	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.643:326.675,113.385:0.0,0.0:0.0,8.64019e-08,1.0
+chr1	5796091	.	TTTGTTTTGTTTTGT	.	.	.	END=5796105;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999901:3,3:3-3,3-3:16,9,0,0:3,16:NULL:145.659:366.612,131.36:0.0,0.0:0.0,6.52105e-05,0.999934	0/0:38:1.0:3,3:3-3,3-3:30,8,0,0:3,30:NULL:194.535:326.675,113.385:0.0,0.0:0.0,4.90667e-09,1.0
+chr1	5796722	.	AATAAATAAATA	.	.	.	END=5796733;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:1-3,1-3:22,13,0,0:3,22:NULL:202.736:366.612,131.36:0.540126,0.540126:0.0,1.23798e-06,1.0	0/0:33:0.999991:3,3:2-3,2-3:18,14,0,0:3,18:NULL:203.111:326.675,113.385:0.35561,0.35561:0.0,1.86871e-05,0.999985
+chr1	5797431	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=5797454;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:1.0:5,5:5-5,5-5:35,10,0,3:5,35:2,1|4,2:256.075:366.612,131.36:0.0,0.0:1.0,1.1966e-10,0.0	0/0:36:1.0:6,6:4-6,4-6:23,6,0,5:6,23:4,3|5,2:186.325:326.675,113.385:0.410384,0.410384:0.0,4.34187e-07,1.0
+chr1	5799311	.	TATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA	.	.	END=5799348;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:9:0.486078:18,18:17-18,17-18:4,4,0,0:18,4:NULL:54.5028:366.612,131.36:0.374147,0.374147:0.76037,0.238382,0.0012729	1/0:14:0.982163:17,19:6-19,6-19:9,2,0,0:17,4|19,5:NULL:65.3645:326.675,113.385:4.72276,4.99312:1.88777e-05,0.990785,0.00921863
+chr1	5799404	.	TAAATAAATAAA	.	.	.	END=5799415;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.988207:3,3:3-3,3-3:10,8,0,0:3,10:NULL:113.088:366.612,131.36:0.0,0.0:9.73386e-29,0.00654213,0.993474	0/0:18:0.998939:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.1688:326.675,113.385:0.0,0.0:1.8887e-37,0.000540242,0.999462
+chr1	5800120	.	TTATTATTATTATTA	.	.	.	END=5800134;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999937:5,5:5-5,5-5:18,11,0,0:5,18:NULL:179.431:366.612,131.36:0.0,0.0:0.0,4.3944e-05,0.999957	0/0:22:0.99239:5,5:5-5,5-5:11,11,0,0:5,11:NULL:145.145:326.675,113.385:0.0,0.0:9.87934e-32,0.00529762,0.994716
+chr1	5803800	.	CAACAACAACAACAA	CAACAACAACAACAACAACAACAACAACAACAACAA	.	.	END=5803814;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999723:12,12:11-12,11-12:15,13,0,10:12,15:4,3|6,2|7,1|8,2|11,2:256.851:366.612,131.36:0.169767,0.169767:0.0,0.0,1.0	0/0:37:1.0:5,5:5-5,5-5:24,8,0,5:5,24:4,5:208.194:326.675,113.385:0.0,0.0:0.0,1.5221e-07,1.0
+chr1	5813834	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=5813884;RU=tct;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:14:0.279533:18,23:17-23,17-23:2,3,0,8:18,2:4,1|7,1|9,1|11,1|12,1|17,1|18,1|23,1:97.0994:366.612,131.36:1.15753,2.37116:1.86078e-27,9.98403e-06,0.999993	1/0:45:0.94456:16,17:16-17,17-17:12,23,0,10:16,3|17,9:4,1|7,1|9,1|10,1|11,2|13,1|14,1|15,1|16,1:356.573:326.675,113.385:0.469019,0.0:1.41439e-15,0.94468,0.0554052
+chr1	5813889	.	TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	TTCTT,TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	.	.	END=5813933;RU=ttctt;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/2:51:0.610104:9,12:9-9,11-13:9,22,0,20:9,9:3,2|4,2|5,1|6,4|7,3|8,5|11,2|12,1:399.269:326.675,113.385:0.0,0.613702:1e-45,9.28955e-22,1.0
+chr1	5819521	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=5819540;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.998514:6,6:6-6,6-6:14,23,0,5:6,14:2,1|3,1|4,1|5,2:314.068:366.612,131.36:0.0,0.0:0.0,0.000353151,0.999651	0/0:40:0.999981:5,5:5-5,5-5:18,15,0,7:5,18:2,1|3,4|4,2:261.639:326.675,113.385:0.0,0.0:0.0,1.39299e-05,0.999987
+chr1	5829633	.	TTCCTTCCTTCC	.	.	.	END=5829644;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.998494:3,3:3-3,3-3:13,14,0,0:3,13:NULL:182.139:366.612,131.36:0.0,0.0:1.5e-44,0.000928731,0.999074	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:244.365:326.675,113.385:0.0,0.0:0.0,5.32516e-08,1.0
+chr1	5831560	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATA	.	.	END=5831615;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0234766:1,1:1-3,1-3:0,10,0,0:NULL:NULL:87.0303:366.612,131.36:0.339533,0.339533:0.76147,0.231543,0.00702052	0/0:43:0.998937:14,14:9-15,9-15:13,13,0,15:14,13:4,1|5,1|8,3|9,3|11,1|12,1|13,5:282.937:326.675,113.385:1.39944,1.39944:8.61859e-31,0.000348108,0.999652
+chr1	5832533	.	AACAAACAAACA	AACAAACA	.	.	END=5832544;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0412102:2,2:1-3,1-3:0,16,0,0:NULL:NULL:145.95:366.612,131.36:0.587088,0.587088:0.137906,0.489938,0.372325	0/0:34:0.997564:3,3:3-3,3-3:13,21,0,0:3,13:NULL:243.631:326.675,113.385:0.0,0.0:2.98e-43,0.00208502,0.99792
+chr1	5833064	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=5833091;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.0:6,6:6-6,6-6:26,8,0,2:6,26:3,1|5,1:191.71:366.612,131.36:0.0,0.0:1.0,6.68227e-08,0.0	0/0:49:1.00001:7,7:7-7,7-7:23,16,0,10:7,23:3,2|4,2|5,2|6,4:319.451:326.675,113.385:0.0,0.0:0.0,4.69348e-07,1.0
+chr1	5836792	.	TTTTGTTTTGTTTTG	.	.	.	END=5836806;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.0532816:3,3:1-6,1-6:0,14,0,2:NULL:3,2:143.036:366.612,131.36:1.5536,1.5536:2.74641e-16,0.419007,0.581072	0/0:35:1.0:3,3:3-3,3-3:28,4,0,2:3,28:2,1|3,1:161.592:326.675,113.385:0.0,0.0:0.0,8.26137e-09,1.0
+chr1	5843531	.	GTTGTTGTTGTT	GTTGTTGTT	.	.	END=5843542;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.252266:3,3:2-4,2-4:2,17,0,0:3,2:NULL:166.713:366.612,131.36:0.665211,0.665211:0.577122,0.422964,1.17689e-06	0/0:28:0.999906:4,4:4-4,4-4:17,11,0,0:4,17:NULL:166.827:326.675,113.385:0.0,0.0:1.1e-43,6.42646e-05,0.99994
+chr1	5844583	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5844632;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.193242:25,25:22-25,22-25:2,10,0,0:25,2:NULL:100.105:366.612,131.36:1.12192,1.12192:0.0045807,0.480536,0.514971	0/0:34:0.348451:25,25:23-25,23-25:8,10,0,15:24,3|25,5:5,1|6,1|11,2|12,2|13,1|14,1|16,1|18,1|20,3|23,1|24,1:254.626:326.675,113.385:0.561658,0.561658:6.94529e-05,0.630722,0.369266
+chr1	5861282	.	ATATATATATAT	AT	.	.	END=5861293;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.00357437:1,1:1-7,1-7:0,7,0,0:NULL:NULL:64.8289:366.612,131.36:2.00328,2.00328:0.0589627,0.398793,0.542412	0/0:23:0.999911:6,6:6-6,6-6:17,6,0,0:6,17:NULL:118.354:326.675,113.385:0.0,0.0:2.05423e-27,5.61991e-05,0.999947
+chr1	5863544	.	GGGTGGGTGGGT	GGGT	.	.	END=5863555;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.0278135:1,1:3-3,3-3:0,0,0,0:NULL:NULL:-25.0:366.612,131.36:0.0,0.0:0.111169,0.444566,0.444358	0/0:36:0.849824:3,3:3-3,3-3:6,28,0,2:3,6:2,2:289.551:326.675,113.385:0.278639,0.278639:8.24928e-16,0.0757857,0.924308
+chr1	5864371	.	ATTAATTAATTA	ATTAATTAATTAATTA	.	.	END=5864382;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.992643:4,4:4-4,4-4:11,21,0,0:4,11:NULL:235.41:366.612,131.36:0.0,0.0:1.1e-44,0.00467797,0.995334	0/0:26:0.999979:3,3:3-3,3-3:18,8,0,0:3,18:NULL:146.274:326.675,113.385:0.0,0.0:0.0,1.68976e-05,0.999986
+chr1	5865370	.	TCTCTCTCTCTCTC	TCTC	.	.	END=5865383;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0027445:2,2:1-4,1-4:0,6,0,0:NULL:NULL:53.8209:366.612,131.36:0.789724,0.789724:0.0679048,0.427125,0.505172	0/0:33:1.00001:7,7:7-8,7-8:20,8,0,4:7,20:4,1|5,3:182.858:326.675,113.385:0.253975,0.253975:7.068e-42,5.16475e-06,0.999995
+chr1	5868012	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5868059;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.34883:30,30:27-30,27-30:3,9,0,8:30,3:10,1|11,1|15,1|17,1|18,1|25,1|27,2:157.6:366.612,131.36:0.5093,0.5093:0.0,0.0,1.0	0/0:38:0.848199:24,24:22-24,22-24:7,13,0,16:24,7:7,1|9,1|10,1|13,2|14,2|15,3|16,1|21,1|22,1|23,2|24,1:283.199:326.675,113.385:0.467344,0.467344:4.72747e-16,0.0181405,0.9819
+chr1	5871062	.	TATTTTATTTTATTT	.	.	.	END=5871076;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.864268:3,3:3-3,3-3:6,0,0,0:3,6:NULL:23.6225:366.612,131.36:0.0,0.0:1.2182e-18,0.0541899,0.945893	0/0:32:0.999792:3,3:3-3,3-3:15,15,0,2:3,15:2,2:213.109:326.675,113.385:0.0,0.0:3e-45,0.000128777,0.999873
+chr1	5877999	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=5878042;RU=gata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:22:0.950424:12,12:12-13,12-13:9,10,0,2:12,9:3,2:143.371:366.612,131.36:0.469019,0.469019:2.10753e-26,0.0189762,0.981064	1/1:37:0.999836:10,10:10-10,10-10:16,15,0,6:10,16:5,1|7,2|8,1|9,2:251.085:326.675,113.385:0.0,0.0:0.999909,9.38047e-05,6.43078e-23
+chr1	5882501	.	TAAATAAATAAA	.	.	.	END=5882512;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:227.145:366.612,131.36:0.0,0.0:0.0,7.88834e-07,1.0	0/0:46:1.0:3,3:3-3,3-3:36,10,0,0:3,36:NULL:229.319:326.675,113.385:0.0,0.0:0.0,1.04705e-10,1.0
+chr1	5887687	.	AGAATAGAATAGAAT	.	.	.	END=5887701;RU=agaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:21,17,0,0:3,21:NULL:243.932:366.612,131.36:0.0,0.0:0.0,4.85605e-06,0.999995	0/0:41:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:220.324:326.675,113.385:0.0,0.0:0.0,6.13223e-09,1.0
+chr1	5889757	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5889788;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.56051:19,20:18-19,18-21:12,21,0,13:18,4|19,8:5,2|6,1|7,3|13,1|14,1|16,1|18,2|20,2:371.436:366.612,131.36:0.298675,0.638748:0.0,9.94627e-11,1.0	0/0:71:0.995842:16,16:16-17,16-17:26,18,0,25:16,23|17,3:5,1|6,1|7,2|8,1|9,2|10,1|11,4|12,3|13,3|14,4|15,3:487.37:326.675,113.385:0.284901,0.284901:5.44931e-31,2.91005e-07,1.0
+chr1	5890307	.	ACAAAACAAAACAAA	.	.	.	END=5890321;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999566:3,3:3-3,3-3:15,24,0,0:3,15:NULL:282.549:366.612,131.36:0.0,0.0:0.0,0.000391388,0.999613	0/0:37:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:227.577:326.675,113.385:0.0,0.0:0.0,2.32011e-06,1.0
+chr1	5896268	.	TAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=5896295;RU=taga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.620046:11,11:7-11,7-11:4,11,0,5:11,4:8,3|9,1|11,1:157.745:366.612,131.36:1.2298,1.2298:0.0,0.0275314,0.972524	0/0:40:1.00001:7,7:7-7,7-7:22,14,0,4:7,22:3,1|4,1|5,1|6,1:252.308:326.675,113.385:0.0,0.0:2.80159e-28,3.30435e-06,1.0
+chr1	5896295	.	AGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	.	END=5896330;RU=agac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.568114:9,9:8-9,8-9:4,10,0,5:9,4:5,2|6,1|7,2:145.0:366.612,131.36:0.484441,0.484441:4.39201e-09,0.215137,0.784907	0/0:38:0.999706:9,9:9-9,9-9:15,15,0,8:9,15:5,2|6,1|7,3|8,2:261.206:326.675,113.385:0.0,0.0:1.00938e-31,0.000138485,0.999864
+chr1	5897769	.	ATATATATATAT	ATATATATATATAT	.	.	END=5897780;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:1.0:6,7:6-6,6-8:30,25,0,0:6,16|7,11|8,3:NULL:370.665:366.612,131.36:0.0,0.263076:2.2259e-32,1.54871e-13,1.0	0/0:49:0.99999:6,6:6-6,6-6:32,15,0,0:6,29|7,3:NULL:275.497:326.675,113.385:0.0990099,0.0990099:3.05501e-34,1.71758e-08,1.0
+chr1	5897783	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5897826;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.97053:23,23:22-24,22-24:19,23,0,11:22,3|23,14|24,2:4,1|5,1|9,1|10,1|14,1|15,1|19,2|20,1|21,1|22,1:391.072:366.612,131.36:0.701085,0.701085:1.6511e-30,3.98863e-05,0.999963	0/0:66:0.97549:22,22:19-23,19-23:16,22,0,25:22,14|23,2:5,2|6,1|7,3|9,2|10,4|11,3|12,2|13,3|14,2|19,2|21,1:474.739:326.675,113.385:0.657354,0.657354:1.16935e-16,0.000428123,0.999575
+chr1	5897969	.	ACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=5897986;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:49:0.471053:9,10:9-9,8-10:17,18,0,14:8,2|9,15:4,1|6,2|7,1|8,7|9,2|10,1:358.011:366.612,131.36:0.0,0.717122:3.53e-43,4.02365e-06,0.999995	0/0:55:0.944427:9,9:7-19,7-19:29,17,0,8:8,3|9,26:6,4|7,2|8,1|16,1:361.609:326.675,113.385:3.5902,3.5902:1.1e-44,5.74913e-05,0.999942
+chr1	5898251	.	TTGTTGTTGTTG	.	.	.	END=5898262;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:29,10,0,0:4,29:NULL:204.271:366.612,131.36:0.0,0.0:0.0,1.64728e-08,1.0	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:178.491:326.675,113.385:0.0,0.0:0.0,1.01053e-05,0.999993
+chr1	5899946	.	CATACATACATACATACATACATACATACATACATACATA	CATACATACATACATACATACATACATACATACATA	.	.	END=5899985;RU=cata;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.524396:9,9:8-9,8-9:14,12,0,9:8,3|9,11:3,1|5,3|6,1|7,3|8,1:244.737:366.612,131.36:0.481803,0.481803:0.999697,0.000306133,1.72282e-16	0/0:43:0.999909:10,10:10-10,10-10:17,13,0,12:10,17:3,1|4,1|5,2|6,1|7,3|8,3|9,1:279.428:326.675,113.385:0.0990099,0.0990099:2.73826e-25,4.24703e-05,0.999957
+chr1	5899987	.	GTATGTATGTAT	.	.	.	END=5899998;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999084:3,3:3-3,3-3:13,13,0,0:3,13:NULL:172.571:366.612,131.36:0.0,0.0:2.75199e-34,0.000516341,0.999485	0/0:29:1.0:3,3:3-3,3-3:19,10,0,0:3,19:NULL:170.457:326.675,113.385:0.0,0.0:0.0,1.08231e-05,0.999993
+chr1	5902689	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=5902718;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.872688:16,16:12-16,12-16:6,21,0,15:16,6:6,2|8,1|9,3|10,1|11,2|12,1|14,4|15,1:345.735:366.612,131.36:1.43308,1.43308:1.11668e-19,0.0185593,0.981481	0/0:49:0.997902:15,15:13-15,13-15:20,14,0,13:13,2|15,18:4,2|6,1|7,1|8,1|11,2|12,2|13,3|14,1:318.723:326.675,113.385:0.833449,0.833449:1.42274e-22,0.00208513,0.99792
+chr1	5903515	.	TGTTTTGTTTTGTTT	.	.	.	END=5903529;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999941:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.876:366.612,131.36:0.0,0.0:0.0,5.57718e-05,0.999948	0/0:20:0.999876:3,3:3-3,3-3:16,4,0,0:3,16:NULL:103.791:326.675,113.385:0.0,0.0:0.0,6.71815e-05,0.999934
+chr1	5907759	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5907810;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.0838707:25,25:23-26,23-26:0,30,0,12:NULL:4,1|8,1|11,1|14,1|15,1|18,2|21,2|23,1|24,1|25,1:364.098:366.612,131.36:0.655263,0.655263:0.251683,0.543114,0.205209	1/0:58:0.942176:25,26:24-26,25-26:7,26,0,24:25,4|26,3:4,1|5,2|6,1|7,3|8,1|10,1|11,1|12,2|13,2|16,1|19,2|20,1|22,1|23,1|24,1|25,3:460.169:326.675,113.385:0.314035,0.429525:0.0225164,0.950009,0.02757
+chr1	5912141	.	TAAATAAATAAA	.	.	.	END=5912152;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:22,16,0,0:3,22:NULL:237.723:366.612,131.36:0.0,0.0:0.0,3.11145e-06,1.0	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:314.115:326.675,113.385:0.0,0.0:0.0,1.17494e-10,1.0
+chr1	5915677	.	CACCACCACCACCAC	.	.	.	END=5915691;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:93:1.0:5,5:5-5,5-5:61,27,0,4:5,61:3,2|4,2:522.376:366.612,131.36:0.0,0.0:0.0,2.71225e-18,1.0	0/0:95:1.0:5,5:5-5,5-5:75,14,0,5:5,75:4,5:454.381:326.675,113.385:0.0,0.0:0.0,8.44432e-23,1.0
+chr1	5915768	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5915801;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:73:0.780363:20,20:20-21,20-21:34,20,0,18:18,2|19,5|20,22|21,5:4,1|5,1|6,3|9,3|10,1|11,1|12,1|14,1|15,2|16,2|18,2:516.966:366.612,131.36:0.451989,0.451989:0.0,8.05231e-11,1.0	0/0:85:0.999597:17,17:17-22,17-22:41,25,0,17:16,7|17,30|18,4:4,2|8,1|9,2|10,2|12,1|13,3|14,3|16,2|22,1:583.029:326.675,113.385:2.24099,2.24099:5.98141e-35,8.34372e-06,0.999994
+chr1	5918994	.	CCCTCCCTCCCT	.	.	.	END=5919005;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999912:3,3:3-3,3-3:16,13,0,0:3,16:NULL:186.507:366.612,131.36:0.0,0.0:0.0,6.56808e-05,0.999934	0/0:21:0.999354:3,3:3-3,3-3:14,7,0,0:3,14:NULL:117.558:326.675,113.385:0.0,0.0:1e-45,0.00039642,0.999606
+chr1	5919625	.	ATATATATATAT	.	.	.	END=5919636;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999156:6,6:6-6,6-6:14,22,0,0:6,14:NULL:260.754:366.612,131.36:0.0,0.0:2.20629e-24,0.000583008,0.999422	0/0:29:0.999622:6,6:6-7,6-7:15,13,0,0:6,15:NULL:171.564:326.675,113.385:0.195027,0.195027:5.98538e-26,0.000235845,0.999766
+chr1	5919950	.	GATGATGATGAT	.	.	.	END=5919961;RU=gat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999713:4,4:4-4,4-4:16,15,0,0:4,16:NULL:207.353:366.612,131.36:0.0,0.0:1.2002e-40,0.000204791,0.999797	0/0:34:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:196.784:326.675,113.385:0.0,0.0:0.0,8.43741e-07,1.0
+chr1	5922252	.	ATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATAT	.	.	END=5922279;RU=at;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.646279:16,17:16-18,17-18:6,6,0,0:16,2|17,4:NULL:90.1045:366.612,131.36:0.617841,0.304526:3.00658e-13,0.0144617,0.98557	0/0:17:0.620937:14,14:13-15,13-15:5,10,0,0:14,5:NULL:114.364:326.675,113.385:0.421694,0.421694:0.000215381,0.241347,0.758457
+chr1	5926025	.	TCTTTCTTTCTT	.	.	.	END=5926036;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:194.3:366.612,131.36:0.0,0.0:0.0,1.13297e-05,0.999993	0/0:31:0.999998:3,3:3-3,3-3:18,10,0,3:3,18:2,3:188.06:326.675,113.385:0.0,0.0:0.0,1.04438e-05,0.999993
+chr1	5927629	.	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	.	.	END=5927700;RU=gatgaa;PERIOD=6;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:92:0.497956:11,11:10-11,10-11:15,43,0,34:10,2|11,13:2,1|3,1|4,2|5,5|6,6|7,6|8,2|9,6|10,5:718.283:366.612,131.36:0.481803,0.481803:0.999993,1.10196e-05,4.5566e-31	0/0:52:0.844477:12,12:9-12,9-12:6,27,0,19:12,6:2,2|3,3|4,2|5,2|6,1|7,1|8,1|9,4|11,3:411.108:326.675,113.385:0.619742,0.619742:7.03679e-18,0.137528,0.862561
+chr1	5927964	.	ACCCACCCACCC	.	.	.	END=5927975;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:24,20,0,4:3,24:2,4:310.166:366.612,131.36:0.0,0.0:0.0,1.91414e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.966:326.675,113.385:0.0,0.0:0.0,6.46021e-06,0.999995
+chr1	5929823	.	TTTGTTTGTTTG	.	.	.	END=5929834;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,20,0,0:3,29:NULL:296.826:366.612,131.36:0.0,0.0:0.0,9.32122e-09,1.0	0/0:20:0.999841:3,3:3-3,3-3:16,2,0,2:3,16:2,2:98.7639:326.675,113.385:0.0,0.0:0.0,6.37898e-05,0.99994
+chr1	5930224	.	GTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=5930247;RU=gtt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:8,8:8-8,8-8:27,12,0,4:8,27:4,2|5,1|7,1:252.24:366.612,131.36:0.0,0.0:0.0,4.44333e-08,1.0	0/0:46:1.0:8,8:8-8,8-8:27,13,0,5:8,27:3,1|5,4:263.401:326.675,113.385:0.19802,0.19802:0.0,9.0939e-08,1.0
+chr1	5934390	.	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	.	.	END=5934474;RU=tttcc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.301504:14,14:11-14,11-14:2,14,0,21:14,2:3,2|4,2|5,3|6,2|7,2|8,1|9,2|10,3|11,2|12,1|13,1:286.328:366.612,131.36:0.676608,0.676608:0.927216,0.0728785,3.47771e-10	0/0:24:0.199924:17,17:14-17,14-17:2,11,0,11:17,2:3,1|4,2|6,1|9,2|10,3|12,1|13,1:185.373:326.675,113.385:1.49816,1.49816:8.06284e-05,0.626446,0.373523
+chr1	5940366	.	AATTAATTAATT	.	.	.	END=5940377;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999654:3,3:3-3,3-3:15,10,0,0:3,15:NULL:147.578:366.612,131.36:0.0,0.0:0.0,0.000189184,0.999812	0/0:25:0.999916:3,3:3-3,3-3:17,8,0,0:3,17:NULL:143.032:326.675,113.385:0.0,0.0:0.0,5.15884e-05,0.999949
+chr1	5940451	.	TTTGTTTTGTTTTGT	.	.	.	END=5940465;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999994:3,3:3-3,3-3:19,8,0,0:3,19:NULL:147.155:366.612,131.36:0.0,0.0:0.0,1.23806e-05,0.999987	0/0:36:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:215.504:326.675,113.385:0.0,0.0:0.0,1.34636e-06,1.0
+chr1	5941150	.	ACACACACACAC	.	.	.	END=5941161;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:20,15,0,2:6,20:4,1|5,1:232.608:366.612,131.36:0.0,0.0:3.66e-43,3.9473e-06,0.999995	0/0:43:1.0:6,6:6-6,6-6:20,20,0,3:6,20:4,1|5,2:278.91:326.675,113.385:0.0,0.0:5.56e-43,3.98785e-06,0.999995
+chr1	5942017	.	ACAAAACAAAACAAA	.	.	.	END=5942031;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:166.874:366.612,131.36:0.0,0.0:0.0,1.36527e-06,1.0	0/0:20:0.999954:3,3:3-3,3-3:17,1,0,2:3,17:2,1|3,1:90.8318:326.675,113.385:0.0,0.0:0.0,1.14842e-05,0.999988
+chr1	5945567	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5945590;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999936:6,6:5-6,5-6:17,17,0,11:6,17:2,2|3,2|4,4|5,3:307.495:366.612,131.36:0.253975,0.253975:0.0,3.38207e-05,0.99997	0/0:45:1.00001:6,6:6-6,6-6:22,18,0,5:6,22:3,1|4,1|5,3:292.462:326.675,113.385:0.0,0.0:0.0,9.82135e-07,1.0
+chr1	5946795	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5946832;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.472493:22,22:21-22,21-22:12,9,0,11:21,4|22,8:6,1|7,1|8,1|11,2|12,1|13,1|14,1|16,1|20,2:231.246:366.612,131.36:0.489073,0.489073:6.2e-44,7.10627e-05,0.999932	0/0:46:0.991405:19,19:4-21,4-21:14,19,0,9:18,2|19,12:5,1|6,1|7,1|8,1|9,1|10,1|12,1|17,1|19,1:315.022:326.675,113.385:7.29921,7.29921:2.95628e-20,0.00747542,0.992543
+chr1	5947011	.	TCCATCCATCCA	.	.	.	END=5947022;RU=tcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:27,17,0,0:3,27:NULL:260.132:366.612,131.36:0.0,0.0:0.0,3.17725e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:31,11,0,0:3,31:NULL:223.229:326.675,113.385:0.0,0.0:0.0,2.78806e-09,1.0
+chr1	5953047	.	TCATTCATTCATTCAT	.	.	.	END=5953062;RU=tcat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.998895:4,4:3-4,3-4:14,21,0,3:4,14:3,3:275.253:366.612,131.36:0.412766,0.412766:0.0,0.000556861,0.999446	0/0:36:1.00001:4,4:4-4,4-4:22,12,0,2:4,22:3,2:214.53:326.675,113.385:0.0,0.0:0.0,1.25837e-06,1.0
+chr1	5953771	.	ATTTTATTTTATTTT	.	.	.	END=5953785;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:215.118:366.612,131.36:0.0,0.0:0.0,7.59821e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:22,17,0,2:3,22:2,2:259.852:326.675,113.385:0.0,0.0:0.0,1.55559e-06,1.0
+chr1	5956109	.	AGAGAGAGAGAG	.	.	.	END=5956120;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999051:6,6:6-6,6-6:14,17,0,0:6,14:NULL:213.09:366.612,131.36:0.0,0.0:1.35846e-32,0.000674371,0.999331	0/0:37:1.0:6,6:4-6,4-6:19,14,0,2:6,19:4,1|5,1:211.292:326.675,113.385:0.699966,0.699966:1.1e-44,1.05018e-05,0.999993
+chr1	5956842	.	TTCTTTCTTTCT	.	.	.	END=5956853;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:257.7:366.612,131.36:0.0,0.0:0.0,2.2876e-10,1.0	0/0:38:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:236.194:326.675,113.385:0.0,0.0:0.0,2.68644e-06,1.0
+chr1	5958262	.	GAAGGAAGGAAGGAAGGAAG	.	.	.	END=5958281;RU=gaag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:22,15,0,0:5,22:NULL:229.447:366.612,131.36:0.0,0.0:0.0,3.26586e-06,1.0	0/0:47:1.0:5,5:5-5,5-5:27,16,0,4:5,27:2,1|4,3:283.017:326.675,113.385:0.0,0.0:0.0,4.85953e-08,1.0
+chr1	5963266	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=5963305;RU=gttt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:10,10:10-10,10-10:28,19,0,9:10,28:3,1|4,1|5,2|6,2|7,1|8,2:366.047:366.612,131.36:0.0,0.0:0.0,8.63647e-08,1.0	0/0:53:1.0:10,10:10-10,10-10:24,12,0,17:10,24:3,1|4,2|5,3|6,1|8,5|9,5:336.913:326.675,113.385:0.0,0.0:0.0,2.83696e-07,1.0
+chr1	5964606	.	ATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT	.	.	END=5964619;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.886418:12,13:7-13,7-14:14,23,0,0:10,2|11,2|12,4|13,6:NULL:290.803:366.612,131.36:1.66142,1.61043:1.54621e-36,9.18377e-06,0.999993	0/0:27:0.836108:7,7:4-7,4-7:14,10,0,0:6,3|7,11:NULL:160.179:326.675,113.385:0.862467,0.862467:2.47795e-12,0.162866,0.837207
+chr1	5964620	.	ACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC	.	.	END=5964641;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.187232:17,17:11-15,11-15:5,29,0,4:17,5:4,1|8,2|9,1:321.414:366.612,131.36:1.56711,1.56711:4.96889e-16,0.413864,0.58621	0/0:35:0.445205:11,11:9-11,9-11:12,14,0,6:10,3|11,9:4,1|5,1|6,1|9,2|10,1:234.396:326.675,113.385:0.708457,0.708457:2.48055e-09,0.553166,0.44694
+chr1	5969864	.	CCACCCACCCACCCAC	.	.	.	END=5969879;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:4,4:4-4,4-4:33,31,0,3:4,33:2,1|3,2:441.455:366.612,131.36:0.0,0.0:0.0,4.1973e-10,1.0	0/0:57:1.0:4,4:4-4,4-4:33,22,0,2:4,33:3,2:343.641:326.675,113.385:0.0,0.0:0.0,6.62047e-10,1.0
+chr1	5971172	.	TGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTT	.	.	END=5971195;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999887:4,4:4-4,4-4:16,23,0,2:4,16:2,1|3,1:291.383:366.612,131.36:0.0,0.0:0.999985,1.85909e-05,0.0	0/0:49:0.99981:6,6:5-6,5-6:28,17,0,4:5,2|6,26:2,1|3,1|4,1|5,1:310.005:326.675,113.385:0.298675,0.298675:0.0,0.000194253,0.99981
+chr1	5973006	.	ACACACACACAC	ACACACACACACACAC	.	.	END=5973017;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.937908:8,8:7-8,7-8:15,17,0,2:7,2|8,13:6,2:237.838:366.612,131.36:0.40582,0.40582:0.0,8.97946e-05,0.999911	0/0:18:0.983031:6,6:6-6,6-6:9,6,0,3:6,9:5,3:112.405:326.675,113.385:0.0,0.0:3.2648e-20,0.00572335,0.994293
+chr1	5974638	.	AAATAAATAAAT	.	.	.	END=5974649;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.994209:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.3759:366.612,131.36:0.0,0.0:2.8099e-36,0.00287796,0.997132	0/0:22:0.736692:3,3:1-3,1-3:5,17,0,0:3,5:NULL:171.101:326.675,113.385:0.507951,0.507951:1.13701e-16,0.20747,0.792576
+chr1	5974827	.	ATAATAATAATAATAATA	.	.	.	END=5974844;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.949345:6,6:4-6,4-6:8,0,0,2:6,8:3,2:47.1122:366.612,131.36:0.957892,0.957892:8.02138e-18,0.0264945,0.973556	0/0:23:0.996343:6,6:6-6,6-6:11,8,0,4:6,11:3,1|4,2|5,1:152.714:326.675,113.385:0.0,0.0:3.15835e-24,0.00184095,0.998163
+chr1	5974849	.	AAATTAAATTAAATTAAATT	AAATTAAATTAAATT	.	.	END=5974868;RU=aaatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.0334915:3,3:3-4,3-4:0,0,0,2:NULL:3,2:14.0982:366.612,131.36:0.44763,0.44763:0.0669411,0.400408,0.532829	0/0:21:0.964528:4,4:4-4,4-4:8,11,0,2:4,8:2,2:149.833:326.675,113.385:0.19802,0.19802:4.66856e-25,0.0264723,0.973578
+chr1	5976547	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5976566;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997467:4,4:4-4,4-4:12,11,0,2:4,12:3,2:157.502:366.612,131.36:0.0,0.0:1.78561e-39,0.0011616,0.998845	0/0:22:0.993463:4,4:4-4,4-4:10,10,0,2:4,10:3,2:140.83:326.675,113.385:0.0,0.0:3.90347e-33,0.00345787,0.99655
+chr1	5978570	.	AAAGAAAGAAAG	.	.	.	END=5978581;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:30,15,0,2:3,30:2,2:271.734:366.612,131.36:0.0,0.0:0.0,5.8207e-09,1.0	0/0:37:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:187.058:326.675,113.385:0.0,0.0:0.0,1.19858e-08,1.0
+chr1	5981538	.	ATAATAATAATA	.	.	.	END=5981549;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.993889:4,4:4-4,4-4:11,13,0,0:4,11:NULL:163.313:366.612,131.36:0.0,0.0:1.29433e-29,0.00370406,0.996307	0/0:24:0.9988:4,4:4-4,4-4:13,11,0,0:4,13:NULL:148.367:326.675,113.385:0.0,0.0:2.02401e-34,0.000860891,0.999142
+chr1	5990630	.	TGGATTATCTGGATTATCTGGATTATC	TGGATTATC	.	.	END=5990656;RU=tggattatc;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.220125:1,1:1-2,1-2:0,19,0,0:NULL:NULL:165.643:366.612,131.36:0.311527,0.311527:0.586116,0.37447,0.0395355	0/0:42:1.0:3,3:3-3,3-3:22,16,0,4:3,22:2,4:261.29:326.675,113.385:0.0,0.0:0.0,2.32205e-06,1.0
+chr1	5990673	.	ACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5990684;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.322577:20,20:19-20,19-20:2,14,0,6:20,2:4,1|8,2|9,1|12,1|20,1:184.95:366.612,131.36:0.661813,0.661813:0.0,0.0,1.0	0/0:36:1.0:6,6:6-6,6-6:20,13,0,3:6,20:4,1|5,2:222.117:326.675,113.385:0.0,0.0:1.71735e-39,4.97916e-06,0.999995
+chr1	5991174	.	AAAACAAAACAAAAC	AAAAC	.	.	END=5991188;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0600654:1,1:1-3,1-3:0,10,0,0:NULL:NULL:92.4002:366.612,131.36:0.485855,0.485855:0.185855,0.498351,0.315903	0/0:23:0.999999:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.705:326.675,113.385:0.0,0.0:0.0,9.51013e-06,0.999993
+chr1	5999275	.	GGGTGGGTGGGT	GGGT	.	.	END=5999286;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.00981823:1,1:1-2,1-2:0,7,0,0:NULL:NULL:58.3651:366.612,131.36:0.469019,0.469019:0.0380205,0.352752,0.609338	0/0:53:0.932367:3,3:3-3,3-3:7,44,0,2:3,7:2,2:430.394:326.675,113.385:0.278639,0.278639:6.02717e-20,0.0580408,0.942047
+chr1	6002341	.	AAATAAATAAAT	AAAT	.	.	END=6002352;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0846653:1,1:1-1,1-1:0,18,0,0:NULL:NULL:164.799:366.612,131.36:0.139319,0.139319:0.190566,0.5221,0.287427	0/0:14:0.990347:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6385:326.675,113.385:0.0,0.0:9.0193e-33,0.00438464,0.995628
+chr1	6003957	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTG,TTTGTTTG	.	.	END=6003980;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.0340808:1,2:1-3,1-3:0,9,0,0:NULL:NULL:82.4126:366.612,131.36:0.86417,0.863602:0.273918,0.532388,0.193697	0/0:16:0.993524:6,6:6-6,6-6:11,5,0,0:6,11:NULL:89.6854:326.675,113.385:0.0,0.0:5.95831e-34,0.00386801,0.996142
+chr1	6007179	.	TGTGTGTGTGTGTG	.	.	.	END=6007192;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:7,7:7-7,7-7:21,10,0,0:7,21:NULL:175.581:366.612,131.36:0.0990099,0.0990099:6.33055e-39,4.40377e-06,0.999995	0/0:23:0.999991:7,7:7-7,7-7:19,4,0,0:7,19:NULL:113.025:326.675,113.385:0.0,0.0:2.37576e-35,1.83346e-05,0.999985
+chr1	6008813	.	CACACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6008864;RU=ca;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0685445:24,24:21-24,21-24:0,10,0,16:NULL:7,2|9,1|11,2|12,2|14,1|15,1|16,1|20,2|22,1|23,1|24,2:215.675:366.612,131.36:1.34544,1.34544:0.376805,0.480889,0.142383	0/0:24:0.550003:26,26:25-26,25-26:5,10,0,8:26,5:6,1|7,1|8,1|11,3|13,1|16,1:179.894:326.675,113.385:0.35561,0.35561:3.90968e-06,0.288238,0.711762
+chr1	6010711	.	ATTTATTTATTT	.	.	.	END=6010722;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.614864:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6359:366.612,131.36:0.0,0.0:8.92207e-14,0.153957,0.846123	0/0:20:0.999907:3,3:3-3,3-3:16,4,0,0:3,16:NULL:100.387:326.675,113.385:0.0,0.0:0.0,5.41553e-05,0.999948
+chr1	6016751	.	CATACATACATA	.	.	.	END=6016762;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:186.522:366.612,131.36:0.0,0.0:0.0,2.81512e-07,1.0	0/0:20:0.999492:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.222:326.675,113.385:0.0,0.0:0.0,0.000290229,0.999712
+chr1	6022355	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=6022386;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0275954:1,1:1-4,1-4:0,12,0,0:NULL:NULL:111.669:366.612,131.36:0.805213,0.805213:0.541162,0.403616,0.0553774	0/0:59:1.0:8,8:8-8,8-8:24,21,0,12:8,24:3,6|4,1|5,2|6,2|7,1:372.745:326.675,113.385:0.0990099,0.0990099:0.0,5.46256e-07,1.0
+chr1	6023295	.	TTATTTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTAT	.	.	END=6023322;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999751:5,5:5-5,5-5:16,14,0,2:5,16:4,2:209.297:366.612,131.36:0.0,0.0:0.999948,5.54584e-05,1.1957e-41	0/0:28:0.995703:7,7:7-7,7-7:11,11,0,6:7,11:2,2|3,2|5,1|6,1:183.374:326.675,113.385:0.0,0.0:5.7497e-34,0.00238712,0.997618
+chr1	6023967	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=6023984;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.98759:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.337:366.612,131.36:0.0,0.0:3.97564e-34,0.00838731,0.99163	0/0:36:0.999955:3,3:3-3,3-3:18,18,0,0:3,18:NULL:235.55:326.675,113.385:0.0,0.0:0.0,5.44966e-05,0.999948
+chr1	6025872	.	TTTATTTATTTATTTATTTATTTATTTA	TTTATTTATTTATTTATTTATTTA	.	.	END=6025899;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.975625:6,6:5-6,5-6:10,14,0,3:6,10:2,1|3,1|5,1:200.967:366.612,131.36:0.442564,0.442564:0.993257,0.00675705,8.68775e-18	0/0:15:0.961678:7,7:7-7,7-7:8,5,0,2:7,8:3,1|6,1:92.9615:326.675,113.385:0.0,0.0:1.86636e-19,0.0193302,0.980711
+chr1	6025930	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6025961;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:15:0.0335167:23,23:23-26,23-26:0,13,0,0:NULL:NULL:131.818:366.612,131.36:0.917112,0.917112:0.0,0.0,1.0	1/0:16:0.66936:15,16:15-17,16-16:10,1,0,4:15,3|16,7:5,1|11,1|13,1|14,1:90.1498:326.675,113.385:0.59653,0.139319:1.76427e-06,0.672544,0.327468
+chr1	6033005	.	TAAATAAATAAA	.	.	.	END=6033016;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:23,12,0,3:3,23:2,3:225.16:366.612,131.36:0.0,0.0:0.0,6.25145e-07,1.0	0/0:23:0.999932:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.95:326.675,113.385:0.0,0.0:0.0,3.9076e-05,0.999963
+chr1	6033244	.	ATACATACATACATACATACATACATACATACATAC	ATACATACATACATACATACATAC,ATACATACATACATACATACATACATAC	.	.	END=6033279;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.902238:6,7:6-7,7-7:8,20,0,5:6,2|7,6:2,1|3,2|5,2:264.045:366.612,131.36:0.478946,0.0990099:0.999545,0.000455991,4.64201e-20	0/0:18:0.906221:9,9:9-9,9-9:7,8,0,3:9,7:3,1|4,1|7,1:124.6:326.675,113.385:0.29703,0.29703:3.74206e-17,0.0603248,0.939766
+chr1	6033357	.	ATATATATATATATAT	.	.	.	END=6033372;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999213:8,8:8-8,8-8:14,15,0,0:8,14:NULL:202.918:366.612,131.36:0.0,0.0:7.41025e-23,0.000450359,0.999552	0/0:14:0.987169:8,8:8-8,8-8:10,4,0,0:8,10:NULL:77.138:326.675,113.385:0.0,0.0:2.36841e-16,0.00686831,0.99315
+chr1	6034894	.	GGCAGGCAGGCAGGCA	.	.	.	END=6034909;RU=ggca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.990581:4,4:4-4,4-4:11,20,0,0:4,11:NULL:229.918:366.612,131.36:0.0,0.0:5.80723e-36,0.00742497,0.992595	0/0:19:0.967518:4,4:4-4,4-4:8,9,0,2:4,8:3,2:131.181:326.675,113.385:0.0,0.0:2.16302e-26,0.0180274,0.98201
+chr1	6041090	.	AAAATAAAATAAAAT	.	.	.	END=6041104;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999995:3,3:3-3,3-3:20,23,0,0:3,20:NULL:296.664:366.612,131.36:0.0,0.0:0.0,1.48067e-05,0.999987	0/0:52:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:317.917:326.675,113.385:0.0,0.0:0.0,1.53151e-08,1.0
+chr1	6041134	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6041161;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999963:7,7:5-7,5-7:18,17,0,5:7,18:3,1|5,3|6,1:268.322:366.612,131.36:0.597351,0.597351:0.0,3.16593e-05,0.999971	0/0:53:1.0:7,7:7-7,7-7:28,16,0,8:7,28:2,2|3,3|5,1|6,2:317.829:326.675,113.385:0.278639,0.278639:0.0,3.35055e-08,1.0
+chr1	6041922	.	TTGGTTTGGTTTGGTTTGGT	TTGGTTTGGTTTGGTTTGGTTTGGT	.	.	END=6041941;RU=ttggt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999293:5,5:3-5,3-5:13,22,0,6:5,13:2,1|4,4|5,1:295.978:366.612,131.36:0.863148,0.863148:0.0,6.90972e-05,0.999933	0/0:34:1.0:4,4:4-4,4-4:19,10,0,5:4,19:2,4|3,1:200.289:326.675,113.385:0.0,0.0:0.0,7.07621e-06,0.999994
+chr1	6041960	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=6041977;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999493:3,3:3-3,3-3:14,20,0,0:3,14:NULL:236.201:366.612,131.36:0.0,0.0:0.0,0.000392877,0.999607	0/0:27:1.0:3,3:3-3,3-3:23,4,0,0:3,23:NULL:128.968:326.675,113.385:0.0,0.0:0.0,5.73006e-07,1.0
+chr1	6042004	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	.	END=6042038;RU=tttgt;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.161982:7,7:4-7,4-7:2,15,0,0:7,2:NULL:150.298:366.612,131.36:1.38953,1.38953:8.51861e-07,0.69187,0.308144	0/0:34:1.0:7,7:7-7,7-7:19,8,0,7:7,19:2,1|3,1|4,2|5,1|6,1|7,1:201.051:326.675,113.385:0.0,0.0:0.0,4.35751e-06,0.999995
+chr1	6048614	.	AAACAAACAAAC	.	.	.	END=6048625;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:38,7,0,2:3,38:2,2:231.003:366.612,131.36:0.0,0.0:0.0,1.21015e-11,1.0	0/0:27:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:154.817:326.675,113.385:0.0,0.0:0.0,2.35957e-05,0.999979
+chr1	6051144	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=6051171;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.978832:9,9:9-9,9-9:9,9,0,2:9,9:2,1|8,1:134.067:366.612,131.36:0.0,0.0:7e-45,0.00358442,0.996428	0/0:40:1.0:7,7:7-8,7-8:26,7,0,6:7,26:4,1|6,5:217.953:326.675,113.385:0.21692,0.21692:0.0,3.26809e-08,1.0
+chr1	6056382	.	CCTCCTCCTCCTCCT	.	.	.	END=6056396;RU=cct;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998765:5,5:5-5,5-5:13,23,0,0:5,13:NULL:259.972:366.612,131.36:0.0,0.0:3.85917e-38,0.00100599,0.998998	0/0:27:0.98372:5,5:5-5,5-5:10,17,0,0:5,10:NULL:192.524:326.675,113.385:0.0,0.0:3.52835e-29,0.0132492,0.986779
+chr1	6056414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6056441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.990886:7,7:7-7,7-7:10,17,0,2:7,10:5,2:214.125:366.612,131.36:0.0,0.0:6.78826e-30,0.00684723,0.993167	0/0:38:0.997307:7,7:7-7,7-7:11,14,0,13:7,11:3,3|4,1|5,3|6,6:268.22:326.675,113.385:0.0,0.0:5.31752e-33,0.00134459,0.998662
+chr1	6059464	.	AAAAACAAAAACAAAAAC	.	.	.	END=6059481;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:33,25,0,0:3,33:NULL:365.524:366.612,131.36:0.0,0.0:0.0,3.01269e-09,1.0	0/0:44:1.0:3,3:3-3,3-3:28,16,0,0:3,28:NULL:260.005:326.675,113.385:0.0,0.0:0.0,5.9262e-08,1.0
+chr1	6059973	.	AAATAAATAAAT	.	.	.	END=6059984;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:23,21,0,2:3,23:2,2:303.124:366.612,131.36:0.0,0.0:0.0,3.97391e-07,1.0	0/0:24:0.999999:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.651:326.675,113.385:0.0,0.0:0.0,1.0502e-05,0.999993
+chr1	6061243	.	AGAGAGAGAGAG	AGAGAGAG	.	.	END=6061254;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:1.0:4,4:4-4,4-4:20,0,0,0:4,20:NULL:77.6389:366.612,131.36:0.0,0.0:1.0,3.85916e-06,0.0	0/0:44:1.0:6,6:4-6,4-6:26,14,0,3:6,26:5,3:249.986:326.675,113.385:0.339533,0.339533:0.0,6.44112e-08,1.0
+chr1	6062647	.	GTGGGTGGGTGG	.	.	.	END=6062658;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:19,28,0,2:3,19:2,2:337.593:366.612,131.36:0.0,0.0:0.0,6.14054e-06,0.999995	0/0:35:0.997682:3,3:3-3,3-3:12,23,0,0:3,12:NULL:249.551:326.675,113.385:0.0,0.0:5.23451e-40,0.00149923,0.998505
+chr1	6062751	.	TAAATAAATAAA	.	.	.	END=6062762;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999991:3,3:3-3,3-3:18,10,0,0:3,18:NULL:161.93:366.612,131.36:0.0,0.0:0.0,1.2184e-05,0.999987	0/0:16:0.997745:3,3:3-3,3-3:12,4,0,0:3,12:NULL:82.2321:326.675,113.385:0.0,0.0:9.1662e-41,0.00103777,0.998967
+chr1	6066036	.	CTCTGTCTCTGTCTCTGT	CTCTGTCTCTGT	.	.	END=6066053;RU=ctctgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.99997:2,2:2-2,2-2:17,12,0,0:2,17:NULL:176.013:366.612,131.36:0.0,0.0:0.999979,2.31339e-05,5.9961e-40	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.554:326.675,113.385:0.0,0.0:0.0,2.05396e-07,1.0
+chr1	6072915	.	AATAATAATAATAATAATAATAATAATAATAATAATAAT	AATAATAATAATAATAATAATAATAAT,AATAATAATAATAATAATAATAATAATAAT	.	.	END=6072953;RU=aat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:4:0.0671286:9,10:5-11,5-11:0,2,0,2:NULL:8,2:35.2296:366.612,131.36:1.43267,1.53245:1.0,0.0,0.0	0/0:24:0.930029:13,13:12-14,12-14:8,9,0,5:13,8:4,1|5,1|6,2|7,1:152.319:326.675,113.385:0.53502,0.53502:5.64677e-12,0.0433137,0.956757
+chr1	6077184	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6077227;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.892419:24,25:20-24,20-25:7,13,0,0:24,5|25,2:NULL:158.487:366.612,131.36:1.70567,2.21109:5.40504e-17,0.00942569,0.990596	0/0:21:0.755053:22,22:18-22,18-22:6,5,0,8:22,6:6,1|14,2|15,1|17,2|18,1|21,1:133.559:326.675,113.385:1.92222,1.92222:5.48777e-09,0.0867559,0.913343
+chr1	6080857	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=6080876;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999992:4,4:4-4,4-4:18,14,0,3:4,18:2,1|3,2:220.417:366.612,131.36:0.0,0.0:0.999987,1.36199e-05,1.52107e-38	0/0:21:0.976075:5,5:5-5,5-5:8,5,0,8:5,8:2,1|3,2|4,5:135.037:326.675,113.385:0.0,0.0:7.29175e-27,0.00865998,0.991359
+chr1	6083873	.	AATAAATAAATA	AATAAATA	.	.	END=6083884;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:32:0.774856:2,3:2-2,2-3:20,10,0,2:2,18|3,2:2,2:202.804:366.612,131.36:0.0,0.497026:0.225216,0.774819,1.263e-42	0/0:28:0.994711:3,3:3-3,3-3:10,16,0,2:3,10:2,1|3,1:207.602:326.675,113.385:0.0,0.0:3.33485e-40,0.00209673,0.997912
+chr1	6084220	.	ATTTATTTATTT	ATTT	.	.	END=6084231;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.138181:1,1:1-1,1-1:0,15,0,0:NULL:NULL:149.469:366.612,131.36:0.0,0.0:0.260032,0.543367,0.196608	0/0:19:0.998322:3,3:3-3,3-3:13,6,0,0:3,13:NULL:109.814:326.675,113.385:0.0,0.0:1.01883e-32,0.000871197,0.999134
+chr1	6085465	.	TAATAATAATAATAA	TAATAATAATAA	.	.	END=6085479;RU=taa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.98907:4,4:4-4,4-4:10,6,0,0:4,10:NULL:93.322:366.612,131.36:0.0,0.0:0.995439,0.00457339,2.73967e-23	0/0:18:0.996344:5,5:5-5,5-5:12,6,0,0:5,12:NULL:103.466:326.675,113.385:0.0,0.0:8.40892e-32,0.00230582,0.997701
+chr1	6085756	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6085801;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.750683:17,17:16-17,16-17:8,12,0,5:16,2|17,6:7,1|14,2|16,1|17,1:195.426:366.612,131.36:0.35561,0.35561:1.0,0.0,0.0	0/0:29:0.811173:23,23:23-23,23-23:6,13,0,10:23,6:5,1|8,2|10,1|11,2|14,1|19,1|22,2:226.27:326.675,113.385:0.0,0.0:6.11263e-08,0.0622423,0.937851
+chr1	6086268	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6086299;RU=tc;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0130102:23,23:1-23,1-23:0,5,0,2:NULL:15,1|21,1:63.6069:366.612,131.36:8.93866,8.93866:1.83284e-08,0.60832,0.391743	0/0:17:0.86262:16,16:16-16,16-16:6,6,0,5:16,6:4,1|5,1|14,1|15,1|16,1:123.14:326.675,113.385:0.0,0.0:4.58227e-17,0.0297807,0.970274
+chr1	6087008	.	TATTTATTTATT	.	.	.	END=6087019;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998042:3,3:3-3,3-3:12,9,0,0:3,12:NULL:131.045:366.612,131.36:0.0,0.0:2.22887e-39,0.00113631,0.998868	0/0:18:0.999661:3,3:3-3,3-3:15,3,0,0:3,15:NULL:85.7931:326.675,113.385:0.0,0.0:0.0,0.000154233,0.999849
+chr1	6092499	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6092524;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.997822:16,16:15-16,15-16:18,14,0,3:15,2|16,16:7,1|9,1|11,1:246.975:366.612,131.36:0.258566,0.258566:0.0,2.54159e-05,0.999978	0/0:34:0.999858:13,13:13-13,13-13:17,10,0,6:13,17:6,1|7,1|10,2|11,1|13,1:210.266:326.675,113.385:0.19802,0.19802:4.57521e-30,4.70373e-05,0.999955
+chr1	6093013	.	CACACACACACACA	.	.	.	END=6093026;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.396531:7,7:5-7,5-7:3,10,0,0:7,3:NULL:100.647:366.612,131.36:0.404368,0.404368:7.27447e-05,0.406649,0.593349	0/0:14:0.421024:7,7:5-7,5-7:3,9,0,2:7,3:5,2:109.583:326.675,113.385:0.575281,0.575281:6.83108e-05,0.324228,0.675718
+chr1	6098593	.	CTAGAACTAGAACTAGAA	.	.	.	END=6098610;RU=ctagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:172.134:366.612,131.36:0.0,0.0:0.0,1.78548e-05,0.999986	0/0:25:0.999799:3,3:3-3,3-3:15,8,0,2:3,15:2,2:146.151:326.675,113.385:0.0,0.0:0.0,9.13691e-05,0.99991
+chr1	6099223	.	TTGGTTGGTTGG	.	.	.	END=6099234;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.623441:3,3:3-3,3-3:4,2,0,0:3,4:NULL:32.203:366.612,131.36:0.0,0.0:1.71507e-13,0.160163,0.839912	0/0:31:0.999602:3,3:1-3,1-3:15,15,0,0:3,15:NULL:196.668:326.675,113.385:0.913899,0.913899:0.0,0.000276285,0.999727
+chr1	6099488	.	CCCACCCACCCA	.	.	.	END=6099499;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:182.584:366.612,131.36:0.0,0.0:0.0,1.09776e-06,1.0	0/0:31:0.999984:3,3:3-3,3-3:18,13,0,0:3,18:NULL:188.538:326.675,113.385:0.0,0.0:0.0,2.42689e-05,0.999978
+chr1	6099665	.	TTGTTTGTTTGTTTGTTTGTTTGT	TTGTTTGTTTGTTTGTTTGTTTGTTTGT	.	.	END=6099688;RU=ttgt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0649898:7,7:4-7,4-7:0,15,0,5:NULL:4,3|5,1|6,1:172.593:366.612,131.36:0.866209,0.866209:8.74432e-09,0.541024,0.459089	0/0:44:1.0:6,6:6-6,6-6:23,16,0,5:6,23:2,1|3,2|4,1|5,1:276.875:326.675,113.385:0.0,0.0:0.0,1.05494e-06,1.0
+chr1	6102505	.	CAACAACAACAA	.	.	.	END=6102516;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999901:4,4:4-4,4-4:17,12,0,0:4,17:NULL:173.782:366.612,131.36:0.0,0.0:0.0,7.15075e-05,0.999932	0/0:36:0.999977:4,4:4-4,4-4:18,18,0,0:4,18:NULL:228.586:326.675,113.385:0.0,0.0:0.0,3.11281e-05,0.999971
+chr1	6107421	.	AAATAAATAAAT	.	.	.	END=6107432;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:130.232:366.612,131.36:0.0,0.0:0.0,5.2435e-06,0.999995	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.826:326.675,113.385:0.0,0.0:0.0,4.03319e-06,0.999995
+chr1	6108219	.	CACACACACACACACACACACACACACACACACACACA	CA	.	.	END=6108256;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:61:0.993249:19,19:19-20,19-20:25,18,0,18:17,2|19,20|20,3:4,2|5,3|7,1|8,1|9,1|10,1|11,3|13,1|14,2|15,2|18,1:429.764:326.675,113.385:0.29703,0.29703:1.847e-21,6.9518e-05,0.999933
+chr1	6108461	.	AGAGAGAGAGAGAGAG	AG	.	.	END=6108476;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.99941:8,8:8-8,8-8:15,10,0,0:8,15:NULL:150.292:326.675,113.385:0.139319,0.139319:3.98759e-33,0.000372694,0.999629
+chr1	6109390	.	CACCCACCCACC	CACCCACCCACCCACC	.	.	END=6109401;RU=cacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:21:0.0564412:3,4:2-6,2-6:0,21,0,0:NULL:NULL:186.57:366.612,131.36:0.979147,0.985832:0.0502075,0.369433,0.580497	0/0:38:1.0:3,3:2-3,2-3:24,13,0,0:3,24:NULL:212.488:326.675,113.385:0.298675,0.298675:0.0,4.71475e-07,1.0
+chr1	6109799	.	AAATAAATAAAT	AAATAAAT	.	.	END=6109810;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0229253:2,2:1-4,1-4:0,8,0,0:NULL:NULL:79.1816:366.612,131.36:0.723518,0.723518:0.0860922,0.471438,0.442637	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.156:326.675,113.385:0.0,0.0:0.0,1.66408e-07,1.0
+chr1	6109840	.	CAACAACAACAA	CAACAA	.	.	END=6109851;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0171646:2,2:1-3,1-3:0,10,0,0:NULL:NULL:95.4701:366.612,131.36:0.673267,0.673267:0.125553,0.493881,0.380755	0/0:28:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:156.084:326.675,113.385:0.0,0.0:0.0,7.19318e-06,0.999994
+chr1	6110101	.	AAATAAATAAAT	AAAT	.	.	END=6110112;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.114961:1,1:1-3,1-3:0,29,0,0:NULL:NULL:273.872:366.612,131.36:0.984041,0.984041:0.305634,0.506291,0.188084	0/0:19:0.999394:3,3:3-3,3-3:14,5,0,0:3,14:NULL:97.881:326.675,113.385:0.0,0.0:8.52e-43,0.000282072,0.99972
+chr1	6114158	.	AATAAATAAATA	.	.	.	END=6114169;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.808815:3,3:3-3,3-3:5,8,0,0:3,5:NULL:94.8619:366.612,131.36:0.0,0.0:1.67371e-12,0.0870317,0.913069	0/0:12:0.767742:3,3:3-3,3-3:5,7,0,0:3,5:NULL:81.3956:326.675,113.385:0.0,0.0:3.77461e-12,0.127857,0.872242
+chr1	6118166	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6118197;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999744:24,24:22-24,22-24:16,10,0,15:24,16:6,2|7,2|8,1|9,1|12,1|14,1|17,2|19,1|20,1|21,1|23,1|24,1:287.608:366.612,131.36:0.507951,0.507951:0.0,0.0,1.0	0/0:32:0.98645:16,16:16-17,16-17:10,9,0,12:16,10:5,1|6,2|9,1|10,3|12,1|13,1|14,3:227.308:326.675,113.385:0.345543,0.345543:5.24999e-15,0.00639446,0.993618
+chr1	6118512	.	TTCAATTCAATTCAATTCAA	TTCAATTCAATTCAATTCAATTCAA	.	.	END=6118531;RU=ttcaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999993:5,5:5-5,5-5:19,13,0,5:5,19:3,1|4,4:231.825:366.612,131.36:0.0,0.0:0.0,1.00077e-06,1.0	0/0:31:0.99998:4,4:4-4,4-4:18,9,0,4:4,18:3,4:184.02:326.675,113.385:0.0,0.0:0.0,1.38592e-05,0.999987
+chr1	6122082	.	AAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=6122096;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.994947:5,5:5-5,5-5:11,13,0,0:5,11:NULL:162.863:366.612,131.36:0.0,0.0:0.0,0.00154822,0.998458	0/0:33:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:207.671:326.675,113.385:0.0,0.0:0.0,1.27218e-05,0.999987
+chr1	6124347	.	TAAATAAATAAATAAATAAA	TAAA,TAAATAAA	.	.	END=6124366;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0780755:1,2:1-5,1-5:0,20,0,0:NULL:NULL:195.895:366.612,131.36:1.2691,1.27057:0.497749,0.429319,0.072985	0/0:27:1.00001:5,5:5-5,5-5:22,5,0,0:5,22:NULL:138.504:326.675,113.385:0.0,0.0:0.0,1.54925e-06,1.0
+chr1	6126323	.	AATCAATCAATCAATCAATCAATCAATCAATC	AATCAATCAATCAATCAATCAATC	.	.	END=6126354;RU=aatc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.997795:6,6:6-6,6-6:13,14,0,3:6,13:3,3:197.893:366.612,131.36:0.0,0.0:0.999574,0.00043049,1.30887e-36	0/0:25:0.999059:8,8:8-8,8-8:13,5,0,7:8,13:2,1|4,1|5,1|6,2|7,2:152.492:326.675,113.385:0.0,0.0:1.43201e-31,0.000422655,0.999582
+chr1	6130083	.	AAATCAAATCAAATC	.	.	.	END=6130097;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.998496:3,3:3-3,3-3:13,18,0,0:3,13:NULL:224.981:366.612,131.36:0.0,0.0:7.4e-44,0.00115319,0.998853	0/0:23:0.999472:3,3:3-3,3-3:14,9,0,0:3,14:NULL:144.783:326.675,113.385:0.0,0.0:0.0,0.000341248,0.99966
+chr1	6131636	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=6131675;RU=atag;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:10:0.704011:10,10:10-10,10-10:5,5,0,0:10,5:NULL:66.1764:366.612,131.36:0.29703,0.29703:3.54997e-12,0.179667,0.820398	0/0:25:0.984166:10,10:10-10,10-10:9,8,0,8:10,9:2,1|4,1|5,1|7,1|8,1|9,3:173.745:326.675,113.385:0.0,0.0:5.2531e-22,0.00554703,0.994467
+chr1	6132801	.	TTGGTTGGTTGGTTGG	.	.	.	END=6132816;RU=ttgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.948458:4,4:4-4,4-4:8,16,0,0:4,8:NULL:178.262:366.612,131.36:0.0,0.0:5.35741e-27,0.0393248,0.960742	0/0:37:0.999998:4,4:4-4,4-4:18,14,0,5:4,18:2,1|3,4:230.985:326.675,113.385:0.0,0.0:0.0,1.08062e-05,0.999993
+chr1	6133624	.	AAATAAATAAAT	.	.	.	END=6133635;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.962477:3,3:3-3,3-3:8,10,0,0:3,8:NULL:121.6:366.612,131.36:0.0,0.0:2.95185e-25,0.0196238,0.980413	0/0:16:0.994882:3,3:3-3,3-3:11,5,0,0:3,11:NULL:92.3692:326.675,113.385:0.0,0.0:1.38372e-34,0.002219,0.99779
+chr1	6134579	.	AAATAAAATAAAATA	.	.	.	END=6134593;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.993759:3,3:3-3,3-3:11,14,0,0:3,11:NULL:174.422:366.612,131.36:0.0,0.0:1.87619e-36,0.00370717,0.996301	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:177.07:326.675,113.385:0.0,0.0:0.0,4.22136e-06,0.999995
+chr1	6134731	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6134782;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0170447:23,23:1-24,1-24:0,13,0,6:NULL:7,2|12,2|19,1|23,1:173.358:366.612,131.36:7.47154,7.47154:0.845741,0.152508,0.0018332	0/0:33:0.429794:26,26:25-26,25-26:6,18,0,9:25,2|26,4:5,1|6,1|7,1|11,1|12,1|15,1|21,1|26,2:270.245:326.675,113.385:0.472558,0.472558:8.09277e-19,0.522431,0.47766
+chr1	6136631	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6136660;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.482195:20,20:16-20,16-20:4,14,0,0:20,4:NULL:151.317:366.612,131.36:0.913899,0.913899:0.0,0.0,1.0	0/0:48:0.636075:15,15:14-16,14-16:25,16,0,7:13,2|14,6|15,14|16,3:5,1|6,1|8,1|11,1|14,3:338.333:326.675,113.385:0.673122,0.673122:3.52494e-13,0.351759,0.648281
+chr1	6137129	.	TATTATTATTAT	.	.	.	END=6137140;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:26,12,0,0:4,26:NULL:216.068:366.612,131.36:0.0,0.0:0.0,1.37565e-07,1.0	0/0:22:0.999578:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.607:326.675,113.385:0.0,0.0:1.757e-41,0.000238084,0.999765
+chr1	6137380	.	TTGTTTGTTTGT	TTGT	.	.	END=6137391;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.138668:1,1:1-2,1-2:0,23,0,0:NULL:NULL:210.404:366.612,131.36:0.323567,0.323567:0.373728,0.491082,0.135269	0/0:37:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:183.108:326.675,113.385:0.0,0.0:0.0,8.06194e-09,1.0
+chr1	6137986	.	TGCATGCATGCA	.	.	.	END=6137997;RU=tgca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:281.014:366.612,131.36:0.0,0.0:0.0,3.39933e-07,1.0	0/0:18:0.994469:3,3:3-3,3-3:11,7,0,0:3,11:NULL:116.139:326.675,113.385:0.0,0.0:7.27824e-38,0.00322665,0.996784
+chr1	6142183	.	AAACAAACAAACAAAC	AAACAAACAAAC	.	.	END=6142198;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.968282:3,3:3-3,3-3:8,12,0,0:3,8:NULL:141.244:366.612,131.36:0.0,0.0:0.98703,0.0129976,3.1702e-24	0/0:42:1.00001:4,4:4-4,4-4:23,17,0,2:4,23:3,2:263.53:326.675,113.385:0.0,0.0:0.0,9.19229e-07,1.0
+chr1	6144901	.	GAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=6144922;RU=ga;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.983341:8,8:7-8,7-8:10,0,0,0:8,10:NULL:40.7144:366.612,131.36:0.236383,0.236383:0.997944,0.00205975,2.92473e-22	0/0:43:0.999973:11,11:11-11,11-11:25,13,0,4:10,2|11,23:6,1|7,1|10,2:261.614:326.675,113.385:0.0,0.0:1.5765e-36,3.36838e-05,0.99997
+chr1	6153283	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=6153306;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.965536:6,6:6-6,6-6:9,15,0,0:6,9:NULL:174.808:366.612,131.36:0.0,0.0:2.75578e-29,0.0260199,0.974032	0/0:25:0.999981:6,6:6-6,6-6:18,5,0,2:6,18:4,1|5,1:133.222:326.675,113.385:0.0,0.0:0.0,1.21902e-05,0.999987
+chr1	6153696	.	AACTAACTAACT	.	.	.	END=6153707;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999994:3,3:3-3,3-3:19,11,0,0:3,19:NULL:177.198:366.612,131.36:0.0,0.0:0.0,1.20556e-05,0.999987	0/0:14:0.989695:3,3:3-3,3-3:10,4,0,0:3,10:NULL:76.5681:326.675,113.385:0.0,0.0:1.32747e-32,0.00489523,0.995116
+chr1	6156105	.	GGTGGTGGTGGT	.	.	.	END=6156116;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999945:4,4:4-4,4-4:18,13,0,0:4,18:NULL:194.984:366.612,131.36:0.0,0.0:0.0,3.71032e-05,0.999964	0/0:43:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:245.438:326.675,113.385:0.0,0.0:0.0,4.38061e-08,1.0
+chr1	6156235	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=6156254;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999629:6,6:6-6,6-6:14,23,0,4:6,14:2,1|3,1|4,1|5,1:299.189:366.612,131.36:0.0,0.0:0.0,0.00013068,0.999872	0/0:27:0.947843:5,5:5-5,5-5:9,18,0,0:5,9:NULL:205.243:326.675,113.385:0.0,0.0:1.78488e-25,0.0429236,0.957147
+chr1	6157851	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6157890;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.620061:24,25:24-24,24-25:7,8,0,6:24,7:4,1|6,1|9,1|13,1|21,1|25,1:166.354:366.612,131.36:0.0,0.525965:0.0,0.0,1.0	0/0:27:0.752279:20,20:17-20,17-20:12,9,0,5:17,2|20,10:4,1|10,1|11,1|17,1|20,1:183.179:326.675,113.385:1.30783,1.30783:1.61306e-21,0.24328,0.756734
+chr1	6158692	.	AGCAGCAGCAGC	.	.	.	END=6158703;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:30,19,0,0:4,30:NULL:296.539:366.612,131.36:0.0,0.0:0.0,1.30628e-08,1.0	0/0:45:1.0:4,4:4-4,4-4:26,19,0,0:4,26:NULL:279.647:326.675,113.385:0.0,0.0:0.0,1.50567e-07,1.0
+chr1	6158961	.	GTGGTGGTGGTG	.	.	.	END=6158972;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:31,17,0,0:4,31:NULL:274.702:366.612,131.36:0.0,0.0:0.0,4.15691e-09,1.0	0/0:53:1.0:4,4:4-4,4-4:30,21,0,2:4,30:3,2:321.545:326.675,113.385:0.0,0.0:0.0,4.70615e-09,1.0
+chr1	6160096	.	TACATACATACA	.	.	.	END=6160107;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:22,17,0,2:3,22:2,2:257.513:366.612,131.36:0.0,0.0:0.0,1.07318e-06,1.0	0/0:40:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:231.279:326.675,113.385:0.0,0.0:0.0,9.43314e-08,1.0
+chr1	6160598	.	AATAAATAAATA	.	.	.	END=6160609;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999995:3,3:2-3,2-3:19,21,0,0:3,19:NULL:274.628:366.612,131.36:0.323567,0.323567:0.0,1.31913e-05,0.999987	0/0:39:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:225.602:326.675,113.385:0.0,0.0:0.0,3.47456e-07,1.0
+chr1	6162049	.	CCACCACCACCA	.	.	.	END=6162060;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:10:0.988354:4,4:4-4,4-4:10,0,0,0:4,10:NULL:39.0933:366.612,131.36:0.0,0.0:3.00169e-25,0.00586113,0.994152	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:177.09:326.675,113.385:0.0,0.0:0.0,7.64484e-06,0.999994
+chr1	6163104	.	TTTGTTTGTTTG	.	.	.	END=6163115;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:220.902:366.612,131.36:0.0,0.0:0.0,8.27155e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:262.632:326.675,113.385:0.0,0.0:0.0,2.08384e-07,1.0
+chr1	6178405	.	ATAAAATAAAATAAA	.	.	.	END=6178419;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-4,3-4:21,15,0,0:3,21:NULL:219.077:366.612,131.36:0.236383,0.236383:0.0,3.03743e-06,1.0	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:229.543:326.675,113.385:0.0,0.0:0.0,4.18841e-07,1.0
+chr1	6178663	.	GACCTGACCTGACCT	.	.	.	END=6178677;RU=gacct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:28,32,0,0:3,28:NULL:404.545:366.612,131.36:0.0,0.0:0.0,2.97062e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:25,6,0,3:3,25:2,3:175.922:326.675,113.385:0.0,0.0:0.0,1.12569e-07,1.0
+chr1	6180765	.	TAAATAAATAAA	.	.	.	END=6180776;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999829:3,3:3-3,3-3:15,17,0,0:3,15:NULL:211.521:366.612,131.36:0.0,0.0:0.0,0.000125374,0.999879	0/0:14:0.936818:3,3:3-3,3-3:7,5,0,2:3,7:2,2:84.2429:326.675,113.385:0.0,0.0:5.72889e-23,0.0212536,0.978789
+chr1	6188010	.	TTTAATTTAATTTAA	.	.	.	END=6188024;RU=tttaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.838321:3,3:3-3,3-3:6,15,0,0:3,6:NULL:164.825:366.612,131.36:0.0,0.0:1.6313e-19,0.108224,0.891874	0/0:22:0.999711:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.999:326.675,113.385:0.0,0.0:0.0,0.000179156,0.999825
+chr1	6190661	.	AAATAAATAAAT	.	.	.	END=6190672;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:238.529:366.612,131.36:0.0,0.0:0.0,3.31534e-06,1.0	0/0:34:0.999996:3,3:3-3,3-3:19,15,0,0:3,19:NULL:211.052:326.675,113.385:0.0,0.0:0.0,1.27372e-05,0.999987
+chr1	6191823	.	AACAAACAAACA	.	.	.	END=6191834;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.00001:3,3:3-3,3-3:22,24,0,4:3,22:2,4:329.783:366.612,131.36:0.0,0.0:0.0,5.95576e-07,1.0	0/0:31:0.999944:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.552:326.675,113.385:0.0,0.0:0.0,3.98189e-05,0.999963
+chr1	6193268	.	CAACAACAACAACAA	.	.	.	END=6193282;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:5,5:5-5,5-5:26,23,0,0:5,26:NULL:318.943:366.612,131.36:0.0990099,0.0990099:0.0,2.14392e-07,1.0	0/0:34:0.999998:5,5:5-5,5-5:18,13,0,3:5,18:4,3:208.346:326.675,113.385:0.0,0.0:0.0,1.1307e-05,0.999993
+chr1	6194222	.	AACAAAAACAAAAACAAAAACAAA	AACAAAAACAAAAACAAA	.	.	END=6194245;RU=aacaaa;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:217.53:366.612,131.36:0.0,0.0:1.0,2.13012e-06,0.0	0/0:40:1.0:4,4:3-4,3-4:24,8,0,7:4,24:2,1|3,6:217.741:326.675,113.385:0.253975,0.253975:0.0,1.443e-07,1.0
+chr1	6196714	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6196751;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.596831:21,22:20-21,20-22:14,10,0,18:20,4|21,7|22,3:5,1|6,2|8,2|9,1|10,1|11,4|12,1|15,4|16,1|19,1:308.486:366.612,131.36:0.374147,0.769225:3.65542e-38,7.91182e-05,0.999925	0/0:19:0.816281:19,19:18-19,18-19:9,5,0,5:18,2|19,7:6,2|15,2|17,1:128.555:326.675,113.385:0.311527,0.311527:3.19036e-07,0.158704,0.84137
+chr1	6197125	.	GTTTGTTTGTTTGTTT	GTTTGTTTGTTT	.	.	END=6197140;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:3,3:3-3,3-3:29,25,0,0:3,29:NULL:343.468:366.612,131.36:0.0,0.0:1.0,5.40311e-09,0.0	0/0:40:1.0:4,4:4-4,4-4:20,14,0,6:4,20:2,1|3,5:244.8:326.675,113.385:0.0,0.0:2.10572e-29,4.70157e-06,0.999995
+chr1	6197608	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6197647;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0197949:34,34:15-37,15-37:0,12,0,11:NULL:9,1|12,1|13,2|15,2|19,1|28,1|29,1|30,1|34,1:197.621:366.612,131.36:6.74231,6.74231:3.45815e-30,0.143738,0.856344	0/0:48:0.965823:20,20:19-20,19-20:13,18,0,17:19,2|20,11:5,3|9,2|10,2|11,2|12,1|15,1|16,1|18,3|19,2:365.533:326.675,113.385:0.236383,0.236383:1.13737e-10,0.0318096,0.968249
+chr1	6197805	.	CTGCCTCTGCCTCTGCCT	CTGCCTCTGCCT	.	.	END=6197822;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.0:2,2:2-2,2-2:44,2,0,0:2,44:NULL:191.074:366.612,131.36:0.0,0.0:1.0,2.87214e-13,0.0	0/0:57:1.0:3,3:3-3,3-3:39,18,0,0:3,39:NULL:320.576:326.675,113.385:0.0,0.0:0.0,1.62659e-11,1.0
+chr1	6198434	.	CACACACACACACA	.	.	.	END=6198447;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.997258:7,7:6-7,6-7:13,15,0,0:7,13:NULL:190.885:366.612,131.36:0.236383,0.236383:5.4547e-24,0.0019861,0.998019	0/0:30:1.0:7,7:7-7,7-7:25,5,0,0:7,25:NULL:144.648:326.675,113.385:0.0,0.0:3e-45,2.28277e-07,1.0
+chr1	6199733	.	TTATTTATTTAT	.	.	.	END=6199744;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.99552:3,3:3-3,3-3:12,24,0,0:3,12:NULL:279.333:366.612,131.36:0.0,0.0:1.2305e-39,0.00393815,0.996073	0/0:42:1.0:3,3:3-3,3-3:22,17,0,3:3,22:2,3:268.516:326.675,113.385:0.0,0.0:0.0,8.0634e-07,1.0
+chr1	6203219	.	AAACAAACAAAC	.	.	.	END=6203230;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999833:3,3:3-3,3-3:16,24,0,0:3,16:NULL:278.446:366.612,131.36:0.0,0.0:0.0,0.000147499,0.999856	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:183.432:326.675,113.385:0.0,0.0:0.0,2.854e-06,1.0
+chr1	6207701	.	GTTTGTTTGTTT	.	.	.	END=6207712;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999763:3,3:3-3,3-3:15,11,0,0:3,15:NULL:161.819:366.612,131.36:0.0,0.0:3e-45,0.000127729,0.999873	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.425:326.675,113.385:0.0,0.0:0.0,8.11456e-07,1.0
+chr1	6208513	.	GTTGTTGTTGTT	.	.	.	END=6208524;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:25,12,0,0:4,25:NULL:201.525:366.612,131.36:0.0,0.0:0.0,2.75179e-07,1.0	0/0:28:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:151.135:326.675,113.385:0.0,0.0:0.0,9.37241e-06,0.999993
+chr1	6208671	.	TTATTTTTATTTTTATTT	TTATTT	.	.	END=6208688;RU=ttattt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0737831:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.31:366.612,131.36:0.515232,0.515232:0.232985,0.519698,0.247355	0/0:26:0.99963:3,3:3-3,3-3:14,10,0,2:3,14:2,1|3,1:162.315:326.675,113.385:0.0,0.0:0.0,0.000182714,0.999819
+chr1	6210401	.	TTTGTTTGTTTG	.	.	.	END=6210412;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:188.78:366.612,131.36:0.0,0.0:0.0,1.50332e-06,1.0	0/0:20:0.998483:3,3:3-3,3-3:12,5,0,3:3,12:2,3:116.13:326.675,113.385:0.0,0.0:8.19467e-38,0.000558929,0.999445
+chr1	6219473	.	GTTTGTTTGTTTGTTT	.	.	.	END=6219488;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999952:4,4:4-4,4-4:17,15,0,3:4,17:2,1|3,2:231.814:366.612,131.36:0.0,0.0:0.0,2.74888e-05,0.999972	0/0:38:1.0:4,4:4-4,4-4:21,17,0,0:4,21:NULL:254.168:326.675,113.385:0.0,0.0:0.0,7.24935e-06,0.999994
+chr1	6219491	.	ATTTATTTATTT	.	.	.	END=6219502;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:20,21,0,2:3,20:2,2:293.52:366.612,131.36:0.0,0.0:0.0,2.06476e-06,1.0	0/0:45:1.0:3,3:3-3,3-3:25,17,0,3:3,25:2,3:289.229:326.675,113.385:0.0,0.0:0.0,1.11238e-07,1.0
+chr1	6224070	.	GTGTGTGTGTGT	.	.	.	END=6224081;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:6,6:6-6,6-6:21,13,0,2:6,21:4,1|5,1:220.392:366.612,131.36:0.0,0.0:0.0,3.66464e-06,1.0	0/0:33:1.00001:6,6:6-6,6-6:21,10,0,2:6,21:5,2:185.081:326.675,113.385:0.0,0.0:0.0,1.72515e-06,1.0
+chr1	6226500	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6226537;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0298444:35,35:33-36,33-36:0,9,0,2:NULL:29,1|31,1:100.568:366.612,131.36:0.877118,0.877118:0.0,0.0,1.0	0/0:43:0.997486:19,19:18-19,18-19:24,9,0,7:18,5|19,19:6,1|9,1|12,1|13,1|14,1|15,1|18,1:259.282:326.675,113.385:0.5093,0.5093:7.5948e-22,0.00251275,0.997495
+chr1	6226712	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=6226727;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999816:8,8:8-8,8-8:16,11,0,5:8,16:2,1|4,4:204.676:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:45:1.0:4,4:4-4,4-4:24,16,0,5:4,24:2,1|3,4:275.322:326.675,113.385:0.0,0.0:0.0,1.73189e-07,1.0
+chr1	6227414	.	TTGTTTGTTTGT	.	.	.	END=6227425;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,22,0,0:3,23:NULL:289.964:366.612,131.36:0.0,0.0:0.0,3.1637e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:212.816:326.675,113.385:0.0,0.0:0.0,4.12816e-06,0.999995
+chr1	6228918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6228955;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.953211:14,14:12-14,12-14:25,14,0,2:12,2|13,4|14,17|15,2:11,1|14,1:272.748:366.612,131.36:0.495643,0.495643:1.0,0.0,0.0	0/0:21:0.323881:19,19:19-22,19-22:3,6,0,11:19,3:4,1|6,3|11,2|15,2|16,1|18,2:155.522:326.675,113.385:1.40014,1.40014:0.000263973,0.159522,0.840288
+chr1	6229792	.	CAAAACAAAACAAAACAAAACAAAA	CAAAACAAAACAAAACAAAA	.	.	END=6229816;RU=caaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999971:4,4:4-4,4-4:18,16,0,0:4,18:NULL:223.227:366.612,131.36:0.0,0.0:0.999993,1.01201e-05,0.0	0/0:16:0.959818:5,5:5-5,5-5:8,6,0,2:5,8:2,1|3,1:100.318:326.675,113.385:0.0,0.0:1.16675e-24,0.0229229,0.977121
+chr1	6231061	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6231082;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.0552115:13,13:6-15,6-15:0,24,0,9:NULL:5,2|7,1|8,2|10,1|11,2|13,1:297.205:366.612,131.36:2.34668,2.34668:8.57626e-23,0.273988,0.726012	0/0:40:0.999295:11,11:9-12,9-12:22,10,0,6:11,20|12,2:5,1|6,2|9,1|10,2:232.667:326.675,113.385:0.410145,0.410145:5.22495e-29,2.21999e-06,1.0
+chr1	6232825	.	TTTGTTTGTTTG	TTTGTTTG	.	.	END=6232836;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.00001:2,2:2-2,2-2:18,16,0,2:2,18:2,2:229.027:366.612,131.36:0.0,0.0:0.999993,9.95117e-06,0.0	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.983:326.675,113.385:0.0,0.0:0.0,7.29909e-07,1.0
+chr1	6232863	.	TTTGTTTGTTTG	.	.	.	END=6232874;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:23,24,0,0:3,23:NULL:305.213:366.612,131.36:0.0,0.0:0.0,8.45102e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,8,0,3:3,22:2,3:182.425:326.675,113.385:0.0,0.0:0.0,7.23581e-07,1.0
+chr1	6232977	.	CTGCCTCTGCCTCTGCCT	CTGCCTCTGCCTCTGCCTCTGCCT	.	.	END=6232994;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:4,4:4-4,4-4:25,16,0,0:4,25:NULL:248.419:366.612,131.36:0.0,0.0:0.0,2.33065e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:200.399:326.675,113.385:0.0,0.0:0.0,7.36549e-07,1.0
+chr1	6233703	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6233722;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.995376:4,4:4-4,4-4:12,25,0,2:4,12:2,2:292.579:366.612,131.36:0.0,0.0:1.19963e-32,0.003873,0.996135	0/0:25:0.995233:4,4:4-4,4-4:11,11,0,3:4,11:2,1|3,2:169.752:326.675,113.385:0.0,0.0:3.18555e-30,0.00296114,0.997048
+chr1	6236385	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6236434;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.98567:12,12:12-12,12-12:13,19,0,3:11,2|12,11:9,1|11,2:261.163:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/0:31:0.477729:25,25:24-25,24-25:7,14,0,10:24,2|25,5:7,1|9,1|10,1|11,2|16,1|19,2|23,1|24,1:242.309:326.675,113.385:0.452422,0.452422:2.07637e-05,0.478374,0.521694
+chr1	6238596	.	ATTATTATTATT	ATTATTATTATTATT	.	.	END=6238607;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999236:5,5:4-5,4-5:15,16,0,0:5,15:NULL:213.502:366.612,131.36:0.270063,0.270063:0.0,0.000479854,0.999523	0/0:29:0.999393:4,4:4-4,4-4:15,14,0,0:4,15:NULL:194.976:326.675,113.385:0.0,0.0:2.88657e-37,0.000419021,0.999583
+chr1	6239066	.	TTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=6239077;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.271396:4,4:1-4,1-4:2,10,0,0:4,2:NULL:98.8609:366.612,131.36:0.634282,0.634282:1.00093e-11,0.342876,0.657149	0/0:29:0.999785:3,3:3-3,3-3:15,11,0,3:3,15:2,3:182.834:326.675,113.385:0.0,0.0:1.56924e-40,0.00010514,0.999896
+chr1	6240390	.	GTGCGTGCGTGC	GTGC	.	.	END=6240401;RU=gtgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0746064:1,1:1-4,1-4:0,22,0,0:NULL:NULL:201.478:366.612,131.36:0.92647,0.92647:0.230102,0.516179,0.253757	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:173.043:326.675,113.385:0.0,0.0:0.0,6.06587e-06,0.999994
+chr1	6247906	.	TGTTGTTGTTGTTGT	.	.	.	END=6247920;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.00001:5,5:5-5,5-5:22,25,0,0:5,22:NULL:313.808:366.612,131.36:0.0,0.0:0.0,3.09887e-06,1.0	0/0:38:1.0:5,5:4-5,4-5:24,11,0,2:5,24:3,1|4,1:216.699:326.675,113.385:0.236383,0.236383:0.0,4.22916e-07,1.0
+chr1	6250708	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=6250725;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:6,6:6-6,6-6:22,15,0,4:6,22:4,1|5,3:261.781:366.612,131.36:0.0,0.0:0.0,6.02088e-07,1.0	0/0:26:0.999563:6,6:6-6,6-6:15,9,0,2:6,15:3,1|5,1:161.233:326.675,113.385:0.0,0.0:1.7459e-41,0.000263725,0.999736
+chr1	6250858	.	TATGTATGTATGTATG	.	.	.	END=6250873;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:24,21,0,2:4,24:3,2:303.256:366.612,131.36:0.0,0.0:0.0,3.88591e-07,1.0	0/0:32:0.994009:4,4:3-4,3-4:21,9,0,2:3,2|4,19:3,2:192.209:326.675,113.385:0.419363,0.419363:0.0,0.00601312,0.994001
+chr1	6251852	.	AAATAAATAAAT	.	.	.	END=6251863;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:21,19,0,0:3,21:NULL:250.565:366.612,131.36:0.0,0.0:0.0,4.20457e-06,0.999995	0/0:22:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.405:326.675,113.385:0.0,0.0:0.0,6.98634e-05,0.999933
+chr1	6252245	.	ATATATATATATATAT	ATATATATAT	.	.	END=6252260;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.428225:8,8:6-8,6-8:4,13,0,0:8,4:NULL:133.525:366.612,131.36:0.788482,0.788482:2.39144e-06,0.441308,0.558798	1/1:8:0.0176847:5,5:5-9,5-9:0,5,0,0:NULL:NULL:43.6947:326.675,113.385:1.38875,1.38875:0.375284,0.481424,0.14336
+chr1	6252276	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATAT,ATATATATATATATATATATATATATATATATAT	.	.	END=6252315;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.834081:5,5:3-5,3-5:6,8,0,0:5,6:NULL:95.4925:366.612,131.36:0.945117,0.945117:1.0,0.0,0.0	2/2:7:0.0197936:17,17:1-17,1-17:0,4,0,3:NULL:5,1|8,1|17,1:59.9756:326.675,113.385:5.72911,5.72911:0.76738,0.225041,0.00762246
+chr1	6260354	.	TAAATAAATAAA	.	.	.	END=6260365;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:217.602:366.612,131.36:0.0,0.0:0.0,2.08516e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.565:326.675,113.385:0.0,0.0:0.0,1.0302e-05,0.999993
+chr1	6266174	.	TTGTTTTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTT	.	.	END=6266198;RU=ttgtt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.997192:4,4:4-4,4-4:11,16,0,3:4,11:3,3:209.654:366.612,131.36:0.0,0.0:0.99877,0.00123274,1.72179e-30	0/0:29:0.999863:5,5:5-5,5-5:16,9,0,4:5,16:3,4:176.745:326.675,113.385:0.0,0.0:5.2806e-34,0.00010021,0.999902
+chr1	6267793	.	TGTTTGTTTGTT	.	.	.	END=6267804;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.997751:3,3:3-3,3-3:12,9,0,0:3,12:NULL:130.684:366.612,131.36:0.0,0.0:1.30609e-37,0.00086217,0.999142	0/0:39:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.408:326.675,113.385:0.0,0.0:0.0,2.42279e-06,1.0
+chr1	6269522	.	GTTGTTGTTGTT	.	.	.	END=6269533;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999964:4,4:4-4,4-4:18,7,0,0:4,18:NULL:136.356:366.612,131.36:0.0,0.0:0.0,2.879e-05,0.999972	0/0:39:1.00001:4,4:4-4,4-4:22,15,0,2:4,22:3,2:240.943:326.675,113.385:0.0,0.0:0.0,1.42327e-06,1.0
+chr1	6269576	.	GATAGGATAGGATAG	.	.	.	END=6269590;RU=gatag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:156.249:366.612,131.36:0.0,0.0:0.0,8.75009e-06,0.999994	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:218.717:326.675,113.385:0.0,0.0:0.0,7.19534e-08,1.0
+chr1	6271401	.	TCATCATCATCA	.	.	.	END=6271412;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999995:4,4:4-4,4-4:20,13,0,0:4,20:NULL:199.249:366.612,131.36:0.0,0.0:0.0,1.43347e-05,0.999987	0/0:25:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:121.848:326.675,113.385:0.0,0.0:0.0,7.85478e-06,0.999994
+chr1	6273501	.	TTCATTCATTCA	.	.	.	END=6273512;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.998792:3,3:3-3,3-3:13,0,0,0:3,13:NULL:50.7793:366.612,131.36:0.0,0.0:9.4724e-41,0.000490454,0.999514	0/0:19:0.999431:3,3:3-3,3-3:14,5,0,0:3,14:NULL:101.03:326.675,113.385:0.0,0.0:7.8e-44,0.000273069,0.999728
+chr1	6273618	.	ACCCACCCACCC	.	.	.	END=6273629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.76159:3,3:3-3,3-3:5,2,0,0:3,5:NULL:36.5433:366.612,131.36:0.0,0.0:5.11652e-14,0.0983203,0.901783	0/0:21:0.989861:3,3:3-3,3-3:10,11,0,0:3,10:NULL:134.88:326.675,113.385:0.0,0.0:7.59975e-27,0.00483192,0.995182
+chr1	6274375	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=6274394;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:3,2|4,2:171.617:366.612,131.36:0.0,0.0:0.0,1.3935e-06,1.0	0/0:37:1.0:5,5:5-5,5-5:26,7,0,4:5,26:3,1|4,3:196.057:326.675,113.385:0.0,0.0:0.0,4.63645e-08,1.0
+chr1	6276992	.	ATGATGATGATG	.	.	.	END=6277003;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:4,4:4-4,4-4:18,21,0,0:4,18:NULL:258.046:366.612,131.36:0.0,0.0:0.0,4.97124e-05,0.999949	0/0:33:1.00001:4,4:4-4,4-4:22,11,0,0:4,22:NULL:185.686:326.675,113.385:0.0,0.0:0.0,2.22016e-06,1.0
+chr1	6277038	.	AGCAGCAGCAGC	.	.	.	END=6277049;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999636:4,4:4-4,4-4:15,29,0,0:4,15:NULL:321.087:366.612,131.36:0.0,0.0:0.0,0.00034579,0.999658	0/0:33:1.00001:4,4:4-4,4-4:23,10,0,0:4,23:NULL:184.665:326.675,113.385:0.0,0.0:0.0,1.51151e-06,1.0
+chr1	6285646	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6285691;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.931843:25,26:24-25,25-26:10,12,0,14:24,2|25,5|26,3:12,1|13,1|15,3|16,2|19,2|20,1|22,2|25,2:276.338:366.612,131.36:0.240494,0.459304:3.22746e-34,0.000101141,0.999902	0/0:48:0.742702:23,23:22-24,22-24:14,13,0,20:22,3|23,9|24,2:5,2|6,1|7,1|8,1|9,1|12,1|14,1|15,3|16,1|17,3|18,1|21,1|22,1|23,2:352.699:326.675,113.385:0.561134,0.561134:1.89285e-24,0.0129286,0.987098
+chr1	6290853	.	TCCTTCCTTCCT	.	.	.	END=6290864;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999831:3,3:3-3,3-3:17,16,0,0:3,17:NULL:214.565:366.612,131.36:0.0,0.0:0.0,0.000103485,0.999896	0/0:52:1.0:3,3:3-3,3-3:32,20,0,0:3,32:NULL:317.715:326.675,113.385:0.0,0.0:0.0,4.87576e-09,1.0
+chr1	6293821	.	CTCCCTCCCTCC	.	.	.	END=6293832;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:170.023:366.612,131.36:0.0,0.0:0.0,4.76004e-06,0.999995	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:218.038:326.675,113.385:0.0,0.0:0.0,9.94156e-08,1.0
+chr1	6301879	.	AATAAATAAATA	.	.	.	END=6301890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:268.841:366.612,131.36:0.0,0.0:0.0,2.64398e-07,1.0	0/0:42:1.0:3,3:3-3,3-3:23,17,0,2:3,23:2,2:261.177:326.675,113.385:0.0,0.0:0.0,3.68189e-07,1.0
+chr1	6303590	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6303631;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:44:0.937064:25,25:22-25,22-25:14,11,0,18:24,3|25,11:5,1|9,2|10,1|12,2|13,2|14,3|15,1|16,1|18,1|20,1|21,1|22,1|23,1:316.407:366.612,131.36:0.915721,0.915721:0.0,3.48342e-05,0.999964	0/1:52:0.873441:21,23:21-21,20-23:14,13,0,24:20,3|21,9|22,2:4,1|5,1|6,2|7,1|8,1|9,3|10,1|11,2|13,1|15,3|16,2|18,1|19,1|20,3|23,1:393.598:326.675,113.385:0.0990099,1.0187:1.21109e-14,2.029e-06,1.0
+chr1	6311549	.	GGTGGTGGTGGT	.	.	.	END=6311560;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998851:4,4:4-4,4-4:14,11,0,0:4,14:NULL:160.95:366.612,131.36:0.0,0.0:0.0,0.000681921,0.999323	0/0:25:0.999576:4,4:4-4,4-4:15,10,0,0:4,15:NULL:155.49:326.675,113.385:0.0,0.0:0.0,0.000278707,0.999721
+chr1	6312247	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	.	END=6312294;RU=tccc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.0916072:12,12:11-13,11-13:0,16,0,9:NULL:3,1|4,1|6,1|8,1|9,2|10,1|11,2:209.337:366.612,131.36:0.790097,0.790097:0.120643,0.4686,0.410951	0/0:16:0.519107:12,12:11-12,11-12:4,6,0,5:12,4:3,1|4,2|8,1|10,1:109.704:326.675,113.385:0.486863,0.486863:3.2532e-09,0.268059,0.731941
+chr1	6312789	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6312844;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.30309:31,32:28-33,28-33:2,16,0,17:31,2:6,1|12,2|13,1|14,3|16,2|19,1|20,2|21,1|22,2|26,1|32,1:298.451:366.612,131.36:0.815616,0.844549:0.0,0.0,1.0	0/0:28:0.233564:28,28:25-29,25-29:2,11,0,12:28,2:6,1|7,1|8,1|12,1|13,1|14,1|19,1|21,2|26,1|27,1|28,1:211.077:326.675,113.385:1.44649,1.44649:1.4493e-10,0.228072,0.771956
+chr1	6317256	.	AAAAACAAAAACAAAAAC	.	.	.	END=6317273;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:191.254:366.612,131.36:0.0,0.0:0.0,2.07463e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:29,7,0,0:3,29:NULL:180.098:326.675,113.385:0.0,0.0:0.0,1.09115e-08,1.0
+chr1	6324793	.	TTATTTATTTAT	.	.	.	END=6324804;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:237.826:366.612,131.36:0.0,0.0:0.0,7.68292e-08,1.0	0/0:24:0.999899:3,3:3-3,3-3:16,5,0,3:3,16:2,3:131.718:326.675,113.385:0.0,0.0:0.0,3.49466e-05,0.999964
+chr1	6326106	.	CTGCTGCTGCTG	.	.	.	END=6326117;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:25,18,0,0:4,25:NULL:261.316:366.612,131.36:0.0,0.0:0.0,2.9682e-07,1.0	0/0:32:0.999879:4,4:4-4,4-4:17,15,0,0:4,17:NULL:206.579:326.675,113.385:0.0,0.0:0.0,9.01237e-05,0.999911
+chr1	6328025	.	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	.	.	END=6328108;RU=tccctc;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:24:0.323834:5,14:3-13,11-15:2,10,0,11:5,2:2,1|3,1|4,2|5,1|6,1|10,1|11,1|12,1|13,1|14,1:178.554:366.612,131.36:1.80051,1.17184:8.72804e-09,1.0,2.80873e-36	0/0:19:0.276711:14,14:11-14,11-14:2,7,0,10:14,2:2,1|4,1|5,1|6,1|7,2|9,1|10,1|12,1|13,1:148.089:326.675,113.385:0.927845,0.927845:0.00346715,0.435722,0.560919
+chr1	6329503	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6329524;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999981:11,11:10-12,10-12:19,18,0,5:11,19:4,1|9,1|10,3:279.328:366.612,131.36:0.385249,0.385249:1.54556e-29,1.48909e-05,0.999986	0/0:49:0.355466:11,11:10-11,10-11:20,21,0,7:10,5|11,15:4,1|6,1|8,2|10,2|11,1:344.554:326.675,113.385:0.516562,0.516562:1.06726e-25,0.644578,0.355461
+chr1	6330314	.	TGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6330337;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.717376:21,21:19-21,19-21:6,18,0,13:21,6:8,2|11,1|12,2|13,3|16,2|18,1|19,2:296.872:366.612,131.36:0.481599,0.481599:0.0,0.0,1.0	0/0:37:0.999663:12,12:12-12,12-12:16,15,0,4:12,16:7,2|11,2:241.719:326.675,113.385:0.0,0.0:9.40051e-21,0.000149188,0.99985
+chr1	6332594	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=6332633;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.00001:9,9:9-9,9-9:21,18,0,17:9,21:2,1|3,1|4,4|5,3|6,2|7,2|8,4:375.193:366.612,131.36:0.0,0.0:0.0,1.36888e-07,1.0	0/0:39:0.999945:8,8:8-8,8-8:17,12,0,10:8,17:3,2|4,1|5,3|6,2|7,2:256.922:326.675,113.385:0.0,0.0:0.0,3.51892e-05,0.999964
+chr1	6332921	.	TGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=6332940;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999962:5,5:5-5,5-5:18,17,0,0:5,18:NULL:235.869:366.612,131.36:0.0,0.0:0.0,3.68095e-05,0.999964	0/0:31:1.00001:4,4:4-4,4-4:20,7,0,4:4,20:3,4:174.049:326.675,113.385:0.0,0.0:0.0,2.65643e-06,1.0
+chr1	6341827	.	TTTATTTATTTATTTATTTA	.	.	.	END=6341846;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999931:5,5:5-5,5-5:17,13,0,3:5,17:2,1|3,1|4,1:208.003:366.612,131.36:0.0,0.0:0.0,4.02341e-05,0.999963	0/0:31:0.997836:5,5:5-5,5-5:12,11,0,8:5,12:3,3|4,5:204.514:326.675,113.385:0.0,0.0:6.80122e-33,0.000836161,0.999166
+chr1	6345062	.	TATTATTATTATTATTATTATTATTATTAT	.	.	.	END=6345091;RU=tat;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.583909:10,10:9-10,9-10:10,10,0,4:9,2|10,8:5,1|7,1|8,2:173.1:366.612,131.36:0.492866,0.492866:1.20285e-11,0.412318,0.587755	0/0:21:0.71864:10,10:9-10,9-10:11,7,0,3:9,2|10,9:7,3:136.316:326.675,113.385:0.452422,0.452422:3.92122e-13,0.278474,0.721527
+chr1	6347126	.	ATTTATTTATTT	.	.	.	END=6347137;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:30,30,0,0:3,30:NULL:385.253:366.612,131.36:0.0,0.0:0.0,5.45747e-09,1.0	0/0:30:1.00001:3,3:3-4,3-4:21,8,0,0:3,21:NULL:157.025:326.675,113.385:0.21692,0.21692:0.0,2.56255e-06,1.0
+chr1	6348865	.	TTGTTGTTGTTGTTG	.	.	.	END=6348879;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:5,5:5-5,5-5:20,12,0,2:5,20:4,1|5,1:200.063:366.612,131.36:0.0,0.0:0.0,2.3945e-06,1.0	0/0:41:1.0:5,5:5-5,5-5:27,9,0,5:5,27:4,5:225.486:326.675,113.385:0.0,0.0:0.0,1.41317e-08,1.0
+chr1	6354453	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6354502;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.260449:31,37:28-31,28-38:2,10,0,8:31,2:7,1|8,1|12,1|19,1|28,1|29,1|32,1|36,1:170.006:366.612,131.36:1.55707,3.13366:0.0,0.0,1.0	0/0:37:0.614482:25,25:19-25,19-25:8,17,0,10:24,2|25,6:5,2|6,1|7,1|13,1|17,1|19,1|20,2|22,1:280.44:326.675,113.385:2.29536,2.29536:5.97258e-07,0.33895,0.661073
+chr1	6354954	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6354981;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:35:0.0666914:29,36:23-36,27-37:0,18,0,17:NULL:5,1|7,1|8,1|14,1|16,1|17,1|19,1|22,3|23,1|26,1|27,2|28,1|29,1|36,1:297.47:366.612,131.36:4.02078,3.49958:0.0,0.00311768,0.99689	1/0:24:0.801285:13,14:13-14,14-14:12,8,0,4:13,4|14,8:7,1|8,2|11,1:159.248:326.675,113.385:0.494455,0.0:1.73115e-09,0.801783,0.198264
+chr1	6355000	.	AGGCAGGCAGGC	.	.	.	END=6355011;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:170.882:366.612,131.36:0.0,0.0:0.0,6.52171e-06,0.999994	0/0:32:0.999998:3,3:3-3,3-3:18,11,0,3:3,18:2,3:190.865:326.675,113.385:0.0,0.0:0.0,1.01497e-05,0.999993
+chr1	6357634	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6357691;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.00843527:1,1:1-8,1-8:0,13,0,0:NULL:NULL:117.297:366.612,131.36:2.03936,2.03936:0.854868,0.142426,0.00279405	2/2:23:0.132999:28,28:17-29,17-29:2,8,0,11:28,2:5,1|10,1|11,1|13,3|15,1|17,1|20,1|21,2:172.541:326.675,113.385:5.3983,5.3983:0.748314,0.241926,0.00978573
+chr1	6359367	.	CTGCTGCTGCTG	.	.	.	END=6359378;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:4,4:4-4,4-4:37,27,0,0:4,37:NULL:395.923:366.612,131.36:0.0,0.0:0.0,2.29575e-10,1.0	0/0:61:1.0:4,4:4-4,4-4:39,22,0,0:4,39:NULL:362.516:326.675,113.385:0.0,0.0:0.0,4.16911e-11,1.0
+chr1	6368193	.	CATCATCATCAT	.	.	.	END=6368204;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999976:4,4:4-4,4-4:18,7,0,0:4,18:NULL:145.628:366.612,131.36:0.0,0.0:0.0,3.0766e-05,0.999971	0/0:39:1.0:4,4:4-5,4-5:30,8,0,0:4,30:NULL:188.186:326.675,113.385:0.236383,0.236383:0.0,7.14351e-09,1.0
+chr1	6368347	.	TTTATTTATTTATTTATTTA	TTTA,TTTATTTA	.	.	END=6368366;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:19:0.165475:1,2:1-4,1-4:0,19,0,0:NULL:NULL:196.82:366.612,131.36:0.868696,0.813208:0.728826,0.258439,0.0127586	0/0:30:0.997218:5,5:5-5,5-5:12,18,0,0:5,12:NULL:207.885:326.675,113.385:0.0,0.0:1.13771e-33,0.00223835,0.997768
+chr1	6371007	.	AGGTAGGTAGGT	.	.	.	END=6371018;RU=aggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:27,20,0,3:3,27:2,3:310.643:366.612,131.36:0.0,0.0:0.0,5.70152e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:259.845:326.675,113.385:0.0,0.0:0.0,1.20261e-07,1.0
+chr1	6371335	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=6371382;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.578901:9,9:8-10,8-10:9,13,0,3:8,2|9,7:5,1|6,1|7,1:185.232:366.612,131.36:0.598171,0.598171:1.0,0.0,0.0	2/2:4:0.026833:23,23:21-25,21-25:0,3,0,0:NULL:NULL:31.1618:326.675,113.385:0.859164,0.859164:0.231877,0.505364,0.262804
+chr1	6379206	.	AAACAAACAAAC	.	.	.	END=6379217;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:19,15,0,4:3,19:2,4:244.686:366.612,131.36:0.0,0.0:0.0,6.60564e-06,0.999994	0/0:47:1.0:3,3:3-3,3-3:36,11,0,0:3,36:NULL:244.338:326.675,113.385:0.0,0.0:0.0,7.01717e-11,1.0
+chr1	6379384	.	TGTTTTGTTTTGTTT	.	.	.	END=6379398;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999979:3,3:3-3,3-3:18,13,0,0:3,18:NULL:193.535:366.612,131.36:0.0,0.0:0.0,2.71137e-05,0.999972	0/0:29:1.0:3,3:3-3,3-3:19,7,0,3:3,19:2,3:161.935:326.675,113.385:0.0,0.0:0.0,4.73307e-06,0.999995
+chr1	6386715	.	GCCAGCCAGCCA	.	.	.	END=6386726;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:25,17,0,2:3,25:2,2:277.144:366.612,131.36:0.0,0.0:0.0,7.65198e-08,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:170.238:326.675,113.385:0.0,0.0:0.0,2.20524e-06,1.0
+chr1	6389231	.	TGAGAATGAGAATGAGAA	.	.	.	END=6389248;RU=tgagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:33,16,0,2:3,33:2,2:292.834:366.612,131.36:0.0,0.0:0.0,4.11387e-10,1.0	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:227.167:326.675,113.385:0.0,0.0:0.0,1.66007e-06,1.0
+chr1	6390202	.	TATATATATATATATATATATA	TATATATATATATATATATA	.	.	END=6390223;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.999128:10,10:9-10,9-10:15,11,0,0:10,15:NULL:167.229:366.612,131.36:0.195027,0.195027:0.999789,0.000212479,1.24383e-18	0/0:11:0.886395:11,11:11-11,11-11:7,4,0,0:11,7:NULL:68.6352:326.675,113.385:0.0,0.0:7.10004e-08,0.0573829,0.942704
+chr1	6390677	.	ACATACATACATACATACATACATACATACAT	ACATACATACATACATACATACATACATACATACAT	.	.	END=6390708;RU=acat;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:0.786703:8,9:8-9,9-9:12,20,0,24:8,2|9,10:2,1|3,2|4,3|5,4|6,6|7,3|8,5:412.331:366.612,131.36:0.491073,0.0:0.0,2.75677e-05,0.999972	0/0:40:0.999966:8,8:8-8,8-8:18,16,0,6:8,18:3,2|6,2|7,2:261.855:326.675,113.385:0.0,0.0:2.71797e-36,3.02089e-05,0.999971
+chr1	6391128	.	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG	.	.	.	END=6391159;RU=tctg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:0.99995:8,8:8-8,8-8:17,26,0,11:8,17:2,1|3,1|4,2|5,2|6,2|7,3:385.269:366.612,131.36:0.0,0.0:0.0,3.36673e-05,0.99997	0/0:24:0.998722:8,8:8-8,8-8:13,5,0,6:8,13:2,1|3,3|4,1|6,1:142.657:326.675,113.385:0.0,0.0:3.41302e-38,0.000658743,0.999346
+chr1	6391479	.	CAAACAAACAAA	.	.	.	END=6391490;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:23,25,0,3:3,23:2,3:351.872:366.612,131.36:0.0,0.0:0.0,2.91798e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:213.709:326.675,113.385:0.0,0.0:0.0,4.31277e-07,1.0
+chr1	6394101	.	AAAACAAAACAAAAC	.	.	.	END=6394115;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999747:3,3:3-3,3-3:16,17,0,0:3,16:NULL:215.353:366.612,131.36:0.0,0.0:0.0,0.000173326,0.999827	0/0:29:0.999992:3,3:3-3,3-3:18,9,0,2:3,18:2,2:166.137:326.675,113.385:0.0,0.0:0.0,1.259e-05,0.999987
+chr1	6403250	.	TGTTTGTTTGTT	.	.	.	END=6403261;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.996921:3,3:3-3,3-3:12,9,0,0:3,12:NULL:130.745:366.612,131.36:0.0,0.0:7.23095e-40,0.00189695,0.998109	0/0:23:0.998589:3,3:3-3,3-3:12,8,0,3:3,12:2,3:146.182:326.675,113.385:0.0,0.0:1.93543e-40,0.000508567,0.999493
+chr1	6410410	.	CCACCCCCACCCCCACCC	.	.	.	END=6410427;RU=ccaccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999998:3,3:3-3,3-3:21,28,0,4:3,21:2,4:369.966:366.612,131.36:0.0,0.0:0.0,4.48486e-06,0.999995	0/0:37:0.999862:3,3:3-3,3-3:17,20,0,0:3,17:NULL:262.94:326.675,113.385:0.0,0.0:0.0,0.000146166,0.999857
+chr1	6411672	.	CCACCACCACCA	CCACCACCACCACCA	.	.	END=6411683;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.933194:5,5:5-5,5-5:7,19,0,0:5,7:NULL:196.656:366.612,131.36:0.0,0.0:7.30312e-38,0.0317498,0.968307	0/0:24:0.984921:4,4:4-4,4-4:10,14,0,0:4,10:NULL:168.232:326.675,113.385:0.0,0.0:1.06299e-23,0.0104089,0.989612
+chr1	6412880	.	TATGTATGTATG	.	.	.	END=6412891;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:243.736:366.612,131.36:0.0,0.0:0.0,6.45001e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:151.166:326.675,113.385:0.0,0.0:0.0,2.57264e-07,1.0
+chr1	6415172	.	TATATATATATATATATATATA	TATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA	.	.	END=6415193;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:11:0.231832:12,18:12-18,12-18:2,5,0,2:12,2:6,1|17,1:72.2046:366.612,131.36:1.68794,1.37135:3.04941e-11,0.000441063,0.999561	0/0:9:0.571699:11,11:7-11,7-11:5,3,0,0:11,5:NULL:50.6524:326.675,113.385:1.9881,1.9881:5.17558e-08,0.304474,0.695536
+chr1	6417480	.	AGCTGGAGAAGCTGGAGAAGCTGGAGAAGCTGGAGA	.	.	.	END=6417515;RU=agctggaga;PERIOD=9;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999987:4,4:4-4,4-4:19,20,0,3:4,19:2,1|3,2:285.284:366.612,131.36:0.0,0.0:0.0,2.44925e-05,0.999978	0/0:44:0.999971:4,4:4-4,4-4:18,22,0,4:4,18:2,1|3,3:299.858:326.675,113.385:0.0,0.0:0.0,3.82692e-05,0.999963
+chr1	6419181	.	TTCCTTTCCTTTCCT	.	.	.	END=6419195;RU=ttcct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,18,0,2:3,24:2,2:278.409:366.612,131.36:0.0,0.0:0.0,3.33255e-07,1.0	0/0:69:1.0:3,3:3-3,3-3:57,12,0,0:3,57:NULL:335.583:326.675,113.385:0.0,0.0:0.0,4.64831e-17,1.0
+chr1	6419368	.	TCTCTTTCTCTTTCTCTTTCTCTT	.	.	.	END=6419391;RU=tctctt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999994:4,4:4-4,4-4:20,18,0,0:4,20:NULL:245.529:366.612,131.36:0.139319,0.139319:0.0,1.87967e-05,0.999985	0/0:49:1.0:4,4:4-4,4-4:30,13,0,6:4,30:3,6:283.516:326.675,113.385:0.0,0.0:0.0,2.87679e-09,1.0
+chr1	6419434	.	CTCCTCCTCCTCCTCCTCCTC	CTCCTCCTCCTCCTCCTC	.	.	END=6419454;RU=ctc;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.0:6,6:6-6,6-6:26,18,0,5:6,26:3,2|4,2|5,1:306.28:366.612,131.36:0.0,0.0:1.0,9.48715e-08,0.0	0/0:20:0.997097:7,7:3-7,3-7:13,6,0,0:7,13:NULL:113.007:326.675,113.385:1.92721,1.92721:4.64473e-22,0.00220684,0.997799
+chr1	6424394	.	TTGTTGTTGTTG	.	.	.	END=6424405;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999994:4,4:4-4,4-4:19,12,0,0:4,19:NULL:180.0:366.612,131.36:0.0,0.0:0.0,1.33005e-05,0.999987	0/0:26:0.999895:4,4:4-4,4-4:16,8,0,2:4,16:3,2:149.289:326.675,113.385:0.0,0.0:0.0,5.31242e-05,0.999948
+chr1	6427092	.	ATATATATATATATATATATATATAT	AT	.	.	END=6427117;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0172122:1,1:1-3,1-3:0,11,0,0:NULL:NULL:99.9566:366.612,131.36:0.48807,0.48807:0.560778,0.398671,0.0406984	0/0:12:0.373616:13,13:9-13,9-13:9,1,0,0:12,3|13,6:NULL:55.0636:326.675,113.385:1.49816,1.49816:5.54377e-05,0.610766,0.389242
+chr1	6427177	.	ATTTATTTATTTATTT	ATTTATTT	.	.	END=6427192;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0306123:2,2:1-3,1-3:0,11,0,0:NULL:NULL:101.966:366.612,131.36:0.732539,0.732539:0.248395,0.537449,0.214171	0/0:20:0.981664:4,4:4-4,4-4:9,9,0,2:4,9:3,2:132.02:326.675,113.385:0.0,0.0:7.25624e-25,0.00914487,0.990874
+chr1	6441337	.	GCCGCCGCCGCCGCC	GCCGCCGCCGCC	.	.	END=6441351;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:1.0:4,4:4-4,4-4:32,29,0,0:4,32:NULL:391.05:366.612,131.36:0.0,0.0:1.0,5.48193e-10,0.0	0/0:73:1.0:5,5:5-5,5-5:48,22,0,3:5,48:3,2|4,1:418.21:326.675,113.385:0.0,0.0:0.0,3.65892e-14,1.0
+chr1	6441476	.	GCCGGCCGGCCG	.	.	.	END=6441487;RU=gccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:3,3:3-3,3-3:34,26,0,3:3,34:2,3:391.166:366.612,131.36:0.0,0.0:0.0,2.98874e-10,1.0	0/0:86:1.0:3,3:3-3,3-3:39,39,0,8:3,39:2,8:565.491:326.675,113.385:0.0,0.0:0.0,1.5715e-11,1.0
+chr1	6442029	.	AACAACAACAACAACAACAACAACAACAACAACAAC	AACAACAACAACAACAACAACAACAACAACAACAACAAC	.	.	END=6442064;RU=aac;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.868709:13,13:13-13,13-13:6,18,0,0:13,6:NULL:198.809:366.612,131.36:0.0,0.0:2.86275e-18,0.0676645,0.932431	0/0:42:1.0:12,12:12-12,12-12:19,17,0,6:12,19:4,1|6,1|10,2|11,2:285.658:326.675,113.385:0.0,0.0:0.0,7.73598e-06,0.999994
+chr1	6442239	.	TAAGATTGTAAGATTGTAAGATTG	.	.	.	END=6442262;RU=taagattg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,20,0,0:3,24:NULL:278.112:366.612,131.36:0.0,0.0:0.0,1.08989e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:253.768:326.675,113.385:0.0,0.0:0.0,2.23496e-07,1.0
+chr1	6443834	.	GTTGGTTGGTTG	.	.	.	END=6443845;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:216.65:366.612,131.36:0.0,0.0:0.0,1.78562e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:29,4,0,0:3,29:NULL:154.01:326.675,113.385:0.0,0.0:0.0,7.97915e-09,1.0
+chr1	6444502	.	CTGCTGCTGCTG	.	.	.	END=6444513;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:220.241:366.612,131.36:0.0,0.0:0.0,5.32636e-06,0.999995	0/0:34:0.999896:4,4:4-4,4-4:17,17,0,0:4,17:NULL:221.897:326.675,113.385:0.0,0.0:0.0,8.4194e-05,0.999918
+chr1	6445953	.	TATTTTATTTTATTTTATTTTATTT	TATTTTATTTTATTT	.	.	END=6445977;RU=tattt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.986539:3,3:3-3,3-3:10,5,0,0:3,10:NULL:89.0863:366.612,131.36:0.0,0.0:0.996391,0.00361845,7.5186e-31	0/0:15:0.959768:5,5:5-5,5-5:8,5,0,2:5,8:3,1|4,1:94.2959:326.675,113.385:0.0,0.0:1.15631e-17,0.0226392,0.977405
+chr1	6450086	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6450121;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:15:0.251893:15,33:15-20,19-36:5,7,0,2:15,3|19,2:13,1|33,1:116.95:366.612,131.36:2.13292,6.6362:8.74514e-06,0.971979,0.0280665	2/0:29:0.93274:17,18:17-18,18-18:15,6,0,7:17,6|18,9:4,1|5,1|6,1|7,2|10,1|15,1:190.025:326.675,113.385:0.437216,0.0:1.14586e-09,0.932763,0.0673315
+chr1	6453097	.	TTTGTTTGTTTG	.	.	.	END=6453108;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999862:3,3:3-3,3-3:16,13,0,0:3,16:NULL:180.898:366.612,131.36:0.0,0.0:0.0,0.000100186,0.999903	0/0:32:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:174.755:326.675,113.385:0.0,0.0:0.0,1.27653e-06,1.0
+chr1	6454520	.	ATCATCATCATCATC	.	.	.	END=6454534;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:5,5:5-5,5-5:28,24,0,3:5,28:4,3:348.08:366.612,131.36:0.0,0.0:0.0,1.93185e-08,1.0	0/0:50:1.0:5,5:5-5,5-5:31,16,0,3:5,31:4,3:293.005:326.675,113.385:0.0,0.0:0.0,1.47837e-09,1.0
+chr1	6455399	.	AGAAAAGAAAAGAAA	.	.	.	END=6455413;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996704:3,3:3-3,3-3:11,18,0,0:3,11:NULL:208.198:366.612,131.36:0.0,0.0:5.81437e-37,0.00226207,0.997745	0/0:22:0.997507:3,3:3-3,3-3:12,10,0,0:3,12:NULL:142.479:326.675,113.385:0.0,0.0:1.9739e-40,0.00158037,0.998427
+chr1	6456272	.	ACACACACACACACACACACAC	ACACACACACACACACACACACAC	.	.	END=6456293;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:12,12:12-12,12-12:24,20,0,10:12,24:5,3|9,1|11,6:355.119:366.612,131.36:0.0,0.0:0.0,4.39573e-09,1.0	0/0:54:1.0:11,11:11-11,11-11:21,21,0,11:11,21:4,1|5,1|6,3|7,1|8,2|9,1|10,2:368.916:326.675,113.385:0.0,0.0:4.12443e-30,4.83856e-06,0.999995
+chr1	6456451	.	GTGGTGGTGGTGGTG	.	.	.	END=6456465;RU=gtg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:5,5:5-5,5-5:30,15,0,5:5,30:4,5:290.961:366.612,131.36:0.0,0.0:0.0,1.93579e-09,1.0	0/0:56:1.0:5,5:5-5,5-5:38,13,0,5:5,38:4,5:310.504:326.675,113.385:0.0,0.0:0.0,9.48682e-12,1.0
+chr1	6459379	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6459398;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999802:4,4:4-4,4-4:16,5,0,0:4,16:NULL:110.009:366.612,131.36:0.0,0.0:0.0,0.000120563,0.99988	0/0:23:0.999975:4,4:4-4,4-4:18,5,0,0:4,18:NULL:119.271:326.675,113.385:0.0,0.0:0.0,3.32964e-05,0.99997
+chr1	6461977	.	TTTTCTTTTCTTTTC	.	.	.	END=6461991;RU=ttttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999407:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.461:366.612,131.36:0.0,0.0:0.0,0.000331563,0.999673	0/0:32:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:180.804:326.675,113.385:0.0,0.0:0.0,6.43755e-06,0.999995
+chr1	6467447	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	.	END=6467494;RU=agaa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.865652:12,12:12-12,12-12:5,14,0,7:12,5:5,2|8,2|10,1|11,2:202.893:366.612,131.36:0.0,0.0:7.7543e-13,0.0593063,0.940778	0/0:27:0.718776:12,12:9-12,9-12:6,16,0,5:12,6:3,1|4,2|7,1|10,1:220.248:326.675,113.385:0.574428,0.574428:6.58609e-14,0.254121,0.745886
+chr1	6467698	.	CCCTTCCCTTCCCTT	.	.	.	END=6467712;RU=ccctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:3,3:3-3,3-3:17,19,0,3:3,17:2,3:261.031:366.612,131.36:0.0,0.0:0.0,3.89303e-05,0.999963	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:237.557:326.675,113.385:0.0,0.0:0.0,1.90104e-07,1.0
+chr1	6467732	.	TGTGTGTGTGTGTG	.	.	.	END=6467745;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999988:7,7:6-7,6-7:19,24,0,4:7,19:5,1|6,3:323.777:366.612,131.36:0.169767,0.169767:1.22758e-37,8.88063e-06,0.999994	0/0:45:1.0:7,7:7-7,7-7:26,13,0,5:7,26:6,4|7,1:264.22:326.675,113.385:0.0990099,0.0990099:0.0,2.91863e-08,1.0
+chr1	6470121	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6470162;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:52:0.419116:25,25:24-25,24-25:12,20,0,19:24,4|25,8:6,1|7,1|8,1|9,2|10,1|11,1|13,1|15,1|16,3|17,1|20,1|21,1|22,2|24,2:396.669:366.612,131.36:0.491073,0.491073:0.0,1.55313e-05,0.999986	0/1:71:0.984002:21,22:20-21,20-22:16,24,0,31:20,5|21,9|22,2:4,1|5,2|6,2|8,4|9,3|10,1|11,1|13,4|14,2|15,3|16,1|19,3|20,3|22,1:557.227:326.675,113.385:0.390807,0.725277:3.74851e-13,0.00585111,0.994165
+chr1	6474556	.	TTGTTGTTGTTG	.	.	.	END=6474567;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.00001:4,4:4-4,4-4:22,24,0,0:4,22:NULL:309.116:366.612,131.36:0.0,0.0:0.0,2.64898e-06,1.0	0/0:34:1.0:4,4:4-4,4-4:19,13,0,2:4,19:3,2:211.583:326.675,113.385:0.0,0.0:0.0,8.20497e-06,0.999994
+chr1	6479132	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6479171;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.818742:21,21:18-21,18-21:7,18,0,6:21,7:6,1|7,1|9,1|12,1|18,2:244.382:366.612,131.36:1.43581,1.43581:9.04679e-12,0.0961955,0.903909	0/1:36:0.701656:20,21:19-20,19-21:11,16,0,9:19,3|20,5|21,3:7,2|8,2|9,1|10,1|15,1|18,1|19,1:281.897:326.675,113.385:0.425627,0.791708:2.93234e-06,0.159303,0.84077
+chr1	6481961	.	AATAAATAAATA	.	.	.	END=6481972;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999864:3,3:3-3,3-3:16,8,0,0:3,16:NULL:135.705:366.612,131.36:0.0,0.0:0.0,6.6863e-05,0.999934	0/0:35:0.999832:3,3:3-3,3-3:16,19,0,0:3,16:NULL:233.09:326.675,113.385:0.0,0.0:0.0,0.000120095,0.999881
+chr1	6485320	.	AATTTAATTTAATTT	.	.	.	END=6485334;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998443:3,3:3-3,3-3:13,15,0,0:3,13:NULL:191.214:366.612,131.36:0.0,0.0:3.21756e-38,0.00108093,0.998922	0/0:19:0.988664:3,3:3-3,3-3:10,9,0,0:3,10:NULL:122.733:326.675,113.385:0.0,0.0:2.01741e-29,0.0065498,0.993466
+chr1	6485835	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6485900;RU=tc;PERIOD=2;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:33:0.296222:31,31:30-32,30-32:2,17,0,12:31,2:6,1|7,1|11,1|13,2|20,1|22,1|23,1|26,1|27,1|29,1|30,1:262.25:366.612,131.36:0.696174,0.696174:0.758903,0.240269,0.000848255	1/1:28:0.0592474:30,30:29-33,29-33:0,16,0,10:NULL:7,1|8,1|10,1|13,1|20,1|25,2|26,1|27,1|30,1:233.514:326.675,113.385:1.16057,1.16057:0.424781,0.462446,0.112889
+chr1	6486465	.	ATAATAATAATAATAATA	ATAATAATAATAATA	.	.	END=6486482;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.00001:5,5:5-5,5-5:22,15,0,0:5,22:NULL:226.929:366.612,131.36:0.0,0.0:1.0,1.61118e-06,1.10998e-39	0/0:31:0.848806:6,6:5-7,5-7:14,16,0,0:6,12|7,2:NULL:212.196:326.675,113.385:0.573403,0.573403:4.96e-21,0.00105893,0.998945
+chr1	6486709	.	GAGGTAGAGGTAGAGGTA	.	.	.	END=6486726;RU=gaggta;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:82:1.0:3,3:3-3,3-3:31,51,0,0:3,31:NULL:573.653:366.612,131.36:0.0,0.0:0.0,2.10299e-08,1.0	0/0:64:1.0:3,3:3-3,3-3:26,38,0,0:3,26:NULL:437.551:326.675,113.385:0.0,0.0:0.0,3.27061e-07,1.0
+chr1	6489307	.	AACCAACCAACCAACCAACCAACCAACCAACC	AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC	.	.	END=6489338;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.25467:13,13:11-13,11-13:2,7,0,2:13,2:4,1|9,1:89.9995:366.612,131.36:0.634282,0.634282:0.0,0.0,1.0	0/0:35:0.999807:8,8:8-8,8-8:16,14,0,5:8,16:2,1|3,1|4,1|7,2:234.493:326.675,113.385:0.0,0.0:9.71125e-37,0.000126954,0.999873
+chr1	6497659	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6497698;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:52:0.427282:22,25:22-22,19-26:10,26,0,13:22,10:5,1|6,1|11,2|12,2|14,1|15,2|18,3|25,1:396.318:366.612,131.36:0.29703,1.7353:6.86936e-27,4.79342e-07,1.0	0/0:54:0.961433:20,20:18-20,18-20:15,22,0,15:19,3|20,12:4,1|5,1|11,2|12,2|14,1|15,3|16,1|17,1|18,2|19,1:397.666:326.675,113.385:0.694341,0.694341:2.62129e-12,0.0371701,0.962893
+chr1	6507213	.	GGCAGGCAGGCA	.	.	.	END=6507224;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:0.999988:3,3:3-3,3-3:20,54,0,0:3,20:NULL:564.517:366.612,131.36:0.0,0.0:0.0,2.21705e-05,0.999979	0/0:66:1.0:3,3:3-3,3-3:19,41,0,6:3,19:2,6:480.663:326.675,113.385:0.0,0.0:0.0,5.54561e-06,0.999995
+chr1	6507332	.	CACACACACACACACA	CACACACACACA	.	.	END=6507347;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.238502:6,6:3-6,3-6:2,29,0,0:6,2:NULL:276.117:366.612,131.36:1.17884,1.17884:0.890963,0.109137,2.63841e-08	0/0:29:0.217846:8,8:5-8,5-8:2,27,0,0:8,2:NULL:258.606:326.675,113.385:1.2144,1.2144:0.000712133,0.468084,0.531312
+chr1	6507470	.	GTTGTTGTTGTT	.	.	.	END=6507481;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:68:1.0:4,4:4-4,4-4:40,22,0,4:4,40:3,4:391.267:366.612,131.36:0.0,0.0:0.0,2.86979e-12,1.0	0/0:42:1.0:4,4:4-4,4-4:30,9,0,3:4,30:3,3:232.787:326.675,113.385:0.0,0.0:0.0,3.9359e-09,1.0
+chr1	6509128	.	AAGAAAGAAAGA	.	.	.	END=6509139;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:27,23,0,0:3,27:NULL:320.759:366.612,131.36:0.0,0.0:0.0,5.62015e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:223.052:326.675,113.385:0.0,0.0:0.0,5.27716e-08,1.0
+chr1	6509313	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6509338;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:49:0.997491:17,17:13-17,13-17:17,15,0,15:16,2|17,15:5,1|6,4|7,1|8,1|12,1|13,1|14,1|16,5:333.024:366.612,131.36:0.974229,0.974229:0.0,6.11081e-07,1.0	0/1:32:0.646039:13,14:13-13,13-14:11,15,0,5:13,11:8,2|9,1|10,1|14,1:229.145:326.675,113.385:0.0,0.484441:2.72351e-19,9.01106e-08,1.0
+chr1	6509599	.	AAAAGAAAAGAAAAG	.	.	.	END=6509613;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999935:3,3:3-3,3-3:16,15,0,4:3,16:2,4:228.976:366.612,131.36:0.0,0.0:0.0,4.68756e-05,0.999956	0/0:26:0.999312:3,3:3-3,3-3:14,12,0,0:3,14:NULL:169.371:326.675,113.385:0.0,0.0:0.0,0.000471465,0.99953
+chr1	6513189	.	ACAAGTACAAGTACAAGT	ACAAGT	.	.	END=6513206;RU=acaagt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0778033:1,1:1-3,1-3:0,14,0,0:NULL:NULL:127.912:366.612,131.36:0.916684,0.916684:0.198352,0.51361,0.288123	0/0:28:0.999984:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.592:326.675,113.385:0.0,0.0:0.0,2.41846e-05,0.999978
+chr1	6519516	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC	.	.	END=6519555;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.326169:10,17:10-10,10-17:11,24,0,4:9,2|10,9:9,1|10,1|14,2:315.968:366.612,131.36:0.0,2.45293:1.0,0.0,0.0	0/0:35:0.811379:20,20:19-21,19-21:17,10,0,8:19,4|20,11|21,2:6,1|12,1|14,1|15,1|17,2|18,1|19,1:246.071:326.675,113.385:0.635209,0.635209:2.88909e-13,0.0495004,0.95058
+chr1	6519558	.	GTGTGTGTGTGTGTGTGT	GTGTGTGT	.	.	END=6519575;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.935555:4,4:4-5,4-5:8,24,0,0:4,8:NULL:254.948:366.612,131.36:0.469019,0.469019:1.0,0.0,0.0	0/0:24:0.999881:9,9:9-9,9-9:17,6,0,0:9,17:NULL:122.476:326.675,113.385:0.139319,0.139319:8.45691e-32,6.95839e-05,0.999933
+chr1	6520061	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=6520095;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:40:0.348329:5,7:5-5,5-8:22,10,0,8:5,22:3,3|5,1|7,4:251.551:366.612,131.36:0.0,0.516183:1.00958e-24,1.0,0.0	0/0:40:1.0:7,7:7-7,7-7:20,11,0,8:7,20:2,1|3,3|4,1|5,2|6,1:237.78:326.675,113.385:0.139319,0.139319:0.0,4.5035e-06,0.999995
+chr1	6520115	.	AACCAACCAACC	.	.	.	END=6520126;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.842359:3,3:3-3,3-3:6,9,0,0:3,6:NULL:104.041:366.612,131.36:0.0,0.0:8.02858e-22,0.0840801,0.916017	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.892:326.675,113.385:0.0,0.0:0.0,5.40295e-07,1.0
+chr1	6525229	.	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=6525264;RU=aaac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.0:7,7:7-7,7-7:27,13,0,4:7,27:3,1|6,3:259.229:366.612,131.36:0.0,0.0:1.0,2.10771e-08,0.0	0/0:41:1.0:9,9:9-9,9-9:19,15,0,7:9,19:3,1|4,2|5,1|6,1|8,2:266.151:326.675,113.385:0.0,0.0:0.0,8.39e-06,0.999994
+chr1	6525468	.	TGTGTGTGTGTGTGTG	.	.	.	END=6525483;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999729:8,8:8-8,8-8:15,20,0,5:8,15:6,4|7,1:286.139:366.612,131.36:0.0990099,0.0990099:4.7596e-28,0.000115341,0.999887	0/0:43:0.994747:8,8:7-8,7-8:29,10,0,4:7,4|8,25:4,1|5,2|7,1:253.989:326.675,113.385:0.419363,0.419363:4.07905e-40,0.00526366,0.994747
+chr1	6530019	.	AATTAATTAATT	.	.	.	END=6530030;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.92595:3,3:3-3,3-3:7,21,0,0:3,7:NULL:218.027:366.612,131.36:0.0,0.0:4.4995e-23,0.050793,0.949288	0/0:14:0.932457:3,3:3-3,3-3:7,7,0,0:3,7:NULL:92.1075:326.675,113.385:0.0,0.0:3.16866e-23,0.0352042,0.96486
+chr1	6540303	.	CAAAAACAAAAACAAAAA	.	.	.	END=6540320;RU=caaaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,19,0,3:3,23:2,3:280.557:366.612,131.36:0.0,0.0:0.0,2.94168e-07,1.0	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.404:326.675,113.385:0.0,0.0:0.0,1.50693e-06,1.0
+chr1	6542023	.	GTTTTGTTTTGTTTT	GTTTT	.	.	END=6542037;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0706208:1,1:1-4,1-4:0,12,0,0:NULL:NULL:111.332:366.612,131.36:1.20962,1.20962:0.24805,0.510238,0.241734	0/0:21:0.999747:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.451:326.675,113.385:0.0,0.0:0.0,0.000141988,0.999858
+chr1	6542152	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	END=6542199;RU=ttcc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:39:0.998437:11,12:11-11,9-12:7,20,0,12:11,5|12,2:2,1|3,2|4,2|5,4|6,2|8,1:306.906:366.612,131.36:0.0,0.705267:0.00121235,0.998792,2.93932e-09	0/0:21:0.996639:12,12:11-12,11-12:12,4,0,4:12,12:6,2|7,1|10,1:118.65:326.675,113.385:0.390807,0.390807:3.18866e-31,0.00190421,0.998102
+chr1	6549122	.	TATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATA	.	.	END=6549165;RU=ta;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:17:0.17645:19,19:17-19,17-19:2,11,0,4:19,2:4,1|5,1|8,1|17,1:144.179:366.612,131.36:0.542842,0.542842:0.871083,0.128396,0.000618529	1/3:11:0.028408:1,21:1-23,1-23:0,9,0,2:NULL:17,1|21,1:99.7489:326.675,113.385:8.54168,5.05515:0.263481,0.69884,0.0377403
+chr1	6555095	.	GTTGTTGTTGTT	.	.	.	END=6555106;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:24,20,0,0:4,24:NULL:282.923:366.612,131.36:0.0,0.0:0.0,1.12807e-06,1.0	0/0:43:1.0:4,4:4-4,4-4:30,11,0,2:4,30:3,2:230.61:326.675,113.385:0.0,0.0:0.0,4.15857e-09,1.0
+chr1	6557207	.	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	.	.	END=6557281;RU=ttc;PERIOD=3;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0444653:28,28:1-28,1-28:0,13,0,8:NULL:6,1|11,1|14,1|16,1|24,1|25,1|27,2:178.898:366.612,131.36:6.79896,6.79896:2.57014e-23,0.496631,0.503384	0/0:28:0.676758:25,25:25-25,25-25:5,7,0,16:25,5:3,2|4,1|9,1|10,1|12,1|14,3|15,1|16,1|17,2|20,1|22,1|23,1:208.385:326.675,113.385:0.0,0.0:2.55374e-08,0.150502,0.849579
+chr1	6558796	.	GGGTGGGTGGGT	.	.	.	END=6558807;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992568:3,3:3-3,3-3:10,12,0,0:3,10:NULL:147.84:366.612,131.36:0.0,0.0:1.03052e-29,0.00436478,0.995644	0/0:26:0.982124:3,3:3-3,3-3:9,17,0,0:3,9:NULL:193.248:326.675,113.385:0.0,0.0:1.17708e-26,0.0114446,0.988582
+chr1	6573728	.	TGTTTGTTTGTTTGTT	.	.	.	END=6573743;RU=tgtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:29,14,0,0:4,29:NULL:246.303:366.612,131.36:0.0,0.0:0.0,1.95774e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:24,8,0,0:4,24:NULL:166.086:326.675,113.385:0.0,0.0:0.0,4.58797e-07,1.0
+chr1	6574488	.	TATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=6574515;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999898:9,9:9-9,9-9:16,11,0,3:9,16:7,1|8,2:194.239:366.612,131.36:0.0990099,0.0990099:0.0,9.4853e-06,0.999993	0/0:30:0.999572:7,7:7-7,7-7:14,9,0,7:7,14:2,1|3,2|5,2|6,2:187.963:326.675,113.385:0.0,0.0:1.16039e-33,0.000195257,0.999805
+chr1	6575450	.	TTTATTTATTTATTTA	.	.	.	END=6575465;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:26,8,0,0:4,26:NULL:175.847:366.612,131.36:0.0,0.0:0.0,1.47876e-07,1.0	0/0:29:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:151.885:326.675,113.385:0.0,0.0:0.0,2.16543e-06,1.0
+chr1	6579057	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT	.	.	END=6579090;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:1.0:10,10:10-10,10-10:32,16,0,4:9,2|10,30:5,1|8,1|9,2:311.614:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:40:0.952174:17,17:16-18,16-18:15,12,0,12:16,3|17,12:5,1|9,1|10,1|11,2|12,2|14,1|15,3|16,1:284.142:326.675,113.385:0.382183,0.382183:4.47207e-14,0.0474327,0.952644
+chr1	6581899	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6581934;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.0409144:18,18:16-19,16-19:0,5,0,7:NULL:5,2|8,1|14,1|15,1|16,1|17,1:102.022:366.612,131.36:2.04575,2.04575:0.143728,0.552506,0.303883	1/0:23:0.741081:17,18:16-18,16-18:4,10,0,8:17,2|18,2:5,1|11,2|13,2|14,1|16,1|17,1:178.74:326.675,113.385:0.5634,0.711908:0.0240193,0.808404,0.167687
+chr1	6582216	.	TTTTGTTTTGTTTTG	.	.	.	END=6582230;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999709:3,3:3-3,3-3:15,6,0,0:3,15:NULL:115.111:366.612,131.36:0.0,0.0:0.0,0.000175043,0.999827	0/0:24:0.999727:3,3:3-3,3-3:15,9,0,0:3,15:NULL:141.616:326.675,113.385:0.0,0.0:0.0,0.000159982,0.999842
+chr1	6589837	.	AATGAATGAATG	.	.	.	END=6589848;RU=aatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:2-3,2-3:25,7,0,0:3,25:NULL:162.414:366.612,131.36:0.169767,0.169767:0.0,1.1825e-07,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:210.49:326.675,113.385:0.0,0.0:0.0,2.6585e-06,1.0
+chr1	6589908	.	AGTCAGTCAGTC	.	.	.	END=6589919;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999868:3,3:3-3,3-3:16,17,0,0:3,16:NULL:212.311:366.612,131.36:0.0,0.0:0.0,7.16104e-05,0.999932	0/0:45:1.0:3,3:3-3,3-3:22,21,0,2:3,22:2,2:286.925:326.675,113.385:0.0,0.0:0.0,6.81537e-07,1.0
+chr1	6591632	.	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	.	.	END=6591681;RU=ttcct;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:20:1.0:7,10:7-7,10-10:9,7,0,4:7,5|10,4:3,2|5,1|6,1:133.243:366.612,131.36:0.29703,0.0:8.67611e-10,1.0,2.09003e-09	0/0:28:0.970062:10,10:10-10,10-10:8,10,0,10:10,8:2,1|4,1|5,1|6,3|7,2|8,1|10,1:193.083:326.675,113.385:0.0,0.0:1.12305e-28,0.0144447,0.985586
+chr1	6591950	.	TCCTTTCCTTTCCTTTCCTT	.	.	.	END=6591969;RU=tcctt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.576692:4,4:4-4,4-4:4,2,0,0:4,4:NULL:32.3285:366.612,131.36:0.29703,0.29703:1.45405e-12,0.214419,0.785623	0/0:26:1.00001:4,4:4-4,4-4:23,1,0,2:4,23:2,1|3,1:113.988:326.675,113.385:0.0,0.0:0.0,4.22388e-07,1.0
+chr1	6598126	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6598147;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999831:11,11:11-11,11-11:17,12,0,2:11,17:6,1|8,1:193.141:366.612,131.36:0.0,0.0:6.30627e-27,0.000104113,0.999896	0/0:32:0.99526:11,11:10-11,10-11:17,12,0,3:10,2|11,15:6,1|7,1|8,1:215.682:326.675,113.385:0.195027,0.195027:7.28222e-22,0.00466829,0.995342
+chr1	6601383	.	TGTGTGTGTGTG	.	.	.	END=6601394;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999591:6,6:5-6,5-6:15,18,0,0:6,15:NULL:219.972:366.612,131.36:0.437216,0.437216:4.48063e-35,0.000300498,0.999704	0/0:34:1.00001:6,6:6-6,6-6:22,7,0,5:6,22:5,5:192.526:326.675,113.385:0.0,0.0:0.0,6.67475e-07,1.0
+chr1	6601485	.	AGGGAGGGAGGG	.	.	.	END=6601496;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:23,10,0,0:3,23:NULL:177.924:366.612,131.36:0.0,0.0:0.0,5.48719e-07,1.0	0/0:45:1.0:3,3:3-3,3-3:27,16,0,2:3,27:2,2:260.68:326.675,113.385:0.0,0.0:0.0,2.88615e-08,1.0
+chr1	6602519	.	TTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTATTA	.	.	END=6602545;RU=tta;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0356188:12,12:1-12,1-12:0,9,0,5:NULL:4,1|5,1|6,1|10,1|11,1:119.866:366.612,131.36:3.31696,3.31696:1.68215e-15,0.498435,0.501573	0/0:28:0.50064:9,9:8-9,8-9:15,8,0,5:8,3|9,12:3,1|5,1|6,1|7,1|8,1:177.338:326.675,113.385:0.472558,0.472558:4.96969e-19,0.499154,0.500847
+chr1	6626511	.	ACCCACCCACCC	.	.	.	END=6626522;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999187:3,3:3-3,3-3:13,19,0,0:3,13:NULL:223.009:366.612,131.36:0.0,0.0:4.387e-42,0.000474992,0.999529	0/0:51:1.00001:3,3:3-3,3-3:22,29,0,0:3,22:NULL:342.245:326.675,113.385:0.0,0.0:0.0,2.41659e-06,1.0
+chr1	6633217	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6633244;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.878848:15,15:13-16,13-16:17,19,0,12:13,2|15,12|16,3:5,3|6,4|9,1|10,1|14,3:359.766:366.612,131.36:0.751302,0.751302:1.4e-44,0.00210048,0.997905	0/0:51:1.0:14,14:14-14,14-14:26,16,0,9:14,26:5,1|6,1|7,2|8,2|9,1|10,1|13,1:333.577:326.675,113.385:0.0,0.0:5.2809e-28,3.76402e-07,1.0
+chr1	6635223	.	AGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6635246;RU=agga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.868967:12,12:9-12,9-12:8,29,0,12:12,8:4,3|6,2|7,2|8,1|9,3|10,1:399.905:366.612,131.36:0.727436,0.727436:0.0,0.0,1.0	0/0:50:1.0:6,6:6-6,6-6:22,23,0,5:6,22:3,2|4,1|5,2:338.493:326.675,113.385:0.0,0.0:0.0,1.79946e-06,1.0
+chr1	6637761	.	AAAACAAAACAAAAC	.	.	.	END=6637775;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:189.748:366.612,131.36:0.0,0.0:0.0,2.94786e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:19,9,0,2:3,19:2,1|3,1:177.292:326.675,113.385:0.0,0.0:0.0,4.63746e-06,0.999995
+chr1	6639022	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=6639049;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:54:0.99161:16,17:16-16,16-17:18,28,0,8:15,2|16,14|17,2:5,2|6,2|7,1|9,1|11,1|17,1:407.064:366.612,131.36:0.0,0.437216:2.0971e-39,2.13905e-10,1.0	0/0:77:0.981574:14,14:13-14,13-14:24,35,0,16:13,5|14,19:5,3|7,1|8,3|9,1|10,4|12,2|13,2:555.047:326.675,113.385:0.345543,0.345543:3.88947e-19,0.0184703,0.98157
+chr1	6650989	.	ACACACACACACACACAC	.	.	.	END=6651006;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:9,9:9-9,9-9:20,20,0,7:9,20:5,1|7,2|8,4:316.391:366.612,131.36:0.0990099,0.0990099:1.13195e-34,6.36215e-06,0.999994	0/0:38:0.999539:9,9:8-9,8-9:20,9,0,8:8,2|9,18:6,1|7,1|8,5|9,1:235.415:326.675,113.385:0.294378,0.294378:9.34017e-37,0.000476681,0.999523
+chr1	6652069	.	AATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	END=6652100;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.99999:7,9:7-7,7-9:21,13,0,2:7,15|8,2|9,4:5,1|8,1:250.151:366.612,131.36:0.0,0.45372:1.27709e-14,1.0,2.06024e-20	0/0:37:1.0:8,8:8-8,8-8:24,9,0,4:8,24:4,1|7,3:214.106:326.675,113.385:0.0,0.0:0.0,1.95385e-07,1.0
+chr1	6653054	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=6653073;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.00001:6,6:6-6,6-6:21,18,0,6:6,21:2,1|4,2|5,3:290.798:366.612,131.36:0.0,0.0:0.0,3.94884e-07,1.0	0/0:52:1.0:5,5:4-5,4-5:27,19,0,5:5,27:3,2|4,3:316.099:326.675,113.385:0.169767,0.169767:0.0,2.97714e-08,1.0
+chr1	6660614	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6660633;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999553:5,5:5-5,5-5:14,13,0,2:5,14:2,1|3,1:191.696:366.612,131.36:0.0,0.0:0.0,0.00022762,0.999774	0/0:29:0.999755:5,5:5-5,5-5:15,12,0,2:5,15:3,2:181.981:326.675,113.385:0.0,0.0:0.0,0.000150829,0.99985
+chr1	6661173	.	GTTTTGTTTTGTTTT	GTTTTGTTTTGTTTTGTTTT	.	.	END=6661187;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.995835:4,4:4-4,4-4:12,8,0,0:4,12:NULL:121.767:366.612,131.36:0.0,0.0:0.0,0.00236118,0.997647	0/0:32:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,2:183.986:326.675,113.385:0.0,0.0:0.0,3.33869e-06,1.0
+chr1	6662622	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6662661;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.997073:16,16:16-16,16-16:13,3,0,0:16,13:NULL:80.8523:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/2:42:0.286442:20,25:20-20,12-26:15,9,0,16:19,2|20,13:5,1|6,1|10,1|11,2|12,1|13,1|14,1|15,3|16,2|19,1|23,1|25,1:288.356:326.675,113.385:0.0,4.65993:6.93767e-25,5.20978e-13,1.0
+chr1	6663558	.	CTGCTGCTGCTG	.	.	.	END=6663569;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.577703:4,4:4-4,4-4:4,2,0,0:4,4:NULL:35.0695:366.612,131.36:0.0,0.0:2.88725e-11,0.234658,0.765367	0/0:63:1.0:4,4:4-4,4-4:34,27,0,2:4,34:3,2:402.862:326.675,113.385:0.0,0.0:0.0,3.71134e-10,1.0
+chr1	6664650	.	TATGTATGTATG	TATG	.	.	END=6664661;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:144.866:326.675,113.385:0.0,0.0:0.0,4.62343e-07,1.0
+chr1	6666335	.	TCCCTCCCTCCC	.	.	.	END=6666346;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:244.895:366.612,131.36:0.0,0.0:0.0,1.21091e-07,1.0	0/0:54:1.0:3,3:3-3,3-3:29,22,0,3:3,29:2,3:335.04:326.675,113.385:0.0,0.0:0.0,7.12479e-09,1.0
+chr1	6666349	.	TCTTTCTTTCTT	.	.	.	END=6666360;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00002:3,3:3-8,3-8:20,15,0,0:3,20:NULL:215.496:366.612,131.36:2.46433,2.46433:0.0,7.47024e-06,0.999994	0/0:51:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:300.283:326.675,113.385:0.0,0.0:0.0,1.5381e-09,1.0
+chr1	6666375	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6666390;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.996825:17,18:17-17,15-18:12,14,0,9:17,10|18,2:9,2|10,1|14,1|15,2|16,1|17,1|18,1:263.472:366.612,131.36:0.19802,0.8516:0.0,0.0,1.0	0/0:51:1.0:8,8:8-8,8-8:26,19,0,5:8,26:4,1|6,2|7,2:317.137:326.675,113.385:0.0,0.0:2.8061e-41,8.445e-08,1.0
+chr1	6671371	.	AAGAAAGAAAGAAAGA	.	.	.	END=6671386;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999854:4,4:3-4,3-4:16,13,0,0:4,16:NULL:181.48:366.612,131.36:0.236383,0.236383:0.0,0.00011318,0.999888	0/0:22:0.998983:4,4:4-4,4-4:14,8,0,0:4,14:NULL:134.801:326.675,113.385:0.0,0.0:2.455e-42,0.000664496,0.999339
+chr1	6673316	.	AAACAAACAAAC	.	.	.	END=6673327;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999999:3,3:3-3,3-3:19,6,0,0:3,19:NULL:126.548:366.612,131.36:0.0,0.0:0.0,9.74928e-06,0.999993	0/0:52:1.0:3,3:3-3,3-3:31,21,0,0:3,31:NULL:317.693:326.675,113.385:0.0,0.0:0.0,1.1136e-08,1.0
+chr1	6674435	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=6674462;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.316825:16,16:14-16,14-16:12,15,0,0:14,2|15,2|16,8:NULL:198.567:366.612,131.36:0.840244,0.840244:8.33851e-25,0.0022144,0.997791	0/0:54:0.993236:14,14:13-14,13-14:26,23,0,5:13,6|14,20:5,3|6,2:376.116:326.675,113.385:0.323567,0.323567:4.66391e-23,0.00678172,0.993234
+chr1	6680517	.	TGGGTGGGTGGG	.	.	.	END=6680528;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:189.462:366.612,131.36:0.0,0.0:0.0,3.00271e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:263.257:326.675,113.385:0.0,0.0:0.0,3.35788e-07,1.0
+chr1	6684271	.	ACAAACAAACAAACAA	.	.	.	END=6684286;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:228.612:366.612,131.36:0.0,0.0:0.0,5.85672e-06,0.999995	0/0:33:0.999992:4,4:4-4,4-4:18,9,0,6:4,18:3,6:196.145:326.675,113.385:0.0,0.0:0.0,1.14496e-05,0.999988
+chr1	6690576	.	TATATATATATA	.	.	.	END=6690587;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.975685:6,6:6-6,6-6:9,0,0,0:6,9:NULL:35.4976:366.612,131.36:0.0,0.0:3.9678e-15,0.0124883,0.987536	0/0:21:0.999204:6,6:6-6,6-6:14,7,0,0:6,14:NULL:125.106:326.675,113.385:0.0,0.0:7.2177e-23,0.000535469,0.999469
+chr1	6703494	.	TATATATATATATATATATATATATATA	TATATATATATATATATATATATATA	.	.	END=6703521;RU=ta;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.968492:13,13:13-13,13-13:9,9,0,3:13,9:8,1|10,1|13,1:146.856:366.612,131.36:0.139319,0.139319:0.982443,0.0175961,1.6944e-08	0/0:10:0.479794:14,14:14-14,14-14:4,6,0,0:14,4:NULL:71.5921:326.675,113.385:0.417958,0.417958:0.00029151,0.284597,0.715118
+chr1	6711923	.	CAAACAAACAAACAAA	.	.	.	END=6711938;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999782:4,4:4-4,4-4:15,22,0,2:4,15:2,1|3,1:285.144:366.612,131.36:0.0,0.0:2.09e-43,0.000166085,0.999835	0/0:36:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:181.384:326.675,113.385:0.0,0.0:0.0,3.89179e-08,1.0
+chr1	6713866	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6713917;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.221703:14,14:10-14,10-14:3,15,0,0:14,3:NULL:153.06:366.612,131.36:1.2177,1.2177:1.0,0.0,0.0	0/2:43:0.987703:26,27:21-26,21-28:13,15,0,12:25,2|26,9|27,2:5,1|6,1|13,2|14,1|15,1|21,1|23,3|24,1|27,1:300.289:326.675,113.385:0.973827,1.47541:6.51093e-19,1.9854e-05,0.99998
+chr1	6713993	.	TGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6714004;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.221145:6,6:3-6,3-6:2,13,0,0:6,2:NULL:129.107:366.612,131.36:0.991188,0.991188:6.73945e-05,0.532693,0.467348	0/1:62:0.284611:6,18:6-6,6-21:43,16,0,3:6,43:11,1|13,1|18,1:369.866:326.675,113.385:0.0,5.2541:0.0,5.92463e-21,1.0
+chr1	6716659	.	TTTCTTTCTTTC	.	.	.	END=6716670;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999993:3,3:3-3,3-3:18,20,0,2:3,18:2,2:265.082:366.612,131.36:0.0,0.0:0.0,1.79637e-05,0.999985	0/0:47:1.0:3,3:3-3,3-3:31,11,0,5:3,31:2,5:260.567:326.675,113.385:0.0,0.0:0.0,1.18079e-09,1.0
+chr1	6720277	.	ACATACATACAT	.	.	.	END=6720288;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:268.077:366.612,131.36:0.0,0.0:0.0,9.24506e-08,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.205:326.675,113.385:0.0,0.0:0.0,1.36787e-06,1.0
+chr1	6721062	.	CACACACACACA	.	.	.	END=6721073;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:19,12,0,6:6,19:4,1|5,5:235.048:366.612,131.36:0.0,0.0:8.662e-41,4.90018e-06,0.999995	0/0:34:0.999993:6,6:6-6,6-6:19,15,0,0:6,19:NULL:208.771:326.675,113.385:0.0,0.0:8.8628e-41,1.658e-05,0.999986
+chr1	6721105	.	TTTTGTTTTGTTTTG	.	.	.	END=6721119;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:198.723:366.612,131.36:0.0,0.0:0.0,1.695e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:32,6,0,3:3,32:2,3:204.171:326.675,113.385:0.0,0.0:0.0,5.65962e-10,1.0
+chr1	6722604	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=6722663;RU=ttttg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.998215:8,8:8-8,8-8:12,17,0,8:8,12:2,1|4,2|5,1|6,1|7,3:260.566:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:46:0.999287:12,12:12-12,12-12:13,15,0,18:12,13:3,1|4,2|5,4|6,1|7,1|8,3|9,2|11,4:320.81:326.675,113.385:0.0,0.0:1.50531e-38,0.000313811,0.999689
+chr1	6723584	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6723621;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:36:0.99981:19,23:19-23,23-24:7,16,0,11:19,3|23,4:4,1|6,1|13,3|15,1|17,2|18,1|22,2:268.49:366.612,131.36:1.01068,0.195027:2.2591e-26,0.000132187,0.999871	1/0:39:0.994947:18,19:18-20,19-19:14,11,0,13:18,4|19,10:6,1|8,1|9,2|10,2|14,2|15,2|16,2|18,1:273.883:326.675,113.385:0.540307,0.0:1.55211e-10,0.99495,0.0050625
+chr1	6728597	.	TTTCTTTCTTTC	.	.	.	END=6728608;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999538:3,3:3-3,3-3:14,9,0,0:3,14:NULL:133.683:366.612,131.36:0.0,0.0:0.0,0.000243385,0.999758	0/0:34:1.0:3,3:3-3,3-3:27,5,0,2:3,27:2,2:166.45:326.675,113.385:0.0,0.0:0.0,2.15002e-08,1.0
+chr1	6730348	.	TGGGTGGGTGGGTGGG	.	.	.	END=6730363;RU=tggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999531:4,4:4-4,4-4:15,27,0,0:4,15:NULL:301.947:366.612,131.36:0.0,0.0:0.0,0.000389541,0.999613	0/0:47:0.999845:4,4:4-4,4-4:16,29,0,2:4,16:3,2:341.888:326.675,113.385:0.0,0.0:0.0,0.000106812,0.999895
+chr1	6730422	.	TGCTTTGCTTTGCTT	.	.	.	END=6730436;RU=tgctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:33,20,0,0:3,33:NULL:310.714:366.612,131.36:0.0,0.0:0.0,7.62851e-10,1.0	0/0:69:1.0:3,3:3-3,3-3:54,10,0,5:3,54:2,5:341.071:326.675,113.385:0.0,0.0:0.0,1.7461e-16,1.0
+chr1	6734369	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=6734401;RU=ttg;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.980074:15,15:14-15,14-15:15,13,0,18:14,2|15,13:5,1|7,2|8,1|9,4|11,2|12,2|13,1|14,4|15,1:325.514:366.612,131.36:0.334882,0.334882:0.0,0.0,1.0	0/0:50:1.00001:11,11:11-11,11-11:20,16,0,14:11,20:3,1|4,1|5,2|6,2|7,2|8,1|9,2|10,3:341.701:326.675,113.385:0.0,0.0:3.28e-43,3.46465e-06,1.0
+chr1	6735467	.	AATCAATCAATC	.	.	.	END=6735478;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:3,3:2-3,2-3:20,8,0,0:3,20:NULL:153.232:366.612,131.36:0.36513,0.36513:0.0,3.69551e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:218.448:326.675,113.385:0.0,0.0:0.0,5.86043e-06,0.999995
+chr1	6736982	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6737025;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.609566:19,20:19-19,19-20:8,10,0,13:19,8:5,2|7,2|9,1|10,1|11,1|14,2|17,1|18,2|20,1:236.394:366.612,131.36:0.0,0.40582:0.75266,0.24735,4.34393e-15	0/0:43:0.903804:22,22:21-23,21-23:16,12,0,14:21,3|22,11|23,2:6,1|7,1|8,1|9,1|10,3|11,1|15,1|19,1|20,2|22,2:305.424:326.675,113.385:0.559734,0.559734:1.7949e-27,0.00514933,0.994866
+chr1	6740766	.	GTTTGTTTGTTTGTTT	.	.	.	END=6740781;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999991:4,4:4-4,4-4:19,15,0,2:4,19:3,2:228.062:366.612,131.36:0.0,0.0:0.0,1.52551e-05,0.999986	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:228.081:326.675,113.385:0.0,0.0:0.0,4.35477e-07,1.0
+chr1	6745472	.	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6745495;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.975726:6,6:5-6,5-6:19,23,0,9:5,2|6,17:2,2|3,2|4,1|5,4:362.099:366.612,131.36:0.419363,0.419363:0.0,0.0243312,0.975718	0/0:36:1.00001:6,6:3-6,3-6:21,8,0,6:6,21:2,1|3,1|4,2|5,2:198.513:326.675,113.385:0.934582,0.934582:0.0,1.88575e-06,1.0
+chr1	6748758	.	AAACAAACAAACAAAC	.	.	.	END=6748773;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,16,0,0:4,21:NULL:228.863:366.612,131.36:0.0,0.0:0.0,3.67721e-06,1.0	0/0:45:1.0:4,4:4-4,4-4:26,13,0,6:4,26:2,1|3,5:263.236:326.675,113.385:0.0,0.0:0.0,4.99948e-08,1.0
+chr1	6749336	.	GTTTGTTTGTTT	.	.	.	END=6749347;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.995381:3,3:3-3,3-3:11,10,0,0:3,11:NULL:133.595:366.612,131.36:0.0,0.0:6.29787e-37,0.00205199,0.997952	0/0:21:0.999856:3,3:3-3,3-3:16,5,0,0:3,16:NULL:109.32:326.675,113.385:0.0,0.0:0.0,6.8238e-05,0.999933
+chr1	6751150	.	AAAAGAAAAGAAAAG	AAAAG	.	.	END=6751164;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.108428:1,1:1-2,1-2:0,18,0,0:NULL:NULL:174.121:366.612,131.36:0.536301,0.536301:0.385972,0.49367,0.120449	0/0:35:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.154:326.675,113.385:0.0,0.0:0.0,9.84342e-06,0.999993
+chr1	6752073	.	TATCTATCTATC	.	.	.	END=6752084;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:2-3,2-3:30,27,0,2:3,30:2,2:374.491:366.612,131.36:0.236383,0.236383:0.0,5.52036e-09,1.0	0/0:41:1.0:3,3:3-3,3-3:27,12,0,2:3,27:2,2:228.917:326.675,113.385:0.0,0.0:0.0,2.1434e-08,1.0
+chr1	6752139	.	TTGTTGTTGTTG	.	.	.	END=6752150;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:32,23,0,0:4,32:NULL:334.176:366.612,131.36:0.0,0.0:0.0,4.61281e-09,1.0	0/0:39:1.00001:4,4:4-4,4-4:22,14,0,3:4,22:3,3:234.628:326.675,113.385:0.0,0.0:0.0,7.82498e-07,1.0
+chr1	6752213	.	AAACAAACAAAC	.	.	.	END=6752224;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:261.678:366.612,131.36:0.0,0.0:0.0,2.98266e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:27,11,0,2:3,27:2,2:222.519:326.675,113.385:0.0,0.0:0.0,2.70935e-08,1.0
+chr1	6754429	.	TTTGTTTTGTTTTGT	TTTGT	.	.	END=6754443;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0942719:1,1:1-3,1-3:0,14,0,0:NULL:NULL:133.774:366.612,131.36:0.8516,0.8516:0.236528,0.507018,0.256493	0/0:30:0.999998:3,3:3-3,3-3:18,9,0,3:3,18:2,3:174.936:326.675,113.385:0.0,0.0:0.0,9.15557e-06,0.999993
+chr1	6756494	.	TATATATATATATA	TATATATATATA	.	.	END=6756507;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.992278:6,6:6-7,6-7:11,7,0,0:6,11:NULL:106.224:366.612,131.36:0.382696,0.382696:0.996059,0.00394922,1.14248e-24	0/0:21:0.991242:7,7:7-7,7-7:11,10,0,0:7,11:NULL:132.924:326.675,113.385:0.0,0.0:1.14522e-19,0.00589292,0.994121
+chr1	6762157	.	CTTTCTTTCTTT	.	.	.	END=6762168;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.99973:3,3:3-3,3-3:15,6,0,0:3,15:NULL:115.032:366.612,131.36:0.0,0.0:0.0,0.000133363,0.999871	0/0:14:0.979383:3,3:3-3,3-3:9,5,0,0:3,9:NULL:84.5507:326.675,113.385:0.0,0.0:2.28729e-30,0.010148,0.989873
+chr1	6765667	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6765686;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:5,5:5-5,5-5:20,6,0,4:5,20:3,1|4,3:164.803:366.612,131.36:0.0,0.0:0.0,3.0411e-06,1.0	0/0:41:1.0:5,5:5-5,5-5:25,14,0,2:5,25:3,2:246.049:326.675,113.385:0.0,0.0:0.0,1.92216e-07,1.0
+chr1	6766469	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6766494;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.8163:20,20:18-23,18-23:7,16,0,8:20,7:8,1|10,1|13,2|14,1|16,1|18,1|19,1:243.529:366.612,131.36:1.7276,1.7276:0.0,0.0,1.0	0/0:44:0.997988:13,13:13-13,13-13:18,15,0,11:12,2|13,16:4,1|5,1|6,1|9,3|10,2|11,2|12,1:301.827:326.675,113.385:0.139319,0.139319:3.51002e-17,0.00196364,0.998042
+chr1	6766823	.	AAAAGAAAAGAAAAG	.	.	.	END=6766837;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999829:3,3:3-3,3-3:16,10,0,0:3,16:NULL:159.17:366.612,131.36:0.0,0.0:0.0,0.000110301,0.999894	0/0:28:0.999828:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.407:326.675,113.385:0.0,0.0:0.0,0.000120073,0.99988
+chr1	6772439	.	GGGTGGGTGGGT	.	.	.	END=6772450;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.568148:3,3:2-3,2-3:4,25,0,2:3,4:2,2:265.765:366.612,131.36:0.195027,0.195027:2.67462e-12,0.259457,0.740549	0/0:30:0.999152:3,3:3-3,3-3:14,16,0,0:3,14:NULL:197.744:326.675,113.385:0.0,0.0:7.51e-43,0.000631579,0.99937
+chr1	6777440	.	AAGAAGAAGAAG	.	.	.	END=6777451;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:24,10,0,0:4,24:NULL:188.867:366.612,131.36:0.0,0.0:0.0,4.41209e-07,1.0	0/0:38:1.0:4,4:4-4,4-4:25,11,0,2:4,25:3,2:210.852:326.675,113.385:0.0,0.0:0.0,1.09758e-07,1.0
+chr1	6782984	.	AAGAAGAAGAAG	.	.	.	END=6782995;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-5,4-5:25,11,0,0:4,25:NULL:198.879:366.612,131.36:0.311527,0.311527:0.0,3.56499e-07,1.0	0/0:44:1.0:4,4:3-4,3-4:24,19,0,0:4,24:NULL:268.718:326.675,113.385:0.270063,0.270063:0.0,6.42206e-07,1.0
+chr1	6784915	.	ACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6784950;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.538962:26,26:26-26,26-26:4,17,0,15:26,4:7,1|8,1|9,2|11,2|13,2|15,2|16,1|20,2|22,1|23,1:298.207:366.612,131.36:0.0990099,0.0990099:0.0,0.0,1.0	0/0:45:0.971275:18,18:16-18,16-18:10,21,0,12:18,10:5,1|7,2|9,1|10,2|11,1|12,1|14,2|15,2:331.534:326.675,113.385:0.480581,0.480581:1.27448e-12,0.0139845,0.986045
+chr1	6785690	.	TAAATAAATAAA	.	.	.	END=6785701;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,17,0,0:3,37:NULL:297.244:366.612,131.36:0.0,0.0:0.0,3.93083e-11,1.0	0/0:61:1.0:3,3:3-3,3-3:38,23,0,0:3,38:NULL:354.587:326.675,113.385:0.0,0.0:0.0,2.68286e-11,1.0
+chr1	6788409	.	TTTGTTTGTTTG	.	.	.	END=6788420;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:21,31,0,0:3,21:NULL:365.753:366.612,131.36:0.0,0.0:0.0,4.74914e-06,0.999995	0/0:47:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:259.589:326.675,113.385:0.0,0.0:0.0,7.9757e-10,1.0
+chr1	6790829	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6790884;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.100914:21,21:16-23,16-23:2,19,0,5:21,2:7,2|10,1|11,1|20,1:227.266:366.612,131.36:2.87013,2.87013:1.0,0.0,0.0	0/2:28:0.784671:28,29:28-29,28-29:6,13,0,9:28,4|29,2:5,1|6,1|7,1|13,1|14,1|15,1|16,1|24,1|25,1:230.192:326.675,113.385:0.253975,0.44763:8.85426e-07,0.0276042,0.972453
+chr1	6790889	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6790928;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.695649:14,15:14-16,15-16:9,21,0,4:14,3|15,6:11,2|12,1|14,1:268.723:366.612,131.36:0.637827,0.169767:1.0,0.0,0.0	0/0:33:0.98747:20,20:20-21,20-21:11,13,0,7:20,11:6,1|9,1|10,2|12,1|13,1|18,1:228.719:326.675,113.385:0.294378,0.294378:1.13944e-13,0.00558371,0.994429
+chr1	6798413	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=6798460;RU=gata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.649047:15,15:10-15,10-15:4,13,0,12:15,4:4,1|5,1|8,1|12,2|13,2|14,5:230.461:366.612,131.36:1.99337,1.99337:0.0,0.00268667,0.997321	0/0:32:0.992273:12,12:12-12,12-12:10,13,0,9:12,10:2,1|4,1|5,1|6,1|8,1|9,1|11,3:229.25:326.675,113.385:0.0,0.0:2.29615e-23,0.00432192,0.995689
+chr1	6801379	.	ACAAGACAAGACAAG	.	.	.	END=6801393;RU=acaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999695:3,3:3-3,3-3:14,10,0,0:3,14:NULL:150.4:366.612,131.36:0.0,0.0:0.0,0.00020878,0.999795	0/0:52:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:318.985:326.675,113.385:0.0,0.0:0.0,8.73404e-09,1.0
+chr1	6802048	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6802089;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.993973:15,15:15-15,15-15:12,19,0,8:15,12:5,1|6,1|8,1|9,1|10,1|12,1|14,2:285.784:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:43:0.961253:21,21:18-29,18-29:15,13,0,13:20,3|21,12:5,1|6,1|8,1|10,1|13,3|15,1|16,1|18,1|19,2|20,1:297.166:326.675,113.385:4.22868,4.22868:1.29016e-12,0.0378589,0.962208
+chr1	6804083	.	TGCTGCTGCTGCTGC	.	.	.	END=6804097;RU=tgc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999993:5,5:5-5,5-5:20,14,0,0:5,20:NULL:206.277:366.612,131.36:0.0,0.0:0.0,1.2538e-05,0.999987	0/0:39:1.0:5,5:5-5,5-5:29,10,0,0:5,29:NULL:204.217:326.675,113.385:0.0,0.0:0.0,1.42854e-08,1.0
+chr1	6806447	.	CATGCATGCATG	.	.	.	END=6806458;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:3,3:3-3,3-3:34,27,0,0:3,34:NULL:373.021:366.612,131.36:0.0,0.0:0.0,5.00038e-10,1.0	0/0:49:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:287.628:326.675,113.385:0.0,0.0:0.0,5.02911e-09,1.0
+chr1	6812486	.	AGCAAGCAAGCA	.	.	.	END=6812497;RU=agca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.99993:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.095:366.612,131.36:0.0,0.0:0.0,4.03126e-05,0.999963	0/0:30:0.999946:3,3:3-3,3-3:17,13,0,0:3,17:NULL:190.203:326.675,113.385:0.0,0.0:0.0,5.80473e-05,0.999942
+chr1	6829363	.	ACCCACCCACCC	.	.	.	END=6829374;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.916632:3,3:3-3,3-3:7,18,0,0:3,7:NULL:192.672:366.612,131.36:0.0,0.0:5.55052e-22,0.0621172,0.937973	0/0:43:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:284.469:326.675,113.385:0.0,0.0:0.0,4.73609e-06,0.999995
+chr1	6830436	.	ACACACACACAC	.	.	.	END=6830447;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999811:6,6:5-7,5-7:27,9,0,4:5,2|6,25:4,1|5,3:229.185:366.612,131.36:0.374933,0.374933:0.0,0.000191561,0.999811	0/0:37:0.998197:6,6:5-6,5-6:23,10,0,4:5,2|6,21:4,2|5,2:221.385:326.675,113.385:0.36513,0.36513:4.3e-44,0.00180941,0.998194
+chr1	6830470	.	GGAGGGAGGGAG	.	.	.	END=6830481;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,8,0,2:3,26:2,2:189.305:366.612,131.36:0.0,0.0:0.0,8.93492e-08,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:186.791:326.675,113.385:0.0,0.0:0.0,1.12599e-06,1.0
+chr1	6831326	.	AAGCAAGCAAGC	.	.	.	END=6831337;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.994923:3,3:3-3,3-3:11,23,0,0:3,11:NULL:260.069:366.612,131.36:0.0,0.0:6.69228e-35,0.0030612,0.99695	0/0:25:0.999973:3,3:3-3,3-3:18,7,0,0:3,18:NULL:136.979:326.675,113.385:0.0,0.0:0.0,2.05381e-05,0.99998
+chr1	6832131	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6832174;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:40:0.323942:22,39:22-22,22-40:13,13,0,13:21,4|22,9:5,1|9,1|10,2|12,1|17,2|18,1|20,2|22,1|25,1|39,1:295.33:366.612,131.36:0.0990099,7.11791:1.85089e-26,5.46776e-09,1.0	0/0:41:0.818535:22,22:22-23,22-23:15,12,0,14:21,2|22,11|23,2:4,1|5,1|6,1|9,1|10,1|11,1|12,1|13,1|15,3|16,1|18,1|20,1:293.524:326.675,113.385:0.469228,0.469228:1.8178e-13,0.00523002,0.994783
+chr1	6834875	.	CTTCTTCTTCTTCTT	.	.	.	END=6834889;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998465:5,5:4-5,4-5:14,15,0,0:5,14:NULL:196.131:366.612,131.36:0.36513,0.36513:5.05e-42,0.00124333,0.998762	0/0:41:1.0:5,5:5-5,5-5:24,17,0,0:5,24:NULL:253.329:326.675,113.385:0.0,0.0:0.0,8.6663e-07,1.0
+chr1	6842625	.	ATGGATGGATGG	.	.	.	END=6842636;RU=atgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:30,20,0,0:3,30:NULL:299.761:366.612,131.36:0.0,0.0:0.0,5.34059e-09,1.0	0/0:46:1.0:3,3:3-3,3-3:27,16,0,3:3,27:2,3:272.712:326.675,113.385:0.0,0.0:0.0,2.1608e-08,1.0
+chr1	6845815	.	TGTTGTTGTTGT	.	.	.	END=6845826;RU=tgt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:21,12,0,2:4,21:3,2:209.619:366.612,131.36:0.0,0.0:0.0,2.37087e-06,1.0	0/0:22:0.999669:4,4:4-4,4-4:15,7,0,0:4,15:NULL:125.168:326.675,113.385:0.0,0.0:0.0,0.00017801,0.999826
+chr1	6852419	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA,AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6852478;RU=agga;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:56:0.991325:15,17:5-15,5-17:6,30,0,18:15,4|17,2:3,1|5,1|6,1|7,1|8,1|9,4|10,2|11,2|12,1|14,2|15,1|16,1:437.994:366.612,131.36:4.50067,5.02301:2.62865e-23,2.88987e-06,1.0	0/1:44:0.879306:15,16:15-15,15-16:12,20,0,12:15,9|16,3:3,1|5,1|6,1|7,1|9,2|11,2|12,2|13,1|15,1:332.587:326.675,113.385:0.0,0.484441:2.61894e-23,0.000296602,0.999705
+chr1	6852486	.	AGGCAGGCAGGC	.	.	.	END=6852497;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:25,28,0,0:3,25:NULL:350.825:366.612,131.36:0.0,0.0:0.0,3.01088e-07,1.0	0/0:43:1.0:3,3:3-3,3-3:31,12,0,0:3,31:NULL:228.067:326.675,113.385:0.0,0.0:0.0,2.71519e-09,1.0
+chr1	6855646	.	CAGCAGCAGCAGCAG	.	.	.	END=6855660;RU=cag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:28,15,0,0:5,28:NULL:240.107:366.612,131.36:0.0,0.0:0.0,3.39882e-08,1.0	0/0:35:1.0:5,5:5-5,5-5:24,11,0,0:5,24:NULL:195.661:326.675,113.385:0.0,0.0:0.0,4.6101e-07,1.0
+chr1	6856365	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6856396;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.168138:31,31:22-31,22-31:2,6,0,9:31,2:5,1|7,1|8,1|13,1|15,1|17,1|23,1|28,1|30,1:139.102:366.612,131.36:4.26,4.26:0.0,0.0,1.0	0/0:29:0.999082:16,16:16-16,16-16:20,5,0,4:15,3|16,17:5,1|10,1|11,1|15,1:165.745:326.675,113.385:0.0,0.0:2.09772e-20,0.000841373,0.999164
+chr1	6858278	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6858317;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:49:0.293981:17,27:17-17,16-29:13,16,0,19:16,4|17,9:5,2|6,1|8,3|9,1|10,3|11,1|12,2|13,1|15,3|16,1|26,1:375.164:366.612,131.36:0.139319,5.28021:0.000461757,0.999538,1.06857e-27	0/3:48:0.330157:20,36:20-20,19-36:20,12,0,16:19,5|20,13|21,2:4,1|5,1|8,1|9,2|11,1|12,2|14,1|15,1|16,3|17,1|18,1|36,1:357.236:326.675,113.385:0.0990099,8.00505:3.23109e-15,0.00236699,0.99764
+chr1	6862315	.	AAAATAAAATAAAAT	.	.	.	END=6862329;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999771:3,3:3-3,3-3:16,13,0,0:3,16:NULL:184.204:366.612,131.36:0.0,0.0:0.0,0.000148907,0.99985	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:238.178:326.675,113.385:0.0,0.0:0.0,2.03729e-07,1.0
+chr1	6864440	.	TTTGTTTGTTTG	.	.	.	END=6864451;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.9999:3,3:3-3,3-3:16,18,0,0:3,16:NULL:224.335:366.612,131.36:0.0,0.0:0.0,7.11331e-05,0.999932	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:161.012:326.675,113.385:0.0,0.0:0.0,2.86971e-07,1.0
+chr1	6865995	.	AAAGAAAAGAAAAGA	AAAGAAAAGA	.	.	END=6866009;RU=aaaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.999474:2,2:2-2,2-2:14,22,0,0:2,14:NULL:281.364:366.612,131.36:0.0,0.0:0.999782,0.000218486,1.0213e-41	0/0:28:0.997123:3,3:3-3,3-3:11,14,0,3:3,11:2,3:191.584:326.675,113.385:0.0,0.0:2.80918e-35,0.00147673,0.998527
+chr1	6868261	.	GTTTGTTTGTTT	.	.	.	END=6868272;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.99998:3,3:3-3,3-3:18,12,0,0:3,18:NULL:182.169:366.612,131.36:0.0,0.0:0.0,1.59765e-05,0.999986	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:254.657:326.675,113.385:0.0,0.0:0.0,6.79809e-08,1.0
+chr1	6869420	.	ATGTAGATGTAGATGTAGATGTAG	ATGTAGATGTAGATGTAG	.	.	END=6869443;RU=atgtag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:1.0:3,3:3-3,3-3:30,15,0,2:3,30:2,2:271.461:366.612,131.36:0.0,0.0:1.0,2.36335e-09,0.0	0/0:38:1.0:4,4:4-4,4-4:28,8,0,2:4,28:3,2:201.403:326.675,113.385:0.0,0.0:0.0,1.7602e-08,1.0
+chr1	6870752	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6870787;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:49:0.681137:25,25:24-26,24-26:5,22,0,20:25,5:4,2|8,1|9,2|11,2|14,1|15,1|16,1|19,2|20,3|22,1|23,3|24,1:385.769:366.612,131.36:0.597515,0.597515:0.0,0.0,1.0	0/1:38:0.986942:18,19:17-18,17-19:14,13,0,11:17,3|18,9|19,2:4,1|6,1|7,1|10,1|12,1|13,1|15,2|16,1|17,1|19,1:282.411:326.675,113.385:0.169767,0.61895:5.50292e-17,0.000124617,0.999879
+chr1	6872012	.	TTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTG	.	.	END=6872031;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:26:0.984722:3,4:3-4,4-4:12,14,0,0:3,2|4,10:NULL:189.039:366.612,131.36:0.478946,0.0:4.49923e-26,0.984772,0.0152629	0/0:27:0.999866:4,4:4-4,4-4:16,8,0,3:4,16:2,1|3,2:156.875:326.675,113.385:0.0,0.0:0.0,6.58613e-05,0.999934
+chr1	6872093	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6872104;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.942844:18,19:18-19,19-19:9,13,0,8:18,2|19,7:6,2|9,1|14,1|15,1|17,2|18,1:229.936:366.612,131.36:0.489073,0.0:0.0,0.0,1.0	0/0:22:0.99991:6,6:6-6,6-6:17,5,0,0:6,17:NULL:110.788:326.675,113.385:0.0,0.0:2.43651e-29,5.65674e-05,0.999947
+chr1	6872191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6872254;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.835472:14,14:12-14,12-14:7,6,0,0:14,7:NULL:84.8398:366.612,131.36:0.803751,0.803751:1.0,0.0,0.0	2/3:26:0.0451539:29,34:16-32,16-34:0,13,0,10:NULL:5,1|8,1|13,1|16,1|20,1|26,1|27,1|29,2|34,1:195.557:326.675,113.385:7.01576,8.73288:5.43447e-08,0.643162,0.35688
+chr1	6876058	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC	.	.	END=6876085;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:0.985613:18,18:16-18,16-18:17,21,0,14:16,2|18,15:6,1|7,3|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,1:392.646:366.612,131.36:0.673267,0.673267:0.0,6.87905e-06,0.999994	0/0:35:0.999752:14,14:14-17,14-17:17,5,0,9:14,17:5,2|8,2|9,1|11,1|12,1|13,1|14,1:190.632:326.675,113.385:0.924033,0.924033:3.31908e-30,2.98706e-05,0.999971
+chr1	6876396	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=6876439;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:8,8:8-8,8-8:27,15,0,9:8,27:4,2|5,1|7,6:316.024:366.612,131.36:0.0,0.0:1.0,1.22712e-08,0.0	0/0:35:0.995289:11,11:10-11,10-11:11,15,0,8:11,11:3,1|4,1|5,2|6,1|7,1|8,1|9,1:246.682:326.675,113.385:0.323567,0.323567:2.91614e-28,0.00364165,0.996368
+chr1	6876754	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6876787;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.57464:20,20:17-20,17-20:8,15,0,4:19,2|20,6:6,1|14,3:218.122:366.612,131.36:1.04876,1.04876:2.22301e-25,0.0277766,0.972279	0/0:45:0.953393:17,17:17-18,17-18:15,15,0,15:17,13|18,2:4,2|7,2|9,1|11,1|12,4|13,1|14,2|15,1|16,1:330.521:326.675,113.385:0.298675,0.298675:9.93793e-16,0.00036573,0.999636
+chr1	6877580	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6877621;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.982039:16,16:16-16,16-16:11,21,0,9:16,11:6,2|8,1|9,2|10,2|15,2:310.378:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/2:22:0.299487:21,25:21-21,21-27:7,5,0,10:21,7:6,1|7,1|8,2|9,1|10,1|12,1|14,1|16,1|25,1:164.464:326.675,113.385:0.0,2.20972:3.99637e-15,1.38343e-07,1.0
+chr1	6877626	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6877675;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.921099:25,25:23-26,23-26:9,18,0,5:25,9:5,1|6,1|10,1|11,1|14,1:248.263:366.612,131.36:0.694906,0.694906:7.95104e-13,0.0391718,0.960897	1/1:20:0.124742:24,24:17-25,17-25:2,6,0,9:24,2:6,1|9,1|11,2|15,1|16,2|17,2:136.348:326.675,113.385:3.45807,3.45807:0.699534,0.284439,0.016058
+chr1	6881104	.	ATATATATATAT	ATATATATATATAT	.	.	END=6881115;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999432:7,7:6-8,6-8:23,12,0,0:6,2|7,19|8,2:NULL:218.603:366.612,131.36:0.263076,0.263076:0.0,2.27564e-06,1.0	0/0:31:1.00001:6,6:6-6,6-6:21,9,0,0:6,21:NULL:171.527:326.675,113.385:0.0,0.0:4.71048e-28,4.14109e-06,0.999995
+chr1	6881253	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6881268;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.0:7,7:7-7,7-7:32,21,0,2:7,32:4,1|5,1:332.74:366.612,131.36:0.0,0.0:1.0,1.53291e-09,0.0	0/2:35:0.296309:8,13:8-8,8-14:19,12,0,4:8,19:4,1|5,1|7,1|13,1:230.348:326.675,113.385:0.0,2.59293:3.54084e-40,9.23434e-08,1.0
+chr1	6882309	.	TTGTTGTTGTTG	.	.	.	END=6882320;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:21,18,0,0:4,21:NULL:252.298:366.612,131.36:0.0,0.0:0.0,6.90775e-06,0.999994	0/0:28:0.999986:4,4:4-4,4-4:19,9,0,0:4,19:NULL:159.511:326.675,113.385:0.0,0.0:0.0,1.9165e-05,0.99998
+chr1	6884104	.	CAACAACAACAACAA	.	.	.	END=6884118;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:5,5:5-5,5-5:29,25,0,5:5,29:3,2|4,3:394.96:366.612,131.36:0.0,0.0:0.0,7.48635e-09,1.0	0/0:33:1.00001:5,5:5-5,5-5:21,10,0,2:5,21:4,2:192.446:326.675,113.385:0.0,0.0:0.0,3.0523e-06,1.0
+chr1	6886094	.	AAAACAAAACAAAAC	.	.	.	END=6886108;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:239.002:366.612,131.36:0.0,0.0:0.0,2.78941e-07,1.0	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:152.486:326.675,113.385:0.0,0.0:0.0,6.3523e-06,0.999994
+chr1	6888655	.	GCCAGCCAGCCA	.	.	.	END=6888666;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:237.094:366.612,131.36:0.0,0.0:0.0,2.2127e-08,1.0	0/0:32:1.0:3,3:3-3,3-3:23,7,0,2:3,23:2,2:168.016:326.675,113.385:0.0,0.0:0.0,4.24213e-07,1.0
+chr1	6891722	.	AGGGAGGGAGGGAGGG	.	.	.	END=6891737;RU=aggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999993:4,4:4-4,4-4:19,20,0,0:4,19:NULL:256.994:366.612,131.36:0.0,0.0:0.0,1.69107e-05,0.999986	0/0:35:0.999888:4,4:3-4,3-4:16,18,0,0:4,16:NULL:228.159:326.675,113.385:0.21692,0.21692:1.29816e-39,0.000103964,0.999896
+chr1	6891738	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6891777;RU=ga;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.0539607:8,40:1-34,30-40:0,26,0,9:NULL:8,2|23,1|27,1|28,2|30,1|36,1|38,1:320.108:366.612,131.36:8.48812,2.77655:0.0,0.861394,0.138693	0/0:36:0.525647:20,20:18-20,18-20:9,18,0,8:19,3|20,6:5,1|6,1|8,1|14,3|18,1|20,1:277.976:326.675,113.385:0.66122,0.66122:2.49917e-14,0.468764,0.531344
+chr1	6897317	.	TATATATATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=6897366;RU=ta;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00329521:1,1:1-4,1-4:0,6,0,0:NULL:NULL:52.7677:366.612,131.36:0.947603,0.947603:0.508489,0.44558,0.046024	2/2:9:0.110435:24,24:19-26,19-26:2,4,0,0:24,2:NULL:48.8495:326.675,113.385:2.84784,2.84784:0.636096,0.33096,0.0330274
+chr1	6901344	.	TATTATTATTAT	.	.	.	END=6901355;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:34,19,0,2:4,34:3,2:320.056:366.612,131.36:0.0,0.0:0.0,3.95915e-10,1.0	0/0:21:0.999632:4,4:4-4,4-4:15,6,0,0:4,15:NULL:114.575:326.675,113.385:0.0,0.0:3.2e-44,0.000213797,0.999788
+chr1	6901756	.	TTGGTTGGTTGG	.	.	.	END=6901767;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:300.394:366.612,131.36:0.0,0.0:0.0,4.12473e-06,0.999995	0/0:26:0.999895:3,3:3-3,3-3:16,6,0,4:3,16:2,4:150.512:326.675,113.385:0.0,0.0:0.0,3.60843e-05,0.999964
+chr1	6905302	.	ACCACCACCACC	.	.	.	END=6905313;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:32,12,0,0:4,32:NULL:235.669:366.612,131.36:0.0,0.0:0.0,1.35117e-09,1.0	0/0:19:0.995309:4,4:4-4,4-4:11,8,0,0:4,11:NULL:114.625:326.675,113.385:0.0,0.0:1.1877e-37,0.00296103,0.997048
+chr1	6908211	.	CCCTCCCTCCCT	.	.	.	END=6908222;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:28,17,0,0:3,28:NULL:271.107:366.612,131.36:0.0,0.0:0.0,2.38284e-08,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.755:326.675,113.385:0.0,0.0:0.0,2.04981e-06,1.0
+chr1	6910139	.	AAACAAACAAACAAACAAAC	.	.	.	END=6910158;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:5,5:5-5,5-5:26,16,0,5:5,26:3,2|4,3:284.722:366.612,131.36:0.0,0.0:0.0,3.30433e-08,1.0	0/0:29:0.998254:5,5:5-5,5-5:13,14,0,2:5,13:2,1|4,1:194.432:326.675,113.385:0.0,0.0:2e-44,0.00126943,0.998733
+chr1	6911240	.	CCCACCCCACCCCAC	.	.	.	END=6911254;RU=cccac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999009:3,3:3-3,3-3:14,22,0,0:3,14:NULL:263.812:366.612,131.36:0.19802,0.19802:1.35e-43,0.000773966,0.999227	0/0:24:0.945509:3,3:3-3,3-3:8,16,0,0:3,8:NULL:177.178:326.675,113.385:0.19802,0.19802:1.03576e-24,0.0401747,0.959892
+chr1	6925140	.	TTTGTTTGTTTGTTTG	.	.	.	END=6925155;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:21,14,0,4:4,21:2,2|3,2:245.162:366.612,131.36:0.0,0.0:0.0,3.32111e-06,1.0	0/0:35:1.0:4,4:4-4,4-4:20,13,0,2:4,20:2,1|3,1:211.672:326.675,113.385:0.0,0.0:0.0,6.06461e-06,0.999994
+chr1	6930503	.	TGTTTTTTTGTTTTTTTGTTTTTT	.	.	.	END=6930526;RU=tgtttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.996973:3,3:1-3,1-3:12,10,0,0:3,12:NULL:142.16:366.612,131.36:0.922441,0.922441:1.80829e-40,0.00235837,0.997648	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:171.573:326.675,113.385:0.0,0.0:0.0,2.04177e-06,1.0
+chr1	6933915	.	GAGGGGAGGAGGGGAGGAGGGGAGGAGGGGAG	GAGGGGAGGAGGGGAG	.	.	END=6933946;RU=gaggggag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.999974:2,2:2-2,2-2:18,10,0,0:2,18:NULL:163.717:366.612,131.36:0.0,0.0:0.999986,1.75747e-05,0.0	0/0:8:0.353389:4,4:1-4,1-4:3,5,0,0:4,3:NULL:60.2262:326.675,113.385:0.782116,0.782116:2.05313e-08,0.459316,0.540791
+chr1	6935598	.	TACATACATACA	.	.	.	END=6935609;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:24,3,0,3:3,24:2,3:140.786:366.612,131.36:0.0,0.0:0.0,1.42977e-07,1.0	0/0:26:0.999555:3,3:3-3,3-3:14,8,0,4:3,14:2,4:155.577:326.675,113.385:0.0,0.0:0.0,0.000136997,0.999865
+chr1	6935929	.	TAATTAATTAAT	.	.	.	END=6935940;RU=taat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:24,18,0,3:3,24:2,3:274.258:366.612,131.36:0.0,0.0:0.0,1.95933e-07,1.0	0/0:20:0.997324:3,3:3-3,3-3:12,8,0,0:3,12:NULL:115.153:326.675,113.385:0.0,0.0:6.01711e-39,0.00141431,0.998588
+chr1	6938052	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6938097;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:56:0.340107:15,23:15-15,15-24:26,22,0,7:15,26:4,1|9,1|10,1|14,2|16,1|22,1:386.612:366.612,131.36:0.0,3.7378:0.269567,0.730435,0.0	0/2:58:0.361021:23,29:23-23,20-31:15,17,0,23:22,2|23,13:5,1|6,1|7,1|8,1|11,2|12,2|13,3|14,1|16,2|17,1|18,2|19,1|20,1|21,2|22,1|29,1:436.004:326.675,113.385:0.0,3.32414:1.20159e-17,2.01133e-05,0.99998
+chr1	6938544	.	ATACATACATACATAC	.	.	.	END=6938559;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:81:1.0:4,4:4-4,4-4:48,27,0,6:4,48:3,6:480.317:366.612,131.36:0.0,0.0:0.0,1.37533e-14,1.0	0/0:65:1.0:4,4:4-4,4-4:39,21,0,5:4,39:2,1|3,4:381.92:326.675,113.385:0.0,0.0:0.0,7.22622e-12,1.0
+chr1	6938593	.	CACACACACACACACACA	CACACACACACACACACACA,CACACACACACACACACACACA	.	.	END=6938610;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:42:0.969887:9,11:9-10,9-11:8,27,0,7:9,3|10,2|11,3:5,1|6,1|8,4|9,1:349.387:366.612,131.36:0.425627,0.513899:5.37484e-21,1.1268e-05,0.999993	0/1:64:0.961031:9,10:9-9,9-10:30,23,0,10:9,28|10,2:4,2|5,1|8,6|10,1:428.184:326.675,113.385:0.0,0.498798:7.6e-44,2.5635e-10,1.0
+chr1	6938918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6938965;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:76:0.560131:25,25:24-27,24-27:15,32,0,28:24,5|25,8|26,2:8,2|9,2|10,2|11,3|12,4|13,1|14,1|15,1|16,2|17,3|19,2|22,1|23,2|24,1|25,1:605.849:366.612,131.36:0.837322,0.837322:1.36305e-31,8.65444e-05,0.999917	0/2:64:0.403396:24,29:24-24,24-29:18,24,0,20:23,5|24,13:5,3|6,1|7,1|8,1|9,1|10,1|11,1|13,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|28,1|29,1:487.422:326.675,113.385:0.0,1.35271:1.02382e-27,1.19979e-11,1.0
+chr1	6945641	.	TGTGAGTGTGAGTGTGAG	TGTGAGTGTGAGTGTGAGTGTGAGTGTGAG	.	.	END=6945658;RU=tgtgag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:35:1.0:3,5:3-3,5-5:21,14,0,0:3,14|5,7:NULL:226.503:366.612,131.36:0.0,0.0:0.0,3.70882e-29,1.0	0/0:54:1.0:3,3:3-3,3-3:29,21,0,4:3,29:2,3|3,1:332.918:326.675,113.385:0.0,0.0:0.0,8.39224e-09,1.0
+chr1	6945661	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6945680;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.284109:16,33:16-16,15-34:20,14,0,9:15,5|16,13|18,2:5,1|8,2|11,1|12,2|16,1|29,1|32,1:327.387:366.612,131.36:0.0990099,8.11798:0.0,0.0,1.0	0/0:62:1.0:10,10:10-10,10-10:39,17,0,6:9,3|10,36:5,1|6,1|7,1|8,1|9,2:371.987:326.675,113.385:0.0990099,0.0990099:0.0,2.72637e-08,1.0
+chr1	6954438	.	TATATATATATATATATA	TATATATATATATATATATA	.	.	END=6954455;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.803913:10,10:10-11,10-11:6,5,0,0:10,6:NULL:69.3638:366.612,131.36:0.465241,0.465241:6.04208e-12,0.0552173,0.944865	0/0:22:0.999478:9,9:9-9,9-9:15,7,0,0:9,15:NULL:128.249:326.675,113.385:0.0,0.0:2.06945e-18,0.000350763,0.999652
+chr1	6956316	.	ATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=6956347;RU=attt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.816834:7,7:6-7,6-7:6,9,0,3:7,6:3,1|5,1|6,1:131.956:366.612,131.36:0.481803,0.481803:0.925084,0.0750118,2.38259e-10	0/0:26:0.999661:8,8:8-8,8-8:15,5,0,6:8,15:3,2|5,2|6,2:152.494:326.675,113.385:0.0,0.0:6.12333e-34,0.000170439,0.999833
+chr1	6957040	.	ATCATCATCATC	.	.	.	END=6957051;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999894:4,4:4-4,4-4:16,14,0,2:4,16:3,2:206.579:366.612,131.36:0.0,0.0:1.47e-43,7.23921e-05,0.999932	0/0:36:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:182.817:326.675,113.385:0.0,0.0:0.0,3.3155e-08,1.0
+chr1	6958768	.	GTGTGTGTGTGT	GTGTGT,GTGTGTGTGTGTGTGTGT	.	.	END=6958779;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:0.425553:3,6:3-13,6-13:17,14,0,4:3,11|6,6:4,1|5,1|9,1|11,1:275.27:366.612,131.36:2.75429,2.87398:6.8036e-10,1.0,4.1744e-19	0/2:29:0.293816:6,9:6-6,6-10:10,17,0,2:6,10:6,1|8,1:213.017:326.675,113.385:0.0,1.39551:5.11656e-28,6.98227e-08,1.0
+chr1	6958877	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6958916;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:53:0.288595:17,27:17-17,16-27:20,18,0,15:16,4|17,14|18,2:4,1|5,1|6,1|7,1|8,1|13,2|14,4|15,2|16,1|24,1:394.452:366.612,131.36:0.0,4.77915:0.0548475,0.945238,1.754e-42	0/3:44:0.318887:20,35:20-20,20-35:15,11,0,15:20,15:5,1|7,3|9,2|12,1|13,2|17,1|18,2|19,1|35,2:299.43:326.675,113.385:0.0,6.05764:5.30546e-27,3.70236e-14,1.0
+chr1	6961641	.	AAGAAAAAAGAAAAAAGAAAAAAGAAAA	.	.	.	END=6961668;RU=aagaaaa;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.87995:4,4:1-4,1-4:7,22,0,0:4,7:NULL:235.531:366.612,131.36:0.650759,0.650759:6.73077e-21,0.113659,0.886439	0/0:30:0.999069:4,4:4-4,4-4:15,15,0,0:4,15:NULL:201.791:326.675,113.385:0.0,0.0:9.2e-44,0.00088725,0.999118
+chr1	6967994	.	TAATAATAATAA	.	.	.	END=6968005;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:4,4:4-4,4-4:20,12,0,0:4,20:NULL:189.935:366.612,131.36:0.0,0.0:0.0,7.90063e-06,0.999994	0/0:25:0.999557:4,4:4-4,4-4:15,10,0,0:4,15:NULL:149.73:326.675,113.385:0.0,0.0:7.03689e-40,0.000286317,0.999713
+chr1	6969238	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6969285;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.890333:25,25:21-25,21-25:8,11,0,12:25,8:4,1|7,1|8,4|10,2|11,1|17,2|21,1:240.234:366.612,131.36:1.97147,1.97147:2.2967e-14,0.0600529,0.940036	0/0:47:0.66372:24,24:23-24,23-24:5,21,0,20:24,5:4,1|6,2|9,1|11,1|12,2|13,1|14,5|15,3|17,1|20,1|21,1|23,1:371.431:326.675,113.385:0.439006,0.439006:1.94957e-06,0.16676,0.83331
+chr1	6970340	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6970399;RU=ag;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0794809:21,21:16-25,16-25:2,9,0,0:21,2:NULL:102.005:366.612,131.36:3.59565,3.59565:1.0,0.0,0.0	0/0:28:0.484082:30,30:29-30,29-30:4,12,0,11:30,4:6,1|7,1|9,1|10,1|12,3|18,1|22,1|23,1|30,1:220.422:326.675,113.385:0.414188,0.414188:1.43804e-12,0.213388,0.786655
+chr1	6970529	.	AGACAGACAGAC	AGACAGACAGACAGAC	.	.	END=6970540;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.165059:3,4:1-4,1-4:0,22,0,0:NULL:NULL:217.65:366.612,131.36:0.696456,0.905169:0.0883328,0.445598,0.466221	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:168.514:326.675,113.385:0.0,0.0:0.0,4.77189e-06,0.999995
+chr1	6974307	.	ACACACACACAC	.	.	.	END=6974318;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997981:6,6:6-6,6-6:12,18,0,4:6,12:4,1|5,3:247.705:366.612,131.36:0.0,0.0:2.70056e-25,0.000648585,0.999355	0/0:19:0.92277:6,6:6-7,6-7:7,9,0,2:6,7:5,2:129.578:326.675,113.385:0.486863,0.486863:8.90486e-15,0.0332825,0.966779
+chr1	6978082	.	ATTTATTTATTTATTT	.	.	.	END=6978097;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999585:4,4:4-4,4-4:15,13,0,0:4,15:NULL:178.159:366.612,131.36:0.0,0.0:3e-45,0.000318068,0.999683	0/0:25:0.999606:4,4:4-4,4-4:15,10,0,0:4,15:NULL:154.043:326.675,113.385:0.0,0.0:3e-45,0.000300969,0.999704
+chr1	6979840	.	TTCATTCATTCA	.	.	.	END=6979851;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999935:3,3:3-3,3-3:17,10,0,0:3,17:NULL:155.607:366.612,131.36:0.0,0.0:0.0,3.22506e-05,0.999971	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:165.684:326.675,113.385:0.0,0.0:0.0,3.1439e-06,1.0
+chr1	6981484	.	TGTCTGTCTGTCTGTC	.	.	.	END=6981499;RU=tgtc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:4,4:4-4,4-4:44,11,0,2:4,44:3,2:283.345:366.612,131.36:0.0,0.0:0.0,2.90605e-13,1.0	0/0:60:1.0:4,4:4-4,4-4:32,19,0,9:4,32:2,1|3,8:361.317:326.675,113.385:0.0,0.0:0.0,7.5252e-10,1.0
+chr1	6982427	.	TTGTTTGTTTGTTTGT	.	.	.	END=6982442;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:30,13,0,4:4,30:2,1|3,3:265.948:366.612,131.36:0.0,0.0:0.0,3.12693e-09,1.0	0/0:48:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,3:271.065:326.675,113.385:0.0,0.0:0.0,1.84623e-09,1.0
+chr1	6982601	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6982652;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.542982:12,12:11-12,11-12:11,20,0,5:11,3|12,8:4,1|5,1|6,1|8,1|9,1:272.772:366.612,131.36:0.45695,0.45695:1.0,0.0,0.0	0/2:28:0.312785:26,39:24-27,24-39:3,6,0,17:26,3:7,1|8,2|10,1|12,1|15,2|16,1|17,2|18,1|24,3|25,2|39,1:210.08:326.675,113.385:0.517131,6.22137:8.48768e-11,0.000485426,0.999515
+chr1	6983427	.	GAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGA	.	.	END=6983442;RU=ga;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0292991:9,9:9-14,9-14:0,7,0,0:NULL:NULL:66.6014:366.612,131.36:1.08487,1.08487:0.0,0.0,1.0	0/0:23:0.929127:8,8:7-8,7-8:15,8,0,0:7,2|8,13:NULL:140.313:326.675,113.385:0.431574,0.431574:5.41404e-20,0.0708413,0.929253
+chr1	6985748	.	AATCAATCAATCAATCAATCAATCAATC	AATCAATCAATCAATC	.	.	END=6985775;RU=aatc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0496217:4,4:2-5,2-5:0,13,0,2:NULL:2,1|4,1:132.329:366.612,131.36:0.874544,0.874544:0.610375,0.347611,0.0421121	0/0:56:1.0:7,7:7-7,7-7:33,14,0,9:7,33:3,2|4,2|5,2|6,3:328.098:326.675,113.385:0.0,0.0:0.0,3.53258e-10,1.0
+chr1	6985795	.	AACAACAACAACAACAAC	.	.	.	END=6985812;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999876:6,6:5-6,5-6:17,16,0,0:6,17:NULL:214.345:366.612,131.36:0.236383,0.236383:1.7e-44,8.97379e-05,0.999911	0/0:50:1.0:6,6:6-6,6-6:34,14,0,2:6,34:4,2:280.867:326.675,113.385:0.0,0.0:0.0,3.42017e-10,1.0
+chr1	6986592	.	AAACAAACAAACAAAC	AAACAAACAAAC	.	.	END=6986607;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.095574:3,3:1-4,1-4:0,14,0,2:NULL:3,2:145.263:366.612,131.36:0.896573,0.896573:0.27164,0.550752,0.177626	0/0:33:0.998937:4,4:4-4,4-4:13,17,0,3:4,13:2,1|3,2:226.162:326.675,113.385:0.0,0.0:7.04477e-36,0.000588515,0.999415
+chr1	6987484	.	AAGAAAGAAAGA	.	.	.	END=6987495;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.408:366.612,131.36:0.0,0.0:0.0,1.80572e-06,1.0	0/0:26:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:128.281:326.675,113.385:0.0,0.0:0.0,2.64797e-06,1.0
+chr1	6988550	.	TAAATAAATAAA	.	.	.	END=6988561;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999939:3,3:3-3,3-3:17,8,0,0:3,17:NULL:148.37:366.612,131.36:0.0,0.0:0.0,3.19832e-05,0.999971	0/0:24:1.00001:3,3:3-3,3-3:21,3,0,0:3,21:NULL:111.913:326.675,113.385:0.0,0.0:0.0,2.54549e-06,1.0
+chr1	6988683	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=6988726;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.021606:9,9:1-11,1-11:0,7,0,2:NULL:8,1|9,1:82.6237:366.612,131.36:3.94562,3.94562:0.459313,0.48336,0.0574912	0/0:32:0.467214:11,11:9-11,9-11:13,12,0,7:9,2|11,11:3,1|6,2|7,1|8,1|10,2:229.771:326.675,113.385:0.999559,0.999559:5.65804e-20,0.53254,0.467569
+chr1	6988729	.	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	.	.	END=6988989;RU=cctttcttc;PERIOD=9;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0270839:9,9:1-10,1-10:0,4,0,2:NULL:8,1|9,1:49.0823:366.612,131.36:3.8178,3.8178:1.0,0.0,0.0	2/3:74:0.229205:13,44:10-19,40-49:0,5,45,24:NULL:4,4|5,1|6,3|7,3|8,2|9,3|10,5|11,1|12,1|13,1:532.764:326.675,113.385:1.94191,2.30908:2.71327e-26,1.0,2.09857e-20
+chr1	6988990	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=6989021;RU=cttt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0460909:12,12:12-15,12-15:0,8,0,3:NULL:3,2|7,1:99.5242:366.612,131.36:1.27204,1.27204:0.0,0.0,1.0	0/0:52:1.00001:8,8:4-8,4-8:23,14,0,14:8,23:3,2|4,5|5,2|6,1|7,4:324.178:326.675,113.385:0.780108,0.780108:0.0,4.11433e-07,1.0
+chr1	6994475	.	CTGCTGCTGCTG	.	.	.	END=6994486;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.992411:4,4:4-4,4-4:11,14,0,0:4,11:NULL:170.899:366.612,131.36:0.0,0.0:1.1156e-33,0.00521109,0.994799	0/0:43:1.0:4,4:4-4,4-4:24,19,0,0:4,24:NULL:271.361:326.675,113.385:0.0,0.0:0.0,1.08504e-06,1.0
+chr1	6996371	.	AATAATAATAATAATAAT	.	.	.	END=6996388;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999768:6,6:6-6,6-6:16,12,0,0:6,16:NULL:180.067:366.612,131.36:0.0,0.0:8.38304e-39,0.000169845,0.999833	0/0:42:1.0:6,6:2-6,2-6:26,11,0,4:6,26:5,4:232.728:326.675,113.385:1.24611,1.24611:0.0,5.89955e-08,1.0
+chr1	6996545	.	AAGAAGAAGAAGAAG	.	.	.	END=6996559;RU=aag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994013:5,5:5-5,5-5:11,12,0,2:5,11:3,1|5,1:174.922:366.612,131.36:0.0,0.0:2.00511e-39,0.00311578,0.996891	0/0:34:1.0:5,5:5-5,5-5:26,6,0,2:5,26:4,1|5,1:173.389:326.675,113.385:0.0,0.0:0.0,3.43247e-08,1.0
+chr1	6998981	.	AAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAAT	.	.	END=6998995;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.997585:5,5:5-5,5-5:13,14,0,0:5,13:NULL:187.766:366.612,131.36:0.0,0.0:0.0,0.000720986,0.99928	0/0:24:0.999132:3,3:3-3,3-3:13,9,0,2:3,13:2,2:142.538:326.675,113.385:0.0,0.0:6e-45,0.000369236,0.999636
+chr1	7000338	.	AATAAATAAATAAATAAATAAATA	AATA	.	.	END=7000361;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0780744:1,1:1-3,1-3:0,14,0,0:NULL:NULL:128.907:366.612,131.36:0.40047,0.40047:0.578545,0.378725,0.0428552	0/0:28:0.999853:6,6:6-6,6-6:16,8,0,4:6,16:3,1|4,1|5,2:169.898:326.675,113.385:0.0,0.0:4.152e-42,6.63619e-05,0.999934
+chr1	7002437	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7002468;RU=ga;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:31:0.98158:16,17:15-17,15-17:8,19,0,3:16,4|17,4:6,1|7,1|14,1:246.594:366.612,131.36:0.342408,0.451337:8.76787e-11,0.0012311,0.998771	0/0:36:0.731673:16,16:12-16,12-16:17,17,0,0:15,4|16,13:NULL:248.743:326.675,113.385:1.0297,1.0297:1.31245e-14,0.268042,0.731961
+chr1	7002484	.	GAAAGGAAAGGAAAG	.	.	.	END=7002498;RU=gaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:251.333:366.612,131.36:0.0,0.0:0.0,2.95141e-07,1.0	0/0:34:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:213.569:326.675,113.385:0.0,0.0:0.0,1.18702e-05,0.999987
+chr1	7003509	.	TATATATATATA	.	.	.	END=7003520;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.994474:6,6:6-6,6-6:12,18,0,0:6,12:NULL:217.202:366.612,131.36:0.0,0.0:2.94885e-21,0.00378633,0.996224	0/0:25:0.996778:6,6:6-6,6-6:12,13,0,0:6,12:NULL:167.642:326.675,113.385:0.0,0.0:1.43452e-21,0.00203514,0.997973
+chr1	7004299	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7004318;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:228.653:366.612,131.36:0.0,0.0:0.0,7.67878e-06,0.999994	0/0:30:0.999979:4,4:3-4,3-4:17,9,0,3:4,17:3,3:174.62:326.675,113.385:0.35561,0.35561:0.0,1.85123e-05,0.999985
+chr1	7004803	.	CACACACACACACACACACACACACACACA	.	.	.	END=7004832;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999293:15,15:15-15,15-15:15,19,0,14:15,15:4,1|7,1|10,2|11,4|12,2|14,4:356.714:366.612,131.36:0.0,0.0:2.76952e-21,0.000211699,0.999789	0/0:58:0.706049:15,15:14-15,14-15:16,20,0,22:14,4|15,12:5,4|6,4|7,2|8,2|9,1|10,4|11,1|12,1|14,3:434.637:326.675,113.385:0.442564,0.442564:8.53683e-14,0.293692,0.706312
+chr1	7005829	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=7005885;RU=tgt;PERIOD=3;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:0.741956:19,19:17-20,17-20:10,26,0,18:18,2|19,8:4,1|5,1|6,3|10,2|13,2|14,2|16,2|17,3|18,1|19,1:432.146:366.612,131.36:0.775697,0.775697:9.4889e-20,0.252631,0.747375	0/0:41:0.997035:19,19:18-19,18-19:12,12,0,16:19,12:5,2|6,1|7,2|12,2|13,1|14,1|15,2|16,3|18,2:284.233:326.675,113.385:0.169767,0.169767:2.05796e-21,0.00117709,0.998829
+chr1	7006807	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7006830;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999794:6,6:6-6,6-6:15,11,0,7:6,15:3,1|4,2|5,4:211.852:366.612,131.36:0.0,0.0:0.0,0.000106426,0.999895	0/0:23:0.975827:6,6:6-6,6-6:8,10,0,5:6,8:2,1|4,2|5,2:156.199:326.675,113.385:0.0,0.0:1.54873e-27,0.0118326,0.988195
+chr1	7006964	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=7007007;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.979752:13,13:13-13,13-13:9,7,0,4:13,9:4,1|6,1|7,2:131.034:366.612,131.36:0.0,0.0:6.58584e-29,0.00497299,0.99504	0/0:17:0.758626:11,11:11-11,11-11:5,5,0,7:11,5:2,1|4,1|6,1|7,1|8,1|9,2:116.354:326.675,113.385:0.0990099,0.0990099:1.36893e-12,0.116742,0.88336
+chr1	7008700	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=7008763;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.497359:17,17:16-17,16-17:3,16,0,12:17,3:4,2|6,1|7,2|8,2|10,1|13,1|15,1|16,2:253.862:366.612,131.36:0.253975,0.253975:3.20725e-23,0.0799344,0.920163	0/0:22:0.508596:16,16:13-16,13-16:4,10,0,8:16,4:5,1|6,3|7,2|8,1|10,1:169.954:326.675,113.385:0.772658,0.772658:4.78346e-09,0.374145,0.625905
+chr1	7009944	.	AACAACAACAAC	.	.	.	END=7009955;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:4,4:4-4,4-4:24,6,0,0:4,24:NULL:146.992:366.612,131.36:0.0,0.0:0.0,4.95377e-07,1.0	0/0:16:0.994513:4,4:4-4,4-4:11,5,0,0:4,11:NULL:89.5565:326.675,113.385:0.0,0.0:6.90523e-37,0.0032162,0.996792
+chr1	7016143	.	ATGTTATGTTATGTT	.	.	.	END=7016157;RU=atgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:26,9,0,0:3,26:NULL:183.945:366.612,131.36:0.0,0.0:0.0,1.15585e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:31,19,0,0:3,31:NULL:302.422:326.675,113.385:0.0,0.0:0.0,2.5526e-09,1.0
+chr1	7018592	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7018643;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.518763:14,14:14-15,14-15:11,11,0,8:14,9|15,2:5,1|6,1|9,1|12,2|13,3:214.581:366.612,131.36:0.594554,0.594554:1.0,0.0,0.0	2/3:49:0.975679:25,28:25-34,28-32:10,12,0,25:25,5|28,5:4,1|5,1|6,1|7,1|11,1|17,2|18,1|20,4|21,2|22,2|23,3|24,2|25,2|27,1|32,1:382.265:326.675,113.385:3.4316,1.90016:1.06017e-15,0.977485,0.022559
+chr1	7022856	.	ACACACACACACACACACACACAC	ACACACACACAC	.	.	END=7022879;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:38:0.94614:6,12:4-12,12-12:10,19,0,8:6,2|12,8:4,1|6,1|9,1|10,4|11,1:294.203:366.612,131.36:2.66025,0.0:8.80497e-17,0.951905,0.0481708	0/0:25:0.830934:12,12:10-12,10-12:6,9,0,8:12,6:4,1|5,1|6,2|7,1|9,1|10,1|11,1:174.926:326.675,113.385:0.831212,0.831212:1.38565e-12,0.094323,0.905777
+chr1	7022880	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7022935;RU=ag;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:35:0.377048:22,34:22-22,18-35:9,20,0,3:22,9:5,1|13,1|34,1:259.569:366.612,131.36:0.278639,6.38699:7.71756e-05,0.999925,8.7181e-26	0/2:25:0.217122:28,32:26-30,26-32:3,11,0,9:28,3:6,1|8,1|18,1|21,1|23,1|26,2|27,1|29,1:192.037:326.675,113.385:0.717258,1.5095:5.02768e-11,0.00427917,0.995733
+chr1	7023312	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=7023410;RU=ctt;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.0671344:25,29:23-31,25-31:0,16,0,19:NULL:4,1|9,2|10,1|13,1|14,1|15,1|16,2|17,1|20,1|21,1|22,2|23,1|24,2|26,1|29,1:296.96:366.612,131.36:2.70302,2.1949:1.0,0.0,0.0	3/3:31:0.0272976:34,34:11-34,11-34:0,15,0,15:NULL:6,1|7,2|13,2|15,1|18,1|20,1|21,1|22,1|23,1|28,1|32,1|33,1|34,1:257.589:326.675,113.385:10.0786,10.0786:9.48561e-16,0.620223,0.379835
+chr1	7025016	.	AACCAACCAACC	.	.	.	END=7025027;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:226.678:366.612,131.36:0.0,0.0:0.0,7.01753e-06,0.999994	0/0:35:1.00001:3,3:3-3,3-3:20,12,0,3:3,20:2,3:205.946:326.675,113.385:0.0,0.0:0.0,3.0456e-06,1.0
+chr1	7026416	.	TTTATTTTATTTTAT	.	.	.	END=7026430;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999863:3,3:3-3,3-3:16,20,0,0:3,16:NULL:251.656:366.612,131.36:0.0,0.0:0.0,0.000104511,0.999896	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:168.583:326.675,113.385:0.0,0.0:0.0,3.49234e-07,1.0
+chr1	7028391	.	AATAAATAAATA	.	.	.	END=7028402;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.735:366.612,131.36:0.0,0.0:0.0,9.56457e-07,1.0	0/0:43:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:243.642:326.675,113.385:0.0,0.0:0.0,1.91427e-08,1.0
+chr1	7028876	.	TTTATTTATTTA	.	.	.	END=7028887;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999966:3,3:3-3,3-3:18,11,0,0:3,18:NULL:172.431:366.612,131.36:0.0,0.0:0.0,2.71628e-05,0.999972	0/0:29:0.999871:3,3:3-3,3-3:17,12,0,0:3,17:NULL:186.491:326.675,113.385:0.0,0.0:0.0,9.72933e-05,0.999903
+chr1	7029276	.	ACACACACACACACACACACACAC	.	.	.	END=7029299;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999467:12,12:12-13,12-13:15,19,0,10:12,15:7,3|8,1|10,2|11,4:313.42:366.612,131.36:0.21692,0.21692:3.2571e-23,0.000121464,0.99988	0/0:56:0.999972:12,12:12-14,12-14:18,20,0,15:12,18:5,3|6,2|7,2|9,4|10,2|11,2:383.754:326.675,113.385:0.617999,0.617999:4.03621e-28,1.31504e-05,0.999987
+chr1	7029315	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7029344;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999899:6,6:6-6,6-6:17,16,0,4:6,17:2,2|3,1|5,1:243.699:366.612,131.36:0.0,0.0:0.0,7.21659e-05,0.999932	0/0:45:1.0:6,6:6-6,6-6:24,17,0,4:6,24:2,1|3,1|5,2:282.108:326.675,113.385:0.0,0.0:0.0,3.38642e-07,1.0
+chr1	7032756	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=7032799;RU=aata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.970244:11,11:11-11,11-11:7,14,0,14:11,7:3,1|5,4|6,1|7,2|8,3|9,1|10,2:257.761:366.612,131.36:0.0,0.0:1.68122e-16,0.0127223,0.987305	0/0:30:0.989657:11,11:11-15,11-15:10,12,0,7:11,10:6,3|7,2|10,2:198.339:326.675,113.385:1.77026,1.77026:2.88596e-22,0.00340046,0.99661
+chr1	7032984	.	ACAAAAAAACAAAAAAACAAAAAA	.	.	.	END=7033007;RU=acaaaaaa;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.975755:3,3:3-3,3-3:9,14,0,0:3,9:NULL:160.968:366.612,131.36:0.19802,0.19802:2.95058e-28,0.0203616,0.97968	0/0:25:0.99989:3,3:3-3,3-3:16,6,0,3:3,16:2,3:138.409:326.675,113.385:0.0,0.0:0.0,4.93539e-05,0.999955
+chr1	7033046	.	AGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC,AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	END=7033061;RU=agac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:27:0.276065:4,17:3-4,3-17:13,10,0,3:3,6|4,7:13,2|14,1:202.123:366.612,131.36:0.412766,5.41922:4.18022e-24,6.21541e-06,0.999995	0/1:33:0.338812:4,14:4-4,4-14:22,8,0,3:4,22:7,1|10,1|14,1:200.432:326.675,113.385:0.0,3.25928:0.0,5.07546e-22,1.0
+chr1	7033993	.	TATATATATATA	TATATATATATATATATATATATATATATATATATATA	.	.	END=7034004;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0159096:19,19:1-20,1-20:0,5,0,3:NULL:9,1|12,1|19,1:72.9907:366.612,131.36:5.54252,5.54252:1.41404e-22,0.182165,0.817898	0/0:29:0.998488:6,6:6-6,6-6:13,16,0,0:6,13:NULL:199.889:326.675,113.385:0.0,0.0:8.53176e-25,0.000960543,0.999043
+chr1	7035493	.	CACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACA	.	.	END=7035530;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.876971:17,19:16-18,18-19:9,9,0,12:16,3|17,3|19,3:6,2|7,2|8,1|9,1|11,1|16,1|17,1|18,3:231.892:366.612,131.36:0.693494,0.382696:0.000484166,0.999074,0.000449598	0/0:34:0.607126:19,19:18-19,18-19:14,10,0,10:18,4|19,10:7,1|8,1|10,1|11,2|12,1|13,2|17,1|19,1:245.262:326.675,113.385:0.481803,0.481803:1.87697e-18,0.391868,0.608193
+chr1	7035536	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7035569;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.924009:14,16:14-16,16-16:8,13,0,3:14,3|16,5:5,1|8,1|10,1:182.436:366.612,131.36:0.951732,0.278639:0.996528,0.00347855,1.03467e-06	0/0:33:0.572888:17,17:17-18,17-18:20,10,0,3:16,3|17,14|18,3:5,1|8,1|13,1:222.459:326.675,113.385:0.475866,0.475866:2.53131e-18,0.000967349,0.999036
+chr1	7038709	.	AAATAAATAAAT	AAATAAATAAATAAATAAAT	.	.	END=7038720;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:21:1.0:3,5:3-3,5-5:10,9,0,2:3,7|5,3:5,2:141.417:366.612,131.36:0.0,0.0:1e-45,3.77514e-20,1.0	0/0:8:0.928445:3,3:3-3,3-3:7,1,0,0:3,7:NULL:37.2692:326.675,113.385:0.0,0.0:7.60169e-21,0.0294883,0.970568
+chr1	7038726	.	TAAATAAATAAATAAATAAATAAATAAATAAATAAA	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	.	.	END=7038761;RU=taaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.502446:11,11:8-11,8-11:4,7,0,0:11,4:NULL:80.8551:366.612,131.36:0.630406,0.630406:2.8178e-14,0.129084,0.871013	0/0:9:0.726846:9,9:9-9,9-9:5,2,0,2:9,5:3,1|5,1:53.6287:326.675,113.385:0.0,0.0:5.87215e-13,0.144436,0.855649
+chr1	7039465	.	TATATATATATATATATATATATATATATATA	TATATA,TATATATATATA	.	.	END=7039496;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:14:0.0164109:3,6:1-8,1-8:0,14,0,0:NULL:NULL:142.434:366.612,131.36:2.00357,2.14927:0.721099,0.264067,0.0148589	0/0:14:0.265955:16,16:4-16,4-16:5,5,0,0:16,5:NULL:74.2867:326.675,113.385:3.94882,3.94882:4.58141e-07,0.622396,0.377661
+chr1	7046294	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAATAAATAAAT	.	.	END=7046333;RU=aaat;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.993317:8,8:8-8,8-8:11,19,0,4:8,11:2,1|4,1|5,1|7,1:243.68:366.612,131.36:0.0,0.0:0.998276,0.00172933,1.72211e-26	0/0:54:0.999995:10,10:9-10,9-10:19,23,0,11:10,19:3,1|4,2|6,2|7,1|8,3|9,2:380.597:326.675,113.385:0.236383,0.236383:0.0,1.23677e-05,0.999987
+chr1	7046658	.	AATAAATAAATAAATA	AATA	.	.	END=7046673;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0869115:1,1:1-4,1-4:0,13,0,0:NULL:NULL:133.022:366.612,131.36:1.30693,1.30693:0.464361,0.44253,0.0932569	0/0:26:0.971748:4,4:4-4,4-4:9,17,0,0:4,9:NULL:183.662:326.675,113.385:0.0,0.0:7.18699e-20,0.0220878,0.977957
+chr1	7047632	.	ATTATTATTATT	.	.	.	END=7047643;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.97436:4,4:4-4,4-4:9,12,0,0:4,9:NULL:149.826:366.612,131.36:0.0,0.0:1.857e-26,0.0166801,0.983356	0/0:23:0.999909:4,4:4-4,4-4:17,6,0,0:4,17:NULL:120.143:326.675,113.385:0.0,0.0:0.0,5.72559e-05,0.999942
+chr1	7047891	.	TAATATAATATAATATAATATAATA	TAATATAATATAATATAATATAATATAATATAATA	.	.	END=7047915;RU=taata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998981:7,7:7-8,7-8:14,17,0,4:7,14:3,1|4,1|5,2:245.806:366.612,131.36:0.382696,0.382696:0.0,0.000136251,0.999865	0/0:26:0.997731:5,5:5-5,5-5:12,10,0,4:5,12:2,1|3,1|4,2:170.786:326.675,113.385:0.0,0.0:5.98175e-27,0.00149521,0.998511
+chr1	7050067	.	AAATAAATAAATAAAT	.	.	.	END=7050082;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997876:4,4:4-4,4-4:13,9,0,2:4,13:3,2:150.223:366.612,131.36:0.0,0.0:4.01234e-40,0.000994216,0.999012	0/0:29:0.999941:4,4:2-4,2-4:17,8,0,2:4,17:3,2:157.568:326.675,113.385:0.694341,0.694341:0.0,2.86342e-05,0.999972
+chr1	7052312	.	TTTCTTTCTTTC	.	.	.	END=7052323;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999977:3,3:3-3,3-3:17,19,0,2:3,17:2,2:259.885:366.612,131.36:0.0,0.0:0.0,2.67102e-05,0.999972	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.089:326.675,113.385:0.0,0.0:0.0,9.44406e-08,1.0
+chr1	7068379	.	CCCCCCACCCCCCACCCCCCA	CCCCCCA	.	.	END=7068399;RU=cccccca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.599661:3,3:1-3,1-3:4,7,0,0:3,4:NULL:76.9325:366.612,131.36:0.339533,0.339533:3.80433e-10,0.225051,0.774984	1/1:4:0.0466103:1,1:1-3,1-3:0,3,0,0:NULL:NULL:26.5653:326.675,113.385:0.913899,0.913899:0.162367,0.48561,0.352167
+chr1	7069168	.	TGTGTGTGTGTGTG	TGTGTGTGTGTG,TGTGTGTGTGTGTGTG	.	.	END=7069181;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.734558:6,8:6-8,8-8:20,13,0,0:6,2|8,18:NULL:214.145:366.612,131.36:0.98891,0.0:0.0,0.734637,0.265363	0/0:33:0.999851:7,7:6-7,6-7:16,14,0,2:7,16:6,2:203.023:326.675,113.385:0.345543,0.345543:3.63253e-33,8.08638e-05,0.999919
+chr1	7069209	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7069246;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.583046:19,19:16-20,16-20:5,17,0,3:19,5:9,1|10,1|17,1:203.784:366.612,131.36:1.39016,1.39016:2.35734e-07,0.292289,0.707716	0/0:40:0.993181:19,19:19-19,19-19:15,12,0,12:18,2|19,13:7,1|10,1|11,2|12,1|13,2|15,2|16,1|17,2:271.882:326.675,113.385:0.139319,0.139319:9.11502e-17,0.00584253,0.994173
+chr1	7071018	.	TTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTA	.	.	END=7071053;RU=tta;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999002:10,10:10-10,10-10:13,23,0,11:10,13:4,3|5,1|6,2|7,1|8,1|9,3:339.761:366.612,131.36:0.0,0.0:0.999697,0.00030462,1.39775e-29	0/0:26:0.979369:12,12:12-12,12-12:9,12,0,5:12,9:5,1|9,1|10,1|11,2:189.892:326.675,113.385:0.0,0.0:7.30704e-17,0.0105619,0.989462
+chr1	7072179	.	TTTGTTTGTTTG	.	.	.	END=7072190;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.00001:3,3:3-3,3-3:20,5,0,2:3,20:2,2:136.258:366.612,131.36:0.0,0.0:0.0,3.13871e-06,1.0	0/0:52:1.0:3,3:3-3,3-3:37,15,0,0:3,37:NULL:289.246:326.675,113.385:0.0,0.0:0.0,4.57678e-11,1.0
+chr1	7086512	.	TCCTTCCTTCCT	.	.	.	END=7086523;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:30,27,0,0:3,30:NULL:354.947:366.612,131.36:0.0,0.0:0.0,8.16899e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:19,15,0,0:3,19:NULL:209.826:326.675,113.385:0.0,0.0:0.0,9.0128e-06,0.999994
+chr1	7087714	.	TATATATATATATATATA	TATATA,TATATATATATATATA	.	.	END=7087731;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999984:3,3:3-3,3-3:19,20,0,0:3,19:NULL:257.181:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	2/0:14:0.933757:8,9:8-9,9-9:11,3,0,0:8,3|9,8:NULL:78.6639:326.675,113.385:0.478946,0.0:1.99405e-08,0.934517,0.0655771
+chr1	7088366	.	AAACAAACAAACAAAC	.	.	.	END=7088381;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:27,18,0,3:4,27:2,1|3,2:298.647:366.612,131.36:0.0,0.0:0.0,1.04635e-07,1.0	0/0:34:1.0:4,4:4-4,4-4:23,8,0,2:4,23:2,1|3,1:183.097:326.675,113.385:0.139319,0.139319:0.0,4.63816e-07,1.0
+chr1	7089402	.	AGGAGGAGGAGG	.	.	.	END=7089413;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.999055:4,4:4-4,4-4:14,5,0,0:4,14:NULL:104.682:366.612,131.36:0.0,0.0:0.0,0.000531556,0.99947	0/0:23:0.999212:4,4:4-4,4-4:14,9,0,0:4,14:NULL:136.969:326.675,113.385:0.0,0.0:0.0,0.00055484,0.999447
+chr1	7091385	.	ATCATCATCATCATC	.	.	.	END=7091399;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:22,19,0,3:5,22:3,1|4,2:285.323:366.612,131.36:0.0,0.0:0.0,1.23723e-06,1.0	0/0:25:0.999985:5,5:5-5,5-5:18,7,0,0:5,18:NULL:140.115:326.675,113.385:0.0,0.0:0.0,1.96216e-05,0.99998
+chr1	7091399	.	CACCACCACCACCAC	.	.	.	END=7091413;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:5,5:5-5,5-5:21,18,0,3:5,21:4,3:272.157:366.612,131.36:0.0,0.0:0.0,2.06007e-06,1.0	0/0:24:0.999984:5,5:5-5,5-5:18,6,0,0:5,18:NULL:130.27:326.675,113.385:0.0,0.0:0.0,2.13014e-05,0.999979
+chr1	7097340	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7097369;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.266045:16,21:15-16,15-22:15,13,0,11:15,5|16,10:6,1|7,2|8,2|10,1|11,1|12,1|14,1|15,1|19,1:287.967:366.612,131.36:0.169767,2.39935:2.43486e-36,8.03973e-08,1.0	0/0:34:0.979289:15,15:14-15,14-15:12,12,0,9:14,2|15,10:7,1|9,2|10,1|12,1|13,1|14,2|15,1:238.408:326.675,113.385:0.352842,0.352842:2.76799e-20,0.016334,0.983702
+chr1	7097804	.	ATAATAATAATA	.	.	.	END=7097815;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.996042:4,4:4-4,4-4:12,13,0,0:4,12:NULL:164.437:366.612,131.36:0.0,0.0:3.65495e-28,0.00297296,0.997034	0/0:29:0.999954:4,4:4-4,4-4:17,8,0,4:4,17:3,3|4,1:169.671:326.675,113.385:0.0,0.0:0.0,1.21917e-05,0.999987
+chr1	7099389	.	ATTTATTTATTTATTTATTTATTT	.	.	.	END=7099412;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:6,6:6-6,6-6:26,19,0,3:6,26:2,1|5,2:293.598:366.612,131.36:0.0,0.0:0.0,7.89356e-08,1.0	0/0:26:0.99991:6,6:6-6,6-6:17,6,0,3:6,17:3,2|4,1:150.344:326.675,113.385:0.0,0.0:1.42e-42,5.46034e-05,0.999948
+chr1	7099628	.	TGTGTGTGTGTG	.	.	.	END=7099639;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:6,6:6-6,6-6:33,18,0,6:6,33:4,5|5,1:335.292:366.612,131.36:0.0,0.0:0.0,7.73598e-10,1.0	0/0:73:1.0:6,6:6-7,6-7:49,14,0,9:5,2|6,47:4,3|5,5|7,1:422.624:326.675,113.385:0.431574,0.431574:0.0,5.61873e-11,1.0
+chr1	7099942	.	ATGTATGTATGTATGTATGT	.	.	.	END=7099961;RU=atgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:5,5:5-5,5-5:19,18,0,3:5,19:2,2|4,1:261.311:366.612,131.36:0.0,0.0:0.0,1.01711e-05,0.999993	0/0:68:1.0:5,5:5-5,5-5:35,26,0,7:5,35:2,1|3,2|4,4:429.734:326.675,113.385:0.0,0.0:0.0,9.13639e-11,1.0
+chr1	7101482	.	TTGTTGTTGTTGTTG	.	.	.	END=7101496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999921:5,5:5-5,5-5:17,12,0,3:5,17:3,1|4,2:197.488:366.612,131.36:0.0,0.0:0.0,4.4001e-05,0.999957	0/0:39:1.0:5,5:5-5,5-5:25,11,0,3:5,25:4,3:224.371:326.675,113.385:0.0,0.0:0.0,7.60404e-08,1.0
+chr1	7101721	.	AACAACAACAAC	.	.	.	END=7101732;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:2-4,2-4:25,19,0,2:4,25:3,2:281.334:366.612,131.36:0.569802,0.569802:0.0,2.04694e-07,1.0	0/0:44:1.0:4,4:4-4,4-4:26,15,0,3:4,26:3,3:260.772:326.675,113.385:0.0,0.0:0.0,4.34561e-08,1.0
+chr1	7102309	.	CAACAACAACAACAACAA	.	.	.	END=7102326;RU=caa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.854997:6,6:6-6,6-6:6,17,0,2:6,6:5,2:191.637:366.612,131.36:0.0,0.0:2.48895e-15,0.0832395,0.916856	0/0:25:0.977648:6,6:6-6,6-6:9,14,0,2:6,9:4,1|5,1:178.927:326.675,113.385:0.0,0.0:7.69728e-23,0.0128845,0.987142
+chr1	7112567	.	TGCTTGCTTGCT	.	.	.	END=7112578;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.531923:3,3:1-3,1-3:4,11,0,0:3,4:NULL:119.182:366.612,131.36:0.851255,0.851255:8.10748e-13,0.289411,0.710593	0/0:4:0.610326:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.7523:326.675,113.385:0.0,0.0:3.60438e-13,0.15294,0.847136
+chr1	7112580	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC,TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=7112635;RU=tccc;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:10:0.0426785:10,10:9-12,9-12:0,9,0,0:NULL:NULL:84.7417:366.612,131.36:0.960855,0.960855:0.690324,0.283001,0.0267151	1/1:7:0.0395119:9,9:4-9,4-9:0,1,0,6:NULL:3,2|4,2|7,1|8,1:51.8568:326.675,113.385:1.05556,1.05556:1.0,0.0,0.0
+chr1	7112643	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7112706;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0678086:10,10:8-11,8-11:0,10,0,2:NULL:7,1|10,1:107.562:366.612,131.36:0.725953,0.725953:1.0,0.0,0.0	2/2:4:0.0231414:17,17:11-17,11-17:0,1,0,3:NULL:5,1|16,1|17,1:30.1058:326.675,113.385:2.17123,2.17123:1.44707e-15,0.562026,0.438073
+chr1	7114417	.	TATTTATTTATT	.	.	.	END=7114428;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,11,0,3:3,21:2,3:207.032:366.612,131.36:0.0,0.0:0.0,1.37851e-06,1.0	0/0:29:0.999531:3,3:3-3,3-3:14,12,0,3:3,14:2,3:194.42:326.675,113.385:0.0,0.0:0.0,0.000209233,0.999795
+chr1	7114880	.	GTTTGTTTGTTT	.	.	.	END=7114891;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.99997:3,3:3-3,3-3:18,20,0,0:3,18:NULL:249.412:366.612,131.36:0.0,0.0:0.0,3.72643e-05,0.999964	0/0:51:1.0:3,3:3-3,3-3:39,10,0,2:3,39:2,2:260.0:326.675,113.385:0.0,0.0:0.0,5.14724e-12,1.0
+chr1	7114905	.	TGCCTGCCTGCCTGCCTGCC	.	.	.	END=7114924;RU=tgcc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999735:5,5:5-5,5-5:15,21,0,4:5,15:2,1|3,1|4,2:277.064:366.612,131.36:0.0,0.0:0.0,0.000197653,0.999804	0/0:60:1.0:5,5:5-5,5-5:32,19,0,9:5,32:3,5|4,4:364.328:326.675,113.385:0.0,0.0:0.0,7.61377e-10,1.0
+chr1	7114923	.	CCTTCCTTCCTT	.	.	.	END=7114934;RU=cctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999925:3,3:3-3,3-3:17,18,0,0:3,17:NULL:228.78:366.612,131.36:0.0,0.0:0.0,7.08889e-05,0.999932	0/0:53:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:294.268:326.675,113.385:0.0,0.0:0.0,1.28063e-10,1.0
+chr1	7115852	.	CAACAACAACAA	.	.	.	END=7115863;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.995236:4,4:4-4,4-4:11,29,0,2:4,11:3,1|4,1:335.829:366.612,131.36:0.0,0.0:4.37565e-40,0.00359673,0.996413	0/0:38:1.00001:4,4:4-10,4-10:21,16,0,0:4,21:NULL:229.452:326.675,113.385:2.98215,2.98215:0.0,5.39507e-06,0.999995
+chr1	7115879	.	AACCAACCAACCAACCAACC	.	.	.	END=7115898;RU=aacc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.996785:5,5:5-5,5-5:12,25,0,2:5,12:2,1|4,1:301.208:366.612,131.36:0.0,0.0:4.2689e-36,0.00270055,0.997306	0/0:34:0.999855:5,5:5-5,5-5:16,15,0,3:5,16:2,2|4,1:224.039:326.675,113.385:0.0,0.0:0.0,0.000123741,0.999879
+chr1	7116409	.	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7116432;RU=ttg;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.00001:8,8:8-8,8-8:21,21,0,4:8,21:3,1|4,2|7,1:303.429:366.612,131.36:0.0,0.0:0.0,3.5402e-06,1.0	0/0:38:1.0:8,8:8-8,8-8:20,13,0,5:8,20:5,1|6,3|7,1:239.316:326.675,113.385:0.0,0.0:0.0,4.78065e-06,0.999995
+chr1	7117084	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=7117101;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999899:6,6:6-6,6-6:17,5,0,0:6,17:NULL:115.028:366.612,131.36:0.0,0.0:1e-45,7.1154e-05,0.999932	0/0:30:0.99988:6,6:6-6,6-6:16,11,0,3:6,16:5,3:187.085:326.675,113.385:0.0,0.0:4.64e-43,5.67073e-05,0.999947
+chr1	7117723	.	TTATTTATTTAT	.	.	.	END=7117734;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999944:3,3:3-3,3-3:17,19,0,0:3,17:NULL:241.297:366.612,131.36:0.0,0.0:0.0,4.02304e-05,0.999963	.
+chr1	7123652	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATATATATA	.	.	END=7123683;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0256018:10,10:10-17,10-17:0,12,0,0:NULL:NULL:105.881:366.612,131.36:2.26765,2.26765:0.487018,0.42469,0.0883901	2/2:4:0.0176259:14,14:14-16,14-16:0,2,0,0:NULL:NULL:18.051:326.675,113.385:0.668445,0.668445:0.262568,0.499919,0.237526
+chr1	7123681	.	ATAGATAGATAGATAG	.	.	.	END=7123696;RU=atag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.308041:4,4:1-6,1-6:3,13,0,0:4,3:NULL:127.107:366.612,131.36:1.2509,1.2509:1.57402e-06,0.425549,0.574539	0/0:8:0.467441:4,4:4-4,4-4:3,3,0,2:4,3:3,2:52.7516:326.675,113.385:0.139319,0.139319:7.90252e-07,0.195937,0.804113
+chr1	7127713	.	ATGCATGCATGC	.	.	.	END=7127724;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.998886:3,3:3-3,3-3:13,9,0,0:3,13:NULL:135.151:366.612,131.36:0.0,0.0:4e-45,0.000670271,0.999332	0/0:22:0.999502:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.86:326.675,113.385:0.0,0.0:0.0,0.000298726,0.999704
+chr1	7129508	.	GCCTGCCTGCCT	.	.	.	END=7129519;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.196:366.612,131.36:0.0,0.0:0.0,6.69502e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:188.359:326.675,113.385:0.0,0.0:0.0,8.97093e-07,1.0
+chr1	7129995	.	AGCAGCAGCAGC	.	.	.	END=7130006;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:23,24,0,2:4,23:3,2:327.467:366.612,131.36:0.0,0.0:0.0,7.46945e-07,1.0	0/0:54:1.0:4,4:4-4,4-4:40,14,0,0:4,40:NULL:287.299:326.675,113.385:0.0,0.0:0.0,8.80671e-12,1.0
+chr1	7138899	.	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC,CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	.	.	END=7138976;RU=cctctc;PERIOD=6;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.097887:10,12:10-13,10-13:0,9,0,12:NULL:3,2|4,2|5,1|6,2|7,2|8,1|10,2:167.19:366.612,131.36:1.17651,1.02837:0.410451,0.467083,0.122569	0/0:41:0.611322:13,13:11-13,11-13:4,15,0,22:13,4:3,2|4,5|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2:308.531:326.675,113.385:0.474835,0.474835:6.11111e-08,0.261255,0.738746
+chr1	7139015	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7139054;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.777986:24,24:16-25,16-25:6,14,0,7:24,6:11,1|13,1|18,1|21,2|22,1|23,1:211.599:366.612,131.36:4.19713,4.19713:0.0,0.0157563,0.984278	0/1:52:0.615788:20,22:20-20,19-22:21,16,0,15:19,6|20,15:7,1|9,1|10,1|12,1|14,4|16,1|17,2|19,3|22,1:384.84:326.675,113.385:0.0,1.01136:3.32272e-17,0.000540725,0.999462
+chr1	7139855	.	CAACAACAACAA	.	.	.	END=7139866;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:25,18,0,4:4,25:3,4:286.567:366.612,131.36:0.0,0.0:0.0,1.39598e-07,1.0	0/0:53:1.0:4,4:4-4,4-4:29,22,0,2:4,29:3,2:332.281:326.675,113.385:0.0,0.0:0.0,8.94474e-09,1.0
+chr1	7141910	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7141955;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:68:0.944554:19,19:19-20,19-20:8,31,0,27:19,8:5,1|6,1|7,1|8,1|9,2|10,6|11,2|12,2|13,1|14,2|15,5|19,3:539.829:366.612,131.36:0.358902,0.358902:0.995439,0.00457489,4.49258e-22	0/0:78:0.828414:23,23:20-23,20-23:9,33,0,35:22,2|23,7:5,2|6,2|8,2|9,5|10,2|12,1|13,3|14,9|16,1|18,2|19,2|20,1|21,1|22,1|23,1:617.134:326.675,113.385:1.08749,1.08749:7.09369e-14,0.154714,0.845364
+chr1	7142903	.	TTTATTTATTTA	.	.	.	END=7142914;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999657:3,3:3-3,3-3:15,3,0,0:3,15:NULL:88.4566:366.612,131.36:0.0,0.0:4e-45,0.000127952,0.999873	0/0:25:1.00001:3,3:3-4,3-4:21,3,0,0:3,21:NULL:110.108:326.675,113.385:0.298675,0.298675:0.0,2.16394e-06,1.0
+chr1	7149749	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=7149768;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999981:10,10:10-10,10-10:19,11,0,5:10,19:4,1|6,1|7,1|9,2:217.879:366.612,131.36:0.0,0.0:1.71733e-30,1.14603e-05,0.999988	0/0:61:1.0:10,10:10-10,10-10:33,18,0,9:10,33:5,2|6,2|7,2|9,3:372.271:326.675,113.385:0.0,0.0:0.0,1.25285e-09,1.0
+chr1	7150526	.	CAGCCAGCCAGC	.	.	.	END=7150537;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:217.341:366.612,131.36:0.0,0.0:0.0,2.87344e-06,1.0	0/0:55:1.0:3,3:3-3,3-3:42,13,0,0:3,42:NULL:281.387:326.675,113.385:0.0,0.0:0.0,1.12619e-12,1.0
+chr1	7151580	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7151625;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.907183:22,22:21-23,21-23:13,20,0,7:21,3|22,10:5,1|8,1|10,1|13,1|15,1|17,1|22,1:305.099:366.612,131.36:0.38423,0.38423:0.996535,0.00347349,1.51364e-09	1/0:46:0.948189:22,23:21-23,22-23:10,15,0,21:21,2|22,3|23,5:5,2|7,1|8,1|11,2|12,2|13,2|14,3|15,1|17,1|19,1|20,1|22,4:357.742:326.675,113.385:0.554102,0.317759:0.00154081,0.961704,0.0368281
+chr1	7152237	.	GTTGTTGTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=7152266;RU=gtt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999992:10,10:10-10,10-10:19,15,0,11:10,19:4,2|5,3|7,1|8,2|9,3:308.082:366.612,131.36:0.0,0.0:4.55911e-36,1.42231e-05,0.999987	0/0:42:1.0:10,10:10-10,10-10:24,11,0,7:10,24:3,1|6,1|8,2|9,3:248.698:326.675,113.385:0.0,0.0:0.0,2.10796e-07,1.0
+chr1	7157339	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7157358;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.946256:4,4:1-4,1-4:8,27,0,4:4,8:2,1|3,3:311.435:366.612,131.36:0.5093,0.5093:4.82258e-26,0.0315994,0.968457	0/0:31:0.999938:4,4:4-4,4-4:17,12,0,2:4,17:3,2:192.613:326.675,113.385:0.0,0.0:0.0,4.32609e-05,0.999957
+chr1	7157442	.	TTTTGGTTTTTGGTTTTTGGT	.	.	.	END=7157462;RU=ttttggt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:235.917:366.612,131.36:0.0,0.0:0.0,1.75816e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:175.786:326.675,113.385:0.0,0.0:0.0,8.52949e-06,0.999994
+chr1	7157813	.	CAAACAAACAAACAAA	.	.	.	END=7157828;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999842:4,4:4-4,4-4:16,10,0,3:4,16:3,3:172.962:366.612,131.36:0.0,0.0:0.0,6.26255e-05,0.99994	0/0:52:1.0:4,4:4-4,4-4:23,24,0,5:4,23:3,5:345.664:326.675,113.385:0.0,0.0:0.0,5.28929e-07,1.0
+chr1	7164237	.	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	.	.	END=7164331;RU=tctct;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.0866162:21,21:20-23,20-23:0,17,0,24:NULL:2,2|5,1|6,1|7,3|9,4|10,4|11,1|12,1|13,1|16,1|17,1|18,2|19,1|21,1:332.371:366.612,131.36:1.2242,1.2242:0.0,0.0,1.0	0/0:40:0.134004:19,19:11-19,11-19:2,20,0,17:19,2:3,2|5,1|6,1|7,3|8,1|9,1|10,1|12,1|13,1|14,2|15,2|18,1:316.316:326.675,113.385:2.63675,2.63675:0.000196628,0.75379,0.246027
+chr1	7165649	.	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	.	END=7165672;RU=tttgtt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999941:4,4:4-4,4-4:17,14,0,4:4,17:3,4:228.493:366.612,131.36:0.0,0.0:0.0,3.76231e-05,0.999964	0/0:38:0.997965:4,4:4-4,4-4:11,22,0,5:4,11:3,5:280.981:326.675,113.385:0.0,0.0:2.16762e-36,0.00154586,0.998459
+chr1	7167675	.	TTTGTTTGTTTG	.	.	.	END=7167686;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99977:3,3:3-3,3-3:15,10,0,2:3,15:2,2:168.111:366.612,131.36:0.0,0.0:0.0,9.43e-05,0.999909	0/0:20:0.999928:3,3:3-3,3-3:17,3,0,0:3,17:NULL:92.8925:326.675,113.385:0.0,0.0:0.0,3.49392e-05,0.999964
+chr1	7172621	.	AAAAGAAAAGAAAAG	.	.	.	END=7172635;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:23,16,0,2:3,23:2,2:246.775:366.612,131.36:0.0,0.0:0.0,4.23121e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:30,9,0,2:3,30:2,2:218.999:326.675,113.385:0.0,0.0:0.0,3.21717e-09,1.0
+chr1	7173577	.	ACACACACACAC	.	.	.	END=7173588;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:6,6:6-6,6-6:28,16,0,0:6,28:NULL:253.69:366.612,131.36:0.0,0.0:0.0,2.40619e-08,1.0	0/0:49:1.0:6,6:6-6,6-6:35,13,0,0:6,35:NULL:256.223:326.675,113.385:0.0990099,0.0990099:0.0,3.04857e-10,1.0
+chr1	7179754	.	AATAATAATAATAAT	.	.	.	END=7179768;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999533:5,5:5-5,5-5:14,12,0,3:5,14:3,1|4,2:185.772:366.612,131.36:0.0,0.0:1.8076e-36,0.000174118,0.999827	0/0:26:0.998277:5,5:4-5,4-5:12,11,0,2:5,12:4,2:166.309:326.675,113.385:0.36513,0.36513:2.64615e-31,0.00105222,0.998952
+chr1	7183424	.	AAGAAAGAAAGAAAGA	.	.	.	END=7183439;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999955:4,4:3-4,3-4:16,14,0,4:4,16:2,1|3,3:226.025:366.612,131.36:0.284901,0.284901:0.0,2.46733e-05,0.999978	0/0:48:1.0:4,4:4-4,4-4:35,9,0,3:4,35:2,1|3,2:247.573:326.675,113.385:0.0,0.0:0.0,9.05384e-11,1.0
+chr1	7187849	.	TGTGTGTGTGTGTG	.	.	.	END=7187862;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:7,7:7-8,7-8:20,17,0,0:7,20:NULL:239.511:366.612,131.36:0.284901,0.284901:1.26e-43,8.33049e-06,0.999994	0/0:23:0.999325:7,7:7-7,7-7:14,9,0,0:7,14:NULL:139.81:326.675,113.385:0.0,0.0:6.28781e-31,0.000398072,0.999605
+chr1	7189612	.	AATCAATCAATC	.	.	.	END=7189623;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:32,14,0,2:3,32:2,2:267.131:366.612,131.36:0.0,0.0:0.0,1.29813e-09,1.0	0/0:26:0.999995:3,3:3-4,3-4:19,6,0,0:3,19:NULL:132.971:326.675,113.385:0.382696,0.382696:0.0,1.15177e-05,0.999987
+chr1	7196731	.	GGGTGGGTGGGT	.	.	.	END=7196742;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.259324:3,3:3-6,3-6:2,10,0,0:3,2:NULL:94.8097:366.612,131.36:1.03142,1.03142:3.4255e-06,0.28281,0.717196	0/0:23:0.265731:3,3:2-6,2-6:2,21,0,0:3,2:NULL:186.44:326.675,113.385:0.686818,0.686818:5.23069e-06,0.314433,0.685577
+chr1	7200628	.	TATTTATTTATT	.	.	.	END=7200639;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:2-3,2-3:20,23,0,0:3,20:NULL:284.103:366.612,131.36:0.284901,0.284901:0.0,5.16915e-06,0.999995	0/0:11:0.93621:3,3:3-3,3-3:7,4,0,0:3,7:NULL:63.2243:326.675,113.385:0.0,0.0:1.08546e-20,0.0320985,0.967963
+chr1	7202878	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7202915;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:0.972029:19,19:18-19,18-19:20,22,0,10:18,5|19,15:5,1|6,1|9,1|10,1|12,1|13,2|16,1|17,1|18,1:384.392:366.612,131.36:0.438559,0.438559:6.84937e-17,0.027957,0.972098	0/0:47:0.474592:19,19:19-20,19-20:11,19,0,16:19,9|20,2:4,1|6,1|8,2|9,1|11,4|13,2|16,1|17,2|18,2:353.673:326.675,113.385:0.478127,0.478127:1.97729e-13,0.00220667,0.997799
+chr1	7211598	.	TTAATTAATTAA	.	.	.	END=7211609;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:217.659:366.612,131.36:0.0,0.0:0.0,3.9667e-06,0.999995	0/0:22:0.999911:3,3:3-3,3-3:16,6,0,0:3,16:NULL:121.627:326.675,113.385:0.0,0.0:0.0,5.47336e-05,0.999948
+chr1	7211666	.	TTTATTTATTTA	.	.	.	END=7211677;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:21,17,0,4:3,21:2,4:261.473:366.612,131.36:0.0,0.0:0.0,1.59179e-06,1.0	0/0:40:1.0:3,3:3-3,3-3:22,18,0,0:3,22:NULL:247.566:326.675,113.385:0.0,0.0:0.0,1.2383e-06,1.0
+chr1	7211691	.	ATTGATTGATTG	.	.	.	END=7211702;RU=attg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:41,9,0,3:3,41:2,3:263.741:366.612,131.36:0.0,0.0:0.0,2.13209e-12,1.0	0/0:47:1.0:3,3:3-3,3-3:29,16,0,2:3,29:2,2:269.281:326.675,113.385:0.0,0.0:0.0,6.33694e-09,1.0
+chr1	7217580	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=7217607;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.75922:15,15:13-15,13-15:11,21,0,2:14,3|15,8:7,1|13,1:255.373:366.612,131.36:0.573745,0.573745:2.97386e-18,0.00496799,0.995046	0/0:29:0.860925:14,14:10-15,10-15:7,15,0,4:14,7:6,1|9,1|10,1|12,1:198.8:326.675,113.385:2.02736,2.02736:1.63669e-09,0.0777891,0.922306
+chr1	7219811	.	ACACACACACACACACACACACACACAC	.	.	.	END=7219838;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.561237:14,14:11-15,11-15:12,13,0,3:13,3|14,9:7,1|8,1|11,1:197.929:366.612,131.36:1.20776,1.20776:9.43812e-11,0.436715,0.563388	0/0:38:0.999919:14,14:14-14,14-14:18,8,0,9:14,18:6,1|7,3|8,2|9,2|14,1:222.087:326.675,113.385:0.0990099,0.0990099:1.05852e-33,3.29776e-05,0.99997
+chr1	7226245	.	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	.	.	END=7226304;RU=ggcagg;PERIOD=6;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.558807:9,9:5-9,5-9:5,25,0,7:9,5:3,3|4,1|6,1|8,2:308.032:366.612,131.36:1.05035,1.05035:0.971675,0.0283795,9.27092e-13	0/0:39:0.550706:10,10:3-10,3-10:3,20,0,13:10,3:2,1|3,1|4,2|6,1|7,1|8,3|9,4:288.409:326.675,113.385:1.81796,1.81796:2.69798e-05,0.369363,0.630662
+chr1	7227370	.	AAATAAAATAAAATAAAATAAAATA	.	.	.	END=7227394;RU=aaata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.994263:5,5:5-5,5-5:11,17,0,7:5,11:2,2|3,4|4,1:255.27:366.612,131.36:0.0,0.0:8.55266e-37,0.00397439,0.996036	0/0:37:1.0:5,5:5-5,5-5:23,10,0,4:5,23:3,2|4,2:209.855:326.675,113.385:0.0,0.0:0.0,4.30756e-07,1.0
+chr1	7240279	.	ATTTATTTATTT	.	.	.	END=7240290;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:175.037:366.612,131.36:0.0,0.0:0.0,1.48899e-06,1.0	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:153.32:326.675,113.385:0.0,0.0:0.0,1.07333e-05,0.999993
+chr1	7240750	.	ATGCATGCATGC	.	.	.	END=7240761;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999371:3,3:3-3,3-3:14,14,0,0:3,14:NULL:180.484:366.612,131.36:0.0,0.0:9.596e-42,0.00036374,0.999637	0/0:21:0.997102:3,3:3-3,3-3:12,9,0,0:3,12:NULL:128.833:326.675,113.385:0.0,0.0:1.46053e-35,0.00175663,0.998247
+chr1	7241788	.	TCTCTCTCTCTCTC	.	.	.	END=7241801;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.995579:7,7:7-7,7-7:11,12,0,4:7,11:5,1|6,3:188.603:366.612,131.36:0.0,0.0:5.84163e-25,0.00174596,0.998261	0/0:21:0.99991:7,7:7-7,7-7:17,4,0,0:7,17:NULL:106.626:326.675,113.385:0.0,0.0:1.80641e-38,5.65364e-05,0.999947
+chr1	7245079	.	ATAATAATAATA	.	.	.	END=7245090;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998856:4,4:4-4,4-4:13,13,0,0:4,13:NULL:167.994:366.612,131.36:0.0,0.0:8.78662e-34,0.000611726,0.999392	0/0:21:0.946898:4,4:4-4,4-4:8,13,0,0:4,8:NULL:150.095:326.675,113.385:0.0,0.0:7.85469e-21,0.0389249,0.961143
+chr1	7247751	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7247798;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:51:0.868045:24,25:22-24,22-25:14,20,0,16:22,3|23,3|24,8:6,2|7,1|8,1|9,2|11,1|12,1|13,1|16,1|17,1|18,3|20,1|25,1:402.153:366.612,131.36:0.803751,1.19724:2.11915e-11,0.00923074,0.990791	0/2:31:0.312892:24,29:12-24,12-29:5,11,0,13:24,5:6,2|7,1|8,1|9,1|10,1|12,1|13,2|15,1|19,1|21,1|29,1:231.449:326.675,113.385:4.3687,7.89588:8.50332e-13,1.16424e-06,1.0
+chr1	7253471	.	TAAATAAATAAA	.	.	.	END=7253482;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999982:3,3:3-3,3-3:18,10,0,0:3,18:NULL:163.726:366.612,131.36:0.0,0.0:0.0,2.50208e-05,0.999978	0/0:17:0.995584:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.4252:326.675,113.385:0.0,0.0:3.59897e-33,0.00242419,0.997585
+chr1	7253491	.	ATATATATATATAT	.	.	.	END=7253504;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.998169:7,7:7-7,7-7:13,11,0,0:7,13:NULL:153.192:366.612,131.36:0.0,0.0:3.80595e-25,0.00114606,0.99886	0/0:19:0.999227:7,7:7-7,7-7:14,5,0,0:7,14:NULL:101.671:326.675,113.385:0.0,0.0:1.73846e-27,0.000431609,0.999569
+chr1	7254256	.	CCCACCCACCCA	.	.	.	END=7254267;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:28,17,0,0:3,28:NULL:260.773:366.612,131.36:0.0,0.0:0.0,1.17482e-08,1.0	0/0:22:0.999886:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.393:326.675,113.385:0.0,0.0:0.0,7.30345e-05,0.999926
+chr1	7256849	.	ATTTATTTATTT	.	.	.	END=7256860;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:21,16,0,0:3,21:NULL:233.195:366.612,131.36:0.0,0.0:0.0,4.97224e-06,0.999995	0/0:43:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:241.71:326.675,113.385:0.0,0.0:0.0,1.21702e-08,1.0
+chr1	7260017	.	TATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTAT	.	.	END=7260043;RU=tat;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:0.998782:10,10:7-10,7-10:14,29,0,7:10,14:3,2|5,2|7,1|8,1|9,1:388.096:366.612,131.36:1.06766,1.06766:3.65611e-39,0.000746253,0.999256	0/0:35:0.999432:9,9:9-10,9-10:15,13,0,5:9,15:4,2|6,1|8,2:225.477:326.675,113.385:0.322657,0.322657:6.9475e-26,0.000247089,0.999757
+chr1	7267550	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7267573;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:72:0.991578:12,12:11-12,11-12:33,30,0,8:11,6|12,25|13,2:5,1|6,1|7,1|8,1|11,4:493.028:366.612,131.36:0.452422,0.452422:6.60644e-32,0.00844298,0.991577	0/0:42:0.999214:12,12:11-12,11-12:24,10,0,8:11,3|12,21:7,1|8,1|9,2|10,2|11,2:263.425:326.675,113.385:0.169767,0.169767:3.8886e-28,0.000792244,0.999211
+chr1	7269602	.	TGTTTGTTTGTT	.	.	.	END=7269613;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:3,3:3-3,3-3:36,27,0,0:3,36:NULL:388.619:366.612,131.36:0.0,0.0:0.0,4.76789e-11,1.0	0/0:53:1.0:3,3:3-3,3-3:30,23,0,0:3,30:NULL:328.499:326.675,113.385:0.0,0.0:0.0,1.00681e-08,1.0
+chr1	7269942	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7269983;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:71:0.289082:21,21:21-31,21-31:23,27,0,21:20,2|21,18|22,3:5,1|6,4|7,2|9,1|10,1|11,3|12,1|14,4|15,1|20,1|21,1|29,1:540.445:366.612,131.36:4.00162,4.00162:2.35062e-28,2.28465e-05,0.999979	0/0:58:0.957569:21,21:21-22,21-22:21,21,0,14:19,2|21,16|22,3:4,1|5,2|6,2|7,1|11,2|13,1|14,1|15,2|17,1|18,1:410.119:326.675,113.385:0.480581,0.480581:1.11615e-18,0.00176366,0.99824
+chr1	7281471	.	AGCAGCAGCAGC	.	.	.	END=7281482;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,17,0,0:4,26:NULL:253.314:366.612,131.36:0.0,0.0:0.0,1.49434e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:27,12,0,2:4,27:3,2:231.62:326.675,113.385:0.0,0.0:0.0,4.11805e-08,1.0
+chr1	7281705	.	ACCCACCCACCC	.	.	.	END=7281716;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.921271:3,3:1-3,1-3:8,14,0,0:3,8:NULL:161.358:366.612,131.36:0.339533,0.339533:5.11599e-23,0.0587992,0.941284	0/0:24:0.994423:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.602:326.675,113.385:0.0,0.0:1.21422e-32,0.00349456,0.996513
+chr1	7287856	.	CTGCTGCTGCTG	.	.	.	END=7287867;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.00001:4,4:4-4,4-4:22,31,0,2:4,22:3,2:387.235:366.612,131.36:0.0,0.0:0.0,1.92848e-06,1.0	0/0:49:1.0:4,4:4-4,4-4:28,19,0,2:4,28:3,2:295.475:326.675,113.385:0.0,0.0:0.0,1.55583e-08,1.0
+chr1	7289516	.	AACAACAACAACAACAACAACAAC	.	.	.	END=7289539;RU=aac;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999984:8,8:7-8,7-8:18,22,0,8:8,18:4,1|5,2|7,4|8,1:337.307:366.612,131.36:0.195027,0.195027:0.0,7.08475e-06,0.999994	0/0:64:1.0:8,8:8-8,8-8:32,21,0,10:8,32:4,3|5,2|6,1|7,4:395.626:326.675,113.385:0.0,0.0:0.0,7.39514e-10,1.0
+chr1	7295421	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=7295444;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997089:6,6:6-6,6-6:12,14,0,2:6,12:3,2:198.845:366.612,131.36:0.0,0.0:1.10866e-29,0.00180377,0.998201	0/0:20:0.985667:6,6:6-6,6-6:10,8,0,2:6,10:2,1|3,1:133.664:326.675,113.385:0.0,0.0:8.02214e-25,0.0101885,0.989835
+chr1	7300043	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7300082;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.791622:21,22:21-22,21-22:5,21,0,11:21,2|22,3:5,1|8,2|9,2|16,1|17,1|19,1|20,2|21,1:300.216:366.612,131.36:0.489073,0.253975:2.05885e-32,0.0041394,0.99587	0/3:31:0.271667:20,31:20-21,20-33:5,14,0,11:20,5:7,1|8,2|10,2|11,1|13,1|15,1|16,1|18,1|30,1:249.731:326.675,113.385:0.311527,5.17131:1.2747e-12,9.41717e-07,1.0
+chr1	7308819	.	CTTCCTTCCTTC	.	.	.	END=7308830;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:19,17,0,0:3,19:NULL:235.2:366.612,131.36:0.0,0.0:0.0,8.92855e-06,0.999994	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:176.634:326.675,113.385:0.0,0.0:0.0,5.62191e-06,0.999995
+chr1	7311860	.	AATAAATAAATA	.	.	.	END=7311871;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:243.629:366.612,131.36:0.0,0.0:0.0,1.32772e-06,1.0	0/0:35:1.00001:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.639:326.675,113.385:0.0,0.0:0.0,3.8687e-06,1.0
+chr1	7312335	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7312382;RU=ga;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:40:0.627028:26,27:26-27,26-27:6,19,0,15:26,3|27,3:5,1|6,1|10,1|11,1|12,1|14,1|17,2|18,2|20,1|21,2|24,1|26,1:327.935:366.612,131.36:0.499387,0.270063:1.13217e-27,0.00412896,0.995884	0/0:24:0.366625:24,24:21-25,21-25:4,11,0,7:24,4:4,1|9,1|13,1|19,2|20,2:184.691:326.675,113.385:1.32681,1.32681:3.50187e-05,0.22487,0.775126
+chr1	7317649	.	TATATATATATATATATATATATATATATATATA	TATATATATA	.	.	END=7317682;RU=ta;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00159136:5,5:1-5,1-5:0,4,0,0:NULL:NULL:38.0264:366.612,131.36:1.9367,1.9367:0.214444,0.566663,0.218941	0/0:5:0.214537:17,17:12-17,12-17:3,1,0,0:17,3:NULL:23.9926:326.675,113.385:2.46433,2.46433:0.000415716,0.495034,0.504577
+chr1	7319965	.	TGTTTTGTTTTGTTT	.	.	.	END=7319979;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:32,20,0,3:3,32:2,3:325.88:366.612,131.36:0.0990099,0.0990099:0.0,9.31041e-10,1.0	0/0:38:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.419:326.675,113.385:0.0,0.0:0.0,1.10491e-08,1.0
+chr1	7320026	.	CAACAACAACAA	.	.	.	END=7320037;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:23,25,0,0:4,23:NULL:313.598:366.612,131.36:0.0,0.0:0.0,1.41139e-06,1.0	0/0:45:1.0:4,4:4-4,4-4:35,8,0,2:4,35:3,2:219.811:326.675,113.385:0.0,0.0:0.0,1.13476e-10,1.0
+chr1	7320521	.	TACATACATACA	.	.	.	END=7320532;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999718:3,3:3-3,3-3:15,13,0,4:3,15:2,4:208.139:366.612,131.36:0.0,0.0:0.0,8.72314e-05,0.999917	0/0:24:0.999363:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.282:326.675,113.385:0.0,0.0:0.0,0.000375133,0.999628
+chr1	7321482	.	ACACACACACACAC	.	.	.	END=7321495;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:23,18,0,6:7,23:5,2|6,3|7,1:303.377:366.612,131.36:0.0,0.0:0.0,1.80126e-07,1.0	0/0:36:0.999919:7,7:6-7,6-7:17,16,0,2:7,17:5,1|6,1:226.164:326.675,113.385:0.169767,0.169767:3.24696e-33,4.78734e-05,0.999955
+chr1	7322714	.	CCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTC	.	.	.	END=7322755;RU=cccttc;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.996653:7,7:7-7,7-7:11,11,0,3:7,11:5,1|6,1|7,1:170.747:366.612,131.36:0.0,0.0:3.41976e-34,0.00110666,0.998898	0/0:13:0.961654:7,7:7-11,7-11:9,0,0,3:7,9:3,1|4,2:58.7664:326.675,113.385:1.93776,1.93776:1.54565e-21,0.0115338,0.988493
+chr1	7322758	.	CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	CCCTCCCTCCCTCCCTCCCTCCCTCCCT,CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	.	.	END=7322825;RU=ccct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:20:0.0513381:12,12:7-13,7-13:0,12,0,8:NULL:4,1|5,2|7,1|9,2|10,1|12,1:166.878:366.612,131.36:1.53046,1.53046:1.0,0.0,0.0	1/1:3:0.034616:7,7:4-7,4-7:0,0,0,3:NULL:4,1|5,1|7,1:21.8234:326.675,113.385:1.0297,1.0297:1.0,0.0,0.0
+chr1	7322843	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7322906;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.722905:17,17:17-17,17-17:5,11,0,5:17,5:3,1|8,1|10,1|13,1|15,1:163.352:366.612,131.36:0.0,0.0:5.502e-11,0.0988771,0.901225	0/0:6:0.392285:16,16:16-16,16-16:3,0,0,3:16,3:3,1|5,1|9,1:35.5546:326.675,113.385:0.0,0.0:3.24348e-05,0.308657,0.691323
+chr1	7328752	.	ACCCACCCACCC	.	.	.	END=7328763;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.613872:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6549:366.612,131.36:0.0,0.0:3.22758e-10,0.15496,0.845119	0/0:11:0.757354:3,3:3-3,3-3:5,6,0,0:3,5:NULL:74.6943:326.675,113.385:0.19802,0.19802:2.47669e-12,0.128837,0.871257
+chr1	7336314	.	TTTGTTTGTTTGTTTG	.	.	.	END=7336329;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999524:4,4:4-4,4-4:14,13,0,4:4,14:3,4:202.302:366.612,131.36:0.0,0.0:0.0,0.000197975,0.999804	0/0:42:1.0:4,4:4-4,4-4:23,15,0,4:4,23:3,4:255.565:326.675,113.385:0.0,0.0:0.0,3.73456e-07,1.0
+chr1	7336498	.	TTGCTTGCTTGC	.	.	.	END=7336509;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99571:3,3:3-3,3-3:11,15,0,0:3,11:NULL:182.109:366.612,131.36:0.0,0.0:1.17594e-37,0.00278756,0.997222	0/0:46:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:287.118:326.675,113.385:0.0,0.0:0.0,8.91218e-08,1.0
+chr1	7338572	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7338615;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.421656:26,26:25-27,25-27:5,18,0,10:25,2|26,3:5,2|8,2|11,1|15,1|20,1|21,1|25,1|26,1:269.903:366.612,131.36:0.77215,0.77215:0.0,0.0,1.0	0/0:26:0.775999:22,22:15-23,15-23:9,13,0,2:21,2|22,7:8,1|18,1:187.222:326.675,113.385:3.54718,3.54718:4.10557e-09,0.194642,0.805411
+chr1	7338650	.	GAGAGAGAGAGA	.	.	.	END=7338661;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:199.444:366.612,131.36:0.0,0.0:0.0,7.39755e-06,0.999994	0/0:31:0.677083:6,6:5-6,5-6:16,15,0,0:5,2|6,14:NULL:213.658:326.675,113.385:0.481803,0.481803:3.46657e-31,0.322893,0.677118
+chr1	7339588	.	GGAGGGAGGGAG	.	.	.	END=7339599;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:20,15,0,6:3,20:2,6:258.753:366.612,131.36:0.0,0.0:0.0,1.87913e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.179:326.675,113.385:0.0,0.0:0.0,1.76217e-07,1.0
+chr1	7342098	.	CTTCCTTCCTTC	.	.	.	END=7342109;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:239.784:366.612,131.36:0.0,0.0:0.0,1.00833e-05,0.999993	0/0:27:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:140.672:326.675,113.385:0.0,0.0:0.0,3.06032e-06,1.0
+chr1	7346787	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7346820;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.835079:15,15:15-16,15-16:15,9,0,4:14,2|15,11|16,2:8,1|11,1|13,1|14,1:187.666:366.612,131.36:0.478127,0.478127:0.998868,0.00113628,2.39974e-18	0/2:40:0.820877:17,18:17-17,17-18:14,14,0,11:17,11|18,3:6,1|8,1|9,1|10,1|12,4|16,3:286.675:326.675,113.385:0.0,0.51751:2.57552e-17,0.000174086,0.999827
+chr1	7348276	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	.	END=7348327;RU=ctcc;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.301025:13,13:10-13,10-13:2,18,0,11:13,2:2,1|3,2|5,2|6,2|7,1|11,2|12,1:255.873:366.612,131.36:0.744223,0.744223:4.55782e-05,0.480577,0.519467	0/0:21:0.299182:13,13:6-13,6-13:3,7,0,10:13,3:2,2|4,2|5,1|6,1|7,1|9,3:147.626:326.675,113.385:3.34451,3.34451:3.97709e-07,0.52238,0.477716
+chr1	7358397	.	GAACGAACGAAC	.	.	.	END=7358408;RU=gaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:19,21,0,2:3,19:2,2:283.523:366.612,131.36:0.0,0.0:0.0,7.11925e-06,0.999994	0/0:36:0.999979:3,3:2-3,2-3:18,17,0,0:3,18:NULL:228.634:326.675,113.385:0.382696,0.382696:0.0,2.71399e-05,0.999972
+chr1	7358417	.	GGAGGGAGGGAG	.	.	.	END=7358428;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999972:3,3:3-3,3-3:18,22,0,0:3,18:NULL:271.15:366.612,131.36:0.0,0.0:0.0,2.61653e-05,0.999978	0/0:36:0.999992:3,3:3-3,3-3:18,15,0,3:3,18:2,3:231.967:326.675,113.385:0.0,0.0:0.0,1.52545e-05,0.999986
+chr1	7358698	.	GTGTGTGTGTGTGT	.	.	.	END=7358711;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999251:7,7:6-7,6-7:14,24,0,2:7,14:5,1|6,1:292.536:366.612,131.36:0.253975,0.253975:2.38892e-31,0.000399694,0.999605	0/0:42:1.0:7,7:7-7,7-7:20,19,0,3:7,20:5,3:276.71:326.675,113.385:0.0,0.0:3.9e-44,6.48288e-06,0.999995
+chr1	7360103	.	GCTGGCTGGCTG	.	.	.	END=7360114;RU=gctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:145.701:366.612,131.36:0.0,0.0:0.0,1.49409e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:20,19,0,2:3,20:2,2:266.982:326.675,113.385:0.0,0.0:0.0,8.91998e-06,0.999994
+chr1	7364232	.	AACAACAACAACAACAACAACAACAAC	.	.	.	END=7364258;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.99988:9,9:9-9,9-9:16,18,0,8:9,16:4,2|5,3|6,1|7,1|8,1:294.402:366.612,131.36:0.0,0.0:1e-45,8.34886e-05,0.999918	0/0:37:0.998618:9,9:4-9,4-9:23,4,0,9:8,2|9,21:4,2|5,3|7,1|8,3:207.845:326.675,113.385:1.27865,1.27865:0.0,0.00139733,0.998609
+chr1	7369828	.	TTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGT	.	.	.	END=7369877;RU=ttggt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.988251:10,10:10-10,10-10:9,17,0,11:10,9:3,1|4,2|5,1|6,3|7,1|8,1|9,2:267.282:366.612,131.36:0.0990099,0.0990099:4.56816e-24,0.00662809,0.993385	0/0:42:0.983934:10,10:10-10,10-10:10,17,0,15:10,10:2,1|3,2|4,1|5,4|6,3|8,4:309.264:326.675,113.385:0.0,0.0:4.08607e-26,0.0115998,0.988427
+chr1	7370253	.	TCTATCTATCTATCTATCTATCTATCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7370288;RU=tcta;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999473:9,9:8-9,8-9:15,19,0,5:9,15:2,1|3,1|5,1|7,1|8,1:273.082:366.612,131.36:0.236383,0.236383:8.91454e-31,0.000343567,0.999659	1/1:32:0.987571:10,10:9-10,9-10:10,15,0,6:10,10:3,2|6,1|9,3:229.725:326.675,113.385:0.382696,0.382696:0.0,0.00361669,0.996391
+chr1	7372684	.	GTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7372697;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.992972:7,7:7-7,7-7:11,7,0,0:7,11:NULL:109.451:366.612,131.36:0.0,0.0:1.69996e-23,0.00378935,0.996218	0/1:26:0.275371:7,17:7-7,6-17:20,4,0,2:6,2|7,18:5,1|17,1:155.27:326.675,113.385:0.0,4.95623:4.12548e-36,0.000283499,0.99972
+chr1	7373113	.	AATAATAATAAT	.	.	.	END=7373124;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99978:4,4:4-4,4-4:15,9,0,2:4,15:3,2:162.12:366.612,131.36:0.0,0.0:7.85066e-39,9.29249e-05,0.99991	0/0:20:0.999906:4,4:4-4,4-4:17,3,0,0:4,17:NULL:97.0953:326.675,113.385:0.0,0.0:1.44e-43,6.04494e-05,0.999941
+chr1	7374196	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7374220;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:21,10,0,6:5,21:2,1|4,5:216.13:366.612,131.36:0.0,0.0:0.0,7.71321e-07,1.0	0/0:40:1.0:5,5:5-5,5-5:29,5,0,6:5,29:4,6:207.505:326.675,113.385:0.0,0.0:0.0,5.08972e-09,1.0
+chr1	7375130	.	AAGAAGAAGAAG	.	.	.	END=7375141;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:23,17,0,0:4,23:NULL:243.004:366.612,131.36:0.0,0.0:0.0,1.47844e-06,1.0	0/0:27:0.999994:4,4:3-4,3-4:19,7,0,0:4,19:NULL:139.553:326.675,113.385:0.236383,0.236383:0.0,1.34472e-05,0.999987
+chr1	7377589	.	GTGTGTGTGTGT	.	.	.	END=7377600;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.00001:6,6:6-6,6-6:22,23,0,0:6,22:NULL:305.402:366.612,131.36:0.0,0.0:0.0,2.00292e-06,1.0	0/0:33:0.999991:6,6:6-6,6-6:18,13,0,2:6,18:5,2:200.378:326.675,113.385:0.0,0.0:1e-45,1.50686e-05,0.999986
+chr1	7378672	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7378691;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:5,5:5-5,5-5:22,17,0,2:5,22:3,1|4,1:259.382:366.612,131.36:0.0,0.0:0.0,1.4993e-06,1.0	0/0:27:0.999944:5,5:5-5,5-5:17,7,0,3:5,17:3,1|4,2:158.67:326.675,113.385:0.0,0.0:0.0,2.59651e-05,0.999978
+chr1	7379008	.	GTGTGTGTGTGT	GTGTGTGTGT	.	.	END=7379019;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:1.0:5,6:5-5,6-6:21,15,0,0:4,2|5,11|6,8:NULL:244.131:366.612,131.36:0.0990099,0.220506:2.68448e-10,1.0,1.29073e-16	0/0:37:0.997376:6,6:2-6,2-6:22,11,0,2:5,2|6,20:4,1|5,1:210.677:326.675,113.385:1.55789,1.55789:2.05557e-35,0.00263789,0.997368
+chr1	7379032	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACA	.	.	END=7379059;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999806:13,13:13-13,13-13:25,16,0,5:12,3|13,22:8,3|10,1|11,1:304.336:366.612,131.36:0.0,0.0:1.0,1.76595e-06,4.13362e-22	0/0:39:0.999089:14,14:10-14,10-14:22,10,0,6:13,3|14,19:6,1|7,1|8,1|10,2|11,1:238.742:326.675,113.385:1.24776,1.24776:1.8e-21,0.000919131,0.999082
+chr1	7382087	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7382106;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.996054:4,4:4-4,4-4:10,24,0,3:4,10:3,3:276.813:366.612,131.36:0.0,0.0:1.88766e-33,0.00203106,0.997974	0/0:19:0.993888:4,4:4-4,4-4:11,8,0,0:4,11:NULL:112.713:326.675,113.385:0.0,0.0:4.26474e-36,0.00449055,0.995522
+chr1	7384157	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=7384198;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:66:0.746841:22,23:22-22,21-23:13,30,0,22:21,2|22,8|23,3:5,1|6,1|7,1|9,1|10,2|11,1|14,2|15,2|16,4|18,2|20,2|21,1|22,2:518.97:366.612,131.36:0.139319,0.664031:3.11801e-38,7.10975e-05,0.999932	0/1:53:0.746418:21,22:21-21,21-22:16,17,0,18:21,12|22,4:5,1|6,2|9,1|10,1|11,1|12,2|13,3|14,1|16,2|18,2|20,2:378.127:326.675,113.385:0.0,0.538126:1.12812e-15,9.63829e-05,0.999903
+chr1	7385475	.	CAACAACAACAA	.	.	.	END=7385486;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:29,17,0,3:4,29:4,3:300.122:366.612,131.36:0.0,0.0:0.0,1.86986e-09,1.0	0/0:31:0.99995:4,4:4-5,4-5:17,8,0,5:4,17:3,3|4,2:177.236:326.675,113.385:0.412766,0.412766:0.0,6.88485e-06,0.999994
+chr1	7385514	.	AAAACAAAACAAAAC	.	.	.	END=7385528;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:27,17,0,0:3,27:NULL:267.996:366.612,131.36:0.0,0.0:0.0,6.51147e-08,1.0	0/0:28:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:141.849:326.675,113.385:0.0,0.0:0.0,1.66293e-06,1.0
+chr1	7385949	.	ACAAAACAAAACAAAACAAA	.	.	.	END=7385968;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.998894:4,4:4-4,4-4:15,16,0,0:4,15:NULL:215.301:366.612,131.36:0.0,0.0:0.0,0.000847047,0.999157	0/0:29:1.0:4,4:4-4,4-4:21,8,0,0:4,21:NULL:161.162:326.675,113.385:0.0,0.0:0.0,5.3986e-06,0.999995
+chr1	7386148	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7386177;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.45196:15,27:15-15,15-27:19,14,0,10:14,3|15,16:4,2|8,2|9,1|10,2|11,1|14,1|27,1:319.729:366.612,131.36:0.0,5.81499:1.70628e-20,6.75452e-05,0.999933	0/0:31:0.990378:15,15:15-15,15-15:11,9,0,10:15,11:4,2|8,1|9,1|10,1|12,1|13,3|14,1:210.515:326.675,113.385:0.139319,0.139319:1.95257e-14,0.00320105,0.996807
+chr1	7389238	.	AAAACAAAACAAAAC	.	.	.	END=7389252;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999582:3,3:3-3,3-3:14,21,0,3:3,14:2,3:266.595:366.612,131.36:0.0,0.0:0.0,0.000228812,0.999773	0/0:20:0.996706:3,3:3-3,3-3:11,6,0,3:3,11:2,3:117.808:326.675,113.385:0.0,0.0:3.58095e-38,0.00114915,0.998854
+chr1	7389561	.	AACAACAACAAC	.	.	.	END=7389572;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.986302:4,4:4-4,4-4:10,16,0,0:4,10:NULL:184.473:366.612,131.36:0.0,0.0:3.2027e-33,0.00898798,0.991031	0/0:8:0.572521:4,4:4-4,4-4:4,4,0,0:4,4:NULL:50.0009:326.675,113.385:0.29703,0.29703:1.07314e-13,0.254933,0.745076
+chr1	7390007	.	ACACACACACAC	.	.	.	END=7390018;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:28,8,0,4:6,28:4,2|5,2:213.884:366.612,131.36:0.0,0.0:0.0,1.5855e-08,1.0	0/0:12:0.956369:6,6:6-6,6-6:8,4,0,0:6,8:NULL:64.5737:326.675,113.385:0.0,0.0:3.70441e-17,0.0228166,0.97723
+chr1	7390525	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7390544;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:23,13,0,2:4,23:3,2:218.835:366.612,131.36:0.0,0.0:0.0,4.33981e-07,1.0	0/0:19:0.998138:4,4:4-4,4-4:12,5,0,2:4,12:3,2:102.812:326.675,113.385:0.0,0.0:4.38078e-36,0.000734944,0.99927
+chr1	7391902	.	AAACAAACAAAC	.	.	.	END=7391913;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.95787:3,3:3-3,3-3:8,9,0,0:3,8:NULL:117.574:366.612,131.36:0.0,0.0:1.6678e-25,0.0217778,0.978265	0/0:9:0.454772:3,3:1-3,1-3:3,6,0,0:3,3:NULL:64.9642:326.675,113.385:0.390054,0.390054:2.83571e-10,0.286577,0.713424
+chr1	7392178	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=7392205;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.989337:13,13:13-15,13-15:18,15,0,5:13,16|14,2:7,1|8,1|9,1|11,1|12,1:258.558:366.612,131.36:0.655861,0.655861:0.989359,0.0106623,1.70261e-14	0/0:32:0.745438:14,14:13-14,13-14:14,12,0,6:13,3|14,11:5,1|6,1|9,1|10,2|11,1:220.514:326.675,113.385:0.469019,0.469019:1.61047e-11,0.254054,0.745954
+chr1	7392363	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7392394;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.990618:8,8:8-8,8-8:12,12,0,2:8,12:3,1|6,1:179.708:366.612,131.36:0.0,0.0:9.96931e-33,0.00644949,0.993565	0/1:30:0.293661:8,12:8-8,8-12:18,6,0,6:8,18:4,1|7,3|8,1|11,1:185.442:326.675,113.385:0.0,1.79249:0.0,1.26003e-08,1.0
+chr1	7393303	.	TAAATAAATAAATAAA	.	.	.	END=7393318;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.945166:4,4:4-4,4-4:9,14,0,0:4,9:NULL:164.952:366.612,131.36:0.0,0.0:8.62914e-26,0.0447158,0.955357	0/0:5:0.572755:4,4:4-4,4-4:4,1,0,0:4,4:NULL:24.6243:326.675,113.385:0.0,0.0:2.61914e-12,0.227011,0.773022
+chr1	7395935	.	TATATTATATTATAT	.	.	.	END=7395949;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.987288:3,3:3-3,3-3:9,6,0,2:3,9:2,2:104.632:366.612,131.36:0.0,0.0:1.594e-26,0.00461756,0.995394	0/0:12:0.990461:3,3:3-3,3-3:10,2,0,0:3,10:NULL:56.8744:326.675,113.385:0.0,0.0:3.51705e-29,0.00420052,0.995809
+chr1	7397361	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7397400;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:38:0.731255:21,22:21-23,21-23:8,16,0,12:21,6|22,2:4,1|6,1|7,1|8,2|9,2|10,1|17,1|19,2|20,1:279.421:366.612,131.36:0.382183,0.782491:3.14671e-23,0.00209191,0.997913	0/0:29:0.904946:20,20:19-21,19-21:7,10,0,10:20,7:6,1|7,1|8,1|9,2|18,4|19,1:201.872:326.675,113.385:0.424474,0.424474:6.32146e-09,0.0305788,0.969479
+chr1	7398005	.	CCCGCCCGCCCG	.	.	.	END=7398016;RU=cccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:23,13,0,0:3,23:NULL:211.852:366.612,131.36:0.0,0.0:0.0,8.05988e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.369:326.675,113.385:0.0,0.0:0.0,3.3594e-07,1.0
+chr1	7399995	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=7400022;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.99992:7,7:7-7,7-7:17,18,0,2:7,17:4,1|6,1:252.317:366.612,131.36:0.0,0.0:8.398e-42,6.27518e-05,0.99994	0/0:29:0.999872:7,7:2-7,2-7:16,7,0,5:7,16:2,1|3,1|4,1|6,2:168.405:326.675,113.385:2.26211,2.26211:6.47696e-40,7.5926e-05,0.999926
+chr1	7400995	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7401018;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999799:6,6:5-6,5-6:15,15,0,5:6,15:3,1|4,2|5,2:236.311:366.612,131.36:0.284901,0.284901:1.1652e-41,9.16741e-05,0.99991	0/0:53:1.0:6,6:6-6,6-6:26,16,0,11:6,26:2,1|3,5|4,3|5,2:331.38:326.675,113.385:0.0,0.0:0.0,5.8558e-08,1.0
+chr1	7401260	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7401291;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.999134:15,15:15-15,15-15:25,13,0,7:14,3|15,20|16,2:4,1|7,1|9,2|11,1|12,1|13,1:297.301:366.612,131.36:0.139319,0.139319:0.99925,0.000751175,7.51773e-16	0/0:55:1.0:16,16:16-16,16-16:31,17,0,6:15,3|16,28:7,1|11,2|12,1|13,1|15,1:351.031:326.675,113.385:0.0,0.0:5.42445e-32,1.93846e-06,1.0
+chr1	7403154	.	ATTTATTTATTT	.	.	.	END=7403165;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:30,18,0,0:3,30:NULL:285.884:366.612,131.36:0.0,0.0:0.0,6.03542e-09,1.0	0/0:30:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:138.461:326.675,113.385:0.0,0.0:0.0,7.52932e-08,1.0
+chr1	7403493	.	ACACACACACACACAC	.	.	.	END=7403508;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:8,8:8-8,8-8:23,21,0,5:8,23:4,1|5,1|6,1|7,2:333.163:366.612,131.36:0.0,0.0:1.72e-43,7.76178e-07,1.0	0/0:33:0.99689:8,8:8-9,8-9:12,16,0,4:8,12:5,2|6,2:226.827:326.675,113.385:0.334882,0.334882:4.59965e-23,0.0016035,0.998404
+chr1	7403509	.	CCACCACCACCACCACCACCA	.	.	.	END=7403529;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:7,7:7-7,7-7:21,19,0,0:7,21:NULL:268.328:366.612,131.36:0.0,0.0:0.0,1.092e-05,0.999993	0/0:31:0.99736:7,7:7-7,7-7:12,15,0,4:7,12:4,2|5,2:216.079:326.675,113.385:0.0,0.0:2.04253e-36,0.00152758,0.998475
+chr1	7403538	.	AAATAAATAAAT	.	.	.	END=7403549;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:279.211:366.612,131.36:0.0,0.0:0.0,1.52631e-06,1.0	0/0:26:0.999353:3,3:3-3,3-3:14,12,0,0:3,14:NULL:167.036:326.675,113.385:0.0,0.0:1.7057e-41,0.000411744,0.999591
+chr1	7407348	.	TAATAATAATAATAATAA	.	.	.	END=7407365;RU=taa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:6,6:6-6,6-6:27,20,0,0:6,27:NULL:286.472:366.612,131.36:0.0,0.0:0.0,8.2752e-08,1.0	0/0:36:0.999988:6,6:5-6,5-6:18,12,0,5:6,18:4,2|5,3:225.568:326.675,113.385:0.195027,0.195027:1.25e-43,9.64497e-06,0.999993
+chr1	7407486	.	TATATATATATA	.	.	.	END=7407497;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999744:6,6:6-6,6-6:16,11,0,0:6,16:NULL:166.769:366.612,131.36:0.0,0.0:4.11278e-28,0.000193897,0.99981	0/0:23:0.987407:6,6:6-6,6-6:10,13,0,0:6,10:NULL:161.381:326.675,113.385:0.0,0.0:6.72984e-18,0.00804479,0.991974
+chr1	7407553	.	ACACACACACAC	.	.	.	END=7407564;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:6,6:6-6,6-6:23,9,0,2:6,23:5,2:189.028:366.612,131.36:0.0,0.0:0.0,4.76762e-07,1.0	0/0:33:1.0:6,6:6-6,6-6:25,7,0,0:6,25:NULL:165.558:326.675,113.385:0.0,0.0:0.0,1.80849e-07,1.0
+chr1	7409238	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7409277;RU=aaaac;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999948:8,8:8-8,8-8:17,13,0,13:8,17:3,1|4,4|5,1|6,2|7,5:276.522:366.612,131.36:0.0,0.0:1.2e-43,2.10434e-05,0.999979	0/0:21:0.982309:8,8:7-8,7-8:9,3,0,8:8,9:3,1|4,3|6,1|7,3:120.301:326.675,113.385:0.45695,0.45695:1.97341e-23,0.00575558,0.994257
+chr1	7410953	.	AGAAGAAGAAGA	.	.	.	END=7410964;RU=aga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997912:4,4:4-4,4-4:13,15,0,0:4,13:NULL:186.244:366.612,131.36:0.0,0.0:5.88746e-31,0.00152302,0.998481	0/0:29:0.998108:4,4:4-4,4-4:13,16,0,0:4,13:NULL:196.156:326.675,113.385:0.0,0.0:4.49557e-31,0.00144172,0.998564
+chr1	7416243	.	ATTTATTTATTT	.	.	.	END=7416254;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:216.436:366.612,131.36:0.0,0.0:0.0,1.14461e-06,1.0	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.715:326.675,113.385:0.0,0.0:0.0,4.6248e-07,1.0
+chr1	7421873	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7421914;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.998197:21,21:21-23,21-23:14,18,0,11:21,14:6,1|7,3|12,2|15,1|19,2|20,2:324.695:366.612,131.36:0.670934,0.670934:5.09017e-16,0.000522917,0.999478	0/0:38:0.686723:21,21:20-22,20-22:5,16,0,15:21,5:4,1|8,1|9,1|10,2|11,1|14,2|15,1|16,1|17,1|18,1|19,1|20,2:290.947:326.675,113.385:0.626507,0.626507:4.14178e-06,0.120716,0.879379
+chr1	7423553	.	TGGGTTGGGTTGGGT	.	.	.	END=7423567;RU=tgggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:28,13,0,2:3,28:2,1|3,1:245.609:366.612,131.36:0.0,0.0:0.0,6.4823e-09,1.0	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.697:326.675,113.385:0.0,0.0:0.0,2.56633e-06,1.0
+chr1	7423835	.	CCAGCCAGCCAG	.	.	.	END=7423846;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998069:3,3:3-3,3-3:12,18,0,0:3,12:NULL:213.338:366.612,131.36:0.0,0.0:2.9623e-41,0.00101561,0.99899	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.014:326.675,113.385:0.0,0.0:0.0,8.03606e-06,0.999994
+chr1	7424052	.	ATATATATATATAT	.	.	.	END=7424065;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.982641:7,7:6-8,6-8:10,7,0,0:7,10:NULL:108.711:366.612,131.36:0.466294,0.466294:2.7639e-16,0.0114908,0.988532	0/0:25:0.998037:7,7:6-8,6-8:13,10,0,0:7,13:NULL:137.626:326.675,113.385:0.344122,0.344122:1.78319e-21,0.00109507,0.998907
+chr1	7425278	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7425323;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.94803:23,23:21-24,21-24:9,16,0,16:23,9:8,1|9,2|10,2|11,1|12,1|13,1|15,1|17,2|20,1|21,1|22,3:322.991:366.612,131.36:0.570833,0.570833:8.83532e-11,0.0119463,0.988078	0/0:63:0.513251:23,23:21-27,21-27:20,24,0,18:21,3|22,4|23,11|24,2:5,4|9,1|10,1|11,3|14,2|15,4|19,1|20,2:473.466:326.675,113.385:1.61365,1.61365:3.31356e-10,0.476846,0.523247
+chr1	7426578	.	TCTTTCTTTCTT	.	.	.	END=7426589;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999873:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.935:366.612,131.36:0.0,0.0:0.0,7.34154e-05,0.999926	0/0:12:0.924749:3,3:3-3,3-3:7,5,0,0:3,7:NULL:72.4247:326.675,113.385:0.0,0.0:1.24085e-20,0.0349296,0.965131
+chr1	7426730	.	TATATATATATATATATATATATATATATATATATATATATATATATA	TA	.	.	END=7426777;RU=ta;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0256329:1,1:1-1,1-1:0,14,0,0:NULL:NULL:123.961:366.612,131.36:0.0,0.0:0.866772,0.131153,0.00217551	1/1:4:0.00195412:1,1:1-1,1-1:0,4,0,0:NULL:NULL:34.6221:326.675,113.385:0.0,0.0:0.371713,0.539518,0.0888731
+chr1	7431725	.	ATTATTATTATT	.	.	.	END=7431736;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999499:4,4:4-4,4-4:14,11,0,4:4,14:3,4:187.286:366.612,131.36:0.0,0.0:7.8315e-37,0.000191455,0.999811	0/0:35:1.0:4,4:4-4,4-4:26,9,0,0:4,26:NULL:183.414:326.675,113.385:0.0,0.0:0.0,1.08437e-07,1.0
+chr1	7440876	.	TTCCTTCCTTCC	.	.	.	END=7440887;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:213.709:366.612,131.36:0.0,0.0:0.0,4.1056e-09,1.0	0/0:40:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:249.022:326.675,113.385:0.0,0.0:0.0,1.88782e-06,1.0
+chr1	7440950	.	AAACAAACAAAC	.	.	.	END=7440961;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:155.473:366.612,131.36:0.0,0.0:0.0,7.67418e-08,1.0	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:221.718:326.675,113.385:0.0,0.0:0.0,7.89085e-06,0.999994
+chr1	7444083	.	ATATATATATATAT	.	.	.	END=7444096;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.515785:7,7:6-8,6-8:4,9,0,0:7,4:NULL:101.366:366.612,131.36:0.820887,0.820887:1.31889e-07,0.297634,0.702376	0/0:10:0.952448:7,7:7-7,7-7:8,2,0,0:7,8:NULL:49.8835:326.675,113.385:0.0,0.0:2.21982e-14,0.0249351,0.975111
+chr1	7447332	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7447355;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:6,6:6-6,6-6:29,25,0,5:6,29:3,4|4,1:381.561:366.612,131.36:0.0,0.0:0.0,1.29042e-08,1.0	0/0:39:1.0:6,6:6-6,6-6:27,7,0,5:6,27:2,2|3,1|4,1|5,1:210.645:326.675,113.385:0.0,0.0:0.0,4.00341e-08,1.0
+chr1	7449579	.	TCTGTCTCTGTCTCTGTCTCTGTC	.	.	.	END=7449602;RU=tctgtc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:323.571:366.612,131.36:0.0,0.0:0.0,7.14102e-07,1.0	0/0:29:0.999342:4,4:3-4,3-4:15,13,0,0:4,15:NULL:180.716:326.675,113.385:0.311527,0.311527:6e-45,0.000577142,0.999424
+chr1	7450712	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7450769;RU=tc;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.325423:26,26:10-26,10-26:6,14,0,10:25,2|26,4:6,1|8,2|9,1|12,1|15,2|17,2|18,1:238.154:366.612,131.36:6.80582,6.80582:0.989552,0.0104685,2.18193e-10	2/2:20:0.0285637:32,32:25-32,25-32:0,7,0,9:NULL:4,2|5,1|8,1|13,1|27,2|28,1|32,1:141.607:326.675,113.385:1.50058,1.50058:9.70053e-09,0.34967,0.650364
+chr1	7453756	.	AGCAGCAGCAGC	.	.	.	END=7453767;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:286.722:366.612,131.36:0.0,0.0:0.0,3.87272e-09,1.0	0/0:44:1.0:4,4:4-4,4-4:27,17,0,0:4,27:NULL:265.752:326.675,113.385:0.0,0.0:0.0,1.23179e-07,1.0
+chr1	7456598	.	TTTATTTATTTA	.	.	.	END=7456609;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:269.69:366.612,131.36:0.0,0.0:0.0,2.51275e-07,1.0	0/0:34:0.999931:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.423:326.675,113.385:0.0,0.0:0.0,6.4736e-05,0.999939
+chr1	7460799	.	ATTTATTTATTT	.	.	.	END=7460810;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:37,23,0,0:3,37:NULL:352.908:366.612,131.36:0.0,0.0:0.0,7.23043e-11,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.937:326.675,113.385:0.0,0.0:0.0,6.82864e-07,1.0
+chr1	7461208	.	CACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACA	.	.	END=7461233;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:69:0.902457:19,19:6-20,6-20:21,29,0,18:16,2|18,3|19,14|20,2:5,1|7,1|8,2|11,3|14,2|16,4|17,4|18,1:531.308:366.612,131.36:4.86734,4.86734:0.0,2.49675e-08,1.0	0/0:62:0.99988:13,13:4-13,4-13:29,18,0,13:12,4|13,25:5,1|6,2|7,1|8,1|9,2|10,3|11,1|12,1|13,1:406.177:326.675,113.385:2.43794,2.43794:8.67065e-38,0.000120026,0.99988
+chr1	7466892	.	TAAATAAATAAA	.	.	.	END=7466903;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:20,10,0,3:3,20:2,2|3,1:193.314:366.612,131.36:0.0,0.0:0.0,2.12392e-06,1.0	0/0:24:0.999881:3,3:3-3,3-3:16,8,0,0:3,16:NULL:134.134:326.675,113.385:0.0,0.0:0.0,7.06065e-05,0.999933
+chr1	7466980	.	AAAGTTTAAAGTTTAAAGTTT	.	.	.	END=7467000;RU=aaagttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:230.609:366.612,131.36:0.0,0.0:0.0,5.97646e-06,0.999995	0/0:19:0.999723:3,3:3-3,3-3:15,4,0,0:3,15:NULL:96.7021:326.675,113.385:0.0,0.0:0.0,0.000150997,0.99985
+chr1	7468038	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC,TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=7468113;RU=tttc;PERIOD=4;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.0273217:21,21:17-23,17-23:0,12,0,15:NULL:3,2|4,1|5,1|8,1|9,2|10,3|13,1|15,2|19,1|21,1:217.9:366.612,131.36:2.02262,2.02262:5.75985e-16,0.383764,0.616294	1/1:25:0.020238:16,16:7-19,7-19:0,7,0,13:NULL:7,2|10,1|11,2|12,5|13,1|14,1|16,1:158.469:326.675,113.385:3.56232,3.56232:0.312801,0.5122,0.175013
+chr1	7468830	.	AAAACAAAACAAAAC	.	.	.	END=7468844;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999744:3,3:3-3,3-3:15,16,0,2:3,15:2,2:222.579:366.612,131.36:0.0,0.0:0.0,0.00017591,0.999826	0/0:24:0.999755:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.313:326.675,113.385:0.0,0.0:0.0,0.00016387,0.999841
+chr1	7469326	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7469375;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:53:0.532474:25,30:19-27,19-31:10,24,0,17:19,2|25,6|27,2:4,1|7,2|8,2|9,3|12,1|13,1|16,1|18,1|19,1|22,1|26,2|30,1:423.149:366.612,131.36:1.50195,2.63117:3.63299e-29,2.26825e-07,1.0	0/0:50:0.984792:25,25:20-27,20-27:11,23,0,12:25,11:6,2|7,2|9,1|13,1|14,2|18,1|19,2|25,1:366.528:326.675,113.385:1.77125,1.77125:1.29155e-26,0.00944488,0.990575
+chr1	7469376	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7469415;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.287036:16,19:16-16,16-19:7,20,0,17:16,7:4,1|6,2|8,2|9,1|10,4|11,1|15,5|18,1:349.347:366.612,131.36:0.19802,1.12645:0.566,0.434096,8.58628e-15	0/0:52:0.920153:20,20:20-20,20-20:7,24,0,21:20,7:5,2|6,1|7,4|8,1|9,1|10,1|11,2|12,2|14,2|15,2|16,1|18,1|19,1:420.393:326.675,113.385:0.0,0.0:4.29867e-09,0.0449381,0.955134
+chr1	7473898	.	AAACAAACAAAC	.	.	.	END=7473909;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.259:366.612,131.36:0.0,0.0:0.0,7.52061e-07,1.0	0/0:25:0.999257:3,3:3-3,3-3:14,11,0,0:3,14:NULL:154.952:326.675,113.385:0.0,0.0:9.73e-43,0.000477853,0.999523
+chr1	7475210	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=7475227;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.878:366.612,131.36:0.0,0.0:0.0,1.86616e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:177.338:326.675,113.385:0.0,0.0:0.0,3.60068e-07,1.0
+chr1	7475765	.	TATTATTATTAT	.	.	.	END=7475776;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.997794:4,4:4-4,4-4:12,15,0,0:4,12:NULL:188.056:366.612,131.36:0.0,0.0:1.78865e-40,0.00138378,0.998619	0/0:17:0.993907:4,4:4-4,4-4:11,6,0,0:4,11:NULL:98.0058:326.675,113.385:0.0,0.0:7.5814e-37,0.00390186,0.99611
+chr1	7482108	.	TTTTTTGTTTTTTGTTTTTTGTTTTTTG	TTTTTTGTTTTTTGTTTTTTG	.	.	END=7482135;RU=ttttttg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.0593018:3,3:3-3,3-3:0,0,0,4:NULL:3,4:26.8546:366.612,131.36:0.0,0.0:0.0740912,0.397935,0.528156	0/0:25:0.999114:4,4:4-4,4-4:13,7,0,5:4,13:2,1|3,4:149.54:326.675,113.385:0.0,0.0:3.87466e-38,0.000414173,0.99959
+chr1	7482227	.	ACCCACCCACCC	.	.	.	END=7482238;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.783895:3,3:3-3,3-3:5,14,0,0:3,5:NULL:136.395:366.612,131.36:0.0,0.0:3.03597e-14,0.117362,0.882742	0/0:26:0.951091:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.78:326.675,113.385:0.19802,0.19802:4.98595e-22,0.0337134,0.966351
+chr1	7492065	.	GGAGGGAGGGAG	.	.	.	END=7492076;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:214.218:366.612,131.36:0.0,0.0:0.0,4.3342e-07,1.0	0/0:30:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:154.508:326.675,113.385:0.0,0.0:0.0,5.77157e-07,1.0
+chr1	7493936	.	TAAATAAATAAATAAA	.	.	.	END=7493951;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:189.401:366.612,131.36:0.0,0.0:0.0,4.13945e-07,1.0	0/0:23:0.999022:4,4:4-4,4-4:13,6,0,4:4,13:3,4:131.793:326.675,113.385:0.0,0.0:1.34938e-38,0.000363209,0.999637
+chr1	7495072	.	AAAATAAAATAAAAT	.	.	.	END=7495086;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999951:3,3:3-3,3-3:18,22,0,0:3,18:NULL:271.354:366.612,131.36:0.0,0.0:0.0,4.36311e-05,0.999957	0/0:35:0.999969:3,3:3-3,3-3:18,17,0,0:3,18:NULL:232.209:326.675,113.385:0.0,0.0:0.0,3.56805e-05,0.999964
+chr1	7497345	.	CAAACAAACAAA	.	.	.	END=7497356;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,22,0,0:3,24:NULL:292.966:366.612,131.36:0.0,0.0:0.0,5.38177e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.094:326.675,113.385:0.0,0.0:0.0,2.8124e-06,1.0
+chr1	7500168	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=7500193;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:17:0.59259:13,14:12-14,12-14:5,11,0,0:13,2|14,3:NULL:130.067:366.612,131.36:0.742244,0.868696:1.86284e-05,0.116728,0.88336	1/2:16:0.419391:12,14:12-13,12-14:9,7,0,0:12,3|13,3|14,3:NULL:116.493:326.675,113.385:0.538126,0.588255:0.000815859,0.579807,0.419465
+chr1	7502120	.	ACACACACACACAC	.	.	.	END=7502133;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:75:1.0:7,7:7-7,7-7:41,30,0,3:7,39|8,2:4,1|5,1|6,1:478.922:366.612,131.36:0.0,0.0:0.0,6.18289e-12,1.0	0/0:50:0.999841:7,7:6-7,6-7:28,19,0,3:6,3|7,25:4,1|5,2:329.444:326.675,113.385:0.253975,0.253975:0.0,0.000161628,0.999841
+chr1	7507479	.	TTTTAAATTTTAAATTTTAAA	.	.	.	END=7507499;RU=ttttaaa;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999978:3,3:3-3,3-3:18,10,0,0:3,18:NULL:168.716:366.612,131.36:0.0,0.0:0.0,2.90937e-05,0.999972	0/0:22:0.997651:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.947:326.675,113.385:0.0,0.0:1.18906e-35,0.00174143,0.998262
+chr1	7512509	.	TAAATAAATAAA	.	.	.	END=7512520;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998885:3,3:3-3,3-3:13,13,0,0:3,13:NULL:173.123:366.612,131.36:0.0,0.0:3.62e-43,0.00064395,0.999361	0/0:18:0.995942:3,3:3-3,3-3:11,7,0,0:3,11:NULL:105.003:326.675,113.385:0.0,0.0:1.63034e-36,0.00216985,0.997837
+chr1	7518438	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7518481;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.889935:19,19:19-19,19-19:7,6,0,11:19,7:7,2|8,3|12,1|13,1|18,4:174.41:366.612,131.36:0.0,0.0:0.985099,0.0149306,8.37e-15	0/0:34:0.769607:22,22:21-22,21-22:9,11,0,14:21,2|22,7:5,2|6,1|7,1|11,2|12,1|13,2|14,1|15,2|16,2:254.253:326.675,113.385:0.398507,0.398507:6.15149e-07,0.210266,0.789782
+chr1	7520010	.	TGTGTGTGTGTGTG	TGTGTGTGTGTG	.	.	END=7520023;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:38:1.0:6,7:6-6,7-7:19,18,0,0:6,8|7,11:NULL:255.836:366.612,131.36:0.0,0.0:3.15511e-09,1.0,1.36487e-11	0/0:36:1.0:7,7:7-7,7-7:28,8,0,0:7,28:NULL:187.502:326.675,113.385:0.0,0.0:4.34125e-35,6.38469e-08,1.0
+chr1	7520572	.	AAACAAAACAAAACA	.	.	.	END=7520586;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999963:3,3:3-3,3-3:18,10,0,0:3,18:NULL:166.883:366.612,131.36:0.0,0.0:0.0,3.36053e-05,0.99997	0/0:31:1.0:3,3:3-3,3-3:25,6,0,0:3,25:NULL:150.359:326.675,113.385:0.0,0.0:0.0,1.45848e-07,1.0
+chr1	7522440	.	ATACATACATAC	.	.	.	END=7522451;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.980761:3,3:3-3,3-3:9,10,0,0:3,9:NULL:122.028:366.612,131.36:0.0,0.0:1.1521e-29,0.0106761,0.989349	0/0:20:0.999312:3,3:3-3,3-3:14,6,0,0:3,14:NULL:110.981:326.675,113.385:0.0,0.0:0.0,0.000350902,0.999651
+chr1	7522568	.	TATATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=7522619;RU=ta;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:5:0.0384164:25,25:23-26,23-26:0,4,0,0:NULL:NULL:41.887:366.612,131.36:1.03142,1.03142:0.310425,0.502293,0.187294	1/1:1:0.020438:23,23:26-26,26-26:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
+chr1	7522982	.	TTCTTTCTTTCTTTCT	.	.	.	END=7522997;RU=ttct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997267:4,4:4-4,4-4:11,10,0,3:4,11:3,3:159.691:366.612,131.36:0.0,0.0:2.07316e-37,0.00102804,0.998975	0/0:29:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:147.627:326.675,113.385:0.0,0.0:0.0,1.34801e-06,1.0
+chr1	7524309	.	TAAAATAAAATAAAATAAAATAAAA	.	.	.	END=7524333;RU=taaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999598:5,5:5-5,5-5:16,20,0,0:5,16:NULL:250.858:366.612,131.36:0.0,0.0:1e-45,0.000380237,0.999621	0/0:23:0.959119:5,5:5-5,5-5:7,11,0,5:5,7:4,5:166.74:326.675,113.385:0.0,0.0:2.65051e-20,0.0202231,0.979819
+chr1	7524638	.	AACAAACAAACAAACAAACA	.	.	.	END=7524657;RU=aaca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.99787:5,5:5-5,5-5:12,5,0,3:5,12:4,3:119.09:366.612,131.36:0.0,0.0:6.85631e-34,0.000774939,0.999227	0/0:40:1.0:5,5:3-5,3-5:24,9,0,6:5,24:3,2|4,4:220.454:326.675,113.385:0.43384,0.43384:0.0,1.91326e-07,1.0
+chr1	7527088	.	TTTTATTTTATTTTA	.	.	.	END=7527102;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999917:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.538:366.612,131.36:0.0,0.0:0.0,5.55056e-05,0.999948	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:198.701:326.675,113.385:0.0,0.0:0.0,6.87673e-06,0.999994
+chr1	7527397	.	AATAAATAAATA	.	.	.	END=7527408;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999312:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.911:366.612,131.36:0.0,0.0:0.0,0.000414194,0.99959	0/0:24:1.0:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.585:326.675,113.385:0.0,0.0:0.0,5.10849e-06,0.999995
+chr1	7532994	.	TCTCTCTCTCTCTCTC	.	.	.	END=7533009;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.998564:8,8:6-8,6-8:25,14,0,4:7,3|8,22:4,2|6,1|7,1:268.724:366.612,131.36:0.479355,0.479355:7.15827e-37,0.00144231,0.998564	0/0:65:1.0:8,8:8-8,8-8:32,24,0,8:8,32:5,3|6,2|7,3:406.392:326.675,113.385:0.0,0.0:0.0,1.17275e-09,1.0
+chr1	7538575	.	TTAATTAATTAATTAA	.	.	.	END=7538590;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999827:4,4:4-4,4-4:17,16,0,0:4,17:NULL:213.35:366.612,131.36:0.0,0.0:0.0,0.000140341,0.999864	0/0:25:0.999905:4,4:4-4,4-4:17,8,0,0:4,17:NULL:137.243:326.675,113.385:0.0,0.0:0.0,6.42069e-05,0.99994
+chr1	7542839	.	TCTCCTCTCCTCTCC	.	.	.	END=7542853;RU=tctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:225.92:366.612,131.36:0.0,0.0:0.0,2.00965e-06,1.0	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:172.591:326.675,113.385:0.0,0.0:0.0,8.90944e-08,1.0
+chr1	7544211	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=7544230;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998288:4,4:4-4,4-4:12,10,0,4:4,12:3,4:168.562:366.612,131.36:0.0,0.0:3.492e-37,0.000736078,0.999265	0/0:32:1.0:4,4:4-4,4-4:19,11,0,2:4,19:3,2:191.689:326.675,113.385:0.0,0.0:0.0,7.93364e-06,0.999994
+chr1	7544358	.	ATATATATATATATAT	.	.	.	END=7544373;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.778181:8,8:8-10,8-10:16,3,0,0:8,14|10,2:NULL:101.556:366.612,131.36:0.932167,0.932167:2.9458e-20,0.000123362,0.999879	0/0:23:0.997822:8,8:8-8,8-8:13,10,0,0:8,13:NULL:149.317:326.675,113.385:0.0,0.0:2.6257e-17,0.00140249,0.998603
+chr1	7546856	.	TTTGTTTGTTTG	.	.	.	END=7546867;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,18,0,2:3,29:2,2:296.504:366.612,131.36:0.0,0.0:0.0,6.73998e-09,1.0	0/0:45:1.0:3,3:3-3,3-3:32,13,0,0:3,32:NULL:240.066:326.675,113.385:0.0,0.0:0.0,1.40992e-09,1.0
+chr1	7549821	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7549896;RU=ag;PERIOD=2;REF=38.0;EXPTHRESH=38	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:25:0.0346401:43,43:32-43,32-43:0,10,0,15:NULL:5,2|6,1|8,1|9,1|13,1|18,1|25,1|26,1|27,1|29,1|30,1|32,1|39,1|40,1:210.818:366.612,131.36:3.20615,3.20615:2.41683e-15,0.418057,0.582021	1/1:29:0.240765:37,37:35-37,35-37:2,14,0,13:37,2:5,1|8,1|9,1|14,2|15,2|16,1|19,1|24,1|27,1|30,1|34,1:243.499:326.675,113.385:0.43384,0.43384:0.619148,0.35909,0.0218496
+chr1	7550748	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=7550765;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,14,0,2:3,23:2,2:239.754:366.612,131.36:0.0,0.0:0.0,6.73102e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.669:326.675,113.385:0.0,0.0:0.0,2.4095e-07,1.0
+chr1	7554806	.	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=7554849;RU=tatt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999608:9,9:9-9,9-9:15,12,0,5:9,15:3,1|5,2|7,2:210.091:366.612,131.36:0.0,0.0:0.999896,0.000104551,7.20019e-34	0/0:31:0.995921:11,11:11-11,11-11:11,10,0,10:11,11:5,1|6,2|7,2|9,1|10,4:208.914:326.675,113.385:0.0,0.0:1.39714e-23,0.00136196,0.998641
+chr1	7559127	.	GTTAATGGTTAATGGTTAATGGTTAATG	.	.	.	END=7559154;RU=gttaatg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:20,11,0,5:4,20:3,5:213.852:366.612,131.36:0.0,0.0:0.0,3.7562e-06,1.0	0/0:38:0.999927:4,4:4-4,4-4:16,14,0,8:4,16:3,8:247.545:326.675,113.385:0.0,0.0:0.0,5.09107e-05,0.999949
+chr1	7560900	.	TTTATTTATTTATTTATTTA	.	.	.	END=7560919;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:5,5:5-5,5-5:26,9,0,3:5,26:4,3:204.862:366.612,131.36:0.0,0.0:0.0,4.48993e-08,1.0	0/0:41:1.0:5,5:5-5,5-5:30,8,0,2:5,30:3,1|4,1:207.471:326.675,113.385:0.0,0.0:0.0,5.3766e-09,1.0
+chr1	7570199	.	TTGTTGTTGTTG	.	.	.	END=7570210;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999875:4,4:4-4,4-4:16,11,0,3:4,16:3,3:187.712:366.612,131.36:0.0,0.0:0.0,5.7529e-05,0.999942	0/0:33:1.00001:4,4:4-4,4-4:21,12,0,0:4,21:NULL:193.419:326.675,113.385:0.0,0.0:0.0,3.83183e-06,1.0
+chr1	7579482	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7579505;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.99029:8,8:2-8,2-8:10,21,0,10:8,10:2,3|3,1|5,1|7,5:307.104:366.612,131.36:2.89082,2.89082:0.0,0.000535287,0.999469	0/0:40:0.995425:6,6:5-6,5-6:22,11,0,7:5,2|6,20:2,1|3,1|4,1|5,4:251.596:326.675,113.385:0.398507,0.398507:0.0,0.00459544,0.995416
+chr1	7584141	.	AACAACAACAAC	.	.	.	END=7584152;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:24,12,0,0:4,24:NULL:208.236:366.612,131.36:0.0,0.0:0.0,8.88332e-07,1.0	0/0:29:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:152.193:326.675,113.385:0.0,0.0:0.0,3.31203e-06,1.0
+chr1	7586036	.	TGGGTGGGTGGG	.	.	.	END=7586047;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:25,21,0,0:3,25:NULL:286.938:366.612,131.36:0.0,0.0:0.0,2.03703e-07,1.0	0/0:31:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:197.905:326.675,113.385:0.0,0.0:0.0,4.50361e-05,0.999956
+chr1	7590013	.	ATGTATGTATGTATGTATGTATGTATGT	ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	END=7590040;RU=atgt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:1.0:11,11:11-11,11-11:20,20,0,22:11,20:4,1|5,2|6,2|7,4|8,5|9,1|10,7:432.91:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:53:1.0:7,7:7-7,7-7:27,15,0,11:7,27:2,1|3,2|4,2|5,3|6,3:334.025:326.675,113.385:0.0,0.0:6.34877e-36,7.12813e-08,1.0
+chr1	7591071	.	GAGGAGGAGGAGGAGGAG	.	.	.	END=7591088;RU=gag;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999987:6,6:6-6,6-6:20,28,0,0:6,20:NULL:346.721:366.612,131.36:0.0,0.0:0.0,2.01279e-05,0.99998	0/0:48:1.00001:6,6:6-6,6-6:22,24,0,2:6,22:4,1|5,1:315.295:326.675,113.385:0.0,0.0:0.0,1.8212e-06,1.0
+chr1	7592319	.	CAAACAAACAAA	.	.	.	END=7592330;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.998935:3,3:3-3,3-3:13,13,0,3:3,13:2,3:195.04:366.612,131.36:0.0,0.0:8.418e-42,0.000410217,0.999591	0/0:14:0.997808:3,3:3-3,3-3:12,2,0,0:3,12:NULL:65.2842:326.675,113.385:0.0,0.0:6.32806e-39,0.000946074,0.999058
+chr1	7593902	.	AAACAAACAAACAAAC	.	.	.	END=7593917;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:4,4:4-4,4-4:31,28,0,3:4,31:3,3:401.189:366.612,131.36:0.0,0.0:0.0,1.30138e-09,1.0	0/0:44:1.00001:4,4:4-4,4-4:22,18,0,4:4,22:2,1|3,3:291.754:326.675,113.385:0.0,0.0:0.0,2.25469e-06,1.0
+chr1	7604547	.	TTAATTAATTAA	.	.	.	END=7604558;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.99893:3,3:3-3,3-3:13,27,0,0:3,13:NULL:298.801:366.612,131.36:0.0,0.0:2.38039e-40,0.000887786,0.999118	0/0:33:0.999946:3,3:3-3,3-3:17,16,0,0:3,17:NULL:206.927:326.675,113.385:0.0,0.0:0.0,4.86683e-05,0.999955
+chr1	7606004	.	CTGCTGCTGCTG	CTG	.	.	END=7606015;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.000327754:1,1:1-1,1-1:0,1,0,0:NULL:NULL:8.70265:366.612,131.36:0.0,0.0:0.0027931,0.119525,0.877789	0/0:50:1.0:4,4:4-4,4-4:33,17,0,0:4,33:NULL:284.495:326.675,113.385:0.0,0.0:0.0,1.60651e-09,1.0
+chr1	7614755	.	TCCTCCTCCTCC	.	.	.	END=7614766;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:4,4:4-4,4-4:32,19,0,2:4,32:3,2:316.87:366.612,131.36:0.0,0.0:0.0,9.31883e-10,1.0	0/0:55:1.0:4,4:4-4,4-4:39,13,0,3:4,39:3,3:289.997:326.675,113.385:0.0,0.0:0.0,7.01508e-12,1.0
+chr1	7618269	.	AATAAATAAATA	.	.	.	END=7618280;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:244.391:366.612,131.36:0.0,0.0:0.0,9.92004e-08,1.0	0/0:27:1.0:3,3:3-3,3-3:25,2,0,0:3,25:NULL:115.743:326.675,113.385:0.0,0.0:0.0,1.26847e-07,1.0
+chr1	7621644	.	CTTTCTTTCTTT	.	.	.	END=7621655;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995956:3,3:3-3,3-3:11,19,0,0:3,11:NULL:225.21:366.612,131.36:0.0,0.0:8.52516e-38,0.00211426,0.99789	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.959:326.675,113.385:0.0,0.0:0.0,1.43963e-07,1.0
+chr1	7624737	.	CAACAACAACAACAACAACAACAACAACAA	CAACAACAACAACAACAACAACAACAACAACAACAA	.	.	END=7624766;RU=caa;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.998272:12,12:9-12,9-12:14,18,0,7:12,14:4,1|5,1|6,1|7,1|10,3:281.034:366.612,131.36:1.03993,1.03993:0.0,0.000371058,0.99963	0/0:40:1.0:10,10:10-10,10-10:24,9,0,6:10,24:6,2|7,2|9,2:226.838:326.675,113.385:0.0,0.0:0.0,2.91704e-07,1.0
+chr1	7626618	.	TTATTTATTTATTTAT	.	.	.	END=7626633;RU=ttat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:4,4:4-4,4-4:32,25,0,4:4,32:2,1|3,3:372.388:366.612,131.36:0.0,0.0:0.0,1.15553e-09,1.0	0/0:24:1.0:4,4:4-4,4-4:19,3,0,2:4,19:2,1|3,1:115.882:326.675,113.385:0.0,0.0:0.0,6.68964e-06,0.999994
+chr1	7630404	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7630451;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.380134:23,23:21-24,21-24:6,9,0,11:22,2|23,4:6,2|7,1|8,1|11,2|14,1|16,1|17,1|22,2:205.339:366.612,131.36:0.851485,0.851485:0.92278,0.0772677,4.64652e-05	0/2:58:0.983016:24,25:23-24,23-25:21,13,0,23:23,8|24,11|25,2:4,1|6,1|8,1|10,2|11,1|12,1|14,1|15,1|16,1|17,3|18,2|20,1|21,2|22,2|23,1|24,1|25,1:429.446:326.675,113.385:0.475866,0.848371:1.52509e-19,0.0136464,0.986385
+chr1	7632861	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7632920;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:35:0.999725:14,15:14-14,14-15:6,17,0,12:14,4|15,2:3,1|4,1|5,2|6,1|8,1|9,3|11,1|12,1|13,1:269.527:366.612,131.36:0.14072,0.311527:0.000176912,0.999826,7.76206e-08	0/0:62:0.930921:15,15:14-15,14-15:8,31,0,22:15,8:3,1|4,4|5,2|6,1|7,1|8,1|9,4|10,3|11,4|13,1:479.498:326.675,113.385:0.499387,0.499387:6.14073e-22,0.0616203,0.938469
+chr1	7633359	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7633396;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.420345:22,27:20-22,20-27:7,15,0,13:20,3|22,4:7,1|8,1|9,1|11,2|13,1|16,1|17,2|18,2|20,1|27,1:289.539:366.612,131.36:0.651061,3.31844:1.51187e-26,4.74397e-08,1.0	0/0:21:0.79191:19,19:19-19,19-19:6,7,0,8:19,6:8,1|10,1|12,2|13,1|15,1|17,1|18,1:157.17:326.675,113.385:0.0,0.0:1.67294e-08,0.0692101,0.930883
+chr1	7633397	.	ATTAATTAATTA	ATTAATTAATTAATTA	.	.	END=7633408;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.605946:4,4:1-4,1-4:5,12,0,0:4,5:NULL:133.234:366.612,131.36:0.585081,0.585081:1.87865e-14,0.192351,0.807701	0/0:17:0.99704:3,3:3-3,3-3:12,5,0,0:3,12:NULL:96.7465:326.675,113.385:0.0,0.0:1.72428e-21,0.00151512,0.998489
+chr1	7637624	.	CACACACACACACA	CACACACACACACACA,CACACACACACACACACA	.	.	END=7637637;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.999391:8,9:8-10,9-10:12,25,0,0:8,3|9,7|10,2:NULL:285.742:366.612,131.36:0.683384,0.21692:3.87704e-34,1.49308e-06,1.0	0/0:38:0.999836:7,7:7-9,7-9:27,10,0,0:7,24|8,3:NULL:204.461:326.675,113.385:0.405095,0.405095:1.08056e-35,1.06684e-07,1.0
+chr1	7637849	.	TAATAATAATAA	.	.	.	END=7637860;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:21,28,0,0:4,21:NULL:332.138:366.612,131.36:0.0,0.0:0.0,4.61686e-06,0.999995	0/0:37:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:226.901:326.675,113.385:0.0,0.0:0.0,1.6664e-06,1.0
+chr1	7642243	.	AACAACAACAACAACAACAACAACAAC	AACAACAACAACAACAACAACAACAACAAC	.	.	END=7642269;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.99301:10,10:9-10,9-10:18,14,0,4:9,2|10,16:5,2|7,1|9,1:244.852:366.612,131.36:0.323567,0.323567:0.0,1.39032e-05,0.999987	0/0:32:0.994938:9,9:9-10,9-10:11,13,0,7:9,11:4,2|6,1|7,1|8,3:214.352:326.675,113.385:0.46122,0.46122:3.66479e-24,0.00171286,0.998292
+chr1	7644073	.	GGGTGGGTGGGT	.	.	.	END=7644084;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.990731:3,3:3-3,3-3:11,24,0,2:3,11:2,2:274.989:366.612,131.36:0.0,0.0:3.1445e-32,0.00562824,0.994385	0/0:48:0.996096:3,3:3-3,3-3:12,36,0,0:3,12:NULL:366.483:326.675,113.385:0.0,0.0:1.17169e-35,0.00335808,0.996649
+chr1	7651115	.	TTTCTTTCTTTC	.	.	.	END=7651126;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999978:3,3:3-3,3-3:18,16,0,0:3,18:NULL:223.168:366.612,131.36:0.0,0.0:0.0,2.81898e-05,0.999972	0/0:26:0.99948:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.136:326.675,113.385:0.0,0.0:0.0,0.000349136,0.999652
+chr1	7652360	.	GAGAGAGAGAGAGAGAGA	GAGAGAGA,GAGAGAGAGAGAGA	.	.	END=7652377;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:49:0.999988:7,9:7-9,9-9:27,17,0,4:7,10|9,17:5,1|8,3:316.932:366.612,131.36:0.472766,0.0:5.84026e-33,0.999986,1.46053e-05	1/0:45:0.929022:4,9:4-9,9-9:29,15,0,0:4,5|7,5|9,19:NULL:288.077:326.675,113.385:1.79969,0.0:1.63191e-37,0.99934,0.000661574
+chr1	7658674	.	TTTATTTATTTA	.	.	.	END=7658685;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:221.295:366.612,131.36:0.0,0.0:0.0,1.78929e-06,1.0	0/0:48:1.0:3,3:3-3,3-3:30,12,0,6:3,30:2,6:271.917:326.675,113.385:0.0,0.0:0.0,2.61691e-09,1.0
+chr1	7660964	.	TGCCTGCCTGCCTGCC	.	.	.	END=7660979;RU=tgcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999939:4,4:4-4,4-4:17,12,0,4:4,17:3,4:203.556:366.612,131.36:0.0,0.0:0.0,2.74925e-05,0.999972	0/0:27:0.999887:4,4:3-4,3-4:16,7,0,3:4,16:2,1|3,2:152.085:326.675,113.385:0.419363,0.419363:0.0,5.94852e-05,0.999941
+chr1	7660996	.	TCTTTCTTTCTTTCTT	.	.	.	END=7661011;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992254:4,4:4-4,4-4:11,11,0,0:4,11:NULL:141.609:366.612,131.36:0.0,0.0:4.56328e-37,0.0052796,0.994732	0/0:22:0.999809:4,4:4-4,4-4:16,6,0,0:4,16:NULL:120.568:326.675,113.385:0.0,0.0:0.0,0.000139604,0.999864
+chr1	7661246	.	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTG	.	.	END=7661265;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.829463:9,9:8-12,8-12:15,17,0,2:8,2|9,13:6,1|7,1:244.023:366.612,131.36:1.45844,1.45844:0.999522,0.000480569,7.49084e-22	0/0:37:0.970158:10,10:10-11,10-11:20,12,0,5:10,17|11,3:5,1|6,1|7,1|8,2:243.239:326.675,113.385:0.374147,0.374147:2.30016e-25,9.69941e-06,0.999993
+chr1	7661271	.	TTGTTGTTGTTG	TTGTTGTTGTTGTTG	.	.	END=7661282;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:38:0.999729:4,5:4-5,5-5:18,20,0,0:4,3|5,15:NULL:266.92:366.612,131.36:0.425627,0.0:0.0,6.53169e-07,1.0	0/0:37:1.0:4,4:4-4,4-4:26,11,0,0:4,26:NULL:207.408:326.675,113.385:0.0,0.0:0.0,1.57076e-07,1.0
+chr1	7667977	.	GGGGTGGGGTGGGGT	.	.	.	END=7667991;RU=ggggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:3,3:3-3,3-3:34,25,0,3:3,34:2,3:373.822:366.612,131.36:0.0,0.0:0.0,3.26358e-10,1.0	0/0:66:1.0:3,3:3-3,3-3:38,25,0,3:3,38:2,3:409.533:326.675,113.385:0.0,0.0:0.0,2.39564e-11,1.0
+chr1	7668272	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7668301;RU=ga;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.238356:24,29:23-26,26-30:4,11,0,7:23,2|24,2:8,1|15,1|17,1|19,1|28,3:182.126:366.612,131.36:0.77595,0.915079:0.0,0.0,1.0	0/0:63:0.999955:15,15:15-15,15-15:33,18,0,12:14,5|15,28:5,1|7,1|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,1:408.274:326.675,113.385:0.0990099,0.0990099:3.48e-39,4.78434e-05,0.999955
+chr1	7668463	.	GGAGAGGAGAGGAGA	.	.	.	END=7668477;RU=ggaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999726:3,3:3-3,3-3:15,6,0,0:3,15:NULL:111.479:366.612,131.36:0.0,0.0:2.9388e-41,0.000137001,0.999865	0/0:22:0.884408:3,3:3-3,3-3:6,16,0,0:3,6:NULL:168.509:326.675,113.385:0.0,0.0:8.96207e-17,0.0784737,0.921624
+chr1	7678104	.	TGTTTTGTTTTGTTT	.	.	.	END=7678118;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.990119:3,3:3-3,3-3:10,6,0,0:3,10:NULL:96.8139:366.612,131.36:0.0,0.0:1.51957e-31,0.00544876,0.994565	0/0:25:0.999438:3,3:3-3,3-3:14,11,0,0:3,14:NULL:162.108:326.675,113.385:0.0,0.0:2.4e-44,0.00034485,0.999659
+chr1	7684673	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7684693;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.992494:7,7:7-7,7-7:11,8,0,2:7,11:3,1|6,1:134.095:366.612,131.36:0.0,0.0:1.22226e-33,0.00318471,0.996822	0/0:29:0.998834:7,7:7-7,7-7:13,12,0,4:7,13:4,1|5,2|6,1:193.784:326.675,113.385:0.0,0.0:1.27248e-39,0.000558105,0.999446
+chr1	7686794	.	TTATTTATTTAT	.	.	.	END=7686805;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999415:3,3:3-3,3-3:14,11,0,0:3,14:NULL:159.567:366.612,131.36:0.0,0.0:0.0,0.000336862,0.999666	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:156.467:326.675,113.385:0.0,0.0:0.0,2.85844e-07,1.0
+chr1	7688060	.	TATATTATATTATAT	.	.	.	END=7688074;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997224:3,3:3-3,3-3:12,12,0,0:3,12:NULL:159.819:366.612,131.36:0.0,0.0:3.5616e-40,0.00164966,0.998353	0/0:21:0.99878:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.606:326.675,113.385:0.0,0.0:1.23e-43,0.000718745,0.999286
+chr1	7691107	.	CATCATCATCAT	.	.	.	END=7691118;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:4,4:4-4,4-4:43,16,0,2:4,43:3,2:325.445:366.612,131.36:0.0,0.0:0.0,4.72132e-13,1.0	0/0:56:1.0:4,4:4-4,4-4:35,17,0,4:4,35:3,4:322.898:326.675,113.385:0.0,0.0:0.0,7.26367e-11,1.0
+chr1	7694774	.	GTTGTTGTTGTTGTTGTT	.	.	.	END=7694791;RU=gtt;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999814:6,6:5-6,5-6:16,16,0,0:6,16:NULL:210.71:366.612,131.36:0.35561,0.35561:1.7937e-41,0.000124117,0.999879	0/0:22:0.9979:6,6:6-6,6-6:12,8,0,2:6,12:4,1|5,1:136.005:326.675,113.385:0.0,0.0:5.14711e-31,0.00100407,0.998998
+chr1	7694925	.	AAAAACAAAAAACAAAAAACA	.	.	.	END=7694945;RU=aaaaaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994642:3,3:3-3,3-3:11,14,0,0:3,11:NULL:172.931:366.612,131.36:0.0,0.0:6.27708e-36,0.0041541,0.995855	0/0:24:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:116.335:326.675,113.385:0.0,0.0:0.0,3.64749e-06,1.0
+chr1	7695814	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7695835;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999993:11,11:6-11,6-11:29,16,0,7:10,3|11,26:6,2|8,2|9,2|11,1:338.434:366.612,131.36:1.08686,1.08686:6e-44,9.69241e-06,0.999993	0/1:28:0.293335:11,15:11-11,11-15:16,6,0,5:11,16:7,1|10,3|15,1:170.999:326.675,113.385:0.0,1.9624:1.21793e-27,7.70312e-08,1.0
+chr1	7695943	.	ATTTATTTATTTATTT	ATTT	.	.	END=7695958;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.100699:1,1:1-3,1-3:0,24,0,0:NULL:NULL:233.385:366.612,131.36:0.681228,0.681228:0.674214,0.300808,0.0250224	0/0:28:0.999907:4,4:4-4,4-4:17,11,0,0:4,17:NULL:160.39:326.675,113.385:0.0,0.0:1.4e-44,5.94761e-05,0.999941
+chr1	7696936	.	AAGGAAGGAAGG	.	.	.	END=7696947;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.9998:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.238:366.612,131.36:0.0,0.0:0.0,9.38424e-05,0.999909	0/0:49:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:311.19:326.675,113.385:0.0,0.0:0.0,4.7513e-08,1.0
+chr1	7708555	.	TATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATA	.	.	END=7708594;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.727258:13,13:5-13,5-13:7,6,0,0:13,7:NULL:87.3032:366.612,131.36:3.78047,3.78047:1.0,0.0,0.0	0/0:4:0.210509:20,20:19-20,19-20:2,2,0,0:20,2:NULL:27.8346:326.675,113.385:0.284901,0.284901:0.0129125,0.424261,0.562949
+chr1	7714389	.	TTTATTTATTTA	.	.	.	END=7714400;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999999:3,3:3-3,3-3:18,15,0,2:3,18:2,2:224.081:366.612,131.36:0.0,0.0:0.0,1.10948e-05,0.999993	0/0:21:0.998997:3,3:3-3,3-3:13,6,0,2:3,13:2,2:118.63:326.675,113.385:0.0,0.0:5.2e-44,0.000355482,0.999645
+chr1	7716510	.	TTCTTCTTCTTC	.	.	.	END=7716521;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:31,21,0,0:4,31:NULL:313.248:366.612,131.36:0.0,0.0:0.0,3.48626e-09,1.0	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:219.121:326.675,113.385:0.0,0.0:0.0,4.9399e-07,1.0
+chr1	7722901	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7722920;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.809748:4,4:4-4,4-4:4,18,0,3:4,4:3,3:206.834:366.612,131.36:0.0,0.0:5.48788e-15,0.0990296,0.90107	0/0:15:0.993087:4,4:4-4,4-4:11,4,0,0:4,11:NULL:82.8366:326.675,113.385:0.0,0.0:1.07704e-37,0.00430158,0.995711
+chr1	7726872	.	GCATGCATGCAT	.	.	.	END=7726883;RU=gcat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:242.362:366.612,131.36:0.0,0.0:0.0,6.85042e-08,1.0	0/0:38:1.0:3,3:3-3,3-3:25,8,0,5:3,25:2,5:204.689:326.675,113.385:0.0,0.0:0.0,6.51567e-08,1.0
+chr1	7730158	.	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC,TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC,TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	.	.	END=7730267;RU=ttccc;PERIOD=5;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.235495:18,20:18-18,19-23:6,5,0,13:18,6:4,1|5,1|6,2|7,1|8,2|13,1|14,1|17,1|19,1|20,2:177.152:366.612,131.36:0.557277,1.07269:0.399266,0.600796,5.83373e-27	3/3:37:0.0548084:21,21:8-23,8-23:0,12,0,22:NULL:3,1|4,2|5,1|8,1|9,1|10,1|11,2|13,1|14,2|16,3|18,1|19,2|20,4:268.821:326.675,113.385:5.02335,5.02335:0.261242,0.509873,0.228898
+chr1	7730913	.	TTATTTATTTAT	.	.	.	END=7730924;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,14,0,0:3,20:NULL:204.163:366.612,131.36:0.0,0.0:0.0,2.67187e-06,1.0	0/0:31:0.999976:3,3:3-3,3-3:17,12,0,2:3,17:2,2:191.298:326.675,113.385:0.0,0.0:0.0,1.77926e-05,0.999986
+chr1	7730966	.	TTAATTAATTAA	.	.	.	END=7730977;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:151.309:366.612,131.36:0.0,0.0:0.0,6.24065e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:181.216:326.675,113.385:0.0,0.0:0.0,4.03032e-06,0.999995
+chr1	7731592	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7731635;RU=tc;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:49:0.326748:25,28:25-25,24-30:10,25,0,14:24,3|25,7:4,1|5,1|9,1|13,1|15,1|16,1|17,1|18,1|19,1|21,1|22,2|27,1|28,1:400.056:366.612,131.36:0.0990099,1.45096:0.0,3.79329e-14,1.0	0/1:40:0.564427:22,24:21-22,21-24:10,17,0,12:21,4|22,6:9,1|11,3|13,1|18,1|19,1|21,3|22,1|24,1:316.193:326.675,113.385:0.298675,1.12871:1.40782e-18,0.000296911,0.999705
+chr1	7731916	.	TGTATGTATGTA	.	.	.	END=7731927;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:19,18,0,4:3,19:2,4:275.074:366.612,131.36:0.0,0.0:0.0,7.01978e-06,0.999994	0/0:22:0.999697:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.413:326.675,113.385:0.0,0.0:0.0,0.00016162,0.999841
+chr1	7731957	.	TGTATGTATGTA	.	.	.	END=7731968;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:245.533:366.612,131.36:0.0,0.0:0.0,3.28198e-07,1.0	0/0:26:0.999966:3,3:3-3,3-3:18,6,0,2:3,18:2,2:143.569:326.675,113.385:0.0,0.0:0.0,1.6661e-05,0.999986
+chr1	7732202	.	GGTTGGGTTGGGTTG	.	.	.	END=7732216;RU=ggttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:287.468:366.612,131.36:0.0,0.0:0.0,2.66084e-07,1.0	0/0:26:0.999927:3,3:3-3,3-3:17,9,0,0:3,17:NULL:154.298:326.675,113.385:0.0,0.0:0.0,5.22394e-05,0.999949
+chr1	7736177	.	CACACACACACACA	.	.	.	END=7736190;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999598:7,7:4-7,4-7:15,16,0,4:7,15:5,1|6,3:242.359:366.612,131.36:1.29472,1.29472:1.71162e-36,0.000150262,0.99985	0/0:31:0.977661:7,7:6-7,6-7:21,6,0,4:6,2|7,19:5,1|6,3:179.53:326.675,113.385:0.412766,0.412766:7.098e-42,0.0223881,0.977653
+chr1	7741556	.	CTCTCTCTCTCT	.	.	.	END=7741567;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999959:6,6:6-6,6-6:18,3,0,0:6,18:NULL:99.8163:366.612,131.36:0.0,0.0:0.0,2.33026e-05,0.999979	0/0:39:1.0:6,6:6-6,6-6:23,16,0,0:6,23:NULL:239.065:326.675,113.385:0.0,0.0:0.0,9.61291e-07,1.0
+chr1	7742062	.	GTGGTGGTGGTGGTGGTGGTGGTGGTG	GTGGTGGTGGTGGTG	.	.	END=7742088;RU=gtg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:65:0.80763:5,9:5-9,9-9:21,39,0,5:5,2|9,19:5,2|7,1|8,1|9,1:493.627:366.612,131.36:1.99912,0.0:0.0,0.80792,0.192135	0/0:62:0.919382:9,9:5-9,5-9:26,32,0,4:5,2|8,2|9,22:6,1|8,3:453.025:326.675,113.385:1.77932,1.77932:0.0,0.0807176,0.919377
+chr1	7750668	.	AGGAGGAGGAGGAGGAGG	.	.	.	END=7750685;RU=agg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999891:6,6:6-6,6-6:16,19,0,3:6,16:4,2|5,1:262.318:366.612,131.36:0.0,0.0:1e-44,6.22465e-05,0.99994	0/0:53:1.0:6,6:6-6,6-6:31,16,0,5:6,31:3,2|5,3:309.142:326.675,113.385:0.0,0.0:0.0,1.43422e-09,1.0
+chr1	7751603	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=7751648;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.924204:20,20:19-20,19-20:11,13,0,15:19,2|20,9:5,2|7,1|8,1|10,1|11,1|12,2|15,2|18,3|19,2:286.55:366.612,131.36:0.284901,0.284901:0.999339,0.000667048,6.53359e-23	0/0:53:0.902676:23,23:23-24,23-24:8,19,0,25:23,8:5,1|7,2|8,2|9,1|10,2|11,2|12,2|13,1|14,1|16,1|17,1|18,2|19,1|20,2|21,3|22,1:408.968:326.675,113.385:0.398507,0.398507:7.15271e-09,0.0285055,0.971546
+chr1	7753197	.	CATACATACATACATACATACATACATACATACATA	CATACATACATACATACATACATACATACATACATACATA	.	.	END=7753232;RU=cata;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999229:10,10:10-10,10-10:13,21,0,15:10,13:4,3|5,3|7,2|8,4|9,3:359.982:366.612,131.36:0.0,0.0:0.0,3.85728e-05,0.999963	0/0:48:1.0:9,9:9-9,9-9:19,13,0,15:9,19:3,1|4,3|5,5|6,2|7,1|8,3:306.119:326.675,113.385:0.0,0.0:3.61896e-38,5.86017e-06,0.999995
+chr1	7754174	.	TTGTCCCTTGTCCCTTGTCCC	.	.	.	END=7754194;RU=ttgtccc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.998875:3,3:3-3,3-3:13,10,0,0:3,13:NULL:141.821:366.612,131.36:0.0,0.0:7.13e-43,0.000787695,0.999217	0/0:30:1.00001:3,3:3-3,3-3:21,7,0,2:3,21:2,2:165.233:326.675,113.385:0.0,0.0:0.0,1.73527e-06,1.0
+chr1	7756374	.	GTGGGTGGGTGG	.	.	.	END=7756385;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,10,0,3:3,28:2,3:226.375:366.612,131.36:0.0,0.0:0.0,6.78654e-09,1.0	0/0:58:1.00001:3,3:3-3,3-3:21,35,0,2:3,21:2,2:419.101:326.675,113.385:0.0,0.0:0.0,2.44914e-06,1.0
+chr1	7757086	.	TAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTA	TAGTATAGTATAGTATAGTATAGTATAGTA	.	.	END=7757130;RU=tagta;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.0:6,6:6-6,6-6:29,11,0,5:6,29:2,2|4,1|5,2:253.025:366.612,131.36:0.0,0.0:1.0,3.5764e-09,0.0	0/0:38:0.999994:9,9:6-9,6-9:19,12,0,6:9,19:2,2|3,1|6,1|7,1|8,1:237.37:326.675,113.385:0.810189,0.810189:3e-45,1.63925e-05,0.999986
+chr1	7769821	.	TAAATAAATAAA	.	.	.	END=7769832;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:268.979:366.612,131.36:0.0,0.0:0.0,4.49312e-08,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:151.86:326.675,113.385:0.0,0.0:0.0,2.38585e-06,1.0
+chr1	7771289	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=7771316;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.0:6,6:6-6,6-6:20,14,0,3:6,20:2,1|4,2:235.568:366.612,131.36:0.0,0.0:1.0,2.87929e-06,5.2e-44	0/0:21:0.997637:7,7:7-7,7-7:12,7,0,2:7,12:2,1|6,1:126.413:326.675,113.385:0.0,0.0:1.45808e-39,0.0012583,0.998747
+chr1	7771869	.	TCTTTCTTTCTTTCTTTCTT	.	.	.	END=7771888;RU=tctt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999699:5,5:5-5,5-5:14,16,0,4:5,14:2,1|4,3:230.877:366.612,131.36:0.0,0.0:1.21585e-40,0.000162183,0.999841	0/0:23:0.999415:5,5:5-5,5-5:14,6,0,3:5,14:2,1|3,1|4,1:137.823:326.675,113.385:0.0,0.0:4.70182e-40,0.000351915,0.999651
+chr1	7774572	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7774631;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:1.0:10,12:10-10,12-12:12,8,0,2:10,6|12,6:6,1|11,1:147.747:366.612,131.36:0.19802,0.0:1.0,5.84118e-14,1.27227e-40	0/0:28:0.909649:15,15:14-15,14-15:6,12,0,9:15,6:4,2|6,1|8,1|12,1|13,1|14,3:205.97:326.675,113.385:0.469019,0.469019:1.82433e-14,0.0521929,0.947889
+chr1	7774898	.	GAGAAGAGAAGAGAAGAGAAGAGAAGAGAA	GAGAA	.	.	END=7774927;RU=gagaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.0866575:1,1:1-3,1-3:0,30,0,0:NULL:NULL:265.586:366.612,131.36:0.628849,0.628849:0.821411,0.173243,0.00542432	0/0:24:0.404266:6,6:3-6,3-6:3,18,0,3:6,3:3,1|5,2:195.218:326.675,113.385:1.06683,1.06683:4.95948e-08,0.451993,0.54812
+chr1	7778042	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7778123;RU=ga;PERIOD=2;REF=41.0;EXPTHRESH=41	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.0487611:20,20:18-21,18-21:0,17,0,10:NULL:5,1|6,1|8,2|9,2|14,2|19,1|20,1:233.463:366.612,131.36:0.774179,0.774179:1.0,0.0,0.0	1/2:32:0.0276154:20,52:14-52,31-53:0,16,0,16:NULL:4,1|7,1|10,1|12,3|15,1|18,2|20,1|28,2|39,1|45,2|52,1:284.165:326.675,113.385:12.7726,4.55678:9.26909e-22,0.769413,0.230618
+chr1	7779108	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=7779135;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.998802:10,10:10-10,10-10:14,12,0,8:10,14:4,1|5,2|6,2|8,3:230.951:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:22:0.993219:14,14:14-15,14-15:11,5,0,5:14,11:6,2|8,1|11,1|13,1:133.13:326.675,113.385:0.35561,0.35561:3.71014e-16,0.00236198,0.997647
+chr1	7781851	.	AACAAAACAAAACAA	.	.	.	END=7781865;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:212.897:366.612,131.36:0.0,0.0:0.0,5.38134e-06,0.999995	0/0:38:1.0:3,3:3-3,3-3:25,13,0,0:3,25:NULL:214.334:326.675,113.385:0.0,0.0:0.0,2.10585e-07,1.0
+chr1	7788005	.	ACCCACCCACCC	.	.	.	END=7788016;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999289:3,3:3-3,3-3:14,22,0,0:3,14:NULL:248.527:366.612,131.36:0.0,0.0:2.657e-42,0.00049849,0.999506	0/0:27:0.999849:3,3:3-3,3-3:16,11,0,0:3,16:NULL:167.991:326.675,113.385:0.0,0.0:0.0,0.000115193,0.999887
+chr1	7795035	.	ACCCACCCACCC	.	.	.	END=7795046;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.992668:3,3:3-3,3-3:11,18,0,0:3,11:NULL:205.859:366.612,131.36:0.0,0.0:1.09167e-32,0.00539508,0.994618	0/0:39:0.998387:3,3:3-3,3-3:13,26,0,0:3,13:NULL:287.107:326.675,113.385:0.0,0.0:2.00258e-38,0.00140911,0.998595
+chr1	7798081	.	TATTTTATTTTATTT	TATTT	.	.	END=7798095;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:20:0.496895:1,3:1-3,1-3:2,18,0,0:3,2:NULL:174.067:366.612,131.36:0.999559,0.623055:2.27498e-07,0.624351,0.375705	0/0:27:0.999956:3,3:3-3,3-3:17,10,0,0:3,17:NULL:157.95:326.675,113.385:0.0,0.0:0.0,3.8157e-05,0.999964
+chr1	7799463	.	ATGATGATGATG	.	.	.	END=7799474;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:27,22,0,2:4,27:3,2:322.329:366.612,131.36:0.0,0.0:0.0,4.87752e-08,1.0	0/0:38:1.0:4,4:4-4,4-4:30,8,0,0:4,30:NULL:188.498:326.675,113.385:0.0,0.0:0.0,6.34163e-09,1.0
+chr1	7801805	.	GTGGGTGGGTGG	.	.	.	END=7801816;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:223.028:366.612,131.36:0.0,0.0:0.0,1.55783e-06,1.0	0/0:37:0.999994:3,3:3-3,3-3:19,16,0,2:3,19:2,2:233.35:326.675,113.385:0.0,0.0:0.0,1.24675e-05,0.999987
+chr1	7803754	.	ACCCACCCACCC	.	.	.	END=7803765;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999118:3,3:3-3,3-3:14,17,0,0:3,14:NULL:212.631:366.612,131.36:0.0,0.0:1.415e-42,0.000604116,0.9994	0/0:34:0.96189:3,3:3-3,3-3:8,26,0,0:3,8:NULL:262.362:326.675,113.385:0.0,0.0:5.20764e-25,0.0283073,0.971747
+chr1	7815175	.	TTGTTGTTGTTG	.	.	.	END=7815186;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:190.375:366.612,131.36:0.0,0.0:0.0,1.82115e-07,1.0	0/0:27:0.99998:4,4:4-5,4-5:18,6,0,2:4,18:3,2:140.519:326.675,113.385:0.284901,0.284901:2.1276e-41,1.56478e-05,0.999986
+chr1	7815188	.	TAGTAGTAGTAGTAGTAGTAG	.	.	.	END=7815208;RU=tag;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:7,7:7-7,7-7:21,12,0,5:7,21:5,1|6,4:233.821:366.612,131.36:0.0,0.0:0.0,1.60282e-06,1.0	0/0:25:0.999849:7,7:7-7,7-7:16,6,0,3:7,16:4,1|6,2:141.732:326.675,113.385:0.0,0.0:2.43164e-35,5.96846e-05,0.999941
+chr1	7817458	.	TTAATTAATTAA	.	.	.	END=7817469;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.983662:3,3:3-3,3-3:10,16,0,0:3,10:NULL:185.333:366.612,131.36:0.0,0.0:8.74342e-33,0.0118355,0.988189	0/0:14:0.929308:3,3:3-3,3-3:7,7,0,0:3,7:NULL:89.6001:326.675,113.385:0.0,0.0:1.61186e-23,0.0389226,0.961144
+chr1	7819272	.	ACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7819295;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.31213:18,25:18-18,18-28:8,12,0,13:18,8:5,2|8,1|9,1|12,2|16,2|17,3|24,1|25,1:256.603:366.612,131.36:0.0,2.54892:0.0,0.0,1.0	0/0:29:0.987278:12,12:11-12,11-12:14,11,0,4:11,2|12,12:8,2|9,1|10,1:196.047:326.675,113.385:0.236383,0.236383:1.05692e-17,0.0116967,0.98833
+chr1	7819739	.	ACCTGGGACGAGAAAACCTGGGACGAGAAAACCTGGGACGAGAAA	ACCTGGGACGAGAAAACCTGGGACGAGAAA	.	.	END=7819783;RU=acctgggacgagaaa;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.993555:2,2:2-2,2-2:11,14,0,0:2,11:NULL:183.204:366.612,131.36:0.0,0.0:0.99902,0.000983438,1.21058e-16	0/0:16:0.993527:3,3:3-3,3-3:11,5,0,0:3,11:NULL:95.4833:326.675,113.385:0.0,0.0:5.11705e-14,0.0047793,0.995235
+chr1	7820296	.	AAAAGAAAAGAAAAG	.	.	.	END=7820310;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.973171:3,3:3-3,3-3:9,11,0,0:3,9:NULL:136.448:366.612,131.36:0.19802,0.19802:7.20979e-29,0.0185596,0.981481	0/0:23:0.999993:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.7:326.675,113.385:0.0,0.0:0.0,1.19035e-05,0.999987
+chr1	7821542	.	TTTGTTTGTTTG	.	.	.	END=7821553;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.874:366.612,131.36:0.0,0.0:0.0,4.49495e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:21,12,0,0:3,21:NULL:185.675:326.675,113.385:0.0,0.0:0.0,4.07183e-06,0.999995
+chr1	7823455	.	TTTATTTATTTA	.	.	.	END=7823466;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:156.071:366.612,131.36:0.0,0.0:0.0,1.02177e-05,0.999993	0/0:23:0.999854:3,3:3-3,3-3:16,7,0,0:3,16:NULL:122.28:326.675,113.385:0.0,0.0:0.0,7.10557e-05,0.999932
+chr1	7838440	.	CTGCTGCTGCTG	.	.	.	END=7838451;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:19,9,0,3:4,19:3,3:182.054:366.612,131.36:0.0,0.0:0.0,7.13775e-06,0.999994	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:224.091:326.675,113.385:0.0,0.0:0.0,8.09682e-06,0.999994
+chr1	7840652	.	ACCCACCCACCC	.	.	.	END=7840663;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:5:0.633775:3,3:3-3,3-3:4,1,0,0:3,4:NULL:24.55:366.612,131.36:0.0,0.0:1.78363e-11,0.150741,0.849338	0/0:23:0.990279:3,3:3-3,3-3:10,13,0,0:3,10:NULL:152.789:326.675,113.385:0.0,0.0:1.10363e-26,0.00576428,0.994249
+chr1	7849736	.	GGGTGGGTGGGT	GGGT	.	.	END=7849747;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0580046:1,1:1-3,1-3:0,9,0,0:NULL:NULL:83.0494:366.612,131.36:1.03018,1.03018:0.182364,0.502118,0.315633	0/0:27:0.993975:3,3:3-3,3-3:10,15,0,2:3,10:2,2:188.748:326.675,113.385:0.0,0.0:1.60427e-28,0.00273042,0.997276
+chr1	7851717	.	ATTTTTTTATTTTTTTATTTTTTT	.	.	.	END=7851740;RU=attttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.995889:3,3:3-3,3-3:11,6,0,0:3,11:NULL:101.894:366.612,131.36:0.0,0.0:7.14769e-35,0.00241098,0.997595	0/0:15:0.943631:3,3:3-3,3-3:7,6,0,2:3,7:2,2:99.6613:326.675,113.385:0.0,0.0:2.55924e-22,0.0283061,0.971747
+chr1	7857369	.	TTTAATTTAATTTAATTTAATTTAA	TTTAATTTAATTTAATTTAATTTAATTTAA	.	.	END=7857393;RU=tttaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.981201:6,6:4-6,4-6:10,3,0,0:6,10:NULL:69.5344:366.612,131.36:0.985733,0.985733:4.18017e-39,0.0116041,0.98842	0/0:26:0.999993:5,5:5-5,5-5:19,7,0,0:5,19:NULL:141.068:326.675,113.385:0.0,0.0:0.0,1.77228e-05,0.999986
+chr1	7861967	.	TTTGTTTTGTTTTGT	.	.	.	END=7861981;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:26,24,0,2:3,26:2,2:334.791:366.612,131.36:0.0,0.0:0.0,1.30562e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:26,5,0,4:3,26:2,4:173.888:326.675,113.385:0.0,0.0:0.0,3.36513e-08,1.0
+chr1	7863803	.	TAAGATTAAGATTAAGAT	.	.	.	END=7863820;RU=taagat;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999948:3,3:3-3,3-3:17,21,0,0:3,17:NULL:268.794:366.612,131.36:0.0,0.0:0.0,5.8172e-05,0.999942	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.778:326.675,113.385:0.0,0.0:0.0,8.92912e-07,1.0
+chr1	7867431	.	AAACAAACAAACAAAC	.	.	.	END=7867446;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:34,12,0,0:4,34:NULL:255.579:366.612,131.36:0.0990099,0.0990099:0.0,5.22199e-10,1.0	0/0:44:1.0:4,4:4-4,4-4:25,16,0,3:4,25:2,2|3,1:271.543:326.675,113.385:0.0,0.0:0.0,1.07199e-07,1.0
+chr1	7871205	.	ATTTATTTATTTATTTATTT	.	.	.	END=7871224;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:5,5:5-5,5-5:27,16,0,5:5,27:2,2|3,2|4,1:299.309:366.612,131.36:0.0,0.0:0.0,1.8124e-08,1.0	0/0:37:0.999962:5,5:5-5,5-5:17,13,0,7:5,17:3,4|4,3:240.395:326.675,113.385:0.0,0.0:0.0,3.07993e-05,0.999971
+chr1	7879267	.	AAGAAAGAAAGA	.	.	.	END=7879278;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.5:366.612,131.36:0.0,0.0:0.0,1.94776e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:26,7,0,3:3,26:2,3:185.156:326.675,113.385:0.0,0.0:0.0,3.62187e-08,1.0
+chr1	7881454	.	GACAGACAGACA	.	.	.	END=7881465;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995138:3,3:3-3,3-3:11,19,0,0:3,11:NULL:223.799:366.612,131.36:0.0,0.0:3.50654e-37,0.00251302,0.997495	0/0:51:1.0:3,3:3-3,3-3:29,18,0,4:3,29:2,4:308.153:326.675,113.385:0.0,0.0:0.0,5.51923e-09,1.0
+chr1	7883786	.	ATTTATTTATTTATTTATTTATTT	ATTT	.	.	END=7883809;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:31:0.999929:6,6:6-6,6-6:17,10,0,4:6,17:3,1|4,1|5,1|6,1:191.156:326.675,113.385:0.0,0.0:0.0,2.64831e-05,0.999978
+chr1	7887170	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=7887201;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:43:0.988754:8,8:6-8,6-8:26,13,0,4:6,2|8,24:4,1|6,2|7,1:278.17:326.675,113.385:0.904844,0.904844:0.0,0.0112725,0.988754
+chr1	7888946	.	GACAGACAGACA	.	.	.	END=7888957;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.615416:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6225:366.612,131.36:0.0,0.0:8.99095e-14,0.154049,0.84603	0/0:39:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:210.054:326.675,113.385:0.0,0.0:0.0,1.55212e-08,1.0
+chr1	7891093	.	ATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATAT	.	.	END=7891130;RU=at;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0554638:18,18:17-20,17-20:0,15,0,2:NULL:12,2:149.827:366.612,131.36:1.15947,1.15947:0.220319,0.514231,0.265508	0/0:12:0.647398:19,19:18-22,18-22:6,4,0,0:19,6:NULL:62.7653:326.675,113.385:1.28538,1.28538:2.63552e-05,0.140772,0.859295
+chr1	7891383	.	TGTTTTGTTTTGTTT	.	.	.	END=7891397;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:243.922:366.612,131.36:0.0,0.0:0.0,1.33914e-07,1.0	0/0:25:0.999915:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.421:326.675,113.385:0.0,0.0:0.0,5.49623e-05,0.999948
+chr1	7892968	.	AATAATAATAAT	.	.	.	END=7892979;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:201.513:366.612,131.36:0.0,0.0:0.0,4.54687e-06,0.999995	0/0:33:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:180.598:326.675,113.385:0.0,0.0:0.0,7.9396e-07,1.0
+chr1	7895098	.	TTTTGTTTTGTTTTG	.	.	.	END=7895112;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.395108:3,3:1-3,1-3:3,22,0,0:3,3:NULL:218.472:366.612,131.36:0.734944,0.734944:2.0804e-10,0.469974,0.530126	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:242.509:326.675,113.385:0.0,0.0:0.0,1.08537e-07,1.0
+chr1	7898220	.	ATAGATAGATAG	.	.	.	END=7898231;RU=atag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,12,0,3:3,23:2,3:218.714:366.612,131.36:0.0,0.0:0.0,2.8081e-07,1.0	0/0:42:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:272.183:326.675,113.385:0.0,0.0:0.0,1.8962e-06,1.0
+chr1	7902277	.	CTCTCTTGCTCTCTTGCTCTCTTGCTCTCTTG	.	.	.	END=7902308;RU=ctctcttg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999986:4,4:4-4,4-4:18,24,0,6:4,18:2,1|3,5:336.429:366.612,131.36:0.0,0.0:0.0,2.38834e-05,0.999979	0/0:40:0.999988:4,4:4-4,4-4:19,18,0,3:4,19:3,3:267.977:326.675,113.385:0.0,0.0:0.0,2.09661e-05,0.999979
+chr1	7902333	.	CTCTCCTCTCCTCTC	.	.	.	END=7902347;RU=ctctc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999995:3,3:3-3,3-3:19,17,0,0:3,19:NULL:233.639:366.612,131.36:0.0,0.0:0.0,1.28276e-05,0.999987	0/0:37:1.0:3,3:3-3,3-3:22,13,0,2:3,22:2,2:226.959:326.675,113.385:0.0,0.0:0.0,1.32696e-06,1.0
+chr1	7902723	.	CACCCCACCCCACCCCACCC	.	.	.	END=7902742;RU=caccc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999145:4,4:4-4,4-4:13,15,0,3:4,13:3,2|4,1:210.981:366.612,131.36:0.0,0.0:0.0,0.000394074,0.999607	0/0:33:0.999912:4,4:4-4,4-4:16,14,0,3:4,16:3,3:212.011:326.675,113.385:0.0,0.0:0.0,5.59225e-05,0.999947
+chr1	7904296	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7904335;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99201:9,9:8-9,8-9:15,10,0,7:8,2|9,13:4,2|5,1|6,2|7,2:215.141:366.612,131.36:0.169767,0.169767:1.0,0.0,0.0	0/2:33:0.704436:20,21:19-20,18-21:9,7,0,16:19,2|20,5|21,2:5,3|6,2|12,2|13,1|15,1|16,2|17,2|18,1|19,2:238.51:326.675,113.385:0.469854,0.98424:1.38315e-07,0.101529,0.898575
+chr1	7906023	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7906042;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999855:5,5:5-5,5-5:16,12,0,3:5,16:3,2|4,1:194.783:366.612,131.36:0.0,0.0:0.0,6.73828e-05,0.999933	0/0:37:1.0:5,5:5-5,5-5:24,6,0,7:5,24:2,1|3,4|4,2:198.611:326.675,113.385:0.0,0.0:0.0,1.73549e-07,1.0
+chr1	7909399	.	TCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7909410;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:38:0.316243:3,14:3-3,14-16:15,17,0,6:3,15:2,2|14,4:267.265:366.612,131.36:0.0,1.27219:0.0,2.12252e-29,1.0	0/1:16:0.290253:3,14:3-3,3-15:5,9,0,2:3,5:13,1|14,1:119.213:326.675,113.385:0.0,4.03871:2.8659e-27,6.00102e-14,1.0
+chr1	7915045	.	GTGTGTGTGTGT	GTGTGTGTGTGTGT	.	.	END=7915056;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999418:7,7:6-10,6-10:14,23,0,3:7,14:5,1|6,1|7,1:282.392:366.612,131.36:1.3654,1.3654:0.0,8.56386e-05,0.999917	0/0:29:0.965444:6,6:6-8,6-8:9,18,0,0:6,9:NULL:198.063:326.675,113.385:0.856192,0.856192:9.95762e-17,0.0222382,0.977805
+chr1	7926986	.	CAAAACAAAACAAAACAAAACAAAACAAAA	CAAAA	.	.	END=7927015;RU=caaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:56:1.0:6,6:6-6,6-6:27,24,0,5:6,27:2,1|3,2|4,1|5,1:368.58:326.675,113.385:0.0,0.0:0.0,5.05438e-08,1.0
+chr1	7937066	.	ACACACACACACAC	.	.	.	END=7937079;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:22:0.999137:7,7:7-8,7-8:14,5,0,2:7,14:5,2:116.11:326.675,113.385:0.253975,0.253975:5.97146e-25,0.000346904,0.999658
+chr1	7937514	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT	.	.	END=7937567;RU=gt;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:0.848815:27,27:25-27,25-27:7,9,0,12:27,7:4,1|11,1|12,1|13,1|16,2|17,1|19,1|20,1|21,1|23,2:208.109:326.675,113.385:0.669764,0.669764:4.12169e-09,0.0626275,0.937463
+chr1	7939725	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC	.	.	END=7939776;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:46:0.598119:26,26:23-26,23-26:4,21,0,20:26,4:5,1|6,3|7,1|8,1|9,3|11,1|15,1|16,1|18,1|19,1|20,2|21,1|25,2|26,1:369.806:326.675,113.385:1.00893,1.00893:6.09719e-14,0.206923,0.793123
+chr1	7939777	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7939814;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/2:31:0.342097:19,26:19-19,18-27:15,13,0,3:18,2|19,13:18,1|21,1|26,1:228.743:326.675,113.385:0.0,3.06477:5.61739e-33,5.98841e-12,1.0
+chr1	7967867	.	AAACAAACAAACAAACAAAC	.	.	.	END=7967886;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:5,5:5-5,5-5:23,16,0,2:5,23:3,1|4,1:254.919:366.612,131.36:0.0,0.0:0.0,7.37833e-07,1.0	0/0:28:0.997946:5,5:5-5,5-5:12,11,0,5:5,12:2,1|3,1|4,3:180.598:326.675,113.385:0.0,0.0:1.398e-42,0.000923213,0.999081
+chr1	7968753	.	AAGCAAGCAAGC	.	.	.	END=7968764;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999979:3,3:3-3,3-3:18,7,0,0:3,18:NULL:132.608:366.612,131.36:0.0,0.0:0.0,1.75045e-05,0.999986	0/0:15:0.96209:3,3:3-3,3-3:8,7,0,0:3,8:NULL:94.2688:326.675,113.385:0.0,0.0:3.25334e-27,0.0200543,0.979987
+chr1	7969719	.	AAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAAT	.	.	END=7969738;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.999939:6,6:6-6,6-6:17,9,0,3:6,17:3,1|5,2:167.937:366.612,131.36:0.0,0.0:0.0,9.13269e-06,0.999993	0/0:13:0.977978:5,5:5-5,5-5:9,4,0,0:5,9:NULL:72.6275:326.675,113.385:0.0,0.0:3.47392e-30,0.0125675,0.987461
+chr1	7986821	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7986852;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:9,9:9-9,9-9:19,13,0,9:9,19:3,2|5,1|6,3|8,3:265.268:366.612,131.36:0.0,0.0:0.0,1.16032e-06,1.0	0/0:43:0.999515:8,8:8-8,8-8:14,14,0,15:8,14:3,2|4,1|5,5|6,4|7,3:291.605:326.675,113.385:0.0,0.0:2.75757e-38,0.000194398,0.99981
+chr1	8003962	.	TTGTTTGTTTGT	.	.	.	END=8003973;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999578:3,3:3-3,3-3:15,10,0,0:3,15:NULL:156.054:366.612,131.36:0.0,0.0:0.0,0.000284195,0.999719	0/0:16:0.883694:3,3:3-3,3-3:6,10,0,0:3,6:NULL:118.129:326.675,113.385:0.0,0.0:9.06063e-21,0.0639908,0.936099
+chr1	8004898	.	AAGGAAGGAAGG	.	.	.	END=8004909;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:23,25,0,2:3,23:2,2:337.579:366.612,131.36:0.0,0.0:0.0,7.4372e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:213.394:326.675,113.385:0.0,0.0:0.0,8.8998e-06,0.999994
+chr1	8005269	.	TTTATTTATTTA	.	.	.	END=8005280;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:24,30,0,5:3,24:2,5:403.316:366.612,131.36:0.0,0.0:0.0,1.95327e-07,1.0	0/0:36:0.999995:3,3:3-3,3-3:20,16,0,0:3,20:NULL:233.918:326.675,113.385:0.0,0.0:0.0,1.32684e-05,0.999987
+chr1	8005894	.	GTGTGTGTGTGTGT	.	.	.	END=8005907;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.993775:7,7:7-7,7-7:11,10,0,3:7,11:5,1|6,2:160.454:366.612,131.36:0.0,0.0:1.51517e-20,0.00212715,0.997881	0/0:32:0.99969:7,7:7-8,7-8:15,12,0,4:7,15:4,1|6,3:200.321:326.675,113.385:0.270063,0.270063:6.405e-28,0.000103737,0.999896
+chr1	8015093	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG,GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	END=8015152;RU=ggag;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.246659:9,15:9-16,12-16:2,24,0,3:15,2:9,2|14,1:252.076:366.612,131.36:2.22065,1.22596:0.000347671,0.806366,0.193342	2/2:9:0.0494967:12,12:8-12,8-12:0,3,0,6:NULL:3,1|6,1|8,1|11,1|12,2:70.3561:326.675,113.385:1.30046,1.30046:0.676946,0.294354,0.028742
+chr1	8015152	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=8015183;RU=ggaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.993505:8,8:8-10,8-10:12,25,0,0:8,12:NULL:283.844:366.612,131.36:0.817177,0.817177:1.32354e-28,0.00572351,0.994293	0/0:22:0.999814:8,8:8-10,8-10:16,2,0,3:8,16:3,1|7,2:105.387:326.675,113.385:0.797014,0.797014:1.31413e-38,5.16073e-05,0.999949
+chr1	8015590	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8015635;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:17:0.78673:16,17:16-17,16-17:5,7,0,5:16,3|17,2:4,1|6,1|7,1|15,2:131.804:366.612,131.36:0.374147,0.374147:1.0,0.0,0.0	0/3:24:0.654856:23,24:22-23,21-24:11,7,0,5:22,3|23,6|24,2:4,1|5,2|6,1|12,1:164.248:326.675,113.385:0.429525,0.920845:3.63768e-08,0.076716,0.923377
+chr1	8018726	.	CTGCTGCTGCTG	.	.	.	END=8018737;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:255.397:366.612,131.36:0.0,0.0:0.0,6.28587e-07,1.0	0/0:43:1.0:4,4:4-4,4-4:22,21,0,0:4,22:NULL:268.061:326.675,113.385:0.0,0.0:0.0,2.23241e-06,1.0
+chr1	8019993	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8020020;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:0.999518:11,11:10-11,10-11:30,16,0,5:10,4|11,24|12,2:4,1|5,1|7,2|8,1:325.381:366.612,131.36:0.270063,0.270063:1.0,6.34455e-09,0.0	0/0:47:0.999506:14,14:14-15,14-15:26,15,0,6:13,3|14,21|15,2:4,1|5,1|7,1|9,1|12,2:312.639:326.675,113.385:0.195027,0.195027:3.34035e-27,0.000366867,0.999636
+chr1	8023350	.	TGATGATGATGA	.	.	.	END=8023361;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:232.112:366.612,131.36:0.0,0.0:0.0,4.19874e-08,1.0	0/0:32:0.999993:4,4:4-4,4-4:19,13,0,0:4,19:NULL:194.258:326.675,113.385:0.0,0.0:0.0,1.44639e-05,0.999986
+chr1	8028124	.	ACACACACACACACAC	.	.	.	END=8028139;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.246956:8,8:8-8,8-8:2,0,0,0:8,2:NULL:7.97734:366.612,131.36:0.0,0.0:6.89451e-05,0.374285,0.625703	0/0:47:1.0:8,8:8-8,8-8:28,12,0,7:8,28:5,2|6,1|7,4:281.72:326.675,113.385:0.0,0.0:0.0,1.34757e-08,1.0
+chr1	8035149	.	GTGTGTGTGTGTGT	.	.	.	END=8035162;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:7,7:7-7,7-7:20,15,0,2:7,20:5,2:233.838:366.612,131.36:0.139319,0.139319:5.08562e-39,5.57218e-06,0.999995	0/0:49:1.0:7,7:7-7,7-7:30,17,0,2:7,30:6,2:300.087:326.675,113.385:0.0,0.0:0.0,8.81438e-09,1.0
+chr1	8039355	.	GTGGGTGGGTGG	.	.	.	END=8039366;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:1.0:3,3:3-3,3-3:40,25,0,0:3,40:NULL:385.189:366.612,131.36:0.0,0.0:0.0,5.97085e-12,1.0	0/0:66:1.0:3,3:3-3,3-3:51,11,0,4:3,51:2,4:327.464:326.675,113.385:0.0,0.0:0.0,1.1277e-15,1.0
+chr1	8039460	.	ATACATACATACATACATACATAC	ATACATACATACATACATAC	.	.	END=8039483;RU=atac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:5,5:5-5,5-5:30,17,0,7:5,30:2,3|3,1|4,3:325.203:366.612,131.36:0.0,0.0:1.0,3.32293e-09,0.0	0/0:51:1.0:6,6:6-6,6-6:28,15,0,8:6,28:2,2|3,2|4,2|5,2:306.503:326.675,113.385:0.0,0.0:0.0,1.9037e-08,1.0
+chr1	8047704	.	TGGTTGGTTGGT	.	.	.	END=8047715;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:355.566:366.612,131.36:0.0,0.0:0.0,2.55212e-08,1.0	0/0:44:1.0:3,3:3-3,3-3:32,12,0,0:3,32:NULL:233.934:326.675,113.385:0.0,0.0:0.0,1.47459e-09,1.0
+chr1	8053368	.	AAATAAATAAAT	.	.	.	END=8053379;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:219.592:366.612,131.36:0.0,0.0:0.0,1.6413e-06,1.0	0/0:20:0.995495:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.957:326.675,113.385:0.0,0.0:2.08069e-37,0.0027254,0.997283
+chr1	8057815	.	TTTATTTATTTA	.	.	.	END=8057826;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999994:3,3:3-3,3-3:19,11,0,0:3,19:NULL:174.251:366.612,131.36:0.0,0.0:0.0,1.34549e-05,0.999987	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:210.317:326.675,113.385:0.0,0.0:0.0,5.71642e-06,0.999995
+chr1	8058525	.	CTACTACTACTA	.	.	.	END=8058536;RU=cta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:24,13,0,0:4,24:NULL:219.275:366.612,131.36:0.0,0.0:0.0,5.10952e-07,1.0	0/0:34:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:202.493:326.675,113.385:0.0,0.0:0.0,6.14543e-06,0.999995
+chr1	8058938	.	TTGGTTGGTTGG	.	.	.	END=8058949;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:33,17,0,2:3,33:2,2:298.514:366.612,131.36:0.0,0.0:0.0,7.62773e-10,1.0	0/0:45:0.999986:3,3:3-3,3-3:19,26,0,0:3,19:NULL:314.665:326.675,113.385:0.0,0.0:0.0,2.32134e-05,0.999979
+chr1	8061760	.	TTTATTTATTTA	.	.	.	END=8061771;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:203.399:366.612,131.36:0.0,0.0:0.0,9.55518e-06,0.999993	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:209.233:326.675,113.385:0.0,0.0:0.0,1.0808e-07,1.0
+chr1	8063311	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8063358;RU=ct;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.366873:24,24:20-29,20-29:7,9,0,2:23,2|24,5:6,1|12,1:140.755:366.612,131.36:3.03436,3.03436:6.45338e-06,0.549389,0.450712	0/1:32:0.942422:24,25:23-24,23-26:13,11,0,6:23,3|24,7|25,3:5,2|10,1|18,2|24,1:231.017:326.675,113.385:0.253975,0.85905:5.17546e-17,0.0127168,0.987312
+chr1	8063359	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA	.	.	END=8063386;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:26:0.975883:14,18:14-19,16-20:10,10,0,3:14,5|18,3|19,2:5,1|6,1|9,1:178.02:366.612,131.36:1.13054,0.860418:2.49471e-18,7.04711e-09,1.0	0/0:33:0.998811:14,14:13-14,13-14:13,12,0,7:14,13:5,1|7,1|10,2|12,2|13,1:226.441:326.675,113.385:0.253975,0.253975:1.41554e-22,0.000607714,0.999394
+chr1	8066722	.	CATGCATGCATG	.	.	.	END=8066733;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:19,9,0,3:3,19:2,3:177.705:366.612,131.36:0.0,0.0:0.0,2.81014e-06,1.0	0/0:22:0.999638:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.182:326.675,113.385:0.0,0.0:0.0,0.000209397,0.999795
+chr1	8068975	.	ATTCATTCATTC	.	.	.	END=8068986;RU=attc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:274.872:366.612,131.36:0.0,0.0:0.0,8.47198e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:146.035:326.675,113.385:0.0,0.0:0.0,2.6369e-07,1.0
+chr1	8075123	.	CTCCCTCCCTCC	.	.	.	END=8075134;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.99998:3,3:3-3,3-3:18,19,0,4:3,18:2,4:270.132:366.612,131.36:0.0,0.0:0.0,1.23562e-05,0.999987	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:248.856:326.675,113.385:0.0,0.0:0.0,1.1653e-07,1.0
+chr1	8083970	.	GTGTGTGTGTGT	.	.	.	END=8083981;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:6,6:6-6,6-6:28,18,0,2:6,28:4,1|5,1:289.967:366.612,131.36:0.139319,0.139319:0.0,2.06437e-08,1.0	0/0:53:1.0:6,6:6-6,6-6:33,20,0,0:6,33:NULL:306.839:326.675,113.385:0.0,0.0:0.0,1.10416e-09,1.0
+chr1	8091175	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8091222;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.957696:25,26:25-26,25-26:7,9,0,7:25,3|26,4:4,1|6,1|7,1|10,1|11,2|22,1:176.37:366.612,131.36:0.40582,0.236383:1.10855e-12,0.00186889,0.998139	0/0:32:0.641589:24,24:23-24,23-24:13,12,0,7:23,3|24,10:11,1|16,1|17,1|19,3|23,1:225.676:326.675,113.385:0.491073,0.491073:6.05201e-11,0.357067,0.642976
+chr1	8093608	.	AGAAAGAAAGAA	.	.	.	END=8093619;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:188.384:366.612,131.36:0.0,0.0:0.0,4.88905e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:220.726:326.675,113.385:0.0,0.0:0.0,6.07462e-08,1.0
+chr1	8095889	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8095942;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:0.99954:15,15:15-15,15-15:26,23,0,14:14,4|15,22:5,1|8,3|9,1|11,1|12,3|13,3|14,1|15,1:440.902:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/2:69:0.276807:27,36:27-27,9-36:14,20,0,33:26,3|27,9|28,2:5,2|6,1|8,1|9,1|11,3|12,2|13,1|14,1|15,2|16,1|17,1|18,1|19,1|20,1|21,4|22,1|24,1|25,2|26,2|27,1|29,1|30,1|34,1:534.626:326.675,113.385:0.0990099,7.57372:7.14644e-35,2.33556e-10,1.0
+chr1	8098070	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=8098089;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999434:4,4:4-4,4-4:14,27,0,4:4,14:2,1|3,3:319.267:366.612,131.36:0.0,0.0:0.0,0.000306516,0.999697	0/0:31:0.999931:4,4:4-4,4-4:17,12,0,2:4,17:3,2:191.621:326.675,113.385:0.0,0.0:0.0,3.87537e-05,0.999963
+chr1	8099157	.	ATATATATATATATATATATATATATATAT	AT,ATAT	.	.	END=8099186;RU=at;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:8:0.00773839:1,2:1-7,1-7:0,8,0,0:NULL:NULL:69.9445:366.612,131.36:2.05187,2.03604:0.389323,0.503565,0.107215	0/0:14:0.884329:15,15:13-18,13-18:8,2,0,0:15,8:NULL:53.528:326.675,113.385:1.0936,1.0936:4.83461e-07,0.0599293,0.940159
+chr1	8099251	.	TTTGTTTGTTTGTTTG	.	.	.	END=8099266;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:4,4:4-4,4-4:20,7,0,0:4,20:NULL:140.623:366.612,131.36:0.0,0.0:0.0,6.8825e-06,0.999994	0/0:18:0.999251:4,4:4-4,4-4:14,4,0,0:4,14:NULL:88.6924:326.675,113.385:0.0,0.0:1e-45,0.000424862,0.999576
+chr1	8104863	.	AGGAAGGAAGGA	.	.	.	END=8104874;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.99993:3,3:3-3,3-3:17,17,0,2:3,17:2,2:242.556:366.612,131.36:0.0,0.0:0.0,3.98932e-05,0.999963	0/0:52:1.0:3,3:3-3,3-3:23,27,0,2:3,23:2,2:352.532:326.675,113.385:0.0,0.0:0.0,5.92066e-07,1.0
+chr1	8108241	.	TCTTCTTCTTCT	.	.	.	END=8108252;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:32,17,0,0:4,32:NULL:287.673:366.612,131.36:0.0,0.0:0.0,3.52764e-09,1.0	0/0:33:0.999976:4,4:4-4,4-4:19,14,0,0:4,19:NULL:206.848:326.675,113.385:0.0,0.0:0.0,3.39215e-05,0.99997
+chr1	8108409	.	TCTTTCTTTCTT	.	.	.	END=8108420;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:35,21,0,3:3,35:2,3:354.824:366.612,131.36:0.0,0.0:0.0,9.24194e-11,1.0	0/0:46:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:237.13:326.675,113.385:0.0,0.0:0.0,2.04546e-10,1.0
+chr1	8109627	.	ATATATATATATAT	.	.	.	END=8109640;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999854:7,7:7-7,7-7:17,16,0,0:7,17:NULL:222.961:366.612,131.36:0.0,0.0:6.85001e-22,9.72556e-05,0.999903	0/0:30:1.0:7,7:7-7,7-7:20,6,0,2:7,20:4,2:150.079:326.675,113.385:0.0,0.0:7.87813e-26,1.11203e-05,0.999993
+chr1	8111389	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8111422;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:52:0.92424:20,21:20-20,20-21:19,12,0,20:19,3|20,16:5,1|6,2|7,2|8,1|9,3|11,1|12,2|13,2|15,1|16,1|17,2|21,2:374.466:366.612,131.36:0.0,0.298675:0.0,2.51775e-16,1.0	1/0:43:0.771566:13,17:13-17,17-17:15,13,0,15:13,2|16,3|17,10:6,2|8,2|9,2|10,2|11,2|12,3|16,2:324.918:326.675,113.385:1.82038,0.0:4.76351e-10,0.91326,0.0868381
+chr1	8113654	.	TATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=8113685;RU=tatt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.880564:10,10:10-10,10-10:6,11,0,10:10,6:2,1|3,2|5,3|6,2|8,2:199.947:366.612,131.36:0.0,0.0:1.30764e-35,0.0149906,0.985039	0/0:41:0.999572:8,8:7-8,7-8:14,18,0,8:8,14:3,1|4,1|5,2|7,3|8,1:281.979:326.675,113.385:0.345543,0.345543:0.0,0.000167456,0.999834
+chr1	8114127	.	TTGTTTGTTTGT	.	.	.	END=8114138;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:26,17,0,4:3,26:2,4:286.37:366.612,131.36:0.0,0.0:0.0,4.42697e-08,1.0	0/0:30:0.999927:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.804:326.675,113.385:0.0,0.0:0.0,5.3239e-05,0.999948
+chr1	8114704	.	TTAATTAATTAATTAA	.	.	.	END=8114719;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.99981:4,4:4-4,4-4:16,23,0,0:4,16:NULL:277.303:366.612,131.36:0.0,0.0:0.0,0.000160105,0.999842	0/0:26:0.999136:4,4:4-4,4-4:14,12,0,0:4,14:NULL:164.933:326.675,113.385:0.0,0.0:1.562e-42,0.000666524,0.999339
+chr1	8115132	.	AAATAAATAAAT	.	.	.	END=8115143;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999857:3,3:3-3,3-3:17,11,0,0:3,17:NULL:175.865:366.612,131.36:0.0,0.0:0.0,0.000104486,0.999896	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.987:326.675,113.385:0.0,0.0:0.0,2.60132e-07,1.0
+chr1	8115975	.	AGAAAGAAAGAA	.	.	.	END=8115986;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999882:3,3:3-3,3-3:16,14,0,0:3,16:NULL:201.072:366.612,131.36:0.0,0.0:0.0,8.62163e-05,0.999917	0/0:34:1.0:3,3:3-3,3-3:22,12,0,0:3,22:NULL:198.796:326.675,113.385:0.0,0.0:0.0,1.41773e-06,1.0
+chr1	8116438	.	GTTGTTGTTGTTGTT	.	.	.	END=8116452;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999999:5,5:5-5,5-5:18,13,0,3:5,18:4,2|5,1:213.382:366.612,131.36:0.0,0.0:0.0,7.17428e-06,0.999994	0/0:23:0.986297:5,5:5-5,5-5:10,13,0,0:5,10:NULL:158.594:326.675,113.385:0.0,0.0:1.25291e-30,0.00974018,0.990283
+chr1	8119064	.	TTTGTTTGTTTG	.	.	.	END=8119075;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:227.549:366.612,131.36:0.0,0.0:0.0,2.36075e-06,1.0	0/0:39:1.0:3,3:3-3,3-3:29,10,0,0:3,29:NULL:209.031:326.675,113.385:0.0,0.0:0.0,9.50918e-09,1.0
+chr1	8122477	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8122534;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:66:0.963354:19,19:19-20,19-20:18,28,0,19:18,2|19,14|20,2:5,2|7,3|8,1|13,2|14,4|15,1|16,1|17,2|18,3:500.719:366.612,131.36:0.369666,0.369666:1.0,0.0,0.0	0/0:48:0.327823:29,29:27-30,27-30:3,22,0,20:29,3:4,1|5,3|7,2|8,1|10,1|13,1|14,1|15,2|16,1|18,1|19,1|20,3|25,1|27,1:374.998:326.675,113.385:1.16277,1.16277:9.19554e-05,0.424578,0.575422
+chr1	8122771	.	ATCTATCTATCT	.	.	.	END=8122782;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:30,24,0,3:3,30:2,3:360.085:366.612,131.36:0.0,0.0:0.0,4.51023e-09,1.0	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:225.757:326.675,113.385:0.0,0.0:0.0,4.68736e-07,1.0
+chr1	8130079	.	ATCTATCTATCT	.	.	.	END=8130090;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:20,17,0,3:3,20:2,3:256.317:366.612,131.36:0.0,0.0:0.0,2.22684e-06,1.0	0/0:52:1.0:3,3:3-3,3-3:30,20,0,2:3,30:2,2:316.916:326.675,113.385:0.0,0.0:0.0,2.97695e-09,1.0
+chr1	8130171	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8130210;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999032:15,15:15-15,15-15:16,8,0,4:15,16:12,2|13,1|15,1:175.304:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.891619:20,20:18-20,18-20:10,15,0,7:19,2|20,8:6,1|8,1|11,3|12,1|19,1:251.968:326.675,113.385:0.62211,0.62211:3.15234e-10,0.0847739,0.915325
+chr1	8132817	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8132848;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.346622:22,22:20-22,20-22:6,19,0,16:21,2|22,4:4,1|5,1|6,1|7,1|8,3|10,1|11,1|12,2|15,1|17,2|21,2:336.438:366.612,131.36:0.623841,0.623841:0.0,0.0,1.0	0/0:28:0.958789:16,16:15-16,15-16:14,11,0,3:15,3|16,11:11,1|12,1|13,1:192.157:326.675,113.385:0.21692,0.21692:1.2706e-12,0.0390885,0.960981
+chr1	8135933	.	TATTTTATTTTATTT	.	.	.	END=8135947;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999845:3,3:3-3,3-3:16,14,0,0:3,16:NULL:187.842:366.612,131.36:0.0,0.0:0.0,8.98638e-05,0.999911	0/0:17:0.95758:3,3:3-3,3-3:8,9,0,0:3,8:NULL:112.795:326.675,113.385:0.0,0.0:1.3255e-26,0.025304,0.974748
+chr1	8136804	.	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	END=8136863;RU=ttgtt;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.0353704:19,19:12-19,12-19:0,17,0,20:NULL:3,2|4,4|5,1|7,2|8,1|10,3|11,2|13,1|14,1|18,3:295.425:366.612,131.36:1.8477,1.8477:0.0,0.0,1.0	0/0:47:0.999732:12,12:12-12,12-12:15,18,0,14:12,15:3,1|4,4|7,2|8,3|9,1|11,3:335.976:326.675,113.385:0.0,0.0:3e-45,0.000192081,0.999811
+chr1	8138672	.	AGCAGCAGCAGC	.	.	.	END=8138683;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:1.0:4,4:4-4,4-4:34,37,0,3:4,34:3,3:490.06:366.612,131.36:0.0,0.0:0.0,4.72644e-10,1.0	0/0:44:1.0:4,4:4-4,4-4:36,8,0,0:4,36:NULL:220.562:326.675,113.385:0.0,0.0:0.0,1.65479e-10,1.0
+chr1	8149815	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATA	.	.	END=8149860;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.759141:8,8:7-8,7-8:6,9,0,0:8,6:NULL:105.876:366.612,131.36:0.253975,0.253975:1.0,0.0,0.0	0/0:10:0.200773:23,23:22-24,22-24:2,4,0,2:23,2:6,1|12,1:61.958:326.675,113.385:0.828495,0.828495:0.00693742,0.433048,0.560128
+chr1	8152098	.	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	TTTATTTA	.	.	END=8152145;RU=ttta;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.6329:2,2:2-2,2-2:3,9,0,0:2,3:NULL:88.3409:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:27:0.98957:12,12:12-12,12-12:10,8,0,9:12,10:4,1|5,1|6,1|7,1|8,2|10,1|11,2:181.088:326.675,113.385:0.0,0.0:2.07029e-22,0.00534625,0.994669
+chr1	8163528	.	GAGAGGAGAGGAGAG	.	.	.	END=8163542;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999637:3,3:3-3,3-3:15,24,0,0:3,15:NULL:276.149:366.612,131.36:0.0,0.0:1.4e-44,0.000315992,0.999689	0/0:19:0.982968:3,3:3-3,3-3:9,10,0,0:3,9:NULL:130.81:326.675,113.385:0.0,0.0:3.91995e-27,0.0109445,0.989081
+chr1	8167006	.	AATTTAATTTAATTT	.	.	.	END=8167020;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:26,17,0,3:3,26:2,3:278.626:366.612,131.36:0.0,0.0:0.0,7.90845e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:170.283:326.675,113.385:0.0,0.0:0.0,9.03986e-08,1.0
+chr1	8167756	.	ATATATATATATAT	ATATATATATATATAT	.	.	END=8167769;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999899:7,7:7-7,7-7:17,12,0,0:7,17:NULL:188.649:366.612,131.36:0.0,0.0:2.91558e-24,5.57885e-05,0.999948	0/1:14:0.748426:7,8:7-7,7-8:9,5,0,0:7,7|8,2:NULL:86.5737:326.675,113.385:0.0,0.498798:2.74331e-13,0.00406086,0.995952
+chr1	8169940	.	AAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAAT	.	.	END=8169959;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:6,6:6-6,6-6:20,26,0,8:6,20:2,2|3,2|4,3|5,1:374.098:366.612,131.36:0.0,0.0:0.0,2.79208e-06,1.0	0/0:39:1.0:5,5:5-5,5-5:25,10,0,4:5,25:3,2|4,2:223.984:326.675,113.385:0.0,0.0:0.0,1.14854e-07,1.0
+chr1	8172972	.	CTTTCTTTCTTT	.	.	.	END=8172983;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999871:3,3:3-3,3-3:16,9,0,0:3,16:NULL:140.907:366.612,131.36:0.0,0.0:0.0,7.42312e-05,0.999926	0/0:28:0.999983:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.497:326.675,113.385:0.0,0.0:0.0,2.2279e-05,0.999979
+chr1	8173983	.	ATAAATAAATAA	.	.	.	END=8173994;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:20,9,0,2:3,20:2,2:177.08:366.612,131.36:0.0,0.0:0.0,4.86084e-06,0.999995	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.598:326.675,113.385:0.0,0.0:0.0,5.37023e-06,0.999995
+chr1	8174320	.	AGGAAGGAAGGA	.	.	.	END=8174331;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999648:3,3:3-3,3-3:15,12,0,0:3,15:NULL:172.893:366.612,131.36:0.0,0.0:0.0,0.000194825,0.999805	0/0:38:1.0:3,3:2-3,2-3:26,9,0,2:3,26:2,2:199.81:326.675,113.385:0.253975,0.253975:0.0,4.32072e-08,1.0
+chr1	8177036	.	AGGGAGGGAGGG	.	.	.	END=8177047;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999978:3,3:3-3,3-3:18,21,0,0:3,18:NULL:260.815:366.612,131.36:0.0,0.0:0.0,2.8336e-05,0.999972	0/0:22:0.997989:3,3:3-3,3-3:12,10,0,0:3,12:NULL:134.192:326.675,113.385:0.0,0.0:6.5965e-41,0.000969514,0.999035
+chr1	8179090	.	ACACACACACAC	ACACACACACACACAC	.	.	END=8179101;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999393:8,8:8-9,8-9:14,13,0,2:8,14:7,1|8,1:193.538:366.612,131.36:0.311527,0.311527:0.0,9.19338e-05,0.99991	0/0:40:1.0:6,6:6-14,6-14:29,8,0,2:6,29:5,1|6,1:207.577:326.675,113.385:3.72193,3.72193:0.0,5.69252e-09,1.0
+chr1	8183007	.	AAAGAAAGAAAG	.	.	.	END=8183018;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999844:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.479:366.612,131.36:0.0,0.0:0.0,7.54248e-05,0.999926	0/0:19:0.99913:3,3:3-3,3-3:13,6,0,0:3,13:NULL:108.628:326.675,113.385:0.0,0.0:3.9e-44,0.000489509,0.999514
+chr1	8186005	.	GAGAGAGAGAGAGAGAGAGAGAGA	GA	.	.	END=8186028;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0280876:1,1:1-6,1-6:0,20,0,0:NULL:NULL:187.222:366.612,131.36:1.59716,1.59716:0.784559,0.206896,0.00860633	0/0:44:0.962329:12,12:12-14,12-14:17,21,0,5:11,2|12,13|13,2:5,1|6,1|9,3:321.879:326.675,113.385:0.681228,0.681228:4.07662e-16,0.00669391,0.993323
+chr1	8198691	.	AAACAAACAAAC	.	.	.	END=8198702;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:25,27,0,0:3,25:NULL:345.572:366.612,131.36:0.0,0.0:0.0,1.38727e-07,1.0	0/0:61:1.0:3,3:3-3,3-3:38,21,0,2:3,38:2,2:357.131:326.675,113.385:0.0,0.0:0.0,1.73423e-11,1.0
+chr1	8204150	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=8204173;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.911458:6,6:5-6,5-6:7,17,0,3:6,7:3,1|4,2:210.269:366.612,131.36:0.499387,0.499387:1.76364e-24,0.0691695,0.930922	0/0:31:0.999832:6,6:6-6,6-6:16,10,0,5:6,16:3,1|4,4:192.651:326.675,113.385:0.0,0.0:0.0,0.000111831,0.999888
+chr1	8206337	.	CCACCACCACCA	.	.	.	END=8206348;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999348:4,4:4-4,4-4:14,9,0,0:4,14:NULL:132.349:366.612,131.36:0.0,0.0:1.551e-42,0.000394259,0.999606	0/0:32:1.00001:4,4:4-4,4-4:22,10,0,0:4,22:NULL:178.452:326.675,113.385:0.0,0.0:0.0,1.7583e-06,1.0
+chr1	8223406	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8223453;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.864123:18,18:18-18,18-18:7,5,0,0:18,7:NULL:77.959:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:36:0.985847:24,24:24-25,24-25:11,11,0,12:24,11:4,1|5,1|6,4|11,1|14,1|17,1|18,1|21,1|23,1:244.728:326.675,113.385:0.195027,0.195027:3.05043e-12,0.00493001,0.995084
+chr1	8225347	.	TCCCTCCCTCCC	.	.	.	END=8225358;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999401:3,3:3-3,3-3:14,29,0,0:3,14:NULL:311.694:366.612,131.36:0.0,0.0:0.0,0.000475557,0.999529	0/0:43:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:233.175:326.675,113.385:0.0,0.0:0.0,4.43822e-09,1.0
+chr1	8227632	.	TCCTTCCTTCCT	TCCT	.	.	END=8227643;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:43:1.0:3,3:3-3,3-3:30,11,0,2:3,30:2,2:240.348:326.675,113.385:0.0,0.0:0.0,3.05243e-09,1.0
+chr1	8229590	.	TAATAATAATAA	.	.	.	END=8229601;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999907:4,4:4-4,4-4:18,24,0,0:4,18:NULL:291.457:366.612,131.36:0.0,0.0:0.0,7.27538e-05,0.999927	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:165.956:326.675,113.385:0.0,0.0:0.0,1.92415e-06,1.0
+chr1	8234581	.	CTCTCTCTCTCTCT	CT	.	.	END=8234594;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:39:0.999659:7,7:6-7,6-7:24,11,0,3:6,2|7,22:5,2|6,1:229.004:326.675,113.385:0.294378,0.294378:1e-45,0.000343236,0.999659
+chr1	8242991	.	TTGTTGTTGTTGTTG	TTG	.	.	END=8243005;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:31:0.999806:5,5:5-5,5-5:15,13,0,3:5,15:4,3:199.113:326.675,113.385:0.0,0.0:1.78e-43,0.000116566,0.999887
+chr1	8246899	.	AAGCAAGCAAGCAAGC	.	.	.	END=8246914;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999315:4,4:4-4,4-4:14,9,0,0:4,14:NULL:145.545:366.612,131.36:0.0,0.0:0.0,0.000468451,0.999537	0/0:48:1.0:4,4:4-4,4-4:30,15,0,3:4,30:2,1|3,2:274.711:326.675,113.385:0.0,0.0:0.0,5.01533e-09,1.0
+chr1	8246965	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	END=8247014;RU=aagaa;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.7408:8,8:8-8,8-8:5,2,0,0:8,5:NULL:39.8858:366.612,131.36:0.0,0.0:0.922423,0.0776716,9.9957e-14	0/0:40:0.898434:10,10:7-10,7-10:6,16,0,17:10,6:3,1|4,2|5,3|6,2|7,2|8,5|9,2:289.122:326.675,113.385:1.44541,1.44541:3.21687e-14,0.052063,0.948018
+chr1	8266031	.	GTGGTGGTGGTG	.	.	.	END=8266042;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:24,11,0,0:4,24:NULL:196.125:366.612,131.36:0.0,0.0:0.0,6.85821e-07,1.0	0/0:23:0.997056:4,4:4-4,4-4:12,11,0,0:4,12:NULL:151.09:326.675,113.385:0.0,0.0:2.38039e-40,0.00193777,0.99807
+chr1	8266249	.	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	CAAAA	.	.	END=8266303;RU=caaaa;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0719045:1,1:1-2,1-2:0,14,0,0:NULL:NULL:126.948:366.612,131.36:0.253975,0.253975:0.901064,0.0980899,0.000948109	0/0:32:0.985697:11,11:11-11,11-11:11,13,0,8:11,11:3,1|4,2|5,2|6,2|8,1:230.731:326.675,113.385:0.0,0.0:4.34179e-34,0.0130186,0.987009
+chr1	8266615	.	ACACACACACACACACACACACACACACACACACACACAC	ACAC,ACACAC,ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8266654;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:12:0.0212688:2,3:1-3,1-4:0,12,0,0:NULL:NULL:107.779:366.612,131.36:0.622425,0.8247:0.721107,0.265612,0.0133016	0/3:37:0.629295:20,21:19-20,19-21:16,11,0,10:19,4|20,9|21,3:4,1|7,2|11,1|13,1|14,1|15,1|16,1|19,2:266.552:326.675,113.385:0.253975,0.783868:6.61717e-12,0.131809,0.868288
+chr1	8277000	.	ACCCACCCACCC	.	.	.	END=8277011;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.285533:3,3:3-3,3-3:2,0,0,0:3,2:NULL:7.81672:366.612,131.36:0.0,0.0:1.6909e-06,0.28606,0.713946	0/0:23:0.932852:3,3:3-3,3-3:7,16,0,0:3,7:NULL:175.271:326.675,113.385:0.0,0.0:2.30008e-19,0.0474448,0.952631
+chr1	8279683	.	CTCTCTCTCTCT	CTCTCTCTCTCTCT	.	.	END=8279694;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999973:7,7:7-8,7-8:18,17,0,2:7,18:5,1|6,1:241.681:366.612,131.36:0.309,0.309:0.0,1.18429e-05,0.999987	0/0:46:1.0:6,6:6-6,6-6:31,15,0,0:6,31:NULL:262.196:326.675,113.385:0.0,0.0:0.0,5.96934e-09,1.0
+chr1	8279713	.	TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC	TCCTC	.	.	END=8279762;RU=tcctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0751248:1,1:1-2,1-2:0,15,0,0:NULL:NULL:131.48:366.612,131.36:0.195027,0.195027:0.893997,0.104919,0.00118645	0/0:48:0.892845:10,10:3-10,3-10:8,20,0,18:10,8:2,4|3,3|4,3|5,1|6,4|7,2|8,1:347.23:326.675,113.385:2.778,2.778:1.45748e-16,0.0949286,0.905171
+chr1	8280732	.	CACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=8280753;RU=ca;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.287648:25,25:23-26,23-26:2,13,0,18:25,2:6,1|7,2|9,2|10,2|13,2|14,1|15,2|16,1|20,1|21,1|23,2|24,1:272.998:366.612,131.36:1.32466,1.32466:0.0,0.0,1.0	0/0:32:0.929785:11,11:11-12,11-12:21,6,0,4:11,18|12,3:5,2|6,1|10,1:187.392:326.675,113.385:0.398507,0.398507:3.70661e-29,5.56129e-06,0.999995
+chr1	8282353	.	GGGTGGGTGGGT	.	.	.	END=8282364;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.468139:3,3:1-3,1-3:3,16,0,0:3,3:NULL:153.316:366.612,131.36:0.442786,0.442786:3.80222e-09,0.316452,0.683557	0/0:27:0.987199:3,3:3-3,3-3:10,17,0,0:3,10:NULL:188.791:326.675,113.385:0.0,0.0:2.35018e-28,0.00808223,0.991936
+chr1	8290480	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=8290543;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.996497:14,14:6-14,6-14:12,18,0,17:14,12:3,1|5,1|6,2|8,2|9,4|10,3|11,1|12,3:344.02:366.612,131.36:3.27122,3.27122:0.999507,0.000495853,6.86637e-24	0/0:45:0.997484:16,16:16-16,16-16:12,15,0,18:16,12:3,2|5,1|6,2|8,3|9,2|10,3|13,1|15,3|16,1:324.595:326.675,113.385:0.0,0.0:1.61841e-34,0.000532592,0.999469
+chr1	8290943	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=8291032;RU=tct;PERIOD=3;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0418623:28,28:18-28,18-28:0,6,0,12:NULL:7,1|9,1|11,1|16,2|17,1|18,1|22,2|23,1|27,2:147.29:366.612,131.36:3.92719,3.92719:0.730439,0.253303,0.0162825	0/0:31:0.280789:30,30:26-30,26-30:3,9,0,17:30,3:5,2|6,1|8,1|9,3|12,1|14,2|16,1|19,1|20,1|21,1|23,2|28,1:227.676:326.675,113.385:1.32066,1.32066:5.78395e-06,0.449715,0.550385
+chr1	8293500	.	TGGTGGTGGTGG	.	.	.	END=8293511;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:27,21,0,0:4,27:NULL:299.948:366.612,131.36:0.0,0.0:0.0,9.36759e-08,1.0	0/0:32:0.999984:4,4:4-4,4-4:19,13,0,0:4,19:NULL:192.347:326.675,113.385:0.0,0.0:0.0,2.57329e-05,0.999978
+chr1	8295438	.	CTGCCTGCCTGC	.	.	.	END=8295449;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:26,22,0,3:3,26:2,3:329.686:366.612,131.36:0.0,0.0:0.0,5.76648e-08,1.0	0/0:20:0.997312:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.932:326.675,113.385:0.0,0.0:2.08556e-37,0.00150062,0.998504
+chr1	8296427	.	GGTAGGTAGGTA	.	.	.	END=8296438;RU=ggta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:194.976:366.612,131.36:0.0,0.0:0.0,5.29213e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.415:326.675,113.385:0.0,0.0:0.0,1.54454e-07,1.0
+chr1	8303139	.	ACCACCACCACCACCACC	.	.	.	END=8303156;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999833:6,6:6-6,6-6:16,11,0,0:6,16:NULL:168.394:366.612,131.36:0.0,0.0:0.0,0.000115779,0.999887	0/0:26:0.999411:6,6:4-6,4-6:14,7,0,4:6,14:4,3|5,1:145.61:326.675,113.385:0.851255,0.851255:3.77311e-40,0.000251334,0.99975
+chr1	8303362	.	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	.	.	END=8303409;RU=ataa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999021:11,11:11-11,11-11:13,14,0,10:11,13:2,1|3,1|4,2|7,1|8,1|9,1|10,3:254.298:366.612,131.36:0.0,0.0:0.999378,0.000625603,1.9791e-22	0/0:24:0.571462:12,12:11-14,11-14:4,9,0,8:12,4:3,1|6,1|7,1|8,3|9,1|11,1:157.02:326.675,113.385:1.11535,1.11535:6.3577e-09,0.241148,0.758872
+chr1	8303901	.	AACAACAACAACAAC	AACAACAACAACAACAAC	.	.	END=8303915;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:1.0:5,6:5-5,6-6:23,13,0,0:5,16|6,7:NULL:229.551:366.612,131.36:0.0,0.172061:0.0,1.36785e-17,1.0	0/0:24:0.997124:5,5:5-5,5-5:12,10,0,2:5,12:4,2:160.303:326.675,113.385:0.0,0.0:7.74398e-31,0.00124512,0.998761
+chr1	8314805	.	AATAAAATAAAATAA	.	.	.	END=8314819;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:23,17,0,0:3,23:NULL:246.085:366.612,131.36:0.0,0.0:0.0,4.89499e-07,1.0	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:138.841:326.675,113.385:0.0,0.0:0.0,1.05149e-05,0.999993
+chr1	8314957	.	CACAACACAACACAA	.	.	.	END=8314971;RU=cacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:235.946:366.612,131.36:0.0,0.0:0.0,2.10711e-06,1.0	0/0:29:0.999999:3,3:3-3,3-3:18,9,0,2:3,18:2,1|3,1:165.01:326.675,113.385:0.0,0.0:0.0,7.22613e-06,0.999994
+chr1	8316961	.	TATATATATATATA	TATATATATA	.	.	END=8316974;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:1.00001:5,5:5-5,5-5:22,16,0,0:5,22:NULL:231.619:366.612,131.36:0.0,0.0:1.0,6.09319e-07,0.0	0/0:21:0.999463:7,7:7-8,7-8:15,5,0,0:7,15:NULL:108.023:326.675,113.385:0.195027,0.195027:4.76262e-23,0.000320093,0.999682
+chr1	8321168	.	TTTGTTTGTTTG	.	.	.	END=8321179;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999991:3,3:3-3,3-3:18,23,0,4:3,18:2,4:300.988:366.612,131.36:0.0,0.0:0.0,1.71594e-05,0.999986	0/0:26:0.93009:3,3:3-3,3-3:6,15,0,5:3,6:2,5:193.937:326.675,113.385:0.0,0.0:1.02792e-20,0.0346144,0.965449
+chr1	8322155	.	CAACAACAACAACAA	CAACAACAACAA	.	.	END=8322169;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.999751:4,4:4-4,4-4:16,7,0,0:4,16:NULL:128.369:366.612,131.36:0.0,0.0:0.999888,0.000111333,1.484e-42	0/0:33:1.0:5,5:5-5,5-5:24,7,0,2:5,24:3,1|4,1:173.71:326.675,113.385:0.0,0.0:0.0,2.6353e-07,1.0
+chr1	8322582	.	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	.	.	END=8322666;RU=tctgt;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.331779:13,13:10-13,10-13:3,13,0,0:13,3:NULL:137.248:366.612,131.36:1.20206,1.20206:1.0,0.0,0.0	0/0:48:0.889489:17,17:17-17,17-17:6,23,0,19:17,6:2,1|3,1|5,1|6,2|7,3|9,1|10,1|11,1|12,3|13,1|15,1|16,2|17,1:381.173:326.675,113.385:0.278639,0.278639:2.99727e-17,0.0723204,0.927774
+chr1	8325886	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=8325921;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:1.0:8,8:8-8,8-8:26,19,0,7:8,26:2,1|3,1|5,1|6,2|7,2:332.825:366.612,131.36:0.0,0.0:1.0,1.00529e-07,3e-45	0/0:31:0.985159:9,9:8-9,8-9:9,13,0,8:9,9:2,1|4,1|6,1|7,4|8,1:214.639:326.675,113.385:0.45695,0.45695:5.96041e-20,0.00861212,0.991405
+chr1	8328000	.	CAACAACAACAA	.	.	.	END=8328011;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:225.419:366.612,131.36:0.0,0.0:0.0,4.10969e-07,1.0	0/0:35:1.0:4,4:4-4,4-4:20,15,0,0:4,20:NULL:214.427:326.675,113.385:0.0,0.0:0.0,7.2502e-06,0.999994
+chr1	8329731	.	ATAAATAAATAA	.	.	.	END=8329742;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:35,24,0,0:3,35:NULL:359.0:366.612,131.36:0.0,0.0:0.0,2.54448e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:30,14,0,0:3,30:NULL:246.505:326.675,113.385:0.0,0.0:0.0,5.56693e-09,1.0
+chr1	8330089	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8330126;RU=ag;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.835824:20,20:20-20,20-20:6,7,0,3:20,6:7,1|12,1|19,1:115.104:366.612,131.36:0.0,0.0:2.33946e-18,0.027077,0.972978	0/0:30:0.705345:19,19:19-20,19-20:12,12,0,6:19,10|20,2:4,1|8,1|9,1|11,1|13,1|16,1:216.776:326.675,113.385:0.452422,0.452422:1.00315e-13,0.00259924,0.997406
+chr1	8331327	.	TGTCTGTCTGTC	.	.	.	END=8331338;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:3,3:3-3,3-3:23,24,0,2:3,23:2,2:322.453:366.612,131.36:0.0,0.0:0.0,6.30554e-07,1.0	0/0:38:1.00001:3,3:3-3,3-3:21,13,0,4:3,21:2,4:233.26:326.675,113.385:0.0,0.0:0.0,1.12939e-06,1.0
+chr1	8332124	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8332161;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:44:0.725266:25,26:24-27,25-27:4,20,0,18:25,2|26,2:5,1|7,1|8,1|9,1|10,1|14,1|15,2|18,2|19,1|20,2|23,2|24,1|25,2:345.674:366.612,131.36:0.986131,0.685675:0.0,0.0,1.0	0/1:52:0.317539:19,24:19-19,19-25:16,20,0,16:18,2|19,14:4,1|6,2|8,1|9,1|11,2|12,1|14,3|15,1|17,1|18,1|19,1|24,1:396.996:326.675,113.385:0.0,2.71258:4.67477e-25,7.44892e-06,0.999994
+chr1	8333431	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	END=8333470;RU=tttgt;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:58:0.999958:7,7:7-7,7-7:17,27,0,14:7,17:2,1|3,5|4,2|5,1|6,5:417.359:366.612,131.36:0.0,0.0:0.999986,1.70365e-05,4.73916e-37	0/0:42:0.999865:8,8:8-9,8-9:16,15,0,10:8,16:3,2|4,3|6,2|7,3:282.05:326.675,113.385:0.382696,0.382696:0.0,7.31916e-05,0.999926
+chr1	8334958	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=8334981;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.0:5,5:5-5,5-5:25,14,0,5:5,25:3,4|4,1:264.435:366.612,131.36:0.0,0.0:1.0,2.64791e-07,0.0	0/0:34:0.571229:6,6:5-6,5-6:20,6,0,8:5,3|6,17:3,2|4,2|5,4:204.081:326.675,113.385:0.469019,0.469019:1.44932e-37,0.428869,0.571225
+chr1	8338614	.	ATAAATAAATAAATAAATAA	ATAAATAAATAAATAA	.	.	END=8338633;RU=ataa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.00001:4,4:4-4,4-4:21,15,0,3:4,21:2,2|3,1:246.6:366.612,131.36:0.0,0.0:1.0,2.3266e-06,0.0	0/0:32:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:2,1|3,2|4,1:178.83:326.675,113.385:0.0,0.0:0.0,2.26863e-06,1.0
+chr1	8338698	.	AATAATAATAAT	.	.	.	END=8338709;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:31,5,0,0:4,31:NULL:170.937:366.612,131.36:0.0,0.0:0.0,3.20903e-09,1.0	0/0:24:0.999899:4,4:4-4,4-4:17,7,0,0:4,17:NULL:129.851:326.675,113.385:0.0,0.0:0.0,7.15077e-05,0.999932
+chr1	8339191	.	CTGTGCTGTGCTGTG	.	.	.	END=8339205;RU=ctgtg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:36,21,0,2:3,36:2,2:353.993:366.612,131.36:0.0,0.0:0.0,4.50307e-11,1.0	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.963:326.675,113.385:0.0,0.0:0.0,6.85317e-06,0.999994
+chr1	8339827	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8339862;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.841567:13,13:11-13,11-13:6,3,0,4:13,6:4,1|10,1|11,1|12,1:87.0629:366.612,131.36:0.739465,0.739465:1.0,0.0,0.0	0/0:28:0.980216:18,18:14-19,14-19:10,6,0,8:18,10:6,2|7,1|9,2|12,2|17,1:159.194:326.675,113.385:1.50632,1.50632:4.74857e-16,0.00819059,0.99183
+chr1	8339980	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8340019;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:9:0.168409:22,22:19-22,19-22:2,6,0,0:22,2:NULL:68.9241:366.612,131.36:0.724736,0.724736:9.0371e-05,0.253796,0.746121	1/0:13:0.601332:19,20:19-21,20-21:5,5,0,2:19,2|20,3:4,1|11,1:85.3542:326.675,113.385:0.753387,0.40582:0.0111203,0.695401,0.293511
+chr1	8345278	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=8345305;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.99932:10,10:10-10,10-10:14,18,0,7:10,14:3,2|5,1|6,1|7,2|8,1:276.122:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:42:1.0:7,7:6-7,6-7:23,10,0,6:7,23:4,1|5,1|6,4:239.707:326.675,113.385:0.29703,0.29703:0.0,4.11408e-07,1.0
+chr1	8353434	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=8353449;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.997514:5,5:5-5,5-5:12,10,0,0:5,12:NULL:140.318:366.612,131.36:0.0,0.0:0.0,0.00119794,0.998807	0/0:26:0.999895:4,4:4-4,4-4:17,9,0,0:4,17:NULL:151.271:326.675,113.385:0.0,0.0:9.70261e-38,8.64309e-05,0.999917
+chr1	8354049	.	AAGCAAGCAAGC	.	.	.	END=8354060;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999679:3,3:3-3,3-3:15,16,0,0:3,15:NULL:195.511:366.612,131.36:0.0,0.0:0.0,0.000194791,0.999805	0/0:13:0.945666:3,3:3-3,3-3:7,4,0,2:3,7:2,2:78.2415:326.675,113.385:0.0,0.0:2.55084e-23,0.0192365,0.980801
+chr1	8357311	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8357328;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.979753:9,9:8-9,8-9:19,16,0,0:8,2|9,17:NULL:234.28:366.612,131.36:0.390807,0.390807:8.54647e-27,0.0202936,0.979746	0/0:43:1.0:9,9:9-9,9-9:26,12,0,4:9,26:6,1|7,1|8,2:242.065:326.675,113.385:0.0,0.0:0.0,6.70531e-08,1.0
+chr1	8366194	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8366227;RU=ct;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.236521:26,26:23-26,23-26:2,18,0,13:26,2:5,3|11,1|13,1|17,2|18,2|22,3|23,1:278.578:366.612,131.36:1.449,1.449:0.0,0.0,1.0	0/0:43:0.763277:17,17:16-17,16-17:21,12,0,8:16,6|17,15:4,1|9,2|11,1|12,1|13,1|14,1|16,1:277.096:326.675,113.385:0.696878,0.696878:3.64364e-12,0.236711,0.763312
+chr1	8366995	.	ATATATATATATATATATATATATATATATATAT	ATATATATATATATATAT	.	.	END=8367028;RU=at;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0306099:9,9:9-14,9-14:0,11,0,2:NULL:4,1|9,1:114.917:366.612,131.36:1.76671,1.76671:0.881275,0.115555,0.00327874	0/0:8:0.729332:17,17:17-17,17-17:6,2,0,0:17,6:NULL:46.4011:326.675,113.385:0.0,0.0:1.36574e-06,0.105537,0.894565
+chr1	8371543	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=8371606;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:13:0.926383:16,17:16-17,16-17:5,6,0,2:16,2|17,3:10,1|15,1:99.6572:366.612,131.36:0.429525,0.290354:4.86265e-08,0.0197682,0.980273	0/0:21:0.685203:16,16:16-16,16-16:5,8,0,8:16,5:5,2|7,1|10,1|11,2|12,1|14,1:155.276:326.675,113.385:0.19802,0.19802:1.05189e-07,0.206014,0.794033
+chr1	8374412	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=8374432;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:7,7:7-7,7-7:19,12,0,5:7,19:4,2|5,2|6,1:221.878:366.612,131.36:0.0,0.0:0.0,8.39317e-06,0.999994	0/0:33:0.999219:7,7:7-7,7-7:13,14,0,6:7,13:3,1|4,2|6,3:226.934:326.675,113.385:0.0,0.0:4.64972e-32,0.000408752,0.999592
+chr1	8374431	.	TGATGATGATGATGATGA	.	.	.	END=8374448;RU=tga;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:6,6:6-6,6-6:21,13,0,4:6,21:3,1|4,2|5,1:227.019:366.612,131.36:0.0,0.0:0.0,1.39271e-06,1.0	0/0:34:0.999992:6,6:6-6,6-6:18,11,0,5:6,18:3,1|4,3|5,1:213.13:326.675,113.385:0.0,0.0:0.0,1.50354e-05,0.999986
+chr1	8378065	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	.	END=8378114;RU=tcttt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.753591:10,10:10-10,10-10:5,9,0,5:10,5:3,1|4,1|7,2|9,1:143.055:366.612,131.36:0.139319,0.139319:3.18022e-16,0.130091,0.870006	0/0:22:0.902909:10,10:9-10,9-10:7,8,0,6:10,7:2,1|3,1|5,1|6,1|7,1|8,1:149.552:326.675,113.385:0.607117,0.607117:1.93876e-22,0.0627019,0.937389
+chr1	8383454	.	TAATTAATTAATTAAT	TAATTAATTAAT	.	.	END=8383469;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.700614:3,4:3-4,4-4:17,13,0,0:3,2|4,15:NULL:198.121:366.612,131.36:0.499975,0.0:1.21728e-38,0.700637,0.29937	0/0:24:0.999182:4,4:4-4,4-4:14,10,0,0:4,14:NULL:152.232:326.675,113.385:0.0,0.0:1.50491e-40,0.000573469,0.999431
+chr1	8384813	.	TGTGTGTGTGTG	.	.	.	END=8384824;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.998269:6,6:5-6,5-6:26,17,0,2:5,3|6,23:5,2:287.022:366.612,131.36:0.311527,0.311527:0.0,0.00173601,0.998269	0/0:44:1.0:6,6:6-6,6-6:26,17,0,0:6,26:NULL:264.41:326.675,113.385:0.139319,0.139319:0.0,1.56232e-07,1.0
+chr1	8389556	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=8389603;RU=tatc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:59:0.571161:11,12:11-11,11-12:15,26,0,18:11,15:3,2|4,2|5,3|6,1|7,4|8,1|10,2|11,2|12,1:446.744:366.612,131.36:0.0,0.48221:0.00027855,0.999721,9.60695e-16	0/0:41:0.966978:12,12:11-12,11-12:8,19,0,13:12,8:3,3|5,2|8,3|10,2|11,3:308.233:326.675,113.385:0.419363,0.419363:6.27891e-11,0.0183287,0.981709
+chr1	8389896	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	.	END=8389935;RU=atct;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.981228:10,10:10-10,10-10:9,20,0,14:10,9:2,2|3,1|4,3|5,2|6,2|8,2|9,2:327.676:366.612,131.36:0.19802,0.19802:4.86114e-22,0.01021,0.989813	0/0:51:0.999886:10,10:10-10,10-10:16,22,0,13:10,16:4,3|5,1|6,2|7,2|8,2|9,3:363.177:326.675,113.385:0.0,0.0:4.44127e-38,8.00208e-05,0.999924
+chr1	8389961	.	TTTGTTTGTTTG	.	.	.	END=8389972;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:218.76:366.612,131.36:0.0,0.0:0.0,2.83242e-06,1.0	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:348.37:326.675,113.385:0.0,0.0:0.0,3.40439e-08,1.0
+chr1	8409196	.	AAAAACAAAAACAAAAAC	.	.	.	END=8409213;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.783:366.612,131.36:0.0,0.0:0.0,4.60431e-08,1.0	0/0:14:0.983591:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.7495:326.675,113.385:0.0,0.0:3.68951e-30,0.00828025,0.991741
+chr1	8410948	.	CGCTCGCTCGCT	.	.	.	END=8410959;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99408:3,3:3-3,3-3:11,15,0,0:3,11:NULL:183.329:366.612,131.36:0.0,0.0:2.54557e-38,0.00344241,0.996565	0/0:64:1.0:3,3:3-3,3-3:39,19,0,6:3,39:2,6:366.886:326.675,113.385:0.0,0.0:0.0,6.181e-12,1.0
+chr1	8413506	.	TTATTTATTTAT	.	.	.	END=8413517;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:176.382:366.612,131.36:0.0,0.0:0.0,3.84885e-07,1.0	0/0:22:0.999463:3,3:3-3,3-3:14,8,0,0:3,14:NULL:128.065:326.675,113.385:0.0,0.0:0.0,0.000323489,0.999681
+chr1	8415286	.	AAACAAACAAACAAACAAAC	.	.	.	END=8415305;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999777:5,5:5-5,5-5:15,21,0,6:5,15:2,1|3,2|4,3:303.295:366.612,131.36:0.0,0.0:0.0,9.65488e-05,0.999903	0/0:43:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:2,1|3,5|4,1:263.434:326.675,113.385:0.0,0.0:0.0,8.23304e-07,1.0
+chr1	8418293	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=8418328;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:8,8:8-8,8-8:19,22,0,9:8,19:3,1|4,3|5,4|7,1:347.812:366.612,131.36:0.139319,0.139319:0.999995,4.34615e-06,1.75392e-34	0/0:44:1.0:9,9:9-9,9-9:24,13,0,6:9,24:3,1|4,1|6,1|7,1|8,2:265.715:326.675,113.385:0.0,0.0:0.0,3.37734e-07,1.0
+chr1	8419081	.	AAATAAATAAAT	.	.	.	END=8419092;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:220.143:366.612,131.36:0.0,0.0:0.0,4.41593e-06,0.999995	0/0:30:0.999885:3,3:2-3,2-3:16,13,0,0:3,16:NULL:178.943:326.675,113.385:0.419363,0.419363:0.0,7.18237e-05,0.999932
+chr1	8420846	.	AAATAAATAAAT	.	.	.	END=8420857;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.937:366.612,131.36:0.0,0.0:0.0,3.35584e-06,1.0	0/0:28:0.999923:3,3:3-3,3-3:17,11,0,0:3,17:NULL:163.458:326.675,113.385:0.0,0.0:0.0,4.61361e-05,0.999956
+chr1	8423083	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8423108;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.172272:21,21:18-22,18-22:2,4,0,2:21,2:11,1|14,1:60.6674:366.612,131.36:0.881911,0.881911:0.0,0.0,1.0	0/0:20:0.596815:13,13:11-14,11-14:14,6,0,0:11,2|12,2|13,8|14,2:NULL:135.215:326.675,113.385:0.827074,0.827074:9.63291e-06,0.326822,0.673181
+chr1	8424107	.	CCAGCCAGCCAG	.	.	.	END=8424118;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:211.855:366.612,131.36:0.0,0.0:0.0,2.95663e-07,1.0	0/0:27:1.00001:3,3:3-3,3-3:22,5,0,0:3,22:NULL:132.923:326.675,113.385:0.0,0.0:0.0,9.49426e-07,1.0
+chr1	8433296	.	TATTTATTTATT	.	.	.	END=8433307;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:177.46:366.612,131.36:0.0,0.0:0.0,5.30392e-08,1.0	0/0:10:0.980539:3,3:3-3,3-3:9,1,0,0:3,9:NULL:45.09:326.675,113.385:0.0,0.0:1.04721e-29,0.00803098,0.991988
+chr1	8433511	.	TATATATATATATATATATA	TATATATATATATATATA,TATATATATATATATATATATA	.	.	END=8433530;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.973682:9,9:8-9,8-9:19,22,0,0:8,3|9,16:NULL:292.357:366.612,131.36:0.438559,0.438559:0.999979,2.24515e-05,6.28827e-20	2/2:10:0.143587:11,11:8-11,8-11:2,5,0,0:11,2:NULL:53.8357:326.675,113.385:0.842923,0.842923:0.000431743,0.502089,0.497491
+chr1	8433926	.	TATATATATATA	.	.	.	END=8433937;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999997:6,6:6-7,6-7:19,12,0,0:6,19:NULL:189.643:366.612,131.36:0.169767,0.169767:1.64088e-30,1.25063e-05,0.999987	0/0:22:0.999781:6,6:6-6,6-6:16,5,0,0:6,16:NULL:109.602:326.675,113.385:0.139319,0.139319:9.12765e-26,0.000111527,0.999888
+chr1	8456266	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8456293;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.155711:16,16:16-27,16-27:2,4,0,0:16,2:NULL:47.4802:366.612,131.36:5.3798,5.3798:6.48768e-08,0.0609947,0.939094	0/0:29:0.99989:14,14:11-14,11-14:17,4,0,7:14,17:4,1|5,1|8,1|9,1|10,2|13,1:166.18:326.675,113.385:1.00465,1.00465:4.58367e-29,4.43602e-05,0.999956
+chr1	8470720	.	TCTCTCTCTCTCTC	.	.	.	END=8470733;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.16141:7,7:7-24,7-24:22,13,0,2:7,22:5,1|21,1:239.062:366.612,131.36:8.06485,8.06485:0.0,2.46782e-07,1.0	0/0:34:0.999993:7,7:7-7,7-7:19,15,0,0:7,19:NULL:221.843:326.675,113.385:0.0,0.0:8.84e-43,1.81607e-05,0.999985
+chr1	8470767	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8470826;RU=ct;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.892976:22,22:22-22,22-22:8,12,0,5:22,8:6,1|18,1|19,1|21,2:184.724:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/2:21:0.0222805:26,26:25-29,25-29:0,11,0,8:NULL:6,3|7,1|11,1|15,1|16,1|17,1:174.168:326.675,113.385:1.64368,1.64368:0.722255,0.257109,0.0206627
+chr1	8470857	.	CTCTCTCTCTCTCTCT	.	.	.	END=8470872;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999933:8,8:8-8,8-8:18,18,0,0:8,18:NULL:233.544:366.612,131.36:0.0990099,0.0990099:3.36816e-33,4.64844e-05,0.999956	0/0:27:0.868555:8,8:8-8,8-8:6,18,0,3:8,6:6,3:216.942:326.675,113.385:0.0,0.0:1.3158e-11,0.0731223,0.926973
+chr1	8477191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8477250;RU=ga;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:19:0.0277315:32,32:31-34,31-34:0,9,0,7:NULL:7,1|11,1|14,1|18,1|26,1|31,1|32,1:140.727:366.612,131.36:1.27412,1.27412:2.35232e-16,0.152828,0.84725	1/0:19:0.513868:29,30:23-30,23-30:4,9,0,5:29,2|30,2:7,1|12,1|15,1|18,1|19,1:147.648:326.675,113.385:1.81115,1.95434:0.0172261,0.766209,0.216644
+chr1	8480096	.	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	.	.	END=8480191;RU=agaaagga;PERIOD=8;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:24:0.998877:7,12:4-9,11-12:6,8,0,6:7,2|12,4:3,2|6,1|8,2|10,1:150.18:366.612,131.36:1.54513,0.456091:4.45744e-11,1.0,6.69644e-08	1/3:35:0.364967:6,10:6-11,9-11:4,11,0,18:6,4:2,1|3,2|4,1|5,2|6,3|7,1|8,1|9,5|10,2:242.488:326.675,113.385:0.899956,0.56427:0.61593,0.38413,1.79851e-19
+chr1	8496447	.	TCTCTCTCTCTC	TCTCTCTCTCTCTC	.	.	END=8496458;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.998725:7,7:5-7,5-7:14,14,0,0:7,14:NULL:191.968:366.612,131.36:0.863148,0.863148:0.0,0.000871573,0.999134	0/0:28:1.00001:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.068:326.675,113.385:0.0,0.0:7e-45,3.71249e-06,1.0
+chr1	8498887	.	TGTGTGTGTGTG	.	.	.	END=8498898;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:6,6:6-6,6-6:22,19,0,5:6,22:4,1|5,4:293.567:366.612,131.36:0.0,0.0:0.0,5.43531e-07,1.0	0/0:23:0.999971:6,6:6-6,6-6:18,5,0,0:6,18:NULL:113.239:326.675,113.385:0.0,0.0:8.34546e-39,2.40389e-05,0.999979
+chr1	8500395	.	AGGAAGGAAGGA	.	.	.	END=8500406;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.263:366.612,131.36:0.0,0.0:0.0,6.90293e-07,1.0	0/0:27:0.999531:3,3:3-3,3-3:14,11,0,2:3,14:2,2:170.995:326.675,113.385:0.0,0.0:0.0,0.000248712,0.999751
+chr1	8503531	.	TAAATAAATAAA	.	.	.	END=8503542;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999993:3,3:3-3,3-3:19,16,0,0:3,19:NULL:221.348:366.612,131.36:0.0,0.0:0.0,1.39744e-05,0.999987	0/0:26:0.998985:3,3:3-3,3-3:13,9,0,4:3,13:2,4:161.383:326.675,113.385:0.0,0.0:1.3e-43,0.000375542,0.999628
+chr1	8504809	.	TTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=8504823;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:0.999994:7,7:4-7,4-7:19,26,0,6:7,19:3,2|4,1|5,2|6,1:356.642:366.612,131.36:0.896026,0.896026:0.0,1.83484e-06,1.0	0/0:37:1.00001:5,5:5-5,5-5:23,8,0,6:5,23:3,1|4,5:210.727:326.675,113.385:0.0,0.0:0.0,2.7635e-07,1.0
+chr1	8528507	.	TTGTTGTTGTTG	.	.	.	END=8528518;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:22,13,0,0:4,22:NULL:203.703:366.612,131.36:0.0,0.0:0.0,9.52647e-07,1.0	0/0:26:0.999939:4,4:4-4,4-4:17,7,0,2:4,17:3,2:151.591:326.675,113.385:0.0,0.0:0.0,3.18312e-05,0.999971
+chr1	8529981	.	AACCAACCAACCAACC	AACCAACCAACC	.	.	END=8529996;RU=aacc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:40:1.0:3,4:3-3,4-4:27,11,0,2:3,10|4,17:2,1|3,1:240.874:366.612,131.36:0.0,0.0:0.0,1.0,4.47201e-20	0/0:24:0.985496:4,4:4-4,4-4:10,14,0,0:4,10:NULL:167.18:326.675,113.385:0.0,0.0:3.47962e-34,0.0120016,0.988025
+chr1	8536034	.	AAAACAAAACAAAAC	.	.	.	END=8536048;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.476:366.612,131.36:0.0,0.0:0.0,1.08851e-05,0.999993	0/0:38:1.00001:3,3:3-3,3-3:23,15,0,0:3,23:NULL:233.041:326.675,113.385:0.0,0.0:0.0,2.21728e-06,1.0
+chr1	8536113	.	CAACAACAACAACAACAACAACAACAA	CAACAACAACAACAACAA	.	.	END=8536139;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.495472:6,6:3-9,3-9:4,14,0,0:6,4:NULL:145.49:366.612,131.36:1.9144,1.9144:0.918823,0.0812714,3.42406e-12	0/0:34:0.999281:9,9:9-9,9-9:14,16,0,4:9,14:4,1|5,1|8,2:234.098:326.675,113.385:0.0,0.0:2.68761e-26,0.000352468,0.999651
+chr1	8536661	.	ACAACAACAACA	.	.	.	END=8536672;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:168.447:366.612,131.36:0.0,0.0:0.0,3.16091e-06,1.0	0/0:27:0.999897:4,4:4-4,4-4:16,8,0,3:4,16:3,3:158.328:326.675,113.385:0.0,0.0:0.0,3.98677e-05,0.999963
+chr1	8536682	.	CAAACAAACAAA	.	.	.	END=8536693;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999998:3,3:3-3,3-3:19,10,0,2:3,19:2,2:179.592:366.612,131.36:0.0,0.0:0.0,1.04607e-05,0.999993	0/0:24:0.999723:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.967:326.675,113.385:0.0,0.0:0.0,0.000151341,0.99985
+chr1	8537537	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=8537556;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.99989:4,4:3-4,3-4:16,7,0,4:4,16:2,1|3,3:155.271:366.612,131.36:0.40582,0.40582:0.0,4.45846e-05,0.999956	0/0:20:0.991856:4,4:4-4,4-4:10,8,0,2:4,10:3,2:128.224:326.675,113.385:0.0,0.0:6.05885e-31,0.00459612,0.995416
+chr1	8543734	.	AAATAAATAAAT	.	.	.	END=8543745;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:200.084:366.612,131.36:0.0,0.0:0.0,8.25062e-08,1.0	0/0:16:0.997637:3,3:3-3,3-3:12,4,0,0:3,12:NULL:81.7413:326.675,113.385:0.0,0.0:2.84343e-35,0.00106447,0.998938
+chr1	8554881	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=8554988;RU=agaggc;PERIOD=6;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:31:0.298195:6,21:5-13,13-21:2,6,0,21:6,2:2,2|3,2|4,3|5,1|6,1|7,1|8,3|9,1|10,2|12,1|16,2|18,1|19,1:216.764:366.612,131.36:3.12548,1.90866:4.36146e-16,1.0,3.07779e-23	2/0:51:0.994923:13,18:4-13,17-18:5,18,0,25:13,3|17,2:3,2|4,2|5,1|7,5|8,4|9,2|10,1|12,1|13,2|14,1|15,2|16,1|18,1:373.705:326.675,113.385:2.97959,0.547696:1.91093e-05,0.999985,2.24371e-15
+chr1	8557824	.	ACACACACACACAC	ACACACACACAC	.	.	END=8557837;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.994354:6,6:6-7,6-7:12,10,0,0:6,12:NULL:136.46:366.612,131.36:0.412766,0.412766:0.997344,0.00266321,3.95322e-22	0/0:35:1.00001:7,7:7-7,7-7:21,11,0,2:7,21:4,1|6,1:197.338:326.675,113.385:0.139319,0.139319:1.6042e-41,2.70255e-06,1.0
+chr1	8567230	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTA	.	.	END=8567268;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.97243:11,11:11-11,11-11:9,8,0,0:11,9:NULL:111.207:366.612,131.36:0.0,0.0:0.993655,0.00635861,1.57671e-20	0/0:14:0.809962:13,13:13-13,13-13:6,6,0,2:13,6:3,1|9,1:98.1398:326.675,113.385:0.0,0.0:1.63673e-10,0.119958,0.880145
+chr1	8574197	.	CACACACACACA	.	.	.	END=8574208;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:6,6:6-6,6-6:21,17,0,0:6,21:NULL:234.116:366.612,131.36:0.0,0.0:1e-45,4.21085e-06,0.999995	0/0:36:1.0:6,6:6-6,6-6:25,9,0,2:6,25:4,2:198.818:326.675,113.385:0.0,0.0:0.0,2.05172e-07,1.0
+chr1	8575616	.	TGGTGGTGGTGGTGGTGG	.	.	.	END=8575633;RU=tgg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999936:6,6:6-6,6-6:17,16,0,2:6,17:5,2:234.43:366.612,131.36:0.0,0.0:2.7e-44,3.00017e-05,0.999971	0/0:28:0.999978:6,6:6-6,6-6:18,8,0,2:6,18:4,1|5,1:159.315:326.675,113.385:0.0,0.0:0.0,1.73442e-05,0.999986
+chr1	8580889	.	GTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT	.	.	END=8580912;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.989305:10,10:9-10,9-10:17,21,0,4:9,2|10,15:5,2|7,1|9,1:302.27:366.612,131.36:0.298675,0.298675:0.999971,3.22529e-05,3.67174e-31	0/0:40:0.999625:12,12:12-13,12-13:24,10,0,5:12,22|13,2:5,3|11,2:236.795:326.675,113.385:0.284901,0.284901:6.62828e-34,5.70766e-07,1.0
+chr1	8584648	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8584699;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0306459:11,11:11-14,11-14:0,8,0,0:NULL:NULL:72.4529:366.612,131.36:0.952864,0.952864:1.0,0.0,0.0	0/0:9:0.24064:26,26:23-26,23-26:2,2,0,5:26,2:5,1|8,1|9,1|14,1|18,1:66.5773:326.675,113.385:0.772658,0.772658:0.000298698,0.390389,0.609378
+chr1	8584700	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATAT,ATATATATATATATATATATATATATATATATATATAT	.	.	END=8584747;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:10:0.0316378:19,19:17-20,17-20:0,9,0,0:NULL:NULL:82.3892:366.612,131.36:1.15795,1.15795:1.0,0.0,0.0	1/1:1:0.000252147:6,6:6-6,6-6:0,1,0,0:NULL:NULL:8.42831:326.675,113.385:0.0,0.0:0.107513,0.489833,0.402853
+chr1	8585797	.	TATTTATTTATTTATT	.	.	.	END=8585812;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.991404:4,4:4-4,4-4:11,15,0,0:4,11:NULL:180.622:366.612,131.36:0.0,0.0:6.17043e-36,0.00623376,0.993782	0/0:24:0.998301:4,4:4-4,4-4:13,11,0,0:4,13:NULL:151.104:326.675,113.385:0.0,0.0:9.11e-43,0.00118285,0.998823
+chr1	8586014	.	TTTATTTATTTA	.	.	.	END=8586025;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.996092:3,3:3-3,3-3:12,11,0,0:3,12:NULL:150.001:366.612,131.36:0.0,0.0:5.02997e-39,0.00182207,0.998185	0/0:22:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.173:326.675,113.385:0.0,0.0:0.0,7.8491e-05,0.999925
+chr1	8594736	.	TGTGTGTGTGTGTG	.	.	.	END=8594749;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.99945:7,7:7-7,7-7:14,18,0,2:7,14:6,2:240.607:366.612,131.36:0.0,0.0:1.37954e-27,0.000272071,0.999728	0/0:29:0.99987:7,7:7-7,7-7:16,8,0,5:7,16:4,1|5,2|6,2:178.756:326.675,113.385:0.0,0.0:7.19342e-32,4.09985e-05,0.999963
+chr1	8596349	.	TGTGTGTGTGTG	.	.	.	END=8596360;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.986206:6,6:6-6,6-6:10,8,0,0:6,10:NULL:106.886:366.612,131.36:0.0,0.0:6.00194e-24,0.00732323,0.992693	0/0:20:0.986306:6,6:6-6,6-6:10,10,0,0:6,10:NULL:133.658:326.675,113.385:0.0,0.0:4.46305e-24,0.00791973,0.9921
+chr1	8597826	.	CACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=8597851;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.818865:15,15:15-15,15-15:6,3,0,0:15,6:NULL:51.6084:366.612,131.36:0.0,0.0:7.6657e-20,0.0258792,0.97417	0/0:11:0.40379:13,13:13-14,13-14:3,3,0,4:13,3:5,1|11,1|12,2:69.6071:326.675,113.385:0.518267,0.518267:6.64642e-05,0.161811,0.838196
+chr1	8614957	.	AAACAAACAAACAAACAAAC	.	.	.	END=8614976;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:27,13,0,3:5,27:3,3:252.777:366.612,131.36:0.0,0.0:0.0,9.01005e-08,1.0	0/0:23:0.995445:5,5:5-5,5-5:11,10,0,2:5,11:4,2:149.524:326.675,113.385:0.0,0.0:6.34409e-38,0.00224629,0.997761
+chr1	8619173	.	GTTGTTGTTGTTGTT	GTTGTTGTTGTT,GTTGTTGTTGTTGTTGTT	.	.	END=8619187;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0910916:4,6:4-7,4-7:0,15,0,4:NULL:3,1|4,3:169.146:366.612,131.36:1.17826,1.11561:0.0425979,0.336559,0.620952	0/0:20:0.997823:5,5:5-5,5-5:12,6,0,2:5,12:4,2:118.793:326.675,113.385:0.0,0.0:3.09658e-36,0.000974604,0.999028
+chr1	8628070	.	TTTGTTTGTTTG	TTTG	.	.	END=8628081;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0968113:1,1:1-2,1-2:0,20,0,0:NULL:NULL:185.299:366.612,131.36:0.506017,0.506017:0.302128,0.512574,0.185307	0/0:18:0.996572:3,3:3-3,3-3:11,5,0,2:3,11:2,2:106.536:326.675,113.385:0.0,0.0:2.83415e-36,0.00109878,0.998906
+chr1	8628100	.	TTGTTTTGTTTTGTT	.	.	.	END=8628114;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999919:3,3:3-3,3-3:17,23,0,0:3,17:NULL:278.982:366.612,131.36:0.0,0.0:0.0,7.79595e-05,0.999925	0/0:21:0.999719:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.395:326.675,113.385:0.0,0.0:0.0,0.000150872,0.99985
+chr1	8628129	.	TTTATTTTTATTTTTATT	.	.	.	END=8628146;RU=tttatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999891:3,3:3-3,3-3:16,18,0,2:3,16:2,2:247.617:366.612,131.36:0.0,0.0:0.0,7.63338e-05,0.999925	0/0:19:0.999864:3,3:3-3,3-3:16,3,0,0:3,16:NULL:95.0823:326.675,113.385:0.0,0.0:0.0,7.19751e-05,0.999932
+chr1	8631314	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC	.	.	END=8631341;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.988226:14,14:13-14,13-14:18,5,0,2:13,3|14,15:7,1|11,1:144.884:326.675,113.385:0.236383,0.236383:1.25388e-15,0.0117186,0.988308
+chr1	8631352	.	TGTGTGTGTGTGTGTGTGTGTG	TG	.	.	END=8631373;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:22:0.679657:11,11:10-12,10-12:14,5,0,3:10,2|11,10|12,2:5,1|10,2:139.777:326.675,113.385:0.653165,0.653165:1.8551e-16,0.0629716,0.937121
+chr1	8631769	.	TTTTGTTTTGTTTTG	TTTTG	.	.	END=8631783;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:23:0.998185:3,3:3-3,3-3:12,9,0,2:3,12:2,2:143.831:326.675,113.385:0.0,0.0:2.94001e-37,0.000914917,0.999089
+chr1	8631787	.	GTTTGTTTGTTT	GTTT	.	.	END=8631798;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:172.164:326.675,113.385:0.0,0.0:0.0,1.10055e-05,0.999993
+chr1	8632668	.	CCCACCCACCCA	CCCACCCACCCACCCACCCA	.	.	END=8632679;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.996957:5,5:5-5,5-5:12,0,0,0:5,12:NULL:48.0199:366.612,131.36:0.0,0.0:1.27465e-30,0.000505948,0.999499	0/1:36:1.0:3,5:3-3,5-5:31,5,0,0:3,18|5,13:NULL:191.55:326.675,113.385:0.0,0.0:0.0,1.0066e-26,1.0
+chr1	8633725	.	ATAAATAAATAA	ATAA	.	.	END=8633736;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:24:0.999912:3,3:3-3,3-3:17,7,0,0:3,17:NULL:135.44:326.675,113.385:0.0,0.0:0.0,5.65693e-05,0.999947
+chr1	8633735	.	AACAACAACAAC	AAC	.	.	END=8633746;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.999715:4,4:4-4,4-4:16,10,0,0:4,16:NULL:157.321:326.675,113.385:0.0,0.0:1e-45,0.000207364,0.999796
+chr1	8635079	.	ACCCACCCACCC	.	.	.	END=8635090;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.436831:3,3:3-3,3-3:3,1,0,0:3,3:NULL:19.9896:366.612,131.36:0.0990099,0.0990099:1.20682e-08,0.229503,0.77053	0/0:11:0.808579:3,3:3-3,3-3:5,6,0,0:3,5:NULL:73.0765:326.675,113.385:0.0,0.0:7.69984e-14,0.0907137,0.909384
+chr1	8641425	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8641448;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997989:12,12:12-12,12-12:12,11,0,5:12,12:5,1|6,2|11,2:194.886:366.612,131.36:0.0,0.0:2.21356e-21,0.000836114,0.999166	0/0:17:0.998552:12,12:12-12,12-12:13,2,0,2:12,13:6,1|11,1:88.402:326.675,113.385:0.0,0.0:6.60585e-23,0.000666587,0.999339
+chr1	8642579	.	AAATAAATAAAT	.	.	.	END=8642590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.00001:3,3:3-4,3-4:19,29,0,4:3,19:2,4:367.151:366.612,131.36:0.253975,0.253975:0.0,6.69503e-06,0.999994	0/0:28:0.999431:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.869:326.675,113.385:0.0,0.0:1.361e-41,0.00026199,0.999742
+chr1	8642988	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8643027;RU=tc;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.321181:15,19:15-15,15-22:8,12,0,4:15,8:7,1|8,1|10,1|19,1:188.563:366.612,131.36:0.0,2.24742:0.321103,0.678909,4.43521e-22	0/0:27:0.41447:20,20:19-20,19-20:8,11,0,8:19,3|20,5:6,1|8,1|11,1|13,1|14,1|16,1|18,1|19,1:206.384:326.675,113.385:0.484441,0.484441:3.2159e-05,0.557393,0.442685
+chr1	8643034	.	TCTATCTATCTA	TCTATCTA	.	.	END=8643045;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.0739848:2,2:1-3,1-3:0,16,0,0:NULL:NULL:151.244:366.612,131.36:0.765136,0.765136:0.269062,0.506557,0.224385	0/0:27:0.999628:3,3:2-3,2-3:15,11,0,0:3,15:NULL:161.037:326.675,113.385:0.323567,0.323567:7.78753e-29,0.000218365,0.999782
+chr1	8643653	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTT	.	.	END=8643682;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0460221:4,4:2-5,2-5:0,17,0,2:NULL:4,2:163.884:366.612,131.36:1.01097,1.01097:0.386743,0.490343,0.123007	0/0:34:0.999927:6,6:6-6,6-6:17,11,0,5:6,17:3,3|4,1|5,1:207.421:326.675,113.385:0.139319,0.139319:1e-45,5.03197e-05,0.999949
+chr1	8643693	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8643718;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:25:0.32159:14,17:12-14,12-18:2,15,0,6:14,2:5,1|6,1|11,1|13,1|14,1|17,1:192.189:366.612,131.36:0.680941,1.99696:6.49809e-26,0.000350704,0.999652	0/2:38:0.456917:13,15:13-13,13-15:19,12,0,6:12,2|13,17:5,1|6,1|8,1|10,1|12,1|15,1:257.188:326.675,113.385:0.0,1.01474:4.28029e-29,3.84308e-06,1.0
+chr1	8646828	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATT	.	.	END=8646863;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.99891:7,7:7-7,7-7:13,18,0,2:7,13:4,1|6,1:234.583:366.612,131.36:0.0,0.0:0.999819,0.000181101,1.7486e-33	0/0:25:0.998611:9,9:4-9,4-9:13,6,0,4:9,13:6,1|7,2|8,1:137.185:326.675,113.385:2.04948,2.04948:8.80789e-28,0.000791479,0.999211
+chr1	8650375	.	ACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=8650398;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.996598:16,16:16-18,16-18:16,11,0,6:15,2|16,14:6,1|7,1|9,1|15,3:222.279:366.612,131.36:0.581383,0.581383:0.0,0.0,1.0	0/0:24:0.984644:12,12:11-12,11-12:17,3,0,4:11,3|12,14:8,1|11,3:137.599:326.675,113.385:0.270063,0.270063:5.28161e-17,0.0152271,0.984803
+chr1	8650639	.	ATATATATATATATATATATATATATATATATATATATAT	AT,ATATATATATATATATATATATATATATATAT	.	.	END=8650678;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00128449:1,1:1-6,1-6:0,4,0,0:NULL:NULL:35.4749:366.612,131.36:1.92492,1.92492:0.248497,0.563877,0.187649	2/2:4:0.0175477:16,16:16-20,16-20:0,2,0,0:NULL:NULL:17.2343:326.675,113.385:0.900283,0.900283:0.271692,0.499525,0.228792
+chr1	8650679	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=8650710;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.299029:19,19:17-19,17-19:3,3,0,0:19,3:NULL:41.0175:366.612,131.36:0.813329,0.813329:7.60869e-10,0.18253,0.817535	0/0:8:0.436188:16,16:16-16,16-16:3,3,0,2:16,3:11,1|15,1:54.5607:326.675,113.385:0.19802,0.19802:1.21553e-05,0.246219,0.753781
+chr1	8651209	.	AATAAATAAATA	AATA	.	.	END=8651220;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0982358:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.293:366.612,131.36:0.975134,0.975134:0.238523,0.50738,0.254128	0/0:32:1.0:3,3:3-3,3-3:24,5,0,3:3,24:2,3:160.953:326.675,113.385:0.0,0.0:0.0,1.48101e-07,1.0
+chr1	8651810	.	AAAACAAAAACAAAAACA	.	.	.	END=8651827;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:211.408:366.612,131.36:0.0,0.0:0.0,1.21047e-07,1.0	0/0:18:0.989372:3,3:3-3,3-3:10,8,0,0:3,10:NULL:112.49:326.675,113.385:0.0,0.0:6.9492e-33,0.0064146,0.993602
+chr1	8653498	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	.	END=8653537;RU=aagaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.503954:8,8:5-8,5-8:4,12,0,0:8,4:NULL:126.321:366.612,131.36:0.761926,0.761926:6.16962e-12,0.372315,0.627739	0/0:30:0.998573:8,8:8-8,8-8:13,12,0,5:8,13:3,1|4,1|5,2|7,1:202.014:326.675,113.385:0.0,0.0:4.65052e-38,0.000786841,0.999218
+chr1	8654962	.	CTCTCTCCTCTCTCCTCTCTC	CTCTCTC	.	.	END=8654982;RU=ctctctc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.250215:1,1:1-1,1-1:0,18,0,0:NULL:NULL:160.895:366.612,131.36:0.0990099,0.0990099:0.520212,0.417376,0.0625452	0/0:25:0.99915:3,3:3-3,3-3:14,11,0,0:3,14:NULL:158.356:326.675,113.385:0.0,0.0:5.11259e-39,0.00063414,0.99937
+chr1	8655539	.	TGTATATACAGTTTGTATATACAGTTTGTATATACAGTT	.	.	.	END=8655577;RU=tgtatatacagtt;PERIOD=13;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.991493:3,3:3-3,3-3:11,14,0,0:3,11:NULL:171.34:366.612,131.36:0.0,0.0:6.08752e-14,0.00739242,0.992625	0/0:38:1.0:3,3:3-3,3-3:27,11,0,0:3,27:NULL:220.313:326.675,113.385:0.0,0.0:7.89224e-34,2.1361e-07,1.0
+chr1	8661278	.	TCTGCGCACTGCCTCTCTGCGCACTGCCTCTCTGCGCACTGCCTC	.	.	.	END=8661322;RU=tctgcgcactgcctc;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.735443:3,3:1-3,1-3:5,4,0,0:3,5:NULL:63.5448:366.612,131.36:0.339533,0.339533:1.33779e-06,0.179636,0.820434	0/0:27:0.999987:3,3:3-3,3-3:20,7,0,0:3,20:NULL:149.294:326.675,113.385:0.0,0.0:1.29928e-24,2.25915e-05,0.999979
+chr1	8662879	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8662932;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.559272:24,24:21-24,21-24:4,17,0,14:24,4:5,1|6,1|7,3|9,1|12,2|14,1|17,1|19,1|21,2|22,1:288.885:366.612,131.36:1.34719,1.34719:0.955649,0.044423,3.39378e-08	0/0:30:0.79467:27,27:26-28,26-28:6,9,0,13:27,6:8,1|11,1|13,1|14,1|15,1|16,2|17,1|18,2|22,1|23,1|27,1:210.896:326.675,113.385:0.464609,0.464609:1.75214e-14,0.0702106,0.929885
+chr1	8670288	.	AAATAAATAAAT	.	.	.	END=8670299;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999475:3,3:3-3,3-3:14,13,0,0:3,14:NULL:169.599:366.612,131.36:0.0,0.0:0.0,0.000333998,0.999667	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.846:326.675,113.385:0.0,0.0:0.0,7.53837e-06,0.999994
+chr1	8675250	.	CACACACACACACACACA	CACACACACACA,CACACACACACACA	.	.	END=8675267;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.929463:6,7:6-6,6-10:23,14,0,2:5,2|6,16|7,3|9,2:4,1|7,1:266.324:366.612,131.36:0.0,1.13866:0.929583,0.0705108,5.71458e-32	0/0:29:0.69922:9,9:5-10,5-10:20,9,0,0:5,2|8,2|9,14|10,2:NULL:190.405:326.675,113.385:1.99244,1.99244:2.03531e-21,0.280196,0.719807
+chr1	8675272	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8675305;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.999897:14,14:14-14,14-14:22,16,0,4:13,2|14,20:6,1|7,1|8,1|13,1:274.611:366.612,131.36:0.0,0.0:1.0,7.88526e-07,0.0	0/0:29:0.907371:17,17:15-18,15-18:12,11,0,4:16,2|17,10:4,1|13,1|15,1|16,1:191.535:326.675,113.385:0.615775,0.615775:1.33605e-10,0.0899302,0.910167
+chr1	8675459	.	ACAGAAACACAGAAACACAGAAAC	.	.	.	END=8675482;RU=acagaaac;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999994:3,3:3-3,3-3:20,19,0,0:3,20:NULL:255.512:366.612,131.36:0.0,0.0:0.0,1.85232e-05,0.999985	0/0:25:0.999268:3,3:3-3,3-3:13,10,0,2:3,13:2,2:159.691:326.675,113.385:0.0,0.0:9.36e-43,0.000455439,0.999546
+chr1	8675986	.	ATTTATTTATTT	.	.	.	END=8675997;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:31,13,0,0:3,31:NULL:243.113:366.612,131.36:0.0,0.0:0.0,2.39922e-09,1.0	0/0:30:0.999964:3,3:3-3,3-3:18,12,0,0:3,18:NULL:186.787:326.675,113.385:0.0,0.0:0.0,2.80001e-05,0.999972
+chr1	8676389	.	AAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC,AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	END=8676418;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.960004:8,9:8-9,9-9:13,10,0,5:8,4|9,9:5,3|6,1|7,1:195.192:366.612,131.36:0.45695,0.0:0.0,4.26259e-06,0.999995	0/0:34:0.999914:6,6:6-6,6-6:17,9,0,8:6,17:3,3|4,2|5,3:213.522:326.675,113.385:0.0,0.0:5.66594e-34,3.7178e-05,0.999964
+chr1	8678460	.	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8678479;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.955016:17,18:13-17,13-18:7,10,0,6:17,5|18,2:6,1|8,2|15,1|16,2:180.984:366.612,131.36:1.33704,1.91348:0.0,0.0,1.0	0/0:14:0.896921:10,10:10-11,10-11:7,4,0,2:10,7:5,1|8,1:79.5285:326.675,113.385:0.475866,0.475866:1.70654e-11,0.0425545,0.957517
+chr1	8678493	.	TACATATATACATATATACATATA	.	.	.	END=8678516;RU=tacatata;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999933:3,3:3-3,3-3:17,10,0,0:3,17:NULL:163.081:366.612,131.36:0.0,0.0:0.0,5.9905e-05,0.999941	0/0:16:0.992139:3,3:3-3,3-3:10,4,0,2:3,10:2,2:88.166:326.675,113.385:0.0,0.0:2.3385e-30,0.00314205,0.996867
+chr1	8679768	.	ATAAAATAAAATAAA	.	.	.	END=8679782;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:3,3:3-3,3-3:20,22,0,2:3,20:2,2:296.659:366.612,131.36:0.0,0.0:0.0,3.54493e-06,1.0	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.886:326.675,113.385:0.0,0.0:0.0,3.57574e-07,1.0
+chr1	8681683	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	END=8681750;RU=aagg;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.280439:12,12:11-12,11-12:2,10,0,6:12,2:6,1|9,1|10,1|11,2|12,1:148.243:366.612,131.36:0.437216,0.437216:1.0,0.0,0.0	0/0:39:0.280034:17,17:13-17,13-17:2,17,0,19:17,2:2,1|4,1|5,2|6,2|7,3|8,1|10,3|12,1|13,3|15,2:298.812:326.675,113.385:1.83337,1.83337:2.37018e-05,0.427834,0.572237
+chr1	8682359	.	CACACACACACACACACACA	CACACACACACACACACACACA	.	.	END=8682378;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:32:0.691927:10,11:10-10,10-11:15,11,0,5:10,12|11,3:5,1|7,2|8,1|9,1:208.492:366.612,131.36:0.0,0.533001:1.26372e-21,5.01982e-05,0.999949	0/0:41:0.999694:10,10:10-11,10-11:15,17,0,8:10,15:6,2|7,1|8,1|9,3|10,1:286.511:326.675,113.385:0.169767,0.169767:4.6019e-29,8.81946e-05,0.999911
+chr1	8682430	.	CTCTCTCTCTCT	CTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8682441;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:1.0:5,5:5-5,5-5:20,10,0,0:5,20:NULL:171.799:366.612,131.36:0.0,0.0:0.999995,4.85419e-06,1.68552e-36	0/2:33:0.451644:6,13:6-6,5-13:14,17,0,2:5,2|6,12:5,1|13,1:252.805:326.675,113.385:0.0,3.78075:7.49433e-20,0.000777866,0.999226
+chr1	8682935	.	CACACACACACACACA	CACACACACACACA	.	.	END=8682950;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.152359:7,7:5-8,5-8:2,23,0,0:7,2:NULL:218.895:366.612,131.36:0.89526,0.89526:0.71237,0.287602,3.5247e-05	0/0:32:0.999976:8,8:8-8,8-8:18,12,0,2:8,18:4,1|6,1:195.974:326.675,113.385:0.0,0.0:1.15451e-31,2.82206e-05,0.999972
+chr1	8703164	.	GGCTCAGGGCTCAGGGCTCAG	.	.	.	END=8703184;RU=ggctcag;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:32,20,0,2:3,32:2,2:327.025:366.612,131.36:0.0,0.0:0.0,8.8737e-10,1.0	0/0:40:1.0:3,3:3-3,3-3:20,17,0,3:3,20:2,3:257.668:326.675,113.385:0.0,0.0:0.0,6.52146e-06,0.999994
+chr1	8704534	.	AACAAACAAACA	.	.	.	END=8704545;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.86:366.612,131.36:0.0,0.0:0.0,2.13067e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:28,8,0,0:3,28:NULL:181.495:326.675,113.385:0.0,0.0:0.0,2.64883e-08,1.0
+chr1	8705430	.	CAAACAAACAAA	.	.	.	END=8705441;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,11,0,2:3,22:2,2:208.072:366.612,131.36:0.0,0.0:0.0,1.44749e-06,1.0	0/0:29:0.999935:3,3:3-3,3-3:17,12,0,0:3,17:NULL:172.513:326.675,113.385:0.0,0.0:0.0,4.61238e-05,0.999956
+chr1	8707303	.	ATGATGATGATG	.	.	.	END=8707314;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:27,16,0,4:4,27:3,4:286.396:366.612,131.36:0.0,0.0:0.0,3.8379e-08,1.0	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:196.225:326.675,113.385:0.0,0.0:0.0,3.46047e-07,1.0
+chr1	8713399	.	AGCAGCAGCAGC	.	.	.	END=8713410;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:4,4:4-4,4-4:41,18,0,0:4,41:NULL:319.55:366.612,131.36:0.0,0.0:0.0,3.76502e-12,1.0	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:222.677:326.675,113.385:0.0,0.0:0.0,2.32344e-07,1.0
+chr1	8714830	.	CATAACATAACATAACATAACATAA	.	.	.	END=8714854;RU=cataa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:5,5:4-5,4-5:22,17,0,4:5,22:2,2|3,2:270.52:366.612,131.36:0.195027,0.195027:0.0,2.05309e-06,1.0	0/0:21:0.942765:5,5:5-5,5-5:7,8,0,6:5,7:2,1|3,3|4,2:140.677:326.675,113.385:0.0,0.0:7.30822e-19,0.0268526,0.973201
+chr1	8723775	.	CACACACACACACA	CACACACACACACACACA	.	.	END=8723788;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:1.0:7,9:7-7,9-9:22,13,0,0:7,11|9,11:NULL:214.794:366.612,131.36:0.0,0.0:0.0,9.26156e-24,1.0	0/0:32:0.976786:7,7:6-7,6-7:20,12,0,0:6,2|7,18:NULL:198.465:326.675,113.385:0.44763,0.44763:9.9095e-36,0.0232696,0.976773
+chr1	8723801	.	GAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGA	.	.	END=8723818;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.989256:11,11:10-12,10-12:21,13,0,2:10,2|11,17|12,2:6,1|9,1:228.637:366.612,131.36:0.42884,0.42884:0.0,2.20501e-06,1.0	0/0:29:0.999479:9,9:9-9,9-9:15,14,0,0:9,15:NULL:187.994:326.675,113.385:0.0,0.0:3.7835e-27,0.000316983,0.999683
+chr1	8724576	.	AAAGAAAGAAAG	.	.	.	END=8724587;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.744:366.612,131.36:0.0,0.0:0.0,2.32757e-06,1.0	0/0:24:0.999755:3,3:3-3,3-3:15,7,0,2:3,15:2,2:134.146:326.675,113.385:0.0,0.0:0.0,9.06099e-05,0.999911
+chr1	8734504	.	ACACACACACAC	.	.	.	END=8734515;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:6,6:5-6,5-6:20,10,0,0:6,20:NULL:172.515:366.612,131.36:0.21692,0.21692:6.7e-44,1.11878e-05,0.999993	0/0:27:0.980354:6,6:5-7,5-7:19,5,0,2:5,2|6,17:4,1|5,1:149.183:326.675,113.385:0.503882,0.503882:8.75392e-34,0.0196928,0.980346
+chr1	8735119	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACA	.	.	END=8735148;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.378135:16,17:15-16,15-18:9,17,0,6:15,3|16,6:7,1|8,2|10,1|13,1|17,1:260.347:366.612,131.36:0.431574,1.08333:1.95696e-19,5.77162e-07,1.0	0/0:20:0.943262:15,15:14-15,14-15:12,4,0,4:14,2|15,10:5,2|10,1|12,1:123.677:326.675,113.385:0.298675,0.298675:5.12276e-12,0.0537033,0.946383
+chr1	8737285	.	AAACAAACAAAC	.	.	.	END=8737296;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:299.192:366.612,131.36:0.0,0.0:0.0,1.45837e-10,1.0	0/0:38:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.572:326.675,113.385:0.0,0.0:0.0,8.58223e-09,1.0
+chr1	8737336	.	ACAAAACAAAACAAAACAAAACAAAACAAA	ACAAAACAAAACAAAACAAA	.	.	END=8737365;RU=acaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.999942:4,4:4-4,4-4:16,23,0,4:4,16:2,2|3,2:303.954:366.612,131.36:0.0,0.0:0.999987,1.18551e-05,0.0	0/0:28:0.993833:6,6:6-6,6-6:10,13,0,5:6,10:3,1|4,1|5,3:191.525:326.675,113.385:0.0,0.0:3.38817e-33,0.00281481,0.997193
+chr1	8737581	.	AAAACAAAACAAAACAAAAC	.	.	.	END=8737600;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:4,4:3-4,3-4:22,16,0,2:4,22:3,2:264.311:366.612,131.36:0.311527,0.311527:0.0,3.04094e-06,1.0	0/0:18:0.995904:4,4:4-4,4-4:11,4,0,3:4,11:3,3:102.332:326.675,113.385:0.0,0.0:8.70255e-37,0.00136317,0.998641
+chr1	8743177	.	TATATATATATATA	TATATATATA	.	.	END=8743190;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.867895:5,5:5-5,5-5:6,13,0,0:5,6:NULL:145.689:366.612,131.36:0.0,0.0:0.977026,0.0230208,1.56871e-16	0/0:14:0.889317:7,7:6-8,6-8:7,5,0,0:7,7:NULL:73.888:326.675,113.385:0.608246,0.608246:3.74191e-10,0.065115,0.934977
+chr1	8743192	.	TTGTTGTTGTTGTTG	TTGTTGTTGTTG	.	.	END=8743206;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.110593:4,4:4-5,4-5:0,13,0,2:NULL:4,2:136.973:366.612,131.36:0.489874,0.489874:0.214803,0.531368,0.253882	0/0:21:0.995999:5,5:5-5,5-5:11,8,0,2:5,11:3,1|4,1:129.239:326.675,113.385:0.0,0.0:1.82559e-33,0.00187478,0.998132
+chr1	8747307	.	CTTTCTTTCTTT	.	.	.	END=8747318;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.997834:3,3:3-3,3-3:12,4,0,0:3,12:NULL:83.5965:366.612,131.36:0.0,0.0:8.14254e-35,0.000934292,0.999067	0/0:19:0.998932:3,3:3-3,3-3:13,6,0,0:3,13:NULL:103.89:326.675,113.385:0.0,0.0:9.97061e-38,0.00050504,0.999499
+chr1	8747937	.	TTTATTTATTTA	.	.	.	END=8747948;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999946:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.806:366.612,131.36:0.0,0.0:0.0,2.47065e-05,0.999978	0/0:13:0.98465:3,3:3-3,3-3:9,4,0,0:3,9:NULL:73.8153:326.675,113.385:0.0,0.0:7.94114e-30,0.00766915,0.992348
+chr1	8748060	.	TTTTGTTTTGTTTTG	TTTTGTTTTG	.	.	END=8748074;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.080817:2,2:1-4,1-4:0,10,0,0:NULL:NULL:90.1502:366.612,131.36:0.699686,0.699686:0.285972,0.507413,0.206621	0/0:15:0.990939:3,3:3-3,3-3:10,5,0,0:3,10:NULL:87.1438:326.675,113.385:0.0,0.0:2.88402e-32,0.00531553,0.9947
+chr1	8750524	.	TCTCTCTCTCTC	TCTCTCTC	.	.	END=8750535;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:28:1.0:4,6:4-6,6-6:18,10,0,0:4,5|6,13:NULL:181.687:366.612,131.36:0.647134,0.0:4.78554e-25,1.0,1.79426e-07	0/0:19:0.997357:6,6:6-6,6-6:12,5,0,2:6,12:4,2:114.706:326.675,113.385:0.0,0.0:1.90457e-24,0.00151952,0.998488
+chr1	8750590	.	TCTCTCTCTC	.	.	.	END=8750599;RU=tc;PERIOD=2;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.958213:5,5:5-5,5-5:8,12,0,0:5,8:NULL:147.136:366.612,131.36:0.0990099,0.0990099:7.00962e-20,0.0238383,0.976206	0/0:17:0.989181:5,5:5-13,5-13:11,5,0,0:5,11:NULL:93.3733:326.675,113.385:3.99824,3.99824:3.62781e-27,0.00379959,0.99621
+chr1	8753159	.	AGAGAGAGAGAG	.	.	.	END=8753170;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999384:6,6:6-6,6-6:14,15,0,0:6,14:NULL:194.554:366.612,131.36:0.0,0.0:2.70498e-32,0.000309613,0.999691	0/0:34:0.999963:6,6:6-6,6-6:17,14,0,3:6,17:4,1|5,2:225.969:326.675,113.385:0.0,0.0:4.18258e-39,1.76549e-05,0.999986
+chr1	8754911	.	TTTGTTTGTTTG	.	.	.	END=8754922;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.992501:3,3:3-3,3-3:10,5,0,0:3,10:NULL:85.1877:366.612,131.36:0.0,0.0:1.03384e-34,0.00308253,0.996927	0/0:22:0.997164:3,3:3-4,3-4:12,9,0,0:3,12:NULL:132.107:326.675,113.385:0.475866,0.475866:1.13921e-40,0.00179077,0.998216
+chr1	8758313	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=8758332;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.994917:5,5:5-5,5-5:11,12,0,4:5,11:3,3|4,1:184.025:366.612,131.36:0.0,0.0:5.55056e-32,0.00249623,0.997511	0/0:27:0.999632:5,5:5-5,5-5:14,10,0,3:5,14:3,2|4,1:170.794:326.675,113.385:0.0,0.0:7.5234e-41,0.000212208,0.999789
+chr1	8759459	.	TATTTATTTATT	.	.	.	END=8759470;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.917:366.612,131.36:0.0,0.0:0.0,8.85738e-06,0.999994	0/0:23:0.999922:3,3:3-3,3-3:17,6,0,0:3,17:NULL:121.223:326.675,113.385:0.0,0.0:0.0,4.54659e-05,0.999956
+chr1	8765668	.	AATAAATAAATA	.	.	.	END=8765679;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.985827:3,3:3-3,3-3:9,16,0,0:3,9:NULL:194.591:366.612,131.36:0.0,0.0:7.47013e-30,0.0105569,0.989469	0/0:13:0.959532:3,3:3-3,3-3:8,5,0,0:3,8:NULL:77.3003:326.675,113.385:0.0,0.0:1.84624e-26,0.0212171,0.978826
+chr1	8771953	.	AGGAAAGGAAAGGAA	.	.	.	END=8771967;RU=aggaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999873:3,3:3-3,3-3:16,8,0,0:3,16:NULL:132.728:366.612,131.36:0.0,0.0:0.0,7.98286e-05,0.999924	0/0:26:0.999792:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.516:326.675,113.385:0.0,0.0:0.0,0.000158064,0.999843
+chr1	8778970	.	TTTCTTTCTTTC	.	.	.	END=8778981;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999944:3,3:3-3,3-3:17,14,0,2:3,17:2,2:215.313:366.612,131.36:0.0,0.0:0.0,2.12768e-05,0.999979	0/0:31:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:175.96:326.675,113.385:0.0,0.0:0.0,6.06985e-06,0.999994
+chr1	8783282	.	ATATATATATATAT	ATATATATATATATATAT	.	.	END=8783295;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.997796:9,9:8-9,8-9:13,13,0,0:9,13:NULL:170.275:366.612,131.36:0.222277,0.222277:1.11918e-35,0.00061759,0.999385	0/0:13:0.49888:7,7:6-7,6-7:10,3,0,0:6,2|7,8:NULL:75.1751:326.675,113.385:0.486863,0.486863:9.80189e-09,0.497037,0.502977
+chr1	8784610	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8784647;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.644557:11,11:10-12,10-12:14,13,0,0:10,2|11,10|12,2:NULL:188.579:366.612,131.36:0.536667,0.536667:1.0,0.0,0.0	0/0:24:0.971893:19,19:17-19,17-19:9,6,0,7:19,9:7,1|11,2|13,1|17,2|18,1:148.768:326.675,113.385:0.634591,0.634591:7.52986e-13,0.0110308,0.988993
+chr1	8784672	.	AAAACAAAACAAAAC	.	.	.	END=8784686;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999716:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.975:366.612,131.36:0.0,0.0:0.0,0.000161651,0.999841	0/0:22:0.998793:3,3:3-3,3-3:13,9,0,0:3,13:NULL:133.991:326.675,113.385:0.0,0.0:1e-44,0.000765121,0.99924
+chr1	8785066	.	TAAATAAATAAA	.	.	.	END=8785077;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999868:3,3:3-3,3-3:16,13,0,2:3,16:2,2:195.894:366.612,131.36:0.0,0.0:0.0,6.85765e-05,0.999933	0/0:22:0.999799:3,3:3-3,3-3:16,6,0,0:3,16:NULL:123.274:326.675,113.385:0.0,0.0:0.0,0.000122937,0.999879
+chr1	8786909	.	CTCTTGCTCTTGCTCTTGCTCTTG	.	.	.	END=8786932;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998181:4,4:4-4,4-4:12,14,0,2:4,12:3,2:192.038:366.612,131.36:0.0,0.0:4.48662e-35,0.0012672,0.998739	0/0:32:0.998131:4,4:4-4,4-4:12,17,0,3:4,12:3,3:221.197:326.675,113.385:0.0,0.0:8.55373e-35,0.00145832,0.998549
+chr1	8790230	.	CTCTTGCTCTTGCTCTTGCTCTTG	CTCTTGCTCTTGCTCTTGCTCTTGCTCTTG	.	.	END=8790253;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999955:5,5:4-5,4-5:18,17,0,5:5,18:2,1|3,1|4,3:261.763:366.612,131.36:0.169767,0.169767:0.0,1.11323e-05,0.999993	0/0:22:0.985433:4,4:4-4,4-4:9,11,0,2:4,9:3,2:153.147:326.675,113.385:0.0,0.0:4.64383e-30,0.00909807,0.990925
+chr1	8794964	.	ATATATATATATATATATATATAT	ATATATATATATAT,ATATATATATATATATATATAT	.	.	END=8794987;RU=at;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:1.00001:7,7:7-7,7-7:22,5,0,0:7,22:NULL:135.279:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/0:11:0.932931:11,12:11-12,11-12:6,5,0,0:11,2|12,4:NULL:74.3812:326.675,113.385:0.484441,0.21692:0.00011127,0.943244,0.0567284
+chr1	8796394	.	ATTTATTTATTT	ATTT	.	.	END=8796405;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0726585:1,1:1-1,1-1:0,14,0,0:NULL:NULL:121.378:366.612,131.36:0.0,0.0:0.142909,0.492976,0.364275	0/0:20:0.998744:3,3:3-3,3-3:13,7,0,0:3,13:NULL:116.182:326.675,113.385:0.0,0.0:1.53173e-38,0.000632784,0.99937
+chr1	8798684	.	AGCAGCAGCAGC	AGC	.	.	END=8798695;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.0214006:1,1:1-4,1-4:0,1,0,0:NULL:NULL:8.21738:366.612,131.36:1.29472,1.29472:0.184075,0.489982,0.326062	0/0:37:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:226.317:326.675,113.385:0.0,0.0:0.0,5.43975e-06,0.999995
+chr1	8800250	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGA	.	.	END=8800297;RU=agga;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.139509:1,1:1-1,1-1:0,19,0,0:NULL:NULL:173.395:366.612,131.36:0.0,0.0:0.936995,0.0627439,0.000350964	0/0:22:0.594842:12,12:12-12,12-12:4,8,0,10:12,4:2,1|4,2|6,1|7,2|8,1|9,2|11,1:162.595:326.675,113.385:0.0990099,0.0990099:1.58453e-08,0.225544,0.774489
+chr1	8800676	.	TAAATAAATAAA	.	.	.	END=8800687;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999959:3,3:3-3,3-3:18,10,0,0:3,18:NULL:167.07:366.612,131.36:0.0,0.0:0.0,2.59607e-05,0.999978	0/0:20:0.99217:3,3:3-3,3-3:10,8,0,2:3,10:2,2:128.633:326.675,113.385:0.0,0.0:5.11394e-33,0.00312934,0.996881
+chr1	8800714	.	AACAACAACAAC	.	.	.	END=8800725;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.987725:4,4:4-4,4-4:11,14,0,0:4,11:NULL:174.339:366.612,131.36:0.0,0.0:2.62346e-30,0.00853959,0.991479	0/0:21:0.992712:4,4:4-4,4-4:11,10,0,0:4,11:NULL:135.379:326.675,113.385:0.0,0.0:6.64144e-31,0.00496701,0.995047
+chr1	8805447	.	GGGGGAGGGGGAGGGGGA	GGGGGA	.	.	END=8805464;RU=ggggga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.109134:1,1:1-2,1-2:0,16,0,0:NULL:NULL:147.015:366.612,131.36:0.38244,0.38244:0.332073,0.509501,0.15845	0/0:20:0.990143:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.811:326.675,113.385:0.0,0.0:1.04539e-30,0.00676799,0.993249
+chr1	8807437	.	TTTGTTTGTTTG	.	.	.	END=8807448;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:182.822:366.612,131.36:0.0,0.0:0.0,8.47762e-06,0.999994	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:195.556:326.675,113.385:0.0,0.0:0.0,1.13934e-06,1.0
+chr1	8810096	.	TAAATAAATAAA	.	.	.	END=8810107;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.990155:3,3:3-3,3-3:10,7,0,0:3,10:NULL:106.147:366.612,131.36:0.0,0.0:1.39982e-33,0.00538124,0.994632	0/0:25:0.999928:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.067:326.675,113.385:0.0,0.0:0.0,3.91424e-05,0.999963
+chr1	8810477	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=8810494;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:21,20,0,0:3,21:NULL:267.378:366.612,131.36:0.0,0.0:0.0,2.79993e-06,1.0	0/0:30:0.999814:3,3:3-3,3-3:15,12,0,3:3,15:2,3:192.709:326.675,113.385:0.0,0.0:0.0,9.18495e-05,0.99991
+chr1	8814191	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8814208;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999651:9,9:8-9,8-9:21,14,0,5:8,2|9,19:4,1|6,1|7,2|8,1:257.454:366.612,131.36:0.169767,0.169767:1.22881e-31,0.000361579,0.999643	0/0:26:0.966826:9,9:8-10,8-10:17,3,0,5:8,3|9,14:4,1|7,1|8,2|9,1:142.198:326.675,113.385:0.461008,0.461008:3.05001e-29,0.0331402,0.966922
+chr1	8815663	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8815726;RU=tc;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:19:0.0165681:30,46:16-31,16-49:0,10,0,7:NULL:13,2|15,1|18,1|30,2|46,1:150.577:366.612,131.36:7.66383,14.7344:8.05921e-08,0.577402,0.422683	1/1:17:0.0181341:28,28:28-32,28-32:0,8,0,7:NULL:4,1|8,1|9,1|11,1|21,1|22,1|26,1:128.18:326.675,113.385:1.25387,1.25387:0.387564,0.473392,0.139121
+chr1	8816641	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=8816672;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.96131:13,13:13-13,13-13:9,14,0,0:13,9:NULL:162.474:366.612,131.36:0.139319,0.139319:0.997654,0.00235383,2.07518e-22	0/0:23:0.80832:16,16:15-16,15-16:10,9,0,4:15,2|16,8:8,1|12,1|15,2:161.939:326.675,113.385:0.390807,0.390807:1.74484e-09,0.183516,0.816552
+chr1	8817844	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8817913;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.150498:11,11:11-18,11-18:23,11,0,5:11,23:6,1|7,2|10,1|16,1:257.355:366.612,131.36:2.58994,2.58994:1.0,0.0,0.0	2/2:19:0.011417:34,34:9-34,9-34:0,11,0,8:NULL:9,2|11,1|18,1|21,1|23,1|29,1|33,1:161.9:326.675,113.385:9.00396,9.00396:0.497947,0.47067,0.0314397
+chr1	8819083	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8819132;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:44:0.78078:27,28:26-27,26-28:7,28,0,9:26,3|27,4:5,2|11,1|12,1|18,1|20,1|23,1|26,1|28,1:373.218:366.612,131.36:0.398507,0.7392:2.9394e-26,7.47407e-05,0.999926	1/1:26:0.153341:26,26:24-26,24-26:2,12,0,10:26,2:5,2|6,2|8,1|10,1|16,1|17,1|19,1|23,1:201.787:326.675,113.385:0.915079,0.915079:0.000331256,0.3795,0.620228
+chr1	8820361	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8820396;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:29:0.301035:25,29:25-25,25-29:5,14,0,10:25,5:4,1|6,1|8,1|12,1|13,2|17,1|18,1|23,1|27,1:236.256:366.612,131.36:0.0,1.69778:0.0,0.0,1.0	0/1:29:0.294315:18,23:18-19,16-23:9,9,0,9:18,7|19,2:5,2|6,1|8,1|9,2|13,1|14,1|23,1:201.422:326.675,113.385:0.236383,2.38098:3.51614e-15,2.22824e-07,1.0
+chr1	8823929	.	TGGGTGGGTGGG	.	.	.	END=8823940;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:30,22,0,4:3,30:2,4:347.42:366.612,131.36:0.0,0.0:0.0,4.20299e-09,1.0	0/0:30:0.99987:3,3:3-3,3-3:15,12,0,3:3,15:2,3:186.501:326.675,113.385:0.0,0.0:0.0,6.40528e-05,0.99994
+chr1	8824054	.	ATTTATTTATTT	.	.	.	END=8824065;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:259.214:366.612,131.36:0.0,0.0:0.0,2.92656e-07,1.0	0/0:40:1.0:3,3:3-3,3-3:30,8,0,2:3,30:2,2:203.191:326.675,113.385:0.0,0.0:0.0,2.58817e-09,1.0
+chr1	8827247	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=8827291;RU=ttg;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.00001:10,10:8-10,8-10:21,24,0,10:10,21:4,2|5,1|7,2|8,1|9,4:383.611:366.612,131.36:0.339533,0.339533:1.0,0.0,0.0	0/0:47:0.999999:15,15:15-15,15-15:19,13,0,15:15,19:3,2|4,1|5,1|6,1|7,2|9,1|10,1|11,1|12,1|13,1|14,3:312.501:326.675,113.385:0.0,0.0:1.25107e-38,7.04996e-06,0.999994
+chr1	8833833	.	ACCACCACCACCACCACC	.	.	.	END=8833850;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:1.0:6,6:6-6,6-6:34,33,0,7:6,34:3,1|4,3|5,3:485.676:366.612,131.36:0.0,0.0:0.0,1.99673e-10,1.0	0/0:47:1.0:6,6:6-6,6-6:28,11,0,8:6,28:3,1|4,3|5,4:273.788:326.675,113.385:0.0,0.0:0.0,1.24028e-08,1.0
+chr1	8834106	.	AAAGAAAGAAAG	.	.	.	END=8834117;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:28,25,0,0:3,28:NULL:342.64:366.612,131.36:0.0,0.0:0.0,1.26556e-07,1.0	0/0:34:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:202.146:326.675,113.385:0.0,0.0:0.0,3.19142e-06,1.0
+chr1	8835404	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8835449;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:51:0.360317:19,23:19-19,18-23:15,26,0,9:18,3|19,12:4,1|5,1|7,1|8,1|9,1|12,1|13,1|17,1|23,1:389.399:366.612,131.36:0.0,2.07647:0.000589075,0.999415,9.12762e-34	2/0:42:0.679654:22,23:22-23,23-23:17,12,0,13:22,7|23,10:5,2|6,1|7,2|8,1|9,1|17,2|20,1|21,1|22,2:298.777:326.675,113.385:0.495841,0.0:9.49549e-09,0.679662,0.320347
+chr1	8837723	.	AATAAATAAATAAATA	AATA	.	.	END=8837738;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.31628:1,1:1-2,1-2:0,28,0,0:NULL:NULL:273.351:366.612,131.36:0.195027,0.195027:0.705939,0.277012,0.0170776	0/0:21:0.999735:4,4:4-4,4-4:15,4,0,2:4,15:2,1|3,1:108.529:326.675,113.385:0.0,0.0:1e-45,0.000120001,0.99988
+chr1	8840838	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=8840876;RU=ctt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:27:0.974815:12,13:12-13,13-13:13,8,0,6:12,3|13,10:4,2|7,1|9,1|10,1|11,1:181.955:366.612,131.36:0.489073,0.0:6.14641e-24,0.974835,0.0252135	0/0:37:0.997373:13,13:13-13,13-13:12,17,0,8:13,12:4,1|6,1|8,1|9,3|10,1|11,1:258.066:326.675,113.385:0.0,0.0:6.14404e-33,0.00142455,0.99858
+chr1	8848162	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8848191;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.0236259:14,14:14-17,14-17:0,1,0,0:NULL:NULL:9.91206:366.612,131.36:1.32769,1.32769:0.0236151,0.261023,0.715409	0/0:24:0.991418:15,15:13-16,13-16:11,4,0,6:15,11:5,1|6,2|10,1|14,2:136.868:326.675,113.385:0.489474,0.489474:2.55922e-15,0.00317791,0.99683
+chr1	8848195	.	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	GAA,GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA,GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=8848293;RU=gaa;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:2:0.000598994:1,59:1-59,1-59:0,2,0,0:NULL:NULL:18.9572:366.612,131.36:24.6864,23.1134:0.10077,0.561584,0.337791	2/2:23:0.322535:32,32:30-34,30-34:2,9,0,12:32,2:4,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|28,1|30,1|31,1|32,1:189.229:326.675,113.385:0.626507,0.626507:0.539029,0.458295,0.00279247
+chr1	8848386	.	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	.	.	END=8848480;RU=gggaa;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0376241:12,12:7-12,7-12:0,1,0,5:NULL:4,1|5,1|7,1|10,1|11,1:45.0742:366.612,131.36:1.23203,1.23203:1.0,0.0,0.0	0/0:25:0.460313:19,19:18-19,18-19:3,9,0,13:19,3:3,1|5,1|8,1|10,1|11,1|13,1|15,1|17,1|18,5:193.919:326.675,113.385:0.284901,0.284901:1.42522e-06,0.210658,0.789391
+chr1	8850301	.	CATACATACATA	.	.	.	END=8850312;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.048:366.612,131.36:0.0,0.0:0.0,1.75028e-07,1.0	0/0:25:1.00001:3,3:3-3,3-3:20,3,0,2:3,20:2,2:124.456:326.675,113.385:0.0,0.0:0.0,3.10488e-06,1.0
+chr1	8851721	.	AGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAA	.	.	END=8851744;RU=agaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:35:1.0:4,6:4-6,6-6:12,23,0,0:4,4|6,8:NULL:259.097:366.612,131.36:0.339533,0.0:1.20748e-15,1.0,2.89637e-09	0/0:40:0.995531:6,6:5-6,5-6:11,23,0,5:6,11:2,1|4,1|5,3:285.933:326.675,113.385:0.425627,0.425627:3.18763e-21,0.00288447,0.997124
+chr1	8852685	.	GGGTGGGTGGGT	.	.	.	END=8852696;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.350289:3,3:1-3,1-3:2,25,0,0:3,2:NULL:230.69:366.612,131.36:0.687673,0.687673:8.77469e-07,0.40522,0.594852	0/0:28:0.928769:3,3:3-3,3-3:7,21,0,0:3,7:NULL:222.275:326.675,113.385:0.19802,0.19802:3.35873e-21,0.043614,0.956457
+chr1	8856513	.	TATATATATATA	TATATATATA	.	.	END=8856524;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:0.971816:5,6:4-6,6-6:18,18,0,0:4,3|5,5|6,10:NULL:253.14:366.612,131.36:0.613062,0.0:3.13099e-10,0.984218,0.0158172	0/0:17:0.891103:6,6:5-6,5-6:14,3,0,0:5,3|6,11:NULL:92.127:326.675,113.385:0.36513,0.36513:2.12696e-13,0.10786,0.892238
+chr1	8857202	.	GAGAGAGAGAGA	GAGAGAGAGA	.	.	END=8857213;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.00001:5,5:5-5,5-5:23,24,0,2:5,23:4,2:322.378:366.612,131.36:0.0,0.0:1.0,7.08375e-07,0.0	0/0:25:0.999129:6,6:5-6,5-6:13,8,0,3:6,13:5,3:149.8:326.675,113.385:0.419363,0.419363:1.06978e-35,0.000363674,0.999637
+chr1	8860742	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8860779;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.940994:20,20:19-20,19-20:8,23,0,13:20,8:5,2|8,1|10,1|11,1|13,1|14,2|15,1|16,2|17,1|19,1:351.72:366.612,131.36:0.323567,0.323567:2.8294e-23,0.0144076,0.985623	0/1:30:0.996848:19,20:18-19,18-20:11,5,0,14:18,2|19,6|20,3:4,1|5,2|6,2|7,1|9,1|10,2|13,2|14,1|20,2:219.945:326.675,113.385:0.323567,0.363786:2.20948e-23,0.000960826,0.999043
+chr1	8863873	.	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG,CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG,CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	.	.	END=8863991;RU=ctgcctg;PERIOD=7;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:59:0.924128:13,20:10-16,15-23:2,23,1,29:13,2:2,1|5,1|6,2|7,2|8,3|9,6|10,4|11,1|13,4|14,2|15,3:459.505:366.612,131.36:1.67955,2.60763:0.0,1.0,7.78635e-10	2/2:50:0.179105:16,16:14-16,14-16:0,18,0,32:NULL:2,1|3,4|4,1|6,3|7,1|8,5|9,2|10,2|11,4|13,4|14,1|15,2|16,2:378.902:326.675,113.385:0.607763,0.607763:0.385714,0.501196,0.113186
+chr1	8865199	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8865252;RU=tc;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.483501:22,24:22-27,23-27:7,21,0,13:22,3|23,2|24,2:4,1|5,1|6,1|7,2|8,1|9,1|11,2|13,1|14,1|22,1|23,1:336.074:366.612,131.36:1.62732,1.37962:0.997519,0.00248811,6.59812e-10	3/0:39:0.968546:26,27:5-27,5-27:19,8,0,9:25,4|26,6|27,9:5,2|6,1|8,1|12,1|15,1|16,1|22,1|26,1:251.944:326.675,113.385:9.18917,7.11396:2.393e-07,0.974888,0.0251617
+chr1	8865253	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8865286;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.831195:15,17:12-15,12-17:9,17,0,4:12,2|14,2|15,3|17,2:11,1|12,2|13,1:243.725:366.612,131.36:1.06407,1.95794:0.10753,0.892336,0.000235103	0/2:25:0.353293:17,18:17-17,17-18:11,8,0,5:17,11:15,4|18,1:170.877:326.675,113.385:0.0,0.537032:1.58965e-25,3.94925e-08,1.0
+chr1	8865886	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8865933;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.483152:24,24:24-26,24-26:4,13,0,9:24,4:7,1|9,2|14,1|15,1|16,1|20,1|24,2:211.934:366.612,131.36:0.744223,0.744223:1.16041e-19,0.0937735,0.906328	0/0:39:0.590958:24,24:24-25,24-25:16,11,0,12:24,13|25,3:5,1|7,2|12,1|13,3|15,1|17,1|19,1|21,1|23,1:275.553:326.675,113.385:0.481803,0.481803:4.06428e-17,0.000140235,0.999864
+chr1	8866609	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8866646;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.944924:20,20:19-24,19-24:15,14,0,17:19,3|20,12:5,1|6,1|8,1|9,2|10,1|11,2|12,1|14,2|15,1|16,2|17,2|19,1:331.989:366.612,131.36:1.62895,1.62895:8.41321e-30,0.000257595,0.999743	0/1:53:0.898856:19,20:19-19,19-20:19,17,0,16:18,2|19,17:5,2|6,1|9,1|10,1|11,2|12,2|14,2|15,4|20,1:390.696:326.675,113.385:0.0,0.472558:6.33979e-22,2.9656e-07,1.0
+chr1	8868138	.	CAAACCAAACCAAAC	.	.	.	END=8868152;RU=caaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:23,10,0,2:3,23:2,2:199.603:366.612,131.36:0.0,0.0:0.0,5.30068e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:28,22,0,0:3,28:NULL:315.714:326.675,113.385:0.0,0.0:0.0,4.2339e-08,1.0
+chr1	8869124	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8869175;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0181264:22,22:23-26,23-26:0,4,0,0:NULL:NULL:37.1521:366.612,131.36:0.783868,0.783868:0.46442,0.437085,0.0986378	2/2:3:0.029014:23,23:23-26,23-26:0,2,0,0:NULL:NULL:22.634:326.675,113.385:1.2356,1.2356:0.258741,0.506922,0.23435
+chr1	8870489	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8870542;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.492783:22,22:19-22,19-22:4,18,0,12:22,4:5,1|9,3|10,2|12,1|19,1|20,1|21,3:273.202:366.612,131.36:1.40196,1.40196:1.0,0.0,0.0	0/2:27:0.229769:27,39:25-27,26-41:5,8,0,13:26,3|27,2:5,2|6,1|11,1|14,1|18,1|19,2|21,1|22,2|23,1|39,1:209.587:326.675,113.385:1.34486,6.22146:1.87855e-07,0.175017,0.825054
+chr1	8870819	.	TTTTATTTTATTTTA	.	.	.	END=8870833;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:209.892:366.612,131.36:0.0,0.0:0.0,1.69948e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:30,7,0,0:3,30:NULL:183.953:326.675,113.385:0.0,0.0:0.0,4.23064e-09,1.0
+chr1	8881143	.	AAATAAATAAAT	.	.	.	END=8881154;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999663:3,3:3-3,3-3:15,16,0,0:3,15:NULL:202.324:366.612,131.36:0.0,0.0:0.0,0.000200851,0.999803	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.894:326.675,113.385:0.0,0.0:0.0,6.30973e-07,1.0
+chr1	8891081	.	CATGCATGCATG	.	.	.	END=8891092;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.965842:3,3:3-3,3-3:8,7,0,0:3,8:NULL:95.5284:366.612,131.36:0.0,0.0:6.51114e-17,0.0148534,0.985179	0/0:21:0.999769:3,3:3-3,3-3:15,6,0,0:3,15:NULL:121.647:326.675,113.385:0.0,0.0:3.8172e-31,0.000124544,0.999879
+chr1	8894445	.	TTTGTTTGTTTG	.	.	.	END=8894456;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999531:3,3:3-3,3-3:14,9,0,0:3,14:NULL:139.193:366.612,131.36:0.0,0.0:0.0,0.000248745,0.999751	0/0:25:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:123.879:326.675,113.385:0.0,0.0:0.0,3.92141e-06,0.999995
+chr1	8896564	.	TCTTTCTTTCTT	.	.	.	END=8896575;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99997:3,3:3-3,3-3:18,9,0,0:3,18:NULL:151.099:366.612,131.36:0.0,0.0:0.0,2.52087e-05,0.999978	0/0:37:1.0:3,3:3-3,3-3:26,9,0,2:3,26:2,2:200.704:326.675,113.385:0.0,0.0:0.0,3.85101e-08,1.0
+chr1	8896983	.	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTT	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	END=8897012;RU=tttgtt;PERIOD=6;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.993442:4,4:4-4,4-4:11,9,0,2:4,11:2,1|3,1:142.233:366.612,131.36:0.0,0.0:0.997042,0.00296483,4.66393e-27	0/0:43:0.999962:5,5:5-5,5-5:17,20,0,6:5,17:2,3|3,1|4,2:291.268:326.675,113.385:0.0,0.0:1e-45,4.48778e-05,0.999956
+chr1	8902045	.	TCTCCTCTCCTCTCCTCTCC	.	.	.	END=8902064;RU=tctcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:26,18,0,2:4,26:2,1|3,1:285.964:366.612,131.36:0.0,0.0:0.0,1.81415e-07,1.0	0/0:35:1.0:4,4:4-4,4-4:25,6,0,4:4,25:3,4:184.34:326.675,113.385:0.0,0.0:0.0,7.11103e-08,1.0
+chr1	8903368	.	TAAATAAATAAA	.	.	.	END=8903379;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999985:3,3:3-3,3-3:18,13,0,0:3,18:NULL:189.562:366.612,131.36:0.0,0.0:0.0,2.00924e-05,0.99998	0/0:24:0.999722:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.598:326.675,113.385:0.0,0.0:0.0,0.000152183,0.999849
+chr1	8905683	.	TCTCTCTCTCTC	.	.	.	END=8905694;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999972:6,6:6-6,6-6:18,8,0,0:6,18:NULL:146.342:366.612,131.36:0.0,0.0:1.2e-43,1.97853e-05,0.99998	0/0:38:1.00001:6,6:6-6,6-6:22,16,0,0:6,22:NULL:232.951:326.675,113.385:0.0,0.0:0.0,1.45279e-06,1.0
+chr1	8907395	.	CACACACACACA	.	.	.	END=8907406;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:6,6:6-6,6-6:29,28,0,3:6,29:5,3:384.25:366.612,131.36:0.0,0.0:0.0,7.76301e-09,1.0	0/0:23:0.995262:6,6:6-6,6-6:11,12,0,0:6,11:NULL:159.469:326.675,113.385:0.0,0.0:9.17521e-26,0.00274876,0.99726
+chr1	8909209	.	TATACATATACATATACATATACATATACATATACATATACATATACA	TATACATATACATATACATATACATATACA,TATACATATACATATACATATACATATACATATACATATACA	.	.	END=8909256;RU=tataca;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.70847:5,7:5-7,7-7:13,9,0,6:5,2|7,11:4,2|5,1|6,3:187.788:366.612,131.36:0.996022,0.0:0.999782,0.000218416,2.55627e-25	0/0:19:0.868755:8,8:8-11,8-11:7,8,0,3:8,7:3,2|6,1:123.592:326.675,113.385:1.47322,1.47322:1.3311e-16,0.0746377,0.925456
+chr1	8909266	.	AGAGAGAGAGAGAG	.	.	.	END=8909279;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999991:7,7:7-7,7-7:19,5,0,0:7,19:NULL:121.83:366.612,131.36:0.0,0.0:3.2e-44,1.76356e-05,0.999986	0/0:16:0.865302:7,7:7-7,7-7:7,9,0,0:7,7:NULL:109.484:326.675,113.385:0.0,0.0:1.3106e-16,0.077319,0.922778
+chr1	8909506	.	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA,CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	.	.	END=8909589;RU=catcta;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.398597:13,15:13-13,13-16:8,15,0,22:13,8:3,5|4,2|5,2|6,2|7,3|8,1|10,3|12,3|15,1:332.842:366.612,131.36:0.0,1.12637:1.09292e-06,1.0,6.81827e-15	0/0:34:0.83448:14,14:14-14,14-14:5,10,0,19:14,5:3,2|5,3|6,1|7,1|8,2|9,1|11,1|12,3|13,5:241.438:326.675,113.385:0.0990099,0.0990099:2.26933e-10,0.0688562,0.931239
+chr1	8912340	.	ATTTATTTATTT	.	.	.	END=8912351;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.99996:3,3:3-3,3-3:17,21,0,0:3,17:NULL:253.744:366.612,131.36:0.0,0.0:0.0,4.85428e-05,0.999955	0/0:24:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.168:326.675,113.385:0.0,0.0:0.0,3.28267e-06,1.0
+chr1	8917312	.	GTTTGTTTGTTT	.	.	.	END=8917323;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:266.186:366.612,131.36:0.0,0.0:0.0,3.14481e-07,1.0	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.076:326.675,113.385:0.0,0.0:0.0,6.01145e-06,0.999995
+chr1	8917711	.	TTTGTTTGTTTGTTTG	.	.	.	END=8917726;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:4,4:4-4,4-4:22,18,0,0:4,22:NULL:258.297:366.612,131.36:0.0,0.0:0.0,3.57385e-06,1.0	0/0:39:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:240.042:326.675,113.385:0.0,0.0:0.0,7.93477e-07,1.0
+chr1	8926905	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=8926964;RU=tttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.638773:10,10:10-10,10-10:4,6,0,2:10,4:3,2:84.7246:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:22:0.527139:15,15:8-15,8-15:4,7,0,9:15,4:2,1|3,1|4,1|5,1|7,1|11,2|12,1|14,1:152.15:326.675,113.385:3.13625,3.13625:2.44555e-09,0.341895,0.658126
+chr1	8927634	.	CTCTCTCTCTCTCTCT	CTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8927649;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.0520976:4,26:1-15,4-27:0,14,0,2:NULL:15,1|26,1:148.603:366.612,131.36:4.1245,7.9309:4.7329e-14,0.622097,0.377956	0/0:52:0.999995:8,8:8-8,8-8:28,18,0,6:7,2|8,26:4,1|6,2|7,3:336.47:326.675,113.385:0.0,0.0:2.082e-42,6.42184e-06,0.999995
+chr1	8928347	.	AAACAAACAAACAAAC	.	.	.	END=8928362;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.165297:4,4:4-7,4-7:0,20,0,0:NULL:NULL:193.107:366.612,131.36:1.38465,1.38465:0.0,0.0,1.0	0/0:28:0.999279:4,4:4-4,4-4:14,14,0,0:4,14:NULL:181.16:326.675,113.385:0.0,0.0:0.0,0.000534942,0.999469
+chr1	8931732	.	TTTGTTTGTTTGTTTG	.	.	.	END=8931747;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999978:4,4:4-4,4-4:19,16,0,0:4,19:NULL:221.065:366.612,131.36:0.0,0.0:0.0,3.19381e-05,0.999971	0/0:16:0.995511:4,4:4-4,4-4:11,3,0,2:4,11:2,1|3,1:84.3862:326.675,113.385:0.0,0.0:3.83811e-36,0.00198111,0.998026
+chr1	8932575	.	TTTATTTATTTATTTA	.	.	.	END=8932590;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:275.257:366.612,131.36:0.0,0.0:0.0,1.20957e-07,1.0	0/0:28:0.99834:4,4:4-4,4-4:13,15,0,0:4,13:NULL:182.651:326.675,113.385:0.0,0.0:2.88158e-36,0.00128161,0.998724
+chr1	8937294	.	GAGGCAGAGGCAGAGGCA	GAGGCAGAGGCA	.	.	END=8937311;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999806:2,2:2-2,2-2:15,19,0,0:2,15:NULL:228.073:366.612,131.36:0.0,0.0:0.999911,8.97412e-05,0.0	0/0:18:0.999731:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.413:326.675,113.385:0.0,0.0:8.13e-43,0.000145271,0.999857
+chr1	8942569	.	TCTTTCTTTCTTTCTT	.	.	.	END=8942584;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.991117:4,4:4-4,4-4:10,11,0,4:4,10:2,1|3,3:164.949:366.612,131.36:0.0,0.0:9.58098e-29,0.0041009,0.995908	0/0:17:0.99744:4,4:4-4,4-4:12,5,0,0:4,12:NULL:92.7736:326.675,113.385:0.0,0.0:6.66647e-35,0.00157776,0.998428
+chr1	8943948	.	GTTTTTGTTTTTGTTTTT	.	.	.	END=8943965;RU=gttttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:263.669:366.612,131.36:0.0,0.0:0.0,2.36322e-07,1.0	0/0:18:0.998791:3,3:3-3,3-3:13,5,0,0:3,13:NULL:96.9382:326.675,113.385:0.0,0.0:5.3e-44,0.000689368,0.999316
+chr1	8944123	.	GTTGGTTGGTTGGTTGGTTG	GTTGGTTGGTTGGTTG	.	.	END=8944142;RU=gttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.166411:4,4:1-4,1-4:0,20,0,4:NULL:4,4:207.832:366.612,131.36:0.699545,0.699545:0.272568,0.516949,0.210488	0/0:40:1.0:5,5:5-5,5-5:25,8,0,7:5,25:3,2|4,5:221.734:326.675,113.385:0.0,0.0:0.0,7.72888e-08,1.0
+chr1	8945703	.	ACACACACACACACAC	ACACACACACACACACACAC	.	.	END=8945718;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.99884:10,10:9-10,9-10:24,17,0,4:9,3|10,21:6,1|9,2|10,1:305.1:366.612,131.36:0.309,0.309:0.0,8.1627e-08,1.0	0/0:27:0.99982:8,8:8-8,8-8:16,5,0,6:8,16:5,1|6,3|7,2:154.178:326.675,113.385:0.0,0.0:2.7511e-30,5.01359e-05,0.999949
+chr1	8946213	.	ACACACACACACACACACACAC	ACACACACAC,ACACACACACACACAC	.	.	END=8946234;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:59:1.0:5,8:5-5,8-8:35,18,0,4:5,23|8,12:6,2|7,2:359.627:366.612,131.36:0.0,0.0:1.0,1.40569e-24,0.0	0/0:32:0.993926:11,11:10-11,10-11:20,6,0,5:10,2|11,18:4,1|5,1|9,1|10,2:180.137:326.675,113.385:0.398753,0.398753:2.41738e-26,0.00609946,0.993917
+chr1	8949155	.	ATTTATTTATTT	.	.	.	END=8949166;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999956:3,3:3-3,3-3:16,28,0,2:3,16:2,2:345.392:366.612,131.36:0.0,0.0:0.0,4.12694e-05,0.999963	0/0:18:0.999001:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.5095:326.675,113.385:0.0,0.0:2.07056e-40,0.000524939,0.999477
+chr1	8954485	.	AATAAATAAATAAATA	.	.	.	END=8954500;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.339876:4,4:1-4,1-4:4,24,0,0:4,4:NULL:256.281:366.612,131.36:1.28766,1.28766:9.34563e-13,0.589488,0.410587	0/0:21:0.995693:4,4:4-4,4-4:11,8,0,2:4,11:3,2:132.213:326.675,113.385:0.0,0.0:2.8702e-33,0.00223349,0.997775
+chr1	8957579	.	AAACAAACAAAC	.	.	.	END=8957590;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.998328:3,3:3-3,3-3:12,20,0,0:3,12:NULL:230.836:366.612,131.36:0.0,0.0:1.85379e-37,0.00112181,0.998883	0/0:25:0.999946:3,3:3-3,3-3:17,6,0,2:3,17:2,2:133.668:326.675,113.385:0.0,0.0:0.0,2.2052e-05,0.999979
+chr1	8962592	.	TTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=8962619;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:7,7:7-8,7-8:22,2,0,3:7,22:3,1|5,1|6,1:130.768:366.612,131.36:0.298675,0.298675:0.0,8.84921e-07,1.0	0/0:22:0.991848:7,7:7-8,7-8:10,7,0,4:7,10:5,2|6,2:139.12:326.675,113.385:0.452422,0.452422:1.87179e-23,0.0030756,0.996935
+chr1	8966427	.	AATGAATGAATGAATG	.	.	.	END=8966442;RU=aatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:34,15,0,3:4,34:3,3:294.258:366.612,131.36:0.0,0.0:0.0,2.03031e-10,1.0	0/0:28:0.999909:4,4:4-4,4-4:16,8,0,4:4,16:3,4:164.559:326.675,113.385:0.0,0.0:0.0,3.99346e-05,0.999963
+chr1	8967541	.	AAAACAAAACAAAACAAAACAAAAC	AAAAC	.	.	END=8967565;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.030121:1,1:1-2,1-2:0,10,0,0:NULL:NULL:91.174:366.612,131.36:0.553571,0.553571:0.292457,0.527873,0.179681	0/0:18:0.991041:5,5:5-5,5-5:10,6,0,2:5,10:4,2:114.147:326.675,113.385:0.0,0.0:2.27669e-34,0.00402819,0.995983
+chr1	8969212	.	CTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8969235;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.315118:15,15:15-16,15-16:3,2,0,0:15,3:NULL:33.7344:366.612,131.36:0.539944,0.539944:0.0,0.0,1.0	0/0:11:0.660708:12,12:12-13,12-13:5,1,0,4:12,5:6,1|7,1|9,1|10,1:61.3337:326.675,113.385:0.345543,0.345543:4.09213e-05,0.150859,0.849184
+chr1	8969424	.	TATATATATATATATATATATATATATATATATATATATA	TATATATATATATA	.	.	END=8969463;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00330237:7,7:1-7,1-7:0,6,0,0:NULL:NULL:59.7665:366.612,131.36:2.0456,2.0456:0.449076,0.48442,0.066672	0/0:6:0.174936:20,20:18-20,18-20:2,2,0,0:20,2:NULL:27.3013:326.675,113.385:0.744881,0.744881:0.00757335,0.50548,0.487012
+chr1	8969463	.	AGAGAGAGAGAGAGAGAGAGAGAG	AG	.	.	END=8969486;RU=ag;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00373898:1,1:1-8,1-8:0,6,0,0:NULL:NULL:60.4272:366.612,131.36:1.77987,1.77987:0.244967,0.559202,0.195847	0/0:14:0.922272:12,12:12-12,12-12:7,4,0,3:12,7:7,1|10,1|11,1:88.785:326.675,113.385:0.0,0.0:6.57346e-13,0.027556,0.972496
+chr1	8974355	.	CATCATCATCAT	CATCATCATCATCATCAT	.	.	END=8974366;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.000355263:6,6:6-6,6-6:0,1,0,0:NULL:NULL:10.2861:366.612,131.36:0.0,0.0:0.00265944,0.115218,0.882229	0/0:47:1.0:4,4:4-4,4-4:24,23,0,0:4,24:NULL:300.522:326.675,113.385:0.0,0.0:0.0,8.12535e-07,1.0
+chr1	8976339	.	TTATTATTATTA	TTATTATTATTATTA	.	.	END=8976350;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.838289:5,5:5-5,5-5:6,16,0,0:5,6:NULL:172.039:366.612,131.36:0.19802,0.19802:1.00381e-25,0.0844077,0.91569	0/0:35:0.999996:4,4:4-5,4-5:20,14,0,0:4,20:NULL:213.92:326.675,113.385:0.431574,0.431574:0.0,1.74031e-05,0.999986
+chr1	8976507	.	CCCACCCACCCA	.	.	.	END=8976518;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999913:3,3:3-3,3-3:16,12,0,0:3,16:NULL:177.625:366.612,131.36:0.0,0.0:0.0,5.45229e-05,0.999948	0/0:60:1.0:3,3:3-3,3-3:37,21,0,2:3,37:2,2:353.756:326.675,113.385:0.0,0.0:0.0,5.56012e-11,1.0
+chr1	8977413	.	AGGAGGAGGAGG	.	.	.	END=8977424;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:22,14,0,0:4,22:NULL:211.443:366.612,131.36:0.0,0.0:0.0,1.70713e-06,1.0	0/0:38:0.999979:4,4:4-4,4-4:18,18,0,2:4,18:3,2:251.578:326.675,113.385:0.0,0.0:0.0,1.51235e-05,0.999986
+chr1	8978639	.	AAAATTAAAATTAAAATT	AAAATT	.	.	END=8978656;RU=aaaatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:0.999948:3,3:3-3,3-3:17,12,0,0:3,17:NULL:178.649:326.675,113.385:0.0,0.0:0.0,4.79368e-05,0.999955
+chr1	8992158	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=8992189;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999219:8,8:7-8,7-8:13,14,0,11:8,13:2,2|4,3|5,3|7,3:262.314:366.612,131.36:0.311527,0.311527:1.92324e-35,0.000353678,0.999651	0/0:41:0.997771:8,8:8-8,8-8:12,21,0,8:8,12:3,1|4,1|6,4|7,2:299.467:326.675,113.385:0.0,0.0:4.40686e-32,0.00147235,0.998534
+chr1	8996946	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8996997;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.443872:26,26:24-31,24-31:4,15,0,9:26,4:5,2|13,2|17,1|18,1|20,1|23,1|24,1:225.953:366.612,131.36:2.41178,2.41178:8.45751e-06,0.180153,0.819909	1/2:18:0.250404:25,28:25-28,25-28:2,5,0,9:25,2:9,1|15,3|16,1|17,1|19,1|25,1|28,1:129.107:326.675,113.385:0.807523,0.960549:6.73269e-08,0.946104,0.053981
+chr1	8997017	.	TTTCTTTCTTTC	.	.	.	END=8997028;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999753:3,3:3-3,3-3:15,14,0,0:3,15:NULL:183.878:366.612,131.36:0.0,0.0:0.0,0.00015218,0.999849	0/0:18:0.999859:3,3:3-3,3-3:16,2,0,0:3,16:NULL:80.5162:326.675,113.385:0.0,0.0:0.0,6.20326e-05,0.999941
+chr1	9000049	.	ATGATGATGATG	.	.	.	END=9000060;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:35,14,0,3:4,35:3,3:288.249:366.612,131.36:0.0,0.0:0.0,7.66698e-11,1.0	0/0:41:1.0:4,4:4-4,4-4:24,15,0,2:4,24:3,2:250.432:326.675,113.385:0.0,0.0:0.0,4.66483e-07,1.0
+chr1	9000143	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=9000170;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:6,6:6-6,6-6:29,20,0,2:6,29:3,2:318.407:366.612,131.36:0.0,0.0:1.0,5.87949e-09,0.0	0/0:48:1.0:7,7:7-7,7-7:24,13,0,11:7,24:2,2|4,3|5,2|6,4:298.135:326.675,113.385:0.0,0.0:0.0,1.88854e-07,1.0
+chr1	9003159	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9003188;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0294368:12,12:12-18,12-18:0,7,0,2:NULL:6,1|12,1:79.4565:366.612,131.36:1.34033,1.34033:0.235741,0.502044,0.26226	0/0:19:0.9442:15,15:14-15,14-15:8,5,0,5:15,8:5,1|9,2|10,1|11,1:120.392:326.675,113.385:0.195027,0.195027:3.1254e-15,0.0284693,0.971582
+chr1	9003186	.	TCTATCTATCTATCTA	.	.	.	END=9003201;RU=tcta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.338585:4,4:1-4,1-4:3,6,0,0:4,3:NULL:67.7316:366.612,131.36:0.645921,0.645921:0.000190663,0.405217,0.594663	0/0:13:0.986866:4,4:4-4,4-4:10,3,0,0:4,10:NULL:68.9658:326.675,113.385:0.0,0.0:3.03064e-13,0.00828464,0.991734
+chr1	9007831	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9007856;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.468166:26,26:25-26,25-26:4,14,0,4:26,4:10,1|15,1|16,1|23,1:181.784:366.612,131.36:0.539944,0.539944:0.0,0.0,1.0	0/0:33:0.858364:13,13:12-14,12-14:21,8,0,4:12,5|13,14|14,2:9,1|11,2|12,1:214.993:326.675,113.385:0.560784,0.560784:4.82571e-17,0.137341,0.862749
+chr1	9008428	.	TATTTATTTATT	.	.	.	END=9008439;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:196.612:366.612,131.36:0.0,0.0:0.0,2.74101e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:193.865:326.675,113.385:0.0,0.0:0.0,2.09592e-07,1.0
+chr1	9010782	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATAT,ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9010839;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0877655:3,3:1-4,1-4:0,6,0,0:NULL:NULL:54.7806:366.612,131.36:1.06139,1.06139:1.0,0.0,0.0	2/2:6:0.0249467:22,22:22-25,22-25:0,3,0,2:NULL:5,1|19,1:40.9669:326.675,113.385:1.44541,1.44541:1.0,0.0,0.0
+chr1	9010840	.	ACACACACACACACAC	ACAC	.	.	END=9010855;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00198465:2,2:2-14,2-14:0,6,0,0:NULL:NULL:55.5589:366.612,131.36:5.27203,5.27203:0.0549711,0.404721,0.54048	0/0:5:0.392876:8,8:8-8,8-8:3,2,0,0:8,3:NULL:29.0822:326.675,113.385:0.0,0.0:3.84704e-09,0.321237,0.678776
+chr1	9012172	.	TATATATATATATATATATA	TATATATA	.	.	END=9012191;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00232879:4,4:1-7,1-7:0,6,0,0:NULL:NULL:53.2959:366.612,131.36:1.41352,1.41352:0.142922,0.527029,0.330191	0/0:14:0.886758:10,10:9-10,9-10:7,6,0,0:10,7:NULL:84.391:326.675,113.385:0.398507,0.398507:3.0459e-08,0.0742848,0.925809
+chr1	9015094	.	AAAGAAAGAAAG	.	.	.	END=9015105;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.988736:3,3:3-3,3-3:10,7,0,0:3,10:NULL:108.484:366.612,131.36:0.0,0.0:1.22412e-30,0.00610427,0.99391	0/0:35:0.99985:3,3:3-3,3-3:16,19,0,0:3,16:NULL:229.756:326.675,113.385:0.0,0.0:0.0,0.000113049,0.999888
+chr1	9015582	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9015617;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:48:0.879977:11,12:11-11,11-12:24,18,0,6:10,4|11,20:5,2|7,1|8,2|12,1:332.225:366.612,131.36:0.0,0.537944:1.0,0.0,0.0	0/0:42:0.840554:18,18:11-18,11-18:10,15,0,15:17,2|18,8:5,3|8,1|10,1|12,2|13,2|15,3|16,1|17,1|18,1:307.155:326.675,113.385:2.7477,2.7477:7.32886e-17,0.147725,0.852355
+chr1	9020212	.	GAATGAATGAATGAATGAATGAAT	GAATGAATGAAT,GAATGAATGAATGAAT	.	.	END=9020235;RU=gaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.946082:3,4:2-3,2-4:8,14,0,2:3,5|4,3:3,2:183.765:366.612,131.36:0.275098,0.776833:0.999713,0.000286357,8.49709e-27	0/0:23:0.999425:6,6:6-6,6-6:15,8,0,0:6,15:NULL:135.366:326.675,113.385:0.0,0.0:1.88457e-16,0.000431303,0.999569
+chr1	9021852	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9021905;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0340543:30,30:26-30,26-30:0,7,0,6:NULL:5,1|8,1|9,1|10,1|22,1|26,1:110.405:366.612,131.36:1.08568,1.08568:0.0470722,0.36094,0.592117	1/1:20:0.0477433:26,26:26-27,26-27:0,7,0,11:NULL:8,1|10,1|12,1|13,1|14,1|15,1|16,1|24,2|26,2:156.553:326.675,113.385:0.534653,0.534653:0.0916676,0.439076,0.469425
+chr1	9022665	.	TGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=9022689;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.149837:9,9:6-9,6-9:2,14,0,4:9,2:3,2|5,2:165.398:366.612,131.36:1.43267,1.43267:0.0,0.0,1.0	0/0:36:1.0:5,5:5-5,5-5:26,6,0,4:5,26:2,1|3,2|4,1:189.236:326.675,113.385:0.0,0.0:0.0,6.84067e-08,1.0
+chr1	9025967	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9026010;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.293938:25,25:25-26,25-26:3,10,0,8:25,3:7,1|8,1|11,1|13,1|15,1|20,1|21,1|24,1:172.892:366.612,131.36:0.590584,0.590584:0.0,0.0,1.0	0/0:31:0.84528:22,22:8-23,8-23:7,8,0,11:22,7:5,1|7,1|8,1|9,1|11,1|13,1|14,1|18,2|19,2:191.718:326.675,113.385:4.31912,4.31912:4.1625e-08,0.0753746,0.924719
+chr1	9027019	.	TTTATTTATTTA	TTTATTTATTTATTTA	.	.	END=9027030;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999559:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.767:366.612,131.36:0.0,0.0:1e-45,0.000217421,0.999787	0/0:17:0.985866:3,3:3-3,3-3:9,6,0,2:3,9:2,2:101.237:326.675,113.385:0.0,0.0:1.1158e-20,0.00535034,0.994663
+chr1	9029369	.	ATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9029380;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:3:0.000321662:27,57:14-77,14-76:0,3,0,0:NULL:NULL:26.0914:366.612,131.36:24.3716,23.0378:0.00111219,0.0825436,0.916443	0/0:31:0.994092:6,6:4-7,4-7:19,10,0,0:6,17|7,2:NULL:171.876:326.675,113.385:0.397522,0.397522:1.02527e-22,4.64167e-05,0.999956
+chr1	9029380	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9029417;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.216645:17,17:16-17,16-17:2,2,0,3:17,2:7,1|9,1|10,1:49.2363:366.612,131.36:0.607279,0.607279:0.765264,0.234492,0.000271143	0/0:46:0.977209:19,19:17-20,17-20:18,16,0,11:19,16|20,2:5,2|9,2|10,1|13,1|16,1|17,1|18,2|19,1:315.247:326.675,113.385:0.483833,0.483833:1.89571e-33,1.92268e-05,0.99998
+chr1	9029844	.	CAACAACAACAACAA	CAACAACAACAA	.	.	END=9029858;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.0:4,4:4-4,4-4:23,8,0,0:4,23:NULL:165.026:366.612,131.36:0.0,0.0:1.0,4.87866e-07,0.0	0/0:40:1.0:5,5:5-5,5-5:23,13,0,4:5,23:3,1|4,3:240.983:326.675,113.385:0.0,0.0:0.0,3.9763e-07,1.0
+chr1	9036620	.	TTGCTTGCTTGC	.	.	.	END=9036631;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:258.932:366.612,131.36:0.0,0.0:0.0,2.43865e-07,1.0	0/0:31:0.999979:3,3:3-3,3-3:18,11,0,2:3,18:2,2:189.103:326.675,113.385:0.0,0.0:0.0,1.8714e-05,0.999985
+chr1	9037227	.	TTGTTTGTTTGT	.	.	.	END=9037238;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.987905:3,3:3-3,3-3:10,26,0,0:3,10:NULL:281.733:366.612,131.36:0.0,0.0:6.40431e-34,0.00634645,0.993669	0/0:25:0.999784:3,3:3-3,3-3:15,8,0,2:3,15:2,2:141.515:326.675,113.385:0.0,0.0:0.0,9.43857e-05,0.999909
+chr1	9044406	.	TATATATATATA	.	.	.	END=9044417;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999311:6,6:6-6,6-6:14,14,0,0:6,14:NULL:185.079:366.612,131.36:0.0,0.0:6.79552e-31,0.000474014,0.999529	0/0:24:0.957473:6,6:6-6,6-6:9,15,0,0:6,9:NULL:171.372:326.675,113.385:0.0,0.0:1.20608e-19,0.0299865,0.970067
+chr1	9044826	.	CTTTTCTTTTCTTTTCTTTT	CTTTT	.	.	END=9044845;RU=ctttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:30:0.999993:4,4:4-4,4-4:19,9,0,2:4,19:3,2:174.322:326.675,113.385:0.0,0.0:0.0,1.1877e-05,0.999987
+chr1	9051415	.	TTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=9051434;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0162539:1,1:1-2,1-2:0,9,0,0:NULL:NULL:76.295:366.612,131.36:0.465241,0.465241:0.194826,0.531917,0.273329	0/0:40:1.0:5,5:5-5,5-5:30,10,0,0:5,30:NULL:213.903:326.675,113.385:0.0,0.0:0.0,7.71664e-09,1.0
+chr1	9052040	.	ATATATATATATAT	ATATATATATAT	.	.	END=9052053;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998463:6,6:6-6,6-6:13,23,0,0:6,13:NULL:267.562:366.612,131.36:0.0,0.0:0.999553,0.000449969,6.37458e-27	0/0:14:0.974584:7,7:7-7,7-7:9,5,0,0:7,9:NULL:79.1573:326.675,113.385:0.0,0.0:2.30478e-15,0.0141506,0.985881
+chr1	9054350	.	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	.	.	END=9054388;RU=gtg;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:0.999893:11,11:11-11,11-11:18,30,0,12:11,18:4,2|5,1|6,1|7,1|8,4|10,3:444.343:366.612,131.36:0.0990099,0.0990099:0.999963,4.02213e-05,2.23574e-35	0/0:43:0.97978:13,13:12-13,12-13:17,17,0,9:12,2|13,15:3,2|4,2|5,1|6,1|8,1|9,2:304.92:326.675,113.385:0.334882,0.334882:9.55963e-30,0.0202098,0.979833
+chr1	9055550	.	GAGAGAGAGAGA	.	.	.	END=9055561;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999743:6,6:6-6,6-6:15,12,0,0:6,15:NULL:169.215:366.612,131.36:0.0,0.0:1.53773e-33,0.0001457,0.999857	0/0:23:0.999908:6,6:6-6,6-6:17,6,0,0:6,17:NULL:124.175:326.675,113.385:0.0,0.0:2.18165e-37,5.48361e-05,0.999948
+chr1	9057035	.	ACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9057070;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.697452:25,25:25-25,25-25:5,15,0,7:25,5:10,1|12,1|13,2|14,1|16,1|23,1:220.418:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:36:0.897055:18,18:17-18,17-18:12,10,0,14:17,3|18,9:5,2|7,1|8,1|9,1|10,2|11,1|13,2|14,1|15,1|16,1|17,1:260.454:326.675,113.385:0.345543,0.345543:3.99221e-10,0.0980294,0.902074
+chr1	9065820	.	ACCCACCCACCC	.	.	.	END=9065831;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.721236:3,3:1-3,1-3:5,20,0,0:3,5:NULL:206.575:366.612,131.36:0.647134,0.647134:1.95027e-15,0.215081,0.784963	0/0:30:0.977326:3,3:3-3,3-3:9,21,0,0:3,9:NULL:225.439:326.675,113.385:0.0,0.0:8.67199e-27,0.0162112,0.983822
+chr1	9066850	.	TTGTTGTTGTTG	.	.	.	END=9066861;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999984:4,4:4-4,4-4:18,12,0,0:4,18:NULL:188.271:366.612,131.36:0.0,0.0:0.0,2.54679e-05,0.999978	0/0:34:0.99999:4,4:4-4,4-4:18,13,0,3:4,18:3,3:216.888:326.675,113.385:0.0,0.0:0.0,1.61757e-05,0.999986
+chr1	9077038	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=9077077;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.290493:11,15:11-11,11-16:14,10,0,10:10,2|11,12:6,2|7,2|8,2|9,1|11,1|12,1|14,1:248.852:366.612,131.36:0.0,1.72902:1.0,0.0,0.0	3/0:41:0.992087:19,20:19-22,20-20:15,9,0,16:19,7|20,8:4,2|5,2|10,2|11,1|13,1|14,2|16,2|17,1|18,2|19,1:283.071:326.675,113.385:0.914864,0.19802:3.63782e-08,0.992064,0.0079529
+chr1	9080272	.	AAAGGAAAAGGAAAAGGA	.	.	.	END=9080289;RU=aaagga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:206.352:366.612,131.36:0.0,0.0:0.0,5.27149e-06,0.999995	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:167.245:326.675,113.385:0.0,0.0:0.0,1.10308e-07,1.0
+chr1	9093163	.	CAACAACAACAA	.	.	.	END=9093174;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:27,10,0,0:4,27:NULL:201.787:366.612,131.36:0.0,0.0:0.0,6.24979e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:23,7,0,2:4,23:3,2:169.731:326.675,113.385:0.0,0.0:0.0,4.45989e-07,1.0
+chr1	9101067	.	TAAATAAATAAA	.	.	.	END=9101078;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:26,18,0,2:3,26:2,2:283.387:366.612,131.36:0.0,0.0:0.0,6.84041e-08,1.0	0/0:33:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:202.305:326.675,113.385:0.0,0.0:0.0,1.23536e-05,0.999987
+chr1	9101909	.	GATGGATGGATGGATGGATGGATGGATGGATGGATGGATG	.	.	.	END=9101948;RU=gatg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.909487:10,10:10-10,10-10:7,11,0,2:10,7:5,1|8,1:150.22:366.612,131.36:0.0,0.0:1.72265e-19,0.06029,0.9398	0/0:37:0.999347:10,10:6-10,6-10:14,12,0,10:10,14:4,3|5,2|6,1|8,2|9,2:243.867:326.675,113.385:1.80969,1.80969:3.52163e-38,0.00031278,0.999689
+chr1	9101975	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	END=9102022;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.998561:11,11:10-11,10-11:13,13,0,12:11,13:4,1|6,2|8,1|9,2|10,6:266.263:366.612,131.36:0.323567,0.323567:0.999219,0.000782351,4.25651e-20	0/0:43:0.999885:12,12:12-12,12-12:17,13,0,12:12,17:2,1|3,1|4,2|5,1|6,1|7,2|8,2|11,2:282.169:326.675,113.385:0.139319,0.139319:1.82656e-35,6.6536e-05,0.999934
+chr1	9103931	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9103958;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.848607:19,19:17-20,17-20:14,13,0,15:19,12|20,2:5,1|7,2|8,1|9,1|13,1|14,1|15,2|16,4|18,2:305.51:366.612,131.36:0.586587,0.586587:0.0,0.0,1.0	0/0:33:0.9842:14,14:12-14,12-14:10,10,0,12:14,10:4,1|5,4|6,4|9,1|11,1|13,1:235.664:326.675,113.385:0.765392,0.765392:4.05923e-13,0.0066438,0.99337
+chr1	9104117	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=9104156;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.99989:9,9:9-9,9-9:16,11,0,7:9,16:2,1|3,1|4,1|5,1|7,1|8,2:220.223:366.612,131.36:0.0,0.0:0.0,2.07957e-05,0.999979	0/0:37:0.999927:8,8:8-8,8-8:17,14,0,6:8,17:3,3|4,2|6,1:241.36:326.675,113.385:0.0,0.0:0.0,6.51563e-05,0.999934
+chr1	9108162	.	AATCAATCAATCAATC	.	.	.	END=9108177;RU=aatc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:179.28:366.612,131.36:0.0,0.0:0.0,7.04389e-06,0.999994	0/0:41:1.00001:4,4:4-4,4-4:22,14,0,5:4,22:2,1|3,4:248.72:326.675,113.385:0.0,0.0:0.0,9.11744e-07,1.0
+chr1	9118041	.	TTTATTTATTTA	.	.	.	END=9118052;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.997525:3,3:3-3,3-3:13,17,0,0:3,13:NULL:208.579:366.612,131.36:0.0,0.0:3.4895e-41,0.00174604,0.998261	0/0:23:1.0:3,3:3-3,3-3:19,2,0,2:3,19:2,2:106.128:326.675,113.385:0.0,0.0:0.0,5.02187e-06,0.999995
+chr1	9118141	.	CCCACCCACCCACCCACCCACCCA	.	.	.	END=9118164;RU=ccca;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.964596:6,6:6-6,6-6:8,10,0,4:6,8:3,1|4,1|5,2:153.156:366.612,131.36:0.0,0.0:1.70703e-22,0.0190878,0.980953	0/0:19:0.969243:6,6:6-6,6-6:8,4,0,7:6,8:2,1|3,3|5,3:117.826:326.675,113.385:0.0,0.0:7.17771e-23,0.0105606,0.989462
+chr1	9127223	.	TATATATATATATATA	.	.	.	END=9127238;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999925:8,8:8-8,8-8:18,9,0,0:8,18:NULL:156.836:366.612,131.36:0.0990099,0.0990099:1.19149e-23,4.76761e-05,0.999955	0/0:22:0.66523:8,8:8-8,8-8:5,17,0,0:8,5:NULL:181.379:326.675,113.385:0.0,0.0:3.98815e-07,0.190437,0.809619
+chr1	9130256	.	CATCATCATCATCAT	.	.	.	END=9130270;RU=cat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999986:5,5:5-5,5-5:18,11,0,0:5,18:NULL:173.323:366.612,131.36:0.0,0.0:0.0,2.12812e-05,0.999979	0/0:43:1.0:5,5:5-5,5-5:25,14,0,4:5,25:3,1|4,3:257.681:326.675,113.385:0.0,0.0:0.0,6.90025e-08,1.0
+chr1	9131824	.	TAAATAAATAAA	.	.	.	END=9131835;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999531:3,3:3-3,3-3:14,15,0,0:3,14:NULL:188.824:366.612,131.36:0.0,0.0:0.0,0.000294935,0.999706	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.923:326.675,113.385:0.0,0.0:0.0,3.12728e-06,1.0
+chr1	9133465	.	AAGCAAGCAAGC	AAGCAAGC	.	.	END=9133476;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999676:2,2:2-2,2-2:15,10,0,0:2,15:NULL:151.462:366.612,131.36:0.0,0.0:0.999812,0.000188883,2.7e-43	0/0:32:0.999907:3,3:3-3,3-3:17,15,0,0:3,17:NULL:200.299:326.675,113.385:0.0,0.0:0.0,6.32466e-05,0.99994
+chr1	9142553	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9142586;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0344154:35,35:4-38,4-38:0,11,0,9:NULL:14,1|18,2|22,1|23,1|32,2|35,2:177.59:366.612,131.36:8.20969,8.20969:0.0,0.0698149,0.930281	0/0:40:0.325667:17,17:16-20,16-20:25,6,0,8:16,6|17,19:5,1|6,1|7,1|10,1|11,1|12,1|15,1|20,1:259.707:326.675,113.385:1.49914,1.49914:9.32892e-22,0.0031623,0.996845
+chr1	9143268	.	AATAAATAAATA	.	.	.	END=9143279;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.988991:3,3:3-3,3-3:10,13,0,0:3,10:NULL:156.669:366.612,131.36:0.0,0.0:1.49166e-29,0.00640972,0.993603	0/0:40:1.0:3,3:3-3,3-3:19,17,0,4:3,19:2,4:255.414:326.675,113.385:0.0,0.0:0.0,6.32514e-06,0.999994
+chr1	9154316	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9154355;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.88495:17,17:16-18,16-18:19,19,0,9:16,5|17,12|18,2:6,2|7,1|8,1|9,1|11,1|12,1|14,1|17,1:345.099:366.612,131.36:0.575792,0.575792:0.999988,1.14857e-05,1.63775e-36	0/2:35:0.272305:20,37:20-20,19-39:15,8,0,11:19,2|20,13:7,1|10,2|12,2|14,1|15,1|17,1|19,2|36,1:242.669:326.675,113.385:0.0990099,8.55464:2.43813e-16,1.05788e-05,0.999993
+chr1	9155619	.	ATAAATAAATAA	.	.	.	END=9155630;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999851:3,3:3-3,3-3:16,12,0,0:3,16:NULL:169.846:366.612,131.36:0.0,0.0:1.05e-43,8.45388e-05,0.999918	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:138.642:326.675,113.385:0.0,0.0:0.0,4.30834e-06,0.999995
+chr1	9156170	.	TTTGTTTGTTTG	.	.	.	END=9156181;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999834:3,3:2-3,2-3:16,5,0,0:3,16:NULL:107.347:366.612,131.36:0.345543,0.345543:0.0,8.75503e-05,0.999917	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:175.6:326.675,113.385:0.0,0.0:0.0,4.95853e-06,0.999995
+chr1	9156695	.	GATGATGATGATGATGAT	.	.	.	END=9156712;RU=gat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999953:6,6:5-6,5-6:18,25,0,5:6,18:4,2|5,3:340.272:366.612,131.36:0.236383,0.236383:1.4e-44,1.58438e-05,0.999986	0/0:36:0.999722:6,6:6-6,6-6:15,16,0,5:6,15:3,1|4,2|5,2:250.053:326.675,113.385:0.0,0.0:4.94222e-37,0.000153961,0.999849
+chr1	9157471	.	TGGTTGGTTGGTTGGTTGGTTGGT	.	.	.	END=9157494;RU=tggt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:6,6:6-6,6-6:19,16,0,6:6,19:2,1|3,2|4,1|5,2:269.107:366.612,131.36:0.0,0.0:0.0,8.59828e-06,0.999994	0/0:41:0.999594:6,6:5-6,5-6:14,19,0,7:6,14:3,1|4,5|5,1:286.031:326.675,113.385:0.334882,0.334882:0.0,0.000298026,0.999705
+chr1	9158960	.	AACAACAACAACAAC	AACAACAACAACAACAACAAC	.	.	END=9158974;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.987689:7,7:7-7,7-7:10,17,0,6:7,10:3,1|4,2|5,1|6,2:247.771:366.612,131.36:0.29703,0.29703:0.0,0.00145246,0.998551	0/0:27:1.0:5,5:5-5,5-5:19,6,0,2:5,19:4,2:146.829:326.675,113.385:0.0,0.0:0.0,7.46421e-06,0.999994
+chr1	9164239	.	CAACAACAACAA	.	.	.	END=9164250;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.984929:4,4:4-4,4-4:10,22,0,0:4,10:NULL:242.204:366.612,131.36:0.0,0.0:2.12531e-29,0.0121012,0.987928	0/0:39:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:226.222:326.675,113.385:0.0,0.0:0.0,5.94517e-07,1.0
+chr1	9167899	.	AACAAAAACAAAAACAAA	.	.	.	END=9167916;RU=aacaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999676:3,3:3-3,3-3:15,14,0,2:3,15:2,1|3,1:208.483:366.612,131.36:0.0,0.0:0.0,0.000197021,0.999804	0/0:18:0.997682:3,3:3-3,3-3:12,6,0,0:3,12:NULL:107.052:326.675,113.385:0.0,0.0:4.81654e-40,0.00123496,0.99877
+chr1	9168809	.	TGGTGGTGGTGG	.	.	.	END=9168820;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,22,0,0:4,28:NULL:321.123:366.612,131.36:0.0,0.0:0.0,3.43302e-08,1.0	0/0:39:1.00001:4,4:4-4,4-4:21,16,0,2:4,21:3,2:240.021:326.675,113.385:0.0,0.0:0.0,1.95118e-06,1.0
+chr1	9174269	.	AAAATAAAATAAAAT	.	.	.	END=9174283;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998659:3,3:3-3,3-3:13,8,0,0:3,13:NULL:121.529:366.612,131.36:0.0,0.0:4.34e-43,0.000804771,0.999197	0/0:23:0.999924:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.148:326.675,113.385:0.0,0.0:0.0,4.24173e-05,0.999957
+chr1	9185149	.	AAATAAATAAAT	.	.	.	END=9185160;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:188.035:366.612,131.36:0.0,0.0:0.0,1.60488e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:200.239:326.675,113.385:0.0,0.0:0.0,3.84078e-08,1.0
+chr1	9190774	.	TGTTTGTTTGTT	.	.	.	END=9190785;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998971:3,3:3-3,3-3:13,8,0,0:3,13:NULL:126.822:366.612,131.36:0.0,0.0:3.9e-44,0.000613067,0.999392	0/0:28:0.999996:3,3:3-3,3-3:18,7,0,3:3,18:2,3:155.211:326.675,113.385:0.0,0.0:0.0,1.06511e-05,0.999993
+chr1	9192850	.	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG,AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	.	.	END=9192944;RU=aaagg;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0708864:15,15:12-16,12-16:0,10,0,12:NULL:3,1|5,1|6,1|7,2|8,1|9,1|11,1|12,1|13,2|14,1:174.677:366.612,131.36:1.04623,1.04623:1.0,0.0,0.0	2/2:36:0.634562:17,17:9-17,9-17:4,14,0,17:17,4:2,1|5,1|6,2|8,1|9,2|11,1|13,3|14,1|15,3|16,2:270.043:326.675,113.385:3.99824,3.99824:0.88729,0.11281,2.86131e-10
+chr1	9198920	.	ATCCATCCATCC	.	.	.	END=9198931;RU=atcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:20,11,0,2:3,20:2,2:195.498:366.612,131.36:0.0,0.0:0.0,2.88559e-06,1.0	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:247.93:326.675,113.385:0.0,0.0:0.0,1.34858e-07,1.0
+chr1	9200129	.	TTTATTTATTTA	.	.	.	END=9200140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:209.886:366.612,131.36:0.0,0.0:0.0,9.18779e-06,0.999993	0/0:44:1.0:3,3:3-3,3-3:36,6,0,2:3,36:2,2:212.001:326.675,113.385:0.0,0.0:0.0,4.11194e-11,1.0
+chr1	9201395	.	TATATATATATATATATATATATATATATATATATATATA	TATATA	.	.	END=9201434;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00226727:3,3:21-24,21-24:0,2,0,0:NULL:NULL:17.2916:366.612,131.36:1.13521,1.13521:0.516699,0.405381,0.0780363	0/0:9:0.134691:20,20:19-22,19-22:2,4,0,0:20,2:NULL:51.6454:326.675,113.385:0.765776,0.765776:0.00662868,0.410622,0.58284
+chr1	9203282	.	AGTCAGTCAGTC	.	.	.	END=9203293;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:19,15,0,2:3,19:2,2:229.987:366.612,131.36:0.0,0.0:0.0,5.45693e-06,0.999995	0/0:40:1.00001:3,3:3-3,3-3:20,15,0,5:3,20:2,5:257.356:326.675,113.385:0.0,0.0:0.0,3.54959e-06,1.0
+chr1	9204564	.	TCATCATCATCA	.	.	.	END=9204575;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:217.629:366.612,131.36:0.0,0.0:0.0,2.91543e-07,1.0	0/0:31:0.999999:4,4:4-4,4-4:18,8,0,5:4,18:3,5:181.185:326.675,113.385:0.0,0.0:0.0,8.05792e-06,0.999994
+chr1	9211529	.	CAAAACAAAACAAAA	.	.	.	END=9211543;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:2-3,2-3:21,12,0,2:3,21:2,2:212.916:366.612,131.36:0.374147,0.374147:0.0,2.66644e-06,1.0	0/0:26:0.999935:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.809:326.675,113.385:0.0,0.0:0.0,4.89388e-05,0.999955
+chr1	9211779	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACAC	.	.	END=9211816;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.913569:14,14:13-14,13-14:11,9,0,15:13,2|14,9:4,1|5,1|6,2|7,1|9,1|10,2|11,4|12,2|13,1:254.655:366.612,131.36:0.345543,0.345543:1.0,0.0,0.0	0/0:29:0.814705:19,19:18-20,18-20:6,12,0,9:19,6:6,1|7,2|14,1|15,1|16,2|18,2:206.507:326.675,113.385:0.55233,0.55233:1.1296e-08,0.0586354,0.941447
+chr1	9216945	.	GAGGGAGGGAGG	.	.	.	END=9216956;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:247.435:366.612,131.36:0.0,0.0:0.0,4.13697e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:193.378:326.675,113.385:0.0,0.0:0.0,3.34687e-06,1.0
+chr1	9218068	.	AATTAATTAATT	.	.	.	END=9218079;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.995878:3,3:3-3,3-3:11,8,0,0:3,11:NULL:117.08:366.612,131.36:0.0,0.0:4.43428e-34,0.00242352,0.997586	0/0:24:0.999921:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.889:326.675,113.385:0.0,0.0:0.0,4.7444e-05,0.999955
+chr1	9225255	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	END=9225306;RU=gaaa;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:33:0.999997:13,14:13-14,14-14:12,13,0,8:13,5|14,7:4,1|6,2|8,2|11,2|12,1:234.093:366.612,131.36:0.169767,0.0:1.91211e-24,1.68997e-08,1.0	0/0:33:0.838936:13,13:5-13,5-13:6,14,0,12:13,6:2,1|3,1|4,2|6,1|8,1|9,1|10,3|11,1|12,1:248.732:326.675,113.385:4.05346,4.05346:4.40474e-13,0.112307,0.88779
+chr1	9226135	.	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATA,ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9226188;RU=ata;PERIOD=3;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.998211:10,10:9-11,9-11:13,24,0,9:10,13:3,2|6,1|7,3|8,1|9,2:335.221:366.612,131.36:0.312156,0.312156:1.0,0.0,0.0	2/0:22:0.990369:17,18:16-18,16-18:7,5,0,9:17,3|18,4:4,1|5,1|7,3|8,1|9,1|14,1|16,1:147.675:326.675,113.385:0.480988,0.363786:6.80332e-05,0.991309,0.00864358
+chr1	9227593	.	TGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9227613;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.967829:7,7:7-7,7-7:8,9,0,3:7,8:5,1|6,2:136.638:366.612,131.36:0.0,0.0:4.71476e-15,0.00994836,0.990074	0/0:18:0.996976:7,7:6-7,6-7:12,3,0,2:7,12:5,1|6,1:91.0383:326.675,113.385:0.236383,0.236383:7.79232e-22,0.00126966,0.998733
+chr1	9227617	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=9227655;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.953525:13,13:13-13,13-13:8,9,0,4:13,8:6,1|9,1|10,1|12,1:147.325:366.612,131.36:0.0,0.0:7.76344e-13,0.0174828,0.982554	0/0:24:0.945038:13,13:12-13,12-13:8,7,0,8:13,8:3,3|5,1|6,2|7,1|11,1:156.105:326.675,113.385:0.298675,0.298675:1.16214e-12,0.0303655,0.969693
+chr1	9229745	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9229764;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.997521:5,5:5-5,5-5:12,14,0,6:5,12:2,1|3,4|4,1:219.47:366.612,131.36:0.0,0.0:9.983e-42,0.00150345,0.998503	0/0:35:1.00001:5,5:5-5,5-5:21,11,0,3:5,21:3,1|4,2:208.109:326.675,113.385:0.0,0.0:0.0,2.10188e-06,1.0
+chr1	9235751	.	TCTGATGTCTGTGTTCTGATGTCTGTGTTCTGATGTCTGTGT	.	.	.	END=9235792;RU=tctgatgtctgtgt;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.995393:3,3:3-3,3-3:15,24,0,0:3,15:NULL:287.148:366.612,131.36:0.0,0.0:1.91692e-17,0.00460891,0.995402	0/0:26:0.801702:3,3:1-3,1-3:8,18,0,0:3,8:NULL:202.589:326.675,113.385:0.569802,0.569802:1.96275e-09,0.194535,0.805516
+chr1	9247060	.	GGGTGGGTGGGT	.	.	.	END=9247071;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.828891:3,3:3-3,3-3:6,23,0,0:3,6:NULL:223.101:366.612,131.36:0.19802,0.19802:2.50678e-18,0.110301,0.889796	0/0:23:0.959299:3,3:3-3,3-3:8,15,0,0:3,8:NULL:165.037:326.675,113.385:0.0,0.0:1.89467e-24,0.0252493,0.9748
+chr1	9251161	.	AAATAAATAAAT	.	.	.	END=9251172;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997824:3,3:3-3,3-3:13,21,0,0:3,13:NULL:250.863:366.612,131.36:0.0,0.0:1.0388e-41,0.00169011,0.998315	0/0:26:0.999524:3,3:3-3,3-3:14,12,0,0:3,14:NULL:160.371:326.675,113.385:0.0,0.0:1e-45,0.000271586,0.999729
+chr1	9252401	.	AGAGAGAGAGAG	.	.	.	END=9252412;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999986:6,6:6-6,6-6:19,25,0,5:6,19:4,3|5,2:348.615:366.612,131.36:0.0,0.0:0.0,9.15573e-06,0.999993	0/0:37:1.0:6,6:6-6,6-6:24,13,0,0:6,24:NULL:213.251:326.675,113.385:0.0,0.0:0.0,5.19551e-07,1.0
+chr1	9253812	.	TAAATAAATAAA	.	.	.	END=9253823;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:216.651:366.612,131.36:0.0,0.0:0.0,5.9982e-06,0.999995	0/0:28:1.0:3,3:3-3,3-3:24,4,0,0:3,24:NULL:130.617:326.675,113.385:0.0,0.0:0.0,2.63531e-07,1.0
+chr1	9257431	.	AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAG	AGACAGAGACAGAGACAGAGACAG	.	.	END=9257472;RU=agacag;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999995:4,4:4-4,4-4:19,18,0,4:4,19:2,3|3,1:271.847:366.612,131.36:0.0,0.0:1.0,8.86764e-07,0.0	0/0:44:0.999974:7,7:7-7,7-7:18,16,0,10:7,18:4,6|6,4:297.01:326.675,113.385:0.0,0.0:0.0,2.37702e-05,0.999979
+chr1	9258341	.	CTTCCTTCCTTCCTTC	.	.	.	END=9258356;RU=cttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:24,17,0,0:4,24:NULL:255.707:366.612,131.36:0.0,0.0:0.0,1.40646e-06,1.0	0/0:47:1.0:4,4:4-4,4-4:25,22,0,0:4,25:NULL:303.27:326.675,113.385:0.0,0.0:0.0,5.21673e-07,1.0
+chr1	9260912	.	AAGAAAAGAAAAGAA	.	.	.	END=9260926;RU=aagaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,12,0,0:3,30:NULL:231.624:366.612,131.36:0.0,0.0:0.0,3.85823e-09,1.0	0/0:29:1.0:3,3:3-3,3-3:25,4,0,0:3,25:NULL:137.727:326.675,113.385:0.0,0.0:0.0,1.41967e-07,1.0
+chr1	9273522	.	TTGATTGATTGATTGATTGATTGATTGA	.	.	.	END=9273549;RU=ttga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:7,7:7-7,7-7:36,23,0,7:7,36:2,3|5,3|6,1:408.576:366.612,131.36:0.0,0.0:0.0,1.05388e-10,1.0	0/0:63:1.0:7,7:7-7,7-7:34,21,0,7:7,34:2,2|3,3|5,1|6,1:399.62:326.675,113.385:0.0,0.0:0.0,1.36727e-09,1.0
+chr1	9274125	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9274170;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:49:0.28917:18,28:18-18,18-30:17,16,0,14:17,2|18,15:5,1|6,1|7,1|9,2|10,2|13,1|15,2|16,1|17,2|28,1:348.667:366.612,131.36:0.0,5.02939:0.00361416,0.996398,7e-45	2/0:44:0.956737:22,23:19-23,23-23:15,14,0,14:21,2|22,5|23,8:5,1|8,2|9,2|10,1|12,1|13,1|16,5|21,1:320.63:326.675,113.385:0.899847,0.39604:5.11288e-07,0.96099,0.0390799
+chr1	9277902	.	ATATATATATATATAT	.	.	.	END=9277917;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.988758:8,8:8-9,8-9:11,11,0,0:8,11:NULL:149.074:366.612,131.36:0.253975,0.253975:2.95112e-15,0.00717039,0.992844	0/0:21:0.999429:8,8:8-8,8-8:15,5,0,0:8,15:NULL:105.87:326.675,113.385:0.0,0.0:8.80438e-21,0.000358104,0.999644
+chr1	9279853	.	ATACATACATACATAC	.	.	.	END=9279868;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:23,18,0,2:4,23:3,2:269.686:366.612,131.36:0.0,0.0:0.0,7.3893e-07,1.0	0/0:38:1.00001:4,4:4-4,4-4:22,12,0,4:4,22:2,2|3,2:224.55:326.675,113.385:0.0,0.0:0.0,8.97549e-07,1.0
+chr1	9281951	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9281994;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.838921:21,21:20-21,20-21:7,10,0,11:21,7:5,1|7,1|10,3|12,1|13,1|14,1|16,2|18,1:207.014:366.612,131.36:0.253975,0.253975:0.911248,0.0888383,1.37494e-05	0/0:43:0.998108:22,22:22-22,22-22:14,11,0,18:22,14:6,1|8,1|9,3|11,2|13,1|14,1|15,2|18,1|19,2|20,2|21,2:309.278:326.675,113.385:0.0,0.0:1.38778e-17,0.000334466,0.999667
+chr1	9282129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9282164;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.276294:24,27:23-25,23-27:5,15,0,15:23,2|24,3:5,1|6,1|9,1|10,1|12,1|15,3|16,1|17,1|18,1|23,3|26,1:284.08:366.612,131.36:0.459943,1.26972:0.0,0.0,1.0	0/0:41:0.989568:18,18:17-18,17-18:19,12,0,8:17,4|18,15:4,1|6,1|9,1|10,1|14,1|16,1|17,1|18,1:261.136:326.675,113.385:0.290354,0.290354:1.77746e-23,0.0103277,0.989694
+chr1	9285357	.	TTTATTTATTTA	.	.	.	END=9285368;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:232.842:366.612,131.36:0.0,0.0:0.0,4.84406e-06,0.999995	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.413:326.675,113.385:0.0,0.0:0.0,4.26591e-06,0.999995
+chr1	9286427	.	TTTTATTTTATTTTA	.	.	.	END=9286441;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:20,15,0,2:3,20:2,2:228.55:366.612,131.36:0.0,0.0:0.0,3.13928e-06,1.0	0/0:21:0.989896:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.98:326.675,113.385:0.0,0.0:1.23609e-32,0.00643952,0.993578
+chr1	9289377	.	TATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=9289400;RU=tatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999907:9,9:1-9,1-9:16,18,0,14:9,16:3,1|5,3|6,3|7,3|8,4:326.474:366.612,131.36:3.40502,3.40502:0.0,1.19741e-07,1.0	0/0:20:0.997387:6,6:6-6,6-6:12,4,0,4:6,12:3,2|4,1|5,1:114.495:326.675,113.385:0.0,0.0:1.98832e-30,0.00113359,0.998869
+chr1	9290815	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9290852;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:0.967706:19,19:18-19,18-19:15,18,0,13:18,3|19,12:5,1|8,1|9,1|10,2|11,1|13,3|15,1|16,1|17,1|18,1:340.356:366.612,131.36:0.399735,0.399735:1.49956e-12,0.0314958,0.968563	0/0:25:0.655712:19,19:11-20,11-20:5,9,0,8:19,5:5,2|7,1|12,1|14,1|15,1|18,2:166.296:326.675,113.385:3.94512,3.94512:1.10631e-06,0.124407,0.875694
+chr1	9296627	.	ATTAATTAATTA	.	.	.	END=9296638;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999935:3,3:3-3,3-3:16,12,0,3:3,16:2,3:190.493:366.612,131.36:0.0,0.0:0.0,3.03256e-05,0.999971	0/0:43:1.00001:3,3:3-3,3-3:21,19,0,3:3,21:2,3:278.445:326.675,113.385:0.0,0.0:0.0,1.42207e-06,1.0
+chr1	9296985	.	AAAGAAAGAAAG	.	.	.	END=9296996;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:240.218:366.612,131.36:0.0,0.0:0.0,2.7802e-07,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:190.06:326.675,113.385:0.0,0.0:0.0,6.452e-07,1.0
+chr1	9301041	.	TAAATAAATAAA	.	.	.	END=9301052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.992895:3,3:3-3,3-3:10,11,0,0:3,10:NULL:142.384:366.612,131.36:0.0,0.0:4.71169e-33,0.0039423,0.996067	0/0:28:0.999938:3,3:3-3,3-3:17,9,0,2:3,17:2,2:162.806:326.675,113.385:0.0,0.0:0.0,2.85568e-05,0.999972
+chr1	9302120	.	CACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACA	.	.	END=9302159;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.938087:18,19:16-19,18-20:10,23,0,10:18,5|19,5:7,1|8,1|11,1|13,1|15,1|16,3|18,1|19,1:334.803:366.612,131.36:0.667418,0.371782:0.997883,0.00212291,4.80765e-08	0/0:49:0.990551:20,20:19-20,19-20:14,18,0,15:19,2|20,12:8,2|10,1|12,2|14,1|15,1|16,4|18,2|19,1|20,1:349.293:326.675,113.385:0.390054,0.390054:4.34398e-19,0.00830726,0.991711
+chr1	9302309	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9302354;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.993142:19,19:18-19,18-19:20,16,0,8:18,3|19,17:6,1|7,1|8,1|10,1|12,1|15,1|16,1|18,1:304.203:366.612,131.36:0.275098,0.275098:1.0,0.0,0.0	0/2:49:0.303115:23,38:23-23,2-39:13,15,0,18:21,2|23,9|24,2:6,1|7,1|8,1|9,1|10,1|12,2|14,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|32,1|38,1:361.606:326.675,113.385:0.243733,12.4842:8.54821e-26,9.88519e-09,1.0
+chr1	9307495	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA,TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=9307558;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.84055:17,17:16-17,16-17:6,12,0,10:17,6:3,1|5,1|6,1|8,1|13,2|14,2|15,2:211.044:366.612,131.36:0.425627,0.425627:3.8558e-15,0.0676248,0.93247	1/1:36:0.997979:15,15:14-15,14-15:13,9,0,13:15,13:5,1|7,1|8,3|9,3|10,2|13,2|14,1:237.268:326.675,113.385:0.253975,0.253975:0.998922,0.00108148,1.56142e-16
+chr1	9310514	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9310563;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.486569:25,25:22-26,22-26:11,10,0,19:24,2|25,7|26,2:8,1|9,2|11,4|13,1|14,1|16,1|17,1|18,1|19,1|20,1|22,1|23,2|24,2:299.975:366.612,131.36:1.02923,1.02923:2.07079e-08,0.0369271,0.963139	0/1:31:0.298027:25,35:24-25,24-35:8,11,0,12:24,2|25,6:5,1|9,2|10,1|11,1|12,1|13,1|15,1|20,1|23,1|24,1|34,1:247.892:326.675,113.385:0.169767,4.95744:5.61813e-11,1.06178e-05,0.999993
+chr1	9314806	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9314831;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:39:0.768871:23,24:23-24,24-24:9,13,0,17:23,3|24,6:4,1|5,1|6,2|7,1|9,2|10,2|11,3|16,2|17,1|19,1|20,1:301.593:366.612,131.36:0.499975,0.0:0.0,0.0,1.0	0/1:47:0.856598:13,14:13-13,13-14:22,15,0,10:12,3|13,19:4,1|5,2|6,1|8,1|9,1|11,2|12,1|14,1:329.622:326.675,113.385:0.0,0.515422:7.72604e-23,7.13848e-06,0.999994
+chr1	9318491	.	TATATATATATATA	.	.	.	END=9318504;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:7,7:7-7,7-7:26,17,0,0:7,26:NULL:263.698:366.612,131.36:0.0,0.0:5.19875e-33,2.97156e-07,1.0	0/0:20:0.998886:7,7:6-7,6-7:14,5,0,0:7,14:NULL:101.696:326.675,113.385:0.323567,0.323567:2.86529e-18,0.000686551,0.999317
+chr1	9324727	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=9324744;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99986:3,3:3-3,3-3:17,12,0,0:3,17:NULL:185.029:366.612,131.36:0.0,0.0:0.0,0.000120491,0.99988	0/0:18:0.996535:3,3:3-3,3-3:11,5,0,2:3,11:2,2:100.743:326.675,113.385:0.0,0.0:3.86184e-38,0.00153338,0.998473
+chr1	9326142	.	TCCCTCCCTCCC	.	.	.	END=9326153;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:26,28,0,0:3,26:NULL:358.283:366.612,131.36:0.0,0.0:0.0,3.30543e-07,1.0	0/0:34:0.999349:3,3:3-3,3-3:14,20,0,0:3,14:NULL:244.48:326.675,113.385:0.0,0.0:0.0,0.000523905,0.999477
+chr1	9328079	.	AAACAAACAAAC	.	.	.	END=9328090;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:24,4,0,2:3,24:2,2:148.846:366.612,131.36:0.0,0.0:0.0,1.27146e-07,1.0	0/0:68:1.0:3,3:3-3,3-3:44,21,0,2:3,44:2,2:371.366:326.675,113.385:0.0,0.0:0.0,1.8272e-13,1.0
+chr1	9332135	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTG,TTTGTTTGTTTGTTTGTTTG	.	.	END=9332150;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:48:1.0:3,5:3-3,5-5:27,21,0,0:3,9|5,18:NULL:331.849:366.612,131.36:0.0,0.0:0.0,1.0,1.0768e-11	0/0:31:0.99967:4,4:4-4,4-4:15,12,0,4:4,15:3,4:197.49:326.675,113.385:0.0,0.0:0.0,0.00013273,0.999871
+chr1	9335058	.	TTTTGTTTTGTTTTG	.	.	.	END=9335072;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.304:366.612,131.36:0.0,0.0:0.0,4.31613e-06,0.999995	0/0:29:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:145.745:326.675,113.385:0.0,0.0:0.0,6.17845e-07,1.0
+chr1	9336951	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9336970;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999245:4,4:4-4,4-4:14,17,0,2:4,14:2,1|3,1:230.494:366.612,131.36:0.0,0.0:1e-45,0.000526817,0.999476	0/0:26:0.978285:4,4:3-4,3-4:9,12,0,4:4,9:3,4:176.105:326.675,113.385:0.497026,0.497026:4.14237e-29,0.0118562,0.988168
+chr1	9340284	.	TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC	TGCTGCTGCTGCTGCTGCTGCTGCTGC	.	.	END=9340316;RU=tgc;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999971:9,9:9-9,9-9:18,16,0,5:9,18:4,1|6,2|7,1|8,1:264.09:366.612,131.36:0.0,0.0:0.999993,1.10553e-05,4.96732e-40	0/0:27:0.992223:11,11:11-11,11-11:10,9,0,8:11,10:3,1|4,2|7,1|9,1|10,3:192.427:326.675,113.385:0.0,0.0:2.04128e-27,0.00258091,0.997427
+chr1	9346828	.	TCATCATCATCA	.	.	.	END=9346839;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:41,4,0,0:4,41:NULL:195.359:366.612,131.36:0.0,0.0:0.0,2.65167e-12,1.0	0/0:42:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:257.942:326.675,113.385:0.0,0.0:0.0,6.09121e-07,1.0
+chr1	9348812	.	TTTGTTTTGTTTTGT	TTTGT	.	.	END=9348826;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0735964:1,1:1-4,1-4:0,19,0,0:NULL:NULL:177.141:366.612,131.36:0.883688,0.883688:0.231507,0.512275,0.256255	0/0:23:0.999229:3,3:3-3,3-3:14,9,0,0:3,14:NULL:141.122:326.675,113.385:0.0,0.0:0.0,0.000509649,0.999492
+chr1	9350228	.	ACAGCGACAGCGACAGCG	ACAGCG	.	.	END=9350245;RU=acagcg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.165627:1,1:1-2,1-2:0,21,0,0:NULL:NULL:186.527:366.612,131.36:0.311527,0.311527:0.406392,0.475241,0.118464	0/0:44:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:276.894:326.675,113.385:0.0,0.0:0.0,2.46273e-07,1.0
+chr1	9350646	.	TTTGTTTGTTTG	.	.	.	END=9350657;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999568:3,3:3-3,3-3:15,17,0,0:3,15:NULL:219.527:366.612,131.36:0.0,0.0:1e-45,0.00031849,0.999682	0/0:29:0.999998:3,3:3-3,3-3:18,9,0,2:3,18:2,2:163.919:326.675,113.385:0.0,0.0:0.0,9.79155e-06,0.999993
+chr1	9352617	.	TTTGTTTGTTTG	.	.	.	END=9352628;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:31,16,0,0:3,31:NULL:268.199:366.612,131.36:0.0,0.0:0.0,2.12163e-09,1.0	0/0:54:1.0:3,3:3-3,3-3:39,15,0,0:3,39:NULL:292.504:326.675,113.385:0.0,0.0:0.0,1.07657e-11,1.0
+chr1	9360153	.	TTGTTTGTTTGT	.	.	.	END=9360164;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:250.243:366.612,131.36:0.0,0.0:0.0,9.24726e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:198.994:326.675,113.385:0.0,0.0:0.0,5.31601e-07,1.0
+chr1	9366180	.	TCCCTCCCTCCCTCCC	.	.	.	END=9366195;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999289:4,4:4-4,4-4:15,11,0,0:4,15:NULL:159.697:366.612,131.36:0.0,0.0:0.0,0.00051322,0.999491	0/0:25:1.00001:4,4:4-4,4-4:21,4,0,0:4,21:NULL:122.492:326.675,113.385:0.0,0.0:0.0,3.79849e-06,1.0
+chr1	9384508	.	TGTGTGTGTGTG	TGTGTGTGTG,TGTGTGTGTGTGTG	.	.	END=9384519;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:53:0.99989:5,7:5-5,6-7:29,19,0,4:5,17|6,4|7,8:5,2|6,2:354.905:366.612,131.36:0.0,0.352842:1.35892e-21,1.0,9.49165e-16	0/0:26:0.628284:6,6:5-6,5-6:20,6,0,0:5,4|6,16:NULL:150.794:326.675,113.385:0.44763,0.44763:7.92581e-13,0.371769,0.62828
+chr1	9384520	.	TATATATATATATATATA	TATATATATATATATA	.	.	END=9384537;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.908251:8,8:6-10,6-10:18,21,0,0:8,15|9,3:NULL:276.123:366.612,131.36:0.754427,0.754427:0.908294,0.0918042,1.71562e-14	0/0:22:0.815459:9,9:8-9,8-9:16,6,0,0:8,3|9,13:NULL:131.98:326.675,113.385:0.425627,0.425627:3.99286e-13,0.184457,0.815606
+chr1	9392580	.	CACACACACACACACA	.	.	.	END=9392595;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:8,8:8-8,8-8:26,22,0,3:8,26:4,1|6,1|7,1:333.753:366.612,131.36:0.0,0.0:3.5e-44,1.14853e-07,1.0	0/0:48:1.0:8,8:8-8,8-8:32,12,0,3:8,32:5,2|6,1:259.698:326.675,113.385:0.0,0.0:0.0,1.69574e-09,1.0
+chr1	9394954	.	TTTCTTTTCTTTTCT	.	.	.	END=9394968;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999994:3,3:3-3,3-3:19,10,0,0:3,19:NULL:167.96:366.612,131.36:0.0,0.0:0.0,1.26792e-05,0.999987	0/0:30:0.999975:3,3:3-3,3-3:18,12,0,0:3,18:NULL:178.442:326.675,113.385:0.0,0.0:0.0,3.36197e-05,0.99997
+chr1	9397849	.	TCTCTCTCTCTC	.	.	.	END=9397860;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:6,6:6-6,6-6:38,21,0,0:6,38:NULL:345.738:366.612,131.36:0.0,0.0:0.0,6.80768e-11,1.0	0/0:40:1.0:6,6:6-6,6-6:24,15,0,0:6,24:NULL:235.651:326.675,113.385:0.0990099,0.0990099:0.0,9.29089e-07,1.0
+chr1	9400767	.	GAGGGAGGGAGG	.	.	.	END=9400778;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:33,27,0,0:3,33:NULL:381.784:366.612,131.36:0.0,0.0:0.0,1.46477e-09,1.0	0/0:38:1.00001:3,3:3-3,3-3:21,15,0,2:3,21:2,2:237.819:326.675,113.385:0.0,0.0:0.0,1.35646e-06,1.0
+chr1	9407672	.	ATATATATATATATAT	AT	.	.	END=9407687;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0268074:1,1:1-6,1-6:0,22,0,0:NULL:NULL:205.027:366.612,131.36:1.55644,1.55644:0.381771,0.483122,0.135186	0/0:19:0.986192:8,8:8-9,8-9:10,8,0,0:8,10:NULL:115.125:326.675,113.385:0.345543,0.345543:1.81266e-16,0.00695297,0.993062
+chr1	9413992	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9414011;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.996606:7,7:7-7,7-7:11,10,0,4:7,11:5,1|6,3:166.465:366.612,131.36:0.0,0.0:0.0,7.4379e-05,0.999926	0/0:36:0.999055:5,5:5-5,5-5:13,16,0,7:5,13:2,1|3,3|4,3:248.56:326.675,113.385:0.0,0.0:5.94545e-39,0.000475321,0.999529
+chr1	9418611	.	TTCTTTCTTTCT	.	.	.	END=9418622;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,19,0,2:3,22:2,2:271.278:366.612,131.36:0.0,0.0:0.0,1.01741e-06,1.0	0/0:37:1.0:3,3:3-3,3-3:26,11,0,0:3,26:NULL:199.853:326.675,113.385:0.0,0.0:0.0,9.92493e-08,1.0
+chr1	9420278	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=9420321;RU=tgtt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999993:8,8:8-8,8-8:18,22,0,9:8,18:3,1|5,3|6,1|7,4:343.572:366.612,131.36:0.0990099,0.0990099:1.0,2.31478e-06,0.0	0/0:53:1.0:11,11:11-15,11-15:29,15,0,7:11,29:3,3|5,2|9,1|10,1:313.405:326.675,113.385:1.08025,1.08025:0.0,1.55196e-08,1.0
+chr1	9422121	.	AATAAATAAATA	.	.	.	END=9422132;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999562:3,3:3-3,3-3:14,7,0,0:3,14:NULL:123.654:366.612,131.36:0.0,0.0:1.8e-44,0.000234214,0.999766	0/0:21:0.998933:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.022:326.675,113.385:0.0,0.0:2.4053e-41,0.000576164,0.999424
+chr1	9424740	.	TCTCTTCTCTTCTCT	.	.	.	END=9424754;RU=tctct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999984:3,3:3-3,3-3:18,16,0,0:3,18:NULL:218.131:366.612,131.36:0.0,0.0:0.0,2.62183e-05,0.999978	0/0:20:0.997447:3,3:3-3,3-3:12,8,0,0:3,12:NULL:121.749:326.675,113.385:0.0,0.0:3.67533e-40,0.00153279,0.998473
+chr1	9431832	.	AAACCAAAACCAAAACCA	.	.	.	END=9431849;RU=aaacca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999845:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.258:366.612,131.36:0.0,0.0:0.0,0.000104917,0.999896	0/0:25:0.999993:3,3:3-3,3-3:19,6,0,0:3,19:NULL:134.242:326.675,113.385:0.0,0.0:0.0,1.72612e-05,0.999986
+chr1	9435914	.	ACAGAGACAGAGACAGAGACAGAG	.	.	.	END=9435937;RU=acagag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999917:4,4:3-4,3-4:16,21,0,4:4,16:2,2|3,2:279.521:366.612,131.36:0.374147,0.374147:0.0,6.21351e-05,0.99994	0/0:27:0.999746:4,4:3-4,3-4:15,8,0,3:4,15:2,2|3,1:155.267:326.675,113.385:0.374147,0.374147:7e-45,0.00014349,0.999857
+chr1	9438550	.	AAATCAAATCAAATC	.	.	.	END=9438564;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999971:3,3:3-3,3-3:18,19,0,0:3,18:NULL:249.079:366.612,131.36:0.0,0.0:0.0,3.60357e-05,0.999964	0/0:35:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:208.921:326.675,113.385:0.0,0.0:0.0,4.69581e-06,0.999995
+chr1	9440244	.	CCACCACCACCACCACCA	.	.	.	END=9440261;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:19,13,0,5:6,19:4,2|5,3:240.689:366.612,131.36:0.0,0.0:0.0,4.53287e-06,0.999995	0/0:31:1.00001:6,6:6-6,6-6:22,7,0,2:6,22:5,2:161.055:326.675,113.385:0.0,0.0:0.0,8.65582e-07,1.0
+chr1	9440854	.	TTATTATTATTATTA	.	.	.	END=9440868;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997378:5,5:5-5,5-5:11,10,0,3:5,11:4,3:159.876:366.612,131.36:0.0,0.0:3.52558e-28,0.00105255,0.998952	0/0:15:0.981375:5,5:5-5,5-5:9,4,0,2:5,9:4,2:90.8043:326.675,113.385:0.0,0.0:8.55695e-23,0.00799974,0.992018
+chr1	9442366	.	TCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=9442379;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.983957:8,8:8-9,8-9:10,18,0,0:8,10:NULL:206.99:366.612,131.36:0.46122,0.46122:7.8753e-34,0.00705923,0.992956	0/0:34:0.990911:7,7:6-8,6-8:11,21,0,0:7,11:NULL:231.834:326.675,113.385:0.446534,0.446534:6.00934e-24,0.00629505,0.993721
+chr1	9443711	.	ATACATACATACATAC	.	.	.	END=9443726;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.9997:4,4:4-4,4-4:14,18,0,4:4,14:2,1|3,3:250.416:366.612,131.36:0.0,0.0:1.09036e-38,0.000189682,0.999812	0/0:15:0.993713:4,4:4-4,4-4:11,4,0,0:4,11:NULL:78.9:326.675,113.385:0.0,0.0:1.21939e-30,0.00338957,0.996618
+chr1	9444202	.	ACCCACCCACCC	.	.	.	END=9444213;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.661794:3,3:2-3,2-3:4,20,0,0:3,4:NULL:195.19:366.612,131.36:0.240494,0.240494:1.39751e-12,0.218393,0.781647	0/0:26:0.991091:3,3:3-3,3-3:10,16,0,0:3,10:NULL:189.381:326.675,113.385:0.0,0.0:1.7653e-30,0.0063046,0.993708
+chr1	9450506	.	GGGTGGGTGGGT	.	.	.	END=9450517;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999723:3,3:3-3,3-3:15,13,0,0:3,15:NULL:178.435:366.612,131.36:0.0,0.0:0.0,0.000165041,0.999835	0/0:23:0.999917:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.376:326.675,113.385:0.0,0.0:0.0,5.0317e-05,0.999949
+chr1	9452272	.	AAAACAAAACAAAAC	.	.	.	END=9452286;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999909:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.479:366.612,131.36:0.0,0.0:0.0,5.94196e-05,0.999941	0/0:37:1.0:3,3:3-3,3-3:25,9,0,3:3,25:2,3:202.435:326.675,113.385:0.0,0.0:0.0,8.19423e-08,1.0
+chr1	9459770	.	TCTCTCTCTCTC	.	.	.	END=9459781;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998603:6,6:6-6,6-6:13,12,0,3:6,13:5,3:187.993:366.612,131.36:0.0,0.0:7.18605e-30,0.000555701,0.999447	0/0:21:0.998424:6,6:6-7,6-7:13,7,0,0:6,13:NULL:113.472:326.675,113.385:0.345543,0.345543:2.92193e-30,0.000800413,0.999203
+chr1	9461244	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	END=9461298;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.998204:13,13:12-13,12-13:12,16,0,19:13,12:4,4|6,3|7,1|8,2|9,2|10,3|11,1|12,3:336.703:366.612,131.36:0.35561,0.35561:0.0,7.50168e-05,0.999926	0/0:46:0.988769:11,11:6-11,6-11:10,16,0,19:11,10:3,2|4,2|5,3|6,3|7,5|8,1|9,2|10,1:326.85:326.675,113.385:2.23815,2.23815:4.06269e-27,0.00860565,0.991413
+chr1	9462516	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT	.	.	END=9462541;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0142412:12,12:13-17,13-17:0,10,0,0:NULL:NULL:89.5365:366.612,131.36:1.95664,1.95664:0.118219,0.453785,0.428162	0/0:13:0.79068:13,13:11-14,11-14:7,3,0,0:13,7:NULL:60.1106:326.675,113.385:0.783743,0.783743:1.10101e-07,0.0955401,0.904565
+chr1	9463887	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACA	.	.	END=9463930;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:0.296089:19,22:18-19,18-24:10,14,0,9:18,4|19,6:5,1|6,1|10,1|11,1|17,3|18,1|22,1:257.221:366.612,131.36:0.35561,2.07165:5.98453e-05,0.999941,1.80856e-16	0/0:28:0.738784:22,22:21-22,21-22:5,10,0,12:22,5:4,1|5,2|8,1|9,1|11,1|13,1|16,1|17,1|21,3:208.298:326.675,113.385:0.270063,0.270063:6.73055e-07,0.0717911,0.928307
+chr1	9468830	.	GAGGGAGGGAGG	.	.	.	END=9468841;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:20,21,0,0:3,20:NULL:262.44:366.612,131.36:0.0,0.0:0.0,1.11017e-05,0.999993	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:196.84:326.675,113.385:0.0,0.0:0.0,4.90263e-07,1.0
+chr1	9470692	.	CACACACACACA	.	.	.	END=9470703;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:6,6:6-6,6-6:24,8,0,2:6,24:5,2:184.022:366.612,131.36:0.0,0.0:0.0,2.70614e-07,1.0	0/0:41:1.0:6,6:6-6,6-6:25,11,0,5:6,25:4,3|5,2:239.921:326.675,113.385:0.0,0.0:0.0,1.09519e-07,1.0
+chr1	9471535	.	GAGAGGAGAGGAGAG	.	.	.	END=9471549;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.679762:3,3:1-3,1-3:4,13,0,0:3,4:NULL:136.237:366.612,131.36:0.390054,0.390054:2.55998e-13,0.199129,0.800916	0/0:6:0.475982:3,3:3-3,3-3:3,3,0,0:3,3:NULL:40.6212:326.675,113.385:0.281439,0.281439:2.60341e-10,0.221156,0.778882
+chr1	9472682	.	ATGAATGAATGA	.	.	.	END=9472693;RU=atga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.977545:3,3:3-3,3-3:8,13,0,0:3,8:NULL:147.361:366.612,131.36:0.0,0.0:3.09987e-24,0.0139718,0.986059	0/0:22:0.997079:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.437:326.675,113.385:0.0,0.0:7.52693e-33,0.00197559,0.998033
+chr1	9472967	.	TGTGTGTGTGTGTG	.	.	.	END=9472980;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99761:7,7:7-8,7-8:12,11,0,2:7,12:5,1|6,1:161.169:366.612,131.36:0.36513,0.36513:5.2729e-25,0.00114661,0.99886	0/0:22:0.999708:7,7:7-7,7-7:15,5,0,2:7,15:6,2:120.874:326.675,113.385:0.0,0.0:2.76285e-31,0.000108582,0.999894
+chr1	9474757	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=9474784;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:14,14:14-14,14-14:30,17,0,10:13,2|14,28:8,1|10,1|11,3|12,4|13,1:368.603:366.612,131.36:0.0,0.0:1.7378e-41,3.7235e-07,1.0	0/0:50:0.999638:14,14:13-14,13-14:20,20,0,9:12,2|14,18:5,1|7,1|10,3|13,4:347.548:326.675,113.385:0.294378,0.294378:9.25131e-27,0.000345403,0.999658
+chr1	9475821	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9475866;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.306361:19,29:19-20,19-31:14,17,0,9:18,2|19,9|20,3:6,2|7,1|11,2|16,1|17,1|18,1|29,1:310.496:366.612,131.36:0.35561,4.9792:0.00254241,0.997465,1.18371e-28	0/0:32:0.415505:23,23:21-23,21-23:6,9,0,16:22,2|23,4:5,1|7,1|8,1|9,2|10,1|11,2|14,2|16,1|17,1|18,1|19,1|20,2:246.597:326.675,113.385:0.716027,0.716027:0.000398632,0.510801,0.488861
+chr1	9476189	.	GCAGGCAGGCAG	.	.	.	END=9476200;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:217.696:366.612,131.36:0.0,0.0:0.0,3.95231e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:19,13,0,2:3,19:2,2:208.939:326.675,113.385:0.0,0.0:0.0,6.78018e-06,0.999994
+chr1	9482508	.	AATTAATTAATTAATTAATT	.	.	.	END=9482527;RU=aatt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.852369:5,5:5-5,5-5:7,16,0,0:5,7:NULL:175.534:366.612,131.36:0.19802,0.19802:5.761e-20,0.119528,0.880572	0/0:18:0.990887:5,5:5-5,5-5:10,8,0,0:5,10:NULL:112.505:326.675,113.385:0.0,0.0:1.32822e-28,0.00598998,0.994023
+chr1	9482533	.	AAAGAAAGAAAG	.	.	.	END=9482544;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.996445:3,3:3-3,3-3:12,14,0,0:3,12:NULL:176.654:366.612,131.36:0.0,0.0:1.69466e-35,0.00239988,0.997608	0/0:27:0.999906:3,3:3-3,3-3:16,11,0,0:3,16:NULL:162.705:326.675,113.385:0.0,0.0:0.0,5.78138e-05,0.999942
+chr1	9491448	.	AAATAAATAAATAAAT	.	.	.	END=9491463;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.997205:4,4:4-4,4-4:12,3,0,2:4,12:2,1|3,1:90.9731:366.612,131.36:0.0,0.0:9.02464e-38,0.00126858,0.998738	0/0:11:0.987186:4,4:4-4,4-4:10,1,0,0:4,10:NULL:50.208:326.675,113.385:0.0,0.0:6.382e-32,0.00633264,0.993684
+chr1	9496534	.	GAGGGAGGGAGG	.	.	.	END=9496545;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:34,16,0,0:3,34:NULL:275.852:366.612,131.36:0.0,0.0:0.0,1.86609e-10,1.0	0/0:35:1.0:3,3:3-3,3-3:28,7,0,0:3,28:NULL:174.907:326.675,113.385:0.0,0.0:0.0,2.73175e-08,1.0
+chr1	9497089	.	ACCAACCAACCA	.	.	.	END=9497100;RU=acca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999456:3,3:3-3,3-3:16,30,0,0:3,16:NULL:331.528:366.612,131.36:0.0,0.0:0.0,0.000509167,0.999492	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:222.338:326.675,113.385:0.0,0.0:0.0,1.24897e-06,1.0
+chr1	9497489	.	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	ATTATTATTATTATTATTATTATTATTATT	.	.	END=9497533;RU=att;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.994666:10,10:9-10,9-10:12,7,0,0:10,12:NULL:118.12:366.612,131.36:0.270063,0.270063:1.0,0.0,0.0	0/0:23:0.875025:15,15:15-15,15-15:6,9,0,8:15,6:4,1|6,2|8,1|10,1|11,1|13,1|14,1:168.58:326.675,113.385:0.29703,0.29703:1.54199e-10,0.051828,0.948252
+chr1	9497958	.	TTTGTTTGTTTG	.	.	.	END=9497969;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:32,11,0,2:3,32:2,2:241.553:366.612,131.36:0.0,0.0:0.0,9.19255e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:157.936:326.675,113.385:0.0,0.0:0.0,6.28813e-08,1.0
+chr1	9502657	.	ACACACACACAC	.	.	.	END=9502668;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:6,6:6-6,6-6:23,9,0,3:6,23:4,1|5,2:197.511:366.612,131.36:0.0,0.0:0.0,3.19025e-07,1.0	0/0:24:0.999982:6,6:6-6,6-6:18,4,0,2:6,18:4,1|5,1:123.674:326.675,113.385:0.0,0.0:2.646e-42,2.0149e-05,0.99998
+chr1	9504503	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=9504522;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:23,11,0,0:4,23:NULL:194.415:366.612,131.36:0.0,0.0:0.0,9.40221e-07,1.0	0/0:22:0.999891:4,4:4-4,4-4:17,5,0,0:4,17:NULL:115.806:326.675,113.385:0.0,0.0:0.0,7.52509e-05,0.999926
+chr1	9508248	.	CAAACAAACAAA	.	.	.	END=9508259;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,10,0,3:3,22:2,2|3,1:200.333:366.612,131.36:0.0,0.0:0.0,3.35221e-07,1.0	0/0:35:0.9997:3,3:3-3,3-3:15,20,0,0:3,15:NULL:240.187:326.675,113.385:0.0,0.0:0.0,0.000252808,0.99975
+chr1	9508516	.	ATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9508554;RU=ata;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.94838:14,14:14-14,14-14:8,4,0,2:14,8:4,1|10,1:88.2184:366.612,131.36:0.0,0.0:9.66214e-16,0.0202783,0.979761	0/0:33:0.91691:13,13:13-14,13-14:8,15,0,9:13,8:3,1|4,3|5,1|7,1|8,2|10,1:246.436:326.675,113.385:0.374147,0.374147:5.2725e-12,0.0673377,0.932756
+chr1	9508833	.	CACACACACACACACACA	.	.	.	END=9508850;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.955873:9,9:8-9,8-9:9,12,0,0:9,9:NULL:146.289:366.612,131.36:0.270063,0.270063:7.22498e-16,0.0326351,0.967427	0/0:27:0.999883:9,9:9-11,9-11:17,7,0,2:9,17:5,1|8,1:149.286:326.675,113.385:0.691086,0.691086:8.54708e-30,4.60868e-05,0.999956
+chr1	9511167	.	TTATTTATTTAT	.	.	.	END=9511178;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.996662:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.398:366.612,131.36:0.0,0.0:1.32255e-40,0.00211994,0.997889	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:258.692:326.675,113.385:0.0,0.0:0.0,5.52396e-07,1.0
+chr1	9514249	.	TGGATGGATGGATGGA	.	.	.	END=9514264;RU=tgga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:4,4:4-4,4-4:21,9,0,2:4,21:3,2:178.171:366.612,131.36:0.0,0.0:0.0,2.86383e-06,1.0	0/0:30:0.999927:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:178.978:326.675,113.385:0.0,0.0:0.0,3.8318e-05,0.999963
+chr1	9516045	.	AAAGAAAGAAAG	.	.	.	END=9516056;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999963:3,3:3-3,3-3:17,12,0,0:3,17:NULL:175.375:366.612,131.36:0.0,0.0:0.0,3.04347e-05,0.999971	0/0:20:0.999451:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.773:326.675,113.385:0.0,0.0:0.0,0.000288093,0.999713
+chr1	9516633	.	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAG,GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	.	.	END=9516692;RU=gggag;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0677191:6,6:5-8,5-8:0,11,0,4:NULL:3,1|4,2|5,1:125.733:366.612,131.36:1.04988,1.04988:1.0,0.0,0.0	2/2:1:0.00037075:8,8:8-8,8-8:0,1,0,0:NULL:NULL:8.16001:326.675,113.385:0.0,0.0:0.0410663,0.409397,0.549689
+chr1	9517848	.	ATTTATTTATTT	ATTTATTT	.	.	END=9517859;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:27:0.998884:2,3:2-2,2-3:12,15,0,0:2,10|3,2:NULL:190.032:366.612,131.36:0.0,0.46122:0.00112286,0.998883,1.13057e-29	0/0:26:0.98931:3,3:3-3,3-3:11,15,0,0:3,11:NULL:186.743:326.675,113.385:0.19802,0.19802:5.67931e-35,0.00761143,0.992408
+chr1	9522426	.	TTTGTTTGTTTG	.	.	.	END=9522437;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,9,0,2:3,21:2,1|3,1:178.619:366.612,131.36:0.0,0.0:0.0,6.71013e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:216.985:326.675,113.385:0.0,0.0:0.0,1.61937e-07,1.0
+chr1	9525101	.	CACACACACACACACACA	.	.	.	END=9525118;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.990074:9,9:8-9,8-9:17,8,0,2:8,2|9,15:7,1|9,1:166.143:366.612,131.36:0.311527,0.311527:1.00911e-29,0.00990056,0.99012	0/0:28:0.998546:9,9:9-9,9-9:13,12,0,3:9,13:4,2|8,1:190.377:326.675,113.385:0.0,0.0:6.30261e-22,0.000801553,0.999202
+chr1	9525246	.	ATGAATGAATGAATGAATGAATGA	.	.	.	END=9525269;RU=atga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:27,10,0,2:6,27:3,1|5,1:211.986:366.612,131.36:0.0990099,0.0990099:0.0,4.27536e-08,1.0	0/0:34:0.999832:6,6:5-6,5-6:16,14,0,3:6,16:3,1|5,2:213.876:326.675,113.385:0.345543,0.345543:1e-45,0.000123183,0.999879
+chr1	9525501	.	AAACAAACAAACAAAC	.	.	.	END=9525516;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.99998:4,4:4-4,4-4:18,10,0,6:4,18:2,2|3,4:207.534:366.612,131.36:0.0,0.0:0.0,1.20039e-05,0.999987	0/0:32:0.999956:4,4:4-4,4-4:17,10,0,5:4,17:2,1|3,4:196.242:326.675,113.385:0.0,0.0:0.0,2.47553e-05,0.999978
+chr1	9525744	.	GAGGAGGAGGAG	.	.	.	END=9525755;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:205.735:366.612,131.36:0.0,0.0:0.0,1.90918e-06,1.0	0/0:35:0.999892:4,4:4-4,4-4:16,17,0,2:4,16:3,2:236.803:326.675,113.385:0.0,0.0:0.0,6.3783e-05,0.99994
+chr1	9526193	.	AAACAAACAAACAAAC	.	.	.	END=9526208;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999704:4,4:4-4,4-4:15,24,0,3:4,15:3,3:303.015:366.612,131.36:0.0,0.0:0.0,0.000129205,0.999872	0/0:22:0.991715:4,4:4-4,4-4:11,11,0,0:4,11:NULL:144.452:326.675,113.385:0.0,0.0:3.33123e-34,0.00610614,0.99391
+chr1	9526390	.	AAATAAATAAAT	.	.	.	END=9526401;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:222.351:366.612,131.36:0.0,0.0:0.0,3.88531e-08,1.0	0/0:24:0.999751:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.747:326.675,113.385:0.0,0.0:0.0,0.000140297,0.999864
+chr1	9529332	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC	.	.	END=9529373;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.488687:17,18:7-18,7-18:10,10,0,4:16,2|17,2|18,6:10,2|12,1|15,1:172.994:366.612,131.36:4.96592,5.25089:0.99975,0.0002516,4.76555e-21	0/0:35:0.68762:21,21:20-21,20-21:8,14,0,13:20,2|21,6:8,2|10,3|11,1|12,2|13,1|15,2|18,1|20,1:277.011:326.675,113.385:0.382696,0.382696:1.44107e-06,0.28187,0.718132
+chr1	9533361	.	AGAGAGAGAGAG	.	.	.	END=9533372;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:6,6:6-7,6-7:24,11,0,0:6,24:NULL:197.143:366.612,131.36:0.253975,0.253975:0.0,5.50644e-07,1.0	0/0:33:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:193.621:326.675,113.385:0.0,0.0:0.0,8.066e-06,0.999994
+chr1	9533849	.	AAATAAATAAAT	.	.	.	END=9533860;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:229.092:366.612,131.36:0.0,0.0:0.0,9.41042e-07,1.0	0/0:17:0.994368:3,3:3-3,3-3:11,6,0,0:3,11:NULL:102.525:326.675,113.385:0.0,0.0:1.5121e-35,0.00279059,0.997216
+chr1	9536352	.	CCCACCCACCCA	CCCA	.	.	END=9536363;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.222461:1,1:1-2,1-2:0,41,0,0:NULL:NULL:368.316:366.612,131.36:0.236383,0.236383:0.544329,0.393009,0.0628117	0/0:32:0.999949:3,3:3-3,3-3:17,15,0,0:3,17:NULL:211.421:326.675,113.385:0.0,0.0:0.0,4.53939e-05,0.999956
+chr1	9536489	.	TGGAGCTGGAGCTGGAGC	.	.	.	END=9536506;RU=tggagc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:3,3:3-3,3-3:27,33,0,2:3,27:2,2:415.135:366.612,131.36:0.0,0.0:0.0,4.20734e-08,1.0	0/0:29:1.0:3,3:3-3,3-3:23,4,0,2:3,23:2,2:141.472:326.675,113.385:0.0,0.0:0.0,3.16403e-07,1.0
+chr1	9541751	.	TATATTATATTATAT	.	.	.	END=9541765;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:175.287:366.612,131.36:0.0,0.0:0.0,9.08982e-08,1.0	0/0:18:0.999729:3,3:3-3,3-3:15,3,0,0:3,15:NULL:84.3241:326.675,113.385:0.0,0.0:1e-45,0.000132508,0.999871
+chr1	9542204	.	TATTTATTTATTTATT	.	.	.	END=9542219;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.99959:4,4:4-4,4-4:14,21,0,2:4,14:2,1|3,1:259.97:366.612,131.36:0.0,0.0:2.57224e-40,0.00025296,0.99975	0/0:30:0.999828:4,4:4-4,4-4:16,12,0,2:4,16:3,2:187.136:326.675,113.385:0.0,0.0:3e-45,0.000103024,0.999896
+chr1	9544492	.	AAACAAACAAAC	.	.	.	END=9544503;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999924:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.571:366.612,131.36:0.0,0.0:0.0,5.20927e-05,0.999949	0/0:29:0.999936:3,3:3-3,3-3:17,12,0,0:3,17:NULL:171.869:326.675,113.385:0.0,0.0:0.0,4.52417e-05,0.999956
+chr1	9544579	.	AAATAAATAAAT	AAATAAATAAATAAAT	.	.	END=9544590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.95751:4,4:4-4,4-4:8,15,0,0:4,8:NULL:169.733:366.612,131.36:0.0,0.0:1.14659e-30,0.0221433,0.9779	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.482:326.675,113.385:0.0,0.0:0.0,4.78866e-07,1.0
+chr1	9544631	.	CAAACAAACAAACAAACAAA	CAAACAAACAAA	.	.	END=9544650;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.858271:3,3:3-3,3-3:6,8,0,0:3,6:NULL:96.7295:366.612,131.36:0.0,0.0:0.957888,0.0421824,2.13894e-21	0/0:30:0.999989:5,5:5-5,5-5:17,8,0,5:5,17:3,1|4,4:180.185:326.675,113.385:0.0,0.0:4e-45,1.66117e-05,0.999986
+chr1	9550027	.	AGGCAGGCTGAGGCAGGCTGAGGCAGGCTG	.	.	.	END=9550056;RU=aggcaggctg;PERIOD=10;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999978:3,3:3-3,3-3:19,18,0,3:3,19:2,3:258.204:366.612,131.36:0.0,0.0:9.2709e-24,3.21158e-05,0.999971	0/0:22:0.991697:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.68:326.675,113.385:0.0,0.0:3.84619e-14,0.00708497,0.992933
+chr1	9551002	.	TGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGT	.	.	END=9551022;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.0:5,5:5-5,5-5:18,17,0,2:5,18:4,1|5,1:236.622:366.612,131.36:0.0,0.0:0.999995,5.00637e-06,0.0	0/0:46:1.0:7,7:7-7,7-7:30,12,0,4:7,30:3,1|4,1|5,1|6,1:257.203:326.675,113.385:0.0,0.0:0.0,4.08431e-09,1.0
+chr1	9551523	.	GAAAGAAAGAAA	.	.	.	END=9551534;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:239.44:366.612,131.36:0.0,0.0:0.0,4.80066e-06,0.999995	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.768:326.675,113.385:0.0,0.0:0.0,1.69865e-06,1.0
+chr1	9553997	.	ACAGACAGACAG	.	.	.	END=9554008;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:243.212:366.612,131.36:0.0,0.0:0.0,1.54342e-06,1.0	0/0:25:0.999424:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.558:326.675,113.385:0.0,0.0:0.0,0.000310663,0.99969
+chr1	9555100	.	CATACATACATACATA	.	.	.	END=9555115;RU=cata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:4,4:4-4,4-4:21,18,0,3:4,21:2,1|3,2:272.614:366.612,131.36:0.0,0.0:0.0,3.50491e-06,1.0	0/0:43:1.0:4,4:4-4,4-4:28,11,0,4:4,28:3,4:240.061:326.675,113.385:0.0,0.0:0.0,7.57256e-09,1.0
+chr1	9557814	.	AGGCAGGCAGGC	.	.	.	END=9557825;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:288.198:366.612,131.36:0.0,0.0:0.0,1.93264e-07,1.0	0/0:49:1.0:3,3:3-3,3-3:28,19,0,2:3,28:2,2:303.728:326.675,113.385:0.0,0.0:0.0,2.70369e-08,1.0
+chr1	9559035	.	TTTATTTATTTA	.	.	.	END=9559046;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:19,18,0,0:3,19:NULL:237.608:366.612,131.36:0.0,0.0:0.0,9.02066e-06,0.999994	0/0:29:0.999997:3,3:2-3,2-3:18,8,0,2:3,18:2,2:159.677:326.675,113.385:0.253975,0.253975:0.0,9.92915e-06,0.999993
+chr1	9559216	.	CTATCTATCTAT	.	.	.	END=9559227;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998311:3,3:3-3,3-3:12,13,0,0:3,12:NULL:166.195:366.612,131.36:0.0,0.0:5.86568e-39,0.00103494,0.998968	0/0:20:0.99055:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.843:326.675,113.385:0.0,0.0:1.5807e-32,0.00583339,0.994181
+chr1	9559239	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=9559262;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998634:4,4:4-4,4-4:12,9,0,4:4,12:3,4:160.987:366.612,131.36:0.0,0.0:8.31654e-36,0.000721811,0.99928	0/0:24:0.975961:4,4:4-4,4-4:9,12,0,3:4,9:2,2|3,1:166.59:326.675,113.385:0.0,0.0:1.77814e-26,0.0163539,0.983681
+chr1	9561161	.	AAAGAAAGAAAG	.	.	.	END=9561172;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:251.128:366.612,131.36:0.0,0.0:0.0,3.12008e-06,1.0	0/0:30:0.999957:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.958:326.675,113.385:0.0,0.0:0.0,3.4985e-05,0.999964
+chr1	9567718	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9567759;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.368352:22,30:22-22,22-31:6,12,0,12:22,6:5,1|9,3|11,1|12,1|15,1|17,1|19,1|20,2|30,1:247.171:366.612,131.36:0.0,4.05102:7.66898e-17,7.24313e-08,1.0	0/0:54:0.998695:21,21:18-21,18-21:16,17,0,18:21,16:4,1|5,1|7,4|8,2|9,2|10,1|11,3|12,1|13,1|16,1|19,1:371.306:326.675,113.385:0.712046,0.712046:2.3557e-18,0.000297949,0.999705
+chr1	9569212	.	GTGGTGGTGGTG	.	.	.	END=9569223;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.997553:4,4:4-4,4-4:12,17,0,2:4,12:3,2:224.309:366.612,131.36:0.0,0.0:7.40471e-33,0.00122997,0.998777	0/0:30:0.991951:4,4:4-4,4-4:11,19,0,0:4,11:NULL:216.225:326.675,113.385:0.0,0.0:2.08963e-30,0.00592683,0.99409
+chr1	9571015	.	AAAGGAAAGGAAAGG	.	.	.	END=9571029;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.984032:3,3:3-3,3-3:10,27,0,0:3,10:NULL:289.309:366.612,131.36:0.0,0.0:5.75521e-33,0.0138028,0.986229	0/0:35:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.53:326.675,113.385:0.0,0.0:0.0,2.13318e-05,0.999979
+chr1	9571032	.	AAAGGAAAGGAAAGG	.	.	.	END=9571046;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999745:3,3:3-3,3-3:15,22,0,2:3,15:2,2:276.457:366.612,131.36:0.0,0.0:0.0,0.000159529,0.999842	0/0:36:0.999955:3,3:3-3,3-3:17,16,0,3:3,17:2,3:239.298:326.675,113.385:0.0,0.0:0.0,3.66339e-05,0.999964
+chr1	9571264	.	AGATTAGATTAGATTAGATT	.	.	.	END=9571283;RU=agatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999969:4,4:4-4,4-4:19,17,0,0:4,19:NULL:235.226:366.612,131.36:0.0,0.0:0.0,4.0984e-05,0.999963	0/0:40:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:246.326:326.675,113.385:0.0,0.0:0.0,1.61577e-06,1.0
+chr1	9571292	.	CATACATACATA	.	.	.	END=9571303;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999992:3,3:3-3,3-3:19,17,0,0:3,19:NULL:234.857:366.612,131.36:0.0,0.0:0.0,1.7738e-05,0.999986	0/0:30:0.999841:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.408:326.675,113.385:0.0,0.0:4.61e-43,0.000103159,0.999896
+chr1	9571354	.	GATTGATTGATT	.	.	.	END=9571365;RU=gatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.995849:3,3:3-3,3-3:11,15,0,2:3,11:2,2:198.858:366.612,131.36:0.0,0.0:5.99504e-37,0.00180972,0.998194	0/0:32:0.999991:3,3:3-3,3-3:18,12,0,2:3,18:2,2:191.128:326.675,113.385:0.0,0.0:0.0,1.34985e-05,0.999987
+chr1	9575481	.	TGGTGGTGGTGG	.	.	.	END=9575492;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:29,21,0,0:4,29:NULL:308.213:366.612,131.36:0.0,0.0:0.0,2.5531e-08,1.0	0/0:51:1.0:4,4:4-4,4-4:28,23,0,0:4,28:NULL:322.028:326.675,113.385:0.0,0.0:0.0,2.93502e-08,1.0
+chr1	9579567	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9579598;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.286408:16,21:16-16,16-24:18,13,0,13:15,3|16,15:6,1|10,1|11,3|13,3|14,3|15,1|21,1:314.996:366.612,131.36:0.0,3.20612:3.07634e-19,3.561e-05,0.999964	0/0:33:0.865572:16,16:15-16,15-16:18,7,0,8:15,5|16,13:7,2|9,1|11,1|13,2|15,1|16,1:210.355:326.675,113.385:0.442564,0.442564:1.78213e-20,0.13442,0.865673
+chr1	9579965	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9579994;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.881122:15,15:13-17,13-17:6,20,0,13:15,6:4,1|7,2|9,1|10,1|11,3|12,1|13,1|14,2|15,1:306.867:366.612,131.36:1.01087,1.01087:1.33388e-15,0.0251713,0.974879	0/0:25:0.982053:15,15:14-15,14-15:15,3,0,7:14,2|15,13:6,1|10,2|11,1|13,2|14,1:151.138:326.675,113.385:0.236383,0.236383:1.49043e-14,0.0174023,0.982635
+chr1	9579994	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=9580031;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:29:0.999525:17,19:16-17,16-19:13,10,0,4:16,3|17,6|19,4:5,3|10,1:195.896:366.612,131.36:0.21692,0.801063:4.20143e-06,0.999996,2.77594e-06	0/0:22:0.999096:19,19:19-19,19-19:15,2,0,5:19,15:15,1|16,1|17,2|18,1:125.664:326.675,113.385:0.0,0.0:2.3307e-29,0.000121848,0.99988
+chr1	9582597	.	CCTCCTCCTCCT	.	.	.	END=9582608;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.882089:4,4:4-4,4-4:7,21,0,0:4,7:NULL:219.266:366.612,131.36:0.29703,0.29703:6.7549e-21,0.0953619,0.904739	0/0:31:0.999283:4,4:4-4,4-4:13,16,0,2:4,13:3,2:218.782:326.675,113.385:0.0,0.0:9.46324e-39,0.00046551,0.999537
+chr1	9583195	.	AAATAAATAAATAAAT	.	.	.	END=9583210;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999814:4,4:4-4,4-4:15,13,0,5:4,15:2,1|3,4:206.943:366.612,131.36:0.0,0.0:0.0,8.99761e-05,0.999911	0/0:27:0.999477:4,4:3-5,3-5:14,7,0,4:4,14:3,4:143.282:326.675,113.385:0.633818,0.633818:4.2e-44,0.000160403,0.999842
+chr1	9583659	.	AACCAACCAACC	.	.	.	END=9583670;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.997728:3,3:3-3,3-3:12,15,0,0:3,12:NULL:186.758:366.612,131.36:0.0,0.0:9.2434e-41,0.00143367,0.998572	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:176.01:326.675,113.385:0.0,0.0:0.0,1.07304e-06,1.0
+chr1	9585234	.	AGAGAGAGAGAG	.	.	.	END=9585245;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:6,6:6-6,6-6:35,15,0,2:6,35:4,1|5,1:293.376:366.612,131.36:0.0,0.0:0.0,1.1327e-10,1.0	0/0:31:0.999978:6,6:6-7,6-7:18,12,0,0:6,18:NULL:181.935:326.675,113.385:0.236383,0.236383:4.664e-42,3.27745e-05,0.99997
+chr1	9587125	.	TAAATAAATAAA	.	.	.	END=9587136;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999965:3,3:3-3,3-3:18,22,0,0:3,18:NULL:276.885:366.612,131.36:0.0,0.0:0.0,2.96693e-05,0.999971	0/0:36:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:204.769:326.675,113.385:0.0,0.0:0.0,4.47188e-07,1.0
+chr1	9588885	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9588932;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:33:0.276794:24,32:24-24,24-32:7,10,0,16:24,7:4,1|6,1|7,2|8,1|9,2|16,2|20,3|21,3|29,1:255.89:366.612,131.36:0.0,3.61865:4.9677e-15,1.70444e-07,1.0	0/0:36:0.776549:24,24:23-25,23-25:9,10,0,16:23,2|24,7:8,2|11,1|12,2|13,2|14,3|15,3|16,1|18,1|21,1:266.77:326.675,113.385:0.532817,0.532817:2.4315e-08,0.173489,0.826583
+chr1	9591730	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9591759;RU=tc;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:6:0.021554:14,14:12-14,12-14:0,2,0,2:NULL:10,1|12,1:34.2186:366.612,131.36:0.947603,0.947603:0.348761,0.49392,0.157365	1/1:8:0.025942:12,12:12-15,12-15:0,5,0,2:NULL:6,1|8,1:58.7703:326.675,113.385:1.46059,1.46059:0.206663,0.496322,0.297103
+chr1	9591759	.	CACACACACACACACA	.	.	.	END=9591774;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.847064:8,8:8-13,8-13:7,2,0,0:8,7:NULL:47.2816:366.612,131.36:2.19962,2.19962:7.07238e-10,0.0476111,0.952465	0/0:12:0.930569:8,8:7-8,7-8:8,3,0,0:8,8:NULL:59.1515:326.675,113.385:0.35561,0.35561:3.91321e-11,0.0389658,0.961101
+chr1	9591774	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=9591823;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.0191554:25,25:25-30,25-30:0,2,0,4:NULL:7,1|10,1|11,1|16,1:50.299:366.612,131.36:0.949876,0.949876:0.0,0.0,1.0	0/0:10:0.178814:25,25:22-25,22-25:2,3,0,4:25,2:5,1|10,1|12,1|17,1:67.505:326.675,113.385:0.707349,0.707349:0.00626058,0.457123,0.53674
+chr1	9600354	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9600391;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.859315:19,19:19-20,19-20:15,12,0,11:18,2|19,11|20,2:8,1|9,1|12,1|13,1|14,3|16,2|17,1|18,1:276.718:366.612,131.36:0.436093,0.436093:2.62061e-13,0.00978464,0.990238	0/1:32:0.849525:19,20:18-19,18-20:13,6,0,12:18,2|19,8|20,3:4,2|6,2|7,1|13,1|14,2|15,1|16,2|18,1:220.619:326.675,113.385:0.169767,0.620058:1.20253e-11,0.00373575,0.996277
+chr1	9600392	.	AGAGAGAGAGAGAGAGAG	.	.	.	END=9600409;RU=ag;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999913:9,9:9-9,9-9:17,11,0,2:9,17:6,1|8,1:188.881:366.612,131.36:0.0,0.0:1.12396e-34,5.29395e-05,0.999949	0/0:32:0.999832:9,9:8-9,8-9:23,7,0,2:8,2|9,21:6,1|9,1:179.499:326.675,113.385:0.195027,0.195027:0.0,0.000174119,0.999827
+chr1	9601375	.	AAGAAAGAAAGAAAGAAAGA	AAGAAAGAAAGAAAGAAAGAAAGA	.	.	END=9601394;RU=aaga;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.999322:6,6:6-6,6-6:14,10,0,4:6,14:2,1|4,1|5,2:177.803:366.612,131.36:0.0,0.0:0.0,6.95015e-05,0.999933	0/0:25:0.999919:5,5:5-5,5-5:17,6,0,2:5,17:2,1|4,1:142.303:326.675,113.385:0.0,0.0:1.65e-43,3.54743e-05,0.999964
+chr1	9606362	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9606389;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.936713:13,13:12-13,12-13:15,21,0,8:12,3|13,12:6,1|8,2|10,1|11,2|12,1|13,1:322.203:366.612,131.36:0.390807,0.390807:0.99962,0.000382853,3.60786e-14	0/0:54:0.999707:14,14:14-14,14-14:27,15,0,11:13,4|14,23:6,1|8,1|9,1|11,1|12,3|13,4:351.894:326.675,113.385:0.139319,0.139319:1.02861e-27,0.000300045,0.999704
+chr1	9608925	.	AAAACAAAACAAAACAAAAC	.	.	.	END=9608944;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998729:4,4:4-4,4-4:12,9,0,7:4,12:2,1|3,6:179.669:366.612,131.36:0.0,0.0:8.2591e-41,0.000420259,0.999583	0/0:22:0.999873:4,4:4-4,4-4:16,3,0,3:4,16:2,1|3,2:111.98:326.675,113.385:0.0,0.0:0.0,4.67673e-05,0.999956
+chr1	9611150	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9611195;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.797661:23,23:22-23,22-23:7,22,0,15:23,7:4,1|7,1|9,2|10,1|11,1|16,2|17,2|18,1|19,1|20,1|22,2:357.74:366.612,131.36:0.422855,0.422855:1.38107e-07,0.116839,0.883262	0/0:40:0.994831:23,23:23-24,23-24:13,10,0,15:23,13:4,1|8,1|9,1|10,1|13,1|14,1|16,2|18,2|20,4|22,1:271.859:326.675,113.385:0.344691,0.344691:1.28818e-14,0.00110153,0.9989
+chr1	9612365	.	AAACAAACAAAC	.	.	.	END=9612376;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:33,20,0,0:3,33:NULL:315.123:366.612,131.36:0.0,0.0:0.0,6.36956e-10,1.0	0/0:41:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:257.034:326.675,113.385:0.0,0.0:0.0,1.22239e-06,1.0
+chr1	9615067	.	AAGGAAAGGAAAGGA	.	.	.	END=9615081;RU=aagga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.99992:3,3:3-3,3-3:17,3,0,0:3,17:NULL:97.9314:366.612,131.36:0.0,0.0:0.0,4.50181e-05,0.999956	0/0:20:0.994808:3,3:3-3,3-3:11,9,0,0:3,11:NULL:125.05:326.675,113.385:0.0,0.0:8.87133e-32,0.0033707,0.99664
+chr1	9615435	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9615462;RU=tg;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.691524:19,20:18-20,20-20:10,17,0,14:18,2|19,2|20,6:5,1|6,1|8,1|9,1|10,3|12,2|13,1|14,1|16,1|19,2:319.502:366.612,131.36:0.800696,0.19802:0.0,0.0,1.0	0/0:43:0.988039:14,14:13-14,13-14:17,8,0,16:13,3|14,14:5,2|6,4|7,2|8,1|9,2|10,1|11,2|12,2:282.1:326.675,113.385:0.284901,0.284901:8.18095e-17,0.0116994,0.988324
+chr1	9615830	.	ACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=9615845;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.995308:16,16:16-16,16-16:12,20,0,4:16,12:5,1|6,1|12,1|14,1:265.114:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:41:1.0:8,8:8-8,8-8:25,14,0,0:8,25:NULL:232.466:326.675,113.385:0.0990099,0.0990099:2.2519e-41,6.3841e-07,1.0
+chr1	9618148	.	GTTTTGTGTTTTGTGTTTTGT	.	.	.	END=9618168;RU=gttttgt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999203:3,3:3-3,3-3:14,10,0,0:3,14:NULL:143.662:366.612,131.36:0.0,0.0:3e-44,0.000537251,0.999468	0/0:32:0.999542:3,3:3-3,3-3:15,17,0,0:3,15:NULL:215.623:326.675,113.385:0.0,0.0:0.0,0.000414123,0.99959
+chr1	9618314	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9618343;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.977343:8,17:8-17,17-17:7,13,0,3:8,2|17,5:6,1|8,1|15,1:183.5:366.612,131.36:1.70101,0.0990099:1.20571e-18,1.0,2.71908e-08	0/0:28:0.398018:15,15:6-16,6-16:7,9,0,9:14,2|15,5:4,3|5,2|6,1|7,1|12,2:195.299:326.675,113.385:4.2295,4.2295:1.62833e-05,0.564795,0.435288
+chr1	9622730	.	CCATCCATCCAT	.	.	.	END=9622741;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:19,21,0,0:3,19:NULL:267.1:366.612,131.36:0.0,0.0:0.0,8.51368e-06,0.999994	0/0:39:0.449397:3,3:2-3,2-3:20,17,0,2:2,2|3,18:2,2:263.617:326.675,113.385:0.484441,0.484441:0.0,0.550717,0.449392
+chr1	9623134	.	AAACAAACAAAC	.	.	.	END=9623145;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:27,22,0,0:3,27:NULL:308.672:366.612,131.36:0.0,0.0:0.0,3.99432e-08,1.0	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:247.555:326.675,113.385:0.0,0.0:0.0,1.54894e-07,1.0
+chr1	9626974	.	TGTGTGTGTGTG	.	.	.	END=9626985;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999554:6,6:6-6,6-6:15,12,0,0:6,15:NULL:165.631:366.612,131.36:0.0,0.0:8.9785e-38,0.000244724,0.999758	0/0:22:0.997736:6,6:6-6,6-6:12,8,0,2:6,12:4,2:138.635:326.675,113.385:0.0,0.0:2.33487e-30,0.00106104,0.998944
+chr1	9629064	.	ACACACACACACAC	.	.	.	END=9629077;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999739:7,7:7-7,7-7:15,27,0,0:7,15:NULL:303.9:366.612,131.36:0.0,0.0:1.9304e-36,0.000198213,0.999804	0/0:39:1.00001:7,7:7-7,7-7:22,17,0,0:7,22:NULL:239.609:326.675,113.385:0.0,0.0:0.0,2.05518e-06,1.0
+chr1	9630961	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9630988;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0278896:21,21:21-25,21-25:0,7,0,2:NULL:10,1|17,1:77.7278:366.612,131.36:0.885682,0.885682:0.0,0.0,1.0	0/0:20:0.911054:14,14:12-15,12-15:8,7,0,2:14,8:8,1|13,1:116.934:326.675,113.385:0.670203,0.670203:4.68467e-11,0.036892,0.963175
+chr1	9632449	.	TATTTATTTATT	.	.	.	END=9632460;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99891:3,3:3-3,3-3:13,18,0,0:3,13:NULL:219.01:366.612,131.36:0.0,0.0:5.5e-44,0.000874406,0.999127	0/0:23:0.999721:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.398:326.675,113.385:0.0,0.0:0.0,0.000167424,0.999834
+chr1	9638514	.	ACATACATACAT	.	.	.	END=9638525;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:24,17,0,0:3,24:NULL:253.993:366.612,131.36:0.0,0.0:0.0,3.71575e-07,1.0	0/0:44:1.0:3,3:3-3,3-3:27,13,0,4:3,27:2,4:249.201:326.675,113.385:0.0,0.0:0.0,1.83583e-08,1.0
+chr1	9640123	.	TAAATAAATAAA	.	.	.	END=9640134;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:69:1.0:3,3:3-3,3-3:48,20,0,0:3,48:NULL:378.221:366.612,131.36:0.0,0.0:0.0,5.36149e-14,1.0	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:334.737:326.675,113.385:0.0,0.0:0.0,9.27498e-09,1.0
+chr1	9643772	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9643803;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:43:0.99998:17,18:17-17,18-18:21,14,0,6:16,2|17,11|18,8:6,1|10,1|11,1|14,1|16,1|18,1:283.602:366.612,131.36:0.220506,0.0990099:0.0,1.0533e-10,1.0	1/0:35:0.76529:14,16:10-16,16-16:14,11,0,8:13,2|14,2|15,2|16,8:5,1|7,1|8,1|10,1|11,1|12,1|13,1|14,1:240.834:326.675,113.385:1.4234,0.60323:8.8141e-09,0.975704,0.0243449
+chr1	9646643	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=9646702;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.255423:14,14:9-14,9-14:3,12,0,6:14,3:3,1|5,1|6,1|7,1|8,1|13,1:164.828:366.612,131.36:1.61079,1.61079:0.876379,0.123719,5.4977e-07	0/2:18:0.314643:15,17:15-15,15-20:5,7,0,6:15,5:4,1|6,1|7,1|12,1|14,1|17,1:138.479:326.675,113.385:0.0,1.42485:3.16289e-17,5.02754e-08,1.0
+chr1	9647869	.	AAAACAAAACAAAAC	.	.	.	END=9647883;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999978:3,3:3-3,3-3:19,19,0,0:3,19:NULL:252.99:366.612,131.36:0.0,0.0:0.0,3.05267e-05,0.999971	0/0:42:1.0:3,3:3-3,3-3:29,13,0,0:3,29:NULL:236.008:326.675,113.385:0.0,0.0:0.0,1.02047e-08,1.0
+chr1	9648036	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9648079;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.521603:27,27:26-27,26-27:4,16,0,20:27,4:7,1|8,2|9,1|12,2|13,2|14,1|15,1|16,3|17,2|19,3|20,2:326.497:366.612,131.36:0.508722,0.508722:0.0,0.0,1.0	0/0:56:0.953332:22,22:21-22,21-22:17,20,0,19:21,5|22,12:5,3|6,1|9,3|10,1|13,1|14,1|15,3|16,1|17,1|18,1|19,1|21,1|22,1:429.358:326.675,113.385:0.298675,0.298675:1.24157e-18,0.0456814,0.954391
+chr1	9648525	.	AACAACAACAACAAC	.	.	.	END=9648539;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:5,5:5-5,5-5:25,18,0,3:5,25:4,3:283.272:366.612,131.36:0.139319,0.139319:0.0,1.49358e-07,1.0	0/0:31:0.999979:5,5:5-5,5-5:18,11,0,2:5,18:4,2:186.423:326.675,113.385:0.0,0.0:0.0,1.53856e-05,0.999986
+chr1	9649233	.	AGCAGCAGCAGCAGCAGC	.	.	.	END=9649250;RU=agc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:210.823:366.612,131.36:0.0,0.0:0.0,9.54899e-09,1.0	0/0:33:1.0:6,6:6-6,6-6:24,5,0,4:6,24:5,4:171.0:326.675,113.385:0.0,0.0:0.0,1.31746e-07,1.0
+chr1	9649872	.	AGACAGACAGAC	.	.	.	END=9649883;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999951:3,3:3-3,3-3:17,15,0,0:3,17:NULL:206.542:366.612,131.36:0.0,0.0:0.0,3.27145e-05,0.999971	0/0:40:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:246.077:326.675,113.385:0.0,0.0:0.0,1.99257e-06,1.0
+chr1	9650822	.	AGGCAGGCAGGC	.	.	.	END=9650833;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:252.446:366.612,131.36:0.0,0.0:0.0,6.37642e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:241.716:326.675,113.385:0.0,0.0:0.0,2.43994e-08,1.0
+chr1	9653697	.	AATTAATTAATT	.	.	.	END=9653708;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:163.635:366.612,131.36:0.0,0.0:0.0,5.9558e-06,0.999995	0/0:35:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:210.987:326.675,113.385:0.0,0.0:0.0,1.87657e-06,1.0
+chr1	9654181	.	ACACACACACACACAC	.	.	.	END=9654196;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:8,8:6-8,6-8:23,15,0,2:8,23:5,1|6,1:243.973:366.612,131.36:0.451337,0.451337:2.0842e-41,1.49445e-06,1.0	0/0:39:0.998193:8,8:8-9,8-9:29,6,0,4:8,26|9,3:5,2|6,1|7,1:220.67:326.675,113.385:0.345543,0.345543:0.0,1.40534e-08,1.0
+chr1	9654418	.	TGTTTGTTTGTT	.	.	.	END=9654429;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:27,24,0,0:3,27:NULL:331.579:366.612,131.36:0.0,0.0:0.0,9.52743e-08,1.0	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:246.432:326.675,113.385:0.0,0.0:0.0,3.09154e-07,1.0
+chr1	9657317	.	TAGGTAGGTAGGTAGG	.	.	.	END=9657332;RU=tagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999952:4,4:4-4,4-4:18,13,0,0:4,18:NULL:197.062:366.612,131.36:0.0,0.0:0.0,5.66923e-05,0.999947	0/0:29:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:158.96:326.675,113.385:0.0,0.0:0.0,3.75096e-06,1.0
+chr1	9657503	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=9657520;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999909:9,9:9-10,9-10:17,11,0,3:9,17:6,1|8,2:198.971:366.612,131.36:0.169767,0.169767:6.39357e-30,4.71416e-05,0.999955	0/0:32:0.9955:9,9:8-10,8-10:22,5,0,4:8,2|9,18|10,2:5,2|8,2:180.788:326.675,113.385:0.487064,0.487064:2.29285e-31,0.000320013,0.999682
+chr1	9657524	.	GACAGACAGACA	.	.	.	END=9657535;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-4,3-4:21,10,0,2:3,21:2,2:193.092:366.612,131.36:0.334882,0.334882:0.0,1.46363e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:23,5,0,2:3,23:2,2:150.605:326.675,113.385:0.0,0.0:0.0,3.26794e-07,1.0
+chr1	9658926	.	CCCACCCCCACCCCCACC	.	.	.	END=9658943;RU=cccacc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.902147:3,3:3-3,3-3:7,25,0,0:3,7:NULL:252.469:366.612,131.36:0.278639,0.278639:4.55821e-21,0.0822109,0.917883	0/0:27:0.951281:3,3:3-3,3-3:8,19,0,0:3,8:NULL:214.396:326.675,113.385:0.19802,0.19802:5.9391e-24,0.0431802,0.95689
+chr1	9659382	.	GGTTGGTTGGTTGGTT	.	.	.	END=9659397;RU=ggtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:25,21,0,5:4,25:2,1|3,4:322.734:366.612,131.36:0.0,0.0:0.0,1.41532e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:235.149:326.675,113.385:0.0,0.0:0.0,8.22004e-08,1.0
+chr1	9660032	.	AATTAATTAATT	AATTAATT	.	.	END=9660043;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:17:1.0:2,3:2-3,1-3:4,13,0,0:2,2|3,2:NULL:139.697:366.612,131.36:0.309,0.439006:2.25175e-06,1.0,1.67431e-06	0/0:12:0.962574:3,3:3-3,3-3:8,4,0,0:3,8:NULL:69.585:326.675,113.385:0.0,0.0:3.78813e-27,0.0192602,0.980778
+chr1	9661858	.	TATTTATTTATT	.	.	.	END=9661869;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:223.698:366.612,131.36:0.0,0.0:0.0,2.98853e-06,1.0	0/0:33:0.999909:3,3:3-3,3-3:16,13,0,4:3,16:2,4:212.817:326.675,113.385:0.0,0.0:0.0,5.11926e-05,0.999949
+chr1	9663095	.	CTTCTTCTTCTTCTT	.	.	.	END=9663109;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:4-5,4-5:20,8,0,3:5,20:3,1|4,2:176.232:366.612,131.36:0.169767,0.169767:0.0,3.18149e-06,1.0	0/0:37:1.00001:5,5:5-5,5-5:21,16,0,0:5,21:NULL:225.4:326.675,113.385:0.0,0.0:0.0,3.45165e-06,1.0
+chr1	9667084	.	GTGGGTGGGTGG	.	.	.	END=9667095;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:21,18,0,2:3,21:2,2:262.453:366.612,131.36:0.0,0.0:0.0,1.76325e-06,1.0	0/0:64:1.0:3,3:3-3,3-3:45,16,0,3:3,45:2,3:346.008:326.675,113.385:0.0,0.0:0.0,9.71045e-14,1.0
+chr1	9670565	.	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	.	.	END=9670612;RU=agagac;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.993949:9,9:9-9,9-9:10,23,0,11:9,10:3,1|4,2|5,2|6,2|7,2|8,2:338.596:366.612,131.36:0.0,0.0:0.0,0.00211497,0.99789	0/0:47:0.999883:8,8:8-8,8-8:16,20,0,11:8,16:2,1|3,2|4,4|5,1|7,3:323.809:326.675,113.385:0.0,0.0:1e-45,8.4119e-05,0.999918
+chr1	9671049	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9671068;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:21,10,0,8:4,21:2,2|3,6:229.649:366.612,131.36:0.0,0.0:0.0,1.28719e-06,1.0	0/0:28:0.999895:4,4:4-4,4-4:16,8,0,4:4,16:3,4:168.625:326.675,113.385:0.0,0.0:0.0,5.65325e-05,0.999947
+chr1	9677855	.	AATTAATTAATT	.	.	.	END=9677866;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.980491:3,3:3-3,3-3:9,13,0,0:3,9:NULL:154.314:366.612,131.36:0.0,0.0:7.7152e-31,0.0108427,0.98918	0/0:24:0.999993:3,3:3-3,3-3:19,5,0,0:3,19:NULL:121.778:326.675,113.385:0.0,0.0:0.0,1.26746e-05,0.999987
+chr1	9679931	.	TTAATTAATTAA	.	.	.	END=9679942;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:170.439:366.612,131.36:0.0,0.0:0.0,1.05695e-05,0.999993	0/0:23:0.999972:3,3:3-3,3-3:18,5,0,0:3,18:NULL:119.233:326.675,113.385:0.0,0.0:0.0,2.05989e-05,0.999979
+chr1	9680037	.	AAATAAATAAAT	.	.	.	END=9680048;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:161.662:366.612,131.36:0.0,0.0:0.0,2.71179e-06,1.0	0/0:15:0.920147:3,3:3-3,3-3:7,8,0,0:3,7:NULL:101.501:326.675,113.385:0.0,0.0:1.12079e-23,0.0432247,0.956847
+chr1	9682805	.	TTTGTTTTGTTTTGT	.	.	.	END=9682819;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:290.035:366.612,131.36:0.0,0.0:0.0,7.31982e-06,0.999994	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:212.141:326.675,113.385:0.0,0.0:0.0,9.4052e-07,1.0
+chr1	9683361	.	AAAACAAAACAAAAC	.	.	.	END=9683375;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:196.245:366.612,131.36:0.0,0.0:0.0,1.84855e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:256.143:326.675,113.385:0.0,0.0:0.0,5.61949e-08,1.0
+chr1	9687633	.	TCTTCTTCTTCT	.	.	.	END=9687644;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:4-4,4-4:31,21,0,2:4,31:3,2:326.845:366.612,131.36:0.0,0.0:0.0,2.87601e-09,1.0	0/0:44:1.0:4,4:4-4,4-4:20,22,0,2:4,20:3,2:285.82:326.675,113.385:0.0,0.0:0.0,6.53391e-06,0.999994
+chr1	9687930	.	CAACAACAACAACAA	.	.	.	END=9687944;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:5,5:5-5,5-5:20,15,0,2:5,20:4,2:235.364:366.612,131.36:0.0,0.0:0.0,4.26737e-06,0.999995	0/0:31:1.00001:5,5:5-5,5-5:22,7,0,2:5,22:4,2:168.444:326.675,113.385:0.0,0.0:0.0,1.00261e-06,1.0
+chr1	9688759	.	ATTATTATTATT	.	.	.	END=9688770;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999995:4,4:4-4,4-4:20,19,0,0:4,20:NULL:251.938:366.612,131.36:0.0,0.0:0.0,1.41438e-05,0.999987	0/0:33:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:181.887:326.675,113.385:0.0,0.0:0.0,1.26347e-06,1.0
+chr1	9688938	.	TTTGTTTGTTTG	.	.	.	END=9688949;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.991918:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.402:366.612,131.36:0.0,0.0:7.14483e-34,0.00501164,0.995002	0/0:34:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:193.646:326.675,113.385:0.0,0.0:0.0,1.62571e-06,1.0
+chr1	9689761	.	ACACACACACACACACACAC	.	.	.	END=9689780;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:0.999987:10,10:10-10,10-10:26,21,0,5:9,2|10,24:5,2|7,1|8,1|9,1:350.776:366.612,131.36:0.0990099,0.0990099:2.1023e-36,1.42608e-05,0.999987	0/0:57:0.999991:10,10:10-10,10-10:32,12,0,12:9,2|10,28|11,2:4,1|5,2|6,4|7,4|9,1:354.602:326.675,113.385:0.430892,0.430892:2.5e-44,2.95574e-07,1.0
+chr1	9691108	.	ATTTATTTATTT	.	.	.	END=9691119;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999878:3,3:3-3,3-3:16,10,0,0:3,16:NULL:149.003:366.612,131.36:0.0,0.0:0.0,6.04867e-05,0.999941	0/0:19:0.999853:3,3:3-3,3-3:16,3,0,0:3,16:NULL:89.7674:326.675,113.385:0.0,0.0:0.0,6.84543e-05,0.999933
+chr1	9691851	.	AGTAAGTAAGTAAGTA	.	.	.	END=9691866;RU=agta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:4,4:4-4,4-4:22,17,0,5:4,22:3,5:279.691:366.612,131.36:0.0,0.0:0.0,5.4925e-07,1.0	0/0:31:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:177.721:326.675,113.385:0.0,0.0:0.0,4.7318e-06,0.999995
+chr1	9694314	.	ATACATACATAC	.	.	.	END=9694325;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:219.473:366.612,131.36:0.0,0.0:0.0,1.13225e-06,1.0	0/0:38:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:208.619:326.675,113.385:0.0,0.0:0.0,7.87691e-08,1.0
+chr1	9695885	.	AAATAAATAAAT	.	.	.	END=9695896;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-4,3-4:20,20,0,3:3,20:2,3:284.861:366.612,131.36:0.345543,0.345543:0.0,6.69801e-06,0.999994	0/0:34:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:201.333:326.675,113.385:0.0,0.0:0.0,3.61883e-06,1.0
+chr1	9696536	.	AAATAAATAAAT	.	.	.	END=9696547;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:306.625:366.612,131.36:0.0,0.0:0.0,6.52315e-10,1.0	0/0:25:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:122.673:326.675,113.385:0.0,0.0:0.0,5.87155e-06,0.999995
+chr1	9699257	.	ACAACAACAACA	.	.	.	END=9699268;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:152.568:366.612,131.36:0.0,0.0:0.0,1.1249e-06,1.0	0/0:39:1.0:4,4:4-4,4-4:25,11,0,3:4,25:3,3:222.319:326.675,113.385:0.0,0.0:0.0,1.11363e-07,1.0
+chr1	9703468	.	AAACAAACAAAC	.	.	.	END=9703479;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999994:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.066:366.612,131.36:0.0,0.0:0.0,1.17266e-05,0.999987	0/0:19:0.996173:3,3:3-3,3-3:11,6,0,2:3,11:2,2:112.545:326.675,113.385:0.0,0.0:4.16261e-36,0.00136399,0.998641
+chr1	9703640	.	TTGTTGTTGTTG	.	.	.	END=9703651;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:234.651:366.612,131.36:0.0,0.0:0.0,1.66171e-06,1.0	0/0:25:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:125.859:326.675,113.385:0.0,0.0:0.0,9.80125e-06,0.999993
+chr1	9704060	.	TGGTTTTGGTTTTGGTTT	.	.	.	END=9704077;RU=tggttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999932:3,3:3-3,3-3:17,13,0,0:3,17:NULL:184.213:366.612,131.36:0.0,0.0:0.0,5.85795e-05,0.999941	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.201:326.675,113.385:0.0,0.0:0.0,5.56269e-06,0.999995
+chr1	9705815	.	GTTTGTTTGTTTGTTT	.	.	.	END=9705830;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.674159:4,4:2-4,2-4:5,15,0,0:4,5:NULL:158.217:366.612,131.36:0.477306,0.477306:2.98968e-17,0.236009,0.764015	0/0:26:0.999993:4,4:4-4,4-4:19,7,0,0:4,19:NULL:141.001:326.675,113.385:0.0,0.0:0.0,1.56908e-05,0.999986
+chr1	9710499	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=9710522;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.998341:4,4:4-4,4-4:12,12,0,4:4,12:3,4:185.253:366.612,131.36:0.0,0.0:0.999477,0.000525053,2.34701e-38	0/0:28:0.999938:6,6:6-6,6-6:18,7,0,3:6,18:2,2|3,1:160.473:326.675,113.385:0.0,0.0:0.0,4.24882e-05,0.999957
+chr1	9710692	.	TTTGTTTGTTTG	.	.	.	END=9710703;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99993:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.914:366.612,131.36:0.0,0.0:0.0,3.98414e-05,0.999963	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:139.644:326.675,113.385:0.0,0.0:0.0,4.75786e-06,0.999995
+chr1	9710885	.	ATTTATTTATTTATTT	.	.	.	END=9710900;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.71043:4,4:3-4,3-4:5,17,0,4:4,5:2,2|3,2:205.355:366.612,131.36:0.253975,0.253975:2.75459e-15,0.174742,0.825328	0/0:28:0.999157:4,4:4-4,4-4:13,10,0,5:4,13:3,5:177.402:326.675,113.385:0.0,0.0:4.21589e-40,0.000347666,0.999653
+chr1	9712334	.	TAAATAAATAAATAAATAAA	.	.	.	END=9712353;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999998:5,5:5-5,5-5:18,14,0,6:5,18:3,1|4,5:247.198:366.612,131.36:0.0,0.0:2.5e-44,1.03477e-05,0.999993	0/0:22:0.991102:5,5:5-5,5-5:10,10,0,2:5,10:4,2:149.796:326.675,113.385:0.0,0.0:1.02584e-24,0.00490215,0.995108
+chr1	9712678	.	TGTATGTATGTA	.	.	.	END=9712689;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:27,24,0,0:3,27:NULL:331.077:366.612,131.36:0.0,0.0:0.0,4.25356e-08,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.328:326.675,113.385:0.0,0.0:0.0,6.61577e-07,1.0
+chr1	9712838	.	GGCTGGCTGGCT	.	.	.	END=9712849;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:3,3:3-3,3-3:21,25,0,3:3,21:2,3:333.27:366.612,131.36:0.0,0.0:0.0,1.0754e-06,1.0	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:160.56:326.675,113.385:0.0,0.0:0.0,2.80029e-06,1.0
+chr1	9713883	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9713918;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.783324:29,30:29-30,29-30:5,16,0,21:29,2|30,3:4,1|5,1|6,1|8,1|9,2|10,1|12,1|13,1|14,1|15,1|16,1|18,1|19,4|24,1|25,1|27,1|28,1:338.818:366.612,131.36:0.582057,0.585081:0.0,0.0,1.0	0/0:35:0.634928:18,18:17-18,17-18:11,11,0,13:17,3|18,8:6,2|8,1|10,1|11,2|12,1|13,1|14,2|16,2|18,1:256.984:326.675,113.385:0.45695,0.45695:1.01629e-14,0.360848,0.639196
+chr1	9719437	.	TAAATAAATAAA	.	.	.	END=9719448;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:29,21,0,2:3,29:2,2:321.514:366.612,131.36:0.0,0.0:0.0,7.19871e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.708:326.675,113.385:0.0,0.0:0.0,3.85455e-07,1.0
+chr1	9725821	.	AAACAAACAAACAAACAAAC	.	.	.	END=9725840;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.98873:5,5:5-5,5-5:10,9,0,0:5,10:NULL:120.746:366.612,131.36:0.0,0.0:6.68574e-36,0.00721016,0.992806	0/0:26:0.999871:5,5:5-5,5-5:16,5,0,5:5,16:2,2|3,1|4,2:147.576:326.675,113.385:0.0,0.0:0.0,5.49581e-05,0.999948
+chr1	9725879	.	AATAAATAAATA	AATAAATAAATAAATA	.	.	END=9725890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.541156:4,4:3-4,3-4:4,12,0,0:4,4:NULL:121.68:366.612,131.36:0.326282,0.326282:8.05336e-16,0.185431,0.814632	0/0:23:0.999126:3,3:3-3,3-3:13,8,0,2:3,13:2,2:138.552:326.675,113.385:0.0,0.0:2.34e-43,0.000423082,0.999582
+chr1	9726064	.	ACAACAACAACA	.	.	.	END=9726075;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999299:4,4:4-4,4-4:14,4,0,0:4,14:NULL:90.4591:366.612,131.36:0.0,0.0:0.0,0.00034447,0.999659	0/0:27:0.999997:4,4:4-4,4-4:18,6,0,3:4,18:3,3:146.303:326.675,113.385:0.0,0.0:0.0,1.10421e-05,0.999993
+chr1	9726319	.	GAAAGAAAGAAA	.	.	.	END=9726330;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999389:3,3:3-3,3-3:14,15,0,0:3,14:NULL:187.761:366.612,131.36:0.0,0.0:0.0,0.000348747,0.999652	0/0:31:0.999991:3,3:3-3,3-3:18,11,0,2:3,18:2,2:185.272:326.675,113.385:0.0,0.0:0.0,1.32864e-05,0.999987
+chr1	9726354	.	TATTTATTTATT	.	.	.	END=9726365;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999407:3,3:3-3,3-3:14,13,0,0:3,14:NULL:170.997:366.612,131.36:0.0,0.0:8.671e-42,0.000330732,0.999673	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:204.567:326.675,113.385:0.0,0.0:0.0,1.8859e-06,1.0
+chr1	9727029	.	AAAACAAAACAAAACAAAAC	AAAAC	.	.	END=9727048;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.147142:1,1:1-3,1-3:0,29,0,0:NULL:NULL:260.807:366.612,131.36:0.611622,0.611622:0.774622,0.214201,0.0112283	0/0:45:1.0:4,4:4-4,4-4:23,17,0,5:4,23:2,1|3,4:276.386:326.675,113.385:0.0,0.0:0.0,2.68601e-07,1.0
+chr1	9728119	.	TTGTTGTTGTTG	.	.	.	END=9728130;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999633:4,4:4-4,4-4:15,17,0,0:4,15:NULL:213.604:366.612,131.36:0.0,0.0:0.0,0.000271032,0.999729	0/0:23:0.999951:4,4:4-4,4-4:18,5,0,0:4,18:NULL:116.76:326.675,113.385:0.0,0.0:0.0,3.20147e-05,0.999971
+chr1	9728313	.	ATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9728330;RU=at;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.821532:25,25:25-25,25-25:6,8,0,0:25,6:NULL:104.497:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:19:0.673641:9,9:9-10,9-10:5,13,0,0:9,5:NULL:142.839:326.675,113.385:0.603392,0.603392:1.10353e-05,0.188155,0.8119
+chr1	9729577	.	TTGTTGTTGTTG	.	.	.	END=9729588;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:4,4:4-4,4-4:24,0,0,0:4,24:NULL:93.8005:366.612,131.36:0.0,0.0:0.0,3.61953e-07,1.0	0/0:46:1.0:4,4:4-4,4-4:28,15,0,3:4,28:3,3:269.199:326.675,113.385:0.0,0.0:0.0,1.38348e-08,1.0
+chr1	9729594	.	ATTTATTTATTTATTT	.	.	.	END=9729609;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:29,0,0,0:4,29:NULL:114.501:366.612,131.36:0.0,0.0:0.0,1.14181e-08,1.0	0/0:46:1.0:4,4:3-4,3-4:27,15,0,3:4,27:3,3:267.498:326.675,113.385:0.169767,0.169767:0.0,3.26584e-08,1.0
+chr1	9730050	.	TGTGTGTGTGTGTGTG	.	.	.	END=9730065;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:73:1.0:8,8:8-8,8-8:45,20,0,6:8,45:5,2|6,2|7,1|8,1:410.914:366.612,131.36:0.0,0.0:0.0,1.52131e-13,1.0	0/0:69:1.0:8,8:8-8,8-8:45,15,0,5:8,45:5,1|6,1|7,3:360.851:326.675,113.385:0.835916,0.835916:0.0,1.68201e-13,1.0
+chr1	9730553	.	AGGAGGAGGAGG	.	.	.	END=9730564;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999248:4,4:4-4,4-4:15,23,0,0:4,15:NULL:283.987:366.612,131.36:0.0,0.0:0.0,0.000659289,0.999346	0/0:38:1.0:4,4:4-4,4-4:20,18,0,0:4,20:NULL:241.989:326.675,113.385:0.0,0.0:0.0,9.69816e-06,0.999993
+chr1	9730578	.	GAGGGAGGGAGG	.	.	.	END=9730589;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:23,18,0,3:3,23:2,3:288.801:366.612,131.36:0.0,0.0:0.0,1.09775e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:240.53:326.675,113.385:0.0,0.0:0.0,1.10364e-07,1.0
+chr1	9731162	.	AAAATAAAATAAAAT	.	.	.	END=9731176;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:24,23,0,3:3,24:2,3:324.123:366.612,131.36:0.0,0.0:0.0,4.06907e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:205.696:326.675,113.385:0.0,0.0:0.0,1.97209e-08,1.0
+chr1	9732554	.	AATAATAATAAT	.	.	.	END=9732565;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999678:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.542:366.612,131.36:0.0,0.0:0.0,0.000186926,0.999818	0/0:36:1.0:4,4:4-4,4-4:24,10,0,2:4,24:3,2:202.029:326.675,113.385:0.0,0.0:0.0,2.81655e-07,1.0
+chr1	9733417	.	ACACACACACACACAC	.	.	.	END=9733432;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.994154:8,8:7-9,7-9:18,13,0,0:7,2|8,16:NULL:194.667:366.612,131.36:0.385503,0.385503:4.85808e-28,0.00585527,0.994159	0/0:39:1.0:8,8:8-8,8-8:19,13,0,6:8,19:4,1|5,2|7,3:237.836:326.675,113.385:0.0990099,0.0990099:2.27551e-36,5.86533e-06,0.999995
+chr1	9736402	.	GGGTGGGTGGGT	.	.	.	END=9736413;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999623:3,3:3-3,3-3:15,29,0,0:3,15:NULL:326.54:366.612,131.36:0.0,0.0:4.575e-42,0.000206288,0.999796	0/0:44:0.997205:3,3:3-3,3-3:13,31,0,0:3,13:NULL:332.866:326.675,113.385:0.0,0.0:1.49104e-35,0.00244273,0.997564
+chr1	9736710	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGT	.	.	END=9736727;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:1.0:7,7:7-7,7-7:33,27,0,2:7,31|8,2:5,1|6,1:407.127:366.612,131.36:0.0,0.0:1.0,1.6412e-09,0.0	0/0:61:1.0:9,9:9-9,9-9:36,17,0,8:8,2|9,32|10,2:5,6|6,1|9,1:382.691:326.675,113.385:0.0,0.0:0.0,1.24426e-07,1.0
+chr1	9740263	.	TTTGTTTGTTTGTTTG	.	.	.	END=9740278;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999301:4,4:4-4,4-4:13,18,0,3:4,13:3,3:232.383:366.612,131.36:0.0,0.0:1.078e-42,0.000389996,0.999613	0/0:41:1.0:4,4:4-4,4-4:27,10,0,4:4,27:3,4:231.344:326.675,113.385:0.0,0.0:0.0,2.00338e-08,1.0
+chr1	9740932	.	AATAAATAAATA	.	.	.	END=9740943;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.990468:3,3:1-3,1-3:10,11,0,0:3,10:NULL:135.689:366.612,131.36:0.998774,0.998774:3.04931e-29,0.00513869,0.994874	0/0:24:0.999148:3,3:3-3,3-3:13,9,0,2:3,13:2,2:143.419:326.675,113.385:0.0,0.0:8.42605e-38,0.000372926,0.999629
+chr1	9741427	.	ATATATATATATAT	.	.	.	END=9741440;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.834358:7,7:6-7,6-7:15,10,0,0:6,2|7,13:NULL:155.991:366.612,131.36:0.419363,0.419363:2.42473e-16,0.16554,0.83453	0/0:23:0.98283:7,7:6-7,6-7:9,11,0,2:7,9:6,2:152.903:326.675,113.385:0.40582,0.40582:9.70936e-14,0.00935361,0.990665
+chr1	9742971	.	ACACACACACACACACACACACACACAC	.	.	.	END=9742998;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.260718:14,14:14-18,14-18:3,2,0,0:14,3:NULL:31.2034:366.612,131.36:1.68637,1.68637:4.67353e-05,0.219261,0.780736	0/0:16:0.673437:14,14:6-14,6-14:10,0,0,5:13,3|14,7:6,1|8,1|11,1|12,1|14,1:88.1707:326.675,113.385:3.81398,3.81398:2.73843e-15,0.316227,0.683785
+chr1	9743019	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9743048;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:7:0.268864:19,19:19-20,19-20:2,1,0,4:19,2:13,1|14,1|17,1|18,1:50.6647:366.612,131.36:0.317759,0.317759:0.0,0.0,1.0	1/0:6:0.714264:14,15:14-15,14-15:4,0,0,2:14,2|15,2:5,1|11,1:35.4905:326.675,113.385:0.492866,0.323567:0.0133686,0.802258,0.184464
+chr1	9743703	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	END=9743732;RU=tcttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.98728:8,8:6-8,6-8:11,8,0,0:8,11:NULL:122.033:366.612,131.36:0.874432,0.874432:1.207e-42,0.00771628,0.992303	0/0:31:0.999756:6,6:6-6,6-6:15,12,0,4:6,15:3,1|4,1|5,2:199.947:326.675,113.385:0.0,0.0:0.0,0.00014613,0.999857
+chr1	9743909	.	AAAACAAAACAAAAC	.	.	.	END=9743923;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999971:3,3:3-3,3-3:18,20,0,0:3,18:NULL:255.789:366.612,131.36:0.0,0.0:0.0,4.0055e-05,0.999963	0/0:45:1.0:3,3:3-3,3-3:31,14,0,0:3,31:NULL:250.64:326.675,113.385:0.0,0.0:0.0,5.20746e-09,1.0
+chr1	9748068	.	GCCGCCGCCGCC	.	.	.	END=9748079;RU=gcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,17,0,0:4,26:NULL:257.092:366.612,131.36:0.0,0.0:0.0,1.47759e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:22,19,0,0:4,22:NULL:267.859:326.675,113.385:0.0,0.0:0.0,4.34809e-06,0.999995
+chr1	9748275	.	TCCTCCTCCTCC	.	.	.	END=9748286;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:27,18,0,0:4,27:NULL:270.516:366.612,131.36:0.0,0.0:0.0,8.17244e-08,1.0	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:288.438:326.675,113.385:0.0,0.0:0.0,4.31425e-09,1.0
+chr1	9748387	.	CACTCACTCACT	.	.	.	END=9748398;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999851:3,3:3-3,3-3:16,21,0,2:3,16:2,2:268.385:366.612,131.36:0.0,0.0:0.0,0.000101391,0.999902	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:197.561:326.675,113.385:0.0,0.0:0.0,7.43655e-08,1.0
+chr1	9749147	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=9749162;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.284783:4,5:4-4,4-8:15,6,0,2:4,15:2,1|5,1:139.489:366.612,131.36:0.0,0.954612:0.0,4.00039e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:21,11,0,0:4,21:NULL:188.623:326.675,113.385:0.0,0.0:0.0,4.79595e-06,0.999995
+chr1	9749755	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG	.	.	END=9749786;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.99473:11,11:11-11,11-11:12,8,0,0:11,12:NULL:125.418:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:26:0.507991:16,16:15-17,15-17:9,6,0,10:15,2|16,7:6,1|10,2|14,2|15,5:180.248:326.675,113.385:0.606956,0.606956:3.50875e-07,0.483237,0.516843
+chr1	9750225	.	AGTAGTAGTAGT	.	.	.	END=9750236;RU=agt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:21,24,0,0:4,21:NULL:298.024:366.612,131.36:0.0,0.0:0.0,5.6266e-06,0.999995	0/0:29:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:149.83:326.675,113.385:0.0,0.0:0.0,2.38812e-06,1.0
+chr1	9752253	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9752286;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.997256:17,17:17-17,17-17:17,17,0,16:16,2|17,15:5,1|6,1|7,1|9,1|10,1|12,2|13,2|14,1|15,3|16,3:365.646:366.612,131.36:0.139319,0.139319:8.89801e-17,0.00262498,0.997382	0/1:53:0.277617:17,28:17-17,17-29:20,13,0,20:16,2|17,15|18,3:4,1|5,1|6,4|9,1|10,3|11,3|12,1|16,2|17,1|22,1|25,1|27,1:398.995:326.675,113.385:0.0,3.61678:9.044e-42,3.50049e-19,1.0
+chr1	9754367	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9754416;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:57:0.990223:27,27:27-27,27-27:13,19,0,23:27,13:4,2|5,1|6,1|8,1|11,1|12,1|13,1|16,2|17,3|18,2|19,1|20,2|21,2|23,2|25,1:420.448:366.612,131.36:0.0,0.0:3.55007e-33,0.00110758,0.998898	0/0:44:0.998768:25,25:20-25,20-25:18,8,0,15:24,2|25,16:6,1|7,1|10,1|12,1|13,1|14,1|15,2|20,2|21,2|22,1|24,2:282.635:326.675,113.385:1.19347,1.19347:5.59785e-17,0.000549827,0.999453
+chr1	9755337	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9755366;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:25:0.0259109:21,38:18-38,18-40:0,11,0,14:NULL:5,1|8,1|9,1|10,1|11,1|13,1|14,1|15,2|18,3|20,1|38,1:208.402:366.612,131.36:6.23399,8.69789:0.0,0.00387329,0.996135	0/1:40:0.28343:15,18:15-15,14-21:15,14,0,10:14,3|15,12:7,2|8,2|11,1|13,1|14,2|15,1|18,1:292.839:326.675,113.385:0.0,2.01937:2.47547e-24,2.57404e-05,0.999978
+chr1	9755657	.	TTGTTTGTTTGT	.	.	.	END=9755668;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:186.489:366.612,131.36:0.0,0.0:0.0,3.11925e-07,1.0	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.226:326.675,113.385:0.0,0.0:0.0,1.51129e-08,1.0
+chr1	9756639	.	TACATACATACA	.	.	.	END=9756650;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.966555:3,3:3-3,3-3:8,6,0,0:3,8:NULL:87.5348:366.612,131.36:0.0,0.0:9.22639e-24,0.0144593,0.985571	0/0:25:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:130.067:326.675,113.385:0.0,0.0:0.0,1.92148e-05,0.99998
+chr1	9757162	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9757199;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.627552:20,20:20-20,20-20:4,16,0,13:20,4:7,1|10,1|11,3|12,2|14,1|16,1|17,2|18,1|20,1:268.773:366.612,131.36:0.0,0.0:1.04652e-15,0.0540829,0.946001	0/0:39:0.810248:19,19:17-19,17-19:18,9,0,10:17,2|18,4|19,12:6,1|8,1|10,2|11,1|12,1|15,1|16,3:255.456:326.675,113.385:0.725682,0.725682:5.86452e-12,0.18951,0.81055
+chr1	9758381	.	GAGGGAGGGAGG	.	.	.	END=9758392;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999043:3,3:3-3,3-3:13,17,0,3:3,13:2,3:233.894:366.612,131.36:0.0,0.0:9.2e-44,0.000391643,0.999613	0/0:20:0.999413:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.155:326.675,113.385:0.0,0.0:0.0,0.000297211,0.999705
+chr1	9760350	.	TCTGTCTGTCTG	.	.	.	END=9760361;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999711:3,3:3-3,3-3:15,11,0,0:3,15:NULL:162.063:366.612,131.36:0.0,0.0:0.0,0.000177622,0.999826	0/0:21:0.992456:3,3:3-3,3-3:10,11,0,0:3,10:NULL:145.772:326.675,113.385:0.0,0.0:8.02761e-33,0.00492337,0.995091
+chr1	9762148	.	GCTTGCTTGCTTGCTT	.	.	.	END=9762163;RU=gctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997277:4,4:3-4,3-4:13,11,0,0:4,13:NULL:157.657:366.612,131.36:0.484441,0.484441:7.004e-42,0.00191796,0.998087	0/0:15:0.997053:4,4:4-4,4-4:12,3,0,0:4,12:NULL:72.1752:326.675,113.385:0.0,0.0:3.34431e-39,0.0016027,0.998405
+chr1	9762349	.	ATTTATTTATTT	ATTT	.	.	END=9762360;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:23:0.444967:1,3:1-4,3-4:2,20,0,0:3,2:NULL:212.951:366.612,131.36:1.24587,0.479355:2.66417e-05,0.665763,0.334226	0/0:14:0.86346:3,3:3-3,3-3:6,8,0,0:3,6:NULL:97.6072:326.675,113.385:0.0,0.0:2.96324e-15,0.0753266,0.92477
+chr1	9763714	.	AATAAATAAATAAATA	.	.	.	END=9763729;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999239:4,4:4-4,4-4:14,20,0,2:4,14:3,2:252.735:366.612,131.36:0.0,0.0:1.4954e-40,0.000504567,0.999499	0/0:29:0.999768:4,4:4-4,4-4:16,13,0,0:4,16:NULL:181.07:326.675,113.385:0.0,0.0:0.0,0.000168551,0.999834
+chr1	9763878	.	AAAAACAAAAACAAAAAC	.	.	.	END=9763895;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.964413:3,3:3-3,3-3:8,15,0,2:3,8:2,2:184.52:366.612,131.36:0.0,0.0:7.99829e-27,0.0215309,0.978512	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.123:326.675,113.385:0.0,0.0:0.0,7.80059e-06,0.999994
+chr1	9765363	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9765406;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:22:0.999992:22,26:22-22,22-26:13,7,0,2:22,8|26,5:7,1|18,1:148.74:366.612,131.36:0.0,0.780108:8.05933e-23,2.55888e-10,1.0	1/0:27:0.72604:21,22:21-22,22-22:7,9,0,11:21,2|22,5:6,1|9,1|10,1|11,2|12,2|13,1|17,1|18,1|20,1:202.097:326.675,113.385:0.499387,0.0990099:2.71366e-05,0.744188,0.255792
+chr1	9765415	.	GCGCGCGCGCGCGC	.	.	.	END=9765428;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999862:7,7:6-7,6-7:17,8,0,0:7,17:NULL:142.377:366.612,131.36:0.169767,0.169767:8.93e-43,8.60959e-05,0.999917	0/0:23:0.997911:7,7:7-7,7-7:13,10,0,0:7,13:NULL:140.463:326.675,113.385:0.0,0.0:7.27135e-33,0.000986207,0.99902
+chr1	9770170	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9770189;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999402:10,10:10-11,10-11:14,16,0,5:10,14:6,1|7,1|8,2|9,1:246.55:366.612,131.36:0.322657,0.322657:7.76315e-25,0.000246239,0.999757	0/1:32:0.291365:10,14:10-10,10-14:16,13,0,2:10,16:7,1|13,1:216.461:326.675,113.385:0.0,1.55007:3.90969e-31,1.72145e-07,1.0
+chr1	9770190	.	GCGCGCGCGCGCGCGCGCGC	.	.	.	END=9770209;RU=gc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997553:10,10:10-10,10-10:12,13,0,0:10,12:NULL:169.02:366.612,131.36:0.0,0.0:3.79124e-31,0.00132692,0.998678	0/0:26:0.997978:10,10:10-10,10-10:13,13,0,0:10,13:NULL:176.391:326.675,113.385:0.0,0.0:1.62128e-33,0.00144893,0.998557
+chr1	9770676	.	GCCCAGCCCAGCCCA	.	.	.	END=9770690;RU=gccca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999697:3,3:3-3,3-3:15,18,0,0:3,15:NULL:217.894:366.612,131.36:0.0,0.0:0.0,0.000236184,0.999766	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:174.723:326.675,113.385:0.0,0.0:0.0,2.41586e-07,1.0
+chr1	9771804	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9771841;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:60:0.999998:13,13:13-13,13-13:29,19,0,10:12,3|13,26:5,2|6,2|7,2|8,1|12,3:381.097:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:58:0.979498:19,19:18-19,18-19:24,18,0,16:17,2|18,4|19,18:5,1|6,4|9,1|10,1|11,1|12,2|13,2|16,1|17,2|18,1:414.085:326.675,113.385:0.253975,0.253975:4.98745e-19,0.0205358,0.979505
+chr1	9771917	.	CCACCACCACCACCACCACCA	.	.	.	END=9771937;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:7,7:7-7,7-7:26,15,0,3:7,26:5,2|6,1:261.157:366.612,131.36:0.0,0.0:0.0,7.95077e-08,1.0	0/0:45:1.0:7,7:7-7,7-7:24,16,0,5:7,24:3,1|5,1|6,3:286.844:326.675,113.385:0.0,0.0:0.0,2.22096e-07,1.0
+chr1	9772803	.	TATTTATTTATT	.	.	.	END=9772814;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.9895:3,3:3-3,3-3:10,10,0,0:3,10:NULL:126.035:366.612,131.36:0.0,0.0:6.07052e-30,0.00541532,0.994596	0/0:20:0.999978:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.7298:326.675,113.385:0.0,0.0:0.0,1.57048e-05,0.999986
+chr1	9773234	.	CACTCACTCACTCACTCACTCACT	.	.	.	END=9773257;RU=cact;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:6,6:6-6,6-6:21,14,0,3:6,21:2,1|3,2:237.891:366.612,131.36:0.0,0.0:0.0,7.5556e-06,0.999994	0/0:38:0.999985:6,6:6-6,6-6:18,14,0,6:6,18:3,3|4,3:238.929:326.675,113.385:0.0,0.0:0.0,2.30818e-05,0.999979
+chr1	9773465	.	AGGGAGGGAGGG	.	.	.	END=9773476;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.990242:3,3:3-3,3-3:10,20,0,2:3,10:2,2:240.93:366.612,131.36:0.0,0.0:1.05612e-25,0.00535308,0.994662	0/0:27:0.995156:3,3:3-3,3-3:11,16,0,0:3,11:NULL:188.95:326.675,113.385:0.0,0.0:5.69066e-29,0.00309688,0.996912
+chr1	9775295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9775348;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:50:0.359204:16,31:16-16,16-32:14,18,0,17:16,14:6,2|8,2|9,2|10,2|12,1|13,3|14,3|16,1|31,1:378.404:366.612,131.36:0.0,7.41562:0.000827229,0.999174,0.0	0/2:63:0.420572:27,29:26-27,25-29:10,19,0,32:26,2|27,8:5,2|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,3|16,1|18,1|19,3|21,1|23,1|24,1|26,3|27,1|28,1|29,1:481.528:326.675,113.385:0.363786,0.950392:1.92112e-27,2.60118e-07,1.0
+chr1	9776621	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9776664;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.728612:19,20:18-20,19-20:7,14,0,11:19,3|20,4:6,1|11,1|13,3|15,2|16,1|18,1|19,2:245.307:366.612,131.36:0.482006,0.258566:0.987298,0.0127278,6.95088e-09	3/0:35:0.690203:21,22:21-22,22-22:8,11,0,16:21,4|22,4:6,2|7,1|8,2|11,1|12,2|17,1|18,2|19,1|20,1|21,2|22,1:266.453:326.675,113.385:0.499779,0.0990099:6.32586e-11,0.695356,0.304656
+chr1	9778986	.	GTTTTGTTTTGTTTTGTTTT	GTTTT	.	.	END=9779005;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:28:0.989419:4,4:4-4,4-4:9,15,0,4:4,9:3,4:197.918:326.675,113.385:0.0,0.0:1.9785e-29,0.00514016,0.994873
+chr1	9781279	.	ACACACACACAC	ACACACAC	.	.	END=9781290;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:1.0:4,6:4-4,6-6:23,9,0,2:4,18|6,5:5,2:205.748:366.612,131.36:0.0,0.220506:8.01649e-15,1.0,3.01e-43	0/0:36:1.0:6,6:4-6,4-6:25,8,0,2:6,25:5,2:188.694:326.675,113.385:0.472766,0.472766:0.0,1.46617e-07,1.0
+chr1	9781294	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9781321;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:1.00001:6,6:6-6,6-6:21,10,0,3:6,21:3,1|5,2:198.83:366.612,131.36:0.0,0.0:1.0,3.46571e-06,1.64653e-38	0/0:37:1.0:7,7:7-7,7-7:24,8,0,4:7,24:3,2|6,2:202.003:326.675,113.385:0.0990099,0.0990099:0.0,3.46566e-07,1.0
+chr1	9782765	.	ACACACACACAC	.	.	.	END=9782776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:6,6:6-6,6-6:25,14,0,2:6,25:5,2:240.552:366.612,131.36:0.0,0.0:0.0,1.41851e-07,1.0	0/0:31:0.999979:6,6:6-6,6-6:18,11,0,2:6,18:4,1|5,1:185.59:326.675,113.385:0.0,0.0:5.9746e-41,1.31117e-05,0.999987
+chr1	9783489	.	TTAATTAATTAA	.	.	.	END=9783500;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.931726:3,3:3-3,3-3:7,12,0,0:3,7:NULL:143.564:366.612,131.36:0.0,0.0:1.00431e-22,0.0421595,0.957909	0/0:20:0.977339:3,3:3-3,3-3:9,11,0,0:3,9:NULL:133.384:326.675,113.385:0.0,0.0:7.88699e-29,0.0123908,0.987638
+chr1	9783579	.	TTTTTCTTTTTCTTTTTC	.	.	.	END=9783596;RU=tttttc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:191.105:366.612,131.36:0.0,0.0:0.0,3.26877e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:24,7,0,2:3,24:2,2:172.379:326.675,113.385:0.0,0.0:0.0,2.68502e-07,1.0
+chr1	9784280	.	CACACACACACA	.	.	.	END=9784291;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:6,6:6-6,6-6:48,3,0,10:6,48:5,10:295.928:366.612,131.36:0.0,0.0:0.0,1.23147e-14,1.0	0/0:62:1.0:6,6:6-6,6-6:37,17,0,8:6,37:4,1|5,7:375.86:326.675,113.385:0.0,0.0:0.0,2.25615e-11,1.0
+chr1	9784615	.	GAGGCAGAGGCAGAGGCA	GAGGCAGAGGCA	.	.	END=9784632;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.248705:2,2:2-4,2-4:2,0,0,0:2,2:NULL:7.85465:366.612,131.36:0.930482,0.930482:0.373682,0.62612,0.000254202	0/0:61:0.621118:3,3:2-6,2-6:24,34,0,2:2,3|3,21:2,1|5,1:451.761:326.675,113.385:1.18638,1.18638:0.0,0.0207558,0.979286
+chr1	9784654	.	AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	AGAGGCAGAGAGGCAGAGAGGCAG,AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	.	.	END=9784685;RU=agaggcag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.985133:3,5:3-7,4-7:8,0,0,0:3,3|4,2|5,3:NULL:45.1349:366.612,131.36:1.04922,0.802164:4.22929e-07,0.992433,0.00758428	0/0:52:0.999119:4,4:4-7,4-7:27,21,0,2:4,24|5,3:3,2:334.649:326.675,113.385:0.839777,0.839777:2.4e-44,9.83233e-08,1.0
+chr1	9784706	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=9784741;RU=agaggc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.0278135:1,1:3-3,3-3:0,0,0,0:NULL:NULL:-25.0:366.612,131.36:0.0,0.0:0.694258,0.277978,0.0277995	0/2:40:0.395279:6,8:6-6,6-9:21,13,0,6:6,21:3,2|4,3|8,1:264.25:326.675,113.385:0.0,1.03293:0.0,1.19432e-07,1.0
+chr1	9786376	.	GTTTGGTTTGGTTTG	.	.	.	END=9786390;RU=gtttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999852:3,3:3-3,3-3:16,8,0,0:3,16:NULL:133.565:366.612,131.36:0.0,0.0:0.0,8.14397e-05,0.999919	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:189.598:326.675,113.385:0.0,0.0:0.0,5.16134e-06,0.999995
+chr1	9788816	.	AACAACAACAAC	AACAACAACAACAAC	.	.	END=9788827;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.938741:5,5:5-5,5-5:8,9,0,0:5,8:NULL:109.917:366.612,131.36:0.0,0.0:4.20051e-38,0.0268514,0.973202	0/0:21:0.99973:4,4:4-4,4-4:15,4,0,2:4,15:3,2:112.361:326.675,113.385:0.0,0.0:0.0,0.000101813,0.999902
+chr1	9789386	.	ATTTTATTTTATTTT	.	.	.	END=9789400;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,11,0,2:3,22:2,2:208.141:366.612,131.36:0.0,0.0:0.0,8.52529e-07,1.0	0/0:26:0.999417:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.853:326.675,113.385:0.0,0.0:0.0,0.000427715,0.999575
+chr1	9796569	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=9796608;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.955718:13,13:12-14,12-14:12,19,0,4:12,2|13,10:5,1|7,1|9,1|12,1:263.311:366.612,131.36:0.397522,0.397522:1.0,0.0,0.0	0/0:39:0.851358:20,20:19-20,19-20:17,12,0,9:19,5|20,12:8,3|10,1|12,1|14,1|16,1|17,2:268.039:326.675,113.385:0.478127,0.478127:1.68661e-13,0.148339,0.85174
+chr1	9798093	.	CCGCCCGCCCGCCCGCCCGC	.	.	.	END=9798112;RU=ccgc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999086:5,5:5-5,5-5:13,17,0,5:5,13:2,1|3,1|4,3:247.0:366.612,131.36:0.0,0.0:3.414e-42,0.000565405,0.999438	0/0:44:1.0:5,5:5-5,5-5:23,17,0,4:5,23:3,1|4,3:281.783:326.675,113.385:0.0,0.0:0.0,3.9344e-07,1.0
+chr1	9800381	.	TTTTATTTTATTTTA	.	.	.	END=9800395;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.988017:3,3:3-3,3-3:10,8,0,0:3,10:NULL:117.52:366.612,131.36:0.0,0.0:6.69032e-33,0.00776259,0.992257	0/0:28:0.999938:3,3:3-3,3-3:17,8,0,3:3,17:2,3:164.191:326.675,113.385:0.0,0.0:0.0,2.82943e-05,0.999972
+chr1	9801889	.	TTCTTTCTTTCT	.	.	.	END=9801900;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999516:3,3:3-3,3-3:15,11,0,0:3,15:NULL:163.087:366.612,131.36:0.0,0.0:6.9e-44,0.000268222,0.999735	0/0:10:0.964687:3,3:3-3,3-3:8,2,0,0:3,8:NULL:48.5915:326.675,113.385:0.0,0.0:5.61729e-24,0.0150769,0.984957
+chr1	9803579	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=9803606;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.88391:15,15:15-16,15-16:6,18,0,7:15,6:6,1|7,1|8,1|11,1|13,2|14,1:243.146:366.612,131.36:0.398507,0.398507:1.37015e-19,0.0164038,0.98363	0/1:27:0.815792:14,15:14-14,14-15:17,6,0,4:14,13|15,4:8,2|10,1|12,1:173.844:326.675,113.385:0.0,0.498798:1.52138e-19,2.32917e-05,0.999979
+chr1	9804974	.	TTGTTTGTTTGTTTGT	.	.	.	END=9804989;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999777:4,4:4-4,4-4:16,6,0,0:4,16:NULL:118.431:366.612,131.36:0.0,0.0:0.0,0.000128633,0.999872	0/0:17:0.998613:4,4:4-4,4-4:13,4,0,0:4,13:NULL:89.6982:326.675,113.385:0.0,0.0:3.39e-43,0.000790602,0.999211
+chr1	9806598	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=9806615;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.853582:6,6:6-6,6-6:6,6,0,0:6,6:NULL:77.6782:366.612,131.36:0.0,0.0:4.9514e-15,0.0782325,0.921864	0/0:17:0.994489:6,6:6-6,6-6:11,6,0,0:6,11:NULL:99.6822:326.675,113.385:0.0,0.0:1.39924e-26,0.00350447,0.996504
+chr1	9806750	.	TTGTTGTTGTTG	.	.	.	END=9806761;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999921:4,4:4-4,4-4:17,11,0,0:4,17:NULL:161.608:366.612,131.36:0.0,0.0:0.0,4.79419e-05,0.999955	0/0:24:0.996284:4,4:4-4,4-4:12,12,0,0:4,12:NULL:157.937:326.675,113.385:0.0,0.0:4.87992e-40,0.00240843,0.997601
+chr1	9806981	.	CGGGCGGGCGGGCGGG	.	.	.	END=9806996;RU=cggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.989594:4,4:3-4,3-4:10,29,0,0:4,10:NULL:297.311:366.612,131.36:0.489073,0.489073:1.19331e-31,0.00907198,0.990948	0/0:22:0.986559:4,4:4-4,4-4:10,12,0,0:4,10:NULL:147.084:326.675,113.385:0.0,0.0:1.26129e-31,0.00847134,0.991547
+chr1	9807678	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9807697;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999646:4,4:4-4,4-4:14,14,0,3:4,14:2,1|3,2:201.224:366.612,131.36:0.0,0.0:0.0,0.000195752,0.999805	0/0:27:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:132.185:326.675,113.385:0.0,0.0:0.0,2.19567e-06,1.0
+chr1	9808179	.	TGTGTGTGTGTGTGTG	.	.	.	END=9808194;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999386:8,8:8-8,8-8:16,14,0,0:8,16:NULL:200.534:366.612,131.36:0.0,0.0:1.96352e-29,0.000336866,0.999666	0/0:32:0.999918:8,8:8-8,8-8:18,9,0,4:8,18:4,1|5,2|6,1:188.85:326.675,113.385:0.0990099,0.0990099:6.67356e-33,3.72853e-05,0.999964
+chr1	9808200	.	GAGAGAGAGAGA	.	.	.	END=9808211;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999693:6,6:6-6,6-6:16,18,0,0:6,16:NULL:230.695:366.612,131.36:0.0,0.0:1.655e-42,0.00018272,0.999819	0/0:34:1.0:6,6:6-6,6-6:24,10,0,0:6,24:NULL:186.575:326.675,113.385:0.0,0.0:0.0,6.11492e-07,1.0
+chr1	9808370	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	END=9808417;RU=tcca;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998063:10,10:10-10,10-10:12,13,0,11:10,12:4,2|6,4|7,2|8,1|9,2:253.601:366.612,131.36:0.0,0.0:0.999514,0.000488608,2.76787e-32	0/0:29:0.999744:12,12:7-12,7-12:16,6,0,5:12,16:2,1|6,1|8,1|9,1|11,1:163.278:326.675,113.385:2.13292,2.13292:2.5e-44,0.000172019,0.999828
+chr1	9808990	.	GTTGGTTGGTTG	.	.	.	END=9809001;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999405:3,3:3-3,3-3:14,13,0,0:3,14:NULL:177.168:366.612,131.36:0.0,0.0:0.0,0.000397118,0.999606	0/0:33:0.999972:3,3:3-3,3-3:17,12,0,4:3,17:2,4:202.829:326.675,113.385:0.0,0.0:0.0,1.99062e-05,0.99998
+chr1	9812671	.	ATTATATTATATTATATTATATTATATTATATTATATTAT	ATTATATTATATTATATTATATTATATTATATTATATTATATTATATTAT	.	.	END=9812710;RU=attat;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.929431:10,10:10-10,10-10:7,7,0,10:10,7:2,1|3,3|5,1|6,1|8,1|9,3:170.782:366.612,131.36:0.0,0.0:0.0,0.00194016,0.998064	0/0:16:0.97688:8,8:8-10,8-10:9,3,0,3:8,9:4,1|6,1|8,1:89.9138:326.675,113.385:0.985733,0.985733:7.60617e-29,0.00642369,0.993594
+chr1	9818042	.	CTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT	.	.	END=9818065;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.998255:8,8:8-8,8-8:13,12,0,4:8,13:4,1|5,1|7,2:196.425:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/0:39:0.994984:12,12:11-12,11-12:18,14,0,6:11,2|12,16:5,2|6,1|7,1|8,1|11,1:258.777:326.675,113.385:0.19802,0.19802:1.30381e-19,0.0050082,0.995003
+chr1	9818295	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9818334;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.48605:22,22:20-23,20-23:7,18,0,10:21,2|22,5:9,1|13,1|15,1|16,1|18,1|19,3|20,2:275.557:366.612,131.36:0.839893,0.839893:1.30512e-28,0.0037958,0.996216	0/0:36:0.966917:20,20:19-20,19-20:15,8,0,12:19,3|20,12:5,3|6,1|8,2|9,2|14,3|15,1:238.437:326.675,113.385:0.311527,0.311527:1.02404e-11,0.0317838,0.968277
+chr1	9820226	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9820273;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.694588:23,23:22-23,22-23:11,19,0,13:22,4|23,7:5,1|7,1|10,1|13,4|16,1|17,1|19,2|22,2:332.197:366.612,131.36:0.398507,0.398507:0.986097,0.01393,2.23481e-06	0/0:36:0.993385:24,24:21-25,21-25:15,10,0,9:24,15:5,1|7,1|8,1|10,1|11,2|13,1|16,1|20,1:235.877:326.675,113.385:0.561483,0.561483:3.0861e-17,0.000580728,0.999423
+chr1	9821837	.	ATTTATTTATTT	.	.	.	END=9821848;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.998511:3,3:3-3,3-3:13,7,0,0:3,13:NULL:117.565:366.612,131.36:0.0,0.0:5.13e-38,0.000747728,0.999256	0/0:30:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:156.203:326.675,113.385:0.0,0.0:0.0,4.60405e-07,1.0
+chr1	9821849	.	TATGTATGTATG	.	.	.	END=9821860;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.994045:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.202:366.612,131.36:0.0,0.0:4.28964e-32,0.00311552,0.996891	0/0:30:1.0:3,3:3-3,3-3:19,8,0,3:3,19:2,3:172.917:326.675,113.385:0.0,0.0:0.0,6.31206e-06,0.999994
+chr1	9823285	.	TTCTTTCTTTCT	.	.	.	END=9823296;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.990103:3,3:3-3,3-3:10,15,0,0:3,10:NULL:173.987:366.612,131.36:0.0,0.0:4.47423e-25,0.0067479,0.99327	0/0:32:1.00001:3,3:3-3,3-3:23,6,0,3:3,23:2,3:167.214:326.675,113.385:0.0,0.0:0.0,4.1974e-07,1.0
+chr1	9824948	.	TGTCTGTCTGTC	.	.	.	END=9824959;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:0.993508:3,3:3-6,3-6:40,25,0,2:3,34|5,2|6,4:2,2:434.181:366.612,131.36:1.34522,1.34522:0.0,8.55004e-11,1.0	0/0:41:1.00001:3,3:3-3,3-3:22,16,0,3:3,22:2,3:254.318:326.675,113.385:0.0,0.0:9.1404e-41,1.24183e-06,1.0
+chr1	9824960	.	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	.	.	END=9825019;RU=tcct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:75:0.894101:18,18:17-18,17-18:6,36,0,32:18,6:3,1|4,2|5,2|6,4|7,3|8,4|9,4|10,1|11,3|12,2|13,2|14,1|15,1|16,2:590.562:366.612,131.36:0.601439,0.601439:5.7e-44,0.0205646,0.979476	0/0:50:0.886348:15,15:15-15,15-15:6,21,0,23:15,6:3,1|4,2|5,1|6,3|7,2|8,5|10,1|11,1|12,2|13,4|15,1:385.936:326.675,113.385:0.19802,0.19802:2.6076e-24,0.0454539,0.95462
+chr1	9825656	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=9825687;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.836127:18,19:18-18,18-19:16,16,0,7:17,2|18,14:5,1|6,1|10,1|12,1|16,1|17,1|19,1:286.494:366.612,131.36:0.0,0.552507:0.0,4.13143e-09,1.0	0/0:43:0.929022:16,16:14-16,14-16:14,15,0,13:15,3|16,11:6,2|7,1|8,1|9,5|12,2|13,1|14,1:311.934:326.675,113.385:0.467134,0.467134:2.76491e-11,0.0697273,0.930367
+chr1	9827879	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	END=9827922;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.997821:12,12:12-14,12-14:13,9,0,6:12,13:2,1|3,1|4,1|5,1|6,1|11,1:185.044:366.612,131.36:0.938037,0.938037:1e-45,0.000621068,0.999384	0/0:34:0.990326:11,11:10-11,10-11:10,10,0,13:11,10:3,1|4,1|5,2|6,3|7,1|8,1|9,3|10,1:226.932:326.675,113.385:0.486863,0.486863:3.51965e-21,0.00474081,0.995273
+chr1	9829194	.	CAAACAAACAAA	.	.	.	END=9829205;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.931957:3,3:3-3,3-3:8,20,0,0:3,8:NULL:215.818:366.612,131.36:0.19802,0.19802:2.28635e-26,0.0536245,0.946459	0/0:23:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:110.934:326.675,113.385:0.0,0.0:0.0,7.53979e-06,0.999994
+chr1	9830384	.	TGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGTTGT	.	.	END=9830407;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.00001:7,7:7-7,7-7:20,5,0,6:7,20:4,2|5,2|6,2:170.636:366.612,131.36:0.0,0.0:0.999994,7.56169e-06,1.09839e-35	0/0:42:1.00001:8,8:8-9,8-9:21,13,0,7:8,21:4,1|5,2|6,1|7,3:258.526:326.675,113.385:0.236383,0.236383:0.0,2.35716e-06,1.0
+chr1	9830483	.	ATTTATTTATTTATTT	.	.	.	END=9830498;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999662:4,4:4-4,4-4:15,8,0,0:4,15:NULL:129.304:366.612,131.36:0.0,0.0:0.0,0.000198231,0.999804	0/0:40:1.0:4,4:4-4,4-4:25,9,0,6:4,25:2,2|3,4:227.354:326.675,113.385:0.0,0.0:0.0,9.26518e-08,1.0
+chr1	9831159	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA	.	.	END=9831204;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.875261:18,18:17-18,17-18:10,7,0,5:17,2|18,8:5,1|7,1|8,1|11,2:153.974:366.612,131.36:0.298675,0.298675:1.0,0.0,0.0	0/0:41:0.979102:23,23:21-23,21-23:10,12,0,17:23,10:5,3|8,1|9,1|11,2|14,2|15,2|16,1|18,1|20,2|21,1|22,1:293.713:326.675,113.385:0.374933,0.374933:2.1171e-11,0.00763937,0.992378
+chr1	9837956	.	AGAAAAGAAAAGAAA	AGAAA	.	.	END=9837970;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0297231:1,1:1-2,1-2:0,8,0,0:NULL:NULL:71.9503:366.612,131.36:0.390807,0.390807:0.0782578,0.444725,0.477189	0/0:30:1.00001:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.123:326.675,113.385:0.0,0.0:0.0,3.63503e-06,1.0
+chr1	9838257	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9838310;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:3:0.0468556:33,35:33-36,33-36:0,2,0,0:NULL:NULL:19.3453:366.612,131.36:0.950392,0.950392:0.0,0.0,1.0	0/3:39:0.304945:27,50:27-28,27-50:7,15,0,16:26,2|27,5:7,2|9,1|10,1|13,1|14,1|15,1|16,1|17,1|22,3|25,1|26,1|27,1|48,1:307.266:326.675,113.385:0.242928,10.4355:5.27967e-17,3.53169e-05,0.999964
+chr1	9839831	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9839872;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:15:0.141619:27,27:23-27,23-27:2,7,0,5:27,2:5,2|7,1|8,1|21,1:113.089:366.612,131.36:0.778346,0.778346:0.0,0.0,1.0	1/0:36:0.679783:20,21:17-21,21-22:14,9,0,9:20,6|21,8:5,1|9,1|10,1|13,2|15,2|16,1|20,1:225.393:326.675,113.385:1.12139,0.433614:2.84722e-07,0.680048,0.319968
+chr1	9840939	.	GGCAGGCAGGCA	GGCAGGCAGGCAGGCAGGCAGGCA	.	.	END=9840950;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.00129243:6,6:2-26,2-26:0,5,0,0:NULL:NULL:47.1789:366.612,131.36:9.54068,9.54068:0.00160588,0.112949,0.885551	0/0:43:1.0:3,3:3-3,3-3:26,14,0,3:3,26:2,3:250.977:326.675,113.385:0.0,0.0:0.0,5.21674e-08,1.0
+chr1	9841455	.	ATTTATTTATTT	.	.	.	END=9841466;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.745145:3,3:3-3,3-3:5,9,0,0:3,5:NULL:102.013:366.612,131.36:0.19802,0.19802:3.2461e-17,0.128006,0.872092	0/0:34:1.0:3,3:3-3,3-3:18,13,0,3:3,18:2,3:211.788:326.675,113.385:0.0,0.0:0.0,7.91138e-06,0.999994
+chr1	9844142	.	TTTGTTTTGTTTTGT	.	.	.	END=9844156;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:214.616:366.612,131.36:0.0,0.0:0.0,3.18974e-06,1.0	0/0:31:0.999995:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.375:326.675,113.385:0.0,0.0:0.0,1.24004e-05,0.999987
+chr1	9845384	.	TTTGTTTGTTTGTTTG	.	.	.	END=9845399;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.998791:4,4:4-4,4-4:13,17,0,4:4,13:2,1|3,3:239.939:366.612,131.36:0.0,0.0:1.195e-42,0.000582992,0.999422	0/0:39:1.00001:4,4:4-4,4-4:22,13,0,4:4,22:3,4:234.074:326.675,113.385:0.0,0.0:0.0,8.18899e-07,1.0
+chr1	9849556	.	ATAAATAAATAA	.	.	.	END=9849567;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999492:3,3:3-3,3-3:14,6,0,3:3,14:2,3:130.899:366.612,131.36:0.0,0.0:0.0,0.000200496,0.999803	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.533:326.675,113.385:0.0,0.0:0.0,2.51299e-06,1.0
+chr1	9852948	.	GTGTGTGTGTGT	.	.	.	END=9852959;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:6,6:6-6,6-6:25,20,0,4:6,25:4,1|5,3:310.852:366.612,131.36:0.139319,0.139319:0.0,1.32196e-07,1.0	0/0:80:1.0:6,6:6-6,6-6:52,20,0,7:6,52:4,1|5,5|6,1:443.199:326.675,113.385:0.0,0.0:0.0,6.31683e-16,1.0
+chr1	9853686	.	TGGGGGTGGGGGTGGGGG	.	.	.	END=9853703;RU=tggggg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.997794:3,3:3-3,3-3:12,4,0,0:3,12:NULL:85.2044:366.612,131.36:0.0,0.0:3.32937e-37,0.0011244,0.998877	0/0:24:0.999793:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.883:326.675,113.385:0.0,0.0:0.0,0.000124373,0.999879
+chr1	9854454	.	GGTGTGGGTGTGGGTGTG	.	.	.	END=9854471;RU=ggtgtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999504:3,3:3-3,3-3:15,24,0,0:3,15:NULL:283.829:366.612,131.36:0.0,0.0:0.0,0.000434667,0.999568	0/0:46:1.0:3,3:3-3,3-3:28,16,0,2:3,28:2,2:277.364:326.675,113.385:0.0,0.0:0.0,2.70576e-08,1.0
+chr1	9855719	.	AAAACAAAACAAAAC	.	.	.	END=9855733;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:20,24,0,3:3,20:2,3:313.064:366.612,131.36:0.0,0.0:0.0,9.3561e-06,0.999993	0/0:42:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:254.18:326.675,113.385:0.0,0.0:0.0,3.36552e-07,1.0
+chr1	9856153	.	TCTCTGTCTCTGTCTCTGTCTCTG	.	.	.	END=9856176;RU=tctctg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999708:4,4:4-4,4-4:15,16,0,2:4,15:3,2:226.754:366.612,131.36:0.0,0.0:0.0,0.000228585,0.999773	0/0:35:1.00001:4,4:4-4,4-4:22,11,0,2:4,22:2,1|3,1:200.712:326.675,113.385:0.0,0.0:0.0,1.50182e-06,1.0
+chr1	9856692	.	TTGGTTGGTTGG	.	.	.	END=9856703;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.147:366.612,131.36:0.0,0.0:0.0,6.00121e-06,0.999995	0/0:38:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:242.701:326.675,113.385:0.0,0.0:0.0,3.8504e-06,1.0
+chr1	9861552	.	CACACACACACA	.	.	.	END=9861563;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996689:6,6:6-6,6-6:12,17,0,0:6,12:NULL:199.806:366.612,131.36:0.0,0.0:1.73761e-30,0.00195815,0.998049	0/0:28:0.999915:6,6:6-6,6-6:17,11,0,0:6,17:NULL:168.335:326.675,113.385:0.0,0.0:5.68e-43,5.40906e-05,0.999948
+chr1	9862138	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9862197;RU=tc;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.283346:28,34:28-34,28-35:2,12,0,6:28,2:11,1|20,1|27,2|32,2:173.596:366.612,131.36:1.98781,2.06212:1.3212e-14,0.996905,0.00310473	0/3:23:0.243131:30,37:30-37,30-39:2,8,0,12:30,2:5,2|8,2|15,1|21,1|23,1|24,1|26,1|27,1|31,1|36,1:182.082:326.675,113.385:1.48138,3.03113:6.09945e-17,0.00714323,0.992873
+chr1	9863057	.	GTTGTTGTTGTT	.	.	.	END=9863068;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:222.293:366.612,131.36:0.0,0.0:0.0,3.25984e-07,1.0	0/0:44:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:248.583:326.675,113.385:0.0,0.0:0.0,1.11874e-08,1.0
+chr1	9864594	.	CACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACA	.	.	END=9864631;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.999921:14,14:14-14,14-14:22,14,0,9:13,2|14,20:6,2|9,2|11,2|12,1|13,2:289.763:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:37:0.675596:19,19:18-19,18-19:14,11,0,12:18,4|19,10:7,3|8,1|11,1|12,2|13,1|15,1|18,2|19,1:265.578:326.675,113.385:0.484441,0.484441:1.43435e-18,0.32366,0.676349
+chr1	9867773	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9867818;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.611123:24,25:23-24,23-25:9,6,0,0:23,3|24,4|25,2:NULL:108.064:366.612,131.36:0.509492,0.987918:2.54692e-12,0.0019901,0.998018	0/3:58:0.323888:23,30:22-23,22-31:17,13,0,26:22,7|23,10:5,1|7,3|9,2|10,1|11,1|12,1|13,1|15,1|17,4|18,3|19,1|20,1|21,4|26,1|30,1:432.974:326.675,113.385:0.236383,3.65447:3.68409e-18,4.2178e-08,1.0
+chr1	9869113	.	AAACAAACAAAC	.	.	.	END=9869124;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:190.381:366.612,131.36:0.0,0.0:0.0,4.82552e-06,0.999995	0/0:48:1.0:3,3:3-3,3-3:29,16,0,3:3,29:2,3:287.382:326.675,113.385:0.0,0.0:0.0,5.28486e-09,1.0
+chr1	9869920	.	TTATTTATTTAT	TTATTTAT	.	.	END=9869931;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:1.0:2,2:2-2,2-2:19,19,0,0:2,19:NULL:248.076:366.612,131.36:0.0,0.0:0.999994,7.2952e-06,0.0	0/0:48:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:295.033:326.675,113.385:0.0,0.0:0.0,3.15431e-08,1.0
+chr1	9870260	.	AAAACAAAACAAAAC	.	.	.	END=9870274;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999959:3,3:3-3,3-3:17,10,0,2:3,17:2,2:178.341:366.612,131.36:0.0,0.0:0.0,2.2708e-05,0.999979	0/0:47:1.0:3,3:3-3,3-3:26,19,0,2:3,26:2,2:291.141:326.675,113.385:0.0,0.0:0.0,3.40741e-08,1.0
+chr1	9871386	.	AAACAAACAAAC	.	.	.	END=9871397;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999952:3,3:3-3,3-3:17,5,0,2:3,17:2,2:125.436:366.612,131.36:0.0,0.0:0.0,1.64594e-05,0.999986	0/0:31:0.999928:3,3:3-3,3-3:17,14,0,0:3,17:NULL:191.988:326.675,113.385:0.0,0.0:0.0,5.03227e-05,0.999949
+chr1	9879082	.	TTAATTAATTAATTAA	.	.	.	END=9879097;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:20,9,0,0:4,20:NULL:159.068:366.612,131.36:0.0,0.0:0.0,6.97538e-06,0.999994	0/0:28:0.999416:4,4:2-4,2-4:14,11,0,2:4,14:2,2:168.38:326.675,113.385:0.838725,0.838725:0.0,0.000365613,0.999636
+chr1	9879249	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9879284;RU=ct;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.992848:15,15:14-16,14-16:16,17,0,8:14,2|15,14:5,1|9,1|10,2|13,1|14,3:289.126:366.612,131.36:0.243733,0.243733:0.99997,3.39202e-05,1.05713e-27	2/0:18:0.767584:17,18:16-18,16-18:5,8,0,4:17,2|18,3:5,1|12,1|13,1|18,1:129.478:326.675,113.385:0.680364,0.40047:3.97845e-11,0.813711,0.186351
+chr1	9879878	.	AAATAAATAAAT	.	.	.	END=9879889;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999975:3,3:3-3,3-3:18,23,0,0:3,18:NULL:275.822:366.612,131.36:0.0,0.0:0.0,2.97102e-05,0.999971	0/0:18:0.999676:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.7982:326.675,113.385:0.0,0.0:0.0,0.000170969,0.999833
+chr1	9881346	.	AAACAAACAAAC	.	.	.	END=9881357;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99988:3,3:3-3,3-3:16,13,0,2:3,16:2,2:195.991:366.612,131.36:0.0,0.0:0.0,7.08186e-05,0.999933	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:169.089:326.675,113.385:0.0,0.0:0.0,5.3849e-06,0.999995
+chr1	9882998	.	AGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAG	.	.	END=9883013;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.899765:11,11:10-11,10-11:20,15,0,0:10,4|11,16:NULL:232.783:366.612,131.36:0.496236,0.496236:0.0,5.84748e-06,0.999995	0/0:46:0.999933:8,8:7-8,7-8:27,19,0,0:7,3|8,24:NULL:287.503:326.675,113.385:0.195027,0.195027:1.96e-43,6.88518e-05,0.999933
+chr1	9885007	.	AAATAAATAAAT	.	.	.	END=9885018;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999448:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.404:366.612,131.36:0.0,0.0:0.0,0.000289629,0.999712	0/0:43:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:265.343:326.675,113.385:0.0,0.0:0.0,6.64981e-07,1.0
+chr1	9885057	.	AAGCAAGCAAGCAAGC	.	.	.	END=9885072;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999615:4,4:4-4,4-4:14,13,0,2:4,14:3,2:183.777:366.612,131.36:0.0,0.0:0.0,0.000180652,0.99982	0/0:49:1.0:4,4:4-4,4-4:22,22,0,5:4,22:2,1|3,4:322.98:326.675,113.385:0.0,0.0:0.0,9.46111e-07,1.0
+chr1	9885469	.	AAACAAACAAACAAACAAAC	.	.	.	END=9885488;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999674:5,5:5-5,5-5:15,23,0,2:5,15:3,1|4,1:286.081:366.612,131.36:0.0,0.0:0.0,0.000260613,0.999742	0/0:32:0.999898:5,5:5-5,5-5:16,12,0,4:5,16:2,1|4,3:208.683:326.675,113.385:0.0,0.0:0.0,5.205e-05,0.999949
+chr1	9887284	.	GTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9887299;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:0.209314:14,14:8-14,8-14:2,44,0,4:14,2:4,1|7,1|12,2:449.64:366.612,131.36:1.88218,1.88218:0.0,0.0,1.0	0/0:48:1.00001:8,8:8-8,8-8:22,23,0,2:8,22:6,2:333.026:326.675,113.385:0.0,0.0:2.00117e-39,1.37359e-06,1.0
+chr1	9887485	.	AACAACAACAAC	AAC,AACAACAAC	.	.	END=9887496;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:12:0.0586291:1,3:3-6,3-6:0,10,0,0:NULL:NULL:97.0339:366.612,131.36:1.11394,1.06646:0.245824,0.507488,0.246708	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:224.506:326.675,113.385:0.0,0.0:0.0,2.42337e-07,1.0
+chr1	9890042	.	TTACTTACTTAC	.	.	.	END=9890053;RU=ttac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:29,22,0,0:3,29:NULL:313.361:366.612,131.36:0.0,0.0:0.0,3.53268e-08,1.0	0/0:45:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:258.912:326.675,113.385:0.0,0.0:0.0,1.2277e-08,1.0
+chr1	9892145	.	TGCTTGCTTGCT	.	.	.	END=9892156;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999911:3,3:3-3,3-3:17,6,0,0:3,17:NULL:119.963:366.612,131.36:0.0,0.0:0.0,5.25139e-05,0.999948	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:222.228:326.675,113.385:0.0,0.0:0.0,1.95093e-08,1.0
+chr1	9893504	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9893541;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0238588:1,1:1-7,1-7:0,28,0,0:NULL:NULL:259.638:366.612,131.36:1.75429,1.75429:0.97156,0.0284034,8.91644e-05	0/2:52:0.297224:19,24:19-19,19-25:17,15,0,18:18,2|19,15:5,1|6,1|7,3|8,2|9,1|10,1|12,1|13,3|15,1|16,2|18,1|24,1:372.061:326.675,113.385:0.0,2.45313:2.49488e-16,1.29365e-05,0.999987
+chr1	9893935	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC,TCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9893984;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:8:0.00457127:1,2:1-7,1-7:0,8,0,0:NULL:NULL:67.714:366.612,131.36:2.33974,2.32123:0.544137,0.406993,0.0490268	0/3:38:0.376588:25,27:22-25,22-28:4,22,0,12:25,4:11,2|12,1|14,2|15,1|17,2|18,1|21,1|22,1|27,1:312.196:326.675,113.385:0.5093,1.40594:2.97015e-12,0.000131841,0.999872
+chr1	9898438	.	GTATGTATGTAT	.	.	.	END=9898449;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.978492:3,3:3-3,3-3:9,14,0,0:3,9:NULL:166.738:366.612,131.36:0.0,0.0:1.9341e-33,0.0150783,0.984951	0/0:42:1.0:3,3:3-3,3-3:25,15,0,2:3,25:2,2:259.815:326.675,113.385:0.0,0.0:0.0,1.99488e-07,1.0
+chr1	9901685	.	TTTGTTTGTTTG	.	.	.	END=9901696;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.956383:3,3:3-3,3-3:8,19,0,0:3,8:NULL:204.764:366.612,131.36:0.0,0.0:4.14176e-25,0.0298128,0.970245	0/0:37:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:227.902:326.675,113.385:0.0,0.0:0.0,1.54881e-06,1.0
+chr1	9902992	.	CAGCCAGCCAGC	.	.	.	END=9903003;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.493114:3,3:1-3,1-3:4,13,0,0:3,4:NULL:138.826:366.612,131.36:0.464609,0.464609:6.93932e-13,0.263274,0.736731	0/0:18:0.891041:3,3:3-3,3-3:7,11,0,0:3,7:NULL:128.4:326.675,113.385:0.0,0.0:4.43637e-22,0.0645661,0.935524
+chr1	9903318	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9903365;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.411727:25,28:25-25,25-28:7,24,0,13:25,7:7,1|8,1|10,1|11,2|14,1|15,1|19,1|21,1|22,1|24,1|25,1|28,1:363.359:366.612,131.36:0.0,1.47853:1.40748e-31,1.59087e-07,1.0	0/1:50:0.996071:24,25:24-25,24-25:16,16,0,18:23,2|24,9|25,5:5,2|6,1|7,1|8,1|9,4|11,1|13,1|14,2|16,1|19,1|20,1|21,1|22,1:377.873:326.675,113.385:0.195027,0.345543:1.73537e-16,5.01236e-05,0.999949
+chr1	9905688	.	TAAATAAATAAA	.	.	.	END=9905699;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:245.165:366.612,131.36:0.0,0.0:0.0,6.23891e-06,0.999995	0/0:26:0.999304:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.728:326.675,113.385:0.0,0.0:0.0,0.000467848,0.999537
+chr1	9908942	.	CTGTCTGTCTGT	.	.	.	END=9908953;RU=ctgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999835:3,3:3-3,3-3:16,19,0,0:3,16:NULL:238.973:366.612,131.36:0.0,0.0:0.0,9.62251e-05,0.999904	0/0:38:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:254.86:326.675,113.385:0.0,0.0:0.0,9.79986e-06,0.999993
+chr1	9909330	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=9909349;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999896:4,4:4-4,4-4:17,21,0,0:4,17:NULL:262.052:366.612,131.36:0.0,0.0:0.0,9.88637e-05,0.999903	0/0:23:0.999776:4,4:4-4,4-4:15,4,0,4:4,15:2,2|3,2:126.019:326.675,113.385:0.0,0.0:2e-44,8.28355e-05,0.999918
+chr1	9909905	.	TGGTGGTGGTGGTGG	.	.	.	END=9909919;RU=tgg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999914:5,5:5-5,5-5:16,15,0,2:5,16:4,2:213.466:366.612,131.36:0.0,0.0:0.0,4.13652e-05,0.999962	0/0:37:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:4,2:225.98:326.675,113.385:0.0,0.0:0.0,1.89249e-06,1.0
+chr1	9910263	.	ATGTATGTATGTATGTATGTATGTATGTATGT	ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT,ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	END=9910294;RU=atgt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:1.0:11,12:11-11,12-12:13,18,0,5:11,7|12,6:4,1|9,1|10,1|11,2:268.62:366.612,131.36:0.0990099,0.0:0.0,0.0,1.0	0/0:57:1.0:8,8:8-9,8-9:22,22,0,11:8,22:2,1|3,1|4,4|5,1|7,4:372.409:326.675,113.385:0.169767,0.169767:0.0,1.6759e-06,1.0
+chr1	9911074	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9911103;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.940177:21,21:20-21,20-21:11,12,0,16:20,2|21,9:5,1|7,2|11,1|12,1|13,2|14,3|15,1|18,1|19,1|20,3:293.216:366.612,131.36:0.422623,0.422623:0.0,0.0,1.0	0/0:50:0.995963:15,15:14-16,14-16:23,16,0,9:13,2|14,3|15,18:6,1|9,2|11,2|12,1|13,1|14,2:331.675:326.675,113.385:0.430892,0.430892:3.29582e-21,0.00404109,0.995968
+chr1	9911501	.	TTGTTGTTGTTG	TTG	.	.	END=9911512;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.0667818:1,1:1-3,1-3:0,17,0,0:NULL:NULL:153.882:366.612,131.36:0.461008,0.461008:0.326566,0.517452,0.156012	0/0:25:0.999989:4,4:4-4,4-4:18,5,0,2:4,18:3,2:133.462:326.675,113.385:0.0,0.0:0.0,1.61308e-05,0.999986
+chr1	9913930	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=9913979;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.600148:19,19:18-19,18-19:5,14,0,6:19,5:6,1|8,1|11,1|12,1|13,2:197.352:366.612,131.36:0.352842,0.352842:1.0,0.0,0.0	0/0:39:0.284415:25,25:12-25,12-25:6,20,0,11:24,2|25,4:5,1|9,2|11,3|12,1|13,1|16,2|21,1:300.186:326.675,113.385:5.37526,5.37526:0.00137437,0.683164,0.31548
+chr1	9914697	.	TTATTTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTATTTATTTATTTAT	.	.	END=9914724;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.936097:9,9:9-9,9-9:7,13,0,3:9,7:4,1|7,1|8,1:170.463:366.612,131.36:0.0,0.0:1.69215e-38,0.00880929,0.99121	0/0:20:0.999825:7,7:7-7,7-7:16,4,0,0:7,16:NULL:106.409:326.675,113.385:0.0,0.0:1.23276e-40,0.000110242,0.999894
+chr1	9914909	.	TATTTATTTATT	.	.	.	END=9914920;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999952:3,3:3-3,3-3:17,9,0,0:3,17:NULL:149.228:366.612,131.36:0.0,0.0:0.0,3.09509e-05,0.999971	0/0:38:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:237.639:326.675,113.385:0.0,0.0:0.0,2.51367e-06,1.0
+chr1	9916204	.	ACAAACAAACAAACAAACAAACAA	.	.	.	END=9916227;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999805:6,6:6-6,6-6:15,17,0,5:6,15:3,1|4,1|5,3:258.758:366.612,131.36:0.0,0.0:1.112e-41,0.000114363,0.999887	0/0:42:1.0:6,6:6-6,6-6:22,14,0,6:6,22:3,1|4,1|5,4:270.528:326.675,113.385:0.0,0.0:0.0,5.54593e-07,1.0
+chr1	9916809	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9916844;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:43:0.354926:21,22:21-23,22-23:8,24,0,11:21,3|22,3|23,2:5,2|9,3|11,1|12,1|14,1|15,1|16,1|21,1:359.386:366.612,131.36:0.969893,0.494455:0.0,0.0,1.0	0/0:27:0.987027:18,18:17-19,17-19:14,9,0,3:17,2|18,12:7,1|9,1|15,1:173.626:326.675,113.385:0.329868,0.329868:9.77748e-14,0.0120442,0.987981
+chr1	9918705	.	ATTTATTTATTT	.	.	.	END=9918716;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999363:3,3:3-3,3-3:14,20,0,2:3,14:2,2:254.897:366.612,131.36:0.0,0.0:0.0,0.00037565,0.999628	0/0:39:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:223.823:326.675,113.385:0.0,0.0:0.0,2.44769e-07,1.0
+chr1	9920939	.	CACCACCACCAC	.	.	.	END=9920950;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997915:4,4:4-4,4-4:12,13,0,3:4,12:3,3:186.52:366.612,131.36:0.0,0.0:9.20825e-40,0.000727877,0.999278	0/0:25:0.999758:4,4:4-4,4-4:15,8,0,2:4,15:3,2:148.712:326.675,113.385:0.0,0.0:0.0,0.000113113,0.999888
+chr1	9922186	.	GTTTGTTTGTTTGTTT	.	.	.	END=9922201;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:4,4:4-4,4-4:23,14,0,4:4,23:2,3|3,1:250.895:366.612,131.36:0.0,0.0:0.0,6.67579e-07,1.0	0/0:42:1.00001:4,4:4-4,4-4:22,15,0,5:4,22:2,2|3,3:261.244:326.675,113.385:0.0,0.0:0.0,9.56311e-07,1.0
+chr1	9923740	.	AAACAAACAAAC	.	.	.	END=9923751;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:221.137:366.612,131.36:0.0,0.0:0.0,7.15839e-08,1.0	0/0:32:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:173.336:326.675,113.385:0.0,0.0:0.0,9.15984e-07,1.0
+chr1	9926111	.	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC	.	.	.	END=9926146;RU=tgcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:9,9:9-9,9-9:26,27,0,3:9,26:5,1|6,2:385.972:366.612,131.36:0.0,0.0:0.0,3.23186e-07,1.0	0/0:60:1.0:9,9:9-9,9-9:30,16,0,14:9,30:2,1|3,4|4,2|5,2|6,2|7,1|8,2:372.654:326.675,113.385:0.0,0.0:0.0,2.1782e-09,1.0
+chr1	9927265	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACAC,ACACACACACACACACACACACACACACACAC	.	.	END=9927298;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.999983:8,8:8-8,8-8:20,23,0,3:8,20:5,2|7,1:316.603:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/0:46:0.938:16,17:16-18,17-17:23,16,0,6:16,7|17,14|18,2:6,1|10,1|11,1|14,2|15,1:321.003:326.675,113.385:0.589421,0.0:5.79561e-16,0.937993,0.0620969
+chr1	9928606	.	CAAACAAACAAACAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAA,CAAACAAACAAACAAACAAACAAACAAA	.	.	END=9928637;RU=caaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.999999:6,7:6-6,6-7:27,8,0,2:6,20|7,7:5,1|6,1:217.641:366.612,131.36:0.0,0.298675:1.0,1.35717e-12,0.0	0/0:47:1.0:8,8:8-8,8-8:19,16,0,12:8,19:2,1|3,2|5,4|6,1|7,4:310.491:326.675,113.385:0.0,0.0:7.54194e-38,6.13532e-06,0.999994
+chr1	9929327	.	ATTTATTTATTT	.	.	.	END=9929338;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999178:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.782:366.612,131.36:0.0,0.0:5.32e-43,0.000467032,0.999537	0/0:37:1.0:3,3:3-3,3-3:19,16,0,2:3,19:2,2:226.484:326.675,113.385:0.0,0.0:0.0,6.84549e-06,0.999994
+chr1	9931528	.	GTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9931551;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.300779:25,27:24-25,24-27:3,10,0,14:25,3:6,1|7,1|8,2|11,1|12,2|14,2|22,2|23,1|24,1|27,1:213.196:366.612,131.36:0.414188,1.25785:0.0,0.0,1.0	0/0:54:0.999892:12,12:12-12,12-12:25,20,0,8:11,3|12,22:6,3|8,2|9,1|10,2:355.594:326.675,113.385:0.0990099,0.0990099:4.0669e-29,0.000110906,0.999889
+chr1	9932293	.	CATGCATGCATG	.	.	.	END=9932304;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999915:3,3:3-3,3-3:17,10,0,0:3,17:NULL:159.901:366.612,131.36:0.0,0.0:0.0,4.9656e-05,0.999949	0/0:27:1.0:3,3:3-3,3-3:24,3,0,0:3,24:NULL:123.691:326.675,113.385:0.0,0.0:0.0,3.65319e-07,1.0
+chr1	9932642	.	TTGTTGTTGTTG	.	.	.	END=9932653;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998884:4,4:4-4,4-4:14,26,0,0:4,14:NULL:306.3:366.612,131.36:0.0,0.0:0.0,0.000958701,0.999044	0/0:51:1.0:4,4:4-4,4-4:36,13,0,2:4,36:3,2:276.95:326.675,113.385:0.0,0.0:0.0,6.98338e-11,1.0
+chr1	9932828	.	ATTTATTTATTT	.	.	.	END=9932839;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:22,32,0,0:3,22:NULL:379.475:366.612,131.36:0.0,0.0:0.0,1.63408e-06,1.0	0/0:57:1.0:3,3:3-3,3-3:30,23,0,4:3,30:2,4:361.396:326.675,113.385:0.0,0.0:0.0,6.78511e-09,1.0
+chr1	9934352	.	AATAAATAAATA	AATA	.	.	END=9934363;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.12816:1,1:1-2,1-2:0,18,0,0:NULL:NULL:181.554:366.612,131.36:0.48807,0.48807:0.324607,0.534066,0.141371	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:234.426:326.675,113.385:0.0,0.0:0.0,2.12861e-07,1.0
+chr1	9935825	.	AATAAATAAATA	.	.	.	END=9935836;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999946:3,3:3-3,3-3:17,9,0,3:3,17:2,3:174.81:366.612,131.36:0.0,0.0:0.0,2.60871e-05,0.999978	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:168.481:326.675,113.385:0.0,0.0:0.0,6.61641e-06,0.999994
+chr1	9936450	.	CACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9936469;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.754773:29,29:14-30,14-30:5,26,0,21:29,5:6,1|9,2|11,2|13,1|15,1|16,1|17,3|19,1|21,1|22,1|24,3|25,1|26,1|27,2:431.551:366.612,131.36:7.38805,7.38805:0.0,0.0,1.0	0/0:46:0.999835:10,10:10-10,10-10:25,10,0,10:9,2|10,23:5,1|7,3|8,1|9,5:282.769:326.675,113.385:0.0,0.0:2.73707e-27,0.000164869,0.999835
+chr1	9937602	.	AGACAGACAGAC	.	.	.	END=9937613;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:251.557:366.612,131.36:0.0,0.0:0.0,5.17987e-08,1.0	0/0:55:1.0:3,3:3-3,3-3:38,17,0,0:3,38:NULL:306.04:326.675,113.385:0.0,0.0:0.0,3.47401e-11,1.0
+chr1	9938474	.	ATTTATTTATTT	.	.	.	END=9938485;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.998051:3,3:3-3,3-3:12,20,0,0:3,12:NULL:227.664:366.612,131.36:0.0,0.0:2.00917e-35,0.00146511,0.998541	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:201.908:326.675,113.385:0.0,0.0:0.0,3.09853e-06,1.0
+chr1	9944919	.	AAAGAAAGAAAGAAAG	.	.	.	END=9944934;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.291195:4,4:1-4,1-4:4,21,0,0:4,4:NULL:210.783:366.612,131.36:1.42918,1.42918:4.83796e-12,0.605732,0.394331	0/0:22:0.998394:4,4:4-4,4-4:13,9,0,0:4,13:NULL:133.016:326.675,113.385:0.0,0.0:1.19106e-38,0.00113158,0.998875
+chr1	9945172	.	AAATAAATAAAT	AAATAAATAAATAAAT	.	.	END=9945183;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.94616:3,4:3-3,3-4:14,9,0,2:3,12|4,2:2,2:162.388:366.612,131.36:0.0,0.499779:4.32895e-35,1.41116e-05,0.999987	0/0:23:0.999466:3,3:3-3,3-3:14,9,0,0:3,14:NULL:135.122:326.675,113.385:0.0,0.0:1.65127e-37,0.000301198,0.999704
+chr1	9946807	.	ATTTATTTATTTATTT	.	.	.	END=9946822;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,18,0,0:4,23:NULL:256.771:366.612,131.36:0.0,0.0:0.0,1.9099e-06,1.0	0/0:24:0.997971:4,4:4-4,4-4:12,9,0,3:4,12:3,3:150.242:326.675,113.385:0.0,0.0:4.41124e-35,0.000867772,0.999135
+chr1	9947166	.	TCTCTCTCTCTC	.	.	.	END=9947177;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.996535:6,6:6-6,6-6:12,12,0,0:6,12:NULL:156.996:366.612,131.36:0.0,0.0:1.88734e-26,0.0018215,0.998185	0/0:24:0.999224:6,6:6-6,6-6:14,10,0,0:6,14:NULL:147.189:326.675,113.385:0.0,0.0:9.76726e-31,0.000426219,0.999576
+chr1	9948124	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9948161;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:67:0.9884:20,20:19-20,19-20:25,25,0,15:19,6|20,19:5,2|8,2|10,1|13,2|14,2|15,1|16,2|19,2|20,1:474.865:366.612,131.36:0.407748,0.407748:0.0,3.44628e-07,1.0	0/0:46:0.71969:19,19:14-21,14-21:22,12,0,10:17,2|18,5|19,15:4,1|6,4|9,1|10,1|13,1|18,2:308.056:326.675,113.385:1.22324,1.22324:1.63252e-15,0.280307,0.719693
+chr1	9948680	.	GCTAGCTAGCTA	.	.	.	END=9948691;RU=gcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:215.978:366.612,131.36:0.0,0.0:0.0,1.10919e-06,1.0	0/0:27:0.999737:3,3:3-3,3-3:15,10,0,2:3,15:2,2:164.22:326.675,113.385:0.0,0.0:0.0,0.000118598,0.999881
+chr1	9949344	.	GGAGGGAGGGAG	.	.	.	END=9949355;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:23,19,0,0:3,23:NULL:267.64:366.612,131.36:0.0,0.0:0.0,1.65122e-06,1.0	0/0:24:0.99956:3,3:3-3,3-3:14,10,0,0:3,14:NULL:148.374:326.675,113.385:0.0,0.0:0.0,0.000285647,0.999719
+chr1	9949792	.	CACACACACACA	CACACACACACACA	.	.	END=9949803;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.828594:7,7:6-8,6-8:7,22,0,0:7,7:NULL:230.641:366.612,131.36:0.806551,0.806551:3.48337e-18,0.105813,0.894289	0/0:32:0.75241:6,6:6-7,6-7:16,16,0,0:6,14|7,2:NULL:225.665:326.675,113.385:0.472558,0.472558:5.09718e-31,0.000158717,0.999842
+chr1	9952017	.	AATTAATTAATTAATT	.	.	.	END=9952032;RU=aatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999444:4,4:4-4,4-4:14,26,0,0:4,14:NULL:294.719:366.612,131.36:0.0,0.0:1.99e-43,0.000478412,0.999523	0/0:24:0.998082:4,4:4-4,4-4:13,11,0,0:4,13:NULL:147.239:326.675,113.385:0.0,0.0:8.69591e-40,0.00148927,0.998518
+chr1	9954129	.	AAATAAATAAATAAAT	.	.	.	END=9954144;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999395:4,4:4-4,4-4:14,19,0,0:4,14:NULL:228.251:366.612,131.36:0.0,0.0:0.0,0.000436763,0.999567	0/0:30:0.999958:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:176.546:326.675,113.385:0.0,0.0:0.0,2.22757e-05,0.999979
+chr1	9955647	.	AAAACAAAACAAAAC	.	.	.	END=9955661;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999977:3,3:3-3,3-3:18,20,0,0:3,18:NULL:256.039:366.612,131.36:0.0,0.0:0.0,3.37449e-05,0.99997	0/0:44:1.0:3,3:3-3,3-3:23,21,0,0:3,23:NULL:298.006:326.675,113.385:0.0,0.0:0.0,2.53549e-06,1.0
+chr1	9956363	.	TGTGTGTGTGTG	.	.	.	END=9956374;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:0.599682:6,6:6-10,6-10:27,17,0,3:6,27:5,2|7,1:299.204:366.612,131.36:1.03739,1.03739:0.0,1.96076e-08,1.0	0/0:35:1.0:6,6:5-6,5-6:24,8,0,2:6,24:5,2:186.469:326.675,113.385:0.169767,0.169767:0.0,2.89937e-07,1.0
+chr1	9956833	.	TTTCTTTCTTTC	.	.	.	END=9956844;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:2-3,2-3:22,17,0,0:3,22:NULL:240.663:366.612,131.36:0.270063,0.270063:0.0,1.76112e-06,1.0	0/0:34:1.00001:3,3:3-3,3-3:23,11,0,0:3,23:NULL:194.583:326.675,113.385:0.0,0.0:0.0,8.88355e-07,1.0
+chr1	9958725	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=9958749;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999999:5,5:5-5,5-5:18,16,0,7:5,18:2,1|3,1|4,5:263.611:366.612,131.36:0.0,0.0:0.0,1.04761e-05,0.999993	0/0:41:1.0:5,5:5-5,5-5:24,14,0,3:5,24:3,1|4,2:243.839:326.675,113.385:0.0,0.0:0.0,2.1328e-07,1.0
+chr1	9964154	.	CACACACACACA	CACACACACA	.	.	END=9964165;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:44:0.973327:5,6:5-6,6-6:23,16,0,4:5,4|6,19:4,1|5,3:292.296:366.612,131.36:0.498011,0.0:1.09539e-28,0.973325,0.0267257	0/0:40:1.0:6,6:6-6,6-6:23,17,0,0:6,23:NULL:241.746:326.675,113.385:0.0,0.0:1.526e-42,1.09676e-06,1.0
+chr1	9966035	.	TATTATTATTAT	.	.	.	END=9966046;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:20,17,0,0:4,20:NULL:235.128:366.612,131.36:0.0,0.0:0.0,1.06038e-05,0.999993	0/0:28:0.999974:4,4:4-4,4-4:18,10,0,0:4,18:NULL:156.766:326.675,113.385:0.0,0.0:0.0,3.35008e-05,0.99997
+chr1	9967640	.	CCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCG	CCCGCCCGCCCGCCCGCCCG	.	.	END=9967671;RU=cccg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999921:5,5:5-5,5-5:17,26,0,6:5,17:4,6:355.515:366.612,131.36:0.0,0.0:0.999993,9.34284e-06,0.0	0/0:69:1.0:8,8:8-8,8-8:27,33,0,9:8,27:4,2|5,4|6,1|7,2:505.436:326.675,113.385:0.0,0.0:0.0,1.28947e-07,1.0
+chr1	9969740	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=9969757;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.0:7,7:7-7,7-7:20,11,0,2:7,20:5,2:199.72:366.612,131.36:0.0,0.0:0.0,3.86837e-06,1.0	0/0:34:1.0:6,6:6-6,6-6:19,10,0,4:6,19:5,4:198.517:326.675,113.385:0.0990099,0.0990099:0.0,6.04175e-06,0.999994
+chr1	9970610	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9970627;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:32:0.279716:18,27:18-18,16-27:10,11,0,9:16,2|18,8:7,1|9,1|10,1|12,1|13,1|16,1|17,2|24,1:233.594:366.612,131.36:0.0,4.23348:0.0,0.0,1.0	0/1:30:0.362935:9,11:9-9,9-11:15,10,0,5:9,15:5,1|6,1|8,2|11,1:205.017:326.675,113.385:0.0,0.885129:1.01799e-27,4.71352e-08,1.0
+chr1	9971832	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=9971863;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.992697:6,6:6-6,6-6:10,15,0,2:6,10:4,1|5,1:203.936:366.612,131.36:0.0990099,0.0990099:0.998944,0.0010614,4.04235e-28	0/0:32:0.995512:8,8:8-8,8-8:11,11,0,10:8,11:3,1|4,3|5,1|6,3|7,2:221.554:326.675,113.385:0.0,0.0:1.77565e-31,0.00219471,0.997813
+chr1	9973536	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9973555;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:59:0.902665:12,12:8-22,8-22:27,26,0,4:11,6|12,21:6,1|7,2|19,1:424.73:366.612,131.36:4.08502,4.08502:0.0,1.04962e-07,1.0	0/0:53:0.999501:10,10:10-11,10-11:29,14,0,8:10,26|11,3:4,2|5,1|6,1|7,2|8,1|9,1:318.327:326.675,113.385:0.236383,0.236383:1.51294e-36,3.1442e-08,1.0
+chr1	9974995	.	CCTCCCTCCCTCCCTCCCTCCCTCCCTC	CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC,CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC	.	.	END=9975022;RU=cctc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.138925:9,12:9-12,9-12:0,18,0,5:NULL:5,2|6,1|7,1|11,1:203.91:366.612,131.36:1.41185,1.03975:0.0,0.0,1.0	0/0:43:0.946905:7,7:6-7,6-7:7,21,0,14:7,7:2,2|3,4|4,2|6,6:331.615:326.675,113.385:0.498798,0.498798:6.1531e-18,0.02783,0.972222
+chr1	9975875	.	AAACAAACAAAC	.	.	.	END=9975886;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999883:3,3:3-3,3-3:16,23,0,0:3,16:NULL:280.224:366.612,131.36:0.0,0.0:0.0,9.63939e-05,0.999903	0/0:38:1.0:3,3:3-3,3-3:24,11,0,3:3,24:2,3:215.89:326.675,113.385:0.0,0.0:0.0,1.27547e-07,1.0
+chr1	9977198	.	TTTGTTTGTTTG	.	.	.	END=9977209;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:350.953:366.612,131.36:0.0,0.0:0.0,1.5997e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:256.659:326.675,113.385:0.0,0.0:0.0,3.31841e-07,1.0
+chr1	9977219	.	TGTTTGTTTGTT	.	.	.	END=9977230;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:27,30,0,2:3,27:2,2:397.372:366.612,131.36:0.0,0.0:0.0,2.00918e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:257.592:326.675,113.385:0.0,0.0:0.0,8.22526e-08,1.0
+chr1	9978977	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9979014;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.896527:26,26:24-26,24-26:7,14,0,18:26,7:5,2|6,1|8,1|9,1|14,2|15,1|16,1|19,2|20,2|21,1|22,1|24,1|25,2:312.007:366.612,131.36:0.825531,0.825531:0.0,0.0,1.0	0/2:55:0.289981:19,29:19-19,19-32:16,16,0,21:19,16:5,4|7,2|8,2|9,1|10,1|11,3|12,1|13,1|14,1|15,1|17,2|20,1|29,1:399.795:326.675,113.385:0.0,4.91823:2.38919e-27,5.47478e-14,1.0
+chr1	9979016	.	AAAATAAAAATAAAAATA	.	.	.	END=9979033;RU=aaaata;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:22,17,0,0:3,22:NULL:246.388:366.612,131.36:0.0,0.0:0.0,2.00612e-06,1.0	0/0:48:1.0:3,3:3-3,3-3:31,15,0,2:3,31:2,2:269.157:326.675,113.385:0.0,0.0:0.0,1.91913e-09,1.0
+chr1	9980211	.	AAATAAATAAATAAAT	.	.	.	END=9980226;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999921:4,4:4-4,4-4:17,6,0,0:4,17:NULL:119.881:366.612,131.36:0.0,0.0:0.0,4.93888e-05,0.999955	0/0:31:1.00001:4,4:4-4,4-4:22,6,0,3:4,22:3,3:163.046:326.675,113.385:0.0,0.0:0.0,7.88772e-07,1.0
+chr1	9981579	.	AAATAAATAAAT	.	.	.	END=9981590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997694:3,3:3-3,3-3:12,13,0,0:3,12:NULL:166.886:366.612,131.36:0.0,0.0:4.75854e-37,0.00125553,0.998747	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:174.335:326.675,113.385:0.0,0.0:0.0,3.34348e-06,1.0
+chr1	9982246	.	ACACACACACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=9982265;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.972552:15,15:14-16,14-16:13,19,0,6:14,2|15,11:8,2|12,1|13,2|14,1:280.815:366.612,131.36:0.405095,0.405095:0.0,0.0,1.0	0/0:50:0.999953:10,10:9-10,9-10:33,12,0,5:9,5|10,26|11,2:5,1|7,2|8,1|9,1:306.31:326.675,113.385:0.242928,0.242928:7.60741e-36,3.70945e-05,0.999964
+chr1	9982521	.	TTGTTGTTGTTG	.	.	.	END=9982532;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:22,9,0,3:4,22:3,3:193.373:366.612,131.36:0.0,0.0:0.0,9.32828e-07,1.0	0/0:57:1.0:4,4:4-4,4-4:45,9,0,3:4,45:3,3:280.876:326.675,113.385:0.0,0.0:0.0,7.36941e-14,1.0
+chr1	9984525	.	GCAAGAGCAAGAGCAAGA	GCAAGA	.	.	END=9984542;RU=gcaaga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:1.00001:1,1:1-1,1-1:21,19,0,0:1,21:NULL:254.048:366.612,131.36:0.0,0.0:1.0,7.08224e-07,0.0	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:239.768:326.675,113.385:0.0,0.0:0.0,1.29823e-07,1.0
+chr1	9986540	.	TTGTTGTTGTTG	.	.	.	END=9986551;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.00001:4,4:4-4,4-4:23,27,0,3:4,23:3,3:365.923:366.612,131.36:0.0,0.0:0.0,6.35825e-07,1.0	0/0:42:1.0:4,4:4-4,4-4:26,16,0,0:4,26:NULL:243.992:326.675,113.385:0.0,0.0:0.0,1.1716e-07,1.0
+chr1	9987209	.	AATAAATAAATAAATAAATAAATA	.	.	.	END=9987232;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.981668:6,6:5-6,5-6:9,10,0,3:6,9:2,1|4,1|5,1:150.808:366.612,131.36:0.425627,0.425627:1.86629e-24,0.0108559,0.98917	0/0:29:0.99986:6,6:6-6,6-6:16,11,0,2:6,16:5,2:179.84:326.675,113.385:0.0,0.0:6.45e-43,7.34505e-05,0.999926
+chr1	9987535	.	CAAACAAACAAACAAA	.	.	.	END=9987550;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999932:4,4:4-4,4-4:17,11,0,2:4,17:3,2:181.058:366.612,131.36:0.0,0.0:0.0,3.59208e-05,0.999964	0/0:35:0.999911:4,4:4-4,4-4:16,14,0,5:4,16:3,5:226.155:326.675,113.385:0.0,0.0:0.0,4.04958e-05,0.999963
+chr1	9989590	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9989609;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999454:8,8:8-8,8-8:15,8,0,2:8,15:3,1|5,1:155.464:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:36:1.0:5,5:5-5,5-5:26,8,0,2:5,26:3,1|4,1:193.06:326.675,113.385:0.0,0.0:0.0,7.69892e-08,1.0
+chr1	9989921	.	TCATCATCATCA	.	.	.	END=9989932;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:220.703:366.612,131.36:0.0,0.0:0.0,3.39588e-07,1.0	0/0:62:1.0:4,4:4-4,4-4:43,17,0,2:4,43:3,2:346.1:326.675,113.385:0.0,0.0:0.0,4.68102e-13,1.0
+chr1	9990327	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9990360;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.790985:23,23:22-24,22-24:9,20,0,6:22,2|23,7:6,1|13,1|16,1|18,1|19,1|22,1:277.297:366.612,131.36:0.578848,0.578848:0.0,0.0,1.0	0/0:56:0.998586:17,17:16-17,16-17:19,17,0,17:16,3|17,16:4,1|7,1|8,4|9,1|10,4|12,1|13,2|14,1|16,1|17,1:373.085:326.675,113.385:0.21692,0.21692:6.86508e-27,0.0012838,0.998723
+chr1	9993008	.	AAATAAATAAAT	.	.	.	END=9993019;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999925:3,3:3-3,3-3:17,10,0,0:3,17:NULL:156.012:366.612,131.36:0.0,0.0:0.0,4.21511e-05,0.999957	0/0:21:0.999304:3,3:3-3,3-3:14,7,0,0:3,14:NULL:122.489:326.675,113.385:0.0,0.0:0.0,0.00039125,0.999613
+chr1	9996407	.	AATAAATAAATA	.	.	.	END=9996418;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.681:366.612,131.36:0.0,0.0:0.0,1.46403e-06,1.0	0/0:27:0.999931:3,3:3-3,3-3:17,10,0,0:3,17:NULL:153.515:326.675,113.385:0.0,0.0:0.0,4.14139e-05,0.999962
+chr1	9997562	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAACAAACAAA	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.931239:8,8:7-9,7-9:7,23,0,7:8,7:3,1|4,2|6,1|7,3:290.899:366.612,131.36:0.762826,0.762826:0.961227,0.0388423,1.67923e-15	.
+chr1	9997609	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.946889:8,8:6-8,6-8:8,20,0,0:8,8:NULL:217.425:366.612,131.36:0.996022,0.996022:5.08871e-18,0.0405452,0.959521	.
+chr2	2	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:37:0.99925:9,9:9-9,9-9:14,15,0,8:9,14:3,2|5,2|6,1|8,3:257.71:326.675,113.385:0.0,0.0:5.53904e-32,0.000440525,0.999561
+chr2	10	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:34:0.999453:8,8:7-9,7-9:15,15,0,2:8,15:4,1|7,1:216.15:326.675,113.385:0.370196,0.370196:1.5076e-32,0.000343545,0.999659
diff --git a/trtools/mergeSTR/tests/mydir/test_GangSTRRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_GangSTRRightFilecurrent
new file mode 120000
index 00000000..3cef0ee3
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_GangSTRRightFilecurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0/test.vcf b/trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0/test.vcf
new file mode 100644
index 00000000..85eff7a9
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0/test.vcf
@@ -0,0 +1,2723 @@
+##fileformat=VCFv4.1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0358_BXD40_TyJ_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0358_BXD40_TyJ/res_chr1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr10,length=130694993>
+##contig=<ID=chr11,length=122082543>
+##contig=<ID=chr12,length=120129022>
+##contig=<ID=chr13,length=120421639>
+##contig=<ID=chr14,length=124902244>
+##contig=<ID=chr15,length=104043685>
+##contig=<ID=chr16,length=98207768>
+##contig=<ID=chr17,length=94987271>
+##contig=<ID=chr18,length=90702639>
+##contig=<ID=chr19,length=61431566>
+##contig=<ID=chr1,length=195471971>
+##contig=<ID=chr2,length=182113224>
+##contig=<ID=chr3,length=160039680>
+##contig=<ID=chr4,length=156508116>
+##contig=<ID=chr5,length=151834684>
+##contig=<ID=chr6,length=149736546>
+##contig=<ID=chr7,length=145441459>
+##contig=<ID=chr8,length=129401213>
+##contig=<ID=chr9,length=124595110>
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
+##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
+##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
+##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
+##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
+##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
+##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
+##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
+##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
+##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
+##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
+##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	BXD196_0366	BXD40_TyJ_0358
+chr1	3004986	.	TCTGTCTGTCTG	.	.	.	END=3004997;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:0.999912:3,3:3-3,3-3:17,12,0,2:3,17:2,2:193.56:366.612,131.36:0.0,0.0:0.0,5.1188e-05,0.999949	0/0:0.888534:3,3:3-3,3-3:6,4,0,0:3,6:NULL:61.3218:326.675,113.385:0.0,0.0:4.48253e-20,0.0502949,0.949783
+chr1	3005549	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3005568;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:181.959:366.612,131.36:0.0,0.0:0.0,8.11654e-06,0.999994	0/0:0.997039:4,4:4-4,4-4:12,3,0,0:4,12:NULL:73.0332:326.675,113.385:0.0,0.0:1.26878e-38,0.00169958,0.998307
+chr1	3009351	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3009402;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:0.597778:24,24:22-24,22-24:7,10,0,10:23,2|24,5:5,1|6,2|7,1|8,3|9,1|11,1|12,1:204.961:366.612,131.36:0.647588,0.647588:0.977848,0.0221963,7.63327e-09	0/0:0.389735:26,26:24-27,24-27:4,9,0,10:26,4:4,1|5,2|6,1|9,1|12,1|16,1|19,1|22,2:180.81:326.675,113.385:1.00776,1.00776:5.15603e-05,0.319906,0.680058
+chr1	3011925	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATA,TATATATATATATATATATATATATA	.	.	END=3011970;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:0.941159:13,13:11-13,11-13:9,12,0,0:13,9:NULL:154.4:366.612,131.36:0.623055,0.623055:1.0,0.0,0.0	1/1:0.00116485:4,4:2-7,2-7:0,4,0,0:NULL:NULL:36.0216:326.675,113.385:2.01694,2.01694:0.320181,0.553256,0.12662
+chr1	3013640	.	TTTGTTTGTTTGTTTG	.	.	.	END=3013655;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976022:4,4:4-4,4-4:9,4,0,0:4,9:NULL:70.0754:326.675,113.385:0.0,0.0:1.01814e-29,0.0139402,0.986089
+chr1	3021480	.	ATGATGATGATG	.	.	.	END=3021491;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,14,0,0:4,21:NULL:202.925:326.675,113.385:0.0,0.0:0.0,5.06534e-06,0.999995
+chr1	3029298	.	AGAGAGAGAGAG	.	.	.	END=3029309;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:37,14,0,0:6,37:NULL:279.964:326.675,113.385:0.0,0.0:0.0,6.57464e-11,1.0
+chr1	3030350	.	TTTATTTATTTA	.	.	.	END=3030361;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99982:3,3:3-3,3-3:15,11,0,3:3,15:2,3:178.082:326.675,113.385:0.0,0.0:0.0,8.74391e-05,0.999917
+chr1	3034212	.	ATCTATCTATCT	.	.	.	END=3034223;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:295.256:326.675,113.385:0.0,0.0:0.0,1.88135e-07,1.0
+chr1	3045469	.	CACACACACACACACACACACACACACA	.	.	.	END=3045496;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993315:14,14:13-14,13-14:20,21,0,20:13,3|14,17:4,1|5,2|6,2|8,2|9,2|10,3|12,3|13,5:450.41:326.675,113.385:0.21692,0.21692:3.05269e-18,0.00668016,0.993338
+chr1	3050738	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=3050765;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999981:7,7:7-7,7-7:18,9,0,6:7,18:5,5|6,1:198.876:326.675,113.385:0.0,0.0:0.0,1.1874e-05,0.999987
+chr1	3050955	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3051002;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.624164:24,24:23-24,23-24:12,14,0,19:23,4|24,8:5,1|7,2|9,1|11,3|12,1|14,1|16,2|18,3|21,1|22,3|23,1:336.158:326.675,113.385:0.437216,0.437216:1.08153e-07,0.371064,0.628986
+chr1	3051394	.	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	.	.	END=3051533;RU=tttttgg;PERIOD=7;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.735437:6,24:5-14,21-31:6,13,7,34:5,2|6,2|11,2:3,6|4,1|5,6|6,3|7,1|8,2|9,3|10,1|12,2|13,2|14,3|15,1|16,3:567.888:326.675,113.385:2.62352,2.31001:0.0,1.0,0.0
+chr1	3062124	.	ATACATACATACATACATACATACATACATACATACATACATAC	.	.	.	END=3062167;RU=atac;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:11,11:11-11,11-11:33,10,0,24:11,33:2,1|3,2|4,5|5,3|7,5|8,2|9,3|10,3:408.226:326.675,113.385:0.0,0.0:0.0,7.09676e-10,1.0
+chr1	3063324	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	.	.	.	END=3063367;RU=attt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:11,11:3-11,3-11:18,18,0,11:11,18:4,1|5,1|6,1|7,3|8,3|10,2:326.395:326.675,113.385:3.17431,3.17431:3.81225e-40,2.08506e-05,0.999979
+chr1	3068357	.	TGTGTGTGTGTG	.	.	.	END=3068368;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:34,16,0,4:6,34:5,4:310.554:326.675,113.385:0.0,0.0:0.0,2.88506e-10,1.0
+chr1	3072369	.	TTTATTTATTTA	.	.	.	END=3072380;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,14,0,3:3,38:2,3:300.933:326.675,113.385:0.0,0.0:0.0,9.70525e-12,1.0
+chr1	3072798	.	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=3072822;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,24,0,9:5,24:3,6|4,3:383.48:326.675,113.385:0.0,0.0:0.0,2.30288e-07,1.0
+chr1	3074617	.	GAAAGAAAGAAA	.	.	.	END=3074628;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:290.927:326.675,113.385:0.0,0.0:0.0,9.75116e-13,1.0
+chr1	3074661	.	CATGCATGCATGCATG	.	.	.	END=3074676;RU=catg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:34,11,0,0:4,34:NULL:240.772:326.675,113.385:0.0,0.0:0.0,6.64784e-10,1.0
+chr1	3078669	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3078700;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.398947:16,19:16-16,4-19:31,19,0,18:15,4|16,25|17,2:6,2|7,1|8,2|9,4|12,2|13,1|14,3|15,1|18,1|19,1:487.907:326.675,113.385:0.0,5.6364:6.95224e-32,1.39769e-10,1.0
+chr1	3079448	.	TAAATAAATAAA	.	.	.	END=3079459;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,25,0,0:3,34:NULL:363.805:326.675,113.385:0.0,0.0:0.0,9.55245e-10,1.0
+chr1	3079495	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	.	END=3079545;RU=aag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:17,17:17-17,17-17:17,25,0,20:17,17:4,1|6,1|7,1|9,1|10,5|11,2|12,2|13,2|14,1|15,1|16,3:456.172:326.675,113.385:0.220506,0.220506:3.04352e-34,3.54294e-05,0.999964
+chr1	3083387	.	TGACTTGACTTGACT	.	.	.	END=3083401;RU=tgact;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,13,0,3:3,34:2,3:273.285:326.675,113.385:0.0,0.0:0.0,2.83012e-10,1.0
+chr1	3086726	.	ACCCACCCACCC	.	.	.	END=3086737;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,47,0,7:3,19:2,7:542.298:326.675,113.385:0.0,0.0:0.0,1.27627e-05,0.999987
+chr1	3086953	.	AACAACAACAACAAC	.	.	.	END=3086967;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:37,31,0,6:5,37:3,1|4,5:470.789:326.675,113.385:0.0,0.0:0.0,3.12612e-11,1.0
+chr1	3087313	.	GGTTGGTTGGTT	.	.	.	END=3087324;RU=ggtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999862:3,3:3-3,3-3:16,28,0,0:3,16:NULL:319.124:326.675,113.385:0.0,0.0:0.0,0.000130932,0.999872
+chr1	3091604	.	GGGTGGGTGGGT	.	.	.	END=3091615;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999847:3,3:3-3,3-3:16,34,0,0:3,16:NULL:360.367:326.675,113.385:0.0,0.0:0.0,0.000119209,0.999881
+chr1	3095754	.	TCTCTCTCTCTC	.	.	.	END=3095765;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:27,20,0,3:6,27:5,2|6,1:315.128:326.675,113.385:0.139319,0.139319:0.0,2.1589e-08,1.0
+chr1	3095926	.	AAAATAAAATAAAATAAAAT	.	.	.	END=3095945;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:252.882:326.675,113.385:0.0,0.0:0.0,8.81486e-10,1.0
+chr1	3095965	.	CAAACAAACAAA	.	.	.	END=3095976;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:33,20,0,2:3,33:2,2:321.64:326.675,113.385:0.0,0.0:0.0,4.6792e-10,1.0
+chr1	3097482	.	TTGTTGTTGTTGTTG	.	.	.	END=3097496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:33,16,0,2:5,33:3,1|4,1:299.39:326.675,113.385:0.0,0.0:0.0,6.26055e-10,1.0
+chr1	3099936	.	GGGTGGGTGGGT	.	.	.	END=3099947;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994187:3,3:3-3,3-3:10,42,0,4:3,10:2,4:444.101:326.675,113.385:0.0,0.0:2.9741e-31,0.00299531,0.997012
+chr1	3105146	.	GGAAGGAAGGAA	.	.	.	END=3105157;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:265.389:326.675,113.385:0.139319,0.139319:0.0,7.22832e-08,1.0
+chr1	3116455	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	.	END=3116512;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.0319735:29,29:26-29,26-29:0,5,0,2:NULL:14,1|27,1:63.3289:326.675,113.385:0.775065,0.775065:0.170548,0.491322,0.338258
+chr1	3120976	.	TTGTTGTTGTTG	.	.	.	END=3120987;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:45,22,0,3:4,45:3,3:402.864:326.675,113.385:0.0,0.0:0.0,1.57143e-13,1.0
+chr1	3122158	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=3122191;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999857:17,17:9-17,9-17:48,40,0,17:9,3|16,4|17,39|18,2:5,1|8,1|9,3|10,1|12,2|13,1|14,1|15,6|16,1:767.221:326.675,113.385:3.24656,3.24656:0.0,0.000144555,0.999857
+chr1	3122249	.	CAGACAGACAGA	.	.	.	END=3122260;RU=caga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:58,29,0,3:3,58:2,3:515.856:326.675,113.385:0.0,0.0:0.0,7.92967e-18,1.0
+chr1	3125367	.	AACAAACAAACAAACA	.	.	.	END=3125382;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,20,0,5:4,28:3,5:327.977:326.675,113.385:0.0,0.0:0.0,1.31461e-08,1.0
+chr1	3125745	.	TTATTATTATTATTA	.	.	.	END=3125759;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:34,16,0,7:4,2|5,32:3,1|4,6:348.986:326.675,113.385:0.169767,0.169767:0.0,1.65507e-06,1.0
+chr1	3130290	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3130337;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.28766:24,33:24-24,23-33:21,19,0,34:22,2|23,5|24,11|25,3:4,1|7,5|9,2|10,3|12,2|13,3|14,1|15,5|16,3|17,2|18,2|20,2|25,1|26,1|31,1:576.311:326.675,113.385:0.0990099,3.5386:1.17544e-25,2.47281e-10,1.0
+chr1	3131093	.	TGACTGACTGAC	.	.	.	END=3131104;RU=tgac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:46,23,0,0:3,46:NULL:387.79:326.675,113.385:0.0,0.0:0.0,1.31898e-13,1.0
+chr1	3132979	.	CTCCCTCCCTCC	.	.	.	END=3132990;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:246.583:326.675,113.385:0.0,0.0:0.0,6.02507e-09,1.0
+chr1	3134119	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3134160;RU=ttg;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:14,14:14-14,14-14:33,20,0,23:14,33:4,1|5,1|6,1|7,5|8,2|9,5|10,1|11,1|12,5|13,1:503.566:326.675,113.385:0.0,0.0:0.0,6.14385e-10,1.0
+chr1	3153384	.	AATAAATAAATA	.	.	.	END=3153395;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99958:3,3:3-3,3-3:14,8,0,3:3,14:2,3:150.528:326.675,113.385:0.0,0.0:1.58e-43,0.000173232,0.999827
+chr1	3161509	.	GGGTGGGTGGGT	.	.	.	END=3161520;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.458435:3,3:2-3,2-3:3,30,0,3:3,3:2,3:309.733:326.675,113.385:0.429525,0.429525:5.10445e-09,0.356641,0.643398
+chr1	3162873	.	TGCTGCTGCTGC	.	.	.	END=3162884;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,13,0,0:4,30:NULL:235.308:326.675,113.385:0.0,0.0:0.0,7.52117e-09,1.0
+chr1	3163213	.	ATTCTATTCTATTCT	.	.	.	END=3163227;RU=attct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999735:3,3:3-3,3-3:15,5,0,0:3,15:NULL:107.258:326.675,113.385:0.0,0.0:0.0,0.000138567,0.999864
+chr1	3164426	.	TCTTCCTCTTCCTCTTCC	.	.	.	END=3164443;RU=tcttcc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999874:3,3:3-3,3-3:15,20,0,3:3,15:2,3:272.773:326.675,113.385:0.0,0.0:0.0,0.000119291,0.999881
+chr1	3164472	.	TCATCATCATCATCA	.	.	.	END=3164486;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:5,5:5-5,5-5:19,10,0,0:5,19:NULL:171.622:326.675,113.385:0.0,0.0:0.0,1.43699e-05,0.999986
+chr1	3166251	.	AAACAAACAAAC	.	.	.	END=3166262;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:185.606:326.675,113.385:0.0,0.0:0.0,1.43407e-06,1.0
+chr1	3169195	.	GTAGTAGTAGTA	.	.	.	END=3169206;RU=gta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:23,5,0,0:4,23:NULL:131.731:326.675,113.385:0.0,0.0:0.0,8.37304e-07,1.0
+chr1	3169225	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=3169258;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998848:17,17:10-17,10-17:14,6,0,8:17,14:5,1|7,1|8,1|13,2|14,1|16,2:177.981:326.675,113.385:3.49571,3.49571:7.17539e-19,0.000371304,0.999629
+chr1	3169275	.	AATAAATAAATA	.	.	.	END=3169286;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996749:3,3:3-3,3-3:11,8,0,3:3,11:2,3:136.283:326.675,113.385:0.0,0.0:5.49383e-36,0.00126031,0.998746
+chr1	3170541	.	ACAAAACAAAACAAAACAAA	.	.	.	END=3170560;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:303.202:326.675,113.385:0.0,0.0:0.0,1.04162e-07,1.0
+chr1	3180457	.	GGGTGGGTGGGT	.	.	.	END=3180468;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998747:3,3:3-3,3-3:13,26,0,0:3,13:NULL:272.37:326.675,113.385:0.0,0.0:5.06635e-39,0.000898473,0.999104
+chr1	3184125	.	ACACACACACACACACACACACACACAC	.	.	.	END=3184152;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.714594:14,14:13-14,13-14:18,5,0,15:13,5|14,13:5,1|6,2|7,5|8,2|11,3|13,2:253.613:326.675,113.385:0.458235,0.458235:1.65788e-13,0.285296,0.714708
+chr1	3184524	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=3184541;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,14,0,5:6,23:3,1|5,4:254.377:326.675,113.385:0.139319,0.139319:0.0,3.86922e-07,1.0
+chr1	3185654	.	AGAGAGAGAGAG	.	.	.	END=3185665;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,14,0,0:6,21:NULL:210.56:326.675,113.385:0.0,0.0:0.0,2.89898e-06,1.0
+chr1	3188551	.	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	.	.	.	END=3188606;RU=gcttttt;PERIOD=7;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.932444:8,8:8-8,8-8:6,15,0,18:8,6:3,6|4,4|5,2|6,2|7,2|8,2:285.442:326.675,113.385:0.0,0.0:8.04339e-25,0.0264434,0.973607
+chr1	3189480	.	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=3189527;RU=tta;PERIOD=3;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980651:16,16:15-16,15-16:9,11,0,11:16,9:4,1|5,2|8,1|9,1|10,1|12,1|13,1|14,1|15,2:228.914:326.675,113.385:0.36513,0.36513:4.46609e-12,0.00943155,0.990589
+chr1	3190239	.	TTTGTTTGTTTGTTTG	.	.	.	END=3190254;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,10,0,3:4,19:3,3:194.354:326.675,113.385:0.0,0.0:0.0,4.98852e-06,0.999995
+chr1	3192683	.	GTGTGTGTGTGTGT	.	.	.	END=3192696;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999933:7,7:7-7,7-7:17,10,0,4:7,17:5,3|6,1:188.688:326.675,113.385:0.0,0.0:2.69012e-33,3.3069e-05,0.99997
+chr1	3192934	.	TATATATATATATA	.	.	.	END=3192947;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,8,0,0:7,22:NULL:161.681:326.675,113.385:0.139319,0.139319:1.59678e-37,2.31998e-06,1.0
+chr1	3193519	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3193554;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.357509:18,28:18-22,19-29:6,24,0,20:17,2|18,4:6,2|9,3|10,4|11,2|12,1|14,1|15,1|16,1|17,1|18,2|20,1|28,1:421.12:326.675,113.385:1.11332,3.06777:6.2436e-31,8.09123e-05,0.999919
+chr1	3194182	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194229;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.309339:24,28:17-25,17-28:3,13,0,24:24,3:5,1|9,1|12,1|13,1|14,3|15,3|17,4|18,2|20,2|21,1|22,1|23,2|24,1|28,1:323.096:326.675,113.385:1.47355,2.81063:2.01499e-19,5.77486e-05,0.999942
+chr1	3194304	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194333;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.303584:15,37:15-16,19-39:15,9,0,15:14,2|15,11|16,2:5,1|8,1|9,1|10,1|11,1|16,3|17,1|18,1|19,1|21,1|22,1|35,1|37,1:292.474:326.675,113.385:0.195027,4.9142:0.0,5.51792e-15,1.0
+chr1	3198131	.	AAAAAACAAAAAACAAAAAAC	.	.	.	END=3198151;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999434:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.589:326.675,113.385:0.0,0.0:0.0,0.000348704,0.999652
+chr1	3207640	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=3207663;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985475:6,6:6-6,6-6:9,16,0,9:6,9:3,2|4,3|5,4:247.302:326.675,113.385:0.0,0.0:3.58493e-26,0.0070461,0.992971
+chr1	3209528	.	AAAAACAAAAACAAAAACAAAAAC	.	.	.	END=3209551;RU=aaaaac;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,10,0,4:4,21:2,1|3,3:203.768:326.675,113.385:0.0,0.0:0.0,1.48659e-06,1.0
+chr1	3209577	.	AACAAAACAAAACAA	.	.	.	END=3209591;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:195.055:326.675,113.385:0.0,0.0:0.0,3.04889e-07,1.0
+chr1	3212208	.	TATTTATTTATT	.	.	.	END=3212219;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999844:3,3:3-3,3-3:16,11,0,0:3,16:NULL:161.29:326.675,113.385:0.0,0.0:0.0,8.8955e-05,0.999911
+chr1	3219276	.	ATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=3219308;RU=att;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.652411:11,11:10-11,10-11:5,7,0,0:11,5:NULL:87.0853:326.675,113.385:0.486863,0.486863:2.85734e-08,0.237372,0.76265
+chr1	3224265	.	AAACAAACAAAC	.	.	.	END=3224276;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,12,0,0:3,19:NULL:180.318:326.675,113.385:0.0,0.0:0.0,1.19101e-05,0.999987
+chr1	3229231	.	AACAAAACAAAACAAAACAAAACAA	.	.	.	END=3229255;RU=aacaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999593:5,5:5-5,5-5:14,8,0,8:5,14:2,1|3,2|4,5:184.138:326.675,113.385:0.0,0.0:1.17395e-36,0.000157612,0.999843
+chr1	3230661	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3230700;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.977378:19,20:17-21,19-21:8,15,0,15:19,4|20,4:4,1|6,1|7,3|8,1|9,1|11,1|12,1|13,1|14,2|16,1|17,1|18,1:301.046:326.675,113.385:0.922547,0.601276:0.000508468,0.979059,0.0204738
+chr1	3247218	.	AAAACAAAACAAAAC	.	.	.	END=3247232;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99952:3,3:3-3,3-3:14,8,0,2:3,14:2,2:141.793:326.675,113.385:0.0,0.0:6e-45,0.000223836,0.99978
+chr1	3248425	.	TTGCTTGCTTGCTTGC	.	.	.	END=3248440;RU=ttgc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,14,0,0:4,28:NULL:236.422:326.675,113.385:0.0,0.0:0.0,3.28777e-08,1.0
+chr1	3250571	.	ACCACCACCACCACC	.	.	.	END=3250585;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:27,12,0,0:5,27:NULL:215.956:326.675,113.385:0.169767,0.169767:0.0,8.70194e-08,1.0
+chr1	3256241	.	AAACAAACAAAC	.	.	.	END=3256252;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:200.029:326.675,113.385:0.0,0.0:0.0,5.2323e-09,1.0
+chr1	3257455	.	GAAGAAGAAGAAGAA	.	.	.	END=3257469;RU=gaa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:30,8,0,0:5,30:NULL:194.078:326.675,113.385:0.0,0.0:0.0,1.01573e-08,1.0
+chr1	3263762	.	ACCCACCCACCC	.	.	.	END=3263773;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99999:3,3:3-3,3-3:18,5,0,0:3,18:NULL:118.308:326.675,113.385:0.0,0.0:0.0,1.72567e-05,0.999986
+chr1	3266661	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=3266706;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.969164:23,23:13-23,13-23:16,11,0,12:22,3|23,13:6,1|12,1|14,2|15,1|16,1|17,1|19,1|20,1|22,3:271.086:326.675,113.385:4.42132,4.42132:2.23068e-12,0.0300615,0.969994
+chr1	3266707	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3266746;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.307853:20,21:20-20,15-22:11,11,0,13:20,11:5,1|7,1|10,1|14,1|16,1|17,1|18,1|19,5|21,1:255.799:326.675,113.385:0.0,1.50169:6.83388e-24,2.67566e-08,1.0
+chr1	3283714	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=3283733;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:19,10,0,6:5,19:2,1|3,1|4,4:218.899:326.675,113.385:0.311527,0.311527:0.0,8.6473e-06,0.999994
+chr1	3284144	.	AACCAACCAACC	.	.	.	END=3284155;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999893:3,3:3-4,3-4:16,5,0,0:3,16:NULL:107.814:326.675,113.385:0.425627,0.425627:0.0,5.48176e-05,0.999948
+chr1	3284442	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3284483;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.302197:21,33:21-21,21-33:18,9,0,12:21,18:5,1|13,1|14,1|15,1|17,1|18,1|19,3|20,2|33,1:272.176:326.675,113.385:0.0,6.07264:2.65257e-24,2.95194e-07,1.0
+chr1	3284513	.	TGAATGAATGAATGAATGAATGAA	.	.	.	END=3284536;RU=tgaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:26,10,0,5:6,26:2,1|3,2|5,2:234.8:326.675,113.385:0.0,0.0:0.0,7.37534e-08,1.0
+chr1	3286188	.	CATCATCATCAT	.	.	.	END=3286199;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999774:4,4:4-4,4-4:15,11,0,2:4,15:3,2:169.069:326.675,113.385:0.0,0.0:0.0,0.000113157,0.999888
+chr1	3287342	.	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	.	.	END=3287441;RU=tctcc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0230831:12,12:5-15,5-15:0,6,0,9:NULL:5,2|7,1|9,3|10,1|11,1|12,1:120.258:326.675,113.385:4.65146,4.65146:1.0,0.0,0.0
+chr1	3287445	.	TCCCCCTCCCCCTCCCCCTCCCCC	.	.	.	END=3287468;RU=tccccc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.937132:4,4:4-4,4-4:8,8,0,0:4,8:NULL:109.373:326.675,113.385:0.29703,0.29703:6.49485e-17,0.047431,0.952645
+chr1	3287528	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	.	END=3287583;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.869864:14,14:14-15,14-15:6,7,0,10:14,6:2,1|8,3|9,2|10,1|13,3:162.679:326.675,113.385:0.45695,0.45695:3.90143e-11,0.0418628,0.958209
+chr1	3298789	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3298808;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,18,0,3:4,26:3,3:286.097:326.675,113.385:0.0,0.0:0.0,6.66746e-08,1.0
+chr1	3308941	.	AAAATAAAATAAAATAAAATAAAATAAAAT	.	.	.	END=3308970;RU=aaaat;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959181:6,6:6-6,6-6:8,6,0,0:6,8:NULL:84.4534:326.675,113.385:0.0,0.0:8.40327e-25,0.0235629,0.976482
+chr1	3309296	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	.	END=3309339;RU=ttct;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.950048:11,11:11-11,11-11:8,7,0,3:11,8:4,1|7,1|8,1:122.558:326.675,113.385:0.0,0.0:2.46773e-21,0.030773,0.969285
+chr1	3311045	.	AAGAAAAAGAAAAAGAAA	.	.	.	END=3311062;RU=aagaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,9,0,2:3,22:2,2:180.68:326.675,113.385:0.0,0.0:0.0,1.03504e-06,1.0
+chr1	3317551	.	TAAATAAATAAA	.	.	.	END=3317562;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.469645:3,3:1-3,1-3:3,5,0,0:3,3:NULL:57.5009:326.675,113.385:0.339533,0.339533:2.24631e-09,0.263676,0.736329
+chr1	3317572	.	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	TATATA	.	.	END=3317629;RU=ta;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.00090688:3,3:1-3,1-3:0,2,0,0:NULL:NULL:19.0558:326.675,113.385:0.851255,0.851255:0.262426,0.580756,0.156859
+chr1	3317629	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=3317664;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.0227178:18,18:18-18,18-18:0,1,0,0:NULL:NULL:9.12935:326.675,113.385:0.0,0.0:0.187493,0.491102,0.321513
+chr1	3318469	.	TTTTGTTTTGTTTTG	.	.	.	END=3318483;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:233.804:326.675,113.385:0.0,0.0:0.0,1.73051e-07,1.0
+chr1	3319830	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3319850;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999541:7,7:7-7,7-7:14,11,0,4:7,14:4,1|5,1|6,2:186.226:326.675,113.385:0.0,0.0:2.56804e-37,0.000211661,0.999789
+chr1	3325716	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=3325743;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.659866:14,14:14-14,14-14:5,10,0,0:14,5:NULL:112.97:326.675,113.385:0.29703,0.29703:2.65894e-06,0.2113,0.78875
+chr1	3327145	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3327194;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.289986:25,28:24-25,23-28:10,8,0,17:23,2|25,8:5,2|7,1|8,1|10,1|12,1|13,1|14,3|15,1|16,1|17,1|21,1|23,1|24,1|28,1:268.127:326.675,113.385:0.240494,2.03792:2.52992e-12,1.94684e-05,0.99998
+chr1	3327251	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	.	END=3327290;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-11,10-11:19,6,0,7:10,19:2,1|5,1|9,5:185.78:326.675,113.385:0.270063,0.270063:7.3456e-41,6.86667e-06,0.999994
+chr1	3339592	.	GAGAGAGAGAGAGAGAGAGA	.	.	.	END=3339611;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991072:10,10:10-11,10-11:11,8,0,2:10,11:5,1|7,1:134.709:326.675,113.385:0.442343,0.442343:7.4509e-22,0.00419897,0.99581
+chr1	3339980	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=3340011;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999453:8,8:8-8,8-8:14,9,0,4:8,14:5,1|6,1|7,2:163.819:326.675,113.385:0.0,0.0:1.3722e-41,0.000249176,0.999751
+chr1	3340203	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=3340226;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992594:6,6:6-6,6-6:10,10,0,4:6,10:3,2|5,2:158.865:326.675,113.385:0.0,0.0:2.79459e-24,0.00326886,0.996739
+chr1	3342039	.	CATGCATGCATG	.	.	.	END=3342050;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.955581:3,3:3-3,3-3:8,3,0,0:3,8:NULL:61.7549:326.675,113.385:0.0,0.0:8.05459e-27,0.0209154,0.979125
+chr1	3342663	.	ATAAATAAATAA	.	.	.	END=3342674;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:133.089:326.675,113.385:0.0,0.0:2.13385e-34,2.63915e-05,0.999978
+chr1	3355412	.	ATGTATGTATGT	.	.	.	END=3355423;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:278.085:326.675,113.385:0.0,0.0:0.0,6.5236e-08,1.0
+chr1	3357227	.	TTATTTATTTAT	.	.	.	END=3357238;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.327:326.675,113.385:0.0,0.0:0.0,6.20079e-07,1.0
+chr1	3360114	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=3360159;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.636893:23,23:21-24,21-24:5,12,0,17:23,5:4,1|7,1|8,1|9,1|10,1|11,1|12,2|14,3|15,1|16,2|19,1|20,1|21,1:271.022:326.675,113.385:0.905494,0.905494:7.81328e-06,0.17981,0.820249
+chr1	3361293	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=3361348;RU=ct;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.931998:28,28:27-29,27-29:8,11,0,13:28,8:5,1|12,2|15,1|16,1|18,1|19,1|21,1|24,3|25,1|27,1:244.907:326.675,113.385:0.48807,0.48807:4.27324e-11,0.032789,0.967271
+chr1	3361348	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=3361393;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979008:23,23:20-23,20-23:9,15,0,14:23,9:5,1|6,1|7,1|9,1|10,1|11,1|12,1|13,2|14,2|18,1|22,2:290.388:326.675,113.385:1.18481,1.18481:2.84686e-16,0.0140861,0.985942
+chr1	3365708	.	TTTCTTTCTTTC	.	.	.	END=3365719;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999884:3,3:3-3,3-3:16,5,0,3:3,16:2,3:132.662:326.675,113.385:0.0,0.0:1.3774e-39,4.05224e-05,0.999963
+chr1	3365944	.	TGTGTGTGTGTG	.	.	.	END=3365955;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:20,13,0,2:6,20:5,2:212.768:326.675,113.385:0.0,0.0:0.0,3.18577e-06,1.0
+chr1	3386948	.	TCTTTCTTTCTT	.	.	.	END=3386959;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999936:3,3:3-3,3-3:17,11,0,0:3,17:NULL:170.847:326.675,113.385:0.0,0.0:0.0,4.5359e-05,0.999956
+chr1	3388595	.	ACTTCACTTCACTTC	.	.	.	END=3388609;RU=acttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:232.247:326.675,113.385:0.0,0.0:0.0,1.93775e-06,1.0
+chr1	3390191	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=3390216;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999873:13,13:12-13,12-13:30,8,0,7:12,4|13,26:5,1|7,1|10,1|11,3|12,1:265.253:326.675,113.385:0.236383,0.236383:7.1e-44,0.00012746,0.999873
+chr1	3393075	.	ACACACACACACAC	.	.	.	END=3393088;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:25,19,0,2:7,25:6,2:296.677:326.675,113.385:0.0990099,0.0990099:0.0,3.55528e-07,1.0
+chr1	3395163	.	AAGAAAGAAAGA	.	.	.	END=3395174;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:18,14,0,3:3,18:2,3:217.461:326.675,113.385:0.0,0.0:0.0,9.75855e-06,0.999993
+chr1	3403481	.	TATATATATATATATATA	.	.	.	END=3403498;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.956424:9,9:8-9,8-9:9,11,0,0:9,9:NULL:138.289:326.675,113.385:0.21692,0.21692:5.35994e-12,0.0302066,0.969851
+chr1	3403725	.	ACCACCACCACC	.	.	.	END=3403736;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:33,15,0,0:4,33:NULL:271.867:326.675,113.385:0.0,0.0:0.0,1.89479e-09,1.0
+chr1	3405593	.	TATTTATTTATT	.	.	.	END=3405604;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999792:3,3:3-3,3-3:15,6,0,2:3,15:2,2:129.67:326.675,113.385:0.0,0.0:0.0,8.11512e-05,0.999919
+chr1	3405717	.	AACAACAACAAC	.	.	.	END=3405728;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999896:4,4:4-4,4-4:16,12,0,4:4,16:3,4:203.848:326.675,113.385:0.0,0.0:0.0,5.05573e-05,0.999949
+chr1	3407095	.	AAAATAAAATAAAAT	.	.	.	END=3407109;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,14,0,2:3,27:2,2:251.859:326.675,113.385:0.0,0.0:0.0,3.11129e-08,1.0
+chr1	3408522	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	.	END=3408561;RU=gaaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.824507:10,10:9-10,9-10:14,19,0,8:9,2|10,12:7,1|8,2|9,5:296.651:326.675,113.385:0.469019,0.469019:6.06932e-23,0.175327,0.824741
+chr1	3408702	.	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3408745;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99681:22,22:22-23,22-23:13,11,0,15:22,13:4,1|6,1|7,1|8,1|9,3|12,1|14,1|15,2|16,2|19,1|21,1:274.457:326.675,113.385:0.284901,0.284901:2.11754e-16,0.000787401,0.999217
+chr1	3412976	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3413019;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.371156:22,24:21-24,21-24:4,17,0,15:21,2|22,2:6,1|7,1|9,1|11,2|12,1|13,1|15,1|16,1|19,1|21,2|22,2|24,1:301.446:326.675,113.385:0.661813,1.29601:9.28366e-23,0.0855846,0.914515
+chr1	3413022	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3413083;RU=tc;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.663264:29,31:29-31,30-31:8,16,0,6:29,3|30,2|31,3:5,1|10,1|14,1|23,1|26,1|31,1:243.069:326.675,113.385:0.638134,0.284901:1.47557e-10,0.955712,0.0443579
+chr1	3413143	.	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3413186;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.718486:22,22:21-22,21-22:5,13,0,9:22,5:5,1|7,1|11,2|12,1|18,1|19,1|20,1|21,1:216.602:326.675,113.385:0.442564,0.442564:1.43829e-06,0.128759,0.871339
+chr1	3415813	.	TAAATAAATAAA	.	.	.	END=3415824;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.329:326.675,113.385:0.0,0.0:0.0,2.02195e-06,1.0
+chr1	3418452	.	ATGTATGTATGT	.	.	.	END=3418463;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999963:3,3:3-3,3-3:18,9,0,0:3,18:NULL:159.97:326.675,113.385:0.0,0.0:0.0,2.95723e-05,0.999971
+chr1	3419362	.	CCTACCTACCTA	.	.	.	END=3419373;RU=ccta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:168.082:326.675,113.385:0.0,0.0:0.0,9.83807e-09,1.0
+chr1	3427014	.	TATCTATCTATC	.	.	.	END=3427025;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.991:326.675,113.385:0.0,0.0:0.0,3.03433e-07,1.0
+chr1	3437788	.	AAACAAACAAAC	.	.	.	END=3437799;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,8,0,2:3,28:2,2:198.144:326.675,113.385:0.0,0.0:0.0,8.29792e-09,1.0
+chr1	3440889	.	AATAAATAAATA	.	.	.	END=3440900;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:119.376:326.675,113.385:0.0,0.0:0.0,2.36557e-06,1.0
+chr1	3442170	.	CCACCACCACCACCA	.	.	.	END=3442184;RU=cca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993269:5,5:5-5,5-5:11,15,0,0:5,11:NULL:183.557:326.675,113.385:0.0,0.0:4.64275e-28,0.00515572,0.994858
+chr1	3444468	.	AAGGAAGGAAGGAAGG	.	.	.	END=3444483;RU=aagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,10,0,0:4,20:NULL:165.675:326.675,113.385:0.0,0.0:0.0,9.72115e-06,0.999993
+chr1	3452271	.	TTTGTTTGTTTG	.	.	.	END=3452282;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,4,0,0:3,27:NULL:140.314:326.675,113.385:0.0,0.0:0.0,3.06181e-08,1.0
+chr1	3452589	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=3452612;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:24,12,0,0:4,24:NULL:204.184:326.675,113.385:0.270063,0.270063:0.0,7.76877e-07,1.0
+chr1	3459217	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	.	END=3459272;RU=atct;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999734:14,14:14-14,14-14:15,29,0,23:14,15:2,2|4,2|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2|13,4:499.709:326.675,113.385:0.0,0.0:2.04347e-33,0.00020263,0.999797
+chr1	3460396	.	GGGACGGGACGGGAC	.	.	.	END=3460410;RU=gggac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990023:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6133:326.675,113.385:0.0,0.0:6.37805e-33,0.00536677,0.994647
+chr1	3462940	.	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=3462963;RU=gttt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999933:6,6:6-6,6-6:16,21,0,7:6,16:3,3|4,1|5,3:303.228:326.675,113.385:0.0,0.0:0.0,4.7846e-05,0.999955
+chr1	3470981	.	CACACACACACACACACACACACA	.	.	.	END=3471004;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997233:12,12:10-12,10-12:12,11,0,12:12,12:6,2|7,1|9,3|10,3|11,3:246.658:326.675,113.385:0.422855,0.422855:8.55909e-17,0.00120403,0.9988
+chr1	3478864	.	ACACACACACACACACAC	.	.	.	END=3478881;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.455559:9,9:8-9,8-9:12,7,0,4:8,2|9,10:6,1|8,3:155.419:326.675,113.385:0.491073,0.491073:7.61899e-16,0.543848,0.456264
+chr1	3481278	.	TTTGTTTGTTTGTTTG	.	.	.	END=3481293;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,8,0,6:4,28:3,6:224.482:326.675,113.385:0.0,0.0:0.0,8.98187e-09,1.0
+chr1	3483580	.	ACACACACACACACACACACACACACAC	.	.	.	END=3483607;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:14,14:14-14,14-14:40,15,0,12:12,3|13,4|14,31|15,2:4,1|5,1|6,4|7,1|8,1|10,1|11,1|13,2:431.313:326.675,113.385:0.19802,0.19802:1.95358e-39,5.81579e-06,0.999995
+chr1	3487177	.	CCATCCATCCAT	.	.	.	END=3487188;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:211.739:326.675,113.385:0.0,0.0:0.0,4.44959e-06,0.999995
+chr1	3487959	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=3487988;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984228:15,15:15-16,15-16:10,16,0,6:15,10:5,1|8,1|12,1|14,2|15,1:242.817:326.675,113.385:0.270063,0.270063:5.38519e-19,0.0034699,0.996541
+chr1	3487988	.	TATATATATATATATATATATATATATATATA	.	.	.	END=3488019;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.944694:16,16:15-17,15-17:9,10,0,0:16,9:NULL:136.375:326.675,113.385:0.4771,0.4771:1.98586e-11,0.0365298,0.963536
+chr1	3490427	.	GCGCGCGCGCGCGC	.	.	.	END=3490440;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:30,15,0,0:7,30:NULL:258.92:326.675,113.385:0.278639,0.278639:4.9453e-41,1.68511e-08,1.0
+chr1	3491872	.	CACACACACACA	CACACACACA	.	.	END=3491883;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.986961:5,6:5-6,6-6:7,18,0,0:5,2|6,5:NULL:198.102:326.675,113.385:0.452422,0.0:5.90355e-10,0.98821,0.0118178
+chr1	3494930	.	CATTCATTCATTCATTCATTCATT	.	.	.	END=3494953;RU=catt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,15,0,10:6,22:3,4|4,4|5,2:295.517:326.675,113.385:0.0,0.0:0.0,1.17652e-06,1.0
+chr1	3496471	.	TTCTTTTCTTTTCTT	.	.	.	END=3496485;RU=ttctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997268:3,3:1-3,1-3:12,8,0,0:3,12:NULL:120.166:326.675,113.385:0.991682,0.991682:7.039e-42,0.00157585,0.998429
+chr1	3496603	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3496632;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984143:15,15:14-16,14-16:16,6,0,6:14,3|15,13:5,1|6,1|9,1|11,2|14,1:177.115:326.675,113.385:0.281439,0.281439:8.76319e-15,0.0152588,0.984773
+chr1	3499569	.	ACCCACCCACCC	.	.	.	END=3499580;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997556:3,3:3-3,3-3:12,6,0,0:3,12:NULL:97.0083:326.675,113.385:0.0,0.0:3.21421e-31,0.00127003,0.998733
+chr1	3507557	.	ACAGACAGACAGACAGACAG	.	.	.	END=3507576;RU=acag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:5,5:5-5,5-5:17,11,0,5:5,17:3,1|4,4:205.65:326.675,113.385:0.0,0.0:1.1e-44,2.35347e-05,0.999979
+chr1	3507759	.	AACAACAACAAC	.	.	.	END=3507770;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,9,0,3:4,23:3,3:195.863:326.675,113.385:0.0,0.0:0.0,3.21403e-07,1.0
+chr1	3509243	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3509290;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.889263:24,24:24-25,24-25:10,11,0,13:23,2|24,8:5,1|7,1|8,1|10,2|13,1|16,1|18,1|19,1|22,1|23,3:253.622:326.675,113.385:0.275098,0.275098:9.72665e-08,0.0958738,0.904227
+chr1	3509605	.	AAACAAAACAAAACA	.	.	.	END=3509619;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999027:3,3:3-3,3-3:13,6,0,0:3,13:NULL:106.151:326.675,113.385:0.0,0.0:1.49e-43,0.000556877,0.999446
+chr1	3510223	.	AAATAAATAAAT	.	.	.	END=3510234;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999264:3,3:3-3,3-3:13,12,0,3:3,13:2,3:182.213:326.675,113.385:0.0,0.0:2.11445e-40,0.000337643,0.999666
+chr1	3518996	.	TATTATTATTATTATTATTATTATTATTATTATTATTAT	.	.	.	END=3519034;RU=tat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.95199:13,13:13-14,13-14:8,10,0,8:13,8:4,1|5,1|6,1|7,1|9,1|11,1|12,2:187.125:326.675,113.385:0.46122,0.46122:2.83563e-14,0.0151482,0.984883
+chr1	3519121	.	ACTCACTCACTC	.	.	.	END=3519132;RU=actc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:172.558:326.675,113.385:0.0,0.0:0.0,4.38183e-07,1.0
+chr1	3523067	.	TAATAATAATAATAATAATAATAATAA	.	.	.	END=3523093;RU=taa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.461444:9,9:9-10,9-10:20,11,0,7:9,17|10,3:5,1|6,1|7,2|8,3:250.211:326.675,113.385:0.499387,0.499387:4.041e-34,3.47245e-06,1.0
+chr1	3527389	.	CATCCATCCATC	.	.	.	END=3527400;RU=catc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:317.531:326.675,113.385:0.0,0.0:0.0,1.12177e-10,1.0
+chr1	3529807	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	.	.	.	END=3529850;RU=aaat;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999428:11,11:11-11,11-11:14,8,0,6:11,14:3,1|5,1|7,1|9,2|10,1:177.812:326.675,113.385:0.0,0.0:4.52009e-32,0.000279724,0.999721
+chr1	3530404	.	TATTATTATTATTATTATTATTATTATTATTATTATTATTAT	.	.	.	END=3530445;RU=tat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992469:14,14:14-15,14-15:11,18,0,12:14,11:3,2|5,1|6,1|7,3|8,1|11,3|13,1:304.679:326.675,113.385:0.298675,0.298675:2.55207e-16,0.00392428,0.996088
+chr1	3537894	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=3537913;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.975432:10,10:9-11,9-11:15,8,0,4:9,2|10,13:5,1|7,1|8,1|9,1:171.686:326.675,113.385:0.43384,0.43384:2.5878e-18,0.0243184,0.975727
+chr1	3540990	.	TGTTGTTGTTGTTGT	.	.	.	END=3541004;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:31,13,0,3:5,31:4,3:261.497:326.675,113.385:0.0,0.0:0.0,1.72273e-09,1.0
+chr1	3541012	.	TTGTTTTTTGTTTTTTGTTTT	.	.	.	END=3541032;RU=ttgtttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:225.609:326.675,113.385:0.0,0.0:0.0,7.44215e-08,1.0
+chr1	3554787	.	GTGTGTGTGTGTGTGT	.	.	.	END=3554802;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98132:8,8:8-17,8-17:31,13,0,5:8,31:5,1|6,1|7,2|15,1:304.298:326.675,113.385:3.80811,3.80811:0.0,2.92854e-09,1.0
+chr1	3555544	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3555593;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.260705:25,27:22-25,22-27:2,8,0,10:25,2:8,1|10,2|12,1|13,1|18,1|19,1|22,1|24,1|27,1:166.814:326.675,113.385:1.14218,1.93736:2.32776e-09,0.0255083,0.974539
+chr1	3559181	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=3559216;RU=tc;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.766734:18,18:16-18,16-18:6,8,0,5:18,6:5,2|12,1|14,1|16,1:138.427:326.675,113.385:0.74567,0.74567:7.06198e-09,0.110577,0.889519
+chr1	3559217	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3559264;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.274637:24,32:24-25,24-33:4,8,0,18:24,4:5,1|7,1|9,2|11,1|12,1|14,3|16,2|19,1|20,2|22,1|23,1|25,1|32,1:237.468:326.675,113.385:0.412766,3.4929:4.38113e-20,9.92807e-07,1.0
+chr1	3559288	.	TCTCTCTCTCTC	.	.	.	END=3559299;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983739:6,6:6-16,6-16:32,4,0,2:6,32:5,1|14,1:195.327:326.675,113.385:3.76974,3.76974:0.0,1.15641e-09,1.0
+chr1	3560915	.	AAACAAACAAACAAACAAAC	.	.	.	END=3560934;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,12,0,4:5,23:4,3|5,1:230.346:326.675,113.385:0.0,0.0:0.0,2.06752e-07,1.0
+chr1	3567195	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3567244;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.573095:25,26:10-25,10-26:6,8,0,7:24,2|25,4:6,1|7,1|8,1|14,1|17,1|21,1|26,1:169.038:326.675,113.385:7.14562,7.63548:2.708e-11,0.0172721,0.982767
+chr1	3568471	.	GATGGATGGATG	.	.	.	END=3568482;RU=gatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,9,0,0:3,25:NULL:180.427:326.675,113.385:0.0,0.0:0.0,1.92562e-07,1.0
+chr1	3569699	.	GAGGAGGAGGAG	.	.	.	END=3569710;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:247.882:326.675,113.385:0.0990099,0.0990099:0.0,2.60625e-08,1.0
+chr1	3570098	.	CAAAACAAAACAAAA	.	.	.	END=3570112;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:245.567:326.675,113.385:0.0,0.0:0.0,7.38688e-08,1.0
+chr1	3570893	.	ATATCATATCATATATATCATATCATATATATCATATCATAT	.	.	.	END=3570934;RU=atatcatatcatat;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994483:3,3:3-3,3-3:11,10,0,2:3,11:2,2:148.089:326.675,113.385:0.0,0.0:7.66727e-14,0.00376926,0.99624
+chr1	3574648	.	CACACACACACACACACACACACA	.	.	.	END=3574671;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:12,12:5-12,5-12:20,21,0,5:12,20:7,1|8,1|9,2|11,1:323.513:326.675,113.385:2.41896,2.41896:2.44051e-28,1.74376e-05,0.999986
+chr1	3575668	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3575713;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.278433:23,28:23-23,22-31:14,24,0,22:22,4|23,10:4,2|5,1|7,2|8,3|9,1|10,1|11,1|12,1|13,3|14,2|15,1|18,1|19,2|28,1:485.687:326.675,113.385:0.0,3.12812:3.576e-14,0.000275774,0.999727
+chr1	3576109	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=3576152;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:11,11:11-11,11-11:24,18,0,17:11,24:3,4|5,3|6,1|7,1|8,2|9,2|10,4:388.513:326.675,113.385:0.0,0.0:1.17738e-30,7.58134e-07,1.0
+chr1	3576169	.	TAAATAAATAAATAAATAAATAAA	.	.	.	END=3576192;RU=taaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:32,18,0,6:6,32:3,2|4,1|5,3:335.677:326.675,113.385:0.0,0.0:0.0,1.09011e-09,1.0
+chr1	3576190	.	AAACAAACAAAC	.	.	.	END=3576201;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:35,14,0,0:3,35:NULL:265.705:326.675,113.385:0.0,0.0:0.0,2.63675e-10,1.0
+chr1	3576505	.	TAGTAGTAGTAGTAGTAGTAGTAGTAG	.	.	.	END=3576531;RU=tag;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:9,9:9-9,9-9:20,8,0,3:9,20:7,2|8,1:176.424:326.675,113.385:0.139319,0.139319:1.07664e-33,4.93298e-06,0.999995
+chr1	3576606	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=3576674;RU=aga;PERIOD=3;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.984391:23,24:22-25,23-25:8,12,0,8:23,4|24,4:4,1|10,1|13,1|14,1|15,2|16,1|21,1:207.178:326.675,113.385:0.691512,0.390054:2.67454e-12,0.000776178,0.999226
+chr1	3577214	.	CAATCAATCAAT	.	.	.	END=3577225;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:157.478:326.675,113.385:0.0,0.0:0.0,1.38944e-06,1.0
+chr1	3581254	.	CAAACAAACAAACAAACAAA	.	.	.	END=3581273;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99584:5,5:5-5,5-5:11,7,0,5:5,11:3,3|4,2:146.225:326.675,113.385:0.0,0.0:2.42381e-38,0.00168218,0.998322
+chr1	3585710	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3585763;RU=ac;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.294279:27,30:25-27,24-30:6,8,0,15:25,2|27,4:5,1|6,1|11,2|12,1|17,1|19,1|20,2|22,1|23,1|24,2|25,1|30,1:227.254:326.675,113.385:0.839893,2.50693:2.65437e-10,0.000150105,0.99985
+chr1	3588411	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3588450;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.545097:19,20:18-20,18-20:14,18,0,15:18,3|19,3|20,8:5,1|6,1|7,1|9,1|11,1|13,2|14,3|16,1|17,3|18,1:355.199:326.675,113.385:0.840593,0.339533:7.22038e-07,0.88835,0.111751
+chr1	3589857	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=3589900;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.776566:22,22:20-22,20-22:10,10,0,14:21,3|22,7:10,4|12,1|13,1|14,2|15,2|19,3|22,1:252.111:326.675,113.385:0.669325,0.669325:8.57183e-15,0.206472,0.793575
+chr1	3590265	.	ATATATATATATAT	.	.	.	END=3590278;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:7,7:7-7,7-7:19,12,0,0:7,19:NULL:186.993:326.675,113.385:0.0990099,0.0990099:1.38016e-34,2.74559e-05,0.999972
+chr1	3593993	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3594042;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.31823:25,34:24-25,13-34:9,16,0,17:23,2|24,2|25,5:6,2|8,2|9,1|10,1|11,1|17,2|18,1|19,3|24,3|33,1:340.608:326.675,113.385:0.469854,9.1742:2.0047e-08,0.00153837,0.998466
+chr1	3594304	.	TTTGTTTTGTTTTGT	.	.	.	END=3594318;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.331:326.675,113.385:0.0,0.0:0.0,1.13909e-05,0.999988
+chr1	3595528	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=3595547;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:3,2|4,4|5,1:263.14:326.675,113.385:0.0,0.0:0.0,2.20549e-07,1.0
+chr1	3597713	.	CCACCCACCCAC	.	.	.	END=3597724;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:33,25,0,3:3,33:2,3:380.699:326.675,113.385:0.0,0.0:0.0,3.59453e-10,1.0
+chr1	3598374	.	AGAGAGAGAGAGAG	.	.	.	END=3598387;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:7,7:6-7,6-7:19,10,0,2:7,19:4,1|6,1:177.761:326.675,113.385:0.21692,0.21692:0.0,1.1847e-05,0.999987
+chr1	3599536	.	ATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATAT	.	.	END=3599577;RU=at;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.155543:20,20:20-22,20-22:2,4,0,0:20,2:NULL:50.4491:326.675,113.385:0.906252,0.906252:0.466256,0.47373,0.060177
+chr1	3599896	.	AAACAAACAAAC	.	.	.	END=3599907;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,4:3,21:2,3|3,1:241.059:326.675,113.385:0.0,0.0:0.0,5.51798e-07,1.0
+chr1	3600086	.	ACAAACAAACAAACAAACAA	.	.	.	END=3600105;RU=acaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:28,17,0,3:5,28:4,3:294.706:326.675,113.385:0.0,0.0:0.0,9.54704e-09,1.0
+chr1	3608018	.	TTGTTTGTTTGT	.	.	.	END=3608029;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,7,0,0:3,36:NULL:206.438:326.675,113.385:0.0,0.0:0.0,1.14619e-10,1.0
+chr1	3608156	.	TTTGTTTGTTTGTTTG	.	.	.	END=3608171;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,16,0,6:4,25:3,6:283.617:326.675,113.385:0.0,0.0:0.0,9.75639e-08,1.0
+chr1	3610003	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=3610046;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999485:22,22:22-22,22-22:16,16,0,19:22,16:5,1|6,1|8,1|9,2|10,1|11,2|12,1|13,1|15,1|16,2|17,2|19,2|21,1|22,1:373.435:326.675,113.385:0.0,0.0:9.25308e-26,9.79314e-05,0.999903
+chr1	3612774	.	AAAGAAAGAAAGAAAG	.	.	.	END=3612789;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,19,0,4:4,26:3,4:315.785:326.675,113.385:0.0,0.0:0.0,7.2981e-08,1.0
+chr1	3613442	.	CTGCTGCTGCTG	.	.	.	END=3613453;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:37,17,0,0:4,37:NULL:294.658:326.675,113.385:0.0,0.0:0.0,9.79091e-11,1.0
+chr1	3630160	.	AATTAATTAATT	.	.	.	END=3630171;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:109.798:326.675,113.385:0.0,0.0:0.0,8.58725e-06,0.999994
+chr1	3631051	.	ATTAATTAATTA	.	.	.	END=3631062;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.256:326.675,113.385:0.0,0.0:0.0,5.80739e-07,1.0
+chr1	3638662	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=3638693;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:24,26,0,15:8,24:2,2|3,1|4,3|5,2|6,1|7,6:454.389:326.675,113.385:0.0,0.0:0.0,3.53291e-07,1.0
+chr1	3639042	.	AAGAAAGAAAGA	.	.	.	END=3639053;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:48,15,0,0:3,48:NULL:321.101:326.675,113.385:0.0,0.0:0.0,1.76623e-14,1.0
+chr1	3649526	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3649573;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.862321:24,24:23-24,23-24:7,9,0,12:24,7:5,1|6,1|8,1|9,1|10,1|12,1|14,1|15,1|19,3|21,1:206.345:326.675,113.385:0.253975,0.253975:3.65728e-09,0.0713484,0.928746
+chr1	3650739	.	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3650782;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.808444:22,22:19-22,19-22:17,13,0,28:21,5|22,12:4,2|5,1|7,1|8,5|9,2|10,3|13,2|14,1|16,2|17,1|18,2|19,1|20,1|21,3|22,1:426.994:326.675,113.385:0.695329,0.695329:1.83475e-18,0.191368,0.808688
+chr1	3651177	.	AAGGAAGGAAGG	.	.	.	END=3651188;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.048:326.675,113.385:0.0,0.0:0.0,7.46354e-08,1.0
+chr1	3652162	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3652195;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.752574:17,17:16-17,16-17:11,9,0,3:16,3|17,8:9,2|15,1:160.628:326.675,113.385:0.412766,0.412766:1.17992e-08,0.24142,0.758596
+chr1	3652198	.	ATGTATGTATGT	.	.	.	END=3652209;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999242:3,3:3-3,3-3:14,7,0,0:3,14:NULL:121.301:326.675,113.385:0.0,0.0:1.08e-42,0.000431677,0.999569
+chr1	3652267	.	ATTTATTTATTT	.	.	.	END=3652278;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999819:3,3:3-3,3-3:16,8,0,0:3,16:NULL:137.147:326.675,113.385:0.0,0.0:0.0,0.000102968,0.999896
+chr1	3653461	.	GTGGGTGGGTGG	.	.	.	END=3653472;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999931:3,3:3-3,3-3:17,8,0,0:3,17:NULL:136.47:326.675,113.385:0.0,0.0:0.0,3.93278e-05,0.999963
+chr1	3655005	.	ATAAATAAATAAATAAATAAATAA	.	.	.	END=3655028;RU=ataa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999:6,6:6-6,6-6:13,7,0,2:6,13:5,2:129.011:326.675,113.385:0.0,0.0:8.21165e-40,0.000428176,0.999575
+chr1	3658217	.	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3658262;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.928376:23,23:21-24,21-24:11,8,0,14:22,2|23,9:5,1|8,1|10,2|14,2|16,1|19,2|20,2|22,3:236.441:326.675,113.385:0.507951,0.507951:9.4495e-09,0.0600128,0.940076
+chr1	3658997	.	TAAAATAAAATAAAA	.	.	.	END=3659011;RU=taaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993071:3,3:3-3,3-3:10,19,0,2:3,10:2,2:238.715:326.675,113.385:0.0,0.0:7.02703e-33,0.00430459,0.995704
+chr1	3659687	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3659732;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.973781:23,23:14-23,14-23:10,17,0,20:23,10:4,1|5,1|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,2|18,1|20,1|21,1:361.452:326.675,113.385:4.1361,4.1361:2.24582e-11,0.0119948,0.988032
+chr1	3660735	.	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=3660759;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,7,0,5:5,23:3,1|4,4:194.246:326.675,113.385:0.0,0.0:0.0,3.25399e-07,1.0
+chr1	3661144	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=3661161;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:20,11,0,4:9,20:5,1|6,1|8,1|9,1:215.734:326.675,113.385:0.0,0.0:1.8807e-38,4.27597e-06,0.999995
+chr1	3667713	.	AACAAACAAACA	.	.	.	END=3667724;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:192.588:326.675,113.385:0.0,0.0:0.0,4.54549e-06,0.999995
+chr1	3671145	.	GCAGCAGCAGCAGCA	.	.	.	END=3671159;RU=gca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:21,18,0,2:5,21:3,1|4,1:268.021:326.675,113.385:0.0,0.0:0.0,4.46015e-06,0.999995
+chr1	3671658	.	GCCGCCGCCGCCGCC	.	.	.	END=3671672;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:45,33,0,2:5,45:4,2:511.722:326.675,113.385:0.0,0.0:0.0,2.72444e-13,1.0
+chr1	3672852	.	CACCACCACCAC	.	.	.	END=3672863;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.242123:4,4:1-4,1-4:2,4,0,0:4,2:NULL:41.7069:326.675,113.385:0.857222,0.857222:4.36802e-06,0.405199,0.59487
+chr1	3673065	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	.	END=3673124;RU=cttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.66215:15,15:13-15,13-15:5,10,0,5:15,5:3,1|5,1|7,1|10,1|13,1:152.866:326.675,113.385:0.404368,0.404368:4.1154e-10,0.210486,0.789562
+chr1	3673125	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3673174;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0214122:24,24:23-26,23-26:0,10,0,6:NULL:5,1|6,1|12,1|16,1|21,1|24,1:143.116:326.675,113.385:1.0234,1.0234:0.120437,0.554704,0.325002
+chr1	3677305	.	AGAGAGAGAGAG	.	.	.	END=3677316;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,10,0,2:6,24:5,2:207.0:326.675,113.385:0.0,0.0:0.0,1.97072e-07,1.0
+chr1	3679100	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=3679119;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,7,0,3:5,26:4,3:191.379:326.675,113.385:0.0,0.0:0.0,4.85084e-08,1.0
+chr1	3680409	.	TTTTGTTTTGTTTTG	.	.	.	END=3680423;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:227.682:326.675,113.385:0.0,0.0:0.0,2.28936e-07,1.0
+chr1	3681094	.	TCTATCTATCTA	.	.	.	END=3681105;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,13,0,3:3,32:2,3:264.039:326.675,113.385:0.0,0.0:0.0,8.76106e-10,1.0
+chr1	3686501	.	TATATATATATATATATATATATATATATATATATATA	.	.	.	END=3686538;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.782299:19,19:19-19,19-19:6,7,0,0:19,6:NULL:88.745:326.675,113.385:0.417958,0.417958:3.40388e-08,0.123674,0.876425
+chr1	3688514	.	AAACAAACAAACAAAC	.	.	.	END=3688529;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999821:4,4:4-4,4-4:17,12,0,0:4,17:NULL:183.456:326.675,113.385:0.0,0.0:0.0,0.00014699,0.999856
+chr1	3689585	.	GTGGGTGGGTGGGTGG	.	.	.	END=3689600;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980853:4,4:4-4,4-4:9,28,0,3:4,9:3,3:307.763:326.675,113.385:0.0,0.0:1.30993e-24,0.0128877,0.987141
+chr1	3693848	.	TCTCTGTCTCTGTCTCTG	.	.	.	END=3693865;RU=tctctg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:201.695:326.675,113.385:0.0,0.0:0.0,1.96197e-06,1.0
+chr1	3693870	.	TGTGTGTGTGTGTG	.	.	.	END=3693883;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999913:7,7:7-8,7-8:17,8,0,3:7,17:6,3:159.633:326.675,113.385:0.261581,0.261581:1.32769e-31,2.84845e-05,0.999972
+chr1	3695906	.	TTTTATTTTATTTTA	.	.	.	END=3695920;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999485:3,3:3-3,3-3:14,12,0,2:3,14:2,2:185.671:326.675,113.385:0.0,0.0:1.2918e-40,0.000265004,0.999736
+chr1	3699904	.	CTTTCTTTCTTT	.	.	.	END=3699915;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:175.035:326.675,113.385:0.0,0.0:0.0,3.71979e-07,1.0
+chr1	3700824	.	CATCATCATCAT	.	.	.	END=3700835;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:47,15,0,4:4,47:3,4:350.769:326.675,113.385:0.0,0.0:0.0,3.01842e-14,1.0
+chr1	3702280	.	AAATAAATAAAT	.	.	.	END=3702291;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.624:326.675,113.385:0.0,0.0:0.0,2.31843e-06,1.0
+chr1	3702293	.	AAATAAAATAAAATA	.	.	.	END=3702307;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:143.124:326.675,113.385:0.0,0.0:0.0,9.21183e-06,0.999993
+chr1	3708462	.	GAGAGAGAGAGAGA	.	.	.	END=3708475;RU=ga;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999898:7,7:7-7,7-7:17,7,0,3:7,17:4,1|5,1|6,1:157.139:326.675,113.385:0.0990099,0.0990099:1.44551e-31,3.82113e-05,0.999963
+chr1	3712175	.	ACACACACACACACACACACACACACAC	.	.	.	END=3712202;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.866293:14,14:13-16,13-16:15,14,0,7:13,3|14,12:6,1|7,1|9,2|10,1|12,1|13,1:256.427:326.675,113.385:0.696456,0.696456:1.35313e-13,0.133089,0.867002
+chr1	3712203	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=3712260;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.954639:29,29:24-30,24-30:11,12,0,14:28,2|29,9:5,1|6,1|7,1|13,1|14,1|15,1|16,1|18,1|19,1|20,2|21,1|24,1|29,1:276.241:326.675,113.385:1.67885,1.67885:5.44121e-18,0.0265952,0.973455
+chr1	3719601	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3719644;RU=ag;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.465736:22,25:21-22,20-25:16,11,0,11:20,5|21,3|22,8:7,1|10,2|14,2|15,2|20,1|21,1|24,1|25,1:285.322:326.675,113.385:0.358902,1.23703:2.13583e-17,1.41103e-05,0.999987
+chr1	3719848	.	CCAGCCAGCCAG	.	.	.	END=3719859;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:288.791:326.675,113.385:0.0,0.0:0.0,1.16681e-07,1.0
+chr1	3720011	.	GTGGTGGTGGTG	.	.	.	END=3720022;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,12,0,0:4,35:NULL:254.334:326.675,113.385:0.0,0.0:0.0,2.74008e-10,1.0
+chr1	3722193	.	CACCACCACCAC	.	.	.	END=3722204;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:4,4:4-4,4-4:20,16,0,0:4,20:NULL:226.869:326.675,113.385:0.0,0.0:0.0,1.35846e-05,0.999987
+chr1	3724786	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3724835;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.88837:25,27:13-26,13-27:13,28,0,22:23,2|25,8|26,3:5,1|7,3|9,1|12,2|13,2|14,1|15,2|16,1|19,2|20,1|22,1|23,1|24,3|27,1:510.895:326.675,113.385:3.432,4.39533:6.1595e-17,1.69852e-07,1.0
+chr1	3724835	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=3724868;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:17,17:8-17,8-17:27,26,0,15:17,27:4,2|5,2|7,1|8,4|9,1|13,1|14,3|15,1:469.515:326.675,113.385:2.68881,2.68881:0.0,8.94391e-08,1.0
+chr1	3726870	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	.	END=3726905;RU=cttc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.670658:9,9:9-9,9-9:5,13,0,3:9,5:3,1|6,2:160.314:326.675,113.385:0.19802,0.19802:7.56913e-10,0.260988,0.739012
+chr1	3727052	.	CCACCCACCCAC	.	.	.	END=3727063;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,9,0,4:3,31:2,3|3,1:231.54:326.675,113.385:0.0,0.0:0.0,5.74388e-10,1.0
+chr1	3727955	.	CACACACACACA	CACACA	.	.	END=3727966;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.323451:3,6:3-6,3-6:2,27,0,0:6,2:NULL:249.758:326.675,113.385:1.38061,1.03663:9.28477e-05,0.665603,0.334317
+chr1	3730566	.	ATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3730609;RU=at;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.167736:21,21:17-21,17-21:2,8,0,0:21,2:NULL:84.4048:326.675,113.385:1.1439,1.1439:0.620722,0.34227,0.0370962
+chr1	3730917	.	AAAATAAAATAAAAT	.	.	.	END=3730931;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,6,0,0:3,18:NULL:128.579:326.675,113.385:0.0,0.0:0.0,1.8288e-05,0.999985
+chr1	3732771	.	ACAAACAAACAAACAA	.	.	.	END=3732786;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:37,12,0,3:4,37:3,3:281.16:326.675,113.385:0.0,0.0:0.0,2.69868e-11,1.0
+chr1	3733827	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=3733846;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:20,18,0,4:5,20:3,1|4,3:274.694:326.675,113.385:0.0,0.0:0.0,4.27277e-06,0.999995
+chr1	3733847	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3733864;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:221.582:326.675,113.385:0.0,0.0:0.0,4.92952e-06,0.999995
+chr1	3742835	.	ACATACATACAT	.	.	.	END=3742846;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999756:3,3:3-3,3-3:15,6,0,2:3,15:2,2:128.457:326.675,113.385:0.0,0.0:0.0,0.000104244,0.999896
+chr1	3744407	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=3744462;RU=ggaa;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994739:14,14:14-14,14-14:11,13,0,11:14,11:3,1|4,2|5,1|7,2|8,2|11,1|12,2:247.076:326.675,113.385:0.0,0.0:3.08675e-25,0.00330763,0.996701
+chr1	3745050	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=3745103;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.811515:27,27:23-27,23-27:6,13,0,7:27,6:11,1|17,2|19,1|23,1|26,2:200.791:326.675,113.385:1.59366,1.59366:2.83126e-07,0.0964777,0.903624
+chr1	3752086	.	GTGTGTGTGTGT	.	.	.	END=3752097;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,15,0,2:6,21:5,2:235.47:326.675,113.385:0.139319,0.139319:0.0,2.68487e-06,1.0
+chr1	3758404	.	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	.	.	.	END=3758448;RU=aaaca;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99793:9,9:9-9,9-9:12,9,0,7:9,12:5,3|7,1|8,3:176.998:326.675,113.385:0.0,0.0:2.98334e-31,0.00078847,0.999217
+chr1	3765019	.	ATTTATTTATTT	.	.	.	END=3765030;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999971:3,3:3-3,3-3:18,10,0,0:3,18:NULL:156.196:326.675,113.385:0.0,0.0:0.0,2.37635e-05,0.999979
+chr1	3766121	.	ACCCACCCACCC	.	.	.	END=3766132;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981572:3,3:3-3,3-3:9,21,0,0:3,9:NULL:219.913:326.675,113.385:0.0,0.0:9.73776e-28,0.0135567,0.986474
+chr1	3774612	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3774657;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.766394:23,24:21-23,17-25:16,13,0,19:21,2|22,3|23,11:5,2|8,1|9,3|11,3|13,1|14,5|21,1|22,1|23,1|24,1:364.47:326.675,113.385:0.893506,2.31438:9.02236e-21,4.32181e-05,0.999957
+chr1	3779502	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3779519;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996225:3,3:3-3,3-3:11,10,0,2:3,11:2,2:146.011:326.675,113.385:0.0,0.0:4.10704e-36,0.00189986,0.998108
+chr1	3784264	.	TTTATTTATTTA	.	.	.	END=3784275;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:196.026:326.675,113.385:0.0,0.0:0.0,4.68302e-07,1.0
+chr1	3785257	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3785292;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999161:18,18:18-18,18-18:16,9,0,7:18,16:6,2|10,1|11,2|13,1|16,1:210.872:326.675,113.385:0.0,0.0:1.9113e-20,0.000261504,0.999742
+chr1	3786174	.	TTTATTTATTTA	.	.	.	END=3786185;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:3,3:3-3,3-3:17,9,0,0:3,17:NULL:151.107:326.675,113.385:0.0,0.0:0.0,6.01705e-05,0.999941
+chr1	3786490	.	TAAATAAATAAA	.	.	.	END=3786501;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:185.487:326.675,113.385:0.0,0.0:0.0,1.83393e-08,1.0
+chr1	3788152	.	CATACATACATA	.	.	.	END=3788163;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:18,10,0,5:3,18:2,5:200.301:326.675,113.385:0.0,0.0:0.0,1.22226e-05,0.999987
+chr1	3788588	.	CTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCC	.	.	.	END=3788627;RU=ctctctcc;PERIOD=8;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.887773:5,5:5-5,5-5:6,9,0,3:5,6:2,1|4,2:124.338:326.675,113.385:0.29703,0.29703:5.95352e-18,0.0705128,0.929582
+chr1	3789797	.	AATAAATAAATA	.	.	.	END=3789808;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999822:3,3:3-3,3-3:16,5,0,0:3,16:NULL:110.646:326.675,113.385:0.0,0.0:0.0,9.87633e-05,0.999903
+chr1	3805050	.	TTGGTTGGTTGG	.	.	.	END=3805061;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:231.613:326.675,113.385:0.0,0.0:0.0,7.69771e-08,1.0
+chr1	3805151	.	CTGCCTCTGCCTCTGCCTCTGCCT	.	.	.	END=3805174;RU=ctgcct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,12,0,3:4,25:3,3:229.306:326.675,113.385:0.0,0.0:0.0,1.29196e-07,1.0
+chr1	3805421	.	ACCCACCCACCC	.	.	.	END=3805432;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.933602:3,3:3-3,3-3:7,10,0,0:3,7:NULL:114.943:326.675,113.385:0.0,0.0:2.59369e-20,0.0362776,0.96379
+chr1	3808366	.	TTGTTTGTTTGT	.	.	.	END=3808377;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:166.117:326.675,113.385:0.0,0.0:0.0,5.45415e-06,0.999995
+chr1	3820046	.	ATACATACATAC	.	.	.	END=3820057;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998942:3,3:3-3,3-3:13,5,0,2:3,13:2,2:109.567:326.675,113.385:0.0,0.0:1.1e-44,0.000421401,0.999583
+chr1	3820489	.	GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	.	.	.	END=3820553;RU=gaaga;PERIOD=5;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.495419:13,13:11-13,11-13:3,13,0,4:13,3:6,1|11,2|12,1:162.65:326.675,113.385:0.634282,0.634282:1.54106e-06,0.353491,0.646549
+chr1	3821324	.	ATGAAATGAAATGAA	.	.	.	END=3821338;RU=atgaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:162.026:326.675,113.385:0.0,0.0:0.0,2.89903e-06,1.0
+chr1	3821877	.	AATAAATAAATA	.	.	.	END=3821888;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,6,0,0:3,18:NULL:123.511:326.675,113.385:0.0,0.0:0.0,2.01864e-05,0.99998
+chr1	3824596	.	GGGTGGGTGGGT	.	.	.	END=3824607;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985127:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.238:326.675,113.385:0.0,0.0:2.41429e-25,0.00757214,0.992446
+chr1	3830973	.	TGGCTGGCTGGC	.	.	.	END=3830984;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,22,0,3:3,38:2,3:370.915:326.675,113.385:0.0,0.0:0.0,1.51153e-11,1.0
+chr1	3835805	.	ACACACACACACACACACACACACAC	.	.	.	END=3835830;RU=ac;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990705:13,13:12-13,12-13:17,19,0,7:12,3|13,14:8,1|9,1|10,2|11,1|12,1|13,1:317.303:326.675,113.385:0.222277,0.222277:4.40569e-26,0.0089973,0.991023
+chr1	3838836	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=3838855;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99562:5,5:5-5,5-5:11,9,0,2:5,11:3,1|4,1:142.612:326.675,113.385:0.0,0.0:2.51935e-32,0.0024653,0.997541
+chr1	3842935	.	GTTTGTTTGTTTGTTT	.	.	.	END=3842950;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998957:4,4:4-4,4-4:13,5,0,3:4,13:2,3:122.152:326.675,113.385:0.0,0.0:1.62355e-39,0.000587118,0.999416
+chr1	3846941	.	ACCCACCCACCC	.	.	.	END=3846952;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98379:3,3:3-3,3-3:9,12,0,0:3,9:NULL:143.689:326.675,113.385:0.0,0.0:3.48521e-27,0.00981038,0.990209
+chr1	3856577	.	CTTGCTTGCTTGCTTGCTTGCTTG	.	.	.	END=3856600;RU=cttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,21,0,6:6,20:4,1|5,5:322.057:326.675,113.385:0.0,0.0:0.0,7.0502e-06,0.999994
+chr1	3858322	.	GGAGGGAGGGAG	.	.	.	END=3858333;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,10,0,2:3,28:2,2:214.309:326.675,113.385:0.0,0.0:0.0,1.39737e-08,1.0
+chr1	3859194	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=3859211;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:6,6:6-6,6-6:18,3,0,2:6,18:4,1|5,1:115.133:326.675,113.385:0.0,0.0:4e-45,1.38367e-05,0.999987
+chr1	3863716	.	AATAACAATAACAATAAC	.	.	.	END=3863733;RU=aataac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,15,0,4:3,21:2,4:248.811:326.675,113.385:0.0,0.0:0.0,2.85121e-06,1.0
+chr1	3869461	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=3869485;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999988:5,5:4-5,4-5:20,17,0,2:5,20:2,2:254.198:326.675,113.385:0.284901,0.284901:0.0,2.21254e-05,0.999979
+chr1	3870192	.	TAAATAAATAAA	.	.	.	END=3870203;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.939518:3,3:3-3,3-3:7,9,0,0:3,7:NULL:111.194:326.675,113.385:0.0,0.0:1.192e-24,0.0342012,0.965862
+chr1	3870234	.	AAAATAAAATAAAAT	.	.	.	END=3870248;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.945741:3,3:3-3,3-3:7,7,0,0:3,7:NULL:91.0854:326.675,113.385:0.0,0.0:1.41804e-21,0.0326951,0.967364
+chr1	3886751	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=3886794;RU=taga;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999928:11,11:11-11,11-11:17,4,0,4:11,17:3,1|5,1|9,1|10,1:141.46:326.675,113.385:0.139319,0.139319:3e-45,3.76311e-05,0.999964
+chr1	3896272	.	ACCCACCCACCC	.	.	.	END=3896283;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997375:3,3:3-3,3-3:12,34,0,0:3,12:NULL:355.046:326.675,113.385:0.0,0.0:1.21639e-35,0.00217,0.997837
+chr1	3898788	.	TAAATAAATAAA	.	.	.	END=3898799;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998845:3,3:3-3,3-3:13,9,0,0:3,13:NULL:137.994:326.675,113.385:0.0,0.0:1.90907e-39,0.000696988,0.999308
+chr1	3898809	.	ATAATAATAATA	.	.	.	END=3898820;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.843641:4,4:3-4,3-4:6,7,0,0:4,6:NULL:91.4475:326.675,113.385:0.497026,0.497026:9.08117e-17,0.0951607,0.904939
+chr1	3902855	.	AAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=3902882;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999965:7,7:7-7,7-7:18,12,0,2:7,18:5,1|6,1:195.079:326.675,113.385:0.0,0.0:0.0,2.76481e-05,0.999972
+chr1	3908575	.	TGTTTTGTTTTGTTT	.	.	.	END=3908589;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:168.466:326.675,113.385:0.0,0.0:0.0,1.73616e-06,1.0
+chr1	3911778	.	ACAGACAGACAG	.	.	.	END=3911789;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,14,0,2:3,19:2,2:218.129:326.675,113.385:0.0,0.0:0.0,1.6093e-05,0.999986
+chr1	3913472	.	CCCCACCCCCACCCCCAC	.	.	.	END=3913489;RU=ccccac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.799407:3,3:1-3,1-3:5,12,0,0:3,5:NULL:130.679:326.675,113.385:0.339533,0.339533:1.86304e-15,0.140504,0.85958
+chr1	3917711	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=3917748;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.682436:19,19:18-19,18-19:10,6,0,7:18,2|19,8:5,1|9,1|11,1|14,1|15,1|18,2:158.387:326.675,113.385:0.452422,0.452422:5.22233e-11,0.308645,0.691365
+chr1	3919065	.	TTTGTTTGTTTG	.	.	.	END=3919076;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:218.523:326.675,113.385:0.0,0.0:0.0,1.10826e-06,1.0
+chr1	3919745	.	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTT	.	.	.	END=3919794;RU=tattt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.940551:10,10:10-10,10-10:7,12,0,12:10,7:4,5|6,4|7,1|8,1|9,1:223.928:326.675,113.385:0.0,0.0:5.12712e-19,0.0354483,0.964613
+chr1	3923978	.	TATATATATATATATA	.	.	.	END=3923993;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998938:8,8:8-8,8-8:14,4,0,0:8,14:NULL:95.9206:326.675,113.385:0.0,0.0:3.50024e-20,0.000529512,0.999476
+chr1	3924698	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	END=3924742;RU=gagag;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.962867:8,8:8-8,8-8:8,8,0,3:8,8:5,1|6,1|7,1:132.604:326.675,113.385:0.0,0.0:0.985408,0.0146238,3.942e-21
+chr1	3924854	.	CTGCTGCTGCTG	.	.	.	END=3924865;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999959:4,4:4-4,4-4:18,11,0,0:4,18:NULL:175.104:326.675,113.385:0.0,0.0:0.0,4.83312e-05,0.999955
+chr1	3925698	.	AGAGAGAGAGAG	.	.	.	END=3925709;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:26,0,0,0:6,26:NULL:102.029:326.675,113.385:0.0,0.0:0.0,9.26147e-08,1.0
+chr1	3929285	.	ACACACACACACACACACACACACACAC	.	.	.	END=3929312;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.19087:14,14:14-16,14-16:24,8,0,7:14,24:7,1|8,2|10,1|11,1|13,1|16,1:245.259:326.675,113.385:0.991682,0.991682:2.33484e-36,7.62607e-08,1.0
+chr1	3932876	.	AAAACAAAACAAAAC	.	.	.	END=3932890;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:136.58:326.675,113.385:0.0,0.0:0.0,8.88413e-06,0.999994
+chr1	3936576	.	AACAAACAAACA	.	.	.	END=3936587;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999654:3,3:3-3,3-3:15,8,0,0:3,15:NULL:130.869:326.675,113.385:0.0,0.0:0.0,0.000206511,0.999796
+chr1	3943923	.	ATATATATATAT	.	.	.	END=3943934;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999959:6,6:6-6,6-6:18,10,0,0:6,18:NULL:165.23:326.675,113.385:0.0,0.0:1.10252e-32,4.65672e-05,0.999956
+chr1	3945858	.	AGAAAGAAAGAA	.	.	.	END=3945869;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99866:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.299:326.675,113.385:0.0,0.0:1.5e-44,0.00084985,0.999156
+chr1	3949566	.	ACACACACACAC	.	.	.	END=3949577;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:6,6:6-6,6-6:19,15,0,0:6,19:NULL:211.802:326.675,113.385:0.139319,0.139319:6e-45,2.42264e-05,0.999978
+chr1	3952215	.	AAACAAACAAACAAAC	.	.	.	END=3952230;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:23,15,0,5:4,23:2,1|3,4:262.927:326.675,113.385:0.169767,0.169767:0.0,5.08034e-07,1.0
+chr1	3952974	.	AGACAGACAGAC	.	.	.	END=3952985;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,4,0,2:3,21:2,2:131.297:326.675,113.385:0.0,0.0:0.0,1.24022e-06,1.0
+chr1	3955861	.	TAAATAAATAAA	.	.	.	END=3955872;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:147.329:326.675,113.385:0.0,0.0:0.0,4.77117e-07,1.0
+chr1	3956922	.	TAATAATAATAA	.	.	.	END=3956933;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,16,0,2:4,31:3,2:286.016:326.675,113.385:0.0,0.0:0.0,2.13785e-09,1.0
+chr1	3960762	.	TGATGATGATGA	.	.	.	END=3960773;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,16,0,3:4,19:3,3:240.278:326.675,113.385:0.0,0.0:0.0,8.06454e-06,0.999994
+chr1	3967310	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3967353;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.71542:21,22:19-23,21-23:8,13,0,10:21,3|22,5:6,1|11,2|12,3|15,1|17,1|18,1|21,1:236.647:326.675,113.385:1.12802,0.516942:0.000163929,0.727214,0.272628
+chr1	3969294	.	CAAACAAACAAACAAA	.	.	.	END=3969309;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995609:4,4:4-4,4-4:12,14,0,0:4,12:NULL:169.889:326.675,113.385:0.0,0.0:6.9e-43,0.00336124,0.996648
+chr1	3972539	.	TTATTTATTTATTTATTTAT	.	.	.	END=3972558;RU=ttat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999802:5,5:5-5,5-5:16,12,0,2:5,16:4,2:188.376:326.675,113.385:0.0,0.0:0.0,0.000120794,0.99988
+chr1	3985823	.	CACACACACACA	.	.	.	END=3985834;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,14,0,5:6,21:4,1|5,4:249.701:326.675,113.385:0.0,0.0:0.0,1.83576e-06,1.0
+chr1	3992697	.	GCAGAGGCAGAGGCAGAG	.	.	.	END=3992714;RU=gcagag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999906:3,3:3-3,3-3:17,11,0,0:3,17:NULL:169.069:326.675,113.385:0.0,0.0:0.0,7.31684e-05,0.999926
+chr1	3996489	.	ACACACACACACACACACACACAC	.	.	.	END=3996512;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999811:12,12:11-12,11-12:16,11,0,9:12,16:7,3|8,3|10,1|11,2:240.974:326.675,113.385:0.169767,0.169767:1.96006e-27,8.2643e-05,0.999918
+chr1	3997264	.	TTATTATTATTA	.	.	.	END=3997275;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979968:4,4:4-4,4-4:9,8,0,0:4,9:NULL:108.54:326.675,113.385:0.0,0.0:1.74558e-27,0.0128414,0.987186
+chr1	3997282	.	TTTATTTATTTA	.	.	.	END=3997293;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999445:3,3:3-3,3-3:14,5,0,0:3,14:NULL:103.056:326.675,113.385:0.0,0.0:0.0,0.00029396,0.999706
+chr1	4000875	.	ATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=4000920;RU=at;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.224362:21,21:18-21,18-21:2,2,0,0:21,2:NULL:27.9122:326.675,113.385:0.650759,0.650759:0.768271,0.231586,0.000171727
+chr1	4008030	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4008077;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.262515:24,41:24-25,24-44:10,11,0,19:23,2|24,6|25,2:4,1|6,1|7,1|11,1|13,1|14,2|16,2|17,1|18,2|19,1|21,1|22,3|23,1|41,1:316.903:326.675,113.385:0.35561,8.37565:7.71648e-11,1.76728e-05,0.999986
+chr1	4008365	.	AAGAAAGAAAGA	.	.	.	END=4008376;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.165:326.675,113.385:0.0,0.0:0.0,2.00184e-05,0.99998
+chr1	4012417	.	AAAGAAAGAAAG	.	.	.	END=4012428;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999853:3,3:3-3,3-3:16,4,0,0:3,16:NULL:98.1249:326.675,113.385:0.0,0.0:0.0,7.07918e-05,0.999933
+chr1	4014539	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4014563;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999961:5,5:5-5,5-5:18,12,0,0:5,18:NULL:178.102:326.675,113.385:0.0,0.0:0.0,4.37563e-05,0.999957
+chr1	4019418	.	TATTTATTTATT	.	.	.	END=4019429;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:183.726:326.675,113.385:0.0,0.0:0.0,9.13158e-06,0.999993
+chr1	4036362	.	CTGGAGCTGGAGCTGGAG	.	.	.	END=4036379;RU=ctggag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:33,23,0,2:3,33:2,1|3,1:350.227:326.675,113.385:0.0,0.0:0.0,3.79735e-10,1.0
+chr1	4039989	.	TTGTTGTTGTTGTTG	.	.	.	END=4040003;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99925:5,5:5-5,5-5:14,4,0,0:5,14:NULL:89.9581:326.675,113.385:0.0,0.0:2.772e-42,0.000409517,0.999591
+chr1	4042319	.	CTTCTTCTTCTT	.	.	.	END=4042330;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:131.321:326.675,113.385:0.0,0.0:0.0,1.48064e-06,1.0
+chr1	4043396	.	AGAAAAGAAAAGAAA	.	.	.	END=4043410;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998571:3,3:3-3,3-3:12,12,0,2:3,12:2,2:163.438:326.675,113.385:0.0,0.0:5.81734e-31,0.000729566,0.999272
+chr1	4043458	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4043521;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0103348:28,28:20-31,20-31:0,2,0,7:NULL:6,1|8,1|12,1|14,1|15,1|24,1|28,1:72.7319:326.675,113.385:5.03241,5.03241:0.48066,0.444317,0.0751495
+chr1	4048648	.	GAGTGAGTGAGT	.	.	.	END=4048659;RU=gagt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:304.176:326.675,113.385:0.0,0.0:0.0,1.0279e-09,1.0
+chr1	4048769	.	AATTAATTAATTAATTAATTAATT	.	.	.	END=4048792;RU=aatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998984:6,6:5-6,5-6:15,18,0,0:6,15:NULL:229.027:326.675,113.385:0.334882,0.334882:1.13576e-37,0.000935996,0.999066
+chr1	4049279	.	AAACAAACAAACAAAC	.	.	.	END=4049294;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,14,0,0:4,26:NULL:233.691:326.675,113.385:0.0,0.0:0.0,2.26657e-07,1.0
+chr1	4055341	.	ATTATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=4055376;RU=att;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:12,12:12-12,12-12:19,12,0,8:12,19:4,2|6,1|7,1|9,1|10,1|11,2:247.211:326.675,113.385:0.0,0.0:6.52832e-30,8.2327e-06,0.999994
+chr1	4056452	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4056505;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.31158:27,27:23-28,23-28:3,21,0,9:27,3:7,1|10,1|16,1|17,2|21,1|23,2|27,1:279.724:326.675,113.385:2.33668,2.33668:7.22297e-12,0.453397,0.546713
+chr1	4060377	.	AAACAAACAAACAAACAAAC	.	.	.	END=4060396;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:5,5:5-5,5-5:18,10,0,3:5,18:3,2|4,1:185.131:326.675,113.385:0.0,0.0:0.0,1.62247e-05,0.999986
+chr1	4063131	.	CACACACACACACA	.	.	.	END=4063144;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:24,14,0,0:7,24:NULL:227.233:326.675,113.385:0.0,0.0:0.0,4.36936e-07,1.0
+chr1	4065627	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4065661;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.954031:5,7:5-7,7-7:13,10,0,8:5,2|7,11:3,2|4,1|5,1|6,4:213.486:326.675,113.385:0.985733,0.0:5.22102e-30,0.954154,0.0459211
+chr1	4065673	.	AAACAAACAAACAAAC	.	.	.	END=4065688;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,6,0,0:4,21:NULL:139.16:326.675,113.385:0.0,0.0:0.0,3.96176e-06,0.999995
+chr1	4069662	.	ATTAATTAATTAATTAATTAATTA	.	.	.	END=4069685;RU=atta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.748805:6,6:6-6,6-6:5,5,0,0:6,5:NULL:66.1588:326.675,113.385:0.0,0.0:4.26125e-15,0.160237,0.839837
+chr1	4070485	.	ATATATATATATAT	.	.	.	END=4070498;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987133:7,7:7-7,7-7:10,4,0,0:7,10:NULL:76.1992:326.675,113.385:0.0,0.0:6.28506e-12,0.00772012,0.992296
+chr1	4070608	.	GTTAGTTAGTTA	.	.	.	END=4070619;RU=gtta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,5,0,2:3,31:2,2:183.313:326.675,113.385:0.0,0.0:0.0,1.47285e-09,1.0
+chr1	4086252	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=4086285;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998783:17,17:14-17,14-17:15,8,0,10:17,15:4,1|7,3|8,1|9,3|11,1|14,1:218.492:326.675,113.385:0.970701,0.970701:2.62421e-20,0.000455687,0.999546
+chr1	4088150	.	GTTTGTTTGTTTGTTTGTTT	.	.	.	END=4088169;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:34,27,0,8:5,34:2,1|4,7:447.005:326.675,113.385:0.0,0.0:0.0,3.86099e-10,1.0
+chr1	4090397	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4090442;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.726241:22,23:21-23,23-23:11,5,0,17:21,2|22,3|23,6:6,2|7,1|8,2|12,2|13,1|14,2|16,1|20,2|21,3|22,1:238.146:326.675,113.385:0.754297,0.314035:7.48832e-05,0.783309,0.216657
+chr1	4091063	.	ACAACAACAACAACA	.	.	.	END=4091077;RU=aca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,14,0,3:5,25:4,3:249.245:326.675,113.385:0.0,0.0:0.0,7.75351e-08,1.0
+chr1	4095201	.	AAGGAAGGAAGG	.	.	.	END=4095212;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999568:3,3:3-3,3-3:14,9,0,0:3,14:NULL:136.301:326.675,113.385:0.0,0.0:0.0,0.000262446,0.999742
+chr1	4095413	.	TTTGTTTGTTTGTTTG	.	.	.	END=4095428;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999912:4,4:4-4,4-4:16,11,0,6:4,16:3,6:204.035:326.675,113.385:0.0,0.0:0.0,3.98243e-05,0.999963
+chr1	4100799	.	ATTTTATTTTATTTTATTTTATTTTATTTT	.	.	.	END=4100828;RU=atttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999887:6,6:6-7,6-7:16,9,0,4:6,16:2,1|4,1|5,2:174.799:326.675,113.385:0.284901,0.284901:1.77483e-39,5.38703e-05,0.999948
+chr1	4101417	.	TGTTGTTGTTGTTGT	.	.	.	END=4101431;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999739:5,5:5-5,5-5:15,5,0,4:5,15:3,2|4,2:132.402:326.675,113.385:0.0,0.0:2.26489e-40,9.25796e-05,0.99991
+chr1	4107366	.	TATATATATATA	.	.	.	END=4107377;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:6,6:6-6,6-6:19,5,0,0:6,19:NULL:125.715:326.675,113.385:0.139319,0.139319:1.95623e-34,1.41815e-05,0.999987
+chr1	4112131	.	GCTGCTGCTGCT	.	.	.	END=4112142;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:102.343:326.675,113.385:0.0,0.0:0.0,1.31815e-05,0.999987
+chr1	4114636	.	CTATCTATCTAT	.	.	.	END=4114647;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,18,0,2:3,27:2,2:283.559:326.675,113.385:0.0,0.0:0.0,3.29652e-08,1.0
+chr1	4116064	.	CTCTCTCTCTCT	.	.	.	END=4116075;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:6,6:5-6,5-6:20,11,0,0:6,20:NULL:178.829:326.675,113.385:0.236383,0.236383:0.0,1.40272e-05,0.999987
+chr1	4119174	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=4119245;RU=aaag;PERIOD=4;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.407903:18,18:15-18,15-18:4,10,0,10:18,4:3,1|4,1|5,1|9,2|10,2|13,2|16,1:184.936:326.675,113.385:1.39643,1.39643:6.16298e-09,0.46418,0.535927
+chr1	4121252	.	TGTCTGTCTGTC	.	.	.	END=4121263;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:347.076:326.675,113.385:0.0,0.0:0.0,5.83131e-09,1.0
+chr1	4122075	.	AAATAAATAAAT	.	.	.	END=4122086;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:181.442:326.675,113.385:0.0,0.0:0.0,3.61167e-07,1.0
+chr1	4122666	.	ATCTATCTATCT	.	.	.	END=4122677;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,4:3,26:2,4:261.757:326.675,113.385:0.0,0.0:0.0,3.76513e-08,1.0
+chr1	4123576	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=4123599;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,13,0,10:6,25:2,1|3,5|4,2|5,2:286.859:326.675,113.385:0.0,0.0:0.0,9.49871e-08,1.0
+chr1	4123957	.	TCTCTCTCTCTCTC	.	.	.	END=4123970;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:27,10,0,0:7,27:NULL:209.815:326.675,113.385:0.0,0.0:9.8278e-36,1.16556e-07,1.0
+chr1	4129715	.	CTTTCTTTCTTT	.	.	.	END=4129726;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,16,0,5:3,20:2,5:263.411:326.675,113.385:0.0,0.0:0.0,3.28561e-06,1.0
+chr1	4129886	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=4129913;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:29,19,0,10:7,29:2,2|3,3|4,1|5,1|6,3:361.213:326.675,113.385:0.0,0.0:0.0,9.64579e-09,1.0
+chr1	4129930	.	TTGTTGTTGTTG	.	.	.	END=4129941;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:33,27,0,2:4,33:3,2:382.399:326.675,113.385:0.0,0.0:0.0,7.35907e-10,1.0
+chr1	4140418	.	TTTGTTTGTTTG	.	.	.	END=4140429;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:204.552:326.675,113.385:0.0,0.0:0.0,8.95016e-06,0.999994
+chr1	4140449	.	TTTGGTTTGGTTTGG	.	.	.	END=4140463;RU=tttgg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999782:3,3:3-3,3-3:15,13,0,0:3,15:NULL:180.456:326.675,113.385:0.0,0.0:0.0,0.000169065,0.999834
+chr1	4142498	.	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	.	.	.	END=4142575;RU=cag;PERIOD=3;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.673074:26,26:25-27,25-27:4,25,0,31:26,4:4,1|5,1|6,1|7,2|8,1|9,3|10,1|11,1|12,1|13,2|14,2|15,1|17,1|18,1|19,1|20,2|21,1|22,3|23,1|24,2|25,2:482.865:326.675,113.385:0.678922,0.678922:1.65866e-07,0.112299,0.887802
+chr1	4144308	.	TTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=4144334;RU=ttg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:28,12,0,8:9,28:3,2|5,1|6,1|7,3|8,1:286.039:326.675,113.385:0.0,0.0:0.0,1.41547e-08,1.0
+chr1	4144510	.	TTGTTTTGTTTTGTTTTGTT	.	.	.	END=4144529;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993702:4,4:4-6,4-6:33,17,0,3:4,33:3,2|6,1:323.727:326.675,113.385:0.81164,0.81164:0.0,9.36676e-10,1.0
+chr1	4148898	.	TTTATTTTATTTTAT	.	.	.	END=4148912;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,13,0,0:3,22:NULL:215.568:326.675,113.385:0.0,0.0:0.0,3.91503e-06,0.999995
+chr1	4153288	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=4153307;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:20,17,0,7:5,20:2,1|3,2|4,4:288.974:326.675,113.385:0.0990099,0.0990099:0.0,3.58766e-06,1.0
+chr1	4163090	.	ATTATTATTATT	.	.	.	END=4163101;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:267.259:326.675,113.385:0.0,0.0:0.0,1.23235e-07,1.0
+chr1	4168643	.	TTTATTTATTTA	.	.	.	END=4168654;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:217.241:326.675,113.385:0.0,0.0:0.0,7.03676e-06,0.999994
+chr1	4173459	.	ATTTATTTATTTATTT	.	.	.	END=4173474;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997971:4,4:4-4,4-4:12,9,0,4:4,12:3,4:159.204:326.675,113.385:0.0,0.0:3.14464e-38,0.000692925,0.99931
+chr1	4185941	.	TTTGTTTGTTTG	.	.	.	END=4185952;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:159.974:326.675,113.385:0.0,0.0:0.0,3.14951e-06,1.0
+chr1	4186148	.	TAAATAAATAAA	.	.	.	END=4186159;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:184.863:326.675,113.385:0.0,0.0:0.0,3.44099e-07,1.0
+chr1	4195196	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4195231;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.512226:18,18:17-18,17-18:16,12,0,16:17,4|18,12:5,3|6,1|7,1|11,3|13,2|14,1|15,2|16,3:312.952:326.675,113.385:0.489674,0.489674:1.30546e-13,0.487717,0.512341
+chr1	4196255	.	TTTGTTTGTTTG	.	.	.	END=4196266;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:263.701:326.675,113.385:0.0,0.0:0.0,8.27065e-09,1.0
+chr1	4199614	.	AATTAATTAATT	.	.	.	END=4199625;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990811:3,3:3-3,3-3:10,6,0,0:3,10:NULL:89.9067:326.675,113.385:0.0,0.0:5.26693e-33,0.00436205,0.99565
+chr1	4201150	.	TAAATAAATAAA	.	.	.	END=4201161;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:164.257:326.675,113.385:0.0,0.0:0.0,7.31605e-08,1.0
+chr1	4201564	.	AAACAAACAAAC	.	.	.	END=4201575;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,17,0,2:3,30:2,2:288.108:326.675,113.385:0.0,0.0:0.0,4.0014e-09,1.0
+chr1	4202537	.	AAATAAATAAAT	.	.	.	END=4202548;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,2:3,23:2,2:186.422:326.675,113.385:0.0,0.0:0.0,3.56569e-07,1.0
+chr1	4208149	.	AACAAACAAACA	.	.	.	END=4208160;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999891:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.852:326.675,113.385:0.0,0.0:0.0,6.16608e-05,0.999941
+chr1	4212306	.	AAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=4212333;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:21,9,0,0:7,21:NULL:169.604:326.675,113.385:0.0,0.0:0.0,4.44128e-06,0.999995
+chr1	4215533	.	ATACATACATACATACATACATACATACATACATAC	.	.	.	END=4215568;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993646:9,9:9-9,9-9:11,13,0,19:9,11:3,3|4,3|5,2|6,3|7,5|8,3:308.544:326.675,113.385:0.0,0.0:2.63742e-21,0.00276035,0.997246
+chr1	4216566	.	TGGGTGGGTGGG	.	.	.	END=4216577;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:41,32,0,0:3,41:NULL:443.123:326.675,113.385:0.0,0.0:0.0,3.03466e-12,1.0
+chr1	4219533	.	ACCCACCCACCC	.	.	.	END=4219544;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961038:3,3:3-3,3-3:8,22,0,0:3,8:NULL:225.816:326.675,113.385:0.0,0.0:2.78787e-23,0.0278937,0.972158
+chr1	4222234	.	TGATGATGATGA	.	.	.	END=4222245;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:20,21,0,4:4,20:3,4:302.025:326.675,113.385:0.0,0.0:0.0,3.68792e-06,1.0
+chr1	4239423	.	AAACAAACAAACAAACAAAC	.	.	.	END=4239442;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,14,0,8:5,22:2,3|3,3|4,2:271.56:326.675,113.385:0.0,0.0:0.0,6.11487e-07,1.0
+chr1	4243137	.	TCTGTCTGTCTG	.	.	.	END=4243148;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,26,0,4:3,29:2,4:378.044:326.675,113.385:0.0,0.0:0.0,7.81909e-09,1.0
+chr1	4243659	.	TTGTTGTTGTTGTTG	.	.	.	END=4243673;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:38,6,0,3:5,38:4,3:224.836:326.675,113.385:0.0990099,0.0990099:0.0,1.20459e-11,1.0
+chr1	4244758	.	AACAACAACAAC	.	.	.	END=4244769;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,15,0,3:4,27:3,3:266.465:326.675,113.385:0.0,0.0:0.0,4.53214e-08,1.0
+chr1	4247940	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4247969;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.301817:15,19:15-15,15-20:20,10,0,17:14,2|15,18:5,2|6,1|7,1|9,1|10,5|11,1|12,1|14,4|19,1:327.643:326.675,113.385:0.0,2.03272:2.09358e-25,5.07357e-06,0.999995
+chr1	4261751	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=4261794;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982188:11,11:11-11,11-11:8,7,0,12:11,8:2,1|3,1|5,3|7,2|8,1|10,2|11,2:184.845:326.675,113.385:0.0,0.0:2.19061e-33,0.00320668,0.9968
+chr1	4269351	.	AAATAAATAAAT	.	.	.	END=4269362;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:40,12,0,2:3,40:2,2:283.617:326.675,113.385:0.0,0.0:0.0,6.96112e-12,1.0
+chr1	4275434	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=4275483;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.855347:25,25:24-26,24-26:13,10,0,22:24,3|25,10:6,2|7,1|8,3|9,1|10,2|14,1|15,1|16,2|17,1|18,1|20,1|21,3|22,2|23,1:332.119:326.675,113.385:0.579017,0.579017:1.34034e-09,0.14187,0.858217
+chr1	4275539	.	ATAATAATAATA	.	.	.	END=4275550;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,7,0,0:4,26:NULL:164.927:326.675,113.385:0.0,0.0:0.0,1.25792e-07,1.0
+chr1	4281780	.	CAAACAAACAAA	.	.	.	END=4281791;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,15,0,0:3,38:NULL:284.782:326.675,113.385:0.0,0.0:0.0,2.32525e-11,1.0
+chr1	4285029	.	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	.	.	END=4285113;RU=gaagg;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.99898:10,17:5-17,17-17:5,9,0,16:10,2|17,3:3,1|4,1|5,1|6,1|10,2|11,1|12,3|13,2|15,3|16,1:234.259:326.675,113.385:3.27335,0.372309:2.04025e-06,1.0,7.76487e-37
+chr1	4285247	.	GGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGG	.	.	.	END=4285300;RU=gggaaaggggaagaaagg;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999955:3,3:3-3,3-3:17,14,0,3:3,17:2,1|3,2:222.686:326.675,113.385:0.0,0.0:4.41303e-37,5.37061e-05,0.999948
+chr1	4285317	.	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	.	.	END=4285436;RU=gaaag;PERIOD=5;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0290068:23,23:10-24,10-24:0,7,0,16:NULL:4,2|5,1|6,2|10,3|11,1|13,1|14,1|15,2|18,1|22,1|23,1:178.687:326.675,113.385:4.1875,4.1875:0.291361,0.614,0.094706
+chr1	4287727	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4287770;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.78164:20,22:20-22,22-22:8,14,0,16:20,3|22,5:5,2|8,2|9,1|10,1|11,3|13,2|16,1|18,3|21,1:296.738:326.675,113.385:0.973726,0.0990099:1.1863e-05,0.889694,0.11039
+chr1	4288691	.	TATATATATATA	.	.	.	END=4288702;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999868:6,6:6-8,6-8:17,2,0,0:6,17:NULL:89.5175:326.675,113.385:0.390054,0.390054:6.16941e-24,6.33034e-05,0.99994
+chr1	4290243	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4290302;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.994339:14,14:13-14,13-14:11,13,0,8:14,11:3,1|5,1|7,1|9,1|11,1|12,2|13,1:230.879:326.675,113.385:0.169767,0.169767:0.99755,0.00245547,3.53208e-13
+chr1	4290307	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4290346;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.727856:20,20:18-20,18-20:5,12,0,11:20,5:7,1|9,3|10,2|12,1|16,1|17,1|19,1|20,1:224.134:326.675,113.385:0.851255,0.851255:1.73201e-15,0.0946413,0.905458
+chr1	4292154	.	TGTGTGTGTGTGTG	.	.	.	END=4292167;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,11,0,0:7,22:NULL:184.467:326.675,113.385:0.139319,0.139319:4.9e-44,2.60359e-06,1.0
+chr1	4293061	.	ATTTATTTATTT	.	.	.	END=4293072;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:118.827:326.675,113.385:0.0,0.0:0.0,2.20646e-06,1.0
+chr1	4297521	.	AAATAAATAAAT	.	.	.	END=4297532;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999683:3,3:3-3,3-3:14,12,0,3:3,14:2,3:188.508:326.675,113.385:0.0,0.0:0.0,0.000159458,0.999842
+chr1	4298525	.	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	.	.	.	END=4298564;RU=aggg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.445983:10,10:8-10,8-10:3,9,0,5:10,3:3,1|6,1|7,1|8,1|9,1:135.037:326.675,113.385:0.963606,0.963606:8.30868e-05,0.335561,0.664371
+chr1	4303708	.	GTTTGTTTGTTT	.	.	.	END=4303719;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:254.878:326.675,113.385:0.0,0.0:0.0,7.89661e-10,1.0
+chr1	4304220	.	CTTCCTTCCTTC	.	.	.	END=4304231;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999578:3,3:2-3,2-3:14,21,0,2:3,14:2,2:262.18:326.675,113.385:0.46122,0.46122:0.0,0.000264883,0.999736
+chr1	4304531	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=4304562;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:8,8:8-8,8-8:22,16,0,9:8,22:3,1|4,1|5,1|6,1|7,5:308.08:326.675,113.385:0.0,0.0:0.0,7.07656e-07,1.0
+chr1	4305067	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4305100;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.728765:17,17:16-19,16-19:5,9,0,10:17,5:7,1|9,1|12,1|13,1|15,4|16,2:182.064:326.675,113.385:1.0865,1.0865:3.43413e-08,0.073556,0.926541
+chr1	4307140	.	AATAAAATAAAATAA	.	.	.	END=4307154;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:138.153:326.675,113.385:0.0,0.0:0.0,2.24604e-06,1.0
+chr1	4307673	.	TTGTTGTTGTTG	.	.	.	END=4307684;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:26,13,0,0:4,26:NULL:228.879:326.675,113.385:0.195027,0.195027:0.0,1.37826e-07,1.0
+chr1	4309252	.	TTTGTTTGTTTGTTTG	.	.	.	END=4309267;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,9,0,5:4,35:2,3|3,2:261.591:326.675,113.385:0.0,0.0:0.0,1.11506e-10,1.0
+chr1	4312047	.	AATAATAATAAT	.	.	.	END=4312058;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999633:4,4:4-4,4-4:15,8,0,0:4,15:NULL:131.449:326.675,113.385:0.0,0.0:0.0,0.000241621,0.999759
+chr1	4315806	.	TTTATTTATTTA	.	.	.	END=4315817;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961691:3,3:3-3,3-3:8,8,0,0:3,8:NULL:104.974:326.675,113.385:0.0,0.0:2.31783e-26,0.0214061,0.978636
+chr1	4318869	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	.	END=4318923;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997389:11,11:11-11,11-11:11,11,0,11:11,11:3,1|5,1|8,1|9,3|10,5:224.136:326.675,113.385:0.0,0.0:3.92039e-33,0.00105901,0.998945
+chr1	4328602	.	GTGGGTGGGTGGGTGG	.	.	.	END=4328617;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,16,0,0:4,22:NULL:233.942:326.675,113.385:0.0,0.0:0.0,4.15676e-06,0.999995
+chr1	4328704	.	ATAAATAAATAA	.	.	.	END=4328715;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:197.266:326.675,113.385:0.0,0.0:0.0,6.85972e-06,0.999994
+chr1	4329272	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=4329291;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999204:4,4:3-4,3-4:13,11,0,4:4,13:3,4:178.448:326.675,113.385:0.40582,0.40582:6.01e-43,0.000413943,0.99959
+chr1	4329605	.	GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	.	.	END=4329684;RU=ggaag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.000317116:17,17:17-17,17-17:0,1,0,0:NULL:NULL:8.30332:326.675,113.385:0.0,0.0:0.0516048,0.397132,0.551422
+chr1	4331004	.	AGAGAGAGAGAGAG	.	.	.	END=4331017;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997633:7,7:7-8,7-8:13,15,0,0:7,13:NULL:187.971:326.675,113.385:0.437216,0.437216:1.60787e-27,0.00151059,0.998496
+chr1	4331408	.	TATTATTATTATTATTAT	.	.	.	END=4331425;RU=tat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99739:6,6:6-6,6-6:12,6,0,2:6,12:3,1|5,1:120.743:326.675,113.385:0.0,0.0:3.27621e-34,0.00136058,0.998642
+chr1	4365108	.	TCTTTCTTTCTT	.	.	.	END=4365119;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,3:3,20:2,3:223.14:326.675,113.385:0.0,0.0:0.0,5.17857e-06,0.999995
+chr1	4367608	.	ACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=4367649;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.95915:21,21:11-21,11-21:14,8,0,16:20,3|21,11:10,1|12,1|13,1|14,1|16,2|17,2|19,5|20,3:271.685:326.675,113.385:4.35711,4.35711:1.72038e-11,0.0372044,0.962863
+chr1	4368385	.	CAAACAAACAAACAAA	.	.	.	END=4368400;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:211.969:326.675,113.385:0.0,0.0:0.0,2.97353e-06,1.0
+chr1	4376870	.	AAATAAAATAAAATA	.	.	.	END=4376884;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930548:3,3:3-3,3-3:7,9,0,0:3,7:NULL:110.478:326.675,113.385:0.19802,0.19802:1.82652e-23,0.0449047,0.955169
+chr1	4380706	.	ATATACTATACATATACTATACATATACTATAC	.	.	.	END=4380738;RU=atatactatac;PERIOD=11;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.922507:3,3:3-3,3-3:7,5,0,0:3,7:NULL:74.7609:326.675,113.385:0.0,0.0:1.98248e-09,0.047239,0.952838
+chr1	4381338	.	CTTTCTTTCTTT	.	.	.	END=4381349;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.07:326.675,113.385:0.0,0.0:0.0,8.56297e-08,1.0
+chr1	4383095	.	AAAATAAAATAAAATAAAAT	.	.	.	END=4383114;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999977:4,4:4-4,4-4:18,4,0,0:4,18:NULL:110.196:326.675,113.385:0.0,0.0:0.0,2.68047e-05,0.999972
+chr1	4388234	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=4388268;RU=ttttg;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99907:7,7:6-7,6-7:13,7,0,10:7,13:2,2|3,3|6,5:184.792:326.675,113.385:0.390807,0.390807:2.42909e-35,0.000341891,0.999659
+chr1	4389924	.	AAACAAACAAAC	.	.	.	END=4389935;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999743:3,3:3-3,3-3:15,11,0,0:3,15:NULL:155.687:326.675,113.385:0.0,0.0:0.0,0.000163545,0.999841
+chr1	4390516	.	GAGAAGAGAGAAGAGAGAAGA	.	.	.	END=4390536;RU=gagaaga;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:223.091:326.675,113.385:0.0,0.0:0.0,1.10314e-07,1.0
+chr1	4391542	.	TAAATAAATAAA	.	.	.	END=4391553;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:223.19:326.675,113.385:0.0,0.0:0.0,5.08592e-07,1.0
+chr1	4391556	.	AACAACAACAAC	.	.	.	END=4391567;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,14,0,4:4,19:3,4:235.756:326.675,113.385:0.0,0.0:0.0,6.8877e-06,0.999994
+chr1	4394196	.	TTTGTTTGTTTGTTTG	.	.	.	END=4394211;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:20,7,0,3:4,20:2,1|3,2:171.045:326.675,113.385:0.0,0.0:0.0,3.13178e-06,1.0
+chr1	4399750	.	GAACAGAACAGAACA	.	.	.	END=4399764;RU=gaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999941:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.316:326.675,113.385:0.0,0.0:0.0,5.14948e-05,0.999949
+chr1	4404415	.	ACCACCACCACCACC	.	.	.	END=4404429;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,11,0,2:5,22:3,1|4,1:204.569:326.675,113.385:0.0,0.0:0.0,1.20117e-06,1.0
+chr1	4413710	.	ATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATAC	.	.	.	END=4413789;RU=atagatac;PERIOD=8;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.93962:10,10:10-10,10-10:7,8,0,16:10,7:2,1|3,2|4,1|5,2|6,2|7,4|8,3|9,1:209.782:326.675,113.385:0.0,0.0:9.99768e-20,0.0315962,0.968463
+chr1	4416214	.	AGACAGACAGAC	.	.	.	END=4416225;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,21,0,3:3,20:2,3:296.935:326.675,113.385:0.0,0.0:0.0,2.77719e-06,1.0
+chr1	4417332	.	CATGCATGCATG	.	.	.	END=4417343;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,8,0,0:3,18:NULL:147.202:326.675,113.385:0.0,0.0:0.0,2.16373e-05,0.999979
+chr1	4423050	.	TAATTTAATTTAATT	.	.	.	END=4423064;RU=taatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981437:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.535:326.675,113.385:0.0,0.0:2.28684e-29,0.00902879,0.990993
+chr1	4423239	.	CACACACACACA	.	.	.	END=4423250;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:23,2,0,4:6,23:5,4:138.927:326.675,113.385:0.0,0.0:0.0,3.36608e-07,1.0
+chr1	4425083	.	CCACCACCACCACCACCA	.	.	.	END=4425100;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:29,20,0,5:6,29:5,5:334.155:326.675,113.385:0.0,0.0:0.0,6.39426e-09,1.0
+chr1	4426093	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4426130;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.283368:19,34:19-19,19-34:15,9,0,10:18,3|19,12:8,1|12,1|13,1|15,1|16,1|18,3|19,1|32,1:249.377:326.675,113.385:0.0,6.86953:1.57146e-22,1.97878e-05,0.99998
+chr1	4426860	.	AAACAAACAAAC	.	.	.	END=4426871;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999963:3,3:3-3,3-3:17,5,0,0:3,17:NULL:118.047:326.675,113.385:0.0,0.0:0.0,3.00444e-05,0.999971
+chr1	4429409	.	CCACCACCACCA	.	.	.	END=4429420;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:29,12,0,0:4,29:NULL:225.644:326.675,113.385:0.139319,0.139319:0.0,2.04925e-08,1.0
+chr1	4429719	.	GTGTGTGTGTGT	.	.	.	END=4429730;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999978:6,6:6-6,6-6:19,6,0,0:6,19:NULL:131.122:326.675,113.385:0.0,0.0:6.31465e-34,1.52283e-05,0.999986
+chr1	4429733	.	GAGAGAGAGAGAGAGAGAGA	.	.	.	END=4429752;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.955031:10,10:10-11,10-11:21,8,0,3:10,18|11,3:5,1|8,1|9,1:192.258:326.675,113.385:0.412766,0.412766:3.22241e-26,5.15855e-06,0.999995
+chr1	4430764	.	ATGAATGAATGAATGAATGAATGAATGAATGA	.	.	.	END=4430795;RU=atga;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:19,6,0,6:8,19:2,1|3,1|7,4:179.494:326.675,113.385:0.0,0.0:0.0,4.54047e-06,0.999995
+chr1	4434303	.	TATATATATATA	.	.	.	END=4434314;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.916793:6,6:5-7,5-7:7,14,0,2:6,7:5,2:175.812:326.675,113.385:0.531343,0.531343:4.91889e-09,0.0459664,0.954107
+chr1	4435269	.	CAATCAATCAAT	.	.	.	END=4435280;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999981:3,3:3-3,3-3:18,12,0,2:3,18:2,2:189.296:326.675,113.385:0.0,0.0:0.0,1.38634e-05,0.999987
+chr1	4448845	.	CTGCCTGCCTGC	.	.	.	END=4448856;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:162.143:326.675,113.385:0.0,0.0:0.0,1.34186e-06,1.0
+chr1	4449017	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	.	END=4449072;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.968477:14,14:11-15,11-15:8,18,0,19:14,8:2,1|3,3|4,1|6,3|7,1|8,2|9,2|10,1|12,2|13,3:341.121:326.675,113.385:1.35177,1.35177:1.51877e-16,0.0150207,0.985009
+chr1	4450115	.	ATATATATATAT	.	.	.	END=4450126;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997716:6,6:5-6,5-6:13,17,0,0:6,13:NULL:201.31:326.675,113.385:0.334882,0.334882:6.22094e-24,0.00170779,0.998299
+chr1	4451210	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4451261;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.887578:26,27:11-27,11-27:10,11,0,22:25,3|26,4|27,3:5,3|6,1|7,1|8,1|9,2|14,1|16,1|19,3|20,2|22,2|23,2|24,3:331.719:326.675,113.385:5.24564,6.06172:5.90559e-07,0.101421,0.898681
+chr1	4451385	.	TTGTTTTGTTTTGTT	.	.	.	END=4451399;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.192:326.675,113.385:0.0,0.0:0.0,1.28186e-05,0.999987
+chr1	4451409	.	TCTGTCTGTCTG	.	.	.	END=4451420;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:233.131:326.675,113.385:0.0,0.0:0.0,1.73914e-07,1.0
+chr1	4453062	.	GGAGGGAGGGAG	.	.	.	END=4453073;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,2:3,21:2,2:214.931:326.675,113.385:0.0,0.0:0.0,1.49998e-06,1.0
+chr1	4454884	.	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	.	.	END=4454995;RU=cctgctg;PERIOD=7;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.999114:14,19:10-16,3-21:10,21,1,24:10,3|14,3|16,4:2,2|3,3|4,1|5,1|6,1|9,1|11,2|12,2|13,1|14,5|15,4|16,1:535.961:326.675,113.385:2.21278,4.46079:0.0,1.0,2.26331e-06
+chr1	4461472	.	GAAGGGAAGGGAAGGGAAGG	.	.	.	END=4461491;RU=gaagg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,13,0,3:4,24:3,3:239.676:326.675,113.385:0.0,0.0:0.0,2.98127e-07,1.0
+chr1	4462221	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4462246;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.646146:13,13:13-17,13-17:27,12,0,8:12,2|13,23|14,2:8,1|9,2|10,2|11,1|12,1|17,1:311.76:326.675,113.385:1.82404,1.82404:2.00885e-34,2.38216e-06,1.0
+chr1	4467043	.	ATAAATAAATAA	.	.	.	END=4467054;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.454:326.675,113.385:0.0,0.0:0.0,1.14046e-05,0.999988
+chr1	4467845	.	TTGTTTGTTTGTTTGT	.	.	.	END=4467860;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99997:4,4:4-4,4-4:18,14,0,0:4,18:NULL:199.375:326.675,113.385:0.0,0.0:0.0,3.81478e-05,0.999964
+chr1	4468187	.	ATCATCATCATC	.	.	.	END=4468198;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,15,0,0:4,22:NULL:227.915:326.675,113.385:0.0,0.0:0.0,3.11186e-06,1.0
+chr1	4469245	.	CACACACACACACACACA	.	.	.	END=4469262;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:9,9:9-9,9-9:21,20,0,5:9,21:5,1|6,1|8,3:310.661:326.675,113.385:0.0,0.0:3.32615e-35,1.90036e-06,1.0
+chr1	4471019	.	AGCCAGCCAGCC	.	.	.	END=4471030;RU=agcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:224.631:326.675,113.385:0.0,0.0:0.0,6.74975e-07,1.0
+chr1	4472443	.	TGTGTGTGTGTGTG	.	.	.	END=4472456;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:23,11,0,4:7,23:5,2|6,2:226.914:326.675,113.385:0.0,0.0:0.0,3.91387e-07,1.0
+chr1	4473588	.	TTTGTTTGTTTG	.	.	.	END=4473599;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,13,0,3:3,29:2,3:253.947:326.675,113.385:0.0,0.0:0.0,6.24976e-09,1.0
+chr1	4475372	.	GTTGGTTGGTTG	.	.	.	END=4475383;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,32,0,2:3,24:2,2:399.093:326.675,113.385:0.0,0.0:0.0,6.3523e-07,1.0
+chr1	4475462	.	TGGTTGGTTGGT	.	.	.	END=4475473;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:294.213:326.675,113.385:0.0,0.0:0.0,5.04333e-06,0.999995
+chr1	4476345	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=4476384;RU=ggaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996083:10,10:10-10,10-10:11,10,0,10:10,11:2,1|5,1|7,2|9,6:209.801:326.675,113.385:0.0,0.0:2.03327e-31,0.0011957,0.998808
+chr1	4476816	.	CCCTCCCTCCCTCCCT	.	.	.	END=4476831;RU=ccct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966917:4,4:4-4,4-4:9,14,0,0:4,9:NULL:168.071:326.675,113.385:0.0,0.0:6.6534e-14,0.0255635,0.974488
+chr1	4477626	.	TAAATAAATAAA	.	.	.	END=4477637;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:197.046:326.675,113.385:0.0,0.0:0.0,1.8844e-08,1.0
+chr1	4490091	.	AACAACAACAACAACAACAAC	.	.	.	END=4490111;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999329:7,7:7-7,7-7:14,8,0,3:7,14:4,1|5,1|6,1:155.084:326.675,113.385:0.0,0.0:4.45758e-38,0.000267166,0.999735
+chr1	4491987	.	TGCTGCTGCTGC	.	.	.	END=4491998;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999976:4,4:4-4,4-4:18,11,0,0:4,18:NULL:174.657:326.675,113.385:0.0,0.0:0.0,3.28594e-05,0.99997
+chr1	4500015	.	ATAATAATAATA	.	.	.	END=4500026;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:226.75:326.675,113.385:0.0,0.0:0.0,2.00146e-06,1.0
+chr1	4500558	.	ACATACATACAT	.	.	.	END=4500569;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99975:3,3:3-3,3-3:15,10,0,0:3,15:NULL:153.146:326.675,113.385:0.0,0.0:3.50738e-38,0.000171094,0.999833
+chr1	4500614	.	AATAAATAAATA	.	.	.	END=4500625;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999519:3,3:3-3,3-3:14,11,0,0:3,14:NULL:157.545:326.675,113.385:0.0,0.0:1.93e-43,0.000309201,0.999691
+chr1	4501653	.	GTAGTAGTAGTAGTA	.	.	.	END=4501667;RU=gta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:5,5:4-5,4-5:19,10,0,2:5,19:4,2:184.127:326.675,113.385:0.195027,0.195027:0.0,1.32039e-05,0.999987
+chr1	4509810	.	TGTGTGTGTGTG	.	.	.	END=4509821;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-9,6-9:100,11,0,2:4,2|6,96|7,2:5,1|7,1:542.75:326.675,113.385:0.771007,0.771007:0.0,3.3599e-26,1.0
+chr1	4510185	.	TATTTATTTATT	.	.	.	END=4510196;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:3,3:3-3,3-3:19,17,0,0:3,19:NULL:222.763:326.675,113.385:0.0,0.0:0.0,1.3827e-05,0.999987
+chr1	4510496	.	GAAGAAGAAGAAGAAGAA	.	.	.	END=4510513;RU=gaa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,9,0,0:6,20:NULL:161.976:326.675,113.385:0.0,0.0:0.0,8.88947e-06,0.999994
+chr1	4510513	.	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	.	.	.	END=4510542;RU=agg;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99965:10,10:10-10,10-10:15,10,0,5:10,15:4,1|6,3|8,1:189.774:326.675,113.385:0.0,0.0:4e-45,0.000222649,0.999781
+chr1	4512324	.	AACAAAACAAAACAA	.	.	.	END=4512338;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998154:3,3:3-4,3-4:12,13,0,2:3,12:2,2:178.278:326.675,113.385:0.484441,0.484441:1.24142e-39,0.00100998,0.998991
+chr1	4514924	.	TTGGTTGGTTGG	.	.	.	END=4514935;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,8,0,2:3,27:2,2:196.928:326.675,113.385:0.0,0.0:0.0,2.16884e-08,1.0
+chr1	4515460	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4515507;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.584003:24,24:16-24,16-24:14,7,0,10:23,5|24,9:9,1|11,2|14,3|18,1|19,1|21,1|22,1:216.042:326.675,113.385:3.21674,3.21674:6.79599e-08,0.413248,0.586829
+chr1	4515925	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=4515960;RU=gttt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:28,19,0,15:9,28:3,2|5,1|6,2|8,10:398.289:326.675,113.385:0.0,0.0:0.0,1.04606e-08,1.0
+chr1	4517194	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4517241;RU=aata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.947807:12,12:12-12,12-12:7,12,0,10:12,7:3,1|4,1|5,1|6,2|11,5:206.508:326.675,113.385:0.0,0.0:4.58471e-16,0.0210618,0.978979
+chr1	4517464	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=4517491;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.846884:14,14:13-15,13-15:16,7,0,13:13,2|14,12|15,2:6,1|7,1|8,3|9,3|10,3|11,1|13,1:242.078:326.675,113.385:0.495247,0.495247:3.39869e-16,0.00271662,0.997291
+chr1	4519236	.	TTTTGTTTTGTTTTG	.	.	.	END=4519250;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:223.843:326.675,113.385:0.0,0.0:0.0,2.45399e-05,0.999978
+chr1	4522379	.	TTTGTTTGTTTG	.	.	.	END=4522390;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995174:3,3:3-3,3-3:11,11,0,0:3,11:NULL:142.451:326.675,113.385:0.0,0.0:1.64583e-36,0.00271403,0.997292
+chr1	4527121	.	TATATATATATATATATA	.	.	.	END=4527138;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.278082:9,9:5-9,5-9:3,1,0,0:9,3:NULL:22.0666:326.675,113.385:1.79052,1.79052:5.24669e-05,0.502426,0.497538
+chr1	4527198	.	ATATATATATATATATATAT	.	.	.	END=4527217;RU=at;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.33062:10,10:9-11,9-11:3,3,0,0:10,3:NULL:39.0087:326.675,113.385:0.741055,0.741055:5.23093e-05,0.359284,0.640709
+chr1	4528748	.	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=4528795;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9829:24,24:24-24,24-24:10,9,0,13:24,10:5,1|7,1|8,1|9,1|16,2|18,1|19,1|21,1|23,4:237.715:326.675,113.385:0.0990099,0.0990099:5.91749e-13,0.0046174,0.995394
+chr1	4529762	.	GGGTGGGTGGGT	.	.	.	END=4529773;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.865018:3,3:3-3,3-3:6,14,0,0:3,6:NULL:151.244:326.675,113.385:0.19802,0.19802:2.29599e-17,0.0763372,0.92376
+chr1	4530947	.	GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	.	.	END=4531030;RU=gagg;PERIOD=4;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0358677:9,9:7-9,7-9:0,0,0,3:NULL:7,1|8,1|9,1:21.8276:326.675,113.385:0.540307,0.540307:1.0,0.0,0.0
+chr1	4533708	.	AAACAAACAAAC	.	.	.	END=4533719;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,8,0,0:3,18:NULL:148.323:326.675,113.385:0.0,0.0:0.0,2.30936e-05,0.999979
+chr1	4536587	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4536616;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99191:15,15:14-16,14-16:22,15,0,8:13,2|14,2|15,16|16,2:5,1|7,2|9,1|11,2|13,1|14,1:313.078:326.675,113.385:0.409188,0.409188:8.50151e-21,0.00223313,0.997775
+chr1	4537486	.	CCCACCCACCCA	.	.	.	END=4537497;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,6,0,0:3,28:NULL:165.859:326.675,113.385:0.0,0.0:0.0,1.44741e-08,1.0
+chr1	4539497	.	AAAACAAAACAAAACAAAAC	.	.	.	END=4539516;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,8,0,4:4,21:2,1|3,3:181.496:326.675,113.385:0.0,0.0:0.0,1.42155e-06,1.0
+chr1	4540447	.	TTTATTTTATTTTAT	.	.	.	END=4540461;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:142.828:326.675,113.385:0.0,0.0:0.0,5.00032e-06,0.999995
+chr1	4542382	.	AAGAAAGAAAGA	.	.	.	END=4542393;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995299:3,3:3-3,3-3:11,5,0,0:3,11:NULL:86.14:326.675,113.385:0.0,0.0:1.94761e-37,0.00231251,0.997693
+chr1	4543194	.	TTATTATTATTA	.	.	.	END=4543205;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999571:4,4:4-4,4-4:15,9,0,0:4,15:NULL:145.931:326.675,113.385:0.0,0.0:3.91876e-40,0.000276912,0.999727
+chr1	4544564	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=4544591;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994105:7,7:7-7,7-7:11,10,0,3:7,11:3,2|6,1:159.312:326.675,113.385:0.0,0.0:7.66103e-37,0.00394,0.996072
+chr1	4545765	.	ACACACACACAC	.	.	.	END=4545776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:33,18,0,3:6,33:4,1|5,2:325.214:326.675,113.385:0.0,0.0:0.0,4.0991e-10,1.0
+chr1	4547787	.	AGGAGGAGGAGG	.	.	.	END=4547798;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,9,0,0:4,28:NULL:190.861:326.675,113.385:0.0,0.0:0.0,3.96374e-08,1.0
+chr1	4556934	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=4556979;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.833758:23,23:21-23,21-23:7,12,0,13:23,7:5,1|6,1|7,1|9,2|10,1|11,1|12,1|13,1|15,1|19,1|20,1|22,1:246.824:326.675,113.385:0.673849,0.673849:9.5259e-08,0.0841745,0.915921
+chr1	4566916	.	GGGTGGGTGGGT	.	.	.	END=4566927;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.760216:3,3:3-3,3-3:5,28,0,0:3,5:NULL:259.804:326.675,113.385:0.0,0.0:1.50785e-13,0.153551,0.846528
+chr1	4567644	.	GTGTGTGTGTGT	.	.	.	END=4567655;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999936:6,6:6-6,6-6:17,8,0,3:6,17:4,1|5,2:171.094:326.675,113.385:0.0,0.0:1.44138e-40,3.13488e-05,0.999971
+chr1	4569841	.	TTGTTTGTTTGT	.	.	.	END=4569852;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:191.967:326.675,113.385:0.0,0.0:0.0,5.36049e-07,1.0
+chr1	4571456	.	AAACAAACAAAC	.	.	.	END=4571467;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:240.533:326.675,113.385:0.0,0.0:0.0,9.15509e-08,1.0
+chr1	4578817	.	ATTGCATTGCATTGC	.	.	.	END=4578831;RU=attgc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:2-3,2-3:23,10,0,2:3,23:2,2:194.365:326.675,113.385:0.323567,0.323567:0.0,5.35587e-07,1.0
+chr1	4579277	.	ACACACACACACACACACACACACACACAC	.	.	.	END=4579306;RU=ac;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980888:15,15:14-16,14-16:19,14,0,9:14,3|15,14|16,2:5,1|6,1|7,2|9,1|12,1|14,3:302.927:326.675,113.385:0.441011,0.441011:1.26407e-17,0.00565926,0.994354
+chr1	4580702	.	ATTTATTTATTT	.	.	.	END=4580713;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.636:326.675,113.385:0.139319,0.139319:0.0,1.64117e-07,1.0
+chr1	4581133	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4581176;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.480372:22,22:21-22,21-22:8,13,0,19:21,3|22,5:5,3|7,1|8,1|9,1|11,1|12,1|13,4|15,1|16,1|18,1|20,2|21,1|22,1:307.642:326.675,113.385:0.492866,0.492866:1.39042e-12,0.48673,0.513336
+chr1	4581630	.	AATTAATTAATT	.	.	.	END=4581641;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.98:326.675,113.385:0.0,0.0:0.0,6.67178e-07,1.0
+chr1	4599798	.	TTTGTTTTGTTTTGT	.	.	.	END=4599812;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:3,3:3-3,3-3:17,19,0,0:3,17:NULL:237.147:326.675,113.385:0.0,0.0:0.0,6.69849e-05,0.999934
+chr1	4602828	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4602885;RU=ct;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.585198:29,29:28-30,28-30:7,10,0,4:28,2|29,5:4,1|5,1|8,1|15,1:162.432:326.675,113.385:0.659736,0.659736:1.82059e-05,0.345316,0.654699
+chr1	4603083	.	CCTCCCCTCCCCTCC	.	.	.	END=4603097;RU=cctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:3,3:3-3,3-3:19,13,0,0:3,19:NULL:188.353:326.675,113.385:0.0,0.0:0.0,1.20483e-05,0.999987
+chr1	4608057	.	GGGTGGGTGGGT	.	.	.	END=4608068;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996315:3,3:3-3,3-3:11,19,0,0:3,11:NULL:212.434:326.675,113.385:0.0,0.0:8.84134e-33,0.00266666,0.997343
+chr1	4612833	.	TATTTATTTATT	.	.	.	END=4612844;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999638:3,3:3-3,3-3:14,14,0,2:3,14:2,2:198.623:326.675,113.385:0.0,0.0:0.0,0.000219158,0.999781
+chr1	4613348	.	AAATAAATAAATAAAT	.	.	.	END=4613363;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:250.85:326.675,113.385:0.0,0.0:0.0,2.46058e-06,1.0
+chr1	4618031	.	CTCTCTCTCTCT	.	.	.	END=4618042;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:34,9,0,3:6,34:4,1|5,2:244.385:326.675,113.385:0.0,0.0:0.0,2.11434e-10,1.0
+chr1	4618737	.	GTTTGTTTGTTTGTTT	.	.	.	END=4618752;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,9,0,0:4,23:NULL:176.817:326.675,113.385:0.0,0.0:0.0,8.71602e-07,1.0
+chr1	4619846	.	ACCACCACCACC	.	.	.	END=4619857;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999638:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.883:326.675,113.385:0.0,0.0:0.0,0.000296661,0.999705
+chr1	4619861	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	.	END=4619904;RU=tcca;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987388:11,11:10-11,10-11:9,19,0,15:11,9:3,2|4,1|5,1|6,1|7,2|8,4|9,2|10,2:319.568:326.675,113.385:0.45695,0.45695:4.95012e-19,0.00840036,0.991621
+chr1	4620573	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=4620612;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.840529:20,20:19-20,19-20:21,24,0,11:19,6|20,15:6,2|9,1|10,1|11,1|12,1|15,2|16,1|19,2:414.162:326.675,113.385:0.382696,0.382696:1.23218e-12,0.15951,0.840564
+chr1	4621359	.	TTTTTTCTTTTTTCTTTTTTC	.	.	.	END=4621379;RU=ttttttc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,21,0,0:3,24:NULL:289.748:326.675,113.385:0.0,0.0:0.0,8.82954e-07,1.0
+chr1	4624755	.	AGGCAGAGGCAGAGGCAGAGGCAG	.	.	.	END=4624778;RU=aggcag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,18,0,5:4,31:3,5:319.943:326.675,113.385:0.0,0.0:0.0,2.05728e-09,1.0
+chr1	4625336	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=4625385;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.745876:25,25:24-25,24-25:6,10,0,8:25,6:11,1|15,1|16,1|17,1|20,1|23,2|24,1:182.304:326.675,113.385:0.21692,0.21692:3.33279e-08,0.0666003,0.933493
+chr1	4626527	.	TTTGTTTGTTTG	.	.	.	END=4626538;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,10,0,2:3,18:2,2:179.203:326.675,113.385:0.0,0.0:0.0,1.23552e-05,0.999987
+chr1	4626573	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=4626592;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999967:4,4:4-4,4-4:18,8,0,0:4,18:NULL:147.753:326.675,113.385:0.0,0.0:0.0,4.01851e-05,0.999963
+chr1	4626799	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4626850;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.678:24,26:23-28,26-28:12,14,0,17:23,3|24,2|25,2|26,5:6,1|7,1|10,1|11,1|12,2|14,1|15,2|16,3|17,1|18,1|22,1|24,2:328.255:326.675,113.385:1.38175,0.586754:0.000234479,0.977781,0.0220282
+chr1	4629230	.	AGAGAGAGAGAGAG	.	.	.	END=4629243;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:40,24,0,2:7,40:4,1|5,1:392.862:326.675,113.385:0.0,0.0:0.0,9.17971e-12,1.0
+chr1	4629974	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4630023;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.776363:24,25:12-25,12-25:9,23,0,10:24,4|25,5:5,1|8,1|9,1|11,1|15,1|16,2|17,1|18,1|21,1:325.245:326.675,113.385:5.93518,6.46133:0.000205716,0.786996,0.212843
+chr1	4631170	.	AAGGACAAAGGACAAAGGACA	.	.	.	END=4631190;RU=aaggaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.712:326.675,113.385:0.0,0.0:0.0,5.48697e-06,0.999995
+chr1	4637541	.	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	.	.	END=4637620;RU=aagag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.666402:15,15:7-15,7-15:4,13,0,19:15,4:4,4|6,3|7,2|8,2|10,1|12,3|13,2|14,2:271.649:326.675,113.385:3.85559,3.85559:0.86852,0.131573,2.53072e-08
+chr1	4637824	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4637855;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.641168:16,16:15-17,15-17:13,13,0,6:15,4|16,9:6,1|9,1|10,2|15,2:236.615:326.675,113.385:0.609213,0.609213:1.13819e-09,0.357257,0.64279
+chr1	4639717	.	ATTTATTTATTTATTT	.	.	.	END=4639732;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,7,0,2:4,25:3,2:184.06:326.675,113.385:0.0,0.0:0.0,1.53537e-07,1.0
+chr1	4642589	.	CTTTCTTTCTTT	.	.	.	END=4642600;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:275.826:326.675,113.385:0.0,0.0:0.0,8.98022e-07,1.0
+chr1	4643335	.	AAGGAAGGAAGG	.	.	.	END=4643346;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,17,0,3:3,29:2,3:290.615:326.675,113.385:0.0,0.0:0.0,9.02746e-09,1.0
+chr1	4648909	.	TTGTTTTGTTTTGTT	.	.	.	END=4648923;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.912248:3,3:3-3,3-3:7,16,0,0:3,7:NULL:178.273:326.675,113.385:0.0,0.0:9.71457e-23,0.070973,0.929121
+chr1	4653049	.	TTTCTTTCTTTC	.	.	.	END=4653060;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999371:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.355:326.675,113.385:0.0,0.0:0.0,0.000334464,0.999667
+chr1	4653751	.	AAAACAAAAACAAAAACA	.	.	.	END=4653768;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,16,0,2:3,18:2,2:230.727:326.675,113.385:0.0,0.0:0.0,1.67796e-05,0.999986
+chr1	4654599	.	GTTGGTTGGTTG	.	.	.	END=4654610;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999943:3,3:3-3,3-3:17,8,0,0:3,17:NULL:139.825:326.675,113.385:0.0,0.0:0.0,3.49385e-05,0.999964
+chr1	4655498	.	TGTGTGTGTGTG	.	.	.	END=4655509;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:6,6:6-6,6-6:19,16,0,0:6,19:NULL:220.995:326.675,113.385:0.0,0.0:2.6249e-41,1.50959e-05,0.999986
+chr1	4661585	.	ACAACAACAACA	.	.	.	END=4661596;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:4,4:4-4,4-4:19,9,0,0:4,19:NULL:163.593:326.675,113.385:0.0,0.0:0.0,1.5113e-05,0.999986
+chr1	4661836	.	GTGGGTGGGTGG	.	.	.	END=4661847;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:189.198:326.675,113.385:0.0,0.0:0.0,3.92993e-07,1.0
+chr1	4663912	.	AATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4663943;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992977:8,8:8-8,8-8:10,6,0,5:8,10:3,1|4,1|5,1|6,1|7,1:132.276:326.675,113.385:0.0,0.0:1.45405e-32,0.0035816,0.996428
+chr1	4664837	.	GTTTGTTTGTTTGTTT	.	.	.	END=4664852;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999068:4,4:2-4,2-4:14,15,0,0:4,14:NULL:192.754:326.675,113.385:0.997595,0.997595:4.60983e-38,0.000776317,0.999226
+chr1	4666307	.	AAACAAACAAACAAACAAAC	.	.	.	END=4666326;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,12,0,5:5,22:2,2|3,1|4,2:233.656:326.675,113.385:0.0,0.0:0.0,8.89071e-07,1.0
+chr1	4666832	.	TAAATAAATAAA	.	.	.	END=4666843;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998541:3,3:3-3,3-3:12,10,0,3:3,12:2,3:161.795:326.675,113.385:0.0,0.0:5.2568e-41,0.00054033,0.999462
+chr1	4675038	.	AAAACAAAACAAAAC	.	.	.	END=4675052;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,14,0,2:3,34:2,2:279.961:326.675,113.385:0.0,0.0:0.0,2.22486e-10,1.0
+chr1	4675154	.	ATAAATAAATAA	.	.	.	END=4675165;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,17,0,0:3,31:NULL:279.737:326.675,113.385:0.0,0.0:0.0,2.42215e-09,1.0
+chr1	4678790	.	AGTGAGTGAGTG	.	.	.	END=4678801;RU=agtg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999849:3,3:3-3,3-3:16,14,0,0:3,16:NULL:198.303:326.675,113.385:0.0,0.0:0.0,0.00010299,0.999896
+chr1	4678965	.	ACAGACAGACAG	.	.	.	END=4678976;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998838:3,3:3-3,3-3:13,9,0,0:3,13:NULL:138.47:326.675,113.385:0.0,0.0:1.0019e-41,0.000656811,0.999347
+chr1	4682367	.	TGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=4682390;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999871:8,8:8-8,8-8:16,4,0,5:8,16:3,1|6,2|7,2:137.885:326.675,113.385:0.0,0.0:4.181e-42,4.04716e-05,0.999963
+chr1	4686168	.	CACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=4686209;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.914242:21,21:20-22,20-22:8,7,0,15:21,8:5,2|6,1|7,1|9,3|10,2|13,1|14,1|15,1|16,1|17,2:218.165:326.675,113.385:0.43744,0.43744:1.32364e-09,0.0367255,0.963338
+chr1	4686524	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	.	.	.	END=4686563;RU=attt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.947364:10,10:10-10,10-10:7,12,0,10:10,7:4,1|5,5|7,1|8,1|9,2:216.363:326.675,113.385:0.0,0.0:6.04772e-18,0.0269432,0.973108
+chr1	4686877	.	CTCTTGCCTCTTGCCTCTTGC	.	.	.	END=4686897;RU=ctcttgc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:171.243:326.675,113.385:0.0,0.0:0.0,1.90551e-05,0.999985
+chr1	4686995	.	CAACCAACCAAC	.	.	.	END=4687006;RU=caac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,7,0,2:3,22:2,2:165.401:326.675,113.385:0.0,0.0:0.0,6.19326e-07,1.0
+chr1	4687079	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=4687118;RU=tttg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999473:10,10:10-10,10-10:14,9,0,8:10,14:3,2|4,1|5,2|6,1|8,1|9,1:196.508:326.675,113.385:0.0,0.0:4.71767e-36,0.000248488,0.999751
+chr1	4689281	.	CCGCCGCCGCCG	.	.	.	END=4689292;RU=ccg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:36,19,0,0:4,36:NULL:318.93:326.675,113.385:0.0,0.0:0.0,2.99631e-10,1.0
+chr1	4689823	.	AAACAAACAAAC	.	.	.	END=4689834;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:157.83:326.675,113.385:0.0,0.0:0.0,3.10126e-06,1.0
+chr1	4697276	.	CACACACACACACACACACACACA	.	.	.	END=4697299;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982059:12,12:11-13,11-13:14,6,0,8:11,2|12,12:4,1|6,1|8,2|9,1|10,2|11,1:184.4:326.675,113.385:0.280742,0.280742:1.87038e-14,0.0171058,0.98293
+chr1	4697462	.	ATTATTATTATT	.	.	.	END=4697473;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,20,0,2:4,31:3,2:325.467:326.675,113.385:0.0,0.0:0.0,2.24018e-09,1.0
+chr1	4698068	.	GGAGGAGGAGGA	.	.	.	END=4698079;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999945:4,4:4-4,4-4:17,6,0,3:4,17:3,3:141.186:326.675,113.385:0.0,0.0:0.0,2.1746e-05,0.999979
+chr1	4699171	.	TTTTGTTTTGTTTTG	.	.	.	END=4699185;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:196.267:326.675,113.385:0.0,0.0:0.0,4.22444e-08,1.0
+chr1	4700769	.	CCTCCTCCTCCT	.	.	.	END=4700780;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:101.437:326.675,113.385:0.0,0.0:0.0,1.29604e-05,0.999987
+chr1	4700784	.	CCACCACCACCA	.	.	.	END=4700795;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999771:4,4:4-4,4-4:15,4,0,3:4,15:3,3:116.705:326.675,113.385:0.0,0.0:7e-45,8.66633e-05,0.999917
+chr1	4702033	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4702088;RU=ac;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.603072:27,28:26-28,26-28:4,17,0,16:27,2|28,2:6,2|10,1|12,1|13,1|14,1|18,1|20,2|21,4|26,2|27,1:299.119:326.675,113.385:0.60323,0.547158:0.0242104,0.693448,0.282391
+chr1	4704115	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4704162;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.730822:23,24:23-24,24-24:8,14,0,10:23,3|24,5:5,2|11,2|15,3|17,1|18,1|23,1:250.512:326.675,113.385:0.498011,0.0990099:0.00034609,0.740631,0.259029
+chr1	4704841	.	TCTTTCTTTCTT	.	.	.	END=4704852;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:259.944:326.675,113.385:0.0,0.0:0.0,1.46928e-07,1.0
+chr1	4706710	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=4706733;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981548:6,6:6-6,6-6:9,4,0,4:6,9:3,2|4,1|5,1:103.685:326.675,113.385:0.0,0.0:8.31345e-23,0.00768594,0.992333
+chr1	4713034	.	ATATATATATAT	.	.	.	END=4713045;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999591:6,6:6-6,6-6:15,7,0,0:6,15:NULL:125.478:326.675,113.385:0.0,0.0:4.14375e-25,0.000265164,0.999736
+chr1	4715718	.	TTGTTGTTGTTG	.	.	.	END=4715729;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,9,0,2:4,19:3,2:175.124:326.675,113.385:0.0,0.0:0.0,8.15183e-06,0.999994
+chr1	4717842	.	TCTTTCTTTCTTTCTT	.	.	.	END=4717857;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:4,4:4-4,4-4:20,21,0,0:4,20:NULL:270.973:326.675,113.385:0.0,0.0:0.0,2.59705e-05,0.999978
+chr1	4718882	.	AACTAACTAACT	.	.	.	END=4718893;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999882:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.664:326.675,113.385:0.0,0.0:0.0,6.8464e-05,0.999933
+chr1	4719899	.	CACACACACACACACACA	.	.	.	END=4719916;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:24,6,0,0:9,24:NULL:154.629:326.675,113.385:0.0990099,0.0990099:9.45833e-37,6.36154e-07,1.0
+chr1	4722124	.	AAACAAACAAACAAAC	.	.	.	END=4722139;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999591:4,4:4-4,4-4:14,10,0,6:4,14:2,3|3,3:188.17:326.675,113.385:0.0,0.0:4.64806e-36,0.000157759,0.999843
+chr1	4725802	.	ACATACATACAT	.	.	.	END=4725813;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,8,0,0:3,27:NULL:182.575:326.675,113.385:0.0,0.0:0.0,4.38532e-08,1.0
+chr1	4726010	.	TTGCTTTGCTTTGCTTTGCTTTGCT	.	.	.	END=4726034;RU=ttgct;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:4-5,4-5:22,9,0,2:5,22:2,1|3,1:187.145:326.675,113.385:0.236383,0.236383:0.0,2.3239e-06,1.0
+chr1	4727699	.	ATAAATAAATAA	.	.	.	END=4727710;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998966:3,3:3-3,3-3:13,14,0,0:3,13:NULL:177.13:326.675,113.385:0.0,0.0:4.2333e-41,0.000612016,0.999392
+chr1	4730651	.	CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	.	.	.	END=4730686;RU=ctc;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9577:12,12:11-12,11-12:8,9,0,3:12,8:8,2|11,1:137.236:326.675,113.385:0.382696,0.382696:2.19064e-17,0.0232822,0.976764
+chr1	4732027	.	CTCTCTCTCTCTCT	.	.	.	END=4732040;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999355:7,7:7-8,7-8:23,12,0,4:7,21|8,2:4,1|5,1|6,2:242.981:326.675,113.385:0.169767,0.169767:1.39357e-38,6.40975e-07,1.0
+chr1	4736939	.	AAATAAATAAATAAAT	.	.	.	END=4736954;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.826804:4,4:4-4,4-4:6,8,0,0:4,6:NULL:94.3292:326.675,113.385:0.0,0.0:3.84179e-18,0.110392,0.889705
+chr1	4744698	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=4744727;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999864:6,6:6-6,6-6:16,9,0,4:6,16:2,1|3,2|5,1:173.344:326.675,113.385:0.0,0.0:0.0,8.61569e-05,0.999917
+chr1	4746881	.	TAGATAGATAGA	.	.	.	END=4746892;RU=taga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99898:3,3:3-3,3-3:13,7,0,0:3,13:NULL:113.283:326.675,113.385:0.0,0.0:1.927e-42,0.000512317,0.999491
+chr1	4749824	.	ATATATATATATATATATATATATATATATATATAT	.	.	.	END=4749859;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.355433:18,18:17-18,17-18:3,3,0,0:18,3:NULL:40.6567:326.675,113.385:0.607117,0.607117:0.00025367,0.373956,0.625845
+chr1	4755604	.	GGAGGGAGGGAGGGAG	.	.	.	END=4755619;RU=ggag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994918:4,4:4-4,4-4:11,2,0,2:4,11:2,2:74.6159:326.675,113.385:0.0,0.0:3.27251e-26,0.00232733,0.997678
+chr1	4755631	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	.	END=4755720;RU=gagag;PERIOD=5;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.204562:18,18:6-18,6-18:2,6,0,12:18,2:3,1|4,3|5,1|6,1|8,2|12,2|13,1|16,1:149.302:326.675,113.385:5.75506,5.75506:0.000265565,0.60808,0.39172
+chr1	4757329	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4757372;RU=ct;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.290199:22,22:18-22,18-22:6,7,0,3:21,2|22,4:5,1|6,1|12,1:120.818:326.675,113.385:1.77374,1.77374:0.00012047,0.657285,0.34262
+chr1	4758257	.	AATAAATAAATA	.	.	.	END=4758268;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992514:3,3:3-3,3-3:10,7,0,2:3,10:2,2:120.596:326.675,113.385:0.0,0.0:2.10875e-29,0.00267692,0.99733
+chr1	4761246	.	TTTGTTTGTTTG	.	.	.	END=4761257;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:129.24:326.675,113.385:0.0,0.0:0.0,2.46117e-06,1.0
+chr1	4765570	.	AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA	AAAGAAAAGAAAAGAAAAGAAAAGA	.	.	END=4765609;RU=aaaga;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.020438:5,5:8-8,8-8:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
+chr1	4767274	.	TTTTGTTTTGTTTTG	.	.	.	END=4767288;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.989:326.675,113.385:0.0,0.0:0.0,1.98159e-06,1.0
+chr1	4769727	.	TTTTTTTGTTTTTTTGTTTTTTTG	.	.	.	END=4769750;RU=tttttttg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.653109:3,3:1-3,1-3:4,3,0,0:3,4:NULL:42.5872:326.675,113.385:0.968882,0.968882:1.43076e-12,0.160707,0.839368
+chr1	4772542	.	AATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4772569;RU=aata;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.955763:7,7:7-7,7-7:7,9,0,7:7,7:3,1|5,2|6,4:162.133:326.675,113.385:0.0,0.0:5.84855e-18,0.0186585,0.981379
+chr1	4777183	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=4777216;RU=tc;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.754583:17,17:16-17,16-17:5,14,0,11:17,5:4,1|5,2|6,1|9,1|10,1|11,1|12,1|14,1|16,2:236.182:326.675,113.385:0.442564,0.442564:3.68037e-08,0.107497,0.892602
+chr1	4778087	.	TGTGTGTGTGTG	.	.	.	END=4778098;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996471:6,6:6-7,6-7:12,18,0,0:6,12:NULL:212.097:326.675,113.385:0.169767,0.169767:7.9323e-14,0.00208419,0.997921
+chr1	4779799	.	TGTGTGTGTGTGTG	.	.	.	END=4779812;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999693:7,7:7-7,7-7:15,1,0,2:7,15:5,1|6,1:84.5827:326.675,113.385:0.0,0.0:1.64184e-29,0.0001191,0.999881
+chr1	4780052	.	GTTTGTTTGTTT	.	.	.	END=4780063;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,7,0,2:3,20:2,2:156.501:326.675,113.385:0.0,0.0:0.0,2.69589e-06,1.0
+chr1	4781290	.	AAAACAAAACAAAACAAAAC	.	.	.	END=4781309;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998513:4,4:4-4,4-4:13,6,0,3:4,13:3,3:130.081:326.675,113.385:0.0,0.0:3.564e-42,0.000659424,0.999346
+chr1	4783247	.	ATATATATATATAT	.	.	.	END=4783260;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.97951:7,7:6-7,6-7:10,5,0,0:7,10:NULL:92.6401:326.675,113.385:0.253975,0.253975:2.75527e-13,0.0112003,0.988822
+chr1	4783908	.	AAAAAACAAAAAACAAAAAAC	.	.	.	END=4783928;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999388:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.87:326.675,113.385:0.0,0.0:0.0,0.00041394,0.99959
+chr1	4789575	.	TGAATGAATGAA	.	.	.	END=4789586;RU=tgaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:3,3:3-3,3-3:18,4,0,0:3,18:NULL:103.76:326.675,113.385:0.0,0.0:0.0,1.71272e-05,0.999986
+chr1	4790408	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=4790503;RU=aag;PERIOD=3;REF=32.0;EXPTHRESH=32	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0217444:31,31:6-32,6-32:0,12,0,13:NULL:6,1|7,2|9,1|12,1|15,1|22,1|28,4|29,1|31,1:211.088:326.675,113.385:11.7012,11.7012:0.153782,0.603073,0.243224
+chr1	4790591	.	AATAATAATAATAATAAT	.	.	.	END=4790608;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999865:6,6:6-6,6-6:16,1,0,2:6,16:4,1|5,1:86.8798:326.675,113.385:0.0,0.0:9.7689e-37,5.64849e-05,0.999947
+chr1	4794293	.	AGACAGACAGACAGACAGAC	.	.	.	END=4794312;RU=agac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999962:5,5:4-5,4-5:17,18,0,10:5,17:2,2|3,2|4,6:306.135:326.675,113.385:0.236383,0.236383:0.0,1.79042e-05,0.999986
+chr1	4795085	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	.	END=4795132;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.808038:12,12:11-12,11-12:6,5,0,6:12,6:4,2|6,1|7,2|9,1:115.137:326.675,113.385:0.486863,0.486863:1.85358e-15,0.117728,0.882373
+chr1	4795238	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=4795257;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999259:4,4:4-4,4-4:14,3,0,0:4,14:NULL:82.904:326.675,113.385:0.0,0.0:0.0,0.000434742,0.999568
+chr1	4796020	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=4796043;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999782:6,6:5-6,5-6:15,24,0,7:6,15:2,1|3,1|4,2|5,3:330.305:326.675,113.385:0.21692,0.21692:3.8787e-40,0.000165203,0.999835
+chr1	4802916	.	TCTCTCTCTCTCTC	.	.	.	END=4802929;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999643:7,7:6-7,6-7:16,14,0,0:7,16:NULL:187.072:326.675,113.385:0.258566,0.258566:1.91725e-19,0.000245916,0.999757
+chr1	4804071	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=4804095;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999989:5,5:5-5,5-5:18,8,0,2:5,18:3,1|4,1:156.963:326.675,113.385:0.0,0.0:0.0,1.81889e-05,0.999985
+chr1	4804879	.	AAAAACAAAAACAAAAAC	.	.	.	END=4804896;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:3,3:3-3,3-3:16,12,0,0:3,16:NULL:173.907:326.675,113.385:0.0,0.0:0.0,0.00012135,0.99988
+chr1	4805189	.	ATTTATTTATTT	.	.	.	END=4805200;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999635:3,3:3-3,3-3:15,9,0,0:3,15:NULL:140.572:326.675,113.385:0.0,0.0:0.0,0.000191892,0.999811
+chr1	4806133	.	TGTGTGTGTGTGTG	.	.	.	END=4806146;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:7,7:7-7,7-7:19,15,0,0:7,19:NULL:214.097:326.675,113.385:0.0,0.0:6.24431e-39,1.63575e-05,0.999986
+chr1	4806257	.	CTGACTGACTGA	.	.	.	END=4806268;RU=ctga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.994:326.675,113.385:0.0,0.0:0.0,2.00295e-05,0.99998
+chr1	4806381	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	.	END=4806412;RU=ttct;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.445733:8,8:6-8,6-8:3,10,0,13:8,3:2,1|3,1|4,1|5,3|6,7:196.493:326.675,113.385:0.390054,0.390054:0.000803766,0.336268,0.662947
+chr1	4808103	.	GCCTGCCTGCCT	.	.	.	END=4808114;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:195.369:326.675,113.385:0.0,0.0:0.0,2.4422e-07,1.0
+chr1	4809703	.	ATGAATGAATGAATGA	.	.	.	END=4809718;RU=atga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99999:4,4:4-4,4-4:18,5,0,2:4,18:2,1|3,1:134.833:326.675,113.385:0.0,0.0:0.0,1.84135e-05,0.999985
+chr1	4809829	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=4809848;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,10,0,0:4,21:NULL:174.053:326.675,113.385:0.0,0.0:0.0,5.23654e-06,0.999995
+chr1	4809864	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4809903;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.997816:20,21:20-20,20-21:17,11,0,14:19,2|20,12|21,3:5,1|7,3|9,1|13,2|14,1|16,1|17,3|19,1|21,1:302.448:326.675,113.385:0.0990099,0.521285:9.21874e-20,2.73005e-07,1.0
+chr1	4810353	.	TTTGTTTGTTTG	.	.	.	END=4810364;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:203.079:326.675,113.385:0.0,0.0:0.0,2.59322e-09,1.0
+chr1	4810746	.	CATGCATGCATG	.	.	.	END=4810757;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.068:326.675,113.385:0.0,0.0:0.0,7.25219e-07,1.0
+chr1	4810950	.	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	.	.	END=4811123;RU=ttctcc;PERIOD=6;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.181505:20,28:4-20,24-33:0,13,7,28:NULL:2,1|3,1|4,1|5,3|6,4|7,3|8,1|12,2|13,1|15,3|16,2|17,3|18,1|19,1|20,1:451.787:326.675,113.385:4.3648,2.33042:0.587313,0.412763,0.0
+chr1	4811609	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=4811650;RU=ga;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999961:21,21:19-21,19-21:25,13,0,9:19,2|20,2|21,21:5,1|8,1|11,2|12,2|16,1|17,1|21,1:310.978:326.675,113.385:0.339533,0.339533:0.0,4.87385e-05,0.999955
+chr1	4811806	.	TTTTGTTTTGTTTTG	.	.	.	END=4811820;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,10,0,4:3,29:2,4:232.858:326.675,113.385:0.0,0.0:0.0,3.1766e-09,1.0
+chr1	4814327	.	AAATAAATAAAT	.	.	.	END=4814338;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998738:3,3:3-3,3-3:13,9,0,0:3,13:NULL:134.801:326.675,113.385:0.0,0.0:6.24e-42,0.000728609,0.999272
+chr1	4815548	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=4815577;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99597:15,15:15-15,15-15:16,12,0,10:14,2|15,14:5,2|6,2|8,1|10,1|11,1|12,1|13,1|14,1:267.548:326.675,113.385:0.0990099,0.0990099:7.71523e-18,0.00342976,0.99658
+chr1	4817565	.	CAGCAGCAGCAG	.	.	.	END=4817576;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:29,17,0,0:4,29:NULL:271.562:326.675,113.385:0.0,0.0:0.0,2.73496e-08,1.0
+chr1	4819449	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=4819472;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999954:6,6:6-8,6-8:16,13,0,8:6,16:2,1|3,1|4,1|5,5:240.238:326.675,113.385:0.797014,0.797014:3e-45,2.72189e-05,0.999972
+chr1	4820555	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4820572;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.351083:9,12:9-9,9-14:31,20,0,10:9,31:4,3|5,3|6,1|7,1|12,2:410.123:326.675,113.385:0.0,1.53456:0.0,1.54242e-14,1.0
+chr1	4822262	.	TGTTTGTTTGTT	.	.	.	END=4822273;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.716:326.675,113.385:0.0,0.0:0.0,6.86054e-07,1.0
+chr1	4822494	.	CACACACACACA	.	.	.	END=4822505;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-7,6-7:23,20,0,7:6,23:4,1|5,5|6,1:327.044:326.675,113.385:0.169767,0.169767:0.0,2.23788e-07,1.0
+chr1	4823989	.	TGTCTGTCTGTCTGTCTGTCTGTC	.	.	.	END=4824012;RU=tgtc;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,12,0,3:6,21:3,1|5,2:217.679:326.675,113.385:0.0,0.0:0.0,1.83163e-06,1.0
+chr1	4831112	.	CTGGCTGGCTGG	.	.	.	END=4831123;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,10,0,0:3,30:NULL:208.27:326.675,113.385:0.0,0.0:0.0,5.0826e-09,1.0
+chr1	4832670	.	CTCCCTCCCTCC	CTCCCTCCCTCCCTCC	.	.	END=4832681;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.359416:3,4:3-3,3-4:23,22,0,3:3,23:2,2|4,1:343.057:326.675,113.385:0.0,0.519212:0.0,5.03971e-08,1.0
+chr1	4835862	.	TTTTGTTTTGTTTTG	.	.	.	END=4835876;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:199.012:326.675,113.385:0.0,0.0:0.0,2.26284e-08,1.0
+chr1	4836013	.	TTTCTTTTCTTTTCT	.	.	.	END=4836027;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:199.94:326.675,113.385:0.0,0.0:0.0,7.37652e-07,1.0
+chr1	4836682	.	TTTATTTATTTA	.	.	.	END=4836693;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,13,0,2:3,18:2,2:204.284:326.675,113.385:0.0,0.0:0.0,1.45272e-05,0.999987
+chr1	4837261	.	TTCATTCATTCATTCATTCA	.	.	.	END=4837280;RU=ttca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99859:5,5:5-5,5-5:13,7,0,0:5,13:NULL:113.046:326.675,113.385:0.0,0.0:8.49476e-37,0.000864304,0.999141
+chr1	4840709	.	AATAAATAAATA	.	.	.	END=4840720;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.951778:3,3:3-3,3-3:8,14,0,0:3,8:NULL:157.058:326.675,113.385:0.0,0.0:1.58998e-26,0.0305701,0.969486
+chr1	4841846	.	AAAGAAAGAAAG	.	.	.	END=4841857;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999869:3,3:3-3,3-3:16,4,0,0:3,16:NULL:102.145:326.675,113.385:0.0,0.0:0.0,6.76053e-05,0.999933
+chr1	4843541	.	TTTGTTTGTTTG	.	.	.	END=4843552;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,4,0,2:3,20:2,2:127.33:326.675,113.385:0.0,0.0:0.0,2.47031e-06,1.0
+chr1	4844779	.	AAAATAAAATAAAAT	.	.	.	END=4844793;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.43:326.675,113.385:0.0,0.0:0.0,2.47012e-06,1.0
+chr1	4845843	.	AAACAAACAAACAAACAAAC	.	.	.	END=4845862;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999957:5,5:5-5,5-5:17,14,0,5:5,17:3,3|4,2:229.622:326.675,113.385:0.0,0.0:0.0,2.45349e-05,0.999978
+chr1	4846452	.	CCAACCAACCAA	.	.	.	END=4846463;RU=ccaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99958:3,3:3-3,3-3:14,5,0,2:3,14:2,2:113.893:326.675,113.385:0.0,0.0:0.0,0.000159645,0.999842
+chr1	4848400	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=4848435;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977879:9,9:8-9,8-9:9,15,0,9:9,9:3,1|5,2|6,2|7,2|8,2:239.873:326.675,113.385:0.437216,0.437216:9.02383e-25,0.011419,0.988606
+chr1	4849030	.	AAAGAAAGAAAGAAAG	.	.	.	END=4849045;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999962:4,4:4-4,4-4:18,12,0,0:4,18:NULL:181.991:326.675,113.385:0.0,0.0:0.0,4.23994e-05,0.999957
+chr1	4849772	.	CAACAACAACAACAACAACAACAACAA	.	.	.	END=4849798;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:20,14,0,3:9,20:4,1|5,1|7,1:234.633:326.675,113.385:0.0990099,0.0990099:0.0,1.02211e-05,0.999993
+chr1	4850587	.	CACACACACACACACACACACACACACACA	.	.	.	END=4850616;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.504365:15,15:12-15,12-15:8,8,0,9:14,2|15,6:9,1|11,2|13,3|14,3:186.57:326.675,113.385:0.877565,0.877565:1.92327e-06,0.477716,0.522377
+chr1	4858043	.	GGGCCGGGCCGGGCCGGGCC	.	.	.	END=4858062;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,11,0,4:4,31:3,4:261.334:326.675,113.385:0.0,0.0:0.0,2.28666e-09,1.0
+chr1	4858328	.	GCTGCTGCTGCT	.	.	.	END=4858339;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,10,0,0:4,30:NULL:212.965:326.675,113.385:0.0,0.0:0.0,7.88224e-09,1.0
+chr1	4859454	.	CAAACAAACAAA	.	.	.	END=4859465;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.96338:3,3:3-3,3-3:8,1,0,0:3,8:NULL:42.1661:326.675,113.385:0.0,0.0:2.92369e-26,0.0150861,0.984943
+chr1	4859713	.	CTCTCTCTCTCTCTCT	.	.	.	END=4859728;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.957459:8,8:8-8,8-8:8,16,0,2:8,8:5,1|7,1:195.057:326.675,113.385:0.0,0.0:8.91426e-16,0.0212945,0.978746
+chr1	4861410	.	TTCTTTCTTTCT	.	.	.	END=4861421;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999288:3,3:3-3,3-3:13,7,0,3:3,13:2,3:138.485:326.675,113.385:0.0,0.0:1.7e-44,0.000239742,0.999765
+chr1	4862097	.	ACACACACACACACACAC	.	.	.	END=4862114;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988749:9,9:7-9,7-9:17,10,0,6:8,2|9,15:5,1|6,4|7,1:219.231:326.675,113.385:0.631028,0.631028:3.55181e-24,0.0112089,0.988814
+chr1	4862140	.	ACACACACACACAC	.	.	.	END=4862153;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976578:7,7:7-7,7-7:9,11,0,0:7,9:NULL:141.55:326.675,113.385:0.0,0.0:2.90656e-20,0.0134479,0.986579
+chr1	4864608	.	AAACAAACAAAC	.	.	.	END=4864619;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:153.582:326.675,113.385:0.0,0.0:0.0,1.29397e-06,1.0
+chr1	4866501	.	CCAGGCTGGCCTCCAGGCTGGCCTCCAGGCTGGCCT	.	.	.	END=4866536;RU=ccaggctggcct;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999134:3,3:3-3,3-3:14,6,0,2:3,14:2,2:130.066:326.675,113.385:0.0,0.0:1.10892e-17,0.000575615,0.99943
+chr1	4867295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4867334;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.943524:20,20:7-21,7-21:9,20,0,11:20,9:7,1|8,3|10,1|12,1|13,1|15,3|19,1:314.66:326.675,113.385:6.33959,6.33959:2.54871e-11,0.028072,0.971984
+chr1	4867339	.	TACATACATACATACA	.	.	.	END=4867354;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,17,0,3:4,19:3,3:256.592:326.675,113.385:0.0,0.0:0.0,1.11741e-05,0.999993
+chr1	4870254	.	TATTTATTTATT	.	.	.	END=4870265;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999891:3,3:3-3,3-3:16,8,0,3:3,16:2,3:156.429:326.675,113.385:0.0,0.0:0.0,4.43e-05,0.999956
+chr1	4871522	.	TCCTCCTCCTCC	.	.	.	END=4871533;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:253.255:326.675,113.385:0.0,0.0:0.0,5.23008e-10,1.0
+chr1	4874307	.	GGAAGGAAGGAA	.	.	.	END=4874318;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999929:3,3:3-3,3-3:17,5,0,0:3,17:NULL:113.657:326.675,113.385:0.0,0.0:0.0,3.86341e-05,0.999963
+chr1	4874466	.	AACAACAACAACAAC	.	.	.	END=4874480;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993029:5,5:4-5,4-5:11,8,0,0:5,11:NULL:115.916:326.675,113.385:0.492866,0.492866:1.06517e-32,0.00475677,0.995257
+chr1	4877242	.	TATTTATTTATTTATT	.	.	.	END=4877257;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999635:4,4:4-4,4-4:15,3,0,0:4,15:NULL:86.5963:326.675,113.385:0.0,0.0:3e-45,0.000210023,0.99979
+chr1	4878697	.	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	.	.	.	END=4878766;RU=ctctt;PERIOD=5;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.869346:14,14:13-14,13-14:6,9,0,11:14,6:2,1|3,2|5,2|7,1|10,1|11,1|12,3:187.457:326.675,113.385:0.495841,0.495841:3.7595e-17,0.0802297,0.919866
+chr1	4878791	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	.	END=4878822;RU=ctcc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.385621:8,8:6-8,6-8:3,10,0,0:8,3:NULL:108.263:326.675,113.385:0.592572,0.592572:5.86256e-05,0.414281,0.585739
+chr1	4880388	.	CTTCTTCTTCTT	.	.	.	END=4880399;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,13,0,0:4,23:NULL:208.752:326.675,113.385:0.0,0.0:0.0,1.05248e-06,1.0
+chr1	4881181	.	TGTTTTGTTTTGTTT	.	.	.	END=4881195;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999866:3,3:2-3,2-3:16,4,0,0:3,16:NULL:98.8823:326.675,113.385:0.44763,0.44763:0.0,7.15648e-05,0.999932
+chr1	4882279	.	TTATTATTATTA	.	.	.	END=4882290;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.910161:4,4:4-4,4-4:7,7,0,0:4,7:NULL:89.739:326.675,113.385:0.0,0.0:1.5882e-21,0.056422,0.943661
+chr1	4885247	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	.	END=4885286;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.973807:10,10:10-11,10-11:9,15,0,9:10,9:3,2|4,1|6,2|7,2|9,2:249.563:326.675,113.385:0.425627,0.425627:4.41641e-18,0.0157938,0.984241
+chr1	4885324	.	TTAGTTAGTTAGTTAGTTAGTTAG	.	.	.	END=4885347;RU=ttag;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998726:6,6:5-6,5-6:13,13,0,6:6,13:3,2|5,4:218.947:326.675,113.385:0.40582,0.40582:1.3011e-26,0.000756045,0.999248
+chr1	4890962	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=4890997;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:9,9:9-9,9-9:22,10,0,5:9,22:2,1|3,1|4,1|8,2:219.858:326.675,113.385:0.0990099,0.0990099:0.0,1.1242e-06,1.0
+chr1	4894530	.	GTTGGTTGGTTG	.	.	.	END=4894541;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:213.064:326.675,113.385:0.0,0.0:0.0,4.05818e-07,1.0
+chr1	4895853	.	CTCACTCACTCA	.	.	.	END=4895864;RU=ctca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,14,0,0:3,18:NULL:199.106:326.675,113.385:0.0,0.0:0.0,1.80082e-05,0.999985
+chr1	4899661	.	ACACACACACACACAC	.	.	.	END=4899676;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999948:8,8:8-8,8-8:26,12,0,2:7,2|8,24:6,2:240.928:326.675,113.385:0.0990099,0.0990099:3.6123e-41,5.54085e-05,0.999948
+chr1	4902415	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=4902432;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99869:9,9:9-12,9-12:14,7,0,2:9,14:7,2:137.093:326.675,113.385:1.27688,1.27688:1.593e-24,0.000449994,0.999553
+chr1	4902708	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=4902725;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.866791:9,9:9-10,9-10:7,8,0,0:9,7:NULL:102.351:326.675,113.385:0.486863,0.486863:2.29488e-12,0.0699126,0.930182
+chr1	4903639	.	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	.	.	.	END=4903674;RU=tttttg;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999917:6,6:6-6,6-6:17,9,0,2:6,17:3,1|5,1:173.895:326.675,113.385:0.0,0.0:0.0,6.41162e-05,0.99994
+chr1	4903855	.	TTTGTTTGTTTG	.	.	.	END=4903866;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990731:3,3:3-3,3-3:10,14,0,0:3,10:NULL:170.769:326.675,113.385:0.0,0.0:5.87266e-34,0.00569124,0.994324
+chr1	4905039	.	TACATACATACA	.	.	.	END=4905050;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,6,0,3:3,19:2,3:151.536:326.675,113.385:0.0,0.0:0.0,5.64564e-06,0.999995
+chr1	4905095	.	TGGATGGATGGA	.	.	.	END=4905106;RU=tgga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,4,0,2:3,25:2,2:148.365:326.675,113.385:0.0,0.0:0.0,8.21081e-08,1.0
+chr1	4909777	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4909828;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.321447:26,36:25-26,25-36:5,15,0,17:25,2|26,3:6,3|11,1|12,2|13,2|14,2|15,1|17,1|20,1|22,1|24,1|25,1|33,1:305.858:326.675,113.385:0.284901,4.78637:2.06714e-08,0.0110324,0.988992
+chr1	4909833	.	ATGCATGCATGC	.	.	.	END=4909844;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999905:3,3:3-3,3-3:16,17,0,0:3,16:NULL:217.664:326.675,113.385:0.0,0.0:0.0,7.34374e-05,0.999926
+chr1	4914303	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=4914366;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.640366:16,16:15-16,15-16:4,12,0,9:16,4:3,1|5,1|9,1|12,1|13,3|14,1|15,1:192.607:326.675,113.385:0.499779,0.499779:4.19595e-09,0.200213,0.79983
+chr1	4914896	.	GGAGGAGGAGGA	.	.	.	END=4914907;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.93709:4,4:4-4,4-4:8,15,0,0:4,8:NULL:166.795:326.675,113.385:0.0,0.0:8.34997e-25,0.0488196,0.951257
+chr1	4916037	.	TACATACATACATACA	.	.	.	END=4916052;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,2|4,1:275.235:326.675,113.385:0.0,0.0:0.0,7.53442e-10,1.0
+chr1	4918464	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	.	END=4918491;RU=ggag;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.935308:7,7:7-7,7-7:8,15,0,0:7,8:NULL:175.432:326.675,113.385:0.29703,0.29703:2.75131e-15,0.0517317,0.948348
+chr1	4918494	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4918545;RU=ga;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.930118:25,26:21-26,21-26:6,14,0,7:25,3|26,3:5,1|8,2|10,2|11,1|21,1:212.74:326.675,113.385:1.98598,1.86701:0.00122754,0.952779,0.0460742
+chr1	4920839	.	TTATTATTATTA	.	.	.	END=4920850;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998916:4,4:4-4,4-4:13,3,0,2:4,13:3,2:92.8638:326.675,113.385:0.0,0.0:9.477e-41,0.000412151,0.999591
+chr1	4920879	.	TGGCTGGCTGGC	.	.	.	END=4920890;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995248:3,3:3-3,3-3:11,7,0,0:3,11:NULL:106.999:326.675,113.385:0.0,0.0:7.72716e-29,0.00241556,0.997593
+chr1	4920889	.	GCCAGCCAGCCA	.	.	.	END=4920900;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995246:3,3:3-3,3-3:11,7,0,0:3,11:NULL:107.018:326.675,113.385:0.0,0.0:3.17835e-37,0.00238722,0.997618
+chr1	4921013	.	ATTTATTTATTT	.	.	.	END=4921024;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983079:3,3:3-3,3-3:9,9,0,0:3,9:NULL:115.759:326.675,113.385:0.0,0.0:8.49186e-29,0.00831875,0.991703
+chr1	4921202	.	TTCTTCTTCTTC	.	.	.	END=4921213;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996708:4,4:4-4,4-4:12,4,0,0:4,12:NULL:86.1021:326.675,113.385:0.0,0.0:6.54629e-39,0.00186305,0.998141
+chr1	4921293	.	ATTTATTTATTTATTT	.	.	.	END=4921308;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996908:4,4:4-4,4-4:12,12,0,0:4,12:NULL:152.192:326.675,113.385:0.0,0.0:2.11086e-32,0.00229159,0.997715
+chr1	4922764	.	AAATAAATAAAT	.	.	.	END=4922775;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999375:3,3:3-3,3-3:14,9,0,2:3,14:2,2:161.812:326.675,113.385:0.0,0.0:1e-45,0.000258235,0.999743
+chr1	4925089	.	ATTCATTCATTCATTCATTC	.	.	.	END=4925108;RU=attc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,19,0,7:5,25:3,1|4,5|5,1:319.377:326.675,113.385:0.0,0.0:0.0,7.26226e-08,1.0
+chr1	4930713	.	ATCTATCTATCT	.	.	.	END=4930724;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:3,3:3-3,3-3:18,12,0,0:3,18:NULL:177.406:326.675,113.385:0.0,0.0:0.0,2.00988e-05,0.99998
+chr1	4931717	.	AGAGAGAGAGAGAG	.	.	.	END=4931730;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-8,7-8:22,21,0,6:7,22:5,4|6,2:328.993:326.675,113.385:0.21692,0.21692:1e-45,1.63351e-06,1.0
+chr1	4931731	.	ACACACACACAC	.	.	.	END=4931742;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:21,20,0,0:6,21:NULL:267.481:326.675,113.385:0.0,0.0:0.0,8.48974e-06,0.999994
+chr1	4935229	.	CTCCCTCCCTCCCTCC	.	.	.	END=4935244;RU=ctcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:198.54:326.675,113.385:0.0,0.0:0.0,1.37551e-06,1.0
+chr1	4936747	.	AAACAAACAAAC	.	.	.	END=4936758;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,10,0,2:3,22:2,2:194.602:326.675,113.385:0.0,0.0:0.0,8.6363e-07,1.0
+chr1	4937389	.	AACAACAACAACAACAAC	.	.	.	END=4937406;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,13,0,6:6,25:4,2|5,4:264.154:326.675,113.385:0.0,0.0:0.0,9.31293e-08,1.0
+chr1	4938098	.	AGAAAGAAAGAA	.	.	.	END=4938109;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999394:3,3:3-3,3-3:14,4,0,0:3,14:NULL:92.2743:326.675,113.385:0.0,0.0:1e-45,0.000270359,0.999734
+chr1	4940874	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4940918;RU=aaaac;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98792:9,9:9-9,9-9:10,5,0,4:9,10:3,1|5,1|6,1|7,1:119.203:326.675,113.385:0.0,0.0:6.96937e-28,0.00650601,0.993511
+chr1	4941227	.	TTGTTGTTGTTG	.	.	.	END=4941238;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999974:4,4:4-4,4-4:18,7,0,0:4,18:NULL:140.213:326.675,113.385:0.0,0.0:0.0,3.12652e-05,0.999971
+chr1	4941826	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4941867;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.304313:21,26:20-22,20-27:7,17,0,13:20,3|21,4:5,1|6,1|9,2|11,1|15,2|16,1|17,1|18,1|19,1|21,1|26,1:297.187:326.675,113.385:0.393557,2.53527:5.53095e-16,0.00150292,0.998504
+chr1	4943920	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=4943943;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994255:12,12:9-12,9-12:12,17,0,9:12,12:4,2|5,1|6,1|7,1|8,1|9,3:280.274:326.675,113.385:1.09539,1.09539:4.15738e-18,0.00303051,0.99698
+chr1	4944834	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=4944857;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99596:6,6:6-6,6-6:11,13,0,4:6,11:2,1|4,2|5,1:196.374:326.675,113.385:0.0,0.0:9.78336e-31,0.00239827,0.997609
+chr1	4946471	.	ATAACATATAACATATAACAT	.	.	.	END=4946491;RU=ataacat;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999471:3,3:3-3,3-3:14,7,0,2:3,14:2,2:133.637:326.675,113.385:0.0,0.0:2.875e-42,0.000263905,0.999736
+chr1	4957150	.	AAACAAACAAAC	.	.	.	END=4957161;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,5,0,0:3,25:NULL:146.34:326.675,113.385:0.0,0.0:0.0,1.3194e-07,1.0
+chr1	4958201	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=4958218;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,4,0,0:3,28:NULL:148.516:326.675,113.385:0.0,0.0:0.0,1.95092e-08,1.0
+chr1	4960946	.	ACACACACACACACACACACACAC	.	.	.	END=4960969;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991119:12,12:10-12,10-12:11,11,0,5:12,11:4,1|5,3|10,1:182.992:326.675,113.385:0.788731,0.788731:3.74833e-18,0.0052448,0.994768
+chr1	4967461	.	GGTGGTGGTGGT	.	.	.	END=4967472;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:231.014:326.675,113.385:0.0,0.0:0.0,2.10865e-06,1.0
+chr1	4967521	.	CTTGCTTGCTTG	.	.	.	END=4967532;RU=cttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:210.541:326.675,113.385:0.0,0.0:0.0,1.61021e-06,1.0
+chr1	4976938	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=4976965;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.794639:14,15:14-14,14-15:35,14,0,15:13,2|14,31|15,2:5,2|6,1|7,3|8,4|9,1|11,2|12,1|15,1:416.39:326.675,113.385:0.0,0.498798:1.45964e-38,2.05051e-08,1.0
+chr1	4977099	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4977144;RU=ag;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.467761:23,24:22-24,22-24:8,11,0,4:22,2|23,4|24,2:6,1|10,1|13,1|21,1:180.98:326.675,113.385:0.479355,0.832743:0.00041485,0.339338,0.660268
+chr1	4977990	.	TCATCATCATCATCA	.	.	.	END=4978004;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999902:5,5:5-5,5-5:17,12,0,2:5,17:4,2:199.785:326.675,113.385:0.0,0.0:0.0,6.39382e-05,0.99994
+chr1	4983563	.	CATCATCATCAT	.	.	.	END=4983574;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,14,0,3:4,26:3,3:252.485:326.675,113.385:0.0,0.0:0.0,5.93857e-08,1.0
+chr1	4985196	.	TTTGTTTGTTTG	.	.	.	END=4985207;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,11,0,3:3,30:2,3:240.878:326.675,113.385:0.0,0.0:0.0,2.65166e-09,1.0
+chr1	4996877	.	TATATATATATATATATA	.	.	.	END=4996894;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.909:9,9:5-9,5-9:8,6,0,0:9,8:NULL:85.502:326.675,113.385:1.94745,1.94745:2.03074e-09,0.0722748,0.92782
+chr1	4998367	.	CTCCCTCCCTCC	.	.	.	END=4998378;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:148.076:326.675,113.385:0.0,0.0:0.0,9.50006e-06,0.999993
+chr1	5001697	.	TTTTGTTTTGTTTTG	.	.	.	END=5001711;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999795:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.747:326.675,113.385:0.0,0.0:0.0,0.000154956,0.999849
+chr1	5003140	.	ACACACACACACACACACACACACACAC	.	.	.	END=5003167;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998635:14,14:13-14,13-14:20,17,0,8:13,2|14,18:7,1|8,1|9,1|10,1|12,2|13,2:305.347:326.675,113.385:0.19802,0.19802:3.33707e-24,0.00138137,0.998625
+chr1	5005661	.	GAGGAGGAGGAG	.	.	.	END=5005672;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,19,0,7:4,28:3,7:339.99:326.675,113.385:0.0,0.0:0.0,1.08848e-08,1.0
+chr1	5007022	.	TTTATTTTATTTTAT	.	.	.	END=5007036;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999989:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.73:326.675,113.385:0.0,0.0:0.0,1.56403e-05,0.999986
+chr1	5008480	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=5008511;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:20,15,0,8:8,20:3,1|4,3|5,1|6,2|7,1:279.858:326.675,113.385:0.0,0.0:0.0,5.71248e-06,0.999995
+chr1	5011517	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5011560;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998362:22,22:22-22,22-22:14,7,0,14:22,14:5,2|8,1|13,2|14,1|17,2|18,2|20,1|21,2|22,1:244.354:326.675,113.385:0.139319,0.139319:5.65472e-23,0.000382178,0.999621
+chr1	5011684	.	AAAACAAAACAAAACAAAAC	.	.	.	END=5011703;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,7,0,3:4,19:3,3:161.314:326.675,113.385:0.0,0.0:0.0,5.98742e-06,0.999995
+chr1	5012007	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	.	END=5012062;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.882252:14,14:14-14,14-14:6,11,0,8:14,6:5,2|8,1|11,3|12,2:186.386:326.675,113.385:0.355334,0.355334:4.35448e-15,0.0746844,0.92541
+chr1	5013650	.	CAGAGCAGAGCAGAGCAGAGCAGAGCAGAG	.	.	.	END=5013679;RU=cagag;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.925409:6,6:5-6,5-6:19,9,0,4:5,2|6,17:3,2|4,1|5,1:194.947:326.675,113.385:0.442564,0.442564:0.0,0.0746917,0.925404
+chr1	5014848	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5014891;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.836759:22,22:21-23,21-23:18,23,0,18:21,3|22,12|23,3:6,1|7,1|8,1|9,1|10,2|11,2|14,1|15,1|16,1|17,3|18,1|21,3:450.295:326.675,113.385:0.661665,0.661665:1.00629e-12,0.0123263,0.987699
+chr1	5019542	.	CGCTCGCTCGCT	.	.	.	END=5019553;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:37,18,0,2:3,37:2,2:329.618:326.675,113.385:0.0,0.0:0.0,5.87802e-11,1.0
+chr1	5020039	.	GCCAGCCAGCCA	.	.	.	END=5020050;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:53,11,0,0:3,53:NULL:310.857:326.675,113.385:0.0,0.0:0.0,1.15808e-15,1.0
+chr1	5022514	.	TTGTTGTTGTTG	.	.	.	END=5022525;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,11,0,0:4,21:NULL:181.785:326.675,113.385:0.0,0.0:0.0,3.66862e-06,1.0
+chr1	5023422	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5023467;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990676:23,23:12-23,12-23:17,30,0,22:22,3|23,14:4,1|6,2|7,3|8,3|9,1|11,2|12,3|13,1|15,1|17,2|21,3:533.46:326.675,113.385:5.35709,5.35709:2.13956e-14,0.00902075,0.991
+chr1	5024078	.	AATAATAATAATAATAATAATAATAATAATAATAATAATAAT	.	.	.	END=5024119;RU=aat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.719744:14,14:12-14,12-14:5,5,0,9:14,5:4,1|5,1|6,2|8,1|9,1|10,1|11,1|13,1:140.5:326.675,113.385:0.765136,0.765136:3.24644e-08,0.164517,0.835557
+chr1	5026610	.	CTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=5026631;RU=ct;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996622:11,11:11-12,11-12:12,6,0,3:11,12:8,1|10,2:129.641:326.675,113.385:0.284901,0.284901:1.52129e-18,0.00103294,0.998968
+chr1	5030577	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=5030644;RU=tccc;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0282725:10,10:5-10,5-10:0,0,0,4:NULL:3,1|4,1|7,1|10,1:29.1062:326.675,113.385:2.2931,2.2931:1.0,0.0,0.0
+chr1	5032870	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5032919;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.652812:25,25:23-28,23-28:5,4,0,25:25,5:4,1|6,2|8,1|9,1|10,1|11,2|12,2|13,1|14,1|16,1|17,2|19,1|20,1|21,4|22,2|24,1|25,1:258.187:326.675,113.385:1.7121,1.7121:2.82121e-14,0.0563919,0.943694
+chr1	5034803	.	ACCCACCCACCC	.	.	.	END=5034814;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.920083:3,3:3-3,3-3:7,16,0,0:3,7:NULL:173.165:326.675,113.385:0.19802,0.19802:5.54696e-21,0.0536464,0.946438
+chr1	5042658	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=5042677;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:5,5:5-5,5-5:19,12,0,0:5,19:NULL:191.35:326.675,113.385:0.0,0.0:0.0,2.86153e-05,0.999972
+chr1	5043950	.	GTTTGTTTGTTTGTTT	.	.	.	END=5043965;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:3-4,3-4:22,19,0,3:4,22:2,1|3,2:284.906:326.675,113.385:0.21692,0.21692:0.0,1.11147e-06,1.0
+chr1	5046122	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=5046183;RU=ct;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.029794:31,31:28-34,28-34:0,11,0,9:NULL:7,1|10,1|12,1|15,2|20,2|25,1|31,1:172.568:326.675,113.385:1.12192,1.12192:1.72614e-08,0.478179,0.521908
+chr1	5046685	.	GTGGTGGTGGTG	.	.	.	END=5046696;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,32,0,0:4,30:NULL:418.869:326.675,113.385:0.0990099,0.0990099:0.0,1.7048e-08,1.0
+chr1	5047709	.	TATATATATATATA	.	.	.	END=5047722;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984738:7,7:7-9,7-9:10,4,0,0:7,10:NULL:74.9247:326.675,113.385:0.922441,0.922441:4.13136e-16,0.0068031,0.993212
+chr1	5055484	.	TGCTGCTGCTGC	.	.	.	END=5055495;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,10,0,0:4,19:NULL:162.768:326.675,113.385:0.0,0.0:0.0,1.46827e-05,0.999986
+chr1	5064770	.	GGCTGGCTGGCT	.	.	.	END=5064781;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:194.449:326.675,113.385:0.0,0.0:0.0,4.37869e-05,0.999957
+chr1	5066467	.	TTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCT	.	.	.	END=5066502;RU=tttcct;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,16,0,6:6,24:2,1|3,1|4,2|5,2:288.471:326.675,113.385:0.0,0.0:0.0,3.17017e-07,1.0
+chr1	5068662	.	CTCTCTCTCTCTCTCTCT	.	.	.	END=5068679;RU=ct;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.94179:9,9:9-9,9-9:7,9,0,2:9,7:7,1|8,1:124.687:326.675,113.385:0.0,0.0:1.14451e-16,0.0254612,0.974589
+chr1	5071017	.	ATTTATTTATTT	.	.	.	END=5071028;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999334:3,3:3-3,3-3:14,13,0,0:3,14:NULL:171.023:326.675,113.385:0.0,0.0:1.43838e-40,0.000438231,0.999567
+chr1	5073289	.	CTTCCTTCCTTC	.	.	.	END=5073300;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:146.637:326.675,113.385:0.0,0.0:0.0,2.01791e-05,0.99998
+chr1	5073332	.	CCCTCTCCCTCTCCCTCTCCCTCT	CCCTCT	.	.	END=5073355;RU=ccctct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0145428:1,1:1-1,1-1:0,6,0,0:NULL:NULL:50.552:326.675,113.385:0.0,0.0:0.106345,0.511468,0.38237
+chr1	5074855	.	AAACAAACAAACAAAC	.	.	.	END=5074870;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999781:4,4:4-4,4-4:15,6,0,3:4,15:3,3:138.025:326.675,113.385:0.0,0.0:0.0,8.98934e-05,0.999911
+chr1	5075461	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5075502;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.334589:21,42:21-21,21-42:16,14,0,6:20,4|21,12:8,1|13,1|14,1|19,1|20,1|42,1:275.005:326.675,113.385:0.0,10.4015:2.64187e-15,0.000464744,0.999538
+chr1	5076742	.	AAACAAAACAAAACA	.	.	.	END=5076756;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976225:3,3:3-3,3-3:9,18,0,0:3,9:NULL:209.489:326.675,113.385:0.0,0.0:4.81057e-29,0.0183779,0.981659
+chr1	5083412	.	GGGCCGGGCCGGGCCGGGCC	.	.	.	END=5083431;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998278:4,4:4-4,4-4:13,18,0,2:4,13:3,2:232.973:326.675,113.385:0.0,0.0:3.013e-42,0.0013592,0.998647
+chr1	5084805	.	ATGTATGTATGT	.	.	.	END=5084816;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.527:326.675,113.385:0.0,0.0:0.0,2.36315e-06,1.0
+chr1	5087801	.	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	.	.	.	END=5087900;RU=ctttc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.224341:20,20:18-20,18-20:2,15,0,27:20,2:3,3|4,2|5,2|6,1|7,1|8,1|9,2|10,3|11,1|12,5|16,1|17,2|18,3:341.413:326.675,113.385:1.01397,1.01397:6.01713e-05,0.632259,0.367732
+chr1	5087905	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=5087943;RU=tgt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999969:13,13:13-13,13-13:18,5,0,11:13,18:4,2|5,1|6,3|8,1|9,1|10,2|12,1:207.319:326.675,113.385:0.0,0.0:2.99767e-37,2.41469e-05,0.999978
+chr1	5089647	.	TTTATTTTATTTTAT	.	.	.	END=5089661;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:169.797:326.675,113.385:0.0,0.0:0.0,3.75043e-06,1.0
+chr1	5093894	.	ATTTTATTTTATTTT	.	.	.	END=5093908;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:210.294:326.675,113.385:0.0,0.0:0.0,2.23212e-05,0.999979
+chr1	5094712	.	ATATATATATATATATATATATATATATATAT	.	.	.	END=5094743;RU=at;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.957031:16,16:13-16,13-16:10,12,0,0:16,10:NULL:155.669:326.675,113.385:1.06729,1.06729:4.33584e-11,0.0290692,0.970985
+chr1	5094744	.	ACACACACACACACAC	.	.	.	END=5094759;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998945:8,8:8-8,8-8:14,12,0,3:8,14:6,2|7,1:191.816:326.675,113.385:0.139319,0.139319:1.03682e-19,0.000471918,0.99953
+chr1	5094790	.	ACACACACACACAC	.	.	.	END=5094803;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999462:7,7:7-7,7-7:14,11,0,4:7,14:6,1|7,3:189.759:326.675,113.385:0.0,0.0:0.0,4.86949e-05,0.999955
+chr1	5097446	.	TTTATTTATTTA	.	.	.	END=5097457;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:155.907:326.675,113.385:0.0,0.0:0.0,4.98331e-06,0.999995
+chr1	5102138	.	ATTTTATTTTATTTTATTTT	.	.	.	END=5102157;RU=atttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995369:4,4:4-4,4-4:11,12,0,2:4,11:3,2:170.556:326.675,113.385:0.0,0.0:2.25603e-36,0.00291734,0.997088
+chr1	5106170	.	ATTTATTTATTT	.	.	.	END=5106181;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:207.406:326.675,113.385:0.0,0.0:0.0,1.2672e-05,0.999987
+chr1	5119029	.	TGTATGTATGTA	.	.	.	END=5119040;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:232.028:326.675,113.385:0.0,0.0:0.0,3.10227e-06,1.0
+chr1	5120108	.	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=5120132;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:5,5:5-5,5-5:18,8,0,3:5,18:4,3:172.739:326.675,113.385:0.0,0.0:0.0,7.62036e-06,0.999994
+chr1	5122238	.	ATTTTATTTTATTTT	.	.	.	END=5122252;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:182.449:326.675,113.385:0.0,0.0:0.0,7.64385e-06,0.999994
+chr1	5124506	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=5124523;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999951:9,9:9-9,9-9:17,17,0,8:9,17:5,2|6,1|7,1|8,4:292.165:326.675,113.385:0.139319,0.139319:5.24719e-27,2.88864e-05,0.999972
+chr1	5130293	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=5130313;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99936:7,7:6-7,6-7:14,11,0,6:7,14:3,2|4,2|5,2:199.703:326.675,113.385:0.195027,0.195027:4.93393e-32,0.000344328,0.999659
+chr1	5131927	.	TTTATTTATTTATTTATTTATTTA	.	.	.	END=5131950;RU=ttta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,8,0,4:6,23:3,3|5,1:195.315:326.675,113.385:0.0,0.0:0.0,5.79974e-07,1.0
+chr1	5136692	.	TAATTAATTAATTAAT	.	.	.	END=5136707;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:241.36:326.675,113.385:0.0,0.0:0.0,4.79915e-06,0.999995
+chr1	5136778	.	TTTGTTTGTTTGTTTG	.	.	.	END=5136793;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:23,16,0,4:4,23:3,4:265.691:326.675,113.385:0.169767,0.169767:0.0,3.97615e-07,1.0
+chr1	5137285	.	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAA	.	.	.	END=5137324;RU=aacaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:8,8:7-8,7-8:18,19,0,11:8,18:3,2|4,1|5,3|6,2|7,3:330.796:326.675,113.385:0.311527,0.311527:0.0,2.48916e-05,0.999978
+chr1	5138729	.	AAATAAATAAAT	.	.	.	END=5138740;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999945:3,3:3-3,3-3:17,7,0,2:3,17:2,2:140.376:326.675,113.385:0.0,0.0:0.0,2.30953e-05,0.999979
+chr1	5139656	.	CACACACACACACACACACACACACACACACACACA	.	.	.	END=5139691;RU=ca;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.408681:18,18:17-19,17-19:15,9,0,8:17,2|18,10|19,3:8,1|9,1|10,1|12,3|14,1|17,1:223.782:326.675,113.385:0.646679,0.646679:6.46431e-13,0.00452802,0.995484
+chr1	5144394	.	TAAATAAATAAA	.	.	.	END=5144405;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,9,0,2:3,25:2,2:191.591:326.675,113.385:0.0,0.0:0.0,1.22971e-07,1.0
+chr1	5144427	.	AAAAGAAAAGAAAAG	.	.	.	END=5144441;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:164.921:326.675,113.385:0.0,0.0:0.0,7.35247e-07,1.0
+chr1	5146387	.	CTCTCTCTCTCTCT	.	.	.	END=5146400;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966795:7,7:7-7,7-7:9,12,0,0:7,9:NULL:144.35:326.675,113.385:0.29703,0.29703:2.06253e-17,0.0224026,0.977639
+chr1	5151445	.	TTGTTGTTGTTG	.	.	.	END=5151456;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999896:4,4:4-4,4-4:16,17,0,4:4,16:3,4:250.819:326.675,113.385:0.0,0.0:0.0,7.1918e-05,0.999932
+chr1	5152296	.	AAGTCAAGTCAAGTC	.	.	.	END=5152310;RU=aagtc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,7,0,2:3,25:2,2:180.137:326.675,113.385:0.0,0.0:0.0,1.04653e-07,1.0
+chr1	5155085	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=5155102;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.300237:6,7:6-6,6-8:15,10,0,3:6,15:5,2|7,1:186.515:326.675,113.385:0.0,0.859278:0.0,3.67236e-08,1.0
+chr1	5162575	.	TCCCCCTCCCCCTCCCCC	.	.	.	END=5162592;RU=tccccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99991:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.329:326.675,113.385:0.0,0.0:0.0,5.99108e-05,0.999941
+chr1	5163622	.	TCTCTCTCTCTCTCTC	.	.	.	END=5163637;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988585:8,8:8-9,8-9:23,10,0,2:8,21|9,2:4,1|7,1:212.43:326.675,113.385:0.425627,0.425627:0.0,8.37333e-07,1.0
+chr1	5164581	.	TGTTTTGTTTTGTTT	.	.	.	END=5164595;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:213.3:326.675,113.385:0.0,0.0:0.0,7.12203e-08,1.0
+chr1	5170810	.	CCACCACCACCA	.	.	.	END=5170821;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:326.038:326.675,113.385:0.0,0.0:0.0,7.19001e-07,1.0
+chr1	5173050	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=5173067;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999982:6,6:6-6,6-6:18,8,0,0:6,18:NULL:144.716:326.675,113.385:0.0,0.0:0.0,2.45148e-05,0.999978
+chr1	5173130	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=5173165;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995345:9,9:8-9,8-9:11,7,0,3:9,11:4,1|8,2:133.298:326.675,113.385:0.298675,0.298675:2.13587e-23,0.0021916,0.997814
+chr1	5181851	.	TAAATAAATAAA	.	.	.	END=5181862;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999774:3,3:3-3,3-3:15,5,0,2:3,15:2,2:116.435:326.675,113.385:0.0,0.0:0.0,8.72359e-05,0.999917
+chr1	5195638	.	GGGTGGGTGGGT	.	.	.	END=5195649;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988988:3,3:3-3,3-3:10,18,0,0:3,10:NULL:206.144:326.675,113.385:0.0,0.0:1.91723e-29,0.00707587,0.992941
+chr1	5199281	.	AACAACAACAACAACAACAAC	.	.	.	END=5199301;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,18,0,4:7,22:3,1|4,1|5,1|6,1:283.57:326.675,113.385:0.0,0.0:0.0,1.18639e-06,1.0
+chr1	5199415	.	TCAATTCAATTCAAT	.	.	.	END=5199429;RU=tcaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:173.551:326.675,113.385:0.0,0.0:0.0,7.79094e-07,1.0
+chr1	5203454	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5203499;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.990147:23,24:8-23,8-24:16,16,0,20:21,2|22,3|23,9|24,2:4,3|6,3|7,1|8,2|9,2|11,1|13,1|15,2|16,1|19,1|20,2|24,1:398.603:326.675,113.385:6.28355,6.4573:3.53341e-14,0.00125951,0.998746
+chr1	5204415	.	AAAACAAAACAAAAC	.	.	.	END=5204429;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:207.813:326.675,113.385:0.0,0.0:0.0,1.32214e-06,1.0
+chr1	5206150	.	TATTATTATTAT	.	.	.	END=5206161;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:179.209:326.675,113.385:0.0,0.0:0.0,5.83942e-06,0.999995
+chr1	5209488	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=5209507;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:29,17,0,4:5,29:2,2|3,1|4,1:305.847:326.675,113.385:0.0,0.0:0.0,1.4108e-08,1.0
+chr1	5212542	.	AATAAATAAATA	.	.	.	END=5212553;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999534:3,3:3-3,3-3:14,16,0,0:3,14:NULL:200.165:326.675,113.385:0.0,0.0:5e-44,0.000297945,0.999705
+chr1	5214463	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5214514;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.816593:26,26:22-26,22-26:8,24,0,22:25,2|26,6:5,2|6,1|8,1|10,2|12,2|14,2|15,1|16,1|17,2|20,1|21,3|22,1|23,1|24,1|26,1:439.895:326.675,113.385:1.52231,1.52231:7.61869e-14,0.109333,0.890764
+chr1	5214858	.	ACAAACAAACAAACAAACAAACAA	.	.	.	END=5214881;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:32,6,0,6:6,32:3,1|4,2|5,3:227.028:326.675,113.385:0.0,0.0:0.0,7.81639e-10,1.0
+chr1	5215016	.	AAACAAACAAACAAAC	.	.	.	END=5215031;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999896:4,4:4-4,4-4:16,14,0,4:4,16:3,4:222.896:326.675,113.385:0.0,0.0:0.0,5.2001e-05,0.999949
+chr1	5215414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=5215441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999947:7,7:6-7,6-7:17,11,0,7:7,17:3,1|5,2|6,4:222.254:326.675,113.385:0.35561,0.35561:0.0,2.25514e-05,0.999979
+chr1	5215633	.	GTTTTTTTGTTTTTTTGTTTTTTT	.	.	.	END=5215656;RU=gttttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929627:3,3:3-3,3-3:7,12,0,0:3,7:NULL:137.474:326.675,113.385:0.0,0.0:4.70423e-20,0.051824,0.948258
+chr1	5222650	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5222685;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.591313:18,18:7-20,7-20:12,7,0,8:17,3|18,9:5,1|7,2|9,1|11,1|12,1|13,2:186.063:326.675,113.385:3.56991,3.56991:4.53689e-11,0.404719,0.595353
+chr1	5222686	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5222719;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988323:17,17:12-17,12-17:10,9,0,6:17,10:6,3|12,1|16,1|17,1:168.324:326.675,113.385:2.15787,2.15787:1.15349e-24,0.00401421,0.995997
+chr1	5223713	.	TTTGTTTGTTTG	.	.	.	END=5223724;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999719:3,3:3-3,3-3:15,19,0,0:3,15:NULL:235.265:326.675,113.385:0.0,0.0:6e-45,0.000233093,0.999767
+chr1	5224486	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	.	END=5224521;RU=ttcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999249:9,9:8-9,8-9:14,10,0,0:9,14:NULL:153.745:326.675,113.385:0.270063,0.270063:5.5024e-40,0.000564618,0.999438
+chr1	5225503	.	TTTATTTATTTATTTATTTA	.	.	.	END=5225522;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:5,5:5-5,5-5:18,15,0,8:5,18:2,1|3,3|4,4:267.129:326.675,113.385:0.0,0.0:0.0,1.16671e-05,0.999987
+chr1	5225865	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5225896;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.378564:16,16:13-16,13-16:8,12,0,9:15,3|16,5:5,1|7,1|8,1|9,1|11,1|12,3|16,1:226.415:326.675,113.385:0.967363,0.967363:9.83265e-13,0.604702,0.395359
+chr1	5228543	.	TTTATTTATTTA	.	.	.	END=5228554;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,14,0,0:3,18:NULL:201.611:326.675,113.385:0.0,0.0:0.0,2.33616e-05,0.999979
+chr1	5232603	.	TAATAATAATAA	.	.	.	END=5232614;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,4,0,0:4,20:NULL:116.086:326.675,113.385:0.0,0.0:0.0,5.85088e-06,0.999995
+chr1	5237129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5237166;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996205:19,19:10-19,10-19:17,7,0,8:18,2|19,15:10,1|11,1|14,1|15,1|16,1|17,2|18,1:205.591:326.675,113.385:3.76193,3.76193:5.78756e-18,0.00365141,0.99636
+chr1	5237829	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5237896;RU=ttct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.762862:18,18:17-18,17-18:5,14,0,17:18,5:5,2|6,2|8,3|9,1|10,2|11,1|12,1|13,1|15,2|16,1|17,1:276.605:326.675,113.385:0.494455,0.494455:4.1147e-18,0.076631,0.923462
+chr1	5248663	.	ACCACCACCACC	.	.	.	END=5248674;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,18,0,4:4,32:3,4:326.504:326.675,113.385:0.0,0.0:0.0,7.37035e-10,1.0
+chr1	5256153	.	GAGCAAGAGCAAGAGCAA	.	.	.	END=5256170;RU=gagcaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:269.734:326.675,113.385:0.0,0.0:0.0,9.40678e-10,1.0
+chr1	5258418	.	CACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5258457;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:20,20:20-20,20-20:47,24,0,30:19,7|20,38|21,2:4,1|5,2|6,2|7,1|8,1|9,3|10,2|12,1|14,2|15,2|16,3|17,2|18,1|19,5|20,2:681.747:326.675,113.385:0.0990099,0.0990099:0.0,9.9887e-08,1.0
+chr1	5258712	.	GTTTGTTTGTTTGTTTGTTT	.	.	.	END=5258731;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:5,5:4-5,4-5:31,17,0,3:4,2|5,29:3,1|4,2:311.605:326.675,113.385:0.298675,0.298675:0.0,1.61664e-05,0.999986
+chr1	5259167	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=5259184;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992784:9,9:8-9,8-9:21,12,0,3:8,3|9,18:5,1|7,1|8,1:222.927:326.675,113.385:0.298675,0.298675:1.90519e-30,0.00723947,0.992776
+chr1	5260536	.	AGAGAGAGAGAG	.	.	.	END=5260547;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:27,11,0,2:6,27:4,1|5,1:221.878:326.675,113.385:0.139319,0.139319:0.0,3.43838e-08,1.0
+chr1	5261841	.	ACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCAC	.	.	.	END=5261894;RU=accctgtgaggggagcac;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.457035:3,3:1-3,1-3:8,18,0,0:3,8:NULL:212.032:326.675,113.385:0.982146,0.982146:1.46782e-08,0.542026,0.458084
+chr1	5274498	.	CACACACACACACACACACACACACACACA	.	.	.	END=5274527;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999387:15,15:14-15,14-15:20,18,0,9:14,2|15,18:4,2|5,2|10,1|11,1|14,3:327.507:326.675,113.385:0.290354,0.290354:1.052e-19,0.000612737,0.999392
+chr1	5275399	.	CCAACCAACCAACCAA	.	.	.	END=5275414;RU=ccaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999116:4,4:3-4,3-4:14,9,0,0:4,14:NULL:137.796:326.675,113.385:0.412766,0.412766:4e-45,0.000609573,0.999393
+chr1	5277383	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5277428;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.947523:23,23:22-23,22-23:11,11,0,8:22,2|23,9:5,1|7,1|8,1|16,2|17,3:221.047:326.675,113.385:0.335467,0.335467:4.2736e-11,0.0337459,0.966317
+chr1	5287020	.	CTTTCTTTCTTT	.	.	.	END=5287031;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:182.96:326.675,113.385:0.0,0.0:0.0,2.75502e-06,1.0
+chr1	5287167	.	CACTCACTCACT	.	.	.	END=5287178;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:222.996:326.675,113.385:0.0,0.0:0.0,9.17748e-07,1.0
+chr1	5292757	.	TATTTATTTATTTATT	.	.	.	END=5292772;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,12,0,2:4,31:2,1|3,1:249.227:326.675,113.385:0.0,0.0:0.0,2.36608e-09,1.0
+chr1	5293618	.	ACCCACCCACCC	.	.	.	END=5293629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997083:3,3:3-3,3-3:11,20,0,2:3,11:2,2:235.353:326.675,113.385:0.0,0.0:1.65754e-32,0.00180725,0.9982
+chr1	5296079	.	TCTCTCTCTCTC	.	.	.	END=5296090;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:24,16,0,0:6,24:NULL:243.658:326.675,113.385:0.339533,0.339533:0.0,1.01115e-06,1.0
+chr1	5297215	.	TTATTATTATTA	.	.	.	END=5297226;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:285.39:326.675,113.385:0.0,0.0:0.0,6.96663e-09,1.0
+chr1	5301831	.	AAAGAAAGAAAG	.	.	.	END=5301842;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,20,0,0:3,22:NULL:269.307:326.675,113.385:0.0,0.0:0.0,2.30349e-06,1.0
+chr1	5303346	.	TTTGTTTGTTTGTTTG	.	.	.	END=5303361;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999824:4,4:4-4,4-4:15,10,0,6:4,15:3,6:189.096:326.675,113.385:0.0,0.0:0.0,7.15698e-05,0.999932
+chr1	5303465	.	TAGGTAGGTAGG	.	.	.	END=5303476;RU=tagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,5,0,3:3,27:2,3:170.725:326.675,113.385:0.0,0.0:0.0,1.88107e-08,1.0
+chr1	5304109	.	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	.	.	.	END=5304158;RU=caaag;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999662:10,10:6-10,6-10:16,13,0,4:10,16:2,1|6,2|9,1:221.236:326.675,113.385:1.8278,1.8278:0.0,0.000306716,0.999697
+chr1	5305886	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5305925;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.357551:20,24:20-20,10-24:17,18,0,14:19,6|20,11:6,1|7,3|8,2|9,2|13,1|14,1|17,1|18,1|20,1|24,1:379.134:326.675,113.385:0.139319,5.17495:3.42354e-19,0.00235956,0.997647
+chr1	5306965	.	ATCATCATCATC	.	.	.	END=5306976;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:29,16,0,5:4,29:3,5:297.402:326.675,113.385:0.0,0.0:0.0,8.0037e-09,1.0
+chr1	5312273	.	TCTCTCTCTCTCTCTC	.	.	.	END=5312288;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99995:8,8:8-9,8-9:22,4,0,3:7,2|8,20:5,2|6,1:155.316:326.675,113.385:0.39604,0.39604:4.36e-43,6.0267e-05,0.999941
+chr1	5312289	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5312324;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981324:18,18:17-19,17-19:15,4,0,14:17,3|18,12:5,2|6,1|7,1|9,2|10,2|11,1|14,2|16,1|17,2:221.142:326.675,113.385:0.393557,0.393557:4.0892e-18,0.016289,0.983747
+chr1	5312324	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5312357;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.869753:17,17:16-17,16-17:17,9,0,7:16,3|17,14:4,1|8,3|13,1|16,2:218.032:326.675,113.385:0.419363,0.419363:3.86306e-25,0.13016,0.869937
+chr1	5318871	.	ACACACACACACACACACACACACACAC	.	.	.	END=5318898;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999671:14,14:14-14,14-14:16,10,0,11:14,16:4,1|5,1|7,1|8,1|9,1|11,2|12,2|13,2:246.933:326.675,113.385:0.0,0.0:1.71366e-21,0.00011102,0.999888
+chr1	5327635	.	CTCTTTCCCTCTTTCCCTCTTTCC	.	.	.	END=5327658;RU=ctctttcc;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985248:3,3:3-3,3-3:10,15,0,0:3,10:NULL:176.475:326.675,113.385:0.19802,0.19802:5.32981e-25,0.013287,0.986741
+chr1	5333023	.	TATATATATATATATA	.	.	.	END=5333038;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.802531:8,8:8-8,8-8:6,2,0,0:8,6:NULL:42.6017:326.675,113.385:0.0,0.0:6.33462e-08,0.0949859,0.905114
+chr1	5334011	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=5334042;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991203:16,16:16-16,16-16:14,4,0,4:15,2|16,12:5,1|10,1|13,1|15,1:131.76:326.675,113.385:0.139319,0.139319:1.15746e-14,0.00625518,0.99376
+chr1	5337377	.	TTTATTTATTTA	.	.	.	END=5337388;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:202.756:326.675,113.385:0.0,0.0:0.0,2.36752e-05,0.999979
+chr1	5340739	.	TATTTATTTATT	.	.	.	END=5340750;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983407:3,3:3-3,3-3:9,5,0,2:3,9:2,2:96.8479:326.675,113.385:0.0,0.0:4.01017e-31,0.00686109,0.993158
+chr1	5341947	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	.	END=5341974;RU=aagg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979243:7,7:6-7,6-7:9,15,0,2:7,9:6,2:192.077:326.675,113.385:0.442564,0.442564:5.8151e-25,0.0143806,0.985652
+chr1	5357169	.	GGGTGGGTGGGT	.	.	.	END=5357180;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984164:3,3:3-3,3-3:9,24,0,0:3,9:NULL:245.497:326.675,113.385:0.0,0.0:2.5687e-24,0.0106184,0.989403
+chr1	5365050	.	CCTCCCTCCCTC	.	.	.	END=5365061;RU=cctc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,9,0,2:3,27:2,2:205.87:326.675,113.385:0.0,0.0:0.0,1.47401e-08,1.0
+chr1	5368230	.	CTCTTGCGCTCTTGCGCTCTTGCGCTCTTGCG	.	.	.	END=5368261;RU=ctcttgcg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999916:4,4:4-4,4-4:16,17,0,3:4,16:3,3:243.009:326.675,113.385:0.0,0.0:0.0,8.91984e-05,0.999911
+chr1	5368294	.	CTTGCACTCTTGCACTCTTGCACT	.	.	.	END=5368317;RU=cttgcact;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999965:3,3:3-3,3-3:18,17,0,0:3,18:NULL:235.837:326.675,113.385:0.0,0.0:0.0,4.25038e-05,0.999957
+chr1	5369349	.	GTTTGTTTGTTT	.	.	.	END=5369360;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999752:3,3:3-3,3-3:15,4,0,2:3,15:2,2:112.933:326.675,113.385:0.0,0.0:0.0,8.85613e-05,0.999911
+chr1	5369470	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT	.	.	END=5369505;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0133204:12,12:15-19,15-19:0,5,0,0:NULL:NULL:47.5052:326.675,113.385:1.68323,1.68323:0.354018,0.483083,0.162943
+chr1	5374204	.	TTTGTTTGTTTGTTTG	.	.	.	END=5374219;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999914:4,4:4-4,4-4:17,4,0,0:4,17:NULL:104.508:326.675,113.385:0.0,0.0:0.0,5.65094e-05,0.999947
+chr1	5380595	.	ACACACACACAC	.	.	.	END=5380606;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,13,0,0:6,23:NULL:210.926:326.675,113.385:0.0,0.0:0.0,8.84609e-07,1.0
+chr1	5380856	.	TCTGTCTGTCTG	.	.	.	END=5380867;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,12,0,2:3,30:2,2:243.845:326.675,113.385:0.0,0.0:0.0,3.59975e-09,1.0
+chr1	5380890	.	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5380943;RU=ca;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.937524:27,27:18-27,18-27:8,15,0,18:27,8:7,1|9,1|11,2|12,1|13,1|14,1|17,2|18,1|22,3|23,1|25,3|26,1:317.864:326.675,113.385:4.08564,4.08564:5.81294e-08,0.0327406,0.967321
+chr1	5382870	.	GAGGAAGAGGAAGAGGAA	.	.	.	END=5382887;RU=gaggaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:197.584:326.675,113.385:0.0,0.0:0.0,2.89385e-06,1.0
+chr1	5384698	.	AGAAAGAAAGAAAGAA	.	.	.	END=5384713;RU=agaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994208:4,4:3-4,3-4:11,1,0,0:4,11:NULL:52.2596:326.675,113.385:0.452422,0.452422:1.09039e-36,0.00304955,0.996958
+chr1	5384783	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5384850;RU=ga;PERIOD=2;REF=34.0;EXPTHRESH=34	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.00722649:26,26:24-35,24-35:0,3,0,4:NULL:5,1|8,1|13,1|15,1:59.5948:326.675,113.385:2.9505,2.9505:0.523716,0.401562,0.0748556
+chr1	5384864	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	END=5384923;RU=agaa;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.995891:13,15:13-15,15-15:7,6,0,5:13,2|15,5:7,1|9,1|12,2|13,1:128.201:326.675,113.385:0.825531,0.0:1.40358e-11,0.996498,0.00350955
+chr1	5390035	.	CCTCCTCCTCCT	.	.	.	END=5390046;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:25,13,0,3:4,25:3,3:233.407:326.675,113.385:0.21692,0.21692:0.0,8.32903e-08,1.0
+chr1	5391563	.	TTTCTTTCTTTC	.	.	.	END=5391574;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.858:326.675,113.385:0.0,0.0:0.0,2.44321e-06,1.0
+chr1	5393656	.	TTTATTTATTTA	.	.	.	END=5393667;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99984:3,3:3-3,3-3:16,6,0,0:3,16:NULL:119.896:326.675,113.385:0.0,0.0:0.0,8.31027e-05,0.999918
+chr1	5400536	.	GGGGTGGGGGTGGGGGTG	.	.	.	END=5400553;RU=ggggtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986756:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.634:326.675,113.385:0.0,0.0:5.56677e-27,0.00952345,0.990499
+chr1	5400652	.	TAAATAAATAAATAAA	.	.	.	END=5400667;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:169.93:326.675,113.385:0.0,0.0:0.0,2.37959e-06,1.0
+chr1	5401591	.	CAAACAAACAAACAAACAAA	.	.	.	END=5401610;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998896:5,5:4-5,4-5:15,18,0,0:5,15:NULL:226.268:326.675,113.385:0.284901,0.284901:5.5e-44,0.00102301,0.998982
+chr1	5407272	.	AATAAATAAATAAATA	.	.	.	END=5407287;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,20,0,4:4,32:2,2|3,1|4,1:340.155:326.675,113.385:0.0,0.0:0.0,1.50266e-09,1.0
+chr1	5411524	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5411557;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.900944:17,17:16-17,16-17:21,16,0,19:16,6|17,15:4,1|5,3|6,1|9,1|10,4|11,1|12,2|13,1|14,2|15,3:398.882:326.675,113.385:0.437216,0.437216:2.70896e-15,0.0991223,0.900982
+chr1	5412318	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=5412335;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999588:9,9:9-9,9-9:15,5,0,2:9,15:7,2:121.002:326.675,113.385:0.0,0.0:1.725e-24,0.000183454,0.999819
+chr1	5412585	.	GCAGGCAGGCAG	.	.	.	END=5412596;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:141.585:326.675,113.385:0.0,0.0:0.0,5.03885e-06,0.999995
+chr1	5414201	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5414252;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.799191:26,26:26-26,26-26:6,5,0,16:26,6:4,1|5,2|8,1|11,1|13,1|15,1|16,2|17,1|18,1|20,1|21,1|22,1|25,2:200.894:326.675,113.385:0.0,0.0:2.87718e-07,0.0580028,0.942083
+chr1	5420026	.	ATGTATGTATGT	.	.	.	END=5420037;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999831:3,3:3-3,3-3:16,4,0,0:3,16:NULL:101.288:326.675,113.385:0.0,0.0:0.0,9.05735e-05,0.999911
+chr1	5421453	.	AGAAAAGAAAAGAAA	.	.	.	END=5421467;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99925:3,3:3-3,3-3:14,11,0,2:3,14:2,2:171.015:326.675,113.385:0.0,0.0:1.787e-42,0.000363445,0.999637
+chr1	5421483	.	AACAAACAAACAAACA	.	.	.	END=5421498;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98592:4,4:4-4,4-4:10,10,0,3:4,10:2,3:155.459:326.675,113.385:0.0,0.0:7.92884e-30,0.00829948,0.991719
+chr1	5421960	.	TTTGTTTGTTTG	.	.	.	END=5421971;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998824:3,3:2-3,2-3:13,8,0,0:3,13:NULL:131.18:326.675,113.385:0.452422,0.452422:2.207e-42,0.000683346,0.999318
+chr1	5429464	.	GGGTGGGTGGGT	.	.	.	END=5429475;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992779:3,3:3-3,3-3:10,25,0,0:3,10:NULL:265.199:326.675,113.385:0.0,0.0:1.95984e-27,0.00480293,0.995206
+chr1	5439295	.	AAATAAATAAAT	.	.	.	END=5439306;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999972:3,3:3-3,3-3:17,14,0,3:3,17:2,3:218.014:326.675,113.385:0.0,0.0:0.0,1.9811e-05,0.99998
+chr1	5439862	.	AAAAACAAAAACAAAAAC	.	.	.	END=5439879;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,12,0,2:3,28:2,2:231.902:326.675,113.385:0.0,0.0:0.0,2.05311e-08,1.0
+chr1	5439880	.	CAAGCAAGCAAG	.	.	.	END=5439891;RU=caag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,14,0,2:3,28:2,2:247.995:326.675,113.385:0.0,0.0:0.0,1.62076e-08,1.0
+chr1	5440024	.	AAAACAAAACAAAAC	.	.	.	END=5440038;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:183.432:326.675,113.385:0.0,0.0:0.0,2.03527e-08,1.0
+chr1	5448684	.	GTGGTGGTGGTG	.	.	.	END=5448695;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:4,4:4-4,4-4:19,8,0,0:4,19:NULL:144.751:326.675,113.385:0.0,0.0:0.0,1.63653e-05,0.999986
+chr1	5448817	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5448840;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982701:6,6:6-6,6-6:9,13,0,5:6,9:2,1|4,2|5,2:191.308:326.675,113.385:0.0,0.0:8.67818e-27,0.0079832,0.992034
+chr1	5448857	.	AAACAAAACAAAACA	.	.	.	END=5448871;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.937648:3,3:3-3,3-3:8,13,0,0:3,8:NULL:154.225:326.675,113.385:0.220506,0.220506:1.31029e-26,0.0483356,0.95174
+chr1	5449710	.	TTTCTTTCTTTC	.	.	.	END=5449721;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:251.345:326.675,113.385:0.0,0.0:0.0,3.88499e-10,1.0
+chr1	5450202	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5450241;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.91676:20,20:19-20,19-20:20,22,0,30:18,2|19,4|20,14:6,1|7,2|8,2|9,4|10,2|11,3|13,4|14,1|15,2|17,2|18,3|19,4:532.856:326.675,113.385:0.391308,0.391308:2.08895e-13,0.0831682,0.916927
+chr1	5457139	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5457182;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.947557:22,23:22-22,21-23:22,8,0,11:20,2|21,5|22,15:5,1|6,1|10,1|14,1|16,1|17,1|18,1|19,1|21,2|23,1:292.012:326.675,113.385:0.0990099,0.738271:2.52359e-16,0.000188425,0.999812
+chr1	5457182	.	GAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5457205;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980078:12,12:10-12,10-12:21,12,0,6:10,2|11,2|12,17:8,1|9,1|10,2|11,2:261.833:326.675,113.385:0.640587,0.640587:1.28858e-27,0.0199597,0.980082
+chr1	5458563	.	GTTGGTTGGTTG	.	.	.	END=5458574;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:191.171:326.675,113.385:0.0,0.0:0.0,2.52026e-07,1.0
+chr1	5467842	.	TTGTTTGTTTGT	.	.	.	END=5467853;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.865:326.675,113.385:0.0,0.0:0.0,8.0646e-07,1.0
+chr1	5469905	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	.	END=5469964;RU=ttct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998617:15,15:13-16,13-16:13,23,0,23:15,13:2,1|4,2|5,1|7,1|8,2|9,2|10,2|11,6|12,2|13,1|14,3:441.154:326.675,113.385:0.554102,0.554102:2.05185e-19,0.000934836,0.999067
+chr1	5470375	.	ATTTATTTATTTATTTATTT	.	.	.	END=5470394;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:19,10,0,5:5,19:4,5:204.259:326.675,113.385:0.270063,0.270063:0.0,5.63075e-06,0.999995
+chr1	5487012	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=5487095;RU=aga;PERIOD=3;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0350084:26,26:26-28,26-28:0,13,0,14:NULL:5,1|8,1|10,1|15,2|16,1|19,1|21,1|22,3|24,1|26,2:224.711:326.675,113.385:0.788731,0.788731:0.213982,0.516544,0.269537
+chr1	5487104	.	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	.	.	.	END=5487154;RU=gag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.227302:17,17:10-17,10-17:3,6,0,7:17,3:5,2|7,1|8,1|10,2|11,1:122.998:326.675,113.385:3.21628,3.21628:1.88104e-06,0.621967,0.378086
+chr1	5491577	.	TTTCTTTCTTTCTTTC	.	.	.	END=5491592;RU=tttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999873:4,4:4-4,4-4:16,14,0,2:4,16:2,1|3,1:203.31:326.675,113.385:0.0,0.0:0.0,7.7951e-05,0.999925
+chr1	5495145	.	TATTATTATTAT	.	.	.	END=5495156;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:190.37:326.675,113.385:0.0,0.0:0.0,9.03848e-07,1.0
+chr1	5499413	.	AAACAAACAAAC	.	.	.	END=5499424;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:183.415:326.675,113.385:0.0,0.0:0.0,3.58705e-08,1.0
+chr1	5499767	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	AT	.	.	END=5499818;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	.
+chr1	5504534	.	TATTTATTTATT	.	.	.	END=5504545;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:216.165:326.675,113.385:0.0,0.0:0.0,3.61663e-07,1.0
+chr1	5513530	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5513567;RU=tc;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987245:19,19:11-19,11-19:11,10,0,11:19,11:5,1|6,1|8,1|9,1|13,2|14,2|15,3:226.557:326.675,113.385:3.57627,3.57627:1.20532e-13,0.00759209,0.992424
+chr1	5516671	.	TCTCTCTCTCTCTC	.	.	.	END=5516684;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999066:7,7:7-8,7-8:14,9,0,0:7,14:NULL:143.434:326.675,113.385:0.390807,0.390807:7.46736e-28,0.000425895,0.999576
+chr1	5518233	.	ACACACACACAC	.	.	.	END=5518244;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:203.485:326.675,113.385:0.139319,0.139319:0.0,1.84411e-08,1.0
+chr1	5522366	.	TTTATTTATTTA	.	.	.	END=5522377;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99986:3,3:3-3,3-3:16,19,0,0:3,16:NULL:231.943:326.675,113.385:0.0,0.0:0.0,0.000107282,0.999895
+chr1	5526299	.	TTATTTATTTATTTATTTATTTAT	.	.	.	END=5526322;RU=ttat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999737:6,6:6-6,6-6:15,3,0,2:6,15:5,2:102.456:326.675,113.385:0.0,0.0:2.452e-42,0.000103453,0.999896
+chr1	5531371	.	AAATAAATAAATAAAT	.	.	.	END=5531386;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:4,4:4-4,4-4:18,9,0,2:4,18:2,1|3,1:165.399:326.675,113.385:0.0,0.0:0.0,2.12228e-05,0.999979
+chr1	5532982	.	TGTGTGTGTGTGTGTG	.	.	.	END=5532997;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:27,12,0,3:8,27:6,1|7,2:250.369:326.675,113.385:0.0,0.0:1.72e-43,5.25782e-08,1.0
+chr1	5534046	.	ATGTATGTATGTATGT	.	.	.	END=5534061;RU=atgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,16,0,3:4,27:3,3:272.756:326.675,113.385:0.0,0.0:0.0,1.82221e-08,1.0
+chr1	5534075	.	TATGTATGTATGTATG	.	.	.	END=5534090;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,15,0,2:4,30:3,2:273.347:326.675,113.385:0.0,0.0:0.0,3.21582e-09,1.0
+chr1	5534127	.	TGTGTGTGTGTG	.	.	.	END=5534138;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:31,20,0,4:6,31:4,1|5,3:344.947:326.675,113.385:0.0,0.0:0.0,1.02131e-09,1.0
+chr1	5538600	.	TTTTGTTTTGTTTTG	.	.	.	END=5538614;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.842:326.675,113.385:0.0,0.0:0.0,3.18443e-07,1.0
+chr1	5539245	.	AGAGAGAGAGAG	.	.	.	END=5539256;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-7,6-7:20,15,0,0:6,20:NULL:216.86:326.675,113.385:0.236383,0.236383:0.0,7.99914e-06,0.999994
+chr1	5541995	.	TCTATCTATCTA	.	.	.	END=5542006;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,7,0,0:3,25:NULL:162.531:326.675,113.385:0.0,0.0:0.0,1.63627e-07,1.0
+chr1	5543920	.	AAACAAACAAACAAACAAAC	.	.	.	END=5543939;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:32,8,0,3:5,32:4,3:218.073:326.675,113.385:0.0,0.0:0.0,7.62889e-10,1.0
+chr1	5548928	.	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	.	.	.	END=5548963;RU=gtgtgc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:3-6,3-6:21,12,0,6:6,21:2,1|4,1|5,4:243.175:326.675,113.385:0.650759,0.650759:0.0,1.87243e-06,1.0
+chr1	5568606	.	TATATATATATATATATATATATATATATATA	.	.	.	END=5568637;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.241205:16,16:11-16,11-16:3,0,0,0:16,3:NULL:13.3392:326.675,113.385:1.94044,1.94044:0.0041078,0.534572,0.461435
+chr1	5568681	.	TCTCTCTCTCTCTCTCTCTC	.	.	.	END=5568700;RU=tc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.389106:10,10:10-10,10-10:3,1,0,0:10,3:NULL:20.8043:326.675,113.385:0.0,0.0:0.000122906,0.325088,0.674802
+chr1	5568724	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=5568751;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.667283:14,14:14-14,14-14:5,3,0,0:14,5:NULL:46.9753:326.675,113.385:0.0,0.0:4.33107e-07,0.162209,0.837866
+chr1	5571339	.	AACAACAACAAC	.	.	.	END=5571350;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999866:4,4:2-4,2-4:16,9,0,2:4,16:3,2:161.802:326.675,113.385:0.885129,0.885129:3.8e-44,6.70363e-05,0.999934
+chr1	5573523	.	GAAAGAAAGAAAGAAA	.	.	.	END=5573538;RU=gaaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-5,4-5:23,14,0,4:4,23:3,4:249.905:326.675,113.385:0.311527,0.311527:0.0,4.699e-07,1.0
+chr1	5573587	.	AAAGAAAGAAAG	.	.	.	END=5573598;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,15,0,2:3,24:3,2:244.91:326.675,113.385:0.0,0.0:0.0,1.01008e-07,1.0
+chr1	5579717	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5579762;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.28606:23,25:21-23,21-28:4,10,0,14:23,4:5,1|6,1|8,1|9,1|12,2|13,1|14,1|15,1|17,1|21,1|22,2|25,1:229.174:326.675,113.385:0.446534,1.60396:2.90831e-11,0.000185028,0.999818
+chr1	5581808	.	GTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5581829;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.918632:11,11:11-12,11-12:7,5,0,3:11,7:6,1|10,1|11,1:96.9763:326.675,113.385:0.40582,0.40582:1.2915e-18,0.016726,0.983311
+chr1	5585680	.	CTCTCTCTCTCT	.	.	.	END=5585691;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985692:6,6:6-6,6-6:10,9,0,0:6,10:NULL:122.269:326.675,113.385:0.0,0.0:2.78805e-20,0.00890045,0.99112
+chr1	5589327	.	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	.	.	.	END=5589356;RU=ggt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.964384:10,10:9-10,9-10:8,11,0,4:10,8:4,1|5,1|9,2:162.775:326.675,113.385:0.465241,0.465241:2.92195e-21,0.0195605,0.980478
+chr1	5589376	.	TGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5589399;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992728:12,12:9-12,9-12:11,11,0,4:12,11:7,1|10,1|11,2:180.542:326.675,113.385:1.30955,1.30955:2.36841e-16,0.00337366,0.996634
+chr1	5589780	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5589835;RU=tg;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.434615:28,28:25-29,25-29:4,10,0,15:28,4:4,1|8,2|10,2|11,1|13,2|14,2|18,2|19,1|21,1|26,1:229.133:326.675,113.385:1.42595,1.42595:5.64146e-05,0.301819,0.698134
+chr1	5592598	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5592667;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.217245:35,35:30-35,30-35:2,17,0,16:35,2:5,1|6,2|10,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|26,1|28,1|29,1|34,2:297.947:326.675,113.385:1.11605,1.11605:0.00272634,0.394995,0.602354
+chr1	5593742	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5593777;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.971211:18,18:17-18,17-18:16,12,0,11:17,3|18,13:4,1|5,1|7,1|9,1|11,1|12,1|13,2|14,1|15,1|17,1:276.968:326.675,113.385:0.323567,0.323567:7.60834e-14,0.0281487,0.971905
+chr1	5594362	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594409;RU=acagatatcagc;PERIOD=12;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993895:4,4:4-4,4-4:11,12,0,6:4,11:3,6:194.69:326.675,113.385:0.0,0.0:1.35695e-13,0.00487052,0.995139
+chr1	5594483	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594518;RU=acagatatcagc;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99893:3,3:3-3,3-3:13,11,0,3:3,13:2,2|3,1:171.44:326.675,113.385:0.0,0.0:2.17272e-24,0.000780489,0.999225
+chr1	5601522	.	CTCTCTCTCTCTCTCT	.	.	.	END=5601537;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.859694:8,8:6-8,6-8:7,2,0,0:8,7:NULL:47.0547:326.675,113.385:0.81164,0.81164:3.07523e-11,0.0813469,0.918751
+chr1	5601538	.	CACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=5601571;RU=ca;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.226687:15,15:15-17,15-17:2,4,0,4:15,2:4,1|8,1|10,1|14,1:74.861:326.675,113.385:0.733609,0.733609:0.596184,0.403375,0.000510556
+chr1	5605789	.	TATATATATATA	.	.	.	END=5605800;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.680517:6,6:6-7,6-7:5,5,0,0:6,5:NULL:67.2546:326.675,113.385:0.491073,0.491073:1.41842e-09,0.179353,0.820711
+chr1	5607518	.	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	.	.	END=5607567;RU=ccctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0418975:6,6:6-9,6-9:0,3,0,0:NULL:NULL:28.9:326.675,113.385:1.35727,1.35727:0.366524,0.478544,0.154989
+chr1	5609483	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=5609534;RU=tctt;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.820827:12,13:8-13,13-13:9,13,0,13:12,2|13,7:4,1|5,1|6,3|7,3|9,1|10,3|12,1:260.367:326.675,113.385:1.75429,0.0:1.0024e-14,0.823073,0.176996
+chr1	5609614	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5609639;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.542862:13,13:11-13,11-13:4,12,0,4:13,4:7,2|9,1|11,1:160.209:326.675,113.385:0.497617,0.497617:1.63911e-05,0.276384,0.723601
+chr1	5612315	.	CTGGCTGGCTGG	.	.	.	END=5612326;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.940243:3,3:3-3,3-3:7,15,0,0:3,7:NULL:175.706:326.675,113.385:0.0,0.0:7.17578e-23,0.0445383,0.955537
+chr1	5612776	.	TTTATTTATTTA	.	.	.	END=5612787;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999421:3,3:3-3,3-3:14,4,0,0:3,14:NULL:91.4822:326.675,113.385:0.0,0.0:5.724e-42,0.000277712,0.999727
+chr1	5614359	.	TCCCTCCCTCCCTCCC	.	.	.	END=5614374;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999522:4,4:4-4,4-4:15,13,0,0:4,15:NULL:179.777:326.675,113.385:0.0,0.0:0.0,0.000362995,0.999637
+chr1	5616757	.	AAGCAAGCAAGC	.	.	.	END=5616768;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999902:3,3:3-3,3-3:16,8,0,2:3,16:2,2:151.309:326.675,113.385:0.0,0.0:0.0,4.69939e-05,0.999956
+chr1	5617140	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5617189;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.343833:25,25:24-26,24-26:11,6,0,9:24,3|25,6|26,2:7,1|9,1|11,1|15,1|17,1|18,1|19,1|20,1|23,1:192.044:326.675,113.385:0.713833,0.713833:5.2481e-07,0.146591,0.853494
+chr1	5617615	.	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	.	.	END=5617699;RU=ttctc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0362275:20,20:16-20,16-20:0,1,0,7:NULL:4,1|6,1|10,1|13,1|15,1|16,2:57.8107:326.675,113.385:1.3165,1.3165:0.059034,0.378311,0.562803
+chr1	5618977	.	CAGCAGCAGCAG	.	.	.	END=5618988;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:4,4:4-4,4-4:20,11,0,0:4,20:NULL:187.212:326.675,113.385:0.0,0.0:0.0,1.45056e-05,0.999987
+chr1	5620595	.	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5620640;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.370281:23,23:22-24,22-24:6,4,0,12:22,2|23,4:6,1|7,2|11,1|12,1|18,1|19,1|20,1|21,1|22,3:165.941:326.675,113.385:0.722976,0.722976:0.000106707,0.555466,0.444532
+chr1	5623551	.	TTATTTTATTTTATT	.	.	.	END=5623565;RU=ttatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999475:3,3:3-3,3-3:14,5,0,2:3,14:2,2:115.762:326.675,113.385:0.0,0.0:1e-44,0.000232575,0.999772
+chr1	5625250	.	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5625297;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.576253:24,24:23-24,23-24:22,19,0,11:23,7|24,15:7,1|8,1|10,1|12,1|16,1|20,1|21,2|22,2|23,1:376.926:326.675,113.385:0.452422,0.452422:2.10056e-11,0.4238,0.576288
+chr1	5626755	.	TATATATATATATA	.	.	.	END=5626768;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.951073:7,7:7-7,7-7:8,3,0,0:7,8:NULL:57.6703:326.675,113.385:0.0,0.0:2.05221e-11,0.0266218,0.973432
+chr1	5627434	.	ACCCACCCACCC	.	.	.	END=5627445;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981742:3,3:3-3,3-3:9,4,0,0:3,9:NULL:71.9961:326.675,113.385:0.0,0.0:7.77127e-24,0.00726744,0.992752
+chr1	5628800	.	GTGTGTGTGTGT	.	.	.	END=5628811;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999816:6,6:6-6,6-6:16,16,0,0:6,16:NULL:198.309:326.675,113.385:0.0,0.0:1.65706e-33,0.000107345,0.999895
+chr1	5634536	.	ACATACATACAT	.	.	.	END=5634547;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999689:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.811:326.675,113.385:0.0,0.0:3.2e-44,0.000172858,0.999827
+chr1	5645300	.	CCACCCACCCACCCAC	.	.	.	END=5645315;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987727:4,4:4-4,4-4:10,10,0,0:4,10:NULL:132.37:326.675,113.385:0.0,0.0:1.37064e-33,0.00887219,0.991149
+chr1	5648208	.	TTTCTTTCTTTC	.	.	.	END=5648219;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998321:3,3:3-3,3-3:13,6,0,0:3,13:NULL:107.261:326.675,113.385:0.0,0.0:4.6e-44,0.00108233,0.998922
+chr1	5658059	.	AACCAACCAACCAACCAACCAACCAACCAACC	.	.	.	END=5658090;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995541:8,8:8-8,8-8:11,4,0,7:8,11:3,2|6,2|7,3:134.487:326.675,113.385:0.0,0.0:2.63941e-34,0.0014174,0.998587
+chr1	5659996	.	ACACACACACACAC	.	.	.	END=5660009;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:23,7,0,2:7,23:5,1|6,1:172.037:326.675,113.385:0.0,0.0:0.0,5.81845e-07,1.0
+chr1	5667369	.	TTGTTTTGTTTTGTT	.	.	.	END=5667383;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991355:3,3:3-3,3-3:10,9,0,0:3,10:NULL:123.116:326.675,113.385:0.0,0.0:3.09465e-33,0.00534692,0.994664
+chr1	5668188	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5668233;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.878676:23,23:22-23,22-23:7,12,0,9:23,7:8,1|12,2|15,2|16,2|17,1|20,1:213.066:326.675,113.385:0.298675,0.298675:7.90049e-11,0.0683182,0.931775
+chr1	5668714	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=5668747;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.937667:17,17:17-18,17-18:21,12,0,12:17,18|18,3:6,1|7,1|8,2|10,2|12,1|13,1|15,3|16,1:308.257:326.675,113.385:0.334882,0.334882:4.03709e-26,5.38759e-06,0.999995
+chr1	5683487	.	CAAACAAACAAACAAA	.	.	.	END=5683502;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999211:4,4:3-4,3-4:13,15,0,3:4,13:3,3:210.706:326.675,113.385:0.40582,0.40582:2.35e-43,0.000417593,0.999584
+chr1	5686946	.	ACTCCACTCCACTCCACTCCACTCC	.	.	.	END=5686970;RU=actcc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,11,0,4:5,21:3,2|4,2:214.731:326.675,113.385:0.0,0.0:0.0,1.48824e-06,1.0
+chr1	5691957	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5691994;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.774457:18,19:16-19,19-19:6,7,0,11:18,2|19,4:6,2|7,1|8,1|9,2|10,1|13,1|17,1|18,2:184.123:326.675,113.385:1.0388,0.139319:1.04829e-05,0.781348,0.218685
+chr1	5702366	.	GGGTGGGTGGGT	.	.	.	END=5702377;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.952356:3,3:3-3,3-3:7,30,0,2:3,7:2,2:314.196:326.675,113.385:0.0,0.0:6.10428e-21,0.0250173,0.975031
+chr1	5703039	.	TTTCTTTCTTTC	.	.	.	END=5703050;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999954:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.288:326.675,113.385:0.0,0.0:0.0,1.64207e-05,0.999986
+chr1	5703348	.	TCTCTCTCTCTC	.	.	.	END=5703359;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999944:6,6:6-6,6-6:17,15,0,2:6,17:5,1|6,1:213.761:326.675,113.385:0.0,0.0:4.966e-42,1.96654e-05,0.99998
+chr1	5705129	.	TTTATTTATTTA	.	.	.	END=5705140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:18,9,0,2:3,18:2,2:172.875:326.675,113.385:0.0,0.0:0.0,1.42805e-05,0.999987
+chr1	5705229	.	CCCACCCACCCA	.	.	.	END=5705240;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.539:326.675,113.385:0.0,0.0:0.0,2.42264e-06,1.0
+chr1	5706741	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5706764;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99992:6,6:5-6,5-6:17,8,0,3:6,17:3,2|5,1:162.246:326.675,113.385:0.236383,0.236383:0.0,4.85328e-05,0.999955
+chr1	5708798	.	TTTATTTATTTA	.	.	.	END=5708809;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.191:326.675,113.385:0.0,0.0:0.0,5.58044e-06,0.999995
+chr1	5709925	.	TTCTTTCTTTCT	.	.	.	END=5709936;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:224.239:326.675,113.385:0.0,0.0:0.0,9.42141e-08,1.0
+chr1	5710226	.	TTGTTTTGTTTTGTTTTGTT	.	.	.	END=5710245;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,19,0,5:4,23:2,1|3,4:301.264:326.675,113.385:0.0,0.0:0.0,4.63585e-07,1.0
+chr1	5712340	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=5712369;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997542:6,6:6-6,6-6:12,6,0,3:6,12:2,1|3,1|5,1:124.805:326.675,113.385:0.0,0.0:2.80473e-30,0.00135867,0.998648
+chr1	5718275	.	TTTATTTATTTA	.	.	.	END=5718286;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.25:326.675,113.385:0.0,0.0:0.0,2.59941e-06,1.0
+chr1	5722194	.	TATATATATATA	.	.	.	END=5722205;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.936977:6,6:5-7,5-7:8,2,0,0:6,8:NULL:48.6909:326.675,113.385:0.651813,0.651813:1.33637e-13,0.034441,0.965621
+chr1	5722249	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5722268;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995876:4,4:4-4,4-4:11,5,0,2:4,11:3,2:99.6182:326.675,113.385:0.0,0.0:5.11647e-38,0.0017386,0.998268
+chr1	5727994	.	ATACATACATAC	.	.	.	END=5728005;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.919973:3,3:3-3,3-3:7,5,0,0:3,7:NULL:75.9551:326.675,113.385:0.0,0.0:7.27925e-25,0.0435556,0.956519
+chr1	5733779	.	ACCCACCCACCC	.	.	.	END=5733790;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930157:3,3:3-3,3-3:7,15,0,0:3,7:NULL:161.446:326.675,113.385:0.0,0.0:3.30203e-21,0.0487605,0.951318
+chr1	5742710	.	GGGTGGGTGGGT	.	.	.	END=5742721;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.958695:3,3:3-3,3-3:7,33,0,2:3,7:2,2:337.752:326.675,113.385:0.0,0.0:8.78633e-22,0.0259419,0.974111
+chr1	5743415	.	TTTATTTATTTA	.	.	.	END=5743426;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,14,0,0:3,27:NULL:231.169:326.675,113.385:0.0,0.0:0.0,4.34196e-08,1.0
+chr1	5743494	.	CCCACCCACCCACCCA	.	.	.	END=5743509;RU=ccca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997609:4,4:4-4,4-4:12,23,0,3:4,12:2,1|3,2:280.913:326.675,113.385:0.0,0.0:5.76151e-36,0.00168956,0.998315
+chr1	5749087	.	CTCTTGCTCTTGCTCTTG	.	.	.	END=5749104;RU=ctcttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:211.324:326.675,113.385:0.0,0.0:0.0,2.97405e-08,1.0
+chr1	5759909	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5759948;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.96388:20,20:18-21,18-21:13,9,0,7:18,2|20,11:9,1|10,1|11,2|18,1|19,1|20,1:200.219:326.675,113.385:0.49505,0.49505:7.4202e-20,0.0325171,0.967542
+chr1	5762305	.	AGAGAGAGAGAGAGAG	.	.	.	END=5762320;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999964:8,8:8-8,8-8:18,13,0,2:8,18:5,1|6,1:200.676:326.675,113.385:0.0,0.0:6.50713e-37,2.77855e-05,0.999972
+chr1	5769922	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=5769941;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:5,5:5-5,5-5:16,10,0,4:5,16:4,4:189.343:326.675,113.385:0.0,0.0:0.0,3.41362e-05,0.99997
+chr1	5772735	.	AAATAAATAAATAAAT	.	.	.	END=5772750;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999846:4,4:4-4,4-4:17,11,0,0:4,17:NULL:171.988:326.675,113.385:0.0,0.0:0.0,0.000125561,0.999879
+chr1	5773613	.	GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	GGAGGGGAGGGGAGGGGAGGGGAGG	.	.	END=5773672;RU=ggagg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0502929:5,5:4-6,4-6:0,2,0,5:NULL:3,2|4,2|5,1:52.5778:326.675,113.385:0.782491,0.782491:1.0,0.0,0.0
+chr1	5774929	.	AAAATAAAATAAAATAAAATAAAATAAAATAAAAT	.	.	.	END=5774963;RU=aaaat;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999866:7,7:6-7,6-7:16,9,0,6:7,16:3,2|4,2|5,2:193.838:326.675,113.385:0.311527,0.311527:6.10738e-38,9.78369e-05,0.999903
+chr1	5775613	.	AAACAAACAAACAAAC	.	.	.	END=5775628;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,16,0,5:4,21:3,5:266.998:326.675,113.385:0.0,0.0:0.0,1.32175e-06,1.0
+chr1	5779912	.	AATAATAATAATAAT	.	.	.	END=5779926;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.738405:5,5:5-5,5-5:5,10,0,0:5,5:NULL:112.525:326.675,113.385:0.29703,0.29703:1.91527e-11,0.178554,0.821514
+chr1	5780434	.	CATTGTGAGCATTGTGAGCATTGTGAG	.	.	.	END=5780460;RU=cattgtgag;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999569:3,3:3-3,3-3:15,11,0,0:3,15:NULL:167.59:326.675,113.385:0.0,0.0:0.0,0.000368101,0.999636
+chr1	5781296	.	TTATTATTATTA	.	.	.	END=5781307;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:20,8,0,2:4,20:3,2:164.757:326.675,113.385:0.0,0.0:0.0,3.46079e-06,1.0
+chr1	5783455	.	GTGGGTGGGTGG	GTGGGTGGGTGGGTGGGTGGGTGGGTGG	.	.	END=5783466;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:1.0:3,7:3-3,7-7:24,23,0,0:3,18|7,6:NULL:317.768:326.675,113.385:0.0,0.557277:0.0,2.32863e-16,1.0
+chr1	5785041	.	TAAATAAATAAA	.	.	.	END=5785052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:132.735:326.675,113.385:0.0,0.0:0.0,9.0504e-06,0.999994
+chr1	5785417	.	TTATTTATTTAT	.	.	.	END=5785428;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:296.537:326.675,113.385:0.0,0.0:0.0,1.65893e-09,1.0
+chr1	5791745	.	CACACACACACACA	.	.	.	END=5791758;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:6-7,6-7:43,18,0,6:6,3|7,38|8,2:6,6:405.178:326.675,113.385:0.195027,0.195027:0.0,6.50369e-07,1.0
+chr1	5793084	.	AATAAATAAATA	.	.	.	END=5793095;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:160.328:326.675,113.385:0.0,0.0:0.0,1.96478e-07,1.0
+chr1	5795883	.	TAAATAAATAAA	.	.	.	END=5795894;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.643:326.675,113.385:0.0,0.0:0.0,8.64019e-08,1.0
+chr1	5796091	.	TTTGTTTTGTTTTGT	.	.	.	END=5796105;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,8,0,0:3,30:NULL:194.535:326.675,113.385:0.0,0.0:0.0,4.90667e-09,1.0
+chr1	5796722	.	AATAAATAAATA	.	.	.	END=5796733;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:2-3,2-3:18,14,0,0:3,18:NULL:203.111:326.675,113.385:0.35561,0.35561:0.0,1.86871e-05,0.999985
+chr1	5797431	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5797454;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:23,6,0,5:6,23:4,3|5,2:186.325:326.675,113.385:0.410384,0.410384:0.0,4.34187e-07,1.0
+chr1	5799311	.	TATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATA	.	.	END=5799348;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.982163:17,19:6-19,6-19:9,2,0,0:17,4|19,5:NULL:65.3645:326.675,113.385:4.72276,4.99312:1.88777e-05,0.990785,0.00921863
+chr1	5799404	.	TAAATAAATAAA	.	.	.	END=5799415;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998939:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.1688:326.675,113.385:0.0,0.0:1.8887e-37,0.000540242,0.999462
+chr1	5800120	.	TTATTATTATTATTA	.	.	.	END=5800134;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99239:5,5:5-5,5-5:11,11,0,0:5,11:NULL:145.145:326.675,113.385:0.0,0.0:9.87934e-32,0.00529762,0.994716
+chr1	5803800	.	CAACAACAACAACAA	.	.	.	END=5803814;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,8,0,5:5,24:4,5:208.194:326.675,113.385:0.0,0.0:0.0,1.5221e-07,1.0
+chr1	5813834	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=5813884;RU=tct;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.94456:16,17:16-17,17-17:12,23,0,10:16,3|17,9:4,1|7,1|9,1|10,1|11,2|13,1|14,1|15,1|16,1:356.573:326.675,113.385:0.469019,0.0:1.41439e-15,0.94468,0.0554052
+chr1	5813889	.	TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	.	.	END=5813933;RU=ttctt;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.610104:9,12:9-9,11-13:9,22,0,20:9,9:3,2|4,2|5,1|6,4|7,3|8,5|11,2|12,1:399.269:326.675,113.385:0.0,0.613702:1e-45,9.28955e-22,1.0
+chr1	5819521	.	AAACAAACAAACAAACAAAC	.	.	.	END=5819540;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999981:5,5:5-5,5-5:18,15,0,7:5,18:2,1|3,4|4,2:261.639:326.675,113.385:0.0,0.0:0.0,1.39299e-05,0.999987
+chr1	5829633	.	TTCCTTCCTTCC	.	.	.	END=5829644;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:244.365:326.675,113.385:0.0,0.0:0.0,5.32516e-08,1.0
+chr1	5831560	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	.	END=5831615;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998937:14,14:9-15,9-15:13,13,0,15:14,13:4,1|5,1|8,3|9,3|11,1|12,1|13,5:282.937:326.675,113.385:1.39944,1.39944:8.61859e-31,0.000348108,0.999652
+chr1	5832533	.	AACAAACAAACA	.	.	.	END=5832544;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997564:3,3:3-3,3-3:13,21,0,0:3,13:NULL:243.631:326.675,113.385:0.0,0.0:2.98e-43,0.00208502,0.99792
+chr1	5833064	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=5833091;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:23,16,0,10:7,23:3,2|4,2|5,2|6,4:319.451:326.675,113.385:0.0,0.0:0.0,4.69348e-07,1.0
+chr1	5836792	.	TTTTGTTTTGTTTTG	.	.	.	END=5836806;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,4,0,2:3,28:2,1|3,1:161.592:326.675,113.385:0.0,0.0:0.0,8.26137e-09,1.0
+chr1	5843531	.	GTTGTTGTTGTT	.	.	.	END=5843542;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999906:4,4:4-4,4-4:17,11,0,0:4,17:NULL:166.827:326.675,113.385:0.0,0.0:1.1e-43,6.42646e-05,0.99994
+chr1	5844583	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5844632;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.348451:25,25:23-25,23-25:8,10,0,15:24,3|25,5:5,1|6,1|11,2|12,2|13,1|14,1|16,1|18,1|20,3|23,1|24,1:254.626:326.675,113.385:0.561658,0.561658:6.94529e-05,0.630722,0.369266
+chr1	5861282	.	ATATATATATAT	.	.	.	END=5861293;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999911:6,6:6-6,6-6:17,6,0,0:6,17:NULL:118.354:326.675,113.385:0.0,0.0:2.05423e-27,5.61991e-05,0.999947
+chr1	5863544	.	GGGTGGGTGGGT	.	.	.	END=5863555;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.849824:3,3:3-3,3-3:6,28,0,2:3,6:2,2:289.551:326.675,113.385:0.278639,0.278639:8.24928e-16,0.0757857,0.924308
+chr1	5864371	.	ATTAATTAATTA	.	.	.	END=5864382;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:3,3:3-3,3-3:18,8,0,0:3,18:NULL:146.274:326.675,113.385:0.0,0.0:0.0,1.68976e-05,0.999986
+chr1	5865370	.	TCTCTCTCTCTCTC	.	.	.	END=5865383;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-8,7-8:20,8,0,4:7,20:4,1|5,3:182.858:326.675,113.385:0.253975,0.253975:7.068e-42,5.16475e-06,0.999995
+chr1	5868012	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5868059;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.848199:24,24:22-24,22-24:7,13,0,16:24,7:7,1|9,1|10,1|13,2|14,2|15,3|16,1|21,1|22,1|23,2|24,1:283.199:326.675,113.385:0.467344,0.467344:4.72747e-16,0.0181405,0.9819
+chr1	5871062	.	TATTTTATTTTATTT	.	.	.	END=5871076;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999792:3,3:3-3,3-3:15,15,0,2:3,15:2,2:213.109:326.675,113.385:0.0,0.0:3e-45,0.000128777,0.999873
+chr1	5877999	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=5878042;RU=gata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.999836:10,10:10-10,10-10:16,15,0,6:10,16:5,1|7,2|8,1|9,2:251.085:326.675,113.385:0.0,0.0:0.999909,9.38047e-05,6.43078e-23
+chr1	5882501	.	TAAATAAATAAA	.	.	.	END=5882512;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,10,0,0:3,36:NULL:229.319:326.675,113.385:0.0,0.0:0.0,1.04705e-10,1.0
+chr1	5887687	.	AGAATAGAATAGAAT	.	.	.	END=5887701;RU=agaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:220.324:326.675,113.385:0.0,0.0:0.0,6.13223e-09,1.0
+chr1	5889757	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=5889788;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995842:16,16:16-17,16-17:26,18,0,25:16,23|17,3:5,1|6,1|7,2|8,1|9,2|10,1|11,4|12,3|13,3|14,4|15,3:487.37:326.675,113.385:0.284901,0.284901:5.44931e-31,2.91005e-07,1.0
+chr1	5890307	.	ACAAAACAAAACAAA	.	.	.	END=5890321;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:227.577:326.675,113.385:0.0,0.0:0.0,2.32011e-06,1.0
+chr1	5896268	.	TAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=5896295;RU=taga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,14,0,4:7,22:3,1|4,1|5,1|6,1:252.308:326.675,113.385:0.0,0.0:2.80159e-28,3.30435e-06,1.0
+chr1	5896295	.	AGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	.	END=5896330;RU=agac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999706:9,9:9-9,9-9:15,15,0,8:9,15:5,2|6,1|7,3|8,2:261.206:326.675,113.385:0.0,0.0:1.00938e-31,0.000138485,0.999864
+chr1	5897769	.	ATATATATATAT	.	.	.	END=5897780;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99999:6,6:6-6,6-6:32,15,0,0:6,29|7,3:NULL:275.497:326.675,113.385:0.0990099,0.0990099:3.05501e-34,1.71758e-08,1.0
+chr1	5897783	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5897826;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.97549:22,22:19-23,19-23:16,22,0,25:22,14|23,2:5,2|6,1|7,3|9,2|10,4|11,3|12,2|13,3|14,2|19,2|21,1:474.739:326.675,113.385:0.657354,0.657354:1.16935e-16,0.000428123,0.999575
+chr1	5897969	.	ACACACACACACACACAC	.	.	.	END=5897986;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.944427:9,9:7-19,7-19:29,17,0,8:8,3|9,26:6,4|7,2|8,1|16,1:361.609:326.675,113.385:3.5902,3.5902:1.1e-44,5.74913e-05,0.999942
+chr1	5898251	.	TTGTTGTTGTTG	.	.	.	END=5898262;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:178.491:326.675,113.385:0.0,0.0:0.0,1.01053e-05,0.999993
+chr1	5899946	.	CATACATACATACATACATACATACATACATACATACATA	.	.	.	END=5899985;RU=cata;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999909:10,10:10-10,10-10:17,13,0,12:10,17:3,1|4,1|5,2|6,1|7,3|8,3|9,1:279.428:326.675,113.385:0.0990099,0.0990099:2.73826e-25,4.24703e-05,0.999957
+chr1	5899987	.	GTATGTATGTAT	.	.	.	END=5899998;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,10,0,0:3,19:NULL:170.457:326.675,113.385:0.0,0.0:0.0,1.08231e-05,0.999993
+chr1	5902689	.	CACACACACACACACACACACACACACACA	.	.	.	END=5902718;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997902:15,15:13-15,13-15:20,14,0,13:13,2|15,18:4,2|6,1|7,1|8,1|11,2|12,2|13,3|14,1:318.723:326.675,113.385:0.833449,0.833449:1.42274e-22,0.00208513,0.99792
+chr1	5903515	.	TGTTTTGTTTTGTTT	.	.	.	END=5903529;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999876:3,3:3-3,3-3:16,4,0,0:3,16:NULL:103.791:326.675,113.385:0.0,0.0:0.0,6.71815e-05,0.999934
+chr1	5907759	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5907810;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.942176:25,26:24-26,25-26:7,26,0,24:25,4|26,3:4,1|5,2|6,1|7,3|8,1|10,1|11,1|12,2|13,2|16,1|19,2|20,1|22,1|23,1|24,1|25,3:460.169:326.675,113.385:0.314035,0.429525:0.0225164,0.950009,0.02757
+chr1	5912141	.	TAAATAAATAAA	.	.	.	END=5912152;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:314.115:326.675,113.385:0.0,0.0:0.0,1.17494e-10,1.0
+chr1	5915677	.	CACCACCACCACCAC	.	.	.	END=5915691;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:75,14,0,5:5,75:4,5:454.381:326.675,113.385:0.0,0.0:0.0,8.44432e-23,1.0
+chr1	5915768	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=5915801;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999597:17,17:17-22,17-22:41,25,0,17:16,7|17,30|18,4:4,2|8,1|9,2|10,2|12,1|13,3|14,3|16,2|22,1:583.029:326.675,113.385:2.24099,2.24099:5.98141e-35,8.34372e-06,0.999994
+chr1	5918994	.	CCCTCCCTCCCT	.	.	.	END=5919005;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999354:3,3:3-3,3-3:14,7,0,0:3,14:NULL:117.558:326.675,113.385:0.0,0.0:1e-45,0.00039642,0.999606
+chr1	5919625	.	ATATATATATAT	.	.	.	END=5919636;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999622:6,6:6-7,6-7:15,13,0,0:6,15:NULL:171.564:326.675,113.385:0.195027,0.195027:5.98538e-26,0.000235845,0.999766
+chr1	5919950	.	GATGATGATGAT	.	.	.	END=5919961;RU=gat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:196.784:326.675,113.385:0.0,0.0:0.0,8.43741e-07,1.0
+chr1	5922252	.	ATATATATATATATATATATATATATAT	.	.	.	END=5922279;RU=at;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.620937:14,14:13-15,13-15:5,10,0,0:14,5:NULL:114.364:326.675,113.385:0.421694,0.421694:0.000215381,0.241347,0.758457
+chr1	5926025	.	TCTTTCTTTCTT	.	.	.	END=5926036;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:3,3:3-3,3-3:18,10,0,3:3,18:2,3:188.06:326.675,113.385:0.0,0.0:0.0,1.04438e-05,0.999993
+chr1	5927629	.	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	.	.	.	END=5927700;RU=gatgaa;PERIOD=6;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.844477:12,12:9-12,9-12:6,27,0,19:12,6:2,2|3,3|4,2|5,2|6,1|7,1|8,1|9,4|11,3:411.108:326.675,113.385:0.619742,0.619742:7.03679e-18,0.137528,0.862561
+chr1	5927964	.	ACCCACCCACCC	.	.	.	END=5927975;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.966:326.675,113.385:0.0,0.0:0.0,6.46021e-06,0.999995
+chr1	5929823	.	TTTGTTTGTTTG	.	.	.	END=5929834;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999841:3,3:3-3,3-3:16,2,0,2:3,16:2,2:98.7639:326.675,113.385:0.0,0.0:0.0,6.37898e-05,0.99994
+chr1	5930224	.	GTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=5930247;RU=gtt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:27,13,0,5:8,27:3,1|5,4:263.401:326.675,113.385:0.19802,0.19802:0.0,9.0939e-08,1.0
+chr1	5934390	.	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	.	.	.	END=5934474;RU=tttcc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.199924:17,17:14-17,14-17:2,11,0,11:17,2:3,1|4,2|6,1|9,2|10,3|12,1|13,1:185.373:326.675,113.385:1.49816,1.49816:8.06284e-05,0.626446,0.373523
+chr1	5940366	.	AATTAATTAATT	.	.	.	END=5940377;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999916:3,3:3-3,3-3:17,8,0,0:3,17:NULL:143.032:326.675,113.385:0.0,0.0:0.0,5.15884e-05,0.999949
+chr1	5940451	.	TTTGTTTTGTTTTGT	.	.	.	END=5940465;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:215.504:326.675,113.385:0.0,0.0:0.0,1.34636e-06,1.0
+chr1	5941150	.	ACACACACACAC	.	.	.	END=5941161;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,20,0,3:6,20:4,1|5,2:278.91:326.675,113.385:0.0,0.0:5.56e-43,3.98785e-06,0.999995
+chr1	5942017	.	ACAAAACAAAACAAA	.	.	.	END=5942031;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999954:3,3:3-3,3-3:17,1,0,2:3,17:2,1|3,1:90.8318:326.675,113.385:0.0,0.0:0.0,1.14842e-05,0.999988
+chr1	5945567	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5945590;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,18,0,5:6,22:3,1|4,1|5,3:292.462:326.675,113.385:0.0,0.0:0.0,9.82135e-07,1.0
+chr1	5946795	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5946832;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991405:19,19:4-21,4-21:14,19,0,9:18,2|19,12:5,1|6,1|7,1|8,1|9,1|10,1|12,1|17,1|19,1:315.022:326.675,113.385:7.29921,7.29921:2.95628e-20,0.00747542,0.992543
+chr1	5947011	.	TCCATCCATCCA	.	.	.	END=5947022;RU=tcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,11,0,0:3,31:NULL:223.229:326.675,113.385:0.0,0.0:0.0,2.78806e-09,1.0
+chr1	5953047	.	TCATTCATTCATTCAT	.	.	.	END=5953062;RU=tcat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,12,0,2:4,22:3,2:214.53:326.675,113.385:0.0,0.0:0.0,1.25837e-06,1.0
+chr1	5953771	.	ATTTTATTTTATTTT	.	.	.	END=5953785;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,17,0,2:3,22:2,2:259.852:326.675,113.385:0.0,0.0:0.0,1.55559e-06,1.0
+chr1	5956109	.	AGAGAGAGAGAG	.	.	.	END=5956120;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:19,14,0,2:6,19:4,1|5,1:211.292:326.675,113.385:0.699966,0.699966:1.1e-44,1.05018e-05,0.999993
+chr1	5956842	.	TTCTTTCTTTCT	.	.	.	END=5956853;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:236.194:326.675,113.385:0.0,0.0:0.0,2.68644e-06,1.0
+chr1	5958262	.	GAAGGAAGGAAGGAAGGAAG	.	.	.	END=5958281;RU=gaag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:27,16,0,4:5,27:2,1|4,3:283.017:326.675,113.385:0.0,0.0:0.0,4.85953e-08,1.0
+chr1	5963266	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=5963305;RU=gttt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:24,12,0,17:10,24:3,1|4,2|5,3|6,1|8,5|9,5:336.913:326.675,113.385:0.0,0.0:0.0,2.83696e-07,1.0
+chr1	5964606	.	ATATATATATATAT	.	.	.	END=5964619;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.836108:7,7:4-7,4-7:14,10,0,0:6,3|7,11:NULL:160.179:326.675,113.385:0.862467,0.862467:2.47795e-12,0.162866,0.837207
+chr1	5964620	.	ACACACACACACACACACACAC	.	.	.	END=5964641;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.445205:11,11:9-11,9-11:12,14,0,6:10,3|11,9:4,1|5,1|6,1|9,2|10,1:234.396:326.675,113.385:0.708457,0.708457:2.48055e-09,0.553166,0.44694
+chr1	5969864	.	CCACCCACCCACCCAC	.	.	.	END=5969879;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:33,22,0,2:4,33:3,2:343.641:326.675,113.385:0.0,0.0:0.0,6.62047e-10,1.0
+chr1	5971172	.	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=5971195;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99981:6,6:5-6,5-6:28,17,0,4:5,2|6,26:2,1|3,1|4,1|5,1:310.005:326.675,113.385:0.298675,0.298675:0.0,0.000194253,0.99981
+chr1	5973006	.	ACACACACACAC	.	.	.	END=5973017;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983031:6,6:6-6,6-6:9,6,0,3:6,9:5,3:112.405:326.675,113.385:0.0,0.0:3.2648e-20,0.00572335,0.994293
+chr1	5974638	.	AAATAAATAAAT	.	.	.	END=5974649;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.736692:3,3:1-3,1-3:5,17,0,0:3,5:NULL:171.101:326.675,113.385:0.507951,0.507951:1.13701e-16,0.20747,0.792576
+chr1	5974827	.	ATAATAATAATAATAATA	.	.	.	END=5974844;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996343:6,6:6-6,6-6:11,8,0,4:6,11:3,1|4,2|5,1:152.714:326.675,113.385:0.0,0.0:3.15835e-24,0.00184095,0.998163
+chr1	5974849	.	AAATTAAATTAAATTAAATT	.	.	.	END=5974868;RU=aaatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.964528:4,4:4-4,4-4:8,11,0,2:4,8:2,2:149.833:326.675,113.385:0.19802,0.19802:4.66856e-25,0.0264723,0.973578
+chr1	5976547	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5976566;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993463:4,4:4-4,4-4:10,10,0,2:4,10:3,2:140.83:326.675,113.385:0.0,0.0:3.90347e-33,0.00345787,0.99655
+chr1	5978570	.	AAAGAAAGAAAG	.	.	.	END=5978581;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:187.058:326.675,113.385:0.0,0.0:0.0,1.19858e-08,1.0
+chr1	5981538	.	ATAATAATAATA	.	.	.	END=5981549;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9988:4,4:4-4,4-4:13,11,0,0:4,13:NULL:148.367:326.675,113.385:0.0,0.0:2.02401e-34,0.000860891,0.999142
+chr1	5990630	.	TGGATTATCTGGATTATCTGGATTATC	.	.	.	END=5990656;RU=tggattatc;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,16,0,4:3,22:2,4:261.29:326.675,113.385:0.0,0.0:0.0,2.32205e-06,1.0
+chr1	5990673	.	ACACACACACAC	.	.	.	END=5990684;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,13,0,3:6,20:4,1|5,2:222.117:326.675,113.385:0.0,0.0:1.71735e-39,4.97916e-06,0.999995
+chr1	5991174	.	AAAACAAAACAAAAC	.	.	.	END=5991188;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.705:326.675,113.385:0.0,0.0:0.0,9.51013e-06,0.999993
+chr1	5999275	.	GGGTGGGTGGGT	.	.	.	END=5999286;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.932367:3,3:3-3,3-3:7,44,0,2:3,7:2,2:430.394:326.675,113.385:0.278639,0.278639:6.02717e-20,0.0580408,0.942047
+chr1	6002341	.	AAATAAATAAAT	.	.	.	END=6002352;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990347:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6385:326.675,113.385:0.0,0.0:9.0193e-33,0.00438464,0.995628
+chr1	6003957	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6003980;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993524:6,6:6-6,6-6:11,5,0,0:6,11:NULL:89.6854:326.675,113.385:0.0,0.0:5.95831e-34,0.00386801,0.996142
+chr1	6007179	.	TGTGTGTGTGTGTG	.	.	.	END=6007192;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:7,7:7-7,7-7:19,4,0,0:7,19:NULL:113.025:326.675,113.385:0.0,0.0:2.37576e-35,1.83346e-05,0.999985
+chr1	6008813	.	CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=6008864;RU=ca;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.550003:26,26:25-26,25-26:5,10,0,8:26,5:6,1|7,1|8,1|11,3|13,1|16,1:179.894:326.675,113.385:0.35561,0.35561:3.90968e-06,0.288238,0.711762
+chr1	6010711	.	ATTTATTTATTT	.	.	.	END=6010722;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999907:3,3:3-3,3-3:16,4,0,0:3,16:NULL:100.387:326.675,113.385:0.0,0.0:0.0,5.41553e-05,0.999948
+chr1	6016751	.	CATACATACATA	.	.	.	END=6016762;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999492:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.222:326.675,113.385:0.0,0.0:0.0,0.000290229,0.999712
+chr1	6022355	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6022386;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:24,21,0,12:8,24:3,6|4,1|5,2|6,2|7,1:372.745:326.675,113.385:0.0990099,0.0990099:0.0,5.46256e-07,1.0
+chr1	6023295	.	TTATTTATTTATTTATTTATTTATTTAT	.	.	.	END=6023322;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995703:7,7:7-7,7-7:11,11,0,6:7,11:2,2|3,2|5,1|6,1:183.374:326.675,113.385:0.0,0.0:5.7497e-34,0.00238712,0.997618
+chr1	6023967	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=6023984;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999955:3,3:3-3,3-3:18,18,0,0:3,18:NULL:235.55:326.675,113.385:0.0,0.0:0.0,5.44966e-05,0.999948
+chr1	6025872	.	TTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=6025899;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961678:7,7:7-7,7-7:8,5,0,2:7,8:3,1|6,1:92.9615:326.675,113.385:0.0,0.0:1.86636e-19,0.0193302,0.980711
+chr1	6025930	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6025961;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.66936:15,16:15-17,16-16:10,1,0,4:15,3|16,7:5,1|11,1|13,1|14,1:90.1498:326.675,113.385:0.59653,0.139319:1.76427e-06,0.672544,0.327468
+chr1	6033005	.	TAAATAAATAAA	.	.	.	END=6033016;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999932:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.95:326.675,113.385:0.0,0.0:0.0,3.9076e-05,0.999963
+chr1	6033244	.	ATACATACATACATACATACATACATACATACATAC	.	.	.	END=6033279;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.906221:9,9:9-9,9-9:7,8,0,3:9,7:3,1|4,1|7,1:124.6:326.675,113.385:0.29703,0.29703:3.74206e-17,0.0603248,0.939766
+chr1	6033357	.	ATATATATATATATAT	.	.	.	END=6033372;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987169:8,8:8-8,8-8:10,4,0,0:8,10:NULL:77.138:326.675,113.385:0.0,0.0:2.36841e-16,0.00686831,0.99315
+chr1	6034894	.	GGCAGGCAGGCAGGCA	.	.	.	END=6034909;RU=ggca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.967518:4,4:4-4,4-4:8,9,0,2:4,8:3,2:131.181:326.675,113.385:0.0,0.0:2.16302e-26,0.0180274,0.98201
+chr1	6041090	.	AAAATAAAATAAAAT	.	.	.	END=6041104;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:317.917:326.675,113.385:0.0,0.0:0.0,1.53151e-08,1.0
+chr1	6041134	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6041161;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:28,16,0,8:7,28:2,2|3,3|5,1|6,2:317.829:326.675,113.385:0.278639,0.278639:0.0,3.35055e-08,1.0
+chr1	6041922	.	TTGGTTTGGTTTGGTTTGGT	.	.	.	END=6041941;RU=ttggt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,10,0,5:4,19:2,4|3,1:200.289:326.675,113.385:0.0,0.0:0.0,7.07621e-06,0.999994
+chr1	6041960	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=6041977;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,4,0,0:3,23:NULL:128.968:326.675,113.385:0.0,0.0:0.0,5.73006e-07,1.0
+chr1	6042004	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	.	END=6042038;RU=tttgt;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:19,8,0,7:7,19:2,1|3,1|4,2|5,1|6,1|7,1:201.051:326.675,113.385:0.0,0.0:0.0,4.35751e-06,0.999995
+chr1	6048614	.	AAACAAACAAAC	.	.	.	END=6048625;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:154.817:326.675,113.385:0.0,0.0:0.0,2.35957e-05,0.999979
+chr1	6051144	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=6051171;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-8,7-8:26,7,0,6:7,26:4,1|6,5:217.953:326.675,113.385:0.21692,0.21692:0.0,3.26809e-08,1.0
+chr1	6056382	.	CCTCCTCCTCCTCCT	.	.	.	END=6056396;RU=cct;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98372:5,5:5-5,5-5:10,17,0,0:5,10:NULL:192.524:326.675,113.385:0.0,0.0:3.52835e-29,0.0132492,0.986779
+chr1	6056414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6056441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997307:7,7:7-7,7-7:11,14,0,13:7,11:3,3|4,1|5,3|6,6:268.22:326.675,113.385:0.0,0.0:5.31752e-33,0.00134459,0.998662
+chr1	6059464	.	AAAAACAAAAACAAAAAC	.	.	.	END=6059481;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,16,0,0:3,28:NULL:260.005:326.675,113.385:0.0,0.0:0.0,5.9262e-08,1.0
+chr1	6059973	.	AAATAAATAAAT	.	.	.	END=6059984;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.651:326.675,113.385:0.0,0.0:0.0,1.0502e-05,0.999993
+chr1	6061243	.	AGAGAGAGAGAG	.	.	.	END=6061254;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:26,14,0,3:6,26:5,3:249.986:326.675,113.385:0.339533,0.339533:0.0,6.44112e-08,1.0
+chr1	6062647	.	GTGGGTGGGTGG	.	.	.	END=6062658;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997682:3,3:3-3,3-3:12,23,0,0:3,12:NULL:249.551:326.675,113.385:0.0,0.0:5.23451e-40,0.00149923,0.998505
+chr1	6062751	.	TAAATAAATAAA	.	.	.	END=6062762;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997745:3,3:3-3,3-3:12,4,0,0:3,12:NULL:82.2321:326.675,113.385:0.0,0.0:9.1662e-41,0.00103777,0.998967
+chr1	6066036	.	CTCTGTCTCTGTCTCTGT	.	.	.	END=6066053;RU=ctctgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.554:326.675,113.385:0.0,0.0:0.0,2.05396e-07,1.0
+chr1	6072915	.	AATAATAATAATAATAATAATAATAATAATAATAATAAT	.	.	.	END=6072953;RU=aat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930029:13,13:12-14,12-14:8,9,0,5:13,8:4,1|5,1|6,2|7,1:152.319:326.675,113.385:0.53502,0.53502:5.64677e-12,0.0433137,0.956757
+chr1	6077184	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=6077227;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.755053:22,22:18-22,18-22:6,5,0,8:22,6:6,1|14,2|15,1|17,2|18,1|21,1:133.559:326.675,113.385:1.92222,1.92222:5.48777e-09,0.0867559,0.913343
+chr1	6080857	.	AAACAAACAAACAAACAAAC	.	.	.	END=6080876;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976075:5,5:5-5,5-5:8,5,0,8:5,8:2,1|3,2|4,5:135.037:326.675,113.385:0.0,0.0:7.29175e-27,0.00865998,0.991359
+chr1	6083873	.	AATAAATAAATA	.	.	.	END=6083884;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994711:3,3:3-3,3-3:10,16,0,2:3,10:2,1|3,1:207.602:326.675,113.385:0.0,0.0:3.33485e-40,0.00209673,0.997912
+chr1	6084220	.	ATTTATTTATTT	.	.	.	END=6084231;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998322:3,3:3-3,3-3:13,6,0,0:3,13:NULL:109.814:326.675,113.385:0.0,0.0:1.01883e-32,0.000871197,0.999134
+chr1	6085465	.	TAATAATAATAATAA	.	.	.	END=6085479;RU=taa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996344:5,5:5-5,5-5:12,6,0,0:5,12:NULL:103.466:326.675,113.385:0.0,0.0:8.40892e-32,0.00230582,0.997701
+chr1	6085756	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6085801;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.811173:23,23:23-23,23-23:6,13,0,10:23,6:5,1|8,2|10,1|11,2|14,1|19,1|22,2:226.27:326.675,113.385:0.0,0.0:6.11263e-08,0.0622423,0.937851
+chr1	6086268	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=6086299;RU=tc;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.86262:16,16:16-16,16-16:6,6,0,5:16,6:4,1|5,1|14,1|15,1|16,1:123.14:326.675,113.385:0.0,0.0:4.58227e-17,0.0297807,0.970274
+chr1	6087008	.	TATTTATTTATT	.	.	.	END=6087019;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999661:3,3:3-3,3-3:15,3,0,0:3,15:NULL:85.7931:326.675,113.385:0.0,0.0:0.0,0.000154233,0.999849
+chr1	6092499	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6092524;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999858:13,13:13-13,13-13:17,10,0,6:13,17:6,1|7,1|10,2|11,1|13,1:210.266:326.675,113.385:0.19802,0.19802:4.57521e-30,4.70373e-05,0.999955
+chr1	6093013	.	CACACACACACACA	.	.	.	END=6093026;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.421024:7,7:5-7,5-7:3,9,0,2:7,3:5,2:109.583:326.675,113.385:0.575281,0.575281:6.83108e-05,0.324228,0.675718
+chr1	6098593	.	CTAGAACTAGAACTAGAA	.	.	.	END=6098610;RU=ctagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999799:3,3:3-3,3-3:15,8,0,2:3,15:2,2:146.151:326.675,113.385:0.0,0.0:0.0,9.13691e-05,0.99991
+chr1	6099223	.	TTGGTTGGTTGG	.	.	.	END=6099234;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999602:3,3:1-3,1-3:15,15,0,0:3,15:NULL:196.668:326.675,113.385:0.913899,0.913899:0.0,0.000276285,0.999727
+chr1	6099488	.	CCCACCCACCCA	.	.	.	END=6099499;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,13,0,0:3,18:NULL:188.538:326.675,113.385:0.0,0.0:0.0,2.42689e-05,0.999978
+chr1	6099665	.	TTGTTTGTTTGTTTGTTTGTTTGT	.	.	.	END=6099688;RU=ttgt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,16,0,5:6,23:2,1|3,2|4,1|5,1:276.875:326.675,113.385:0.0,0.0:0.0,1.05494e-06,1.0
+chr1	6102505	.	CAACAACAACAA	.	.	.	END=6102516;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999977:4,4:4-4,4-4:18,18,0,0:4,18:NULL:228.586:326.675,113.385:0.0,0.0:0.0,3.11281e-05,0.999971
+chr1	6107421	.	AAATAAATAAAT	.	.	.	END=6107432;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.826:326.675,113.385:0.0,0.0:0.0,4.03319e-06,0.999995
+chr1	6108219	.	CACACACACACACACACACACACACACACACACACACA	.	.	.	END=6108256;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993249:19,19:19-20,19-20:25,18,0,18:17,2|19,20|20,3:4,2|5,3|7,1|8,1|9,1|10,1|11,3|13,1|14,2|15,2|18,1:429.764:326.675,113.385:0.29703,0.29703:1.847e-21,6.9518e-05,0.999933
+chr1	6108461	.	AGAGAGAGAGAGAGAG	.	.	.	END=6108476;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99941:8,8:8-8,8-8:15,10,0,0:8,15:NULL:150.292:326.675,113.385:0.139319,0.139319:3.98759e-33,0.000372694,0.999629
+chr1	6109390	.	CACCCACCCACC	.	.	.	END=6109401;RU=cacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:2-3,2-3:24,13,0,0:3,24:NULL:212.488:326.675,113.385:0.298675,0.298675:0.0,4.71475e-07,1.0
+chr1	6109799	.	AAATAAATAAAT	.	.	.	END=6109810;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.156:326.675,113.385:0.0,0.0:0.0,1.66408e-07,1.0
+chr1	6109840	.	CAACAACAACAA	.	.	.	END=6109851;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:156.084:326.675,113.385:0.0,0.0:0.0,7.19318e-06,0.999994
+chr1	6110101	.	AAATAAATAAAT	.	.	.	END=6110112;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999394:3,3:3-3,3-3:14,5,0,0:3,14:NULL:97.881:326.675,113.385:0.0,0.0:8.52e-43,0.000282072,0.99972
+chr1	6114158	.	AATAAATAAATA	.	.	.	END=6114169;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.767742:3,3:3-3,3-3:5,7,0,0:3,5:NULL:81.3956:326.675,113.385:0.0,0.0:3.77461e-12,0.127857,0.872242
+chr1	6118166	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6118197;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98645:16,16:16-17,16-17:10,9,0,12:16,10:5,1|6,2|9,1|10,3|12,1|13,1|14,3:227.308:326.675,113.385:0.345543,0.345543:5.24999e-15,0.00639446,0.993618
+chr1	6118512	.	TTCAATTCAATTCAATTCAA	.	.	.	END=6118531;RU=ttcaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99998:4,4:4-4,4-4:18,9,0,4:4,18:3,4:184.02:326.675,113.385:0.0,0.0:0.0,1.38592e-05,0.999987
+chr1	6122082	.	AAAACAAAACAAAAC	.	.	.	END=6122096;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:207.671:326.675,113.385:0.0,0.0:0.0,1.27218e-05,0.999987
+chr1	6124347	.	TAAATAAATAAATAAATAAA	.	.	.	END=6124366;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,5,0,0:5,22:NULL:138.504:326.675,113.385:0.0,0.0:0.0,1.54925e-06,1.0
+chr1	6126323	.	AATCAATCAATCAATCAATCAATCAATCAATC	.	.	.	END=6126354;RU=aatc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999059:8,8:8-8,8-8:13,5,0,7:8,13:2,1|4,1|5,1|6,2|7,2:152.492:326.675,113.385:0.0,0.0:1.43201e-31,0.000422655,0.999582
+chr1	6130083	.	AAATCAAATCAAATC	.	.	.	END=6130097;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999472:3,3:3-3,3-3:14,9,0,0:3,14:NULL:144.783:326.675,113.385:0.0,0.0:0.0,0.000341248,0.99966
+chr1	6131636	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=6131675;RU=atag;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984166:10,10:10-10,10-10:9,8,0,8:10,9:2,1|4,1|5,1|7,1|8,1|9,3:173.745:326.675,113.385:0.0,0.0:5.2531e-22,0.00554703,0.994467
+chr1	6132801	.	TTGGTTGGTTGGTTGG	.	.	.	END=6132816;RU=ttgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:4,4:4-4,4-4:18,14,0,5:4,18:2,1|3,4:230.985:326.675,113.385:0.0,0.0:0.0,1.08062e-05,0.999993
+chr1	6133624	.	AAATAAATAAAT	.	.	.	END=6133635;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994882:3,3:3-3,3-3:11,5,0,0:3,11:NULL:92.3692:326.675,113.385:0.0,0.0:1.38372e-34,0.002219,0.99779
+chr1	6134579	.	AAATAAAATAAAATA	.	.	.	END=6134593;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:177.07:326.675,113.385:0.0,0.0:0.0,4.22136e-06,0.999995
+chr1	6134731	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=6134782;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.429794:26,26:25-26,25-26:6,18,0,9:25,2|26,4:5,1|6,1|7,1|11,1|12,1|15,1|21,1|26,2:270.245:326.675,113.385:0.472558,0.472558:8.09277e-19,0.522431,0.47766
+chr1	6136631	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=6136660;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.636075:15,15:14-16,14-16:25,16,0,7:13,2|14,6|15,14|16,3:5,1|6,1|8,1|11,1|14,3:338.333:326.675,113.385:0.673122,0.673122:3.52494e-13,0.351759,0.648281
+chr1	6137129	.	TATTATTATTAT	.	.	.	END=6137140;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999578:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.607:326.675,113.385:0.0,0.0:1.757e-41,0.000238084,0.999765
+chr1	6137380	.	TTGTTTGTTTGT	.	.	.	END=6137391;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:183.108:326.675,113.385:0.0,0.0:0.0,8.06194e-09,1.0
+chr1	6137986	.	TGCATGCATGCA	.	.	.	END=6137997;RU=tgca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994469:3,3:3-3,3-3:11,7,0,0:3,11:NULL:116.139:326.675,113.385:0.0,0.0:7.27824e-38,0.00322665,0.996784
+chr1	6142183	.	AAACAAACAAACAAAC	.	.	.	END=6142198;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:23,17,0,2:4,23:3,2:263.53:326.675,113.385:0.0,0.0:0.0,9.19229e-07,1.0
+chr1	6144901	.	GAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=6144922;RU=ga;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999973:11,11:11-11,11-11:25,13,0,4:10,2|11,23:6,1|7,1|10,2:261.614:326.675,113.385:0.0,0.0:1.5765e-36,3.36838e-05,0.99997
+chr1	6153283	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=6153306;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999981:6,6:6-6,6-6:18,5,0,2:6,18:4,1|5,1:133.222:326.675,113.385:0.0,0.0:0.0,1.21902e-05,0.999987
+chr1	6153696	.	AACTAACTAACT	.	.	.	END=6153707;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989695:3,3:3-3,3-3:10,4,0,0:3,10:NULL:76.5681:326.675,113.385:0.0,0.0:1.32747e-32,0.00489523,0.995116
+chr1	6156105	.	GGTGGTGGTGGT	.	.	.	END=6156116;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:245.438:326.675,113.385:0.0,0.0:0.0,4.38061e-08,1.0
+chr1	6156235	.	AAACAAACAAACAAACAAAC	.	.	.	END=6156254;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.947843:5,5:5-5,5-5:9,18,0,0:5,9:NULL:205.243:326.675,113.385:0.0,0.0:1.78488e-25,0.0429236,0.957147
+chr1	6157851	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=6157890;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.752279:20,20:17-20,17-20:12,9,0,5:17,2|20,10:4,1|10,1|11,1|17,1|20,1:183.179:326.675,113.385:1.30783,1.30783:1.61306e-21,0.24328,0.756734
+chr1	6158692	.	AGCAGCAGCAGC	.	.	.	END=6158703;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,19,0,0:4,26:NULL:279.647:326.675,113.385:0.0,0.0:0.0,1.50567e-07,1.0
+chr1	6158961	.	GTGGTGGTGGTG	.	.	.	END=6158972;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,21,0,2:4,30:3,2:321.545:326.675,113.385:0.0,0.0:0.0,4.70615e-09,1.0
+chr1	6160096	.	TACATACATACA	.	.	.	END=6160107;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:231.279:326.675,113.385:0.0,0.0:0.0,9.43314e-08,1.0
+chr1	6160598	.	AATAAATAAATA	.	.	.	END=6160609;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:225.602:326.675,113.385:0.0,0.0:0.0,3.47456e-07,1.0
+chr1	6162049	.	CCACCACCACCA	.	.	.	END=6162060;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:177.09:326.675,113.385:0.0,0.0:0.0,7.64484e-06,0.999994
+chr1	6163104	.	TTTGTTTGTTTG	.	.	.	END=6163115;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:262.632:326.675,113.385:0.0,0.0:0.0,2.08384e-07,1.0
+chr1	6178405	.	ATAAAATAAAATAAA	.	.	.	END=6178419;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:229.543:326.675,113.385:0.0,0.0:0.0,4.18841e-07,1.0
+chr1	6178663	.	GACCTGACCTGACCT	.	.	.	END=6178677;RU=gacct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,6,0,3:3,25:2,3:175.922:326.675,113.385:0.0,0.0:0.0,1.12569e-07,1.0
+chr1	6180765	.	TAAATAAATAAA	.	.	.	END=6180776;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.936818:3,3:3-3,3-3:7,5,0,2:3,7:2,2:84.2429:326.675,113.385:0.0,0.0:5.72889e-23,0.0212536,0.978789
+chr1	6188010	.	TTTAATTTAATTTAA	.	.	.	END=6188024;RU=tttaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999711:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.999:326.675,113.385:0.0,0.0:0.0,0.000179156,0.999825
+chr1	6190661	.	AAATAAATAAAT	.	.	.	END=6190672;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:19,15,0,0:3,19:NULL:211.052:326.675,113.385:0.0,0.0:0.0,1.27372e-05,0.999987
+chr1	6191823	.	AACAAACAAACA	.	.	.	END=6191834;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999944:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.552:326.675,113.385:0.0,0.0:0.0,3.98189e-05,0.999963
+chr1	6193268	.	CAACAACAACAACAA	.	.	.	END=6193282;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:5,5:5-5,5-5:18,13,0,3:5,18:4,3:208.346:326.675,113.385:0.0,0.0:0.0,1.1307e-05,0.999993
+chr1	6194222	.	AACAAAAACAAAAACAAAAACAAA	.	.	.	END=6194245;RU=aacaaa;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:24,8,0,7:4,24:2,1|3,6:217.741:326.675,113.385:0.253975,0.253975:0.0,1.443e-07,1.0
+chr1	6196714	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6196751;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.816281:19,19:18-19,18-19:9,5,0,5:18,2|19,7:6,2|15,2|17,1:128.555:326.675,113.385:0.311527,0.311527:3.19036e-07,0.158704,0.84137
+chr1	6197125	.	GTTTGTTTGTTTGTTT	.	.	.	END=6197140;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,14,0,6:4,20:2,1|3,5:244.8:326.675,113.385:0.0,0.0:2.10572e-29,4.70157e-06,0.999995
+chr1	6197608	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6197647;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.965823:20,20:19-20,19-20:13,18,0,17:19,2|20,11:5,3|9,2|10,2|11,2|12,1|15,1|16,1|18,3|19,2:365.533:326.675,113.385:0.236383,0.236383:1.13737e-10,0.0318096,0.968249
+chr1	6197805	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=6197822;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,18,0,0:3,39:NULL:320.576:326.675,113.385:0.0,0.0:0.0,1.62659e-11,1.0
+chr1	6198434	.	CACACACACACACA	.	.	.	END=6198447;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:25,5,0,0:7,25:NULL:144.648:326.675,113.385:0.0,0.0:3e-45,2.28277e-07,1.0
+chr1	6199733	.	TTATTTATTTAT	.	.	.	END=6199744;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,17,0,3:3,22:2,3:268.516:326.675,113.385:0.0,0.0:0.0,8.0634e-07,1.0
+chr1	6203219	.	AAACAAACAAAC	.	.	.	END=6203230;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:183.432:326.675,113.385:0.0,0.0:0.0,2.854e-06,1.0
+chr1	6207701	.	GTTTGTTTGTTT	.	.	.	END=6207712;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.425:326.675,113.385:0.0,0.0:0.0,8.11456e-07,1.0
+chr1	6208513	.	GTTGTTGTTGTT	.	.	.	END=6208524;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:151.135:326.675,113.385:0.0,0.0:0.0,9.37241e-06,0.999993
+chr1	6208671	.	TTATTTTTATTTTTATTT	.	.	.	END=6208688;RU=ttattt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99963:3,3:3-3,3-3:14,10,0,2:3,14:2,1|3,1:162.315:326.675,113.385:0.0,0.0:0.0,0.000182714,0.999819
+chr1	6210401	.	TTTGTTTGTTTG	.	.	.	END=6210412;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998483:3,3:3-3,3-3:12,5,0,3:3,12:2,3:116.13:326.675,113.385:0.0,0.0:8.19467e-38,0.000558929,0.999445
+chr1	6219473	.	GTTTGTTTGTTTGTTT	.	.	.	END=6219488;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,17,0,0:4,21:NULL:254.168:326.675,113.385:0.0,0.0:0.0,7.24935e-06,0.999994
+chr1	6219491	.	ATTTATTTATTT	.	.	.	END=6219502;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,17,0,3:3,25:2,3:289.229:326.675,113.385:0.0,0.0:0.0,1.11238e-07,1.0
+chr1	6224070	.	GTGTGTGTGTGT	.	.	.	END=6224081;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,10,0,2:6,21:5,2:185.081:326.675,113.385:0.0,0.0:0.0,1.72515e-06,1.0
+chr1	6226500	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6226537;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997486:19,19:18-19,18-19:24,9,0,7:18,5|19,19:6,1|9,1|12,1|13,1|14,1|15,1|18,1:259.282:326.675,113.385:0.5093,0.5093:7.5948e-22,0.00251275,0.997495
+chr1	6226712	.	TTTGTTTGTTTGTTTG	.	.	.	END=6226727;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,16,0,5:4,24:2,1|3,4:275.322:326.675,113.385:0.0,0.0:0.0,1.73189e-07,1.0
+chr1	6227414	.	TTGTTTGTTTGT	.	.	.	END=6227425;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:212.816:326.675,113.385:0.0,0.0:0.0,4.12816e-06,0.999995
+chr1	6228918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6228955;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.323881:19,19:19-22,19-22:3,6,0,11:19,3:4,1|6,3|11,2|15,2|16,1|18,2:155.522:326.675,113.385:1.40014,1.40014:0.000263973,0.159522,0.840288
+chr1	6229792	.	CAAAACAAAACAAAACAAAACAAAA	.	.	.	END=6229816;RU=caaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959818:5,5:5-5,5-5:8,6,0,2:5,8:2,1|3,1:100.318:326.675,113.385:0.0,0.0:1.16675e-24,0.0229229,0.977121
+chr1	6231061	.	GTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6231082;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999295:11,11:9-12,9-12:22,10,0,6:11,20|12,2:5,1|6,2|9,1|10,2:232.667:326.675,113.385:0.410145,0.410145:5.22495e-29,2.21999e-06,1.0
+chr1	6232825	.	TTTGTTTGTTTG	.	.	.	END=6232836;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.983:326.675,113.385:0.0,0.0:0.0,7.29909e-07,1.0
+chr1	6232863	.	TTTGTTTGTTTG	.	.	.	END=6232874;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,8,0,3:3,22:2,3:182.425:326.675,113.385:0.0,0.0:0.0,7.23581e-07,1.0
+chr1	6232977	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=6232994;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:200.399:326.675,113.385:0.0,0.0:0.0,7.36549e-07,1.0
+chr1	6233703	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6233722;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995233:4,4:4-4,4-4:11,11,0,3:4,11:2,1|3,2:169.752:326.675,113.385:0.0,0.0:3.18555e-30,0.00296114,0.997048
+chr1	6236385	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6236434;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.477729:25,25:24-25,24-25:7,14,0,10:24,2|25,5:7,1|9,1|10,1|11,2|16,1|19,2|23,1|24,1:242.309:326.675,113.385:0.452422,0.452422:2.07637e-05,0.478374,0.521694
+chr1	6238596	.	ATTATTATTATT	.	.	.	END=6238607;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999393:4,4:4-4,4-4:15,14,0,0:4,15:NULL:194.976:326.675,113.385:0.0,0.0:2.88657e-37,0.000419021,0.999583
+chr1	6239066	.	TTTGTTTGTTTG	.	.	.	END=6239077;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999785:3,3:3-3,3-3:15,11,0,3:3,15:2,3:182.834:326.675,113.385:0.0,0.0:1.56924e-40,0.00010514,0.999896
+chr1	6240390	.	GTGCGTGCGTGC	.	.	.	END=6240401;RU=gtgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:173.043:326.675,113.385:0.0,0.0:0.0,6.06587e-06,0.999994
+chr1	6247906	.	TGTTGTTGTTGTTGT	.	.	.	END=6247920;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:24,11,0,2:5,24:3,1|4,1:216.699:326.675,113.385:0.236383,0.236383:0.0,4.22916e-07,1.0
+chr1	6250708	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=6250725;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999563:6,6:6-6,6-6:15,9,0,2:6,15:3,1|5,1:161.233:326.675,113.385:0.0,0.0:1.7459e-41,0.000263725,0.999736
+chr1	6250858	.	TATGTATGTATGTATG	.	.	.	END=6250873;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994009:4,4:3-4,3-4:21,9,0,2:3,2|4,19:3,2:192.209:326.675,113.385:0.419363,0.419363:0.0,0.00601312,0.994001
+chr1	6251852	.	AAATAAATAAAT	.	.	.	END=6251863;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.405:326.675,113.385:0.0,0.0:0.0,6.98634e-05,0.999933
+chr1	6252245	.	ATATATATATATATAT	ATATATATAT	.	.	END=6252260;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0176847:5,5:5-9,5-9:0,5,0,0:NULL:NULL:43.6947:326.675,113.385:1.38875,1.38875:0.375284,0.481424,0.14336
+chr1	6252276	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATAT	.	.	END=6252315;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0197936:17,17:1-17,1-17:0,4,0,3:NULL:5,1|8,1|17,1:59.9756:326.675,113.385:5.72911,5.72911:0.76738,0.225041,0.00762246
+chr1	6260354	.	TAAATAAATAAA	.	.	.	END=6260365;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.565:326.675,113.385:0.0,0.0:0.0,1.0302e-05,0.999993
+chr1	6266174	.	TTGTTTTGTTTTGTTTTGTTTTGTT	.	.	.	END=6266198;RU=ttgtt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999863:5,5:5-5,5-5:16,9,0,4:5,16:3,4:176.745:326.675,113.385:0.0,0.0:5.2806e-34,0.00010021,0.999902
+chr1	6267793	.	TGTTTGTTTGTT	.	.	.	END=6267804;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.408:326.675,113.385:0.0,0.0:0.0,2.42279e-06,1.0
+chr1	6269522	.	GTTGTTGTTGTT	.	.	.	END=6269533;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,15,0,2:4,22:3,2:240.943:326.675,113.385:0.0,0.0:0.0,1.42327e-06,1.0
+chr1	6269576	.	GATAGGATAGGATAG	.	.	.	END=6269590;RU=gatag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:218.717:326.675,113.385:0.0,0.0:0.0,7.19534e-08,1.0
+chr1	6271401	.	TCATCATCATCA	.	.	.	END=6271412;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:121.848:326.675,113.385:0.0,0.0:0.0,7.85478e-06,0.999994
+chr1	6273501	.	TTCATTCATTCA	.	.	.	END=6273512;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999431:3,3:3-3,3-3:14,5,0,0:3,14:NULL:101.03:326.675,113.385:0.0,0.0:7.8e-44,0.000273069,0.999728
+chr1	6273618	.	ACCCACCCACCC	.	.	.	END=6273629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989861:3,3:3-3,3-3:10,11,0,0:3,10:NULL:134.88:326.675,113.385:0.0,0.0:7.59975e-27,0.00483192,0.995182
+chr1	6274375	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=6274394;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,7,0,4:5,26:3,1|4,3:196.057:326.675,113.385:0.0,0.0:0.0,4.63645e-08,1.0
+chr1	6276992	.	ATGATGATGATG	.	.	.	END=6277003;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,11,0,0:4,22:NULL:185.686:326.675,113.385:0.0,0.0:0.0,2.22016e-06,1.0
+chr1	6277038	.	AGCAGCAGCAGC	.	.	.	END=6277049;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:23,10,0,0:4,23:NULL:184.665:326.675,113.385:0.0,0.0:0.0,1.51151e-06,1.0
+chr1	6285646	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6285691;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.742702:23,23:22-24,22-24:14,13,0,20:22,3|23,9|24,2:5,2|6,1|7,1|8,1|9,1|12,1|14,1|15,3|16,1|17,3|18,1|21,1|22,1|23,2:352.699:326.675,113.385:0.561134,0.561134:1.89285e-24,0.0129286,0.987098
+chr1	6290853	.	TCCTTCCTTCCT	.	.	.	END=6290864;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,20,0,0:3,32:NULL:317.715:326.675,113.385:0.0,0.0:0.0,4.87576e-09,1.0
+chr1	6293821	.	CTCCCTCCCTCC	.	.	.	END=6293832;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:218.038:326.675,113.385:0.0,0.0:0.0,9.94156e-08,1.0
+chr1	6301879	.	AATAAATAAATA	.	.	.	END=6301890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,17,0,2:3,23:2,2:261.177:326.675,113.385:0.0,0.0:0.0,3.68189e-07,1.0
+chr1	6303590	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6303631;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.873441:21,23:21-21,20-23:14,13,0,24:20,3|21,9|22,2:4,1|5,1|6,2|7,1|8,1|9,3|10,1|11,2|13,1|15,3|16,2|18,1|19,1|20,3|23,1:393.598:326.675,113.385:0.0990099,1.0187:1.21109e-14,2.029e-06,1.0
+chr1	6311549	.	GGTGGTGGTGGT	.	.	.	END=6311560;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999576:4,4:4-4,4-4:15,10,0,0:4,15:NULL:155.49:326.675,113.385:0.0,0.0:0.0,0.000278707,0.999721
+chr1	6312247	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	.	END=6312294;RU=tccc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.519107:12,12:11-12,11-12:4,6,0,5:12,4:3,1|4,2|8,1|10,1:109.704:326.675,113.385:0.486863,0.486863:3.2532e-09,0.268059,0.731941
+chr1	6312789	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=6312844;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.233564:28,28:25-29,25-29:2,11,0,12:28,2:6,1|7,1|8,1|12,1|13,1|14,1|19,1|21,2|26,1|27,1|28,1:211.077:326.675,113.385:1.44649,1.44649:1.4493e-10,0.228072,0.771956
+chr1	6317256	.	AAAAACAAAAACAAAAAC	.	.	.	END=6317273;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,7,0,0:3,29:NULL:180.098:326.675,113.385:0.0,0.0:0.0,1.09115e-08,1.0
+chr1	6324793	.	TTATTTATTTAT	.	.	.	END=6324804;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999899:3,3:3-3,3-3:16,5,0,3:3,16:2,3:131.718:326.675,113.385:0.0,0.0:0.0,3.49466e-05,0.999964
+chr1	6326106	.	CTGCTGCTGCTG	.	.	.	END=6326117;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999879:4,4:4-4,4-4:17,15,0,0:4,17:NULL:206.579:326.675,113.385:0.0,0.0:0.0,9.01237e-05,0.999911
+chr1	6328025	.	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	.	.	.	END=6328108;RU=tccctc;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.276711:14,14:11-14,11-14:2,7,0,10:14,2:2,1|4,1|5,1|6,1|7,2|9,1|10,1|12,1|13,1:148.089:326.675,113.385:0.927845,0.927845:0.00346715,0.435722,0.560919
+chr1	6329503	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6329524;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.355466:11,11:10-11,10-11:20,21,0,7:10,5|11,15:4,1|6,1|8,2|10,2|11,1:344.554:326.675,113.385:0.516562,0.516562:1.06726e-25,0.644578,0.355461
+chr1	6330314	.	TGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6330337;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999663:12,12:12-12,12-12:16,15,0,4:12,16:7,2|11,2:241.719:326.675,113.385:0.0,0.0:9.40051e-21,0.000149188,0.99985
+chr1	6332594	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=6332633;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999945:8,8:8-8,8-8:17,12,0,10:8,17:3,2|4,1|5,3|6,2|7,2:256.922:326.675,113.385:0.0,0.0:0.0,3.51892e-05,0.999964
+chr1	6332921	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=6332940;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:20,7,0,4:4,20:3,4:174.049:326.675,113.385:0.0,0.0:0.0,2.65643e-06,1.0
+chr1	6341827	.	TTTATTTATTTATTTATTTA	.	.	.	END=6341846;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997836:5,5:5-5,5-5:12,11,0,8:5,12:3,3|4,5:204.514:326.675,113.385:0.0,0.0:6.80122e-33,0.000836161,0.999166
+chr1	6345062	.	TATTATTATTATTATTATTATTATTATTAT	.	.	.	END=6345091;RU=tat;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.71864:10,10:9-10,9-10:11,7,0,3:9,2|10,9:7,3:136.316:326.675,113.385:0.452422,0.452422:3.92122e-13,0.278474,0.721527
+chr1	6347126	.	ATTTATTTATTT	.	.	.	END=6347137;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-4,3-4:21,8,0,0:3,21:NULL:157.025:326.675,113.385:0.21692,0.21692:0.0,2.56255e-06,1.0
+chr1	6348865	.	TTGTTGTTGTTGTTG	.	.	.	END=6348879;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:27,9,0,5:5,27:4,5:225.486:326.675,113.385:0.0,0.0:0.0,1.41317e-08,1.0
+chr1	6354453	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=6354502;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.614482:25,25:19-25,19-25:8,17,0,10:24,2|25,6:5,2|6,1|7,1|13,1|17,1|19,1|20,2|22,1:280.44:326.675,113.385:2.29536,2.29536:5.97258e-07,0.33895,0.661073
+chr1	6354954	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6354981;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.801285:13,14:13-14,14-14:12,8,0,4:13,4|14,8:7,1|8,2|11,1:159.248:326.675,113.385:0.494455,0.0:1.73115e-09,0.801783,0.198264
+chr1	6355000	.	AGGCAGGCAGGC	.	.	.	END=6355011;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:3,3:3-3,3-3:18,11,0,3:3,18:2,3:190.865:326.675,113.385:0.0,0.0:0.0,1.01497e-05,0.999993
+chr1	6357634	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6357691;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.132999:28,28:17-29,17-29:2,8,0,11:28,2:5,1|10,1|11,1|13,3|15,1|17,1|20,1|21,2:172.541:326.675,113.385:5.3983,5.3983:0.748314,0.241926,0.00978573
+chr1	6359367	.	CTGCTGCTGCTG	.	.	.	END=6359378;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:39,22,0,0:4,39:NULL:362.516:326.675,113.385:0.0,0.0:0.0,4.16911e-11,1.0
+chr1	6368193	.	CATCATCATCAT	.	.	.	END=6368204;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-5,4-5:30,8,0,0:4,30:NULL:188.186:326.675,113.385:0.236383,0.236383:0.0,7.14351e-09,1.0
+chr1	6368347	.	TTTATTTATTTATTTATTTA	.	.	.	END=6368366;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997218:5,5:5-5,5-5:12,18,0,0:5,12:NULL:207.885:326.675,113.385:0.0,0.0:1.13771e-33,0.00223835,0.997768
+chr1	6371007	.	AGGTAGGTAGGT	.	.	.	END=6371018;RU=aggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:259.845:326.675,113.385:0.0,0.0:0.0,1.20261e-07,1.0
+chr1	6371335	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=6371382;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.026833:23,23:21-25,21-25:0,3,0,0:NULL:NULL:31.1618:326.675,113.385:0.859164,0.859164:0.231877,0.505364,0.262804
+chr1	6379206	.	AAACAAACAAAC	.	.	.	END=6379217;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,11,0,0:3,36:NULL:244.338:326.675,113.385:0.0,0.0:0.0,7.01717e-11,1.0
+chr1	6379384	.	TGTTTTGTTTTGTTT	.	.	.	END=6379398;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,7,0,3:3,19:2,3:161.935:326.675,113.385:0.0,0.0:0.0,4.73307e-06,0.999995
+chr1	6386715	.	GCCAGCCAGCCA	.	.	.	END=6386726;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:170.238:326.675,113.385:0.0,0.0:0.0,2.20524e-06,1.0
+chr1	6389231	.	TGAGAATGAGAATGAGAA	.	.	.	END=6389248;RU=tgagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:227.167:326.675,113.385:0.0,0.0:0.0,1.66007e-06,1.0
+chr1	6390202	.	TATATATATATATATATATATA	.	.	.	END=6390223;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.886395:11,11:11-11,11-11:7,4,0,0:11,7:NULL:68.6352:326.675,113.385:0.0,0.0:7.10004e-08,0.0573829,0.942704
+chr1	6390677	.	ACATACATACATACATACATACATACATACAT	.	.	.	END=6390708;RU=acat;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999966:8,8:8-8,8-8:18,16,0,6:8,18:3,2|6,2|7,2:261.855:326.675,113.385:0.0,0.0:2.71797e-36,3.02089e-05,0.999971
+chr1	6391128	.	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG	.	.	.	END=6391159;RU=tctg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998722:8,8:8-8,8-8:13,5,0,6:8,13:2,1|3,3|4,1|6,1:142.657:326.675,113.385:0.0,0.0:3.41302e-38,0.000658743,0.999346
+chr1	6391479	.	CAAACAAACAAA	.	.	.	END=6391490;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:213.709:326.675,113.385:0.0,0.0:0.0,4.31277e-07,1.0
+chr1	6394101	.	AAAACAAAACAAAAC	.	.	.	END=6394115;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,9,0,2:3,18:2,2:166.137:326.675,113.385:0.0,0.0:0.0,1.259e-05,0.999987
+chr1	6403250	.	TGTTTGTTTGTT	.	.	.	END=6403261;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998589:3,3:3-3,3-3:12,8,0,3:3,12:2,3:146.182:326.675,113.385:0.0,0.0:1.93543e-40,0.000508567,0.999493
+chr1	6410410	.	CCACCCCCACCCCCACCC	.	.	.	END=6410427;RU=ccaccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999862:3,3:3-3,3-3:17,20,0,0:3,17:NULL:262.94:326.675,113.385:0.0,0.0:0.0,0.000146166,0.999857
+chr1	6411672	.	CCACCACCACCA	.	.	.	END=6411683;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984921:4,4:4-4,4-4:10,14,0,0:4,10:NULL:168.232:326.675,113.385:0.0,0.0:1.06299e-23,0.0104089,0.989612
+chr1	6412880	.	TATGTATGTATG	.	.	.	END=6412891;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:151.166:326.675,113.385:0.0,0.0:0.0,2.57264e-07,1.0
+chr1	6415172	.	TATATATATATATATATATATA	.	.	.	END=6415193;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.571699:11,11:7-11,7-11:5,3,0,0:11,5:NULL:50.6524:326.675,113.385:1.9881,1.9881:5.17558e-08,0.304474,0.695536
+chr1	6417480	.	AGCTGGAGAAGCTGGAGAAGCTGGAGAAGCTGGAGA	.	.	.	END=6417515;RU=agctggaga;PERIOD=9;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999971:4,4:4-4,4-4:18,22,0,4:4,18:2,1|3,3:299.858:326.675,113.385:0.0,0.0:0.0,3.82692e-05,0.999963
+chr1	6419181	.	TTCCTTTCCTTTCCT	.	.	.	END=6419195;RU=ttcct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:57,12,0,0:3,57:NULL:335.583:326.675,113.385:0.0,0.0:0.0,4.64831e-17,1.0
+chr1	6419368	.	TCTCTTTCTCTTTCTCTTTCTCTT	.	.	.	END=6419391;RU=tctctt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,13,0,6:4,30:3,6:283.516:326.675,113.385:0.0,0.0:0.0,2.87679e-09,1.0
+chr1	6419434	.	CTCCTCCTCCTCCTCCTCCTC	.	.	.	END=6419454;RU=ctc;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997097:7,7:3-7,3-7:13,6,0,0:7,13:NULL:113.007:326.675,113.385:1.92721,1.92721:4.64473e-22,0.00220684,0.997799
+chr1	6424394	.	TTGTTGTTGTTG	.	.	.	END=6424405;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999895:4,4:4-4,4-4:16,8,0,2:4,16:3,2:149.289:326.675,113.385:0.0,0.0:0.0,5.31242e-05,0.999948
+chr1	6427092	.	ATATATATATATATATATATATATAT	.	.	.	END=6427117;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.373616:13,13:9-13,9-13:9,1,0,0:12,3|13,6:NULL:55.0636:326.675,113.385:1.49816,1.49816:5.54377e-05,0.610766,0.389242
+chr1	6427177	.	ATTTATTTATTTATTT	.	.	.	END=6427192;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981664:4,4:4-4,4-4:9,9,0,2:4,9:3,2:132.02:326.675,113.385:0.0,0.0:7.25624e-25,0.00914487,0.990874
+chr1	6441337	.	GCCGCCGCCGCCGCC	.	.	.	END=6441351;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:48,22,0,3:5,48:3,2|4,1:418.21:326.675,113.385:0.0,0.0:0.0,3.65892e-14,1.0
+chr1	6441476	.	GCCGGCCGGCCG	.	.	.	END=6441487;RU=gccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,39,0,8:3,39:2,8:565.491:326.675,113.385:0.0,0.0:0.0,1.5715e-11,1.0
+chr1	6442029	.	AACAACAACAACAACAACAACAACAACAACAACAAC	.	.	.	END=6442064;RU=aac;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:12,12:12-12,12-12:19,17,0,6:12,19:4,1|6,1|10,2|11,2:285.658:326.675,113.385:0.0,0.0:0.0,7.73598e-06,0.999994
+chr1	6442239	.	TAAGATTGTAAGATTGTAAGATTG	.	.	.	END=6442262;RU=taagattg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:253.768:326.675,113.385:0.0,0.0:0.0,2.23496e-07,1.0
+chr1	6443834	.	GTTGGTTGGTTG	.	.	.	END=6443845;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,4,0,0:3,29:NULL:154.01:326.675,113.385:0.0,0.0:0.0,7.97915e-09,1.0
+chr1	6444502	.	CTGCTGCTGCTG	.	.	.	END=6444513;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999896:4,4:4-4,4-4:17,17,0,0:4,17:NULL:221.897:326.675,113.385:0.0,0.0:0.0,8.4194e-05,0.999918
+chr1	6445953	.	TATTTTATTTTATTTTATTTTATTT	.	.	.	END=6445977;RU=tattt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959768:5,5:5-5,5-5:8,5,0,2:5,8:3,1|4,1:94.2959:326.675,113.385:0.0,0.0:1.15631e-17,0.0226392,0.977405
+chr1	6450086	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6450121;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.93274:17,18:17-18,18-18:15,6,0,7:17,6|18,9:4,1|5,1|6,1|7,2|10,1|15,1:190.025:326.675,113.385:0.437216,0.0:1.14586e-09,0.932763,0.0673315
+chr1	6453097	.	TTTGTTTGTTTG	.	.	.	END=6453108;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:174.755:326.675,113.385:0.0,0.0:0.0,1.27653e-06,1.0
+chr1	6454520	.	ATCATCATCATCATC	.	.	.	END=6454534;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:31,16,0,3:5,31:4,3:293.005:326.675,113.385:0.0,0.0:0.0,1.47837e-09,1.0
+chr1	6455399	.	AGAAAAGAAAAGAAA	.	.	.	END=6455413;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997507:3,3:3-3,3-3:12,10,0,0:3,12:NULL:142.479:326.675,113.385:0.0,0.0:1.9739e-40,0.00158037,0.998427
+chr1	6456272	.	ACACACACACACACACACACAC	.	.	.	END=6456293;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:11,11:11-11,11-11:21,21,0,11:11,21:4,1|5,1|6,3|7,1|8,2|9,1|10,2:368.916:326.675,113.385:0.0,0.0:4.12443e-30,4.83856e-06,0.999995
+chr1	6456451	.	GTGGTGGTGGTGGTG	.	.	.	END=6456465;RU=gtg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:38,13,0,5:5,38:4,5:310.504:326.675,113.385:0.0,0.0:0.0,9.48682e-12,1.0
+chr1	6459379	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6459398;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999975:4,4:4-4,4-4:18,5,0,0:4,18:NULL:119.271:326.675,113.385:0.0,0.0:0.0,3.32964e-05,0.99997
+chr1	6461977	.	TTTTCTTTTCTTTTC	.	.	.	END=6461991;RU=ttttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:180.804:326.675,113.385:0.0,0.0:0.0,6.43755e-06,0.999995
+chr1	6467447	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	.	END=6467494;RU=agaa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.718776:12,12:9-12,9-12:6,16,0,5:12,6:3,1|4,2|7,1|10,1:220.248:326.675,113.385:0.574428,0.574428:6.58609e-14,0.254121,0.745886
+chr1	6467698	.	CCCTTCCCTTCCCTT	.	.	.	END=6467712;RU=ccctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:237.557:326.675,113.385:0.0,0.0:0.0,1.90104e-07,1.0
+chr1	6467732	.	TGTGTGTGTGTGTG	.	.	.	END=6467745;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:26,13,0,5:7,26:6,4|7,1:264.22:326.675,113.385:0.0990099,0.0990099:0.0,2.91863e-08,1.0
+chr1	6470121	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6470162;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.984002:21,22:20-21,20-22:16,24,0,31:20,5|21,9|22,2:4,1|5,2|6,2|8,4|9,3|10,1|11,1|13,4|14,2|15,3|16,1|19,3|20,3|22,1:557.227:326.675,113.385:0.390807,0.725277:3.74851e-13,0.00585111,0.994165
+chr1	6474556	.	TTGTTGTTGTTG	.	.	.	END=6474567;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,13,0,2:4,19:3,2:211.583:326.675,113.385:0.0,0.0:0.0,8.20497e-06,0.999994
+chr1	6479132	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6479171;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.701656:20,21:19-20,19-21:11,16,0,9:19,3|20,5|21,3:7,2|8,2|9,1|10,1|15,1|18,1|19,1:281.897:326.675,113.385:0.425627,0.791708:2.93234e-06,0.159303,0.84077
+chr1	6481961	.	AATAAATAAATA	.	.	.	END=6481972;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:3,3:3-3,3-3:16,19,0,0:3,16:NULL:233.09:326.675,113.385:0.0,0.0:0.0,0.000120095,0.999881
+chr1	6485320	.	AATTTAATTTAATTT	.	.	.	END=6485334;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988664:3,3:3-3,3-3:10,9,0,0:3,10:NULL:122.733:326.675,113.385:0.0,0.0:2.01741e-29,0.0065498,0.993466
+chr1	6485835	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6485900;RU=tc;PERIOD=2;REF=33.0;EXPTHRESH=33	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0592474:30,30:29-33,29-33:0,16,0,10:NULL:7,1|8,1|10,1|13,1|20,1|25,2|26,1|27,1|30,1:233.514:326.675,113.385:1.16057,1.16057:0.424781,0.462446,0.112889
+chr1	6486465	.	ATAATAATAATAATAATA	.	.	.	END=6486482;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.848806:6,6:5-7,5-7:14,16,0,0:6,12|7,2:NULL:212.196:326.675,113.385:0.573403,0.573403:4.96e-21,0.00105893,0.998945
+chr1	6486709	.	GAGGTAGAGGTAGAGGTA	.	.	.	END=6486726;RU=gaggta;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,38,0,0:3,26:NULL:437.551:326.675,113.385:0.0,0.0:0.0,3.27061e-07,1.0
+chr1	6489307	.	AACCAACCAACCAACCAACCAACCAACCAACC	.	.	.	END=6489338;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999807:8,8:8-8,8-8:16,14,0,5:8,16:2,1|3,1|4,1|7,2:234.493:326.675,113.385:0.0,0.0:9.71125e-37,0.000126954,0.999873
+chr1	6497659	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6497698;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961433:20,20:18-20,18-20:15,22,0,15:19,3|20,12:4,1|5,1|11,2|12,2|14,1|15,3|16,1|17,1|18,2|19,1:397.666:326.675,113.385:0.694341,0.694341:2.62129e-12,0.0371701,0.962893
+chr1	6507213	.	GGCAGGCAGGCA	.	.	.	END=6507224;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,41,0,6:3,19:2,6:480.663:326.675,113.385:0.0,0.0:0.0,5.54561e-06,0.999995
+chr1	6507332	.	CACACACACACACACA	.	.	.	END=6507347;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.217846:8,8:5-8,5-8:2,27,0,0:8,2:NULL:258.606:326.675,113.385:1.2144,1.2144:0.000712133,0.468084,0.531312
+chr1	6507470	.	GTTGTTGTTGTT	.	.	.	END=6507481;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,9,0,3:4,30:3,3:232.787:326.675,113.385:0.0,0.0:0.0,3.9359e-09,1.0
+chr1	6509128	.	AAGAAAGAAAGA	.	.	.	END=6509139;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:223.052:326.675,113.385:0.0,0.0:0.0,5.27716e-08,1.0
+chr1	6509313	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6509338;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.646039:13,14:13-13,13-14:11,15,0,5:13,11:8,2|9,1|10,1|14,1:229.145:326.675,113.385:0.0,0.484441:2.72351e-19,9.01106e-08,1.0
+chr1	6509599	.	AAAAGAAAAGAAAAG	.	.	.	END=6509613;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999312:3,3:3-3,3-3:14,12,0,0:3,14:NULL:169.371:326.675,113.385:0.0,0.0:0.0,0.000471465,0.99953
+chr1	6513189	.	ACAAGTACAAGTACAAGT	.	.	.	END=6513206;RU=acaagt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.592:326.675,113.385:0.0,0.0:0.0,2.41846e-05,0.999978
+chr1	6519516	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=6519555;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.811379:20,20:19-21,19-21:17,10,0,8:19,4|20,11|21,2:6,1|12,1|14,1|15,1|17,2|18,1|19,1:246.071:326.675,113.385:0.635209,0.635209:2.88909e-13,0.0495004,0.95058
+chr1	6519558	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=6519575;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999881:9,9:9-9,9-9:17,6,0,0:9,17:NULL:122.476:326.675,113.385:0.139319,0.139319:8.45691e-32,6.95839e-05,0.999933
+chr1	6520061	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=6520095;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:20,11,0,8:7,20:2,1|3,3|4,1|5,2|6,1:237.78:326.675,113.385:0.139319,0.139319:0.0,4.5035e-06,0.999995
+chr1	6520115	.	AACCAACCAACC	.	.	.	END=6520126;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.892:326.675,113.385:0.0,0.0:0.0,5.40295e-07,1.0
+chr1	6525229	.	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=6525264;RU=aaac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:19,15,0,7:9,19:3,1|4,2|5,1|6,1|8,2:266.151:326.675,113.385:0.0,0.0:0.0,8.39e-06,0.999994
+chr1	6525468	.	TGTGTGTGTGTGTGTG	.	.	.	END=6525483;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994747:8,8:7-8,7-8:29,10,0,4:7,4|8,25:4,1|5,2|7,1:253.989:326.675,113.385:0.419363,0.419363:4.07905e-40,0.00526366,0.994747
+chr1	6530019	.	AATTAATTAATT	.	.	.	END=6530030;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.932457:3,3:3-3,3-3:7,7,0,0:3,7:NULL:92.1075:326.675,113.385:0.0,0.0:3.16866e-23,0.0352042,0.96486
+chr1	6540303	.	CAAAAACAAAAACAAAAA	.	.	.	END=6540320;RU=caaaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.404:326.675,113.385:0.0,0.0:0.0,1.50693e-06,1.0
+chr1	6542023	.	GTTTTGTTTTGTTTT	.	.	.	END=6542037;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999747:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.451:326.675,113.385:0.0,0.0:0.0,0.000141988,0.999858
+chr1	6542152	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	.	END=6542199;RU=ttcc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996639:12,12:11-12,11-12:12,4,0,4:12,12:6,2|7,1|10,1:118.65:326.675,113.385:0.390807,0.390807:3.18866e-31,0.00190421,0.998102
+chr1	6549122	.	TATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATATATA	.	.	END=6549165;RU=ta;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.028408:1,21:1-23,1-23:0,9,0,2:NULL:17,1|21,1:99.7489:326.675,113.385:8.54168,5.05515:0.263481,0.69884,0.0377403
+chr1	6555095	.	GTTGTTGTTGTT	.	.	.	END=6555106;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,11,0,2:4,30:3,2:230.61:326.675,113.385:0.0,0.0:0.0,4.15857e-09,1.0
+chr1	6557207	.	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	.	.	.	END=6557281;RU=ttc;PERIOD=3;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.676758:25,25:25-25,25-25:5,7,0,16:25,5:3,2|4,1|9,1|10,1|12,1|14,3|15,1|16,1|17,2|20,1|22,1|23,1:208.385:326.675,113.385:0.0,0.0:2.55374e-08,0.150502,0.849579
+chr1	6558796	.	GGGTGGGTGGGT	.	.	.	END=6558807;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982124:3,3:3-3,3-3:9,17,0,0:3,9:NULL:193.248:326.675,113.385:0.0,0.0:1.17708e-26,0.0114446,0.988582
+chr1	6573728	.	TGTTTGTTTGTTTGTT	.	.	.	END=6573743;RU=tgtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,8,0,0:4,24:NULL:166.086:326.675,113.385:0.0,0.0:0.0,4.58797e-07,1.0
+chr1	6574488	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=6574515;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999572:7,7:7-7,7-7:14,9,0,7:7,14:2,1|3,2|5,2|6,2:187.963:326.675,113.385:0.0,0.0:1.16039e-33,0.000195257,0.999805
+chr1	6575450	.	TTTATTTATTTATTTA	.	.	.	END=6575465;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:151.885:326.675,113.385:0.0,0.0:0.0,2.16543e-06,1.0
+chr1	6579057	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6579090;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.952174:17,17:16-18,16-18:15,12,0,12:16,3|17,12:5,1|9,1|10,1|11,2|12,2|14,1|15,3|16,1:284.142:326.675,113.385:0.382183,0.382183:4.47207e-14,0.0474327,0.952644
+chr1	6581899	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6581934;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.741081:17,18:16-18,16-18:4,10,0,8:17,2|18,2:5,1|11,2|13,2|14,1|16,1|17,1:178.74:326.675,113.385:0.5634,0.711908:0.0240193,0.808404,0.167687
+chr1	6582216	.	TTTTGTTTTGTTTTG	.	.	.	END=6582230;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999727:3,3:3-3,3-3:15,9,0,0:3,15:NULL:141.616:326.675,113.385:0.0,0.0:0.0,0.000159982,0.999842
+chr1	6589837	.	AATGAATGAATG	.	.	.	END=6589848;RU=aatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:210.49:326.675,113.385:0.0,0.0:0.0,2.6585e-06,1.0
+chr1	6589908	.	AGTCAGTCAGTC	.	.	.	END=6589919;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,21,0,2:3,22:2,2:286.925:326.675,113.385:0.0,0.0:0.0,6.81537e-07,1.0
+chr1	6591632	.	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	.	.	.	END=6591681;RU=ttcct;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.970062:10,10:10-10,10-10:8,10,0,10:10,8:2,1|4,1|5,1|6,3|7,2|8,1|10,1:193.083:326.675,113.385:0.0,0.0:1.12305e-28,0.0144447,0.985586
+chr1	6591950	.	TCCTTTCCTTTCCTTTCCTT	.	.	.	END=6591969;RU=tcctt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:23,1,0,2:4,23:2,1|3,1:113.988:326.675,113.385:0.0,0.0:0.0,4.22388e-07,1.0
+chr1	6598126	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6598147;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99526:11,11:10-11,10-11:17,12,0,3:10,2|11,15:6,1|7,1|8,1:215.682:326.675,113.385:0.195027,0.195027:7.28222e-22,0.00466829,0.995342
+chr1	6601383	.	TGTGTGTGTGTG	.	.	.	END=6601394;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,7,0,5:6,22:5,5:192.526:326.675,113.385:0.0,0.0:0.0,6.67475e-07,1.0
+chr1	6601485	.	AGGGAGGGAGGG	.	.	.	END=6601496;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,16,0,2:3,27:2,2:260.68:326.675,113.385:0.0,0.0:0.0,2.88615e-08,1.0
+chr1	6602519	.	TTATTATTATTATTATTATTATTATTA	.	.	.	END=6602545;RU=tta;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.50064:9,9:8-9,8-9:15,8,0,5:8,3|9,12:3,1|5,1|6,1|7,1|8,1:177.338:326.675,113.385:0.472558,0.472558:4.96969e-19,0.499154,0.500847
+chr1	6626511	.	ACCCACCCACCC	.	.	.	END=6626522;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,29,0,0:3,22:NULL:342.245:326.675,113.385:0.0,0.0:0.0,2.41659e-06,1.0
+chr1	6633217	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6633244;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:14,14:14-14,14-14:26,16,0,9:14,26:5,1|6,1|7,2|8,2|9,1|10,1|13,1:333.577:326.675,113.385:0.0,0.0:5.2809e-28,3.76402e-07,1.0
+chr1	6635223	.	AGGAAGGAAGGAAGGAAGGAAGGA	.	.	.	END=6635246;RU=agga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:22,23,0,5:6,22:3,2|4,1|5,2:338.493:326.675,113.385:0.0,0.0:0.0,1.79946e-06,1.0
+chr1	6637761	.	AAAACAAAACAAAAC	.	.	.	END=6637775;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,9,0,2:3,19:2,1|3,1:177.292:326.675,113.385:0.0,0.0:0.0,4.63746e-06,0.999995
+chr1	6639022	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=6639049;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981574:14,14:13-14,13-14:24,35,0,16:13,5|14,19:5,3|7,1|8,3|9,1|10,4|12,2|13,2:555.047:326.675,113.385:0.345543,0.345543:3.88947e-19,0.0184703,0.98157
+chr1	6650989	.	ACACACACACACACACAC	.	.	.	END=6651006;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999539:9,9:8-9,8-9:20,9,0,8:8,2|9,18:6,1|7,1|8,5|9,1:235.415:326.675,113.385:0.294378,0.294378:9.34017e-37,0.000476681,0.999523
+chr1	6652069	.	AATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=6652100;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:24,9,0,4:8,24:4,1|7,3:214.106:326.675,113.385:0.0,0.0:0.0,1.95385e-07,1.0
+chr1	6653054	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=6653073;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:27,19,0,5:5,27:3,2|4,3:316.099:326.675,113.385:0.169767,0.169767:0.0,2.97714e-08,1.0
+chr1	6660614	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6660633;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999755:5,5:5-5,5-5:15,12,0,2:5,15:3,2:181.981:326.675,113.385:0.0,0.0:0.0,0.000150829,0.99985
+chr1	6661173	.	GTTTTGTTTTGTTTT	.	.	.	END=6661187;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,2:183.986:326.675,113.385:0.0,0.0:0.0,3.33869e-06,1.0
+chr1	6662622	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6662661;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.286442:20,25:20-20,12-26:15,9,0,16:19,2|20,13:5,1|6,1|10,1|11,2|12,1|13,1|14,1|15,3|16,2|19,1|23,1|25,1:288.356:326.675,113.385:0.0,4.65993:6.93767e-25,5.20978e-13,1.0
+chr1	6663558	.	CTGCTGCTGCTG	.	.	.	END=6663569;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:34,27,0,2:4,34:3,2:402.862:326.675,113.385:0.0,0.0:0.0,3.71134e-10,1.0
+chr1	6664650	.	TATGTATGTATG	.	.	.	END=6664661;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:144.866:326.675,113.385:0.0,0.0:0.0,4.62343e-07,1.0
+chr1	6666335	.	TCCCTCCCTCCC	.	.	.	END=6666346;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,22,0,3:3,29:2,3:335.04:326.675,113.385:0.0,0.0:0.0,7.12479e-09,1.0
+chr1	6666349	.	TCTTTCTTTCTT	.	.	.	END=6666360;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:300.283:326.675,113.385:0.0,0.0:0.0,1.5381e-09,1.0
+chr1	6666375	.	TGTGTGTGTGTGTGTG	.	.	.	END=6666390;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:26,19,0,5:8,26:4,1|6,2|7,2:317.137:326.675,113.385:0.0,0.0:2.8061e-41,8.445e-08,1.0
+chr1	6671371	.	AAGAAAGAAAGAAAGA	.	.	.	END=6671386;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998983:4,4:4-4,4-4:14,8,0,0:4,14:NULL:134.801:326.675,113.385:0.0,0.0:2.455e-42,0.000664496,0.999339
+chr1	6673316	.	AAACAAACAAAC	.	.	.	END=6673327;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,21,0,0:3,31:NULL:317.693:326.675,113.385:0.0,0.0:0.0,1.1136e-08,1.0
+chr1	6674435	.	ACACACACACACACACACACACACACAC	.	.	.	END=6674462;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993236:14,14:13-14,13-14:26,23,0,5:13,6|14,20:5,3|6,2:376.116:326.675,113.385:0.323567,0.323567:4.66391e-23,0.00678172,0.993234
+chr1	6680517	.	TGGGTGGGTGGG	.	.	.	END=6680528;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:263.257:326.675,113.385:0.0,0.0:0.0,3.35788e-07,1.0
+chr1	6684271	.	ACAAACAAACAAACAA	.	.	.	END=6684286;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:4,4:4-4,4-4:18,9,0,6:4,18:3,6:196.145:326.675,113.385:0.0,0.0:0.0,1.14496e-05,0.999988
+chr1	6690576	.	TATATATATATA	.	.	.	END=6690587;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999204:6,6:6-6,6-6:14,7,0,0:6,14:NULL:125.106:326.675,113.385:0.0,0.0:7.2177e-23,0.000535469,0.999469
+chr1	6703494	.	TATATATATATATATATATATATATATA	.	.	.	END=6703521;RU=ta;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.479794:14,14:14-14,14-14:4,6,0,0:14,4:NULL:71.5921:326.675,113.385:0.417958,0.417958:0.00029151,0.284597,0.715118
+chr1	6711923	.	CAAACAAACAAACAAA	.	.	.	END=6711938;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:181.384:326.675,113.385:0.0,0.0:0.0,3.89179e-08,1.0
+chr1	6713866	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6713917;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.987703:26,27:21-26,21-28:13,15,0,12:25,2|26,9|27,2:5,1|6,1|13,2|14,1|15,1|21,1|23,3|24,1|27,1:300.289:326.675,113.385:0.973827,1.47541:6.51093e-19,1.9854e-05,0.99998
+chr1	6713993	.	TGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6714004;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.284611:6,18:6-6,6-21:43,16,0,3:6,43:11,1|13,1|18,1:369.866:326.675,113.385:0.0,5.2541:0.0,5.92463e-21,1.0
+chr1	6716659	.	TTTCTTTCTTTC	.	.	.	END=6716670;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,11,0,5:3,31:2,5:260.567:326.675,113.385:0.0,0.0:0.0,1.18079e-09,1.0
+chr1	6720277	.	ACATACATACAT	.	.	.	END=6720288;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.205:326.675,113.385:0.0,0.0:0.0,1.36787e-06,1.0
+chr1	6721062	.	CACACACACACA	.	.	.	END=6721073;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:6,6:6-6,6-6:19,15,0,0:6,19:NULL:208.771:326.675,113.385:0.0,0.0:8.8628e-41,1.658e-05,0.999986
+chr1	6721105	.	TTTTGTTTTGTTTTG	.	.	.	END=6721119;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,6,0,3:3,32:2,3:204.171:326.675,113.385:0.0,0.0:0.0,5.65962e-10,1.0
+chr1	6722604	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=6722663;RU=ttttg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999287:12,12:12-12,12-12:13,15,0,18:12,13:3,1|4,2|5,4|6,1|7,1|8,3|9,2|11,4:320.81:326.675,113.385:0.0,0.0:1.50531e-38,0.000313811,0.999689
+chr1	6723584	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6723621;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.994947:18,19:18-20,19-19:14,11,0,13:18,4|19,10:6,1|8,1|9,2|10,2|14,2|15,2|16,2|18,1:273.883:326.675,113.385:0.540307,0.0:1.55211e-10,0.99495,0.0050625
+chr1	6728597	.	TTTCTTTCTTTC	.	.	.	END=6728608;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,5,0,2:3,27:2,2:166.45:326.675,113.385:0.0,0.0:0.0,2.15002e-08,1.0
+chr1	6730348	.	TGGGTGGGTGGGTGGG	.	.	.	END=6730363;RU=tggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999845:4,4:4-4,4-4:16,29,0,2:4,16:3,2:341.888:326.675,113.385:0.0,0.0:0.0,0.000106812,0.999895
+chr1	6730422	.	TGCTTTGCTTTGCTT	.	.	.	END=6730436;RU=tgctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:54,10,0,5:3,54:2,5:341.071:326.675,113.385:0.0,0.0:0.0,1.7461e-16,1.0
+chr1	6734369	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=6734401;RU=ttg;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:11,11:11-11,11-11:20,16,0,14:11,20:3,1|4,1|5,2|6,2|7,2|8,1|9,2|10,3:341.701:326.675,113.385:0.0,0.0:3.28e-43,3.46465e-06,1.0
+chr1	6735467	.	AATCAATCAATC	.	.	.	END=6735478;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:218.448:326.675,113.385:0.0,0.0:0.0,5.86043e-06,0.999995
+chr1	6736982	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6737025;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.903804:22,22:21-23,21-23:16,12,0,14:21,3|22,11|23,2:6,1|7,1|8,1|9,1|10,3|11,1|15,1|19,1|20,2|22,2:305.424:326.675,113.385:0.559734,0.559734:1.7949e-27,0.00514933,0.994866
+chr1	6740766	.	GTTTGTTTGTTTGTTT	.	.	.	END=6740781;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:228.081:326.675,113.385:0.0,0.0:0.0,4.35477e-07,1.0
+chr1	6745472	.	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6745495;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:3-6,3-6:21,8,0,6:6,21:2,1|3,1|4,2|5,2:198.513:326.675,113.385:0.934582,0.934582:0.0,1.88575e-06,1.0
+chr1	6748758	.	AAACAAACAAACAAAC	.	.	.	END=6748773;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,13,0,6:4,26:2,1|3,5:263.236:326.675,113.385:0.0,0.0:0.0,4.99948e-08,1.0
+chr1	6749336	.	GTTTGTTTGTTT	.	.	.	END=6749347;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999856:3,3:3-3,3-3:16,5,0,0:3,16:NULL:109.32:326.675,113.385:0.0,0.0:0.0,6.8238e-05,0.999933
+chr1	6751150	.	AAAAGAAAAGAAAAG	.	.	.	END=6751164;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.154:326.675,113.385:0.0,0.0:0.0,9.84342e-06,0.999993
+chr1	6752073	.	TATCTATCTATC	.	.	.	END=6752084;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,12,0,2:3,27:2,2:228.917:326.675,113.385:0.0,0.0:0.0,2.1434e-08,1.0
+chr1	6752139	.	TTGTTGTTGTTG	.	.	.	END=6752150;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,14,0,3:4,22:3,3:234.628:326.675,113.385:0.0,0.0:0.0,7.82498e-07,1.0
+chr1	6752213	.	AAACAAACAAAC	.	.	.	END=6752224;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,11,0,2:3,27:2,2:222.519:326.675,113.385:0.0,0.0:0.0,2.70935e-08,1.0
+chr1	6754429	.	TTTGTTTTGTTTTGT	.	.	.	END=6754443;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:3,3:3-3,3-3:18,9,0,3:3,18:2,3:174.936:326.675,113.385:0.0,0.0:0.0,9.15557e-06,0.999993
+chr1	6756494	.	TATATATATATATA	.	.	.	END=6756507;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991242:7,7:7-7,7-7:11,10,0,0:7,11:NULL:132.924:326.675,113.385:0.0,0.0:1.14522e-19,0.00589292,0.994121
+chr1	6762157	.	CTTTCTTTCTTT	.	.	.	END=6762168;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979383:3,3:3-3,3-3:9,5,0,0:3,9:NULL:84.5507:326.675,113.385:0.0,0.0:2.28729e-30,0.010148,0.989873
+chr1	6765667	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6765686;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,14,0,2:5,25:3,2:246.049:326.675,113.385:0.0,0.0:0.0,1.92216e-07,1.0
+chr1	6766469	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6766494;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997988:13,13:13-13,13-13:18,15,0,11:12,2|13,16:4,1|5,1|6,1|9,3|10,2|11,2|12,1:301.827:326.675,113.385:0.139319,0.139319:3.51002e-17,0.00196364,0.998042
+chr1	6766823	.	AAAAGAAAAGAAAAG	.	.	.	END=6766837;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999828:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.407:326.675,113.385:0.0,0.0:0.0,0.000120073,0.99988
+chr1	6772439	.	GGGTGGGTGGGT	.	.	.	END=6772450;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999152:3,3:3-3,3-3:14,16,0,0:3,14:NULL:197.744:326.675,113.385:0.0,0.0:7.51e-43,0.000631579,0.99937
+chr1	6777440	.	AAGAAGAAGAAG	.	.	.	END=6777451;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,11,0,2:4,25:3,2:210.852:326.675,113.385:0.0,0.0:0.0,1.09758e-07,1.0
+chr1	6782984	.	AAGAAGAAGAAG	.	.	.	END=6782995;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:24,19,0,0:4,24:NULL:268.718:326.675,113.385:0.270063,0.270063:0.0,6.42206e-07,1.0
+chr1	6784915	.	ACACACACACACACACACACACACACACACACACAC	.	.	.	END=6784950;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.971275:18,18:16-18,16-18:10,21,0,12:18,10:5,1|7,2|9,1|10,2|11,1|12,1|14,2|15,2:331.534:326.675,113.385:0.480581,0.480581:1.27448e-12,0.0139845,0.986045
+chr1	6785690	.	TAAATAAATAAA	.	.	.	END=6785701;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,23,0,0:3,38:NULL:354.587:326.675,113.385:0.0,0.0:0.0,2.68286e-11,1.0
+chr1	6788409	.	TTTGTTTGTTTG	.	.	.	END=6788420;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:259.589:326.675,113.385:0.0,0.0:0.0,7.9757e-10,1.0
+chr1	6790829	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6790884;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.784671:28,29:28-29,28-29:6,13,0,9:28,4|29,2:5,1|6,1|7,1|13,1|14,1|15,1|16,1|24,1|25,1:230.192:326.675,113.385:0.253975,0.44763:8.85426e-07,0.0276042,0.972453
+chr1	6790889	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6790928;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98747:20,20:20-21,20-21:11,13,0,7:20,11:6,1|9,1|10,2|12,1|13,1|18,1:228.719:326.675,113.385:0.294378,0.294378:1.13944e-13,0.00558371,0.994429
+chr1	6798413	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	.	END=6798460;RU=gata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992273:12,12:12-12,12-12:10,13,0,9:12,10:2,1|4,1|5,1|6,1|8,1|9,1|11,3:229.25:326.675,113.385:0.0,0.0:2.29615e-23,0.00432192,0.995689
+chr1	6801379	.	ACAAGACAAGACAAG	.	.	.	END=6801393;RU=acaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:318.985:326.675,113.385:0.0,0.0:0.0,8.73404e-09,1.0
+chr1	6802048	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6802089;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961253:21,21:18-29,18-29:15,13,0,13:20,3|21,12:5,1|6,1|8,1|10,1|13,3|15,1|16,1|18,1|19,2|20,1:297.166:326.675,113.385:4.22868,4.22868:1.29016e-12,0.0378589,0.962208
+chr1	6804083	.	TGCTGCTGCTGCTGC	.	.	.	END=6804097;RU=tgc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:29,10,0,0:5,29:NULL:204.217:326.675,113.385:0.0,0.0:0.0,1.42854e-08,1.0
+chr1	6806447	.	CATGCATGCATG	.	.	.	END=6806458;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:287.628:326.675,113.385:0.0,0.0:0.0,5.02911e-09,1.0
+chr1	6812486	.	AGCAAGCAAGCA	.	.	.	END=6812497;RU=agca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:3,3:3-3,3-3:17,13,0,0:3,17:NULL:190.203:326.675,113.385:0.0,0.0:0.0,5.80473e-05,0.999942
+chr1	6829363	.	ACCCACCCACCC	.	.	.	END=6829374;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:284.469:326.675,113.385:0.0,0.0:0.0,4.73609e-06,0.999995
+chr1	6830436	.	ACACACACACAC	.	.	.	END=6830447;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998197:6,6:5-6,5-6:23,10,0,4:5,2|6,21:4,2|5,2:221.385:326.675,113.385:0.36513,0.36513:4.3e-44,0.00180941,0.998194
+chr1	6830470	.	GGAGGGAGGGAG	.	.	.	END=6830481;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:186.791:326.675,113.385:0.0,0.0:0.0,1.12599e-06,1.0
+chr1	6831326	.	AAGCAAGCAAGC	.	.	.	END=6831337;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999973:3,3:3-3,3-3:18,7,0,0:3,18:NULL:136.979:326.675,113.385:0.0,0.0:0.0,2.05381e-05,0.99998
+chr1	6832131	.	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=6832174;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.818535:22,22:22-23,22-23:15,12,0,14:21,2|22,11|23,2:4,1|5,1|6,1|9,1|10,1|11,1|12,1|13,1|15,3|16,1|18,1|20,1:293.524:326.675,113.385:0.469228,0.469228:1.8178e-13,0.00523002,0.994783
+chr1	6834875	.	CTTCTTCTTCTTCTT	.	.	.	END=6834889;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,17,0,0:5,24:NULL:253.329:326.675,113.385:0.0,0.0:0.0,8.6663e-07,1.0
+chr1	6842625	.	ATGGATGGATGG	.	.	.	END=6842636;RU=atgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,16,0,3:3,27:2,3:272.712:326.675,113.385:0.0,0.0:0.0,2.1608e-08,1.0
+chr1	6845815	.	TGTTGTTGTTGT	.	.	.	END=6845826;RU=tgt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999669:4,4:4-4,4-4:15,7,0,0:4,15:NULL:125.168:326.675,113.385:0.0,0.0:0.0,0.00017801,0.999826
+chr1	6852419	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6852478;RU=agga;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.879306:15,16:15-15,15-16:12,20,0,12:15,9|16,3:3,1|5,1|6,1|7,1|9,2|11,2|12,2|13,1|15,1:332.587:326.675,113.385:0.0,0.484441:2.61894e-23,0.000296602,0.999705
+chr1	6852486	.	AGGCAGGCAGGC	.	.	.	END=6852497;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,12,0,0:3,31:NULL:228.067:326.675,113.385:0.0,0.0:0.0,2.71519e-09,1.0
+chr1	6855646	.	CAGCAGCAGCAGCAG	.	.	.	END=6855660;RU=cag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,11,0,0:5,24:NULL:195.661:326.675,113.385:0.0,0.0:0.0,4.6101e-07,1.0
+chr1	6856365	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6856396;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999082:16,16:16-16,16-16:20,5,0,4:15,3|16,17:5,1|10,1|11,1|15,1:165.745:326.675,113.385:0.0,0.0:2.09772e-20,0.000841373,0.999164
+chr1	6858278	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6858317;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.330157:20,36:20-20,19-36:20,12,0,16:19,5|20,13|21,2:4,1|5,1|8,1|9,2|11,1|12,2|14,1|15,1|16,3|17,1|18,1|36,1:357.236:326.675,113.385:0.0990099,8.00505:3.23109e-15,0.00236699,0.99764
+chr1	6862315	.	AAAATAAAATAAAAT	.	.	.	END=6862329;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:238.178:326.675,113.385:0.0,0.0:0.0,2.03729e-07,1.0
+chr1	6864440	.	TTTGTTTGTTTG	.	.	.	END=6864451;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:161.012:326.675,113.385:0.0,0.0:0.0,2.86971e-07,1.0
+chr1	6865995	.	AAAGAAAAGAAAAGA	.	.	.	END=6866009;RU=aaaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997123:3,3:3-3,3-3:11,14,0,3:3,11:2,3:191.584:326.675,113.385:0.0,0.0:2.80918e-35,0.00147673,0.998527
+chr1	6868261	.	GTTTGTTTGTTT	.	.	.	END=6868272;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:254.657:326.675,113.385:0.0,0.0:0.0,6.79809e-08,1.0
+chr1	6869420	.	ATGTAGATGTAGATGTAGATGTAG	.	.	.	END=6869443;RU=atgtag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,8,0,2:4,28:3,2:201.403:326.675,113.385:0.0,0.0:0.0,1.7602e-08,1.0
+chr1	6870752	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6870787;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.986942:18,19:17-18,17-19:14,13,0,11:17,3|18,9|19,2:4,1|6,1|7,1|10,1|12,1|13,1|15,2|16,1|17,1|19,1:282.411:326.675,113.385:0.169767,0.61895:5.50292e-17,0.000124617,0.999879
+chr1	6872012	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=6872031;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999866:4,4:4-4,4-4:16,8,0,3:4,16:2,1|3,2:156.875:326.675,113.385:0.0,0.0:0.0,6.58613e-05,0.999934
+chr1	6872093	.	GTGTGTGTGTGT	.	.	.	END=6872104;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99991:6,6:6-6,6-6:17,5,0,0:6,17:NULL:110.788:326.675,113.385:0.0,0.0:2.43651e-29,5.65674e-05,0.999947
+chr1	6872191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6872254;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.0451539:29,34:16-32,16-34:0,13,0,10:NULL:5,1|8,1|13,1|16,1|20,1|26,1|27,1|29,2|34,1:195.557:326.675,113.385:7.01576,8.73288:5.43447e-08,0.643162,0.35688
+chr1	6876058	.	ACACACACACACACACACACACACACAC	.	.	.	END=6876085;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999752:14,14:14-17,14-17:17,5,0,9:14,17:5,2|8,2|9,1|11,1|12,1|13,1|14,1:190.632:326.675,113.385:0.924033,0.924033:3.31908e-30,2.98706e-05,0.999971
+chr1	6876396	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	.	END=6876439;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995289:11,11:10-11,10-11:11,15,0,8:11,11:3,1|4,1|5,2|6,1|7,1|8,1|9,1:246.682:326.675,113.385:0.323567,0.323567:2.91614e-28,0.00364165,0.996368
+chr1	6876754	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=6876787;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.953393:17,17:17-18,17-18:15,15,0,15:17,13|18,2:4,2|7,2|9,1|11,1|12,4|13,1|14,2|15,1|16,1:330.521:326.675,113.385:0.298675,0.298675:9.93793e-16,0.00036573,0.999636
+chr1	6877580	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6877621;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.299487:21,25:21-21,21-27:7,5,0,10:21,7:6,1|7,1|8,2|9,1|10,1|12,1|14,1|16,1|25,1:164.464:326.675,113.385:0.0,2.20972:3.99637e-15,1.38343e-07,1.0
+chr1	6877626	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6877675;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.124742:24,24:17-25,17-25:2,6,0,9:24,2:6,1|9,1|11,2|15,1|16,2|17,2:136.348:326.675,113.385:3.45807,3.45807:0.699534,0.284439,0.016058
+chr1	6881104	.	ATATATATATAT	.	.	.	END=6881115;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,9,0,0:6,21:NULL:171.527:326.675,113.385:0.0,0.0:4.71048e-28,4.14109e-06,0.999995
+chr1	6881253	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6881268;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.296309:8,13:8-8,8-14:19,12,0,4:8,19:4,1|5,1|7,1|13,1:230.348:326.675,113.385:0.0,2.59293:3.54084e-40,9.23434e-08,1.0
+chr1	6882309	.	TTGTTGTTGTTG	.	.	.	END=6882320;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:4,4:4-4,4-4:19,9,0,0:4,19:NULL:159.511:326.675,113.385:0.0,0.0:0.0,1.9165e-05,0.99998
+chr1	6884104	.	CAACAACAACAACAA	.	.	.	END=6884118;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,10,0,2:5,21:4,2:192.446:326.675,113.385:0.0,0.0:0.0,3.0523e-06,1.0
+chr1	6886094	.	AAAACAAAACAAAAC	.	.	.	END=6886108;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:152.486:326.675,113.385:0.0,0.0:0.0,6.3523e-06,0.999994
+chr1	6888655	.	GCCAGCCAGCCA	.	.	.	END=6888666;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,7,0,2:3,23:2,2:168.016:326.675,113.385:0.0,0.0:0.0,4.24213e-07,1.0
+chr1	6891722	.	AGGGAGGGAGGGAGGG	.	.	.	END=6891737;RU=aggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999888:4,4:3-4,3-4:16,18,0,0:4,16:NULL:228.159:326.675,113.385:0.21692,0.21692:1.29816e-39,0.000103964,0.999896
+chr1	6891738	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=6891777;RU=ga;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.525647:20,20:18-20,18-20:9,18,0,8:19,3|20,6:5,1|6,1|8,1|14,3|18,1|20,1:277.976:326.675,113.385:0.66122,0.66122:2.49917e-14,0.468764,0.531344
+chr1	6897317	.	TATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=6897366;RU=ta;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.110435:24,24:19-26,19-26:2,4,0,0:24,2:NULL:48.8495:326.675,113.385:2.84784,2.84784:0.636096,0.33096,0.0330274
+chr1	6901344	.	TATTATTATTAT	.	.	.	END=6901355;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999632:4,4:4-4,4-4:15,6,0,0:4,15:NULL:114.575:326.675,113.385:0.0,0.0:3.2e-44,0.000213797,0.999788
+chr1	6901756	.	TTGGTTGGTTGG	.	.	.	END=6901767;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999895:3,3:3-3,3-3:16,6,0,4:3,16:2,4:150.512:326.675,113.385:0.0,0.0:0.0,3.60843e-05,0.999964
+chr1	6905302	.	ACCACCACCACC	.	.	.	END=6905313;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995309:4,4:4-4,4-4:11,8,0,0:4,11:NULL:114.625:326.675,113.385:0.0,0.0:1.1877e-37,0.00296103,0.997048
+chr1	6908211	.	CCCTCCCTCCCT	.	.	.	END=6908222;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.755:326.675,113.385:0.0,0.0:0.0,2.04981e-06,1.0
+chr1	6910139	.	AAACAAACAAACAAACAAAC	.	.	.	END=6910158;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998254:5,5:5-5,5-5:13,14,0,2:5,13:2,1|4,1:194.432:326.675,113.385:0.0,0.0:2e-44,0.00126943,0.998733
+chr1	6911240	.	CCCACCCCACCCCAC	.	.	.	END=6911254;RU=cccac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.945509:3,3:3-3,3-3:8,16,0,0:3,8:NULL:177.178:326.675,113.385:0.19802,0.19802:1.03576e-24,0.0401747,0.959892
+chr1	6925140	.	TTTGTTTGTTTGTTTG	.	.	.	END=6925155;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,13,0,2:4,20:2,1|3,1:211.672:326.675,113.385:0.0,0.0:0.0,6.06461e-06,0.999994
+chr1	6930503	.	TGTTTTTTTGTTTTTTTGTTTTTT	.	.	.	END=6930526;RU=tgtttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:171.573:326.675,113.385:0.0,0.0:0.0,2.04177e-06,1.0
+chr1	6933915	.	GAGGGGAGGAGGGGAGGAGGGGAGGAGGGGAG	.	.	.	END=6933946;RU=gaggggag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.353389:4,4:1-4,1-4:3,5,0,0:4,3:NULL:60.2262:326.675,113.385:0.782116,0.782116:2.05313e-08,0.459316,0.540791
+chr1	6935598	.	TACATACATACA	.	.	.	END=6935609;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999555:3,3:3-3,3-3:14,8,0,4:3,14:2,4:155.577:326.675,113.385:0.0,0.0:0.0,0.000136997,0.999865
+chr1	6935929	.	TAATTAATTAAT	.	.	.	END=6935940;RU=taat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997324:3,3:3-3,3-3:12,8,0,0:3,12:NULL:115.153:326.675,113.385:0.0,0.0:6.01711e-39,0.00141431,0.998588
+chr1	6938052	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6938097;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.361021:23,29:23-23,20-31:15,17,0,23:22,2|23,13:5,1|6,1|7,1|8,1|11,2|12,2|13,3|14,1|16,2|17,1|18,2|19,1|20,1|21,2|22,1|29,1:436.004:326.675,113.385:0.0,3.32414:1.20159e-17,2.01133e-05,0.99998
+chr1	6938544	.	ATACATACATACATAC	.	.	.	END=6938559;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:39,21,0,5:4,39:2,1|3,4:381.92:326.675,113.385:0.0,0.0:0.0,7.22622e-12,1.0
+chr1	6938593	.	CACACACACACACACACA	CACACACACACACACACACA	.	.	END=6938610;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.961031:9,10:9-9,9-10:30,23,0,10:9,28|10,2:4,2|5,1|8,6|10,1:428.184:326.675,113.385:0.0,0.498798:7.6e-44,2.5635e-10,1.0
+chr1	6938918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6938965;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.403396:24,29:24-24,24-29:18,24,0,20:23,5|24,13:5,3|6,1|7,1|8,1|9,1|10,1|11,1|13,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|28,1|29,1:487.422:326.675,113.385:0.0,1.35271:1.02382e-27,1.19979e-11,1.0
+chr1	6945641	.	TGTGAGTGTGAGTGTGAG	.	.	.	END=6945658;RU=tgtgag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,21,0,4:3,29:2,3|3,1:332.918:326.675,113.385:0.0,0.0:0.0,8.39224e-09,1.0
+chr1	6945661	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=6945680;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:39,17,0,6:9,3|10,36:5,1|6,1|7,1|8,1|9,2:371.987:326.675,113.385:0.0990099,0.0990099:0.0,2.72637e-08,1.0
+chr1	6954438	.	TATATATATATATATATA	.	.	.	END=6954455;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999478:9,9:9-9,9-9:15,7,0,0:9,15:NULL:128.249:326.675,113.385:0.0,0.0:2.06945e-18,0.000350763,0.999652
+chr1	6956316	.	ATTTATTTATTTATTTATTTATTTATTTATTT	.	.	.	END=6956347;RU=attt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999661:8,8:8-8,8-8:15,5,0,6:8,15:3,2|5,2|6,2:152.494:326.675,113.385:0.0,0.0:6.12333e-34,0.000170439,0.999833
+chr1	6957040	.	ATCATCATCATC	.	.	.	END=6957051;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:182.817:326.675,113.385:0.0,0.0:0.0,3.3155e-08,1.0
+chr1	6958768	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGT	.	.	END=6958779;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.293816:6,9:6-6,6-10:10,17,0,2:6,10:6,1|8,1:213.017:326.675,113.385:0.0,1.39551:5.11656e-28,6.98227e-08,1.0
+chr1	6958877	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6958916;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.318887:20,35:20-20,20-35:15,11,0,15:20,15:5,1|7,3|9,2|12,1|13,2|17,1|18,2|19,1|35,2:299.43:326.675,113.385:0.0,6.05764:5.30546e-27,3.70236e-14,1.0
+chr1	6961641	.	AAGAAAAAAGAAAAAAGAAAAAAGAAAA	.	.	.	END=6961668;RU=aagaaaa;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999069:4,4:4-4,4-4:15,15,0,0:4,15:NULL:201.791:326.675,113.385:0.0,0.0:9.2e-44,0.00088725,0.999118
+chr1	6967994	.	TAATAATAATAA	.	.	.	END=6968005;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999557:4,4:4-4,4-4:15,10,0,0:4,15:NULL:149.73:326.675,113.385:0.0,0.0:7.03689e-40,0.000286317,0.999713
+chr1	6969238	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6969285;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.66372:24,24:23-24,23-24:5,21,0,20:24,5:4,1|6,2|9,1|11,1|12,2|13,1|14,5|15,3|17,1|20,1|21,1|23,1:371.431:326.675,113.385:0.439006,0.439006:1.94957e-06,0.16676,0.83331
+chr1	6970340	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=6970399;RU=ag;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.484082:30,30:29-30,29-30:4,12,0,11:30,4:6,1|7,1|9,1|10,1|12,3|18,1|22,1|23,1|30,1:220.422:326.675,113.385:0.414188,0.414188:1.43804e-12,0.213388,0.786655
+chr1	6970529	.	AGACAGACAGAC	.	.	.	END=6970540;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:168.514:326.675,113.385:0.0,0.0:0.0,4.77189e-06,0.999995
+chr1	6974307	.	ACACACACACAC	.	.	.	END=6974318;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.92277:6,6:6-7,6-7:7,9,0,2:6,7:5,2:129.578:326.675,113.385:0.486863,0.486863:8.90486e-15,0.0332825,0.966779
+chr1	6978082	.	ATTTATTTATTTATTT	.	.	.	END=6978097;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999606:4,4:4-4,4-4:15,10,0,0:4,15:NULL:154.043:326.675,113.385:0.0,0.0:3e-45,0.000300969,0.999704
+chr1	6979840	.	TTCATTCATTCA	.	.	.	END=6979851;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:165.684:326.675,113.385:0.0,0.0:0.0,3.1439e-06,1.0
+chr1	6981484	.	TGTCTGTCTGTCTGTC	.	.	.	END=6981499;RU=tgtc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,19,0,9:4,32:2,1|3,8:361.317:326.675,113.385:0.0,0.0:0.0,7.5252e-10,1.0
+chr1	6982427	.	TTGTTTGTTTGTTTGT	.	.	.	END=6982442;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,3:271.065:326.675,113.385:0.0,0.0:0.0,1.84623e-09,1.0
+chr1	6982601	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6982652;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.312785:26,39:24-27,24-39:3,6,0,17:26,3:7,1|8,2|10,1|12,1|15,2|16,1|17,2|18,1|24,3|25,2|39,1:210.08:326.675,113.385:0.517131,6.22137:8.48768e-11,0.000485426,0.999515
+chr1	6983427	.	GAGAGAGAGAGAGAGA	.	.	.	END=6983442;RU=ga;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929127:8,8:7-8,7-8:15,8,0,0:7,2|8,13:NULL:140.313:326.675,113.385:0.431574,0.431574:5.41404e-20,0.0708413,0.929253
+chr1	6985748	.	AATCAATCAATCAATCAATCAATCAATC	.	.	.	END=6985775;RU=aatc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:33,14,0,9:7,33:3,2|4,2|5,2|6,3:328.098:326.675,113.385:0.0,0.0:0.0,3.53258e-10,1.0
+chr1	6985795	.	AACAACAACAACAACAAC	.	.	.	END=6985812;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:34,14,0,2:6,34:4,2:280.867:326.675,113.385:0.0,0.0:0.0,3.42017e-10,1.0
+chr1	6986592	.	AAACAAACAAACAAAC	.	.	.	END=6986607;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998937:4,4:4-4,4-4:13,17,0,3:4,13:2,1|3,2:226.162:326.675,113.385:0.0,0.0:7.04477e-36,0.000588515,0.999415
+chr1	6987484	.	AAGAAAGAAAGA	.	.	.	END=6987495;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:128.281:326.675,113.385:0.0,0.0:0.0,2.64797e-06,1.0
+chr1	6988550	.	TAAATAAATAAA	.	.	.	END=6988561;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,3,0,0:3,21:NULL:111.913:326.675,113.385:0.0,0.0:0.0,2.54549e-06,1.0
+chr1	6988683	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	.	END=6988726;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.467214:11,11:9-11,9-11:13,12,0,7:9,2|11,11:3,1|6,2|7,1|8,1|10,2:229.771:326.675,113.385:0.999559,0.999559:5.65804e-20,0.53254,0.467569
+chr1	6988729	.	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	.	.	END=6988989;RU=cctttcttc;PERIOD=9;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.229205:13,44:10-19,40-49:0,5,45,24:NULL:4,4|5,1|6,3|7,3|8,2|9,3|10,5|11,1|12,1|13,1:532.764:326.675,113.385:1.94191,2.30908:2.71327e-26,1.0,2.09857e-20
+chr1	6988990	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	.	END=6989021;RU=cttt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:8,8:4-8,4-8:23,14,0,14:8,23:3,2|4,5|5,2|6,1|7,4:324.178:326.675,113.385:0.780108,0.780108:0.0,4.11433e-07,1.0
+chr1	6994475	.	CTGCTGCTGCTG	.	.	.	END=6994486;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,19,0,0:4,24:NULL:271.361:326.675,113.385:0.0,0.0:0.0,1.08504e-06,1.0
+chr1	6996371	.	AATAATAATAATAATAAT	.	.	.	END=6996388;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:2-6,2-6:26,11,0,4:6,26:5,4:232.728:326.675,113.385:1.24611,1.24611:0.0,5.89955e-08,1.0
+chr1	6996545	.	AAGAAGAAGAAGAAG	.	.	.	END=6996559;RU=aag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,6,0,2:5,26:4,1|5,1:173.389:326.675,113.385:0.0,0.0:0.0,3.43247e-08,1.0
+chr1	6998981	.	AAAATAAAATAAAAT	.	.	.	END=6998995;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999132:3,3:3-3,3-3:13,9,0,2:3,13:2,2:142.538:326.675,113.385:0.0,0.0:6e-45,0.000369236,0.999636
+chr1	7000338	.	AATAAATAAATAAATAAATAAATA	.	.	.	END=7000361;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999853:6,6:6-6,6-6:16,8,0,4:6,16:3,1|4,1|5,2:169.898:326.675,113.385:0.0,0.0:4.152e-42,6.63619e-05,0.999934
+chr1	7002437	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7002468;RU=ga;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.731673:16,16:12-16,12-16:17,17,0,0:15,4|16,13:NULL:248.743:326.675,113.385:1.0297,1.0297:1.31245e-14,0.268042,0.731961
+chr1	7002484	.	GAAAGGAAAGGAAAG	.	.	.	END=7002498;RU=gaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:213.569:326.675,113.385:0.0,0.0:0.0,1.18702e-05,0.999987
+chr1	7003509	.	TATATATATATA	.	.	.	END=7003520;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996778:6,6:6-6,6-6:12,13,0,0:6,12:NULL:167.642:326.675,113.385:0.0,0.0:1.43452e-21,0.00203514,0.997973
+chr1	7004299	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7004318;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:4,4:3-4,3-4:17,9,0,3:4,17:3,3:174.62:326.675,113.385:0.35561,0.35561:0.0,1.85123e-05,0.999985
+chr1	7004803	.	CACACACACACACACACACACACACACACA	.	.	.	END=7004832;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.706049:15,15:14-15,14-15:16,20,0,22:14,4|15,12:5,4|6,4|7,2|8,2|9,1|10,4|11,1|12,1|14,3:434.637:326.675,113.385:0.442564,0.442564:8.53683e-14,0.293692,0.706312
+chr1	7005829	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=7005885;RU=tgt;PERIOD=3;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997035:19,19:18-19,18-19:12,12,0,16:19,12:5,2|6,1|7,2|12,2|13,1|14,1|15,2|16,3|18,2:284.233:326.675,113.385:0.169767,0.169767:2.05796e-21,0.00117709,0.998829
+chr1	7006807	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7006830;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.975827:6,6:6-6,6-6:8,10,0,5:6,8:2,1|4,2|5,2:156.199:326.675,113.385:0.0,0.0:1.54873e-27,0.0118326,0.988195
+chr1	7006964	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=7007007;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.758626:11,11:11-11,11-11:5,5,0,7:11,5:2,1|4,1|6,1|7,1|8,1|9,2:116.354:326.675,113.385:0.0990099,0.0990099:1.36893e-12,0.116742,0.88336
+chr1	7008700	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=7008763;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.508596:16,16:13-16,13-16:4,10,0,8:16,4:5,1|6,3|7,2|8,1|10,1:169.954:326.675,113.385:0.772658,0.772658:4.78346e-09,0.374145,0.625905
+chr1	7009944	.	AACAACAACAAC	.	.	.	END=7009955;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994513:4,4:4-4,4-4:11,5,0,0:4,11:NULL:89.5565:326.675,113.385:0.0,0.0:6.90523e-37,0.0032162,0.996792
+chr1	7016143	.	ATGTTATGTTATGTT	.	.	.	END=7016157;RU=atgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,19,0,0:3,31:NULL:302.422:326.675,113.385:0.0,0.0:0.0,2.5526e-09,1.0
+chr1	7018592	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7018643;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.975679:25,28:25-34,28-32:10,12,0,25:25,5|28,5:4,1|5,1|6,1|7,1|11,1|17,2|18,1|20,4|21,2|22,2|23,3|24,2|25,2|27,1|32,1:382.265:326.675,113.385:3.4316,1.90016:1.06017e-15,0.977485,0.022559
+chr1	7022856	.	ACACACACACACACACACACACAC	.	.	.	END=7022879;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.830934:12,12:10-12,10-12:6,9,0,8:12,6:4,1|5,1|6,2|7,1|9,1|10,1|11,1:174.926:326.675,113.385:0.831212,0.831212:1.38565e-12,0.094323,0.905777
+chr1	7022880	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7022935;RU=ag;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.217122:28,32:26-30,26-32:3,11,0,9:28,3:6,1|8,1|18,1|21,1|23,1|26,2|27,1|29,1:192.037:326.675,113.385:0.717258,1.5095:5.02768e-11,0.00427917,0.995733
+chr1	7023312	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=7023410;RU=ctt;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0272976:34,34:11-34,11-34:0,15,0,15:NULL:6,1|7,2|13,2|15,1|18,1|20,1|21,1|22,1|23,1|28,1|32,1|33,1|34,1:257.589:326.675,113.385:10.0786,10.0786:9.48561e-16,0.620223,0.379835
+chr1	7025016	.	AACCAACCAACC	.	.	.	END=7025027;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,12,0,3:3,20:2,3:205.946:326.675,113.385:0.0,0.0:0.0,3.0456e-06,1.0
+chr1	7026416	.	TTTATTTTATTTTAT	.	.	.	END=7026430;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:168.583:326.675,113.385:0.0,0.0:0.0,3.49234e-07,1.0
+chr1	7028391	.	AATAAATAAATA	.	.	.	END=7028402;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:243.642:326.675,113.385:0.0,0.0:0.0,1.91427e-08,1.0
+chr1	7028876	.	TTTATTTATTTA	.	.	.	END=7028887;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999871:3,3:3-3,3-3:17,12,0,0:3,17:NULL:186.491:326.675,113.385:0.0,0.0:0.0,9.72933e-05,0.999903
+chr1	7029276	.	ACACACACACACACACACACACAC	.	.	.	END=7029299;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999972:12,12:12-14,12-14:18,20,0,15:12,18:5,3|6,2|7,2|9,4|10,2|11,2:383.754:326.675,113.385:0.617999,0.617999:4.03621e-28,1.31504e-05,0.999987
+chr1	7029315	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7029344;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,17,0,4:6,24:2,1|3,1|5,2:282.108:326.675,113.385:0.0,0.0:0.0,3.38642e-07,1.0
+chr1	7032756	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=7032799;RU=aata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989657:11,11:11-15,11-15:10,12,0,7:11,10:6,3|7,2|10,2:198.339:326.675,113.385:1.77026,1.77026:2.88596e-22,0.00340046,0.99661
+chr1	7032984	.	ACAAAAAAACAAAAAAACAAAAAA	.	.	.	END=7033007;RU=acaaaaaa;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99989:3,3:3-3,3-3:16,6,0,3:3,16:2,3:138.409:326.675,113.385:0.0,0.0:0.0,4.93539e-05,0.999955
+chr1	7033046	.	AGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	END=7033061;RU=agac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.338812:4,14:4-4,4-14:22,8,0,3:4,22:7,1|10,1|14,1:200.432:326.675,113.385:0.0,3.25928:0.0,5.07546e-22,1.0
+chr1	7033993	.	TATATATATATA	.	.	.	END=7034004;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998488:6,6:6-6,6-6:13,16,0,0:6,13:NULL:199.889:326.675,113.385:0.0,0.0:8.53176e-25,0.000960543,0.999043
+chr1	7035493	.	CACACACACACACACACACACACACACACACACACACA	.	.	.	END=7035530;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.607126:19,19:18-19,18-19:14,10,0,10:18,4|19,10:7,1|8,1|10,1|11,2|12,1|13,2|17,1|19,1:245.262:326.675,113.385:0.481803,0.481803:1.87697e-18,0.391868,0.608193
+chr1	7035536	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7035569;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.572888:17,17:17-18,17-18:20,10,0,3:16,3|17,14|18,3:5,1|8,1|13,1:222.459:326.675,113.385:0.475866,0.475866:2.53131e-18,0.000967349,0.999036
+chr1	7038709	.	AAATAAATAAAT	.	.	.	END=7038720;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.928445:3,3:3-3,3-3:7,1,0,0:3,7:NULL:37.2692:326.675,113.385:0.0,0.0:7.60169e-21,0.0294883,0.970568
+chr1	7038726	.	TAAATAAATAAATAAATAAATAAATAAATAAATAAA	.	.	.	END=7038761;RU=taaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.726846:9,9:9-9,9-9:5,2,0,2:9,5:3,1|5,1:53.6287:326.675,113.385:0.0,0.0:5.87215e-13,0.144436,0.855649
+chr1	7039465	.	TATATATATATATATATATATATATATATATA	.	.	.	END=7039496;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.265955:16,16:4-16,4-16:5,5,0,0:16,5:NULL:74.2867:326.675,113.385:3.94882,3.94882:4.58141e-07,0.622396,0.377661
+chr1	7046294	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	.	.	.	END=7046333;RU=aaat;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:10,10:9-10,9-10:19,23,0,11:10,19:3,1|4,2|6,2|7,1|8,3|9,2:380.597:326.675,113.385:0.236383,0.236383:0.0,1.23677e-05,0.999987
+chr1	7046658	.	AATAAATAAATAAATA	.	.	.	END=7046673;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.971748:4,4:4-4,4-4:9,17,0,0:4,9:NULL:183.662:326.675,113.385:0.0,0.0:7.18699e-20,0.0220878,0.977957
+chr1	7047632	.	ATTATTATTATT	.	.	.	END=7047643;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999909:4,4:4-4,4-4:17,6,0,0:4,17:NULL:120.143:326.675,113.385:0.0,0.0:0.0,5.72559e-05,0.999942
+chr1	7047891	.	TAATATAATATAATATAATATAATA	.	.	.	END=7047915;RU=taata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997731:5,5:5-5,5-5:12,10,0,4:5,12:2,1|3,1|4,2:170.786:326.675,113.385:0.0,0.0:5.98175e-27,0.00149521,0.998511
+chr1	7050067	.	AAATAAATAAATAAAT	.	.	.	END=7050082;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999941:4,4:2-4,2-4:17,8,0,2:4,17:3,2:157.568:326.675,113.385:0.694341,0.694341:0.0,2.86342e-05,0.999972
+chr1	7052312	.	TTTCTTTCTTTC	.	.	.	END=7052323;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.089:326.675,113.385:0.0,0.0:0.0,9.44406e-08,1.0
+chr1	7068379	.	CCCCCCACCCCCCACCCCCCA	CCCCCCA	.	.	END=7068399;RU=cccccca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0466103:1,1:1-3,1-3:0,3,0,0:NULL:NULL:26.5653:326.675,113.385:0.913899,0.913899:0.162367,0.48561,0.352167
+chr1	7069168	.	TGTGTGTGTGTGTG	.	.	.	END=7069181;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999851:7,7:6-7,6-7:16,14,0,2:7,16:6,2:203.023:326.675,113.385:0.345543,0.345543:3.63253e-33,8.08638e-05,0.999919
+chr1	7069209	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7069246;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993181:19,19:19-19,19-19:15,12,0,12:18,2|19,13:7,1|10,1|11,2|12,1|13,2|15,2|16,1|17,2:271.882:326.675,113.385:0.139319,0.139319:9.11502e-17,0.00584253,0.994173
+chr1	7071018	.	TTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=7071053;RU=tta;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979369:12,12:12-12,12-12:9,12,0,5:12,9:5,1|9,1|10,1|11,2:189.892:326.675,113.385:0.0,0.0:7.30704e-17,0.0105619,0.989462
+chr1	7072179	.	TTTGTTTGTTTG	.	.	.	END=7072190;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:37,15,0,0:3,37:NULL:289.246:326.675,113.385:0.0,0.0:0.0,4.57678e-11,1.0
+chr1	7086512	.	TCCTTCCTTCCT	.	.	.	END=7086523;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,15,0,0:3,19:NULL:209.826:326.675,113.385:0.0,0.0:0.0,9.0128e-06,0.999994
+chr1	7087714	.	TATATATATATATATATA	TATATATATATATATA	.	.	END=7087731;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.933757:8,9:8-9,9-9:11,3,0,0:8,3|9,8:NULL:78.6639:326.675,113.385:0.478946,0.0:1.99405e-08,0.934517,0.0655771
+chr1	7088366	.	AAACAAACAAACAAAC	.	.	.	END=7088381;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,8,0,2:4,23:2,1|3,1:183.097:326.675,113.385:0.139319,0.139319:0.0,4.63816e-07,1.0
+chr1	7089402	.	AGGAGGAGGAGG	.	.	.	END=7089413;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999212:4,4:4-4,4-4:14,9,0,0:4,14:NULL:136.969:326.675,113.385:0.0,0.0:0.0,0.00055484,0.999447
+chr1	7091385	.	ATCATCATCATCATC	.	.	.	END=7091399;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:5,5:5-5,5-5:18,7,0,0:5,18:NULL:140.115:326.675,113.385:0.0,0.0:0.0,1.96216e-05,0.99998
+chr1	7091399	.	CACCACCACCACCAC	.	.	.	END=7091413;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:5,5:5-5,5-5:18,6,0,0:5,18:NULL:130.27:326.675,113.385:0.0,0.0:0.0,2.13014e-05,0.999979
+chr1	7097340	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7097369;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979289:15,15:14-15,14-15:12,12,0,9:14,2|15,10:7,1|9,2|10,1|12,1|13,1|14,2|15,1:238.408:326.675,113.385:0.352842,0.352842:2.76799e-20,0.016334,0.983702
+chr1	7097804	.	ATAATAATAATA	.	.	.	END=7097815;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999954:4,4:4-4,4-4:17,8,0,4:4,17:3,3|4,1:169.671:326.675,113.385:0.0,0.0:0.0,1.21917e-05,0.999987
+chr1	7099389	.	ATTTATTTATTTATTTATTTATTT	.	.	.	END=7099412;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99991:6,6:6-6,6-6:17,6,0,3:6,17:3,2|4,1:150.344:326.675,113.385:0.0,0.0:1.42e-42,5.46034e-05,0.999948
+chr1	7099628	.	TGTGTGTGTGTG	.	.	.	END=7099639;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-7,6-7:49,14,0,9:5,2|6,47:4,3|5,5|7,1:422.624:326.675,113.385:0.431574,0.431574:0.0,5.61873e-11,1.0
+chr1	7099942	.	ATGTATGTATGTATGTATGT	.	.	.	END=7099961;RU=atgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:35,26,0,7:5,35:2,1|3,2|4,4:429.734:326.675,113.385:0.0,0.0:0.0,9.13639e-11,1.0
+chr1	7101482	.	TTGTTGTTGTTGTTG	.	.	.	END=7101496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,11,0,3:5,25:4,3:224.371:326.675,113.385:0.0,0.0:0.0,7.60404e-08,1.0
+chr1	7101721	.	AACAACAACAAC	.	.	.	END=7101732;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,15,0,3:4,26:3,3:260.772:326.675,113.385:0.0,0.0:0.0,4.34561e-08,1.0
+chr1	7102309	.	CAACAACAACAACAACAA	.	.	.	END=7102326;RU=caa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977648:6,6:6-6,6-6:9,14,0,2:6,9:4,1|5,1:178.927:326.675,113.385:0.0,0.0:7.69728e-23,0.0128845,0.987142
+chr1	7112567	.	TGCTTGCTTGCT	.	.	.	END=7112578;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.610326:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.7523:326.675,113.385:0.0,0.0:3.60438e-13,0.15294,0.847136
+chr1	7112580	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=7112635;RU=tccc;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0395119:9,9:4-9,4-9:0,1,0,6:NULL:3,2|4,2|7,1|8,1:51.8568:326.675,113.385:1.05556,1.05556:1.0,0.0,0.0
+chr1	7112643	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7112706;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0231414:17,17:11-17,11-17:0,1,0,3:NULL:5,1|16,1|17,1:30.1058:326.675,113.385:2.17123,2.17123:1.44707e-15,0.562026,0.438073
+chr1	7114417	.	TATTTATTTATT	.	.	.	END=7114428;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999531:3,3:3-3,3-3:14,12,0,3:3,14:2,3:194.42:326.675,113.385:0.0,0.0:0.0,0.000209233,0.999795
+chr1	7114880	.	GTTTGTTTGTTT	.	.	.	END=7114891;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,10,0,2:3,39:2,2:260.0:326.675,113.385:0.0,0.0:0.0,5.14724e-12,1.0
+chr1	7114905	.	TGCCTGCCTGCCTGCCTGCC	.	.	.	END=7114924;RU=tgcc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:32,19,0,9:5,32:3,5|4,4:364.328:326.675,113.385:0.0,0.0:0.0,7.61377e-10,1.0
+chr1	7114923	.	CCTTCCTTCCTT	.	.	.	END=7114934;RU=cctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:294.268:326.675,113.385:0.0,0.0:0.0,1.28063e-10,1.0
+chr1	7115852	.	CAACAACAACAA	.	.	.	END=7115863;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-10,4-10:21,16,0,0:4,21:NULL:229.452:326.675,113.385:2.98215,2.98215:0.0,5.39507e-06,0.999995
+chr1	7115879	.	AACCAACCAACCAACCAACC	.	.	.	END=7115898;RU=aacc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999855:5,5:5-5,5-5:16,15,0,3:5,16:2,2|4,1:224.039:326.675,113.385:0.0,0.0:0.0,0.000123741,0.999879
+chr1	7116409	.	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7116432;RU=ttg;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:20,13,0,5:8,20:5,1|6,3|7,1:239.316:326.675,113.385:0.0,0.0:0.0,4.78065e-06,0.999995
+chr1	7117084	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=7117101;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99988:6,6:6-6,6-6:16,11,0,3:6,16:5,3:187.085:326.675,113.385:0.0,0.0:4.64e-43,5.67073e-05,0.999947
+chr1	7123652	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATA	.	.	END=7123683;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0176259:14,14:14-16,14-16:0,2,0,0:NULL:NULL:18.051:326.675,113.385:0.668445,0.668445:0.262568,0.499919,0.237526
+chr1	7123681	.	ATAGATAGATAGATAG	.	.	.	END=7123696;RU=atag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.467441:4,4:4-4,4-4:3,3,0,2:4,3:3,2:52.7516:326.675,113.385:0.139319,0.139319:7.90252e-07,0.195937,0.804113
+chr1	7127713	.	ATGCATGCATGC	.	.	.	END=7127724;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999502:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.86:326.675,113.385:0.0,0.0:0.0,0.000298726,0.999704
+chr1	7129508	.	GCCTGCCTGCCT	.	.	.	END=7129519;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:188.359:326.675,113.385:0.0,0.0:0.0,8.97093e-07,1.0
+chr1	7129995	.	AGCAGCAGCAGC	.	.	.	END=7130006;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:40,14,0,0:4,40:NULL:287.299:326.675,113.385:0.0,0.0:0.0,8.80671e-12,1.0
+chr1	7138899	.	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	.	.	.	END=7138976;RU=cctctc;PERIOD=6;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.611322:13,13:11-13,11-13:4,15,0,22:13,4:3,2|4,5|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2:308.531:326.675,113.385:0.474835,0.474835:6.11111e-08,0.261255,0.738746
+chr1	7139015	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7139054;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.615788:20,22:20-20,19-22:21,16,0,15:19,6|20,15:7,1|9,1|10,1|12,1|14,4|16,1|17,2|19,3|22,1:384.84:326.675,113.385:0.0,1.01136:3.32272e-17,0.000540725,0.999462
+chr1	7139855	.	CAACAACAACAA	.	.	.	END=7139866;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:29,22,0,2:4,29:3,2:332.281:326.675,113.385:0.0,0.0:0.0,8.94474e-09,1.0
+chr1	7141910	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7141955;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.828414:23,23:20-23,20-23:9,33,0,35:22,2|23,7:5,2|6,2|8,2|9,5|10,2|12,1|13,3|14,9|16,1|18,2|19,2|20,1|21,1|22,1|23,1:617.134:326.675,113.385:1.08749,1.08749:7.09369e-14,0.154714,0.845364
+chr1	7142903	.	TTTATTTATTTA	.	.	.	END=7142914;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-4,3-4:21,3,0,0:3,21:NULL:110.108:326.675,113.385:0.298675,0.298675:0.0,2.16394e-06,1.0
+chr1	7149749	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=7149768;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:33,18,0,9:10,33:5,2|6,2|7,2|9,3:372.271:326.675,113.385:0.0,0.0:0.0,1.25285e-09,1.0
+chr1	7150526	.	CAGCCAGCCAGC	.	.	.	END=7150537;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:42,13,0,0:3,42:NULL:281.387:326.675,113.385:0.0,0.0:0.0,1.12619e-12,1.0
+chr1	7151580	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7151625;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.948189:22,23:21-23,22-23:10,15,0,21:21,2|22,3|23,5:5,2|7,1|8,1|11,2|12,2|13,2|14,3|15,1|17,1|19,1|20,1|22,4:357.742:326.675,113.385:0.554102,0.317759:0.00154081,0.961704,0.0368281
+chr1	7152237	.	GTTGTTGTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=7152266;RU=gtt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:24,11,0,7:10,24:3,1|6,1|8,2|9,3:248.698:326.675,113.385:0.0,0.0:0.0,2.10796e-07,1.0
+chr1	7157339	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7157358;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999938:4,4:4-4,4-4:17,12,0,2:4,17:3,2:192.613:326.675,113.385:0.0,0.0:0.0,4.32609e-05,0.999957
+chr1	7157442	.	TTTTGGTTTTTGGTTTTTGGT	.	.	.	END=7157462;RU=ttttggt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:175.786:326.675,113.385:0.0,0.0:0.0,8.52949e-06,0.999994
+chr1	7157813	.	CAAACAAACAAACAAA	.	.	.	END=7157828;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,24,0,5:4,23:3,5:345.664:326.675,113.385:0.0,0.0:0.0,5.28929e-07,1.0
+chr1	7164237	.	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	.	.	.	END=7164331;RU=tctct;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.134004:19,19:11-19,11-19:2,20,0,17:19,2:3,2|5,1|6,1|7,3|8,1|9,1|10,1|12,1|13,1|14,2|15,2|18,1:316.316:326.675,113.385:2.63675,2.63675:0.000196628,0.75379,0.246027
+chr1	7165649	.	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	.	END=7165672;RU=tttgtt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997965:4,4:4-4,4-4:11,22,0,5:4,11:3,5:280.981:326.675,113.385:0.0,0.0:2.16762e-36,0.00154586,0.998459
+chr1	7167675	.	TTTGTTTGTTTG	.	.	.	END=7167686;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999928:3,3:3-3,3-3:17,3,0,0:3,17:NULL:92.8925:326.675,113.385:0.0,0.0:0.0,3.49392e-05,0.999964
+chr1	7172621	.	AAAAGAAAAGAAAAG	.	.	.	END=7172635;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,9,0,2:3,30:2,2:218.999:326.675,113.385:0.0,0.0:0.0,3.21717e-09,1.0
+chr1	7173577	.	ACACACACACAC	.	.	.	END=7173588;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:35,13,0,0:6,35:NULL:256.223:326.675,113.385:0.0990099,0.0990099:0.0,3.04857e-10,1.0
+chr1	7179754	.	AATAATAATAATAAT	.	.	.	END=7179768;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998277:5,5:4-5,4-5:12,11,0,2:5,12:4,2:166.309:326.675,113.385:0.36513,0.36513:2.64615e-31,0.00105222,0.998952
+chr1	7183424	.	AAGAAAGAAAGAAAGA	.	.	.	END=7183439;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,9,0,3:4,35:2,1|3,2:247.573:326.675,113.385:0.0,0.0:0.0,9.05384e-11,1.0
+chr1	7187849	.	TGTGTGTGTGTGTG	.	.	.	END=7187862;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999325:7,7:7-7,7-7:14,9,0,0:7,14:NULL:139.81:326.675,113.385:0.0,0.0:6.28781e-31,0.000398072,0.999605
+chr1	7189612	.	AATCAATCAATC	.	.	.	END=7189623;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-4,3-4:19,6,0,0:3,19:NULL:132.971:326.675,113.385:0.382696,0.382696:0.0,1.15177e-05,0.999987
+chr1	7196731	.	GGGTGGGTGGGT	.	.	.	END=7196742;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.265731:3,3:2-6,2-6:2,21,0,0:3,2:NULL:186.44:326.675,113.385:0.686818,0.686818:5.23069e-06,0.314433,0.685577
+chr1	7200628	.	TATTTATTTATT	.	.	.	END=7200639;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.93621:3,3:3-3,3-3:7,4,0,0:3,7:NULL:63.2243:326.675,113.385:0.0,0.0:1.08546e-20,0.0320985,0.967963
+chr1	7202878	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7202915;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.474592:19,19:19-20,19-20:11,19,0,16:19,9|20,2:4,1|6,1|8,2|9,1|11,4|13,2|16,1|17,2|18,2:353.673:326.675,113.385:0.478127,0.478127:1.97729e-13,0.00220667,0.997799
+chr1	7211598	.	TTAATTAATTAA	.	.	.	END=7211609;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999911:3,3:3-3,3-3:16,6,0,0:3,16:NULL:121.627:326.675,113.385:0.0,0.0:0.0,5.47336e-05,0.999948
+chr1	7211666	.	TTTATTTATTTA	.	.	.	END=7211677;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,18,0,0:3,22:NULL:247.566:326.675,113.385:0.0,0.0:0.0,1.2383e-06,1.0
+chr1	7211691	.	ATTGATTGATTG	.	.	.	END=7211702;RU=attg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,16,0,2:3,29:2,2:269.281:326.675,113.385:0.0,0.0:0.0,6.33694e-09,1.0
+chr1	7217580	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=7217607;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.860925:14,14:10-15,10-15:7,15,0,4:14,7:6,1|9,1|10,1|12,1:198.8:326.675,113.385:2.02736,2.02736:1.63669e-09,0.0777891,0.922306
+chr1	7219811	.	ACACACACACACACACACACACACACAC	.	.	.	END=7219838;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:14,14:14-14,14-14:18,8,0,9:14,18:6,1|7,3|8,2|9,2|14,1:222.087:326.675,113.385:0.0990099,0.0990099:1.05852e-33,3.29776e-05,0.99997
+chr1	7226245	.	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	.	.	.	END=7226304;RU=ggcagg;PERIOD=6;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.550706:10,10:3-10,3-10:3,20,0,13:10,3:2,1|3,1|4,2|6,1|7,1|8,3|9,4:288.409:326.675,113.385:1.81796,1.81796:2.69798e-05,0.369363,0.630662
+chr1	7227370	.	AAATAAAATAAAATAAAATAAAATA	.	.	.	END=7227394;RU=aaata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,10,0,4:5,23:3,2|4,2:209.855:326.675,113.385:0.0,0.0:0.0,4.30756e-07,1.0
+chr1	7240279	.	ATTTATTTATTT	.	.	.	END=7240290;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:153.32:326.675,113.385:0.0,0.0:0.0,1.07333e-05,0.999993
+chr1	7240750	.	ATGCATGCATGC	.	.	.	END=7240761;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997102:3,3:3-3,3-3:12,9,0,0:3,12:NULL:128.833:326.675,113.385:0.0,0.0:1.46053e-35,0.00175663,0.998247
+chr1	7241788	.	TCTCTCTCTCTCTC	.	.	.	END=7241801;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99991:7,7:7-7,7-7:17,4,0,0:7,17:NULL:106.626:326.675,113.385:0.0,0.0:1.80641e-38,5.65364e-05,0.999947
+chr1	7245079	.	ATAATAATAATA	.	.	.	END=7245090;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.946898:4,4:4-4,4-4:8,13,0,0:4,8:NULL:150.095:326.675,113.385:0.0,0.0:7.85469e-21,0.0389249,0.961143
+chr1	7247751	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7247798;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.312892:24,29:12-24,12-29:5,11,0,13:24,5:6,2|7,1|8,1|9,1|10,1|12,1|13,2|15,1|19,1|21,1|29,1:231.449:326.675,113.385:4.3687,7.89588:8.50332e-13,1.16424e-06,1.0
+chr1	7253471	.	TAAATAAATAAA	.	.	.	END=7253482;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995584:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.4252:326.675,113.385:0.0,0.0:3.59897e-33,0.00242419,0.997585
+chr1	7253491	.	ATATATATATATAT	.	.	.	END=7253504;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999227:7,7:7-7,7-7:14,5,0,0:7,14:NULL:101.671:326.675,113.385:0.0,0.0:1.73846e-27,0.000431609,0.999569
+chr1	7254256	.	CCCACCCACCCA	.	.	.	END=7254267;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999886:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.393:326.675,113.385:0.0,0.0:0.0,7.30345e-05,0.999926
+chr1	7256849	.	ATTTATTTATTT	.	.	.	END=7256860;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:241.71:326.675,113.385:0.0,0.0:0.0,1.21702e-08,1.0
+chr1	7260017	.	TATTATTATTATTATTATTATTATTAT	.	.	.	END=7260043;RU=tat;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999432:9,9:9-10,9-10:15,13,0,5:9,15:4,2|6,1|8,2:225.477:326.675,113.385:0.322657,0.322657:6.9475e-26,0.000247089,0.999757
+chr1	7267550	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7267573;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999214:12,12:11-12,11-12:24,10,0,8:11,3|12,21:7,1|8,1|9,2|10,2|11,2:263.425:326.675,113.385:0.169767,0.169767:3.8886e-28,0.000792244,0.999211
+chr1	7269602	.	TGTTTGTTTGTT	.	.	.	END=7269613;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,23,0,0:3,30:NULL:328.499:326.675,113.385:0.0,0.0:0.0,1.00681e-08,1.0
+chr1	7269942	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7269983;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.957569:21,21:21-22,21-22:21,21,0,14:19,2|21,16|22,3:4,1|5,2|6,2|7,1|11,2|13,1|14,1|15,2|17,1|18,1:410.119:326.675,113.385:0.480581,0.480581:1.11615e-18,0.00176366,0.99824
+chr1	7281471	.	AGCAGCAGCAGC	.	.	.	END=7281482;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,12,0,2:4,27:3,2:231.62:326.675,113.385:0.0,0.0:0.0,4.11805e-08,1.0
+chr1	7281705	.	ACCCACCCACCC	.	.	.	END=7281716;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994423:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.602:326.675,113.385:0.0,0.0:1.21422e-32,0.00349456,0.996513
+chr1	7287856	.	CTGCTGCTGCTG	.	.	.	END=7287867;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,19,0,2:4,28:3,2:295.475:326.675,113.385:0.0,0.0:0.0,1.55583e-08,1.0
+chr1	7289516	.	AACAACAACAACAACAACAACAAC	.	.	.	END=7289539;RU=aac;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:32,21,0,10:8,32:4,3|5,2|6,1|7,4:395.626:326.675,113.385:0.0,0.0:0.0,7.39514e-10,1.0
+chr1	7295421	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=7295444;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985667:6,6:6-6,6-6:10,8,0,2:6,10:2,1|3,1:133.664:326.675,113.385:0.0,0.0:8.02214e-25,0.0101885,0.989835
+chr1	7300043	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7300082;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.271667:20,31:20-21,20-33:5,14,0,11:20,5:7,1|8,2|10,2|11,1|13,1|15,1|16,1|18,1|30,1:249.731:326.675,113.385:0.311527,5.17131:1.2747e-12,9.41717e-07,1.0
+chr1	7308819	.	CTTCCTTCCTTC	.	.	.	END=7308830;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:176.634:326.675,113.385:0.0,0.0:0.0,5.62191e-06,0.999995
+chr1	7311860	.	AATAAATAAATA	.	.	.	END=7311871;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.639:326.675,113.385:0.0,0.0:0.0,3.8687e-06,1.0
+chr1	7312335	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7312382;RU=ga;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.366625:24,24:21-25,21-25:4,11,0,7:24,4:4,1|9,1|13,1|19,2|20,2:184.691:326.675,113.385:1.32681,1.32681:3.50187e-05,0.22487,0.775126
+chr1	7317649	.	TATATATATATATATATATATATATATATATATA	.	.	.	END=7317682;RU=ta;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.214537:17,17:12-17,12-17:3,1,0,0:17,3:NULL:23.9926:326.675,113.385:2.46433,2.46433:0.000415716,0.495034,0.504577
+chr1	7319965	.	TGTTTTGTTTTGTTT	.	.	.	END=7319979;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.419:326.675,113.385:0.0,0.0:0.0,1.10491e-08,1.0
+chr1	7320026	.	CAACAACAACAA	.	.	.	END=7320037;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,8,0,2:4,35:3,2:219.811:326.675,113.385:0.0,0.0:0.0,1.13476e-10,1.0
+chr1	7320521	.	TACATACATACA	.	.	.	END=7320532;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999363:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.282:326.675,113.385:0.0,0.0:0.0,0.000375133,0.999628
+chr1	7321482	.	ACACACACACACAC	.	.	.	END=7321495;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:7,7:6-7,6-7:17,16,0,2:7,17:5,1|6,1:226.164:326.675,113.385:0.169767,0.169767:3.24696e-33,4.78734e-05,0.999955
+chr1	7322714	.	CCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTC	.	.	.	END=7322755;RU=cccttc;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961654:7,7:7-11,7-11:9,0,0,3:7,9:3,1|4,2:58.7664:326.675,113.385:1.93776,1.93776:1.54565e-21,0.0115338,0.988493
+chr1	7322758	.	CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	CCCTCCCTCCCTCCCTCCCTCCCTCCCT	.	.	END=7322825;RU=ccct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.034616:7,7:4-7,4-7:0,0,0,3:NULL:4,1|5,1|7,1:21.8234:326.675,113.385:1.0297,1.0297:1.0,0.0,0.0
+chr1	7322843	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	.	END=7322906;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.392285:16,16:16-16,16-16:3,0,0,3:16,3:3,1|5,1|9,1:35.5546:326.675,113.385:0.0,0.0:3.24348e-05,0.308657,0.691323
+chr1	7328752	.	ACCCACCCACCC	.	.	.	END=7328763;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.757354:3,3:3-3,3-3:5,6,0,0:3,5:NULL:74.6943:326.675,113.385:0.19802,0.19802:2.47669e-12,0.128837,0.871257
+chr1	7336314	.	TTTGTTTGTTTGTTTG	.	.	.	END=7336329;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,15,0,4:4,23:3,4:255.565:326.675,113.385:0.0,0.0:0.0,3.73456e-07,1.0
+chr1	7336498	.	TTGCTTGCTTGC	.	.	.	END=7336509;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:287.118:326.675,113.385:0.0,0.0:0.0,8.91218e-08,1.0
+chr1	7338572	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7338615;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.775999:22,22:15-23,15-23:9,13,0,2:21,2|22,7:8,1|18,1:187.222:326.675,113.385:3.54718,3.54718:4.10557e-09,0.194642,0.805411
+chr1	7338650	.	GAGAGAGAGAGA	.	.	.	END=7338661;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.677083:6,6:5-6,5-6:16,15,0,0:5,2|6,14:NULL:213.658:326.675,113.385:0.481803,0.481803:3.46657e-31,0.322893,0.677118
+chr1	7339588	.	GGAGGGAGGGAG	.	.	.	END=7339599;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.179:326.675,113.385:0.0,0.0:0.0,1.76217e-07,1.0
+chr1	7342098	.	CTTCCTTCCTTC	.	.	.	END=7342109;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:140.672:326.675,113.385:0.0,0.0:0.0,3.06032e-06,1.0
+chr1	7346787	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7346820;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.820877:17,18:17-17,17-18:14,14,0,11:17,11|18,3:6,1|8,1|9,1|10,1|12,4|16,3:286.675:326.675,113.385:0.0,0.51751:2.57552e-17,0.000174086,0.999827
+chr1	7348276	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	.	END=7348327;RU=ctcc;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.299182:13,13:6-13,6-13:3,7,0,10:13,3:2,2|4,2|5,1|6,1|7,1|9,3:147.626:326.675,113.385:3.34451,3.34451:3.97709e-07,0.52238,0.477716
+chr1	7358397	.	GAACGAACGAAC	.	.	.	END=7358408;RU=gaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:3,3:2-3,2-3:18,17,0,0:3,18:NULL:228.634:326.675,113.385:0.382696,0.382696:0.0,2.71399e-05,0.999972
+chr1	7358417	.	GGAGGGAGGGAG	.	.	.	END=7358428;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,15,0,3:3,18:2,3:231.967:326.675,113.385:0.0,0.0:0.0,1.52545e-05,0.999986
+chr1	7358698	.	GTGTGTGTGTGTGT	.	.	.	END=7358711;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:20,19,0,3:7,20:5,3:276.71:326.675,113.385:0.0,0.0:3.9e-44,6.48288e-06,0.999995
+chr1	7360103	.	GCTGGCTGGCTG	.	.	.	END=7360114;RU=gctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,19,0,2:3,20:2,2:266.982:326.675,113.385:0.0,0.0:0.0,8.91998e-06,0.999994
+chr1	7364232	.	AACAACAACAACAACAACAACAACAAC	.	.	.	END=7364258;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998618:9,9:4-9,4-9:23,4,0,9:8,2|9,21:4,2|5,3|7,1|8,3:207.845:326.675,113.385:1.27865,1.27865:0.0,0.00139733,0.998609
+chr1	7369828	.	TTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGT	.	.	.	END=7369877;RU=ttggt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983934:10,10:10-10,10-10:10,17,0,15:10,10:2,1|3,2|4,1|5,4|6,3|8,4:309.264:326.675,113.385:0.0,0.0:4.08607e-26,0.0115998,0.988427
+chr1	7370253	.	TCTATCTATCTATCTATCTATCTATCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7370288;RU=tcta;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.987571:10,10:9-10,9-10:10,15,0,6:10,10:3,2|6,1|9,3:229.725:326.675,113.385:0.382696,0.382696:0.0,0.00361669,0.996391
+chr1	7372684	.	GTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7372697;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.275371:7,17:7-7,6-17:20,4,0,2:6,2|7,18:5,1|17,1:155.27:326.675,113.385:0.0,4.95623:4.12548e-36,0.000283499,0.99972
+chr1	7373113	.	AATAATAATAAT	.	.	.	END=7373124;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999906:4,4:4-4,4-4:17,3,0,0:4,17:NULL:97.0953:326.675,113.385:0.0,0.0:1.44e-43,6.04494e-05,0.999941
+chr1	7374196	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7374220;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:29,5,0,6:5,29:4,6:207.505:326.675,113.385:0.0,0.0:0.0,5.08972e-09,1.0
+chr1	7375130	.	AAGAAGAAGAAG	.	.	.	END=7375141;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:4,4:3-4,3-4:19,7,0,0:4,19:NULL:139.553:326.675,113.385:0.236383,0.236383:0.0,1.34472e-05,0.999987
+chr1	7377589	.	GTGTGTGTGTGT	.	.	.	END=7377600;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:6,6:6-6,6-6:18,13,0,2:6,18:5,2:200.378:326.675,113.385:0.0,0.0:1e-45,1.50686e-05,0.999986
+chr1	7378672	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7378691;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999944:5,5:5-5,5-5:17,7,0,3:5,17:3,1|4,2:158.67:326.675,113.385:0.0,0.0:0.0,2.59651e-05,0.999978
+chr1	7379008	.	GTGTGTGTGTGT	.	.	.	END=7379019;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997376:6,6:2-6,2-6:22,11,0,2:5,2|6,20:4,1|5,1:210.677:326.675,113.385:1.55789,1.55789:2.05557e-35,0.00263789,0.997368
+chr1	7379032	.	CACACACACACACACACACACACACACA	.	.	.	END=7379059;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999089:14,14:10-14,10-14:22,10,0,6:13,3|14,19:6,1|7,1|8,1|10,2|11,1:238.742:326.675,113.385:1.24776,1.24776:1.8e-21,0.000919131,0.999082
+chr1	7382087	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7382106;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993888:4,4:4-4,4-4:11,8,0,0:4,11:NULL:112.713:326.675,113.385:0.0,0.0:4.26474e-36,0.00449055,0.995522
+chr1	7384157	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA	.	.	END=7384198;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.746418:21,22:21-21,21-22:16,17,0,18:21,12|22,4:5,1|6,2|9,1|10,1|11,1|12,2|13,3|14,1|16,2|18,2|20,2:378.127:326.675,113.385:0.0,0.538126:1.12812e-15,9.63829e-05,0.999903
+chr1	7385475	.	CAACAACAACAA	.	.	.	END=7385486;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99995:4,4:4-5,4-5:17,8,0,5:4,17:3,3|4,2:177.236:326.675,113.385:0.412766,0.412766:0.0,6.88485e-06,0.999994
+chr1	7385514	.	AAAACAAAACAAAAC	.	.	.	END=7385528;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:141.849:326.675,113.385:0.0,0.0:0.0,1.66293e-06,1.0
+chr1	7385949	.	ACAAAACAAAACAAAACAAA	.	.	.	END=7385968;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,8,0,0:4,21:NULL:161.162:326.675,113.385:0.0,0.0:0.0,5.3986e-06,0.999995
+chr1	7386148	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7386177;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990378:15,15:15-15,15-15:11,9,0,10:15,11:4,2|8,1|9,1|10,1|12,1|13,3|14,1:210.515:326.675,113.385:0.139319,0.139319:1.95257e-14,0.00320105,0.996807
+chr1	7389238	.	AAAACAAAACAAAAC	.	.	.	END=7389252;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996706:3,3:3-3,3-3:11,6,0,3:3,11:2,3:117.808:326.675,113.385:0.0,0.0:3.58095e-38,0.00114915,0.998854
+chr1	7389561	.	AACAACAACAAC	.	.	.	END=7389572;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.572521:4,4:4-4,4-4:4,4,0,0:4,4:NULL:50.0009:326.675,113.385:0.29703,0.29703:1.07314e-13,0.254933,0.745076
+chr1	7390007	.	ACACACACACAC	.	.	.	END=7390018;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.956369:6,6:6-6,6-6:8,4,0,0:6,8:NULL:64.5737:326.675,113.385:0.0,0.0:3.70441e-17,0.0228166,0.97723
+chr1	7390525	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7390544;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998138:4,4:4-4,4-4:12,5,0,2:4,12:3,2:102.812:326.675,113.385:0.0,0.0:4.38078e-36,0.000734944,0.99927
+chr1	7391902	.	AAACAAACAAAC	.	.	.	END=7391913;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.454772:3,3:1-3,1-3:3,6,0,0:3,3:NULL:64.9642:326.675,113.385:0.390054,0.390054:2.83571e-10,0.286577,0.713424
+chr1	7392178	.	ACACACACACACACACACACACACACAC	.	.	.	END=7392205;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.745438:14,14:13-14,13-14:14,12,0,6:13,3|14,11:5,1|6,1|9,1|10,2|11,1:220.514:326.675,113.385:0.469019,0.469019:1.61047e-11,0.254054,0.745954
+chr1	7392363	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7392394;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.293661:8,12:8-8,8-12:18,6,0,6:8,18:4,1|7,3|8,1|11,1:185.442:326.675,113.385:0.0,1.79249:0.0,1.26003e-08,1.0
+chr1	7393303	.	TAAATAAATAAATAAA	.	.	.	END=7393318;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.572755:4,4:4-4,4-4:4,1,0,0:4,4:NULL:24.6243:326.675,113.385:0.0,0.0:2.61914e-12,0.227011,0.773022
+chr1	7395935	.	TATATTATATTATAT	.	.	.	END=7395949;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990461:3,3:3-3,3-3:10,2,0,0:3,10:NULL:56.8744:326.675,113.385:0.0,0.0:3.51705e-29,0.00420052,0.995809
+chr1	7397361	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=7397400;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.904946:20,20:19-21,19-21:7,10,0,10:20,7:6,1|7,1|8,1|9,2|18,4|19,1:201.872:326.675,113.385:0.424474,0.424474:6.32146e-09,0.0305788,0.969479
+chr1	7398005	.	CCCGCCCGCCCG	.	.	.	END=7398016;RU=cccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.369:326.675,113.385:0.0,0.0:0.0,3.3594e-07,1.0
+chr1	7399995	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=7400022;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999872:7,7:2-7,2-7:16,7,0,5:7,16:2,1|3,1|4,1|6,2:168.405:326.675,113.385:2.26211,2.26211:6.47696e-40,7.5926e-05,0.999926
+chr1	7400995	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7401018;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:26,16,0,11:6,26:2,1|3,5|4,3|5,2:331.38:326.675,113.385:0.0,0.0:0.0,5.8558e-08,1.0
+chr1	7401260	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7401291;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:16,16:16-16,16-16:31,17,0,6:15,3|16,28:7,1|11,2|12,1|13,1|15,1:351.031:326.675,113.385:0.0,0.0:5.42445e-32,1.93846e-06,1.0
+chr1	7403154	.	ATTTATTTATTT	.	.	.	END=7403165;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:138.461:326.675,113.385:0.0,0.0:0.0,7.52932e-08,1.0
+chr1	7403493	.	ACACACACACACACAC	.	.	.	END=7403508;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99689:8,8:8-9,8-9:12,16,0,4:8,12:5,2|6,2:226.827:326.675,113.385:0.334882,0.334882:4.59965e-23,0.0016035,0.998404
+chr1	7403509	.	CCACCACCACCACCACCACCA	.	.	.	END=7403529;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99736:7,7:7-7,7-7:12,15,0,4:7,12:4,2|5,2:216.079:326.675,113.385:0.0,0.0:2.04253e-36,0.00152758,0.998475
+chr1	7403538	.	AAATAAATAAAT	.	.	.	END=7403549;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999353:3,3:3-3,3-3:14,12,0,0:3,14:NULL:167.036:326.675,113.385:0.0,0.0:1.7057e-41,0.000411744,0.999591
+chr1	7407348	.	TAATAATAATAATAATAA	.	.	.	END=7407365;RU=taa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999988:6,6:5-6,5-6:18,12,0,5:6,18:4,2|5,3:225.568:326.675,113.385:0.195027,0.195027:1.25e-43,9.64497e-06,0.999993
+chr1	7407486	.	TATATATATATA	.	.	.	END=7407497;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987407:6,6:6-6,6-6:10,13,0,0:6,10:NULL:161.381:326.675,113.385:0.0,0.0:6.72984e-18,0.00804479,0.991974
+chr1	7407553	.	ACACACACACAC	.	.	.	END=7407564;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,7,0,0:6,25:NULL:165.558:326.675,113.385:0.0,0.0:0.0,1.80849e-07,1.0
+chr1	7409238	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7409277;RU=aaaac;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982309:8,8:7-8,7-8:9,3,0,8:8,9:3,1|4,3|6,1|7,3:120.301:326.675,113.385:0.45695,0.45695:1.97341e-23,0.00575558,0.994257
+chr1	7410953	.	AGAAGAAGAAGA	.	.	.	END=7410964;RU=aga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998108:4,4:4-4,4-4:13,16,0,0:4,13:NULL:196.156:326.675,113.385:0.0,0.0:4.49557e-31,0.00144172,0.998564
+chr1	7416243	.	ATTTATTTATTT	.	.	.	END=7416254;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.715:326.675,113.385:0.0,0.0:0.0,4.6248e-07,1.0
+chr1	7421873	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7421914;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.686723:21,21:20-22,20-22:5,16,0,15:21,5:4,1|8,1|9,1|10,2|11,1|14,2|15,1|16,1|17,1|18,1|19,1|20,2:290.947:326.675,113.385:0.626507,0.626507:4.14178e-06,0.120716,0.879379
+chr1	7423553	.	TGGGTTGGGTTGGGT	.	.	.	END=7423567;RU=tgggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.697:326.675,113.385:0.0,0.0:0.0,2.56633e-06,1.0
+chr1	7423835	.	CCAGCCAGCCAG	.	.	.	END=7423846;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.014:326.675,113.385:0.0,0.0:0.0,8.03606e-06,0.999994
+chr1	7424052	.	ATATATATATATAT	.	.	.	END=7424065;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998037:7,7:6-8,6-8:13,10,0,0:7,13:NULL:137.626:326.675,113.385:0.344122,0.344122:1.78319e-21,0.00109507,0.998907
+chr1	7425278	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7425323;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.513251:23,23:21-27,21-27:20,24,0,18:21,3|22,4|23,11|24,2:5,4|9,1|10,1|11,3|14,2|15,4|19,1|20,2:473.466:326.675,113.385:1.61365,1.61365:3.31356e-10,0.476846,0.523247
+chr1	7426578	.	TCTTTCTTTCTT	.	.	.	END=7426589;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.924749:3,3:3-3,3-3:7,5,0,0:3,7:NULL:72.4247:326.675,113.385:0.0,0.0:1.24085e-20,0.0349296,0.965131
+chr1	7426730	.	TATATATATATATATATATATATATATATATATATATATATATATATA	TA	.	.	END=7426777;RU=ta;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.00195412:1,1:1-1,1-1:0,4,0,0:NULL:NULL:34.6221:326.675,113.385:0.0,0.0:0.371713,0.539518,0.0888731
+chr1	7431725	.	ATTATTATTATT	.	.	.	END=7431736;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,9,0,0:4,26:NULL:183.414:326.675,113.385:0.0,0.0:0.0,1.08437e-07,1.0
+chr1	7440876	.	TTCCTTCCTTCC	.	.	.	END=7440887;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:249.022:326.675,113.385:0.0,0.0:0.0,1.88782e-06,1.0
+chr1	7440950	.	AAACAAACAAAC	.	.	.	END=7440961;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:221.718:326.675,113.385:0.0,0.0:0.0,7.89085e-06,0.999994
+chr1	7444083	.	ATATATATATATAT	.	.	.	END=7444096;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.952448:7,7:7-7,7-7:8,2,0,0:7,8:NULL:49.8835:326.675,113.385:0.0,0.0:2.21982e-14,0.0249351,0.975111
+chr1	7447332	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7447355;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:27,7,0,5:6,27:2,2|3,1|4,1|5,1:210.645:326.675,113.385:0.0,0.0:0.0,4.00341e-08,1.0
+chr1	7449579	.	TCTGTCTCTGTCTCTGTCTCTGTC	.	.	.	END=7449602;RU=tctgtc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999342:4,4:3-4,3-4:15,13,0,0:4,15:NULL:180.716:326.675,113.385:0.311527,0.311527:6e-45,0.000577142,0.999424
+chr1	7450712	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7450769;RU=tc;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0285637:32,32:25-32,25-32:0,7,0,9:NULL:4,2|5,1|8,1|13,1|27,2|28,1|32,1:141.607:326.675,113.385:1.50058,1.50058:9.70053e-09,0.34967,0.650364
+chr1	7453756	.	AGCAGCAGCAGC	.	.	.	END=7453767;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,17,0,0:4,27:NULL:265.752:326.675,113.385:0.0,0.0:0.0,1.23179e-07,1.0
+chr1	7456598	.	TTTATTTATTTA	.	.	.	END=7456609;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999931:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.423:326.675,113.385:0.0,0.0:0.0,6.4736e-05,0.999939
+chr1	7460799	.	ATTTATTTATTT	.	.	.	END=7460810;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.937:326.675,113.385:0.0,0.0:0.0,6.82864e-07,1.0
+chr1	7461208	.	CACACACACACACACACACACACACA	.	.	.	END=7461233;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99988:13,13:4-13,4-13:29,18,0,13:12,4|13,25:5,1|6,2|7,1|8,1|9,2|10,3|11,1|12,1|13,1:406.177:326.675,113.385:2.43794,2.43794:8.67065e-38,0.000120026,0.99988
+chr1	7466892	.	TAAATAAATAAA	.	.	.	END=7466903;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999881:3,3:3-3,3-3:16,8,0,0:3,16:NULL:134.134:326.675,113.385:0.0,0.0:0.0,7.06065e-05,0.999933
+chr1	7466980	.	AAAGTTTAAAGTTTAAAGTTT	.	.	.	END=7467000;RU=aaagttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999723:3,3:3-3,3-3:15,4,0,0:3,15:NULL:96.7021:326.675,113.385:0.0,0.0:0.0,0.000150997,0.99985
+chr1	7468038	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=7468113;RU=tttc;PERIOD=4;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.020238:16,16:7-19,7-19:0,7,0,13:NULL:7,2|10,1|11,2|12,5|13,1|14,1|16,1:158.469:326.675,113.385:3.56232,3.56232:0.312801,0.5122,0.175013
+chr1	7468830	.	AAAACAAAACAAAAC	.	.	.	END=7468844;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999755:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.313:326.675,113.385:0.0,0.0:0.0,0.00016387,0.999841
+chr1	7469326	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=7469375;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984792:25,25:20-27,20-27:11,23,0,12:25,11:6,2|7,2|9,1|13,1|14,2|18,1|19,2|25,1:366.528:326.675,113.385:1.77125,1.77125:1.29155e-26,0.00944488,0.990575
+chr1	7469376	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7469415;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.920153:20,20:20-20,20-20:7,24,0,21:20,7:5,2|6,1|7,4|8,1|9,1|10,1|11,2|12,2|14,2|15,2|16,1|18,1|19,1:420.393:326.675,113.385:0.0,0.0:4.29867e-09,0.0449381,0.955134
+chr1	7473898	.	AAACAAACAAAC	.	.	.	END=7473909;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999257:3,3:3-3,3-3:14,11,0,0:3,14:NULL:154.952:326.675,113.385:0.0,0.0:9.73e-43,0.000477853,0.999523
+chr1	7475210	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=7475227;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:177.338:326.675,113.385:0.0,0.0:0.0,3.60068e-07,1.0
+chr1	7475765	.	TATTATTATTAT	.	.	.	END=7475776;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993907:4,4:4-4,4-4:11,6,0,0:4,11:NULL:98.0058:326.675,113.385:0.0,0.0:7.5814e-37,0.00390186,0.99611
+chr1	7482108	.	TTTTTTGTTTTTTGTTTTTTGTTTTTTG	.	.	.	END=7482135;RU=ttttttg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999114:4,4:4-4,4-4:13,7,0,5:4,13:2,1|3,4:149.54:326.675,113.385:0.0,0.0:3.87466e-38,0.000414173,0.99959
+chr1	7482227	.	ACCCACCCACCC	.	.	.	END=7482238;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.951091:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.78:326.675,113.385:0.19802,0.19802:4.98595e-22,0.0337134,0.966351
+chr1	7492065	.	GGAGGGAGGGAG	.	.	.	END=7492076;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:154.508:326.675,113.385:0.0,0.0:0.0,5.77157e-07,1.0
+chr1	7493936	.	TAAATAAATAAATAAA	.	.	.	END=7493951;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999022:4,4:4-4,4-4:13,6,0,4:4,13:3,4:131.793:326.675,113.385:0.0,0.0:1.34938e-38,0.000363209,0.999637
+chr1	7495072	.	AAAATAAAATAAAAT	.	.	.	END=7495086;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999969:3,3:3-3,3-3:18,17,0,0:3,18:NULL:232.209:326.675,113.385:0.0,0.0:0.0,3.56805e-05,0.999964
+chr1	7497345	.	CAAACAAACAAA	.	.	.	END=7497356;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.094:326.675,113.385:0.0,0.0:0.0,2.8124e-06,1.0
+chr1	7500168	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=7500193;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.419391:12,14:12-13,12-14:9,7,0,0:12,3|13,3|14,3:NULL:116.493:326.675,113.385:0.538126,0.588255:0.000815859,0.579807,0.419465
+chr1	7502120	.	ACACACACACACAC	.	.	.	END=7502133;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999841:7,7:6-7,6-7:28,19,0,3:6,3|7,25:4,1|5,2:329.444:326.675,113.385:0.253975,0.253975:0.0,0.000161628,0.999841
+chr1	7507479	.	TTTTAAATTTTAAATTTTAAA	.	.	.	END=7507499;RU=ttttaaa;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997651:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.947:326.675,113.385:0.0,0.0:1.18906e-35,0.00174143,0.998262
+chr1	7512509	.	TAAATAAATAAA	.	.	.	END=7512520;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995942:3,3:3-3,3-3:11,7,0,0:3,11:NULL:105.003:326.675,113.385:0.0,0.0:1.63034e-36,0.00216985,0.997837
+chr1	7518438	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7518481;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.769607:22,22:21-22,21-22:9,11,0,14:21,2|22,7:5,2|6,1|7,1|11,2|12,1|13,2|14,1|15,2|16,2:254.253:326.675,113.385:0.398507,0.398507:6.15149e-07,0.210266,0.789782
+chr1	7520010	.	TGTGTGTGTGTGTG	.	.	.	END=7520023;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:28,8,0,0:7,28:NULL:187.502:326.675,113.385:0.0,0.0:4.34125e-35,6.38469e-08,1.0
+chr1	7520572	.	AAACAAAACAAAACA	.	.	.	END=7520586;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,6,0,0:3,25:NULL:150.359:326.675,113.385:0.0,0.0:0.0,1.45848e-07,1.0
+chr1	7522440	.	ATACATACATAC	.	.	.	END=7522451;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999312:3,3:3-3,3-3:14,6,0,0:3,14:NULL:110.981:326.675,113.385:0.0,0.0:0.0,0.000350902,0.999651
+chr1	7522568	.	TATATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=7522619;RU=ta;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.020438:23,23:26-26,26-26:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
+chr1	7522982	.	TTCTTTCTTTCTTTCT	.	.	.	END=7522997;RU=ttct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:147.627:326.675,113.385:0.0,0.0:0.0,1.34801e-06,1.0
+chr1	7524309	.	TAAAATAAAATAAAATAAAATAAAA	.	.	.	END=7524333;RU=taaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959119:5,5:5-5,5-5:7,11,0,5:5,7:4,5:166.74:326.675,113.385:0.0,0.0:2.65051e-20,0.0202231,0.979819
+chr1	7524638	.	AACAAACAAACAAACAAACA	.	.	.	END=7524657;RU=aaca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:3-5,3-5:24,9,0,6:5,24:3,2|4,4:220.454:326.675,113.385:0.43384,0.43384:0.0,1.91326e-07,1.0
+chr1	7527088	.	TTTTATTTTATTTTA	.	.	.	END=7527102;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:198.701:326.675,113.385:0.0,0.0:0.0,6.87673e-06,0.999994
+chr1	7527397	.	AATAAATAAATA	.	.	.	END=7527408;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.585:326.675,113.385:0.0,0.0:0.0,5.10849e-06,0.999995
+chr1	7532994	.	TCTCTCTCTCTCTCTC	.	.	.	END=7533009;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:32,24,0,8:8,32:5,3|6,2|7,3:406.392:326.675,113.385:0.0,0.0:0.0,1.17275e-09,1.0
+chr1	7538575	.	TTAATTAATTAATTAA	.	.	.	END=7538590;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999905:4,4:4-4,4-4:17,8,0,0:4,17:NULL:137.243:326.675,113.385:0.0,0.0:0.0,6.42069e-05,0.99994
+chr1	7542839	.	TCTCCTCTCCTCTCC	.	.	.	END=7542853;RU=tctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:172.591:326.675,113.385:0.0,0.0:0.0,8.90944e-08,1.0
+chr1	7544211	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=7544230;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,11,0,2:4,19:3,2:191.689:326.675,113.385:0.0,0.0:0.0,7.93364e-06,0.999994
+chr1	7544358	.	ATATATATATATATAT	.	.	.	END=7544373;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997822:8,8:8-8,8-8:13,10,0,0:8,13:NULL:149.317:326.675,113.385:0.0,0.0:2.6257e-17,0.00140249,0.998603
+chr1	7546856	.	TTTGTTTGTTTG	.	.	.	END=7546867;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,13,0,0:3,32:NULL:240.066:326.675,113.385:0.0,0.0:0.0,1.40992e-09,1.0
+chr1	7549821	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7549896;RU=ag;PERIOD=2;REF=38.0;EXPTHRESH=38	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.240765:37,37:35-37,35-37:2,14,0,13:37,2:5,1|8,1|9,1|14,2|15,2|16,1|19,1|24,1|27,1|30,1|34,1:243.499:326.675,113.385:0.43384,0.43384:0.619148,0.35909,0.0218496
+chr1	7550748	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=7550765;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.669:326.675,113.385:0.0,0.0:0.0,2.4095e-07,1.0
+chr1	7554806	.	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=7554849;RU=tatt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995921:11,11:11-11,11-11:11,10,0,10:11,11:5,1|6,2|7,2|9,1|10,4:208.914:326.675,113.385:0.0,0.0:1.39714e-23,0.00136196,0.998641
+chr1	7559127	.	GTTAATGGTTAATGGTTAATGGTTAATG	.	.	.	END=7559154;RU=gttaatg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:4,4:4-4,4-4:16,14,0,8:4,16:3,8:247.545:326.675,113.385:0.0,0.0:0.0,5.09107e-05,0.999949
+chr1	7560900	.	TTTATTTATTTATTTATTTA	.	.	.	END=7560919;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:30,8,0,2:5,30:3,1|4,1:207.471:326.675,113.385:0.0,0.0:0.0,5.3766e-09,1.0
+chr1	7570199	.	TTGTTGTTGTTG	.	.	.	END=7570210;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,12,0,0:4,21:NULL:193.419:326.675,113.385:0.0,0.0:0.0,3.83183e-06,1.0
+chr1	7579482	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7579505;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995425:6,6:5-6,5-6:22,11,0,7:5,2|6,20:2,1|3,1|4,1|5,4:251.596:326.675,113.385:0.398507,0.398507:0.0,0.00459544,0.995416
+chr1	7584141	.	AACAACAACAAC	.	.	.	END=7584152;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:152.193:326.675,113.385:0.0,0.0:0.0,3.31203e-06,1.0
+chr1	7586036	.	TGGGTGGGTGGG	.	.	.	END=7586047;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:197.905:326.675,113.385:0.0,0.0:0.0,4.50361e-05,0.999956
+chr1	7590013	.	ATGTATGTATGTATGTATGTATGTATGT	.	.	.	END=7590040;RU=atgt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:27,15,0,11:7,27:2,1|3,2|4,2|5,3|6,3:334.025:326.675,113.385:0.0,0.0:6.34877e-36,7.12813e-08,1.0
+chr1	7591071	.	GAGGAGGAGGAGGAGGAG	.	.	.	END=7591088;RU=gag;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,24,0,2:6,22:4,1|5,1:315.295:326.675,113.385:0.0,0.0:0.0,1.8212e-06,1.0
+chr1	7592319	.	CAAACAAACAAA	.	.	.	END=7592330;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997808:3,3:3-3,3-3:12,2,0,0:3,12:NULL:65.2842:326.675,113.385:0.0,0.0:6.32806e-39,0.000946074,0.999058
+chr1	7593902	.	AAACAAACAAACAAAC	.	.	.	END=7593917;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,18,0,4:4,22:2,1|3,3:291.754:326.675,113.385:0.0,0.0:0.0,2.25469e-06,1.0
+chr1	7604547	.	TTAATTAATTAA	.	.	.	END=7604558;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:3,3:3-3,3-3:17,16,0,0:3,17:NULL:206.927:326.675,113.385:0.0,0.0:0.0,4.86683e-05,0.999955
+chr1	7606004	.	CTGCTGCTGCTG	.	.	.	END=7606015;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:33,17,0,0:4,33:NULL:284.495:326.675,113.385:0.0,0.0:0.0,1.60651e-09,1.0
+chr1	7614755	.	TCCTCCTCCTCC	.	.	.	END=7614766;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:39,13,0,3:4,39:3,3:289.997:326.675,113.385:0.0,0.0:0.0,7.01508e-12,1.0
+chr1	7618269	.	AATAAATAAATA	.	.	.	END=7618280;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,2,0,0:3,25:NULL:115.743:326.675,113.385:0.0,0.0:0.0,1.26847e-07,1.0
+chr1	7621644	.	CTTTCTTTCTTT	.	.	.	END=7621655;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.959:326.675,113.385:0.0,0.0:0.0,1.43963e-07,1.0
+chr1	7624737	.	CAACAACAACAACAACAACAACAACAACAA	.	.	.	END=7624766;RU=caa;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:24,9,0,6:10,24:6,2|7,2|9,2:226.838:326.675,113.385:0.0,0.0:0.0,2.91704e-07,1.0
+chr1	7626618	.	TTATTTATTTATTTAT	.	.	.	END=7626633;RU=ttat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,3,0,2:4,19:2,1|3,1:115.882:326.675,113.385:0.0,0.0:0.0,6.68964e-06,0.999994
+chr1	7630404	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7630451;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.983016:24,25:23-24,23-25:21,13,0,23:23,8|24,11|25,2:4,1|6,1|8,1|10,2|11,1|12,1|14,1|15,1|16,1|17,3|18,2|20,1|21,2|22,2|23,1|24,1|25,1:429.446:326.675,113.385:0.475866,0.848371:1.52509e-19,0.0136464,0.986385
+chr1	7632861	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	.	END=7632920;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930921:15,15:14-15,14-15:8,31,0,22:15,8:3,1|4,4|5,2|6,1|7,1|8,1|9,4|10,3|11,4|13,1:479.498:326.675,113.385:0.499387,0.499387:6.14073e-22,0.0616203,0.938469
+chr1	7633359	.	ACACACACACACACACACACACACACACACACACACAC	.	.	.	END=7633396;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.79191:19,19:19-19,19-19:6,7,0,8:19,6:8,1|10,1|12,2|13,1|15,1|17,1|18,1:157.17:326.675,113.385:0.0,0.0:1.67294e-08,0.0692101,0.930883
+chr1	7633397	.	ATTAATTAATTA	.	.	.	END=7633408;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99704:3,3:3-3,3-3:12,5,0,0:3,12:NULL:96.7465:326.675,113.385:0.0,0.0:1.72428e-21,0.00151512,0.998489
+chr1	7637624	.	CACACACACACACA	.	.	.	END=7637637;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999836:7,7:7-9,7-9:27,10,0,0:7,24|8,3:NULL:204.461:326.675,113.385:0.405095,0.405095:1.08056e-35,1.06684e-07,1.0
+chr1	7637849	.	TAATAATAATAA	.	.	.	END=7637860;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:226.901:326.675,113.385:0.0,0.0:0.0,1.6664e-06,1.0
+chr1	7642243	.	AACAACAACAACAACAACAACAACAAC	.	.	.	END=7642269;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994938:9,9:9-10,9-10:11,13,0,7:9,11:4,2|6,1|7,1|8,3:214.352:326.675,113.385:0.46122,0.46122:3.66479e-24,0.00171286,0.998292
+chr1	7644073	.	GGGTGGGTGGGT	.	.	.	END=7644084;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996096:3,3:3-3,3-3:12,36,0,0:3,12:NULL:366.483:326.675,113.385:0.0,0.0:1.17169e-35,0.00335808,0.996649
+chr1	7651115	.	TTTCTTTCTTTC	.	.	.	END=7651126;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99948:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.136:326.675,113.385:0.0,0.0:0.0,0.000349136,0.999652
+chr1	7652360	.	GAGAGAGAGAGAGAGAGA	GAGAGAGA	.	.	END=7652377;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.929022:4,9:4-9,9-9:29,15,0,0:4,5|7,5|9,19:NULL:288.077:326.675,113.385:1.79969,0.0:1.63191e-37,0.99934,0.000661574
+chr1	7658674	.	TTTATTTATTTA	.	.	.	END=7658685;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,12,0,6:3,30:2,6:271.917:326.675,113.385:0.0,0.0:0.0,2.61691e-09,1.0
+chr1	7660964	.	TGCCTGCCTGCCTGCC	.	.	.	END=7660979;RU=tgcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999887:4,4:3-4,3-4:16,7,0,3:4,16:2,1|3,2:152.085:326.675,113.385:0.419363,0.419363:0.0,5.94852e-05,0.999941
+chr1	7660996	.	TCTTTCTTTCTTTCTT	.	.	.	END=7661011;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999809:4,4:4-4,4-4:16,6,0,0:4,16:NULL:120.568:326.675,113.385:0.0,0.0:0.0,0.000139604,0.999864
+chr1	7661246	.	TGTGTGTGTGTGTGTGTGTG	.	.	.	END=7661265;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.970158:10,10:10-11,10-11:20,12,0,5:10,17|11,3:5,1|6,1|7,1|8,2:243.239:326.675,113.385:0.374147,0.374147:2.30016e-25,9.69941e-06,0.999993
+chr1	7661271	.	TTGTTGTTGTTG	.	.	.	END=7661282;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,11,0,0:4,26:NULL:207.408:326.675,113.385:0.0,0.0:0.0,1.57076e-07,1.0
+chr1	7667977	.	GGGGTGGGGTGGGGT	.	.	.	END=7667991;RU=ggggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,25,0,3:3,38:2,3:409.533:326.675,113.385:0.0,0.0:0.0,2.39564e-11,1.0
+chr1	7668272	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7668301;RU=ga;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999955:15,15:15-15,15-15:33,18,0,12:14,5|15,28:5,1|7,1|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,1:408.274:326.675,113.385:0.0990099,0.0990099:3.48e-39,4.78434e-05,0.999955
+chr1	7668463	.	GGAGAGGAGAGGAGA	.	.	.	END=7668477;RU=ggaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.884408:3,3:3-3,3-3:6,16,0,0:3,6:NULL:168.509:326.675,113.385:0.0,0.0:8.96207e-17,0.0784737,0.921624
+chr1	7678104	.	TGTTTTGTTTTGTTT	.	.	.	END=7678118;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999438:3,3:3-3,3-3:14,11,0,0:3,14:NULL:162.108:326.675,113.385:0.0,0.0:2.4e-44,0.00034485,0.999659
+chr1	7684673	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7684693;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998834:7,7:7-7,7-7:13,12,0,4:7,13:4,1|5,2|6,1:193.784:326.675,113.385:0.0,0.0:1.27248e-39,0.000558105,0.999446
+chr1	7686794	.	TTATTTATTTAT	.	.	.	END=7686805;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:156.467:326.675,113.385:0.0,0.0:0.0,2.85844e-07,1.0
+chr1	7688060	.	TATATTATATTATAT	.	.	.	END=7688074;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99878:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.606:326.675,113.385:0.0,0.0:1.23e-43,0.000718745,0.999286
+chr1	7691107	.	CATCATCATCAT	.	.	.	END=7691118;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,17,0,4:4,35:3,4:322.898:326.675,113.385:0.0,0.0:0.0,7.26367e-11,1.0
+chr1	7694774	.	GTTGTTGTTGTTGTTGTT	.	.	.	END=7694791;RU=gtt;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9979:6,6:6-6,6-6:12,8,0,2:6,12:4,1|5,1:136.005:326.675,113.385:0.0,0.0:5.14711e-31,0.00100407,0.998998
+chr1	7694925	.	AAAAACAAAAAACAAAAAACA	.	.	.	END=7694945;RU=aaaaaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:116.335:326.675,113.385:0.0,0.0:0.0,3.64749e-06,1.0
+chr1	7695814	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7695835;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.293335:11,15:11-11,11-15:16,6,0,5:11,16:7,1|10,3|15,1:170.999:326.675,113.385:0.0,1.9624:1.21793e-27,7.70312e-08,1.0
+chr1	7695943	.	ATTTATTTATTTATTT	.	.	.	END=7695958;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999907:4,4:4-4,4-4:17,11,0,0:4,17:NULL:160.39:326.675,113.385:0.0,0.0:1.4e-44,5.94761e-05,0.999941
+chr1	7696936	.	AAGGAAGGAAGG	.	.	.	END=7696947;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:311.19:326.675,113.385:0.0,0.0:0.0,4.7513e-08,1.0
+chr1	7708555	.	TATATATATATATATATATATATATATATATATATATATA	.	.	.	END=7708594;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.210509:20,20:19-20,19-20:2,2,0,0:20,2:NULL:27.8346:326.675,113.385:0.284901,0.284901:0.0129125,0.424261,0.562949
+chr1	7714389	.	TTTATTTATTTA	.	.	.	END=7714400;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998997:3,3:3-3,3-3:13,6,0,2:3,13:2,2:118.63:326.675,113.385:0.0,0.0:5.2e-44,0.000355482,0.999645
+chr1	7716510	.	TTCTTCTTCTTC	.	.	.	END=7716521;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:219.121:326.675,113.385:0.0,0.0:0.0,4.9399e-07,1.0
+chr1	7722901	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7722920;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993087:4,4:4-4,4-4:11,4,0,0:4,11:NULL:82.8366:326.675,113.385:0.0,0.0:1.07704e-37,0.00430158,0.995711
+chr1	7726872	.	GCATGCATGCAT	.	.	.	END=7726883;RU=gcat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,8,0,5:3,25:2,5:204.689:326.675,113.385:0.0,0.0:0.0,6.51567e-08,1.0
+chr1	7730158	.	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	.	.	END=7730267;RU=ttccc;PERIOD=5;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0548084:21,21:8-23,8-23:0,12,0,22:NULL:3,1|4,2|5,1|8,1|9,1|10,1|11,2|13,1|14,2|16,3|18,1|19,2|20,4:268.821:326.675,113.385:5.02335,5.02335:0.261242,0.509873,0.228898
+chr1	7730913	.	TTATTTATTTAT	.	.	.	END=7730924;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999976:3,3:3-3,3-3:17,12,0,2:3,17:2,2:191.298:326.675,113.385:0.0,0.0:0.0,1.77926e-05,0.999986
+chr1	7730966	.	TTAATTAATTAA	.	.	.	END=7730977;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:181.216:326.675,113.385:0.0,0.0:0.0,4.03032e-06,0.999995
+chr1	7731592	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7731635;RU=tc;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.564427:22,24:21-22,21-24:10,17,0,12:21,4|22,6:9,1|11,3|13,1|18,1|19,1|21,3|22,1|24,1:316.193:326.675,113.385:0.298675,1.12871:1.40782e-18,0.000296911,0.999705
+chr1	7731916	.	TGTATGTATGTA	.	.	.	END=7731927;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999697:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.413:326.675,113.385:0.0,0.0:0.0,0.00016162,0.999841
+chr1	7731957	.	TGTATGTATGTA	.	.	.	END=7731968;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999966:3,3:3-3,3-3:18,6,0,2:3,18:2,2:143.569:326.675,113.385:0.0,0.0:0.0,1.6661e-05,0.999986
+chr1	7732202	.	GGTTGGGTTGGGTTG	.	.	.	END=7732216;RU=ggttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:3,3:3-3,3-3:17,9,0,0:3,17:NULL:154.298:326.675,113.385:0.0,0.0:0.0,5.22394e-05,0.999949
+chr1	7736177	.	CACACACACACACA	.	.	.	END=7736190;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977661:7,7:6-7,6-7:21,6,0,4:6,2|7,19:5,1|6,3:179.53:326.675,113.385:0.412766,0.412766:7.098e-42,0.0223881,0.977653
+chr1	7741556	.	CTCTCTCTCTCT	.	.	.	END=7741567;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,16,0,0:6,23:NULL:239.065:326.675,113.385:0.0,0.0:0.0,9.61291e-07,1.0
+chr1	7742062	.	GTGGTGGTGGTGGTGGTGGTGGTGGTG	.	.	.	END=7742088;RU=gtg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.919382:9,9:5-9,5-9:26,32,0,4:5,2|8,2|9,22:6,1|8,3:453.025:326.675,113.385:1.77932,1.77932:0.0,0.0807176,0.919377
+chr1	7750668	.	AGGAGGAGGAGGAGGAGG	.	.	.	END=7750685;RU=agg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:31,16,0,5:6,31:3,2|5,3:309.142:326.675,113.385:0.0,0.0:0.0,1.43422e-09,1.0
+chr1	7751603	.	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=7751648;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.902676:23,23:23-24,23-24:8,19,0,25:23,8:5,1|7,2|8,2|9,1|10,2|11,2|12,2|13,1|14,1|16,1|17,1|18,2|19,1|20,2|21,3|22,1:408.968:326.675,113.385:0.398507,0.398507:7.15271e-09,0.0285055,0.971546
+chr1	7753197	.	CATACATACATACATACATACATACATACATACATA	.	.	.	END=7753232;RU=cata;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:19,13,0,15:9,19:3,1|4,3|5,5|6,2|7,1|8,3:306.119:326.675,113.385:0.0,0.0:3.61896e-38,5.86017e-06,0.999995
+chr1	7754174	.	TTGTCCCTTGTCCCTTGTCCC	.	.	.	END=7754194;RU=ttgtccc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,2:3,21:2,2:165.233:326.675,113.385:0.0,0.0:0.0,1.73527e-06,1.0
+chr1	7756374	.	GTGGGTGGGTGG	.	.	.	END=7756385;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,35,0,2:3,21:2,2:419.101:326.675,113.385:0.0,0.0:0.0,2.44914e-06,1.0
+chr1	7757086	.	TAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTA	.	.	.	END=7757130;RU=tagta;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:9,9:6-9,6-9:19,12,0,6:9,19:2,2|3,1|6,1|7,1|8,1:237.37:326.675,113.385:0.810189,0.810189:3e-45,1.63925e-05,0.999986
+chr1	7769821	.	TAAATAAATAAA	.	.	.	END=7769832;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:151.86:326.675,113.385:0.0,0.0:0.0,2.38585e-06,1.0
+chr1	7771289	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7771316;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997637:7,7:7-7,7-7:12,7,0,2:7,12:2,1|6,1:126.413:326.675,113.385:0.0,0.0:1.45808e-39,0.0012583,0.998747
+chr1	7771869	.	TCTTTCTTTCTTTCTTTCTT	.	.	.	END=7771888;RU=tctt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999415:5,5:5-5,5-5:14,6,0,3:5,14:2,1|3,1|4,1:137.823:326.675,113.385:0.0,0.0:4.70182e-40,0.000351915,0.999651
+chr1	7774572	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	.	END=7774631;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.909649:15,15:14-15,14-15:6,12,0,9:15,6:4,2|6,1|8,1|12,1|13,1|14,3:205.97:326.675,113.385:0.469019,0.469019:1.82433e-14,0.0521929,0.947889
+chr1	7774898	.	GAGAAGAGAAGAGAAGAGAAGAGAAGAGAA	.	.	.	END=7774927;RU=gagaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.404266:6,6:3-6,3-6:3,18,0,3:6,3:3,1|5,2:195.218:326.675,113.385:1.06683,1.06683:4.95948e-08,0.451993,0.54812
+chr1	7778042	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7778123;RU=ga;PERIOD=2;REF=41.0;EXPTHRESH=41	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.0276154:20,52:14-52,31-53:0,16,0,16:NULL:4,1|7,1|10,1|12,3|15,1|18,2|20,1|28,2|39,1|45,2|52,1:284.165:326.675,113.385:12.7726,4.55678:9.26909e-22,0.769413,0.230618
+chr1	7779108	.	ACACACACACACACACACACACACACAC	.	.	.	END=7779135;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993219:14,14:14-15,14-15:11,5,0,5:14,11:6,2|8,1|11,1|13,1:133.13:326.675,113.385:0.35561,0.35561:3.71014e-16,0.00236198,0.997647
+chr1	7781851	.	AACAAAACAAAACAA	.	.	.	END=7781865;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,13,0,0:3,25:NULL:214.334:326.675,113.385:0.0,0.0:0.0,2.10585e-07,1.0
+chr1	7788005	.	ACCCACCCACCC	.	.	.	END=7788016;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999849:3,3:3-3,3-3:16,11,0,0:3,16:NULL:167.991:326.675,113.385:0.0,0.0:0.0,0.000115193,0.999887
+chr1	7795035	.	ACCCACCCACCC	.	.	.	END=7795046;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998387:3,3:3-3,3-3:13,26,0,0:3,13:NULL:287.107:326.675,113.385:0.0,0.0:2.00258e-38,0.00140911,0.998595
+chr1	7798081	.	TATTTTATTTTATTT	.	.	.	END=7798095;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999956:3,3:3-3,3-3:17,10,0,0:3,17:NULL:157.95:326.675,113.385:0.0,0.0:0.0,3.8157e-05,0.999964
+chr1	7799463	.	ATGATGATGATG	.	.	.	END=7799474;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,8,0,0:4,30:NULL:188.498:326.675,113.385:0.0,0.0:0.0,6.34163e-09,1.0
+chr1	7801805	.	GTGGGTGGGTGG	.	.	.	END=7801816;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:3,3:3-3,3-3:19,16,0,2:3,19:2,2:233.35:326.675,113.385:0.0,0.0:0.0,1.24675e-05,0.999987
+chr1	7803754	.	ACCCACCCACCC	.	.	.	END=7803765;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.96189:3,3:3-3,3-3:8,26,0,0:3,8:NULL:262.362:326.675,113.385:0.0,0.0:5.20764e-25,0.0283073,0.971747
+chr1	7815175	.	TTGTTGTTGTTG	.	.	.	END=7815186;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99998:4,4:4-5,4-5:18,6,0,2:4,18:3,2:140.519:326.675,113.385:0.284901,0.284901:2.1276e-41,1.56478e-05,0.999986
+chr1	7815188	.	TAGTAGTAGTAGTAGTAGTAG	.	.	.	END=7815208;RU=tag;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999849:7,7:7-7,7-7:16,6,0,3:7,16:4,1|6,2:141.732:326.675,113.385:0.0,0.0:2.43164e-35,5.96846e-05,0.999941
+chr1	7817458	.	TTAATTAATTAA	.	.	.	END=7817469;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929308:3,3:3-3,3-3:7,7,0,0:3,7:NULL:89.6001:326.675,113.385:0.0,0.0:1.61186e-23,0.0389226,0.961144
+chr1	7819272	.	ACACACACACACACACACACACAC	.	.	.	END=7819295;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987278:12,12:11-12,11-12:14,11,0,4:11,2|12,12:8,2|9,1|10,1:196.047:326.675,113.385:0.236383,0.236383:1.05692e-17,0.0116967,0.98833
+chr1	7819739	.	ACCTGGGACGAGAAAACCTGGGACGAGAAAACCTGGGACGAGAAA	.	.	.	END=7819783;RU=acctgggacgagaaa;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993527:3,3:3-3,3-3:11,5,0,0:3,11:NULL:95.4833:326.675,113.385:0.0,0.0:5.11705e-14,0.0047793,0.995235
+chr1	7820296	.	AAAAGAAAAGAAAAG	.	.	.	END=7820310;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.7:326.675,113.385:0.0,0.0:0.0,1.19035e-05,0.999987
+chr1	7821542	.	TTTGTTTGTTTG	.	.	.	END=7821553;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,12,0,0:3,21:NULL:185.675:326.675,113.385:0.0,0.0:0.0,4.07183e-06,0.999995
+chr1	7823455	.	TTTATTTATTTA	.	.	.	END=7823466;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999854:3,3:3-3,3-3:16,7,0,0:3,16:NULL:122.28:326.675,113.385:0.0,0.0:0.0,7.10557e-05,0.999932
+chr1	7838440	.	CTGCTGCTGCTG	.	.	.	END=7838451;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:224.091:326.675,113.385:0.0,0.0:0.0,8.09682e-06,0.999994
+chr1	7840652	.	ACCCACCCACCC	.	.	.	END=7840663;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990279:3,3:3-3,3-3:10,13,0,0:3,10:NULL:152.789:326.675,113.385:0.0,0.0:1.10363e-26,0.00576428,0.994249
+chr1	7849736	.	GGGTGGGTGGGT	.	.	.	END=7849747;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993975:3,3:3-3,3-3:10,15,0,2:3,10:2,2:188.748:326.675,113.385:0.0,0.0:1.60427e-28,0.00273042,0.997276
+chr1	7851717	.	ATTTTTTTATTTTTTTATTTTTTT	.	.	.	END=7851740;RU=attttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.943631:3,3:3-3,3-3:7,6,0,2:3,7:2,2:99.6613:326.675,113.385:0.0,0.0:2.55924e-22,0.0283061,0.971747
+chr1	7857369	.	TTTAATTTAATTTAATTTAATTTAA	.	.	.	END=7857393;RU=tttaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:5,5:5-5,5-5:19,7,0,0:5,19:NULL:141.068:326.675,113.385:0.0,0.0:0.0,1.77228e-05,0.999986
+chr1	7861967	.	TTTGTTTTGTTTTGT	.	.	.	END=7861981;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,5,0,4:3,26:2,4:173.888:326.675,113.385:0.0,0.0:0.0,3.36513e-08,1.0
+chr1	7863803	.	TAAGATTAAGATTAAGAT	.	.	.	END=7863820;RU=taagat;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.778:326.675,113.385:0.0,0.0:0.0,8.92912e-07,1.0
+chr1	7867431	.	AAACAAACAAACAAAC	.	.	.	END=7867446;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,16,0,3:4,25:2,2|3,1:271.543:326.675,113.385:0.0,0.0:0.0,1.07199e-07,1.0
+chr1	7871205	.	ATTTATTTATTTATTTATTT	.	.	.	END=7871224;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999962:5,5:5-5,5-5:17,13,0,7:5,17:3,4|4,3:240.395:326.675,113.385:0.0,0.0:0.0,3.07993e-05,0.999971
+chr1	7879267	.	AAGAAAGAAAGA	.	.	.	END=7879278;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,7,0,3:3,26:2,3:185.156:326.675,113.385:0.0,0.0:0.0,3.62187e-08,1.0
+chr1	7881454	.	GACAGACAGACA	.	.	.	END=7881465;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,18,0,4:3,29:2,4:308.153:326.675,113.385:0.0,0.0:0.0,5.51923e-09,1.0
+chr1	7883786	.	ATTTATTTATTTATTTATTTATTT	.	.	.	END=7883809;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999929:6,6:6-6,6-6:17,10,0,4:6,17:3,1|4,1|5,1|6,1:191.156:326.675,113.385:0.0,0.0:0.0,2.64831e-05,0.999978
+chr1	7887170	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7887201;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988754:8,8:6-8,6-8:26,13,0,4:6,2|8,24:4,1|6,2|7,1:278.17:326.675,113.385:0.904844,0.904844:0.0,0.0112725,0.988754
+chr1	7888946	.	GACAGACAGACA	.	.	.	END=7888957;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:210.054:326.675,113.385:0.0,0.0:0.0,1.55212e-08,1.0
+chr1	7891093	.	ATATATATATATATATATATATATATATATATATATAT	.	.	.	END=7891130;RU=at;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.647398:19,19:18-22,18-22:6,4,0,0:19,6:NULL:62.7653:326.675,113.385:1.28538,1.28538:2.63552e-05,0.140772,0.859295
+chr1	7891383	.	TGTTTTGTTTTGTTT	.	.	.	END=7891397;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999915:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.421:326.675,113.385:0.0,0.0:0.0,5.49623e-05,0.999948
+chr1	7892968	.	AATAATAATAAT	.	.	.	END=7892979;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:180.598:326.675,113.385:0.0,0.0:0.0,7.9396e-07,1.0
+chr1	7895098	.	TTTTGTTTTGTTTTG	.	.	.	END=7895112;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:242.509:326.675,113.385:0.0,0.0:0.0,1.08537e-07,1.0
+chr1	7898220	.	ATAGATAGATAG	.	.	.	END=7898231;RU=atag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:272.183:326.675,113.385:0.0,0.0:0.0,1.8962e-06,1.0
+chr1	7902277	.	CTCTCTTGCTCTCTTGCTCTCTTGCTCTCTTG	.	.	.	END=7902308;RU=ctctcttg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999988:4,4:4-4,4-4:19,18,0,3:4,19:3,3:267.977:326.675,113.385:0.0,0.0:0.0,2.09661e-05,0.999979
+chr1	7902333	.	CTCTCCTCTCCTCTC	.	.	.	END=7902347;RU=ctctc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,13,0,2:3,22:2,2:226.959:326.675,113.385:0.0,0.0:0.0,1.32696e-06,1.0
+chr1	7902723	.	CACCCCACCCCACCCCACCC	.	.	.	END=7902742;RU=caccc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999912:4,4:4-4,4-4:16,14,0,3:4,16:3,3:212.011:326.675,113.385:0.0,0.0:0.0,5.59225e-05,0.999947
+chr1	7904296	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7904335;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.704436:20,21:19-20,18-21:9,7,0,16:19,2|20,5|21,2:5,3|6,2|12,2|13,1|15,1|16,2|17,2|18,1|19,2:238.51:326.675,113.385:0.469854,0.98424:1.38315e-07,0.101529,0.898575
+chr1	7906023	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7906042;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,6,0,7:5,24:2,1|3,4|4,2:198.611:326.675,113.385:0.0,0.0:0.0,1.73549e-07,1.0
+chr1	7909399	.	TCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7909410;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.290253:3,14:3-3,3-15:5,9,0,2:3,5:13,1|14,1:119.213:326.675,113.385:0.0,4.03871:2.8659e-27,6.00102e-14,1.0
+chr1	7915045	.	GTGTGTGTGTGT	.	.	.	END=7915056;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.965444:6,6:6-8,6-8:9,18,0,0:6,9:NULL:198.063:326.675,113.385:0.856192,0.856192:9.95762e-17,0.0222382,0.977805
+chr1	7926986	.	CAAAACAAAACAAAACAAAACAAAACAAAA	.	.	.	END=7927015;RU=caaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:27,24,0,5:6,27:2,1|3,2|4,1|5,1:368.58:326.675,113.385:0.0,0.0:0.0,5.05438e-08,1.0
+chr1	7937066	.	ACACACACACACAC	.	.	.	END=7937079;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999137:7,7:7-8,7-8:14,5,0,2:7,14:5,2:116.11:326.675,113.385:0.253975,0.253975:5.97146e-25,0.000346904,0.999658
+chr1	7937514	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7937567;RU=gt;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.848815:27,27:25-27,25-27:7,9,0,12:27,7:4,1|11,1|12,1|13,1|16,2|17,1|19,1|20,1|21,1|23,2:208.109:326.675,113.385:0.669764,0.669764:4.12169e-09,0.0626275,0.937463
+chr1	7939725	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=7939776;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.598119:26,26:23-26,23-26:4,21,0,20:26,4:5,1|6,3|7,1|8,1|9,3|11,1|15,1|16,1|18,1|19,1|20,2|21,1|25,2|26,1:369.806:326.675,113.385:1.00893,1.00893:6.09719e-14,0.206923,0.793123
+chr1	7939777	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7939814;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.342097:19,26:19-19,18-27:15,13,0,3:18,2|19,13:18,1|21,1|26,1:228.743:326.675,113.385:0.0,3.06477:5.61739e-33,5.98841e-12,1.0
+chr1	7967867	.	AAACAAACAAACAAACAAAC	.	.	.	END=7967886;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997946:5,5:5-5,5-5:12,11,0,5:5,12:2,1|3,1|4,3:180.598:326.675,113.385:0.0,0.0:1.398e-42,0.000923213,0.999081
+chr1	7968753	.	AAGCAAGCAAGC	.	.	.	END=7968764;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.96209:3,3:3-3,3-3:8,7,0,0:3,8:NULL:94.2688:326.675,113.385:0.0,0.0:3.25334e-27,0.0200543,0.979987
+chr1	7969719	.	AAATAAATAAATAAATAAAT	.	.	.	END=7969738;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977978:5,5:5-5,5-5:9,4,0,0:5,9:NULL:72.6275:326.675,113.385:0.0,0.0:3.47392e-30,0.0125675,0.987461
+chr1	7986821	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=7986852;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999515:8,8:8-8,8-8:14,14,0,15:8,14:3,2|4,1|5,5|6,4|7,3:291.605:326.675,113.385:0.0,0.0:2.75757e-38,0.000194398,0.99981
+chr1	8003962	.	TTGTTTGTTTGT	.	.	.	END=8003973;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.883694:3,3:3-3,3-3:6,10,0,0:3,6:NULL:118.129:326.675,113.385:0.0,0.0:9.06063e-21,0.0639908,0.936099
+chr1	8004898	.	AAGGAAGGAAGG	.	.	.	END=8004909;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:213.394:326.675,113.385:0.0,0.0:0.0,8.8998e-06,0.999994
+chr1	8005269	.	TTTATTTATTTA	.	.	.	END=8005280;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:20,16,0,0:3,20:NULL:233.918:326.675,113.385:0.0,0.0:0.0,1.32684e-05,0.999987
+chr1	8005894	.	GTGTGTGTGTGTGT	.	.	.	END=8005907;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99969:7,7:7-8,7-8:15,12,0,4:7,15:4,1|6,3:200.321:326.675,113.385:0.270063,0.270063:6.405e-28,0.000103737,0.999896
+chr1	8015093	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	END=8015152;RU=ggag;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0494967:12,12:8-12,8-12:0,3,0,6:NULL:3,1|6,1|8,1|11,1|12,2:70.3561:326.675,113.385:1.30046,1.30046:0.676946,0.294354,0.028742
+chr1	8015152	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=8015183;RU=ggaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999814:8,8:8-10,8-10:16,2,0,3:8,16:3,1|7,2:105.387:326.675,113.385:0.797014,0.797014:1.31413e-38,5.16073e-05,0.999949
+chr1	8015590	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8015635;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.654856:23,24:22-23,21-24:11,7,0,5:22,3|23,6|24,2:4,1|5,2|6,1|12,1:164.248:326.675,113.385:0.429525,0.920845:3.63768e-08,0.076716,0.923377
+chr1	8018726	.	CTGCTGCTGCTG	.	.	.	END=8018737;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,21,0,0:4,22:NULL:268.061:326.675,113.385:0.0,0.0:0.0,2.23241e-06,1.0
+chr1	8019993	.	ACACACACACACACACACACACACACAC	.	.	.	END=8020020;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999506:14,14:14-15,14-15:26,15,0,6:13,3|14,21|15,2:4,1|5,1|7,1|9,1|12,2:312.639:326.675,113.385:0.195027,0.195027:3.34035e-27,0.000366867,0.999636
+chr1	8023350	.	TGATGATGATGA	.	.	.	END=8023361;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,13,0,0:4,19:NULL:194.258:326.675,113.385:0.0,0.0:0.0,1.44639e-05,0.999986
+chr1	8028124	.	ACACACACACACACAC	.	.	.	END=8028139;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:28,12,0,7:8,28:5,2|6,1|7,4:281.72:326.675,113.385:0.0,0.0:0.0,1.34757e-08,1.0
+chr1	8035149	.	GTGTGTGTGTGTGT	.	.	.	END=8035162;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:30,17,0,2:7,30:6,2:300.087:326.675,113.385:0.0,0.0:0.0,8.81438e-09,1.0
+chr1	8039355	.	GTGGGTGGGTGG	.	.	.	END=8039366;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:51,11,0,4:3,51:2,4:327.464:326.675,113.385:0.0,0.0:0.0,1.1277e-15,1.0
+chr1	8039460	.	ATACATACATACATACATACATAC	.	.	.	END=8039483;RU=atac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:28,15,0,8:6,28:2,2|3,2|4,2|5,2:306.503:326.675,113.385:0.0,0.0:0.0,1.9037e-08,1.0
+chr1	8047704	.	TGGTTGGTTGGT	.	.	.	END=8047715;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,12,0,0:3,32:NULL:233.934:326.675,113.385:0.0,0.0:0.0,1.47459e-09,1.0
+chr1	8053368	.	AAATAAATAAAT	.	.	.	END=8053379;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995495:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.957:326.675,113.385:0.0,0.0:2.08069e-37,0.0027254,0.997283
+chr1	8057815	.	TTTATTTATTTA	.	.	.	END=8057826;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:210.317:326.675,113.385:0.0,0.0:0.0,5.71642e-06,0.999995
+chr1	8058525	.	CTACTACTACTA	.	.	.	END=8058536;RU=cta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:202.493:326.675,113.385:0.0,0.0:0.0,6.14543e-06,0.999995
+chr1	8058938	.	TTGGTTGGTTGG	.	.	.	END=8058949;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:3,3:3-3,3-3:19,26,0,0:3,19:NULL:314.665:326.675,113.385:0.0,0.0:0.0,2.32134e-05,0.999979
+chr1	8061760	.	TTTATTTATTTA	.	.	.	END=8061771;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:209.233:326.675,113.385:0.0,0.0:0.0,1.0808e-07,1.0
+chr1	8063311	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8063358;RU=ct;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.942422:24,25:23-24,23-26:13,11,0,6:23,3|24,7|25,3:5,2|10,1|18,2|24,1:231.017:326.675,113.385:0.253975,0.85905:5.17546e-17,0.0127168,0.987312
+chr1	8063359	.	CACACACACACACACACACACACACACA	.	.	.	END=8063386;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998811:14,14:13-14,13-14:13,12,0,7:14,13:5,1|7,1|10,2|12,2|13,1:226.441:326.675,113.385:0.253975,0.253975:1.41554e-22,0.000607714,0.999394
+chr1	8066722	.	CATGCATGCATG	.	.	.	END=8066733;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999638:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.182:326.675,113.385:0.0,0.0:0.0,0.000209397,0.999795
+chr1	8068975	.	ATTCATTCATTC	.	.	.	END=8068986;RU=attc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:146.035:326.675,113.385:0.0,0.0:0.0,2.6369e-07,1.0
+chr1	8075123	.	CTCCCTCCCTCC	.	.	.	END=8075134;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:248.856:326.675,113.385:0.0,0.0:0.0,1.1653e-07,1.0
+chr1	8083970	.	GTGTGTGTGTGT	.	.	.	END=8083981;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:33,20,0,0:6,33:NULL:306.839:326.675,113.385:0.0,0.0:0.0,1.10416e-09,1.0
+chr1	8091175	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8091222;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.641589:24,24:23-24,23-24:13,12,0,7:23,3|24,10:11,1|16,1|17,1|19,3|23,1:225.676:326.675,113.385:0.491073,0.491073:6.05201e-11,0.357067,0.642976
+chr1	8093608	.	AGAAAGAAAGAA	.	.	.	END=8093619;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:220.726:326.675,113.385:0.0,0.0:0.0,6.07462e-08,1.0
+chr1	8095889	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8095942;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.276807:27,36:27-27,9-36:14,20,0,33:26,3|27,9|28,2:5,2|6,1|8,1|9,1|11,3|12,2|13,1|14,1|15,2|16,1|17,1|18,1|19,1|20,1|21,4|22,1|24,1|25,2|26,2|27,1|29,1|30,1|34,1:534.626:326.675,113.385:0.0990099,7.57372:7.14644e-35,2.33556e-10,1.0
+chr1	8098070	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=8098089;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999931:4,4:4-4,4-4:17,12,0,2:4,17:3,2:191.621:326.675,113.385:0.0,0.0:0.0,3.87537e-05,0.999963
+chr1	8099157	.	ATATATATATATATATATATATATATATAT	.	.	.	END=8099186;RU=at;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.884329:15,15:13-18,13-18:8,2,0,0:15,8:NULL:53.528:326.675,113.385:1.0936,1.0936:4.83461e-07,0.0599293,0.940159
+chr1	8099251	.	TTTGTTTGTTTGTTTG	.	.	.	END=8099266;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999251:4,4:4-4,4-4:14,4,0,0:4,14:NULL:88.6924:326.675,113.385:0.0,0.0:1e-45,0.000424862,0.999576
+chr1	8104863	.	AGGAAGGAAGGA	.	.	.	END=8104874;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,27,0,2:3,23:2,2:352.532:326.675,113.385:0.0,0.0:0.0,5.92066e-07,1.0
+chr1	8108241	.	TCTTCTTCTTCT	.	.	.	END=8108252;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999976:4,4:4-4,4-4:19,14,0,0:4,19:NULL:206.848:326.675,113.385:0.0,0.0:0.0,3.39215e-05,0.99997
+chr1	8108409	.	TCTTTCTTTCTT	.	.	.	END=8108420;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:237.13:326.675,113.385:0.0,0.0:0.0,2.04546e-10,1.0
+chr1	8109627	.	ATATATATATATAT	.	.	.	END=8109640;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:20,6,0,2:7,20:4,2:150.079:326.675,113.385:0.0,0.0:7.87813e-26,1.11203e-05,0.999993
+chr1	8111389	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8111422;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.771566:13,17:13-17,17-17:15,13,0,15:13,2|16,3|17,10:6,2|8,2|9,2|10,2|11,2|12,3|16,2:324.918:326.675,113.385:1.82038,0.0:4.76351e-10,0.91326,0.0868381
+chr1	8113654	.	TATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=8113685;RU=tatt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999572:8,8:7-8,7-8:14,18,0,8:8,14:3,1|4,1|5,2|7,3|8,1:281.979:326.675,113.385:0.345543,0.345543:0.0,0.000167456,0.999834
+chr1	8114127	.	TTGTTTGTTTGT	.	.	.	END=8114138;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.804:326.675,113.385:0.0,0.0:0.0,5.3239e-05,0.999948
+chr1	8114704	.	TTAATTAATTAATTAA	.	.	.	END=8114719;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999136:4,4:4-4,4-4:14,12,0,0:4,14:NULL:164.933:326.675,113.385:0.0,0.0:1.562e-42,0.000666524,0.999339
+chr1	8115132	.	AAATAAATAAAT	.	.	.	END=8115143;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.987:326.675,113.385:0.0,0.0:0.0,2.60132e-07,1.0
+chr1	8115975	.	AGAAAGAAAGAA	.	.	.	END=8115986;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,12,0,0:3,22:NULL:198.796:326.675,113.385:0.0,0.0:0.0,1.41773e-06,1.0
+chr1	8116438	.	GTTGTTGTTGTTGTT	.	.	.	END=8116452;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986297:5,5:5-5,5-5:10,13,0,0:5,10:NULL:158.594:326.675,113.385:0.0,0.0:1.25291e-30,0.00974018,0.990283
+chr1	8119064	.	TTTGTTTGTTTG	.	.	.	END=8119075;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,10,0,0:3,29:NULL:209.031:326.675,113.385:0.0,0.0:0.0,9.50918e-09,1.0
+chr1	8122477	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=8122534;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.327823:29,29:27-30,27-30:3,22,0,20:29,3:4,1|5,3|7,2|8,1|10,1|13,1|14,1|15,2|16,1|18,1|19,1|20,3|25,1|27,1:374.998:326.675,113.385:1.16277,1.16277:9.19554e-05,0.424578,0.575422
+chr1	8122771	.	ATCTATCTATCT	.	.	.	END=8122782;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:225.757:326.675,113.385:0.0,0.0:0.0,4.68736e-07,1.0
+chr1	8130079	.	ATCTATCTATCT	.	.	.	END=8130090;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,20,0,2:3,30:2,2:316.916:326.675,113.385:0.0,0.0:0.0,2.97695e-09,1.0
+chr1	8130171	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8130210;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.891619:20,20:18-20,18-20:10,15,0,7:19,2|20,8:6,1|8,1|11,3|12,1|19,1:251.968:326.675,113.385:0.62211,0.62211:3.15234e-10,0.0847739,0.915325
+chr1	8132817	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=8132848;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.958789:16,16:15-16,15-16:14,11,0,3:15,3|16,11:11,1|12,1|13,1:192.157:326.675,113.385:0.21692,0.21692:1.2706e-12,0.0390885,0.960981
+chr1	8135933	.	TATTTTATTTTATTT	.	.	.	END=8135947;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.95758:3,3:3-3,3-3:8,9,0,0:3,8:NULL:112.795:326.675,113.385:0.0,0.0:1.3255e-26,0.025304,0.974748
+chr1	8136804	.	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	.	END=8136863;RU=ttgtt;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999732:12,12:12-12,12-12:15,18,0,14:12,15:3,1|4,4|7,2|8,3|9,1|11,3:335.976:326.675,113.385:0.0,0.0:3e-45,0.000192081,0.999811
+chr1	8138672	.	AGCAGCAGCAGC	.	.	.	END=8138683;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:36,8,0,0:4,36:NULL:220.562:326.675,113.385:0.0,0.0:0.0,1.65479e-10,1.0
+chr1	8149815	.	TATATATATATATATATATATATATATATATATATATATATATATA	.	.	.	END=8149860;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.200773:23,23:22-24,22-24:2,4,0,2:23,2:6,1|12,1:61.958:326.675,113.385:0.828495,0.828495:0.00693742,0.433048,0.560128
+chr1	8152098	.	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=8152145;RU=ttta;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98957:12,12:12-12,12-12:10,8,0,9:12,10:4,1|5,1|6,1|7,1|8,2|10,1|11,2:181.088:326.675,113.385:0.0,0.0:2.07029e-22,0.00534625,0.994669
+chr1	8163528	.	GAGAGGAGAGGAGAG	.	.	.	END=8163542;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982968:3,3:3-3,3-3:9,10,0,0:3,9:NULL:130.81:326.675,113.385:0.0,0.0:3.91995e-27,0.0109445,0.989081
+chr1	8167006	.	AATTTAATTTAATTT	.	.	.	END=8167020;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:170.283:326.675,113.385:0.0,0.0:0.0,9.03986e-08,1.0
+chr1	8167756	.	ATATATATATATAT	ATATATATATATATAT	.	.	END=8167769;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.748426:7,8:7-7,7-8:9,5,0,0:7,7|8,2:NULL:86.5737:326.675,113.385:0.0,0.498798:2.74331e-13,0.00406086,0.995952
+chr1	8169940	.	AAATAAATAAATAAATAAAT	.	.	.	END=8169959;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,10,0,4:5,25:3,2|4,2:223.984:326.675,113.385:0.0,0.0:0.0,1.14854e-07,1.0
+chr1	8172972	.	CTTTCTTTCTTT	.	.	.	END=8172983;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.497:326.675,113.385:0.0,0.0:0.0,2.2279e-05,0.999979
+chr1	8173983	.	ATAAATAAATAA	.	.	.	END=8173994;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.598:326.675,113.385:0.0,0.0:0.0,5.37023e-06,0.999995
+chr1	8174320	.	AGGAAGGAAGGA	.	.	.	END=8174331;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:2-3,2-3:26,9,0,2:3,26:2,2:199.81:326.675,113.385:0.253975,0.253975:0.0,4.32072e-08,1.0
+chr1	8177036	.	AGGGAGGGAGGG	.	.	.	END=8177047;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997989:3,3:3-3,3-3:12,10,0,0:3,12:NULL:134.192:326.675,113.385:0.0,0.0:6.5965e-41,0.000969514,0.999035
+chr1	8179090	.	ACACACACACAC	.	.	.	END=8179101;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-14,6-14:29,8,0,2:6,29:5,1|6,1:207.577:326.675,113.385:3.72193,3.72193:0.0,5.69252e-09,1.0
+chr1	8183007	.	AAAGAAAGAAAG	.	.	.	END=8183018;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99913:3,3:3-3,3-3:13,6,0,0:3,13:NULL:108.628:326.675,113.385:0.0,0.0:3.9e-44,0.000489509,0.999514
+chr1	8186005	.	GAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=8186028;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.962329:12,12:12-14,12-14:17,21,0,5:11,2|12,13|13,2:5,1|6,1|9,3:321.879:326.675,113.385:0.681228,0.681228:4.07662e-16,0.00669391,0.993323
+chr1	8198691	.	AAACAAACAAAC	.	.	.	END=8198702;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,21,0,2:3,38:2,2:357.131:326.675,113.385:0.0,0.0:0.0,1.73423e-11,1.0
+chr1	8204150	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=8204173;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:6,6:6-6,6-6:16,10,0,5:6,16:3,1|4,4:192.651:326.675,113.385:0.0,0.0:0.0,0.000111831,0.999888
+chr1	8206337	.	CCACCACCACCA	.	.	.	END=8206348;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,10,0,0:4,22:NULL:178.452:326.675,113.385:0.0,0.0:0.0,1.7583e-06,1.0
+chr1	8223406	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8223453;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985847:24,24:24-25,24-25:11,11,0,12:24,11:4,1|5,1|6,4|11,1|14,1|17,1|18,1|21,1|23,1:244.728:326.675,113.385:0.195027,0.195027:3.05043e-12,0.00493001,0.995084
+chr1	8225347	.	TCCCTCCCTCCC	.	.	.	END=8225358;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:233.175:326.675,113.385:0.0,0.0:0.0,4.43822e-09,1.0
+chr1	8227632	.	TCCTTCCTTCCT	.	.	.	END=8227643;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,11,0,2:3,30:2,2:240.348:326.675,113.385:0.0,0.0:0.0,3.05243e-09,1.0
+chr1	8229590	.	TAATAATAATAA	.	.	.	END=8229601;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:165.956:326.675,113.385:0.0,0.0:0.0,1.92415e-06,1.0
+chr1	8234581	.	CTCTCTCTCTCTCT	.	.	.	END=8234594;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999659:7,7:6-7,6-7:24,11,0,3:6,2|7,22:5,2|6,1:229.004:326.675,113.385:0.294378,0.294378:1e-45,0.000343236,0.999659
+chr1	8242991	.	TTGTTGTTGTTGTTG	.	.	.	END=8243005;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999806:5,5:5-5,5-5:15,13,0,3:5,15:4,3:199.113:326.675,113.385:0.0,0.0:1.78e-43,0.000116566,0.999887
+chr1	8246899	.	AAGCAAGCAAGCAAGC	.	.	.	END=8246914;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,15,0,3:4,30:2,1|3,2:274.711:326.675,113.385:0.0,0.0:0.0,5.01533e-09,1.0
+chr1	8246965	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	.	END=8247014;RU=aagaa;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.898434:10,10:7-10,7-10:6,16,0,17:10,6:3,1|4,2|5,3|6,2|7,2|8,5|9,2:289.122:326.675,113.385:1.44541,1.44541:3.21687e-14,0.052063,0.948018
+chr1	8266031	.	GTGGTGGTGGTG	.	.	.	END=8266042;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997056:4,4:4-4,4-4:12,11,0,0:4,12:NULL:151.09:326.675,113.385:0.0,0.0:2.38039e-40,0.00193777,0.99807
+chr1	8266249	.	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	.	.	.	END=8266303;RU=caaaa;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985697:11,11:11-11,11-11:11,13,0,8:11,11:3,1|4,2|5,2|6,2|8,1:230.731:326.675,113.385:0.0,0.0:4.34179e-34,0.0130186,0.987009
+chr1	8266615	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8266654;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.629295:20,21:19-20,19-21:16,11,0,10:19,4|20,9|21,3:4,1|7,2|11,1|13,1|14,1|15,1|16,1|19,2:266.552:326.675,113.385:0.253975,0.783868:6.61717e-12,0.131809,0.868288
+chr1	8277000	.	ACCCACCCACCC	.	.	.	END=8277011;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.932852:3,3:3-3,3-3:7,16,0,0:3,7:NULL:175.271:326.675,113.385:0.0,0.0:2.30008e-19,0.0474448,0.952631
+chr1	8279683	.	CTCTCTCTCTCT	.	.	.	END=8279694;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:31,15,0,0:6,31:NULL:262.196:326.675,113.385:0.0,0.0:0.0,5.96934e-09,1.0
+chr1	8279713	.	TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC	.	.	.	END=8279762;RU=tcctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.892845:10,10:3-10,3-10:8,20,0,18:10,8:2,4|3,3|4,3|5,1|6,4|7,2|8,1:347.23:326.675,113.385:2.778,2.778:1.45748e-16,0.0949286,0.905171
+chr1	8280732	.	CACACACACACACACACACACA	.	.	.	END=8280753;RU=ca;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929785:11,11:11-12,11-12:21,6,0,4:11,18|12,3:5,2|6,1|10,1:187.392:326.675,113.385:0.398507,0.398507:3.70661e-29,5.56129e-06,0.999995
+chr1	8282353	.	GGGTGGGTGGGT	.	.	.	END=8282364;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987199:3,3:3-3,3-3:10,17,0,0:3,10:NULL:188.791:326.675,113.385:0.0,0.0:2.35018e-28,0.00808223,0.991936
+chr1	8290480	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=8290543;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997484:16,16:16-16,16-16:12,15,0,18:16,12:3,2|5,1|6,2|8,3|9,2|10,3|13,1|15,3|16,1:324.595:326.675,113.385:0.0,0.0:1.61841e-34,0.000532592,0.999469
+chr1	8290943	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	.	END=8291032;RU=tct;PERIOD=3;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.280789:30,30:26-30,26-30:3,9,0,17:30,3:5,2|6,1|8,1|9,3|12,1|14,2|16,1|19,1|20,1|21,1|23,2|28,1:227.676:326.675,113.385:1.32066,1.32066:5.78395e-06,0.449715,0.550385
+chr1	8293500	.	TGGTGGTGGTGG	.	.	.	END=8293511;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:4,4:4-4,4-4:19,13,0,0:4,19:NULL:192.347:326.675,113.385:0.0,0.0:0.0,2.57329e-05,0.999978
+chr1	8295438	.	CTGCCTGCCTGC	.	.	.	END=8295449;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997312:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.932:326.675,113.385:0.0,0.0:2.08556e-37,0.00150062,0.998504
+chr1	8296427	.	GGTAGGTAGGTA	.	.	.	END=8296438;RU=ggta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.415:326.675,113.385:0.0,0.0:0.0,1.54454e-07,1.0
+chr1	8303139	.	ACCACCACCACCACCACC	.	.	.	END=8303156;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999411:6,6:4-6,4-6:14,7,0,4:6,14:4,3|5,1:145.61:326.675,113.385:0.851255,0.851255:3.77311e-40,0.000251334,0.99975
+chr1	8303362	.	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	.	.	.	END=8303409;RU=ataa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.571462:12,12:11-14,11-14:4,9,0,8:12,4:3,1|6,1|7,1|8,3|9,1|11,1:157.02:326.675,113.385:1.11535,1.11535:6.3577e-09,0.241148,0.758872
+chr1	8303901	.	AACAACAACAACAAC	.	.	.	END=8303915;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997124:5,5:5-5,5-5:12,10,0,2:5,12:4,2:160.303:326.675,113.385:0.0,0.0:7.74398e-31,0.00124512,0.998761
+chr1	8314805	.	AATAAAATAAAATAA	.	.	.	END=8314819;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:138.841:326.675,113.385:0.0,0.0:0.0,1.05149e-05,0.999993
+chr1	8314957	.	CACAACACAACACAA	.	.	.	END=8314971;RU=cacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:3,3:3-3,3-3:18,9,0,2:3,18:2,1|3,1:165.01:326.675,113.385:0.0,0.0:0.0,7.22613e-06,0.999994
+chr1	8316961	.	TATATATATATATA	.	.	.	END=8316974;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999463:7,7:7-8,7-8:15,5,0,0:7,15:NULL:108.023:326.675,113.385:0.195027,0.195027:4.76262e-23,0.000320093,0.999682
+chr1	8321168	.	TTTGTTTGTTTG	.	.	.	END=8321179;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.93009:3,3:3-3,3-3:6,15,0,5:3,6:2,5:193.937:326.675,113.385:0.0,0.0:1.02792e-20,0.0346144,0.965449
+chr1	8322155	.	CAACAACAACAACAA	.	.	.	END=8322169;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,7,0,2:5,24:3,1|4,1:173.71:326.675,113.385:0.0,0.0:0.0,2.6353e-07,1.0
+chr1	8322582	.	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	.	.	.	END=8322666;RU=tctgt;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.889489:17,17:17-17,17-17:6,23,0,19:17,6:2,1|3,1|5,1|6,2|7,3|9,1|10,1|11,1|12,3|13,1|15,1|16,2|17,1:381.173:326.675,113.385:0.278639,0.278639:2.99727e-17,0.0723204,0.927774
+chr1	8325886	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=8325921;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985159:9,9:8-9,8-9:9,13,0,8:9,9:2,1|4,1|6,1|7,4|8,1:214.639:326.675,113.385:0.45695,0.45695:5.96041e-20,0.00861212,0.991405
+chr1	8328000	.	CAACAACAACAA	.	.	.	END=8328011;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,15,0,0:4,20:NULL:214.427:326.675,113.385:0.0,0.0:0.0,7.2502e-06,0.999994
+chr1	8329731	.	ATAAATAAATAA	.	.	.	END=8329742;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,14,0,0:3,30:NULL:246.505:326.675,113.385:0.0,0.0:0.0,5.56693e-09,1.0
+chr1	8330089	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8330126;RU=ag;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.705345:19,19:19-20,19-20:12,12,0,6:19,10|20,2:4,1|8,1|9,1|11,1|13,1|16,1:216.776:326.675,113.385:0.452422,0.452422:1.00315e-13,0.00259924,0.997406
+chr1	8331327	.	TGTCTGTCTGTC	.	.	.	END=8331338;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,4:3,21:2,4:233.26:326.675,113.385:0.0,0.0:0.0,1.12939e-06,1.0
+chr1	8332124	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8332161;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.317539:19,24:19-19,19-25:16,20,0,16:18,2|19,14:4,1|6,2|8,1|9,1|11,2|12,1|14,3|15,1|17,1|18,1|19,1|24,1:396.996:326.675,113.385:0.0,2.71258:4.67477e-25,7.44892e-06,0.999994
+chr1	8333431	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	.	END=8333470;RU=tttgt;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999865:8,8:8-9,8-9:16,15,0,10:8,16:3,2|4,3|6,2|7,3:282.05:326.675,113.385:0.382696,0.382696:0.0,7.31916e-05,0.999926
+chr1	8334958	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=8334981;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.571229:6,6:5-6,5-6:20,6,0,8:5,3|6,17:3,2|4,2|5,4:204.081:326.675,113.385:0.469019,0.469019:1.44932e-37,0.428869,0.571225
+chr1	8338614	.	ATAAATAAATAAATAAATAA	.	.	.	END=8338633;RU=ataa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:2,1|3,2|4,1:178.83:326.675,113.385:0.0,0.0:0.0,2.26863e-06,1.0
+chr1	8338698	.	AATAATAATAAT	.	.	.	END=8338709;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999899:4,4:4-4,4-4:17,7,0,0:4,17:NULL:129.851:326.675,113.385:0.0,0.0:0.0,7.15077e-05,0.999932
+chr1	8339191	.	CTGTGCTGTGCTGTG	.	.	.	END=8339205;RU=ctgtg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.963:326.675,113.385:0.0,0.0:0.0,6.85317e-06,0.999994
+chr1	8339827	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8339862;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980216:18,18:14-19,14-19:10,6,0,8:18,10:6,2|7,1|9,2|12,2|17,1:159.194:326.675,113.385:1.50632,1.50632:4.74857e-16,0.00819059,0.99183
+chr1	8339980	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT	.	.	END=8340019;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.601332:19,20:19-21,20-21:5,5,0,2:19,2|20,3:4,1|11,1:85.3542:326.675,113.385:0.753387,0.40582:0.0111203,0.695401,0.293511
+chr1	8345278	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=8345305;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:6-7,6-7:23,10,0,6:7,23:4,1|5,1|6,4:239.707:326.675,113.385:0.29703,0.29703:0.0,4.11408e-07,1.0
+chr1	8353434	.	TTTGTTTGTTTGTTTG	.	.	.	END=8353449;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999895:4,4:4-4,4-4:17,9,0,0:4,17:NULL:151.271:326.675,113.385:0.0,0.0:9.70261e-38,8.64309e-05,0.999917
+chr1	8354049	.	AAGCAAGCAAGC	.	.	.	END=8354060;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.945666:3,3:3-3,3-3:7,4,0,2:3,7:2,2:78.2415:326.675,113.385:0.0,0.0:2.55084e-23,0.0192365,0.980801
+chr1	8357311	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8357328;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:26,12,0,4:9,26:6,1|7,1|8,2:242.065:326.675,113.385:0.0,0.0:0.0,6.70531e-08,1.0
+chr1	8366194	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=8366227;RU=ct;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.763277:17,17:16-17,16-17:21,12,0,8:16,6|17,15:4,1|9,2|11,1|12,1|13,1|14,1|16,1:277.096:326.675,113.385:0.696878,0.696878:3.64364e-12,0.236711,0.763312
+chr1	8366995	.	ATATATATATATATATATATATATATATATATAT	.	.	.	END=8367028;RU=at;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.729332:17,17:17-17,17-17:6,2,0,0:17,6:NULL:46.4011:326.675,113.385:0.0,0.0:1.36574e-06,0.105537,0.894565
+chr1	8371543	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=8371606;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.685203:16,16:16-16,16-16:5,8,0,8:16,5:5,2|7,1|10,1|11,2|12,1|14,1:155.276:326.675,113.385:0.19802,0.19802:1.05189e-07,0.206014,0.794033
+chr1	8374412	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=8374432;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999219:7,7:7-7,7-7:13,14,0,6:7,13:3,1|4,2|6,3:226.934:326.675,113.385:0.0,0.0:4.64972e-32,0.000408752,0.999592
+chr1	8374431	.	TGATGATGATGATGATGA	.	.	.	END=8374448;RU=tga;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:6,6:6-6,6-6:18,11,0,5:6,18:3,1|4,3|5,1:213.13:326.675,113.385:0.0,0.0:0.0,1.50354e-05,0.999986
+chr1	8378065	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	.	END=8378114;RU=tcttt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.902909:10,10:9-10,9-10:7,8,0,6:10,7:2,1|3,1|5,1|6,1|7,1|8,1:149.552:326.675,113.385:0.607117,0.607117:1.93876e-22,0.0627019,0.937389
+chr1	8383454	.	TAATTAATTAATTAAT	.	.	.	END=8383469;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999182:4,4:4-4,4-4:14,10,0,0:4,14:NULL:152.232:326.675,113.385:0.0,0.0:1.50491e-40,0.000573469,0.999431
+chr1	8384813	.	TGTGTGTGTGTG	.	.	.	END=8384824;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:26,17,0,0:6,26:NULL:264.41:326.675,113.385:0.139319,0.139319:0.0,1.56232e-07,1.0
+chr1	8389556	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	.	END=8389603;RU=tatc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966978:12,12:11-12,11-12:8,19,0,13:12,8:3,3|5,2|8,3|10,2|11,3:308.233:326.675,113.385:0.419363,0.419363:6.27891e-11,0.0183287,0.981709
+chr1	8389896	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	.	END=8389935;RU=atct;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999886:10,10:10-10,10-10:16,22,0,13:10,16:4,3|5,1|6,2|7,2|8,2|9,3:363.177:326.675,113.385:0.0,0.0:4.44127e-38,8.00208e-05,0.999924
+chr1	8389961	.	TTTGTTTGTTTG	.	.	.	END=8389972;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:348.37:326.675,113.385:0.0,0.0:0.0,3.40439e-08,1.0
+chr1	8409196	.	AAAAACAAAAACAAAAAC	.	.	.	END=8409213;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983591:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.7495:326.675,113.385:0.0,0.0:3.68951e-30,0.00828025,0.991741
+chr1	8410948	.	CGCTCGCTCGCT	.	.	.	END=8410959;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,19,0,6:3,39:2,6:366.886:326.675,113.385:0.0,0.0:0.0,6.181e-12,1.0
+chr1	8413506	.	TTATTTATTTAT	.	.	.	END=8413517;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999463:3,3:3-3,3-3:14,8,0,0:3,14:NULL:128.065:326.675,113.385:0.0,0.0:0.0,0.000323489,0.999681
+chr1	8415286	.	AAACAAACAAACAAACAAAC	.	.	.	END=8415305;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:2,1|3,5|4,1:263.434:326.675,113.385:0.0,0.0:0.0,8.23304e-07,1.0
+chr1	8418293	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=8418328;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:24,13,0,6:9,24:3,1|4,1|6,1|7,1|8,2:265.715:326.675,113.385:0.0,0.0:0.0,3.37734e-07,1.0
+chr1	8419081	.	AAATAAATAAAT	.	.	.	END=8419092;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999885:3,3:2-3,2-3:16,13,0,0:3,16:NULL:178.943:326.675,113.385:0.419363,0.419363:0.0,7.18237e-05,0.999932
+chr1	8420846	.	AAATAAATAAAT	.	.	.	END=8420857;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999923:3,3:3-3,3-3:17,11,0,0:3,17:NULL:163.458:326.675,113.385:0.0,0.0:0.0,4.61361e-05,0.999956
+chr1	8423083	.	ATATATATATATATATATATATATAT	.	.	.	END=8423108;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.596815:13,13:11-14,11-14:14,6,0,0:11,2|12,2|13,8|14,2:NULL:135.215:326.675,113.385:0.827074,0.827074:9.63291e-06,0.326822,0.673181
+chr1	8424107	.	CCAGCCAGCCAG	.	.	.	END=8424118;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,5,0,0:3,22:NULL:132.923:326.675,113.385:0.0,0.0:0.0,9.49426e-07,1.0
+chr1	8433296	.	TATTTATTTATT	.	.	.	END=8433307;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980539:3,3:3-3,3-3:9,1,0,0:3,9:NULL:45.09:326.675,113.385:0.0,0.0:1.04721e-29,0.00803098,0.991988
+chr1	8433511	.	TATATATATATATATATATA	TATATATATATATATATATATA	.	.	END=8433530;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.143587:11,11:8-11,8-11:2,5,0,0:11,2:NULL:53.8357:326.675,113.385:0.842923,0.842923:0.000431743,0.502089,0.497491
+chr1	8433926	.	TATATATATATA	.	.	.	END=8433937;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999781:6,6:6-6,6-6:16,5,0,0:6,16:NULL:109.602:326.675,113.385:0.139319,0.139319:9.12765e-26,0.000111527,0.999888
+chr1	8456266	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8456293;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99989:14,14:11-14,11-14:17,4,0,7:14,17:4,1|5,1|8,1|9,1|10,2|13,1:166.18:326.675,113.385:1.00465,1.00465:4.58367e-29,4.43602e-05,0.999956
+chr1	8470720	.	TCTCTCTCTCTCTC	.	.	.	END=8470733;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:7,7:7-7,7-7:19,15,0,0:7,19:NULL:221.843:326.675,113.385:0.0,0.0:8.84e-43,1.81607e-05,0.999985
+chr1	8470767	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8470826;RU=ct;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0222805:26,26:25-29,25-29:0,11,0,8:NULL:6,3|7,1|11,1|15,1|16,1|17,1:174.168:326.675,113.385:1.64368,1.64368:0.722255,0.257109,0.0206627
+chr1	8470857	.	CTCTCTCTCTCTCTCT	.	.	.	END=8470872;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.868555:8,8:8-8,8-8:6,18,0,3:8,6:6,3:216.942:326.675,113.385:0.0,0.0:1.3158e-11,0.0731223,0.926973
+chr1	8477191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8477250;RU=ga;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.513868:29,30:23-30,23-30:4,9,0,5:29,2|30,2:7,1|12,1|15,1|18,1|19,1:147.648:326.675,113.385:1.81115,1.95434:0.0172261,0.766209,0.216644
+chr1	8480096	.	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	.	.	END=8480191;RU=agaaagga;PERIOD=8;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.364967:6,10:6-11,9-11:4,11,0,18:6,4:2,1|3,2|4,1|5,2|6,3|7,1|8,1|9,5|10,2:242.488:326.675,113.385:0.899956,0.56427:0.61593,0.38413,1.79851e-19
+chr1	8496447	.	TCTCTCTCTCTC	.	.	.	END=8496458;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.068:326.675,113.385:0.0,0.0:7e-45,3.71249e-06,1.0
+chr1	8498887	.	TGTGTGTGTGTG	.	.	.	END=8498898;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999971:6,6:6-6,6-6:18,5,0,0:6,18:NULL:113.239:326.675,113.385:0.0,0.0:8.34546e-39,2.40389e-05,0.999979
+chr1	8500395	.	AGGAAGGAAGGA	.	.	.	END=8500406;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999531:3,3:3-3,3-3:14,11,0,2:3,14:2,2:170.995:326.675,113.385:0.0,0.0:0.0,0.000248712,0.999751
+chr1	8503531	.	TAAATAAATAAA	.	.	.	END=8503542;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998985:3,3:3-3,3-3:13,9,0,4:3,13:2,4:161.383:326.675,113.385:0.0,0.0:1.3e-43,0.000375542,0.999628
+chr1	8504809	.	TTGTTGTTGTTGTTG	.	.	.	END=8504823;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:23,8,0,6:5,23:3,1|4,5:210.727:326.675,113.385:0.0,0.0:0.0,2.7635e-07,1.0
+chr1	8528507	.	TTGTTGTTGTTG	.	.	.	END=8528518;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999939:4,4:4-4,4-4:17,7,0,2:4,17:3,2:151.591:326.675,113.385:0.0,0.0:0.0,3.18312e-05,0.999971
+chr1	8529981	.	AACCAACCAACCAACC	.	.	.	END=8529996;RU=aacc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985496:4,4:4-4,4-4:10,14,0,0:4,10:NULL:167.18:326.675,113.385:0.0,0.0:3.47962e-34,0.0120016,0.988025
+chr1	8536034	.	AAAACAAAACAAAAC	.	.	.	END=8536048;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,15,0,0:3,23:NULL:233.041:326.675,113.385:0.0,0.0:0.0,2.21728e-06,1.0
+chr1	8536113	.	CAACAACAACAACAACAACAACAACAA	.	.	.	END=8536139;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999281:9,9:9-9,9-9:14,16,0,4:9,14:4,1|5,1|8,2:234.098:326.675,113.385:0.0,0.0:2.68761e-26,0.000352468,0.999651
+chr1	8536661	.	ACAACAACAACA	.	.	.	END=8536672;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999897:4,4:4-4,4-4:16,8,0,3:4,16:3,3:158.328:326.675,113.385:0.0,0.0:0.0,3.98677e-05,0.999963
+chr1	8536682	.	CAAACAAACAAA	.	.	.	END=8536693;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999723:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.967:326.675,113.385:0.0,0.0:0.0,0.000151341,0.99985
+chr1	8537537	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=8537556;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991856:4,4:4-4,4-4:10,8,0,2:4,10:3,2:128.224:326.675,113.385:0.0,0.0:6.05885e-31,0.00459612,0.995416
+chr1	8543734	.	AAATAAATAAAT	.	.	.	END=8543745;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997637:3,3:3-3,3-3:12,4,0,0:3,12:NULL:81.7413:326.675,113.385:0.0,0.0:2.84343e-35,0.00106447,0.998938
+chr1	8554881	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=8554988;RU=agaggc;PERIOD=6;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.994923:13,18:4-13,17-18:5,18,0,25:13,3|17,2:3,2|4,2|5,1|7,5|8,4|9,2|10,1|12,1|13,2|14,1|15,2|16,1|18,1:373.705:326.675,113.385:2.97959,0.547696:1.91093e-05,0.999985,2.24371e-15
+chr1	8557824	.	ACACACACACACAC	.	.	.	END=8557837;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:21,11,0,2:7,21:4,1|6,1:197.338:326.675,113.385:0.139319,0.139319:1.6042e-41,2.70255e-06,1.0
+chr1	8567230	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=8567268;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.809962:13,13:13-13,13-13:6,6,0,2:13,6:3,1|9,1:98.1398:326.675,113.385:0.0,0.0:1.63673e-10,0.119958,0.880145
+chr1	8574197	.	CACACACACACA	.	.	.	END=8574208;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,9,0,2:6,25:4,2:198.818:326.675,113.385:0.0,0.0:0.0,2.05172e-07,1.0
+chr1	8575616	.	TGGTGGTGGTGGTGGTGG	.	.	.	END=8575633;RU=tgg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999978:6,6:6-6,6-6:18,8,0,2:6,18:4,1|5,1:159.315:326.675,113.385:0.0,0.0:0.0,1.73442e-05,0.999986
+chr1	8580889	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8580912;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999625:12,12:12-13,12-13:24,10,0,5:12,22|13,2:5,3|11,2:236.795:326.675,113.385:0.284901,0.284901:6.62828e-34,5.70766e-07,1.0
+chr1	8584648	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=8584699;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.24064:26,26:23-26,23-26:2,2,0,5:26,2:5,1|8,1|9,1|14,1|18,1:66.5773:326.675,113.385:0.772658,0.772658:0.000298698,0.390389,0.609378
+chr1	8584700	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATAT	.	.	END=8584747;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.000252147:6,6:6-6,6-6:0,1,0,0:NULL:NULL:8.42831:326.675,113.385:0.0,0.0:0.107513,0.489833,0.402853
+chr1	8585797	.	TATTTATTTATTTATT	.	.	.	END=8585812;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998301:4,4:4-4,4-4:13,11,0,0:4,13:NULL:151.104:326.675,113.385:0.0,0.0:9.11e-43,0.00118285,0.998823
+chr1	8586014	.	TTTATTTATTTA	.	.	.	END=8586025;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.173:326.675,113.385:0.0,0.0:0.0,7.8491e-05,0.999925
+chr1	8594736	.	TGTGTGTGTGTGTG	.	.	.	END=8594749;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99987:7,7:7-7,7-7:16,8,0,5:7,16:4,1|5,2|6,2:178.756:326.675,113.385:0.0,0.0:7.19342e-32,4.09985e-05,0.999963
+chr1	8596349	.	TGTGTGTGTGTG	.	.	.	END=8596360;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986306:6,6:6-6,6-6:10,10,0,0:6,10:NULL:133.658:326.675,113.385:0.0,0.0:4.46305e-24,0.00791973,0.9921
+chr1	8597826	.	CACACACACACACACACACACACACA	.	.	.	END=8597851;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.40379:13,13:13-14,13-14:3,3,0,4:13,3:5,1|11,1|12,2:69.6071:326.675,113.385:0.518267,0.518267:6.64642e-05,0.161811,0.838196
+chr1	8614957	.	AAACAAACAAACAAACAAAC	.	.	.	END=8614976;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995445:5,5:5-5,5-5:11,10,0,2:5,11:4,2:149.524:326.675,113.385:0.0,0.0:6.34409e-38,0.00224629,0.997761
+chr1	8619173	.	GTTGTTGTTGTTGTT	.	.	.	END=8619187;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997823:5,5:5-5,5-5:12,6,0,2:5,12:4,2:118.793:326.675,113.385:0.0,0.0:3.09658e-36,0.000974604,0.999028
+chr1	8628070	.	TTTGTTTGTTTG	.	.	.	END=8628081;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996572:3,3:3-3,3-3:11,5,0,2:3,11:2,2:106.536:326.675,113.385:0.0,0.0:2.83415e-36,0.00109878,0.998906
+chr1	8628100	.	TTGTTTTGTTTTGTT	.	.	.	END=8628114;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999719:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.395:326.675,113.385:0.0,0.0:0.0,0.000150872,0.99985
+chr1	8628129	.	TTTATTTTTATTTTTATT	.	.	.	END=8628146;RU=tttatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999864:3,3:3-3,3-3:16,3,0,0:3,16:NULL:95.0823:326.675,113.385:0.0,0.0:0.0,7.19751e-05,0.999932
+chr1	8631314	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8631341;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988226:14,14:13-14,13-14:18,5,0,2:13,3|14,15:7,1|11,1:144.884:326.675,113.385:0.236383,0.236383:1.25388e-15,0.0117186,0.988308
+chr1	8631352	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8631373;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.679657:11,11:10-12,10-12:14,5,0,3:10,2|11,10|12,2:5,1|10,2:139.777:326.675,113.385:0.653165,0.653165:1.8551e-16,0.0629716,0.937121
+chr1	8631769	.	TTTTGTTTTGTTTTG	.	.	.	END=8631783;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998185:3,3:3-3,3-3:12,9,0,2:3,12:2,2:143.831:326.675,113.385:0.0,0.0:2.94001e-37,0.000914917,0.999089
+chr1	8631787	.	GTTTGTTTGTTT	.	.	.	END=8631798;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:172.164:326.675,113.385:0.0,0.0:0.0,1.10055e-05,0.999993
+chr1	8632668	.	CCCACCCACCCA	CCCACCCACCCACCCACCCA	.	.	END=8632679;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:1.0:3,5:3-3,5-5:31,5,0,0:3,18|5,13:NULL:191.55:326.675,113.385:0.0,0.0:0.0,1.0066e-26,1.0
+chr1	8633725	.	ATAAATAAATAA	.	.	.	END=8633736;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999912:3,3:3-3,3-3:17,7,0,0:3,17:NULL:135.44:326.675,113.385:0.0,0.0:0.0,5.65693e-05,0.999947
+chr1	8633735	.	AACAACAACAAC	.	.	.	END=8633746;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999715:4,4:4-4,4-4:16,10,0,0:4,16:NULL:157.321:326.675,113.385:0.0,0.0:1e-45,0.000207364,0.999796
+chr1	8635079	.	ACCCACCCACCC	.	.	.	END=8635090;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.808579:3,3:3-3,3-3:5,6,0,0:3,5:NULL:73.0765:326.675,113.385:0.0,0.0:7.69984e-14,0.0907137,0.909384
+chr1	8641425	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8641448;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998552:12,12:12-12,12-12:13,2,0,2:12,13:6,1|11,1:88.402:326.675,113.385:0.0,0.0:6.60585e-23,0.000666587,0.999339
+chr1	8642579	.	AAATAAATAAAT	.	.	.	END=8642590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999431:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.869:326.675,113.385:0.0,0.0:1.361e-41,0.00026199,0.999742
+chr1	8642988	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8643027;RU=tc;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.41447:20,20:19-20,19-20:8,11,0,8:19,3|20,5:6,1|8,1|11,1|13,1|14,1|16,1|18,1|19,1:206.384:326.675,113.385:0.484441,0.484441:3.2159e-05,0.557393,0.442685
+chr1	8643034	.	TCTATCTATCTA	.	.	.	END=8643045;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999628:3,3:2-3,2-3:15,11,0,0:3,15:NULL:161.037:326.675,113.385:0.323567,0.323567:7.78753e-29,0.000218365,0.999782
+chr1	8643653	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=8643682;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:6,6:6-6,6-6:17,11,0,5:6,17:3,3|4,1|5,1:207.421:326.675,113.385:0.139319,0.139319:1e-45,5.03197e-05,0.999949
+chr1	8643693	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8643718;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.456917:13,15:13-13,13-15:19,12,0,6:12,2|13,17:5,1|6,1|8,1|10,1|12,1|15,1:257.188:326.675,113.385:0.0,1.01474:4.28029e-29,3.84308e-06,1.0
+chr1	8646828	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=8646863;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998611:9,9:4-9,4-9:13,6,0,4:9,13:6,1|7,2|8,1:137.185:326.675,113.385:2.04948,2.04948:8.80789e-28,0.000791479,0.999211
+chr1	8650375	.	ACACACACACACACACACACACAC	.	.	.	END=8650398;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984644:12,12:11-12,11-12:17,3,0,4:11,3|12,14:8,1|11,3:137.599:326.675,113.385:0.270063,0.270063:5.28161e-17,0.0152271,0.984803
+chr1	8650639	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATAT	.	.	END=8650678;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0175477:16,16:16-20,16-20:0,2,0,0:NULL:NULL:17.2343:326.675,113.385:0.900283,0.900283:0.271692,0.499525,0.228792
+chr1	8650679	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=8650710;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.436188:16,16:16-16,16-16:3,3,0,2:16,3:11,1|15,1:54.5607:326.675,113.385:0.19802,0.19802:1.21553e-05,0.246219,0.753781
+chr1	8651209	.	AATAAATAAATA	.	.	.	END=8651220;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,5,0,3:3,24:2,3:160.953:326.675,113.385:0.0,0.0:0.0,1.48101e-07,1.0
+chr1	8651810	.	AAAACAAAAACAAAAACA	.	.	.	END=8651827;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989372:3,3:3-3,3-3:10,8,0,0:3,10:NULL:112.49:326.675,113.385:0.0,0.0:6.9492e-33,0.0064146,0.993602
+chr1	8653498	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	.	END=8653537;RU=aagaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998573:8,8:8-8,8-8:13,12,0,5:8,13:3,1|4,1|5,2|7,1:202.014:326.675,113.385:0.0,0.0:4.65052e-38,0.000786841,0.999218
+chr1	8654962	.	CTCTCTCCTCTCTCCTCTCTC	.	.	.	END=8654982;RU=ctctctc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99915:3,3:3-3,3-3:14,11,0,0:3,14:NULL:158.356:326.675,113.385:0.0,0.0:5.11259e-39,0.00063414,0.99937
+chr1	8655539	.	TGTATATACAGTTTGTATATACAGTTTGTATATACAGTT	.	.	.	END=8655577;RU=tgtatatacagtt;PERIOD=13;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,11,0,0:3,27:NULL:220.313:326.675,113.385:0.0,0.0:7.89224e-34,2.1361e-07,1.0
+chr1	8661278	.	TCTGCGCACTGCCTCTCTGCGCACTGCCTCTCTGCGCACTGCCTC	.	.	.	END=8661322;RU=tctgcgcactgcctc;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999987:3,3:3-3,3-3:20,7,0,0:3,20:NULL:149.294:326.675,113.385:0.0,0.0:1.29928e-24,2.25915e-05,0.999979
+chr1	8662879	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8662932;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.79467:27,27:26-28,26-28:6,9,0,13:27,6:8,1|11,1|13,1|14,1|15,1|16,2|17,1|18,2|22,1|23,1|27,1:210.896:326.675,113.385:0.464609,0.464609:1.75214e-14,0.0702106,0.929885
+chr1	8670288	.	AAATAAATAAAT	.	.	.	END=8670299;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.846:326.675,113.385:0.0,0.0:0.0,7.53837e-06,0.999994
+chr1	8675250	.	CACACACACACACACACA	.	.	.	END=8675267;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.69922:9,9:5-10,5-10:20,9,0,0:5,2|8,2|9,14|10,2:NULL:190.405:326.675,113.385:1.99244,1.99244:2.03531e-21,0.280196,0.719807
+chr1	8675272	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8675305;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.907371:17,17:15-18,15-18:12,11,0,4:16,2|17,10:4,1|13,1|15,1|16,1:191.535:326.675,113.385:0.615775,0.615775:1.33605e-10,0.0899302,0.910167
+chr1	8675459	.	ACAGAAACACAGAAACACAGAAAC	.	.	.	END=8675482;RU=acagaaac;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999268:3,3:3-3,3-3:13,10,0,2:3,13:2,2:159.691:326.675,113.385:0.0,0.0:9.36e-43,0.000455439,0.999546
+chr1	8675986	.	ATTTATTTATTT	.	.	.	END=8675997;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999964:3,3:3-3,3-3:18,12,0,0:3,18:NULL:186.787:326.675,113.385:0.0,0.0:0.0,2.80001e-05,0.999972
+chr1	8676389	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=8676418;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999914:6,6:6-6,6-6:17,9,0,8:6,17:3,3|4,2|5,3:213.522:326.675,113.385:0.0,0.0:5.66594e-34,3.7178e-05,0.999964
+chr1	8678460	.	TGTGTGTGTGTGTGTGTGTG	.	.	.	END=8678479;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.896921:10,10:10-11,10-11:7,4,0,2:10,7:5,1|8,1:79.5285:326.675,113.385:0.475866,0.475866:1.70654e-11,0.0425545,0.957517
+chr1	8678493	.	TACATATATACATATATACATATA	.	.	.	END=8678516;RU=tacatata;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992139:3,3:3-3,3-3:10,4,0,2:3,10:2,2:88.166:326.675,113.385:0.0,0.0:2.3385e-30,0.00314205,0.996867
+chr1	8679768	.	ATAAAATAAAATAAA	.	.	.	END=8679782;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.886:326.675,113.385:0.0,0.0:0.0,3.57574e-07,1.0
+chr1	8681683	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	.	END=8681750;RU=aagg;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.280034:17,17:13-17,13-17:2,17,0,19:17,2:2,1|4,1|5,2|6,2|7,3|8,1|10,3|12,1|13,3|15,2:298.812:326.675,113.385:1.83337,1.83337:2.37018e-05,0.427834,0.572237
+chr1	8682359	.	CACACACACACACACACACA	.	.	.	END=8682378;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999694:10,10:10-11,10-11:15,17,0,8:10,15:6,2|7,1|8,1|9,3|10,1:286.511:326.675,113.385:0.169767,0.169767:4.6019e-29,8.81946e-05,0.999911
+chr1	8682430	.	CTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8682441;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.451644:6,13:6-6,5-13:14,17,0,2:5,2|6,12:5,1|13,1:252.805:326.675,113.385:0.0,3.78075:7.49433e-20,0.000777866,0.999226
+chr1	8682935	.	CACACACACACACACA	.	.	.	END=8682950;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999976:8,8:8-8,8-8:18,12,0,2:8,18:4,1|6,1:195.974:326.675,113.385:0.0,0.0:1.15451e-31,2.82206e-05,0.999972
+chr1	8703164	.	GGCTCAGGGCTCAGGGCTCAG	.	.	.	END=8703184;RU=ggctcag;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,17,0,3:3,20:2,3:257.668:326.675,113.385:0.0,0.0:0.0,6.52146e-06,0.999994
+chr1	8704534	.	AACAAACAAACA	.	.	.	END=8704545;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,8,0,0:3,28:NULL:181.495:326.675,113.385:0.0,0.0:0.0,2.64883e-08,1.0
+chr1	8705430	.	CAAACAAACAAA	.	.	.	END=8705441;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999935:3,3:3-3,3-3:17,12,0,0:3,17:NULL:172.513:326.675,113.385:0.0,0.0:0.0,4.61238e-05,0.999956
+chr1	8707303	.	ATGATGATGATG	.	.	.	END=8707314;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:196.225:326.675,113.385:0.0,0.0:0.0,3.46047e-07,1.0
+chr1	8713399	.	AGCAGCAGCAGC	.	.	.	END=8713410;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:222.677:326.675,113.385:0.0,0.0:0.0,2.32344e-07,1.0
+chr1	8714830	.	CATAACATAACATAACATAACATAA	.	.	.	END=8714854;RU=cataa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.942765:5,5:5-5,5-5:7,8,0,6:5,7:2,1|3,3|4,2:140.677:326.675,113.385:0.0,0.0:7.30822e-19,0.0268526,0.973201
+chr1	8723775	.	CACACACACACACA	.	.	.	END=8723788;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976786:7,7:6-7,6-7:20,12,0,0:6,2|7,18:NULL:198.465:326.675,113.385:0.44763,0.44763:9.9095e-36,0.0232696,0.976773
+chr1	8723801	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=8723818;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999479:9,9:9-9,9-9:15,14,0,0:9,15:NULL:187.994:326.675,113.385:0.0,0.0:3.7835e-27,0.000316983,0.999683
+chr1	8724576	.	AAAGAAAGAAAG	.	.	.	END=8724587;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999755:3,3:3-3,3-3:15,7,0,2:3,15:2,2:134.146:326.675,113.385:0.0,0.0:0.0,9.06099e-05,0.999911
+chr1	8734504	.	ACACACACACAC	.	.	.	END=8734515;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980354:6,6:5-7,5-7:19,5,0,2:5,2|6,17:4,1|5,1:149.183:326.675,113.385:0.503882,0.503882:8.75392e-34,0.0196928,0.980346
+chr1	8735119	.	CACACACACACACACACACACACACACACA	.	.	.	END=8735148;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.943262:15,15:14-15,14-15:12,4,0,4:14,2|15,10:5,2|10,1|12,1:123.677:326.675,113.385:0.298675,0.298675:5.12276e-12,0.0537033,0.946383
+chr1	8737285	.	AAACAAACAAAC	.	.	.	END=8737296;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.572:326.675,113.385:0.0,0.0:0.0,8.58223e-09,1.0
+chr1	8737336	.	ACAAAACAAAACAAAACAAAACAAAACAAA	.	.	.	END=8737365;RU=acaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993833:6,6:6-6,6-6:10,13,0,5:6,10:3,1|4,1|5,3:191.525:326.675,113.385:0.0,0.0:3.38817e-33,0.00281481,0.997193
+chr1	8737581	.	AAAACAAAACAAAACAAAAC	.	.	.	END=8737600;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995904:4,4:4-4,4-4:11,4,0,3:4,11:3,3:102.332:326.675,113.385:0.0,0.0:8.70255e-37,0.00136317,0.998641
+chr1	8743177	.	TATATATATATATA	.	.	.	END=8743190;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.889317:7,7:6-8,6-8:7,5,0,0:7,7:NULL:73.888:326.675,113.385:0.608246,0.608246:3.74191e-10,0.065115,0.934977
+chr1	8743192	.	TTGTTGTTGTTGTTG	.	.	.	END=8743206;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995999:5,5:5-5,5-5:11,8,0,2:5,11:3,1|4,1:129.239:326.675,113.385:0.0,0.0:1.82559e-33,0.00187478,0.998132
+chr1	8747307	.	CTTTCTTTCTTT	.	.	.	END=8747318;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998932:3,3:3-3,3-3:13,6,0,0:3,13:NULL:103.89:326.675,113.385:0.0,0.0:9.97061e-38,0.00050504,0.999499
+chr1	8747937	.	TTTATTTATTTA	.	.	.	END=8747948;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98465:3,3:3-3,3-3:9,4,0,0:3,9:NULL:73.8153:326.675,113.385:0.0,0.0:7.94114e-30,0.00766915,0.992348
+chr1	8748060	.	TTTTGTTTTGTTTTG	.	.	.	END=8748074;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990939:3,3:3-3,3-3:10,5,0,0:3,10:NULL:87.1438:326.675,113.385:0.0,0.0:2.88402e-32,0.00531553,0.9947
+chr1	8750524	.	TCTCTCTCTCTC	.	.	.	END=8750535;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997357:6,6:6-6,6-6:12,5,0,2:6,12:4,2:114.706:326.675,113.385:0.0,0.0:1.90457e-24,0.00151952,0.998488
+chr1	8750590	.	TCTCTCTCTC	.	.	.	END=8750599;RU=tc;PERIOD=2;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989181:5,5:5-13,5-13:11,5,0,0:5,11:NULL:93.3733:326.675,113.385:3.99824,3.99824:3.62781e-27,0.00379959,0.99621
+chr1	8753159	.	AGAGAGAGAGAG	.	.	.	END=8753170;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999963:6,6:6-6,6-6:17,14,0,3:6,17:4,1|5,2:225.969:326.675,113.385:0.0,0.0:4.18258e-39,1.76549e-05,0.999986
+chr1	8754911	.	TTTGTTTGTTTG	.	.	.	END=8754922;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997164:3,3:3-4,3-4:12,9,0,0:3,12:NULL:132.107:326.675,113.385:0.475866,0.475866:1.13921e-40,0.00179077,0.998216
+chr1	8758313	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=8758332;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999632:5,5:5-5,5-5:14,10,0,3:5,14:3,2|4,1:170.794:326.675,113.385:0.0,0.0:7.5234e-41,0.000212208,0.999789
+chr1	8759459	.	TATTTATTTATT	.	.	.	END=8759470;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999922:3,3:3-3,3-3:17,6,0,0:3,17:NULL:121.223:326.675,113.385:0.0,0.0:0.0,4.54659e-05,0.999956
+chr1	8765668	.	AATAAATAAATA	.	.	.	END=8765679;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959532:3,3:3-3,3-3:8,5,0,0:3,8:NULL:77.3003:326.675,113.385:0.0,0.0:1.84624e-26,0.0212171,0.978826
+chr1	8771953	.	AGGAAAGGAAAGGAA	.	.	.	END=8771967;RU=aggaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999792:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.516:326.675,113.385:0.0,0.0:0.0,0.000158064,0.999843
+chr1	8778970	.	TTTCTTTCTTTC	.	.	.	END=8778981;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:175.96:326.675,113.385:0.0,0.0:0.0,6.06985e-06,0.999994
+chr1	8783282	.	ATATATATATATAT	.	.	.	END=8783295;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.49888:7,7:6-7,6-7:10,3,0,0:6,2|7,8:NULL:75.1751:326.675,113.385:0.486863,0.486863:9.80189e-09,0.497037,0.502977
+chr1	8784610	.	ACACACACACACACACACACACACACACACACACACAC	.	.	.	END=8784647;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.971893:19,19:17-19,17-19:9,6,0,7:19,9:7,1|11,2|13,1|17,2|18,1:148.768:326.675,113.385:0.634591,0.634591:7.52986e-13,0.0110308,0.988993
+chr1	8784672	.	AAAACAAAACAAAAC	.	.	.	END=8784686;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998793:3,3:3-3,3-3:13,9,0,0:3,13:NULL:133.991:326.675,113.385:0.0,0.0:1e-44,0.000765121,0.99924
+chr1	8785066	.	TAAATAAATAAA	.	.	.	END=8785077;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999799:3,3:3-3,3-3:16,6,0,0:3,16:NULL:123.274:326.675,113.385:0.0,0.0:0.0,0.000122937,0.999879
+chr1	8786909	.	CTCTTGCTCTTGCTCTTGCTCTTG	.	.	.	END=8786932;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998131:4,4:4-4,4-4:12,17,0,3:4,12:3,3:221.197:326.675,113.385:0.0,0.0:8.55373e-35,0.00145832,0.998549
+chr1	8790230	.	CTCTTGCTCTTGCTCTTGCTCTTG	.	.	.	END=8790253;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985433:4,4:4-4,4-4:9,11,0,2:4,9:3,2:153.147:326.675,113.385:0.0,0.0:4.64383e-30,0.00909807,0.990925
+chr1	8794964	.	ATATATATATATATATATATATAT	ATATATATATATATATATATAT	.	.	END=8794987;RU=at;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.932931:11,12:11-12,11-12:6,5,0,0:11,2|12,4:NULL:74.3812:326.675,113.385:0.484441,0.21692:0.00011127,0.943244,0.0567284
+chr1	8796394	.	ATTTATTTATTT	.	.	.	END=8796405;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998744:3,3:3-3,3-3:13,7,0,0:3,13:NULL:116.182:326.675,113.385:0.0,0.0:1.53173e-38,0.000632784,0.99937
+chr1	8798684	.	AGCAGCAGCAGC	.	.	.	END=8798695;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:226.317:326.675,113.385:0.0,0.0:0.0,5.43975e-06,0.999995
+chr1	8800250	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	.	END=8800297;RU=agga;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.594842:12,12:12-12,12-12:4,8,0,10:12,4:2,1|4,2|6,1|7,2|8,1|9,2|11,1:162.595:326.675,113.385:0.0990099,0.0990099:1.58453e-08,0.225544,0.774489
+chr1	8800676	.	TAAATAAATAAA	.	.	.	END=8800687;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99217:3,3:3-3,3-3:10,8,0,2:3,10:2,2:128.633:326.675,113.385:0.0,0.0:5.11394e-33,0.00312934,0.996881
+chr1	8800714	.	AACAACAACAAC	.	.	.	END=8800725;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992712:4,4:4-4,4-4:11,10,0,0:4,11:NULL:135.379:326.675,113.385:0.0,0.0:6.64144e-31,0.00496701,0.995047
+chr1	8805447	.	GGGGGAGGGGGAGGGGGA	.	.	.	END=8805464;RU=ggggga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990143:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.811:326.675,113.385:0.0,0.0:1.04539e-30,0.00676799,0.993249
+chr1	8807437	.	TTTGTTTGTTTG	.	.	.	END=8807448;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:195.556:326.675,113.385:0.0,0.0:0.0,1.13934e-06,1.0
+chr1	8810096	.	TAAATAAATAAA	.	.	.	END=8810107;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999928:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.067:326.675,113.385:0.0,0.0:0.0,3.91424e-05,0.999963
+chr1	8810477	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=8810494;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999814:3,3:3-3,3-3:15,12,0,3:3,15:2,3:192.709:326.675,113.385:0.0,0.0:0.0,9.18495e-05,0.99991
+chr1	8814191	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8814208;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966826:9,9:8-10,8-10:17,3,0,5:8,3|9,14:4,1|7,1|8,2|9,1:142.198:326.675,113.385:0.461008,0.461008:3.05001e-29,0.0331402,0.966922
+chr1	8815663	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8815726;RU=tc;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0181341:28,28:28-32,28-32:0,8,0,7:NULL:4,1|8,1|9,1|11,1|21,1|22,1|26,1:128.18:326.675,113.385:1.25387,1.25387:0.387564,0.473392,0.139121
+chr1	8816641	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8816672;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.80832:16,16:15-16,15-16:10,9,0,4:15,2|16,8:8,1|12,1|15,2:161.939:326.675,113.385:0.390807,0.390807:1.74484e-09,0.183516,0.816552
+chr1	8817844	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8817913;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.011417:34,34:9-34,9-34:0,11,0,8:NULL:9,2|11,1|18,1|21,1|23,1|29,1|33,1:161.9:326.675,113.385:9.00396,9.00396:0.497947,0.47067,0.0314397
+chr1	8819083	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8819132;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.153341:26,26:24-26,24-26:2,12,0,10:26,2:5,2|6,2|8,1|10,1|16,1|17,1|19,1|23,1:201.787:326.675,113.385:0.915079,0.915079:0.000331256,0.3795,0.620228
+chr1	8820361	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8820396;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.294315:18,23:18-19,16-23:9,9,0,9:18,7|19,2:5,2|6,1|8,1|9,2|13,1|14,1|23,1:201.422:326.675,113.385:0.236383,2.38098:3.51614e-15,2.22824e-07,1.0
+chr1	8823929	.	TGGGTGGGTGGG	.	.	.	END=8823940;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99987:3,3:3-3,3-3:15,12,0,3:3,15:2,3:186.501:326.675,113.385:0.0,0.0:0.0,6.40528e-05,0.99994
+chr1	8824054	.	ATTTATTTATTT	.	.	.	END=8824065;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,8,0,2:3,30:2,2:203.191:326.675,113.385:0.0,0.0:0.0,2.58817e-09,1.0
+chr1	8827247	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=8827291;RU=ttg;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:15,15:15-15,15-15:19,13,0,15:15,19:3,2|4,1|5,1|6,1|7,2|9,1|10,1|11,1|12,1|13,1|14,3:312.501:326.675,113.385:0.0,0.0:1.25107e-38,7.04996e-06,0.999994
+chr1	8833833	.	ACCACCACCACCACCACC	.	.	.	END=8833850;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:28,11,0,8:6,28:3,1|4,3|5,4:273.788:326.675,113.385:0.0,0.0:0.0,1.24028e-08,1.0
+chr1	8834106	.	AAAGAAAGAAAG	.	.	.	END=8834117;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:202.146:326.675,113.385:0.0,0.0:0.0,3.19142e-06,1.0
+chr1	8835404	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8835449;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.679654:22,23:22-23,23-23:17,12,0,13:22,7|23,10:5,2|6,1|7,2|8,1|9,1|17,2|20,1|21,1|22,2:298.777:326.675,113.385:0.495841,0.0:9.49549e-09,0.679662,0.320347
+chr1	8837723	.	AATAAATAAATAAATA	.	.	.	END=8837738;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999735:4,4:4-4,4-4:15,4,0,2:4,15:2,1|3,1:108.529:326.675,113.385:0.0,0.0:1e-45,0.000120001,0.99988
+chr1	8840838	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	.	END=8840876;RU=ctt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997373:13,13:13-13,13-13:12,17,0,8:13,12:4,1|6,1|8,1|9,3|10,1|11,1:258.066:326.675,113.385:0.0,0.0:6.14404e-33,0.00142455,0.99858
+chr1	8848162	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8848191;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991418:15,15:13-16,13-16:11,4,0,6:15,11:5,1|6,2|10,1|14,2:136.868:326.675,113.385:0.489474,0.489474:2.55922e-15,0.00317791,0.99683
+chr1	8848195	.	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=8848293;RU=gaa;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.322535:32,32:30-34,30-34:2,9,0,12:32,2:4,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|28,1|30,1|31,1|32,1:189.229:326.675,113.385:0.626507,0.626507:0.539029,0.458295,0.00279247
+chr1	8848386	.	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	.	.	.	END=8848480;RU=gggaa;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.460313:19,19:18-19,18-19:3,9,0,13:19,3:3,1|5,1|8,1|10,1|11,1|13,1|15,1|17,1|18,5:193.919:326.675,113.385:0.284901,0.284901:1.42522e-06,0.210658,0.789391
+chr1	8850301	.	CATACATACATA	.	.	.	END=8850312;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,3,0,2:3,20:2,2:124.456:326.675,113.385:0.0,0.0:0.0,3.10488e-06,1.0
+chr1	8851721	.	AGAAAGAAAGAAAGAAAGAAAGAA	.	.	.	END=8851744;RU=agaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995531:6,6:5-6,5-6:11,23,0,5:6,11:2,1|4,1|5,3:285.933:326.675,113.385:0.425627,0.425627:3.18763e-21,0.00288447,0.997124
+chr1	8852685	.	GGGTGGGTGGGT	.	.	.	END=8852696;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.928769:3,3:3-3,3-3:7,21,0,0:3,7:NULL:222.275:326.675,113.385:0.19802,0.19802:3.35873e-21,0.043614,0.956457
+chr1	8856513	.	TATATATATATA	.	.	.	END=8856524;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.891103:6,6:5-6,5-6:14,3,0,0:5,3|6,11:NULL:92.127:326.675,113.385:0.36513,0.36513:2.12696e-13,0.10786,0.892238
+chr1	8857202	.	GAGAGAGAGAGA	.	.	.	END=8857213;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999129:6,6:5-6,5-6:13,8,0,3:6,13:5,3:149.8:326.675,113.385:0.419363,0.419363:1.06978e-35,0.000363674,0.999637
+chr1	8860742	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8860779;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.996848:19,20:18-19,18-20:11,5,0,14:18,2|19,6|20,3:4,1|5,2|6,2|7,1|9,1|10,2|13,2|14,1|20,2:219.945:326.675,113.385:0.323567,0.363786:2.20948e-23,0.000960826,0.999043
+chr1	8863873	.	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	.	.	END=8863991;RU=ctgcctg;PERIOD=7;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.179105:16,16:14-16,14-16:0,18,0,32:NULL:2,1|3,4|4,1|6,3|7,1|8,5|9,2|10,2|11,4|13,4|14,1|15,2|16,2:378.902:326.675,113.385:0.607763,0.607763:0.385714,0.501196,0.113186
+chr1	8865199	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8865252;RU=tc;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.968546:26,27:5-27,5-27:19,8,0,9:25,4|26,6|27,9:5,2|6,1|8,1|12,1|15,1|16,1|22,1|26,1:251.944:326.675,113.385:9.18917,7.11396:2.393e-07,0.974888,0.0251617
+chr1	8865253	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8865286;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.353293:17,18:17-17,17-18:11,8,0,5:17,11:15,4|18,1:170.877:326.675,113.385:0.0,0.537032:1.58965e-25,3.94925e-08,1.0
+chr1	8865886	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8865933;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.590958:24,24:24-25,24-25:16,11,0,12:24,13|25,3:5,1|7,2|12,1|13,3|15,1|17,1|19,1|21,1|23,1:275.553:326.675,113.385:0.481803,0.481803:4.06428e-17,0.000140235,0.999864
+chr1	8866609	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8866646;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.898856:19,20:19-19,19-20:19,17,0,16:18,2|19,17:5,2|6,1|9,1|10,1|11,2|12,2|14,2|15,4|20,1:390.696:326.675,113.385:0.0,0.472558:6.33979e-22,2.9656e-07,1.0
+chr1	8868138	.	CAAACCAAACCAAAC	.	.	.	END=8868152;RU=caaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,22,0,0:3,28:NULL:315.714:326.675,113.385:0.0,0.0:0.0,4.2339e-08,1.0
+chr1	8869124	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8869175;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.029014:23,23:23-26,23-26:0,2,0,0:NULL:NULL:22.634:326.675,113.385:1.2356,1.2356:0.258741,0.506922,0.23435
+chr1	8870489	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8870542;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.229769:27,39:25-27,26-41:5,8,0,13:26,3|27,2:5,2|6,1|11,1|14,1|18,1|19,2|21,1|22,2|23,1|39,1:209.587:326.675,113.385:1.34486,6.22146:1.87855e-07,0.175017,0.825054
+chr1	8870819	.	TTTTATTTTATTTTA	.	.	.	END=8870833;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,7,0,0:3,30:NULL:183.953:326.675,113.385:0.0,0.0:0.0,4.23064e-09,1.0
+chr1	8881143	.	AAATAAATAAAT	.	.	.	END=8881154;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.894:326.675,113.385:0.0,0.0:0.0,6.30973e-07,1.0
+chr1	8891081	.	CATGCATGCATG	.	.	.	END=8891092;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999769:3,3:3-3,3-3:15,6,0,0:3,15:NULL:121.647:326.675,113.385:0.0,0.0:3.8172e-31,0.000124544,0.999879
+chr1	8894445	.	TTTGTTTGTTTG	.	.	.	END=8894456;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:123.879:326.675,113.385:0.0,0.0:0.0,3.92141e-06,0.999995
+chr1	8896564	.	TCTTTCTTTCTT	.	.	.	END=8896575;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,9,0,2:3,26:2,2:200.704:326.675,113.385:0.0,0.0:0.0,3.85101e-08,1.0
+chr1	8896983	.	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTT	.	.	.	END=8897012;RU=tttgtt;PERIOD=6;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999962:5,5:5-5,5-5:17,20,0,6:5,17:2,3|3,1|4,2:291.268:326.675,113.385:0.0,0.0:1e-45,4.48778e-05,0.999956
+chr1	8902045	.	TCTCCTCTCCTCTCCTCTCC	.	.	.	END=8902064;RU=tctcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,6,0,4:4,25:3,4:184.34:326.675,113.385:0.0,0.0:0.0,7.11103e-08,1.0
+chr1	8903368	.	TAAATAAATAAA	.	.	.	END=8903379;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999722:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.598:326.675,113.385:0.0,0.0:0.0,0.000152183,0.999849
+chr1	8905683	.	TCTCTCTCTCTC	.	.	.	END=8905694;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,16,0,0:6,22:NULL:232.951:326.675,113.385:0.0,0.0:0.0,1.45279e-06,1.0
+chr1	8907395	.	CACACACACACA	.	.	.	END=8907406;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995262:6,6:6-6,6-6:11,12,0,0:6,11:NULL:159.469:326.675,113.385:0.0,0.0:9.17521e-26,0.00274876,0.99726
+chr1	8909209	.	TATACATATACATATACATATACATATACATATACATATACATATACA	.	.	.	END=8909256;RU=tataca;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.868755:8,8:8-11,8-11:7,8,0,3:8,7:3,2|6,1:123.592:326.675,113.385:1.47322,1.47322:1.3311e-16,0.0746377,0.925456
+chr1	8909266	.	AGAGAGAGAGAGAG	.	.	.	END=8909279;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.865302:7,7:7-7,7-7:7,9,0,0:7,7:NULL:109.484:326.675,113.385:0.0,0.0:1.3106e-16,0.077319,0.922778
+chr1	8909506	.	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	.	.	.	END=8909589;RU=catcta;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.83448:14,14:14-14,14-14:5,10,0,19:14,5:3,2|5,3|6,1|7,1|8,2|9,1|11,1|12,3|13,5:241.438:326.675,113.385:0.0990099,0.0990099:2.26933e-10,0.0688562,0.931239
+chr1	8912340	.	ATTTATTTATTT	.	.	.	END=8912351;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.168:326.675,113.385:0.0,0.0:0.0,3.28267e-06,1.0
+chr1	8917312	.	GTTTGTTTGTTT	.	.	.	END=8917323;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.076:326.675,113.385:0.0,0.0:0.0,6.01145e-06,0.999995
+chr1	8917711	.	TTTGTTTGTTTGTTTG	.	.	.	END=8917726;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:240.042:326.675,113.385:0.0,0.0:0.0,7.93477e-07,1.0
+chr1	8926905	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	.	END=8926964;RU=tttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.527139:15,15:8-15,8-15:4,7,0,9:15,4:2,1|3,1|4,1|5,1|7,1|11,2|12,1|14,1:152.15:326.675,113.385:3.13625,3.13625:2.44555e-09,0.341895,0.658126
+chr1	8927634	.	CTCTCTCTCTCTCTCT	.	.	.	END=8927649;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:8,8:8-8,8-8:28,18,0,6:7,2|8,26:4,1|6,2|7,3:336.47:326.675,113.385:0.0,0.0:2.082e-42,6.42184e-06,0.999995
+chr1	8928347	.	AAACAAACAAACAAAC	.	.	.	END=8928362;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999279:4,4:4-4,4-4:14,14,0,0:4,14:NULL:181.16:326.675,113.385:0.0,0.0:0.0,0.000534942,0.999469
+chr1	8931732	.	TTTGTTTGTTTGTTTG	.	.	.	END=8931747;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995511:4,4:4-4,4-4:11,3,0,2:4,11:2,1|3,1:84.3862:326.675,113.385:0.0,0.0:3.83811e-36,0.00198111,0.998026
+chr1	8932575	.	TTTATTTATTTATTTA	.	.	.	END=8932590;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99834:4,4:4-4,4-4:13,15,0,0:4,13:NULL:182.651:326.675,113.385:0.0,0.0:2.88158e-36,0.00128161,0.998724
+chr1	8937294	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=8937311;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999731:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.413:326.675,113.385:0.0,0.0:8.13e-43,0.000145271,0.999857
+chr1	8942569	.	TCTTTCTTTCTTTCTT	.	.	.	END=8942584;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99744:4,4:4-4,4-4:12,5,0,0:4,12:NULL:92.7736:326.675,113.385:0.0,0.0:6.66647e-35,0.00157776,0.998428
+chr1	8943948	.	GTTTTTGTTTTTGTTTTT	.	.	.	END=8943965;RU=gttttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998791:3,3:3-3,3-3:13,5,0,0:3,13:NULL:96.9382:326.675,113.385:0.0,0.0:5.3e-44,0.000689368,0.999316
+chr1	8944123	.	GTTGGTTGGTTGGTTGGTTG	.	.	.	END=8944142;RU=gttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,8,0,7:5,25:3,2|4,5:221.734:326.675,113.385:0.0,0.0:0.0,7.72888e-08,1.0
+chr1	8945703	.	ACACACACACACACAC	.	.	.	END=8945718;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99982:8,8:8-8,8-8:16,5,0,6:8,16:5,1|6,3|7,2:154.178:326.675,113.385:0.0,0.0:2.7511e-30,5.01359e-05,0.999949
+chr1	8946213	.	ACACACACACACACACACACAC	.	.	.	END=8946234;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993926:11,11:10-11,10-11:20,6,0,5:10,2|11,18:4,1|5,1|9,1|10,2:180.137:326.675,113.385:0.398753,0.398753:2.41738e-26,0.00609946,0.993917
+chr1	8949155	.	ATTTATTTATTT	.	.	.	END=8949166;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999001:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.5095:326.675,113.385:0.0,0.0:2.07056e-40,0.000524939,0.999477
+chr1	8954485	.	AATAAATAAATAAATA	.	.	.	END=8954500;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995693:4,4:4-4,4-4:11,8,0,2:4,11:3,2:132.213:326.675,113.385:0.0,0.0:2.8702e-33,0.00223349,0.997775
+chr1	8957579	.	AAACAAACAAAC	.	.	.	END=8957590;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:3,3:3-3,3-3:17,6,0,2:3,17:2,2:133.668:326.675,113.385:0.0,0.0:0.0,2.2052e-05,0.999979
+chr1	8962592	.	TTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=8962619;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991848:7,7:7-8,7-8:10,7,0,4:7,10:5,2|6,2:139.12:326.675,113.385:0.452422,0.452422:1.87179e-23,0.0030756,0.996935
+chr1	8966427	.	AATGAATGAATGAATG	.	.	.	END=8966442;RU=aatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999909:4,4:4-4,4-4:16,8,0,4:4,16:3,4:164.559:326.675,113.385:0.0,0.0:0.0,3.99346e-05,0.999963
+chr1	8967541	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=8967565;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991041:5,5:5-5,5-5:10,6,0,2:5,10:4,2:114.147:326.675,113.385:0.0,0.0:2.27669e-34,0.00402819,0.995983
+chr1	8969212	.	CTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=8969235;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.660708:12,12:12-13,12-13:5,1,0,4:12,5:6,1|7,1|9,1|10,1:61.3337:326.675,113.385:0.345543,0.345543:4.09213e-05,0.150859,0.849184
+chr1	8969424	.	TATATATATATATATATATATATATATATATATATATATA	.	.	.	END=8969463;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.174936:20,20:18-20,18-20:2,2,0,0:20,2:NULL:27.3013:326.675,113.385:0.744881,0.744881:0.00757335,0.50548,0.487012
+chr1	8969463	.	AGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8969486;RU=ag;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.922272:12,12:12-12,12-12:7,4,0,3:12,7:7,1|10,1|11,1:88.785:326.675,113.385:0.0,0.0:6.57346e-13,0.027556,0.972496
+chr1	8974355	.	CATCATCATCAT	.	.	.	END=8974366;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,23,0,0:4,24:NULL:300.522:326.675,113.385:0.0,0.0:0.0,8.12535e-07,1.0
+chr1	8976339	.	TTATTATTATTA	.	.	.	END=8976350;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:4,4:4-5,4-5:20,14,0,0:4,20:NULL:213.92:326.675,113.385:0.431574,0.431574:0.0,1.74031e-05,0.999986
+chr1	8976507	.	CCCACCCACCCA	.	.	.	END=8976518;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:37,21,0,2:3,37:2,2:353.756:326.675,113.385:0.0,0.0:0.0,5.56012e-11,1.0
+chr1	8977413	.	AGGAGGAGGAGG	.	.	.	END=8977424;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:4,4:4-4,4-4:18,18,0,2:4,18:3,2:251.578:326.675,113.385:0.0,0.0:0.0,1.51235e-05,0.999986
+chr1	8978639	.	AAAATTAAAATTAAAATT	.	.	.	END=8978656;RU=aaaatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999948:3,3:3-3,3-3:17,12,0,0:3,17:NULL:178.649:326.675,113.385:0.0,0.0:0.0,4.79368e-05,0.999955
+chr1	8992158	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=8992189;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997771:8,8:8-8,8-8:12,21,0,8:8,12:3,1|4,1|6,4|7,2:299.467:326.675,113.385:0.0,0.0:4.40686e-32,0.00147235,0.998534
+chr1	8996946	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8996997;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.250404:25,28:25-28,25-28:2,5,0,9:25,2:9,1|15,3|16,1|17,1|19,1|25,1|28,1:129.107:326.675,113.385:0.807523,0.960549:6.73269e-08,0.946104,0.053981
+chr1	8997017	.	TTTCTTTCTTTC	.	.	.	END=8997028;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999859:3,3:3-3,3-3:16,2,0,0:3,16:NULL:80.5162:326.675,113.385:0.0,0.0:0.0,6.20326e-05,0.999941
+chr1	9000049	.	ATGATGATGATG	.	.	.	END=9000060;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,15,0,2:4,24:3,2:250.432:326.675,113.385:0.0,0.0:0.0,4.66483e-07,1.0
+chr1	9000143	.	AAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=9000170;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:24,13,0,11:7,24:2,2|4,3|5,2|6,4:298.135:326.675,113.385:0.0,0.0:0.0,1.88854e-07,1.0
+chr1	9003159	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=9003188;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9442:15,15:14-15,14-15:8,5,0,5:15,8:5,1|9,2|10,1|11,1:120.392:326.675,113.385:0.195027,0.195027:3.1254e-15,0.0284693,0.971582
+chr1	9003186	.	TCTATCTATCTATCTA	.	.	.	END=9003201;RU=tcta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986866:4,4:4-4,4-4:10,3,0,0:4,10:NULL:68.9658:326.675,113.385:0.0,0.0:3.03064e-13,0.00828464,0.991734
+chr1	9007831	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9007856;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.858364:13,13:12-14,12-14:21,8,0,4:12,5|13,14|14,2:9,1|11,2|12,1:214.993:326.675,113.385:0.560784,0.560784:4.82571e-17,0.137341,0.862749
+chr1	9008428	.	TATTTATTTATT	.	.	.	END=9008439;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:193.865:326.675,113.385:0.0,0.0:0.0,2.09592e-07,1.0
+chr1	9010782	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9010839;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0249467:22,22:22-25,22-25:0,3,0,2:NULL:5,1|19,1:40.9669:326.675,113.385:1.44541,1.44541:1.0,0.0,0.0
+chr1	9010840	.	ACACACACACACACAC	.	.	.	END=9010855;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.392876:8,8:8-8,8-8:3,2,0,0:8,3:NULL:29.0822:326.675,113.385:0.0,0.0:3.84704e-09,0.321237,0.678776
+chr1	9012172	.	TATATATATATATATATATA	.	.	.	END=9012191;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.886758:10,10:9-10,9-10:7,6,0,0:10,7:NULL:84.391:326.675,113.385:0.398507,0.398507:3.0459e-08,0.0742848,0.925809
+chr1	9015094	.	AAAGAAAGAAAG	.	.	.	END=9015105;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99985:3,3:3-3,3-3:16,19,0,0:3,16:NULL:229.756:326.675,113.385:0.0,0.0:0.0,0.000113049,0.999888
+chr1	9015582	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9015617;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.840554:18,18:11-18,11-18:10,15,0,15:17,2|18,8:5,3|8,1|10,1|12,2|13,2|15,3|16,1|17,1|18,1:307.155:326.675,113.385:2.7477,2.7477:7.32886e-17,0.147725,0.852355
+chr1	9020212	.	GAATGAATGAATGAATGAATGAAT	.	.	.	END=9020235;RU=gaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999425:6,6:6-6,6-6:15,8,0,0:6,15:NULL:135.366:326.675,113.385:0.0,0.0:1.88457e-16,0.000431303,0.999569
+chr1	9021852	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9021905;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0477433:26,26:26-27,26-27:0,7,0,11:NULL:8,1|10,1|12,1|13,1|14,1|15,1|16,1|24,2|26,2:156.553:326.675,113.385:0.534653,0.534653:0.0916676,0.439076,0.469425
+chr1	9022665	.	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=9022689;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,6,0,4:5,26:2,1|3,2|4,1:189.236:326.675,113.385:0.0,0.0:0.0,6.84067e-08,1.0
+chr1	9025967	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9026010;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.84528:22,22:8-23,8-23:7,8,0,11:22,7:5,1|7,1|8,1|9,1|11,1|13,1|14,1|18,2|19,2:191.718:326.675,113.385:4.31912,4.31912:4.1625e-08,0.0753746,0.924719
+chr1	9027019	.	TTTATTTATTTA	.	.	.	END=9027030;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985866:3,3:3-3,3-3:9,6,0,2:3,9:2,2:101.237:326.675,113.385:0.0,0.0:1.1158e-20,0.00535034,0.994663
+chr1	9029369	.	ATATATATATAT	.	.	.	END=9029380;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994092:6,6:4-7,4-7:19,10,0,0:6,17|7,2:NULL:171.876:326.675,113.385:0.397522,0.397522:1.02527e-22,4.64167e-05,0.999956
+chr1	9029380	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9029417;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977209:19,19:17-20,17-20:18,16,0,11:19,16|20,2:5,2|9,2|10,1|13,1|16,1|17,1|18,2|19,1:315.247:326.675,113.385:0.483833,0.483833:1.89571e-33,1.92268e-05,0.99998
+chr1	9029844	.	CAACAACAACAACAA	.	.	.	END=9029858;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,13,0,4:5,23:3,1|4,3:240.983:326.675,113.385:0.0,0.0:0.0,3.9763e-07,1.0
+chr1	9036620	.	TTGCTTGCTTGC	.	.	.	END=9036631;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:3,3:3-3,3-3:18,11,0,2:3,18:2,2:189.103:326.675,113.385:0.0,0.0:0.0,1.8714e-05,0.999985
+chr1	9037227	.	TTGTTTGTTTGT	.	.	.	END=9037238;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999784:3,3:3-3,3-3:15,8,0,2:3,15:2,2:141.515:326.675,113.385:0.0,0.0:0.0,9.43857e-05,0.999909
+chr1	9044406	.	TATATATATATA	.	.	.	END=9044417;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.957473:6,6:6-6,6-6:9,15,0,0:6,9:NULL:171.372:326.675,113.385:0.0,0.0:1.20608e-19,0.0299865,0.970067
+chr1	9044826	.	CTTTTCTTTTCTTTTCTTTT	.	.	.	END=9044845;RU=ctttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,9,0,2:4,19:3,2:174.322:326.675,113.385:0.0,0.0:0.0,1.1877e-05,0.999987
+chr1	9051415	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9051434;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:30,10,0,0:5,30:NULL:213.903:326.675,113.385:0.0,0.0:0.0,7.71664e-09,1.0
+chr1	9052040	.	ATATATATATATAT	.	.	.	END=9052053;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.974584:7,7:7-7,7-7:9,5,0,0:7,9:NULL:79.1573:326.675,113.385:0.0,0.0:2.30478e-15,0.0141506,0.985881
+chr1	9054350	.	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	.	.	.	END=9054388;RU=gtg;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.97978:13,13:12-13,12-13:17,17,0,9:12,2|13,15:3,2|4,2|5,1|6,1|8,1|9,2:304.92:326.675,113.385:0.334882,0.334882:9.55963e-30,0.0202098,0.979833
+chr1	9055550	.	GAGAGAGAGAGA	.	.	.	END=9055561;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999908:6,6:6-6,6-6:17,6,0,0:6,17:NULL:124.175:326.675,113.385:0.0,0.0:2.18165e-37,5.48361e-05,0.999948
+chr1	9057035	.	ACACACACACACACACACACACACACACACACACAC	.	.	.	END=9057070;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.897055:18,18:17-18,17-18:12,10,0,14:17,3|18,9:5,2|7,1|8,1|9,1|10,2|11,1|13,2|14,1|15,1|16,1|17,1:260.454:326.675,113.385:0.345543,0.345543:3.99221e-10,0.0980294,0.902074
+chr1	9065820	.	ACCCACCCACCC	.	.	.	END=9065831;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977326:3,3:3-3,3-3:9,21,0,0:3,9:NULL:225.439:326.675,113.385:0.0,0.0:8.67199e-27,0.0162112,0.983822
+chr1	9066850	.	TTGTTGTTGTTG	.	.	.	END=9066861;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99999:4,4:4-4,4-4:18,13,0,3:4,18:3,3:216.888:326.675,113.385:0.0,0.0:0.0,1.61757e-05,0.999986
+chr1	9077038	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=9077077;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.992087:19,20:19-22,20-20:15,9,0,16:19,7|20,8:4,2|5,2|10,2|11,1|13,1|14,2|16,2|17,1|18,2|19,1:283.071:326.675,113.385:0.914864,0.19802:3.63782e-08,0.992064,0.0079529
+chr1	9080272	.	AAAGGAAAAGGAAAAGGA	.	.	.	END=9080289;RU=aaagga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:167.245:326.675,113.385:0.0,0.0:0.0,1.10308e-07,1.0
+chr1	9093163	.	CAACAACAACAA	.	.	.	END=9093174;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,7,0,2:4,23:3,2:169.731:326.675,113.385:0.0,0.0:0.0,4.45989e-07,1.0
+chr1	9101067	.	TAAATAAATAAA	.	.	.	END=9101078;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:202.305:326.675,113.385:0.0,0.0:0.0,1.23536e-05,0.999987
+chr1	9101909	.	GATGGATGGATGGATGGATGGATGGATGGATGGATGGATG	.	.	.	END=9101948;RU=gatg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999347:10,10:6-10,6-10:14,12,0,10:10,14:4,3|5,2|6,1|8,2|9,2:243.867:326.675,113.385:1.80969,1.80969:3.52163e-38,0.00031278,0.999689
+chr1	9101975	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	.	END=9102022;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999885:12,12:12-12,12-12:17,13,0,12:12,17:2,1|3,1|4,2|5,1|6,1|7,2|8,2|11,2:282.169:326.675,113.385:0.139319,0.139319:1.82656e-35,6.6536e-05,0.999934
+chr1	9103931	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9103958;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9842:14,14:12-14,12-14:10,10,0,12:14,10:4,1|5,4|6,4|9,1|11,1|13,1:235.664:326.675,113.385:0.765392,0.765392:4.05923e-13,0.0066438,0.99337
+chr1	9104117	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=9104156;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:8,8:8-8,8-8:17,14,0,6:8,17:3,3|4,2|6,1:241.36:326.675,113.385:0.0,0.0:0.0,6.51563e-05,0.999934
+chr1	9108162	.	AATCAATCAATCAATC	.	.	.	END=9108177;RU=aatc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,14,0,5:4,22:2,1|3,4:248.72:326.675,113.385:0.0,0.0:0.0,9.11744e-07,1.0
+chr1	9118041	.	TTTATTTATTTA	.	.	.	END=9118052;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,2,0,2:3,19:2,2:106.128:326.675,113.385:0.0,0.0:0.0,5.02187e-06,0.999995
+chr1	9118141	.	CCCACCCACCCACCCACCCACCCA	.	.	.	END=9118164;RU=ccca;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.969243:6,6:6-6,6-6:8,4,0,7:6,8:2,1|3,3|5,3:117.826:326.675,113.385:0.0,0.0:7.17771e-23,0.0105606,0.989462
+chr1	9127223	.	TATATATATATATATA	.	.	.	END=9127238;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.66523:8,8:8-8,8-8:5,17,0,0:8,5:NULL:181.379:326.675,113.385:0.0,0.0:3.98815e-07,0.190437,0.809619
+chr1	9130256	.	CATCATCATCATCAT	.	.	.	END=9130270;RU=cat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,14,0,4:5,25:3,1|4,3:257.681:326.675,113.385:0.0,0.0:0.0,6.90025e-08,1.0
+chr1	9131824	.	TAAATAAATAAA	.	.	.	END=9131835;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.923:326.675,113.385:0.0,0.0:0.0,3.12728e-06,1.0
+chr1	9133465	.	AAGCAAGCAAGC	.	.	.	END=9133476;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999907:3,3:3-3,3-3:17,15,0,0:3,17:NULL:200.299:326.675,113.385:0.0,0.0:0.0,6.32466e-05,0.99994
+chr1	9142553	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=9142586;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.325667:17,17:16-20,16-20:25,6,0,8:16,6|17,19:5,1|6,1|7,1|10,1|11,1|12,1|15,1|20,1:259.707:326.675,113.385:1.49914,1.49914:9.32892e-22,0.0031623,0.996845
+chr1	9143268	.	AATAAATAAATA	.	.	.	END=9143279;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,17,0,4:3,19:2,4:255.414:326.675,113.385:0.0,0.0:0.0,6.32514e-06,0.999994
+chr1	9154316	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9154355;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.272305:20,37:20-20,19-39:15,8,0,11:19,2|20,13:7,1|10,2|12,2|14,1|15,1|17,1|19,2|36,1:242.669:326.675,113.385:0.0990099,8.55464:2.43813e-16,1.05788e-05,0.999993
+chr1	9155619	.	ATAAATAAATAA	.	.	.	END=9155630;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:138.642:326.675,113.385:0.0,0.0:0.0,4.30834e-06,0.999995
+chr1	9156170	.	TTTGTTTGTTTG	.	.	.	END=9156181;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:175.6:326.675,113.385:0.0,0.0:0.0,4.95853e-06,0.999995
+chr1	9156695	.	GATGATGATGATGATGAT	.	.	.	END=9156712;RU=gat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999722:6,6:6-6,6-6:15,16,0,5:6,15:3,1|4,2|5,2:250.053:326.675,113.385:0.0,0.0:4.94222e-37,0.000153961,0.999849
+chr1	9157471	.	TGGTTGGTTGGTTGGTTGGTTGGT	.	.	.	END=9157494;RU=tggt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999594:6,6:5-6,5-6:14,19,0,7:6,14:3,1|4,5|5,1:286.031:326.675,113.385:0.334882,0.334882:0.0,0.000298026,0.999705
+chr1	9158960	.	AACAACAACAACAAC	.	.	.	END=9158974;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:19,6,0,2:5,19:4,2:146.829:326.675,113.385:0.0,0.0:0.0,7.46421e-06,0.999994
+chr1	9164239	.	CAACAACAACAA	.	.	.	END=9164250;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:226.222:326.675,113.385:0.0,0.0:0.0,5.94517e-07,1.0
+chr1	9167899	.	AACAAAAACAAAAACAAA	.	.	.	END=9167916;RU=aacaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997682:3,3:3-3,3-3:12,6,0,0:3,12:NULL:107.052:326.675,113.385:0.0,0.0:4.81654e-40,0.00123496,0.99877
+chr1	9168809	.	TGGTGGTGGTGG	.	.	.	END=9168820;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,16,0,2:4,21:3,2:240.021:326.675,113.385:0.0,0.0:0.0,1.95118e-06,1.0
+chr1	9174269	.	AAAATAAAATAAAAT	.	.	.	END=9174283;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999924:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.148:326.675,113.385:0.0,0.0:0.0,4.24173e-05,0.999957
+chr1	9185149	.	AAATAAATAAAT	.	.	.	END=9185160;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:200.239:326.675,113.385:0.0,0.0:0.0,3.84078e-08,1.0
+chr1	9190774	.	TGTTTGTTTGTT	.	.	.	END=9190785;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:18,7,0,3:3,18:2,3:155.211:326.675,113.385:0.0,0.0:0.0,1.06511e-05,0.999993
+chr1	9192850	.	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	.	.	END=9192944;RU=aaagg;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.634562:17,17:9-17,9-17:4,14,0,17:17,4:2,1|5,1|6,2|8,1|9,2|11,1|13,3|14,1|15,3|16,2:270.043:326.675,113.385:3.99824,3.99824:0.88729,0.11281,2.86131e-10
+chr1	9198920	.	ATCCATCCATCC	.	.	.	END=9198931;RU=atcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:247.93:326.675,113.385:0.0,0.0:0.0,1.34858e-07,1.0
+chr1	9200129	.	TTTATTTATTTA	.	.	.	END=9200140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,6,0,2:3,36:2,2:212.001:326.675,113.385:0.0,0.0:0.0,4.11194e-11,1.0
+chr1	9201395	.	TATATATATATATATATATATATATATATATATATATATA	.	.	.	END=9201434;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.134691:20,20:19-22,19-22:2,4,0,0:20,2:NULL:51.6454:326.675,113.385:0.765776,0.765776:0.00662868,0.410622,0.58284
+chr1	9203282	.	AGTCAGTCAGTC	.	.	.	END=9203293;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,15,0,5:3,20:2,5:257.356:326.675,113.385:0.0,0.0:0.0,3.54959e-06,1.0
+chr1	9204564	.	TCATCATCATCA	.	.	.	END=9204575;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:4,4:4-4,4-4:18,8,0,5:4,18:3,5:181.185:326.675,113.385:0.0,0.0:0.0,8.05792e-06,0.999994
+chr1	9211529	.	CAAAACAAAACAAAA	.	.	.	END=9211543;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999935:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.809:326.675,113.385:0.0,0.0:0.0,4.89388e-05,0.999955
+chr1	9211779	.	ACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9211816;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.814705:19,19:18-20,18-20:6,12,0,9:19,6:6,1|7,2|14,1|15,1|16,2|18,2:206.507:326.675,113.385:0.55233,0.55233:1.1296e-08,0.0586354,0.941447
+chr1	9216945	.	GAGGGAGGGAGG	.	.	.	END=9216956;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:193.378:326.675,113.385:0.0,0.0:0.0,3.34687e-06,1.0
+chr1	9218068	.	AATTAATTAATT	.	.	.	END=9218079;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999921:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.889:326.675,113.385:0.0,0.0:0.0,4.7444e-05,0.999955
+chr1	9225255	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	.	END=9225306;RU=gaaa;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.838936:13,13:5-13,5-13:6,14,0,12:13,6:2,1|3,1|4,2|6,1|8,1|9,1|10,3|11,1|12,1:248.732:326.675,113.385:4.05346,4.05346:4.40474e-13,0.112307,0.88779
+chr1	9226135	.	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9226188;RU=ata;PERIOD=3;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.990369:17,18:16-18,16-18:7,5,0,9:17,3|18,4:4,1|5,1|7,3|8,1|9,1|14,1|16,1:147.675:326.675,113.385:0.480988,0.363786:6.80332e-05,0.991309,0.00864358
+chr1	9227593	.	TGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9227613;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996976:7,7:6-7,6-7:12,3,0,2:7,12:5,1|6,1:91.0383:326.675,113.385:0.236383,0.236383:7.79232e-22,0.00126966,0.998733
+chr1	9227617	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=9227655;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.945038:13,13:12-13,12-13:8,7,0,8:13,8:3,3|5,1|6,2|7,1|11,1:156.105:326.675,113.385:0.298675,0.298675:1.16214e-12,0.0303655,0.969693
+chr1	9229745	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9229764;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,11,0,3:5,21:3,1|4,2:208.109:326.675,113.385:0.0,0.0:0.0,2.10188e-06,1.0
+chr1	9235751	.	TCTGATGTCTGTGTTCTGATGTCTGTGTTCTGATGTCTGTGT	.	.	.	END=9235792;RU=tctgatgtctgtgt;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.801702:3,3:1-3,1-3:8,18,0,0:3,8:NULL:202.589:326.675,113.385:0.569802,0.569802:1.96275e-09,0.194535,0.805516
+chr1	9247060	.	GGGTGGGTGGGT	.	.	.	END=9247071;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959299:3,3:3-3,3-3:8,15,0,0:3,8:NULL:165.037:326.675,113.385:0.0,0.0:1.89467e-24,0.0252493,0.9748
+chr1	9251161	.	AAATAAATAAAT	.	.	.	END=9251172;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999524:3,3:3-3,3-3:14,12,0,0:3,14:NULL:160.371:326.675,113.385:0.0,0.0:1e-45,0.000271586,0.999729
+chr1	9252401	.	AGAGAGAGAGAG	.	.	.	END=9252412;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,13,0,0:6,24:NULL:213.251:326.675,113.385:0.0,0.0:0.0,5.19551e-07,1.0
+chr1	9253812	.	TAAATAAATAAA	.	.	.	END=9253823;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,4,0,0:3,24:NULL:130.617:326.675,113.385:0.0,0.0:0.0,2.63531e-07,1.0
+chr1	9257431	.	AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAG	.	.	.	END=9257472;RU=agacag;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999974:7,7:7-7,7-7:18,16,0,10:7,18:4,6|6,4:297.01:326.675,113.385:0.0,0.0:0.0,2.37702e-05,0.999979
+chr1	9258341	.	CTTCCTTCCTTCCTTC	.	.	.	END=9258356;RU=cttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,22,0,0:4,25:NULL:303.27:326.675,113.385:0.0,0.0:0.0,5.21673e-07,1.0
+chr1	9260912	.	AAGAAAAGAAAAGAA	.	.	.	END=9260926;RU=aagaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,4,0,0:3,25:NULL:137.727:326.675,113.385:0.0,0.0:0.0,1.41967e-07,1.0
+chr1	9273522	.	TTGATTGATTGATTGATTGATTGATTGA	.	.	.	END=9273549;RU=ttga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:34,21,0,7:7,34:2,2|3,3|5,1|6,1:399.62:326.675,113.385:0.0,0.0:0.0,1.36727e-09,1.0
+chr1	9274125	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9274170;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.956737:22,23:19-23,23-23:15,14,0,14:21,2|22,5|23,8:5,1|8,2|9,2|10,1|12,1|13,1|16,5|21,1:320.63:326.675,113.385:0.899847,0.39604:5.11288e-07,0.96099,0.0390799
+chr1	9277902	.	ATATATATATATATAT	.	.	.	END=9277917;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999429:8,8:8-8,8-8:15,5,0,0:8,15:NULL:105.87:326.675,113.385:0.0,0.0:8.80438e-21,0.000358104,0.999644
+chr1	9279853	.	ATACATACATACATAC	.	.	.	END=9279868;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,12,0,4:4,22:2,2|3,2:224.55:326.675,113.385:0.0,0.0:0.0,8.97549e-07,1.0
+chr1	9281951	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9281994;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998108:22,22:22-22,22-22:14,11,0,18:22,14:6,1|8,1|9,3|11,2|13,1|14,1|15,2|18,1|19,2|20,2|21,2:309.278:326.675,113.385:0.0,0.0:1.38778e-17,0.000334466,0.999667
+chr1	9282129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9282164;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989568:18,18:17-18,17-18:19,12,0,8:17,4|18,15:4,1|6,1|9,1|10,1|14,1|16,1|17,1|18,1:261.136:326.675,113.385:0.290354,0.290354:1.77746e-23,0.0103277,0.989694
+chr1	9285357	.	TTTATTTATTTA	.	.	.	END=9285368;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.413:326.675,113.385:0.0,0.0:0.0,4.26591e-06,0.999995
+chr1	9286427	.	TTTTATTTTATTTTA	.	.	.	END=9286441;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989896:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.98:326.675,113.385:0.0,0.0:1.23609e-32,0.00643952,0.993578
+chr1	9289377	.	TATTTATTTATTTATTTATTTATT	.	.	.	END=9289400;RU=tatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997387:6,6:6-6,6-6:12,4,0,4:6,12:3,2|4,1|5,1:114.495:326.675,113.385:0.0,0.0:1.98832e-30,0.00113359,0.998869
+chr1	9290815	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9290852;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.655712:19,19:11-20,11-20:5,9,0,8:19,5:5,2|7,1|12,1|14,1|15,1|18,2:166.296:326.675,113.385:3.94512,3.94512:1.10631e-06,0.124407,0.875694
+chr1	9296627	.	ATTAATTAATTA	.	.	.	END=9296638;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,19,0,3:3,21:2,3:278.445:326.675,113.385:0.0,0.0:0.0,1.42207e-06,1.0
+chr1	9296985	.	AAAGAAAGAAAG	.	.	.	END=9296996;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:190.06:326.675,113.385:0.0,0.0:0.0,6.452e-07,1.0
+chr1	9301041	.	TAAATAAATAAA	.	.	.	END=9301052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999938:3,3:3-3,3-3:17,9,0,2:3,17:2,2:162.806:326.675,113.385:0.0,0.0:0.0,2.85568e-05,0.999972
+chr1	9302120	.	CACACACACACACACACACACACACACACACACACACACA	.	.	.	END=9302159;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990551:20,20:19-20,19-20:14,18,0,15:19,2|20,12:8,2|10,1|12,2|14,1|15,1|16,4|18,2|19,1|20,1:349.293:326.675,113.385:0.390054,0.390054:4.34398e-19,0.00830726,0.991711
+chr1	9302309	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9302354;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.303115:23,38:23-23,2-39:13,15,0,18:21,2|23,9|24,2:6,1|7,1|8,1|9,1|10,1|12,2|14,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|32,1|38,1:361.606:326.675,113.385:0.243733,12.4842:8.54821e-26,9.88519e-09,1.0
+chr1	9307495	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=9307558;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.997979:15,15:14-15,14-15:13,9,0,13:15,13:5,1|7,1|8,3|9,3|10,2|13,2|14,1:237.268:326.675,113.385:0.253975,0.253975:0.998922,0.00108148,1.56142e-16
+chr1	9310514	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9310563;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.298027:25,35:24-25,24-35:8,11,0,12:24,2|25,6:5,1|9,2|10,1|11,1|12,1|13,1|15,1|20,1|23,1|24,1|34,1:247.892:326.675,113.385:0.169767,4.95744:5.61813e-11,1.06178e-05,0.999993
+chr1	9314806	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9314831;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.856598:13,14:13-13,13-14:22,15,0,10:12,3|13,19:4,1|5,2|6,1|8,1|9,1|11,2|12,1|14,1:329.622:326.675,113.385:0.0,0.515422:7.72604e-23,7.13848e-06,0.999994
+chr1	9318491	.	TATATATATATATA	.	.	.	END=9318504;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998886:7,7:6-7,6-7:14,5,0,0:7,14:NULL:101.696:326.675,113.385:0.323567,0.323567:2.86529e-18,0.000686551,0.999317
+chr1	9324727	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=9324744;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996535:3,3:3-3,3-3:11,5,0,2:3,11:2,2:100.743:326.675,113.385:0.0,0.0:3.86184e-38,0.00153338,0.998473
+chr1	9326142	.	TCCCTCCCTCCC	.	.	.	END=9326153;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999349:3,3:3-3,3-3:14,20,0,0:3,14:NULL:244.48:326.675,113.385:0.0,0.0:0.0,0.000523905,0.999477
+chr1	9328079	.	AAACAAACAAAC	.	.	.	END=9328090;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:44,21,0,2:3,44:2,2:371.366:326.675,113.385:0.0,0.0:0.0,1.8272e-13,1.0
+chr1	9332135	.	TTTGTTTGTTTGTTTG	.	.	.	END=9332150;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99967:4,4:4-4,4-4:15,12,0,4:4,15:3,4:197.49:326.675,113.385:0.0,0.0:0.0,0.00013273,0.999871
+chr1	9335058	.	TTTTGTTTTGTTTTG	.	.	.	END=9335072;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:145.745:326.675,113.385:0.0,0.0:0.0,6.17845e-07,1.0
+chr1	9336951	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9336970;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.978285:4,4:3-4,3-4:9,12,0,4:4,9:3,4:176.105:326.675,113.385:0.497026,0.497026:4.14237e-29,0.0118562,0.988168
+chr1	9340284	.	TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC	.	.	.	END=9340316;RU=tgc;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992223:11,11:11-11,11-11:10,9,0,8:11,10:3,1|4,2|7,1|9,1|10,3:192.427:326.675,113.385:0.0,0.0:2.04128e-27,0.00258091,0.997427
+chr1	9346828	.	TCATCATCATCA	.	.	.	END=9346839;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:257.942:326.675,113.385:0.0,0.0:0.0,6.09121e-07,1.0
+chr1	9348812	.	TTTGTTTTGTTTTGT	.	.	.	END=9348826;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999229:3,3:3-3,3-3:14,9,0,0:3,14:NULL:141.122:326.675,113.385:0.0,0.0:0.0,0.000509649,0.999492
+chr1	9350228	.	ACAGCGACAGCGACAGCG	.	.	.	END=9350245;RU=acagcg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:276.894:326.675,113.385:0.0,0.0:0.0,2.46273e-07,1.0
+chr1	9350646	.	TTTGTTTGTTTG	.	.	.	END=9350657;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:3,3:3-3,3-3:18,9,0,2:3,18:2,2:163.919:326.675,113.385:0.0,0.0:0.0,9.79155e-06,0.999993
+chr1	9352617	.	TTTGTTTGTTTG	.	.	.	END=9352628;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,15,0,0:3,39:NULL:292.504:326.675,113.385:0.0,0.0:0.0,1.07657e-11,1.0
+chr1	9360153	.	TTGTTTGTTTGT	.	.	.	END=9360164;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:198.994:326.675,113.385:0.0,0.0:0.0,5.31601e-07,1.0
+chr1	9366180	.	TCCCTCCCTCCCTCCC	.	.	.	END=9366195;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,4,0,0:4,21:NULL:122.492:326.675,113.385:0.0,0.0:0.0,3.79849e-06,1.0
+chr1	9384508	.	TGTGTGTGTGTG	.	.	.	END=9384519;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.628284:6,6:5-6,5-6:20,6,0,0:5,4|6,16:NULL:150.794:326.675,113.385:0.44763,0.44763:7.92581e-13,0.371769,0.62828
+chr1	9384520	.	TATATATATATATATATA	.	.	.	END=9384537;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.815459:9,9:8-9,8-9:16,6,0,0:8,3|9,13:NULL:131.98:326.675,113.385:0.425627,0.425627:3.99286e-13,0.184457,0.815606
+chr1	9392580	.	CACACACACACACACA	.	.	.	END=9392595;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:32,12,0,3:8,32:5,2|6,1:259.698:326.675,113.385:0.0,0.0:0.0,1.69574e-09,1.0
+chr1	9394954	.	TTTCTTTTCTTTTCT	.	.	.	END=9394968;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999975:3,3:3-3,3-3:18,12,0,0:3,18:NULL:178.442:326.675,113.385:0.0,0.0:0.0,3.36197e-05,0.99997
+chr1	9397849	.	TCTCTCTCTCTC	.	.	.	END=9397860;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,15,0,0:6,24:NULL:235.651:326.675,113.385:0.0990099,0.0990099:0.0,9.29089e-07,1.0
+chr1	9400767	.	GAGGGAGGGAGG	.	.	.	END=9400778;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,15,0,2:3,21:2,2:237.819:326.675,113.385:0.0,0.0:0.0,1.35646e-06,1.0
+chr1	9407672	.	ATATATATATATATAT	.	.	.	END=9407687;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986192:8,8:8-9,8-9:10,8,0,0:8,10:NULL:115.125:326.675,113.385:0.345543,0.345543:1.81266e-16,0.00695297,0.993062
+chr1	9413992	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9414011;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999055:5,5:5-5,5-5:13,16,0,7:5,13:2,1|3,3|4,3:248.56:326.675,113.385:0.0,0.0:5.94545e-39,0.000475321,0.999529
+chr1	9418611	.	TTCTTTCTTTCT	.	.	.	END=9418622;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,11,0,0:3,26:NULL:199.853:326.675,113.385:0.0,0.0:0.0,9.92493e-08,1.0
+chr1	9420278	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=9420321;RU=tgtt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:11,11:11-15,11-15:29,15,0,7:11,29:3,3|5,2|9,1|10,1:313.405:326.675,113.385:1.08025,1.08025:0.0,1.55196e-08,1.0
+chr1	9422121	.	AATAAATAAATA	.	.	.	END=9422132;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998933:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.022:326.675,113.385:0.0,0.0:2.4053e-41,0.000576164,0.999424
+chr1	9424740	.	TCTCTTCTCTTCTCT	.	.	.	END=9424754;RU=tctct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997447:3,3:3-3,3-3:12,8,0,0:3,12:NULL:121.749:326.675,113.385:0.0,0.0:3.67533e-40,0.00153279,0.998473
+chr1	9431832	.	AAACCAAAACCAAAACCA	.	.	.	END=9431849;RU=aaacca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,6,0,0:3,19:NULL:134.242:326.675,113.385:0.0,0.0:0.0,1.72612e-05,0.999986
+chr1	9435914	.	ACAGAGACAGAGACAGAGACAGAG	.	.	.	END=9435937;RU=acagag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999746:4,4:3-4,3-4:15,8,0,3:4,15:2,2|3,1:155.267:326.675,113.385:0.374147,0.374147:7e-45,0.00014349,0.999857
+chr1	9438550	.	AAATCAAATCAAATC	.	.	.	END=9438564;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:208.921:326.675,113.385:0.0,0.0:0.0,4.69581e-06,0.999995
+chr1	9440244	.	CCACCACCACCACCACCA	.	.	.	END=9440261;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,7,0,2:6,22:5,2:161.055:326.675,113.385:0.0,0.0:0.0,8.65582e-07,1.0
+chr1	9440854	.	TTATTATTATTATTA	.	.	.	END=9440868;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981375:5,5:5-5,5-5:9,4,0,2:5,9:4,2:90.8043:326.675,113.385:0.0,0.0:8.55695e-23,0.00799974,0.992018
+chr1	9442366	.	TCTCTCTCTCTCTC	.	.	.	END=9442379;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990911:7,7:6-8,6-8:11,21,0,0:7,11:NULL:231.834:326.675,113.385:0.446534,0.446534:6.00934e-24,0.00629505,0.993721
+chr1	9443711	.	ATACATACATACATAC	.	.	.	END=9443726;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993713:4,4:4-4,4-4:11,4,0,0:4,11:NULL:78.9:326.675,113.385:0.0,0.0:1.21939e-30,0.00338957,0.996618
+chr1	9444202	.	ACCCACCCACCC	.	.	.	END=9444213;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991091:3,3:3-3,3-3:10,16,0,0:3,10:NULL:189.381:326.675,113.385:0.0,0.0:1.7653e-30,0.0063046,0.993708
+chr1	9450506	.	GGGTGGGTGGGT	.	.	.	END=9450517;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999917:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.376:326.675,113.385:0.0,0.0:0.0,5.0317e-05,0.999949
+chr1	9452272	.	AAAACAAAACAAAAC	.	.	.	END=9452286;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,9,0,3:3,25:2,3:202.435:326.675,113.385:0.0,0.0:0.0,8.19423e-08,1.0
+chr1	9459770	.	TCTCTCTCTCTC	.	.	.	END=9459781;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998424:6,6:6-7,6-7:13,7,0,0:6,13:NULL:113.472:326.675,113.385:0.345543,0.345543:2.92193e-30,0.000800413,0.999203
+chr1	9461244	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	.	END=9461298;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988769:11,11:6-11,6-11:10,16,0,19:11,10:3,2|4,2|5,3|6,3|7,5|8,1|9,2|10,1:326.85:326.675,113.385:2.23815,2.23815:4.06269e-27,0.00860565,0.991413
+chr1	9462516	.	ATATATATATATATATATATATATAT	.	.	.	END=9462541;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.79068:13,13:11-14,11-14:7,3,0,0:13,7:NULL:60.1106:326.675,113.385:0.783743,0.783743:1.10101e-07,0.0955401,0.904565
+chr1	9463887	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=9463930;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.738784:22,22:21-22,21-22:5,10,0,12:22,5:4,1|5,2|8,1|9,1|11,1|13,1|16,1|17,1|21,3:208.298:326.675,113.385:0.270063,0.270063:6.73055e-07,0.0717911,0.928307
+chr1	9468830	.	GAGGGAGGGAGG	.	.	.	END=9468841;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:196.84:326.675,113.385:0.0,0.0:0.0,4.90263e-07,1.0
+chr1	9470692	.	CACACACACACA	.	.	.	END=9470703;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,11,0,5:6,25:4,3|5,2:239.921:326.675,113.385:0.0,0.0:0.0,1.09519e-07,1.0
+chr1	9471535	.	GAGAGGAGAGGAGAG	.	.	.	END=9471549;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.475982:3,3:3-3,3-3:3,3,0,0:3,3:NULL:40.6212:326.675,113.385:0.281439,0.281439:2.60341e-10,0.221156,0.778882
+chr1	9472682	.	ATGAATGAATGA	.	.	.	END=9472693;RU=atga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997079:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.437:326.675,113.385:0.0,0.0:7.52693e-33,0.00197559,0.998033
+chr1	9472967	.	TGTGTGTGTGTGTG	.	.	.	END=9472980;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999708:7,7:7-7,7-7:15,5,0,2:7,15:6,2:120.874:326.675,113.385:0.0,0.0:2.76285e-31,0.000108582,0.999894
+chr1	9474757	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=9474784;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999638:14,14:13-14,13-14:20,20,0,9:12,2|14,18:5,1|7,1|10,3|13,4:347.548:326.675,113.385:0.294378,0.294378:9.25131e-27,0.000345403,0.999658
+chr1	9475821	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9475866;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.415505:23,23:21-23,21-23:6,9,0,16:22,2|23,4:5,1|7,1|8,1|9,2|10,1|11,2|14,2|16,1|17,1|18,1|19,1|20,2:246.597:326.675,113.385:0.716027,0.716027:0.000398632,0.510801,0.488861
+chr1	9476189	.	GCAGGCAGGCAG	.	.	.	END=9476200;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,13,0,2:3,19:2,2:208.939:326.675,113.385:0.0,0.0:0.0,6.78018e-06,0.999994
+chr1	9482508	.	AATTAATTAATTAATTAATT	.	.	.	END=9482527;RU=aatt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990887:5,5:5-5,5-5:10,8,0,0:5,10:NULL:112.505:326.675,113.385:0.0,0.0:1.32822e-28,0.00598998,0.994023
+chr1	9482533	.	AAAGAAAGAAAG	.	.	.	END=9482544;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999906:3,3:3-3,3-3:16,11,0,0:3,16:NULL:162.705:326.675,113.385:0.0,0.0:0.0,5.78138e-05,0.999942
+chr1	9491448	.	AAATAAATAAATAAAT	.	.	.	END=9491463;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987186:4,4:4-4,4-4:10,1,0,0:4,10:NULL:50.208:326.675,113.385:0.0,0.0:6.382e-32,0.00633264,0.993684
+chr1	9496534	.	GAGGGAGGGAGG	.	.	.	END=9496545;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,7,0,0:3,28:NULL:174.907:326.675,113.385:0.0,0.0:0.0,2.73175e-08,1.0
+chr1	9497089	.	ACCAACCAACCA	.	.	.	END=9497100;RU=acca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:222.338:326.675,113.385:0.0,0.0:0.0,1.24897e-06,1.0
+chr1	9497489	.	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=9497533;RU=att;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.875025:15,15:15-15,15-15:6,9,0,8:15,6:4,1|6,2|8,1|10,1|11,1|13,1|14,1:168.58:326.675,113.385:0.29703,0.29703:1.54199e-10,0.051828,0.948252
+chr1	9497958	.	TTTGTTTGTTTG	.	.	.	END=9497969;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:157.936:326.675,113.385:0.0,0.0:0.0,6.28813e-08,1.0
+chr1	9502657	.	ACACACACACAC	.	.	.	END=9502668;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999982:6,6:6-6,6-6:18,4,0,2:6,18:4,1|5,1:123.674:326.675,113.385:0.0,0.0:2.646e-42,2.0149e-05,0.99998
+chr1	9504503	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=9504522;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999891:4,4:4-4,4-4:17,5,0,0:4,17:NULL:115.806:326.675,113.385:0.0,0.0:0.0,7.52509e-05,0.999926
+chr1	9508248	.	CAAACAAACAAA	.	.	.	END=9508259;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9997:3,3:3-3,3-3:15,20,0,0:3,15:NULL:240.187:326.675,113.385:0.0,0.0:0.0,0.000252808,0.99975
+chr1	9508516	.	ATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	.	END=9508554;RU=ata;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.91691:13,13:13-14,13-14:8,15,0,9:13,8:3,1|4,3|5,1|7,1|8,2|10,1:246.436:326.675,113.385:0.374147,0.374147:5.2725e-12,0.0673377,0.932756
+chr1	9508833	.	CACACACACACACACACA	.	.	.	END=9508850;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999883:9,9:9-11,9-11:17,7,0,2:9,17:5,1|8,1:149.286:326.675,113.385:0.691086,0.691086:8.54708e-30,4.60868e-05,0.999956
+chr1	9511167	.	TTATTTATTTAT	.	.	.	END=9511178;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:258.692:326.675,113.385:0.0,0.0:0.0,5.52396e-07,1.0
+chr1	9514249	.	TGGATGGATGGATGGA	.	.	.	END=9514264;RU=tgga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:178.978:326.675,113.385:0.0,0.0:0.0,3.8318e-05,0.999963
+chr1	9516045	.	AAAGAAAGAAAG	.	.	.	END=9516056;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999451:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.773:326.675,113.385:0.0,0.0:0.0,0.000288093,0.999713
+chr1	9516633	.	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	.	.	END=9516692;RU=gggag;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.00037075:8,8:8-8,8-8:0,1,0,0:NULL:NULL:8.16001:326.675,113.385:0.0,0.0:0.0410663,0.409397,0.549689
+chr1	9517848	.	ATTTATTTATTT	.	.	.	END=9517859;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98931:3,3:3-3,3-3:11,15,0,0:3,11:NULL:186.743:326.675,113.385:0.19802,0.19802:5.67931e-35,0.00761143,0.992408
+chr1	9522426	.	TTTGTTTGTTTG	.	.	.	END=9522437;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:216.985:326.675,113.385:0.0,0.0:0.0,1.61937e-07,1.0
+chr1	9525101	.	CACACACACACACACACA	.	.	.	END=9525118;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998546:9,9:9-9,9-9:13,12,0,3:9,13:4,2|8,1:190.377:326.675,113.385:0.0,0.0:6.30261e-22,0.000801553,0.999202
+chr1	9525246	.	ATGAATGAATGAATGAATGAATGA	.	.	.	END=9525269;RU=atga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:6,6:5-6,5-6:16,14,0,3:6,16:3,1|5,2:213.876:326.675,113.385:0.345543,0.345543:1e-45,0.000123183,0.999879
+chr1	9525501	.	AAACAAACAAACAAAC	.	.	.	END=9525516;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999956:4,4:4-4,4-4:17,10,0,5:4,17:2,1|3,4:196.242:326.675,113.385:0.0,0.0:0.0,2.47553e-05,0.999978
+chr1	9525744	.	GAGGAGGAGGAG	.	.	.	END=9525755;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999892:4,4:4-4,4-4:16,17,0,2:4,16:3,2:236.803:326.675,113.385:0.0,0.0:0.0,6.3783e-05,0.99994
+chr1	9526193	.	AAACAAACAAACAAAC	.	.	.	END=9526208;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991715:4,4:4-4,4-4:11,11,0,0:4,11:NULL:144.452:326.675,113.385:0.0,0.0:3.33123e-34,0.00610614,0.99391
+chr1	9526390	.	AAATAAATAAAT	.	.	.	END=9526401;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999751:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.747:326.675,113.385:0.0,0.0:0.0,0.000140297,0.999864
+chr1	9529332	.	ACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9529373;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.68762:21,21:20-21,20-21:8,14,0,13:20,2|21,6:8,2|10,3|11,1|12,2|13,1|15,2|18,1|20,1:277.011:326.675,113.385:0.382696,0.382696:1.44107e-06,0.28187,0.718132
+chr1	9533361	.	AGAGAGAGAGAG	.	.	.	END=9533372;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:193.621:326.675,113.385:0.0,0.0:0.0,8.066e-06,0.999994
+chr1	9533849	.	AAATAAATAAAT	.	.	.	END=9533860;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994368:3,3:3-3,3-3:11,6,0,0:3,11:NULL:102.525:326.675,113.385:0.0,0.0:1.5121e-35,0.00279059,0.997216
+chr1	9536352	.	CCCACCCACCCA	.	.	.	END=9536363;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999949:3,3:3-3,3-3:17,15,0,0:3,17:NULL:211.421:326.675,113.385:0.0,0.0:0.0,4.53939e-05,0.999956
+chr1	9536489	.	TGGAGCTGGAGCTGGAGC	.	.	.	END=9536506;RU=tggagc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,4,0,2:3,23:2,2:141.472:326.675,113.385:0.0,0.0:0.0,3.16403e-07,1.0
+chr1	9541751	.	TATATTATATTATAT	.	.	.	END=9541765;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999729:3,3:3-3,3-3:15,3,0,0:3,15:NULL:84.3241:326.675,113.385:0.0,0.0:1e-45,0.000132508,0.999871
+chr1	9542204	.	TATTTATTTATTTATT	.	.	.	END=9542219;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999828:4,4:4-4,4-4:16,12,0,2:4,16:3,2:187.136:326.675,113.385:0.0,0.0:3e-45,0.000103024,0.999896
+chr1	9544492	.	AAACAAACAAAC	.	.	.	END=9544503;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999936:3,3:3-3,3-3:17,12,0,0:3,17:NULL:171.869:326.675,113.385:0.0,0.0:0.0,4.52417e-05,0.999956
+chr1	9544579	.	AAATAAATAAAT	.	.	.	END=9544590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.482:326.675,113.385:0.0,0.0:0.0,4.78866e-07,1.0
+chr1	9544631	.	CAAACAAACAAACAAACAAA	.	.	.	END=9544650;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999989:5,5:5-5,5-5:17,8,0,5:5,17:3,1|4,4:180.185:326.675,113.385:0.0,0.0:4e-45,1.66117e-05,0.999986
+chr1	9550027	.	AGGCAGGCTGAGGCAGGCTGAGGCAGGCTG	.	.	.	END=9550056;RU=aggcaggctg;PERIOD=10;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991697:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.68:326.675,113.385:0.0,0.0:3.84619e-14,0.00708497,0.992933
+chr1	9551002	.	TGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9551022;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:30,12,0,4:7,30:3,1|4,1|5,1|6,1:257.203:326.675,113.385:0.0,0.0:0.0,4.08431e-09,1.0
+chr1	9551523	.	GAAAGAAAGAAA	.	.	.	END=9551534;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.768:326.675,113.385:0.0,0.0:0.0,1.69865e-06,1.0
+chr1	9553997	.	ACAGACAGACAG	.	.	.	END=9554008;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999424:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.558:326.675,113.385:0.0,0.0:0.0,0.000310663,0.99969
+chr1	9555100	.	CATACATACATACATA	.	.	.	END=9555115;RU=cata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,11,0,4:4,28:3,4:240.061:326.675,113.385:0.0,0.0:0.0,7.57256e-09,1.0
+chr1	9557814	.	AGGCAGGCAGGC	.	.	.	END=9557825;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,19,0,2:3,28:2,2:303.728:326.675,113.385:0.0,0.0:0.0,2.70369e-08,1.0
+chr1	9559035	.	TTTATTTATTTA	.	.	.	END=9559046;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999997:3,3:2-3,2-3:18,8,0,2:3,18:2,2:159.677:326.675,113.385:0.253975,0.253975:0.0,9.92915e-06,0.999993
+chr1	9559216	.	CTATCTATCTAT	.	.	.	END=9559227;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99055:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.843:326.675,113.385:0.0,0.0:1.5807e-32,0.00583339,0.994181
+chr1	9559239	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=9559262;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.975961:4,4:4-4,4-4:9,12,0,3:4,9:2,2|3,1:166.59:326.675,113.385:0.0,0.0:1.77814e-26,0.0163539,0.983681
+chr1	9561161	.	AAAGAAAGAAAG	.	.	.	END=9561172;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999957:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.958:326.675,113.385:0.0,0.0:0.0,3.4985e-05,0.999964
+chr1	9567718	.	ACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9567759;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998695:21,21:18-21,18-21:16,17,0,18:21,16:4,1|5,1|7,4|8,2|9,2|10,1|11,3|12,1|13,1|16,1|19,1:371.306:326.675,113.385:0.712046,0.712046:2.3557e-18,0.000297949,0.999705
+chr1	9569212	.	GTGGTGGTGGTG	.	.	.	END=9569223;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991951:4,4:4-4,4-4:11,19,0,0:4,11:NULL:216.225:326.675,113.385:0.0,0.0:2.08963e-30,0.00592683,0.99409
+chr1	9571015	.	AAAGGAAAGGAAAGG	.	.	.	END=9571029;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.53:326.675,113.385:0.0,0.0:0.0,2.13318e-05,0.999979
+chr1	9571032	.	AAAGGAAAGGAAAGG	.	.	.	END=9571046;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999955:3,3:3-3,3-3:17,16,0,3:3,17:2,3:239.298:326.675,113.385:0.0,0.0:0.0,3.66339e-05,0.999964
+chr1	9571264	.	AGATTAGATTAGATTAGATT	.	.	.	END=9571283;RU=agatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:246.326:326.675,113.385:0.0,0.0:0.0,1.61577e-06,1.0
+chr1	9571292	.	CATACATACATA	.	.	.	END=9571303;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999841:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.408:326.675,113.385:0.0,0.0:4.61e-43,0.000103159,0.999896
+chr1	9571354	.	GATTGATTGATT	.	.	.	END=9571365;RU=gatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,12,0,2:3,18:2,2:191.128:326.675,113.385:0.0,0.0:0.0,1.34985e-05,0.999987
+chr1	9575481	.	TGGTGGTGGTGG	.	.	.	END=9575492;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,23,0,0:4,28:NULL:322.028:326.675,113.385:0.0,0.0:0.0,2.93502e-08,1.0
+chr1	9579567	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9579598;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.865572:16,16:15-16,15-16:18,7,0,8:15,5|16,13:7,2|9,1|11,1|13,2|15,1|16,1:210.355:326.675,113.385:0.442564,0.442564:1.78213e-20,0.13442,0.865673
+chr1	9579965	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9579994;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982053:15,15:14-15,14-15:15,3,0,7:14,2|15,13:6,1|10,2|11,1|13,2|14,1:151.138:326.675,113.385:0.236383,0.236383:1.49043e-14,0.0174023,0.982635
+chr1	9579994	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=9580031;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999096:19,19:19-19,19-19:15,2,0,5:19,15:15,1|16,1|17,2|18,1:125.664:326.675,113.385:0.0,0.0:2.3307e-29,0.000121848,0.99988
+chr1	9582597	.	CCTCCTCCTCCT	.	.	.	END=9582608;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999283:4,4:4-4,4-4:13,16,0,2:4,13:3,2:218.782:326.675,113.385:0.0,0.0:9.46324e-39,0.00046551,0.999537
+chr1	9583195	.	AAATAAATAAATAAAT	.	.	.	END=9583210;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999477:4,4:3-5,3-5:14,7,0,4:4,14:3,4:143.282:326.675,113.385:0.633818,0.633818:4.2e-44,0.000160403,0.999842
+chr1	9583659	.	AACCAACCAACC	.	.	.	END=9583670;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:176.01:326.675,113.385:0.0,0.0:0.0,1.07304e-06,1.0
+chr1	9585234	.	AGAGAGAGAGAG	.	.	.	END=9585245;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999978:6,6:6-7,6-7:18,12,0,0:6,18:NULL:181.935:326.675,113.385:0.236383,0.236383:4.664e-42,3.27745e-05,0.99997
+chr1	9587125	.	TAAATAAATAAA	.	.	.	END=9587136;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:204.769:326.675,113.385:0.0,0.0:0.0,4.47188e-07,1.0
+chr1	9588885	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9588932;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.776549:24,24:23-25,23-25:9,10,0,16:23,2|24,7:8,2|11,1|12,2|13,2|14,3|15,3|16,1|18,1|21,1:266.77:326.675,113.385:0.532817,0.532817:2.4315e-08,0.173489,0.826583
+chr1	9591730	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9591759;RU=tc;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.025942:12,12:12-15,12-15:0,5,0,2:NULL:6,1|8,1:58.7703:326.675,113.385:1.46059,1.46059:0.206663,0.496322,0.297103
+chr1	9591759	.	CACACACACACACACA	.	.	.	END=9591774;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930569:8,8:7-8,7-8:8,3,0,0:8,8:NULL:59.1515:326.675,113.385:0.35561,0.35561:3.91321e-11,0.0389658,0.961101
+chr1	9591774	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=9591823;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.178814:25,25:22-25,22-25:2,3,0,4:25,2:5,1|10,1|12,1|17,1:67.505:326.675,113.385:0.707349,0.707349:0.00626058,0.457123,0.53674
+chr1	9600354	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9600391;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.849525:19,20:18-19,18-20:13,6,0,12:18,2|19,8|20,3:4,2|6,2|7,1|13,1|14,2|15,1|16,2|18,1:220.619:326.675,113.385:0.169767,0.620058:1.20253e-11,0.00373575,0.996277
+chr1	9600392	.	AGAGAGAGAGAGAGAGAG	.	.	.	END=9600409;RU=ag;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:9,9:8-9,8-9:23,7,0,2:8,2|9,21:6,1|9,1:179.499:326.675,113.385:0.195027,0.195027:0.0,0.000174119,0.999827
+chr1	9601375	.	AAGAAAGAAAGAAAGAAAGA	.	.	.	END=9601394;RU=aaga;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:5,5:5-5,5-5:17,6,0,2:5,17:2,1|4,1:142.303:326.675,113.385:0.0,0.0:1.65e-43,3.54743e-05,0.999964
+chr1	9606362	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9606389;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999707:14,14:14-14,14-14:27,15,0,11:13,4|14,23:6,1|8,1|9,1|11,1|12,3|13,4:351.894:326.675,113.385:0.139319,0.139319:1.02861e-27,0.000300045,0.999704
+chr1	9608925	.	AAAACAAAACAAAACAAAAC	.	.	.	END=9608944;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999873:4,4:4-4,4-4:16,3,0,3:4,16:2,1|3,2:111.98:326.675,113.385:0.0,0.0:0.0,4.67673e-05,0.999956
+chr1	9611150	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9611195;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994831:23,23:23-24,23-24:13,10,0,15:23,13:4,1|8,1|9,1|10,1|13,1|14,1|16,2|18,2|20,4|22,1:271.859:326.675,113.385:0.344691,0.344691:1.28818e-14,0.00110153,0.9989
+chr1	9612365	.	AAACAAACAAAC	.	.	.	END=9612376;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:257.034:326.675,113.385:0.0,0.0:0.0,1.22239e-06,1.0
+chr1	9615067	.	AAGGAAAGGAAAGGA	.	.	.	END=9615081;RU=aagga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994808:3,3:3-3,3-3:11,9,0,0:3,11:NULL:125.05:326.675,113.385:0.0,0.0:8.87133e-32,0.0033707,0.99664
+chr1	9615435	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9615462;RU=tg;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988039:14,14:13-14,13-14:17,8,0,16:13,3|14,14:5,2|6,4|7,2|8,1|9,2|10,1|11,2|12,2:282.1:326.675,113.385:0.284901,0.284901:8.18095e-17,0.0116994,0.988324
+chr1	9615830	.	ACACACACACACACAC	.	.	.	END=9615845;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:25,14,0,0:8,25:NULL:232.466:326.675,113.385:0.0990099,0.0990099:2.2519e-41,6.3841e-07,1.0
+chr1	9618148	.	GTTTTGTGTTTTGTGTTTTGT	.	.	.	END=9618168;RU=gttttgt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999542:3,3:3-3,3-3:15,17,0,0:3,15:NULL:215.623:326.675,113.385:0.0,0.0:0.0,0.000414123,0.99959
+chr1	9618314	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=9618343;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.398018:15,15:6-16,6-16:7,9,0,9:14,2|15,5:4,3|5,2|6,1|7,1|12,2:195.299:326.675,113.385:4.2295,4.2295:1.62833e-05,0.564795,0.435288
+chr1	9622730	.	CCATCCATCCAT	.	.	.	END=9622741;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.449397:3,3:2-3,2-3:20,17,0,2:2,2|3,18:2,2:263.617:326.675,113.385:0.484441,0.484441:0.0,0.550717,0.449392
+chr1	9623134	.	AAACAAACAAAC	.	.	.	END=9623145;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:247.555:326.675,113.385:0.0,0.0:0.0,1.54894e-07,1.0
+chr1	9626974	.	TGTGTGTGTGTG	.	.	.	END=9626985;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997736:6,6:6-6,6-6:12,8,0,2:6,12:4,2:138.635:326.675,113.385:0.0,0.0:2.33487e-30,0.00106104,0.998944
+chr1	9629064	.	ACACACACACACAC	.	.	.	END=9629077;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,17,0,0:7,22:NULL:239.609:326.675,113.385:0.0,0.0:0.0,2.05518e-06,1.0
+chr1	9630961	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=9630988;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.911054:14,14:12-15,12-15:8,7,0,2:14,8:8,1|13,1:116.934:326.675,113.385:0.670203,0.670203:4.68467e-11,0.036892,0.963175
+chr1	9632449	.	TATTTATTTATT	.	.	.	END=9632460;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999721:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.398:326.675,113.385:0.0,0.0:0.0,0.000167424,0.999834
+chr1	9638514	.	ACATACATACAT	.	.	.	END=9638525;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,13,0,4:3,27:2,4:249.201:326.675,113.385:0.0,0.0:0.0,1.83583e-08,1.0
+chr1	9640123	.	TAAATAAATAAA	.	.	.	END=9640134;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:334.737:326.675,113.385:0.0,0.0:0.0,9.27498e-09,1.0
+chr1	9643772	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9643803;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.76529:14,16:10-16,16-16:14,11,0,8:13,2|14,2|15,2|16,8:5,1|7,1|8,1|10,1|11,1|12,1|13,1|14,1:240.834:326.675,113.385:1.4234,0.60323:8.8141e-09,0.975704,0.0243449
+chr1	9646643	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=9646702;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.314643:15,17:15-15,15-20:5,7,0,6:15,5:4,1|6,1|7,1|12,1|14,1|17,1:138.479:326.675,113.385:0.0,1.42485:3.16289e-17,5.02754e-08,1.0
+chr1	9647869	.	AAAACAAAACAAAAC	.	.	.	END=9647883;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,13,0,0:3,29:NULL:236.008:326.675,113.385:0.0,0.0:0.0,1.02047e-08,1.0
+chr1	9648036	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=9648079;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.953332:22,22:21-22,21-22:17,20,0,19:21,5|22,12:5,3|6,1|9,3|10,1|13,1|14,1|15,3|16,1|17,1|18,1|19,1|21,1|22,1:429.358:326.675,113.385:0.298675,0.298675:1.24157e-18,0.0456814,0.954391
+chr1	9648525	.	AACAACAACAACAAC	.	.	.	END=9648539;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:5,5:5-5,5-5:18,11,0,2:5,18:4,2:186.423:326.675,113.385:0.0,0.0:0.0,1.53856e-05,0.999986
+chr1	9649233	.	AGCAGCAGCAGCAGCAGC	.	.	.	END=9649250;RU=agc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,5,0,4:6,24:5,4:171.0:326.675,113.385:0.0,0.0:0.0,1.31746e-07,1.0
+chr1	9649872	.	AGACAGACAGAC	.	.	.	END=9649883;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:246.077:326.675,113.385:0.0,0.0:0.0,1.99257e-06,1.0
+chr1	9650822	.	AGGCAGGCAGGC	.	.	.	END=9650833;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:241.716:326.675,113.385:0.0,0.0:0.0,2.43994e-08,1.0
+chr1	9653697	.	AATTAATTAATT	.	.	.	END=9653708;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:210.987:326.675,113.385:0.0,0.0:0.0,1.87657e-06,1.0
+chr1	9654181	.	ACACACACACACACAC	.	.	.	END=9654196;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998193:8,8:8-9,8-9:29,6,0,4:8,26|9,3:5,2|6,1|7,1:220.67:326.675,113.385:0.345543,0.345543:0.0,1.40534e-08,1.0
+chr1	9654418	.	TGTTTGTTTGTT	.	.	.	END=9654429;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:246.432:326.675,113.385:0.0,0.0:0.0,3.09154e-07,1.0
+chr1	9657317	.	TAGGTAGGTAGGTAGG	.	.	.	END=9657332;RU=tagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:158.96:326.675,113.385:0.0,0.0:0.0,3.75096e-06,1.0
+chr1	9657503	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=9657520;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9955:9,9:8-10,8-10:22,5,0,4:8,2|9,18|10,2:5,2|8,2:180.788:326.675,113.385:0.487064,0.487064:2.29285e-31,0.000320013,0.999682
+chr1	9657524	.	GACAGACAGACA	.	.	.	END=9657535;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,5,0,2:3,23:2,2:150.605:326.675,113.385:0.0,0.0:0.0,3.26794e-07,1.0
+chr1	9658926	.	CCCACCCCCACCCCCACC	.	.	.	END=9658943;RU=cccacc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.951281:3,3:3-3,3-3:8,19,0,0:3,8:NULL:214.396:326.675,113.385:0.19802,0.19802:5.9391e-24,0.0431802,0.95689
+chr1	9659382	.	GGTTGGTTGGTTGGTT	.	.	.	END=9659397;RU=ggtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:235.149:326.675,113.385:0.0,0.0:0.0,8.22004e-08,1.0
+chr1	9660032	.	AATTAATTAATT	.	.	.	END=9660043;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.962574:3,3:3-3,3-3:8,4,0,0:3,8:NULL:69.585:326.675,113.385:0.0,0.0:3.78813e-27,0.0192602,0.980778
+chr1	9661858	.	TATTTATTTATT	.	.	.	END=9661869;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999909:3,3:3-3,3-3:16,13,0,4:3,16:2,4:212.817:326.675,113.385:0.0,0.0:0.0,5.11926e-05,0.999949
+chr1	9663095	.	CTTCTTCTTCTTCTT	.	.	.	END=9663109;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,16,0,0:5,21:NULL:225.4:326.675,113.385:0.0,0.0:0.0,3.45165e-06,1.0
+chr1	9667084	.	GTGGGTGGGTGG	.	.	.	END=9667095;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:45,16,0,3:3,45:2,3:346.008:326.675,113.385:0.0,0.0:0.0,9.71045e-14,1.0
+chr1	9670565	.	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	.	.	.	END=9670612;RU=agagac;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999883:8,8:8-8,8-8:16,20,0,11:8,16:2,1|3,2|4,4|5,1|7,3:323.809:326.675,113.385:0.0,0.0:1e-45,8.4119e-05,0.999918
+chr1	9671049	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9671068;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999895:4,4:4-4,4-4:16,8,0,4:4,16:3,4:168.625:326.675,113.385:0.0,0.0:0.0,5.65325e-05,0.999947
+chr1	9677855	.	AATTAATTAATT	.	.	.	END=9677866;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,5,0,0:3,19:NULL:121.778:326.675,113.385:0.0,0.0:0.0,1.26746e-05,0.999987
+chr1	9679931	.	TTAATTAATTAA	.	.	.	END=9679942;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999972:3,3:3-3,3-3:18,5,0,0:3,18:NULL:119.233:326.675,113.385:0.0,0.0:0.0,2.05989e-05,0.999979
+chr1	9680037	.	AAATAAATAAAT	.	.	.	END=9680048;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.920147:3,3:3-3,3-3:7,8,0,0:3,7:NULL:101.501:326.675,113.385:0.0,0.0:1.12079e-23,0.0432247,0.956847
+chr1	9682805	.	TTTGTTTTGTTTTGT	.	.	.	END=9682819;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:212.141:326.675,113.385:0.0,0.0:0.0,9.4052e-07,1.0
+chr1	9683361	.	AAAACAAAACAAAAC	.	.	.	END=9683375;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:256.143:326.675,113.385:0.0,0.0:0.0,5.61949e-08,1.0
+chr1	9687633	.	TCTTCTTCTTCT	.	.	.	END=9687644;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,22,0,2:4,20:3,2:285.82:326.675,113.385:0.0,0.0:0.0,6.53391e-06,0.999994
+chr1	9687930	.	CAACAACAACAACAA	.	.	.	END=9687944;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,7,0,2:5,22:4,2:168.444:326.675,113.385:0.0,0.0:0.0,1.00261e-06,1.0
+chr1	9688759	.	ATTATTATTATT	.	.	.	END=9688770;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:181.887:326.675,113.385:0.0,0.0:0.0,1.26347e-06,1.0
+chr1	9688938	.	TTTGTTTGTTTG	.	.	.	END=9688949;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:193.646:326.675,113.385:0.0,0.0:0.0,1.62571e-06,1.0
+chr1	9689761	.	ACACACACACACACACACAC	.	.	.	END=9689780;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:10,10:10-10,10-10:32,12,0,12:9,2|10,28|11,2:4,1|5,2|6,4|7,4|9,1:354.602:326.675,113.385:0.430892,0.430892:2.5e-44,2.95574e-07,1.0
+chr1	9691108	.	ATTTATTTATTT	.	.	.	END=9691119;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999853:3,3:3-3,3-3:16,3,0,0:3,16:NULL:89.7674:326.675,113.385:0.0,0.0:0.0,6.84543e-05,0.999933
+chr1	9691851	.	AGTAAGTAAGTAAGTA	.	.	.	END=9691866;RU=agta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:177.721:326.675,113.385:0.0,0.0:0.0,4.7318e-06,0.999995
+chr1	9694314	.	ATACATACATAC	.	.	.	END=9694325;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:208.619:326.675,113.385:0.0,0.0:0.0,7.87691e-08,1.0
+chr1	9695885	.	AAATAAATAAAT	.	.	.	END=9695896;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:201.333:326.675,113.385:0.0,0.0:0.0,3.61883e-06,1.0
+chr1	9696536	.	AAATAAATAAAT	.	.	.	END=9696547;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:122.673:326.675,113.385:0.0,0.0:0.0,5.87155e-06,0.999995
+chr1	9699257	.	ACAACAACAACA	.	.	.	END=9699268;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,11,0,3:4,25:3,3:222.319:326.675,113.385:0.0,0.0:0.0,1.11363e-07,1.0
+chr1	9703468	.	AAACAAACAAAC	.	.	.	END=9703479;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996173:3,3:3-3,3-3:11,6,0,2:3,11:2,2:112.545:326.675,113.385:0.0,0.0:4.16261e-36,0.00136399,0.998641
+chr1	9703640	.	TTGTTGTTGTTG	.	.	.	END=9703651;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:125.859:326.675,113.385:0.0,0.0:0.0,9.80125e-06,0.999993
+chr1	9704060	.	TGGTTTTGGTTTTGGTTT	.	.	.	END=9704077;RU=tggttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.201:326.675,113.385:0.0,0.0:0.0,5.56269e-06,0.999995
+chr1	9705815	.	GTTTGTTTGTTTGTTT	.	.	.	END=9705830;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,7,0,0:4,19:NULL:141.001:326.675,113.385:0.0,0.0:0.0,1.56908e-05,0.999986
+chr1	9710499	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=9710522;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999938:6,6:6-6,6-6:18,7,0,3:6,18:2,2|3,1:160.473:326.675,113.385:0.0,0.0:0.0,4.24882e-05,0.999957
+chr1	9710692	.	TTTGTTTGTTTG	.	.	.	END=9710703;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:139.644:326.675,113.385:0.0,0.0:0.0,4.75786e-06,0.999995
+chr1	9710885	.	ATTTATTTATTTATTT	.	.	.	END=9710900;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999157:4,4:4-4,4-4:13,10,0,5:4,13:3,5:177.402:326.675,113.385:0.0,0.0:4.21589e-40,0.000347666,0.999653
+chr1	9712334	.	TAAATAAATAAATAAATAAA	.	.	.	END=9712353;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991102:5,5:5-5,5-5:10,10,0,2:5,10:4,2:149.796:326.675,113.385:0.0,0.0:1.02584e-24,0.00490215,0.995108
+chr1	9712678	.	TGTATGTATGTA	.	.	.	END=9712689;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.328:326.675,113.385:0.0,0.0:0.0,6.61577e-07,1.0
+chr1	9712838	.	GGCTGGCTGGCT	.	.	.	END=9712849;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:160.56:326.675,113.385:0.0,0.0:0.0,2.80029e-06,1.0
+chr1	9713883	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9713918;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.634928:18,18:17-18,17-18:11,11,0,13:17,3|18,8:6,2|8,1|10,1|11,2|12,1|13,1|14,2|16,2|18,1:256.984:326.675,113.385:0.45695,0.45695:1.01629e-14,0.360848,0.639196
+chr1	9719437	.	TAAATAAATAAA	.	.	.	END=9719448;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.708:326.675,113.385:0.0,0.0:0.0,3.85455e-07,1.0
+chr1	9725821	.	AAACAAACAAACAAACAAAC	.	.	.	END=9725840;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999871:5,5:5-5,5-5:16,5,0,5:5,16:2,2|3,1|4,2:147.576:326.675,113.385:0.0,0.0:0.0,5.49581e-05,0.999948
+chr1	9725879	.	AATAAATAAATA	.	.	.	END=9725890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999126:3,3:3-3,3-3:13,8,0,2:3,13:2,2:138.552:326.675,113.385:0.0,0.0:2.34e-43,0.000423082,0.999582
+chr1	9726064	.	ACAACAACAACA	.	.	.	END=9726075;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999997:4,4:4-4,4-4:18,6,0,3:4,18:3,3:146.303:326.675,113.385:0.0,0.0:0.0,1.10421e-05,0.999993
+chr1	9726319	.	GAAAGAAAGAAA	.	.	.	END=9726330;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,11,0,2:3,18:2,2:185.272:326.675,113.385:0.0,0.0:0.0,1.32864e-05,0.999987
+chr1	9726354	.	TATTTATTTATT	.	.	.	END=9726365;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:204.567:326.675,113.385:0.0,0.0:0.0,1.8859e-06,1.0
+chr1	9727029	.	AAAACAAAACAAAACAAAAC	.	.	.	END=9727048;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,17,0,5:4,23:2,1|3,4:276.386:326.675,113.385:0.0,0.0:0.0,2.68601e-07,1.0
+chr1	9728119	.	TTGTTGTTGTTG	.	.	.	END=9728130;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999951:4,4:4-4,4-4:18,5,0,0:4,18:NULL:116.76:326.675,113.385:0.0,0.0:0.0,3.20147e-05,0.999971
+chr1	9728313	.	ATATATATATATATATAT	.	.	.	END=9728330;RU=at;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.673641:9,9:9-10,9-10:5,13,0,0:9,5:NULL:142.839:326.675,113.385:0.603392,0.603392:1.10353e-05,0.188155,0.8119
+chr1	9729577	.	TTGTTGTTGTTG	.	.	.	END=9729588;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,15,0,3:4,28:3,3:269.199:326.675,113.385:0.0,0.0:0.0,1.38348e-08,1.0
+chr1	9729594	.	ATTTATTTATTTATTT	.	.	.	END=9729609;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:27,15,0,3:4,27:3,3:267.498:326.675,113.385:0.169767,0.169767:0.0,3.26584e-08,1.0
+chr1	9730050	.	TGTGTGTGTGTGTGTG	.	.	.	END=9730065;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:45,15,0,5:8,45:5,1|6,1|7,3:360.851:326.675,113.385:0.835916,0.835916:0.0,1.68201e-13,1.0
+chr1	9730553	.	AGGAGGAGGAGG	.	.	.	END=9730564;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,18,0,0:4,20:NULL:241.989:326.675,113.385:0.0,0.0:0.0,9.69816e-06,0.999993
+chr1	9730578	.	GAGGGAGGGAGG	.	.	.	END=9730589;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:240.53:326.675,113.385:0.0,0.0:0.0,1.10364e-07,1.0
+chr1	9731162	.	AAAATAAAATAAAAT	.	.	.	END=9731176;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:205.696:326.675,113.385:0.0,0.0:0.0,1.97209e-08,1.0
+chr1	9732554	.	AATAATAATAAT	.	.	.	END=9732565;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,10,0,2:4,24:3,2:202.029:326.675,113.385:0.0,0.0:0.0,2.81655e-07,1.0
+chr1	9733417	.	ACACACACACACACAC	.	.	.	END=9733432;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:19,13,0,6:8,19:4,1|5,2|7,3:237.836:326.675,113.385:0.0990099,0.0990099:2.27551e-36,5.86533e-06,0.999995
+chr1	9736402	.	GGGTGGGTGGGT	.	.	.	END=9736413;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997205:3,3:3-3,3-3:13,31,0,0:3,13:NULL:332.866:326.675,113.385:0.0,0.0:1.49104e-35,0.00244273,0.997564
+chr1	9736710	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=9736727;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:36,17,0,8:8,2|9,32|10,2:5,6|6,1|9,1:382.691:326.675,113.385:0.0,0.0:0.0,1.24426e-07,1.0
+chr1	9740263	.	TTTGTTTGTTTGTTTG	.	.	.	END=9740278;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,10,0,4:4,27:3,4:231.344:326.675,113.385:0.0,0.0:0.0,2.00338e-08,1.0
+chr1	9740932	.	AATAAATAAATA	.	.	.	END=9740943;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999148:3,3:3-3,3-3:13,9,0,2:3,13:2,2:143.419:326.675,113.385:0.0,0.0:8.42605e-38,0.000372926,0.999629
+chr1	9741427	.	ATATATATATATAT	.	.	.	END=9741440;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98283:7,7:6-7,6-7:9,11,0,2:7,9:6,2:152.903:326.675,113.385:0.40582,0.40582:9.70936e-14,0.00935361,0.990665
+chr1	9742971	.	ACACACACACACACACACACACACACAC	.	.	.	END=9742998;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.673437:14,14:6-14,6-14:10,0,0,5:13,3|14,7:6,1|8,1|11,1|12,1|14,1:88.1707:326.675,113.385:3.81398,3.81398:2.73843e-15,0.316227,0.683785
+chr1	9743019	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9743048;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.714264:14,15:14-15,14-15:4,0,0,2:14,2|15,2:5,1|11,1:35.4905:326.675,113.385:0.492866,0.323567:0.0133686,0.802258,0.184464
+chr1	9743703	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	.	END=9743732;RU=tcttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999756:6,6:6-6,6-6:15,12,0,4:6,15:3,1|4,1|5,2:199.947:326.675,113.385:0.0,0.0:0.0,0.00014613,0.999857
+chr1	9743909	.	AAAACAAAACAAAAC	.	.	.	END=9743923;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,14,0,0:3,31:NULL:250.64:326.675,113.385:0.0,0.0:0.0,5.20746e-09,1.0
+chr1	9748068	.	GCCGCCGCCGCC	.	.	.	END=9748079;RU=gcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,19,0,0:4,22:NULL:267.859:326.675,113.385:0.0,0.0:0.0,4.34809e-06,0.999995
+chr1	9748275	.	TCCTCCTCCTCC	.	.	.	END=9748286;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:288.438:326.675,113.385:0.0,0.0:0.0,4.31425e-09,1.0
+chr1	9748387	.	CACTCACTCACT	.	.	.	END=9748398;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:197.561:326.675,113.385:0.0,0.0:0.0,7.43655e-08,1.0
+chr1	9749147	.	TTTGTTTGTTTGTTTG	.	.	.	END=9749162;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,11,0,0:4,21:NULL:188.623:326.675,113.385:0.0,0.0:0.0,4.79595e-06,0.999995
+chr1	9749755	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9749786;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.507991:16,16:15-17,15-17:9,6,0,10:15,2|16,7:6,1|10,2|14,2|15,5:180.248:326.675,113.385:0.606956,0.606956:3.50875e-07,0.483237,0.516843
+chr1	9750225	.	AGTAGTAGTAGT	.	.	.	END=9750236;RU=agt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:149.83:326.675,113.385:0.0,0.0:0.0,2.38812e-06,1.0
+chr1	9752253	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9752286;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.277617:17,28:17-17,17-29:20,13,0,20:16,2|17,15|18,3:4,1|5,1|6,4|9,1|10,3|11,3|12,1|16,2|17,1|22,1|25,1|27,1:398.995:326.675,113.385:0.0,3.61678:9.044e-42,3.50049e-19,1.0
+chr1	9754367	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9754416;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998768:25,25:20-25,20-25:18,8,0,15:24,2|25,16:6,1|7,1|10,1|12,1|13,1|14,1|15,2|20,2|21,2|22,1|24,2:282.635:326.675,113.385:1.19347,1.19347:5.59785e-17,0.000549827,0.999453
+chr1	9755337	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9755366;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.28343:15,18:15-15,14-21:15,14,0,10:14,3|15,12:7,2|8,2|11,1|13,1|14,2|15,1|18,1:292.839:326.675,113.385:0.0,2.01937:2.47547e-24,2.57404e-05,0.999978
+chr1	9755657	.	TTGTTTGTTTGT	.	.	.	END=9755668;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.226:326.675,113.385:0.0,0.0:0.0,1.51129e-08,1.0
+chr1	9756639	.	TACATACATACA	.	.	.	END=9756650;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:130.067:326.675,113.385:0.0,0.0:0.0,1.92148e-05,0.99998
+chr1	9757162	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9757199;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.810248:19,19:17-19,17-19:18,9,0,10:17,2|18,4|19,12:6,1|8,1|10,2|11,1|12,1|15,1|16,3:255.456:326.675,113.385:0.725682,0.725682:5.86452e-12,0.18951,0.81055
+chr1	9758381	.	GAGGGAGGGAGG	.	.	.	END=9758392;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999413:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.155:326.675,113.385:0.0,0.0:0.0,0.000297211,0.999705
+chr1	9760350	.	TCTGTCTGTCTG	.	.	.	END=9760361;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992456:3,3:3-3,3-3:10,11,0,0:3,10:NULL:145.772:326.675,113.385:0.0,0.0:8.02761e-33,0.00492337,0.995091
+chr1	9762148	.	GCTTGCTTGCTTGCTT	.	.	.	END=9762163;RU=gctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997053:4,4:4-4,4-4:12,3,0,0:4,12:NULL:72.1752:326.675,113.385:0.0,0.0:3.34431e-39,0.0016027,0.998405
+chr1	9762349	.	ATTTATTTATTT	.	.	.	END=9762360;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.86346:3,3:3-3,3-3:6,8,0,0:3,6:NULL:97.6072:326.675,113.385:0.0,0.0:2.96324e-15,0.0753266,0.92477
+chr1	9763714	.	AATAAATAAATAAATA	.	.	.	END=9763729;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999768:4,4:4-4,4-4:16,13,0,0:4,16:NULL:181.07:326.675,113.385:0.0,0.0:0.0,0.000168551,0.999834
+chr1	9763878	.	AAAAACAAAAACAAAAAC	.	.	.	END=9763895;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.123:326.675,113.385:0.0,0.0:0.0,7.80059e-06,0.999994
+chr1	9765363	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9765406;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.72604:21,22:21-22,22-22:7,9,0,11:21,2|22,5:6,1|9,1|10,1|11,2|12,2|13,1|17,1|18,1|20,1:202.097:326.675,113.385:0.499387,0.0990099:2.71366e-05,0.744188,0.255792
+chr1	9765415	.	GCGCGCGCGCGCGC	.	.	.	END=9765428;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997911:7,7:7-7,7-7:13,10,0,0:7,13:NULL:140.463:326.675,113.385:0.0,0.0:7.27135e-33,0.000986207,0.99902
+chr1	9770170	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9770189;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.291365:10,14:10-10,10-14:16,13,0,2:10,16:7,1|13,1:216.461:326.675,113.385:0.0,1.55007:3.90969e-31,1.72145e-07,1.0
+chr1	9770190	.	GCGCGCGCGCGCGCGCGCGC	.	.	.	END=9770209;RU=gc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997978:10,10:10-10,10-10:13,13,0,0:10,13:NULL:176.391:326.675,113.385:0.0,0.0:1.62128e-33,0.00144893,0.998557
+chr1	9770676	.	GCCCAGCCCAGCCCA	.	.	.	END=9770690;RU=gccca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:174.723:326.675,113.385:0.0,0.0:0.0,2.41586e-07,1.0
+chr1	9771804	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9771841;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979498:19,19:18-19,18-19:24,18,0,16:17,2|18,4|19,18:5,1|6,4|9,1|10,1|11,1|12,2|13,2|16,1|17,2|18,1:414.085:326.675,113.385:0.253975,0.253975:4.98745e-19,0.0205358,0.979505
+chr1	9771917	.	CCACCACCACCACCACCACCA	.	.	.	END=9771937;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:24,16,0,5:7,24:3,1|5,1|6,3:286.844:326.675,113.385:0.0,0.0:0.0,2.22096e-07,1.0
+chr1	9772803	.	TATTTATTTATT	.	.	.	END=9772814;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999978:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.7298:326.675,113.385:0.0,0.0:0.0,1.57048e-05,0.999986
+chr1	9773234	.	CACTCACTCACTCACTCACTCACT	.	.	.	END=9773257;RU=cact;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:6,6:6-6,6-6:18,14,0,6:6,18:3,3|4,3:238.929:326.675,113.385:0.0,0.0:0.0,2.30818e-05,0.999979
+chr1	9773465	.	AGGGAGGGAGGG	.	.	.	END=9773476;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995156:3,3:3-3,3-3:11,16,0,0:3,11:NULL:188.95:326.675,113.385:0.0,0.0:5.69066e-29,0.00309688,0.996912
+chr1	9775295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9775348;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.420572:27,29:26-27,25-29:10,19,0,32:26,2|27,8:5,2|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,3|16,1|18,1|19,3|21,1|23,1|24,1|26,3|27,1|28,1|29,1:481.528:326.675,113.385:0.363786,0.950392:1.92112e-27,2.60118e-07,1.0
+chr1	9776621	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9776664;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.690203:21,22:21-22,22-22:8,11,0,16:21,4|22,4:6,2|7,1|8,2|11,1|12,2|17,1|18,2|19,1|20,1|21,2|22,1:266.453:326.675,113.385:0.499779,0.0990099:6.32586e-11,0.695356,0.304656
+chr1	9778986	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=9779005;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989419:4,4:4-4,4-4:9,15,0,4:4,9:3,4:197.918:326.675,113.385:0.0,0.0:1.9785e-29,0.00514016,0.994873
+chr1	9781279	.	ACACACACACAC	.	.	.	END=9781290;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:25,8,0,2:6,25:5,2:188.694:326.675,113.385:0.472766,0.472766:0.0,1.46617e-07,1.0
+chr1	9781294	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=9781321;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:24,8,0,4:7,24:3,2|6,2:202.003:326.675,113.385:0.0990099,0.0990099:0.0,3.46566e-07,1.0
+chr1	9782765	.	ACACACACACAC	.	.	.	END=9782776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:6,6:6-6,6-6:18,11,0,2:6,18:4,1|5,1:185.59:326.675,113.385:0.0,0.0:5.9746e-41,1.31117e-05,0.999987
+chr1	9783489	.	TTAATTAATTAA	.	.	.	END=9783500;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977339:3,3:3-3,3-3:9,11,0,0:3,9:NULL:133.384:326.675,113.385:0.0,0.0:7.88699e-29,0.0123908,0.987638
+chr1	9783579	.	TTTTTCTTTTTCTTTTTC	.	.	.	END=9783596;RU=tttttc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,7,0,2:3,24:2,2:172.379:326.675,113.385:0.0,0.0:0.0,2.68502e-07,1.0
+chr1	9784280	.	CACACACACACA	.	.	.	END=9784291;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:37,17,0,8:6,37:4,1|5,7:375.86:326.675,113.385:0.0,0.0:0.0,2.25615e-11,1.0
+chr1	9784615	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=9784632;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.621118:3,3:2-6,2-6:24,34,0,2:2,3|3,21:2,1|5,1:451.761:326.675,113.385:1.18638,1.18638:0.0,0.0207558,0.979286
+chr1	9784654	.	AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	.	.	.	END=9784685;RU=agaggcag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999119:4,4:4-7,4-7:27,21,0,2:4,24|5,3:3,2:334.649:326.675,113.385:0.839777,0.839777:2.4e-44,9.83233e-08,1.0
+chr1	9784706	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=9784741;RU=agaggc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.395279:6,8:6-6,6-9:21,13,0,6:6,21:3,2|4,3|8,1:264.25:326.675,113.385:0.0,1.03293:0.0,1.19432e-07,1.0
+chr1	9786376	.	GTTTGGTTTGGTTTG	.	.	.	END=9786390;RU=gtttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:189.598:326.675,113.385:0.0,0.0:0.0,5.16134e-06,0.999995
+chr1	9788816	.	AACAACAACAAC	.	.	.	END=9788827;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99973:4,4:4-4,4-4:15,4,0,2:4,15:3,2:112.361:326.675,113.385:0.0,0.0:0.0,0.000101813,0.999902
+chr1	9789386	.	ATTTTATTTTATTTT	.	.	.	END=9789400;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999417:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.853:326.675,113.385:0.0,0.0:0.0,0.000427715,0.999575
+chr1	9796569	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9796608;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.851358:20,20:19-20,19-20:17,12,0,9:19,5|20,12:8,3|10,1|12,1|14,1|16,1|17,2:268.039:326.675,113.385:0.478127,0.478127:1.68661e-13,0.148339,0.85174
+chr1	9798093	.	CCGCCCGCCCGCCCGCCCGC	.	.	.	END=9798112;RU=ccgc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,17,0,4:5,23:3,1|4,3:281.783:326.675,113.385:0.0,0.0:0.0,3.9344e-07,1.0
+chr1	9800381	.	TTTTATTTTATTTTA	.	.	.	END=9800395;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999938:3,3:3-3,3-3:17,8,0,3:3,17:2,3:164.191:326.675,113.385:0.0,0.0:0.0,2.82943e-05,0.999972
+chr1	9801889	.	TTCTTTCTTTCT	.	.	.	END=9801900;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.964687:3,3:3-3,3-3:8,2,0,0:3,8:NULL:48.5915:326.675,113.385:0.0,0.0:5.61729e-24,0.0150769,0.984957
+chr1	9803579	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=9803606;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.815792:14,15:14-14,14-15:17,6,0,4:14,13|15,4:8,2|10,1|12,1:173.844:326.675,113.385:0.0,0.498798:1.52138e-19,2.32917e-05,0.999979
+chr1	9804974	.	TTGTTTGTTTGTTTGT	.	.	.	END=9804989;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998613:4,4:4-4,4-4:13,4,0,0:4,13:NULL:89.6982:326.675,113.385:0.0,0.0:3.39e-43,0.000790602,0.999211
+chr1	9806598	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=9806615;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994489:6,6:6-6,6-6:11,6,0,0:6,11:NULL:99.6822:326.675,113.385:0.0,0.0:1.39924e-26,0.00350447,0.996504
+chr1	9806750	.	TTGTTGTTGTTG	.	.	.	END=9806761;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996284:4,4:4-4,4-4:12,12,0,0:4,12:NULL:157.937:326.675,113.385:0.0,0.0:4.87992e-40,0.00240843,0.997601
+chr1	9806981	.	CGGGCGGGCGGGCGGG	.	.	.	END=9806996;RU=cggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986559:4,4:4-4,4-4:10,12,0,0:4,10:NULL:147.084:326.675,113.385:0.0,0.0:1.26129e-31,0.00847134,0.991547
+chr1	9807678	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9807697;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:132.185:326.675,113.385:0.0,0.0:0.0,2.19567e-06,1.0
+chr1	9808179	.	TGTGTGTGTGTGTGTG	.	.	.	END=9808194;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999918:8,8:8-8,8-8:18,9,0,4:8,18:4,1|5,2|6,1:188.85:326.675,113.385:0.0990099,0.0990099:6.67356e-33,3.72853e-05,0.999964
+chr1	9808200	.	GAGAGAGAGAGA	.	.	.	END=9808211;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,10,0,0:6,24:NULL:186.575:326.675,113.385:0.0,0.0:0.0,6.11492e-07,1.0
+chr1	9808370	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	.	END=9808417;RU=tcca;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999744:12,12:7-12,7-12:16,6,0,5:12,16:2,1|6,1|8,1|9,1|11,1:163.278:326.675,113.385:2.13292,2.13292:2.5e-44,0.000172019,0.999828
+chr1	9808990	.	GTTGGTTGGTTG	.	.	.	END=9809001;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999972:3,3:3-3,3-3:17,12,0,4:3,17:2,4:202.829:326.675,113.385:0.0,0.0:0.0,1.99062e-05,0.99998
+chr1	9812671	.	ATTATATTATATTATATTATATTATATTATATTATATTAT	.	.	.	END=9812710;RU=attat;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.97688:8,8:8-10,8-10:9,3,0,3:8,9:4,1|6,1|8,1:89.9138:326.675,113.385:0.985733,0.985733:7.60617e-29,0.00642369,0.993594
+chr1	9818042	.	CTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=9818065;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994984:12,12:11-12,11-12:18,14,0,6:11,2|12,16:5,2|6,1|7,1|8,1|11,1:258.777:326.675,113.385:0.19802,0.19802:1.30381e-19,0.0050082,0.995003
+chr1	9818295	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9818334;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966917:20,20:19-20,19-20:15,8,0,12:19,3|20,12:5,3|6,1|8,2|9,2|14,3|15,1:238.437:326.675,113.385:0.311527,0.311527:1.02404e-11,0.0317838,0.968277
+chr1	9820226	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9820273;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993385:24,24:21-25,21-25:15,10,0,9:24,15:5,1|7,1|8,1|10,1|11,2|13,1|16,1|20,1:235.877:326.675,113.385:0.561483,0.561483:3.0861e-17,0.000580728,0.999423
+chr1	9821837	.	ATTTATTTATTT	.	.	.	END=9821848;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:156.203:326.675,113.385:0.0,0.0:0.0,4.60405e-07,1.0
+chr1	9821849	.	TATGTATGTATG	.	.	.	END=9821860;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,8,0,3:3,19:2,3:172.917:326.675,113.385:0.0,0.0:0.0,6.31206e-06,0.999994
+chr1	9823285	.	TTCTTTCTTTCT	.	.	.	END=9823296;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,6,0,3:3,23:2,3:167.214:326.675,113.385:0.0,0.0:0.0,4.1974e-07,1.0
+chr1	9824948	.	TGTCTGTCTGTC	.	.	.	END=9824959;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,16,0,3:3,22:2,3:254.318:326.675,113.385:0.0,0.0:9.1404e-41,1.24183e-06,1.0
+chr1	9824960	.	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	.	.	.	END=9825019;RU=tcct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.886348:15,15:15-15,15-15:6,21,0,23:15,6:3,1|4,2|5,1|6,3|7,2|8,5|10,1|11,1|12,2|13,4|15,1:385.936:326.675,113.385:0.19802,0.19802:2.6076e-24,0.0454539,0.95462
+chr1	9825656	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=9825687;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929022:16,16:14-16,14-16:14,15,0,13:15,3|16,11:6,2|7,1|8,1|9,5|12,2|13,1|14,1:311.934:326.675,113.385:0.467134,0.467134:2.76491e-11,0.0697273,0.930367
+chr1	9827879	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=9827922;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990326:11,11:10-11,10-11:10,10,0,13:11,10:3,1|4,1|5,2|6,3|7,1|8,1|9,3|10,1:226.932:326.675,113.385:0.486863,0.486863:3.51965e-21,0.00474081,0.995273
+chr1	9829194	.	CAAACAAACAAA	.	.	.	END=9829205;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:110.934:326.675,113.385:0.0,0.0:0.0,7.53979e-06,0.999994
+chr1	9830384	.	TGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9830407;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:8,8:8-9,8-9:21,13,0,7:8,21:4,1|5,2|6,1|7,3:258.526:326.675,113.385:0.236383,0.236383:0.0,2.35716e-06,1.0
+chr1	9830483	.	ATTTATTTATTTATTT	.	.	.	END=9830498;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,9,0,6:4,25:2,2|3,4:227.354:326.675,113.385:0.0,0.0:0.0,9.26518e-08,1.0
+chr1	9831159	.	CACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=9831204;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979102:23,23:21-23,21-23:10,12,0,17:23,10:5,3|8,1|9,1|11,2|14,2|15,2|16,1|18,1|20,2|21,1|22,1:293.713:326.675,113.385:0.374933,0.374933:2.1171e-11,0.00763937,0.992378
+chr1	9837956	.	AGAAAAGAAAAGAAA	.	.	.	END=9837970;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.123:326.675,113.385:0.0,0.0:0.0,3.63503e-06,1.0
+chr1	9838257	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9838310;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.304945:27,50:27-28,27-50:7,15,0,16:26,2|27,5:7,2|9,1|10,1|13,1|14,1|15,1|16,1|17,1|22,3|25,1|26,1|27,1|48,1:307.266:326.675,113.385:0.242928,10.4355:5.27967e-17,3.53169e-05,0.999964
+chr1	9839831	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9839872;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.679783:20,21:17-21,21-22:14,9,0,9:20,6|21,8:5,1|9,1|10,1|13,2|15,2|16,1|20,1:225.393:326.675,113.385:1.12139,0.433614:2.84722e-07,0.680048,0.319968
+chr1	9840939	.	GGCAGGCAGGCA	.	.	.	END=9840950;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,3:3,26:2,3:250.977:326.675,113.385:0.0,0.0:0.0,5.21674e-08,1.0
+chr1	9841455	.	ATTTATTTATTT	.	.	.	END=9841466;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:18,13,0,3:3,18:2,3:211.788:326.675,113.385:0.0,0.0:0.0,7.91138e-06,0.999994
+chr1	9844142	.	TTTGTTTTGTTTTGT	.	.	.	END=9844156;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.375:326.675,113.385:0.0,0.0:0.0,1.24004e-05,0.999987
+chr1	9845384	.	TTTGTTTGTTTGTTTG	.	.	.	END=9845399;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,13,0,4:4,22:3,4:234.074:326.675,113.385:0.0,0.0:0.0,8.18899e-07,1.0
+chr1	9849556	.	ATAAATAAATAA	.	.	.	END=9849567;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.533:326.675,113.385:0.0,0.0:0.0,2.51299e-06,1.0
+chr1	9852948	.	GTGTGTGTGTGT	.	.	.	END=9852959;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:52,20,0,7:6,52:4,1|5,5|6,1:443.199:326.675,113.385:0.0,0.0:0.0,6.31683e-16,1.0
+chr1	9853686	.	TGGGGGTGGGGGTGGGGG	.	.	.	END=9853703;RU=tggggg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999793:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.883:326.675,113.385:0.0,0.0:0.0,0.000124373,0.999879
+chr1	9854454	.	GGTGTGGGTGTGGGTGTG	.	.	.	END=9854471;RU=ggtgtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,16,0,2:3,28:2,2:277.364:326.675,113.385:0.0,0.0:0.0,2.70576e-08,1.0
+chr1	9855719	.	AAAACAAAACAAAAC	.	.	.	END=9855733;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:254.18:326.675,113.385:0.0,0.0:0.0,3.36552e-07,1.0
+chr1	9856153	.	TCTCTGTCTCTGTCTCTGTCTCTG	.	.	.	END=9856176;RU=tctctg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,11,0,2:4,22:2,1|3,1:200.712:326.675,113.385:0.0,0.0:0.0,1.50182e-06,1.0
+chr1	9856692	.	TTGGTTGGTTGG	.	.	.	END=9856703;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:242.701:326.675,113.385:0.0,0.0:0.0,3.8504e-06,1.0
+chr1	9861552	.	CACACACACACA	.	.	.	END=9861563;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999915:6,6:6-6,6-6:17,11,0,0:6,17:NULL:168.335:326.675,113.385:0.0,0.0:5.68e-43,5.40906e-05,0.999948
+chr1	9862138	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9862197;RU=tc;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.243131:30,37:30-37,30-39:2,8,0,12:30,2:5,2|8,2|15,1|21,1|23,1|24,1|26,1|27,1|31,1|36,1:182.082:326.675,113.385:1.48138,3.03113:6.09945e-17,0.00714323,0.992873
+chr1	9863057	.	GTTGTTGTTGTT	.	.	.	END=9863068;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:248.583:326.675,113.385:0.0,0.0:0.0,1.11874e-08,1.0
+chr1	9864594	.	CACACACACACACACACACACACACACACACACACACA	.	.	.	END=9864631;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.675596:19,19:18-19,18-19:14,11,0,12:18,4|19,10:7,3|8,1|11,1|12,2|13,1|15,1|18,2|19,1:265.578:326.675,113.385:0.484441,0.484441:1.43435e-18,0.32366,0.676349
+chr1	9867773	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9867818;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.323888:23,30:22-23,22-31:17,13,0,26:22,7|23,10:5,1|7,3|9,2|10,1|11,1|12,1|13,1|15,1|17,4|18,3|19,1|20,1|21,4|26,1|30,1:432.974:326.675,113.385:0.236383,3.65447:3.68409e-18,4.2178e-08,1.0
+chr1	9869113	.	AAACAAACAAAC	.	.	.	END=9869124;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,16,0,3:3,29:2,3:287.382:326.675,113.385:0.0,0.0:0.0,5.28486e-09,1.0
+chr1	9869920	.	TTATTTATTTAT	.	.	.	END=9869931;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:295.033:326.675,113.385:0.0,0.0:0.0,3.15431e-08,1.0
+chr1	9870260	.	AAAACAAAACAAAAC	.	.	.	END=9870274;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,19,0,2:3,26:2,2:291.141:326.675,113.385:0.0,0.0:0.0,3.40741e-08,1.0
+chr1	9871386	.	AAACAAACAAAC	.	.	.	END=9871397;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999928:3,3:3-3,3-3:17,14,0,0:3,17:NULL:191.988:326.675,113.385:0.0,0.0:0.0,5.03227e-05,0.999949
+chr1	9879082	.	TTAATTAATTAATTAA	.	.	.	END=9879097;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999416:4,4:2-4,2-4:14,11,0,2:4,14:2,2:168.38:326.675,113.385:0.838725,0.838725:0.0,0.000365613,0.999636
+chr1	9879249	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9879284;RU=ct;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.767584:17,18:16-18,16-18:5,8,0,4:17,2|18,3:5,1|12,1|13,1|18,1:129.478:326.675,113.385:0.680364,0.40047:3.97845e-11,0.813711,0.186351
+chr1	9879878	.	AAATAAATAAAT	.	.	.	END=9879889;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999676:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.7982:326.675,113.385:0.0,0.0:0.0,0.000170969,0.999833
+chr1	9881346	.	AAACAAACAAAC	.	.	.	END=9881357;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:169.089:326.675,113.385:0.0,0.0:0.0,5.3849e-06,0.999995
+chr1	9882998	.	AGAGAGAGAGAGAGAG	.	.	.	END=9883013;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999933:8,8:7-8,7-8:27,19,0,0:7,3|8,24:NULL:287.503:326.675,113.385:0.195027,0.195027:1.96e-43,6.88518e-05,0.999933
+chr1	9885007	.	AAATAAATAAAT	.	.	.	END=9885018;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:265.343:326.675,113.385:0.0,0.0:0.0,6.64981e-07,1.0
+chr1	9885057	.	AAGCAAGCAAGCAAGC	.	.	.	END=9885072;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,22,0,5:4,22:2,1|3,4:322.98:326.675,113.385:0.0,0.0:0.0,9.46111e-07,1.0
+chr1	9885469	.	AAACAAACAAACAAACAAAC	.	.	.	END=9885488;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999898:5,5:5-5,5-5:16,12,0,4:5,16:2,1|4,3:208.683:326.675,113.385:0.0,0.0:0.0,5.205e-05,0.999949
+chr1	9887284	.	GTGTGTGTGTGTGTGT	.	.	.	END=9887299;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:8,8:8-8,8-8:22,23,0,2:8,22:6,2:333.026:326.675,113.385:0.0,0.0:2.00117e-39,1.37359e-06,1.0
+chr1	9887485	.	AACAACAACAAC	.	.	.	END=9887496;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:224.506:326.675,113.385:0.0,0.0:0.0,2.42337e-07,1.0
+chr1	9890042	.	TTACTTACTTAC	.	.	.	END=9890053;RU=ttac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:258.912:326.675,113.385:0.0,0.0:0.0,1.2277e-08,1.0
+chr1	9892145	.	TGCTTGCTTGCT	.	.	.	END=9892156;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:222.228:326.675,113.385:0.0,0.0:0.0,1.95093e-08,1.0
+chr1	9893504	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9893541;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.297224:19,24:19-19,19-25:17,15,0,18:18,2|19,15:5,1|6,1|7,3|8,2|9,1|10,1|12,1|13,3|15,1|16,2|18,1|24,1:372.061:326.675,113.385:0.0,2.45313:2.49488e-16,1.29365e-05,0.999987
+chr1	9893935	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9893984;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.376588:25,27:22-25,22-28:4,22,0,12:25,4:11,2|12,1|14,2|15,1|17,2|18,1|21,1|22,1|27,1:312.196:326.675,113.385:0.5093,1.40594:2.97015e-12,0.000131841,0.999872
+chr1	9898438	.	GTATGTATGTAT	.	.	.	END=9898449;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,2:3,25:2,2:259.815:326.675,113.385:0.0,0.0:0.0,1.99488e-07,1.0
+chr1	9901685	.	TTTGTTTGTTTG	.	.	.	END=9901696;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:227.902:326.675,113.385:0.0,0.0:0.0,1.54881e-06,1.0
+chr1	9902992	.	CAGCCAGCCAGC	.	.	.	END=9903003;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.891041:3,3:3-3,3-3:7,11,0,0:3,7:NULL:128.4:326.675,113.385:0.0,0.0:4.43637e-22,0.0645661,0.935524
+chr1	9903318	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9903365;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.996071:24,25:24-25,24-25:16,16,0,18:23,2|24,9|25,5:5,2|6,1|7,1|8,1|9,4|11,1|13,1|14,2|16,1|19,1|20,1|21,1|22,1:377.873:326.675,113.385:0.195027,0.345543:1.73537e-16,5.01236e-05,0.999949
+chr1	9905688	.	TAAATAAATAAA	.	.	.	END=9905699;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999304:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.728:326.675,113.385:0.0,0.0:0.0,0.000467848,0.999537
+chr1	9908942	.	CTGTCTGTCTGT	.	.	.	END=9908953;RU=ctgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:254.86:326.675,113.385:0.0,0.0:0.0,9.79986e-06,0.999993
+chr1	9909330	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=9909349;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999776:4,4:4-4,4-4:15,4,0,4:4,15:2,2|3,2:126.019:326.675,113.385:0.0,0.0:2e-44,8.28355e-05,0.999918
+chr1	9909905	.	TGGTGGTGGTGGTGG	.	.	.	END=9909919;RU=tgg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:4,2:225.98:326.675,113.385:0.0,0.0:0.0,1.89249e-06,1.0
+chr1	9910263	.	ATGTATGTATGTATGTATGTATGTATGTATGT	.	.	.	END=9910294;RU=atgt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-9,8-9:22,22,0,11:8,22:2,1|3,1|4,4|5,1|7,4:372.409:326.675,113.385:0.169767,0.169767:0.0,1.6759e-06,1.0
+chr1	9911074	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9911103;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995963:15,15:14-16,14-16:23,16,0,9:13,2|14,3|15,18:6,1|9,2|11,2|12,1|13,1|14,2:331.675:326.675,113.385:0.430892,0.430892:3.29582e-21,0.00404109,0.995968
+chr1	9911501	.	TTGTTGTTGTTG	.	.	.	END=9911512;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999989:4,4:4-4,4-4:18,5,0,2:4,18:3,2:133.462:326.675,113.385:0.0,0.0:0.0,1.61308e-05,0.999986
+chr1	9913930	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=9913979;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.284415:25,25:12-25,12-25:6,20,0,11:24,2|25,4:5,1|9,2|11,3|12,1|13,1|16,2|21,1:300.186:326.675,113.385:5.37526,5.37526:0.00137437,0.683164,0.31548
+chr1	9914697	.	TTATTTATTTATTTATTTATTTATTTAT	.	.	.	END=9914724;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999825:7,7:7-7,7-7:16,4,0,0:7,16:NULL:106.409:326.675,113.385:0.0,0.0:1.23276e-40,0.000110242,0.999894
+chr1	9914909	.	TATTTATTTATT	.	.	.	END=9914920;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:237.639:326.675,113.385:0.0,0.0:0.0,2.51367e-06,1.0
+chr1	9916204	.	ACAAACAAACAAACAAACAAACAA	.	.	.	END=9916227;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:22,14,0,6:6,22:3,1|4,1|5,4:270.528:326.675,113.385:0.0,0.0:0.0,5.54593e-07,1.0
+chr1	9916809	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9916844;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987027:18,18:17-19,17-19:14,9,0,3:17,2|18,12:7,1|9,1|15,1:173.626:326.675,113.385:0.329868,0.329868:9.77748e-14,0.0120442,0.987981
+chr1	9918705	.	ATTTATTTATTT	.	.	.	END=9918716;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:223.823:326.675,113.385:0.0,0.0:0.0,2.44769e-07,1.0
+chr1	9920939	.	CACCACCACCAC	.	.	.	END=9920950;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999758:4,4:4-4,4-4:15,8,0,2:4,15:3,2:148.712:326.675,113.385:0.0,0.0:0.0,0.000113113,0.999888
+chr1	9922186	.	GTTTGTTTGTTTGTTT	.	.	.	END=9922201;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,15,0,5:4,22:2,2|3,3:261.244:326.675,113.385:0.0,0.0:0.0,9.56311e-07,1.0
+chr1	9923740	.	AAACAAACAAAC	.	.	.	END=9923751;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:173.336:326.675,113.385:0.0,0.0:0.0,9.15984e-07,1.0
+chr1	9926111	.	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC	.	.	.	END=9926146;RU=tgcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:30,16,0,14:9,30:2,1|3,4|4,2|5,2|6,2|7,1|8,2:372.654:326.675,113.385:0.0,0.0:0.0,2.1782e-09,1.0
+chr1	9927265	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=9927298;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.938:16,17:16-18,17-17:23,16,0,6:16,7|17,14|18,2:6,1|10,1|11,1|14,2|15,1:321.003:326.675,113.385:0.589421,0.0:5.79561e-16,0.937993,0.0620969
+chr1	9928606	.	CAAACAAACAAACAAACAAACAAACAAACAAA	.	.	.	END=9928637;RU=caaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:19,16,0,12:8,19:2,1|3,2|5,4|6,1|7,4:310.491:326.675,113.385:0.0,0.0:7.54194e-38,6.13532e-06,0.999994
+chr1	9929327	.	ATTTATTTATTT	.	.	.	END=9929338;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,16,0,2:3,19:2,2:226.484:326.675,113.385:0.0,0.0:0.0,6.84549e-06,0.999994
+chr1	9931528	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9931551;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999892:12,12:12-12,12-12:25,20,0,8:11,3|12,22:6,3|8,2|9,1|10,2:355.594:326.675,113.385:0.0990099,0.0990099:4.0669e-29,0.000110906,0.999889
+chr1	9932293	.	CATGCATGCATG	.	.	.	END=9932304;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,3,0,0:3,24:NULL:123.691:326.675,113.385:0.0,0.0:0.0,3.65319e-07,1.0
+chr1	9932642	.	TTGTTGTTGTTG	.	.	.	END=9932653;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:36,13,0,2:4,36:3,2:276.95:326.675,113.385:0.0,0.0:0.0,6.98338e-11,1.0
+chr1	9932828	.	ATTTATTTATTT	.	.	.	END=9932839;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,23,0,4:3,30:2,4:361.396:326.675,113.385:0.0,0.0:0.0,6.78511e-09,1.0
+chr1	9934352	.	AATAAATAAATA	.	.	.	END=9934363;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:234.426:326.675,113.385:0.0,0.0:0.0,2.12861e-07,1.0
+chr1	9935825	.	AATAAATAAATA	.	.	.	END=9935836;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:168.481:326.675,113.385:0.0,0.0:0.0,6.61641e-06,0.999994
+chr1	9936450	.	CACACACACACACACACACA	.	.	.	END=9936469;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999835:10,10:10-10,10-10:25,10,0,10:9,2|10,23:5,1|7,3|8,1|9,5:282.769:326.675,113.385:0.0,0.0:2.73707e-27,0.000164869,0.999835
+chr1	9937602	.	AGACAGACAGAC	.	.	.	END=9937613;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,17,0,0:3,38:NULL:306.04:326.675,113.385:0.0,0.0:0.0,3.47401e-11,1.0
+chr1	9938474	.	ATTTATTTATTT	.	.	.	END=9938485;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:201.908:326.675,113.385:0.0,0.0:0.0,3.09853e-06,1.0
+chr1	9944919	.	AAAGAAAGAAAGAAAG	.	.	.	END=9944934;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998394:4,4:4-4,4-4:13,9,0,0:4,13:NULL:133.016:326.675,113.385:0.0,0.0:1.19106e-38,0.00113158,0.998875
+chr1	9945172	.	AAATAAATAAAT	.	.	.	END=9945183;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999466:3,3:3-3,3-3:14,9,0,0:3,14:NULL:135.122:326.675,113.385:0.0,0.0:1.65127e-37,0.000301198,0.999704
+chr1	9946807	.	ATTTATTTATTTATTT	.	.	.	END=9946822;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997971:4,4:4-4,4-4:12,9,0,3:4,12:3,3:150.242:326.675,113.385:0.0,0.0:4.41124e-35,0.000867772,0.999135
+chr1	9947166	.	TCTCTCTCTCTC	.	.	.	END=9947177;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999224:6,6:6-6,6-6:14,10,0,0:6,14:NULL:147.189:326.675,113.385:0.0,0.0:9.76726e-31,0.000426219,0.999576
+chr1	9948124	.	ACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9948161;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.71969:19,19:14-21,14-21:22,12,0,10:17,2|18,5|19,15:4,1|6,4|9,1|10,1|13,1|18,2:308.056:326.675,113.385:1.22324,1.22324:1.63252e-15,0.280307,0.719693
+chr1	9948680	.	GCTAGCTAGCTA	.	.	.	END=9948691;RU=gcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999737:3,3:3-3,3-3:15,10,0,2:3,15:2,2:164.22:326.675,113.385:0.0,0.0:0.0,0.000118598,0.999881
+chr1	9949344	.	GGAGGGAGGGAG	.	.	.	END=9949355;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99956:3,3:3-3,3-3:14,10,0,0:3,14:NULL:148.374:326.675,113.385:0.0,0.0:0.0,0.000285647,0.999719
+chr1	9949792	.	CACACACACACA	.	.	.	END=9949803;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.75241:6,6:6-7,6-7:16,16,0,0:6,14|7,2:NULL:225.665:326.675,113.385:0.472558,0.472558:5.09718e-31,0.000158717,0.999842
+chr1	9952017	.	AATTAATTAATTAATT	.	.	.	END=9952032;RU=aatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998082:4,4:4-4,4-4:13,11,0,0:4,13:NULL:147.239:326.675,113.385:0.0,0.0:8.69591e-40,0.00148927,0.998518
+chr1	9954129	.	AAATAAATAAATAAAT	.	.	.	END=9954144;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999958:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:176.546:326.675,113.385:0.0,0.0:0.0,2.22757e-05,0.999979
+chr1	9955647	.	AAAACAAAACAAAAC	.	.	.	END=9955661;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,21,0,0:3,23:NULL:298.006:326.675,113.385:0.0,0.0:0.0,2.53549e-06,1.0
+chr1	9956363	.	TGTGTGTGTGTG	.	.	.	END=9956374;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:5-6,5-6:24,8,0,2:6,24:5,2:186.469:326.675,113.385:0.169767,0.169767:0.0,2.89937e-07,1.0
+chr1	9956833	.	TTTCTTTCTTTC	.	.	.	END=9956844;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,11,0,0:3,23:NULL:194.583:326.675,113.385:0.0,0.0:0.0,8.88355e-07,1.0
+chr1	9958725	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=9958749;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,14,0,3:5,24:3,1|4,2:243.839:326.675,113.385:0.0,0.0:0.0,2.1328e-07,1.0
+chr1	9964154	.	CACACACACACA	.	.	.	END=9964165;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,17,0,0:6,23:NULL:241.746:326.675,113.385:0.0,0.0:1.526e-42,1.09676e-06,1.0
+chr1	9966035	.	TATTATTATTAT	.	.	.	END=9966046;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999974:4,4:4-4,4-4:18,10,0,0:4,18:NULL:156.766:326.675,113.385:0.0,0.0:0.0,3.35008e-05,0.99997
+chr1	9967640	.	CCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCG	.	.	.	END=9967671;RU=cccg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:27,33,0,9:8,27:4,2|5,4|6,1|7,2:505.436:326.675,113.385:0.0,0.0:0.0,1.28947e-07,1.0
+chr1	9969740	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=9969757;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:19,10,0,4:6,19:5,4:198.517:326.675,113.385:0.0990099,0.0990099:0.0,6.04175e-06,0.999994
+chr1	9970610	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT	.	.	END=9970627;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.362935:9,11:9-9,9-11:15,10,0,5:9,15:5,1|6,1|8,2|11,1:205.017:326.675,113.385:0.0,0.885129:1.01799e-27,4.71352e-08,1.0
+chr1	9971832	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=9971863;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995512:8,8:8-8,8-8:11,11,0,10:8,11:3,1|4,3|5,1|6,3|7,2:221.554:326.675,113.385:0.0,0.0:1.77565e-31,0.00219471,0.997813
+chr1	9973536	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=9973555;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999501:10,10:10-11,10-11:29,14,0,8:10,26|11,3:4,2|5,1|6,1|7,2|8,1|9,1:318.327:326.675,113.385:0.236383,0.236383:1.51294e-36,3.1442e-08,1.0
+chr1	9974995	.	CCTCCCTCCCTCCCTCCCTCCCTCCCTC	.	.	.	END=9975022;RU=cctc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.946905:7,7:6-7,6-7:7,21,0,14:7,7:2,2|3,4|4,2|6,6:331.615:326.675,113.385:0.498798,0.498798:6.1531e-18,0.02783,0.972222
+chr1	9975875	.	AAACAAACAAAC	.	.	.	END=9975886;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,11,0,3:3,24:2,3:215.89:326.675,113.385:0.0,0.0:0.0,1.27547e-07,1.0
+chr1	9977198	.	TTTGTTTGTTTG	.	.	.	END=9977209;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:256.659:326.675,113.385:0.0,0.0:0.0,3.31841e-07,1.0
+chr1	9977219	.	TGTTTGTTTGTT	.	.	.	END=9977230;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:257.592:326.675,113.385:0.0,0.0:0.0,8.22526e-08,1.0
+chr1	9978977	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9979014;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.289981:19,29:19-19,19-32:16,16,0,21:19,16:5,4|7,2|8,2|9,1|10,1|11,3|12,1|13,1|14,1|15,1|17,2|20,1|29,1:399.795:326.675,113.385:0.0,4.91823:2.38919e-27,5.47478e-14,1.0
+chr1	9979016	.	AAAATAAAAATAAAAATA	.	.	.	END=9979033;RU=aaaata;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,15,0,2:3,31:2,2:269.157:326.675,113.385:0.0,0.0:0.0,1.91913e-09,1.0
+chr1	9980211	.	AAATAAATAAATAAAT	.	.	.	END=9980226;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,6,0,3:4,22:3,3:163.046:326.675,113.385:0.0,0.0:0.0,7.88772e-07,1.0
+chr1	9981579	.	AAATAAATAAAT	.	.	.	END=9981590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:174.335:326.675,113.385:0.0,0.0:0.0,3.34348e-06,1.0
+chr1	9982246	.	ACACACACACACACACACAC	.	.	.	END=9982265;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999953:10,10:9-10,9-10:33,12,0,5:9,5|10,26|11,2:5,1|7,2|8,1|9,1:306.31:326.675,113.385:0.242928,0.242928:7.60741e-36,3.70945e-05,0.999964
+chr1	9982521	.	TTGTTGTTGTTG	.	.	.	END=9982532;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:45,9,0,3:4,45:3,3:280.876:326.675,113.385:0.0,0.0:0.0,7.36941e-14,1.0
+chr1	9984525	.	GCAAGAGCAAGAGCAAGA	.	.	.	END=9984542;RU=gcaaga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:239.768:326.675,113.385:0.0,0.0:0.0,1.29823e-07,1.0
+chr1	9986540	.	TTGTTGTTGTTG	.	.	.	END=9986551;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,16,0,0:4,26:NULL:243.992:326.675,113.385:0.0,0.0:0.0,1.1716e-07,1.0
+chr1	9987209	.	AATAAATAAATAAATAAATAAATA	.	.	.	END=9987232;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99986:6,6:6-6,6-6:16,11,0,2:6,16:5,2:179.84:326.675,113.385:0.0,0.0:6.45e-43,7.34505e-05,0.999926
+chr1	9987535	.	CAAACAAACAAACAAA	.	.	.	END=9987550;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999911:4,4:4-4,4-4:16,14,0,5:4,16:3,5:226.155:326.675,113.385:0.0,0.0:0.0,4.04958e-05,0.999963
+chr1	9989590	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9989609;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,8,0,2:5,26:3,1|4,1:193.06:326.675,113.385:0.0,0.0:0.0,7.69892e-08,1.0
+chr1	9989921	.	TCATCATCATCA	.	.	.	END=9989932;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:43,17,0,2:4,43:3,2:346.1:326.675,113.385:0.0,0.0:0.0,4.68102e-13,1.0
+chr1	9990327	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=9990360;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998586:17,17:16-17,16-17:19,17,0,17:16,3|17,16:4,1|7,1|8,4|9,1|10,4|12,1|13,2|14,1|16,1|17,1:373.085:326.675,113.385:0.21692,0.21692:6.86508e-27,0.0012838,0.998723
+chr1	9993008	.	AAATAAATAAAT	.	.	.	END=9993019;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999304:3,3:3-3,3-3:14,7,0,0:3,14:NULL:122.489:326.675,113.385:0.0,0.0:0.0,0.00039125,0.999613
+chr1	9996407	.	AATAAATAAATA	.	.	.	END=9996418;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999931:3,3:3-3,3-3:17,10,0,0:3,17:NULL:153.515:326.675,113.385:0.0,0.0:0.0,4.14139e-05,0.999962
+chr2	2	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99925:9,9:9-9,9-9:14,15,0,8:9,14:3,2|5,2|6,1|8,3:257.71:326.675,113.385:0.0,0.0:5.53904e-32,0.000440525,0.999561
+chr2	10	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999453:8,8:7-9,7-9:15,15,0,2:8,15:4,1|7,1:216.15:326.675,113.385:0.370196,0.370196:1.5076e-32,0.000343545,0.999659
diff --git a/trtools/mergeSTR/tests/mydir/test_MissingFieldWarningscurrent b/trtools/mergeSTR/tests/mydir/test_MissingFieldWarningscurrent
new file mode 120000
index 00000000..9da844e7
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_MissingFieldWarningscurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0/test.vcf
new file mode 100644
index 00000000..e3a3d4d8
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0/test.vcf
@@ -0,0 +1,8009 @@
+##fileformat=VCFv4.1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##source=PopSTR
+##contig=<ID=chr21,length=46709983>
+##INFO=<ID=Motif,Number=1,Type=String,Description="Microsatellite repeat motif">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth">
+##FORMAT=<ID=PL,Number=G,Type=Integer,Description="PHRED-scaled genotype likelihoods">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_popstr1:NA12878	test_file_popstr1:NA12891	test_file_popstr2:NA12892
+chr21	5020351	chr21:5020351:M	GGGGGGGCGGGGGGGGGG	<14>,<17>	.	.	Motif=G	GT:AD:DP:PL	0/2:5,0,11:17:152,197,255,0,90,44	1/2:1,11,6:18:255,84,131,255,0,255	0/0:14,0,0:15:0,44,255,44,255,255
+chr21	5024618	chr21:5024618:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:57,0,3	0/1:5,5:11:61,0,53	0/0:11,1:13:0,12,166
+chr21	5031126	chr21:5031126:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:51,9,0	1/1:0,4:4:66,12,0	0/0:3,0:3:0,9,50
+chr21	5040718	chr21:5040718:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,24:35:255,0,105	0/1:12,13:25:160,0,141	0/0:18,0:19:0,56,255
+chr21	5042862	chr21:5042862:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:116,0,106	0/1:11,6:17:56,0,145	0/0:14,0:16:0,46,255
+chr21	5051279	chr21:5051279:M	TCACTCACTCATTCATCCCACATTCACTCACTCA	<1.8>	.	.	Motif=TCAC	GT:AD:DP:PL	0/1:8,3:11:43,0,165	0/1:4,7:11:142,0,66	0/1:5,7:13:147,0,85
+chr21	5051299	chr21:5051299:M	CATTCACTCACTCATTCATTCATCCCACATTCACTCATTCATTCAT	<4.8>	.	.	Motif=CATT	GT:AD:DP:PL	0/0:2,0:2:0,6,52	0/1:6,3:9:76,0,130	0/1:3,1:4:22,0,67
+chr21	5058258	chr21:5058258:M	TTTTTTTGTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:86,0,12	0/1:6,6:12:68,0,69	0/0:5,0:5:0,15,89
+chr21	5067052	chr21:5067052:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:163,18,0	0/1:8,5:13:99,0,175	0/1:1,1:2:21,0,20
+chr21	5103483	chr21:5103483:M	AAAAAAAAAAAAAAAAAGAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:10:0,29,166	0/0:8,2:12:0,1,119	0/1:4,13:17:174,0,19
+chr21	5103759	chr21:5103759:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<24.5>,<25.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,11,5,0:17:255,68,36,141,0,152,255,72,198,255	2/3:0,1,5,3:9:207,144,125,47,33,23,82,52,0,67	1/1:2,12,0,0:14:169,7,0,175,41,227,208,42,255,255
+chr21	5124343	chr21:5124343:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:8:84,0,12	0/1:8,3:11:19,0,104	0/1:7,2:11:6,0,104
+chr21	5224724	chr21:5224724:M	AAACAAACAAA	<2.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:180,60:256:61,0,255	0/1:172,46:242:27,0,255	0/1:156,91:272:255,0,255
+chr21	5229746	chr21:5229746:M	TTGTTGTTGTTGTT	<4.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:64,30:101:0,1,130	0/1:34,37:82:82,0,20	0/0:59,12:80:0,28,167
+chr21	5230609	chr21:5230609:M	ACACACACACACACACACACACACACACACACAC	<15>,<20>,<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/2:15,0,14,5,7:45:255,255,255,0,190,200,26,236,139,255,100,255,131,255,255	1/4:6,9,0,2,12:30:255,255,255,255,255,255,111,72,255,255,39,0,244,242,223	0/3:27,0,13,17,7:67:255,255,255,152,255,255,0,255,255,255,142,255,255,255,255
+chr21	5230670	chr21:5230670:M	AAAAAAGAAAAAACAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:79,43:122:255,0,255	0/1:72,45:117:255,0,255	0/1:99,20:119:192,0,255
+chr21	5240627	chr21:5240627:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:13,21,20:63:255,32,137,136,0,102	1/2:6,11,26:52:255,124,153,110,0,39	1/2:13,26,35:77:255,128,231,140,0,66
+chr21	5242046	chr21:5242046:M	TCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCT	<12.5>,<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:1,33,6:45:255,44,50,255,0,255	1/2:0,16,11:33:255,95,225,255,0,255	1/2:3,31,7:66:255,19,81,255,0,255
+chr21	5242078	chr21:5242078:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,12:39:77,0,170	1/1:2,10:22:115,4,0	0/1:24,15:56:110,0,240
+chr21	5245137	chr21:5245137:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGT	<14>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,28:82:255,0,255	0/1:19,28:77:255,0,237	0/1:12,44:94:255,0,255
+chr21	5247825	chr21:5247825:M	TTTATTTATTT	<2.5>,<3.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:1,28,9:45:124,41,19,144,0,255	1/2:0,39,16:57:198,101,81,183,0,255	1/2:0,29,15:48:170,101,98,138,0,255
+chr21	5247833	chr21:5247833:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:11,57:76:255,86,0	1/1:7,35:52:255,65,0	1/1:8,80:90:255,154,0
+chr21	5260390	chr21:5260390:M	ATATATATATATATAT	<7>,<9>	.	.	Motif=AT	GT:AD:DP:PL	1/2:5,15,15:36:255,197,255,188,0,255	0/2:4,0,8:12:101,135,255,0,57,33	0/1:23,12,0:35:108,0,255,208,255,255
+chr21	5261573	chr21:5261573:M	TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTT	<16.5>,<17.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/2:0,0,5:16:67,22,68,0,11,16	1/1:0,0,0:5:0,0,0,0,0,0	1/2:0,9,2:30:211,4,92,48,0,46
+chr21	5296708	chr21:5296708:M	ATAATAATAATAATAATAA	<4.7>,<5.3>	.	.	Motif=ATA	GT:AD:DP:PL	1/2:0,4,20:24:255,255,255,84,0,16	1/1:0,4,0:4:116,12,0,96,12,87	2/2:0,3,43:46:255,255,255,134,72,0
+chr21	5327591	chr21:5327591:M	AGTGGAGTGGAGTGGAGTGGAGTTGATCAGAGTGCAGTGGAATTGAATGGAATGGACTGGAATGGAATAGAGTGGAGTGGAGGGGAGTGG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	1/1:0,3:3:36,8,0	0/1:1,3:4:25,0,14	1/1:1,9:10:83,2,0
+chr21	5329879	chr21:5329879:M	GAATGGAATGGAATGGAGTGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	1/1:0,101:101:255,255,0	1/1:0,89:89:255,247,0	1/1:1,106:107:255,255,0
+chr21	5329940	chr21:5329940:M	AATGGAGTGGAATGGAAT	<27>	.	.	Motif=AATGG	GT:AD:DP:PL	0/1:17,101:118:255,0,130	0/1:17,89:106:255,0,167	0/1:17,105:122:255,0,119
+chr21	5329969	chr21:5329969:M	GAGTGGACTGGAGTGGAGTGGAGTTTAGTGGAGTG	<27>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:13,20:33:153,0,247	0/1:4,19:23:169,0,40	0/1:14,26:40:208,0,254
+chr21	5334486	chr21:5334486:M	TTTTTTTTTGTTTGTTTGTTTGTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	.	0/0:1,0:1:0,3,18	1/1:0,17:17:255,50,0
+chr21	5370146	chr21:5370146:M	AAATAATAAATAAATAAATAAATAAA	<7.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:8,1:12:0,19,139	0/1:0,3:6:26,0,20	0/0:9,0:9:0,26,130
+chr21	5448587	chr21:5448587:M	TTTTTTTTTTTTT	<12>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,5,8:24:159,138,224,0,63,255	0/1:17,13,3:33:78,0,129,94,142,255	1/2:9,13,7:29:160,58,111,50,0,255
+chr21	5505757	chr21:5505757:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,2:11:3,0,125	0/1:14,4:18:15,0,181	1/1:0,4:4:69,12,0
+chr21	5511978	chr21:5511978:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,1,3:7:132,92,101,46,0,32	1/2:1,3,1:7:106,33,63,60,0,69	1/2:0,0,5:8:144,124,143,32,0,14
+chr21	5515734	chr21:5515734:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,17:24:248,2,0	0/1:10,8:19:83,0,106	1/1:0,21:22:255,64,0
+chr21	5520202	chr21:5520202:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:2,1:3:2,0,12	0/1:6,3:11:1,0,46	.
+chr21	5520833	chr21:5520833:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,4,0:7:47,8,0,67,20,153	1/2:2,3,4:10:57,51,78,10,0,69	1/1:0,5,0:6:47,13,0,62,15,133
+chr21	5534983	chr21:5534983:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,1:1:5,2,0	0/0:5,2:7:0,3,14	1/1:0,3:3:14,5,0
+chr21	5535008	chr21:5535008:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:87,9,0	0/1:5,4:9:87,0,119	0/1:1,1:3:32,0,21
+chr21	5536014	chr21:5536014:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11:12:220,33,0	1/1:0,9:11:178,27,0	1/1:0,28:29:255,86,0
+chr21	5550856	chr21:5550856:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:6:68,1,0	0/0:5,0:5:0,15,81	0/0:1,0:1:0,3,17
+chr21	5552200	chr21:5552200:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,18:20:255,20,0	0/1:2,2:5:29,0,36	1/1:0,24:25:255,57,0
+chr21	5552591	chr21:5552591:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,3:4:35,8,0	1/1:0,5:7:58,14,0	1/1:0,5:6:58,14,0
+chr21	5555313	chr21:5555313:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:6,11,13:34:130,5,112,9,0,12	0/1:20,7,3:32:32,0,255,27,153,136	0/1:3,17,3:29:210,0,72,114,44,119
+chr21	5557399	chr21:5557399:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:16:158,0,108	0/1:4,6:10:119,0,72	1/1:1,10:12:240,11,0
+chr21	5557715	chr21:5557715:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:21:78,0,255	0/0:14,1:15:0,18,255	0/1:7,6:15:131,0,151
+chr21	5562461	chr21:5562461:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:162,0,96	1/1:1,10:14:218,12,0	0/1:2,10:12:196,0,11
+chr21	5563477	chr21:5563477:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:13,4:18:64,0,255	0/1:13,3:16:31,0,255	0/1:7,6:15:107,0,154
+chr21	5563948	chr21:5563948:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:5:38,0,65	0/1:2,1:6:81,0,49	0/1:2,3:6:91,0,38
+chr21	5564112	chr21:5564112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,10:21:93,0,108	0/1:13,6:20:43,0,135	1/1:3,15:19:191,9,0
+chr21	5580885	chr21:5580885:M	TCTCTCTCTTTCTTTCTTTCCTTCTCTCTCTCT	<4.5>,<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/2:5,0,3:8:57,35,159,0,132,124	0/2:13,1,3:17:83,23,255,0,255,255	1/1:0,4,1:5:215,15,0,51,2,36
+chr21	5582877	chr21:5582877:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,3:3:88,9,0	0/1:0,3:5:74,0,4	1/1:0,1:1:30,3,0
+chr21	5589529	chr21:5589529:M	AAAAGAAAAACAAAAA	<2.8>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:19,0:19:0,53,252	0/1:16,8:24:39,0,145	0/0:15,2:17:0,21,172
+chr21	5592304	chr21:5592304:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:18:38,0,58	0/0:7,0:13:0,26,145	0/1:0,6:10:73,0,17
+chr21	5598766	chr21:5598766:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,12:33:81,0,197	0/0:26,5:31:0,18,255	0/1:21,14:39:90,0,234
+chr21	5613671	chr21:5613671:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	0/1:2,6:19:81,0,11	0/1:4,6:14:73,0,9	1/1:0,10:16:96,1,0
+chr21	5614254	chr21:5614254:M	AGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:13,3:16:27,0,255	0/0:15,0:16:0,31,255	0/1:6,3:10:46,0,126
+chr21	5624629	chr21:5624629:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,9:17:200,0,52	0/1:4,5:13:140,0,43	0/1:6,14:20:234,0,63
+chr21	5625184	chr21:5625184:M	ATTTATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:21,1:22:0,47,194	0/0:21,6:27:0,12,143	0/1:17,9:26:20,0,97
+chr21	5687702	chr21:5687702:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,13:30:255,0,118	0/1:11,15:27:252,0,144	0/1:9,9:18:140,0,132
+chr21	5688257	chr21:5688257:M	ATTTATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:16,5:21:0,6,106	0/0:17,5:22:0,9,114	0/1:20,8:28:5,0,120
+chr21	5693908	chr21:5693908:M	ATTTATTTATTT	<2.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:7,7:16:31,0,16	0/1:7,8:16:31,0,16	1/1:1,11:12:76,20,0
+chr21	5698851	chr21:5698851:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:41:0,66,255	0/1:16,7:27:25,0,128	0/0:30,10:47:0,5,255
+chr21	5711871	chr21:5711871:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,4:4:124,12,0	1/1:0,4:4:119,12,0	1/1:0,4:4:123,12,0
+chr21	5717129	chr21:5717129:M	TTTTTTTTTTTTTTTTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,0,1:4:27,0,20,6,0,22	1/2:0,1,3:5:102,66,65,37,0,27	1/2:0,5,2:9:187,47,30,134,0,125
+chr21	5738430	chr21:5738430:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,2:9:0,4,36	0/0:8,0:13:0,28,96	1/1:0,4:7:41,12,0
+chr21	5745954	chr21:5745954:M	CACACACACACACACACACACACACAC	<14.5>,<15.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:19,2,0:21:0,34,207,57,255,255	0/0:15,4,0:19:0,4,131,45,182,255	1/2:2,5,3:10:77,12,9,24,0,55
+chr21	5757052	chr21:5757052:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,5:25:0,11,166	0/1:7,12:22:73,0,48	0/1:16,7:23:16,0,115
+chr21	5758152	chr21:5758152:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/1:31,10:41:28,0,255	0/0:34,1:35:0,85,255	0/1:31,11:42:37,0,255
+chr21	5762970	chr21:5762970:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,6:18:19,0,86	0/0:19,1:20:0,43,199	0/1:22,8:30:9,0,165
+chr21	5772988	chr21:5772988:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:2,8:11:82,1,0	1/1:3,12:15:119,2,0	1/1:0,17:17:229,48,0
+chr21	5774011	chr21:5774011:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:127,0,91	0/1:8,12:20:147,0,78	0/1:6,15:21:203,0,44
+chr21	5784132	chr21:5784132:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:7:7,0,36	0/0:6,0:7:0,8,63	0/1:6,3:9:13,0,51
+chr21	5790769	chr21:5790769:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,68,255	0/1:9,5:14:42,0,109	0/0:23,2:25:0,39,255
+chr21	5794367	chr21:5794367:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,13:45:80,0,255	0/1:17,16:38:172,0,176	0/0:30,3:33:0,48,255
+chr21	5859014	chr21:5859014:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,1:15:0,26,98,16,76,77	0/1:2,3,0:5:12,0,4,24,13,53	0/2:6,0,3:11:1,16,65,0,29,33
+chr21	5866538	chr21:5866538:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:13,4:17:1,0,110	0/0:17,2:21:0,33,198	0/1:3,4:9:44,0,12
+chr21	5877636	chr21:5877636:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,3:15:0,7,100	0/1:7,7:16:34,0,53	0/1:16,6:22:7,0,117
+chr21	5878736	chr21:5878736:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/1:21,9:30:44,0,218	0/0:33,3:36:0,60,255	0/1:24,12:36:69,0,240
+chr21	5881133	chr21:5881133:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:2,4:6:32,0,8	0/1:3,1:4:1,0,25	.
+chr21	5883554	chr21:5883554:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:13:22,0,56	0/0:28,4:34:0,47,255	0/1:22,10:33:24,0,169
+chr21	5893572	chr21:5893572:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:2,15:17:176,21,0	1/1:2,14:17:158,19,0	1/1:0,14:14:187,39,0
+chr21	5894595	chr21:5894595:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:13:33,0,115	0/1:6,12:18:152,0,49	0/1:6,9:16:119,0,59
+chr21	5904716	chr21:5904716:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,25,113	0/0:5,0:5:0,14,62	0/1:8,4:13:14,0,76
+chr21	5910071	chr21:5910071:M	GGGAGGGGGGAGGGA	<3.5>	.	.	Motif=GGGA	GT:AD:DP:PL	0/0:19,2:21:0,10,255	0/1:8,3:11:43,0,171	0/0:17,0:17:0,51,255
+chr21	5914951	chr21:5914951:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,10,0:33:68,0,255,135,255,255	0/2:12,9,9:31:187,22,124,0,68,255	0/0:40,0,0:41:0,119,255,123,255,255
+chr21	5972367	chr21:5972367:M	TTTTGTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,29,180	0/0:3,0:5:0,14,74	0/1:5,3:8:29,0,64
+chr21	5980542	chr21:5980542:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,11:12:185,17,0	0/1:2,12:16:163,0,11	1/1:1,8:9:127,8,0
+chr21	5981384	chr21:5981384:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:7:34,0,52	0/1:6,1:9:3,0,89	0/0:9,1:13:0,5,140
+chr21	5983797	chr21:5983797:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4,0:10:85,0,115,70,132,199	0/1:1,2,1:5:55,0,16,18,12,44	0/2:2,0,3:5:69,49,92,0,52,45
+chr21	5990439	chr21:5990439:M	TTTTTTTTTTTGTTGTTGTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:17:119,0,91	0/1:6,13:19:174,0,50	0/1:9,3:12:20,0,129
+chr21	5990535	chr21:5990535:M	TTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:15:156,0,174	0/1:3,0:5:13,0,86	0/0:7,0:9:0,9,189
+chr21	5996445	chr21:5996445:M	TTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,6:14:255,111,133,160,0,135	0/1:4,10,2:17:253,0,86,230,33,255	1/2:0,12,3:18:255,60,40,255,0,255
+chr21	6005386	chr21:6005386:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:9,9:18:124,0,121	0/1:9,8:17:98,0,113	0/1:7,14:21:207,0,70
+chr21	6020382	chr21:6020382:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGTGTGTG	<21>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,3:3:95,9,0	0/1:4,5:9:131,0,86	0/1:4,3:8:72,0,102
+chr21	6040905	chr21:6040905:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:26:203,0,128	0/1:10,6:17:65,0,127	0/1:12,10:23:115,0,161
+chr21	6070033	chr21:6070033:M	TGTGTGTGAGGTGTGTGGTGTGTGTG	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,14:33:71,0,255	0/1:30,12:42:19,0,255	0/1:26,16:42:68,0,255
+chr21	6070105	chr21:6070105:M	TGTGTGTGTAGTGTATGTGGTTGTGTG	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,14:36:66,0,255	0/1:27,12:39:31,0,255	0/1:30,16:46:60,0,255
+chr21	6071721	chr21:6071721:M	GGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/1:1,3:4:40,0,5	1/1:0,1:1:17,3,0	1/1:0,3:3:51,9,0
+chr21	6072175	chr21:6072175:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:10:42,0,78	0/0:2,0:2:0,6,34	1/1:0,1:1:18,3,0
+chr21	6073138	chr21:6073138:M	CCCCCCCACCCCCCCCC	<16>,<18>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,16,0:16:216,45,0,255,48,255	1/2:0,3,1:4:41,12,12,38,0,61	1/2:0,3,3:6:62,39,55,39,0,56
+chr21	6075369	chr21:6075369:M	TTTTTTTTTTAGTTTTTTAGTTTTTGTTTTTTTTGCTTTTTTTTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:7:33,0,52	0/0:4,0:4:0,12,69	0/1:1,1:2:12,0,12
+chr21	6097940	chr21:6097940:M	CACACACACACACACACACACACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:28:0,82,255	0/1:16,8:26:62,0,220	0/0:31,1:33:0,79,255
+chr21	6100222	chr21:6100222:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,13,7:21:255,105,63,177,0,180	0/2:22,1,6:31:93,94,255,0,255,255	1/1:2,18,3:23:255,32,0,242,15,255
+chr21	6109896	chr21:6109896:M	GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<27>,<29>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,5,4:10:255,255,255,108,108,88,143,142,0,128	1/2:0,3,4,0:9:211,130,120,81,0,66,209,127,84,209	3/3:0,0,0,6:6:184,184,184,179,179,175,18,18,18,0
+chr21	6132994	chr21:6132994:M	ATATATATATATATATATATATATATA	<12.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:2,0,5:8:137,143,168,0,31,35	1/2:0,6,1:7:97,23,6,90,0,156	0/0:9,0,0:10:0,29,151,30,178,255
+chr21	6222189	chr21:6222189:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,7:38:0,6,255	0/0:35,0:36:0,102,255	0/1:15,14:30:116,0,142
+chr21	6228654	chr21:6228654:M	TTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:8:68,0,52	0/0:4,0:5:0,12,107	0/1:4,2:18:46,0,159
+chr21	6240057	chr21:6240057:M	AGAGAGAGAGAAGGAAAGAAAGAAAGAGAGAGA	<5.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:4,0:5:0,3,94	0/1:9,4:13:111,0,244	.
+chr21	6256852	chr21:6256852:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,17:26:233,0,64	0/1:6,5:11:51,0,68	0/1:17,22:41:255,0,182
+chr21	6257009	chr21:6257009:M	AAAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,4:15:81,58,255,0,220,202	0/1:5,6,0:11:181,0,105,72,120,175	0/2:8,0,5:14:96,60,255,0,208,193
+chr21	6257055	chr21:6257055:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,21:23:255,18,0	1/1:0,5:5:140,15,0	0/1:16,25:46:255,0,255
+chr21	6257476	chr21:6257476:M	ACAACAACAACAACAACAACA	<10>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:5,4:10:86,0,97	0/1:12,2:15:10,0,255	0/1:3,2:9:61,0,59
+chr21	6258497	chr21:6258497:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,12:17:231,0,48	0/1:3,6:10:123,0,41	1/1:0,14:14:255,42,0
+chr21	6263230	chr21:6263230:M	CTGAAACTGAAA	<2.2>	.	.	Motif=CTGAAA	GT:AD:DP:PL	0/1:16,11:28:53,0,104	0/0:16,3:20:0,19,150	0/1:12,11:24:66,0,70
+chr21	6263239	chr21:6263239:M	AAAAGAAAAAAACAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,9:27:252,0,255	0/1:17,2:21:3,0,255	0/1:8,8:16:238,0,190
+chr21	6263552	chr21:6263552:M	TTTTTTTTTTTATTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:13:151,0,78	0/1:3,4:8:94,0,53	0/1:3,6:12:151,0,41
+chr21	6265649	chr21:6265649:M	AAAAAAAAAAAA	<10>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12,9:38:117,0,215,130,17,255	0/0:25,5,2:42:0,9,255,85,218,255	1/2:2,16,13:36:255,81,237,236,0,255
+chr21	6266473	chr21:6266473:M	AAAAAAAAAAAAACAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,8,7:22:247,17,54,35,0,39	0/2:16,1,7:31:84,26,255,0,255,240	0/1:5,7,9:23:232,0,66,1,0,30
+chr21	6268291	chr21:6268291:M	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTCCTTCTTC	<22.7>	.	.	Motif=TCT	GT:AD:DP:PL	1/1:0,3:5:90,9,0	1/1:0,2:5:106,12,0	0/0:0,0:1:0,0,0
+chr21	6268762	chr21:6268762:M	TGTGTGTGTGTG	<7>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,23:23:255,63,0	1/1:0,1:1:11,3,0	1/1:2,24:27:244,39,0
+chr21	6270105	chr21:6270105:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:72,14,0	0/1:3,2:5:14,0,28	0/0:1,0:1:0,3,14
+chr21	6284922	chr21:6284922:M	TGTGTGTGTGTGTGTGTGTGTGTGGTGTGTTTGTGTGT	<17>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,14:14:255,42,0	0/1:5,8:14:130,0,57	1/1:0,23:23:255,68,0
+chr21	6299706	chr21:6299706:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:3,1:5:9,0,29	0/1:4,5:14:67,0,26	.
+chr21	6299731	chr21:6299731:M	TTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3,0:10:13,0,27,31,49,149	0/2:3,1,3:7:55,42,54,0,19,64	0/0:2,0,0:2:0,5,19,6,25,49
+chr21	6300103	chr21:6300103:M	AAAAAAAAAAAAAAGAAAAAGAAAAGAAAAGAAAAAAA	<37>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4,0:6:23,0,4,40,21,125	1/2:3,5,5:14:90,76,114,19,0,115	1/1:0,3,0:5:28,8,0,37,9,78
+chr21	6300733	chr21:6300733:M	CACACACAAACACATCACACACACACACACACACACACA	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:4,0:4:0,10,37	0/1:5,3:8:7,0,26	.
+chr21	6305211	chr21:6305211:M	TTTTTTTTCTTTTTTCTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:17:196,15,0	0/1:4,9:13:107,0,26	1/1:0,20:20:255,58,0
+chr21	6308951	chr21:6308951:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,3:8:142,74,107,80,0,65	0/1:0,2,0:3:51,0,12,54,15,67	1/2:0,0,2:4:49,44,70,12,0,3
+chr21	6315192	chr21:6315192:M	ACACACACACAGACAGACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,5:9:54,0,38	0/1:18,5:23:11,0,211	1/1:0,3:3:47,9,0
+chr21	6320083	chr21:6320083:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,7:36:21,0,255	0/0:19,1:20:0,41,255	0/1:19,9:28:74,0,250
+chr21	6325896	chr21:6325896:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:200,23,0	0/1:19,4:24:6,0,243	0/1:14,4:18:15,0,184
+chr21	6334410	chr21:6334410:M	TTGTTGTATGTTGTTTTATTGTTGCTTTTATTGATGTATGTTGTTTTTTGTTGCTTTTATTGTTGTTGTT	<13.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:5,4:11:91,0,102	0/1:9,2:20:26,0,201	0/1:4,1:7:14,0,89
+chr21	6335235	chr21:6335235:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:19:59,0,97	0/1:13,5:21:10,0,152	0/0:6,0:6:0,17,84
+chr21	6337885	chr21:6337885:M	AAAAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,9,7:27:123,66,137,0,12,255	0/1:20,18,2:43:125,0,139,194,205,255	0/2:14,13,7:36:111,33,137,0,12,255
+chr21	6351126	chr21:6351126:M	AAAATAAAATAAA	<2.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:34,6:40:0,40,255	0/0:37,5:42:0,57,255	0/1:31,16:47:55,0,226
+chr21	6352933	chr21:6352933:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/1:15,16:31:177,0,161	0/1:17,8:25:56,0,200	0/0:19,3:22:0,15,255
+chr21	6356407	chr21:6356407:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:12:218,39,9,169,0,158	1/2:0,1,0:4:62,31,28,29,0,22	1/2:0,2,3:10:202,85,67,109,0,93
+chr21	6371108	chr21:6371108:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>,<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,4,3:23:255,57,46,188,0,132,255,14,163,255	2/3:5,1,3,10:30:115,57,255,16,90,57,28,11,0,13	1/2:3,9,7,1:28:255,43,91,130,0,110,250,22,135,227
+chr21	6374684	chr21:6374684:M	AAAAAAAAAAAAAAGAAAAGAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:70,6:84:0,94,255	0/1:41,17:68:93,0,255	0/0:82,3:93:0,216,255
+chr21	6376674	chr21:6376674:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,116:144:255,255,0	1/1:2,75:138:255,255,0	1/1:0,113:113:255,255,0
+chr21	6441721	chr21:6441721:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:40,0,22	0/1:3,5:8:63,0,28	0/1:2,0:3:1,0,27
+chr21	6444559	chr21:6444559:M	AAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,15:17:255,0,9	0/1:2,12:16:255,0,12	0/0:2,0:4:0,9,73
+chr21	6445451	chr21:6445451:M	GCCAGGCCAGGC	<1.4>	.	.	Motif=GCCAG	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:21,0:21:0,62,255	0/1:10,8:18:97,0,135
+chr21	6452919	chr21:6452919:M	TTTTCTTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:17:147,0,62	0/1:3,8:12:109,0,20	0/0:12,0:12:0,35,217
+chr21	6480511	chr21:6480511:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,72	.	0/1:5,3:10:25,0,76
+chr21	6523931	chr21:6523931:M	AAGAAGAAGAAGAAGAAGAA	<8.7>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:13,9:27:140,0,255	0/1:2,14:18:255,0,15	0/0:17,0:18:0,51,255
+chr21	6544947	chr21:6544947:M	TTTTTCGTTTTTGTTTTTGTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:2,2:4:24,0,24	0/0:11,0:11:0,32,198	0/1:4,6:10:78,0,43
+chr21	6559518	chr21:6559518:M	AATAATAATAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:9,0:9:0,27,253	0/0:8,0:8:0,24,225	0/1:11,12:23:255,0,241
+chr21	6572511	chr21:6572511:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/1:6,3:9:29,0,83	0/0:20,0:20:0,59,255
+chr21	6572679	chr21:6572679:M	TGTGTGTGTGTGTGTGGGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:14,2:16:0,7,231	0/0:11,0:11:0,32,200	1/1:0,7:7:135,21,0
+chr21	6576800	chr21:6576800:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:17:115,0,96	0/0:11,0:11:0,32,192	1/1:1,20:21:255,44,0
+chr21	6632687	chr21:6632687:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5,0:8:185,21,0,174,17,168	1/2:0,3,1:6:107,27,17,78,0,73	1/2:0,3,3:12:252,144,126,93,0,67
+chr21	6637988	chr21:6637988:M	TTTATTTTATTTT	<2.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/0:40,4:44:0,73,255	0/0:33,4:38:0,55,255	0/1:29,14:44:48,0,239
+chr21	6651229	chr21:6651229:M	TTTTTTTTTTTTT	<12>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,5,6:18:111,70,115,0,4,195	0/1:16,14,1:32:92,0,129,159,192,255	1/2:10,15,7:34:184,62,124,64,0,255
+chr21	6653878	chr21:6653878:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:19:31,0,111	0/1:16,6:23:21,0,154	0/0:6,0:6:0,17,83
+chr21	6654647	chr21:6654647:M	AACAACAACAATAAAAGCAACAAAAAACAACATACATCAATAAAAGCAACAATAAAACAACATACAACAA	<13.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:7,7:18:143,0,141	0/1:17,12:36:228,0,255	1/1:1,10:14:239,7,0
+chr21	6660338	chr21:6660338:M	TTTTTTTATTTTATTTTATTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,2:18:0,5,255	0/0:20,1:25:0,38,255	0/1:8,4:12:62,0,148
+chr21	6663216	chr21:6663216:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:166,29,0	0/1:11,5:16:36,0,135	0/1:11,3:15:10,0,146
+chr21	6664000	chr21:6664000:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,3:35:0,58,255	0/0:47,6:53:0,69,255	0/1:29,11:40:36,0,255
+chr21	6666585	chr21:6666585:M	AAAAAAAAAAAAAACAAAAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,54,255	0/0:6,0:6:0,18,155	0/1:11,4:16:55,0,234
+chr21	6669849	chr21:6669849:M	AAAAAACAAAAAACAAACAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:65,0,231	0/1:11,4:15:62,0,251	0/0:5,0:7:0,18,149
+chr21	6673910	chr21:6673910:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,2:11:3,0,125	0/1:13,4:17:17,0,167	1/1:0,5:5:86,15,0
+chr21	6680131	chr21:6680131:M	ACACACACACACACACACACACACACACACACACACACACACACA	<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,5:7:127,18,0	0/1:3,0:7:12,0,50	1/1:0,4:8:107,15,0
+chr21	6683887	chr21:6683887:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<27>,<28>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,8:12:166,96,112,33,0,16	2/2:2,0,16:18:227,233,255,20,52,0	2/2:0,0,15:16:251,240,237,44,35,0
+chr21	6688355	chr21:6688355:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,3:4:20,0,0	0/1:2,1:5:15,0,7	.
+chr21	6688986	chr21:6688986:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,2:9:58,23,24,47,0,137	0/2:5,0,4:13:46,72,137,0,50,65	1/1:0,2,0:3:19,5,0,25,6,50
+chr21	6689379	chr21:6689379:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4,2:9:53,0,35,21,12,27	0/2:4,1,4:10:21,20,92,0,37,21	0/1:4,2,0:7:16,0,69,16,43,45
+chr21	6689395	chr21:6689395:M	AGAGAGAGAGAGAGGGAGAGAGAGAG	<12.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:4,0:9:0,1,83	0/1:4,4:13:56,0,71	0/1:0,0:4:3,0,4
+chr21	6703136	chr21:6703136:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:3,3:6:4,0,4	0/0:3,0:4:0,7,19	1/1:0,1:1:5,2,0
+chr21	6703161	chr21:6703161:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:133,15,0	0/1:4,2:6:36,0,91	0/1:1,1:2:22,0,21
+chr21	6704167	chr21:6704167:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,21:24:255,62,0	1/1:1,9:13:160,10,0	1/1:0,21:21:255,62,0
+chr21	6710597	chr21:6710597:M	AAAAGAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,4:6:118,48,31,23,0,6	1/1:0,0,0:1:18,3,0,13,3,11	1/1:0,3,0:3:84,9,0,44,8,35
+chr21	6720353	chr21:6720353:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,19:20:255,37,0	0/1:3,3:6:47,0,48	0/1:2,22:27:255,0,19
+chr21	6720744	chr21:6720744:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,5:9:58,14,0	1/1:0,4:8:47,11,0	1/1:0,3:4:35,8,0
+chr21	6723466	chr21:6723466:M	TTTTTTTTTTTT	<10>,<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,8,12,5:37:80,17,231,0,76,55,127,102,43,255	0/2:17,1,9,1:28:17,55,255,0,144,85,76,205,100,236	1/3:5,23,1,14:43:255,75,255,245,207,255,255,0,174,255
+chr21	6725552	chr21:6725552:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,9:15:218,0,34	0/1:4,4:10:80,0,89	0/1:4,5:11:116,0,71
+chr21	6725868	chr21:6725868:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,7:27:120,0,255	0/1:9,3:14:49,0,208	0/1:12,9:21:201,0,255
+chr21	6730614	chr21:6730614:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,18:23:255,0,29	0/1:10,6:17:84,0,182	1/1:0,23:24:255,72,0
+chr21	6732265	chr21:6732265:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,15:27:152,0,106	0/1:12,5:17:25,0,129	0/1:3,12:15:138,0,2
+chr21	6828166	chr21:6828166:M	ATGAAGAACTGAATGAATGAATGAATGAATGAATGAAT	<10.5>	.	.	Motif=ATGA	GT:AD:DP:PL	1/1:0,14:14:255,41,0	0/1:15,8:23:78,0,203	0/1:11,6:17:63,0,155
+chr21	6987408	chr21:6987408:M	TTTTTTTATTTTATTTTATTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,4:15:54,0,215	0/0:18,0:21:0,54,255	0/1:6,3:10:46,0,134
+chr21	6990286	chr21:6990286:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:13:121,0,17	0/0:20,4:24:0,4,255	0/1:5,5:10:56,0,56
+chr21	6991070	chr21:6991070:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,4:46:0,75,255	0/0:35,6:41:0,35,255	0/1:35,16:52:81,0,255
+chr21	6993655	chr21:6993655:M	AAAAAAAAAAAAAACAAAAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,51,255	0/0:13,0:14:0,39,255	0/1:8,5:14:97,0,166
+chr21	7000980	chr21:7000980:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,3:14:13,0,155	0/1:18,4:22:4,0,241	1/1:0,5:5:88,15,0
+chr21	7007201	chr21:7007201:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<16.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,5,0,3:13:223,73,91,154,108,174,139,0,81,143	0/1:3,4,0,0:8:110,0,61,68,75,130,119,62,130,175	2/3:1,0,3,3:11:150,131,186,90,153,145,55,41,0,54
+chr21	7010957	chr21:7010957:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:18:255,52,0	0/1:6,19:26:232,0,32	1/1:0,9:9:149,26,0
+chr21	7016056	chr21:7016056:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,5,2:8:50,22,23,38,0,111	0/2:3,1,5:11:71,76,111,0,9,47	1/1:0,3,0:3:28,8,0,37,9,75
+chr21	7016449	chr21:7016449:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:7:1,0,67	0/1:5,2:10:12,0,80	0/1:3,3:6:37,0,37
+chr21	7031236	chr21:7031236:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,13:16:255,39,0	0/1:2,10:12:162,0,4	1/1:0,19:19:255,56,0
+chr21	7046078	chr21:7046078:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:17,3,0	0/1:9,6:15:53,0,102	0/0:4,0:4:0,12,66
+chr21	7047422	chr21:7047422:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,17:17:255,51,0	0/0:2,0:4:0,11,64	1/1:0,29:30:255,71,0
+chr21	7047813	chr21:7047813:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,2:5:23,5,0	1/1:0,1:3:12,3,0	1/1:0,7:7:82,19,0
+chr21	7050535	chr21:7050535:M	TTTTTTTTTTTT	<10>,<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/3:7,15,5,10:37:177,15,205,98,112,152,180,0,70,255	0/2:14,1,9,5:29:14,56,255,0,152,90,42,148,50,173	1/3:4,16,4,13:37:241,67,249,163,168,216,219,0,93,255
+chr21	7052621	chr21:7052621:M	AAAAAAAAAAATAAAAAAAAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,5:9:151,36,30,14,0,15	0/2:3,0,5:9:111,52,93,0,60,61	0/2:2,2,7:11:174,53,62,0,15,21
+chr21	7052937	chr21:7052937:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,7:25:122,0,255	0/0:19,2:21:0,6,255	0/1:8,9:19:196,0,166
+chr21	7057683	chr21:7057683:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,9:12:176,0,34	0/1:2,7:9:129,0,20	1/1:1,11:13:231,12,0
+chr21	7058699	chr21:7058699:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:6,5:11:96,0,120	0/0:16,1:18:0,23,255	0/1:4,2:9:40,0,96
+chr21	7059170	chr21:7059170:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:12:158,0,103	0/1:5,0:6:14,0,126	0/1:1,3:5:75,0,30
+chr21	7059334	chr21:7059334:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,16:29:162,0,116	0/1:12,3:15:1,0,135	0/1:5,10:15:108,0,33
+chr21	7078099	chr21:7078099:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:2,3:6:71,0,44	0/1:1,3:5:78,0,17	1/1:0,1:1:31,3,0
+chr21	7084755	chr21:7084755:M	AAAAGAAAAACAAAAA	<2.8>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:17,2:19:0,29,174	0/1:13,5:18:9,0,102	0/0:19,4:23:0,16,174
+chr21	7087530	chr21:7087530:M	AAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,1,0:7:0,1,58,6,24,33	0/0:3,0,0:5:0,9,49,6,31,23	1/2:3,4,4:15:52,24,119,34,0,57
+chr21	7093992	chr21:7093992:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,5:27:0,5,248	0/0:29,2:31:0,60,255	0/1:14,10:25:73,0,141
+chr21	7103609	chr21:7103609:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:15,6:22:13,0,132	0/0:15,0:15:0,41,178	0/0:17,4:24:0,14,170
+chr21	7108897	chr21:7108897:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>,<8.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	1/2:2,3,3:11:53,15,40,45,0,89	1/1:1,4,0:8:55,7,0,72,18,119	1/1:0,9,1:10:95,17,0,110,8,178
+chr21	7119855	chr21:7119855:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,9:15:185,0,38	0/1:6,6:14:130,0,80	0/1:4,12:16:209,0,34
+chr21	7126061	chr21:7126061:M	ATTTATTTATTT	<2.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:9,4:14:9,0,34	0/1:9,7:16:16,0,30	1/1:6,14:22:68,4,0
+chr21	7134149	chr21:7134149:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,7:26:85,0,255	0/1:15,15:36:246,0,249	0/1:27,9:45:111,0,255
+chr21	7144022	chr21:7144022:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,7:7:204,21,0	1/1:0,1:1:32,3,0	1/1:0,5:5:149,15,0
+chr21	7149280	chr21:7149280:M	TTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,18	0/0:0,0:1:0,3,18	0/1:0,3:7:84,0,12
+chr21	7232451	chr21:7232451:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:31,8,0	0/1:1,1:2:5,0,5	0/1:2,2:6:19,0,6
+chr21	7234039	chr21:7234039:M	TTGTGTTGTGT	<1.8>	.	.	Motif=TTGTG	GT:AD:DP:PL	0/1:59,17:76:237,0,255	0/0:49,0:49:0,147,255	0/1:43,46:89:255,0,255
+chr21	7257612	chr21:7257612:M	AGTGGAGTGGAGTGGAGTGGAGTTGATCAGAGTGCAGTGGAATTGAATGGAATGGACTGGAATGGAATAGAGTGGAGTGGAGGGGAGTGG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	0/1:2,12:14:102,0,11	1/1:1,13:14:128,14,0	1/1:1,14:15:140,16,0
+chr21	7258025	chr21:7258025:M	GGAATGGAAATGAATGGAATGGAATGGAATG	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:40,340:461:255,0,255	0/1:27,375:508:255,0,255	0/1:46,431:542:255,0,255
+chr21	7261697	chr21:7261697:M	GAATGGAATGGAATGGAGTGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	0/1:62,168:230:255,0,255	0/1:29,177:206:255,0,209	0/1:68,228:296:255,0,255
+chr21	7261758	chr21:7261758:M	AATGGAGTGGAATGGAAT	<27>	.	.	Motif=AATGG	GT:AD:DP:PL	0/1:148,167:315:255,0,255	0/1:123,177:300:255,0,255	0/1:130,225:355:255,0,255
+chr21	7261787	chr21:7261787:M	GAGTGGACTGGAGTGGAGTGGAGTTTAGTGGAGTG	<27>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:39,29:68:161,0,255	0/1:28,27:55:175,0,255	0/1:37,49:86:255,0,255
+chr21	7301246	chr21:7301246:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:37,17:56:12,0,207	1/1:3,26:31:219,50,0	0/0:50,1:63:0,147,255
+chr21	7304153	chr21:7304153:M	AAATAATAAATAAATAAATAAATAAA	<6>,<7.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:18,7,8:42:0,38,220,15,134,255	1/2:0,5,10:18:99,95,148,30,0,65	0/0:43,6,0:60:0,83,255,160,255,255
+chr21	7318946	chr21:7318946:M	AATAATAATAAAATAAAATAAAATAAAATAAA	<7.6>	.	.	Motif=AATAA	GT:AD:DP:PL	0/1:25,16:41:153,0,255	0/1:15,13:29:140,0,169	0/0:37,5:45:0,35,255
+chr21	7382758	chr21:7382758:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,2:9:9,0,95	0/1:14,9:23:83,0,165	1/1:0,3:3:52,9,0
+chr21	7388979	chr21:7388979:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,2,3:7:135,94,98,48,0,33	0/1:5,4,0:11:92,0,124,109,108,205	2/2:0,0,6:6:128,140,168,18,18,0
+chr21	7392735	chr21:7392735:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,14:20:215,7,0	0/1:4,16:21:207,0,3	1/1:2,15:17:214,17,0
+chr21	7397203	chr21:7397203:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:7:11,0,20	0/1:3,5:9:33,0,5	0/0:0,0:1:0,2,9
+chr21	7397834	chr21:7397834:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:13,0,13	0/0:6,2:11:0,4,44	1/1:0,5:6:56,15,0
+chr21	7398227	chr21:7398227:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3,0:9:32,0,55,25,38,48	0/2:6,1,3:10:11,14,102,0,46,31	0/1:1,2,0:3:28,0,10,17,8,19
+chr21	7412009	chr21:7412009:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:79,9,0	0/1:2,3:6:65,0,40	.
+chr21	7413015	chr21:7413015:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:21:255,56,0	0/1:2,9:14:147,0,8	1/1:0,24:25:255,74,0
+chr21	7429200	chr21:7429200:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,7:7:156,21,0	0/1:3,4:7:67,0,45	1/1:0,27:28:255,76,0
+chr21	7429591	chr21:7429591:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<23.7>,<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/2:0,0,2:7:90,20,5,71,0,65	1/2:0,0,2:3:39,20,17,19,0,13	1/2:0,3,4:7:115,40,31,75,0,63
+chr21	7432313	chr21:7432313:M	TTTTTTTTTTTT	<10>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,15,3:29:183,0,78,225,36,255	0/0:22,4,4:33:0,21,255,46,171,207	1/2:1,19,14:37:255,102,238,255,0,255
+chr21	7434399	chr21:7434399:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:19:238,0,107	0/1:3,5:9:114,0,49	0/1:4,6:13:136,0,70
+chr21	7434715	chr21:7434715:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:25:219,0,255	0/1:20,3:23:16,0,255	0/1:5,4:15:105,0,101
+chr21	7439461	chr21:7439461:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,8:14:156,0,55	1/1:0,2:2:44,6,0	1/1:2,15:17:255,4,0
+chr21	7440477	chr21:7440477:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:9,3:13:51,0,189	0/0:9,1:11:0,2,200	0/1:6,7:16:147,0,127
+chr21	7440948	chr21:7440948:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:9:54,0,144	0/1:3,0:6:20,0,76	0/1:2,3:7:96,0,34
+chr21	7441112	chr21:7441112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,18:32:183,0,122	0/1:7,6:13:51,0,66	0/1:12,16:29:158,0,108
+chr21	7455244	chr21:7455244:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAAAAA	<53>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:28,9,0	1/1:0,1:3:7,2,0	1/1:0,2:3:14,4,0
+chr21	7457885	chr21:7457885:M	TCTCTCTCTTTCTTTCTTTCCTTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:4,1:6:48,0,108	0/1:5,2:8:76,0,191	1/1:0,3:3:82,9,0
+chr21	7458909	chr21:7458909:M	TTTATTTATCTGTTTATTTACTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:10,1:11:0,16,144	0/1:7,3:10:18,0,79	0/1:4,2:6:14,0,45
+chr21	7459877	chr21:7459877:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,1:1:26,3,0	1/1:0,1:1:26,3,0	1/1:0,4:4:95,12,0
+chr21	7469308	chr21:7469308:M	AAAAAAAAAAAAA	<11>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8,3:17:91,0,42,50,1,193	0/2:4,0,3:9:81,94,148,0,63,77	0/2:4,3,2:14:50,28,88,0,20,92
+chr21	7475770	chr21:7475770:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,7:29:19,0,237	0/1:16,6:22:22,0,163	0/1:17,25:46:228,0,157
+chr21	7485387	chr21:7485387:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	0/0:14,3:18:0,13,144	0/0:20,0:21:0,57,248	0/1:14,6:20:17,0,113
+chr21	7490675	chr21:7490675:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	0/1:4,8:14:70,0,12	0/1:4,6:10:43,0,19	1/1:0,9:13:127,25,0
+chr21	7551450	chr21:7551450:M	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<7>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:3,9:12:107,0,12	1/1:2,12:14:151,10,0	1/1:0,27:27:255,78,0
+chr21	7561497	chr21:7561497:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,6:24:3,0,138	0/0:19,3:22:0,26,177	0/0:19,6:26:0,3,156
+chr21	7563872	chr21:7563872:M	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTGTTTTATTTTATTTTA	<10.4>	.	.	Motif=TATTT	GT:AD:DP:PL	0/1:3,5:8:40,0,15	0/1:3,2:5:11,0,23	0/1:4,3:9:22,0,27
+chr21	7567415	chr21:7567415:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,9:23:38,0,93	0/1:13,7:21:21,0,96	0/1:16,10:27:38,0,115
+chr21	7578497	chr21:7578497:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:20:0,54,232	0/1:10,5:15:18,0,77	0/1:7,5:16:57,0,41
+chr21	7586029	chr21:7586029:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:8:5,0,22	0/0:1,0:4:0,6,19	0/1:2,1:4:7,0,7
+chr21	7587421	chr21:7587421:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,3:21:0,3,255	0/1:7,3:11:28,0,105	0/1:8,4:17:34,0,147
+chr21	7607157	chr21:7607157:M	CACACACACACA	<7>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,9:31:66,0,255	0/0:32,5:39:0,31,255	0/0:39,4:44:0,61,255
+chr21	7607327	chr21:7607327:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,4:5:109,11,0	0/1:0,0:3:1,0,5
+chr21	7612522	chr21:7612522:M	AAAGAAAGAAAGAAAAAAGAAGAGAGAAAGAAAGAAGGAAAGAAAGAGAGAAAGAAAGAAGACAGAAAAGGAAAGAAAGAAAGAAA	<15.2>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,2:5:35,0,66	1/1:0,5:6:130,15,0	0/1:4,6:10:125,0,77
+chr21	7613641	chr21:7613641:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:11:6,0,112	0/1:2,3:6:38,0,20	0/1:6,2:8:11,0,82
+chr21	7636763	chr21:7636763:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,11:23:246,0,58	0/1:7,8:16:130,0,97	0/1:9,10:20:148,0,140
+chr21	7647685	chr21:7647685:M	ATAATCATAATCATAATCATAATCATAATCATAATCATAATCATAA	<6.7>,<8.7>	.	.	Motif=ATAATC	GT:AD:DP:PL	1/1:2,9,1:17:121,8,0,150,21,255	0/1:4,11,0:18:111,0,1,155,41,255	1/2:0,7,3:10:94,35,40,84,0,134
+chr21	7662620	chr21:7662620:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:25:0,71,255	0/0:21,4:25:0,15,240	0/1:12,13:27:110,0,118
+chr21	7669085	chr21:7669085:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,1:18:0,19,162	0/0:9,0:10:0,26,144	0/1:6,6:17:51,0,100
+chr21	7756074	chr21:7756074:M	AAAAAAAAAAAACAAAAAAAACCAAAAAAAAAAACCAAAAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,3:11:20,0,108	0/0:20,0:22:0,64,255	0/0:17,1:18:0,36,255
+chr21	7762615	chr21:7762615:M	ACACACACACACACACACACACCGCACACACACACA	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,255	0/1:7,5:12:54,0,90	0/0:16,0:17:0,50,255
+chr21	7772844	chr21:7772844:M	AAAAAAAGAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:13:56,0,115	0/1:8,10:18:127,0,91	0/1:10,7:18:87,0,134
+chr21	7773308	chr21:7773308:M	TTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:19:246,0,140	0/1:6,9:16:195,0,131	0/1:12,8:21:155,0,255
+chr21	7784201	chr21:7784201:M	CACACACACGCGCACACACACACACACACACACACACACACACACACACA	<26>	.	.	Motif=CA	GT:AD:DP:PL	0/1:8,5:13:51,0,104	0/1:0,1:2:11,0,5	0/0:9,0:10:0,29,167
+chr21	7788458	chr21:7788458:M	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	<6.2>,<9.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/2:0,2,3:5:103,57,75,54,0,45	0/1:5,5,0:10:117,0,116,131,89,208	1/2:0,4,8:12:235,148,197,107,0,84
+chr21	7788509	chr21:7788509:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:24,0,16	0/0:6,0:7:0,19,78	0/1:2,3:5:21,0,9
+chr21	7801440	chr21:7801440:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8:20:128,0,131	0/1:14,9:24:93,0,196	0/1:12,12:26:166,0,161
+chr21	7809419	chr21:7809419:M	TGTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,10:21:136,0,123	0/1:5,4:9:44,0,61	0/1:8,4:12:36,0,109
+chr21	7814549	chr21:7814549:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:9:59,0,116	0/0:3,0:5:0,9,83	0/0:8,0:8:0,24,223
+chr21	7820840	chr21:7820840:M	TTTATTTATTTATTTATTTATTTATTTA	<11>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/1:10,4:14:71,0,239	0/0:17,0:17:0,51,255
+chr21	7822727	chr21:7822727:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,16:22:230,0,37	0/1:10,13:23:160,0,107	0/0:15,0:15:0,44,255
+chr21	7825171	chr21:7825171:M	AAAAAAAAAAAAAAAGAAACAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:12:105,0,4	1/1:1,9:10:128,13,0	0/1:12,13:27:141,0,124
+chr21	7839019	chr21:7839019:M	AAACAAACAAACAAACA	<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,20:20:255,60,0	0/1:11,9:20:193,0,250
+chr21	7847038	chr21:7847038:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,21:21:255,62,0	0/1:13,14:27:187,0,165
+chr21	7851469	chr21:7851469:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:30,0,6	1/1:0,3:3:48,9,0	1/1:1,5:6:67,1,0
+chr21	7860950	chr21:7860950:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:11,0:11:0,33,210	0/0:13,0:14:0,41,244	0/1:3,6:10:83,0,36
+chr21	7915776	chr21:7915776:M	ATTCCATTCCATTC	<27>	.	.	Motif=ATTCC	GT:AD:DP:PL	0/1:119,133:252:255,0,255	0/1:132,147:279:255,0,255	0/1:124,135:259:255,0,255
+chr21	7915808	chr21:7915808:M	TCCATTCCATTCCTTTCCATTCC	<27>	.	.	Motif=TCCAT	GT:AD:DP:PL	0/1:70,134:204:255,0,255	0/1:64,148:212:255,0,255	0/1:62,136:198:255,0,255
+chr21	7957981	chr21:7957981:M	TTCCATTCCACTCCACTCAATTCCATTCCCTTCCATTCTGTTCCATTCCGTTTCATTCCA	<27>	.	.	Motif=TTCCA	GT:AD:DP:PL	0/1:49,52:103:255,0,255	0/1:66,68:135:255,0,255	0/1:62,44:108:219,0,255
+chr21	8108887	chr21:8108887:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:7:0,17,60	0/0:5,1:9:0,10,51	0/1:2,3:8:8,0,22
+chr21	8109940	chr21:8109940:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,3:3:89,9,0	1/1:0,3:3:90,9,0	1/1:0,5:5:156,15,0
+chr21	8113624	chr21:8113624:M	ATATAAATATACATATATATAT	<3.5>	.	.	Motif=ATATAA	GT:AD:DP:PL	0/0:20,0:20:0,57,255	0/1:12,4:16:13,0,131	0/1:27,9:36:29,0,255
+chr21	8127279	chr21:8127279:M	TTTTTTTTTTTTTTGTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:35:0,36,226	0/1:16,8:29:47,0,78	0/0:27,0:38:0,6,170
+chr21	8144024	chr21:8144024:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:20,2:22:0,36,219	0/1:14,6:20:17,0,112	0/1:5,6:12:50,0,27
+chr21	8155122	chr21:8155122:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,3:19:0,17,146	0/1:12,5:19:5,0,102	0/1:15,8:24:25,0,113
+chr21	8158619	chr21:8158619:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:4,4:8:27,0,27	0/1:1,1:2:7,0,7	0/1:1,1:3:9,0,5
+chr21	8161040	chr21:8161040:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,5:18:8,0,98	0/0:17,4:21:0,12,144	0/0:14,2:17:0,23,144
+chr21	8171058	chr21:8171058:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:1,8:10:95,12,0	1/1:4,19:23:198,12,0	1/1:0,14:14:188,39,0
+chr21	8172081	chr21:8172081:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:24:144,0,145	0/1:5,15:21:205,0,24	0/1:6,16:23:224,0,38
+chr21	8182202	chr21:8182202:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:30,0,44	0/1:6,2:8:3,0,52	0/1:7,4:11:20,0,57
+chr21	8188839	chr21:8188839:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,3:26:0,24,255	0/1:9,4:14:30,0,111	0/0:24,3:27:0,27,255
+chr21	8192437	chr21:8192437:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:34:46,0,255	0/1:11,13:28:152,0,109	0/0:37,6:45:0,30,255
+chr21	8195715	chr21:8195715:M	TTTTTTTTTTTTTTTTTTTTCTTTTTT	<28>,<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,14,2:20:199,0,9,161,33,253	0/2:3,3,3:9:62,7,30,0,7,62	0/1:4,10,2:18:142,0,19,95,24,183
+chr21	8200710	chr21:8200710:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:9:24,0,74	0/0:5,0:5:0,15,80	0/1:2,3:5:35,0,18
+chr21	8202105	chr21:8202105:M	AAGAAAAGAAAA	<27>	.	.	Motif=AAGAA	GT:AD:DP:PL	0/0:16,1:17:0,39,255	0/1:12,9:21:46,0,255	0/0:18,4:22:0,18,255
+chr21	8202867	chr21:8202867:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<17.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:67,39:212:229,0,255	0/1:129,51:302:129,0,255	0/1:34,58:182:255,0,255
+chr21	8204667	chr21:8204667:M	CCTCCCTCCCTCCCTCCCTCCCTCCCTGCTCCCTTCCCTCCCTCCTTCCCT	<14.8>	.	.	Motif=CCTC	GT:AD:DP:PL	0/1:58,10:76:41,0,255	0/0:49,0:60:0,170,255	0/1:29,10:39:136,0,255
+chr21	8211687	chr21:8211687:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>,<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:171,195,122:584:255,0,255,255,255,255	0/2:209,195,225:797:255,255,255,0,255,255	0/1:257,297,146:815:255,0,255,255,255,255
+chr21	8212486	chr21:8212486:M	GGGGGGGGGCGGGGGG	<15>	.	.	Motif=G	GT:AD:DP:PL	1/1:4,2277:2447:255,255,0	1/1:5,2047:2290:255,255,0	1/1:21,3722:3839:255,255,0
+chr21	8213330	chr21:8213330:M	CCTCCTCCTCC	<3.3>	.	.	Motif=CCT	GT:AD:DP:PL	0/1:121,96:217:255,0,255	0/1:117,86:203:255,0,255	0/1:89,178:267:255,0,255
+chr21	8214735	chr21:8214735:M	GGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG	<10.7>,<11.7>	.	.	Motif=GGC	GT:AD:DP:PL	0/1:137,165,86:499:255,0,255,255,255,255	0/1:157,129,66:435:255,0,255,255,255,255	0/2:143,35,154:353:255,255,255,0,255,255
+chr21	8216067	chr21:8216067:M	CCCCCGCCCCCCCCCC	<17>	.	.	Motif=C	GT:AD:DP:PL	0/1:99,38:142:229,0,255	0/1:133,31:169:3,0,255	0/1:112,26:142:16,0,255
+chr21	8217209	chr21:8217209:M	CCCCCCCCCACCCCAC	<3>	.	.	Motif=CCCCA	GT:AD:DP:PL	1/1:25,214:304:255,255,0	0/1:36,83:140:255,0,60	1/1:23,210:280:255,255,0
+chr21	8218942	chr21:8218942:M	CGCGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:1596,264:2059:255,0,255	0/1:1183,547:1917:255,0,255	0/1:2634,345:3129:255,0,255
+chr21	8219904	chr21:8219904:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCT	<11.5>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:426,375:1393:255,0,255	0/1:343,594:1622:255,0,255	0/1:734,217:1652:255,0,255
+chr21	8220187	chr21:8220187:M	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	<6.2>,<7.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:8,220,368:1221:255,255,255,255,0,255	1/2:4,573,642:1580:255,255,255,255,0,255	1/2:7,569,333:1565:255,255,255,255,0,255
+chr21	8220689	chr21:8220689:M	TTTTTTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:164,99:387:255,0,255	0/1:58,70:304:255,0,255	0/0:321,13:459:0,255,255
+chr21	8220758	chr21:8220758:M	TCTCGCTCTCGCTCTC	<1.3>	.	.	Motif=TCTCGC	GT:AD:DP:PL	0/1:1930,646:2576:255,0,255	0/1:1973,593:2567:255,0,255	0/0:2435,288:2728:0,255,255
+chr21	8221788	chr21:8221788:M	ACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<30>	.	.	Motif=AC	GT:AD:DP:PL	0/1:50,95:371:255,0,255	0/1:48,30:368:255,0,255	0/1:131,98:503:255,0,255
+chr21	8222183	chr21:8222183:M	GGTGGGGTGGGGTG	<5.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,1:4:25,0,30	1/1:0,4:4:110,12,0
+chr21	8222330	chr21:8222330:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<11>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:46,66:367:255,0,255	0/1:31,159:371:255,0,255	0/1:179,30:376:255,0,255
+chr21	8222802	chr21:8222802:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<13.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:27,172,163:545:255,255,255,255,0,255	1/2:53,236,82:707:255,255,255,255,0,255	0/2:156,50,131:676:255,255,255,0,255,255
+chr21	8223498	chr21:8223498:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<11.7>,<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/2:0,11,18:47:255,255,255,255,0,255	1/2:1,7,10:26:255,255,255,234,0,199	2/2:0,2,32:52:255,255,255,97,14,0
+chr21	8224496	chr21:8224496:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<19>	.	.	Motif=TC	GT:AD:DP:PL	0/1:249,306:1763:255,0,255	0/1:177,719:2098:255,0,255	0/1:259,102:1844:255,0,255
+chr21	8225211	chr21:8225211:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<11.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:718,133:1129:255,0,255	0/1:480,175:925:255,0,255	0/1:463,279:1104:255,0,255
+chr21	8226071	chr21:8226071:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<14.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:304,564:1442:255,0,255	0/1:481,795:1718:255,0,255	0/1:324,930:2005:255,0,255
+chr21	8228131	chr21:8228131:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,112,57:175:255,255,255,255,0,255	1/2:0,90,44:144:255,255,255,255,0,255	1/2:0,149,55:210:255,255,255,255,0,255
+chr21	8231395	chr21:8231395:M	GAGAAGAGAGGAGAGAGAGAGAGAGACGGGGAGAGAGGGGGGAGAGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGA	<67.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,187:187:255,255,0	1/1:0,189:195:255,255,0	1/1:0,166:172:255,255,0
+chr21	8239234	chr21:8239234:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,3:13:168,95,80,58,0,39	1/2:1,2,7:13:228,171,186,24,0,24	1/2:0,4,4:11:212,103,87,103,0,88
+chr21	8243074	chr21:8243074:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:17,43:87:255,0,245	0/1:13,39:70:255,0,223	1/1:9,90:119:255,73,0
+chr21	8245701	chr21:8245701:M	ATACAATACAATACGATACGATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATAC	<12.8>	.	.	Motif=ATACA	GT:AD:DP:PL	0/1:54,195:337:255,0,255	0/1:27,165:446:255,0,255	0/1:77,160:393:255,0,255
+chr21	8246914	chr21:8246914:M	TTTCTTTCTTTCTTTCTTTATTACTTTCTCTTTTTCTT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:964,316:1292:255,0,255	0/1:943,415:1370:255,0,255	0/1:1109,542:1674:255,0,255
+chr21	8247291	chr21:8247291:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:37,72:279:255,0,255	0/1:28,26:219:255,0,255	0/1:59,64:328:255,0,255
+chr21	8253488	chr21:8253488:M	CGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:17,4:21:6,0,217	0/1:13,12:26:119,0,131	0/0:16,0:16:0,47,255
+chr21	8253712	chr21:8253712:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:34,19:59:255,0,255	0/1:86,21:125:194,0,255	0/1:19,16:44:255,0,255
+chr21	8255893	chr21:8255893:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/1:51,90:212:255,0,255	0/1:101,92:304:255,0,255	0/1:138,117:362:255,0,255
+chr21	8256698	chr21:8256698:M	GGGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:3,13:18:255,0,39	0/1:4,6:11:119,0,81	0/1:3,1:4:16,0,67
+chr21	8327069	chr21:8327069:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:21,3:25:0,32,229	0/1:16,8:24:29,0,125	0/1:4,5:9:35,0,23
+chr21	8338167	chr21:8338167:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,5:23:0,7,142	0/1:6,4:11:14,0,45	0/1:12,11:24:56,0,76
+chr21	8339267	chr21:8339267:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/0:26,3:29:0,40,255	0/0:31,1:32:0,77,255	0/1:30,10:40:29,0,255
+chr21	8341664	chr21:8341664:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:3,4:8:32,0,16	0/1:2,3:5:22,0,10	0/1:1,0:3:2,0,6
+chr21	8344085	chr21:8344085:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,9:26:42,0,111	0/0:26,4:30:0,36,246	0/1:18,10:29:35,0,135
+chr21	8354103	chr21:8354103:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:0,8:10:110,23,0	0/1:6,15:21:141,0,21	1/1:0,15:15:204,42,0
+chr21	8355126	chr21:8355126:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,11:21:145,0,100	0/1:11,13:24:152,0,118	0/1:7,11:18:140,0,70
+chr21	8375482	chr21:8375482:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,11:41:74,0,255	0/1:18,11:33:113,0,204	0/0:39,2:43:0,92,255
+chr21	8377740	chr21:8377740:M	TTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:71,0,44	0/1:5,1:8:10,0,134	0/0:5,0:9:0,26,204
+chr21	8378760	chr21:8378760:M	TTTTTTTTTTTTTTTTTTTTCTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10,2:21:116,0,80,106,73,255	0/2:3,1,3:8:74,59,91,0,29,74	0/1:9,8,0:18:91,0,96,131,145,255
+chr21	8383755	chr21:8383755:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:16:15,0,154	0/1:8,6:16:62,0,85	0/0:11,2:13:0,5,147
+chr21	8385914	chr21:8385914:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<17.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:64,58:227:255,0,255	0/1:111,59:296:255,0,255	0/1:31,57:178:255,0,255
+chr21	8392532	chr21:8392532:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:21,6:28:81,0,255	0/1:94,20:115:162,0,255	0/1:33,15:53:246,0,255
+chr21	8394722	chr21:8394722:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>,<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:170,179,120:554:255,0,255,255,255,255	0/2:211,203,214:784:255,255,255,0,255,255	0/1:282,344,149:888:255,0,255,255,255,255
+chr21	8395521	chr21:8395521:M	GGGGGGGGGCGGGGGG	<15>	.	.	Motif=G	GT:AD:DP:PL	1/1:5,2318:2504:255,255,0	1/1:10,2064:2322:255,255,0	1/1:18,3744:3867:255,255,0
+chr21	8397769	chr21:8397769:M	GGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG	<10.7>,<11.7>	.	.	Motif=GGC	GT:AD:DP:PL	0/1:38,28,20:109:255,0,255,255,255,255	0/1:38,30,10:93:255,0,255,255,255,255	0/2:28,12,31:78:255,220,255,0,255,255
+chr21	8399101	chr21:8399101:M	CCCCCGCCCCCCCCCC	<17>	.	.	Motif=C	GT:AD:DP:PL	0/1:134,47:184:244,0,255	0/0:195,23:233:0,255,255	0/1:124,29:159:9,0,255
+chr21	8400242	chr21:8400242:M	CCCCCCCCCCCACCCC	<15>,<20>	.	.	Motif=C	GT:AD:DP:PL	1/2:16,62,47:173:255,255,255,255,0,255	0/2:88,40,61:235:255,255,255,0,255,255	1/2:24,44,74:194:255,255,255,255,0,255
+chr21	8402416	chr21:8402416:M	CTCTCGCTCTCTCTCTGTCTCT	<67.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,44:44:255,121,0	1/1:0,40:40:255,110,0	1/1:0,20:20:237,55,0
+chr21	8402454	chr21:8402454:M	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	<7.2>,<8.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:0,32,30:91:255,255,255,255,0,255	1/2:0,80,37:171:255,255,169,255,0,255	1/2:0,53,22:129:255,255,118,255,0,255
+chr21	8402956	chr21:8402956:M	TTTTTTTTTTTTTTTTTTT	<24>,<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,29,18,20:76:255,255,255,255,80,255,255,0,233,255	1/3:0,31,40,55:141:255,255,255,255,255,255,255,0,2,255	1/3:0,58,17,50:147:255,255,255,255,255,255,255,0,255,255
+chr21	8402972	chr21:8402972:M	TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,41:41:255,112,0	1/1:0,79:79:255,216,0	1/1:0,51:51:255,140,0
+chr21	8403707	chr21:8403707:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:20,33:85:206,0,255	0/1:15,82:128:255,0,237	0/1:25,44:80:255,0,255
+chr21	8404787	chr21:8404787:M	ACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<30>	.	.	Motif=AC	GT:AD:DP:PL	0/1:32,92:353:255,0,255	0/1:59,51:407:255,0,255	0/1:109,86:460:255,0,255
+chr21	8405182	chr21:8405182:M	GGTGGGGTGGGGTG	<5.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	0/1:0,1:2:22,0,11	0/1:0,0:3:4,0,22	0/1:1,4:6:100,0,23
+chr21	8405329	chr21:8405329:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<12>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:45,120:317:255,0,255	0/1:41,72:305:255,0,255	0/1:212,49:396:255,0,255
+chr21	8405574	chr21:8405574:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<27.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:145,321:869:255,0,255	0/1:178,287:861:255,0,255	0/1:107,56:842:255,0,255
+chr21	8405801	chr21:8405801:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<13.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:40,111,194:576:255,255,255,255,0,255	1/2:70,227,119:809:255,255,255,255,0,255	1/2:166,47,151:808:255,255,255,205,0,255
+chr21	8406497	chr21:8406497:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<11.7>,<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/2:0,10,9:32:255,247,209,255,0,255	1/2:0,7,8:27:255,221,220,204,0,185	2/2:0,0,24:36:255,255,255,65,5,0
+chr21	8407495	chr21:8407495:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<19>	.	.	Motif=TC	GT:AD:DP:PL	0/1:256,282:1794:255,0,255	0/1:188,721:2125:255,0,255	0/1:253,120:1808:255,0,255
+chr21	8408210	chr21:8408210:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<11.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:706,131:1121:255,0,255	0/1:540,198:1000:255,0,255	0/1:463,283:1094:255,0,255
+chr21	8409070	chr21:8409070:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<14.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:271,550:1400:255,0,255	0/1:501,750:1690:255,0,255	0/1:339,888:1944:255,0,255
+chr21	8411130	chr21:8411130:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,96,45:143:255,255,255,255,0,255	1/2:0,88,49:146:255,255,255,255,0,255	1/2:0,129,58:192:255,255,255,255,0,255
+chr21	8422258	chr21:8422258:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,0:3:8,10,37,0,28,25	1/2:0,2,3:5:131,79,73,51,0,42	1/1:0,3,0:5:91,10,0,79,0,77
+chr21	8426098	chr21:8426098:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:19,41:93:255,0,255	0/1:9,48:81:255,0,94	1/1:11,106:145:255,81,0
+chr21	8428725	chr21:8428725:M	ATACAATACAATACGATACGATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATAC	<12.8>	.	.	Motif=ATACA	GT:AD:DP:PL	0/1:51,197:347:255,0,255	0/1:50,167:477:255,0,255	0/1:92,234:474:255,0,255
+chr21	8429938	chr21:8429938:M	TTTCTTTCTTTCTTTCTTTATTACTTTCTCTTTTTCTT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:978,337:1326:255,0,255	0/1:906,441:1360:255,0,255	0/1:1156,522:1693:255,0,255
+chr21	8429966	chr21:8429966:M	TCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	<17.3>	.	.	Motif=TCT	GT:AD:DP:PL	0/1:118,119:460:255,0,255	0/1:83,57:501:255,0,255	0/1:175,122:1001:255,0,255
+chr21	8430315	chr21:8430315:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:45,68:256:255,0,255	0/1:20,17:185:255,0,255	0/1:66,58:322:255,0,255
+chr21	8432061	chr21:8432061:M	CTCCCTCCCTCACTCCCTCCCTCCCTCCCTCCCT	<5.5>,<7.5>	.	.	Motif=CTCC	GT:AD:DP:PL	2/2:0,0,13:14:218,254,255,38,39,0	0/2:1,0,1:2:10,16,52,0,16,10	1/2:0,9,4:14:255,68,72,230,0,210
+chr21	8436522	chr21:8436522:M	CGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/0:16,3:19:0,5,209	0/1:7,9:16:97,0,65	0/0:20,3:24:0,16,255
+chr21	8436746	chr21:8436746:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:18,16:40:255,0,255	0/1:130,31:178:255,0,255	0/1:18,18:42:255,0,255
+chr21	8438935	chr21:8438935:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/1:137,245:599:255,0,255	0/1:219,262:778:255,0,255	0/1:336,354:959:255,0,255
+chr21	8439740	chr21:8439740:M	GGGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:4,4:8:86,0,86	0/1:3,3:7:69,0,58	0/0:4,0:5:0,12,112
+chr21	8443335	chr21:8443335:M	CCCCCGCCCCCCCCCCC	<16>	.	.	Motif=C	GT:AD:DP:PL	0/1:106,59:231:255,0,255	0/1:127,34:215:198,0,255	0/1:183,88:342:255,0,255
+chr21	8444477	chr21:8444477:M	CCCCCCCCCCCACCCC	<15>,<20>	.	.	Motif=C	GT:AD:DP:PL	1/2:20,56,31:153:255,255,255,255,0,255	0/2:79,32,53:215:255,255,255,0,255,255	1/2:21,39,88:211:255,255,255,255,0,255
+chr21	8446212	chr21:8446212:M	CGCGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:1560,268:2085:255,0,255	0/1:1181,564:1930:255,0,255	0/0:2660,329:3158:0,194,255
+chr21	8447163	chr21:8447163:M	TTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:16:255,7,0	0/1:2,12:56:255,0,17	1/1:0,40:70:255,169,0
+chr21	8447179	chr21:8447179:M	TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,30:30:255,86,0	1/1:0,40:47:255,104,0	1/1:0,8:14:112,19,0
+chr21	8447235	chr21:8447235:M	CGCTCTCGCTCTC	<1.7>,<2.3>	.	.	Motif=CGCTCT	GT:AD:DP:PL	1/2:0,3,2:5:90,24,39,71,0,66	.	1/2:0,8,4:12:237,49,79,200,0,191
+chr21	8447914	chr21:8447914:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:17,24:78:186,0,255	0/1:11,49:89:255,0,255	0/1:20,8:48:17,0,255
+chr21	8448628	chr21:8448628:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:26,28:107:255,0,255	0/1:22,29:173:255,0,255	0/0:33,0:209:0,198,255
+chr21	8449389	chr21:8449389:M	GGTGGGGTGGGGTG	<3.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	0/1:1,1:4:9,0,17	0/1:2,0:4:4,0,23	0/1:2,3:6:36,0,18
+chr21	8449536	chr21:8449536:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<16>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:32,27:96:255,0,255	0/1:36,31:104:255,0,255	0/0:164,16:209:0,255,255
+chr21	8449781	chr21:8449781:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:58,69:186:255,0,255	0/1:150,43:237:157,0,255	0/1:35,58:203:255,0,255
+chr21	8449827	chr21:8449827:M	TGTATCTATGTATGTATGTATGTATGT	<9.2>	.	.	Motif=TGTA	GT:AD:DP:PL	1/1:0,1:2:34,5,0	0/1:2,3:8:69,0,75	1/1:0,1:3:43,7,0
+chr21	8449996	chr21:8449996:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<11.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:196,131,278:795:255,255,255,184,0,255	1/2:87,234,167:728:255,255,255,255,0,255	0/2:375,52,253:1090:255,255,255,0,255,255
+chr21	8450684	chr21:8450684:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/1:0,19:35:255,73,0	1/1:0,17:37:255,68,0	1/1:4,32:49:255,8,0
+chr21	8451682	chr21:8451682:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<14>,<17>	.	.	Motif=TC	GT:AD:DP:PL	1/2:14,508,30:654:255,255,196,255,0,255	1/2:34,142,150:424:255,255,255,255,0,255	1/2:8,533,25:724:255,255,255,255,0,255
+chr21	8452385	chr21:8452385:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<6.8>,<8.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:53,67,6:223:255,0,255,255,255,255	1/2:79,62,172:468:255,255,255,255,0,255	0/2:102,29,120:358:255,255,255,0,255,255
+chr21	8452413	chr21:8452413:M	TTTCTTTTTCTTTTTCT	<1.8>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/0:810,10:820:0,255,255	0/1:787,353:1140:255,0,255	0/0:934,198:1133:0,49,255
+chr21	8453237	chr21:8453237:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<11.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:250,37:293:0,214,255	0/1:38,37:78:255,0,255	0/1:201,159:365:255,0,255
+chr21	8455277	chr21:8455277:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,104,65:172:255,255,255,255,0,255	1/2:0,100,61:172:255,255,255,255,0,255	1/2:0,129,73:208:255,255,255,255,0,255
+chr21	8465015	chr21:8465015:M	GTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,24,1:60:255,0,22,255,50,255	1/2:9,24,54:121:255,255,255,165,0,173	1/1:0,46,1:56:255,148,0,255,130,255
+chr21	8466840	chr21:8466840:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:66,37:129:255,0,255	0/1:33,13:97:246,0,255	0/1:96,66:201:255,0,255
+chr21	8470659	chr21:8470659:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:19,32:83:255,0,255	0/1:11,34:61:255,0,147	1/1:8,90:117:255,95,0
+chr21	8523526	chr21:8523526:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:23:130,0,119	0/1:22,10:32:69,0,255	0/0:40,1:59:0,153,255
+chr21	8527356	chr21:8527356:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,25:33:255,0,23	1/1:8,36:44:255,0,0	0/1:33,22:56:207,0,255
+chr21	8538019	chr21:8538019:M	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<11.8>	.	.	Motif=GAAG	GT:AD:DP:PL	0/0:3,0:4:0,0,39	0/1:5,3:10:25,0,57	0/0:13,1:17:0,11,192
+chr21	8539043	chr21:8539043:M	TGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:1,0:4:0,9,58	0/0:2,0:4:0,6,57	0/1:9,4:16:77,0,220
+chr21	8557646	chr21:8557646:M	TTTTTTTGTTTTGTTTTGTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:66,0,40	0/1:4,6:10:134,0,80	0/1:19,7:27:110,0,255
+chr21	8558574	chr21:8558574:M	GTGTGTGTCTGTGTGTGTGAGAGAGTGTGTGGTTTGTGTGT	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,4:23:2,0,235	0/1:19,7:27:36,0,228	0/0:34,5:39:0,32,255
+chr21	8558996	chr21:8558996:M	ATATATATATATATATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/0:28,0:30:0,87,255	0/1:20,7:27:36,0,250
+chr21	8580414	chr21:8580414:M	AGACAAGACAAGA	<1.6>	.	.	Motif=AGACA	GT:AD:DP:PL	0/1:17,5:22:73,0,255	0/0:29,1:30:0,62,255	0/1:29,11:40:179,0,255
+chr21	8582351	chr21:8582351:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:23:25,0,203	0/1:10,25:35:255,0,55	0/0:30,2:32:0,61,255
+chr21	8584854	chr21:8584854:M	GAAAGAAAGAAAGAAGGAAAGAAGGAAGGAAGGAAAAAAAAGAAAGAAAAGAAAGAAAGGAAAAGAAAAAAGAAAAGAAA	<19.8>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,2:3:20,6,0	1/1:0,3:4:21,7,0	0/0:2,0:2:0,4,14
+chr21	8584947	chr21:8584947:M	GAAGAAAGGAAGGAAGAAGGCAAGGGAAGGGAAGAGAAGAGAAAGGAAGATGGAAAGAAGGAAGGAAG	<12.5>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:7,3:10:46,0,142	0/0:10,0:10:0,30,250	0/0:19,1:20:0,36,255
+chr21	8590466	chr21:8590466:M	GGGGGGGGGGGGG	<11>,<12>	.	.	Motif=G	GT:AD:DP:PL	2/2:1,1,11:13:172,150,172,22,22,0	2/2:1,0,13:14:185,188,211,25,40,0	1/2:0,28,9:38:255,108,35,255,0,255
+chr21	8591042	chr21:8591042:M	TTCTTCCTCTTCCTTTCTCTTCTTCTT	<7.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:14,8:24:92,0,202	0/1:15,13:29:168,0,201	0/0:30,0:34:0,84,255
+chr21	8598361	chr21:8598361:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:0,9:11:123,0,0	0/1:4,11:21:161,0,65	0/1:16,5:23:21,0,227
+chr21	8600957	chr21:8600957:M	ATATACATATTGCAATATACATATA	<1.8>	.	.	Motif=ATATAC	GT:AD:DP:PL	0/0:14,1:15:0,18,255	0/1:23,4:27:26,0,255	0/1:18,7:25:108,0,255
+chr21	8618445	chr21:8618445:M	TATATATATAAAATATATATATATATATATA	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,12:13:167,22,0	0/1:1,0:2:6,0,9	0/1:6,5:11:43,0,58
+chr21	8643027	chr21:8643027:M	ATAGACAGATAGATAGATAGATAGATAGATAAGGTAGATAG	<11.2>	.	.	Motif=ATAG	GT:AD:DP:PL	.	.	1/1:0,6:8:110,18,0
+chr21	8651787	chr21:8651787:M	CCGCCGCGCCGCCGCTGTCCGCCTCTCCGCCGCGCCGCCGCTGTCCGCCTCTCCGCCGCGCCGCCGC	<5>	.	.	Motif=CCG	GT:AD:DP:PL	1/1:0,1:2:28,3,0	1/1:0,4:5:114,12,0	0/1:1,3:4:85,0,14
+chr21	8656862	chr21:8656862:M	GGCCGTGGCCGTGGCCCTGGCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGCCCTGCCCTGGCCCT	<7.7>	.	.	Motif=GGCCCT	GT:AD:DP:PL	0/1:1,3:4:74,0,14	0/1:1,5:6:126,0,8	0/0:1,0:1:0,3,23
+chr21	8658750	chr21:8658750:M	AGGGTCAGGGCCAGGG	<22.5>	.	.	Motif=AGGGCC	GT:AD:DP:PL	0/0:16,0:16:0,48,255	0/0:23,0:23:0,69,255	0/1:7,4:11:15,0,147
+chr21	8659331	chr21:8659331:M	GGGCCAGGGCCAAGGCAGGGCCAG	<22.5>	.	.	Motif=GGGCCA	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/0:26,1:27:0,69,255	0/1:5,4:9:21,0,109
+chr21	8660483	chr21:8660483:M	GCCCCGCCCTACCCTGGCCTTGCCCTGCCCTGGCCCTGCC	<4.8>	.	.	Motif=GCCCT	GT:AD:DP:PL	0/1:7,1:9:1,0,161	0/1:7,4:11:67,0,156	0/1:1,1:3:19,0,18
+chr21	8661284	chr21:8661284:M	ATTTTTATTTTTA	<22.5>	.	.	Motif=ATTTTT	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:35,0:35:0,105,255	0/1:9,21:30:164,0,167
+chr21	8661972	chr21:8661972:M	CATTTCATTTCAT	<27>	.	.	Motif=CATTT	GT:AD:DP:PL	0/1:7,4:11:16,0,164	0/1:5,2:7:3,0,119	1/1:11,169:180:255,189,0
+chr21	8662029	chr21:8662029:M	TGAGATGAGATGAAATGACAAAATGATGAGATGAGATGAGATGATGAGATGA	<27>	.	.	Motif=TGAGA	GT:AD:DP:PL	0/1:4,2:6:7,0,89	0/1:1,3:4:25,0,15	0/1:1,7:8:62,0,4
+chr21	8662161	chr21:8662161:M	GAGATGAGATGAGTTAAAATGAGATGAAATGATGAGATGA	<3.8>,<27>	.	.	Motif=GAGAT	GT:AD:DP:PL	0/0:11,0,2:13:0,33,255,12,255,255	0/2:9,0,3:12:5,32,252,0,220,212	1/2:3,4,7:14:159,1,63,93,0,147
+chr21	8664794	chr21:8664794:M	GATGAGATGAGATTTGATGAAATGATGAGATGAAATGATGAGATGATATGAAATGATGAGATGAGATGGGATAAGATGAAATGA	<27>	.	.	Motif=GATGA	GT:AD:DP:PL	.	.	1/1:0,3:3:36,8,0
+chr21	8671550	chr21:8671550:M	CCCCACCCCAC	<2.4>	.	.	Motif=CCCCA	GT:AD:DP:PL	0/0:16,3:19:0,19,136	0/0:18,4:22:0,16,146	0/1:20,9:29:17,0,133
+chr21	8674134	chr21:8674134:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:80,9,0	1/1:0,6:6:158,18,0	0/1:10,2:14:13,0,247
+chr21	8681520	chr21:8681520:M	GGAAGGAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGGAAGGAAGGAAG	<14.2>	.	.	Motif=GGAA	GT:AD:DP:PL	0/1:2,0:3:6,0,34	0/1:1,0:3:20,0,12	0/1:12,12:26:190,0,182
+chr21	8682753	chr21:8682753:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,1,3	0/0:1,0:2:0,6,46	1/1:0,3:3:80,9,0
+chr21	8684339	chr21:8684339:M	TGTGCGTGTGTGTGTGGGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG	<13.5>	.	.	Motif=TGTG	GT:AD:DP:PL	0/1:6,4:11:59,0,109	0/1:7,3:11:53,0,126	0/1:12,5:19:92,0,218
+chr21	8684707	chr21:8684707:M	AAAATAAAATAAAA	<1.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:77,6:83:0,156,255	0/1:73,27:100:37,0,255	0/0:107,18:125:0,131,255
+chr21	8685216	chr21:8685216:M	GACAAAGACAAA	<2.2>	.	.	Motif=GACAAA	GT:AD:DP:PL	1/1:0,3:5:69,14,0	1/1:0,9:10:149,29,0	0/1:18,5:23:10,0,211
+chr21	8686014	chr21:8686014:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAA	<29>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:64,40,36,28,0,90	1/2:0,3,1:8:68,42,32,36,0,85	1/2:1,5,9:21:235,206,217,27,0,132
+chr21	8690190	chr21:8690190:M	AAAAAAAAAAAAAAAAAGAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,16,9:29:255,37,54,127,0,92	1/2:5,14,10:31:255,23,78,92,0,74	0/2:11,5,10:28:87,23,205,0,61,51
+chr21	8690516	chr21:8690516:M	TTTTTTCTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,3,22:29:255,196,224,46,31,0	1/2:3,12,13:34:235,33,125,51,0,49	0/2:12,3,32:54:255,239,255,0,146,51
+chr21	8690764	chr21:8690764:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10:20:219,0,151	0/1:6,8:18:165,0,150	0/1:18,5:28:61,0,255
+chr21	8691722	chr21:8691722:M	TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATATA	<21>,<25>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,3:4:128,101,96,12,9,0	.	1/1:0,4,0:5:157,12,0,149,12,144
+chr21	8695282	chr21:8695282:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,26,28:59:255,255,158,255,0,112	1/2:5,28,16:64:255,76,151,178,0,124	0/2:12,12,26:64:255,125,255,0,102,88
+chr21	8699297	chr21:8699297:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20:44:238,0,255	0/1:29,20:49:203,0,255	0/1:35,16:55:146,0,255
+chr21	8699702	chr21:8699702:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,13:29:70,146,255,0,123,82	0/2:6,2,4:14:15,21,92,0,20,51	0/1:34,13,4:51:2,0,255,94,231,255
+chr21	8700053	chr21:8700053:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,38:68:255,0,255	0/1:18,16:47:255,0,255	0/1:44,43:107:255,0,255
+chr21	8702753	chr21:8702753:M	TATATACATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:47,19:66:170,0,255	0/1:56,12:68:17,0,255	0/1:72,21:93:117,0,255
+chr21	8703149	chr21:8703149:M	TGTGTGTGTGTGTGTGTGTG	<8>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,62:79:255,0,110	0/1:23,49:78:255,0,255	0/1:40,55:100:255,0,255
+chr21	8703177	chr21:8703177:M	TATGTATGTGTGTGTGTGTGTATATATATATGTAT	<1.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:44,20:64:255,0,255	0/1:47,12:63:209,0,255	0/1:71,14:89:192,0,255
+chr21	8758717	chr21:8758717:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:44,11:56:97,0,255	0/1:27,14:50:204,0,255	0/1:38,9:51:86,0,255
+chr21	8777201	chr21:8777201:M	TTTTATTTTTAATTTTTTTTTTCTTTT	<4.3>	.	.	Motif=TTTTAT	GT:AD:DP:PL	1/1:6,47:53:255,63,0	1/1:0,34:34:255,98,0	1/1:11,54:65:255,23,0
+chr21	8782166	chr21:8782166:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	1/1:11,38:51:255,15,0	1/1:3,22:25:182,35,0	1/1:6,53:67:255,99,0
+chr21	8782187	chr21:8782187:M	TCTCTCTCTCTCTCT	<9.5>,<10.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,4,3:7:130,30,10,38,0,19	1/2:0,3,3:7:128,38,18,29,0,10	0/1:2,6,3:11:122,0,4,25,3,46
+chr21	8782201	chr21:8782201:M	TATATATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:21,18:39:79,0,108	0/1:6,9:15:50,0,20	0/1:26,28:58:168,0,106
+chr21	8784747	chr21:8784747:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,18:73:145,0,159	0/1:2,12:31:126,0,1	0/1:11,18:65:170,0,100
+chr21	8786414	chr21:8786414:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,26:74:239,0,255	0/1:26,25:51:255,0,255	0/1:50,24:74:196,0,255
+chr21	8788021	chr21:8788021:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT	<20>,<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,17,10:41:49,0,88,64,8,213	1/2:3,5,7:19:48,32,71,31,0,69	0/1:10,21,7:43:105,0,37,145,17,255
+chr21	8788743	chr21:8788743:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,15:51:99,0,138	0/1:11,13:35:128,0,28	0/1:38,11:60:45,0,231
+chr21	8806868	chr21:8806868:M	GTGTGTGTGTGCGCGCGTGTGTGTGTGTGTGTGTGTTTGTGTGTGCGGTGTGTGTTTGTGTGTGTG	<22.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,3:12:35,0,186	0/0:13,1:14:0,16,255	0/0:9,1:10:0,7,200
+chr21	8812136	chr21:8812136:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,70:96:255,0,37	0/1:15,38:55:255,0,33	0/1:34,81:116:255,0,103
+chr21	8812543	chr21:8812543:M	TTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,7:28:156,0,255	0/1:13,2:20:34,0,255	0/1:32,4:55:54,0,255
+chr21	8813848	chr21:8813848:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:7:105,0,6	1/1:0,0:1:9,2,0	0/1:0,1:4:23,0,7
+chr21	8814065	chr21:8814065:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,7:43:29,0,95	0/1:7,8:26:39,0,35	0/1:26,14:51:27,0,125
+chr21	8814500	chr21:8814500:M	TTTCTTTTTTTTCTTTT	<3.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/0:25,7:32:0,15,171	0/1:14,6:20:6,0,82	0/0:38,9:47:0,34,255
+chr21	8815123	chr21:8815123:M	TTTTTTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,1:12:56,22,183,0,160,157	1/2:0,3,3:6:158,31,13,31,0,13	0/1:8,4,1:13:92,0,186,29,189,215
+chr21	8816400	chr21:8816400:M	AGGGTTAGGGTTAGGGGTTAGGGTTAGGGTCAGGGGTTAGTGGTCAGGTTCAGGGGTTAGGGATCAGGGTCAGGGGTTAGGGATCAGGGTCAGGTTCAGGG	<12.5>	.	.	Motif=AGGGTC	GT:AD:DP:PL	1/1:0,4:4:106,12,0	0/0:0,0:2:0,0,0	1/1:0,2:2:53,6,0
+chr21	8817239	chr21:8817239:M	TTCTTTTCTTTCTTGTTTTTTTTTTTTTTTC	<5.8>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:13,20:36:168,0,54	0/1:9,25:35:209,0,10	1/1:9,24:40:241,0,0
+chr21	8824095	chr21:8824095:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,3:19:0,13,175	0/1:10,5:15:24,0,91	0/0:29,5:34:0,29,255
+chr21	8828774	chr21:8828774:M	AAAAAAAAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,8:12:189,0,27	0/1:2,11:15:255,0,31	0/1:2,20:26:255,0,6
+chr21	8829420	chr21:8829420:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6:28:7,0,147	0/1:14,12:31:55,0,121	0/1:33,12:50:4,0,255
+chr21	8831799	chr21:8831799:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,14:23:134,0,44	0/1:5,18:26:176,0,15	0/1:18,11:31:60,0,177
+chr21	8836653	chr21:8836653:M	AAAAAAAAAAAAAAAAAAAAGAAAA	<21>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,6,1:29:138,0,255,178,122,255	0/2:6,1,4:15:1,11,224,0,42,39	0/1:9,9,1:25:231,0,183,253,69,255
+chr21	8847278	chr21:8847278:M	TTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,9:28:146,0,255	0/1:18,5:36:89,0,255	0/1:21,2:43:3,0,255
+chr21	8877314	chr21:8877314:M	TTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,6,1:22:87,0,118,94,72,228	0/2:2,0,5:9:88,100,158,0,26,15	0/2:7,0,4:15:39,75,236,0,120,130
+chr21	8988039	chr21:8988039:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:20,12:36:215,0,255	0/1:99,22:123:152,0,255	0/1:34,16:54:224,0,255
+chr21	8990385	chr21:8990385:M	GTCTGTCTGTCTGTCT	<4.5>,<5.5>	.	.	Motif=GTCT	GT:AD:DP:PL	1/2:16,53,26:95:255,45,7,251,0,255	1/2:0,53,29:96:255,255,29,255,0,255	0/2:30,29,32:91:255,49,224,0,149,255
+chr21	8990441	chr21:8990441:M	CACACCACACACACACACACACAGACACTCTCACACTCACACACAC	<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:17,71:136:255,72,0	1/1:0,88:107:255,255,0	0/1:27,40:112:255,0,162
+chr21	8993629	chr21:8993629:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:16,81,83:180:255,255,255,255,0,255	1/2:1,107,79:188:255,255,255,255,0,255	1/2:39,80,73:194:255,255,197,213,0,255
+chr21	8995570	chr21:8995570:M	ATATATATATATATATATATATATATATATATATATATATATAT	<4>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,57:91:255,175,0	1/1:0,80:96:255,227,0	1/1:0,79:101:255,170,0
+chr21	8995801	chr21:8995801:M	ATGGATATGGAT	<2.2>	.	.	Motif=ATGGAT	GT:AD:DP:PL	0/0:38,8:46:0,38,255	0/0:24,8:33:0,3,177	0/1:46,23:70:56,0,255
+chr21	8996039	chr21:8996039:M	AAAAAAAAAAAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:81,9,0	1/1:0,2:4:78,9,0	0/1:0,8:16:218,0,22
+chr21	8996071	chr21:8996071:M	GAAGGAAGGAAGGAAGGAAGGA	<6.5>,<9.5>,<10.5>	.	.	Motif=GAAG	GT:AD:DP:PL	1/3:0,3,0,8:14:208,179,166,96,62,106,37,0,69,66	2/3:0,0,9,5:18:255,255,255,37,20,0,74,52,0,51	1/3:0,14,0,18:36:255,255,255,250,133,255,123,0,255,255
+chr21	8997980	chr21:8997980:M	TATATATATATTCATATATACATATGCATATATATGTATAATATACATATATACATGCATACACATATATAATATACATATATATA	<30.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,8:40:167,0,192	0/1:2,8:22:186,0,24	0/1:11,4:35:64,0,251
+chr21	9002075	chr21:9002075:M	GTGGGGTGGGG	<1.8>	.	.	Motif=GTGGG	GT:AD:DP:PL	0/1:93,57:150:255,0,255	0/1:94,39:133:255,0,255	0/1:161,31:192:18,0,255
+chr21	9021106	chr21:9021106:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTGTGTGTTTGTGTGTGTGTG	<24>,<26>,<30>,<32>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,6,0,5,3:18:255,198,177,255,162,229,177,0,85,145,239,61,124,130,215	1/2:0,11,5,1,0:18:255,80,30,176,0,128,255,53,150,255,255,68,165,255,255	2/4:0,2,5,1,14:28:255,255,255,255,255,255,255,255,193,255,220,107,0,162,174
+chr21	9022114	chr21:9022114:M	TATATATATACACTTTATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,11:45:90,0,51	0/0:9,3:14:0,3,49	0/1:16,26:59:179,0,26
+chr21	9022146	chr21:9022146:M	TCTCTCTCTCTCTCTCTCTATCTCTCTCT	<13.5>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:5,15,9:40:170,32,4,158,0,255	1/2:1,1,7:12:64,54,56,8,0,85	1/1:4,26,9:65:255,52,0,255,63,255
+chr21	9025188	chr21:9025188:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,8:59:0,49,255	0/0:46,9:68:0,68,255	0/1:26,21:61:76,0,216
+chr21	9027842	chr21:9027842:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:37:255,58,0	1/1:0,23:38:255,83,0	1/1:0,41:55:255,127,0
+chr21	9028014	chr21:9028014:M	TTGTTTTTTTTTGTTTGTTTGTTT	<5.8>,<7.2>	.	.	Motif=TTGT	GT:AD:DP:PL	1/2:0,12,3:19:107,62,47,76,0,230	2/2:0,0,6:8:133,145,166,23,24,0	1/2:4,21,8:35:176,109,109,108,0,255
+chr21	9038074	chr21:9038074:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:206,22,0	1/1:0,1:1:17,3,0	1/1:1,15:19:255,37,0
+chr21	9038270	chr21:9038270:M	TTTTTTTTTTTTTT	<10>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:7,34,20:73:255,29,255,255,0,255	0/1:7,37,16:72:255,0,255,255,3,255	0/1:30,32,9:97:255,0,255,255,255,255
+chr21	9038689	chr21:9038689:M	TTTTTTTTTTTTT	<10>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3,5:21:26,0,255,15,51,87	1/2:1,5,4:12:124,31,107,96,0,100	0/1:29,8,2:40:91,0,255,158,255,255
+chr21	9038885	chr21:9038885:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:164,27,0	0/1:1,0:2:5,0,12	1/1:1,15:16:249,29,0
+chr21	9039487	chr21:9039487:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,18:41:255,0,255	1/1:0,31:45:255,92,0	0/1:27,32:68:255,0,255
+chr21	9040283	chr21:9040283:M	TTTTTTTTTTTTTCTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,16:44:255,126,47,255,0,151	1/1:0,17,0:25:255,66,0,255,59,219	1/2:0,38,26:67:255,202,84,255,0,218
+chr21	9041099	chr21:9041099:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:28:71,0,230	1/1:0,7:11:125,11,0	0/1:21,19:43:228,0,255
+chr21	9041504	chr21:9041504:M	ATATATATATATATATATATATAT	<7.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:9,1,4:20:57,37,255,0,161,138	0/2:6,1,3:12:49,24,172,0,109,96	0/1:13,9,1:29:158,0,255,92,226,255
+chr21	9041527	chr21:9041527:M	TTTTTTTTTTTTTTTT	<11>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,8,2:14:168,0,62,140,38,210	1/2:0,4,3:9:165,80,71,89,0,74	1/1:0,23,0:24:255,56,0,255,69,255
+chr21	9042403	chr21:9042403:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,49:82:255,0,129	0/1:56,31:98:99,0,255	0/1:55,44:109:210,0,255
+chr21	9042798	chr21:9042798:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,20:36:187,0,64	0/1:15,17:32:123,0,98	0/1:10,29:41:253,0,34
+chr21	9044096	chr21:9044096:M	AGGGTTAGGGTTAGGGGTTAGGGTTAGGGTCAGGGGTTAGGGGTCAGGGGTTAGGGGTCAGGGTCAGGGGTCAGGGTCAGGTTCAGGG	<5.8>	.	.	Motif=AGGGTC	GT:AD:DP:PL	1/1:0,21:22:255,65,0	1/1:0,18:19:255,54,0	1/1:1,22:23:255,47,0
+chr21	9045179	chr21:9045179:M	TTGTTGTTGTTGTTGTT	<6.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:46,21:67:53,0,255	0/1:23,14:38:51,0,160	0/0:46,10:59:0,41,255
+chr21	9053749	chr21:9053749:M	ACACACACACACACACACACACACATACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:21,4:27:0,7,248	0/1:6,7:14:70,0,45	0/1:31,8:49:66,0,255
+chr21	9057942	chr21:9057942:M	AAAAAAAGAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,2:11:0,8,72	0/0:17,2:19:0,29,152	0/1:25,10:35:11,0,165
+chr21	9072878	chr21:9072878:M	GGAGGAGGAGAGGAG	<4>	.	.	Motif=GGA	GT:AD:DP:PL	0/1:24,10:34:80,0,255	0/1:4,7:11:87,0,36	0/1:36,14:50:100,0,255
+chr21	9078248	chr21:9078248:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:13,21,18:52:255,22,233,102,0,125	1/2:0,15,20:35:255,198,153,187,0,91	0/1:24,56,5:86:255,0,255,255,235,255
+chr21	9084568	chr21:9084568:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTG	<20.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:21,1,0:29:64,0,255,128,246,255	1/2:1,3,3:8:85,24,72,67,0,84	0/1:11,3,1:17:53,0,218,80,116,190
+chr21	9088788	chr21:9088788:M	TATGTATGTATGTAT	<1.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:8,0:8:0,24,222	.	0/1:2,4:6:91,0,37
+chr21	9088851	chr21:9088851:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:33:168,0,183	0/1:4,13:17:156,0,14	0/1:12,21:33:244,0,98
+chr21	9105777	chr21:9105777:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,62,0	.	1/1:1,15:16:246,29,0
+chr21	9106908	chr21:9106908:M	ACACACACACACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,11:48:160,0,255	0/1:10,15:39:212,0,207	0/1:23,7:43:93,0,255
+chr21	9107926	chr21:9107926:M	TATATATATAT	<3.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:26,1:27:0,59,255	0/1:6,3:9:38,0,102	0/0:44,2:47:0,96,255
+chr21	9110203	chr21:9110203:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:22:0,15,104	1/1:0,4:13:55,15,0	0/0:14,2:29:0,41,203
+chr21	9115662	chr21:9115662:M	AAAAAAAAAAAGAAAAGAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,18:36:227,0,216	1/1:0,18:18:255,53,0	0/1:20,26:47:255,0,238
+chr21	9117865	chr21:9117865:M	AAAAAAAAAAAAATAAAAATAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,12:37:214,0,255	0/1:7,19:27:255,0,122	0/1:41,19:61:255,0,255
+chr21	9121382	chr21:9121382:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:14:13,0,255	1/1:0,5:5:136,15,0	0/1:12,4:17:57,0,255
+chr21	9121528	chr21:9121528:M	AAAAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5,11:31:54,0,255,0,15,59	0/2:3,2,6:17:32,20,203,0,11,23	0/1:18,19,7:47:255,0,255,255,107,255
+chr21	9121942	chr21:9121942:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,18:51:82,0,255	0/1:5,19:27:156,0,18	0/1:36,27:68:155,0,255
+chr21	9124831	chr21:9124831:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:21:65,0,54	1/1:2,7:9:54,2,0	0/0:16,5:21:0,1,121
+chr21	9133336	chr21:9133336:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:5,0,100	0/0:6,0:6:0,16,72	0/0:5,0:8:0,18,77
+chr21	9134281	chr21:9134281:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,25:38:255,0,106	0/1:8,18:26:222,0,56	0/1:31,18:49:162,0,255
+chr21	9134732	chr21:9134732:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:53,20:76:34,0,255	0/1:44,18:65:38,0,255	0/1:72,30:103:77,0,255
+chr21	9134891	chr21:9134891:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,3:25:3,0,255	0/1:4,5:9:102,0,77	0/1:19,9:28:149,0,255
+chr21	9144154	chr21:9144154:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,7,17:42:73,88,255,0,45,142	1/2:1,4,7:12:73,62,108,31,0,48	0/2:18,6,11:35:25,53,255,0,87,159
+chr21	9148728	chr21:9148728:M	AAAAAGAAAAAGGAAAAAAAAAG	<3.7>	.	.	Motif=AAAAAG	GT:AD:DP:PL	0/1:11,20:31:187,0,64	0/1:7,3:10:13,0,68	0/1:11,13:24:111,0,83
+chr21	9149056	chr21:9149056:M	TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTATGTGTGTG	<19>	.	.	Motif=TG	GT:AD:DP:PL	0/0:37,0:39:0,84,255	1/1:1,9:13:105,20,0	0/0:25,4:31:0,26,231
+chr21	9151857	chr21:9151857:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,14:16:135,21,0	1/1:0,0:1:10,3,0	0/1:4,6:12:52,0,13
+chr21	9166200	chr21:9166200:M	TTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,7:15:151,0,159	1/1:0,6:8:153,7,0	0/1:12,4:21:49,0,255
+chr21	9181896	chr21:9181896:M	GTGTGTGTGTATGTGTGTTTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<27>	.	.	Motif=GT	GT:AD:DP:PL	0/1:30,26:61:76,0,141	0/0:19,8:34:0,14,146	0/1:29,16:51:25,0,151
+chr21	9192914	chr21:9192914:M	AAAAAAAAGGAAAAAAGAAAAAGAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,6:19:112,0,255	0/1:6,4:10:83,0,118	0/1:35,5:41:17,0,255
+chr21	9193067	chr21:9193067:M	TCTCTCTCTCTCTCTCT	<7.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:41,2:44:0,86,255	0/1:16,8:27:34,0,134	0/0:73,3:79:0,165,255
+chr21	9246106	chr21:9246106:M	GAATGGAATGGAATGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	1/1:43,549:592:255,255,0	1/1:65,608:673:255,118,0	0/1:68,558:626:255,0,83
+chr21	9246379	chr21:9246379:M	GGAATGGAATGGAAT	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:165,576:759:255,0,255	0/1:176,629:822:255,0,255	0/1:141,588:755:255,0,255
+chr21	9246463	chr21:9246463:M	GAATGGAATTGAATAGAGTGGAATGAAATGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	0/1:135,587:725:255,0,255	0/1:135,645:789:255,0,255	0/1:118,601:727:255,0,255
+chr21	9247746	chr21:9247746:M	AGTGGAGTGGGATGGAGTG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	0/1:252,125:377:255,0,255	0/1:260,148:408:255,0,255	0/1:250,150:400:255,0,255
+chr21	9247991	chr21:9247991:M	GGAATGGAATTGAATGGAGGGGAATGGAATGGGATGGA	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:256,367:639:255,0,255	0/1:213,377:612:255,0,255	0/1:213,374:600:255,0,255
+chr21	9248680	chr21:9248680:M	GGAATGGAACGGATTAGAGTGGAATGGAATGGA	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:89,266:356:255,0,255	0/1:109,277:386:255,0,255	0/1:96,259:355:255,0,255
+chr21	9254015	chr21:9254015:M	TTTGTGTGTGTGTTTGTTTTTTTTTGT	<7.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:1,37:41:255,95,0	0/0:15,0:16:0,44,255	1/1:0,25:32:255,75,0
+chr21	9254039	chr21:9254039:M	TGTGTGTGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,3:9:8,0,142	0/0:24,0:24:0,72,255	0/0:10,2:13:0,14,255
+chr21	9281359	chr21:9281359:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,15:27:255,0,75	0/1:10,7:25:110,0,161	0/1:13,14:45:255,0,180
+chr21	9293315	chr21:9293315:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAA	<8.5>,<11.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,12,5:17:255,63,84,255,0,255	0/1:8,3,1:12:33,0,164,50,85,132	0/1:10,4,0:15:51,0,192,85,123,192
+chr21	9305750	chr21:9305750:M	CACACACACACACACACACACACACACACACACACACAC	<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,21:69:103,0,6	0/1:27,9:74:21,0,98	0/1:12,17:98:38,0,111
+chr21	9306079	chr21:9306079:M	TATATATATATATATATATATATTTATATTTATATTTATATATTTATATTTATATTT	<9.2>,<10.2>	.	.	Motif=TATATT	GT:AD:DP:PL	1/2:1,7,4:15:68,38,34,48,0,106	0/2:0,0,1:2:8,11,17,0,4,2	1/1:3,15,0:19:78,19,0,127,53,255
+chr21	9317326	chr21:9317326:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:51,17:68:77,0,255	0/1:53,17:73:58,0,255	0/0:83,7:90:0,150,255
+chr21	9321493	chr21:9321493:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:11:154,15,0	0/1:22,6:28:17,0,255	1/1:1,20:22:255,38,0
+chr21	9324658	chr21:9324658:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<34>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:80,18,9,57,0,50	1/2:1,2,3:7:84,33,46,31,0,37	1/1:0,6,0:6:143,18,0,132,18,124
+chr21	9332490	chr21:9332490:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:67,10:78:0,87,255	0/1:63,22:86:45,0,255	0/0:111,1:122:0,255,255
+chr21	9333366	chr21:9333366:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:58,61:124:255,0,253	0/1:101,39:145:16,0,255	0/1:49,53:110:255,0,193
+chr21	9345622	chr21:9345622:M	TTTTCATTTTTTTTCCTTTTCTTTTCTTTTCTTTTTTTTTACTTT	<8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:67,37:105:255,0,255	0/1:73,65:141:255,0,255	0/1:104,44:150:255,0,255
+chr21	9352683	chr21:9352683:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:15:130,0,110	0/1:3,7:16:160,0,75	0/0:3,0:4:0,2,72
+chr21	9354167	chr21:9354167:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,15:38:255,0,122	0/1:20,14:43:255,0,255	0/1:15,14:38:255,0,255
+chr21	9355327	chr21:9355327:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:44,87:143:255,0,146	0/1:61,96:165:255,0,255	0/1:108,26:148:47,0,255
+chr21	9356028	chr21:9356028:M	TCTCTCTCTCTCTCTCTCTCT	<12.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:15,1:19:0,31,255	0/0:31,0:47:0,121,255	0/1:27,16:53:146,0,255
+chr21	9357476	chr21:9357476:M	AAAAAAAAAGAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:182,53:250:0,22,255	0/0:182,29:239:0,103,255	0/1:147,61:228:147,0,255
+chr21	9357529	chr21:9357529:M	TTTTTTGTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:100,87:232:255,0,255	0/1:133,54:224:106,0,255	0/1:85,56:187:201,0,255
+chr21	9373555	chr21:9373555:M	AAAAAAAAGAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,11:40:176,0,255	0/0:72,0:73:0,216,255	0/1:13,26:42:255,0,229
+chr21	9376219	chr21:9376219:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16.5>,<17.5>,<18.5>	.	.	Motif=TC	GT:AD:DP:PL	0/3:3,1,2,10:20:255,183,167,81,96,89,0,17,35,43	2/3:1,0,5,4:13:116,72,65,10,21,7,15,20,0,23	1/3:6,8,0,2:20:64,13,21,22,27,95,4,0,104,176
+chr21	9376249	chr21:9376249:M	TATATATATATATATATATATATATATA	<12.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,8,10:27:242,134,128,98,0,44	1/2:0,4,2:10:98,23,7,63,0,47	2/2:0,0,13:39:255,255,255,77,95,0
+chr21	9527280	chr21:9527280:M	TTTTTTTTTTTTTT	<12>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9,6:25:120,0,235,114,42,219	0/1:15,5,1:22:58,0,255,100,149,245	1/2:10,9,16:35:159,69,255,70,0,151
+chr21	9527753	chr21:9527753:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,21:26:255,13,0	0/1:10,27:39:255,0,48	0/1:8,15:24:159,0,63
+chr21	9536364	chr21:9536364:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:42,9:54:47,0,255	0/0:61,0:63:0,182,255	0/1:30,23:57:255,0,255
+chr21	9538526	chr21:9538526:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,2:30:0,55,255	0/1:13,9:22:77,0,140	0/0:19,3:23:0,19,255
+chr21	9538915	chr21:9538915:M	TTTTTTATTTCTTTCTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTT	<54>,<56>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,0,5:14:29,70,255,0,125,84	1/2:1,3,5:9:109,52,111,54,0,46	2/2:4,0,13:20:154,177,255,1,50,0
+chr21	9541066	chr21:9541066:M	TGTGTGTGTGTGAGTGTGCGTATGTGTGTGCGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,6:23:12,0,152	0/0:23,0:23:0,64,255	0/1:14,8:22:39,0,115
+chr21	9541916	chr21:9541916:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,5:29:0,24,196	0/0:22,2:25:0,45,213	0/1:12,13:28:89,0,50
+chr21	9544220	chr21:9544220:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,3,17:38:255,151,213,0,123,206	0/1:11,12,7:32:100,0,44,26,57,209	0/2:31,11,13:56:116,30,201,0,216,255
+chr21	9544541	chr21:9544541:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5:19:19,0,105	0/1:8,7:16:40,0,63	0/1:18,8:27:23,0,155
+chr21	9545072	chr21:9545072:M	GGGGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/1:25,11:43:5,0,174	0/0:12,0:20:0,49,173	0/1:21,22:51:100,0,109
+chr21	9546124	chr21:9546124:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,2,0:10:28,0,97,26,62,69	0/2:11,1,7:20:36,38,216,0,91,59	0/1:6,13,2:23:222,0,56,124,38,128
+chr21	9546599	chr21:9546599:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,4:18:9,0,163	0/0:9,0:11:0,31,154	0/1:17,6:23:24,0,191
+chr21	9547958	chr21:9547958:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:20:30,0,133	0/0:12,1:15:0,28,174	0/1:11,7:19:57,0,101
+chr21	9553153	chr21:9553153:M	TTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,13:20:255,0,77	0/1:0,7:11:163,0,5	0/1:5,4:12:80,0,121
+chr21	9554815	chr21:9554815:M	TTTTTTTTTTTGTTTTTTGTTTTTTTTT	<30>,<31>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,15:30:255,231,146,206,0,120	1/1:0,5,0:5:130,15,0,85,14,71	2/2:0,0,6:6:169,104,87,18,17,0
+chr21	9555114	chr21:9555114:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,20:28:182,0,1	0/1:9,9:18:60,0,60	0/1:4,2:8:24,0,28
+chr21	9568146	chr21:9568146:M	GATGATGATGATG	<5.3>	.	.	Motif=GAT	GT:AD:DP:PL	0/1:19,6:25:3,0,156	0/1:12,7:19:30,0,87	0/0:50,8:58:0,63,255
+chr21	9568474	chr21:9568474:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,13:55:0,9,255	0/0:50,11:61:0,47,255	0/1:32,23:56:91,0,193
+chr21	9576101	chr21:9576101:M	TTTATTTTATTT	<2.2>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/1:38,29:72:128,0,212	0/0:48,14:72:0,8,255	0/1:64,42:106:155,0,255
+chr21	9579077	chr21:9579077:M	TATATATATATATCATAT	<8>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:2,5,4:13:55,12,8,47,0,202	0/1:3,3,2:9:20,0,10,23,14,148	0/0:27,2,1:31:0,48,226,81,255,255
+chr21	9590868	chr21:9590868:M	CTTTTCCTTTTCTTTTTCTTTTTTTTTTTTTTTT	<6.4>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:6,0:6:0,16,61	0/0:2,0:5:0,6,22	1/1:0,6:6:61,16,0
+chr21	9592383	chr21:9592383:M	ACACACACACACACACACACTCACACAGAGACACACACACA	<17.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,9:20:78,122,255,0,134,78	0/0:13,0,3:16:0,47,255,6,177,131	1/2:0,7,21:28:255,255,255,166,0,93
+chr21	9592922	chr21:9592922:M	TTTTTTTTTTATTTTTTATTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:3:0,3,12	1/1:0,1:2:30,3,0	1/1:1,14:15:255,14,0
+chr21	9593108	chr21:9593108:M	TTTTATTTTACTTTTTTTTTTTATT	<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,11:11:97,27,0	1/1:2,16:18:123,27,0	0/0:18,5:23:0,13,114
+chr21	9604526	chr21:9604526:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:1,0,68	0/1:2,3:6:18,0,11	0/0:18,0:18:0,48,200
+chr21	9607114	chr21:9607114:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,1:10:0,16,93	0/1:7,3:11:5,0,60	0/0:25,6:31:0,15,219
+chr21	9610522	chr21:9610522:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:12:0,31,114	0/1:8,6:15:18,0,46	0/0:11,2:16:0,19,103
+chr21	9619746	chr21:9619746:M	TTATTATAATTATTAT	<4.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:30,9:39:57,0,255	0/1:24,11:35:95,0,255	0/0:36,0:36:0,106,255
+chr21	9626221	chr21:9626221:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:48,22:73:141,0,255	1/1:1,12:13:169,22,0	0/0:29,5:35:0,23,255
+chr21	9629089	chr21:9629089:M	ATATACATATATATATAGTATATAT	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:57,0:57:0,164,255	0/1:10,5:15:32,0,106	0/0:49,0:49:0,141,255
+chr21	9657308	chr21:9657308:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,5,0,1:9:102,34,60,78,58,86,85,0,46,123	1/3:0,6,0,6:15:186,116,178,166,171,200,101,0,54,134	2/3:0,1,3,0:6:54,41,42,30,24,23,37,18,0,83
+chr21	9662361	chr21:9662361:M	TTTTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:17,0,12:30:37,121,255,0,181,94	0/0:13,0,1:16:0,29,255,13,135,94	1/2:7,19,7:37:255,3,141,255,0,255
+chr21	9666845	chr21:9666845:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,0,21:36:255,255,255,0,214,113	1/2:1,21,10:36:255,151,200,255,0,255	0/2:21,0,16:50:143,255,255,0,255,255
+chr21	9680860	chr21:9680860:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:15,0:15:0,42,197	0/1:12,18:30:147,0,70	0/0:20,0:23:0,58,255
+chr21	9694961	chr21:9694961:M	ATATATATGTCTATATATATATATACATAT	<14>	.	.	Motif=AT	GT:AD:DP:PL	0/1:11,35:46:255,0,74	0/1:40,16:56:123,0,255	0/1:16,40:56:255,0,133
+chr21	9709049	chr21:9709049:M	GTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:0,0:1:0,0,0	1/1:1,16:17:208,34,0	1/1:0,4:5:70,14,0
+chr21	9709123	chr21:9709123:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:17,6:23:90,0,255	0/0:14,0:14:0,42,255	0/1:10,6:17:111,0,219
+chr21	9709864	chr21:9709864:M	AATAATAATAATAATAAT	<7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:31,0:31:0,88,255	0/0:4,0:5:0,1,42	0/1:11,5:17:22,0,120
+chr21	9709882	chr21:9709882:M	TATATATATATATATATATA	<4.5>,<9>,<11>	.	.	Motif=TA	GT:AD:DP:PL	0/3:10,0,0,15:26:82,159,255,139,255,255,0,114,70,39	2/3:0,0,6,4:11:75,106,255,43,88,60,54,113,0,82	0/1:6,11,0,0:19:255,0,123,255,50,255,255,64,255,255
+chr21	9709901	chr21:9709901:M	AGAGAGAGAGAGAGAGAGA	<11.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,10:34:162,0,242	0/0:15,0:16:0,44,255	0/1:12,5:24:68,0,203
+chr21	9712972	chr21:9712972:M	ACACACACACACACACACACACACACACAC	<13>,<14>,<16>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,3,0,11:16:151,114,255,154,234,242,64,0,41,57	0/2:20,0,9,5:34:10,84,255,0,255,186,45,255,119,255	1/3:2,9,0,14:25:255,136,255,231,255,255,164,0,96,183
+chr21	9722805	chr21:9722805:M	AACAACAACAACAACAACAACAA	<5.7>,<9.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/2:0,20,40:66:255,255,255,255,0,255	0/2:40,11,15:74:202,198,255,0,255,255	0/2:37,0,22:62:255,255,255,0,255,255
+chr21	9724209	chr21:9724209:M	ACACACACACACACACACACACACACACACACACACAC	<16>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,16,15:52:255,12,239,124,0,121	0/1:12,21,10:61:255,0,217,255,15,246	0/1:11,13,0:54:163,0,255,170,235,255
+chr21	9727768	chr21:9727768:M	AAAAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,25:35:255,255,255,76,95,0	0/2:9,13,8:46:111,95,209,0,13,255	0/2:14,1,11:41:205,255,255,0,161,255
+chr21	9742111	chr21:9742111:M	AAGTGAAGTGA	<2.4>	.	.	Motif=AAGTG	GT:AD:DP:PL	1/1:17,72:89:255,79,0	0/0:79,29:108:0,38,255	0/0:75,31:106:0,19,255
+chr21	9746229	chr21:9746229:M	TTTTTTTTTTTTTTTTTT	<16>,<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:7,7,25,8:48:171,103,255,6,65,16,218,152,0,255	2/3:5,2,11,8:27:79,76,245,27,110,70,76,76,0,164	1/2:5,14,28,1:50:255,123,172,69,0,7,255,215,104,255
+chr21	9746593	chr21:9746593:M	GTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,59:76:255,0,225	0/1:27,81:109:255,0,255	0/1:23,75:101:255,0,255
+chr21	9755719	chr21:9755719:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:52,30:84:204,0,255	0/1:23,41:65:255,0,138	0/1:24,40:82:255,0,255
+chr21	9761944	chr21:9761944:M	TGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,12,8:38:255,0,255,92,255,255	0/2:10,6,15:34:255,118,255,0,163,206	0/1:16,19,7:58:255,0,255,213,255,255
+chr21	9764569	chr21:9764569:M	CACACACACACACACACACACACACCACACACACA	<19.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:14,13,14:52:255,196,255,0,47,255	0/2:13,14,16:59:255,156,240,0,20,255	1/2:14,28,9:62:255,24,96,156,0,255
+chr21	9765079	chr21:9765079:M	TATATATATATATATATATATATATATATATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,34:58:255,0,141	1/1:0,20:23:255,58,0	0/1:0,18:31:255,0,2
+chr21	9775731	chr21:9775731:M	TTTCTTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<10.2>,<15.5>,<16.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,7,7,2:31:255,226,255,178,0,148,215,60,141,211	1/3:0,20,5,6:50:255,255,255,255,21,255,255,0,255,255	2/3:0,0,11,9:36:255,255,255,111,138,32,128,191,0,92
+chr21	9775782	chr21:9775782:M	TTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,6:55:8,0,255	0/1:38,9:49:111,0,255	0/1:47,29:78:255,0,255
+chr21	9785414	chr21:9785414:M	TTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3,0:6:57,50,120,0,71,59,49,70,26,61	2/3:2,0,2,3:9:55,64,172,12,87,64,18,35,0,14	1/3:1,4,2,3:16:164,39,124,75,45,106,117,0,59,109
+chr21	9791326	chr21:9791326:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,83:107:255,0,77	1/1:16,91:107:255,55,0	0/1:38,51:90:255,0,255
+chr21	9794599	chr21:9794599:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:12,27,14:54:255,1,97,144,0,119	1/2:9,19,30:58:255,126,202,89,0,26	1/1:7,40,0:49:255,20,0,255,61,255
+chr21	9794759	chr21:9794759:M	AAAAAAAAAATAAAAAAAAAAAAAA	<14>,<16>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,2,2,10:36:255,89,220,218,227,255,252,0,129,222	1/3:0,13,3,4:30:255,37,48,208,49,229,255,0,171,255	0/2:4,0,6,1:20:137,60,185,0,119,126,130,73,14,145
+chr21	9794783	chr21:9794783:M	ATATATATATATATATATATACATATATA	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,4:23:60,0,183	0/1:4,5:9:92,0,72	0/1:6,6:21:112,0,124
+chr21	9820677	chr21:9820677:M	ACACACACACAGACACACACACACACACACACACACACAC	<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	0/2:39,88,81:268:255,107,61,0,14,255	0/1:44,89,39:234:255,0,75,153,240,255	0/2:24,35,41:185:255,105,255,0,255,255
+chr21	9823502	chr21:9823502:M	AGACACACACACAGACACA	<2.8>	.	.	Motif=AGACAC	GT:AD:DP:PL	0/1:127,61:188:232,0,255	0/0:188,54:242:0,3,255	0/1:100,46:148:163,0,255
+chr21	9827726	chr21:9827726:M	ACACACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,22:43:92,0,24	0/0:23,10:42:0,20,152	1/1:6,17:33:125,17,0
+chr21	9833357	chr21:9833357:M	ACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,13:17:193,0,9	0/1:13,15:31:203,0,178	0/1:2,10:13:151,0,2
+chr21	9837570	chr21:9837570:M	ACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,2:15:50,0,246	0/1:9,6:15:142,0,193	0/1:12,7:19:149,0,255
+chr21	9838981	chr21:9838981:M	ACACAGACACACTCACACACACACACACACACACACACA	<18.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:20,8,12:40:99,121,255,0,104,255	0/2:31,1,7:43:8,87,255,0,252,255	1/2:16,16,12:49:105,51,173,21,0,255
+chr21	9851709	chr21:9851709:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,20:27:255,0,6	0/1:8,6:16:71,0,111	0/1:9,5:17:78,0,124
+chr21	9854366	chr21:9854366:M	TTTGTTTGTTTTTTTG	<5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:35,79:116:255,0,91	1/1:20,84:104:255,61,0	0/1:56,62:119:255,0,255
+chr21	9855936	chr21:9855936:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:53,36:90:223,0,255	0/1:65,19:84:11,0,255	0/1:36,54:90:255,0,219
+chr21	9858104	chr21:9858104:M	ATATATATATATATATATATATATATATATATATATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,31:37:255,109,0	1/1:0,21:22:255,66,0
+chr21	9873956	chr21:9873956:M	AAACAAACAAACAAACAAACAAACAAACAAAC	<7>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:14,91:106:255,119,0	1/1:17,95:112:255,102,0	1/1:20,105:126:255,101,0
+chr21	9874574	chr21:9874574:M	CACACACACACACACACACACACACACACACACACACACACACACACACACA	<19>,<21>,<23>,<24>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,8,7,4:19:255,255,255,128,161,110,116,96,0,63,198,138,19,78,151	3/4:0,0,0,8,9:19:255,255,255,236,255,255,73,64,59,23,81,64,50,0,29	0/1:3,7,4,0,0:18:214,0,83,43,55,125,177,79,133,243,208,56,101,231,247
+chr21	9878731	chr21:9878731:M	TTTTTTTCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,20,24:53:255,214,108,178,0,71	2/2:0,0,24:33:255,255,231,74,65,0	1/2:0,21,38:61:255,255,193,226,0,48
+chr21	9878921	chr21:9878921:M	TTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:16,30,7:64:255,93,187,161,0,255	1/2:0,32,28:65:255,255,255,255,0,255	0/1:40,36,2:78:179,0,237,255,255,255
+chr21	9884757	chr21:9884757:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,17:45:70,0,48	0/1:0,11:19:49,0,2	1/1:5,27:46:198,39,0
+chr21	9884923	chr21:9884923:M	AAAATAAAATAAAATAAA	<2.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:56,20:76:255,0,255	0/1:29,11:40:188,0,255	0/0:75,0:75:0,225,255
+chr21	9888581	chr21:9888581:M	TTTTTCTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,11:33:10,0,94	0/1:15,10:36:12,0,95	0/0:33,1:40:0,75,255
+chr21	9893417	chr21:9893417:M	ACACACACACACACACACACACACGCCACACAC	<14.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,29,15:89:255,0,236,255,53,255	1/2:18,29,25:85:197,22,255,218,0,255	1/1:1,28,0:98:255,159,0,255,153,255
+chr21	9894712	chr21:9894712:M	AAAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,39,15:74:255,0,255,229,180,255	1/1:9,69,3:82:255,2,0,255,102,255	1/2:0,63,47:110:255,255,166,255,0,255
+chr21	9907030	chr21:9907030:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,26:69:100,0,139	0/1:22,23:61:92,0,145	0/1:11,16:46:59,0,96
+chr21	9908432	chr21:9908432:M	ATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTA	<9>,<11>,<15>	.	.	Motif=ATCT	GT:AD:DP:PL	1/3:0,31,15,15:70:255,255,255,255,250,255,255,0,248,255	1/2:0,27,22,0:63:255,255,232,255,0,255,255,162,239,255	1/3:0,21,0,15:53:255,255,255,255,255,255,255,0,255,255
+chr21	9917528	chr21:9917528:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:5,37,9:52:255,37,38,255,0,255	1/2:1,25,17:44:255,146,203,231,0,255	0/1:20,22,2:46:121,0,101,219,139,255
+chr21	9923070	chr21:9923070:M	ACACACACACACACACACACACACA	<8.5>,<10.5>,<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:25,23,15,13:77:255,0,255,178,254,255,255,14,255,255	0/3:31,0,23,34:89:255,255,255,51,255,255,0,255,103,129	1/3:1,19,31,23:95:255,255,255,37,38,243,255,0,50,255
+chr21	9932468	chr21:9932468:M	AAAAAAACAAACAAACAAACAAAAAAAAACAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/1:65,16:81:123,0,255	0/1:62,13:75:68,0,255	0/1:33,53:86:255,0,255
+chr21	9939035	chr21:9939035:M	ATATATATGTTATTATATATGTTATATATATATATATAATATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:35,9:44:112,0,255	0/1:19,14:33:255,0,255	0/1:17,36:53:255,0,255
+chr21	9948821	chr21:9948821:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,5:50:0,21,255	0/0:42,0:58:0,130,255	0/1:36,14:52:208,0,255
+chr21	9949904	chr21:9949904:M	AAAATAAAATAAAA	<3.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:53,65:118:255,0,255	0/1:45,75:120:255,0,255	0/1:75,63:138:255,0,255
+chr21	9956781	chr21:9956781:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:42,23:85:177,0,255	0/1:20,27:61:255,0,113	0/1:62,47:115:255,0,255
+chr21	9963353	chr21:9963353:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:41,29:73:130,0,255	0/1:28,43:73:255,0,104	0/0:56,5:70:0,125,255
+chr21	9969989	chr21:9969989:M	TGTGTGCGTGTATGTGTGTGTGTGTGT	<12.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:37,16,18:90:255,255,255,0,222,255	1/2:20,31,19:78:255,228,255,128,0,255	0/2:33,1,34:69:255,255,255,0,255,255
+chr21	9984660	chr21:9984660:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,57:86:255,0,204	1/1:15,82:98:255,54,0	0/1:25,82:108:255,0,77
+chr21	9989193	chr21:9989193:M	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTGTCTCCCTCTCTCTCTCT	<26.5>,<27.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:8,11,3:26:173,0,98,91,51,113	1/2:0,11,10:25:255,79,41,127,0,69	0/0:10,0,1:18:0,30,195,19,119,91
+chr21	9992425	chr21:9992425:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:33,17:55:74,0,247	0/1:31,11:45:20,0,235	0/1:37,16:59:23,0,255
+chr21	9994453	chr21:9994453:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3,4:25:101,0,184,19,112,115	1/2:2,13,6:36:255,31,3,152,0,102	1/2:1,9,5:20:255,31,22,72,0,39
+chr21	9997462	chr21:9997462:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,0:1:0,0,0	1/1:0,3:3:38,8,0
+chr21	10001908	chr21:10001908:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,30,27:58:255,225,154,255,0,177	1/1:2,42,12:57:255,92,0,255,1,255	1/2:0,33,19:54:255,169,64,255,0,239
+chr21	10003301	chr21:10003301:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:55,19:74:133,0,255	0/1:56,28:85:241,0,255	0/1:31,51:84:255,0,255
+chr21	10004043	chr21:10004043:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:55,32,2:91:255,0,255,255,255,255	0/1:37,39,4:85:255,0,255,255,255,255	1/2:13,40,23:78:255,69,195,255,0,255
+chr21	10018178	chr21:10018178:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,14:41:54,0,170	0/1:30,16:49:44,0,213	0/1:25,15:44:46,0,193
+chr21	10021513	chr21:10021513:M	AAATAAATAAATAAATAAATAAATAAATGAAAT	<10.2>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:57,5:64:0,66,255	0/1:38,13:51:164,0,255	0/0:55,0:66:0,165,255
+chr21	10023756	chr21:10023756:M	AAAAAAAACAAAACAA	<3>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:34,9:43:0,25,230	0/1:13,12:25:48,0,57	0/0:49,7:57:0,79,255
+chr21	10028361	chr21:10028361:M	TTTTTTTTTTTTTTT	<16>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:30,15,14,5:65:213,57,203,0,181,255,126,255,255,255	1/3:12,14,9,15:53:255,219,212,92,94,212,39,0,168,255	0/2:31,18,22,3:77:255,93,235,0,183,255,230,255,255,255
+chr21	10034590	chr21:10034590:M	AAAAGAAAAAAAAAAAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:39,10:50:42,0,255	0/1:17,18:35:205,0,188	0/0:47,1:48:0,123,255
+chr21	10039657	chr21:10039657:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:19,4,4:27:30,7,183,0,204,255	1/2:0,8,3:11:145,38,8,82,0,73	0/1:21,13,0:34:75,0,180,138,255,255
+chr21	10044280	chr21:10044280:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,7,9:26:142,36,80,0,46,158	1/1:3,26,5:35:255,53,0,221,36,255	0/1:9,16,7:33:167,0,19,63,26,215
+chr21	10052192	chr21:10052192:M	TATATATATATACGCATATATATATACACATATATATA	<4>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,7:31:118,0,255	0/1:17,6:24:77,0,255	0/0:15,1:18:0,4,255
+chr21	10069359	chr21:10069359:M	ACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:30,12:46:158,0,255	0/1:15,12:31:193,0,255	0/0:47,0:48:0,140,255
+chr21	10079378	chr21:10079378:M	GAGAGAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:76,13:89:0,13,255	0/1:57,22:80:173,0,255	0/1:56,33:89:255,0,255
+chr21	10081399	chr21:10081399:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,5:41:0,46,255	0/1:14,7:22:43,0,126	0/0:22,0:22:0,62,255
+chr21	10081542	chr21:10081542:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTTATCATCTATCTATTTATCATCTATCTATC	<16.5>,<19.5>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,1,9:10:81,91,203,19,5,0	2/2:0,0,5:5:48,62,126,13,15,0	1/2:0,3,2:5:60,19,36,53,0,61
+chr21	10082927	chr21:10082927:M	TTTTCTTTTGCTTTCTTTTGTTTTTTTT	<5.4>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:61,2:63:0,151,255	0/0:44,0:44:0,125,255	0/1:63,28:92:146,0,255
+chr21	10094384	chr21:10094384:M	AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:9:1,0,66	0/1:5,3:10:20,0,46	0/0:7,1:8:0,9,78
+chr21	10095588	chr21:10095588:M	TTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTGTTTTTG	<6.2>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:22,6:28:106,0,255	0/0:28,0:28:0,84,255	0/1:16,10:26:239,0,255
+chr21	10098968	chr21:10098968:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:25:0,69,255	0/0:35,0:35:0,96,255	0/1:22,8:30:16,0,188
+chr21	10100032	chr21:10100032:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,9:41:1,0,235	0/1:21,15:40:61,0,157	0/0:50,13:65:0,19,255
+chr21	10105041	chr21:10105041:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:20:17,0,81	0/1:5,2:9:7,0,35	0/0:11,0:17:0,14,109
+chr21	10106363	chr21:10106363:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:18:255,20,0	1/1:1,9:13:200,6,0	0/1:1,1:6:32,0,15
+chr21	10108527	chr21:10108527:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,5:11:76,0,39	0/1:6,7:19:87,0,108	0/0:14,0:16:0,41,248
+chr21	10110321	chr21:10110321:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:45,21:66:194,0,255	0/1:31,20:52:198,0,255	0/0:55,0:55:0,162,255
+chr21	10118947	chr21:10118947:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<18>	.	.	Motif=GA	GT:AD:DP:PL	0/1:8,10:26:98,0,119	0/1:0,15:32:255,0,9	0/0:9,0:25:0,40,214
+chr21	10122154	chr21:10122154:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,5:48:0,4,255	0/1:26,15:41:255,0,255	0/0:51,0:54:0,156,255
+chr21	10122778	chr21:10122778:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,4:12:19,19,75,0,11,40	0/1:3,3,0:7:17,0,18,30,23,75	0/0:12,0,2:15:0,39,161,9,114,105
+chr21	10123588	chr21:10123588:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:5,10,18:35:178,151,255,67,0,135	1/2:6,12,8:27:95,39,118,71,0,182	2/2:2,0,21:23:202,255,255,40,62,0
+chr21	10124207	chr21:10124207:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:13:168,15,0	1/1:0,16:24:255,53,0	1/1:2,16:24:255,24,0
+chr21	10135895	chr21:10135895:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:16:13,0,84	0/1:3,7:10:56,0,8	0/1:8,4:15:29,0,66
+chr21	10138622	chr21:10138622:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,4:49:0,78,255	0/0:25,1:30:0,51,255	0/1:31,11:43:29,0,255
+chr21	10149470	chr21:10149470:M	AATAAATAAATAAATAAATAA	<6.2>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:21,18:39:126,0,164	0/1:20,15:35:94,0,157	0/0:47,0:47:0,131,255
+chr21	10165429	chr21:10165429:M	TATATATGTATATTATACATATATATGCATGTATATATATGAATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:22,20:42:255,0,255	0/1:32,15:47:255,0,255	0/1:19,15:34:255,0,255
+chr21	10270636	chr21:10270636:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:45,7:53:0,71,255	0/1:30,11:41:15,0,255	0/0:31,9:40:0,7,255
+chr21	10270664	chr21:10270664:M	ATATATAATATATATCATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,7:45:0,48,255	0/1:21,11:32:42,0,255	0/1:21,9:30:23,0,255
+chr21	10271575	chr21:10271575:M	ATATCTATAATATATATTATATATATTTTATATTATATTATCTATACTTAAATATATATATAAATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:7,12:19:94,0,134	0/1:1,4:5:36,0,13	0/1:2,5:7:42,0,34
+chr21	10272705	chr21:10272705:M	ATATAATATACATTATTATATATTATATATGAAATTATATAATATAATTATATTTAATATAAGATATATATAATATGATATATAACATATATAATATA	<27>	.	.	Motif=ATATA	GT:AD:DP:PL	1/1:0,11:11:138,31,0	1/1:0,2:2:25,6,0	1/1:0,15:15:188,42,0
+chr21	10273835	chr21:10273835:M	TATATTATTATATATTATTATATTATATATAATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,58:69:255,0,104	1/1:0,29:29:255,80,0	1/1:1,46:47:255,103,0
+chr21	10273898	chr21:10273898:M	TATATATATGTTATATATATTAAATATATAATTAATATCTGTAATATATATAACATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,27:41:223,0,188	0/1:4,14:19:120,0,56	0/1:3,20:23:181,0,16
+chr21	10325022	chr21:10325022:M	ATAATATTATATAATATATAATAATATTAAATTAAATAATAATTATAATA	<17.7>	.	.	Motif=ATA	GT:AD:DP:PL	1/1:0,6:7:102,18,0	.	.
+chr21	10327150	chr21:10327150:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:39,85:167:255,0,255	0/1:30,108:165:255,0,255	0/1:36,50:170:255,0,255
+chr21	10327672	chr21:10327672:M	TTTTTTGTTTTTTTGTTTTTGTTTTTTGTTTTTT	<35>,<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:30,32,17:105:255,0,255,80,47,255	1/2:21,44,41:130:255,255,255,255,0,255	0/1:72,39,20:146:255,0,255,108,255,255
+chr21	10331685	chr21:10331685:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:165,58:227:255,0,255	0/1:122,80:212:255,0,255	0/1:132,32:198:41,0,255
+chr21	10334325	chr21:10334325:M	ATATATATATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:56,14:77:0,24,255	0/1:21,22:58:135,0,186	0/0:64,16:89:0,28,255
+chr21	10334340	chr21:10334340:M	TTTTTTTTTCTTTCTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:54,15:71:193,0,255	0/0:36,0:38:0,113,255	0/1:38,22:69:255,0,255
+chr21	10334799	chr21:10334799:M	TTTTTTCTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:49,21:72:255,0,255	0/1:50,13:67:155,0,255	0/1:65,23:93:255,0,255
+chr21	10336724	chr21:10336724:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,10,14:45:255,79,255,0,240,255	0/2:11,10,12:39:255,20,228,0,120,255	0/1:17,14,11:50:255,0,255,38,252,255
+chr21	10340305	chr21:10340305:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:127,13,51:196:255,255,255,0,255,255	0/2:91,17,62:175:255,255,255,0,255,255	0/1:88,52,19:161:255,0,255,255,255,255
+chr21	10341491	chr21:10341491:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:59,76:184:255,0,255	0/1:31,123:179:255,0,255	0/1:90,15:168:39,0,255
+chr21	10348141	chr21:10348141:M	AAAAACAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:67,101,39:210:255,0,255,255,255,255	0/1:53,106,28:189:255,0,255,255,255,255	1/2:19,116,50:189:255,255,255,255,0,255
+chr21	10348506	chr21:10348506:M	AAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:73,48,33:160:255,0,255,250,255,255	0/2:66,39,56:164:255,255,255,0,255,255	0/1:73,47,35:157:255,0,255,197,255,255
+chr21	10353496	chr21:10353496:M	TTTTTTTTGTTTTTTTTTTGTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:35,82:161:255,0,255	0/1:35,56:141:255,0,255	0/1:35,66:134:255,0,255
+chr21	10355841	chr21:10355841:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,29,2:59:255,17,0,255,59,255	1/1:1,43,3:63:255,106,0,255,84,255	1/2:5,13,14:40:255,98,168,82,0,152
+chr21	10357174	chr21:10357174:M	TATATATATATGTATATA	<10>,<12>	.	.	Motif=TA	GT:AD:DP:PL	0/1:92,52,28:190:255,0,255,56,255,255	0/2:47,17,24:88:255,255,255,0,255,255	0/1:72,43,21:146:255,0,255,120,255,255
+chr21	10357635	chr21:10357635:M	CTTTCTTTCTTT	<1.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:22,8:34:180,0,255	0/1:26,11:39:214,0,255	0/0:28,3:33:0,8,255
+chr21	10367657	chr21:10367657:M	CACACACACACACACACACACACACACAGACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/1:34,45:198:255,0,255	0/1:43,61:210:255,0,255	0/1:25,18:172:255,0,255
+chr21	10370540	chr21:10370540:M	CTAGCTAGCTAGCT	<2.5>	.	.	Motif=CTAG	GT:AD:DP:PL	0/1:183,86:269:255,0,255	0/1:152,71:223:255,0,255	0/1:167,83:250:255,0,255
+chr21	10370588	chr21:10370588:M	TCTACTATATATCCATCATCTATCTATTATCCATCCATCTATCCATCTATCTATATATGTATTTATCTAT	<16.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:45,20:74:47,0,255	0/0:50,16:72:0,2,255	0/0:51,13:81:0,29,255
+chr21	10370708	chr21:10370708:M	CTAGCTAGCTAGCT	<2.5>	.	.	Motif=CTAG	GT:AD:DP:PL	0/1:137,55:197:112,0,255	0/1:140,51:198:79,0,255	0/0:150,44:201:0,0,255
+chr21	10370723	chr21:10370723:M	TCTATCTATCTACCTATC	<3.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:53,47:108:255,0,255	0/1:58,53:117:255,0,255	0/1:70,47:134:255,0,255
+chr21	10372020	chr21:10372020:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:76,126:248:255,0,255	0/1:77,138:231:255,0,255	0/1:80,74:193:255,0,255
+chr21	10372841	chr21:10372841:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:37:44,0,61	0/1:4,14:30:63,0,34	0/1:8,5:22:3,0,52
+chr21	10376581	chr21:10376581:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,80:127:255,0,37	0/1:16,61:110:255,0,112	0/1:20,73:119:255,0,157
+chr21	10377648	chr21:10377648:M	TTTTTTTTCTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:42,31:77:92,0,228	0/1:34,28:63:97,0,160	0/0:72,25:98:0,17,255
+chr21	10379736	chr21:10379736:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:55,18:76:0,17,255	0/1:45,20:66:26,0,255	0/0:80,16:103:0,108,255
+chr21	10381537	chr21:10381537:M	ACACACACACGCATACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:42,38:80:255,0,255	0/1:31,45:78:255,0,255	0/1:64,22:87:255,0,255
+chr21	10381570	chr21:10381570:M	ACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:55,48:104:255,0,255	0/1:37,67:105:255,0,255	0/1:67,39:106:255,0,255
+chr21	10382554	chr21:10382554:M	AAAAAAAAAAAAACAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:31,7:64:34,0,255	0/1:25,11:41:154,0,255	0/1:37,14:95:171,0,255
+chr21	10382572	chr21:10382572:M	AAGAAGAAGAAGAAAGAAAGAAAACAAAAAAGAAGAAGAAGAAAGAAAGAAAAAAAAGAAAAGAA	<22.3>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,10:18:119,34,0	1/1:0,9:17:77,22,0	1/1:0,9:21:121,35,0
+chr21	10382937	chr21:10382937:M	AAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:3,8,25:57:255,57,126,21,7,0	0/2:4,0,35:72:255,156,255,0,110,18	0/1:1,25,12:64:255,0,124,87,64,115
+chr21	10386555	chr21:10386555:M	AATTAATTAATTAA	<2.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:58,94:153:255,0,255	0/1:35,115:150:255,0,194	0/1:62,108:171:255,0,255
+chr21	10386619	chr21:10386619:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,78:78:255,231,0	1/1:2,63:65:255,155,0	1/1:0,94:94:255,255,0
+chr21	10386831	chr21:10386831:M	TTTTTTGTTTTTTGGTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,15:46:102,0,255	0/0:35,0:39:0,100,255	0/1:22,29:57:255,0,187
+chr21	10387432	chr21:10387432:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:92,38:150:78,0,255	0/1:78,39:122:38,0,255	0/0:115,26:165:0,27,255
+chr21	10388268	chr21:10388268:M	AGGAGGAGGAGGAGGAGCGGGAGGAGCAGGAGGAG	<10.7>	.	.	Motif=AGG	GT:AD:DP:PL	0/1:23,13:47:28,0,120	0/1:18,12:34:33,0,88	0/0:40,12:56:0,21,255
+chr21	10388964	chr21:10388964:M	AAAAATAAAAATAAAAATAAA	<4.5>	.	.	Motif=AAAAAT	GT:AD:DP:PL	0/1:163,35:202:82,0,255	0/1:128,26:160:9,0,255	0/1:141,68:210:255,0,255
+chr21	10392835	chr21:10392835:M	TGTTTTTTGTTTGTTTTTGTATTTTTGTTTTTTTGTTTTTGT	<6.7>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/1:66,83:158:255,0,255	0/1:66,72:138:255,0,255	0/1:63,52:119:255,0,255
+chr21	10395953	chr21:10395953:M	TCTCTGTCTCCCTCTCTCTCTCTGTCTGTCTCTGTTTCTGCTTCTCTGTCTCCATCTCTTTCTCTCTCTGTGTCTCTCT	<11.7>,<12.5>	.	.	Motif=TCTCTC	GT:AD:DP:PL	0/2:10,4,7:22:95,57,255,0,112,147	0/1:4,7,2:14:122,0,76,96,38,155	0/1:14,7,3:24:93,0,255,78,205,255
+chr21	10396039	chr21:10396039:M	TCTCTGTCTCTGTCTTTCTCTCCATCTCTGTATCTGTC	<7>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/1:0,16:16:249,46,0	1/1:0,11:11:171,32,0	1/1:0,17:17:255,49,0
+chr21	10398128	chr21:10398128:M	AAAACAAAACAAA	<1.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:135,71:206:255,0,255	0/1:110,75:185:255,0,255	0/1:123,51:174:255,0,255
+chr21	10398226	chr21:10398226:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:60,8:96:0,98,255	0/1:52,25:92:188,0,255	0/0:75,3:107:0,255,255
+chr21	10399238	chr21:10399238:M	TTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,21:63:255,0,27	0/1:3,20:71:255,0,71	0/1:8,25:64:255,0,248
+chr21	10401726	chr21:10401726:M	CAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCA	<9.4>	.	.	Motif=CAAAC	GT:AD:DP:PL	1/1:13,66:122:255,153,0	1/1:19,35:110:255,73,0	1/1:10,65:103:255,134,0
+chr21	10403944	chr21:10403944:M	TTTTATTTATTTTGTTTTACTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<12.6>,<13.4>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:2,12,0:18:107,16,0,123,37,174	1/2:0,8,4:12:137,49,18,71,0,69	1/1:3,22,0:30:205,36,0,226,63,255
+chr21	10404536	chr21:10404536:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:46,15:62:92,0,255	0/1:42,28:71:255,0,255	0/0:77,9:87:0,95,255
+chr21	10405054	chr21:10405054:M	AACAACAACAACAACAACAACAACAACAAAAAACAAAGAAAACAAACAACAACAA	<18>,<19.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/2:9,3,16:35:75,105,255,0,59,64	1/2:0,8,14:32:150,90,255,84,0,127	0/2:10,2,32:56:205,255,255,0,86,8
+chr21	10405906	chr21:10405906:M	ATTTTATTTATTTTAATTTTATTTTTTTT	<5.6>	.	.	Motif=ATTTT	GT:AD:DP:PL	0/1:24,25:56:51,0,17	1/1:0,44:54:251,93,0	0/0:51,13:72:0,30,147
+chr21	10406088	chr21:10406088:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:21,13:58:247,0,255	0/1:22,19:64:255,0,255	0/1:21,9:77:255,0,255
+chr21	10411695	chr21:10411695:M	AAAACCAAACCAAACTAAACCAAAACAAAAAAAAC	<6.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:52,25:92:21,0,74	0/1:26,32:59:41,0,20	0/0:75,11:95:0,70,238
+chr21	10415921	chr21:10415921:M	AAAACAAAACAAAACAAAACAAAAC	<4>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:47,214:262:255,225,0	1/1:28,218:246:255,255,0	1/1:55,204:260:255,148,0
+chr21	10418381	chr21:10418381:M	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:22,24:164:255,0,255	0/1:10,27:102:255,0,255	0/1:3,35:143:255,0,255
+chr21	10420350	chr21:10420350:M	TTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,41:62:255,0,184	0/1:5,30:37:255,0,35	0/1:12,38:60:255,0,190
+chr21	10422009	chr21:10422009:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:50,97:147:255,0,82	1/1:9,138:147:255,255,0	0/1:50,88:138:255,0,103
+chr21	10422126	chr21:10422126:M	TTTTTTTTTTTTTTT	<13>,<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/3:7,25,39,14:110:255,238,255,193,255,255,255,99,0,255	1/3:10,26,15,26:94:255,202,255,255,255,255,255,0,69,255	1/3:4,35,33,15:117:255,217,255,255,255,255,255,0,25,255
+chr21	10423314	chr21:10423314:M	TATATATATATTTATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:167,77:244:255,0,255	0/1:114,89:203:255,0,255	0/1:182,44:226:146,0,255
+chr21	10425218	chr21:10425218:M	TTTTTTTTTTCTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:91,86,93:272:255,141,183,0,114,255	1/1:89,116,84:292:255,7,0,77,49,255	0/1:127,72,37:239:240,0,255,183,255,255
+chr21	10427526	chr21:10427526:M	ACACACACACACAAACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:138,167:313:255,0,255	0/1:228,140:371:255,0,255	0/1:173,180:360:255,0,255
+chr21	10431007	chr21:10431007:M	TTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:69:255,84,0	1/1:1,36:87:255,187,0	0/1:2,13:44:255,0,4
+chr21	10431777	chr21:10431777:M	TCTCTCTCTCT	<3.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:168,90:330:255,0,255	0/1:184,70:339:175,0,255	0/0:260,34:335:0,255,255
+chr21	10434161	chr21:10434161:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:11,84:163:255,128,0	1/1:14,107:218:255,255,0	1/1:9,101:198:255,112,0
+chr21	10434867	chr21:10434867:M	TTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.8>,<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:11,16,21:64:159,103,244,90,0,206	0/2:16,0,19:45:92,171,255,0,100,48	1/2:0,25,20:51:255,159,213,210,0,255
+chr21	10435892	chr21:10435892:M	TATTATTATTA	<2.7>	.	.	Motif=TAT	GT:AD:DP:PL	0/1:220,46:266:106,0,255	0/1:212,65:277:255,0,255	0/1:201,77:278:255,0,255
+chr21	10437769	chr21:10437769:M	ATATATATATATATATATATATATATA	<10.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,4,9:41:157,0,70,133,63,255	1/2:0,2,5:12:133,45,27,99,0,124	1/1:1,14,2:38:255,3,0,255,73,255
+chr21	10439737	chr21:10439737:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,58:108:255,0,72	1/1:1,75:109:255,116,0	0/1:29,43:98:255,0,180
+chr21	10439930	chr21:10439930:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:11,17,41:73:255,244,163,37,0,40	0/2:33,9,32:79:255,175,247,0,162,255	1/2:3,21,37:75:255,255,186,101,0,22
+chr21	10445599	chr21:10445599:M	CTTTCTTTTCTTACTTTCTTT	<2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:50,12:65:171,0,255	0/1:36,16:56:255,0,255	0/1:68,9:81:144,0,255
+chr21	10446180	chr21:10446180:M	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	<3.7>,<4.7>	.	.	Motif=TTTGTT	GT:AD:DP:PL	1/2:17,34,91:142:255,255,255,255,0,255	1/2:15,55,75:145:255,255,255,255,0,255	2/2:13,18,116:147:255,255,255,234,74,0
+chr21	10447391	chr21:10447391:M	TTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:47:255,111,0	1/1:0,14:31:255,67,0	1/1:0,6:44:255,72,0
+chr21	10447576	chr21:10447576:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,47:152:255,0,255	0/1:12,43:118:255,0,255	0/1:36,40:132:255,0,255
+chr21	10449373	chr21:10449373:M	ATATATATGTATGTATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:0,77:156:255,0,255	0/1:1,111:171:255,0,255	0/1:0,78:161:255,0,255
+chr21	10449701	chr21:10449701:M	AAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,73:138:255,0,1	1/1:0,81:129:255,255,0	0/1:48,32:124:255,0,255
+chr21	10451234	chr21:10451234:M	TTTTTTTTTTTTT	<11>,<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/3:11,22,52,46:134:255,255,255,255,255,255,255,237,0,255	1/2:6,45,75,14:145:255,255,255,214,0,46,255,255,191,255	2/3:13,45,48,43:155:255,186,255,236,255,255,255,22,0,255
+chr21	10456321	chr21:10456321:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,12,2:20:255,0,34,70,36,85	1/2:2,9,5:18:255,1,23,25,0,25	1/1:1,11,1:20:255,10,0,106,20,86
+chr21	10459762	chr21:10459762:M	TTTTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:42,86,88:218:255,255,255,255,0,255	1/2:22,103,64:191:255,255,255,255,0,255	1/2:54,70,99:228:255,255,255,255,0,255
+chr21	10461781	chr21:10461781:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:48,65:160:255,0,255	0/1:17,91:163:255,0,40	0/1:56,34:131:255,0,255
+chr21	10468480	chr21:10468480:M	TGTGTGTGTGTGTGTATGTGTGTGTGTCTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,40:67:255,0,201	1/1:3,44:59:255,62,0	0/1:45,12:71:91,0,255
+chr21	10469402	chr21:10469402:M	AACAGCAACAACAACAGCAACAACAGCAACAACAACAACAA	<15.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:33,11:51:98,0,255	0/1:35,6:46:2,0,255	0/1:41,32:80:255,0,255
+chr21	10470052	chr21:10470052:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:18:138,0,189	1/1:0,10:15:255,11,0	0/1:20,10:33:195,0,255
+chr21	10470069	chr21:10470069:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<15>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,7,30,8:59:221,166,255,68,62,30,239,221,0,255	2/2:0,0,43,7:67:194,255,255,38,154,0,244,255,1,255	1/3:0,15,5,15:49:255,144,255,255,208,255,255,0,140,255
+chr21	10471357	chr21:10471357:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:112,11,0	1/1:0,0:1:23,3,0	1/1:0,3:5:124,15,0
+chr21	10472288	chr21:10472288:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:45,98,32:177:255,0,253,255,92,255	1/2:14,100,55:169:255,238,110,255,0,255	0/1:62,81,28:176:255,0,255,255,229,255
+chr21	10474923	chr21:10474923:M	TTTTGTTTTGTTTTG	<2.8>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:53,80:133:255,0,255	0/1:41,130:171:255,0,255	0/1:52,76:134:255,0,255
+chr21	10476863	chr21:10476863:M	TTTTGTTTTTTGTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,17:65:56,0,255	0/1:36,11:47:18,0,255	0/0:67,12:80:0,59,255
+chr21	10477785	chr21:10477785:M	TATTTCTTTATTTTATTTTTATTTATTT	<6>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:34,79:122:255,0,30	1/1:27,82:109:255,54,0	0/1:32,67:125:194,0,128
+chr21	10486318	chr21:10486318:M	ATATATATATATATATATATATATA	<7.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,32:49:255,255,255,255,0,255	2/2:0,0,34:38:255,255,255,105,101,0	1/2:0,27,32:60:255,255,255,255,0,255
+chr21	10486645	chr21:10486645:M	TTTTTTTTCTTCTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:38:9,0,240	0/0:23,2:32:0,44,255	0/1:23,15:45:83,0,197
+chr21	10487145	chr21:10487145:M	TTTCTTTTTTTTTTCTTTCTTTCTTT	<5.5>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:24,28:69:255,0,255	0/1:24,26:65:255,0,240	0/1:35,28:72:255,0,255
+chr21	10489767	chr21:10489767:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:24,0,28	0/1:5,4:10:33,0,34	0/1:7,4:12:19,0,57
+chr21	10495296	chr21:10495296:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:16:37,0,140	0/0:11,0:11:0,32,178	0/0:24,1:25:0,56,255
+chr21	10497571	chr21:10497571:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:10:37,0,34	1/1:1,9:10:105,15,0	0/0:27,4:36:0,36,255
+chr21	10501513	chr21:10501513:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:25:255,65,0	1/1:0,18:25:255,53,0	1/1:0,24:26:255,77,0
+chr21	10501938	chr21:10501938:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,34:36:255,70,0	1/1:0,34:34:255,100,0	1/1:1,38:40:255,99,0
+chr21	10510877	chr21:10510877:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,31:57:255,255,167,241,0,83	2/2:0,4,29:34:255,255,242,100,49,0	1/2:0,21,25:63:255,255,126,209,0,94
+chr21	10511667	chr21:10511667:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,8,4:14:255,255,255,64,64,24,87,84,0,45	3/3:0,0,0,1:4:80,78,77,45,45,36,11,11,10,0	1/2:0,6,7,3:18:255,192,151,134,0,85,211,28,89,171
+chr21	10512046	chr21:10512046:M	TTTTCTTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:9:49,0,0	1/1:0,6:8:89,22,0	0/1:1,2:5:21,0,9
+chr21	10512370	chr21:10512370:M	TTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,120,0	1/1:0,29:29:255,87,0	1/1:3,47:54:255,70,0
+chr21	10516135	chr21:10516135:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,18:33:255,253,158,189,0,94	2/2:0,1,21:24:255,255,255,72,54,0	1/2:0,13,22:39:255,255,180,212,0,108
+chr21	10516457	chr21:10516457:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,53:53:255,157,0	1/1:0,35:35:255,103,0	1/1:0,88:88:255,255,0
+chr21	10516879	chr21:10516879:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT	<10.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:7,6:17:20,0,55	0/1:5,8:13:47,0,17	0/0:24,1:28:0,61,255
+chr21	10516923	chr21:10516923:M	TATCTATCTGTCTATCTGTCTATCTATCTATCTATCT	<11.2>,<12.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,22:35:255,209,110,117,0,22	2/2:0,0,15:17:255,174,131,45,37,0	1/2:0,10,12:28:255,146,75,92,0,24
+chr21	10518572	chr21:10518572:M	CAAACAAACAAACAAACAAACAAACAAA	<6>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,60:60:255,178,0	1/1:0,34:34:255,100,0	1/1:0,69:69:255,204,0
+chr21	10519316	chr21:10519316:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,38:40:255,99,0	1/1:2,22:24:255,35,0	1/1:2,47:51:255,104,0
+chr21	10527134	chr21:10527134:M	CTCTCTCTCTCTCTCTCTCTCTCTC	<14.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:22,16:40:255,0,255	0/0:32,0:32:0,95,255	0/1:46,10:59:50,0,255
+chr21	10528201	chr21:10528201:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,38,16:54:255,255,116,255,0,255	2/2:0,2,33:37:255,255,255,105,75,0	1/2:5,63,19:88:255,241,74,255,0,255
+chr21	10529184	chr21:10529184:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,4:22:7,0,221	0/0:10,0:13:0,34,184	0/1:17,6:24:31,0,224
+chr21	10540010	chr21:10540010:M	AAAAACCAAAAACAACAACAACAAACAAAAACAAAAAACCAAAACAAAA	<7.5>	.	.	Motif=AAAAAC	GT:AD:DP:PL	0/1:29,11:40:166,0,255	0/0:27,0:27:0,81,255	0/1:33,19:52:255,0,255
+chr21	10541479	chr21:10541479:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:37,20:59:255,0,255	0/0:29,0:31:0,90,255	0/1:60,17:79:228,0,255
+chr21	10559916	chr21:10559916:M	ATATATATCTATATATACATATATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:34,8:42:54,0,255	0/0:27,0:27:0,81,255	0/1:54,22:76:255,0,255
+chr21	10567108	chr21:10567108:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0,0:29:0,81,255,83,255,255	0/2:8,0,6:14:49,90,255,0,119,79	0/1:14,14,1:34:255,0,255,255,195,255
+chr21	10572005	chr21:10572005:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,12:35:43,0,144	0/1:12,9:22:47,0,70	0/1:32,13:48:38,0,217
+chr21	10575827	chr21:10575827:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:57,1:58:0,148,255	0/0:39,0:39:0,107,255	0/1:66,24:93:48,0,255
+chr21	10576826	chr21:10576826:M	TATACATATATACATATATATATATATATATATATATATATATATATATATA	<18>,<27>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,12,5:26:255,0,194,255,13,255	0/0:0,0,0:2:0,6,58,5,23,17	1/2:0,8,4:13:214,23,79,196,0,192
+chr21	10584880	chr21:10584880:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,11:26:169,93,126,130,0,197	0/1:12,8,0:21:30,0,59,83,85,220	1/2:16,21,15:53:89,15,166,80,0,255
+chr21	10585242	chr21:10585242:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<28>,<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,14,1:28:216,0,159,135,106,187	0/2:6,0,11:17:67,85,185,0,60,16	0/1:32,8,3:43:41,0,255,45,255,255
+chr21	10588198	chr21:10588198:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,17:49:37,0,179	0/0:28,1:31:0,69,255	0/1:34,35:73:173,0,145
+chr21	10592806	chr21:10592806:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>	.	.	Motif=GT	GT:AD:DP:PL	0/0:44,0:45:0,133,255	0/0:31,0:33:0,98,255	0/1:42,16:64:140,0,255
+chr21	10597401	chr21:10597401:M	TTTTCTTTTTTCTTTTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:2,0,93	0/0:5,1:6:0,3,59	0/1:12,11:28:136,0,101
+chr21	10599800	chr21:10599800:M	TTAGTTAGTTAGTTAGTTAGTTAGTTAGTT	<6.5>	.	.	Motif=TTAG	GT:AD:DP:PL	0/0:49,0:63:0,21,255	0/1:20,16:36:100,0,150	0/0:60,1:72:0,67,255
+chr21	10611944	chr21:10611944:M	AAAAAAAAAAA	<12>,<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,18,0,26:45:255,255,255,255,200,242,142,0,126,164	3/3:0,0,0,45:45:255,255,255,255,255,255,135,131,108,0	2/3:0,15,26,22:64:255,255,255,178,66,36,227,48,0,182
+chr21	10615293	chr21:10615293:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,4,22:41:255,189,242,0,114,196	2/2:0,2,24:30:255,255,255,83,58,0	0/1:21,23,11:57:202,0,92,78,124,255
+chr21	10617403	chr21:10617403:M	GAAGGAAGGAAAAAGGAGGAAAGGAAGGGAGGGAGGAAGGAAG	<1.8>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,5:5:255,15,0	1/1:0,1:1:52,3,0	1/1:0,2:2:106,6,0
+chr21	10617559	chr21:10617559:M	GAAAGAAAGAAGGAAAGAAGGAAGGAAGGAGAAAAGAAAGAAAAGAAAGGAAAAGAAAAAAAAGAAAGA	<16.5>,<17.5>	.	.	Motif=GAAA	GT:AD:DP:PL	2/2:0,0,9:15:47,64,107,16,19,0	2/2:0,0,8:8:45,62,100,16,22,0	1/2:0,10,16:31:184,86,139,100,0,52
+chr21	10617758	chr21:10617758:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,30:51:177,0,83	1/1:1,39:40:255,94,0	0/1:21,40:61:252,0,56
+chr21	10620402	chr21:10620402:M	AAAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,15,8:23:255,86,18,153,0,85	1/1:0,20,0:20:255,60,0,248,51,189	1/2:0,16,8:24:255,86,15,162,0,91
+chr21	10637210	chr21:10637210:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,20:20:255,59,0
+chr21	10641224	chr21:10641224:M	ACACACACACACACACACACACGCACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,35:35:255,92,0	1/1:0,21:23:235,60,0	1/1:0,51:68:255,178,0
+chr21	10650893	chr21:10650893:M	ACACACACACACACACACACACACACACACACACACA	<25.5>,<26.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,5,5,0:12:253,45,12,51,0,20,195,41,50,173	2/2:0,0,3,0:3:85,31,22,9,7,0,53,29,9,44	1/3:0,3,1,8:18:255,197,162,135,104,91,73,0,7,33
+chr21	10732811	chr21:10732811:M	CCTTCCCCTTCC	<1.8>	.	.	Motif=CCTTCC	GT:AD:DP:PL	1/1:2,47:49:255,93,0	1/1:2,36:38:231,69,0	1/1:0,73:73:255,160,0
+chr21	10738615	chr21:10738615:M	CATTCCATTTGATTCCATTCGATTC	<27>	.	.	Motif=CATTC	GT:AD:DP:PL	0/1:42,25:67:109,0,255	0/1:34,16:50:48,0,255	0/1:72,27:99:40,0,255
+chr21	10738670	chr21:10738670:M	CATTCGATTCCATTCC	<27>	.	.	Motif=CATTC	GT:AD:DP:PL	0/1:54,25:79:73,0,255	0/1:39,16:55:33,0,255	0/1:81,27:108:13,0,255
+chr21	10738725	chr21:10738725:M	ATTCCATTCCA	<27>	.	.	Motif=ATTCC	GT:AD:DP:PL	0/1:62,25:87:56,0,255	0/1:30,16:46:64,0,255	0/1:82,27:109:17,0,255
+chr21	10774031	chr21:10774031:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,56:56:255,165,0	1/1:0,42:42:255,124,0
+chr21	10775774	chr21:10775774:M	AATAAAGTAAATAAATAAAATAAATAAATAAAT	<9>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:1,30:31:255,68,0	1/1:1,19:20:255,35,0	1/1:1,45:46:255,113,0
+chr21	12997128	chr21:12997128:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:62,2:64:0,154,255	0/0:70,2:75:0,185,255	0/1:46,21:69:129,0,255
+chr21	12999938	chr21:12999938:M	AAAAAATAAAAAAAAAAAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,24:43:182,0,88	0/1:24,8:35:9,0,206	0/1:14,23:40:181,0,60
+chr21	13000071	chr21:13000071:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.5>,<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/2:7,17,13:37:255,9,93,58,0,105	0/1:8,31,0:40:255,0,97,255,157,255	0/1:14,28,10:53:255,0,224,219,169,255
+chr21	13001123	chr21:13001123:M	AAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGA	<17.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,7:10:40,0,3	1/1:0,6:7:55,15,0	0/0:12,0:15:0,37,134
+chr21	13005366	chr21:13005366:M	GTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:28,13:42:117,0,255	0/1:27,23:53:255,0,255	0/0:42,8:51:0,5,255
+chr21	13007695	chr21:13007695:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,0:14:0,0,96	0/0:14,1:19:0,19,155	0/1:13,7:26:77,0,112
+chr21	13011665	chr21:13011665:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,5:25:22,0,191	0/1:16,9:26:55,0,165	0/0:28,2:31:0,59,255
+chr21	13012234	chr21:13012234:M	AAAAAACAAAAAAAAAAAACAAAAA	<26>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,23,10:39:255,254,190,255,0,255	1/2:11,13,18:44:255,255,255,21,0,255	0/1:10,17,0:39:112,0,45,124,57,255
+chr21	13014603	chr21:13014603:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,15,7:44:88,0,197,109,93,255	0/2:29,2,17:49:82,190,255,0,253,240	0/1:24,20,9:53:100,0,248,134,126,255
+chr21	13016283	chr21:13016283:M	AAAAAAAAAAGAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:24,5,12:41:132,82,255,0,255,255	0/1:27,18,1:47:255,0,255,255,255,255	0/2:32,0,8:41:8,107,255,0,255,255
+chr21	13016950	chr21:13016950:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,12:47:180,0,255	0/1:34,29:65:255,0,255	0/1:28,11:45:178,0,255
+chr21	13017296	chr21:13017296:M	TTTTTTTATTTTTTTGTTTTTTATTTTTTATTTATTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	0/2:18,8,10:36:255,27,255,0,255,255	0/1:26,15,0:41:255,0,255,196,255,255	0/2:23,5,5:33:122,0,255,0,255,255
+chr21	13017975	chr21:13017975:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,13:40:255,0,255	0/1:24,14:39:255,0,255	0/1:20,17:39:255,0,255
+chr21	13020152	chr21:13020152:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:45,11:56:26,0,255	0/0:46,2:53:0,117,255	0/1:36,14:56:92,0,255
+chr21	13020463	chr21:13020463:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,8:14:67,0,26	0/1:5,2:8:3,0,51	0/1:6,5:13:33,0,46
+chr21	13021130	chr21:13021130:M	AAAAAACAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:47,37:84:255,0,255	0/1:36,42:79:255,0,255	0/1:46,33:80:255,0,255
+chr21	13021854	chr21:13021854:M	AAACAAAAAAACAAACAAAAACAAACAAACAAACAAA	<6.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:32,35:71:255,0,255	0/1:27,22:55:255,0,255	0/1:33,22:57:255,0,255
+chr21	13026281	chr21:13026281:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:33,15,18:67:255,84,255,0,255,255	0/2:38,0,38:76:255,255,255,0,255,255	0/1:35,45,0:80:255,0,255,255,255,255
+chr21	13028775	chr21:13028775:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,0:3:20,0,20	0/1:3,5:13:147,0,42	0/1:2,3:8:60,0,50
+chr21	13032595	chr21:13032595:M	AAAATAAAATAAAATAAAATAAAATTAAAATAAAATAAAATAAAATAAAATAAAAATAAA	<7.8>,<8.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:18,4,3:25:74,0,255,14,255,255	0/2:5,0,6:11:134,82,188,0,121,104	0/1:12,10,0:22:211,0,255,139,255,255
+chr21	13034143	chr21:13034143:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:34,38:78:255,0,255	0/1:37,34:73:255,0,255	0/1:32,35:72:255,0,255
+chr21	13034350	chr21:13034350:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0,0:1:0,3,27,3,27,27	2/2:0,0,3:5:85,83,88,4,12,0	0/1:1,4,0:7:118,0,6,108,24,125
+chr21	13034668	chr21:13034668:M	AAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:38,10:60:158,0,255	0/1:31,21:56:255,0,255	0/1:33,1:54:17,0,255
+chr21	13034845	chr21:13034845:M	TTTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,5,4:11:157,28,51,48,0,71	0/1:2,10,0:13:242,0,16,199,48,225	0/2:8,0,3:12:47,57,253,0,203,194
+chr21	13039472	chr21:13039472:M	AATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:25,8:40:0,20,86	0/1:11,7:18:2,0,23	0/0:19,0:28:0,38,103
+chr21	13039507	chr21:13039507:M	AAAAAGAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:43:255,0,109	0/1:15,12:32:136,0,146	0/0:43,4:49:0,59,255
+chr21	13043998	chr21:13043998:M	TTTTCTTTTTTTCTTTCTCTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:18:189,0,69	0/1:4,8:15:168,0,66	0/1:11,0:22:21,0,241
+chr21	13092357	chr21:13092357:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,6,10:27:183,65,135,0,76,201	0/1:15,10,3:28:86,0,116,67,155,255	0/1:10,21,0:33:184,0,62,220,152,255
+chr21	13093615	chr21:13093615:M	AAAAAAAAAAAAAGAAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:36:255,88,0	1/1:2,30:33:255,65,0	1/1:1,41:42:255,106,0
+chr21	13102290	chr21:13102290:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:41,7:48:0,45,255	0/1:27,10:37:21,0,230	0/0:30,6:36:0,25,255
+chr21	13137904	chr21:13137904:M	ATAATAATAAAATAAAATAAAATAAAA	<4.4>	.	.	Motif=ATAAA	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:28,0:28:0,82,255	0/1:40,15:55:120,0,255
+chr21	13172591	chr21:13172591:M	TTTTTTCTTTTTCTTTCTTTCTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,8:25:147,0,255	0/0:17,0:17:0,51,255	0/1:20,9:31:166,0,255
+chr21	13192562	chr21:13192562:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,55,0	1/1:1,12:13:183,21,0	1/1:0,17:18:255,42,0
+chr21	13196897	chr21:13196897:M	AAAAAAAAAAAAAAAGAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,11:14:121,0,4	0/1:16,6:23:19,0,173	0/1:12,13:25:116,0,102
+chr21	13211837	chr21:13211837:M	TATATATATATATATATTATATATATATATATATATATA	<18.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,14:17:255,32,0	0/1:0,1:2:12,0,6	0/1:3,4:7:51,0,33
+chr21	13224899	chr21:13224899:M	AAAACAAAACAAAACAAGACAAAACAAAACAAGACAAAACAAAACAAAA	<10>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,18:18:255,53,0	1/1:0,20:20:255,59,0
+chr21	13234311	chr21:13234311:M	AAAAAAGAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,17:37:215,0,255	1/1:0,49:50:255,147,0	0/1:30,11:41:84,0,255
+chr21	13246762	chr21:13246762:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,13:23:255,0,182	1/1:0,32:33:255,99,0	0/1:13,16:29:255,0,255
+chr21	13251063	chr21:13251063:M	ATATATATATATA	<8.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,6,4:19:65,0,119,70,124,255	2/2:0,0,4:4:49,49,49,11,11,0	0/0:17,3,1:24:0,7,255,56,255,255
+chr21	13251105	chr21:13251105:M	ATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:14,4:21:0,13,255	0/1:0,4:6:31,0,8	0/0:18,1:23:0,55,255
+chr21	13255290	chr21:13255290:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:21:133,0,115	1/1:0,9:14:169,29,0	0/1:15,8:23:76,0,202
+chr21	13259015	chr21:13259015:M	CTCTTTCTCTTT	<1.7>	.	.	Motif=CTCTTT	GT:AD:DP:PL	0/1:15,16:31:255,0,255	1/1:0,27:27:255,81,0	0/1:13,20:33:255,0,255
+chr21	13261623	chr21:13261623:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,16:38:255,0,255	1/1:0,29:29:255,87,0	0/1:16,18:35:255,0,255
+chr21	13264531	chr21:13264531:M	CACACACACACACACACACACACACACATGCACACACACACA	<23>,<25>,<26>	.	.	Motif=CA	GT:AD:DP:PL	0/1:12,9,0,0:22:201,0,255,237,255,255,240,255,255,255	1/2:0,8,8,0:19:255,208,177,212,0,204,255,138,235,255	0/3:18,1,0,10:30:211,240,255,174,255,255,0,255,255,255
+chr21	13265399	chr21:13265399:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:134,0,96	1/1:3,18:22:250,2,0	0/1:21,12:35:132,0,255
+chr21	13267824	chr21:13267824:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:14,16:30:255,0,255	1/1:0,20:22:255,60,0	0/1:9,14:23:255,0,181
+chr21	13268681	chr21:13268681:M	ACACACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,8:25:77,0,187	1/1:1,32:36:255,58,0	0/1:15,15:32:179,0,197
+chr21	13272272	chr21:13272272:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,19,11:54:255,0,255,105,161,229	0/2:13,11,24:49:251,77,255,0,12,13	0/2:25,8,11:45:83,14,255,0,197,167
+chr21	13278047	chr21:13278047:M	GAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAG	<16.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:15,14:30:187,0,196	1/1:0,14:14:251,41,0	0/1:13,13:27:169,0,160
+chr21	13279121	chr21:13279121:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,13:28:172,0,181	1/1:0,38:38:255,112,0	0/1:26,22:48:255,0,255
+chr21	13290891	chr21:13290891:M	CACACACACACACACAC	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,22:40:255,0,210	1/1:0,33:34:255,100,0	0/1:19,24:45:255,0,225
+chr21	13301756	chr21:13301756:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,10:22:107,0,141	0/1:16,8:26:69,0,188	0/1:16,9:26:78,0,196
+chr21	13316249	chr21:13316249:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,21:47:254,0,255	0/1:20,17:38:189,0,250	0/1:22,20:42:240,0,255
+chr21	13330524	chr21:13330524:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<7.8>,<10.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,18,8:26:255,143,159,255,0,255	1/2:0,8,4:12:255,68,83,203,0,196	0/1:6,10,0:16:232,0,125,253,104,255
+chr21	13335024	chr21:13335024:M	TTTCTTTCTTTCTTTCTTTCTTTTTTTCT	<8.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:21,14:35:166,0,255	0/1:21,13:34:135,0,255	0/1:10,9:19:112,0,132
+chr21	13343201	chr21:13343201:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:23,0,23	1/1:1,6:8:92,7,0	0/1:6,6:12:66,0,67
+chr21	13346590	chr21:13346590:M	TTTTTTTTATTTATTATTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,8:15:174,0,145	0/1:10,12:22:255,0,204	0/1:5,16:21:255,0,72
+chr21	13355921	chr21:13355921:M	ATATACATATATATATATATATATATATATA	<12.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:7,1,11:22:211,113,255,0,147,109	0/1:2,12,0:17:255,0,3,164,36,158	1/2:0,9,7:17:255,81,33,117,0,67
+chr21	13355951	chr21:13355951:M	AGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGA	<31.5>,<67.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,4,4:10:85,37,22,61,0,117	2/2:0,0,4:4:51,51,51,11,11,0	0/0:0,0,0:3:0,5,19,6,24,32
+chr21	13358752	chr21:13358752:M	GAAAAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAA	<6.6>,<6.8>	.	.	Motif=GAAAA	GT:AD:DP:PL	0/1:5,10,0:20:153,0,37,64,38,72	0/2:3,0,7:11:48,35,74,0,36,15	0/1:4,9,0:17:114,0,51,50,49,73
+chr21	13359519	chr21:13359519:M	CCCTGACCCTGACCCGTGACCCTGACCCTTAACCCCTGACCCTGACCCCTATCCCCTGACCCTGACCC	<4.7>,<8>	.	.	Motif=CCCTGA	GT:AD:DP:PL	0/2:7,0,4:11:64,85,246,0,161,149	0/0:6,0,0:6:0,18,156,18,156,156	0/1:7,3,1:11:41,0,152,40,138,198
+chr21	13363222	chr21:13363222:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:25:139,0,158	0/1:13,18:35:226,0,148	0/1:10,9:20:103,0,130
+chr21	13381720	chr21:13381720:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,14,0:25:255,0,218,255,255,255	1/1:1,21,0:22:255,38,0,255,63,255	1/2:0,13,11:25:255,255,255,255,0,255
+chr21	13384063	chr21:13384063:M	TATACATATATATATACACACATATATATGTGTGTATATATATATACACACACATATATATATATAT	<34.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,6:16:16,0,32	0/1:4,2:7:7,0,16	1/1:1,4:7:40,8,0
+chr21	13384129	chr21:13384129:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,7,0:26:38,0,76,86,142,255	0/1:19,5,0:28:3,0,116,77,197,255	1/2:0,7,13:31:255,255,255,100,0,154
+chr21	13389552	chr21:13389552:M	TATATATATATATATATATATATATATATACATATA	<8>,<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,10,2:23:208,0,244,217,91,255	0/1:1,4,0:6:94,0,13,96,11,105	1/2:0,12,11:24:255,124,237,255,0,255
+chr21	13389637	chr21:13389637:M	AACAAAACAAAGCAAA	<2.2>	.	.	Motif=AACAA	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:27,0:27:0,79,255	0/1:11,28:39:255,0,90
+chr21	13392823	chr21:13392823:M	TGTTTGTTTGTTTGTTTGTTT	<4.2>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:26,0:26:0,77,255	0/1:12,10:22:124,0,161
+chr21	13393041	chr21:13393041:M	CACACCACATACACATACACACACACACACACACACACACACACACACA	<21.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:4,0,10:14:137,177,255,0,71,30	0/2:9,0,14:24:167,236,255,0,169,99	1/2:0,7,8:15:255,137,187,218,0,182
+chr21	13405436	chr21:13405436:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:40:0,118,255	0/0:44,0:45:0,132,255	0/1:20,17:37:206,0,255
+chr21	13409899	chr21:13409899:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<19>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,2,0:13:2,0,59,10,46,83	0/2:3,0,3:7:25,41,99,0,31,20	1/2:0,11,1:21:162,36,15,164,0,255
+chr21	13409934	chr21:13409934:M	GAGAGAGAGAGAGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<22>,<28>	.	.	Motif=GA	GT:AD:DP:PL	0/2:8,0,7:18:171,197,255,0,178,174	0/2:1,0,2:5:58,61,81,0,22,16	1/2:0,4,3:12:197,88,71,116,0,115
+chr21	13425654	chr21:13425654:M	CACACACACACACACACACACACACACACACACACACACAC	<14.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,16,0:27:255,0,188,255,242,255	0/1:15,19,0:39:255,0,255,255,255,255	1/2:0,18,15:36:255,255,255,255,0,255
+chr21	13431318	chr21:13431318:M	AAAAGAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:18:87,0,96	0/1:12,7:19:58,0,140	1/1:1,19:21:255,44,0
+chr21	13431490	chr21:13431490:M	AGAAAAAAAAAGAAAAGAAA	<4.2>	.	.	Motif=AGAAA	GT:AD:DP:PL	0/0:34,9:43:0,30,197	0/0:31,5:36:0,45,205	0/1:22,14:36:25,0,88
+chr21	13432655	chr21:13432655:M	AGAGAGAGAGAGAGAGAGAGAGAGAGA	<9.5>,<12.5>	.	.	Motif=AG	GT:AD:DP:PL	0/2:17,0,11:31:86,173,255,0,255,181	0/2:10,0,13:28:125,193,255,0,144,75	1/2:1,14,22:48:255,197,255,215,0,255
+chr21	13434213	chr21:13434213:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,2,9:28:66,73,255,0,191,144	0/2:12,0,10:27:56,107,255,0,208,140	1/2:3,26,16:46:255,124,124,255,0,219
+chr21	13435224	chr21:13435224:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,15,1:45:226,0,255,168,255,255	0/1:38,13,3:56:147,0,255,118,255,255	0/2:26,13,24:64:255,80,255,0,170,158
+chr21	13438466	chr21:13438466:M	AAAAAAAAAAAAAAAA	<13>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,6:20:38,95,255,0,176,121	0/2:10,0,5:18:40,90,255,0,145,96	0/1:14,8,6:29:147,0,255,125,118,255
+chr21	13440249	chr21:13440249:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,1:39:0,96,255	0/0:34,1:35:0,85,255	0/1:12,12:24:148,0,149
+chr21	13444327	chr21:13444327:M	AACAACAACAACAACAACAA	<6.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:8,7:18:28,0,28	0/1:20,17:41:70,0,73	0/1:17,11:29:27,0,75
+chr21	13448839	chr21:13448839:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,3:18:12,0,195	0/0:21,3:25:0,21,255	0/1:10,9:22:134,0,114
+chr21	13449197	chr21:13449197:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,5:10:54,69,195,0,83,55	0/2:3,1,7:11:90,77,148,0,32,17	0/1:4,3,1:8:59,0,87,34,50,77
+chr21	13449686	chr21:13449686:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,2:8:13,0,70,0,25,70	0/2:7,0,4:12:37,68,201,0,99,87	0/1:2,6,0:8:82,0,12,104,30,182
+chr21	13458146	chr21:13458146:M	ATAATAATAATAATAATAATAATAATGATAA	<11.3>	.	.	Motif=ATA	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/1:12,10:22:115,0,151	0/0:26,0:26:0,77,255
+chr21	13461891	chr21:13461891:M	AAAAAAAAAAAAGAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,1:33:0,80,255	0/0:36,2:40:0,82,255	0/1:18,8:31:41,0,198
+chr21	13467543	chr21:13467543:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:39:0,117,255	0/1:32,12:46:191,0,255	0/0:45,0:47:0,138,255
+chr21	13468039	chr21:13468039:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/0:31,2:34:0,65,255	0/1:17,14:33:152,0,217
+chr21	13468346	chr21:13468346:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,51,255	0/1:5,4:10:77,0,104	0/0:11,0:11:0,33,255
+chr21	13472158	chr21:13472158:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/0:30,0:30:0,90,255	0/1:20,24:45:255,0,255
+chr21	13474558	chr21:13474558:M	AAAAAAAAAAAAAAA	<16>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/3:11,0,1,5:17:109,132,255,72,255,255,0,197,255,255	1/2:1,9,9,1:20:255,146,109,114,0,111,255,114,148,255	0/0:22,1,1,0:28:0,50,255,49,255,255,70,255,255,255
+chr21	13476731	chr21:13476731:M	TTTTTTCTTTTTCTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:27:0,73,255	0/1:12,15:28:180,0,138	0/0:32,1:33:0,79,255
+chr21	13478586	chr21:13478586:M	CACACACACACACACACACACACACACACACA	<17>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,13:32:88,0,135	1/1:2,31:35:255,61,0	0/0:22,1:28:0,62,255
+chr21	13481274	chr21:13481274:M	TGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:15,0,5,0:21:98,133,255,0,255,255,141,255,255,255	2/3:0,0,5,4:12:255,255,246,109,104,84,158,135,0,141	0/1:18,10,0,0:31:211,0,255,255,255,255,255,255,255,255
+chr21	13482544	chr21:13482544:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,0,15:30:186,231,255,0,255,178	1/2:0,23,14:41:255,204,124,255,0,255	0/0:32,0,4:36:0,96,255,35,255,255
+chr21	13485069	chr21:13485069:M	AAGAAGAAGAAGAAGAAG	<8>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:11,10:22:130,0,149	0/1:15,10:28:109,0,232	0/1:29,14:48:143,0,255
+chr21	13487504	chr21:13487504:M	AAAAGAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,1:47:0,118,255	0/1:28,15:44:120,0,255	0/0:42,1:46:0,114,255
+chr21	13489516	chr21:13489516:M	ACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,20:33:212,0,104	0/1:11,18:29:184,0,80	0/1:17,18:36:169,0,162
+chr21	13490554	chr21:13490554:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<8.5>,<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,2,12,2:20:255,209,184,33,13,0,241,146,17,216	1/2:0,6,7,0:13:255,113,75,97,0,59,255,93,96,244	2/3:0,0,4,3:7:175,134,122,48,47,28,65,54,0,45
+chr21	13490611	chr21:13490611:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:21:123,24,0	0/1:3,6:10:34,0,13	1/1:0,0:6:34,10,0
+chr21	13492464	chr21:13492464:M	ACACACACACACACACACACACACACACACACAGAGAGACACACACA	<24.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,11,1:22:116,0,55,112,52,255	2/2:0,0,6:8:203,203,203,24,24,0	0/1:22,9,0:34:38,0,255,138,255,255
+chr21	13499795	chr21:13499795:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/1:15,16:31:194,0,175	0/1:19,15:36:190,0,243
+chr21	13501779	chr21:13501779:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:15,8:25:64,0,202	0/0:22,1:25:0,55,255
+chr21	13502393	chr21:13502393:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:1,16,77,0,53,50	1/2:1,2,3:6:47,33,66,17,0,40	0/1:3,3,0:7:38,0,27,56,39,123
+chr21	13506423	chr21:13506423:M	TATACATATACATACTTACATATGTATAATACATATACATA	<2.3>	.	.	Motif=TATACA	GT:AD:DP:PL	0/1:19,11:30:193,0,255	0/1:12,5:17:74,0,250	0/1:28,4:32:3,0,255
+chr21	13507637	chr21:13507637:M	CTTTCTTTCTTTC	<2.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:17,16:33:212,0,232	0/1:20,20:40:246,0,245	0/0:40,0:40:0,118,255
+chr21	13510435	chr21:13510435:M	TATATATATATATATATATATATATAT	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,22:30:185,5,0	1/1:1,9:12:112,21,0	1/1:4,20:26:166,3,0
+chr21	13518477	chr21:13518477:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:8:0,21,182	1/1:0,8:10:231,24,0	0/1:3,5:10:136,0,57
+chr21	13524301	chr21:13524301:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:6,0,72	1/1:0,15:18:198,39,0	0/1:7,6:17:55,0,54
+chr21	13535924	chr21:13535924:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,4:45:0,58,255	0/1:15,18:35:223,0,170	0/0:34,1:36:0,87,255
+chr21	13555888	chr21:13555888:M	TATATATATATATATATATATATATATATA	<12>,<19>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,0,3:10:64,85,255,0,195,186	1/1:0,3,0:3:94,9,0,94,9,94	0/0:5,0,0:7:0,17,158,15,156,155
+chr21	13566921	chr21:13566921:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:24,0,26:51:255,255,255,0,255,255	1/2:1,24,21:47:255,255,255,255,0,255	0/0:40,0,1:41:0,121,255,102,255,255
+chr21	13585167	chr21:13585167:M	AAAAAAAAAAAAAAAAGAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:21:145,0,255	0/1:8,5:14:98,0,185	0/0:13,0:17:0,47,255
+chr21	13595695	chr21:13595695:M	TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTATTTT	<9.8>,<10.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	2/2:0,0,8:9:155,155,155,24,23,0	1/1:0,3,0:5:92,10,0,65,10,57	2/2:0,0,6:6:113,113,113,18,18,0
+chr21	13597040	chr21:13597040:M	CACACAGACACACACACACACACACACACACACACACACACACACA	<26>	.	.	Motif=CA	GT:AD:DP:PL	0/0:6,0:6:0,18,180	1/1:0,6:8:189,21,0	0/0:4,0:6:0,18,148
+chr21	13597248	chr21:13597248:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:8:0,0,68	1/1:0,0:1:2,1,0	0/1:7,3:10:21,0,88
+chr21	13602769	chr21:13602769:M	AAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAA	<34>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:7:90,29,75,56,0,60	2/2:0,0,1:1:14,17,26,3,3,0	1/2:1,1,3:5:41,29,78,8,0,12
+chr21	13603076	chr21:13603076:M	ACACACCACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,4:13:81,0,221	0/1:0,5:7:127,0,19	0/1:20,7:30:140,0,255
+chr21	13615824	chr21:13615824:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:22:84,0,185	0/0:22,1:24:0,53,255	0/1:6,13:21:185,0,57
+chr21	13616139	chr21:13616139:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:12,0,10:26:248,255,255,0,255,255	2/2:0,0,17:20:255,255,255,56,58,0	0/1:13,12,0:27:255,0,255,255,255,255
+chr21	13619420	chr21:13619420:M	AAAAAATAAAAATAAAAAACAAAACAAAAACAAAACAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	.	1/1:0,8:8:221,24,0
+chr21	13627446	chr21:13627446:M	AAAAAAACAAAAAAAAAAAAGAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:12,0,178	1/1:0,9:9:159,26,0	0/0:17,2:19:0,20,255
+chr21	13678394	chr21:13678394:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:205,35,0	.	0/1:1,4:5:55,0,2
+chr21	13711753	chr21:13711753:M	ATGCTTATGCTTAT	<1.7>	.	.	Motif=ATGCTT	GT:AD:DP:PL	0/0:11,1:12:0,8,255	0/1:8,3:11:52,0,186	0/0:11,0:11:0,33,255
+chr21	13782884	chr21:13782884:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.2>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:10,12:22:161,0,124	0/0:15,0:16:0,44,255	0/1:10,15:25:202,0,110
+chr21	13795297	chr21:13795297:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:91,9,0	0/0:1,0:2:0,3,28	0/1:1,1:3:20,0,23
+chr21	13809190	chr21:13809190:M	ATTATTATTATTATTATT	<6.3>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,16:37:9,0,27	0/0:38,3:45:0,60,166	1/1:0,26:33:88,28,0
+chr21	13809206	chr21:13809206:M	TTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,12:33:255,251,255,242,0,255	0/1:13,16,0:32:255,0,255,255,255,255	1/2:0,4,22:29:255,255,255,97,0,32
+chr21	13809599	chr21:13809599:M	TTTTTTTTTTGTCCTTTTTTTTTTTTTTTTTTT	<12>,<31>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,7:10:175,150,171,33,0,12	0/2:2,2,2:8:34,0,63,0,2,35	1/2:0,3,8:12:232,170,187,73,0,49
+chr21	13818174	chr21:13818174:M	TTTTTTTTTTTTCTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,20:37:255,255,255,255,0,255	1/2:1,17,20:39:255,255,255,255,0,255	2/2:1,0,38:39:255,255,255,97,117,0
+chr21	13827697	chr21:13827697:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,25:36:255,0,101	0/0:37,3:40:0,64,255	0/1:12,10:24:114,0,169
+chr21	13828862	chr21:13828862:M	TATATATATTATTAAATATATAT	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/0:31,3:34:0,23,255	0/1:14,5:19:72,0,255	0/0:30,2:32:0,43,255
+chr21	13829683	chr21:13829683:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:39:230,0,255	0/0:53,0:53:0,156,255	0/1:15,12:27:139,0,195
+chr21	13830168	chr21:13830168:M	ACACACACACACACCCATACTCACCCACCTACACACAGAAACACACCCACACACACAC	<10>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,7:23:118,0,255	0/1:22,5:27:53,0,255	0/1:18,6:24:86,0,255
+chr21	13836136	chr21:13836136:M	TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,11:22:252,0,187	0/0:9,0:10:0,30,255	0/1:9,5:15:109,0,201
+chr21	13873837	chr21:13873837:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,10:33:91,0,255	0/0:39,1:45:0,113,255	0/1:12,18:31:216,0,108
+chr21	13909190	chr21:13909190:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:14:0,8,158	0/1:8,4:14:23,0,107	0/0:20,3:24:0,12,255
+chr21	13912347	chr21:13912347:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:26,0,152	0/1:8,11:21:136,0,85	0/0:21,1:23:0,50,255
+chr21	13912519	chr21:13912519:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,12:25:182,0,87	0/1:6,8:17:109,0,62	0/1:7,3:10:23,0,92
+chr21	13914343	chr21:13914343:M	TTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,6:8:135,0,12	0/1:5,3:9:64,0,108	0/1:5,2:7:33,0,112
+chr21	13916535	chr21:13916535:M	AAAAAAAAAAAAAAAA	<15>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,17,5:27:255,109,68,255,0,255	1/2:0,8,8:20:255,197,179,147,0,213	1/2:0,16,5:24:255,129,88,255,0,255
+chr21	13925531	chr21:13925531:M	TTTTTTTTTTTGTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:18:128,0,74	0/1:11,10:22:107,0,133	0/1:11,9:20:101,0,135
+chr21	13934234	chr21:13934234:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,12:30:140,0,254	0/1:21,24:45:255,0,244	0/1:30,29:59:255,0,255
+chr21	13939365	chr21:13939365:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,20:48:255,0,255	0/1:14,19:35:255,0,255	0/1:23,22:46:255,0,255
+chr21	13940759	chr21:13940759:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,11:33:108,0,255	0/1:19,17:36:192,0,228	0/1:18,19:37:236,0,217
+chr21	13941491	chr21:13941491:M	TTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,10:20:255,250,211,191,0,150	1/2:0,13,3:26:255,78,26,255,0,255	1/2:0,12,14:29:255,255,255,255,0,251
+chr21	13943764	chr21:13943764:M	TTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,6:9:189,21,0	1/1:0,12:14:255,37,0
+chr21	13944986	chr21:13944986:M	AAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,16:37:255,0,255	0/1:13,12:26:255,0,255	0/1:8,21:34:255,0,130
+chr21	13963526	chr21:13963526:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,27:38:255,0,87	0/1:17,26:43:255,0,178	0/1:18,21:40:255,0,225
+chr21	13966218	chr21:13966218:M	TGTATGTGTATATGTGCATGTGTCTATGTGTATGTGTAT	<7.5>	.	.	Motif=TGTATG	GT:AD:DP:PL	0/1:19,18:37:231,0,252	0/1:15,4:19:15,0,212	0/1:20,11:31:111,0,255
+chr21	13973878	chr21:13973878:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<20>	.	.	Motif=TG	GT:AD:DP:PL	0/1:13,14,0:31:255,0,255,255,255,255	0/2:10,0,6:17:52,102,255,0,179,133	0/1:11,18,0:32:255,0,255,255,208,255
+chr21	13981522	chr21:13981522:M	CCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,1:1:28,3,0	.	1/1:0,3:4:100,12,0
+chr21	13998484	chr21:13998484:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,34:38:255,255,255,97,72,0	1/2:1,31,15:47:255,235,118,255,0,255	1/2:2,21,23:47:255,255,255,255,0,254
+chr21	13999108	chr21:13999108:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1:34:0,83,255	0/1:27,10:38:41,0,255	0/0:29,1:33:0,79,255
+chr21	14000638	chr21:14000638:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:29:255,77,0	1/1:0,20:26:255,65,0	1/1:0,17:20:255,56,0
+chr21	14003480	chr21:14003480:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:18:255,34,0	1/1:1,30:33:255,79,0	1/1:1,31:32:255,76,0
+chr21	14019889	chr21:14019889:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:245,0,255	1/1:0,37:37:255,109,0	0/0:38,1:41:0,102,255
+chr21	14025002	chr21:14025002:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:34:172,0,245	1/1:3,32:36:255,52,0	0/0:38,0:40:0,115,255
+chr21	14029013	chr21:14029013:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:24:150,0,107	1/1:5,32:38:255,28,0	0/0:22,4:30:0,3,255
+chr21	14031160	chr21:14031160:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:8,0,4:14:84,92,255,0,211,200	1/2:0,5,2:8:171,44,29,112,0,102	0/0:9,0,0:9:0,27,250,27,251,252
+chr21	14047139	chr21:14047139:M	GAGTGGAGTGGAGTGGAGTGGAGAGTGGAGTGGAGTGGAGCGGAGCGGAGCAGAGTGGAGTGGAGTGGA	<14.8>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:4,5:9:65,0,47	0/0:15,0:15:0,44,255	0/1:2,7:9:100,0,10
+chr21	14058640	chr21:14058640:M	GGCCAGGGCCAGGGCACAGGCAGGGGCAGGGCCTGGATAAGGGCAGGGTCAGGGATATGGCAGGACCAGGGTCCAGGCCAGGGCCAGGGTCCAGG	<3.3>	.	.	Motif=GGCCAG	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,29:29:255,87,0	1/1:0,32:32:255,96,0
+chr21	14060241	chr21:14060241:M	CCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	0/1:3,1:5:4,0,53	0/0:6,0:6:0,18,106	0/1:1,4:5:58,0,4
+chr21	14062713	chr21:14062713:M	GGGGGGGGGGG	<10>,<12>	.	.	Motif=G	GT:AD:DP:PL	1/2:0,1,1:2:30,17,23,17,0,23	1/1:0,6,0:6:102,18,0,118,18,172	0/2:2,0,4:7:52,69,132,0,29,17
+chr21	14065631	chr21:14065631:M	TATATATATATATATATATATATATATATATATATATATATATAT	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,3:5:155,15,0	1/1:0,1:3:27,3,0	1/1:0,2:2:55,6,0
+chr21	14079985	chr21:14079985:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:27:167,0,175	0/0:36,2:38:0,76,255	0/1:20,21:42:255,0,244
+chr21	14081510	chr21:14081510:M	TTATTATTATTATTA	<6>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:33,6:39:0,21,255	0/1:8,5:13:36,0,80	0/0:30,0:30:0,86,255
+chr21	14081523	chr21:14081523:M	TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA	<12.7>,<13.7>	.	.	Motif=TAG	GT:AD:DP:PL	0/0:31,0,0:34:0,102,255,102,255,255	0/2:7,1,14:26:255,172,255,0,198,184	0/1:24,14,0:38:231,0,255,185,255,255
+chr21	14085976	chr21:14085976:M	TTTTTTTTTTTTTTCTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:22:84,0,175	0/0:30,0:31:0,88,255	0/1:13,13:28:161,0,161
+chr21	14088389	chr21:14088389:M	AATATAATTAAAAATATAATATATAATTATAAATATAGTATATAATTATAATTATA	<7.3>	.	.	Motif=AATATA	GT:AD:DP:PL	1/1:0,5:5:131,15,0	1/1:0,1:1:26,3,0	1/1:0,0:1:3,1,0
+chr21	14094056	chr21:14094056:M	AATAAATAAATAAATAAATAAATAAATAAATAAAT	<6.8>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,14:18:255,50,0	1/1:0,7:10:174,26,0	1/1:0,0:4:9,3,0
+chr21	14094088	chr21:14094088:M	AATTAATTAATTAATTTAATT	<2.2>,<7.2>,<8.2>	.	.	Motif=AATT	GT:AD:DP:PL	2/3:0,0,13,14:27:255,255,255,230,230,151,213,214,0,135	1/2:0,2,8,0:10:255,206,210,76,0,52,200,125,75,178	1/3:0,7,0,8:15:255,215,194,255,128,255,255,0,255,238
+chr21	14095297	chr21:14095297:M	TTTTTTTGTTTGTTTTTTGCTTTTTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,0:21:45,0,250	0/1:3,4:11:103,0,68	0/1:1,2:8:77,0,15
+chr21	14097272	chr21:14097272:M	TTTTTTATTTTTATTTTTATTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:29:200,0,183	0/1:10,9:19:106,0,124	1/1:0,21:21:255,62,0
+chr21	14100420	chr21:14100420:M	AAAAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20,0:34:255,0,255,255,255,255	0/2:12,3,15:31:255,206,255,0,255,255	1/2:0,16,16:33:255,255,190,255,0,202
+chr21	14100728	chr21:14100728:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/1:12,10:24:71,0,110	0/0:12,0:14:0,37,169	1/1:3,17:20:188,16,0
+chr21	14102653	chr21:14102653:M	AAAAAAAGAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:30:117,0,255	0/1:16,11:27:115,0,205	1/1:0,36:36:255,106,0
+chr21	14106744	chr21:14106744:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,16,10:27:255,166,213,255,0,255	0/1:11,19,0:30:247,0,106,255,163,255	0/2:12,0,11:23:132,197,255,0,183,150
+chr21	14107600	chr21:14107600:M	ACTCACTCACT	<1.8>	.	.	Motif=ACTC	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/1:9,19:28:255,0,81	0/1:23,25:48:255,0,255
+chr21	14110338	chr21:14110338:M	ATTTTTTTATTTATTTGTTTATTT	<5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:29,17:46:191,0,255	0/1:16,17:33:210,0,191	0/0:38,0:38:0,112,255
+chr21	14111844	chr21:14111844:M	TTTTGTTTTGTTTT	<2.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:26,17:43:255,0,255	1/1:0,39:39:255,117,0	0/1:25,23:48:255,0,255
+chr21	14114178	chr21:14114178:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,1,15:26:202,242,255,0,113,103	1/2:1,13,11:25:255,173,240,207,0,255	0/1:12,9,1:22:98,0,162,142,164,255
+chr21	14116010	chr21:14116010:M	GTGTGTGGGAGTGTGTGGGTGTGTGTG	<8.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:15,15:30:255,0,255	0/1:14,17:31:255,0,255
+chr21	14129799	chr21:14129799:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:3:26,7,0	1/1:0,3:5:46,12,0	1/1:0,0:2:14,5,0
+chr21	14129810	chr21:14129810:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:42:255,0,255	0/0:30,0:31:0,90,255	0/1:20,28:51:255,0,255
+chr21	14138203	chr21:14138203:M	AAAAATAAAAATAAA	<2.7>	.	.	Motif=AAAAAT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:19,12:31:214,0,255	0/1:32,20:52:255,0,255
+chr21	14141387	chr21:14141387:M	TTTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,24,18:42:255,255,220,255,0,255	0/1:17,17,0:36:255,0,255,255,255,255	0/2:22,2,23:50:255,255,255,0,255,255
+chr21	14141628	chr21:14141628:M	TTGTTGTTGTTTTGTTGT	<5>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,44:44:255,129,0	0/1:20,9:29:69,0,255	0/1:19,13:32:134,0,239
+chr21	14152072	chr21:14152072:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:10,11:21:150,0,131	0/0:6,0:6:0,18,109	0/1:6,7:13:93,0,74
+chr21	14163093	chr21:14163093:M	TATATATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,48:49:255,145,0	0/1:16,21:38:255,0,195	0/1:32,28:60:255,0,255
+chr21	14174541	chr21:14174541:M	TTTATTTTATTTTATTTTATTTTATTTT	<6.6>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:14,14:28:174,0,174	0/1:14,13:27:167,0,186
+chr21	14176176	chr21:14176176:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:20:105,0,141	1/1:0,14:14:242,41,0	0/1:12,7:20:76,0,155
+chr21	14176722	chr21:14176722:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:50:0,150,255	0/1:13,12:26:255,0,255	0/1:21,15:40:255,0,255
+chr21	14185883	chr21:14185883:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:45:0,134,255	0/1:17,18:36:255,0,255	0/1:18,13:33:255,0,255
+chr21	14191377	chr21:14191377:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:10:82,0,27	0/1:4,4:11:65,0,37	0/1:8,8:17:100,0,91
+chr21	14196127	chr21:14196127:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,18:19:255,55,0	1/1:0,27:27:255,79,0
+chr21	14196156	chr21:14196156:M	AAAAAAAAAAAACAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,1,3:25:17,36,255,0,255,255	1/2:0,7,4:16:255,76,34,152,0,117	0/1:23,6,1:31:97,0,255,96,255,255
+chr21	14197027	chr21:14197027:M	ACACACACACACACACACACACATACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:8,15:23:201,0,75	0/1:13,21:34:255,0,140
+chr21	14202992	chr21:14202992:M	AAACAAACAAAC	<2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:47,0:50:0,142,255	0/1:16,18:35:230,0,202	0/1:27,25:55:255,0,255
+chr21	14203857	chr21:14203857:M	AGAAAGAAAGAAA	<5.2>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:21,15:37:255,0,255	1/1:0,40:40:255,120,0	0/1:17,19:36:255,0,255
+chr21	14213003	chr21:14213003:M	ATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:11,8:19:203,0,254	0/1:28,12:40:255,0,255
+chr21	14213292	chr21:14213292:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	<12.8>,<13.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:0,4,7:11:247,130,100,64,0,43	2/2:0,0,15:16:255,255,255,45,44,0	1/2:0,9,7:16:255,126,82,140,0,119
+chr21	14214810	chr21:14214810:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:41:0,102,255	0/1:23,26:51:255,0,255	0/1:22,19:41:228,0,255
+chr21	14226620	chr21:14226620:M	AAAAAAAAAAAAAAAACAAACAAAAA	<25>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3,0:14:13,0,158,53,167,242	0/1:9,14,1:25:178,0,91,227,112,255	0/2:9,2,8:20:94,112,255,0,99,123
+chr21	14232691	chr21:14232691:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:33:0,77,255	0/1:12,13:27:152,0,136	0/0:27,1:33:0,75,255
+chr21	14235342	chr21:14235342:M	AAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1,0:45:0,114,255,135,255,255	0/2:20,0,7:27:119,178,255,0,255,255	0/1:24,14,0:39:150,0,255,255,255,255
+chr21	14235352	chr21:14235352:M	AGAGAGAGAGAGAGAGA	<9>	.	.	Motif=AG	GT:AD:DP:PL	0/0:40,0:41:0,79,226	0/0:33,0:34:0,66,187	0/1:20,14:36:14,0,46
+chr21	14243225	chr21:14243225:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/2:7,0,7:15:180,200,255,0,190,170	0/1:6,5,0:12:108,0,153,133,173,255	2/2:0,0,9:10:255,255,255,27,27,0
+chr21	14243744	chr21:14243744:M	GAAAGAAAGAGAGAAA	<3.5>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:21,17:38:255,0,255	0/0:32,0:32:0,96,255	1/1:0,38:38:255,114,0
+chr21	14250797	chr21:14250797:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:21:0,43,255	0/0:15,2:20:0,23,250	0/1:12,10:24:113,0,152
+chr21	14253390	chr21:14253390:M	TAAATAAATAAA	<2.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/0:37,0:37:0,106,255	0/0:50,0:50:0,144,255	0/1:24,23:51:197,0,249
+chr21	14254070	chr21:14254070:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/0:16,0,1:17:0,48,255,33,255,255	0/2:7,0,3:10:20,41,213,0,112,85	0/1:8,7,0:16:165,0,175,123,130,213
+chr21	14254572	chr21:14254572:M	ATATATATAATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/0:32,0:32:0,94,255	0/1:26,16:42:183,0,255
+chr21	14256500	chr21:14256500:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,3:19:28,0,255	0/0:23,0:23:0,69,255	1/1:0,13:15:255,41,0
+chr21	14257908	chr21:14257908:M	TTTCTTTGTTTCTTTCTTT	<6.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:11,4:17:52,0,226	0/0:12,0:12:0,36,255	1/1:0,15:19:255,31,0
+chr21	14258823	chr21:14258823:M	CAAAACAAAACAAAACAAACAAAA	<5>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/1:9,20:32:66,4,0	0/0:37,0:38:0,76,226	1/1:0,36:38:219,74,0
+chr21	14268220	chr21:14268220:M	ATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:14,20:34:255,0,171	0/1:8,13:21:179,0,84	0/1:21,9:30:84,0,255
+chr21	14270958	chr21:14270958:M	TATATATATATATATATATA	<13>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,8:34:164,0,255	0/0:21,0:26:0,57,255	0/1:1,7:24:239,0,5
+chr21	14270998	chr21:14270998:M	TATATATATATAATATA	<9.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,5,3:28:17,0,165,17,204,255	0/0:31,1,0:32:0,76,255,93,255,255	1/2:0,8,6:14:195,71,33,76,0,58
+chr21	14276705	chr21:14276705:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9,0:9:164,27,0,164,27,164	1/1:0,8,1:9:149,26,0,123,9,120	1/2:1,7,4:12:186,53,36,87,0,100
+chr21	14277463	chr21:14277463:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:38:0,83,255	0/1:20,10:31:82,0,255	0/1:18,6:33:64,0,253
+chr21	14291384	chr21:14291384:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:10:49,0,61	0/0:11,0:12:0,35,198	0/1:7,11:20:165,0,65
+chr21	14291457	chr21:14291457:M	GTGTGTGTGTGTGTGTGTGTGTGT	<8>,<14>,<15>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,20,1,14,0:35:255,255,255,255,245,255,255,0,255,255,255,255,255,255,255	3/4:0,0,2,10,10:22:255,255,255,255,255,255,179,179,142,115,199,201,115,0,141	1/2:0,19,19,0,0:40:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
+chr21	14292535	chr21:14292535:M	TGAATGAATGAATGAATGAATGAA	<7>	.	.	Motif=TGAA	GT:AD:DP:PL	0/1:21,23:44:255,0,255	0/1:12,16:28:208,0,136	0/1:22,18:40:221,0,255
+chr21	14295225	chr21:14295225:M	ACACACACACACATGCACACACACACGCACACACACACACATACACATATATATACACACACACACAC	<35>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,12:12:225,35,0	1/1:1,10:11:159,15,0	1/1:0,12:12:219,35,0
+chr21	14296463	chr21:14296463:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:38:255,92,0	1/1:0,34:36:255,105,0	1/1:1,33:35:255,84,0
+chr21	14297077	chr21:14297077:M	TTTATTTGTTTATTTACTTATTTTTATTTTTTATTTATTTATTATTTATTTATTTATTTATTCATTCATTTATTTATTTATTTATTT	<19.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:4,2:6:39,0,95	1/1:0,1:2:28,3,0	1/1:0,3:3:84,9,0
+chr21	14298756	chr21:14298756:M	ATATATATATATATATAT	<8>,<10.5>,<12>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,0,7,10:22:255,255,255,194,210,153,139,196,0,152	1/3:0,16,0,5:21:255,139,93,255,98,255,248,0,255,255	0/2:10,1,12,0:23:176,224,255,0,131,151,209,255,215,255
+chr21	14303560	chr21:14303560:M	AAAAAAAAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<40>,<44>,<51>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,9,5:14:255,255,255,134,135,108,245,245,0,230	1/3:0,11,0,4:15:255,105,74,255,107,255,255,0,255,255	2/3:0,0,1,5:8:175,177,179,132,134,125,45,45,0,30
+chr21	14304123	chr21:14304123:M	TGTGTGTGTGTGTGTGTGTGTGTGTTGTTTGTTTGTATGTGTG	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:14,0,24:38:255,255,255,0,255,153	0/1:10,11,0:22:255,0,224,255,175,255	0/2:16,0,18:34:231,255,255,0,255,195
+chr21	14312436	chr21:14312436:M	ACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:24,15:40:255,0,255	0/0:38,0:38:0,114,255	0/1:20,14:34:255,0,255
+chr21	14327266	chr21:14327266:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,22:38:255,0,186	0/0:21,2:24:0,35,255	0/1:9,16:26:226,0,88
+chr21	14340482	chr21:14340482:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:38:255,0,221	0/0:40,1:42:0,103,255	0/1:17,14:32:160,0,230
+chr21	14345905	chr21:14345905:M	AAGGAAGGAAGGAAGGAAGGAAGG	<7>	.	.	Motif=AAGG	GT:AD:DP:PL	1/1:2,8:10:76,3,0	0/0:18,2:20:0,31,196	1/1:0,11:11:137,30,0
+chr21	14351353	chr21:14351353:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,16:24:225,0,76	0/0:20,3:24:0,18,255	0/1:12,16:30:220,0,129
+chr21	14351997	chr21:14351997:M	ATATATATATATATATAATATATATATATA	<14>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:2,4:6:55,0,18	1/1:0,23:23:255,68,0
+chr21	14355255	chr21:14355255:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<16>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,7:11:104,0,22	1/1:0,14:14:241,41,0	1/1:0,13:14:239,41,0
+chr21	14366385	chr21:14366385:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:11,10:22:122,0,130	0/0:41,2:44:0,93,255
+chr21	14366686	chr21:14366686:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:23:0,49,255	0/1:9,9:18:102,0,102	0/0:20,1:22:0,46,255
+chr21	14369241	chr21:14369241:M	CCAGCCCAGCC	<2>	.	.	Motif=CCAGC	GT:AD:DP:PL	0/1:14,16:30:255,0,255	0/1:19,17:36:255,0,255	0/0:37,0:37:0,111,255
+chr21	14378625	chr21:14378625:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:36:0,106,255	0/1:17,8:26:147,0,255	0/0:32,0:34:0,101,255
+chr21	14389997	chr21:14389997:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12>,<16>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,24,0,11:36:255,201,234,255,191,255,255,0,255,255	1/2:0,16,16,0:32:255,255,255,255,0,255,255,255,255,255	3/3:0,0,4,24:28:255,255,255,255,255,255,82,84,10,0
+chr21	14391124	chr21:14391124:M	TTTGTTTGTTTGTTTG	<3>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:42,0:44:0,115,255	0/1:25,19:47:232,0,255	0/0:50,0:54:0,127,255
+chr21	14391868	chr21:14391868:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,5:41:0,36,255	0/1:15,6:22:30,0,143	0/0:31,4:35:0,44,255
+chr21	14394492	chr21:14394492:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:15:0,39,255	0/1:9,4:14:76,0,196	0/0:11,0:13:0,36,255
+chr21	14394572	chr21:14394572:M	GGGAGAGGGAGAGAGAGAG	<2.2>	.	.	Motif=GGGAGA	GT:AD:DP:PL	0/1:13,17:30:240,0,161	1/1:0,51:51:255,150,0	0/0:26,0:27:0,77,255
+chr21	14395059	chr21:14395059:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:38:213,0,255	0/1:14,18:36:241,0,151	0/0:42,2:46:0,89,255
+chr21	14396299	chr21:14396299:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,25:55:255,0,255	1/1:0,45:46:255,135,0	0/0:42,3:45:0,78,255
+chr21	14403219	chr21:14403219:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,25:38:255,0,131	0/1:17,13:31:139,0,218	0/0:29,1:30:0,70,255
+chr21	14403381	chr21:14403381:M	TTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTGTATTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:37,0,20	1/1:1,7:8:101,7,0	0/0:14,0:14:0,41,243
+chr21	14405802	chr21:14405802:M	TATTTACTTATTTATTT	<3.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:15,27:42:255,0,255	0/1:31,23:55:255,0,255	0/0:45,0:46:0,135,255
+chr21	14405812	chr21:14405812:M	TTTATTTTTATTTT	<1.7>	.	.	Motif=TTTATT	GT:AD:DP:PL	0/1:16,27:43:255,0,255	0/1:32,25:57:255,0,255	0/0:46,0:46:0,138,255
+chr21	14413530	chr21:14413530:M	TATTTTTATTTTATTTT	<3.5>	.	.	Motif=TATTTT	GT:AD:DP:PL	0/1:18,21:39:255,0,255	0/1:16,18:34:255,0,255	0/0:52,0:52:0,156,255
+chr21	14425316	chr21:14425316:M	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTATTTT	<7.6>,<8.6>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/2:0,17,10:27:255,189,113,255,0,248	1/2:0,10,7:17:255,126,77,179,0,131	0/2:12,0,9:21:196,166,255,0,255,255
+chr21	14429727	chr21:14429727:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:42:255,0,255	0/1:18,10:35:232,0,255	0/1:17,23:41:255,0,255
+chr21	14433765	chr21:14433765:M	ACAAACAAACAAACAAAC	<4.8>	.	.	Motif=ACAA	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,38:38:255,114,0	0/1:18,24:42:255,0,255
+chr21	14436442	chr21:14436442:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:23,3,0	1/1:0,4:4:137,12,0	1/1:0,0:1:22,3,0
+chr21	14436859	chr21:14436859:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,1:2:39,15,12,17,0,12	1/2:0,1,4:5:79,55,52,16,0,2	1/2:1,3,5:9:125,55,71,34,0,26
+chr21	14438576	chr21:14438576:M	AAAAAAAAAAAAAAAAAA	<19>,<21>,<22>,<25>	.	.	Motif=A	GT:AD:DP:PL	2/4:0,0,5,0,7:12:255,255,255,198,198,183,255,255,198,255,148,143,0,89,127	3/4:0,0,1,3,3:8:195,194,193,127,127,116,93,93,76,82,102,101,34,0,90	1/2:0,9,8,0,0:20:255,216,188,150,0,221,255,143,255,255,255,228,255,255,255
+chr21	14449137	chr21:14449137:M	TCTTTCTTTCTTTCTTTCTTT	<7.2>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:11,7:22:120,0,255	0/1:11,6:21:93,0,255	0/0:25,0:27:0,75,255
+chr21	14449155	chr21:14449155:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,5:14:97,0,168	0/1:9,6:18:104,0,200	0/1:13,0:20:1,0,255
+chr21	14451021	chr21:14451021:M	TTCTTCTCCTTCATTCTTCT	<6.3>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:22,19:41:255,0,255	0/1:21,19:40:255,0,255	0/0:43,0:43:0,129,255
+chr21	14452766	chr21:14452766:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,15:21:217,0,21	0/1:15,6:21:41,0,196	0/1:8,13:23:164,0,87
+chr21	14476391	chr21:14476391:M	AGAGAGAAAGAAAGAGAGAGAGAGA	<67.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:17,4:21:0,22,255	0/1:13,8:21:19,0,255	0/0:45,0:45:0,135,255
+chr21	14487330	chr21:14487330:M	TTTATCTTATTTATTTTTTAT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:24,16:44:34,0,126	1/1:0,20:22:158,37,0	0/0:44,0:45:0,106,255
+chr21	14487348	chr21:14487348:M	TATATATATATAT	<7.5>,<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:25,5,13:43:236,233,255,0,255,255	1/2:0,6,15:21:255,255,255,93,0,115	0/0:45,0,0:46:0,131,255,136,255,255
+chr21	14493575	chr21:14493575:M	ACACACACACACACACACACACACACACACACACACACA	<16.5>,<20.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,8,0:19:255,139,189,255,0,255,255,139,255,255	1/3:0,13,2,8:23:255,216,207,255,100,255,255,0,255,255	0/2:8,0,5,1:15:55,96,255,0,147,107,55,255,130,255
+chr21	14499492	chr21:14499492:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,10:34:255,180,95,255,0,255	1/2:0,18,15:34:255,255,159,255,0,223	2/2:0,3,31:36:255,255,255,101,46,0
+chr21	14507839	chr21:14507839:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11,0:24:136,0,173,203,206,255	0/1:19,14,1:37:174,0,240,254,255,255	0/2:19,1,17:39:210,255,255,0,255,247
+chr21	14513502	chr21:14513502:M	TGTGTGTGTTTGTGTGTGCGTGTGTGTGTGTCTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:28,19:47:227,0,255	0/1:8,20:28:255,0,62	0/1:19,12:31:134,0,255
+chr21	14521901	chr21:14521901:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,38:41:255,65,0	1/1:2,33:35:255,68,0	0/1:23,25:50:255,0,255
+chr21	14527761	chr21:14527761:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:21,0,49	0/1:1,4:7:117,0,9	0/1:0,3:4:76,0,5
+chr21	14530317	chr21:14530317:M	AAAAAAAAAAAAAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:7:85,0,15	1/1:0,1:2:32,4,0	0/0:4,0:7:0,21,161
+chr21	14534517	chr21:14534517:M	TTTTTTTCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,2:23:0,31,255	0/0:20,3:23:0,15,255	0/1:19,18:38:217,0,245
+chr21	14541324	chr21:14541324:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,14:37:255,0,255	0/1:14,22:37:255,0,255	0/1:14,17:35:255,0,255
+chr21	14541988	chr21:14541988:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:21,1,17:40:255,255,255,0,255,255	0/2:19,1,18:39:255,255,255,0,255,255	0/1:24,21,2:49:255,0,255,255,255,255
+chr21	14545537	chr21:14545537:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/0:31,1:32:0,76,255	0/1:29,21:50:237,0,255
+chr21	14546670	chr21:14546670:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,27:42:255,0,139	0/1:19,24:48:255,0,214	0/1:22,23:45:255,0,255
+chr21	14549929	chr21:14549929:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:41:0,120,255	0/0:38,0:41:0,119,255	0/1:19,15:35:255,0,255
+chr21	14554683	chr21:14554683:M	TTTTGTTTTCTTTTTCTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:11:23,0,96	0/1:7,5:13:48,0,93	0/1:2,2:6:19,0,39
+chr21	14569129	chr21:14569129:M	TAAAAAAAAAAATAAAAATA	<3.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/1:23,22:45:255,0,255	0/1:21,17:39:255,0,255	0/0:28,2:31:0,43,255
+chr21	14584000	chr21:14584000:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:255,0,255	0/1:18,19:41:255,0,255	1/1:0,29:32:255,95,0
+chr21	14587745	chr21:14587745:M	TTATTTATTTATTTATTTATTTTTTA	<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:20,25:49:255,0,203	0/1:12,6:18:43,0,137	0/0:27,0:28:0,79,255
+chr21	14605808	chr21:14605808:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<11.2>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:23,0:27:0,59,255	0/1:4,4:8:50,0,50	0/0:16,0:16:0,47,255
+chr21	14615314	chr21:14615314:M	AAAAAAGAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,17:36:217,0,255	0/0:61,0:61:0,179,255	1/1:0,39:39:255,115,0
+chr21	14615864	chr21:14615864:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,0:1:0,0,0	0/0:2,0:4:0,6,54	1/1:0,3:4:82,9,0
+chr21	14618651	chr21:14618651:M	TGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15>,<17>,<20>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,2,12:17:211,242,255,169,255,255,71,71,0,34	2/3:1,0,10,13:29:255,255,255,181,255,255,251,250,0,217	1/2:0,15,12,0:33:255,255,243,255,0,255,255,255,255,255
+chr21	14618710	chr21:14618710:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,9:25:73,0,169	0/0:43,0:45:0,127,255	0/0:27,5:33:0,17,255
+chr21	14649773	chr21:14649773:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,11,7:19:255,183,149,189,0,255	1/2:0,10,8:19:255,210,178,168,0,252	1/1:2,27,0:29:255,52,0,255,87,255
+chr21	14653851	chr21:14653851:M	ACACACACACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,58:58:255,174,0	1/1:0,35:35:255,105,0	1/1:0,52:52:255,156,0
+chr21	14660177	chr21:14660177:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,19,9:30:255,182,102,255,0,255	1/2:2,14,11:27:255,157,116,173,0,190	1/1:0,41,1:42:255,123,0,255,106,255
+chr21	14667322	chr21:14667322:M	ATATATATATATATATATATATATATATATATATATATATATATATATAT	<10>,<14>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,13,12:30:255,255,255,255,0,255	1/1:0,13,0:14:255,40,0,255,40,255	2/2:0,0,8:10:255,255,255,30,30,0
+chr21	14671988	chr21:14671988:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:54,0:55:0,162,255	0/1:19,10:30:98,0,247	0/0:40,0:41:0,120,255
+chr21	14672151	chr21:14672151:M	TTTTTTTTTTTTTTTT	<12>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,13:37:255,255,255,255,0,255	1/2:1,14,14:29:255,224,255,255,0,255	2/2:1,0,21:28:255,255,255,63,82,0
+chr21	14683617	chr21:14683617:M	GAAGGAAGGAAGGAAAGAAGAAAGGAAGAAAGGAAGGTAGGAAGGAGGGAAGGAAGGAAGG	<16.2>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:2,6:11:68,4,0	0/0:6,0:7:0,8,58	1/1:0,4:6:68,16,0
+chr21	14683660	chr21:14683660:M	GGAGGGAAGGAAGGAAGGCAGGGAGGGAGGGAGGGAAGGGA	<11.2>	.	.	Motif=GGAG	GT:AD:DP:PL	0/1:12,4:16:14,0,140	0/0:5,1:6:0,3,60	1/1:0,2:3:30,6,0
+chr21	14693109	chr21:14693109:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:35:225,0,206	0/1:12,11:25:122,0,158	0/1:18,11:29:116,0,243
+chr21	14693958	chr21:14693958:M	ACACACACACACACACACACACACACACACACACA	<15.5>,<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22,0,0:23:255,69,0,255,69,255,255,69,255,255	1/2:3,13,7,0:23:255,68,185,255,0,255,255,220,255,255	1/3:0,13,0,9:23:255,255,219,255,242,255,255,0,255,255
+chr21	14701868	chr21:14701868:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,21:41:255,0,244	0/0:29,0:29:0,85,255	1/1:2,42:45:255,96,0
+chr21	14702524	chr21:14702524:M	TTTTTTTGTTTTTTGTTTTTTTTTGTATTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:36:255,105,0	0/1:18,16:34:184,0,220	0/1:12,20:32:255,0,126
+chr21	14706667	chr21:14706667:M	GAATTAATGAATGAATGAAT	<6>	.	.	Motif=GAAT	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/0:29,0:29:0,85,255	0/1:24,17:41:197,0,255
+chr21	14710598	chr21:14710598:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:11:5,0,131	0/1:8,2:12:3,0,120	0/1:4,5:11:62,0,56
+chr21	14717701	chr21:14717701:M	AAAGAAGAAAGAAAGAAAGAAA	<6.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:56,0:56:0,164,255	0/1:15,15:33:183,0,199
+chr21	14718249	chr21:14718249:M	AAACAAACAAACAAACAAACAAACA	<8.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:55,0:55:0,165,255	0/0:33,0:33:0,99,255	0/1:15,18:33:255,0,255
+chr21	14724402	chr21:14724402:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:5:0,15,84	0/1:3,3:9:27,0,47	0/0:10,0:11:0,32,181
+chr21	14731524	chr21:14731524:M	TTTTCTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23,1:25:255,69,0,255,53,255	1/2:1,4,11:17:237,140,152,51,0,23	1/2:0,11,3:14:255,45,12,190,0,153
+chr21	14732360	chr21:14732360:M	TTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:99,17,0	1/1:0,6:10:127,24,0	1/1:0,8:10:164,29,0
+chr21	14733281	chr21:14733281:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,3:6:106,46,30,39,0,30	0/2:2,1,1:5:19,3,22,0,17,41	1/1:1,5,0:6:63,2,0,66,17,89
+chr21	14734369	chr21:14734369:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:41:255,119,0	1/1:1,39:43:255,108,0	1/1:0,33:34:255,99,0
+chr21	14740792	chr21:14740792:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:1,47:48:255,123,0	1/1:1,51:52:255,135,0
+chr21	14744410	chr21:14744410:M	AAAAAAACAAAACAAAACAAAACAAAACAAAACAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:13,21:34:255,0,255	0/1:13,9:22:174,0,255
+chr21	14751721	chr21:14751721:M	AAAGGAAAAAAAAGGAGAGGAGAGAACAGGAAAGGAGAGAAGAGGAGAAGAAAGGAAAGGAA	<2.4>,<10.4>	.	.	Motif=AAAGG	GT:AD:DP:PL	0/2:13,4,8:28:108,59,255,0,161,215	0/1:5,8,1:17:178,0,159,184,140,255	0/1:8,8,1:32:155,0,255,184,255,255
+chr21	14753289	chr21:14753289:M	AATTGAATTGA	<2>	.	.	Motif=AATTG	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:23,22:45:255,0,255	0/1:22,33:55:255,0,255
+chr21	14757527	chr21:14757527:M	ACACGCACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,13:34:255,0,255	1/1:0,30:30:255,90,0	0/1:28,13:42:255,0,255
+chr21	14760579	chr21:14760579:M	AAATAAATAAATAAAAAAAT	<4.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:20,14:34:218,0,255	0/1:16,8:24:110,0,255
+chr21	14765576	chr21:14765576:M	ACACACACACACACACACACACACACACACACACA	<14.5>,<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,2,27,0:30:255,255,255,89,48,0,255,255,89,255	2/3:0,3,18,11:34:255,255,255,255,255,255,255,255,0,255	1/2:0,15,7,0:24:255,126,57,255,0,225,255,127,255,255
+chr21	14768444	chr21:14768444:M	ACACACACACACACACACACACACA	<15.5>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,13,0:29:255,0,255,240,255,255	1/2:0,11,10:21:255,176,115,193,0,133	0/0:31,0,0:33:0,99,255,99,255,255
+chr21	14785448	chr21:14785448:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:1,31:33:255,79,0	0/1:18,25:44:255,0,209
+chr21	14788176	chr21:14788176:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,16:20:230,0,13	0/1:4,7:14:83,0,52	0/1:10,9:19:103,0,121
+chr21	14789973	chr21:14789973:M	TATATATATATATATATATATAAAAAATATATATA	<20.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,8,3:12:255,85,56,219,0,203	1/1:0,2,0:3:70,9,0,69,9,69	0/2:5,0,5:10:121,133,255,0,136,122
+chr21	14790818	chr21:14790818:M	TTTTTTTTCTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,21:22:255,64,0	0/1:9,18:29:255,0,81
+chr21	14795164	chr21:14795164:M	AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA	<12.7>,<14.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:5,16,0:21:255,0,92,255,139,255	1/1:0,7,0:9:247,27,0,221,21,211	0/2:7,0,5:12:118,139,255,0,193,175
+chr21	14797770	chr21:14797770:M	AAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:16:255,44,0	1/1:0,17:20:255,56,0	0/1:2,13:16:255,0,7
+chr21	14820939	chr21:14820939:M	AAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,3:4:96,12,0	0/1:5,2:9:43,0,132
+chr21	14825456	chr21:14825456:M	AAAAAAAAAATAAAAATAAAAGAAAAATAAACAAGAAAAAAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,17:18:255,50,0	0/1:10,14:24:183,0,111
+chr21	14836431	chr21:14836431:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,18:24:255,0,4	0/1:5,18:26:255,0,12	0/1:23,10:37:92,0,255
+chr21	14863039	chr21:14863039:M	AAAAAAAATAAAAATAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:11,17:28:226,0,117	0/1:24,15:39:166,0,255
+chr21	14871742	chr21:14871742:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,6:16:139,0,156	0/0:10,0:12:0,33,255	0/1:10,6:16:116,0,232
+chr21	14872982	chr21:14872982:M	AAAAAAAAAAAACAAGAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:11,12:23:143,0,125	0/0:26,1:28:0,62,255
+chr21	14883019	chr21:14883019:M	AAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,11,63	1/1:0,4:6:78,15,0	0/0:9,0:9:0,26,152
+chr21	14885045	chr21:14885045:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,15:19:255,56,0	1/1:0,9:9:239,27,0
+chr21	14892865	chr21:14892865:M	ATATATATATATATATA	<9>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,7:12:148,108,88,18,0,38	2/2:0,0,0:1:0,0,0,0,0,0	1/2:1,2,8:11:162,123,105,5,0,16
+chr21	14893828	chr21:14893828:M	GTGTGTGTGTGTATGTATGTGTGTGTGTGTGTGTGTG	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:22,0:22:0,66,255	0/1:19,12:33:251,0,255
+chr21	14897623	chr21:14897623:M	ATATATATATAT	<5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,23:38:255,0,178	1/1:0,48:48:255,142,0	0/0:48,0:48:0,142,255
+chr21	14899220	chr21:14899220:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,11:29:250,0,255	1/1:0,13:17:255,39,0	0/0:28,0:31:0,90,255
+chr21	14946845	chr21:14946845:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<10.8>,<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/3:0,0,7,4:11:255,245,225,78,77,46,136,117,0,105	1/2:0,8,8,0:16:255,145,100,124,0,100,255,124,145,255	1/3:1,16,0,5:22:255,119,86,255,93,255,255,0,255,255
+chr21	14948325	chr21:14948325:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,13,0:22:255,0,164,239,141,255	0/2:10,2,10:22:128,110,255,0,136,108	1/2:0,18,7:27:255,104,47,255,0,254
+chr21	14956663	chr21:14956663:M	AAAAAGAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:25:255,53,0	0/1:11,10:22:100,0,125	0/1:16,18:36:198,0,185
+chr21	14960673	chr21:14960673:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,16:38:196,0,255	0/1:17,16:36:198,0,205	0/0:31,2:35:0,65,255
+chr21	14961996	chr21:14961996:M	ATATATATATATATACATATTATATATATATATATATATATATATATAAAATATATA	<24.5>,<25.5>,<26.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,9,0:18:255,165,113,165,0,113,255,140,164,255	1/1:0,2,0,0:2:62,6,0,41,6,35,61,6,40,59	2/3:0,0,2,3:5:135,115,110,53,53,39,36,30,0,21
+chr21	14964173	chr21:14964173:M	CTTTTTTTTTTCTTTTT	<2.7>	.	.	Motif=CTTTTT	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,48:48:255,144,0	1/1:0,40:40:255,120,0
+chr21	14973679	chr21:14973679:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,16:25:223,0,94	1/1:1,13:20:187,8,0	0/1:12,14:29:183,0,145
+chr21	14973844	chr21:14973844:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13,0:14:219,23,0,222,41,247	0/1:2,8,0:10:108,0,5,114,34,166	1/2:1,6,5:13:197,70,54,72,0,83
+chr21	14975627	chr21:14975627:M	AAAAAAAAAAAAAAAAAA	<13>,<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,6,3:17:255,156,166,180,0,162,239,51,135,214	2/3:0,0,7,7:17:255,255,255,97,116,68,143,142,0,102	1/3:2,3,0,14:19:233,203,255,239,255,255,40,0,74,28
+chr21	14975659	chr21:14975659:M	GAGAGAGAGAGAGA	<5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:19,13:32:228,0,255	0/0:34,0:34:0,102,255	0/1:18,13:31:243,0,255
+chr21	14975670	chr21:14975670:M	AGAAAGAAAGAAAG	<2.5>	.	.	Motif=AGAA	GT:AD:DP:PL	0/0:14,2:16:0,18,165	0/1:5,3:8:18,0,44	0/0:29,1:30:0,71,255
+chr21	14981853	chr21:14981853:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,13,9,0:24:255,132,200,206,0,255,255,169,255,255	2/3:2,0,9,5:16:220,253,255,52,82,41,98,157,0,133	1/2:1,11,9,0:21:255,144,200,180,0,255,255,162,255,255
+chr21	14982699	chr21:14982699:M	TTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTTT	<21>,<32>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,25:26:255,255,255,66,75,0	1/2:0,12,10:24:255,174,247,255,0,255	2/2:0,0,23:25:255,255,255,73,75,0
+chr21	14983213	chr21:14983213:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:42:255,0,217	0/1:23,18:45:212,0,255	0/0:46,2:51:0,111,255
+chr21	14984368	chr21:14984368:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:13,11:24:120,0,156	0/0:36,0:37:0,108,255
+chr21	14988422	chr21:14988422:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGATAGATAATATAGATAGATAG	<16>,<16.5>,<17.5>,<18.5>	.	.	Motif=TAGA	GT:AD:DP:PL	2/3:2,1,4,6,0:13:54,62,166,39,97,76,28,32,0,56,89,155,96,91,241	3/4:0,0,0,4,7:15:205,236,255,230,255,255,121,128,127,88,44,75,66,0,36	1/2:0,3,7,0,0:10:95,51,42,29,0,3,119,68,33,174,124,72,33,197,255
+chr21	14988500	chr21:14988500:M	TGTGTGTGTGTGTGTGTGT	<10.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:5,21,0:32:195,34,0,255,95,255	1/2:4,23,11:42:255,255,221,175,0,255	0/0:26,0,0:29:0,47,208,85,255,255
+chr21	14988518	chr21:14988518:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:48,0:48:0,135,255	0/0:36,0:44:0,120,255	0/1:20,19:44:173,0,149
+chr21	14995758	chr21:14995758:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/0:18,0:19:0,56,255	0/1:16,13:30:156,0,215
+chr21	15002474	chr21:15002474:M	ACACACACACACACACGCACCCACGCACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,8:22:89,0,204	0/1:10,10:22:127,0,126	0/0:29,0:29:0,86,255
+chr21	15014828	chr21:15014828:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,19:38:255,0,212	0/1:20,17:38:187,0,247	0/1:21,18:39:211,0,255
+chr21	15019471	chr21:15019471:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:140,15,0	1/1:0,5:6:158,18,0	.
+chr21	15024568	chr21:15024568:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,13:32:255,0,255	0/1:10,12:23:255,0,220	0/0:22,0:25:0,74,255
+chr21	15029826	chr21:15029826:M	AAATAAATAAATAAATAAATAATAAA	<5.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:17,10:27:104,0,231	0/1:17,22:39:255,0,207
+chr21	15033225	chr21:15033225:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,2:8:119,35,33,105,0,143	0/2:2,0,8:10:107,134,224,0,29,5	0/1:13,12,0:26:136,0,156,196,182,255
+chr21	15035557	chr21:15035557:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,0:17:0,49,255	0/1:13,8:24:67,0,182	0/0:15,3:19:0,3,221
+chr21	15043812	chr21:15043812:M	TTGTTTTTTTGTTTGTTTGTTTTTTG	<5.5>	.	.	Motif=TTGT	GT:AD:DP:PL	0/1:16,15:31:195,0,216	0/1:24,19:44:215,0,255	0/0:35,0:35:0,103,255
+chr21	15051273	chr21:15051273:M	TGTGTGTGTGTGCGCGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:50,0:50:0,150,255	0/1:23,8:31:129,0,255	0/0:36,0:36:0,108,255
+chr21	15070306	chr21:15070306:M	ACACACACACACACACACACACACACACA	<11.5>,<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:18,1,27:46:255,255,255,0,255,255	0/1:17,22,0:39:255,0,255,255,255,255	1/2:0,17,19:37:255,255,243,255,0,207
+chr21	15072949	chr21:15072949:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,23:49:255,0,255	0/1:22,14:37:255,0,255	1/1:0,47:48:255,144,0
+chr21	15074088	chr21:15074088:M	TTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:22:215,0,203	0/1:9,6:20:140,0,218	1/1:0,16:17:255,51,0
+chr21	15084468	chr21:15084468:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,19,0:32:255,0,218,255,187,255	0/0:17,0,1:22:0,63,255,33,255,255	1/2:2,19,7:28:255,87,145,255,0,255
+chr21	15087274	chr21:15087274:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:10:126,0,37	0/0:5,0:5:0,15,136	0/1:7,7:22:175,0,146
+chr21	15087819	chr21:15087819:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,21:40:255,0,238	0/0:39,2:43:0,90,255	0/1:20,14:35:161,0,255
+chr21	15090170	chr21:15090170:M	TATATATATATATATATATAT	<11.5>,<12.5>,<13.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,25,0,0:44:255,0,217,255,255,255,255,255,255,255	1/2:1,11,9,0:21:255,139,97,145,0,144,255,133,202,255	0/3:15,0,0,6:21:122,163,255,108,255,255,0,255,255,255
+chr21	15098083	chr21:15098083:M	TTTTTGTTTTTTGTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:15,15:30:180,0,177	0/1:20,18:38:222,0,253
+chr21	15100303	chr21:15100303:M	CTACTACTACTACTACTACTACTACTACTAC	<8.3>	.	.	Motif=CTA	GT:AD:DP:PL	1/1:0,37:38:255,114,0	1/1:0,49:49:255,147,0	1/1:0,40:40:255,120,0
+chr21	15106989	chr21:15106989:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,10,8:22:255,255,255,154,160,101,173,190,0,132	1/2:0,6,6,0:14:255,157,166,153,0,140,255,119,163,255	1/3:0,5,0,7:12:255,188,173,253,118,238,135,0,138,118
+chr21	15108169	chr21:15108169:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,21:23:255,67,0	0/1:8,10:20:126,0,82	0/1:11,16:28:202,0,122
+chr21	15115128	chr21:15115128:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:33:0,81,255	0/1:20,24:45:255,0,204	0/1:25,28:53:255,0,255
+chr21	15115145	chr21:15115145:M	TGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,30:30:255,88,0	0/1:23,19:42:188,0,253	0/1:29,22:51:219,0,255
+chr21	15116601	chr21:15116601:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:24:255,52,0	0/1:18,13:33:149,0,218	1/1:0,34:36:255,105,0
+chr21	15118986	chr21:15118986:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:82,10,0	0/1:4,3:7:29,0,46	0/0:5,0:5:0,15,85
+chr21	15120250	chr21:15120250:M	ATCTATCTATCTATCTGTCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATC	<19.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/0:21,0:24:0,63,255	0/1:8,5:14:98,0,195
+chr21	15128288	chr21:15128288:M	ACACACACACACACACACATACACACAAACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	0/1:15,20:35:255,0,167	1/1:0,30:30:255,89,0
+chr21	15136635	chr21:15136635:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:37:255,109,0	0/1:21,17:38:191,0,255	0/1:22,11:35:110,0,255
+chr21	15137363	chr21:15137363:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,10:14:133,0,23	0/1:14,9:25:100,0,161	1/1:1,11:19:166,10,0
+chr21	15138122	chr21:15138122:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,1,16:18:255,255,255,48,32,0	1/2:0,20,10:30:255,171,85,255,0,255	2/2:0,2,23:25:255,255,255,69,38,0
+chr21	15146923	chr21:15146923:M	AAAAAAAAAAAAAAACAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:19:255,53,0	0/1:17,5:27:22,0,249	0/1:10,9:20:101,0,130
+chr21	15149898	chr21:15149898:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,34:35:255,85,0	0/1:18,17:35:196,0,213	0/1:20,18:39:220,0,248
+chr21	15155800	chr21:15155800:M	CACACACACACACACACACACACACACACACACACACACAC	<19.5>,<21.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,8,7:15:255,255,255,189,190,162,138,209,0,188	1/3:2,10,0,3:16:191,49,45,223,75,255,143,0,255,255	0/2:4,0,14,0:18:188,238,255,0,58,16,238,255,70,255
+chr21	15170061	chr21:15170061:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,8:13:240,111,96,83,0,46	0/2:3,0,2:6:15,27,112,0,57,42	0/2:2,0,3:9:29,39,109,0,49,36
+chr21	15175812	chr21:15175812:M	AAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:7:92,32,30,25,0,42	0/2:6,1,2:9:30,18,89,0,82,142	0/2:2,0,2:4:43,32,54,0,32,43
+chr21	15176666	chr21:15176666:M	CTCTCTCTCTCT	<14.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,17:24:255,64,0	0/1:13,12:33:246,0,255	0/1:11,10:25:204,0,243
+chr21	15176677	chr21:15176677:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,11:34:175,0,255	0/0:29,1:36:0,66,255	0/0:21,1:24:0,41,255
+chr21	15177805	chr21:15177805:M	AATTAATTAATTAATT	<3.2>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,10:10:255,30,0	0/1:16,6:23:103,0,255	0/0:14,1:16:0,10,255
+chr21	15177819	chr21:15177819:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:25:255,52,0	0/1:13,13:28:255,0,255	0/1:13,11:26:236,0,255
+chr21	15192747	chr21:15192747:M	TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTT	<9.6>	.	.	Motif=TTTAA	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:0,11:11:199,32,0	0/1:5,8:13:111,0,55
+chr21	15195361	chr21:15195361:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:78,9,0	0/1:3,3:6:59,0,62	0/1:4,2:10:25,0,109
+chr21	15213460	chr21:15213460:M	AAAAAAAAAAAAAAGAGAAAAGAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/0:14,0:14:0,41,243	0/1:9,11:21:145,0,100
+chr21	15219706	chr21:15219706:M	AAAAAAAAAAAAAAACACAAAAAACAAAAAAAACAAAAACAAACAAACAAAAAA	<56>,<57>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,3:11:246,51,22,124,0,105	2/2:0,1,11:12:255,204,171,36,18,0	0/1:5,8,0:15:173,0,100,141,130,255
+chr21	15220733	chr21:15220733:M	TGTGCGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<21>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,5,3:21:255,94,38,128,0,104,187,15,124,255	2/3:0,1,7,9:18:255,255,250,120,107,71,88,57,0,47	0/1:20,8,0,0:30:16,0,187,82,255,255,104,255,255,255
+chr21	15220770	chr21:15220770:M	GAGAGAGAGAGAGAGAGAGA	<11>,<12>	.	.	Motif=GA	GT:AD:DP:PL	1/2:1,22,17:40:255,217,120,229,0,200	2/2:0,4,20:24:255,255,213,60,14,0	0/1:18,12,1:31:86,0,157,119,229,255
+chr21	15228415	chr21:15228415:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,8:19:70,0,117	0/0:21,1:22:0,48,255	0/1:6,12:18:133,0,41
+chr21	15229863	chr21:15229863:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/0:46,1:47:0,120,255	0/1:19,19:38:242,0,242
+chr21	15229909	chr21:15229909:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,54,0	1/1:0,17:21:255,57,0	1/1:1,24:27:255,49,0
+chr21	15232493	chr21:15232493:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,52:52:255,154,0	1/1:0,52:52:255,153,0	1/1:1,47:48:255,123,0
+chr21	15237230	chr21:15237230:M	TTTTTTTTTTTTTTTGTTTTGTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:14:225,31,0	1/1:1,9:11:148,15,0	0/1:3,10:14:136,0,20
+chr21	15239758	chr21:15239758:M	TATATATATATATATATATATATATATATATATATATATAT	<11.5>,<17.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:13:255,255,255,38,38,0	2/2:0,0,0:1:12,13,14,3,3,0	1/2:0,10,3:14:255,80,47,255,0,255
+chr21	15244443	chr21:15244443:M	AAAAAAAAAAAAAGAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,36:37:255,91,0	0/1:8,24:32:255,0,51
+chr21	15247964	chr21:15247964:M	ATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:1,3:7:0,3,15	0/0:0,1:2:0,0,4	0/1:0,2:3:1,0,2
+chr21	15249320	chr21:15249320:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,39:41:255,84,0	1/1:3,36:40:255,65,0	0/1:23,21:44:253,0,255
+chr21	15255821	chr21:15255821:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,1,4:12:52,25,142,0,52,57	1/2:0,3,5:8:142,68,59,49,0,26	0/0:14,0,0:14:0,42,255,41,255,239
+chr21	15269928	chr21:15269928:M	TTCTTCTTCTTCTCCTCCTTCTCCTCCTCCTCCTCCTTCTTCTCCTTCTTCTTCTTCTT	<20.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:8,9:17:106,0,89	0/0:14,0:14:0,41,231	0/1:5,5:11:62,0,53
+chr21	15272024	chr21:15272024:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<8.7>,<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,23,0:25:255,75,0,255,75,255	1/1:0,27,0:27:255,81,0,255,81,255	1/2:0,15,9:24:255,242,200,255,0,255
+chr21	15284786	chr21:15284786:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,23:23:255,69,0	0/1:16,16:32:255,0,255
+chr21	15296442	chr21:15296442:M	ATATATATATATATATATATATATATATATATATATATA	<9.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,13,1,17:39:255,255,255,255,209,255,255,0,255,255	1/1:0,30,0,0:37:255,110,0,255,108,255,255,110,255,255	2/3:1,0,3,4:10:188,191,218,43,70,45,11,38,0,11
+chr21	15297475	chr21:15297475:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<23>,<26>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,8,4,0:12:255,67,106,244,0,233,255,130,245,255	1/1:0,21,0,0:22:255,66,0,255,66,255,255,66,255,255	2/3:0,0,5,4:9:170,187,255,104,108,93,83,153,0,141
+chr21	15297578	chr21:15297578:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:40:255,0,241	1/1:1,39:40:255,100,0	0/0:32,1:33:0,79,255
+chr21	15298922	chr21:15298922:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATTAAATAAAT	<12.2>,<13.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,9,5:14:255,83,56,173,0,133	1/1:0,9,0:9:255,27,0,188,26,163	2/2:0,0,12:12:226,226,226,35,35,0
+chr21	15299858	chr21:15299858:M	CACACACACACACACACACACACACACACACATACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	0/2:11,0,9:20:197,152,255,0,185,251	0/0:19,0,0:19:0,55,255,57,255,255	1/2:0,6,14:20:255,233,178,85,0,43
+chr21	15304739	chr21:15304739:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:242,0,255	1/1:0,41:41:255,120,0	0/0:51,1:53:0,137,255
+chr21	15314370	chr21:15314370:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,11:17:255,255,255,35,0,52	2/2:0,0,11:14:255,255,255,41,41,0	1/1:1,4,0:7:64,1,0,79,18,148
+chr21	15314986	chr21:15314986:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:34:255,0,157	1/1:1,22:24:255,53,0	0/0:36,1:37:0,91,255
+chr21	15316699	chr21:15316699:M	TTTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,9:23:194,0,255	1/1:0,31:37:255,109,0	0/0:23,0:25:0,75,255
+chr21	15318711	chr21:15318711:M	TTTTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTT	<9>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:8,3:11:20,0,107	0/0:8,0:8:0,23,139	0/0:5,1:7:0,2,76
+chr21	15323545	chr21:15323545:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:21:29,0,212	0/0:26,3:32:0,31,255	1/1:3,24:30:255,13,0
+chr21	15339623	chr21:15339623:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:40,0,57	0/0:8,1:11:0,4,111	0/1:4,2:8:30,0,43
+chr21	15345747	chr21:15345747:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:219,0,255	0/0:37,1:40:0,99,255	0/1:14,18:33:232,0,169
+chr21	15350679	chr21:15350679:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,23:46:255,0,239	1/1:0,31:33:255,96,0	0/0:30,1:31:0,73,255
+chr21	15399504	chr21:15399504:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<14.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:12,16:29:255,0,195	0/0:21,0:24:0,68,255	0/1:13,12:26:201,0,232
+chr21	15403890	chr21:15403890:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:15:0,27,229	0/1:7,7:16:81,0,82	0/1:12,5:17:36,0,156
+chr21	15412255	chr21:15412255:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,11:25:255,0,255	0/0:37,0:38:0,114,255	0/1:7,12:21:255,0,129
+chr21	15421121	chr21:15421121:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:19:90,0,137	0/0:18,0:19:0,53,255	0/1:14,4:19:16,0,205
+chr21	15435488	chr21:15435488:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	0/1:1,3:5:43,0,2	0/1:1,1:2:10,0,10
+chr21	15445742	chr21:15445742:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,22:51:255,0,255	0/0:49,3:52:0,101,255	1/1:1,32:35:255,85,0
+chr21	15470779	chr21:15470779:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,10:22:170,0,187	0/1:14,7:25:114,0,255	0/0:16,0:18:0,49,255
+chr21	15470817	chr21:15470817:M	AGAGAGAGAGAGAGAGAGAGA	<11.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:14,15:31:139,0,106	0/1:16,8:26:50,0,142	0/0:29,0:32:0,90,255
+chr21	15471646	chr21:15471646:M	ACACACACACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,12:26:252,0,255	0/1:12,5:19:79,0,255	0/0:17,0:19:0,56,255
+chr21	15474415	chr21:15474415:M	AATAAAATAAAATAAAA	<2.8>	.	.	Motif=AATAA	GT:AD:DP:PL	0/1:18,16:34:255,0,255	0/1:14,17:31:255,0,255	0/0:43,0:43:0,129,255
+chr21	15495553	chr21:15495553:M	TTTTTTTGTTGTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,11:34:102,0,255	0/1:26,8:35:45,0,255	0/0:40,3:43:0,73,255
+chr21	15518170	chr21:15518170:M	ATATATATATATATATATATATATATATATA	<14.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,6:13:185,101,136,118,0,169	.	0/0:2,0,0:3:0,6,34,5,33,32
+chr21	15519444	chr21:15519444:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGT	<22>,<25>,<28>	.	.	Motif=TG	GT:AD:DP:PL	3/3:0,0,0,5:5:86,100,150,100,150,150,15,15,15,0	1/3:1,10,0,2:14:255,16,31,255,63,255,255,0,255,255	2/3:1,0,3,4:9:122,137,203,50,114,102,71,89,0,75
+chr21	15520130	chr21:15520130:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:21:0,60,255	0/1:10,5:16:85,0,230	0/0:19,0:20:0,57,255
+chr21	15526728	chr21:15526728:M	AAAAAAAAGAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:33:255,0,255	1/1:0,31:36:255,98,0	0/0:37,0:37:0,111,255
+chr21	15534095	chr21:15534095:M	ATATATATATATATATATATA	<11.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:17,1,11:29:241,188,255,0,255,255	1/2:0,11,7:19:255,132,80,165,0,141	0/0:36,0,0:36:0,106,255,108,255,255
+chr21	15540648	chr21:15540648:M	TTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTATTT	<9.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:6,17:32:60,7,0	1/1:0,16:19:88,29,0	0/0:10,2:34:0,14,65
+chr21	15552166	chr21:15552166:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:34:122,0,255	1/1:0,30:36:255,105,0	0/0:59,0:61:0,182,255
+chr21	15566192	chr21:15566192:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19>,<23>,<24>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,6,0:20:255,159,118,229,0,255,255,105,255,255	1/3:0,5,0,5:10:204,134,119,167,83,205,84,0,135,120	0/2:8,1,10,0:20:244,253,255,0,120,195,179,255,227,255
+chr21	15570044	chr21:15570044:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,1,6:21:46,88,255,0,194,202	0/2:13,0,6:20:54,109,255,0,185,164	1/2:3,8,3:15:116,7,48,103,0,212
+chr21	15572708	chr21:15572708:M	TATATATATATATATATATATATATATAT	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:13,1:17:0,25,211	0/0:2,0:2:0,6,33	1/1:0,7:7:120,20,0
+chr21	15575687	chr21:15575687:M	TTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,39:40:255,120,0	1/1:0,36:40:255,119,0
+chr21	15597540	chr21:15597540:M	GTGTGTCTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTATGTG	<12.2>	.	.	Motif=GTGT	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,25:25:255,75,0	1/1:1,26:28:255,49,0
+chr21	15601839	chr21:15601839:M	TCTCTCTCTCTCAATCTCTCTCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<28>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,12:13:255,39,0	1/1:0,14:14:255,42,0	1/1:0,21:23:255,68,0
+chr21	15601899	chr21:15601899:M	GTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<26>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,5,2:7:150,30,32,120,0,110	0/0:5,0,1:6:0,18,157,2,77,60	1/2:0,4,10:15:236,149,219,108,0,76
+chr21	15606237	chr21:15606237:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,103,0	0/1:12,10:22:112,0,146	1/1:1,34:35:255,85,0
+chr21	15606728	chr21:15606728:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/1:16,18:35:216,0,190	0/0:38,1:40:0,99,255
+chr21	15610775	chr21:15610775:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,1:8:0,6,102	0/1:5,4:10:45,0,52	0/0:11,0:12:0,35,193
+chr21	15625607	chr21:15625607:M	CACACACACACACACACACACACGCACACACACACACACA	<19>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/2:3,16,16:35:255,250,255,252,0,255	0/1:7,20,0:29:255,0,39,255,105,255	1/2:1,15,8:24:255,131,199,255,0,255
+chr21	15628454	chr21:15628454:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,13:27:255,0,180	0/1:4,14:20:255,0,34	0/1:12,10:25:189,0,220
+chr21	15628492	chr21:15628492:M	AGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGACAGAGAGAGAGA	<26.5>,<27.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:10,6,3:20:60,0,92,27,105,250	0/2:7,2,11:20:215,121,159,0,68,118	0/2:12,3,5:20:73,32,138,0,126,247
+chr21	15628596	chr21:15628596:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,51:52:255,135,0	0/1:22,25:47:255,0,255	1/1:0,48:48:255,142,0
+chr21	15629254	chr21:15629254:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,18,8,0:31:255,234,174,255,0,255,255,230,255,255	0/2:2,0,14,1:17:255,255,255,0,65,23,255,255,17,255	1/3:0,18,0,13:32:255,229,255,255,255,255,255,0,255,255
+chr21	15629909	chr21:15629909:M	AAAAAAAAAACAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:44:255,129,0	0/1:16,18:35:227,0,182	1/1:1,32:35:255,84,0
+chr21	15632312	chr21:15632312:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,21:43:255,0,255	0/1:21,26:48:255,0,245	0/1:35,28:63:255,0,255
+chr21	15636907	chr21:15636907:M	ATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:19,14:37:255,0,255	0/1:21,10:31:227,0,255	0/1:18,11:31:255,0,255
+chr21	15645363	chr21:15645363:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:16,15:33:255,0,255	1/1:0,37:38:255,114,0
+chr21	15648427	chr21:15648427:M	AAGAAAGAAAGA	<3.8>	.	.	Motif=AAGA	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:24,18:42:255,0,255	1/1:0,35:35:255,105,0
+chr21	15659543	chr21:15659543:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,6:16:57,0,120	0/1:15,6:23:34,0,201	0/1:12,5:17:35,0,155
+chr21	15664869	chr21:15664869:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,14:18:240,25,0	0/1:8,9:22:113,0,95	1/1:3,19:24:255,17,0
+chr21	15667565	chr21:15667565:M	ACACTACACACACACACACACACACACACACACAAATACACACACACA	<22>,<23>,<25>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,8,0:21:255,128,89,243,0,183,255,149,244,255	1/3:0,15,0,11:26:255,194,255,255,255,255,255,0,255,255	2/2:0,0,18,0:18:255,255,255,53,53,0,255,255,54,255
+chr21	15669218	chr21:15669218:M	AAAAAAAAAAAAAACAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:6,10:17:123,0,63	1/1:0,29:29:255,85,0
+chr21	15672189	chr21:15672189:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,10:15:192,7,0	1/1:0,16:18:255,52,0	1/1:1,13:16:241,29,0
+chr21	15678835	chr21:15678835:M	ACACACACACACACACACACACACACACACACACACA	<20.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,12,0:30:255,208,124,255,0,224,255,178,255,255	0/1:17,6,0,0:23:104,0,255,99,255,255,155,255,255,255	2/3:0,0,6,11:17:255,255,255,190,188,141,104,87,0,54
+chr21	15679780	chr21:15679780:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,92	0/0:9,0:9:0,26,150	0/0:10,1:11:0,15,154
+chr21	15704677	chr21:15704677:M	ACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	0/0:28,0:31:0,91,255	0/1:18,10:28:97,0,239	0/0:44,0:44:0,130,255
+chr21	15706489	chr21:15706489:M	ATATATATATATATGTGTGTGTATATATATATATATATATA	<24.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,11:21:255,63,0	0/0:12,0:14:0,14,255	1/1:0,11:16:255,48,0
+chr21	15706529	chr21:15706529:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<12.5>,<16.5>,<17.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,0,9,8:19:255,255,255,73,97,40,123,128,0,73	1/2:0,9,4,1:16:255,84,86,255,0,250,255,34,252,255	2/2:0,0,17,1:22:255,255,255,62,66,0,255,255,48,224
+chr21	15708937	chr21:15708937:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<26>,<27>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,3,0:7:164,170,180,21,21,0,109,110,17,92	1/2:0,5,2,0:10:213,57,65,146,0,149,188,30,146,180	2/3:0,0,1,3:10:138,151,212,39,63,34,74,78,0,55
+chr21	15712760	chr21:15712760:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:58,6,0	0/0:1,0:3:0,7,44	1/1:0,3:7:105,14,0
+chr21	15714379	chr21:15714379:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,5,10,0:16:209,163,250,74,0,107,254,255,143,255	1/3:0,9,0,9:19:255,246,217,255,247,255,163,0,255,240	2/2:0,0,20,0:20:255,255,255,59,60,0,255,255,60,255
+chr21	15730977	chr21:15730977:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3,1:6:34,0,27,34,12,87	1/1:0,4,0:6:76,14,0,87,14,122	0/2:3,0,5:8:61,84,184,0,42,27
+chr21	15750215	chr21:15750215:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,3:6:25,28,49,0,12,1	0/1:1,3,1:6:54,0,15,25,6,28	1/2:0,1,3:5:48,28,25,12,0,1
+chr21	15775740	chr21:15775740:M	CCCCCCCCCCCCCCCGCCCCC	<20>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,1:2:16,3,0	1/1:0,1:1:15,3,0	1/1:0,3:3:47,9,0
+chr21	15790651	chr21:15790651:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,2:24:0,34,255	0/0:19,1:22:0,47,255	0/1:6,9:17:118,0,67
+chr21	15806426	chr21:15806426:M	TTTCTTTTTTTTTTTTCTTTCTTTTCT	<5.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:1,34:35:255,84,0	1/1:0,28:28:255,83,0	1/1:0,44:44:255,130,0
+chr21	15827753	chr21:15827753:M	TGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<28.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:5,6:12:146,0,127	0/1:4,4:9:99,0,93	0/1:1,8:11:215,0,1
+chr21	15846123	chr21:15846123:M	TATATATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,4:11:49,0,10	0/0:1,0:1:0,3,13	0/1:1,0:5:1,0,8
+chr21	15860954	chr21:15860954:M	ATATATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,13,0:28:124,0,94,207,175,255	0/1:13,8,0:23:66,0,105,135,170,255	1/2:1,12,12:26:255,255,255,143,0,255
+chr21	15860976	chr21:15860976:M	AGAGAGAGAGAGAGAGAGAG	<13>,<14>	.	.	Motif=AG	GT:AD:DP:PL	0/1:9,12,0:23:255,0,191,177,231,255	0/2:9,1,12:22:255,143,255,0,218,195	0/1:19,13,0:38:255,0,255,222,255,255
+chr21	15862572	chr21:15862572:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/1:5,10:16:126,0,49	0/0:20,0:21:0,61,255
+chr21	15862749	chr21:15862749:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,31:51:255,0,204	0/0:47,0:48:0,140,255	0/1:19,30:50:255,0,209
+chr21	15864159	chr21:15864159:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:24:0,49,255	0/1:11,10:21:109,0,127	0/0:23,0:28:0,81,255
+chr21	15884470	chr21:15884470:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,1:17:0,31,255	0/1:8,4:12:33,0,101	0/0:12,2:15:0,8,183
+chr21	15891364	chr21:15891364:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,6,4:11:231,59,38,115,0,87	2/2:1,0,15:16:236,239,255,30,47,0	1/1:0,8,0:13:234,13,0,160,25,150
+chr21	15891808	chr21:15891808:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,18:36:225,0,225	0/1:15,8:24:70,0,199	0/1:16,17:36:201,0,211
+chr21	15895048	chr21:15895048:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,42:45:255,111,0	1/1:1,45:46:255,117,0
+chr21	15903621	chr21:15903621:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,6:7:170,21,0
+chr21	15905522	chr21:15905522:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,5:30:13,0,255	0/1:11,13:27:173,0,109	0/0:28,2:32:0,58,255
+chr21	15907947	chr21:15907947:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:4:23,0,23	1/1:0,5:5:83,15,0	0/0:8,0:8:0,23,136
+chr21	15956506	chr21:15956506:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,2:37:0,71,255	0/0:21,1:23:0,49,255	0/1:24,22:47:255,0,255
+chr21	15959355	chr21:15959355:M	ACACACACACACACACACACACACACGCACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,12:18:89,0,18	1/1:0,4:5:55,13,0	0/1:7,3:10:7,0,52
+chr21	15959397	chr21:15959397:M	ATATATATATATATATATATATATATATATATAT	<18>,<21>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,4:8:136,98,86,47,0,86	.	2/2:0,0,1:1:28,28,28,3,3,0
+chr21	15963134	chr21:15963134:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:32,0,120	0/0:11,1:13:0,21,177	0/1:11,4:18:20,0,158
+chr21	15971170	chr21:15971170:M	TATCTATCTATCTAATGTATCTTATCTATCTATCTATCTATCTATCTATCTATCTATGTATCTA	<18>,<19>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,3,3:6:163,57,40,57,0,40	1/2:0,8,8:16:255,144,98,143,0,98	1/1:0,8,0:10:238,25,0,156,7,129
+chr21	15974836	chr21:15974836:M	AAATAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<7.8>,<12.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/3:0,0,13,11:24:255,255,255,208,209,140,211,246,0,178	2/2:0,0,11,0:11:198,229,255,32,33,0,198,229,32,198	1/3:0,11,0,10:21:255,255,243,255,184,255,255,0,255,255
+chr21	15985762	chr21:15985762:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,11:15:255,195,157,44,0,8	0/2:4,3,9:18:229,123,143,0,23,67	1/2:1,12,7:20:255,100,60,152,0,157
+chr21	15987744	chr21:15987744:M	TATTTTGTTTTTTTAATTTTGTTTTATATTATTTTATTTTATTTT	<9.4>,<9.6>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:0,21,0:21:255,63,0,255,63,255	1/1:0,22,0:22:255,66,0,255,66,255	1/2:0,17,20:37:255,255,255,255,0,255
+chr21	15988227	chr21:15988227:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:2,39:41:255,85,0	0/1:22,16:38:188,0,255
+chr21	15993247	chr21:15993247:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,12:13:255,255,228,39,38,0	2/2:0,0,9:9:255,178,154,27,26,0	1/2:1,5,5:11:179,69,56,56,0,67
+chr21	16003384	chr21:16003384:M	AAAAAAGAAAAAAGAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,37:37:255,109,0	1/1:0,38:38:255,112,0
+chr21	16004974	chr21:16004974:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:28,0,9	0/0:2,0:2:0,6,34	0/1:1,4:5:57,0,3
+chr21	16008278	chr21:16008278:M	ACACACACACACACACACACACACACACA	<19.5>,<21.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,16,0:17:255,255,255,51,48,0,255,255,51,255	2/3:0,0,7,3:11:255,255,255,78,75,52,196,182,0,183	1/2:0,10,5,0:17:255,135,99,255,0,246,255,132,255,255
+chr21	16011788	chr21:16011788:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<10>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,34,0:36:255,108,0,255,108,255	1/1:0,33,0:35:255,105,0,255,105,255	1/2:0,14,9:24:255,238,196,255,0,255
+chr21	16012632	chr21:16012632:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,65,0	1/1:0,9:10:247,27,0	1/1:0,19:22:255,60,0
+chr21	16033977	chr21:16033977:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/0:29,1:33:0,76,255	0/1:9,12:25:159,0,109
+chr21	16036689	chr21:16036689:M	TTATTTATTTATTTATTTATTT	<6.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:34,0:34:0,100,255	0/1:9,14:23:195,0,102
+chr21	16052752	chr21:16052752:M	TTTTTTTTTCTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,18:36:227,0,227	0/1:21,13:34:128,0,255	0/0:34,0:34:0,100,255
+chr21	16057473	chr21:16057473:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:136,0,255	0/0:31,0:32:0,94,255	0/1:17,17:35:220,0,211
+chr21	16063690	chr21:16063690:M	ATCTATCCATCTATTACCTATCTATCTATCTATCTATCTATCTATATATCTATCTAT	<15.2>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:13,10:23:124,0,182	0/1:7,12:19:161,0,70	0/0:17,0:17:0,50,255
+chr21	16066252	chr21:16066252:M	TCTTTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTT	<10.8>,<11.5>,<13.5>	.	.	Motif=TCTT	GT:AD:DP:PL	1/3:0,3,0,3:12:160,114,105,136,96,142,46,0,63,73	2/3:0,0,4,0:7:93,85,79,18,17,5,73,65,0,70	2/3:0,2,4,6:20:195,162,155,96,75,93,50,17,0,72
+chr21	16071570	chr21:16071570:M	CCCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,4:7:135,9,0	.	1/1:0,2:3:76,9,0
+chr21	16091623	chr21:16091623:M	ATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,21:21:255,63,0	0/1:14,9:23:209,0,255	1/1:0,22:22:255,66,0
+chr21	16095631	chr21:16095631:M	AGATAGATAGCAGTAAGATAGGTAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<17.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/1:0,13:14:252,41,0	0/1:4,4:9:54,0,45	0/1:8,4:12:38,0,111
+chr21	16095995	chr21:16095995:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:255,44,0	1/1:2,21:23:255,33,0	1/1:1,22:23:255,50,0
+chr21	16097598	chr21:16097598:M	TGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,0:33:0,88,255	0/0:26,2:29:0,47,255	0/1:15,20:36:255,0,170
+chr21	16105071	chr21:16105071:M	TTTTTTTTGGTTTTGTTTTTGTTTTTTTTGTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/1:8,12:20:158,0,86	0/0:17,0:17:0,50,255
+chr21	16114233	chr21:16114233:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/0:23,1:26:0,56,255	0/1:16,8:26:67,0,229
+chr21	16116725	chr21:16116725:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,109,0	0/1:13,18:31:232,0,141	1/1:0,50:50:255,148,0
+chr21	16154947	chr21:16154947:M	AAATAAATAAATAAATAATAAATAAATAAATAAATAAATAAA	<33.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:9,3:12:6,0,229	0/0:7,0:8:0,21,206	0/0:10,1:11:0,19,255
+chr21	16157677	chr21:16157677:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:24:255,0,135	0/1:11,8:21:180,0,242	0/1:10,15:27:255,0,201
+chr21	16164271	chr21:16164271:M	TTTTCTCTTCTTTTCTTTTCTTTTCTTTTTTTTTTTT	<7.6>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:9,4:14:12,0,85	0/1:4,3:8:18,0,31	0/1:11,8:20:55,0,84
+chr21	16167144	chr21:16167144:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<21>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,12:25:255,213,255,255,0,255	1/2:0,14,12:26:255,204,255,255,0,255	1/2:0,14,12:30:255,233,255,255,0,255
+chr21	16171591	chr21:16171591:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,1:3:78,17,9,35,0,26	1/2:0,2,4:8:183,67,44,53,0,34	1/2:0,4,2:9:208,35,9,97,0,78
+chr21	16178919	chr21:16178919:M	AAAAAAAAAAAGAAAAGAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:0,38:39:255,114,0	1/1:2,37:39:255,79,0
+chr21	16182568	chr21:16182568:M	TCTCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:4,14:19:220,0,23	1/1:1,15:16:255,29,0	1/1:1,6:7:99,2,0
+chr21	16187807	chr21:16187807:M	TCCTTCCTTCCTCCTTTCCTTCTTTCCTTTCTTTCTTTCTTGCTTCCTTCCTTCCCTCCTTCCTTC	<5>,<8.2>,<18.5>	.	.	Motif=TCCT	GT:AD:DP:PL	2/3:0,1,3,10:15:255,255,255,234,222,239,75,49,0,45	1/3:0,3,0,7:10:232,163,166,240,175,252,77,0,77,56	2/3:0,1,6,5:13:255,242,246,117,98,106,151,125,0,136
+chr21	16189426	chr21:16189426:M	TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,60,0	1/1:0,29:31:255,90,0	1/1:0,24:25:255,73,0
+chr21	16192978	chr21:16192978:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,28:31:255,36,0	1/1:1,28:29:255,68,0	1/1:1,37:38:255,94,0
+chr21	16193863	chr21:16193863:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,14:29:255,243,172,208,0,173	1/1:3,15,1:19:218,4,0,201,38,255	1/2:0,6,14:20:255,243,189,90,0,48
+chr21	16193922	chr21:16193922:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,9,11:22:255,222,163,137,0,98	1/1:1,20,1:22:255,47,0,255,47,255	1/2:4,19,8:32:255,63,52,200,0,255
+chr21	16197311	chr21:16197311:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,8:25:144,0,255	1/1:0,22:27:255,45,0	0/0:35,0:37:0,111,255
+chr21	16205191	chr21:16205191:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:36:200,0,255	1/1:1,48:49:255,126,0	0/0:49,1:50:0,129,255
+chr21	16207977	chr21:16207977:M	ACACATACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,23:41:255,0,255	1/1:1,20:23:255,39,0	0/0:43,0:44:0,132,255
+chr21	16213875	chr21:16213875:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,26:42:255,0,183	1/1:0,48:48:255,141,0	0/0:32,2:34:0,63,255
+chr21	16218220	chr21:16218220:M	TATATATATATATAACATATATATATCTATATATATATATAGATATATATA	<26.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:9,1:10:0,11,146	1/1:0,2:2:35,6,0	0/1:6,3:9:28,0,80
+chr21	16220076	chr21:16220076:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,8:25:153,0,255	0/0:25,0:25:0,75,255	0/1:9,12:22:255,0,172
+chr21	16220124	chr21:16220124:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:23:162,0,215	0/0:9,0:11:0,27,228	0/1:5,3:11:53,0,105
+chr21	16226937	chr21:16226937:M	AAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:5:56,0,17	1/1:0,2:4:57,6,0	1/1:0,4:5:112,12,0
+chr21	16237993	chr21:16237993:M	TATATATATATATACACATATATATGAGAATATATATCTATATCTATATATATATAT	<30.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:20,0:20:0,58,255	0/0:15,0:15:0,44,248	0/1:9,7:20:96,0,98
+chr21	16238049	chr21:16238049:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,15:29:66,0,53	1/1:5,17:22:109,10,0	0/1:17,12:32:30,0,101
+chr21	16238083	chr21:16238083:M	TATATATATATA	<5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,9:30:19,0,127	0/0:21,1:22:0,47,205	0/0:20,5:29:0,11,161
+chr21	16239526	chr21:16239526:M	TTTTTCTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:16:47,0,105	1/1:1,6:8:88,8,0	0/1:11,7:21:52,0,124
+chr21	16247684	chr21:16247684:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,9,9:21:255,108,104,85,0,136	1/1:0,19,0:21:255,48,0,255,48,255	1/2:0,12,13:26:255,235,165,181,0,139
+chr21	16248034	chr21:16248034:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT	<13.8>	.	.	Motif=TATG	GT:AD:DP:PL	1/1:0,17:18:255,53,0	1/1:0,19:22:255,65,0	1/1:0,16:20:255,59,0
+chr21	16249011	chr21:16249011:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,27:30:255,51,0	1/1:1,26:29:255,67,0	1/1:0,27:27:255,79,0
+chr21	16249737	chr21:16249737:M	TTTTTTTCTTTTTTCTTTTTTTTTTTCTTTTCTTTTTTTTTTTTTT	<49>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:174,12,0	1/1:0,5:5:140,15,0	1/1:0,3:4:98,12,0
+chr21	16251228	chr21:16251228:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:24,19:44:255,0,255	0/0:31,0:31:0,93,255	0/1:28,24:53:255,0,255
+chr21	16254112	chr21:16254112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:34:255,81,0	1/1:1,37:38:255,94,0	1/1:0,29:30:255,88,0
+chr21	16260029	chr21:16260029:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,22:38:255,0,195	1/1:1,38:41:255,85,0	0/1:33,21:54:242,0,255
+chr21	16261362	chr21:16261362:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,31:45:255,0,226	1/1:0,32:33:255,99,0	0/1:19,18:38:255,0,255
+chr21	16265716	chr21:16265716:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,5:11:178,70,57,57,0,68	0/1:3,9,1:13:127,0,13,111,34,183	1/2:1,5,5:11:174,68,55,56,0,66
+chr21	16273115	chr21:16273115:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:16:0,24,206	0/1:5,3:9:26,0,56	0/1:4,2:8:10,0,64
+chr21	16273814	chr21:16273814:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,17:19:255,255,255,55,20,0	1/2:1,12,8:23:255,98,81,203,0,161	2/2:2,1,23:26:255,255,255,41,58,0
+chr21	16274638	chr21:16274638:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,15:31:255,255,192,232,0,184	2/2:1,3,26:31:255,255,255,55,27,0	1/2:1,24,17:43:255,255,181,255,0,255
+chr21	16284659	chr21:16284659:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<15.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,24,0:30:255,255,255,89,86,0,255,255,89,255	1/2:0,12,11,0:30:255,255,255,255,0,234,255,255,255,255	2/3:0,0,7,4:12:245,240,255,66,121,100,191,174,0,177
+chr21	16286560	chr21:16286560:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:1,36:37:255,91,0	0/1:17,25:42:255,0,194
+chr21	16296053	chr21:16296053:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,1:9:0,6,63	1/1:1,8:13:109,21,0	0/0:2,0:4:0,10,37
+chr21	16314013	chr21:16314013:M	TATATATATATATATATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,3:4:32,8,0	.	1/1:0,1:1:11,3,0
+chr21	16318998	chr21:16318998:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	0/1:8,2:11:4,0,102	0/1:6,4:10:38,0,72
+chr21	16324595	chr21:16324595:M	TATATATATATATAACATAGACATATAATATATATTTAAATAAATTATATAAGTATATATA	<19>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,9:19:255,0,164	0/1:3,1:4:19,0,61	0/1:4,5:10:160,0,89
+chr21	16325630	chr21:16325630:M	TATATATATATATGTATTATATAT	<13>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,21:22:255,62,0	1/1:1,27:30:255,65,0	1/1:1,33:34:255,82,0
+chr21	16325924	chr21:16325924:M	TGTGTGTGCTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:20:255,60,0	1/1:0,20:21:255,63,0	1/1:0,15:19:255,53,0
+chr21	16326942	chr21:16326942:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:111,20,0	1/1:0,4:4:61,12,0	1/1:1,6:8:90,7,0
+chr21	16334137	chr21:16334137:M	TTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,51,0	1/1:0,12:14:255,39,0	1/1:0,14:17:255,44,0
+chr21	16339960	chr21:16339960:M	TATATATATATTTATATAGGTTATATATATATATTTATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,6:30:70,0,255	0/1:12,3:15:33,0,255	0/1:14,5:20:72,0,255
+chr21	16343728	chr21:16343728:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:0,32:33:255,86,0	1/1:3,33:37:255,52,0
+chr21	16349644	chr21:16349644:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47:48:255,142,0	1/1:0,47:49:255,144,0	1/1:0,57:61:255,180,0
+chr21	16351369	chr21:16351369:M	TTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:2,15:20:255,20,0	1/1:2,12:14:183,5,0	1/1:1,6:7:90,2,0
+chr21	16352876	chr21:16352876:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:25:255,73,0	1/1:1,42:44:255,111,0	1/1:0,39:40:255,118,0
+chr21	16353119	chr21:16353119:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,5:6:164,88,71,18,0,0	1/2:0,5,10:16:255,175,132,84,0,38	1/2:0,6,5:12:255,87,52,111,0,79
+chr21	16357494	chr21:16357494:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,21:22:255,65,0	1/1:0,20:20:255,60,0	1/1:0,16:18:255,51,0
+chr21	16365332	chr21:16365332:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:103,18,0	0/1:3,2:6:32,0,32	1/1:0,3:4:39,0,0
+chr21	16368736	chr21:16368736:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:212,35,0	0/1:6,7:17:99,0,57	0/1:2,8:18:124,0,8
+chr21	16369234	chr21:16369234:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:4:85,64,57,12,11,0	1/2:0,2,2:5:113,43,30,33,0,18	1/2:0,4,5:9:239,84,58,67,0,41
+chr21	16373579	chr21:16373579:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:13,14:28:175,0,148	0/0:34,0:34:0,100,255
+chr21	16387373	chr21:16387373:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/1:34,22:59:236,0,255	0/1:23,19:42:223,0,255
+chr21	16389399	chr21:16389399:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:3,34:39:255,51,0	1/1:1,47:50:255,119,0
+chr21	16390562	chr21:16390562:M	TTTTTTTTTTTTTTTTT	<18>,<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/3:2,1,1,3:8:63,45,64,35,47,90,0,3,29,58	1/2:1,4,3,2:12:91,45,54,32,0,103,56,21,72,144	0/2:9,0,9,0:20:204,213,255,0,133,202,222,255,231,255
+chr21	16393300	chr21:16393300:M	TTATTATTATTATTATTATTATTATTAT	<8.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,23:25:255,74,0	1/1:0,16:16:255,47,0	1/1:0,34:35:255,103,0
+chr21	16399731	chr21:16399731:M	TTTTGTTTTTTGTTTTTTGTTTTTTTT	<26>,<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15,0:26:207,0,132,255,206,255	1/2:0,12,12:25:255,255,255,207,0,255	0/2:15,0,15:30:255,255,255,0,255,255
+chr21	16400433	chr21:16400433:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6,1:13:147,0,105,97,72,152	1/2:3,16,4:24:255,8,30,227,0,214	0/2:4,1,6:12:81,71,175,0,60,46
+chr21	16407333	chr21:16407333:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,24:27:255,24,0	1/1:4,25:30:255,18,0	1/1:0,40:42:255,123,0
+chr21	16409823	chr21:16409823:M	TATATATATGTGTGTATATATATATATATATATATATATATATACACACACACATATATATATATACACACATATATATATATATA	<19>,<39>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,4:12:255,126,110,133,0,116	2/2:0,0,0:3:33,35,37,6,6,0	1/1:0,3,0:7:109,12,0,109,12,109
+chr21	16413109	chr21:16413109:M	ATATATATATATATATATATATATATATATATATA	<15.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:8,3,5:17:41,12,167,0,64,52	0/1:1,0,0:4:36,0,10,25,10,28	1/1:0,3,0:9:148,23,0,102,21,85
+chr21	16413143	chr21:16413143:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<24>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,6:7:173,20,0	1/1:0,0:2:16,5,0	1/1:0,1:4:26,3,0
+chr21	16414148	chr21:16414148:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,0:52:0,143,255	0/0:31,1:32:0,76,255	0/1:24,11:36:103,0,255
+chr21	16415006	chr21:16415006:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:14,20:34:252,0,146	0/0:56,0:57:0,167,255
+chr21	16417594	chr21:16417594:M	ATATATATATATATATATATATATATATA	<8.5>,<19.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:7:122,122,122,15,15,0	1/1:0,18,0:19:255,54,0,255,53,255	0/0:0,0,0:1:0,0,0,0,0,0
+chr21	16420341	chr21:16420341:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,22:26:255,22,0	1/1:2,27:29:255,51,0	1/1:0,21:23:255,67,0
+chr21	16427648	chr21:16427648:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:144,18,0	0/0:2,0:6:0,1,63	1/1:0,5:9:177,14,0
+chr21	16429651	chr21:16429651:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:91,9,0	0/0:0,0:2:0,0,0	1/1:0,2:3:77,9,0
+chr21	16431758	chr21:16431758:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:37:0,88,255	0/0:37,2:42:0,88,255	0/1:16,11:30:113,0,213
+chr21	16437303	chr21:16437303:M	AAAAAGACAAAAAAAAAAAAAGAAAAAGAA	<4.8>,<5.2>	.	.	Motif=AAAAAG	GT:AD:DP:PL	1/2:0,14,5:20:255,102,88,255,0,255	0/1:10,17,1:28:255,0,136,255,159,255	1/2:0,14,3:18:255,63,43,255,0,255
+chr21	16440491	chr21:16440491:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:20:0,40,255	0/0:12,0:15:0,38,220	0/1:14,8:23:77,0,201
+chr21	16448675	chr21:16448675:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:27,12:39:164,0,255	1/1:1,21:23:255,42,0	0/0:32,0:33:0,96,255
+chr21	16448713	chr21:16448713:M	TGTGTGTGTGTGTGTATGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,4:5:56,13,0	1/1:0,1:2:21,5,0	0/0:17,1:19:0,30,172
+chr21	16448733	chr21:16448733:M	TATATATATGTGTGTATATATATATGTATATATATATATATA	<22>,<29>,<30>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,3,3:8:189,189,189,36,36,13,36,36,0,13	3/3:0,0,3,5:14:233,228,225,59,52,41,21,14,2,0	1/3:0,7,0,2:11:76,39,28,64,16,210,48,0,199,194
+chr21	16448774	chr21:16448774:M	ACACACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,17,6:26:255,55,8,202,0,180	1/1:2,35,0:38:255,63,0,255,103,255	2/2:2,0,30:32:255,255,255,40,79,0
+chr21	16462413	chr21:16462413:M	CACAGACACACACACACACACACACACACACACACACACACACACACAC	<22.5>,<23.5>,<25.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,18,0:18:255,255,255,53,53,0,255,255,54,255	2/3:0,0,9,6:15:208,225,255,99,160,129,149,149,0,214	1/2:0,7,4,0:16:255,61,29,152,0,116,255,72,152,255
+chr21	16478618	chr21:16478618:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,8:23:75,0,200	0/0:12,2:16:0,2,170	0/1:9,10:25:145,0,97
+chr21	16503580	chr21:16503580:M	AAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:1,15:16:242,30,0	1/1:2,24:26:255,41,0
+chr21	16520902	chr21:16520902:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,9:24:255,161,196,228,0,255	0/1:9,6,0:17:72,0,99,116,123,255	1/2:1,13,7:22:255,102,136,216,0,255
+chr21	16534952	chr21:16534952:M	TTTTTGTTTTTTTTTTTTGTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,114,0	1/1:1,27:31:255,62,0	1/1:0,25:25:255,73,0
+chr21	16544226	chr21:16544226:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:28:226,0,119	0/1:17,21:39:255,0,181	0/1:15,20:37:255,0,170
+chr21	16546314	chr21:16546314:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,2:4:22,0,10	0/1:1,1:2:10,0,10	0/1:1,3:4:38,0,5
+chr21	16555773	chr21:16555773:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:47:255,138,0	1/1:0,42:42:255,123,0	1/1:2,49:51:255,114,0
+chr21	16558539	chr21:16558539:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:34,6,0	1/1:0,3:4:60,11,0	0/1:2,2:5:19,0,29
+chr21	16584313	chr21:16584313:M	ACACACACACACACACACACACACACACACACTCACAAACACAC	<21>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,8:23:78,0,207	0/1:16,11:28:119,0,196	0/1:17,13:31:151,0,214
+chr21	16588407	chr21:16588407:M	TTTTTTCTTTTCTTTCTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,96,255	0/1:17,16:33:160,0,175	0/0:41,0:41:0,119,255
+chr21	16615525	chr21:16615525:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,36:40:255,116,0	1/1:0,27:30:255,85,0
+chr21	16619903	chr21:16619903:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:108,18,0	1/1:1,10:13:153,10,0	1/1:1,16:18:255,33,0
+chr21	16622858	chr21:16622858:M	ACACACACACACACACACACACACACGTGCACACACACACACACA	<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6:21:47,0,212	0/1:6,10:17:123,0,64	1/1:1,14:15:231,26,0
+chr21	16627286	chr21:16627286:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:2,0,3:6:38,44,95,0,34,21	1/2:0,1,2:4:54,28,25,17,0,8	1/2:1,3,4:8:118,41,58,34,0,29
+chr21	16632173	chr21:16632173:M	TTTTTTTTTTTTTTT	<18>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8,0:9:255,24,0,255,13,252	1/2:0,8,3:13:255,79,65,228,0,229	2/2:0,0,4:7:149,136,132,18,8,0
+chr21	16634217	chr21:16634217:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,8:15:102,0,84	0/1:13,11:27:131,0,159	1/1:1,20:24:255,51,0
+chr21	16640784	chr21:16640784:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,25,0:26:255,75,0,255,76,255	1/2:0,4,8:14:255,148,113,71,0,42	1/1:0,27,1:29:255,84,0,255,67,255
+chr21	16653910	chr21:16653910:M	AAAAAAAAAAAAAAAAAAAAA	<16>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,2:13:255,31,14,255,0,255	1/1:0,5,0:6:157,18,0,157,18,157	2/2:1,0,5:6:63,80,150,2,18,0
+chr21	16658293	chr21:16658293:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,6,0:20:255,169,131,255,0,255,255,106,255,255	1/3:0,18,0,16:38:255,255,255,255,255,255,255,0,255,255	2/2:0,0,12,0:15:255,255,255,45,45,0,255,255,44,250
+chr21	16659712	chr21:16659712:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,17:31:228,0,154	0/1:31,17:49:157,0,255	1/1:2,38:41:255,84,0
+chr21	16663247	chr21:16663247:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:32:216,0,175	0/1:15,22:37:255,0,155	0/0:42,1:43:0,108,255
+chr21	16671838	chr21:16671838:M	TATTCTATCCATATTCTATTCT	<2.2>	.	.	Motif=TATTC	GT:AD:DP:PL	0/1:23,27:50:255,0,255	0/1:18,25:43:255,0,255	0/0:28,0:28:0,84,255
+chr21	16673104	chr21:16673104:M	ACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,16:32:255,0,255	0/1:15,7:23:127,0,255	0/0:28,0:29:0,87,255
+chr21	16682666	chr21:16682666:M	TATATATATATATATATATATATAT	<10>,<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,5,14:29:172,90,255,0,0,12	0/0:5,0,0:5:0,15,135,14,76,62	1/2:3,4,6:15:130,45,123,36,0,33
+chr21	16682690	chr21:16682690:M	TTTTTTTTTTT	<10>,<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/3:13,0,0,10:24:247,255,255,252,255,255,0,187,184,255	1/2:3,3,4,0:10:35,21,84,7,0,58,64,102,84,227	3/3:0,0,0,5:8:194,197,202,163,164,150,23,24,18,0
+chr21	16683234	chr21:16683234:M	CTCTCTCTCTCCCTCTGTCTCTCTCTCTCTCTCTC	<16.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:0,29:29:255,85,0	1/1:0,30:30:255,89,0
+chr21	16687644	chr21:16687644:M	AAAGAAAGAAAGAAAGAAA	<5.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:15,10:28:127,0,223	0/1:14,13:30:161,0,190	0/1:10,15:27:206,0,125
+chr21	16687752	chr21:16687752:M	TTTTTTTATTTTTATTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:35:199,0,255	0/1:15,14:29:164,0,182	0/1:20,19:39:235,0,254
+chr21	16689770	chr21:16689770:M	AAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:130,15,0	0/1:1,1:3:27,0,19	.
+chr21	16697281	chr21:16697281:M	ATTATTATTATT	<6>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,42:45:255,126,0	1/1:0,29:33:255,87,0	1/1:0,35:40:255,105,0
+chr21	16704013	chr21:16704013:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,52:52:255,152,0	1/1:0,49:49:255,142,0	1/1:0,55:55:255,160,0
+chr21	16710054	chr21:16710054:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:31:74,0,255	0/1:11,17:31:205,0,131	0/0:37,0:39:0,114,255
+chr21	16711351	chr21:16711351:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:15,0,60	0/1:1,4:6:50,0,9	0/1:5,7:12:85,0,51
+chr21	16714249	chr21:16714249:M	TATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,4:4:122,12,0	1/1:0,9:9:255,27,0
+chr21	16721263	chr21:16721263:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,44:44:255,130,0	1/1:0,39:39:255,115,0
+chr21	16730365	chr21:16730365:M	TTATTATTATTATTATTATTATTATTATTATTAT	<12.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10:10:189,30,0	0/1:5,2:8:12,0,76	0/1:10,7:17:79,0,135
+chr21	16743187	chr21:16743187:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:46:0,135,255	0/1:23,18:44:214,0,255	0/1:27,16:45:166,0,255
+chr21	16743301	chr21:16743301:M	TCTCTCTCTCTCTCTCTCTCTCACTCCCCTTTCTCTCTCTC	<19.5>,<21.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,16,0:17:255,50,0,255,51,255	1/2:0,15,11:27:255,193,234,255,0,255	1/2:0,9,15:24:255,255,255,163,0,186
+chr21	16751556	chr21:16751556:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,8:12:206,119,107,61,0,29	1/2:2,5,7:15:196,66,97,59,0,53	1/2:2,13,9:26:255,98,106,198,0,165
+chr21	16752589	chr21:16752589:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:25,22:47:255,0,255	0/1:20,17:38:206,0,255
+chr21	16755802	chr21:16755802:M	CCAAAAACAAAACAAAACAAAACCAAAAC	<1.5>	.	.	Motif=CCAAAA	GT:AD:DP:PL	0/0:29,1:31:0,65,255	0/1:13,5:19:81,0,255	0/0:34,1:39:0,77,255
+chr21	16764388	chr21:16764388:M	GTGTGTGTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:34:0,102,255	0/1:10,3:16:76,0,222	0/1:13,15:31:255,0,255
+chr21	16764407	chr21:16764407:M	TATATATATATATAATATATATATATGCACATATATATAT	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:7,2:9:9,0,99	0/1:12,11:32:109,0,255
+chr21	16764523	chr21:16764523:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGGTTTTG	<6.2>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/1:12,5:17:41,0,168	0/1:10,5:15:50,0,144
+chr21	16798416	chr21:16798416:M	AAAAAAAAAAAAAAAAAAAAAAAA	<12>,<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,1,4:5:83,94,131,58,69,55,17,17,0,3	0/2:4,0,4,3:11:88,111,252,0,113,90,24,91,24,59	1/2:0,19,2,1:24:255,60,11,255,0,255,255,25,255,255
+chr21	16818070	chr21:16818070:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:20:0,56,255	0/1:7,9:18:210,0,146	0/1:7,13:25:255,0,141
+chr21	16823200	chr21:16823200:M	TTCTCTTCTTTCTTCTTTCTTCTTTCTT	<1.8>	.	.	Motif=TTCT	GT:AD:DP:PL	0/0:35,4:39:0,11,255	0/1:10,12:22:254,0,191	0/1:20,13:33:247,0,255
+chr21	16825838	chr21:16825838:M	TATAGATATAGATAGATAGAGATATAGATATAGATACAGATATATAGATATAGATATA	<8.7>	.	.	Motif=TATAGA	GT:AD:DP:PL	0/1:11,10:21:130,0,149	0/1:8,7:15:82,0,100	0/0:20,0:20:0,59,255
+chr21	16829173	chr21:16829173:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,3:3:88,9,0	1/1:0,4:5:107,4,0
+chr21	16856678	chr21:16856678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:44:0,129,255	0/1:27,16:45:159,0,255	0/0:44,2:47:0,102,255
+chr21	16860273	chr21:16860273:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:2,32:34:255,65,0	1/1:2,41:43:255,90,0
+chr21	16860874	chr21:16860874:M	TTTTCTTTTTTTTTTTTTTTTTT	<22>,<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,8,1,4:17:213,86,82,191,49,255,137,0,216,233	2/3:3,2,6,8:21:204,198,255,64,64,83,16,39,0,85	1/3:2,10,1,6:23:255,120,120,255,79,255,173,0,255,255
+chr21	16866229	chr21:16866229:M	AAAAAAGAAAAAACAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:25:151,0,170	0/1:15,13:28:148,0,183	0/1:11,22:34:255,0,101
+chr21	16879285	chr21:16879285:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:8:224,24,0	1/1:0,24:25:255,72,0	1/1:0,4:5:126,15,0
+chr21	16880537	chr21:16880537:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,18:31:248,0,128	1/1:3,24:30:255,35,0	0/1:13,15:29:193,0,147
+chr21	16907243	chr21:16907243:M	AAAAATTAAAAATAAAAAAAAATAAAAATAAAAA	<5.5>	.	.	Motif=AAAAAT	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,15:15:255,45,0	1/1:0,24:24:255,72,0
+chr21	16907529	chr21:16907529:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:32:0,91,255	0/1:18,10:29:99,0,228	0/0:23,0:25:0,73,255
+chr21	16920035	chr21:16920035:M	TGTGTGTGTGT	<15.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:23,0,9:35:181,225,255,0,255,255	0/0:49,0,0:49:0,147,255,147,255,255	1/2:0,12,8:23:255,229,188,255,0,255
+chr21	16925983	chr21:16925983:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAAA	<42>,<43>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4,0:4:113,12,0,80,12,69	2/2:0,0,1:2:15,16,17,2,3,0	2/2:0,0,6:6:102,102,102,18,18,0
+chr21	16929294	chr21:16929294:M	TGAATGAATGAATGAATGAATGAA	<7>	.	.	Motif=TGAA	GT:AD:DP:PL	0/1:9,14:23:202,0,106	0/0:15,0:15:0,44,255	1/1:0,19:19:255,56,0
+chr21	16930625	chr21:16930625:M	TTTTTTTTTTTTTTGTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,1,16:42:255,255,255,0,255,255	0/0:24,0,0:26:0,75,255,75,255,255	1/2:0,23,16:40:255,255,170,255,0,255
+chr21	16930715	chr21:16930715:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:27:214,0,129	0/0:30,1:33:0,78,255	1/1:3,39:43:255,71,0
+chr21	16931315	chr21:16931315:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:33:0,54,255	0/0:29,2:31:0,59,255	1/1:0,6:8:91,17,0
+chr21	16937042	chr21:16937042:M	ATTTCTATTTCTATTTTTATTT	<3>	.	.	Motif=ATTTCT	GT:AD:DP:PL	0/0:42,2:44:0,83,255	0/1:31,5:36:15,0,255	0/1:13,6:19:86,0,255
+chr21	16941111	chr21:16941111:M	TTGTTTTTTTTTTTTTTTTGCTTTTGTTTTTGTTTTT	<6.3>	.	.	Motif=TTGTTT	GT:AD:DP:PL	0/0:6,1:8:0,4,104	0/0:8,1:11:0,12,148	0/1:7,3:10:27,0,104
+chr21	16941750	chr21:16941750:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:29,2:34:0,64,255	0/1:18,18:37:218,0,219
+chr21	16957263	chr21:16957263:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:46,6:52:0,45,255	0/0:31,0:31:0,91,255	0/1:14,18:33:229,0,150
+chr21	16970937	chr21:16970937:M	ATAATATAATATATTGTACATATTACATACTATAATATATTGTACATATTACATAACATAATATATTGTACATATTACATAATATAATATA	<2.6>	.	.	Motif=ATAAT	GT:AD:DP:PL	1/1:0,3:3:108,9,0	.	1/1:0,1:1:36,3,0
+chr21	16971741	chr21:16971741:M	ACATAACATAA	<1.8>	.	.	Motif=ACATA	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/0:9,0:9:0,27,243	0/1:6,3:9:54,0,135
+chr21	16975449	chr21:16975449:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:231,0,213	1/1:2,18:21:255,26,0	0/1:20,15:36:175,0,255
+chr21	16977305	chr21:16977305:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<18>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,24,0:24:255,72,0,255,71,255	1/1:0,20,1:21:255,63,0,255,44,255	1/2:0,15,12:27:255,220,142,255,0,198
+chr21	16996795	chr21:16996795:M	AGAGAGAGAGATAGAGAGAGAGAGA	<13.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/0:35,0:35:0,103,255	0/1:17,19:36:246,0,209
+chr21	17004191	chr21:17004191:M	TTTTTTTTTTTTTCTTTCTTTCTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:34:255,99,0	0/1:13,9:23:177,0,255	1/1:0,41:43:255,126,0
+chr21	17010741	chr21:17010741:M	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<17.2>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,3:5:70,4,0	0/0:0,0:4:0,2,4	1/1:0,1:3:38,3,0
+chr21	17010817	chr21:17010817:M	GGAGGGAAGGGGAGGGGATGGGAGGGGAGGGAAGGGAAGGG	<7.2>	.	.	Motif=GGAGG	GT:AD:DP:PL	1/1:0,18:19:255,42,0	1/1:0,15:15:253,44,0	0/1:6,10:16:126,0,56
+chr21	17021336	chr21:17021336:M	TCTCTCTCTCTTTCTCTCTCTCTCTCTC	<12>	.	.	Motif=TC	GT:AD:DP:PL	0/0:16,1:18:0,24,255	0/1:16,14:39:255,0,255	0/0:35,0:36:0,108,255
+chr21	17022773	chr21:17022773:M	AATAATAATAATAATAATAATAATAATGATAATAATAATAATAATAAT	<18>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/0:14,0:14:0,42,255	0/1:8,12:21:255,0,168
+chr21	17027733	chr21:17027733:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:155,18,0	1/1:0,6:8:195,23,0	0/1:2,1:5:12,0,65
+chr21	17031911	chr21:17031911:M	GAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAAT	<11.8>,<14.8>	.	.	Motif=GAATA	GT:AD:DP:PL	1/2:0,2,6:10:230,160,149,69,0,51	1/1:0,16,0:16:255,48,0,255,48,255	2/2:0,0,11:11:255,255,255,33,33,0
+chr21	17036135	chr21:17036135:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,2:37:0,72,255	0/0:13,0:16:0,46,255	0/1:12,8:21:78,0,158
+chr21	17040295	chr21:17040295:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,13:15:255,255,253,39,43,0	1/2:0,13,9:24:255,152,96,218,0,155	0/2:4,1,7:16:168,97,206,0,98,96
+chr21	17046109	chr21:17046109:M	ATATTATATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:31,13:44:128,0,255	1/1:0,24:24:255,71,0	0/0:40,0:40:0,118,255
+chr21	17046773	chr21:17046773:M	TCTTTTCTATCTTTTCTTTT	<2.2>	.	.	Motif=TCTTT	GT:AD:DP:PL	0/1:10,30:40:255,0,153	1/1:0,42:42:255,126,0	0/0:21,0:21:0,63,255
+chr21	17046900	chr21:17046900:M	TTTTTCTTTTTCTTTTTTTTTTTTTGTTTTTTTGTTTTTT	<41>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:18,0,125	0/0:17,0:17:0,50,255	0/1:2,5:7:67,0,14
+chr21	17069141	chr21:17069141:M	TATATATATATATATATACACATATATATGTGTGTATATATATATACATATATATATATATATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,13:17:255,2,0	1/1:0,23:27:255,81,0	.
+chr21	17082939	chr21:17082939:M	CACACACACAGACACACGCACACACACAGACACACGCGCACACACACACACAC	<28.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/0:12,0:12:0,36,255	0/1:8,5:15:113,0,180
+chr21	17085170	chr21:17085170:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:5:180,14,0	1/1:0,1:1:28,3,0	1/1:0,0:3:34,8,0
+chr21	17085264	chr21:17085264:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	0/2:4,2,7:15:162,50,116,0,81,99	0/0:2,0,0:4:0,9,55,9,60,71	1/1:0,5,1:7:113,18,0,58,8,49
+chr21	17085319	chr21:17085319:M	TATCTATCTATCTATCTATCTAT	<6.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/0:9,0:9:0,27,174	.	0/1:9,14:23:195,0,101
+chr21	17087610	chr21:17087610:M	GAAGAAAAAGAAGAAGAAAAGAAGAGGAAGAAGAAAAAGGAGGAGGAGGAGGGGAAGGAGAAGAATTATAAGAAGAAAAGAAGAGCAAGAGGAAGAAGAAG	<13>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,9:10:255,27,0	1/1:0,7:10:248,21,0
+chr21	17096524	chr21:17096524:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,20:37:255,0,191	0/1:17,21:39:255,0,187	0/1:26,27:53:255,0,255
+chr21	17100349	chr21:17100349:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<29>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6:10:142,74,145,84,0,67	2/2:0,0,2:2:24,30,59,6,6,0	1/2:0,1,0:3:40,16,13,23,0,18
+chr21	17100380	chr21:17100380:M	AATAATAATAATAATAATAATAATAAT	<8>,<11.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/2:4,0,4:15:104,80,126,0,18,103	0/1:7,0,0:9:4,0,83,29,108,217	1/2:0,13,1:17:220,52,16,204,0,255
+chr21	17112081	chr21:17112081:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,16,0:20:255,255,217,55,1,0,255,228,54,255	2/3:1,1,20,8:30:255,255,255,94,124,56,255,253,0,253	1/2:3,11,13,0:29:255,134,149,112,0,121,255,148,160,255
+chr21	17116180	chr21:17116180:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,10:12:142,0,0	0/1:8,9:19:117,0,80	1/1:2,10:13:139,0,0
+chr21	17116493	chr21:17116493:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,3:12:255,49,16,124,0,94	1/1:0,4,0:4:120,12,0,73,12,62	2/2:0,0,0:4:0,0,0,0,0,0
+chr21	17118409	chr21:17118409:M	AAAAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,3,28:32:255,255,255,95,40,0	0/2:6,1,8:15:194,117,254,0,145,136	1/2:0,21,18:41:255,255,195,255,0,255
+chr21	17120247	chr21:17120247:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,20:35:255,0,169	0/0:25,2:28:0,46,255	0/1:19,17:36:205,0,241
+chr21	17127850	chr21:17127850:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:40:255,118,0	0/1:21,15:37:167,0,255	1/1:3,49:55:255,104,0
+chr21	17130693	chr21:17130693:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,55:55:255,163,0	0/1:32,20:52:212,0,255	1/1:0,58:58:255,171,0
+chr21	17135247	chr21:17135247:M	AAAAAAAGAAAGAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	0/1:16,9:25:87,0,210	1/1:0,36:37:255,109,0
+chr21	17138814	chr21:17138814:M	GAAGGAAGGAAGGAAGGAAGGAAG	<10>,<11>,<12>	.	.	Motif=GAAG	GT:AD:DP:PL	1/2:0,6,6,0:12:255,114,80,114,0,80,255,98,114,255	0/1:21,9,0,0:30:179,0,255,161,255,255,238,255,255,255	2/3:0,0,8,11:19:255,255,255,204,203,150,149,127,0,94
+chr21	17138835	chr21:17138835:M	AAGCAAGAAAGCAAGC	<3>	.	.	Motif=AAGC	GT:AD:DP:PL	1/1:0,26:26:255,76,0	0/1:21,20:41:198,0,215	1/1:0,34:34:255,99,0
+chr21	17143208	chr21:17143208:M	GTGTGTGTGTGTGTGTGTGT	<12>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,14:30:255,0,255	0/0:39,0:40:0,120,255	0/1:15,13:30:255,0,255
+chr21	17144737	chr21:17144737:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:45:0,132,255	0/0:29,0:31:0,90,255	0/1:27,19:46:213,0,255
+chr21	17145268	chr21:17145268:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:31:255,72,0	0/1:15,10:27:105,0,192	1/1:0,31:31:255,91,0
+chr21	17146907	chr21:17146907:M	TGTTTTTTGTTTGTTTTTTTG	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,17:18:174,45,0	0/1:14,5:19:1,0,94	1/1:0,20:21:205,52,0
+chr21	17146930	chr21:17146930:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:10:222,21,0	0/0:4,0:5:0,12,127	1/1:0,5:6:185,10,0
+chr21	17168174	chr21:17168174:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:41:244,0,255	0/1:19,15:34:170,0,242	0/1:26,12:39:109,0,255
+chr21	17170900	chr21:17170900:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,3:34:0,45,255	0/0:36,4:40:0,47,255	0/1:23,31:59:255,0,254
+chr21	17174288	chr21:17174288:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:81,0,12	0/0:5,0:6:0,17,93	0/1:3,4:10:57,0,32
+chr21	17175314	chr21:17175314:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:44:0,111,255	0/0:42,1:44:0,111,255	0/1:28,20:50:228,0,255
+chr21	17176332	chr21:17176332:M	AAAAAAAAAAAAAAAAAGAAAAA	<17>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,15:19:216,255,255,0,72,16	0/2:3,0,14:17:190,237,255,0,52,2	1/1:2,20,0:24:255,9,0,255,37,255
+chr21	17178914	chr21:17178914:M	AAAAAAAAAAAAAAAAAAA	<13>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,13,11:25:255,255,255,201,202,131,227,226,0,154	0/2:8,0,11,0:23:255,255,255,0,253,220,193,255,254,255	1/3:0,20,0,8:29:255,249,190,255,146,255,255,0,255,255
+chr21	17186567	chr21:17186567:M	AAAAAAAAAAGAAAAAAGAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:28:248,0,255	1/1:0,22:25:255,66,0	0/1:17,15:32:255,0,255
+chr21	17197324	chr21:17197324:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:37:0,71,255	0/0:40,1:42:0,105,255	0/1:30,20:50:218,0,255
+chr21	17199969	chr21:17199969:M	ACACACACAGACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,17:36:255,0,255	0/0:33,0:33:0,99,255	1/1:2,28:32:255,43,0
+chr21	17224632	chr21:17224632:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<16.5>,<19.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4,0:5:122,12,0,121,11,120	1/1:0,3,0:3:92,9,0,92,9,92	2/2:0,0,3:4:91,91,91,10,10,0
+chr21	17235566	chr21:17235566:M	AAAAAATAAAAAAAAAAAAAGAAAGAAAAGAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,81,255	0/0:29,0:29:0,87,255	0/1:10,9:21:179,0,208
+chr21	17237590	chr21:17237590:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:47,2:51:0,114,255	0/1:20,17:39:209,0,255
+chr21	17254117	chr21:17254117:M	AAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:9:42,0,129	0/1:0,1:2:23,0,6	0/1:2,3:6:76,0,41
+chr21	17254229	chr21:17254229:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,2:44:0,91,255	0/1:16,16:32:197,0,195	0/1:19,28:47:255,0,218
+chr21	17262071	chr21:17262071:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20:37:255,0,179	0/1:15,15:31:181,0,174	0/0:37,0:38:0,111,255
+chr21	17266847	chr21:17266847:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,88,0	0/1:15,13:28:145,0,180	1/1:1,33:35:255,82,0
+chr21	17278372	chr21:17278372:M	AAAAAAAAAAAGAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,98,0	0/1:20,22:43:255,0,231	1/1:0,50:50:255,147,0
+chr21	17279810	chr21:17279810:M	GGGGGGGGGGGGG	<10>,<11>,<12>	.	.	Motif=G	GT:AD:DP:PL	1/3:0,9,0,7:16:255,107,135,229,106,203,227,0,139,199	3/3:0,0,0,4:5:49,63,109,52,74,63,3,13,12,0	1/2:0,9,5,0:14:255,77,37,140,0,99,255,64,138,255
+chr21	17283477	chr21:17283477:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:145,16,0	0/1:7,12:24:129,0,82	1/1:2,11:16:153,3,0
+chr21	17284947	chr21:17284947:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,45:45:255,131,0	0/1:12,22:34:248,0,91	1/1:0,35:35:255,102,0
+chr21	17289553	chr21:17289553:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,11:16:149,0,34	0/0:10,2:13:0,4,144	0/1:10,10:26:146,0,109
+chr21	17291500	chr21:17291500:M	TTTTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,12:24:255,218,255,254,0,212	0/1:6,14,0:21:255,0,115,255,102,255	1/2:2,14,8:27:255,110,182,255,0,255
+chr21	17305413	chr21:17305413:M	TTTTTATTTTTTTATTTTTTTTTTTTAATTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,11:22:255,199,137,200,0,137	0/2:8,0,9:17:210,154,255,0,209,183	1/2:0,4,8:12:255,141,108,71,0,37
+chr21	17308259	chr21:17308259:M	AAAAAAAAAAAAAACAAAAAAAAACAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:7,17:25:255,0,136	1/1:0,30:33:255,98,0
+chr21	17317336	chr21:17317336:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,4:10:178,68,67,54,0,34	0/2:3,0,3:7:64,51,130,0,80,66	1/2:0,10,3:16:255,51,15,181,0,144
+chr21	17321418	chr21:17321418:M	AAAAAATAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,10:22:111,0,127	0/1:25,5:31:2,0,255	0/1:6,15:24:205,0,34
+chr21	17326063	chr21:17326063:M	ACACACACACACACACACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,13:15:255,44,0	1/1:0,14:17:255,50,0	1/1:0,19:20:255,60,0
+chr21	17333813	chr21:17333813:M	TATATATATATATATATATAGTATATATATAGTATA	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,38:38:255,112,0	0/1:2,2:4:24,0,24	1/1:0,16:17:255,50,0
+chr21	17335836	chr21:17335836:M	TTTTTCTTTTCTTTTTCTCTTTCTTTTTTTTTTTTTTTTTTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:112,12,0	.	1/1:0,2:4:69,9,0
+chr21	17336845	chr21:17336845:M	AAATAAATAAATAAATAAATAAA	<6.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,20:41:137,0,79	0/0:18,0:25:0,58,238	0/1:10,5:22:9,0,96
+chr21	17337857	chr21:17337857:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:6,14:23:255,0,122	0/1:19,8:33:140,0,255	0/1:15,8:27:173,0,255
+chr21	17349582	chr21:17349582:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,22:39:255,0,255	0/1:10,14:28:255,0,199	0/1:22,10:37:180,0,255
+chr21	17352726	chr21:17352726:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,15:21:255,0,21	0/1:3,11:18:255,0,41	0/1:5,16:23:255,0,82
+chr21	17354984	chr21:17354984:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,29:45:255,0,157	0/1:13,13:27:161,0,151	0/1:16,26:45:255,0,170
+chr21	17357071	chr21:17357071:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:26,15:41:75,0,215	0/1:20,14:34:79,0,153	0/1:20,21:41:149,0,137
+chr21	17358528	chr21:17358528:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTATGTGTGCGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,19:35:253,0,186	0/1:8,12:20:154,0,83	0/1:11,9:20:105,0,142
+chr21	17361803	chr21:17361803:M	AAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:21:255,0,125	0/0:12,0:17:0,50,255	0/1:2,10:14:255,0,35
+chr21	17362108	chr21:17362108:M	AAAAAAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,13,7:25:255,70,164,255,0,255	2/2:2,0,20:24:255,255,255,26,68,0	1/2:1,21,7:34:255,110,124,255,0,255
+chr21	17362535	chr21:17362535:M	AAAATTAAAATT	<1.8>	.	.	Motif=AAAATT	GT:AD:DP:PL	0/1:19,19:39:255,0,255	1/1:0,32:32:255,96,0	0/1:14,21:35:255,0,214
+chr21	17364310	chr21:17364310:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<11>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,8,7:15:246,133,161,151,0,189	0/2:3,0,6:9:83,108,203,0,46,28	1/2:0,13,9:22:255,165,193,240,0,255
+chr21	17367127	chr21:17367127:M	AAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,3:6:65,52,89,0,52,69	0/1:1,5,1:8:71,0,4,54,7,83	0/1:2,2,0:7:18,0,40,20,43,85
+chr21	17367301	chr21:17367301:M	AAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2,0:4:65,7,0,42,6,36	2/2:0,1,7:8:236,125,102,24,6,0	1/2:0,3,1:7:143,27,9,71,0,56
+chr21	17369908	chr21:17369908:M	ATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,9:25:154,0,183	0/0:16,0:16:0,48,255	0/1:21,13:41:199,0,255
+chr21	17369929	chr21:17369929:M	TATATATATATA	<7>,<8>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,1,3:4:78,38,27,11,0,2	1/1:1,5,0:6:50,4,0,53,17,74	0/2:26,0,4:30:11,44,255,0,255,255
+chr21	17369969	chr21:17369969:M	TATATATATATATACATGTATATATATATATAT	<4.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,12:15:255,0,32	1/1:0,10:12:255,36,0	0/1:22,7:29:248,0,255
+chr21	17371646	chr21:17371646:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,11:31:255,171,111,255,0,255	1/1:0,30,0:31:255,93,0,255,91,255	0/2:18,2,8:28:82,86,255,0,255,242
+chr21	17372825	chr21:17372825:M	AAGAAGAAGAAGAAGAAGAAGAAG	<7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,40:41:255,119,0	0/1:15,23:38:255,0,170
+chr21	17375206	chr21:17375206:M	AGAGACAGAGACA	<1.8>	.	.	Motif=AGAGAC	GT:AD:DP:PL	0/1:21,6:27:87,0,255	1/1:0,37:37:255,111,0	0/0:47,0:47:0,141,255
+chr21	17381934	chr21:17381934:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>,<8.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,16,0,7:23:255,127,150,255,193,255,255,0,255,255	1/1:0,14,0,0:14:255,42,0,255,41,243,255,42,255,255	2/3:0,0,12,7:19:255,255,255,123,196,156,212,212,0,255
+chr21	17384220	chr21:17384220:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:143,18,0	.	0/1:14,17:33:255,0,255
+chr21	17384974	chr21:17384974:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,21,26:48:255,255,255,255,0,255	2/2:1,0,37:38:255,255,255,94,111,0	1/1:3,36,0:39:255,59,0,255,108,255
+chr21	17387683	chr21:17387683:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23,0:41:255,0,255,255,255,255	1/2:1,14,12:28:255,191,141,214,0,165	0/0:48,0,0:50:0,150,255,150,255,255
+chr21	17387964	chr21:17387964:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,14:42:146,0,255	0/0:25,0:27:0,78,255	0/1:19,13:33:139,0,255
+chr21	17391508	chr21:17391508:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,12:16:161,0,22	0/1:5,9:15:106,0,48	0/1:17,9:26:77,0,213
+chr21	17401499	chr21:17401499:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:22:93,0,160	1/1:1,35:41:255,89,0	0/0:27,2:30:0,51,255
+chr21	17407281	chr21:17407281:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,44:44:255,129,0	1/1:0,47:47:255,138,0
+chr21	17411233	chr21:17411233:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:16:0,47,255	0/1:5,8:13:98,0,47	0/0:15,1:17:0,32,255
+chr21	17422621	chr21:17422621:M	TTTGTTTGTTTGTTGTTTGTTGTTTTTTTTTTGT	<8.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:2,32:35:255,57,0	1/1:0,20:20:255,60,0
+chr21	17422802	chr21:17422802:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,12,0:35:125,0,255,194,255,255	1/2:0,13,8:21:255,141,81,195,0,171	0/0:33,1,0:35:0,84,255,102,255,255
+chr21	17423415	chr21:17423415:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:29:255,66,0	1/1:2,24:26:255,41,0	1/1:3,32:35:255,49,0
+chr21	17423597	chr21:17423597:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,5:16:42,0,148	0/0:18,0:18:0,53,255	0/1:18,4:23:3,0,254
+chr21	17425955	chr21:17425955:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,35:37:255,72,0	1/1:1,35:37:255,91,0	1/1:1,47:48:255,123,0
+chr21	17426908	chr21:17426908:M	AATAAATAAATAAATAAATAAATAAATAAATAA	<10.2>,<11.2>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,7,9:16:255,173,128,134,0,89	1/1:0,16,0:16:255,48,0,255,47,255	2/2:0,0,21:21:255,255,255,63,62,0
+chr21	17428199	chr21:17428199:M	TTTTTCTTTTTTTTTCTTTTTTTTT	<26>,<27>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,2:4:79,35,24,30,0,24	0/1:2,4,0:7:47,0,24,56,42,117	1/2:0,4,5:9:181,85,61,58,0,43
+chr21	17428635	chr21:17428635:M	AGTGCAGTGGAGTGCAGTGGAGTGCAGTGGAGTGCAGTGAAGTG	<6.8>	.	.	Motif=AGTGC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,26:26:255,78,0	1/1:0,32:32:255,96,0
+chr21	17429806	chr21:17429806:M	AAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,19:29:255,255,255,105,0,71	1/1:0,19,0:19:255,57,0,255,56,255	2/2:0,0,37:37:255,255,255,111,109,0
+chr21	17432731	chr21:17432731:M	GAAGGAAGGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGAAGG	<10.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:1,2:6:52,0,11	0/1:1,3:4:61,0,13	0/0:12,1:15:0,18,255
+chr21	17433559	chr21:17433559:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,43,0:43:255,129,0,255,127,255	1/1:0,34,0:36:255,108,0,255,105,255	1/2:0,17,13:30:255,200,149,255,0,222
+chr21	17434908	chr21:17434908:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAA	<41>,<42>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,10:13:255,187,153,38,2,0	2/2:0,0,9:10:255,178,154,26,26,0	1/2:0,7,6:13:255,105,67,123,0,85
+chr21	17436178	chr21:17436178:M	GGAAGGAAGGAAGGAAGGAAGGAAGG	<4.5>,<5.5>	.	.	Motif=GGAA	GT:AD:DP:PL	2/2:2,0,5:8:37,30,60,0,11,0	1/2:0,1,5:7:67,38,32,19,0,1	0/1:1,3,0:5:60,0,5,37,8,35
+chr21	17436201	chr21:17436201:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGAGAGG	<8>,<13>	.	.	Motif=AGGG	GT:AD:DP:PL	1/2:0,0,2:3:53,46,46,9,0,5	1/1:0,3,0:3:90,9,0,90,9,90	2/2:0,0,3:3:75,78,81,9,9,0
+chr21	17439342	chr21:17439342:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,11:28:255,207,128,255,0,243	1/1:1,32,1:34:255,82,0,255,82,255	0/2:26,0,22:48:255,255,255,0,255,255
+chr21	17440352	chr21:17440352:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,35:37:255,108,0	0/1:20,16:37:255,0,255
+chr21	17441929	chr21:17441929:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,24:26:255,48,0	1/1:2,26:30:255,52,0	0/1:28,14:45:153,0,255
+chr21	17443967	chr21:17443967:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTG	<21>,<27>,<28>,<29>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,7,3,7:18:255,255,255,202,203,168,178,198,79,149,126,199,0,75,162	3/4:0,0,0,4,6:10:255,255,255,223,224,207,98,98,97,69,65,66,54,0,36	1/2:1,11,2,0,0:17:255,6,34,255,0,255,255,45,255,255,255,68,255,255,255
+chr21	17454010	chr21:17454010:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,3,0,3:7:168,81,70,106,53,89,84,0,53,73	1/2:0,0,3,0:4:97,51,40,11,0,1,63,42,11,54	1/3:0,1,1,2:4:93,54,48,37,20,26,30,0,3,21
+chr21	17456517	chr21:17456517:M	AAAAAAAAAAAGAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,18,18:39:255,255,233,248,0,243	0/2:19,0,13:34:255,224,255,0,255,255	1/2:0,16,9:26:255,170,99,246,0,216
+chr21	17456963	chr21:17456963:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,24:24:255,71,0	1/1:1,35:36:255,88,0
+chr21	17457248	chr21:17457248:M	TTTTTTGTTTTTTGGTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,56,0	1/1:0,21:21:255,62,0	1/1:0,26:26:255,76,0
+chr21	17461784	chr21:17461784:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,7:8:212,124,102,24,6,0	1/2:1,1,5:9:144,54,59,10,0,16	1/2:0,3,5:10:204,83,68,48,0,24
+chr21	17462831	chr21:17462831:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,34:34:255,100,0	1/1:0,38:39:255,114,0
+chr21	17463131	chr21:17463131:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,6,0:8:159,0,5,112,17,111	1/2:1,3,5:11:135,53,67,43,0,33	1/2:3,8,5:18:228,22,66,101,0,107
+chr21	17464192	chr21:17464192:M	TTTTTTTGTTTTTGTTTTGTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:16:82,0,119	0/0:27,0:29:0,84,255	0/1:9,12:23:158,0,104
+chr21	17465277	chr21:17465277:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,19:38:243,0,243	0/0:25,1:27:0,51,255	0/1:12,20:32:255,0,124
+chr21	17466224	chr21:17466224:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,14:38:164,0,255	0/0:55,0:55:0,162,255	0/1:21,15:36:180,0,255
+chr21	17468375	chr21:17468375:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:71,12,0	0/1:3,8:13:115,0,15	1/1:1,6:10:119,9,0
+chr21	17470402	chr21:17470402:M	TTTTTTTTTTTTTTTTTTTTGTCTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:11:255,32,0	1/1:0,6:6:167,18,0	1/1:0,9:9:245,27,0
+chr21	17471023	chr21:17471023:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:1,17:20:255,41,0	1/1:2,12:15:179,9,0
+chr21	17476109	chr21:17476109:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,10:23:120,185,255,0,206,176	1/2:1,15,10:29:255,166,219,255,0,255	0/0:29,0,0:29:0,85,255,85,255,255
+chr21	17477581	chr21:17477581:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:25:138,0,151	0/0:13,1:18:0,34,252	0/1:18,4:22:7,0,255
+chr21	17478343	chr21:17478343:M	TTATTTATTTATTTAATTAATTAATTAATTTATTTATTTATTTATTT	<12.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:18,0:18:0,53,255	0/1:9,3:12:21,0,134
+chr21	17482556	chr21:17482556:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<11.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:6,7,0:14:105,0,75,142,99,255	0/1:4,4,0:8:49,0,49,71,61,162	0/2:4,0,3:7:36,55,141,0,64,55
+chr21	17484141	chr21:17484141:M	ATATATATATATATATATTTATATATATAT	<10>,<10.5>,<11>,<12>,<17>	.	.	Motif=AT	GT:AD:DP:PL	1/5:0,4,0,0,0,5:11:214,105,126,131,136,153,168,140,164,191,213,141,167,203,241,106,0,26,62,107,102	2/4:0,0,3,0,7,1:12:249,163,159,106,116,95,90,97,81,78,37,14,0,13,24,228,139,82,66,13,226	1/3:0,8,0,8,0,0:17:255,110,60,88,27,37,121,0,35,72,255,87,84,118,255,255,110,88,121,255,255
+chr21	17485034	chr21:17485034:M	TTTGTTTTTGTTTTTTTTTGTTTTGTTTTGTTTT	<6.6>	.	.	Motif=TTTGT	GT:AD:DP:PL	0/1:17,9:26:130,0,255	0/1:11,10:21:166,0,181	1/1:0,23:23:255,69,0
+chr21	17485435	chr21:17485435:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,22:39:255,0,185	0/1:14,18:32:225,0,155	0/0:43,1:46:0,117,255
+chr21	17486649	chr21:17486649:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:13:70,0,70	0/0:5,1:6:0,1,68	0/1:6,10:17:125,0,65
+chr21	17487433	chr21:17487433:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,1,15,5:21:255,255,255,76,71,28,255,206,0,217	1/2:0,5,21,0:26:255,255,255,86,0,9,255,255,84,255	1/3:0,9,1,10:22:255,175,233,255,157,255,255,0,149,218
+chr21	17487622	chr21:17487622:M	ACACACACACATACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:31:255,92,0	0/1:20,17:37:201,0,254	0/1:16,16:32:207,0,207
+chr21	17490960	chr21:17490960:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,5:13:251,90,53,123,0,108	1/1:2,10,1:13:150,3,0,130,20,178	1/2:0,2,8:11:225,134,113,23,0,7
+chr21	17500028	chr21:17500028:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:1,18:22:255,44,0	1/1:0,16:18:255,52,0
+chr21	17502090	chr21:17502090:M	TTTTCTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:10,3,0	0/1:1,3:5:45,0,2	1/1:0,0:2:20,5,0
+chr21	17504104	chr21:17504104:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:9,0,168	0/0:3,0:4:0,11,61	0/1:7,3:12:17,0,108
+chr21	17504994	chr21:17504994:M	AAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,7:10:251,118,90,51,0,22	2/2:0,2,13:17:255,246,203,50,16,0	2/2:0,2,14:16:255,246,202,47,13,0
+chr21	17505810	chr21:17505810:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:27:153,0,162	0/1:15,14:31:156,0,182	0/0:33,2:36:0,62,255
+chr21	17506009	chr21:17506009:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,42:42:255,123,0	1/1:0,43:45:255,132,0
+chr21	17507648	chr21:17507648:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:31:255,86,0	1/1:0,8:10:213,27,0	0/1:1,4:5:86,0,10
+chr21	17508972	chr21:17508972:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:73,7,0	1/1:0,3:4:37,0,0	0/1:0,2:3:24,0,2
+chr21	17511372	chr21:17511372:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,27:29:255,255,255,85,49,0	1/2:0,17,14:31:255,204,152,255,0,206	1/2:1,23,19:44:255,255,226,255,0,255
+chr21	17514566	chr21:17514566:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:0,41:41:255,120,0	1/1:2,52:55:255,125,0
+chr21	17514638	chr21:17514638:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,2:37:0,64,255	0/0:29,2:31:0,56,255	0/1:23,16:42:175,0,255
+chr21	17514974	chr21:17514974:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,19:48:216,0,255	0/0:44,1:46:0,117,255	0/0:47,0:47:0,139,255
+chr21	17524029	chr21:17524029:M	TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/0:9,0:11:0,32,182	0/1:10,11:22:141,0,122
+chr21	17529035	chr21:17529035:M	TTTTTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,9,94	0/0:3,0:4:0,12,125	1/1:1,13:14:255,11,0
+chr21	17530115	chr21:17530115:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9,0:9:156,26,0,156,26,156	1/1:0,4,0:4:66,12,0,66,12,66	1/2:1,2,5:8:131,67,62,12,0,22
+chr21	17531299	chr21:17531299:M	AAAAAAAAAAAAAGAAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,88,255	0/0:22,0:23:0,57,255	0/1:7,9:19:126,0,80
+chr21	17531938	chr21:17531938:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:26:0,64,255	0/1:11,18:31:199,0,72	0/0:36,2:43:0,88,255
+chr21	17534790	chr21:17534790:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6:18:58,0,142	1/1:2,18:21:255,27,0	0/1:12,7:22:69,0,166
+chr21	17541618	chr21:17541618:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,8,3:16:189,0,104,98,43,146	2/2:1,1,23:25:255,255,255,56,55,0	0/2:15,3,16:34:223,190,255,0,213,172
+chr21	17545773	chr21:17545773:M	TTTTTTTTGTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:129,0,147	1/1:2,30:32:255,59,0	0/1:15,21:38:255,0,152
+chr21	17550352	chr21:17550352:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,2:14:9,0,255	0/1:2,11:14:246,0,12	0/1:6,4:10:76,0,132
+chr21	17553615	chr21:17553615:M	TTTTTTTTTTTTTTTTTTTCTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,10:15:138,0,37	1/1:0,9:10:165,29,0	0/1:4,7:13:95,0,51
+chr21	17558082	chr21:17558082:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,17:33:255,0,255	1/1:0,46:47:255,138,0	0/1:15,27:43:255,0,255
+chr21	17559670	chr21:17559670:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:8:101,0,10	1/1:0,7:8:188,21,0	1/1:1,8:11:200,1,0
+chr21	17559972	chr21:17559972:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:34:255,0,185	1/1:0,41:43:255,126,0	0/1:22,16:40:199,0,255
+chr21	17565283	chr21:17565283:M	ACACACACACACACACACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,27:43:255,0,255	1/1:0,37:39:255,117,0	0/1:13,22:35:255,0,255
+chr21	17566947	chr21:17566947:M	AAAAAAAAAAAAGAAAGAAAAAGAAAAAAA	<29>,<31>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,9,16:28:255,255,255,152,0,180	2/2:1,0,23:24:255,255,255,53,69,0	1/2:4,14,16:37:255,228,255,194,0,255
+chr21	17567863	chr21:17567863:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:44:244,0,255	1/1:1,27:28:255,65,0	0/1:13,18:31:236,0,145
+chr21	17568126	chr21:17568126:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:9:108,8,0	0/1:2,4:6:49,0,16	0/1:3,4:8:57,0,28
+chr21	17568558	chr21:17568558:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,16,5:24:255,42,76,240,0,255	1/1:3,29,0:35:255,48,0,255,93,255	1/2:2,17,9:28:255,125,172,255,0,255
+chr21	17569360	chr21:17569360:M	TATATATTATATATATATATGTACATATAT	<16>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,16:33:210,0,228	0/0:16,0:17:0,47,255	0/1:12,14:26:185,0,148
+chr21	17572208	chr21:17572208:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,54,0	1/1:1,9:13:230,2,0	1/1:1,21:23:255,37,0
+chr21	17574999	chr21:17574999:M	ACATACATACATACATACATACATACATACATACATACATACATACATACATA	<10.8>,<12.2>	.	.	Motif=ACAT	GT:AD:DP:PL	1/2:0,11,9:20:255,171,244,255,0,255	1/1:0,23,0:25:255,75,0,255,74,255	1/2:0,17,16:33:255,255,255,255,0,255
+chr21	17575493	chr21:17575493:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,14:24:255,0,203	1/1:0,15:16:255,48,0	0/1:19,13:34:248,0,255
+chr21	17576088	chr21:17576088:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,7:15:77,0,86	0/1:11,9:21:87,0,130	0/1:13,8:21:74,0,159
+chr21	17579885	chr21:17579885:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/0:45,1:49:0,125,255	0/1:20,30:51:255,0,216
+chr21	17581848	chr21:17581848:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:212,35,0	1/1:0,7:7:123,21,0	1/1:0,6:7:117,20,0
+chr21	17581921	chr21:17581921:M	GTTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTTGTTT	<9>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,38:38:255,113,0	1/1:0,36:36:255,107,0
+chr21	17586383	chr21:17586383:M	TATATATATATATAATGTGTATATATATATATAATATATATTATATATGTATA	<27.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:1,0:1:0,3,18	0/1:5,7:12:96,0,57
+chr21	17589583	chr21:17589583:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/0:35,1:36:0,88,255	0/1:13,25:39:255,0,138
+chr21	17590229	chr21:17590229:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:31:255,54,0	1/1:2,26:29:255,50,0	1/1:3,27:31:255,37,0
+chr21	17599476	chr21:17599476:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,155	0/0:5,0:6:0,17,95	0/1:3,5:11:68,0,34
+chr21	17608374	chr21:17608374:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:43:0,107,255	0/0:26,0:26:0,76,255	0/1:17,15:32:180,0,215
+chr21	17614103	chr21:17614103:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,39:42:255,86,0	1/1:1,37:39:255,96,0	1/1:2,40:43:255,81,0
+chr21	17616336	chr21:17616336:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7:15:83,0,81	0/1:5,8:14:99,0,47	1/1:0,11:11:193,32,0
+chr21	17625226	chr21:17625226:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,1:48:0,123,255	0/0:47,0:48:0,141,255	0/1:25,20:46:243,0,255
+chr21	17630651	chr21:17630651:M	TTTTTTTTTTTTTTTTTT	<19>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,10,5:18:197,79,84,113,0,255	1/2:3,4,4:11:91,52,76,15,0,124	1/2:2,7,4:18:151,73,86,65,0,183
+chr21	17670334	chr21:17670334:M	TCTCTCTCTCTCTCTCTCTCTC	<10>	.	.	Motif=TC	GT:AD:DP:PL	0/1:13,20:36:255,0,152	0/1:14,21:35:255,0,149	0/0:36,1:37:0,90,255
+chr21	17673720	chr21:17673720:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:163,29,0	1/1:0,8:8:129,23,0	0/0:0,0:1:0,1,3
+chr21	17680037	chr21:17680037:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:14:3,0,142	0/0:10,0:12:0,34,183	0/1:5,4:11:45,0,63
+chr21	17680619	chr21:17680619:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,5:10:103,0,81	0/1:2,4:6:88,0,32	0/0:16,0:16:0,48,255
+chr21	17683821	chr21:17683821:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,7:27:255,83,112,255,0,255	0/1:13,6,0:21:138,0,255,161,172,255	0/2:3,0,6:10:64,81,207,0,39,13
+chr21	17685280	chr21:17685280:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTT	<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:19,18:37:255,0,255	0/1:15,9:26:163,0,255	0/0:46,0:48:0,144,255
+chr21	17692266	chr21:17692266:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,17:45:188,0,255	0/1:18,14:35:152,0,246	0/0:26,2:28:0,46,255
+chr21	17693272	chr21:17693272:M	TTTTTTCTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,11:16:154,0,44	0/1:7,8:16:102,0,75	0/0:22,0:23:0,67,255
+chr21	17693618	chr21:17693618:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:36:161,0,255	0/1:22,18:40:205,0,255	0/0:34,0:34:0,100,255
+chr21	17695717	chr21:17695717:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<5.2>,<11.2>	.	.	Motif=TTAT	GT:AD:DP:PL	1/2:0,19,10:29:255,193,225,255,0,255	0/1:8,20,0:28:255,0,155,255,144,255	0/2:10,0,7:17:83,132,255,0,187,139
+chr21	17698568	chr21:17698568:M	AAAAAAAAAAAGAAAAAAAAAAAAAAA	<19>,<26>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,5,11:25:252,139,255,120,0,109	0/1:6,5,0:16:113,0,149,136,103,221	0/2:7,0,8:21:72,126,255,0,133,83
+chr21	17703520	chr21:17703520:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGT	<22>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,10:21:255,148,115,191,0,133	1/2:0,12,7:19:255,99,63,198,0,146	2/2:0,1,15:16:255,246,243,47,30,0
+chr21	17711021	chr21:17711021:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,13:20:191,0,52	0/1:15,21:36:255,0,156	0/0:27,0:27:0,79,255
+chr21	17718102	chr21:17718102:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:16:139,0,194	0/1:2,7:12:168,0,18	0/0:9,0:11:0,30,253
+chr21	17722214	chr21:17722214:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:8,4:15:41,0,100	0/1:14,4:20:10,0,201
+chr21	17722924	chr21:17722924:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,20:36:255,0,190	0/1:14,23:38:255,0,134	0/0:31,1:33:0,79,255
+chr21	17723595	chr21:17723595:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:27:139,0,177	0/1:13,15:30:172,0,157	0/0:40,1:43:0,105,255
+chr21	17731757	chr21:17731757:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<12.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:2,13:15:216,6,0	0/1:4,2:6:19,0,55	0/1:12,5:17:45,0,175
+chr21	17737310	chr21:17737310:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:38,0,15	0/1:1,1:3:21,0,8	0/1:1,0:2:7,0,11
+chr21	17744946	chr21:17744946:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:6:0,14,80	0/0:15,0:17:0,49,255	0/1:7,3:11:19,0,99
+chr21	17745481	chr21:17745481:M	TTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,6:6:174,18,0	0/0:5,0:6:0,18,147
+chr21	17755233	chr21:17755233:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,3,14:19:255,255,229,48,1,0	2/2:0,0,9:10:255,193,167,30,29,0	1/2:3,6,5:15:177,29,49,29,0,100
+chr21	17756642	chr21:17756642:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:24:255,66,0	1/1:0,13:15:255,42,0	0/1:5,16:21:255,0,71
+chr21	17764534	chr21:17764534:M	ACACACACACACACACACACTCACACACACAC	<17>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,12:32:135,0,255	1/1:1,34:35:255,85,0	0/0:30,0:30:0,89,255
+chr21	17767776	chr21:17767776:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:38:255,0,169	1/1:0,43:43:255,126,0	0/0:34,0:36:0,105,255
+chr21	17786301	chr21:17786301:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:1,4:5:41,0,0	0/1:2,4:8:46,0,8
+chr21	17788586	chr21:17788586:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,35:37:255,72,0	1/1:0,26:26:255,76,0	1/1:3,35:39:255,60,0
+chr21	17789254	chr21:17789254:M	CACACACACACACACACACACACACACACACACA	<12>,<16>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,40,0:40:255,120,0,255,120,255	1/1:0,25,0:25:255,75,0,255,75,255	1/2:0,18,7:25:255,124,131,255,0,255
+chr21	17795005	chr21:17795005:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:18:255,35,0	1/1:1,13:14:202,24,0	0/1:17,7:26:55,0,230
+chr21	17812811	chr21:17812811:M	AAAAAAACAAAAAAAAACAAACAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/0:24,0:24:0,71,255	0/1:11,12:23:153,0,135
+chr21	17821900	chr21:17821900:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:1,15:17:251,32,0	0/1:13,12:26:137,0,163
+chr21	17826778	chr21:17826778:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:28:0,45,255	0/1:8,7:18:77,0,104	0/0:16,2:18:0,17,247
+chr21	17828370	chr21:17828370:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:32:255,83,0	1/1:0,31:32:255,94,0	1/1:2,30:34:255,63,0
+chr21	17833430	chr21:17833430:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:23:0,48,255	0/1:9,4:15:43,0,113	0/0:24,0:25:0,70,255
+chr21	17854771	chr21:17854771:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,26:40:255,0,144	1/1:2,34:38:255,76,0	0/0:33,1:34:0,82,255
+chr21	17858731	chr21:17858731:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,11:34:103,0,255	0/1:3,15:20:214,0,5	0/0:40,1:45:0,110,255
+chr21	17859355	chr21:17859355:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17:39:211,0,255	1/1:0,26:29:255,84,0	0/1:17,21:38:255,0,197
+chr21	17859472	chr21:17859472:M	CTTTCTCTTTCT	<1.8>	.	.	Motif=CTTTCT	GT:AD:DP:PL	0/1:20,20:40:255,0,255	1/1:0,38:38:255,114,0	0/0:33,0:33:0,99,255
+chr21	17863072	chr21:17863072:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,7,0,7:16:255,195,183,255,189,255,108,0,116,174	3/3:0,0,0,17:19:255,255,255,255,255,255,57,57,51,0	1/2:1,11,6,0:18:255,83,48,136,0,144,255,100,193,255
+chr21	17863624	chr21:17863624:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,17,1:43:255,0,255,255,255,255	1/1:0,27,2:31:255,87,0,255,55,255	0/2:11,1,16:29:219,225,255,0,189,127
+chr21	17865546	chr21:17865546:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,16:22:255,0,98	1/1:0,21:24:255,71,0	0/1:3,13:22:255,0,51
+chr21	17879632	chr21:17879632:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,1:2:12,0,6	1/1:0,0:1:1,1,0	0/1:1,4:6:51,0,10
+chr21	17880386	chr21:17880386:M	AAAAAACAAAAAAAAAAAAAAA	<29>,<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:4:92,10,0,61,9,52	2/2:0,0,3:3:89,57,49,9,9,0	1/2:0,4,3:7:181,50,29,66,0,46
+chr21	17882185	chr21:17882185:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:21:255,61,0	1/1:1,16:19:255,38,0	1/1:0,36:37:255,109,0
+chr21	17884241	chr21:17884241:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1:41:0,101,255	0/0:31,1:32:0,76,255	0/1:18,12:31:138,0,238
+chr21	17891086	chr21:17891086:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/0:21,0:24:0,66,255	0/1:5,15:23:231,0,23
+chr21	17896552	chr21:17896552:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,2:53:0,118,255	0/0:33,2:35:0,67,255	0/1:24,18:43:207,0,255
+chr21	17902139	chr21:17902139:M	TTTTTTTTTGTTTTTTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTT	<10.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,14:14:255,41,0	1/1:1,14:15:241,26,0	1/1:0,6:9:112,13,0
+chr21	17905587	chr21:17905587:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:34:224,0,161	1/1:3,25:29:255,34,0	0/1:22,16:39:164,0,255
+chr21	17917877	chr21:17917877:M	GTGTGTGTGTGTGTATGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/0:38,0:38:0,114,255	0/1:9,15:26:255,0,183	0/1:17,12:29:243,0,255
+chr21	17923463	chr21:17923463:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,63,255	0/1:5,5:11:99,0,103	0/1:8,1:10:0,0,187
+chr21	17926377	chr21:17926377:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:27:116,0,165	1/1:0,21:26:255,75,0	0/1:10,10:20:114,0,114
+chr21	17927209	chr21:17927209:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,11:35:54,0,194	0/1:11,9:25:94,0,69	0/0:23,3:26:0,35,252
+chr21	17929817	chr21:17929817:M	GGAGGGAGTGGGGAGGGAG	<2>	.	.	Motif=GGAG	GT:AD:DP:PL	0/0:38,2:40:0,65,255	0/1:13,22:35:255,0,254	0/1:16,17:33:255,0,255
+chr21	17934227	chr21:17934227:M	ATAAAAATAAAAAAAAAA	<2.8>	.	.	Motif=ATAAAA	GT:AD:DP:PL	0/0:23,2:25:0,33,255	0/1:13,21:34:255,0,165	0/1:13,18:31:255,0,173
+chr21	17934431	chr21:17934431:M	CTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:21,13:34:255,0,255	0/1:21,26:48:255,0,255
+chr21	17936465	chr21:17936465:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:37:0,90,255	0/1:16,15:35:160,0,217	0/1:18,20:41:240,0,233
+chr21	17938384	chr21:17938384:M	ATATATATAGATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:19,13:32:141,0,249	0/0:32,0:32:0,95,255
+chr21	17941287	chr21:17941287:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,7:14:93,0,49	0/1:4,4:9:43,0,43	1/1:0,7:10:131,24,0
+chr21	17945210	chr21:17945210:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,1,7:17:177,113,238,0,130,132	0/1:13,7,0:22:131,0,255,121,255,255	1/2:0,3,10:14:255,183,147,53,0,13
+chr21	17947533	chr21:17947533:M	ACACACACACAGACACACACACACACACACACACA	<16.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,26,0:42:255,0,182,255,255,255	0/2:16,1,16:33:191,255,255,0,224,203	1/1:0,34,0:35:255,103,0,255,105,255
+chr21	17948311	chr21:17948311:M	AAAAAAGAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:35:200,0,255	0/0:41,0:41:0,121,255	1/1:0,46:46:255,136,0
+chr21	17950493	chr21:17950493:M	ACACAACACACACACACACACACACACACACACACACACACAC	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:8,6:15:72,0,99	0/0:8,1:11:0,10,120	1/1:0,13:14:235,41,0
+chr21	17951108	chr21:17951108:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<14>,<15>,<19>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,23,16,0:40:255,255,255,253,255,183,255,255,0,255,255,255,255,255,255	3/4:0,1,1,17,9:29:255,255,255,255,255,255,255,255,255,255,255,255,255,0,255	1/2:0,29,13,0,0:43:255,238,110,255,0,255,255,201,255,255,255,239,255,255,255
+chr21	17952195	chr21:17952195:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,17	0/1:2,3:8:50,0,12	.
+chr21	17956280	chr21:17956280:M	CTCTCTCTCTC	<3.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:14,20:34:255,0,255	0/0:15,0:15:0,45,255	1/1:0,42:42:255,126,0
+chr21	17963064	chr21:17963064:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:13:157,31,0	0/0:0,0:1:0,0,0	1/1:0,10:10:144,29,0
+chr21	17963074	chr21:17963074:M	AATAATAATAATAATAATAATAA	<6.3>,<6.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/2:1,13,13:30:255,93,33,113,0,42	2/2:0,0,28:28:255,255,199,80,63,0	1/1:0,28,0:35:255,104,0,255,78,248
+chr21	17965912	chr21:17965912:M	TTTTTTTTTTTTTTTT	<17>,<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,15,8:26:255,255,255,165,162,93,255,255,0,208	1/3:0,9,0,7:16:255,213,186,255,119,255,153,0,250,238	2/2:0,2,19,2:27:255,255,255,55,10,0,255,255,38,255
+chr21	17966892	chr21:17966892:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,14:27:182,0,154	0/1:18,11:33:116,0,239	0/0:35,0:36:0,105,255
+chr21	17973395	chr21:17973395:M	TTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<7.4>,<7.6>,<8>	.	.	Motif=TTTTC	GT:AD:DP:PL	3/3:0,0,0,4:4:73,83,113,83,112,111,12,12,12,0	0/1:3,4,2,1:10:88,0,70,41,29,77,88,41,69,146	0/2:4,1,10,0:15:149,135,231,0,53,29,186,232,62,255
+chr21	17976271	chr21:17976271:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:5:115,15,0	.
+chr21	17977365	chr21:17977365:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:10:17,0,101	0/0:14,0:18:0,52,255	1/1:1,9:10:144,11,0
+chr21	17978717	chr21:17978717:M	AAAAAAGAAAAAAAAAGAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:19:93,0,69	0/1:9,10:20:91,0,76	1/1:1,13:15:178,25,0
+chr21	17988403	chr21:17988403:M	TTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:16,13:31:154,0,229	0/1:15,6:25:36,0,228	1/1:1,18:19:255,38,0
+chr21	17991659	chr21:17991659:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,13,0:20:255,0,95,236,95,255	1/2:0,10,8:21:255,114,76,194,0,142	0/0:10,0,2:13:0,30,255,0,174,141
+chr21	17992719	chr21:17992719:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,4:6:120,0,8	1/1:0,4:6:151,18,0	0/0:0,0:2:0,2,3
+chr21	18001774	chr21:18001774:M	TTTTTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3:7:32,52,174,0,61,43	0/1:2,7,2:14:216,0,44,194,0,216	0/2:4,0,1:6:3,17,135,0,67,53
+chr21	18003122	chr21:18003122:M	AAAAAAAAAAAAAACAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:14:165,0,126	0/1:6,8:17:170,0,143	0/0:16,0:18:0,53,255
+chr21	18003387	chr21:18003387:M	TTATTTTATTTTATT	<2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:15,28:43:255,0,163	0/1:13,9:22:99,0,172	0/0:27,0:27:0,80,255
+chr21	18008313	chr21:18008313:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,20:36:255,0,197	1/1:0,46:47:255,138,0	0/0:39,1:41:0,102,255
+chr21	18028209	chr21:18028209:M	CCTCCCCTCCCCTCCCCTCCCCTCCCCTTCCCCTTCCCCT	<7>,<8.2>	.	.	Motif=CCTCC	GT:AD:DP:PL	1/2:0,4,3:8:51,13,30,49,0,53	1/2:0,6,2:9:67,7,8,72,0,86	0/0:8,2,1:11:0,5,94,14,34,40
+chr21	18028246	chr21:18028246:M	CCTTTTCCTTTTCTTTTTCTTTTTCCTTTTCC	<2.3>,<6>	.	.	Motif=CCTTTT	GT:AD:DP:PL	1/2:0,1,6:18:179,148,171,52,0,48	1/2:0,3,4:8:160,96,102,73,0,62	0/2:6,0,4:11:69,95,255,0,136,115
+chr21	18028278	chr21:18028278:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<12.2>,<13.2>	.	.	Motif=CCTT	GT:AD:DP:PL	1/2:0,5,6:11:242,73,43,63,0,31	1/1:0,1,0:3:29,3,0,15,3,12	0/2:0,0,11:14:193,128,147,0,42,10
+chr21	18050927	chr21:18050927:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:43:0,126,255	0/0:31,3:37:0,55,255	0/1:24,18:44:214,0,255
+chr21	18056477	chr21:18056477:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/0:23,0:23:0,67,255	0/1:15,13:28:151,0,187
+chr21	18059494	chr21:18059494:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:39:255,96,0	1/1:1,34:37:255,91,0	0/1:17,11:29:113,0,231
+chr21	18084921	chr21:18084921:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/0:15,0:17:0,49,255	0/1:10,11:23:133,0,116
+chr21	18090727	chr21:18090727:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:9:0,5,103	0/1:3,5:10:61,0,37	0/1:9,11:23:162,0,95
+chr21	18108148	chr21:18108148:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:25:0,42,255	0/0:22,0:29:0,80,255	0/1:18,27:46:255,0,255
+chr21	18108838	chr21:18108838:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,14:25:255,250,180,178,0,110	1/2:0,15,10:25:255,171,98,255,0,184	0/1:16,16,0:33:255,0,255,255,255,255
+chr21	18117692	chr21:18117692:M	AATAAATAAATAAGATAAAATAAATAAATAAATAAGAAGAAATAAATAAATAAA	<12.5>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:7,10:20:81,0,41	0/1:3,5:11:40,0,15	0/0:16,0:18:0,44,201
+chr21	18122549	chr21:18122549:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:2,42:44:255,94,0	0/1:23,15:38:166,0,255
+chr21	18126596	chr21:18126596:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,21:40:255,0,226	0/1:23,14:38:145,0,255	0/1:17,23:40:255,0,190
+chr21	18129270	chr21:18129270:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:45:255,132,0	1/1:0,39:40:255,117,0	0/1:28,20:49:245,0,255
+chr21	18129873	chr21:18129873:M	TCTCTCTCTCTGTCTTTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:11,14:34:255,0,255	0/1:18,14:37:255,0,255	0/1:9,13:27:255,0,192
+chr21	18129893	chr21:18129893:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGT	<19.5>,<20.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,17,12,0:30:255,210,122,255,0,221,255,210,255,255	1/2:0,17,9,0:27:255,151,74,255,0,208,255,151,255,255	1/3:1,9,0,9:20:255,136,232,255,255,255,245,0,163,233
+chr21	18136106	chr21:18136106:M	AAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:87,9,0	1/1:0,2:4:71,9,0	0/1:0,2:5:59,0,1
+chr21	18136720	chr21:18136720:M	ATATATATATATATATATATATATATATATATATGTATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,17:18:255,36,0	1/1:0,0:2:16,4,0	1/1:0,5:6:68,4,0
+chr21	18145436	chr21:18145436:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:84,14,5,48,0,38	0/2:1,0,3:4:36,39,61,0,15,4	.
+chr21	18148885	chr21:18148885:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:33:255,94,0	1/1:3,45:49:255,91,0	1/1:0,30:35:255,98,0
+chr21	18151083	chr21:18151083:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,12:12:255,36,0	1/1:0,17:19:255,56,0
+chr21	18151989	chr21:18151989:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:19:255,57,0	1/1:0,22:25:255,69,0	1/1:0,17:18:255,54,0
+chr21	18158072	chr21:18158072:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,21:32:255,0,59	1/1:2,19:23:255,33,0	1/1:3,34:38:255,59,0
+chr21	18158839	chr21:18158839:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:10:143,28,0	1/1:1,6:8:85,8,0	1/1:1,5:8:72,5,0
+chr21	18158854	chr21:18158854:M	AAGAAGAAGAAAAGAA	<3.7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,1:1:20,3,0	1/1:0,1:1:20,3,0	1/1:0,3:3:61,9,0
+chr21	18162412	chr21:18162412:M	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCT	<22.5>,<25.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,19:19:255,255,255,57,57,0	1/2:1,8,11:20:255,255,255,113,0,185	1/2:0,10,2:13:183,49,29,162,0,250
+chr21	18167202	chr21:18167202:M	TCTCTCTCTCT	<3.5>,<7.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,16:17:255,255,255,48,51,0	2/2:0,0,17:20:255,255,255,51,60,0	1/1:0,3,0:4:76,9,0,84,12,105
+chr21	18167212	chr21:18167212:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,13:24:255,0,73	0/1:8,12:21:255,0,167	0/0:9,0:13:0,39,255
+chr21	18171115	chr21:18171115:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,24,18:44:255,255,215,255,0,255	1/2:2,15,14:32:255,220,169,192,0,197	1/1:1,51,1:53:255,138,0,255,137,255
+chr21	18171163	chr21:18171163:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:21:255,62,0	1/1:0,12:12:223,35,0	1/1:0,26:26:255,77,0
+chr21	18171737	chr21:18171737:M	TTTTTTTTTTTTTCTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,17:34:255,255,233,255,0,194	1/2:0,21,16:38:255,241,175,255,0,255	2/2:1,1,35:37:255,255,255,90,90,0
+chr21	18174099	chr21:18174099:M	ATATATATATATATATATCTTGGTGTATATATATATATATATATATATATATATATATATATA	<21.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,5:5:138,15,0	1/1:0,5:5:137,15,0	0/0:0,0:1:0,0,0
+chr21	18189630	chr21:18189630:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:53,9,0	0/1:3,3:6:33,0,33	0/1:1,2:5:43,0,3
+chr21	18194604	chr21:18194604:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:145,0,182	0/1:16,11:28:111,0,210	0/1:19,18:39:231,0,229
+chr21	18195029	chr21:18195029:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<9.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:5,6:11:78,0,58	0/1:11,12:23:161,0,139
+chr21	18201801	chr21:18201801:M	TTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:8:0,24,202	0/0:8,0:8:0,24,220	0/1:5,3:10:59,0,116
+chr21	18205738	chr21:18205738:M	TTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:22:255,65,0,255,66,255	0/1:11,12,1:25:138,0,132,180,165,255	1/2:1,9,6:20:255,137,136,152,0,239
+chr21	18206864	chr21:18206864:M	ATTATTATTATTATTATTATTATTATTATTATTTTATTAT	<11.3>,<12.3>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,29,0:29:255,87,0,255,86,255	0/1:3,11,0:14:255,0,45,196,53,213	1/2:0,12,5:17:255,80,44,223,0,177
+chr21	18207660	chr21:18207660:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:103,18,0	1/1:0,6:7:109,20,0	1/1:0,1:4:17,3,0
+chr21	18208172	chr21:18208172:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:38:0,97,255	0/1:21,0:29:22,0,255	0/1:13,11:30:243,0,255
+chr21	18211142	chr21:18211142:M	ACACACACACACACACACACACACACACTCACACTCACAC	<18>,<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,18,1:20:255,255,255,57,60,0,255,255,40,255	2/3:0,0,13,8:22:255,255,255,137,140,76,226,238,0,176	1/2:0,14,8,0:22:255,218,180,255,0,255,255,143,255,255
+chr21	18215200	chr21:18215200:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:41:0,120,255	0/0:38,1:39:0,97,255	0/1:25,17:43:176,0,255
+chr21	18219779	chr21:18219779:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:57,0:58:0,171,255	0/0:44,0:44:0,129,255	0/1:25,23:51:255,0,255
+chr21	18232943	chr21:18232943:M	ATATATATATATATATATATATATATATATGTATATATAT	<21>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,5:15:44,0,125	0/0:3,0:4:0,12,62	1/1:0,2:3:34,6,0
+chr21	18241250	chr21:18241250:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0,0:25:0,73,255,75,255,255	0/2:13,1,13:31:255,255,255,0,213,255	0/1:22,21,0:44:255,0,255,255,255,255
+chr21	18243548	chr21:18243548:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:39:0,105,255	0/1:19,14:33:148,0,235	0/0:20,1:23:0,46,255
+chr21	18251520	chr21:18251520:M	TATTTATTTTATTTATTATTT	<3.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,3:3:83,9,0	.	1/1:0,1:1:27,3,0
+chr21	18254135	chr21:18254135:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,0:46:0,135,255	0/1:23,26:51:255,0,255	0/0:52,1:53:0,138,255
+chr21	18254719	chr21:18254719:M	TCTATCTATCTATCTA	<3>	.	.	Motif=TCTA	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/1:19,29:48:255,0,204	0/0:42,0:42:0,124,255
+chr21	18260821	chr21:18260821:M	AACAACAACAACAACAACAACAACAACAAAAAAACACCACCAACAACAACAA	<15.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:11,7:18:134,0,244	0/0:22,0:22:0,66,255
+chr21	18261361	chr21:18261361:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1:21:0,41,255	0/0:17,2:21:0,26,255	0/1:17,10:29:114,0,219
+chr21	18263902	chr21:18263902:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2,0:40:0,81,255,114,255,255	0/1:23,13,0:38:111,0,255,186,255,255	0/2:14,2,11:32:232,166,255,0,244,255
+chr21	18264602	chr21:18264602:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:2,4,123,0,46,40	1/2:0,3,2:6:111,27,41,89,0,84	0/2:4,0,3:7:21,42,185,0,55,35
+chr21	18264624	chr21:18264624:M	AGAGAGAGAGA	<7.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:16,8:27:97,0,255	0/1:12,5:17:62,0,222
+chr21	18265311	chr21:18265311:M	ATATATATATAT	<5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:34:0,78,255	0/0:24,0:41:0,102,255	0/1:31,19:63:66,0,255
+chr21	18268938	chr21:18268938:M	CTCTCTCTCTCT	<4>	.	.	Motif=CT	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/1:23,24:47:255,0,255	0/1:19,32:51:255,0,255
+chr21	18271586	chr21:18271586:M	TTTTCTTTTCTTTTCTTTTTTTT	<5.6>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:17,18:35:243,0,224	0/1:21,21:42:255,0,255	0/0:47,0:47:0,139,255
+chr21	18276756	chr21:18276756:M	TTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0,0:6:0,18,170,18,170,170	0/2:4,0,7:14:217,200,255,0,105,81	1/1:0,11,0:13:255,39,0,255,39,255
+chr21	18280594	chr21:18280594:M	AACAACAAAACAACAA	<4.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:24,0:27:0,51,255	0/1:7,7:15:71,0,62	0/0:18,0:19:0,49,255
+chr21	18281026	chr21:18281026:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,3:50:0,91,255	0/1:27,23:52:255,0,255	0/0:44,0:44:0,130,255
+chr21	18285001	chr21:18285001:M	AAAAAAAAAAAAGAGAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:24:255,70,0	1/1:0,29:30:255,88,0	1/1:0,21:22:255,64,0
+chr21	18288529	chr21:18288529:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,3:5:95,52,75,53,0,45	1/1:0,3,0:5:109,15,0,111,15,114	2/2:0,0,2:2:34,40,58,6,6,0
+chr21	18300357	chr21:18300357:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:1,23:24:255,53,0	1/1:1,32:34:255,82,0
+chr21	18308377	chr21:18308377:M	ACACACACACACACACACACACACACACA	<17.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:14,1,8:23:171,184,255,0,255,255	0/0:20,0,0:20:0,60,255,60,255,255	1/2:0,15,10:25:255,255,214,255,0,255
+chr21	18308599	chr21:18308599:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,15:34:255,239,182,255,0,250	2/2:2,2,25:29:255,255,255,49,49,0	1/1:0,36,1:40:255,116,0,255,99,255
+chr21	18310934	chr21:18310934:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14,0:15:255,16,0,255,41,252	1/1:0,23,1:29:255,83,0,255,65,255	0/2:2,0,15:19:255,255,255,0,63,16
+chr21	18313336	chr21:18313336:M	TCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:20,15:39:207,0,255	1/1:0,27:31:255,80,0	0/1:27,19:49:255,0,255
+chr21	18313350	chr21:18313350:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,16:40:255,0,255	1/1:0,24:24:255,72,0	0/0:24,0:24:0,72,255
+chr21	18313894	chr21:18313894:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,0,14:27:190,244,255,0,186,114	0/0:23,0,1:25:0,74,255,56,255,255	1/2:0,12,17:34:255,255,255,255,0,255
+chr21	18315495	chr21:18315495:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,6:18:43,0,139	0/0:6,0:6:0,17,92	0/1:14,5:19:23,0,164
+chr21	18316025	chr21:18316025:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,26:26:255,76,0	1/1:0,16:16:255,47,0	1/1:0,30:33:255,96,0
+chr21	18319423	chr21:18319423:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:81,0,54	0/0:5,0:7:0,9,83	0/1:3,2:5:20,0,37
+chr21	18321350	chr21:18321350:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:52,2,0	0/1:2,2:7:41,0,15	0/1:1,3:5:50,0,3
+chr21	18331073	chr21:18331073:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,6:7:155,0,7	0/0:4,0:5:0,13,115	1/1:0,2:3:55,6,0
+chr21	18335940	chr21:18335940:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:27:255,70,0	1/1:1,31:32:255,76,0	1/1:1,30:32:255,76,0
+chr21	18338695	chr21:18338695:M	AGAGAGAGAGACAGAGACAGACAGAGAGAGAGATAAAGAGAGAGAAAGAGAGAGAGAG	<31>	.	.	Motif=AG	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/1:3,7:10:161,0,51	0/0:16,0:16:0,48,255
+chr21	18365744	chr21:18365744:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,69,255	0/1:9,3:14:11,0,116	0/1:3,3:7:44,0,29
+chr21	18369975	chr21:18369975:M	AAAAAAAAAAAAAAGAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,5:11:161,64,61,35,0,53	1/2:1,4,6:12:208,94,80,41,0,44	2/2:0,0,8:9:236,174,152,27,26,0
+chr21	18372099	chr21:18372099:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,6,0:17:55,0,142,104,190,255	1/2:1,7,10:20:255,242,224,103,0,154	0/1:4,7,0:11:87,0,36,118,68,255
+chr21	18376201	chr21:18376201:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:2,26:29:255,50,0	1/1:2,35:43:255,87,0
+chr21	18380168	chr21:18380168:M	CACACACACACACACACACACACACACACACACACACAC	<20.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,10,0:21:114,0,119,147,173,255	1/1:2,15,0:17:218,16,0,224,49,255	0/2:8,2,13:24:255,190,255,0,114,172
+chr21	18387597	chr21:18387597:M	ACACACACACACACATACACACACACACACACACACACACACACACACACACACGCACACACAC	<27>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,45,0	1/1:0,10:13:255,15,0	0/1:6,6:12:128,0,139
+chr21	18396809	chr21:18396809:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<12.8>,<14.8>,<33.8>	.	.	Motif=TCTA	GT:AD:DP:PL	1/2:0,9,4,5:18:255,98,67,210,0,198,255,47,168,255	2/3:0,0,3,7:12:150,145,142,71,71,60,79,74,0,60	1/2:1,7,4,0:12:238,72,71,138,0,153,249,97,173,255
+chr21	18402528	chr21:18402528:M	AAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,2:8:179,32,12,86,0,75	0/2:1,1,6:8:170,83,88,0,9,6	0/0:8,0,0:10:0,24,230,30,240,255
+chr21	18407426	chr21:18407426:M	TTTCTTTTTCTTTTTTTCTTTTCTTTTTTTTTTTTTTT	<5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:4,22:26:255,0,30	0/1:1,14:17:255,0,2	0/0:8,0:10:0,27,235
+chr21	18410117	chr21:18410117:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,18:30:246,0,118	0/0:19,0:21:0,61,255	0/1:11,8:19:89,0,143
+chr21	18410599	chr21:18410599:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:39:230,0,255	0/0:42,1:43:0,108,255	0/1:33,21:57:226,0,255
+chr21	18411340	chr21:18411340:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,21:36:255,0,154	0/1:19,20:39:237,0,219	0/0:38,0:38:0,112,255
+chr21	18413187	chr21:18413187:M	CCTTCCTGCCTTCCCTCCCTCCCTCCCTTCCTCTTCCTTCCTTCCTTTTCTCTCTCTTTCTTCCTTCCTT	<12>	.	.	Motif=CCTT	GT:AD:DP:PL	0/1:3,1:5:13,0,68	0/1:5,3:8:49,0,107	0/1:2,0:5:12,0,42
+chr21	18413585	chr21:18413585:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:21:236,0,204	0/1:11,6:19:118,0,240	0/0:12,0:13:0,36,255
+chr21	18419221	chr21:18419221:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:105,0,14	0/1:1,1:4:34,0,19	0/1:2,2:5:44,0,54
+chr21	18423410	chr21:18423410:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:12:65,0,65	0/0:14,1:15:0,26,223	0/1:2,7:10:104,0,7
+chr21	18440373	chr21:18440373:M	AAAAAAAAAAAAAAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:196,24,0	1/1:0,8:9:225,27,0	1/1:0,2:2:54,6,0
+chr21	18441282	chr21:18441282:M	AAACAAAACAAAACAAAACAAAACAAAACCAAAAAAACAAA	<11.2>	.	.	Motif=AAACA	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:10,7:17:141,0,221	0/0:30,0:30:0,90,255
+chr21	18441607	chr21:18441607:M	AAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,9:13:229,0,49	1/1:0,12:15:255,38,0	1/1:1,19:20:255,31,0
+chr21	18441662	chr21:18441662:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<11>,<12>,<13>,<16>	.	.	Motif=ATT	GT:AD:DP:PL	3/4:0,0,0,8,13:21:255,255,255,255,255,255,247,255,255,255,228,228,152,0,192	2/3:0,0,8,5,0:14:255,255,255,90,100,62,141,121,0,103,255,255,100,144,255	1/4:0,23,0,0,9:32:255,167,192,255,255,255,255,255,255,255,255,0,255,255,255
+chr21	18445207	chr21:18445207:M	TTTTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,17,10:31:255,147,220,255,0,255	0/2:7,0,12:21:172,208,255,0,117,62	1/2:0,15,10:28:255,182,206,255,0,255
+chr21	18447440	chr21:18447440:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:5:18,0,28	0/1:2,4:6:45,0,14	0/1:1,1:2:10,0,10
+chr21	18449859	chr21:18449859:M	ACACACACACACACACACGCACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,26:28:255,81,0	1/1:0,22:26:255,73,0	1/1:0,27:30:255,82,0
+chr21	18471477	chr21:18471477:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,26:45:255,0,225	0/1:14,23:38:255,0,148	0/1:27,23:50:255,0,255
+chr21	18472456	chr21:18472456:M	TATATATATATATATATATATATATA	<10>,<11>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,11,3,2:16:255,54,32,192,0,153,255,10,161,255	1/2:0,10,7,0:17:255,120,71,171,0,122,255,101,170,255	1/3:1,17,0,9:27:255,140,198,255,165,255,255,0,255,255
+chr21	18494091	chr21:18494091:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,18,1:29:255,0,100,255,165,255	1/2:2,12,9:23:255,124,92,143,0,165	0/1:16,9,0:25:90,0,215,138,255,255
+chr21	18494530	chr21:18494530:M	AAAAAACAAAACAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:18,12:30:125,0,229	0/0:38,0:38:0,112,255
+chr21	18496963	chr21:18496963:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,15:38:202,0,255	1/1:3,34:38:255,59,0	0/1:22,30:54:255,0,255
+chr21	18504705	chr21:18504705:M	TATATATATATATATATATATATATATATATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:5,0:6:0,17,153	.	1/1:0,4:4:135,12,0
+chr21	18506583	chr21:18506583:M	TTTTTTTTTTTCTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,19:32:255,0,255	1/1:0,32:32:255,96,0	0/1:24,20:45:255,0,255
+chr21	18506891	chr21:18506891:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:37:154,0,255	1/1:1,26:29:255,67,0	0/1:21,14:39:177,0,255
+chr21	18506936	chr21:18506936:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14,3:30:255,0,255,207,185,255	1/2:0,19,11:30:255,160,103,255,0,241	0/1:13,9,1:24:217,0,255,143,228,255
+chr21	18512845	chr21:18512845:M	CAAACAACAACAACAACAACAACAACAACAACAAAAAAAAAACAAAAACAAA	<6.2>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:10,16:26:255,0,175	1/1:0,36:36:255,108,0	0/1:6,14:20:255,0,91
+chr21	18513853	chr21:18513853:M	ATAAATAAATAAATAAATAAATAAATAA	<6>	.	.	Motif=ATAA	GT:AD:DP:PL	0/1:13,17:30:244,0,163	0/1:12,9:21:104,0,156	0/1:12,18:30:251,0,138
+chr21	18516435	chr21:18516435:M	ACACACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,19:39:247,0,255	0/1:20,21:42:255,0,236	0/1:24,18:43:210,0,255
+chr21	18519127	chr21:18519127:M	AAACAAACAAACAAACAAA	<3.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:8,15:23:225,0,87	0/1:18,11:29:116,0,242	0/1:23,11:34:109,0,255
+chr21	18519164	chr21:18519164:M	AACAACAACAACAACAACAACAA	<6.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:15,13:28:145,0,177	0/1:18,12:30:113,0,210	0/1:17,16:33:178,0,191
+chr21	18527500	chr21:18527500:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:24:132,0,151	1/1:1,18:20:255,41,0	0/1:12,12:25:149,0,143
+chr21	18528541	chr21:18528541:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:11,0,10:23:243,255,255,0,255,255	1/2:0,10,6:19:255,160,122,255,0,255	0/2:14,0,10:28:255,255,255,0,255,255
+chr21	18543627	chr21:18543627:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:32:255,94,0	1/1:3,30:33:255,44,0	1/1:4,41:45:255,60,0
+chr21	18548101	chr21:18548101:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:34:245,0,171	0/1:17,13:32:157,0,199	0/1:7,20:30:255,0,47
+chr21	18555872	chr21:18555872:M	ATATATATATATATA	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,22:40:255,0,194	1/1:0,30:31:255,88,0	0/1:23,26:50:255,0,255
+chr21	18570664	chr21:18570664:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:38:255,0,173	0/0:41,0:43:0,126,255	1/1:2,37:41:255,84,0
+chr21	18588171	chr21:18588171:M	AAAAAAAAAAAAAAAAAAAAGAAAGAAAGGAAAAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:43,0,33	0/1:3,1:5:4,0,40	0/1:1,3:7:54,0,8
+chr21	18597484	chr21:18597484:M	AAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,16:30:255,255,255,196,0,255	1/1:2,35,0:37:255,74,0,255,111,255	2/2:1,0,33:42:255,255,255,94,98,0
+chr21	18613195	chr21:18613195:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:11,0,13,0:25:158,181,255,0,181,122,226,255,161,255	2/3:2,2,11,5:20:202,174,255,54,109,94,170,154,0,255	0/1:5,12,1,0:20:255,0,88,209,69,242,255,87,255,255
+chr21	18625585	chr21:18625585:M	TTTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:22,0,13:35:255,211,255,0,255,255	0/0:41,0,0:42:0,126,255,123,255,255	1/2:0,12,12:26:255,193,119,214,0,142
+chr21	18630038	chr21:18630038:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,11:34:100,0,255	0/0:25,2:29:0,50,255	1/1:1,15:18:255,34,0
+chr21	18632516	chr21:18632516:M	GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,15:29:255,244,201,255,0,182	1/1:0,31,0:33:255,99,0,255,97,255	2/2:0,1,39:40:255,255,255,118,99,0
+chr21	18635482	chr21:18635482:M	ACACATACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<19.5>,<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/4:0,5,0,0,8:14:255,142,206,255,224,255,255,219,255,255,150,0,148,151,127	3/4:1,0,0,4,3:9:90,113,218,113,218,218,36,83,83,63,62,120,120,0,106	1/2:0,17,15,0,0:33:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
+chr21	18638775	chr21:18638775:M	CACACACACCATACACACACACACACAC	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,20:41:255,0,230	0/0:32,0:32:0,94,255	0/1:17,25:43:255,0,180
+chr21	18648171	chr21:18648171:M	CTATCTATCTAGCTATCATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATC	<19.2>,<20.2>	.	.	Motif=CTAT	GT:AD:DP:PL	0/2:2,0,1:3:18,18,48,0,37,49	0/1:9,3,0:12:19,0,127,46,159,255	1/2:0,6,3:9:171,55,29,94,0,85
+chr21	18648690	chr21:18648690:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,42:42:255,124,0	1/1:0,40:40:255,118,0
+chr21	18658665	chr21:18658665:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,2:35:0,66,255	0/1:14,14:30:162,0,164	0/0:17,2:22:0,28,255
+chr21	18661751	chr21:18661751:M	TTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:23,14:37:255,0,255	0/0:41,0:41:0,123,255	0/1:16,16:32:255,0,255
+chr21	18668457	chr21:18668457:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,21:28:255,0,111	0/0:37,0:40:0,114,255	0/1:21,15:38:255,0,255
+chr21	18669773	chr21:18669773:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTATT	<9.7>,<15.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,13,4:17:255,76,76,255,0,255	2/2:0,0,10:10:181,210,255,29,30,0	0/1:0,13,0:17:255,0,0,255,37,255
+chr21	18674538	chr21:18674538:M	ATATATATATGTGTATATATATACATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,6:16:85,0,195	0/0:11,0:11:0,33,255	0/0:15,2:17:0,5,255
+chr21	18682771	chr21:18682771:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:124,0,162	0/0:22,0:22:0,65,255	0/1:12,18:30:242,0,133
+chr21	18683495	chr21:18683495:M	TGTGTGTATGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,18:31:253,0,137	0/0:31,0:34:0,99,255	0/1:12,20:32:255,0,129
+chr21	18684544	chr21:18684544:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:14:37,0,45	0/0:7,0:10:0,10,69	0/0:9,0:9:0,25,105
+chr21	18692109	chr21:18692109:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:88,10,0	.	1/1:0,1:3:43,6,0
+chr21	18695530	chr21:18695530:M	CACACACACACACACACACACACACACACACA	<21>,<23>,<24>,<25>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,7,8,0:15:255,255,255,138,138,95,122,121,0,78,255,255,116,121,255	1/2:0,12,3,0,0:17:255,86,42,255,0,255,255,55,255,255,255,84,255,255,255	3/4:0,0,0,7,3:10:255,255,255,203,203,180,52,52,51,22,119,119,99,0,90
+chr21	18697021	chr21:18697021:M	TATATACATATATATAT	<10.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,43,0:43:255,129,0,255,129,255	1/2:0,19,7:27:255,197,140,255,0,255	1/1:0,36,0:36:255,108,0,255,108,255
+chr21	18705814	chr21:18705814:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:1,46:47:255,120,0	1/1:1,63:64:255,170,0
+chr21	18706968	chr21:18706968:M	TCCCTCTCCCTCTCCTTCTCC	<1.5>	.	.	Motif=TCCCTC	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:8,7:15:136,0,159	0/0:12,0:12:0,36,255
+chr21	18706982	chr21:18706982:M	CTTCTCCTTTTTCTTCTTCT	<2.3>,<7.3>	.	.	Motif=CTT	GT:AD:DP:PL	2/2:1,0,15:19:111,166,255,17,54,0	1/2:4,9,7:24:255,28,195,232,0,242	2/2:1,0,11:17:75,107,255,8,30,0
+chr21	18716677	chr21:18716677:M	GAAGGAAGGAAGGAAGGAAG	<6.2>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,32:36:255,87,0	1/1:0,32:34:255,92,0	1/1:0,47:48:255,139,0
+chr21	18727579	chr21:18727579:M	AAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,19,0:46:229,0,255,255,255,255	1/2:1,11,13:26:255,255,255,183,0,255	0/0:47,0,0:49:0,144,255,147,255,255
+chr21	18736210	chr21:18736210:M	AAAAAAAACAAAAAACAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,59,0	0/1:18,14:33:155,0,237	1/1:0,25:25:255,74,0
+chr21	18741702	chr21:18741702:M	ACACACACACACACACACACACACACACGCACACACACACAC	<23>,<29>,<30>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,11,6:17:255,255,255,108,108,58,197,197,0,148	1/3:1,8,0,6:15:255,140,142,255,101,255,191,0,225,207	2/2:0,0,4,0:4:125,125,125,12,12,0,82,82,12,70
+chr21	18758953	chr21:18758953:M	TTTTTTTTTTTTCTTTACTTTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:190,23,0	0/1:2,4:7:95,0,31	1/1:1,11:12:255,11,0
+chr21	18766361	chr21:18766361:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:43:255,125,0	0/1:17,13:33:255,0,255	1/1:0,62:67:255,192,0
+chr21	18784936	chr21:18784936:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,27:52:255,0,255	1/1:0,59:59:255,174,0	0/1:24,28:52:255,0,255
+chr21	18790419	chr21:18790419:M	ACACACACACACACACACACACACACACACACA	<11.5>,<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,14,0:33:255,0,255,255,255,255	0/1:7,21,0:29:255,0,133,255,195,255	0/2:11,0,14:26:255,255,255,0,255,247
+chr21	18791797	chr21:18791797:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:20:30,0,210	0/1:9,8:18:84,0,110	0/1:11,11:22:128,0,128
+chr21	18796472	chr21:18796472:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:13:78,0,69	1/1:2,8:13:122,1,0	0/1:4,4:9:53,0,44
+chr21	18796761	chr21:18796761:M	CACACACACACACACACACACACATACACACACACACACACAGACACA	<25>	.	.	Motif=CA	GT:AD:DP:PL	1/1:3,28:32:255,39,0	0/1:5,2:8:12,0,73	1/1:1,19:20:255,41,0
+chr21	18800869	chr21:18800869:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,6:10:89,114,210,0,45,24	1/2:1,3,1:5:39,2,17,36,0,73	0/0:2,0,0:2:0,6,35,6,35,35
+chr21	18802832	chr21:18802832:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,21:35:255,0,140	1/1:1,35:38:255,80,0	0/1:24,23:47:255,0,255
+chr21	18807399	chr21:18807399:M	CACACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,8:21:95,0,177	0/1:9,11:20:142,0,103	0/1:16,13:29:161,0,212
+chr21	18816512	chr21:18816512:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,15:25:210,0,92	1/1:2,27:31:255,56,0	0/1:13,19:37:255,0,138
+chr21	18820528	chr21:18820528:M	TTTTCTTTTTTTTTCTTTTTTTTTTTTT	<30>,<31>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10,0:27:198,0,255,177,255,255	1/2:0,8,4:14:255,63,28,136,0,121	0/1:6,11,1:18:255,0,116,173,136,255
+chr21	18827960	chr21:18827960:M	TTTTATTTTATTTTATTTATATTTTATTTTATTTATATTTT	<7.8>,<9.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/2:0,12,9:21:255,255,235,255,0,255	1/2:0,10,6:16:255,170,136,255,0,255	2/2:0,0,8:10:255,255,255,29,29,0
+chr21	18829614	chr21:18829614:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,2:17:7,0,255	0/0:12,0:12:0,36,255	1/1:0,3:3:77,9,0
+chr21	18829624	chr21:18829624:M	ATATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,22:35:255,0,255	0/1:2,10:16:255,0,26	1/1:0,30:36:255,108,0
+chr21	18831803	chr21:18831803:M	TTTATTTATTTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,16:29:224,0,166	0/1:14,23:37:255,0,146	0/1:20,18:38:227,0,255
+chr21	18846158	chr21:18846158:M	AATTAATTAATTAATTAATT	<6>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:12,12:25:160,0,163	0/1:10,8:20:113,0,123	1/1:0,32:33:255,97,0
+chr21	18848036	chr21:18848036:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,15:43:255,0,255	0/1:15,13:28:255,0,255	1/1:0,27:32:255,93,0
+chr21	18856187	chr21:18856187:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,6:18:122,0,250	0/1:19,14:33:255,0,255	1/1:0,27:28:255,81,0
+chr21	18859202	chr21:18859202:M	TATATATATATATATATATATATATGTATATATATATATATATATATATATATATATGTATATATATATATATATATATATATATATA	<9>,<16>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9,0:10:255,27,0,255,27,255	1/1:0,11,0:11:255,33,0,255,33,255	1/2:0,12,5:18:255,141,105,255,0,255
+chr21	18870047	chr21:18870047:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,23:40:255,0,199	0/1:11,11:22:129,0,129	0/1:21,30:52:255,0,228
+chr21	18884525	chr21:18884525:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,7,0:13:174,0,107,185,131,255	0/1:19,7,0:26:126,0,255,176,255,255	1/2:0,11,8:21:255,210,171,255,0,237
+chr21	18885273	chr21:18885273:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,1,10:24:230,161,255,0,255,255	0/1:9,18,0:30:255,0,210,255,240,255	0/2:13,0,11:28:238,184,255,0,255,255
+chr21	18891946	chr21:18891946:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:11:84,0,89	0/1:2,2:6:53,0,41	0/0:1,0:3:0,3,29
+chr21	18892031	chr21:18892031:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,4:13:137,0,214	0/1:6,1:11:15,0,212	0/1:3,0:6:11,0,84
+chr21	18901690	chr21:18901690:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:31:255,54,0	1/1:1,19:22:255,46,0	0/1:13,7:20:70,0,181
+chr21	18908717	chr21:18908717:M	GTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<7>	.	.	Motif=GTTTT	GT:AD:DP:PL	0/1:9,14:23:203,0,106	0/1:18,8:26:68,0,251	1/1:0,30:30:255,89,0
+chr21	18912184	chr21:18912184:M	TTTTTGTTTGTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,36:39:255,96,0	1/1:0,37:37:255,109,0
+chr21	18915208	chr21:18915208:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:38:255,94,0	1/1:3,38:42:255,70,0	1/1:0,53:55:255,161,0
+chr21	18920922	chr21:18920922:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,49:49:255,144,0	1/1:0,49:49:255,145,0
+chr21	18923133	chr21:18923133:M	AGATATAGATATAGATATAGATATAGATATAGATATA	<7.2>,<8.2>	.	.	Motif=AGATAT	GT:AD:DP:PL	0/1:16,23,0:39:255,0,197,255,255,255	0/2:6,0,16:22:255,255,255,0,107,109	1/2:0,18,8:26:255,149,75,255,0,255
+chr21	18926815	chr21:18926815:M	CCTCCCTCCCTCCCTCTCTTTTTTCCTTCCTTCCTCCCTCCCTCCCTCCTTCCTTTCCTTTCTCCCTCCCTCCCTCCC	<18.5>	.	.	Motif=CCTC	GT:AD:DP:PL	0/0:4,0:16:0,4,31	0/1:3,3:15:15,0,15	1/1:1,8:21:74,13,0
+chr21	18927353	chr21:18927353:M	GTGTGTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,37:37:255,109,0	1/1:0,33:34:255,100,0
+chr21	18942345	chr21:18942345:M	TCTCCCTCTCTCTCTCTCTCTCTCTCAATCTCTCTCTCT	<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,17:17:255,51,0	1/1:0,18:18:255,54,0	1/1:0,29:30:255,90,0
+chr21	18944354	chr21:18944354:M	CACACACACACACACACACACACACACGCACACACACAC	<18.5>,<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,20,0:34:255,0,160,255,220,255	1/2:1,18,9:31:255,148,182,255,0,255	0/2:20,2,12:34:118,179,255,0,255,255
+chr21	18945814	chr21:18945814:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,11,8:21:255,255,255,236,236,202,255,255,0,255	1/2:0,17,18,0:40:255,255,255,255,0,255,255,255,255,255	1/3:0,19,0,7:27:255,203,147,255,204,255,255,0,255,255
+chr21	18946786	chr21:18946786:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:30,16:46:156,0,255	0/1:20,16:37:193,0,255
+chr21	18957953	chr21:18957953:M	AAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:29:0,54,255	0/1:21,9:33:160,0,255	0/1:11,8:25:155,0,251
+chr21	18964657	chr21:18964657:M	CACACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/1:10,4:18:18,0,153	0/1:14,13:27:147,0,164
+chr21	18970348	chr21:18970348:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:85,9,0	0/0:6,1:9:0,1,164	0/0:11,0:12:0,36,255
+chr21	18981079	chr21:18981079:M	AAAAAAAAAAACAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,103,255	0/1:15,9:24:86,0,191	0/1:17,17:34:205,0,206
+chr21	18989204	chr21:18989204:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,55:57:255,130,0	0/1:23,14:37:143,0,255	1/1:0,51:51:255,151,0
+chr21	18989649	chr21:18989649:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,14:39:150,0,255	0/1:19,18:37:213,0,231	0/1:26,20:46:235,0,255
+chr21	18992545	chr21:18992545:M	TTTTTTTTTTTATTATTTTTT	<20>,<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,10,10,0:25:231,142,204,141,0,200,255,143,240,255	2/3:0,0,13,6:21:255,255,255,84,87,31,148,183,0,130	1/2:1,10,10,0:26:213,128,201,128,0,201,245,144,245,255
+chr21	19009436	chr21:19009436:M	AAAAAAAAAAATAAAAAATAAATAAAAAATAAAATAAAAAAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:21:200,0,47	0/0:6,1:7:0,4,86	0/1:7,10:17:126,0,73
+chr21	19022611	chr21:19022611:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,16,11:29:255,191,255,255,0,255	1/2:0,24,18:42:255,255,255,255,0,255	1/2:0,21,15:36:255,255,255,255,0,255
+chr21	19023140	chr21:19023140:M	AAAATAAAATAAAATAAAATAAAAAAATAAAATAAAATAATAAAATAAAATAAAATAAAACAAAACAAAATAAAA	<60>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,10:12:255,0,27	0/1:1,3:4:86,0,20	0/1:5,7:12:191,0,121
+chr21	19025137	chr21:19025137:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:26:143,0,171	0/1:15,19:35:231,0,162	0/1:19,20:40:242,0,233
+chr21	19036579	chr21:19036579:M	TTTCTTTCTTTCTTTCTTTCTTT	<3>,<3.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,4,3:7:188,22,1,26,0,5	1/1:0,0,0:1:13,3,0,6,1,4	0/0:13,1,0:17:0,10,255,17,255,255
+chr21	19036599	chr21:19036599:M	TTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,64,255	1/2:0,9,5:15:255,78,36,140,0,99	0/1:17,5,0:25:76,0,255,78,255,255
+chr21	19043910	chr21:19043910:M	ACACATACACACACACACACACACACACACACACACACACACACA	<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,12,0:13:193,21,0,196,38,222	1/2:0,7,4:12:210,76,44,97,0,82	0/1:10,9,0:19:99,0,116,129,169,255
+chr21	19066979	chr21:19066979:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,17:34:237,0,184	0/1:9,4:14:31,0,127	0/0:29,1:30:0,70,255
+chr21	19069366	chr21:19069366:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,6:24:255,160,106,255,0,255	1/2:0,6,13:23:255,255,255,114,0,115	0/1:20,12,0:33:123,0,255,215,255,255
+chr21	19071741	chr21:19071741:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:16:255,44,0	1/1:0,18:20:255,58,0	1/1:0,31:31:255,91,0
+chr21	19078947	chr21:19078947:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,4:14:255,71,77,239,0,223	0/1:1,5,0:8:144,0,23,137,26,155	0/2:2,0,4:7:61,70,162,0,33,15
+chr21	19081923	chr21:19081923:M	TTTATTTTATTTTATTTTATTTT	<3.6>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,33:33:255,97,0	1/1:0,36:36:255,106,0
+chr21	19082010	chr21:19082010:M	ACCTCCACCTCC	<1.8>	.	.	Motif=ACCTCC	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:17,21:38:255,0,255	0/0:27,0:27:0,81,255
+chr21	19094380	chr21:19094380:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAA	<47>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:53,9,0	0/1:1,2:5:39,0,3	1/1:0,6:9:122,23,0
+chr21	19095797	chr21:19095797:M	AAGGAAGGAAGGAAGAAAAGAAGGAAGGAAGGAA	<9.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:19,19:38:232,0,231	1/1:0,25:26:255,73,0	0/1:12,13:27:166,0,147
+chr21	19099925	chr21:19099925:M	AAAAAAAAATAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,2:35:0,68,255	0/1:20,22:43:239,0,216	0/0:54,0:54:0,158,255
+chr21	19102891	chr21:19102891:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:25,11:37:95,0,255	0/0:47,2:49:0,108,255
+chr21	19109672	chr21:19109672:M	TATCTATCTCTACTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<13>,<14>,<14.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,8,6,0:14:255,114,75,153,0,114,255,99,152,255	0/2:11,0,9,0:20:202,161,255,0,255,255,170,255,198,255	1/3:0,13,0,8:21:255,149,177,255,152,255,255,0,239,255
+chr21	19111472	chr21:19111472:M	AAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,9:15:255,161,125,70,0,36	1/2:0,7,2:10:223,31,4,116,0,100	2/2:0,1,8:11:248,157,132,30,12,0
+chr21	19111549	chr21:19111549:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3:14:12,0,158	0/0:28,2:31:0,56,255	0/1:10,13:25:165,0,113
+chr21	19118331	chr21:19118331:M	ACTCACTCACT	<2.5>	.	.	Motif=ACTC	GT:AD:DP:PL	1/1:0,52:52:255,144,0	1/1:0,40:40:255,111,0	1/1:0,39:39:255,108,0
+chr21	19121532	chr21:19121532:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:9:177,0,2	1/1:0,10:15:255,35,0	1/1:0,9:10:255,30,0
+chr21	19127600	chr21:19127600:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:82,9,0	0/1:3,4:12:101,0,66	0/1:6,2:11:26,0,151
+chr21	19128588	chr21:19128588:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0,0:17:0,50,255,50,255,255	0/1:1,3,0:6:47,0,3,50,4,88	0/2:3,0,9:12:120,153,255,0,44,17
+chr21	19135957	chr21:19135957:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:6:119,85,93,12,17,0	0/0:1,0,0:2:0,6,45,3,34,30	1/2:0,3,5:8:219,83,61,51,0,27
+chr21	19153216	chr21:19153216:M	ATATATATATATATA	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,29:32:255,87,0	1/1:0,27:29:255,81,0	1/1:0,41:41:255,123,0
+chr21	19153952	chr21:19153952:M	ATATATATATACATATATATATATATATATATATATAT	<24>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,3:12:255,39,12,255,0,247	1/2:0,0,2:3:37,26,23,12,0,6	1/1:0,3,0:4:107,12,0,107,12,107
+chr21	19154977	chr21:19154977:M	TTTTATTTTTTTTTTATTTTTTATTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:29:255,86,0	1/1:0,14:15:236,30,0	1/1:2,27:29:255,49,0
+chr21	19156588	chr21:19156588:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:120,15,0	0/1:4,2:8:65,0,104	1/1:0,2:4:76,10,0
+chr21	19157299	chr21:19157299:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,38:38:255,112,0	1/1:0,42:42:255,124,0
+chr21	19158838	chr21:19158838:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,38:39:255,96,0	0/1:14,16:30:201,0,164	1/1:1,38:39:255,96,0
+chr21	19161732	chr21:19161732:M	TTTTTTTTCTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:16:255,38,0	0/1:7,4:13:63,0,165	1/1:0,8:10:216,27,0
+chr21	19165953	chr21:19165953:M	TATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<9>,<13>,<14>	.	.	Motif=TATC	GT:AD:DP:PL	2/3:0,0,6,12:18:255,255,255,197,230,179,115,115,0,63	1/3:0,7,0,10:17:255,180,255,255,180,255,196,0,196,166	2/3:0,0,10,11:21:255,255,255,175,205,145,186,187,0,127
+chr21	19173721	chr21:19173721:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12,0:14:192,21,0,226,36,255	0/1:9,6,0:21:64,0,103,107,124,255	1/2:2,6,5:18:131,66,121,72,0,133
+chr21	19175582	chr21:19175582:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<10>,<10.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,10,0:13:211,32,0,64,14,33	1/1:0,2,0:3:39,6,0,12,2,6	1/2:0,12,9:24:255,62,1,71,0,10
+chr21	19175740	chr21:19175740:M	AAAAAAACAAAAACAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,15:15:255,44,0	0/1:11,8:19:94,0,151
+chr21	19183991	chr21:19183991:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,10:10:177,177,177,29,29,0	2/2:1,1,5:7:79,57,79,3,3,0	1/2:0,4,9:13:230,130,118,68,0,31
+chr21	19186895	chr21:19186895:M	ACACACACACACACACACACACACACACACACACACA	<17.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,7,11:18:255,255,255,194,195,144,105,124,0,72	1/2:0,16,15,0:33:255,249,255,255,0,255,255,250,255,255	0/3:11,0,2,14:27:255,255,255,210,255,255,0,196,160,249
+chr21	19189969	chr21:19189969:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:54,9,0	.	0/0:2,0:3:0,8,45
+chr21	19195354	chr21:19195354:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:3:78,9,0,49,8,41	0/1:7,2,0:9:23,0,150,25,91,93	2/2:1,3,11:18:136,79,135,1,7,0
+chr21	19195365	chr21:19195365:M	ATATATATATATATATATA	<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,13,7:24:255,114,46,240,0,181	0/1:7,1,0:13:1,0,197,21,203,221	0/2:13,0,6:25:111,75,255,0,255,255
+chr21	19200118	chr21:19200118:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25,0:25:255,74,0,255,74,255	1/1:0,6,0:6:106,18,0,106,18,106	1/2:0,9,7:16:255,126,80,137,0,116
+chr21	19200131	chr21:19200131:M	CACACACAAACACACACACACACACACACACACACACACACACACACA	<18>,<19>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,14,16:32:255,255,173,248,0,161	1/1:0,9,0:9:255,27,0,169,26,144	1/2:0,8,10:19:255,162,108,138,0,86
+chr21	19203510	chr21:19203510:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,74,0	0/1:20,25:46:255,0,221	0/1:26,20:48:237,0,255
+chr21	19204326	chr21:19204326:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,37:44:255,72,0	0/1:17,21:39:255,0,195	1/1:1,43:44:255,111,0
+chr21	19214306	chr21:19214306:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:74,9,0	1/1:0,2:3:49,6,0	1/1:0,6:7:162,21,0
+chr21	19216242	chr21:19216242:M	ACACACACACACACACACACAAACACACACACACACATACACACACACA	<27.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/0:19,0:20:0,60,255	0/1:10,11:23:249,0,211
+chr21	19223273	chr21:19223273:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,1:40:0,99,255	0/0:32,0:33:0,97,255	0/1:18,13:32:143,0,243
+chr21	19225155	chr21:19225155:M	TTTTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33,1:36:255,107,0,255,87,255	1/2:0,18,23:43:255,255,255,255,0,191	1/2:0,21,20:44:255,255,255,255,0,255
+chr21	19227216	chr21:19227216:M	AAAAAAAAAAACAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0,0:30:0,89,255,90,255,255	0/1:21,24,0:46:255,0,235,255,255,255	0/2:15,0,11:28:255,255,255,0,255,255
+chr21	19232571	chr21:19232571:M	TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCT	<22.5>,<23.5>,<24.5>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,1,11,9:21:255,255,255,123,106,61,161,105,0,100	2/3:0,4,11,10:25:255,255,255,135,78,61,190,64,0,120	1/2:0,16,9,0:27:255,123,45,228,0,153,255,97,224,255
+chr21	19232605	chr21:19232605:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTG	<14>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0:33:255,99,0,255,99,255	1/2:0,3,9:17:255,255,252,122,0,90	0/1:6,12,0:25:255,0,137,255,184,255
+chr21	19233751	chr21:19233751:M	TTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.2>,<9.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,12,9:21:255,163,103,217,0,158	1/1:0,22,0:23:255,69,0,255,68,255
+chr21	19242184	chr21:19242184:M	TTTTTTTTTTTTTCTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:31:0,62,255	0/1:18,17:37:255,0,255	0/0:26,0:28:0,83,255
+chr21	19248635	chr21:19248635:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:40:0,118,255	0/1:18,10:28:96,0,238	0/0:44,0:45:0,132,255
+chr21	19253451	chr21:19253451:M	TATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,52:53:255,159,0	1/1:0,16:19:255,48,0	1/1:0,16:16:255,48,0
+chr21	19254775	chr21:19254775:M	TATATATATATATATATATA	<8>,<9>,<12>	.	.	Motif=TA	GT:AD:DP:PL	3/3:0,0,0,27:27:255,255,255,255,255,255,81,81,81,0	2/3:0,0,16,5:21:255,255,255,138,141,94,255,255,0,255	1/3:0,14,0,12:28:255,255,255,255,255,255,255,0,255,255
+chr21	19260501	chr21:19260501:M	CACACACACACACACACACACACACACACACACACACACACACACACA	<13>,<25>	.	.	Motif=CA	GT:AD:DP:PL	0/2:10,0,3:13:14,52,255,0,172,135	0/2:8,0,8:17:86,132,255,0,132,86	0/1:5,18,0:23:255,0,77,255,84,255
+chr21	19261662	chr21:19261662:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:79,9,0	1/1:0,4:5:108,13,0	1/1:0,2:2:54,6,0
+chr21	19266518	chr21:19266518:M	ATATATATATATATATATGTATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:31,0:36:0,93,255	0/1:10,13:24:255,0,186	0/0:34,0:35:0,102,255
+chr21	19266542	chr21:19266542:M	ACACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:22,27:49:255,0,237	0/1:16,11:27:103,0,186	0/0:42,1:44:0,111,255
+chr21	19267499	chr21:19267499:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<7.5>,<12.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,29,0:29:255,255,255,86,87,0,255,255,87,255	1/2:0,16,16,0:33:255,255,255,255,0,255,255,255,255,255	2/3:1,0,7,19:27:255,255,255,255,255,255,112,200,0,137
+chr21	19271087	chr21:19271087:M	AAAATAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0,0:30:0,89,255,86,255,255	0/2:15,0,17:32:255,255,255,0,255,255	0/1:8,22,0:32:255,0,162,255,217,255
+chr21	19271733	chr21:19271733:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:0,17:18:255,52,0	1/1:0,12:12:220,35,0
+chr21	19274180	chr21:19274180:M	TTTTTCTTTCTTTCTTTTCTTTTTTTTTTTCTTTTCTTTCTTTTTTTTATTTTTTT	<59>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:13:0,39,255	0/1:4,7:12:193,0,83	0/1:9,7:17:177,0,213
+chr21	19276693	chr21:19276693:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:50,0:52:0,153,255	0/1:13,23:37:255,0,132	0/0:56,2:58:0,134,255
+chr21	19278413	chr21:19278413:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/1:23,11:35:102,0,255	0/1:12,19:32:255,0,126
+chr21	19283563	chr21:19283563:M	ACACACATACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:35,0:35:0,98,255	0/0:29,0:29:0,81,255	0/1:10,22:36:206,0,52
+chr21	19288908	chr21:19288908:M	ATACATACATACATACATACATACATACATACATACATACATACATAC	<11>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:11,11:23:140,0,130	0/0:16,0:17:0,50,255
+chr21	19292919	chr21:19292919:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:2,21:24:255,33,0	0/1:12,11:24:121,0,149	0/1:12,14:27:172,0,144
+chr21	19295856	chr21:19295856:M	ACAACAACAACAACAACAACAACAACAACGACAACAA	<13.3>	.	.	Motif=ACA	GT:AD:DP:PL	1/1:0,38:38:255,112,0	0/1:16,15:31:180,0,198	0/1:10,13:24:173,0,125
+chr21	19299309	chr21:19299309:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:32:0,93,255	0/0:26,1:28:0,64,255	0/1:34,13:47:91,0,255
+chr21	19309904	chr21:19309904:M	TTTTTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,4,5:11:143,51,55,24,0,60	0/1:3,2,0:5:19,0,35,28,49,101	0/2:7,0,2:10:26,33,127,0,117,169
+chr21	19324621	chr21:19324621:M	ACACAAACACACACACACACATACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,33:33:255,99,0	0/1:11,10:23:216,0,233
+chr21	19328514	chr21:19328514:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:0,0,62	0/0:0,0:1:0,3,11	0/1:2,3:5:36,0,19
+chr21	19329744	chr21:19329744:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,28:28:255,82,0	0/1:17,18:35:230,0,209
+chr21	19331481	chr21:19331481:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,3:8:115,35,31,43,0,58	0/1:4,5,0:9:59,0,42,71,68,173	0/2:4,0,4:9:84,68,123,0,75,95
+chr21	19341575	chr21:19341575:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:21,0,102	0/1:2,7:9:92,0,7	0/1:10,7:19:67,0,138
+chr21	19345531	chr21:19345531:M	TATATATATATATATATATATA	<8>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,35,0:36:255,105,0,255,105,255	1/2:0,9,5:15:255,88,110,244,0,229	1/2:0,21,10:32:255,191,217,255,0,255
+chr21	19349676	chr21:19349676:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,6:11:104,116,184,5,13,0	1/2:1,5,5:13:136,70,112,82,0,130	0/0:7,1,0:12:0,6,107,22,109,136
+chr21	19367520	chr21:19367520:M	ATATATATATATATATATATATA	<12.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:9,3,6:18:135,63,180,0,119,228	1/2:0,5,1:7:112,28,10,74,0,68	0/0:26,0,0:26:0,77,255,78,255,255
+chr21	19372104	chr21:19372104:M	AAAAAAAAAAAGAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17:38:206,0,255	0/0:31,2:33:0,62,255	0/1:15,18:33:232,0,176
+chr21	19372547	chr21:19372547:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:29:161,0,204	0/0:32,6:39:0,7,255	1/1:0,41:43:255,126,0
+chr21	19375706	chr21:19375706:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:55,0,3	0/1:2,1:5:24,0,19	.
+chr21	19400235	chr21:19400235:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:20:0,55,255	0/1:12,6:22:49,0,162	0/0:17,1:21:0,41,255
+chr21	19403322	chr21:19403322:M	ATCTATGTATCTATGTATCTATGTATCTATCTATGTATCTATCTATCTATCTATCTAT	<12.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:8,8:16:159,0,166	0/0:16,0:16:0,48,255	1/1:0,32:32:255,96,0
+chr21	19408203	chr21:19408203:M	ACACACACACACACACACACACACACACACACACA	<12.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,26,0:45:255,0,255,255,255,255	0/2:14,0,11:25:118,189,255,0,242,171	1/1:0,32,0:33:255,99,0,255,99,255
+chr21	19408262	chr21:19408262:M	TACATATACATATACATATACATATACATATA	<4.3>	.	.	Motif=TACATA	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:9,11:20:141,0,105	0/0:26,0:26:0,77,255
+chr21	19409697	chr21:19409697:M	ATATATATATATACATAAATTTATTTTATATATAATGGTATTATATTATATATAT	<28.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:7,5:12:55,0,89	0/0:13,0:14:0,41,248
+chr21	19439900	chr21:19439900:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,1:4:74,16,16,30,0,22	0/2:2,0,3:6:67,49,106,0,55,42	1/2:0,4,1:5:130,16,2,65,0,50
+chr21	19455460	chr21:19455460:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,2:19:0,19,255	0/1:11,11:24:139,0,122	0/0:24,3:28:0,28,255
+chr21	19459035	chr21:19459035:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:25:205,0,100	1/1:0,14:15:254,44,0	0/0:29,4:34:0,28,255
+chr21	19459199	chr21:19459199:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:20:0,54,255	0/1:10,8:21:155,0,213	0/0:17,0:18:0,54,255
+chr21	19460879	chr21:19460879:M	ATATATATATATATATATATATATA	<9.5>,<10.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:1,7,2,12:22:255,164,255,205,158,202,156,0,76,121	1/2:0,16,17,1:35:255,243,155,238,0,141,255,183,222,255	3/3:3,1,1,25:31:255,255,255,255,255,255,35,61,60,0
+chr21	19461588	chr21:19461588:M	CACACACACCACACACACATACACACACACACACACA	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,10:22:221,0,211	0/1:7,6:13:126,0,156	0/0:34,0:34:0,102,255
+chr21	19461624	chr21:19461624:M	AGAGAGAGAAAGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:7,12:19:239,0,117	0/1:7,12:20:234,0,115	0/0:38,0:38:0,114,255
+chr21	19463455	chr21:19463455:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,47:49:255,127,0	1/1:0,30:34:255,99,0	0/1:13,24:40:255,0,118
+chr21	19463993	chr21:19463993:M	ATATATATATATATATATATATATATATA	<15.5>,<20.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,6,8:16:255,210,205,72,0,144	0/2:0,0,1:3:21,27,45,0,21,22	1/1:1,15,0:16:203,31,0,249,48,255
+chr21	19466458	chr21:19466458:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,5:5:88,88,88,15,15,0	0/0:2,0,0:2:0,6,56,6,39,34	1/2:0,3,6:9:160,86,77,51,0,26
+chr21	19472165	chr21:19472165:M	CACACACACACA	<4>,<5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,8:19:255,126,93,201,0,148	1/1:0,12,0:12:255,36,0,243,35,211	2/2:0,0,24:24:255,255,255,71,71,0
+chr21	19472176	chr21:19472176:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<19.5>,<20.5>,<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:2,8,4,1,0:16:255,0,31,37,9,67,163,35,90,192,255,48,93,219,255	2/4:0,0,4,0,3:9:179,103,112,51,63,45,72,67,32,58,82,44,0,43,69	1/3:0,9,2,7,0:18:255,157,109,166,58,113,209,0,81,157,255,83,146,205,255
+chr21	19473227	chr21:19473227:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,13:28:255,255,255,241,0,255	1/2:0,15,10:25:255,255,212,255,0,255	1/1:0,45,0:45:255,133,0,255,135,255
+chr21	19486176	chr21:19486176:M	GTGTGTTTGTGTGTGTGTGTGTGTGTGTTGTGTATGTGT	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,24:43:255,0,235	0/0:20,0:20:0,59,255	0/1:18,11:30:116,0,254
+chr21	19488881	chr21:19488881:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:22:255,63,0,255,63,255	1/2:0,7,10:20:255,247,228,201,0,171	0/1:11,8,0:22:178,0,255,211,255,255
+chr21	19491193	chr21:19491193:M	TCTCTCTCTCTCTCTCTCTTCTC	<10.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,19:19:255,56,0	0/1:19,14:34:173,0,255
+chr21	19497486	chr21:19497486:M	AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0:12:0,34,183	0/1:7,13:24:160,0,41	0/0:14,1:17:0,30,210
+chr21	19501510	chr21:19501510:M	ATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,2:42:0,77,255	0/1:22,17:41:255,0,255	0/0:46,0:46:0,138,255
+chr21	19503371	chr21:19503371:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:1,27:28:255,64,0	1/1:0,34:34:255,100,0
+chr21	19503569	chr21:19503569:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,26,26:53:255,255,255,255,0,255	1/2:0,23,18:42:255,255,255,255,0,255	0/1:18,21,0:39:255,0,223,255,255,255
+chr21	19504846	chr21:19504846:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,3,4:7:106,125,189,71,106,96,53,80,0,66	1/2:0,21,7,0:31:255,148,164,255,0,255,255,221,255,255	0/3:3,0,1,9:13:122,158,255,140,255,255,0,63,27,27
+chr21	19509772	chr21:19509772:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,15:37:255,0,255	0/1:15,13:33:255,0,255	0/0:35,0:36:0,108,255
+chr21	19518955	chr21:19518955:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,28:29:255,87,0	0/1:11,15:29:255,0,221	0/1:16,16:33:255,0,255
+chr21	19524780	chr21:19524780:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,0,9:19:194,145,255,0,255,238	1/2:0,1,4:6:124,63,49,16,0,1	0/1:8,7,0:15:142,0,178,111,204,255
+chr21	19531621	chr21:19531621:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:17:201,0,4	1/1:3,23:27:255,27,0	0/0:21,1:23:0,50,255
+chr21	19533104	chr21:19533104:M	ACACACACACATACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,21:28:255,0,49	1/1:1,22:23:255,50,0	0/1:13,11:25:134,0,167
+chr21	19536416	chr21:19536416:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,2:47:0,102,255	0/0:35,2:39:0,79,255	0/1:22,18:41:205,0,255
+chr21	19536947	chr21:19536947:M	TATATATATATATATAT	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:28,0:31:0,61,179	0/0:8,0:8:0,16,46	0/1:7,12:22:27,0,10
+chr21	19543970	chr21:19543970:M	GTTTTTTGTTTGTTTTGTTTTTTTTTTGTTTTGTTTGTTTGTTTGTTT	<12.2>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:6,9:15:142,0,80	1/1:1,22:23:255,48,0	0/0:11,1:12:0,15,208
+chr21	19545826	chr21:19545826:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:4,0,103	1/1:0,6:7:94,17,0	0/0:9,0:10:0,29,156
+chr21	19546365	chr21:19546365:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	.	0/1:2,3:5:33,0,17	0/0:1,0:2:0,6,29
+chr21	19549187	chr21:19549187:M	TCTCTCTCTCTCTCTCTCTCTC	<7>,<9>,<10>	.	.	Motif=TC	GT:AD:DP:PL	0/2:13,7,12,1:33:238,99,255,0,142,223,157,142,146,247	1/2:0,20,7,0:30:255,145,77,255,0,255,255,84,255,255	0/3:7,0,1,10:20:86,127,255,77,255,230,0,91,75,44
+chr21	19549208	chr21:19549208:M	CACACACACACACACACACACACACACACACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,18:21:255,56,0	1/1:0,27:35:255,94,0	0/1:8,7:18:55,0,79
+chr21	19550359	chr21:19550359:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,13:29:154,0,210	0/1:19,13:32:133,0,238	0/0:16,2:18:0,17,252
+chr21	19551108	chr21:19551108:M	ATAGATAGGTAGGTAGGTAAATAGATTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<15.5>,<17.5>	.	.	Motif=ATAG	GT:AD:DP:PL	0/0:13,0,0:13:0,38,250,38,250,250	0/1:9,7,0:16:79,0,116,124,137,255	0/2:11,0,6:17:62,110,255,0,174,155
+chr21	19553279	chr21:19553279:M	ACACACACACATACACACACATACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:32:255,93,0	0/1:22,11:33:195,0,255	1/1:0,22:24:255,66,0
+chr21	19556560	chr21:19556560:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,42:44:255,93,0	0/1:20,11:32:101,0,255	1/1:0,29:29:255,85,0
+chr21	19563350	chr21:19563350:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:26:255,62,0	0/1:13,18:33:225,0,138	1/1:2,27:29:255,49,0
+chr21	19572358	chr21:19572358:M	CTCTCTCTCTTTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTC	<33.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:13,0:14:0,42,255	0/1:5,3:10:75,0,103	0/0:13,0:13:0,39,255
+chr21	19572418	chr21:19572418:M	CACACACACACACACACACACACACACACACACACACACACACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,2,9:11:254,122,92,33,5,0	2/2:0,0,8:8:192,124,102,24,22,0	1/2:0,7,3:11:242,40,19,90,0,60
+chr21	19574283	chr21:19574283:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/1:7,4:11:37,0,91	0/0:22,0:22:0,65,255
+chr21	19575396	chr21:19575396:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:20,9:29:70,0,255	0/0:38,0:39:0,114,255
+chr21	19577467	chr21:19577467:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:22:255,46,0	0/1:3,9:21:150,0,6	1/1:3,24:29:255,21,0
+chr21	19579446	chr21:19579446:M	TATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:22,0:24:0,71,255	0/1:5,7:12:160,0,104	0/0:14,0:14:0,42,255
+chr21	19582403	chr21:19582403:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:13,22:38:255,0,135	0/0:25,1:27:0,61,255
+chr21	19595617	chr21:19595617:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAGAAAAGAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,10:24:59,0,19	0/0:18,1:24:0,39,168	0/1:18,7:36:12,0,112
+chr21	19630647	chr21:19630647:M	GAGAGAGAGAGAGA	<9>	.	.	Motif=GA	GT:AD:DP:PL	0/1:12,16:28:255,0,251	0/1:8,16:25:255,0,149	0/1:14,14:28:255,0,255
+chr21	19632074	chr21:19632074:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<11>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:11,11:22:148,0,148	0/0:13,0:13:0,38,236	0/1:15,9:24:98,0,212
+chr21	19634033	chr21:19634033:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:200,0,171	0/1:15,9:24:87,0,192	0/1:23,15:38:159,0,255
+chr21	19634255	chr21:19634255:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,0,15:30:198,242,255,0,255,189	0/1:13,22,1:36:255,0,255,255,213,255	0/2:13,2,17:32:242,230,255,0,201,148
+chr21	19640047	chr21:19640047:M	TTTATGTATTTATGTATGTATGTATATATGTATGTATGTATGTATTTATTTATTTATTTATTTATTTATTT	<18.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:2,6:8:91,0,14	0/0:2,0:2:0,6,36	0/1:7,3:10:26,0,100
+chr21	19642719	chr21:19642719:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:119,20,0	0/1:1,2:5:24,0,9	0/0:2,0:2:0,6,35
+chr21	19661574	chr21:19661574:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:2,29:31:255,56,0	1/1:1,33:36:255,87,0
+chr21	19664497	chr21:19664497:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,9:22:106,0,135	0/1:14,11:27:109,0,180	0/0:21,0:23:0,65,255
+chr21	19672721	chr21:19672721:M	AAAAAAAAAAAACAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,9:32:74,0,255	0/1:16,14:32:153,0,216	0/0:36,1:38:0,93,255
+chr21	19672790	chr21:19672790:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,2:38:0,75,255	0/0:34,1:37:0,91,255	0/1:11,7:18:74,0,146
+chr21	19674852	chr21:19674852:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:29:255,0,122	0/0:33,2:35:0,67,255	0/1:23,24:47:255,0,255
+chr21	19689224	chr21:19689224:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<13.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,18:33:255,255,235,200,0,170	0/1:13,15,0:30:174,0,162,219,242,255	1/2:0,16,16:32:255,255,194,242,0,194
+chr21	19690717	chr21:19690717:M	TCCTTTCCTTT	<1.6>	.	.	Motif=TCCTT	GT:AD:DP:PL	0/0:44,0:45:0,124,255	0/0:44,0:44:0,132,255	0/1:18,26:45:255,0,255
+chr21	19692886	chr21:19692886:M	TTTTGTTTTTTGTTTTGTTTTTGTTTTTGTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,99,0	0/1:15,16:31:255,0,255	1/1:0,28:28:255,84,0
+chr21	19701141	chr21:19701141:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,3,1:4:111,108,106,17,17,5,51,51,0,39	1/1:0,1,0,0:1:31,3,0,30,3,29,31,3,29,31	1/3:0,3,0,3:8:170,79,67,127,46,114,90,0,77,80
+chr21	19702654	chr21:19702654:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:11:147,15,0	0/1:5,10:17:118,0,46	0/1:2,7:11:111,0,2
+chr21	19703633	chr21:19703633:M	ACACACACACACACACACACACAACATGCACACACACACACACA	<21>,<23>,<27>	.	.	Motif=AC	GT:AD:DP:PL	2/3:1,0,22,11:34:255,255,255,255,255,237,255,255,0,255	0/3:13,0,0,7:21:155,193,255,193,255,255,0,228,228,255	1/2:0,14,12,0:27:255,215,255,253,0,255,255,255,255,255
+chr21	19716793	chr21:19716793:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:23:0,50,255	0/0:21,1:22:0,47,255	0/1:20,16:37:185,0,245
+chr21	19732112	chr21:19732112:M	TATAGTATATATATATATGTGTATATGTCTATATATATATATATATATA	<23.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,7:17:80,0,136	0/1:4,1:5:3,0,55	0/1:9,10:19:126,0,107
+chr21	19737378	chr21:19737378:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,13,7:20:255,255,255,124,125,66,195,231,0,174	1/3:0,25,2,3:32:255,105,56,255,39,255,255,0,255,255	2/2:0,0,19,2:21:255,255,255,61,63,0,255,255,27,255
+chr21	19753579	chr21:19753579:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,10:30:255,186,101,255,0,255	1/2:1,17,11:30:255,188,122,237,0,227	2/2:1,3,32:36:255,255,255,70,39,0
+chr21	19758802	chr21:19758802:M	ACACACACACACACACACGCACACACACACAATACACACA	<19>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,12,0:22:166,0,128,226,164,255	0/1:14,17,0:31:216,0,162,255,213,255	0/2:17,1,18:36:232,255,255,0,251,223
+chr21	19761215	chr21:19761215:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,20:44:255,0,255	1/1:0,42:43:255,126,0	0/0:49,0:49:0,145,255
+chr21	19761608	chr21:19761608:M	TGTGTGTGTGTATGTGTGTGTGTGTATGTGTGTGTGTGTGTGTATGTGTGTGTG	<28>,<29>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,7,16:24:255,255,200,98,0,50	2/2:0,2,15:17:255,254,208,45,17,0	1/2:0,11,3:14:219,48,8,148,0,139
+chr21	19767479	chr21:19767479:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,19:39:239,0,248	1/1:1,23:25:255,55,0	0/0:31,0:31:0,91,255
+chr21	19772465	chr21:19772465:M	AAACAAACAAACAAACAAACAAACAAAAAACA	<9>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:22,12:34:118,0,255	0/0:27,0:27:0,80,255
+chr21	19773283	chr21:19773283:M	TATATATATATATATATATACACACATATATATACACATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	.	.	1/1:0,4:4:47,11,0
+chr21	19773353	chr21:19773353:M	TATATATATATATATATATATATATATATATATATATATATATAT	<11.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:1,0,0:5:0,6,52,6,52,52	0/0:0,0,0:1:0,3,22,3,22,22	1/2:0,10,4:16:255,48,18,255,0,255
+chr21	19774104	chr21:19774104:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:0,43:45:255,131,0	1/1:0,45:46:255,135,0
+chr21	19775100	chr21:19775100:M	CACACACACACACACACACACACACACACACACACACA	<18>,<20>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/3:1,12,2,7:25:255,167,161,255,139,255,167,0,255,255	3/3:0,0,0,27:29:255,255,255,255,255,255,87,87,87,0	1/2:0,14,13,0:28:255,202,255,227,0,255,255,255,255,255
+chr21	19789077	chr21:19789077:M	ACCCCCACCCCC	<2.2>	.	.	Motif=ACCCCC	GT:AD:DP:PL	0/1:19,13:32:239,0,255	0/0:24,0:24:0,72,255	0/1:20,9:29:145,0,255
+chr21	19790838	chr21:19790838:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:144,15,0	.	1/1:0,1:4:31,4,0
+chr21	19801794	chr21:19801794:M	TTTGTTTGCTTGTTTGTTTGTTTGTTTTTTG	<8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:18,11:29:207,0,255	1/1:0,35:35:255,105,0	0/0:30,0:30:0,90,255
+chr21	19804190	chr21:19804190:M	TGTGTGTGTGTGTGTGTG	<8>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,7:21:28,0,113	0/1:5,6:11:42,0,30	0/0:35,0:36:0,99,255
+chr21	19804207	chr21:19804207:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<15>,<16>	.	.	Motif=GA	GT:AD:DP:PL	0/2:15,2,17:34:255,208,255,0,255,255	1/2:0,5,16:21:255,219,158,70,0,9	0/1:16,12,0:31:221,0,255,171,255,255
+chr21	19804942	chr21:19804942:M	TGTTTTTTTTGTTGTTTGTTTTTTTGTTTTTTTTTTGTTTTGTTTTGTTTTG	<9.2>,<10.8>,<11>	.	.	Motif=TGTTT	GT:AD:DP:PL	1/2:0,9,9,1:19:255,239,216,255,0,242,255,140,254,255	1/1:0,14,0,0:14:255,42,0,255,42,255,255,42,255,255	2/3:0,0,4,5:9:251,252,254,90,90,64,70,71,0,45
+chr21	19806519	chr21:19806519:M	AAAAAAAAAAAAA	<10>,<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,25,1,23:49:255,255,255,255,255,255,255,0,255,255	1/1:0,49,1,0:50:255,150,0,255,129,255,255,147,255,255	2/3:0,0,19,14:33:255,255,255,222,255,165,255,255,0,255
+chr21	19807245	chr21:19807245:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:26:135,151,255,0,234,180	2/2:1,5,24:30:255,255,255,70,1,0	0/1:10,9,3:26:226,0,228,138,139,255
+chr21	19816728	chr21:19816728:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,17,23:41:255,255,255,255,0,214	1/1:0,34,0:34:255,100,0,255,100,255	2/2:0,1,41:43:255,255,255,126,108,0
+chr21	19821060	chr21:19821060:M	TGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,11:24:182,0,203	0/0:10,0:10:0,30,223	1/1:0,27:28:255,81,0
+chr21	19821070	chr21:19821070:M	TATATATATATATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:4,14:22:255,0,95	0/0:6,0:8:0,24,186	1/1:0,26:29:255,70,0
+chr21	19823974	chr21:19823974:M	TTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,2,4:19:59,30,255,0,255,255	1/2:0,3,9:12:251,131,99,44,0,10	0/0:30,0,0:33:0,98,255,98,255,255
+chr21	19829448	chr21:19829448:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,0:51:0,150,255	0/0:43,0:43:0,126,255	0/1:19,25:44:255,0,218
+chr21	19832180	chr21:19832180:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:44:0,111,255	0/0:35,3:38:0,58,255	0/1:23,23:47:255,0,255
+chr21	19832679	chr21:19832679:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/0:30,0:30:0,88,255	0/1:26,23:49:255,0,255
+chr21	19836593	chr21:19836593:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:17:255,30,0	1/1:0,28:29:255,85,0	0/1:16,15:31:183,0,201
+chr21	19846516	chr21:19846516:M	CTTTTCTTTTCTTTTTTTTTTTTCCTTTT	<6>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:26,0:26:0,77,255	0/1:10,7:17:97,0,161
+chr21	19846696	chr21:19846696:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,1:7:0,2,91	0/0:10,0:11:0,32,179	0/1:10,7:18:71,0,133
+chr21	19857142	chr21:19857142:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:92,0,101	0/0:16,1:18:0,36,255	1/1:1,9:10:138,12,0
+chr21	19861089	chr21:19861089:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:255,0,255	1/1:0,22:23:255,69,0	0/0:36,0:37:0,111,255
+chr21	19867626	chr21:19867626:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/1:24,29:53:255,0,255	1/1:0,44:45:255,132,0	0/1:17,20:37:255,0,211
+chr21	19868263	chr21:19868263:M	CTCTCTGTCTCTCTCTCTCTCTCTCTCTC	<11.5>,<12.5>	.	.	Motif=CT	GT:AD:DP:PL	0/2:10,1,14:29:255,206,255,0,255,234	2/2:0,2,22:24:255,255,255,72,38,0	0/1:18,13,0:32:255,0,255,204,255,255
+chr21	19868291	chr21:19868291:M	CACACACACACACACACACACAC	<12.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:18,6,6:32:93,91,242,0,148,255	1/2:0,11,11:25:255,255,255,125,0,255	0/2:17,0,0:27:72,88,224,0,190,255
+chr21	19872748	chr21:19872748:M	AATAAATAAATAAATAAATAAATAAATAAATAAAT	<7.8>,<10.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:18,13,0:31:162,0,255,250,255,255	1/1:0,32,0:32:255,94,0,255,96,255	0/2:10,0,11:21:255,255,255,0,186,231
+chr21	19884356	chr21:19884356:M	GTGTGTGTGTGTGTGTGTCTGTGTGTCTGTGTCTGTGTGTCTTGTGTATGTGTG	<28>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,9:20:111,0,149	1/1:0,21:21:255,62,0	0/1:14,4:18:21,0,205
+chr21	19885166	chr21:19885166:M	AAAAAAAAAAAATAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:45,0:45:0,132,255	0/1:21,9:30:77,0,255
+chr21	19892061	chr21:19892061:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,8:19:93,0,150	1/1:1,19:20:255,41,0	0/1:10,9:20:116,0,124
+chr21	19898883	chr21:19898883:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	<10>,<11>	.	.	Motif=TC	GT:AD:DP:PL	0/1:7,11,0:19:255,0,153,193,179,255	1/1:0,21,0:23:255,68,0,255,64,255	0/2:11,1,5:17:97,69,255,0,255,255
+chr21	19907271	chr21:19907271:M	AAAAAAAAAAAAAAAAAAAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:84,15,0	.	0/1:1,2:3:24,0,8
+chr21	19908336	chr21:19908336:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:3,22:29:255,31,0	1/1:3,36:42:255,68,0
+chr21	19913097	chr21:19913097:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:24:203,0,94	1/1:0,26:28:255,81,0	0/0:26,4:31:0,19,255
+chr21	19923167	chr21:19923167:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,11:28:131,0,242	0/0:8,0:8:0,24,144	1/1:0,19:19:255,56,0
+chr21	19923189	chr21:19923189:M	ATATATATATTTTATATATAATTATATATTAATGATATTAATATATATATATATATATAT	<29>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:9:172,27,0	1/1:0,2:2:35,6,0	1/1:0,7:7:130,21,0
+chr21	19927431	chr21:19927431:M	AAAGAAAGAAAAGAAAGAAAGA	<4.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:23,9:32:12,0,163	0/0:27,0:27:0,71,255	0/1:14,5:19:3,0,99
+chr21	19927503	chr21:19927503:M	GAAAGGAAGAAAGAAAAGACAAGAAAGAAAGACAAGAAA	<10>	.	.	Motif=GAAA	GT:AD:DP:PL	0/0:25,0:25:0,37,95	0/0:32,0:34:0,49,125	0/1:16,14:34:5,0,21
+chr21	19927539	chr21:19927539:M	AAAATAAAAAAAGAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:30,0:30:0,88,255	0/1:13,11:24:135,0,172
+chr21	19930365	chr21:19930365:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:29:173,0,191	1/1:1,35:42:255,103,0	0/1:12,27:43:255,0,91
+chr21	19932510	chr21:19932510:M	TGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/0:25,0:26:0,68,255	0/1:25,14:42:255,0,255
+chr21	19932524	chr21:19932524:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,16:21:210,33,0	1/1:4,20:25:210,20,0	1/1:4,18:24:198,16,0
+chr21	19945535	chr21:19945535:M	TGTTTGTTTGT	<1.8>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:38,0:38:0,111,255	0/0:34,0:34:0,99,255	0/1:18,18:36:192,0,193
+chr21	19954852	chr21:19954852:M	TTTATTTTATTTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<12.5>,<12.8>	.	.	Motif=TTTA	GT:AD:DP:PL	2/2:0,0,18:18:255,255,255,53,54,0	2/2:0,0,7:7:128,138,152,21,21,0	1/2:0,9,9:18:255,154,141,189,0,141
+chr21	19955308	chr21:19955308:M	ATATATATATGTATTTATGTATACATATATATATTTATGTATACATACATATGTATTTATGTGTATATATAT	<2.5>	.	.	Motif=ATAT	GT:AD:DP:PL	0/1:7,12:22:255,0,102	1/1:1,7:8:255,1,0	0/1:10,8:18:255,0,175
+chr21	19970267	chr21:19970267:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<10>,<13>,<14>	.	.	Motif=CCTT	GT:AD:DP:PL	0/2:15,0,6,0:21:51,112,255,0,255,220,96,255,255,255	0/3:6,0,0,12:18:255,255,255,208,255,255,0,158,104,121	1/2:0,9,13,0:23:255,235,255,243,0,209,255,231,244,255
+chr21	19970328	chr21:19970328:M	TTCTTTTCTTTTTTTTTTTTTTTTTTCT	<5.4>	.	.	Motif=TTCTT	GT:AD:DP:PL	1/1:0,4:5:73,14,0	1/1:0,2:3:43,9,0	1/1:0,5:5:75,14,0
+chr21	19972118	chr21:19972118:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:113,15,0	1/1:0,6:6:180,18,0	1/1:1,6:11:203,3,0
+chr21	19976356	chr21:19976356:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGGAAAAGAAAAAGAGAAAAAGAAAAAAAA	<54>,<55>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,2:13:0,33,255,2,197,162	0/2:7,0,3:10:23,44,211,0,117,90	0/1:5,4,0:9:96,0,113,70,86,132
+chr21	19977966	chr21:19977966:M	AAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,20:28:255,255,255,103,0,29	1/2:0,7,17:25:255,255,218,119,0,48	0/2:5,2,11:19:255,155,255,0,93,85
+chr21	19983891	chr21:19983891:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	<10.8>,<11.8>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:12,8,7:27:97,0,175,21,61,72	1/2:2,8,7:17:159,35,44,59,0,36	0/2:14,0,9:23:31,72,255,0,140,81
+chr21	19983947	chr21:19983947:M	CATACATACATACATACATA	<6>,<7>	.	.	Motif=CATA	GT:AD:DP:PL	1/2:0,18,24:49:255,213,159,100,0,132	0/1:12,19,0:33:134,0,74,176,162,255	1/2:3,14,19:36:255,190,129,99,0,102
+chr21	19985279	chr21:19985279:M	TGTGTGTGTGTGTGTGTGTGCGCATGTGGTGTGTGTCTATGTGTGTGTGT	<24>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,19:19:255,56,0	1/1:0,21:22:255,64,0
+chr21	19986791	chr21:19986791:M	TTTTTTTTGTTTTTTTTTTT	<21>,<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,4,12:16:255,255,255,190,190,144,65,64,0,17	3/3:0,0,1,24:25:255,255,255,255,255,255,75,75,57,0	1/2:1,18,8,0:27:255,184,138,255,0,255,255,123,255,255
+chr21	19990678	chr21:19990678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,43:45:255,96,0	1/1:2,31:33:255,62,0	1/1:1,39:41:255,92,0
+chr21	19992034	chr21:19992034:M	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<12.2>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:13,8:21:92,0,189	0/1:3,0:5:7,0,40	0/1:12,8:20:91,0,167
+chr21	20008399	chr21:20008399:M	CACACACACACACACACACACACACAC	<15.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:3,20,0:24:255,0,10,255,77,255	0/1:2,15,0:20:255,0,1,255,58,255	1/2:1,13,16:33:255,255,255,255,0,255
+chr21	20012563	chr21:20012563:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:0,23:23:255,67,0	1/1:1,34:36:255,88,0
+chr21	20018873	chr21:20018873:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,14:25:194,0,112	1/1:0,29:32:255,93,0	0/1:5,13:19:188,0,35
+chr21	20034153	chr21:20034153:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:22:135,0,136	0/0:22,2:25:0,38,255	0/1:5,6:14:70,0,78
+chr21	20034579	chr21:20034579:M	TATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTCTATCT	<13>,<19.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,8,5:13:255,95,107,208,0,194	1/1:0,17,0:17:255,51,0,255,51,255	1/2:0,8,6:14:255,111,132,210,0,192
+chr21	20039938	chr21:20039938:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,79,0	1/1:1,30:31:255,73,0	1/1:2,28:30:255,52,0
+chr21	20044416	chr21:20044416:M	TTTTTTTTTTTTTT	<15>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,13,1,3:19:255,72,46,247,62,255,230,0,227,255	1/1:1,23,1,0:25:255,55,0,255,56,255,255,75,255,255	2/3:0,2,12,7:21:255,255,255,180,149,142,255,179,0,255
+chr21	20047228	chr21:20047228:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,14:31:176,0,196	0/0:31,2:35:0,67,255	0/1:17,19:38:236,0,200
+chr21	20047917	chr21:20047917:M	ACAACAACAACAACAACAACAA	<6.3>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:14,23:37:255,0,162	0/0:35,0:36:0,97,255	0/1:20,22:42:255,0,253
+chr21	20052105	chr21:20052105:M	TTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6,0:26:107,0,255,115,255,255	1/2:0,5,3:9:244,52,26,95,0,71	0/1:16,3,0:20:43,0,255,53,255,255
+chr21	20052179	chr21:20052179:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13:26:176,0,147	1/1:2,22:24:255,35,0	0/1:17,11:30:131,0,222
+chr21	20056199	chr21:20056199:M	GTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<8.8>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:1,25:26:255,58,0	1/1:0,24:24:255,71,0
+chr21	20060660	chr21:20060660:M	AAAAGAAAAGAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,30:31:255,91,0	1/1:1,23:24:255,52,0
+chr21	20069438	chr21:20069438:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:1,34:35:255,85,0	1/1:0,38:38:255,112,0
+chr21	20075680	chr21:20075680:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:2,26:28:255,47,0	1/1:3,27:31:255,37,0
+chr21	20083115	chr21:20083115:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:21:0,62,255	0/1:14,10:25:100,0,180	0/1:17,11:30:109,0,235
+chr21	20089392	chr21:20089392:M	AAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,60,0	1/1:0,11:14:255,41,0	1/1:0,15:17:255,51,0
+chr21	20105937	chr21:20105937:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,7:9:216,121,97,26,0,1	1/2:0,4,2:7:173,34,13,78,0,60	1/2:0,4,5:9:239,86,60,69,0,43
+chr21	20106411	chr21:20106411:M	TCATCATTATCATTATCAATCATCATCA	<11.3>	.	.	Motif=TCA	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,24:24:255,72,0	1/1:0,28:28:255,84,0
+chr21	20110850	chr21:20110850:M	TGTTTGTTTGTTTGTTTGTTT	<6.2>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,35:35:255,103,0	1/1:0,36:36:255,106,0
+chr21	20111612	chr21:20111612:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,19,5:26:255,95,24,255,0,255	1/2:0,10,10:20:255,167,109,167,0,110	2/2:0,1,20:22:255,255,255,62,44,0
+chr21	20115343	chr21:20115343:M	TTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:37:255,110,0	1/1:0,35:37:255,110,0	1/1:0,27:28:255,84,0
+chr21	20116311	chr21:20116311:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,35:37:255,105,0	1/1:0,47:50:255,146,0
+chr21	20119173	chr21:20119173:M	TTTTTTTTTTTTTTTATTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:2,21:23:255,33,0	1/1:1,21:26:255,57,0
+chr21	20127279	chr21:20127279:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,33:33:255,99,0	1/1:0,23:24:255,72,0
+chr21	20129453	chr21:20129453:M	TTCTTCTTCTTC	<3>	.	.	Motif=TTC	GT:AD:DP:PL	1/1:0,50:50:255,148,0	1/1:0,34:34:255,100,0	1/1:0,40:40:255,118,0
+chr21	20133811	chr21:20133811:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,21:25:255,54,0	1/1:1,16:19:255,38,0	1/1:1,25:28:255,64,0
+chr21	20134855	chr21:20134855:M	ACACGACACACACACACGCACACACACACACACACACACA	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,27:28:255,81,0	1/1:0,23:26:255,72,0
+chr21	20141171	chr21:20141171:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:221,24,0	0/1:1,4:6:91,0,36	1/1:0,4:4:110,12,0
+chr21	20142639	chr21:20142639:M	TTATTATTATTATTATTATTATTATTATTATTACTATTATT	<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10:10:190,30,0	1/1:0,6:7:117,20,0	1/1:0,11:11:204,32,0
+chr21	20154733	chr21:20154733:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:13:179,19,0	0/1:3,14:19:195,0,6	1/1:2,22:26:255,40,0
+chr21	20155732	chr21:20155732:M	CCCCCCCCCCCCC	<14>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:2,22:24:255,36,0	1/1:2,19:22:255,29,0
+chr21	20161968	chr21:20161968:M	TATATATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,28:33:255,78,0	1/1:0,19:21:255,62,0	1/1:1,35:37:255,91,0
+chr21	20162432	chr21:20162432:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:67,12,0	1/1:0,0:2:13,3,0	0/1:1,2:3:24,0,8
+chr21	20169966	chr21:20169966:M	ACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:2,29:31:255,57,0	1/1:0,22:22:255,64,0
+chr21	20173559	chr21:20173559:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,7:10:191,106,97,13,0,18	1/2:0,3,9:12:255,151,118,43,0,16	2/2:0,0,10:10:255,203,176,30,29,0
+chr21	20192660	chr21:20192660:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,20:22:255,65,0	1/1:0,32:38:255,102,0
+chr21	20197845	chr21:20197845:M	ACACAGACACACACACACACACACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,45,0	1/1:0,18:21:255,62,0	1/1:0,26:26:255,78,0
+chr21	20199490	chr21:20199490:M	TTTTTTTTTTTAATGTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,23:23:255,69,0	1/1:0,20:20:255,60,0
+chr21	20204340	chr21:20204340:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:3,46:50:255,94,0	1/1:3,38:43:255,71,0
+chr21	20216880	chr21:20216880:M	AGAGGAGAGAGAAAAAGAAGAGAGAAGAAAGAGGAGAGAGA	<6>	.	.	Motif=AG	GT:AD:DP:PL	0/1:23,5:28:35,0,255	0/1:26,9:35:127,0,255	0/0:33,4:37:0,13,255
+chr21	20222867	chr21:20222867:M	TTTTTCTTTTCTTTTTTTTTTTCTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:139,12,0	1/1:0,10:10:166,29,0	1/1:0,12:12:205,35,0
+chr21	20229545	chr21:20229545:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<12.6>,<13.6>,<14.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/3:0,7,0,4:11:226,110,89,190,76,179,133,0,132,179	2/3:0,0,4,4:8:219,180,168,72,71,49,72,61,0,49	1/2:0,6,5,0:11:231,93,61,95,0,80,204,79,111,243
+chr21	20230494	chr21:20230494:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:3,10,3,0:16:134,7,47,127,0,254,171,59,255,255	1/3:0,11,2,5:19:255,129,117,237,49,255,184,0,255,255	0/2:2,0,6,2:10:95,118,204,0,29,5,51,101,0,97
+chr21	20244101	chr21:20244101:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6,2:10:91,0,4,49,1,98	1/2:0,5,7:13:255,125,89,65,0,41	1/2:0,9,4:13:222,64,27,119,0,107
+chr21	20254488	chr21:20254488:M	AAAAAAGAAAAAAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAAAAAAGAAAAAA	<57>,<58>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,11:17:160,178,255,0,112,64	0/1:10,8,0:18:173,0,231,140,176,255	1/2:0,5,8:13:253,126,111,91,0,55
+chr21	20256071	chr21:20256071:M	ACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,9,0:18:255,156,104,150,0,99,255,156,150,255	1/3:1,9,0,6:17:255,148,154,255,180,255,232,0,148,236	2/2:0,0,21,0:21:255,255,255,63,61,0,255,255,63,255
+chr21	20262640	chr21:20262640:M	TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT	<14.3>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:7,0:7:0,21,124	0/1:3,5:8:68,0,31
+chr21	20274542	chr21:20274542:M	GGAAGGAGGGAAGGAAGGACGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	<18.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,6:6:110,18,0	1/1:0,5:5:87,15,0	.
+chr21	20274922	chr21:20274922:M	ACACACACACACACACACACACACACACATACACA	<14.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:15,0,19:36:255,255,255,0,255,249	0/2:21,0,13:36:196,255,255,0,255,255	0/1:20,21,0:44:255,0,255,255,255,255
+chr21	20280929	chr21:20280929:M	TATATATATATATAAAAATGTCTATATATATATATATA	<20>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,17:33:245,0,185	0/1:6,4:10:42,0,77	0/0:18,0:18:0,53,255
+chr21	20286018	chr21:20286018:M	TTTTTTTTTTTTTTTTTCTTTTT	<21>,<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:2,0,17,0:19:255,255,255,19,55,0,255,255,51,255	2/2:0,2,20,0:22:255,255,255,64,30,0,255,255,65,255	1/3:1,8,2,5:16:255,66,119,177,101,210,199,0,104,220
+chr21	20291667	chr21:20291667:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,0,1	0/0:0,0:4:0,4,16	1/1:0,3:3:89,9,0
+chr21	20293211	chr21:20293211:M	ACACACACACACACACACACACAC	<16>,<17>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,9:23:194,151,255,0,255,255	0/1:13,8,0:22:174,0,255,144,255,255	1/2:0,13,12:25:255,211,140,229,0,159
+chr21	20296069	chr21:20296069:M	AAAAAAAAAAAAAAGAAAGAAAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,7,8:21:255,172,185,80,0,189	1/2:1,14,8:26:255,209,172,228,0,255	1/2:0,16,13:29:255,255,255,255,0,255
+chr21	20300407	chr21:20300407:M	ATATATATATATATATATATATATATATA	<6.5>,<8>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,9:18:255,143,96,132,0,82	1/2:0,7,4:12:255,62,32,112,0,81	1/1:0,19,0:24:255,69,0,255,43,255
+chr21	20301970	chr21:20301970:M	AAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:14:218,0,22	0/1:2,10:15:239,0,23	0/1:2,13:16:255,0,18
+chr21	20305495	chr21:20305495:M	TTATTATTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:18,25:43:255,0,222	0/1:17,22:39:255,0,194	0/1:18,23:41:255,0,217
+chr21	20308330	chr21:20308330:M	ACACACACACACACACACACACACACACA	<13.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,21:21:255,255,255,62,63,0	0/2:15,2,6:23:39,70,255,0,188,223	1/2:1,16,7:25:255,110,135,255,0,255
+chr21	20308357	chr21:20308357:M	CATGCGTGCACGCATGCATGCA	<6.5>	.	.	Motif=CATG	GT:AD:DP:PL	1/1:0,23:24:255,68,0	1/1:0,18:18:255,53,0	0/1:19,11:32:106,0,255
+chr21	20315482	chr21:20315482:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:41:255,118,0	1/1:0,30:32:255,93,0	0/1:15,12:27:143,0,198
+chr21	20318169	chr21:20318169:M	TATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,1:12:2,0,224	0/1:8,6:16:130,0,161	0/0:37,0:39:0,116,255
+chr21	20318188	chr21:20318188:M	ATACACACACACACACATACATACATACATACATA	<9.2>,<10.2>,<10.8>	.	.	Motif=ATAC	GT:AD:DP:PL	1/3:0,3,0,19:22:255,255,255,190,164,148,26,0,35,4	1/3:0,8,1,9:20:241,173,150,120,69,143,57,0,107,133	0/2:6,0,18,9:33:255,255,255,0,49,38,77,116,34,138
+chr21	20324165	chr21:20324165:M	TTTTTTCTTTTTTCTTCTCTTTTTTTTTTTTTT	<32>,<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8,0:16:99,0,99,144,145,255	0/1:14,9,0:24:97,0,172,163,239,255	1/2:0,12,10:23:255,255,224,210,0,255
+chr21	20326468	chr21:20326468:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:8:17,0,52	0/0:7,0:9:0,24,128	0/1:7,3:10:22,0,89
+chr21	20336857	chr21:20336857:M	ACACACACACACACGTACACACACACACACACACACACACACACACACACACA	<21.5>,<24.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,9,0,9:18:255,159,255,255,159,255,255,0,255,242	1/2:0,10,7,0:18:255,213,201,255,0,255,255,118,255,255	2/3:0,0,8,6:14:255,255,255,87,104,63,139,140,0,98
+chr21	20340932	chr21:20340932:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,14:32:188,0,178	0/1:13,18:33:240,0,132	0/1:23,14:44:171,0,255
+chr21	20344582	chr21:20344582:M	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTAT	<6.6>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,20:20:255,60,0	1/1:0,23:25:255,75,0
+chr21	20345787	chr21:20345787:M	ACACACACACACACACACACACACACACA	<13.5>,<18.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/4:0,14,0,0,4:19:255,114,70,255,112,255,255,72,255,255,255,0,255,255,255	1/3:0,11,0,8,0:21:255,231,196,255,127,255,198,0,255,255,255,139,255,255,255	2/4:0,0,7,1,6:15:255,255,255,170,170,140,225,225,91,184,209,209,0,117,184
+chr21	20351847	chr21:20351847:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,4,13:32:148,163,255,0,163,229	2/2:1,0,27:29:255,255,255,67,84,0	0/1:16,14,0:30:167,0,203,251,245,255
+chr21	20353330	chr21:20353330:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:20:0,38,255	0/0:23,0:24:0,70,255	0/1:13,11:25:126,0,153
+chr21	20354998	chr21:20354998:M	CACACACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,16:31:224,0,200	1/1:0,36:36:255,106,0	0/0:40,0:40:0,118,255
+chr21	20360344	chr21:20360344:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:16:0,44,255	0/0:21,2:27:0,41,255	0/1:14,7:24:53,0,207
+chr21	20365894	chr21:20365894:M	TTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,17,0:18:255,35,0,255,54,255	1/1:0,16,0:21:255,57,0,255,59,255	1/2:2,10,8:22:255,169,191,133,0,255
+chr21	20367038	chr21:20367038:M	TTTTCTTTTCTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:44,2:47:0,101,255	0/0:37,1:38:0,94,255	0/1:18,19:37:241,0,220
+chr21	20367366	chr21:20367366:M	TTTTCTTTTTTCTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,35:35:255,103,0	1/1:0,39:39:255,115,0
+chr21	20371170	chr21:20371170:M	AAAAAAAAAAAAAAAAAA	<14>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27,0:28:255,81,0,255,81,255	1/1:0,32,0:33:255,99,0,255,99,255	1/2:0,17,11:31:255,193,228,255,0,255
+chr21	20374052	chr21:20374052:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:1,30:31:255,73,0	0/1:18,10:30:97,0,253
+chr21	20374840	chr21:20374840:M	AAAAAAAAAAAAAGAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,12:19:162,0,54	0/1:6,8:16:99,0,65	1/1:0,17:17:255,50,0
+chr21	20377229	chr21:20377229:M	ATATATATATATATATATATATATATATATATCATATATAGATATGGTATATATA	<28.5>,<30.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,6,0:11:81,0,34,99,64,255	0/0:0,0,0:1:0,3,12,3,13,14	2/2:0,0,3:5:118,105,100,15,12,0
+chr21	20377292	chr21:20377292:M	TCTATCTATCTATCCATCTATCTATCTATCTATCTATC	<8.5>	.	.	Motif=TCTA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,19:19:255,56,0	1/1:0,17:17:255,50,0
+chr21	20381138	chr21:20381138:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAACAAATA	<12.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,14:14:255,41,0	1/1:0,9:9:163,26,0	0/1:17,10:27:107,0,238
+chr21	20381646	chr21:20381646:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:219,30,0	1/1:1,7:10:103,1,0	1/1:1,9:11:153,14,0
+chr21	20391009	chr21:20391009:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:28:0,63,255	0/0:20,0:23:0,67,255	0/1:18,15:34:181,0,224
+chr21	20393082	chr21:20393082:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:24:255,45,0	1/1:2,19:22:255,11,0	0/1:21,8:30:138,0,255
+chr21	20396019	chr21:20396019:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,11:40:171,0,255	0/1:19,28:47:255,0,255	0/0:32,0:34:0,99,255
+chr21	20398635	chr21:20398635:M	ATATATATATATATATATA	<8.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,27:28:255,255,255,82,84,0	2/2:1,0,21:22:255,255,255,47,63,0	1/2:2,19,15:36:255,238,255,255,0,255
+chr21	20402917	chr21:20402917:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,49:51:255,113,0	1/1:4,37:41:255,49,0	1/1:1,43:44:255,111,0
+chr21	20405735	chr21:20405735:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,49:50:255,129,0	1/1:0,52:52:255,154,0
+chr21	20423055	chr21:20423055:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:34:255,98,0	1/1:4,23:29:255,16,0	1/1:1,22:26:255,58,0
+chr21	20430762	chr21:20430762:M	TATATATATACATATATATATATACACATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,10:22:39,0,243	0/0:0,0:1:0,0,0	0/1:5,3:8:8,0,103
+chr21	20430814	chr21:20430814:M	TATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,10:11:88,2,0	0/0:1,0:1:0,3,28	0/1:1,3:4:24,0,16
+chr21	20430941	chr21:20430941:M	ATATATAGTCATATATATGTAACATATATACTCATATATATAACATATATAGTCATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,10:26:47,0,255	0/0:8,0:9:0,24,213	0/0:16,3:20:0,21,255
+chr21	20435496	chr21:20435496:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:52,0,2	0/1:0,2:3:23,0,3	0/1:1,2:3:24,0,8
+chr21	20440482	chr21:20440482:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,22:35:255,0,133	1/1:0,30:32:255,93,0	0/1:15,16:31:192,0,175
+chr21	20441660	chr21:20441660:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,15:19:217,0,1	0/1:10,10:22:116,0,116	0/1:8,8:17:101,0,91
+chr21	20445754	chr21:20445754:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,12:22:158,0,96	0/1:15,9:25:79,0,190	0/1:11,9:22:103,0,137
+chr21	20449355	chr21:20449355:M	ACACACACACACACACACACACACACACACACACACATACAC	<17>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,9,15:24:255,208,139,127,0,56	1/2:0,12,10:25:255,137,64,194,0,125	1/2:0,7,20:28:255,255,198,90,0,18
+chr21	20449540	chr21:20449540:M	ATATATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,35:38:255,109,0	1/1:0,20:21:255,61,0	1/1:1,37:41:255,99,0
+chr21	20449926	chr21:20449926:M	TATATATACATATATATGTGTATATATATATATATGTGTATATATATATATATATATATATATATATA	<24>,<27>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,10:19:255,255,248,160,0,117	1/1:0,4,0:5:186,15,0,142,15,129	1/2:0,1,1:4:91,23,14,57,0,51
+chr21	20450745	chr21:20450745:M	AGAAAAAAAAAAAGAAAAAGAA	<3.5>	.	.	Motif=AGAAAA	GT:AD:DP:PL	1/1:1,30:32:255,71,0	1/1:0,28:28:255,84,0	1/1:0,39:39:255,116,0
+chr21	20454899	chr21:20454899:M	TTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:16:255,47,0	1/1:0,9:17:255,47,0	1/1:0,11:12:255,36,0
+chr21	20460618	chr21:20460618:M	ACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,2:4:97,12,0	1/1:0,3:5:116,14,0	1/1:0,9:11:255,33,0
+chr21	20460632	chr21:20460632:M	AGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAAGAGA	<22.5>,<23.5>,<24.5>	.	.	Motif=AG	GT:AD:DP:PL	1/3:0,4,2,4:11:253,97,69,89,28,60,107,0,39,85	2/3:0,1,4,4:10:243,144,120,62,47,33,61,27,0,33	1/2:0,8,5,0:18:255,55,14,126,0,101,255,51,144,255
+chr21	20465604	chr21:20465604:M	ATATATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,28:28:255,84,0	1/1:0,38:39:255,117,0	1/1:0,36:36:255,108,0
+chr21	20466933	chr21:20466933:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:32:255,94,0	0/1:17,17:34:202,0,201	1/1:0,30:30:255,88,0
+chr21	20468084	chr21:20468084:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:7,0,22	0/1:1,4:5:46,0,1	0/1:1,3:4:35,0,4
+chr21	20475867	chr21:20475867:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:16:240,0,84	0/1:3,9:14:200,0,48	0/1:2,5:10:119,0,35
+chr21	20476756	chr21:20476756:M	TTATTATTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,38:38:255,113,0	1/1:0,33:33:255,97,0	1/1:0,39:40:255,118,0
+chr21	20481093	chr21:20481093:M	TTTTTTTTTATTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,40:40:255,120,0	1/1:0,43:43:255,129,0
+chr21	20482033	chr21:20482033:M	TGTGTGTGTGTGTGTGTGT	<12.5>,<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,26,19,0:46:255,255,255,255,0,255,255,255,255,255	1/3:0,17,1,15:35:255,255,255,255,239,255,255,0,255,255	1/2:0,23,18,0:41:255,255,255,255,0,255,255,255,255,255
+chr21	20482533	chr21:20482533:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:2,25:28:255,48,0	0/1:10,10:23:121,0,112
+chr21	20487619	chr21:20487619:M	AAAAAAACAAAAACAAAAACAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,23:46:255,0,255	0/1:25,19:44:255,0,255	1/1:0,37:37:255,111,0
+chr21	20488919	chr21:20488919:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,28:33:255,41,0	1/1:0,41:42:255,123,0	1/1:0,42:43:255,127,0
+chr21	20489184	chr21:20489184:M	ATATATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,25:25:255,74,0	0/1:20,17:37:209,0,255
+chr21	20493740	chr21:20493740:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5:18:37,0,172	0/1:9,9:19:98,0,108	1/1:0,21:23:255,66,0
+chr21	20500999	chr21:20500999:M	TGTGGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,5:18:255,110,88,197,0,255	1/2:0,13,7:23:255,186,136,227,0,255	1/2:1,9,10:20:255,242,226,140,0,210
+chr21	20503564	chr21:20503564:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,21,17:38:255,255,211,255,0,255	1/2:1,15,17:33:255,238,219,247,0,171	1/2:2,22,15:39:255,200,185,255,0,255
+chr21	20508543	chr21:20508543:M	TTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTT	<7.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:16,16:32:255,0,255	0/1:14,12:26:246,0,255	0/1:15,7:22:123,0,255
+chr21	20512491	chr21:20512491:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,11:26:140,155,255,0,229,178	0/2:26,1,26:54:255,255,255,0,255,255	0/1:13,20,0:33:255,0,255,255,231,255
+chr21	20535561	chr21:20535561:M	TTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,13:19:255,0,32	0/1:4,12:18:255,0,62	1/1:0,16:20:255,53,0
+chr21	20539643	chr21:20539643:M	CACACACACACACACACACACACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,17:39:196,0,255	0/1:14,25:40:255,0,136	0/1:24,18:43:197,0,255
+chr21	20553094	chr21:20553094:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,13,0,12:26:255,216,255,255,255,255,255,0,244,255	2/3:1,0,11,15:27:255,255,255,241,255,255,171,189,0,238	1/3:2,14,0,12:29:255,175,255,255,255,255,255,0,251,255
+chr21	20554292	chr21:20554292:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,30:31:255,89,0	1/1:0,11:15:189,25,0	0/1:5,16:21:225,0,28
+chr21	20560947	chr21:20560947:M	AAAAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:32:193,0,203	0/0:26,1:28:0,64,255	0/0:33,0:33:0,97,255
+chr21	20563377	chr21:20563377:M	GTTTTTTTGTTTGTTTGTTTTTGTTTGTTTGTTTTTTGTTTGTTT	<7.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/1:15,11:26:221,0,255	0/0:21,0:21:0,63,255
+chr21	20568009	chr21:20568009:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:19:34,0,196	0/1:16,4:20:10,0,215	0/1:15,3:23:17,0,219
+chr21	20572427	chr21:20572427:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:39:0,69,255	0/1:31,13:46:110,0,255	0/0:31,2:33:0,61,255
+chr21	20577323	chr21:20577323:M	AAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/1:12,10:25:207,0,255	0/0:17,0:23:0,67,255
+chr21	20579932	chr21:20579932:M	ACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:15,9:24:183,0,255	0/0:35,0:35:0,105,255
+chr21	20581354	chr21:20581354:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:39:0,115,255	0/1:25,23:51:255,0,255	0/0:32,0:37:0,110,255
+chr21	20584235	chr21:20584235:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,7:20:255,87,77,193,0,155	1/2:0,4,9:16:246,126,108,86,0,48	1/2:2,10,6:18:255,53,74,137,0,122
+chr21	20587000	chr21:20587000:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,15:16:255,44,0	1/1:0,2:2:37,6,0	1/1:0,14:14:255,41,0
+chr21	20587092	chr21:20587092:M	ACACACACACACACACACACACACACACACACACAC	<15>,<16>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,3,3:7:157,49,31,49,0,31	1/1:0,5,0:6:151,16,0,95,15,80	1/2:0,0,4:6:125,64,47,21,0,7
+chr21	20587129	chr21:20587129:M	TATATATATATATATATATATA	<9>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,5,4:11:149,46,31,113,0,122	2/2:0,0,1:1:14,14,14,3,3,0	1/1:0,7,1:10:189,24,0,195,13,235
+chr21	20587199	chr21:20587199:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,10:25:92,0,158	1/1:1,12:13:171,22,0	0/1:13,9:22:80,0,144
+chr21	20587266	chr21:20587266:M	TATATATATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,10:20:255,0,110	0/0:5,0:6:0,15,153	0/1:3,10:15:255,0,60
+chr21	20587529	chr21:20587529:M	TATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,9:29:26,0,255	0/0:19,2:21:0,38,255	0/0:14,1:15:0,33,255
+chr21	20587560	chr21:20587560:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,10:20:131,0,112	1/1:0,10:10:177,29,0	0/1:9,6:15:65,0,120
+chr21	20587665	chr21:20587665:M	TATATATATATATATATATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:9:121,25,0	1/1:0,2:2:27,6,0	1/1:0,1:2:13,3,0
+chr21	20587710	chr21:20587710:M	GTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,2:6:19,0,57	0/0:5,0:5:0,15,88	1/1:0,5:5:88,15,0
+chr21	20587723	chr21:20587723:M	TATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,9:17:62,0,178	0/1:5,2:7:4,0,121	0/0:6,1:7:0,9,158
+chr21	20587746	chr21:20587746:M	GTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,2:2:83,6,0	1/1:0,1:3:71,9,0	1/1:0,5:5:209,15,0
+chr21	20587767	chr21:20587767:M	TATATATATATATATATATATATATATATATATGTATATGTATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:9:126,26,0	1/1:0,2:3:28,6,0	1/1:0,1:1:14,3,0
+chr21	20587849	chr21:20587849:M	TATATATAGATATATATATCTATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,9:19:54,0,221	0/1:6,2:8:0,0,142	0/0:6,1:7:0,9,155
+chr21	20587901	chr21:20587901:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,9:16:57,0,146	0/0:9,1:10:0,18,236	0/0:7,1:8:0,13,215
+chr21	20587923	chr21:20587923:M	TATAATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,9:14:69,0,100	0/0:7,1:8:0,12,184	0/0:7,0:7:0,21,199
+chr21	20587966	chr21:20587966:M	TATATATATATATATATATATATATATATATA	<13>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,1,9:12:189,101,92,89,0,65	2/2:0,0,1:1:14,14,14,3,3,0	1/1:0,3,0:4:117,12,0,118,12,120
+chr21	20587997	chr21:20587997:M	ACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,5:13:110,0,129	1/1:0,9:10:252,30,0	0/0:9,1:10:0,3,217
+chr21	20588087	chr21:20588087:M	TATATATATATATATATA	<16>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:9:133,133,133,26,26,0	2/2:0,0,1:1:15,15,15,3,3,0	1/1:0,3,0:4:99,6,0,100,9,103
+chr21	20588119	chr21:20588119:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,9:21:50,0,255	0/0:5,1:6:0,6,131	0/0:27,0:28:0,84,255
+chr21	20588145	chr21:20588145:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,9:22:47,0,255	0/0:6,1:7:0,9,159	0/0:32,0:32:0,96,255
+chr21	20588236	chr21:20588236:M	ATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,9:17:62,0,179	0/0:5,1:6:0,6,127	0/0:20,0:20:0,60,255
+chr21	20588446	chr21:20588446:M	TATATATACATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,6:18:20,0,255	0/0:15,1:16:0,36,255	0/0:21,0:21:0,63,255
+chr21	20588518	chr21:20588518:M	TATATATATATATATATATATA	<16>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,6:12:187,58,40,129,0,113	2/2:0,0,1:1:12,12,12,3,3,0	1/1:0,3,0:4:98,12,0,98,12,98
+chr21	20600172	chr21:20600172:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,16:24:233,0,39	1/1:0,16:17:255,49,0	0/1:9,20:29:255,0,73
+chr21	20600593	chr21:20600593:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,20:32:255,0,133	1/1:0,23:23:255,68,0	0/1:20,17:39:219,0,255
+chr21	20603452	chr21:20603452:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTCTTTTCTCTTCTTTT	<7.6>,<9.6>,<12.6>,<13.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/2:0,8,8,0,0:16:255,226,200,222,0,195,255,226,222,255,255,226,222,255,255	2/3:0,0,12,4,0:16:255,255,255,115,115,79,255,255,0,255,255,255,72,255,255	1/4:0,13,0,0,5:18:255,142,103,255,142,255,255,94,255,255,255,0,255,255,255
+chr21	20606508	chr21:20606508:M	GAGAGAGAGAGAGAGAGAGAGA	<12>	.	.	Motif=GA	GT:AD:DP:PL	0/0:35,0:37:0,106,255	0/1:11,8:20:85,0,148	0/1:19,18:37:225,0,243
+chr21	20616707	chr21:20616707:M	ATATACATATATGTATATGTATAATATGTATTTATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,1:19:0,3,255	0/1:10,5:16:182,0,227	0/1:15,4:19:127,0,255
+chr21	20633056	chr21:20633056:M	ACACACACACAAACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:44,0:44:0,122,255	0/1:24,25:49:173,0,160	0/0:28,0:28:0,78,255
+chr21	20637098	chr21:20637098:M	AATAATAATAATAATAAATAAATAAATAAATAATAAT	<14>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:24,0:25:0,75,255	0/1:8,7:15:143,0,170	0/0:17,0:18:0,54,255
+chr21	20641025	chr21:20641025:M	AAAAAAAAAAAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:58,6,0	0/1:2,1:4:31,0,45	0/1:2,4:6:95,0,42
+chr21	20656183	chr21:20656183:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:7:74,4,0	0/1:3,1:5:2,0,42	0/1:1,3:4:36,0,4
+chr21	20657799	chr21:20657799:M	ATATATATATATATATATATATATATATATAT	<14>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,4:11:95,0,45	0/1:3,2:6:42,0,40	1/1:1,5:10:110,4,0
+chr21	20660697	chr21:20660697:M	ATCAGTCAATCAATCAAT	<3.8>	.	.	Motif=ATCA	GT:AD:DP:PL	0/1:16,13:29:248,0,255	0/1:15,17:32:255,0,255	1/1:0,25:25:255,75,0
+chr21	20681652	chr21:20681652:M	TTTTTGTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:159,0,196	0/1:12,18:30:228,0,123	1/1:1,29:32:255,75,0
+chr21	20683532	chr21:20683532:M	AAAAAAAAAAAAAAAAAAAGAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:10,16,80,0,77,107	0/2:1,1,3:7:68,35,46,0,12,25	1/2:0,3,1:4:67,17,5,42,0,39
+chr21	20686872	chr21:20686872:M	ACACACACACACACACACACACACACACACACACACACACA	<22.5>,<23.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,3,0,3:8:128,56,73,101,81,128,51,0,60,87	1/2:0,1,4,0:7:133,56,42,16,0,21,133,62,38,155	1/3:0,1,0,5:8:176,148,144,148,132,147,27,0,24,23
+chr21	20694434	chr21:20694434:M	AAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:96,0,8	0/1:2,3:7:83,0,32	1/1:0,5:5:131,15,0
+chr21	20694494	chr21:20694494:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,13:34:51,0,137	0/1:16,18:34:103,0,82	0/1:13,21:34:137,0,51
+chr21	20700747	chr21:20700747:M	TATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,33:37:255,69,0	1/1:0,37:39:255,114,0	1/1:2,50:55:255,125,0
+chr21	20701603	chr21:20701603:M	CCCCCCACCCCCCCCACCCCCCCC	<27>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,3:3:80,9,0	0/1:4,2:6:33,0,82	0/1:5,2:7:32,0,107
+chr21	20701939	chr21:20701939:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:35:255,84,0	0/1:6,11:19:154,0,50	0/1:12,17:30:216,0,137
+chr21	20726922	chr21:20726922:M	AAAATAAAAAAAATA	<3.2>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:22,20:42:255,0,255	0/0:45,0:45:0,135,255	0/1:19,14:33:253,0,255
+chr21	20732932	chr21:20732932:M	AATAATAATAATAATAATAATAAT	<10>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:17,8:26:157,0,255	0/0:32,0:32:0,96,255	0/1:21,14:35:255,0,255
+chr21	20740961	chr21:20740961:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,21:42:255,0,255	1/1:0,33:33:255,97,0	0/0:36,2:40:0,80,255
+chr21	20741363	chr21:20741363:M	TGTTTGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	<7.8>,<8.8>	.	.	Motif=TGTT	GT:AD:DP:PL	1/2:0,13,21:34:255,255,255,249,0,153	1/1:0,42,0:42:255,126,0,255,124,255	2/2:0,0,31:31:255,255,255,92,92,0
+chr21	20742184	chr21:20742184:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:37:214,0,255	0/0:31,0:31:0,91,255	0/1:17,28:46:255,0,190
+chr21	20742455	chr21:20742455:M	ATATATATATTATATATATATATATATATAATATATATATATAT	<20>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:10:198,23,0	.	0/1:1,6:7:139,0,7
+chr21	20744350	chr21:20744350:M	TATATATATATTTTATATATATATATAAAGTATGTATATATA	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,11:18:123,0,57	.	0/0:9,0:9:0,26,138
+chr21	20747431	chr21:20747431:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,10:21:255,158,125,199,0,142	2/2:1,2,16:19:255,238,255,38,20,0	0/1:11,14,1:27:255,0,238,242,180,255
+chr21	20750918	chr21:20750918:M	ACACACACACACACACACACACACACACGCACACACACACACAC	<8>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,13:28:255,255,255,255,0,255	2/2:0,0,22:23:255,255,255,69,69,0	0/1:8,13,0:22:255,0,173,255,212,255
+chr21	20758029	chr21:20758029:M	ACACACACATACACACACACACACACACACACACACACACACAC	<21>,<23>,<26>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,2:7:131,145,190,55,56,41,89,136,0,133	2/2:1,0,6,0:7:86,105,176,3,18,0,106,183,21,197	1/3:1,8,0,6:17:255,149,137,255,164,255,141,0,255,255
+chr21	20758579	chr21:20758579:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:36:255,106,0	1/1:1,32:34:255,82,0	0/1:20,17:38:197,0,255
+chr21	20771559	chr21:20771559:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:18:77,0,151	0/0:23,1:25:0,56,255	0/1:15,13:29:150,0,196
+chr21	20772669	chr21:20772669:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,8,1:11:117,13,0,96,14,117	1/1:0,16,0:16:234,46,0,234,46,234	0/2:12,0,11:23:220,159,255,0,174,245
+chr21	20776876	chr21:20776876:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,14:27:255,219,180,235,0,160	2/2:1,1,26:28:255,255,255,64,64,0	0/1:11,17,0:28:255,0,236,255,195,255
+chr21	20787783	chr21:20787783:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,7:20:255,111,72,240,0,185	2/2:0,0,33:33:255,255,255,97,97,0	0/1:14,23,0:37:255,0,255,255,249,255
+chr21	20791347	chr21:20791347:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:30,16:46:175,0,255	0/0:41,0:41:0,121,255	0/1:22,32:54:255,0,255
+chr21	20793091	chr21:20793091:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,4:17:22,0,184	0/1:2,9:11:122,0,2	0/0:14,0:18:0,52,255
+chr21	20813660	chr21:20813660:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,5:39:0,24,255	0/1:28,7:36:26,0,255	0/1:16,16:34:205,0,186
+chr21	20815942	chr21:20815942:M	TGTTTTTGTTGTTGTTGTTGTTGTTTTTGTTTTTGTTTTTGTT	<6.7>	.	.	Motif=TGTTGT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,29:30:255,89,0	1/1:0,23:25:255,73,0
+chr21	20816929	chr21:20816929:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:8:120,36,31,43,0,59	2/2:0,0,2:3:82,59,51,9,9,0	1/2:1,2,2:6:50,7,20,2,0,33
+chr21	20818381	chr21:20818381:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,25:43:255,0,212	0/0:27,1:29:0,67,255	1/1:2,35:38:255,76,0
+chr21	20824260	chr21:20824260:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,57,0	1/1:0,20:24:255,63,0	0/1:17,10:29:201,0,255
+chr21	20826712	chr21:20826712:M	ATATATATATATATATATATATATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:18:255,8,0	0/1:0,0:3:1,0,12	1/1:0,5:7:161,20,0
+chr21	20833099	chr21:20833099:M	AACAACAACAACAACAACAACAACAACAACAACAACAACAA	<11.7>,<12.7>	.	.	Motif=AAC	GT:AD:DP:PL	2/2:0,1,21:22:255,255,255,65,46,0	2/2:0,1,27:28:255,255,255,82,64,0	1/2:0,13,9:22:255,144,105,241,0,180
+chr21	20837778	chr21:20837778:M	TTTTCTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,1:7:0,2,88	0/1:2,4:7:64,0,13	0/0:5,0:6:0,2,72
+chr21	20845702	chr21:20845702:M	TCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCT	<11.8>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:11,6:17:69,0,169	1/1:0,17:17:255,50,0	0/0:9,0:9:0,27,179
+chr21	20868827	chr21:20868827:M	CACACACACACACACACACAC	<9.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,17:31:233,0,176	1/1:1,41:42:255,106,0	0/0:53,1:54:0,141,255
+chr21	20872700	chr21:20872700:M	TTATTATTATTATTATTATTATTATTATTATTATTA	<14>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:13,10:24:205,0,255	0/0:7,0:7:0,21,192	1/1:0,13:13:255,39,0
+chr21	20874947	chr21:20874947:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,19:37:255,0,209	1/1:1,34:38:255,93,0	0/1:18,16:34:191,0,228
+chr21	20896785	chr21:20896785:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAGTGTGTGTGTGT	<12.5>,<14.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/3:6,1,0,9:16:95,115,255,137,255,255,0,70,92,49	2/3:0,0,3,3:10:90,100,137,35,73,64,58,66,0,58	0/1:6,4,0,0:10:72,0,130,88,142,227,89,89,176,162
+chr21	20899471	chr21:20899471:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGT	<21>,<23>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,10,0:26:255,141,220,210,0,255,255,255,255,255	1/3:0,4,0,4:8:165,111,99,172,107,204,65,0,103,94	2/2:1,0,13,0:15:205,246,255,24,42,0,246,255,45,255
+chr21	20899973	chr21:20899973:M	GTGTGTGGGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,13:29:165,0,222	0/0:35,0:35:0,103,255	1/1:0,46:46:255,136,0
+chr21	20902031	chr21:20902031:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:24:110,0,184	0/1:10,16:29:201,0,100	1/1:2,18:21:255,26,0
+chr21	20905429	chr21:20905429:M	TATATATATATATATATATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,6:17:64,0,157	0/0:2,0:2:0,6,36	1/1:0,10:10:187,30,0
+chr21	20906537	chr21:20906537:M	AAAAAAACAGAAAAAAAAAAAAAAAAAGAAAAAAA	<34>,<36>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,3:12:122,47,66,84,0,133	0/2:5,1,4:11:50,62,169,0,55,66	1/1:1,19,0:20:255,41,0,255,57,255
+chr21	20908692	chr21:20908692:M	AAAAAAAAAAAAA	<14>,<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,1,9,6:16:255,255,255,158,142,129,233,143,0,224	1/3:0,9,0,4:14:248,117,91,245,115,243,155,0,155,238	2/2:0,1,24,0:25:255,255,255,72,56,0,255,255,75,255
+chr21	20914534	chr21:20914534:M	AAAAAAAAAGAAAAAGAAAAAAAAA	<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16,0:30:215,0,177,255,255,255	0/2:16,0,15:31:255,255,255,0,255,255	1/1:0,27,0:27:255,80,0,255,80,255
+chr21	20918816	chr21:20918816:M	GAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA	<7.4>,<12.2>,<13.4>	.	.	Motif=GAAAA	GT:AD:DP:PL	2/3:0,0,6,2:8:218,218,218,54,54,34,159,159,0,150	1/2:0,9,4,0:14:255,109,79,253,0,241,255,105,253,255	3/3:0,0,0,10:10:255,255,255,255,255,255,30,30,30,0
+chr21	20926550	chr21:20926550:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,15,0:29:255,0,255,255,225,255	0/2:15,0,9:25:86,156,255,0,255,203	1/1:0,42,0:45:255,134,0,255,134,255
+chr21	20937991	chr21:20937991:M	ACACACGCACACACACACACACACACACACACGCACACAC	<17>,<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	2/3:1,0,14,13:28:255,255,255,226,245,163,205,255,0,189	1/2:0,19,8,0:28:255,141,227,255,0,255,255,141,255,255	3/3:0,0,0,23:23:255,255,255,255,255,255,69,69,68,0
+chr21	20945365	chr21:20945365:M	AATAATAATAAT	<3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:17,20:37:255,0,220	0/0:40,0:40:0,118,255	1/1:0,44:44:255,130,0
+chr21	20948462	chr21:20948462:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,11:23:236,0,208	0/0:19,0:20:0,57,255	1/1:0,26:29:255,83,0
+chr21	20955178	chr21:20955178:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,10:17:128,0,46	0/0:15,2:24:0,30,255	0/1:1,4:5:54,0,2
+chr21	20971844	chr21:20971844:M	AAAAAAAAACAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:24,11:39:208,0,255	0/0:37,0:38:0,114,255
+chr21	20972116	chr21:20972116:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,28:47:255,0,189	1/1:1,44:46:255,117,0	0/0:36,3:39:0,60,255
+chr21	20975051	chr21:20975051:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:7:0,21,125	0/1:6,5:12:60,0,67	0/0:7,0:7:0,21,122
+chr21	20975221	chr21:20975221:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:12,0,92	0/1:1,3:6:64,0,21	0/0:7,0:7:0,21,190
+chr21	20975464	chr21:20975464:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:129,15,0	1/1:0,2:3:73,9,0	.
+chr21	20976561	chr21:20976561:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,3:30:0,33,255	0/1:7,14:22:187,0,57	0/1:10,11:22:132,0,123
+chr21	20978900	chr21:20978900:M	TTTTTTTTATTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,20:27:255,0,51	0/1:12,9:22:104,0,147	0/0:22,0:23:0,67,255
+chr21	20981661	chr21:20981661:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,10,17:30:255,255,255,255,0,224	1/2:0,18,13:32:255,223,255,255,0,255	2/2:0,0,24:25:255,255,255,73,72,0
+chr21	20982238	chr21:20982238:M	TATATATATATATATATATATA	<20.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,3:7:108,36,24,73,0,64	.	1/1:0,4,0:4:119,12,0,119,12,119
+chr21	20984522	chr21:20984522:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:0,29:30:255,88,0	1/1:0,42:42:255,124,0
+chr21	20986545	chr21:20986545:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	0/1:3,3:7:31,0,32	1/1:0,0:1:11,3,0
+chr21	20992105	chr21:20992105:M	TTTAGTTTTATTTTTCTATTTTTTTTTTTTTTA	<5.3>	.	.	Motif=TTTATT	GT:AD:DP:PL	1/1:0,10:10:132,28,0	1/1:1,11:12:132,20,0	1/1:1,37:40:255,98,0
+chr21	20995361	chr21:20995361:M	CTCTCTCTCTCTCTCTTATCTTCCCTCTGTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTC	<29.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:11,7:18:42,0,95	0/1:10,3:13:2,0,92	0/0:14,3:17:0,9,144
+chr21	20995623	chr21:20995623:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:13:233,38,0	1/1:1,11:12:170,18,0	1/1:1,16:17:255,32,0
+chr21	20996106	chr21:20996106:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<20>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/4:0,7,0,0,5:12:255,141,123,255,144,255,255,144,255,255,202,0,197,202,187	1/2:0,9,13,0,0:25:255,255,255,255,0,207,255,255,254,255,255,255,255,255,255	3/4:0,0,0,7,3:10:181,203,255,202,255,255,82,85,85,63,121,198,193,0,189
+chr21	21009884	chr21:21009884:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,10,0:22:239,0,255,255,255,255	1/2:0,13,8:23:255,218,174,255,0,255	0/0:14,0,0:16:0,42,255,42,255,255
+chr21	21011155	chr21:21011155:M	TTTTTTTTTCTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,0:38:0,112,255	0/1:12,25:38:255,0,105	0/1:26,16:42:174,0,255
+chr21	21013782	chr21:21013782:M	AAAAAAAAAAAAAGAAAATAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0,0:30:0,90,255,87,255,255	0/2:7,0,11:20:255,193,255,0,190,152	0/1:8,16,0:26:255,0,167,255,214,255
+chr21	21014424	chr21:21014424:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:18:0,35,255	0/1:8,4:13:30,0,108	0/0:13,0:16:0,43,243
+chr21	21026626	chr21:21026626:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,62,0	0/1:23,13:39:130,0,255	0/1:12,11:23:120,0,137
+chr21	21026856	chr21:21026856:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:14:0,11,112	1/1:2,8:13:77,5,0	0/0:6,0:7:0,19,85
+chr21	21031810	chr21:21031810:M	ACACACACACACACACACACTCACACACAC	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	0/2:22,0,22:44:255,255,255,0,255,255	1/2:0,14,28:42:255,255,255,255,0,133	0/0:33,1,1:35:0,69,255,70,255,255
+chr21	21032929	chr21:21032929:M	TTTCTTTCTTTCTTTCTTT	<1.5>,<2.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,7,0:7:184,21,0,148,21,132	1/2:0,12,9:21:255,160,101,209,0,152	2/2:0,0,16:16:255,255,255,48,47,0
+chr21	21032945	chr21:21032945:M	TTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:9:174,128,116,58,0,127	.	1/2:0,2,3:7:124,79,67,57,0,107
+chr21	21043851	chr21:21043851:M	AAAAAAAAAAAAAAAAAGAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:164,29,0	0/1:2,10:14:135,0,3	1/1:2,18:20:255,24,0
+chr21	21044036	chr21:21044036:M	TGTGTGTGTGTGTGTG	<9>,<10>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,7:23:255,132,66,255,0,239	1/2:0,19,12:31:255,214,125,255,0,251	1/1:1,40,0:41:255,102,0,255,121,255
+chr21	21049014	chr21:21049014:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,2:11:255,36,4,163,0,132	1/1:0,10,0:11:255,30,0,203,32,185	1/2:0,5,5:11:255,97,68,88,0,57
+chr21	21049872	chr21:21049872:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,17:42:202,0,255	0/0:45,0:46:0,135,255	0/1:23,20:44:241,0,255
+chr21	21050137	chr21:21050137:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:41:224,0,255	0/0:38,2:40:0,83,255	0/1:18,16:36:181,0,226
+chr21	21051263	chr21:21051263:M	AGCTAGCTAGC	<1.8>	.	.	Motif=AGCT	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:21,21:42:255,0,255	1/1:0,52:52:255,154,0
+chr21	21052151	chr21:21052151:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,3:3:91,91,91,9,9,0	2/2:0,0,1:2:28,30,41,3,6,0	1/1:0,4,0:5:141,15,0,137,15,134
+chr21	21053945	chr21:21053945:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,58:59:255,155,0	1/1:0,43:43:255,127,0	1/1:0,48:48:255,142,0
+chr21	21056491	chr21:21056491:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<20>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,14,6,0:20:255,103,121,242,0,255,255,163,255,255	1/1:0,8,0,0:8:134,23,0,156,24,233,157,24,239,247	2/3:0,0,12,6:21:255,255,255,180,181,135,209,255,0,255
+chr21	21056528	chr21:21056528:M	GAGAGAGGGGGAGAGAGAGGAGAGAGAGAGAGAGTGAGAGAGAGAGATAGTGAGAGAGAGAGA	<30.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:2,8:10:80,2,0	1/1:0,8:8:104,22,0	0/0:9,0:9:0,25,118
+chr21	21058145	chr21:21058145:M	AAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:26:255,78,0	1/1:0,11:18:255,41,0	1/1:0,19:21:255,60,0
+chr21	21058670	chr21:21058670:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,27:30:255,52,0	0/1:13,14:31:171,0,153	1/1:4,34:39:255,35,0
+chr21	21063211	chr21:21063211:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,14:17:255,49,0	0/0:0,0:1:0,0,0
+chr21	21066418	chr21:21066418:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:20,16:36:183,0,255	0/0:33,0:34:0,100,255
+chr21	21068127	chr21:21068127:M	TTTTTTTTCTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:8:137,23,0	0/1:3,4:8:53,0,26	1/1:0,10:11:179,32,0
+chr21	21068459	chr21:21068459:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:10:147,0,27	0/1:5,7:14:155,0,94	0/0:10,0:11:0,30,255
+chr21	21070268	chr21:21070268:M	TATATATATATATATATATA	<9>,<11>	.	.	Motif=TA	GT:AD:DP:PL	0/1:6,19,1:26:255,0,47,255,78,255	1/2:0,15,7:23:255,137,189,255,0,255	0/0:31,0,0:31:0,91,255,91,255,255
+chr21	21071871	chr21:21071871:M	CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11>	.	.	Motif=CTAT	GT:AD:DP:PL	0/1:13,13:27:255,0,255	1/1:0,20:21:255,63,0	0/1:11,9:20:188,0,244
+chr21	21076117	chr21:21076117:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,7:23:134,0,255	0/1:12,9:23:175,0,255	0/0:29,0:29:0,87,255
+chr21	21080615	chr21:21080615:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:24:96,0,198	0/1:12,9:21:96,0,148	0/0:26,0:26:0,77,255
+chr21	21080657	chr21:21080657:M	AAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:143,13,0	0/1:1,2:3:45,0,17	0/0:4,0:5:0,15,149
+chr21	21081863	chr21:21081863:M	AAACAAACAAACA	<2.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:22,29:51:255,0,255	1/1:0,60:60:255,177,0	0/0:35,0:35:0,103,255
+chr21	21082226	chr21:21082226:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:13:103,0,146	1/1:0,3:4:97,12,0	0/0:17,0:20:0,59,255
+chr21	21082277	chr21:21082277:M	AAAACAAAAAAAAAAAAACAAAACAAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,4:14:227,101,90,109,0,193	2/2:0,0,12:13:255,255,255,39,36,0	1/1:2,20,0:22:255,29,0,255,65,255
+chr21	21085202	chr21:21085202:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:45:252,0,255	1/1:1,34:36:255,88,0	0/0:46,0:47:0,138,255
+chr21	21088971	chr21:21088971:M	AAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,15:26:255,0,211	1/1:0,19:21:255,62,0	0/0:37,0:38:0,114,255
+chr21	21106315	chr21:21106315:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:14:208,24,0	.	1/1:1,24:28:255,64,0
+chr21	21114827	chr21:21114827:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:40:255,117,0	1/1:2,27:30:255,52,0	1/1:1,38:40:255,100,0
+chr21	21115958	chr21:21115958:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTTTCATGCTGAGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<37.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,1:7:44,6,0	1/1:0,7:14:204,21,0	0/0:0,0:6:0,0,0
+chr21	21123400	chr21:21123400:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,25:28:255,46,0	1/1:2,27:30:255,53,0	1/1:1,40:41:255,103,0
+chr21	21125715	chr21:21125715:M	AGAGAGAGAGAGA	<10.5>,<11.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,6,21:27:255,255,205,85,0,4	1/2:0,4,10:14:255,132,91,55,0,13	2/2:0,4,19:23:255,255,199,69,12,0
+chr21	21128245	chr21:21128245:M	TTTTTTTTTTTTCTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,34:35:255,102,0	1/1:1,37:39:255,96,0
+chr21	21134065	chr21:21134065:M	TTTTTTTTTTTTTTTTT	<14>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	3/3:1,0,0,20:21:255,255,255,255,255,255,44,63,62,0	1/3:1,10,1,16:29:255,255,255,255,255,255,255,0,166,224	2/3:1,0,7,5:13:244,196,248,58,98,64,107,106,0,88
+chr21	21134711	chr21:21134711:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,32:33:255,255,255,79,97,0	1/2:0,18,10:30:255,151,93,255,0,255	2/2:1,0,19:20:255,255,255,41,59,0
+chr21	21135080	chr21:21135080:M	AAAAAAAAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,4:10:56,82,235,0,82,56	0/1:6,7,1:14:174,0,146,177,87,255	0/2:11,0,7:20:79,134,255,0,207,154
+chr21	21135246	chr21:21135246:M	AAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5,0:5:144,15,0,104,15,91	1/2:0,1,7:10:205,114,91,18,0,13	1/2:0,5,1:6:161,18,0,88,0,71
+chr21	21136465	chr21:21136465:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,71,255	0/1:12,19:33:255,0,233	0/0:15,0:18:0,44,255
+chr21	21136902	chr21:21136902:M	TTTTTTTTTTTT	<11>,<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,29,19:51:255,255,255,255,255,220,255,255,0,255	1/3:2,16,1,20:41:255,255,255,255,255,255,255,0,255,255	2/3:1,0,18,19:41:255,255,255,255,255,255,255,255,0,223
+chr21	21142366	chr21:21142366:M	TTTTTTTTTATGTTTTTTTTTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,2:6:72,17,18,26,0,46	1/2:1,6,2:9:113,17,7,66,0,83	1/2:0,5,3:8:146,51,28,71,0,62
+chr21	21143805	chr21:21143805:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,1,19:37:255,255,255,0,233,255	1/2:1,10,11:23:255,186,140,130,0,119	0/2:13,4,13:35:255,171,255,0,190,255
+chr21	21144345	chr21:21144345:M	AAAAAGAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,18:26:255,0,73	0/1:14,25:41:255,0,137	0/1:17,9:27:94,0,231
+chr21	21146547	chr21:21146547:M	ATATATATATGTATATATATATATATAT	<11>,<13>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,11:19:255,202,255,241,0,194	1/2:0,4,1:5:128,17,18,108,0,102	1/2:0,10,2:13:255,37,20,255,0,255
+chr21	21147706	chr21:21147706:M	ATATTATATACTATATATAATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,6:23:107,0,255	0/0:10,0:10:0,30,255	0/1:14,13:27:255,0,255
+chr21	21150978	chr21:21150978:M	ATATATATATAT	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,117,0	0/1:18,27:45:255,0,255	1/1:0,50:50:255,149,0
+chr21	21156569	chr21:21156569:M	ATAGATAGATTATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<13.5>,<14.5>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:8,12,0:20:160,0,87,184,143,255	0/0:29,1,0:31:0,71,255,87,255,255	1/2:0,6,6:14:236,105,72,89,0,71
+chr21	21158613	chr21:21158613:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:23:255,42,0	1/1:0,13:15:255,44,0	1/1:0,21:22:255,66,0
+chr21	21161562	chr21:21161562:M	TGTGTGTGTGTGTGTGTGTATGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,40:42:255,123,0	1/1:1,42:44:255,111,0	1/1:1,40:41:255,103,0
+chr21	21175533	chr21:21175533:M	AAAAAAAATAAAAAAAAATAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:28:0,76,255	0/0:27,0:27:0,79,255	0/1:15,14:31:157,0,175
+chr21	21198185	chr21:21198185:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,14:30:255,255,255,255,0,255	1/2:0,16,6:23:255,159,105,255,0,255	1/2:0,12,15:30:255,255,255,255,0,255
+chr21	21200410	chr21:21200410:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:17:240,22,0	0/1:5,14:20:180,0,37	1/1:3,21:25:255,20,0
+chr21	21200752	chr21:21200752:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:80,9,0	0/1:1,1:2:21,0,21	0/1:0,0:2:0,0,0
+chr21	21210968	chr21:21210968:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<20>,<21>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,24:26:255,255,255,75,64,0	1/2:0,11,10:23:255,167,100,204,0,142	2/2:0,2,18:20:255,255,255,60,24,0
+chr21	21212743	chr21:21212743:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:90,15,0	0/1:2,9:11:123,0,2	1/1:0,6:6:106,18,0
+chr21	21215733	chr21:21215733:M	AAATAAATAAATAAA	<2.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,37:37:255,109,0	1/1:0,30:30:255,88,0	1/1:0,29:29:255,86,0
+chr21	21236757	chr21:21236757:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,35:37:255,110,0	1/1:0,23:23:255,69,0	1/1:0,40:40:255,120,0
+chr21	21237950	chr21:21237950:M	TTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,17:20:255,60,0	1/1:0,23:26:255,78,0
+chr21	21251745	chr21:21251745:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,75,0	1/1:0,37:42:255,115,0	1/1:0,30:41:255,101,0
+chr21	21254899	chr21:21254899:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,25:28:255,79,0	1/1:0,23:25:255,73,0	1/1:0,32:33:255,97,0
+chr21	21254950	chr21:21254950:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,29:30:255,90,0	1/1:0,40:41:255,123,0
+chr21	21259920	chr21:21259920:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,42,0	1/1:0,16:16:255,48,0	1/1:0,18:18:255,54,0
+chr21	21260565	chr21:21260565:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,43:46:255,98,0	1/1:0,41:41:255,121,0	1/1:2,38:42:255,86,0
+chr21	21264743	chr21:21264743:M	TATATATATACATATATATATATTCCACTATATATATACATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,18:30:255,0,211	1/1:0,21:21:255,63,0	0/1:11,19:30:255,0,209
+chr21	21272498	chr21:21272498:M	GCGCGCGCGCGC	<4>,<7>	.	.	Motif=GC	GT:AD:DP:PL	1/2:0,11,6:17:255,80,111,242,0,241	1/2:0,27,13:40:255,169,238,255,0,255	1/2:1,11,5:17:255,53,98,226,0,240
+chr21	21272509	chr21:21272509:M	CACACACACACACACACACACACAC	<9.5>,<10.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,15,11:29:255,151,66,237,0,154	2/2:0,3,29:32:255,255,255,96,51,0	1/2:0,27,13:42:255,178,55,255,0,255
+chr21	21272935	chr21:21272935:M	CACACACACACACACACACACACACACACGGGACATGCATTCACACACATACACACACACACACACACACACACA	<35.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,3:3:80,9,0	0/0:0,0:1:0,0,0	1/1:0,1:1:27,3,0
+chr21	21280170	chr21:21280170:M	GTGTGTGTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,18:36:240,0,239	1/1:0,45:45:255,132,0	0/1:23,26:49:255,0,255
+chr21	21298589	chr21:21298589:M	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGATAGA	<10.5>,<11.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/2:0,8,13:23:255,226,166,140,0,79	1/1:0,20,0:21:255,60,0,255,58,255	1/2:0,13,12:28:255,206,132,225,0,151
+chr21	21301371	chr21:21301371:M	TTTTTTTTTTTCTATTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,11:18:255,0,94	1/1:0,29:30:255,90,0	0/1:13,19:35:255,0,255
+chr21	21308063	chr21:21308063:M	ACACACATACACACACACACACACGTACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,7:26:122,0,255	1/1:0,19:21:255,62,0	0/1:18,8:27:138,0,255
+chr21	21311336	chr21:21311336:M	TTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:71,0,44	1/1:0,8:10:251,29,0	0/1:1,3:4:77,0,18
+chr21	21312567	chr21:21312567:M	GAAAAAGAAAAAAAAA	<2.5>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:27,29:56:255,0,255	1/1:0,38:38:255,114,0	0/1:28,19:47:255,0,255
+chr21	21316534	chr21:21316534:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3,0:8:32,0,52,41,47,125	1/2:1,1,4:6:53,53,104,2,0,14	0/2:4,0,5:9:61,87,199,0,58,43
+chr21	21319704	chr21:21319704:M	TTATTTTTTTTTTATTTTT	<3.3>	.	.	Motif=TTATTT	GT:AD:DP:PL	1/1:1,35:36:255,85,0	1/1:1,48:50:255,125,0	1/1:0,33:33:255,99,0
+chr21	21327307	chr21:21327307:M	AAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:6:19,0,29	0/1:2,4:6:47,0,15	1/1:0,1:1:17,3,0
+chr21	21331518	chr21:21331518:M	TATATATATATATATATACTCTATATACATATATATATATACTCTATATACATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:6:54,13,0	1/1:0,3:3:32,8,0	1/1:0,4:5:43,11,0
+chr21	21331579	chr21:21331579:M	AGAGAGAGAGAGAGAGAGAGAGAGTGAGAGAGAGA	<20.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,2:2:53,6,0	0/0:1,0:2:0,3,28	1/1:0,3:6:118,17,0
+chr21	21331901	chr21:21331901:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:11,12:23:164,0,145	1/1:0,24:24:255,71,0	0/1:15,16:31:210,0,191
+chr21	21341709	chr21:21341709:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:0,29:30:255,85,0	1/1:1,19:21:255,33,0
+chr21	21343353	chr21:21343353:M	ACACATACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,7:15:255,121,160,203,0,186	2/2:0,0,14:15:234,255,255,41,41,0	1/2:0,11,13:24:255,221,255,255,0,251
+chr21	21346209	chr21:21346209:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:34:216,0,189	0/1:14,4:21:8,0,209	0/1:20,9:29:73,0,255
+chr21	21351118	chr21:21351118:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:87,9,0	1/1:0,5:7:168,21,0	1/1:0,3:4:97,12,0
+chr21	21352827	chr21:21352827:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,1,15:26:214,218,255,0,165,109	1/2:2,22,13:38:255,158,141,255,0,255	0/2:9,1,11:22:152,151,255,0,156,113
+chr21	21356988	chr21:21356988:M	AATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<10.8>,<11.8>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,9,10:19:255,191,139,149,0,119	1/1:0,14,0:14:255,41,0,255,41,255	1/2:0,3,4:7:153,74,55,48,0,36
+chr21	21365239	chr21:21365239:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<14>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,32,0:34:255,102,0,255,100,255	1/2:0,8,9:17:255,157,107,140,0,90	1/1:0,19,0:19:255,57,0,255,56,255
+chr21	21378176	chr21:21378176:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:0,39:39:255,115,0	1/1:0,47:50:255,146,0
+chr21	21385372	chr21:21385372:M	ACACACACACACACACACACACACACACGCACACACACATACACACACACA	<29.5>,<30.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:4,0,4:10:99,80,183,0,113,99	1/2:0,6,5:12:255,86,52,112,0,80	0/2:8,0,4:12:81,70,255,0,211,199
+chr21	21387177	chr21:21387177:M	CACACACACATACACACACACACACACACACACACACACACACACACA	<23>,<25>,<27>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,10,0,4:14:255,109,80,255,108,255,179,0,255,255	2/3:1,0,6,9:17:255,255,255,236,251,222,87,162,0,143	1/3:0,11,0,0:17:205,43,11,236,44,255,193,0,255,255
+chr21	21400598	chr21:21400598:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,6:19:52,0,171	0/0:20,1:23:0,47,255	0/1:13,8:21:79,0,168
+chr21	21411006	chr21:21411006:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:12:0,9,255	0/1:9,5:15:101,0,187	0/0:16,2:19:0,0,255
+chr21	21411220	chr21:21411220:M	ATATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:28,11:39:20,0,255	0/0:29,0:29:0,87,255	0/0:29,5:34:0,40,255
+chr21	21414474	chr21:21414474:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,9:18:110,0,109	0/0:13,0:14:0,41,233	1/1:2,14:17:225,14,0
+chr21	21414950	chr21:21414950:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,14:33:173,0,239	1/1:1,36:38:255,93,0	0/1:11,20:33:255,0,104
+chr21	21416495	chr21:21416495:M	AAAAAAAAAAAGAAAAGAAAAAAGAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,11:25:224,0,255	1/1:0,35:37:255,110,0	0/1:21,9:31:163,0,255
+chr21	21419306	chr21:21419306:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,6:10:142,0,58	1/1:0,11:14:255,41,0	0/1:3,5:10:119,0,57
+chr21	21431047	chr21:21431047:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,52	1/1:0,0:2:2,1,0	0/1:1,3:4:39,0,5
+chr21	21431124	chr21:21431124:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,17:36:177,0,208	1/1:0,12:16:191,35,0	0/1:18,18:36:189,0,187
+chr21	21431321	chr21:21431321:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:33:205,0,223	1/1:0,36:37:255,108,0	0/1:16,23:39:255,0,179
+chr21	21436760	chr21:21436760:M	TTTTTTTTTCTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6,1:17:63,0,146,93,140,255	1/2:0,10,21:34:255,255,255,171,0,183	0/1:21,24,0:45:255,0,251,255,255,255
+chr21	21436929	chr21:21436929:M	TTTTTTTTTTTATTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:12,17:29:219,0,130	0/0:34,1:35:0,85,255
+chr21	21437475	chr21:21437475:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,0,4:22:65,116,255,0,255,255	1/2:0,12,6:18:255,156,120,255,0,255	0/2:14,0,4:20:72,116,255,0,255,255
+chr21	21437909	chr21:21437909:M	ATATTATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:44,0:44:0,132,255	0/1:24,10:34:207,0,255	0/0:43,0:43:0,129,255
+chr21	21439123	chr21:21439123:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:29:0,87,255	0/1:14,9:24:174,0,255	0/0:29,0:33:0,95,255
+chr21	21440690	chr21:21440690:M	AAAAAAAAGAAAAGAAAAGAAAAGAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:255,0,255	0/1:17,14:31:255,0,255	0/1:15,19:34:255,0,255
+chr21	21443425	chr21:21443425:M	TTTTTTTTTTCTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:31:242,0,149	0/1:17,16:33:183,0,201	0/1:21,25:46:255,0,244
+chr21	21450290	chr21:21450290:M	GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:25,0:26:0,75,255	0/1:21,20:43:255,0,255
+chr21	21450772	chr21:21450772:M	ATGTATGTATGTATGTATGTAT	<8>	.	.	Motif=ATGT	GT:AD:DP:PL	0/0:15,2:17:0,2,255	0/1:11,5:17:70,0,234	0/0:11,1:12:0,12,246
+chr21	21450794	chr21:21450794:M	ACACACACACACACACACACACACACACACACACACACACA	<11.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,13:26:255,255,255,255,0,255	0/1:0,23,0:30:255,0,10,255,79,255	1/2:0,13,9:22:255,252,213,255,0,255
+chr21	21450959	chr21:21450959:M	ATATATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:23,20:43:255,0,255	0/1:17,30:48:255,0,166	0/1:17,22:39:255,0,204
+chr21	21452169	chr21:21452169:M	CACACACACACACACACACACACACACA	<12>,<13>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,24,18:42:255,255,215,255,0,255	0/1:11,9,0:23:217,0,253,173,192,255	1/2:1,14,11:26:255,153,137,235,0,181
+chr21	21452572	chr21:21452572:M	TATTGTATATATATTGTATTGT	<2.2>	.	.	Motif=TATTG	GT:AD:DP:PL	1/1:0,4:4:111,12,0	.	.
+chr21	21455211	chr21:21455211:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,5:15:248,125,99,144,0,193	0/1:8,6,0:17:76,0,92,118,130,255	1/1:1,12,1:16:204,26,0,216,18,255
+chr21	21460933	chr21:21460933:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,21:42:255,0,255	1/1:1,37:39:255,96,0	0/1:19,15:34:176,0,249
+chr21	21472968	chr21:21472968:M	ACACACACACACACACACACACACACGCACACATACACACACACACAC	<25>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,13:23:169,0,105	0/0:23,1:24:0,53,255	0/1:14,13:30:146,0,183
+chr21	21473301	chr21:21473301:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,10:25:121,0,215	0/0:26,0:26:0,77,255	0/1:16,9:25:96,0,228
+chr21	21473345	chr21:21473345:M	TATATATAATATACAAAATATATGTATAAATATATATATATATATATATTATATATA	<31.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,7:16:179,0,201	0/0:2,0:2:0,6,58	0/1:0,2:4:46,0,13
+chr21	21473904	chr21:21473904:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:24:109,0,181	1/1:1,13:16:205,19,0	0/1:16,7:24:55,0,215
+chr21	21474979	chr21:21474979:M	TATATATATAACACATATATAATACATTATAATACATATATATAATACACATATATAATGCACATATATATATATATA	<38>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,4:5:61,0,4	0/0:8,0:8:0,24,143	0/1:7,2:9:11,0,103
+chr21	21480367	chr21:21480367:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:7:58,0,14	0/0:4,0:4:0,12,66	1/1:0,4:4:68,12,0
+chr21	21488276	chr21:21488276:M	ATTATAATTAATTATAAT	<3.2>	.	.	Motif=ATTATA	GT:AD:DP:PL	1/1:0,44:44:255,132,0	1/1:0,26:26:255,78,0	1/1:0,45:45:255,135,0
+chr21	21495993	chr21:21495993:M	TATATATATATGAAATATATATATAATATATAAAATATATATAT	<24>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,10:15:196,0,76	1/1:0,5:5:117,15,0	0/1:5,3:10:48,0,96
+chr21	21500528	chr21:21500528:M	ATTTTCATTTTCCTTTT	<2.7>	.	.	Motif=ATTTTC	GT:AD:DP:PL	0/1:26,15:41:255,0,255	0/0:48,0:48:0,144,255	0/1:22,22:44:255,0,255
+chr21	21501618	chr21:21501618:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,0,8:28:65,145,255,0,255,255	0/1:13,16,0:29:195,0,142,255,190,255	1/2:5,29,17:51:255,224,255,255,0,255
+chr21	21507789	chr21:21507789:M	AAAAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,1,2:6:32,8,69,0,6,21	0/1:5,7,0:15:187,0,116,200,93,255	0/2:5,0,6:13:70,103,255,0,94,62
+chr21	21508809	chr21:21508809:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,8:9:241,27,0	.
+chr21	21514466	chr21:21514466:M	AAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,68,0	1/1:0,26:26:255,78,0	1/1:0,7:9:190,11,0
+chr21	21522244	chr21:21522244:M	ATATATATGAATACTATATTTATATATAAATATGATTATATAT	<19.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,11:11:255,33,0	1/1:0,2:2:73,6,0	0/1:6,5:11:152,0,126
+chr21	21522613	chr21:21522613:M	TTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<39>,<40>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:57,41,36,6,6,0	1/2:0,3,5:10:228,102,78,51,0,22	0/2:4,0,1:6:10,17,127,0,112,109
+chr21	21524424	chr21:21524424:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:29:0,81,255	0/1:10,17:30:255,0,213	0/0:27,0:28:0,81,255
+chr21	21527114	chr21:21527114:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,3:24:0,14,255	0/1:17,8:26:74,0,221	0/0:25,0:26:0,67,255
+chr21	21531827	chr21:21531827:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:14:0,40,235	0/1:7,4:12:34,0,93	0/0:28,1:31:0,73,255
+chr21	21533649	chr21:21533649:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:31:0,69,255	0/1:13,7:21:61,0,174	0/1:12,10:25:107,0,172
+chr21	21536394	chr21:21536394:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:15,9:25:95,0,189	0/1:10,12:24:166,0,111
+chr21	21540255	chr21:21540255:M	ATATATATATACACATATATATATATACACATATATATACATATATATATAT	<25>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,0:15:0,44,255	0/1:6,3:9:28,0,81	0/1:12,7:19:76,0,168
+chr21	21546804	chr21:21546804:M	TATATATATGTATATAAAAACATGTATGTATATATATGTATATACATACATGTTTATATATATACATATATATA	<23>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,2:7:35,0,121	0/1:1,3:6:66,0,39	0/1:10,4:14:72,0,240
+chr21	21548032	chr21:21548032:M	TGGTGGTGGTGGTGGTGGTGGT	<6.3>	.	.	Motif=TGG	GT:AD:DP:PL	0/0:20,0:22:0,64,255	0/1:11,14:29:202,0,120	0/0:22,0:24:0,70,255
+chr21	21548052	chr21:21548052:M	GTTTTTTTGTTTGTTTGTTTGTT	<7.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:11,9:21:209,0,236	0/0:29,0:29:0,87,255
+chr21	21551647	chr21:21551647:M	ACACACCCACACCACACACACACACACACACACACACACACACA	<19>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/2:16,0,9:26:93,166,255,0,255,221	0/1:7,12,0:21:255,0,157,255,130,255	0/2:17,0,12:29:131,215,255,0,255,220
+chr21	21556370	chr21:21556370:M	TTTTTTTTTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,11:25:135,0,164	0/1:8,17:26:218,0,72	1/1:2,27:30:255,52,0
+chr21	21562032	chr21:21562032:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:16,0:21:0,47,255	0/1:4,9:14:111,0,28	0/0:18,0:18:0,53,255
+chr21	21568386	chr21:21568386:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:32,0,120	0/0:11,0:12:0,32,183	0/0:14,1:16:0,26,223
+chr21	21569748	chr21:21569748:M	CACACACACACACAAGGAACACACACATACACGCACACACACA	<22.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/0:15,0:16:0,47,255	0/1:14,13:27:162,0,182
+chr21	21573511	chr21:21573511:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,1:42:0,95,255	0/1:8,11:20:138,0,84	0/0:23,0:23:0,68,255
+chr21	21574435	chr21:21574435:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/1:23,22:46:255,0,255	0/0:42,0:42:0,124,255
+chr21	21576758	chr21:21576758:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:5:101,60,48,14,0,2	1/2:1,6,3:11:148,42,28,64,0,78	1/2:0,2,3:5:102,49,35,27,0,18
+chr21	21577180	chr21:21577180:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:11,8:20:93,0,132	0/0:17,1:19:0,38,255
+chr21	21578022	chr21:21578022:M	ACACACACACACACACACACACACACACAC	<16>	.	.	Motif=AC	GT:AD:DP:PL	0/0:29,0:31:0,90,255	0/1:19,11:32:108,0,249	0/0:34,0:36:0,105,255
+chr21	21579437	chr21:21579437:M	ATATATATATATACATATA	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/1:15,6:22:114,0,255	0/0:33,0:33:0,99,255
+chr21	21581115	chr21:21581115:M	TTTTTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,12:16:221,255,255,29,47,0	1/2:0,17,5:26:255,80,69,255,0,255	2/2:0,1,12:16:232,239,255,43,17,0
+chr21	21592329	chr21:21592329:M	AAAAAAAAAACAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,106,255	0/1:22,17:39:196,0,255	0/0:42,0:43:0,127,255
+chr21	21599770	chr21:21599770:M	AAAACAAAACAAAAAAAAAC	<4.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:31,0:31:0,93,255	0/0:36,0:36:0,108,255	0/1:25,16:41:255,0,255
+chr21	21603052	chr21:21603052:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,31:32:255,96,0	1/1:0,23:25:255,74,0
+chr21	21603633	chr21:21603633:M	AAAAAAAAAATAGAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:38:255,112,0	0/1:20,24:44:255,0,227	0/1:23,22:45:255,0,255
+chr21	21616069	chr21:21616069:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:40:238,0,255	0/0:36,0:38:0,111,255	0/1:23,16:39:177,0,255
+chr21	21636654	chr21:21636654:M	ATTTATTTATTTATTTA	<5.2>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:27,22:49:255,0,255	0/1:19,15:34:182,0,255
+chr21	21639473	chr21:21639473:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:15,11:29:120,0,200	0/1:14,19:33:249,0,157
+chr21	21642019	chr21:21642019:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,111,255	0/1:11,8:20:148,0,245	0/1:10,5:18:86,0,222
+chr21	21658675	chr21:21658675:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:25:255,69,0	1/1:2,19:23:255,7,0	1/1:1,15:19:255,19,0
+chr21	21678015	chr21:21678015:M	TTTTTTTTTTTTTGTTTTTTTTGTTTTTTTTTTTTTT	<21>,<39>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:5:120,125,138,12,15,0	1/1:0,15,0:16:255,33,0,255,33,255	1/1:0,15,1:16:255,44,0,255,17,255
+chr21	21680621	chr21:21680621:M	TTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:12,3,0	1/1:0,11:12:255,36,0	1/1:0,13:15:255,45,0
+chr21	21689957	chr21:21689957:M	TATTATTATTTTATTA	<5.7>	.	.	Motif=TAT	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,43:43:255,129,0	1/1:0,38:38:255,114,0
+chr21	21691734	chr21:21691734:M	TTTTTTTTTTTTTT	<13>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45,0:47:255,138,0,255,141,255	1/2:1,24,7:34:255,182,129,255,0,255	1/2:1,22,15:40:255,255,255,255,0,255
+chr21	21692585	chr21:21692585:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,38:40:255,81,0	1/1:1,22:23:255,50,0	1/1:1,30:34:255,61,0
+chr21	21698212	chr21:21698212:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,20:23:249,22,0	1/1:1,11:14:124,7,0	1/1:2,12:14:145,11,0
+chr21	21703021	chr21:21703021:M	ATCATCATCATCATCATCA	<5.3>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:0,25:25:255,74,0	1/1:0,43:43:255,127,0
+chr21	21704904	chr21:21704904:M	TTTTCTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,48,0	0/1:5,9:15:222,0,109	0/1:4,15:23:255,0,69
+chr21	21712686	chr21:21712686:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:14,17:31:212,0,158	0/1:15,23:40:255,0,167
+chr21	21717302	chr21:21717302:M	TATACTATACT	<1.2>	.	.	Motif=TATAC	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:24,11:35:97,0,255	0/1:20,19:39:247,0,255
+chr21	21718440	chr21:21718440:M	AGTATAGTATACCATAGTATGTAT	<5>	.	.	Motif=AGTAT	GT:AD:DP:PL	1/1:0,24:24:255,66,0	1/1:0,32:32:255,89,0	1/1:0,32:32:255,89,0
+chr21	21720243	chr21:21720243:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTTCCT	<16.2>,<18.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,11,0:11:255,33,0,255,33,255	1/1:0,14,0:15:255,45,0,255,45,255	1/2:0,5,3:8:210,78,62,130,0,121
+chr21	21722379	chr21:21722379:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,1:19:0,29,255	0/1:13,13:26:255,0,255	0/1:6,10:17:230,0,114
+chr21	21725339	chr21:21725339:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,30	1/1:0,0:2:27,6,0	0/1:1,3:4:82,0,18
+chr21	21742413	chr21:21742413:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:10:203,2,0	0/1:1,1:2:22,0,21	0/1:7,1:9:3,0,164
+chr21	21755217	chr21:21755217:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:14,18:32:228,0,156	0/1:15,13:29:165,0,192
+chr21	21755677	chr21:21755677:M	TTTTTTTTTTTGTTTGTTTTGTTTTGTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:41:0,67,255	0/1:13,8:25:99,0,198	0/1:17,19:43:255,0,242
+chr21	21757626	chr21:21757626:M	AAAAAAAAAAAAAGAAAAAAAGAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:14,9:24:94,0,174	0/1:4,16:20:227,0,13
+chr21	21762446	chr21:21762446:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<6>,<10>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,37,0:37:255,111,0,255,111,255	1/2:0,16,15:31:255,255,255,255,0,255	1/2:0,22,9:32:255,176,185,255,0,255
+chr21	21780037	chr21:21780037:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGT	<20>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,6,0:16:127,0,228,156,168,255	1/2:1,9,8:18:255,119,192,219,0,210	0/2:5,0,7:12:89,123,255,0,88,53
+chr21	21790945	chr21:21790945:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,1,3:7:32,34,98,0,27,42	1/2:2,2,2:8:38,5,37,23,0,63	0/1:2,7,0:10:103,0,5,127,29,210
+chr21	21793477	chr21:21793477:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,1:37:0,89,255	0/1:14,26:44:255,0,139	0/1:14,17:33:213,0,185
+chr21	21809024	chr21:21809024:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:14:255,42,0	1/1:0,10:12:255,35,0	1/1:0,13:13:255,39,0
+chr21	21816049	chr21:21816049:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,22,9:31:255,236,174,255,0,255	0/2:14,1,9:25:185,218,255,0,227,255	0/1:12,20,0:34:255,0,118,255,215,255
+chr21	21831461	chr21:21831461:M	TATATATATATATATATATATATATATATATATATATATATA	<8>,<10>,<14>	.	.	Motif=TA	GT:AD:DP:PL	1/3:0,9,2,10:28:255,255,255,255,255,255,255,0,188,255	1/2:0,10,7,0:18:255,150,101,228,0,174,255,150,228,255	3/3:1,0,0,7:13:255,255,255,255,255,255,2,32,29,0
+chr21	21831902	chr21:21831902:M	ACACACACACACACACACACACACACACACA	<12.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,17:35:255,255,255,255,0,255	0/1:10,8,0:19:194,0,240,219,174,255	0/2:13,0,18:31:236,255,255,0,235,145
+chr21	21849015	chr21:21849015:M	TGTGTGTGTTTATGTGTGTATGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<25.5>,<28.5>,<31.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,5,0:12:255,92,120,184,0,169,255,141,184,255	2/3:1,0,7,1:10:106,133,248,10,38,13,102,209,0,202	1/3:0,9,0,4:13:255,108,83,255,110,255,255,0,255,246
+chr21	21853576	chr21:21853576:M	ACACACACACACACATACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,11:29:49,0,130	0/0:32,0:35:0,95,255	0/1:14,9:30:23,0,159
+chr21	21861251	chr21:21861251:M	ACACACACACACACACAC	<8>,<10>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,14:32:255,255,255,255,0,255	0/2:23,0,16:39:178,255,255,0,255,255	0/1:14,23,0:37:255,0,156,255,226,255
+chr21	21863873	chr21:21863873:M	ACAACAACAACAACAACAACAACAACAACAACAACAACAA	<10>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:9,18:27:255,0,172	0/0:23,0:23:0,69,255	0/1:9,10:20:218,0,203
+chr21	21869562	chr21:21869562:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,18:35:232,0,214	0/0:35,0:37:0,108,255	0/1:6,15:21:210,0,47
+chr21	21870371	chr21:21870371:M	TTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,4,1:7:50,0,19,38,3,140	1/1:0,16,0:18:255,52,0,255,54,255	1/2:0,9,6:18:255,180,179,158,0,255
+chr21	21871318	chr21:21871318:M	ATTATTATTATTATTATTATTATTATTATT	<11>,<12>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,9,0:23:106,0,202,148,255,255	0/2:8,0,2:10:28,35,151,0,142,203	1/2:0,10,11:21:255,202,144,159,0,126
+chr21	21878669	chr21:21878669:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:16,17:33:205,0,186	0/1:17,19:36:243,0,204
+chr21	21886166	chr21:21886166:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:37:0,91,255	0/1:10,12:26:138,0,100	0/0:25,0:33:0,66,255
+chr21	21890012	chr21:21890012:M	TTTTGTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:150,0,185	0/1:16,22:38:255,0,160	0/0:38,0:39:0,114,255
+chr21	21891325	chr21:21891325:M	TTTTTTTTGTTTGTTTGTTTTGTTTTTTGTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,16:30:221,0,181	0/1:11,13:25:163,0,133	0/0:34,0:34:0,100,255
+chr21	21895791	chr21:21895791:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:11:136,0,80	1/1:0,2:6:56,7,0	0/1:5,1:7:16,0,120
+chr21	21900123	chr21:21900123:M	AAAGAAAAAAAAAAAAAGAAAGAAAGAAAG	<6.5>,<7.8>	.	.	Motif=AAAG	GT:AD:DP:PL	2/2:0,0,19:20:247,255,255,55,60,0	2/2:1,0,21:22:248,255,255,48,65,0	1/2:0,13,9:22:255,110,175,234,0,255
+chr21	21900498	chr21:21900498:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:9:116,8,0	0/1:3,3:8:43,0,30	1/1:0,1:1:17,3,0
+chr21	21909098	chr21:21909098:M	ACACACACACACACACACACACAC	<11>,<14>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,34:34:255,255,255,102,102,0	2/2:0,0,28:30:255,255,255,84,90,0	1/2:0,18,12:30:255,255,255,255,0,255
+chr21	21911154	chr21:21911154:M	AAAAAAAAAAAAAAAAAGAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,46,0	1/1:1,11:13:156,13,0	0/1:2,6:8:77,0,10
+chr21	21911395	chr21:21911395:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/0:42,3:45:0,80,255	0/1:14,21:37:255,0,160
+chr21	21912501	chr21:21912501:M	CACACACACACACACACACACACACACACACACACACACACACA	<17>,<23>	.	.	Motif=CA	GT:AD:DP:PL	0/2:16,0,13:30:141,227,255,0,255,205	0/0:15,0,0:18:0,53,255,52,255,255	1/2:2,11,5:21:255,51,110,255,0,255
+chr21	21913199	chr21:21913199:M	TTTTCTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:36:0,105,255	0/0:33,0:37:0,99,255	0/1:22,20:42:255,0,255
+chr21	21913905	chr21:21913905:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:7:87,3,0	0/1:2,6:8:77,0,10	1/1:0,6:7:113,20,0
+chr21	21921722	chr21:21921722:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,38:38:255,112,0	1/1:1,54:55:255,144,0
+chr21	21928854	chr21:21928854:M	ACACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:13:0,38,243	0/0:10,0:10:0,29,177	0/1:16,9:25:91,0,219
+chr21	21930841	chr21:21930841:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,27:28:255,81,0	0/1:9,4:18:64,0,215
+chr21	21931300	chr21:21931300:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,4:4:70,70,70,12,12,0	1/2:1,3,6:10:139,67,82,33,0,21	1/2:0,1,2:3:54,29,26,17,0,8
+chr21	21931502	chr21:21931502:M	ATATATATTATATATAATAATGTAACATATATTATATAGTATATATATATATA	<28.5>,<29.5>,<31.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:0,0,7,5:14:255,239,216,127,125,93,157,87,0,124	2/2:0,0,5,0:5:141,75,60,15,14,0,124,74,15,115	1/1:0,8,0,0:8:186,24,0,119,22,98,201,24,121,228
+chr21	21931554	chr21:21931554:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	<11>,<13>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,17,19:44:255,239,255,255,0,255	2/2:0,0,18:20:236,255,255,55,54,0	0/1:8,8,2:20:196,0,184,174,72,228
+chr21	21944388	chr21:21944388:M	TTTTTCTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,8:20:93,99,255,0,173,134	0/0:9,1,0:11:0,5,244,20,163,151	1/2:0,10,4:14:255,58,27,169,0,130
+chr21	21947321	chr21:21947321:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:31:255,90,0	1/1:0,35:37:255,108,0	1/1:0,34:35:255,103,0
+chr21	21957321	chr21:21957321:M	ATATATATACATATATATATATATATATAT	<16>	.	.	Motif=AT	GT:AD:DP:PL	0/0:23,1:24:0,52,255	0/1:4,7:11:93,0,39	0/1:10,12:23:154,0,126
+chr21	21959696	chr21:21959696:M	AATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,40:40:255,118,0	1/1:0,34:34:255,100,0
+chr21	21963149	chr21:21963149:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:19:255,56,0	1/1:1,27:29:255,65,0	1/1:2,24:27:255,44,0
+chr21	21970357	chr21:21970357:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,23:25:255,72,0	1/1:1,31:33:255,78,0
+chr21	21972019	chr21:21972019:M	TTTTTTTTTTGTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30,0:32:255,96,0,255,94,255	1/1:0,29,1:31:255,90,0,255,73,255	1/2:1,15,14:31:255,193,170,253,0,186
+chr21	21980902	chr21:21980902:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:6:65,0,0	0/1:1,3:5:47,0,3	1/1:0,4:6:97,17,0
+chr21	21986197	chr21:21986197:M	TCTTTCTTTCTTTCTTTCTTCTTT	<7>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:12,7:20:70,0,176	0/0:22,0:22:0,64,255	0/1:12,9:22:96,0,167
+chr21	21986218	chr21:21986218:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:15:0,0,134	0/0:12,0:13:0,35,201	0/1:5,8:14:99,0,48
+chr21	21986630	chr21:21986630:M	TATATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,4:8:56,0,10	0/1:0,1:2:10,0,7	0/0:0,0:2:0,1,2
+chr21	21987890	chr21:21987890:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/0:33,0:34:0,102,255	0/1:15,18:34:255,0,255
+chr21	21994807	chr21:21994807:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>	.	.	Motif=TG	GT:AD:DP:PL	0/0:13,1:15:0,16,205	0/1:6,8:14:95,0,61	0/1:5,11:16:146,0,40
+chr21	21997415	chr21:21997415:M	CTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCT	<22>	.	.	Motif=CT	GT:AD:DP:PL	0/1:12,10:22:123,0,160	1/1:2,19:22:255,27,0	0/0:21,1:22:0,47,255
+chr21	21998954	chr21:21998954:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8,1:20:183,0,234,201,158,255	1/1:1,17,0:22:255,34,0,255,54,255	0/2:14,0,7:26:48,109,255,0,243,225
+chr21	22018550	chr21:22018550:M	GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,10:21:121,0,122	0/1:13,5:19:34,0,172	1/1:1,17:18:255,35,0
+chr21	22019648	chr21:22019648:M	TATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,30:38:255,93,0	1/1:1,19:23:255,40,0	1/1:1,23:25:255,47,0
+chr21	22019664	chr21:22019664:M	TGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:2,36:43:255,65,0	1/1:0,18:18:255,54,0	1/1:0,23:26:255,69,0
+chr21	22027397	chr21:22027397:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:255,38,0	1/1:0,17:18:255,51,0	1/1:0,20:20:255,60,0
+chr21	22027975	chr21:22027975:M	AAAAAAAAAAAAAAAAGAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:22:255,60,0	1/1:1,25:30:255,53,0	1/1:2,27:34:255,31,0
+chr21	22028158	chr21:22028158:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:2,36:40:255,81,0	1/1:0,36:36:255,106,0
+chr21	22037072	chr21:22037072:M	ATTTTTATTTTTATTTTTATTT	<4.7>	.	.	Motif=ATTTTT	GT:AD:DP:PL	1/1:0,29:34:255,61,0	1/1:0,29:33:255,61,0	1/1:0,28:32:255,51,0
+chr21	22038801	chr21:22038801:M	TTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:188,21,0	1/1:0,4:6:147,18,0	1/1:0,5:9:199,26,0
+chr21	22079649	chr21:22079649:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:14,13:29:149,0,167	0/0:34,0:34:0,100,255
+chr21	22085803	chr21:22085803:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,47:49:255,126,0	1/1:0,41:41:255,120,0	1/1:2,45:47:255,102,0
+chr21	22095972	chr21:22095972:M	TTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,16,0:22:255,0,26,207,82,255	1/2:0,5,3:10:228,39,10,82,0,59	1/2:0,13,7:25:255,91,37,166,0,129
+chr21	22107048	chr21:22107048:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,104,0	0/1:20,15:35:168,0,255	1/1:0,44:44:255,130,0
+chr21	22110951	chr21:22110951:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,10:13:173,35,0	.
+chr21	22113151	chr21:22113151:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,62,0	0/1:4,11:15:145,0,25	0/1:10,7:18:82,0,125
+chr21	22115310	chr21:22115310:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:63,11,0	1/1:0,2:2:34,6,0	0/1:3,4:9:57,0,29
+chr21	22133073	chr21:22133073:M	GGGGGGGGGGG	<12>,<13>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,6,0:6:105,18,0,105,18,105	1/2:0,8,3:11:187,50,18,110,0,101	0/1:12,3,0:16:5,0,172,44,214,255
+chr21	22137207	chr21:22137207:M	AAATATAATATATATAAATATAAAT	<4.5>	.	.	Motif=AAATAT	GT:AD:DP:PL	0/1:12,15:27:255,0,237	0/1:18,9:27:154,0,255	0/0:43,0:43:0,129,255
+chr21	22137249	chr21:22137249:M	AAAACAAAAACAAA	<2.5>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,40:40:255,120,0	1/1:0,43:43:255,129,0
+chr21	22156912	chr21:22156912:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17,1:33:217,0,190,255,216,255	0/2:13,1,11:27:127,172,255,0,164,163	0/1:11,26,1:40:255,0,92,255,150,255
+chr21	22165708	chr21:22165708:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:255,199,173,30,29,0	1/2:2,13,8:23:255,97,65,145,0,170	2/2:0,0,5:6:151,109,95,18,17,0
+chr21	22169136	chr21:22169136:M	AAAAAAAAAAAAAAAAAAAAAAA	<18>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,3:4:52,60,92,9,10,0	1/2:0,3,3:7:134,48,68,94,0,85	0/0:9,0,0:12:0,30,255,20,178,148
+chr21	22173482	chr21:22173482:M	ATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,37:39:255,114,0	1/1:2,38:40:255,82,0	0/1:18,24:44:255,0,199
+chr21	22181778	chr21:22181778:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:217,0,180	0/0:27,2:30:0,44,255	0/1:18,15:35:175,0,230
+chr21	22187839	chr21:22187839:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:138,0,160	0/0:19,0:19:0,56,255	0/1:18,9:28:84,0,255
+chr21	22190801	chr21:22190801:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:13:195,21,0	1/1:1,8:9:118,9,0	1/1:0,16:16:255,47,0
+chr21	22227390	chr21:22227390:M	TTTTTTATTTTTTTTTGTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:27:0,61,255	0/0:43,0:44:0,129,255	0/1:21,17:38:205,0,255
+chr21	22232657	chr21:22232657:M	GGAAGGAAGGGAGGAAGGAAGGAAGGAAAAGAAGGAAGGAAGAAAGGAAGGAAAAAAGGAAGGAGGGAGGGAGGGAAGGAA	<33.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,9:9:106,25,0	1/1:0,3:3:35,8,0	1/1:0,2:3:23,5,0
+chr21	22237285	chr21:22237285:M	TCTCTCTCTCTCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:14,11:30:126,0,214	0/1:4,1:8:1,0,73	0/0:23,0:25:0,71,255
+chr21	22237303	chr21:22237303:M	TATATATATATATATTACATATATATATATATATATA	<20.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,18:23:255,32,0	1/1:0,0:1:0,0,0	0/1:12,8:22:138,0,238
+chr21	22237532	chr21:22237532:M	ACACACACACACACATACATATACACACACACACACACACACACACACACACACACA	<23.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:17,0,0:19:0,57,255,57,255,255	0/1:7,7,0:14:168,0,162,189,183,255	0/2:7,0,5:12:106,127,255,0,182,167
+chr21	22238420	chr21:22238420:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,11:13:255,36,0	0/0:1,0:3:0,8,51
+chr21	22258321	chr21:22258321:M	TAGATGATAGCTAGCTAGCTAGCTAGATAGATAGATAGATAGATA	<10.2>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,20:20:255,59,0	1/1:0,6:6:112,18,0
+chr21	22262706	chr21:22262706:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,43:47:255,127,0	0/1:20,17:37:183,0,234	0/1:18,23:41:255,0,197
+chr21	22265996	chr21:22265996:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	1/1:1,12:13:187,21,0	1/1:0,15:15:255,44,0
+chr21	22269977	chr21:22269977:M	TATATATATATATATA	<9>,<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/3:1,13,1,17:32:255,255,255,255,255,255,230,0,239,255	1/2:0,10,7,0:17:255,126,77,152,0,131,255,107,179,255	3/3:0,0,2,15:23:255,255,255,255,255,255,56,50,18,0
+chr21	22271183	chr21:22271183:M	TTTTCTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:7,0:7:0,21,135	0/0:3,0:4:0,11,64	0/1:4,6:11:83,0,45
+chr21	22271870	chr21:22271870:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,20:48:243,0,255	0/1:21,28:49:255,0,228	1/1:1,38:39:255,97,0
+chr21	22277803	chr21:22277803:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:21,31:52:255,0,220	0/0:41,0:41:0,121,255
+chr21	22278107	chr21:22278107:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:30:255,86,0	1/1:0,15:16:255,48,0	1/1:0,14:15:255,45,0
+chr21	22282463	chr21:22282463:M	TCTCTCTCTCTCTCTCTCTCTCTCTC	<17>	.	.	Motif=TC	GT:AD:DP:PL	0/1:22,8:30:127,0,255	0/1:17,18:36:255,0,255	0/1:11,9:20:188,0,242
+chr21	22283049	chr21:22283049:M	TTTTCTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:140,0,86	0/1:3,5:9:68,0,25	0/1:5,14:20:194,0,29
+chr21	22285674	chr21:22285674:M	TATATAGATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,13:33:154,0,255	0/1:23,15:38:160,0,255	0/1:17,20:37:255,0,210
+chr21	22290578	chr21:22290578:M	TGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:25,18:43:255,0,255	0/1:25,31:57:255,0,255	0/1:24,27:52:255,0,255
+chr21	22291414	chr21:22291414:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,9:26:99,0,222	0/1:18,16:34:181,0,218	0/1:12,10:24:120,0,158
+chr21	22294925	chr21:22294925:M	AAAAAAAAAACAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:26:255,0,225	0/1:9,9:18:181,0,191	0/1:7,13:20:255,0,132
+chr21	22295091	chr21:22295091:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:255,30,0	1/1:0,7:8:209,24,0	1/1:0,2:5:98,14,0
+chr21	22295638	chr21:22295638:M	GTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGT	<17>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,5:16:255,89,99,255,0,255	1/2:0,20,14:34:255,236,255,255,0,255	1/2:0,11,10:24:255,189,242,255,0,255
+chr21	22296202	chr21:22296202:M	CATAACATAACATAACATAACATAACATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCAT	<11.6>,<13.6>,<15.6>	.	.	Motif=CATAG	GT:AD:DP:PL	2/3:0,0,8,1:10:255,255,255,22,37,9,240,236,0,231	2/3:0,0,8,2:10:255,255,255,37,67,39,234,229,0,223	1/3:0,11,0,4:15:255,77,109,255,135,255,255,0,255,255
+chr21	22300006	chr21:22300006:M	AATAAATAAATAAATAAATAAATAAATAAA	<10.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,4:4:113,12,0	1/1:0,4:4:113,12,0	1/1:0,10:11:255,33,0
+chr21	22309259	chr21:22309259:M	AATTAATTGATTAATTAATTGTATTAATAATTATTAATAATTATATTAATAATTA	<14.8>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,4:4:65,12,0	1/1:0,9:9:149,26,0
+chr21	22312532	chr21:22312532:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:4,26:32:255,21,0	1/1:3,19:24:255,15,0	1/1:3,35:40:255,55,0
+chr21	22314934	chr21:22314934:M	TATATATATATATATATAATTATATATGTACATATATATA	<18>,<19>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,13,13:26:255,215,176,252,0,176	1/2:0,4,1:5:136,15,3,73,0,58	1/2:0,8,5:13:255,80,56,149,0,112
+chr21	22320057	chr21:22320057:M	ACACACACACACACACACACACACACACACACATATATATATACACATACACATACACACACACACAC	<38>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,4:11:85,0,145	0/1:6,3:9:56,0,142	0/1:1,0:3:6,0,23
+chr21	22320726	chr21:22320726:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,5,5,0:12:255,133,108,148,0,126,244,82,148,229	1/2:0,15,7,0:25:255,188,127,255,0,255,255,115,255,255	1/3:0,10,0,5:16:255,135,102,255,76,255,255,0,255,255
+chr21	22322259	chr21:22322259:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:0,23:23:255,68,0	1/1:2,41:45:255,96,0
+chr21	22326471	chr21:22326471:M	TTTTGTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<38>,<39>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:4:42,0,6,45,18,72	2/2:0,0,2:2:54,39,34,6,6,0	1/2:0,2,3:5:105,52,38,30,0,21
+chr21	22355494	chr21:22355494:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:11:37,68,201,0,102,90	0/1:11,4,0:15:23,0,139,65,151,248	0/2:6,1,4:11:36,50,164,0,69,82
+chr21	22367768	chr21:22367768:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,11,8:22:255,87,79,112,0,165	1/1:3,13,3:19:204,4,0,137,4,204	1/2:0,11,4:19:255,79,42,153,0,143
+chr21	22368161	chr21:22368161:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTGTGTGTGTATGTATGTTTGTGTGTGTGTGTGTG	<34.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,4:11:60,0,44	0/1:3,3:6:33,0,33	0/1:8,5:14:56,0,100
+chr21	22371281	chr21:22371281:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:28:200,0,162	0/0:44,1:47:0,120,255	0/1:28,17:47:185,0,255
+chr21	22386058	chr21:22386058:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,7,4:14:132,38,78,100,0,180	1/2:0,9,8:18:239,129,173,155,0,216	1/2:1,11,7:19:235,102,150,169,0,255
+chr21	22389137	chr21:22389137:M	ATTTATTTATTTATTTATTT	<6>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:21,16:37:181,0,255	1/1:0,29:29:255,86,0
+chr21	22394071	chr21:22394071:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:32:255,95,0	1/1:2,39:42:255,87,0	1/1:1,34:40:255,98,0
+chr21	22397934	chr21:22397934:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,15:17:255,255,255,48,31,0	1/2:2,7,5:16:162,33,45,50,0,100	2/2:0,1,11:14:255,229,197,38,23,0
+chr21	22402360	chr21:22402360:M	TTTTTTTTTTTTTTTATTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,36:40:255,116,0	1/1:0,27:27:255,81,0
+chr21	22409781	chr21:22409781:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<15.2>	.	.	Motif=CCTT	GT:AD:DP:PL	1/1:0,11:13:255,32,0	1/1:0,9:13:217,29,0	1/1:0,18:24:255,55,0
+chr21	22417700	chr21:22417700:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,11:18:171,0,36	1/1:0,16:21:255,50,0	0/1:14,16:33:219,0,149
+chr21	22419763	chr21:22419763:M	ATATATATATATATGTATAT	<22>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:0,6,2:13:153,0,15,140,19,172	2/2:0,0,1:1:12,12,12,3,3,0	1/2:0,3,4:9:123,38,24,84,0,73
+chr21	22420261	chr21:22420261:M	ATGTATGTATTTATGTGTGTAT	<4.5>	.	.	Motif=ATGT	GT:AD:DP:PL	1/1:0,41:42:255,121,0	0/1:12,17:30:221,0,131	1/1:0,55:56:255,162,0
+chr21	22421148	chr21:22421148:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,100,0	0/1:26,20:46:223,0,255	1/1:1,25:26:255,59,0
+chr21	22422148	chr21:22422148:M	ACACACACACACACACACACACACACACACACA	<9.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,36,0:39:255,117,0,255,117,255	1/2:0,9,6:16:255,170,144,234,0,213	1/1:0,38,0:43:255,129,0,255,129,255
+chr21	22422180	chr21:22422180:M	ATATATATATATATA	<3.5>,<9.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,7,0,8:18:255,224,203,255,189,255,255,0,255,255	1/2:0,2,7,1:14:218,156,210,81,0,58,175,131,54,197	3/3:0,0,0,3:3:82,82,82,69,69,62,9,9,9,0
+chr21	22424318	chr21:22424318:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:3,1,26:30:255,255,255,33,69,0	1/2:0,10,13:24:255,188,157,171,0,106	2/2:1,1,25:27:255,255,255,61,61,0
+chr21	22427198	chr21:22427198:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:8:40,0,40	0/0:9,0:9:0,26,136	0/0:4,1:6:0,2,56
+chr21	22431129	chr21:22431129:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,0:5:14,0,100	0/1:4,3:10:114,0,85	0/0:5,0:7:0,15,155
+chr21	22431843	chr21:22431843:M	TTTTATTATCATTTTATTTTATTTTATTTT	<6.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:1,25:26:255,54,0	1/1:0,28:28:255,84,0	1/1:0,30:30:255,90,0
+chr21	22440522	chr21:22440522:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:22:255,45,0	0/1:16,11:30:104,0,218	1/1:1,17:19:255,38,0
+chr21	22445459	chr21:22445459:M	TCTCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,43:45:255,135,0	0/1:19,14:38:255,0,255	1/1:0,36:38:255,114,0
+chr21	22449053	chr21:22449053:M	TTTTTTTCTTTTTTTTGTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:28:255,83,0	0/1:15,10:28:115,0,194	1/1:1,43:44:255,111,0
+chr21	22456607	chr21:22456607:M	GTGTGTGTGTGTGT	<6>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,11:11:139,31,0	0/1:1,3:4:26,0,1	1/1:0,10:10:125,28,0
+chr21	22460603	chr21:22460603:M	ATATATATATATATAATTATATTTAAAAATATAATTATATATAT	<21>,<23>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,6,14:23:165,151,242,61,0,70	1/2:0,2,2:5:32,21,30,21,0,31	1/2:0,4,11:16:123,118,191,40,0,41
+chr21	22461339	chr21:22461339:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:170,18,0	0/1:0,2:3:48,0,4	1/1:0,7:9:216,24,0
+chr21	22481465	chr21:22481465:M	AAAAAAAAAAAAAAAGAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,15:16:255,255,236,48,46,0	2/2:0,1,14:19:255,249,209,47,33,0	1/2:0,3,8:12:216,117,88,36,0,13
+chr21	22508091	chr21:22508091:M	TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:18,0,23	0/0:5,0:5:0,15,83	0/1:5,3:8:28,0,61
+chr21	22511605	chr21:22511605:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,6:19:53,0,168	0/1:8,7:16:73,0,99	1/1:1,11:13:184,20,0
+chr21	22553830	chr21:22553830:M	ACACACACACACACACACATACACACTCATACACACAC	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,27:29:255,86,0	1/1:0,26:26:255,78,0	1/1:0,26:28:255,83,0
+chr21	22556100	chr21:22556100:M	TATATATATATATATATATATATATGTATATATATATGTATATATA	<19>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,28:30:255,89,0	1/1:0,14:14:255,42,0	1/1:0,11:12:255,36,0
+chr21	22558509	chr21:22558509:M	TTTTCTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:136,15,0	1/1:0,7:8:237,24,0	1/1:0,4:6:168,18,0
+chr21	22559635	chr21:22559635:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,4:6:154,68,51,34,0,17	1/2:0,3,5:8:202,82,59,49,0,26	1/2:0,1,3:4:102,50,39,17,0,5
+chr21	22562387	chr21:22562387:M	CACACACACACACACACAAACACACACACACACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,22:24:255,71,0	1/1:0,29:29:255,87,0
+chr21	22562733	chr21:22562733:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:11,4,0	1/1:0,0:2:7,2,0	1/1:0,3:4:91,11,0
+chr21	22563552	chr21:22563552:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,27:31:255,91,0	1/1:0,19:22:255,65,0
+chr21	22564127	chr21:22564127:M	TTTTTTTTTGTTTGTTTTGTTTTG	<5.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,30:30:255,90,0	1/1:0,32:32:255,96,0
+chr21	22567823	chr21:22567823:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,10:11:255,172,142,30,16,0	0/2:1,1,4:6:89,47,46,0,2,12	1/2:0,4,6:10:192,92,64,51,0,33
+chr21	22569707	chr21:22569707:M	AAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7,1:8:207,24,0,129,6,108	1/2:0,3,5:9:215,85,60,60,0,37	1/1:0,11,1:13:255,38,0,220,20,187
+chr21	22570428	chr21:22570428:M	GTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,34:35:255,105,0	1/1:0,39:39:255,117,0	1/1:0,28:29:255,87,0
+chr21	22575672	chr21:22575672:M	ATATATATATATAT	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,16:21:86,27,0	1/1:0,9:10:52,18,0	1/1:0,24:24:138,48,0
+chr21	22578639	chr21:22578639:M	AAAAAAAAAATAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,35:38:255,110,0	1/1:0,36:36:255,106,0
+chr21	22579088	chr21:22579088:M	TTTTTTTTTCTTTTTTTTCTTTTTCTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:1,25:26:255,59,0	1/1:0,21:21:255,62,0
+chr21	22587030	chr21:22587030:M	AAAAAAAAAAAAAGAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:43:255,126,0	1/1:1,26:30:255,67,0	1/1:0,38:39:255,114,0
+chr21	22593282	chr21:22593282:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:33:233,0,160	0/1:11,11:24:122,0,141	0/0:23,1:25:0,55,255
+chr21	22593864	chr21:22593864:M	AAAAAAAAAAAAAAAAAA	<17>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,2,3:10:58,44,114,0,52,162	0/0:2,0,0:3:0,9,46,6,42,57	0/1:11,4,0:16:23,0,158,67,192,255
+chr21	22602555	chr21:22602555:M	TATATATATATATATATATATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:6:139,15,0	1/1:0,6:7:177,21,0	1/1:0,25:25:255,75,0
+chr21	22612048	chr21:22612048:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,10:17:130,0,76	0/1:10,6:18:53,0,130	0/0:13,0:13:0,38,228
+chr21	22615153	chr21:22615153:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,4:6:94,58,52,28,0,13	1/1:0,3,0:4:101,12,0,72,12,62	1/2:0,1,3:5:68,42,39,17,0,5
+chr21	22615924	chr21:22615924:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:36:202,0,251	1/1:0,29:29:255,85,0	0/1:14,18:32:234,0,161
+chr21	22622798	chr21:22622798:M	ACACACACACACACACACACACACACACACA	<20.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,6,0,0:23:129,0,255,177,255,255,177,255,255,255	1/3:0,7,0,3:12:255,85,58,255,51,254,212,0,212,203	0/2:18,0,8,0:27:182,235,255,0,255,255,149,255,255,255
+chr21	22624464	chr21:22624464:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,22:37:255,0,174	1/1:0,37:37:255,109,0	0/1:18,18:37:232,0,222
+chr21	22629244	chr21:22629244:M	TATATATATACATATACACATATATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,15:24:255,0,172	1/1:0,28:28:255,84,0	0/1:7,13:20:255,0,132
+chr21	22631152	chr21:22631152:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23:39:255,0,189	1/1:0,36:36:255,106,0	0/1:25,26:51:255,0,255
+chr21	22633079	chr21:22633079:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,13:38:134,0,255	1/1:1,37:38:255,94,0	0/0:40,2:42:0,87,255
+chr21	22634146	chr21:22634146:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,9:27:86,0,252	1/1:2,24:27:255,44,0	0/0:23,1:26:0,48,255
+chr21	22634315	chr21:22634315:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	<11.5>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:9,11:20:123,0,90	0/0:24,1:25:0,57,255	1/1:0,27:27:255,79,0
+chr21	22634363	chr21:22634363:M	TAGATAGATAGATA	<2.5>,<4.5>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:27,18,0:45:208,0,255,255,255,255	1/2:0,23,19:42:255,255,255,255,0,255	0/0:53,0,0:53:0,156,255,156,255,255
+chr21	22642380	chr21:22642380:M	TTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:19:255,57,0	1/1:1,13:14:255,8,0	1/1:0,31:33:255,98,0
+chr21	22647136	chr21:22647136:M	TTTTCTTTTCTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:30:255,70,0	0/1:16,11:29:128,0,194	1/1:0,17:19:255,55,0
+chr21	22651065	chr21:22651065:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,7:21:255,122,82,114,0,76	1/2:0,12,4:18:255,76,29,201,0,153	2/2:0,0,18:22:255,255,255,55,44,0
+chr21	22651693	chr21:22651693:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,13:16:135,27,0	0/1:14,7:22:21,0,98	0/1:9,6:19:34,0,58
+chr21	22651706	chr21:22651706:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTGTGTGTGTGT	<31.5>,<67.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,0,7:10:96,69,63,27,0,8	0/1:3,3,1:9:86,0,60,86,65,158	2/2:0,0,3:4:38,38,38,8,8,0
+chr21	22651754	chr21:22651754:M	TATATATATATATGTATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,2:2:25,6,0	0/0:10,1:11:0,21,255	1/1:0,3:3:37,8,0
+chr21	22651784	chr21:22651784:M	TGTGTGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,7:7:85,19,0	0/0:13,1:14:0,30,255	1/1:0,3:3:37,8,0
+chr21	22651794	chr21:22651794:M	TATATATATATATA	<5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,3,2:6:53,0,10,41,1,70	0/0:12,0,1:13:0,36,255,26,255,255	2/2:0,0,3:3:37,37,37,8,8,0
+chr21	22651807	chr21:22651807:M	ACACACACACACA	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:47,11,0	0/0:10,2:12:0,12,247	1/1:0,4:4:47,11,0
+chr21	22651863	chr21:22651863:M	ATATATATATA	<4.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,2:6:90,23,11,79,0,194	0/1:13,3,1:17:8,0,190,45,223,255	1/2:0,5,3:8:115,33,18,96,0,241
+chr21	22651885	chr21:22651885:M	ATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,1:18:0,28,255	1/1:0,6:8:124,21,0	0/0:25,1:29:0,58,255
+chr21	22651933	chr21:22651933:M	GTGTGTGTGTGT	<5>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,3,7:10:110,74,65,44,0,54	0/1:7,2,1:10:3,0,77,19,92,220	1/2:0,6,3:9:103,31,14,88,0,141
+chr21	22651944	chr21:22651944:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,2:2:25,6,0	0/0:9,1:11:0,20,246	1/1:0,3:3:36,8,0
+chr21	22651959	chr21:22651959:M	ACACACACACACACACACACACACACACACATACACACA	<14>,<16>,<67.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,4,0,4:8:154,43,31,136,43,127,111,0,93,100	0/1:8,4,0,2:18:76,0,223,73,207,255,87,213,255,255	1/2:1,8,6,4:20:255,114,98,179,0,165,255,95,159,255
+chr21	22675107	chr21:22675107:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<12.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,11:17:255,9,0	1/1:0,13:17:255,43,0
+chr21	22675946	chr21:22675946:M	AAAAAAAAAAAAGAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,21:22:255,46,0	0/1:18,15:34:173,0,218	0/1:16,20:37:255,0,183
+chr21	22680392	chr21:22680392:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:4,26:31:255,10,0	1/1:1,29:31:255,73,0	1/1:3,32:35:255,49,0
+chr21	22702028	chr21:22702028:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,6,78	0/1:4,3:8:39,0,45	0/0:7,1:8:0,6,104
+chr21	22721717	chr21:22721717:M	TTATTATTATTATTATTATTATTATTATTATT	<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:9,10:20:219,0,193	0/0:17,0:17:0,51,255	0/1:10,12:22:255,0,211
+chr21	22742290	chr21:22742290:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:14:28,0,123	0/1:9,3:15:16,0,126	0/0:9,0:10:0,29,161
+chr21	22743177	chr21:22743177:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,60,0	1/1:1,29:34:255,65,0	1/1:0,25:31:255,78,0
+chr21	22771546	chr21:22771546:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,11:12:177,17,0	0/1:1,3:5:48,0,3	1/1:2,9:12:132,0,0
+chr21	22788715	chr21:22788715:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,3,12	1/1:0,5:9:195,24,0	0/0:1,0:1:0,3,31
+chr21	22794798	chr21:22794798:M	AAAGAGAAAGAGAAGGAGACGAGAGAGAGATAGATAGAGAGAGAGAGAGAGAGAAAGACAAAGAAAAAGAAAAAGAAAGAAAAAGA	<13>	.	.	Motif=AAAGAG	GT:AD:DP:PL	1/1:0,3:4:68,9,0	1/1:0,7:9:171,24,0	1/1:0,4:7:84,7,0
+chr21	22800510	chr21:22800510:M	TATATATACATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:4,9:16:239,0,110	0/0:15,0:21:0,63,255	0/1:12,5:19:116,0,255
+chr21	22800534	chr21:22800534:M	TTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,0,2:17:27,37,255,0,255,255	1/2:0,3,5:10:201,70,47,42,0,17	0/2:6,1,7:16:165,81,214,0,141,132
+chr21	22807992	chr21:22807992:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/0:21,1:25:0,52,255	0/0:21,1:23:0,50,255	0/1:16,8:24:70,0,212
+chr21	22810958	chr21:22810958:M	GAAGGAAGGAAAGAAGGAAGGAAGGGAGGGAGGGAGGGCAGAGAGAAAGAAGGAAGGGAGGAAGGAAGGAAGGAAG	<20>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,3:3:43,9,0	0/0:3,0:4:0,11,54	1/1:0,6:9:84,17,0
+chr21	22815228	chr21:22815228:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,35:36:255,255,255,106,108,0	1/2:1,21,16:39:255,255,255,255,0,255	2/2:1,0,38:39:255,255,255,96,114,0
+chr21	22817959	chr21:22817959:M	AGAGAGAGAGAGA	<8>,<9.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,18,8:26:255,145,68,255,0,247	0/1:17,20,8:46:255,0,169,154,156,255	1/1:1,23,4:34:255,75,0,255,24,255
+chr21	22825191	chr21:22825191:M	TATATATATATATATATATATATATATATAT	<7.5>,<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,25,20:45:255,255,225,255,0,255	0/2:5,1,17:24:255,255,255,0,123,87	1/2:0,19,22:41:255,255,255,255,0,211
+chr21	22825362	chr21:22825362:M	ACACACACACACACACACACACACACACACA	<16.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,15,10:28:255,255,232,253,0,255	0/2:11,0,8:21:188,223,255,0,198,255	1/2:1,14,10:25:255,247,220,229,0,255
+chr21	22825758	chr21:22825758:M	ACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,26:52:255,0,255	0/1:19,21:40:255,0,228	0/1:23,20:43:252,0,255
+chr21	22832286	chr21:22832286:M	AAAAAACAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:38:232,0,255	0/1:17,18:35:221,0,201	0/1:23,20:43:246,0,255
+chr21	22832328	chr21:22832328:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	0/1:26,22:49:255,0,255	1/1:1,39:40:255,100,0
+chr21	22834374	chr21:22834374:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,19:21:255,25,0	0/0:24,0:24:0,70,255	1/1:1,20:21:255,44,0
+chr21	22837419	chr21:22837419:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,13:26:112,0,66	0/1:8,14:28:129,0,46	0/0:15,2:17:0,22,162
+chr21	22845624	chr21:22845624:M	ATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,15:31:193,0,210	0/1:26,13:41:121,0,255	1/1:0,40:40:255,118,0
+chr21	22879455	chr21:22879455:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:9,0,27	0/1:7,2:11:13,0,98	1/1:0,8:10:158,29,0
+chr21	22886743	chr21:22886743:M	TATATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:10:105,26,0	.	.
+chr21	22889371	chr21:22889371:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,23:42:255,0,232	0/1:25,19:44:208,0,255	1/1:1,35:36:255,88,0
+chr21	22889807	chr21:22889807:M	GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTATGTGTATGTG	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,12:25:150,0,170	0/1:10,14:24:177,0,106	0/1:18,15:33:177,0,232
+chr21	22890571	chr21:22890571:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAA	<34>,<36>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,8,3,0:15:110,29,43,101,0,177,136,45,199,255	0/1:3,7,1,0:15:67,0,20,84,21,174,96,42,194,244	2/3:1,0,6,3:11:118,139,205,28,39,14,54,83,0,68
+chr21	22898463	chr21:22898463:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,20:30:255,0,101	0/1:14,14:29:175,0,166	1/1:0,25:26:255,76,0
+chr21	22899484	chr21:22899484:M	TCTATATATCTATCTATCTATCTATCTATCTATCTATCGATCTATCTATCTACCTATC	<15.5>,<16.5>,<17.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:3,6,3,0:12:65,0,1,19,0,66,67,28,95,177	1/2:0,5,6,0:11:151,65,36,43,0,25,120,51,55,142	1/3:5,6,0,5:18:126,69,84,67,68,140,9,0,108,153
+chr21	22902958	chr21:22902958:M	AAAAAAAAAAAAAAAAAAAGAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,93	0/0:1,0:1:0,3,17	0/1:2,5:7:65,0,14
+chr21	22903820	chr21:22903820:M	ATAGATAGATAGATAGATAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAG	<13.8>,<16.8>	.	.	Motif=ATAG	GT:AD:DP:PL	1/2:0,15,3:18:255,81,36,255,0,255	1/2:0,9,7:16:255,187,160,235,0,218	1/1:0,19,0:19:255,57,0,255,57,255
+chr21	22905669	chr21:22905669:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:0,37:37:255,109,0	1/1:0,28:28:255,83,0
+chr21	22906103	chr21:22906103:M	ATATATATATATATATATATAT	<11.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,17,0,6:30:210,148,121,159,78,255,87,0,255,255	1/2:2,7,10,0:21:214,178,165,14,0,166,131,115,211,255	1/3:0,9,0,9:25:241,202,189,139,99,255,49,0,220,255
+chr21	22924336	chr21:22924336:M	AAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:210,26,0	0/1:1,1:2:22,0,23	1/1:0,5:10:201,27,0
+chr21	22924349	chr21:22924349:M	ATATATATATATATATATATA	<11>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:10,0,10:21:199,199,245,0,85,196	0/2:2,0,0:5:6,10,22,0,17,38	1/2:1,4,7:12:170,131,117,25,0,69
+chr21	22935687	chr21:22935687:M	TTTTATTTTAT	<1.4>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,2:3:54,6,0	1/1:0,3:3:81,9,0	.
+chr21	22935695	chr21:22935695:M	TATATATATATATATATATATATATATATATCTAGTATATATA	<18.5>,<19.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/3:0,9,0,7:17:255,115,173,255,202,255,255,0,158,248	1/3:0,0,0,1:2:24,16,26,26,29,38,11,0,10,8	2/3:0,0,5,1:6:143,96,94,16,28,13,135,81,0,138
+chr21	22940332	chr21:22940332:M	TACATAGACTATATATATATATATACATATACA	<5.2>	.	.	Motif=TACATA	GT:AD:DP:PL	1/1:0,32:33:255,96,0	1/1:0,29:29:255,87,0	0/1:23,17:40:255,0,255
+chr21	22950542	chr21:22950542:M	TTTTTTTTTTTTTTT	<13>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,27:28:255,255,255,64,84,0	2/2:1,0,23:28:255,255,255,64,83,0	1/2:0,19,18:39:255,255,255,255,0,255
+chr21	22951905	chr21:22951905:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/0:30,0:32:0,91,255	0/1:13,27:43:255,0,121
+chr21	22952682	chr21:22952682:M	TGTGTGTGTGT	<3.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,39:39:255,117,0	0/1:19,13:32:255,0,255
+chr21	22952822	chr21:22952822:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<19.5>,<20.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,23,0:24:255,67,0,255,68,255	1/1:1,18,0:22:255,10,0,255,57,255	1/2:1,7,12:21:255,196,157,88,0,78
+chr21	22972340	chr21:22972340:M	ATATATACATATATATAT	<12.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,5,12,8:30:255,217,140,98,0,23,203,18,9,146	1/2:0,3,5,3:13:255,88,52,55,0,19,112,11,20,85	1/3:0,10,0,11:25:255,253,198,248,132,189,215,0,109,162
+chr21	22972357	chr21:22972357:M	TTTTTTTTTTTTTTTT	<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,9,7:20:255,177,163,117,0,233	0/2:6,0,5:12:112,129,197,0,84,144	1/1:1,23,0:31:255,65,0,255,84,255
+chr21	22976433	chr21:22976433:M	TAGATAGATAGATAGATAGATAGATAG	<9.8>,<10.8>	.	.	Motif=TAGA	GT:AD:DP:PL	1/2:0,14,10:24:255,179,110,250,0,182	2/2:0,0,16:16:255,255,255,48,47,0	1/1:0,19,0:19:255,57,0,255,56,255
+chr21	22977752	chr21:22977752:M	ACACACACACACACACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,12:31:123,0,220	0/1:15,8:23:68,0,186	0/1:13,7:20:63,0,167
+chr21	22991104	chr21:22991104:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,80,0	1/1:0,33:35:255,99,0	0/1:18,9:31:185,0,255
+chr21	23011953	chr21:23011953:M	AGAGAGACAGAGAGAGGAGGGAGAGAGAGAGAGAGAGGAGAGAG	<24>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,18:19:255,54,0	1/1:0,19:19:255,57,0	0/1:14,6:20:109,0,255
+chr21	23012986	chr21:23012986:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,8:16:112,0,48	0/1:6,2:8:10,0,79	0/1:4,3:8:38,0,47
+chr21	23016025	chr21:23016025:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,16:34:202,0,209	0/1:23,11:36:109,0,255	1/1:1,42:46:255,116,0
+chr21	23016132	chr21:23016132:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,13:41:127,0,255	0/1:14,18:32:230,0,157	0/1:24,24:48:255,0,255
+chr21	23017712	chr21:23017712:M	TTTTTTTTTTTGTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,10:24:255,255,223,255,0,255	1/2:0,16,11:30:255,255,255,255,0,255	0/1:17,10,0:28:239,0,255,255,255,255
+chr21	23019855	chr21:23019855:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,17:43:199,0,255	0/1:16,19:36:240,0,176	0/0:42,0:44:0,129,255
+chr21	23020514	chr21:23020514:M	AAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,10:24:76,0,92	0/1:19,6:30:7,0,194	0/0:32,0:37:0,91,255
+chr21	23021316	chr21:23021316:M	CCCCCCCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	2/2:0,0,3:3:94,56,48,9,9,0	1/1:0,5,0:6:175,18,0,106,17,90	2/2:0,0,4:6:138,76,62,16,4,0
+chr21	23022631	chr21:23022631:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,42:43:255,108,0	1/1:0,46:46:255,135,0	0/1:19,23:42:255,0,231
+chr21	23028073	chr21:23028073:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,6,8:14:255,116,98,103,0,63	1/2:0,9,4:14:255,55,26,156,0,120	0/1:7,6,0:13:130,0,159,100,117,183
+chr21	23029660	chr21:23029660:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:34,0,25	.	1/1:0,3:3:50,9,0
+chr21	23032661	chr21:23032661:M	TTTGTTTTTCTGTTTTTTGTTTGTTTGTTTGTTT	<6.5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:2,0:4:0,12,76	0/1:3,3:11:79,0,69	1/1:0,4:4:90,12,0
+chr21	23032878	chr21:23032878:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,1,15:24:224,209,255,0,101,63	0/2:10,1,13:24:169,175,255,0,156,106	1/2:0,20,13:33:255,199,139,255,0,255
+chr21	23033778	chr21:23033778:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:35,15:50:133,0,255	0/0:44,0:44:0,129,255	0/0:52,1:53:0,138,255
+chr21	23036584	chr21:23036584:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,3,6:19:120,60,181,0,122,221	0/2:9,1,6:18:119,87,215,0,156,231	1/2:0,4,8:12:255,141,108,60,0,36
+chr21	23055398	chr21:23055398:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,34:34:255,100,0	0/1:9,27:36:255,0,60
+chr21	23055425	chr21:23055425:M	AGAAAAGAAAAAAAA	<2.8>	.	.	Motif=AGAAA	GT:AD:DP:PL	1/1:0,32:32:255,94,0	1/1:0,32:33:255,97,0	1/1:1,28:30:255,61,0
+chr21	23056893	chr21:23056893:M	CTTTCTTTCTTTCTTT	<5>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:17,0:17:0,47,217	0/0:18,0:18:0,50,224	0/1:8,11:20:95,0,45
+chr21	23056906	chr21:23056906:M	TTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:33,3,0	1/1:0,3:5:92,9,0	0/1:11,2:13:22,0,255
+chr21	23062061	chr21:23062061:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:132,15,0	1/1:0,5:6:139,7,0	0/1:7,3:11:56,0,192
+chr21	23064939	chr21:23064939:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:13:0,38,217	0/0:16,1:19:0,39,255	0/1:3,3:9:26,0,53
+chr21	23071073	chr21:23071073:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,50:51:255,132,0	1/1:0,36:36:255,106,0	1/1:0,45:45:255,133,0
+chr21	23072542	chr21:23072542:M	TTTTTTTTTTTTTTT	<16>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,15,0:20:255,227,182,43,21,0,245,180,40,222	1/2:1,7,5,0:13:170,54,31,63,0,70,148,55,104,221	2/3:0,0,8,6:14:255,252,222,84,82,43,110,89,0,71
+chr21	23074392	chr21:23074392:M	AAATTAAATTAATAAATTAAATTATTATTAATTAATTAAATTA	<7.8>	.	.	Motif=AAATT	GT:AD:DP:PL	1/1:0,20:25:255,62,0	1/1:0,10:12:255,31,0	1/1:0,11:14:255,33,0
+chr21	23081511	chr21:23081511:M	TTTGTTTGTTTGCTTGTTTGTTTTTTGT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/0:27,0:27:0,81,255	0/1:19,18:37:255,0,255
+chr21	23083054	chr21:23083054:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:34:0,100,255	0/0:30,0:31:0,91,255	0/1:19,22:43:255,0,240
+chr21	23086950	chr21:23086950:M	TTTTTCTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:29:0,84,255	0/0:18,0:19:0,55,255	0/1:15,11:27:105,0,182
+chr21	23087957	chr21:23087957:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,93,0	1/1:2,24:28:255,46,0	1/1:1,40:43:255,108,0
+chr21	23088060	chr21:23088060:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:45,1:46:0,117,255	0/1:16,14:30:168,0,206
+chr21	23098465	chr21:23098465:M	ACACACACACATACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:39,0:39:0,115,255	0/1:15,19:34:255,0,183
+chr21	23101985	chr21:23101985:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,63,0	1/1:0,14:16:255,42,0	0/1:10,8:23:167,0,209
+chr21	23105277	chr21:23105277:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,48:49:255,144,0	1/1:0,28:30:255,87,0	0/1:24,26:51:255,0,255
+chr21	23107329	chr21:23107329:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:38,0:38:0,112,255	0/1:21,27:48:255,0,253
+chr21	23115298	chr21:23115298:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,26:28:255,83,0	1/1:0,28:32:255,94,0
+chr21	23125620	chr21:23125620:M	TTTTTCTTTTTTTTTGTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,19:28:255,0,91	1/1:1,36:37:255,91,0	0/1:21,25:46:255,0,255
+chr21	23128903	chr21:23128903:M	TTTTGTTTTTATTTTGTTTTGTTTTGTTTTGTTTTTGTTTT	<10.2>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:15,8:23:145,0,255	1/1:0,20:20:255,60,0	0/1:8,7:15:145,0,170
+chr21	23139975	chr21:23139975:M	AAAAAAATAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,10:27:112,0,244	1/1:0,39:39:255,115,0	0/1:16,24:41:255,0,186
+chr21	23151602	chr21:23151602:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,3:12:19,0,118	0/0:18,0:20:0,58,255	0/1:11,4:17:21,0,165
+chr21	23169907	chr21:23169907:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,14:38:153,0,255	1/1:0,34:35:255,102,0	0/1:28,13:41:118,0,255
+chr21	23173559	chr21:23173559:M	TATATATATATATATATATATATA	<14>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:13:233,24,0	1/1:0,0:2:30,6,0	1/1:0,3:5:88,9,0
+chr21	23198691	chr21:23198691:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGTTTTTGTGTGTGTGTG	<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,9:13:212,0,69	1/1:0,22:22:255,66,0	0/1:8,9:18:208,0,164
+chr21	23198925	chr21:23198925:M	AACAACAACAACAA	<3.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:17,22:39:255,0,255	1/1:0,34:34:255,102,0	0/1:18,20:38:255,0,255
+chr21	23204441	chr21:23204441:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<20>,<23>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,6,3:9:219,74,56,145,0,136	1/1:0,1,0:1:28,3,0,28,3,28	.
+chr21	23222767	chr21:23222767:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:29:255,85,0	1/1:0,24:24:255,70,0	1/1:3,26:32:255,40,0
+chr21	23225544	chr21:23225544:M	TATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,37:38:255,102,0	1/1:0,19:19:255,57,0	1/1:0,28:28:255,84,0
+chr21	23226847	chr21:23226847:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:33:185,0,240	1/1:0,40:40:255,118,0	0/1:17,29:47:255,0,183
+chr21	23231341	chr21:23231341:M	GCTAAGCTAAG	<1.8>	.	.	Motif=GCTAA	GT:AD:DP:PL	0/1:19,24:43:255,0,255	0/0:49,0:49:0,147,255	0/1:16,27:43:255,0,255
+chr21	23242236	chr21:23242236:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<13>,<14>,<16>	.	.	Motif=AG	GT:AD:DP:PL	1/3:0,12,5,4:22:255,48,53,108,20,83,255,0,68,255	2/3:0,0,16,6:23:255,222,253,59,105,48,255,152,0,241	1/2:0,13,12,5:33:255,101,85,104,0,55,255,34,51,255
+chr21	23242269	chr21:23242269:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,5:16:84,0,231	1/1:0,19:26:255,44,0	0/1:12,4:20:65,0,255
+chr21	23243414	chr21:23243414:M	TATATTTATATGTGTAAATGTATATATATATTTATATGTGTAAATGTATATATATATTTATAT	<2.2>,<6.2>	.	.	Motif=TATATT	GT:AD:DP:PL	1/2:1,9,4:24:255,153,124,255,0,255	1/2:0,1,3:6:164,94,85,70,0,60	1/2:3,5,6:20:255,173,210,223,0,255
+chr21	23257660	chr21:23257660:M	ATATATATATA	<4.5>,<7.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,1,20:25:255,255,255,45,32,0	1/2:0,11,17:33:255,255,255,113,0,192	2/2:0,1,15:21:255,255,255,35,35,0
+chr21	23257670	chr21:23257670:M	ACACACACACACACACACACACACACACACACACACACACACACATATACACACACACATATATATACACACACACACACACACACA	<41.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:6:96,15,0	1/1:0,3:4:61,9,0	0/1:0,0:1:0,0,0
+chr21	23266223	chr21:23266223:M	ACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:3,19:22:255,15,0	1/1:1,24:25:255,57,0	1/1:0,8:9:130,23,0
+chr21	23273075	chr21:23273075:M	ATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	1/1:5,36:41:255,26,0	1/1:2,48:51:255,114,0	1/1:1,48:50:255,129,0
+chr21	23274906	chr21:23274906:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12,0:14:209,23,0,244,39,255	1/1:0,11,0:13:209,37,0,239,38,255	1/2:4,4,7:15:90,61,161,10,0,82
+chr21	23275272	chr21:23275272:M	GTGCACGTGCAC	<1.7>	.	.	Motif=GTGCAC	GT:AD:DP:PL	1/1:0,9:9:234,27,0	1/1:0,14:14:255,42,0	0/1:19,5:24:58,0,255
+chr21	23275281	chr21:23275281:M	CACACACACACACACACACACACACACACACACACACGCACA	<15>,<17>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,42:45:255,255,255,135,129,0	2/2:0,0,26:26:255,255,255,78,78,0	1/2:0,17,16:34:255,255,255,255,0,255
+chr21	23282834	chr21:23282834:M	TTATTTTATTTTTTTTA	<3.6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:39,0:39:0,117,255	0/0:18,0:18:0,54,255	0/1:20,18:38:255,0,255
+chr21	23284448	chr21:23284448:M	ACACACACACACACACACACACACACACA	<12.5>,<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39,2:42:255,118,0,255,87,255	1/1:0,39,2:42:255,120,0,255,90,255	1/2:1,22,13:38:255,156,111,255,0,254
+chr21	23286586	chr21:23286586:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:39:255,95,0	1/1:1,44:45:255,115,0	1/1:0,43:44:255,129,0
+chr21	23291206	chr21:23291206:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:12:86,0,34	1/1:1,7:8:98,7,0	1/1:1,4:6:58,0,0
+chr21	23296677	chr21:23296677:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/0:26,3:29:0,32,255	0/1:20,30:50:255,0,222
+chr21	23297320	chr21:23297320:M	TAGGTAGGTAGGTAGGTAGGTAGGTAGGTAG	<6.8>	.	.	Motif=TAGG	GT:AD:DP:PL	1/1:0,28:29:255,83,0	1/1:1,30:34:255,80,0	1/1:0,19:26:255,63,0
+chr21	23297348	chr21:23297348:M	TAGATAGATAGATAGATAGAAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGAT	<16.8>,<19.8>	.	.	Motif=TAGA	GT:AD:DP:PL	0/2:5,0,4:9:81,98,166,0,77,108	0/0:16,0,0:17:0,49,254,48,255,255	1/2:0,5,6:11:205,147,138,76,0,110
+chr21	23298313	chr21:23298313:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:13:179,20,0	1/1:1,10:12:161,18,0	0/1:8,8:19:107,0,86
+chr21	23299937	chr21:23299937:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:1,38:41:255,102,0	1/1:2,29:32:255,58,0
+chr21	23302016	chr21:23302016:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:15:0,43,252	0/1:4,3:8:38,0,45	0/1:4,4:10:62,0,41
+chr21	23302187	chr21:23302187:M	TTTTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:175,21,0	1/1:0,6:6:179,18,0	1/1:0,9:9:255,27,0
+chr21	23313960	chr21:23313960:M	ATGTATGTATGTATGTATGTATGTATGTATGTAT	<9.5>	.	.	Motif=ATGT	GT:AD:DP:PL	0/0:11,2:23:0,30,168	0/1:7,6:17:25,0,63	0/1:6,10:22:67,0,39
+chr21	23313991	chr21:23313991:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTGTCTGTCTAGCTATC	<15.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:8,6:14:106,0,162	1/1:0,18:18:255,54,0	0/0:14,0:14:0,42,255
+chr21	23317226	chr21:23317226:M	ATATTATATTATATTATATTATA	<7.6>,<8.6>	.	.	Motif=ATATT	GT:AD:DP:PL	1/2:0,10,12:22:255,231,170,193,0,131	2/2:0,0,3:3:90,63,55,9,9,0	0/1:24,9,0:33:169,0,255,168,255,255
+chr21	23317324	chr21:23317324:M	ACACACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:26,2:28:0,44,255	0/0:23,1:24:0,52,255	0/1:8,13:21:178,0,85
+chr21	23319544	chr21:23319544:M	ATATATATATATGTATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,51:51:255,150,0	1/1:0,42:42:255,124,0
+chr21	23337081	chr21:23337081:M	CTCTTCTCTCTCTCTCTCTCTGTCTTTCTCTCT	<15.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,23:25:255,66,0	1/1:0,35:41:255,103,0	1/1:0,39:43:255,112,0
+chr21	23344054	chr21:23344054:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:9:122,9,0	0/1:3,2:6:19,0,35	1/1:0,4:5:69,12,0
+chr21	23347928	chr21:23347928:M	ATATATATATATATATATATATATA	<10.5>,<14.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:1,9,2,11:26:255,255,255,255,129,255,218,0,239,230	1/2:0,15,2,0:18:255,47,6,255,0,255,255,26,255,255	2/3:0,0,7,7:14:255,255,255,96,96,54,94,96,0,54
+chr21	23348086	chr21:23348086:M	GTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,8:19:196,0,253	0/1:11,10:24:255,0,238	0/0:23,0:24:0,72,255
+chr21	23349529	chr21:23349529:M	ATATATATATACATATATATATACACACATATATAATATAAATATATATTTATAATTATATAAATATATA	<5>,<21.5>,<22.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,2,5,6:14:248,198,217,62,34,55,48,20,0,41	1/2:1,3,3,0:7:123,48,64,53,0,69,94,41,78,111	1/3:0,2,0,10:12:255,246,240,191,140,163,51,0,49,21
+chr21	23350532	chr21:23350532:M	TATATTTATAGTTATATGAATATATCTAATATATATTTATAGTTATAT	<2.8>	.	.	Motif=TATATT	GT:AD:DP:PL	0/1:8,13:21:255,0,129	.	0/1:2,5:7:123,0,27
+chr21	23355503	chr21:23355503:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,56,0	1/1:2,9:12:130,1,0	1/1:0,16:17:255,50,0
+chr21	23356968	chr21:23356968:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,1:12:0,6,208	0/0:11,1:15:0,5,255	0/1:12,5:19:82,0,252
+chr21	23367655	chr21:23367655:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:17,1,13,0:31:255,220,255,0,255,255,248,255,255,255	1/2:0,10,12,0:22:255,210,146,176,0,111,255,177,174,255	0/3:5,1,0,13:19:184,205,255,188,255,255,0,63,79,37
+chr21	23371763	chr21:23371763:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<25>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:11,17,56,0,17,11	1/2:0,4,3:8:162,49,70,122,0,113	0/2:1,0,0:3:16,21,51,0,17,8
+chr21	23385554	chr21:23385554:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,43:43:255,127,0	1/1:0,55:55:255,162,0
+chr21	23388243	chr21:23388243:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:31:0,90,255	0/1:15,10:25:228,0,255	0/0:33,1:42:0,87,255
+chr21	23396673	chr21:23396673:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:18,0,4:22:49,73,255,0,255,255	0/0:35,1,0:36:0,88,255,105,255,255	1/2:0,16,14:30:255,253,170,250,0,208
+chr21	23401019	chr21:23401019:M	AAAAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,16:29:243,0,82	0/0:33,3:36:0,53,255	1/1:1,20:22:255,46,0
+chr21	23401344	chr21:23401344:M	TTAAAATTAAAA	<1.3>	.	.	Motif=TTAAAA	GT:AD:DP:PL	0/1:15,5:20:56,0,255	0/0:20,1:22:0,43,255	0/0:17,0:18:0,54,255
+chr21	23404278	chr21:23404278:M	CTTTTCTTTTTCCTTTT	<2.2>	.	.	Motif=CTTTTC	GT:AD:DP:PL	0/1:22,15:37:255,0,255	0/1:19,6:25:79,0,255	0/1:18,11:29:189,0,255
+chr21	23404291	chr21:23404291:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,12:24:255,186,152,199,0,134	2/2:1,1,21:23:255,255,255,50,50,0	1/2:1,15,14:30:255,193,173,250,0,181
+chr21	23404753	chr21:23404753:M	AACAAACAAACAAACAAACAAACAAACAAAACAAACAAACAAAAAACCAAAGCCAAAACAAACAAACAAACAAAAAACA	<18.8>	.	.	Motif=AACA	GT:AD:DP:PL	1/1:0,11:11:211,33,0	1/1:0,10:10:180,29,0	1/1:0,18:18:255,53,0
+chr21	23418946	chr21:23418946:M	AAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,22:33:255,0,108	0/0:27,0:28:0,82,255	0/1:11,9:21:110,0,139
+chr21	23419977	chr21:23419977:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,16:19:255,1,0	0/1:2,1:3:16,0,43	1/1:0,9:9:236,27,0
+chr21	23424170	chr21:23424170:M	AATAATAATAATAATAATAATAATAATAATAATAATAATA	<10.3>,<12.3>,<15.3>	.	.	Motif=AAT	GT:AD:DP:PL	1/3:0,10,0,8:18:255,222,195,255,225,255,255,0,255,255	1/1:0,11,0,0:11:255,33,0,255,33,255,255,33,255,255	2/3:0,0,13,6:19:255,255,255,165,169,130,237,255,0,255
+chr21	23428356	chr21:23428356:M	AAAAAAAAAAAAAAAAAAACAAAAAAAAA	<23>,<28>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:3:47,54,74,9,9,0	1/2:0,11,6:17:255,98,124,255,0,255	.
+chr21	23430740	chr21:23430740:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<17.5>,<22.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,6,1,5:13:255,255,255,121,136,115,255,255,111,255,157,170,0,145,155	0/1:3,9,0,1,2:15:220,0,66,233,93,255,220,24,255,245,181,40,255,205,255	2/3:0,0,10,8,0:18:255,255,255,97,215,185,255,255,0,240,255,255,215,255,255
+chr21	23436375	chr21:23436375:M	CACACACATGCACACACACACACACACACACACACACAC	<18.5>,<22.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,4,3:8:170,164,163,30,20,14,41,31,0,25	2/3:0,0,1,1:2:51,52,53,11,11,5,11,11,0,5	1/3:1,3,0,3:8:104,82,83,64,42,124,22,0,92,82
+chr21	23436417	chr21:23436417:M	ATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:11:138,26,0	1/1:0,1:2:15,3,0	1/1:0,1:2:15,3,0
+chr21	23436626	chr21:23436626:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTCTCTCCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	<33.5>,<35.5>	.	.	Motif=TC	GT:AD:DP:PL	0/2:5,0,4:9:43,68,173,0,72,60	1/2:0,3,2:7:84,32,35,66,0,85	0/0:4,0,0:4:0,12,68,12,68,68
+chr21	23437627	chr21:23437627:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,24:49:255,0,255	0/1:20,22:43:255,0,255	0/1:18,20:42:255,0,255
+chr21	23439124	chr21:23439124:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,34:39:255,77,0	1/1:1,35:39:255,94,0	0/1:17,20:38:255,0,191
+chr21	23439503	chr21:23439503:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,84,0	1/1:0,45:46:255,138,0	0/1:10,21:34:255,0,182
+chr21	23441622	chr21:23441622:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,3,6:9:241,238,236,102,102,77,52,52,0,25	2/3:0,0,5,9:15:255,255,255,156,156,115,83,83,0,39	1/3:0,5,2,6:14:255,182,163,211,67,185,148,0,110,124
+chr21	23447303	chr21:23447303:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,26:52:255,0,255	0/1:26,18:45:187,0,255	1/1:2,35:38:255,75,0
+chr21	23449337	chr21:23449337:M	TATTTATTTATTT	<2.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/0:54,0:54:0,160,255	0/0:35,0:35:0,103,255	0/1:26,19:45:234,0,255
+chr21	23450276	chr21:23450276:M	ATATATATATATATATATATGTATAT	<15>,<19>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,16,9:27:255,241,201,255,0,255	1/2:0,6,1:8:198,40,22,163,0,163	2/2:0,0,2:3:62,62,62,6,6,0
+chr21	23457242	chr21:23457242:M	AAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:90,0,8	0/1:3,9:13:189,0,37	1/1:1,9:10:200,4,0
+chr21	23457561	chr21:23457561:M	TTTTTTTTTTTTTT	<13>,<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,10,0,3:15:255,124,94,255,124,255,183,0,255,255	1/3:2,22,0,6:32:255,153,115,255,184,255,255,0,255,255	2/3:1,0,12,5:19:255,255,255,160,176,140,196,255,0,255
+chr21	23469329	chr21:23469329:M	AAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:17:83,0,102	0/0:12,0:14:0,38,217	1/1:2,14:16:214,11,0
+chr21	23470007	chr21:23470007:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:17,10:28:91,0,224	0/0:25,3:28:0,28,255
+chr21	23475349	chr21:23475349:M	ATATATATATATATATATATATATATATATAT	<10>,<25>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:6:111,111,111,11,11,0	.	1/1:0,14,0:15:255,45,0,255,45,255
+chr21	23477802	chr21:23477802:M	TGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<10.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,2,33:35:255,255,255,103,65,0	1/2:0,8,12:20:255,182,158,142,0,86	2/2:0,0,24:24:255,255,255,71,71,0
+chr21	23486142	chr21:23486142:M	CAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAAAAAACCAAAACA	<9.4>	.	.	Motif=CAAAA	GT:AD:DP:PL	0/1:6,10:21:113,0,39	0/0:18,0:24:0,51,255	1/1:0,22:25:255,63,0
+chr21	23490881	chr21:23490881:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:5:106,29,20,52,0,38	1/2:0,1,4:5:81,55,52,17,0,2	1/1:0,2,0:5:80,12,0,62,12,56
+chr21	23493519	chr21:23493519:M	TTGTCTTGTCTTG	<1.6>	.	.	Motif=TTGTC	GT:AD:DP:PL	0/1:11,25:36:255,0,202	0/0:25,0:25:0,75,255	1/1:0,47:47:255,141,0
+chr21	23501439	chr21:23501439:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:26:124,0,177	0/0:24,2:27:0,34,255	1/1:0,24:26:255,73,0
+chr21	23501644	chr21:23501644:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,17:46:188,0,255	0/0:39,3:42:0,69,255	1/1:1,22:23:255,49,0
+chr21	23502144	chr21:23502144:M	TGTGTGGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGT	<27>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,11:25:151,0,111	0/0:16,0:20:0,53,255	0/1:7,6:19:75,0,90
+chr21	23509554	chr21:23509554:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<21>,<23>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,0,11,0:23:129,194,255,0,180,147,195,255,213,255	0/3:7,0,0,5:12:113,134,232,130,229,226,0,118,118,180	1/2:0,17,10,0:27:255,171,211,255,0,255,255,255,255,255
+chr21	23512654	chr21:23512654:M	ATATATATATATATATATATATATATATATATTATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,6:7:82,17,0	.	1/1:0,1:1:14,3,0
+chr21	23521581	chr21:23521581:M	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT	<12.7>,<15.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:12,5,0:17:98,0,255,135,224,255	0/2:1,0,3:4:42,53,107,0,18,6	0/1:9,6,0:16:134,0,219,165,167,255
+chr21	23536884	chr21:23536884:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:17:0,29,240	0/0:16,1:20:0,38,255	0/1:13,15:28:177,0,143
+chr21	23538512	chr21:23538512:M	AAATAAATAAAATAAATAAAT	<5.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:1,37:39:255,78,0	1/1:1,30:34:228,59,0	0/1:20,13:34:24,0,87
+chr21	23548261	chr21:23548261:M	AGAAAAAGAAAAAAAAAAAGA	<3.7>	.	.	Motif=AGAAAA	GT:AD:DP:PL	0/0:26,2:29:0,41,255	0/1:18,13:31:197,0,255	0/0:28,0:29:0,85,255
+chr21	23559406	chr21:23559406:M	AAACAAACAAACAAACAAACAAACAAACAAAAAAC	<7.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:15,10:25:120,0,217	1/1:0,28:28:255,82,0	0/0:17,0:17:0,50,255
+chr21	23559955	chr21:23559955:M	TTTTTATTTGTTTTTTTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,21:40:255,255,255,255,0,255	2/2:0,0,34:39:255,255,255,114,102,0	1/1:2,35,0:39:255,78,0,255,111,255
+chr21	23560837	chr21:23560837:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	1/1:0,3:5:130,15,0	1/1:0,0:1:12,3,0
+chr21	23561169	chr21:23561169:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28,0:29:255,67,0,255,84,255	1/1:0,26,0:26:255,76,0,255,78,255	1/2:2,14,15:31:255,238,255,221,0,255
+chr21	23565159	chr21:23565159:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:147,0,166	1/1:0,34:39:255,113,0	0/0:32,6:38:0,4,255
+chr21	23565494	chr21:23565494:M	TGTGTGTGTGTGTGTATGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,10:20:187,0,105	0/0:6,0:6:0,18,128	0/1:9,2:11:10,0,160
+chr21	23565524	chr21:23565524:M	TATATATATATATATATATATATATATATATATATATAT	<13.5>,<17.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,5,3:11:255,86,114,190,0,169	0/0:0,0,0:2:0,3,12,3,12,12	0/1:2,1,0:5:32,0,85,21,22,48
+chr21	23574675	chr21:23574675:M	TATCTATCTATCTATATCTATCTATCTATCTATCTATCTATCTATC	<12.5>,<16.5>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,8:20:255,214,178,228,0,255	0/1:10,7,0:17:77,0,132,126,180,255	0/2:9,0,8:17:188,215,255,0,167,218
+chr21	23580505	chr21:23580505:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:19:191,0,17	0/0:18,2:21:0,28,255	1/1:3,18:22:255,12,0
+chr21	23584980	chr21:23584980:M	AAAAAAAAAAAAAAGAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,5:21:29,0,222	0/1:3,9:12:120,0,16	0/1:8,8:16:95,0,95
+chr21	23595926	chr21:23595926:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,19:36:244,0,197	0/0:32,3:37:0,55,255	0/1:16,16:35:204,0,195
+chr21	23601984	chr21:23601984:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:17,3,0	0/0:8,0:9:0,26,148	0/1:2,5:7:64,0,13
+chr21	23603142	chr21:23603142:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,6:21:41,0,199	0/0:39,0:39:0,114,255	0/1:20,10:30:80,0,253
+chr21	23605499	chr21:23605499:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,23:49:255,0,255	0/0:44,0:45:0,135,255	0/1:18,16:37:255,0,255
+chr21	23610549	chr21:23610549:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<31>,<32>	.	.	Motif=T	GT:AD:DP:PL	0/2:2,3,5:13:140,28,32,0,4,20	1/2:0,5,4:13:188,48,30,34,0,17	0/2:1,0,0:8:18,14,26,0,17,17
+chr21	23611502	chr21:23611502:M	AATAATAATAATAATAATAA	<10.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:15,9:24:169,0,255	0/0:30,0:30:0,90,255	0/1:18,12:32:229,0,255
+chr21	23611935	chr21:23611935:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:50,9,0	0/1:1,1:2:10,0,10	0/0:0,0:1:0,0,0
+chr21	23619726	chr21:23619726:M	TTTATTTTATTTTATTTTATTTTATTTTTTTTTTTT	<6>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,15:18:255,53,0	0/1:4,6:11:136,0,84	0/1:5,8:16:195,0,99
+chr21	23624737	chr21:23624737:M	ATATATATATATATACACATATATATGGAGTATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,2:27:2,0,255	0/1:7,4:12:99,0,154	0/1:19,6:29:128,0,255
+chr21	23627991	chr21:23627991:M	TATATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,27:30:255,81,0	0/1:26,21:50:255,0,255	0/1:28,14:45:193,0,255
+chr21	23630930	chr21:23630930:M	TTGTTGTTGTTTTGTT	<4.7>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,23:28:255,66,0	0/1:21,18:39:106,0,140	0/1:16,11:30:70,0,108
+chr21	23634472	chr21:23634472:M	TTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,56,0	0/1:8,10:20:232,0,158	0/1:5,16:23:255,0,87
+chr21	23643392	chr21:23643392:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,42:45:255,95,0	0/1:23,23:48:255,0,255	0/1:16,23:40:255,0,186
+chr21	23651450	chr21:23651450:M	AAAAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,5:11:232,85,103,159,0,145	0/2:5,0,4:9:40,66,233,0,83,57	0/1:5,10,0:17:255,0,99,255,76,255
+chr21	23653615	chr21:23653615:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,8:17:219,135,192,109,0,151	0/1:7,8,0:18:116,0,70,159,102,255	0/2:14,1,6:21:46,87,255,0,192,199
+chr21	23653646	chr21:23653646:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,16,8:26:255,199,164,255,0,255	0/2:12,0,9:26:212,255,255,0,255,255	0/1:9,11,0:24:255,0,186,255,230,255
+chr21	23653673	chr21:23653673:M	TATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:16,13:32:230,0,255	1/1:1,22:28:255,50,0	0/1:16,9:29:144,0,255
+chr21	23655832	chr21:23655832:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,5:6:154,18,0	1/1:0,3:4:86,10,0
+chr21	23662030	chr21:23662030:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,29:46:255,0,164	0/0:43,2:47:0,102,255	0/1:21,22:44:255,0,253
+chr21	23671631	chr21:23671631:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:6:109,12,0	1/1:0,0:1:3,1,0	1/1:0,1:3:60,9,0
+chr21	23673860	chr21:23673860:M	TTTGTTTGTTTG	<3.2>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:13,13:29:49,0,63	0/1:20,19:44:68,0,102	0/0:23,0:25:0,61,222
+chr21	23675047	chr21:23675047:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:101,12,0	0/0:1,0:1:0,3,29	1/1:0,3:4:88,10,0
+chr21	23675412	chr21:23675412:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,26:54:255,0,255	0/0:50,0:51:0,150,255	0/1:23,22:45:255,0,255
+chr21	23676233	chr21:23676233:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,11:34:106,0,255	0/0:37,1:38:0,94,255	0/1:22,21:43:255,0,255
+chr21	23676759	chr21:23676759:M	AAACAAAAACAAAA	<2.5>	.	.	Motif=AAACAA	GT:AD:DP:PL	1/1:0,41:41:255,113,0	1/1:0,45:45:255,124,0	1/1:0,43:43:255,119,0
+chr21	23685841	chr21:23685841:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,18,16:34:255,255,255,255,255,204,255,255,0,243	1/2:0,31,14,0:45:255,250,118,255,0,255,255,212,255,255	3/3:0,0,0,35:35:255,255,255,255,255,255,103,105,103,0
+chr21	23689272	chr21:23689272:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:20,19:39:218,0,235	1/1:0,20:20:255,59,0
+chr21	23692049	chr21:23692049:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAA	<58>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0:11:0,32,194	0/1:3,1:4:5,0,39	0/1:1,3:4:40,0,6
+chr21	23693801	chr21:23693801:M	TTTTTTTCTTTTTTTCTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:39:0,117,255	0/1:17,16:33:255,0,255	0/0:38,0:38:0,114,255
+chr21	23697927	chr21:23697927:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:23:6,0,247	0/1:6,5:12:51,0,76	0/0:30,0:31:0,91,255
+chr21	23706889	chr21:23706889:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,27:30:255,33,0	1/1:1,32:33:255,79,0	1/1:0,38:39:255,114,0
+chr21	23722243	chr21:23722243:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:167,18,0	0/0:0,0:1:0,3,10	1/1:0,6:7:174,21,0
+chr21	23723516	chr21:23723516:M	TTTCTTTATTTCTTTTCTTTTCCTTTTTTTTTTTTCTTTCT	<10>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,21:22:255,64,0	1/1:0,24:26:255,73,0	1/1:0,22:24:255,69,0
+chr21	23729960	chr21:23729960:M	TTTTATTTTTTTATTTTTTATTTTTTATTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:14:111,0,73	0/0:16,2:18:0,17,250	1/1:0,24:25:255,64,0
+chr21	23730910	chr21:23730910:M	TTTATTTATTTATTTATTTATT	<6.5>,<7.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:9,21,0:30:255,0,87,255,173,255	0/0:33,0,0:33:0,97,255,99,255,255	1/2:0,18,25:43:255,255,255,255,0,215
+chr21	23741349	chr21:23741349:M	TTTTGTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,66,0	1/1:0,15:15:255,45,0	1/1:0,28:29:255,87,0
+chr21	23748118	chr21:23748118:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:18:255,50,0	1/1:0,17:21:255,54,0	1/1:0,23:25:255,69,0
+chr21	23754218	chr21:23754218:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,54:54:255,160,0	1/1:1,52:53:255,138,0	1/1:0,51:51:255,150,0
+chr21	23756750	chr21:23756750:M	CCCTCCCCCTCCCCC	<2.7>	.	.	Motif=CCCTCC	GT:AD:DP:PL	0/1:1,3:4:42,0,6	0/0:2,0:2:0,6,36	1/1:0,1:1:18,3,0
+chr21	23758057	chr21:23758057:M	AAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:112,12,0	1/1:0,7:8:200,23,0	.
+chr21	23758226	chr21:23758226:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:211,24,0	1/1:0,8:10:251,29,0	1/1:0,10:14:255,40,0
+chr21	23767163	chr21:23767163:M	ACACACACACACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,28:29:255,84,0	1/1:0,26:28:255,83,0
+chr21	23767798	chr21:23767798:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:8:171,23,0	1/1:0,12:15:255,44,0	1/1:0,13:16:255,45,0
+chr21	23769267	chr21:23769267:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:19:255,55,0	1/1:2,14:17:214,15,0	1/1:1,7:9:114,8,0
+chr21	23772296	chr21:23772296:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,34:36:255,69,0	1/1:0,26:27:255,70,0	1/1:0,28:29:255,85,0
+chr21	23776244	chr21:23776244:M	TTTTTTTTGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>,<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15,0:17:255,50,0,255,48,255	1/2:0,10,15:27:255,255,255,255,0,229	1/1:0,11,0:15:255,44,0,255,36,255
+chr21	23777141	chr21:23777141:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,45:49:255,106,0	0/1:21,23:46:255,0,244	1/1:1,34:36:255,87,0
+chr21	23779387	chr21:23779387:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26,1:28:255,64,0,255,64,255	1/1:0,23,0:23:255,67,0,255,67,255	1/2:0,13,8:22:255,134,82,188,0,173
+chr21	23782961	chr21:23782961:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:155,18,0	0/1:5,1:12:16,0,161	0/1:1,1:3:21,0,32
+chr21	23783661	chr21:23783661:M	ATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:3,42:45:255,76,0	0/1:23,11:34:98,0,255	1/1:1,39:40:255,99,0
+chr21	23796742	chr21:23796742:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>,<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:1,9,5:15:255,64,63,153,0,131	2/2:0,0,12:12:219,219,219,35,35,0	1/2:0,9,6:15:255,96,69,168,0,126
+chr21	23797911	chr21:23797911:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,32,0:32:255,96,0,255,96,255	1/2:0,10,5:15:255,90,105,255,0,251	1/1:0,18,0:18:255,54,0,255,54,255
+chr21	23797971	chr21:23797971:M	TTTTCTTTTTTTTCCTTTTTTCCTTTTTTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:87,15,0	0/1:4,3:7:30,0,46	1/1:1,8:9:120,9,0
+chr21	23798157	chr21:23798157:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:12:37,0,110	0/1:5,5:10:57,0,57	0/1:7,5:13:59,0,86
+chr21	23803677	chr21:23803677:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:92,17,0	1/1:0,3:4:39,2,0	0/1:2,3:5:35,0,18
+chr21	23803686	chr21:23803686:M	AAAGAAAGAAAGAAAGAAAAGAAA	<6.2>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,17:21:53,18,0	1/1:0,16:17:58,23,0	1/1:0,10:15:30,10,0
+chr21	23803777	chr21:23803777:M	TATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:3,25:30:255,40,0	0/1:4,8:12:83,0,24	1/1:0,15:16:224,43,0
+chr21	23805623	chr21:23805623:M	TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:2,36:38:255,75,0	0/1:18,10:29:92,0,241	1/1:2,29:32:255,55,0
+chr21	23806439	chr21:23806439:M	GAGAGAAAGAAAGAGAGAGAGGGAGAGAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,33:33:255,99,0	0/1:13,11:24:255,0,255	1/1:0,17:17:255,51,0
+chr21	23806476	chr21:23806476:M	GAAAGAAAGAAAGAAAAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<15>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,6:8:228,24,0	.	1/1:0,0:2:26,6,0
+chr21	23806571	chr21:23806571:M	AAGGAAGGAAGGAAGGAAGGAAGAAAACGAAGGAAGGAGGGAGGGAGAGAGGGAGGAAAAAAGAAAAAAGGAAGGAAGGAAGGAAAAGAAAGAAGGAAGG	<9>	.	.	Motif=AAGG	GT:AD:DP:PL	1/1:0,3:6:137,18,0	1/1:0,3:4:90,11,0	1/1:0,2:4:91,12,0
+chr21	23810815	chr21:23810815:M	AAAAAAAAAAAGAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:28:255,83,0	0/1:30,16:46:152,0,255	1/1:1,35:37:255,90,0
+chr21	23811329	chr21:23811329:M	GTGTTTGTGTGTGTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,20:25:255,74,0	0/1:30,16:55:255,0,255	1/1:0,34:40:255,117,0
+chr21	23814189	chr21:23814189:M	AAAAAACAAAAACAAAAACAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:37:255,88,0	0/1:24,7:33:6,0,228	1/1:0,32:36:255,90,0
+chr21	23814756	chr21:23814756:M	TATATATATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7,0:7:113,20,0,113,20,113	0/1:6,3,0:10:18,0,77,39,103,196	1/2:0,4,8:12:255,128,93,53,0,29
+chr21	23818534	chr21:23818534:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,1:17:0,32,255	0/0:18,0:18:0,53,255	0/1:12,5:17:38,0,161
+chr21	23818713	chr21:23818713:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:5:47,0,3	0/0:4,0:4:0,12,65	0/0:4,0:6:0,14,77
+chr21	23822338	chr21:23822338:M	AAAAAAAAACAAAAAACAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:32,0:32:0,94,255	0/1:13,12:25:150,0,168
+chr21	23823025	chr21:23823025:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,17:31:232,0,175	0/0:37,0:38:0,111,255	1/1:0,31:32:255,94,0
+chr21	23824022	chr21:23824022:M	TTTTATTTTCTTTTTCTTTTTTCTTTTTTCTTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:18:255,54,0	0/1:16,6:27:124,0,255	1/1:0,23:25:255,74,0
+chr21	23827547	chr21:23827547:M	TATGTGTGTATGTTTGTGTGTCTGTGTGTGTGTATGTAT	<10.2>	.	.	Motif=TATG	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:3,8:11:124,0,26	1/1:0,18:18:255,53,0
+chr21	23827583	chr21:23827583:M	TATATATATATATATATATAATATTTATAT	<18>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,20:23:255,47,0	0/1:5,3:9:50,0,112	1/1:0,14:15:255,34,0
+chr21	23830140	chr21:23830140:M	TTATTTATTTATTTATTTATTTA	<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,33:34:255,101,0	0/1:14,4:19:49,0,255	1/1:0,25:27:255,78,0
+chr21	23832333	chr21:23832333:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,36:42:255,83,0	0/1:17,20:39:255,0,183	1/1:0,28:30:255,85,0
+chr21	23836148	chr21:23836148:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,57,0	0/1:8,11:22:243,0,163	1/1:0,21:26:255,71,0
+chr21	23837002	chr21:23837002:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:49,0,48	0/0:14,1:18:0,31,236	0/0:11,0:11:0,32,192
+chr21	23837167	chr21:23837167:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:144,11,0	0/1:10,9:20:106,0,114	1/1:2,12:15:186,8,0
+chr21	23839400	chr21:23839400:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:17:198,4,0	0/1:15,7:23:63,0,192	1/1:1,22:23:255,50,0
+chr21	23846125	chr21:23846125:M	TGTTTTGTTTTTTTTGTTTT	<4.2>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:15,11:26:180,0,255	0/1:18,13:31:211,0,255	0/1:13,14:28:245,0,226
+chr21	23853857	chr21:23853857:M	AGAGAGAGAGAAAATGAGAGAGGGAGAGAGAGAGAGAGAGAGGAGAGAAGAGA	<25.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,20:22:255,64,0	0/1:13,15:28:187,0,151	1/1:0,14:14:255,41,0
+chr21	23858405	chr21:23858405:M	AAAAGAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:16:255,47,0	0/1:1,4:6:54,0,11	1/1:0,10:10:184,29,0
+chr21	23858427	chr21:23858427:M	ACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6:6:176,18,0	0/0:0,0:2:0,5,27	1/1:0,3:4:108,12,0
+chr21	23858457	chr21:23858457:M	ATATATATATATATATATATATATATATATATATATATATATATATATA	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,12:14:255,42,0	1/1:0,2:4:54,6,0	1/1:0,4:5:120,14,0
+chr21	23859435	chr21:23859435:M	ATTATAATTATATAAAATTATATATTTATAATTATA	<2>	.	.	Motif=ATTATA	GT:AD:DP:PL	0/1:4,3:7:83,0,85	0/0:0,0:1:0,0,0	.
+chr21	23860662	chr21:23860662:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,28,0:29:255,84,0,255,86,255	1/2:0,17,12:29:255,207,255,255,0,255	1/1:0,21,0:22:255,65,0,255,66,255
+chr21	23864699	chr21:23864699:M	ACACACACACACACACACACACACACACACACACACACACACAC	<20>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,14:24:151,181,255,0,156,88	0/1:10,11,2:25:231,0,214,139,133,235	0/2:5,1,10:17:119,112,241,0,71,41
+chr21	23865257	chr21:23865257:M	TATATATATATATATATA	<6>,<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:19,13,3:35:255,0,255,255,216,255	1/2:4,13,18:37:255,186,255,255,0,236	0/0:30,0,3:33:0,98,255,53,255,255
+chr21	23874464	chr21:23874464:M	AAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:10:66,0,114	1/1:0,4:6:128,15,0	0/0:11,0:11:0,33,255
+chr21	23891093	chr21:23891093:M	ATATATAAATATATATATATATATATATATATATATATATATATATATATATATATATAT	<16>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,18:22:255,57,0	1/1:0,7:8:209,24,0	.
+chr21	23892751	chr21:23892751:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>,<17>,<18>	.	.	Motif=ATT	GT:AD:DP:PL	1/2:0,6,9,0:15:255,169,233,165,0,140,255,169,167,255	1/1:0,7,0,0:7:210,21,0,213,21,218,213,21,218,218	2/3:0,0,7,3:10:191,212,255,55,56,26,109,129,0,100
+chr21	23896888	chr21:23896888:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTATCTATTTAACTATCTATCTA	<17.5>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:2,5:7:75,0,18	1/1:0,10:10:180,29,0	0/0:14,0:14:0,41,255
+chr21	23903804	chr21:23903804:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2,0:5:18,0,35,33,49,125	0/1:4,3,0:7:27,0,43,47,63,171	0/2:8,0,3:12:50,68,174,0,119,185
+chr21	23904757	chr21:23904757:M	TTTTTATTTTTATTTTTATTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:17:83,0,128	1/1:0,18:19:255,55,0	0/0:23,0:23:0,68,255
+chr21	23906360	chr21:23906360:M	TTATTTTATTTTATTTTATTTTATT	<6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:23,8:31:63,0,255	1/1:0,24:24:255,71,0	0/0:27,0:27:0,80,255
+chr21	23914137	chr21:23914137:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:8,0,25	.	1/1:0,4:4:67,12,0
+chr21	23919663	chr21:23919663:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:2,33:36:255,71,0	1/1:1,42:43:255,109,0
+chr21	23922844	chr21:23922844:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:27:255,58,0	1/1:2,27:31:255,53,0	1/1:0,32:34:255,99,0
+chr21	23924291	chr21:23924291:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:17,15:32:195,0,235	1/1:0,32:32:255,94,0	0/0:37,0:37:0,109,255
+chr21	23927858	chr21:23927858:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,93	1/1:0,6:6:106,18,0	0/1:9,2:11:4,0,130
+chr21	23948909	chr21:23948909:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:70,12,0	0/1:1,4:5:52,0,2	1/1:0,3:4:40,0,0
+chr21	23966637	chr21:23966637:M	CCCCCCCCCCCC	<13>	.	.	Motif=C	GT:AD:DP:PL	0/1:6,5:12:54,0,81	0/0:7,0:7:0,20,118	0/1:5,5:10:58,0,58
+chr21	23985888	chr21:23985888:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/0:27,2:30:0,51,255	0/1:14,13:32:150,0,186
+chr21	24006315	chr21:24006315:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,16,1,5:22:255,98,100,255,71,255,255,0,255,255	1/3:0,12,0,5:17:255,84,102,255,84,255,255,0,255,255	2/3:0,0,11,6:19:255,255,255,89,105,50,210,211,0,161
+chr21	24014707	chr21:24014707:M	TTGTTGTTGGGTTGTTGTTGTTGTTGTTTTGT	<9.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:12,20:32:255,0,123	0/1:20,23:43:255,0,249
+chr21	24018554	chr21:24018554:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:18,13:34:131,0,244	0/1:23,14:38:144,0,255
+chr21	24018856	chr21:24018856:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:26:0,77,255	0/1:16,8:26:153,0,255	0/1:15,10:28:199,0,255
+chr21	24034195	chr21:24034195:M	AACAACAACAA	<2.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:52,0:55:0,107,255	0/1:28,17:46:195,0,255	0/1:22,20:43:255,0,255
+chr21	24034667	chr21:24034667:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,81,255	0/1:28,26:54:255,0,255	0/1:13,30:43:255,0,116
+chr21	24034856	chr21:24034856:M	AATAAATAAATAAATAAATAA	<4.2>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/1:18,20:38:252,0,215	0/1:20,23:43:255,0,250
+chr21	24036151	chr21:24036151:M	AGACAAAGACAAAGA	<1.5>	.	.	Motif=AGACAA	GT:AD:DP:PL	0/0:32,0:35:0,81,255	0/1:19,17:38:205,0,242	0/1:17,18:37:248,0,206
+chr21	24042337	chr21:24042337:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,10:14:249,151,139,71,0,31	0/2:2,1,6:10:86,69,124,0,24,15	0/2:10,3,5:18:68,22,255,0,123,126
+chr21	24043471	chr21:24043471:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:14,14:31:172,0,162	0/1:14,19:35:255,0,149
+chr21	24045498	chr21:24045498:M	AAAAAAAAAAAAAAAAAA	<15>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19,0:21:255,62,0,255,62,255	0/1:5,10,0:19:251,0,123,255,109,255	1/2:0,11,6:19:255,103,122,255,0,255
+chr21	24047697	chr21:24047697:M	AAGAAAAAAAAAAAAAAGAAAAAGAAAAGAAA	<6.6>	.	.	Motif=AAGAA	GT:AD:DP:PL	0/1:6,10:17:161,0,82	0/0:8,1:10:0,8,153	0/1:11,6:18:73,0,184
+chr21	24049400	chr21:24049400:M	TATTTATTTATTTATTTATTTATTTA	<7.5>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:25,9:34:73,0,255	0/0:38,0:38:0,112,255	0/1:11,12:23:157,0,139
+chr21	24051269	chr21:24051269:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,13:25:164,0,146	1/1:2,18:23:255,29,0	0/1:15,10:26:103,0,201
+chr21	24051901	chr21:24051901:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,15:21:209,0,11	1/1:0,23:24:255,70,0	0/1:2,12:17:160,0,19
+chr21	24055340	chr21:24055340:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:25:111,0,194	1/1:2,27:31:255,53,0	0/0:24,0:27:0,78,255
+chr21	24055350	chr21:24055350:M	AACAACAACAAAAACAAACAAC	<5.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:4,1:5:8,0,88	0/1:28,2:37:27,0,255	1/1:1,12:14:255,16,0
+chr21	24061789	chr21:24061789:M	TTTTTCTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,20:38:255,0,225	1/1:2,28:34:255,63,0	0/1:19,17:36:203,0,241
+chr21	24076811	chr21:24076811:M	AGAGAGAGAGAGAGAGGAAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:11,16:29:255,0,211	0/0:22,0:23:0,69,255	0/1:18,11:31:217,0,255
+chr21	24081073	chr21:24081073:M	ATAACATAACA	<1.2>	.	.	Motif=ATAAC	GT:AD:DP:PL	0/1:17,24:41:255,0,211	0/0:22,0:22:0,65,255	0/1:24,29:53:255,0,255
+chr21	24093400	chr21:24093400:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21,1:41:255,0,240,255,255,255	0/0:38,0,0:40:0,117,255,120,255,255	0/2:19,6,11:38:224,105,255,0,255,255
+chr21	24096907	chr21:24096907:M	TCTCTCTCTCTCTCTCTCTCTCTCTC	<18>,<20>,<21>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,6,0:10:211,204,198,21,21,0,141,139,21,122	1/2:0,11,12,2:27:255,255,255,255,0,250,255,172,255,255	3/3:0,0,1,8:11:255,255,255,147,147,121,27,27,9,0
+chr21	24109572	chr21:24109572:M	TTTTTTTTTTTTTTTTT	<14>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,12,2,13:28:255,240,255,255,203,255,255,0,195,255	3/3:1,0,1,20:22:255,255,255,255,255,255,47,63,47,0	1/2:0,16,19,0:36:255,255,234,255,0,192,255,255,255,255
+chr21	24113576	chr21:24113576:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGA	<23>	.	.	Motif=AG	GT:AD:DP:PL	0/0:8,0:11:0,24,143	0/1:9,3:12:16,0,118	0/1:8,2:14:14,0,108
+chr21	24119044	chr21:24119044:M	TGTGTGTGTGTCTGTGTGTGTGTGTGTCTGTGTGTGCGTGCCTCTGTGTGTGTGTGTGTGTGTGT	<31.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:9,1:10:0,11,150	0/0:9,0:9:0,26,159	0/1:6,6:13:81,0,71
+chr21	24122103	chr21:24122103:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,11:31:121,0,242	0/0:34,4:41:0,49,255	0/1:18,18:41:232,0,224
+chr21	24126833	chr21:24126833:M	AAAAAAAAAAAAAAAGAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:23:255,0,178	0/0:26,1:30:0,56,255	0/1:10,10:20:205,0,210
+chr21	24129417	chr21:24129417:M	ACACACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,9:20:187,0,230	0/0:17,0:20:0,59,255	0/1:10,14:26:255,0,201
+chr21	24142240	chr21:24142240:M	AAAAAAAAAAAAACAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,26:30:255,37,0	1/1:1,27:29:255,68,0	1/1:0,33:36:255,101,0
+chr21	24157799	chr21:24157799:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:31,1:32:0,76,255	0/1:17,17:35:191,0,180	0/0:40,0:41:0,120,255
+chr21	24173632	chr21:24173632:M	AGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGACAGATAGATAGATAGGTATAGATAGAT	<11.2>,<18.5>,<19.5>,<20.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/2:0,5,5,0,4:14:204,93,126,83,0,103,140,28,82,126,149,26,30,96,130	1/4:0,1,0,0,5:6:79,66,130,92,119,137,79,66,92,79,26,0,27,26,12	1/3:0,2,2,4,0:10:187,120,119,100,27,83,74,0,46,56,147,74,89,73,133
+chr21	24175695	chr21:24175695:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,18:49:203,0,255	0/0:43,2:47:0,102,255	0/1:15,16:32:209,0,179
+chr21	24186995	chr21:24186995:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:14:0,23,212	0/1:8,9:19:105,0,89	0/0:18,2:22:0,9,255
+chr21	24203912	chr21:24203912:M	ACACACACACACACACACACACACACACA	<15.5>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:2,16,17:35:255,248,183,190,0,189	1/2:1,11,8:20:255,111,70,130,0,130	1/1:2,27,0:29:255,52,0,255,84,255
+chr21	24206789	chr21:24206789:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,0,3:8:207,78,61,136,50,114,128,0,84,119	1/2:0,5,6,1:13:255,105,72,83,0,56,213,66,74,202	3/3:0,0,0,4:5:135,132,129,92,92,80,15,15,14,0
+chr21	24210498	chr21:24210498:M	AAAACAAAACAAAACA	<4.4>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:22,18:40:255,0,255	0/1:22,22:44:255,0,255	0/0:53,0:53:0,159,255
+chr21	24214629	chr21:24214629:M	GAAAGAGATAAAGAGAAAGAAAGAGAAGGAGGGAGAGAGAAAGAGAAAG	<7.7>	.	.	Motif=GAAAGA	GT:AD:DP:PL	0/0:10,0:15:0,25,95	0/1:6,9:17:49,0,19	0/0:15,0:21:0,37,142
+chr21	24218390	chr21:24218390:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:7:32,0,50	1/1:0,3:3:50,9,0	0/1:2,2:5:29,0,20
+chr21	24222719	chr21:24222719:M	ACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,31:31:255,91,0	1/1:0,30:30:255,89,0
+chr21	24226730	chr21:24226730:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,0:52:0,152,255	0/1:28,23:53:255,0,255	0/1:21,19:40:232,0,255
+chr21	24229201	chr21:24229201:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:251,0,196	0/1:24,11:37:105,0,255	0/0:43,1:44:0,112,255
+chr21	24230523	chr21:24230523:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,14:22:199,0,63	0/1:13,14:27:162,0,145	1/1:0,18:19:255,55,0
+chr21	24235523	chr21:24235523:M	TATATATATATATATACTATATATGTATATATATATAT	<21>,<24>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,17,11:30:255,255,255,255,0,255	0/1:5,5,0:11:109,0,125,131,144,255	0/2:12,0,2:17:55,87,255,0,255,255
+chr21	24237613	chr21:24237613:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9,2:17:209,0,126,130,77,194	0/2:8,1,6:15:70,71,255,0,121,96	0/1:4,5,0:10:126,0,84,96,70,142
+chr21	24246457	chr21:24246457:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,18:21:255,25,0	0/1:11,4:15:25,0,146	1/1:2,17:19:255,20,0
+chr21	24250212	chr21:24250212:M	TGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:4,0,6:10:141,102,190,0,102,82	0/1:2,9,0:11:230,0,25,146,50,170	0/2:7,1,9:20:213,138,255,0,174,152
+chr21	24253627	chr21:24253627:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,1:48:0,123,255	0/1:20,17:37:195,0,248	0/0:59,0:59:0,174,255
+chr21	24257979	chr21:24257979:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/2:2,11,11:24:255,167,255,167,0,253	1/2:1,15,23:41:255,255,255,249,0,255	1/2:0,19,17:37:255,255,255,255,0,255
+chr21	24267083	chr21:24267083:M	AAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,26:26:255,78,0	.
+chr21	24271463	chr21:24271463:M	AGATAAATAGGTAGATAGATGATTGATTGATTGATAGATGGATAGATAGATAGATGATAGACAGATGATAGA	<20>	.	.	Motif=AGAT	GT:AD:DP:PL	0/1:4,2:6:33,0,84	0/0:13,0:13:0,39,255	0/1:8,5:14:85,0,166
+chr21	24273612	chr21:24273612:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:14:233,41,0	0/1:7,3:11:28,0,84	1/1:0,15:17:255,49,0
+chr21	24274643	chr21:24274643:M	TTTTTTTTTTTCTCTTTTTTGTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,0:17:0,41,255	0/1:11,6:19:114,0,243	0/0:11,0:13:0,29,255
+chr21	24277609	chr21:24277609:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,11:35:100,0,255	0/1:15,19:36:242,0,152	0/1:13,14:29:172,0,154
+chr21	24280683	chr21:24280683:M	TATATATATATATATATATATATAT	<13.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,15,12:29:255,193,131,206,0,197	0/2:1,1,2:4:50,19,25,0,3,20	1/1:1,6,0:9:89,4,0,72,2,93
+chr21	24287743	chr21:24287743:M	ATAATAATAATAATAATAATAATAAT	<6.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:12,4:18:38,0,211	1/1:0,8:10:170,24,0	0/0:18,1:19:0,35,255
+chr21	24287767	chr21:24287767:M	ATCATCATCATCATCATCAT	<9.7>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,29:33:255,98,0	1/1:0,27:28:255,83,0	1/1:0,32:37:255,108,0
+chr21	24292912	chr21:24292912:M	TGTTTTTGTTTTTTTTTT	<3.2>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/0:16,0:16:0,48,255	0/1:18,17:35:250,0,255	0/0:13,0:13:0,39,255
+chr21	24295450	chr21:24295450:M	AAAAAAACAAAAACAAAAACAAAACAAAACAAAAAAAA	<39>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:12:0,28,171	0/1:16,6:24:43,0,213	0/0:14,0:16:0,34,236
+chr21	24296135	chr21:24296135:M	TTTTTTCTTTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,15:19:227,9,0	1/1:0,13:16:182,12,0	1/1:0,9:13:154,15,0
+chr21	24302678	chr21:24302678:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,26,0:28:255,77,0,255,79,255	1/2:4,8,8:21:173,80,185,90,0,198	1/2:2,13,11:26:255,166,254,202,0,255
+chr21	24307116	chr21:24307116:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19:34:255,0,164	0/1:30,25:56:255,0,255	0/1:25,14:40:140,0,255
+chr21	24307538	chr21:24307538:M	TTTTTCTTTTTTTTTTTTTTTTTTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,0:3:16,20,36,0,14,9	1/1:0,3,0:4:49,9,0,56,8,82	2/2:0,0,4:6:90,102,141,17,18,0
+chr21	24310402	chr21:24310402:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,20,13:34:255,225,255,255,0,255	1/2:0,29,9:38:255,157,151,255,0,255	1/2:0,22,15:37:255,255,255,255,0,255
+chr21	24314168	chr21:24314168:M	AAATAAATAAATAAATAAATAAATAAATAAATAAAT	<8>,<10>	.	.	Motif=AAAT	GT:AD:DP:PL	0/2:7,0,9:16:132,178,255,0,117,89	1/2:0,7,7:14:217,127,186,129,0,208	0/2:9,0,10:20:134,191,255,0,148,118
+chr21	24315345	chr21:24315345:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:132,15,0	1/1:0,3:4:98,12,0	0/1:1,5:10:166,0,2
+chr21	24316096	chr21:24316096:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8,0:11:243,8,0,249,27,255	1/2:0,1,3:9:96,51,84,51,0,50	0/1:0,0,0:3:3,0,16,10,19,29
+chr21	24320424	chr21:24320424:M	AATAAATAAATAAATAAA	<3.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:22,20:42:244,0,255	1/1:0,41:41:255,121,0
+chr21	24322175	chr21:24322175:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,0,14:34:168,255,255,0,255,255	1/2:0,25,21:46:255,255,255,255,0,255	0/2:21,1,24:46:255,255,255,0,255,255
+chr21	24325234	chr21:24325234:M	ATATATATATATATATATATATATATATATATAT	<20.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,3:5:66,0,18	0/0:1,0:2:0,6,51	0/0:0,0:1:0,2,5
+chr21	24327928	chr21:24327928:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,25:29:255,46,0	1/1:1,38:41:255,102,0	1/1:0,23:25:255,73,0
+chr21	24341060	chr21:24341060:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:30:255,83,0	1/1:0,44:48:255,135,0	1/1:0,28:32:255,89,0
+chr21	24342272	chr21:24342272:M	ATCTATCTATCTATCTATGTATCTATCTATCAACTGTCTATCATCTGTCTATTTATCATCTATCTATCT	<18.2>	.	.	Motif=ATCT	GT:AD:DP:PL	1/1:0,9:10:141,26,0	1/1:0,8:9:121,23,0	1/1:0,19:21:255,55,0
+chr21	24349210	chr21:24349210:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:52,0,80	0/1:2,8:10:104,0,4	0/1:3,3:8:29,0,47
+chr21	24350862	chr21:24350862:M	AAAGAAAGAAA	<1.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,59:59:255,174,0	1/1:0,49:49:255,145,0
+chr21	24357842	chr21:24357842:M	TATATATATATATATGTATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:26,20:46:250,0,255	1/1:0,36:36:255,106,0	0/0:47,2:49:0,107,255
+chr21	24361597	chr21:24361597:M	TTTTTGTTTGTTTTTTTTTTGTTGTTTTTTGTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:30,1:31:0,73,255	0/1:17,12:29:132,0,223
+chr21	24367103	chr21:24367103:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,5:5:131,15,0
+chr21	24373121	chr21:24373121:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:29:89,0,248	1/1:4,28:35:255,35,0	0/1:17,16:36:178,0,201
+chr21	24374789	chr21:24374789:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,100,0	1/1:2,44:47:255,103,0	1/1:2,49:51:255,114,0
+chr21	24379399	chr21:24379399:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:7:83,0,43	0/1:1,6:8:140,0,4	0/1:5,6:12:120,0,101
+chr21	24379660	chr21:24379660:M	TTATTATTATTATTATTATTATT	<8.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:17,21:38:255,0,216	1/1:0,21:21:255,62,0	0/1:12,19:31:255,0,134
+chr21	24382599	chr21:24382599:M	AAAAATAAAAAAAAAAAAAAA	<18>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,11,4,8:25:255,141,168,245,75,201,255,0,135,255	1/2:0,19,11,0:32:255,175,88,255,0,215,255,145,255,255	2/3:1,0,19,13:36:255,255,255,160,218,127,255,254,0,214
+chr21	24383530	chr21:24383530:M	ATATATATATATATATATATATA	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:13,0:19:0,42,255	1/1:0,0:2:0,0,0	0/1:10,6:16:118,0,229
+chr21	24383556	chr21:24383556:M	AGAGAGAGAGAGA	<8.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:17,0:17:0,51,255	.	0/1:12,4:16:50,0,255
+chr21	24383571	chr21:24383571:M	ATATATATATACAGATATATATATATATATATACAGATATATATATACAGATATATATATATATATATA	<35.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:4:47,11,0	.	0/1:3,1:4:1,0,24
+chr21	24387454	chr21:24387454:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,12,0,5:18:255,157,123,255,142,255,208,0,255,255	2/3:1,0,10,4:17:255,255,255,99,114,74,154,255,0,255	1/1:0,30,0,0:31:255,91,0,255,93,255,255,93,255,255
+chr21	24391572	chr21:24391572:M	ATATATATAGTTATTTATAACATATAATATATATTTATAATATATATTATAT	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,3:13:43,0,222	0/1:2,3:5:67,0,37	0/1:5,5:10:107,0,100
+chr21	24402019	chr21:24402019:M	AAAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,7:23:58,0,211	1/1:1,11:15:179,16,0	0/0:21,1:22:0,47,255
+chr21	24412839	chr21:24412839:M	ATATGTATATATATGTATATATATATATATATACATATATATAT	<24>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,10:16:255,0,124	0/1:0,0:1:0,0,0	0/0:8,0:10:0,24,232
+chr21	24434397	chr21:24434397:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,2:13:19,0,255	0/0:19,0:25:0,74,255	0/1:10,5:19:92,0,246
+chr21	24480365	chr21:24480365:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:23:0,48,255	0/0:34,3:40:0,64,255	0/1:13,13:27:155,0,167
+chr21	24483526	chr21:24483526:M	AAAATAAAATAAAATAAAATAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<13>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:8,10:18:142,0,103	0/1:1,1:2:12,0,12	1/1:0,5:7:115,20,0
+chr21	24492847	chr21:24492847:M	TCTCTCTCTCTCTCTCTCTCCCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:29,0:30:0,87,255	0/0:46,1:47:0,116,255	0/1:16,20:36:255,0,255
+chr21	24492880	chr21:24492880:M	TGTTTTTTTTGTTGTTTTGATTTGTTTTGTTTTGTTTT	<7.8>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:35,0:35:0,104,255	0/1:13,7:20:93,0,228
+chr21	24501023	chr21:24501023:M	ACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	<9.2>,<10.2>	.	.	Motif=ACAAA	GT:AD:DP:PL	0/2:8,0,11:19:255,211,255,0,153,179	0/1:10,12,0:23:152,0,127,185,189,255	2/2:0,0,20:20:255,255,255,60,59,0
+chr21	24505690	chr21:24505690:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:25:0,58,255	0/0:20,0:25:0,46,255	0/1:16,19:40:255,0,255
+chr21	24508486	chr21:24508486:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:25:0,70,255	0/0:32,0:36:0,101,255	0/1:16,7:27:54,0,227
+chr21	24518180	chr21:24518180:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:97,12,0	1/1:0,5:8:181,23,0	1/1:0,7:7:203,21,0
+chr21	24519399	chr21:24519399:M	TCTCTCTCTCCCTTTCTCTGTCTCTCTCTCTCTCTCTC	<18>,<20>	.	.	Motif=TC	GT:AD:DP:PL	0/2:17,0,12:30:70,141,255,0,161,138	0/2:16,1,8:25:30,86,255,0,144,140	1/2:0,8,21:29:255,255,255,93,0,100
+chr21	24519436	chr21:24519436:M	CACACACACACACACAAACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/1:22,24:47:255,0,255	0/1:18,14:33:255,0,255	1/1:0,31:34:255,101,0
+chr21	24521573	chr21:24521573:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAA	<33>,<35>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:12:88,100,201,0,120,165	0/2:12,1,7:23:144,159,255,0,197,255	1/2:1,11,2:15:198,41,22,171,0,255
+chr21	24526323	chr21:24526323:M	TTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,3:5:124,62,50,18,0,4	1/2:0,2,0:3:71,10,3,34,0,26	1/2:0,5,2:7:206,35,15,87,0,67
+chr21	24527024	chr21:24527024:M	TTTTCTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7,0:15:82,0,100,106,142,255	0/2:6,0,9:17:207,158,227,0,108,130	1/1:1,12,0:13:193,21,0,196,38,221
+chr21	24530150	chr21:24530150:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,14:23:186,0,96	0/1:16,8:28:68,0,225	0/0:34,0:38:0,110,255
+chr21	24533391	chr21:24533391:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,9:22:255,218,195,194,0,255	1/2:1,9,8:18:255,191,174,134,0,216	0/1:20,12,0:33:114,0,255,208,255,255
+chr21	24543216	chr21:24543216:M	TGTGTGTGTGTGTGTGTGTGTG	<12>,<16>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,15,17:34:255,255,255,255,0,255	1/2:0,14,10:26:255,255,239,245,0,255	0/1:24,12,0:37:112,0,255,219,255,255
+chr21	24545569	chr21:24545569:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,27,12:39:255,217,224,255,0,255	1/2:2,13,17:33:255,255,255,204,0,255	0/1:26,25,0:53:255,0,255,255,255,255
+chr21	24551703	chr21:24551703:M	TTTTCTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:13:0,30,171	1/1:0,6:11:127,24,0	0/1:9,3:13:14,0,130
+chr21	24563122	chr21:24563122:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:30:255,70,0	1/1:1,45:46:255,117,0	1/1:1,42:44:255,111,0
+chr21	24566744	chr21:24566744:M	TATATATATATATATATATATATATATA	<16>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:12:227,33,0	0/1:1,1:3:15,0,15	0/1:1,3:7:51,0,9
+chr21	24572962	chr21:24572962:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:40:218,0,255	0/1:24,16:42:159,0,255	0/0:41,0:44:0,128,255
+chr21	24580128	chr21:24580128:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:6:119,51,66,76,0,67	0/1:3,7,0:11:166,0,66,178,58,228	2/2:0,0,2:2:34,40,59,6,6,0
+chr21	24584325	chr21:24584325:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:17:7,0,179	0/1:4,7:13:91,0,40	0/0:22,0:24:0,69,255
+chr21	24586155	chr21:24586155:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTT	<29>,<30>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,7:15:255,134,94,106,0,83	2/2:0,0,6:8:199,143,125,24,23,0	1/2:1,4,4:9:145,53,45,42,0,55
+chr21	24586339	chr21:24586339:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,5:9:74,0,28	1/1:2,13:18:221,17,0	0/0:10,0:10:0,29,177
+chr21	24592409	chr21:24592409:M	TTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:5:72,9,0	1/1:0,3:4:104,12,0	.
+chr21	24593600	chr21:24593600:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,6:6:165,18,0	0/1:8,9:17:198,0,175
+chr21	24599889	chr21:24599889:M	TTTTATTTTTAT	<2.3>	.	.	Motif=TTTTAT	GT:AD:DP:PL	1/1:0,46:46:255,138,0	1/1:0,39:39:255,117,0	0/1:15,20:35:255,0,255
+chr21	24601238	chr21:24601238:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,1:16:0,29,249	0/0:19,1:23:0,49,255	0/1:14,9:25:97,0,174
+chr21	24616356	chr21:24616356:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0:30:255,90,0,255,90,255	1/1:0,47,0:49:255,147,0,255,147,255	1/2:0,26,13:39:255,255,255,255,0,255
+chr21	24617888	chr21:24617888:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,5:47:0,46,255	0/0:40,2:42:0,88,255	0/1:36,31:69:255,0,255
+chr21	24618983	chr21:24618983:M	TTTTTGTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:89,15,0	1/1:1,8:10:117,9,0	0/1:6,6:16:62,0,87
+chr21	24621663	chr21:24621663:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,22:27:255,24,0	1/1:2,21:23:255,33,0	0/1:17,8:28:61,0,250
+chr21	24622313	chr21:24622313:M	AAAAAAAAAAAGAAAAAAAGAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:0,29:30:255,88,0	0/1:13,11:24:130,0,167
+chr21	24624600	chr21:24624600:M	AACAAACAAACAAACAAACAAACAAACAAA	<8.5>	.	.	Motif=AACA	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,30:30:255,88,0	0/1:14,13:27:169,0,184
+chr21	24627642	chr21:24627642:M	ATAAATACATAAGTAAATAAATAA	<6.2>	.	.	Motif=ATAA	GT:AD:DP:PL	1/1:6,26:32:227,18,0	1/1:5,24:30:210,17,0	0/1:26,13:39:42,0,191
+chr21	24627670	chr21:24627670:M	GTGTGTGTGTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,34:34:255,102,0	0/1:21,23:45:255,0,255
+chr21	24630988	chr21:24630988:M	TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,38:39:255,114,0	0/1:11,21:32:255,0,110
+chr21	24633370	chr21:24633370:M	TGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,9:21:255,104,47,109,0,82	1/2:1,7,5:13:143,45,22,51,0,55	0/2:11,1,3:15:25,22,107,0,113,201
+chr21	24634911	chr21:24634911:M	TAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	<10.2>,<11.2>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/2:4,0,5:10:69,69,165,0,62,50	0/2:3,0,3:7:37,33,104,0,41,36	1/2:0,7,4:11:243,63,42,129,0,99
+chr21	24636570	chr21:24636570:M	TATATATATATATATATATATATATAT	<7.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,23:24:255,255,255,72,72,0	2/2:0,0,4:4:116,116,116,12,12,0	1/2:0,8,5:15:255,133,116,200,0,188
+chr21	24636638	chr21:24636638:M	TATATATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,34:35:255,98,0	1/1:0,12:13:169,36,0	0/1:17,8:28:67,0,146
+chr21	24636656	chr21:24636656:M	TTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,5,27:34:255,255,249,99,11,0	2/2:0,0,9:11:255,119,87,31,8,0	1/1:0,20,4:30:255,86,0,255,33,255
+chr21	24641986	chr21:24641986:M	TTTGTTTCTGTTTTTGTTTTTTTTTT	<4.5>	.	.	Motif=TTTGTT	GT:AD:DP:PL	0/0:35,2:38:0,76,255	0/1:7,13:21:171,0,60	0/0:22,0:22:0,64,255
+chr21	24644109	chr21:24644109:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,3:4:39,0,5	1/1:0,1:2:28,6,0
+chr21	24645907	chr21:24645907:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:17:255,51,0	1/1:0,11:15:255,36,0	1/1:1,15:17:255,21,0
+chr21	24656275	chr21:24656275:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:15:202,7,0	0/1:2,7:13:124,0,15	1/1:2,11:14:174,5,0
+chr21	24660566	chr21:24660566:M	TTAATTAAATTAATTGATTAATTA	<5>	.	.	Motif=TTAA	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,37:38:255,112,0	1/1:0,37:37:255,109,0
+chr21	24663567	chr21:24663567:M	TTTTCTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:12:255,35,0	1/1:0,9:12:255,31,0	1/1:0,3:3:89,9,0
+chr21	24667453	chr21:24667453:M	ATATATATATATATATAAAATATATATAT	<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,23:23:255,69,0	1/1:0,8:8:210,24,0	1/1:0,17:17:255,51,0
+chr21	24667499	chr21:24667499:M	ATATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,14:14:255,42,0	1/1:0,19:21:255,60,0
+chr21	24669541	chr21:24669541:M	CTCTCTCTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:1,40:41:255,103,0	1/1:0,34:36:255,105,0
+chr21	24680590	chr21:24680590:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:32:255,56,0	1/1:1,43:45:255,114,0	1/1:0,34:34:255,100,0
+chr21	24681669	chr21:24681669:M	CACACACACACAC	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,41:42:255,105,0	1/1:1,29:30:255,70,0	1/1:0,29:29:255,86,0
+chr21	24682960	chr21:24682960:M	ACACACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39:41:255,122,0	1/1:0,36:36:255,108,0	1/1:0,48:48:255,144,0
+chr21	24686391	chr21:24686391:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:47:255,138,0	1/1:2,52:56:255,128,0	1/1:0,42:43:255,126,0
+chr21	24688236	chr21:24688236:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,44:47:255,101,0	0/1:20,21:42:255,0,231	0/1:15,28:44:255,0,145
+chr21	24690435	chr21:24690435:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAA	<39>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4,0:5:52,0,2,55,16,79	0/1:4,6,0:11:64,0,43,78,72,182	0/2:2,1,3:6:63,34,50,0,18,39
+chr21	24696204	chr21:24696204:M	TGTGTGTATGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,18:30:255,0,138	0/0:20,0:22:0,62,255	1/1:0,19:23:255,68,0
+chr21	24696241	chr21:24696241:M	ACACACACACACACACACATACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,10:24:175,0,250	0/0:22,0:22:0,66,255	1/1:0,17:17:255,51,0
+chr21	24698516	chr21:24698516:M	AAAAAAATAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,255	0/0:43,0:43:0,129,255	1/1:0,52:55:255,164,0
+chr21	24701845	chr21:24701845:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,1:36:0,88,255	0/1:14,21:36:255,0,143	0/0:46,1:47:0,120,255
+chr21	24715815	chr21:24715815:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:12:119,0,45	0/0:0,0:1:0,3,19	1/1:0,6:10:206,23,0
+chr21	24715854	chr21:24715854:M	AGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,9:28:139,0,255	0/0:26,0:26:0,78,255	1/1:0,15:17:255,37,0
+chr21	24718412	chr21:24718412:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,11:27:180,0,255	0/1:16,16:36:255,0,255	1/1:2,26:34:255,37,0
+chr21	24727598	chr21:24727598:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,22:42:255,0,244	0/0:30,0:32:0,93,255	0/1:23,19:44:212,0,255
+chr21	24729171	chr21:24729171:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0,0:37:0,109,255,111,255,255	0/2:16,2,18:38:255,255,255,0,255,255	0/1:26,24,1:51:255,0,255,255,255,255
+chr21	24736981	chr21:24736981:M	GTGGGGTGGGG	<2.4>	.	.	Motif=GTGGG	GT:AD:DP:PL	0/1:3,14:17:255,0,18	0/0:16,0:16:0,48,255	0/1:11,15:26:255,0,174
+chr21	24738324	chr21:24738324:M	AAAAAAAAATAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,14:37:150,0,255	0/1:14,12:26:133,0,168	1/1:0,21:22:255,64,0
+chr21	24741148	chr21:24741148:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>,<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,10,5,0,0:28:255,0,255,63,237,255,255,162,221,255,255,255,255,255,255	0/4:11,0,0,1,5:18:83,130,255,130,255,255,57,195,192,143,0,253,229,120,208	2/3:4,9,12,20,1:46:255,241,255,207,255,255,255,37,0,255,255,255,255,255,255
+chr21	24741192	chr21:24741192:M	ATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:20,23:46:255,0,255	0/0:24,0:24:0,72,255	0/1:27,24:52:255,0,255
+chr21	24741202	chr21:24741202:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/1:10,12:22:249,0,177	0/1:31,21:52:255,0,255
+chr21	24748702	chr21:24748702:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,7:23:124,0,255	0/0:28,0:29:0,87,255	0/1:20,15:38:255,0,255
+chr21	24765824	chr21:24765824:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,13:28:255,243,168,219,0,178	0/1:14,12,0:28:129,0,185,177,255,255	0/2:13,0,8:21:165,141,255,0,230,255
+chr21	24767358	chr21:24767358:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:251,0,255	0/1:17,22:39:255,0,255	0/0:32,0:33:0,99,255
+chr21	24767403	chr21:24767403:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:197,15,0	0/1:0,1:2:39,0,7	1/1:0,1:1:32,3,0
+chr21	24774242	chr21:24774242:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,22:50:255,0,255	0/0:43,0:46:0,134,255	0/1:20,27:50:255,0,223
+chr21	24781970	chr21:24781970:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:31:96,0,180	0/1:15,14:31:135,0,128	0/0:30,1:32:0,75,255
+chr21	24784350	chr21:24784350:M	ATATATATATATATATATAT	<9>,<11>	.	.	Motif=AT	GT:AD:DP:PL	1/2:2,14,16:34:255,255,255,245,0,255	0/1:16,17,0:36:218,0,187,255,242,255	0/2:16,0,14:31:181,255,255,0,251,207
+chr21	24791984	chr21:24791984:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTG	<22.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,5,0:13:52,0,100,76,134,255	0/1:13,9,0:22:90,0,159,129,220,255	0/2:14,2,11:29:240,161,255,0,230,255
+chr21	24797961	chr21:24797961:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:14:73,0,162	0/1:11,8:24:161,0,255	0/0:24,0:24:0,72,255
+chr21	24799402	chr21:24799402:M	AAAAAAAAAAAAAAAAAAA	<17>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18,0:22:255,62,0,255,65,255	1/2:0,4,6:11:187,107,157,99,0,82	1/2:2,24,8:39:255,106,166,255,0,255
+chr21	24802225	chr21:24802225:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGT	<16>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,29:29:255,87,0	0/1:14,16:30:255,0,255	0/1:20,17:41:255,0,255
+chr21	24806111	chr21:24806111:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:0,33:33:255,97,0	0/0:19,0:20:0,59,255
+chr21	24807935	chr21:24807935:M	ATATTATATATATATATATGTAAATATATATATA	<18>,<19>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,12,18:31:255,255,253,175,0,147	0/2:6,1,7:14:159,108,177,0,90,132	0/1:10,13,0:23:174,0,118,204,183,255
+chr21	24811882	chr21:24811882:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:22:94,0,146	0/1:12,10:24:104,0,147	0/0:20,0:20:0,59,255
+chr21	24828390	chr21:24828390:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,8:20:168,0,224	0/1:7,6:15:136,0,153	1/1:1,15:22:255,21,0
+chr21	24832630	chr21:24832630:M	ACACACACACACACACAC	<10>	.	.	Motif=AC	GT:AD:DP:PL	0/1:27,18:46:202,0,255	0/0:42,0:44:0,129,255	0/1:29,22:52:255,0,255
+chr21	24835684	chr21:24835684:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,9:28:187,0,255	0/0:20,0:27:0,63,255	0/1:17,8:28:146,0,255
+chr21	24836423	chr21:24836423:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,29:47:255,0,202	0/1:14,14:29:165,0,174	0/1:13,24:37:255,0,131
+chr21	24838266	chr21:24838266:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,22:24:255,255,255,65,58,0	1/2:0,12,12:27:255,211,255,255,0,255	0/2:11,0,10:26:134,201,255,0,210,142
+chr21	24841845	chr21:24841845:M	TTTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:29:0,82,255	0/1:24,9:33:59,0,255	0/0:29,0:29:0,85,255
+chr21	24847015	chr21:24847015:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:30:211,0,155	0/1:24,17:43:186,0,255	1/1:0,27:29:255,85,0
+chr21	24855453	chr21:24855453:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2:39:0,78,255	0/1:20,14:36:145,0,255	0/1:11,21:32:255,0,106
+chr21	24859691	chr21:24859691:M	ATATATATATATATATATA	<7.5>,<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:19,17,1:37:255,0,255,255,255,255	0/2:9,0,19:28:255,255,255,0,159,79	1/2:0,18,19:37:255,255,247,255,0,228
+chr21	24870562	chr21:24870562:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,14:34:155,0,255	0/1:12,13:28:144,0,156	1/1:1,28:35:255,80,0
+chr21	24878687	chr21:24878687:M	TTTGTTTTGTTTGTGGTGTTTTTCTTTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	<10>	.	.	Motif=TTTGT	GT:AD:DP:PL	1/1:0,2:3:61,9,0	1/1:0,6:8:169,24,0	1/1:0,3:3:68,9,0
+chr21	24879776	chr21:24879776:M	TATTTTTTTATGTGTATTTATTTATATTTATTT	<7>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:18,8:26:125,0,255	0/0:8,0:8:0,24,214	0/1:10,9:19:173,0,210
+chr21	24879820	chr21:24879820:M	TATATATATTTTTATATATGTTTATATATATTTTATATATTTATATATACGTATATATATATACGTATATATATATATATATATATACACATATATATA	<27.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,1:1:23,3,0	.	1/1:0,3:3:69,9,0
+chr21	24889901	chr21:24889901:M	ATATATATATATATGTGTGTGTATATATATATATATATAT	<18>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,14:29:255,0,255	0/1:5,13:18:255,0,80	1/1:0,34:34:255,102,0
+chr21	24899193	chr21:24899193:M	GAGAGAGAGAGAGAGAGAGAGACGGAAAGAGAGAGAGAGAGACAGACAGAGAGACAGACAGACAGAGAGACAGACAGAGAGA	<5.5>	.	.	Motif=GAGA	GT:AD:DP:PL	0/1:2,4:10:92,0,38	0/1:3,1:9:15,0,71	0/0:4,0:11:0,15,122
+chr21	24905907	chr21:24905907:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3,2:12:20,0,114,18,71,144	0/2:6,1,2:11:17,19,116,0,62,85	2/2:1,0,6:7:89,108,173,3,18,0
+chr21	24917569	chr21:24917569:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:30:0,69,255	0/1:18,17:35:204,0,221	0/1:25,25:50:255,0,255
+chr21	24922191	chr21:24922191:M	ATATATATGGTATATATCATATATATAT	<15>	.	.	Motif=AT	GT:AD:DP:PL	0/1:14,3:17:8,0,220	0/0:15,0:15:0,44,255	0/1:17,6:23:45,0,251
+chr21	24922373	chr21:24922373:M	TTTTTTTTCTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,2,10:24:255,255,255,0,159,255	0/1:5,7,0:14:82,0,59,119,94,255	1/2:0,11,2:17:250,94,73,183,0,255
+chr21	24928678	chr21:24928678:M	TTTTTTTTATTTTTTTTATTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:0,28:28:255,82,0	1/1:1,33:34:255,82,0
+chr21	24934629	chr21:24934629:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:30:119,0,235	1/1:1,17:21:255,34,0	0/1:10,14:24:175,0,105
+chr21	24937333	chr21:24937333:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:36,0,19	1/1:1,7:8:97,7,0	1/1:0,5:5:83,15,0
+chr21	24940527	chr21:24940527:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:2:52,6,0	.	1/1:0,3:3:91,9,0
+chr21	24941147	chr21:24941147:M	TAAAAATAAAAA	<2.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/1:21,30:52:255,0,158	0/1:29,17:47:122,0,255	0/0:41,0:42:0,112,255
+chr21	24943428	chr21:24943428:M	TTTTTTTTTTTTCTTTTTTTTTTTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3,0:6:47,0,18,61,30,114	0/2:2,0,3:5:36,50,106,0,28,19	1/2:0,6,3:10:139,61,68,103,0,144
+chr21	24946296	chr21:24946296:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:79,14,0	0/1:1,3:5:51,0,2	1/1:0,3:3:51,9,0
+chr21	24952227	chr21:24952227:M	TTCTTGTTCTTGTTTTGTT	<3.7>	.	.	Motif=TTCTTG	GT:AD:DP:PL	0/1:22,16:38:255,0,255	0/0:44,0:45:0,133,255	0/1:27,14:41:253,0,255
+chr21	24955214	chr21:24955214:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,10:18:132,0,61	0/1:10,4:16:23,0,134	0/1:6,12:19:154,0,50
+chr21	24957091	chr21:24957091:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,17:22:255,50,0	1/1:0,4:6:82,14,0	1/1:0,6:7:108,18,0
+chr21	24958748	chr21:24958748:M	AAAAAAGAAAAAAAAAAAAAAAAACAAAGAAAAGAAAA	<37>,<39>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,8:15:165,122,189,64,0,90	2/2:1,0,9:13:166,195,255,21,35,0	1/2:0,4,5:10:136,83,111,76,0,97
+chr21	24969519	chr21:24969519:M	ACACACACGCAGACACACACACACACATCTAAACACACACACACACACAC	<26>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,9:18:117,0,116	1/1:0,24:24:255,71,0	0/1:11,10:22:119,0,146
+chr21	24974689	chr21:24974689:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,5:28:9,0,255	1/1:0,16:17:255,49,0	0/1:11,6:19:68,0,135
+chr21	24981549	chr21:24981549:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,10:27:255,162,106,201,0,194	1/2:0,18,8:27:255,141,66,248,0,221	1/2:2,13,18:35:255,255,211,142,0,149
+chr21	24987372	chr21:24987372:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:27:238,0,255	0/0:19,0:23:0,62,255	0/1:11,5:19:87,0,251
+chr21	24990644	chr21:24990644:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:20:255,40,0	0/1:18,10:30:97,0,221	0/1:11,14:30:185,0,119
+chr21	24991240	chr21:24991240:M	AAAAAAAAAAAACGAAAAAAGAAAAGAGAAAGAAAAAAAAAGAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:136,0,154	1/1:0,28:29:255,85,0	0/0:16,1:17:0,32,255
+chr21	24997456	chr21:24997456:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,20:24:255,54,0	1/1:0,8:10:91,15,0	1/1:0,21:26:255,59,0
+chr21	25004368	chr21:25004368:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/1:13,18:31:245,0,151	1/1:0,24:24:255,70,0	0/0:30,0:30:0,88,255
+chr21	25010479	chr21:25010479:M	ACACACACACATACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:37,0:38:0,111,255	0/1:20,18:40:255,0,255	0/0:51,0:51:0,153,255
+chr21	25010667	chr21:25010667:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,5:46:0,43,255	0/0:32,2:36:0,67,255	0/1:25,21:49:255,0,255
+chr21	25018811	chr21:25018811:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,50:52:255,134,0	1/1:4,58:63:255,114,0	0/1:20,20:41:244,0,254
+chr21	25021697	chr21:25021697:M	GTTTGTTTGTTTGTTTGTTT	<6>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:33,0:33:0,97,255	0/1:24,24:48:255,0,255
+chr21	25022199	chr21:25022199:M	GGGGGGGGGGGGG	<10>,<12>	.	.	Motif=G	GT:AD:DP:PL	2/2:0,0,3:5:75,67,89,14,9,0	2/2:0,0,3:5:76,65,87,14,9,0	1/2:0,4,4:9:179,72,92,109,0,93
+chr21	25023583	chr21:25023583:M	ATTTATTTATTTATT	<4.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:47,0:47:0,139,255	0/0:53,0:53:0,156,255	0/1:23,23:46:255,0,255
+chr21	25027856	chr21:25027856:M	ACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:18,20:38:247,0,206	0/0:57,0:57:0,168,255
+chr21	25029138	chr21:25029138:M	TATATATATATATATATATATATATATATATATATATAT	<15.5>,<16.5>,<20.5>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,14,4:18:255,255,255,66,110,69,255,231,0,255	2/2:0,0,1,0:1:31,19,16,3,3,0,31,19,3,31	1/3:0,6,0,3:9:207,49,64,146,82,163,167,0,97,158
+chr21	25030087	chr21:25030087:M	TTCCTTCCTTCCTTCTTTCCTTTCTTCCTTCCTCCCTCCCTCCCTCCTTCTTCCTTCCTTCCTTGCTTCCTTCCTTTTTTCCTTCCTTC	<2.8>,<18.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:2,3,6:12:169,103,145,22,0,51	0/2:2,1,2:7:77,59,106,0,26,38	0/2:3,1,5:11:141,126,199,0,51,54
+chr21	25040379	chr21:25040379:M	AAAAAAAAAATAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/0:43,0:44:0,129,255	0/1:16,20:36:255,0,190
+chr21	25040543	chr21:25040543:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,23,0:28:255,0,8,255,89,255	1/1:2,25,0:27:255,45,0,255,79,255	1/2:0,20,10:30:255,174,89,255,0,255
+chr21	25052192	chr21:25052192:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:22,0,16	0/1:1,4:5:50,0,2	0/1:3,4:10:50,0,35
+chr21	25061130	chr21:25061130:M	TTATTTTTTATTTATTTATTTATTTATTTATTTATTTATTT	<13.2>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,8:8:223,24,0	1/1:0,2:2:56,6,0	0/1:9,6:15:122,0,205
+chr21	25061461	chr21:25061461:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,22:25:255,38,0	1/1:0,20:24:255,68,0	0/1:8,16:25:212,0,64
+chr21	25063956	chr21:25063956:M	CACACACACACACACACACACACACACACACACACA	<15>,<16>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,19,23:42:255,255,255,255,0,225	1/1:0,26,1:29:255,86,0,255,67,255	0/2:6,0,21:28:255,255,255,0,148,92
+chr21	25070637	chr21:25070637:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,24:27:255,43,0	1/1:2,21:26:255,38,0	0/1:14,15:30:186,0,159
+chr21	25096779	chr21:25096779:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,13:23:182,0,74	0/1:3,6:12:90,0,18	0/1:4,12:19:172,0,25
+chr21	25096945	chr21:25096945:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:31:0,69,255	0/1:15,11:27:110,0,189	0/0:30,1:31:0,74,255
+chr21	25102864	chr21:25102864:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:29:255,84,0	1/1:0,29:31:255,87,0	0/1:21,22:43:255,0,255
+chr21	25130137	chr21:25130137:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,31:33:255,61,0	1/1:1,31:34:255,82,0	0/1:15,20:36:253,0,171
+chr21	25138954	chr21:25138954:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,12:18:173,0,17	1/1:1,10:11:147,16,0	0/0:9,0:10:0,29,164
+chr21	25144016	chr21:25144016:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:13:94,0,42	0/1:1,4:5:53,0,2	0/0:7,0:7:0,21,121
+chr21	25145300	chr21:25145300:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:21:131,0,255	1/1:0,8:11:231,21,0	0/0:24,0:26:0,78,255
+chr21	25152194	chr21:25152194:M	TATATAAATATATATAAATTATATATAAATTTATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,4:30:34,0,255	0/1:4,3:7:68,0,83	0/1:17,5:26:85,0,255
+chr21	25158458	chr21:25158458:M	GAAGGAAGGAAGG	<2.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:11,15:26:220,0,136	0/0:22,0:22:0,65,255	0/1:18,17:35:222,0,236
+chr21	25162327	chr21:25162327:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,44:44:255,129,0	0/1:24,25:49:255,0,255
+chr21	25170469	chr21:25170469:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,9:19:104,0,122	0/1:10,6:17:60,0,120	0/0:18,1:22:0,46,255
+chr21	25174547	chr21:25174547:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,4:10:99,41,59,26,0,24	1/2:1,8,3:14:255,26,22,137,0,118	2/2:0,0,4:6:67,68,69,10,12,0
+chr21	25179952	chr21:25179952:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,19:38:243,0,233	1/1:0,40:41:255,120,0	0/0:41,3:45:0,77,255
+chr21	25180903	chr21:25180903:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,23:49:255,0,255	1/1:4,44:51:255,78,0	0/0:49,2:52:0,116,255
+chr21	25181034	chr21:25181034:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,19:48:222,0,255	0/0:43,2:45:0,96,255	0/1:30,23:54:255,0,255
+chr21	25181846	chr21:25181846:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<7.5>,<8>,<12.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/2:0,11,8,0:19:255,220,185,255,0,255,255,220,255,255	2/2:0,0,18,0:18:255,255,255,54,54,0,255,255,54,255	1/3:0,12,0,4:16:255,75,77,255,113,255,255,0,255,255
+chr21	25183010	chr21:25183010:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>,<21>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,15,11,0:29:255,255,255,255,0,255,255,255,255,255	2/3:0,0,10,7:18:255,255,255,191,191,153,255,255,0,241	0/1:20,14,0,0:36:255,0,255,255,255,255,255,255,255,255
+chr21	25186124	chr21:25186124:M	AAAAAAAAGAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/0:42,0:43:0,124,255	0/1:21,27:48:255,0,248
+chr21	25186446	chr21:25186446:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:117,0,63	0/0:9,0:11:0,32,174	0/1:3,4:9:54,0,37
+chr21	25187519	chr21:25187519:M	TGTTTTTTTTTTTGTTTGTTT	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:53,0:55:0,157,255	0/0:31,0:31:0,93,255	0/1:22,15:37:225,0,255
+chr21	25190702	chr21:25190702:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:91,12,0	1/1:0,0:1:14,3,0	0/1:6,4:10:79,0,140
+chr21	25194404	chr21:25194404:M	ACACATACAGACACACACACACACACACACACACACACACACA	<17.5>,<25.5>,<27.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,16,0,5:21:255,133,85,255,131,255,255,0,255,255	2/3:0,0,12,12:26:255,255,255,255,255,255,255,255,0,255	0/1:11,17,0,0:29:255,0,255,255,255,255,255,255,255,255
+chr21	25195902	chr21:25195902:M	TTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTT	<33>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,7,6:15:209,69,63,69,0,101	0/1:8,6,0:15:57,0,103,84,143,255	0/2:5,1,4:11:81,53,119,0,77,120
+chr21	25196771	chr21:25196771:M	TATATATATAGGATATATATA	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,20:34:255,0,151	1/1:0,15:16:255,46,0	0/0:52,0:52:0,154,255
+chr21	25198324	chr21:25198324:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,22:40:255,0,220	1/1:1,27:29:255,67,0	0/0:32,0:32:0,94,255
+chr21	25203356	chr21:25203356:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,22:27:255,24,0	1/1:4,20:25:255,4,0	0/1:10,7:17:76,0,129
+chr21	25210329	chr21:25210329:M	TTTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTT	<33>,<35>,<36>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,4,9,0:23:56,65,232,0,42,104,95,182,162,255	0/3:11,0,1,6:19:96,141,255,62,173,152,0,139,125,216	1/2:1,10,15,0:28:234,177,255,113,0,174,255,192,240,255
+chr21	25214217	chr21:25214217:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:25,0,8	1/1:0,7:8:113,20,0	0/1:6,5:12:59,0,65
+chr21	25223513	chr21:25223513:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,1:4:6,15,94,0,52,40	2/2:0,0,8:10:137,113,108,25,4,0	1/2:2,3,3:9:83,9,56,17,0,28
+chr21	25228145	chr21:25228145:M	ATATATATATATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,5:21:160,0,86	1/1:0,3:5:104,12,0	0/0:5,0:8:0,23,183
+chr21	25228176	chr21:25228176:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:8,2,5:17:106,34,191,0,169,202	1/2:0,1,1:2:43,12,6,11,0,6	0/1:2,7,0:9:125,0,16,77,38,104
+chr21	25232074	chr21:25232074:M	AAAAAAGAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,126,0	1/1:0,37:37:255,111,0	1/1:0,48:50:255,144,0
+chr21	25237376	chr21:25237376:M	AATAGTAATAGT	<2.7>	.	.	Motif=AATAGT	GT:AD:DP:PL	0/1:10,18:28:255,0,195	1/1:0,34:34:255,102,0	0/0:32,0:32:0,96,255
+chr21	25242694	chr21:25242694:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:0,33:35:255,102,0	0/1:21,6:30:41,0,255
+chr21	25244413	chr21:25244413:M	GTGTGTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,38:38:255,112,0	0/1:18,24:43:255,0,212
+chr21	25247870	chr21:25247870:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,1,13:30:148,215,255,0,224,211	0/0:24,2,1:27:0,45,255,61,255,255	1/2:0,13,8:22:255,148,187,226,0,255
+chr21	25259483	chr21:25259483:M	ATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATAGATAATAGATAGATA	<17.2>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:6,2:9:20,0,86	1/1:1,14:15:230,27,0	0/1:5,10:15:139,0,47
+chr21	25259585	chr21:25259585:M	ATGATGATGATGATGATGATGA	<6.3>	.	.	Motif=ATG	GT:AD:DP:PL	1/1:0,47:47:255,139,0	1/1:0,41:41:255,121,0	1/1:0,42:42:255,124,0
+chr21	25266888	chr21:25266888:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:20:255,41,0	1/1:3,17:21:242,11,0	1/1:0,19:20:255,58,0
+chr21	25269904	chr21:25269904:M	AAAAAGAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:27:55,0,255	0/1:8,7:18:77,0,104	0/1:4,11:19:150,0,37
+chr21	25280880	chr21:25280880:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGT	<17>,<19>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,18,17:37:255,255,255,255,0,255	1/2:0,24,5:30:255,88,57,255,0,255	0/2:12,0,16:28:203,255,255,0,212,132
+chr21	25303267	chr21:25303267:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,5:7:71,0,16	1/1:1,11:14:193,23,0	0/1:15,5:21:28,0,223
+chr21	25309386	chr21:25309386:M	ACAACAACAACAACAACAA	<7.7>	.	.	Motif=ACA	GT:AD:DP:PL	1/1:0,54:54:255,162,0	1/1:0,31:31:255,93,0	0/1:29,20:49:255,0,255
+chr21	25310083	chr21:25310083:M	ATATATATATATGTGTGTATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,5:5:61,14,0	1/1:0,2:2:24,5,0	1/1:0,6:6:73,17,0
+chr21	25317688	chr21:25317688:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,54:54:255,159,0	0/1:26,20:47:232,0,255
+chr21	25318545	chr21:25318545:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,58:58:255,174,0	1/1:0,47:48:255,144,0	0/1:22,27:51:255,0,255
+chr21	25328125	chr21:25328125:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:16:93,0,93	0/1:6,8:15:99,0,57	0/0:19,0:22:0,53,255
+chr21	25328639	chr21:25328639:M	ATATTAATATTAATTTATGTTAATTATTAATAT	<3>	.	.	Motif=ATATTA	GT:AD:DP:PL	0/1:30,12:42:192,0,255	0/1:30,6:38:52,0,255	0/1:41,7:49:43,0,255
+chr21	25330156	chr21:25330156:M	ATTATTATCATTATTATTAATTATTAT	<8>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,25:25:255,74,0	0/1:23,25:48:255,0,255
+chr21	25330181	chr21:25330181:M	ATGATAATGATA	<1.5>	.	.	Motif=ATGATA	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,38:38:255,114,0	0/1:30,30:60:255,0,255
+chr21	25332291	chr21:25332291:M	ATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:2,16,13:33:255,255,255,255,0,255	1/2:0,9,2:11:183,50,24,157,0,236	0/2:12,0,3:15:43,78,255,0,215,255
+chr21	25349188	chr21:25349188:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,2,0:22:4,0,255,61,255,255	0/1:3,5,0:10:100,0,76,115,64,181	0/2:16,0,8:28:123,195,255,0,255,230
+chr21	25351944	chr21:25351944:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,20:46:233,0,255	0/1:21,20:43:225,0,242	0/0:43,3:46:0,82,255
+chr21	25352085	chr21:25352085:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,23:39:255,0,172	0/1:19,18:39:210,0,229	0/0:38,0:39:0,112,255
+chr21	25368279	chr21:25368279:M	AAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:6:118,51,35,44,0,35	2/2:0,1,5:7:147,93,76,18,4,0	0/2:10,2,2:15:26,12,142,0,139,240
+chr21	25399853	chr21:25399853:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:13:83,0,67	0/1:9,3:14:10,0,129	0/1:4,6:11:79,0,37
+chr21	25420159	chr21:25420159:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,111,0	1/1:0,31:35:255,99,0	1/1:0,33:37:255,102,0
+chr21	25427328	chr21:25427328:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/1:28,17:45:172,0,255	0/0:55,2:57:0,131,255
+chr21	25431540	chr21:25431540:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,22:50:255,0,255	0/1:25,19:46:222,0,255	0/0:37,1:39:0,96,255
+chr21	25439922	chr21:25439922:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:33:161,0,244	0/1:18,13:33:150,0,218	0/0:37,1:41:0,101,255
+chr21	25449117	chr21:25449117:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,7:23:255,89,70,238,0,196	1/2:2,11,3:17:255,10,25,161,0,151	1/1:0,27,1:30:255,86,0,255,70,255
+chr21	25452012	chr21:25452012:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,21,7:31:255,124,129,255,0,255	1/2:0,11,12:23:255,203,255,255,0,255	2/2:1,0,29:31:255,255,255,73,92,0
+chr21	25453066	chr21:25453066:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,4:5:55,58,83,0,17,3	2/2:0,0,3:3:50,50,50,9,9,0	1/2:2,3,4:9:93,23,63,17,0,25
+chr21	25477440	chr21:25477440:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:161,0,179	0/0:37,1:39:0,97,255	0/1:16,20:37:255,0,180
+chr21	25496834	chr21:25496834:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,19:21:255,25,0	0/1:16,15:33:165,0,195	1/1:1,17:19:255,38,0
+chr21	25510247	chr21:25510247:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:19:199,0,9	0/1:5,3:9:24,0,69	1/1:2,8:14:131,2,0
+chr21	25511959	chr21:25511959:M	ATATATATATATATATATATA	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:22,2:26:0,36,255	0/0:12,0:13:0,38,250	0/1:12,7:19:85,0,185
+chr21	25514771	chr21:25514771:M	ATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGA	<11.2>,<13.2>	.	.	Motif=ATGG	GT:AD:DP:PL	1/2:1,11,9:21:255,152,202,190,0,255	1/1:0,33,0:33:255,97,0,255,99,255	2/2:0,0,22:22:255,255,255,65,66,0
+chr21	25524688	chr21:25524688:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,49:51:255,131,0	0/1:8,13:23:183,0,74	1/1:1,27:31:255,72,0
+chr21	25534823	chr21:25534823:M	ACACACACACACACACACACACACACACACACACA	<9.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,7:22:137,184,255,0,255,255	1/2:0,15,8:30:255,194,137,255,0,255	0/0:18,0,0:30:0,85,255,17,255,255
+chr21	25535422	chr21:25535422:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:26:0,41,255	0/1:11,5:20:36,0,137	0/0:25,3:28:0,31,255
+chr21	25540122	chr21:25540122:M	AATAATAATAATAATAATAA	<5.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:40,0:42:0,102,255	0/1:16,13:30:160,0,203	0/0:45,1:48:0,101,255
+chr21	25547348	chr21:25547348:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<24>,<27>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11,0:14:208,40,0,240,41,255	0/2:2,1,4:12:109,84,109,0,7,64	1/1:2,9,0:13:132,6,0,164,38,255
+chr21	25552832	chr21:25552832:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/0:33,4:38:0,41,255	0/1:17,15:35:189,0,214
+chr21	25559376	chr21:25559376:M	TTTTTTTTTTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:12:0,33,255	0/1:4,3:7:59,0,86	0/0:5,0:6:0,17,141
+chr21	25562048	chr21:25562048:M	GGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/1:7,3:12:19,0,92	0/0:20,0:21:0,58,255
+chr21	25566946	chr21:25566946:M	TCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:16,25:42:255,0,165	0/0:34,0:34:0,100,255
+chr21	25572109	chr21:25572109:M	ATATATATATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:14,2:19:0,17,57	0/1:6,8:17:7,0,15	0/0:19,0:20:0,35,95
+chr21	25572130	chr21:25572130:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12,0:29:255,0,235,139,255,255	1/2:0,4,5:13:255,73,37,76,0,47	0/0:21,0,0:24:0,50,255,66,255,255
+chr21	25573530	chr21:25573530:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	0/1:22,21:45:254,0,255	1/1:0,34:34:255,100,0
+chr21	25575777	chr21:25575777:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,67,0	0/1:11,13:25:164,0,118	1/1:1,32:35:255,82,0
+chr21	25576486	chr21:25576486:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<11>,<12>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,14,0:27:255,233,153,214,0,135,255,233,214,255	1/3:0,15,0,22:39:255,255,255,255,255,255,255,0,237,255	2/2:0,0,38,0:38:255,255,255,114,111,0,255,255,114,255
+chr21	25577031	chr21:25577031:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,53:55:255,143,0	1/1:0,55:56:255,164,0	1/1:0,36:38:255,111,0
+chr21	25577094	chr21:25577094:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,52:56:255,127,0	1/1:0,35:35:255,103,0	1/1:1,36:38:255,87,0
+chr21	25581342	chr21:25581342:M	CTTTCTTTCTTTCTTT	<1.5>,<1.8>	.	.	Motif=CTTT	GT:AD:DP:PL	2/2:0,0,3:7:165,46,26,21,0,0	1/2:0,0,0:5:83,25,12,19,0,5	1/1:0,3,0:5:124,14,0,41,4,26
+chr21	25581355	chr21:25581355:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:50,9,0	1/1:0,2:3:45,9,0	0/1:1,1:3:21,0,8
+chr21	25581993	chr21:25581993:M	TATATATATATATCTTATATATATACACTATTATATATATA	<21>,<22>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,3,4:12:72,44,37,2,0,33	1/1:0,2,0:3:6,3,0,10,4,22	1/2:1,1,4:6:46,39,34,0,0,9
+chr21	25582033	chr21:25582033:M	ACACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:18,0:21:0,62,255	0/1:5,3:11:38,0,97	0/0:13,0:16:0,47,255
+chr21	25584863	chr21:25584863:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,10:20:125,0,125	0/1:9,18:31:249,0,73	0/0:23,3:30:0,18,255
+chr21	25588312	chr21:25588312:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,91,0	0/1:21,17:39:188,0,255	1/1:0,47:48:255,141,0
+chr21	25589422	chr21:25589422:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:23:255,63,0	1/1:0,37:40:255,111,0	1/1:0,32:35:255,96,0
+chr21	25591080	chr21:25591080:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:39:255,116,0	1/1:0,13:14:255,42,0	1/1:0,40:41:255,123,0
+chr21	25594250	chr21:25594250:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,4:12:222,52,31,108,0,78	0/2:0,0,1:4:4,13,47,0,30,24	1/1:0,9,0:10:255,30,0,177,29,152
+chr21	25596675	chr21:25596675:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,48:50:255,149,0	0/1:25,23:51:255,0,255	1/1:0,54:55:255,162,0
+chr21	25598857	chr21:25598857:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24,0:30:255,78,0,255,86,255	1/2:2,15,10:31:255,146,239,255,0,255	1/1:0,28,0:32:255,95,0,255,95,255
+chr21	25600396	chr21:25600396:M	AAAAAAAAAAAAAAAAAAAAAA	<23>,<26>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,1:4:56,55,54,9,9,0	1/1:0,4,0:4:66,12,0,78,12,118	2/2:0,0,5:5:141,141,141,15,15,0
+chr21	25600576	chr21:25600576:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:24:255,72,0	0/1:14,9:28:174,0,255	1/1:0,23:24:255,69,0
+chr21	25611041	chr21:25611041:M	AAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,91,255	0/1:21,15:38:161,0,255	0/0:30,1:33:0,78,255
+chr21	25612118	chr21:25612118:M	TATATATATATATACGTATATATATACGTATATATA	<12>,<19>	.	.	Motif=TA	GT:AD:DP:PL	0/2:12,0,8:20:97,155,255,0,231,175	0/1:10,20,1:31:255,0,227,255,162,255	2/2:0,0,16:21:255,255,255,47,48,0
+chr21	25613552	chr21:25613552:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,23,0:39:255,0,159,255,255,255	0/2:8,2,11:21:250,250,255,0,103,187	1/1:0,31,0:34:255,97,0,255,99,255
+chr21	25614426	chr21:25614426:M	AAAAAAAAAAAAAAAACAAAAACAAAAAACAAACAAACAAAAAAAAACAAAGAAAAAAAGAAAAAAGAAAAGAAAAAGAAAAAA	<78>,<79>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:57,41,36,6,6,0	1/1:0,6,0:6:178,18,0,119,18,103	2/2:0,0,4:5:126,90,78,14,14,0
+chr21	25615130	chr21:25615130:M	CTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16>,<17>,<23>	.	.	Motif=CT	GT:AD:DP:PL	1/2:0,13,10,0:24:255,190,118,255,0,190,255,190,255,255	2/3:0,1,17,15:33:255,255,255,255,255,255,255,255,0,255	1/1:0,24,0,0:27:255,80,0,255,78,255,255,80,255,255
+chr21	25625815	chr21:25625815:M	AATAATAATAATAAT	<4>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,3:3:58,9,0	.	.
+chr21	25631295	chr21:25631295:M	TCTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTT	<4.8>	.	.	Motif=TCTTTT	GT:AD:DP:PL	1/1:0,23:24:255,70,0	0/1:4,7:11:94,0,40	1/1:0,13:14:248,40,0
+chr21	25633261	chr21:25633261:M	AAAAAAAAAAGAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:36:0,69,255	0/1:24,20:44:222,0,255	0/0:37,0:37:0,109,255
+chr21	25633939	chr21:25633939:M	AAAAAAAAAAAAAAA	<17>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,1,4:5:133,133,132,69,69,56,18,18,0,3	1/1:1,10,1,0:15:255,8,0,242,10,255,255,29,255,255	2/3:0,0,7,4:11:255,255,255,69,69,37,120,119,0,88
+chr21	25640796	chr21:25640796:M	CTTTCTCTTTCTTCTTTCTTTCTCTCTCTCTTTCT	<6.5>	.	.	Motif=CTTTCT	GT:AD:DP:PL	1/1:0,12:19:165,34,0	0/0:11,0:17:0,31,152	1/1:0,21:25:255,59,0
+chr21	25641596	chr21:25641596:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	0/1:23,18:42:201,0,255	1/1:0,39:39:255,115,0
+chr21	25644867	chr21:25644867:M	TTTGTTTGTTTGTTTGTTTGTTTGTTT	<5.8>,<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,31,0:31:255,92,0,255,93,255	1/2:0,19,15:34:255,255,255,255,0,255	1/1:0,36,0:36:255,106,0,255,108,255
+chr21	25648444	chr21:25648444:M	GTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:10,13:26:255,0,212	0/0:30,0:32:0,95,255
+chr21	25651062	chr21:25651062:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,3,3:10:31,7,54,18,0,71	0/1:4,0,1:8:6,0,42,11,28,55	1/2:1,1,2:5:26,15,38,13,0,30
+chr21	25655915	chr21:25655915:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,1:49:0,126,255	0/1:27,21:50:225,0,255	0/0:36,3:40:0,62,255
+chr21	25659255	chr21:25659255:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,25:36:255,0,61	0/1:21,17:39:187,0,255	1/1:0,34:35:255,102,0
+chr21	25660760	chr21:25660760:M	ATATATATATATATATATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,5:11:75,0,93	.	0/1:5,3:12:29,0,141
+chr21	25669372	chr21:25669372:M	AAAAAAAAGAAAAAAAAGAAAAAAAGAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/1:7,16:23:255,0,125	0/0:31,0:31:0,93,255
+chr21	25680769	chr21:25680769:M	TGGATGGATGGATGGATGGATGGATGACGATCGATGGATGGATGGATGGATGG	<12.2>	.	.	Motif=TGGA	GT:AD:DP:PL	0/1:12,15:27:205,0,151	0/0:16,0:16:0,47,255	1/1:0,25:26:255,76,0
+chr21	25685525	chr21:25685525:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0,0:3:0,9,85,9,60,52	0/2:3,0,4:7:46,55,127,0,49,29	1/2:1,3,3:8:104,26,38,42,0,39
+chr21	25686445	chr21:25686445:M	TATGTGTATGTGT	<1.8>	.	.	Motif=TATGTG	GT:AD:DP:PL	0/1:23,27:50:255,0,255	0/0:39,0:39:0,117,255	1/1:0,53:53:255,159,0
+chr21	25688244	chr21:25688244:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<21>,<26>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,13,0:27:255,0,255,255,255,255	0/2:9,0,7:20:149,180,255,0,243,226	1/1:0,18,0:18:255,54,0,255,54,255
+chr21	25688291	chr21:25688291:M	CACACGCACGCACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,18:39:219,0,255	0/0:33,0:34:0,97,255	1/1:0,24:24:255,71,0
+chr21	25689013	chr21:25689013:M	TTTTTTGTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,20:35:255,0,146	0/0:48,0:49:0,143,255	1/1:0,45:46:255,135,0
+chr21	25692007	chr21:25692007:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,9:22:187,161,255,0,223,255	0/1:14,8,0:22:75,0,180,117,241,255	2/2:0,1,15:18:255,255,255,50,34,0
+chr21	25694836	chr21:25694836:M	AAAAAAAAAAAAAATAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,2:30:0,51,255	0/1:12,8:23:94,0,145	0/0:25,1:27:0,61,255
+chr21	25694969	chr21:25694969:M	TTTTTCTTTCTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,12:18:166,0,57	0/0:17,1:19:0,38,255	1/1:3,20:24:255,6,0
+chr21	25697008	chr21:25697008:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:11:0,32,198	0/1:7,2:10:5,0,100	0/1:9,3:12:17,0,123
+chr21	25697952	chr21:25697952:M	CTCTCTCTCTCGCTCTCTCTC	<9.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:33,1:35:0,82,255	0/0:33,0:33:0,90,255	0/1:13,16:31:108,0,76
+chr21	25700317	chr21:25700317:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,1:49:0,126,255	0/1:23,17:42:190,0,255	0/0:46,1:47:0,120,255
+chr21	25701925	chr21:25701925:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,3:40:0,63,255	0/1:17,24:42:255,0,180	0/0:37,2:40:0,82,255
+chr21	25703769	chr21:25703769:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:51:255,139,0	0/1:16,17:39:255,0,255	1/1:0,25:35:255,101,0
+chr21	25715986	chr21:25715986:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9,1:10:172,29,0,145,12,142	1/2:0,3,3:6:123,51,34,42,0,33	0/1:2,4,1:8:61,0,15,41,18,93
+chr21	25720457	chr21:25720457:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:15:234,26,0	1/1:1,10:12:143,7,0	0/1:3,12:15:167,0,9
+chr21	25731407	chr21:25731407:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:19:255,55,0	1/1:0,27:27:255,78,0	1/1:0,34:34:255,99,0
+chr21	25742760	chr21:25742760:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,33:34:255,255,255,82,100,0	1/2:0,17,12:30:255,178,124,255,0,224	2/2:0,0,33:33:255,255,255,97,97,0
+chr21	25743585	chr21:25743585:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,3:34:0,44,255	0/1:12,19:33:239,0,116	0/0:30,2:35:0,66,255
+chr21	25744043	chr21:25744043:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:12:9,0,121	0/0:1,0:1:0,3,17	1/1:1,7:9:101,6,0
+chr21	25746010	chr21:25746010:M	TTTTTTTTTTTCTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,2:40:0,81,255	0/1:16,19:35:234,0,180	0/0:36,0:36:0,106,255
+chr21	25755433	chr21:25755433:M	AAAAAAAAAAAAAAAAAAAAA	<15>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0,1:7:0,21,182,3,106,87	0/2:4,0,6:10:70,98,250,0,67,38	1/2:1,14,2:18:255,9,16,255,0,255
+chr21	25756195	chr21:25756195:M	TTTTTATTTTTA	<1.3>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/1:21,34:55:255,0,255	0/1:25,21:46:255,0,255	0/0:47,0:47:0,141,255
+chr21	25775232	chr21:25775232:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:48:0,132,255	0/1:21,15:38:174,0,255	0/0:48,2:50:0,111,255
+chr21	25780241	chr21:25780241:M	TGAATGAATGA	<1.8>	.	.	Motif=TGAA	GT:AD:DP:PL	0/0:49,0:49:0,145,255	0/1:24,22:46:255,0,255	0/0:38,0:38:0,112,255
+chr21	25784517	chr21:25784517:M	GTTTGTTTGTTT	<2.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:21,0:22:0,35,97	0/1:15,17:36:33,0,10	0/0:26,0:26:0,46,125
+chr21	25784526	chr21:25784526:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:17:0,16,215	0/1:4,17:23:214,0,9	0/0:19,1:20:0,42,255
+chr21	25785745	chr21:25785745:M	TTTTCTTTTCTT	<1.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,49:49:255,147,0	1/1:0,39:39:255,117,0
+chr21	25786151	chr21:25786151:M	AAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,0,24:44:255,255,255,0,255,235	0/1:18,22,0:42:255,0,255,255,255,255	0/2:23,0,24:49:255,255,255,0,255,255
+chr21	25789328	chr21:25789328:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:20:0,23,255	0/0:20,3:25:0,3,255	0/1:17,7:27:46,0,255
+chr21	25797941	chr21:25797941:M	AAAAAAAAAAAAATAAATAAATAAATAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,74,255	0/1:12,7:19:125,0,255	0/0:21,0:22:0,65,255
+chr21	25800869	chr21:25800869:M	CAAAAAAACAAACAAACAAA	<4>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:21,15:36:181,0,255	0/0:40,0:40:0,118,255	1/1:0,31:31:255,92,0
+chr21	25800972	chr21:25800972:M	TTTTTTTCTTTTCTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:17,14:33:169,0,203	0/0:16,1:17:0,32,255
+chr21	25804875	chr21:25804875:M	CCCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/1:10,8:18:192,0,210	0/0:19,0:19:0,57,255
+chr21	25805640	chr21:25805640:M	TGTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTT	<6.4>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:14,21:36:255,0,255	0/1:12,19:32:255,0,228
+chr21	25808500	chr21:25808500:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:26:188,0,255	0/1:9,7:18:148,0,186	0/1:11,7:20:134,0,243
+chr21	25809875	chr21:25809875:M	CTCTCTCTCTCGCTTTCTCTCTC	<6.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:21,25:46:255,0,255	0/1:12,29:41:255,0,206	0/0:33,0:33:0,99,255
+chr21	25815569	chr21:25815569:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:5:18,0,27	0/1:7,3:11:15,0,86	0/1:7,4:12:37,0,76
+chr21	25816582	chr21:25816582:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:41:255,0,253	0/1:19,13:32:136,0,241	0/0:48,0:49:0,144,255
+chr21	25819113	chr21:25819113:M	TTTTTCTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:19,0:20:0,58,255	0/1:8,10:20:120,0,103
+chr21	25819625	chr21:25819625:M	ACACACACACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,10:18:245,0,153	0/1:1,12:18:255,0,27	0/1:4,12:17:255,0,66
+chr21	25825746	chr21:25825746:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:33:167,0,250	1/1:0,27:27:255,79,0	0/1:27,23:51:255,0,255
+chr21	25826419	chr21:25826419:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,8,3:17:143,8,54,129,0,242	1/1:2,17,0:25:255,37,0,255,68,255	0/2:5,0,7:14:107,142,255,0,75,49
+chr21	25830138	chr21:25830138:M	AAATAAATAAATAAATAAATAAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:35,0:35:0,103,255	0/1:15,13:28:162,0,200
+chr21	25836137	chr21:25836137:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:34,6,0	0/1:1,4:6:50,0,2	1/1:0,3:4:50,9,0
+chr21	25855579	chr21:25855579:M	AAAAAAAAAAAAA	<10>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10,7:30:184,0,255,158,67,255	0/1:10,9,4:28:162,0,255,159,91,255	0/2:20,5,10:36:31,3,255,0,128,162
+chr21	25855607	chr21:25855607:M	ACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:37:0,90,255	0/1:15,10:35:35,0,196	0/0:26,0:34:0,76,255
+chr21	25860626	chr21:25860626:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3,1:8:68,0,65,38,38,73	1/2:1,3,4:8:111,40,57,33,0,28	0/1:5,4,2:14:109,0,107,63,57,119
+chr21	25865507	chr21:25865507:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,7,0:14:205,0,140,133,160,255	1/1:0,5,0:10:245,27,0,182,27,166	0/2:4,3,6:16:201,51,151,0,63,95
+chr21	25866543	chr21:25866543:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,7:16:84,0,99	1/1:2,12:16:177,3,0	0/1:17,12:30:130,0,230
+chr21	25867440	chr21:25867440:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,4,8:20:140,42,197,0,35,64	1/2:0,14,7:22:255,101,56,246,0,187	0/2:5,1,10:17:144,130,255,0,76,48
+chr21	25873196	chr21:25873196:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6,0:17:57,0,131,89,173,255	1/2:2,5,5:12:152,49,49,37,0,72	0/1:9,7,0:18:71,0,118,102,163,255
+chr21	25873977	chr21:25873977:M	TTTTTTTTTTTTTTTTT	<18>,<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,7,0,5:14:227,120,112,178,89,191,107,0,134,185	0/2:1,0,5,1:7:142,95,95,0,17,9,68,71,10,79	1/3:1,11,2,6:21:255,163,136,231,85,234,181,0,172,255
+chr21	25877608	chr21:25877608:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<8>,<9>	.	.	Motif=TAAA	GT:AD:DP:PL	1/2:0,13,3:16:255,50,11,250,0,207	1/1:0,14,0:14:255,42,0,255,41,255	1/2:0,19,10:29:255,161,104,255,0,255
+chr21	25880010	chr21:25880010:M	TTTATTTATTTATTTATTTATTTATTTATTTATT	<6.5>,<9.5>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,4,4:8:169,76,93,104,0,93	1/1:0,6,0:6:168,18,0,170,18,171	1/2:0,3,3:6:125,56,71,78,0,69
+chr21	25887518	chr21:25887518:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,15:29:255,0,63	0/1:2,11:19:255,0,43	0/1:5,12:22:255,0,88
+chr21	25890723	chr21:25890723:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:171,21,0	0/1:5,3:9:52,0,122	1/1:0,6:8:176,23,0
+chr21	25892047	chr21:25892047:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,9,7:20:255,72,92,133,0,119	1/2:1,9,7:17:255,84,82,136,0,106	1/2:1,17,10:29:255,132,103,255,0,229
+chr21	25892950	chr21:25892950:M	AAAAAAAAAAAACAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,14:28:255,255,184,255,0,184	0/2:14,0,15:29:255,255,255,0,255,255	1/2:0,17,16:33:255,255,199,255,0,218
+chr21	25895111	chr21:25895111:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/1:20,26:50:255,0,255	0/1:25,28:56:255,0,255
+chr21	25895177	chr21:25895177:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:21:255,0,159	0/1:12,17:29:255,0,249	0/1:12,16:29:255,0,250
+chr21	25896414	chr21:25896414:M	ACACTCACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:21,24:47:219,0,185	0/1:17,17:38:138,0,156	0/1:22,21:43:181,0,195
+chr21	25900988	chr21:25900988:M	AAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:7,16:24:255,0,132	1/1:0,23:23:255,69,0
+chr21	25901297	chr21:25901297:M	AAAAAAAAAAAAAAAAAAAAAACAAAA	<15>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,1:6:83,83,83,15,15,0	1/1:0,21,1:24:255,66,0,255,27,255	2/2:0,0,3:4:101,101,101,12,12,0
+chr21	25901399	chr21:25901399:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47:48:255,141,0	0/1:23,25:48:255,0,255	1/1:1,46:49:255,115,0
+chr21	25908693	chr21:25908693:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,30:36:255,0,4	1/1:3,30:34:255,44,0	1/1:5,35:40:255,28,0
+chr21	25924380	chr21:25924380:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,15:18:223,0,2	1/1:2,16:18:244,18,0	1/1:1,10:11:162,14,0
+chr21	25927003	chr21:25927003:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:10,3,0	.	1/1:0,3:3:78,9,0
+chr21	25928343	chr21:25928343:M	AAACAAACAAACAAACAAACAAACAAACAAAAAAAC	<10>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:1,26:27:255,61,0	1/1:0,27:27:255,80,0
+chr21	25928754	chr21:25928754:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:18:255,45,0	1/1:0,14:18:255,50,0	1/1:0,20:26:255,43,0
+chr21	25930587	chr21:25930587:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,27:28:255,82,0	0/1:17,9:26:84,0,229	0/1:17,15:32:182,0,222
+chr21	25935840	chr21:25935840:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:44,8,0	1/1:0,5:5:81,15,0	0/1:1,3:4:39,0,5
+chr21	25946667	chr21:25946667:M	AAAAATAAAAATAAAAATAAAAATAAAAATAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:233,0,255	0/0:29,0:29:0,87,255	0/1:17,18:35:255,0,255
+chr21	25951141	chr21:25951141:M	GGCCAGGGCCAG	<2.2>	.	.	Motif=GGCCAG	GT:AD:DP:PL	1/1:0,35:35:255,97,0	1/1:0,49:49:255,136,0	1/1:0,50:50:255,138,0
+chr21	25952192	chr21:25952192:M	ACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,8:28:55,0,250	0/1:22,12:35:94,0,255	0/1:17,10:27:88,0,204
+chr21	25952379	chr21:25952379:M	TTTTTTTTTTTCTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,40:43:255,71,0	1/1:2,27:29:255,50,0	1/1:2,31:33:255,61,0
+chr21	25964595	chr21:25964595:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,13:16:186,0,7	0/1:3,4:7:48,0,31	0/1:7,10:17:126,0,73
+chr21	25968323	chr21:25968323:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,3:16:3,0,169	0/0:11,1:12:0,19,159	0/1:8,5:14:41,0,99
+chr21	25969834	chr21:25969834:M	GAAAAGAAAAGAAAAGAAAACAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGAAGA	<12.8>	.	.	Motif=GAAAA	GT:AD:DP:PL	1/1:0,5:6:89,17,0	1/1:0,4:5:74,14,0	0/0:6,1:7:0,5,80
+chr21	25980661	chr21:25980661:M	AAACAAACAAACAAAAAACAAAACAAACAAACAAAAAACA	<9.2>,<10.2>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,0,48:48:255,255,255,144,142,0	1/2:0,12,23:35:255,255,255,217,0,116	2/2:0,0,28:28:255,255,255,84,83,0
+chr21	25981712	chr21:25981712:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:12:17,0,120	0/1:11,10:22:103,0,120	0/1:12,3:18:6,0,172
+chr21	25989923	chr21:25989923:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,3:43:0,71,255	0/1:20,28:49:255,0,221	0/0:44,3:47:0,84,255
+chr21	25990438	chr21:25990438:M	AGCAATAGCAATA	<2.7>	.	.	Motif=AGCAAT	GT:AD:DP:PL	0/0:43,0:43:0,129,255	0/1:20,21:41:255,0,255	0/0:47,0:47:0,141,255
+chr21	25992388	chr21:25992388:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:7,25:33:255,0,35	0/0:28,0:31:0,90,255
+chr21	25995945	chr21:25995945:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:26,14:42:135,0,255	0/0:46,0:46:0,136,255
+chr21	25998391	chr21:25998391:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,2,12:27:150,187,255,0,149,161	0/1:11,14,2:29:174,0,130,215,125,255	0/2:15,1,10:27:110,166,255,0,206,200
+chr21	26007431	chr21:26007431:M	TATATTTATAAATTATATATTATATACTATATATTACAATATATAATTATATA	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,3:12:99,0,151	0/0:1,0:1:0,3,25	0/1:6,1:7:21,0,128
+chr21	26009580	chr21:26009580:M	TTTTTCTTTTCTTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,20:22:255,43,0	0/1:14,16:31:195,0,154	1/1:1,22:23:255,50,0
+chr21	26012976	chr21:26012976:M	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAACAAACAAAA	<7>	.	.	Motif=AACAA	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,26:26:255,78,0	1/1:0,30:30:255,90,0
+chr21	26013483	chr21:26013483:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:2,42:46:255,99,0	1/1:1,43:46:255,108,0
+chr21	26016931	chr21:26016931:M	GGGGGGCGGGGGGCGGGGGGCGGGGGG	<10>,<19>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,26,0:26:255,78,0,255,78,255	1/2:0,11,4:15:255,104,71,255,0,255	1/1:0,37,0:37:255,111,0,255,111,255
+chr21	26017199	chr21:26017199:M	AAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:119,12,0	1/1:0,1:2:29,3,0	1/1:0,3:4:88,10,0
+chr21	26017410	chr21:26017410:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:115,20,0	0/1:3,12:15:158,0,7	1/1:0,7:9:131,23,0
+chr21	26021047	chr21:26021047:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:13:215,38,0	0/1:4,6:11:79,0,35	1/1:1,5:8:80,3,0
+chr21	26028177	chr21:26028177:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:25:0,42,255	0/1:12,11:25:135,0,130	0/0:26,2:30:0,52,255
+chr21	26032795	chr21:26032795:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,25,15:40:255,198,123,255,0,255	2/2:0,0,21:21:255,255,255,61,61,0	0/1:14,22,1:37:255,0,255,255,201,255
+chr21	26034639	chr21:26034639:M	AAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAGAAAAGAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:172,17,0	1/1:1,10:14:183,23,0	1/1:0,6:7:114,20,0
+chr21	26040606	chr21:26040606:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:12:82,0,47	0/1:10,6:16:56,0,125	0/1:14,4:18:18,0,195
+chr21	26040762	chr21:26040762:M	AAACAAACAAACAAACAAACAAACAAACA	<8.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/1:17,17:34:209,0,209	0/1:15,18:33:242,0,185
+chr21	26054621	chr21:26054621:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:96,17,0	0/1:4,4:8:42,0,42	0/1:3,2:7:13,0,53
+chr21	26057467	chr21:26057467:M	CACACACCACACACACACACACACACACACACAC	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:30:0,85,255	0/1:15,18:36:213,0,187	0/0:23,0:24:0,70,255
+chr21	26059891	chr21:26059891:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,0,0	.	1/1:0,4:6:145,18,0
+chr21	26062231	chr21:26062231:M	ACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,11:25:195,0,255	0/1:14,7:22:125,0,255	0/0:27,0:30:0,74,255
+chr21	26062662	chr21:26062662:M	AAATAAATAAATAAATAAATAAATAAATAAATA	<9.2>,<11.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,12,3:15:255,79,43,229,0,255	0/2:11,0,6:17:127,157,255,0,198,255	1/1:0,20,0:20:255,59,0,255,60,255
+chr21	26068364	chr21:26068364:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:20:90,0,255	0/1:11,13:28:255,0,217	0/0:18,1:20:0,30,255
+chr21	26074751	chr21:26074751:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,23:43:255,0,235	1/1:0,40:40:255,117,0	0/1:22,21:43:246,0,255
+chr21	26077063	chr21:26077063:M	AAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,14:21:255,24,0	1/1:0,18:19:255,53,0	1/1:1,19:20:255,41,0
+chr21	26079045	chr21:26079045:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,1,2:9:9,17,121,0,71,93	0/1:1,3,0:6:38,0,6,42,6,81	0/2:6,1,5:13:51,59,183,0,61,80
+chr21	26080770	chr21:26080770:M	AAAAAAAAAAAAAAAGAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:16,12:28:120,0,188	0/0:22,1:24:0,50,255
+chr21	26082231	chr21:26082231:M	AAATAAATAAATAAATAAATAA	<6.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:19,9:28:83,0,255	0/1:15,26:41:255,0,162
+chr21	26084228	chr21:26084228:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:23,5,0	1/1:0,3:4:99,12,0	.
+chr21	26086563	chr21:26086563:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,45,0:46:255,117,0,255,135,255	1/2:1,19,21:41:255,255,249,255,0,225	1/1:3,28,4:35:255,48,0,255,29,255
+chr21	26105069	chr21:26105069:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,6:10:84,89,177,2,22,0	1/2:0,5,3:10:193,47,51,129,0,108	0/2:3,0,4:10:53,58,181,0,49,27
+chr21	26108608	chr21:26108608:M	CGGGTGCGGGTG	<1.8>	.	.	Motif=CGGGTG	GT:AD:DP:PL	1/1:0,40:40:255,111,0	1/1:0,48:48:255,133,0	1/1:0,43:43:255,119,0
+chr21	26111088	chr21:26111088:M	AAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,0:11:0,33,255	0/1:2,5:10:124,0,51	0/0:5,0:8:0,23,179
+chr21	26118885	chr21:26118885:M	AAAAAAAAATGAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:33:211,0,189	0/1:16,17:38:198,0,190	0/1:22,13:36:137,0,255
+chr21	26119686	chr21:26119686:M	ACACACACACACACACACACATATACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,19:39:248,0,255	0/1:24,17:41:184,0,255	0/1:14,11:26:128,0,192
+chr21	26126978	chr21:26126978:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,16:29:213,0,157	0/0:38,0:39:0,112,255	0/1:24,11:38:90,0,255
+chr21	26127200	chr21:26127200:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:35:199,0,255	0/1:22,23:46:255,0,255	0/1:20,28:50:255,0,231
+chr21	26131906	chr21:26131906:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,108,255	0/1:22,15:39:255,0,255	0/0:44,0:48:0,138,255
+chr21	26136134	chr21:26136134:M	AAAGAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAAGAAA	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,7:7:78,19,0	.	1/1:0,4:4:44,11,0
+chr21	26138527	chr21:26138527:M	AAAAAAAAAAAAAAAAA	<14>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,11,9:20:255,255,255,143,166,110,204,175,0,148	1/3:1,18,1,12:32:255,194,255,255,203,255,255,0,255,255	2/3:2,0,17,8:27:255,255,255,88,164,91,255,255,0,232
+chr21	26138695	chr21:26138695:M	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	<6.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/1:15,15:30:184,0,184	0/0:41,0:41:0,121,255
+chr21	26139880	chr21:26139880:M	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAA	<8.5>,<9.5>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,1,32:33:255,255,255,97,78,0	1/2:0,15,14:29:255,216,171,255,0,189	2/2:0,1,31:32:255,255,255,94,76,0
+chr21	26150598	chr21:26150598:M	TAGATAGACAGATAGATAGACAGATAGATAGA	<10>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:9,7:19:120,0,166	0/1:10,1:20:3,0,196	0/1:10,20:33:255,0,148
+chr21	26153456	chr21:26153456:M	TTGTTGTTGTTGTTGTT	<6.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:11,12:23:164,0,145	0/0:35,0:35:0,103,255	0/1:13,21:34:255,0,144
+chr21	26156001	chr21:26156001:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,4:11:46,0,72	0/0:6,1:8:0,6,92	0/1:3,3:9:39,0,37
+chr21	26162910	chr21:26162910:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,7:25:59,0,255	0/0:36,0:40:0,116,255	0/1:24,14:38:148,0,255
+chr21	26163066	chr21:26163066:M	AAAAAAAAAAAAAACAAAAACAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,10:23:115,0,171	0/1:15,17:34:198,0,180	0/1:9,4:13:33,0,123
+chr21	26164856	chr21:26164856:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:9,11:22:139,0,88	0/0:23,1:25:0,56,255
+chr21	26164894	chr21:26164894:M	AAAAAAAGAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:151,0,187	0/0:42,1:44:0,111,255	0/1:12,13:26:163,0,153
+chr21	26166872	chr21:26166872:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAAAGAGACAGAG	<19.5>,<20.5>	.	.	Motif=GA	GT:AD:DP:PL	0/2:9,3,9:23:255,74,255,0,207,205	0/1:7,12,0:19:255,0,142,128,174,255	0/2:4,0,15:22:255,162,255,0,132,92
+chr21	26166928	chr21:26166928:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<15>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,13,1:35:121,0,205,194,255,255	0/2:11,0,12:23:243,255,255,0,164,225	0/1:16,18,0:36:189,0,148,255,248,255
+chr21	26172797	chr21:26172797:M	AAAAAAAAGAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:41:255,121,0	1/1:1,33:34:255,82,0	0/1:17,17:34:214,0,216
+chr21	26180161	chr21:26180161:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:17:55,0,143	0/0:13,1:15:0,27,210	0/1:9,10:21:122,0,96
+chr21	26186140	chr21:26186140:M	TTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:88,15,0	0/1:3,2:7:22,0,41	0/1:4,4:9:43,0,54
+chr21	26192948	chr21:26192948:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,21:40:255,0,243	0/1:17,10:27:100,0,225	0/0:38,0:38:0,112,255
+chr21	26193424	chr21:26193424:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,2:21:0,25,255	0/1:10,10:24:143,0,103	0/1:14,12:26:137,0,173
+chr21	26193552	chr21:26193552:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:13:0,4,254	0/1:8,11:21:255,0,164	0/1:9,8:18:173,0,204
+chr21	26193721	chr21:26193721:M	TTTTTTTTGTTCTGTTTTTTTTTTTTTTTTT	<45>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:7:98,13,0	1/1:0,0:4:0,0,0	1/1:0,8:12:235,27,0
+chr21	26194289	chr21:26194289:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:22,0,30:52:255,255,255,0,255,255	0/1:12,22,1:37:255,0,255,255,211,255	1/2:0,21,19:40:255,255,234,255,0,255
+chr21	26197508	chr21:26197508:M	ATACATACATACATACATACATACATACATACATACATACATGCATACATA	<8.8>,<10.8>,<11.8>	.	.	Motif=ATAC	GT:AD:DP:PL	2/3:0,0,9,14:23:255,255,255,189,230,162,146,147,0,80	1/3:0,12,2,16:30:255,255,255,255,219,255,255,0,255,255	1/2:0,15,8,0:24:255,206,161,255,0,255,255,127,255,255
+chr21	26198424	chr21:26198424:M	AAAAAAAAAAAAAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:25:200,0,97	1/1:0,24:24:255,70,0	0/1:19,14:34:155,0,239
+chr21	26198462	chr21:26198462:M	TTTCTTTTTTTTTCTTTT	<1.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:14,16:31:255,0,255	0/1:19,17:36:255,0,255	1/1:0,46:46:255,138,0
+chr21	26202002	chr21:26202002:M	AACAACAACAA	<2.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:15,29:44:255,0,161	0/0:46,0:46:0,135,255	0/1:32,31:63:255,0,255
+chr21	26208416	chr21:26208416:M	AATTTTATTTTTAATTTT	<3.2>	.	.	Motif=AATTTT	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:9,8:17:147,0,172	0/1:21,13:34:220,0,255
+chr21	26209215	chr21:26209215:M	TTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/1:8,11:19:144,0,89	0/1:15,15:30:194,0,194
+chr21	26215457	chr21:26215457:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,8:12:104,0,35	0/1:0,1:5:7,0,16	0/1:1,8:10:107,0,1
+chr21	26216604	chr21:26216604:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,6:24:38,0,247	0/1:7,2:11:3,0,110	1/1:0,11:12:183,24,0
+chr21	26226509	chr21:26226509:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:96,6,0	1/1:0,3:5:61,11,0	0/1:1,4:5:53,0,2
+chr21	26226711	chr21:26226711:M	AGAGAGAAAGAGAGAGAGA	<3.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:23,26:49:255,0,255	0/1:22,26:48:255,0,255	0/0:41,0:41:0,123,255
+chr21	26226759	chr21:26226759:M	AAAAAGAAAAGAAAAGAAATAAAAAAAGAAAAAAGAAAGAAAAAAGAAAA	<22>,<49>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,17:37:255,197,255,255,0,255	1/2:0,9,10:27:255,114,221,201,0,174	1/2:0,9,15:28:255,172,255,200,0,159
+chr21	26235433	chr21:26235433:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,28:44:255,0,99	0/0:34,1:36:0,88,255	0/1:16,17:35:228,0,192
+chr21	26236885	chr21:26236885:M	TGCCCATGCCCA	<1.8>	.	.	Motif=TGCCCA	GT:AD:DP:PL	1/1:0,28:31:255,78,0	1/1:0,23:25:255,64,0	1/1:0,39:40:255,108,0
+chr21	26241099	chr21:26241099:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,7:8:206,127,106,24,6,0	1/2:0,3,12:15:255,199,158,51,0,6	1/2:2,4,9:16:255,104,127,16,0,27
+chr21	26241264	chr21:26241264:M	TTTTGTTTTTTTTTTTATTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:1,13:15:218,26,0	1/1:1,16:17:255,32,0
+chr21	26242421	chr21:26242421:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,24:40:255,0,206	0/0:25,0:26:0,78,255	0/1:13,18:37:255,0,255
+chr21	26243631	chr21:26243631:M	TTTTTCTTTCTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,15:32:191,0,226	0/0:39,0:39:0,115,255	0/1:11,14:25:186,0,128
+chr21	26247353	chr21:26247353:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,27,22:49:255,255,255,255,0,255	2/2:0,2,51:53:255,255,255,156,120,0	1/2:0,29,35:64:255,255,255,255,0,255
+chr21	26249109	chr21:26249109:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:19:137,0,70	0/1:12,4:18:26,0,161	0/1:9,10:19:120,0,101
+chr21	26252985	chr21:26252985:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:9:36,0,53	0/0:4,1:6:0,1,61	1/1:0,3:5:40,1,0
+chr21	26256744	chr21:26256744:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:7:124,21,0	.	1/1:0,7:7:122,21,0
+chr21	26259758	chr21:26259758:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,4:16:255,42,36,165,0,141	0/2:2,1,6:9:85,67,115,0,17,8	1/2:1,6,8:16:249,99,103,92,0,67
+chr21	26262784	chr21:26262784:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:145,0,180	0/0:26,0:28:0,81,255	0/1:12,15:29:187,0,144
+chr21	26264705	chr21:26264705:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,44:45:255,114,0	1/1:0,40:40:255,118,0	1/1:2,60:62:255,146,0
+chr21	26268884	chr21:26268884:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,54:57:255,148,0	1/1:1,33:37:255,90,0	1/1:4,49:54:255,86,0
+chr21	26270944	chr21:26270944:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,49:50:255,147,0	1/1:0,45:45:255,132,0	1/1:0,40:40:255,118,0
+chr21	26279778	chr21:26279778:M	AAAAGAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:30:255,0,119	1/1:1,30:32:255,76,0	0/1:16,10:27:104,0,223
+chr21	26280552	chr21:26280552:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:14:69,0,78	1/1:1,12:15:196,24,0	0/1:9,4:15:44,0,114
+chr21	26280623	chr21:26280623:M	AAAAAAAAAAACAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,19:32:242,0,137	1/1:0,19:19:255,56,0	0/0:21,4:25:0,4,255
+chr21	26284281	chr21:26284281:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,8:21:83,0,155	0/1:3,15:20:198,0,12	0/1:12,7:20:67,0,157
+chr21	26287412	chr21:26287412:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:11:0,6,248	0/0:14,0:19:0,55,255	0/1:9,4:13:70,0,207
+chr21	26288931	chr21:26288931:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGCATGCATGTATGCATGCATGCATGTATGTATGTATGTATGTATGTATGTATGTAT	<12.8>,<15.8>,<16.8>	.	.	Motif=TATG	GT:AD:DP:PL	1/2:0,4,2,0:10:124,38,23,74,0,63,111,29,74,106	2/3:0,0,2,3:5:102,98,95,45,45,32,30,29,0,16	1/2:0,3,3,0:8:123,56,43,55,0,42,105,43,55,98
+chr21	26289027	chr21:26289027:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<14.8>,<16.8>,<17.8>	.	.	Motif=TATC	GT:AD:DP:PL	2/3:0,0,9,8:24:255,255,255,140,140,91,157,157,0,108	0/3:17,0,0,5:22:85,137,255,83,255,255,0,255,255,255	1/2:0,10,6,0:22:255,163,133,255,0,255,255,102,255,255
+chr21	26289692	chr21:26289692:M	TTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:205,24,0	1/1:0,3:6:131,18,0	1/1:0,6:9:210,25,0
+chr21	26291439	chr21:26291439:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:38:255,114,0	1/1:0,32:36:255,99,0	1/1:0,48:50:255,147,0
+chr21	26291833	chr21:26291833:M	AAAAAAAAAAACAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,63,0	1/1:0,20:23:255,65,0	1/1:1,23:25:255,45,0
+chr21	26294961	chr21:26294961:M	TTATTTTATTTTATTTATATTATATTATATTATATTATATTATATTATATTAT	<14.6>,<15.6>	.	.	Motif=TTATA	GT:AD:DP:PL	1/2:0,9,3:12:255,59,23,175,0,140	.	1/2:0,1,1:2:61,19,13,19,0,13
+chr21	26299947	chr21:26299947:M	TTTTTTTGTTTTTTGTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,19:23:255,255,255,63,18,0	1/2:0,3,7:10:255,119,90,51,0,22	2/2:0,0,17:17:255,255,255,51,50,0
+chr21	26311383	chr21:26311383:M	ATATATATATACATGTATATATATATATATGTGCATACATATATACATGTATATATAT	<15>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,5:15:89,0,223	0/0:27,0:27:0,81,255	0/1:7,2:9:26,0,161
+chr21	26311771	chr21:26311771:M	ATATATACACATACATATATACATATATACATATATGTATGTACGTATATATATACATTTATATAT	<10>	.	.	Motif=ATAT	GT:AD:DP:PL	0/1:3,10:13:255,0,38	0/1:5,15:20:255,0,68	1/1:0,16:16:255,48,0
+chr21	26311850	chr21:26311850:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,0,0:34:0,102,255,96,255,255	0/2:13,0,23:39:211,211,255,0,140,66	0/1:13,20,1:35:255,0,220,255,156,255
+chr21	26311874	chr21:26311874:M	TATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:9,1,7:20:54,93,240,0,71,63	0/1:9,10,0:27:115,0,32,172,82,255	1/2:1,11,7:33:194,104,142,134,0,203
+chr21	26325011	chr21:26325011:M	AAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,9,0:25:89,0,207,160,255,255	0/2:14,1,3:22:59,78,255,0,226,255	1/2:1,16,7:25:255,169,134,255,0,255
+chr21	26334783	chr21:26334783:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,24:40:255,0,172	0/0:19,2:21:0,26,255	0/1:15,13:30:159,0,194
+chr21	26334945	chr21:26334945:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<10>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:7,6:13:71,0,89	0/1:3,10:13:150,0,18
+chr21	26351915	chr21:26351915:M	AGAGAGAGAGAGAGAGAGAGTGAGAGAAAGACAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:10,13:23:255,0,202	0/0:26,0:27:0,78,255	0/1:15,14:31:255,0,255
+chr21	26356078	chr21:26356078:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,19:33:255,0,255	0/0:35,0:35:0,105,255	0/1:16,16:32:255,0,255
+chr21	26363925	chr21:26363925:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,20:23:255,48,0	1/1:3,21:24:255,18,0	1/1:0,18:19:255,55,0
+chr21	26365813	chr21:26365813:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,34:34:255,100,0	1/1:0,38:38:255,112,0
+chr21	26367626	chr21:26367626:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:21:84,0,255	1/1:0,16:17:255,51,0	0/1:13,6:22:124,0,255
+chr21	26371726	chr21:26371726:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,8,1:12:255,140,123,21,2,0,152,89,3,125	3/3:0,1,1,11:13:255,255,255,189,172,152,37,6,7,0	1/2:0,3,7,0:11:255,119,87,63,0,32,215,99,62,192
+chr21	26379272	chr21:26379272:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:35,0,34	0/1:1,5:8:72,0,4	1/1:1,7:10:126,12,0
+chr21	26385124	chr21:26385124:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:82,14,0	1/1:2,8:12:124,1,0	1/1:0,8:8:138,23,0
+chr21	26401715	chr21:26401715:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,2:25:0,35,255	0/0:19,0:20:0,58,255	0/1:14,9:23:93,0,182
+chr21	26409615	chr21:26409615:M	ACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,9:25:160,0,255	0/1:12,15:32:255,0,255	0/1:25,9:40:141,0,255
+chr21	26412725	chr21:26412725:M	ACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:9,0,6:17:117,102,234,0,171,228	1/2:0,9,5:14:249,83,43,125,0,110	0/0:13,0,0:14:0,41,236,42,255,255
+chr21	26417907	chr21:26417907:M	TAAAATAAAATAA	<2.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:23,20:43:255,0,255	0/1:15,18:33:255,0,225	0/1:25,19:44:255,0,255
+chr21	26418523	chr21:26418523:M	TGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/1:31,18:52:255,0,255	0/1:20,21:43:255,0,255	0/1:15,32:48:255,0,255
+chr21	26426663	chr21:26426663:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<17.5>,<18.5>,<20.5>	.	.	Motif=AG	GT:AD:DP:PL	0/3:8,0,0,5:14:111,140,255,137,255,255,0,219,219,198	1/3:0,8,1,4:14:255,116,91,222,88,193,234,0,116,219	0/2:3,1,7,0:14:191,95,174,0,77,80,195,176,82,255
+chr21	26428225	chr21:26428225:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:28:255,0,255	1/1:0,25:29:255,80,0	0/1:11,11:24:231,0,243
+chr21	26437131	chr21:26437131:M	GTGTGTGTGTGTGTGTGTGTATGTGTTTGTGT	<24>,<25>	.	.	Motif=GT	GT:AD:DP:PL	0/2:15,1,15:31:255,248,255,0,255,255	1/2:0,12,6:19:255,102,50,203,0,153	0/1:19,6,1:27:106,0,255,87,255,255
+chr21	26443409	chr21:26443409:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,3:30:0,34,255	0/1:10,12:24:137,0,122	0/0:35,0:36:0,105,255
+chr21	26451872	chr21:26451872:M	CACACACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,12:24:147,0,139	1/1:2,18:21:255,27,0	0/0:27,0:27:0,79,255
+chr21	26463243	chr21:26463243:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:25:0,63,255	0/1:11,6:21:106,0,249	0/1:9,4:17:87,0,191
+chr21	26474037	chr21:26474037:M	TTTTTGTTTTCGTTTTTTTTTTTTTTTTG	<4.7>	.	.	Motif=TTTTTG	GT:AD:DP:PL	1/1:0,16:17:255,50,0	1/1:1,23:25:255,56,0	1/1:0,16:17:255,50,0
+chr21	26476577	chr21:26476577:M	CTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAATCTTCTATTATCTATCTATCTATCTA	<17.2>,<21.2>	.	.	Motif=CTAT	GT:AD:DP:PL	0/0:7,0,0:8:0,24,212,23,161,143	0/1:2,5,0:7:123,0,37,129,35,159	2/2:0,0,4:4:74,85,115,12,12,0
+chr21	26480555	chr21:26480555:M	TTTTTCTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:33:255,79,0	1/1:2,20:25:255,37,0	1/1:1,31:34:255,77,0
+chr21	26483413	chr21:26483413:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,22:31:255,0,123	1/1:0,45:46:255,138,0	0/1:12,20:37:255,0,218
+chr21	26486620	chr21:26486620:M	TTTTTTTTTCTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:149,0,226	0/0:42,0:42:0,124,255	0/1:20,13:33:147,0,255
+chr21	26487917	chr21:26487917:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:40:255,113,0	1/1:0,47:48:255,143,0	1/1:0,39:42:255,122,0
+chr21	26487960	chr21:26487960:M	TTTTTTTATTTTGCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30:31:255,93,0	1/1:0,46:47:255,141,0	1/1:0,44:44:255,132,0
+chr21	26488241	chr21:26488241:M	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<12.2>,<13.2>	.	.	Motif=CTTC	GT:AD:DP:PL	0/1:8,7,0:15:89,0,108,113,150,255	1/2:0,16,15:31:255,255,178,241,0,196	0/1:11,8,0:19:92,0,148,125,201,255
+chr21	26492717	chr21:26492717:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,40:42:255,86,0	1/1:1,28:29:255,68,0	1/1:1,44:46:255,117,0
+chr21	26502303	chr21:26502303:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,10,13:24:255,202,169,190,0,125	1/1:0,17,2:22:255,57,0,255,27,255	1/2:0,8,14:24:255,212,185,150,0,87
+chr21	26504225	chr21:26504225:M	TATTTATTTATTTATTTATTTATTT	<8.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:18,17:35:255,0,255	0/0:35,0:35:0,105,255	0/1:16,12:28:255,0,255
+chr21	26511981	chr21:26511981:M	CACACATACACACACACACACACACACACACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,11:33:222,0,255	0/1:8,15:25:255,0,161	0/0:26,0:28:0,83,255
+chr21	26512196	chr21:26512196:M	TTTTTTTATTTATTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:18,10:28:97,0,242	0/0:36,0:36:0,106,255
+chr21	26514067	chr21:26514067:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,34:34:255,100,0	0/1:19,21:40:255,0,227
+chr21	26517115	chr21:26517115:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,5:5:138,15,0	0/0:0,0:1:0,3,13
+chr21	26520114	chr21:26520114:M	ATATATATATATATATATATATATATAT	<9>,<12>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,17,16:34:255,255,255,255,0,255	1/1:0,12,0:13:255,39,0,255,39,255	0/2:7,0,8:17:186,212,255,0,188,159
+chr21	26542278	chr21:26542278:M	TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<25.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,10,10:27:255,249,220,138,0,246	0/1:0,3,0:7:30,0,13,46,25,104	2/2:0,1,12:16:255,255,255,34,10,0
+chr21	26544947	chr21:26544947:M	AACAAAAACAAAAACAAAAA	<1.2>	.	.	Motif=AACAAA	GT:AD:DP:PL	1/1:0,4:4:109,12,0	1/1:0,4:4:110,12,0	1/1:0,2:2:51,6,0
+chr21	26547780	chr21:26547780:M	TTTTTTTTTTTTTTCTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,24,11:35:255,176,103,255,0,255	0/2:13,1,18:33:233,251,255,0,218,145	1/2:0,15,10:27:255,155,105,255,0,218
+chr21	26561314	chr21:26561314:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,12,20:34:255,255,255,210,0,255	0/2:20,1,17:38:187,255,255,0,255,247	0/1:18,19,1:39:241,0,221,255,255,255
+chr21	26567009	chr21:26567009:M	AAAAAAAAAAAAAAAAAAAA	<13>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,20,0,6:29:255,154,113,255,124,255,255,0,255,255	2/3:0,0,5,6:12:255,255,255,101,101,69,86,85,0,54	1/2:0,14,3,0:18:255,90,47,255,0,255,255,60,255,255
+chr21	26571518	chr21:26571518:M	AAACAAACAAACAAACAAACAAA	<4.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:10,15:25:217,0,120	0/0:46,0:46:0,135,255	0/1:17,18:35:236,0,217
+chr21	26581993	chr21:26581993:M	TTTACTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<9>,<12>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,15,0:28:255,0,255,255,248,255	1/2:0,11,4:15:255,72,78,255,0,255	0/0:19,0,0:19:0,57,255,56,255,255
+chr21	26583559	chr21:26583559:M	ACACACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/1:17,15:32:176,0,212	0/1:21,30:51:255,0,240
+chr21	26583616	chr21:26583616:M	TATATATATATATAATGTGTATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:14,12:26:157,0,190	0/1:19,7:26:51,0,255	0/0:21,0:21:0,62,255
+chr21	26584093	chr21:26584093:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/1:16,15:32:172,0,200	0/1:17,20:38:255,0,209
+chr21	26596831	chr21:26596831:M	AAATAAATAAATAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:24,20:44:255,0,255	0/1:12,17:29:255,0,239	0/0:41,0:41:0,123,255
+chr21	26599354	chr21:26599354:M	GTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,6,6:13:255,255,255,163,162,138,159,104,0,138	1/3:1,14,1,5:21:255,124,94,255,118,255,221,0,221,255	1/2:1,14,9,0:24:255,133,81,179,0,178,255,151,245,255
+chr21	26618920	chr21:26618920:M	AAAAAAAAAAAAA	<14>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20,0:37:255,0,190,255,255,255	0/2:11,0,8:19:183,216,255,0,189,255	1/2:1,13,16:32:255,255,255,212,0,255
+chr21	26620910	chr21:26620910:M	GTGTGTGTGCATGCGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:22,0:25:0,63,255	0/1:15,14:33:117,0,132	0/1:15,16:38:145,0,130
+chr21	26626951	chr21:26626951:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:0,0,0	1/1:0,1:4:62,9,0	1/1:0,3:5:123,15,0
+chr21	26628410	chr21:26628410:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,23,15:41:255,242,255,255,0,255	1/2:3,17,18:38:255,255,255,249,0,255	2/2:0,0,29:33:255,255,255,96,98,0
+chr21	26628921	chr21:26628921:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,14:24:255,255,255,220,0,178	2/2:0,0,16:16:255,255,255,48,48,0	1/2:0,7,8:18:255,203,178,214,0,190
+chr21	26629167	chr21:26629167:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,23,11:35:255,193,253,255,0,255	1/1:2,31,0:33:255,61,0,255,93,255	1/2:0,15,16:31:255,255,255,255,0,255
+chr21	26630679	chr21:26630679:M	TGTGTGTGTATGTGTGTGTGTGTGTGT	<11.5>,<12.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,2,14:21:209,164,158,45,19,0	1/1:0,13,0:21:255,48,0,244,44,203	1/2:0,9,18:29:255,187,154,139,0,60
+chr21	26632239	chr21:26632239:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:0,0,0	1/1:0,3:4:108,12,0	1/1:0,2:3:73,6,0
+chr21	26638122	chr21:26638122:M	TATATATATATATATATATACACATATATATATATATATGTATATATAT	<8.5>,<18.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:2,0,5:8:123,131,191,0,60,45	1/2:0,14,6:20:255,156,114,255,0,255	0/1:2,11,0:15:255,0,34,255,67,255
+chr21	26638345	chr21:26638345:M	TATATATATATATATATA	<18>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,3:12:39,0,194	1/1:0,1:1:25,3,0	0/0:15,0:16:0,48,255
+chr21	26639690	chr21:26639690:M	GTGTGTGGGTGTCTATGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<25>,<31>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,3,0,3:9:103,70,61,111,70,141,41,0,71,62	2/3:0,0,2,2:5:100,100,100,49,49,43,51,51,0,45	1/2:0,4,4,0:8:144,101,89,54,0,83,155,101,95,196
+chr21	26642320	chr21:26642320:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/1:19,25:44:255,0,238	0/1:25,18:44:198,0,255	0/0:44,0:44:0,130,255
+chr21	26645859	chr21:26645859:M	ATAAAAACAAAAAAGAAAATAAAAATA	<3.7>	.	.	Motif=ATAAAA	GT:AD:DP:PL	0/1:16,24:40:255,0,255	0/1:15,15:30:255,0,255	0/0:36,0:36:0,108,255
+chr21	26646887	chr21:26646887:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,23:47:255,255,255,255,0,255	1/2:0,14,21:36:255,255,255,255,0,255	2/2:1,0,43:46:255,255,255,117,132,0
+chr21	26650125	chr21:26650125:M	GAAAAAGAAAAGGAAAAAGA	<3.5>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:19,24:43:255,0,255	0/1:28,19:47:255,0,255	0/0:37,0:37:0,110,255
+chr21	26651820	chr21:26651820:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:41:255,0,255	0/1:25,19:46:255,0,255	0/0:40,0:42:0,123,255
+chr21	26653445	chr21:26653445:M	TTTTTTTTTTTTTTTTTT	<13>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,0,11:19:166,214,255,0,108,53	1/2:0,21,5:30:255,93,76,255,0,255	0/2:6,0,9:19:136,182,255,0,113,61
+chr21	26658481	chr21:26658481:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:15,6:22:113,0,255	0/0:32,0:32:0,96,255
+chr21	26665544	chr21:26665544:M	CTTTCTTTCTTTCTTT	<3>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:7,28:35:255,0,24	0/0:41,0:41:0,121,255
+chr21	26679776	chr21:26679776:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:20:0,59,255	1/1:2,18:20:255,24,0	0/0:37,6:44:0,21,255
+chr21	26681384	chr21:26681384:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,19:48:212,0,255	1/1:3,28:32:255,41,0	0/0:51,1:56:0,143,255
+chr21	26697932	chr21:26697932:M	AAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,19:22:255,255,255,0,60,4	0/2:1,0,17:22:255,255,255,0,55,1	1/1:1,20,1:22:255,35,0,255,44,255
+chr21	26698764	chr21:26698764:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:28:109,0,221	0/1:15,15:32:180,0,180	0/0:37,0:38:0,112,255
+chr21	26700305	chr21:26700305:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,26,18:44:255,255,218,255,0,255	1/2:0,27,26:53:255,255,255,255,0,255	1/2:0,37,24:61:255,255,255,255,0,255
+chr21	26706669	chr21:26706669:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<11.2>,<12.2>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:16,8,0:24:84,0,240,132,255,255	0/2:14,0,15:30:255,255,255,0,255,255	1/1:0,22,0:22:255,65,0,255,65,255
+chr21	26707896	chr21:26707896:M	GATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<11>	.	.	Motif=GATA	GT:AD:DP:PL	0/0:12,0:19:0,42,255	0/1:10,14:27:255,0,190	0/1:13,17:38:255,0,255
+chr21	26708936	chr21:26708936:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/1:8,13:21:182,0,87	1/1:1,33:34:255,83,0	0/1:9,12:21:159,0,103
+chr21	26714260	chr21:26714260:M	TTTTGTTTTGTTTTGTTTTGTTCTGTTT	<6.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:29,0:29:0,85,255	0/1:14,13:27:164,0,183
+chr21	26717745	chr21:26717745:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGT	<25.5>,<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,3,0,7:10:194,126,201,179,204,244,91,0,54,74	2/3:1,0,6,2:9:96,105,162,19,62,39,88,105,0,166	0/1:11,8,0,0:19:193,0,255,139,191,255,232,192,255,255
+chr21	26719085	chr21:26719085:M	AAAAAAAAAAAAAAAGAAAAAAAGAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:16:194,0,146	1/1:0,18:19:255,54,0	0/1:3,11:14:252,0,44
+chr21	26721320	chr21:26721320:M	AAAAAAAAAAAGAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,17,0:31:230,0,173,255,224,255	1/2:0,17,17:34:255,255,255,255,0,255	0/1:18,26,0:45:255,0,200,255,255,255
+chr21	26721683	chr21:26721683:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:21:255,63,0,255,60,255	1/2:0,6,4:11:255,106,85,166,0,147	1/2:0,12,1:17:255,27,32,255,0,255
+chr21	26722340	chr21:26722340:M	TTTCTTTTTTTTTCTTTT	<3.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,25:25:255,75,0	0/1:24,19:43:255,0,255	0/1:22,23:45:255,0,255
+chr21	26724731	chr21:26724731:M	TGTTTTTTTTTTTTTTTTGTTTTTG	<4>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/0:9,1:10:0,10,152	0/1:4,9:15:138,0,36	0/0:13,0:13:0,38,250
+chr21	26725779	chr21:26725779:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:5:3,0,55	0/1:3,4:7:46,0,30	0/1:3,1:4:6,0,40
+chr21	26727602	chr21:26727602:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,85,255	0/1:14,11:28:111,0,161	0/0:37,0:39:0,111,255
+chr21	26734714	chr21:26734714:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:33:219,0,180	1/1:4,35:40:255,47,0	0/1:15,13:29:160,0,187
+chr21	26742280	chr21:26742280:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:146,15,0	0/0:0,0:4:0,0,0	1/1:0,10:11:255,30,0
+chr21	26742481	chr21:26742481:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,10:18:128,0,85	1/1:1,4:9:73,4,0	0/1:3,6:12:95,0,21
+chr21	26746256	chr21:26746256:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,2,36:40:255,255,255,96,70,0	1/2:2,15,21:38:255,255,255,229,0,157	1/2:0,20,18:42:255,255,213,255,0,255
+chr21	26746899	chr21:26746899:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:25:199,0,255	0/1:10,9:20:189,0,215	0/0:23,0:27:0,74,255
+chr21	26762626	chr21:26762626:M	AAAAAAAAAAAAAAAAAAAA	<21>,<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,4,3:7:193,151,138,53,52,32,70,59,0,50	1/2:0,3,1,0:5:68,17,5,42,0,39,67,14,50,94	1/2:0,2,3,0:5:109,51,37,29,0,20,85,43,34,94
+chr21	26764388	chr21:26764388:M	CACACACACACACACACACACACACACACACACACAC	<14.5>,<15.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,65,255	1/2:0,10,8:19:255,137,82,179,0,127	1/2:0,12,8:20:255,141,83,210,0,154
+chr21	26765106	chr21:26765106:M	TGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<19>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,12,0:24:154,0,146,190,210,255	1/2:0,5,6:11:227,104,74,74,0,56	0/2:16,1,10:31:218,163,255,0,255,255
+chr21	26766282	chr21:26766282:M	ACACACACACACACACACACACACACACACACACACATACCCACACACATACACACACACA	<26.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,4,4:8:166,69,96,108,0,96	1/1:0,5,0:7:161,17,0,154,9,151	0/2:1,0,3:4:39,51,109,0,17,5
+chr21	26767776	chr21:26767776:M	ACACACACACACACACACACACACACACACACACACACACAC	<17>,<18>,<22>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,12,0:26:255,215,139,249,0,175,255,215,249,255	0/2:8,0,11,0:19:255,186,255,0,222,190,255,255,135,255	1/3:1,13,1,6:22:255,86,136,255,150,255,255,0,200,255
+chr21	26768757	chr21:26768757:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:33:0,78,255	0/1:12,9:21:105,0,156	0/1:13,13:26:172,0,168
+chr21	26770320	chr21:26770320:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,33:34:255,100,0	1/1:0,35:36:255,106,0
+chr21	26770853	chr21:26770853:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,2:41:0,81,255	0/1:19,25:45:255,0,201	0/0:42,2:46:0,99,255
+chr21	26772465	chr21:26772465:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:8:31,0,66	0/0:10,2:12:0,1,136	0/1:3,9:14:134,0,15
+chr21	26775179	chr21:26775179:M	TTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:26:255,77,0	0/1:14,8:27:203,0,255	0/1:25,10:38:179,0,255
+chr21	26776964	chr21:26776964:M	ACACACACACACACACACACACACACACACACA	<19.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,13,0,0:30:255,0,255,255,255,255,255,255,255,255	0/3:10,0,2,10:23:255,255,255,82,255,255,0,252,230,229	1/2:0,9,8,2:24:255,212,153,224,0,174,255,76,205,255
+chr21	26786802	chr21:26786802:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:52,2:55:0,126,255	0/1:18,15:33:178,0,233
+chr21	26813982	chr21:26813982:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:37:0,72,255	0/1:16,22:41:255,0,180	0/1:21,19:40:225,0,255
+chr21	26814938	chr21:26814938:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,11:20:133,0,89	1/1:1,14:17:215,27,0	0/0:12,1:16:0,21,188
+chr21	26815095	chr21:26815095:M	AAACAAACAAACAAACAAAACAAAAAAC	<7.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:17,11:28:220,0,255	1/1:0,24:24:255,72,0	0/1:15,12:27:251,0,255
+chr21	26816216	chr21:26816216:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTGTGTGTGTGTGTGTATGTGTGTGTCTGTGT	<36.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,5:6:59,3,0	1/1:0,3:6:43,9,0	1/1:0,2:5:40,8,0
+chr21	26816399	chr21:26816399:M	ATATATATATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,15:29:255,0,202	0/1:21,13:37:216,0,255	0/0:34,1:35:0,80,255
+chr21	26816417	chr21:26816417:M	ACACACACACACACACACACACACACACACACA	<13.5>,<14.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:2,1,7,3:15:159,93,160,23,84,67,127,84,0,233	1/2:0,12,4,0:16:255,49,2,141,0,93,255,50,141,255	2/3:3,4,4,4:15:166,24,117,25,65,81,115,8,0,199
+chr21	26824985	chr21:26824985:M	GAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAA	<5.8>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:1,2:5:39,0,20	0/1:1,4:5:75,0,10	0/0:2,0:2:0,6,47
+chr21	26829295	chr21:26829295:M	GATAGATAGAGAGATCTAGATAGATCTAGATAGATAGATAGATAGATAGATAGA	<12.5>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:12,16:28:227,0,147	1/1:0,11:11:200,32,0	0/1:9,10:19:132,0,112
+chr21	26849665	chr21:26849665:M	TTTTTTTTTTTTTTTT	<17>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,4:14:181,106,83,93,0,157	1/2:0,5,6:13:220,166,150,69,0,120	0/1:10,1,0:21:25,0,76,23,80,255
+chr21	26856469	chr21:26856469:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,21:41:255,0,249	1/1:0,30:33:255,86,0	0/1:16,15:32:178,0,206
+chr21	26863306	chr21:26863306:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,4:5:56,69,111,0,15,3	1/2:0,9,2:14:168,32,16,164,0,231	0/2:2,0,9:12:131,161,255,0,30,0
+chr21	26864743	chr21:26864743:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,18:27:249,0,75	0/1:11,11:25:141,0,120	0/1:5,11:16:149,0,42
+chr21	26868351	chr21:26868351:M	GTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,16,7:25:255,112,144,255,0,255	1/2:0,24,6:31:255,106,86,255,0,255	1/2:0,13,12:27:255,217,255,255,0,255
+chr21	26876593	chr21:26876593:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<7.5>,<20.5>,<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,0,4,0:24:12,72,255,0,255,225,35,255,255,255	1/2:1,8,9,0:24:255,138,252,190,0,178,255,95,206,255	0/3:9,1,0,5:20:84,100,255,44,185,171,0,210,161,206
+chr21	26876629	chr21:26876629:M	GCGCGCGTGCGCGCGCGCGCGC	<7>	.	.	Motif=GC	GT:AD:DP:PL	1/1:0,11:12:255,36,0	1/1:0,22:25:255,75,0	1/1:1,14:18:255,28,0
+chr21	26879466	chr21:26879466:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:4:0,12,70	1/1:0,1:3:38,8,0	0/1:1,3:4:40,0,5
+chr21	26882714	chr21:26882714:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:28:255,0,235	0/0:20,1:26:0,48,255	0/1:8,12:28:255,0,166
+chr21	26883167	chr21:26883167:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,10:26:255,177,226,209,0,255	0/1:18,14,1:33:149,0,230,224,246,255	1/2:2,18,8:29:255,110,148,255,0,255
+chr21	26885723	chr21:26885723:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:32:184,0,217	0/1:19,24:45:255,0,226	0/1:12,16:28:214,0,137
+chr21	26904803	chr21:26904803:M	AAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:13:67,0,163	0/1:7,4:13:67,0,175	0/1:6,3:10:62,0,135
+chr21	26911752	chr21:26911752:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:5,14:21:255,0,79	0/1:8,20:33:255,0,159
+chr21	26919217	chr21:26919217:M	TTTTTTATTTGTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:178,0,206	0/0:27,3:30:0,37,255	0/1:13,17:32:218,0,146
+chr21	26926668	chr21:26926668:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:21:255,60,0	0/1:8,6:16:78,0,89	0/1:8,16:26:221,0,64
+chr21	26941373	chr21:26941373:M	AACAGAAACAGA	<2.3>	.	.	Motif=AACAGA	GT:AD:DP:PL	1/1:0,37:37:255,111,0	0/1:16,34:50:255,0,255	0/1:25,23:48:255,0,255
+chr21	26945151	chr21:26945151:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,36:40:255,63,0	0/1:19,20:39:235,0,216	0/1:19,22:41:255,0,220
+chr21	26949137	chr21:26949137:M	ATATATATATATATATATCACACATATATCCATATATATATATCACACATATATATATATAT	<32>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,11:15:142,18,0	0/1:9,8:19:69,0,64	0/1:12,5:18:25,0,107
+chr21	26949200	chr21:26949200:M	GAGAGAGAGAGAGAGAGAGAGAGAG	<13.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,24:25:255,71,0	0/1:7,9:17:102,0,79	0/1:18,11:30:103,0,234
+chr21	26957430	chr21:26957430:M	ATAGATAGATGGATAGATGATAGATAGATAGATAGATAGATAGATAGATA	<11.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,20:20:255,59,0	0/1:8,8:16:98,0,97	0/1:10,4:14:34,0,146
+chr21	26980002	chr21:26980002:M	AAAAAAAAAAAAATAATAAAAAATAAAAAAAA	<34>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,11:22:255,201,139,199,0,138	1/2:1,8,9:19:255,130,105,114,0,98	1/2:0,3,15:19:255,255,215,54,0,9
+chr21	26986375	chr21:26986375:M	AAAACAAAACAAAACA	<4.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,27:30:255,74,0	0/1:14,17:32:255,0,255	0/1:19,14:36:255,0,255
+chr21	26987399	chr21:26987399:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,9:14:213,112,127,51,0,28	1/1:0,4,0:5:114,12,0,77,12,66	1/2:1,5,3:10:163,26,33,77,0,68
+chr21	26997705	chr21:26997705:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,39:39:255,115,0	1/1:0,40:40:255,118,0
+chr21	27012585	chr21:27012585:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7,1:9:111,9,0,90,9,110	1/2:0,2,3:6:108,56,41,27,0,15	1/2:1,2,2:5:56,16,18,11,0,30
+chr21	27015316	chr21:27015316:M	TTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:8,8:16:108,0,108	0/1:16,14:30:166,0,203	0/1:19,7:27:53,0,255
+chr21	27021023	chr21:27021023:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,11:28:254,0,191	0/1:16,12:28:247,0,255	0/1:16,12:32:255,0,255
+chr21	27029599	chr21:27029599:M	GTGTGTATGTGTGTGTGTGTGTGTGTG	<12.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,21:41:255,0,236	0/1:11,10:21:115,0,133	0/1:21,17:40:209,0,255
+chr21	27031040	chr21:27031040:M	CATTCATTCATTCATTC	<8.2>,<9.2>	.	.	Motif=CATT	GT:AD:DP:PL	1/2:0,20,15:35:255,255,188,255,0,255	1/2:0,16,17:33:255,255,213,255,0,195	1/1:0,29,0:29:255,87,0,255,86,255
+chr21	27032693	chr21:27032693:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:24:112,0,138	0/1:6,7:16:103,0,56	0/1:7,9:18:114,0,80
+chr21	27038060	chr21:27038060:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/0:30,1:31:0,73,255	0/1:18,13:32:150,0,229
+chr21	27038723	chr21:27038723:M	ATATATATATTATATATATATAT	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:18,16:34:214,0,247	0/1:12,7:19:73,0,162	0/1:22,8:30:64,0,255
+chr21	27041912	chr21:27041912:M	TTTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,0,10:23:121,184,255,0,220,168	0/0:32,0,0:34:0,96,255,99,255,255	0/1:18,19,0:38:255,0,255,255,255,255
+chr21	27042351	chr21:27042351:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,47,255	0/1:17,5:24:25,0,230	0/1:3,10:14:145,0,12
+chr21	27045046	chr21:27045046:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:26:0,75,255	0/1:14,4:22:60,0,255	0/1:5,14:21:255,0,76
+chr21	27046453	chr21:27046453:M	ACACACACACACACACACACACACACACACACACACATACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:10,0:12:0,33,255	0/1:13,15:29:255,0,255
+chr21	27048700	chr21:27048700:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,1,1:43:0,98,255,105,255,255	0/2:20,2,21:44:255,255,255,0,255,252	0/1:17,23,0:40:255,0,197,255,255,255
+chr21	27052291	chr21:27052291:M	TATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:25,0:26:0,76,255	0/1:17,14:31:170,0,226
+chr21	27059475	chr21:27059475:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/0:26,0:36:0,99,255	0/1:23,12:39:221,0,255
+chr21	27059489	chr21:27059489:M	TCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:21,11:36:156,0,255	0/1:28,8:39:79,0,255
+chr21	27061705	chr21:27061705:M	AAATAAATAAATAAATAAATAAATAAATAAA	<8.8>,<9.8>,<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,10,11,0:21:255,213,154,167,0,134,255,213,194,255	1/3:0,10,0,4:15:255,121,91,255,109,255,181,0,179,255	2/2:0,0,14,0:16:255,255,255,42,41,0,255,255,33,255
+chr21	27068129	chr21:27068129:M	CTAAAACTAAAA	<2.3>	.	.	Motif=CTAAAA	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:19,17:36:255,0,255	0/1:20,18:38:255,0,255
+chr21	27069922	chr21:27069922:M	AAGAGAAAGAGAAGGAGAA	<2.7>	.	.	Motif=AAGAGA	GT:AD:DP:PL	0/0:36,0:36:0,108,255	0/0:37,0:37:0,111,255	0/1:15,20:35:255,0,255
+chr21	27070430	chr21:27070430:M	AAAAAAAAAAAAAGAAAAGAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1,0:44:0,110,255,128,255,255	0/1:21,14,0:37:135,0,255,204,255,255	0/2:16,2,9:28:190,136,255,0,251,255
+chr21	27070466	chr21:27070466:M	AAAAAAAAAATAAGAAAAAAATAAAAAAATAAAAAATAAAAA	<43>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:9,10:20:121,0,108	0/0:25,0:25:0,74,255
+chr21	27070523	chr21:27070523:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,1:41:0,102,255	0/1:19,12:34:125,0,255	0/0:46,2:51:0,113,255
+chr21	27072946	chr21:27072946:M	TTTTTTTTTCTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:36,1:37:0,91,255	0/1:12,17:30:232,0,131
+chr21	27079287	chr21:27079287:M	TCTCGCTCTCTCTCCCTCTCTCTCTTTCTCTGTCTCTC	<20>	.	.	Motif=TC	GT:AD:DP:PL	0/0:15,2:17:0,22,170	0/1:10,12:22:92,0,66	0/0:24,4:28:0,26,255
+chr21	27084962	chr21:27084962:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:11,7:18:67,0,134	0/1:6,6:12:70,0,69
+chr21	27085793	chr21:27085793:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/1:17,13:31:147,0,208	0/0:30,1:32:0,75,255
+chr21	27086775	chr21:27086775:M	AAAAAACAAAACAAACAAACAAACAAACAAAAAAAAAA	<33>,<37>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,12:21:165,223,255,0,167,108	1/2:0,7,14:21:255,245,255,177,0,136	0/2:17,0,16:34:194,255,255,0,255,223
+chr21	27103259	chr21:27103259:M	TATATATATATATATATATATATATAT	<10.5>,<12.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:2,0,33,0:37:255,255,255,73,105,0,255,255,110,255	1/2:0,12,8,0:21:255,131,169,255,0,255,255,214,255,255	2/3:1,0,9,6:18:255,255,255,145,175,144,143,252,0,249
+chr21	27107708	chr21:27107708:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,39:40:255,99,0	0/1:21,17:38:191,0,255	0/1:14,23:38:255,0,147
+chr21	27116215	chr21:27116215:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:151,26,0	1/1:0,3:4:52,9,0	0/1:4,1:5:3,0,55
+chr21	27134124	chr21:27134124:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<17.5>,<18.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:20,0,0:22:0,63,255,66,255,255	0/1:19,19,0:39:255,0,255,255,255,255	0/2:17,1,15:34:255,245,255,0,255,255
+chr21	27136797	chr21:27136797:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/0:26,0:27:0,79,255	0/1:12,17:29:221,0,130
+chr21	27139200	chr21:27139200:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/1:18,8:26:146,0,255	0/0:27,0:28:0,84,255
+chr21	27143123	chr21:27143123:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:36:0,87,255	0/1:19,15:35:168,0,227	0/1:14,10:25:115,0,178
+chr21	27148034	chr21:27148034:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<14.5>,<22>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,10,0:11:255,33,0,255,33,255	1/2:0,19,10:32:255,255,229,255,0,255	1/2:0,14,0:18:255,47,5,255,0,255
+chr21	27149732	chr21:27149732:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47,0:47:255,138,0,255,141,255	1/2:2,21,22:45:255,255,255,255,0,255	0/1:16,26,2:46:255,0,161,255,195,255
+chr21	27151654	chr21:27151654:M	ACACACACACACACACATACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,26:26:255,77,0	0/1:19,21:40:255,0,226	0/1:15,30:45:255,0,148
+chr21	27153416	chr21:27153416:M	AGAGAGAGAGAGAGAGAGATAGAG	<13>,<16>	.	.	Motif=AG	GT:AD:DP:PL	2/2:0,0,33:36:255,255,255,107,107,0	1/2:0,12,5:17:255,129,93,212,0,255	0/2:14,0,8:23:181,222,255,0,255,255
+chr21	27155237	chr21:27155237:M	AAAACCAAACCAAAACAAACAAGAAAGAACAAAACAA	<8.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,24:24:255,72,0	0/1:7,12:19:249,0,125
+chr21	27158953	chr21:27158953:M	AAAAAAAAAAAAAGAAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:25:0,63,255	0/0:15,0:17:0,47,255	0/1:7,12:21:255,0,113
+chr21	27159918	chr21:27159918:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:37:0,100,255	0/1:12,11:25:218,0,255	0/0:33,0:34:0,101,255
+chr21	27162693	chr21:27162693:M	TTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:34:0,98,255	0/1:14,5:19:87,0,255	0/0:46,0:53:0,156,255
+chr21	27167102	chr21:27167102:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,20,112	0/1:5,6:13:80,0,45	0/0:8,1:9:0,9,118
+chr21	27167875	chr21:27167875:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:45:0,114,255	0/1:23,22:47:229,0,255	0/1:21,29:50:255,0,211
+chr21	27170090	chr21:27170090:M	GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTG	<17.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:31,0,0:31:0,93,255,92,255,255	0/1:12,15,0:27:255,0,255,255,210,255	0/2:18,0,24:42:255,255,255,0,255,210
+chr21	27171002	chr21:27171002:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:5:6,0,34	0/1:1,3:5:47,0,2	0/0:1,0:1:0,3,17
+chr21	27172720	chr21:27172720:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4,2:10:39,0,61,34,23,122	0/2:2,0,2:6:38,51,97,0,27,16	0/2:3,0,5:8:60,82,167,0,42,27
+chr21	27174600	chr21:27174600:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:21:0,54,255	0/0:15,0:15:0,45,255	0/1:15,7:24:130,0,255
+chr21	27177682	chr21:27177682:M	TTACTTACTTAC	<2>	.	.	Motif=TTAC	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:24,28:52:255,0,255	0/1:20,29:49:255,0,232
+chr21	27179550	chr21:27179550:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,1:8:3,0,159	0/0:15,0:15:0,45,255	0/1:7,7:17:151,0,146
+chr21	27182356	chr21:27182356:M	ATCTATCTATCTATCTATCTATCTATCTAT	<5.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:4,6:13:137,0,69	0/0:26,0:26:0,78,255
+chr21	27186560	chr21:27186560:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1,1:4:18,0,59,8,17,34	0/1:3,4,0:11:121,0,66,102,49,141	0/2:2,0,6:8:79,101,200,0,34,11
+chr21	27186863	chr21:27186863:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGT	<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,7:7:118,137,202,20,21,0	1/2:0,6,1:10:110,15,1,114,0,168	1/2:2,4,4:11:76,37,89,38,0,90
+chr21	27188142	chr21:27188142:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/1:13,7:21:58,0,171	0/0:32,2:38:0,47,255
+chr21	27193593	chr21:27193593:M	GAGAGAGAGAGAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,28:29:255,87,0	1/1:0,28:28:255,84,0
+chr21	27194368	chr21:27194368:M	AAAAAAAAAAAAAAGCAAAAAACAAAAGAACAAAAAACAAAACAAACAAAAAAAA	<60>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:72,9,0	1/1:0,2:4:79,11,0	1/1:0,4:5:128,15,0
+chr21	27198459	chr21:27198459:M	TTCTTTCTTTATTCTTTTTTTCTT	<6.8>	.	.	Motif=TTCT	GT:AD:DP:PL	1/1:0,6:6:252,18,0	1/1:0,11:11:255,33,0	1/1:0,13:13:255,39,0
+chr21	27198602	chr21:27198602:M	ATTATTATTATTATTATT	<6.3>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:27,15:44:0,6,59	0/1:22,18:46:6,0,43	0/0:41,0:45:0,76,202
+chr21	27198618	chr21:27198618:M	TTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,14:42:255,0,255	0/1:19,14:36:255,0,255	0/0:39,0:41:0,118,255
+chr21	27223734	chr21:27223734:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:47:0,119,255	0/0:33,0:35:0,102,255	0/1:19,16:37:185,0,238
+chr21	27228563	chr21:27228563:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,33:34:255,99,0	1/1:0,36:36:255,106,0
+chr21	27233281	chr21:27233281:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<17>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/0:28,0:29:0,85,255	0/1:13,15:28:189,0,152
+chr21	27238205	chr21:27238205:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:32,0:33:0,98,255	0/0:46,0:46:0,135,255	0/1:19,25:44:255,0,227
+chr21	27249823	chr21:27249823:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:10,12:23:141,0,108	0/0:20,0:22:0,64,255
+chr21	27259481	chr21:27259481:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:34:130,0,255	0/0:16,0:18:0,52,255	0/0:24,0:25:0,73,255
+chr21	27260895	chr21:27260895:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<11.8>,<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,10,15:25:255,255,212,162,0,117	1/1:0,7,0:7:126,21,0,126,21,126	2/2:0,0,18:18:255,255,255,54,53,0
+chr21	27277660	chr21:27277660:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,19:23:255,58,0	1/1:0,24:28:255,82,0
+chr21	27278342	chr21:27278342:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,30:32:255,57,0	1/1:1,25:26:255,59,0	1/1:1,25:26:255,58,0
+chr21	27279983	chr21:27279983:M	TTTTTAATTTTTATTTTATTATTATTATTATTATTATTATTATTATTATTATTATT	<6.3>,<6.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	1/1:0,26,0:28:255,78,0,255,70,255	1/1:0,13,0:14:255,39,0,185,35,149	1/2:0,11,10:24:255,119,56,132,0,70
+chr21	27283284	chr21:27283284:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:10:217,3,0	1/1:0,5:6:133,15,0	1/1:0,5:6:134,15,0
+chr21	27289363	chr21:27289363:M	ATATATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:0,44:44:255,130,0	1/1:0,42:43:255,126,0
+chr21	27291239	chr21:27291239:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,21:36:255,0,169	0/0:19,3:23:0,15,255	0/1:15,14:30:174,0,180
+chr21	27297370	chr21:27297370:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,5:22:255,80,29,255,0,253	1/1:0,30,2:34:255,96,0,255,64,255	1/2:1,11,12:24:255,166,157,180,0,130
+chr21	27298892	chr21:27298892:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:11:87,0,12	0/1:4,9:15:111,0,30	0/1:2,2:4:21,0,21
+chr21	27300538	chr21:27300538:M	TTTTTTATTTTTATTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,25:47:255,0,255	1/1:0,30:30:255,88,0	0/1:16,26:42:255,0,176
+chr21	27303089	chr21:27303089:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:31:174,0,220	0/0:33,0:34:0,100,255	0/1:20,27:47:255,0,229
+chr21	27312623	chr21:27312623:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:38,0,16	1/1:0,2:3:46,9,0	0/1:0,1:5:8,0,18
+chr21	27321410	chr21:27321410:M	TATCTATCATCTATCTTATCTATCTATCTATCTATCTATCTATCATCTATCTATCCACCTACCTATCTATC	<19.8>,<20.8>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,0,6:6:174,131,116,18,18,0	1/1:0,4,0:4:115,12,0,83,12,73	2/2:0,0,2:2:58,43,38,6,6,0
+chr21	27321658	chr21:27321658:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,37:38:255,111,0	1/1:0,40:40:255,120,0
+chr21	27322683	chr21:27322683:M	TGTGTGTGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,26:26:255,78,0	1/1:0,33:35:255,105,0
+chr21	27329320	chr21:27329320:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,49:49:255,144,0	1/1:0,41:41:255,121,0
+chr21	27330242	chr21:27330242:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:109,12,0	.	1/1:0,1:1:42,3,0
+chr21	27333318	chr21:27333318:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,30:53:255,255,255,255,0,255	1/1:0,31,1:32:255,94,0,255,76,255	1/2:0,26,21:47:255,255,252,255,0,255
+chr21	27335847	chr21:27335847:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:10:81,0,18	0/0:10,0:11:0,32,180	0/1:2,7:9:96,0,9
+chr21	27337467	chr21:27337467:M	TATATATATATATATATATATATA	<8>,<9>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,18,9:28:255,168,86,255,0,255	2/2:0,3,21:24:255,255,255,72,17,0	1/2:0,13,17:30:255,255,222,236,0,149
+chr21	27338345	chr21:27338345:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	.	1/2:0,2,3:5:139,47,33,32,0,17	1/1:0,3,0:5:114,15,0,82,14,72
+chr21	27348281	chr21:27348281:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:229,43,0	0/1:8,9:22:117,0,60	1/1:0,18:19:255,52,0
+chr21	27357584	chr21:27357584:M	AAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,108,0	0/1:22,22:46:255,0,255	1/1:0,32:33:255,99,0
+chr21	27364791	chr21:27364791:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:32:255,48,0	0/1:18,21:41:255,0,207	1/1:1,38:40:255,99,0
+chr21	27365015	chr21:27365015:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14,3:19:255,55,0,255,3,215	0/1:7,10,0:20:230,0,173,160,182,255	1/2:0,10,7:20:255,119,65,188,0,139
+chr21	27368218	chr21:27368218:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:86,9,0	0/1:1,0:5:5,0,32	1/1:0,4:5:128,15,0
+chr21	27369620	chr21:27369620:M	TTTTATTTTTATTTTATTTTATTTTATTTTATTTATTTTATTTTATTTTATTTTAT	<12.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,9:9:173,27,0	0/1:5,2:7:16,0,70	1/1:0,12:12:225,35,0
+chr21	27380980	chr21:27380980:M	TGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,28:35:255,92,0	0/1:16,7:24:134,0,255	1/1:0,27:32:255,95,0
+chr21	27380998	chr21:27380998:M	TATATATATATATATATATA	<12>	.	.	Motif=TA	GT:AD:DP:PL	0/0:24,0:27:0,80,255	0/0:20,0:21:0,63,255	0/1:18,12:33:177,0,255
+chr21	27384274	chr21:27384274:M	AAATAAAATAAAAT	<1.8>	.	.	Motif=AAATA	GT:AD:DP:PL	1/1:0,45:45:255,133,0	0/1:17,19:36:239,0,203	0/1:23,26:49:255,0,255
+chr21	27385910	chr21:27385910:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:44,8,0	0/1:2,1:3:8,0,24	1/1:0,9:9:153,26,0
+chr21	27388054	chr21:27388054:M	TATATATAGTATATAGTATATATAGTTATATAGTATTATTATATA	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:36,4:40:3,0,255	0/1:6,4:10:92,0,125	0/1:23,8:31:151,0,255
+chr21	27389584	chr21:27389584:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:83,0,102	0/1:5,2:8:11,0,73	1/1:0,12:13:222,38,0
+chr21	27393482	chr21:27393482:M	AAAAACAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAGAAGAAAAAGAAAAAAAAA	<76>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:49,9,0	1/1:0,1:2:16,3,0	0/0:2,0:2:0,6,32
+chr21	27400982	chr21:27400982:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,3,12	1/1:0,5:7:184,21,0	1/1:0,0:2:9,1,0
+chr21	27404660	chr21:27404660:M	ATACATACACACACACATACATAC	<5.5>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:47,0:47:0,141,255	0/1:16,17:33:255,0,255	0/1:26,19:45:255,0,255
+chr21	27405018	chr21:27405018:M	ACACACACACACACACACACACACACAC	<13>,<15>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,20,13,0:34:255,217,255,255,0,255,255,255,255,255	1/3:0,19,0,12:34:255,255,255,255,255,255,255,0,255,255	2/3:2,0,16,3:21:255,255,255,50,79,31,233,255,0,255
+chr21	27407722	chr21:27407722:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,28:29:255,84,0	1/1:1,30:31:255,67,0
+chr21	27407829	chr21:27407829:M	TATATATTATATAAAATATGTATATATAAATAATATATATTATACATAATATTATA	<29>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,11:11:215,33,0	1/1:0,3:3:55,9,0	1/1:0,12:12:228,35,0
+chr21	27411879	chr21:27411879:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,3:6:124,17,0	1/1:0,2:2:57,6,0
+chr21	27412866	chr21:27412866:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,102,0	0/1:18,14:35:255,0,255	0/1:21,23:46:255,0,255
+chr21	27419850	chr21:27419850:M	AAATAAATAAATAAATAAATAAATAAATAA	<6.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,39:40:255,118,0	1/1:0,35:35:255,103,0	1/1:0,33:33:255,97,0
+chr21	27421161	chr21:27421161:M	TTTTTTTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,18:20:255,41,0	0/1:2,7:10:92,0,22	0/1:2,7:9:99,0,9
+chr21	27421335	chr21:27421335:M	TTTTCTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,12:21:255,226,255,145,0,170	1/2:3,15,9:29:255,117,186,224,0,255	2/2:2,0,19:21:255,255,255,26,57,0
+chr21	27424968	chr21:27424968:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:120,0,150	0/1:3,9:13:209,0,44	0/1:2,5:10:124,0,34
+chr21	27425068	chr21:27425068:M	TTGTTATTGTTGTTGTTCGTTG	<8.3>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,21:22:255,55,0	0/1:16,15:32:174,0,194	1/1:0,24:25:255,73,0
+chr21	27425091	chr21:27425091:M	TTTCTTTCTTTCCTCTTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCTTTCTT	<4.2>,<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/2:6,0,8:14:55,73,208,0,135,113	0/0:12,0,2:15:0,36,255,18,255,255	0/1:5,8,4:22:161,0,88,140,76,241
+chr21	27425193	chr21:27425193:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTCTTTTCTTTTCTTT	<33.8>	.	.	Motif=CTTT	GT:AD:DP:PL	1/1:0,8:8:95,22,0	1/1:0,2:7:23,5,0	1/1:0,4:7:47,11,0
+chr21	27426776	chr21:27426776:M	GTGTGTGTGTGTGTGTGTGTGT	<12>,<14>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,19,0:36:255,0,218,255,255,255	0/2:24,0,24:50:255,255,255,0,255,255	0/1:22,14,0:36:154,0,255,255,255,255
+chr21	27429363	chr21:27429363:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,9:25:109,0,142	0/1:15,24:44:255,0,111	1/1:1,35:43:255,107,0
+chr21	27431644	chr21:27431644:M	AAAAAAAAAAAAAAAAA	<11>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,7:23:62,129,255,0,255,220	1/2:3,23,5:31:255,35,94,255,0,255	0/0:24,0,1:27:0,80,255,61,255,255
+chr21	27431810	chr21:27431810:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:12:1,0,134	0/0:28,1:29:0,68,255	0/1:7,8:16:103,0,77
+chr21	27444341	chr21:27444341:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:21:104,0,150	0/0:16,0:16:0,47,255	1/1:2,15:17:234,14,0
+chr21	27445915	chr21:27445915:M	TAGATGGATACATAGGTAGACACATAGATAGATACATAGATA	<11.5>,<12.5>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:1,13,2:16:228,29,0,183,12,200	1/1:1,17,0:18:255,36,0,255,52,255	2/2:0,0,15:15:255,255,255,45,44,0
+chr21	27447655	chr21:27447655:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,22,9,0:35:255,255,196,255,0,255,255,174,255,255	2/3:0,0,5,6:11:255,255,255,100,100,68,83,83,0,51	1/3:0,12,0,5:17:255,135,99,255,85,255,255,0,255,255
+chr21	27451701	chr21:27451701:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,29:33:255,57,0	1/1:0,33:34:255,97,0	1/1:2,33:37:255,72,0
+chr21	27457671	chr21:27457671:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1,0:20:0,40,255,59,255,255	0/1:19,22,0:41:255,0,216,255,255,255	0/2:22,0,13:36:142,241,255,0,255,255
+chr21	27459419	chr21:27459419:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:34:255,82,0	0/1:13,20:35:255,0,122	1/1:2,37:41:255,84,0
+chr21	27462244	chr21:27462244:M	ACACACACACACACACACACAC	<10.5>,<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:3,0,24:30:255,255,255,0,41,1	0/2:15,0,11:27:225,255,255,0,181,255	1/2:1,27,13:44:255,255,255,255,0,255
+chr21	27463499	chr21:27463499:M	ACACACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:19:255,54,0	0/1:18,22:40:255,0,255	0/1:19,16:36:255,0,255
+chr21	27465654	chr21:27465654:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:24:0,69,255	0/0:17,0:19:0,54,255	0/1:13,8:25:148,0,255
+chr21	27466676	chr21:27466676:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,48:48:255,142,0	0/1:26,29:55:255,0,255	1/1:0,49:49:255,144,0
+chr21	27471190	chr21:27471190:M	AAAAAAAATACAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5,0:16:47,0,163,81,207,255	0/1:10,12,0:22:150,0,115,180,177,255	0/2:7,0,7:14:157,127,218,0,127,160
+chr21	27473868	chr21:27473868:M	CACACAGACACACACACACACACACACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:27,0:27:0,79,255	0/1:14,15:31:187,0,187
+chr21	27480671	chr21:27480671:M	ACACCACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39:40:255,109,0	0/1:8,15:23:192,0,71	0/1:16,16:33:191,0,192
+chr21	27486540	chr21:27486540:M	ATATACATACATATATATATGTATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/0:27,0:27:0,81,255	0/1:8,15:24:255,0,151
+chr21	27488619	chr21:27488619:M	TTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,2:7:176,34,14,85,0,66	0/2:4,0,3:8:63,49,148,0,110,104	1/1:0,3,0:3:83,9,0,59,9,51
+chr21	27492969	chr21:27492969:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/0:31,0:31:0,93,255	0/1:15,7:23:136,0,255
+chr21	27496900	chr21:27496900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,10:21:110,0,127	0/0:12,0:12:0,35,197	0/1:9,9:19:104,0,97
+chr21	27501207	chr21:27501207:M	TTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:21:47,0,255	0/1:15,5:20:59,0,255	0/1:20,6:28:84,0,255
+chr21	27501555	chr21:27501555:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,38:40:255,81,0	1/1:0,38:39:255,114,0	0/1:26,14:40:138,0,255
+chr21	27503971	chr21:27503971:M	ACACACACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:2,10,4,0:16:255,34,97,234,0,255,255,126,255,255	2/3:0,0,9,4:13:232,255,255,105,106,75,147,237,0,218	1/2:2,12,7,0:22:255,85,170,255,0,255,255,204,255,255
+chr21	27509416	chr21:27509416:M	ACACACACACACACACACACACACACACACACACACAC	<18>,<21>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,11:25:255,255,255,250,0,255	1/1:1,20,0:24:255,30,0,255,48,255	0/2:11,0,9:21:199,238,255,0,193,252
+chr21	27514789	chr21:27514789:M	ACACACACACACACACATACACAC	<11>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,19:38:255,0,254	0/0:37,2:39:0,78,255	0/1:21,25:46:255,0,255
+chr21	27522644	chr21:27522644:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7:8:215,22,0	.	1/1:0,0:3:4,2,0
+chr21	27523022	chr21:27523022:M	AATAATAATAATAATAATAATA	<8.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:20,13:33:154,0,255	0/1:17,12:30:130,0,230	0/0:22,0:23:0,67,255
+chr21	27529516	chr21:27529516:M	TTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:170,21,0	0/1:3,11:14:255,0,39	.
+chr21	27531879	chr21:27531879:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:4:0,9,70	0/1:3,1:7:37,0,51	0/1:3,3:7:53,0,51
+chr21	27540985	chr21:27540985:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,110,0	1/1:0,47:47:255,138,0	0/1:25,17:42:196,0,255
+chr21	27541214	chr21:27541214:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:41,0,6	0/1:6,3:9:24,0,75	0/1:6,2:9:9,0,88
+chr21	27552656	chr21:27552656:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:1,25:27:255,61,0	0/1:20,13:34:135,0,255
+chr21	27558016	chr21:27558016:M	ACACACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,5:25:33,0,255	0/1:11,16:27:208,0,116	0/0:31,1:33:0,66,255
+chr21	27559114	chr21:27559114:M	TTTTATTCTATTTTATTTTATTTTATTTTATTTTAT	<4.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:16,27:43:255,0,255	0/0:33,0:33:0,99,255	0/1:8,22:30:255,0,131
+chr21	27561187	chr21:27561187:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:9:9,0,97	0/1:6,3:11:31,0,73	0/0:19,1:22:0,46,255
+chr21	27567038	chr21:27567038:M	ATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:51,1:52:0,135,255	0/1:14,10:24:109,0,181	0/0:35,2:37:0,72,255
+chr21	27587785	chr21:27587785:M	TATATATATTATATTATGTGACATATATTTTATATATATTATATATATATA	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:19,4:24:53,0,255	0/1:4,1:5:10,0,84	0/1:5,3:8:52,0,100
+chr21	27590230	chr21:27590230:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:37:255,0,163	1/1:4,37:42:255,52,0	0/1:13,17:30:224,0,150
+chr21	27594389	chr21:27594389:M	TGGTTGGTTGGTTGGTTG	<5.5>	.	.	Motif=TGGT	GT:AD:DP:PL	0/1:23,12:35:130,0,255	1/1:0,47:47:255,138,0	0/0:39,0:39:0,115,255
+chr21	27606894	chr21:27606894:M	TTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTTGT	<16>,<17.7>,<19.3>	.	.	Motif=TTG	GT:AD:DP:PL	1/3:0,11,0,9:20:255,250,217,255,250,255,255,0,255,255	1/1:0,17,0,0:17:255,51,0,255,51,255,255,51,255,255	2/3:0,0,8,10:18:255,255,255,255,255,253,225,225,0,195
+chr21	27607235	chr21:27607235:M	TCTTTTTCTTTTTTTTTT	<3.2>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/1:23,17:40:230,0,255	1/1:2,44:46:255,96,0	0/0:35,0:35:0,104,255
+chr21	27608798	chr21:27608798:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,9,0,10:19:255,255,241,255,182,255,242,0,163,209	2/3:0,2,12,11:25:255,255,255,193,157,121,226,143,0,158	1/1:0,20,0,0:23:255,65,0,255,65,255,255,66,255,255
+chr21	27610328	chr21:27610328:M	TTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,6:22:255,158,110,255,0,255	1/2:0,2,10:16:255,255,255,58,0,17	1/1:1,24,0:32:255,48,0,255,89,255
+chr21	27627474	chr21:27627474:M	ATATATATATCTTTATATATATATATATATATAT	<16>,<23>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,4:15:245,101,69,169,0,255	1/1:0,3,0:3:49,9,0,57,9,86	1/2:0,5,3:8:146,77,62,83,0,149
+chr21	27628596	chr21:27628596:M	TATACATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,17,16:34:255,255,213,255,0,232	1/2:0,10,21:31:255,255,255,181,0,90	1/2:0,12,17:29:255,255,236,224,0,140
+chr21	27629606	chr21:27629606:M	AAAATAAATAAATAAATAAATAATAAAAATAAGAATAAAAATAAAAAT	<8.7>	.	.	Motif=AAAATA	GT:AD:DP:PL	0/1:12,5:17:122,0,255	0/1:4,7:11:209,0,70	0/1:13,9:22:242,0,255
+chr21	27647985	chr21:27647985:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<6.8>,<8.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,10,15:25:255,255,255,255,0,255	1/2:0,14,17:32:255,255,255,255,0,255	1/2:0,24,14:38:255,255,255,255,0,255
+chr21	27655297	chr21:27655297:M	TTCTTTTTTCTTTTTTCTTTTCTTTTCTTCTTCTTTTTTTTTTTT	<8>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:9,8:17:103,0,122	0/1:9,11:20:138,0,103	0/1:12,13:25:168,0,150
+chr21	27663587	chr21:27663587:M	AAACAAACAAAC	<3.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:37,13:52:206,0,255	0/1:22,25:49:255,0,255	0/1:15,18:33:255,0,255
+chr21	27665678	chr21:27665678:M	TTTTTTTTTTTATTTTGTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:152,0,170	0/1:20,16:36:178,0,248	0/1:19,16:36:188,0,252
+chr21	27676113	chr21:27676113:M	AAAAAAAAAAATAAAATAAAATAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,21:32:255,0,85	0/1:5,14:21:197,0,37	0/1:7,13:20:180,0,69
+chr21	27688423	chr21:27688423:M	TCTCCCTCTCTCTCTCTCTCTCT	<10.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,14:30:180,0,218	0/1:18,10:28:98,0,242	0/1:17,10:27:107,0,238
+chr21	27694000	chr21:27694000:M	AAAATAAAAATAAA	<2.5>	.	.	Motif=AAAATA	GT:AD:DP:PL	0/1:18,16:34:255,0,255	0/0:38,0:38:0,114,255	0/1:27,25:52:255,0,255
+chr21	27695616	chr21:27695616:M	TCTCTTTCTCTT	<1.3>	.	.	Motif=TCTCTT	GT:AD:DP:PL	0/1:15,21:36:255,0,255	0/1:13,19:32:255,0,255	0/1:9,17:27:255,0,174
+chr21	27714523	chr21:27714523:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,7:24:6,0,101	0/0:9,1:10:0,16,75	0/0:15,1:17:0,34,142
+chr21	27714551	chr21:27714551:M	TATATATATATATATATATA	<11>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:2,19,8:29:255,67,12,143,0,156	1/2:3,11,7:21:181,44,21,62,0,96	1/2:1,14,7:22:235,67,19,110,0,107
+chr21	27714655	chr21:27714655:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,13:16:255,39,0	1/1:0,17:20:255,51,0	1/1:0,16:21:255,19,0
+chr21	27741987	chr21:27741987:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,28:30:255,70,0	1/1:1,33:34:255,82,0
+chr21	27761385	chr21:27761385:M	AAAGAAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<16.8>,<20.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/2:0,9,3:13:255,75,48,235,0,229	2/2:0,0,5:5:140,142,144,15,15,0	1/2:0,8,1:9:231,25,1,209,0,209
+chr21	27769825	chr21:27769825:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,10:12:255,210,183,33,32,0	1/2:0,4,10:14:255,163,123,66,0,25	1/2:0,2,8:10:255,134,106,34,0,4
+chr21	27772078	chr21:27772078:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:40:255,112,0	1/1:0,33:33:255,97,0	1/1:0,31:32:255,91,0
+chr21	27781493	chr21:27781493:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,20:45:246,0,255	0/1:30,20:50:209,0,255	0/0:40,1:41:0,102,255
+chr21	27782690	chr21:27782690:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,23:47:255,255,255,255,0,255	2/2:0,2,34:40:255,255,255,113,81,0	1/2:1,25,16:44:255,255,186,255,0,255
+chr21	27784992	chr21:27784992:M	ACACACACACACACACACACACACACACACACACAAACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,20:22:255,64,0	0/1:14,13:29:157,0,156	1/1:0,29:30:255,88,0
+chr21	27786346	chr21:27786346:M	TGTGTGCGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,28:28:255,82,0	1/1:0,43:43:255,127,0
+chr21	27793653	chr21:27793653:M	TATATATATATATATATATATATATATATATAT	<12.5>,<13.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,13,12:26:255,255,255,215,224,152,230,197,0,158	1/2:0,4,2,0:7:179,34,14,79,0,61,154,29,78,145	1/3:0,8,0,7:16:255,187,173,255,130,228,214,0,138,188
+chr21	27797322	chr21:27797322:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>,<21.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,11,0:20:255,192,134,158,0,99,255,191,158,255	1/3:0,9,0,5:15:255,149,121,255,133,251,255,0,147,237	2/3:0,0,8,6:14:255,255,255,160,159,132,211,135,0,189
+chr21	27801363	chr21:27801363:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/0:37,0:37:0,108,255	0/1:12,13:26:159,0,141
+chr21	27804074	chr21:27804074:M	TTATTTATTTATTTATTTATTTATTTATTTATTTA	<7.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:11,23:34:255,0,112	0/1:16,18:34:227,0,191	0/0:30,0:30:0,89,255
+chr21	27804852	chr21:27804852:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,34:34:255,100,0	1/1:0,39:40:255,118,0
+chr21	27810529	chr21:27810529:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,21,0:22:255,64,0,255,64,255	0/1:9,11,0:21:255,0,185,255,229,255	1/2:0,5,6:12:255,162,147,127,0,111
+chr21	27811041	chr21:27811041:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:11,14:25:170,0,118	0/0:37,3:41:0,67,255
+chr21	27811592	chr21:27811592:M	CACACACACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/0:43,0:44:0,130,255	0/1:19,30:50:255,0,214	0/1:18,21:39:255,0,222
+chr21	27815912	chr21:27815912:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:29:0,83,255	0/1:16,12:29:121,0,199	0/0:35,0:37:0,108,255
+chr21	27817799	chr21:27817799:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19,3:22:255,57,0,255,10,255	1/2:0,8,9:17:255,130,106,137,0,89	1/1:0,27,1:29:255,84,0,255,67,255
+chr21	27820032	chr21:27820032:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTACTTACTTATTT	<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:0,10:13:204,35,0	1/1:0,14:14:255,41,0
+chr21	27824230	chr21:27824230:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:12:208,35,0	1/1:0,11:13:210,38,0	1/1:0,15:15:255,44,0
+chr21	27827116	chr21:27827116:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:31:0,90,255	0/0:20,0:22:0,65,255	0/1:16,13:32:255,0,255
+chr21	27829055	chr21:27829055:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,72,255	0/0:30,0:33:0,95,255	0/1:18,7:27:107,0,255
+chr21	27836791	chr21:27836791:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,30	0/1:1,1:5:43,0,18	1/1:0,4:4:116,12,0
+chr21	27837650	chr21:27837650:M	AAAAAAAAAAAAAGAAAAGAAAAGAAAACAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:21,0,133	0/1:9,10:20:117,0,110	1/1:1,20:21:255,44,0
+chr21	27849622	chr21:27849622:M	TTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,15,128	0/0:9,0:12:0,33,255	1/1:0,18:20:255,28,0
+chr21	27851002	chr21:27851002:M	TTTTTTTTTTTTT	<11>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:21,1,14:37:172,212,255,0,255,255	0/2:18,3,22:43:255,255,255,0,255,196	1/2:0,21,26:47:255,255,255,255,0,255
+chr21	27854747	chr21:27854747:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,2:24:0,24,255	0/1:19,4:24:0,0,255	0/1:13,14:29:185,0,151
+chr21	27859465	chr21:27859465:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:6:55,0,0	0/1:1,0:3:13,0,8	0/0:6,0:6:0,18,101
+chr21	27863795	chr21:27863795:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,22:44:255,0,255	0/1:20,29:49:255,0,213	0/1:23,23:46:255,0,255
+chr21	27866101	chr21:27866101:M	CACACACACATGCACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,32:32:255,94,0	1/1:0,37:37:255,109,0
+chr21	27873205	chr21:27873205:M	CCCCCCCCCCC	<10>,<12>	.	.	Motif=C	GT:AD:DP:PL	0/1:12,13,0:25:167,0,149,237,188,255	0/1:18,13,0:31:137,0,224,224,255,255	0/2:10,1,11:22:133,176,255,0,134,127
+chr21	27879186	chr21:27879186:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/0:38,0:38:0,114,255	0/1:20,22:43:255,0,255
+chr21	27881675	chr21:27881675:M	TTTTTTTTTTTTCTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,14,0:31:174,0,231,255,255,255	0/0:22,0,0:22:0,65,255,65,255,255	1/2:0,13,17:30:255,255,255,235,0,255
+chr21	27888391	chr21:27888391:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:18:47,0,255	0/1:10,1:15:32,0,254	0/1:9,7:18:173,0,215
+chr21	27894287	chr21:27894287:M	GTGTGTGTGTGTGTGTGTGT	<12>,<13>	.	.	Motif=GT	GT:AD:DP:PL	0/1:21,14,1:36:255,0,255,241,255,255	0/2:13,1,13:27:255,211,255,0,255,255	1/2:0,22,15:37:255,255,167,255,0,255
+chr21	27902942	chr21:27902942:M	AAAAAAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5,0:9:159,0,52,146,66,199	0/1:1,3,0:7:75,0,61,60,37,98	1/2:1,3,3:9:137,43,80,36,0,57
+chr21	27903765	chr21:27903765:M	ATATATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,18:39:225,0,141	0/1:15,22:39:245,0,116	1/1:0,45:45:255,130,0
+chr21	27904539	chr21:27904539:M	GAGGGAGGGAGGGA	<4.5>	.	.	Motif=GAGG	GT:AD:DP:PL	0/1:23,16:39:78,0,159	0/0:20,6:26:0,2,158	0/1:35,16:51:45,0,255
+chr21	27908706	chr21:27908706:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:122,21,0	0/1:4,7:14:92,0,33	0/0:0,0:2:0,0,1
+chr21	27910087	chr21:27910087:M	TAGTAGTAGTAGTAGTA	<6.7>	.	.	Motif=TAG	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:37,0:37:0,109,255	0/1:25,13:38:134,0,255
+chr21	27911651	chr21:27911651:M	AAAAAAACAAAAAACAAAACAAAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:31,0:33:0,96,255	0/1:21,9:30:76,0,255
+chr21	27920809	chr21:27920809:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,3,30	0/1:1,0:2:10,0,21	0/1:5,3:10:55,0,132
+chr21	27932757	chr21:27932757:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2,0:4:48,0,20,35,17,44	1/1:0,3,0:5:98,12,0,72,12,63	1/2:0,2,6:9:147,85,76,44,0,20
+chr21	27940508	chr21:27940508:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,3:7:68,0,78	1/1:0,9:11:255,32,0	0/0:16,0:17:0,51,255
+chr21	27943150	chr21:27943150:M	ATTATTATTATTATTATT	<8>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,17:40:255,0,255	0/0:37,0:40:0,119,255	0/1:19,12:35:183,0,255
+chr21	27945556	chr21:27945556:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,4:7:63,0,16	0/1:1,3:5:48,0,3	0/1:7,5:13:50,0,95
+chr21	27946687	chr21:27946687:M	TTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:25:255,75,0	1/1:0,23:26:255,78,0	0/1:3,12:17:255,0,63
+chr21	27948655	chr21:27948655:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:8:127,15,0	1/1:0,5:7:152,18,0	0/1:4,1:6:13,0,97
+chr21	27948988	chr21:27948988:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:9:197,24,0	1/1:0,13:13:255,39,0	0/1:13,2:19:11,0,255
+chr21	27951397	chr21:27951397:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:16:174,6,0	0/1:5,6:11:71,0,53	0/0:18,1:19:0,38,255
+chr21	27955149	chr21:27955149:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,5:18:89,0,255	0/1:7,6:16:125,0,168	0/0:12,0:14:0,31,255
+chr21	27958196	chr21:27958196:M	ACACACACACACACACACACACACACACACACACAC	<24>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,5:17:89,0,255	0/1:12,5:22:86,0,255	0/1:17,4:25:66,0,255
+chr21	27963693	chr21:27963693:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:24:203,0,255	0/1:9,15:29:255,0,172	0/1:9,13:22:255,0,179
+chr21	27966629	chr21:27966629:M	CACACACACACACACACACACACACACGCACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,14:24:190,0,117	0/1:20,16:36:177,0,248	0/1:14,16:30:203,0,168
+chr21	27970738	chr21:27970738:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,16:30:204,0,151	0/1:8,10:19:116,0,93	0/1:13,9:23:93,0,172
+chr21	27977886	chr21:27977886:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:57,0,3	0/0:6,1:7:0,3,85	0/1:1,6:10:87,0,11
+chr21	28000880	chr21:28000880:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,64,0	1/1:0,7:10:140,26,0	1/1:1,13:14:211,23,0
+chr21	28007950	chr21:28007950:M	TTGTTGTTGTTTGTTTGTTTTTGTTGTTGTTGTTATTGTTG	<14>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:29,12:46:0,15,114	0/1:25,14:40:3,0,74	0/0:27,9:38:0,19,109
+chr21	28009794	chr21:28009794:M	CACACACACACACACACATTCTAGATACCCACACACATACACACATAAACACACACACACACACACACACACACA	<33.5>,<36.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:3,11,6:20:255,45,149,230,0,249	0/1:5,2,2:10:29,0,139,11,34,61	0/1:4,7,2:13:157,0,99,144,30,186
+chr21	28009932	chr21:28009932:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTGTGT	<25>	.	.	Motif=TG	GT:AD:DP:PL	0/0:15,0:18:0,43,213	0/1:7,12:20:112,0,43	0/0:15,0:15:0,43,210
+chr21	28020603	chr21:28020603:M	AGAGAGAGAGAGA	<8.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:21,14:35:255,0,255	0/1:17,17:35:255,0,255	0/1:17,9:26:215,0,255
+chr21	28027198	chr21:28027198:M	TTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:26:175,0,255	0/1:17,7:29:143,0,255	0/1:12,4:20:76,0,255
+chr21	28034621	chr21:28034621:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,13:28:160,0,198	0/1:20,10:32:93,0,255	0/1:21,19:40:228,0,255
+chr21	28051047	chr21:28051047:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:12:95,0,48	1/1:1,13:15:220,26,0	0/0:16,0:17:0,50,255
+chr21	28051175	chr21:28051175:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATATAAAATATATATATA	<19.5>,<25.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,6:9:231,231,231,26,26,0	2/2:0,0,1:3:59,59,59,9,9,0	1/1:0,3,0:3:94,9,0,94,9,94
+chr21	28053599	chr21:28053599:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<22>,<24>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,16,0:32:255,0,255,255,255,255	1/2:0,8,6:18:255,164,128,225,0,198	0/1:13,4,0:20:78,0,255,119,255,255
+chr21	28055573	chr21:28055573:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<13>,<15>	.	.	Motif=GT	GT:AD:DP:PL	0/3:14,0,0,13:27:167,244,255,243,255,255,0,255,225,186	2/3:1,0,17,9:27:255,255,255,142,246,189,255,255,0,255	0/1:12,17,0,1:30:255,0,255,255,226,255,255,200,255,255
+chr21	28056344	chr21:28056344:M	AAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,16,1:30:255,0,248,255,255,255	1/1:0,23,0:25:255,74,0,255,73,255	0/2:18,1,21:40:255,255,255,0,255,255
+chr21	28058283	chr21:28058283:M	TGTTTTTTTTTGTTTGTTTGTTTGTTT	<7>	.	.	Motif=TGTT	GT:AD:DP:PL	0/1:13,15:28:255,0,214	1/1:1,33:34:255,79,0	0/1:14,11:25:177,0,248
+chr21	28064292	chr21:28064292:M	AAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,3:22:24,73,255,0,255,255	2/2:0,0,11:13:255,255,255,38,36,0	0/1:7,9,0:18:206,0,160,233,193,255
+chr21	28066426	chr21:28066426:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,2:39:0,78,255	0/0:29,0:31:0,90,255	0/1:26,15:44:170,0,255
+chr21	28066490	chr21:28066490:M	AAAAAAAAAAGAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,25:41:255,0,186	1/1:0,33:33:255,97,0	0/1:25,16:41:181,0,255
+chr21	28071269	chr21:28071269:M	AAATAAATAAATAAATAAATAAATAAATA	<8.2>,<9.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,24,0:24:255,71,0,255,71,255	1/1:0,20,0:20:255,59,0,255,59,255	1/2:0,15,7:23:255,131,68,241,0,220
+chr21	28077985	chr21:28077985:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,3:44:0,73,255	0/1:24,26:52:255,0,255	0/0:37,4:43:0,53,255
+chr21	28079036	chr21:28079036:M	CACACACACACACACACACACACACACACACACACACACACACACACACAGACGCACATACACACA	<26>,<28>,<30>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,3,5:8:255,249,244,146,146,132,95,90,0,75	1/2:0,6,10,0:16:255,255,255,172,0,134,255,255,172,255	3/3:0,0,0,10:11:255,255,255,255,255,255,33,33,30,0
+chr21	28081085	chr21:28081085:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:17:0,31,255	0/1:11,6:18:51,0,147	0/0:18,3:24:0,16,255
+chr21	28094804	chr21:28094804:M	AGATAGATAGATAGATAGATAGATAGACAGACAGACAGACAGACAGATAGAT	<13.2>	.	.	Motif=AGAT	GT:AD:DP:PL	1/1:0,16:16:146,40,0	1/1:0,21:22:191,52,0	1/1:0,22:22:201,55,0
+chr21	28098537	chr21:28098537:M	TTTATTTATTTAATTTTTTTAATTTA	<5.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:37,0:39:0,109,255	0/1:15,13:32:165,0,201	0/0:29,0:32:0,85,255
+chr21	28101323	chr21:28101323:M	AATATTAATATTA	<2.7>	.	.	Motif=AATATT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:5,5:10:109,0,111	0/0:28,0:28:0,84,255
+chr21	28106215	chr21:28106215:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,17:36:212,0,249	0/0:16,0:16:0,47,255	0/1:30,28:58:255,0,255
+chr21	28106678	chr21:28106678:M	TTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:23,12:37:237,0,255	0/0:41,0:41:0,123,255
+chr21	28114773	chr21:28114773:M	TATATATATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,22:38:255,0,255	0/0:25,0:27:0,75,255	0/1:12,25:39:255,0,210
+chr21	28114796	chr21:28114796:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:40,0:40:0,119,255	0/1:20,10:32:132,0,255	0/0:49,0:49:0,146,255
+chr21	28120501	chr21:28120501:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:35:255,83,0	1/1:1,21:24:255,53,0	1/1:1,26:29:255,67,0
+chr21	28129676	chr21:28129676:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,23,13:37:255,225,139,255,0,255	1/1:1,31,0:32:255,76,0,255,94,255	1/2:1,19,21:42:255,255,255,255,0,241
+chr21	28132778	chr21:28132778:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:35:255,66,0	1/1:4,34:39:255,44,0	1/1:3,33:38:255,57,0
+chr21	28134457	chr21:28134457:M	GAATGAATGAATGAATGAATGAATGAATGAATGA	<7.5>,<10.5>	.	.	Motif=GAAT	GT:AD:DP:PL	0/2:21,0,17:38:255,255,255,0,255,255	0/1:13,16,0:29:208,0,153,255,236,255	0/2:15,0,9:24:190,236,255,0,255,255
+chr21	28136091	chr21:28136091:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,8,15:23:255,255,255,249,0,193	1/2:0,11,7:19:255,207,164,255,0,255	1/2:0,8,6:15:255,188,153,241,0,211
+chr21	28141738	chr21:28141738:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:4,8:12:184,0,74	0/0:25,0:25:0,75,255
+chr21	28142238	chr21:28142238:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:49:0,144,255	0/1:17,13:31:150,0,211	0/0:50,2:53:0,119,255
+chr21	28147674	chr21:28147674:M	ACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,5:17:92,0,223	0/0:10,0:10:0,30,255	0/1:3,4:8:97,0,56
+chr21	28149925	chr21:28149925:M	CGCGCGCGCGCGCG	<4>,<5>	.	.	Motif=CG	GT:AD:DP:PL	2/2:0,0,1:1:20,13,10,3,3,0	0/0:15,0,0:15:0,45,255,44,255,255	1/2:1,3,4:8:120,25,25,16,0,11
+chr21	28149938	chr21:28149938:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17.5>,<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,8,0:19:255,95,38,128,0,72,255,71,122,255	0/2:15,1,5,0:24:85,43,255,0,255,255,64,255,255,255	1/3:0,9,2,7:18:255,150,102,160,56,107,189,0,77,144
+chr21	28168360	chr21:28168360:M	TAAAATAAAAGGTATAATCAAATAAAAGAATAATAAAATAAAA	<8>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:13,8:21:146,0,255	0/0:27,0:27:0,81,255	0/1:20,18:38:255,0,255
+chr21	28168793	chr21:28168793:M	GTGTGTGTGTGGGTGTGTATGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,15:27:208,0,149	0/0:31,1:32:0,76,255	0/1:13,20:34:255,0,142
+chr21	28169645	chr21:28169645:M	AATTAATTAATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:13,16:29:223,0,166	0/0:30,0:30:0,88,255	0/1:17,16:33:203,0,223
+chr21	28173037	chr21:28173037:M	TATATATATATATATATATATATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	.	0/0:5,0:5:0,15,88	1/1:1,23:24:255,53,0
+chr21	28177833	chr21:28177833:M	AAAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:8,17:28:255,0,136	1/1:0,21:21:255,63,0
+chr21	28177937	chr21:28177937:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,37:43:255,91,0	0/1:12,8:22:80,0,124	0/1:21,25:47:255,0,209
+chr21	28179995	chr21:28179995:M	TATATATATACATATATAT	<11.5>,<12.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,20,13,0:33:255,140,43,201,0,112,255,141,209,255	0/2:19,0,16,0:35:255,153,255,0,255,255,255,255,255,255	1/3:0,8,0,3:12:195,66,43,142,64,127,147,0,86,194
+chr21	28180018	chr21:28180018:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<10>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:15,10:28:168,0,255	0/1:23,5:32:48,0,255	0/1:7,4:15:64,0,135
+chr21	28186676	chr21:28186676:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:89,9,0	0/0:8,0:9:0,14,234	0/1:2,1:5:16,0,70
+chr21	28188143	chr21:28188143:M	GAGAGAAAGACAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:17,24:41:255,0,187	0/1:25,19:44:226,0,255
+chr21	28194002	chr21:28194002:M	AAAAAAAAGAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,34:34:255,255,255,102,101,0	0/2:9,2,13:27:255,216,255,0,145,212	1/2:0,17,17:34:255,255,215,255,0,214
+chr21	28194845	chr21:28194845:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:80,9,0	.	1/1:0,1:1:26,3,0
+chr21	28205871	chr21:28205871:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:156,18,0	0/1:1,4:6:107,0,10	0/0:0,0:3:0,1,2
+chr21	28206704	chr21:28206704:M	TCTTTTGCTTTTTCTTTTCTTTTTTTTTTTTTTCTTTTTTTTT	<6.8>	.	.	Motif=TCTTTT	GT:AD:DP:PL	1/1:0,14:15:255,42,0	0/1:3,11:15:236,0,39	1/1:0,18:18:255,54,0
+chr21	28216326	chr21:28216326:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:24:0,42,255	0/0:27,1:30:0,70,255	0/1:11,15:27:189,0,126
+chr21	28225063	chr21:28225063:M	AAAGAAAAAGAAAGAAAGAGAAAAA	<2.5>	.	.	Motif=AAAGAA	GT:AD:DP:PL	0/1:32,14:46:131,0,255	0/1:40,9:49:26,0,255	0/1:17,8:37:96,0,255
+chr21	28234141	chr21:28234141:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,30,0:33:255,59,0,255,92,255	1/1:1,30,2:33:255,79,0,255,62,255	1/2:2,13,7:24:255,89,71,151,0,188
+chr21	28237991	chr21:28237991:M	CACACACACACACACACACACACACACACAC	<17.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,11:22:255,195,133,194,0,132	0/2:22,0,4:26:38,67,255,0,255,255	1/2:0,12,16:29:255,255,196,208,0,137
+chr21	28256095	chr21:28256095:M	ATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAA	<8.2>,<9.2>	.	.	Motif=ATATA	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,3,0:5:76,0,9,48,0,40	1/2:0,4,6:10:255,112,84,75,0,46
+chr21	28264840	chr21:28264840:M	AAAAAAAAAAAAGATAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0:28:0,83,255	0/0:29,0:32:0,92,255	0/1:22,9:32:146,0,255
+chr21	28264967	chr21:28264967:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/0:21,0:26:0,71,255	0/1:13,10:25:193,0,255
+chr21	28265082	chr21:28265082:M	AAAAACAAAAACAAAAAC	<5>	.	.	Motif=AAAAAC	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:22,0:22:0,66,255	0/1:13,10:23:195,0,255
+chr21	28266771	chr21:28266771:M	TTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTATTCTTTTTTTTTTTTTTTTT	<53>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:102,18,0	0/1:2,7:10:95,0,4	0/1:6,5:11:51,0,68
+chr21	28267754	chr21:28267754:M	TTTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,12:14:210,245,255,23,41,0	0/2:2,0,11:14:148,185,255,0,35,4	1/2:0,10,4:18:255,67,65,255,0,255
+chr21	28284744	chr21:28284744:M	ACACACACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,48:49:255,147,0	1/1:0,26:27:255,81,0
+chr21	28288702	chr21:28288702:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,2:8:12,0,73	0/1:3,3:7:40,0,30	0/0:10,0:10:0,29,172
+chr21	28292366	chr21:28292366:M	GAGAGAGAGAGAGAGAGAGAGA	<13>,<14>	.	.	Motif=GA	GT:AD:DP:PL	2/2:0,2,30:32:255,255,255,95,57,0	2/2:0,4,47:51:255,255,255,152,79,0	1/2:0,18,14:32:255,253,161,255,0,234
+chr21	28300160	chr21:28300160:M	ATTTATTTATTTATTTATTTATGTATTTATTTATTTATTTATTT	<10>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,12:12:220,35,0	0/1:12,16:28:220,0,144
+chr21	28309061	chr21:28309061:M	ATATATATGTGTATATATATATATATGCATATAAATATATATAT	<39>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:8:190,21,0	1/1:0,3:3:81,9,0	0/0:15,1:16:0,21,255
+chr21	28312992	chr21:28312992:M	AAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAA	<25>,<26>,<33>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,2,0:9:234,34,8,112,0,89,234,34,112,234	1/1:0,20,1,0:24:255,71,0,255,53,255,255,71,255,255	2/3:2,0,5,5:15:175,124,222,40,145,137,114,84,0,137
+chr21	28314045	chr21:28314045:M	AAAAGAAAAAAAAAAAACAAAAAAACAAAAAAAAA	<36>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28,1:30:255,70,0,255,70,255	1/2:0,12,4:16:255,68,22,173,0,161	1/1:0,21,0:21:255,62,0,255,62,255
+chr21	28314789	chr21:28314789:M	ATATATATATATATATATA	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:42,0:46:0,135,255	0/0:16,0:17:0,51,255	0/1:25,14:40:255,0,255
+chr21	28314875	chr21:28314875:M	TATATATAGATATATATATATATGTGTGTATATATATATATAT	<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,17:17:255,50,0	1/1:0,17:17:255,50,0
+chr21	28319699	chr21:28319699:M	ATAATATAATATATTATATATATATATATAAAATATAATATAAT	<9.6>,<10>	.	.	Motif=ATAAT	GT:AD:DP:PL	1/2:0,7,5:12:255,127,105,179,0,162	2/2:0,0,1:1:28,28,28,3,3,0	2/2:0,0,1:3:27,27,27,2,2,0
+chr21	28324507	chr21:28324507:M	CACACACACACACACACACACACACACACA	<18>,<19>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,11:18:255,196,145,124,0,73	1/2:0,15,9:25:255,153,81,255,0,195	0/2:17,2,10:31:224,138,255,0,255,255
+chr21	28330674	chr21:28330674:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16,0:19:255,38,0,255,53,255	1/1:2,15,0:19:237,22,0,255,50,255	1/2:1,6,5:13:146,68,100,95,0,146
+chr21	28334329	chr21:28334329:M	TATATAAATACATATACATATATATATGTACATTTATATATATATATATACACATTTTTATATATATACATATATATA	<40>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:10:189,30,0	.	0/0:2,0:2:0,6,37
+chr21	28336739	chr21:28336739:M	TATATATATATATATATATATATATATATAT	<21.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,3:7:197,47,26,63,0,42	.	2/2:0,0,2:4:63,37,31,6,6,0
+chr21	28341280	chr21:28341280:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:16:0,28,232	0/1:6,3:9:24,0,75	0/0:6,1:8:0,6,97
+chr21	28350605	chr21:28350605:M	GAGAGAGAGAGAGAGAGAGAGAG	<10.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,29:30:255,88,0	0/1:14,15:29:196,0,174
+chr21	28355701	chr21:28355701:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,19:40:240,0,250	0/1:22,18:41:193,0,255	0/1:26,20:47:232,0,255
+chr21	28356871	chr21:28356871:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,10:17:255,255,239,82,0,53	1/2:0,6,3:9:222,74,54,146,0,137	0/2:2,0,4:7:108,112,160,0,52,38
+chr21	28358629	chr21:28358629:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:30:148,0,202	0/1:16,24:42:255,0,152	0/1:20,21:43:246,0,247
+chr21	28364391	chr21:28364391:M	TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<9.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,13:14:255,34,0	1/1:0,8:9:214,24,0	1/1:0,18:18:255,54,0
+chr21	28370023	chr21:28370023:M	TTTTGTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:20,16:37:184,0,245	0/0:46,0:46:0,136,255
+chr21	28374560	chr21:28374560:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:49:0,145,255	0/1:24,14:38:138,0,255	0/0:55,0:57:0,167,255
+chr21	28383471	chr21:28383471:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,29,0:52:255,0,255,255,255,255	0/1:27,29,1:57:255,0,255,255,255,255	1/2:2,18,20:40:255,255,255,255,0,255
+chr21	28388007	chr21:28388007:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<18>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,14,0:27:255,0,255,255,223,255	0/1:11,15,0:30:255,0,249,255,197,255	1/2:0,14,6:23:255,105,102,255,0,255
+chr21	28406523	chr21:28406523:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:95,4,0	1/1:0,5:5:66,14,0	1/1:0,8:11:84,5,0
+chr21	28409173	chr21:28409173:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:96,12,0	1/1:0,4:4:120,12,0	1/1:0,4:4:124,12,0
+chr21	28413975	chr21:28413975:M	TTTTTCTTTTTTTTTTTTTTTTCTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,1:3:11,0,6	1/1:0,5:6:73,6,0	0/0:1,0:2:0,6,29
+chr21	28414160	chr21:28414160:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,41,0	1/1:3,28:31:255,39,0	1/1:2,21:24:255,35,0
+chr21	28416295	chr21:28416295:M	TTTTTTTTTGTTTTTTTTTTTTTT	<23>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,5:8:180,142,134,44,0,51	1/2:0,2,3:12:119,95,101,21,0,41	1/2:1,5,1:9:101,35,35,66,0,142
+chr21	28416535	chr21:28416535:M	GGTTTGGGTTTGGGTTT	<22.5>	.	.	Motif=GGTTTG	GT:AD:DP:PL	0/0:45,6:51:0,79,255	0/1:36,12:48:3,0,255	0/0:40,3:43:0,92,255
+chr21	28417429	chr21:28417429:M	GTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<24>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,1,7:13:201,78,64,176,53,173,123,0,98,103	2/3:0,3,2,13:22:238,169,167,143,70,126,99,33,0,70	1/2:0,6,5,4:17:255,126,125,138,0,129,230,98,104,235
+chr21	28438165	chr21:28438165:M	TCTCTCTCTCTCT	<10.5>,<11.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,1,51:53:255,255,255,158,124,0	2/2:0,2,27:29:255,255,255,87,55,0	1/2:0,10,13:24:255,169,99,142,0,72
+chr21	28446082	chr21:28446082:M	CTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTGTCTCTC	<23.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,18:18:255,54,0	0/1:7,9:16:196,0,141
+chr21	28454591	chr21:28454591:M	TGTGTGTGTTTGTGTGTGTGTGTGTGTGCATGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,15:16:255,28,0	1/1:0,18:19:255,42,0	0/1:10,12:22:162,0,121
+chr21	28463741	chr21:28463741:M	ACAAACAAACAAACAAACAAA	<5.5>	.	.	Motif=ACAA	GT:AD:DP:PL	1/1:1,17:20:108,25,0	1/1:0,28:31:193,52,0	1/1:0,26:30:185,49,0
+chr21	28471376	chr21:28471376:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,49:49:255,144,0	0/1:25,25:50:255,0,255
+chr21	28472428	chr21:28472428:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,0,13:15:195,201,248,9,43,0	1/2:0,10,17:27:255,237,207,166,0,90	0/2:8,2,12:24:162,130,255,0,102,82
+chr21	28480083	chr21:28480083:M	CTCTCTCTCTCTCTCT	<6>	.	.	Motif=CT	GT:AD:DP:PL	1/1:1,26:33:255,37,0	1/1:0,28:40:255,62,0	0/1:12,18:38:255,0,255
+chr21	28480098	chr21:28480098:M	TATATATATATATATATATAT	<7.5>,<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,23,13:41:255,188,80,255,0,255	1/1:0,42,0:46:255,137,0,255,130,255	0/2:12,2,19:37:255,245,255,0,255,208
+chr21	28482391	chr21:28482391:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:1,31:34:255,81,0	0/1:15,10:27:101,0,209
+chr21	28485051	chr21:28485051:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:43,8,0	1/1:0,7:7:108,20,0	0/1:1,4:5:49,0,1
+chr21	28486604	chr21:28486604:M	AAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,27:27:255,80,0	1/1:0,27:27:255,80,0
+chr21	28495194	chr21:28495194:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,39:41:255,83,0	1/1:0,30:32:255,93,0	1/1:1,43:45:255,114,0
+chr21	28499874	chr21:28499874:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,40,0	0/1:7,25:34:255,0,32	1/1:2,33:36:255,60,0
+chr21	28501934	chr21:28501934:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:69,12,0	1/1:0,2:4:53,11,0	0/1:3,3:7:41,0,31
+chr21	28506326	chr21:28506326:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:62,11,0	1/1:0,2:3:43,8,0	1/1:0,6:7:113,20,0
+chr21	28512558	chr21:28512558:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:64,12,0	0/1:1,3:5:35,0,14	0/1:1,2:3:25,0,8
+chr21	28516788	chr21:28516788:M	ATATATATATATATATATATA	<11.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,17,13:31:255,249,163,255,0,228	1/2:0,4,7:11:242,122,92,60,0,39	1/1:1,44,0:45:255,114,0,255,132,255
+chr21	28540406	chr21:28540406:M	ATATACTATATATATATATATATGTCATATATA	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,24:24:255,71,0	1/1:0,13:13:231,38,0	1/1:1,31:32:255,76,0
+chr21	28544464	chr21:28544464:M	TATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4:6:42,11,0	1/1:0,1:1:10,3,0	1/1:0,2:2:21,5,0
+chr21	28559670	chr21:28559670:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:13:195,20,0	0/1:1,6:11:91,0,8	1/1:0,8:10:121,9,0
+chr21	28561175	chr21:28561175:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:42:255,124,0	1/1:1,53:54:255,141,0	1/1:1,42:45:255,104,0
+chr21	28562301	chr21:28562301:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:19:72,0,155	0/1:11,10:23:107,0,145	0/0:29,3:34:0,43,255
+chr21	28562488	chr21:28562488:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:140,12,0	0/1:3,7:10:87,0,20	1/1:1,9:11:146,14,0
+chr21	28563171	chr21:28563171:M	CTCTCCCTCTCCCTCTCCCTCTCCC	<5.2>	.	.	Motif=CTCTCC	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,27:27:255,79,0	1/1:0,30:30:255,89,0
+chr21	28566812	chr21:28566812:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:168,17,0	0/1:2,4:8:55,0,14	1/1:2,11:13:155,4,0
+chr21	28569477	chr21:28569477:M	ACACACACACACACACACACACACACACACACACACACAC	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,15:15:255,45,0	1/1:0,9:9:234,27,0	1/1:0,15:19:255,38,0
+chr21	28569628	chr21:28569628:M	ACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,34:34:255,100,0	1/1:0,43:43:255,127,0
+chr21	28572830	chr21:28572830:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<24>,<25>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,5,0:19:255,135,90,255,0,255,255,86,255,255	2/3:0,0,5,9:14:255,255,255,149,149,109,84,83,0,42	1/2:0,4,7,0:12:255,184,165,116,0,93,237,118,116,218
+chr21	28580569	chr21:28580569:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:55,9,0	1/1:0,4:4:70,12,0	0/1:1,6:8:85,0,4
+chr21	28585330	chr21:28585330:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<10.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:8,3:11:22,0,113	1/1:0,25:25:255,74,0
+chr21	28587176	chr21:28587176:M	AAAAAAAAAAAAAA	<10>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,12:25:153,222,255,0,221,152	0/1:16,14,1:31:255,0,255,255,255,255	2/2:1,0,29:30:255,255,255,70,90,0
+chr21	28588983	chr21:28588983:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:12,5:19:34,0,166	0/0:17,2:24:0,29,255
+chr21	28595764	chr21:28595764:M	TTTATTTTACTTTATTTATTTATTTATTTATTTATTT	<10.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,9:22:109,0,186	0/1:6,15:21:210,0,47	1/1:0,25:25:255,74,0
+chr21	28601605	chr21:28601605:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<15.5>,<21.5>,<24.5>	.	.	Motif=TC	GT:AD:DP:PL	1/3:0,12,0,7:20:255,204,165,255,203,255,255,0,255,255	0/1:12,4,0,0:16:76,0,255,111,202,255,112,255,255,255	2/3:2,0,10,6:19:255,255,255,135,170,134,138,255,0,255
+chr21	28603550	chr21:28603550:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:11,0,2:18:46,83,255,0,255,255	1/2:0,6,6:14:255,163,142,179,0,161	0/0:22,0,0:23:0,69,255,69,255,255
+chr21	28608389	chr21:28608389:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:22:135,0,135	0/1:21,18:40:204,0,246	1/1:0,32:35:255,101,0
+chr21	28609568	chr21:28609568:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:18:159,0,57	1/1:0,14:19:255,52,0	0/0:15,0:18:0,50,255
+chr21	28611912	chr21:28611912:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,0:11:0,33,255,32,222,193	0/1:4,8,0:13:186,0,77,131,65,165	0/2:8,0,4:13:31,57,255,0,143,109
+chr21	28613075	chr21:28613075:M	GATAGATAGATAGATAGATAGAAAGATAGATAGATAGATAGATAGACAGATCTACAGATAGATAGATA	<16>	.	.	Motif=GATA	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:9,5:14:49,0,121	0/0:11,0:11:0,32,206
+chr21	28613620	chr21:28613620:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1,0:2:45,6,0,33,6,29	2/2:0,0,11:12:255,208,177,32,32,0	1/1:0,8,0:9:255,27,0,167,26,144
+chr21	28617791	chr21:28617791:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,8:24:255,127,82,255,0,196	1/2:0,15,13:29:255,192,144,255,0,191	1/1:0,36,0:37:255,111,0,255,109,255
+chr21	28631798	chr21:28631798:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,1:39:0,96,255	0/0:33,2:38:0,63,255	0/1:21,26:48:255,0,240
+chr21	28635102	chr21:28635102:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,3:33:0,41,255	0/0:21,3:25:0,11,255	0/1:13,6:20:58,0,176
+chr21	28647509	chr21:28647509:M	AAAAAAAAAAAAAAAAAGAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:6:52,0,17	1/1:1,7:8:100,7,0	1/1:0,6:8:122,23,0
+chr21	28649850	chr21:28649850:M	AATAATAAAATAATAA	<6.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/0:43,0:43:0,127,255	0/1:15,11:26:130,0,204
+chr21	28672960	chr21:28672960:M	AGAAAGAAAAAAAATAAAAAAAGAGAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGA	<16>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:5,6:11:74,0,55	0/1:4,0:8:1,0,50	0/1:3,1:5:6,0,40
+chr21	28700831	chr21:28700831:M	ACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/0:36,0:36:0,108,255	0/1:14,24:38:255,0,255
+chr21	28701547	chr21:28701547:M	CACACACACACATACACACACACACACACACACACACACACACACACACA	<15>,<24>	.	.	Motif=CA	GT:AD:DP:PL	0/2:8,0,13:21:169,228,255,0,142,81	0/2:7,0,11:19:142,194,255,0,118,63	0/1:4,15,1:20:255,0,68,255,52,255
+chr21	28702310	chr21:28702310:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:43:0,126,255	0/0:44,1:47:0,119,255	0/1:25,24:51:255,0,255
+chr21	28704558	chr21:28704558:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:23:0,67,255	0/1:9,4:15:23,0,124	0/1:10,23:35:255,0,77
+chr21	28705329	chr21:28705329:M	CTTTTCTTTTCTTT	<2>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/0:49,0:49:0,147,255	0/1:27,25:52:255,0,255
+chr21	28707257	chr21:28707257:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:20:0,57,255	0/0:18,0:21:0,62,255	0/1:16,11:30:221,0,255
+chr21	28708225	chr21:28708225:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/0:37,0:37:0,109,255	0/1:21,36:57:255,0,220
+chr21	28718618	chr21:28718618:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,2:45:0,95,255	0/0:45,0:45:0,132,255	0/1:30,33:63:255,0,255
+chr21	28724548	chr21:28724548:M	TTGTTTGTTTGTTTGTTTGTTT	<4.5>	.	.	Motif=TTGT	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/0:40,0:40:0,118,255	0/1:18,24:42:255,0,215
+chr21	28726870	chr21:28726870:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:17:0,50,255	0/0:18,0:22:0,64,255	0/1:9,6:20:118,0,217
+chr21	28730374	chr21:28730374:M	ACACACACAGACACACACACACACACACACACACACACACACACA	<21.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18,0:19:255,56,0,255,57,255	1/1:0,16,0:19:255,55,0,255,57,255	1/2:0,11,5:18:255,137,102,201,0,255
+chr21	28731760	chr21:28731760:M	AAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,96,255	0/0:34,0:39:0,113,255	0/1:12,28:41:255,0,209
+chr21	28746673	chr21:28746673:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:38:255,90,0	1/1:0,41:42:255,123,0	1/1:0,43:45:255,131,0
+chr21	28753357	chr21:28753357:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:15:0,39,255	0/0:8,0:9:0,27,221	0/1:15,16:35:255,0,255
+chr21	28761600	chr21:28761600:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:38:0,111,255	0/0:30,2:34:0,64,255	0/1:15,15:31:179,0,189
+chr21	28767425	chr21:28767425:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:35:0,103,255	0/0:46,0:47:0,138,255	0/1:14,20:34:255,0,157
+chr21	28771007	chr21:28771007:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/0:42,0:42:0,124,255	0/1:22,25:47:255,0,255
+chr21	28774589	chr21:28774589:M	AAAAAAAAAGAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:38:0,114,255	0/0:45,0:45:0,135,255	0/1:21,23:45:255,0,255
+chr21	28808412	chr21:28808412:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:24,1,12:38:114,201,255,0,255,255	1/2:3,16,15:35:255,207,255,232,0,255	0/2:19,2,9:30:70,121,255,0,242,255
+chr21	28811250	chr21:28811250:M	GAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAGAAAG	<33.8>	.	.	Motif=GAAA	GT:AD:DP:PL	0/0:22,0:24:0,66,255	0/0:12,0:14:0,36,255	0/1:12,7:19:17,0,250
+chr21	28819545	chr21:28819545:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:29:0,61,255	0/0:13,1:15:0,27,210	0/1:11,4:16:22,0,154
+chr21	28822573	chr21:28822573:M	ATATATATATATATATATACACATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/0:23,0:24:0,68,255	0/1:19,14:34:156,0,255
+chr21	28830878	chr21:28830878:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,3,13:18:214,147,185,19,2,0	2/2:1,0,14:15:206,209,233,28,43,0	1/2:1,6,6:13:201,64,70,79,0,60
+chr21	28856084	chr21:28856084:M	TTATTTTATTT	<1.2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:54,0:54:0,160,255	0/0:32,0:32:0,94,255	0/1:21,22:43:255,0,255
+chr21	28863411	chr21:28863411:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<12>	.	.	Motif=TA	GT:AD:DP:PL	0/0:0,0:4:0,0,0	1/1:0,5:5:155,15,0	.
+chr21	28864809	chr21:28864809:M	AGACAGACAGACAGA	<1.8>	.	.	Motif=AGAC	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,3:4:80,9,0	0/0:26,2:28:0,31,255
+chr21	28866176	chr21:28866176:M	ACACACACACACA	<7>,<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,9:19:234,166,129,56,0,153	1/2:0,3,11:14:255,211,183,17,0,19	0/0:25,3,2:30:0,31,114,36,162,255
+chr21	28877180	chr21:28877180:M	GAGGGAGGGAGGAAGGAAGGGAGGGAAGGGAG	<3.2>,<9>	.	.	Motif=GAGG	GT:AD:DP:PL	1/2:1,3,15:19:223,197,255,53,0,22	1/2:1,4,10:15:185,124,239,77,0,59	0/1:11,2,1:16:31,0,255,50,140,173
+chr21	28879081	chr21:28879081:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:174,18,0	1/1:0,1:1:29,3,0	1/1:0,2:3:67,9,0
+chr21	28880929	chr21:28880929:M	AAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,55,255	0/0:17,0:22:0,61,255	0/1:4,3:10:32,0,61
+chr21	28881626	chr21:28881626:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,6:8:200,104,82,35,0,12	1/2:0,3,4:8:188,67,44,60,0,39	0/2:2,0,1:4:19,20,76,0,54,48
+chr21	28886202	chr21:28886202:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:30:255,84,0	1/1:0,36:40:255,108,0	0/1:21,14:38:255,0,255
+chr21	28888334	chr21:28888334:M	TTTTTTTTTTTTCTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,51,0	1/1:1,18:19:255,30,0	0/1:17,8:28:149,0,255
+chr21	28889765	chr21:28889765:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,24:26:255,255,255,75,72,0	1/2:0,7,11:18:255,255,255,182,0,145	1/2:0,12,6:20:255,174,131,255,0,255
+chr21	28894577	chr21:28894577:M	AAAAAAAAAAAGAAGAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:32:255,75,0	1/1:0,32:33:255,96,0	0/1:13,18:32:231,0,151
+chr21	28901231	chr21:28901231:M	AAGAAAAAAAAGAAAAGAAAAGAAAA	<4.8>	.	.	Motif=AAGAA	GT:AD:DP:PL	1/1:1,38:39:255,94,0	1/1:0,27:27:255,81,0	0/1:16,13:29:211,0,255
+chr21	28901258	chr21:28901258:M	ATATATATATATATATGTATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,34:35:255,100,0	1/1:0,27:27:255,79,0	0/1:20,16:36:168,0,236
+chr21	28914934	chr21:28914934:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,17:18:255,52,0	1/1:0,26:27:255,79,0
+chr21	28926896	chr21:28926896:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:30,24:55:255,0,255	0/0:31,2:37:0,72,255	0/1:16,14:33:169,0,215
+chr21	28931067	chr21:28931067:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,22:32:255,0,179	0/0:32,0:37:0,96,255	1/1:0,40:41:255,120,0
+chr21	28933678	chr21:28933678:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,14:28:151,0,42	0/0:19,0:21:0,46,246	0/1:6,11:21:92,0,65
+chr21	28935840	chr21:28935840:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:23,0,23	0/0:12,1:14:0,24,192	0/1:7,4:12:34,0,94
+chr21	28947891	chr21:28947891:M	AAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,80,0	0/1:11,4:17:81,0,255	0/1:11,7:20:139,0,255
+chr21	28955923	chr21:28955923:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:83,9,0	0/0:4,0:6:0,15,123	0/1:3,6:9:138,0,58
+chr21	28960357	chr21:28960357:M	AAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAAAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:15:0,44,255	0/0:23,0:23:0,67,255	0/1:16,8:24:72,0,214
+chr21	28976119	chr21:28976119:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:32:165,0,230	0/1:17,25:42:255,0,174	0/0:32,0:33:0,87,255
+chr21	28977374	chr21:28977374:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:30,0,66	0/0:12,0:12:0,35,204	0/1:4,8:15:126,0,27
+chr21	28977928	chr21:28977928:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,4:23:9,0,255	0/1:23,8:31:49,0,255	0/0:35,0:35:0,103,255
+chr21	28980570	chr21:28980570:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,29:49:255,0,225	0/1:28,22:52:248,0,255	0/0:52,0:53:0,156,255
+chr21	28984653	chr21:28984653:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/0:46,1:48:0,121,255	0/1:16,16:33:195,0,205
+chr21	28988142	chr21:28988142:M	AAAAAAAAAAAAAAACAACAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,4:10:41,0,76	0/1:6,5:11:51,0,69	0/0:13,1:15:0,26,216
+chr21	28988467	chr21:28988467:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,3,4:20:15,16,232,0,146,212	0/0:23,1,1:25:0,56,255,56,255,255	1/2:1,19,12:35:255,200,244,255,0,255
+chr21	28991291	chr21:28991291:M	AAAAAAAAAAAAAAGAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:27:255,62,0	1/1:0,23:25:255,73,0	1/1:0,35:38:255,108,0
+chr21	28994777	chr21:28994777:M	ATATATATATATATATATTTATGCATATATATATAATATA	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,9:14:130,0,53	0/1:7,9:16:114,0,78	0/0:13,0:13:0,38,240
+chr21	28996019	chr21:28996019:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:27:0,76,255	0/1:11,8:21:79,0,130	0/1:16,7:25:50,0,203
+chr21	28996948	chr21:28996948:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:32:137,0,222	0/0:24,0:26:0,76,255	0/1:1,13:22:207,0,9
+chr21	29002115	chr21:29002115:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,18:20:255,22,0	0/0:11,1:13:0,21,184	0/1:14,17:33:219,0,164
+chr21	29003606	chr21:29003606:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:153,57,42,81,0,68	2/2:0,0,4:4:115,112,109,12,12,0	1/2:0,4,2:8:171,49,30,119,0,111
+chr21	29009393	chr21:29009393:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,13:19:196,0,17	0/1:7,10:18:129,0,68	0/0:9,1:10:0,12,142
+chr21	29010608	chr21:29010608:M	AAAAAATAAAAATAAAAAAAAAAAACCAAAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:19:63,0,144	0/0:7,1:8:0,6,103	0/1:3,2:5:21,0,38
+chr21	29012771	chr21:29012771:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,1:30:0,70,255	0/1:14,24:39:255,0,145	0/0:50,2:53:0,111,255
+chr21	29013689	chr21:29013689:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:13:0,35,207	0/0:16,0:17:0,49,255	0/1:2,3:5:36,0,19
+chr21	29016564	chr21:29016564:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,30:47:255,0,180	0/1:21,24:45:255,0,239	0/0:41,0:41:0,121,255
+chr21	29019351	chr21:29019351:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:29:255,86,0	1/1:0,37:38:255,114,0	1/1:0,27:28:255,81,0
+chr21	29019534	chr21:29019534:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,16,0:17:255,32,0,255,50,255	1/2:2,5,6:14:185,69,66,38,0,70	0/1:14,11,0:25:122,0,176,164,246,255
+chr21	29021802	chr21:29021802:M	AAAAAAAAGAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,13:24:179,0,115	0/1:13,16:31:190,0,155	0/1:12,15:30:187,0,151
+chr21	29026456	chr21:29026456:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:20,0,9	0/1:4,8:12:100,0,33	1/1:0,8:9:149,26,0
+chr21	29026538	chr21:29026538:M	TTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:4:0,12,96	0/0:0,0:1:0,3,12	1/1:0,6:7:175,17,0
+chr21	29028124	chr21:29028124:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,7:22:63,0,211	0/1:13,7:22:66,0,173	0/1:7,6:13:69,0,87
+chr21	29034298	chr21:29034298:M	TTTTCTTTTTTTTTTTTTTTTTATTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,9:18:117,0,91	0/1:11,8:19:81,0,132	0/1:6,5:13:60,0,77
+chr21	29037580	chr21:29037580:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,1:4:5,14,90,0,51,40	0/1:2,2,0:4:52,0,44,33,32,54	1/2:0,3,3:6:126,42,33,51,0,33
+chr21	29044448	chr21:29044448:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,2,6:15:67,73,225,0,72,105	1/2:3,13,3:19:178,7,36,179,0,255	0/0:15,0,1:16:0,47,255,29,254,251
+chr21	29047910	chr21:29047910:M	TGTGTGTGTGTGT	<4.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/0:33,0:33:0,99,255	0/1:26,26:53:255,0,255
+chr21	29048049	chr21:29048049:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,7:15:162,0,152	0/0:6,0:7:0,18,167	1/1:0,7:9:193,20,0
+chr21	29054601	chr21:29054601:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:5:17,4,0	1/1:0,4:8:155,18,0	1/1:0,0:2:28,6,0
+chr21	29057167	chr21:29057167:M	TTTTTTTTTTTTTTTCTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:25:99,0,200	0/1:10,11:21:130,0,112	0/0:27,0:28:0,82,255
+chr21	29058594	chr21:29058594:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:174,29,0	1/1:3,17:21:254,9,0	1/1:0,15:16:255,44,0
+chr21	29060086	chr21:29060086:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12:30:127,0,236	0/0:24,1:26:0,59,255	1/1:0,27:28:255,82,0
+chr21	29066082	chr21:29066082:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,13:14:255,39,0	1/1:0,12:12:255,36,0
+chr21	29083833	chr21:29083833:M	TGTGTGTGTGTGTGTATATATGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:27:0,78,255	0/0:14,0:14:0,41,251	0/1:13,7:20:71,0,182
+chr21	29087579	chr21:29087579:M	TTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,1:9:13,0,78	0/1:3,1:6:11,0,44	1/1:0,6:9:123,23,0
+chr21	29089169	chr21:29089169:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,3:3:89,89,89,9,9,0	2/2:0,0,2:4:86,86,86,12,12,0	1/1:0,11,0:13:255,39,0,255,39,255
+chr21	29095142	chr21:29095142:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	0/1:15,12:27:130,0,185	1/1:2,13:16:209,10,0
+chr21	29100084	chr21:29100084:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:12:97,0,27	0/1:5,2:8:19,0,60	0/0:1,0:1:0,3,17
+chr21	29102460	chr21:29102460:M	TCTCTCTCTCTCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:22,0:24:0,69,255	0/0:17,0:19:0,56,255	0/1:11,10:23:164,0,221
+chr21	29102478	chr21:29102478:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2,4:13:52,0,89,2,19,35	0/1:4,1,0:9:1,0,113,12,76,73	1/2:1,5,7:16:181,61,65,64,0,41
+chr21	29111265	chr21:29111265:M	AAAAACAAAACAACAACAACAACAACAACAAAAA	<5.2>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,31:31:255,93,0	0/1:18,19:37:255,0,255	1/1:0,30:30:255,90,0
+chr21	29119663	chr21:29119663:M	TTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,8,5:15:202,88,93,104,0,204	0/1:11,5,0:17:35,0,148,84,194,255	1/2:1,6,2:11:139,45,39,88,0,150
+chr21	29120180	chr21:29120180:M	TTTTCTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,23:47:255,0,255	0/0:32,0:32:0,94,255	0/1:16,18:34:231,0,192
+chr21	29120657	chr21:29120657:M	TTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTGTTTCTTTCTTTCCTTTCTCTCCTTCTCTCTTTCTTT	<17>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,9:9:146,26,0	0/1:3,3:6:30,0,30	1/1:0,7:7:112,20,0
+chr21	29121056	chr21:29121056:M	ATATATATATATAGTGTATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,3:3:35,8,0	0/0:22,0:22:0,66,255	.
+chr21	29123056	chr21:29123056:M	TTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:83,9,0	0/1:1,3:6:91,0,10	1/1:0,1:2:42,6,0
+chr21	29128306	chr21:29128306:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:33:190,0,209	0/0:21,0:24:0,69,255	0/1:18,11:29:114,0,242
+chr21	29131818	chr21:29131818:M	TATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,15:37:255,0,255	0/0:57,0:57:0,171,255	0/1:32,21:53:255,0,255
+chr21	29136508	chr21:29136508:M	TTTTTTTCTTTTCTTTTTTATTTTATTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:17,8:25:70,0,232	1/1:0,33:33:255,97,0
+chr21	29139896	chr21:29139896:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:51,9,0	0/0:1,0:1:0,3,16	.
+chr21	29141513	chr21:29141513:M	AAAAAGAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:17:149,0,43	0/1:13,15:31:184,0,142	0/1:10,7:17:72,0,124
+chr21	29150772	chr21:29150772:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:24:0,52,255	0/1:4,6:10:73,0,39	0/0:23,2:26:0,41,255
+chr21	29154392	chr21:29154392:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:28:255,82,0	0/1:13,14:29:171,0,154	1/1:0,32:33:255,97,0
+chr21	29158918	chr21:29158918:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:7:51,0,15	0/1:4,4:8:44,0,43	0/1:6,6:13:73,0,65
+chr21	29159826	chr21:29159826:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,1,36:38:255,255,255,93,93,0	1/2:1,24,16:41:255,224,177,255,0,255	2/2:0,0,45:45:255,255,255,133,133,0
+chr21	29162312	chr21:29162312:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:40:255,108,0	0/1:25,23:49:255,0,255	1/1:1,40:42:255,96,0
+chr21	29162684	chr21:29162684:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,16:21:232,0,30	0/1:17,11:30:116,0,211	0/1:18,16:34:187,0,223
+chr21	29163353	chr21:29163353:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,29:47:255,0,210	0/0:56,0:56:0,165,255	0/1:25,29:54:255,0,255
+chr21	29163694	chr21:29163694:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:19:37,0,171	0/1:10,3:15:16,0,133	0/1:7,9:17:111,0,70
+chr21	29167694	chr21:29167694:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,4:11:228,70,41,89,0,65	1/2:1,6,2:13:189,7,35,75,0,77	1/2:0,6,5:11:255,86,55,103,0,71
+chr21	29170622	chr21:29170622:M	TCTCTCTCTCTTTCTCT	<7>	.	.	Motif=TC	GT:AD:DP:PL	0/1:23,9:41:174,0,255	0/0:43,0:43:0,129,255	0/1:19,15:42:255,0,255
+chr21	29170638	chr21:29170638:M	TTTTTTTTTTCTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,20:39:242,0,224	0/0:37,0:37:0,108,255	0/1:13,18:31:222,0,136
+chr21	29170940	chr21:29170940:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:40:255,0,255	1/1:0,29:33:255,95,0	0/1:17,20:40:255,0,255
+chr21	29171807	chr21:29171807:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:8:116,0,33	1/1:0,4:6:128,17,0	0/1:3,5:11:112,0,68
+chr21	29172237	chr21:29172237:M	TTTTCTTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,4:12:184,72,92,144,0,222	1/1:0,41,0:43:255,126,0,255,129,255	1/2:0,19,2:23:255,35,3,255,0,255
+chr21	29176088	chr21:29176088:M	TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCT	<19>,<28>,<36>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	2/4:0,1,6,0,4:12:187,158,168,25,6,20,190,166,33,197,152,133,0,160,154	1/3:0,2,2,3,1:10:95,42,87,53,39,97,62,0,10,50,97,83,94,54,145	1/2:0,3,4,0,0:11:234,116,109,114,0,106,236,121,119,240,236,122,120,241,242
+chr21	29176172	chr21:29176172:M	TTTTTTTCTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:12:78,21,0	1/1:1,10:18:87,19,0	1/1:0,11:17:107,29,0
+chr21	29179544	chr21:29179544:M	CAAACAAACAAACAAACA	<5.5>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:12,15:27:193,0,139	1/1:0,34:34:255,100,0
+chr21	29180911	chr21:29180911:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>,<13.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:9,15,1:26:213,0,118,255,136,255	1/2:0,2,9:11:166,160,228,35,0,25	0/2:11,0,11:23:150,211,255,0,174,139
+chr21	29186228	chr21:29186228:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<12>,<13>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,1,28:29:255,255,255,84,67,0	1/2:1,11,14:26:255,232,177,150,0,134	2/2:0,0,32:32:255,255,255,96,94,0
+chr21	29186698	chr21:29186698:M	TGTGTGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,40:42:255,105,0	0/1:21,14:36:162,0,255	1/1:1,30:32:255,73,0
+chr21	29192034	chr21:29192034:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:127,15,0	.	1/1:0,1:1:28,3,0
+chr21	29193716	chr21:29193716:M	TTTGTTTTTTTGTTTGTTTGTTTTTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,23:23:255,68,0	1/1:0,28:28:255,83,0
+chr21	29202815	chr21:29202815:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:31:255,87,0	1/1:1,31:35:255,74,0	1/1:0,29:31:255,89,0
+chr21	29209502	chr21:29209502:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:15:34,0,123	0/1:14,5:20:27,0,175	0/1:10,4:18:28,0,140
+chr21	29217750	chr21:29217750:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:10:139,12,0	1/1:0,10:13:182,33,0	1/1:1,12:16:223,29,0
+chr21	29220759	chr21:29220759:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:32:237,0,163	1/1:0,38:40:255,114,0	0/1:13,15:29:193,0,149
+chr21	29231552	chr21:29231552:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,14:25:186,0,131	0/1:6,7:13:85,0,67	0/1:11,16:28:209,0,126
+chr21	29240964	chr21:29240964:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0,0:10:0,29,174,29,174,174	0/2:6,2,4:12:32,33,143,0,51,85	0/1:3,3,0:6:34,0,34,50,43,117
+chr21	29281612	chr21:29281612:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,16:27:216,0,123	0/1:10,11:22:139,0,110	0/0:24,1:25:0,55,255
+chr21	29296050	chr21:29296050:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,7:18:255,103,70,190,0,141	1/2:0,4,4:8:154,55,43,66,0,44	2/2:0,1,7:8:131,106,103,23,6,0
+chr21	29306170	chr21:29306170:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,16,8:24:255,255,255,122,144,74,255,255,0,218	1/3:0,12,3,9:26:255,181,237,255,102,255,255,0,255,255	0/2:10,0,10,1:21:240,255,255,0,255,235,159,255,158,255
+chr21	29309258	chr21:29309258:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,2:23:0,32,255	0/1:8,11:21:136,0,85	0/0:19,1:22:0,46,255
+chr21	29324557	chr21:29324557:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,24:25:255,75,0	1/1:0,35:35:255,105,0	1/1:0,29:32:255,93,0
+chr21	29339630	chr21:29339630:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:119,20,0	1/1:2,8:13:136,3,0	1/1:1,8:11:146,14,0
+chr21	29344635	chr21:29344635:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<17.5>,<18.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0,0:29:255,87,0,255,85,255,255,87,255,255	1/3:0,14,1,10:26:255,174,222,255,155,255,255,0,234,255	1/2:0,18,12,0:30:255,213,126,255,0,233,255,180,255,255
+chr21	29346278	chr21:29346278:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:44:255,129,0	1/1:1,37:39:255,97,0	1/1:1,62:63:255,167,0
+chr21	29358740	chr21:29358740:M	AGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAA	<20.2>	.	.	Motif=AGAA	GT:AD:DP:PL	.	1/1:0,6:6:160,18,0	.
+chr21	29360846	chr21:29360846:M	AAAAAAAAAAAAAAAACAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,54,255	0/1:6,7:14:141,0,118	0/0:11,0:13:0,33,255
+chr21	29377731	chr21:29377731:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:43,0:45:0,131,255	0/1:24,35:60:255,0,255
+chr21	29380744	chr21:29380744:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<8.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:11,15,0:26:255,0,251,255,211,255	0/0:8,0,0:8:0,24,239,24,168,146	1/2:0,9,10:19:255,187,255,255,0,236
+chr21	29381778	chr21:29381778:M	TGTGTGTGCCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:19,16:35:186,0,239	0/0:28,0:28:0,83,255
+chr21	29410941	chr21:29410941:M	TATATATATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,3:6:48,4,0	.	1/1:0,0:1:0,0,0
+chr21	29423027	chr21:29423027:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<13>	.	.	Motif=AG	GT:AD:DP:PL	0/0:26,0:28:0,78,255	0/1:16,10:28:192,0,255	0/0:42,1:44:0,102,255
+chr21	29431086	chr21:29431086:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,6,0:13:158,0,102,164,73,218	0/2:3,0,5:10:65,72,187,0,39,15	1/2:0,6,6:15:239,99,128,143,0,115
+chr21	29441829	chr21:29441829:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,46:47:255,120,0	0/1:23,23:47:255,0,255	0/1:25,25:51:255,0,255
+chr21	29443197	chr21:29443197:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,16:35:194,0,241	0/0:36,0:38:0,111,255	0/1:18,18:38:217,0,236
+chr21	29446397	chr21:29446397:M	AATTAATTAATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:12,20:32:255,0,138	0/0:26,0:26:0,77,255	0/1:15,13:28:162,0,200
+chr21	29450360	chr21:29450360:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:82,0,12	1/1:0,4:5:77,14,0	1/1:0,4:5:70,12,0
+chr21	29451825	chr21:29451825:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,18:33:255,0,219	0/0:21,0:24:0,63,255	0/1:12,19:33:255,0,240
+chr21	29454957	chr21:29454957:M	AAAAATAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,15:32:182,0,218	0/0:27,0:28:0,82,255	0/1:17,25:43:255,0,189
+chr21	29457518	chr21:29457518:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:4,0:6:0,13,123	0/0:0,0:4:0,6,30	1/1:1,12:15:255,11,0
+chr21	29461527	chr21:29461527:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,24:47:255,0,255	0/0:40,0:40:0,118,255	0/1:32,21:54:234,0,255
+chr21	29461666	chr21:29461666:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,3:4:36,0,4	0/1:2,0:3:3,0,24
+chr21	29461842	chr21:29461842:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10:20:129,0,109	0/0:29,1:31:0,73,255	0/1:14,11:27:131,0,185
+chr21	29465939	chr21:29465939:M	TTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,8,3:17:178,2,40,119,0,196	0/2:10,0,5:20:111,132,255,0,247,255	0/1:9,12,0:25:252,0,215,255,255,255
+chr21	29469147	chr21:29469147:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:11:42,0,87	0/1:15,5:20:28,0,200	0/0:17,0:19:0,53,255
+chr21	29469791	chr21:29469791:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:4:25,0,8	0/0:4,0:5:0,14,79	0/1:2,5:8:77,0,10
+chr21	29474442	chr21:29474442:M	CGCGCGCGCGCGC	<5.5>	.	.	Motif=CG	GT:AD:DP:PL	1/1:0,5:5:65,14,0	0/1:1,2:4:14,0,12	1/1:0,1:1:13,3,0
+chr21	29474454	chr21:29474454:M	CACACACACACACACACACACACACACACCACA	<21.5>,<22.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,22:30:255,255,201,93,0,4	2/2:0,3,19:23:255,251,184,68,16,0	1/2:0,9,16:25:255,201,128,116,0,42
+chr21	29476701	chr21:29476701:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,1:2:12,0,5	1/1:1,4:6:63,0,0	1/1:1,9:10:140,12,0
+chr21	29477669	chr21:29477669:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:21:255,44,0	1/1:0,29:29:255,84,0	1/1:1,21:22:255,47,0
+chr21	29480269	chr21:29480269:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,49:49:255,145,0	1/1:0,43:43:255,127,0	1/1:1,49:50:255,129,0
+chr21	29482380	chr21:29482380:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,4:10:255,73,44,110,0,82	1/2:0,5,4:13:255,76,42,113,0,85	1/2:0,9,3:13:255,54,19,161,0,127
+chr21	29485336	chr21:29485336:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:220,27,0	1/1:0,11:13:255,36,0	1/1:0,13:15:255,39,0
+chr21	29497688	chr21:29497688:M	TATATATATATATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,44:47:255,141,0	1/1:0,45:45:255,135,0	1/1:0,52:56:255,165,0
+chr21	29505365	chr21:29505365:M	AAAAAGAAAAAAAAGAAAACAAACAAAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,18:18:255,53,0	1/1:0,26:26:255,77,0
+chr21	29505561	chr21:29505561:M	AAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:5:145,18,3,71,0,57	1/2:0,1,3:6:129,63,49,18,0,4	1/2:0,0,2:3:66,35,26,11,0,4
+chr21	29519863	chr21:29519863:M	TATATATATATAAAATAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7:9:230,24,0	1/1:0,0:2:35,6,0	1/1:0,0:1:1,0,0
+chr21	29540971	chr21:29540971:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:15:255,42,0	1/1:0,23:26:255,75,0	1/1:0,20:24:255,71,0
+chr21	29541576	chr21:29541576:M	TTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:18:255,53,0	1/1:0,8:9:255,27,0	1/1:0,11:14:255,39,0
+chr21	29542033	chr21:29542033:M	GTGTGTGTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,43:47:255,137,0	1/1:0,41:42:255,126,0	1/1:0,36:36:255,108,0
+chr21	29558346	chr21:29558346:M	ATATATATATATATATTTCATATATATAT	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:21,14:35:60,0,136	0/1:8,21:29:149,0,9	0/1:20,19:39:103,0,113
+chr21	29558377	chr21:29558377:M	CACACACACACACACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,41:41:255,121,0	1/1:2,15:17:226,15,0	1/1:3,43:46:255,81,0
+chr21	29570844	chr21:29570844:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:27:255,32,0	1/1:1,22:28:255,50,0	1/1:5,30:35:255,12,0
+chr21	29574684	chr21:29574684:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:64,11,0	1/1:0,1:2:29,6,0	1/1:0,5:5:87,15,0
+chr21	29579956	chr21:29579956:M	TGTGTGTGTGT	<4.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,8:8:148,24,0	1/1:0,1:1:18,3,0	1/1:0,1:1:18,3,0
+chr21	29580488	chr21:29580488:M	TCTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,40:40:255,118,0	1/1:0,55:55:255,162,0
+chr21	29589425	chr21:29589425:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:9,20:29:255,0,72	0/0:15,2:18:0,16,249
+chr21	29591447	chr21:29591447:M	TCTTTTTCTTTTTC	<1.3>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:28,19:47:207,0,255	0/0:45,0:45:0,133,255
+chr21	29594180	chr21:29594180:M	TGTGTATGTGTGTGTGTGTGTGTGTGTATGTG	<14>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:33:0,90,255	0/1:12,16:32:255,0,238	0/0:27,0:28:0,81,255
+chr21	29595341	chr21:29595341:M	TTTTTTTTTTTTTTTTTCTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,4:16:25,0,170	0/1:13,4:17:19,0,173	0/0:18,1:21:0,43,255
+chr21	29606019	chr21:29606019:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:25:0,56,255	0/1:11,10:21:109,0,126	0/0:23,1:25:0,55,255
+chr21	29606665	chr21:29606665:M	AAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/1:8,17:26:255,0,142	0/0:21,0:22:0,66,255
+chr21	29606794	chr21:29606794:M	TCTTGTCTTGTCTTGTCTTGTCTTGT	<4.2>	.	.	Motif=TCTTG	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:17,12:29:133,0,224	0/0:37,0:37:0,109,255
+chr21	29619124	chr21:29619124:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,0,0:7:0,21,196,21,143,124	0/2:5,0,5:11:52,70,205,0,93,65	0/1:7,3,0:11:52,0,173,51,127,152
+chr21	29629195	chr21:29629195:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:28:0,80,255	0/1:7,7:16:71,0,91	0/1:8,17:27:213,0,79
+chr21	29632513	chr21:29632513:M	ACACACACACACACACACACACAC	<7>	.	.	Motif=AC	GT:AD:DP:PL	0/0:39,0:40:0,120,255	0/1:13,15:29:255,0,255	0/0:35,0:36:0,108,255
+chr21	29640162	chr21:29640162:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:18,20:39:250,0,205	0/0:40,0:41:0,120,255
+chr21	29654602	chr21:29654602:M	AAAGAAAGAAGGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAAAG	<13.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:10,9:19:96,0,112	0/0:23,0:24:0,70,255
+chr21	29695437	chr21:29695437:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<9.2>,<10.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,20,0:31:255,91,0,255,85,255	0/1:5,11,0:16:188,0,57,130,42,135	1/2:0,18,14:39:255,116,75,255,0,175
+chr21	29695477	chr21:29695477:M	TATATATATATAT	<4.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,16,15:32:255,255,255,255,0,255	1/2:0,8,7:18:255,177,219,174,0,255	1/2:7,8,23:39:255,255,255,23,0,255
+chr21	29707425	chr21:29707425:M	TCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC	<7.5>,<33.8>	.	.	Motif=TCCC	GT:AD:DP:PL	2/2:0,0,3:3:38,38,38,8,8,0	1/2:0,3,4:7:116,39,30,77,0,66	2/2:0,0,3:3:38,38,38,8,8,0
+chr21	29712084	chr21:29712084:M	ACACACACACACACACACACACACACACACACACACACACA	<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,10,9:21:255,169,145,188,0,162	1/1:0,17,1:22:255,59,0,255,33,255	2/2:0,1,12:18:255,255,255,44,10,0
+chr21	29719075	chr21:29719075:M	TATATACATATATATATATATATATAT	<11.5>,<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,12,15:27:255,255,255,255,0,255	1/1:0,8,0:8:189,24,0,203,24,226	2/2:0,0,25:27:255,255,255,80,81,0
+chr21	29725008	chr21:29725008:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,4:15:26,0,149	0/1:9,4:14:36,0,110	0/1:12,6:19:58,0,150
+chr21	29734346	chr21:29734346:M	CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<9>,<11>,<12>	.	.	Motif=CTTTT	GT:AD:DP:PL	1/2:0,11,11,0:22:255,255,255,255,0,255,255,208,255,255	1/3:0,13,0,7:20:255,187,148,255,125,255,255,0,255,255	2/3:0,0,11,6:17:255,255,255,112,112,63,204,204,0,156
+chr21	29735847	chr21:29735847:M	AAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6:11:227,106,96,48,0,22	2/2:0,2,11:14:255,188,152,39,3,0	1/2:0,3,13:19:255,225,196,56,0,8
+chr21	29736205	chr21:29736205:M	ATTATGATTATGATTATGATTATGATTAT	<3.8>	.	.	Motif=ATTATG	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,40:41:255,120,0	1/1:0,38:38:255,112,0
+chr21	29750217	chr21:29750217:M	CTCCCTCCCTTCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTC	<13>,<16.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:0,3,7:14:202,171,164,39,0,61	1/2:0,2,3:6:92,72,68,25,0,46	1/2:0,6,10:20:255,246,230,78,0,130
+chr21	29765858	chr21:29765858:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:34:0,102,255	0/1:13,12:26:255,0,255	0/0:40,0:40:0,120,255
+chr21	29767865	chr21:29767865:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19,1:20:255,60,0,255,40,255	1/2:0,19,13:33:255,247,149,255,0,237	1/1:0,23,0:23:255,69,0,255,68,255
+chr21	29774447	chr21:29774447:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,5:9:133,58,79,35,0,28	1/2:1,4,3:8:131,26,39,51,0,46	0/2:2,0,6:10:81,80,144,0,38,22
+chr21	29775276	chr21:29775276:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:7:0,3,81	0/1:2,3:5:35,0,18	0/0:4,0:6:0,11,68
+chr21	29779336	chr21:29779336:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGCACGTGTGTGTGTG	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,24:27:255,71,0	1/1:0,17:25:255,59,0	1/1:0,25:29:255,75,0
+chr21	29779495	chr21:29779495:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,38:39:255,115,0	0/1:12,17:33:248,0,119	1/1:1,41:43:255,108,0
+chr21	29782087	chr21:29782087:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,0:18:0,52,255	0/0:12,1:13:0,21,189	0/1:11,4:16:33,0,149
+chr21	29785562	chr21:29785562:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:6:0,1,68	1/1:0,5:6:92,17,0	0/0:4,0:5:0,14,76
+chr21	29796976	chr21:29796976:M	AAAAAAAAAAAAGAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,38:39:255,96,0	1/1:1,32:33:255,79,0	1/1:1,37:39:255,96,0
+chr21	29799497	chr21:29799497:M	TTTGTTTGTTTGTTTGTTTTCATTTGTTTTTTGTTTGTTTGTTTGTTTTTTG	<12>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,19:20:255,59,0	0/1:14,12:26:140,0,177	1/1:0,21:21:255,62,0
+chr21	29810297	chr21:29810297:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28,1:29:255,84,0,255,67,255	1/2:0,20,15:36:255,223,160,255,0,255	1/1:0,39,0:39:255,117,0,255,115,255
+chr21	29813914	chr21:29813914:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,89	0/1:9,8:18:93,0,101	0/0:12,0:12:0,35,210
+chr21	29814091	chr21:29814091:M	ATAAAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/0:19,1:21:0,37,226	0/1:11,5:17:25,0,96	0/1:12,4:18:18,0,106
+chr21	29821058	chr21:29821058:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11:24:132,0,169	0/1:20,11:34:105,0,255	1/1:1,22:26:255,47,0
+chr21	29827976	chr21:29827976:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,11:23:202,0,167	0/1:13,11:25:183,0,224	0/0:21,0:25:0,74,255
+chr21	29828012	chr21:29828012:M	TGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,9:27:51,0,141	0/1:15,9:25:54,0,120	0/0:31,0:32:0,89,255
+chr21	29830308	chr21:29830308:M	CACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACA	<28>,<30>,<31>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,9,1,6:17:255,116,162,255,89,255,255,0,255,255	1/3:0,2,0,5:7:139,85,144,133,85,130,68,0,62,53	2/3:0,0,6,4:10:229,241,255,59,71,41,105,105,0,76
+chr21	29839041	chr21:29839041:M	TTTCTTTTCTTTTCTTTTCTTTTTTTT	<6.4>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:16,25:41:255,0,187	0/1:18,7:25:53,0,252	0/0:32,0:32:0,94,255
+chr21	29847930	chr21:29847930:M	CACACACACACA	<8>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,17:41:255,0,255	0/0:23,1:24:0,48,255	0/1:22,14:38:250,0,255
+chr21	29848049	chr21:29848049:M	TTATTATTATTATTATTATTA	<8>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:16,13:29:166,0,224	0/0:30,0:30:0,88,255	0/1:17,10:27:109,0,241
+chr21	29848756	chr21:29848756:M	TATATATATATATATATATATATAT	<15.5>,<16.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,1,5:14:101,37,164,0,130,133	1/1:0,1,0:1:26,3,0,13,3,11	0/1:7,4,0:11:67,0,154,42,168,202
+chr21	29848780	chr21:29848780:M	TTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,5:14:255,154,132,140,0,115	1/2:0,3,0:6:103,18,6,79,0,76	1/2:0,1,3:7:146,99,89,40,0,26
+chr21	29851057	chr21:29851057:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:37:166,0,255	0/0:22,3:28:0,17,255	0/1:17,17:36:228,0,206
+chr21	29859378	chr21:29859378:M	ATAAAATAAAATGAAATAAAAAAACAAAAAAAAATAAA	<7.8>	.	.	Motif=ATAAA	GT:AD:DP:PL	0/1:11,15:26:82,0,42	0/0:12,0:14:0,35,129	0/1:16,13:30:52,0,90
+chr21	29861308	chr21:29861308:M	TCTTTTTTTTTCTTTT	<3.4>	.	.	Motif=TCTTT	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,30:30:255,90,0	1/1:0,34:34:255,102,0
+chr21	29868026	chr21:29868026:M	AAGGAAGGAAGGAAGGAAGGAAGGGAAGGA	<5.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/0:40,0:40:0,120,255	0/1:22,21:43:255,0,255
+chr21	29871761	chr21:29871761:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3,0:10:153,41,25,77,0,79,145,44,104,199	2/3:0,0,4,4:8:210,169,156,66,66,43,66,55,0,43	0/1:3,5,1,0:9:70,0,25,54,34,129,84,49,147,204
+chr21	29872193	chr21:29872193:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:9:64,0,46	1/1:2,8:12:122,0,0	0/0:6,0:6:0,18,106
+chr21	29875002	chr21:29875002:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,30:34:255,45,0	1/1:0,30:33:255,96,0	1/1:1,34:38:255,71,0
+chr21	29876113	chr21:29876113:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,19,11:31:255,193,106,255,0,255	2/2:0,2,25:27:255,255,255,80,45,0	1/2:0,9,8:17:255,139,90,157,0,109
+chr21	29888133	chr21:29888133:M	CCCTCCCTCCCTCCCTCCCTCC	<33.8>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:11,4:15:5,0,255	0/1:11,4:15:4,0,253	0/0:14,4:18:0,5,255
+chr21	29900084	chr21:29900084:M	AAAAAAAAAAAAAAAAGAAAATAAAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,16:20:255,22,0	1/1:0,21:24:255,69,0	1/1:1,17:22:255,43,0
+chr21	29926106	chr21:29926106:M	AAAAAAAAAAAAAAAA	<13>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,16,10:27:255,162,219,255,0,255	1/2:2,25,12:40:255,172,255,255,0,255	1/1:0,42,0:46:255,135,0,255,135,255
+chr21	29937798	chr21:29937798:M	TTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,15:35:255,255,255,255,0,255	1/2:0,18,26:48:255,255,255,255,0,255	2/2:0,0,23:25:255,255,255,75,75,0
+chr21	29944864	chr21:29944864:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,12:15:183,9,0	1/1:1,20:21:255,45,0	1/1:4,19:25:255,5,0
+chr21	29948120	chr21:29948120:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:42:255,123,0	1/1:1,28:29:255,68,0	1/1:1,35:36:255,88,0
+chr21	29953362	chr21:29953362:M	AAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:114,20,0	0/1:3,4:7:45,0,29	1/1:0,5:7:86,11,0
+chr21	29954739	chr21:29954739:M	TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:1,0,21:22:255,255,255,46,63,0	2/2:2,0,30:32:255,255,255,59,90,0	1/2:0,15,10:25:255,178,210,255,0,255
+chr21	29962870	chr21:29962870:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:10:39,0,61	0/1:2,3:6:34,0,18	0/1:3,5:13:60,0,47
+chr21	29969361	chr21:29969361:M	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<9.5>	.	.	Motif=ATAA	GT:AD:DP:PL	0/1:13,12:25:158,0,177	0/1:6,11:17:149,0,59	0/1:8,12:21:173,0,89
+chr21	29971487	chr21:29971487:M	ATCATCATCAT	<2.7>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,47:47:255,139,0	1/1:0,55:55:255,162,0	1/1:0,46:46:255,136,0
+chr21	29978464	chr21:29978464:M	ATATATATATATATATATA	<12.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,14,0:18:255,36,0,255,53,255	1/1:0,6,0:8:229,24,0,225,24,223	1/2:0,8,3:12:255,104,77,255,0,255
+chr21	29990798	chr21:29990798:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,56:56:255,166,0	1/1:1,42:43:255,109,0	1/1:1,39:40:255,99,0
+chr21	30000683	chr21:30000683:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,89,0	1/1:1,35:37:255,91,0	1/1:2,29:31:255,55,0
+chr21	30006879	chr21:30006879:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:49,1:53:0,137,255	0/0:39,0:40:0,117,255	0/1:10,19:31:255,0,103
+chr21	30008818	chr21:30008818:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:88,15,0	1/1:0,4:5:56,3,0	1/1:1,5:6:69,0,0
+chr21	30009965	chr21:30009965:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,3:38:0,47,255	0/0:31,1:33:0,79,255	0/1:13,14:28:178,0,150
+chr21	30010152	chr21:30010152:M	AAAAAAAAAAAAAAAAAGAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:24:255,71,0	1/1:0,29:34:255,95,0	1/1:0,16:17:255,48,0
+chr21	30017215	chr21:30017215:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:45,0,18	0/1:1,1:3:8,0,20	0/1:2,8:10:108,0,5
+chr21	30020817	chr21:30020817:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:36:255,103,0	1/1:0,21:22:255,64,0	1/1:0,44:45:255,132,0
+chr21	30032208	chr21:30032208:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:1,22:24:255,43,0	1/1:3,29:32:255,40,0
+chr21	30037106	chr21:30037106:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:34:255,96,0	1/1:0,26:29:255,83,0	1/1:0,41:45:255,128,0
+chr21	30038266	chr21:30038266:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,1,2:4:65,16,34,0,10,18	1/2:0,3,1:5:120,16,1,57,0,44	0/2:1,1,4:7:124,57,67,0,9,8
+chr21	30045691	chr21:30045691:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:0,40:41:255,120,0	1/1:0,42:44:255,129,0
+chr21	30046812	chr21:30046812:M	TGTGTATGGGTATGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGT	<9.5>,<10.5>	.	.	Motif=TGTGTA	GT:AD:DP:PL	1/1:0,20,0:20:255,59,0,255,59,255	1/2:0,7,7:14:255,126,86,107,0,86	1/1:0,23,1:24:255,71,0,255,52,255
+chr21	30058533	chr21:30058533:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:16:0,46,255	0/0:19,3:27:0,6,255	0/1:13,7:23:56,0,187
+chr21	30062279	chr21:30062279:M	AAAAATAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAA	<62>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:15:159,0,188	0/1:5,3:8:64,0,122	0/0:7,0:8:0,21,204
+chr21	30088691	chr21:30088691:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:30:0,87,255	0/0:31,0:34:0,96,255	0/1:13,10:25:105,0,179
+chr21	30103334	chr21:30103334:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,3:30:0,26,255	0/1:21,10:33:88,0,255	0/0:40,1:43:0,108,255
+chr21	30106442	chr21:30106442:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:86,19,0	1/1:0,3:3:38,8,0	0/1:1,1:4:23,0,2
+chr21	30128143	chr21:30128143:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,1:14:0,2,156	0/1:5,3:10:42,0,56	0/0:6,1:8:0,6,97
+chr21	30174970	chr21:30174970:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:28:255,27,0	1/1:5,28:36:255,20,0	1/1:3,27:31:255,38,0
+chr21	30191980	chr21:30191980:M	TCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTTGCTCTCTCTCTTTCTCCTCTC	<32>	.	.	Motif=TC	GT:AD:DP:PL	0/1:10,8:20:172,0,215	0/1:10,5:15:91,0,227	0/1:8,7:16:149,0,175
+chr21	30205795	chr21:30205795:M	TTTTTCTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,10:21:128,0,119	0/1:10,12:23:148,0,103	0/1:10,12:25:157,0,114
+chr21	30217900	chr21:30217900:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<29>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7,0:8:106,6,0,128,24,219	1/2:0,3,3:8:139,90,78,58,0,75	1/1:0,4,0:6:93,17,0,104,17,138
+chr21	30219685	chr21:30219685:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,32,186	0/1:5,9:14:112,0,44	0/0:17,0:19:0,53,255
+chr21	30226492	chr21:30226492:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:3:81,9,0	.
+chr21	30231682	chr21:30231682:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,2:43:0,89,255	0/1:15,18:33:224,0,171	0/0:25,1:26:0,58,255
+chr21	30235160	chr21:30235160:M	TTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:41:0,121,255	0/0:30,0:37:0,108,255	0/1:10,13:26:255,0,218
+chr21	30237551	chr21:30237551:M	TTTCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTCT	<12>,<12.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/0:13,0,0:13:0,39,255,39,255,254	0/1:6,5,0:11:113,0,144,131,108,223	0/2:3,0,9:13:132,168,255,0,66,31
+chr21	30241248	chr21:30241248:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:21,17:38:255,0,255	0/0:35,0:35:0,105,255
+chr21	30254274	chr21:30254274:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:20:0,57,255	0/1:14,15:33:255,0,255	0/0:17,0:21:0,53,255
+chr21	30268072	chr21:30268072:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:6:71,0,0	0/1:2,6:9:77,0,10	1/1:0,2:2:34,6,0
+chr21	30271040	chr21:30271040:M	AAACAAAACAAAAACAACAACAACAACAAAAAAAAA	<5.8>	.	.	Motif=AAACAA	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:13,20:33:255,0,180	0/0:32,0:32:0,95,255
+chr21	30279336	chr21:30279336:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,54:54:255,255,255,160,160,0	1/2:0,28,33:61:255,255,255,255,0,255	2/2:0,1,52:53:255,255,255,156,138,0
+chr21	30279861	chr21:30279861:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,4:16:18,0,148	0/1:9,2:13:8,0,106	0/0:15,2:17:0,17,208
+chr21	30280874	chr21:30280874:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:19:0,19,253	0/1:15,8:25:85,0,184	0/0:21,0:25:0,69,255
+chr21	30292509	chr21:30292509:M	AAAAAAATAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/1:14,19:33:240,0,152	0/0:36,1:37:0,91,255
+chr21	30297067	chr21:30297067:M	TGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGCGTGTGTGTGTGT	<31.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:3,6:9:78,0,26	0/0:14,0:14:0,41,252
+chr21	30304472	chr21:30304472:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:15:0,44,254	0/1:11,9:22:89,0,133	0/0:11,0:13:0,35,199
+chr21	30313592	chr21:30313592:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:157,15,0	0/1:11,8:20:75,0,135	1/1:0,15:15:255,44,0
+chr21	30322393	chr21:30322393:M	GTGTGTGTGTG	<7.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:15,0:17:0,51,255	0/1:4,8:13:146,0,66	0/0:13,0:13:0,39,255
+chr21	30322403	chr21:30322403:M	GGGGGGGGGGGGGCGGTGGGGGGG	<23>,<25>	.	.	Motif=G	GT:AD:DP:PL	0/2:4,0,5:9:44,69,152,0,45,30	1/2:0,7,3:11:105,38,41,92,0,140	1/2:0,1,3:5:43,40,62,13,0,12
+chr21	30333520	chr21:30333520:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,20,197	1/1:0,6:7:103,18,0	0/0:8,0:10:0,26,149
+chr21	30334488	chr21:30334488:M	ATAGATAGATAGATGATAGATGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<15.5>,<15.8>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:5,14,0:19:255,0,87,190,127,255	1/2:0,11,7:18:255,98,45,152,0,100	0/1:8,10,0:18:230,0,174,135,205,255
+chr21	30334616	chr21:30334616:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/1:10,6:17:131,0,249	0/0:25,0:27:0,81,255
+chr21	30337984	chr21:30337984:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:35:0,79,255	0/1:14,7:22:58,0,178	0/0:36,0:39:0,113,255
+chr21	30341737	chr21:30341737:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:35:122,0,255	1/1:4,21:26:255,7,0	0/1:23,7:31:33,0,255
+chr21	30346402	chr21:30346402:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/1:13,12:25:140,0,157	0/0:23,0:23:0,68,255
+chr21	30347297	chr21:30347297:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:39:0,77,255	0/1:22,16:42:179,0,255	0/0:40,0:44:0,128,255
+chr21	30351716	chr21:30351716:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTA	<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:17,0:18:0,50,255	0/1:8,9:17:114,0,95	0/0:22,0:22:0,65,255
+chr21	30356359	chr21:30356359:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:33:0,96,255	0/1:23,15:38:147,0,255	0/0:34,0:34:0,100,255
+chr21	30362723	chr21:30362723:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:27:209,0,125	1/1:1,29:32:255,76,0	0/1:14,19:34:246,0,163
+chr21	30367276	chr21:30367276:M	TTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:31:0,92,255	0/1:8,12:22:255,0,166	0/0:22,0:24:0,71,255
+chr21	30367585	chr21:30367585:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,41:41:255,121,0	1/1:0,26:26:255,77,0
+chr21	30388523	chr21:30388523:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,30:31:255,73,0	1/1:1,40:41:255,102,0
+chr21	30388644	chr21:30388644:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,12:15:255,42,0	1/1:0,15:16:255,48,0
+chr21	30390184	chr21:30390184:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:95,6,0	1/1:0,2:2:33,6,0	0/1:0,1:3:19,0,3
+chr21	30393447	chr21:30393447:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,66,0	1/1:1,30:39:255,74,0	1/1:0,34:38:255,102,0
+chr21	30394202	chr21:30394202:M	TTTTTTTTTTTTTTTTTTTTTTTT	<18>,<25>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:32,38,59,6,6,0	0/2:3,0,3:6:29,46,153,0,47,29	1/2:0,5,2:9:181,31,31,155,0,149
+chr21	30394756	chr21:30394756:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,43:44:255,129,0	1/1:1,41:43:255,108,0
+chr21	30403976	chr21:30403976:M	TTTTTCGTTTTCTTTTTCTTTTTTTTT	<4.7>	.	.	Motif=TTTTTC	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,30:30:255,90,0	1/1:0,20:20:255,60,0
+chr21	30404948	chr21:30404948:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:8:95,5,0	1/1:0,6:6:102,18,0	1/1:0,8:8:140,23,0
+chr21	30405493	chr21:30405493:M	TTTATTTTTATTATTTATTTTTATTTTTTATTTTTATTTTT	<4.7>	.	.	Motif=TTTATT	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,27:27:255,81,0	1/1:0,36:36:255,108,0
+chr21	30410757	chr21:30410757:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,11:13:191,20,0	1/1:0,5:7:108,20,0	1/1:1,19:22:255,44,0
+chr21	30411772	chr21:30411772:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:25:148,0,139	0/0:28,2:32:0,54,255	0/1:14,14:29:157,0,172
+chr21	30420803	chr21:30420803:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:4,0,107	0/1:3,3:6:31,0,32	0/1:5,7:13:79,0,55
+chr21	30449424	chr21:30449424:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<25>	.	.	Motif=CT	GT:AD:DP:PL	0/0:5,0:8:0,20,109	0/0:1,0:1:0,3,17	0/1:1,5:8:64,0,7
+chr21	30452826	chr21:30452826:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:32:255,56,0	0/1:15,20:39:152,0,88	1/1:1,42:51:255,51,0
+chr21	30461491	chr21:30461491:M	AAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,11:14:255,255,255,41,41,0	1/2:1,11,5:17:255,109,91,168,0,255	2/2:0,0,12:13:255,255,255,39,39,0
+chr21	30466481	chr21:30466481:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<20.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:2,0,9,11:22:255,255,255,255,255,255,122,255,0,246	1/3:0,16,0,7:24:255,195,144,255,195,255,255,0,255,255	2/3:2,0,5,7:14:224,244,255,158,193,172,51,159,0,138
+chr21	30482218	chr21:30482218:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,17,19:38:255,255,255,252,0,218	0/2:22,1,11:36:224,182,255,0,255,255	0/1:9,36,0:46:255,0,40,255,170,255
+chr21	30483959	chr21:30483959:M	TATATATATATATATGTATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	0/0:16,0:16:0,46,255	0/1:5,12:17:138,0,29	0/0:28,0:28:0,81,255
+chr21	30483978	chr21:30483978:M	AGAGAGAGAGAGAGAGAGA	<12.5>,<14.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,15,13:30:255,255,255,255,0,255	0/2:13,1,9:24:195,201,255,0,255,255	1/2:0,13,9:23:255,242,195,255,0,255
+chr21	30489116	chr21:30489116:M	ACACATACACACACACACACACACACACACAC	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:13,12:26:139,0,156	1/1:0,25:25:255,74,0
+chr21	30492859	chr21:30492859:M	TTTTCTTTTCTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25,0:25:255,75,0,255,74,255	1/2:0,13,14:28:255,208,167,238,0,161	1/1:0,26,2:28:255,78,0,255,46,255
+chr21	30494709	chr21:30494709:M	AAAAAAAAAAAAAAGAAAAAAAAAAGAAAAGAAAAGAAAA	<35>,<39>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6,0:6:172,18,0,172,18,172	1/2:2,9,6:17:255,67,140,194,0,204	1/1:0,9,0:10:255,30,0,255,30,255
+chr21	30498212	chr21:30498212:M	GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,16,0:18:255,51,0,255,51,255	1/2:0,8,9:19:255,232,198,219,0,184	1/1:0,23,0:23:255,69,0,255,69,255
+chr21	30507160	chr21:30507160:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,49:50:255,129,0	0/1:23,27:52:255,0,255	1/1:0,42:42:255,124,0
+chr21	30522235	chr21:30522235:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:12,1:13:0,23,140	0/0:8,1:9:0,12,87	0/1:7,6:13:40,0,52
+chr21	30522251	chr21:30522251:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:104,12,0	0/1:4,2:6:33,0,85	0/1:1,7:8:154,0,2
+chr21	30522265	chr21:30522265:M	ATATATATATATATACATATATATATATA	<17.5>,<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,12:23:255,166,98,111,0,42	1/2:0,1,2:3:105,24,15,12,0,3	1/2:0,8,6:18:255,113,63,97,0,44
+chr21	30524108	chr21:30524108:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,97,0	0/1:19,23:42:255,0,214	1/1:1,43:44:255,111,0
+chr21	30524233	chr21:30524233:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:4,22:27:255,9,0	1/1:3,33:38:255,47,0
+chr21	30533037	chr21:30533037:M	GTTTTGTTTTTGTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<12.2>,<13.2>	.	.	Motif=GTTTT	GT:AD:DP:PL	1/2:0,5,6:11:238,114,84,83,0,65	0/2:9,0,6:16:128,107,230,0,162,215	1/1:0,9,0:9:171,27,0,171,27,171
+chr21	30552729	chr21:30552729:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<29.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:7:32,0,49	0/1:6,3:10:21,0,81	0/1:3,5:9:60,0,35
+chr21	30558067	chr21:30558067:M	TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:70,12,0	0/1:2,7:10:91,0,7	1/1:0,6:6:102,18,0
+chr21	30562374	chr21:30562374:M	TATATATATATATATATGTATATATATATATATACATGTATGTATGTATATATA	<33.8>	.	.	Motif=TATA	GT:AD:DP:PL	1/1:0,3:7:44,9,0	.	0/0:0,0:2:0,0,0
+chr21	30576984	chr21:30576984:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,40:40:255,118,0	1/1:0,40:40:255,118,0
+chr21	30621612	chr21:30621612:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:30:255,60,0	1/1:3,23:28:255,30,0	0/1:8,26:35:255,0,40
+chr21	30623886	chr21:30623886:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:213,24,0	1/1:0,7:9:220,27,0	1/1:0,2:3:67,9,0
+chr21	30626625	chr21:30626625:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:31:255,54,0	1/1:2,26:29:255,50,0	1/1:0,22:23:255,67,0
+chr21	30632675	chr21:30632675:M	AAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:69,9,0	1/1:0,5:6:157,18,0	1/1:0,1:1:29,3,0
+chr21	30650305	chr21:30650305:M	TTTTTTTTTCTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:242,27,0	1/1:0,12:12:255,36,0	1/1:0,13:14:255,39,0
+chr21	30656424	chr21:30656424:M	AAAAAAAAAAAAAAAAAGAAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:17:255,49,0	1/1:1,14:16:221,27,0	1/1:0,20:20:255,59,0
+chr21	30683970	chr21:30683970:M	AAAAAAAAAAGAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,2:23:0,3,255	1/1:0,6:7:158,18,0	0/1:13,4:17:57,0,255
+chr21	30690894	chr21:30690894:M	AAAAAAAAATGAAAAGAAAAGAAAA	<4.8>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:20,19:39:255,0,255	1/1:0,36:36:255,108,0	0/1:18,20:38:255,0,255
+chr21	30695589	chr21:30695589:M	CAAACAAACAAACAAACAAAC	<6.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:20,23:43:255,0,255	1/1:1,32:33:255,79,0	0/1:14,15:29:197,0,178
+chr21	30701769	chr21:30701769:M	TGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGT	<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,9,0:19:200,0,227,163,255,255	1/2:0,9,6:15:255,104,61,156,0,114	0/1:20,7,0:30:116,0,255,130,255,255
+chr21	30705468	chr21:30705468:M	GTTTTTTGTTTGTTTTTTGTTTGTTT	<5.5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:19,19:38:226,0,226	1/1:0,40:40:255,117,0	0/1:22,18:42:196,0,255
+chr21	30707314	chr21:30707314:M	AAAACAAAACAAAACAAA	<4.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:17,21:38:255,0,217	1/1:0,39:39:255,115,0	0/1:16,15:31:191,0,210
+chr21	30713016	chr21:30713016:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:23:255,0,182	1/1:0,34:35:255,105,0	0/1:9,15:25:255,0,166
+chr21	30715751	chr21:30715751:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,1:7:0,2,80	1/1:0,7:7:118,20,0	0/1:3,1:4:5,0,40
+chr21	30716787	chr21:30716787:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,20,177	0/1:9,3:14:10,0,130	0/1:8,3:11:20,0,106
+chr21	30717762	chr21:30717762:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,9,0:23:196,0,255,163,255,255	1/2:0,12,11:23:255,191,125,208,0,142	0/1:9,13,0:25:255,0,207,244,250,255
+chr21	30725133	chr21:30725133:M	ACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:20,0:24:0,63,255	0/1:14,11:38:203,0,255	0/0:28,0:28:0,84,255
+chr21	30727925	chr21:30727925:M	AAGAAGAAAAGAGAGAAGAAG	<6.3>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:21,20:41:255,0,255	1/1:0,40:40:255,120,0	0/1:17,23:40:255,0,255
+chr21	30731863	chr21:30731863:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,23:47:255,0,255	1/1:0,49:49:255,144,0	0/1:25,31:56:255,0,255
+chr21	30752614	chr21:30752614:M	ACACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:9,0:10:0,30,255	0/1:11,6:22:108,0,255	0/0:7,0:9:0,26,228
+chr21	30755257	chr21:30755257:M	CCACAGCCATACCCACAGCCATAGCCAGTTCCATAGCCACAGCCACAGCCAGAGCCAGAGCCATAGCCACAGCCACAGCCGGAGCCATAGCCACAG	<14>	.	.	Motif=CCACAG	GT:AD:DP:PL	1/1:0,4:4:101,12,0	1/1:0,1:1:25,3,0	1/1:0,5:5:125,15,0
+chr21	30763383	chr21:30763383:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:27:127,136,255,0,218,169	0/1:8,16,1:27:255,0,186,255,131,255	0/2:6,2,8:17:119,67,222,0,55,55
+chr21	30767367	chr21:30767367:M	ACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:2,16:18:254,17,0	1/1:2,23:25:255,39,0	1/1:2,16:18:248,17,0
+chr21	30768842	chr21:30768842:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,21:27:255,39,0	1/1:1,18:21:255,44,0	1/1:2,16:19:252,20,0
+chr21	30799212	chr21:30799212:M	AAAAAAAAAAAAAAAAAAAAGAATAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:6:110,15,0	1/1:0,1:2:27,3,0	1/1:0,2:3:55,6,0
+chr21	30800786	chr21:30800786:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,7:7:127,21,0	1/1:0,19:19:255,56,0
+chr21	30803046	chr21:30803046:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,63,0	1/1:0,17:17:255,51,0	1/1:0,10:14:255,33,0
+chr21	30805071	chr21:30805071:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:14:173,4,0	1/1:2,15:18:235,17,0	1/1:0,13:13:233,38,0
+chr21	30806882	chr21:30806882:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,12:34:125,0,255	1/1:2,26:29:255,50,0	0/1:24,11:36:95,0,255
+chr21	30807296	chr21:30807296:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,5,39:44:255,255,255,131,39,0	1/2:0,17,17:36:255,255,210,255,0,188	2/2:0,2,33:36:255,255,255,105,59,0
+chr21	30813491	chr21:30813491:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:169,0,226	0/1:20,17:37:191,0,244	0/1:15,15:30:185,0,185
+chr21	30816279	chr21:30816279:M	CACACACACACACACACACACACACACACACACACACACACACACACA	<21>,<22>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,5,4,0:11:248,64,33,99,0,71,210,53,98,195	1/3:0,9,0,5:17:255,76,88,210,74,183,236,0,146,213	2/2:0,2,17,1:20:255,255,249,57,26,0,255,230,42,255
+chr21	30818841	chr21:30818841:M	AAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20,1:44:255,0,255,255,255,255	0/2:19,0,14:36:255,243,255,0,255,255	0/1:21,6,2:31:99,0,255,70,255,255
+chr21	30820551	chr21:30820551:M	TGGTGGTGGTGCTGGTGGTGATGGTGGTGGTGTTGGT	<13.3>	.	.	Motif=TGG	GT:AD:DP:PL	0/1:11,24:35:184,0,33	0/1:10,13:23:86,0,52	0/1:10,9:19:52,0,64
+chr21	30821072	chr21:30821072:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,27:46:255,0,206	0/1:16,18:34:223,0,187	0/1:23,17:41:195,0,255
+chr21	30824991	chr21:30824991:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,8:20:255,145,169,218,0,255	1/2:2,11,6:20:221,73,116,168,0,255	1/2:0,11,7:19:255,131,152,195,0,255
+chr21	30826652	chr21:30826652:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGATGATAGATACATAGATACATACATAGGTAGATAGATGATAGA	<16.8>,<17.8>	.	.	Motif=GATA	GT:AD:DP:PL	1/2:0,1,1:3:72,12,3,18,0,10	1/1:0,3,0:4:113,9,0,39,7,29	1/2:0,1,3:6:152,33,16,27,0,11
+chr21	30834204	chr21:30834204:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<10.2>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,21:21:255,63,0	1/1:0,15:15:255,45,0
+chr21	30835514	chr21:30835514:M	GAATGAATGAATGAATGAATGAATGAATGAAATGAATGAAT	<12.2>,<13.2>	.	.	Motif=GAAT	GT:AD:DP:PL	1/2:0,11,11:22:255,211,150,211,0,149	1/2:0,9,13:22:255,235,173,163,0,100	2/2:0,0,21:21:255,255,255,63,62,0
+chr21	30841846	chr21:30841846:M	AAAAAAAAAAAAAAAAATTAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:12:182,0,1	1/1:0,1:3:27,3,0	1/1:0,3:7:82,9,0
+chr21	30841882	chr21:30841882:M	AACAACAACAACAACAA	<7.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,20:23:255,30,0	1/1:0,7:8:176,5,0	1/1:1,17:19:255,30,0
+chr21	30842198	chr21:30842198:M	AAAAAAAAAAAACCAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:20:255,40,0	1/1:0,17:17:255,50,0	1/1:1,21:23:255,50,0
+chr21	30847416	chr21:30847416:M	AAAAAAAAAAAATAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:2,28:31:255,55,0	1/1:0,40:40:255,118,0
+chr21	30849697	chr21:30849697:M	CACACACACACACACGCGCGCGCGCACACACACACACACACAC	<23.5>,<33.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,6:8:210,210,210,24,24,0	1/2:0,10,1:14:255,45,15,255,0,255	2/2:0,0,4:5:139,139,139,15,15,0
+chr21	30851142	chr21:30851142:M	ATATATATATATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:6:61,12,0	0/0:0,0:3:0,3,8	.
+chr21	30851163	chr21:30851163:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:78,2,0	1/1:0,1:2:33,5,0	0/1:0,2:3:45,0,3
+chr21	30866162	chr21:30866162:M	ACACACACACACACACACACACACACACACACACACACACA	<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,35,0:36:255,108,0,255,108,255	1/2:0,14,8:23:255,142,177,255,0,255	1/1:0,28,0:29:255,87,0,255,87,255
+chr21	30867730	chr21:30867730:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,8:13:195,97,110,51,0,31	1/2:0,1,1:6:49,14,8,26,0,19	1/2:0,1,1:2:38,14,11,16,0,11
+chr21	30869146	chr21:30869146:M	ATATATATACATATATGTGTATATATATATATATATATATATATAT	<21>,<22>	.	.	Motif=AT	GT:AD:DP:PL	0/2:4,0,5:14:65,77,184,0,72,46	0/0:2,0,0:4:0,11,81,11,62,56	1/2:0,5,6:12:246,90,75,90,0,58
+chr21	30869384	chr21:30869384:M	TGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,3:6:160,38,20,38,0,20	0/0:0,0,0:1:0,3,10,3,12,15	2/2:0,0,2:2:60,30,24,6,6,0
+chr21	30869398	chr21:30869398:M	TATATATATATATATATATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:5:53,13,0	.	1/1:0,1:1:11,3,0
+chr21	30870909	chr21:30870909:M	ACACACACACACACACACACACACACACACAC	<17>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22,1:24:255,68,0,255,41,255	1/2:0,14,13:32:255,255,255,233,0,255	1/1:3,32,3:38:255,54,0,255,30,255
+chr21	30871225	chr21:30871225:M	AAAAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:153,16,0	1/1:0,3:5:102,12,0	1/1:0,1:3:55,9,0
+chr21	30872688	chr21:30872688:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,13:15:255,255,229,42,26,0	2/2:0,1,9:10:254,165,138,27,12,0	1/2:3,10,9:22:255,105,96,97,0,145
+chr21	30876230	chr21:30876230:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:227,40,0	0/1:7,9:16:104,0,71	1/1:2,11:13:156,4,0
+chr21	30879280	chr21:30879280:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:5,33:39:255,13,0	1/1:4,28:36:255,24,0	1/1:0,31:31:255,91,0
+chr21	30888116	chr21:30888116:M	CACACACACACACACACACACACAC	<9.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:25,0:26:0,65,255	0/1:21,17:39:255,0,255	0/0:30,0:32:0,96,255
+chr21	30921538	chr21:30921538:M	AAAAAAAAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,0:36:0,103,255	0/1:22,19:42:221,0,255	0/0:35,1:36:0,88,255
+chr21	30935715	chr21:30935715:M	GGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:8,10:18:128,0,92	1/1:2,11:13:155,4,0	0/1:10,15:25:192,0,104
+chr21	30943175	chr21:30943175:M	TATAAATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,17:17:255,50,0	1/1:0,27:27:255,80,0
+chr21	30957610	chr21:30957610:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:16:255,47,0	1/1:0,21:21:255,63,0	1/1:0,26:32:255,84,0
+chr21	30958092	chr21:30958092:M	ACACACACACACACACACACACACACACACACACACACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:26:255,77,0	1/1:0,19:20:255,60,0	1/1:0,22:26:255,77,0
+chr21	30958483	chr21:30958483:M	GTGTGTGTGTGTGTGTGTGTGTGTTTGTG	<17.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,14:28:255,255,255,255,0,255	1/1:0,33,0:35:255,93,0,255,103,255	1/2:0,11,2:13:255,54,19,255,0,255
+chr21	30959343	chr21:30959343:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:0,5:6:140,15,0	1/1:0,3:4:86,9,0
+chr21	30959443	chr21:30959443:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,87,0	1/1:2,29:33:255,61,0	1/1:4,39:44:255,57,0
+chr21	30968763	chr21:30968763:M	AAAAAAAAAACAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,66,0	1/1:0,27:28:255,82,0	1/1:1,19:21:255,44,0
+chr21	30968939	chr21:30968939:M	GAAAGAGAGAGAGAAAGAAGGAAAGAAAGGAAGGAAAGAA	<7>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:13,3:19:55,0,243	0/0:8,1:10:0,1,156	0/1:9,4:14:62,0,166
+chr21	30974558	chr21:30974558:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:1,29:32:255,76,0	1/1:2,30:32:255,58,0
+chr21	30974987	chr21:30974987:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,17:21:255,7,0	1/1:3,17:22:255,12,0	1/1:1,12:14:193,20,0
+chr21	30977846	chr21:30977846:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:7:89,3,0	1/1:0,3:4:60,11,0	1/1:0,7:7:123,21,0
+chr21	30987664	chr21:30987664:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:8:56,0,28	1/1:0,6:8:120,23,0	0/1:7,3:11:18,0,96
+chr21	30993252	chr21:30993252:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,38:41:255,72,0	1/1:0,34:34:255,102,0	1/1:0,33:33:255,99,0
+chr21	30993277	chr21:30993277:M	TATATATATGTGTATATATAT	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:42,14:59:114,0,255	0/1:20,17:37:209,0,255	0/1:34,14:48:123,0,255
+chr21	30993334	chr21:30993334:M	ACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,25:29:255,56,0	1/1:4,37:42:255,33,0	1/1:1,30:36:255,70,0
+chr21	30999071	chr21:30999071:M	TTTTATTTTATCGTATTTTATTTTATTTTATTTTATTTTA	<9>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:15,8:23:86,0,222	0/1:15,13:28:153,0,190	0/1:11,13:24:173,0,136
+chr21	31009121	chr21:31009121:M	TTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:83,9,0	1/1:0,3:4:81,9,0	1/1:0,2:2:68,6,0
+chr21	31010336	chr21:31010336:M	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	<6.8>	.	.	Motif=AGGA	GT:AD:DP:PL	1/1:0,0:1:0,0,0	1/1:0,6:6:74,17,0	1/1:0,2:4:45,11,0
+chr21	31011348	chr21:31011348:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:206,35,0	1/1:2,18:20:255,25,0	1/1:2,14:17:219,15,0
+chr21	31029267	chr21:31029267:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:11,0,53	0/1:2,4:7:47,0,24	0/0:14,1:16:0,29,234
+chr21	31029387	chr21:31029387:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,21:32:255,0,112	0/1:16,15:31:175,0,192	0/0:29,2:31:0,55,255
+chr21	31029688	chr21:31029688:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:171,17,0	1/1:0,26:28:255,81,0	1/1:1,23:25:255,55,0
+chr21	31042646	chr21:31042646:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,17:36:255,0,255	0/1:14,9:25:147,0,244	1/1:3,25:31:255,16,0
+chr21	31046279	chr21:31046279:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:124,21,0	1/1:0,7:9:119,21,0	1/1:0,11:12:201,35,0
+chr21	31050234	chr21:31050234:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:6:131,61,46,27,0,11	1/2:0,2,3:6:146,58,43,33,0,16	1/2:0,3,0:5:104,19,9,50,0,36
+chr21	31054015	chr21:31054015:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:30:255,51,0	1/1:0,14:18:255,45,0	1/1:0,15:16:255,45,0
+chr21	31055973	chr21:31055973:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,2,20:22:255,255,255,66,29,0	1/2:0,7,10:20:255,175,118,134,0,78	1/2:0,13,11:24:255,192,123,226,0,158
+chr21	31061692	chr21:31061692:M	AAAAAAAAAAAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:18:238,33,0	0/1:8,10:22:102,0,71	1/1:1,18:20:255,39,0
+chr21	31064059	chr21:31064059:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:15:255,44,0	1/1:0,4:6:128,17,0	1/1:0,13:14:255,42,0
+chr21	31069176	chr21:31069176:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	.	0/1:9,3:12:11,0,103	0/0:0,0:1:0,0,0
+chr21	31073487	chr21:31073487:M	AAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,55,0:55:255,165,0,255,165,255	1/2:0,24,15:40:255,255,255,255,0,255	1/1:0,49,0:52:255,153,0,255,150,255
+chr21	31074222	chr21:31074222:M	CACAAACACACACACACACACACACACACACACACACAAACACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,16,1:21:255,61,0,255,42,255	1/2:0,9,7:16:255,116,69,149,0,102	1/1:0,22,0:23:255,67,0,255,65,255
+chr21	31077721	chr21:31077721:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:25:0,55,255	0/1:7,9:19:120,0,75	0/0:22,0:26:0,73,255
+chr21	31082605	chr21:31082605:M	AAAAAAAAAAAAAAGAAAAGAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,8:20:88,0,162	0/1:10,12:23:145,0,109	0/0:18,2:20:0,23,255
+chr21	31086494	chr21:31086494:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<24.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,1:1:35,3,0	1/1:0,3:6:108,9,0	0/0:0,0:2:0,3,21
+chr21	31089047	chr21:31089047:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,6:21:57,0,194	0/1:18,6:27:37,0,253	0/0:16,3:20:0,5,241
+chr21	31089419	chr21:31089419:M	TATATATATAT	<7>,<7.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,4:8:173,37,14,37,0,14	0/2:0,1,1:3:30,0,9,0,6,12	1/1:0,3,1:4:83,12,0,28,1,16
+chr21	31089429	chr21:31089429:M	TTTTTTTTTATTTATTTTTTTTTTTT	<25>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,10,14:27:255,255,255,92,0,255	1/2:0,5,12:17:255,255,255,63,0,104	0/2:5,0,21:28:255,255,255,0,66,39
+chr21	31091878	chr21:31091878:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:5:15,0,32	0/1:2,1:5:17,0,22	0/1:6,3:9:26,0,78
+chr21	31097880	chr21:31097880:M	TTTTTTTTATTTTTTTTTATTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,7:23:67,0,240	0/1:10,18:28:243,0,99	0/0:33,0:33:0,97,255
+chr21	31112362	chr21:31112362:M	TATATATATATATATATATATATATA	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4:7:170,17,0	0/0:0,0:2:0,3,17	0/0:6,0:8:0,24,223
+chr21	31112387	chr21:31112387:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:6,2:9:0,5,39	0/0:2,0:3:0,6,18	0/1:9,4:14:7,0,40
+chr21	31119471	chr21:31119471:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:1,37:41:255,99,0	0/1:14,27:43:255,0,132
+chr21	31119812	chr21:31119812:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,35:38:255,56,0	1/1:3,37:41:255,57,0	0/1:35,16:52:151,0,255
+chr21	31127413	chr21:31127413:M	TTTTTTTTTTTTTTTTTCTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:20:86,0,150	0/1:6,14:22:187,0,50	0/1:10,5:17:47,0,139
+chr21	31135651	chr21:31135651:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,82,0	0/1:13,16:30:195,0,152	0/1:16,16:32:198,0,198
+chr21	31142631	chr21:31142631:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAAGAAAAAGAAAAAGAAAAAAAA	<47>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:10:181,0,24	1/1:0,10:10:255,30,0	0/0:7,0:7:0,21,184
+chr21	31143440	chr21:31143440:M	TATATATAATTTTTATATATATATATA	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:11,10:21:116,0,134	0/0:34,0:34:0,100,255
+chr21	31144831	chr21:31144831:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,8:9:123,9,0	1/1:0,4:4:67,12,0	0/0:1,0:1:0,3,17
+chr21	31146711	chr21:31146711:M	AAAAAAAAAAAAAATGAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,18:22:255,10,0	1/1:3,17:20:239,7,0	0/1:7,9:16:112,0,77
+chr21	31148951	chr21:31148951:M	TTTTTCTTTTTCTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,23:30:255,0,36	0/1:8,25:33:255,0,107	0/1:21,26:47:255,0,255
+chr21	31152022	chr21:31152022:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,1:5:119,26,14,91,0,86	1/2:0,3,2:7:159,55,39,92,0,81	1/2:0,0,3:6:129,89,78,23,0,9
+chr21	31153713	chr21:31153713:M	ATATATATATATATATA	<6.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:26,21,0:47:255,0,255,255,255,255	1/2:1,17,9:27:255,143,212,255,0,255	0/2:21,0,21:42:255,255,255,0,255,255
+chr21	31154062	chr21:31154062:M	AAAAAAACAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:32:176,0,252	0/1:18,20:38:251,0,214	0/0:36,0:37:0,109,255
+chr21	31161036	chr21:31161036:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:20:255,60,0,255,60,255	1/1:0,13,1:19:255,27,0,255,1,255	1/2:0,7,6:15:255,158,151,191,0,173
+chr21	31173503	chr21:31173503:M	AAAGCAAGAAAGAAAGAGAGAGCGAGAGAAAGAGAGAGAGAGAGAGAGAGAAAAGAAAAGAAAGAAAGAAAG	<19>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:6,4:10:44,0,81	0/1:7,2:9:9,0,96	0/0:9,0:9:0,26,163
+chr21	31179547	chr21:31179547:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,1:41:0,101,255	0/1:15,9:27:98,0,193	0/0:38,2:43:0,89,255
+chr21	31179903	chr21:31179903:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,18,144	0/1:1,6:7:140,0,6	0/0:5,0:6:0,15,135
+chr21	31180522	chr21:31180522:M	TTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:36:0,107,255	0/1:18,21:41:255,0,255	0/0:34,0:34:0,102,255
+chr21	31181738	chr21:31181738:M	CTTCTTCTTCTTCTTCTTCTT	<6.3>,<7.3>	.	.	Motif=CTT	GT:AD:DP:PL	0/1:7,4,0:11:71,0,150,58,98,128	0/2:5,0,4:9:31,47,164,0,71,46	1/1:0,7,0:7:181,21,0,123,20,105
+chr21	31183697	chr21:31183697:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,2:29:0,48,255	0/0:21,0:23:0,67,255	0/1:10,5:15:44,0,133
+chr21	31196299	chr21:31196299:M	TTTTCTTTTCTTTTTTCTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:16,0:16:0,47,255	0/1:10,8:20:86,0,141
+chr21	31199533	chr21:31199533:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:25:0,55,255	0/1:9,12:23:160,0,89	0/0:19,2:22:0,28,255
+chr21	31199911	chr21:31199911:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,2:35:0,66,255	0/0:34,3:41:0,67,255	0/1:17,16:34:183,0,210
+chr21	31202389	chr21:31202389:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:12,20:34:251,0,130	0/0:29,0:31:0,90,255
+chr21	31215562	chr21:31215562:M	AAAAAAGAAAAAAAAAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:9,0,20	0/1:1,3:5:47,0,2	0/0:5,0:8:0,21,110
+chr21	31222677	chr21:31222677:M	ATATATATATATATATATATATATATATATAT	<16.5>,<18.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:6,2,3:11:38,36,44,0,17,138	0/0:2,0,0:4:0,5,14,9,23,69	1/2:0,3,1:6:15,7,5,7,0,67
+chr21	31225657	chr21:31225657:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:31:0,55,255	0/1:13,11:26:120,0,154	0/0:26,1:27:0,62,255
+chr21	31226953	chr21:31226953:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:2:0,6,53	0/1:1,3:5:76,0,12	0/0:2,0:2:0,6,53
+chr21	31228078	chr21:31228078:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,3:25:0,15,255	0/1:7,11:19:146,0,66	0/0:17,3:21:0,7,255
+chr21	31228221	chr21:31228221:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,4:7:39,5,0	.	.
+chr21	31232014	chr21:31232014:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,73,255	0/1:16,17:34:200,0,193	0/0:34,0:36:0,105,255
+chr21	31242861	chr21:31242861:M	AAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:3,0,51	0/0:0,0:2:0,3,12	1/1:0,3:3:52,9,0
+chr21	31243193	chr21:31243193:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:10:44,0,46	0/1:2,0:4:14,0,18	1/1:0,8:9:118,23,0
+chr21	31256589	chr21:31256589:M	ACACACACACACACACACACACACACACACACACACACAC	<24>,<25>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6,1:7:175,21,0,104,3,85	1/2:0,9,7:18:255,113,62,161,0,114	1/1:0,4,0:4:110,12,0,77,12,67
+chr21	31258814	chr21:31258814:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,4:17:255,63,24,237,0,191	1/2:0,6,13:19:255,190,172,104,0,50	1/1:0,32,0:33:255,99,0,255,97,255
+chr21	31259124	chr21:31259124:M	TTCTTTTTTTTTTTCCTTTTTCTTTTT	<4.7>	.	.	Motif=TTCTTT	GT:AD:DP:PL	1/1:0,14:14:255,42,0	.	1/1:2,25:27:255,40,0
+chr21	31259625	chr21:31259625:M	AATAAAATAATAATAATAATAATAATAATAAT	<12.7>,<13.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:16,14,0:30:255,0,255,255,255,255	1/2:0,6,3:10:249,64,36,107,0,80	0/0:29,0,0:29:0,87,255,87,255,255
+chr21	31260244	chr21:31260244:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:6,5:12:54,0,81	0/0:23,1:24:0,52,255
+chr21	31260676	chr21:31260676:M	AGAAAAAGAAAGATAAAGAGAAAAGAAAAAAAAAA	<6>	.	.	Motif=AGAAAA	GT:AD:DP:PL	0/1:15,9:24:105,0,226	0/1:17,15:34:200,0,243	1/1:1,16:18:255,27,0
+chr21	31261263	chr21:31261263:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13:34:255,0,255	1/1:1,15:17:255,21,0	0/0:20,0:21:0,63,255
+chr21	31262935	chr21:31262935:M	AAAAAAAAAGAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:21,24:46:255,0,255	0/0:53,0:55:0,159,255
+chr21	31267517	chr21:31267517:M	TTTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:21,0,12:35:114,209,255,0,255,255	1/2:1,24,4:34:255,56,39,255,0,255	0/0:27,1,0:32:0,56,255,90,255,255
+chr21	31269672	chr21:31269672:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,1:8:0,7,96	0/1:4,8:13:97,0,24	0/1:11,3:15:4,0,141
+chr21	31275127	chr21:31275127:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:23:0,49,255	0/1:16,12:30:133,0,201	0/0:18,1:23:0,48,255
+chr21	31281086	chr21:31281086:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:9:73,0,24	0/0:4,1:6:0,1,59	0/1:4,4:11:54,0,37
+chr21	31283538	chr21:31283538:M	TTTATTTATTTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/0:36,0:36:0,106,255	0/1:18,19:37:250,0,230
+chr21	31290647	chr21:31290647:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:59,59,59,6,6,0	1/1:0,3,0:4:109,12,0,109,12,109	0/2:1,0,5:8:153,154,181,0,29,8
+chr21	31298736	chr21:31298736:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,8,0:25:150,0,255,130,255,255	0/2:15,3,9:30:208,92,255,0,255,255	0/1:10,12,1:25:255,0,209,175,241,255
+chr21	31301842	chr21:31301842:M	AAATAAATAGATAAATAGATAAATAAATAAATAAA	<9.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:6,7:14:76,0,64	0/1:2,1:4:5,0,26	0/1:12,6:19:43,0,145
+chr21	31305417	chr21:31305417:M	AAAAATAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:30:203,0,167	0/1:13,18:31:220,0,134	0/1:9,17:27:234,0,82
+chr21	31311151	chr21:31311151:M	GTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTTTGT	<8.5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:14,10:24:153,0,241	0/1:17,13:31:203,0,255	0/1:16,17:33:255,0,255
+chr21	31321335	chr21:31321335:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.2>	.	.	Motif=TGTT	GT:AD:DP:PL	0/1:9,21:30:255,0,161	0/1:12,12:24:255,0,255	0/1:14,17:32:255,0,255
+chr21	31325287	chr21:31325287:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,10:27:197,0,255	0/1:15,19:34:255,0,255	0/1:18,16:35:255,0,255
+chr21	31327644	chr21:31327644:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:10:5,0,100	0/1:3,4:8:42,0,36	1/1:1,4:6:58,0,0
+chr21	31334290	chr21:31334290:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,23:25:255,72,0	0/1:14,8:23:88,0,186
+chr21	31335706	chr21:31335706:M	AAAAAAAAAGAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:31:0,90,255	0/0:25,0:27:0,75,255	0/1:17,9:28:160,0,255
+chr21	31336489	chr21:31336489:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:2,0,55	0/1:6,4:10:37,0,70	0/1:3,4:9:62,0,25
+chr21	31337501	chr21:31337501:M	TTATTATTATTATTGTTGTTATTATTATTATTATTATTATTATTATT	<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/0:13,0:14:0,38,211	0/1:22,11:34:88,0,255
+chr21	31352546	chr21:31352546:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:18:37,0,146	0/1:7,6:13:64,0,81	0/0:24,1:27:0,61,255
+chr21	31355174	chr21:31355174:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,22,178	0/1:4,11:18:141,0,14	0/1:5,2:8:12,0,59
+chr21	31355525	chr21:31355525:M	TTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<9.2>,<12.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:7,8,0:15:226,0,159,252,133,255	1/2:0,8,3:11:255,55,66,237,0,236	0/2:9,0,6:15:71,115,255,0,168,126
+chr21	31359806	chr21:31359806:M	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGAA	<16.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:4,4:9:82,0,82	0/1:3,9:13:200,0,43	0/1:2,8:11:177,0,23
+chr21	31361838	chr21:31361838:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<10>,<12>	.	.	Motif=TAGA	GT:AD:DP:PL	0/2:16,0,17:33:213,255,255,0,247,195	0/1:16,27,0:43:255,0,151,255,232,255	0/2:10,0,13:23:165,229,255,0,149,110
+chr21	31362446	chr21:31362446:M	ATTATTATTATTATTATTATTATTATTATTATTAT	<13.7>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,8:22:155,0,255	0/0:8,0:9:0,24,219	1/1:0,9:9:248,27,0
+chr21	31366086	chr21:31366086:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,3,11	0/1:2,3:5:67,0,40	0/1:1,1:2:22,0,22
+chr21	31377184	chr21:31377184:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,15:30:255,255,185,255,0,176	1/2:0,11,9:22:255,154,91,206,0,148	2/2:0,2,14:16:255,255,214,47,12,0
+chr21	31384402	chr21:31384402:M	AAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5,1:14:59,0,102,57,123,255	0/2:4,2,4:13:105,56,104,0,48,95	0/2:7,2,2:14:24,5,111,0,107,190
+chr21	31385718	chr21:31385718:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,4:26:0,2,255	0/1:14,4:18:17,0,192	0/1:12,11:24:129,0,157
+chr21	31387196	chr21:31387196:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:146,15,0	1/1:0,7:8:210,22,0	0/0:1,0:1:0,3,29
+chr21	31388213	chr21:31388213:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<16>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:5,0,16:23:255,189,255,0,142,96	1/2:0,15,12:29:255,150,64,187,0,102	0/0:4,0,0:5:0,12,121,12,121,121
+chr21	31388480	chr21:31388480:M	AAAATAAATGAAATAAAATAAAATAAAATAAA	<7.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:11,9:20:104,0,140	0/1:14,11:25:132,0,188
+chr21	31392571	chr21:31392571:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:166,17,0	0/1:2,7:10:96,0,5	0/1:2,3:5:37,0,19
+chr21	31392959	chr21:31392959:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:30:192,0,179	1/1:2,22:26:255,41,0	0/0:19,2:24:0,33,255
+chr21	31394688	chr21:31394688:M	TCTCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTC	<12>,<22>,<24>,<25>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,0,3,6,0:11:173,197,255,105,109,78,30,58,0,26,96,149,55,53,121	2/4:3,0,5,3,5:18:189,220,255,132,165,122,42,160,24,111,25,189,0,101,149	1/3:0,6,0,6,0:16:255,147,146,251,102,237,151,0,151,134,203,52,200,148,186
+chr21	31394729	chr21:31394729:M	CACACACACACACACACACACACACACACACACACACACACACACAC	<19.5>,<21.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,3,3:12:160,142,172,81,101,89,83,77,0,102	0/3:3,0,0,3:8:90,102,187,102,171,165,0,79,64,63	1/2:0,8,5,0:22:255,112,61,245,0,197,255,123,245,255
+chr21	31395238	chr21:31395238:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:33:185,0,242	0/1:16,19:35:234,0,181	0/0:30,1:34:0,71,255
+chr21	31406181	chr21:31406181:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/0:29,2:31:0,56,255	0/1:17,9:26:84,0,228
+chr21	31409108	chr21:31409108:M	TTTTCTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/0:12,0:13:0,39,255	0/1:4,13:19:255,0,69
+chr21	31410087	chr21:31410087:M	GTGTGTGTGTGTGTGTGAGGTTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:31,0:33:0,96,255	0/1:17,7:24:59,0,246
+chr21	31410487	chr21:31410487:M	GTGTGTGTGATAGTGTGTATGTGTATGTG	<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,24:24:255,71,0	1/1:0,34:34:255,100,0
+chr21	31411472	chr21:31411472:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:11:15,0,100	0/1:3,5:9:68,0,24	0/1:2,5:11:74,0,24
+chr21	31412785	chr21:31412785:M	AAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,3,13	0/0:2,0:3:0,9,74	0/1:2,11:17:255,0,26
+chr21	31423701	chr21:31423701:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,4,32	0/0:1,0:2:0,3,31	1/1:0,19:19:255,57,0
+chr21	31428883	chr21:31428883:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:26:0,55,255	0/0:15,2:22:0,18,255	0/1:13,12:27:158,0,155
+chr21	31428893	chr21:31428893:M	AAAAGTAAAAGTAAA	<1.8>	.	.	Motif=AAAAGT	GT:AD:DP:PL	0/0:26,2:28:0,40,255	0/1:20,7:27:71,0,255	0/1:31,6:37:19,0,255
+chr21	31430211	chr21:31430211:M	AAAAAAAAAAAAAAAA	<11>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,19:24:178,241,255,21,67,0	2/2:0,0,3:7:72,73,130,18,15,0	0/1:1,5,2:12:121,0,91,106,5,128
+chr21	31430226	chr21:31430226:M	ATATATATATATATATATATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,0:16:1,0,102	0/0:5,0:6:0,16,71	1/1:3,6:16:106,7,0
+chr21	31430274	chr21:31430274:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/0:31,0:32:0,86,255	0/0:17,0:17:0,46,190	0/1:9,14:25:115,0,34
+chr21	31438180	chr21:31438180:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,14	0/0:0,0:1:0,3,17	1/1:0,13:14:255,42,0
+chr21	31441886	chr21:31441886:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,45,0	1/1:1,13:17:255,19,0	0/1:20,5:27:68,0,255
+chr21	31442071	chr21:31442071:M	ATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:4:47,11,0	.	0/0:17,0:17:0,51,255
+chr21	31445017	chr21:31445017:M	AGAACAGAAGAGAAGAGAAAAGAAAGAACAGAA	<7.8>	.	.	Motif=AGAAC	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,19:19:255,57,0	1/1:0,28:28:255,84,0
+chr21	31448610	chr21:31448610:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:21:220,0,13	0/1:8,8:18:98,0,89	0/1:7,9:16:113,0,78
+chr21	31451710	chr21:31451710:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<23>,<24>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,10,8:18:255,134,83,168,0,117	2/2:0,3,16:19:255,255,211,56,7,0	1/2:0,9,10:19:255,164,111,149,0,94
+chr21	31453691	chr21:31453691:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<8.5>,<9.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,25,0:25:255,75,0,255,74,255	1/2:0,5,3:8:210,54,31,90,0,68	1/2:0,11,10:21:255,186,127,205,0,146
+chr21	31455280	chr21:31455280:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,2,2:6:50,5,31,11,0,20	1/2:0,3,2:5:99,28,19,49,0,35	2/2:0,0,3:3:51,51,51,9,9,0
+chr21	31455417	chr21:31455417:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:143,0,217	1/1:0,29:29:255,85,0	0/1:14,13:28:165,0,174
+chr21	31462730	chr21:31462730:M	TTTTTTGTTTTTTTTTTTTGTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,24:25:255,56,0	1/1:0,9:10:163,29,0	1/1:1,16:19:255,37,0
+chr21	31463813	chr21:31463813:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:19:134,0,90	0/0:22,0:23:0,67,255	0/1:15,10:28:104,0,205
+chr21	31464846	chr21:31464846:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,6:15:117,0,173	1/1:0,7:9:196,24,0	0/1:9,3:14:43,0,205
+chr21	31465576	chr21:31465576:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:20:119,0,128	1/1:2,16:18:247,18,0	0/1:17,9:26:88,0,233
+chr21	31468086	chr21:31468086:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,12:23:158,0,116	1/1:0,25:25:255,73,0	0/1:10,9:19:105,0,122
+chr21	31469080	chr21:31469080:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:9:92,46,74,53,0,90	1/1:0,5,0:8:107,20,0,122,21,168	0/1:3,4,2:10:52,0,45,44,9,115
+chr21	31470002	chr21:31470002:M	TTTTTTTTTTTTTTTTTT	<14>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,9:19:255,164,200,247,0,220	1/1:0,24,0:25:255,75,0,255,75,255	1/2:1,13,8:22:255,125,177,255,0,255
+chr21	31471871	chr21:31471871:M	AATAATAATAATAATAATAATAATAATAATAA	<9.3>,<11.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/2:0,18,16:34:255,255,255,255,0,255	1/1:0,32,0:32:255,96,0,255,96,255	1/2:0,19,9:28:255,168,184,255,0,255
+chr21	31474547	chr21:31474547:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,11:21:247,0,184	1/1:0,34:36:255,102,0	0/1:7,15:24:255,0,121
+chr21	31475026	chr21:31475026:M	TTATTATTATTATTATTATTATTATTATTATTATTATT	<13.3>,<16.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,11,8:20:255,236,204,255,0,255	1/1:0,4,0:5:99,9,0,110,15,138	1/2:0,0,4:6:139,119,113,20,0,8
+chr21	31477475	chr21:31477475:M	TTTTTTTTTTTTTTTTTT	<15>,<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,10,2:13:255,229,211,53,62,32,255,176,0,255	1/2:0,14,10,0:25:255,170,110,235,0,165,255,181,237,255	2/3:0,0,9,5:15:255,255,255,127,132,103,236,165,0,237
+chr21	31482061	chr21:31482061:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<15>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,23,21:46:255,255,255,255,0,255	1/1:0,31,0:34:255,99,0,255,99,255	1/2:0,12,27:39:255,255,255,255,0,238
+chr21	31487538	chr21:31487538:M	TTTTTTTTTTTTTTGTATTTTTTTTTTTTTT	<29>,<30>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:181,181,181,29,29,0	1/2:0,2,4:6:105,57,51,34,0,17	1/2:0,3,3:6:119,45,36,52,0,36
+chr21	31489007	chr21:31489007:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,13:40:128,0,255	1/1:0,33:33:255,97,0	0/1:17,24:42:255,0,190
+chr21	31489495	chr21:31489495:M	GAGGGAGGGAGACAGGGAGGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGA	<13.8>	.	.	Motif=GAGG	GT:AD:DP:PL	0/0:8,0:9:0,24,102	0/1:7,4:11:15,0,49	0/0:6,0:7:0,19,79
+chr21	31489572	chr21:31489572:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	1/1:2,19:21:255,24,0	1/1:0,17:17:255,50,0	1/1:1,24:25:255,55,0
+chr21	31491150	chr21:31491150:M	AAGGAAGGGAAGGAAGGGAAGGAAGGAAGGA	<10>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:10,10:20:223,0,221	1/1:0,28:28:255,84,0	0/1:14,10:24:217,0,255
+chr21	31492042	chr21:31492042:M	TATGTGTGTATATATATATGTGATGTGTGTATATATGTATGTAT	<11.5>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:14,19:37:109,0,66	1/1:0,26:31:255,57,0	0/1:17,12:30:49,0,101
+chr21	31496460	chr21:31496460:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,3:12:255,51,17,129,0,102	1/1:0,4,1:6:142,17,0,77,1,62	1/1:0,2,0:3:73,9,0,52,9,46
+chr21	31499869	chr21:31499869:M	AAAACAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:31:255,91,0	1/1:0,28:31:255,86,0	1/1:0,36:36:255,105,0
+chr21	31500167	chr21:31500167:M	AAAATAAAATAAAATAAATAAAA	<4.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:31,0:31:0,93,255	0/1:15,19:34:255,0,239
+chr21	31506011	chr21:31506011:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,3:8:161,44,29,80,0,59	1/1:0,9,0:10:255,28,0,176,27,151	1/1:0,5,0:7:156,19,0,112,18,98
+chr21	31506262	chr21:31506262:M	ACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,12:25:255,225,152,245,0,172	1/1:0,33,0:38:255,113,0,255,111,255	1/2:0,17,15:32:255,255,182,255,0,219
+chr21	31508388	chr21:31508388:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:19:123,0,106	0/1:7,2:10:5,0,101	0/1:4,12:16:164,0,23
+chr21	31510815	chr21:31510815:M	AAAAAAAAAAAAACAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:24:255,53,0	1/1:3,32:35:255,50,0	1/1:2,30:34:255,63,0
+chr21	31519509	chr21:31519509:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:8:94,5,0	1/1:0,5:5:84,15,0	0/1:1,2:5:27,0,7
+chr21	31521737	chr21:31521737:M	CACACACAAACACACACACACACACACACACACACACACACA	<23>,<25>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,4,8:13:255,214,196,108,0,82	2/2:0,0,14:14:255,255,255,42,42,0	1/2:0,6,8:16:255,207,183,158,0,138
+chr21	31524017	chr21:31524017:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:30:116,0,255	0/0:29,1:31:0,73,255	0/1:12,14:27:176,0,150
+chr21	31525368	chr21:31525368:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,35,243	0/1:14,5:19:29,0,183	0/0:20,0:21:0,61,255
+chr21	31526034	chr21:31526034:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:162,14,0	1/1:0,6:7:114,20,0	1/1:0,8:10:161,29,0
+chr21	31528829	chr21:31528829:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:41:255,121,0	1/1:0,43:44:255,129,0	1/1:0,48:49:255,144,0
+chr21	31531761	chr21:31531761:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,21:34:255,0,105	0/0:35,2:38:0,76,255	1/1:3,33:39:255,59,0
+chr21	31537443	chr21:31537443:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,19:27:255,0,134	0/0:14,0:20:0,39,255	1/1:0,20:22:255,63,0
+chr21	31539271	chr21:31539271:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:196,0,205	1/1:1,21:22:255,47,0	0/0:26,0:27:0,79,255
+chr21	31540386	chr21:31540386:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:16:0,46,255	0/1:10,4:16:21,0,141	0/0:25,1:27:0,62,255
+chr21	31542427	chr21:31542427:M	AAAAAAAAAGAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:138,0,157	0/0:20,0:20:0,59,255	1/1:3,32:35:255,49,0
+chr21	31546188	chr21:31546188:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,19:37:255,255,255,255,0,191	1/1:0,24,0:24:255,72,0,255,71,255	2/2:0,0,28:28:255,255,255,83,83,0
+chr21	31546557	chr21:31546557:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<6.8>,<9.8>,<10.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/3:0,8,0,7:17:255,204,175,255,131,255,172,0,255,238	1/1:0,22,0,0:28:255,81,0,255,83,255,255,83,255,255	2/3:0,0,15,16:31:255,255,255,255,255,203,255,255,0,185
+chr21	31548133	chr21:31548133:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:6:103,0,12	1/1:0,0:2:15,3,0	1/1:0,4:5:142,13,0
+chr21	31548482	chr21:31548482:M	TTGTTGTTGTT	<4>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:12,2:14:0,17,85	1/1:1,3:4:17,1,0	0/0:30,0:31:0,72,253
+chr21	31552049	chr21:31552049:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	1/1:0,3:3:90,9,0	0/0:0,0:1:0,3,11
+chr21	31555187	chr21:31555187:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,15:32:185,0,218	1/1:0,35:35:255,103,0	0/0:31,0:33:0,94,255
+chr21	31556536	chr21:31556536:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,28:54:255,0,255	0/0:38,1:39:0,97,255	1/1:1,50:51:255,132,0
+chr21	31562564	chr21:31562564:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,20:21:255,63,0	1/1:0,19:22:255,65,0
+chr21	31564537	chr21:31564537:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,2,4:9:83,46,101,35,0,57	0/1:3,3,0:8:67,0,64,83,54,143	0/2:2,0,2:4:23,34,103,0,34,22
+chr21	31565032	chr21:31565032:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:12:55,0,89	0/0:15,1:17:0,22,227	1/1:1,16:19:255,37,0
+chr21	31566411	chr21:31566411:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,20:26:255,37,0	1/1:0,14:16:222,45,0	1/1:1,15:22:234,39,0
+chr21	31567031	chr21:31567031:M	TCTCTGTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:21,21:42:255,0,255	0/0:31,1:32:0,69,255	1/1:0,29:30:255,90,0
+chr21	31567529	chr21:31567529:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,7:33:43,0,255	1/1:0,24:26:255,63,0	0/0:39,0:40:0,117,255
+chr21	31569074	chr21:31569074:M	TTTTAATTTTATTTTTTTTTTA	<3.8>	.	.	Motif=TTTTAT	GT:AD:DP:PL	0/1:22,13:35:185,0,255	1/1:2,29:31:255,47,0	0/0:32,1:33:0,78,255
+chr21	31570685	chr21:31570685:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:41:185,0,255	1/1:2,14:16:203,13,0	0/0:24,2:30:0,51,255
+chr21	31571656	chr21:31571656:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,9:19:176,0,176	1/1:0,14:15:255,32,0	0/0:10,0:12:0,30,254
+chr21	31571668	chr21:31571668:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:2:0,3,23	0/1:3,3:6:51,0,51	1/1:0,0:2:17,3,0
+chr21	31574170	chr21:31574170:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:5:28,0,13	1/1:1,9:11:122,15,0	0/1:2,1:5:1,0,37
+chr21	31574614	chr21:31574614:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:8:121,0,28	0/1:2,3:8:94,0,34	0/1:1,2:6:51,0,26
+chr21	31577048	chr21:31577048:M	AAAAACAAAAAACAAACAAACAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,241	1/1:1,30:31:255,73,0	0/0:35,0:35:0,103,255
+chr21	31579809	chr21:31579809:M	AAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:3:11,3,0	1/1:0,3:4:101,12,0	0/0:0,0:1:0,0,0
+chr21	31585776	chr21:31585776:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,10:15:255,148,133,77,0,37	1/2:2,3,7:13:142,65,104,24,0,23	2/2:1,2,9:12:161,113,131,17,0,0
+chr21	31585937	chr21:31585937:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:6:72,0,0	0/1:2,8:11:115,0,2	1/1:0,10:10:176,29,0
+chr21	31587279	chr21:31587279:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,41:42:255,106,0	1/1:0,50:50:255,147,0	1/1:1,36:37:255,91,0
+chr21	31587931	chr21:31587931:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:19:255,54,0	1/1:0,19:23:255,68,0	1/1:0,25:25:255,75,0
+chr21	31588097	chr21:31588097:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:101,18,6,53,0,42	1/2:0,3,1:4:101,17,5,50,0,39	1/2:0,1,3:4:100,52,41,17,0,6
+chr21	31590020	chr21:31590020:M	ACACACACACATACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,19:20:255,57,0	1/1:0,21:21:255,63,0	1/1:0,12:13:255,36,0
+chr21	31590832	chr21:31590832:M	GGGGTGGGGGGCGGGGGGGAGGGGGGGGG	<22>,<28>	.	.	Motif=G	GT:AD:DP:PL	0/1:5,3,0:8:60,0,117,75,91,153	0/2:6,0,7:13:85,121,255,0,103,67	1/1:0,11,0:11:255,33,0,255,33,255
+chr21	31591568	chr21:31591568:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,3:19:29,36,235,0,228,255	0/1:12,10,1:24:110,0,144,125,192,255	2/2:0,2,16:20:255,255,255,53,23,0
+chr21	31592291	chr21:31592291:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14,0:32:170,0,245,255,255,255	0/2:18,0,22:41:255,255,255,0,255,200	1/1:0,43,0:44:255,129,0,255,132,255
+chr21	31593928	chr21:31593928:M	TTTTTTTTTTTTTTTCTTTTTTTTTT	<23>,<27>,<28>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,7,5:14:197,227,255,52,88,47,69,140,0,104	1/2:0,14,6,0:21:255,99,130,255,0,255,255,99,255,255	3/3:0,0,0,10:10:255,255,255,198,199,171,30,30,29,0
+chr21	31595480	chr21:31595480:M	TTTTTTTTTCTTTTCTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,12:29:139,0,237	0/1:14,17:31:209,0,156	0/0:38,0:38:0,112,255
+chr21	31599363	chr21:31599363:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:5:22,0,8	0/1:1,4:8:50,0,11	0/0:0,0:2:0,0,0
+chr21	31601432	chr21:31601432:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,15:26:255,231,198,189,0,118	0/1:7,4,4:16:87,0,164,18,62,97	1/1:0,21,2:27:255,74,0,255,42,255
+chr21	31602226	chr21:31602226:M	AAAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,9,88	0/1:5,12:19:255,0,104	.
+chr21	31602592	chr21:31602592:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:23:0,49,255	0/0:11,1:13:0,20,179	0/1:12,7:21:82,0,150
+chr21	31603593	chr21:31603593:M	ACACACACACACACACACACACACACAC	<13>,<15>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,16,0,11:31:255,255,255,255,255,255,255,0,255,255	1/2:3,16,14,0:33:255,195,255,230,0,255,255,255,255,255	3/3:0,0,0,22:25:255,255,255,255,255,255,74,74,74,0
+chr21	31606993	chr21:31606993:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:26:168,0,168	0/0:28,2:31:0,55,255	1/1:1,36:37:255,91,0
+chr21	31607875	chr21:31607875:M	AAGAAAAAAAAAAAGAAATAAATAAAGAAAGAAAGAGAGAGATGGACAGAGAGAAAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAGAAAGA	<8.5>	.	.	Motif=AAGA	GT:AD:DP:PL	1/1:0,5:5:114,15,0	1/1:0,2:2:48,6,0	1/1:0,2:2:44,6,0
+chr21	31608132	chr21:31608132:M	TTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:10,8:19:83,0,117	0/0:25,0:27:0,73,255	1/1:0,24:24:255,70,0
+chr21	31612588	chr21:31612588:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:10:52,0,138	0/0:10,0:13:0,27,255	1/1:0,2:2:53,6,0
+chr21	31616857	chr21:31616857:M	TTTTTTCTTTTTATTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:247,0,255	0/1:16,13:29:255,0,255	1/1:0,24:24:255,72,0
+chr21	31618324	chr21:31618324:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,4:5:123,15,0	0/1:1,0:2:5,0,23
+chr21	31620706	chr21:31620706:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,2:19:0,20,255	0/0:23,2:25:0,39,255	0/1:11,4:16:23,0,163
+chr21	31622131	chr21:31622131:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATA	<9>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,2,4:11:163,83,66,41,0,24	2/2:0,0,0:1:0,0,0,0,0,0	1/2:0,4,1:6:159,22,4,88,0,71
+chr21	31629079	chr21:31629079:M	AAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,13:22:255,0,151	0/0:26,0:30:0,88,255	1/1:0,31:36:255,106,0
+chr21	31631721	chr21:31631721:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:0,29:30:255,88,0	1/1:0,28:28:255,82,0
+chr21	31632640	chr21:31632640:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:18:4,0,197	0/1:16,6:24:35,0,232	0/1:2,9:11:131,0,4
+chr21	31633645	chr21:31633645:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,21:36:255,0,176	0/1:23,27:50:255,0,255	1/1:1,45:47:255,120,0
+chr21	31634123	chr21:31634123:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14:16:255,42,0	1/1:0,18:21:255,48,0	1/1:0,15:18:255,45,0
+chr21	31634730	chr21:31634730:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2,0:3:49,0,19,34,25,53	0/2:1,0,3:4:74,49,65,0,24,15	1/1:0,5,1:6:169,18,0,86,1,69
+chr21	31634920	chr21:31634920:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,4,16:33:255,222,255,0,160,255	0/1:19,10,1:31:95,0,250,128,255,255	2/2:0,3,23:27:255,255,255,72,26,0
+chr21	31636513	chr21:31636513:M	TTTTTGTTTTGTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20:22:255,29,0	1/1:0,10:14:171,29,0	1/1:1,18:19:255,38,0
+chr21	31637234	chr21:31637234:M	TTATTATTTATTATTATTAATATTATTATTATT	<9>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:6,8:14:175,0,119	0/0:31,0:31:0,93,255
+chr21	31641109	chr21:31641109:M	TTTTTTTTTTGTTGTTTTTTTTTGTTTTGTTTTTTTTTT	<38>,<49>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:21:255,62,0,255,63,255	1/2:0,8,5:15:255,140,114,146,0,199	1/1:0,24,0:24:255,71,0,255,72,255
+chr21	31643999	chr21:31643999:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:7:47,0,30	0/1:1,2:4:21,0,16	1/1:1,6:8:93,7,0
+chr21	31650075	chr21:31650075:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:129,0,95	0/1:6,11:18:145,0,50	1/1:1,19:21:255,44,0
+chr21	31652835	chr21:31652835:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:51,2:54:0,122,255	0/1:6,14:21:191,0,43	0/0:45,2:49:0,108,255
+chr21	31652917	chr21:31652917:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:4:9,0,19	0/1:2,4:8:58,0,13	0/1:3,7:11:100,0,20
+chr21	31653960	chr21:31653960:M	AAAAAATAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:24,13:37:125,0,255	0/0:28,0:28:0,83,255
+chr21	31663120	chr21:31663120:M	TTTTTCTTTTTTTTTTTTT	<13>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,14,0:22:255,0,135,255,120,255	0/2:10,0,10:23:110,176,255,0,206,146	1/1:0,18,0:23:255,66,0,255,66,255
+chr21	31665971	chr21:31665971:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:17,0,23	0/1:7,2:9:6,0,88	1/1:0,6:7:100,18,0
+chr21	31670629	chr21:31670629:M	CACAGACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,21:43:255,0,255	0/0:41,1:43:0,106,255	1/1:0,51:51:255,150,0
+chr21	31671109	chr21:31671109:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,3,12:35:114,159,255,0,249,255	0/1:9,10,1:22:130,0,101,170,112,255	0/2:3,0,13:16:182,225,255,0,45,6
+chr21	31682377	chr21:31682377:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:26:107,0,198	0/0:30,1:33:0,79,255	1/1:1,31:35:255,84,0
+chr21	31683710	chr21:31683710:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/1:17,26:48:255,0,181	0/0:33,1:36:0,87,255
+chr21	31684992	chr21:31684992:M	GGGGGGGTGGGGGGGGGGTGGGG	<22>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,15:15:255,44,0	0/1:8,4:12:35,0,101	1/1:0,15:16:255,47,0
+chr21	31686204	chr21:31686204:M	AAAAAAAAAAAAAGAAAAAAAAAAAAAA	<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,9:14:117,132,255,0,87,47	0/1:3,10,0:14:239,0,41,170,48,185	2/2:1,0,10:12:155,150,171,15,24,0
+chr21	31689465	chr21:31689465:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,20:31:255,0,161	0/0:15,0:16:0,45,255	1/1:0,16:18:255,48,0
+chr21	31691673	chr21:31691673:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,1,7:19:91,121,255,0,119,119	1/1:3,18,0:24:255,18,0,255,62,255	0/2:5,1,17:24:240,255,255,0,57,28
+chr21	31699503	chr21:31699503:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,0:42:0,120,255	0/1:13,22:38:255,0,247	0/0:38,0:42:0,120,255
+chr21	31702509	chr21:31702509:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,0:45:0,133,255	0/1:18,11:29:114,0,236	0/0:52,1:53:0,137,255
+chr21	31704533	chr21:31704533:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:25,21:49:234,0,255	0/0:49,2:52:0,117,255
+chr21	31709351	chr21:31709351:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,5:30:51,0,255	0/0:30,0:32:0,96,255	1/1:0,6:10:178,5,0
+chr21	31709855	chr21:31709855:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,1:40:0,100,255	0/1:25,13:39:120,0,255	0/0:44,2:46:0,100,255
+chr21	31712223	chr21:31712223:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,25:26:255,255,255,58,75,0	1/2:2,10,10:23:255,140,223,148,0,230	2/2:3,0,16:19:230,255,255,3,48,0
+chr21	31712528	chr21:31712528:M	TTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,5:11:68,88,250,0,86,58	0/1:8,5,3:16:95,0,220,73,85,176	2/2:1,0,13:14:210,247,255,24,42,0
+chr21	31713747	chr21:31713747:M	GGGGTGGGGTGGGGGGGG	<3.8>	.	.	Motif=GGGGT	GT:AD:DP:PL	0/1:19,12:31:204,0,255	0/0:30,1:31:0,68,255	1/1:0,19:19:255,57,0
+chr21	31717827	chr21:31717827:M	ATATATATATATATATA	<13.5>,<14.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,4,3,0:23:140,0,255,20,255,255,179,255,255,255	0/3:10,0,0,5:18:14,52,255,52,255,255,0,255,255,255	1/2:0,11,9,0:21:255,104,41,134,0,73,255,104,134,255
+chr21	31723611	chr21:31723611:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,18:35:192,0,150	0/0:22,0:30:0,63,255	1/1:0,27:28:255,70,0
+chr21	31732180	chr21:31732180:M	GCCCCGCCCCCTCCCCGCCTCGTCCCGCCCTGCGCCGCCCTGCACCGCCCCGC	<10.8>	.	.	Motif=GCCCC	GT:AD:DP:PL	0/1:4,7:11:46,0,13	0/1:8,4:12:11,0,54	0/0:7,0:7:0,19,75
+chr21	31735264	chr21:31735264:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:3:30,3,0	.	1/1:0,6:8:187,24,0
+chr21	31737397	chr21:31737397:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:21:32,0,235	0/1:9,2:12:2,0,126	0/1:4,10:14:141,0,32
+chr21	31737562	chr21:31737562:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2,2:8:13,0,69,0,25,71	0/1:12,9,2:26:111,0,148,144,137,255	0/2:2,1,9:13:130,146,243,0,13,8
+chr21	31739170	chr21:31739170:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,2:26:0,39,255	0/1:19,18:43:238,0,214	0/0:49,1:51:0,124,255
+chr21	31739889	chr21:31739889:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:6:0,18,107	0/0:6,1:7:0,3,85	0/1:5,3:9:26,0,70
+chr21	31740692	chr21:31740692:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0,0:4:0,12,83,6,64,58	0/1:4,3,0:9:76,0,95,93,110,214	0/2:1,0,7:9:201,213,255,0,26,3
+chr21	31742780	chr21:31742780:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,12	1/1:0,2:4:30,4,0	0/1:1,3:5:38,0,14
+chr21	31745357	chr21:31745357:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:23:143,0,135	0/0:35,2:39:0,69,255	1/1:2,19:21:255,26,0
+chr21	31746683	chr21:31746683:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,10:16:255,174,150,45,0,38	2/2:0,0,11:11:255,223,193,33,32,0	1/1:2,15,2:19:255,19,0,211,19,255
+chr21	31746848	chr21:31746848:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:34,0,35	0/1:4,6:13:81,0,39	0/0:8,0:11:0,19,137
+chr21	31748867	chr21:31748867:M	TTTTCTTTTTCTTTTCTTTCCTTTTTTTTTTTTTTTTTTTT	<6.5>,<7.2>	.	.	Motif=TTTTCT	GT:AD:DP:PL	2/2:0,0,3:3:74,74,75,9,9,0	1/1:0,4,0:4:100,12,0,101,12,102	0/0:1,0,0:1:0,3,27,3,27,27
+chr21	31749973	chr21:31749973:M	AAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:30:180,0,255	0/1:15,7:25:114,0,255	1/1:0,14:15:255,42,0
+chr21	31750467	chr21:31750467:M	TTTTTTCTTTTCTTTTCTTTTCGTTTTTTTTTTTTTTTTTT	<40>,<42>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,13:14:242,255,255,41,42,0	1/2:1,4,2:9:84,19,32,70,0,110	2/2:1,0,19:21:255,255,255,44,60,0
+chr21	31751658	chr21:31751658:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,21,2:25:255,37,0,255,38,255	1/2:2,7,4:14:162,40,37,64,0,98	1/1:1,17,1:19:255,38,0,255,38,255
+chr21	31753782	chr21:31753782:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,16:19:255,255,255,78,0,29	1/2:1,5,15:22:255,228,255,129,0,93	1/1:0,6,0:6:178,18,0,174,18,171
+chr21	31753798	chr21:31753798:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,16:33:119,0,91	0/0:15,1:16:0,32,165	1/1:0,30:35:255,95,0
+chr21	31757605	chr21:31757605:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,8:13:94,109,231,0,81,44	0/1:3,5,2:11:117,0,59,53,20,72	2/2:2,0,14:16:195,201,248,14,46,0
+chr21	31761135	chr21:31761135:M	TCTCTCCCTCCCTCTCTCCCTCCCTCTCTCCCTCTTTCTCTTTCTCCCTCCCTTTCTCCCTTTCTCTCTCTCTCTCTTTCTCTCT	<19.2>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:2,2:5:24,0,25	0/1:6,3:9:27,0,83	0/1:3,2:7:21,0,40
+chr21	31762836	chr21:31762836:M	TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,34:35:255,103,0	1/1:0,26:26:255,77,0
+chr21	31770101	chr21:31770101:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:9:189,42,24,99,0,74	2/2:2,1,9:12:124,105,153,2,18,0	1/1:0,9,0:10:255,30,0,183,29,158
+chr21	31771013	chr21:31771013:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:22:255,54,0	0/1:1,6:12:163,0,24	1/1:0,22:25:255,74,0
+chr21	31772337	chr21:31772337:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,109,0	1/1:0,15:15:255,44,0	1/1:0,33:33:255,97,0
+chr21	31774025	chr21:31774025:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:26:0,66,255	0/1:13,14:28:166,0,140	0/0:21,0:21:0,62,255
+chr21	31776758	chr21:31776758:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,9,2,4:15:255,110,75,197,39,155,245,0,127,223	2/3:0,1,7,10:18:255,255,255,168,150,116,128,82,0,78	1/1:0,23,0,0:25:255,74,0,255,73,255,255,74,255,255
+chr21	31779996	chr21:31779996:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,17:30:238,248,255,0,189,126	0/1:9,10,1:26:252,0,206,183,156,255	2/2:0,0,22:23:255,255,255,65,57,0
+chr21	31782896	chr21:31782896:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,10,10:25:250,135,225,131,0,226	2/2:1,0,22:23:255,255,255,50,66,0	1/1:0,21,0:24:255,70,0,255,71,255
+chr21	31785883	chr21:31785883:M	CCACTACCACCACCACCACCACCACCA	<45>	.	.	Motif=CCA	GT:AD:DP:PL	0/0:23,6:32:0,20,255	0/1:21,9:30:21,0,255	0/0:36,8:47:0,42,255
+chr21	31787642	chr21:31787642:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,2,11:27:138,174,255,0,169,185	0/1:6,11,1:19:152,0,63,185,72,255	2/2:2,0,20:22:255,255,255,28,60,0
+chr21	31787807	chr21:31787807:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:15:0,43,253	0/1:6,3:10:24,0,77	0/0:11,1:12:0,18,176
+chr21	31788117	chr21:31788117:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,8:17:255,121,97,132,0,90	1/2:1,5,6:15:218,69,71,94,0,76	1/2:1,3,11:16:206,137,162,26,0,9
+chr21	31788880	chr21:31788880:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,19:19:255,56,0	0/1:11,10:21:106,0,124	1/1:0,22:22:255,64,0
+chr21	31796630	chr21:31796630:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,18,11:29:255,255,255,255,0,255	2/2:0,0,10:13:255,255,255,31,31,0	1/1:0,36,0:36:255,106,0,255,108,255
+chr21	31799675	chr21:31799675:M	ACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<18.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,1,11,16:28:255,255,255,255,255,204,206,148,0,126	1/2:0,18,10,1:31:255,181,92,255,0,241,255,126,255,255	3/3:0,0,1,20:22:255,255,255,255,255,255,66,63,47,0
+chr21	31800059	chr21:31800059:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15>,<16>,<21>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,10,7:17:255,255,255,124,189,159,255,179,0,255	1/3:0,11,0,9:22:255,172,239,255,255,255,255,0,187,255	2/2:0,0,25,0:25:255,255,255,75,73,0,255,255,75,255
+chr21	31802596	chr21:31802596:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:20:89,0,133	0/1:7,6:14:62,0,89	0/1:4,9:13:120,0,32
+chr21	31803120	chr21:31803120:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2:8:11,0,81	0/0:8,1:10:0,10,116	1/1:0,9:11:163,29,0
+chr21	31804468	chr21:31804468:M	TCTCTCTCTCTCTCTCTCT	<8.5>,<10.5>,<11.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,9,11,0:21:184,130,196,102,0,144,197,119,183,255	2/3:1,0,11,7:20:227,255,255,74,88,34,90,131,0,86	1/1:0,20,2,0:23:217,39,0,248,17,255,255,30,255,255
+chr21	31806342	chr21:31806342:M	ACAACAACAACAACAACAACAACAACAACAACAACAACAACAA	<9.3>,<10.3>	.	.	Motif=ACA	GT:AD:DP:PL	0/2:13,0,16:30:255,255,255,0,255,255	0/1:10,14,1:25:255,0,224,232,250,255	2/2:0,0,40:40:255,255,255,120,118,0
+chr21	31814221	chr21:31814221:M	TTTATTTATTTATTTATTTATTTATTATTTA	<8.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:16,11:27:120,0,211	0/0:40,0:40:0,118,255
+chr21	31821753	chr21:31821753:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,1,7:19:73,108,255,0,153,157	0/1:13,13,0:30:184,0,140,255,190,255	2/2:3,1,25:29:255,255,255,21,50,0
+chr21	31825690	chr21:31825690:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/1:21,21:42:248,0,245	0/0:35,1:37:0,90,255
+chr21	31830774	chr21:31830774:M	AAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:15:121,0,148	0/0:15,0:18:0,50,255	1/1:0,18:20:255,59,0
+chr21	31835152	chr21:31835152:M	ATTAATTAATTAATTAATTAATTAA	<5.2>	.	.	Motif=ATTA	GT:AD:DP:PL	0/1:25,18:43:222,0,255	0/0:38,0:38:0,112,255	1/1:0,41:41:255,121,0
+chr21	31837540	chr21:31837540:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,11:31:120,0,249	0/1:19,17:38:204,0,219	1/1:1,33:36:255,87,0
+chr21	31841226	chr21:31841226:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7:19:212,0,124	0/0:9,0:10:0,27,253	1/1:0,16:22:255,60,0
+chr21	31843710	chr21:31843710:M	TCTCTCTCTCTCTCT	<67.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,7:24:12,0,255	0/0:16,5:21:0,3,255	0/1:15,18:33:117,0,255
+chr21	31843779	chr21:31843779:M	TCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTC	<11.8>,<12.8>,<33.8>	.	.	Motif=TCCT	GT:AD:DP:PL	2/3:0,0,10,7:18:210,213,227,66,77,46,162,176,0,233	1/3:0,6,0,5:11:198,56,38,154,55,138,145,0,99,134	2/3:0,0,7,18:27:255,255,255,199,199,173,143,143,0,157
+chr21	31843834	chr21:31843834:M	TTTCTTTTTCTTTTT	<22.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:18,7:25:2,0,255	0/0:18,5:23:0,14,255	0/1:16,18:34:96,0,255
+chr21	31849903	chr21:31849903:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,6:8:191,115,96,23,6,0	1/2:0,12,8:20:255,130,72,194,0,137	2/2:0,1,5:6:159,84,67,18,1,0
+chr21	31850852	chr21:31850852:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,2:20:0,23,255	0/1:10,13:26:164,0,105	0/0:18,1:20:0,41,255
+chr21	31853113	chr21:31853113:M	ATATATATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:7:89,20,0	0/0:0,0:2:0,4,15	1/1:0,2:2:26,6,0
+chr21	31853137	chr21:31853137:M	ACACACACACATACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,3:8:51,0,51	0/0:6,0:6:0,18,135	1/1:0,2:4:45,6,0
+chr21	31853265	chr21:31853265:M	ATAGATAGATAGATAGATAGATAGATAGATA	<6.8>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:0,19:19:255,56,0	1/1:0,14:14:255,41,0
+chr21	31853741	chr21:31853741:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,13:44:146,0,255	0/1:7,6:13:71,0,88	0/0:29,0:32:0,89,255
+chr21	31855075	chr21:31855075:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:33:255,59,0	1/1:2,30:34:255,64,0	1/1:2,34:37:255,72,0
+chr21	31856724	chr21:31856724:M	TCTCTCTCTCTCTCTCTCTCTCT	<9.5>,<13.5>,<15.5>	.	.	Motif=TC	GT:AD:DP:PL	1/3:0,9,2,4:25:255,164,135,255,39,255,255,0,255,255	1/3:0,3,0,4:12:224,164,157,147,76,147,72,0,82,70	2/3:0,0,20,5:29:255,255,255,107,108,24,255,255,0,255
+chr21	31857384	chr21:31857384:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,23:43:255,0,191	1/1:0,28:29:255,85,0	0/0:33,0:33:0,97,255
+chr21	31857549	chr21:31857549:M	TTTTTTGTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,42:42:255,123,0	1/1:0,38:38:255,112,0
+chr21	31857814	chr21:31857814:M	ATTTATTTATTTATTTATTTATTTATTTATTT	<7>,<11>,<13>	.	.	Motif=ATTT	GT:AD:DP:PL	2/3:0,0,9,7:17:255,255,255,195,195,166,250,250,0,227	1/2:0,19,9,0:28:255,249,193,255,0,255,255,246,255,255	3/3:0,0,0,9:9:255,255,255,255,255,255,27,27,27,0
+chr21	31858141	chr21:31858141:M	TTGTTGTTGTT	<2.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:26,19:45:214,0,255	0/0:31,0:31:0,92,255
+chr21	31858924	chr21:31858924:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:239,40,0	0/1:6,11:20:155,0,57	1/1:2,8:13:140,2,0
+chr21	31862350	chr21:31862350:M	TTTTTTTTTTTTTCTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:21:115,0,144	1/1:1,21:23:255,49,0	0/0:30,2:34:0,61,255
+chr21	31863345	chr21:31863345:M	TTTTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,8:17:99,146,255,0,153,107	0/1:9,12,1:23:255,0,205,255,138,255	0/0:16,0,0:17:0,51,255,50,255,255
+chr21	31864998	chr21:31864998:M	CCTTCCTTTCTTCCTTCCTTCC	<6.5>	.	.	Motif=CCTT	GT:AD:DP:PL	0/1:17,11:30:150,0,235	1/1:0,15:15:255,44,0	0/0:27,0:27:0,80,255
+chr21	31865216	chr21:31865216:M	TCTATCAATCATCTATTTATCTATCATCTAT	<6.8>,<33.8>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:16,6,0:22:44,0,219,109,255,255	1/2:0,12,5:17:221,50,15,203,0,255	0/0:27,0,0:27:0,79,255,81,255,255
+chr21	31865578	chr21:31865578:M	ATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATC	<15.2>,<33.8>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:9,0,0:9:0,27,169,27,191,248	2/2:0,0,5:5:62,62,62,14,14,0	0/1:7,4,0:14:83,0,88,119,127,255
+chr21	31867823	chr21:31867823:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<16>	.	.	Motif=GA	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/1:10,13:25:255,0,196	0/0:24,0:27:0,72,255
+chr21	31868681	chr21:31868681:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,9:21:104,0,159	1/1:1,21:23:255,50,0	0/0:22,1:24:0,52,255
+chr21	31869154	chr21:31869154:M	GTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,7:18:255,122,156,255,0,255	1/1:0,12,0:13:255,39,0,255,39,255	2/2:2,0,13:15:190,231,255,9,45,0
+chr21	31871339	chr21:31871339:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,11,1:13:255,203,179,26,17,0,255,185,8,255	1/2:0,6,5,0:11:255,85,53,102,0,70,255,85,102,255	0/3:3,0,0,6:10:76,104,245,101,235,231,0,60,52,34
+chr21	31878259	chr21:31878259:M	AAAAAAAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,4:11:48,71,208,0,69,60	1/2:0,11,4:17:255,63,65,255,0,255	0/0:10,1,2:13:0,10,255,2,144,138
+chr21	31886424	chr21:31886424:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:127,0,92	0/1:11,8:19:82,0,133	0/0:38,1:42:0,104,255
+chr21	31892149	chr21:31892149:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:22:119,9,0	0/1:4,2:6:4,0,24	0/1:9,7:21:28,0,65
+chr21	31892181	chr21:31892181:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<16>,<17>	.	.	Motif=AG	GT:AD:DP:PL	0/2:4,2,5:11:73,33,46,0,23,54	0/0:6,1,0:7:0,8,51,18,69,118	1/2:3,5,7:17:117,39,37,3,0,43
+chr21	31892210	chr21:31892210:M	GTGTGTGTGTGTGTGTGTGTGT	<13>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:7,4:12:53,0,121	0/0:16,0:16:0,48,255
+chr21	31900447	chr21:31900447:M	ACACACACACACACACACACACACACACACACA	<15.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:7,0,13:20:175,230,255,0,106,67	1/2:1,17,19:40:255,255,255,255,0,255	0/0:21,2,0:23:0,33,255,67,255,255
+chr21	31905077	chr21:31905077:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:0,32:34:255,99,0	1/1:0,25:28:255,81,0
+chr21	31915055	chr21:31915055:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:23:255,66,0	1/1:0,24:27:255,75,0	1/1:0,31:33:255,96,0
+chr21	31917696	chr21:31917696:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<29>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,2:2:52,6,0	1/1:0,3:4:80,8,0	1/1:0,2:2:56,6,0
+chr21	31924267	chr21:31924267:M	TGTGTGTGTGTGTGTGTGTTTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,1:35:0,84,255	0/0:45,1:46:0,117,255	0/1:17,21:40:255,0,197
+chr21	31925925	chr21:31925925:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:0,21:21:255,62,0	0/1:17,25:42:255,0,185
+chr21	31926952	chr21:31926952:M	TTCTTTCTTTCTTTCCTTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTTTTCTTTCTTATTTCTTTATTTCTTT	<13>,<20.5>	.	.	Motif=TTCT	GT:AD:DP:PL	1/2:1,3,1:7:95,26,43,46,0,63	1/2:1,1,3:6:79,45,65,12,0,28	0/2:2,0,3:7:77,70,118,0,37,39
+chr21	31931069	chr21:31931069:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:3:8,0,24	1/1:0,1:1:16,3,0	0/1:1,4:5:50,0,1
+chr21	31932912	chr21:31932912:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:12:0,0,132	0/0:12,0:12:0,35,201	0/1:9,3:12:16,0,119
+chr21	31933785	chr21:31933785:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:21:0,61,255	0/0:22,1:28:0,52,255	0/1:5,10:17:138,0,41
+chr21	31934443	chr21:31934443:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,121	0/0:2,0:2:0,6,33	0/1:1,3:5:45,0,3
+chr21	31939718	chr21:31939718:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0,1:25:0,72,255,56,255,255	0/2:15,0,6:22:39,85,255,0,251,193	0/1:11,9,2:22:198,0,254,124,158,253
+chr21	31952206	chr21:31952206:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41:43:255,108,0	1/1:0,38:40:255,117,0	0/1:14,33:49:255,0,116
+chr21	31955259	chr21:31955259:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:25:255,62,0	1/1:0,21:22:255,66,0	0/1:18,10:31:206,0,255
+chr21	31955427	chr21:31955427:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,26:30:255,86,0	0/1:9,11:24:238,0,192
+chr21	31960382	chr21:31960382:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,1:40:0,95,255	0/0:50,2:52:0,118,255	0/1:31,23:58:244,0,255
+chr21	31965589	chr21:31965589:M	TTTTTCTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3,0:12:18,0,125,52,134,207	0/1:6,4,0:10:38,0,72,67,84,185	0/2:5,1,5:12:61,75,183,0,56,62
+chr21	31968716	chr21:31968716:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:13,1,6:22:88,33,255,0,224,203	0/0:16,0,0:19:0,56,255,50,255,255	1/2:0,6,14:24:255,150,85,107,0,39
+chr21	31968754	chr21:31968754:M	GAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:14,14:29:255,0,255	0/0:23,0:25:0,63,255	1/1:0,25:32:255,94,0
+chr21	31968804	chr21:31968804:M	GTGTTGTGTCTGTGTGTGTGTATGTGTTGTGTGTAAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<32>,<35>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,6:12:247,109,135,154,0,136	2/2:0,0,11:11:193,222,255,32,33,0	1/1:0,17,0:17:255,51,0,255,51,255
+chr21	31971070	chr21:31971070:M	TTTATTTATTTATTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,32:37:118,45,0	1/1:0,28:30:107,42,0	1/1:0,24:29:90,35,0
+chr21	31971831	chr21:31971831:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:18:56,0,160	0/0:14,1:19:0,37,255	1/1:0,9:13:181,26,0
+chr21	31973562	chr21:31973562:M	GATGATGGTGATGGTGGTGGTGATGATGATGATGATGATGATGATGATG	<17.3>	.	.	Motif=GAT	GT:AD:DP:PL	0/1:15,9:24:101,0,216	0/0:20,0:20:0,59,255	1/1:0,22:22:255,65,0
+chr21	31974997	chr21:31974997:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,2:22:0,27,255	0/0:34,2:36:0,70,255	0/1:19,7:27:57,0,255
+chr21	31979109	chr21:31979109:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:26:222,0,255	0/0:26,0:30:0,89,255	1/1:0,16:19:255,47,0
+chr21	31979516	chr21:31979516:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:12,3,0	0/0:0,0:1:0,3,14	1/1:0,4:4:117,12,0
+chr21	31989714	chr21:31989714:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:11:83,0,120	0/0:12,0:12:0,36,255	1/1:0,8:11:233,27,0
+chr21	31995159	chr21:31995159:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:6,0,11	1/1:0,0:4:24,6,0	1/1:0,3:3:49,9,0
+chr21	32001654	chr21:32001654:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,10:30:104,0,255	0/0:36,0:36:0,106,255	1/1:0,45:45:255,133,0
+chr21	32005669	chr21:32005669:M	AAAAAAAACAAAAAAACAAAAACAAAAAAAAA	<26>,<38>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,14:31:255,255,255,255,0,255	1/2:0,14,11:25:255,255,236,255,0,255	2/2:0,0,16:16:255,255,255,48,48,0
+chr21	32007938	chr21:32007938:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:57,6,0	1/1:0,0:3:3,1,0	1/1:0,7:8:199,21,0
+chr21	32008238	chr21:32008238:M	AAAACAAAACAAAACAAAACAAA	<2.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,50:50:255,150,0	1/1:0,32:32:255,96,0	1/1:0,35:35:255,105,0
+chr21	32013127	chr21:32013127:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:39:255,96,0	0/1:21,18:42:216,0,255	1/1:1,27:30:255,70,0
+chr21	32020058	chr21:32020058:M	CAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATA	<15>,<16>,<17>	.	.	Motif=CAATA	GT:AD:DP:PL	1/2:0,3,3,0:6:126,54,38,47,0,38,109,47,55,126	0/1:3,6,0,0:9:78,0,26,87,52,165,103,52,182,236	2/3:0,0,3,3:6:158,131,122,53,53,36,53,45,0,36
+chr21	32029559	chr21:32029559:M	ACACACACACACACACACACACACACACACA	<13.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,15:27:195,231,255,0,217,142	1/2:0,7,14:21:255,203,182,120,0,60	0/0:20,1,0:21:0,33,255,50,255,255
+chr21	32034249	chr21:32034249:M	TTTTTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10,0:18:251,0,182,255,147,255	1/2:0,11,9:20:255,157,206,255,0,255	0/0:18,0,0:18:0,54,255,53,255,255
+chr21	32044874	chr21:32044874:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,1,3:7:31,34,100,0,26,43	1/2:1,4,1:8:69,2,7,71,0,118	0/2:1,0,2:4:34,43,76,0,14,5
+chr21	32046185	chr21:32046185:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,28:43:255,0,159	0/1:24,18:42:201,0,255	0/0:30,0:30:0,89,255
+chr21	32046565	chr21:32046565:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:25:147,0,255	0/1:13,12:26:244,0,255	0/0:38,0:41:0,117,255
+chr21	32048116	chr21:32048116:M	ACACACAGACACACACACACACACACACACAGACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,16:32:212,0,185	0/1:17,15:33:167,0,212	0/0:31,1:32:0,76,255
+chr21	32049955	chr21:32049955:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:18:76,0,150	0/0:26,1:27:0,62,255	0/1:20,19:40:225,0,252
+chr21	32053344	chr21:32053344:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18,5:45:255,0,255,246,255,255	0/2:14,2,8:25:85,84,255,0,216,183	2/2:1,3,21:25:255,255,255,55,19,0
+chr21	32069592	chr21:32069592:M	TATCTATCTCTATCTACCTACCTACCTATCAATCTAT	<11.2>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:17,20:47:255,0,255	0/0:22,0:30:0,66,255	0/1:12,15:33:255,0,217
+chr21	32077210	chr21:32077210:M	ACACACACCACAACACACACACATACACACACACACACACACACACACACACACACACACACACAC	<36>	.	.	Motif=AC	GT:AD:DP:PL	.	1/1:0,4:4:104,12,0	1/1:0,3:3:79,9,0
+chr21	32078377	chr21:32078377:M	TATTTATTTATTTATTTATTTATTTAT	<9.8>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,10:26:204,0,255	0/0:34,0:35:0,94,255	0/1:14,13:27:255,0,255
+chr21	32080091	chr21:32080091:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:31:95,0,255	0/0:31,1:37:0,87,255	0/1:20,9:31:73,0,255
+chr21	32080732	chr21:32080732:M	TCTCTCTCTCTTTCCTTCTTTCTCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTCTCTCTCTCTCTCTCT	<4.5>,<32>,<37>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,1,3,2:7:94,75,94,25,23,37,74,50,0,68	1/3:0,3,0,3:7:98,38,65,107,74,142,68,0,69,59	2/3:0,2,6,5:17:202,171,224,73,85,114,144,99,0,126
+chr21	32086693	chr21:32086693:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:13:21,0,120	0/0:9,0:11:0,32,172	0/1:11,4:16:22,0,154
+chr21	32092087	chr21:32092087:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:17,0,122	0/1:5,2:8:13,0,63	0/0:11,1:13:0,21,181
+chr21	32096335	chr21:32096335:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,12,98	0/1:10,4:16:49,0,207	0/1:7,6:15:104,0,131
+chr21	32098421	chr21:32098421:M	CTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7.8>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:4,2:6:36,0,98	1/1:0,3:4:97,12,0	0/0:3,0:4:0,11,97
+chr21	32108422	chr21:32108422:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:13:96,0,51	1/1:1,7:11:126,13,0	0/1:1,2:4:23,0,18
+chr21	32109144	chr21:32109144:M	AACAAAAACAAAAAAAAAAC	<3.7>	.	.	Motif=AACAAA	GT:AD:DP:PL	0/1:15,16:32:255,0,255	1/1:0,35:38:255,107,0	0/1:27,19:46:255,0,255
+chr21	32110501	chr21:32110501:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,20,12:33:255,185,121,255,0,255	1/2:0,12,19:32:255,255,237,206,0,118	1/1:0,46,1:50:255,144,0,255,126,255
+chr21	32115837	chr21:32115837:M	TATATATATATCATATATATAATATACATTATATTATTATATATAATAATATAT	<29>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,6:11:105,0,83	0/1:1,1:2:17,0,17	0/0:11,0:11:0,33,254
+chr21	32119419	chr21:32119419:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:27:255,75,0	1/1:1,22:24:255,50,0	1/1:1,27:30:255,69,0
+chr21	32120646	chr21:32120646:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,14:27:179,0,117	0/1:9,11:21:136,0,91	1/1:0,31:34:255,99,0
+chr21	32121018	chr21:32121018:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:10:43,0,60	0/0:10,1:11:0,15,152	0/1:6,8:16:92,0,76
+chr21	32125166	chr21:32125166:M	TTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:22:255,29,0	0/1:3,16:21:255,0,39	1/1:0,22:25:255,73,0
+chr21	32126948	chr21:32126948:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:113,29,17,61,0,47	0/1:3,4,0:8:95,0,60,73,49,103	1/2:1,2,4:7:86,41,58,17,0,14
+chr21	32130074	chr21:32130074:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:14:255,33,0	1/1:1,9:12:233,5,0	1/1:0,17:18:255,51,0
+chr21	32133461	chr21:32133461:M	AAACAAACAAACAAACAAACAAACAAACAGACAAACA	<10.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:11,11:22:147,0,148	0/1:12,6:18:56,0,165	0/0:32,0:32:0,95,255
+chr21	32144785	chr21:32144785:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,2:23:0,9,255	0/1:11,12:28:242,0,251	1/1:0,15:19:255,50,0
+chr21	32147949	chr21:32147949:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:41,0,41	0/1:3,2:7:48,0,61	1/1:0,5:7:133,14,0
+chr21	32157028	chr21:32157028:M	TTTCCTTTCTTTTCCTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<8.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:2,8:10:122,0,9	1/1:0,7:8:139,23,0	0/1:6,2:8:14,0,90
+chr21	32158472	chr21:32158472:M	TTTTTTTTTTTTTTCTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,29:48:255,0,200	0/1:15,10:25:102,0,189	1/1:0,34:34:255,100,0
+chr21	32160286	chr21:32160286:M	ACACACACACACACACACACACACACACACACACACACACACACACATACAC	<19>,<20>	.	.	Motif=AC	GT:AD:DP:PL	0/2:9,0,13:22:255,229,255,0,237,199	0/2:6,0,10:16:246,168,255,0,154,124	1/2:0,12,17:30:255,255,210,217,0,133
+chr21	32160650	chr21:32160650:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,14:24:189,0,115	0/1:11,15:26:187,0,117	0/1:16,12:29:141,0,205
+chr21	32161471	chr21:32161471:M	TTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTGTTT	<10>,<11>	.	.	Motif=TTGT	GT:AD:DP:PL	0/2:10,0,14:24:255,255,255,0,190,216	0/1:8,13,0:21:175,0,84,199,144,255	0/2:20,0,13:33:255,239,255,0,255,255
+chr21	32165433	chr21:32165433:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:41:0,116,255	0/1:24,8:34:43,0,255	0/1:14,11:30:121,0,203
+chr21	32175809	chr21:32175809:M	CAAAAAAAACAAAAACAAAAACAAAACAA	<6>	.	.	Motif=CAAAA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:30,0:30:0,90,255	0/1:11,19:30:255,0,166
+chr21	32177898	chr21:32177898:M	CTTTTTTTTTCTTTTGTTTTCTTTTCTTTTTTTT	<5.8>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:27,0:27:0,79,255	1/1:0,11:11:205,32,0
+chr21	32179440	chr21:32179440:M	CACACACACACACA	<6>	.	.	Motif=CA	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/0:37,0:37:0,109,255	0/1:24,22:46:255,0,255
+chr21	32188004	chr21:32188004:M	TCTCTCTCTCTCTCTCTGTCCCTTTCTCTCTCTCTC	<22>	.	.	Motif=TC	GT:AD:DP:PL	0/0:29,0:31:0,89,255	0/0:25,0:28:0,80,255	0/1:14,6:21:98,0,255
+chr21	32193467	chr21:32193467:M	GATAGATAGATAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATAGAT	<14.8>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:8,11:20:120,0,72	1/1:0,10:10:153,29,0	0/0:14,0:22:0,48,239
+chr21	32196460	chr21:32196460:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:3:0,9,54	0/1:6,3:9:25,0,76	0/0:8,1:9:0,9,122
+chr21	32200430	chr21:32200430:M	TTTTTCTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,1:17:0,32,255	0/0:21,1:23:0,50,255	0/1:9,6:16:62,0,115
+chr21	32209156	chr21:32209156:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:43:0,126,255	0/0:40,0:42:0,123,255	0/1:21,21:44:255,0,255
+chr21	32236211	chr21:32236211:M	AAAAAAAAAAAAATACAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/0:19,0:19:0,56,255	0/1:8,14:23:197,0,79
+chr21	32240770	chr21:32240770:M	TGGTTTTGGTTTT	<2.3>	.	.	Motif=TGGTTT	GT:AD:DP:PL	1/1:1,32:34:255,81,0	1/1:0,29:29:255,80,0	1/1:0,44:44:255,122,0
+chr21	32258835	chr21:32258835:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<9>,<10>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:12,8,0:20:133,0,236,103,157,210	0/2:9,0,9:19:69,86,255,0,108,67	0/1:8,8,0:16:145,0,148,102,103,165
+chr21	32268930	chr21:32268930:M	TTTTTTTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,4:35:0,29,255	0/0:17,0:17:0,50,255	0/1:11,11:22:134,0,134
+chr21	32270263	chr21:32270263:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/0:31,0:32:0,94,255	0/1:16,19:37:240,0,191
+chr21	32280506	chr21:32280506:M	TTTTTTTTTTCTTTTCTTTATTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:23,0:23:0,68,255	0/1:14,18:33:242,0,181
+chr21	32287244	chr21:32287244:M	CACACACACACACACACACACACACACACACACAC	<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,17:31:182,0,134	1/1:4,29:34:255,36,0	0/0:39,0:41:0,118,255
+chr21	32295976	chr21:32295976:M	AAAAAACAAAACAAAACAAAACAAAAAACAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:21,29:50:255,0,255	0/0:23,0:23:0,69,255
+chr21	32301030	chr21:32301030:M	ATATCAAATATATCATATGATATATATCATATCATATATCCATATATATCATGATATATCGTATATGATATCATAT	<12>	.	.	Motif=ATATC	GT:AD:DP:PL	0/0:10,1:13:0,5,244	0/1:12,4:16:61,0,255	0/1:9,3:15:48,0,207
+chr21	32302980	chr21:32302980:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,3,2:15:44,8,99,0,83,173	0/0:15,0,0:16:0,46,254,48,255,255	1/2:0,3,4:10:164,90,69,42,0,21
+chr21	32304613	chr21:32304613:M	CAAACAAAAAAAAACAAACAAAAAACAAAACAAAACAAACAAACAAACAAAACAAAC	<13.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:11,6:27:35,0,77	0/0:18,0:31:0,34,186	1/1:0,27:38:255,83,0
+chr21	32304954	chr21:32304954:M	TTTTTTTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:8:67,0,12	0/0:1,0:1:0,3,17	1/1:0,11:11:192,32,0
+chr21	32315315	chr21:32315315:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:34:123,0,223	0/1:11,4:18:15,0,162	0/1:6,18:25:244,0,30
+chr21	32329107	chr21:32329107:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:34:255,78,0	1/1:1,22:24:255,52,0	1/1:2,27:29:255,49,0
+chr21	32330198	chr21:32330198:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:5:87,0,16,88,17,101	1/1:0,5,0:9:198,24,0,184,22,177	0/2:2,0,4:7:50,56,147,0,23,16
+chr21	32332478	chr21:32332478:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,10:14:255,33,0	1/1:0,11:14:255,33,0
+chr21	32332508	chr21:32332508:M	AAAAAAACAAAAGACAAAAAAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,2:10:0,0,56	0/1:2,4:7:29,0,16	0/0:7,1:11:0,16,93
+chr21	32332555	chr21:32332555:M	AAAAAAACAAAAGACAAAAAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5,1:7:67,8,0,48,5,58	2/2:0,0,3:3:76,47,39,9,8,0	1/1:0,3,1:5:40,1,0,19,1,39
+chr21	32333103	chr21:32333103:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:248,0,255	1/1:1,36:37:255,91,0	0/0:53,1:54:0,141,255
+chr21	32342038	chr21:32342038:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,35:35:255,102,0	1/1:0,40:40:255,116,0
+chr21	32357315	chr21:32357315:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:19:0,28,255	0/1:17,6:24:33,0,217	0/0:14,2:17:0,15,215
+chr21	32369976	chr21:32369976:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:22,0,22	0/0:6,0:6:0,17,98	1/1:1,7:8:100,6,0
+chr21	32376807	chr21:32376807:M	TTTGTTTTGTTTGTTTGTTTGTTTGTTTGTTT	<9>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:12,14:26:192,0,154	0/0:32,0:33:0,97,255	1/1:0,35:35:255,103,0
+chr21	32381427	chr21:32381427:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:35:237,0,185	1/1:2,32:36:255,70,0	0/0:24,3:27:0,26,255
+chr21	32384987	chr21:32384987:M	GAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	<11.8>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:12,10:22:128,0,167	1/1:0,14:14:253,41,0	0/0:22,0:22:0,65,255
+chr21	32387601	chr21:32387601:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:95,6,0	1/1:1,9:13:152,17,0	1/1:0,9:9:153,26,0
+chr21	32391370	chr21:32391370:M	AAAAAAAAAAGAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,16:40:193,0,255	1/1:0,29:31:255,90,0	0/0:35,0:37:0,108,255
+chr21	32391857	chr21:32391857:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,10:17:132,0,77	0/1:4,19:25:255,0,6	0/0:30,1:31:0,74,255
+chr21	32397699	chr21:32397699:M	AAAAAAAAAAAAAAAAAAAAGAGAAAAGAAAAAAGAAAAAAAAA	<45>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:5:37,0,20	1/1:0,2:3:34,7,0	0/0:7,0:9:0,26,139
+chr21	32403009	chr21:32403009:M	AAAAAAAAAAGAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,19:35:255,0,199	1/1:1,43:44:255,112,0	0/0:39,0:40:0,118,255
+chr21	32404234	chr21:32404234:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,6:20:98,0,255	1/1:0,13:15:255,42,0	0/0:14,0:18:0,47,255
+chr21	32404797	chr21:32404797:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:3:29,0,19	1/1:0,9:10:255,30,0	0/0:1,0:1:0,3,26
+chr21	32406053	chr21:32406053:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:124,0,11	1/1:0,11:13:255,39,0	0/0:0,0:1:0,1,2
+chr21	32416305	chr21:32416305:M	TTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,3:18:0,0,216	0/1:7,6:13:64,0,81	0/0:12,2:17:0,12,194
+chr21	32422045	chr21:32422045:M	AAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,3:10:56,76,165,0,102,140	2/2:0,0,2:5:93,94,96,14,14,0	0/1:7,6,0:14:75,0,80,113,120,255
+chr21	32423071	chr21:32423071:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,6:9:202,24,0	.
+chr21	32425151	chr21:32425151:M	AAACAAACAAACAAACAAACAA	<7.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:17,9:30:167,0,255	1/1:0,32:34:255,98,0	0/0:38,0:38:0,114,255
+chr21	32425963	chr21:32425963:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,20:41:255,0,250	1/1:0,34:34:255,100,0	0/0:40,0:42:0,123,255
+chr21	32427856	chr21:32427856:M	AAAAAAAAAAAAAAAAAAAAAA	<19>,<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4,0,0:5:138,15,0,96,15,84,135,15,96,133	1/2:0,7,4,0:12:255,68,33,129,0,96,255,57,128,249	3/3:1,1,0,12:14:194,202,255,186,228,209,21,12,29,0
+chr21	32434594	chr21:32434594:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<6.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,9:19:198,0,223	1/1:0,10:11:255,30,0	0/0:13,0:13:0,39,255
+chr21	32438487	chr21:32438487:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:16,0,51	1/1:0,4:4:65,12,0	0/1:2,3:5:35,0,19
+chr21	32442664	chr21:32442664:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:23:105,0,148	0/1:4,7:11:87,0,36	0/1:13,4:18:17,0,185
+chr21	32444054	chr21:32444054:M	ACACACACACACACACACACACACACACACACACACACA	<16.5>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,9,14:24:255,255,255,242,0,190	2/2:0,0,30:32:255,255,255,96,87,0	0/1:8,14,0:23:255,0,180,255,203,255
+chr21	32447533	chr21:32447533:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:255,0,199	1/1:1,32:35:255,84,0	0/0:34,0:36:0,105,255
+chr21	32450384	chr21:32450384:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,19:30:255,0,106	1/1:2,26:28:255,47,0	0/0:32,0:36:0,104,255
+chr21	32463727	chr21:32463727:M	AAACAAAACAAAACAAAAAAAA	<4.2>	.	.	Motif=AAACA	GT:AD:DP:PL	0/1:25,17:42:255,0,255	1/1:0,44:44:255,131,0	0/0:44,1:45:0,112,255
+chr21	32463782	chr21:32463782:M	AAAAAAAGAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,20:39:255,0,247	1/1:0,45:45:255,132,0	0/0:51,0:51:0,150,255
+chr21	32466825	chr21:32466825:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,21:34:255,0,132	1/1:2,27:30:255,52,0	0/0:31,3:34:0,46,255
+chr21	32467906	chr21:32467906:M	ATATATATATATATATCCTATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,15:41:112,0,227	1/1:0,16:17:228,46,0	0/0:31,0:32:0,89,255
+chr21	32470735	chr21:32470735:M	TCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTT	<8.5>	.	.	Motif=TCTT	GT:AD:DP:PL	0/0:16,6:32:0,7,29	1/1:0,13:26:44,17,0	0/0:20,0:27:0,29,71
+chr21	32471317	chr21:32471317:M	TTTTTTTCTTTTTTCTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,30,255	1/1:0,10:12:255,33,0	0/0:18,0:19:0,57,255
+chr21	32472155	chr21:32472155:M	ATTTATTTATTTATTTATTT	<3>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:1,3:5:61,0,12	0/0:41,0:41:0,123,255
+chr21	32472638	chr21:32472638:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:41:255,0,214	1/1:0,47:47:255,138,0	0/0:27,1:28:0,65,255
+chr21	32475341	chr21:32475341:M	ATCATCATCATCATCATCATCATCATCAT	<10.7>	.	.	Motif=ATC	GT:AD:DP:PL	0/1:16,19:35:255,0,206	1/1:2,30:32:255,58,0	0/0:29,1:31:0,72,255
+chr21	32475880	chr21:32475880:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<13.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,9:9:172,27,0	.	0/1:14,13:27:162,0,181
+chr21	32479848	chr21:32479848:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:196,0,205	1/1:0,30:31:255,91,0	0/0:45,1:47:0,120,255
+chr21	32480303	chr21:32480303:M	AAAAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:19:0,56,255	1/1:0,3:3:82,9,0	0/0:34,0:38:0,113,255
+chr21	32480962	chr21:32480962:M	AAAAAAAAAAAAATAAATAAAAATAAAATAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:165,0,184	1/1:0,23:23:255,68,0	0/0:16,2:18:0,16,255
+chr21	32481510	chr21:32481510:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:35:255,0,170	1/1:2,31:35:255,67,0	0/0:32,4:36:0,32,255
+chr21	32482855	chr21:32482855:M	TTTTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:12:0,35,255	0/0:6,0:7:0,19,175	0/1:3,27:32:255,0,11
+chr21	32483963	chr21:32483963:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,8:24:255,108,191,255,0,255	1/1:0,31,0:31:255,93,0,255,93,255	0/2:12,1,8:21:84,114,255,0,184,155
+chr21	32488588	chr21:32488588:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:40:246,0,255	1/1:1,28:30:255,68,0	0/0:30,1:34:0,81,255
+chr21	32492700	chr21:32492700:M	TTTTCTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,24:40:255,0,185	1/1:2,32:35:255,66,0	0/0:36,2:39:0,78,255
+chr21	32493771	chr21:32493771:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<9.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,10,10:20:255,166,136,191,0,135	1/1:0,19,0:19:255,57,0,255,56,255	0/2:12,0,7:19:76,112,255,0,223,171
+chr21	32494782	chr21:32494782:M	AAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:32:231,0,255	1/1:0,11:13:255,38,0	0/0:30,0:33:0,98,255
+chr21	32498440	chr21:32498440:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:16:41,0,121	1/1:1,9:12:152,17,0	0/0:18,0:18:0,53,255
+chr21	32500191	chr21:32500191:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:107,12,0	1/1:0,7:8:218,24,0	0/0:2,0:2:0,6,72
+chr21	32500818	chr21:32500818:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10:26:110,0,222	1/1:1,28:30:255,70,0	0/0:41,0:41:0,121,255
+chr21	32513167	chr21:32513167:M	TTATTTTATTTTATTTATTTATTTT	<4.8>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:10,6:16:81,0,168	0/0:24,0:24:0,72,255
+chr21	32513541	chr21:32513541:M	TTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:7:0,21,188	0/1:3,4:8:79,0,59	0/0:11,0:11:0,33,255
+chr21	32516184	chr21:32516184:M	TTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:21:0,63,255	0/1:5,11:22:255,0,126	0/0:13,0:17:0,51,255
+chr21	32519455	chr21:32519455:M	ACACACACAAACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<30>	.	.	Motif=AC	GT:AD:DP:PL	0/2:4,0,3:7:31,51,184,0,68,48	0/1:2,5,0:9:129,0,44,137,42,173	0/2:7,0,2:9:7,34,236,0,117,92
+chr21	32523066	chr21:32523066:M	TAAAAATAAAAA	<2.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/0:53,0:54:0,160,255	0/1:17,17:34:255,0,255	0/0:40,0:40:0,120,255
+chr21	32531819	chr21:32531819:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	<1.8>,<4.8>	.	.	Motif=AGGG	GT:AD:DP:PL	1/2:0,0,1:3:59,26,19,19,0,11	1/2:0,3,7:12:255,191,168,84,0,55	1/2:0,0,1:5:58,42,38,9,0,0
+chr21	32540787	chr21:32540787:M	AAAAAAAAAACAAACAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:10,16:26:191,0,91	0/0:26,1:28:0,65,255
+chr21	32545033	chr21:32545033:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:12:0,6,154	0/1:6,7:14:92,0,64	0/0:16,2:20:0,8,251
+chr21	32553744	chr21:32553744:M	AAAAAAAAAAAGAAAAGAAAAAAAGAAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:0,20:21:255,61,0	1/1:0,25:25:255,74,0
+chr21	32560849	chr21:32560849:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:52,0:52:0,154,255	0/1:26,28:55:255,0,255	0/0:49,1:52:0,134,255
+chr21	32567198	chr21:32567198:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<8.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:16,0:17:0,51,255	0/1:6,8:14:181,0,127	0/0:20,0:20:0,60,255
+chr21	32572220	chr21:32572220:M	GTTTTTTTTGTTTTGTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTT	<10.6>	.	.	Motif=GTTTT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:10,18:28:255,0,160	0/0:15,0:15:0,45,255
+chr21	32572428	chr21:32572428:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:39:0,112,255	0/1:17,11:29:216,0,255	0/0:33,0:33:0,99,255
+chr21	32580477	chr21:32580477:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,3:14:47,0,244	0/1:3,3:10:61,0,76	0/0:12,0:18:0,45,255
+chr21	32582567	chr21:32582567:M	TTTCTTTCTTCTTTCTTTCCTTTCTTTCTTTCTTTTCTTTTCTTTTTTC	<13.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:10,11:21:137,0,119	0/0:24,0:24:0,71,255
+chr21	32586207	chr21:32586207:M	GTGTGTGTGTGTGTCCTGAGGTGTGCGAGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:28:0,72,255	0/1:12,6:20:38,0,126	0/0:16,0:20:0,46,242
+chr21	32590335	chr21:32590335:M	GAGAAAGAGAAAGAAAAAGAAAGAAAGAGGAAAGAAAGAGAGAGAGAGAAAGA	<8.2>	.	.	Motif=GAGAAA	GT:AD:DP:PL	0/0:23,0:24:0,69,255	0/1:10,6:16:114,0,223	0/0:20,0:24:0,60,255
+chr21	32598546	chr21:32598546:M	TTTTTTTTTTCTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,2:16:3,0,255	0/1:4,6:10:123,0,79	0/0:9,1:10:0,4,214
+chr21	32608225	chr21:32608225:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:8:54,0,24	0/1:3,2:7:21,0,36	0/1:5,2:9:18,0,54
+chr21	32614237	chr21:32614237:M	TTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:6:0,17,140	0/1:3,11:15:255,0,57	0/0:5,0:6:0,18,160
+chr21	32625344	chr21:32625344:M	ATTTTTTTATTTTATTTATTTATTTATT	<6.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:15,24:39:255,0,237	0/0:28,0:28:0,84,255
+chr21	32627525	chr21:32627525:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:26,0,9	0/1:1,4:5:52,0,2	0/0:4,0:6:0,15,80
+chr21	32637394	chr21:32637394:M	TTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,90	1/1:0,7:9:98,4,0	0/0:6,1:8:0,5,97
+chr21	32667112	chr21:32667112:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:53,0:54:0,159,255	0/1:23,22:47:250,0,255	0/0:52,0:53:0,156,255
+chr21	32668010	chr21:32668010:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:7,0,21:30:255,255,255,0,117,29	1/2:1,14,10:29:255,151,238,255,0,255	1/2:0,23,9:32:255,145,171,255,0,255
+chr21	32674624	chr21:32674624:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,29:30:255,255,255,88,70,0	1/2:0,20,11:33:255,163,98,255,0,255	2/2:2,1,30:33:255,255,255,60,78,0
+chr21	32697499	chr21:32697499:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:18,17:38:206,0,215	0/0:18,3:23:0,12,255
+chr21	32722190	chr21:32722190:M	AAAAAAAAAAAAAAAAA	<11>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,1:7:1,21,177,0,124,108	1/2:0,5,3:8:189,63,64,133,0,124	0/0:6,0,0:7:0,21,186,21,158,145
+chr21	32744261	chr21:32744261:M	AAAAAAAAAAAAAAAAGAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,7:11:149,0,23	0/1:6,7:18:130,0,129	0/1:7,8:22:163,0,125
+chr21	32755128	chr21:32755128:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,27:31:255,19,0	1/1:1,28:33:255,78,0	1/1:1,42:45:255,114,0
+chr21	32758645	chr21:32758645:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,2:15:0,8,180	0/1:5,5:12:73,0,50	0/1:6,1:11:3,0,95
+chr21	32760888	chr21:32760888:M	TGTGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:20:255,56,0	0/1:8,12:20:147,0,78	1/1:0,16:16:255,47,0
+chr21	32763995	chr21:32763995:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:15:1,0,149	0/1:10,11:22:127,0,100	0/0:16,1:19:0,28,253
+chr21	32775615	chr21:32775615:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:24:255,16,0	1/1:2,17:19:255,21,0	1/1:0,9:11:182,32,0
+chr21	32777563	chr21:32777563:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:20:30,0,209	0/0:17,1:20:0,41,255	0/1:15,4:20:12,0,212
+chr21	32780407	chr21:32780407:M	AAAAAGAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:27:255,78,0	0/1:3,21:26:255,0,2	1/1:0,26:30:255,83,0
+chr21	32784925	chr21:32784925:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,40:40:255,118,0	1/1:1,39:40:255,100,0
+chr21	32792904	chr21:32792904:M	TTATTATTATTATT	<5>,<6.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:1,6,37:47:255,255,255,14,0,5	1/2:0,10,30:40:255,255,255,38,0,55	1/2:0,10,33:43:255,255,255,38,0,47
+chr21	32792916	chr21:32792916:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,38:43:255,84,0	1/1:0,29:31:255,78,0	1/1:0,30:35:255,80,0
+chr21	32800804	chr21:32800804:M	AAAAAAACAAAAAAAAAACCAAAAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,13:13:255,39,0	1/1:0,28:28:255,84,0
+chr21	32804276	chr21:32804276:M	TATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,19:19:255,56,0	1/1:1,34:35:255,85,0
+chr21	32805361	chr21:32805361:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,28:30:255,89,0	1/1:1,28:29:255,60,0
+chr21	32807335	chr21:32807335:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:152,18,0	1/1:0,10:11:255,33,0	1/1:0,5:7:167,20,0
+chr21	32809183	chr21:32809183:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:2,7,1,6:16:239,141,149,173,87,255,87,0,196,198	1/2:0,6,3,0:11:179,84,61,102,0,149,161,52,166,222	3/3:0,0,0,7:7:223,223,222,141,141,121,21,21,21,0
+chr21	32809266	chr21:32809266:M	TCCCTCCCTCC	<3.8>	.	.	Motif=TCCC	GT:AD:DP:PL	1/1:0,25:25:255,70,0	1/1:0,14:16:187,42,0	1/1:0,22:22:255,61,0
+chr21	32810247	chr21:32810247:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:100,12,0	1/1:0,2:2:58,6,0	1/1:0,2:2:58,6,0
+chr21	32810422	chr21:32810422:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:12:47,0,73	0/1:7,2:9:7,0,91	0/0:8,0:8:0,23,138
+chr21	32820387	chr21:32820387:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,4:25:19,0,255	0/0:18,2:21:0,3,255	0/1:15,6:23:80,0,255
+chr21	32823072	chr21:32823072:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:11,8:20:177,0,249	1/1:0,7:7:193,21,0	0/0:29,0:29:0,87,255
+chr21	32826211	chr21:32826211:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,2:3:66,9,0	.
+chr21	32847782	chr21:32847782:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,19:42:244,0,255	1/1:0,37:39:255,114,0	0/0:45,0:45:0,133,255
+chr21	32861553	chr21:32861553:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:10:34,0,76	0/0:12,1:14:0,14,174	0/0:10,1:11:0,15,155
+chr21	32869647	chr21:32869647:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCTATCT	<13.8>,<16.8>	.	.	Motif=TCTA	GT:AD:DP:PL	0/2:14,0,10:24:255,255,255,0,255,255	1/2:0,7,13:20:255,255,255,128,0,206	0/0:24,0,0:24:0,71,255,72,255,255
+chr21	32887709	chr21:32887709:M	ACACACACACACACACACACACACACACACACACACACAC	<18>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,13:33:255,199,139,255,0,255	1/2:0,16,13:31:255,187,133,255,0,210	2/2:0,2,21:23:255,255,255,67,32,0
+chr21	32888296	chr21:32888296:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,20:42:255,0,255	1/1:0,54:54:255,159,0	0/0:47,0:47:0,139,255
+chr21	32890901	chr21:32890901:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,20:45:247,0,255	1/1:0,26:26:255,76,0	0/0:35,0:35:0,103,255
+chr21	32891062	chr21:32891062:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:34,0,124	0/0:13,1:14:0,24,207	0/1:8,5:13:50,0,104
+chr21	32901909	chr21:32901909:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:31:255,81,0	1/1:2,36:41:255,84,0	0/1:19,25:49:255,0,220
+chr21	32914140	chr21:32914140:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:19,27:48:255,0,196	0/1:26,16:42:168,0,255
+chr21	32918456	chr21:32918456:M	GGGGGGGGGGTGGGGGG	<19>,<20>	.	.	Motif=G	GT:AD:DP:PL	1/2:0,5,3:14:191,41,17,65,0,49	1/1:0,6,0:22:149,20,0,96,21,120	1/2:0,1,7:18:220,94,69,15,0,21
+chr21	32927053	chr21:32927053:M	GTGTGTGTGTGTGTGTATGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,49:49:255,144,0	0/1:18,16:34:201,0,237
+chr21	32930199	chr21:32930199:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:8:183,23,0	1/1:0,6:6:207,18,0	1/1:0,6:7:211,21,0
+chr21	32932474	chr21:32932474:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,4:41:0,47,255	0/1:17,17:35:205,0,195	0/0:33,4:38:0,39,255
+chr21	32933983	chr21:32933983:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:2:59,6,0	1/1:0,6:7:176,18,0	.
+chr21	32936125	chr21:32936125:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:15:0,43,231	0/1:11,4:15:17,0,121	0/0:13,1:15:0,25,182
+chr21	32936328	chr21:32936328:M	TATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:28,0:30:0,89,255	0/1:17,11:30:214,0,255	0/0:41,0:41:0,123,255
+chr21	32943260	chr21:32943260:M	TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<6.8>,<9.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	2/2:1,0,11:14:195,228,255,16,36,0	2/2:0,0,20:24:255,255,255,59,60,0	1/2:0,10,8:18:255,150,195,255,0,255
+chr21	32944636	chr21:32944636:M	ACAACACAACACAACACAACACAACA	<7.2>	.	.	Motif=ACAAC	GT:AD:DP:PL	0/0:21,0:21:0,63,255	0/0:29,0:29:0,87,255	0/1:18,9:27:165,0,255
+chr21	32950893	chr21:32950893:M	TTTTTTTTTTTTTTTTTTTT	<17>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:1,0,4,7:12:187,176,252,87,133,102,53,60,0,36	2/3:0,0,4,15:19:255,255,255,211,252,199,67,57,0,12	1/3:3,15,2,4:27:255,22,81,255,68,255,255,0,255,255
+chr21	32965121	chr21:32965121:M	ACACACACACACACACACACATACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,22:35:255,0,144	0/0:33,0:33:0,97,255	0/1:24,23:48:255,0,255
+chr21	32967436	chr21:32967436:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:19:84,0,113	1/1:2,16:19:251,21,0	0/0:14,0:15:0,44,255
+chr21	32976555	chr21:32976555:M	CACACACACACACACATACACACACACACACACACACACACACA	<15>,<21>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,15,9,0:24:255,162,210,255,0,255,255,250,255,255	1/3:3,11,0,8:23:255,96,238,255,230,255,255,0,255,255	2/2:0,0,12,0:18:224,255,255,37,39,0,237,255,16,255
+chr21	32986251	chr21:32986251:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,7,4:12:255,69,37,124,0,102	0/1:8,6,1:17:132,0,199,84,207,255	1/2:0,7,4:12:255,67,35,121,0,99
+chr21	32999572	chr21:32999572:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,21:22:255,66,0	0/1:17,18:35:255,0,255	1/1:3,45:48:255,69,0
+chr21	32999586	chr21:32999586:M	ACACACACACACACACACACACACACACACACACTGCACACCACACACCACACACCACACACACAC	<28.5>,<29>,<30>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,3,8:12:255,230,207,139,129,105,62,26,0,29	1/3:0,7,0,9:17:255,222,185,236,144,189,184,0,86,146	2/3:0,0,10,7:21:255,255,217,120,89,59,209,84,0,158
+chr21	33001056	chr21:33001056:M	TTTTTTTTTTTTTTTTT	<13>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,9,0:30:255,164,191,255,0,255,255,249,255,255	2/3:2,0,12,10:25:255,255,255,143,255,232,185,255,0,255	1/2:2,16,12,0:35:255,186,255,255,0,255,255,255,255,255
+chr21	33002579	chr21:33002579:M	TTTATTTATTTATTT	<4.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:14,16:31:220,0,182	0/1:14,17:32:217,0,163	0/1:14,12:26:148,0,186
+chr21	33007081	chr21:33007081:M	TTTTTTTTTTTTTTTTT	<14>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,1,15,4:27:224,246,255,0,91,58,218,255,6,255	1/2:1,19,15,0:38:255,249,255,255,0,255,255,255,255,255	0/3:9,0,0,10:19:124,179,255,178,255,255,0,161,137,106
+chr21	33038352	chr21:33038352:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41,1:43:255,108,0,255,108,255	1/2:1,25,9:36:255,148,64,255,0,255	0/1:25,20,0:45:241,0,255,255,255,255
+chr21	33038431	chr21:33038431:M	TTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7,0:9:240,27,0,237,27,233	2/2:0,0,3:4:102,100,98,12,12,0	0/1:14,4,0:21:100,0,255,119,255,255
+chr21	33039575	chr21:33039575:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,36:40:255,255,255,98,111,0	1/2:2,16,14:37:255,211,255,255,0,255	0/2:21,0,16:39:174,255,255,0,255,255
+chr21	33045483	chr21:33045483:M	AAAAAGAAAAAGAAA	<22.5>	.	.	Motif=AAAAAG	GT:AD:DP:PL	0/1:24,11:37:32,0,255	0/0:26,6:33:0,21,255	0/0:30,10:45:0,1,255
+chr21	33045491	chr21:33045491:M	AAAGAAAGAAAGAGAGAGAGAGAAAGGAAGGACGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,11:11:115,29,0	1/1:0,6:6:63,16,0	1/1:0,10:10:105,26,0
+chr21	33049858	chr21:33049858:M	AAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,3:4:89,10,0	0/1:2,5:8:124,0,47
+chr21	33051155	chr21:33051155:M	TTTTGTTTTGTTTTGTTGTGTTTTGTTTTGTTTTGTTTTG	<4>,<6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,47,0:47:255,141,0,255,141,255	1/2:0,22,11:33:255,255,222,255,0,255	0/1:16,19,0:35:255,0,255,255,255,255
+chr21	33065862	chr21:33065862:M	AAAAAAAAAAAAGAGAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:35:0,102,255	0/0:29,1:32:0,76,255	0/1:17,25:44:255,0,185
+chr21	33065949	chr21:33065949:M	CACACACACACACACACACACACACACACACAC	<15.5>,<17.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,37,0:39:255,114,0,255,116,255	1/2:0,14,13:30:255,228,255,252,0,255	0/1:13,22,0:36:255,0,124,255,193,255
+chr21	33078677	chr21:33078677:M	AAAAGAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:37:255,71,0	1/1:1,29:31:255,73,0	0/1:18,19:38:235,0,225
+chr21	33080202	chr21:33080202:M	ATATATATATATTTTAATAAAATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/1:25,14:40:255,0,255	0/1:5,2:7:47,0,104	0/1:12,7:19:176,0,242
+chr21	33082426	chr21:33082426:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<10.7>,<15.7>	.	.	Motif=TTA	GT:AD:DP:PL	2/2:0,0,9:9:171,195,255,27,27,0	1/2:0,3,2:6:108,35,46,78,0,72	0/2:7,0,6:13:73,110,255,0,128,91
+chr21	33083496	chr21:33083496:M	TTTTTCTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:11:162,15,0	0/0:9,1:10:0,12,137	0/1:7,10:18:124,0,80
+chr21	33085354	chr21:33085354:M	CTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTTTCTCTCT	<19>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,15:16:255,47,0	0/1:15,23:38:255,0,163
+chr21	33087286	chr21:33087286:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,23:25:255,37,0	1/1:2,19:22:255,29,0	0/1:12,17:31:219,0,147
+chr21	33090078	chr21:33090078:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:30,0,137	0/0:7,0:10:0,26,143	0/1:15,2:20:12,0,204
+chr21	33091444	chr21:33091444:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:32,1:33:0,78,255	0/1:16,16:32:197,0,197	0/1:22,19:41:237,0,255
+chr21	33096191	chr21:33096191:M	TTTTTCTTTTTTTCTTTTTTTTTCTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:28:255,0,181	0/1:13,13:26:229,0,226	0/1:11,15:26:255,0,184
+chr21	33096218	chr21:33096218:M	TGTGGGTGTGTGTGTGTGTGTGTGTGTG	<15>	.	.	Motif=TG	GT:AD:DP:PL	1/1:3,36:40:255,64,0	1/1:2,31:36:255,71,0	1/1:1,28:30:255,70,0
+chr21	33096431	chr21:33096431:M	AAACAAAACAAACAAACAAA	<4>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:40,0:41:0,119,255	0/1:27,16:43:173,0,255
+chr21	33098011	chr21:33098011:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:2,1,18:21:255,255,255,26,43,0	1/2:2,6,10:19:255,103,139,65,0,50	0/2:7,1,12:20:167,157,255,0,103,63
+chr21	33102753	chr21:33102753:M	AAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAAAAAAA	<49>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:100,14,0	.	0/1:3,2:5:40,0,69
+chr21	33103773	chr21:33103773:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,7:11:147,111,149,63,0,71	2/2:1,1,9:11:114,127,202,5,3,0	2/2:1,1,9:12:128,141,221,7,5,0
+chr21	33103788	chr21:33103788:M	AGAGAGAGAGAGAGAGAGA	<10>,<11.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:3,10,5:19:113,59,37,41,0,199	1/2:0,8,17:28:255,255,228,58,0,90	0/2:13,6,6:26:70,52,78,0,44,255
+chr21	33105431	chr21:33105431:M	AAAAAAAAATAAAAAAATAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:1,19:20:255,41,0	0/1:19,15:34:179,0,254
+chr21	33107256	chr21:33107256:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:8:77,0,6	1/1:1,5:6:67,1,0	0/1:2,1:5:23,0,21
+chr21	33109001	chr21:33109001:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTT	<3.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,34:34:255,102,0	0/1:14,26:40:255,0,255
+chr21	33112851	chr21:33112851:M	AAAAAGAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:39:255,115,0	1/1:2,34:36:255,70,0	0/1:22,32:54:255,0,242
+chr21	33118875	chr21:33118875:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,25:28:255,29,0	1/1:2,21:27:255,33,0	0/1:10,8:21:107,0,113
+chr21	33119648	chr21:33119648:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:3,33:36:255,53,0	0/1:23,24:47:255,0,255
+chr21	33124517	chr21:33124517:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:230,40,0	0/1:4,9:15:119,0,35	0/1:12,3:15:8,0,166
+chr21	33126872	chr21:33126872:M	TTTTTTTTGTTTTTTGGTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:156,26,0	1/1:1,7:9:111,9,0	0/1:0,4:7:51,0,4
+chr21	33126916	chr21:33126916:M	TATATATATATATATATATGTATA	<11>,<19>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,18:20:255,255,255,60,60,0	2/2:0,0,8:8:215,215,215,24,24,0	1/2:0,11,6:18:255,151,119,169,0,245
+chr21	33129284	chr21:33129284:M	TTATTTTATTATTATTATTATTATTATTATTATTATTATT	<11.3>,<16.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,14,7:21:255,183,141,255,0,255	2/2:0,0,1:1:29,29,29,3,3,0	1/2:0,19,7:26:255,184,127,255,0,255
+chr21	33135339	chr21:33135339:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,13,18:36:255,255,255,193,0,255	0/2:15,0,9:26:194,228,255,0,255,255	1/1:0,36,0:37:255,109,0,255,108,255
+chr21	33138253	chr21:33138253:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:32:255,94,0	0/1:16,14:31:154,0,198	0/1:12,19:31:251,0,124
+chr21	33147645	chr21:33147645:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:38:192,0,255	0/1:11,7:18:69,0,139	0/0:34,1:36:0,88,255
+chr21	33148646	chr21:33148646:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAAAGAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:6:35,0,36	0/1:3,2:5:19,0,36	0/0:6,0:6:0,18,104
+chr21	33151782	chr21:33151782:M	GAAGGAAGGAAAGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGG	<3.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:3,14:21:255,0,53	0/1:1,8:11:189,0,10	0/1:3,15:19:255,0,25
+chr21	33153210	chr21:33153210:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:18:41,0,158	0/0:18,0:20:0,58,255	0/1:7,9:20:105,0,99
+chr21	33155034	chr21:33155034:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	<4.8>	.	.	Motif=AGGG	GT:AD:DP:PL	0/1:3,11:16:255,0,32	0/1:4,6:15:156,0,64	0/1:2,1:3:16,0,43
+chr21	33160384	chr21:33160384:M	ACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/1:30,19:50:255,0,255	0/0:52,0:52:0,156,255
+chr21	33161914	chr21:33161914:M	TCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	<24>,<29>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,8,8:17:255,209,184,219,0,195	0/1:6,7,0:13:163,0,137,181,155,255	0/2:7,0,9:16:205,229,255,0,180,151
+chr21	33164953	chr21:33164953:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,8:33:120,0,255	0/1:15,14:30:255,0,255	0/0:38,0:40:0,114,255
+chr21	33173737	chr21:33173737:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:6:0,15,84	0/0:1,0:1:0,3,16	0/1:6,3:9:23,0,72
+chr21	33179246	chr21:33179246:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:25:144,0,163	0/1:13,8:21:76,0,163	0/0:23,1:27:0,58,255
+chr21	33188370	chr21:33188370:M	TTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,11:27:223,0,255	0/1:13,7:21:139,0,255	0/1:20,5:28:64,0,255
+chr21	33191112	chr21:33191112:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,31:56:255,0,255	0/1:18,21:39:255,0,209	0/1:20,30:50:255,0,225
+chr21	33194740	chr21:33194740:M	AAAACAAAAAAAAAAAGGAAAAAGAAAAAGAAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:15:59,0,125	0/1:14,15:29:180,0,161	0/1:10,14:24:184,0,112
+chr21	33195716	chr21:33195716:M	AAAAAAGAAAAAAAAAAAAAGAAAGAAAAAGAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:124,0,89	0/1:11,10:21:107,0,124	0/1:6,16:23:210,0,47
+chr21	33205242	chr21:33205242:M	TTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:9:44,0,43	0/0:4,1:6:0,1,60	0/1:3,1:5:13,0,36
+chr21	33205385	chr21:33205385:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,4:11:76,0,148	1/1:0,4:4:108,12,0	0/0:8,0:10:0,24,226
+chr21	33217093	chr21:33217093:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:22:78,0,185	0/1:12,11:28:106,0,171	0/0:25,2:31:0,54,255
+chr21	33217359	chr21:33217359:M	AAAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,7:15:162,125,255,0,150,129	0/2:3,3,15:22:255,203,240,0,34,32	0/1:2,10,1:15:255,0,24,165,41,194
+chr21	33222102	chr21:33222102:M	TTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5,1:7:198,0,8,70,9,79	1/2:0,3,1:4:135,17,5,50,0,38	0/2:1,0,4:6:129,68,122,0,57,43
+chr21	33224958	chr21:33224958:M	TTTTTTTGTTTTTTTTTTTTCTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:31:0,57,255	0/0:28,1:31:0,47,255	0/1:10,10:29:196,0,229
+chr21	33226687	chr21:33226687:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:21:0,43,255	0/1:11,4:15:23,0,140	0/0:6,0:8:0,17,102
+chr21	33229879	chr21:33229879:M	CCCCGCCCCTGGCTCCGCCCCCGCCCCCGC	<2>	.	.	Motif=CCCCGC	GT:AD:DP:PL	0/1:11,4:15:57,0,220	0/1:24,4:28:18,0,255	0/1:18,10:28:174,0,255
+chr21	33231006	chr21:33231006:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:50:0,147,255	0/1:22,17:39:189,0,255	0/1:18,29:48:255,0,202
+chr21	33232655	chr21:33232655:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:31:150,0,255	0/1:11,8:20:156,0,238	0/0:53,0:54:0,159,255
+chr21	33234184	chr21:33234184:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0,0:22:0,66,255,66,255,255	0/1:11,8,0:21:161,0,255,130,255,255	0/2:12,0,7:22:141,115,255,0,255,255
+chr21	33237079	chr21:33237079:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<18>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/3:12,0,0,5:18:112,148,255,148,255,255,0,255,255,255	2/3:0,0,8,4:14:255,255,255,114,116,90,215,232,0,218	0/1:7,12,0,0:21:255,0,150,255,192,255,255,196,255,255
+chr21	33238775	chr21:33238775:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,18:42:214,0,255	0/1:21,12:35:111,0,255	0/1:26,21:48:255,0,255
+chr21	33240815	chr21:33240815:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,15,0:26:196,0,116,229,187,255	0/2:11,0,5:16:88,83,228,0,186,255	0/1:15,12,0:27:133,0,188,178,255,255
+chr21	33242753	chr21:33242753:M	GTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,4,7:12:255,177,162,119,0,98	1/2:0,2,5:7:184,129,123,55,0,40	1/1:0,9,0:10:255,30,0,255,30,255
+chr21	33246073	chr21:33246073:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:16,2:19:0,21,255	0/1:10,11:24:138,0,127
+chr21	33247255	chr21:33247255:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:53,0,213	0/0:8,1:10:0,6,192	.
+chr21	33249344	chr21:33249344:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5,0:6:128,0,11,87,25,99	0/1:2,6,0:8:146,0,33,99,49,131	1/2:0,6,6:14:255,103,66,110,0,76
+chr21	33252082	chr21:33252082:M	ATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<8.5>,<11.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:12,10,0:36:93,0,117,158,183,255	0/1:17,13,0:41:109,0,163,198,251,255	1/2:0,14,9:34:255,221,187,236,0,255
+chr21	33262764	chr21:33262764:M	CTCTCTCTCTCT	<7.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,25:30:255,14,0	1/1:0,32:38:255,3,0	0/1:11,13:25:169,0,152
+chr21	33262775	chr21:33262775:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:35:191,0,107	0/1:13,22:38:210,0,101	0/0:26,1:30:0,48,255
+chr21	33263855	chr21:33263855:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:14:54,0,89	0/1:7,7:17:82,0,94	1/1:1,15:18:255,34,0
+chr21	33267483	chr21:33267483:M	TTTTTTTTTTTGTTTGTTTGTTTTTTTGTTTTTTTGTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:58,0,3	1/1:0,9:9:156,26,0	0/1:1,4:6:61,0,1
+chr21	33269652	chr21:33269652:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:71,0,55	0/0:14,2:19:0,19,218	0/1:3,2:7:26,0,34
+chr21	33275148	chr21:33275148:M	TTTTCTTTTTTTTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,1,5:8:88,56,76,10,0,6	1/2:0,4,5:10:183,70,55,76,0,50	2/2:1,0,11:13:174,167,190,18,26,0
+chr21	33277335	chr21:33277335:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:24:255,63,0	1/1:1,11:15:255,9,0	1/1:1,21:26:255,41,0
+chr21	33277644	chr21:33277644:M	TTTTCTTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTT	<48>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:189,21,0	0/1:1,1:4:21,0,20	1/1:0,5:6:131,15,0
+chr21	33287342	chr21:33287342:M	GTTTGTTTGTTT	<4>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:15,17:32:234,0,196	0/1:20,14:34:153,0,255	1/1:0,40:40:255,118,0
+chr21	33288382	chr21:33288382:M	CACACACACACACACACACACACAGACAC	<12.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,11:24:239,0,198	0/1:9,7:19:165,0,180	1/1:0,26:27:255,78,0
+chr21	33293807	chr21:33293807:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,87,0	1/1:0,31:37:255,101,0	0/1:10,24:34:255,0,160
+chr21	33294370	chr21:33294370:M	TGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,10:19:112,0,88	0/1:13,9:22:80,0,144	0/1:11,12:23:130,0,113
+chr21	33295672	chr21:33295672:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,10:28:255,107,111,233,0,188	1/2:1,2,8:11:138,90,109,16,0,0	0/1:0,8,1:14:216,0,6,136,17,139
+chr21	33296954	chr21:33296954:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:15:255,45,0	1/1:0,8:12:243,30,0	0/1:9,11:24:245,0,194
+chr21	33297431	chr21:33297431:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:26,19:49:186,0,255	0/0:43,1:46:0,117,255	0/1:16,14:30:142,0,175
+chr21	33300442	chr21:33300442:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11,0:19:248,0,145,180,122,255	1/2:0,14,15:30:255,200,155,230,0,148	0/0:33,0,2:35:0,99,255,69,255,255
+chr21	33303351	chr21:33303351:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:9:146,0,15	0/1:1,2:5:58,0,28	0/1:2,1:4:21,0,50
+chr21	33319699	chr21:33319699:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,8:33:49,0,255	0/0:26,2:36:0,62,255	0/1:14,15:33:179,0,142
+chr21	33322075	chr21:33322075:M	ATATACATATGGAATATACATATA	<1.8>	.	.	Motif=ATATAC	GT:AD:DP:PL	0/0:24,2:26:0,22,255	0/0:19,2:21:0,7,255	1/1:0,26:26:255,78,0
+chr21	33322236	chr21:33322236:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,6:39:0,41,255	0/0:16,2:19:0,30,255	0/1:12,9:22:48,0,255
+chr21	33322290	chr21:33322290:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,6:44:0,58,255	0/0:14,2:16:0,23,255	0/1:17,9:26:34,0,255
+chr21	33322318	chr21:33322318:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:41,6:47:0,67,255	0/0:12,2:14:0,17,255	0/1:16,9:25:37,0,255
+chr21	33322939	chr21:33322939:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,5:45:0,73,255	0/0:6,1:7:0,9,150	0/1:6,11:17:86,0,122
+chr21	33322967	chr21:33322967:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:39,5:44:0,70,255	0/0:6,1:7:0,9,150	0/1:12,11:23:68,0,255
+chr21	33322995	chr21:33322995:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:47,5:52:0,94,255	0/0:6,1:7:0,9,150	0/1:18,11:29:50,0,255
+chr21	33323023	chr21:33323023:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:45,5:50:0,88,255	0/0:6,1:7:0,9,150	0/1:19,11:30:47,0,255
+chr21	33323051	chr21:33323051:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,5:43:0,67,255	0/0:4,1:5:0,3,98	0/1:15,11:26:59,0,255
+chr21	33323079	chr21:33323079:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:2,5:7:41,0,36	1/1:0,1:1:12,3,0	1/1:0,11:11:134,30,0
+chr21	33323107	chr21:33323107:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,5:8:38,0,61	0/1:1,1:2:6,0,22	1/1:0,10:10:122,28,0
+chr21	33326213	chr21:33326213:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:20:255,0,152	0/1:8,13:24:255,0,171	0/1:9,14:25:255,0,184
+chr21	33326786	chr21:33326786:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:43:0,125,255	0/0:38,0:38:0,110,255	0/1:13,24:37:255,0,105
+chr21	33333615	chr21:33333615:M	TTTTTTTTTTTCTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:8:0,23,134	0/1:3,2:6:15,0,42	0/1:5,4:9:39,0,55
+chr21	33335916	chr21:33335916:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:24:142,0,107	0/1:11,7:18:60,0,124	0/1:12,13:25:142,0,125
+chr21	33336748	chr21:33336748:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:40,1,0	1/1:1,5:6:64,1,0	0/1:3,4:8:53,0,26
+chr21	33337628	chr21:33337628:M	ATATATACACTATATATATACATACTGTATATATA	<16.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,13:25:147,0,126	0/1:20,16:36:155,0,214	0/1:19,18:37:192,0,202
+chr21	33338532	chr21:33338532:M	AAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:198,24,0	1/1:0,9:11:243,23,0	0/1:12,5:19:81,0,255
+chr21	33339928	chr21:33339928:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,3:5:40,34,56,0,8,5	0/1:2,5,0:7:121,0,36,81,32,94	0/2:2,1,6:9:86,67,116,0,17,8
+chr21	33342689	chr21:33342689:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:24,0,96	0/0:5,0:7:0,20,108	0/0:6,0:8:0,21,118
+chr21	33344162	chr21:33344162:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,26:45:255,0,227	0/1:23,22:47:255,0,255	0/1:21,27:49:255,0,253
+chr21	33344761	chr21:33344761:M	TTTACTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.8>,<13.8>,<14.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/3:0,15,0,10:25:255,255,227,255,183,255,255,0,255,255	1/3:0,1,0,2:3:84,55,51,52,35,44,27,0,17,21	2/3:0,0,7,8:15:255,255,255,145,144,102,127,108,0,84
+chr21	33347132	chr21:33347132:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:22:121,0,123	0/1:6,9:17:127,0,55	0/1:6,8:17:105,0,76
+chr21	33360397	chr21:33360397:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,4:35:0,29,255	0/0:29,0:32:0,93,255	0/1:15,16:32:196,0,186
+chr21	33367887	chr21:33367887:M	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTCTTTTCTCTTCTTTTCTTTT	<12.6>	.	.	Motif=TCTTT	GT:AD:DP:PL	0/1:5,9:14:132,0,55	0/1:7,5:12:55,0,92	0/1:7,5:12:58,0,96
+chr21	33368257	chr21:33368257:M	TGTGTGTGTGTGTGTGTGTG	<9>	.	.	Motif=TG	GT:AD:DP:PL	0/0:45,1:46:0,117,255	0/0:41,1:43:0,108,255	0/1:15,13:29:167,0,194
+chr21	33371123	chr21:33371123:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,22:36:255,0,157	1/1:1,29:31:255,73,0	0/1:16,16:33:196,0,205
+chr21	33372253	chr21:33372253:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:7:33,0,35	0/0:1,0:2:0,5,26	0/1:1,2:3:26,0,8
+chr21	33373135	chr21:33373135:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:35,0,128	0/1:10,4:14:29,0,134	0/0:15,0:18:0,52,255
+chr21	33373435	chr21:33373435:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:28:0,81,255	0/1:7,4:14:87,0,155	0/0:14,0:17:0,45,255
+chr21	33379468	chr21:33379468:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:22:0,45,255	0/1:6,7:15:78,0,77	0/0:16,1:19:0,37,255
+chr21	33382245	chr21:33382245:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/1:18,11:30:109,0,234	0/0:27,1:28:0,64,255
+chr21	33384083	chr21:33384083:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,6,57	1/1:0,7:7:196,21,0	.
+chr21	33384265	chr21:33384265:M	GTTTTTTGTTTGTTGGTTGGTTTGTTTGTTTGTTT	<4.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:20,7:27:107,0,255	0/0:28,2:32:0,35,255	0/0:18,2:20:0,5,255
+chr21	33385978	chr21:33385978:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/1:17,9:27:81,0,222	0/0:18,0:19:0,55,255
+chr21	33388953	chr21:33388953:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,15,143	0/1:5,7:13:164,0,100	0/0:7,0:7:0,21,196
+chr21	33392702	chr21:33392702:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<12>	.	.	Motif=GT	GT:AD:DP:PL	0/0:16,0:18:0,50,255	0/1:8,8:17:98,0,81	0/0:23,0:25:0,73,255
+chr21	33398652	chr21:33398652:M	TGTGATGTGATGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:15,0:18:0,43,255	0/1:4,8:14:212,0,99	0/0:13,1:14:0,9,255
+chr21	33401595	chr21:33401595:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAATAAATAA	<14.8>,<15.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:3,5,0:8:73,0,35,82,57,162	1/1:0,6,0:6:109,18,0,109,18,109	0/2:9,0,5:15:102,92,229,0,173,229
+chr21	33405104	chr21:33405104:M	AAAAAAAAAAAAAAAAAAAAGAAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,2:11:4,31,255,0,160,130	0/1:1,11,1:15:255,0,12,170,19,168	0/2:6,0,3:10:24,44,210,0,113,88
+chr21	33406649	chr21:33406649:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,4:34:0,27,255	0/1:14,7:21:58,0,177	0/0:24,1:27:0,61,255
+chr21	33410167	chr21:33410167:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:17:87,0,115	1/1:2,22:26:255,41,0	0/0:14,0:15:0,41,250
+chr21	33416822	chr21:33416822:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:254,41,0	1/1:1,11:12:173,18,0	0/1:5,12:17:163,0,39
+chr21	33419460	chr21:33419460:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:25,13:39:134,0,255	0/1:25,24:50:255,0,255	0/0:42,0:42:0,124,255
+chr21	33421332	chr21:33421332:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,5:10:45,0,34	0/1:3,6:10:67,0,14	0/0:7,2:13:0,4,101
+chr21	33423829	chr21:33423829:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,0,14:24:255,253,255,0,182,219	1/2:0,17,7:25:255,129,60,249,0,226	0/1:16,14,1:32:171,0,208,196,255,255
+chr21	33428210	chr21:33428210:M	TTTTTTTTTTTTTTTT	<14>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,0,6:23:107,159,255,0,255,255	0/2:8,0,7:18:151,186,255,0,210,181	0/1:14,16,0:34:255,0,255,255,255,255
+chr21	33433790	chr21:33433790:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:4,24:30:255,16,0	0/1:21,21:44:255,0,255
+chr21	33437983	chr21:33437983:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,6:22:41,0,218	0/0:15,2:18:0,16,219	0/1:13,6:20:45,0,176
+chr21	33438732	chr21:33438732:M	TTTTTTTTTTTCTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,30:34:255,80,0	1/1:1,23:24:255,53,0	0/1:22,16:38:181,0,255
+chr21	33442012	chr21:33442012:M	TTTGTTTGCTTGTTTGTTTG	<4>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,40:40:255,118,0	0/1:20,26:46:255,0,239
+chr21	33442921	chr21:33442921:M	AAAAAAAAAAACAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:1,37:40:255,99,0	0/1:27,24:51:255,0,255
+chr21	33443893	chr21:33443893:M	TTTTTTTTTGTTTGTTTGTTTGTTTTTTT	<22>,<30>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,17:35:255,255,255,255,0,255	2/2:0,0,29:29:255,255,255,85,87,0	0/1:18,23,0:41:255,0,255,255,255,255
+chr21	33444804	chr21:33444804:M	AAAAAAAAAAAAAAAAAGAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:2:14,3,0	1/1:0,3:3:84,9,0	0/0:4,0:4:0,12,119
+chr21	33445084	chr21:33445084:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,2:16:0,12,207	0/1:7,3:12:34,0,82	0/0:14,0:14:0,41,237
+chr21	33445787	chr21:33445787:M	AAAAAAAAAAGGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:31:186,0,204	0/0:27,0:29:0,84,255	0/1:16,24:41:255,0,178
+chr21	33446214	chr21:33446214:M	TTTTTCTTTTATTTTTTTTATTTTTTATTTTTTATTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:207,0,255	0/1:6,12:20:255,0,108	0/0:32,0:34:0,101,255
+chr21	33446636	chr21:33446636:M	ACACACACACACACACACACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,3:16:8,0,189	0/1:13,5:18:37,0,180	0/0:17,1:19:0,38,255
+chr21	33447144	chr21:33447144:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,19:23:255,30,0	1/1:2,21:23:255,32,0	0/1:18,12:32:123,0,247
+chr21	33447682	chr21:33447682:M	ACACACACACACACACACACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,24,13:39:255,177,68,255,0,187	0/2:12,0,12:27:255,153,255,0,255,255	0/1:12,7,0:24:140,0,255,67,255,255
+chr21	33447720	chr21:33447720:M	ATATATATATATA	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,2:2:49,6,0	1/1:0,3:4:99,12,0	0/0:23,1:25:0,50,255
+chr21	33454103	chr21:33454103:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,3:5:103,52,38,30,0,21	0/1:2,5,1:8:71,0,10,53,17,99	0/1:3,4,0:7:49,0,31,58,51,131
+chr21	33457652	chr21:33457652:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:17:234,31,0	1/1:1,12:15:207,26,0	0/1:9,7:17:84,0,107
+chr21	33459668	chr21:33459668:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:16:177,0,8	1/1:0,9:9:154,26,0	0/1:13,6:22:60,0,176
+chr21	33464199	chr21:33464199:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:27:141,0,186	0/0:26,0:28:0,81,255	1/1:0,13:14:242,41,0
+chr21	33464805	chr21:33464805:M	AAAAAAAAAAAAAAAAAAAACAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:24:255,72,0	1/1:0,29:29:255,87,0	0/1:1,6:9:146,0,7
+chr21	33466781	chr21:33466781:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,50:50:255,148,0	1/1:1,36:37:255,91,0	0/1:16,31:47:255,0,161
+chr21	33472030	chr21:33472030:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:38:0,94,255	0/0:23,0:24:0,69,255	0/1:16,11:30:82,0,177
+chr21	33473458	chr21:33473458:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,1,5:13:64,80,213,0,75,84	0/2:10,2,3:19:35,36,201,0,100,146	0/1:8,4,0:13:46,0,105,81,120,240
+chr21	33473655	chr21:33473655:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:27:0,62,255	0/0:20,2:23:0,33,255	0/1:14,14:33:180,0,167
+chr21	33476761	chr21:33476761:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:53,9,0	1/1:0,4:5:66,11,0	0/1:2,2:5:20,0,30
+chr21	33483226	chr21:33483226:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:36,0,29	0/1:8,3:12:26,0,101	0/1:5,4:9:43,0,61
+chr21	33485003	chr21:33485003:M	TTGTTGTTGTTGTTGTTGTTGTT	<8.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:17,11:28:129,0,247	0/1:11,22:33:255,0,103	0/0:24,0:24:0,71,255
+chr21	33486707	chr21:33486707:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/1:9,7:17:70,0,113	0/0:18,3:24:0,16,255
+chr21	33492341	chr21:33492341:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:12:148,90,114,82,0,99	1/2:0,7,2:11:146,34,25,137,0,191	0/1:5,6,0:12:83,0,55,114,76,238
+chr21	33493267	chr21:33493267:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:2,31:34:255,64,0	0/1:24,18:42:204,0,255
+chr21	33494494	chr21:33494494:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:110,0,13	1/1:0,3:5:87,2,0	1/1:0,2:4:82,12,0
+chr21	33494613	chr21:33494613:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:12:11,0,118	0/1:10,5:19:58,0,127	0/0:20,2:24:0,32,255
+chr21	33496461	chr21:33496461:M	CTCTCTCTCTCTC	<7.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:22,16:39:193,0,255	0/1:17,8:25:72,0,235	0/1:16,13:29:159,0,216
+chr21	33498801	chr21:33498801:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:32:153,0,191	0/1:11,9:25:89,0,153	0/1:9,14:26:174,0,99
+chr21	33499432	chr21:33499432:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,12:31:255,218,131,255,0,237	1/2:0,14,5:21:255,87,26,255,0,207	0/1:8,12,0:23:255,0,182,219,209,255
+chr21	33499903	chr21:33499903:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:11:7,0,116	0/1:11,5:19:50,0,144	0/0:20,1:24:0,52,255
+chr21	33503184	chr21:33503184:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATT	<7.2>,<10.2>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:12,0,10:22:130,192,255,0,230,169	1/2:0,16,4:20:255,72,59,255,0,255	0/0:24,0,0:25:0,72,255,74,255,255
+chr21	33503371	chr21:33503371:M	TTTTTTTTTTTTTTTTTTTTT	<15>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,2:18:255,35,2,255,0,255	1/2:0,5,3:9:177,50,58,134,0,126	0/1:4,12,0:16:255,0,67,255,70,255
+chr21	33512290	chr21:33512290:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:9:98,0,1	0/1:3,2:5:19,0,36	0/1:4,4:10:63,0,40
+chr21	33513084	chr21:33513084:M	TGTGTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:5,4:12:90,0,113	0/1:6,8:16:174,0,138	0/1:5,7:13:163,0,99
+chr21	33516247	chr21:33516247:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:87,15,0	0/1:2,4:8:52,0,20	1/1:0,4:4:68,12,0
+chr21	33519553	chr21:33519553:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:14:101,0,48	0/0:13,2:16:0,4,177	0/1:3,8:12:103,0,26
+chr21	33519824	chr21:33519824:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:25:255,72,0	1/1:1,27:32:255,75,0	1/1:1,19:21:255,43,0
+chr21	33523968	chr21:33523968:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,0:2:5,0,5	0/0:3,0:4:0,11,61	0/1:4,3:7:30,0,47
+chr21	33528612	chr21:33528612:M	AAAAAAGAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:28:145,0,183	0/1:17,5:24:27,0,234	0/1:16,14:30:161,0,197
+chr21	33528757	chr21:33528757:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,21:35:255,0,98	0/0:24,2:26:0,42,255	0/1:10,12:28:156,0,127
+chr21	33529451	chr21:33529451:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:22,0,84	0/0:11,2:13:0,4,151	0/0:11,0:12:0,35,202
+chr21	33531570	chr21:33531570:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,6:24:25,0,126	0/1:15,4:28:6,0,139	0/0:19,3:26:0,14,202
+chr21	33533439	chr21:33533439:M	AAAAAAAAAAAAATAAATAAATAAATAAAAATAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2:9:12,0,54	0/1:2,7:10:65,0,1	0/1:6,3:10:14,0,53
+chr21	33538242	chr21:33538242:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:32,0,41	0/1:5,2:9:19,0,60	0/1:4,2:6:16,0,50
+chr21	33543531	chr21:33543531:M	CCCCTCCCCCTC	<2.2>	.	.	Motif=CCCCTC	GT:AD:DP:PL	1/1:0,37:37:255,102,0	1/1:0,31:31:255,86,0	1/1:0,36:36:255,100,0
+chr21	33547706	chr21:33547706:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:149,15,0	0/1:1,2:4:55,0,23	.
+chr21	33547891	chr21:33547891:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,11,13:26:255,190,180,195,0,143	1/2:0,14,17:34:255,254,204,255,0,185	0/1:16,15,1:32:255,0,255,255,255,255
+chr21	33549082	chr21:33549082:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,16:31:197,0,180	0/0:27,2:30:0,53,255	0/1:14,13:29:154,0,172
+chr21	33555095	chr21:33555095:M	GCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGC	<3.8>,<7.3>	.	.	Motif=GCCGCA	GT:AD:DP:PL	1/2:1,6,12:19:255,239,244,120,0,107	1/2:0,7,5:12:255,113,92,149,0,134	1/2:1,11,4:16:255,65,56,226,0,237
+chr21	33556712	chr21:33556712:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,11:21:149,0,85	0/1:7,4:12:43,0,85	0/1:12,8:23:85,0,156
+chr21	33558960	chr21:33558960:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:2:19,3,0	1/1:0,3:3:51,9,0	1/1:0,3:3:52,9,0
+chr21	33564862	chr21:33564862:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:9:79,0,19	0/0:2,0:2:0,6,33	0/0:2,0:3:0,9,46
+chr21	33572169	chr21:33572169:M	TATATTATATATTTATATATATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,19:19:255,56,0	1/1:0,3:3:53,9,0	1/1:0,16:17:255,47,0
+chr21	33577605	chr21:33577605:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<24>,<34>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,4:8:121,121,121,14,14,0	2/2:0,0,3:5:94,94,94,12,12,0	1/1:0,8,0:11:255,30,0,255,30,255
+chr21	33580240	chr21:33580240:M	ATGAATGAATGAATGAATGAATGAATGAATG	<6.8>	.	.	Motif=ATGA	GT:AD:DP:PL	0/1:10,13:23:183,0,126	0/1:12,8:20:86,0,159	0/1:8,12:20:167,0,92
+chr21	33583201	chr21:33583201:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:171,21,0	1/1:0,3:4:88,10,0	0/0:1,0:1:0,3,27
+chr21	33584015	chr21:33584015:M	TATATATATATATATATATATATATATATATA	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:16:254,5,0	1/1:0,3:5:98,13,0	0/1:2,8:13:204,0,29
+chr21	33585388	chr21:33585388:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:8:31,0,58	0/0:6,1:7:0,3,86	0/1:2,3:7:33,0,33
+chr21	33594639	chr21:33594639:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:7:42,0,32	0/0:4,0:5:0,3,56	0/1:2,2:6:28,0,27
+chr21	33597615	chr21:33597615:M	TTTTTGTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:255,0,255	0/1:18,10:28:202,0,255	0/1:21,11:32:225,0,255
+chr21	33599639	chr21:33599639:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,128,0	1/1:0,43:44:255,128,0	1/1:1,38:40:255,100,0
+chr21	33604529	chr21:33604529:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,11:12:181,17,0	1/1:2,9:13:138,3,0	0/1:7,7:16:95,0,78
+chr21	33615155	chr21:33615155:M	TTTTTTTTTTTTTTTTTT	<15>,<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,10,1:24:255,182,127,230,0,164,255,135,213,255	1/2:0,15,9,0:25:255,156,82,255,0,198,255,130,255,255	2/3:1,1,10,4:16:255,213,255,42,67,40,175,131,0,148
+chr21	33618289	chr21:33618289:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:5:0,15,86	0/1:3,3:8:32,0,33	0/1:7,2:10:8,0,93
+chr21	33627740	chr21:33627740:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:11:49,0,45	0/1:2,3:6:44,0,16	0/1:2,4:7:60,0,15
+chr21	33628604	chr21:33628604:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:28:255,79,0	1/1:0,27:29:255,84,0	1/1:1,23:26:255,59,0
+chr21	33629067	chr21:33629067:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:30:255,70,0	1/1:1,22:26:255,58,0	1/1:0,27:28:255,82,0
+chr21	33634881	chr21:33634881:M	ATATATATATATATATATATATATA	<10.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,15,12:28:255,169,150,254,0,194	1/2:0,3,3:6:122,44,35,52,0,35	1/2:0,22,12:35:255,182,113,255,0,255
+chr21	33635347	chr21:33635347:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:53,9,0	1/1:1,5:8:91,6,0	1/1:1,6:8:98,6,0
+chr21	33637761	chr21:33637761:M	ATATATATATATATATATATATATATATA	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:33,0:38:0,101,255	0/1:5,8:17:217,0,65	0/0:20,1:24:0,41,255
+chr21	33637789	chr21:33637789:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:41,2:43:0,86,255	0/1:7,12:21:208,0,99	0/1:13,5:23:56,0,238
+chr21	33638211	chr21:33638211:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:11:0,15,159	0/1:2,3:7:41,0,24	0/1:4,4:9:43,0,51
+chr21	33639826	chr21:33639826:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,7,1,3:12:218,119,138,175,46,236,126,0,190,213	1/2:0,12,7,1:22:255,130,163,229,0,255,255,104,255,255	0/0:9,0,0,0:9:0,26,163,26,163,163,27,187,187,255
+chr21	33644828	chr21:33644828:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,17:44:191,0,255	0/1:17,8:26:66,0,236	0/1:21,19:42:236,0,255
+chr21	33650031	chr21:33650031:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:31:0,74,255	0/1:9,3:12:9,0,97	0/0:24,0:25:0,71,255
+chr21	33655584	chr21:33655584:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,146	0/0:1,0:3:0,6,41	0/1:2,3:9:81,0,40
+chr21	33659706	chr21:33659706:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,4:6:94,0,13
+chr21	33669443	chr21:33669443:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,12:27:152,0,156	0/1:10,4:15:35,0,130	0/1:18,8:28:70,0,255
+chr21	33677343	chr21:33677343:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,79,255	0/0:29,1:32:0,76,255	0/1:20,7:28:42,0,255
+chr21	33681616	chr21:33681616:M	TTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTGTTTTGTTTTTGTTTT	<53>,<68>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,0,5:12:110,131,255,0,183,168	0/2:1,0,2:3:49,52,78,0,26,20	0/1:8,5,0:13:103,0,194,127,209,255
+chr21	33687231	chr21:33687231:M	AAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,15:32:185,0,223	0/1:12,17:29:215,0,127	0/0:28,1:29:0,67,255
+chr21	33687399	chr21:33687399:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,3,29	0/0:0,0:1:0,0,0	0/1:1,3:5:79,0,14
+chr21	33689968	chr21:33689968:M	AAAAAAAAAAAAAAATAATTAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,1:17:0,32,255	0/0:10,0:11:0,32,179	0/1:14,14:29:159,0,168
+chr21	33690600	chr21:33690600:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:26:170,0,170	0/1:19,8:27:63,0,255	0/0:26,0:26:0,77,255
+chr21	33697235	chr21:33697235:M	TTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:13:255,36,0	1/1:0,4:4:111,12,0	0/1:3,1:6:16,0,69
+chr21	33700952	chr21:33700952:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,12:24:255,255,255,201,0,255	1/2:0,9,7:19:255,179,169,153,0,224	1/2:0,11,7:18:255,180,152,187,0,255
+chr21	33703084	chr21:33703084:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,19,9:28:255,162,82,255,0,255	1/2:0,11,11:22:255,189,126,160,0,127	0/1:10,11,0:21:135,0,117,165,176,255
+chr21	33705111	chr21:33705111:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:14:55,0,99	0/0:7,1:9:0,9,110	0/0:3,0:3:0,9,51
+chr21	33711646	chr21:33711646:M	TGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGT	<23.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,18:29:255,255,239,175,0,97	0/1:6,9,0:16:223,0,122,160,100,220	0/2:9,1,10:20:128,130,255,0,138,99
+chr21	33713829	chr21:33713829:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,3:5:45,0,3
+chr21	33714623	chr21:33714623:M	TATATCTATATCTATATCTATA	<2.7>	.	.	Motif=TATATC	GT:AD:DP:PL	1/1:0,47:47:255,137,0	1/1:0,35:35:255,102,0	1/1:0,44:44:255,128,0
+chr21	33717730	chr21:33717730:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,6:23:51,0,243	0/1:16,20:37:255,0,183	0/1:24,18:42:213,0,255
+chr21	33724084	chr21:33724084:M	TGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGT	<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,17:30:255,255,239,177,0,153	1/2:1,17,14:32:255,232,159,240,0,224	0/1:23,16,0:40:182,0,255,254,255,255
+chr21	33725121	chr21:33725121:M	TTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTT	<30>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6,0:10:149,24,0,169,29,218	1/1:0,11,0:17:255,46,0,255,50,255	1/2:3,4,5:16:84,15,117,72,0,118
+chr21	33741895	chr21:33741895:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:7:86,0,60	0/1:7,3:10:45,0,158	0/0:5,0:7:0,17,145
+chr21	33748990	chr21:33748990:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:25:255,72,0	1/1:3,33:39:255,61,0	0/1:8,12:22:163,0,82
+chr21	33752825	chr21:33752825:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,13:31:140,0,230	0/1:12,12:27:134,0,145	0/0:38,1:40:0,99,255
+chr21	33763230	chr21:33763230:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:5:6,0,24	0/1:1,5:8:41,0,13	0/0:3,1:5:0,0,31
+chr21	33769700	chr21:33769700:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:34:198,0,225	0/1:17,21:38:255,0,187	0/0:33,1:35:0,84,255
+chr21	33770765	chr21:33770765:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,6:14:68,107,255,0,122,104	0/1:6,3,2:12:28,0,89,25,53,127	0/0:24,1,2:27:0,61,255,44,255,255
+chr21	33776387	chr21:33776387:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,13:32:147,0,213	0/1:10,5:18:38,0,133	0/1:16,6:24:45,0,219
+chr21	33776545	chr21:33776545:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:18:109,0,84	0/1:6,6:14:74,0,63	0/0:15,0:15:0,44,255
+chr21	33783692	chr21:33783692:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:30:122,0,223	0/1:8,13:23:178,0,71	0/1:21,10:32:94,0,255
+chr21	33784311	chr21:33784311:M	ACACACACACACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,17:29:255,0,218	0/1:7,13:21:255,0,129	0/1:6,15:23:255,0,106
+chr21	33795951	chr21:33795951:M	TTTTTTTTTTTTTTTTAATTTTTTATTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:255,209,182,30,29,0	1/2:2,7,15:24:255,221,189,67,0,73	1/2:0,8,5:13:247,88,51,119,0,104
+chr21	33798265	chr21:33798265:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,16:36:201,0,239	0/1:14,9:24:88,0,186	0/0:30,0:31:0,91,255
+chr21	33806048	chr21:33806048:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:112,12,0	0/1:12,5:19:87,0,255	0/1:10,5:17:93,0,237
+chr21	33813755	chr21:33813755:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/1:20,21:43:254,0,236	0/0:47,0:48:0,141,255
+chr21	33813824	chr21:33813824:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,8:25:74,0,239	0/1:13,12:25:136,0,153	0/0:38,1:41:0,99,255
+chr21	33840358	chr21:33840358:M	TTTTTTGTTTTTTAATTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:18,17:35:203,0,218	0/0:35,0:35:0,103,255
+chr21	33841938	chr21:33841938:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,3:4:42,53,90,0,15,6	1/2:1,6,3:13:125,51,73,87,0,137	0/0:14,1,1:16:0,29,240,29,219,240
+chr21	33842496	chr21:33842496:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:8,0,14:24:255,255,255,0,210,160	1/2:0,11,13:27:255,255,255,255,0,255	0/0:21,0,0:23:0,69,255,63,255,255
+chr21	33862165	chr21:33862165:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:29,3,0	1/1:0,0:2:28,6,0	1/1:0,4:7:131,16,0
+chr21	33867639	chr21:33867639:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:21:255,58,0	1/1:0,12:15:255,41,0	1/1:0,21:24:255,68,0
+chr21	33871430	chr21:33871430:M	AAAAAAACAAAAAAAAAAACAAAAAACAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,34:34:255,102,0	1/1:0,32:33:255,99,0
+chr21	33871740	chr21:33871740:M	AAAAAAAAAAAAAGAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,54:55:255,164,0	1/1:0,33:34:255,99,0	1/1:0,36:38:255,113,0
+chr21	33874157	chr21:33874157:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:51,9,0	1/1:0,3:3:49,9,0	0/1:2,3:6:35,0,19
+chr21	33874640	chr21:33874640:M	TTTTCTTTTTCTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:175,18,0	1/1:0,8:10:239,24,0	1/1:0,8:9:232,24,0
+chr21	33876234	chr21:33876234:M	TCTCTCTCTCTTTCTTCTCCTTCCTTCCTCTCTTCTTTTTCTCTCTTTCTTTCCTTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,18:18:255,54,0	1/1:0,27:27:255,81,0
+chr21	33876883	chr21:33876883:M	AGATATAGATATAGATGTAGATATAGATATAGATATAGA	<7.5>	.	.	Motif=AGATAT	GT:AD:DP:PL	1/1:0,16:16:255,47,0	1/1:0,20:20:255,59,0	1/1:0,24:24:255,71,0
+chr21	33877826	chr21:33877826:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,40:41:255,123,0	1/1:0,39:39:255,117,0	1/1:0,37:39:255,116,0
+chr21	33878009	chr21:33878009:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,9:23:255,102,34,153,0,86	1/2:0,11,28:39:255,255,187,128,0,11	1/2:0,16,12:30:255,135,46,195,0,108
+chr21	33881946	chr21:33881946:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:9:158,26,0	0/1:4,5:10:64,0,39	0/1:2,6:8:80,0,11
+chr21	33887320	chr21:33887320:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,39:43:255,117,0	0/1:15,22:38:255,0,171
+chr21	33887587	chr21:33887587:M	TTTTTTCTTTTTATTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:37:255,80,0	1/1:0,28:32:255,80,0	0/1:19,16:35:143,0,188
+chr21	33887944	chr21:33887944:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:26:255,58,0	1/1:0,43:43:255,126,0	0/1:24,21:46:243,0,255
+chr21	33895494	chr21:33895494:M	TGTGTGTGCGTGCGCGTGTTTGTGTGTGCATGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,14:14:242,41,0	0/1:12,7:19:70,0,155
+chr21	33908170	chr21:33908170:M	AAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:117,0,13	1/1:0,4:6:144,18,0	0/0:3,0:4:0,12,101
+chr21	33911663	chr21:33911663:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:2:0,1,2	0/1:7,3:10:20,0,86	0/0:1,0:3:0,6,27
+chr21	33914164	chr21:33914164:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,20:43:248,0,255	1/1:4,42:47:255,67,0	0/0:44,0:45:0,132,255
+chr21	33918442	chr21:33918442:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,22:38:255,0,142	1/1:0,32:33:255,97,0	0/0:25,2:27:0,43,255
+chr21	33921263	chr21:33921263:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:7,0,35	0/1:2,4:8:58,0,24	0/0:9,0:9:0,26,159
+chr21	33921419	chr21:33921419:M	AAAAAAAAAAAAAAAAAAACAAAAAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:10:50,0,57	1/1:0,11:13:201,37,0	0/0:6,0:6:0,18,102
+chr21	33925237	chr21:33925237:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:29:178,0,198	0/0:27,0:27:0,79,255	1/1:0,24:25:255,73,0
+chr21	33938189	chr21:33938189:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:8:166,45,30,87,0,65	2/2:1,1,6:8:95,74,95,6,6,0	1/2:1,6,5:12:196,56,63,85,0,69
+chr21	33940587	chr21:33940587:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:43:255,0,211	0/0:46,5:51:0,62,255	1/1:0,39:40:255,117,0
+chr21	33944306	chr21:33944306:M	AAAAAAAAAAAACAAAAAGAAAAAGAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8:18:95,0,132	0/1:9,8:19:87,0,115	1/1:0,30:30:255,88,0
+chr21	33945707	chr21:33945707:M	AAAAAAATAGAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:15:71,0,90	1/1:0,11:12:197,35,0	0/0:16,2:19:0,21,253
+chr21	33946576	chr21:33946576:M	TCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,18:34:134,0,108	0/1:14,15:29:106,0,93	1/1:2,32:34:255,69,0
+chr21	33952629	chr21:33952629:M	AAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:55,40,35,6,6,0	0/2:1,1,4:6:108,50,62,0,9,11	1/2:0,4,10:15:255,179,140,70,0,26
+chr21	33956189	chr21:33956189:M	AAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,3:9:162,52,65,85,0,104	1/2:0,1,4:8:153,125,121,28,0,8	2/2:0,0,7:7:208,208,208,21,21,0
+chr21	33956225	chr21:33956225:M	ACACACACACACACACACACACACACACACACACACACACGCACA	<20.5>,<21.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,12,5:18:255,255,255,141,141,106,209,209,0,255	0/3:8,0,1,5:14:111,135,255,120,252,228,0,202,116,202	1/2:0,12,6,0:18:255,88,52,206,0,156,255,104,207,255
+chr21	33960271	chr21:33960271:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,10:28:104,0,244	0/1:23,7:30:35,0,255	1/1:2,26:31:255,54,0
+chr21	33961657	chr21:33961657:M	AAAAAAAAAAAAAAAAGAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:12:36,0,107	0/1:2,3:6:35,0,19	1/1:1,6:8:94,6,0
+chr21	33965116	chr21:33965116:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2:41:0,74,255	0/1:19,12:31:121,0,244	0/0:45,0:49:0,143,255
+chr21	33965458	chr21:33965458:M	AATATAATAAATATAATAAATATA	<5.6>	.	.	Motif=AATAT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,8:8:255,24,0	1/1:0,32:32:255,96,0
+chr21	33971511	chr21:33971511:M	ACACACACACACACACACACACACACAC	<11>,<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,24,0:40:255,0,255,255,255,255	1/2:0,14,12:28:255,219,255,255,0,255	0/0:34,0,1:36:0,98,255,85,255,255
+chr21	33972215	chr21:33972215:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:22,18,30,0,18,23	1/1:0,3,0:3:51,9,0,51,9,51	1/2:0,2,7:9:201,120,96,30,0,9
+chr21	33974050	chr21:33974050:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACATATATACACACACACA	<33.5>,<39.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,2,3:5:108,80,74,34,0,43	1/1:0,3,0:3:49,9,0,58,9,90	2/2:0,0,0:2:3,3,3,1,1,0
+chr21	33976338	chr21:33976338:M	CACTCACTCACTCACTCACTCA	<3.5>,<4.5>	.	.	Motif=CACT	GT:AD:DP:PL	1/2:0,19,26:45:255,255,255,255,0,239	1/2:0,12,20:32:255,255,255,217,0,126	2/2:0,0,31:31:255,255,255,92,92,0
+chr21	33982429	chr21:33982429:M	ATTTTTATTTTCTATTTTTTTTTTTTTTTA	<4.8>	.	.	Motif=ATTTTT	GT:AD:DP:PL	0/1:10,10:20:141,0,141	0/1:10,10:22:149,0,137	0/0:19,1:21:0,41,255
+chr21	33989253	chr21:33989253:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:23,0,22	1/1:0,2:3:69,9,0	0/1:1,4:5:95,0,12
+chr21	34002127	chr21:34002127:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:11:35,0,70	0/0:13,2:20:0,17,208	0/0:11,2:16:0,10,178
+chr21	34007811	chr21:34007811:M	TGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,9:18:119,0,98	0/1:18,10:28:97,0,240	0/1:19,16:38:197,0,253
+chr21	34010553	chr21:34010553:M	AAAAAAAAATAAAAAAATAAAAATATAAAATAAAAAATAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12:30:142,0,255	0/1:6,13:19:178,0,52	0/1:9,12:21:162,0,107
+chr21	34012002	chr21:34012002:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,1,30:32:255,255,255,67,65,0	0/2:8,1,8:17:150,92,152,0,93,152	1/2:3,9,6:20:156,21,28,39,0,109
+chr21	34017396	chr21:34017396:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,20:40:255,0,255	0/1:17,23:43:255,0,202	0/0:33,2:35:0,66,255
+chr21	34026119	chr21:34026119:M	ATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCT	<19.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:6,0:6:0,18,113	0/0:8,0:8:0,24,143	0/1:9,4:13:35,0,127
+chr21	34029557	chr21:34029557:M	AAAAAAAAAAAATAAAATAAAAATAAAAATAAAAATAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:164,0,178	0/1:5,9:18:211,0,98	0/0:24,0:25:0,75,255
+chr21	34030496	chr21:34030496:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:41:226,0,255	1/1:4,28:33:255,26,0	0/0:46,3:49:0,90,255
+chr21	34044971	chr21:34044971:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6:17:68,0,134	0/0:10,0:12:0,35,194	1/1:0,12:12:215,35,0
+chr21	34045613	chr21:34045613:M	ATAATAATAATAATA	<6>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:20,19:39:252,0,255	0/0:41,0:41:0,121,255	1/1:1,43:44:255,111,0
+chr21	34047500	chr21:34047500:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,2:31:0,51,255	0/1:14,5:20:38,0,185	0/0:23,2:27:0,42,255
+chr21	34049832	chr21:34049832:M	ACACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,7,1:9:216,24,0,140,9,117	1/2:0,3,8:12:197,110,98,60,0,27	.
+chr21	34051025	chr21:34051025:M	ACACACACACACACACACACATACACACACACACACACAGACATACACACACACACA	<24.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,1,17:18:255,255,255,54,35,0	0/2:9,0,11:21:254,184,255,0,240,208	1/2:0,18,10:29:255,173,90,255,0,243
+chr21	34051448	chr21:34051448:M	TAAAAATAAAAA	<1.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:22,23:45:255,0,255	1/1:0,45:45:255,135,0
+chr21	34053014	chr21:34053014:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:19:71,0,161	1/1:0,19:20:255,58,0	0/0:16,3:19:0,3,230
+chr21	34053864	chr21:34053864:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:77,9,0	0/1:1,3:5:65,0,15	1/1:0,2:2:49,6,0
+chr21	34055336	chr21:34055336:M	CCTGGGCCTGGG	<2.2>	.	.	Motif=CCTGGG	GT:AD:DP:PL	1/1:0,24:24:255,66,0	1/1:0,33:33:255,91,0	1/1:0,32:32:255,89,0
+chr21	34055867	chr21:34055867:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,28	1/1:0,3:4:72,1,0	0/1:1,1:4:19,0,32
+chr21	34056514	chr21:34056514:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3:18:42,0,255	0/1:4,5:10:121,0,80	0/1:13,4:19:55,0,255
+chr21	34061096	chr21:34061096:M	AAAAAAAAAAAAAAAGAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,8,3:18:209,87,68,148,0,222	1/2:0,7,8:18:255,198,200,114,0,167	1/2:1,5,1:13:80,18,39,64,0,138
+chr21	34061108	chr21:34061108:M	AAAGAAAAGAAAGAAA	<3.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,16:16:255,47,0	1/1:0,19:19:255,55,0	1/1:0,12:12:197,35,0
+chr21	34070391	chr21:34070391:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,15:43:152,0,255	0/1:21,34:55:255,0,206	0/1:14,17:31:217,0,161
+chr21	34084280	chr21:34084280:M	GTGCTTGTGCTT	<2.2>	.	.	Motif=GTGCTT	GT:AD:DP:PL	0/1:26,19:45:255,0,255	0/1:28,19:47:255,0,255	0/0:43,0:43:0,129,255
+chr21	34086512	chr21:34086512:M	TGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,10:29:109,0,249	1/1:0,33:35:255,100,0	0/1:18,18:37:226,0,217
+chr21	34092126	chr21:34092126:M	ATATATATATATATA	<8.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,18:33:255,255,249,245,0,191	1/1:0,40,0:40:255,118,0,255,118,255	1/2:0,19,17:36:255,255,212,255,0,250
+chr21	34093239	chr21:34093239:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6:20:48,0,191	0/0:17,0:17:0,50,255	0/1:16,9:27:81,0,213
+chr21	34103316	chr21:34103316:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,17:34:212,0,183	0/1:20,14:36:137,0,255	0/1:8,27:37:255,0,37
+chr21	34116179	chr21:34116179:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGT	<21.5>,<22.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,6,0,4:13:255,111,100,228,120,219,168,0,117,166	0/3:3,0,0,7:12:207,217,255,217,255,255,0,80,50,56	1/2:0,10,8,0:19:255,115,82,182,0,130,255,137,183,255
+chr21	34136137	chr21:34136137:M	TTTTTCTTTTCTTTTTTCTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:21:0,43,255	0/0:34,0:34:0,100,255	0/1:10,15:25:200,0,109
+chr21	34152398	chr21:34152398:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,1:7:53,8,6,49,0,118	1/2:2,2,3:8:55,38,56,9,0,66	0/1:4,2,0:7:6,0,41,23,50,127
+chr21	34156610	chr21:34156610:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:20:255,39,0	0/1:9,9:19:102,0,111	1/1:0,34:36:255,105,0
+chr21	34156782	chr21:34156782:M	AAAAAAAATAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,8:20:158,0,255	0/1:14,14:28:255,0,255	0/1:32,17:50:255,0,255
+chr21	34156832	chr21:34156832:M	TTTTCTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:29:193,0,165	0/1:22,24:46:255,0,252	0/1:28,19:48:214,0,255
+chr21	34157173	chr21:34157173:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<18>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,12,0:22:255,0,206,218,244,255	0/1:11,17,0:28:255,0,231,255,255,255	0/2:9,1,15:27:255,250,255,0,235,210
+chr21	34164894	chr21:34164894:M	TTTTTTTTTTTTCTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:23:159,0,129	0/1:16,11:29:111,0,219	0/1:14,11:26:135,0,181
+chr21	34169333	chr21:34169333:M	TTATTTATTTATTTATTTATTTATTTAT	<6>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,35:35:255,103,0	1/1:0,35:35:255,103,0
+chr21	34169520	chr21:34169520:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:20:255,59,0	1/1:0,16:22:255,59,0	1/1:0,14:17:255,50,0
+chr21	34173737	chr21:34173737:M	AACAACAACAACAACAACAACAACAACAACAACAACAACA	<12.3>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,28:30:255,88,0	1/1:0,16:16:255,47,0	1/1:0,32:32:255,94,0
+chr21	34190143	chr21:34190143:M	CACACACACACACACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/1:16,21:38:255,0,255	0/1:30,11:41:255,0,255	1/1:0,39:41:255,123,0
+chr21	34193227	chr21:34193227:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:10,20:30:255,0,188	0/0:3,0:3:0,9,83	0/1:7,6:13:125,0,155
+chr21	34196837	chr21:34196837:M	ATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,19:35:255,0,204	0/1:16,10:26:104,0,213	0/0:40,0:40:0,118,255
+chr21	34202389	chr21:34202389:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>,<25.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,6,5,3:17:255,74,42,85,16,53,229,0,11,223	1/2:0,8,6,0:15:255,69,28,91,0,49,255,69,91,255	0/3:6,0,0,10:22:247,255,255,255,255,255,0,183,160,148
+chr21	34202433	chr21:34202433:M	GAGAGAGAGAGAGAGAGAAAGAG	<13.5>,<67.5>	.	.	Motif=GA	GT:AD:DP:PL	1/2:0,1,5:7:83,49,43,37,0,27	0/2:11,0,7:18:35,68,255,0,236,255	0/1:8,5,0:14:74,0,143,110,176,255
+chr21	34203756	chr21:34203756:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,15:36:176,0,255	0/1:13,15:28:181,0,146	0/0:29,0:29:0,85,255
+chr21	34207705	chr21:34207705:M	ACACACACACACACACACACACACACACACACACACACACACAC	<18>,<21>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,7:29:255,129,127,255,0,255	1/2:0,11,5:19:255,91,102,255,0,255	1/1:0,19,0:23:255,66,0,255,66,255
+chr21	34210825	chr21:34210825:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:1,38:40:255,97,0	1/1:2,45:48:255,101,0
+chr21	34213151	chr21:34213151:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,2,5:11:82,41,125,0,27,35	1/2:2,3,4:10:80,11,67,5,0,25	1/2:0,4,8:12:224,119,107,70,0,36
+chr21	34221642	chr21:34221642:M	ACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/0:41,0:43:0,128,255	0/1:17,14:32:255,0,255	0/0:41,0:44:0,131,255
+chr21	34224729	chr21:34224729:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:6,0,42	1/1:0,4:4:68,12,0	0/1:3,5:9:61,0,38
+chr21	34224877	chr21:34224877:M	TTTATTTATTTATTTATTTATTTATTTA	<8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:12,14:26:178,0,142	0/0:39,0:39:0,115,255
+chr21	34228482	chr21:34228482:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	<13.5>,<14.5>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:1,10,12:23:255,207,163,145,0,135	1/1:1,22,0:23:255,50,0,255,67,255	0/2:15,1,12:28:255,204,255,0,255,255
+chr21	34236881	chr21:34236881:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/1:19,18:39:210,0,230	0/0:39,1:42:0,105,255
+chr21	34239301	chr21:34239301:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,93	1/1:1,9:10:132,12,0	0/1:4,4:8:44,0,45
+chr21	34249910	chr21:34249910:M	AAAAAAAAAGAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:24,13:37:124,0,255	0/0:43,0:44:0,129,255
+chr21	34256624	chr21:34256624:M	CACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,10:24:198,0,247	0/0:37,0:42:0,122,255	0/1:14,13:32:255,0,255
+chr21	34260532	chr21:34260532:M	TATATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,11:32:109,0,255	0/0:3,0:5:0,8,51	0/1:10,9:19:106,0,124
+chr21	34271310	chr21:34271310:M	CACACACACACACACACACACACACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/0:32,0:34:0,101,255	0/1:17,10:27:199,0,255	0/0:34,0:36:0,107,255
+chr21	34282247	chr21:34282247:M	AAAAAAAAAAAAAAAGCAAAAAAACAGAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,44,255	0/1:9,8:18:88,0,107	0/0:10,1:15:0,22,191
+chr21	34301962	chr21:34301962:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:26:255,77,0	0/1:7,2:11:24,0,178	1/1:0,17:21:255,61,0
+chr21	34302299	chr21:34302299:M	TTTTTTTTTCTTTTTTTTTTTTTTCTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,17:19:255,37,0	0/1:8,12:21:146,0,86	1/1:1,23:25:255,55,0
+chr21	34317719	chr21:34317719:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,44:45:255,114,0	0/1:20,18:39:204,0,249	1/1:1,41:42:255,105,0
+chr21	34321893	chr21:34321893:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,3:17:4,0,204	0/1:9,6:15:60,0,110	0/1:9,7:16:77,0,112
+chr21	34324973	chr21:34324973:M	TATATATATATACACATATATAT	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,19:27:255,49,0	0/1:12,5:18:52,0,164	1/1:0,13:15:255,44,0
+chr21	34324995	chr21:34324995:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,3,20:30:255,255,225,78,38,0	1/2:1,8,8:22:255,70,37,66,0,63	2/2:0,5,14:22:255,185,122,64,6,0
+chr21	34333503	chr21:34333503:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:19:255,37,0	1/1:1,14:16:223,30,0	1/1:0,19:22:255,61,0
+chr21	34341186	chr21:34341186:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:12:151,14,0	0/1:5,8:15:111,0,42	0/1:4,12:16:162,0,23
+chr21	34341979	chr21:34341979:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:23:255,67,0	0/1:10,15:26:189,0,100	1/1:2,21:28:255,45,0
+chr21	34349071	chr21:34349071:M	TAAATAAATAAATAAATAAATAAATAAATAAATAA	<7.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:20,14:34:171,0,255	1/1:0,15:15:255,44,0	0/1:19,18:37:230,0,249
+chr21	34355694	chr21:34355694:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,30:31:255,73,0	1/1:0,24:25:255,73,0
+chr21	34357176	chr21:34357176:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:58,11,0	0/1:2,0:6:14,0,20	0/1:1,6:9:78,0,5
+chr21	34363026	chr21:34363026:M	AAAACAACAACAACAAACAAAAAC	<4.5>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:35,0:35:0,105,255	0/1:12,9:21:166,0,241	0/0:38,0:38:0,114,255
+chr21	34364773	chr21:34364773:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:31:255,72,0	0/1:10,12:23:143,0,116	1/1:0,19:19:255,56,0
+chr21	34368198	chr21:34368198:M	CACACACACACACACACACACACACACACACA	<17>	.	.	Motif=CA	GT:AD:DP:PL	0/0:13,1:14:0,27,137	0/0:13,0:13:0,35,145	0/1:7,3:10:7,0,52
+chr21	34368230	chr21:34368230:M	ATATATATATATATATATATATATATATATATGTATGTTATATATATGTATGTTATATATAT	<28>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,5:9:110,0,49	1/1:0,0:1:14,3,0	0/1:3,5:8:101,0,53
+chr21	34374051	chr21:34374051:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:12:80,0,53	0/1:10,3:14:10,0,137	0/1:5,8:13:99,0,47
+chr21	34393139	chr21:34393139:M	ACACACACACACACACACACACCGCACACACACACA	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,251	0/1:12,5:18:36,0,171	0/0:13,1:15:0,25,231
+chr21	34403368	chr21:34403368:M	AAAAAAAGAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:21:110,0,168	0/1:7,6:13:70,0,88	0/1:10,10:20:127,0,127
+chr21	34403832	chr21:34403832:M	TTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:11:132,0,107	0/1:5,7:12:154,0,103	0/1:8,15:23:255,0,155
+chr21	34414213	chr21:34414213:M	CACACACACGCGCACACACACACACACACACACACACACACACACACACA	<24>,<26>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,1,4:7:51,52,109,0,13,26	1/2:0,5,1:7:91,16,7,91,0,131	0/0:11,2,1:14:0,6,168,23,148,195
+chr21	34418470	chr21:34418470:M	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	<6.2>,<9.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/2:0,3,6:9:179,114,150,80,0,62	0/1:3,3,0:6:72,0,71,80,54,126	1/2:0,5,1:6:147,19,12,131,0,128
+chr21	34431453	chr21:34431453:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:28:129,0,240	0/1:11,15:26:196,0,120	0/1:8,8:16:103,0,101
+chr21	34439432	chr21:34439432:M	TGTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,7:14:89,0,88	0/1:5,5:11:59,0,58	0/1:6,8:14:105,0,67
+chr21	34444562	chr21:34444562:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,6,39	0/0:6,0:9:0,26,206	0/1:4,4:9:100,0,91
+chr21	34455183	chr21:34455183:M	AAAAAAAAAAAAAAAGAAACAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:88,0,21	0/1:3,11:17:145,0,5	0/1:2,5:10:59,0,22
+chr21	34469031	chr21:34469031:M	AAACAAACAAACAAACA	<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,9:9:252,27,0	0/1:10,8:18:172,0,228
+chr21	34477050	chr21:34477050:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,15:16:255,28,0	1/1:0,22:22:255,65,0	0/1:12,10:22:126,0,161
+chr21	34490963	chr21:34490963:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,255	0/0:14,0:14:0,41,252	0/1:12,9:21:106,0,161
+chr21	34491139	chr21:34491139:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:4:0,0,0	1/1:0,7:7:210,21,0	0/0:1,0:4:0,3,29
+chr21	34519363	chr21:34519363:M	TTTTCTTTTCTTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<53>,<54>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:12,15,41,0,18,12	1/2:0,3,6:9:161,85,76,50,0,25	2/2:0,0,5:6:76,79,88,6,15,0
+chr21	34522189	chr21:34522189:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,3:38:0,55,255	0/0:28,2:33:0,57,255	0/1:17,20:40:255,0,202
+chr21	34523785	chr21:34523785:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,37:37:255,109,0	0/1:25,19:44:221,0,255
+chr21	34527855	chr21:34527855:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:29:0,72,255	0/0:25,0:27:0,78,255	0/1:16,13:33:255,0,255
+chr21	34528956	chr21:34528956:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,2:46:0,98,255	0/0:46,2:48:0,106,255	0/1:21,23:45:255,0,255
+chr21	34532964	chr21:34532964:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,13,15:30:255,255,255,217,0,255	2/2:1,0,20:23:255,255,255,46,54,0	1/2:1,11,7:21:255,116,153,187,0,255
+chr21	34546374	chr21:34546374:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/1:30,12:43:81,0,255	0/0:38,3:41:0,67,255
+chr21	34556066	chr21:34556066:M	AAATAAATAAATAAATAAATAAATAAATAAATAATTAAA	<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:5,4:9:85,0,112	1/1:0,6:6:166,18,0	0/0:12,0:12:0,36,255
+chr21	34556109	chr21:34556109:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,58,0	1/1:1,7:9:112,9,0	1/1:1,15:17:255,32,0
+chr21	34556430	chr21:34556430:M	AATAATAATAATAATAATAATAATAATAATA	<11.3>,<12.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/2:13,0,12:25:255,227,255,0,244,255	0/0:19,0,0:20:0,58,255,59,255,255	1/2:0,10,8:20:255,159,103,169,0,140
+chr21	34563755	chr21:34563755:M	AAAAAAAAAAAAAAAAA	<13>,<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,6,2,4:16:247,71,107,82,57,76,108,0,39,75	2/3:0,0,3,0:5:69,31,50,1,18,6,25,22,0,16	1/3:0,4,0,3:7:155,49,37,67,27,48,76,0,36,56
+chr21	34563795	chr21:34563795:M	AGAGAGAGAGAGAGAGAGAGAGAGAG	<14>,<15>,<16>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,3,12,7:22:255,234,179,72,42,16,128,66,0,96	1/3:0,2,2,2:6:81,43,28,20,4,9,25,0,4,28	0/1:2,3,2,0:8:33,0,2,4,0,33,32,17,50,98
+chr21	34583179	chr21:34583179:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:62,0,88	0/0:16,2:19:0,21,248	1/1:0,18:19:255,53,0
+chr21	34601818	chr21:34601818:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,1:8:0,6,100	0/1:5,3:8:27,0,61	0/0:14,0:18:0,30,243
+chr21	34605922	chr21:34605922:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2,0:9:31,0,158,32,153,177	0/0:12,0,0:15:0,44,255,42,255,255	1/2:0,3,7:10:253,119,91,52,0,23
+chr21	34619211	chr21:34619211:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:41:0,120,255	0/0:38,1:41:0,100,255	0/1:18,20:39:255,0,214
+chr21	34625574	chr21:34625574:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:45:0,114,255	0/0:23,2:26:0,42,255	0/1:17,14:34:171,0,204
+chr21	34635885	chr21:34635885:M	TTTTTTTTTTTTTTTTTCTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,3:16:0,1,139	0/0:18,1:21:0,45,255	0/1:10,9:21:84,0,91
+chr21	34644138	chr21:34644138:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:61,40,34,6,6,0	1/2:0,1,3:5:118,58,46,17,0,2	1/2:0,4,1:5:140,17,2,67,0,53
+chr21	34664881	chr21:34664881:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:32:0,94,255	0/0:14,0:14:0,41,241	0/1:19,16:36:190,0,233
+chr21	34666297	chr21:34666297:M	TTATTTTATTTTTATTTTTTTT	<4.6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/0:44,2:47:0,92,255	0/1:11,23:34:255,0,152
+chr21	34671122	chr21:34671122:M	AAAAAAAAAAAAAAAAAAAAA	<14>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,2:8:56,72,159,0,72,56	2/2:0,0,6:8:161,173,195,21,21,0	0/1:4,10,0:17:255,0,89,255,89,255
+chr21	34675253	chr21:34675253:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1,0:12:0,17,182,35,185,208	0/1:12,4,0:16:22,0,160,68,172,255	0/2:7,1,3:11:21,35,157,0,87,102
+chr21	34678276	chr21:34678276:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:14:0,22,203	0/0:11,2:13:0,4,156	0/1:11,11:25:141,0,132
+chr21	34691553	chr21:34691553:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,232	1/1:1,35:37:255,81,0	0/1:13,22:38:255,0,146
+chr21	34693971	chr21:34693971:M	TTTTCTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,21:27:255,0,56	0/1:1,11:17:255,0,12	0/0:7,0:15:0,27,234
+chr21	34694136	chr21:34694136:M	TTTTTTTTTTTTTTTTT	<16>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,1,2:12:21,33,167,0,144,243	2/2:0,0,3:3:84,84,84,9,9,0	0/1:15,6,0:21:45,0,206,106,255,255
+chr21	34699416	chr21:34699416:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,2,9:19:128,90,241,0,68,63	1/2:2,6,12:21:255,134,164,73,0,50	0/2:4,2,3:9:48,10,102,0,34,43
+chr21	34700447	chr21:34700447:M	AAAAAAAAAAAAAAAAGAAAAGAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:20,0,97	1/1:0,3:3:84,9,0	0/0:5,0:6:0,18,157
+chr21	34707438	chr21:34707438:M	CACACACACACACACACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:12,11:23:239,0,255	1/1:0,36:36:255,108,0	0/0:29,0:32:0,93,255
+chr21	34711517	chr21:34711517:M	AAATAAACAAACAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<12>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	2/2:0,0,14:14:255,255,255,41,41,0	1/2:0,5,5:10:205,77,62,90,0,62	0/2:9,0,11:20:149,176,255,0,167,112
+chr21	34714685	chr21:34714685:M	AAAAAAACAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,0:10:0,29,167	0/0:13,0:16:0,46,255	0/1:5,6:11:76,0,57
+chr21	34716832	chr21:34716832:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:7,6:17:89,0,111	1/1:0,17:21:255,61,0	0/0:23,0:25:0,63,255
+chr21	34716863	chr21:34716863:M	CACACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,7:20:38,0,86	0/1:11,9:22:51,0,78	0/0:20,0:22:0,60,255
+chr21	34720274	chr21:34720274:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5,0:17:41,0,169,89,184,255	0/2:14,1,7:24:72,118,255,0,185,183	0/1:11,2,0:14:6,0,155,44,164,224
+chr21	34725632	chr21:34725632:M	TTTTTTTTTTGTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:18:19,0,131	1/1:1,18:20:231,40,0	0/0:24,0:24:0,68,255
+chr21	34739954	chr21:34739954:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,16:33:223,0,186	1/1:3,38:41:255,67,0	0/0:42,1:44:0,111,255
+chr21	34740525	chr21:34740525:M	ATCCATCCATCCATCCATCCATCCATCCACTCATCAATTTGCCCCATCGTCCATCCATCCATCCATCCATC	<18.8>	.	.	Motif=ATCC	GT:AD:DP:PL	0/1:2,6:8:89,0,14	0/0:3,0:3:0,9,53	0/0:10,0:10:0,29,184
+chr21	34747424	chr21:34747424:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10:22:117,0,153	0/1:13,14:30:178,0,140	0/0:20,1:23:0,49,255
+chr21	34748558	chr21:34748558:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGT	<24>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,8:16:91,0,89	0/1:12,8:20:73,0,138	0/0:19,0:21:0,61,255
+chr21	34753378	chr21:34753378:M	ACACACACACACACACACACAC	<12>,<13>	.	.	Motif=AC	GT:AD:DP:PL	0/2:5,1,8:16:114,68,85,0,41,63	0/1:12,7,1:20:27,0,67,46,108,238	0/0:24,0,0:28:0,70,255,80,255,255
+chr21	34753399	chr21:34753399:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<27.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:2,0:6:11,0,63	1/1:0,3:3:80,9,0	1/1:0,3:8:99,4,0
+chr21	34757755	chr21:34757755:M	TTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:5:128,127,127,15,15,0	1/2:0,7,2:11:255,65,41,198,0,188	2/2:0,0,5:5:163,163,162,15,15,0
+chr21	34764477	chr21:34764477:M	TCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,29:31:255,93,0	0/1:8,8:17:168,0,187	1/1:0,34:37:255,111,0
+chr21	34764606	chr21:34764606:M	AAATAAAATATAAATAAATAAATAAATAAATAAATACATTAAAAAAATAAA	<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,20:20:255,59,0	0/1:6,11:17:148,0,58	1/1:0,29:29:255,86,0
+chr21	34764702	chr21:34764702:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:6:66,0,0	0/0:2,0:3:0,9,47	0/1:2,0:5:14,0,23
+chr21	34767335	chr21:34767335:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:25:255,48,0	0/1:8,11:22:137,0,88	0/1:4,18:22:255,0,6
+chr21	34772764	chr21:34772764:M	CTTTCTTTCTTTC	<6.2>	.	.	Motif=CTTT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	0/1:24,15:39:255,0,255	1/1:0,38:39:255,117,0
+chr21	34773326	chr21:34773326:M	TGTGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,14:31:255,0,255	0/1:25,14:41:255,0,255	0/1:18,17:38:255,0,255
+chr21	34774464	chr21:34774464:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,7,15:28:255,255,255,166,0,104	0/1:6,6,0:16:127,0,139,135,147,255	1/2:0,9,11:23:255,255,255,206,0,164
+chr21	34776527	chr21:34776527:M	TTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:97,12,0	0/0:3,0:5:0,11,103	.
+chr21	34793707	chr21:34793707:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:222,0,185	0/1:13,11:26:139,0,153	0/1:25,5:30:3,0,255
+chr21	34804743	chr21:34804743:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:15:38,0,138	0/1:4,9:17:106,0,61	0/1:7,3:13:37,0,98
+chr21	34820645	chr21:34820645:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,15:28:202,0,140	0/0:30,0:31:0,91,255	0/1:13,11:26:123,0,176
+chr21	34823431	chr21:34823431:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,11:17:255,200,154,87,0,38	2/2:0,1,12:13:255,219,183,39,21,0	1/2:0,6,18:25:255,255,235,112,0,41
+chr21	34842493	chr21:34842493:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,17	0/1:2,4:6:47,0,15	1/1:0,1:3:36,8,0
+chr21	34844581	chr21:34844581:M	AATGAATGAGTGAGTGAGTGAATGAATGAATGA	<7.2>	.	.	Motif=AATG	GT:AD:DP:PL	0/1:7,9:20:110,0,74	0/1:16,21:38:242,0,156	0/0:24,0:24:0,70,255
+chr21	34847918	chr21:34847918:M	TTTTTTTTTTCTTCTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:35:193,0,252	0/1:17,17:34:199,0,200	0/0:41,0:41:0,121,255
+chr21	34850028	chr21:34850028:M	AACAACAACAACAA	<3.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:22,17:45:255,0,255	0/1:14,17:33:249,0,169	0/0:38,0:38:0,112,255
+chr21	34852170	chr21:34852170:M	AAAACAAAACAAAACAAAACAAAACAAAACAA	<5.4>,<7.4>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:7,16,0:23:243,0,68,255,116,255	1/2:0,18,13:31:255,231,255,255,0,255	0/2:13,0,18:32:248,255,255,0,211,157
+chr21	34853816	chr21:34853816:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,9:20:98,0,119	0/1:12,16:29:181,0,117	1/1:2,18:21:255,27,0
+chr21	34860519	chr21:34860519:M	GTGTGTCTGTGCGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,24:25:255,55,0	0/1:14,9:23:93,0,182	0/1:21,15:37:168,0,255
+chr21	34865275	chr21:34865275:M	TGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:5,0:6:0,18,156	0/0:3,0:5:0,9,88	1/1:0,3:4:84,9,0
+chr21	34871847	chr21:34871847:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:19:255,0,135	0/0:21,0:22:0,63,255	0/1:7,20:27:255,0,112
+chr21	34874124	chr21:34874124:M	TCTCTCTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:14,22:36:255,0,255	0/1:25,24:53:255,0,255	0/0:21,0:21:0,63,255
+chr21	34874678	chr21:34874678:M	AAAAAAAAAACAACAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,16:29:214,0,158	0/1:15,13:28:148,0,183	0/0:32,0:33:0,97,255
+chr21	34876851	chr21:34876851:M	TTTCTTTTTCTTTTTTCTTTTT	<2.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:11,21:32:255,0,214	0/1:21,20:41:255,0,255	0/0:41,0:41:0,123,255
+chr21	34878345	chr21:34878345:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10,0:20:108,0,81,162,114,255	1/2:3,12,5:20:158,36,83,139,0,255	0/0:13,2,0:17:0,4,155,44,164,222
+chr21	34878361	chr21:34878361:M	ATATATATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:30,0:32:0,95,255	0/0:23,0:26:0,76,255	0/1:11,7:22:137,0,232
+chr21	34882691	chr21:34882691:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,31:46:255,0,255	0/1:15,23:42:255,0,255	0/0:32,2:34:0,37,255
+chr21	34894881	chr21:34894881:M	ACACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,3,1:4:103,25,17,78,0,75	0/1:10,8,0:19:191,0,238,221,255,255	0/2:4,0,4:9:88,105,222,0,106,89
+chr21	34909589	chr21:34909589:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,2:13:0,4,148	0/0:7,0:8:0,21,116	0/1:3,3:6:33,0,33
+chr21	34928962	chr21:34928962:M	GGGGGGGGGGG	<13>	.	.	Motif=G	GT:AD:DP:PL	1/1:2,12:21:255,10,0	1/1:1,9:14:225,16,0	0/1:3,14:20:255,0,17
+chr21	34937321	chr21:34937321:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,3,3:9:65,7,35,0,8,67	0/1:5,3,2:10:43,0,56,9,50,127	0/1:4,6,0:11:75,0,40,78,60,177
+chr21	34964488	chr21:34964488:M	AAAAAAAAAAAAAAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:6,7:14:82,0,65	0/1:14,10:24:105,0,178
+chr21	34971505	chr21:34971505:M	CCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACCACCATC	<12>,<14>	.	.	Motif=CCAT	GT:AD:DP:PL	0/0:20,0,0:20:0,59,255,59,255,255	0/1:5,11,0:16:151,0,43,194,77,255	0/2:13,0,9:23:101,165,255,0,216,188
+chr21	34976129	chr21:34976129:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:38:255,0,155	0/0:32,2:35:0,67,255	0/1:17,20:39:255,0,192
+chr21	34978924	chr21:34978924:M	ACACACACACAGATACACACACACACACACACACACACACACACACACACACACACA	<29.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6,0:7:101,18,0,106,6,163	2/2:0,0,6:8:204,188,180,24,21,0	0/1:1,4,0:7:51,0,2,65,17,132
+chr21	34982398	chr21:34982398:M	GTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,16:17:255,51,0	1/1:0,25:29:255,83,0	1/1:0,22:22:255,66,0
+chr21	34985868	chr21:34985868:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:14,3,0	0/1:0,0:2:0,0,0	1/1:0,4:5:126,15,0
+chr21	34991545	chr21:34991545:M	GATGATGATGATGATGATGATGATGATGATGGTGATGATGA	<12.7>	.	.	Motif=GAT	GT:AD:DP:PL	1/1:1,27:30:255,66,0	1/1:0,21:21:255,62,0	1/1:0,27:29:255,85,0
+chr21	34992675	chr21:34992675:M	AAAAAAAAAAAAAAGAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:20:196,0,50	0/1:12,11:25:128,0,143	1/1:1,22:26:255,58,0
+chr21	34995436	chr21:34995436:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,89	0/0:1,0:3:0,5,27	0/1:1,3:6:48,0,3
+chr21	35001309	chr21:35001309:M	TATATATATATATATATATATATATA	<8>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,26,17:44:255,255,255,255,0,255	1/2:0,23,9:33:255,157,173,255,0,255	1/1:1,32,0:33:255,69,0,255,87,255
+chr21	35002383	chr21:35002383:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTTATTTATTTATTTA	<13.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,8:10:236,24,0	1/1:0,1:2:27,3,0	1/1:0,10:10:255,30,0
+chr21	35022896	chr21:35022896:M	AATAATAATAATAATAATAATAATAA	<12.7>,<13.7>,<14.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/3:0,7,1,4:12:255,114,89,193,59,160,197,0,116,180	2/3:0,0,3,3:6:169,136,126,54,54,37,54,46,0,37	1/2:0,13,5,0:19:255,94,38,251,0,200,255,80,250,255
+chr21	35033123	chr21:35033123:M	TCATTCATTCATTCATTCA	<5.8>	.	.	Motif=TCAT	GT:AD:DP:PL	0/1:24,15:39:174,0,255	1/1:1,26:27:255,61,0	0/1:26,24:50:255,0,255
+chr21	35037925	chr21:35037925:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:1,19:22:255,47,0	1/1:2,25:28:255,46,0
+chr21	35038573	chr21:35038573:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<12>,<13>,<18>	.	.	Motif=CT	GT:AD:DP:PL	2/3:2,2,3,3:11:136,44,81,25,56,61,70,19,0,109	1/2:0,12,2,0:17:255,54,4,127,0,77,255,54,127,255	1/3:0,6,0,8:20:255,220,206,255,220,255,191,0,70,161
+chr21	35038614	chr21:35038614:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<21>,<24>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,3,8,5:20:255,184,155,131,97,106,230,38,0,227	1/2:0,5,12,0:17:255,130,80,58,0,7,255,130,58,255	1/2:1,7,8,2:19:255,67,45,55,0,33,255,40,30,255
+chr21	35038647	chr21:35038647:M	GAGATAGAGAGAGAGAGAGAGAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/0:17,4:22:0,8,185	0/0:27,0:27:0,76,255	0/1:14,14:30:112,0,112
+chr21	35040772	chr21:35040772:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:28,6,0	.	1/1:0,3:4:59,11,0
+chr21	35047515	chr21:35047515:M	ACACACACACACACACACACACACACACACACACACACACACACACAC	<18>,<19>,<20>,<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	3/4:0,2,4,8,8,2:25:255,255,255,203,201,167,99,64,47,48,132,49,8,0,76,255,167,82,39,104,242	1/4:0,6,0,2,2,1:12:255,78,55,122,48,93,144,8,78,117,175,0,68,114,156,210,26,83,122,163,196	2/5:0,1,4,3,0,5:14:255,154,158,101,105,99,115,81,66,91,152,75,45,75,120,150,45,0,25,97,126
+chr21	35047562	chr21:35047562:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<16.5>,<20.5>,<25.5>	.	.	Motif=CT	GT:AD:DP:PL	0/2:6,0,4,0:12:28,57,176,0,78,93,64,201,126,255	2/3:2,0,5,4:12:128,151,244,70,99,81,46,149,0,167	0/1:2,6,0,0:11:84,0,5,115,32,236,116,38,248,255
+chr21	35049396	chr21:35049396:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,97,255	0/1:17,14:33:155,0,227	0/0:38,1:40:0,99,255
+chr21	35049986	chr21:35049986:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,10,0,6:17:255,159,129,255,106,255,255,0,255,255	1/1:0,24,0,0:24:255,72,0,255,72,255,255,72,255,255	2/3:3,0,5,5:13:140,165,255,34,87,50,21,115,0,86
+chr21	35060265	chr21:35060265:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,22:41:255,0,243	0/1:14,19:34:241,0,162	0/1:20,21:41:255,0,252
+chr21	35064790	chr21:35064790:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,19:43:233,0,255	0/1:16,22:40:255,0,169	0/1:18,23:41:255,0,212
+chr21	35072210	chr21:35072210:M	CTCTCTCTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:11,16:27:203,0,115	0/0:27,1:28:0,64,255
+chr21	35076743	chr21:35076743:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,15,0:22:255,0,96,255,140,255	0/2:6,0,11:20:255,255,255,0,168,129	0/1:7,16,0:26:255,0,131,255,184,255
+chr21	35079563	chr21:35079563:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:4:0,0,22	0/1:2,4:9:39,0,7	0/1:3,2:6:15,0,17
+chr21	35079739	chr21:35079739:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:83,0,110	0/1:9,8:17:90,0,108	0/1:19,12:34:127,0,255
+chr21	35083042	chr21:35083042:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:16,0,38	1/1:0,3:6:52,10,0	0/1:3,3:7:31,0,43
+chr21	35084547	chr21:35084547:M	TATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,11:40:76,0,249	1/1:0,13:16:212,45,0	0/1:16,17:37:157,0,143
+chr21	35086386	chr21:35086386:M	CACACATACACACACACACACACACACACACACACACACA	<18>,<23>	.	.	Motif=CA	GT:AD:DP:PL	0/2:14,0,6:22:106,148,255,0,255,255	1/2:0,9,7:17:255,180,150,241,0,225	0/2:10,0,8:19:188,218,255,0,255,238
+chr21	35093006	chr21:35093006:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:12,17:31:255,0,255	1/1:0,13:18:255,39,0	0/1:13,19:34:255,0,255
+chr21	35099863	chr21:35099863:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,31:52:255,0,246	0/0:36,1:39:0,93,255	0/1:21,25:46:255,0,253
+chr21	35102904	chr21:35102904:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,4:6:67,81,129,0,16,1	1/2:0,8,0:13:140,25,3,138,0,216	0/1:4,1,0:5:3,0,56,18,59,86
+chr21	35105835	chr21:35105835:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,2:12:255,38,25,222,0,210	1/1:0,6,0:8:205,24,0,182,18,173	0/2:5,0,7:13:96,121,255,0,84,49
+chr21	35106755	chr21:35106755:M	CCAGCCCAGCCCAGCCCAGCCCAGCCCAGCACAGCACAGCACAGCCCTGCCCAG	<11.8>	.	.	Motif=CCAGC	GT:AD:DP:PL	0/1:9,7:16:86,0,124	0/1:12,10:22:115,0,151	0/0:19,0:19:0,56,255
+chr21	35114655	chr21:35114655:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:33:0,90,255	0/1:17,10:34:42,0,122	0/0:30,1:31:0,73,255
+chr21	35116447	chr21:35116447:M	GTGTGTGTGTGTGT	<6>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,33:52:255,0,208	0/0:8,0:8:0,24,143	1/1:0,51:51:255,150,0
+chr21	35116460	chr21:35116460:M	TATATATATATAT	<5.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:51,0:51:0,145,255	0/1:8,13:22:117,0,57	0/0:54,2:56:0,131,255
+chr21	35123994	chr21:35123994:M	AAAAAAAAAAAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:34:255,0,157	0/0:31,1:36:0,86,255	1/1:3,31:39:255,34,0
+chr21	35126441	chr21:35126441:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,20:45:253,0,255	0/1:17,17:34:209,0,209	1/1:0,39:39:255,115,0
+chr21	35127742	chr21:35127742:M	ATATATATATATATAT	<9>,<10>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,23,0:39:255,0,195,255,255,255	0/0:38,0,0:38:0,112,255,114,255,255	1/2:0,19,11:30:255,208,121,255,0,255
+chr21	35132879	chr21:35132879:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,2:7:37,0,65	0/0:1,0:1:0,3,25	1/1:0,8:12:234,29,0
+chr21	35134159	chr21:35134159:M	GTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<28>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:19:0,57,255	0/1:5,2:8:32,0,124	0/1:2,3:5:65,0,39
+chr21	35137864	chr21:35137864:M	TTTATTTATTTATTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:11,12:23:255,0,228	0/0:37,0:37:0,111,255
+chr21	35138383	chr21:35138383:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,6,0:19:255,93,54,235,0,182,255,109,236,255	2/3:0,0,19,10:30:255,255,255,255,255,224,255,255,0,255	1/1:0,39,0,0:41:255,123,0,255,120,255,255,123,255,255
+chr21	35139452	chr21:35139452:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:21:0,54,255	0/1:18,25:48:255,0,255	0/0:38,0:43:0,122,255
+chr21	35140180	chr21:35140180:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,3:8:28,52,212,0,86,63	0/1:2,10,1:14:247,0,32,239,16,255	0/2:5,0,2:8:11,34,191,0,92,72
+chr21	35141273	chr21:35141273:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,2:21:0,24,255	0/1:9,9:19:110,0,102	0/0:15,1:17:0,32,255
+chr21	35153190	chr21:35153190:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:7:14,0,66	0/0:9,1:12:0,18,151	0/1:13,5:18:33,0,170
+chr21	35154687	chr21:35154687:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:17,7:24:118,0,255	0/1:13,12:28:255,0,255
+chr21	35156060	chr21:35156060:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,70,255	0/1:5,4:9:25,0,38	0/0:15,0:15:0,42,190
+chr21	35158843	chr21:35158843:M	CAAAAAACAAACAAACAAACAAACAAACAAA	<5.8>	.	.	Motif=CAAA	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:23,18:42:255,0,255	0/0:27,0:30:0,81,255
+chr21	35166279	chr21:35166279:M	GAAGGAGGGAGGGAGGGAAGGAAGGGGGAAGGGAAGAAAGAAAGAAGGAACGAAGGAAGGAAGGAA	<8.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:11,4:15:54,0,238	0/0:18,0:19:0,44,255	0/1:12,3:19:58,0,255
+chr21	35188926	chr21:35188926:M	AAAAAAAGAAAAAAAAAGAGAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:25,0:25:0,74,255	0/1:15,11:26:130,0,204
+chr21	35188980	chr21:35188980:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,2:43:0,89,255	0/0:30,0:30:0,88,255	0/1:19,13:32:149,0,255
+chr21	35189009	chr21:35189009:M	ACACACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,16:42:91,0,169	0/1:10,15:30:107,0,73	0/1:13,14:36:80,0,112
+chr21	35199034	chr21:35199034:M	ACACACACACACACACACACACACACACACACACA	<13.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:20,0,0:20:0,60,255,60,255,255	0/2:16,0,13:29:255,255,255,0,255,255	0/1:11,10,0:22:245,0,255,255,255,255
+chr21	35205674	chr21:35205674:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<18.5>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/2:6,0,6:15:128,157,255,0,184,164	0/0:10,0,0:10:0,30,255,30,255,255	1/2:0,8,4:12:255,99,77,217,0,205
+chr21	35211072	chr21:35211072:M	ACAAACAAACAAACAAACAAACAAACAAACAAAAAAC	<10.2>	.	.	Motif=ACAA	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/0:28,0:29:0,85,255	0/1:22,15:37:173,0,255
+chr21	35216611	chr21:35216611:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:43,1:45:0,114,255	0/1:22,18:40:210,0,255
+chr21	35224602	chr21:35224602:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:13,1:14:0,24,203	0/1:11,14:25:171,0,119
+chr21	35230373	chr21:35230373:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/0:15,0:18:0,45,255	0/1:12,8:24:142,0,255
+chr21	35232459	chr21:35232459:M	TGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:14,9:23:90,0,178	0/1:17,14:31:162,0,217
+chr21	35236635	chr21:35236635:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,6:18:114,0,141	0/1:15,2:21:3,0,255	0/1:4,7:16:167,0,54
+chr21	35240430	chr21:35240430:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,5,7:21:67,27,177,0,27,135	0/2:16,0,10:26:93,165,255,0,227,197	0/1:14,12,0:27:139,0,165,211,204,255
+chr21	35247362	chr21:35247362:M	TAATAATAATAATAATAATAATAATAATAATAATAA	<11>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/0:11,0:11:0,32,197	0/1:13,12:25:149,0,167
+chr21	35254535	chr21:35254535:M	GTGTGTGTGTGTGTGTGCGTGTGTGTGCTTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/0:22,0:22:0,65,255	0/1:12,13:26:165,0,153
+chr21	35264890	chr21:35264890:M	TTTTTGTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:15:0,41,251	0/0:12,1:13:0,21,187	0/1:9,9:19:101,0,110
+chr21	35265062	chr21:35265062:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:29:0,82,255	0/0:15,0:18:0,45,255	0/1:14,13:28:255,0,255
+chr21	35266369	chr21:35266369:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:17:255,32,0	1/1:1,22:23:255,50,0	0/1:9,8:17:93,0,111
+chr21	35271394	chr21:35271394:M	AAAAAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,34,0:55:255,0,228,255,255,255	0/1:20,22,0:44:255,0,222,255,255,255	0/2:19,0,12:34:255,255,255,0,255,255
+chr21	35279809	chr21:35279809:M	AACAACAACAACAACAACAACAACAACAACAACAA	<12.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:21,0:21:0,62,255	0/1:21,11:32:112,0,255
+chr21	35282442	chr21:35282442:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,30,0:33:255,96,0,255,96,255	1/1:0,25,0:25:255,75,0,255,75,255	1/2:0,14,6:21:255,166,126,255,0,255
+chr21	35287880	chr21:35287880:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:1,24:26:255,59,0	1/1:1,26:29:255,65,0
+chr21	35297316	chr21:35297316:M	CACACACACACACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,12:12:255,36,0	0/1:1,4:7:97,0,26	1/1:0,16:17:255,51,0
+chr21	35301722	chr21:35301722:M	AAAAAAAAAAAAAAAAAAGAAAA	<22>,<31>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,8,2:16:122,29,22,96,0,229	0/1:8,3,0:15:24,0,66,49,93,255	1/2:0,8,5:13:200,120,97,102,0,175
+chr21	35305131	chr21:35305131:M	TGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG	<14>,<15>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,20,23,0:43:255,255,255,255,0,255,255,255,255,255	1/3:1,17,0,14:32:255,234,255,255,255,255,255,0,255,255	2/2:0,1,32,0:33:255,255,255,97,79,0,255,255,99,255
+chr21	35307408	chr21:35307408:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:191,33,0	1/1:0,4:4:66,12,0	1/1:0,15:15:254,44,0
+chr21	35314220	chr21:35314220:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,7:9:96,0,9	0/1:5,3:8:27,0,61	0/1:5,8:14:106,0,46
+chr21	35348646	chr21:35348646:M	ATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCT	<16>	.	.	Motif=ATTCT	GT:AD:DP:PL	.	1/1:0,4:4:98,12,0	.
+chr21	35360149	chr21:35360149:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCTCTCTTCTCT	<29>,<32>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,11,7:18:255,184,151,255,0,255	2/2:0,0,14:15:255,255,255,45,45,0	1/1:0,23,0:23:255,69,0,255,69,255
+chr21	35362489	chr21:35362489:M	TGTTTTGTTTTTGTTTTTTTTTTTTG	<5.4>	.	.	Motif=TGTTT	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:0,27:27:255,80,0	1/1:4,28:33:255,22,0
+chr21	35371185	chr21:35371185:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,17:34:255,255,231,222,0,194	0/2:27,0,19:47:255,255,255,0,255,255	1/1:2,31,2:35:255,66,0,255,66,255
+chr21	35376223	chr21:35376223:M	TTTTTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23,0:25:255,74,0,255,74,255	0/1:6,12,0:22:255,0,113,255,110,255	1/2:1,13,8:23:255,120,180,255,0,255
+chr21	35382541	chr21:35382541:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,13:32:144,0,254	0/1:15,8:25:66,0,206	0/0:28,3:31:0,38,255
+chr21	35385951	chr21:35385951:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:39:220,0,248	0/1:23,14:38:140,0,255	0/0:37,0:37:0,109,255
+chr21	35393207	chr21:35393207:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,6:21:24,0,110	1/1:1,11:15:110,10,0	0/0:14,0:17:0,40,184
+chr21	35395417	chr21:35395417:M	TATATATACATATATATATGTATATATATATATATATATATGTATATATATATATAT	<31.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,6:10:116,47,38,70,0,65	.	.
+chr21	35395473	chr21:35395473:M	TTTTTTTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,6:10:234,137,120,67,0,43	0/2:0,0,2:3:51,46,55,0,14,8	1/2:0,2,1:3:79,22,15,46,0,39
+chr21	35395628	chr21:35395628:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,6:19:16,0,255	0/0:10,0:10:0,30,255	0/0:17,0:17:0,51,255
+chr21	35401192	chr21:35401192:M	TTCTTTTTCATTTTCTTTTTTTTTTTTTT	<4.7>,<5>	.	.	Motif=TTCTTT	GT:AD:DP:PL	1/2:0,4,9:13:227,175,201,79,0,71	0/2:13,1,7:23:82,109,255,0,202,213	0/1:18,15,0:34:216,0,255,255,255,255
+chr21	35403024	chr21:35403024:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<20.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,2,9,0:11:255,154,123,35,0,2,255,155,35,255	1/1:0,11,0,0:13:255,33,0,212,32,181,255,33,212,255	2/3:0,0,6,6:13:255,255,255,182,181,164,165,101,0,150
+chr21	35409715	chr21:35409715:M	CACACACACACACACACACA	<11>,<12>	.	.	Motif=CA	GT:AD:DP:PL	1/2:1,13,18:32:255,255,252,194,0,166	1/1:0,30,0:30:255,88,0,255,88,255	1/2:1,22,21:44:255,255,255,255,0,255
+chr21	35413203	chr21:35413203:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,9,0:12:169,120,140,18,0,1,197,162,34,255	2/3:0,0,6,3:9:129,137,172,51,83,63,102,102,0,152	0/1:8,6,2,0:16:137,0,197,75,110,171,169,146,194,255
+chr21	35414094	chr21:35414094:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,9:13:140,3,0	0/1:3,8:11:100,0,17	0/1:8,8:18:83,0,101
+chr21	35426247	chr21:35426247:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,26:28:255,46,0	1/1:3,28:31:255,38,0	1/1:1,32:34:255,72,0
+chr21	35429428	chr21:35429428:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,5:9:136,58,75,35,0,27	1/2:2,2,4:9:90,24,66,16,0,24	1/1:0,4,1:7:149,18,0,92,3,77
+chr21	35430398	chr21:35430398:M	TTCCTTCCTTTCTCCTTCCTTCCTTCCTTCC	<6.8>	.	.	Motif=TTCC	GT:AD:DP:PL	0/0:45,0:45:0,133,255	0/1:13,5:18:38,0,181	0/0:37,0:37:0,109,255
+chr21	35435661	chr21:35435661:M	TTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,12,0:12:255,228,195,36,35,0,228,195,35,195	0/1:12,5,2,0:20:44,0,142,34,165,255,79,192,255,255	2/3:1,0,3,6:10:226,186,183,71,86,69,23,30,0,23
+chr21	35437242	chr21:35437242:M	TTTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,3:12:255,50,16,152,0,120	0/1:7,5,0:14:108,0,164,88,177,249	0/1:4,4,0:10:79,0,98,66,108,163
+chr21	35438215	chr21:35438215:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,115,0	0/1:19,22:42:255,0,225	0/1:23,17:41:193,0,255
+chr21	35440714	chr21:35440714:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,153	0/0:6,0:6:0,18,102	0/1:6,4:10:41,0,76
+chr21	35443412	chr21:35443412:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:45:255,135,0	0/1:2,16:26:255,0,43	0/1:2,18:26:255,0,19
+chr21	35446085	chr21:35446085:M	ATATATATATATATATATATATATATATAT	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17,0:22:255,58,0,255,60,255	0/1:3,3,0:6:24,0,24,35,10,54	1/2:0,6,11:20:83,35,169,75,0,86
+chr21	35446114	chr21:35446114:M	TTTTTTTTTTTTTTTT	<11>,<15>,<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:1,0,13,9,0:24:242,255,255,116,229,175,176,255,0,255,255,255,231,255,255	1/3:0,4,2,3,0:9:118,20,74,103,24,125,89,0,62,99,132,85,136,112,197	2/4:0,0,6,0,4:12:179,183,255,108,96,89,196,250,108,254,88,157,0,155,158
+chr21	35463310	chr21:35463310:M	ACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:21,13:36:211,0,255	0/1:25,18:44:255,0,255	0/1:4,25:33:255,0,10
+chr21	35467967	chr21:35467967:M	CTCCTTCTCCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTC	<12.3>	.	.	Motif=CTC	GT:AD:DP:PL	0/1:7,10:17:137,0,81	0/1:11,13:24:159,0,124	0/0:32,0:32:0,94,255
+chr21	35480819	chr21:35480819:M	ATATATTATATATATATATA	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,15:32:195,0,231	0/1:20,11:32:106,0,255	1/1:2,29:31:255,54,0
+chr21	35505020	chr21:35505020:M	TTTTTTTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,5:22:27,0,217	0/1:10,5:15:42,0,128	0/0:27,1:32:0,74,255
+chr21	35507159	chr21:35507159:M	CACACACACACACACACACACACACACACACACACACACACACACACAC	<18.5>,<19.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,1,23:24:255,255,255,72,53,0	1/2:0,13,5:21:255,95,36,237,0,183	1/2:0,13,13:26:255,226,151,225,0,151
+chr21	35512066	chr21:35512066:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:26:255,76,0	1/1:1,25:26:255,59,0	1/1:0,19:20:255,58,0
+chr21	35512864	chr21:35512864:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:192,21,0	1/1:0,4:6:119,13,0	1/1:0,2:3:60,6,0
+chr21	35517123	chr21:35517123:M	AAAAAAAAAAGAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:21,18:40:205,0,255	0/0:44,0:44:0,130,255
+chr21	35519353	chr21:35519353:M	CACACACACACACACACACACACACACACACACA	<20>,<22>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,15:19:255,255,255,56,48,0	2/2:0,0,20:24:255,255,255,71,63,0	1/2:0,10,12:24:255,255,255,255,0,223
+chr21	35522517	chr21:35522517:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,19:51:255,0,255	0/1:15,16:34:255,0,255	0/0:39,0:43:0,120,255
+chr21	35526670	chr21:35526670:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,6:9:238,102,76,51,0,25	0/1:4,6,0:10:138,0,82,97,102,186	0/2:8,0,7:15:160,116,255,0,206,192
+chr21	35526746	chr21:35526746:M	ATATATATATATAATATATAATATATTATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,10:10:119,27,0	.	1/1:0,1:1:12,3,0
+chr21	35526825	chr21:35526825:M	ACACACACACACACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,2:17:4,0,255	0/1:5,3:9:52,0,115	0/0:14,0:14:0,42,255
+chr21	35526925	chr21:35526925:M	ATATATAGATATAGATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,10:27:31,0,255	0/0:8,0:8:0,24,207	0/0:17,1:19:0,45,255
+chr21	35526949	chr21:35526949:M	ACACACACACACACACACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:14,0:20:0,17,255	1/1:0,7:13:171,25,0	0/0:20,0:20:0,60,255
+chr21	35535564	chr21:35535564:M	AAAAAGAAAGAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:34:0,92,255	0/0:21,1:22:0,47,255	0/1:21,8:30:57,0,255
+chr21	35536843	chr21:35536843:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,119	0/1:7,3:11:17,0,94	0/0:5,1:8:0,4,80
+chr21	35553026	chr21:35553026:M	AAAAAGAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,20:49:255,0,255	0/1:13,17:32:255,0,255	1/1:0,58:61:255,182,0
+chr21	35558605	chr21:35558605:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,9,53	0/0:5,0:7:0,18,95	1/1:1,6:7:85,3,0
+chr21	35578256	chr21:35578256:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,3:43:0,73,255	0/0:33,3:38:0,60,255	0/1:19,27:47:255,0,193
+chr21	35589667	chr21:35589667:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,11:13:161,2,0	1/1:1,15:19:255,37,0	0/1:4,9:14:117,0,39
+chr21	35599704	chr21:35599704:M	GAGGAGGAGGAGGAGGAG	<7>	.	.	Motif=GAG	GT:AD:DP:PL	0/1:18,21:40:255,0,239	0/1:19,21:40:255,0,228	0/0:38,0:38:0,112,255
+chr21	35605494	chr21:35605494:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,22:35:255,0,119	0/1:22,17:41:187,0,255	1/1:0,41:41:255,121,0
+chr21	35610052	chr21:35610052:M	TATATATATATATATATATATATA	<11>,<13>	.	.	Motif=TA	GT:AD:DP:PL	0/2:13,1,9:23:99,146,255,0,184,181	1/2:0,15,3:20:255,59,36,255,0,255	0/1:8,17,0:25:233,0,71,255,122,255
+chr21	35622140	chr21:35622140:M	ATATATATATATATATATATATA	<9.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,8,6:19:209,93,146,134,0,204	1/1:0,7,0:7:140,21,0,156,21,196	2/2:1,0,5:8:97,116,174,1,21,0
+chr21	35622162	chr21:35622162:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<17>,<25>	.	.	Motif=AG	GT:AD:DP:PL	0/2:1,0,5:11:82,100,171,0,23,2	1/1:0,3,0:5:88,9,0,88,9,88	0/2:2,0,5:7:79,97,186,0,39,19
+chr21	35622263	chr21:35622263:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,14:24:189,0,104	0/1:9,8:19:95,0,112	0/0:20,0:21:0,61,255
+chr21	35629473	chr21:35629473:M	AAAAAAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,16,11:31:255,213,129,255,0,218	1/2:0,15,9:25:255,152,80,255,0,194	2/2:0,3,25:29:255,255,255,86,32,0
+chr21	35630479	chr21:35630479:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGCGTGTGTGTGT	<25>,<26>,<29>	.	.	Motif=GT	GT:AD:DP:PL	1/3:2,7,0,12:22:255,166,255,255,255,255,158,0,125,151	1/3:1,8,0,2:12:230,16,36,152,61,174,207,0,136,214	1/2:0,8,10,0:21:255,163,104,161,0,106,255,164,161,255
+chr21	35630813	chr21:35630813:M	ACACACACATACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,32:35:255,96,0	1/1:1,31:37:255,72,0	1/1:0,33:35:255,99,0
+chr21	35642006	chr21:35642006:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:21:191,0,242	0/1:15,12:30:237,0,255	0/1:14,13:30:255,0,255
+chr21	35647614	chr21:35647614:M	TTTTTCTTTTTTTTTCCTGTTTTCTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:15:255,42,0	1/1:0,11:13:255,38,0	1/1:0,14:16:255,47,0
+chr21	35650174	chr21:35650174:M	AAATAAATAAATAAATAAATAAATA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,26:26:255,77,0	1/1:0,43:43:255,127,0
+chr21	35654188	chr21:35654188:M	CACACACACACACACACACACACACACACACACACACACACA	<19>,<20>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,17,0:19:255,56,0,255,55,255	1/1:0,16,0:18:255,53,0,255,52,255	1/2:1,9,7:18:255,84,80,143,0,113
+chr21	35655703	chr21:35655703:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:18:255,52,0	1/1:0,21:21:255,62,0	1/1:2,27:30:255,52,0
+chr21	35660079	chr21:35660079:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:10:79,0,104	0/1:2,2:4:41,0,41	0/1:2,4:8:98,0,32
+chr21	35671189	chr21:35671189:M	TTTTTTTTTTTTTTTTTTTTTTT	<12>,<27>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,8:15:223,235,255,0,90,57	0/2:1,0,5:10:153,160,198,0,38,14	1/1:2,17,0:19:255,3,0,255,51,255
+chr21	35674619	chr21:35674619:M	TTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTTGTTGTT	<11.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:18,12:32:173,0,255	0/1:16,20:37:255,0,236	0/0:32,3:36:0,39,255
+chr21	35675592	chr21:35675592:M	CCCCCCCCCCCCCC	<13>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,3:4:63,12,0	0/0:1,0:1:0,3,16	0/0:1,0:1:0,3,17
+chr21	35680545	chr21:35680545:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/0:45,0:46:0,135,255	0/1:19,22:43:255,0,229
+chr21	35699740	chr21:35699740:M	ACACACACACACACACACACACACACACACACACACAC	<15>,<17>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,15,11:26:255,255,236,255,0,255	1/2:0,16,10:29:255,254,210,255,0,255	2/2:0,0,24:26:255,255,255,78,72,0
+chr21	35704557	chr21:35704557:M	AGAGAGAGAGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:20,11:33:179,0,255	0/1:12,12:25:222,0,233	0/0:37,0:37:0,111,255
+chr21	35704577	chr21:35704577:M	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<7.5>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:14,8:22:48,0,132	1/1:1,17:18:215,37,0	0/0:27,0:27:0,76,255
+chr21	35704663	chr21:35704663:M	AGAGAAAGAAGAAAGAAAAAGAAAGGAATGAAAGAAAGAGAAAGGGAACGAAAGAAAGGAAAAAGAGATAGAAAAGAGAGACAGAGACAGAGA	<7.3>	.	.	Motif=AGAGAA	GT:AD:DP:PL	1/1:0,4:4:135,12,0	1/1:0,2:2:65,6,0	1/1:0,1:1:35,3,0
+chr21	35704814	chr21:35704814:M	GAAGGAAGGAAGAAAGGAAGGAAGGAAGGAAGAAAGG	<10.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:14,3:17:8,0,215	0/1:11,7:18:74,0,143	0/0:26,0:26:0,77,255
+chr21	35704888	chr21:35704888:M	GAAAGAAAGAGAAAAGAGAAGGAAAGAGAGAGAGACAGACAGAAAAGAAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAAGGAAGAAAG	<20.2>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:1,1:2:12,0,13	0/0:2,0:2:0,6,37	1/1:0,4:4:72,12,0
+chr21	35708251	chr21:35708251:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,14,0:30:255,0,255,237,255,255	0/1:15,15,1:37:255,0,255,255,255,255	0/2:9,0,15:25:255,255,255,0,235,184
+chr21	35711660	chr21:35711660:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,20:25:255,0,18	0/1:7,14:21:181,0,59	0/1:9,6:19:79,0,115
+chr21	35714726	chr21:35714726:M	TGAGGTGAGGTGAGGTGAGGGAGG	<6.8>	.	.	Motif=TGAGG	GT:AD:DP:PL	0/1:17,13:30:255,0,255	0/1:22,12:35:228,0,255	0/1:9,16:25:255,0,175
+chr21	35719552	chr21:35719552:M	TTTTTTGTTTTTGTTTTTGTTTTTGTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:37:255,0,255	0/1:10,20:30:255,0,185	0/0:38,0:38:0,114,255
+chr21	35730163	chr21:35730163:M	TTTTTTTTTGTTTTGGTTTGGTTTGGTTTTTGGTTTTTGATTTTTGTTTTTTTTTTTTGTTTTTTTT	<15>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:5,4:10:87,0,95	0/1:3,6:9:128,0,47	0/1:4,10:15:213,0,67
+chr21	35739972	chr21:35739972:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:61,0,87	0/1:5,13:18:167,0,32	0/1:9,5:16:41,0,128
+chr21	35744789	chr21:35744789:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,8:17:174,0,146	1/1:0,8:9:229,27,0	0/0:14,0:16:0,47,255
+chr21	35768210	chr21:35768210:M	GAGAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGA	<25>	.	.	Motif=GA	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:8,8:16:166,0,169	0/0:22,0:22:0,66,255
+chr21	35782884	chr21:35782884:M	AAATAAATAAATAAAATAAACAATAAATAACAAATAAATAAATAAAATAAACAAATAAA	<16.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,15:15:255,45,0	1/1:0,5:5:122,15,0	1/1:0,9:9:223,27,0
+chr21	35788663	chr21:35788663:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,99,0	1/1:0,32:32:255,96,0	1/1:0,29:29:255,87,0
+chr21	35793298	chr21:35793298:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:39,0,5	0/1:1,4:5:50,0,2	0/1:1,2:3:24,0,8
+chr21	35816065	chr21:35816065:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30:31:255,91,0	1/1:1,34:36:255,88,0	1/1:0,26:33:255,95,0
+chr21	35832723	chr21:35832723:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,5:33:0,25,255	0/1:25,10:35:35,0,234	0/0:30,7:37:0,10,255
+chr21	35840723	chr21:35840723:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:25:255,20,0	1/1:1,20:21:255,45,0	0/1:5,15:21:206,0,26
+chr21	35840875	chr21:35840875:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7,0:8:107,6,0,110,23,135	0/1:2,6,0:8:78,0,11,84,34,135	1/2:2,6,5:14:159,43,49,46,0,89
+chr21	35841486	chr21:35841486:M	TTTTTTTTGTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,14,6:22:255,97,54,193,0,196	1/1:1,23,0:24:255,53,0,255,70,255	1/2:2,12,14:29:255,216,173,142,0,149
+chr21	35842576	chr21:35842576:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,16:19:255,56,0	1/1:0,12:12:255,36,0	1/1:0,21:25:255,74,0
+chr21	35843636	chr21:35843636:M	AGATCAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	<12.2>,<13.2>,<14.2>	.	.	Motif=AGAT	GT:AD:DP:PL	0/1:10,15,0,0:25:220,0,121,250,192,255,255,193,255,255	1/3:0,9,0,14:23:255,255,255,255,253,255,164,0,163,232	0/2:12,0,14,0:26:255,255,255,0,223,255,255,255,255,255
+chr21	35850352	chr21:35850352:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,40,0	1/1:2,33:36:255,60,0	1/1:4,35:40:255,35,0
+chr21	35851419	chr21:35851419:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,14:19:255,250,199,91,0,36	2/2:0,1,16:19:255,255,255,51,27,0	2/2:0,1,19:20:255,255,255,60,41,0
+chr21	35874526	chr21:35874526:M	TTTTGTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:15:221,27,0	0/1:2,6:10:88,0,4	1/1:2,16:22:237,7,0
+chr21	35880490	chr21:35880490:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:93,17,0	1/1:0,6:7:89,8,0	0/1:2,8:10:111,0,6
+chr21	35894902	chr21:35894902:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:21:151,0,98	0/0:24,4:29:0,17,255	0/1:13,8:24:99,0,156
+chr21	35926944	chr21:35926944:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:16:173,0,18	1/1:4,23:29:255,12,0	1/1:4,23:29:255,13,0
+chr21	35942571	chr21:35942571:M	CACACACACACACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:20,13:33:255,0,255	0/1:19,15:34:255,0,255
+chr21	35946176	chr21:35946176:M	AGAGAGAGAGAGAGAAAGAAAGAGGGAGAGAGAGAGGGAGAGAGAAGGGGGGGACAGAGAGAGAGAGA	<32>	.	.	Motif=AG	GT:AD:DP:PL	0/0:13,0:14:0,42,255	0/1:3,7:10:166,0,48	0/1:7,7:15:174,0,145
+chr21	35957269	chr21:35957269:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:7,15:25:192,0,64	0/1:11,4:19:58,0,141
+chr21	35960221	chr21:35960221:M	TCTCTCTCTCTCTCTCTCTCTCTCT	<11.5>,<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:18,9,0:27:44,0,163,119,190,255	0/2:4,3,7:14:52,51,143,0,4,47	0/2:12,0,9:21:59,117,255,0,126,99
+chr21	35960245	chr21:35960245:M	TATATATATATATATACATATACATATATATATAT	<19.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,16:20:255,28,0	1/1:0,4:4:88,12,0	1/1:0,9:10:200,27,0
+chr21	35960440	chr21:35960440:M	TGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGG	<9.8>,<12.8>	.	.	Motif=TGGA	GT:AD:DP:PL	2/2:0,0,26:26:255,255,255,77,78,0	1/2:0,7,5:12:255,89,109,185,0,170	1/2:0,16,10:26:255,185,219,255,0,255
+chr21	35965382	chr21:35965382:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,45,255	0/1:9,16:26:198,0,73	0/1:11,11:24:126,0,125
+chr21	35966749	chr21:35966749:M	TTTTTTGTTTTGTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:23:0,63,255	0/1:11,5:16:81,0,248	0/1:7,8:17:177,0,141
+chr21	35967625	chr21:35967625:M	TTTTTTGTTGTTTGTTTTTGTTTGTTTTTTTTTTGTATGTTTGTTTTTTTTTT	<52>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,46,255	0/1:7,13:20:174,0,65	0/1:14,10:24:115,0,182
+chr21	35968833	chr21:35968833:M	GAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAG	<17.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:14,14:29:158,0,158	0/1:15,10:25:104,0,192
+chr21	35970172	chr21:35970172:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:24:0,51,255	0/1:13,5:18:34,0,174	0/1:9,10:21:122,0,114
+chr21	35975950	chr21:35975950:M	GAATGAGATAGAATGAAAATAATGAATGAATGAATGAATGAATGA	<10.2>	.	.	Motif=GAAT	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/1:24,12:36:114,0,255	0/1:10,9:19:115,0,131
+chr21	35982990	chr21:35982990:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6,0:17:54,0,132,103,178,255	0/1:9,4,0:14:36,0,107,75,147,255	0/2:4,0,4:8:88,99,155,0,67,95
+chr21	35985925	chr21:35985925:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:66,0,5	0/1:1,1:2:14,0,14	1/1:0,0:3:16,3,0
+chr21	35985941	chr21:35985941:M	ATATATATATATATATATATATATATATGTATAT	<15>,<17.5>,<19>	.	.	Motif=AT	GT:AD:DP:PL	2/3:0,0,4,7:12:174,196,255,129,137,106,20,72,0,38	1/3:0,3,0,1:4:86,23,17,85,18,87,70,0,74,74	1/3:0,6,0,1:8:154,23,4,155,18,159,140,0,147,148
+chr21	35988750	chr21:35988750:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,0,0:12:0,32,255,24,255,255	0/1:5,6,0:15:197,0,129,132,155,255	0/2:2,2,6:13:207,88,130,0,30,34
+chr21	35990734	chr21:35990734:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:15:0,25,215	0/1:11,14:27:173,0,112	0/1:8,4:12:35,0,106
+chr21	35991721	chr21:35991721:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:36:0,84,255	0/1:11,13:27:246,0,174	0/1:16,16:34:255,0,255
+chr21	35999299	chr21:35999299:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,16:26:226,0,112	0/1:26,19:47:220,0,255	0/0:41,1:42:0,106,255
+chr21	36002580	chr21:36002580:M	AAAAAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<62>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:7,0:7:0,21,193	0/1:10,4:14:68,0,234
+chr21	36011661	chr21:36011661:M	TTTTTTTTTTTTTTTCTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,16:26:220,0,108	1/1:1,23:26:255,58,0	0/1:12,11:23:131,0,149
+chr21	36012783	chr21:36012783:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:26:198,0,124	0/1:11,16:28:206,0,110	0/0:22,1:24:0,52,255
+chr21	36015896	chr21:36015896:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,0:42:0,122,255	0/1:21,6:27:23,0,255	0/1:19,12:35:127,0,251
+chr21	36018714	chr21:36018714:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,3:12:20,36,187,0,105,123	2/2:0,0,9:9:157,182,255,26,27,0	0/1:8,11,0:21:158,0,82,212,120,255
+chr21	36022333	chr21:36022333:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:49:0,144,255	0/1:15,23:39:255,0,165	0/1:20,17:38:214,0,255
+chr21	36023845	chr21:36023845:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,2:14:0,6,178	0/1:5,2:7:13,0,64	0/1:4,8:13:100,0,41
+chr21	36026541	chr21:36026541:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0,0:24:0,70,255,72,255,255	0/1:8,7,1:17:85,0,94,85,121,255	0/2:16,1,12:32:255,210,255,0,255,255
+chr21	36027264	chr21:36027264:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19:34:255,0,162	0/1:32,25:58:255,0,255	0/0:54,1:57:0,149,255
+chr21	36028188	chr21:36028188:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,19:34:255,0,179	0/0:34,0:34:0,100,255	0/1:21,13:35:133,0,255
+chr21	36029251	chr21:36029251:M	AAAAAAAAAAAAAAGAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,6:32:89,0,255	0/1:2,10:13:229,0,13	0/0:13,0:15:0,42,255
+chr21	36037605	chr21:36037605:M	AAAAAAAAAAAAAAAATAGAAAAGAAAAAGAAAAAATAAAAATAAAAAA	<50>,<51>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1,0:10:0,9,128,24,151,227	0/2:3,2,3:10:55,21,67,0,39,79	0/1:2,7,0:9:97,0,9,103,35,152
+chr21	36041897	chr21:36041897:M	AAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,21,0:45:255,0,255,255,255,255	1/2:0,30,24:55:255,255,255,255,0,255	0/2:26,1,19:50:255,255,255,0,255,255
+chr21	36048718	chr21:36048718:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,2:14:16,0,143	1/1:0,7:9:120,14,0	0/1:9,4:13:33,0,123
+chr21	36052385	chr21:36052385:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:17,0,53	1/1:0,1:2:18,4,0	0/1:7,6:14:62,0,90
+chr21	36058506	chr21:36058506:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:187,0,174	0/1:11,9:25:180,0,255	0/0:21,0:22:0,66,255
+chr21	36062811	chr21:36062811:M	AAAACAAAACAAAACAAAACAAAA	<5.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:22,12:34:132,0,255	0/1:15,17:32:215,0,179	0/0:31,0:31:0,92,255
+chr21	36065532	chr21:36065532:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,8:22:82,0,183	0/1:9,14:24:173,0,95	0/0:22,1:23:0,50,255
+chr21	36070854	chr21:36070854:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>,<28>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,13:21:177,206,255,0,66,62	2/2:2,0,11:16:179,215,255,10,39,0	0/1:4,3,2:9:27,0,67,18,24,98
+chr21	36074330	chr21:36074330:M	TTTATTTATTTATTTATTTATTTGTTTGTTTGTTTGTTTGTTTATT	<10.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:7,3:10:27,0,103	1/1:0,13:13:233,38,0	0/1:20,7:27:50,0,255
+chr21	36076015	chr21:36076015:M	AACAACAACAACAA	<5.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:28,14:42:148,0,255	0/1:28,20:48:224,0,255	0/0:63,0:63:0,186,255
+chr21	36076746	chr21:36076746:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,21:45:255,0,255	0/1:22,17:39:185,0,255	0/0:47,1:48:0,123,255
+chr21	36079609	chr21:36079609:M	TTTTTTTTTGTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:146,0,184	0/1:25,14:40:129,0,255	0/0:37,0:37:0,109,255
+chr21	36080802	chr21:36080802:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,2:13:0,3,158	0/1:2,6:10:84,0,8	0/1:8,8:20:111,0,83
+chr21	36081135	chr21:36081135:M	AAAAAAAAAAAAAGAAAAAGAAAAGAAAAGAAAA	<33>,<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,15,0:28:198,0,161,255,239,255	1/2:0,15,10:26:255,251,209,255,0,255	0/2:11,1,7:19:141,160,255,0,180,255
+chr21	36082608	chr21:36082608:M	TTTTTTTTTTTTTTTTTTTTTT	<18>,<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7,4,1:21:255,0,144,84,111,234,255,90,174,255	2/3:0,0,7,7:15:255,251,255,121,195,167,195,121,0,166	0/3:5,0,0,1:8:7,28,195,18,184,181,0,97,95,77
+chr21	36084184	chr21:36084184:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:12:72,0,73	1/1:2,14:19:205,9,0	0/1:6,5:12:53,0,79
+chr21	36086854	chr21:36086854:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,51	0/1:1,3:4:37,0,5	1/1:0,1:1:17,3,0
+chr21	36089404	chr21:36089404:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:3:0,8,40	0/1:0,1:3:20,0,3	0/1:4,3:8:29,0,59
+chr21	36092423	chr21:36092423:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<12>,<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,3:7:159,44,24,51,0,31	1/2:0,1,3:5:102,42,28,26,0,13	1/2:0,2,5:8:167,71,52,29,0,9
+chr21	36096200	chr21:36096200:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,15:30:192,0,191	0/0:27,1:28:0,65,255	0/1:23,13:36:131,0,255
+chr21	36096365	chr21:36096365:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:17:192,32,0	0/1:8,8:19:70,0,59	0/0:12,1:15:0,23,149
+chr21	36112325	chr21:36112325:M	AAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,5,0:21:86,0,255,94,255,255	0/1:11,6,0:17:111,0,255,98,255,255	1/2:0,6,5:14:255,87,56,102,0,86
+chr21	36113676	chr21:36113676:M	CACACACACACACACACACACAC	<7.5>,<10.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:1,0,5:8:66,78,166,9,21,0	1/2:0,5,2:7:146,23,35,126,0,120	0/0:6,0,0:6:0,18,174,16,89,71
+chr21	36114246	chr21:36114246:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,4:9:45,68,222,0,69,45	0/1:1,1,0:7:43,0,18,26,11,33	1/2:0,7,5:15:255,86,108,195,0,174
+chr21	36115229	chr21:36115229:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,8,0:11:111,0,21,141,45,251	0/2:6,1,6:14:72,92,224,0,69,72	1/2:2,7,8:20:210,106,168,120,0,183
+chr21	36116142	chr21:36116142:M	TTTTTCTTTCTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:22,1:25:0,53,255	0/1:19,14:35:155,0,255
+chr21	36118512	chr21:36118512:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,6,57	0/1:4,3:9:63,0,92	0/0:2,0:4:0,12,84
+chr21	36122200	chr21:36122200:M	AAAAAAGAAAAAAAAAAAAAAAA	<22>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0,0:21:0,61,255,60,255,255	0/1:17,9,0:27:84,0,207,160,255,255	0/2:12,0,8:21:165,207,255,0,206,255
+chr21	36123192	chr21:36123192:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAAAATA	<11>,<12>	.	.	Motif=AAAT	GT:AD:DP:PL	0/2:7,0,12:19:178,199,255,0,133,80	0/1:3,4,0:7:97,0,65,72,53,107	2/2:1,0,9:10:152,155,182,11,29,0
+chr21	36124861	chr21:36124861:M	AAAAAAGAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,23:44:255,0,255	0/0:31,1:32:0,76,255	1/1:0,34:37:255,107,0
+chr21	36127575	chr21:36127575:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:12:0,35,209	0/0:12,0:12:0,35,200	0/1:4,4:8:45,0,45
+chr21	36128711	chr21:36128711:M	TTTTTCTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:23:0,57,255	0/1:9,6:18:49,0,96	0/0:30,0:31:0,90,255
+chr21	36131912	chr21:36131912:M	AAATAAATAAATAAATAAATAATTTAAAAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,9:26:71,0,119	0/1:7,5:18:38,0,68	1/1:0,25:33:255,45,0
+chr21	36133767	chr21:36133767:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,6,1:8:201,119,100,24,5,0,121,77,6,101	0/1:2,9,1,0:13:248,0,25,134,37,161,238,52,189,255	2/3:0,1,11,5:17:255,255,255,87,69,38,201,143,0,155
+chr21	36133848	chr21:36133848:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,69,0	1/1:1,9:10:139,12,0	0/1:12,11:23:129,0,147
+chr21	36136309	chr21:36136309:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12,1:31:144,0,247,172,255,255	0/2:7,2,11:21:255,161,238,0,101,157	1/2:1,14,13:29:255,214,155,198,0,185
+chr21	36137028	chr21:36137028:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,6:10:246,123,99,35,0,6	0/0:0,0,0:1:0,0,0,0,0,0	1/2:0,3,4:7:197,67,47,51,0,30
+chr21	36137467	chr21:36137467:M	AAAGAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAG	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:17,2:19:0,12,255	0/1:7,4:13:72,0,135	0/0:30,1:31:0,68,255
+chr21	36137504	chr21:36137504:M	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<7.5>,<11.5>,<12.5>,<13.5>	.	.	Motif=AAGG	GT:AD:DP:PL	2/4:0,0,19,0,11:30:255,255,255,191,255,248,255,255,190,255,255,255,0,255,255	3/4:1,0,1,6,12:20:255,255,255,255,255,255,150,210,192,154,95,113,67,0,56	1/2:0,27,17,0,0:44:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
+chr21	36138104	chr21:36138104:M	TTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTTGTTTTGTTT	<6.6>,<9.6>	.	.	Motif=TTTAG	GT:AD:DP:PL	0/1:14,10,0:24:210,0,255,253,255,255	0/0:21,0,0:21:0,63,255,62,255,255	1/2:0,13,14:27:255,255,255,255,0,255
+chr21	36138720	chr21:36138720:M	TTTTCTTTTCTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,16:18:255,15,0	0/0:3,0:4:0,9,88	0/1:5,9:16:226,0,104
+chr21	36139377	chr21:36139377:M	TTTTTCTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,4:13:36,41,221,0,81,94	0/2:7,0,7:15:74,114,255,0,117,84	1/2:2,7,6:20:238,71,145,158,0,186
+chr21	36139882	chr21:36139882:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:6:0,7,72	0/1:8,4:13:25,0,99	1/1:0,1:3:38,8,0
+chr21	36141262	chr21:36141262:M	AAAAAAAAAAAAAAA	<17>,<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,1,6,0:21:131,88,255,0,255,255,173,255,255,255	0/2:10,1,7,0:20:174,105,255,0,249,255,206,255,255,255	1/3:1,3,2,3:10:159,63,75,80,55,93,73,0,18,92
+chr21	36143880	chr21:36143880:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:12:122,0,28	0/1:3,6:12:139,0,43	0/1:5,3:8:54,0,105
+chr21	36145961	chr21:36145961:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1,0:11:0,4,229,21,158,150	1/2:1,5,3:10:160,25,34,75,0,66	0/0:9,0,0:10:0,30,255,29,191,166
+chr21	36146908	chr21:36146908:M	TCTCTCTCTCTCTCTCT	<5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:8,3:11:56,0,166	0/0:17,0:19:0,55,255	1/1:0,5:5:148,15,0
+chr21	36148538	chr21:36148538:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:27:0,79,255	0/1:14,12:28:128,0,182	0/0:20,0:23:0,64,255
+chr21	36152312	chr21:36152312:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:17:0,16,255	0/1:2,4:11:109,0,29	0/0:7,0:8:0,21,195
+chr21	36154077	chr21:36154077:M	AAAAAAAAAAAAAAAGAAAGAAAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0,1:17:0,37,255,21,209,181	0/1:11,9,0:20:203,0,255,152,186,255	2/2:0,1,8:11:152,127,124,26,9,0
+chr21	36154429	chr21:36154429:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13,0:27:166,0,166,238,205,255	0/2:12,0,11:24:139,204,255,0,177,141	1/1:4,24,0:28:255,10,0,255,72,255
+chr21	36155067	chr21:36155067:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,19,0:33:255,0,255,255,229,255	0/2:16,1,17:36:209,236,255,0,255,200	1/2:0,24,18:42:255,255,207,255,0,255
+chr21	36155104	chr21:36155104:M	TTTTTTTTTTGTTGTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:33:191,0,173	0/0:43,1:44:0,112,255	1/1:0,33:34:255,99,0
+chr21	36158803	chr21:36158803:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:27,0,204	0/0:9,0:12:0,29,255	1/1:0,11:15:255,36,0
+chr21	36161139	chr21:36161139:M	TGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/0:43,0:43:0,129,255	0/1:27,16:43:255,0,255
+chr21	36163345	chr21:36163345:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,1:15:0,19,255	0/0:17,0:18:0,54,255	1/1:0,3:5:99,14,0
+chr21	36163357	chr21:36163357:M	AAAGAAAGAAAGAAAG	<2.2>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:15,1:18:14,0,255	0/1:11,4:17:102,0,255	1/1:0,3:7:149,18,0
+chr21	36165719	chr21:36165719:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7,1:21:78,0,161,90,196,255	0/2:7,2,3:12:56,22,109,0,90,168	0/1:6,2,1:11:15,0,98,13,106,181
+chr21	36166437	chr21:36166437:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/1:13,12:25:139,0,156	0/0:34,0:35:0,103,255
+chr21	36167915	chr21:36167915:M	TTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,5:7:146,0,40	0/0:3,0:6:0,13,118	1/1:0,2:4:96,12,0
+chr21	36170609	chr21:36170609:M	ATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,0:36:0,89,255	0/0:16,0:16:0,48,255	0/1:21,16:39:255,0,255
+chr21	36170802	chr21:36170802:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,3:28:0,28,255	0/1:6,11:18:137,0,61	0/0:28,5:33:0,9,255
+chr21	36173425	chr21:36173425:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,0,6:19:56,110,255,0,204,186	0/0:22,0,0:24:0,47,255,66,255,255	1/2:1,12,6:20:255,99,130,199,0,255
+chr21	36173868	chr21:36173868:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,21:42:255,0,255	0/0:39,3:46:0,62,255	0/1:18,17:37:218,0,220
+chr21	36175117	chr21:36175117:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:26:146,0,255	0/0:26,1:28:0,47,255	0/1:20,16:38:255,0,255
+chr21	36176088	chr21:36176088:M	GTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTG	<23.5>,<27.5>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,14:19:255,255,255,53,53,0	1/2:0,17,13:32:255,255,255,255,0,255	2/2:0,0,13:19:255,255,255,51,51,0
+chr21	36178438	chr21:36178438:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:28:125,0,226	0/1:12,11:24:127,0,145	0/0:32,3:36:0,51,255
+chr21	36180579	chr21:36180579:M	AAAAAAAGAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:16,20:36:255,0,185	0/1:22,22:44:255,0,255
+chr21	36180886	chr21:36180886:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,17:36:222,0,208	0/0:26,1:28:0,64,255	0/1:16,15:35:184,0,206
+chr21	36183867	chr21:36183867:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,5:17:105,0,186	0/1:11,8:22:154,0,255	0/0:32,0:34:0,101,255
+chr21	36190010	chr21:36190010:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:15:63,0,100	0/1:7,3:12:28,0,87	0/0:11,1:13:0,10,165
+chr21	36191256	chr21:36191256:M	AAAAAAAAAAAAACAAAAAACAGAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	0/1:13,13:26:154,0,153	0/1:15,20:35:255,0,170
+chr21	36192392	chr21:36192392:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:18:164,0,179	0/0:19,0:22:0,60,255	0/1:10,4:14:66,0,231
+chr21	36192694	chr21:36192694:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:20:156,0,92	0/0:39,0:39:0,115,255	0/1:17,9:26:89,0,235
+chr21	36194488	chr21:36194488:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<20>,<23>	.	.	Motif=T	GT:AD:DP:PL	3/4:0,1,1,5,3:11:162,164,175,130,123,122,41,38,41,54,73,79,46,0,121	1/2:1,3,3,2,0:10:43,38,64,16,0,27,11,12,18,113,66,82,55,135,235	0/4:5,0,0,0,5:13:127,142,182,131,164,160,110,155,152,213,0,55,35,104,131
+chr21	36195341	chr21:36195341:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:5:37,0,20	0/0:2,0:3:0,8,44	0/1:4,2:9:20,0,64
+chr21	36199443	chr21:36199443:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,16:45:255,0,255	0/1:24,8:33:107,0,255	0/0:23,0:23:0,69,255
+chr21	36206011	chr21:36206011:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:35:255,66,0	0/1:23,18:44:201,0,255	0/1:14,20:34:255,0,156
+chr21	36206530	chr21:36206530:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,14:27:193,0,122	0/1:8,9:18:111,0,86	0/0:32,0:33:0,97,255
+chr21	36217075	chr21:36217075:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:78,2,0	0/1:5,3:8:26,0,60	1/1:1,6:7:85,3,0
+chr21	36220668	chr21:36220668:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:74,0,65	0/1:13,9:24:104,0,155	1/1:0,19:22:255,61,0
+chr21	36228766	chr21:36228766:M	AAAATAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<10.4>,<11.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,9,0:9:255,27,0,198,27,175	1/2:0,2,7:9:158,107,101,36,0,10	1/1:0,12,0:12:255,36,0,255,35,227
+chr21	36231845	chr21:36231845:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:18:255,54,0	1/1:0,11:14:255,38,0	1/1:0,18:18:255,54,0
+chr21	36236751	chr21:36236751:M	TTTTTTTCTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<45>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:112,20,0	0/1:2,4:6:47,0,15	1/1:0,3:4:61,11,0
+chr21	36241676	chr21:36241676:M	TTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTT	<35>,<36>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,9:15:255,133,115,94,0,55	1/1:0,6,0:6:164,18,0,117,18,101	1/2:0,8,3:12:241,44,17,142,0,112
+chr21	36242152	chr21:36242152:M	ATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:11,0:11:0,32,195	0/1:12,12:24:149,0,149
+chr21	36243350	chr21:36243350:M	TTTTTTTTTCCTTTTCTTCTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:26:0,58,255	0/1:12,5:19:31,0,168	0/0:20,1:22:0,44,255
+chr21	36246844	chr21:36246844:M	TTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTAT	<8.8>,<9.8>	.	.	Motif=TTATG	GT:AD:DP:PL	1/1:0,23,0:24:255,70,0,255,69,255	1/1:0,20,0:21:255,63,0,255,62,255	1/2:0,10,7:17:255,112,82,186,0,139
+chr21	36257588	chr21:36257588:M	TAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAAGTAGTTAGGTAAATAGATAGAT	<14>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:12,4:16:55,0,253	0/1:10,3:13:38,0,212	0/1:11,5:16:80,0,228
+chr21	36260154	chr21:36260154:M	AAAAAGAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:34:243,0,180	1/1:1,30:33:255,79,0	0/1:14,13:27:157,0,175
+chr21	36272650	chr21:36272650:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:3,0,117	0/1:6,3:11:18,0,88	0/0:18,0:18:0,53,255
+chr21	36286640	chr21:36286640:M	ACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,10:20:124,0,124	1/1:0,26:27:255,79,0	0/1:15,13:29:160,0,182
+chr21	36289425	chr21:36289425:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<26.5>,<27.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,0,8:13:255,216,204,255,144,255,147,0,147,123	1/2:1,11,5,1:18:255,77,120,255,0,255,255,78,255,255	2/3:1,0,8,5:15:245,255,255,73,92,48,104,155,0,114
+chr21	36302779	chr21:36302779:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:6:139,18,0	1/1:0,6:6:171,18,0	1/1:0,3:5:99,12,0
+chr21	36305752	chr21:36305752:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:22:0,46,255	0/1:12,11:23:126,0,143	0/1:17,21:38:255,0,196
+chr21	36306937	chr21:36306937:M	AAAAAAAAAAAAAAGAAAAAGAAAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,11:19:145,197,255,0,124,91	1/2:0,10,4:15:209,76,79,169,0,230	0/1:13,13,1:28:161,0,163,218,178,255
+chr21	36307652	chr21:36307652:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:21:0,61,255	0/1:9,6:21:132,0,219	0/1:4,3:10:60,0,101
+chr21	36308874	chr21:36308874:M	TTTATTTATTTATTTATTTATTTATTTATTTATTT	<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:8,5:13:100,0,186	0/1:13,3:16:36,0,255	1/1:0,9:9:254,27,0
+chr21	36309316	chr21:36309316:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:6:19,0,54	0/1:1,1:2:11,0,11	1/1:0,14:16:255,47,0
+chr21	36310424	chr21:36310424:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,14:34:255,0,255	0/0:23,0:23:0,69,255	0/1:26,4:31:31,0,255
+chr21	36313320	chr21:36313320:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,6:24:34,0,243	0/0:18,0:25:0,68,255	0/0:20,3:25:0,9,255
+chr21	36318465	chr21:36318465:M	AAAAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/1:9,9:19:108,0,102	0/0:23,0:23:0,68,255
+chr21	36327156	chr21:36327156:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:3:0,6,45	1/1:0,5:6:159,15,0	0/0:3,0:5:0,9,94
+chr21	36328343	chr21:36328343:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:8:0,23,125	0/1:2,3:6:39,0,13	0/1:8,4:12:27,0,88
+chr21	36328907	chr21:36328907:M	AAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,13:23:255,0,131	0/1:10,8:22:165,0,226	0/1:12,8:24:153,0,255
+chr21	36329295	chr21:36329295:M	AAAAACAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:22:0,65,255	0/1:11,16:30:255,0,236	0/0:22,0:25:0,74,255
+chr21	36331602	chr21:36331602:M	AAAAAAACAAAAAACAAACAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:21:186,0,255	0/1:13,13:27:255,0,255	0/1:17,14:31:255,0,255
+chr21	36332791	chr21:36332791:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10:27:116,0,216	0/1:11,4:17:32,0,154	0/1:16,8:25:71,0,226
+chr21	36335311	chr21:36335311:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:22,0,51	0/1:2,2:7:64,0,43	0/1:6,3:10:72,0,151
+chr21	36343093	chr21:36343093:M	GTTTTTTTGTTTGTTTGTTTG	<5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:24,18:42:255,0,255	0/1:22,18:40:255,0,255	0/1:19,27:46:255,0,255
+chr21	36343450	chr21:36343450:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:26:185,0,255	0/1:14,9:24:184,0,255	0/1:9,18:30:255,0,172
+chr21	36347008	chr21:36347008:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:19:11,0,171	0/0:11,0:15:0,41,221	0/1:7,6:15:62,0,92
+chr21	36350543	chr21:36350543:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,6:16:70,0,115	0/1:10,7:18:77,0,118	0/1:6,8:16:97,0,71
+chr21	36370599	chr21:36370599:M	ATATACATACATACATATATATATATATATATATATATATAT	<18.5>,<20.5>,<21.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,3,1,0:9:47,0,85,46,19,56,52,11,51,67	0/1:1,1,0,0:2:18,0,18,18,5,19,21,5,21,26	2/3:0,0,4,3:8:18,36,143,9,31,11,19,43,0,31
+chr21	36370670	chr21:36370670:M	TTCTTCTTCTTCTT	<6.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:4,3:7:50,0,75	1/1:0,0:1:7,2,0	1/1:0,2:2:47,6,0
+chr21	36371799	chr21:36371799:M	TGTTTTGTTTTGTTTTGTTTTTTTTTTTT	<5.6>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:9,11:20:157,0,118	0/0:17,1:18:0,33,255	0/1:8,12:22:179,0,100
+chr21	36381288	chr21:36381288:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,3:18:255,69,51,240,0,255	0/1:13,17,1:31:211,0,149,255,177,255	1/2:2,10,11:25:255,174,250,157,0,233
+chr21	36382523	chr21:36382523:M	TTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTT	<21>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,5:22:255,103,100,255,0,255	0/2:7,0,4:11:37,69,255,0,120,89	1/2:0,17,8:25:255,140,153,255,0,255
+chr21	36382695	chr21:36382695:M	TTATTATTATTATTATTATTATTATT	<7.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:10,20:30:255,0,105	0/1:11,14:26:188,0,124	0/1:13,16:30:222,0,157
+chr21	36383088	chr21:36383088:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:233,40,0	0/1:3,4:8:48,0,30	1/1:1,10:12:166,17,0
+chr21	36388469	chr21:36388469:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:11:100,0,111	0/1:7,2:11:27,0,159	0/1:3,4:8:92,0,57
+chr21	36389760	chr21:36389760:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/1:9,5:16:86,0,189	0/0:8,0:18:0,32,245
+chr21	36396654	chr21:36396654:M	AAAAAAAAAAGAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,14:27:174,0,156	0/0:39,0:42:0,122,255	0/1:11,12:23:146,0,128
+chr21	36397392	chr21:36397392:M	GTGTGTGTGTGT	<6.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:22,23:45:177,0,163	0/0:57,0:57:0,160,255	0/1:17,31:48:255,0,89
+chr21	36397720	chr21:36397720:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:9,0,26	0/1:3,3:6:33,0,33	0/0:2,0:4:0,11,58
+chr21	36404097	chr21:36404097:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,1:13:0,6,134	0/0:9,0:10:0,26,150	0/1:3,3:8:28,0,52
+chr21	36404400	chr21:36404400:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,9:30:86,0,255	0/0:34,1:36:0,88,255	0/1:12,11:25:125,0,162
+chr21	36404733	chr21:36404733:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:3:29,3,0	1/1:0,2:4:82,12,0	1/1:0,3:6:109,14,0
+chr21	36407301	chr21:36407301:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:14:16,0,141	0/0:12,2:14:0,7,171	0/1:8,6:16:68,0,104
+chr21	36411117	chr21:36411117:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:25:255,71,0	1/1:1,32:34:255,82,0	1/1:0,25:27:255,76,0
+chr21	36417329	chr21:36417329:M	TTTTTTTTCTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/0:33,0:35:0,100,255	0/1:18,24:43:255,0,255
+chr21	36418849	chr21:36418849:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:13:29,0,101	0/0:9,0:9:0,26,155	0/1:12,10:23:118,0,145
+chr21	36420337	chr21:36420337:M	TTCATTCATTCATTCATTCATTCATTCATTCATTCA	<10>,<11>	.	.	Motif=TTCA	GT:AD:DP:PL	0/2:21,0,10:31:202,191,255,0,255,255	1/2:0,10,9:19:255,162,109,154,0,127	0/1:17,21,0:38:255,0,211,255,255,255
+chr21	36433912	chr21:36433912:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18:40:233,0,255	0/0:23,0:26:0,75,255	0/1:11,14:26:182,0,136
+chr21	36436383	chr21:36436383:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:5:47,0,40	0/1:3,3:6:58,0,62	0/1:1,1:2:20,0,21
+chr21	36436914	chr21:36436914:M	ATATATATATA	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:40:255,118,0	0/1:21,18:39:199,0,246	1/1:0,40:40:255,118,0
+chr21	36437842	chr21:36437842:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:19,0:23:0,66,255	0/1:9,5:14:48,0,119
+chr21	36438131	chr21:36438131:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6,1:13:97,0,14,98,6,173	0/2:2,0,5:9:64,83,151,0,28,13	1/2:3,8,3:19:140,15,50,120,0,217
+chr21	36441053	chr21:36441053:M	CCCCGCCCCCACCCCC	<3.7>	.	.	Motif=CCCCAC	GT:AD:DP:PL	0/1:13,4:17:26,0,192	0/1:11,13:24:163,0,127	0/1:9,12:21:161,0,104
+chr21	36442154	chr21:36442154:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:19:18,0,220	0/0:28,1:30:0,70,255	0/1:17,10:29:101,0,229
+chr21	36443922	chr21:36443922:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:8:192,23,0	1/1:0,4:6:128,15,0	1/1:0,6:6:170,18,0
+chr21	36444734	chr21:36444734:M	AAAAAAAAAAAAAAAAAAA	<20>,<25>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,1,4,0:6:94,84,94,0,0,27,97,97,39,134	1/3:1,1,0,3:7:86,67,74,83,73,118,10,0,48,39	1/2:1,3,2,0:9:74,37,40,32,0,83,83,51,90,139
+chr21	36448351	chr21:36448351:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,4:10:64,24,118,0,34,41	0/1:2,3,0:6:68,0,41,50,33,69	0/2:5,0,3:9:25,43,175,0,92,69
+chr21	36448769	chr21:36448769:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:54,0:55:0,162,255	0/1:26,13:39:116,0,255	0/0:51,4:57:0,94,255
+chr21	36449331	chr21:36449331:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,98,255	0/1:13,10:27:201,0,255	0/0:35,0:36:0,108,255
+chr21	36450532	chr21:36450532:M	AAAAAAACAAAACAAAACAAAACAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:11,11:22:236,0,238	0/0:31,0:31:0,93,255
+chr21	36450893	chr21:36450893:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:32:0,75,255	0/1:13,9:23:94,0,178	0/0:34,0:35:0,103,255
+chr21	36451305	chr21:36451305:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3:8:31,53,168,0,66,49	0/1:6,3,2:12:63,0,161,51,67,128	0/2:5,0,3:9:36,52,201,0,84,61
+chr21	36454621	chr21:36454621:M	ACACACACACACACACACACACACACACACACACACACACACAC	<14>,<17>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,20:40:255,255,255,255,0,255	0/2:5,0,10:16:255,255,255,0,125,92	1/2:0,17,10:28:255,255,217,255,0,255
+chr21	36457708	chr21:36457708:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:91,0,31	0/1:3,7:10:89,0,21	0/1:4,6:10:74,0,40
+chr21	36459018	chr21:36459018:M	CAAACAAACAAACAAA	<3>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:14,21:35:255,0,168	0/0:24,0:24:0,71,255	0/1:16,17:33:223,0,204
+chr21	36459962	chr21:36459962:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:26:225,0,252	0/0:17,0:19:0,56,255	0/1:14,6:26:102,0,255
+chr21	36476456	chr21:36476456:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,15:18:252,16,0	1/1:2,24:26:255,41,0	1/1:1,18:20:255,31,0
+chr21	36485854	chr21:36485854:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,19:46:230,0,255	0/0:34,1:39:0,92,255	0/1:22,17:41:183,0,255
+chr21	36488221	chr21:36488221:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<15.5>,<16.5>	.	.	Motif=CCTT	GT:AD:DP:PL	1/1:0,4,0:5:123,12,0,83,12,72	1/2:0,2,0:5:96,22,11,49,0,36	2/2:0,0,3:4:95,61,53,9,9,0
+chr21	36489118	chr21:36489118:M	AAAAAAAAAAAAAAA	<16>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,7:9:246,245,244,27,27,0	1/2:0,3,0:4:39,14,6,32,0,76	1/2:0,2,5:9:146,132,134,12,0,41
+chr21	36490945	chr21:36490945:M	CACAGACACACACACACACACACACACACACACACACACACACAC	<20.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,6,6:12:255,93,75,109,0,75	1/1:0,22,0:24:255,72,0,255,70,255	1/2:0,14,8:25:255,121,70,255,0,221
+chr21	36496437	chr21:36496437:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12,0:15:255,42,0,255,41,238	1/2:0,3,3:6:118,42,33,50,0,33	1/2:0,3,7:12:194,102,87,68,0,39
+chr21	36501924	chr21:36501924:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,114,0	1/1:0,37:40:255,116,0	1/1:1,38:40:255,99,0
+chr21	36514623	chr21:36514623:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,12:14:255,41,0	1/1:0,12:15:255,44,0	1/1:0,8:10:235,25,0
+chr21	36515790	chr21:36515790:M	TTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:118,12,0	1/1:0,4:6:118,13,0	1/1:0,5:6:157,18,0
+chr21	36518076	chr21:36518076:M	ACACACACACACACACACACACACACACACACAC	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,15,20:35:255,255,255,255,0,178	2/2:0,2,29:32:255,255,255,95,58,0	1/1:0,37,0:38:255,114,0,255,112,255
+chr21	36518598	chr21:36518598:M	CAAACAAACAAACAAACAAACAA	<6.8>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,32:34:255,70,0	1/1:0,31:34:255,54,0	1/1:0,36:39:255,69,0
+chr21	36519710	chr21:36519710:M	AAAAACAACAACAACAACAACAACAAAACCCCAAAAACAAAAA	<7.7>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,24:24:255,71,0	1/1:0,30:30:255,89,0	1/1:0,27:30:255,80,0
+chr21	36523760	chr21:36523760:M	AAAGAAAGAAAGAGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	.	1/1:0,4:4:58,11,0	0/0:0,0:3:0,0,0
+chr21	36524115	chr21:36524115:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,33:38:255,55,0	1/1:0,40:40:255,117,0	0/1:18,31:51:255,0,198
+chr21	36532398	chr21:36532398:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,48,0:49:255,126,0,255,144,255	1/1:1,28,0:29:255,67,0,255,84,255	1/2:1,30,18:49:255,255,255,255,0,255
+chr21	36535390	chr21:36535390:M	AAATAAATACATAAATAAATAAAAGTAAAAAATAAA	<8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:0,28:29:255,82,0	0/1:11,18:31:240,0,114
+chr21	36537630	chr21:36537630:M	TTTTTTCTTTGTTTTTCTTTTCTTTTCTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:172,18,0	1/1:0,1:2:29,3,0	0/0:19,0:19:0,57,255
+chr21	36537990	chr21:36537990:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,17,10:39:255,184,150,255,0,255	1/2:0,21,6:35:255,145,54,255,0,255	0/1:17,16,0:35:255,0,255,255,255,255
+chr21	36539312	chr21:36539312:M	GAGTGAGTGCGTGTGGAGTGTGTGTGGAGTGAGTGTGTGTGGAGTGAGTGTATGTGCGGAGTGAGTGTGTGTGGAGTGAGTG	<2.2>	.	.	Motif=GAGT	GT:AD:DP:PL	1/1:1,18:19:255,32,0	1/1:0,18:22:255,54,0	1/1:1,14:19:255,20,0
+chr21	36552674	chr21:36552674:M	AAAACAAGACAAAAACAAAACAAAACAAAACAAAACAAAA	<7>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,24:24:255,71,0	1/1:0,48:48:255,142,0
+chr21	36555807	chr21:36555807:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,4:23:255,98,34,155,0,90	1/1:0,15,5:24:255,71,0,212,9,145	1/2:0,13,7:25:255,131,60,149,0,75
+chr21	36555851	chr21:36555851:M	GAGAGAGAGAGAG	<8.5>,<9.5>	.	.	Motif=GA	GT:AD:DP:PL	2/2:0,0,4:5:137,82,69,15,14,0	2/2:0,0,5:7:183,111,93,21,20,0	1/2:0,6,1:8:178,26,3,84,0,62
+chr21	36555863	chr21:36555863:M	GTGTGTGTGTGTGTG	<6.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,16:21:130,0,1	0/1:8,15:23:109,0,29	0/1:16,17:34:116,0,93
+chr21	36559173	chr21:36559173:M	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<5.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,24:25:255,74,0	1/1:0,35:35:255,105,0	1/1:0,31:31:255,93,0
+chr21	36560224	chr21:36560224:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:2,42:45:255,97,0	1/1:2,43:48:255,104,0
+chr21	36562698	chr21:36562698:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:43:255,126,0	1/1:0,40:43:255,122,0	1/1:0,43:48:255,135,0
+chr21	36565422	chr21:36565422:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:22:255,66,0	1/1:0,33:37:255,104,0	1/1:0,43:47:255,132,0
+chr21	36569416	chr21:36569416:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:34:0,95,255	0/0:31,0:31:0,93,255	0/1:15,7:23:123,0,255
+chr21	36573301	chr21:36573301:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:14:255,11,0	1/1:1,11:18:255,14,0	0/1:9,3:12:48,0,222
+chr21	36577422	chr21:36577422:M	AAAAAAAAAAAAGAAAAGAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,24:27:255,42,0	1/1:1,26:27:255,62,0	1/1:0,27:27:255,79,0
+chr21	36585863	chr21:36585863:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<11.2>,<13.2>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:9,11,0:23:233,0,171,236,112,255	0/1:3,8,0:11:180,0,45,171,37,188	0/2:3,0,5:10:48,54,160,0,27,13
+chr21	36595125	chr21:36595125:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:4:84,11,0	1/1:0,4:6:142,18,0	0/1:1,1:4:29,0,30
+chr21	36597906	chr21:36597906:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	1/1:0,7:9:141,26,0	0/1:4,6:12:80,0,47
+chr21	36598426	chr21:36598426:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,3:35:0,45,255	0/1:17,14:31:154,0,207	0/0:25,0:25:0,74,255
+chr21	36601775	chr21:36601775:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,1,42:44:255,255,255,111,111,0	2/2:0,1,30:31:255,255,255,91,73,0	1/2:0,21,22:43:255,255,255,255,0,255
+chr21	36603712	chr21:36603712:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:39,0:41:0,122,255	0/0:26,0:26:0,78,255	0/1:17,9:28:179,0,255
+chr21	36612458	chr21:36612458:M	TTATATTATATTATATTATATTATATTAT	<7.8>,<10.8>	.	.	Motif=TTATA	GT:AD:DP:PL	1/2:0,5,3:8:223,85,69,139,0,132	1/1:0,2,0:4:86,12,0,86,11,86	2/2:0,0,5:5:156,156,156,15,15,0
+chr21	36615947	chr21:36615947:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:30:255,78,0	1/1:0,31:31:255,91,0	1/1:0,50:50:255,147,0
+chr21	36623256	chr21:36623256:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:1,25:29:255,64,0	1/1:0,29:30:255,88,0
+chr21	36629951	chr21:36629951:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:62,0,89	0/1:4,3:8:48,0,72	0/0:11,0:16:0,41,255
+chr21	36629976	chr21:36629976:M	AAAGAAAGAAAGAAAG	<2.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:13,2:15:4,0,255	0/1:15,5:20:59,0,255	0/1:28,4:32:1,0,255
+chr21	36630329	chr21:36630329:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:7:22,0,45	0/1:5,5:11:46,0,58	0/0:12,2:16:0,11,168
+chr21	36634376	chr21:36634376:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:8:131,8,0	1/1:0,2:3:54,6,0	0/0:3,0:6:0,12,97
+chr21	36635067	chr21:36635067:M	TTTTTGTTTTATTTTAGTTTTTGTTTT	<3>	.	.	Motif=TTTTAG	GT:AD:DP:PL	0/1:9,12:23:255,0,155	0/1:14,6:21:104,0,255	0/0:25,1:27:0,49,255
+chr21	36638487	chr21:36638487:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:73,9,0	1/1:0,4:6:127,15,0	0/1:1,2:7:73,0,14
+chr21	36640229	chr21:36640229:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,11:21:255,205,147,160,0,127	1/2:2,18,20:40:255,255,241,234,0,226	0/1:28,18,0:46:197,0,255,255,255,255
+chr21	36644630	chr21:36644630:M	ATATATATATATGTGTATATATATATGTATATGTATGTATATATATGTGTATATAT	<29>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,6:16:96,23,0	1/1:0,6:9:79,18,0	0/0:9,1:13:0,12,95
+chr21	36644685	chr21:36644685:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:19,0,9:29:190,143,255,0,255,255	0/1:8,15,0:24:255,0,158,224,204,255	0/2:22,0,16:38:255,233,255,0,255,255
+chr21	36645694	chr21:36645694:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<11.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,5,15:20:255,255,255,137,0,93	1/2:0,3,4:8:145,77,110,80,0,65	0/1:13,2,1:16:13,0,255,37,209,225
+chr21	36645755	chr21:36645755:M	TATATATATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:14:207,138,111,35,30,0	2/2:0,0,8:13:144,93,78,14,18,0	1/1:3,14,3:21:139,25,0,87,16,122
+chr21	36645772	chr21:36645772:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<12.5>,<15.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,13,10:24:255,115,197,255,0,255	1/2:0,6,9:18:255,110,198,165,0,135	0/1:9,9,6:28:206,0,255,160,20,216
+chr21	36649303	chr21:36649303:M	TTTTTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,6:14:255,118,151,173,0,152	1/2:0,1,4:6:95,69,101,36,0,24	0/2:3,0,5:9:77,99,228,0,54,28
+chr21	36650763	chr21:36650763:M	AAAAAAAAAAGAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,14:36:162,0,255	0/1:17,11:29:118,0,213	0/0:30,0:30:0,88,255
+chr21	36651873	chr21:36651873:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:15,13:30:166,0,202	0/1:20,6:26:35,0,255	0/1:18,5:24:24,0,255
+chr21	36656169	chr21:36656169:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,23:46:255,0,255	0/1:24,20:44:227,0,255	0/0:35,0:35:0,103,255
+chr21	36657147	chr21:36657147:M	AAAAAAAAAAAAAAAA	<17>,<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,4,2:9:171,90,69,46,0,28,89,25,18,97	2/3:0,1,10,2:14:255,214,183,41,26,5,170,126,0,143	0/3:8,0,0,9:18:214,235,255,157,255,255,0,149,221,198
+chr21	36657951	chr21:36657951:M	AAAAAAAAAAAAAAAACAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,5:16:255,80,46,143,0,137	1/2:0,3,5:8:167,84,62,43,0,28	0/2:5,1,5:11:110,71,129,0,72,113
+chr21	36658195	chr21:36658195:M	TTTATTTATTTTTTATATATTTATATATTTATAAATATTTTTATTTATTTATT	<14>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:5,5:10:78,0,75	1/1:0,1:1:22,3,0	1/1:0,1:3:22,3,0
+chr21	36659451	chr21:36659451:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,9:16:113,0,61	1/1:1,14:17:236,33,0	0/1:14,3:17:1,0,190
+chr21	36661240	chr21:36661240:M	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	<7.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,11:12:160,34,0	1/1:0,15:15:199,42,0	0/1:5,5:10:39,0,39
+chr21	36661504	chr21:36661504:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:8:131,41,26,66,0,48	1/1:0,6,1:7:160,18,0,98,5,79	0/2:4,0,4:8:41,53,150,0,64,41
+chr21	36661524	chr21:36661524:M	AAGAAGAAGAAGAAAAAGAAAAGAA	<10.3>	.	.	Motif=AAG	GT:AD:DP:PL	0/0:9,0:10:0,27,218	0/0:15,0:15:0,45,255	0/1:7,5:16:70,0,189
+chr21	36664510	chr21:36664510:M	ACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11,0:16:152,35,0,187,38,255	1/1:0,13,0:22:188,44,0,233,48,255	1/2:2,5,6:14:145,108,135,47,0,148
+chr21	36664552	chr21:36664552:M	AGAGAGAGAAAGAGCGAGAGAGA	<13.5>,<16.5>,<18.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,0,9,18:27:255,255,255,255,255,255,209,209,0,140	2/3:0,0,8,5:13:255,255,255,115,115,81,183,183,0,154	1/3:0,10,1,15:27:255,255,255,255,255,255,229,0,231,209
+chr21	36665099	chr21:36665099:M	TCTCTCTCTCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:11,12:30:255,0,167	0/1:6,8:19:166,0,83	0/1:11,17:37:255,0,177
+chr21	36665121	chr21:36665121:M	TTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,17:25:255,0,2	1/1:0,17:21:255,28,0	0/1:10,14:26:255,0,208
+chr21	36665702	chr21:36665702:M	ATATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13,0:23:197,35,0,226,34,255	1/1:0,6,0:9:97,22,0,111,23,138	2/2:0,2,10:18:20,39,214,2,5,0
+chr21	36665725	chr21:36665725:M	TTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,9:15:255,221,201,29,15,0	1/2:0,1,3:6:110,71,62,23,0,10	1/1:0,8,1:13:242,26,0,184,2,167
+chr21	36668367	chr21:36668367:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,7:21:67,109,255,0,183,188	0/2:14,1,6:22:51,94,255,0,186,191	0/1:16,13,0:30:157,0,200,240,241,255
+chr21	36672834	chr21:36672834:M	ACACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/0:31,1:33:0,79,255	0/1:15,10:25:88,0,169	0/0:23,0:24:0,70,255
+chr21	36673359	chr21:36673359:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,17:30:235,0,132	0/0:25,2:30:0,49,255	0/0:24,2:27:0,33,255
+chr21	36675129	chr21:36675129:M	TTTTTTTTTCTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,32:33:255,97,0	1/1:0,33:33:255,97,0
+chr21	36690462	chr21:36690462:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:8:62,0,21	0/1:4,7:12:80,0,42	0/1:1,7:10:92,0,0
+chr21	36700284	chr21:36700284:M	TTTCTCTCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTCCTCTTTCTTTCATTCT	<18.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,11:11:131,30,0	1/1:0,6:6:71,16,0	1/1:0,10:10:119,27,0
+chr21	36702943	chr21:36702943:M	AAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,11,0:26:123,0,188,197,255,255	1/2:0,6,5:11:213,128,110,102,0,147	0/0:27,0,0:28:0,82,255,84,255,255
+chr21	36716861	chr21:36716861:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,11:30:118,0,255	0/1:15,8:25:77,0,202	0/0:36,0:37:0,108,255
+chr21	36719947	chr21:36719947:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,14:29:180,0,198	0/1:16,18:34:222,0,186	0/0:39,0:39:0,115,255
+chr21	36733561	chr21:36733561:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:19:99,0,107	0/1:10,13:24:153,0,111	0/0:24,1:29:0,66,255
+chr21	36736712	chr21:36736712:M	CTTCCTTCCCTTCCTTCCCTCCTTCCCTTCC	<9>	.	.	Motif=CTTC	GT:AD:DP:PL	0/0:29,0:30:0,82,255	0/1:12,11:27:73,0,115	0/0:22,0:24:0,65,255
+chr21	36739982	chr21:36739982:M	AGAAAGAAGAGAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA	<15.8>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:4,2:6:39,0,95	1/1:0,5:6:128,4,0	0/0:9,0:9:0,27,255
+chr21	36744312	chr21:36744312:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:16:112,0,76	0/0:9,0:11:0,29,161	0/1:12,4:16:22,0,161
+chr21	36758984	chr21:36758984:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:25:0,55,255	0/1:18,8:26:64,0,240	0/0:37,1:39:0,96,255
+chr21	36760610	chr21:36760610:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:20:0,58,255	0/0:15,1:19:0,33,250	0/1:12,9:22:94,0,156
+chr21	36771997	chr21:36771997:M	AAAAAAAAAAAACAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,79,255	0/1:19,11:31:109,0,237	0/0:31,0:32:0,94,255
+chr21	36772639	chr21:36772639:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:46,0,18	1/1:0,1:2:28,6,0	0/0:9,1:11:0,15,147
+chr21	36772980	chr21:36772980:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,1,4:13:34,53,201,0,103,117	1/2:1,4,2:7:68,19,38,53,0,96	0/0:8,1,0:9:0,9,123,26,126,153
+chr21	36781260	chr21:36781260:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10,0:20:133,0,103,187,136,255	1/1:2,11,0:18:199,15,0,237,45,255	0/2:11,1,11:23:125,172,255,0,144,137
+chr21	36783796	chr21:36783796:M	TGCACATGCACACACACACATGCACATACACA	<5.7>	.	.	Motif=TGCACA	GT:AD:DP:PL	0/1:9,16:34:63,0,10	0/1:11,14:35:48,0,25	0/0:29,0:39:0,67,218
+chr21	36784312	chr21:36784312:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:14:0,25,255	0/1:12,13:28:255,0,255	0/0:12,1:18:0,4,255
+chr21	36786284	chr21:36786284:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,25:48:255,0,250	0/1:15,23:40:255,0,157	0/0:37,2:40:0,81,255
+chr21	36796869	chr21:36796869:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:18,2:22:0,28,255	0/1:12,13:27:178,0,142
+chr21	36801783	chr21:36801783:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,1,0:51:0,119,255,148,255,255	0/1:18,16,0:35:193,0,215,255,255,255	0/2:30,1,19:52:218,255,255,0,255,255
+chr21	36803755	chr21:36803755:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,40:42:255,103,0	1/1:1,39:42:255,105,0	1/1:1,36:38:255,94,0
+chr21	36808047	chr21:36808047:M	AAAATAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:30:255,70,0	1/1:0,33:35:255,102,0	1/1:1,38:40:255,99,0
+chr21	36816396	chr21:36816396:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:39:218,0,255	0/0:38,2:43:0,82,255	1/1:5,32:40:255,26,0
+chr21	36823611	chr21:36823611:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<25>	.	.	Motif=GT	GT:AD:DP:PL	0/2:4,0,3:11:87,78,181,0,105,96	0/0:22,0,0:26:0,77,255,77,255,255	1/2:0,4,8:15:255,209,188,118,0,89
+chr21	36827574	chr21:36827574:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:24:184,0,93	0/0:23,1:25:0,56,255	1/1:1,14:16:239,29,0
+chr21	36827798	chr21:36827798:M	TTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,11:20:144,0,106	0/0:12,1:13:0,21,192	1/1:0,10:11:170,23,0
+chr21	36828367	chr21:36828367:M	GAATGAATGAATGAATGAATGAATGAATGAATGAATGAGTGAATAAATG	<11.2>,<14.2>	.	.	Motif=GAAT	GT:AD:DP:PL	0/2:18,0,7:25:127,181,255,0,255,255	0/1:11,11,0:22:136,0,136,199,198,255	0/2:8,0,6:14:132,157,255,0,148,188
+chr21	36830822	chr21:36830822:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:5,0,11	1/1:0,3:6:57,5,0	.
+chr21	36833594	chr21:36833594:M	TATATATATATATATATATAT	<12>,<14>	.	.	Motif=TA	GT:AD:DP:PL	0/0:18,0,1:20:0,56,255,31,255,255	0/0:14,0,0:14:0,42,255,42,255,255	1/2:0,8,7:16:255,178,149,195,0,196
+chr21	36838299	chr21:36838299:M	CACACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:17,0:19:0,56,255	0/0:30,0:30:0,90,255	0/1:19,13:37:253,0,255
+chr21	36838704	chr21:36838704:M	AAAAGAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,16:27:205,0,93	0/0:27,2:29:0,52,255	1/1:1,23:28:255,52,0
+chr21	36848272	chr21:36848272:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,7:18:76,0,143	0/0:15,2:21:0,26,255	1/1:2,16:19:255,20,0
+chr21	36855369	chr21:36855369:M	AAAAATAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:24,2:27:0,43,255	0/1:18,10:28:101,0,248
+chr21	36855537	chr21:36855537:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:14:255,42,0	0/0:2,0:2:0,6,54	1/1:1,16:17:255,24,0
+chr21	36862946	chr21:36862946:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:29:0,83,255	0/0:26,0:29:0,81,255	0/1:13,8:24:154,0,255
+chr21	36866207	chr21:36866207:M	GGGAAGGGAATGGTAAGGGAAGGG	<5>	.	.	Motif=GGGAA	GT:AD:DP:PL	1/1:0,31:31:255,86,0	1/1:0,28:28:255,77,0	1/1:0,48:48:255,133,0
+chr21	36866841	chr21:36866841:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,19:33:248,0,149	0/0:26,1:31:0,60,255	0/1:22,17:43:176,0,255
+chr21	36869098	chr21:36869098:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:9,9:19:127,0,118	0/0:8,0:8:0,24,145	1/1:0,15:15:255,44,0
+chr21	36874405	chr21:36874405:M	AAAATAAAATAAAATAAAATAAAATAAAATAAATAAATTAAAA	<8.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:14,1:15:0,23,255	0/0:18,0:18:0,54,255	1/1:0,8:8:169,24,0
+chr21	36879916	chr21:36879916:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:23:111,0,167	0/0:17,2:24:0,34,255	0/1:17,14:32:172,0,215
+chr21	36880955	chr21:36880955:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>,<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:6,14,0:20:215,0,58,255,100,255	0/2:11,0,10:21:121,180,255,0,170,140	0/1:11,18,0:29:255,0,123,255,178,255
+chr21	36886433	chr21:36886433:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	0/1:1,2:4:25,0,7	0/1:1,0:2:6,0,11
+chr21	36887130	chr21:36887130:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:19:135,0,90	1/1:0,18:20:255,58,0	0/1:6,13:22:174,0,63
+chr21	36888433	chr21:36888433:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,6,0:8:51,0,0,57,21,85	0/1:2,4,0:6:31,0,7,37,24,77	1/2:0,1,3:4:70,36,25,10,0,1
+chr21	36888446	chr21:36888446:M	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,4:9:124,0,8	1/1:0,1:3:44,7,0	0/0:0,0:1:0,1,3
+chr21	36888495	chr21:36888495:M	TATTTATTTATTTATTT	<6.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:2,6:8:141,0,32	.	0/1:3,0:5:9,0,70
+chr21	36894847	chr21:36894847:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,20:49:229,0,255	0/0:29,0:31:0,90,255	1/1:3,34:39:255,59,0
+chr21	36906050	chr21:36906050:M	AAAAAAAAAAAAAAACAAAACAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:15:0,42,255	0/0:16,0:19:0,51,255	0/1:2,5:8:117,0,28
+chr21	36906678	chr21:36906678:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:4,13,10:28:255,116,215,177,0,255	0/2:7,2,11:20:130,152,255,0,67,82	1/1:1,23,0:24:255,53,0,255,69,255
+chr21	36908392	chr21:36908392:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:33:105,0,255	0/0:29,0:31:0,90,255	1/1:1,21:24:255,52,0
+chr21	36910547	chr21:36910547:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:27:252,0,255	0/0:31,0:31:0,93,255	1/1:0,25:29:255,78,0
+chr21	36911749	chr21:36911749:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:53,6,0	0/1:0,0:1:0,0,0	1/1:0,4:4:111,12,0
+chr21	36912072	chr21:36912072:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:12:36,0,107	0/0:14,2:17:0,14,205	0/1:13,6:20:46,0,179
+chr21	36917951	chr21:36917951:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:33:203,0,183	0/0:30,1:34:0,82,255	1/1:2,26:30:255,51,0
+chr21	36926742	chr21:36926742:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:71,0,0	0/1:2,8:11:115,0,2	0/1:6,1:9:2,0,89
+chr21	36931284	chr21:36931284:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:8:241,24,0	1/1:0,5:6:150,15,0	1/1:0,1:2:45,6,0
+chr21	36933552	chr21:36933552:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,6,2:10:169,13,16,97,0,90	2/2:0,0,4:4:68,68,68,12,12,0	1/2:0,6,6:13:246,88,67,111,0,77
+chr21	36942399	chr21:36942399:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:69,9,0	1/1:0,11:12:255,36,0	1/1:0,6:8:193,23,0
+chr21	36943818	chr21:36943818:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:139,0,109	1/1:2,15:21:255,25,0	0/1:10,12:23:154,0,117
+chr21	36948292	chr21:36948292:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:9:83,0,20	0/1:4,11:17:161,0,20	0/1:8,5:16:53,0,114
+chr21	36950180	chr21:36950180:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,29:54:255,0,255	1/1:0,45:45:255,132,0	0/1:21,20:41:252,0,255
+chr21	36950638	chr21:36950638:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:26:211,0,133	1/1:0,26:26:255,76,0	0/1:18,21:39:255,0,221
+chr21	36954744	chr21:36954744:M	AAAAAAACAAAACAAAACAAAACAAAACAAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,10:32:98,0,255	1/1:0,26:26:255,77,0	0/1:13,17:30:230,0,156
+chr21	36957053	chr21:36957053:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:15:160,0,70	1/1:0,20:25:255,63,0	0/1:4,6:13:138,0,73
+chr21	36958254	chr21:36958254:M	AAAGAAAGAAAGAAAGAAAGAAA	<6.8>,<8.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/2:13,0,8:26:255,255,255,0,210,255	1/2:0,6,8:30:255,255,255,67,0,162	0/1:13,8,0:24:74,0,167,144,236,255
+chr21	36960132	chr21:36960132:M	CCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,5:5:141,15,0	1/1:0,13:13:255,39,0	1/1:0,7:7:192,21,0
+chr21	36965732	chr21:36965732:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/1:17,10:27:99,0,223	0/0:29,1:32:0,73,255
+chr21	36965919	chr21:36965919:M	TGTTTTTTTTGTTTTGTTTT	<5>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:16,8:24:83,0,237	1/1:0,23:23:255,68,0	0/1:11,20:31:255,0,115
+chr21	36969582	chr21:36969582:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,22:31:255,0,82	1/1:0,22:25:255,71,0	0/1:11,21:37:255,0,210
+chr21	36970994	chr21:36970994:M	AAAAAAAAAAAAAGAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,14:32:255,0,255	1/1:0,18:19:255,54,0	0/1:11,8:20:153,0,240
+chr21	36973055	chr21:36973055:M	AAAAAAAAACAAAACA	<3.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:19,23:42:255,0,255	1/1:0,27:28:255,84,0	0/1:24,14:41:255,0,255
+chr21	36983837	chr21:36983837:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:84,15,0	1/1:0,2:2:32,6,0	0/1:1,2:4:32,0,5
+chr21	36985770	chr21:36985770:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5:22:50,0,177	0/0:31,3:37:0,56,255	0/1:23,9:35:78,0,255
+chr21	36989010	chr21:36989010:M	TTTTAATTTTATTTTATTTTATTTATTTATTTATTTATTTTTTTT	<8.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:9,7:16:109,0,155	0/1:5,10:15:179,0,68	0/1:13,13:27:214,0,212
+chr21	36992242	chr21:36992242:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,19:29:255,0,102	0/1:18,19:37:229,0,211	0/1:15,21:36:255,0,170
+chr21	36993289	chr21:36993289:M	AAACAAACAAACAAACAAA	<5.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:22,19:41:247,0,255	0/1:12,11:23:132,0,151	0/1:23,21:44:255,0,255
+chr21	36995250	chr21:36995250:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:43:255,126,0	1/1:0,49:49:255,147,0	1/1:0,49:49:255,147,0
+chr21	36996415	chr21:36996415:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,18:27:253,0,66	0/1:12,13:25:150,0,133	0/1:12,16:28:200,0,130
+chr21	36996511	chr21:36996511:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:19:189,0,220	0/1:10,8:18:166,0,221	0/1:21,13:34:255,0,255
+chr21	36998164	chr21:36998164:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:34:212,0,202	0/1:7,11:18:138,0,69	0/1:11,23:35:255,0,104
+chr21	37002773	chr21:37002773:M	TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:9:46,0,64	0/1:5,4:11:48,0,65	0/1:4,7:12:92,0,38
+chr21	37004922	chr21:37004922:M	TTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:6:30,0,69	0/1:5,9:18:237,0,103	0/1:2,3:7:79,0,43
+chr21	37005243	chr21:37005243:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:2,19:24:255,35,0	0/1:3,10:13:137,0,15
+chr21	37008757	chr21:37008757:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:81,3,0	1/1:0,7:9:140,26,0	1/1:0,10:10:173,29,0
+chr21	37009235	chr21:37009235:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,28:55:255,0,255	0/1:23,22:46:255,0,255	0/1:17,27:44:255,0,183
+chr21	37010993	chr21:37010993:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,13:30:255,225,255,255,0,255	1/2:0,15,11:26:255,192,234,255,0,255	1/2:1,13,16:32:255,255,255,229,0,255
+chr21	37012213	chr21:37012213:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATT	<12.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/2:5,0,10:15:146,187,255,0,81,51	0/2:4,0,6:10:78,106,213,0,60,42	1/2:0,13,2:15:233,36,13,237,0,255
+chr21	37012864	chr21:37012864:M	TTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,8:10:204,0,12	1/1:0,4:5:127,15,0	1/1:0,7:9:201,15,0
+chr21	37015876	chr21:37015876:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:14:0,30,207	0/1:14,7:22:55,0,183	0/1:8,8:17:90,0,100
+chr21	37017153	chr21:37017153:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,6:15:243,95,73,87,0,90	1/2:2,4,3:10:101,25,33,23,0,62	1/2:0,5,3:9:135,44,28,65,0,64
+chr21	37019265	chr21:37019265:M	AAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:24:255,0,67	1/1:0,10:16:255,31,0	1/1:0,17:23:255,28,0
+chr21	37022163	chr21:37022163:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:62,0,70	0/1:5,0:7:3,0,63	0/1:5,2:7:14,0,65
+chr21	37026043	chr21:37026043:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,15:25:220,0,97	0/1:11,17:29:227,0,112	0/1:16,20:36:255,0,190
+chr21	37026491	chr21:37026491:M	GAGAGAGAGAGAGA	<6>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,43:44:255,129,0	1/1:0,58:58:255,171,0
+chr21	37039780	chr21:37039780:M	CCTTCCCTTTCCCTTCCCTCTCCTTTCCTCTCCTTTCCTCTCTTTTCCTCTCCTTTCCTTTCCTTTCCT	<5.4>	.	.	Motif=CCTTT	GT:AD:DP:PL	0/1:2,2:4:60,0,37	0/1:1,3:4:105,0,12	0/1:1,2:3:57,0,16
+chr21	37042969	chr21:37042969:M	TATTTATTTATTTATTTATTTATTTATTT	<5.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	0/1:10,11:21:239,0,214	1/1:0,34:34:255,102,0
+chr21	37043739	chr21:37043739:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,0,1:11:0,30,255,15,187,157	0/2:9,0,5:15:42,69,255,0,148,109	0/1:4,5,2:12:124,0,84,64,39,101
+chr21	37044386	chr21:37044386:M	CCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	1/2:0,4,3:7:137,53,34,61,0,52	0/2:3,0,2:5:41,33,71,0,51,72	1/2:0,7,4:11:208,70,39,104,0,92
+chr21	37045161	chr21:37045161:M	TTTTTTTTTGTTGTTTGTTTTTG	<3.3>	.	.	Motif=TTTTGT	GT:AD:DP:PL	1/1:0,47:47:255,141,0	0/1:17,19:36:255,0,255	1/1:0,34:34:255,102,0
+chr21	37045634	chr21:37045634:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,46:51:255,93,0	0/1:18,23:42:255,0,206	1/1:0,33:33:255,97,0
+chr21	37051655	chr21:37051655:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:7,5:12:50,0,84	1/1:1,11:12:174,18,0
+chr21	37052860	chr21:37052860:M	TATATATATAT	<4.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,6:6:107,18,0	0/0:29,1:30:0,71,255	1/1:0,3:3:53,9,0
+chr21	37052870	chr21:37052870:M	TGTGTGTGTATGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:45:255,133,0	0/1:25,15:44:255,0,255	1/1:0,27:31:255,92,0
+chr21	37054515	chr21:37054515:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:28:255,81,0	0/1:11,7:19:75,0,134	0/1:7,11:19:140,0,78
+chr21	37056958	chr21:37056958:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:25:255,69,0	0/1:11,10:24:226,0,230	1/1:0,27:30:255,89,0
+chr21	37061892	chr21:37061892:M	AAAAAAAAAAAAAATAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,21,10:32:255,172,255,255,0,255	1/1:0,28,0:29:255,85,0,255,87,255	2/2:1,0,21:22:255,255,255,47,63,0
+chr21	37066972	chr21:37066972:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,28,26:57:255,255,255,255,0,255	2/2:0,0,19:22:255,255,255,63,63,0	1/1:0,32,0:32:255,96,0,255,96,255
+chr21	37068011	chr21:37068011:M	TTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:1,31:33:255,79,0	1/1:0,40:41:255,120,0
+chr21	37068208	chr21:37068208:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,21:30:255,0,71	1/1:1,32:35:255,84,0	0/0:52,0:52:0,153,255
+chr21	37073316	chr21:37073316:M	GCTGCTGCTGCTGCTGC	<7.7>	.	.	Motif=GCT	GT:AD:DP:PL	1/1:0,21:25:255,63,0	1/1:1,31:35:255,71,0	1/1:0,38:40:255,114,0
+chr21	37075167	chr21:37075167:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	0/1:4,10:14:133,0,29	1/1:1,18:19:255,38,0
+chr21	37076695	chr21:37076695:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:11:255,33,0	1/1:0,9:14:255,36,0	0/0:0,0:1:0,0,0
+chr21	37080369	chr21:37080369:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,31:52:255,0,255	1/1:0,38:38:255,114,0	0/0:46,1:54:0,113,255
+chr21	37081866	chr21:37081866:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:27:255,0,250	0/0:28,0:35:0,93,255	1/1:0,14:15:255,42,0
+chr21	37084992	chr21:37084992:M	CAAACAAACAAACAAACAAAC	<7.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:9,14:24:255,0,175	1/1:0,28:29:255,84,0	0/0:35,0:35:0,105,255
+chr21	37089985	chr21:37089985:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:40:216,0,255	1/1:1,22:24:255,52,0	0/0:35,1:37:0,90,255
+chr21	37090468	chr21:37090468:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,26:49:255,0,255	0/0:26,2:31:0,35,255	1/1:0,44:46:255,135,0
+chr21	37091565	chr21:37091565:M	TTTATTATTTATTTATTTATTTATTTATTTATTT	<7.5>,<10.5>,<11.5>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,18,10,0:32:255,255,237,255,0,255,255,207,255,255	2/3:0,0,3,4:8:203,205,207,73,73,50,62,63,0,42	1/1:0,29,0,0:31:255,89,0,255,90,255,255,90,255,255
+chr21	37093380	chr21:37093380:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:10:73,0,39	0/0:4,0:5:0,14,77	0/1:1,4:5:53,0,2
+chr21	37095138	chr21:37095138:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,5:24:84,0,255	1/1:0,14:17:255,47,0	0/0:28,0:29:0,87,255
+chr21	37101352	chr21:37101352:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,13,0:28:255,0,255,255,255,255	0/1:12,16,2:32:255,0,255,255,171,255	0/2:8,0,16:24:216,255,255,0,142,73
+chr21	37101919	chr21:37101919:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,12:36:253,0,255	1/1:0,2:2:60,6,0	0/0:37,0:37:0,111,255
+chr21	37104589	chr21:37104589:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:5:111,17,14,99,0,98	1/1:0,3,0:3:81,9,0,82,9,84	0/2:1,0,3:4:38,49,99,0,17,5
+chr21	37107077	chr21:37107077:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,17:39:201,0,255	1/1:0,31:34:255,96,0	0/0:23,2:26:0,40,255
+chr21	37115175	chr21:37115175:M	ATAATAATAATAATAATAATAATAATAA	<10.3>,<11.3>,<12.3>	.	.	Motif=ATA	GT:AD:DP:PL	1/3:0,17,0,8:25:255,218,165,255,150,255,255,0,255,255	3/3:0,0,1,11:12:255,255,255,215,214,181,36,33,17,0	1/2:0,12,11,0:23:255,204,138,190,0,157,255,174,222,255
+chr21	37118116	chr21:37118116:M	TTTTTCTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,49:50:255,147,0	1/1:0,37:37:255,109,0	1/1:0,55:55:255,162,0
+chr21	37122405	chr21:37122405:M	ATATATATATATATAATATATATATATATATATTATATATATATATATA	<7.5>,<13>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,3,17:20:255,255,255,76,0,25	2/2:0,0,10:10:255,255,255,30,30,0	1/1:0,5,0:5:140,15,0,140,15,140
+chr21	37122954	chr21:37122954:M	TGTGTGTGTGTGTGTG	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,38:39:255,115,0	1/1:0,37:37:255,111,0
+chr21	37126042	chr21:37126042:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:163,0,163	0/0:32,2:35:0,67,255	1/1:3,28:33:255,42,0
+chr21	37132327	chr21:37132327:M	TTTTTTTTCTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,2,12:24:183,153,255,0,147,117	0/0:33,0,3:36:0,99,255,53,255,255	1/2:0,3,8:11:199,123,114,54,0,22
+chr21	37134449	chr21:37134449:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:194,0,183	0/0:37,0:39:0,114,255	1/1:0,38:38:255,112,0
+chr21	37150054	chr21:37150054:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:37:255,0,174	0/1:19,20:43:255,0,220	1/1:2,35:39:255,78,0
+chr21	37152380	chr21:37152380:M	TTTTTTTTTTTTGTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,6:12:74,0,74	0/0:4,0:5:0,14,80	1/1:0,19:22:255,64,0
+chr21	37156043	chr21:37156043:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,13:30:155,0,231	0/0:41,0:43:0,126,255	1/1:2,38:40:255,81,0
+chr21	37156207	chr21:37156207:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,19:33:255,0,249	0/0:38,0:40:0,119,255	1/1:0,46:46:255,138,0
+chr21	37161104	chr21:37161104:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,24:51:255,0,255	0/0:42,0:44:0,128,255	1/1:1,32:35:255,84,0
+chr21	37164341	chr21:37164341:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:20:98,0,144	0/0:26,2:29:0,50,255	1/1:3,25:32:255,38,0
+chr21	37175100	chr21:37175100:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,9:22:101,0,175	0/0:23,0:24:0,70,255	1/1:2,18:21:255,25,0
+chr21	37175264	chr21:37175264:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,4:6:108,76,92,0,27,12	0/0:6,0,0:6:0,18,177,18,177,177	1/2:0,3,8:11:255,133,102,51,0,18
+chr21	37184630	chr21:37184630:M	TTTTTTTTTTTTTTTTTTT	<18>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,2:6:38,49,108,0,69,101	0/1:11,6,0:18:59,0,132,109,184,255	2/2:0,0,4:4:111,111,111,12,12,0
+chr21	37190121	chr21:37190121:M	TTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	.	.	1/1:0,3:5:102,12,0
+chr21	37192492	chr21:37192492:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,4:16:255,102,65,255,0,255	0/1:11,8,0:20:176,0,255,206,255,255	2/2:0,0,11:11:255,255,255,33,33,0
+chr21	37193366	chr21:37193366:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,21:45:255,255,255,255,0,255	0/1:26,18,0:47:185,0,255,255,255,255	2/2:0,1,41:43:255,255,255,126,108,0
+chr21	37196227	chr21:37196227:M	TTTTTTCTTTCTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:14:104,0,69	0/1:10,5:15:43,0,128	1/1:2,18:20:255,23,0
+chr21	37197755	chr21:37197755:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,11:39:219,0,255	0/0:34,0:36:0,105,255	1/1:1,19:25:255,32,0
+chr21	37198851	chr21:37198851:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,29:54:255,0,255	0/0:38,2:40:0,82,255	1/1:0,49:49:255,145,0
+chr21	37204423	chr21:37204423:M	TGTGTGTGTGTGTGTGTGTGTG	<10>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,28:29:255,85,0	1/1:0,29:30:255,88,0
+chr21	37207073	chr21:37207073:M	AAAAAACAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,39:40:255,99,0	1/1:0,29:29:255,85,0	1/1:1,30:34:255,81,0
+chr21	37212896	chr21:37212896:M	AAAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAG	<7.2>,<13.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:10,3,2:16:46,0,255,57,83,130	0/0:27,1,0:31:0,16,255,71,255,255	1/2:0,4,8:12:154,83,191,92,0,71
+chr21	37212994	chr21:37212994:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:12:21,0,82	0/1:5,2:8:12,0,61	0/0:10,2:15:0,6,149
+chr21	37214385	chr21:37214385:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,1:6:17,23,117,0,85,75	0/0:5,0,0:6:0,18,164,15,150,144	1/2:0,5,3:8:213,52,29,87,0,64
+chr21	37215269	chr21:37215269:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5,0:12:129,0,126,95,132,212	0/0:2,0,0:5:0,14,95,9,76,69	1/2:0,5,3:8:217,52,29,87,0,64
+chr21	37216209	chr21:37216209:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:20:71,0,163	0/0:15,0:16:0,46,255	1/1:2,25:30:255,51,0
+chr21	37229022	chr21:37229022:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,22:39:255,0,207	0/1:14,22:36:255,0,144	0/0:48,1:49:0,126,255
+chr21	37235011	chr21:37235011:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/1:13,15:28:184,0,149	0/0:29,0:31:0,82,255
+chr21	37235852	chr21:37235852:M	TATATATATATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,11:16:255,48,0	1/1:0,9:12:255,24,0	1/1:0,9:13:255,39,0
+chr21	37235880	chr21:37235880:M	TTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:26:183,0,255	1/1:0,10:13:255,37,0	0/1:17,13:32:255,0,255
+chr21	37239604	chr21:37239604:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:144,0,180	0/1:10,9:19:101,0,118	0/1:13,11:26:133,0,160
+chr21	37248335	chr21:37248335:M	GGGGGTGGGGGGAGGGGGGG	<13>	.	.	Motif=G	GT:AD:DP:PL	0/1:7,31:38:255,0,68	0/0:7,0:7:0,21,193	1/1:0,48:48:255,144,0
+chr21	37250900	chr21:37250900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,6:15:66,0,112	0/0:11,0:12:0,35,202	0/1:1,6:9:83,0,5
+chr21	37255852	chr21:37255852:M	TTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:107,14,0	0/1:5,6:15:151,0,116	.
+chr21	37261654	chr21:37261654:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:40:255,0,219	0/1:22,14:37:139,0,255	0/0:42,1:43:0,109,255
+chr21	37274998	chr21:37274998:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.5>,<12.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:7,0,6:14:79,106,255,0,104,98	0/2:7,0,3:10:26,54,190,0,107,98	0/1:8,8,0:16:106,0,104,152,128,255
+chr21	37275958	chr21:37275958:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:27:255,80,0	0/1:20,18:38:209,0,244	1/1:0,38:38:255,112,0
+chr21	37277526	chr21:37277526:M	AAAACAAAAACAAAAACAAAAAACAAACAAACAAAAA	<7>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,29:29:255,87,0	0/1:12,12:24:251,0,251	1/1:0,29:29:255,87,0
+chr21	37278234	chr21:37278234:M	CCCCCCCCCGCCCCCCC	<18>,<20>	.	.	Motif=C	GT:AD:DP:PL	2/2:0,0,7:7:210,206,202,21,21,0	1/2:0,7,3:12:187,89,66,114,0,164	2/2:0,0,5:6:151,147,144,15,15,0
+chr21	37284569	chr21:37284569:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<10.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:0,5:12:120,0,29	0/0:12,0:17:0,19,255	0/1:0,14:28:255,0,0
+chr21	37284597	chr21:37284597:M	TTTTTTTTTTTTTTTTTTTT	<21>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,1:8:56,21,20,36,0,111	0/0:1,0,0:2:0,5,23,6,29,56	1/2:1,7,3:12:159,98,87,71,0,184
+chr21	37293474	chr21:37293474:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:5:18,0,35	1/1:0,5:8:96,9,0	0/1:5,2:7:15,0,68
+chr21	37296540	chr21:37296540:M	TTTTTTTTTTTTTTT	<14>,<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,15,3,9:27:255,248,235,255,110,255,255,0,255,255	1/2:4,14,10,1:29:255,123,238,184,0,255,255,167,255,255	2/3:0,0,3,15:18:255,255,255,255,255,219,46,55,0,1
+chr21	37303361	chr21:37303361:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,1:37:0,90,255	0/1:15,10:26:100,0,188	0/0:33,0:34:0,99,255
+chr21	37308460	chr21:37308460:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:6:27,0,6	0/0:3,0:3:0,8,32	0/0:3,0:3:0,8,32
+chr21	37309286	chr21:37309286:M	TATTTATTTATTTATTTATTTATTTATTTATTATTT	<10>,<11>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,9,0:27:91,0,255,145,255,255	0/2:5,0,8:14:185,140,197,0,90,105	1/1:0,19,0:22:255,46,0,255,61,255
+chr21	37318424	chr21:37318424:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:5:0,15,85	0/0:5,1:6:0,1,65	0/1:1,5:10:77,0,11
+chr21	37318980	chr21:37318980:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,3,11:27:124,145,255,0,148,191	0/1:14,16,0:30:191,0,156,255,204,255	2/2:1,0,22:25:255,255,255,55,71,0
+chr21	37321432	chr21:37321432:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	<6.5>,<8.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:5,16,0:23:255,0,91,255,137,255	0/2:2,0,8:12:209,213,255,0,54,28	1/1:0,21,0:24:255,66,0,255,66,255
+chr21	37321983	chr21:37321983:M	GTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:5,19,12,0:36:255,143,255,255,0,255,255,236,255,255	0/1:9,17,0,0:26:224,0,81,255,132,255,255,157,255,255	2/3:2,0,13,13:28:255,255,255,199,231,154,163,236,0,185
+chr21	37325022	chr21:37325022:M	TCTCTCTCTCTCTCTCTCTCT	<12.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,12:25:201,0,202	0/1:1,22:28:255,0,2	0/0:31,0:34:0,95,255
+chr21	37327340	chr21:37327340:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,6:14:199,71,69,57,0,90	1/2:0,11,7:19:255,111,69,151,0,140	1/2:3,10,5:19:227,45,47,97,0,154
+chr21	37330840	chr21:37330840:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:31:164,0,127	0/1:18,12:32:98,0,188	0/1:25,14:41:101,0,255
+chr21	37331534	chr21:37331534:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,22:47:255,0,255	0/1:15,16:32:192,0,175	0/1:24,17:42:199,0,255
+chr21	37332171	chr21:37332171:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:11:217,52,59,173,0,164	1/2:0,1,1:5:74,16,14,58,0,54	1/2:0,7,2:14:255,43,31,231,0,222
+chr21	37340818	chr21:37340818:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:10,3:14:11,0,137	0/1:7,6:14:74,0,81
+chr21	37341121	chr21:37341121:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,10:33:90,0,246	0/0:24,2:28:0,49,255	0/1:9,8:17:80,0,96
+chr21	37341131	chr21:37341131:M	AAAGAAAGAAAGAAAGAAAG	<4.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:22,6:36:0,5,40	0/0:25,0:26:0,37,96	1/1:0,5:13:42,17,0
+chr21	37345516	chr21:37345516:M	AAATAAATAAATAAATAAATAAAATAAA	<6>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:17,20:37:255,0,219	0/0:40,0:40:0,118,255	1/1:0,41:41:255,121,0
+chr21	37346955	chr21:37346955:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:35:255,0,149	0/0:28,1:31:0,70,255	1/1:2,40:46:255,88,0
+chr21	37352837	chr21:37352837:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:15:212,25,0	0/1:4,5:11:61,0,45	1/1:0,7:7:120,20,0
+chr21	37360872	chr21:37360872:M	CTCTCTCTCTCTCTCTCTCT	<11>	.	.	Motif=CT	GT:AD:DP:PL	0/1:19,22:41:255,0,241	0/0:30,0:30:0,88,255	1/1:0,35:36:255,103,0
+chr21	37362853	chr21:37362853:M	AAAAAAAAAAAAAAGGAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,6:18:63,0,141	0/1:9,5:17:56,0,105	0/0:27,1:28:0,65,255
+chr21	37372278	chr21:37372278:M	AAAAAACAAAACAAAACAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:21:255,62,0	0/1:10,13:23:163,0,110	1/1:0,20:20:255,59,0
+chr21	37372449	chr21:37372449:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:19:151,0,71	0/0:22,2:25:0,29,255	1/1:2,19:21:255,27,0
+chr21	37375520	chr21:37375520:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:48,9,0	1/1:0,4:5:80,14,0	1/1:0,0:1:1,1,0
+chr21	37383833	chr21:37383833:M	GTGTATGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,10:26:194,0,255	0/0:35,0:37:0,110,255	1/1:0,27:27:255,81,0
+chr21	37388101	chr21:37388101:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2,0:5:74,1,0,56,5,59	1/2:1,10,4:16:255,50,90,254,0,250	0/1:2,1,0:4:33,0,52,34,35,61
+chr21	37388655	chr21:37388655:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,21:35:255,0,151	0/1:16,18:34:221,0,185	0/0:29,2:31:0,55,255
+chr21	37389039	chr21:37389039:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,3:20:0,10,226	0/0:40,1:41:0,103,255	1/1:0,4:4:64,12,0
+chr21	37389914	chr21:37389914:M	TTTTGTTTTTTGTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,11:30:110,0,235	0/1:9,8:18:93,0,102	0/0:24,0:25:0,73,255
+chr21	37394227	chr21:37394227:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,20:37:255,0,207	0/0:38,2:41:0,85,255	1/1:1,40:41:255,103,0
+chr21	37396521	chr21:37396521:M	TTTTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,35:36:255,88,0	0/1:22,14:38:149,0,255	1/1:2,43:45:255,96,0
+chr21	37398077	chr21:37398077:M	ATATATATATATATTTATATTTATATATTTTTGTATATTTTATATTTATATATGTGTATATATATATAT	<33>,<34>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,6,2:17:75,0,120,54,37,71	.	0/2:10,0,6:17:5,48,236,0,77,32
+chr21	37398344	chr21:37398344:M	AAAAAAAAAAAAATAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,1:50:0,129,255	0/1:11,14:25:172,0,120	0/0:23,0:23:0,68,255
+chr21	37398905	chr21:37398905:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,8:20:173,0,211	0/1:13,11:26:226,0,255	0/0:25,0:31:0,71,255
+chr21	37401483	chr21:37401483:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,10:24:111,0,183	0/1:10,8:18:85,0,119	0/0:20,0:21:0,61,255
+chr21	37403635	chr21:37403635:M	AAAAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,18:27:255,219,146,84,0,5	0/1:12,5,0:22:81,0,255,23,255,255	2/2:0,1,29:31:255,255,255,82,71,0
+chr21	37403664	chr21:37403664:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,12:25:255,142,68,149,0,77	0/1:4,7,0:13:172,0,90,86,109,174	2/2:0,4,25:29:255,255,235,87,33,0
+chr21	37408006	chr21:37408006:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,19:43:230,0,255	0/0:45,0:45:0,132,255	1/1:1,42:43:255,109,0
+chr21	37417494	chr21:37417494:M	TTTTTTATTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:10:228,29,0	1/1:1,8:9:181,3,0	.
+chr21	37426755	chr21:37426755:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:230,38,0	0/1:6,6:12:69,0,69	1/1:1,13:15:223,26,0
+chr21	37433045	chr21:37433045:M	ATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,17:35:233,0,189	0/0:19,1:20:0,41,255	1/1:3,21:25:255,16,0
+chr21	37440131	chr21:37440131:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,0,0	.	0/1:1,3:5:85,0,15
+chr21	37441963	chr21:37441963:M	TTTTTTTTTTTTTT	<12>,<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,21,4,1:49:255,0,255,255,255,255,255,255,255,255	2/3:0,1,15,8:26:255,255,255,148,212,177,255,244,0,255	0/0:38,0,0,1:39:0,117,255,115,255,255,97,255,255,255
+chr21	37446582	chr21:37446582:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:27:255,42,0	0/1:21,17:42:196,0,255	1/1:2,27:30:255,52,0
+chr21	37451346	chr21:37451346:M	CTCCGTCCCTCCATCCCTCCCTCCCTCCATCCCTCCC	<11.5>	.	.	Motif=CTCC	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/1:10,5:15:79,0,207	0/0:23,0:23:0,69,255
+chr21	37452758	chr21:37452758:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	0/1:2,4:7:91,0,38	1/1:1,15:21:255,28,0
+chr21	37454086	chr21:37454086:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,0,0	1/1:0,6:6:163,18,0	.
+chr21	37455020	chr21:37455020:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,6:12:194,88,75,43,0,51	0/0:5,1,0:8:0,6,90,20,107,166	0/2:3,3,6:12:145,59,78,0,7,58
+chr21	37457014	chr21:37457014:M	TTACTTACTTACTTACTTACTTACTTA	<1.8>,<8.8>	.	.	Motif=TTAC	GT:AD:DP:PL	0/2:6,0,6:19:95,124,255,0,144,122	0/1:4,8,0:14:172,0,95,190,106,255	0/2:2,0,17:26:255,255,255,0,72,5
+chr21	37457038	chr21:37457038:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<8.8>,<9.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:16,0,8:24:147,128,255,0,255,255	1/2:0,6,7:13:255,110,73,95,0,57	0/0:17,0,0:17:0,51,255,51,255,255
+chr21	37458269	chr21:37458269:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<22.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,16,0,0:18:255,54,0,255,54,255,255,54,255,255	1/3:0,13,0,8:22:255,222,180,255,132,255,255,0,255,255	1/2:0,14,8,0:25:255,229,183,255,0,255,255,145,255,255
+chr21	37463204	chr21:37463204:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<14>,<20>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,19,22,0:42:255,255,255,255,0,255,255,255,255,255	2/3:0,0,12,9:23:255,255,255,255,255,255,207,255,0,255	1/1:0,24,0,0:24:255,72,0,255,72,255,255,72,255,255
+chr21	37467102	chr21:37467102:M	AAAAGAAAAAAAAAAAAAAACAAAACAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:26:255,58,0	1/1:0,17:17:255,50,0	1/1:0,23:24:255,70,0
+chr21	37476819	chr21:37476819:M	CCCCCCCCCCCC	<13>,<14>	.	.	Motif=C	GT:AD:DP:PL	0/0:14,1,0:15:0,26,239,42,255,255	0/2:4,4,18:26:255,250,248,0,9,45	0/1:7,4,0:13:34,0,108,60,138,246
+chr21	37484330	chr21:37484330:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14:15:255,44,0	0/1:10,7:18:68,0,128	1/1:1,12:13:195,20,0
+chr21	37489634	chr21:37489634:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:36:255,67,0	0/1:15,11:27:231,0,255	1/1:1,30:40:255,58,0
+chr21	37494946	chr21:37494946:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,27:29:255,48,0	1/1:0,24:25:255,73,0	1/1:1,38:40:255,99,0
+chr21	37495153	chr21:37495153:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<21>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,26,0:27:255,81,0,255,81,255	1/2:0,17,8:27:255,225,170,255,0,255	1/1:0,19,0:19:255,57,0,255,57,255
+chr21	37512925	chr21:37512925:M	TTTTTTTTTTTTCTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,13:29:255,181,158,252,0,188	0/1:9,6,0:16:136,0,206,110,151,222	2/2:1,0,22:23:255,255,255,50,67,0
+chr21	37526664	chr21:37526664:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,22:25:255,19,0	0/1:12,3:15:8,0,163	1/1:1,16:19:255,37,0
+chr21	37529451	chr21:37529451:M	TGGATGGATGGATGGATGGA	<3>,<4>	.	.	Motif=TGGA	GT:AD:DP:PL	1/1:0,11,1:15:255,41,0,191,28,156	0/0:12,0,0:12:0,36,255,33,181,149	1/2:0,7,5:14:210,51,24,104,0,69
+chr21	37537906	chr21:37537906:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<13.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10,0:11:255,32,0,225,32,199	1/2:0,8,11:19:255,166,142,142,0,88	1/1:0,12,0:13:255,39,0,255,38,233
+chr21	37545384	chr21:37545384:M	TAAATAAATAAATAAAGTAATAAATA	<5.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:20,16:36:255,0,255	0/1:16,17:33:255,0,255	0/0:35,0:35:0,105,255
+chr21	37545510	chr21:37545510:M	TGTGTGTGTGTGTG	<6>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,107,0	0/1:14,27:41:255,0,134	1/1:0,42:42:255,124,0
+chr21	37563876	chr21:37563876:M	CGTCCCCGTCCGCGTCCGC	<4.2>	.	.	Motif=CGTCCG	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:34,0:34:0,102,255	0/1:18,14:32:255,0,255
+chr21	37565447	chr21:37565447:M	CTTTCTTTCTTTCCTTTCTTCCTTCCTTTTTTTTTTCTTT	<6.5>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:19,7:30:136,0,255	0/1:11,5:18:83,0,255	0/1:16,3:29:71,0,255
+chr21	37565473	chr21:37565473:M	TTTTTTTTTTCTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:10:0,29,164	0/1:5,2:7:12,0,61	0/1:9,3:12:15,0,115
+chr21	37567973	chr21:37567973:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:135,0,154	0/0:14,0:15:0,44,254	0/1:10,9:19:106,0,124
+chr21	37572299	chr21:37572299:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:47,0,47	0/0:6,1:7:0,4,84	0/1:5,1:6:0,0,69
+chr21	37579027	chr21:37579027:M	TTTTTGTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,17:26:238,0,88	0/0:14,1:15:0,27,226	0/1:10,9:21:101,0,134
+chr21	37581954	chr21:37581954:M	AAAAAAAAACAAAAAACAAAAACAAAAA	<4.3>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,44:44:255,132,0	1/1:0,38:38:255,114,0
+chr21	37585793	chr21:37585793:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/0:35,2:39:0,78,255	0/1:28,31:59:255,0,255
+chr21	37597085	chr21:37597085:M	TTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:32:0,76,255	0/0:33,1:38:0,73,255	0/1:13,5:20:122,0,255
+chr21	37607464	chr21:37607464:M	ATATATATATATATATATAT	<15.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,6:10:255,70,40,47,0,18	0/2:7,0,2:11:44,31,223,0,199,191	0/1:10,2,0:15:50,0,244,44,255,255
+chr21	37612725	chr21:37612725:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:22:255,65,0	0/1:2,8:16:225,0,20	0/1:6,14:26:255,0,82
+chr21	37614360	chr21:37614360:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:27,0:27:0,79,255	0/1:12,9:22:103,0,135	0/1:16,10:26:97,0,197
+chr21	37614751	chr21:37614751:M	TGTGTGTGTATGCATGTGTCTGTGTGTATGTGTGTGTGTATGCATGTGTCTGTGTGTGTATTTGTGTGTATGTGTGTGTGT	<34>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:9:91,0,84	0/0:3,0:4:0,9,79	0/0:6,0:6:0,18,158
+chr21	37615245	chr21:37615245:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	.	1/1:0,7:7:195,21,0
+chr21	37616591	chr21:37616591:M	ATATATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,6:12:130,11,0	1/1:0,8:11:164,30,0	1/1:0,0:3:0,0,0
+chr21	37617170	chr21:37617170:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	<10.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,3:4:100,9,0	1/1:0,4:5:124,12,0	0/0:0,0:4:0,1,2
+chr21	37626131	chr21:37626131:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,13,13:29:255,193,159,160,0,181	0/2:22,2,13:38:255,194,255,0,255,255	0/1:19,18,0:39:212,0,253,255,255,255
+chr21	37630135	chr21:37630135:M	TGTGTGTGTGTGTGTGTGTGTGTGGTGT	<18>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,5:19:255,131,90,255,0,255	0/2:14,0,8:24:181,223,255,0,255,255	0/1:17,12,0:30:255,0,255,255,255,255
+chr21	37634762	chr21:37634762:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:10,13:26:173,0,110	0/1:16,19:37:246,0,191
+chr21	37645018	chr21:37645018:M	TTTTTTTTTTTTTTTTTT	<14>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,7:16:146,176,255,0,210,186	1/2:0,10,3:14:255,76,58,255,0,251	0/1:7,11,0:25:255,0,166,255,185,255
+chr21	37649921	chr21:37649921:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11,2:13:255,33,0,204,1,169	1/1:0,23,0:24:255,72,0,255,70,255	1/2:0,13,8:22:255,123,82,241,0,183
+chr21	37654106	chr21:37654106:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,10:16:119,0,10	0/1:3,2:9:26,0,42	0/1:6,1:9:1,0,74
+chr21	37654415	chr21:37654415:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:34:0,100,255	0/1:25,17:47:173,0,255	0/1:21,18:44:205,0,255
+chr21	37655180	chr21:37655180:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<19>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,3,12:18:255,135,89,48,13,0	1/2:0,3,3:9:160,29,11,29,0,11	1/2:0,9,7:16:255,70,22,88,0,40
+chr21	37655225	chr21:37655225:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<18.5>,<22.5>,<23.5>	.	.	Motif=GA	GT:AD:DP:PL	1/3:0,8,0,5:15:255,147,123,255,76,255,210,0,208,192	2/3:0,0,3,8:12:255,255,255,106,106,70,52,52,0,17	1/2:0,10,11,1:23:255,255,255,255,0,226,255,141,249,255
+chr21	37661799	chr21:37661799:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:32:255,95,0	1/1:0,29:29:255,85,0	1/1:0,42:42:255,124,0
+chr21	37663464	chr21:37663464:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,46:47:255,120,0	0/1:22,23:45:255,0,255	0/1:18,36:55:255,0,186
+chr21	37664793	chr21:37664793:M	TTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,2:7:189,35,14,87,0,67	0/1:2,4,1:9:106,0,47,41,36,85	1/2:1,3,8:14:237,91,105,7,0,18
+chr21	37669569	chr21:37669569:M	TGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,10:27:255,255,233,255,0,255	0/1:9,20,0:32:255,0,66,255,159,255	0/2:12,0,11:25:252,255,255,0,220,255
+chr21	37677690	chr21:37677690:M	TCCATCCATTTATCCATTCATTCAATCCATCCATCCATCCA	<33.8>	.	.	Motif=TCCA	GT:AD:DP:PL	0/1:19,10:29:37,0,255	0/0:16,5:21:0,1,255	0/0:22,4:26:0,29,255
+chr21	37677771	chr21:37677771:M	TCCATCCATCCATCCATCCACCCACCTATCCACCCACCCATCCA	<33.8>	.	.	Motif=TCCA	GT:AD:DP:PL	1/1:0,10:10:122,28,0	1/1:0,5:5:61,14,0	1/1:0,4:4:49,11,0
+chr21	37684349	chr21:37684349:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:255,0,200	1/1:2,27:32:255,57,0	0/1:9,25:42:255,0,124
+chr21	37688121	chr21:37688121:M	TTCTTCTTCTT	<2.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:20,19:39:253,0,255	0/1:18,24:42:255,0,203	0/0:62,0:62:0,183,255
+chr21	37690770	chr21:37690770:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:17:0,14,236	0/1:11,10:22:117,0,125	0/1:4,8:13:114,0,33
+chr21	37698699	chr21:37698699:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,7:21:67,0,187	1/1:2,17:19:255,21,0	0/1:7,4:12:38,0,100
+chr21	37701396	chr21:37701396:M	TGTGTGTGTGTGTGTG	<9>,<10>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,21,13:34:255,249,153,255,0,255	0/2:24,0,21:47:255,255,255,0,255,255	0/1:18,15,0:34:186,0,243,243,255,255
+chr21	37702235	chr21:37702235:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:7:118,0,11	1/1:0,1:1:27,3,0	0/1:1,3:6:73,0,16
+chr21	37704661	chr21:37704661:M	TCATCATCATCATCATCATCATCATC	<9.7>,<10.7>	.	.	Motif=TCA	GT:AD:DP:PL	1/2:0,15,12:27:255,224,148,241,0,205	0/2:20,0,10:30:199,174,255,0,255,255	1/1:0,27,0:27:255,80,0,255,80,255
+chr21	37709147	chr21:37709147:M	AAAGGAAAGGAA	<2.6>	.	.	Motif=AAAGG	GT:AD:DP:PL	0/1:30,19:49:255,0,255	0/0:40,0:40:0,120,255	1/1:0,44:44:255,132,0
+chr21	37709515	chr21:37709515:M	AAAAAAAAGAAAAGAAAAGAAAAGAAA	<6.4>,<7.6>	.	.	Motif=AAAAG	GT:AD:DP:PL	1/1:0,13,0:13:254,39,0,255,39,255	2/2:0,0,12:12:255,255,255,36,36,0	1/1:0,31,0:31:255,92,0,255,93,255
+chr21	37716380	chr21:37716380:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:27:140,0,192	0/0:27,1:32:0,76,255	0/1:4,20:27:255,0,2
+chr21	37720693	chr21:37720693:M	TTTTCTTTTCTTTTTTTTTTTTTTTT	<24>,<25>,<27>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,2,5,3:10:144,96,119,54,45,60,112,55,0,152	1/3:1,6,0,3:10:183,35,74,138,81,164,146,0,101,156	2/2:2,1,13,0:16:211,190,241,11,29,0,252,255,42,255
+chr21	37727459	chr21:37727459:M	GTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:1,24:25:255,56,0	1/1:2,23:25:255,36,0
+chr21	37728699	chr21:37728699:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:21,16:39:255,0,255	0/0:25,0:28:0,80,255	1/1:2,39:43:255,72,0
+chr21	37731101	chr21:37731101:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTG	<17>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,21:21:255,255,255,62,63,0	1/2:0,11,6:20:255,113,123,213,0,255	2/2:0,0,32:32:255,255,255,94,96,0
+chr21	37737463	chr21:37737463:M	GTTTGTTTGTTT	<2>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:29,16:45:158,0,255	0/0:48,0:48:0,142,255
+chr21	37739914	chr21:37739914:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,29:59:255,0,255	1/1:1,35:38:255,81,0	0/1:32,26:59:255,0,255
+chr21	37745073	chr21:37745073:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<14>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16,0:17:255,48,0,255,39,255	2/2:0,0,3:4:98,98,98,12,12,0	1/1:0,13,1:15:255,42,0,255,17,255
+chr21	37764384	chr21:37764384:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:21:255,53,0	0/1:15,8:27:142,0,255	1/1:0,18:23:255,57,0
+chr21	37769413	chr21:37769413:M	TTATTATTATTATTATTATTATTATTATTATTA	<9>,<10>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,15,19:34:255,255,255,255,0,190	0/2:3,0,6:9:82,92,170,0,54,28	1/2:0,15,16:31:255,255,210,255,0,191
+chr21	37796767	chr21:37796767:M	CTTTCTTTCTTTCTTT	<6.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:10,6:16:126,0,246	0/0:14,0:14:0,42,255	1/1:0,9:14:255,26,0
+chr21	37814897	chr21:37814897:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3:14:11,0,150	0/0:11,1:14:0,2,143	0/1:3,8:13:120,0,13
+chr21	37818194	chr21:37818194:M	GTGTGTGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>,<27>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,9,4:16:255,43,91,242,0,255	2/2:2,0,17:20:255,255,255,24,60,0	1/1:0,9,0:12:255,30,0,255,30,255
+chr21	37819247	chr21:37819247:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,25:36:255,0,101	0/0:48,2:51:0,114,255	0/1:30,27:57:255,0,255
+chr21	37819800	chr21:37819800:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:26:255,68,0	1/1:0,27:32:255,94,0	0/1:13,14:30:255,0,255
+chr21	37826612	chr21:37826612:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:40:239,0,255	0/1:30,22:52:237,0,255	0/0:41,0:41:0,121,255
+chr21	37835805	chr21:37835805:M	ACCCTAACCCTAACCCTAACCCTAACCCTAACCCT	<4.8>	.	.	Motif=ACCCTA	GT:AD:DP:PL	0/1:6,19:25:255,0,42	0/0:26,0:26:0,77,255	0/1:15,17:32:226,0,188
+chr21	37837714	chr21:37837714:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,17:40:232,0,250	0/0:26,1:27:0,61,255	0/1:19,17:36:206,0,242
+chr21	37844065	chr21:37844065:M	TTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,10,0:35:182,0,255,185,255,255	0/0:33,0,0:35:0,105,255,105,255,255	1/2:0,9,10:19:255,180,126,161,0,108
+chr21	37846354	chr21:37846354:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<19>,<20>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,9,0,0:16:255,255,240,178,0,151,255,157,177,255,255,247,167,255,255	2/4:0,0,12,1,5:18:255,255,255,141,141,102,255,255,123,255,255,255,0,184,255	1/3:0,8,0,12,0:21:255,255,255,255,196,255,229,0,217,192,255,255,255,229,255
+chr21	37847391	chr21:37847391:M	CTGCACCTGCAC	<1.8>	.	.	Motif=CTGCAC	GT:AD:DP:PL	1/1:0,25:26:255,72,0	1/1:0,21:21:255,58,0	1/1:0,23:23:255,64,0
+chr21	37850958	chr21:37850958:M	ATTGATTGATTGATT	<2.8>	.	.	Motif=ATTG	GT:AD:DP:PL	1/1:0,5:6:76,17,0	0/0:28,2:30:0,58,255	0/0:25,1:26:0,60,255
+chr21	37851900	chr21:37851900:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,11:31:115,0,255	0/0:30,1:33:0,79,255	0/1:22,16:38:181,0,255
+chr21	37853146	chr21:37853146:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:15:81,0,99	0/1:20,11:34:99,0,255	0/0:32,1:37:0,89,255
+chr21	37853836	chr21:37853836:M	ATATATATATGTATATATATATATATA	<16.5>,<20.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,16,6:23:255,175,127,255,0,255	2/2:0,0,1:1:31,31,31,3,3,0	0/1:9,7,0:16:167,0,216,194,237,255
+chr21	37859488	chr21:37859488:M	TATATATATATATATATATATATATATATATATATATATATATA	<13>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:5:146,15,0	.	1/1:0,2:2:60,6,0
+chr21	37863847	chr21:37863847:M	TTTTTTTTTTTTTGTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,11:13:255,36,0	1/1:0,5:8:154,18,0
+chr21	37864114	chr21:37864114:M	TTTTTTTTTTTTGTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:133,0,255	0/1:20,17:38:193,0,244	0/1:24,14:40:139,0,255
+chr21	37864862	chr21:37864862:M	TCTCTCTCTCT	<7.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,15:33:255,0,255	0/1:16,11:32:179,0,255	0/1:18,16:38:255,0,255
+chr21	37864872	chr21:37864872:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:26:82,0,120	0/1:10,5:17:26,0,95	0/1:11,12:29:89,0,121
+chr21	37878265	chr21:37878265:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:39:0,95,255	0/0:39,0:40:0,117,255	0/1:17,19:38:249,0,204
+chr21	37879715	chr21:37879715:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,10,0:24:255,0,136,175,148,255	0/2:4,3,6:15:141,36,121,0,53,54	0/1:6,6,0:18:156,0,146,90,127,185
+chr21	37880101	chr21:37880101:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:27:237,0,255	0/1:16,10:28:202,0,255	1/1:0,17:22:255,54,0
+chr21	37881471	chr21:37881471:M	GAGAGAGAGAGAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	0/1:18,13:32:163,0,250	0/1:13,18:31:233,0,142	1/1:0,37:43:255,122,0
+chr21	37891265	chr21:37891265:M	ACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:51,0:51:0,153,255	0/0:43,0:43:0,129,255	0/1:19,14:33:255,0,255
+chr21	37898583	chr21:37898583:M	AAAAGAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:13:0,38,236	0/1:14,15:30:172,0,164	0/0:21,0:24:0,69,255
+chr21	37903723	chr21:37903723:M	AAAAACAAAACAAAACAAAACAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:33,0:33:0,97,255	0/1:18,14:33:170,0,237
+chr21	37914009	chr21:37914009:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<24.5>,<25.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,2,4:8:173,141,127,70,68,49,26,20,0,3	2/3:0,0,3,5:8:188,146,128,61,59,38,37,29,0,14	1/3:0,3,0,6:9:186,133,113,99,70,82,35,0,34,43
+chr21	37914917	chr21:37914917:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,84,255	0/0:39,3:43:0,73,255	0/1:19,21:40:255,0,225
+chr21	37922389	chr21:37922389:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1:35:0,84,255	0/0:26,2:28:0,47,255	0/1:22,13:38:130,0,255
+chr21	37930956	chr21:37930956:M	GTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:27:0,81,255	0/0:28,0:29:0,87,255	0/1:14,9:24:178,0,255
+chr21	37939632	chr21:37939632:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,45:47:255,102,0	1/1:3,48:53:255,92,0	1/1:1,62:68:255,170,0
+chr21	37943341	chr21:37943341:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:13:40,0,102	0/1:7,6:13:62,0,79	0/1:10,5:16:49,0,125
+chr21	37955096	chr21:37955096:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:26,16:42:175,0,255	0/0:37,0:42:0,122,255	0/1:28,18:48:190,0,255
+chr21	37966370	chr21:37966370:M	CACACACACACACACACACACACACACACA	<19>	.	.	Motif=CA	GT:AD:DP:PL	0/0:32,0:34:0,99,255	0/1:16,16:35:255,0,255	0/0:29,0:31:0,93,255
+chr21	37970197	chr21:37970197:M	TGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTG	<30>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,13:13:223,38,0	1/1:1,5:10:66,1,0	1/1:1,6:7:84,4,0
+chr21	37980924	chr21:37980924:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:30:0,87,255	0/1:17,31:55:255,0,255	0/0:28,0:29:0,87,255
+chr21	37981360	chr21:37981360:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:73,0,1	1/1:0,1:1:17,3,0	0/0:2,0:4:0,2,37
+chr21	37987430	chr21:37987430:M	TATGTATGTATGTATGTATGTATGTATGCATGCATGCGTGTGTGTGTGTATGTATGTATGTATGTATGTATGTAT	<12.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:3,0:3:0,9,87	1/1:0,3:5:111,15,0	0/0:6,0:7:0,18,173
+chr21	37987502	chr21:37987502:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<13.2>,<14.2>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,0,12:12:255,209,175,36,34,0	1/2:0,9,8:18:255,112,62,127,0,87	2/2:0,0,22:22:255,255,255,66,63,0
+chr21	37987932	chr21:37987932:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:41:255,121,0	0/1:21,27:50:255,0,236	1/1:0,42:44:255,129,0
+chr21	37990432	chr21:37990432:M	AGGAAGGAAGGAAGGAAGGA	<4>	.	.	Motif=AGGA	GT:AD:DP:PL	1/1:0,13:13:167,36,0	0/0:14,3:17:0,9,139	1/1:0,6:6:77,17,0
+chr21	37990451	chr21:37990451:M	AGAAAGAAAAGAAAAAGAAAGAAGAAAG	<11>,<11.5>	.	.	Motif=AGAA	GT:AD:DP:PL	1/1:0,16,4:20:255,60,0,229,1,169	0/1:13,4,1:19:102,0,255,42,255,255	1/2:0,12,5:18:255,72,21,171,0,120
+chr21	37993413	chr21:37993413:M	TGTGTGTGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,42:45:255,127,0	0/1:23,13:38:92,0,205	1/1:0,44:44:255,125,0
+chr21	37993429	chr21:37993429:M	TATATATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,25:36:255,20,0	0/0:29,5:37:0,33,255	0/1:15,14:37:103,0,150
+chr21	38011592	chr21:38011592:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:22:255,51,0	0/1:9,6:20:127,0,218	1/1:0,16:19:255,53,0
+chr21	38022063	chr21:38022063:M	ACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/0:21,0:22:0,64,255	0/1:8,7:15:76,0,93	0/0:31,0:33:0,96,255
+chr21	38023059	chr21:38023059:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,5:21:40,0,195	0/0:22,0:22:0,64,255	0/1:4,3:8:30,0,58
+chr21	38026017	chr21:38026017:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:68,9,0	1/1:0,3:3:87,9,0	.
+chr21	38028769	chr21:38028769:M	AGGAGAAGGAGGAGGAGGAGGTGGTGGTGGAGGAGGAGGAGGAGGAGGA	<14.3>	.	.	Motif=AGG	GT:AD:DP:PL	0/0:5,0:6:0,6,124	0/0:2,0:2:0,6,58	0/1:6,9:16:199,0,123
+chr21	38034812	chr21:38034812:M	AAATAAATAAATAAATAAAT	<4>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:11,5:17:37,0,136	0/0:38,0:38:0,110,255	0/0:11,2:13:0,5,148
+chr21	38037800	chr21:38037800:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTG	<13>,<17>,<18>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,15,9,0:24:255,241,196,255,0,255,255,149,255,255	2/3:0,0,16,14:30:255,255,255,225,226,139,255,255,0,171	0/1:15,17,0,0:33:255,0,255,255,255,255,255,255,255,255
+chr21	38053207	chr21:38053207:M	CACACACACACACACACACACACACACACACAC	<14.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,7:16:255,183,161,212,0,210	0/2:15,0,7:25:130,188,255,0,255,255	0/1:9,15,0:25:255,0,178,255,226,255
+chr21	38074884	chr21:38074884:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:32:92,0,251	0/0:27,1:32:0,74,255	0/1:16,15:34:167,0,183
+chr21	38075752	chr21:38075752:M	AAAAAAAAAAAAAAAGAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:118,0,92	0/1:10,9:23:100,0,105	0/0:15,2:19:0,22,230
+chr21	38077058	chr21:38077058:M	ACACACACACACACACACACACACACACACACACTCACACACAC	<23>,<24>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/3:8,0,0,13:22:255,255,255,216,255,255,0,133,212,180	1/3:0,9,1,2:12:185,54,24,137,18,129,146,0,130,224	0/2:7,0,11,0:18:255,178,244,0,113,148,179,255,186,255
+chr21	38088584	chr21:38088584:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:37:255,0,188	0/1:12,17:31:219,0,128	0/0:28,1:30:0,70,255
+chr21	38091632	chr21:38091632:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,10:31:92,0,255	0/1:16,9:26:80,0,202	0/0:18,1:20:0,41,255
+chr21	38099746	chr21:38099746:M	TTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,17:24:245,0,39	0/1:7,11:22:153,0,67	0/0:18,3:23:0,14,255
+chr21	38100079	chr21:38100079:M	AAAAAAAAAGAAAAAGAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,11:27:130,0,215	0/1:13,12:25:142,0,160	0/0:39,0:39:0,115,255
+chr21	38103743	chr21:38103743:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,8:31:130,0,255	0/1:15,9:27:177,0,255	0/0:34,0:36:0,105,255
+chr21	38106141	chr21:38106141:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:90,17,0	1/1:0,4:4:58,11,0	1/1:1,8:9:104,11,0
+chr21	38108213	chr21:38108213:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,11:24:255,193,246,229,0,255	1/2:3,11,5:19:175,40,93,143,0,255	2/2:4,0,27:31:255,255,255,21,81,0
+chr21	38112872	chr21:38112872:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:127,0,108	0/1:6,8:15:96,0,71	0/0:28,2:30:0,52,255
+chr21	38115945	chr21:38115945:M	TACTACTACTA	<2.7>	.	.	Motif=TAC	GT:AD:DP:PL	0/1:24,7:31:46,0,255	0/1:22,8:30:60,0,255	0/0:43,0:43:0,127,255
+chr21	38116882	chr21:38116882:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,16:24:223,0,76	0/1:9,10:21:116,0,106	0/0:16,1:20:0,40,255
+chr21	38122819	chr21:38122819:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,19:34:255,0,255	0/1:14,17:33:255,0,255	0/0:43,0:45:0,134,255
+chr21	38124727	chr21:38124727:M	AAAAAAAAAAGGAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,20:37:255,0,212	0/1:17,21:38:255,0,191	0/0:37,0:37:0,109,255
+chr21	38126691	chr21:38126691:M	ACACACACACACACACACACACACAC	<16>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,13:28:255,0,255	0/1:20,10:30:246,0,255	0/0:32,0:33:0,99,255
+chr21	38133687	chr21:38133687:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:11,20:32:255,0,113	1/1:0,19:23:255,19,0	0/0:39,0:40:0,117,255
+chr21	38137397	chr21:38137397:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,13:22:255,0,106	0/1:12,7:22:132,0,255	0/0:26,1:31:0,56,255
+chr21	38147210	chr21:38147210:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20:36:255,0,176	0/1:8,16:25:204,0,76	0/0:24,0:24:0,71,255
+chr21	38149138	chr21:38149138:M	ACACACACACACGCACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:4,29:33:255,27,0	1/1:0,29:29:255,85,0
+chr21	38163737	chr21:38163737:M	CTTCTCCTTCTTCTTCATCTCTGTCTTTTTCTTCTCTTCTTC	<13>	.	.	Motif=CTT	GT:AD:DP:PL	0/1:10,8:18:57,0,82	0/1:8,7:15:50,0,61	0/0:28,0:28:0,78,255
+chr21	38172637	chr21:38172637:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:9:36,0,64	0/1:7,7:17:74,0,92	0/0:10,1:11:0,15,159
+chr21	38182537	chr21:38182537:M	GAGAGAGAGAGAGAGAGAGAGAAAAAGAGAGAGAGAAAAAAAAGAGAGAGAGAGAGA	<26.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:10,8:19:167,0,217	0/1:12,9:22:185,0,255	0/0:24,0:24:0,72,255
+chr21	38187742	chr21:38187742:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,35:60:255,0,255	0/1:19,23:42:255,0,216	0/0:59,0:59:0,174,255
+chr21	38193147	chr21:38193147:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,23,159	0/1:15,5:20:26,0,195	0/1:17,3:21:0,0,235
+chr21	38193799	chr21:38193799:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,2:26:0,30,255	0/0:14,2:17:0,16,210	0/1:9,4:14:29,0,122
+chr21	38202389	chr21:38202389:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,24:51:255,0,255	0/1:35,28:63:255,0,255	0/0:52,2:54:0,121,255
+chr21	38211838	chr21:38211838:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:38:189,0,255	0/0:39,1:41:0,102,255	0/0:41,0:43:0,126,255
+chr21	38232138	chr21:38232138:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,15:37:193,0,251	0/1:23,17:42:189,0,255	0/0:41,1:43:0,105,255
+chr21	38237950	chr21:38237950:M	AACAACAACAAGAACAACA	<8.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:20,18:38:255,0,255	0/1:21,19:40:255,0,255	0/0:29,0:29:0,87,255
+chr21	38241968	chr21:38241968:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:8:49,0,30	0/1:1,1:2:11,0,11	0/1:6,1:9:11,0,77
+chr21	38256361	chr21:38256361:M	TATATATATATATATATATAATAT	<14>,<18>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,25,3:29:255,81,6,255,0,255	1/1:0,12,0:14:255,36,0,255,24,255	2/2:0,0,5:7:167,167,167,18,18,0
+chr21	38268551	chr21:38268551:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<28>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,4:21:255,48,77,255,0,255	2/2:1,0,5:7:72,90,164,5,20,0	1/1:0,11,0:13:255,36,0,255,36,255
+chr21	38277028	chr21:38277028:M	TGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,42:42:255,126,0	1/1:0,44:44:255,132,0	1/1:0,31:33:255,96,0
+chr21	38304059	chr21:38304059:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,37:39:255,77,0	1/1:1,42:43:255,109,0	1/1:2,41:46:255,98,0
+chr21	38306372	chr21:38306372:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,111,0	1/1:0,36:38:255,111,0	1/1:0,38:39:255,114,0
+chr21	38316512	chr21:38316512:M	ATATATATATATATGAAATATATATATATTTCTATATATAT	<19.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,5:5:91,15,0	1/1:0,17:17:255,50,0
+chr21	38319388	chr21:38319388:M	ACACACACACA	<4.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:3:39,8,0	1/1:0,4:4:51,11,0	1/1:0,3:3:39,8,0
+chr21	38327939	chr21:38327939:M	AAAGAAAGAAAGAAAGAAAGAAAG	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:29,0:34:0,90,255	0/0:25,0:27:0,77,255	0/1:20,21:43:255,0,255
+chr21	38334621	chr21:38334621:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,20:33:255,0,124	0/1:13,12:26:134,0,162	0/0:20,3:25:0,16,255
+chr21	38354650	chr21:38354650:M	ACACACACACACACACACAC	<11>,<12>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,22,0:35:255,0,148,255,247,255	0/2:17,2,13:32:255,201,255,0,255,255	0/1:20,13,1:34:156,0,255,189,255,255
+chr21	38356732	chr21:38356732:M	CACACACACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,14:33:179,0,255	0/0:30,0:31:0,88,255	0/1:16,10:27:112,0,232
+chr21	38386790	chr21:38386790:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,4:54:212,0,255	0/1:22,20:44:253,0,255	0/1:20,2:56:255,0,215
+chr21	38391956	chr21:38391956:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,19:39:242,0,255	0/1:18,14:33:151,0,237	0/1:23,20:43:239,0,255
+chr21	38397597	chr21:38397597:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,1,1:4:12,3,23,3,0,22	1/2:0,3,1:4:53,16,15,48,0,72	2/2:0,0,3:3:50,58,84,9,9,0
+chr21	38402713	chr21:38402713:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:13:35,0,59	0/0:9,0:9:0,25,119	1/1:3,9:16:124,4,0
+chr21	38406155	chr21:38406155:M	AAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,4:7:147,19,0	1/1:0,5:7:174,21,0
+chr21	38407635	chr21:38407635:M	TATATATATATTTAATGTATATTATATGTATACTATATATCACCTATATATAATATAT	<32>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:11:255,32,0	1/1:0,2:3:68,9,0	1/1:0,6:7:193,21,0
+chr21	38418271	chr21:38418271:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,21,0:24:255,71,0,255,70,255	1/2:0,11,11:23:255,192,125,201,0,137	1/1:0,18,0:22:255,53,0,255,62,255
+chr21	38418928	chr21:38418928:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:7:81,12,0	1/1:0,0:1:2,1,0	1/1:0,4:8:139,19,0
+chr21	38419509	chr21:38419509:M	ATACACATACACACACACA	<3.5>	.	.	Motif=ATACAC	GT:AD:DP:PL	1/1:1,39:40:255,93,0	1/1:0,33:34:255,99,0	1/1:0,32:32:255,96,0
+chr21	38420032	chr21:38420032:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:39:0,116,255	0/1:16,10:27:188,0,255	0/0:39,0:43:0,122,255
+chr21	38420289	chr21:38420289:M	TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,28:30:255,69,0	0/1:11,19:31:255,0,107	0/1:12,15:27:199,0,144
+chr21	38423085	chr21:38423085:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:8,13:21:166,0,79	0/1:7,9:18:119,0,65	0/0:17,2:19:0,21,255
+chr21	38423982	chr21:38423982:M	AAAAGAAAAGAAAAGAAAAGAAA	<5.6>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:18,17:35:226,0,245	0/1:21,14:35:152,0,255	0/1:23,18:41:218,0,255
+chr21	38426770	chr21:38426770:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,239	0/0:26,0:26:0,76,255	0/1:14,20:35:255,0,167
+chr21	38426931	chr21:38426931:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,100,0	1/1:1,36:37:255,91,0	1/1:1,30:32:255,76,0
+chr21	38429348	chr21:38429348:M	ACATATACATATATAATATGTACACATATACATATA	<2.7>	.	.	Motif=ACATAT	GT:AD:DP:PL	0/1:23,6:37:205,0,255	0/1:13,2:16:52,0,255	0/1:15,12:32:255,0,255
+chr21	38429655	chr21:38429655:M	ATATATACATATATGTGTATATATGTATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,1:1:40,3,0	.	1/1:0,4:4:156,12,0
+chr21	38429747	chr21:38429747:M	ACACACACACACACACACCACA	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,41,1:44:255,126,0,255,111,255	1/2:0,21,15:39:255,238,127,255,0,175	1/1:1,38,0:42:255,95,0,255,94,255
+chr21	38430080	chr21:38430080:M	TATTTTTTTTTTATTTTTA	<3>	.	.	Motif=TATTTT	GT:AD:DP:PL	0/1:13,11:24:189,0,237	0/0:35,0:35:0,105,255	0/1:14,21:35:255,0,228
+chr21	38436013	chr21:38436013:M	TTTTTTTCTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:99,0,97	0/1:8,4:13:43,0,100	0/1:7,8:16:96,0,88
+chr21	38436881	chr21:38436881:M	TTTTTTTTTTCTTTCTCTCTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,16:23:226,0,52	0/0:14,1:15:0,27,227	0/1:9,10:19:124,0,106
+chr21	38440788	chr21:38440788:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	3/3:0,0,0,4:7:128,128,128,124,124,121,13,13,13,0	1/1:0,8,0,0:11:255,27,0,255,27,249,255,27,255,255	2/3:0,0,5,4:9:255,251,247,112,112,92,134,130,0,118
+chr21	38444727	chr21:38444727:M	AAAAAAAAAAAAAA	<12>,<13>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	3/4:0,0,0,12,8:21:255,255,255,255,255,255,154,155,155,97,188,221,220,0,161	1/3:1,10,0,5,1:18:255,79,128,255,147,255,255,0,179,255,255,78,251,255,255	2/4:0,1,13,0,12:26:255,255,255,255,255,255,255,255,215,255,240,214,0,255,255
+chr21	38445116	chr21:38445116:M	CTTTCTTTCTTTCTTTCTT	<3.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:19,0:21:0,31,255	0/0:28,0:28:0,82,255	0/1:11,8:23:120,0,141
+chr21	38446227	chr21:38446227:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:3,0:4:0,9,88	1/1:0,31:32:255,96,0
+chr21	38448003	chr21:38448003:M	AGTATTAGTATT	<1.8>	.	.	Motif=AGTATT	GT:AD:DP:PL	0/0:47,0:47:0,141,255	0/1:16,23:39:255,0,255	0/1:26,24:50:255,0,255
+chr21	38450206	chr21:38450206:M	AAAAAAAAAACAAAGAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:26:255,58,0	1/1:0,19:20:255,58,0	1/1:0,31:31:255,91,0
+chr21	38453883	chr21:38453883:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:255,33,0	0/1:4,3:9:56,0,95	0/1:12,5:18:83,0,255
+chr21	38455095	chr21:38455095:M	TTTCTTTCTTTCTTTCTTTCTTTCTTT	<6.2>,<6.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,22,0:29:181,58,0,129,38,94	1/2:0,9,14:25:86,39,16,35,0,1	1/2:0,13,11:28:107,34,4,52,0,16
+chr21	38455119	chr21:38455119:M	TTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,24:28:255,255,255,48,66,0	1/2:0,21,9:30:255,221,170,255,0,255	1/2:0,19,12:32:255,255,255,255,0,255
+chr21	38456587	chr21:38456587:M	ATCCCCATCCCCATC	<2.8>	.	.	Motif=ATCCCC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,34:34:255,102,0	1/1:0,45:45:255,135,0
+chr21	38457436	chr21:38457436:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,2,22:26:255,255,255,39,39,0	1/2:0,17,17:35:255,248,194,255,0,205	1/2:0,14,9:23:255,136,94,248,0,184
+chr21	38458424	chr21:38458424:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,9,157	0/1:2,3:5:67,0,39	0/1:4,4:10:87,0,90
+chr21	38466301	chr21:38466301:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,9:25:255,229,169,255,0,255	1/2:0,8,7:16:255,169,132,209,0,176	2/2:0,1,14:18:255,255,255,50,19,0
+chr21	38468983	chr21:38468983:M	AAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:16:255,47,0	1/1:0,16:19:255,54,0	1/1:0,16:16:255,48,0
+chr21	38470258	chr21:38470258:M	TATTATTATTATTATTATTATTATTGTTATAATTAT	<11>	.	.	Motif=TAT	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,19:19:255,56,0	1/1:0,33:33:255,97,0
+chr21	38473160	chr21:38473160:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,48,0	1/1:0,10:13:255,33,0	1/1:0,12:16:255,44,0
+chr21	38473795	chr21:38473795:M	TGTGTGTGTGTGTGTATGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,18:19:187,40,0	0/1:9,6:16:33,0,53	1/1:5,16:21:121,2,0
+chr21	38473836	chr21:38473836:M	ATGTGTATGTGTACATGTTTGCGTATGTATGCATGTGTATGTGTGAGCGTATGTGTGTGTAAGTGTTGTATATGTGTGTATGTGTGTGTATATGTATGTGT	<11.5>	.	.	Motif=ATGTGT	GT:AD:DP:PL	1/1:0,8:9:209,27,0	1/1:0,10:10:243,30,0	1/1:0,11:11:255,33,0
+chr21	38474732	chr21:38474732:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,36:40:255,114,0	1/1:0,39:40:255,117,0
+chr21	38476984	chr21:38476984:M	TTCTTTTTTCTTTTCTTTCTTTC	<6.2>	.	.	Motif=TTCT	GT:AD:DP:PL	1/1:0,11:11:228,33,0	1/1:0,11:12:227,33,0	1/1:0,23:23:255,68,0
+chr21	38485462	chr21:38485462:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:208,23,0	0/1:3,9:13:126,0,14	1/1:1,11:14:194,22,0
+chr21	38487121	chr21:38487121:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:30:255,53,0	1/1:1,16:17:255,32,0	1/1:0,20:22:255,64,0
+chr21	38491207	chr21:38491207:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,26:32:255,20,0	1/1:1,20:25:255,45,0	1/1:0,20:24:255,67,0
+chr21	38503369	chr21:38503369:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,37:42:255,67,0	1/1:2,33:37:255,72,0	1/1:1,38:40:255,99,0
+chr21	38507527	chr21:38507527:M	TGAATGAGTGAATGAATGAATGAATGAATGAATGAA	<10>,<11>	.	.	Motif=TGAA	GT:AD:DP:PL	1/2:0,9,8:17:255,153,106,149,0,125	1/2:0,9,15:24:255,255,203,139,0,94	1/2:0,14,12:26:255,223,151,225,0,189
+chr21	38507950	chr21:38507950:M	CACACACACGCACATGCACACACACAGAGACACACAGACACACACACATGCACACACACAGAGACACACAAACACACA	<8>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,3:3:84,9,0	1/1:0,4:6:112,12,0	0/1:4,1:7:11,0,99
+chr21	38513130	chr21:38513130:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:1,36:37:255,91,0	1/1:1,43:45:255,114,0
+chr21	38513139	chr21:38513139:M	AATAATAATAATA	<4.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:40,1:41:0,92,255	0/0:46,0:47:0,115,255	0/1:23,23:46:86,0,86
+chr21	38518237	chr21:38518237:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>,<12.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,7:19:255,113,77,224,0,172	2/2:1,0,18:19:255,255,255,38,56,0	0/1:7,12,0:19:255,0,147,218,126,255
+chr21	38520033	chr21:38520033:M	AACAAAAACAAAAA	<2.5>	.	.	Motif=AACAAA	GT:AD:DP:PL	1/1:0,29:30:255,89,0	0/1:25,17:43:243,0,255	1/1:0,49:50:255,148,0
+chr21	38537442	chr21:38537442:M	ATATATATATATATGTATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:48,0:49:0,144,255	0/0:31,0:31:0,93,255	0/1:26,22:49:255,0,255
+chr21	38539894	chr21:38539894:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,8,46	0/0:7,0:8:0,23,130	0/1:2,6:10:86,0,16
+chr21	38541913	chr21:38541913:M	AAATTAAATTAAATT	<4>	.	.	Motif=AAATT	GT:AD:DP:PL	0/1:17,10:27:114,0,250	0/0:43,0:43:0,127,255	0/1:20,19:39:243,0,255
+chr21	38543738	chr21:38543738:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:18:128,0,149	0/0:9,0:10:0,27,239	0/0:14,0:19:0,37,255
+chr21	38548451	chr21:38548451:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:20:89,0,163	0/1:17,5:22:23,0,232	0/0:35,1:39:0,95,255
+chr21	38548615	chr21:38548615:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:124,12,0	0/0:0,0:2:0,3,14	0/1:2,1:5:28,0,62
+chr21	38552847	chr21:38552847:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,1,3:21:43,46,255,0,250,255	0/0:36,1,0:38:0,94,255,111,255,255	1/2:1,14,8:24:255,131,83,189,0,188
+chr21	38555327	chr21:38555327:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,15:36:176,0,255	0/0:45,0:45:0,132,255	0/1:20,18:40:231,0,249
+chr21	38559384	chr21:38559384:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,0:5:5,0,22	1/1:0,0:3:5,2,0	0/1:5,4:10:35,0,63
+chr21	38572193	chr21:38572193:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:7:125,21,0	0/1:2,6:9:85,0,8	0/1:10,5:19:34,0,156
+chr21	38579826	chr21:38579826:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:22:38,0,234	0/0:19,0:20:0,58,255	0/1:11,6:18:57,0,158
+chr21	38586177	chr21:38586177:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<9.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,20:20:255,255,255,60,60,0	1/2:0,8,1:10:255,28,1,255,0,255	2/2:0,0,2:4:104,103,103,9,8,0
+chr21	38587361	chr21:38587361:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:28:175,0,175	0/1:4,14:18:191,0,17	1/1:2,16:18:252,17,0
+chr21	38592572	chr21:38592572:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>,<16>,<19>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,9,0,8:18:255,144,191,255,221,255,255,0,255,237	2/3:0,0,14,10:24:255,255,255,171,255,232,255,255,0,255	1/1:0,37,0,0:38:255,114,0,255,114,255,255,114,255,255
+chr21	38596057	chr21:38596057:M	GGGGGGGGGGGG	<10>,<11>	.	.	Motif=G	GT:AD:DP:PL	0/2:7,0,2:9:10,31,206,0,124,101	0/2:16,2,9:27:100,96,255,0,238,198	1/1:0,7,0:7:197,21,0,143,21,124
+chr21	38597473	chr21:38597473:M	ACACACACACACACACACACACACACACGCACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,21,4:26:255,97,30,255,0,255	1/1:0,28,0:29:255,83,0,255,84,255	2/2:0,0,24:26:255,255,255,78,72,0
+chr21	38610527	chr21:38610527:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:17,12:30:119,0,205	0/0:37,1:38:0,94,255
+chr21	38619327	chr21:38619327:M	TCCTCATCCTCCTCCTCTCTATTCCTCTTGCTCCCTCCCCTCATCCTCCTCCTC	<5.7>	.	.	Motif=TCC	GT:AD:DP:PL	0/1:12,11:23:208,0,222	0/1:11,8:19:140,0,211	0/1:21,13:34:218,0,255
+chr21	38627944	chr21:38627944:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,6:19:54,0,176	1/1:2,8:15:133,2,0	0/0:23,0:24:0,68,255
+chr21	38633879	chr21:38633879:M	AAAAAAAAAAAAA	<14>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,12,0,9:21:255,246,208,255,166,255,223,0,222,255	2/3:0,2,14,13:32:255,255,255,254,223,174,247,174,0,179	1/1:4,33,2,1:40:255,41,0,255,68,255,255,83,255,255
+chr21	38646280	chr21:38646280:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:44,0,62	0/1:6,4:12:44,0,70	0/0:12,0:14:0,40,224
+chr21	38660031	chr21:38660031:M	GGAAAGGAAAGG	<1.2>	.	.	Motif=GGAAA	GT:AD:DP:PL	0/0:23,0:23:0,69,255	0/0:50,0:50:0,150,255	0/1:13,12:25:255,0,255
+chr21	38662293	chr21:38662293:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,17:29:244,0,122	0/1:12,13:26:155,0,146	0/1:18,17:35:209,0,228
+chr21	38663352	chr21:38663352:M	GAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/0:34,0:34:0,102,255	0/1:19,10:30:184,0,255
+chr21	38671906	chr21:38671906:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/0:34,4:38:0,42,255	0/1:19,12:34:136,0,250
+chr21	38673768	chr21:38673768:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:9,12:21:169,0,112	0/1:7,20:27:255,0,48	0/1:9,17:26:242,0,93
+chr21	38675358	chr21:38675358:M	AAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:21,0,21	0/1:5,3:9:56,0,117	0/1:8,1:11:1,0,198
+chr21	38685288	chr21:38685288:M	AAATAAATAAATAAATAAATAAATAAATAAATAA	<9.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:18,0:18:0,53,255	0/1:13,10:23:120,0,177
+chr21	38692825	chr21:38692825:M	AAAAAAAAGAAAGGAAAAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,47,0	0/1:3,7:13:93,0,34	0/1:9,11:22:149,0,97
+chr21	38703696	chr21:38703696:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,10:30:107,0,227	0/1:7,5:15:44,0,107	0/1:16,6:24:40,0,228
+chr21	38707309	chr21:38707309:M	ATATATATATATATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13:16:255,41,0	1/1:0,6:7:175,21,0	1/1:0,10:10:255,30,0
+chr21	38707403	chr21:38707403:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,14:25:203,0,106	0/1:5,10:15:138,0,47	0/1:11,20:31:255,0,115
+chr21	38711058	chr21:38711058:M	AAAAAAAATAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:42:255,0,255	0/1:22,9:32:164,0,255	0/1:14,21:35:255,0,255
+chr21	38713078	chr21:38713078:M	GGGGGGAGGGGGGGGCGGGGGGGGGG	<27>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:50,9,0	0/1:1,1:2:10,0,10	1/1:0,2:3:33,6,0
+chr21	38718363	chr21:38718363:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:97,0,31	0/1:12,9:21:94,0,147	0/1:12,8:20:85,0,156
+chr21	38724538	chr21:38724538:M	GATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<11.5>,<14.5>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:15,5,0:25:63,0,234,116,152,255	0/1:10,8,0:22:123,0,139,172,103,255	1/2:1,10,9:24:235,76,176,195,0,238
+chr21	38724617	chr21:38724617:M	AGCTAGCTAGCTA	<4.2>	.	.	Motif=AGCT	GT:AD:DP:PL	0/1:18,24:42:255,0,255	0/1:17,10:27:200,0,255	0/1:21,32:53:255,0,255
+chr21	38726735	chr21:38726735:M	TTTCTTTTTCTTTTCTTT	<2.2>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:33,11:46:161,0,255	0/1:36,10:51:122,0,255	0/1:45,16:63:240,0,255
+chr21	38732116	chr21:38732116:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:2:0,6,28	0/1:2,3:5:34,0,18	0/1:1,1:2:11,0,11
+chr21	38733539	chr21:38733539:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<42>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/1:10,13:23:255,0,205	0/0:24,0:24:0,72,255
+chr21	38735929	chr21:38735929:M	AAAAAAAAAAGAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,97,0	1/1:1,27:28:255,65,0	0/1:25,22:47:255,0,255
+chr21	38737615	chr21:38737615:M	AAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAATAAAAAAAAAAAGAAAA	<56>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:173,21,0	1/1:0,3:3:82,9,0	0/1:5,5:14:104,0,124
+chr21	38757606	chr21:38757606:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:4,8:12:123,0,42	0/1:7,9:16:119,0,80	0/1:10,15:25:212,0,115
+chr21	38762099	chr21:38762099:M	TTTTTTTTTTTTTCTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:24:99,0,211	1/1:3,33:37:255,55,0	0/1:12,19:32:255,0,126
+chr21	38773030	chr21:38773030:M	AAGAAGAGAAGGCAAGAAGAAGAAGAAGAA	<9>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,26:26:255,77,0	0/1:13,18:31:236,0,144	1/1:0,38:38:255,112,0
+chr21	38781316	chr21:38781316:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,3:4:67,0,15
+chr21	38793516	chr21:38793516:M	TTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:27:255,69,0	0/1:13,16:34:255,0,255	1/1:1,17:23:255,38,0
+chr21	38799325	chr21:38799325:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:49:255,145,0	0/1:23,20:43:232,0,255	1/1:0,54:54:255,159,0
+chr21	38799673	chr21:38799673:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,32:35:255,65,0	0/1:17,12:31:125,0,235	1/1:1,25:26:255,58,0
+chr21	38807418	chr21:38807418:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,7:12:209,102,86,41,0,46	0/1:6,2,1:11:17,0,74,11,82,157	1/2:1,2,3:8:100,49,49,12,0,23
+chr21	38808580	chr21:38808580:M	GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGTGTGTGT	<27.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,5:5:135,15,0	0/1:6,7:15:148,0,129	1/1:0,16:16:255,48,0
+chr21	38812782	chr21:38812782:M	AATAATAATAATAATAAT	<5>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,25:25:255,74,0	0/1:22,16:38:178,0,255	1/1:0,31:31:255,92,0
+chr21	38815171	chr21:38815171:M	TGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,27,0:29:255,66,0,255,84,255	0/1:22,12,0:38:115,0,255,213,255,255	1/2:0,11,15:26:255,255,255,199,0,240
+chr21	38834774	chr21:38834774:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/0:22,0:23:0,67,255	0/1:21,27:49:255,0,241
+chr21	38836215	chr21:38836215:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:25:0,74,255	0/1:20,17:37:255,0,255	0/0:31,0:31:0,93,255
+chr21	38836788	chr21:38836788:M	AAGAAGAAGAAGA	<3.7>	.	.	Motif=AAG	GT:AD:DP:PL	0/0:13,0:13:0,39,255	0/1:8,3:11:49,0,191	0/0:21,0:21:0,63,255
+chr21	38837711	chr21:38837711:M	ACACACATACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:12,4:16:23,0,163	0/1:8,10:18:115,0,81	0/0:23,1:24:0,53,255
+chr21	38848893	chr21:38848893:M	TTTTTTCTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41:42:255,105,0	0/1:16,18:34:214,0,181	1/1:4,28:33:255,25,0
+chr21	38854557	chr21:38854557:M	AGAAAAGAACAGAAAA	<3.4>	.	.	Motif=AGAAA	GT:AD:DP:PL	1/1:0,46:46:255,138,0	0/1:19,17:36:255,0,255	1/1:0,48:48:255,144,0
+chr21	38866716	chr21:38866716:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:12:54,0,90	0/1:2,4:6:51,0,17	0/0:20,0:21:0,61,255
+chr21	38867617	chr21:38867617:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<12>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,7,10:17:255,165,144,133,0,86	1/2:0,6,8:14:255,123,105,108,0,68	2/2:0,0,15:15:255,255,255,44,44,0
+chr21	38870270	chr21:38870270:M	TGTGTGTGCGTGCATGTGTGTGTGTGTTTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,0:29:0,85,255	0/0:25,0:25:0,74,255	0/1:13,14:27:182,0,163
+chr21	38874621	chr21:38874621:M	AAAAAAAAAATAAAAAATAAAAAATAAAATAAAATAAAA	<40>,<50>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,6:18:255,153,117,225,0,255	1/1:2,12,0:14:180,6,0,219,41,255	1/2:0,15,5:20:255,124,80,255,0,255
+chr21	38878438	chr21:38878438:M	AAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:28,2,23:55:255,255,255,0,255,255	2/2:0,1,30:34:255,255,255,90,70,0	0/1:17,29,0:46:255,0,176,255,255,255
+chr21	38886454	chr21:38886454:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,3:37:0,52,255	0/0:38,3:42:0,70,255	0/1:19,17:38:211,0,246
+chr21	38904148	chr21:38904148:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,12,0:29:255,180,255,226,0,255,255,255,255,255	1/1:0,23,0,0:25:255,73,0,255,75,255,255,75,255,255	2/3:0,0,11,6:17:255,255,255,164,164,131,190,255,0,255
+chr21	38905111	chr21:38905111:M	TAGATAGAAAGATAGATAGATAGATAGATAGACAGATAGATAGATAGAT	<33.8>	.	.	Motif=TAGA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:21,0:21:0,63,255	0/1:20,7:27:6,0,255
+chr21	38908412	chr21:38908412:M	TTCCCATTCCCAT	<1.7>	.	.	Motif=TTCCCA	GT:AD:DP:PL	0/0:35,1:36:0,81,255	0/1:18,6:24:89,0,255	0/0:38,0:38:0,114,255
+chr21	38911271	chr21:38911271:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:28,0:28:0,82,255	0/1:10,16:26:222,0,110
+chr21	38915411	chr21:38915411:M	ATATATATATATATATATATATA	<9.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,28,6:37:255,92,0,255,32,255	1/1:0,19,6:28:255,66,0,249,9,175	1/2:0,20,30:50:255,255,198,221,0,87
+chr21	38916606	chr21:38916606:M	TTTGTTTGTTTGTTT	<2.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:29,0:29:0,85,255	0/1:31,16:47:163,0,255
+chr21	38917678	chr21:38917678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:25:255,54,0	1/1:1,23:24:255,53,0	1/1:1,36:37:255,91,0
+chr21	38920349	chr21:38920349:M	TTTTTTTTTCTTTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:18:255,54,0	1/1:0,18:19:255,57,0	1/1:0,2:4:76,11,0
+chr21	38924493	chr21:38924493:M	AAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:6:128,17,0	1/1:0,5:6:148,18,0	1/1:0,8:8:219,24,0
+chr21	38931367	chr21:38931367:M	AACAACAACAA	<4.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,32:33:255,89,0	1/1:0,33:34:255,102,0
+chr21	38934489	chr21:38934489:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,17:20:255,3,0	0/1:4,16:21:227,0,9	1/1:1,16:17:255,32,0
+chr21	38963875	chr21:38963875:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<25>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,1,1:2:38,38,38,12,12,9,27,27,0,24	2/3:0,0,4,3:7:142,142,142,35,35,23,106,106,0,98	1/1:0,5,0,0:5:146,15,0,146,15,146,146,15,146,146
+chr21	38965049	chr21:38965049:M	AAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,1,1	0/0:0,0:1:0,0,0	1/1:0,7:11:229,16,0
+chr21	38966587	chr21:38966587:M	CCCCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,19:23:255,66,0	1/1:0,11:11:255,33,0	1/1:0,7:7:181,21,0
+chr21	38967399	chr21:38967399:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:3:2,1,0	1/1:0,0:2:2,1,0	1/1:0,7:9:229,24,0
+chr21	38973998	chr21:38973998:M	CTCTCTCTCTCTCTTTCTCTCTCTCTCTCT	<16>	.	.	Motif=CT	GT:AD:DP:PL	0/0:24,0:25:0,74,255	0/0:26,0:28:0,82,255	0/1:16,11:29:126,0,219
+chr21	38982396	chr21:38982396:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,25:37:255,0,75	0/1:12,17:30:211,0,117	0/1:16,13:32:154,0,198
+chr21	38986349	chr21:38986349:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:20:0,56,255	0/1:4,7:12:161,0,75	0/0:16,0:19:0,54,255
+chr21	38994771	chr21:38994771:M	TCTCTGTCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTGTGTGTCTCTCTGTCTCCCCTCTCCCTCTCTCTCTCTGTCTCTC	<10>,<30.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,3,1:6:188,40,31,148,0,142	0/0:1,0,0:1:0,3,28,3,28,28	1/2:0,6,8:14:255,200,182,255,0,255
+chr21	38997796	chr21:38997796:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,23,14:39:255,255,161,255,0,255	2/2:1,2,22:27:255,255,255,46,33,0	1/1:3,40,5:49:255,86,0,255,51,255
+chr21	39001725	chr21:39001725:M	TAAAAAAAAAAAAAAAAATACATAAAATAAAATAAAA	<7.6>,<7.8>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:4,4,2:11:65,0,48,21,32,115	1/2:1,6,3:10:157,38,29,80,0,95	0/0:13,0,0:15:0,43,255,44,255,255
+chr21	39015385	chr21:39015385:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:18:101,0,103	1/1:0,12:13:213,37,0	0/1:14,11:26:118,0,182
+chr21	39016706	chr21:39016706:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,19:20:255,57,0	1/1:0,21:23:255,66,0
+chr21	39019459	chr21:39019459:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,25:26:255,58,0	1/1:0,31:32:255,94,0	1/1:2,38:40:255,81,0
+chr21	39034634	chr21:39034634:M	AAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:57,6,0	0/1:1,4:6:91,0,13	1/1:0,3:3:85,9,0
+chr21	39045357	chr21:39045357:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:19:0,56,255	0/0:16,1:19:0,38,255	0/1:7,6:15:72,0,88
+chr21	39047035	chr21:39047035:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,20,0,0:32:255,0,87,255,153,255,255,180,255,255	1/2:1,14,11,0:27:255,171,243,229,0,255,255,189,255,255	0/3:10,2,3,7:23:161,173,255,87,200,224,0,147,149,255
+chr21	39049544	chr21:39049544:M	ACACACACACACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:24,0:27:0,80,255	0/1:15,3:23:50,0,255	0/1:17,9:28:180,0,255
+chr21	39052506	chr21:39052506:M	ACACATACACATATACACACACATACATACACACACA	<14.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,17:27:255,255,255,255,0,205	1/2:0,3,7:11:249,175,170,77,0,56	2/2:0,0,21:22:255,255,255,63,63,0
+chr21	39058140	chr21:39058140:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:25:113,0,187	1/1:1,21:23:255,50,0	0/1:18,8:29:64,0,254
+chr21	39060531	chr21:39060531:M	ACACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,12:33:225,0,255	1/1:0,26:27:255,78,0	0/1:21,5:28:54,0,255
+chr21	39060676	chr21:39060676:M	ACACACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,12:28:255,0,255	1/1:0,27:28:255,81,0	0/1:22,22:44:255,0,255
+chr21	39064037	chr21:39064037:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:255,0,255	1/1:0,30:36:255,95,0	0/1:7,10:18:221,0,137
+chr21	39064072	chr21:39064072:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:18,12:30:142,0,255	1/1:0,23:23:255,68,0	0/1:18,20:38:255,0,221
+chr21	39070888	chr21:39070888:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:2,48:50:255,109,0	1/1:0,35:35:255,103,0	1/1:0,41:41:255,121,0
+chr21	39081684	chr21:39081684:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:15:170,0,10	0/1:2,8:11:114,0,2	1/1:0,18:19:255,55,0
+chr21	39084771	chr21:39084771:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,4:8:154,59,47,68,0,47	0/2:2,0,1:3:8,14,64,0,33,25	0/2:1,0,4:5:54,57,83,0,17,3
+chr21	39086583	chr21:39086583:M	AAAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,99,0	0/1:5,19:25:255,0,73	0/1:9,18:29:255,0,173
+chr21	39092788	chr21:39092788:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,8:14:177,127,221,73,0,117	0/2:13,3,8:24:67,86,255,0,132,198	0/1:7,9,0:17:124,0,72,172,102,255
+chr21	39095165	chr21:39095165:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:123,0,115	0/1:6,4:13:49,0,76	0/0:17,1:21:0,43,255
+chr21	39102175	chr21:39102175:M	ACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,1,5,5:11:255,205,188,131,116,113,126,68,0,120	1/3:0,5,0,4:11:172,105,99,162,103,168,72,0,81,126	1/2:0,4,5,0:9:188,85,59,57,0,42,200,85,68,240
+chr21	39105744	chr21:39105744:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23:39:255,0,184	0/1:15,14:31:177,0,175	0/0:42,1:45:0,113,255
+chr21	39112639	chr21:39112639:M	AAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,7,0:25:62,0,234,125,255,255	0/1:19,10,0:31:81,0,255,170,255,255	1/2:2,11,16:31:255,255,255,159,0,236
+chr21	39119685	chr21:39119685:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:6:36,0,36	0/1:3,1:4:5,0,39	0/1:10,4:14:29,0,135
+chr21	39125067	chr21:39125067:M	GTGTGTGTGTGTGTGTGTGTGT	<14>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,16:31:255,255,255,255,0,255	1/2:0,15,16:32:255,255,255,255,0,255	1/2:0,18,12:33:255,255,255,255,0,255
+chr21	39125915	chr21:39125915:M	ACACACCAGACACACACACCACACTGACACACACACACACACACACACA	<21.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,7,7:14:255,133,195,211,0,190	1/2:1,4,7:12:206,108,214,103,0,98	1/2:2,8,5:16:255,57,133,203,0,219
+chr21	39127478	chr21:39127478:M	TTTTTTTTTTGTTTTGTTTTGTTTTTTTT	<30>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,13:21:255,255,255,71,0,131	1/2:0,7,8:17:255,200,188,109,0,155	0/2:10,0,5:18:104,139,255,0,191,255
+chr21	39132692	chr21:39132692:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:5:69,43,40,17,0,6	1/2:0,4,3:7:142,41,29,65,0,46	0/0:1,0,0:1:0,3,29,3,20,17
+chr21	39136482	chr21:39136482:M	ATATATATATATATATATATATAT	<10>,<11>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,13:29:255,208,160,255,0,212	1/2:2,19,11:33:255,131,122,255,0,255	0/1:13,18,1:33:255,0,255,255,227,255
+chr21	39139981	chr21:39139981:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:31:255,72,0	1/1:0,20:20:255,59,0	0/1:10,18:32:252,0,98
+chr21	39143087	chr21:39143087:M	CTTCCCCTTCACCTTC	<2.8>	.	.	Motif=CTTCAC	GT:AD:DP:PL	0/1:18,18:36:255,0,255	0/1:11,13:24:250,0,200	0/1:19,25:44:255,0,255
+chr21	39149578	chr21:39149578:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,16,20:37:255,255,255,255,0,194	1/2:1,19,14:34:255,194,162,255,0,240	2/2:2,0,26:29:255,255,255,38,82,0
+chr21	39158201	chr21:39158201:M	AAAAAAAAAAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:30:0,88,255	0/0:29,1:33:0,78,255	0/1:18,9:28:84,0,252
+chr21	39158396	chr21:39158396:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:49,3,0	0/1:3,6:11:77,0,18	1/1:0,1:1:16,3,0
+chr21	39158840	chr21:39158840:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:9,0,19	0/1:1,2:3:24,0,8	0/1:8,3:11:19,0,104
+chr21	39166413	chr21:39166413:M	TTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:14:255,32,0	1/1:0,4:9:154,17,0	0/0:0,0:3:0,1,3
+chr21	39185296	chr21:39185296:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:137,0,16	1/1:0,2:3:71,9,0	1/1:0,1:3:56,9,0
+chr21	39185709	chr21:39185709:M	AAAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,24:37:255,255,255,0,255,255	0/2:20,1,24:46:255,255,255,0,255,255	1/2:0,23,26:49:255,255,255,255,0,255
+chr21	39195743	chr21:39195743:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:40:255,0,224	0/1:18,21:42:255,0,209	0/1:17,21:41:255,0,193
+chr21	39207452	chr21:39207452:M	ACACACACACACACACACACACACACACACACA	<20.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:14,0,3:20:31,74,255,0,255,255	0/2:6,0,10:16:231,236,255,0,155,125	1/1:0,8,0:10:237,27,0,219,18,209
+chr21	39208979	chr21:39208979:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:38:0,83,255	0/0:27,1:31:0,70,255	0/1:22,9:36:80,0,255
+chr21	39214870	chr21:39214870:M	TTTTTTTTTCCTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:99,0,99	0/1:13,14:28:163,0,146	1/1:1,16:18:255,35,0
+chr21	39217011	chr21:39217011:M	ATATATATATATATATATATATATAAATATATATATATATTTATATATATATATATATATATATATATATATAT	<15.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,0:5:20,20,19,5,5,0	2/2:0,0,0:1:0,0,0,0,0,0	1/2:0,6,12:20:255,255,206,122,0,67
+chr21	39217084	chr21:39217084:M	TTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,7,58	0/0:0,0:1:0,2,4	1/1:0,12:14:255,39,0
+chr21	39221155	chr21:39221155:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,16,164	0/0:8,1:14:0,20,160	0/1:7,4:13:42,0,96
+chr21	39238286	chr21:39238286:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:17:76,0,111	0/1:12,12:29:160,0,120	1/1:2,16:22:255,26,0
+chr21	39240901	chr21:39240901:M	TTTTTTTTTTTGTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:28:0,82,255	0/0:33,1:34:0,82,255	0/1:13,8:22:85,0,177
+chr21	39244922	chr21:39244922:M	ATATATATATATATATATATATAT	<9>,<14>	.	.	Motif=AT	GT:AD:DP:PL	0/2:14,0,14:31:255,255,255,0,255,255	0/0:9,0,0:11:0,30,255,30,255,255	1/2:0,13,4:18:255,105,66,255,0,255
+chr21	39245590	chr21:39245590:M	TTTTTTTTTTGGTTTTTTTTTTTTTTT	<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,4,11:23:174,96,255,0,61,70	0/2:19,1,12:32:124,156,255,0,255,233	1/2:0,10,11:21:255,163,133,174,0,115
+chr21	39248642	chr21:39248642:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>,<26>,<34>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6,0:10:245,155,143,90,0,72,245,155,90,245	1/2:0,1,2,0:6:102,64,59,37,0,28,102,64,37,102	2/3:0,0,3,3:8:173,173,173,87,87,76,86,86,0,74
+chr21	39249916	chr21:39249916:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>,<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,17,0,0:31:255,0,255,255,255,255,255,225,255,255	0/2:9,0,22,1:36:255,255,255,0,255,216,255,255,129,255	1/3:0,9,1,9:22:255,162,223,255,238,255,255,0,148,248
+chr21	39252250	chr21:39252250:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:10:0,2,197	0/1:13,3:16:31,0,255	0/1:8,4:13:70,0,182
+chr21	39257203	chr21:39257203:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:26:0,50,255	0/0:21,3:26:0,21,255	0/1:12,14:28:176,0,140
+chr21	39264429	chr21:39264429:M	AAAAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:16,0,9:26:95,158,255,0,255,210	0/2:16,0,6:24:54,101,255,0,255,202	1/2:0,18,12:36:255,211,241,255,0,255
+chr21	39268443	chr21:39268443:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8:15:109,0,55	0/1:7,16:24:211,0,48	0/1:7,14:24:204,0,53
+chr21	39272009	chr21:39272009:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7,0:20:69,0,180,108,235,255	0/1:8,5,0:15:43,0,115,73,151,255	1/2:3,6,4:14:116,9,34,29,0,102
+chr21	39272310	chr21:39272310:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,12:18:140,0,44	0/1:12,10:22:91,0,121	1/1:0,13:14:194,29,0
+chr21	39274298	chr21:39274298:M	AGAGAGCGAGAGAGAGAGAGAGAGAGAGA	<13.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:26,2:28:0,45,255	0/0:30,3:33:0,44,255	0/1:20,13:34:138,0,255
+chr21	39279639	chr21:39279639:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAA	<27>,<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0,0:7:0,21,178,20,130,114	0/2:6,0,3:9:23,49,224,0,98,73	0/1:1,6,1:9:145,0,15,134,0,145
+chr21	39286017	chr21:39286017:M	TTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:12:0,33,255	0/0:13,0:19:0,53,255	1/1:0,5:6:140,15,0
+chr21	39290491	chr21:39290491:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:13:0,20,186	0/1:12,7:19:63,0,149	0/1:10,2:13:6,0,138
+chr21	39292114	chr21:39292114:M	GTGGGGGGTGGGTGGG	<1.5>	.	.	Motif=GTGG	GT:AD:DP:PL	0/1:2,1:3:17,0,44	0/1:1,3:4:67,0,15	1/1:0,1:1:28,3,0
+chr21	39294655	chr21:39294655:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,1:16:0,29,241	0/0:16,1:19:0,36,255	0/1:13,7:20:63,0,169
+chr21	39299248	chr21:39299248:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,17:37:167,0,213	0/1:16,16:32:157,0,155	1/1:4,39:44:255,49,0
+chr21	39299260	chr21:39299260:M	ATATATATATAT	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:21,7:31:0,12,55	0/0:22,10:32:0,9,50	1/1:0,25:30:129,49,0
+chr21	39299813	chr21:39299813:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,21:38:255,0,203	0/1:20,14:34:146,0,250	1/1:0,31:33:255,96,0
+chr21	39301894	chr21:39301894:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,3:35:0,47,255	0/0:27,0:30:0,84,255	0/1:25,17:42:182,0,255
+chr21	39302755	chr21:39302755:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:11:89,0,25	0/1:4,10:18:150,0,27	1/1:2,8:13:139,2,0
+chr21	39303520	chr21:39303520:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7:8:103,6,0	0/1:7,2:10:8,0,88	0/1:2,2:7:19,0,32
+chr21	39303823	chr21:39303823:M	AAAAAAAAAAAGAAAAAGAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:33,0:34:0,99,255	0/1:8,10:18:129,0,93
+chr21	39304142	chr21:39304142:M	AAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:18:255,0,50	0/1:2,11:15:254,0,21	1/1:0,17:21:255,56,0
+chr21	39304958	chr21:39304958:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:70,0,16	0/0:3,0:5:0,9,83	0/1:2,1:3:18,0,48
+chr21	39305861	chr21:39305861:M	AAAAAGAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,124	0/1:10,6:16:54,0,123	1/1:2,11:14:164,6,0
+chr21	39308482	chr21:39308482:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,5:9:62,74,177,0,70,45	0/2:3,1,2:7:25,12,89,0,39,39	1/2:0,10,3:14:255,44,11,178,0,143
+chr21	39309289	chr21:39309289:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,14:23:195,0,102	0/1:13,13:26:154,0,155	0/1:12,14:26:181,0,144
+chr21	39309825	chr21:39309825:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:58,0,58	0/1:1,2:4:34,0,5	0/1:6,3:13:25,0,97
+chr21	39310604	chr21:39310604:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,17:48:114,0,255	0/1:18,13:33:95,0,166	0/1:24,24:50:209,0,205
+chr21	39310614	chr21:39310614:M	ATTATTATTATT	<3.7>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:31,3:35:0,59,255	0/0:22,3:25:0,32,232	1/1:0,5:6:57,11,0
+chr21	39313590	chr21:39313590:M	CGCCGCCGCCGCCGCCGCCGCCGCC	<7.3>,<9.3>	.	.	Motif=CGC	GT:AD:DP:PL	0/2:10,0,12:22:163,223,255,0,161,125	0/2:7,0,11:18:144,193,255,0,106,73	1/2:0,8,6:14:217,106,120,144,0,184
+chr21	39315748	chr21:39315748:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:20:109,0,147	0/1:16,18:34:219,0,183	1/1:0,45:46:255,135,0
+chr21	39320668	chr21:39320668:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:11:49,0,75	0/1:5,2:8:20,0,62	0/1:2,5:8:74,0,12
+chr21	39321449	chr21:39321449:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,8:25:87,0,208	0/1:15,6:24:47,0,213	1/1:2,20:23:255,31,0
+chr21	39325277	chr21:39325277:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:10:131,11,0	0/1:2,7:9:91,0,7	1/1:3,20:26:255,23,0
+chr21	39327502	chr21:39327502:M	TTTTTTTTGTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:29:255,0,224	0/1:23,18:42:255,0,255	1/1:0,49:51:255,152,0
+chr21	39327906	chr21:39327906:M	AATAAATAAATAAATAAATGAATAAATAAATAAATAAATAAAATTAAATAAA	<12>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:7,1:8:0,4,115	0/0:8,0:8:0,24,145	1/1:0,18:18:255,53,0
+chr21	39328192	chr21:39328192:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,13:29:159,0,216	0/1:8,13:21:170,0,81	1/1:0,35:36:255,106,0
+chr21	39329517	chr21:39329517:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:12:71,0,70	0/1:9,6:17:71,0,102	1/1:1,12:14:199,23,0
+chr21	39329854	chr21:39329854:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:16:138,0,64	0/1:13,6:19:49,0,172	1/1:0,16:17:255,50,0
+chr21	39330931	chr21:39330931:M	AATAATAATAATAATA	<6.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:21,11:32:207,0,255	0/1:10,10:22:212,0,206	1/1:0,43:46:255,134,0
+chr21	39331427	chr21:39331427:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:11:23,0,69	0/1:6,3:10:20,0,66	1/1:0,5:5:78,14,0
+chr21	39333390	chr21:39333390:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:16:64,0,133	0/0:10,2:13:0,3,154	1/1:2,13:16:215,12,0
+chr21	39337021	chr21:39337021:M	TTTTTTCTTTTCTTTTCTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,15:41:145,0,255	0/1:11,10:23:111,0,129	1/1:1,19:21:255,44,0
+chr21	39344257	chr21:39344257:M	AAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:18:255,15,0	1/1:0,7:10:203,20,0	1/1:0,32:34:255,101,0
+chr21	39345110	chr21:39345110:M	CACACACACACACACACACACACACACAC	<12.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,15:30:255,0,255	0/1:14,7:21:127,0,255	1/1:0,29:31:255,92,0
+chr21	39356284	chr21:39356284:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:24:147,0,148	0/1:17,7:24:50,0,223	0/0:15,3:21:0,7,242
+chr21	39370422	chr21:39370422:M	ACACACACACACACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:8,7:17:120,0,144	0/1:17,6:25:71,0,255	0/1:21,12:37:181,0,255
+chr21	39371147	chr21:39371147:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:16:79,0,116	0/1:15,6:22:49,0,193	1/1:3,25:31:255,33,0
+chr21	39374892	chr21:39374892:M	TCCCCTCCCCTCCACTTCTGTCCCCTCCCCTGCCCTCCACTTCCCTTTCCCCTCCCC	<11.6>	.	.	Motif=TCCCC	GT:AD:DP:PL	0/0:9,1:10:0,12,33	0/0:8,1:10:0,8,25	0/1:5,4:10:2,0,6
+chr21	39376103	chr21:39376103:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:40,0,5	.	0/0:1,0:1:0,3,17
+chr21	39384565	chr21:39384565:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,24:28:255,24,0	1/1:1,16:18:255,35,0	1/1:0,22:23:255,67,0
+chr21	39386850	chr21:39386850:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,61,0	1/1:0,34:36:255,97,0	1/1:2,26:29:255,49,0
+chr21	39395369	chr21:39395369:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,110,0	1/1:0,34:35:255,103,0	1/1:0,32:35:255,102,0
+chr21	39396686	chr21:39396686:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:179,29,0	1/1:2,11:15:173,9,0	1/1:0,3:4:63,11,0
+chr21	39403616	chr21:39403616:M	TATTTTTATTTTTATTTTTTTTTT	<3.8>	.	.	Motif=TATTTT	GT:AD:DP:PL	1/1:0,23:23:255,69,0	1/1:0,24:25:255,73,0	1/1:0,26:26:255,78,0
+chr21	39404751	chr21:39404751:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:86,15,0	1/1:1,4:6:58,1,0	1/1:0,2:2:34,6,0
+chr21	39414707	chr21:39414707:M	TCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,15:20:245,54,0	0/1:7,8:19:84,0,49	1/1:0,18:21:255,57,0
+chr21	39414743	chr21:39414743:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<24>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,10,6:17:255,72,22,125,0,78	1/2:0,7,5:13:255,59,21,88,0,53	1/2:0,4,10:15:255,116,72,57,0,15
+chr21	39419524	chr21:39419524:M	AAAAAAAAAAAAGAAAAAAGAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,17:24:214,0,4	1/1:0,22:22:255,64,0	1/1:1,28:31:255,68,0
+chr21	39428579	chr21:39428579:M	TATATATATATATATATATAT	<8>,<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,2:6:70,20,38,48,0,39	1/2:0,3,5:8:119,50,98,70,0,51	0/0:0,0,0:3:0,0,0,0,0,0
+chr21	39433928	chr21:39433928:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:9:116,8,0	0/1:1,2:4:32,0,5	0/1:2,6:9:78,0,19
+chr21	39446168	chr21:39446168:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:36:255,106,0	1/1:0,42:45:255,134,0	1/1:0,33:35:255,104,0
+chr21	39447417	chr21:39447417:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:15:40,0,84	0/0:4,0:6:0,12,60	0/0:4,0:6:0,14,76
+chr21	39473885	chr21:39473885:M	AAAAAAAAAAACAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:28:255,81,0	1/1:0,22:23:255,68,0	1/1:2,30:33:255,44,0
+chr21	39474891	chr21:39474891:M	GTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:2,40:42:255,86,0	1/1:0,33:33:255,97,0	1/1:2,31:33:255,60,0
+chr21	39485682	chr21:39485682:M	TTTTCTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:11:188,32,0	0/1:3,7:11:95,0,19	1/1:0,13:13:227,38,0
+chr21	39490740	chr21:39490740:M	TTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:36:255,104,0	1/1:0,40:44:255,130,0	1/1:0,45:45:255,135,0
+chr21	39491159	chr21:39491159:M	TTTATTTATTTATTTATTTATTTTATTTTTTATTT	<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,26:42:117,4,0	0/1:0,17:32:64,0,18	1/1:0,30:44:161,23,0
+chr21	39492467	chr21:39492467:M	TATATATATATATATA	<4>,<7>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,3:5:73,34,64,47,0,38	1/2:0,3,9:12:146,99,203,69,0,44	1/2:0,6,3:9:168,33,54,141,0,131
+chr21	39492482	chr21:39492482:M	ACACACACACACACACACCACA	<10>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,28:30:255,83,0	1/1:1,27:32:255,76,0	1/1:0,37:38:255,105,0
+chr21	39494223	chr21:39494223:M	TCTTCTTCCTCTTCTTCTTCTTCTTCTTCTT	<8.3>,<9.3>	.	.	Motif=TCT	GT:AD:DP:PL	2/2:0,1,39:44:255,255,255,119,63,0	2/2:0,1,29:34:255,255,255,91,36,0	1/2:0,19,21:49:255,209,129,255,0,176
+chr21	39494252	chr21:39494252:M	TTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:42:255,114,0	1/1:0,28:32:255,84,0	1/1:0,35:41:255,105,0
+chr21	39496507	chr21:39496507:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:11:239,27,0	1/1:0,4:7:163,21,0	1/1:0,6:8:193,21,0
+chr21	39499247	chr21:39499247:M	CTATCTATCATCTGTCTATCTGTCTATCTATCTAT	<11.8>,<14.8>	.	.	Motif=CTAT	GT:AD:DP:PL	1/2:0,11,14:28:255,255,255,255,0,226	2/2:0,0,15:18:255,255,255,48,35,0	1/2:0,15,8:24:255,198,154,255,0,255
+chr21	39502986	chr21:39502986:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:30:255,78,0	1/1:0,29:29:255,85,0	1/1:1,29:31:255,64,0
+chr21	39509472	chr21:39509472:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:14:255,39,0	1/1:0,7:9:255,27,0	1/1:0,9:11:255,30,0
+chr21	39515693	chr21:39515693:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,51:51:255,150,0	1/1:1,56:57:255,150,0
+chr21	39532565	chr21:39532565:M	AAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:231,6,0	1/1:1,11:13:255,13,0	1/1:0,15:16:255,45,0
+chr21	39533114	chr21:39533114:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:27:106,0,218	0/1:11,10:23:111,0,138	1/1:1,24:25:255,55,0
+chr21	39533987	chr21:39533987:M	ATTTTTTATTTTTTATTTTATTTATTTTAATTTTATTTATTT	<11.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,5:16:42,0,99	0/1:5,3:8:19,0,47	1/1:0,8:9:115,23,0
+chr21	39537149	chr21:39537149:M	GAGAGAGAGAGAGAGAGAGA	<12>	.	.	Motif=GA	GT:AD:DP:PL	0/1:21,21:44:255,0,255	0/1:22,13:36:247,0,255	1/1:0,34:34:255,102,0
+chr21	39541684	chr21:39541684:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,16:28:223,0,147	0/1:19,22:41:255,0,222	1/1:0,50:50:255,148,0
+chr21	39541723	chr21:39541723:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:25:181,0,130	0/1:11,10:23:127,0,135	1/1:4,29:34:255,28,0
+chr21	39541891	chr21:39541891:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:25:181,0,255	0/1:11,2:15:15,0,255	1/1:1,18:19:255,29,0
+chr21	39549254	chr21:39549254:M	AAAAAAAAAAAATAATAAAACAAGAAAACAAACAAACAAAAAAA	<48>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,9:20:180,0,196	0/1:15,6:22:95,0,255	1/1:0,15:16:255,47,0
+chr21	39550241	chr21:39550241:M	TTTTTTTTTAATTTTATTTTA	<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:15,15:31:255,0,255	0/1:9,14:23:255,0,176	1/1:0,34:35:255,104,0
+chr21	39554938	chr21:39554938:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:3:81,9,0,67,9,60	1/1:0,1,0:1:28,3,0,22,3,20	1/2:0,1,5:6:142,95,82,20,0,3
+chr21	39554968	chr21:39554968:M	ATATATATATATATATATATATAAAATATATATATATATATAAAATATATATATATATATATTTTATATATATATATATATATA	<9>,<9.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,4,0,3:7:186,57,37,65,34,44,76,0,24,56	1/3:0,1,0,2:3:72,35,28,31,23,23,19,0,6,10	2/3:0,1,7,7:18:255,152,103,94,55,42,126,18,0,80
+chr21	39555174	chr21:39555174:M	TTTTTCTTTCTTTTTCTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,10:13:255,0,47	0/1:2,6:9:171,0,28	1/1:0,19:19:255,57,0
+chr21	39555355	chr21:39555355:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:26:255,0,231	0/1:5,12:18:255,0,83	1/1:0,32:35:255,99,0
+chr21	39561125	chr21:39561125:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,17:29:234,0,139	0/1:18,22:41:255,0,209	1/1:0,43:43:255,127,0
+chr21	39565197	chr21:39565197:M	TTTTTTTTTTTTTCTTTTTCTTTTT	<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,9,0:14:225,0,104,237,92,255	0/1:8,13,0:24:255,0,171,255,145,255	1/2:1,15,18:36:255,255,255,255,0,255
+chr21	39565386	chr21:39565386:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGT	<25.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:4,1,7:14:130,67,172,0,98,80	0/2:7,3,7:19:148,43,218,0,138,130	1/2:0,5,14:20:255,162,107,72,0,14
+chr21	39565610	chr21:39565610:M	TTTTTTTTTCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:17:26,0,170	0/1:12,2:16:12,0,161	1/1:1,5:8:84,3,0
+chr21	39568414	chr21:39568414:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:14:133,0,146	0/1:6,11:21:239,0,134	1/1:0,9:10:251,29,0
+chr21	39570292	chr21:39570292:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:39:255,0,255	0/1:22,25:50:255,0,255	1/1:0,38:40:255,119,0
+chr21	39571324	chr21:39571324:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,10,10:21:255,159,221,159,0,215	1/2:1,7,7:15:179,102,152,102,0,150	1/1:0,33,0:35:255,100,0,255,102,255
+chr21	39573635	chr21:39573635:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,10:19:255,174,121,133,0,103	0/1:10,10,0:21:107,0,119,140,176,255	0/2:5,2,13:22:255,192,239,0,72,104
+chr21	39575782	chr21:39575782:M	ACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:18,16:36:255,0,255	0/1:8,13:23:243,0,125	0/1:22,9:32:119,0,255
+chr21	39584122	chr21:39584122:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:12:74,0,185	0/1:5,4:9:81,0,109	1/1:0,13:13:255,39,0
+chr21	39589605	chr21:39589605:M	AAAAAAAATAAATAAATAAATAAAATAAAAAAAAAAAAAAACAAAAAA	<46>,<47>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,7:19:255,110,74,219,0,167	1/2:0,6,4:10:208,59,41,103,0,76	1/1:0,18,0:19:255,57,0,255,56,255
+chr21	39591584	chr21:39591584:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,16:33:205,0,214	0/1:17,16:34:195,0,203	0/0:35,1:37:0,82,255
+chr21	39624852	chr21:39624852:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,19:38:248,0,249	0/1:19,21:41:255,0,220	0/0:29,0:29:0,86,255
+chr21	39642874	chr21:39642874:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:17:255,32,0	0/1:1,7:9:93,0,2	0/0:6,0:7:0,20,116
+chr21	39643052	chr21:39643052:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:29:190,0,172	0/1:20,11:32:108,0,254	0/0:35,3:38:0,58,255
+chr21	39643418	chr21:39643418:M	AAAAAAAAAAAAAAAAGAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:66,0,92	0/1:12,8:22:87,0,139	0/0:18,0:19:0,53,255
+chr21	39657655	chr21:39657655:M	ATCTATCTGTCTGTCTATCTATCTATCTGTCTA	<7.2>	.	.	Motif=ATCT	GT:AD:DP:PL	1/1:0,32:32:255,95,0	0/1:16,11:27:118,0,208	1/1:0,37:37:255,109,0
+chr21	39670212	chr21:39670212:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,16:31:206,0,188	0/0:31,0:34:0,98,255	0/1:16,16:33:193,0,202
+chr21	39677481	chr21:39677481:M	TGTTTTTTGTTTGTTTGTTTGTTT	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:18,11:29:113,0,241	0/1:20,15:35:178,0,255
+chr21	39679809	chr21:39679809:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<25>	.	.	Motif=GA	GT:AD:DP:PL	0/1:1,0:2:9,0,20	1/1:0,1:1:28,3,0	1/1:0,6:13:244,34,0
+chr21	39682187	chr21:39682187:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:28:0,76,255	0/1:16,14:34:165,0,199	0/1:18,10:29:92,0,246
+chr21	39682705	chr21:39682705:M	AAACAAACAAACAAACAAACAAACAAACA	<6.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:13,20:33:255,0,139	0/1:19,15:34:182,0,255
+chr21	39689801	chr21:39689801:M	TATATATATATATATATATATATATATATATATATA	<16>,<19>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,11,4:16:255,45,79,253,0,255	2/2:0,0,2:2:29,35,57,6,6,0	0/1:3,4,1:9:83,0,68,85,29,124
+chr21	39691888	chr21:39691888:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:14:14,0,151	1/1:2,12:14:172,7,0	0/1:10,4:16:45,0,130
+chr21	39697558	chr21:39697558:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:23,0,7	0/1:4,3:8:23,0,48	0/0:5,1:6:0,2,63
+chr21	39700601	chr21:39700601:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:44:0,129,255	0/1:20,21:43:247,0,250	0/1:22,21:44:255,0,255
+chr21	39700938	chr21:39700938:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/1:13,6:22:41,0,179	0/0:17,3:20:0,6,245
+chr21	39701615	chr21:39701615:M	AAAAAAAAAAAGAAAGAAAAAAAAGAAAAGAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,3:31:0,35,255	0/1:11,13:24:159,0,124	0/1:13,10:23:114,0,169
+chr21	39705825	chr21:39705825:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,1:9:1,0,89	0/1:8,8:19:111,0,77	0/1:2,4:6:50,0,16
+chr21	39715037	chr21:39715037:M	CCTTTCCTTTCCTTTTCTTTCTTTC	<4>	.	.	Motif=CCTTT	GT:AD:DP:PL	0/0:30,0:30:0,86,255	0/1:23,20:43:177,0,216	0/1:17,22:42:229,0,140
+chr21	39715050	chr21:39715050:M	TTTCTTTCTTTCGTTCTTTCTTTCTTTTCTTTCTTTCTCATCTCCCTTCCCTTCTCTTCCTTTCTTTCTTTTCTTTTCTTTCTTT	<20>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:9,0:10:0,26,145	0/1:3,2:6:25,0,31	0/1:2,5:10:68,0,9
+chr21	39721674	chr21:39721674:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<10.5>,<12.5>	.	.	Motif=CCTT	GT:AD:DP:PL	0/2:8,0,4:12:40,74,255,0,148,115	0/1:8,11,0:19:255,0,181,255,140,255	1/2:0,10,6:16:255,108,126,255,0,242
+chr21	39724068	chr21:39724068:M	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	<9>,<10>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,7,2:9:240,37,10,126,0,101	1/2:0,13,9:22:255,168,105,243,0,181
+chr21	39734423	chr21:39734423:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,7:13:160,63,125,86,0,66	1/2:2,4,5:11:105,31,102,55,0,49	0/2:10,2,4:18:12,7,255,0,76,70
+chr21	39734440	chr21:39734440:M	ACACACACACACACACACACACACACACACACACAC	<17>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/0:19,3,0:22:0,25,185,66,249,255	0/1:13,5,0:19:8,0,98,48,137,255	0/2:6,0,11:21:255,255,255,0,69,96
+chr21	39736044	chr21:39736044:M	CTCACTCTCACT	<1.8>	.	.	Motif=CTCACT	GT:AD:DP:PL	0/0:35,0:36:0,105,255	0/1:13,19:32:255,0,242	0/0:39,0:39:0,117,255
+chr21	39745057	chr21:39745057:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,18:33:255,255,246,255,0,189	0/1:27,23,1:52:255,0,255,255,255,255	2/2:1,2,43:46:255,255,255,117,98,0
+chr21	39747941	chr21:39747941:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:36:0,87,255	0/1:21,14:36:138,0,255	0/0:19,0:21:0,61,255
+chr21	39749214	chr21:39749214:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:25:255,65,0	0/1:11,7:21:134,0,247	1/1:0,29:30:255,87,0
+chr21	39750511	chr21:39750511:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:129,15,0	0/1:14,1:21:14,0,255	1/1:0,7:10:211,24,0
+chr21	39753742	chr21:39753742:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:43:255,127,0	0/1:15,25:40:255,0,154	1/1:0,56:56:255,165,0
+chr21	39753921	chr21:39753921:M	TTTTTTTGTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	0/1:23,18:41:203,0,255	1/1:0,48:49:255,144,0
+chr21	39755587	chr21:39755587:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:16:62,0,136	0/1:11,11:22:126,0,127	0/1:20,4:27:2,0,255
+chr21	39756090	chr21:39756090:M	CAAACAAACAAACAAACAAACAAACAAACAAAC	<5.2>,<6.2>,<7.2>	.	.	Motif=CAAA	GT:AD:DP:PL	1/2:0,16,15,0:31:255,255,203,255,0,223,255,251,255,255	2/3:0,0,21,12:33:255,255,255,187,218,124,255,255,0,255	1/1:0,37,0,0:37:255,111,0,255,109,255,255,111,255,255
+chr21	39757580	chr21:39757580:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:18,0,124	0/0:15,3:18:0,2,202	0/1:12,4:18:27,0,166
+chr21	39760579	chr21:39760579:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:11,13:25:168,0,122	1/1:0,39:40:255,117,0
+chr21	39773473	chr21:39773473:M	CTTTTCTTTTTTTTTC	<5.6>	.	.	Motif=CTTTT	GT:AD:DP:PL	1/1:0,32:33:255,98,0	0/1:13,17:31:255,0,255	1/1:0,43:44:255,132,0
+chr21	39787553	chr21:39787553:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:10:118,13,0	0/1:2,5:7:57,0,11	1/1:0,12:12:189,35,0
+chr21	39797219	chr21:39797219:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	0/1:2,6:8:79,0,11	0/1:2,7:14:118,0,15
+chr21	39803224	chr21:39803224:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:26:0,40,255	0/1:9,12:23:150,0,99	0/0:39,1:41:0,102,255
+chr21	39806269	chr21:39806269:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20,0:22:255,29,0,255,64,255	1/2:0,9,10:19:255,168,115,128,0,98	1/1:0,14,0:14:246,41,0,246,41,246
+chr21	39807319	chr21:39807319:M	CACACACACACACACACACACACACACACACACACACGCACACACAC	<19.5>,<21.5>,<25.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,13,0,6,0:21:255,164,137,255,178,255,255,0,255,255,255,116,255,255,255	1/2:0,14,8,0,0:22:255,210,168,255,0,255,255,217,255,255,255,217,255,255,255	3/4:0,0,0,7,4:14:255,255,255,255,255,255,62,70,70,29,121,152,152,0,119
+chr21	39809977	chr21:39809977:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:62,11,0	0/1:1,1:2:11,0,11	0/1:4,6:10:72,0,38
+chr21	39816411	chr21:39816411:M	GAGAGACAGAGAGAGAGAGGAGAG	<14.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:13,12:27:203,0,228	0/1:10,7:19:110,0,176	1/1:1,26:28:255,49,0
+chr21	39816429	chr21:39816429:M	GGAGAGGAGGGGAGGGGAGGGAAGGG	<6.2>	.	.	Motif=GGAGG	GT:AD:DP:PL	0/1:13,17:30:224,0,150	0/1:14,7:21:60,0,181	1/1:0,28:29:255,83,0
+chr21	39820810	chr21:39820810:M	TTATTTTATTTTATTTTTTTT	<4>	.	.	Motif=TTATT	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,27:27:255,81,0	1/1:0,29:29:255,87,0
+chr21	39823963	chr21:39823963:M	TATTTATTTATTTATTTATTTATTTATTTATT	<12>,<13>	.	.	Motif=TATT	GT:AD:DP:PL	0/2:6,0,11:17:255,210,255,0,160,128	0/1:14,8,0:22:172,0,255,144,255,255	2/2:0,0,15:15:255,255,255,45,44,0
+chr21	39826429	chr21:39826429:M	TATATATATATTTATCATATATGTATGACATATATATATA	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/1:14,11:26:184,0,255	0/1:17,8:25:111,0,255	0/0:36,0:36:0,108,255
+chr21	39827940	chr21:39827940:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,28:53:255,0,255	0/1:16,15:32:171,0,198	0/0:28,1:31:0,72,255
+chr21	39830454	chr21:39830454:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,26:54:255,0,255	0/1:20,23:44:255,0,235	0/0:46,2:48:0,105,255
+chr21	39834719	chr21:39834719:M	AGAGGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGCGAGAGAG	<15.5>,<38.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,15,6:23:255,174,129,255,0,255	1/1:0,13,0:19:255,17,0,255,42,255	2/2:0,0,1:5:61,61,61,9,9,0
+chr21	39837403	chr21:39837403:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:31,26:57:255,0,255	0/1:21,14:35:255,0,255	0/0:48,0:48:0,144,255
+chr21	39844867	chr21:39844867:M	AAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,5:15:113,138,222,0,88,119	0/1:5,4,0:11:38,0,42,64,69,215	0/2:2,1,10:14:215,222,255,0,17,27
+chr21	39853719	chr21:39853719:M	TTTTTTTCTTTTCTTTTGTTTTTTTCTTCTTCTTTTTTTTTTTTTTTTT	<47>,<48>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,3:8:32,46,147,0,76,58	0/0:5,0,0:5:0,15,136,15,99,86	1/2:1,8,3:12:224,28,29,123,0,108
+chr21	39867169	chr21:39867169:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:26:135,0,178	0/1:12,8:24:94,0,152	1/1:1,30:32:255,76,0
+chr21	39874662	chr21:39874662:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:46:255,134,0	1/1:0,38:40:255,114,0	1/1:0,32:35:255,99,0
+chr21	39878003	chr21:39878003:M	GAGAGAGAGAGAGAGA	<9>	.	.	Motif=GA	GT:AD:DP:PL	0/1:16,17:33:224,0,208	0/1:22,24:46:255,0,255	0/0:42,0:42:0,124,255
+chr21	39878973	chr21:39878973:M	TTTTCTTTTCTTTCCTTTTTCTTTTTTTTTTTT	<6.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:26,0:29:0,83,255	0/1:6,10:16:155,0,73	0/0:27,1:29:0,63,255
+chr21	39884801	chr21:39884801:M	AGAGAGAGAGAGAGAGAGAGAGACAGAGA	<16.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:12,15:30:255,0,255	0/1:11,11:26:255,0,235	0/0:24,0:26:0,77,255
+chr21	39887339	chr21:39887339:M	TTTTTTTTTGTTTTTTGGTTTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,14,2:29:178,0,135,169,180,255	0/2:15,0,13:29:255,219,255,0,243,255	1/1:4,25,0:29:255,17,0,255,84,255
+chr21	39889412	chr21:39889412:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,4:9:240,69,43,86,0,61	1/2:0,2,2:5:92,24,22,24,0,21	1/2:0,5,3:8:215,51,28,85,0,62
+chr21	39890523	chr21:39890523:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,11:26:255,203,235,255,0,255	0/1:20,18,0:39:220,0,244,255,255,255	1/2:0,8,14:22:255,253,255,145,0,168
+chr21	39897386	chr21:39897386:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:12:0,17,171	0/1:5,5:10:55,0,55	0/0:9,0:11:0,32,176
+chr21	39903868	chr21:39903868:M	AAAAAAAACAAAAAAAAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,53,0	1/1:1,15:16:231,30,0	0/1:1,1:2:11,0,11
+chr21	39905254	chr21:39905254:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,23,0:50:255,0,255,255,255,255	1/2:0,22,17:40:255,255,255,255,0,255	0/0:44,0,0:44:0,130,255,130,255,255
+chr21	39907797	chr21:39907797:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,19:32:255,0,148	0/0:40,1:41:0,103,255	0/1:11,21:32:255,0,106
+chr21	39912313	chr21:39912313:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:33:123,0,255	0/0:26,3:33:0,43,255	0/1:23,12:35:112,0,255
+chr21	39914574	chr21:39914574:M	AAAAAAAAAAAAAAGAAAAAAAAAA	<28>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8,1:9:245,27,0,147,9,122	1/2:0,1,3:6:125,50,33,36,0,24	1/1:0,3,0:5:111,14,0,82,14,74
+chr21	39915230	chr21:39915230:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,232	0/1:22,10:32:83,0,255	0/1:26,14:42:143,0,255
+chr21	39932406	chr21:39932406:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,23,14:37:255,249,144,255,0,255	0/1:18,18,1:38:210,0,210,241,255,255	2/2:0,0,35:37:255,255,255,111,108,0
+chr21	39933640	chr21:39933640:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,14:16:207,13,0	1/1:1,8:9:115,10,0	1/1:0,20:21:255,61,0
+chr21	39942651	chr21:39942651:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:24:255,52,0	0/1:6,13:23:186,0,46	0/1:14,7:22:67,0,178
+chr21	39955558	chr21:39955558:M	TTTTTTTTTTGTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/0:25,0:25:0,75,255	0/1:10,18:29:255,0,189
+chr21	39956182	chr21:39956182:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1,0:40:0,99,255,117,255,255	0/1:16,15,0:32:173,0,202,224,255,255	0/2:23,2,22:49:255,255,255,0,255,255
+chr21	39962325	chr21:39962325:M	CTTTTCTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:2,6:14:49,0,96	0/1:4,4:8:36,0,91	0/1:1,8:9:93,0,3
+chr21	39965557	chr21:39965557:M	CACACACAAGCACACACATGCACACACACACACACACAC	<18.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:25,1,0:26:0,58,255,78,255,255	0/2:7,1,18:26:255,255,255,0,106,135	0/1:13,19,0:35:255,0,156,255,241,255
+chr21	39971360	chr21:39971360:M	AAAAATAAAAAT	<1.8>	.	.	Motif=AAAAAT	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,37:39:255,113,0	1/1:0,34:36:255,105,0
+chr21	39971606	chr21:39971606:M	TTCTTTTCTTTTTTTT	<3.4>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:24,23:47:255,0,255	0/0:50,0:50:0,150,255	0/1:21,19:40:255,0,255
+chr21	39973795	chr21:39973795:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<20.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	2/4:0,0,13,0,9:22:255,255,255,254,255,222,255,255,160,255,255,255,0,255,255	1/2:0,18,12,0,0:31:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255	3/4:2,0,0,6,12:20:255,255,255,255,255,255,174,211,211,153,54,127,126,0,72
+chr21	39977704	chr21:39977704:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:202,0,201	0/1:9,10:19:119,0,102	1/1:2,25:28:255,46,0
+chr21	39983863	chr21:39983863:M	TCCCTCCCTCCCTCCCTCCCTCCCT	<7.2>,<8.2>	.	.	Motif=TCCC	GT:AD:DP:PL	1/2:0,9,4:13:184,53,17,95,0,83	1/2:1,6,3:11:98,13,8,36,0,73	1/1:1,16,3:22:210,22,0,149,22,208
+chr21	39984743	chr21:39984743:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<16>,<18>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,5,10,0:16:255,255,255,74,0,112,255,255,143,255	1/3:0,5,0,11:21:255,255,255,255,255,255,96,0,124,102	2/2:0,0,14,0:15:255,255,255,45,42,0,255,255,45,255
+chr21	39985947	chr21:39985947:M	CACACTACACACACACACTCACATATAACACAAACACACACCAAACACACAC	<25>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,6:15:72,0,126	0/1:7,8:15:100,0,81	1/1:0,9:9:168,27,0
+chr21	39986238	chr21:39986238:M	CACACACACACACACACACACACACACACACACACAC	<15.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,10,0:16:255,0,130,155,151,255	0/2:7,1,7:19:185,117,255,0,160,134	1/1:0,20,0:21:255,63,0,255,61,255
+chr21	39993395	chr21:39993395:M	TTTTATTTTACTTTTTTTTTTTT	<4.4>,<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/2:8,0,14:22:220,255,255,0,140,98	1/2:0,20,18:41:255,255,255,255,0,255	0/1:15,16,0:31:234,0,214,255,255,255
+chr21	40003928	chr21:40003928:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:43,0,73	1/1:0,1:4:26,2,0	1/1:0,8:9:229,24,0
+chr21	40005205	chr21:40005205:M	AAAAAAAAAAAAAAAAAAAAAAACCAAAAAACAAAAAAAAAAAA	<45>,<46>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,1:3:50,16,8,28,0,25	1/2:0,3,4:7:133,64,45,41,0,29	0/1:1,2,0:3:25,0,8,28,16,51
+chr21	40012908	chr21:40012908:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,24:25:255,255,255,75,74,0	2/2:0,3,27:33:255,255,255,89,43,0	1/2:2,17,16:35:255,251,188,224,0,227
+chr21	40015418	chr21:40015418:M	TTTTTTTTTTTTTTCTTTTTT	<19>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,4:23:255,103,47,255,0,255	1/2:0,18,13:34:255,255,255,255,0,255	1/1:0,30,0:32:255,90,0,255,93,255
+chr21	40017565	chr21:40017565:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:30:255,85,0	1/1:0,21:21:255,62,0	0/1:12,23:38:255,0,126
+chr21	40020531	chr21:40020531:M	GAGAGAGAGAGAGAGAGGAGAGAGA	<14.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:8,10:19:190,0,144	0/1:9,6:17:96,0,176	0/0:17,0:17:0,51,255
+chr21	40022781	chr21:40022781:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:228,0,189	0/1:25,25:52:255,0,255	0/0:60,0:61:0,179,255
+chr21	40029427	chr21:40029427:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,14:33:172,0,215	0/0:29,0:31:0,90,255	1/1:3,18:22:255,11,0
+chr21	40039299	chr21:40039299:M	AAATAAAAATCAAAAAAAAAA	<3.3>	.	.	Motif=AAATAA	GT:AD:DP:PL	0/1:11,15:27:228,0,151	0/1:14,18:32:255,0,192	0/0:37,0:37:0,110,255
+chr21	40040928	chr21:40040928:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,0:45:0,129,255	0/1:17,15:33:255,0,255	0/0:39,0:42:0,120,255
+chr21	40050488	chr21:40050488:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,10:21:125,0,144	0/0:24,1:27:0,61,255	1/1:0,21:21:255,62,0
+chr21	40061570	chr21:40061570:M	AAAAAAAAAAAAAAAAGAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,8:17:102,0,87	0/0:19,0:23:0,66,255	1/1:0,13:13:227,38,0
+chr21	40064117	chr21:40064117:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,11:36:105,0,255	0/1:17,13:30:145,0,216	1/1:0,29:29:255,86,0
+chr21	40067726	chr21:40067726:M	TCCCTCCCTCCCCTCATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	<7.2>	.	.	Motif=TCCC	GT:AD:DP:PL	1/1:0,6:8:255,24,0	0/0:0,0:2:0,5,29	1/1:0,7:8:255,24,0
+chr21	40069086	chr21:40069086:M	AGAAAAAAAAAAAAAAGAAAAAGAAAAGAAAGAAAA	<7.4>	.	.	Motif=AGAAA	GT:AD:DP:PL	0/1:8,9:19:131,0,116	0/0:14,0:15:0,43,255	0/1:10,7:19:102,0,149
+chr21	40070396	chr21:40070396:M	AAAAGAAAAGAAAAGAAAAGAAAAAGAAAGAGAAAGAAAGACAAAGAGAAAGAAA	<8.3>	.	.	Motif=AAAAGA	GT:AD:DP:PL	0/1:3,7:19:113,0,22	0/0:22,0:35:0,41,255	1/1:0,17:24:255,52,0
+chr21	40082695	chr21:40082695:M	AAAAGAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,22,13:36:255,204,136,255,0,255	0/2:17,0,12:30:122,176,255,0,255,220	1/2:0,14,13:28:255,198,153,255,0,180
+chr21	40084502	chr21:40084502:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACA	<13.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:8,1,18:28:255,255,255,0,213,175	2/2:1,0,17:20:255,255,255,2,50,0	0/1:5,18,0:24:255,0,96,255,149,255
+chr21	40097532	chr21:40097532:M	TAAACATAAACATA	<22.5>	.	.	Motif=TAAACA	GT:AD:DP:PL	0/0:34,9:43:0,20,255	0/0:44,4:48:0,96,255	0/1:42,19:61:47,0,255
+chr21	40097955	chr21:40097955:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<11.8>,<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:6,8,3:17:181,0,126,171,121,255	0/2:9,0,3:14:1,28,255,0,228,219	1/2:0,10,13:23:255,123,93,249,0,214
+chr21	40098861	chr21:40098861:M	CACCTCACCTC	<27>	.	.	Motif=CACCT	GT:AD:DP:PL	0/0:48,9:57:0,62,255	0/0:36,4:40:0,72,255	0/1:40,18:58:44,0,255
+chr21	40100636	chr21:40100636:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,8:27:62,0,255	0/0:15,2:18:0,10,209	0/0:25,3:30:0,32,255
+chr21	40106894	chr21:40106894:M	TATTTTATTTTTTTT	<3.2>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:1,15:17:255,28,0	1/1:0,24:27:255,77,0	.
+chr21	40117949	chr21:40117949:M	ACACACACACACACACACACACATACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,12:25:153,0,173	1/1:0,36:39:255,113,0	0/0:39,2:41:0,84,255
+chr21	40133602	chr21:40133602:M	AAAAAAAACAAAAAACAAAAAAAAAGAAAAGAAAGAAGAAAAAA	<43>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,10:20:135,0,132	1/1:0,26:26:255,77,0	0/0:27,0:27:0,80,255
+chr21	40137179	chr21:40137179:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:11:93,0,39	0/0:15,3:18:0,2,204	1/1:1,15:21:255,43,0
+chr21	40137595	chr21:40137595:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,24:25:255,255,255,71,64,0	1/2:0,18,10:29:255,145,88,255,0,238	2/2:0,2,22:25:255,255,255,70,35,0
+chr21	40141976	chr21:40141976:M	ACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6:22:102,0,255	1/1:0,21:22:255,66,0	0/0:38,0:39:0,117,255
+chr21	40145977	chr21:40145977:M	TGTATGTATGTATACATGTACATATGTATGTAT	<9.2>	.	.	Motif=TGTA	GT:AD:DP:PL	0/1:17,18:35:150,0,134	1/1:0,22:26:255,62,0	0/1:12,14:31:118,0,89
+chr21	40152117	chr21:40152117:M	AAAAAAAAAAACACAAAAAAAACAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,93,255	0/0:35,0:36:0,105,255	0/1:12,12:26:254,0,255
+chr21	40156054	chr21:40156054:M	TATATATAATATAATTTATATTATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,18:23:255,0,68	0/0:15,0:15:0,45,255	0/1:9,21:30:255,0,156
+chr21	40163071	chr21:40163071:M	ACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/3:11,0,0,4:18:71,106,255,60,255,255,0,204,255,255	0/2:10,0,8,1:20:201,233,255,0,178,255,118,255,255,255	1/3:0,16,1,10:29:255,255,244,255,150,255,255,0,255,255
+chr21	40164802	chr21:40164802:M	AAAATAAATAAATAAAATAAAATGAAATAAAA	<7.2>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:15,21:36:255,0,255	0/0:28,0:28:0,84,255
+chr21	40166989	chr21:40166989:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,23:40:255,0,147	0/1:5,15:23:211,0,43	1/1:1,28:29:255,67,0
+chr21	40174532	chr21:40174532:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:27:255,71,0	0/1:16,16:36:255,0,255	0/1:23,11:37:211,0,255
+chr21	40175771	chr21:40175771:M	ACACACACATACACACACACACACACACACACACACACGCACACACACACACACGCACACACACA	<34.5>,<37.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,5:5:141,141,141,15,15,0	1/2:0,2,2:4:101,51,45,51,0,46	1/1:0,3,0:3:83,9,0,84,9,86
+chr21	40188786	chr21:40188786:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,11:26:255,194,244,255,0,255	1/1:1,25,0:32:255,73,0,255,90,255	0/2:16,1,4:21:9,52,255,0,217,233
+chr21	40200017	chr21:40200017:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:22:111,0,138	0/1:13,7:23:69,0,164	0/1:10,5:18:37,0,155
+chr21	40201378	chr21:40201378:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,24:46:255,0,255	0/1:23,32:55:255,0,251	0/1:18,20:39:255,0,230
+chr21	40206687	chr21:40206687:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:37:153,0,232	0/1:10,12:29:137,0,136	0/1:12,15:30:175,0,142
+chr21	40214736	chr21:40214736:M	AAAAAAAAAAAAAAAAACAAAACAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,1:17:0,22,211	0/0:17,1:19:0,39,255	0/1:13,33:47:255,0,87
+chr21	40215226	chr21:40215226:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:3:77,9,0	.
+chr21	40215941	chr21:40215941:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,16:39:180,0,255	0/1:12,15:28:180,0,136	0/1:22,20:43:234,0,255
+chr21	40216284	chr21:40216284:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18:40:255,0,255	0/1:15,17:33:255,0,253	0/0:44,0:45:0,134,255
+chr21	40231125	chr21:40231125:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:28:159,0,168	0/1:12,9:23:111,0,142	1/1:2,24:32:255,56,0
+chr21	40240350	chr21:40240350:M	TTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:7:0,21,194	0/1:2,12:18:255,0,35	0/0:0,0:2:0,1,2
+chr21	40242150	chr21:40242150:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,5:43:0,39,255	0/1:17,14:31:143,0,192	0/0:35,3:39:0,63,255
+chr21	40257470	chr21:40257470:M	ACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,5:18:96,0,255	0/0:15,0:17:0,25,255	1/1:0,3:7:106,12,0
+chr21	40261653	chr21:40261653:M	ACACACACACACACACACACACACACACACACACA	<16.5>,<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,10,16,0:27:255,248,255,149,0,210,255,255,255,255	2/3:1,1,7,7:19:255,255,255,161,159,149,92,159,0,169	0/1:16,18,0,0:35:196,0,163,255,217,255,255,255,255,255
+chr21	40266778	chr21:40266778:M	ATATATATATATATATATATATA	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,1,0:6:65,14,8,28,0,71	1/1:0,4,0:5:107,12,0,110,15,135	2/2:0,0,4:10:232,150,132,27,19,0
+chr21	40266800	chr21:40266800:M	ACACACACACACACCCCCACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,2:5:12,0,25	0/0:8,0:8:0,22,102	0/1:6,3:9:14,0,52
+chr21	40280182	chr21:40280182:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2,0:10:7,0,107,30,132,217	0/2:12,0,2:14:15,33,196,0,200,255	1/2:2,7,3:12:137,17,18,68,0,109
+chr21	40282591	chr21:40282591:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,28	.	1/1:0,5:8:169,21,0
+chr21	40292061	chr21:40292061:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,15:30:197,0,196	0/1:11,19:30:252,0,109	0/1:19,18:37:224,0,242
+chr21	40292186	chr21:40292186:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,1,3:12:21,34,156,0,85,99	1/2:1,1,1:3:11,2,20,3,0,22	1/2:0,6,2:10:129,42,37,108,0,146
+chr21	40292501	chr21:40292501:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,1:47:0,120,255	0/0:38,1:42:0,105,255	0/1:18,27:47:255,0,207
+chr21	40296832	chr21:40296832:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:0,0:1:0,3,10	0/1:1,3:5:82,0,14
+chr21	40318337	chr21:40318337:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:51:255,0,208	0/1:15,20:36:248,0,169	1/1:0,28:29:255,85,0
+chr21	40321617	chr21:40321617:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/0:24,1:26:0,56,255	0/1:11,6:20:58,0,158
+chr21	40322522	chr21:40322522:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,18:29:255,0,103	0/1:13,14:28:177,0,149	0/1:12,14:27:187,0,141
+chr21	40329613	chr21:40329613:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAATAAAAAATAAA	<15>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,6:6:108,18,0	1/1:0,16:16:255,47,0
+chr21	40330274	chr21:40330274:M	TATATTTATTATATTATATGCATATATTTATATATAATAAATTATATATTTATTATATTATAT	<3.8>	.	.	Motif=TATAT	GT:AD:DP:PL	0/1:6,8:15:255,0,106	0/1:1,2:3:68,0,17	0/1:5,3:9:106,0,101
+chr21	40334716	chr21:40334716:M	ACCACAACCACAACC	<1.5>	.	.	Motif=ACCACA	GT:AD:DP:PL	0/1:23,12:35:129,0,255	0/1:14,23:37:255,0,146	0/1:15,21:36:255,0,176
+chr21	40342611	chr21:40342611:M	TGTGTGTGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:25:0,67,255	0/1:7,4:11:14,0,45	0/0:14,0:14:0,37,152
+chr21	40342627	chr21:40342627:M	TATATATATATATATATATATAT	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,5:18:111,0,255	0/1:0,0:7:18,0,25	0/0:13,0:16:0,36,255
+chr21	40349137	chr21:40349137:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,84	1/1:0,3:3:81,9,0	0/0:11,0:16:0,37,255
+chr21	40354849	chr21:40354849:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:22:255,45,0	1/1:0,13:13:255,39,0	0/0:2,0:3:0,9,69
+chr21	40356389	chr21:40356389:M	ATATATATATATATATATAT	<13>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,9:34:212,0,255	0/1:11,6:20:152,0,255	0/0:37,0:40:0,119,255
+chr21	40357862	chr21:40357862:M	AAAAAAAAACAAAAACAAAAA	<3.7>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/1:19,19:38:255,0,255	1/1:0,32:32:255,96,0	0/0:39,0:39:0,117,255
+chr21	40363253	chr21:40363253:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,30,255	0/1:2,4:7:110,0,44	0/0:4,0:8:0,15,145
+chr21	40369386	chr21:40369386:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/0:14,0:19:0,44,255	1/1:0,12:15:206,35,0	0/1:8,12:25:181,0,74
+chr21	40370256	chr21:40370256:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:30:0,70,255	0/1:13,13:26:148,0,148	0/0:35,2:39:0,78,255
+chr21	40370628	chr21:40370628:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,2:30:0,51,255	0/1:12,14:26:172,0,136	0/0:41,0:42:0,123,255
+chr21	40371423	chr21:40371423:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,23:41:255,0,194	0/1:20,24:48:255,0,220	0/0:42,4:48:0,68,255
+chr21	40378555	chr21:40378555:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:0,0,0	1/1:0,4:6:124,13,0	.
+chr21	40396680	chr21:40396680:M	CTACTACTACTACTACTACTACCACCACTCCTACCACAACTACTACCACTAC	<18.3>	.	.	Motif=CTA	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:5,8:14:101,0,47	0/0:17,0:18:0,50,255
+chr21	40398627	chr21:40398627:M	TTTTTTCTTTCTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:11:51,0,51	0/1:8,3:12:12,0,100	0/0:16,0:19:0,50,255
+chr21	40399270	chr21:40399270:M	ACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7.6>	.	.	Motif=ACAAA	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:6,16:22:226,0,44	0/0:23,0:23:0,68,255
+chr21	40402666	chr21:40402666:M	TTTTTTATTTGTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:32:0,76,255	0/1:16,16:33:190,0,182	0/0:39,2:41:0,85,255
+chr21	40403630	chr21:40403630:M	CACACACACACACACACACACACACACACACACA	<16>,<18>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,13:26:255,233,255,226,0,255	1/2:4,10,10:25:227,113,238,122,0,252	2/2:1,0,17:18:255,255,255,35,51,0
+chr21	40410760	chr21:40410760:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,15:38:255,0,255	0/1:20,13:33:255,0,255	0/0:45,0:50:0,148,255
+chr21	40411176	chr21:40411176:M	ACACACACACACACACACACACACACACACACACACACACACACACAC	<19>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/0:16,0,0:16:0,48,255,47,255,255	0/1:10,5,0:18:120,0,244,149,162,255	0/2:11,0,9:20:93,151,255,0,185,127
+chr21	40419139	chr21:40419139:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,5:15:47,0,139	1/1:1,19:20:255,41,0	0/0:20,1:21:0,44,255
+chr21	40425670	chr21:40425670:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:15:14,0,133	0/1:8,3:12:24,0,94	0/1:7,1:9:2,0,89
+chr21	40428235	chr21:40428235:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<22>,<26>,<27>	.	.	Motif=TG	GT:AD:DP:PL	1/4:0,6,0,0,3:10:217,52,78,216,92,253,213,48,214,211,173,0,164,169,164	1/2:0,11,7,0,0:18:255,196,154,255,0,255,255,196,255,255,255,196,255,255,255	3/4:0,0,0,6,4:10:218,235,255,235,255,255,57,69,69,39,101,102,102,0,73
+chr21	40428834	chr21:40428834:M	ACACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:43,0:44:0,130,255	0/0:47,0:48:0,141,255	0/1:15,17:32:219,0,181
+chr21	40432206	chr21:40432206:M	AATAAAAAATAAATATATAAATAAATAAATAAATA	<11.8>,<12.8>,<13.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,9,13,1:29:255,251,182,178,0,112,255,178,171,255	0/1:7,3,0,0:13:74,0,229,40,230,255,83,238,255,255	2/3:0,0,11,4:15:255,255,255,63,62,19,170,147,0,126
+chr21	40433347	chr21:40433347:M	AAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:44,0,20	0/1:1,1:4:17,0,31	1/1:0,3:3:79,9,0
+chr21	40435547	chr21:40435547:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,21,15:38:255,236,165,255,0,255	1/1:2,23,1:26:255,41,0,255,58,255	1/2:0,15,14:31:255,255,189,226,0,179
+chr21	40452238	chr21:40452238:M	ACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	0/3:14,0,0,10:24:233,255,255,255,255,255,0,255,255,255	1/3:0,14,0,5:20:255,149,107,255,148,255,255,0,235,255	0/2:11,1,5,0:18:114,69,255,0,255,255,150,255,255,255
+chr21	40453041	chr21:40453041:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21>,<24>,<29>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,8,5:18:255,255,255,153,153,121,251,255,0,239	1/2:0,6,7,0:13:255,187,178,167,0,145,255,196,167,255	1/3:0,9,0,3:14:255,103,77,255,105,255,252,0,252,238
+chr21	40457530	chr21:40457530:M	AAACAAACAAACAAACAAACAAACAAAAAAAC	<9>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:15,16:31:198,0,180	0/1:19,22:41:255,0,206	0/0:49,0:49:0,144,255
+chr21	40481531	chr21:40481531:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:1,5:6:64,1,0	0/1:2,3:5:35,0,18
+chr21	40487274	chr21:40487274:M	TGTGTGTGTGCATGTGTGCGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTG	<26>	.	.	Motif=TG	GT:AD:DP:PL	0/0:11,0:16:0,5,69	1/1:5,8:23:92,7,0	0/1:6,7:16:49,0,15
+chr21	40487327	chr21:40487327:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:11,20:37:221,0,45	0/1:12,14:30:140,0,73	0/0:25,3:29:0,41,255
+chr21	40492678	chr21:40492678:M	AGAACAGAAAAAAAGAAAGAA	<6.2>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:24,7:31:48,0,255	1/1:0,23:24:255,68,0	0/1:30,11:41:91,0,255
+chr21	40493864	chr21:40493864:M	AAAAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,6,6:22:145,7,208,0,90,193	1/2:0,3,9:12:255,196,173,65,0,33	0/0:9,1,0:10:0,1,217,24,219,239
+chr21	40493880	chr21:40493880:M	ATATATACATATATATACATATATATATA	<15>,<15.5>,<16.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,1,7,7,0:21:160,89,90,26,54,51,10,4,0,108,134,106,88,151,255	1/3:0,3,0,7,0:11:175,132,111,110,93,90,17,0,16,30,119,96,99,58,160	2/4:0,0,7,0,5:17:255,203,175,126,117,89,158,109,62,132,150,73,0,102,195
+chr21	40494825	chr21:40494825:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,23:47:255,0,255	0/1:32,14:46:112,0,255	0/0:53,3:56:0,110,255
+chr21	40516122	chr21:40516122:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,21:36:255,0,183	0/1:16,23:39:255,0,175	0/0:48,0:48:0,142,255
+chr21	40516889	chr21:40516889:M	ATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:12,0,8:23:187,213,255,0,147,255	0/2:8,0,7:16:165,182,254,0,96,180	0/1:16,8,0:27:37,0,135,111,210,255
+chr21	40519851	chr21:40519851:M	TGTGTGTGTGTATGCGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,7:25:93,0,255	0/1:16,13:33:229,0,255	0/0:31,0:31:0,93,255
+chr21	40530880	chr21:40530880:M	TCCATCCATCCATCCATCCATCCATCCATCCATCCATTCAACCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACCATCCAT	<11.2>	.	.	Motif=TCCA	GT:AD:DP:PL	1/1:0,9:9:239,27,0	1/1:0,8:8:217,24,0	.
+chr21	40532869	chr21:40532869:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>,<16>,<19>,<20>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,16,1,6:24:255,255,255,119,184,136,255,255,90,255,255,255,0,255,255	2/3:0,0,14,11,0:26:255,255,255,255,255,255,255,255,0,255,255,255,197,255,255	1/4:0,7,0,1,13:22:255,239,255,255,255,255,255,211,255,255,197,0,186,179,156
+chr21	40548504	chr21:40548504:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:21:0,62,255	0/0:26,0:26:0,76,255	1/1:1,23:24:255,53,0
+chr21	40554197	chr21:40554197:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,1:19:0,38,255	0/1:18,8:28:55,0,248	0/1:20,5:28:28,0,255
+chr21	40558448	chr21:40558448:M	AAAAAGAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,18:39:223,0,255	0/0:27,1:28:0,65,255	0/1:22,12:34:118,0,255
+chr21	40559459	chr21:40559459:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,5:22:255,76,25,255,0,241	0/1:6,5,2:14:103,0,142,55,81,129	0/2:6,0,7:14:85,93,241,0,95,67
+chr21	40559787	chr21:40559787:M	TTTTTTTTTTTTTTTTTTTT	<14>,<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,3,4:9:169,178,216,71,110,96,107,105,0,93	1/3:0,4,0,5:12:227,106,143,236,156,255,137,0,132,116	0/2:5,1,2,1:9:44,29,170,0,117,139,44,98,69,114
+chr21	40563649	chr21:40563649:M	TATGTTTATGTTTGTTTATATATATGTTTAT	<4.8>	.	.	Motif=TATGTT	GT:AD:DP:PL	0/1:11,11:23:24,0,24	0/0:2,0:2:0,4,13	1/1:0,16:16:103,34,0
+chr21	40572073	chr21:40572073:M	TGTGTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGT	<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,7,14:23:255,141,115,101,0,41	0/2:6,2,9:17:86,64,180,0,49,28	0/2:6,2,9:17:88,65,181,0,50,28
+chr21	40574707	chr21:40574707:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,50,0	0/1:3,3:8:69,0,59	1/1:0,13:17:255,44,0
+chr21	40577242	chr21:40577242:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:29:255,85,0	0/1:16,10:28:101,0,204	1/1:0,25:27:255,78,0
+chr21	40580081	chr21:40580081:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:33:226,0,173	0/0:28,0:35:0,100,255	0/1:21,7:30:39,0,255
+chr21	40583907	chr21:40583907:M	AAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,7:28:255,178,147,255,0,255	0/2:16,0,11:30:255,255,255,0,255,255	0/1:21,14,0:37:156,0,255,250,255,255
+chr21	40585180	chr21:40585180:M	TTTTTTTTTTTTTTT	<14>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:17,1,5:27:112,147,255,0,255,255	0/2:10,0,9:23:213,247,255,0,187,255	0/1:17,16,0:35:204,0,198,255,255,255
+chr21	40585420	chr21:40585420:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,2,9	1/1:0,9:9:247,27,0	0/0:1,0:2:0,6,35
+chr21	40593321	chr21:40593321:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,17:31:227,0,162	0/1:18,22:42:255,0,205	0/1:15,22:37:255,0,165
+chr21	40595378	chr21:40595378:M	AAAAAAAAAGAAAAGAAAAGA	<5.2>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:12,16:29:224,0,151	0/1:17,27:44:255,0,178	0/1:16,14:30:173,0,211
+chr21	40596870	chr21:40596870:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,15:32:193,0,233	0/0:35,0:35:0,103,255	0/1:20,19:39:239,0,255
+chr21	40597501	chr21:40597501:M	TTTTTTTTTTTTTTTTTTTTTTT	<11>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:4:136,145,171,12,12,0	1/2:0,15,1:17:255,33,24,255,0,255	0/2:2,0,1:5:33,44,137,0,80,73
+chr21	40598498	chr21:40598498:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:43,0,17	0/0:1,0:1:0,3,16	0/0:3,0:3:0,9,50
+chr21	40603926	chr21:40603926:M	TTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,9:21:255,161,101,215,0,155	2/2:0,1,15:19:255,255,252,49,25,0	0/1:4,10,1:17:255,0,83,155,87,227
+chr21	40611058	chr21:40611058:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,88	0/0:3,0:3:0,9,50	0/1:7,4:11:36,0,88
+chr21	40615282	chr21:40615282:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,20,116	0/1:9,1:14:12,0,113	0/1:3,7:11:99,0,19
+chr21	40617017	chr21:40617017:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,18	1/1:0,3:4:41,1,0	0/0:7,1:8:0,6,106
+chr21	40618664	chr21:40618664:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:255,0,255	0/1:15,13:34:255,0,255	0/1:16,18:38:255,0,255
+chr21	40621923	chr21:40621923:M	GGAAGGAAAGGAAGGAAGAAAAAAGAAAGGAAGGAAGGAA	<6>,<10.2>	.	.	Motif=GGAA	GT:AD:DP:PL	1/2:0,3,12:15:69,40,255,45,0,29	1/2:1,6,15:22:122,46,255,94,0,75	0/2:10,1,7:19:0,29,255,0,39,10
+chr21	40622872	chr21:40622872:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,15:35:183,0,249	1/1:2,31:33:255,62,0	0/0:35,0:41:0,118,255
+chr21	40623239	chr21:40623239:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:1,29:30:255,70,0	0/1:15,20:35:255,0,176
+chr21	40628693	chr21:40628693:M	CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<8.5>,<10.5>,<11.5>,<12.5>	.	.	Motif=CTAT	GT:AD:DP:PL	1/2:0,9,14,0,0:23:255,255,255,255,0,214,255,255,255,255,255,255,255,255,255	1/3:0,11,0,23,0:35:255,255,255,255,255,255,255,0,255,255,255,255,255,255,255	2/4:0,0,7,0,18:26:255,255,255,255,255,255,255,255,255,255,211,197,0,140,153
+chr21	40629042	chr21:40629042:M	TGTGTGTGTATGTGTGTGTAGTATGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<33>,<34>,<37>,<38>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,9,0,0:18:255,160,108,160,0,108,255,160,160,255,255,160,160,255,255	1/3:0,4,0,3,0:8:193,81,72,148,83,140,114,0,67,105,164,50,118,114,156	2/4:0,0,7,0,6:13:255,225,255,104,169,148,255,225,104,255,198,121,0,198,180
+chr21	40636761	chr21:40636761:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,18:37:255,0,255	0/0:20,0:25:0,54,255	0/1:10,14:25:255,0,194
+chr21	40639076	chr21:40639076:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:27:108,0,210	0/0:26,0:30:0,84,255	0/1:14,6:20:49,0,195
+chr21	40639668	chr21:40639668:M	TGTGTATGTGTATGTGTGTGCATGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,6:15:69,0,126	0/0:24,0:24:0,71,255	0/1:18,9:29:90,0,255
+chr21	40640821	chr21:40640821:M	CACACTCACACCCCACACACACAAAAACACCACACGCACACACACAC	<24.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,14:24:198,0,121	0/0:19,0:19:0,56,255	0/1:12,6:18:59,0,171
+chr21	40642043	chr21:40642043:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:17,0,123	0/1:7,8:17:85,0,89	0/1:4,2:6:17,0,52
+chr21	40648251	chr21:40648251:M	ACACACACACACACACACACACACACACACACTCACACAC	<16>,<21>,<24>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,10,10:21:255,255,255,255,255,253,179,255,0,241	1/2:0,10,9,0:21:255,153,211,255,0,255,255,247,255,255	0/3:18,0,1,9:32:222,255,255,255,255,255,0,255,255,255
+chr21	40652348	chr21:40652348:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,20:32:255,0,17	1/1:0,40:49:255,121,0	0/0:14,2:29:0,1,255
+chr21	40654095	chr21:40654095:M	AAAAAGAAAAAGAAAAAAGAAAAA	<3.8>	.	.	Motif=AAAAAG	GT:AD:DP:PL	1/1:0,1:1:6,2,0	1/1:0,11:11:64,22,0	0/0:16,0:19:0,30,90
+chr21	40655447	chr21:40655447:M	TTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,13,0:21:174,0,84,233,144,255	0/2:15,0,7:27:155,193,255,0,255,255	1/2:0,9,7:18:255,205,178,157,0,212
+chr21	40656523	chr21:40656523:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:23:101,0,193	0/0:27,0:29:0,85,255	0/1:17,19:41:255,0,211
+chr21	40663258	chr21:40663258:M	GTGTGTGTGTG	<4.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,4:22:16,0,255	0/1:7,3:10:26,0,98	0/1:15,6:21:53,0,220
+chr21	40669591	chr21:40669591:M	TTTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,60,0	0/1:13,8:27:184,0,255	1/1:3,25:28:255,1,0
+chr21	40670537	chr21:40670537:M	AAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,1:18:0,18,255	0/1:16,6:24:112,0,255	0/1:14,3:18:23,0,255
+chr21	40671693	chr21:40671693:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:5:0,0,82	0/0:8,0:11:0,33,255	0/1:3,3:7:82,0,71
+chr21	40674610	chr21:40674610:M	TTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTT	<5.3>	.	.	Motif=TTTTCT	GT:AD:DP:PL	1/1:0,2:3:38,6,0	0/0:1,0:3:0,3,18	1/1:0,4:6:75,12,0
+chr21	40675015	chr21:40675015:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,13:27:174,0,173	0/1:15,13:29:153,0,190	0/1:12,18:33:248,0,143
+chr21	40681490	chr21:40681490:M	TTTTTTTTTTTTTTT	<12>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,25,3,8:38:255,255,189,255,93,255,255,0,255,255	0/3:11,0,2,9:26:255,255,255,124,255,255,0,255,255,255	1/2:0,16,9,0:26:255,255,232,255,0,255,255,169,255,255
+chr21	40684063	chr21:40684063:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:8,7:15:80,0,98	1/1:1,19:22:255,46,0
+chr21	40698870	chr21:40698870:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,83	0/0:3,0:3:0,9,84	0/1:2,10:12:233,0,19
+chr21	40706181	chr21:40706181:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:22:0,53,255	0/0:9,1:10:0,14,116	0/1:6,5:12:42,0,56
+chr21	40708101	chr21:40708101:M	GGGGTAGGGGAAGGGCAAGTGGGAA	<4>	.	.	Motif=GGGGAA	GT:AD:DP:PL	0/0:34,0:34:0,99,255	0/0:29,2:32:0,51,255	0/1:18,17:35:186,0,203
+chr21	40712805	chr21:40712805:M	GAGACAGAGAGAGAGAGAGAGAGAGAGAGA	<17>	.	.	Motif=GA	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/0:37,0:38:0,114,255	0/1:12,14:28:255,0,249
+chr21	40716381	chr21:40716381:M	TGTGTGTGTGTGTGTGTGTG	<9>,<11>	.	.	Motif=TG	GT:AD:DP:PL	0/2:21,0,10:31:102,190,255,0,255,255	0/2:13,1,16:30:202,255,255,0,180,159	0/1:23,21,0:44:255,0,255,255,255,255
+chr21	40720675	chr21:40720675:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/0:36,0:36:0,106,255	0/1:22,21:43:255,0,255
+chr21	40726550	chr21:40726550:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0,0:40:0,118,255,120,255,255	0/1:15,21,1:37:255,0,161,255,248,255	0/2:21,2,22:46:255,255,255,0,255,255
+chr21	40731729	chr21:40731729:M	CCCCCCCCCCCGCCCCCC	<19>	.	.	Motif=C	GT:AD:DP:PL	0/1:3,3:6:35,0,35	0/0:12,0:12:0,35,203	1/1:1,24:25:255,56,0
+chr21	40739782	chr21:40739782:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:29:145,0,209	0/1:17,15:35:173,0,206	0/1:12,19:33:254,0,128
+chr21	40746376	chr21:40746376:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,12:34:237,0,255	0/1:22,21:44:255,0,255	0/1:20,23:45:255,0,255
+chr21	40755453	chr21:40755453:M	TAAAAAATAAATAAAAAATAAA	<6.5>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:9,15:24:218,0,103	0/1:21,14:35:151,0,255	0/1:12,12:24:154,0,154
+chr21	40756977	chr21:40756977:M	GTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,16:30:206,0,159	0/1:15,18:33:216,0,164	0/1:13,12:25:142,0,160
+chr21	40759959	chr21:40759959:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9.5>,<10.5>,<11.5>	.	.	Motif=ATTT	GT:AD:DP:PL	3/3:0,0,0,20:20:255,255,255,255,255,255,60,60,59,0	1/3:0,8,0,3:11:255,81,57,198,54,168,218,0,144,205	2/3:0,0,9,5:14:255,255,255,94,93,53,169,145,0,129
+chr21	40765100	chr21:40765100:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,18:32:247,0,152	0/1:18,19:40:231,0,219	0/1:19,19:38:237,0,235
+chr21	40766670	chr21:40766670:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:10:16,0,74	0/0:4,1:7:0,6,67	0/1:4,4:9:47,0,32
+chr21	40766693	chr21:40766693:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:42,0,204	0/1:6,1:8:6,0,137	0/1:12,3:16:33,0,255
+chr21	40767881	chr21:40767881:M	TCTCTCTTTCTCTCTCTC	<12>	.	.	Motif=TC	GT:AD:DP:PL	0/1:21,11:34:217,0,255	0/1:22,20:45:255,0,255	0/1:19,16:35:255,0,255
+chr21	40780399	chr21:40780399:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<6>,<7>,<12>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,17,2,0:19:255,57,0,255,27,202,255,57,255,255	1/3:0,9,3,5:20:255,55,97,146,95,191,255,0,91,255	1/2:0,7,4,1:12:255,41,22,81,0,62,255,28,68,255
+chr21	40780424	chr21:40780424:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:17,2:20:0,28,184	0/1:9,2:12:1,0,75	0/1:7,4:13:18,0,55
+chr21	40781013	chr21:40781013:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,18:32:250,0,175	0/1:12,19:32:250,0,132	0/1:20,18:38:224,0,255
+chr21	40781993	chr21:40781993:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:0,0:1:12,3,0	1/1:0,3:3:83,9,0
+chr21	40789268	chr21:40789268:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:30:0,69,255	0/1:18,23:44:255,0,199	0/0:42,1:44:0,111,255
+chr21	40789554	chr21:40789554:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,8:19:95,116,255,0,126,106	0/1:6,6,1:18:171,0,145,165,90,250	0/2:8,0,8:18:100,139,255,0,143,97
+chr21	40790167	chr21:40790167:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,9:11:238,0,21	0/1:3,8:13:198,0,57	0/1:4,14:19:255,0,62
+chr21	40791157	chr21:40791157:M	AAAAAAAAAAAAAGAAAAGAAAAA	<23>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,1,6:17:63,93,255,0,140,146	1/2:0,9,14:24:255,242,255,156,0,190	0/2:14,0,12:26:143,215,255,0,215,179
+chr21	40792124	chr21:40792124:M	TCTTCTTCTTCTTCTT	<6.7>	.	.	Motif=TCT	GT:AD:DP:PL	0/0:9,0:11:0,32,190	1/1:0,3:3:53,9,0	0/0:13,0:13:0,38,234
+chr21	40792138	chr21:40792138:M	TTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:5:0,7,28	0/1:2,9:13:220,0,23	0/0:3,0:3:0,9,86
+chr21	40794543	chr21:40794543:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:18:73,0,144	0/1:6,18:25:235,0,32	0/1:18,18:39:214,0,214
+chr21	40794889	chr21:40794889:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/1:17,12:29:124,0,212	0/0:40,0:41:0,120,255
+chr21	40795355	chr21:40795355:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,81,255	0/1:13,23:37:255,0,134	0/0:35,0:35:0,103,255
+chr21	40800716	chr21:40800716:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:11:37,0,88	0/0:6,1:8:0,7,97	0/0:14,2:20:0,13,223
+chr21	40800963	chr21:40800963:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:11,14:26:169,0,128	0/0:34,0:36:0,105,255
+chr21	40805699	chr21:40805699:M	TTTTCTTTCTTTTCTTTTCTTTTTTTT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:15,16:31:255,0,238	0/1:8,10:18:170,0,123	0/1:21,22:43:255,0,255
+chr21	40807110	chr21:40807110:M	AATCAATCAATCAATCAATCAATCAATCAATCAAT	<7.8>	.	.	Motif=AATC	GT:AD:DP:PL	1/1:0,36:37:255,107,0	1/1:0,30:30:255,88,0	1/1:0,32:32:255,95,0
+chr21	40808475	chr21:40808475:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13:16:236,28,0	1/1:2,16:20:219,3,0	0/1:6,23:31:255,0,15
+chr21	40817087	chr21:40817087:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,19:44:226,0,255	0/1:14,16:33:190,0,173	0/1:14,17:34:241,0,156
+chr21	40818548	chr21:40818548:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:1,0:1:0,3,27	1/1:0,15:16:255,48,0
+chr21	40821112	chr21:40821112:M	ATATATATAGATATATATATCTTCACATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,12:12:255,36,0	0/1:0,22:28:255,0,88
+chr21	40821372	chr21:40821372:M	CACACACACAGACACACGCGCGCACACACACACACACACACACACAC	<24.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,14:14:238,41,0	0/1:7,9:17:111,0,76
+chr21	40822319	chr21:40822319:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:27,3,0	1/1:0,3:3:79,9,0	.
+chr21	40823204	chr21:40823204:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,13,2:37:255,0,255,211,255,255	0/1:19,14,0:35:255,0,255,255,255,255	1/2:0,16,21:37:255,255,255,255,0,190
+chr21	40824404	chr21:40824404:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:97,0,97	0/1:8,12:21:153,0,76	0/1:5,9:15:124,0,45
+chr21	40825267	chr21:40825267:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<11.5>,<13.5>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:0,12,8:25:255,148,217,209,0,255	1/1:0,21,0:23:255,67,0,255,69,255	2/2:0,0,10:11:168,198,255,29,33,0
+chr21	40827469	chr21:40827469:M	AAAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,0:9:0,21,159	0/0:1,0:4:0,1,19	1/1:0,9:20:217,20,0
+chr21	40827484	chr21:40827484:M	AAAGAAAAGAAAGAAAGAAA	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:20,0:22:0,60,255	0/0:19,0:23:0,59,255	0/1:8,18:32:255,0,153
+chr21	40831308	chr21:40831308:M	CACACACACACAGGCACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,16:31:217,0,198	1/1:0,34:34:255,100,0	0/1:17,25:43:255,0,196
+chr21	40834410	chr21:40834410:M	AATAATAATAATAATAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	<15>,<21>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:8,10,0:18:247,0,184,255,151,255	0/1:5,4,0:10:94,0,122,101,81,174	1/2:0,5,4:9:199,74,94,136,0,124
+chr21	40843369	chr21:40843369:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,9:16:204,0,127	0/1:17,14:34:255,0,255	0/1:10,25:37:255,0,172
+chr21	40843791	chr21:40843791:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,12:22:160,0,80	0/1:14,7:24:79,0,166	0/1:11,8:21:89,0,132
+chr21	40851703	chr21:40851703:M	AAAAAAAGAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,2:45:0,95,255	0/1:14,18:33:230,0,150	0/0:39,2:41:0,84,255
+chr21	40853041	chr21:40853041:M	CACACACACACACACACACACACACACACACACACA	<23>,<25>,<26>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,5,0,2:8:207,54,36,183,35,174,153,0,148,146	2/3:0,0,5,6:11:255,255,255,100,100,68,84,83,0,52	1/2:0,4,5,0:10:255,140,122,110,0,89,209,88,109,194
+chr21	40853692	chr21:40853692:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,77,255	0/1:21,13:36:140,0,255	0/0:28,2:30:0,53,255
+chr21	40855201	chr21:40855201:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/1:5,5:13:79,0,50	0/1:8,3:11:22,0,111
+chr21	40856358	chr21:40856358:M	GAGAGAGAGAGAGAGAGAGA	<8>	.	.	Motif=GA	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:23,0:25:0,70,255	0/1:12,22:36:255,0,194
+chr21	40857178	chr21:40857178:M	ACACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:34:0,100,255	0/1:16,17:33:202,0,184	0/1:19,11:31:109,0,255
+chr21	40867099	chr21:40867099:M	AGAGAGAGAGAGAGAGA	<10.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,14:33:218,0,255	0/0:5,0:5:0,15,110	0/1:8,14:23:243,0,112
+chr21	40875086	chr21:40875086:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,3,0:18:21,0,180,68,194,255	0/2:6,1,4:13:50,59,184,0,60,78	0/1:11,5,0:20:65,0,137,111,160,255
+chr21	40883733	chr21:40883733:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:27:0,79,255	0/1:13,16:30:211,0,141	0/1:13,11:25:136,0,161
+chr21	40884083	chr21:40884083:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:15,6:22:43,0,212	0/1:10,8:18:95,0,131
+chr21	40889997	chr21:40889997:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,23:34:255,0,178	0/1:17,32:52:255,0,255	1/1:0,38:41:255,122,0
+chr21	40901110	chr21:40901110:M	CCCCCGCCCCCTCCCCCCCCCCC	<22>	.	.	Motif=C	GT:AD:DP:PL	0/1:7,19:28:255,0,51	0/1:2,7:10:92,0,7	1/1:0,19:19:255,56,0
+chr21	40905882	chr21:40905882:M	AAAAAAAAGAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,63,255	0/0:29,2:31:0,56,255	0/1:21,14:36:157,0,255
+chr21	40909827	chr21:40909827:M	ATATATATATATATATATATACTTTTATATATAT	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,7:25:170,0,255	0/0:5,0:5:0,15,134	1/1:0,13:13:255,39,0
+chr21	40912957	chr21:40912957:M	TTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5,0:7:177,21,0,129,20,115	1/2:0,3,2:5:144,35,20,52,0,37	1/2:0,6,3:11:249,42,23,104,0,90
+chr21	40913377	chr21:40913377:M	ACACACACACACACACACACACACACACACACACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,28:28:255,84,0	1/1:0,11:21:255,36,0	1/1:0,35:38:255,113,0
+chr21	40913800	chr21:40913800:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,33:38:255,37,0	0/1:17,19:36:229,0,194	1/1:3,55:59:255,119,0
+chr21	40922518	chr21:40922518:M	CACACACACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	.	1/1:0,12:13:223,38,0	.
+chr21	40922802	chr21:40922802:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<7>,<10>,<12>	.	.	Motif=TATC	GT:AD:DP:PL	0/3:19,0,0,9:28:91,172,255,171,255,255,0,255,255,255	1/3:0,17,0,7:24:255,125,144,255,192,255,255,0,255,255	0/2:13,0,10,0:23:120,186,255,0,242,176,185,255,206,255
+chr21	40922965	chr21:40922965:M	AAAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,31:34:255,255,255,101,93,0	1/2:0,19,15:36:255,255,255,255,0,255	2/2:0,1,40:46:255,255,255,131,98,0
+chr21	40923354	chr21:40923354:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:1,30:31:255,73,0	1/1:1,43:44:255,111,0
+chr21	40924546	chr21:40924546:M	AAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17,1:21:255,54,0,255,42,255	1/2:0,10,6:17:255,102,55,172,0,137	1/1:0,24,2:27:255,78,0,255,43,255
+chr21	40925384	chr21:40925384:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,40:41:255,102,0	1/1:0,39:39:255,115,0	1/1:0,49:49:255,145,0
+chr21	40926278	chr21:40926278:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,20:22:255,46,0	1/1:0,31:35:255,99,0	1/1:0,36:36:255,106,0
+chr21	40927731	chr21:40927731:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,60,1:61:255,180,0,255,161,255	1/2:0,18,32:50:255,255,255,255,0,177	1/1:0,53,0:53:255,159,0,255,156,255
+chr21	40935019	chr21:40935019:M	TTTTTCTTTTCTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	<44>,<45>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,4:7:128,58,49,51,0,31	1/2:0,1,3:4:65,41,38,16,0,5	1/2:0,2,2:4:77,28,22,34,0,22
+chr21	40950142	chr21:40950142:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,21:44:255,0,255	0/1:25,27:52:255,0,255	1/1:0,40:40:255,118,0
+chr21	40953242	chr21:40953242:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:42:0,105,255	0/1:18,21:41:255,0,209	0/0:42,3:46:0,80,255
+chr21	40964233	chr21:40964233:M	ATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:26,28:58:255,0,255	0/1:24,22:46:238,0,255	1/1:0,46:51:255,148,0
+chr21	40966924	chr21:40966924:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:21:102,0,139	0/1:9,10:19:116,0,99	1/1:1,24:28:255,63,0
+chr21	40973828	chr21:40973828:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,255	0/1:17,19:38:255,0,255	1/1:0,42:46:255,134,0
+chr21	40986198	chr21:40986198:M	AAAAGGAAAAGAAAAGAAAAGAA	<5.4>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:24,22:46:255,0,255	0/1:20,16:36:255,0,255	1/1:0,33:33:255,99,0
+chr21	40989717	chr21:40989717:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,16:41:255,0,255	0/1:19,11:33:220,0,255	1/1:0,30:31:255,90,0
+chr21	40999709	chr21:40999709:M	TTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,2,17:35:255,255,255,0,255,255	0/2:25,1,10:40:195,160,255,0,255,255	1/2:0,7,21:28:255,255,255,124,0,42
+chr21	41000138	chr21:41000138:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.8>,<9.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/2:9,0,14,0:23:255,255,255,0,250,205,255,255,172,255	0/1:3,10,0,0:13:255,0,54,255,83,255,255,54,255,255	2/3:0,0,9,12:21:255,255,255,193,226,166,169,170,0,109
+chr21	41006219	chr21:41006219:M	GTGTGTGTGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,16:33:205,0,224	0/1:13,19:32:245,0,138	0/0:32,0:33:0,97,255
+chr21	41012829	chr21:41012829:M	CACACTCACACACGCACTCACACACATACCCAACACAAACTCACACACA	<23.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,7:22:70,0,198	0/0:22,0:22:0,65,255	0/1:16,13:29:155,0,204
+chr21	41015243	chr21:41015243:M	AAATAAATAAATAAATAAATAA	<8.5>,<8.8>,<9.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,12,0,4:17:255,84,37,255,84,255,232,0,214,186	3/3:0,0,0,8:8:245,169,147,245,169,245,24,24,24,0	1/2:0,17,11,0:28:255,239,162,255,0,255,255,239,255,255
+chr21	41019616	chr21:41019616:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:22:172,0,98	1/1:1,20:26:255,45,0	0/0:25,0:25:0,73,255
+chr21	41023102	chr21:41023102:M	ATATATATATATATATATATATATATATATATATATATA	<12.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:1,0,10:18:255,209,255,0,77,39	2/2:0,0,0:1:8,10,11,2,3,0	1/2:0,11,4:22:255,106,48,255,0,215
+chr21	41023140	chr21:41023140:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15.5>,<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:1,0,3,5:10:73,99,234,33,47,20,12,36,0,8	.	1/2:0,5,3,2:10:151,37,101,126,0,114,127,8,111,122
+chr21	41035097	chr21:41035097:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAAGAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:0,23:23:255,67,0	0/1:13,3:18:1,0,196
+chr21	41041811	chr21:41041811:M	AGAAAGAGAAAGAGAAAGAAAGAGAGAGACAGAAAGAAAGAAAGAAAAAAGAAAGA	<1.5>	.	.	Motif=AGAAAG	GT:AD:DP:PL	1/1:0,6:7:169,21,0	.	0/1:8,5:14:83,0,142
+chr21	41044192	chr21:41044192:M	TCTCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:1,45:46:255,117,0	0/1:11,22:34:255,0,117
+chr21	41049550	chr21:41049550:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,22,18:41:255,255,227,255,0,255	2/2:0,3,32:37:255,255,255,102,55,0	0/1:7,20,0:27:255,0,49,255,126,255
+chr21	41051733	chr21:41051733:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:34:223,0,197	0/0:27,0:27:0,79,255	0/1:21,14:39:148,0,255
+chr21	41055109	chr21:41055109:M	AAAAAAAAAAAAAAAAA	<15>,<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,19,12,0:32:255,170,139,255,0,255,255,220,255,255	2/3:1,0,6,7:15:181,204,255,116,202,177,88,106,0,135	0/1:13,22,1,0:38:255,0,255,255,215,255,255,234,255,255
+chr21	41055830	chr21:41055830:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<22>,<23>,<26>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,6,5:11:217,220,223,133,136,118,103,103,0,150	1/3:0,5,0,1:6:152,27,13,109,28,96,129,0,82,130	2/3:0,0,5,6:11:227,231,236,161,165,151,84,84,0,118
+chr21	41062611	chr21:41062611:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,12:25:155,224,255,0,210,174	0/0:29,2,4:35:0,66,255,31,255,255	1/2:0,18,18:36:255,255,255,255,0,255
+chr21	41062905	chr21:41062905:M	AAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:13:106,0,139	0/0:11,0:15:0,36,255	1/1:0,18:23:255,68,0
+chr21	41070490	chr21:41070490:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,11:36:194,0,255	0/0:32,0:37:0,96,255	0/1:15,15:32:255,0,255
+chr21	41070734	chr21:41070734:M	TCTCTCTCTCTC	<5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:25,20:45:255,0,255	0/1:16,15:31:182,0,200	0/1:23,17:40:202,0,255
+chr21	41073040	chr21:41073040:M	TCTATCTATCTAGCTATATATCTAT	<5.2>	.	.	Motif=TCTA	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:49,0:49:0,144,255	0/1:15,15:30:200,0,192
+chr21	41085124	chr21:41085124:M	TTGTTGTTGTTGTTGTGTTGTTGTTGTTTTTGTTGTTGTTGCTGTT	<14.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:14,15:30:182,0,162	0/0:24,0:26:0,70,255	0/1:10,11:21:129,0,112
+chr21	41085947	chr21:41085947:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,11:20:144,0,107	0/0:20,0:21:0,61,255	0/1:6,13:22:181,0,57
+chr21	41091408	chr21:41091408:M	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAGGAA	<13>,<17>	.	.	Motif=GAAG	GT:AD:DP:PL	1/2:0,20,3:23:255,56,23,255,0,255	2/2:0,0,1:2:17,20,30,3,3,0	1/2:0,8,4:12:255,73,87,221,0,209
+chr21	41093559	chr21:41093559:M	CACATACACACACACA	<6>	.	.	Motif=CA	GT:AD:DP:PL	0/0:38,0:40:0,116,255	0/0:38,0:38:0,114,255	0/1:18,7:25:104,0,255
+chr21	41093587	chr21:41093587:M	ACACACACACACACACACACACACACACA	<19.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6,0:22:177,0,255,222,255,255	0/0:26,0,0:26:0,78,255,78,255,255	1/2:0,5,4:10:255,117,102,177,0,165
+chr21	41093868	chr21:41093868:M	TTTTTTTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,6:12:68,98,255,0,60,27	0/0:10,0,0:13:0,31,255,30,172,143	1/2:0,13,3:24:255,42,71,255,0,255
+chr21	41099351	chr21:41099351:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5,0:7:154,0,10,166,27,209	0/0:3,0,0:4:0,12,115,9,96,93	1/2:1,3,10:16:255,255,255,65,0,68
+chr21	41103102	chr21:41103102:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0,0:7:0,21,198,21,144,125	0/2:3,0,3:6:34,43,119,0,50,34	0/1:7,3,0:10:53,0,169,51,120,145
+chr21	41103488	chr21:41103488:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<26>,<27>	.	.	Motif=GT	GT:AD:DP:PL	0/3:11,0,0,2:13:21,54,255,34,255,255,0,255,255,255	2/3:0,0,5,5:10:255,255,255,83,83,54,83,83,0,54	0/1:9,5,0,0:14:110,0,235,133,251,255,137,251,255,255
+chr21	41107199	chr21:41107199:M	AAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3,0:14:57,0,221,78,233,255	0/0:18,0,0:23:0,63,255,63,255,255	1/2:0,3,4:9:196,106,90,78,0,61
+chr21	41108362	chr21:41108362:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:18,0,23:41:255,255,255,0,255,221	0/0:27,0,2:30:0,84,255,52,255,255	1/2:0,17,10:27:255,156,105,255,0,235
+chr21	41108524	chr21:41108524:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:22:0,46,255	0/0:21,0:24:0,69,255	0/1:7,8:16:97,0,81
+chr21	41112478	chr21:41112478:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:33:0,93,255	0/0:24,0:28:0,83,255	0/1:16,9:26:162,0,255
+chr21	41115488	chr21:41115488:M	TTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:155,18,0	.	1/1:0,4:6:123,15,0
+chr21	41116336	chr21:41116336:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,14:26:196,0,132	0/0:34,0:34:0,100,255	1/1:0,32:32:255,94,0
+chr21	41125939	chr21:41125939:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:24,17:42:189,0,255	0/0:46,2:48:0,105,255
+chr21	41126166	chr21:41126166:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,6:30:73,0,255	0/0:18,0:23:0,62,255	1/1:1,14:17:255,18,0
+chr21	41129065	chr21:41129065:M	AACAAAACAAAACAACAAAAAAAAAACACACACACAAAAAAACAAAACAACAACAACAACAA	<22.3>,<22.7>,<23.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/3:0,14,0,6:21:255,151,105,255,109,231,255,0,172,255	1/2:0,7,12,0:19:255,152,97,91,0,35,255,141,90,255	3/3:0,0,0,3:3:87,84,81,64,64,56,9,9,9,0
+chr21	41131440	chr21:41131440:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:14,18:32:255,0,175	0/1:24,20:44:238,0,255	1/1:0,37:37:255,109,0
+chr21	41140799	chr21:41140799:M	TGTGTTGTGTTGCTGTT	<2.6>	.	.	Motif=TGTGT	GT:AD:DP:PL	0/1:8,23:32:255,0,131	0/0:30,0:30:0,90,255	1/1:0,28:35:255,84,0
+chr21	41140817	chr21:41140817:M	GTGGTGGTGGTGGTGGTGGTG	<5.3>	.	.	Motif=GTG	GT:AD:DP:PL	0/1:13,25:38:255,0,246	0/0:30,0:30:0,90,255	1/1:0,41:41:255,123,0
+chr21	41145711	chr21:41145711:M	TTTTTTCTTTTCTTTTTTTTCTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,11:17:156,0,62	0/1:11,8:19:85,0,137	1/1:0,28:30:255,88,0
+chr21	41150797	chr21:41150797:M	TGTGTGTGTGGTGTGTGATGTATGTGTCTGGGTGTGTGATGTGAGGTGTGTAGTGTGGTGTG	<32>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,6:13:73,0,91	0/0:23,0:23:0,67,255	0/1:9,3:12:19,0,127
+chr21	41150916	chr21:41150916:M	TGTGTGTGTGTGTG	<6>	.	.	Motif=TG	GT:AD:DP:PL	0/1:23,7:30:50,0,255	0/0:44,0:44:0,130,255	0/1:16,14:30:181,0,213
+chr21	41154937	chr21:41154937:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,0,9:16:117,162,255,0,108,81	0/2:10,1,3:15:11,26,190,0,119,144	1/2:3,5,8:19:154,94,176,58,0,118
+chr21	41160431	chr21:41160431:M	ATATATATAGAAATATATATTACATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:9:217,21,0	1/1:0,0:1:1,0,0	1/1:0,2:4:86,11,0
+chr21	41168979	chr21:41168979:M	CCCTCCCTCCC	<2.5>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:6,3:9:6,0,34	0/0:3,0:4:0,1,19	0/0:4,0:4:0,10,38
+chr21	41168987	chr21:41168987:M	CCCCCCCGCCCCCCCCCCACCCC	<22>	.	.	Motif=C	GT:AD:DP:PL	1/1:1,8:10:127,8,0	.	1/1:0,1:1:18,3,0
+chr21	41169450	chr21:41169450:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/1:10,11:24:129,0,124	0/1:10,23:34:255,0,81
+chr21	41170216	chr21:41170216:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,32:47:255,0,122	0/1:21,21:44:250,0,251	1/1:0,45:45:255,132,0
+chr21	41189195	chr21:41189195:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,22:41:255,0,201	0/1:18,23:41:255,0,193	0/1:15,14:29:166,0,184
+chr21	41196316	chr21:41196316:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,30:32:255,76,0	1/1:1,34:35:255,86,0	1/1:1,37:40:255,100,0
+chr21	41197267	chr21:41197267:M	TTTTTTTTGTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:20:244,20,0	1/1:1,23:29:255,25,0	1/1:1,24:28:255,44,0
+chr21	41197656	chr21:41197656:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,20:29:255,0,81	0/1:26,34:62:255,0,255	0/1:28,19:47:205,0,255
+chr21	41198850	chr21:41198850:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<11.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:15,5:20:77,0,255	0/1:5,3:8:58,0,114	0/1:11,9:20:186,0,246
+chr21	41200191	chr21:41200191:M	AAAAAAAAAAACAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:195,0,196	0/1:11,7:20:81,0,131	0/1:21,18:40:207,0,254
+chr21	41218870	chr21:41218870:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:25:177,0,255	0/1:23,7:32:87,0,255	0/1:18,9:28:162,0,255
+chr21	41221045	chr21:41221045:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:13:104,0,52	0/1:14,6:24:43,0,214	0/1:11,15:30:203,0,135
+chr21	41221828	chr21:41221828:M	AAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:194,14,0	0/1:2,7:10:193,0,31	0/1:0,3:8:81,0,18
+chr21	41223354	chr21:41223354:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:29:116,0,234	0/1:17,14:32:159,0,201	0/1:16,13:30:153,0,199
+chr21	41225234	chr21:41225234:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,13:25:173,0,127	1/1:1,25:26:255,59,0	0/1:10,13:25:178,0,106
+chr21	41232869	chr21:41232869:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,5:19:44,0,152	0/1:7,5:12:50,0,85	0/1:8,9:17:109,0,91
+chr21	41242340	chr21:41242340:M	TCTCTCTCTCTCTCTCTC	<10>	.	.	Motif=TC	GT:AD:DP:PL	0/1:22,17:39:202,0,255	0/1:18,20:39:239,0,213	0/1:18,21:40:255,0,219
+chr21	41253442	chr21:41253442:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:60,0,60	0/0:18,0:19:0,55,255	0/1:5,7:13:87,0,52
+chr21	41259442	chr21:41259442:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,26:43:255,0,194	0/0:43,2:45:0,96,255	0/1:26,21:49:245,0,255
+chr21	41265174	chr21:41265174:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,16,0:37:189,0,255,255,255,255	1/2:3,19,10:32:255,127,196,255,0,255	0/1:9,14,0:24:196,0,93,255,138,255
+chr21	41266942	chr21:41266942:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<18>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,15:28:255,255,194,236,0,157	1/2:0,14,12:27:255,207,130,248,0,173	1/2:0,17,10:27:255,178,100,255,0,226
+chr21	41279025	chr21:41279025:M	TTGTTTTGTTTTTTTTG	<3.6>	.	.	Motif=TTGTT	GT:AD:DP:PL	0/1:21,30:51:255,0,255	0/1:22,15:37:255,0,255	0/1:27,31:58:255,0,255
+chr21	41286120	chr21:41286120:M	ATAGATAGATAGATAGATAGATAGATAGATAAATAAATGATAGATAGATA	<10.5>,<11.5>,<13.5>,<14.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/4:0,3,0,0,9:12:255,253,246,255,255,255,255,175,233,234,83,0,58,84,57	2/4:0,0,11,0,8:19:255,255,255,222,226,194,255,255,146,255,200,200,0,255,255	1/3:0,11,0,11,0:22:255,207,255,255,255,255,255,0,207,255,255,207,255,255,255
+chr21	41291172	chr21:41291172:M	CACACACACACACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,15:34:191,0,238	0/0:43,0:43:0,127,255	0/1:26,27:53:255,0,255
+chr21	41308519	chr21:41308519:M	TTTTTGTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:82,0,18	0/1:1,0:3:3,0,36	0/1:4,4:9:108,0,91
+chr21	41311252	chr21:41311252:M	ATATATATATATATATATATATATATATATATATATATATATATATGTATATATA	<29.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,3:4:52,0,10	.	0/0:0,0:1:0,0,0
+chr21	41312710	chr21:41312710:M	TGTGTGTGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,1,10,7:18:255,255,255,190,172,158,191,164,0,255	1/2:0,15,10,0:25:255,146,101,255,0,188,255,174,255,255	0/3:6,0,0,4:11:97,115,255,115,222,205,0,162,107,151
+chr21	41313801	chr21:41313801:M	TTGTTGTTGTTGTTGTTGTT	<7.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:18,17:35:232,0,245	0/1:22,15:37:168,0,255	0/1:20,18:39:229,0,255
+chr21	41314763	chr21:41314763:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,27:41:255,0,131	0/1:17,20:40:232,0,189	0/1:14,20:34:252,0,147
+chr21	41330135	chr21:41330135:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:18:208,0,1	0/1:11,13:30:158,0,133	1/1:0,15:17:255,49,0
+chr21	41333132	chr21:41333132:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:32:0,94,255	0/1:17,19:38:226,0,200	0/0:40,6:47:0,29,255
+chr21	41346023	chr21:41346023:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:43:255,0,255	0/0:42,0:43:0,126,255	0/1:6,30:47:255,0,30
+chr21	41352797	chr21:41352797:M	AAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,20,14:34:255,255,172,255,0,255	0/1:16,6,0:22:102,0,255,107,255,255	2/2:0,0,18:18:255,255,255,54,53,0
+chr21	41355557	chr21:41355557:M	AAACAAACAAACAAACAAACAAACA	<5.2>,<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,0,36:36:255,255,255,107,108,0	1/2:0,13,16:29:255,255,255,230,0,255	0/2:26,0,24:50:255,255,255,0,255,255
+chr21	41356041	chr21:41356041:M	ACACACACACACACACACACACACACACACACACACACACACACA	<19.5>,<21.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	3/4:0,0,0,11,9:20:255,255,255,255,255,255,153,154,154,95,157,188,187,0,130	1/4:0,14,0,0,9:25:255,255,232,255,255,255,255,158,255,255,255,0,255,255,255	2/3:1,0,4,4,0:11:104,119,239,52,113,94,64,111,0,109,120,193,69,128,199
+chr21	41362741	chr21:41362741:M	TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:121,21,0	1/1:0,6:6:99,17,0	0/1:2,3:5:36,0,19
+chr21	41365204	chr21:41365204:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,30:30:255,88,0	0/1:22,16:38:189,0,255
+chr21	41373806	chr21:41373806:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:6:0,17,96	0/1:10,3:14:13,0,129	0/1:11,4:15:25,0,145
+chr21	41384839	chr21:41384839:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,4:19:29,0,182	0/1:16,14:32:146,0,200	0/0:23,3:27:0,26,255
+chr21	41386996	chr21:41386996:M	AACAACAACAACAACAA	<4.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:27,20:47:255,0,255	0/1:16,18:34:232,0,191	0/0:41,1:42:0,105,255
+chr21	41389198	chr21:41389198:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,12:29:146,0,204	0/1:13,12:26:135,0,162	0/0:38,2:43:0,87,255
+chr21	41391006	chr21:41391006:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,16,13:30:255,216,255,255,0,255	0/2:12,3,12:27:130,155,255,0,123,161	0/1:7,16,0:23:219,0,57,255,105,255
+chr21	41391779	chr21:41391779:M	TTTTCTTTTTCTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,22:34:255,0,194	0/1:9,28:37:255,0,137	0/0:36,0:39:0,116,255
+chr21	41400704	chr21:41400704:M	TTTATTTATTTATTTATTT	<3.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,50:50:255,147,0	1/1:0,39:39:255,115,0
+chr21	41401686	chr21:41401686:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:3,30:35:255,49,0	1/1:1,40:41:255,103,0
+chr21	41409237	chr21:41409237:M	ACACACACACACACACACACACATACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:1,40:45:255,113,0	1/1:1,31:33:255,79,0
+chr21	41419783	chr21:41419783:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:6:69,1,0	1/1:0,8:9:141,26,0	1/1:1,7:9:108,9,0
+chr21	41420282	chr21:41420282:M	GGGCGGGGGCGCGGGCGCGGGCGCGGGC	<3.7>,<5.7>	.	.	Motif=GGGCGC	GT:AD:DP:PL	0/1:6,13,0:20:255,0,112,255,113,255	1/2:0,14,10:24:255,177,210,255,0,255	0/2:8,0,4:12:40,74,255,0,147,115
+chr21	41424227	chr21:41424227:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,2,12:25:169,150,255,0,163,129	1/2:0,9,10:20:255,146,116,165,0,111	0/0:29,0,3:32:0,87,255,40,255,255
+chr21	41429905	chr21:41429905:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:13:30,0,204	1/1:0,5:7:139,9,0	0/1:9,11:21:255,0,197
+chr21	41430452	chr21:41430452:M	TGGGAATGGGACTGGG	<2>	.	.	Motif=TGGGAA	GT:AD:DP:PL	0/1:12,4:16:50,0,250	0/0:29,1:30:0,65,255	0/0:35,2:37:0,63,255
+chr21	41431482	chr21:41431482:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,15:42:169,0,255	1/1:2,33:35:255,67,0	0/1:15,19:35:246,0,182
+chr21	41437475	chr21:41437475:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:22:182,0,105	0/0:48,1:49:0,126,255	0/1:13,19:32:255,0,146
+chr21	41442007	chr21:41442007:M	GTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGCGCGTGTGTGTGTG	<26.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,9:20:179,0,217	0/0:18,0:19:0,57,255	0/1:15,3:18:29,0,255
+chr21	41448931	chr21:41448931:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,22,4:26:255,102,37,255,0,255	1/1:0,31,0:31:255,93,0,255,93,255	1/2:0,14,5:20:255,137,97,255,0,255
+chr21	41451835	chr21:41451835:M	AAAAAAAAAAAAAAAAACAAACAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:5:0,11,98	0/1:1,4:7:96,0,11	0/0:9,1:13:0,8,246
+chr21	41462272	chr21:41462272:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:26:255,63,0	1/1:0,15:20:255,53,0	1/1:0,20:21:255,60,0
+chr21	41473915	chr21:41473915:M	GTGAGTGAGGGAGTGAGTGAGGAGTGAGGAGGTGAGGGGGTGAGTG	<12.5>	.	.	Motif=GTGA	GT:AD:DP:PL	0/1:4,6:10:73,0,37	1/1:0,5:5:81,15,0	0/1:5,4:9:41,0,55
+chr21	41483767	chr21:41483767:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,7,8:16:255,126,100,90,0,91	0/2:2,1,10:14:251,164,163,0,19,17	1/2:2,14,9:25:255,122,88,175,0,199
+chr21	41485082	chr21:41485082:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,10,0,3:14:255,45,54,228,83,238,255,0,183,255	1/1:0,30,0,0:31:255,90,0,255,88,255,255,90,255,255	2/3:0,1,10,6:17:255,255,255,108,158,143,255,161,0,255
+chr21	41485653	chr21:41485653:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,13:31:148,0,242	0/0:32,5:37:0,21,255	0/1:13,14:27:173,0,155
+chr21	41495068	chr21:41495068:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,16:34:255,249,195,255,0,224	2/2:1,3,23:27:255,255,255,61,27,0	1/2:0,11,14:25:255,212,179,196,0,125
+chr21	41495627	chr21:41495627:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,8:20:255,127,175,170,0,236	1/2:4,7,5:16:101,26,103,60,0,156	1/1:2,16,0:18:248,17,0,255,48,255
+chr21	41495916	chr21:41495916:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:41:218,0,255	0/0:45,2:50:0,109,255	0/1:16,18:38:222,0,189
+chr21	41501609	chr21:41501609:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,8:10:212,0,0	1/1:0,2:3:70,9,0	1/1:0,13:15:255,42,0
+chr21	41513419	chr21:41513419:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,10:18:246,165,233,112,0,153	0/2:12,1,4:17:20,52,255,0,158,172	0/1:12,15,0:28:199,0,135,255,183,255
+chr21	41517991	chr21:41517991:M	TATATATATATATACATACATATATATATATATATA	<20>,<23>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,9,9:19:255,228,199,199,0,186	0/1:9,5,0:15:77,0,172,114,204,255	1/2:0,7,5:15:255,111,89,154,0,189
+chr21	41518026	chr21:41518026:M	ACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,3:18:30,0,255	0/1:9,4:13:68,0,206	1/1:0,2:2:54,6,0
+chr21	41518038	chr21:41518038:M	ATATATATATATATAATAT	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:23,7:31:4,0,223	0/0:25,0:26:0,72,255	0/1:14,15:31:106,0,119
+chr21	41518474	chr21:41518474:M	ACACACACACACACACACACACACACACACAAACACGCACACACCACA	<21.5>,<25>,<27.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,1:6:103,117,165,27,27,12,89,137,0,134	2/2:1,0,23,0:24:255,255,255,53,72,0,255,255,72,255	1/3:0,7,0,3:11:255,81,58,255,81,255,207,0,208,199
+chr21	41519884	chr21:41519884:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,29,18:48:255,255,255,255,0,255	0/2:16,0,7:23:57,123,255,0,239,218	1/1:2,39,0:44:255,92,0,255,125,255
+chr21	41522527	chr21:41522527:M	TTTTTTTTTTAATTTTCATTTTTATTTT	<4.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/1:16,8:24:107,0,255	0/1:19,19:38:255,0,255	0/0:34,0:34:0,102,255
+chr21	41525941	chr21:41525941:M	AAAAAAAAAAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:30:245,0,111	1/1:0,20:20:255,59,0	0/0:14,0:16:0,44,255
+chr21	41528708	chr21:41528708:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0,3:27:0,71,255,23,255,255	0/2:14,1,12:30:138,160,255,0,244,185	0/1:13,13,1:29:255,0,255,230,216,255
+chr21	41530831	chr21:41530831:M	TGTGTGTGTGTATGCGTGTGCGTGTGTGTGTGTGTATGTGTGTGTGT	<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,11:23:147,0,140	0/1:7,7:14:83,0,83	0/0:22,0:23:0,67,255
+chr21	41531638	chr21:41531638:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,23:32:255,0,126	0/1:16,17:35:255,0,255	1/1:0,43:43:255,129,0
+chr21	41533411	chr21:41533411:M	TAATAATAATAAT	<4>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:18,3:21:0,21,188	0/0:25,2:27:0,50,255	1/1:0,4:6:50,11,0
+chr21	41542198	chr21:41542198:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:117,12,0	0/0:2,0:3:0,9,72	0/1:1,4:7:122,0,10
+chr21	41544227	chr21:41544227:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:18:0,47,255	0/1:9,4:16:68,0,220	0/0:11,0:14:0,36,255
+chr21	41545476	chr21:41545476:M	AGCAAGCAAGCAAGCAAGCAAGCAAG	<8.5>	.	.	Motif=AGCA	GT:AD:DP:PL	0/0:14,0:16:0,42,255	0/0:21,0:21:0,63,255	1/1:0,12:13:255,36,0
+chr21	41545520	chr21:41545520:M	GGAAGGAAGAAAGGGAGGCAGGGAGGAAGGGAAAGGAGGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAGAAGGAAGAAAGGA	<16>	.	.	Motif=GGAA	GT:AD:DP:PL	0/0:1,0:1:0,3,25	0/1:2,4:7:85,0,39	0/1:3,4:7:80,0,53
+chr21	41545610	chr21:41545610:M	GAGGGAGGGAGGGA	<3.8>	.	.	Motif=GAGG	GT:AD:DP:PL	0/1:19,13:32:124,0,223	0/1:13,11:24:114,0,146	1/1:0,22:22:255,64,0
+chr21	41547561	chr21:41547561:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,51,0	1/1:0,21:28:255,69,0	1/1:0,18:21:255,45,0
+chr21	41552908	chr21:41552908:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:24,20:46:255,0,255	0/0:46,0:47:0,138,255
+chr21	41553411	chr21:41553411:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32,0:32:255,96,0,255,95,255	1/2:0,14,11:25:255,169,127,252,0,182	1/1:0,40,0:40:255,120,0,255,118,255
+chr21	41553576	chr21:41553576:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,29:30:255,255,255,88,90,0	1/2:4,9,18:32:255,255,255,98,0,190	2/2:1,0,32:34:255,255,255,82,99,0
+chr21	41554154	chr21:41554154:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTT	<24>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27,0:30:255,89,0,255,89,255	1/2:0,14,16:35:255,255,255,255,0,255	1/1:0,22,0:26:255,77,0,255,77,255
+chr21	41559027	chr21:41559027:M	TAAATAAATAAATAAGTAAATAAATAAATAAATA	<9.5>,<10.5>	.	.	Motif=TAAA	GT:AD:DP:PL	2/2:0,0,23:23:255,255,255,69,68,0	2/2:0,0,18:18:255,255,255,54,53,0	1/2:0,15,11:26:255,206,131,241,0,208
+chr21	41561616	chr21:41561616:M	CTCTCTCTCTCTCTCTCTC	<11.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:1,14:16:255,21,0	1/1:1,20:25:255,42,0	1/1:2,17:22:255,11,0
+chr21	41561634	chr21:41561634:M	CACACACACACACACAGACACACACACACACACACACACACACACACACACACAC	<25.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,5,9:15:198,88,70,70,0,30	0/2:6,1,9:16:76,74,191,0,60,29	0/2:8,4,8:20:86,30,179,0,49,43
+chr21	41562069	chr21:41562069:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:46,1:48:0,123,255	0/0:47,1:49:0,126,255	0/1:14,25:40:255,0,150
+chr21	41564352	chr21:41564352:M	AAAATAAAATAACATAAAATAAAA	<5>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,38:38:255,114,0	1/1:0,30:32:255,91,0	0/1:18,15:33:255,0,255
+chr21	41565091	chr21:41565091:M	TTTTTTTTTGTTTGTTTTTCGTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1:39:0,97,255	0/0:34,0:36:0,105,255	0/1:17,12:29:137,0,228
+chr21	41565853	chr21:41565853:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,38:38:255,112,0	0/1:13,16:29:215,0,159
+chr21	41566112	chr21:41566112:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:28:255,72,0	1/1:0,18:25:255,73,0	0/1:15,6:24:114,0,255
+chr21	41566289	chr21:41566289:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:1,33:36:255,77,0	0/1:20,17:43:255,0,255
+chr21	41570145	chr21:41570145:M	AAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,12,104	0/0:3,0:4:0,12,101	1/1:0,6:6:181,18,0
+chr21	41572988	chr21:41572988:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:1,40:44:255,106,0	0/1:11,21:32:255,0,108
+chr21	41573374	chr21:41573374:M	AAAAAAAAGAAAGAAAGAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:40,0:40:0,118,255	0/1:14,17:31:220,0,166
+chr21	41585357	chr21:41585357:M	ACACAGCACACACACCACACATGCACACCCCACATACACACATACCATACACACACCACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,6:20:240,0,255	0/1:15,2:17:50,0,255	0/1:26,8:34:255,0,255
+chr21	41586087	chr21:41586087:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:10:0,30,255	0/0:8,0:10:0,15,210	1/1:1,7:13:207,4,0
+chr21	41590933	chr21:41590933:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11:27:129,0,182	0/1:8,14:25:202,0,68	0/0:32,1:35:0,84,255
+chr21	41591630	chr21:41591630:M	CCTGTCCCTGTC	<2.2>	.	.	Motif=CCTGTC	GT:AD:DP:PL	0/1:17,8:25:29,0,141	0/0:21,2:23:0,39,235	0/0:13,1:14:0,26,149
+chr21	41591642	chr21:41591642:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,18:22:255,11,0	1/1:1,12:15:196,24,0	1/1:2,11:13:157,3,0
+chr21	41607856	chr21:41607856:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,6:9:84,108,204,0,47,29	1/2:2,3,2:8:45,5,39,31,0,80	1/2:2,7,9:19:202,127,208,93,0,154
+chr21	41608020	chr21:41608020:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,11:13:209,37,0	1/1:1,16:19:255,37,0
+chr21	41618017	chr21:41618017:M	ACACACACACACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,13:33:153,0,255	1/1:0,7:7:127,21,0	0/1:18,9:31:114,0,255
+chr21	41618363	chr21:41618363:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,1:2:11,14,39,0,17,11	0/0:4,0,0:4:0,12,107,12,76,65	1/2:0,6,5:13:226,70,49,109,0,78
+chr21	41619085	chr21:41619085:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	3/3:0,0,1,27:28:255,255,255,255,255,255,81,84,64,0	1/3:1,16,1,7:25:255,173,155,255,100,255,255,0,255,255	2/3:2,0,12,13:27:255,255,255,196,227,154,145,214,0,160
+chr21	41621516	chr21:41621516:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,2:34:0,61,255	0/1:16,11:29:110,0,218	0/0:31,1:32:0,76,255
+chr21	41625239	chr21:41625239:M	TTTGTTTGTTTGCTTGCTTGCTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:1,39:40:255,99,0	1/1:0,29:30:255,87,0	1/1:0,39:39:255,115,0
+chr21	41640303	chr21:41640303:M	TTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<41>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:88,9,0	1/1:0,3:3:88,9,0	1/1:0,3:6:108,13,0
+chr21	41643176	chr21:41643176:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:55,9,0	1/1:0,2:2:34,6,0	0/0:6,0:10:0,10,113
+chr21	41649136	chr21:41649136:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:255,43,0	0/1:4,9:17:125,0,39	1/1:0,22:22:255,65,0
+chr21	41649300	chr21:41649300:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,2:4:35,44,74,0,15,7	1/2:4,4,4:12:44,10,89,10,0,91	1/2:1,2,5:10:102,90,146,20,0,33
+chr21	41649806	chr21:41649806:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:36,0,36	0/1:4,5:9:59,0,42	0/1:3,10:14:133,0,21
+chr21	41655264	chr21:41655264:M	AAATAAATAAATATAAATAAATAAATAAATAAAAAATAAA	<13.2>,<14.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,6,7:13:255,134,98,116,0,78	2/2:0,0,2:4:86,66,60,12,11,0	1/1:0,13,0:13:255,39,0,255,38,246
+chr21	41655940	chr21:41655940:M	CACACACACACACACACACACACACACACAC	<17.5>,<18.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,6,6,0:15:255,100,66,107,0,96,255,107,131,255	2/3:0,1,2,7:12:252,208,200,194,176,192,53,8,0,39	1/3:0,9,0,4:13:255,107,80,255,106,240,238,0,158,231
+chr21	41655976	chr21:41655976:M	AAAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21,0:21:255,63,0,255,62,255	1/2:0,5,3:8:195,51,28,84,0,62	1/2:0,12,5:17:255,88,39,209,0,162
+chr21	41657977	chr21:41657977:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:7:30,0,48	0/0:1,0:2:0,6,27	1/1:0,1:1:16,3,0
+chr21	41661694	chr21:41661694:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:6,0,7:13:158,177,255,0,152,129	0/1:10,12,0:25:255,0,235,255,255,255	1/2:0,10,12:23:255,255,255,255,0,229
+chr21	41672608	chr21:41672608:M	CACACATACACCACACACAGCACTCCCTCACACACACAAACCACACACACACCACAAACACCACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:13,14:27:82,0,255	0/1:14,10:24:44,0,255	0/1:15,9:24:33,0,255
+chr21	41675869	chr21:41675869:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:30:96,0,212	0/0:32,1:34:0,82,255	1/1:0,29:32:255,78,0
+chr21	41675879	chr21:41675879:M	AATAATAATAAT	<2.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:18,8:30:118,0,255	0/0:35,0:39:0,117,255	1/1:0,6:11:166,24,0
+chr21	41676677	chr21:41676677:M	TTTTCTTTTTTCTTTCTTTTTTTTCTTTTTTTTTT	<36>,<38>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17,1:18:255,50,0,255,26,255	0/1:12,8,0:21:77,0,155,137,212,255	2/2:0,0,4:4:109,108,107,12,12,0
+chr21	41679699	chr21:41679699:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:37:206,0,255	0/0:33,0:35:0,102,255	0/1:21,16:39:194,0,255
+chr21	41680430	chr21:41680430:M	AAAAAAAAAAACAAAACAAACAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,17,15:36:255,255,255,255,0,255	0/2:21,1,17:41:255,255,255,0,255,255	0/1:16,16,0:32:200,0,199,255,255,255
+chr21	41693196	chr21:41693196:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8:16:181,0,95	0/0:15,0:17:0,45,255	0/1:9,12:24:255,0,186
+chr21	41713084	chr21:41713084:M	TTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:31:255,0,255	0/1:10,10:24:230,0,227	1/1:0,32:34:255,101,0
+chr21	41723807	chr21:41723807:M	AAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAGAAAAA	<39>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:18:255,35,0	1/1:2,16:18:241,19,0	1/1:2,20:22:255,29,0
+chr21	41725128	chr21:41725128:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:20:0,58,255	0/1:3,3:7:29,0,39	0/0:19,0:19:0,55,255
+chr21	41726444	chr21:41726444:M	TCCTCCTCCCTCTCTCCTTCTTTCTCCTCCTCCTCCTCTTGTTCTTCTTCTTCCTCCTTCCTGCTCCTCCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTC	<15.3>	.	.	Motif=TCC	GT:AD:DP:PL	1/1:0,4:6:163,15,0	1/1:0,1:2:35,3,0	1/1:0,0:2:49,6,0
+chr21	41726591	chr21:41726591:M	CTTCTTCTTCTT	<3>	.	.	Motif=CTT	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,16:19:255,56,0	1/1:0,26:27:255,79,0
+chr21	41728907	chr21:41728907:M	ATGAATGAATGAATGAATGAATGAA	<7.2>	.	.	Motif=ATGA	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:16,14:30:166,0,202	0/0:40,0:40:0,118,255
+chr21	41731772	chr21:41731772:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/1:17,12:29:121,0,207	0/0:47,1:49:0,126,255
+chr21	41736023	chr21:41736023:M	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	<13>,<17>,<45>	.	.	Motif=CTT	GT:AD:DP:PL	1/2:0,15,7,1:24:255,190,150,158,0,255,255,185,255,255	2/3:0,0,11,6:17:255,255,255,63,63,30,255,255,0,255	1/1:3,22,0,0:33:255,53,0,255,78,255,255,95,255,255
+chr21	41736057	chr21:41736057:M	TTATTATTATTATTATTATTATTATTATTATTAATATT	<11.7>,<13.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	2/3:1,0,11,7:19:223,255,255,70,84,31,90,131,0,89	0/3:2,0,1,4:8:71,87,129,36,55,40,0,25,13,26	1/2:2,11,6,1:23:156,56,89,135,0,234,181,62,255,255
+chr21	41749890	chr21:41749890:M	AAAAAAAAAAAAAAAAAAAAGAAAAGAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:4:0,12,69	0/1:5,3:8:27,0,60	0/0:6,1:7:0,3,85
+chr21	41758022	chr21:41758022:M	ATATATATATATATATATATA	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,8:10:230,29,0	1/1:0,0:1:14,3,0	1/1:0,5:7:165,21,0
+chr21	41758042	chr21:41758042:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15.5>,<16.5>,<19.5>	.	.	Motif=AG	GT:AD:DP:PL	2/2:0,1,16,0:17:167,151,148,44,34,0,217,198,51,255	2/3:0,0,1,6:10:99,113,182,110,160,153,5,4,0,2	1/2:0,5,13,0:18:177,96,81,49,0,3,228,134,56,255
+chr21	41777706	chr21:41777706:M	CACACACATCACACACACACACACACACACACACACACACACACAC	<15>,<19>,<20>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,9,7:16:255,255,255,129,129,82,165,165,0,118	1/3:0,11,0,12:25:255,255,255,255,208,255,255,0,255,255	2/2:0,0,22,0:22:255,255,255,66,66,0,255,255,65,255
+chr21	41778783	chr21:41778783:M	TTTTGTTTTTTTTTTTTTTT	<21>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,21,0:24:255,52,0,255,70,255	1/2:2,7,4:16:238,133,133,102,0,255	1/1:4,18,0:25:238,5,0,255,70,255
+chr21	41780812	chr21:41780812:M	AGAAAGAAAGGAAAGGAAGAAAGGAAGGAAAGGAAGAAAGAAAGAAAG	<14>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:4,4:9:76,0,72	0/1:5,8:13:164,0,79	0/0:20,0:20:0,60,255
+chr21	41780859	chr21:41780859:M	GGAGGGAGGGAGGGAG	<1.5>	.	.	Motif=GGAG	GT:AD:DP:PL	0/0:16,1:21:0,26,255	0/1:4,3:8:59,0,86	0/0:39,0:41:0,123,255
+chr21	41780953	chr21:41780953:M	AAGGAAGGAAGGAGGGGAGGGAGGAGAGGGAGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	<14.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/0:0,0:1:0,0,0	.	1/1:0,3:3:67,9,0
+chr21	41781016	chr21:41781016:M	AGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGG	<4.8>,<7.8>,<8.8>,<33.8>	.	.	Motif=AGGG	GT:AD:DP:PL	3/4:0,1,1,2,4:8:70,53,88,49,29,46,43,18,31,35,35,50,11,0,70	1/1:0,6,0,0,1:9:171,17,0,170,18,168,172,18,170,173,161,7,160,162,159	2/3:0,0,4,3,0:7:109,129,212,28,37,16,47,49,0,28,129,221,37,49,246
+chr21	41782244	chr21:41782244:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,28	0/1:2,3:5:64,0,39	0/0:5,0:5:0,15,137
+chr21	41783093	chr21:41783093:M	TTTTTTTTTTTGTTTTTTTTTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,12:24:255,211,255,255,0,255	1/2:0,9,10:22:255,176,224,238,0,196	2/2:0,0,26:27:255,255,255,79,78,0
+chr21	41784640	chr21:41784640:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:15:255,43,0	1/1:1,12:14:201,24,0	1/1:0,20:23:255,66,0
+chr21	41786173	chr21:41786173:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAAA	<41>,<44>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:7:158,75,63,83,0,74	1/2:0,9,5:14:255,117,90,225,0,210	1/1:0,11,0:11:255,33,0,255,33,255
+chr21	41787018	chr21:41787018:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,11,6:18:255,88,55,148,0,156	2/2:1,1,17:20:255,255,255,28,29,0	0/1:9,23,0:32:255,0,65,255,157,255
+chr21	41787320	chr21:41787320:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,14,1,3:20:255,72,40,255,53,255,255,0,255,255	1/2:2,12,7,0:23:255,83,179,255,0,255,255,209,255,255	3/3:0,0,0,6:6:187,187,187,182,182,178,18,18,18,0
+chr21	41790393	chr21:41790393:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:12:104,0,107	0/1:3,4:7:92,0,63	0/0:3,0:6:0,12,94
+chr21	41791048	chr21:41791048:M	TTTTTTTTGTTTGTTTTATTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,29:29:255,85,0	1/1:0,24:25:255,73,0
+chr21	41793165	chr21:41793165:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,6:14:255,117,80,109,0,88	2/2:0,0,18:20:255,255,255,60,58,0	1/1:0,14,1:15:255,44,0,237,26,234
+chr21	41794539	chr21:41794539:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,2:4:82,30,24,35,0,24	0/1:1,3,1:8:85,0,33,46,20,64	2/2:1,0,6:7:88,91,116,3,20,0
+chr21	41797812	chr21:41797812:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:4:28,0,6	0/0:4,0:4:0,12,67	1/1:0,5:8:99,18,0
+chr21	41798025	chr21:41798025:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:30:140,0,191	0/1:22,13:37:129,0,255	0/0:27,1:30:0,69,255
+chr21	41803964	chr21:41803964:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,11:15:157,0,29	0/1:9,12:21:145,0,95	1/1:0,23:27:255,75,0
+chr21	41805703	chr21:41805703:M	CACCACCATCACCACCATAAGCACCACCACCACCA	<45>	.	.	Motif=CAC	GT:AD:DP:PL	0/1:19,10:29:37,0,255	0/1:25,17:42:87,0,255	0/0:17,4:21:0,13,255
+chr21	41805810	chr21:41805810:M	CCATCACCATTACCAACACCATCACCACCAACACAACCACCTCCATCACCATTAACAACACCATCACCA	<4.5>,<10.5>	.	.	Motif=CCATCA	GT:AD:DP:PL	1/2:1,10,4:18:255,35,75,255,0,255	0/1:4,6,0:12:168,0,78,179,46,214	1/2:0,8,5:16:255,57,91,255,0,251
+chr21	41807064	chr21:41807064:M	ACCACCATCTCCACCACTACCTCCACCACCA	<45>	.	.	Motif=ACC	GT:AD:DP:PL	0/0:27,6:33:0,35,255	0/1:17,10:27:26,0,255	0/0:20,4:24:0,29,255
+chr21	41809228	chr21:41809228:M	TTTTTTCTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:20:0,41,255	0/1:6,5:11:53,0,71	0/0:19,0:19:0,56,255
+chr21	41811468	chr21:41811468:M	AAAATAAAATAAAATAAAATAAAATAAAATAA	<5.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:16,8:24:75,0,220	0/0:18,0:18:0,53,255
+chr21	41811681	chr21:41811681:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,8:14:255,144,105,88,0,53	1/2:0,8,5:15:255,86,43,152,0,115	1/1:0,15,0:15:255,45,0,255,44,255
+chr21	41816895	chr21:41816895:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,37:41:255,65,0	1/1:0,24:26:255,75,0	1/1:1,27:30:255,67,0
+chr21	41823030	chr21:41823030:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:21,0,103	0/0:5,0:7:0,17,94	0/1:5,3:8:29,0,63
+chr21	41836425	chr21:41836425:M	CCTGGCCCTGGCCC	<2.5>	.	.	Motif=CCTGGC	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:19,11:30:189,0,255	0/0:30,0:30:0,90,255
+chr21	41840443	chr21:41840443:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:10:93,0,23	0/1:7,4:11:35,0,85	0/1:1,3:5:47,0,3
+chr21	41843951	chr21:41843951:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,5:13:35,71,206,0,93,78	1/2:2,3,4:12:67,42,84,28,0,62	0/0:14,2,0:16:0,17,170,45,176,222
+chr21	41844415	chr21:41844415:M	ACACACACACACACACACACACACACACACACACACACACACACA	<16.5>,<17.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,5:10:194,149,194,75,133,119,133,75,0,119	1/1:0,5,0,0:7:147,14,0,86,14,73,139,5,77,136	0/2:1,0,4,0:6:116,69,83,0,26,12,119,83,15,131
+chr21	41844710	chr21:41844710:M	ACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:4:58,9,0	1/1:0,2:3:37,6,0	1/1:0,0:2:0,0,0
+chr21	41849560	chr21:41849560:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:29:208,0,146	0/1:19,19:39:226,0,218	1/1:0,42:44:255,129,0
+chr21	41863169	chr21:41863169:M	AAAAAGAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:28:46,0,255	0/0:22,0:24:0,59,255	0/1:14,3:18:1,0,202
+chr21	41868038	chr21:41868038:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:33:168,0,203	0/1:10,7:18:77,0,119	1/1:1,17:19:255,38,0
+chr21	41868677	chr21:41868677:M	TTTTCCTTTTTCTTTTTCTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTC	GT:AD:DP:PL	0/0:11,1:12:0,11,250	0/1:6,2:8:24,0,125	1/1:0,10:11:255,32,0
+chr21	41869440	chr21:41869440:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:8:94,5,0	0/1:3,4:7:49,0,31	0/1:7,2:9:9,0,99
+chr21	41874503	chr21:41874503:M	ATATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:1,0,11:12:55,90,252,18,35,0	1/2:0,2,8:13:30,32,142,11,0,13	1/2:0,3,2:6:47,11,27,46,0,52
+chr21	41874526	chr21:41874526:M	TTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:108,12,0	1/1:0,0:4:10,3,0	1/1:0,1:6:105,15,0
+chr21	41886660	chr21:41886660:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,94,0	0/1:20,13:35:134,0,244	1/1:2,39:43:255,90,0
+chr21	41889629	chr21:41889629:M	TTTTTTTTCTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,23:37:255,0,135	0/1:20,21:42:255,0,230	0/0:28,2:32:0,57,255
+chr21	41905311	chr21:41905311:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:72,0,104	0/1:5,6:12:124,0,101	1/1:0,6:6:156,18,0
+chr21	41908244	chr21:41908244:M	TGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/1:8,9:18:208,0,167	0/1:14,8:22:152,0,255
+chr21	41909999	chr21:41909999:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:14:0,39,255	0/1:10,21:33:255,0,193	0/1:13,15:34:255,0,255
+chr21	41911389	chr21:41911389:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/0:6,0:6:0,18,102	0/1:8,3:12:20,0,108
+chr21	41914295	chr21:41914295:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,2:19:0,20,255	0/1:7,13:22:160,0,75	0/1:14,10:27:106,0,189
+chr21	41916665	chr21:41916665:M	ACACACACACACACACACACACACACACACACACACACACAC	<17>,<18>,<20>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,1,27,0:28:255,255,255,84,64,0,255,255,84,255	2/3:0,3,14,9:26:255,255,255,153,189,185,255,187,0,255	1/2:0,14,6,0:20:255,107,48,248,0,190,255,106,248,255
+chr21	41921755	chr21:41921755:M	TGTGTGTGTGTGTAGTGTGTGTGTGTAATGTGTAGTGTGTGTG	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,21:21:255,62,0	0/1:15,13:28:154,0,188	1/1:0,27:27:255,80,0
+chr21	41922150	chr21:41922150:M	TCTTCTTCTTCTTCTT	<3.7>	.	.	Motif=TCT	GT:AD:DP:PL	1/1:0,5:7:134,21,0	0/1:15,3:20:4,0,255	1/1:0,3:5:92,15,0
+chr21	41922164	chr21:41922164:M	TTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,9:14:239,0,23	0/1:19,7:29:125,0,255	1/1:0,13:20:255,6,0
+chr21	41922239	chr21:41922239:M	ACCTCCACCTCC	<2.5>	.	.	Motif=ACCTCC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	0/1:18,15:33:255,0,255	1/1:0,42:42:255,126,0
+chr21	41922477	chr21:41922477:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26,2:29:255,81,0,255,48,255	1/2:0,12,11:24:255,162,124,217,0,153	1/1:0,26,0:27:255,81,0,255,79,255
+chr21	41923000	chr21:41923000:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,3:40:0,62,255	0/1:13,18:31:225,0,137	0/0:28,3:31:0,37,255
+chr21	41928545	chr21:41928545:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,7:8:208,120,98,24,7,0	0/2:0,0,3:5:71,49,61,0,14,2	1/2:0,4,4:8:209,64,41,65,0,41
+chr21	41929103	chr21:41929103:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,10:24:113,0,179	0/0:40,0:44:0,127,255	0/1:19,19:41:222,0,250
+chr21	41931427	chr21:41931427:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	1/1:0,6:6:104,18,0	0/1:13,9:22:95,0,166
+chr21	41933261	chr21:41933261:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	1/1:0,23:23:255,68,0	0/1:15,22:37:255,0,167
+chr21	41934857	chr21:41934857:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:33:255,0,255	0/0:29,0:31:0,90,255	0/1:16,17:35:255,0,255
+chr21	41936816	chr21:41936816:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,145	0/1:1,0:3:17,0,22	0/1:5,7:14:215,0,101
+chr21	41938743	chr21:41938743:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,9:16:135,0,43	0/0:13,2:16:0,12,198	0/1:4,7:13:96,0,42
+chr21	41944522	chr21:41944522:M	AAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,1:4:17,26,65,0,28,23	1/1:1,4,0:7:53,0,0,67,14,116	1/2:1,6,3:11:115,35,57,94,0,155
+chr21	41947113	chr21:41947113:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCTCTC	<33.8>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:0,3:4:26,0,0	1/1:0,4:4:49,11,0	0/1:0,4:6:35,0,2
+chr21	41954912	chr21:41954912:M	GTGTGTGTGGTGTGTGTGTGTGGTGTGTGTGTGTGATGTGT	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/0:16,0:16:0,48,255	0/1:10,11:21:255,0,204
+chr21	41956052	chr21:41956052:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,120,0	1/1:0,15:18:255,50,0	0/1:9,8:17:166,0,193
+chr21	41962113	chr21:41962113:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,79,0	1/1:2,21:23:255,33,0	1/1:1,31:36:255,84,0
+chr21	41968732	chr21:41968732:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:11:198,32,0	0/1:10,3:15:18,0,137	0/1:10,5:16:41,0,139
+chr21	41971967	chr21:41971967:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:37:0,91,255	0/0:40,0:42:0,122,255	0/1:19,13:34:140,0,255
+chr21	41978347	chr21:41978347:M	TTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,151	0/1:5,2:7:14,0,64	0/1:6,4:12:46,0,84
+chr21	41982836	chr21:41982836:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,49:53:255,100,0	1/1:1,37:39:255,97,0	1/1:2,39:43:255,80,0
+chr21	41986007	chr21:41986007:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:8,0,18	0/1:7,4:12:40,0,78	0/0:2,0:3:0,8,43
+chr21	41997576	chr21:41997576:M	AAAAAAAAAAAAAACAAAAAAACAAAAAAACAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:27,1:28:0,65,255	0/1:9,9:21:119,0,109
+chr21	42004005	chr21:42004005:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:21:0,43,255	0/0:18,4:25:0,2,255	0/1:8,8:16:98,0,98
+chr21	42008541	chr21:42008541:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAGAAAAGAAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:128,15,0	0/1:2,2:4:49,0,48	1/1:0,4:5:125,15,0
+chr21	42010439	chr21:42010439:M	GGGCGGGGCGGGGGGGG	<3.2>	.	.	Motif=GGGCG	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,15:15:255,45,0	0/1:8,5:13:62,0,123
+chr21	42011205	chr21:42011205:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:30:255,88,0	0/1:24,16:41:165,0,255	1/1:0,40:41:255,120,0
+chr21	42011707	chr21:42011707:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:35:0,83,255	0/0:26,0:27:0,79,255	0/1:17,17:35:206,0,216
+chr21	42014899	chr21:42014899:M	TTTGTTTTGTTTTGTTTTGTTTTGTTTTTGTTTT	<5.8>	.	.	Motif=TTTGT	GT:AD:DP:PL	1/1:0,37:37:255,110,0	1/1:0,35:35:255,103,0	1/1:0,42:42:255,124,0
+chr21	42015810	chr21:42015810:M	TGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,36:36:255,106,0	0/1:21,24:45:255,0,255
+chr21	42017479	chr21:42017479:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,1,9:12:155,124,144,14,8,0	2/2:4,5,21:30:255,231,255,18,2,0	1/2:0,6,13:20:255,189,168,113,0,58
+chr21	42024967	chr21:42024967:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<18>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,20:34:255,255,255,255,0,255	1/1:0,37,0:39:255,117,0,255,117,255	2/2:0,0,19:23:255,255,255,65,65,0
+chr21	42027690	chr21:42027690:M	TGTGTGTTTGTGGTGTGTGTGTGGTGTGATGTGGCATATGTTGTGTGTTGTGTGGTGTGTGTG	<32>	.	.	Motif=TG	GT:AD:DP:PL	0/0:6,0:8:0,15,50	0/0:7,1:8:0,11,50	0/1:10,5:15:6,0,47
+chr21	42032535	chr21:42032535:M	TTTTTTTTTTGTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:32,1:36:0,86,255	0/1:16,15:31:183,0,200
+chr21	42049131	chr21:42049131:M	CAAAAAAAAAAACAAAAACAAAAACAAAAA	<4.8>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:8,15:23:255,0,110	0/1:17,13:31:204,0,255	0/1:13,15:29:248,0,210
+chr21	42053867	chr21:42053867:M	TTTTTTTTTTTTTTTTGTATTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:26:177,0,255	0/1:11,4:16:71,0,249	0/1:14,5:21:76,0,255
+chr21	42069230	chr21:42069230:M	ACACACACACACACACACACACACACACACACACACACA	<25.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,5:18:111,130,255,0,255,255	0/2:12,0,2:16:40,59,255,0,255,255	0/1:11,5,0:20:112,0,255,151,255,255
+chr21	42072044	chr21:42072044:M	CAAACAAACAAACAAACAAACAAA	<7>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:22,21:46:255,0,255	0/1:25,14:40:136,0,255	0/1:20,15:38:190,0,255
+chr21	42073008	chr21:42073008:M	GTGTGTGTGTGTGTGCGCGCGCGCGTGTGTGTGTGTGCGTGTG	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,13:32:143,0,234	0/1:8,7:15:77,0,94	0/1:21,10:32:92,0,255
+chr21	42077003	chr21:42077003:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<26.5>,<30.5>,<31.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,3,0:11:225,68,53,161,0,152,200,39,161,191	1/3:0,7,0,4:13:243,50,73,243,50,243,203,0,203,192	2/2:0,0,5,0:8:152,156,167,22,20,0,106,103,21,90
+chr21	42092386	chr21:42092386:M	TTTTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:234,0,214	1/1:1,41:42:255,106,0	0/0:38,0:39:0,112,255
+chr21	42104409	chr21:42104409:M	TTTCTTTTCTTTTTTTCTTTTCTTTTTTTTCTTTTTCTTTTCTTTTCTTTTTTTT	<10.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:10,10:20:101,0,101	0/0:9,0:9:0,26,143	0/1:8,10:18:107,0,75
+chr21	42109124	chr21:42109124:M	ACCCCCACCCCC	<1.8>	.	.	Motif=ACCCCC	GT:AD:DP:PL	0/1:18,12:30:220,0,255	0/0:31,0:31:0,93,255	0/1:14,7:21:114,0,255
+chr21	42121369	chr21:42121369:M	GTGTGTGTGTGTGTGTGTGATGTATGTGT	<13.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,21:31:255,255,255,188,0,235	0/1:15,17,0:33:230,0,175,255,229,255	0/2:20,1,6:27:34,94,255,0,255,255
+chr21	42122565	chr21:42122565:M	GTGTGTGCGTGCGTGTGTGCATGTGTGTGCATGTGTGTG	<7.2>	.	.	Motif=GTGT	GT:AD:DP:PL	0/1:14,17:31:255,0,255	0/1:14,16:30:255,0,255	0/0:34,0:34:0,102,255
+chr21	42122633	chr21:42122633:M	GTGTGTGTACGTGTGTGTGCATATGTGTGCGTGTGTGTGTGTGTGTGTG	<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,8:20:81,0,150	0/1:9,10:19:110,0,91	0/0:17,0:17:0,50,255
+chr21	42123481	chr21:42123481:M	GTGTGTGTGTGTGAGTGT	<4>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,10:34:167,0,255	0/1:20,14:36:255,0,255	0/0:43,0:44:0,132,255
+chr21	42130222	chr21:42130222:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<14.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,21,14,0:35:255,255,158,255,0,255,255,221,255,255	1/3:2,16,1,20:39:255,255,255,255,255,255,246,0,255,255	2/3:0,0,22,15:37:255,255,255,255,255,164,255,255,0,255
+chr21	42133889	chr21:42133889:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTCGTTTTGTTTTGTTT	<11.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,19:20:255,57,0	1/1:0,12:12:255,36,0	1/1:0,34:34:255,102,0
+chr21	42134781	chr21:42134781:M	TTTTTTTTTTTTTTATATTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,9:17:255,173,217,128,0,150	1/1:0,24,0:25:255,73,0,255,75,255	1/2:0,11,3:14:215,53,43,197,0,255
+chr21	42138579	chr21:42138579:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,3:32:0,38,255	0/1:13,20:33:255,0,133	0/1:20,14:35:153,0,255
+chr21	42149269	chr21:42149269:M	AAATAAATAAGTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/2:0,0,14:14:255,255,255,41,42,0	1/2:0,6,3:9:199,53,62,156,0,150	1/2:0,9,7:16:255,128,153,234,0,216
+chr21	42161052	chr21:42161052:M	CACAACACACAGACACACAAAGACACGGACAGACACAGATACACACACAGACACACACACACACACACACACACACA	<35.5>,<37.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,16,0:17:255,51,0,255,51,255	1/2:0,7,3:11:233,55,54,178,0,164	1/2:0,6,3:9:200,54,58,153,0,142
+chr21	42161422	chr21:42161422:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,78,0	0/1:6,18:25:255,0,85	0/1:7,12:20:255,0,132
+chr21	42168322	chr21:42168322:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:52,0,11	1/1:0,5:6:94,17,0	1/1:0,4:4:68,12,0
+chr21	42175111	chr21:42175111:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:99,14,0	0/1:3,0:8:17,0,61	0/0:4,0:6:0,4,103
+chr21	42177137	chr21:42177137:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,8:14:208,98,110,60,0,40	0/0:1,0,0:2:0,3,29,3,19,17	1/2:0,0,2:4:38,27,25,9,0,4
+chr21	42185407	chr21:42185407:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,8:11:255,139,108,52,0,20	.	1/2:0,2,3:7:137,51,34,43,0,28
+chr21	42189419	chr21:42189419:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:27,24:51:255,0,255	0/1:17,27:44:255,0,180
+chr21	42192481	chr21:42192481:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:13,17:31:255,0,255	0/1:15,18:33:255,0,255
+chr21	42200597	chr21:42200597:M	TTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:28:0,83,255	0/1:9,5:16:97,0,206	0/0:13,0:16:0,28,255
+chr21	42206352	chr21:42206352:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:32,0:32:0,92,255	0/1:11,4:15:15,0,117	0/1:10,8:18:66,0,97
+chr21	42206874	chr21:42206874:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/1:19,14:34:147,0,245	0/1:19,18:40:223,0,241
+chr21	42210960	chr21:42210960:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:9:122,9,0	0/0:15,2:18:0,7,204	0/1:8,5:14:55,0,96
+chr21	42212706	chr21:42212706:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:4,5:10:109,0,78	0/1:12,6:20:112,0,255
+chr21	42219223	chr21:42219223:M	CCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC	<8.7>	.	.	Motif=CCG	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:13,9:22:189,0,255	0/1:18,18:37:255,0,255
+chr21	42241605	chr21:42241605:M	AAAAAAAAAAAATAACAAAAAAAAAACAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,17:31:255,0,255	0/0:22,0:22:0,66,255	0/1:11,15:28:255,0,213
+chr21	42241821	chr21:42241821:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:27:114,0,209	0/0:24,1:27:0,61,255	0/1:9,14:26:196,0,90
+chr21	42241978	chr21:42241978:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:13:0,29,166	0/1:10,4:15:34,0,122	0/0:7,1:9:0,9,111
+chr21	42243436	chr21:42243436:M	GTGTGTGTGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<24.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,7:18:255,122,152,255,0,243	2/2:0,0,13:16:254,255,255,46,39,0	1/2:0,6,9:15:255,153,214,158,0,128
+chr21	42268363	chr21:42268363:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,10:17:255,255,250,131,0,110	0/2:10,0,11:22:251,255,255,0,226,232	0/1:15,5,0:23:57,0,255,117,255,255
+chr21	42268389	chr21:42268389:M	GCGCGCGCGCGC	<7>	.	.	Motif=GC	GT:AD:DP:PL	1/1:0,12:14:207,40,0	0/1:14,7:25:74,0,142	0/0:21,0:21:0,61,255
+chr21	42270260	chr21:42270260:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:54,0,3	0/1:7,5:13:53,0,77	0/1:8,3:11:18,0,103
+chr21	42296625	chr21:42296625:M	TTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:28:248,255,255,0,243,255	1/2:1,18,16:38:255,255,255,255,0,255	0/1:24,17,0:44:193,0,255,255,255,255
+chr21	42300358	chr21:42300358:M	CACACGCACACACACACATGCACACACACTCACATGGACACACACATACACACACATACACACACATACATGCACACACA	<24>,<25>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,0,4:8:117,54,96,0,53,41	1/1:0,3,0:4:102,9,0,49,8,40	0/1:3,2,1:7:91,0,68,26,66,95
+chr21	42305366	chr21:42305366:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGTTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/1:12,21:33:255,0,120	0/1:16,9:25:95,0,227
+chr21	42320721	chr21:42320721:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,44:45:255,114,0	0/1:19,14:33:158,0,244	1/1:0,36:36:255,106,0
+chr21	42326738	chr21:42326738:M	AAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:37:255,110,0	1/1:0,27:35:255,102,0	1/1:0,33:39:255,114,0
+chr21	42327038	chr21:42327038:M	AAAAAAAAGAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:36:255,105,0	1/1:1,35:37:255,91,0	1/1:0,38:39:255,114,0
+chr21	42341434	chr21:42341434:M	TTTTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:1,7:9:120,9,0	0/1:4,7:11:94,0,39
+chr21	42342753	chr21:42342753:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<18>,<19>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:1,15,0:16:255,28,0,255,47,255	1/2:0,1,1:2:41,17,12,15,0,12	1/2:0,5,5:10:204,89,62,77,0,62
+chr21	42359401	chr21:42359401:M	TTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTT	<78>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:224,27,0	1/1:0,7:7:182,21,0	1/1:0,7:7:183,21,0
+chr21	42362901	chr21:42362901:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,5:9:64,0,38	1/1:1,13:18:245,34,0	0/1:5,5:10:58,0,59
+chr21	42368726	chr21:42368726:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/0:30,0:30:0,88,255	0/1:22,17:39:197,0,255
+chr21	42378871	chr21:42378871:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>,<8.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/2:0,10,14:24:255,255,255,191,0,224	0/2:8,1,6:15:66,90,255,0,105,114	1/2:0,12,5:17:255,93,96,223,0,255
+chr21	42384157	chr21:42384157:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17,0:40:218,0,255,255,255,255	0/2:9,1,14:24:175,225,255,0,115,97	0/1:19,22,1:43:255,0,227,255,255,255
+chr21	42385023	chr21:42385023:M	CCCTCCCTCTCTTCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCCCTTCCTC	<2.2>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:5,3:8:47,0,91	0/1:3,2:5:31,0,55	0/1:4,1:7:8,0,78
+chr21	42387372	chr21:42387372:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/2:16,0,8:25:160,210,255,0,255,255	0/0:16,0,0:16:0,47,255,48,255,255	1/2:1,13,7:22:255,164,141,214,0,255
+chr21	42392561	chr21:42392561:M	ATGAATGAATGA	<4>	.	.	Motif=ATGA	GT:AD:DP:PL	0/1:24,25:49:255,0,255	1/1:0,35:35:255,103,0	0/0:58,0:58:0,171,255
+chr21	42393245	chr21:42393245:M	AAGAAAAAGAAAAAAAAAAAG	<3.3>	.	.	Motif=AAGAAA	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,37:37:255,110,0	1/1:0,43:43:255,128,0
+chr21	42401268	chr21:42401268:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:23:84,0,178	0/1:12,9:23:87,0,157	0/0:14,1:16:0,29,238
+chr21	42401422	chr21:42401422:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:25:186,0,234	0/1:6,5:19:113,0,131	0/0:24,0:26:0,72,255
+chr21	42402099	chr21:42402099:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20:45:255,0,255	0/1:9,12:24:255,0,198	0/0:44,0:45:0,135,255
+chr21	42405984	chr21:42405984:M	GGGGGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:90,9,0	0/0:1,0:1:0,3,30	1/1:0,1:4:43,6,0
+chr21	42408884	chr21:42408884:M	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<14.8>,<15.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/2:0,3,7:10:242,135,107,50,0,29	2/2:0,0,0:1:0,0,0,0,0,0	1/1:0,6,0:6:114,18,0,114,18,114
+chr21	42410779	chr21:42410779:M	CACACACACACACACACAGATAGACACAGAGACACACACATAGCTCACACACATAGACACACACA	<8>,<9>,<31.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,4,0,6:16:70,0,215,63,227,255,9,0,63,70	2/3:3,1,3,4:12:91,56,171,25,137,141,40,30,0,63	0/2:14,0,6,0:20:115,93,255,0,255,255,156,255,218,255
+chr21	42417420	chr21:42417420:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:6:32,0,73	1/1:0,3:4:100,12,0	0/0:4,0:5:0,15,130
+chr21	42417860	chr21:42417860:M	TTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,3:5:70,0,10	1/1:0,1:1:29,3,0	0/0:1,0:1:0,3,30
+chr21	42447788	chr21:42447788:M	ACACACACACACACACACACACACACACAGGCACATACACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23,0:24:255,72,0,255,72,255	0/1:13,7,0:23:164,0,255,195,223,255	1/2:0,3,9:13:215,152,234,84,0,55
+chr21	42450511	chr21:42450511:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:209,3,0	0/1:9,4:14:74,0,197	1/1:0,6:6:161,18,0
+chr21	42458220	chr21:42458220:M	TATTATTATTATTATTATTATTATTATTATTATTA	<8.7>,<12.7>,<15.7>	.	.	Motif=TAT	GT:AD:DP:PL	1/2:0,20,10,0:30:255,190,221,255,0,255,255,255,255,255	1/2:0,13,3,0:16:255,54,45,255,0,255,255,84,255,255	1/3:0,18,0,8:26:255,225,171,255,225,255,255,0,255,255
+chr21	42463782	chr21:42463782:M	AAAAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19,0:34:255,0,255,255,255,255	0/1:6,17,1:32:255,0,143,255,113,255	1/2:1,14,13:33:255,218,255,255,0,255
+chr21	42464909	chr21:42464909:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,1:22:0,19,255	0/0:8,0:14:0,30,244	1/1:0,9:16:238,22,0
+chr21	42466459	chr21:42466459:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:255,36,0	1/1:0,17:21:255,51,0	0/0:0,0:2:0,0,0
+chr21	42470031	chr21:42470031:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1,0:33:0,79,255,97,255,255	0/2:12,1,15:28:184,244,255,0,161,143	0/1:12,17,0:29:227,0,135,255,186,255
+chr21	42473490	chr21:42473490:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:20:255,58,0	1/1:0,18:23:255,64,0	1/1:2,20:28:255,43,0
+chr21	42479727	chr21:42479727:M	ACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,6:19:255,108,54,200,0,182	0/1:14,13,0:28:143,0,171,188,248,255	1/2:0,15,10:25:255,176,105,225,0,194
+chr21	42480641	chr21:42480641:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:23,0,16	0/1:3,3:6:32,0,32	0/0:2,0:2:0,6,34
+chr21	42483990	chr21:42483990:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:30,20:50:238,0,255	0/1:14,16:30:201,0,165	0/1:37,23:60:255,0,255
+chr21	42494705	chr21:42494705:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13,1:29:192,0,150,246,173,255	0/2:5,0,9:14:118,157,255,0,74,47	0/1:17,9,0:26:88,0,235,162,255,255
+chr21	42503249	chr21:42503249:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,7:19:67,0,157	1/1:2,11:14:151,4,0	0/1:9,5:17:38,0,134
+chr21	42512077	chr21:42512077:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:2,36:39:255,79,0	1/1:0,51:52:255,153,0
+chr21	42519958	chr21:42519958:M	GTGTGTTTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:36:0,102,255	0/1:15,16:33:182,0,185	0/0:29,0:31:0,88,255
+chr21	42523898	chr21:42523898:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,20:43:247,0,255	1/1:1,27:29:255,67,0	0/1:13,21:36:255,0,141
+chr21	42530596	chr21:42530596:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<16>,<18>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,9:15:255,255,248,32,27,0	1/2:0,5,4:9:231,99,80,123,0,107	2/2:0,0,7:7:203,196,191,21,21,0
+chr21	42554983	chr21:42554983:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:14:0,40,207	0/1:6,6:13:63,0,49	0/1:14,5:24:11,0,175
+chr21	42557780	chr21:42557780:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,2:32:0,57,255	0/1:24,19:43:208,0,255	0/1:14,25:40:255,0,145
+chr21	42559876	chr21:42559876:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,1,3:15:39,36,193,0,180,255	1/2:0,3,6:9:187,100,76,43,0,25	0/2:11,1,5:17:87,70,217,0,176,255
+chr21	42572678	chr21:42572678:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:19,0,210	0/1:7,5:17:75,0,106	0/0:9,1:12:0,6,166
+chr21	42573340	chr21:42573340:M	TCCCCTCCCCT	<2.4>	.	.	Motif=TCCCC	GT:AD:DP:PL	0/1:24,16:40:255,0,255	0/1:9,16:25:255,0,159	0/1:19,21:40:255,0,255
+chr21	42586020	chr21:42586020:M	TATTATTATTATT	<3.7>	.	.	Motif=TAT	GT:AD:DP:PL	0/0:37,0:38:0,104,255	0/1:8,11:19:80,0,44	0/0:22,0:25:0,66,255
+chr21	42586031	chr21:42586031:M	TTTTTTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,0,21:40:255,255,255,0,255,255	0/1:5,11,0:18:255,0,100,255,133,255	0/2:11,0,11:27:253,255,255,0,255,255
+chr21	42597880	chr21:42597880:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1:20:0,41,255	0/1:13,12:26:131,0,138	0/0:28,1:30:0,70,255
+chr21	42605210	chr21:42605210:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,20:24:255,52,0	0/1:7,4:11:36,0,86	0/1:3,4:7:49,0,32
+chr21	42607028	chr21:42607028:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:72,12,0	1/1:0,10:11:171,29,0	0/1:10,7:19:70,0,134
+chr21	42608302	chr21:42608302:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,41:42:255,105,0	1/1:0,37:37:255,109,0	0/1:18,25:44:255,0,202
+chr21	42608462	chr21:42608462:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAATAAAA	<32>,<34>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:12:47,78,214,0,107,92	0/1:8,4,1:13:31,0,110,51,98,194	0/2:7,0,5:12:53,87,228,0,104,88
+chr21	42611084	chr21:42611084:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:11,6:19:49,0,153	0/0:16,0:18:0,52,255
+chr21	42612545	chr21:42612545:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,49:52:255,134,0	1/1:0,35:36:255,106,0	1/1:1,47:48:255,123,0
+chr21	42615907	chr21:42615907:M	CACACACAAATACACATACACCACACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,27:48:186,0,255	0/0:26,7:33:0,14,255	0/1:17,24:41:169,0,255
+chr21	42615966	chr21:42615966:M	ACACACACCACGCACCACCCCCACAGCACACAGAAACACATACACACCACACACACA	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,26:45:187,0,255	0/1:18,7:25:11,0,255	0/1:11,24:35:192,0,196
+chr21	42625228	chr21:42625228:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:2,27:31:255,53,0	1/1:0,29:29:255,85,0
+chr21	42639292	chr21:42639292:M	ACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/0:48,0:48:0,132,255	0/0:42,0:43:0,114,255	0/1:17,19:40:137,0,98
+chr21	42643307	chr21:42643307:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:29:255,65,0	1/1:3,27:31:255,38,0	1/1:0,41:45:255,131,0
+chr21	42648271	chr21:42648271:M	TTTTCTTTTTGTTTTTGTTTTTGTTTTTTTTTTT	<35>,<37>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,5:22:255,128,76,255,0,255	1/1:0,20,0:20:255,59,0,255,60,255	2/2:0,0,17:19:255,255,255,56,56,0
+chr21	42661035	chr21:42661035:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:22:49,0,255	0/1:17,10:31:205,0,255	0/0:30,0:33:0,95,255
+chr21	42670311	chr21:42670311:M	ACACCACACTCACATTCACAC	<4.5>	.	.	Motif=ACACTC	GT:AD:DP:PL	0/1:19,9:34:73,0,252	0/1:22,8:33:45,0,255	0/0:41,0:42:0,120,255
+chr21	42674317	chr21:42674317:M	TTTTTTTTTTTTTTTTT	<18>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,6:20:138,157,255,0,190,255	1/1:0,7,0:9:124,22,0,123,3,191	0/1:8,7,0:17:80,0,101,125,144,255
+chr21	42684983	chr21:42684983:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,25:45:255,0,243	0/1:28,12:43:139,0,255	0/0:42,0:42:0,124,255
+chr21	42693300	chr21:42693300:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,5:16:59,0,119	0/0:11,1:12:0,18,173	0/1:9,8:17:93,0,111
+chr21	42693962	chr21:42693962:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:222,0,255	0/1:21,22:43:255,0,247	0/0:43,0:43:0,127,255
+chr21	42701431	chr21:42701431:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:44:244,0,255	0/0:31,2:34:0,64,255	0/1:16,23:41:255,0,190
+chr21	42704434	chr21:42704434:M	ACACACACACACACACACACACACACACACACACACA	<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,9,4:16:219,88,76,140,0,227	0/2:9,0,3:15:53,84,226,0,167,242	0/1:10,8,0:20:81,0,137,138,189,255
+chr21	42710409	chr21:42710409:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:32:222,0,132	0/1:7,8:17:97,0,79	0/0:17,1:18:0,35,255
+chr21	42711254	chr21:42711254:M	TTTTGTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:21:12,0,230	0/1:9,15:27:199,0,87	0/0:34,0:36:0,105,255
+chr21	42713130	chr21:42713130:M	TTGTTTTTGTTTTTGTTTTTGTTTT	<5.2>	.	.	Motif=TTGTTT	GT:AD:DP:PL	0/1:24,22:46:255,0,255	0/1:18,10:28:99,0,245	0/0:36,0:36:0,106,255
+chr21	42714017	chr21:42714017:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,12:19:185,0,24	0/1:6,3:9:25,0,74	0/0:15,0:18:0,39,255
+chr21	42715189	chr21:42715189:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:109,18,0	0/1:3,3:7:42,0,31	0/1:6,5:14:51,0,81
+chr21	42717295	chr21:42717295:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:7:50,0,3,61,15,102	0/2:1,0,3:6:39,49,88,0,13,5	0/1:2,4,0:6:52,0,17,69,29,135
+chr21	42717544	chr21:42717544:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,75,0	0/1:17,14:35:255,0,255	0/1:29,11:43:174,0,255
+chr21	42717901	chr21:42717901:M	GTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTT	<11.5>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	0/1:16,14:30:255,0,255	0/1:14,7:21:126,0,255
+chr21	42719640	chr21:42719640:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:5,15:22:255,0,73	1/1:0,14:16:255,42,0
+chr21	42721972	chr21:42721972:M	TTTTTCTTTTCTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:32:255,94,0	0/1:13,18:32:235,0,137	0/1:15,26:41:255,0,154
+chr21	42726594	chr21:42726594:M	ATATATATATATATATATATATATATATATAT	<11.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,5,3:8:126,11,60,119,0,115	1/1:0,2,0:4:51,5,0,50,2,48	0/2:2,0,2:6:4,19,121,0,15,0
+chr21	42726625	chr21:42726625:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:96,5,0	.	1/1:0,0:3:37,8,0
+chr21	42727078	chr21:42727078:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:5:92,0,16	0/1:0,1:3:20,0,19	0/0:3,0:5:0,15,117
+chr21	42727490	chr21:42727490:M	TTTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:254,30,0	1/1:0,9:9:252,27,0	.
+chr21	42729000	chr21:42729000:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:11:56,0,73	0/1:9,5:14:43,0,110	0/0:32,1:35:0,82,255
+chr21	42740444	chr21:42740444:M	AAAAAAAAAAAAAGAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,23:37:255,0,144	0/1:11,13:25:159,0,115	0/1:10,12:23:153,0,109
+chr21	42740574	chr21:42740574:M	GATGGATGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAATGGATACATAGATGAATGGATGGAT	<15.8>,<16.8>	.	.	Motif=GATG	GT:AD:DP:PL	1/2:0,9,7:16:255,114,68,146,0,101	1/2:0,3,5:10:198,81,58,49,0,26	1/2:0,6,3:11:226,48,23,98,0,72
+chr21	42740705	chr21:42740705:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAACAGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<12.5>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:0,1:1:37,3,0	.	1/1:0,4:4:152,12,0
+chr21	42751745	chr21:42751745:M	TTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:137,17,0	1/1:0,8:9:206,24,0	1/1:0,5:6:130,15,0
+chr21	42754187	chr21:42754187:M	AAAAAAAAAAACAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,14:35:155,0,255	0/1:25,19:45:210,0,255	1/1:0,49:50:255,147,0
+chr21	42759383	chr21:42759383:M	GTGTGTGTGTGTGTGGGAGCGTGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,7:11:184,0,75	0/1:8,6:16:141,0,174	0/0:27,0:27:0,81,255
+chr21	42768125	chr21:42768125:M	AGCAGCAGCAGCAG	<4.3>	.	.	Motif=AGC	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,25:25:255,75,0	1/1:0,27:27:255,81,0
+chr21	42769549	chr21:42769549:M	CACACACAGGCACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:1,3:5:97,0,23	0/1:3,4:7:117,0,83	1/1:0,14:14:255,42,0
+chr21	42774882	chr21:42774882:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3:17:40,0,255	0/1:1,5:9:145,0,16	0/0:8,0:13:0,38,255
+chr21	42776849	chr21:42776849:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:10:111,0,80	0/0:14,0:15:0,44,255	1/1:0,15:17:255,50,0
+chr21	42780026	chr21:42780026:M	TCTCTCTCTCTCTCTCTCGCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:14,24:38:255,0,255	0/0:35,0:37:0,105,255
+chr21	42780166	chr21:42780166:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:49,1:51:0,131,255	0/0:37,1:38:0,94,255	0/1:26,13:42:123,0,255
+chr21	42780416	chr21:42780416:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/1:12,17:29:215,0,126	0/0:32,1:34:0,81,255
+chr21	42787797	chr21:42787797:M	ATTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<13.8>,<14.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,7,0:17:163,0,237,125,255,255	0/1:3,3,0:6:74,0,67,51,78,122	0/2:7,0,6:13:157,106,255,0,182,168
+chr21	42788160	chr21:42788160:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:32:83,0,255	0/1:16,16:32:188,0,188	0/0:23,3:26:0,22,255
+chr21	42788306	chr21:42788306:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:23:96,0,188	0/1:10,12:22:142,0,109	0/1:12,9:24:111,0,147
+chr21	42795971	chr21:42795971:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:6:0,4,58	0/1:2,3:7:50,0,13	0/1:4,2:6:16,0,50
+chr21	42798803	chr21:42798803:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:12:92,0,47	0/1:12,4:18:17,0,173	1/1:2,23:25:255,38,0
+chr21	42800401	chr21:42800401:M	TGGTGGTGGTGGTGGTGGTGGTGGTGGTG	<7.7>	.	.	Motif=TGG	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,31:31:255,93,0	1/1:0,35:35:255,105,0
+chr21	42809780	chr21:42809780:M	CACATGCACAGGTACACATGCACAGGCACATACATGCACA	<5.3>	.	.	Motif=CACATG	GT:AD:DP:PL	0/1:19,4:23:2,0,255	0/0:24,2:26:0,43,255	0/1:18,6:24:34,0,247
+chr21	42809815	chr21:42809815:M	GCACACACACAGGCACACACTCGCACACGCACAGGCACGCACGCACACTCACATGCACACACGCACAAGCACAC	<8.7>	.	.	Motif=GCACAC	GT:AD:DP:PL	0/1:3,14:17:255,0,31	1/1:0,18:19:255,54,0	0/1:5,11:17:255,0,74
+chr21	42811264	chr21:42811264:M	TTTTTTTTAATTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,7:13:94,0,56	0/1:4,14:19:201,0,14	0/0:16,1:18:0,35,255
+chr21	42822490	chr21:42822490:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,5:27:11,0,255	0/1:17,10:29:110,0,207	0/0:31,3:35:0,49,255
+chr21	42824262	chr21:42824262:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,2:39:0,80,255	0/1:26,19:46:172,0,255	0/0:33,1:36:0,88,255
+chr21	42824756	chr21:42824756:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,13:27:151,0,153	1/1:2,11:14:159,7,0	0/1:8,13:23:177,0,72
+chr21	42824772	chr21:42824772:M	AAAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAGAGAGAAAGAGATAGAAAAAAAAGAAAAGAGAGAGAAAGAA	<18>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:1,1:4:17,0,10	0/1:2,3:5:40,0,22	0/0:7,0:7:0,21,129
+chr21	42824865	chr21:42824865:M	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	<8.5>,<12.5>	.	.	Motif=AGGA	GT:AD:DP:PL	0/2:5,0,14:21:255,255,255,0,73,101	0/0:18,0,0:18:0,50,227,54,255,255	1/2:1,14,10:27:255,227,210,157,0,255
+chr21	42827446	chr21:42827446:M	ATAGATAGATAGATAGATAGAT	<6.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,42:42:255,124,0	1/1:0,40:42:255,118,0
+chr21	42828695	chr21:42828695:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,35:36:255,105,0	1/1:0,35:38:255,108,0
+chr21	42830326	chr21:42830326:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,18:27:233,0,77	0/1:10,9:20:100,0,107	0/0:33,1:35:0,85,255
+chr21	42831402	chr21:42831402:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,11:21:234,165,255,88,0,130	1/1:0,13,1:15:226,34,0,247,18,255	1/2:1,7,13:22:255,217,255,105,0,131
+chr21	42832171	chr21:42832171:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,14:15:255,236,233,44,26,0	0/2:2,1,5:8:72,54,100,0,17,11	1/2:1,7,12:21:255,159,162,105,0,65
+chr21	42833820	chr21:42833820:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:25:0,65,255	0/1:10,7:23:58,0,145	0/1:17,5:24:16,0,225
+chr21	42836036	chr21:42836036:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,3:48:0,86,255	0/1:16,30:50:255,0,149	0/0:37,1:38:0,94,255
+chr21	42840650	chr21:42840650:M	TGTGTGCGTATGTGGTGTGGTGTGTGTAGTGTAATGTGTGGTGTGTATGTG	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,18:26:255,0,139	0/1:13,12:25:255,0,255	0/1:12,17:29:255,0,236
+chr21	42843407	chr21:42843407:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,14	1/1:0,0:5:29,6,0	1/1:0,4:4:124,12,0
+chr21	42847038	chr21:42847038:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,43:43:255,126,0	1/1:0,49:49:255,145,0
+chr21	42848344	chr21:42848344:M	CACACACACACA	<5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:13,7:20:68,0,175	0/0:42,0:42:0,124,255
+chr21	42849095	chr21:42849095:M	CACACACACACACA	<5>,<8>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,1:8:255,20,10,255,0,255	2/2:0,0,7:7:130,151,255,21,21,0	1/1:0,7,0:7:255,21,0,255,21,255
+chr21	42852916	chr21:42852916:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:21:106,0,143	1/1:2,19:22:255,20,0	0/1:13,12:27:154,0,156
+chr21	42855128	chr21:42855128:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:14:95,0,67	0/1:6,21:28:255,0,21	0/1:13,13:30:162,0,161
+chr21	42864108	chr21:42864108:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAA	<18>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0,0:1:0,3,28,3,20,17	1/1:0,6,0:7:179,21,0,179,21,179	2/2:0,0,3:3:49,57,80,9,9,0
+chr21	42870014	chr21:42870014:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,44,255	0/1:10,11:21:127,0,111	0/0:24,0:24:0,70,255
+chr21	42871991	chr21:42871991:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:223,0,255	1/1:0,33:33:255,97,0	0/1:11,16:27:217,0,124
+chr21	42876824	chr21:42876824:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/1:18,21:39:255,0,206	0/0:44,0:44:0,130,255
+chr21	42877139	chr21:42877139:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:5:32,0,21	1/1:0,7:7:117,20,0	0/1:2,1:4:15,0,23
+chr21	42877473	chr21:42877473:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:17,1,11:30:115,170,255,0,234,236	0/1:3,17,2:25:238,0,5,255,2,255	0/0:22,2,2:26:0,40,255,40,255,255
+chr21	42878042	chr21:42878042:M	AAAAAAAAAAAAAAAGAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,2:13:0,2,152	1/1:1,14:15:221,27,0	0/1:7,5:14:47,0,100
+chr21	42880935	chr21:42880935:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:23:118,0,175	1/1:1,10:14:191,23,0	0/1:13,9:24:94,0,186
+chr21	42881399	chr21:42881399:M	GTTTGTTTGTTTGTTTGTTT	<4>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:20,18:38:215,0,252	0/0:35,0:35:0,103,255
+chr21	42883275	chr21:42883275:M	AAAAAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:13:104,0,35	1/1:0,16:16:255,47,0	0/1:10,4:15:26,0,141
+chr21	42883315	chr21:42883315:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:16:0,29,243	0/0:16,1:18:0,35,255	0/1:6,14:20:187,0,47
+chr21	42887295	chr21:42887295:M	TTTTTTTTTTTTTTTTTTTTATTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:16:0,28,229	0/1:13,5:18:32,0,167	0/1:17,4:21:8,0,233
+chr21	42892254	chr21:42892254:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,13,0:21:255,0,167,232,143,255	1/2:0,16,12:30:255,173,120,255,0,211	0/1:10,16,1:28:255,0,202,255,159,255
+chr21	42895979	chr21:42895979:M	TTTTTCTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,4:18:28,0,167	0/1:2,2:5:28,0,20	0/1:13,6:20:56,0,172
+chr21	42896152	chr21:42896152:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,0,4,0:10:87,69,222,0,163,152,69,219,160,216	1/2:0,4,1,0:5:132,17,2,67,0,53,120,14,66,115	0/3:2,0,0,6:8:147,153,207,102,156,140,0,53,53,34
+chr21	42897407	chr21:42897407:M	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<6.4>	.	.	Motif=TTTGT	GT:AD:DP:PL	0/1:12,13:25:178,0,158	1/1:0,28:28:255,82,0	0/0:33,0:33:0,97,255
+chr21	42899439	chr21:42899439:M	TTTTTTGTTTTTTTGTTTTGTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:25:138,0,197	1/1:0,33:33:255,97,0	0/1:13,16:29:215,0,159
+chr21	42904492	chr21:42904492:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,1:7:0,2,90	0/1:3,6:9:77,0,25	0/1:9,3:14:25,0,121
+chr21	42905864	chr21:42905864:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,9,0:17:206,0,174,162,143,255	1/1:0,24,1:27:255,75,0,255,59,255	0/2:14,3,12:30:165,119,255,0,185,167
+chr21	42907449	chr21:42907449:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4,1:13:91,0,171,64,110,157	1/1:1,9,0:12:254,8,0,178,24,167	0/2:9,0,7:16:78,105,255,0,158,113
+chr21	42909137	chr21:42909137:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,4:8:50,0,31	1/1:0,0:2:22,5,0	0/1:1,1:3:8,0,21
+chr21	42912892	chr21:42912892:M	AAAAAAAAAAAACAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/1:7,8:15:94,0,77	0/0:21,0:21:0,62,255
+chr21	42914286	chr21:42914286:M	AAAAAAAAAAAAAAGAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,17:23:246,0,43	1/1:1,27:29:255,68,0	0/1:14,11:26:122,0,184
+chr21	42924949	chr21:42924949:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,1,4:18:61,56,240,0,212,255	1/2:0,2,9:11:255,156,126,30,0,3	0/1:14,12,1:27:148,0,176,166,233,255
+chr21	42926241	chr21:42926241:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,17:35:216,0,236	1/1:0,29:29:255,85,0	0/1:21,12:33:123,0,255
+chr21	42928557	chr21:42928557:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAA	<39>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0,0:4:0,12,114,12,114,114	1/2:0,3,2:5:123,34,19,50,0,36	0/2:5,1,3:9:66,34,147,0,107,113
+chr21	42929186	chr21:42929186:M	TTTCTTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTTTTTC	<15>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:13,6:19:90,0,255	0/1:2,17:20:255,0,3	0/1:15,7:22:106,0,255
+chr21	42933401	chr21:42933401:M	AAAGAGAGAAGAAAAAGAGAAAGAGA	<4.5>	.	.	Motif=AAAGAG	GT:AD:DP:PL	0/1:21,19:40:255,0,255	1/1:0,32:32:255,96,0	0/1:24,21:45:255,0,255
+chr21	42933679	chr21:42933679:M	AAAAAAAAGTAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:9:25,0,76	.	0/0:14,2:17:0,7,191
+chr21	42939258	chr21:42939258:M	TTTTTTGTTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:4:80,11,0	1/1:0,2:3:71,9,0	1/1:0,4:5:129,15,0
+chr21	42948050	chr21:42948050:M	TTTTTTTTTTTTTT	<11>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:25,0,22:49:255,255,255,0,255,255	0/2:19,0,20:41:242,255,255,0,255,225	1/2:1,18,14:37:255,250,255,255,0,255
+chr21	42956741	chr21:42956741:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,6:10:74,0,33	1/1:1,14:17:235,33,0	1/1:1,4:8:74,4,0
+chr21	42958065	chr21:42958065:M	GAGAGAGAGAGAGA	<8>	.	.	Motif=GA	GT:AD:DP:PL	0/1:9,12:21:170,0,110	0/1:13,14:27:172,0,156	0/0:24,0:24:0,71,255
+chr21	42958896	chr21:42958896:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:26:250,0,255	0/1:6,4:14:72,0,139	0/0:30,0:32:0,95,255
+chr21	42959404	chr21:42959404:M	ATTATTATTATTATTATTATTATTCTTATT	<9.7>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:9,8:26:20,2,0	0/1:15,9:33:14,0,9	0/0:22,5:35:0,5,37
+chr21	42960020	chr21:42960020:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:34:255,96,0	1/1:0,24:27:255,78,0	1/1:2,31:37:255,70,0
+chr21	42962840	chr21:42962840:M	TTTTCTTTTCTTTTCTTTTCT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:7,6:13:76,0,95	0/1:9,6:15:63,0,118	0/0:19,0:19:0,56,255
+chr21	42966421	chr21:42966421:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:23:145,0,135	0/1:12,3:15:8,0,165	1/1:1,23:24:255,53,0
+chr21	42966775	chr21:42966775:M	TTTTTTTTTTTTTTTTTT	<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,3:11:187,36,65,143,0,151	0/1:2,11,2:17:255,0,30,255,0,255	2/2:1,0,10:13:163,196,255,11,35,0
+chr21	42969908	chr21:42969908:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:24:255,46,0	1/1:0,13:13:223,38,0	1/1:1,20:22:255,46,0
+chr21	42975046	chr21:42975046:M	GCGGGGCGGGG	<3.4>	.	.	Motif=GCGGG	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,12:12:255,36,0	1/1:0,16:16:255,48,0
+chr21	42977538	chr21:42977538:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:81,9,0	1/1:0,3:5:84,5,0	1/1:0,1:1:27,3,0
+chr21	42978469	chr21:42978469:M	TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:17:130,0,195	0/1:4,2:8:31,0,108	0/1:7,4:14:97,0,153
+chr21	42982732	chr21:42982732:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,5:19:255,88,34,210,0,195	1/2:1,15,5:21:255,67,24,195,0,206	1/2:2,6,5:14:182,59,57,53,0,86
+chr21	42984066	chr21:42984066:M	GTGTGTGCGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,23:24:255,71,0	1/1:0,23:23:255,69,0	1/1:0,27:27:255,81,0
+chr21	42984965	chr21:42984965:M	TTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:60,11,0	.	1/1:0,0:1:10,3,0
+chr21	42986003	chr21:42986003:M	AAAAAAAAAAAAAAATTAAAAAAAAAA	<29>,<30>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,9,7:16:255,126,80,161,0,117	1/2:0,14,7:21:255,120,59,239,0,180	1/1:0,10,0:11:255,30,0,207,32,189
+chr21	42987383	chr21:42987383:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:65,8,0	.	1/1:0,3:7:121,5,0
+chr21	42987405	chr21:42987405:M	ATATATATATATATATATATATATGTATA	<13>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,4:12:86,0,104	0/0:8,0:9:0,26,213	0/1:7,3:12:50,0,156
+chr21	42987619	chr21:42987619:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:17:233,13,0	1/1:0,8:9:141,24,0	0/1:7,3:10:25,0,97
+chr21	42988049	chr21:42988049:M	TTTTTGTTTTTGTTTTTGTTTTTG	<3.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	1/1:0,9:9:232,27,0	1/1:0,11:11:255,33,0	1/1:0,2:2:52,6,0
+chr21	42990097	chr21:42990097:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:4,23:28:255,12,0	1/1:2,28:30:255,52,0
+chr21	42991734	chr21:42991734:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:1,21:22:255,47,0	1/1:1,32:36:255,87,0
+chr21	42993651	chr21:42993651:M	TTTTTTTTGTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,6:10:255,109,80,73,0,44	1/2:0,6,7:14:255,121,81,115,0,76	1/2:0,14,1:21:255,70,20,255,0,201
+chr21	42993726	chr21:42993726:M	TTTTTTTTTCTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,10:28:255,182,102,255,0,233	1/2:0,10,5:17:255,87,37,200,0,154	1/2:0,10,6:19:255,108,53,216,0,166
+chr21	42994032	chr21:42994032:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:1,1,0	0/1:1,2:6:59,0,17	1/1:0,3:3:86,9,0
+chr21	42994892	chr21:42994892:M	TTTCTTTTCTTTTCTTTTTCTTTCTTCTTTTTTTTTTTTTTTTTTTT	<7.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	1/1:0,4:7:94,6,0	0/1:1,2:5:39,0,24	0/1:1,2:4:41,0,18
+chr21	42996892	chr21:42996892:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20:22:255,27,0	1/1:2,30:33:255,52,0	0/1:23,21:44:254,0,255
+chr21	42999475	chr21:42999475:M	TTTTCTTTTCTTTTTTTTTCTTTT	<3.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:10,0:10:0,30,193	0/0:14,0:14:0,41,253	1/1:0,22:22:255,65,0
+chr21	43001961	chr21:43001961:M	AAATAAATAAATAAATAAATAAATAAA	<6.2>,<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:1,4,34:53:255,255,255,92,0,37	1/2:1,9,17:36:255,144,255,173,0,181	1/2:0,4,26:40:255,235,255,126,0,84
+chr21	43005535	chr21:43005535:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,26:28:255,63,0	1/1:1,37:41:255,102,0	0/1:16,20:36:255,0,188
+chr21	43008062	chr21:43008062:M	CACACACACACACACACACACACACACACACACACA	<16>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,27,0:28:255,81,0,255,84,255	1/1:0,16,0:24:255,51,0,255,41,255	1/2:0,14,11:28:255,255,255,255,0,255
+chr21	43009611	chr21:43009611:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:35,6,0	0/1:1,3:6:44,0,11	0/1:0,1:3:12,0,5
+chr21	43011067	chr21:43011067:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:7:79,2,0	1/1:1,4:6:62,0,0	1/1:0,11:12:204,35,0
+chr21	43019085	chr21:43019085:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:25:144,0,146	0/1:7,11:18:137,0,68	0/1:6,9:16:116,0,62
+chr21	43019926	chr21:43019926:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,2:5:138,36,21,54,0,39	1/2:0,3,0:6:86,0,7,55,0,46	2/2:0,0,5:6:154,88,71,17,1,0
+chr21	43023630	chr21:43023630:M	TTTTTTTTTTTTATTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14:30:187,0,177	0/1:15,18:33:224,0,171	0/1:13,19:32:255,0,146
+chr21	43028450	chr21:43028450:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,16:32:255,255,255,255,0,255	1/2:1,13,26:40:255,255,255,213,0,255	1/2:4,23,21:48:255,255,255,255,0,255
+chr21	43029396	chr21:43029396:M	TTTTTATTTTTTTTTATTTGTTTGCTTTGTTTTTTTTTTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:10:193,26,0	1/1:0,3:5:105,14,0	1/1:0,10:12:255,36,0
+chr21	43030261	chr21:43030261:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTG	<17.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,8,9:17:255,235,211,211,0,184	1/2:0,12,11:23:255,255,253,255,0,255	1/2:0,18,16:36:255,255,255,255,0,255
+chr21	43034832	chr21:43034832:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:30:220,0,138	0/1:26,11:37:84,0,255	0/1:24,22:46:255,0,255
+chr21	43035876	chr21:43035876:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAA	<15.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,3:5:91,9,0	1/1:0,2:3:62,6,0	1/1:0,0:2:11,3,0
+chr21	43052881	chr21:43052881:M	AAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:12:206,0,37	0/1:2,4:8:108,0,46	0/0:0,0:1:0,0,1
+chr21	43053773	chr21:43053773:M	GCCAGGCCAGGC	<1.4>	.	.	Motif=GCCAG	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:19,0:19:0,56,255	0/1:11,7:18:79,0,154
+chr21	43061241	chr21:43061241:M	TTTTCTTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:19:168,0,74	0/1:3,6:11:74,0,42	0/0:18,0:18:0,53,255
+chr21	43061415	chr21:43061415:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:8:0,23,128	0/1:1,1:3:9,0,19	0/1:10,4:14:30,0,137
+chr21	43151297	chr21:43151297:M	CATCCATCCATCCATCCATCCATCCATCCATCCATCCAT	<10.8>	.	.	Motif=CATC	GT:AD:DP:PL	0/0:19,0:19:0,56,255	1/1:0,10:10:183,29,0	0/1:19,13:32:152,0,255
+chr21	43153264	chr21:43153264:M	TTTTTCGTTTTTGTTTTTGTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:4,3:8:33,0,52	0/0:5,0:5:0,15,91	0/1:3,1:4:6,0,43
+chr21	43164478	chr21:43164478:M	TTTTTTTTTTTTTTCTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,14,84	0/0:21,2:25:0,38,255	0/1:1,8:11:112,0,7
+chr21	43167835	chr21:43167835:M	AATAATAATAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:14,0:14:0,42,255	0/0:15,0:15:0,45,255	0/1:7,9:16:214,0,148
+chr21	43179973	chr21:43179973:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:9,5:14:51,0,122	0/0:19,0:19:0,56,255
+chr21	43180141	chr21:43180141:M	TGTGTGTGTGTGTGTGGGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:7,0:7:0,21,134	0/0:16,0:16:0,47,255	1/1:0,3:3:56,9,0
+chr21	43184262	chr21:43184262:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:14:51,0,124	0/0:15,0:15:0,44,255	1/1:0,21:21:255,62,0
+chr21	43189691	chr21:43189691:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,35:38:255,76,0	1/1:1,24:25:255,56,0	0/1:16,15:32:171,0,188
+chr21	43190666	chr21:43190666:M	TTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,21:34:255,255,255,218,0,255	2/2:0,0,24:27:255,255,255,80,75,0	1/1:1,40,0:41:255,103,0,255,123,255
+chr21	43196331	chr21:43196331:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:2,31:34:255,53,0	0/1:21,27:49:255,0,240
+chr21	43198012	chr21:43198012:M	AAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:143,0,182	0/0:30,1:32:0,76,255	0/1:16,11:27:118,0,209
+chr21	43294100	chr21:43294100:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,14:23:255,255,191,165,0,99	0/2:13,1,10:25:243,164,255,0,255,255	1/1:0,32,0:33:255,96,0,255,97,255
+chr21	43298612	chr21:43298612:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,35:36:255,87,0	0/1:24,18:42:203,0,255	1/1:0,35:35:255,103,0
+chr21	43351329	chr21:43351329:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>,<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,12,0,0:29:255,217,131,255,0,217,255,182,255,255,255,216,255,255,255	1/3:0,13,1,13,0:27:255,255,255,255,205,255,255,0,205,255,255,223,255,255,255	2/4:0,1,11,0,8:20:255,255,255,230,211,187,255,255,139,255,255,174,0,203,255
+chr21	43357368	chr21:43357368:M	AATAATAATAATAATAATAATAATAATAATAATAATAATAA	<10.7>,<16.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:11,17,0:28:255,0,240,255,255,255	1/1:0,22,0:22:255,66,0,255,66,255	0/2:11,0,9:20:214,247,255,0,255,255
+chr21	43360515	chr21:43360515:M	GTGTGTGTGTGTG	<5.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,11:22:157,0,129	1/1:0,30:30:255,88,0	0/0:33,0:33:0,97,255
+chr21	43368635	chr21:43368635:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,22:45:255,0,255	0/1:21,19:40:220,0,255	0/0:49,0:49:0,144,255
+chr21	43369104	chr21:43369104:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,25:47:255,0,255	0/1:14,13:27:154,0,171	0/0:43,3:47:0,83,255
+chr21	43377297	chr21:43377297:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:75,14,0	0/0:11,0:12:0,35,184	1/1:3,16:20:222,9,0
+chr21	43405254	chr21:43405254:M	TATATATATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:5,0:5:0,15,81	1/1:0,7:9:121,23,0	0/0:23,1:25:0,56,255
+chr21	43440284	chr21:43440284:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>	.	.	Motif=TG	GT:AD:DP:PL	.	1/1:0,4:4:111,12,0	.
+chr21	43465111	chr21:43465111:M	GGGGGGGGGTGGGGGGG	<16>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:57,9,0	0/1:1,2:3:27,0,9	1/1:0,10:10:184,29,0
+chr21	43468205	chr21:43468205:M	ACACACCACACACCACACACCCCACATACCTCCCACACACACCATACACACACAC	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,12:17:100,0,88	0/1:4,8:12:63,0,75	1/1:1,11:12:108,6,0
+chr21	43468430	chr21:43468430:M	CACACAACCACATACACTACACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:7,12:19:90,0,135	0/1:8,8:16:49,0,170	0/1:6,11:17:83,0,114
+chr21	43468503	chr21:43468503:M	CACACACACCACACACCTCACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:4,12:16:99,0,64	0/1:7,8:15:52,0,147	0/1:2,11:13:95,0,18
+chr21	43468575	chr21:43468575:M	TGTGTGTGTGTGTGGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,25:43:177,0,255	0/1:17,11:28:51,0,255	0/1:21,11:32:38,0,255
+chr21	43468662	chr21:43468662:M	GTGTGTGGTGTGTATATGTGTGTGGGGTATGTGTGTGTGTGGTGTGTGCGTGT	<67.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:3,25:28:207,0,1	0/1:3,11:14:86,0,49	0/1:4,11:15:83,0,64
+chr21	43497651	chr21:43497651:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,9:13:129,0,37	0/1:5,8:13:103,0,50	0/1:10,11:21:139,0,121
+chr21	43518130	chr21:43518130:M	CACAGTCACACACAAAGACACACACACACACACACACACACACACACACACACACAGAGACAGACACAGA	<1.7>	.	.	Motif=CACAGA	GT:AD:DP:PL	0/1:2,2:5:44,0,48	0/1:1,1:4:18,0,36	0/1:1,3:6:71,0,23
+chr21	43533147	chr21:43533147:M	AAACAAACAAACAAACAAACAAACAAACAAACAAA	<7.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:6,3:9:31,0,90	0/1:8,8:17:98,0,98	0/1:8,10:18:135,0,97
+chr21	43542110	chr21:43542110:M	AAAAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,4:8:211,72,101,125,0,107	0/1:4,7,1:14:254,0,107,189,45,227	1/2:0,9,3:13:255,56,71,255,0,238
+chr21	43548107	chr21:43548107:M	AAAAAAAAACAACAACAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:17:160,0,62	0/1:3,5:9:64,0,36	0/1:7,6:14:76,0,87
+chr21	43554760	chr21:43554760:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4,1:9:99,0,62,53,63,127	0/1:9,2,0:12:17,0,222,32,233,255	0/2:4,1,3:8:70,33,121,0,84,91
+chr21	43558011	chr21:43558011:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,9:14:124,0,50	0/1:9,10:20:126,0,97	0/1:6,7:14:85,0,76
+chr21	43576119	chr21:43576119:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,11:12:202,176,173,35,18,0	1/2:0,3,8:13:201,109,95,66,0,34	1/2:1,5,8:14:215,96,106,67,0,44
+chr21	43587666	chr21:43587666:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:9:16,0,64	0/1:4,3:8:27,0,55	0/1:6,3:11:31,0,81
+chr21	43596887	chr21:43596887:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:12:126,0,98	0/1:5,7:18:142,0,125	0/1:4,6:10:123,0,78
+chr21	43598382	chr21:43598382:M	TTTTTTTGTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,16:25:255,0,129	0/1:8,4:14:67,0,195	0/1:12,15:31:255,0,239
+chr21	43599868	chr21:43599868:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,7:27:69,0,241	0/1:11,3:17:2,0,174	0/1:10,7:17:75,0,128
+chr21	43610436	chr21:43610436:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,28:31:255,55,0	0/1:2,8:13:100,0,34	1/1:1,15:17:247,29,0
+chr21	43616042	chr21:43616042:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:35:183,0,123	0/1:13,13:32:102,0,133	0/1:21,2:30:33,0,221
+chr21	43616053	chr21:43616053:M	ATATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/0:35,0:38:0,111,255	0/1:17,10:28:170,0,255	0/1:17,9:31:130,0,255
+chr21	43616931	chr21:43616931:M	AAAAAAAAAAGAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:30,18:50:255,0,255	0/1:18,21:40:255,0,255	0/1:23,15:40:232,0,255
+chr21	43622971	chr21:43622971:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,21:39:255,0,202	0/1:23,22:45:254,0,255	0/1:15,22:37:255,0,164
+chr21	43626868	chr21:43626868:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,20:43:254,0,255	0/1:10,21:34:255,0,77	0/1:13,26:39:255,0,121
+chr21	43631984	chr21:43631984:M	CACACACACACTCCCACACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:7,1:8:0,7,93	0/1:5,3:8:22,0,52	0/1:5,2:7:10,0,56
+chr21	43632872	chr21:43632872:M	TATGTATGTGTGTGTGTGTGTATGTAT	<7.2>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:25,14:47:99,0,170	0/1:24,15:46:93,0,168	0/1:18,10:37:83,0,116
+chr21	43635929	chr21:43635929:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:9:54,0,44	0/1:3,7:10:88,0,21	0/1:6,5:12:51,0,78
+chr21	43636192	chr21:43636192:M	AAAGAAAAAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA	<14.2>	.	.	Motif=AAAGA	GT:AD:DP:PL	1/1:0,1:1:27,3,0	0/1:6,6:13:123,0,122	0/0:13,0:13:0,39,255
+chr21	43636890	chr21:43636890:M	AAAACAAAAAAAAAAAAAAAAAAAAGAAATAAAGAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:133,15,0	0/1:2,3:5:65,0,36	0/1:1,5:8:120,0,6
+chr21	43637487	chr21:43637487:M	AAATAAATAAATAAATAAATAAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:12,21:33:255,0,135	0/1:11,12:23:151,0,132	0/1:18,12:30:138,0,250
+chr21	43637808	chr21:43637808:M	AAAAAAAAAAAAGAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7:20:71,0,183	0/1:21,17:38:188,0,255	0/1:16,14:32:179,0,198
+chr21	43641916	chr21:43641916:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:12:28,0,100	0/1:3,5:8:61,0,27	0/1:6,4:10:40,0,75
+chr21	43642791	chr21:43642791:M	TTTTCTTTTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:9:140,35,72,98,0,104	0/1:2,3,2:9:76,0,58,54,0,75	1/2:1,7,3:12:215,43,75,166,0,169
+chr21	43652401	chr21:43652401:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:10:85,0,23	0/1:3,4:9:55,0,26	0/1:3,2:6:26,0,34
+chr21	43653182	chr21:43653182:M	AAGGGAAAGGAAGGGAAGGGGAAGGGAAGGGAAGGGGAAGGGAAGGGAAGGGGAAGGGAAGGGGAGGGGAGGGGAGGGAAGGGAAGGGA	<14.6>	.	.	Motif=AAGGG	GT:AD:DP:PL	1/1:0,3:3:76,9,0	1/1:0,3:3:74,9,0	1/1:0,3:6:74,9,0
+chr21	43664328	chr21:43664328:M	AAAAAAAAAAAAAAAAAGAAAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:18:142,0,72	0/1:8,4:13:39,0,97	0/1:11,10:22:122,0,127
+chr21	43666717	chr21:43666717:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:14:84,0,67	0/1:5,6:13:76,0,51	0/1:10,8:19:95,0,120
+chr21	43667042	chr21:43667042:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,19:46:227,0,255	0/1:16,22:38:255,0,175	0/1:16,21:37:255,0,187
+chr21	43675844	chr21:43675844:M	ATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<13>	.	.	Motif=ATTTT	GT:AD:DP:PL	0/1:15,12:27:251,0,255	0/1:7,9:16:199,0,146	0/0:17,0:17:0,51,255
+chr21	43680404	chr21:43680404:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,15:31:196,0,203	0/1:12,16:29:212,0,129	0/1:22,16:38:185,0,255
+chr21	43681262	chr21:43681262:M	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<8.8>,<9.8>	.	.	Motif=AGAT	GT:AD:DP:PL	0/2:19,0,10:29:105,162,255,0,255,255	0/1:14,18,0:32:255,0,255,255,246,255	0/2:20,1,15:36:183,217,255,0,255,255
+chr21	43683973	chr21:43683973:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:10:9,0,97	0/0:7,1:8:0,7,100	0/1:5,4:9:42,0,60
+chr21	43691632	chr21:43691632:M	TTTTTATTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:17:132,0,70	0/1:4,5:9:60,0,43	0/1:3,8:12:117,0,19
+chr21	43695170	chr21:43695170:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:234,0,216	0/1:21,18:40:210,0,255	0/1:20,17:40:215,0,252
+chr21	43696984	chr21:43696984:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,39:39:255,115,0	1/1:0,42:43:255,126,0
+chr21	43704221	chr21:43704221:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:5:3,0,55	1/1:0,3:3:50,9,0	0/0:3,0:4:0,9,51
+chr21	43704960	chr21:43704960:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:28:226,0,255	0/1:20,11:34:230,0,255	0/1:18,6:25:101,0,255
+chr21	43705728	chr21:43705728:M	AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA	<36>,<41>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,3:10:130,60,60,69,0,121	1/2:0,2,2:6:85,58,53,31,0,35	1/2:0,6,7:15:255,178,160,103,0,131
+chr21	43706260	chr21:43706260:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:160,0,179	0/1:10,15:26:195,0,99	0/1:15,10:26:113,0,195
+chr21	43706593	chr21:43706593:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:13:82,0,53	0/1:1,3:5:48,0,2	0/1:6,4:10:39,0,74
+chr21	43706951	chr21:43706951:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:15:29,0,146	0/1:6,6:12:68,0,68	0/1:5,12:18:168,0,37
+chr21	43712199	chr21:43712199:M	AAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:12:125,0,9	1/1:1,5:6:68,1,0	0/1:5,14:20:194,0,28
+chr21	43713250	chr21:43713250:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:14:32,0,119	0/0:9,2:13:0,3,139	0/1:5,6:11:73,0,56
+chr21	43713398	chr21:43713398:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:7:67,0,9	0/1:4,1:7:2,0,53	0/1:3,1:8:0,0,58
+chr21	43724682	chr21:43724682:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:28:0,82,255	0/1:16,12:28:130,0,200	0/0:20,1:22:0,46,255
+chr21	43724841	chr21:43724841:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:16,9:32:183,0,255	0/0:33,0:36:0,102,255
+chr21	43726258	chr21:43726258:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:4:6,0,40	0/1:6,3:10:31,0,70	0/0:7,0:7:0,20,119
+chr21	43730103	chr21:43730103:M	TGATTGATTGATTGATTGATTGATTGATT	<5.2>	.	.	Motif=TGAT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:35,0:35:0,105,255	0/1:18,13:31:255,0,255
+chr21	43733238	chr21:43733238:M	CCCCTCCCCATCCCCACCCC	<2>	.	.	Motif=CCCCAT	GT:AD:DP:PL	0/1:2,6:11:134,0,30	0/1:7,2:14:59,0,149	0/1:2,3:5:61,0,37
+chr21	43736630	chr21:43736630:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0,0:7:0,21,201,21,144,125	0/2:7,0,3:12:16,43,242,0,137,109	0/1:6,3,0:10:60,0,156,51,112,140
+chr21	43738925	chr21:43738925:M	TTTTCTTTTTCTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,29,184	0/0:8,0:9:0,24,140	0/1:7,4:13:36,0,101
+chr21	43750953	chr21:43750953:M	TGTGTGTGCATGTGTGTGTGTGTGTGTG	<13>,<15>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,17,0,11:28:255,255,255,255,255,255,255,0,255,255	1/2:1,11,17,0:29:255,255,255,170,0,255,255,255,255,255	0/3:21,0,0,15:37:255,255,255,255,255,255,0,255,255,255
+chr21	43752102	chr21:43752102:M	TGTGTGTGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,19:31:250,0,124	0/0:39,0:39:0,114,255	0/1:21,13:35:136,0,255
+chr21	43757976	chr21:43757976:M	TTTTCTTTTTCTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,9:31:71,0,255	0/1:12,4:18:17,0,171	0/0:28,3:31:0,38,255
+chr21	43763884	chr21:43763884:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:12:92,0,39	0/1:6,12:20:163,0,44	0/1:7,12:19:152,0,66
+chr21	43766212	chr21:43766212:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:18:84,0,118	0/0:22,2:25:0,39,255	0/1:11,11:26:155,0,119
+chr21	43770107	chr21:43770107:M	AAAAACAAACAAACAAAAAAACAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,81,0	0/1:9,17:26:255,0,169	0/1:13,15:28:255,0,255
+chr21	43772172	chr21:43772172:M	AGAGAGAGAGAGAGA	<9.5>,<10.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:25,15,0:42:245,0,255,197,255,255	0/1:10,14,0:24:255,0,169,174,225,255	0/2:25,1,16:42:255,192,255,0,255,255
+chr21	43776445	chr21:43776445:M	GCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGG	<4.6>	.	.	Motif=GCGGG	GT:AD:DP:PL	0/1:16,9:25:169,0,255	0/1:5,13:19:255,0,81	0/0:14,0:14:0,42,255
+chr21	43776956	chr21:43776956:M	TTTCTTTTCTTTCTTTCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	<8.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,1:1:24,3,0	1/1:0,5:5:127,15,0	.
+chr21	43777289	chr21:43777289:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:15:99,0,74	0/1:4,4:8:45,0,45	0/0:7,0:8:0,23,132
+chr21	43781099	chr21:43781099:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:30:0,67,255	0/0:26,2:28:0,47,255	0/1:22,19:42:222,0,255
+chr21	43782527	chr21:43782527:M	AAACAAACAAACAAACAAACAAACAAACAAA	<8.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:14,16:30:221,0,182	0/1:13,11:24:129,0,166	0/1:19,12:31:133,0,255
+chr21	43785069	chr21:43785069:M	TGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,14:24:255,0,139	0/1:5,7:12:124,0,78	0/0:8,0:10:0,27,198
+chr21	43785978	chr21:43785978:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:164,0,202	0/1:13,19:33:243,0,144	0/1:13,9:22:102,0,175
+chr21	43788806	chr21:43788806:M	TTGTTGTTGTT	<2.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:18,0:18:0,53,255	0/1:21,18:39:225,0,255
+chr21	43805277	chr21:43805277:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:18:146,0,74	0/1:6,11:19:142,0,58	0/0:16,2:18:0,18,248
+chr21	43818195	chr21:43818195:M	TTTTTTGTTTTTGTTTTTGTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:29:166,0,150	0/1:7,13:20:150,0,54	0/1:10,22:33:255,0,78
+chr21	43820846	chr21:43820846:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:144,0,90	0/1:10,11:21:128,0,111	0/1:8,8:18:103,0,93
+chr21	43821502	chr21:43821502:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,8:29:60,0,255	0/1:9,7:20:82,0,116	0/0:13,1:14:0,23,211
+chr21	43821542	chr21:43821542:M	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCACGGTCTCCCTCTC	<7.5>	.	.	Motif=CCTCTC	GT:AD:DP:PL	1/1:0,2:6:70,9,0	0/1:0,1:7:36,0,8	1/1:0,4:5:130,15,0
+chr21	43823565	chr21:43823565:M	AAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,8:14:189,139,255,0,160,134	0/2:5,0,7:13:166,119,243,0,133,107	1/2:1,13,2:20:255,10,23,189,0,171
+chr21	43827368	chr21:43827368:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/0:35,2:38:0,76,255	0/1:19,8:27:69,0,255
+chr21	43827517	chr21:43827517:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:17:236,28,0	0/1:7,9:18:117,0,71	1/1:0,15:16:255,47,0
+chr21	43828954	chr21:43828954:M	CCCCCCCCCACCCCCA	<2.3>,<2.5>	.	.	Motif=CCCCAC	GT:AD:DP:PL	1/2:0,19,18:37:255,255,255,255,0,255	0/2:20,0,17:37:255,255,255,0,255,255	0/1:18,19,0:37:255,0,255,255,255,255
+chr21	43836582	chr21:43836582:M	AAACAAACAAACAAACAAACAAACAAAAAAAC	<7>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,31:31:255,91,0	0/1:15,23:38:255,0,170
+chr21	43838471	chr21:43838471:M	CAAAAAAAAACCAAACCAAACCAAACCAAAACAAAA	<6.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,27:27:255,79,0	0/1:15,13:29:158,0,197
+chr21	43840553	chr21:43840553:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:21:130,0,114	0/1:12,10:25:111,0,155	0/0:32,1:35:0,84,255
+chr21	43841445	chr21:43841445:M	TATTTATTTATTTATTTATTTATTTATATATTT	<7.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,18:34:246,0,208	0/1:14,9:23:95,0,186	0/0:28,0:28:0,83,255
+chr21	43841956	chr21:43841956:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,2:17:0,15,216	0/1:21,4:26:7,0,255	0/1:14,15:31:182,0,146
+chr21	43842687	chr21:43842687:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,7:20:72,0,101	0/1:12,17:30:168,0,84	0/0:32,2:40:0,10,255
+chr21	43843376	chr21:43843376:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:33,0,144	0/0:10,2:13:0,3,148	0/0:29,0:30:0,88,255
+chr21	43843987	chr21:43843987:M	TTTTTTTTTTTTTTTCTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:148,0,92	0/1:12,13:27:168,0,132	1/1:2,32:34:255,64,0
+chr21	43844676	chr21:43844676:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:26,1,18:46:214,255,255,0,255,255	1/2:0,24,12:37:255,208,233,255,0,255	0/0:32,2,0:34:0,64,255,100,255,255
+chr21	43846409	chr21:43846409:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,16:18:253,17,0	1/1:2,12:14:172,7,0	0/1:11,6:19:61,0,149
+chr21	43848256	chr21:43848256:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9>,<12>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:9,0,6:15:130,158,255,0,172,221	1/2:0,12,4:16:255,105,71,216,0,255	0/0:16,0,0:16:0,47,255,48,255,255
+chr21	43855411	chr21:43855411:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:116,0,153	0/1:8,5:17:37,0,127	0/0:32,1:36:0,87,255
+chr21	43856394	chr21:43856394:M	ATATATATATATATATATATATATATATATAT	<11.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:0,3,6:15:120,47,113,0,22,49	1/1:0,3,0:5:108,11,0,82,12,74	0/0:0,0,0:3:0,6,27,6,27,27
+chr21	43857286	chr21:43857286:M	AACAACAACAACAACAACAACAA	<5.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:21,16:38:255,0,255	0/1:17,10:27:190,0,255	0/0:32,0:34:0,102,255
+chr21	43857602	chr21:43857602:M	AAACAAACAAA	<1.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:16,18:34:251,0,210	0/1:31,25:56:255,0,255	0/1:13,23:36:255,0,139
+chr21	43857902	chr21:43857902:M	AAACAAACAAACAAGCAAAAAAAAAAACCAAACAAA	<9.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:14,10:25:141,0,235	0/1:10,7:17:100,0,166	0/0:16,0:16:0,48,255
+chr21	43858537	chr21:43858537:M	TTTGTTTGTTTGTTTTTTG	<5.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,48:48:255,141,0	0/1:24,22:46:255,0,255
+chr21	43861489	chr21:43861489:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:20:119,0,110	0/1:7,11:19:130,0,72	0/1:14,10:24:102,0,172
+chr21	43862723	chr21:43862723:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,62,0	0/1:3,9:15:114,0,14	0/1:11,12:23:136,0,119
+chr21	43864121	chr21:43864121:M	AAAAATAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,16,15:31:255,216,255,231,0,255	1/2:0,18,7:27:255,98,107,255,0,255	0/2:13,0,13:27:116,189,255,0,155,116
+chr21	43866121	chr21:43866121:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:25:170,0,253	0/1:11,7:21:125,0,254	1/1:0,13:15:255,39,0
+chr21	43866200	chr21:43866200:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,11:31:114,0,255	0/1:10,13:25:166,0,114	0/0:46,1:47:0,120,255
+chr21	43888399	chr21:43888399:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,41:41:255,121,0	1/1:0,51:51:255,151,0
+chr21	43889287	chr21:43889287:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,17:41:192,0,255	0/1:19,13:33:128,0,242	0/0:25,2:29:0,49,255
+chr21	43890716	chr21:43890716:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:35:255,83,0	1/1:2,30:35:255,66,0	1/1:1,40:42:255,105,0
+chr21	43894218	chr21:43894218:M	TTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14:30:255,0,255	0/1:14,5:24:65,0,255	0/0:24,0:25:0,65,255
+chr21	43895510	chr21:43895510:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,9:12:214,137,128,54,0,19	1/2:1,5,22:30:255,255,255,66,0,12	2/2:2,2,17:21:255,242,255,25,26,0
+chr21	43898886	chr21:43898886:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,25:56:255,0,255	0/1:23,26:49:255,0,255	1/1:0,48:49:255,145,0
+chr21	43901321	chr21:43901321:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15,1:20:255,56,0,255,40,255	1/1:0,11,1:12:255,33,0,205,18,172	1/2:0,13,5:18:255,74,35,227,0,177
+chr21	43904056	chr21:43904056:M	GTGTGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,5:16:255,77,44,197,0,154	1/2:0,13,12:26:255,173,131,230,0,160	2/2:0,2,16:18:255,255,249,52,17,0
+chr21	43905156	chr21:43905156:M	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,7:7:128,21,0	1/1:0,15:17:255,46,0
+chr21	43909293	chr21:43909293:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:56,0,3	0/1:2,2:4:22,0,22	0/1:1,3:4:40,0,6
+chr21	43917922	chr21:43917922:M	GGGTGTGGGTGT	<1.5>	.	.	Motif=GGGTGT	GT:AD:DP:PL	0/1:8,3:11:48,0,183	0/0:9,0:9:0,27,248	1/1:0,2:2:54,6,0
+chr21	43918589	chr21:43918589:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,26:28:255,46,0	0/1:9,11:21:129,0,104	1/1:0,30:30:255,88,0
+chr21	43920208	chr21:43920208:M	TGTGTGTGTGTGTGTGAGAGATTGTGAGTGAGTGTGTGTGTGT	<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:16,13:29:255,0,255	1/1:0,29:29:255,87,0
+chr21	43924181	chr21:43924181:M	TTTTTTTGTATTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:16:255,47,0	0/1:4,5:13:82,0,35	1/1:0,11:11:200,32,0
+chr21	43926637	chr21:43926637:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2,0:2:58,6,0,40,6,34	0/2:1,0,3:4:77,49,67,0,27,18	1/1:0,6,0:8:197,24,0,141,23,124
+chr21	43931923	chr21:43931923:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,9:22:255,255,236,255,0,241	0/1:9,12,0:22:255,0,214,255,249,255	2/2:0,0,29:29:255,255,255,87,87,0
+chr21	43938086	chr21:43938086:M	TCTCTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,21:39:225,0,125	0/0:38,0:38:0,108,255	1/1:0,34:34:255,97,0
+chr21	43938105	chr21:43938105:M	CACACACACACAGACACACACACACACACACACACACTCACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,10:25:66,0,105	0/1:13,12:30:76,0,110	0/0:18,1:21:0,45,227
+chr21	43938317	chr21:43938317:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:131,15,0	0/0:1,0:2:0,3,29	1/1:0,2:4:70,9,0
+chr21	43947679	chr21:43947679:M	TTTCTTTTCTTTTCTTTTTTTTTTTT	<5.4>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:11,10:21:144,0,166	0/1:14,8:24:100,0,226	0/0:23,1:24:0,51,255
+chr21	43955900	chr21:43955900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:12,10:23:114,0,138	0/0:31,1:35:0,82,255
+chr21	43965781	chr21:43965781:M	TTTTTATTTTTA	<1.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/0:49,0:49:0,147,255	0/1:23,11:34:186,0,255	0/0:40,0:40:0,120,255
+chr21	43972148	chr21:43972148:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,13:33:169,0,247	0/1:22,17:39:191,0,255	0/0:46,0:48:0,141,255
+chr21	43975986	chr21:43975986:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,9:34:192,0,255	0/1:17,16:40:255,0,255	0/0:43,0:45:0,132,255
+chr21	43980276	chr21:43980276:M	AAAAAAAAAAAAAAAACAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:105,18,0	0/0:5,0:6:0,17,94	0/1:8,3:12:17,0,110
+chr21	43984790	chr21:43984790:M	TCTTTTTTTTTTCTTTTTC	<3.3>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/1:11,16:27:255,0,173	0/1:14,16:31:255,0,235	0/0:38,0:39:0,115,255
+chr21	43989772	chr21:43989772:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,5,2:9:150,13,21,81,0,76	1/2:0,2,5:7:124,71,65,34,0,14	1/2:1,1,4:6:65,42,64,0,0,0
+chr21	43995336	chr21:43995336:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,8:16:105,0,79	0/1:3,5:8:61,0,28	0/0:21,0:22:0,64,255
+chr21	43998688	chr21:43998688:M	ATATAAATAAATATATATGTATTATATATATATATATAT	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/0:20,3:27:0,13,95	0/0:12,0:14:0,26,83	0/1:6,3:12:13,0,16
+chr21	44006674	chr21:44006674:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:27:0,60,255	0/0:32,0:36:0,105,255	0/1:17,8:25:70,0,228
+chr21	44009589	chr21:44009589:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,4:39:0,42,255	0/1:20,13:34:131,0,242	0/0:31,1:33:0,79,255
+chr21	44014384	chr21:44014384:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/0:47,1:49:0,126,255	0/1:22,22:44:255,0,255
+chr21	44014573	chr21:44014573:M	TTTTTTGTTTGTTTGTTTTTGTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:32:0,96,255	0/0:30,0:31:0,90,255	0/1:5,7:13:149,0,98
+chr21	44015611	chr21:44015611:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:23:0,49,255	0/0:24,0:29:0,81,255	0/1:20,14:35:158,0,255
+chr21	44018139	chr21:44018139:M	TTTTCTTTTTTTTTTTCTTTTT	<3.5>	.	.	Motif=TTTTCT	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/0:35,2:37:0,67,255	0/1:18,29:48:255,0,250
+chr21	44018692	chr21:44018692:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,20,195	0/0:6,0:6:0,18,101	0/1:9,4:13:31,0,118
+chr21	44022040	chr21:44022040:M	TTTCTTTCTTTTTTTTTTTCTTTC	<7>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:44,0:45:0,132,255	0/0:24,0:24:0,71,255	0/1:16,19:36:255,0,199
+chr21	44022277	chr21:44022277:M	TTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:7:0,20,155	0/0:2,0:4:0,11,85	0/1:4,13:17:255,0,69
+chr21	44025822	chr21:44025822:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,4:10:255,66,37,98,0,70	1/1:0,6,0:8:190,20,0,123,20,106	1/2:0,5,4:10:255,65,36,91,0,64
+chr21	44030247	chr21:44030247:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/0:42,0:42:0,123,255	0/1:23,20:44:233,0,255
+chr21	44034326	chr21:44034326:M	CCCCCAACCCCCCCCCCCACCCCC	<3.7>	.	.	Motif=CCCCCA	GT:AD:DP:PL	0/0:4,0:4:0,12,97	0/0:3,0:3:0,9,76	0/1:3,4:8:88,0,52
+chr21	44040771	chr21:44040771:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:21:0,61,255	0/1:16,4:20:9,0,213	0/1:8,5:14:56,0,99
+chr21	44043210	chr21:44043210:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:4:0,12,114	0/0:2,0:3:0,9,68	0/1:3,4:8:98,0,65
+chr21	44046507	chr21:44046507:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,0:23:0,65,255	0/0:11,0:18:0,35,185	0/1:7,5:16:38,0,89
+chr21	44047533	chr21:44047533:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,14,16,0:31:255,255,255,251,0,255,255,255,255,255	0/2:5,1,22,0:29:255,255,255,0,54,15,255,255,96,255	1/3:0,10,0,7:21:255,192,152,255,193,255,210,0,255,255
+chr21	44049879	chr21:44049879:M	TTTTTTTTTTGTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/0:42,0:44:0,126,255	0/1:15,16:34:255,0,255
+chr21	44056948	chr21:44056948:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,1:52:0,134,255	0/0:46,0:47:0,138,255	0/1:21,27:48:255,0,248
+chr21	44060276	chr21:44060276:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,4:14:35,47,197,0,97,122	0/2:7,2,4:13:32,35,169,0,67,105	0/1:14,11,0:26:131,0,173,201,209,255
+chr21	44060902	chr21:44060902:M	ATACATACATACATACA	<6.2>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:23,0:23:0,69,255	0/1:16,16:32:255,0,255
+chr21	44060916	chr21:44060916:M	ACACACACACACACACACACACACACACACAC	<16.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:12,8,0:20:2,0,19,62,79,255	0/1:13,12,0:27:11,0,15,85,90,255	0/2:11,1,8:25:198,211,237,0,39,255
+chr21	44064304	chr21:44064304:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTG	<15>,<20>,<22>	.	.	Motif=TG	GT:AD:DP:PL	0/2:9,0,10,0:21:143,199,255,0,163,103,198,255,138,255	2/3:1,0,8,7:16:197,243,255,104,189,158,122,222,0,193	0/1:12,14,0,0:27:255,0,255,255,212,255,255,212,255,255
+chr21	44076048	chr21:44076048:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:33:0,98,255	0/0:19,0:23:0,67,255	0/1:17,10:30:188,0,255
+chr21	44078441	chr21:44078441:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:9:9,0,98	0/1:12,4:18:25,0,161	0/1:9,8:18:87,0,112
+chr21	44085709	chr21:44085709:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:38:0,84,255	0/0:35,0:38:0,111,255	0/1:20,22:42:255,0,239
+chr21	44127856	chr21:44127856:M	AAAAAAAAAAAAAAAGAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:2,22:26:255,40,0
+chr21	44137693	chr21:44137693:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:35,0,35	0/1:5,5:11:42,0,42	0/0:4,0:5:0,1,44
+chr21	44193121	chr21:44193121:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:27,5,0	.	0/1:5,6:13:63,0,67
+chr21	44195083	chr21:44195083:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,2:12:0,1,135	1/1:1,7:9:105,10,0	0/0:28,0:30:0,74,255
+chr21	44199396	chr21:44199396:M	AAAAAAAAGAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:27:108,0,255	1/1:0,7:7:177,21,0	0/0:30,0:30:0,90,255
+chr21	44205391	chr21:44205391:M	AAAAAAAAAAAAAACAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:34,0,72	0/1:3,2:5:21,0,39	0/0:12,0:12:0,35,223
+chr21	44205747	chr21:44205747:M	TTTTTTTTTGTTTTTTTGTTTTGTTTTTTGTTTTATTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5:17:41,0,171	1/1:0,3:3:52,9,0	0/0:16,0:17:0,50,255
+chr21	44212356	chr21:44212356:M	TGAGTGAGTGAATGTGGGATGAATGAGTGAGTGA	<1.8>	.	.	Motif=TGAG	GT:AD:DP:PL	0/1:31,4:36:27,0,255	0/1:20,7:28:140,0,255	0/1:24,4:29:65,0,255
+chr21	44215767	chr21:44215767:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:6:0,18,109	1/1:0,3:4:41,1,0	0/0:4,0:6:0,17,94
+chr21	44220790	chr21:44220790:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,6:14:71,0,109	0/1:17,10:27:98,0,223	0/0:29,0:29:0,85,255
+chr21	44222935	chr21:44222935:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,15:22:217,0,66	0/1:10,12:22:148,0,112	0/0:24,0:24:0,71,255
+chr21	44232350	chr21:44232350:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:3:25,0,8	1/1:0,4:4:65,12,0	.
+chr21	44238860	chr21:44238860:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/1:5,6:11:70,0,52	0/1:2,2:6:20,0,31
+chr21	44243129	chr21:44243129:M	CCCCCCCCCCGCCCCCCC	<14>,<17>	.	.	Motif=C	GT:AD:DP:PL	0/2:5,0,7:14:75,111,255,0,82,47	1/2:0,6,9:15:255,136,219,161,0,135	0/0:7,0,0:9:0,23,215,22,134,114
+chr21	44254828	chr21:44254828:M	TTGTTGTTGTTGTT	<3.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:20,14:34:255,0,255	0/0:40,0:40:0,120,255
+chr21	44255506	chr21:44255506:M	AAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21,0:35:255,0,255,255,255,255	1/2:0,14,7:24:255,188,146,255,0,255	0/0:44,0,0:44:0,132,255,132,255,255
+chr21	44256420	chr21:44256420:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:35,0,35	0/0:3,0:3:0,9,51	0/0:1,0:1:0,3,17
+chr21	44257681	chr21:44257681:M	AAAAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,5:6:152,81,64,16,5,0	0/1:2,6,5:15:222,0,46,15,1,55	0/0:9,0,0:12:0,36,255,36,255,255
+chr21	44257694	chr21:44257694:M	AAATAAATAAATAAATAAATAAATAAATAAA	<6.5>,<6.8>,<33.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,4,0,3:7:113,33,21,59,30,48,89,0,27,105	1/2:0,6,6,0:12:204,47,14,49,0,14,236,50,50,255	0/0:15,0,0,1:18:0,43,255,36,255,243,39,255,255,255
+chr21	44264447	chr21:44264447:M	TTTTTCTTTTTCTTTTTCTTTTTTTTTT	<34>,<35>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,0,10:23:218,184,255,0,255,255	1/2:0,18,10:28:255,176,96,255,0,238	0/0:19,0,0:19:0,57,255,57,255,255
+chr21	44265035	chr21:44265035:M	TTTTTCTTTTCTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:120,0,65	1/1:0,10:10:172,29,0	0/0:5,0:5:0,15,89
+chr21	44266470	chr21:44266470:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,18:28:248,0,100	1/1:0,32:32:255,94,0	0/0:26,3:29:0,32,255
+chr21	44268689	chr21:44268689:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,15:18:255,34,0	0/1:2,11:14:150,0,4	0/1:12,8:20:84,0,155
+chr21	44269854	chr21:44269854:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:30:169,0,205	0/1:13,13:27:147,0,156	0/0:37,1:40:0,96,255
+chr21	44270162	chr21:44270162:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:9:65,0,47	0/1:1,6:8:81,0,6	0/0:18,0:19:0,56,255
+chr21	44271133	chr21:44271133:M	CTTTTCTTTCTTTTCTTTTCTTCTCTTTTTTTTTTTT	<7.2>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:14,12:27:133,0,157	1/1:1,22:25:255,55,0	0/0:20,0:22:0,61,255
+chr21	44276240	chr21:44276240:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,19:41:234,0,255	1/1:3,31:38:255,57,0	0/0:31,2:33:0,61,255
+chr21	44277413	chr21:44277413:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,2:9:10,0,91	0/1:7,3:11:19,0,98	0/1:1,2:5:23,0,18
+chr21	44278068	chr21:44278068:M	TTTTCTTTTCTTTTCTTTTCTTTCTTTTTTTT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:14,18:32:255,0,255	0/0:29,0:30:0,87,255	0/1:9,22:32:255,0,148
+chr21	44278712	chr21:44278712:M	TTATTTTATTTTATTTATTTTATTTTATTTTATATTTTATTTTATTTTATTTTATTTTATTTTATT	<12.2>,<14.2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:2,5,0:7:77,0,18,95,33,161	0/2:3,0,3:7:37,54,124,0,46,37	0/1:8,4,0:13:40,0,116,74,128,230
+chr21	44280278	chr21:44280278:M	AAAAGAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:169,0,225	0/0:40,0:42:0,122,255	0/1:21,18:40:209,0,255
+chr21	44303434	chr21:44303434:M	AAAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:108,12,0	1/1:0,4:4:115,12,0	.
+chr21	44308560	chr21:44308560:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:145,11,0	0/1:7,6:15:62,0,92	0/0:9,2:14:0,4,151
+chr21	44311151	chr21:44311151:M	CACACACAGACACACACACAGAGACAGACACGTGCACAAACACACACATGCAGACACACAGACATGCACACAGACGCACACACACACA	<11>,<28>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,1,3:6:81,63,106,0,23,37	0/1:2,3,1:6:64,0,37,40,16,83	0/2:2,0,2:4:53,59,104,0,46,40
+chr21	44337084	chr21:44337084:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:26:0,76,255	0/1:13,8:24:137,0,255	0/0:29,0:33:0,98,255
+chr21	44343669	chr21:44343669:M	AAAAAAAGAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:13,23:37:255,0,255	0/0:47,0:48:0,144,255
+chr21	44344383	chr21:44344383:M	AAAAAAAAAAAAAAAAAAAA	<14>,<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/3:1,12,0,5:20:255,71,105,255,141,255,255,0,255,255	2/3:0,0,10,2:13:255,255,255,44,65,34,255,255,0,255	1/3:1,10,0,7:18:255,104,170,255,200,255,252,0,255,246
+chr21	44356532	chr21:44356532:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,8:12:192,0,31	0/1:11,2:15:15,0,254	0/1:4,8:14:182,0,69
+chr21	44360569	chr21:44360569:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:145,0,181	1/1:0,18:19:255,55,0	0/1:13,12:26:140,0,167
+chr21	44362349	chr21:44362349:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/1:7,9:19:116,0,74	0/1:2,4:7:59,0,15
+chr21	44381936	chr21:44381936:M	GATATGATAGATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATGATAGATAGATAG	<15.2>,<17.2>	.	.	Motif=GATA	GT:AD:DP:PL	1/2:0,12,8:20:255,213,177,255,0,255	2/2:0,0,14:14:255,255,255,42,42,0	1/2:0,12,4:16:255,107,71,255,0,255
+chr21	44389874	chr21:44389874:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:25:137,0,158	0/0:23,2:25:0,38,255	0/1:19,19:40:245,0,227
+chr21	44394318	chr21:44394318:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/0:7,0:8:0,12,107	0/1:1,3:4:40,0,6
+chr21	44398207	chr21:44398207:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:31:198,0,181	1/1:0,20:21:255,51,0	0/1:18,12:31:129,0,247
+chr21	44403956	chr21:44403956:M	ACATACATACACACATGCACATACACATGCATACACACATACA	<9.8>	.	.	Motif=ACAT	GT:AD:DP:PL	0/1:16,11:27:86,0,158	1/1:0,18:20:255,51,0	0/1:13,9:22:69,0,126
+chr21	44404283	chr21:44404283:M	CATACACATATACATGCACACATACATGCACATACACATATACACACATGCATACACATACAAATACATGCAGACACATACA	<1.8>	.	.	Motif=CATACA	GT:AD:DP:PL	0/1:7,2:9:69,0,140	0/0:8,0:8:0,24,188	0/1:7,4:11:159,0,134
+chr21	44404370	chr21:44404370:M	CACACATACATACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:16,8:25:88,0,237	1/1:0,14:14:255,41,0	0/1:22,6:28:33,0,255
+chr21	44407132	chr21:44407132:M	TTCCTCCCTTCCTCCCTTCCTTCCTTCC	<33.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,3:3:36,8,0	1/1:0,2:2:24,5,0	1/1:0,1:1:12,3,0
+chr21	44407451	chr21:44407451:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:60,0,66	1/1:0,6:7:184,21,0	0/1:5,4:10:95,0,113
+chr21	44408655	chr21:44408655:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:13:40,0,92	1/1:0,9:10:148,27,0	0/1:3,7:10:89,0,22
+chr21	44430906	chr21:44430906:M	AATATAAATATA	<2.7>	.	.	Motif=AATATA	GT:AD:DP:PL	0/1:25,20:45:255,0,255	1/1:0,29:29:255,87,0	0/1:19,18:37:255,0,255
+chr21	44430965	chr21:44430965:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,22:47:255,0,255	1/1:1,32:35:255,74,0	0/1:23,16:40:177,0,255
+chr21	44445440	chr21:44445440:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,17:38:210,0,226	0/1:20,18:39:198,0,243	0/1:20,11:31:105,0,255
+chr21	44446004	chr21:44446004:M	AAAAAAAAAACAAAACAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,25:40:255,0,166	0/1:12,19:32:246,0,129	0/1:26,19:45:218,0,255
+chr21	44446922	chr21:44446922:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:110,0,93	0/1:6,5:13:61,0,67	0/1:6,9:18:117,0,65
+chr21	44448242	chr21:44448242:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:5,0,11	0/1:2,3:6:42,0,15	1/1:0,2:2:33,6,0
+chr21	44453121	chr21:44453121:M	CAAAAACAAAAACAAAAACAAAAACAAACAAACAAAAA	<7>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:15,18:39:255,0,242	0/1:10,11:29:182,0,166	0/1:13,10:31:155,0,228
+chr21	44468366	chr21:44468366:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,11:21:246,0,217	0/1:5,10:15:233,0,96	0/1:8,6:14:126,0,183
+chr21	44535897	chr21:44535897:M	AAAAAAAAAAAAAGGAAAAAAGAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,65,255	1/2:1,13,11:25:255,143,127,206,0,154	0/1:5,5,1:12:123,0,105,82,72,140
+chr21	44538423	chr21:44538423:M	CCCCCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	.	1/1:0,10,1:12:255,33,0,195,18,165	1/2:0,1,4:5:83,58,55,17,0,3
+chr21	44542743	chr21:44542743:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAGAAAAAAGAAAAAGAAAAAAA	<49>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:74,0,82	1/1:2,10:13:143,5,0	1/1:1,5:7:77,3,0
+chr21	44551494	chr21:44551494:M	GTGAGTGAGTGAGTGTGTGTGTGAGTGTGTGAGTGAGTGTGTGTGTGAG	<15.2>	.	.	Motif=GTGA	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,9:9:234,27,0	1/1:0,19:19:255,57,0
+chr21	44572835	chr21:44572835:M	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,12:15:255,221,196,26,27,0	1/2:0,10,8:18:255,132,80,164,0,112	2/2:0,0,9:9:255,177,152,27,26,0
+chr21	44582989	chr21:44582989:M	TTTTTCTTTCTTTCTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,37:37:255,109,0	1/1:0,33:33:255,98,0
+chr21	44583184	chr21:44583184:M	CTGAGTGAGCTGAGCTG	<3.6>	.	.	Motif=CTGAG	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,23:23:255,69,0	1/1:0,37:37:255,111,0
+chr21	44588754	chr21:44588754:M	TATGTATGTGTGTATATATATGTATGTGTGTGTGTAT	<9.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:19,4:28:0,22,126	1/1:3,8:15:52,5,0	0/1:14,6:23:2,0,69
+chr21	44588788	chr21:44588788:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:33,0:33:0,95,255	0/1:9,6:16:56,0,89	0/0:24,0:24:0,69,255
+chr21	44594823	chr21:44594823:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:22:27,0,229	0/1:4,4:10:40,0,62	1/1:1,7:10:128,11,0
+chr21	44599135	chr21:44599135:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<21>,<24>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,6,0,0:6:168,18,0,172,18,176,172,18,176,177	3/3:0,0,0,4:5:61,61,61,61,61,61,12,12,12,0	1/2:0,10,4,0:16:255,115,85,255,0,255,255,115,255,255
+chr21	44600560	chr21:44600560:M	ACTCACTCACTCATTCACTCACTCACCCACTCACTC	<8>	.	.	Motif=ACTC	GT:AD:DP:PL	0/1:12,12:24:159,0,160	0/0:23,0:23:0,68,255	0/1:13,17:30:230,0,155
+chr21	44606164	chr21:44606164:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6,0:12:70,0,70,104,88,244	0/1:10,4,1:16:32,0,131,59,122,227	0/2:3,0,7:11:100,127,225,0,43,19
+chr21	44615550	chr21:44615550:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:23:107,0,159	1/1:0,20:24:255,48,0	0/0:22,4:27:0,11,255
+chr21	44635346	chr21:44635346:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	1/1:0,0:1:0,0,0	0/1:5,2:7:14,0,64
+chr21	44645359	chr21:44645359:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,13:24:177,0,113	1/1:1,19:22:255,37,0	0/1:10,9:20:113,0,119
+chr21	44650215	chr21:44650215:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,21:30:255,0,79	1/1:1,30:31:255,74,0	0/1:9,15:24:202,0,94
+chr21	44651980	chr21:44651980:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:3:0,9,53	0/0:3,0:3:0,9,51	0/1:1,3:7:46,0,12
+chr21	44661282	chr21:44661282:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:64,0,70	1/1:0,4:5:79,14,0	0/0:3,0:5:0,14,75
+chr21	44672570	chr21:44672570:M	AAAACAAAAAAAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:31:193,0,211	1/1:0,34:34:255,100,0	0/1:16,22:38:255,0,184
+chr21	44674119	chr21:44674119:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:32:166,0,241	1/1:1,30:34:255,81,0	0/0:28,1:31:0,73,255
+chr21	44674732	chr21:44674732:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<23>,<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	2/4:0,0,5,1,2:8:176,178,199,42,66,51,147,149,17,140,140,136,0,119,131	3/4:1,0,0,7,4:12:217,239,255,232,255,255,38,77,77,43,97,115,114,0,80	1/2:0,7,10,0,0:17:255,255,243,193,0,156,255,255,193,255,255,255,193,255,255
+chr21	44674876	chr21:44674876:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,3:35:0,47,255	0/0:34,3:38:0,58,255	0/1:17,25:42:255,0,188
+chr21	44675528	chr21:44675528:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:138,0,255	1/1:0,46:46:255,135,0	0/1:18,26:44:255,0,205
+chr21	44689713	chr21:44689713:M	ATATATATATATATATATATATATATAT	<15>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:5:41,41,41,8,8,0	.	1/1:0,3,0:3:48,9,0,57,9,88
+chr21	44693648	chr21:44693648:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,138,0	1/1:0,44:44:255,132,0	1/1:0,46:47:255,138,0
+chr21	44708008	chr21:44708008:M	CACACACACACACACACACACACACACACACACACACACCACACA	<17.5>,<19.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,14,0:16:255,45,0,255,42,255	1/1:0,16,0:17:255,51,0,255,51,255	1/2:0,9,11:22:255,255,249,243,0,204
+chr21	44710075	chr21:44710075:M	CCCCCACCCCCAC	<2.3>	.	.	Motif=CCCCCA	GT:AD:DP:PL	.	1/1:0,25:25:255,75,0	0/0:23,0:23:0,69,255
+chr21	44716736	chr21:44716736:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:2,0,5:7:127,133,186,0,53,38	0/2:2,0,4:7:100,108,170,0,62,50	0/1:3,10,0:15:255,0,47,255,80,255
+chr21	44721227	chr21:44721227:M	ACACACACACACACACACACACACACACACACACACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,21:23:255,255,255,64,58,0	0/2:13,0,6:20:52,107,255,0,179,158	1/2:0,13,16:31:255,255,255,216,0,255
+chr21	44721299	chr21:44721299:M	ATAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAG	<10.8>,<12.8>,<13.8>	.	.	Motif=ATAG	GT:AD:DP:PL	2/2:0,0,19,0:19:255,255,255,56,57,0,255,255,56,255	2/3:0,0,12,11:23:255,255,255,199,200,134,185,217,0,151	1/2:1,11,11,0:23:255,189,255,189,0,255,255,208,255,255
+chr21	44721908	chr21:44721908:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,3:11:21,0,104	0/1:8,2:11:2,0,115	0/0:7,1:10:0,11,127
+chr21	44745301	chr21:44745301:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,30:32:255,57,0	0/1:29,19:49:193,0,255	0/1:22,19:41:226,0,255
+chr21	44752615	chr21:44752615:M	AGAGAGAAAGAGAGGGAGAGAGGGAGA	<12.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	0/1:13,12:25:143,0,161	0/1:13,10:23:119,0,175
+chr21	44757725	chr21:44757725:M	GGGGGGTGGGGGGGGGG	<18>	.	.	Motif=G	GT:AD:DP:PL	1/1:1,10:11:158,14,0	1/1:0,8:8:136,23,0	0/1:2,7:9:95,0,8
+chr21	44787093	chr21:44787093:M	AAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,10:23:73,124,255,0,90,60	0/2:14,1,10:27:60,117,255,0,123,109	1/2:0,20,10:39:255,123,144,239,0,255
+chr21	44794530	chr21:44794530:M	TTTTTTTGTTTTTTTTTTTTTTT	<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,6:14:174,100,144,92,0,134	0/1:3,8,2:14:111,0,35,113,10,221	1/1:0,20,0:21:255,62,0,255,63,255
+chr21	44800916	chr21:44800916:M	CAGAGACAGAGA	<1.7>	.	.	Motif=CAGAGA	GT:AD:DP:PL	0/1:22,19:41:255,0,255	0/1:26,26:52:255,0,255	1/1:0,42:42:255,126,0
+chr21	44826357	chr21:44826357:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,15:29:194,0,166	0/1:15,15:30:176,0,176	0/0:33,1:34:0,82,255
+chr21	44826837	chr21:44826837:M	AAAAAAAAAAAAAAAAAAGAAAAA	<17>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,6:30:255,107,89,255,0,255	1/2:1,13,7:24:255,102,151,255,0,255	1/1:0,36,0:40:255,119,0,255,119,255
+chr21	44828164	chr21:44828164:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:18:52,0,255	0/1:6,4:12:73,0,151	0/0:17,0:20:0,59,255
+chr21	44828783	chr21:44828783:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,13:20:200,0,34	0/1:6,5:12:61,0,69	0/0:17,0:17:0,50,255
+chr21	44830608	chr21:44830608:M	GGGGTGGGGGTGGGGGTGGGGGTGGGGG	<5.7>	.	.	Motif=GGGGTG	GT:AD:DP:PL	0/1:10,6:16:67,0,144	0/1:5,4:9:46,0,64	0/0:15,0:15:0,44,255
+chr21	44839696	chr21:44839696:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:59,0,59	0/1:6,7:14:89,0,61	1/1:0,12:15:239,43,0
+chr21	44842396	chr21:44842396:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,8:11:207,0,3	1/1:0,7:10:226,27,0	0/1:1,3:7:84,0,15
+chr21	44844250	chr21:44844250:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,30:31:255,73,0	1/1:2,31:33:255,61,0	1/1:0,40:40:255,118,0
+chr21	44848127	chr21:44848127:M	ACCTCCACCTCC	<1.8>	.	.	Motif=ACCTCC	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:21,19:40:255,0,255	1/1:0,41:41:255,123,0
+chr21	44852184	chr21:44852184:M	TTTTTTATTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:28:186,0,184	0/0:36,0:36:0,106,255	0/1:22,14:36:155,0,255
+chr21	44853508	chr21:44853508:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:9:106,57,62,43,0,86	1/2:1,4,3:8:110,58,62,50,0,100	1/1:1,11,0:13:186,20,0,219,38,255
+chr21	44866210	chr21:44866210:M	ACACACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,19:19:255,55,0	1/1:0,23:28:255,75,0	1/1:0,15:15:247,44,0
+chr21	44866424	chr21:44866424:M	ACACACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:80,12,0	1/1:0,1:2:19,3,0	1/1:0,2:2:39,6,0
+chr21	44870526	chr21:44870526:M	AAAAAAAAAAAAAAAAAAAAAAA	<14>,<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17,1:20:255,45,0,255,21,255	1/1:0,12,0:14:255,42,0,255,42,255	2/2:0,0,4:4:108,110,113,12,12,0
+chr21	44877125	chr21:44877125:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:13:65,0,75	0/1:9,4:14:29,0,126	0/1:4,19:23:255,0,4
+chr21	44880719	chr21:44880719:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:35:255,0,255	0/1:22,12:37:222,0,255	1/1:0,15:15:255,45,0
+chr21	44882992	chr21:44882992:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,19:42:255,0,255	0/1:12,24:38:255,0,222	1/1:0,20:21:255,60,0
+chr21	44883773	chr21:44883773:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:10:56,0,115	0/1:5,2:9:33,0,113	1/1:0,7:9:197,24,0
+chr21	44892605	chr21:44892605:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:9,0,26	0/1:1,1:3:11,0,10	1/1:0,5:5:85,15,0
+chr21	44892734	chr21:44892734:M	AAAAAAAAAAACAAAAAACAAAAAACAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,91,255	0/1:5,13:18:174,0,34	0/0:35,0:36:0,105,255
+chr21	44904606	chr21:44904606:M	ACACAAACACACCACATGCACGCACACACACTCGCACACACATACACACACCAAACACACACACATGCACTCACGCACATACACCACACACA	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:1,1:2:50,0,21	1/1:0,3:4:167,9,0	1/1:0,0:1:0,0,0
+chr21	44906128	chr21:44906128:M	CTTCCCTCCCTTCCCCTTCCCTCCCTTCCCTCCCTTCCCTCCCTCCCTTCCCTCCCCTTCTCTTCCCTTCC	<11.6>	.	.	Motif=CTTCC	GT:AD:DP:PL	0/1:4,8:12:184,0,72	1/1:0,21:21:255,63,0	0/0:3,0:4:0,10,83
+chr21	44914933	chr21:44914933:M	AAAAAAAAAAGAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,93,255	0/0:34,1:36:0,86,255	0/1:21,15:39:137,0,245
+chr21	44922659	chr21:44922659:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,78,0	1/1:0,32:35:255,101,0	1/1:0,22:26:255,76,0
+chr21	44925138	chr21:44925138:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,2:34:0,59,255	0/1:19,13:33:132,0,244	0/0:38,3:42:0,69,255
+chr21	44925397	chr21:44925397:M	AAGGAAGAAGGAAGGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<19.5>,<20.5>	.	.	Motif=AAGG	GT:AD:DP:PL	1/2:0,2,2:5:65,17,8,30,0,18	1/2:0,1,3:7:63,25,14,28,0,15	1/1:0,9,1:14:212,33,0,133,21,104
+chr21	44935942	chr21:44935942:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,97,0	0/1:7,12:19:160,0,68	1/1:1,25:27:255,61,0
+chr21	44938103	chr21:44938103:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,0:47:0,138,255	0/1:20,19:41:220,0,255	0/0:38,2:40:0,81,255
+chr21	44940673	chr21:44940673:M	TTTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,18:33:255,255,245,252,0,162	2/2:0,2,41:44:255,255,255,128,94,0	1/2:0,21,31:52:255,255,255,255,0,226
+chr21	44950101	chr21:44950101:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:21:88,0,171	0/0:16,1:19:0,38,255	0/1:16,18:34:228,0,192
+chr21	44955208	chr21:44955208:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,23:26:255,40,0	1/1:2,15:18:230,18,0	1/1:1,17:18:255,35,0
+chr21	44963376	chr21:44963376:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,9,11:23:255,195,255,147,0,197	2/2:2,0,15:19:248,255,255,21,50,0	1/2:4,11,14:30:255,192,255,132,0,236
+chr21	44968754	chr21:44968754:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:51,0,97	0/0:16,0:17:0,49,255	0/1:6,5:12:53,0,79
+chr21	44988460	chr21:44988460:M	TGTGTGTGCGTGTGTG	<9>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,9:24:96,0,209	0/0:29,0:29:0,85,255	0/1:17,16:33:196,0,213
+chr21	44988491	chr21:44988491:M	GTGTGCGTGTGCATGCGTGTGCGTGCGTGTGTGTGCGTGTGCGTGTGC	<8.3>	.	.	Motif=GTGTGC	GT:AD:DP:PL	0/0:14,4:18:0,12,71	0/0:23,0:23:0,52,165	0/1:5,7:12:23,0,9
+chr21	44992540	chr21:44992540:M	GTGTGTGTGTGTGTGTGAGAGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,11:24:235,0,255	0/0:28,0:28:0,84,255	0/1:11,20:32:255,0,216
+chr21	44994479	chr21:44994479:M	TGTGTGAGTGTGCGTGTGTGTGTGTTGTGTGTGTGTGTGTG	<21.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,6:15:255,160,133,169,0,220	1/1:0,18,0:19:255,56,0,255,57,255	1/2:0,13,7:20:255,185,147,237,0,255
+chr21	45013931	chr21:45013931:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,55,0	1/1:0,15:18:255,52,0	1/1:0,19:21:255,61,0
+chr21	45029237	chr21:45029237:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:17:158,0,41	0/1:10,14:28:180,0,110	0/1:13,9:22:95,0,165
+chr21	45052603	chr21:45052603:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7:20:72,0,183	0/0:33,0:33:0,97,255	0/1:18,15:34:175,0,231
+chr21	45057536	chr21:45057536:M	TTTTTTCTTTTCTTTCTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,9:30:88,0,255	0/0:27,0:27:0,79,255	0/1:15,3:18:2,0,219
+chr21	45059786	chr21:45059786:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,2:19:0,19,255	0/1:15,9:26:94,0,190	0/0:28,1:30:0,70,255
+chr21	45061429	chr21:45061429:M	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT	<10.8>,<11.8>	.	.	Motif=TCTG	GT:AD:DP:PL	0/2:16,1,11:28:237,184,255,0,255,255	0/1:15,9,0:24:88,0,193,133,255,255	0/2:19,0,14:33:255,247,255,0,255,255
+chr21	45065528	chr21:45065528:M	CCCCCCCCCCC	<14>	.	.	Motif=C	GT:AD:DP:PL	0/0:15,0:16:0,48,255	0/0:16,0:17:0,51,255	0/1:5,6:11:129,0,114
+chr21	45092899	chr21:45092899:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,43:44:255,111,0	0/1:29,26:55:255,0,255
+chr21	45105080	chr21:45105080:M	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<6.4>	.	.	Motif=TTGTT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,28:28:255,82,0	1/1:0,29:29:255,86,0
+chr21	45106194	chr21:45106194:M	TTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,11:34:255,200,105,255,0,255	1/1:0,26,0:29:255,78,0,255,84,255	0/2:22,1,15:41:255,255,255,0,255,255
+chr21	45113524	chr21:45113524:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:29,8:38:4,0,237	0/0:38,0:38:0,103,255	0/1:12,11:23:66,0,77
+chr21	45123275	chr21:45123275:M	GTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:0,41:41:255,120,0	0/1:18,23:41:255,0,203
+chr21	45124767	chr21:45124767:M	GTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<24>,<25>,<27>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,9,7:16:255,255,255,183,194,164,119,159,0,213	2/2:0,3,16,0:19:247,195,223,53,4,0,255,255,57,255	1/3:0,12,0,6:18:255,159,133,255,164,255,255,0,209,255
+chr21	45134690	chr21:45134690:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,15:19:225,2,0	0/1:5,22:28:255,0,4	0/1:13,7:24:54,0,199
+chr21	45138923	chr21:45138923:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:26:86,0,201	0/0:17,2:21:0,25,255	0/1:9,12:22:143,0,100
+chr21	45166880	chr21:45166880:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,52:53:255,138,0	0/1:18,38:56:255,0,172
+chr21	45174683	chr21:45174683:M	ATACATACATACATACATACATACATACATACATACATACATACAT	<10.5>	.	.	Motif=ATAC	GT:AD:DP:PL	0/1:16,16:33:210,0,221	1/1:0,37:38:255,111,0	0/0:27,0:28:0,82,255
+chr21	45184449	chr21:45184449:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13:17:242,29,0	1/1:2,21:29:255,49,0	0/1:12,12:25:142,0,152
+chr21	45188614	chr21:45188614:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,21:35:255,0,235	1/1:0,25:27:255,75,0	0/0:52,0:54:0,161,255
+chr21	45189734	chr21:45189734:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/1:17,11:30:104,0,228	0/0:36,1:39:0,96,255
+chr21	45191850	chr21:45191850:M	ATATATATATATATATATATATATATATATAT	<9.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,3:9:101,12,64,94,0,88	2/2:0,0,3:5:15,28,97,6,14,0	1/2:0,2,0:3:50,3,9,48,0,47
+chr21	45191881	chr21:45191881:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:18:255,36,0	1/1:0,0:1:0,0,0	1/1:0,18:19:255,56,0
+chr21	45197500	chr21:45197500:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:16,5:22:21,0,219	0/1:11,9:20:99,0,135
+chr21	45205263	chr21:45205263:M	AAAGAAAGAAAGAAAGAAAGAAAGAAATGAAA	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:31,0:32:0,83,255	0/0:22,0:22:0,64,255	0/1:10,15:30:204,0,86
+chr21	45219990	chr21:45219990:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,7:15:83,107,255,0,143,101	1/2:1,3,12:16:227,155,170,34,0,5	0/1:11,7,1:21:168,0,250,125,175,255
+chr21	45225071	chr21:45225071:M	TTGTTTTGTTTTGTTTTGTTTTGTT	<4>	.	.	Motif=TTGTT	GT:AD:DP:PL	0/1:34,24:58:255,0,255	1/1:0,52:53:255,154,0	0/0:45,0:45:0,133,255
+chr21	45243231	chr21:45243231:M	AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAACAAAAGAAAAAAAGAAAAA	<59>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,0:5:5,0,70	0/1:1,3:4:74,0,16	0/0:6,0:6:0,18,166
+chr21	45249978	chr21:45249978:M	AAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,28:42:255,0,224	0/1:16,16:34:255,0,255	0/0:22,0:29:0,85,255
+chr21	45275885	chr21:45275885:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,14:39:146,0,255	0/1:16,9:26:93,0,207	0/0:32,0:32:0,94,255
+chr21	45287191	chr21:45287191:M	GCCCCGGCCCCTGCCCCTGCCCCTGCCCCTG	<6.2>	.	.	Motif=GCCCCT	GT:AD:DP:PL	0/1:4,4:8:51,0,51	0/0:7,1:8:0,6,105	0/0:5,0:5:0,15,91
+chr21	45290565	chr21:45290565:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:29:205,0,141	0/1:19,16:38:185,0,226	0/0:41,0:41:0,120,255
+chr21	45308087	chr21:45308087:M	ACACACATACACAGACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,11:37:255,0,255	1/1:0,25:25:255,75,0	0/1:20,15:35:255,0,255
+chr21	45311773	chr21:45311773:M	ACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:22,1:26:0,48,255	0/1:8,22:32:255,0,51
+chr21	45311875	chr21:45311875:M	CCATCCATCCATCCATCCATCCATCCATCCATTCATCCATCCATCCATCCATCCA	<14.8>	.	.	Motif=CCAT	GT:AD:DP:PL	0/1:9,11:20:147,0,109	1/1:0,14:14:248,41,0	0/1:3,9:13:127,0,25
+chr21	45346258	chr21:45346258:M	TTTTTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:23:0,66,255	0/1:12,28:42:255,0,234	0/0:13,0:17:0,47,255
+chr21	45350807	chr21:45350807:M	CACACACACACACACACACAC	<8.5>,<9.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,42,0:42:255,126,0,255,124,255	1/2:0,22,22:45:255,255,255,255,0,255	1/1:0,48,0:48:255,144,0,255,142,255
+chr21	45398792	chr21:45398792:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:41:0,122,255	0/0:33,0:36:0,105,255	0/1:17,8:28:140,0,255
+chr21	45401127	chr21:45401127:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,6:7:92,111,170,2,18,0	0/2:7,0,6:13:66,102,247,0,102,84	0/1:6,10,4:21:131,0,88,115,21,255
+chr21	45401382	chr21:45401382:M	TTTGTTTGTTT	<1.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:39,0:39:0,115,255	0/1:29,24:53:255,0,255
+chr21	45412238	chr21:45412238:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:21:255,62,0	1/1:0,11:15:255,37,0	1/1:0,22:27:255,75,0
+chr21	45428891	chr21:45428891:M	TTTCTTTCTTTTCTTTTTTTTTTTT	<4.8>,<5.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:16,9,0:25:87,0,214,156,241,255	0/1:18,18,0:36:216,0,217,255,255,255	0/2:15,2,8:26:74,106,255,0,190,213
+chr21	45432237	chr21:45432237:M	GCTGGGGCTGGGGCTGGGCTGG	<2.7>	.	.	Motif=GCTGGG	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/0:27,0:27:0,80,255	0/1:15,16:31:210,0,191
+chr21	45437211	chr21:45437211:M	CACACACACACACAGACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/0:6,2:8:0,1,40	0/0:12,0:12:0,31,117	1/1:0,3:4:28,7,0
+chr21	45437246	chr21:45437246:M	ACACACACACACTCACACACTCAGACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,3:9:31,0,89	0/0:17,1:18:0,35,255	1/1:0,4:6:91,17,0
+chr21	45437359	chr21:45437359:M	CACACACACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,1:1:19,3,0	1/1:0,7:7:126,21,0	1/1:0,2:2:37,6,0
+chr21	45437435	chr21:45437435:M	CACACACACACTCACTCACAGACAGACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:29,10:40:126,0,255	0/1:25,5:31:37,0,255	0/1:13,8:23:140,0,255
+chr21	45437625	chr21:45437625:M	CACACACACTCACACA	<6>,<10>,<11>,<12>,<16>	.	.	Motif=CA	GT:AD:DP:PL	3/5:0,1,1,3,2,4:11:159,159,182,96,84,94,70,57,76,77,78,68,76,75,90,74,87,18,0,16,118	1/3:0,3,1,2,2,0:8:103,81,96,58,19,81,38,0,69,74,43,6,68,73,85,120,104,100,91,100,198	2/4:0,0,4,1,4,0:9:150,167,219,56,57,30,47,51,17,24,45,57,0,17,30,164,219,57,51,57,220
+chr21	45437689	chr21:45437689:M	CACACACACACACACACTCAGACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	0/1:2,3:8:66,0,17	0/1:1,3:5:50,0,5	1/1:0,7:12:181,31,0
+chr21	45437925	chr21:45437925:M	CACACACACACACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:10,0:12:0,15,77	0/0:10,0:12:0,30,107	1/1:0,4:4:36,10,0
+chr21	45437965	chr21:45437965:M	CACACACACACTCACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:14,0:18:0,2,165	0/0:10,0:14:0,18,137	1/1:1,5:6:61,2,0
+chr21	45438007	chr21:45438007:M	CACACACACACTCACTCACACACAGACACACA	<14>,<17>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,2,3:5:32,19,47,22,0,25	1/2:0,3,2:6:36,10,24,35,0,50	0/0:3,0,1:5:0,1,40,3,12,17
+chr21	45438249	chr21:45438249:M	CACACACACACACTCACACTCAGACACACA	<14>,<16>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,2,0:9:1,0,26,21,34,65	0/0:15,3,1:20:0,21,100,36,96,130	1/2:0,3,3:8:38,19,23,32,0,47
+chr21	45438327	chr21:45438327:M	CACACACACACACTCACACACTCAGACACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/1:2,4:7:51,0,17	0/1:4,3:11:31,0,48	0/1:5,6:15:66,0,78
+chr21	45438371	chr21:45438371:M	CACACACACACACTCACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:35,0:36:0,108,255	0/0:25,0:25:0,75,255	0/1:17,15:32:255,0,255
+chr21	45442905	chr21:45442905:M	GGTGGTGGTGCTGGTGTGGGCGGTGGTGGTGCTGGTG	<6.3>,<11.3>	.	.	Motif=GGT	GT:AD:DP:PL	0/1:8,8,3:20:134,0,255,133,56,191	0/1:9,4,2:15:55,0,243,63,72,128	1/2:2,11,8:21:255,64,246,214,0,209
+chr21	45452843	chr21:45452843:M	ATGTATGTATGT	<2.5>	.	.	Motif=ATGT	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:22,13:35:255,0,255	1/1:0,28:28:255,84,0
+chr21	45470482	chr21:45470482:M	TTTTTTTTTTGTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,12:33:116,0,255	0/1:9,8:18:97,0,100	0/0:18,0:19:0,55,255
+chr21	45479340	chr21:45479340:M	ACACACACTACACACAC	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:18,11:29:255,0,255	0/1:13,14:27:255,0,255	0/0:44,0:44:0,132,255
+chr21	45479602	chr21:45479602:M	CACACACACACACACA	<7>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,15:26:218,0,135	0/1:17,17:34:213,0,208	0/1:18,15:33:191,0,241
+chr21	45484083	chr21:45484083:M	ACACACACACAC	<7>	.	.	Motif=AC	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:12,2:14:0,5,182	0/1:15,5:20:35,0,223
+chr21	45484399	chr21:45484399:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	0/1:27,5:32:4,0,255	0/0:21,0:21:0,62,255	0/1:18,12:30:141,0,250
+chr21	45495709	chr21:45495709:M	CACACATACACGCACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	0/1:23,19:42:208,0,255	0/1:25,18:44:175,0,255	1/1:0,44:46:255,129,0
+chr21	45511050	chr21:45511050:M	ACACCCACACCCATCCACACCCCCACACACCACACACACA	<7>	.	.	Motif=ACACCC	GT:AD:DP:PL	0/1:5,6:11:83,0,65	1/1:0,8:8:154,24,0	0/0:10,0:10:0,30,196
+chr21	45515164	chr21:45515164:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,19:29:255,0,84	1/1:4,34:40:255,34,0	0/0:32,1:34:0,72,255
+chr21	45519571	chr21:45519571:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:71,0,0	1/1:0,9:9:151,26,0	0/1:1,1:3:9,0,20
+chr21	45521021	chr21:45521021:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,14:24:195,0,85	1/1:2,37:39:255,80,0	0/0:35,2:37:0,73,255
+chr21	45527941	chr21:45527941:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,14,12:28:255,183,255,219,0,255	0/2:13,1,9:23:88,136,255,0,171,169	1/1:0,20,0:22:255,64,0,255,65,255
+chr21	45537725	chr21:45537725:M	CCCACCCACCCAC	<2.2>	.	.	Motif=CCCA	GT:AD:DP:PL	0/1:12,4:16:20,0,153	0/1:6,2:8:9,0,72	0/1:10,7:17:65,0,114
+chr21	45541025	chr21:45541025:M	AAGAAGAAGAAGAA	<6.7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,43:43:255,129,0	0/1:24,16:40:255,0,255	1/1:0,35:35:255,105,0
+chr21	45558796	chr21:45558796:M	TTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:10,12:23:153,0,108	0/0:12,1:13:0,20,199
+chr21	45566179	chr21:45566179:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,18,168	0/1:8,3:12:25,0,98	0/0:15,2:19:0,21,242
+chr21	45591594	chr21:45591594:M	ACACACCATCACACCACACACACAAAACACATCACATAGAGACACACACCACACACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:24,13:37:231,0,255	0/1:11,4:23:87,0,255	0/1:17,4:21:42,0,255
+chr21	45597422	chr21:45597422:M	TTTATTTATTTATTTATTTATTTATTTATT	<6.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:18,11:29:127,0,255	0/0:31,0:31:0,91,255	0/1:16,18:34:238,0,201
+chr21	45616060	chr21:45616060:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,47,0	0/1:4,19:23:255,0,1	1/1:2,21:23:255,32,0
+chr21	45624081	chr21:45624081:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:6:69,0,0	0/1:3,5:8:59,0,26	0/1:8,9:17:103,0,86
+chr21	45627812	chr21:45627812:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:17:78,0,115	0/1:8,4:14:28,0,113	1/1:2,14:16:209,12,0
+chr21	45641986	chr21:45641986:M	TTTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:10:233,88,60,79,0,53	1/2:0,6,7:13:255,118,81,101,0,64	0/1:6,8,1:16:188,0,137,117,135,244
+chr21	45644506	chr21:45644506:M	TTTTTTTCTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,36:38:255,74,0	1/1:0,46:47:255,138,0	0/1:15,27:42:255,0,157
+chr21	45645239	chr21:45645239:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:42:255,124,0	1/1:0,39:39:255,115,0	1/1:0,38:39:255,115,0
+chr21	45646054	chr21:45646054:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCT	<26.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,3:6:64,16,0	1/1:0,3:6:44,11,0	1/1:0,5:6:56,13,0
+chr21	45646108	chr21:45646108:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,8,0,8:20:255,235,206,255,167,255,197,0,232,208	1/3:0,4,0,6:14:255,200,188,206,124,203,82,0,93,75	2/3:0,0,5,8:17:255,255,255,176,176,131,122,128,0,83
+chr21	45647063	chr21:45647063:M	AAAAAAAAAACAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,42:42:255,124,0	0/1:18,20:38:255,0,223
+chr21	45652443	chr21:45652443:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:82,0,101	0/1:9,6:15:60,0,111	0/0:20,1:23:0,49,255
+chr21	45654339	chr21:45654339:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,14,81	0/1:4,1:5:2,0,53	0/1:1,4:6:63,0,0
+chr21	45659338	chr21:45659338:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:60,0,85	0/0:8,1:11:0,14,130	0/0:11,0:11:0,32,189
+chr21	45662272	chr21:45662272:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,3:19:255,78,30,255,0,255	1/2:0,10,6:19:255,173,140,255,0,243	1/1:0,9,0:10:255,30,0,255,30,255
+chr21	45663159	chr21:45663159:M	TCTCCTCTCTCTCTCTCTCTCTCTC	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,38:39:255,114,0	1/1:0,37:37:255,109,0
+chr21	45664005	chr21:45664005:M	TTTTTCTTTTTTTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,21:23:255,31,0	1/1:0,18:18:255,53,0	1/1:1,23:25:255,56,0
+chr21	45664213	chr21:45664213:M	AATAATAATAATATAAGAATAATAATAATA	<4.3>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,9:9:249,27,0	1/1:0,9:9:249,27,0	0/1:17,8:25:146,0,255
+chr21	45664591	chr21:45664591:M	TTTTATTTTTTTTAATTTTTTTTTTCTTTTCTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,17:26:255,0,169	0/1:12,12:24:255,0,255	0/0:28,0:28:0,84,255
+chr21	45667076	chr21:45667076:M	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTC	<9.2>,<10.2>,<17.2>	.	.	Motif=TTCT	GT:AD:DP:PL	1/3:0,11,0,8:19:255,221,188,255,220,255,255,0,211,255	1/3:0,10,0,6:16:255,165,135,255,164,255,255,0,180,255	1/2:0,11,8,0:19:255,129,96,206,0,153,255,150,207,255
+chr21	45669788	chr21:45669788:M	TGTGTGTGTGTGTGTGTGT	<8.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:5,3,4:15:52,43,113,0,16,175	0/1:2,3,0:5:21,0,10,36,24,141	0/1:5,1,0:8:12,0,37,36,59,181
+chr21	45669806	chr21:45669806:M	TATATATATATATATATATATATATATATATATATATATAT	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:10:222,13,0	1/1:0,0:2:27,5,0	0/0:1,0:4:0,8,48
+chr21	45676368	chr21:45676368:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,11:37:101,0,255	0/1:20,22:42:255,0,236	0/1:25,28:53:255,0,255
+chr21	45678306	chr21:45678306:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,3,10:26:115,76,255,0,88,100	0/2:15,3,15:33:141,147,255,0,149,133	0/1:25,9,0:35:159,0,255,221,255,255
+chr21	45678319	chr21:45678319:M	AATAATAATAATAAAATAA	<8.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:12,10:27:168,0,251	0/1:19,10:33:147,0,255	1/1:0,27:36:255,33,0
+chr21	45679079	chr21:45679079:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:33,0,48	0/1:5,4:10:42,0,58	1/1:0,4:5:71,12,0
+chr21	45684056	chr21:45684056:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:7:14,0,68	0/1:1,4:5:52,0,2	0/1:5,2:8:11,0,72
+chr21	45685916	chr21:45685916:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:7:32,0,42	0/1:2,2:5:29,0,19	0/0:6,0:6:0,18,103
+chr21	45691385	chr21:45691385:M	TATATATATATATATCTCATATATATATTATATATATATAAAATATATATATCATATATAT	<32.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,5:18:57,0,167	1/1:0,1:1:20,3,0	0/1:3,2:5:27,0,47
+chr21	45691457	chr21:45691457:M	TGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,1:34:0,78,255	0/0:17,0:21:0,46,193	0/1:11,12:23:75,0,63
+chr21	45696793	chr21:45696793:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,27:42:255,0,158	0/1:27,18:48:190,0,255	0/0:33,1:34:0,82,255
+chr21	45697755	chr21:45697755:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:19,0,128	0/0:13,1:16:0,18,206	0/1:19,4:24:1,0,255
+chr21	45714436	chr21:45714436:M	ACACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:26,17:43:182,0,255	0/0:44,0:44:0,130,255
+chr21	45721413	chr21:45721413:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:10:76,0,41	0/1:5,4:10:49,0,55	1/1:0,8:10:159,29,0
+chr21	45731869	chr21:45731869:M	CTTTTTTTTTTCTTTTGCTTT	<3.7>	.	.	Motif=CTTTTT	GT:AD:DP:PL	0/1:15,16:31:255,0,252	0/1:21,24:46:255,0,255	0/0:46,1:47:0,117,255
+chr21	45732505	chr21:45732505:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:34:0,80,255	0/0:38,2:41:0,84,255	0/1:22,21:43:255,0,255
+chr21	45740584	chr21:45740584:M	GTGTGTGTGTGCATGTGAGTGTGTGTGTGGTGTGTGTAGTGTGTGTGTGTGTGTGAAGTGTGTGTG	<34>,<36>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,0,4:15:73,101,245,0,176,255	0/2:4,0,2:6:41,50,99,0,62,95	0/1:5,9,0:16:104,0,39,143,80,255
+chr21	45744119	chr21:45744119:M	TATATATATATATACATATGTATGTATATAACATATATAT	<21>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,16:40:189,0,255	0/1:14,12:26:140,0,175	0/0:43,1:44:0,111,255
+chr21	45750396	chr21:45750396:M	CCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	.	.	1/1:0,4:5:125,15,0
+chr21	45750897	chr21:45750897:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,23:52:255,0,255	0/1:22,22:45:255,0,255	0/0:48,0:48:0,144,255
+chr21	45752969	chr21:45752969:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,2:6:17,0,45	0/1:2,0:3:2,0,24	0/1:2,3:7:51,0,14
+chr21	45757891	chr21:45757891:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:30:184,0,191	0/1:14,16:32:197,0,163	1/1:1,27:30:255,70,0
+chr21	45776463	chr21:45776463:M	TCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTGTCTCCCTCT	<10.8>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:11,11:25:75,0,74	0/1:7,9:17:66,0,42	0/0:18,0:18:0,50,220
+chr21	45786127	chr21:45786127:M	AATAAAAAAATAAATAAATAAATAAATAAAT	<8>,<8.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/2:13,2,9:24:107,130,255,0,191,196	0/1:10,4,2:16:43,0,204,50,134,213	0/1:25,4,0:29:4,0,255,86,255,255
+chr21	45786290	chr21:45786290:M	TTTTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:1,27:30:255,70,0	0/1:27,11:38:91,0,255
+chr21	45789425	chr21:45789425:M	TGTGTATGTGTA	<1.7>	.	.	Motif=TGTGTA	GT:AD:DP:PL	0/1:21,18:39:255,0,255	0/1:17,18:35:255,0,255	0/0:37,0:37:0,111,255
+chr21	45795310	chr21:45795310:M	TTTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:36:0,105,255	0/0:27,1:30:0,70,255	0/1:25,10:38:69,0,255
+chr21	45810219	chr21:45810219:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGTGTGTGTG	<22>,<26>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,0,4:21:56,106,255,0,255,255	0/2:17,0,8:27:182,232,255,0,255,255	0/1:8,10,0:19:123,0,99,178,151,255
+chr21	45810430	chr21:45810430:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,18:38:234,0,243	0/1:26,19:45:203,0,255	0/0:24,2:29:0,48,255
+chr21	45816743	chr21:45816743:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,1,10:27:110,167,255,0,239,236	0/2:11,0,17:28:222,255,255,0,166,114	0/1:18,15,1:34:178,0,243,255,255,255
+chr21	45823723	chr21:45823723:M	TTTTTTTTTTATTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,75,0	1/1:0,40:45:255,114,0	1/1:2,35:42:255,77,0
+chr21	45826259	chr21:45826259:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:31:0,90,255	0/1:10,15:27:183,0,106	0/0:25,0:26:0,76,255
+chr21	45831409	chr21:45831409:M	AAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:255,41,0	0/1:5,14:20:255,0,82	0/1:1,13:16:255,0,1
+chr21	45831704	chr21:45831704:M	AGTTAGTTAGTTAGTT	<5>	.	.	Motif=AGTT	GT:AD:DP:PL	0/1:30,17:47:190,0,255	0/1:17,18:35:224,0,206	0/1:22,13:35:141,0,255
+chr21	45840457	chr21:45840457:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:13:1,0,134	0/1:6,7:17:90,0,63	0/1:9,3:12:16,0,120
+chr21	45842389	chr21:45842389:M	TTTGTTTGTTTGTTTGTTTGTT	<4.5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:21,15:36:183,0,255	0/1:20,29:49:255,0,219	0/0:40,0:40:0,118,255
+chr21	45851607	chr21:45851607:M	ATAGATGGATGGATAGATAGATAGATAGATAGATAG	<8>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:17,15:32:189,0,224	0/1:18,13:31:139,0,227	0/1:26,16:43:182,0,255
+chr21	45868412	chr21:45868412:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,71	1/1:0,4:8:68,12,0	0/1:6,1:10:6,0,80
+chr21	45877796	chr21:45877796:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,22:41:255,0,238	0/1:16,18:35:228,0,183	0/1:22,23:45:255,0,255
+chr21	45919815	chr21:45919815:M	GTGTGTGTGTGTGTGTGTGTGTG	<7.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,12:32:249,0,176	0/1:18,12:35:227,0,255	0/1:6,13:29:255,0,137
+chr21	45975615	chr21:45975615:M	GTGTGGGTGTGGGTG	<1.5>	.	.	Motif=GTGTGG	GT:AD:DP:PL	0/1:12,20:32:255,0,137	0/0:36,0:37:0,108,255	0/1:12,28:41:255,0,111
+chr21	45977004	chr21:45977004:M	TGGGGGTGGGGGTGGGGGTGGGGGTGG	<3.5>	.	.	Motif=TGGGGG	GT:AD:DP:PL	0/1:3,7:10:105,0,28	1/1:0,10:10:181,29,0	0/1:9,8:17:100,0,119
+chr21	45980161	chr21:45980161:M	ATAATAATAATAATAATAA	<5.3>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:14,16:30:216,0,179	1/1:0,34:34:255,100,0	0/1:13,14:27:180,0,162
+chr21	45980178	chr21:45980178:M	AAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAAGGAGAAG	<22.5>	.	.	Motif=AAGGAG	GT:AD:DP:PL	0/1:20,7:27:10,0,255	0/0:25,0:25:0,75,255	0/0:19,1:20:0,47,255
+chr21	46016495	chr21:46016495:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	0/1:19,15:35:165,0,246	1/1:1,49:50:255,129,0
+chr21	46018181	chr21:46018181:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,18,15:34:255,255,193,255,0,240	0/2:17,0,18:36:255,255,255,0,255,255	1/2:0,19,17:36:255,255,206,255,0,244
+chr21	46019068	chr21:46019068:M	TTTTTTTTTTTT	<13>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,8,7:17:255,255,255,129,124,81,162,147,0,119	1/2:1,17,6,0:26:255,140,100,255,0,255,255,98,255,255	2/2:1,0,21,3:26:255,255,255,44,62,0,255,255,9,255
+chr21	46031087	chr21:46031087:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:31:182,0,201	1/1:3,20:23:255,15,0	0/1:12,13:25:159,0,140
+chr21	46032166	chr21:46032166:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:24:96,0,195	1/1:1,22:24:255,53,0	0/1:18,7:25:52,0,249
+chr21	46043985	chr21:46043985:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:6,4:10:39,0,74	0/0:15,0:16:0,47,255
+chr21	46044147	chr21:46044147:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,10:22:255,171,120,161,0,139	1/2:2,7,8:18:255,111,97,67,0,91	1/2:1,6,8:15:255,123,99,72,0,74
+chr21	46053697	chr21:46053697:M	ACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,13:40:242,0,255	0/1:24,22:48:255,0,255	0/0:32,0:34:0,101,255
+chr21	46068541	chr21:46068541:M	TGTGTGTGTGTGTGTGCATGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,15:16:255,47,0	1/1:0,14:16:255,44,0	1/1:0,14:14:253,41,0
+chr21	46068644	chr21:46068644:M	GTGTGTGTGTGCGTGTGTGTGCGTGTG	<8.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:3,0:3:0,9,136	0/0:4,0:4:0,12,175	0/1:1,7:9:187,0,29
+chr21	46068728	chr21:46068728:M	GTGTGTGTGTG	<4.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,5:20:28,0,198	0/0:9,0:9:0,26,149	0/1:7,8:15:92,0,73
+chr21	46068804	chr21:46068804:M	GTGTGTGTGTGTG	<5.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:22,8:30:68,0,255	0/0:33,0:33:0,97,255	1/1:0,17:17:255,50,0
+chr21	46068849	chr21:46068849:M	TGTGCATGTGTGTGCAAGTCCATGTGTGTGCATGTGCATGTG	<4.3>	.	.	Motif=TGTGCA	GT:AD:DP:PL	0/0:13,0:15:0,20,255	0/0:19,0:19:0,57,255	0/1:0,3:4:87,0,9
+chr21	46068913	chr21:46068913:M	TGTGTGTGTGTGCATGTGTGCCTGGGTGTGTGTGGGTGTGTG	<10>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,9:16:255,0,50	1/1:0,20:21:255,58,0	0/0:5,0:5:0,15,137
+chr21	46069242	chr21:46069242:M	GTGTGTGTGTGCGTGTGTGTGTGCGCATGTGTGTCTGGGTGTGTGCGCGTGTGTGCGTGTGCGTGTGTG	<27.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,3:8:47,0,94	0/0:6,0:6:0,18,145	1/1:0,11:11:255,33,0
+chr21	46070708	chr21:46070708:M	AAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAA	<33>,<34>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,6:17:255,91,61,138,0,142	2/2:0,0,11:11:255,220,192,33,32,0	1/1:3,18,0:21:255,8,0,255,61,255
+chr21	46090107	chr21:46090107:M	TGTTGTTGTTGTTG	<3.7>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:1,6:7:147,0,3	1/1:0,4:4:112,12,0	0/0:17,0:17:0,51,255
+chr21	46090714	chr21:46090714:M	TGGTGATGGTGATGATGATGGCAATGGTGATAATGGTGATGGGGTGATGGTGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTG	<22.5>	.	.	Motif=TGGTGA	GT:AD:DP:PL	1/1:0,3:5:32,4,0	1/1:0,4:8:47,9,0	1/1:0,4:5:51,11,0
+chr21	46090809	chr21:46090809:M	AGTAGTAGTAGT	<45>	.	.	Motif=AGT	GT:AD:DP:PL	0/1:2,3:5:23,0,42	0/1:1,3:4:26,0,17	0/1:1,3:4:26,0,18
+chr21	46090843	chr21:46090843:M	TGATGGTGATGATGATG	<45>	.	.	Motif=TGA	GT:AD:DP:PL	0/1:7,3:10:8,0,164	0/0:10,3:13:0,1,239	0/1:9,3:12:2,0,212
+chr21	46097062	chr21:46097062:M	CAGACACAGACACACACCACACACAGATACACACACCACAGACTCAAACTCAGTCTCAGACACAGACACA	<2.3>	.	.	Motif=CAGACA	GT:AD:DP:PL	0/1:11,34:45:255,0,147	0/1:7,26:33:255,0,80	0/1:11,17:28:255,0,198
+chr21	46097121	chr21:46097121:M	ACACAGACACACACCACACACTCAGATGCACACACCACACACACTCAGTCTCAGACACACACACACACCACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,8:14:255,0,115	0/1:11,8:19:250,0,230	0/1:6,5:11:192,0,124
+chr21	46099890	chr21:46099890:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:4:23,0,23	0/1:1,3:7:36,0,13	0/0:4,0:4:0,12,67
+chr21	46101848	chr21:46101848:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	.	1/1:0,9:10:255,30,0
+chr21	46102707	chr21:46102707:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,48:52:255,134,0	1/1:2,42:46:255,99,0	1/1:0,30:42:255,10,0
+chr21	46116917	chr21:46116917:M	ACACACGCATACACACACACACACACACACACACACACAC	<22>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/2:8,0,4:13:90,113,255,0,207,195	2/2:0,0,7:8:212,212,212,24,24,0	0/1:10,9,0:20:198,0,227,234,255,255
+chr21	46123600	chr21:46123600:M	GATGGATGAATGGATGGATTGCTGGATGAGTGGGTGGGTGGATGGAT	<12.8>	.	.	Motif=GATG	GT:AD:DP:PL	0/1:12,3:15:14,0,184	1/1:0,21:21:255,62,0	0/0:31,0:31:0,91,255
+chr21	46123892	chr21:46123892:M	TGGATAGATGGATGGGTGGGTGGATAGAGGATGGATGG	<4.8>	.	.	Motif=TGGA	GT:AD:DP:PL	0/0:21,0:21:0,63,255	0/0:28,0:28:0,84,255	0/1:3,7:12:167,0,97
+chr21	46123969	chr21:46123969:M	GTGAGTGAGTG	<1.8>	.	.	Motif=GTGA	GT:AD:DP:PL	0/1:17,15:32:195,0,235	1/1:0,36:36:255,106,0	0/0:26,0:26:0,77,255
+chr21	46141304	chr21:46141304:M	TTTTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,12:24:156,0,153	1/1:1,21:23:255,50,0	0/0:34,1:35:0,85,255
+chr21	46141717	chr21:46141717:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:207,0,206	1/1:1,37:40:255,99,0	0/0:40,0:42:0,123,255
+chr21	46147290	chr21:46147290:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:31:255,91,0	1/1:1,30:34:255,81,0	1/1:1,39:41:255,92,0
+chr21	46147943	chr21:46147943:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:17,0,52	0/0:12,0:15:0,40,216	1/1:0,13:13:222,38,0
+chr21	46162591	chr21:46162591:M	TTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:9:230,54,28,108,0,84	1/2:0,1,4:5:128,68,55,18,0,3	1/2:0,5,5:11:255,88,60,89,0,60
+chr21	46164795	chr21:46164795:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:12:56,0,93	0/1:5,11:16:144,0,40	0/0:14,0:17:0,49,255
+chr21	46171429	chr21:46171429:M	AAAAAAAAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,10:25:255,179,214,255,0,255	1/1:0,23,0:25:255,75,0,255,75,255	2/2:0,0,17:19:255,255,255,55,56,0
+chr21	46171940	chr21:46171940:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:13:180,0,74	1/1:0,11:11:255,33,0	0/0:9,1:10:0,4,219
+chr21	46174333	chr21:46174333:M	AAAAAACAAAACAAAAAAAAAAAAAAAA	<20>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:4:82,0,0,85,9,93	1/1:0,3,0:5:119,15,0,119,15,119	0/2:1,0,8:11:109,140,255,0,39,10
+chr21	46179076	chr21:46179076:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:214,0,161	1/1:2,19:25:255,20,0	0/0:19,0:21:0,60,255
+chr21	46184714	chr21:46184714:M	CCACCACCACCACCA	<4>	.	.	Motif=CCA	GT:AD:DP:PL	0/1:22,19:41:115,0,152	0/1:26,20:46:110,0,181	0/1:37,13:50:18,0,255
+chr21	46186838	chr21:46186838:M	TTTGTTTGTTTGATTTCTTTTTTGT	<5.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,25:27:255,71,0	1/1:0,31:34:255,88,0	0/1:8,26:36:255,0,10
+chr21	46198268	chr21:46198268:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:40:255,98,0	1/1:0,31:32:255,94,0	0/1:16,22:40:255,0,171
+chr21	46198830	chr21:46198830:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,4:7:52,69,131,0,30,18	0/2:1,0,2:5:33,34,65,0,5,6	0/1:3,6,2:11:71,0,42,68,10,160
+chr21	46201802	chr21:46201802:M	TTTTTTTTTTTTTT	<11>,<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,14,8:25:255,255,255,113,224,173,231,255,0,255	2/2:0,0,22,0:23:255,255,255,67,66,0,255,255,69,255	1/3:0,21,0,8:30:255,142,158,255,219,255,255,0,255,255
+chr21	46218728	chr21:46218728:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:14:0,41,243	0/1:12,4:16:22,0,158	0/0:24,0:24:0,70,255
+chr21	46221363	chr21:46221363:M	TTTATTTTATT	<2.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,35:35:255,105,0	1/1:0,36:36:255,108,0
+chr21	46226136	chr21:46226136:M	AAAAAAAAAAAAAAAATACAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,4:26:14,0,255	0/0:18,0:19:0,55,255	0/1:7,12:21:170,0,64
+chr21	46227705	chr21:46227705:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:33:0,93,255	0/0:36,0:43:0,113,255	0/1:18,12:32:241,0,255
+chr21	46228807	chr21:46228807:M	CCGCCCAGCCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCC	<7>	.	.	Motif=CCGCC	GT:AD:DP:PL	0/1:3,2:7:35,0,57	1/1:0,5:6:122,15,0	0/1:1,4:6:80,0,8
+chr21	46229190	chr21:46229190:M	GGGCGGGGGCGGGG	<3.3>	.	.	Motif=GGGCGG	GT:AD:DP:PL	0/1:12,3:15:14,0,187	0/0:11,0:11:0,32,200	0/1:6,6:12:77,0,78
+chr21	46232748	chr21:46232748:M	AAAAAACAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,26:54:255,0,255	1/1:0,33:33:255,97,0	0/0:40,0:40:0,118,255
+chr21	46237101	chr21:46237101:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,11:13:188,220,255,20,36,0	2/2:1,0,9:10:136,163,255,12,27,0	1/2:1,8,4:16:191,67,88,147,0,219
+chr21	46242986	chr21:46242986:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:46:0,118,255	0/0:30,1:32:0,77,255	0/1:15,21:36:234,0,136
+chr21	46247124	chr21:46247124:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/0:32,0:33:0,87,255	0/1:18,14:34:165,0,236
+chr21	46248617	chr21:46248617:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:31:0,88,255	0/0:37,1:39:0,97,255	0/1:22,15:40:158,0,255
+chr21	46251882	chr21:46251882:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:6:18,0,41	0/0:2,0:4:0,11,57	1/1:1,6:8:86,3,0
+chr21	46257925	chr21:46257925:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:19:0,55,255	0/0:15,1:17:0,32,248	0/1:5,5:11:64,0,56
+chr21	46258738	chr21:46258738:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:21,26,0:47:255,0,255,255,255,255	1/1:0,51,0:51:255,150,0,255,153,255	0/2:20,0,14:34:255,255,255,0,255,255
+chr21	46259905	chr21:46259905:M	AAAAAAAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,15:25:255,0,145	0/0:8,0:9:0,26,227	0/1:9,18:31:255,0,173
+chr21	46261733	chr21:46261733:M	AAAAAAAAAAAAAAAAAGAAAGAAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,6:13:70,91,250,0,115,81	2/2:0,0,16:16:255,255,255,47,47,0	0/1:11,14,2:27:255,0,232,212,160,255
+chr21	46274939	chr21:46274939:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:28,0,63	0/0:7,1:9:0,10,111	1/1:0,1:4:16,2,0
+chr21	46276741	chr21:46276741:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9,0:26:113,0,204,181,236,255	1/1:0,23,0:25:255,73,0,255,75,255	0/2:9,1,4:14:32,53,217,0,120,132
+chr21	46278165	chr21:46278165:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:38:0,108,255	0/0:41,1:45:0,104,255	0/1:21,30:51:255,0,255
+chr21	46278990	chr21:46278990:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,4:20:19,0,198	0/1:8,4:15:34,0,112	0/0:22,4:29:0,4,255
+chr21	46280813	chr21:46280813:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:37,1:38:0,94,255	0/1:21,14:35:139,0,255
+chr21	46285613	chr21:46285613:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,0:37:0,108,255	0/0:36,0:38:0,111,255	0/1:20,14:34:155,0,255
+chr21	46288016	chr21:46288016:M	AAAAAAAAAAGAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:29:0,85,255	0/0:27,1:29:0,65,255	0/1:20,19:39:235,0,255
+chr21	46288678	chr21:46288678:M	AAAAAGAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:28:0,77,255	0/0:28,0:29:0,84,255	0/1:11,21:33:255,0,202
+chr21	46290211	chr21:46290211:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/0:42,2:44:0,94,255	0/1:28,19:47:212,0,255
+chr21	46291020	chr21:46291020:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:25:0,55,255	0/0:15,1:20:0,27,243	0/1:15,5:20:30,0,208
+chr21	46294759	chr21:46294759:M	AAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,82,0	1/1:0,19:23:255,67,0	1/1:0,35:36:255,108,0
+chr21	46299048	chr21:46299048:M	TTTTTTTTTTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,8:17:255,195,177,87,0,176	2/2:0,1,10:13:255,248,247,15,3,0	1/2:0,3,9:13:255,231,227,37,0,57
+chr21	46301144	chr21:46301144:M	TTTTTATTTTATTTTT	<2.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	1/1:0,33:33:255,91,0	1/1:0,41:41:255,113,0	1/1:0,29:29:255,80,0
+chr21	46302072	chr21:46302072:M	TGGTGGTGGTGGTGGTGGTGGTG	<8.7>	.	.	Motif=TGG	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:29,0:29:0,85,255	0/1:18,11:29:122,0,253
+chr21	46303678	chr21:46303678:M	ACACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,5:14:55,0,15	0/0:11,0:13:0,34,133	1/1:1,4:7:51,8,0
+chr21	46303709	chr21:46303709:M	ATATATATATATATATATATATATATATATATATATAT	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:0,0,3:7:80,57,73,0,18,3	1/2:0,4,3:11:255,54,22,101,0,71	0/0:0,0,0:2:0,3,9,3,9,9
+chr21	46303746	chr21:46303746:M	TTTTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:0,0,0:2:2,4,8,0,3,1	2/2:0,0,3:4:106,80,71,12,9,0	1/2:0,4,2:8:163,46,28,94,0,81
+chr21	46304021	chr21:46304021:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:39,0,5	0/0:1,0:1:0,3,16	1/1:0,4:4:66,12,0
+chr21	46305328	chr21:46305328:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,3,5:12:81,45,138,25,0,99	0/2:5,0,4:9:42,68,187,0,71,59	0/2:6,1,2:9:9,17,122,0,70,95
+chr21	46306070	chr21:46306070:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:104,0,96	0/0:23,1:24:0,53,255	1/1:1,24:26:255,58,0
+chr21	46309462	chr21:46309462:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:24:134,0,133	1/1:1,24:26:255,59,0	0/1:15,4:20:12,0,215
+chr21	46320513	chr21:46320513:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:56,5,0	1/1:0,5:8:183,23,0	0/0:1,0:2:0,4,33
+chr21	46321902	chr21:46321902:M	TTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:11:211,87,92,127,0,118	0/2:1,0,5:9:131,143,194,0,31,8	0/1:1,5,0:10:131,0,26,139,28,178
+chr21	46327386	chr21:46327386:M	TTTTCTTTTTCTTTTTTTTTCTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:35:0,105,255	0/0:35,0:35:0,105,255	0/1:23,11:34:196,0,255
+chr21	46335690	chr21:46335690:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:4,4,9:18:76,66,159,17,0,65	0/1:11,7,0:19:41,0,77,92,100,250	0/2:13,1,8:22:34,82,255,0,108,105
+chr21	46336987	chr21:46336987:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTG	<7>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,36:37:255,108,0	1/1:0,36:36:255,106,0
+chr21	46338605	chr21:46338605:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:1,22:25:255,55,0	1/1:0,14:16:255,46,0
+chr21	46341947	chr21:46341947:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:23:255,49,0	1/1:1,26:28:255,64,0	1/1:2,31:35:255,66,0
+chr21	46353716	chr21:46353716:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,10:22:255,255,255,255,0,255	1/1:0,27,0:28:255,84,0,255,84,255	0/2:8,0,9:20:218,253,255,0,203,158
+chr21	46358598	chr21:46358598:M	TTTTTGTTGTTGTTGTTGTTTTGTTGTTTTGTTTTTTTTTTTTTT	<7.7>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:9,6:16:17,0,33	0/0:16,0:16:0,38,126	1/1:0,10:10:79,24,0
+chr21	46360214	chr21:46360214:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:6,0,34	0/0:8,0:9:0,26,143	0/1:1,4:6:60,0,0
+chr21	46360521	chr21:46360521:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:2,17:21:255,26,0	1/1:1,17:19:255,37,0
+chr21	46367311	chr21:46367311:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:17:0,47,255	0/0:22,0:23:0,67,255	0/1:7,9:17:119,0,75
+chr21	46371215	chr21:46371215:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,20:28:227,25,0	1/1:1,12:15:154,26,0	0/1:9,6:16:37,0,77
+chr21	46373432	chr21:46373432:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:255,30,0	1/1:1,7:11:202,1,0	0/1:2,4:7:96,0,37
+chr21	46374850	chr21:46374850:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	0/1:3,2:6:19,0,35	0/1:5,2:7:14,0,65
+chr21	46381197	chr21:46381197:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,4,2,0:6:161,31,14,62,0,45,134,26,62,124	1/1:0,8,1,0:11:255,33,0,158,16,129,255,30,156,246	2/3:0,2,7,4:13:255,179,149,62,30,24,128,58,0,94
+chr21	46395592	chr21:46395592:M	AATAATAATAAAATA	<6>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:40,10:50:42,0,255	0/1:42,16:58:118,0,255	0/1:46,16:62:115,0,255
+chr21	46398805	chr21:46398805:M	TTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:3,0,58	0/0:6,1:8:0,6,102	0/1:2,4:6:53,0,18
+chr21	46400513	chr21:46400513:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:12,0,12	1/1:0,1:2:17,3,0	0/1:1,3:4:40,0,6
+chr21	46408720	chr21:46408720:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:116,0,63	1/1:0,8:10:157,29,0	0/0:15,0:15:0,44,255
+chr21	46409191	chr21:46409191:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:8:249,24,0	0/1:0,4:7:110,0,5	0/1:6,2:10:25,0,187
+chr21	46413995	chr21:46413995:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,50,0	1/1:0,20:21:255,61,0	0/1:15,11:28:107,0,162
+chr21	46414456	chr21:46414456:M	CCTCCTCCTCCT	<7>	.	.	Motif=CCT	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,5:5:137,15,0	0/0:13,0:13:0,39,255
+chr21	46438670	chr21:46438670:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:13:0,2,163	0/0:10,2:12:0,1,137	0/1:6,7:13:85,0,68
+chr21	46444648	chr21:46444648:M	TTTTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,10:27:255,184,205,255,0,255	1/1:0,20,0:22:255,66,0,255,66,255	1/2:0,10,16:29:255,255,255,255,0,228
+chr21	46449317	chr21:46449317:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:36:0,87,255	0/0:28,1:35:0,74,255	0/1:22,9:34:61,0,255
+chr21	46453744	chr21:46453744:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,6:14:174,93,133,98,0,137	1/1:0,21,0:23:255,67,0,255,69,255	1/2:4,6,6:19:131,53,138,60,0,143
+chr21	46463681	chr21:46463681:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:7,0,12:19:255,199,255,0,117,140	0/0:17,1,0:21:0,42,255,57,255,255	1/2:1,7,8:16:255,116,88,82,0,81
+chr21	46464818	chr21:46464818:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<33>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,1:5:114,16,5,49,0,37	2/2:0,0,4:5:142,88,75,15,14,0	0/0:0,0,0:1:0,0,0,0,0,0
+chr21	46467296	chr21:46467296:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,7:18:137,0,170	1/1:0,3:3:81,9,0	0/1:10,5:16:89,0,225
+chr21	46468262	chr21:46468262:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:27,0,9	0/1:1,3:4:39,0,5	1/1:0,4:5:80,14,0
+chr21	46468413	chr21:46468413:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:33:132,0,155	1/1:0,16:20:255,53,0	0/1:11,9:24:95,0,104
+chr21	46470475	chr21:46470475:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,12:33:123,0,255	0/0:21,0:22:0,64,255	0/1:7,17:25:240,0,52
+chr21	46470764	chr21:46470764:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/0:14,0:15:0,44,251	0/1:13,5:18:36,0,178
+chr21	46476080	chr21:46476080:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,28:32:255,39,0	1/1:0,31:33:255,96,0	1/1:1,25:29:255,66,0
+chr21	46476243	chr21:46476243:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:2,30:33:255,61,0	0/1:20,16:37:185,0,255
+chr21	46476653	chr21:46476653:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:8:181,47,32,91,0,69	2/2:0,0,4:5:71,62,59,12,4,0	0/2:6,0,4:12:41,52,217,0,106,86
+chr21	46477544	chr21:46477544:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,8:14:255,195,177,149,0,125	2/2:0,0,3:3:85,85,85,9,9,0	1/2:0,4,1:6:122,24,10,98,0,95
+chr21	46477741	chr21:46477741:M	TTTTTTTGTTTTGTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,13:13:255,39,0	0/1:10,10:20:213,0,214
+chr21	46480058	chr21:46480058:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13,2:16:255,42,0,253,10,213	2/2:2,2,17:23:255,230,255,27,18,0	0/1:8,6,0:15:135,0,190,113,141,218
+chr21	46485237	chr21:46485237:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:38,1:39:0,96,255	0/0:32,2:34:0,64,255	0/1:16,27:43:255,0,172
+chr21	46492932	chr21:46492932:M	AAAAAAAAAAGGAAGAAAAAAAAAA	<24>,<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,17,10:28:255,255,255,195,196,117,255,255,0,237	3/3:0,0,2,15:18:255,255,255,255,255,241,48,53,17,0	1/2:1,14,18,0:33:255,255,255,236,0,255,255,255,255,255
+chr21	46496071	chr21:46496071:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:33,6,0	1/1:0,1:1:16,3,0	1/1:0,6:6:99,17,0
+chr21	46502303	chr21:46502303:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:34:0,99,255	0/0:36,0:36:0,106,255	0/1:12,18:30:248,0,136
+chr21	46503326	chr21:46503326:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7:10:120,9,0	1/1:0,12:14:225,40,0	0/1:6,5:13:71,0,68
+chr21	46503572	chr21:46503572:M	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<8.8>,<12.8>	.	.	Motif=CTTC	GT:AD:DP:PL	1/2:0,0,1:2:33,21,22,15,0,12	2/2:0,0,3:3:64,71,84,9,9,0	1/1:0,5,0:8:111,15,0,124,15,161
+chr21	46506725	chr21:46506725:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTCTTTCTTCTCTTT	<14.5>,<18>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,10,2:15:255,94,65,255,0,250	2/2:0,0,18:18:255,255,255,54,54,0	1/1:0,8,0:10:218,11,0,222,24,236
+chr21	46506805	chr21:46506805:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:8,2:12:5,0,107	0/1:6,10:17:126,0,65
+chr21	46508043	chr21:46508043:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,7:19:73,0,165	0/0:25,1:27:0,61,255	0/1:18,6:24:37,0,254
+chr21	46508354	chr21:46508354:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	1/1:0,2:3:44,9,0	0/1:3,4:8:47,0,31
+chr21	46510628	chr21:46510628:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,6:8:102,122,210,6,24,0	2/2:0,0,6:8:126,143,206,23,24,0	1/2:1,4,6:13:202,86,157,117,0,113
+chr21	46512801	chr21:46512801:M	AAAAAAAAAAACAAACAAAACAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,18:33:255,0,231	1/1:0,29:37:255,100,0	0/0:46,0:46:0,138,255
+chr21	46514436	chr21:46514436:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:27:0,60,255	0/0:25,0:25:0,73,255	0/1:11,14:25:180,0,126
+chr21	46515453	chr21:46515453:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,85,255	0/0:29,0:30:0,88,255	0/1:26,20:47:224,0,255
+chr21	46523394	chr21:46523394:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,2:7:38,0,122	1/1:0,5:5:138,15,0	0/0:1,0:3:0,6,40
+chr21	46524873	chr21:46524873:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:14:255,37,0	1/1:0,4:4:107,12,0	1/1:0,5:5:146,15,0
+chr21	46525864	chr21:46525864:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>,<15>,<17>	.	.	Motif=ATT	GT:AD:DP:PL	2/3:0,1,14,6:21:255,255,255,159,139,112,255,237,0,255	3/3:0,0,0,5:5:146,146,146,144,144,141,15,15,15,0	1/2:0,8,8,0:16:255,144,98,144,0,98,255,144,144,255
+chr21	46527326	chr21:46527326:M	TTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:145,18,0	1/1:0,8:9:250,27,0	1/1:0,0:2:22,5,0
+chr21	46528528	chr21:46528528:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:142,18,0	1/1:0,3:3:77,9,0	.
+chr21	46529606	chr21:46529606:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,13:31:156,0,220	1/1:0,24:24:255,70,0	0/0:36,1:41:0,99,255
+chr21	46536904	chr21:46536904:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,66,0	1/1:1,19:20:255,41,0	0/1:15,16:32:193,0,185
+chr21	46538371	chr21:46538371:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/1:18,20:38:255,0,236	0/0:24,0:24:0,71,255	0/1:29,15:44:152,0,255
+chr21	46547657	chr21:46547657:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:153,26,0	1/1:0,3:4:60,11,0	0/1:2,0:5:12,0,34
+chr21	46548175	chr21:46548175:M	TGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,12:16:255,0,61	1/1:1,15:16:255,21,0	0/0:20,0:21:0,63,255
+chr21	46569484	chr21:46569484:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,17:30:231,0,122	0/0:23,0:25:0,70,255	0/1:25,17:48:197,0,255
+chr21	46587158	chr21:46587158:M	AAAAACAAAAACAAAAACAA	<2.3>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,53:53:255,156,0	1/1:0,52:52:255,154,0
+chr21	46589944	chr21:46589944:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,19:40:255,0,236	0/0:23,3:27:0,26,255	0/1:17,18:36:233,0,203
+chr21	46599781	chr21:46599781:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:35:255,0,172	0/0:37,0:37:0,109,255	0/1:31,22:53:252,0,255
+chr21	46611501	chr21:46611501:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:3,0:6:0,13,62	1/1:0,3:5:50,9,0
+chr21	46616504	chr21:46616504:M	TGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:13,26:39:255,0,185	0/0:13,1:14:0,19,255	0/1:7,21:28:255,0,78
+chr21	46616522	chr21:46616522:M	TATATATATATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,24:37:255,72,0	0/0:0,0:6:0,6,21	1/1:0,19:27:255,49,0
+chr21	46617772	chr21:46617772:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTAT	<12.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:9,13:23:255,0,190	1/1:0,41:41:255,123,0	0/1:6,19:25:255,0,92
+chr21	46632747	chr21:46632747:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,19:34:252,0,178	0/1:5,28:38:255,0,1	0/1:18,12:31:127,0,245
+chr21	46641124	chr21:46641124:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:9:220,24,0	1/1:0,4:6:111,12,0	1/1:0,11:11:255,33,0
+chr21	46641720	chr21:46641720:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,31:33:255,98,0	1/1:0,30:31:255,93,0	1/1:0,27:28:255,84,0
+chr21	46643476	chr21:46643476:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:16:244,29,0	0/1:2,7:11:94,0,12	0/1:2,6:8:80,0,11
+chr21	46645092	chr21:46645092:M	AAAAAAAAAATTAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10:23:122,0,166	0/0:37,0:37:0,109,255	0/1:21,10:31:94,0,255
+chr21	46645267	chr21:46645267:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,28:43:255,255,255,188,0,82	2/2:4,0,35:39:255,255,255,54,111,0	1/2:0,13,29:43:255,255,255,196,0,77
+chr21	46657377	chr21:46657377:M	AAAAAAAAAAAAAACAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,21:42:255,0,229	0/0:25,0:28:0,81,255	0/1:20,17:38:188,0,251
+chr21	46666304	chr21:46666304:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,16:23:233,0,62	0/0:30,1:31:0,74,255	0/1:6,6:13:82,0,72
+chr21	46668752	chr21:46668752:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,20,20:41:255,255,255,255,0,255	1/1:0,38,0:38:255,114,0,255,112,255	1/2:1,24,26:51:255,255,255,255,0,255
+chr21	46675495	chr21:46675495:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:209,22,0	1/1:0,15:15:255,44,0	1/1:1,17:18:255,35,0
+chr21	46676397	chr21:46676397:M	TTTTTTTTTTTTTCTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,13:25:170,0,116	1/1:0,19:20:255,59,0	0/1:16,10:26:100,0,203
+chr21	46688832	chr21:46688832:M	ACACACACACACACACACACACACACACACACA	<12.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,10:31:255,144,193,255,0,255	1/2:0,30,4:35:255,56,9,255,0,255	1/2:0,29,11:42:255,159,194,255,0,255
+chr21	46699291	chr21:46699291:M	CGCGCCGCGCC	<3.2>	.	.	Motif=CGCGC	GT:AD:DP:PL	0/0:20,0:20:0,56,255	0/0:61,3:64:0,140,255	0/1:1,3:4:28,0,2
diff --git a/trtools/mergeSTR/tests/mydir/test_PopSTRRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_PopSTRRightFilecurrent
new file mode 120000
index 00000000..f0d9bce6
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_PopSTRRightFilecurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0/test.vcf b/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0/test.vcf
new file mode 100644
index 00000000..f2b55045
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0/test.vcf
@@ -0,0 +1,28 @@
+##fileformat=VCFv4.1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0358_BXD40_TyJ_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0358_BXD40_TyJ/res_chr1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr1,length=182113224>
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
+##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
+##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
+##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
+##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
+##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
+##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
+##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
+##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
+##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
+##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
+##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	BXD196_0366	BXD40_TyJ_0358
+chr1	3004986	.	TCTGTCTGTCTG	.	.	.	END=3004997;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999912:3,3:3-3,3-3:17,12,0,2:3,17:2,2:193.56:366.612,131.36:0.0,0.0:0.0,5.1188e-05,0.999949	0/0:10:0.888534:3,3:3-3,3-3:6,4,0,0:3,6:NULL:61.3218:326.675,113.385:0.0,0.0:4.48253e-20,0.0502949,0.949783
+chr1	3005549	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3005568;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:181.959:366.612,131.36:0.0,0.0:0.0,8.11654e-06,0.999994	0/0:15:0.997039:4,4:4-4,4-4:12,3,0,0:4,12:NULL:73.0332:326.675,113.385:0.0,0.0:1.26878e-38,0.00169958,0.998307
diff --git a/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigscurrent b/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigscurrent
new file mode 120000
index 00000000..fe9120e4
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigscurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0/test.vcf b/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0/test.vcf
new file mode 100644
index 00000000..6d37b92a
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0/test.vcf
@@ -0,0 +1,341 @@
+##fileformat=VCFv4.1
+##command=HipSTR-v0.6.1 --bam-files /pedigree/projects/s1saini/hipstr.1kg/bam.afr.list --fasta /pedigree/projects/s1saini/ref/human_g1k_v37.fasta --regions bedfile.10 --str-vcf str.chr21.10.vcf.gz --bam-samps HG02561,HG02562,HG02620,HG02621,HG02721,HG02722,HG02768,HG02769,HG02771,HG02772,HG02851,HG02852,HG02973,HG02974,HG02982,HG02983,HG03039,HG03040,HG03063,HG03064,HG03069,HG03096,HG03097,HG03099,HG03100,HG03120,HG03121,HG03129,HG03130,HG03168,HG03169,HG03246,HG03247,HG03300,HG03301,HG03306,HG03307,HG03445,HG03451,HG03452,HG03484,HG03485,HG03520,HG03521,HG03574,HG03575,HG03577,HG03578,HG03582,HG03583 --lib-from-samp --log log.part10.txt
+##command=HipSTR-v0.6.1 --bam-files /pedigree/projects/s1saini/hipstr.1kg/bam.afr.list --fasta /pedigree/projects/s1saini/ref/human_g1k_v37.fasta --regions bedfile.10 --str-vcf str.chr21.10.vcf.gz --bam-samps HG02561,HG02562,HG02620,HG02621,HG02721,HG02722,HG02768,HG02769,HG02771,HG02772,HG02851,HG02852,HG02973,HG02974,HG02982,HG02983,HG03039,HG03040,HG03063,HG03064,HG03069,HG03096,HG03097,HG03099,HG03100,HG03120,HG03121,HG03129,HG03130,HG03168,HG03169,HG03246,HG03247,HG03300,HG03301,HG03306,HG03307,HG03445,HG03451,HG03452,HG03484,HG03485,HG03520,HG03521,HG03574,HG03575,HG03577,HG03578,HG03582,HG03583 --lib-from-samp --log log.part10.txt
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=1,length=249250621>
+##contig=<ID=2,length=243199373>
+##contig=<ID=3,length=198022430>
+##contig=<ID=4,length=191154276>
+##contig=<ID=5,length=180915260>
+##contig=<ID=6,length=171115067>
+##contig=<ID=7,length=159138663>
+##contig=<ID=8,length=146364022>
+##contig=<ID=9,length=141213431>
+##contig=<ID=10,length=135534747>
+##contig=<ID=11,length=135006516>
+##contig=<ID=12,length=133851895>
+##contig=<ID=13,length=115169878>
+##contig=<ID=14,length=107349540>
+##contig=<ID=15,length=102531392>
+##contig=<ID=16,length=90354753>
+##contig=<ID=17,length=81195210>
+##contig=<ID=18,length=78077248>
+##contig=<ID=19,length=59128983>
+##contig=<ID=20,length=63025520>
+##contig=<ID=21,length=48129895>
+##contig=<ID=22,length=51304566>
+##contig=<ID=X,length=155270560>
+##contig=<ID=Y,length=59373566>
+##contig=<ID=MT,length=16569>
+##contig=<ID=GL000207.1,length=4262>
+##contig=<ID=GL000226.1,length=15008>
+##contig=<ID=GL000229.1,length=19913>
+##contig=<ID=GL000231.1,length=27386>
+##contig=<ID=GL000210.1,length=27682>
+##contig=<ID=GL000239.1,length=33824>
+##contig=<ID=GL000235.1,length=34474>
+##contig=<ID=GL000201.1,length=36148>
+##contig=<ID=GL000247.1,length=36422>
+##contig=<ID=GL000245.1,length=36651>
+##contig=<ID=GL000197.1,length=37175>
+##contig=<ID=GL000203.1,length=37498>
+##contig=<ID=GL000246.1,length=38154>
+##contig=<ID=GL000249.1,length=38502>
+##contig=<ID=GL000196.1,length=38914>
+##contig=<ID=GL000248.1,length=39786>
+##contig=<ID=GL000244.1,length=39929>
+##contig=<ID=GL000238.1,length=39939>
+##contig=<ID=GL000202.1,length=40103>
+##contig=<ID=GL000234.1,length=40531>
+##contig=<ID=GL000232.1,length=40652>
+##contig=<ID=GL000206.1,length=41001>
+##contig=<ID=GL000240.1,length=41933>
+##contig=<ID=GL000236.1,length=41934>
+##contig=<ID=GL000241.1,length=42152>
+##contig=<ID=GL000243.1,length=43341>
+##contig=<ID=GL000242.1,length=43523>
+##contig=<ID=GL000230.1,length=43691>
+##contig=<ID=GL000237.1,length=45867>
+##contig=<ID=GL000233.1,length=45941>
+##contig=<ID=GL000204.1,length=81310>
+##contig=<ID=GL000198.1,length=90085>
+##contig=<ID=GL000208.1,length=92689>
+##contig=<ID=GL000191.1,length=106433>
+##contig=<ID=GL000227.1,length=128374>
+##contig=<ID=GL000228.1,length=129120>
+##contig=<ID=GL000214.1,length=137718>
+##contig=<ID=GL000221.1,length=155397>
+##contig=<ID=GL000209.1,length=159169>
+##contig=<ID=GL000218.1,length=161147>
+##contig=<ID=GL000220.1,length=161802>
+##contig=<ID=GL000213.1,length=164239>
+##contig=<ID=GL000211.1,length=166566>
+##contig=<ID=GL000199.1,length=169874>
+##contig=<ID=GL000217.1,length=172149>
+##contig=<ID=GL000216.1,length=172294>
+##contig=<ID=GL000215.1,length=172545>
+##contig=<ID=GL000205.1,length=174588>
+##contig=<ID=GL000219.1,length=179198>
+##contig=<ID=GL000224.1,length=179693>
+##contig=<ID=GL000223.1,length=180455>
+##contig=<ID=GL000195.1,length=182896>
+##contig=<ID=GL000212.1,length=186858>
+##contig=<ID=GL000222.1,length=186861>
+##contig=<ID=GL000200.1,length=187035>
+##contig=<ID=GL000193.1,length=189789>
+##contig=<ID=GL000194.1,length=191469>
+##contig=<ID=GL000225.1,length=211173>
+##contig=<ID=GL000192.1,length=547496>
+##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
+##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
+##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
+##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
+##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
+##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
+##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
+##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
+##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
+##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
+##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
+##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
+##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
+##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
+##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
+##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
+##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
+##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
+##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
+##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
+##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
+##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02561	HG02562
+21	9412359	STR_868537	AAAAAAAAAAAA	AAAAAAAAAAAC,AAAAAAAAAAAAA,AAAAAAAAAAAAC	.	.	START=9412359;END=9412370;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|1:1.0:0.5:156:0:0|0:132.18|23.82:17.03:2:3:-21.15:0.0:140:0|115;1|18:0|111;1|16	0|3:0|1:1.0:0.5:129:0:0|0:92.19|36.81:38.68:3:3:-6.5:-0.17:120:-1|3;0|79;1|32:-1|3;0|71;1|27
+21	9416189	STR_868539	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	GTGTGTGTGTGTGTGTGTGTGTG,GTGTGTGTGTGTGTGTGTGTGTGTG,GTGTGTGTGTGTGTGTGTGTGTGTGTG,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	START=9416189;END=9416217;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9418366	STR_868540	CAAAAAAAACAAACAAACAAACAAAAACAAAACAAAACAAAA	CAAAAAAACAAACAAACAAACAAAAACAAAACAAAACAAAA,CAAAAAAAACAAACAAAGAAACAAAAACAAAACAAAACAAAA,CAAAACAAACAAACAAACAAACAAAAACAAAACAAAACAAAA,CAAAAAAAAACAAACAAACAAACAAAAACAAAACAAAACAAAA	.	.	START=9418366;END=9418407;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|1:0|-1:1.0:0.5:236:0:0|0:125.41|110.59:25.04:1:8:-0.58:-0.86:155:-1|47;0|59:-1|47;0|55
+21	9421431	STR_868541	TTTTTTTTTTTTTTT	TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,GTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT	.	.	START=9421431;END=9421445;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-3:1.0:0.5:224:0:0|0:126.03|97.97:17.33:113:4:-1.29:-0.65:222:-26|1;-15|3;-5|1;-3|23;-2|50;0|35;1|28;2|11;3|18:-5|1;-3|21;-2|42;0|31;1|24;2|10;3|16	0|1:0|-3:1.0:0.5:185:0:0|0:104.84|80.16:3.65:68:7:-1.14:-0.54:179:-15|1;-9|1;-5|7;-3|28;-2|29;0|32;1|13;3|18:-5|5;-3|26;-2|27;0|28;1|11;3|15
+21	9421591	STR_868542	TATTTTTTTTTTATTTTTATT	TATTTTTTTTAAAATTTTTATT,TATTTTTTTTTAAATTTTTATT,TATTTTTTTTTTAATTTTTATT	.	.	START=9421591;END=9421611;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|1:1.0:0.5:173:0:0|0:94.00|79.00:127.9:0:1:-0.54:0.0:173:0|57;1|38;12|1:0|58;1|40	0|1:0|1:1.0:0.5:151:0:0|0:96.00|55.00:59.55:0:0:-2.97:-0.4:151:-1|1;0|47;1|29:0|48;1|29
+21	9422104	STR_868543	TAATAATAATAATAA	TAATAATAAAAA,TAATAATAAAAAA,TAATAATAATAATA,TAATAATAATAAAAA	.	.	START=9422104;END=9422118;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9422279	STR_868544	AAAAAAAAAAA	AAAAAAAAAA,AAAAAGAAAA	.	.	START=9422279;END=9422289;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|-1:1.0:0.5:202:0:0|0:161.83|40.17:108.38:20:1:-19.15:-2.63:190:-1|45;0|118;1|1:-1|43;0|106;1|1	0|2:0|-1:1.0:0.5:148:0:0|0:96.63|51.37:94.87:14:3:-3.76:-1.8:146:-1|51;0|68:-1|51;0|60
+21	9424692	STR_868545	AAAAAAATAAAAAAA	.	.	.	START=9424692;END=9424706;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:224:0:0|0:112.00|112.00:.:0:0:0.0:0.0:-2147483648:0|182:0|172	0|0:0|0:1.0:1.0:217:0:0|0:108.50|108.50:.:0:2:0.0:0.0:-2147483648:0|178:0|164
+21	9431463	STR_868548	TTTTTTTTTCTTTTTTTTT	TTTTTTTTTTCTTTTTTTTT,TTTTTTTTTTTCTTTTTTTTT,TTTTTTTTTTTTCTTTTTTTTT	.	.	START=9431463;END=9431481;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|1:1.0:0.5:276:0:0|0:135.26|140.74:14.26:58:6:-3.3:-0.11:200:-24|1;0|64;1|63;2|12;3|32:0|57;1|56;2|12;3|28	0|2:0|2:1.0:0.5:226:0:0|0:102.77|123.23:5.27:91:4:-1.42:0.0:183:-1|1;0|24;1|39;2|57;3|32:0|22;1|38;2|52;3|31
+21	9434394	STR_868549	AATAAATAAATAAATAAATAAATAAATAAATAAATA	AAAAAATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATA,AAAAAATAAATAAATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,AAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	START=9434394;END=9434429;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|4:4|4:1.0:0.5:229:0:0|0:61.18|167.82:6.59:73:4:-12.87:-0.06:226:-20|1;-12|1;-11|1;-9|1;-8|1;-4|24;-2|1;0|34;4|41:-4|22;0|34;4|39	0|4:0|4:1.0:0.5:221:0:0|0:124.66|96.34:11.05:60:11:-2.15:0.0:170:-10|1;-9|2;-8|6;-4|34;0|39;4|26:-4|32;0|38;4|24
+21	9440656	STR_868550	AAAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAAAT	.	.	START=9440656;END=9440673;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|2:-2|-3:1.0:0.5:250:0:0|0:159.33|90.67:25.37:139:19:-5.33:-0.05:237:-11|1;-10|2;-5|36;-4|9;-3|43;-2|1;-1|26;0|36;1|24;2|1;7|4:-5|33;-4|9;-3|38;-2|1;-1|25;0|28;1|20	4|2:-1|-3:1.0:0.5:195:0:0|0:119.53|75.47:10.94:91:15:-2.84:-0.45:184:-17|1;-7|1;-4|58;-3|26;-2|1;-1|19;0|36;2|1;6|1:-4|55;-3|22;-2|1;-1|15;0|30
+21	9440894	STR_868551	AAAAAAAAAAAAA	AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAACAAAA	.	.	START=9440894;END=9440906;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|3:-2|1:1.0:0.5:210:0:0|0:104.83|105.17:4.37:58:14:-0.0:-0.19:165:-7|1;-4|6;-3|15;-2|58;-1|1;0|51;1|34:-4|5;-3|7;-2|58;0|41;1|33	1|3:-2|1:1.0:0.5:156:0:0|0:80.08|75.92:2.73:33:19:0.0:-0.24:118:-4|6;-3|11;-2|49;0|26;1|27;2|3:-4|2;-3|3;-2|44;0|22;1|23;2|3
+21	9446074	STR_868553	GTTTTGTTTTGTTTCGTTTTGTTTT	GTTTTGTTTTGTTTTGTTTTGTTTT,GTTTTGTTTTGTTTTGTTTTGTTTTTT	.	.	START=9446074;END=9446098;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|1:0|0:1.0:0.5:261:0:0|0:100.06|160.94:239.55:60:33:-7.92:-0.91:233:-11|2;-5|22;-3|1;0|106;1|13;4|12;5|18:-10|14;-5|22;0|114;5|19
+21	9446819	STR_868554	TCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC,TTTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTC	.	.	START=9446819;END=9446836;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9447407	STR_868555	GTGTGTGTCTGTGTGTGTGAGAGAGTGTGTGGTTTGTGTGT	GTGTATGTCTGTGGTTGTGAGAGAGTGTGTGGTTTGTGTGT,GTGTGTGTCTCTGTGTGTGAGAGAGTGTGTGGTTTGTGTGT	.	.	START=9447407;END=9447447;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|1:0|0:1.0:0.5:269:0:0|0:198.24|70.76:27.6:38:33:-19.55:-2.09:213:-2|10;0|120;2|44:0|105;2|27
+21	9447829	STR_868556	ATATATATATATATATATA	ATATATATATATATATA,ATATATATATATATATATATA,ATATATATATATATATATATATA,ATATATATATATATATATATATATATATATATATA,GTGTATATATATATATATATATATATATATATATA	.	.	START=9447829;END=9447847;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|5:4|16:1.0:0.5:155:0:0|0:111.24|43.76:26.36:90:13:-8.99:0.0:123:-32|4;-16|2;-8|1;-6|5;-1|1;0|22;2|10;4|16;6|15;8|21;10|1;12|5;20|10;22|1;28|2:0|16;2|9;4|14;6|14;8|20;10|2;12|5;20|11;22|1	.
+21	9448254	STR_868557	AAAAAAAAAAAAAAAAA	.	.	.	START=9448254;END=9448270;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9449020	STR_868558	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAGAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAATATATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA	.	.	START=9449020;END=9449052;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9454717	STR_868559	TATATATATATATATATAT	TATATATATAT,TATATATATATAT,TATATATATATATAT,TATATATATATATATAT,TGTATATATATATATAT,TATATATATATATATATATAT,TGTATATATATATATATATAT,TATATATATATATATATATATAT,TATATATATATATATATATATATAT	.	.	START=9454717;END=9454735;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	2|3:-6|-4:1.0:0.5:221:0:0|0:152.68|68.32:15.23:110:18:-9.83:-0.06:187:-49|3;-28|1;-24|2;-8|12;-6|58;-4|22;-2|23;0|48;20|1:-8|12;-6|60;-4|20;-2|22;0|44
+21	9456783	STR_868560	TAAAAATAAAAATAAAAA	.	.	.	START=9456783;END=9456800;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:368:0:0|0:184.00|184.00:.:14:42:0.0:0.0:-2147483648:-6|14;-1|5;0|238:-6|14;0|213	0|0:0|0:1.0:1.0:290:0:0|0:145.00|145.00:.:8:42:0.0:0.0:-2147483648:-6|5;-1|7;0|187:-6|8;0|158
+21	9464424	STR_868561	TGTGTGTGGGTGTGTGCGTGTGT	TGTGTGTGGGTGTGGGCGTGTGT,TGTGTGTGGGTGTGTGCTTGTGT	.	.	START=9464424;END=9464446;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:294:0:0|0:144.83|149.17:112.29:0:11:0.0:0.0:-2147483648:0|213:0|199	0|0:0|0:1.0:1.0:299:0:0|0:136.38|162.62:30.5:0:14:0.0:0.0:-2147483648:0|212:0|186
+21	9466444	STR_868562	AAAAAAAAAAAAAA	AAAAAAAAAAAA,AAAATAAAAAAA,AAAATATAAAAA,AAAAAAAAAAAAA	.	.	START=9466444;END=9466457;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|4:-2|-1:1.0:0.5:347:0:0|0:99.91|247.09:36.06:108:49:-15.82:-0.37:299:-13|1;-4|22;-3|30;-2|108;-1|71;0|47:-4|22;-3|22;-2|86;-1|73;0|35	3|4:-2|-1:1.0:0.5:283:0:0|0:96.02|186.98:14.66:106:39:-8.92:-0.48:240:-13|1;-5|1;-4|29;-3|6;-2|107;-1|31;0|53;2|1:-5|1;-4|26;-3|6;-2|85;-1|35;0|39
+21	9467572	STR_868563	ACACACACACACA	ATACACACACACA,ATACACACCCACA,ATACACACACACACA,ATACACACACACACACA	.	.	START=9467572;END=9467584;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|1:0|0:1.0:1.0:255:0:0|0:153.33|101.67:40.13:93:36:0.0:0.0:-2147483648:-19|1;-12|1;-2|4;0|188;2|2;4|16;8|1:-2|4;0|113;2|54;4|20	.
+21	9471184	STR_868564	TTTTTTTTTTTTT	TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT	.	.	START=9471184;END=9471196;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|-2:1.0:0.5:178:0:0|0:60.21|117.79:10.28:23:14:-7.66:-0.15:140:-5|4;-3|1;-2|89;-1|17;0|33;1|3:-4|3;-2|80;-1|13;0|30;1|2	.
+21	9472552	STR_868565	TTTTTCTTTTTTTTTTTTTTTTTTTT	TTTTTCTTTCTTTTTTTTTTT,TTTTTCTTTCTTTTTTTTTTTT,TTTTTCTTTCTTTTTTTTTTTTT,TTTTTCTTTTTTTTTTTTTTTTT,TTTTTCTTTCTTTTTTTTTTTTTT,TTTTTCTTTTTTTTTTTTTTTTTTT,TTTTTCTTTTCTTTTTTTTTTTTTTT,TTTTTCTTTTTCTTTTTTTTTTTTTTT	.	.	START=9472552;END=9472577;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|7:-3|0:1.0:0.5:202:0:0|0:114.88|87.12:10.27:107:7:-1.55:0.0:152:-7|1;-5|3;-4|54;-3|42;-2|4;0|19;3|1:-5|3;-4|49;-3|34;-2|3;-1|1;0|17	0|2:0|-4:1.0:0.5:166:0:0|0:63.10|102.90:15.13:38:12:-3.12:-0.23:129:-8|2;-7|1;-4|42;-3|14;-2|16;-1|1;0|23:-4|36;-3|10;-2|12;0|19
+21	9473251	STR_868566	GAAGGAAGGAAATAAGGAAGGAAGGAAGGAA	.	.	.	START=9473251;END=9473281;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:162:0:0|0:81.00|81.00:.:1:13:0.0:0.0:-2147483648:-16|1;-1|1;0|99;4|1:0|90
+21	9473327	STR_868567	GGAGGGAGGGAGGGAGGAAGGGAG	AGAGGGAGGGAGGGAGGAAGGGAG	.	.	START=9473327;END=9473350;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:179:0:0|0:89.50|89.50:43.17:4:24:0.0:0.0:-2147483648:-27|1;-20|1;-13|1;-11|1;-7|1;-4|1;0|111:-4|2;0|106	.
+21	9473387	STR_868568	AAGAAAGAATGAAAGAAAGAGAAAGAAAGGGAAAGAGAAAGAAAGAAAG	AAGAAAGAATGAAAGAAAGAAAGAAAGGGAAAGAGAAAGAAAGAAAG,AAGAAAGAAAGAAAGAAAGAGAAAGAAAGGGAAAGAGAAAGAAAGAAAG,AAGAAAGAAAGAAAGAATGAAAGAAAGAGAAAGAAAGAGGGAAAGAGAAAGAAAG,AAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAGGGAAAGAGAAAGAAAG,AAGAAAGAAAGAAAGAAAGAATGAAAGAAAGAGAAAGAAAGAGGGAAAGAGAAAGAAAG	.	.	START=9473387;END=9473435;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9473512	STR_868569	GGAAGGAAGGAAAAAGAGGAAAGGAAGGGAGGGAGGAAGGAAG	GGAAGGAAGGAAAAAGAGGAAAGGAAGGAGGGAGGAAGGAAG,GGAAGGAAGGAAAAAGAGGAAAGGAAGGGAGGAAGGAAGGAAG,GGAATGAAGGAAAAAGAGGAAAGGAAGGGAGGGAGGAAGGAAG	.	.	START=9473512;END=9473554;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9473577	STR_868570	AGAAAAAAGGAAAGAAAGCAAGAACGTGAGAAAGAAAGAAA	.	.	.	START=9473577;END=9473617;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9476998	STR_868571	ATAATAATAATAATA	ATAATAATAACA,ATAATAATAATAACA,ATAATAATAATGATA	.	.	START=9476998;END=9477012;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|0:0|0:1.0:0.5:182:0:0|0:103.63|78.37:135.1:4:6:-1.21:-0.13:152:-6|1;-3|1;0|122;3|2:-6|1;-3|1;0|115;3|1	1|3:-3|0:1.0:0.5:154:0:0|0:52.21|101.79:38.11:2:18:-5.54:-0.08:127:-9|2;-6|2;-3|31;0|79;3|3:-3|28;0|68
+21	9477945	STR_868572	AAAAAAAAAAA	AAAAAAAAAT,AAAAAGAAAAAATT	.	.	START=9477945;END=9477955;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-1|3:1.0:0.5:207:0:0|0:167.13|39.87:173.85:88:8:-19.77:-2.79:202:-1|64;0|41;1|25;2|21;3|30:-1|61;0|36;1|22;2|20;3|30	.
+21	9479232	STR_868573	AAAAAAAAAAA	AAAAAAAAAA,TAAAAAAAAAA	.	.	START=9479232;END=9479242;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9479299	STR_868574	GGGGGGGGGGGGG	GTGGGGGGGG,GTGTGGGGGG,GTGGGGGGGGG,GAGGGGGGGGGG,GGGGGGGGGGGG,GTGGGGGGGGGG,GAGGGGGGGGGGG,GAGGGGGGGGGGGG,GAGGGGGGGGGGGGG	.	.	START=9479299;END=9479311;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	5|2:-1|-3:1.0:0.5:126:0:0|0:45.08|80.92:14.31:41:1:-2.92:-0.24:125:-7|3;-5|1;-3|59;-2|6;-1|13;0|35:-3|59;-2|5;-1|13;0|30
+21	9485114	STR_868576	ATTTATTTATGTATTTATTT	.	.	.	START=9485114;END=9485133;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:247:0:0|0:123.50|123.50:.:0:0:0.0:0.0:-2147483648:0|173:0|168	0|0:0|0:1.0:1.0:183:0:0|0:91.50|91.50:.:0:1:0.0:0.0:-2147483648:0|130:0|128
+21	9487194	STR_868577	GAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	START=9487194;END=9487219;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-6:1.0:0.5:240:0:0|0:98.85|141.15:2.7:95:9:-2.5:-0.19:185:-23|2;-6|57;-4|33;-2|22;0|26;2|29;4|4;8|2;10|1;12|1:-6|57;-4|32;-2|22;0|22;2|29;4|1;6|1	0|1:0|-6:1.0:0.5:205:0:0|0:92.70|112.30:37.0:60:4:-0.56:-0.36:167:-14|1;-6|52;-4|31;-2|5;0|49;2|21;8|2:-6|50;-4|32;-2|5;0|44;2|20;6|1
+21	9488851	STR_868578	AATAATAATAATAATCATCATCATAATAA	AATAATAATAATAATAA,AATAATAATAATAATAATAA,AATAATAATAATCATCATCATAATAA,AATAATAATAATAATAATCATCATAATAA,AATAATAATAATAATAATAATAATAATAATA	.	.	START=9488851;END=9488879;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9489767	STR_868579	TATGTATATATGTATGTAT	TATGTATATATGTATGTAC	.	.	START=9489767;END=9489785;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:92:0:0|0:79.49|12.51:7.14:0:0:-14.5:-1.89:81:0|69:0|68	0|0:0|0:1.0:1.0:91:0:0|0:45.50|45.50:18.37:0:2:0.0:0.0:-2147483648:0|66:0|63
+21	9489871	STR_868580	ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTTATATATAAATATTATATATATATTATATATATATATAT	ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTTATATATAAATATTATAATATATATTATATATATATAT,ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTATATATAAATATTATATTATATATTATATATATATATAT,ATATATAATATATATTATATATTTGTATATAATTTATATATATAATATATATTATATATAAATATTATATTATATATTATATATATATATAT,ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTTATATATAAATATTATAATATATATTATATATATATATAT,ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTATATATTATATATAAATATTATATATATATTATATATATATATAT,ATATATAATATATATTATATGTTTATATATAATTTATATATATAATATATATTATATATTATATATAAATATTATATATATATTATATATATATATAT,ATATATGATATATATTATATATTTATATATAATTTATATATATAATATATATTATATATTATATATAAATATTATATATATATTATATATATATATAT,ATATATAATATATATTATATATTTATATATAATTTATATATATAACATATATTATATATTATATATAAATATTATATATATATTATATATATATATATATAT	.	.	START=9489871;END=9489962;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9500096	STR_868581	ATAATAATAATAATAATAATAA	ACAATAATAATAATAATAA,ATAATAATAATAATAATAA,ACAATAATAATAATAATAATAA	.	.	START=9500096;END=9500117;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-3|-3:1.0:0.5:129:0:0|0:19.99|109.01:13.47:8:2:-15.29:-3.69:129:-9|2;-3|93;0|6:-3|91;0|5	1|2:-3|-3:0.98:0.49:81:0:0|0:16.54|64.46:1.7:7:1:-7.23:-3.04:80:-3|52;0|7:-3|51;0|6
+21	9501362	STR_868582	CATTCATTCATTTACTTGTTCATTCATTCATT	CATTCATTCATTTACTCGTTCATTCATTCATT	.	.	START=9501362;END=9501393;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:213:0:0|0:69.25|143.75:175.51:0:1:-7.63:-0.73:176:0|129:0|127	0|1:0|0:1.0:0.5:195:0:0|0:89.57|105.43:271.29:0:3:-0.63:-0.37:158:0|118:0|114
+21	9501849	STR_868583	ATATATATATATATA	AATATATA,TATATATA,AATATATATA,TATATATATATA,AATATATATATATA,AAATATATATATATA,AAATATATATATATATA,ATATATATATATATATA	.	.	START=9501849;END=9501863;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9502317	STR_868584	TTCTCTTTCTCTTTCTCT	.	.	.	START=9502317;END=9502334;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:109:0:0|0:78.31|30.69:69.94:0:1:-6.14:-5.93:94:0|81:0|81	0|0:0|0:1.0:0.5:96:0:0|0:68.52|27.48:58.03:0:3:-5.25:-2.34:81:0|73:0|70
+21	9504302	STR_868585	TATATATAATATATATA	.	.	.	START=9504302;END=9504318;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:181:0:0|0:130.99|50.01:127.47:1:1:-9.81:-0.23:163:0|146;2|1:0|136;2|1	0|0:0|0:1.0:0.5:148:0:0|0:104.56|43.44:119.98:0:0:-7.09:-1.08:134:0|116:0|112
+21	9507278	STR_868586	TATATATATAAAATATATATATATATATATA	TATATATATAATATATATATATA,TATATATATAATATATATATATATATA,TATATATATAATATATATATATATATATA,TATATATATAAAATATATATATATATATATATA,TATATATATAATATATATATATATATATATATA,TATATATAAAAAAAAAAATATATATATATATATA,TATATATATAAAATATATATATATATATATATATA,TATATATATAAAATATATATATATATATATATATATATA,TATATATATAAAATATATATATATATATAATATATATATATATATATA,TATATATATAAAATATATATATATATATAATATATATATATATATATATA,TATATATATAAAATATATATATATATATAATATATATATATATATATATATA,TATATATATAAAATATATATATATATATATAATATATATATATATATATATA	.	.	START=9507278;END=9507308;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9519022	STR_868587	AAATAAGTAAATAAATAAA	.	.	.	START=9519022;END=9519040;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:148:0:0|0:74.00|74.00:.:0:0:0.0:0.0:-2147483648:0|104:0|103	0|0:0|0:1.0:1.0:157:0:0|0:78.50|78.50:.:0:3:0.0:0.0:-2147483648:0|116:0|111
+21	9522213	STR_868588	ATTCATTCATTCATT	.	.	.	START=9522213;END=9522227;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:165:0:0|0:133.63|31.37:27.91:0:1:-19.67:-0.36:134:0|117:0|111	0|0:0|0:1.0:1.0:168:0:0|0:84.00|84.00:44.2:0:1:0.0:0.0:-2147483648:0|135:0|130
+21	9525447	STR_868589	AAAAAAAAAAAAAAAA	AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAAAT	.	.	START=9525447;END=9525462;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	8|2:4|1:1.0:0.5:127:0:0|0:32.43|94.57:3.88:46:8:-8.15:-0.84:124:-39|1;-15|2;-5|1;0|15;1|30;2|1;3|20;4|13;5|6;6|5:0|12;1|29;3|19;4|9;5|5;6|3	8|2:4|1:1.0:0.5:105:0:0|0:52.77|52.23:5.52:31:13:0.0:0.0:95:0|6;1|25;2|13;3|8;4|12;5|8;6|8;7|2;9|1:1|27;2|5;3|8;4|12;5|5;6|8
+21	9531860	STR_868590	ATAGACAGATAGATAGATAGATAGATAGATAAGGTAGATAG	ATAAACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAAACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGACAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAAGGTAGATAG,ATAAACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAAACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATGGATAAGGTAGATAG	.	.	START=9531860;END=9531900;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|7:24|32:1.0:0.5:198:0:0|0:65.58|132.42:9.99:54:3:-6.57:-0.13:164:-20|4;-12|28;-10|1;-8|1;-6|1;-2|7;-1|1;2|5;3|1;6|7;10|1;11|1;20|4;22|1;24|20;28|11;32|6;44|7;52|3:20|5;24|19;28|11;32|6;44|7	3|10:28|36:1.0:0.5:196:0:0|0:77.12|118.88:5.67:53:2:-2.83:-0.3:152:-20|1;-12|26;-6|1;-2|1;-1|1;2|4;3|2;6|6;8|1;10|1;14|1;19|1;24|11;28|5;32|29;36|13:24|10;28|5;32|28;36|12
+21	9534565	STR_868591	CACACACACACA	.	.	.	START=9534565;END=9534576;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:157:0:0|0:90.98|66.02:.:0:0:0.0:0.0:-2147483648:0|136:0|131	0|0:0|0:1.0:1.0:127:0:0|0:67.00|60.00:.:0:1:0.0:0.0:-2147483648:0|106:0|101
+21	9538504	STR_868592	TATATATAATATATTATATATATA	TATATATATTATATATATA	.	.	START=9538504;END=9538527;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:201:0:0|0:103.96|97.04:583.43:0:0:0.0:0.0:-2147483648:0|137:0|128	0|0:0|0:1.0:1.0:181:0:0|0:74.00|107.00:441.26:0:0:0.0:0.0:-2147483648:0|133:0|125
+21	9544183	STR_868593	TGGCTCTGGCCCTGGCTCTGGCCCTGCCCCTTGTCCTGACCCTGGTCCTG	TGGCTCTGGCCCTCGCTCTGGCCCTGCCCCTTGTCCTGACCCTGGTCCTG	.	.	START=9544183;END=9544232;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:183:0:0|0:137.87|45.13:24.64:0:8:-18.68:-0.11:123:-25|2;-12|1;-6|1;0|85:0|81	0|1:0|0:1.0:0.5:182:0:0|0:114.29|67.71:122.24:0:13:-4.71:-0.08:124:-23|1;0|80:0|78
+21	9544525	STR_868594	CTGGCCCTGGCCCTAGCCCTGGTCCTGCCATATCCCTGGCCCTGCCCT	CTGGCCCTGGCCCTAGCCCTGGTCCTGCCATATCCCTGGGCCTGCCCT	.	.	START=9544525;END=9544572;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:182:0:0|0:81.93|100.07:87.51:0:14:-0.9:-0.99:124:-17|1;0|75:0|66	0|0:0|0:1.0:0.5:178:0:0|0:95.71|82.29:201.92:0:14:-0.59:-0.8:132:-35|1;0|78:0|70
+21	9544687	STR_868595	GACCCAGACCCAGACCCA	GACCCAGACCCAGACCCT	.	.	START=9544687;END=9544704;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:171:0:0|0:138.48|32.52:26.4:0:12:-21.4:-0.94:141:-24|1;-7|1;0|121:0|117	0|1:0|0:1.0:0.5:138:0:0|0:116.34|21.66:12.49:0:3:-19.93:-1.62:117:-7|1;0|95:0|96
+21	9545239	STR_868596	TGCCCTGCCCTGCCCTGCCCTG	TGCCCTGCCCTGCCCTTCCCTG,TGCCCTGCCCTGCCCTGCCCTGCCCTG	.	.	START=9545239;END=9545260;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:136:0:0|0:59.39|76.61:89.04:1:19:0.0:0.0:-2147483648:-4|1;0|102;1|1;22|1:0|85
+21	9545402	STR_868597	TGGCCCTGCCCTGGACCTGTCCTGGCCCTGGCCCT	TGGCCCTGCCCTGGACCTGTCCTGGCCCTGGTCCT,TGGCCCTGCCCTGGACCTGTCTTGGCCCTGGCCCT	.	.	START=9545402;END=9545436;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:167:0:0|0:83.48|83.52:152.28:1:14:0.0:-0.07:118:-50|1;-25|2;-23|1;-18|1;-17|1;-12|1;0|86:-6|1;0|80	0|1:0|0:1.0:0.5:141:0:0|0:65.21|75.79:146.59:0:18:-0.52:0.0:95:-32|1;-23|1;-9|1;0|77;1|1;54|1;56|1:0|70
+21	9545695	STR_868598	GGCCGTGGCCGTGGCCCTGGCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGCCCTGCCCTGGCCCT	GGCCATGGCCGTGGCCCTGGCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGCCCTGCCCTGGCCCT	.	.	START=9545695;END=9545768;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9545991	STR_868599	CCCTGGCCCTGCCCCTGCCCTTGCCCTTGCC	CCCTGGCCCTGTCCCTGCCCTTGCCCTTGCC	.	.	START=9545991;END=9546021;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:134:0:0|0:70.38|63.62:38.91:0:8:0.0:0.0:-2147483648:-52|1;0|78;4|1:0|74	0|0:0|0:1.0:1.0:142:0:0|0:65.90|76.10:94.15:0:14:0.0:0.0:-2147483648:-45|1;-8|1;-6|1;-5|1;-2|1;0|83:0|76
+21	9546087	STR_868600	TGGCCCTGCCCTGGCTCTGGCCCTGCCCCAGCCCTGGCCCTGCCCCGGCCC	TGGCCCTGCCCTGCCTCTGGCCCTGCCCCAGCCCTGGCCCTGCCCCGGCCC,TGGCCCTGCCCTGGCTCTGGCCCTGCCCCAGCCCTGGCCCTGCCCTGGCCC,TGGCCCTGCCCTGGCTCTGGCTCTGCCCCAGCCCTGGCCCTGCCCCGGCCC	.	.	START=9546087;END=9546137;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:130:0:0|0:66.43|63.57:96.38:1:15:0.0:0.0:-2147483648:-33|1;-17|2;-13|1;-7|1;0|63:0|56	.
+21	9546720	STR_868601	CTGGCCCTGGCCCTGTCCCAGCCCTGCTCTGGCCCTGG	.	.	.	START=9546720;END=9546757;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:144:0:0|0:74.78|69.22:.:0:11:0.0:0.0:-2147483648:-12|1;-7|2;-1|1;0|82:0|79	0|0:0|0:1.0:1.0:127:0:0|0:59.62|67.38:.:0:16:0.0:0.0:-2147483648:-28|2;-7|1;0|70:0|61
+21	9547185	STR_868602	GCCCTGGCCCTGGCCCTGGCCCTGGCCCTG	GCCCTGGCCCTGGCCCTGGCCCTG,GCCCTGGCCCTGGCCGTGGCCCTG,GCCCTAGCCCTGGCCCTGGCCCTGGCCCTG	.	.	START=9547185;END=9547214;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-6|-6:1.0:0.5:137:0:0|0:86.97|50.03:69.73:23:12:-3.38:-0.27:112:-11|1;-6|75;-4|1;0|24:-6|71;0|21	1|2:-6|-6:1.0:0.5:102:0:0|0:59.24|42.76:125.73:1:10:-1.28:-0.08:87:-22|1;-6|69;0|2:-12|1;-6|66
+21	9548648	STR_868603	CCTGCCCTGCCCTTCCATGCCCTGGCCTTGCCCTCACCCTGCATTGGCCCTGCACTGGTCCTGCCCTGCCCTG	CCTGCCCTGCCCTTCCGTGCCCTGGCCTTGCCCTCACCCTGCATTGGCCCTGCACTGGTCCTGCCCTGCCCTG	.	.	START=9548648;END=9548720;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9549052	STR_868604	TGCCCTGCCCTGGCCTTGCCCTGCCCTG	TGCCCTGCCCTGGCCTTGCCCTACCCTG,TGGCCTGCCCTGGCCTTGCCCTGCACTG	.	.	START=9549052;END=9549079;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9549157	STR_868605	TGACCCTGACCCTGGCCCTGAC	.	.	.	START=9549157;END=9549178;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:133:0:0|0:66.50|66.50:.:0:12:0.0:0.0:-2147483648:-44|1;-2|1;0|104:0|95	0|0:0|0:1.0:1.0:119:0:0|0:59.50|59.50:.:0:15:0.0:0.0:-2147483648:-40|1;-34|1;-28|1;-7|1;0|80;2|1;5|1:0|72
+21	9549316	STR_868606	GCCCCGCCCTACCCTGGCCTTGCCCTGCCCTGGCCCTGCC	.	.	.	START=9549316;END=9549355;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9550373	STR_868607	TAAATAAATAAATAAATAAATA	TAAATAAATAAATAAATAAATAAATA	.	.	START=9550373;END=9550394;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:185:0:0|0:98.97|86.03:75.32:23:4:0.0:0.0:-2147483648:-17|1;-8|1;0|92;4|15;12|2:0|87;4|15;12|2	0|0:0|0:1.0:1.0:150:0:0|0:81.48|68.52:47.79:14:4:0.0:0.0:-2147483648:-17|1;-8|1;-4|2;0|78;4|8;12|1:-4|1;0|76;4|8;12|1
+21	9550678	STR_868608	TAAAAATATAAATAAAAATAAGTAAAAATAAATATAAGTAAATATAAATATAAATACATATAAATATAAAAAT	TAAAAATATAAATAAAAATAAGTAAAAATAAATATAAGTAAATATAAATATAAATACATATAAAAAT	.	.	START=9550678;END=9550750;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:301:0:0|0:139.24|161.76:112.71:32:7:0.0:0.0:-2147483648:-6|17;0|68:-6|17;0|70	1|0:-6|0:1.0:0.5:238:0:0|0:99.60|138.40:81.78:0:3:-2.48:-1.07:160:-6|27;0|48:-6|28;0|48
+21	9550862	STR_868609	TGAGATGAGATGAAATGACAAAATGATGAGATGAGATGAGATGATGAGATGA	TGAGATGAGATGAAATGATGAGATGAAATGACAAAATGAGATGAGATGATGAGATGA,TGAGATGAGATGAAATGATGAGATGAAATGACAAAATGATGAGATGAGATGATGAGATGA,TGAGATGAGATGAAATGATGAGATGAAATGACAAAATGATGAGATGAGATGAGAAGATGAGATGA,TGAGATGAGATGAAATGATGAGATGAAATGACAAAATGATGAGATGAGATGAGATGATGAGATGA	.	.	START=9550862;END=9550913;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|13:1.0:0.5:162:0:0|0:111.88|50.12:15.01:29:7:-7.26:0.0:135:-39|1;-23|1;-15|1;-12|1;-10|1;-5|6;0|39;8|16;10|1;13|4:-5|5;0|35;8|16;13|5	0|3:0|13:1.0:0.5:149:0:0|0:97.77|51.23:69.31:13:6:-4.71:-0.16:119:-44|3;-31|1;-21|1;-20|1;-15|2;-5|2;-4|1;0|33;8|3;10|1;13|5:-5|2;0|33;8|5;13|5
+21	9561711	STR_868611	AAAAAAAAAAA	AAAAAAAAA,AAAAAAAAAA,AAAAAAACAA,AAAAAAGAAAA,AAAAAAAAAAAA	.	.	START=9561711;END=9561721;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9562967	STR_868612	TTTTTTTTTTTTTTTT	TTTTTTTTTTTATTTT,TTTTTTTTTTTTATTTT,TTTTTTTTTTTTTATTTT,TTTGTTTTTTTTTTTATGTT	.	.	START=9562967;END=9562982;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	3|4:2|4:1.0:0.5:189:0:0|0:155.58|33.42:51.44:88:5:-18.51:-0.36:184:-4|1;0|47;1|16;2|42;3|10;4|18;6|4;11|3:0|42;1|15;2|35;3|9;4|16;6|3
+21	9565451	STR_868613	TATGTATGTATGTATGT	TATGTATGTATGTATGTATGTATGTATGT,TATGTATGTATGTATGTATGTATGTATGTATGT,TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT,TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT,TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	START=9565451;END=9565467;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9568426	STR_868614	TTTTTTTTTTTTT	TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT	.	.	START=9568426;END=9568438;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|3:1.0:0.5:161:0:0|0:88.38|72.62:24.32:18:11:-0.57:-0.06:159:-9|4;-4|1;0|80;2|9;3|31;4|2;5|1:0|70;2|7;3|32;4|2;5|1	0|2:0|2:1.0:0.5:129:0:0|0:51.51|77.49:15.21:28:9:-1.59:-0.33:126:-9|2;-8|1;-2|1;0|47;1|5;2|34;3|20;4|1:0|40;1|5;2|33;3|22
+21	9569973	STR_868616	ACACTCACACACACAC	ACACACACACACACAC,ACACACACACACACGC,ACATTCACACACACAC	.	.	START=9569973;END=9569988;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:226:0:0|0:93.52|132.48:37.17:1:3:-3.68:0.0:199:0|186:0|178	0|0:0|0:1.0:0.5:189:0:0|0:70.72|118.28:5.5:3:9:-5.26:-1.41:155:-2|1;0|152;2|2:0|139;2|2
+21	9571586	STR_868617	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TTTTTTTTTTTTTTTTTTTTTT,CCTTTTTTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTTTTT	.	.	START=9571586;END=9571615;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9573172	STR_868618	TGTGCGTGTGTGTGTGGGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG	TGTGTGTGTGTGTGTGGGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG,TGTGTGTGTGTGTGTGGGTGTGTGCGTGTGTGTTTGTGTATGTATGTGTGTGTG,TGTGTGTGTGTGTGTGGGTGTGTGCGTGTGTGTGTGTGTGTGTGTATGTGTGTGTG,TGTGTGTGTGTGGGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG,TGTGTGTGTGTGTGTGGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTG,TGTGTGTGTGTGTGTGCGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTATGTGTG	.	.	START=9573172;END=9573233;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|6:-8|0:1.0:0.5:233:0:0|0:119.15|113.85:5.34:70:11:-0.17:0.0:199:-26|2;-24|3;-22|3;-16|1;-10|3;-8|13;-6|24;0|47:-10|2;-8|11;-6|24;0|42	3|6:-6|0:0.52:0.26:216:0:0|0:119.30|96.70:0.04:50:21:-0.81:-0.11:197:-36|1;-34|3;-28|1;-26|5;-18|1;-10|1;-8|18;-6|22;0|45;6|3:-10|1;-8|16;-6|21;0|30
+21	9574847	STR_868619	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAA	AAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA	.	.	START=9574847;END=9574876;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9575559	STR_868620	AAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA	.	.	START=9575559;END=9575573;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|2:0|1:1.0:0.5:78:0:0|0:46.47|31.53:17.79:3:6:-1.36:-1.02:56:-1|1;0|33;1|19;5|3:0|26;1|18
+21	9575950	STR_868621	TTTTCTATTTTCTATTTTTATTTTATTTTTATTTTT	.	.	.	START=9575950;END=9575985;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:118:0:0|0:81.87|36.13:57.35:0:0:-6.32:-0.73:84:0|48:0|48	0|0:0|0:1.0:1.0:110:0:0|0:55.00|55.00:21.65:0:1:0.0:0.0:-2147483648:0|42:0|41
+21	9579023	STR_868622	AAAAAAAAAAAAAAAAAGAAAA	AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAAAAAAAGAAAA	.	.	START=9579023;END=9579044;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|-6:1.0:0.5:109:0:0|0:62.66|46.34:2.36:42:15:-1.0:-0.08:84:-6|20;-5|9;-4|4;-2|10;0|15;1|14;2|2;3|3:-6|14;-5|9;-2|10;0|10;1|13;2|1	2|5:-6|-2:1.0:0.5:78:0:0|0:31.97|46.03:7.05:16:8:-0.94:-0.09:68:-6|19;-2|15;-1|11;0|4;1|1;3|1:-8|1;-6|16;-2|15;-1|10;0|1
+21	9579349	STR_868623	TTTTTTCTTTTTTTTTTTTTTTTTT	TTTTTTCTTTTTTTTTTTTTT,TTTTTTCTTTTTTTTTTTTTTTT,TTTTTTCTTTTTTCTTTTTTTTTT,TTTTTTCTTTTTTTTTTTTTTTTT,TTTTTTCTTTTCTTTTTTTTTTTTT	.	.	START=9579349;END=9579373;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	4|3:-1|-1:1.0:0.5:93:0:0|0:51.10|41.90:40.77:1:6:-0.58:0.0:79:-1|59;0|1;4|2:-1|49	4|3:-1|-1:1.0:0.5:88:0:0|0:47.71|40.29:31.53:0:7:-0.38:-0.61:74:-8|1;-6|1;-1|46;0|1;3|1;4|1:-1|42
+21	9579443	STR_868624	TTTTTTTTTTTTTTTTTT	TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT	.	.	START=9579443;END=9579460;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9579597	STR_868625	TTTTTTTTTTTTTTTTT	TTTTTTATTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT	.	.	START=9579597;END=9579613;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	1|5:-4|3:1.0:0.5:88:0:0|0:43.04|44.96:22.75:1:6:-0.13:-1.18:80:-45|1;-13|1;-7|3;-6|1;-4|33;3|27;5|2:-4|31;3|23;4|1
+21	9580555	STR_868626	TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATATA,TATATATATATATATATATATATATA,TATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATA,TATATATATGTGTGTGTATATATATATATATA,TATATATATGTGTGTGTATATATATATATATATA,TATATATATGTGTGTGTATATATATATATATATATATATATA,TATATATATGTGTGTATATATATATATATATATATATATATATA,TATATATATGTGTGTATATATATATATATATATATATATATATATA,TATATATATGTGTGTGTATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATA	.	.	START=9580555;END=9580616;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	5|11:-32|-18:1.0:0.5:54:0:0|0:30.23|23.77:6.76:5:8:-0.64:-1.61:34:-32|16;-18|6;-16|1;0|5:-32|16;-26|1;-18|4
+21	9584115	STR_868627	AAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,GAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,GAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AACTAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA	.	.	START=9584115;END=9584131;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9584267	STR_868628	ATTTATTTATTTATT	.	.	.	START=9584267;END=9584281;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:202:0:0|0:153.46|48.54:96.39:0:5:-14.32:0.0:190:0|151:0|144	0|0:0|0:1.0:0.5:190:0:0|0:140.53|49.47:137.03:0:4:-11.1:-0.67:181:0|148:0|143
+21	9588130	STR_868629	AAAAAAAAAAA	AAAAAAGAAAA,AAAAAAAAAAAA	.	.	START=9588130;END=9588140;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9588535	STR_868630	AAAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA	.	.	START=9588535;END=9588552;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|0:-1|0:1.0:0.5:148:0:0|0:95.30|52.70:10.4:47:11:-3.88:-1.25:123:-11|1;-3|4;-2|8;-1|40;0|26;1|22;2|5;6|1;7|2;13|1:-3|6;-2|6;-1|41;0|14;1|19;2|4	.
+21	9588886	STR_868631	TTTTTTTTTTTTTT	TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT	.	.	START=9588886;END=9588899;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	4|2:-3|-5:1.0:0.5:157:0:0|0:108.83|48.17:23.93:55:6:-5.97:-1.09:155:-6|23;-5|35;-4|14;-3|35;-1|15;0|2:-6|23;-5|33;-4|13;-3|31;-1|15	3|2:-4|-5:1.0:0.5:117:0:0|0:78.84|38.16:7.95:62:5:-3.72:-0.76:117:-6|19;-5|48;-4|7;-3|3;-2|13;-1|2;0|2:-6|20;-5|45;-4|7;-3|3;-2|13;-1|2
+21	9591586	STR_868632	TATATACATATATATATAT	TATATACATATATATAT,TATATACATATGTATAT,TATATACATATATATATATATAT	.	.	START=9591586;END=9591604;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-2|-2:1.0:0.5:164:0:0|0:110.29|53.71:78.32:61:2:-5.83:-1.03:139:-2|61;0|55:-2|59;0|54	1|2:-2|-2:1.0:0.5:156:0:0|0:92.28|63.72:92.28:49:0:-1.7:-0.5:145:-2|76;0|42:-2|72;0|41
+21	9591982	STR_868633	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG,TATGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG	.	.	START=9591982;END=9592001;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9646960	STR_868635	GATGGATGGATGGATGGATG	GATTGATGGATGGATG	.	.	START=9646960;END=9646979;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-4:1.0:0.5:133:0:0|0:106.88|26.12:19.35:22:1:-16.6:-1.02:118:-8|1;-4|28;0|55:-4|32;0|55	0|0:0|0:0.97:0.97:151:0:0|0:75.50|75.50:1.46:26:4:0.0:0.0:-2147483648:-18|1;-4|26;0|74:-4|24;0|72
+21	9647550	STR_868636	AAAAAAAAAAAAAAA	AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAATAAAAAA	.	.	START=9647550;END=9647564;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9655804	STR_868637	AAAAAAAAAAA	AAAAAAAAAA,AAAAAAAAAAAA	.	.	START=9655804;END=9655814;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:205:0:0|0:102.50|102.50:3.31:62:30:0.0:0.0:-2147483648:-11|1;-7|1;-1|17;0|101;1|34;2|11;4|1;24|2:-1|17;0|78;1|26;2|9	0|2:0|1:0.97:0.49:172:0:0|0:101.49|70.51:1.56:16:17:-1.78:-0.98:128:-1|2;0|89;1|33;2|7;3|4;24|1:-1|2;0|70;1|32;2|6;3|5
+21	9656261	STR_868638	ATTATTTTATTTTATCATTACTATTATTATTATTAT	.	.	.	START=9656261;END=9656296;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:185:0:0|0:92.50|92.50:.:8:15:0.0:0.0:-2147483648:-2|1;0|99;2|1;3|2;6|2;7|2;15|1;26|1:0|92
+21	9666046	STR_868639	TTTTTTTTTTCTTTT	TTTTTTTTCTTTT,TTTTTTTTTCCTTT,TTTTTTTTTCTTTT	.	.	START=9666046;END=9666060;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|-1:1.0:0.5:121:0:0|0:46.68|74.32:18.96:31:0:-5.37:-0.62:95:-2|21;-1|45;0|18:-2|21;-1|42;0|16	0|3:0|-1:1.0:0.5:131:0:0|0:53.90|77.10:18.45:35:2:-3.22:-0.08:106:-2|26;-1|49;0|21:-2|24;-1|47;0|19
+21	9668157	STR_868640	TTTTCATTTTTTTTCCTTTTCTTTTCTTTCTTTT	TTTTCATTGTTTTTCCTTTTCTTTTCTTTCTTTT	.	.	START=9668157;END=9668190;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:213:0:0|0:127.76|85.24:178.72:0:14:0.0:0.0:-2147483648:-8|8;0|113;1|3:0|113
+21	9669543	STR_868641	TGTGTGTGTGTGT	.	.	.	START=9669543;END=9669555;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:0.5:172:0:0|0:152.66|19.34:22.5:0:17:-26.63:-2.72:169:0|159;11|1:0|157
+21	9670999	STR_868642	ATATATATATATATATATATTTCTCTCTCTCTCTCTATATATATATATATAT	ATATATATATATATTTTCTCTCTCTCTCTCTCTATATATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTATATATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTCTATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTATATATATAT,ATATATATATATATATATTTTTCTCTCTCTCTCTCTCTATATATATATAT,ATATATATATATATATATTTTTCTCTCTCTCTCTCTCTCTATATATATAT,ATATATATATATATATATTTTTCTCTCTCTCTCTCTCTCTCTATATATAT,ATATATATATATATTTTTTTTTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTATATATATATATATATAT,ATATATATATATATATATATATTTCTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTATATATATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTCTATATATATATATATAT,ATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTCTATATATATATAT,ATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTATATATATATATATAT	.	.	START=9670999;END=9671050;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9672270	STR_868643	TTTTGTTTTTTTTTT	TTTTGTTTTTTTTT,TTTTGTTTTTGTTTTT,TTTTGTTTTTTTTTTT	.	.	START=9672270;END=9672284;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-1:1.0:0.5:132:0:0|0:82.30|49.70:29.27:1:1:-2.33:-0.07:129:-1|40;0|65;3|1:-1|40;0|60;3|1	0|1:0|-1:1.0:0.5:152:0:0|0:102.60|49.40:23.09:3:2:-5.1:-0.32:144:-1|37;0|85:-1|35;0|77
+21	9673580	STR_868644	TTTTTTTTTTTTTT	TTTTTTTTTTTT,TACTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTT	.	.	START=9673580;END=9673593;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9673899	STR_868645	TTTCTTTTGTTTTCTCTTTCTTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTTCTTTCTTTTTTTT	TTTCTTTTGTTTTCTCTTTCTTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTTATTTCTTTTTTTTT,TTTCTTTTGTTTTCTCTTTCTTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTTCTTTCTTTTTTTTT,TTTCTTTTGTTTTCTCTTTCTTTTCTTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTTCTTTCTTTTTTTT	.	.	START=9673899;END=9673963;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|1:1.0:0.5:212:0:0|0:112.06|99.94:96.08:14:29:-0.59:0.0:130:-7|1;-5|1;0|27;1|31;5|16;25|1:0|27;1|30;5|3	0|2:0|1:1.0:0.5:245:0:0|0:106.86|138.14:149.06:27:17:-1.73:-0.41:163:-17|2;-4|17;0|29;1|32;5|2;6|2:-4|15;0|27;1|30;6|1
+21	9675247	STR_868646	TTTTTTTTTTT	TTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT	.	.	START=9675247;END=9675257;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|2:0|-1:0.99:0.49:191:0:0|0:118.10|72.90:2.07:20:25:-0.0:-1.45:153:-12|1;-4|1;-3|1;-2|10;-1|66;0|83;1|1:-3|4;-2|10;-1|66;0|56
+21	9676026	STR_868647	AAAAAAAAAGAAAAAAGAAAAAA	.	.	.	START=9676026;END=9676048;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:190:0:0|0:140.94|49.06:11.67:26:11:-18.32:0.0:118:-14|1;-5|1;0|84;1|13;2|11;3|1;4|1:0|80;1|10;2|9;3|1	0|0:0|0:1.0:0.5:173:0:0|0:133.80|39.20:3.36:11:3:-20.9:0.0:113:0|86;1|11;2|2;3|1:0|84;1|8;2|1
+21	9676788	STR_868648	AAAATAAAATAAAATAAA	AAATAAAATAAAATAAA	.	.	START=9676788;END=9676805;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-1:1.0:0.5:120:0:0|0:76.00|44.00:129.08:1:10:-2.83:-0.08:103:-5|1;-3|1;-1|25;0|51;1|2;5|2;21|1:-5|1;-1|25;0|51	0|1:0|-1:1.0:0.5:151:0:0|0:99.49|51.51:89.46:1:7:-4.93:-1.25:118:-1|28;0|67;1|1:-1|27;0|65
+21	9676854	STR_868649	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT	.	.	START=9676854;END=9676895;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|13:-2|18:1.0:0.5:114:0:0|0:65.17|48.83:35.44:60:13:-1.03:-0.3:80:-18|1;-15|1;-10|1;-8|16;-7|3;-3|1;-2|1;0|13;2|7;4|4;5|1;10|1;12|5;14|5;16|8:-8|14;0|10;2|7;4|3;12|4;14|4;16|8	.
+21	9677576	STR_868650	AAAAAAAAAAAAA	AAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA	.	.	START=9677576;END=9677588;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+21	9682651	STR_868651	TTTTTTTCTTTTTTT	TATTTTTCTTTTTTT	.	.	START=9682651;END=9682665;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:134:0:0|0:62.61|71.39:155.06:4:7:0.0:0.0:-2147483648:-10|1;0|90;1|4:0|83;1|3	0|0:0|0:1.0:1.0:160:0:0|0:92.48|67.52:183.23:4:5:0.0:0.0:-2147483648:-14|1;-1|1;0|114;1|2:0|105;1|2
+21	9695816	STR_868652	AGACAGACAGACAGACAGA	AGACAGACAGACAGACAGACAGA,GGACAGACAGACAGACAGACAGA,AGACAGAGAGACAGACAGACAGACAGA,GGACAGACAGACAGACAGACAGACAGA	.	.	START=9695816;END=9695834;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|0:4|0:1.0:0.5:1129:0:0|0:549.06|579.94:312.73:215:23:-0.4:-6.23:874:-28|1;-15|3;-7|1;-5|6;0|400;4|129;5|1;8|177;12|2;16|1;20|2:0|374;4|130;8|172;12|2;16|3	1|0:4|0:1.0:0.5:1152:0:0|0:469.57|682.43:168.99:180:25:-11.91:-8.46:883:-22|1;-10|1;-7|1;-5|3;-4|1;-1|1;0|491;4|70;8|133;12|9;16|1;20|4:0|454;4|69;8|130;12|10;16|4
+22	16848278	STR_887762	ATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAAACATCGAATGGAATCGAAT	ATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAAT,ATCAAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAAACATCGAATGGACTCGAAT,ATCGAATGGAATCAAATGGAATCATCATCGAATGGAATCGAATGGAAACAACGAATGGACTCGAAT,ATCGAATGGAATCAAATGGAATCATCATCGAATGGAATCGAATGGAAACATCGAATGGAATCGAAT,ATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAAACATCGAATGGACTCGAAT	.	.	START=16848278;END=16848343;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16848493	STR_887763	ATCGAATGGAATCGAATGGAATCATCAACGAATGGAATCGAATGGAATC	ATCGAATGGAATCGAATGGAATC,ATCGAATGGAATTGAATGGAATC,GTCGAATGGAATCGAATGGAATC	.	.	START=16848493;END=16848541;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16849180	STR_887764	GAATGGAATGGAATGGAAT	.	.	.	START=16849180;END=16849198;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16849229	STR_887765	GAATGGAATGGAATGGAAT	GAATGGAATGGAAT	.	.	START=16849229;END=16849247;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16849376	STR_887766	GAATGGAATGGAATGGA	.	.	.	START=16849376;END=16849392;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16849476	STR_887767	GAATCGAATGGAATCATCATCGAATGGAATCGAATTGAATCATCGAATGGAATCGAAT	GAATCGAATGGAATCATCATCGAATGGAATCGAATTGAATCATTGAATGGAATCGAAT	.	.	START=16849476;END=16849533;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:54:0:0|0:28.22|25.78:57.54:0:6:-0.06:-0.14:34:0|18;3|1:0|17	0|0:0|0:1.0:1.0:70:0:0|0:35.00|35.00:13.56:0:10:0.0:0.0:-2147483648:-11|1;0|25:0|19
+22	16851734	STR_887768	ATGGAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGAAT	ATGGAATGGAATCGAATGGAATCATCAAATGGAATTGAATGGAAT,GTGGAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGAAT	.	.	START=16851734;END=16851778;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16852263	STR_887769	GAATGGAATGGAATGGAAT	AAATGGAATGGAATGGAAT	.	.	START=16852263;END=16852281;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16852588	STR_887770	GAATGGAATCGAATGGAATCATTGAATGGAATTGAATGGAAT	.	.	.	START=16852588;END=16852629;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:59:0:0|0:29.50|29.50:.:1:8:0.0:0.0:-2147483648:-56|1;-46|1;-1|1;0|27;3|1:-10|1;0|25
+22	16854540	STR_887771	TCGAATGGAATCGAATAGAATCATCGAATGAAATCGAATGGAATC	TCGAATGGAATCAAATAGAATCATCGAATGAAATCGAATGGAATC,TCGAATGGAATCGAATAGAATCATCAAATGAAATCGAATGGAATC	.	.	START=16854540;END=16854584;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|0:1.0:0.5:59:0:0|0:30.50|28.50:57.37:0:8:-0.05:-0.26:46:0|16;3|1:0|13	.
+22	16856407	STR_887772	GAATGGAATCGAATGGAATCATGGAATGGAATAGAATGGAAT	GAATGGAATCAAATGGAATCATGGAATGGAATAGAATGGAAT,GAATGGAATCGAATGGAATCATGGAATGGAATAAAATGGAAT,GAATGGAATCGAATGGAATCATGGAATGGAATTGAATGGAAT	.	.	START=16856407;END=16856448;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16858622	STR_887774	GAATGGAATCGAATGGAATCATAGAATGGAATTGAATGGAAT	GAATGGAATCGAATGGAATCATAGAATGGAATTTAATGGAAT	.	.	START=16858622;END=16858663;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16859128	STR_887775	GAATGGAATCGAATGGAATCATGGAGTGGAATCGAATGGAAT	.	.	.	START=16859128;END=16859169;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:45:0:0|0:23.00|22.00:.:0:6:0.0:0.0:-2147483648:-46|2;-25|1;0|20:0|20	0|0:0|0:1.0:1.0:47:0:0|0:23.50|23.50:.:0:4:0.0:0.0:-2147483648:-10|1;0|24:0|23
+22	16859490	STR_887776	GAATGGAATAGAATGGAATAATCGAATAGAATTGAATGGAAT	.	.	.	START=16859490;END=16859531;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:46:0:0|0:23.00|23.00:.:0:5:0.0:0.0:-2147483648:-6|1;0|26:0|22	0|0:0|0:1.0:1.0:43:0:0|0:21.50|21.50:.:0:4:0.0:0.0:-2147483648:-26|1;0|22:0|21
+22	16859558	STR_887777	AATCGAATGGAATCGACTGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT	AATCGAATGGAATCAACTGGAATCATAATCGAATGGAATCGAATGGAATTATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT,AATCGAATGGAATCAACTGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT,AATCGAATGGAATCAATTGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT,AATCGAATGGAATCGACTGGAATCATCATCGAATGGAATTGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT,AATCGAATGGAATCGACTGGAATCATCATTGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT	.	.	START=16859558;END=16859647;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:60:0:0|0:30.00|30.00:8.83:0:8:0.0:0.0:-2147483648:0|14:0|11
+22	16859807	STR_887778	GAATGGTATCGAATGGAATAAATCGAATGGAATTGAATGGAATCATCATGGAATGGAATCAAATGGAATCATGGAATGGAAT	GAATGGAATCGAATGGAAAAAATCGAATTGAATCAAATGGAACCATCATCTAATGGAATTAAATAGAATCATTGAATGGAAT,GAATGGTATCGAATGGAATAAATCAAATGGAATTGAATGGAATCATCATGGAATGGAATCAAATGGAATCATGGAATGGAAT,GAATGGTATCGAATGGAATAAATCGAATGGAATTGAATGGAATCATCATGGAATGGAATCAAATGGAATCATGGAATGGACT,GAATGGTATCGAATGGAATAAATTGAATGGAATTGAATGGAATCATCATGGAATGGAATCAAATGGAATCATGGAATGGAAT	.	.	START=16859807;END=16859888;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:57:0:0|0:45.64|11.36:62.17:0:3:-6.2:-1.95:48:-22|1;0|9:0|8	0|0:0|0:1.0:1.0:63:0:0|0:31.50|31.50:3.08:0:5:0.0:0.0:-2147483648:0|20:0|17
+22	16860043	STR_887779	GAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGAAT	GAATGGAATCGAATGGAATCATCAAATGGAATTGAATGGAAT	.	.	START=16860043;END=16860084;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:51:0:0|0:21.50|29.50:44.72:0:7:-0.59:-0.13:38:0|21:0|16	0|0:0|0:1.0:1.0:54:0:0|0:27.00|27.00:12.51:0:6:0.0:0.0:-2147483648:-26|1;-13|1;0|31;28|1:0|29
+22	16860190	STR_887780	GAATGGAATCGAATGGAATGATTGAATGGAATCGAATGAAATCATCGAATGGAATTGAATGGAAT	TGGAATTGAATGGAAT,GAATGGAATCGAATGGAATGATTGAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGAAT,GAATGGAATCGAATGGAATGATTGAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGACT	.	.	START=16860190;END=16860254;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|2:0|0:1.0:0.5:49:0:0|0:22.96|26.04:48.21:0:6:-0.14:0.0:33:-46|1;-39|1;0|17:0|17
+22	16860595	STR_887781	GAATGGAATCGAATGGAATAATGGAATGGAAT	GAATGGAATCGAATGGAATAATAGAATGGAAT	.	.	START=16860595;END=16860626;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16861636	STR_887783	ATCGAATGGAATCGAATGGAATCATCGAATGGACTCGAATGGAATC	ATCGAATGGAATTGAATGGAATCATCGAATGGACTCGAATGGAATC	.	.	START=16861636;END=16861681;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16861791	STR_887784	GAATCGAATGGAATCATCGAATGGACTCGAATGGAATCAACATCGAATGGAATCAAATGGAATC	GAATAGAATGGAATCATCGAATGGACTCGAATGGAATCAACATCGAATGGAATCAAATGGAATC	.	.	START=16861791;END=16861854;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16862008	STR_887785	GAATGGAATTGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATC	GAATGGAATTGAATGGAATCGAATGGAATAATCATCGAATGGAATCGAATGGAATC,GAATGGAATTGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAAGGGAATC	.	.	START=16862008;END=16862063;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|0:1.0:0.5:67:0:0|0:34.29|32.71:73.46:0:10:-0.05:0.0:56:-65|2;-29|2;-19|1;0|30:0|25	.
+22	16862083	STR_887786	GAATGGAATGGAATGGAAT	.	.	.	START=16862083;END=16862101;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:54:0:0|0:26.21|27.79:.:0:3:0.0:0.0:-2147483648:0|39:0|37	0|0:0|0:1.0:1.0:41:0:0|0:20.50|20.50:.:0:2:0.0:0.0:-2147483648:-16|1;0|26:0|25
+22	16862132	STR_887787	ATGGAATGGAGTGGAATGGAA	.	.	.	START=16862132;END=16862152;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:51:0:0|0:25.50|25.50:.:0:1:0.0:0.0:-2147483648:0|26:0|25	0|0:0|0:1.0:1.0:42:0:0|0:21.00|21.00:.:0:2:0.0:0.0:-2147483648:-6|1;0|37:0|34
+22	16862288	STR_887788	ATTGAATGGAATTGAATTGAAT	ACTGAATGGAATTGAATTGAAT	.	.	START=16862288;END=16862309;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:46:0:0|0:19.04|26.96:55.41:0:4:0.0:0.0:-2147483648:-55|1;-42|1;-29|1;0|26:0|26	0|0:0|0:1.0:1.0:52:0:0|0:26.00|26.00:12.0:0:3:0.0:0.0:-2147483648:-18|1;-4|1;-3|1;0|38:0|36
+22	16862340	STR_887789	ATCGAATGGAATCGAATAGAATCATCGAATGGACTCGAATGGAATC	GAATGGAATCGAATAGAATCATCGAATGGACTCGAATGGAATC,ATCGAATGGAATCGAATAGAATCATCGAATGGACTCAAATGGAATC	.	.	START=16862340;END=16862385;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16873716	STR_887790	TTTTTTTTTTTTTTTTT	TTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT	.	.	START=16873716;END=16873732;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-5:1.0:0.5:64:0:0|0:42.98|21.02:20.14:1:4:-2.68:-1.31:48:-5|14;-1|1;0|34:-5|12;-1|1;0|27	0|1:0|-5:1.0:0.5:58:0:0|0:33.68|24.32:15.38:1:2:-0.78:-0.12:42:-5|16;-3|1;0|23:-5|15;-3|1;0|18
+22	16873970	STR_887791	AGATAGATGATTGATGGATAAATTGATACATAGATATATAGATATATAGA	.	.	.	START=16873970;END=16874019;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16874431	STR_887792	TGATTGATAGATGATTGATCGATTGATTGGTTGACTGATTGAT	.	.	.	START=16874431;END=16874473;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:109:0:0|0:44.02|64.98:.:0:0:0.0:0.0:-2147483648:0|64:0|61	0|0:0|0:1.0:1.0:112:0:0|0:43.01|68.99:.:0:0:0.0:0.0:-2147483648:0|68:0|65
+22	16875531	STR_887793	AAAAAAAGAAAAAAAAAAAAAAA	AAAAAAAGAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAGAAAAAAAAAAAAAAAA,AAAAAAAGAAAAAAAAAAAAAAAAA	.	.	START=16875531;END=16875553;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:76:0:0|0:38.00|38.00:6.32:1:10:0.0:0.0:-2147483648:-12|1;-10|3;0|35;1|1:0|29	0|0:0|0:1.0:1.0:61:0:0|0:30.50|30.50:3.76:0:9:0.0:0.0:-2147483648:-12|1;-10|4;0|39;2|1;3|1:0|33
+22	16876010	STR_887794	AAAAAATAAAAATAAAAAAAA	AAAAAATAAAAATAAAAAAAAA,AAAAAATAAAAATAAAAACAAA	.	.	START=16876010;END=16876030;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|1:1.0:0.5:64:0:0|0:40.53|23.47:21.75:0:4:-1.86:-0.14:43:-24|1;-11|1;0|22;1|11;6|1:0|20;1|11	0|1:0|1:1.0:0.5:62:0:0|0:41.57|20.43:16.14:0:4:-2.9:-1.8:44:0|27;1|12:0|20;1|11
+22	16880390	STR_887795	AAAAAGCAAAAACAGAAAACAAAAACAA	AAAAAGCAAAAACAGAAAAAAAACAA,AAAAAGCAAAAACAGAAAAAAAAACAA	.	.	START=16880390;END=16880417;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|-1:1.0:0.5:71:0:0|0:56.50|14.50:6.96:0:4:-9.35:-1.34:50:-2|3;-1|4;0|39:-1|4;0|39	0|1:0|-2:1.0:0.5:72:0:0|0:61.50|10.50:17.66:0:3:-10.79:0.0:63:-2|5;-1|1;0|38;7|1:-2|5;0|38
+22	16881478	STR_887796	ACAACAACAACAACAA	ACAACAACAACAAAAA,ACAACAACAACAACAACAA	.	.	START=16881478;END=16881493;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|0:3|0:1.0:0.5:73:0:0|0:20.97|52.03:59.46:0:1:-3.78:-1.02:70:0|46;3|17:0|45;3|16	0|2:0|3:1.0:0.5:84:0:0|0:50.05|33.95:143.83:0:3:-1.14:0.0:70:0|33;3|26:0|32;3|23
+22	16882992	STR_887797	AAAAAAAAAAAAAA	AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA	.	.	START=16882992;END=16883005;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|-1:1.0:0.5:102:0:0|0:64.10|37.90:6.15:26:2:-2.38:-0.3:90:-27|1;-2|4;-1|44;0|27;1|1;2|1:-2|4;-1|43;0|24;1|1;2|1	0|2:0|-2:0.6:0.3:98:0:0|0:55.00|43.00:0.17:22:6:-1.09:-2.1:74:-3|4;-2|8;-1|13;0|33;1|2;2|2:-3|4;-2|8;-1|13;0|30;1|2;2|1
+22	16884002	STR_887799	CCCTAACCGTAAACTTAACCCCTAACCCCTAACCCTAACACCAACCTTAACCCTA	CCCTAACCCTAAACTTAACCCCTAACCCCTAACCCTAACACCAACCTTAACCCTA	.	.	START=16884002;END=16884056;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:126:0:0|0:77.05|48.95:92.39:0:8:-2.26:-0.26:110:-7|1;-1|1;0|49:0|48	0|1:0|0:1.0:0.5:128:0:0|0:70.25|57.75:114.39:0:10:-0.66:-1.66:112:0|54:0|51
+22	16886765	STR_887800	TGTGTCTGTTTGTGTGTGTGT	TGTGTCTGTTTGTGTGTGTGTGT	.	.	START=16886765;END=16886785;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|2:1.0:0.5:58:0:0|0:50.49|7.51:8.07:0:0:-9.62:-0.96:51:0|41;2|4:0|37;2|4	0|1:0|2:1.0:0.5:51:0:0|0:44.50|6.50:11.19:0:0:-7.86:-1.3:48:0|35;2|5:0|33;2|5
+22	16889548	STR_887801	AAAAAAAAAAAA	AAAAAAAAAAA,AAAAAAAAAAAAA	.	.	START=16889548;END=16889559;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|0:1|0:1.0:0.5:63:0:0|0:43.00|20.00:2.33:25:0:-2.29:-0.38:63:-1|3;0|25;1|16:-1|3;0|21;1|16	0|0:0|0:1.0:1.0:47:0:0|0:23.50|23.50:6.77:4:1:0.0:0.0:-2147483648:-1|5;0|29:-1|4;0|28
+22	16891978	STR_887802	AAAAAAAAAAAGAAAAGAAAAGAAAAAA	AAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAA	.	.	START=16891978;END=16892005;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16892581	STR_887803	AAAAAAAAAAACAAACAAAAAAA	AAAACAAAAAAACAAACAAAAAAA	.	.	START=16892581;END=16892603;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	1|0:1|0:1.0:0.5:63:0:0|0:15.45|47.55:52.84:1:9:-4.24:0.0:62:0|34;1|3:0|29;1|1
+22	16893474	STR_887804	AAACAAAACAAAACAAAA	.	.	.	START=16893474;END=16893491;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:54:0:0|0:27.00|27.00:.:0:0:0.0:0.0:-2147483648:0|31:0|31	0|0:0|0:1.0:1.0:53:0:0|0:28.50|24.50:.:3:1:0.0:0.0:-2147483648:-8|1;0|25;5|1:0|24
+22	16899609	STR_887805	AAAAAATAAAAAAAA	AAAAAATAAAAAA,AAAAAATAAAAAAAAA	.	.	START=16899609;END=16899623;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:51:0:0|0:25.50|25.50:5.5:3:3:0.0:0.0:-2147483648:-2|2;0|35:-2|2;-1|1;0|32	0|1:0|-2:1.0:0.5:56:0:0|0:45.02|10.98:6.12:0:6:-6.2:-0.35:48:-2|5;0|33:-2|5;0|32
+22	16904171	STR_887806	AAAAAAAAAAAAA	AAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA	.	.	START=16904171;END=16904183;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-4:1.0:0.5:52:0:0|0:41.61|10.39:9.22:0:2:-5.74:-1.08:46:-4|6;0|37:-4|5;0|31	0|1:0|-4:1.0:0.5:52:0:0|0:43.49|8.51:4.13:2:4:-8.03:-1.49:45:-4|3;-2|1;-1|1;0|37:-4|4;-2|1;-1|1;0|35
+22	16909237	STR_887807	TTTTTTTTTTCTTTTT	TTTTATTTTTCTTTTT,TTTTTTTTTTTCTTTTT	.	.	START=16909237;END=16909252;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|1:1.0:0.5:123:0:0|0:80.00|43.00:64.17:0:0:-3.24:-4.88:111:-13|2;-2|2;0|91:0|59;1|26	1|2:0|1:1.0:0.5:143:0:0|0:78.11|64.89:24.79:3:0:-0.52:-2.8:135:-13|2;-1|1;0|116:-1|1;0|59;1|44
+22	16911088	STR_887808	AAAAACAAAAACAAAAAC	AAAACAAAAACAAAAAC,AAAAACAAAAACAGAAAC	.	.	START=16911088;END=16911105;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-1:1.0:0.5:63:0:0|0:46.59|16.41:8.78:0:7:-3.51:-4.4:58:-1|7;0|33:-1|12;0|27	.
+22	16913537	STR_887809	AAAAAAAAAAAA	AAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA	.	.	START=16913537;END=16913548;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|1:1|-2:1.0:0.5:95:0:0|0:59.28|35.72:34.78:28:2:-1.63:-3.47:95:-3|11;-2|21;1|36;2|1;3|14;4|1;6|1:-3|11;-2|19;1|36;2|1;3|12;4|2	0|1:0|-2:1.0:0.5:72:0:0|0:47.50|24.50:47.54:8:3:-2.07:-0.49:71:-2|22;0|23;3|6;7|3:-2|20;0|22;3|8
+22	16913709	STR_887810	AAAATGAAAATAAAAATAAAAATAGAAAA	AAAATGAAAATAAAAATAGAAAA	.	.	START=16913709;END=16913737;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16913769	STR_887811	TTTATTTATTTATTTATTTATTT	TTTATTTATTTATTTATTTTTTT	.	.	START=16913769;END=16913791;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16916504	STR_887812	ATTTGCATTTCATTCATTTCATTTC	ATTTGCATTTCATTCATTTCATGTC	.	.	START=16916504;END=16916528;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16916943	STR_887813	TATATATACATATATA	TATATATATATACACA,TATATATATATACACACA	.	.	START=16916943;END=16916958;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16917858	STR_887814	AAAAAAAAAAAAAAAAAA	AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA	.	.	START=16917858;END=16917875;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16920146	STR_887815	AAAAAAAAAAA	AAAAAAAAAA,AAAAAAAAAAAA	.	.	START=16920146;END=16920156;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:55:0:0|0:15.03|39.97:3.74:1:6:0.0:0.0:-2147483648:-2|1;-1|1;0|41:-2|1;0|33	0|0:0|0:1.0:1.0:79:0:0|0:39.50|39.50:15.1:3:7:0.0:0.0:-2147483648:-2|2;-1|4;0|60:-2|2;-1|1;0|51
+22	16921805	STR_887816	CTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCT	.	.	START=16921805;END=16921818;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|4:1.0:0.5:98:0:0|0:57.05|40.95:29.51:22:6:-0.95:-4.76:90:0|46;2|6;4|14;6|17:0|40;2|5;4|14;6|17	0|2:0|4:1.0:0.5:85:0:0|0:56.07|28.93:13.91:9:11:-2.69:-2.22:78:0|43;2|9;4|20:0|34;2|9;4|20
+22	16922373	STR_887817	AAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA	.	.	START=16922373;END=16922387;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:65:0:0|0:32.50|32.50:14.63:0:7:0.0:0.0:-2147483648:-6|1;-5|1;0|56;8|2:0|49	0|3:0|3:1.0:0.5:47:0:0|0:25.36|21.64:26.46:0:4:-0.22:-0.33:32:-21|1;-5|1;0|21;3|12:0|18;3|13
+22	16923679	STR_887818	AAAAAAAAAAAA	AAAAAAAAAAA,AAAAAAAAAAAAA	.	.	START=16923679;END=16923690;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:0.94:0.94:57:0:0|0:14.72|42.28:1.16:5:3:0.0:0.0:-2147483648:-16|1;-15|1;-2|3;0|35:-2|3;0|31	0|1:0|-1:0.99:0.5:51:0:0|0:40.94|10.06:2.36:6:1:-4.62:0.0:50:-16|1;-15|2;-5|1;-2|2;-1|2;0|25:-2|1;-1|3;0|22
+22	16925998	STR_887819	TATCTATATCTATTATCTATATCTATATCTATATCTATAT	TATCTATATCTATTATCTATATCTATATCTATAT,TATCTATATCTATATCTATATCTATAGCTATATCTATAT,TATATATATCTATTATCTATATCTATATCTATATCTATAT	.	.	START=16925998;END=16926037;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|0:-1|0:1.0:0.5:110:0:0|0:45.97|64.03:58.64:4:16:-1.1:-0.27:94:-19|1;-5|1;-1|17;0|23:-1|17;0|23	0|2:0|-1:1.0:0.5:130:0:0|0:62.37|67.63:55.12:2:19:-0.16:-0.63:103:-8|3;-1|35;0|20:-1|35;0|21
+22	16926610	STR_887820	AAAAAAAAAAA	AAAAAAAAAAAAA,AAAAAAAAAAAAAA	.	.	START=16926610;END=16926620;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16936762	STR_887821	AACAACAACAACAACA	AACAACAACAACAAAC	.	.	START=16936762;END=16936777;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:62:0:0|0:50.38|11.62:55.01:0:3:-6.82:-0.86:57:-7|1;0|53:0|51	0|1:0|0:1.0:0.5:58:0:0|0:40.18|17.82:146.91:0:0:-2.27:-0.42:58:0|44:0|43
+22	16937186	STR_887822	TATATATATATAT	.	.	.	START=16937186;END=16937198;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16938056	STR_887823	TTTTTTTTTCTTTTTTT	.	.	.	START=16938056;END=16938072;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:98:0:0|0:49.00|49.00:.:1:3:0.0:0.0:-2147483648:0|72;1|1:0|65;1|1	0|0:0|0:1.0:1.0:114:0:0|0:55.59|58.41:.:0:1:0.0:0.0:-2147483648:-14|1;0|75:0|65
+22	16939832	STR_887824	GGGAAGTGAAGGGAAGGGGGAGGAGAGGGGAAGGGAAGGGAAGGAAAGAAGGGAAGAAGGGAAGGGAAGGGAA	GGTAAGGGAAGGGAAGGGGGAGGAGAGGGGAAGGGAAGGGAAGGGAAGAAGGGAAGGGGAGGGAATGGAA,GGGAAGGGAAGGGAAGGGGGAGGAGAGGGGAAGGGAAGGGAAGGAAAGAAGGGAAGAAGGGAAGGGAAGGGAA,GGGAAGGGAAGGGAAGGGGGAGGAGAGGGGAAGGGAAGGGAAGGGAAGAAGGGAAGAAGGGAAGGGAAGGGAA	.	.	START=16939832;END=16939904;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-3|0:1.0:0.5:94:0:0|0:14.94|79.06:62.7:0:14:-13.37:-1.46:84:-1|1;0|24:-3|1;0|18	.
+22	16944457	STR_887825	CTGCTGTGTGCTGCTGCTGCTG	.	.	.	START=16944457;END=16944478;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:48:0:0|0:24.00|24.00:.:1:1:0.0:0.0:-2147483648:0|32;3|1:0|31;3|1	0|0:0|0:1.0:1.0:46:0:0|0:23.00|23.00:.:3:5:0.0:0.0:-2147483648:0|24;3|2:0|23;3|2
+22	16945912	STR_887826	AAAAAAAAAAAA	AAAAAAAA	.	.	START=16945912;END=16945923;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16947897	STR_887827	AAAAAAAAAAA	AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA	.	.	START=16947897;END=16947907;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|7:1.0:0.5:85:0:0|0:58.46|26.54:10.12:7:3:-3.88:-0.56:68:0|50;6|6;7|11:0|43;6|6;7|11	0|3:0|7:1.0:0.5:82:0:0|0:53.52|28.48:7.95:10:3:-2.73:-1.04:61:0|43;1|1;6|6;7|8;8|4:0|38;1|1;6|6;7|8;8|3
+22	16950535	STR_887828	ACAAAAAAAAACAAAACAAACAAACAAACAAA	ACAAAAAAAACAAAACAAACAAACAAACAAT,ACAAAAAAACCAAAACAAACAAACAAACAAT,ACGAAAAAACCAAAACAAACAAACAAACAAA	.	.	START=16950535;END=16950566;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16954482	STR_887829	TTTGTTTGTTTTGTTTTGTTTT	TTTGTTTTTTTGTTTTGTTTTT,TTTGTTTTTTTTGTTTTGTTTTT,TTTGTTTGTTTGTCTTATTTTGTTTT	.	.	START=16954482;END=16954503;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|4:1.0:0.5:99:0:0|0:75.84|23.16:6.73:0:14:-8.74:-0.45:78:0|48;4|7:0|45;4|6	0|1:0|0:1.0:0.5:99:0:0|0:75.51|23.49:93.68:0:10:-8.49:0.0:86:0|43;4|6:0|43
+22	16956353	STR_887830	ATTCATTCATTTATTCATT	ATGCATTCATTTATTCATT,ATTAATTCATTTATTCATT	.	.	START=16956353;END=16956371;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16957300	STR_887831	ACACACACACACACACA	ACACAAACACACACACA,ACACACACACACACACACA	.	.	START=16957300;END=16957316;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:49:0:0|0:24.50|24.50:12.06:0:1:0.0:0.0:-2147483648:0|42:0|37	0|0:0|0:1.0:1.0:63:0:0|0:31.50|31.50:9.63:1:6:0.0:0.0:-2147483648:-16|1;0|37:0|34
+22	16961712	STR_887832	AAAAAAAAAAAATTAAAAAAAAAAAAAAGAAAA	AAAAAAAAAAAATTAAAAAAAAAAAAAGAAAA,AAAAAAAAAAATTAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAATTAAAAAAAAAAAAAGAAAA,AAAAAAAAAAATTAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAATTAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAATTAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAAATTAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAATTAAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAATTAAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAATTAAAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAATTAAAAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAGAAAA	.	.	START=16961712;END=16961744;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	6|6:1|1:0.78:0.78:23:0:0|0:13.98|9.02:0.99:2:0:0.0:0.0:-2147483648:1|9;2|1:1|9;2|1	0|11:0|3:1.0:0.5:21:0:0|0:12.49|8.51:5.66:2:3:-0.37:-0.66:14:0|8;2|1;3|2;5|1:0|4;2|1;3|2
+22	16964778	STR_887833	AACAACAATAACAACAACAACA	.	.	.	START=16964778;END=16964799;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:130:0:0|0:68.00|62.00:.:0:0:0.0:0.0:-2147483648:0|91:0|89	0|0:0|0:1.0:1.0:129:0:0|0:67.05|61.95:.:0:1:0.0:0.0:-2147483648:0|93:0|87
+22	16965931	STR_887834	TGTGTGTGTGTGTGTGT	TGTGTGTGTGTGTGTGTGT,TGTGTGTGTGTGTGTGTGTGTGT,TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	START=16965931;END=16965947;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|12:1.0:0.5:52:0:0|0:44.01|7.99:9.68:2:2:-7.77:0.0:44:0|42;16|2:0|37;16|2	0|0:0|0:1.0:1.0:42:0:0|0:21.00|21.00:8.22:1:1:0.0:0.0:-2147483648:0|35:0|31
+22	16966999	STR_887835	TTATTTGTTTATTTATTTATTTATTT	TTATTTGTTTATTTATTTATTT	.	.	START=16966999;END=16967024;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|0:-4|0:1.0:0.5:51:0:0|0:12.50|38.50:4.23:0:0:-4.16:-1.35:42:-4|6;0|25:-4|6;0|24	0|0:0|0:1.0:1.0:62:0:0|0:31.00|31.00:3.58:10:5:0.0:0.0:-2147483648:-4|7;0|27:-4|7;0|27
+22	16969703	STR_887836	AAAAAGAAAAAAAAA	CAAAAGAAAAAAAA,CAAAAGAAAAAAAAA	.	.	START=16969703;END=16969717;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-1:1.0:0.5:83:0:0|0:48.61|34.39:34.78:0:0:-0.87:-2.03:76:-1|22;0|40:-1|22;0|32	0|1:0|-1:1.0:0.5:87:0:0|0:45.33|41.67:50.97:0:0:-0.13:-1.9:84:-1|33;0|39:-1|31;0|37
+22	16970459	STR_887837	ACACACCCACACACACACCCACA	ACACACCCACACCCACACCCACA,ACACACCCACACCCACATCCACA	.	.	START=16970459;END=16970481;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:70:0:0|0:41.00|29.00:87.19:0:0:-0.81:-1.43:60:0|54:0|54	0|1:0|0:1.0:0.5:71:0:0|0:45.48|25.52:15.36:0:1:-1.92:-0.11:58:0|47:0|44
+22	16971240	STR_887838	TAAAATAAAATAAAAAAAAATTAAAAAAAATAA	TAAAATAAAATTAAAAAAAATTAAAAAAAATAA,TAAAATAAAATAAAAAAAAAATTAAAAAAAATAA	.	.	START=16971240;END=16971272;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:74:0:0|0:37.00|37.00:14.82:0:2:0.0:0.0:-2147483648:0|36:0|36	0|0:0|0:1.0:1.0:64:0:0|0:32.00|32.00:13.57:3:1:0.0:0.0:-2147483648:-12|1;0|33:0|33
+22	16981571	STR_887839	AAAAAAAAAAAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	.	.	START=16981571;END=16981596;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|8:0|-1:1.0:0.5:43:0:0|0:21.93|21.07:6.75:0:2:0.0:-0.23:21:-10|1;-1|8;0|11:-1|9;0|7
+22	16982328	STR_887840	TTTTATTTTATTTTATT	.	.	.	START=16982328;END=16982344;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:63:0:0|0:45.00|18.00:71.93:0:0:-3.05:-5.17:63:0|43:0|43	0|0:0|0:1.0:0.5:68:0:0|0:43.89|24.11:45.07:0:2:-1.57:-6.06:67:0|48:0|46
+22	16984432	STR_887841	TTTTTTTTTCTTTTTT	TTTTTTTTTTCTTTTTT	.	.	START=16984432;END=16984447;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:107:0:0|0:30.28|76.72:126.68:19:0:-5.2:-0.18:107:0|65;1|19:0|65;1|19	0|0:0|0:1.0:0.5:91:0:0|0:37.00|54.00:105.45:11:2:-1.05:0.0:89:-15|1;0|56;1|8;2|1:0|51;1|8
+22	16985806	STR_887842	AAAAAAAAAAAAA	AAAAAAAAAAAAAA	.	.	START=16985806;END=16985818;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:49:0:0|0:24.50|24.50:11.57:2:1:0.0:0.0:-2147483648:-1|2;0|40:-1|2;0|37	0|0:0|0:1.0:1.0:45:0:0|0:22.50|22.50:9.9:3:1:0.0:0.0:-2147483648:-1|3;0|34:-1|2;0|31
+22	16986789	STR_887843	TTTATTTATTTATTT	.	.	.	START=16986789;END=16986803;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:59:0:0|0:29.50|29.50:.:0:1:0.0:0.0:-2147483648:0|40:0|38	0|0:0|0:1.0:1.0:48:0:0|0:32.00|16.00:.:0:0:0.0:0.0:-2147483648:0|32:0|32
+22	16987382	STR_887844	CTTTCCTTCTTTCTTTCTT	.	.	.	START=16987382;END=16987400;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:45:0:0|0:22.50|22.50:.:0:3:0.0:0.0:-2147483648:0|28:0|27
+22	16987413	STR_887845	CCCCTCCCCTCTCCTCCATTCCTCTCCCCTCCCCTC	CCCCTCCCCTCTCCTCCATTTCTTTCCCCTCCCCTC	.	.	START=16987413;END=16987448;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:25:0:0|0:12.50|12.50:5.12:0:1:0.0:0.0:-2147483648:0|13:0|13
+22	16987645	STR_887846	TTTTTTTTTTTTTTTTTTTTTTT	TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT	.	.	START=16987645;END=16987667;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|3:-1|-1:0.92:0.92:47:0:0|0:23.50|23.50:1.04:3:0:0.0:0.0:-2147483648:-2|1;-1|21;0|4:-2|1;-1|23	.
+22	16989583	STR_887848	TTTTTTTTTTTTT	TTTTTTTCTTT,TTTTTTTTTTTT	.	.	START=16989583;END=16989595;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16990569	STR_887849	TTTATTATTTATTTATTT	TTTTTTATTTATTTATTT	.	.	START=16990569;END=16990586;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:71:0:0|0:32.00|39.00:54.44:2:0:0.0:0.0:-2147483648:0|35:0|33	0|0:0|0:1.0:1.0:83:0:0|0:36.95|46.05:65.15:0:0:0.0:0.0:-2147483648:0|43:0|40
+22	16991060	STR_887850	CTGGCTGGCTGGCTG	.	.	.	START=16991060;END=16991074;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:82:0:0|0:41.00|41.00:21.96:0:0:0.0:0.0:-2147483648:0|62:0|58	0|0:0|0:1.0:1.0:86:0:0|0:43.00|43.00:23.15:0:0:0.0:0.0:-2147483648:0|64:0|60
+22	16992082	STR_887851	TTTTTTTTTTTTTT	TTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTCTTTTTTTTTTTT,TTTCTTTTTTTTTTTTT	.	.	START=16992082;END=16992095;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|2:1.0:0.5:76:0:0|0:31.00|45.00:20.03:12:1:-0.87:-0.78:76:0|22;1|1;2|29;3|12:0|17;2|24;3|12	0|3:0|2:1.0:0.5:105:0:0|0:53.97|51.03:6.65:23:4:-0.07:-0.26:105:-7|1;-2|2;0|26;1|15;2|36;3|7:0|19;1|14;2|31;3|7
+22	16992600	STR_887852	TTTTTTTTTTTTTTTTTTTTTTTT	TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	.	.	START=16992600;END=16992623;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16994014	STR_887853	AAAAAAAAAAAAA	AAAAAAAAAAA	.	.	START=16994014;END=16994026;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	16995509	STR_887854	AAAAAAAAAAAAAA	AAAAAAAAAAAAAAA,AAAAAAAAAAAAACA,AAAAAGAAAAAAAAA,AAAAAAAAAAAAAACA,AAAAAGAAAAAAAAAA,AAAAAAAAAAAAAAACA,AAAAAAAAAAAAAAAACA	.	.	START=16995509;END=16995522;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|1:1|1:1.0:0.5:49:0:0|0:13.53|35.47:25.53:1:1:-2.78:-2.05:46:0|3;1|37;2|1:1|34;2|1	0|3:0|1:0.84:0.42:40:0:0|0:31.46|8.54:0.72:17:2:-3.72:-1.55:37:0|13;1|16;2|4:0|13;1|14;2|3
+22	17000929	STR_887855	AAAAAAAAAAAAAAAA	AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAGA,AAAAAAAAAAAAAAAAGA,AAAAAAAAAAAAAAAAAGA	.	.	START=17000929;END=17000944;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|2:1.0:0.5:74:0:0|0:46.49|27.51:12.87:1:1:-1.74:-4.72:59:0|36;2|12;3|1;13|1:0|34;2|12;3|1	0|3:0|2:1.0:0.5:65:0:0|0:42.51|22.49:9.9:2:2:-1.95:-2.92:63:0|31;1|2;2|15:0|25;1|2;2|15
+22	17001798	STR_887856	GTGTGTGTGGGTGTGTG	GTGTGTGTGGGTGTGTGGGTGTGTG	.	.	START=17001798;END=17001814;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:87:0:0|0:36.10|50.90:127.44:0:2:0.0:0.0:-2147483648:-11|1;0|65:0|61	0|0:0|0:1.0:1.0:80:0:0|0:34.00|46.00:125.44:0:3:0.0:0.0:-2147483648:0|62:0|53
+22	17002979	STR_887857	TAAATAATTAAATAAATACATAAAT	CAAATAAGAAAATAAATACATAAAT	.	.	START=17002979;END=17003003;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:102:0:0|0:56.00|46.00:422.15:0:0:-0.43:-0.37:102:-21|1;0|59:0|56	0|1:0|0:1.0:0.5:88:0:0|0:42.00|46.00:402.93:0:0:-0.13:-0.28:88:-21|3;0|55:0|54
+22	17003249	STR_887858	TTTTCTTTTTTTTCTTTTTTTTTTT	TTTTCTCATTTTTCTTTTTTTTT,TTTTCTTTTTTTTCTTTTTTTTTT,TTTTCTTTTTTTTCTTTTTTTTTTTT	.	.	START=17003249;END=17003273;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|1:1|-2:1.0:0.5:112:0:0|0:53.02|58.98:40.67:1:3:-0.2:-0.24:110:-15|1;-14|1;-2|47;1|29;3|1:-2|42;1|28	0|1:0|-2:1.0:0.5:127:0:0|0:50.00|77.00:38.37:2:5:-1.71:-0.44:125:-34|1;-2|52;-1|1;0|31;4|1:-2|48;-1|1;0|25
+22	17005574	STR_887860	TTTTTTTTTTTTTTTTTTT	TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT	.	.	START=17005574;END=17005592;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|11:-8|5:1.0:0.5:65:0:0|0:29.57|35.43:13.99:1:6:-0.34:-0.43:46:-9|2;-8|6;-7|1;-5|1;0|1;5|16:-8|5;5|13	1|11:-8|5:0.81:0.41:57:0:0|0:25.17|31.83:0.64:20:8:-0.46:-0.47:41:-15|1;-9|4;-8|4;-7|2;2|8;5|1;6|11;8|2:-8|1;-7|2;2|7;6|8
+22	17006959	STR_887861	GTGGTTGGTGGTGGTGGTG	GTGGTTGGTGGTGGCAGTG	.	.	START=17006959;END=17006977;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:55:0:0|0:38.97|16.03:76.35:0:2:-2.85:-1.99:49:0|38:0|38	0|1:0|0:1.0:0.5:64:0:0|0:48.00|16.00:88.94:0:1:-4.24:-1.15:62:0|49:0|48
+22	17008626	STR_887863	CCTGGCCCTGGCCCTAGCCCTGGTCCTG	.	.	.	START=17008626;END=17008653;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:62:0:0|0:31.00|31.00:.:0:8:0.0:0.0:-2147483648:0|37;1|1:0|35	.
+22	17008991	STR_887864	CCTGGCCCTGACCCTGGCCCTGG	CCTGGCCCTGACCCTAGCCCTGG	.	.	START=17008991;END=17009013;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:46:0:0|0:23.00|23.00:10.18:0:5:0.0:0.0:-2147483648:-24|1;0|22:0|22	0|0:0|0:1.0:1.0:44:0:0|0:22.00|22.00:10.13:0:4:0.0:0.0:-2147483648:0|33:0|30
+22	17009341	STR_887865	TGCCCTGCCCTGCCCTGCCCTG	TGCCCTGCCCTGCCCTGCCCTGCCCTG	.	.	START=17009341;END=17009362;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	17009794	STR_887866	CCTGGTCCTGCCCAGGCCCTGGCCCTGGCCCTGCCCTGGCTGTTCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGGCCTGCCTTGGCCCT	CCTGGTCCTGCCCAGGCCCTGGCCCTGGCCCTGCCCTGGCTGTTCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGTCCTGCCTTGCCCT,CCTGGTCCTGCCCAGGCCCTGGCCCTGGCCCTGCCCTGGCTGTTCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGTCCTGCCTTGGCCCT	.	.	START=17009794;END=17009891;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	17010324	STR_887867	CCCTGCCCTGGCCCTGCCCTCCCTTTGGCCCTGCCCTG	CCCTGCCCTTGCCCTGCCCTCCCTTTGGCCCTGCCCTG	.	.	START=17010324;END=17010361;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:61:0:0|0:20.90|40.10:6.93:0:8:0.0:0.0:-2147483648:-23|1;-10|1;-4|1;0|32:0|28	0|0:0|0:1.0:1.0:50:0:0|0:17.47|32.53:7.38:0:6:0.0:0.0:-2147483648:0|31;8|1:0|28
+22	17010846	STR_887869	CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCC	CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCC,CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCC,CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCC,CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCC	.	.	START=17010846;END=17010889;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:37:0:0|0:18.50|18.50:4.93:0:4:0.0:0.0:-2147483648:-1|1;0|18;9|1:0|16	.
+22	17010945	STR_887870	CCTGGTCCTGGCCCTGGCCCTG	CCTGGTCCTGGCCCTGGCTCTG	.	.	START=17010945;END=17010966;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|0:0|0:1.0:0.5:33:0:0|0:4.50|28.50:3.0:0:2:-6.09:0.0:26:0|21:0|20	1|0:0|0:1.0:0.5:47:0:0|0:11.34|35.66:31.36:0:4:-4.38:-0.18:37:0|32:0|29
+22	17011373	STR_887871	GCCCTGGCCCTGGCCCTG	GCCCTGGCCCCGGCCCTGGCCCTG	.	.	START=17011373;END=17011390;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	17012405	STR_887872	GCCCTGGCCCTGGCCTGAGCATTGGCCCTGGCCCTG	GCCCTGTCCCTGGCCTGAGCATTGGCCCTGGCCCTG,GCCCTGTCCCTGGCCTGAGCATTGGTCCTGGCCCTG	.	.	START=17012405;END=17012440;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:74:0:0|0:45.22|28.78:73.59:0:4:-1.02:-1.51:71:0|47:0|47	0|1:0|0:1.0:0.5:63:0:0|0:32.50|30.50:59.62:0:3:-0.05:-2.17:54:0|33:0|30
+22	17013165	STR_887873	TGCCCTGCCCTGGCCTTGCCCTTCCCTGGCCTTGCCCTGCCCTG	TGCCCTGCCCTGGCCTTGCCCTTCCCTGGCCTTGCCCTGCCCTGG	.	.	START=17013165;END=17013208;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	17013288	STR_887874	CCCTGGCCCTGCCCTTGCTCTGGCCCTGTCCCTGGCTCAGCCTTGACCCTGGCCCTGGCCCTG	CCCTGGCCCTGCCCTTGCTCTGGCCCTGTAGCTGGCTCAGCCTTGACCCTGACCCTGGCCCTG,CCCTGGCCCTGCCCTTGCTCTGGCCCTGTCGCTGGCTCAGCCTTGACCCTGACCCTGGCCCTG	.	.	START=17013288;END=17013350;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	17013478	STR_887875	GCCCTGCCCTACCCTGGCCTTGCCCTGCCCTGGCCCTGCCTTTGGCCTGCCCTG	GCCCTGCCCTACCCTGGCATTGCCCTGCCCTGGCCCTGCCTTTGGCCTGCCCTG,GCCCTGCCCTACCCTGGCGTTGCCCTGCCCTGGCCCTGCCTTTGGCCTGCCCTG	.	.	START=17013478;END=17013531;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
+22	17013794	STR_887876	CTGGCCCTGATCCTGCCATGGCCCTGGCCCTGCCATGTCCCTGCCCTGGCCCTGG	CTGGCCCTGATACTGCCATGGCCCTGGCCCGGCCATGTCCCTGCCCTGGCCCTGG,CTGGCCCTGATACTGCCATGGCCCTGGCCCTGCCATGTCCCTGCCCTGGCCCTGG,CTGGCCCTGATCCTGCCATGGCCCTCGCCCTGCCATGTCCCTGCCCTGGCCCTGG	.	.	START=17013794;END=17013848;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|0:1.0:0.5:69:0:0|0:45.52|23.48:45.32:0:10:-2.09:0.0:64:-57|1;-26|1;-18|1;-11|2;0|28;9|1:0|27	0|2:0|0:1.0:0.5:73:0:0|0:42.50|30.50:50.41:0:5:-0.77:-0.37:64:-12|1;0|35;7|1:0|33
+22	17018608	STR_887878	TTTTTTTTATTTTTT	TTTTTTTTTATTTTTT	.	.	START=17018608;END=17018622;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:49:0:0|0:24.50|24.50:11.32:1:2:0.0:0.0:-2147483648:0|35:0|32	0|0:0|0:1.0:1.0:38:0:0|0:19.00|19.00:7.11:2:2:0.0:0.0:-2147483648:-1|2;0|22:0|20
diff --git a/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrdercurrent b/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrdercurrent
new file mode 120000
index 00000000..5965a1b7
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrdercurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_advntr_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_advntr_output0/test.vcf
new file mode 100644
index 00000000..dfad43b7
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_advntr_output0/test.vcf
@@ -0,0 +1,15 @@
+##fileformat=VCFv4.1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##source=adVNTR ver. 1.3.3
+##contig=<ID=chr21,length=48129895>
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
+##INFO=<ID=VID,Number=1,Type=Integer,Description="VNTR ID">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
+##INFO=<ID=RC,Number=1,Type=Integer,Description="Reference repeat unit count">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read depth">
+##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Spanning read count">
+##FORMAT=<ID=FR,Number=1,Type=Integer,Description="Flanking read count">
+##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	CSTB_2_5_testdata.bam	CSTB_3_5_testdata.bam
+chr21	45196323	.	GCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGG	GCGCGGGGCGGGGCGCGGGGCGGG,GCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGG	.	.	END=45196359;VID=301645;RU=GCGCGGGGCGGG;RC=3	GT:DP:SR:FR:ML	1/2:60:39:21:1.0	0/0:58:37:21:1.0
diff --git a/trtools/mergeSTR/tests/mydir/test_advntr_outputcurrent b/trtools/mergeSTR/tests/mydir/test_advntr_outputcurrent
new file mode 120000
index 00000000..34916365
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_advntr_outputcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_advntr_output0
\ No newline at end of file
diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged.vcf b/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0/test.vcf
similarity index 96%
rename from trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged.vcf
rename to trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0/test.vcf
index d0db38c7..e7228875 100644
--- a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged.vcf
+++ b/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0/test.vcf
@@ -1,7 +1,7 @@
 ##fileformat=VCFv4.1
 ##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
 ##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
-##command=/Users/yang/Desktop/TRTools/trtools/mergeSTR/mergeSTR.py --vcfs trtools/testsupport/sample_vcfs/mergeSTR_vcfs/test_file_hipstr1.vcf.gz,trtools/testsupport/sample_vcfs/mergeSTR_vcfs/test_file_hipstr2.vcf.gz --vcftype hipstr --out trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
 ##contig=<ID=1,length=249250621>
 ##contig=<ID=2,length=243199373>
 ##contig=<ID=3,length=198022430>
diff --git a/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffecurrent b/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffecurrent
new file mode 120000
index 00000000..085dcced
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffecurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_duplicate_ids0/test.vcf b/trtools/mergeSTR/tests/mydir/test_duplicate_ids0/test.vcf
new file mode 100644
index 00000000..b4cfe0d4
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_duplicate_ids0/test.vcf
@@ -0,0 +1,43 @@
+##fileformat=VCFv4.1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr10,length=130694993>
+##contig=<ID=chr11,length=122082543>
+##contig=<ID=chr12,length=120129022>
+##contig=<ID=chr13,length=120421639>
+##contig=<ID=chr14,length=124902244>
+##contig=<ID=chr15,length=104043685>
+##contig=<ID=chr16,length=98207768>
+##contig=<ID=chr17,length=94987271>
+##contig=<ID=chr18,length=90702639>
+##contig=<ID=chr19,length=61431566>
+##contig=<ID=chr1,length=195471971>
+##contig=<ID=chr2,length=182113224>
+##contig=<ID=chr3,length=160039680>
+##contig=<ID=chr4,length=156508116>
+##contig=<ID=chr5,length=151834684>
+##contig=<ID=chr6,length=149736546>
+##contig=<ID=chr7,length=145441459>
+##contig=<ID=chr8,length=129401213>
+##contig=<ID=chr9,length=124595110>
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
+##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
+##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
+##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
+##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
+##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
+##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
+##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
+##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
+##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
+##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
+##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
diff --git a/trtools/mergeSTR/tests/mydir/test_duplicate_idscurrent b/trtools/mergeSTR/tests/mydir/test_duplicate_idscurrent
new file mode 120000
index 00000000..55ebd489
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_duplicate_idscurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_duplicate_ids0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0/test.vcf b/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0/test.vcf
new file mode 100644
index 00000000..0fb7220b
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0/test.vcf
@@ -0,0 +1,22 @@
+##fileformat=VCFv4.1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chrX,length=156508116>
+##ALT=<ID=STR18,Description="Allele comprised of 18 repeat units">
+##ALT=<ID=STR16,Description="Allele comprised of 16 repeat units">
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant">
+##INFO=<ID=REF,Number=1,Type=Integer,Description="Reference copy number">
+##INFO=<ID=REPID,Number=1,Type=String,Description="Repeat identifier as specified in the variant catalog">
+##INFO=<ID=RL,Number=1,Type=Integer,Description="Reference length in bp">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat unit in the reference orientation">
+##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
+##INFO=<ID=VARID,Number=1,Type=String,Description="Variant identifier as specified in the variant catalog">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=ADFL,Number=1,Type=String,Description="Number of flanking reads consistent with the allele">
+##FORMAT=<ID=ADIR,Number=1,Type=String,Description="Number of in-repeat reads consistent with the allele">
+##FORMAT=<ID=ADSP,Number=1,Type=String,Description="Number of spanning reads consistent with the allele">
+##FORMAT=<ID=LC,Number=1,Type=Float,Description="Locus coverage">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence interval for REPCN">
+##FORMAT=<ID=REPCN,Number=1,Type=String,Description="Number of repeat units spanned by the allele">
+##FORMAT=<ID=SO,Number=1,Type=String,Description="Type of reads that support the allele; can be SPANNING, FLANKING, or INREPEAT meaning that the reads span, flank, or are fully contained in the repeat">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	N27483924	NSDFSDFSDF	NA12878_S1_HTT
+chrX	3076603	.	C	<STR16>	.	.	END=3076660;REF=19;REPID=HTT;RL=57;RU=CAG;VARID=HTT	GT:ADFL:ADIR:ADSP:LC:REPCI:REPCN:SO	0:319:0:4:34.624012:19-19:19:SPANNING	0/0:319/319:0/0:4/4:34.624012:19-19/19-19:19/19:SPANNING/SPANNING	1:319:0:4:34.624012:16-16:16:SPANNING
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_altcurrent b/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_altcurrent
new file mode 120000
index 00000000..4c430896
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_altcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_no_alt0/test.vcf b/trtools/mergeSTR/tests/mydir/test_eh_no_alt0/test.vcf
new file mode 100644
index 00000000..93e52e73
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_eh_no_alt0/test.vcf
@@ -0,0 +1,22 @@
+##fileformat=VCFv4.1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr4,length=156508116>
+##ALT=<ID=STR18,Description="Allele comprised of 18 repeat units">
+##ALT=<ID=STR16,Description="Allele comprised of 16 repeat units">
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant">
+##INFO=<ID=REF,Number=1,Type=Integer,Description="Reference copy number">
+##INFO=<ID=REPID,Number=1,Type=String,Description="Repeat identifier as specified in the variant catalog">
+##INFO=<ID=RL,Number=1,Type=Integer,Description="Reference length in bp">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat unit in the reference orientation">
+##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
+##INFO=<ID=VARID,Number=1,Type=String,Description="Variant identifier as specified in the variant catalog">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=ADFL,Number=1,Type=String,Description="Number of flanking reads consistent with the allele">
+##FORMAT=<ID=ADIR,Number=1,Type=String,Description="Number of in-repeat reads consistent with the allele">
+##FORMAT=<ID=ADSP,Number=1,Type=String,Description="Number of spanning reads consistent with the allele">
+##FORMAT=<ID=LC,Number=1,Type=Float,Description="Locus coverage">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence interval for REPCN">
+##FORMAT=<ID=REPCN,Number=1,Type=String,Description="Number of repeat units spanned by the allele">
+##FORMAT=<ID=SO,Number=1,Type=String,Description="Type of reads that support the allele; can be SPANNING, FLANKING, or INREPEAT meaning that the reads span, flank, or are fully contained in the repeat">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA12878_S1_HTT	N27483924
+chr4	3076603	.	C	<STR16>,<STR18>	.	.	END=3076660;REF=19;REPID=HTT;RL=57;RU=CAG;VARID=HTT	GT:ADFL:ADIR:ADSP:LC:REPCI:REPCN:SO	1/2:319/320:0/0:4/7:34.624012:16-16/18-18:16/18:SPANNING/SPANNING	0/0:319/320:0/0:4/7:34.624012:19-19/19-19:19/19:SPANNING/SPANNING
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_no_altcurrent b/trtools/mergeSTR/tests/mydir/test_eh_no_altcurrent
new file mode 120000
index 00000000..7cb532b2
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_eh_no_altcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_eh_no_alt0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_eh_output0/test.vcf
new file mode 100644
index 00000000..a374ca72
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_eh_output0/test.vcf
@@ -0,0 +1,22 @@
+##fileformat=VCFv4.1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr4,length=156508116>
+##ALT=<ID=STR18,Description="Allele comprised of 18 repeat units">
+##ALT=<ID=STR16,Description="Allele comprised of 16 repeat units">
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant">
+##INFO=<ID=REF,Number=1,Type=Integer,Description="Reference copy number">
+##INFO=<ID=REPID,Number=1,Type=String,Description="Repeat identifier as specified in the variant catalog">
+##INFO=<ID=RL,Number=1,Type=Integer,Description="Reference length in bp">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat unit in the reference orientation">
+##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
+##INFO=<ID=VARID,Number=1,Type=String,Description="Variant identifier as specified in the variant catalog">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=ADFL,Number=1,Type=String,Description="Number of flanking reads consistent with the allele">
+##FORMAT=<ID=ADIR,Number=1,Type=String,Description="Number of in-repeat reads consistent with the allele">
+##FORMAT=<ID=ADSP,Number=1,Type=String,Description="Number of spanning reads consistent with the allele">
+##FORMAT=<ID=LC,Number=1,Type=Float,Description="Locus coverage">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence interval for REPCN">
+##FORMAT=<ID=REPCN,Number=1,Type=String,Description="Number of repeat units spanned by the allele">
+##FORMAT=<ID=SO,Number=1,Type=String,Description="Type of reads that support the allele; can be SPANNING, FLANKING, or INREPEAT meaning that the reads span, flank, or are fully contained in the repeat">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA12878_S1_HTT	NA12822_S1_HTT
+chr4	3076603	.	C	<STR15>,<STR16>,<STR18>	.	.	END=3076660;REF=19;REPID=HTT;RL=57;RU=CAG;VARID=HTT	GT:ADFL:ADIR:ADSP:LC:REPCI:REPCN:SO	2/3:319/320:0/0:4/7:34.624012:16-16/18-18:16/18:SPANNING/SPANNING	1/1:310/322:0/0:3/6:33.46102:15-15/19-19:15/19:SPANNING/SPANNING
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_outputcurrent b/trtools/mergeSTR/tests/mydir/test_eh_outputcurrent
new file mode 120000
index 00000000..2e7c9b8b
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_eh_outputcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_eh_output0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_gangstr_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_gangstr_output0/test.vcf
new file mode 100644
index 00000000..b1d1cc54
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_gangstr_output0/test.vcf
@@ -0,0 +1,2727 @@
+##fileformat=VCFv4.1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
+##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0358_BXD40_TyJ_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0358_BXD40_TyJ/res_chr1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=chr10,length=130694993>
+##contig=<ID=chr11,length=122082543>
+##contig=<ID=chr12,length=120129022>
+##contig=<ID=chr13,length=120421639>
+##contig=<ID=chr14,length=124902244>
+##contig=<ID=chr15,length=104043685>
+##contig=<ID=chr16,length=98207768>
+##contig=<ID=chr17,length=94987271>
+##contig=<ID=chr18,length=90702639>
+##contig=<ID=chr19,length=61431566>
+##contig=<ID=chr1,length=195471971>
+##contig=<ID=chr2,length=182113224>
+##contig=<ID=chr3,length=160039680>
+##contig=<ID=chr4,length=156508116>
+##contig=<ID=chr5,length=151834684>
+##contig=<ID=chr6,length=149736546>
+##contig=<ID=chr7,length=145441459>
+##contig=<ID=chr8,length=129401213>
+##contig=<ID=chr9,length=124595110>
+##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
+##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
+##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
+##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
+##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
+##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
+##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
+##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
+##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
+##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
+##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
+##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
+##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
+##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
+##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	BXD196_0366	BXD40_TyJ_0358
+chr1	3004986	.	TCTGTCTGTCTG	.	.	.	END=3004997;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999912:3,3:3-3,3-3:17,12,0,2:3,17:2,2:193.56:366.612,131.36:0.0,0.0:0.0,5.1188e-05,0.999949	0/0:10:0.888534:3,3:3-3,3-3:6,4,0,0:3,6:NULL:61.3218:326.675,113.385:0.0,0.0:4.48253e-20,0.0502949,0.949783
+chr1	3005549	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3005568;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:181.959:366.612,131.36:0.0,0.0:0.0,8.11654e-06,0.999994	0/0:15:0.997039:4,4:4-4,4-4:12,3,0,0:4,12:NULL:73.0332:326.675,113.385:0.0,0.0:1.26878e-38,0.00169958,0.998307
+chr1	3009351	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3009402;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.597778:24,24:22-24,22-24:7,10,0,10:23,2|24,5:5,1|6,2|7,1|8,3|9,1|11,1|12,1:204.961:366.612,131.36:0.647588,0.647588:0.977848,0.0221963,7.63327e-09	0/0:26:0.389735:26,26:24-27,24-27:4,9,0,10:26,4:4,1|5,2|6,1|9,1|12,1|16,1|19,1|22,2:180.81:326.675,113.385:1.00776,1.00776:5.15603e-05,0.319906,0.680058
+chr1	3011925	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATA,TATATATATATATATATATATATATA	.	.	END=3011970;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:24:0.941159:13,13:11-13,11-13:9,12,0,0:13,9:NULL:154.4:366.612,131.36:0.623055,0.623055:1.0,0.0,0.0	1/1:4:0.00116485:4,4:2-7,2-7:0,4,0,0:NULL:NULL:36.0216:326.675,113.385:2.01694,2.01694:0.320181,0.553256,0.12662
+chr1	3013640	.	TTTGTTTGTTTGTTTG	.	.	.	END=3013655;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999747:4,4:3-4,3-4:15,9,0,2:4,15:3,2:152.109:366.612,131.36:0.298675,0.298675:0.0,0.000127996,0.999873	0/0:13:0.976022:4,4:4-4,4-4:9,4,0,0:4,9:NULL:70.0754:326.675,113.385:0.0,0.0:1.01814e-29,0.0139402,0.986089
+chr1	3021480	.	ATGATGATGATG	.	.	.	END=3021491;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999619:4,4:4-4,4-4:15,12,0,0:4,15:NULL:172.657:366.612,131.36:0.0,0.0:0.0,0.000249006,0.999751	0/0:35:1.0:4,4:4-4,4-4:21,14,0,0:4,21:NULL:202.925:326.675,113.385:0.0,0.0:0.0,5.06534e-06,0.999995
+chr1	3029298	.	AGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAG	.	.	END=3029309;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0250924:10,10:1-13,1-13:0,9,0,2:NULL:10,2:102.272:366.612,131.36:4.66296,4.66296:4.77053e-15,0.489352,0.510706	0/0:51:1.0:6,6:6-6,6-6:37,14,0,0:6,37:NULL:279.964:326.675,113.385:0.0,0.0:0.0,6.57464e-11,1.0
+chr1	3030350	.	TTTATTTATTTA	.	.	.	END=3030361;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:18,16,0,2:3,18:2,2:235.97:366.612,131.36:0.0,0.0:0.0,6.94948e-06,0.999994	0/0:29:0.99982:3,3:3-3,3-3:15,11,0,3:3,15:2,3:178.082:326.675,113.385:0.0,0.0:0.0,8.74391e-05,0.999917
+chr1	3034212	.	ATCTATCTATCT	.	.	.	END=3034223;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:216.349:366.612,131.36:0.0,0.0:0.0,7.31421e-06,0.999994	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:295.256:326.675,113.385:0.0,0.0:0.0,1.88135e-07,1.0
+chr1	3045469	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA	.	.	END=3045496;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.219972:21,21:19-21,19-21:3,9,0,2:21,3:14,2:117.372:366.612,131.36:0.822319,0.822319:0.0,0.0,1.0	0/0:61:0.993315:14,14:13-14,13-14:20,21,0,20:13,3|14,17:4,1|5,2|6,2|8,2|9,2|10,3|12,3|13,5:450.41:326.675,113.385:0.21692,0.21692:3.05269e-18,0.00668016,0.993338
+chr1	3050738	.	TATTTATTTATTTATTTATTTATTTATT	TATTTATTTATT	.	.	END=3050765;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0818061:3,3:1-6,1-6:0,12,0,2:NULL:3,2:123.205:366.612,131.36:1.27442,1.27442:1.0,0.0,0.0	0/0:33:0.999981:7,7:7-7,7-7:18,9,0,6:7,18:5,5|6,1:198.876:326.675,113.385:0.0,0.0:0.0,1.1874e-05,0.999987
+chr1	3050955	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3051002;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.569695:19,19:17-20,17-20:15,8,0,8:17,3|18,2|19,10:6,1|7,2|12,1|13,2|16,1|17,1:221.818:366.612,131.36:0.927845,0.927845:1.0,0.0,0.0	0/0:45:0.624164:24,24:23-24,23-24:12,14,0,19:23,4|24,8:5,1|7,2|9,1|11,3|12,1|14,1|16,2|18,3|21,1|22,3|23,1:336.158:326.675,113.385:0.437216,0.437216:1.08153e-07,0.371064,0.628986
+chr1	3051394	.	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	.	.	END=3051533;RU=tttttgg;PERIOD=7;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/4:44:0.271392:17,33:12-22,27-40:0,8,11,24:NULL:3,3|4,2|5,2|6,1|7,1|8,1|9,1|10,1|11,3|12,1|14,1|15,2|16,1|17,4:373.0:366.612,131.36:3.3949,3.70244:0.0,0.99537,0.00464368	1/3:64:0.735437:6,24:5-14,21-31:6,13,7,34:5,2|6,2|11,2:3,6|4,1|5,6|6,3|7,1|8,2|9,3|10,1|12,2|13,2|14,3|15,1|16,3:567.888:326.675,113.385:2.62352,2.31001:0.0,1.0,0.0
+chr1	3062124	.	ATACATACATACATACATACATACATACATACATACATACATAC	.	.	.	END=3062167;RU=atac;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999926:11,11:11-16,11-16:16,17,0,12:11,16:4,2|5,5|6,1|7,1|10,3:309.428:366.612,131.36:1.95404,1.95404:9.34602e-34,3.55638e-05,0.999964	0/0:67:1.0:11,11:11-11,11-11:33,10,0,24:11,33:2,1|3,2|4,5|5,3|7,5|8,2|9,3|10,3:408.226:326.675,113.385:0.0,0.0:0.0,7.09676e-10,1.0
+chr1	3063324	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=3063367;RU=attt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0401205:7,7:7-10,7-10:0,6,0,4:NULL:3,3|4,1:84.8502:366.612,131.36:1.35575,1.35575:0.460155,0.439871,0.100118	0/0:49:0.999985:11,11:3-11,3-11:18,18,0,11:11,18:4,1|5,1|6,1|7,3|8,3|10,2:326.395:326.675,113.385:3.17431,3.17431:3.81225e-40,2.08506e-05,0.999979
+chr1	3068357	.	TGTGTGTGTGTG	TGTGTGTGTG	.	.	END=3068368;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.0:5,5:5-5,5-5:28,14,0,0:5,28:NULL:237.617:366.612,131.36:0.0,0.0:1.0,3.0363e-08,0.0	0/0:56:1.0:6,6:6-6,6-6:34,16,0,4:6,34:5,4:310.554:326.675,113.385:0.0,0.0:0.0,2.88506e-10,1.0
+chr1	3072369	.	TTTATTTATTTA	.	.	.	END=3072380;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999994:3,3:3-3,3-3:19,18,0,0:3,19:NULL:243.124:366.612,131.36:0.0,0.0:0.0,1.2668e-05,0.999987	0/0:55:1.0:3,3:3-3,3-3:38,14,0,3:3,38:2,3:300.933:326.675,113.385:0.0,0.0:0.0,9.70525e-12,1.0
+chr1	3072798	.	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=3072822;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999778:5,5:5-5,5-5:14,17,0,5:5,14:3,3|4,2:248.589:366.612,131.36:0.0,0.0:0.0,0.000141535,0.999858	0/0:57:1.0:5,5:5-5,5-5:24,24,0,9:5,24:3,6|4,3:383.48:326.675,113.385:0.0,0.0:0.0,2.30288e-07,1.0
+chr1	3074617	.	GAAAGAAAGAAA	.	.	.	END=3074628;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:31,7,0,0:3,31:NULL:187.183:366.612,131.36:0.0,0.0:0.0,1.99785e-09,1.0	0/0:56:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:290.927:326.675,113.385:0.0,0.0:0.0,9.75116e-13,1.0
+chr1	3074661	.	CATGCATGCATGCATG	CATGCATGCATGCATGCATG	.	.	END=3074676;RU=catg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999956:5,5:5-5,5-5:18,13,0,0:5,18:NULL:190.145:366.612,131.36:0.0,0.0:0.0,2.90782e-05,0.999972	0/0:45:1.0:4,4:4-4,4-4:34,11,0,0:4,34:NULL:240.772:326.675,113.385:0.0,0.0:0.0,6.64784e-10,1.0
+chr1	3078669	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3078700;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:31:0.0317504:36,36:33-36,33-36:0,9,0,21:NULL:6,2|7,1|12,4|15,1|18,2|19,1|21,1|22,1|25,2|26,1|30,2|31,1|33,2:249.104:366.612,131.36:0.717805,0.717805:0.0,0.0,1.0	0/1:70:0.398947:16,19:16-16,4-19:31,19,0,18:15,4|16,25|17,2:6,2|7,1|8,2|9,4|12,2|13,1|14,3|15,1|18,1|19,1:487.907:326.675,113.385:0.0,5.6364:6.95224e-32,1.39769e-10,1.0
+chr1	3079448	.	TAAATAAATAAA	.	.	.	END=3079459;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.993512:3,3:3-3,3-3:9,19,0,2:3,9:2,1|3,1:217.894:366.612,131.36:0.0,0.0:6.05535e-38,0.00285955,0.997148	0/0:59:1.0:3,3:3-3,3-3:34,25,0,0:3,34:NULL:363.805:326.675,113.385:0.0,0.0:0.0,9.55245e-10,1.0
+chr1	3079495	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=3079545;RU=aag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.313861:24,24:22-25,22-25:2,16,0,8:24,2:8,1|10,1|11,1|15,1|20,2|22,1|24,1:218.24:366.612,131.36:0.736676,0.736676:0.0,0.0,1.0	0/0:64:0.999927:17,17:17-17,17-17:17,25,0,20:17,17:4,1|6,1|7,1|9,1|10,5|11,2|12,2|13,2|14,1|15,1|16,3:456.172:326.675,113.385:0.220506,0.220506:3.04352e-34,3.54294e-05,0.999964
+chr1	3083387	.	TGACTTGACTTGACT	.	.	.	END=3083401;RU=tgact;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,22,0,0:3,23:NULL:298.503:366.612,131.36:0.0,0.0:0.0,7.11885e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:34,13,0,3:3,34:2,3:273.285:326.675,113.385:0.0,0.0:0.0,2.83012e-10,1.0
+chr1	3086726	.	ACCCACCCACCC	.	.	.	END=3086737;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.99608:3,3:3-3,3-3:11,32,0,0:3,11:NULL:333.133:366.612,131.36:0.0,0.0:2.92855e-34,0.00311361,0.996897	0/0:73:0.999993:3,3:3-3,3-3:19,47,0,7:3,19:2,7:542.298:326.675,113.385:0.0,0.0:0.0,1.27627e-05,0.999987
+chr1	3086953	.	AACAACAACAACAAC	AACAACAACAACAACAAC	.	.	END=3086967;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999987:6,6:6-6,6-6:19,24,0,4:6,19:3,1|4,3:327.885:366.612,131.36:0.0,0.0:0.0,1.24015e-05,0.999987	0/0:74:1.0:5,5:5-5,5-5:37,31,0,6:5,37:3,1|4,5:470.789:326.675,113.385:0.0,0.0:0.0,3.12612e-11,1.0
+chr1	3087313	.	GGTTGGTTGGTT	.	.	.	END=3087324;RU=ggtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.267226:3,3:1-3,1-3:2,31,0,0:3,2:NULL:290.32:366.612,131.36:0.697862,0.697862:2.84597e-06,0.590135,0.40994	0/0:44:0.999862:3,3:3-3,3-3:16,28,0,0:3,16:NULL:319.124:326.675,113.385:0.0,0.0:0.0,0.000130932,0.999872
+chr1	3091604	.	GGGTGGGTGGGT	.	.	.	END=3091615;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.930378:3,3:3-3,3-3:7,6,0,0:3,7:NULL:80.4305:366.612,131.36:0.0,0.0:5.49869e-21,0.0321949,0.967864	0/0:50:0.999847:3,3:3-3,3-3:16,34,0,0:3,16:NULL:360.367:326.675,113.385:0.0,0.0:0.0,0.000119209,0.999881
+chr1	3095754	.	TCTCTCTCTCTC	.	.	.	END=3095765;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:6,6:6-6,6-6:25,18,0,0:6,25:NULL:259.181:366.612,131.36:0.0,0.0:0.0,1.55939e-07,1.0	0/0:51:1.0:6,6:6-6,6-6:27,20,0,3:6,27:5,2|6,1:315.128:326.675,113.385:0.139319,0.139319:0.0,2.1589e-08,1.0
+chr1	3095926	.	AAAATAAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAAT	.	.	END=3095945;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.0:5,5:5-5,5-5:28,14,0,3:5,28:2,1|3,1|4,1:267.093:366.612,131.36:0.0,0.0:0.0,1.22478e-08,1.0	0/0:48:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:252.882:326.675,113.385:0.0,0.0:0.0,8.81486e-10,1.0
+chr1	3095965	.	CAAACAAACAAA	.	.	.	END=3095976;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.845777:3,3:3-3,3-3:5,17,0,2:3,5:2,2:186.828:366.612,131.36:0.0,0.0:6.79616e-16,0.074876,0.92522	0/0:55:1.0:3,3:3-3,3-3:33,20,0,2:3,33:2,2:321.64:326.675,113.385:0.0,0.0:0.0,4.6792e-10,1.0
+chr1	3097482	.	TTGTTGTTGTTGTTG	.	.	.	END=3097496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:5,5:5-5,5-5:20,11,0,0:5,20:NULL:182.636:366.612,131.36:0.0,0.0:0.0,6.53813e-06,0.999994	0/0:51:1.0:5,5:5-5,5-5:33,16,0,2:5,33:3,1|4,1:299.39:326.675,113.385:0.0,0.0:0.0,6.26055e-10,1.0
+chr1	3099936	.	GGGTGGGTGGGT	.	.	.	END=3099947;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995606:3,3:3-3,3-3:11,19,0,0:3,11:NULL:210.358:366.612,131.36:0.0,0.0:1.47805e-34,0.00247729,0.997527	0/0:56:0.994187:3,3:3-3,3-3:10,42,0,4:3,10:2,4:444.101:326.675,113.385:0.0,0.0:2.9741e-31,0.00299531,0.997012
+chr1	3105146	.	GGAAGGAAGGAA	GGAAGGAA	.	.	END=3105157;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.101965:2,2:2-3,2-3:0,15,0,2:NULL:2,2:149.768:366.612,131.36:0.390807,0.390807:0.150094,0.489507,0.360547	0/0:45:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:265.389:326.675,113.385:0.139319,0.139319:0.0,7.22832e-08,1.0
+chr1	3116455	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3116512;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.138491:22,22:19-22,19-22:2,7,0,0:22,2:NULL:72.0894:366.612,131.36:1.39572,1.39572:1.0,0.0,0.0	0/0:8:0.0319735:29,29:26-29,26-29:0,5,0,2:NULL:14,1|27,1:63.3289:326.675,113.385:0.775065,0.775065:0.170548,0.491322,0.338258
+chr1	3120976	.	TTGTTGTTGTTG	.	.	.	END=3120987;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:21,21,0,0:4,21:NULL:271.316:366.612,131.36:0.0,0.0:0.0,4.39296e-06,0.999995	0/0:70:1.0:4,4:4-4,4-4:45,22,0,3:4,45:3,3:402.864:326.675,113.385:0.0,0.0:0.0,1.57143e-13,1.0
+chr1	3122158	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3122191;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.385809:19,19:19-20,19-20:4,29,0,3:19,4:7,1|9,1|17,1:298.939:366.612,131.36:0.696174,0.696174:5.99569e-16,0.144868,0.855214	0/0:106:0.999857:17,17:9-17,9-17:48,40,0,17:9,3|16,4|17,39|18,2:5,1|8,1|9,3|10,1|12,2|13,1|14,1|15,6|16,1:767.221:326.675,113.385:3.24656,3.24656:0.0,0.000144555,0.999857
+chr1	3122249	.	CAGACAGACAGA	.	.	.	END=3122260;RU=caga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:37,9,0,0:3,37:NULL:227.276:366.612,131.36:0.0,0.0:0.0,3.83981e-11,1.0	0/0:90:1.0:3,3:3-3,3-3:58,29,0,3:3,58:2,3:515.856:326.675,113.385:0.0,0.0:0.0,7.92967e-18,1.0
+chr1	3125367	.	AACAAACAAACAAACA	AACA	.	.	END=3125382;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0664576:1,1:1-1,1-1:0,15,0,0:NULL:NULL:131.572:366.612,131.36:0.0,0.0:0.296148,0.540177,0.1637	0/0:53:1.0:4,4:4-4,4-4:28,20,0,5:4,28:3,5:327.977:326.675,113.385:0.0,0.0:0.0,1.31461e-08,1.0
+chr1	3125745	.	TTATTATTATTATTA	TTATTATTATTATTATTATTA	.	.	END=3125759;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0303655:7,7:7-10,7-10:0,5,0,0:NULL:NULL:44.1227:366.612,131.36:1.34223,1.34223:0.0,0.0,1.0	0/0:57:1.0:5,5:4-5,4-5:34,16,0,7:4,2|5,32:3,1|4,6:348.986:326.675,113.385:0.169767,0.169767:0.0,1.65507e-06,1.0
+chr1	3130290	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3130337;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:37:0.382746:24,42:24-25,23-42:15,17,0,5:23,4|24,8|25,3:14,1|17,1|19,1|21,1|40,1:291.567:366.612,131.36:0.358902,8.71943:5.58835e-11,0.00100609,0.998998	0/1:74:0.28766:24,33:24-24,23-33:21,19,0,34:22,2|23,5|24,11|25,3:4,1|7,5|9,2|10,3|12,2|13,3|14,1|15,5|16,3|17,2|18,2|20,2|25,1|26,1|31,1:576.311:326.675,113.385:0.0990099,3.5386:1.17544e-25,2.47281e-10,1.0
+chr1	3131093	.	TGACTGACTGAC	.	.	.	END=3131104;RU=tgac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:21,24,0,0:3,21:NULL:299.824:366.612,131.36:0.0,0.0:0.0,4.24596e-06,0.999995	0/0:69:1.0:3,3:3-3,3-3:46,23,0,0:3,46:NULL:387.79:326.675,113.385:0.0,0.0:0.0,1.31898e-13,1.0
+chr1	3132979	.	CTCCCTCCCTCC	.	.	.	END=3132990;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:21,16,0,0:3,21:NULL:232.377:366.612,131.36:0.0,0.0:0.0,4.51274e-06,0.999995	0/0:43:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:246.583:326.675,113.385:0.0,0.0:0.0,6.02507e-09,1.0
+chr1	3134119	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3134160;RU=ttg;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.978038:14,14:13-14,13-14:9,18,0,11:14,9:3,1|4,1|6,2|7,1|8,1|10,1|12,2|13,2:291.17:366.612,131.36:0.390807,0.390807:1.78453e-18,0.0105156,0.989507	0/0:78:1.0:14,14:14-14,14-14:33,20,0,23:14,33:4,1|5,1|6,1|7,5|8,2|9,5|10,1|11,1|12,5|13,1:503.566:326.675,113.385:0.0,0.0:0.0,6.14385e-10,1.0
+chr1	3153384	.	AATAAATAAATA	.	.	.	END=3153395;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:172.88:366.612,131.36:0.0,0.0:0.0,1.09816e-08,1.0	0/0:25:0.99958:3,3:3-3,3-3:14,8,0,3:3,14:2,3:150.528:326.675,113.385:0.0,0.0:1.58e-43,0.000173232,0.999827
+chr1	3161509	.	GGGTGGGTGGGT	.	.	.	END=3161520;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.994566:3,3:3-3,3-3:11,11,0,0:3,11:NULL:145.407:366.612,131.36:0.0,0.0:7.00828e-33,0.00300606,0.997003	0/0:36:0.458435:3,3:2-3,2-3:3,30,0,3:3,3:2,3:309.733:326.675,113.385:0.429525,0.429525:5.10445e-09,0.356641,0.643398
+chr1	3162873	.	TGCTGCTGCTGC	TGCTGCTGCTGCTGCTGC	.	.	END=3162884;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.999286:6,6:6-6,6-6:14,6,0,0:6,14:NULL:113.711:366.612,131.36:0.0,0.0:0.0,0.000160033,0.999842	0/0:43:1.0:4,4:4-4,4-4:30,13,0,0:4,30:NULL:235.308:326.675,113.385:0.0,0.0:0.0,7.52117e-09,1.0
+chr1	3163213	.	ATTCTATTCTATTCT	.	.	.	END=3163227;RU=attct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999547:3,3:3-3,3-3:14,11,0,0:3,14:NULL:153.89:366.612,131.36:0.0,0.0:3e-45,0.000269175,0.999735	0/0:20:0.999735:3,3:3-3,3-3:15,5,0,0:3,15:NULL:107.258:326.675,113.385:0.0,0.0:0.0,0.000138567,0.999864
+chr1	3164426	.	TCTTCCTCTTCCTCTTCC	.	.	.	END=3164443;RU=tcttcc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:247.76:366.612,131.36:0.0,0.0:0.0,8.32048e-07,1.0	0/0:38:0.999874:3,3:3-3,3-3:15,20,0,3:3,15:2,3:272.773:326.675,113.385:0.0,0.0:0.0,0.000119291,0.999881
+chr1	3164472	.	TCATCATCATCATCA	.	.	.	END=3164486;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:31,13,0,0:5,31:NULL:245.878:366.612,131.36:0.0,0.0:0.0,5.79757e-09,1.0	0/0:29:0.999994:5,5:5-5,5-5:19,10,0,0:5,19:NULL:171.622:326.675,113.385:0.0,0.0:0.0,1.43699e-05,0.999986
+chr1	3166251	.	AAACAAACAAAC	.	.	.	END=3166262;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:232.352:366.612,131.36:0.0,0.0:0.0,4.06024e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:185.606:326.675,113.385:0.0,0.0:0.0,1.43407e-06,1.0
+chr1	3169195	.	GTAGTAGTAGTA	.	.	.	END=3169206;RU=gta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:23,12,0,2:4,23:3,2:215.508:366.612,131.36:0.0,0.0:0.0,3.28087e-07,1.0	0/0:28:1.00001:4,4:4-4,4-4:23,5,0,0:4,23:NULL:131.731:326.675,113.385:0.0,0.0:0.0,8.37304e-07,1.0
+chr1	3169225	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=3169258;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.98882:13,13:13-14,13-14:11,15,0,16:13,11:5,1|6,3|7,1|8,2|9,3|10,1|11,1|12,4:311.885:366.612,131.36:0.341835,0.341835:0.998596,0.00140777,2.52175e-40	0/0:29:0.998848:17,17:10-17,10-17:14,6,0,8:17,14:5,1|7,1|8,1|13,2|14,1|16,2:177.981:326.675,113.385:3.49571,3.49571:7.17539e-19,0.000371304,0.999629
+chr1	3169275	.	AATAAATAAATA	.	.	.	END=3169286;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.98337:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.015:366.612,131.36:0.0,0.0:2.11896e-29,0.0105485,0.989476	0/0:22:0.996749:3,3:3-3,3-3:11,8,0,3:3,11:2,3:136.283:326.675,113.385:0.0,0.0:5.49383e-36,0.00126031,0.998746
+chr1	3170541	.	ACAAAACAAAACAAAACAAA	.	.	.	END=3170560;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:23,21,0,2:4,23:2,1|3,1:294.167:366.612,131.36:0.0,0.0:0.0,7.87942e-07,1.0	0/0:49:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:303.202:326.675,113.385:0.0,0.0:0.0,1.04162e-07,1.0
+chr1	3180457	.	GGGTGGGTGGGT	.	.	.	END=3180468;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.927026:3,3:3-3,3-3:7,20,0,0:3,7:NULL:201.976:366.612,131.36:0.0,0.0:2.07325e-21,0.0459557,0.95412	0/0:39:0.998747:3,3:3-3,3-3:13,26,0,0:3,13:NULL:272.37:326.675,113.385:0.0,0.0:5.06635e-39,0.000898473,0.999104
+chr1	3184125	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3184152;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.972076:19,19:19-20,19-20:9,9,0,13:19,9:5,1|6,2|7,2|9,1|11,1|12,1|13,2|15,1|17,2:230.576:366.612,131.36:0.398507,0.398507:0.0,0.0,1.0	0/0:39:0.714594:14,14:13-14,13-14:18,5,0,15:13,5|14,13:5,1|6,2|7,5|8,2|11,3|13,2:253.613:326.675,113.385:0.458235,0.458235:1.65788e-13,0.285296,0.714708
+chr1	3184524	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=3184541;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999765:6,6:6-6,6-6:15,19,0,3:6,15:5,3:255.504:366.612,131.36:0.0,0.0:0.0,0.000105367,0.999895	0/0:43:1.0:6,6:6-6,6-6:23,14,0,5:6,23:3,1|5,4:254.377:326.675,113.385:0.139319,0.139319:0.0,3.86922e-07,1.0
+chr1	3185654	.	AGAGAGAGAGAG	.	.	.	END=3185665;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999571:6,6:6-6,6-6:14,16,0,0:6,14:NULL:206.063:366.612,131.36:0.0,0.0:5.27875e-34,0.000291058,0.999712	0/0:35:1.00001:6,6:6-6,6-6:21,14,0,0:6,21:NULL:210.56:326.675,113.385:0.0,0.0:0.0,2.89898e-06,1.0
+chr1	3188551	.	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	.	.	END=3188606;RU=gcttttt;PERIOD=7;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.98448:7,7:7-7,7-7:9,9,0,4:7,9:5,2|6,1|7,1:146.862:366.612,131.36:0.0,0.0:0.990598,0.00942173,4.03629e-19	0/0:39:0.932444:8,8:8-8,8-8:6,15,0,18:8,6:3,6|4,4|5,2|6,2|7,2|8,2:285.442:326.675,113.385:0.0,0.0:8.04339e-25,0.0264434,0.973607
+chr1	3189480	.	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	END=3189527;RU=tta;PERIOD=3;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.627346:17,17:17-20,17-20:5,14,0,9:17,5:5,1|9,2|10,2|11,3|15,1:227.535:366.612,131.36:1.36051,1.36051:3.08894e-09,0.0980891,0.902012	0/0:32:0.980651:16,16:15-16,15-16:9,11,0,11:16,9:4,1|5,2|8,1|9,1|10,1|12,1|13,1|14,1|15,2:228.914:326.675,113.385:0.36513,0.36513:4.46609e-12,0.00943155,0.990589
+chr1	3190239	.	TTTGTTTGTTTGTTTG	.	.	.	END=3190254;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:21,12,0,5:4,21:3,5:231.473:366.612,131.36:0.0,0.0:0.0,9.58837e-07,1.0	0/0:32:1.0:4,4:4-4,4-4:19,10,0,3:4,19:3,3:194.354:326.675,113.385:0.0,0.0:0.0,4.98852e-06,0.999995
+chr1	3192683	.	GTGTGTGTGTGTGT	.	.	.	END=3192696;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:7,7:7-8,7-8:20,8,0,5:7,20:4,1|5,1|6,3:190.257:366.612,131.36:0.195027,0.195027:3.28507e-39,2.62655e-06,1.0	0/0:31:0.999933:7,7:7-7,7-7:17,10,0,4:7,17:5,3|6,1:188.688:326.675,113.385:0.0,0.0:2.69012e-33,3.3069e-05,0.99997
+chr1	3192934	.	TATATATATATATA	.	.	.	END=3192947;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:7,7:7-7,7-7:24,8,0,0:7,24:NULL:166.924:366.612,131.36:0.0,0.0:7.6252e-41,5.24495e-07,1.0	0/0:31:1.00001:7,7:7-7,7-7:22,8,0,0:7,22:NULL:161.681:326.675,113.385:0.139319,0.139319:1.59678e-37,2.31998e-06,1.0
+chr1	3193519	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3193554;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.896001:25,26:25-26,25-26:5,6,0,5:25,3|26,2:6,1|8,1|14,1|17,1|18,1:130.22:366.612,131.36:0.363246,0.374147:0.0,0.0,1.0	0/3:54:0.357509:18,28:18-22,19-29:6,24,0,20:17,2|18,4:6,2|9,3|10,4|11,2|12,1|14,1|15,1|16,1|17,1|18,2|20,1|28,1:421.12:326.675,113.385:1.11332,3.06777:6.2436e-31,8.09123e-05,0.999919
+chr1	3194182	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194229;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.881189:25,26:25-26,26-26:9,14,0,18:25,4|26,5:6,1|7,1|8,1|10,1|14,4|15,2|16,1|17,1|18,1|19,3|23,1|24,1:322.102:366.612,131.36:0.431574,0.0:4.54279e-23,0.000752893,0.999249	0/3:44:0.309339:24,28:17-25,17-28:3,13,0,24:24,3:5,1|9,1|12,1|13,1|14,3|15,3|17,4|18,2|20,2|21,1|22,1|23,2|24,1|28,1:323.096:326.675,113.385:1.47355,2.81063:2.01499e-19,5.77486e-05,0.999942
+chr1	3194304	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194333;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:44:0.281101:16,36:16-16,16-36:21,11,0,11:15,7|16,14:5,1|6,1|9,1|13,1|14,1|15,1|16,1|19,2|22,1|33,1:312.349:366.612,131.36:0.0,7.03249:0.0,9.98693e-29,1.0	0/3:39:0.303584:15,37:15-16,19-39:15,9,0,15:14,2|15,11|16,2:5,1|8,1|9,1|10,1|11,1|16,3|17,1|18,1|19,1|21,1|22,1|35,1|37,1:292.474:326.675,113.385:0.195027,4.9142:0.0,5.51792e-15,1.0
+chr1	3198131	.	AAAAAACAAAAAACAAAAAAC	AAAAAACAAAAAACAAAAAACAAAAAAC	.	.	END=3198151;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.379613:4,4:3-4,3-4:2,11,0,6:4,2:2,2|3,4:152.071:366.612,131.36:0.469019,0.469019:5.91913e-40,0.0394766,0.960594	0/0:21:0.999434:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.589:326.675,113.385:0.0,0.0:0.0,0.000348704,0.999652
+chr1	3207640	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3207663;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0797823:11,11:6-12,6-12:0,11,0,10:NULL:2,3|3,1|4,1|6,3|9,1|10,1:178.745:366.612,131.36:2.00988,2.00988:4.63405e-39,0.0583273,0.941757	0/0:34:0.985475:6,6:6-6,6-6:9,16,0,9:6,9:3,2|4,3|5,4:247.302:326.675,113.385:0.0,0.0:3.58493e-26,0.0070461,0.992971
+chr1	3209528	.	AAAAACAAAAACAAAAACAAAAAC	.	.	.	END=3209551;RU=aaaaac;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.916764:4,4:1-4,1-4:7,14,0,0:4,7:NULL:163.65:366.612,131.36:0.5093,0.5093:4.93839e-24,0.0720031,0.92809	0/0:35:1.00001:4,4:4-4,4-4:21,10,0,4:4,21:2,1|3,3:203.768:326.675,113.385:0.0,0.0:0.0,1.48659e-06,1.0
+chr1	3209577	.	AACAAAACAAAACAA	.	.	.	END=3209591;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999471:3,3:3-3,3-3:14,10,0,0:3,14:NULL:149.919:366.612,131.36:0.0,0.0:0.0,0.000357457,0.999644	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:195.055:326.675,113.385:0.0,0.0:0.0,3.04889e-07,1.0
+chr1	3212208	.	TATTTATTTATT	.	.	.	END=3212219;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999776:3,3:3-3,3-3:15,22,0,2:3,15:2,2:275.853:366.612,131.36:0.0,0.0:0.0,0.000127184,0.999873	0/0:27:0.999844:3,3:3-3,3-3:16,11,0,0:3,16:NULL:161.29:326.675,113.385:0.0,0.0:0.0,8.8955e-05,0.999911
+chr1	3219276	.	ATTATTATTATTATTATTATTATTATTATTATT	ATTATTATTATTATTATTATTATTATTATT	.	.	END=3219308;RU=att;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.993726:10,10:9-10,9-10:11,8,0,3:10,11:3,1|9,2:143.553:366.612,131.36:0.21692,0.21692:0.996844,0.00316656,1.55989e-15	0/0:13:0.652411:11,11:10-11,10-11:5,7,0,0:11,5:NULL:87.0853:326.675,113.385:0.486863,0.486863:2.85734e-08,0.237372,0.76265
+chr1	3224265	.	AAACAAACAAAC	.	.	.	END=3224276;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.555:366.612,131.36:0.0,0.0:0.0,3.11222e-06,1.0	0/0:31:0.999993:3,3:3-3,3-3:19,12,0,0:3,19:NULL:180.318:326.675,113.385:0.0,0.0:0.0,1.19101e-05,0.999987
+chr1	3229231	.	AACAAAACAAAACAAAACAAAACAA	AACAAAACAAAACAAAACAA	.	.	END=3229255;RU=aacaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.969771:4,4:4-4,4-4:9,9,0,0:4,9:NULL:117.579:366.612,131.36:0.0,0.0:0.990731,0.00929149,1.05996e-22	0/0:30:0.999593:5,5:5-5,5-5:14,8,0,8:5,14:2,1|3,2|4,5:184.138:326.675,113.385:0.0,0.0:1.17395e-36,0.000157612,0.999843
+chr1	3230661	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3230700;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0246166:29,29:18-29,18-29:0,9,0,6:NULL:11,1|12,1|17,1|20,1|22,1|27,1:132.661:366.612,131.36:2.88399,2.88399:3.81652e-23,0.111212,0.888885	1/0:40:0.977378:19,20:17-21,19-21:8,15,0,15:19,4|20,4:4,1|6,1|7,3|8,1|9,1|11,1|12,1|13,1|14,2|16,1|17,1|18,1:301.046:326.675,113.385:0.922547,0.601276:0.000508468,0.979059,0.0204738
+chr1	3247218	.	AAAACAAAACAAAAC	.	.	.	END=3247232;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999292:3,3:3-3,3-3:13,15,0,3:3,13:2,3:213.981:366.612,131.36:0.0,0.0:4.881e-42,0.000339974,0.99966	0/0:24:0.99952:3,3:3-3,3-3:14,8,0,2:3,14:2,2:141.793:326.675,113.385:0.0,0.0:6e-45,0.000223836,0.99978
+chr1	3248425	.	TTGCTTGCTTGCTTGC	.	.	.	END=3248440;RU=ttgc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:32,16,0,2:4,32:2,1|3,1:292.716:366.612,131.36:0.0,0.0:0.0,9.84893e-10,1.0	0/0:42:1.0:4,4:4-4,4-4:28,14,0,0:4,28:NULL:236.422:326.675,113.385:0.0,0.0:0.0,3.28777e-08,1.0
+chr1	3250571	.	ACCACCACCACCACC	ACCACCACCACC	.	.	END=3250585;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.0:4,4:4-4,4-4:21,18,0,0:4,21:NULL:250.656:366.612,131.36:0.0,0.0:1.0,2.14843e-06,0.0	0/0:40:1.0:5,5:4-5,4-5:27,12,0,0:5,27:NULL:215.956:326.675,113.385:0.169767,0.169767:0.0,8.70194e-08,1.0
+chr1	3256241	.	AAACAAACAAAC	.	.	.	END=3256252;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.187:366.612,131.36:0.0,0.0:0.0,1.7126e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:200.029:326.675,113.385:0.0,0.0:0.0,5.2323e-09,1.0
+chr1	3257455	.	GAAGAAGAAGAAGAA	.	.	.	END=3257469;RU=gaa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:23,11,0,3:5,23:4,3:216.8:366.612,131.36:0.0,0.0:0.0,4.39512e-07,1.0	0/0:38:1.0:5,5:5-5,5-5:30,8,0,0:5,30:NULL:194.078:326.675,113.385:0.0,0.0:0.0,1.01573e-08,1.0
+chr1	3263762	.	ACCCACCCACCC	.	.	.	END=3263773;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999996:3,3:3-3,3-3:20,15,0,0:3,20:NULL:218.28:366.612,131.36:0.0,0.0:0.0,1.16154e-05,0.999987	0/0:23:0.99999:3,3:3-3,3-3:18,5,0,0:3,18:NULL:118.308:326.675,113.385:0.0,0.0:0.0,1.72567e-05,0.999986
+chr1	3266661	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3266706;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.859583:16,17:16-18,15-18:6,10,0,5:16,4|17,2:6,1|14,2|15,2:158.259:366.612,131.36:0.702063,0.743564:1.0,0.0,0.0	0/0:42:0.969164:23,23:13-23,13-23:16,11,0,12:22,3|23,13:6,1|12,1|14,2|15,1|16,1|17,1|19,1|20,1|22,3:271.086:326.675,113.385:4.42132,4.42132:2.23068e-12,0.0300615,0.969994
+chr1	3266707	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3266746;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:33:0.271464:20,23:20-23,21-26:3,14,0,15:20,3:6,3|7,3|8,1|10,1|11,1|13,1|15,2|21,2|23,1:261.687:366.612,131.36:0.726627,1.33784:4.26235e-26,2.79685e-05,0.999972	0/1:38:0.307853:20,21:20-20,15-22:11,11,0,13:20,11:5,1|7,1|10,1|14,1|16,1|17,1|18,1|19,5|21,1:255.799:326.675,113.385:0.0,1.50169:6.83388e-24,2.67566e-08,1.0
+chr1	3283714	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=3283733;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998014:5,5:5-5,5-5:13,20,0,3:5,13:2,1|3,2:255.744:366.612,131.36:0.0,0.0:1.99649e-38,0.00152728,0.99848	0/0:36:1.0:5,5:4-5,4-5:19,10,0,6:5,19:2,1|3,1|4,4:218.899:326.675,113.385:0.311527,0.311527:0.0,8.6473e-06,0.999994
+chr1	3284144	.	AACCAACCAACC	.	.	.	END=3284155;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:276.757:366.612,131.36:0.0,0.0:0.0,3.40343e-08,1.0	0/0:22:0.999893:3,3:3-4,3-4:16,5,0,0:3,16:NULL:107.814:326.675,113.385:0.425627,0.425627:0.0,5.48176e-05,0.999948
+chr1	3284442	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3284483;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:47:0.804412:22,23:21-22,21-25:14,13,0,17:21,6|22,8:5,1|6,2|7,1|8,1|9,1|10,1|11,1|12,1|15,1|17,2|18,1|21,2|22,1|23,1:336.16:366.612,131.36:0.484441,1.48323:2.936e-42,1.0899e-08,1.0	0/3:42:0.302197:21,33:21-21,21-33:18,9,0,12:21,18:5,1|13,1|14,1|15,1|17,1|18,1|19,3|20,2|33,1:272.176:326.675,113.385:0.0,6.07264:2.65257e-24,2.95194e-07,1.0
+chr1	3284513	.	TGAATGAATGAATGAATGAATGAA	TGAATGAATGAATGAATGAATGAATGAA	.	.	END=3284536;RU=tgaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:0.999928:6,7:6-7,7-7:29,8,0,0:6,7|7,22:NULL:208.743:366.612,131.36:0.382696,0.0:0.0,2.17331e-12,1.0	0/0:41:1.0:6,6:6-6,6-6:26,10,0,5:6,26:2,1|3,2|5,2:234.8:326.675,113.385:0.0,0.0:0.0,7.37534e-08,1.0
+chr1	3286188	.	CATCATCATCAT	.	.	.	END=3286199;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:28,16,0,3:4,28:3,3:276.88:366.612,131.36:0.0,0.0:0.0,1.38019e-08,1.0	0/0:28:0.999774:4,4:4-4,4-4:15,11,0,2:4,15:3,2:169.069:326.675,113.385:0.0,0.0:0.0,0.000113157,0.999888
+chr1	3287342	.	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC,TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	.	.	END=3287441;RU=tctcc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0428838:8,8:1-8,1-8:0,3,0,3:NULL:7,1|8,2:47.3284:366.612,131.36:1.99367,1.99367:1.0,0.0,0.0	2/2:17:0.0230831:12,12:5-15,5-15:0,6,0,9:NULL:5,2|7,1|9,3|10,1|11,1|12,1:120.258:326.675,113.385:4.65146,4.65146:1.0,0.0,0.0
+chr1	3287445	.	TCCCCCTCCCCCTCCCCCTCCCCC	TCCCCCTCCCCCTCCCCCTCCCCCTCCCCC	.	.	END=3287468;RU=tccccc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.557197:5,5:5-5,5-5:4,2,0,0:5,4:NULL:34.0361:366.612,131.36:0.29703,0.29703:5.92393e-13,0.157841,0.842234	0/0:16:0.937132:4,4:4-4,4-4:8,8,0,0:4,8:NULL:109.373:326.675,113.385:0.29703,0.29703:6.49485e-17,0.047431,0.952645
+chr1	3287528	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=3287583;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:10:0.0290867:7,15:3-14,6-15:0,6,0,2:NULL:4,1|14,1:69.6104:366.612,131.36:3.94079,3.01377:6.41645e-08,0.806418,0.193633	0/0:24:0.869864:14,14:14-15,14-15:6,7,0,10:14,6:2,1|8,3|9,2|10,1|13,3:162.679:326.675,113.385:0.45695,0.45695:3.90143e-11,0.0418628,0.958209
+chr1	3298789	.	AAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	END=3298808;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999963:7,7:7-7,7-7:18,11,0,2:7,18:4,1|5,1:193.51:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:47:1.0:4,4:4-4,4-4:26,18,0,3:4,26:3,3:286.097:326.675,113.385:0.0,0.0:0.0,6.66746e-08,1.0
+chr1	3308941	.	AAAATAAAATAAAATAAAATAAAATAAAAT	AAAAT	.	.	END=3308970;RU=aaaat;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:14:0.959181:6,6:6-6,6-6:8,6,0,0:6,8:NULL:84.4534:326.675,113.385:0.0,0.0:8.40327e-25,0.0235629,0.976482
+chr1	3309296	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCT,TTCTTTCT	.	.	END=3309339;RU=ttct;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:11:0.0507287:1,2:1-2,1-2:0,11,0,0:NULL:NULL:95.391:366.612,131.36:0.499387,0.494455:0.718816,0.268655,0.0125524	0/0:18:0.950048:11,11:11-11,11-11:8,7,0,3:11,8:4,1|7,1|8,1:122.558:326.675,113.385:0.0,0.0:2.46773e-21,0.030773,0.969285
+chr1	3311045	.	AAGAAAAAGAAAAAGAAA	.	.	.	END=3311062;RU=aagaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.983812:3,3:3-3,3-3:9,16,0,0:3,9:NULL:183.474:366.612,131.36:0.0,0.0:2.32816e-26,0.0130668,0.986963	0/0:33:1.00001:3,3:3-3,3-3:22,9,0,2:3,22:2,2:180.68:326.675,113.385:0.0,0.0:0.0,1.03504e-06,1.0
+chr1	3317551	.	TAAATAAATAAA	.	.	.	END=3317562;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.60986:3,3:3-3,3-3:4,7,0,0:3,4:NULL:78.8406:366.612,131.36:0.0,0.0:5.51413e-12,0.183566,0.816501	0/0:8:0.469645:3,3:1-3,1-3:3,5,0,0:3,3:NULL:57.5009:326.675,113.385:0.339533,0.339533:2.24631e-09,0.263676,0.736329
+chr1	3317572	.	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	TA,TATATA	.	.	END=3317629;RU=ta;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.00216521:1,1:1-26,1-26:0,10,0,0:NULL:NULL:89.3505:366.612,131.36:6.01366,6.01366:0.64016,0.333863,0.0260525	2/2:2:0.00090688:3,3:1-3,1-3:0,2,0,0:NULL:NULL:19.0558:326.675,113.385:0.851255,0.851255:0.262426,0.580756,0.156859
+chr1	3317629	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3317664;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0145036:17,17:8-20,8-20:0,7,0,3:NULL:8,1|10,1|17,1:89.8084:366.612,131.36:4.75419,4.75419:0.228232,0.664371,0.107496	0/0:2:0.0227178:18,18:18-18,18-18:0,1,0,0:NULL:NULL:9.12935:326.675,113.385:0.0,0.0:0.187493,0.491102,0.321513
+chr1	3318469	.	TTTTGTTTTGTTTTG	.	.	.	END=3318483;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:2-3,2-3:23,21,0,0:3,23:NULL:290.045:366.612,131.36:0.253975,0.253975:0.0,9.8791e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:233.804:326.675,113.385:0.0,0.0:0.0,1.73051e-07,1.0
+chr1	3319830	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3319850;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999884:7,7:7-7,7-7:17,8,0,0:7,17:NULL:143.581:366.612,131.36:0.0,0.0:6e-45,7.1866e-05,0.999932	0/0:29:0.999541:7,7:7-7,7-7:14,11,0,4:7,14:4,1|5,1|6,2:186.226:326.675,113.385:0.0,0.0:2.56804e-37,0.000211661,0.999789
+chr1	3325716	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3325743;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:15:0.0305249:12,13:1-15,1-15:0,12,0,3:NULL:4,1|7,1|12,1:134.041:366.612,131.36:4.67388,4.71352:0.51569,0.449359,0.0350738	0/0:15:0.659866:14,14:14-14,14-14:5,10,0,0:14,5:NULL:112.97:326.675,113.385:0.29703,0.29703:2.65894e-06,0.2113,0.78875
+chr1	3327145	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3327194;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.453927:21,21:21-22,21-22:3,11,0,10:21,3:4,2|8,1|12,1|13,1|17,1|18,2|20,2:196.883:366.612,131.36:0.294378,0.294378:1.0,0.0,0.0	0/2:36:0.289986:25,28:24-25,23-28:10,8,0,17:23,2|25,8:5,2|7,1|8,1|10,1|12,1|13,1|14,3|15,1|16,1|17,1|21,1|23,1|24,1|28,1:268.127:326.675,113.385:0.240494,2.03792:2.52992e-12,1.94684e-05,0.99998
+chr1	3327251	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=3327290;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.950032:14,14:13-14,13-14:8,11,0,12:14,8:7,3|8,2|9,2|10,2|11,1|12,1|13,1:223.195:366.612,131.36:0.44763,0.44763:0.0,0.0,1.0	0/0:34:1.0:10,10:10-11,10-11:19,6,0,7:10,19:2,1|5,1|9,5:185.78:326.675,113.385:0.270063,0.270063:7.3456e-41,6.86667e-06,0.999994
+chr1	3339592	.	GAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=3339611;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0383828:8,8:8-10,8-10:0,8,0,0:NULL:NULL:75.7368:366.612,131.36:0.957892,0.957892:0.256004,0.503285,0.24073	0/0:23:0.991072:10,10:10-11,10-11:11,8,0,2:10,11:5,1|7,1:134.709:326.675,113.385:0.442343,0.442343:7.4509e-22,0.00419897,0.99581
+chr1	3339980	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=3340011;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999475:9,9:9-9,9-9:14,12,0,11:9,14:3,3|4,1|5,1|6,1|7,1|8,4:249.953:366.612,131.36:0.0,0.0:0.0,2.18235e-05,0.999979	0/0:27:0.999453:8,8:8-8,8-8:14,9,0,4:8,14:5,1|6,1|7,2:163.819:326.675,113.385:0.0,0.0:1.3722e-41,0.000249176,0.999751
+chr1	3340203	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=3340226;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.995765:5,5:5-5,5-5:12,15,0,0:5,12:NULL:185.688:366.612,131.36:0.0,0.0:0.998877,0.00112576,2.65565e-31	0/0:24:0.992594:6,6:6-6,6-6:10,10,0,4:6,10:3,2|5,2:158.865:326.675,113.385:0.0,0.0:2.79459e-24,0.00326886,0.996739
+chr1	3342039	.	CATGCATGCATG	.	.	.	END=3342050;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.75824:3,3:3-3,3-3:5,6,0,0:3,5:NULL:72.7852:366.612,131.36:0.0,0.0:3.67506e-17,0.125749,0.874349	0/0:11:0.955581:3,3:3-3,3-3:8,3,0,0:3,8:NULL:61.7549:326.675,113.385:0.0,0.0:8.05459e-27,0.0209154,0.979125
+chr1	3342663	.	ATAAATAAATAA	.	.	.	END=3342674;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.015:366.612,131.36:0.0,0.0:7.638e-42,1.64445e-06,1.0	0/0:25:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:133.089:326.675,113.385:0.0,0.0:2.13385e-34,2.63915e-05,0.999978
+chr1	3355412	.	ATGTATGTATGT	.	.	.	END=3355423;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:332.388:366.612,131.36:0.0,0.0:0.0,1.13867e-08,1.0	0/0:46:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:278.085:326.675,113.385:0.0,0.0:0.0,6.5236e-08,1.0
+chr1	3357227	.	TTATTTATTTAT	.	.	.	END=3357238;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,13,0,3:3,30:2,3:259.516:366.612,131.36:0.0,0.0:0.0,2.25091e-09,1.0	0/0:29:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.327:326.675,113.385:0.0,0.0:0.0,6.20079e-07,1.0
+chr1	3360114	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3360159;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.156806:26,26:22-26,22-26:2,11,0,9:26,2:4,1|5,1|7,1|11,1|12,1|15,1|18,2|19,1:183.118:366.612,131.36:1.29813,1.29813:1.00743e-06,0.171728,0.828341	0/0:37:0.636893:23,23:21-24,21-24:5,12,0,17:23,5:4,1|7,1|8,1|9,1|10,1|11,1|12,2|14,3|15,1|16,2|19,1|20,1|21,1:271.022:326.675,113.385:0.905494,0.905494:7.81328e-06,0.17981,0.820249
+chr1	3361293	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3361348;RU=ct;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.988165:17,18:15-17,15-18:8,21,0,3:17,5|18,3:5,1|6,1|11,1:254.984:366.612,131.36:0.447192,0.872412:1.0,0.0,0.0	0/0:34:0.931998:28,28:27-29,27-29:8,11,0,13:28,8:5,1|12,2|15,1|16,1|18,1|19,1|21,1|24,3|25,1|27,1:244.907:326.675,113.385:0.48807,0.48807:4.27324e-11,0.032789,0.967271
+chr1	3361348	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3361393;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.332648:30,35:23-30,23-36:4,20,0,16:30,4:7,1|11,1|12,1|14,1|17,1|18,1|19,1|20,3|22,1|24,1|25,1|28,1|31,1|35,1:338.187:366.612,131.36:2.4871,3.85048:0.0,1.165e-10,1.0	0/0:40:0.979008:23,23:20-23,20-23:9,15,0,14:23,9:5,1|6,1|7,1|9,1|10,1|11,1|12,1|13,2|14,2|18,1|22,2:290.388:326.675,113.385:1.18481,1.18481:2.84686e-16,0.0140861,0.985942
+chr1	3365708	.	TTTCTTTCTTTC	TTTC	.	.	END=3365719;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.31096:1,3:1-1,1-6:11,17,0,3:1,11:2,1|3,2:222.859:366.612,131.36:0.0,0.849641:6.25475e-16,1.0,1.7818e-41	0/0:24:0.999884:3,3:3-3,3-3:16,5,0,3:3,16:2,3:132.662:326.675,113.385:0.0,0.0:1.3774e-39,4.05224e-05,0.999963
+chr1	3365944	.	TGTGTGTGTGTG	.	.	.	END=3365955;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999788:6,6:6-6,6-6:15,12,0,4:6,15:5,4:193.16:366.612,131.36:0.0,0.0:5.2e-44,8.18518e-05,0.999918	0/0:35:1.00001:6,6:6-6,6-6:20,13,0,2:6,20:5,2:212.768:326.675,113.385:0.0,0.0:0.0,3.18577e-06,1.0
+chr1	3386948	.	TCTTTCTTTCTT	.	.	.	END=3386959;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.997909:3,3:3-3,3-3:12,17,0,0:3,12:NULL:198.545:366.612,131.36:0.0,0.0:4.33761e-40,0.00135655,0.998648	0/0:28:0.999936:3,3:3-3,3-3:17,11,0,0:3,17:NULL:170.847:326.675,113.385:0.0,0.0:0.0,4.5359e-05,0.999956
+chr1	3388595	.	ACTTCACTTCACTTC	.	.	.	END=3388609;RU=acttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.848:366.612,131.36:0.0,0.0:0.0,1.35613e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:232.247:326.675,113.385:0.0,0.0:0.0,1.93775e-06,1.0
+chr1	3390191	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTC	.	.	END=3390216;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:0.999474:5,13:3-13,13-13:23,9,0,0:3,2|5,3|13,18:NULL:203.98:366.612,131.36:1.7577,0.0:1.83634e-33,1.0,1.91746e-09	0/0:46:0.999873:13,13:12-13,12-13:30,8,0,7:12,4|13,26:5,1|7,1|10,1|11,3|12,1:265.253:326.675,113.385:0.236383,0.236383:7.1e-44,0.00012746,0.999873
+chr1	3393075	.	ACACACACACACAC	.	.	.	END=3393088;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:24,15,0,8:7,24:5,4|6,4:291.55:366.612,131.36:0.0,0.0:0.0,2.26844e-07,1.0	0/0:47:1.0:7,7:7-7,7-7:25,19,0,2:7,25:6,2:296.677:326.675,113.385:0.0990099,0.0990099:0.0,3.55528e-07,1.0
+chr1	3395163	.	AAGAAAGAAAGA	.	.	.	END=3395174;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.847:366.612,131.36:0.0,0.0:0.0,9.82503e-06,0.999993	0/0:35:1.0:3,3:3-3,3-3:18,14,0,3:3,18:2,3:217.461:326.675,113.385:0.0,0.0:0.0,9.75855e-06,0.999993
+chr1	3403481	.	TATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATA	.	.	END=3403498;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.165483:20,20:16-20,16-20:2,9,0,0:20,2:NULL:99.2001:366.612,131.36:1.26066,1.26066:0.0,0.0,1.0	0/0:21:0.956424:9,9:8-9,8-9:9,11,0,0:9,9:NULL:138.289:326.675,113.385:0.21692,0.21692:5.35994e-12,0.0302066,0.969851
+chr1	3403725	.	ACCACCACCACC	.	.	.	END=3403736;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:27,18,0,0:4,27:NULL:262.147:366.612,131.36:0.0,0.0:0.0,9.58616e-08,1.0	0/0:48:1.0:4,4:4-4,4-4:33,15,0,0:4,33:NULL:271.867:326.675,113.385:0.0,0.0:0.0,1.89479e-09,1.0
+chr1	3405593	.	TATTTATTTATT	.	.	.	END=3405604;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:22,15,0,2:3,22:2,2:234.717:366.612,131.36:0.0,0.0:0.0,6.5924e-07,1.0	0/0:23:0.999792:3,3:3-3,3-3:15,6,0,2:3,15:2,2:129.67:326.675,113.385:0.0,0.0:0.0,8.11512e-05,0.999919
+chr1	3405717	.	AACAACAACAAC	.	.	.	END=3405728;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:23,24,0,2:4,23:3,2:320.549:366.612,131.36:0.0,0.0:0.0,4.37449e-07,1.0	0/0:32:0.999896:4,4:4-4,4-4:16,12,0,4:4,16:3,4:203.848:326.675,113.385:0.0,0.0:0.0,5.05573e-05,0.999949
+chr1	3407095	.	AAAATAAAATAAAAT	.	.	.	END=3407109;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:140.173:366.612,131.36:0.0,0.0:0.0,7.06878e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:27,14,0,2:3,27:2,2:251.859:326.675,113.385:0.0,0.0:0.0,3.11129e-08,1.0
+chr1	3408522	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	END=3408561;RU=gaaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.65855:14,14:12-14,12-14:5,16,0,8:14,5:5,2|6,1|7,1|8,1|12,2|13,1:242.678:366.612,131.36:0.581383,0.581383:0.0,0.0,1.0	0/0:41:0.824507:10,10:9-10,9-10:14,19,0,8:9,2|10,12:7,1|8,2|9,5:296.651:326.675,113.385:0.469019,0.469019:6.06932e-23,0.175327,0.824741
+chr1	3408702	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3408745;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.744024:21,21:20-22,20-22:9,10,0,12:20,2|21,7:8,1|9,1|10,2|11,1|12,3|15,1|17,1|18,1|19,1:231.355:366.612,131.36:0.579863,0.579863:0.970769,0.0292858,4.61147e-07	0/0:40:0.99681:22,22:22-23,22-23:13,11,0,15:22,13:4,1|6,1|7,1|8,1|9,3|12,1|14,1|15,2|16,2|19,1|21,1:274.457:326.675,113.385:0.284901,0.284901:2.11754e-16,0.000787401,0.999217
+chr1	3412976	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3413019;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:47:0.266334:24,28:22-25,17-31:9,24,0,12:22,2|24,7:4,1|7,1|10,1|12,1|15,2|17,1|21,1|23,2|25,1|28,1:373.177:366.612,131.36:1.01145,3.92624:1.8091e-41,2.66864e-13,1.0	0/1:36:0.371156:22,24:21-24,21-24:4,17,0,15:21,2|22,2:6,1|7,1|9,1|11,2|12,1|13,1|15,1|16,1|19,1|21,2|22,2|24,1:301.446:326.675,113.385:0.661813,1.29601:9.28366e-23,0.0855846,0.914515
+chr1	3413022	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3413083;RU=tc;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.026846:1,1:1-6,1-6:0,28,0,0:NULL:NULL:246.2:366.612,131.36:1.43779,1.43779:0.994656,0.00535392,5.58523e-07	2/0:30:0.663264:29,31:29-31,30-31:8,16,0,6:29,3|30,2|31,3:5,1|10,1|14,1|23,1|26,1|31,1:243.069:326.675,113.385:0.638134,0.284901:1.47557e-10,0.955712,0.0443579
+chr1	3413143	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=3413186;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.98753:13,13:13-13,13-13:10,20,0,2:13,10:8,1|13,1:243.265:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:28:0.718486:22,22:21-22,21-22:5,13,0,9:22,5:5,1|7,1|11,2|12,1|18,1|19,1|20,1|21,1:216.602:326.675,113.385:0.442564,0.442564:1.43829e-06,0.128759,0.871339
+chr1	3415813	.	TAAATAAATAAA	.	.	.	END=3415824;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999965:3,3:2-3,2-3:18,12,0,0:3,18:NULL:174.415:366.612,131.36:0.431574,0.431574:0.0,3.20106e-05,0.999971	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.329:326.675,113.385:0.0,0.0:0.0,2.02195e-06,1.0
+chr1	3418452	.	ATGTATGTATGT	.	.	.	END=3418463;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:39,18,0,2:3,39:2,2:334.767:366.612,131.36:0.0,0.0:0.0,9.76423e-12,1.0	0/0:27:0.999963:3,3:3-3,3-3:18,9,0,0:3,18:NULL:159.97:326.675,113.385:0.0,0.0:0.0,2.95723e-05,0.999971
+chr1	3419362	.	CCTACCTACCTA	.	.	.	END=3419373;RU=ccta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:35,18,0,3:3,35:2,3:320.414:366.612,131.36:0.0,0.0:0.0,9.58282e-11,1.0	0/0:35:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:168.082:326.675,113.385:0.0,0.0:0.0,9.83807e-09,1.0
+chr1	3427014	.	TATCTATCTATC	.	.	.	END=3427025;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999856:3,3:3-3,3-3:16,23,0,0:3,16:NULL:269.899:366.612,131.36:0.0,0.0:0.0,0.000120938,0.99988	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.991:326.675,113.385:0.0,0.0:0.0,3.03433e-07,1.0
+chr1	3437788	.	AAACAAACAAAC	.	.	.	END=3437799;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,17,0,0:3,37:NULL:298.755:366.612,131.36:0.0,0.0:0.0,8.48512e-11,1.0	0/0:38:1.0:3,3:3-3,3-3:28,8,0,2:3,28:2,2:198.144:326.675,113.385:0.0,0.0:0.0,8.29792e-09,1.0
+chr1	3440889	.	AATAAATAAATA	.	.	.	END=3440900;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:32,10,0,0:3,32:NULL:214.287:366.612,131.36:0.0,0.0:0.0,1.03455e-09,1.0	0/0:25:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:119.376:326.675,113.385:0.0,0.0:0.0,2.36557e-06,1.0
+chr1	3442170	.	CCACCACCACCACCA	CCACCACCACCA	.	.	END=3442184;RU=cca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.188092:4,4:1-4,1-4:2,26,0,0:4,2:NULL:236.847:366.612,131.36:0.944183,0.944183:0.8773,0.122763,3.51555e-05	0/0:26:0.993269:5,5:5-5,5-5:11,15,0,0:5,11:NULL:183.557:326.675,113.385:0.0,0.0:4.64275e-28,0.00515572,0.994858
+chr1	3444468	.	AAGGAAGGAAGGAAGG	.	.	.	END=3444483;RU=aagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:21,22,0,0:4,21:NULL:283.756:366.612,131.36:0.0,0.0:0.0,6.78867e-06,0.999994	0/0:30:1.0:4,4:4-4,4-4:20,10,0,0:4,20:NULL:165.675:326.675,113.385:0.0,0.0:0.0,9.72115e-06,0.999993
+chr1	3452271	.	TTTGTTTGTTTG	.	.	.	END=3452282;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999857:3,3:3-3,3-3:16,14,0,0:3,16:NULL:192.804:366.612,131.36:0.0,0.0:0.0,0.000103879,0.999896	0/0:31:1.0:3,3:3-3,3-3:27,4,0,0:3,27:NULL:140.314:326.675,113.385:0.0,0.0:0.0,3.06181e-08,1.0
+chr1	3452589	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=3452612;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.466473:4,4:1-4,1-4:4,14,0,0:4,4:NULL:151.644:366.612,131.36:0.948533,0.948533:2.53305e-10,0.412736,0.587339	0/0:37:1.0:4,4:3-4,3-4:24,12,0,0:4,24:NULL:204.184:326.675,113.385:0.270063,0.270063:0.0,7.76877e-07,1.0
+chr1	3459217	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	END=3459272;RU=atct;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:1.0:13,13:13-13,13-13:20,22,0,19:13,20:2,1|4,3|5,1|6,2|7,3|9,3|10,1|11,3|12,2:426.507:366.612,131.36:0.0,0.0:1.0,2.32162e-06,3.05588e-32	0/0:67:0.999734:14,14:14-14,14-14:15,29,0,23:14,15:2,2|4,2|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2|13,4:499.709:326.675,113.385:0.0,0.0:2.04347e-33,0.00020263,0.999797
+chr1	3460396	.	GGGACGGGACGGGAC	.	.	.	END=3460410;RU=gggac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.469102:3,3:1-3,1-3:3,8,0,0:3,3:NULL:84.2472:366.612,131.36:0.472766,0.472766:9.34441e-11,0.268776,0.731226	0/0:14:0.990023:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6133:326.675,113.385:0.0,0.0:6.37805e-33,0.00536677,0.994647
+chr1	3462940	.	GTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=3462963;RU=gttt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.997688:10,10:10-10,10-10:12,12,0,8:10,12:2,1|3,2|5,1|6,3|8,1:219.73:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:44:0.999933:6,6:6-6,6-6:16,21,0,7:6,16:3,3|4,1|5,3:303.228:326.675,113.385:0.0,0.0:0.0,4.7846e-05,0.999955
+chr1	3470981	.	CACACACACACACACACACACACA	CA,CACACACACACACA	.	.	END=3471004;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:7:0.00609839:1,7:1-15,1-15:0,7,0,0:NULL:NULL:66.3926:366.612,131.36:4.33019,4.14174:0.229482,0.554589,0.215959	0/0:37:0.997233:12,12:10-12,10-12:12,11,0,12:12,12:6,2|7,1|9,3|10,3|11,3:246.658:326.675,113.385:0.422855,0.422855:8.55909e-17,0.00120403,0.9988
+chr1	3478864	.	ACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=3478881;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.995329:10,10:10-10,10-10:11,13,0,2:10,11:4,1|9,1:180.777:366.612,131.36:0.0,0.0:4.37525e-40,0.0012587,0.998747	0/0:23:0.455559:9,9:8-9,8-9:12,7,0,4:8,2|9,10:6,1|8,3:155.419:326.675,113.385:0.491073,0.491073:7.61899e-16,0.543848,0.456264
+chr1	3481278	.	TTTGTTTGTTTGTTTG	.	.	.	END=3481293;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999981:4,4:4-5,4-5:19,15,0,0:4,19:NULL:218.731:366.612,131.36:0.334882,0.334882:0.0,3.05595e-05,0.999971	0/0:42:1.0:4,4:4-4,4-4:28,8,0,6:4,28:3,6:224.482:326.675,113.385:0.0,0.0:0.0,8.98187e-09,1.0
+chr1	3483580	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3483607;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.919819:19,19:5-20,5-20:18,23,0,8:18,2|19,14|20,2:5,1|6,1|9,1|10,1|14,1|17,2|19,1:371.263:366.612,131.36:6.99379,6.99379:0.0,3.84008e-05,0.999963	0/0:67:0.999998:14,14:14-14,14-14:40,15,0,12:12,3|13,4|14,31|15,2:4,1|5,1|6,4|7,1|8,1|10,1|11,1|13,2:431.313:326.675,113.385:0.19802,0.19802:1.95358e-39,5.81579e-06,0.999995
+chr1	3487177	.	CCATCCATCCAT	.	.	.	END=3487188;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:26,22,0,0:3,26:NULL:300.483:366.612,131.36:0.0,0.0:0.0,8.36725e-08,1.0	0/0:35:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:211.739:326.675,113.385:0.0,0.0:0.0,4.44959e-06,0.999995
+chr1	3487959	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3487988;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.918849:10,12:9-12,12-12:14,17,0,3:9,2|10,3|12,9:8,1|9,1|10,1:257.849:366.612,131.36:1.08161,0.0:1.0,3.86238e-06,1.11061e-21	0/0:33:0.984228:15,15:15-16,15-16:10,16,0,6:15,10:5,1|8,1|12,1|14,2|15,1:242.817:326.675,113.385:0.270063,0.270063:5.38519e-19,0.0034699,0.996541
+chr1	3487988	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATA	.	.	END=3488019;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.758499:10,11:10-14,10-14:4,18,0,0:10,2|11,2:NULL:187.38:366.612,131.36:1.91717,1.5352:0.993196,0.00682201,1.22632e-09	0/0:22:0.944694:16,16:15-17,15-17:9,10,0,0:16,9:NULL:136.375:326.675,113.385:0.4771,0.4771:1.98586e-11,0.0365298,0.963536
+chr1	3490427	.	GCGCGCGCGCGCGC	GCGCGCGCGCGC	.	.	END=3490440;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.0:6,6:6-6,6-6:25,20,0,0:6,25:NULL:282.87:366.612,131.36:0.0990099,0.0990099:1.0,1.37667e-07,2.663e-41	0/0:46:1.0:7,7:7-7,7-7:30,15,0,0:7,30:NULL:258.92:326.675,113.385:0.278639,0.278639:4.9453e-41,1.68511e-08,1.0
+chr1	3491872	.	CACACACACACA	CACACACACA,CACACACACACACACA	.	.	END=3491883;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:18:0.227788:8,8:7-8,7-8:2,15,0,0:8,2:NULL:141.248:366.612,131.36:0.59948,0.59948:2.72633e-08,0.258838,0.741169	1/0:25:0.986961:5,6:5-6,6-6:7,18,0,0:5,2|6,5:NULL:198.102:326.675,113.385:0.452422,0.0:5.90355e-10,0.98821,0.0118178
+chr1	3494930	.	CATTCATTCATTCATTCATTCATT	.	.	.	END=3494953;RU=catt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997386:6,6:6-6,6-6:12,9,0,5:6,12:3,2|4,2|5,1:167.591:366.612,131.36:0.0,0.0:3.95949e-32,0.00131093,0.998694	0/0:47:1.00001:6,6:6-6,6-6:22,15,0,10:6,22:3,4|4,4|5,2:295.517:326.675,113.385:0.0,0.0:0.0,1.17652e-06,1.0
+chr1	3496471	.	TTCTTTTCTTTTCTT	.	.	.	END=3496485;RU=ttctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:260.674:366.612,131.36:0.0,0.0:0.0,5.47066e-07,1.0	0/0:21:0.997268:3,3:1-3,1-3:12,8,0,0:3,12:NULL:120.166:326.675,113.385:0.991682,0.991682:7.039e-42,0.00157585,0.998429
+chr1	3496603	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3496632;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:54:0.283637:22,29:22-22,21-29:15,11,0,25:21,4|22,11:5,1|8,1|9,1|11,1|12,1|13,2|14,1|15,2|16,4|17,4|18,2|19,1|20,2|21,1|27,1:382.349:366.612,131.36:0.0,3.54444:0.0,0.0,1.0	0/0:29:0.984143:15,15:14-16,14-16:16,6,0,6:14,3|15,13:5,1|6,1|9,1|11,2|14,1:177.115:326.675,113.385:0.281439,0.281439:8.76319e-15,0.0152588,0.984773
+chr1	3499569	.	ACCCACCCACCC	ACCCACCCACCCACCCACCC	.	.	END=3499580;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:3:0.00263713:3,5:1-15,1-15:0,3,0,0:NULL:NULL:27.7607:366.612,131.36:5.93652,5.79452:0.00457848,0.154971,0.840537	0/0:18:0.997556:3,3:3-3,3-3:12,6,0,0:3,12:NULL:97.0083:326.675,113.385:0.0,0.0:3.21421e-31,0.00127003,0.998733
+chr1	3507557	.	ACAGACAGACAGACAGACAG	.	.	.	END=3507576;RU=acag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.99109:5,5:4-5,4-5:11,5,0,0:5,11:NULL:87.6499:366.612,131.36:0.437216,0.437216:3.1104e-29,0.00586497,0.99415	0/0:33:0.999946:5,5:5-5,5-5:17,11,0,5:5,17:3,1|4,4:205.65:326.675,113.385:0.0,0.0:1.1e-44,2.35347e-05,0.999979
+chr1	3507759	.	AACAACAACAAC	.	.	.	END=3507770;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999806:4,4:4-4,4-4:16,2,0,0:4,16:NULL:81.2805:366.612,131.36:0.0,0.0:0.0,0.000112515,0.999888	0/0:35:1.0:4,4:4-4,4-4:23,9,0,3:4,23:3,3:195.863:326.675,113.385:0.0,0.0:0.0,3.21403e-07,1.0
+chr1	3509243	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3509290;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:0.901943:24,24:23-25,23-25:20,17,0,15:23,4|24,13|25,3:8,1|11,1|14,2|15,1|17,2|18,1|19,2|21,2|22,1|23,2:377.082:366.612,131.36:0.474835,0.474835:3.69924e-13,0.0100262,0.989998	0/0:35:0.889263:24,24:24-25,24-25:10,11,0,13:23,2|24,8:5,1|7,1|8,1|10,2|13,1|16,1|18,1|19,1|22,1|23,3:253.622:326.675,113.385:0.275098,0.275098:9.72665e-08,0.0958738,0.904227
+chr1	3509605	.	AAACAAAACAAAACA	.	.	.	END=3509619;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999867:3,3:3-3,3-3:16,7,0,0:3,16:NULL:126.671:366.612,131.36:0.0,0.0:0.0,6.98466e-05,0.999933	0/0:19:0.999027:3,3:3-3,3-3:13,6,0,0:3,13:NULL:106.151:326.675,113.385:0.0,0.0:1.49e-43,0.000556877,0.999446
+chr1	3510223	.	AAATAAATAAAT	.	.	.	END=3510234;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:164.508:366.612,131.36:0.0,0.0:0.0,6.1897e-06,0.999995	0/0:28:0.999264:3,3:3-3,3-3:13,12,0,3:3,13:2,3:182.213:326.675,113.385:0.0,0.0:2.11445e-40,0.000337643,0.999666
+chr1	3518996	.	TATTATTATTATTATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTATTATTAT	.	.	END=3519034;RU=tat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.996552:12,12:10-12,10-12:12,10,0,8:12,12:3,1|4,1|7,2|10,3|11,1:200.993:366.612,131.36:0.647134,0.647134:0.998178,0.0018276,7.66627e-17	0/0:27:0.95199:13,13:13-14,13-14:8,10,0,8:13,8:4,1|5,1|6,1|7,1|9,1|11,1|12,2:187.125:326.675,113.385:0.46122,0.46122:2.83563e-14,0.0151482,0.984883
+chr1	3519121	.	ACTCACTCACTC	.	.	.	END=3519132;RU=actc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:219.554:366.612,131.36:0.0,0.0:0.0,7.08751e-07,1.0	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:172.558:326.675,113.385:0.0,0.0:0.0,4.38183e-07,1.0
+chr1	3523067	.	TAATAATAATAATAATAATAATAATAA	TAA	.	.	END=3523093;RU=taa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.039164:1,1:1-5,1-5:0,13,0,0:NULL:NULL:123.852:366.612,131.36:1.14834,1.14834:0.581722,0.376272,0.0421281	0/0:38:0.461444:9,9:9-10,9-10:20,11,0,7:9,17|10,3:5,1|6,1|7,2|8,3:250.211:326.675,113.385:0.499387,0.499387:4.041e-34,3.47245e-06,1.0
+chr1	3527389	.	CATCCATCCATC	.	.	.	END=3527400;RU=catc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:230.582:366.612,131.36:0.0,0.0:0.0,1.79127e-08,1.0	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:317.531:326.675,113.385:0.0,0.0:0.0,1.12177e-10,1.0
+chr1	3529807	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAATAAATAAATAAAT	.	.	END=3529850;RU=aaat;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999979:9,9:9-9,9-9:18,11,0,8:9,18:3,1|4,1|5,1|6,2|8,3:233.364:366.612,131.36:0.0,0.0:0.999993,1.06837e-05,6.47422e-38	0/0:28:0.999428:11,11:11-11,11-11:14,8,0,6:11,14:3,1|5,1|7,1|9,2|10,1:177.812:326.675,113.385:0.0,0.0:4.52009e-32,0.000279724,0.999721
+chr1	3530404	.	TATTATTATTATTATTATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT	.	.	END=3530445;RU=tat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.901029:17,17:17-17,17-17:7,11,0,10:17,7:4,1|7,2|8,1|12,2|13,1|15,2|16,1:203.867:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:42:0.992469:14,14:14-15,14-15:11,18,0,12:14,11:3,2|5,1|6,1|7,3|8,1|11,3|13,1:304.679:326.675,113.385:0.298675,0.298675:2.55207e-16,0.00392428,0.996088
+chr1	3537894	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3537913;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.385014:15,15:13-15,13-15:3,9,0,5:15,3:5,1|7,1|12,2|14,1:137.424:366.612,131.36:0.921165,0.921165:0.0,0.0,1.0	0/0:28:0.975432:10,10:9-11,9-11:15,8,0,4:9,2|10,13:5,1|7,1|8,1|9,1:171.686:326.675,113.385:0.43384,0.43384:2.5878e-18,0.0243184,0.975727
+chr1	3540990	.	TGTTGTTGTTGTTGT	.	.	.	END=3541004;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999861:5,5:5-5,5-5:16,16,0,2:5,16:4,2:226.904:366.612,131.36:0.0,0.0:0.0,7.16376e-05,0.999932	0/0:47:1.0:5,5:5-5,5-5:31,13,0,3:5,31:4,3:261.497:326.675,113.385:0.0,0.0:0.0,1.72273e-09,1.0
+chr1	3541012	.	TTGTTTTTTGTTTTTTGTTTT	TTGTTTTTTGTTTT	.	.	END=3541032;RU=ttgtttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999509:2,2:2-2,2-2:13,13,0,0:2,13:NULL:172.491:366.612,131.36:0.0,0.0:0.999758,0.000244667,2.76786e-40	0/0:40:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:225.609:326.675,113.385:0.0,0.0:0.0,7.44215e-08,1.0
+chr1	3554787	.	GTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGT	.	.	END=3554802;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.999986:9,9:9-9,9-9:18,12,0,7:9,18:6,1|7,2|8,4:237.054:366.612,131.36:0.139319,0.139319:0.0,5.68972e-07,1.0	0/0:49:0.98132:8,8:8-17,8-17:31,13,0,5:8,31:5,1|6,1|7,2|15,1:304.298:326.675,113.385:3.80811,3.80811:0.0,2.92854e-09,1.0
+chr1	3555544	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3555593;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:44:0.362242:21,23:21-21,22-24:8,16,0,19:21,8:5,1|6,1|8,1|10,1|11,1|12,4|13,2|15,3|19,2|22,2|23,1:343.558:366.612,131.36:0.0990099,0.615138:0.636692,0.363356,8.41314e-18	0/3:22:0.260705:25,27:22-25,22-27:2,8,0,10:25,2:8,1|10,2|12,1|13,1|18,1|19,1|22,1|24,1|27,1:166.814:326.675,113.385:1.14218,1.93736:2.32776e-09,0.0255083,0.974539
+chr1	3559181	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=3559216;RU=tc;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.539656:8,8:6-8,6-8:5,17,0,0:8,5:NULL:177.717:366.612,131.36:0.472766,0.472766:1.0,0.0,0.0	0/0:21:0.766734:18,18:16-18,16-18:6,8,0,5:18,6:5,2|12,1|14,1|16,1:138.427:326.675,113.385:0.74567,0.74567:7.06198e-09,0.110577,0.889519
+chr1	3559217	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3559264;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.831844:8,13:8-24,11-24:7,10,0,2:8,3|11,2|13,2:6,1|7,1:146.703:366.612,131.36:6.53897,4.86742:1.0,2.25946e-06,4.52011e-29	0/3:31:0.274637:24,32:24-25,24-33:4,8,0,18:24,4:5,1|7,1|9,2|11,1|12,1|14,3|16,2|19,1|20,2|22,1|23,1|25,1|32,1:237.468:326.675,113.385:0.412766,3.4929:4.38113e-20,9.92807e-07,1.0
+chr1	3559288	.	TCTCTCTCTCTC	.	.	.	END=3559299;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999953:6,6:6-6,6-6:18,12,0,0:6,18:NULL:183.101:366.612,131.36:0.0,0.0:1.7e-44,5.04122e-05,0.999949	0/0:38:0.983739:6,6:6-16,6-16:32,4,0,2:6,32:5,1|14,1:195.327:326.675,113.385:3.76974,3.76974:0.0,1.15641e-09,1.0
+chr1	3560915	.	AAACAAACAAACAAACAAAC	.	.	.	END=3560934;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999839:5,5:5-5,5-5:15,19,0,4:5,15:3,1|4,3:259.872:366.612,131.36:0.0,0.0:0.0,8.33776e-05,0.999918	0/0:39:1.0:5,5:5-5,5-5:23,12,0,4:5,23:4,3|5,1:230.346:326.675,113.385:0.0,0.0:0.0,2.06752e-07,1.0
+chr1	3567195	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3567244;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.815539:25,25:22-25,22-25:9,6,0,9:24,2|25,7:4,1|5,1|10,1|11,2|13,1|16,1|17,1|22,1:170.884:366.612,131.36:1.1105,1.1105:3.3225e-09,0.143123,0.85696	0/1:23:0.573095:25,26:10-25,10-26:6,8,0,7:24,2|25,4:6,1|7,1|8,1|14,1|17,1|21,1|26,1:169.038:326.675,113.385:7.14562,7.63548:2.708e-11,0.0172721,0.982767
+chr1	3568471	.	GATGGATGGATG	.	.	.	END=3568482;RU=gatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999924:3,3:3-3,3-3:16,15,0,2:3,16:2,2:214.124:366.612,131.36:0.0,0.0:0.0,4.05373e-05,0.999963	0/0:34:1.0:3,3:3-3,3-3:25,9,0,0:3,25:NULL:180.427:326.675,113.385:0.0,0.0:0.0,1.92562e-07,1.0
+chr1	3569699	.	GAGGAGGAGGAG	.	.	.	END=3569710;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:23,21,0,0:4,23:NULL:284.952:366.612,131.36:0.0,0.0:0.0,1.6216e-06,1.0	0/0:44:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:247.882:326.675,113.385:0.0990099,0.0990099:0.0,2.60625e-08,1.0
+chr1	3570098	.	CAAAACAAAACAAAA	.	.	.	END=3570112;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:194.924:366.612,131.36:0.0,0.0:0.0,2.27263e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:245.567:326.675,113.385:0.0,0.0:0.0,7.38688e-08,1.0
+chr1	3570893	.	ATATCATATCATATATATCATATCATATATATCATATCATAT	.	.	.	END=3570934;RU=atatcatatcatat;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.984638:3,3:3-3,3-3:10,10,0,0:3,10:NULL:133.018:366.612,131.36:0.0,0.0:1.3946e-12,0.0121244,0.9879	0/0:23:0.994483:3,3:3-3,3-3:11,10,0,2:3,11:2,2:148.089:326.675,113.385:0.0,0.0:7.66727e-14,0.00376926,0.99624
+chr1	3574648	.	CACACACACACACACACACACACA	CACA,CACACACACACACACA	.	.	END=3574671;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.986214:2,8:1-12,3-12:4,32,0,2:2,2|8,2:5,1|7,1:334.309:366.612,131.36:1.82748,2.18962:0.999941,6.0901e-05,4.05663e-13	0/0:48:0.999993:12,12:5-12,5-12:20,21,0,5:12,20:7,1|8,1|9,2|11,1:323.513:326.675,113.385:2.41896,2.41896:2.44051e-28,1.74376e-05,0.999986
+chr1	3575668	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3575713;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.111384:14,22:12-24,22-24:2,20,0,6:22,2:7,2|8,1|9,1|13,1|17,1:240.982:366.612,131.36:5.29045,0.837205:0.887813,0.108392,0.00390201	0/3:60:0.278433:23,28:23-23,22-31:14,24,0,22:22,4|23,10:4,2|5,1|7,2|8,3|9,1|10,1|11,1|12,1|13,3|14,2|15,1|18,1|19,2|28,1:485.687:326.675,113.385:0.0,3.12812:3.576e-14,0.000275774,0.999727
+chr1	3576109	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	ATAGATAGATAGATAG,ATAGATAGATAGATAGATAG	.	.	END=3576152;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.997672:4,5:4-4,4-5:15,21,0,0:4,10|5,5:NULL:273.219:366.612,131.36:0.0,0.390807:1.0,0.0,0.0	0/0:59:1.0:11,11:11-11,11-11:24,18,0,17:11,24:3,4|5,3|6,1|7,1|8,2|9,2|10,4:388.513:326.675,113.385:0.0,0.0:1.17738e-30,7.58134e-07,1.0
+chr1	3576169	.	TAAATAAATAAATAAATAAATAAA	TAAATAAATAAA	.	.	END=3576192;RU=taaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.629186:3,3:3-4,3-4:21,24,0,0:3,19|4,2:NULL:322.466:366.612,131.36:0.491073,0.491073:1.0,1.28293e-06,0.0	0/0:56:1.0:6,6:6-6,6-6:32,18,0,6:6,32:3,2|4,1|5,3:335.677:326.675,113.385:0.0,0.0:0.0,1.09011e-09,1.0
+chr1	3576190	.	AAACAAACAAAC	AAAC	.	.	END=3576201;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0705051:1,1:1-2,1-2:0,20,0,0:NULL:NULL:187.471:366.612,131.36:0.572034,0.572034:0.267009,0.523725,0.209271	0/0:49:1.0:3,3:3-3,3-3:35,14,0,0:3,35:NULL:265.705:326.675,113.385:0.0,0.0:0.0,2.63675e-10,1.0
+chr1	3576505	.	TAGTAGTAGTAGTAGTAGTAGTAGTAG	TAGTAG	.	.	END=3576531;RU=tag;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.325152:2,2:2-8,2-8:3,9,0,0:2,3:NULL:89.3921:366.612,131.36:2.97837,2.97837:0.857414,0.14267,5.98554e-12	0/0:32:1.00001:9,9:9-9,9-9:20,8,0,3:9,20:7,2|8,1:176.424:326.675,113.385:0.139319,0.139319:1.07664e-33,4.93298e-06,0.999995
+chr1	3576606	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=3576674;RU=aga;PERIOD=3;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:18:0.0196081:28,39:12-39,15-40:0,6,0,12:NULL:6,1|8,1|12,4|14,1|18,1|25,2|28,1|37,1:148.215:366.612,131.36:8.12156,7.60409:7.34188e-30,0.228657,0.771374	0/1:30:0.984391:23,24:22-25,23-25:8,12,0,8:23,4|24,4:4,1|10,1|13,1|14,1|15,2|16,1|21,1:207.178:326.675,113.385:0.691512,0.390054:2.67454e-12,0.000776178,0.999226
+chr1	3577214	.	CAATCAATCAAT	.	.	.	END=3577225;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999312:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.142:366.612,131.36:0.0,0.0:0.0,0.000428151,0.999575	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:157.478:326.675,113.385:0.0,0.0:0.0,1.38944e-06,1.0
+chr1	3581254	.	CAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	END=3581273;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.924424:9,9:8-9,8-9:8,8,0,0:9,8:NULL:113.429:366.612,131.36:0.442564,0.442564:0.0,0.0,1.0	0/0:23:0.99584:5,5:5-5,5-5:11,7,0,5:5,11:3,3|4,2:146.225:326.675,113.385:0.0,0.0:2.42381e-38,0.00168218,0.998322
+chr1	3585710	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3585763;RU=ac;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.988159:19,19:19-19,19-19:11,14,0,0:19,11:NULL:180.75:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/2:31:0.294279:27,30:25-27,24-30:6,8,0,15:25,2|27,4:5,1|6,1|11,2|12,1|17,1|19,1|20,2|22,1|23,1|24,2|25,1|30,1:227.254:326.675,113.385:0.839893,2.50693:2.65437e-10,0.000150105,0.99985
+chr1	3588411	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=3588450;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:42:0.404092:18,20:17-18,16-20:14,12,0,16:16,3|17,2|18,9:4,1|5,5|7,1|12,3|13,1|14,2|17,2|20,1:318.935:366.612,131.36:0.275098,1.43157:0.000363908,0.999637,5.75798e-15	2/0:47:0.545097:19,20:18-20,18-20:14,18,0,15:18,3|19,3|20,8:5,1|6,1|7,1|9,1|11,1|13,2|14,3|16,1|17,3|18,1:355.199:326.675,113.385:0.840593,0.339533:7.22038e-07,0.88835,0.111751
+chr1	3589857	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3589900;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.94442:20,20:19-21,19-21:9,10,0,7:20,9:4,1|5,2|7,1|8,2|19,1:191.577:366.612,131.36:0.417958,0.417958:0.984787,0.0152459,6.41648e-11	0/0:35:0.776566:22,22:20-22,20-22:10,10,0,14:21,3|22,7:10,4|12,1|13,1|14,2|15,2|19,3|22,1:252.111:326.675,113.385:0.669325,0.669325:8.57183e-15,0.206472,0.793575
+chr1	3590265	.	ATATATATATATAT	ATATAT	.	.	END=3590278;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999755:3,3:1-3,1-3:15,16,0,0:3,15:NULL:213.737:366.612,131.36:0.851255,0.851255:1.0,0.0,0.0	0/0:32:0.999979:7,7:7-7,7-7:19,12,0,0:7,19:NULL:186.993:326.675,113.385:0.0990099,0.0990099:1.38016e-34,2.74559e-05,0.999972
+chr1	3593993	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3594042;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00116688:2,2:2-12,2-12:0,4,0,0:NULL:NULL:34.3347:366.612,131.36:2.8056,2.8056:0.296546,0.547881,0.155608	0/2:43:0.31823:25,34:24-25,13-34:9,16,0,17:23,2|24,2|25,5:6,2|8,2|9,1|10,1|11,1|17,2|18,1|19,3|24,3|33,1:340.608:326.675,113.385:0.469854,9.1742:2.0047e-08,0.00153837,0.998466
+chr1	3594304	.	TTTGTTTTGTTTTGT	TTTGTTTTGTTTTGTTTTGT	.	.	END=3594318;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999784:4,4:4-4,4-4:15,21,0,5:4,15:2,1|3,4:300.965:366.612,131.36:0.0,0.0:0.0,2.69095e-05,0.999972	0/0:36:0.999996:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.331:326.675,113.385:0.0,0.0:0.0,1.13909e-05,0.999988
+chr1	3595528	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3595547;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999943:6,6:6-6,6-6:17,12,0,6:6,17:2,1|3,2|5,3:219.837:366.612,131.36:0.0,0.0:0.0,7.38434e-06,0.999994	0/0:43:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:3,2|4,4|5,1:263.14:326.675,113.385:0.0,0.0:0.0,2.20549e-07,1.0
+chr1	3597713	.	CCACCCACCCAC	.	.	.	END=3597724;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:26,27,0,0:3,26:NULL:356.282:366.612,131.36:0.0,0.0:0.0,1.9024e-07,1.0	0/0:61:1.0:3,3:3-3,3-3:33,25,0,3:3,33:2,3:380.699:326.675,113.385:0.0,0.0:0.0,3.59453e-10,1.0
+chr1	3598374	.	AGAGAGAGAGAGAG	AG	.	.	END=3598387;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0669496:1,1:1-3,1-3:0,13,0,0:NULL:NULL:121.25:366.612,131.36:0.913899,0.913899:1.0,0.0,0.0	0/0:32:0.999993:7,7:6-7,6-7:19,10,0,2:7,19:4,1|6,1:177.761:326.675,113.385:0.21692,0.21692:0.0,1.1847e-05,0.999987
+chr1	3599536	.	ATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATAT	.	.	END=3599577;RU=at;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.123078:15,15:12-16,12-16:2,6,0,0:15,2:NULL:67.6077:366.612,131.36:1.89137,1.89137:1.0,0.0,0.0	2/2:8:0.155543:20,20:20-22,20-22:2,4,0,0:20,2:NULL:50.4491:326.675,113.385:0.906252,0.906252:0.466256,0.47373,0.060177
+chr1	3599896	.	AAACAAACAAAC	.	.	.	END=3599907;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.998658:3,3:3-4,3-4:13,8,0,0:3,13:NULL:122.393:366.612,131.36:0.46122,0.46122:2.46323e-38,0.000685506,0.999317	0/0:39:1.00001:3,3:3-3,3-3:21,14,0,4:3,21:2,3|3,1:241.059:326.675,113.385:0.0,0.0:0.0,5.51798e-07,1.0
+chr1	3600086	.	ACAAACAAACAAACAAACAA	.	.	.	END=3600105;RU=acaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:5,5:5-5,5-5:20,13,0,6:5,20:4,6:238.826:366.612,131.36:0.0,0.0:0.0,2.78696e-06,1.0	0/0:48:1.0:5,5:5-5,5-5:28,17,0,3:5,28:4,3:294.706:326.675,113.385:0.0,0.0:0.0,9.54704e-09,1.0
+chr1	3608018	.	TTGTTTGTTTGT	.	.	.	END=3608029;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,13,0,5:3,27:2,4|3,1:267.245:366.612,131.36:0.0,0.0:0.0,1.50003e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:36,7,0,0:3,36:NULL:206.438:326.675,113.385:0.0,0.0:0.0,1.14619e-10,1.0
+chr1	3608156	.	TTTGTTTGTTTGTTTG	.	.	.	END=3608171;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:25,15,0,2:4,25:2,1|3,1:249.862:366.612,131.36:0.0,0.0:0.0,3.34792e-07,1.0	0/0:47:1.0:4,4:4-4,4-4:25,16,0,6:4,25:3,6:283.617:326.675,113.385:0.0,0.0:0.0,9.75639e-08,1.0
+chr1	3610003	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3610046;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.646453:23,23:22-24,22-24:14,12,0,16:22,4|23,10:5,1|6,2|7,2|9,2|15,2|16,1|17,2|20,3|22,1:307.269:366.612,131.36:0.451337,0.451337:1.95176e-26,0.000370915,0.99963	0/0:52:0.999485:22,22:22-22,22-22:16,16,0,19:22,16:5,1|6,1|8,1|9,2|10,1|11,2|12,1|13,1|15,1|16,2|17,2|19,2|21,1|22,1:373.435:326.675,113.385:0.0,0.0:9.25308e-26,9.79314e-05,0.999903
+chr1	3612774	.	AAAGAAAGAAAGAAAG	.	.	.	END=3612789;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.210875:4,4:1-4,1-4:2,10,0,0:4,2:NULL:94.1995:366.612,131.36:1.38593,1.38593:2.8758e-07,0.546696,0.453414	0/0:49:1.0:4,4:4-4,4-4:26,19,0,4:4,26:3,4:315.785:326.675,113.385:0.0,0.0:0.0,7.2981e-08,1.0
+chr1	3613442	.	CTGCTGCTGCTG	.	.	.	END=3613453;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.999998:4,4:4-5,4-5:20,30,0,0:4,20:NULL:345.283:366.612,131.36:0.236383,0.236383:0.0,1.51018e-05,0.999986	0/0:54:1.0:4,4:4-4,4-4:37,17,0,0:4,37:NULL:294.658:326.675,113.385:0.0,0.0:0.0,9.79091e-11,1.0
+chr1	3630160	.	AATTAATTAATT	.	.	.	END=3630171;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999879:3,3:3-3,3-3:16,13,0,0:3,16:NULL:181.582:366.612,131.36:0.0,0.0:0.0,8.50016e-05,0.999917	0/0:23:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:109.798:326.675,113.385:0.0,0.0:0.0,8.58725e-06,0.999994
+chr1	3631051	.	ATTAATTAATTA	.	.	.	END=3631062;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998978:3,3:3-3,3-3:15,25,0,0:3,15:NULL:289.134:366.612,131.36:0.0,0.0:0.0,0.000866248,0.999135	0/0:37:1.00001:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.256:326.675,113.385:0.0,0.0:0.0,5.80739e-07,1.0
+chr1	3638662	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=3638693;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.999957:6,6:6-6,6-6:17,25,0,4:6,17:3,2|5,2:331.039:366.612,131.36:0.0,0.0:0.999995,5.32595e-06,0.0	0/0:65:1.0:8,8:8-8,8-8:24,26,0,15:8,24:2,2|3,1|4,3|5,2|6,1|7,6:454.389:326.675,113.385:0.0,0.0:0.0,3.53291e-07,1.0
+chr1	3639042	.	AAGAAAGAAAGA	.	.	.	END=3639053;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,13,0,3:3,25:2,3:236.707:366.612,131.36:0.0,0.0:0.0,5.6034e-08,1.0	0/0:63:1.0:3,3:3-3,3-3:48,15,0,0:3,48:NULL:321.101:326.675,113.385:0.0,0.0:0.0,1.76623e-14,1.0
+chr1	3649526	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3649573;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.837773:21,21:20-21,20-21:6,20,0,16:21,6:5,1|6,1|7,2|12,2|13,2|14,2|15,2|16,1|19,2|20,1:340.528:366.612,131.36:0.298675,0.298675:0.986037,0.0139951,1.83348e-12	0/0:29:0.862321:24,24:23-24,23-24:7,9,0,12:24,7:5,1|6,1|8,1|9,1|10,1|12,1|14,1|15,1|19,3|21,1:206.345:326.675,113.385:0.253975,0.253975:3.65728e-09,0.0713484,0.928746
+chr1	3650739	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=3650782;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.998517:15,15:11-15,11-15:20,10,0,5:14,3|15,17:9,4|10,1:222.223:366.612,131.36:1.16277,1.16277:1.0,0.0,0.0	0/0:60:0.808444:22,22:19-22,19-22:17,13,0,28:21,5|22,12:4,2|5,1|7,1|8,5|9,2|10,3|13,2|14,1|16,2|17,1|18,2|19,1|20,1|21,3|22,1:426.994:326.675,113.385:0.695329,0.695329:1.83475e-18,0.191368,0.808688
+chr1	3651177	.	AAGGAAGGAAGG	.	.	.	END=3651188;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:219.182:366.612,131.36:0.0,0.0:0.0,2.11714e-06,1.0	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.048:326.675,113.385:0.0,0.0:0.0,7.46354e-08,1.0
+chr1	3652162	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3652195;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.916268:17,17:16-17,16-17:16,21,0,5:16,4|17,12:8,1|9,1|12,1|14,2:316.434:366.612,131.36:0.382696,0.382696:1.15124e-12,0.0835824,0.916516	0/0:23:0.752574:17,17:16-17,16-17:11,9,0,3:16,3|17,8:9,2|15,1:160.628:326.675,113.385:0.412766,0.412766:1.17992e-08,0.24142,0.758596
+chr1	3652198	.	ATGTATGTATGT	.	.	.	END=3652209;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:252.979:366.612,131.36:0.0,0.0:0.0,2.25692e-06,1.0	0/0:21:0.999242:3,3:3-3,3-3:14,7,0,0:3,14:NULL:121.301:326.675,113.385:0.0,0.0:1.08e-42,0.000431677,0.999569
+chr1	3652267	.	ATTTATTTATTT	.	.	.	END=3652278;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:221.678:366.612,131.36:0.0,0.0:0.0,5.64366e-06,0.999995	0/0:24:0.999819:3,3:3-3,3-3:16,8,0,0:3,16:NULL:137.147:326.675,113.385:0.0,0.0:0.0,0.000102968,0.999896
+chr1	3653461	.	GTGGGTGGGTGG	.	.	.	END=3653472;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,27,0,0:3,29:NULL:360.913:366.612,131.36:0.0,0.0:0.0,5.32789e-08,1.0	0/0:25:0.999931:3,3:3-3,3-3:17,8,0,0:3,17:NULL:136.47:326.675,113.385:0.0,0.0:0.0,3.93278e-05,0.999963
+chr1	3655005	.	ATAAATAAATAAATAAATAAATAA	.	.	.	END=3655028;RU=ataa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999914:6,6:6-6,6-6:17,11,0,0:6,17:NULL:169.944:366.612,131.36:0.0,0.0:0.0,6.7504e-05,0.999933	0/0:22:0.999:6,6:6-6,6-6:13,7,0,2:6,13:5,2:129.011:326.675,113.385:0.0,0.0:8.21165e-40,0.000428176,0.999575
+chr1	3658217	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3658262;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.402513:28,28:27-28,27-28:6,11,0,12:27,2|28,4:6,3|9,1|10,1|17,1|18,1|22,1|23,1|24,2|27,1:222.141:366.612,131.36:0.478946,0.478946:0.0,0.0,1.0	0/0:35:0.928376:23,23:21-24,21-24:11,8,0,14:22,2|23,9:5,1|8,1|10,2|14,2|16,1|19,2|20,2|22,3:236.441:326.675,113.385:0.507951,0.507951:9.4495e-09,0.0600128,0.940076
+chr1	3658997	.	TAAAATAAAATAAAA	.	.	.	END=3659011;RU=taaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:243.445:366.612,131.36:0.0,0.0:0.0,2.70447e-07,1.0	0/0:31:0.993071:3,3:3-3,3-3:10,19,0,2:3,10:2,2:238.715:326.675,113.385:0.0,0.0:7.02703e-33,0.00430459,0.995704
+chr1	3659687	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3659732;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.525084:21,21:17-23,17-23:16,12,0,14:19,2|20,4|21,10:8,4|9,1|10,2|12,1|13,2|14,2|16,1|19,1:310.77:366.612,131.36:0.992275,0.992275:0.999879,0.000123886,3.17682e-17	0/0:50:0.973781:23,23:14-23,14-23:10,17,0,20:23,10:4,1|5,1|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,2|18,1|20,1|21,1:361.452:326.675,113.385:4.1361,4.1361:2.24582e-11,0.0119948,0.988032
+chr1	3660735	.	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=3660759;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.998797:5,5:5-5,5-5:12,21,0,9:5,12:3,6|4,2|5,1:312.548:366.612,131.36:0.0,0.0:0.0,0.000756779,0.999248	0/0:35:1.0:5,5:5-5,5-5:23,7,0,5:5,23:3,1|4,4:194.246:326.675,113.385:0.0,0.0:0.0,3.25399e-07,1.0
+chr1	3661144	.	TGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG	.	.	END=3661161;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:1.0:11,11:11-11,11-11:36,20,0,7:10,3|11,33:4,1|5,2|6,1|7,1|9,1|10,1:390.389:366.612,131.36:0.0,0.0:0.0,4.32167e-11,1.0	0/0:37:1.0:9,9:9-9,9-9:20,11,0,4:9,20:5,1|6,1|8,1|9,1:215.734:326.675,113.385:0.0,0.0:1.8807e-38,4.27597e-06,0.999995
+chr1	3667713	.	AACAAACAAACA	.	.	.	END=3667724;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:231.239:366.612,131.36:0.0,0.0:0.0,4.28522e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:192.588:326.675,113.385:0.0,0.0:0.0,4.54549e-06,0.999995
+chr1	3671145	.	GCAGCAGCAGCAGCA	.	.	.	END=3671159;RU=gca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:5,5:5-5,5-5:33,28,0,0:4,2|5,31:NULL:397.821:366.612,131.36:0.0990099,0.0990099:0.0,8.92102e-07,1.0	0/0:41:1.0:5,5:5-5,5-5:21,18,0,2:5,21:3,1|4,1:268.021:326.675,113.385:0.0,0.0:0.0,4.46015e-06,0.999995
+chr1	3671658	.	GCCGCCGCCGCCGCC	.	.	.	END=3671672;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:23,21,0,0:5,23:NULL:285.729:366.612,131.36:0.0,0.0:0.0,1.51329e-06,1.0	0/0:80:1.0:5,5:5-5,5-5:45,33,0,2:5,45:4,2:511.722:326.675,113.385:0.0,0.0:0.0,2.72444e-13,1.0
+chr1	3672852	.	CACCACCACCAC	CAC	.	.	END=3672863;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0545822:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.243:366.612,131.36:0.623212,0.623212:0.349383,0.488596,0.162064	0/0:6:0.242123:4,4:1-4,1-4:2,4,0,0:4,2:NULL:41.7069:326.675,113.385:0.857222,0.857222:4.36802e-06,0.405199,0.59487
+chr1	3673065	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	END=3673124;RU=cttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.48575:18,18:17-18,17-18:3,10,0,6:18,3:2,1|5,1|7,1|8,1|12,1|17,1:156.234:366.612,131.36:0.478946,0.478946:2.14036e-22,0.0868164,0.91328	0/0:20:0.66215:15,15:13-15,13-15:5,10,0,5:15,5:3,1|5,1|7,1|10,1|13,1:152.866:326.675,113.385:0.404368,0.404368:4.1154e-10,0.210486,0.789562
+chr1	3673125	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3673174;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.109:18,18:15-19,15-19:2,10,0,0:18,2:NULL:106.067:366.612,131.36:1.60555,1.60555:1.0,0.0,0.0	2/2:20:0.0214122:24,24:23-26,23-26:0,10,0,6:NULL:5,1|6,1|12,1|16,1|21,1|24,1:143.116:326.675,113.385:1.0234,1.0234:0.120437,0.554704,0.325002
+chr1	3677305	.	AGAGAGAGAGAG	.	.	.	END=3677316;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:6,6:6-6,6-6:23,20,0,0:6,23:NULL:282.976:366.612,131.36:0.0,0.0:0.0,1.29706e-06,1.0	0/0:36:1.0:6,6:6-6,6-6:24,10,0,2:6,24:5,2:207.0:326.675,113.385:0.0,0.0:0.0,1.97072e-07,1.0
+chr1	3679100	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=3679119;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999952:4,4:4-4,4-4:17,14,0,3:4,17:2,1|3,2:216.889:366.612,131.36:0.0,0.0:0.999971,3.05182e-05,8.95878e-40	0/0:36:1.0:5,5:5-5,5-5:26,7,0,3:5,26:4,3:191.379:326.675,113.385:0.0,0.0:0.0,4.85084e-08,1.0
+chr1	3680409	.	TTTTGTTTTGTTTTG	.	.	.	END=3680423;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999047:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.587:366.612,131.36:0.0,0.0:2.2255e-41,0.000601739,0.999401	0/0:39:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:227.682:326.675,113.385:0.0,0.0:0.0,2.28936e-07,1.0
+chr1	3681094	.	TCTATCTATCTA	.	.	.	END=3681105;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999866:3,3:3-3,3-3:16,8,0,0:3,16:NULL:135.989:366.612,131.36:0.0,0.0:0.0,8.57214e-05,0.999917	0/0:48:1.0:3,3:3-3,3-3:32,13,0,3:3,32:2,3:264.039:326.675,113.385:0.0,0.0:0.0,8.76106e-10,1.0
+chr1	3686501	.	TATATATATATATATATATATATATATATATATATATA	TA	.	.	END=3686538;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0184747:1,1:1-4,1-4:0,23,0,0:NULL:NULL:207.554:366.612,131.36:0.993953,0.993953:0.873247,0.124515,0.00234243	0/0:13:0.782299:19,19:19-19,19-19:6,7,0,0:19,6:NULL:88.745:326.675,113.385:0.417958,0.417958:3.40388e-08,0.123674,0.876425
+chr1	3688514	.	AAACAAACAAACAAAC	.	.	.	END=3688529;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999971:4,4:4-4,4-4:17,13,0,2:4,17:3,2:208.339:366.612,131.36:0.0,0.0:0.0,2.13281e-05,0.999979	0/0:29:0.999821:4,4:4-4,4-4:17,12,0,0:4,17:NULL:183.456:326.675,113.385:0.0,0.0:0.0,0.00014699,0.999856
+chr1	3689585	.	GTGGGTGGGTGGGTGG	.	.	.	END=3689600;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.846048:4,4:2-4,2-4:6,25,0,2:4,6:2,1|3,1:254.143:366.612,131.36:0.485452,0.485452:1.57694e-16,0.0988066,0.901298	0/0:40:0.980853:4,4:4-4,4-4:9,28,0,3:4,9:3,3:307.763:326.675,113.385:0.0,0.0:1.30993e-24,0.0128877,0.987141
+chr1	3693848	.	TCTCTGTCTCTGTCTCTG	.	.	.	END=3693865;RU=tctctg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:224.771:366.612,131.36:0.0,0.0:0.0,4.71796e-07,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:201.695:326.675,113.385:0.0,0.0:0.0,1.96197e-06,1.0
+chr1	3693870	.	TGTGTGTGTGTGTG	.	.	.	END=3693883;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:7,7:7-7,7-7:20,10,0,2:7,20:4,1|6,1:186.249:366.612,131.36:0.0,0.0:6.01707e-37,5.85978e-06,0.999995	0/0:30:0.999913:7,7:7-8,7-8:17,8,0,3:7,17:6,3:159.633:326.675,113.385:0.261581,0.261581:1.32769e-31,2.84845e-05,0.999972
+chr1	3695906	.	TTTTATTTTATTTTA	TTTTATTTTATTTTATTTTA	.	.	END=3695920;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.977606:4,4:4-4,4-4:9,10,0,2:4,9:3,2:143.282:366.612,131.36:0.0,0.0:0.0,0.00535545,0.994656	0/0:28:0.999485:3,3:3-3,3-3:14,12,0,2:3,14:2,2:185.671:326.675,113.385:0.0,0.0:1.2918e-40,0.000265004,0.999736
+chr1	3699904	.	CTTTCTTTCTTT	.	.	.	END=3699915;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997682:3,3:3-3,3-3:13,13,0,0:3,13:NULL:177.632:366.612,131.36:0.0,0.0:3.5e-43,0.00138937,0.998617	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:175.035:326.675,113.385:0.0,0.0:0.0,3.71979e-07,1.0
+chr1	3700824	.	CATCATCATCAT	.	.	.	END=3700835;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:24,21,0,4:4,24:3,4:317.857:366.612,131.36:0.0,0.0:0.0,3.12785e-07,1.0	0/0:66:1.0:4,4:4-4,4-4:47,15,0,4:4,47:3,4:350.769:326.675,113.385:0.0,0.0:0.0,3.01842e-14,1.0
+chr1	3702280	.	AAATAAATAAAT	.	.	.	END=3702291;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:24,15,0,2:3,24:2,2:246.834:366.612,131.36:0.0,0.0:0.0,6.36609e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.624:326.675,113.385:0.0,0.0:0.0,2.31843e-06,1.0
+chr1	3702293	.	AAATAAAATAAAATA	.	.	.	END=3702307;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:226.913:366.612,131.36:0.0,0.0:0.0,1.69776e-06,1.0	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:143.124:326.675,113.385:0.0,0.0:0.0,9.21183e-06,0.999993
+chr1	3708462	.	GAGAGAGAGAGAGA	GAGAGAGAGA	.	.	END=3708475;RU=ga;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.00667709:5,5:1-6,1-6:0,9,0,0:NULL:NULL:84.5076:366.612,131.36:1.98272,1.98272:0.147395,0.516524,0.336216	0/0:28:0.999898:7,7:7-7,7-7:17,7,0,3:7,17:4,1|5,1|6,1:157.139:326.675,113.385:0.0990099,0.0990099:1.44551e-31,3.82113e-05,0.999963
+chr1	3712175	.	ACACACACACACACACACACACACACAC	ACACACACACACACAC	.	.	END=3712202;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.723808:8,8:7-11,7-11:5,16,0,4:8,5:6,2|7,1|8,1:197.448:366.612,131.36:1.37592,1.37592:0.976772,0.0232742,1.39106e-16	0/0:38:0.866293:14,14:13-16,13-16:15,14,0,7:13,3|14,12:6,1|7,1|9,2|10,1|12,1|13,1:256.427:326.675,113.385:0.696456,0.696456:1.35313e-13,0.133089,0.867002
+chr1	3712203	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=3712260;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0579816:30,32:30-33,30-33:0,12,0,7:NULL:5,1|7,1|8,3|11,1|15,1:169.773:366.612,131.36:1.06793,1.04894:0.0,0.0,1.0	0/0:41:0.954639:29,29:24-30,24-30:11,12,0,14:28,2|29,9:5,1|6,1|7,1|13,1|14,1|15,1|16,1|18,1|19,1|20,2|21,1|24,1|29,1:276.241:326.675,113.385:1.67885,1.67885:5.44121e-18,0.0265952,0.973455
+chr1	3719601	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3719644;RU=ag;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:19:0.0347453:30,33:10-32,10-32:0,9,0,8:NULL:13,1|14,1|19,1|20,1|22,1|26,1|28,1|30,1:149.785:366.612,131.36:9.11023,9.18537:1.2421e-29,0.214365,0.785679	0/1:38:0.465736:22,25:21-22,20-25:16,11,0,11:20,5|21,3|22,8:7,1|10,2|14,2|15,2|20,1|21,1|24,1|25,1:285.322:326.675,113.385:0.358902,1.23703:2.13583e-17,1.41103e-05,0.999987
+chr1	3719848	.	CCAGCCAGCCAG	.	.	.	END=3719859;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:216.479:366.612,131.36:0.0,0.0:0.0,8.62623e-07,1.0	0/0:46:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:288.791:326.675,113.385:0.0,0.0:0.0,1.16681e-07,1.0
+chr1	3720011	.	GTGGTGGTGGTG	.	.	.	END=3720022;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:25,15,0,0:4,25:NULL:234.32:366.612,131.36:0.0,0.0:0.0,2.50935e-07,1.0	0/0:47:1.0:4,4:4-4,4-4:35,12,0,0:4,35:NULL:254.334:326.675,113.385:0.0,0.0:0.0,2.74008e-10,1.0
+chr1	3722193	.	CACCACCACCAC	.	.	.	END=3722204;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999986:4,4:4-4,4-4:19,20,0,0:4,19:NULL:255.587:366.612,131.36:0.0,0.0:0.0,2.0731e-05,0.999979	0/0:36:0.999995:4,4:4-4,4-4:20,16,0,0:4,20:NULL:226.869:326.675,113.385:0.0,0.0:0.0,1.35846e-05,0.999987
+chr1	3724786	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3724835;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.920241:8,8:7-8,7-8:11,6,0,0:7,2|8,9:NULL:107.946:366.612,131.36:0.311527,0.311527:1.0,0.0,0.0	0/2:64:0.88837:25,27:13-26,13-27:13,28,0,22:23,2|25,8|26,3:5,1|7,3|9,1|12,2|13,2|14,1|15,2|16,1|19,2|20,1|22,1|23,1|24,3|27,1:510.895:326.675,113.385:3.432,4.39533:6.1595e-17,1.69852e-07,1.0
+chr1	3724835	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG	.	.	END=3724868;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.704735:7,7:6-19,6-19:14,10,0,0:6,2|7,12:NULL:156.457:366.612,131.36:5.39532,5.39532:0.999773,0.000228516,0.0	0/0:70:1.0:17,17:8-17,8-17:27,26,0,15:17,27:4,2|5,2|7,1|8,4|9,1|13,1|14,3|15,1:469.515:326.675,113.385:2.68881,2.68881:0.0,8.94391e-08,1.0
+chr1	3726870	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	END=3726905;RU=cttc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.995342:6,7:6-9,7-9:6,5,0,0:6,2|7,4:NULL:80.5326:366.612,131.36:1.26508,0.526896:0.999614,0.000386882,3.11278e-14	0/0:21:0.670658:9,9:9-9,9-9:5,13,0,3:9,5:3,1|6,2:160.314:326.675,113.385:0.19802,0.19802:7.56913e-10,0.260988,0.739012
+chr1	3727052	.	CCACCCACCCAC	.	.	.	END=3727063;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999387:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.249:366.612,131.36:0.0,0.0:0.0,0.000337427,0.999666	0/0:44:1.0:3,3:3-3,3-3:31,9,0,4:3,31:2,3|3,1:231.54:326.675,113.385:0.0,0.0:0.0,5.74388e-10,1.0
+chr1	3727955	.	CACACACACACA	CACACA,CACACACACA	.	.	END=3727966;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:13:0.523675:5,5:5-6,5-6:4,8,0,0:5,4:NULL:88.9008:366.612,131.36:0.605662,0.605662:0.794176,0.205873,4.81081e-08	1/0:29:0.323451:3,6:3-6,3-6:2,27,0,0:6,2:NULL:249.758:326.675,113.385:1.38061,1.03663:9.28477e-05,0.665603,0.334317
+chr1	3730566	.	ATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3730609;RU=at;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:5:0.0242636:23,23:23-27,23-27:0,3,0,0:NULL:NULL:27.3808:366.612,131.36:1.10572,1.10572:0.0,0.0,1.0	1/1:11:0.167736:21,21:17-21,17-21:2,8,0,0:21,2:NULL:84.4048:326.675,113.385:1.1439,1.1439:0.620722,0.34227,0.0370962
+chr1	3730917	.	AAAATAAAATAAAAT	.	.	.	END=3730931;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99712:3,3:3-3,3-3:12,10,0,0:3,12:NULL:138.177:366.612,131.36:0.0,0.0:1.15463e-39,0.0017405,0.998262	0/0:24:0.999991:3,3:3-3,3-3:18,6,0,0:3,18:NULL:128.579:326.675,113.385:0.0,0.0:0.0,1.8288e-05,0.999985
+chr1	3732771	.	ACAAACAAACAAACAA	.	.	.	END=3732786;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:20,9,0,0:4,20:NULL:159.888:366.612,131.36:0.0,0.0:0.0,6.7041e-06,0.999994	0/0:52:1.0:4,4:4-4,4-4:37,12,0,3:4,37:3,3:281.16:326.675,113.385:0.0,0.0:0.0,2.69868e-11,1.0
+chr1	3733827	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3733846;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999765:6,6:6-6,6-6:15,13,0,6:6,15:3,2|4,1|5,3:218.421:366.612,131.36:0.0,0.0:0.0,2.32535e-05,0.999979	0/0:42:1.0:5,5:5-5,5-5:20,18,0,4:5,20:3,1|4,3:274.694:326.675,113.385:0.0,0.0:0.0,4.27277e-06,0.999995
+chr1	3733847	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3733864;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999818:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.606:366.612,131.36:0.0,0.0:0.0,0.000105411,0.999895	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:221.582:326.675,113.385:0.0,0.0:0.0,4.92952e-06,0.999995
+chr1	3742835	.	ACATACATACAT	.	.	.	END=3742846;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.131:366.612,131.36:0.0,0.0:0.0,2.71881e-07,1.0	0/0:23:0.999756:3,3:3-3,3-3:15,6,0,2:3,15:2,2:128.457:326.675,113.385:0.0,0.0:0.0,0.000104244,0.999896
+chr1	3744407	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	END=3744462;RU=ggaa;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.993983:11,11:11-11,11-11:11,3,0,6:11,11:3,1|5,1|7,2|8,1|9,1:116.828:366.612,131.36:0.0,0.0:0.999066,0.000937214,5.358e-29	0/0:35:0.994739:14,14:14-14,14-14:11,13,0,11:14,11:3,1|4,2|5,1|7,2|8,2|11,1|12,2:247.076:326.675,113.385:0.0,0.0:3.08675e-25,0.00330763,0.996701
+chr1	3745050	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAG	.	.	END=3745103;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.00833439:3,3:2-5,2-5:0,11,0,0:NULL:NULL:95.702:366.612,131.36:0.85137,0.85137:0.805952,0.189878,0.00422831	0/0:28:0.811515:27,27:23-27,23-27:6,13,0,7:27,6:11,1|17,2|19,1|23,1|26,2:200.791:326.675,113.385:1.59366,1.59366:2.83126e-07,0.0964777,0.903624
+chr1	3752086	.	GTGTGTGTGTGT	.	.	.	END=3752097;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999816:6,6:6-6,6-6:16,7,0,0:6,16:NULL:130.022:366.612,131.36:0.0,0.0:2.15979e-39,0.000115849,0.999887	0/0:39:1.00001:6,6:6-6,6-6:21,15,0,2:6,21:5,2:235.47:326.675,113.385:0.139319,0.139319:0.0,2.68487e-06,1.0
+chr1	3758404	.	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	AAACAAAACAAAACAAAACAAAACAAAACAAAACA	.	.	END=3758448;RU=aaaca;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.996019:7,7:7-7,7-7:11,11,0,3:7,11:3,1|5,1|6,1:166.028:366.612,131.36:0.0,0.0:0.998838,0.00116594,1.13138e-28	0/0:28:0.99793:9,9:9-9,9-9:12,9,0,7:9,12:5,3|7,1|8,3:176.998:326.675,113.385:0.0,0.0:2.98334e-31,0.00078847,0.999217
+chr1	3765019	.	ATTTATTTATTT	.	.	.	END=3765030;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999994:3,3:3-3,3-3:19,15,0,0:3,19:NULL:207.901:366.612,131.36:0.0,0.0:0.0,1.32469e-05,0.999987	0/0:28:0.999971:3,3:3-3,3-3:18,10,0,0:3,18:NULL:156.196:326.675,113.385:0.0,0.0:0.0,2.37635e-05,0.999979
+chr1	3766121	.	ACCCACCCACCC	.	.	.	END=3766132;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.963733:3,3:3-3,3-3:7,15,0,0:3,7:NULL:162.987:366.612,131.36:0.0,0.0:4.39709e-22,0.0207749,0.979265	0/0:30:0.981572:3,3:3-3,3-3:9,21,0,0:3,9:NULL:219.913:326.675,113.385:0.0,0.0:9.73776e-28,0.0135567,0.986474
+chr1	3774612	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3774657;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.861539:19,19:18-19,18-19:13,9,0,10:18,3|19,10:7,2|10,1|13,1|14,2|15,2|17,1|18,1:225.995:366.612,131.36:0.35561,0.35561:1.0,0.0,0.0	0/2:51:0.766394:23,24:21-23,17-25:16,13,0,19:21,2|22,3|23,11:5,2|8,1|9,3|11,3|13,1|14,5|21,1|22,1|23,1|24,1:364.47:326.675,113.385:0.893506,2.31438:9.02236e-21,4.32181e-05,0.999957
+chr1	3779502	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3779519;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.978872:3,3:3-3,3-3:9,9,0,0:3,9:NULL:117.204:366.612,131.36:0.0,0.0:9.67506e-30,0.0137041,0.986326	0/0:23:0.996225:3,3:3-3,3-3:11,10,0,2:3,11:2,2:146.011:326.675,113.385:0.0,0.0:4.10704e-36,0.00189986,0.998108
+chr1	3784264	.	TTTATTTATTTA	.	.	.	END=3784275;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:224.825:366.612,131.36:0.0,0.0:0.0,3.24046e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:196.026:326.675,113.385:0.0,0.0:0.0,4.68302e-07,1.0
+chr1	3785257	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3785292;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.796789:23,24:21-25,24-25:10,9,0,20:23,4|24,6:4,2|5,2|6,1|9,1|10,2|11,2|15,1|16,2|17,1|18,4|22,1|23,1:290.161:366.612,131.36:0.845709,0.242928:0.0,0.0,1.0	0/0:34:0.999161:18,18:18-18,18-18:16,9,0,7:18,16:6,2|10,1|11,2|13,1|16,1:210.872:326.675,113.385:0.0,0.0:1.9113e-20,0.000261504,0.999742
+chr1	3786174	.	TTTATTTATTTA	.	.	.	END=3786185;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:169.623:366.612,131.36:0.0,0.0:0.0,2.02586e-06,1.0	0/0:26:0.999919:3,3:3-3,3-3:17,9,0,0:3,17:NULL:151.107:326.675,113.385:0.0,0.0:0.0,6.01705e-05,0.999941
+chr1	3786490	.	TAAATAAATAAA	.	.	.	END=3786501;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:23,5,0,0:3,23:NULL:139.261:366.612,131.36:0.0,0.0:0.0,4.1567e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:185.487:326.675,113.385:0.0,0.0:0.0,1.83393e-08,1.0
+chr1	3788152	.	CATACATACATA	.	.	.	END=3788163;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999885:3,3:3-3,3-3:16,19,0,0:3,16:NULL:237.894:366.612,131.36:0.0,0.0:0.0,8.15691e-05,0.999919	0/0:33:0.999993:3,3:3-3,3-3:18,10,0,5:3,18:2,5:200.301:326.675,113.385:0.0,0.0:0.0,1.22226e-05,0.999987
+chr1	3788588	.	CTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCC	.	.	.	END=3788627;RU=ctctctcc;PERIOD=8;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.645137:5,5:2-5,2-5:5,11,0,0:5,5:NULL:123.911:366.612,131.36:0.675883,0.675883:1.07449e-14,0.312121,0.68789	0/0:18:0.887773:5,5:5-5,5-5:6,9,0,3:5,6:2,1|4,2:124.338:326.675,113.385:0.29703,0.29703:5.95352e-18,0.0705128,0.929582
+chr1	3789797	.	AATAAATAAATA	.	.	.	END=3789808;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.998953:3,3:3-3,3-3:14,6,0,0:3,14:NULL:115.25:366.612,131.36:0.0,0.0:0.0,0.000634039,0.99937	0/0:21:0.999822:3,3:3-3,3-3:16,5,0,0:3,16:NULL:110.646:326.675,113.385:0.0,0.0:0.0,9.87633e-05,0.999903
+chr1	3805050	.	TTGGTTGGTTGG	TTGGTTGG	.	.	END=3805061;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0810857:2,2:1-3,1-3:0,19,0,0:NULL:NULL:190.732:366.612,131.36:0.651813,0.651813:0.251698,0.520872,0.227449	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:231.613:326.675,113.385:0.0,0.0:0.0,7.69771e-08,1.0
+chr1	3805151	.	CTGCCTCTGCCTCTGCCTCTGCCT	CTGCCT,CTGCCTCTGCCT	.	.	END=3805174;RU=ctgcct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:19:0.268599:1,2:1-2,1-2:0,19,0,0:NULL:NULL:189.234:366.612,131.36:0.573574,0.493065:0.660386,0.313909,0.0257531	0/0:40:1.0:4,4:4-4,4-4:25,12,0,3:4,25:3,3:229.306:326.675,113.385:0.0,0.0:0.0,1.29196e-07,1.0
+chr1	3805421	.	ACCCACCCACCC	.	.	.	END=3805432;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.45434:3,3:2-3,2-3:3,5,0,0:3,3:NULL:53.6259:366.612,131.36:0.222277,0.222277:2.34056e-09,0.235506,0.764519	0/0:17:0.933602:3,3:3-3,3-3:7,10,0,0:3,7:NULL:114.943:326.675,113.385:0.0,0.0:2.59369e-20,0.0362776,0.96379
+chr1	3808366	.	TTGTTTGTTTGT	.	.	.	END=3808377;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999908:3,3:3-3,3-3:17,26,0,0:3,17:NULL:306.492:366.612,131.36:0.0,0.0:0.0,7.48206e-05,0.999926	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:166.117:326.675,113.385:0.0,0.0:0.0,5.45415e-06,0.999995
+chr1	3820046	.	ATACATACATAC	.	.	.	END=3820057;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:284.425:366.612,131.36:0.0,0.0:0.0,2.20899e-07,1.0	0/0:20:0.998942:3,3:3-3,3-3:13,5,0,2:3,13:2,2:109.567:326.675,113.385:0.0,0.0:1.1e-44,0.000421401,0.999583
+chr1	3820489	.	GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	GAAGA	.	.	END=3820553;RU=gaaga;PERIOD=5;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0470469:1,1:1-3,1-3:0,12,0,0:NULL:NULL:107.696:366.612,131.36:0.738802,0.738802:0.881235,0.117651,0.00121683	0/0:20:0.495419:13,13:11-13,11-13:3,13,0,4:13,3:6,1|11,2|12,1:162.65:326.675,113.385:0.634282,0.634282:1.54106e-06,0.353491,0.646549
+chr1	3821324	.	ATGAAATGAAATGAA	.	.	.	END=3821338;RU=atgaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:193.08:366.612,131.36:0.0,0.0:0.0,2.98735e-07,1.0	0/0:30:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:162.026:326.675,113.385:0.0,0.0:0.0,2.89903e-06,1.0
+chr1	3821877	.	AATAAATAAATA	.	.	.	END=3821888;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:209.292:366.612,131.36:0.0,0.0:0.0,3.26394e-06,1.0	0/0:24:0.999983:3,3:3-3,3-3:18,6,0,0:3,18:NULL:123.511:326.675,113.385:0.0,0.0:0.0,2.01864e-05,0.99998
+chr1	3824596	.	GGGTGGGTGGGT	.	.	.	END=3824607;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.270275:3,3:3-5,3-5:2,6,0,0:3,2:NULL:60.4922:366.612,131.36:0.557805,0.557805:1.71077e-06,0.273652,0.726351	0/0:23:0.985127:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.238:326.675,113.385:0.0,0.0:2.41429e-25,0.00757214,0.992446
+chr1	3830973	.	TGGCTGGCTGGC	.	.	.	END=3830984;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999344:3,3:3-3,3-3:14,25,0,0:3,14:NULL:289.904:366.612,131.36:0.0,0.0:0.0,0.000518182,0.999484	0/0:63:1.0:3,3:3-3,3-3:38,22,0,3:3,38:2,3:370.915:326.675,113.385:0.0,0.0:0.0,1.51153e-11,1.0
+chr1	3835805	.	ACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3835830;RU=ac;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:55:0.524651:21,21:19-24,19-24:16,17,0,20:19,3|20,2|21,9|22,2:4,1|5,1|7,1|10,3|12,1|14,3|16,3|17,1|18,4|19,1|20,1:410.769:366.612,131.36:1.4981,1.4981:0.0,0.0,1.0	0/0:44:0.990705:13,13:12-13,12-13:17,19,0,7:12,3|13,14:8,1|9,1|10,2|11,1|12,1|13,1:317.303:326.675,113.385:0.222277,0.222277:4.40569e-26,0.0089973,0.991023
+chr1	3838836	.	TTGTTTGTTTGTTTGTTTGT	TTGT	.	.	END=3838855;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0611499:1,1:1-3,1-3:0,19,0,0:NULL:NULL:176.361:366.612,131.36:0.763982,0.763982:0.495318,0.428118,0.0766308	0/0:22:0.99562:5,5:5-5,5-5:11,9,0,2:5,11:3,1|4,1:142.612:326.675,113.385:0.0,0.0:2.51935e-32,0.0024653,0.997541
+chr1	3842935	.	GTTTGTTTGTTTGTTT	GTTTGTTTGTTT	.	.	END=3842950;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.103226:3,3:1-4,1-4:0,13,0,3:NULL:2,2|3,1:139.412:366.612,131.36:0.668152,0.668152:0.265285,0.537828,0.196891	0/0:21:0.998957:4,4:4-4,4-4:13,5,0,3:4,13:2,3:122.152:326.675,113.385:0.0,0.0:1.62355e-39,0.000587118,0.999416
+chr1	3846941	.	ACCCACCCACCC	.	.	.	END=3846952;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.964559:3,3:3-3,3-3:8,7,0,0:3,8:NULL:90.4399:366.612,131.36:0.0,0.0:1.77949e-24,0.014786,0.985246	0/0:21:0.98379:3,3:3-3,3-3:9,12,0,0:3,9:NULL:143.689:326.675,113.385:0.0,0.0:3.48521e-27,0.00981038,0.990209
+chr1	3856577	.	CTTGCTTGCTTGCTTGCTTGCTTG	CTTGCTTGCTTGCTTGCTTGCTTGCTTG	.	.	END=3856600;RU=cttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.999866:7,7:7-7,7-7:16,22,0,6:7,16:3,2|4,1|6,3:304.611:366.612,131.36:0.0,0.0:0.0,1.80724e-05,0.999985	0/0:47:1.0:6,6:6-6,6-6:20,21,0,6:6,20:4,1|5,5:322.057:326.675,113.385:0.0,0.0:0.0,7.0502e-06,0.999994
+chr1	3858322	.	GGAGGGAGGGAG	.	.	.	END=3858333;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:287.409:366.612,131.36:0.0,0.0:0.0,6.46565e-13,1.0	0/0:40:1.0:3,3:3-3,3-3:28,10,0,2:3,28:2,2:214.309:326.675,113.385:0.0,0.0:0.0,1.39737e-08,1.0
+chr1	3859194	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTG	.	.	END=3859211;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:69:1.0:5,5:5-5,5-5:41,24,0,4:5,41:3,2|4,2:410.296:366.612,131.36:0.0,0.0:1.0,2.43332e-12,0.0	0/0:23:0.999991:6,6:6-6,6-6:18,3,0,2:6,18:4,1|5,1:115.133:326.675,113.385:0.0,0.0:4e-45,1.38367e-05,0.999987
+chr1	3863716	.	AATAACAATAACAATAAC	.	.	.	END=3863733;RU=aataac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:208.152:366.612,131.36:0.0,0.0:0.0,1.27778e-06,1.0	0/0:40:1.00001:3,3:3-3,3-3:21,15,0,4:3,21:2,4:248.811:326.675,113.385:0.0,0.0:0.0,2.85121e-06,1.0
+chr1	3869461	.	AAAACAAAACAAAACAAAACAAAAC	AAAAC	.	.	END=3869485;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0233967:1,1:1-2,1-2:0,7,0,0:NULL:NULL:61.8713:366.612,131.36:0.379868,0.379868:0.2013,0.56247,0.236278	0/0:40:0.999988:5,5:4-5,4-5:20,17,0,2:5,20:2,2:254.198:326.675,113.385:0.284901,0.284901:0.0,2.21254e-05,0.999979
+chr1	3870192	.	TAAATAAATAAA	.	.	.	END=3870203;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999475:3,3:3-3,3-3:14,20,0,0:3,14:NULL:237.66:366.612,131.36:0.0,0.0:0.0,0.000336171,0.999667	0/0:16:0.939518:3,3:3-3,3-3:7,9,0,0:3,7:NULL:111.194:326.675,113.385:0.0,0.0:1.192e-24,0.0342012,0.965862
+chr1	3870234	.	AAAATAAAATAAAAT	AAAATAAAAT	.	.	END=3870248;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999274:2,2:2-2,2-2:13,21,0,0:2,13:NULL:246.786:366.612,131.36:0.0,0.0:0.999607,0.000394087,3.85503e-36	0/0:14:0.945741:3,3:3-3,3-3:7,7,0,0:3,7:NULL:91.0854:326.675,113.385:0.0,0.0:1.41804e-21,0.0326951,0.967364
+chr1	3886751	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=3886794;RU=taga;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99542:11,11:10-11,10-11:12,14,0,0:11,12:NULL:180.536:366.612,131.36:0.36513,0.36513:5.1308e-32,0.00375858,0.996254	0/0:26:0.999928:11,11:11-11,11-11:17,4,0,4:11,17:3,1|5,1|9,1|10,1:141.46:326.675,113.385:0.139319,0.139319:3e-45,3.76311e-05,0.999964
+chr1	3896272	.	ACCCACCCACCC	.	.	.	END=3896283;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.683871:3,3:2-3,2-3:5,4,0,0:3,5:NULL:58.6488:366.612,131.36:0.169767,0.169767:5.75032e-15,0.148271,0.851811	0/0:46:0.997375:3,3:3-3,3-3:12,34,0,0:3,12:NULL:355.046:326.675,113.385:0.0,0.0:1.21639e-35,0.00217,0.997837
+chr1	3898788	.	TAAATAAATAAA	.	.	.	END=3898799;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:236.45:366.612,131.36:0.0,0.0:0.0,4.53293e-06,0.999995	0/0:22:0.998845:3,3:3-3,3-3:13,9,0,0:3,13:NULL:137.994:326.675,113.385:0.0,0.0:1.90907e-39,0.000696988,0.999308
+chr1	3898809	.	ATAATAATAATA	.	.	.	END=3898820;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999304:4,4:4-4,4-4:14,19,0,0:4,14:NULL:234.002:366.612,131.36:0.0,0.0:6.90189e-39,0.000574116,0.99943	0/0:14:0.843641:4,4:3-4,3-4:6,7,0,0:4,6:NULL:91.4475:326.675,113.385:0.497026,0.497026:9.08117e-17,0.0951607,0.904939
+chr1	3902855	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=3902882;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.972597:6,6:5-6,5-6:19,10,0,2:5,2|6,17:5,2:191.553:366.612,131.36:0.398507,0.398507:0.999994,8.10062e-06,9.10738e-35	0/0:32:0.999965:7,7:7-7,7-7:18,12,0,2:7,18:5,1|6,1:195.079:326.675,113.385:0.0,0.0:0.0,2.76481e-05,0.999972
+chr1	3908575	.	TGTTTTGTTTTGTTT	.	.	.	END=3908589;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:23,19,0,0:3,23:NULL:261.146:366.612,131.36:0.0,0.0:0.0,8.71967e-07,1.0	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:168.466:326.675,113.385:0.0,0.0:0.0,1.73616e-06,1.0
+chr1	3911778	.	ACAGACAGACAG	.	.	.	END=3911789;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,14,0,0:3,20:NULL:202.137:366.612,131.36:0.0,0.0:0.0,3.67449e-06,1.0	0/0:35:0.999993:3,3:3-3,3-3:19,14,0,2:3,19:2,2:218.129:326.675,113.385:0.0,0.0:0.0,1.6093e-05,0.999986
+chr1	3913472	.	CCCCACCCCCACCCCCAC	.	.	.	END=3913489;RU=ccccac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.994325:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.599:366.612,131.36:0.0,0.0:6.82753e-33,0.00376458,0.996247	0/0:17:0.799407:3,3:1-3,1-3:5,12,0,0:3,5:NULL:130.679:326.675,113.385:0.339533,0.339533:1.86304e-15,0.140504,0.85958
+chr1	3917711	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=3917748;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:18:0.889114:19,24:19-23,22-24:7,5,0,5:19,3|23,2|24,2:5,1|7,1|12,1|13,1|15,1:123.646:366.612,131.36:1.71576,0.657801:3.79657e-12,5.74102e-05,0.999942	0/0:23:0.682436:19,19:18-19,18-19:10,6,0,7:18,2|19,8:5,1|9,1|11,1|14,1|15,1|18,2:158.387:326.675,113.385:0.452422,0.452422:5.22233e-11,0.308645,0.691365
+chr1	3919065	.	TTTGTTTGTTTG	.	.	.	END=3919076;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999992:3,3:3-3,3-3:19,11,0,0:3,19:NULL:175.122:366.612,131.36:0.0,0.0:0.0,1.60593e-05,0.999986	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:218.523:326.675,113.385:0.0,0.0:0.0,1.10826e-06,1.0
+chr1	3919745	.	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTT	TATTTTATTTTATTTTATTTTATTTTATTT	.	.	END=3919794;RU=tattt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.940197:6,6:6-6,6-6:8,16,0,2:6,8:4,1|5,1:200.349:366.612,131.36:0.417958,0.417958:1.0,0.0,0.0	0/0:31:0.940551:10,10:10-10,10-10:7,12,0,12:10,7:4,5|6,4|7,1|8,1|9,1:223.928:326.675,113.385:0.0,0.0:5.12712e-19,0.0354483,0.964613
+chr1	3923978	.	TATATATATATATATA	TATATATATATATATATA	.	.	END=3923993;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.926104:9,9:7-10,7-10:8,4,0,0:9,8:NULL:67.4941:366.612,131.36:0.929323,0.929323:6.6815e-18,0.0350496,0.965016	0/0:18:0.998938:8,8:8-8,8-8:14,4,0,0:8,14:NULL:95.9206:326.675,113.385:0.0,0.0:3.50024e-20,0.000529512,0.999476
+chr1	3924698	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	END=3924742;RU=gagag;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.0643016:9,9:6-11,6-11:0,11,0,9:NULL:2,1|3,1|6,3|7,2|8,1|9,1:165.574:366.612,131.36:1.57311,1.57311:5.08532e-09,0.495721,0.504304	1/1:19:0.962867:8,8:8-8,8-8:8,8,0,3:8,8:5,1|6,1|7,1:132.604:326.675,113.385:0.0,0.0:0.985408,0.0146238,3.942e-21
+chr1	3924854	.	CTGCTGCTGCTG	.	.	.	END=3924865;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999785:4,4:4-4,4-4:16,13,0,0:4,16:NULL:184.539:366.612,131.36:0.0,0.0:0.0,0.000136256,0.999865	0/0:29:0.999959:4,4:4-4,4-4:18,11,0,0:4,18:NULL:175.104:326.675,113.385:0.0,0.0:0.0,4.83312e-05,0.999955
+chr1	3925698	.	AGAGAGAGAGAG	.	.	.	END=3925709;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:31,7,0,2:6,31:5,2:208.134:366.612,131.36:0.0,0.0:0.0,2.33183e-09,1.0	0/0:26:1.0:6,6:6-6,6-6:26,0,0,0:6,26:NULL:102.029:326.675,113.385:0.0,0.0:0.0,9.26147e-08,1.0
+chr1	3929285	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=3929312;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.99692:11,11:10-11,10-11:12,20,0,7:11,12:4,1|6,2|8,3|10,1:289.866:366.612,131.36:0.169767,0.169767:0.999713,0.000288637,6.51961e-32	0/0:41:0.19087:14,14:14-16,14-16:24,8,0,7:14,24:7,1|8,2|10,1|11,1|13,1|16,1:245.259:326.675,113.385:0.991682,0.991682:2.33484e-36,7.62607e-08,1.0
+chr1	3932876	.	AAAACAAAACAAAAC	.	.	.	END=3932890;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99924:3,3:3-3,3-3:13,14,0,0:3,13:NULL:182.319:366.612,131.36:0.0,0.0:1.5e-44,0.000526743,0.999476	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:136.58:326.675,113.385:0.0,0.0:0.0,8.88413e-06,0.999994
+chr1	3936576	.	AACAAACAAACA	.	.	.	END=3936587;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,16,0,0:3,23:NULL:233.798:366.612,131.36:0.0,0.0:0.0,1.09396e-06,1.0	0/0:23:0.999654:3,3:3-3,3-3:15,8,0,0:3,15:NULL:130.869:326.675,113.385:0.0,0.0:0.0,0.000206511,0.999796
+chr1	3943923	.	ATATATATATAT	.	.	.	END=3943934;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996744:6,6:6-6,6-6:12,17,0,0:6,12:NULL:198.475:366.612,131.36:0.0,0.0:2.90152e-22,0.00225795,0.997746	0/0:28:0.999959:6,6:6-6,6-6:18,10,0,0:6,18:NULL:165.23:326.675,113.385:0.0,0.0:1.10252e-32,4.65672e-05,0.999956
+chr1	3945858	.	AGAAAGAAAGAA	.	.	.	END=3945869;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.994776:3,3:3-3,3-3:11,13,0,0:3,11:NULL:164.432:366.612,131.36:0.0,0.0:9.3349e-38,0.00312694,0.996882	0/0:23:0.99866:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.299:326.675,113.385:0.0,0.0:1.5e-44,0.00084985,0.999156
+chr1	3949566	.	ACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=3949577;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0905103:15,15:3-15,3-15:4,18,0,0:15,4:NULL:186.702:366.612,131.36:4.19547,4.19547:0.0,0.533203,0.466901	0/0:35:0.999985:6,6:6-6,6-6:19,15,0,0:6,19:NULL:211.802:326.675,113.385:0.139319,0.139319:6e-45,2.42264e-05,0.999978
+chr1	3952215	.	AAACAAACAAACAAAC	.	.	.	END=3952230;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999761:4,4:3-4,3-4:15,20,0,4:4,15:2,2|3,2:270.441:366.612,131.36:0.345543,0.345543:0.0,0.000148609,0.999856	0/0:44:1.0:4,4:3-4,3-4:23,15,0,5:4,23:2,1|3,4:262.927:326.675,113.385:0.169767,0.169767:0.0,5.08034e-07,1.0
+chr1	3952974	.	AGACAGACAGAC	.	.	.	END=3952985;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:167.283:366.612,131.36:0.0,0.0:0.0,2.12211e-06,1.0	0/0:27:1.00001:3,3:3-3,3-3:21,4,0,2:3,21:2,2:131.297:326.675,113.385:0.0,0.0:0.0,1.24022e-06,1.0
+chr1	3955861	.	TAAATAAATAAA	.	.	.	END=3955872;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:231.683:366.612,131.36:0.0,0.0:0.0,2.6316e-07,1.0	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:147.329:326.675,113.385:0.0,0.0:0.0,4.77117e-07,1.0
+chr1	3956922	.	TAATAATAATAA	.	.	.	END=3956933;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999886:4,4:4-4,4-4:17,18,0,0:4,17:NULL:230.649:366.612,131.36:0.0,0.0:0.0,8.15416e-05,0.999919	0/0:49:1.0:4,4:4-4,4-4:31,16,0,2:4,31:3,2:286.016:326.675,113.385:0.0,0.0:0.0,2.13785e-09,1.0
+chr1	3960762	.	TGATGATGATGA	.	.	.	END=3960773;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:29,20,0,2:4,29:3,2:305.791:366.612,131.36:0.0,0.0:0.0,7.27355e-09,1.0	0/0:38:1.0:4,4:4-4,4-4:19,16,0,3:4,19:3,3:240.278:326.675,113.385:0.0,0.0:0.0,8.06454e-06,0.999994
+chr1	3967310	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3967353;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.306429:21,25:21-21,12-25:13,0,0,9:21,11|22,2:7,1|8,1|9,1|12,1|14,1|15,1|19,1|20,1|25,1:145.172:366.612,131.36:0.139319,4.93443:7.43147e-05,0.999921,4.24387e-06	1/0:33:0.71542:21,22:19-23,21-23:8,13,0,10:21,3|22,5:6,1|11,2|12,3|15,1|17,1|18,1|21,1:236.647:326.675,113.385:1.12802,0.516942:0.000163929,0.727214,0.272628
+chr1	3969294	.	CAAACAAACAAACAAA	.	.	.	END=3969309;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:20,14,0,2:4,20:3,2:225.215:366.612,131.36:0.0,0.0:0.0,6.4141e-06,0.999995	0/0:26:0.995609:4,4:4-4,4-4:12,14,0,0:4,12:NULL:169.889:326.675,113.385:0.0,0.0:6.9e-43,0.00336124,0.996648
+chr1	3972539	.	TTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTAT	.	.	END=3972558;RU=ttat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.00001:6,6:6-6,6-6:20,14,0,5:6,20:3,1|4,1|5,3:241.788:366.612,131.36:0.0,0.0:0.0,6.07488e-07,1.0	0/0:30:0.999802:5,5:5-5,5-5:16,12,0,2:5,16:4,2:188.376:326.675,113.385:0.0,0.0:0.0,0.000120794,0.99988
+chr1	3985823	.	CACACACACACA	CA	.	.	END=3985834;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:40:1.00001:6,6:6-6,6-6:21,14,0,5:6,21:4,1|5,4:249.701:326.675,113.385:0.0,0.0:0.0,1.83576e-06,1.0
+chr1	3992697	.	GCAGAGGCAGAGGCAGAG	.	.	.	END=3992714;RU=gcagag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:25,21,0,2:3,25:2,2:304.686:366.612,131.36:0.0,0.0:0.0,1.71221e-07,1.0	0/0:28:0.999906:3,3:3-3,3-3:17,11,0,0:3,17:NULL:169.069:326.675,113.385:0.0,0.0:0.0,7.31684e-05,0.999926
+chr1	3996489	.	ACACACACACACACACACACACAC	ACACACACACACAC	.	.	END=3996512;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:1.0:7,7:7-7,7-7:20,7,0,0:7,20:NULL:142.446:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:37:0.999811:12,12:11-12,11-12:16,11,0,9:12,16:7,3|8,3|10,1|11,2:240.974:326.675,113.385:0.169767,0.169767:1.96006e-27,8.2643e-05,0.999918
+chr1	3997264	.	TTATTATTATTA	.	.	.	END=3997275;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99985:4,4:4-4,4-4:16,10,0,0:4,16:NULL:155.95:366.612,131.36:0.0,0.0:0.0,0.00010225,0.999902	0/0:17:0.979968:4,4:4-4,4-4:9,8,0,0:4,9:NULL:108.54:326.675,113.385:0.0,0.0:1.74558e-27,0.0128414,0.987186
+chr1	3997282	.	TTTATTTATTTA	.	.	.	END=3997293;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:163.036:366.612,131.36:0.0,0.0:0.0,4.92314e-06,0.999995	0/0:19:0.999445:3,3:3-3,3-3:14,5,0,0:3,14:NULL:103.056:326.675,113.385:0.0,0.0:0.0,0.00029396,0.999706
+chr1	4000875	.	ATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=4000920;RU=at;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.405946:8,8:8-8,8-8:3,2,0,0:8,3:NULL:33.0948:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/2:4:0.224362:21,21:18-21,18-21:2,2,0,0:21,2:NULL:27.9122:326.675,113.385:0.650759,0.650759:0.768271,0.231586,0.000171727
+chr1	4008030	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4008077;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.39318:21,21:19-23,19-23:10,17,0,14:19,2|21,6|22,2:5,1|6,1|8,2|10,1|11,1|12,1|15,1|18,2|19,1|20,3:320.681:366.612,131.36:1.12445,1.12445:0.997836,0.00217262,4.18948e-16	0/2:40:0.262515:24,41:24-25,24-44:10,11,0,19:23,2|24,6|25,2:4,1|6,1|7,1|11,1|13,1|14,2|16,2|17,1|18,2|19,1|21,1|22,3|23,1|41,1:316.903:326.675,113.385:0.35561,8.37565:7.71648e-11,1.76728e-05,0.999986
+chr1	4008365	.	AAGAAAGAAAGA	.	.	.	END=4008376;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,20,0,0:3,24:NULL:269.288:366.612,131.36:0.0,0.0:0.0,3.01382e-07,1.0	0/0:23:0.999946:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.165:326.675,113.385:0.0,0.0:0.0,2.00184e-05,0.99998
+chr1	4012417	.	AAAGAAAGAAAG	.	.	.	END=4012428;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999412:3,3:3-3,3-3:14,19,0,0:3,14:NULL:232.822:366.612,131.36:0.0,0.0:0.0,0.000418171,0.999583	0/0:20:0.999853:3,3:3-3,3-3:16,4,0,0:3,16:NULL:98.1249:326.675,113.385:0.0,0.0:0.0,7.07918e-05,0.999933
+chr1	4014539	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4014563;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999984:5,5:5-5,5-5:17,15,0,3:5,17:2,1|3,1|4,1:234.113:366.612,131.36:0.0,0.0:0.0,2.31096e-05,0.999979	0/0:30:0.999961:5,5:5-5,5-5:18,12,0,0:5,18:NULL:178.102:326.675,113.385:0.0,0.0:0.0,4.37563e-05,0.999957
+chr1	4019418	.	TATTTATTTATT	.	.	.	END=4019429;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:29,20,0,3:3,29:2,3:324.942:366.612,131.36:0.0,0.0:0.0,5.3575e-09,1.0	0/0:31:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:183.726:326.675,113.385:0.0,0.0:0.0,9.13158e-06,0.999993
+chr1	4036362	.	CTGGAGCTGGAGCTGGAG	.	.	.	END=4036379;RU=ctggag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:241.53:366.612,131.36:0.0,0.0:0.0,5.28407e-07,1.0	0/0:58:1.0:3,3:3-3,3-3:33,23,0,2:3,33:2,1|3,1:350.227:326.675,113.385:0.0,0.0:0.0,3.79735e-10,1.0
+chr1	4039989	.	TTGTTGTTGTTGTTG	.	.	.	END=4040003;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999953:5,5:5-5,5-5:17,11,0,4:5,17:4,3|5,1:198.973:366.612,131.36:0.0,0.0:0.0,1.54565e-05,0.999986	0/0:18:0.99925:5,5:5-5,5-5:14,4,0,0:5,14:NULL:89.9581:326.675,113.385:0.0,0.0:2.772e-42,0.000409517,0.999591
+chr1	4042319	.	CTTCTTCTTCTT	.	.	.	END=4042330;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999908:4,4:4-4,4-4:17,17,0,0:4,17:NULL:225.388:366.612,131.36:0.0,0.0:0.0,5.97355e-05,0.999941	0/0:27:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:131.321:326.675,113.385:0.0,0.0:0.0,1.48064e-06,1.0
+chr1	4043396	.	AGAAAAGAAAAGAAA	.	.	.	END=4043410;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.986364:3,3:3-3,3-3:9,8,0,0:3,9:NULL:111.117:366.612,131.36:0.0,0.0:1.46513e-23,0.00742272,0.992595	0/0:26:0.998571:3,3:3-3,3-3:12,12,0,2:3,12:2,2:163.438:326.675,113.385:0.0,0.0:5.81734e-31,0.000729566,0.999272
+chr1	4043458	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4043521;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:16:0.0474443:24,32:12-34,14-34:0,8,0,8:NULL:6,1|11,1|12,1|17,1|22,1|24,2|32,1:139.366:366.612,131.36:5.90214,4.69152:1.60462e-07,0.855372,0.144712	2/2:12:0.0103348:28,28:20-31,20-31:0,2,0,7:NULL:6,1|8,1|12,1|14,1|15,1|24,1|28,1:72.7319:326.675,113.385:5.03241,5.03241:0.48066,0.444317,0.0751495
+chr1	4048648	.	GAGTGAGTGAGT	.	.	.	END=4048659;RU=gagt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:33,25,0,0:3,33:NULL:358.07:366.612,131.36:0.0,0.0:0.0,1.58187e-09,1.0	0/0:52:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:304.176:326.675,113.385:0.0,0.0:0.0,1.0279e-09,1.0
+chr1	4048769	.	AATTAATTAATTAATTAATTAATT	.	.	.	END=4048792;RU=aatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:21,19,0,2:6,21:3,1|4,1:279.964:366.612,131.36:0.0,0.0:0.0,5.16892e-06,0.999995	0/0:34:0.998984:6,6:5-6,5-6:15,18,0,0:6,15:NULL:229.027:326.675,113.385:0.334882,0.334882:1.13576e-37,0.000935996,0.999066
+chr1	4049279	.	AAACAAACAAACAAAC	.	.	.	END=4049294;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:18,19,0,7:4,18:3,7:299.67:366.612,131.36:0.0,0.0:0.0,8.99795e-06,0.999994	0/0:40:1.0:4,4:4-4,4-4:26,14,0,0:4,26:NULL:233.691:326.675,113.385:0.0,0.0:0.0,2.26657e-07,1.0
+chr1	4055341	.	ATTATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=4055376;RU=att;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999969:12,12:12-12,12-12:18,10,0,6:12,18:7,2|10,3|11,1:213.116:366.612,131.36:0.14072,0.14072:3.86333e-28,2.54812e-05,0.999978	0/0:39:0.999999:12,12:12-12,12-12:19,12,0,8:12,19:4,2|6,1|7,1|9,1|10,1|11,2:247.211:326.675,113.385:0.0,0.0:6.52832e-30,8.2327e-06,0.999994
+chr1	4056452	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4056505;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.17784:27,27:26-30,26-30:2,15,0,8:27,2:7,1|12,1|14,1|17,3|22,1|25,1:218.029:366.612,131.36:1.68439,1.68439:0.00145928,0.39155,0.607056	0/0:35:0.31158:27,27:23-28,23-28:3,21,0,9:27,3:7,1|10,1|16,1|17,2|21,1|23,2|27,1:279.724:326.675,113.385:2.33668,2.33668:7.22297e-12,0.453397,0.546713
+chr1	4060377	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=4060396;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.997495:6,6:6-6,6-6:12,10,0,6:6,12:4,3|5,2|6,1:184.752:366.612,131.36:0.0,0.0:0.0,0.000218626,0.999782	0/0:31:0.999979:5,5:5-5,5-5:18,10,0,3:5,18:3,2|4,1:185.131:326.675,113.385:0.0,0.0:0.0,1.62247e-05,0.999986
+chr1	4063131	.	CACACACACACACA	.	.	.	END=4063144;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:7,7:7-8,7-8:20,17,0,5:7,20:5,2|6,3:266.987:366.612,131.36:0.195027,0.195027:2.772e-42,2.99005e-06,1.0	0/0:38:1.0:7,7:7-7,7-7:24,14,0,0:7,24:NULL:227.233:326.675,113.385:0.0,0.0:0.0,4.36936e-07,1.0
+chr1	4065627	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4065661;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.00001:5,5:5-5,5-5:21,8,0,4:5,21:3,2|4,2:183.106:366.612,131.36:0.0,0.0:1.0,1.37486e-06,0.0	1/0:31:0.954031:5,7:5-7,7-7:13,10,0,8:5,2|7,11:3,2|4,1|5,1|6,4:213.486:326.675,113.385:0.985733,0.0:5.22102e-30,0.954154,0.0459211
+chr1	4065673	.	AAACAAACAAACAAAC	.	.	.	END=4065688;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:20,12,0,2:4,20:3,2:202.169:366.612,131.36:0.0,0.0:0.0,2.97336e-06,1.0	0/0:27:1.0:4,4:4-4,4-4:21,6,0,0:4,21:NULL:139.16:326.675,113.385:0.0,0.0:0.0,3.96176e-06,0.999995
+chr1	4069662	.	ATTAATTAATTAATTAATTAATTA	.	.	.	END=4069685;RU=atta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.999628:6,6:6-6,6-6:15,1,0,0:6,15:NULL:68.9845:366.612,131.36:0.0,0.0:6.7e-44,0.000183829,0.999819	0/0:10:0.748805:6,6:6-6,6-6:5,5,0,0:6,5:NULL:66.1588:326.675,113.385:0.0,0.0:4.26125e-15,0.160237,0.839837
+chr1	4070485	.	ATATATATATATAT	.	.	.	END=4070498;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.915977:7,7:7-8,7-8:16,14,0,0:7,13|8,3:NULL:199.227:366.612,131.36:0.398507,0.398507:8.33491e-19,0.000217094,0.999787	0/0:14:0.987133:7,7:7-7,7-7:10,4,0,0:7,10:NULL:76.1992:326.675,113.385:0.0,0.0:6.28506e-12,0.00772012,0.992296
+chr1	4070608	.	GTTAGTTAGTTA	.	.	.	END=4070619;RU=gtta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.416:366.612,131.36:0.0,0.0:0.0,1.74971e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:31,5,0,2:3,31:2,2:183.313:326.675,113.385:0.0,0.0:0.0,1.47285e-09,1.0
+chr1	4086252	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=4086285;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:0.99982:13,13:13-13,13-13:24,18,0,11:12,3|13,21:6,1|7,1|8,2|9,1|10,2|11,2|12,2:360.267:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/0:35:0.998783:17,17:14-17,14-17:15,8,0,10:17,15:4,1|7,3|8,1|9,3|11,1|14,1:218.492:326.675,113.385:0.970701,0.970701:2.62421e-20,0.000455687,0.999546
+chr1	4088150	.	GTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4088169;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.994246:6,6:6-6,6-6:11,14,0,7:6,11:2,1|3,3|4,1|5,2:226.958:366.612,131.36:0.0,0.0:0.0,0.000958557,0.999044	0/0:69:1.0:5,5:5-5,5-5:34,27,0,8:5,34:2,1|4,7:447.005:326.675,113.385:0.0,0.0:0.0,3.86099e-10,1.0
+chr1	4090397	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4090442;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:41:0.269344:26,34:26-27,26-37:6,17,0,17:26,4|27,2:6,1|7,1|9,2|10,1|12,1|13,1|14,2|15,1|17,1|18,1|19,1|25,3|34,1:335.572:366.612,131.36:0.478127,3.78591:2.6192e-41,8.59452e-08,1.0	1/0:35:0.726241:22,23:21-23,23-23:11,5,0,17:21,2|22,3|23,6:6,2|7,1|8,2|12,2|13,1|14,2|16,1|20,2|21,3|22,1:238.146:326.675,113.385:0.754297,0.314035:7.48832e-05,0.783309,0.216657
+chr1	4091063	.	ACAACAACAACAACA	.	.	.	END=4091077;RU=aca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999691:5,5:5-5,5-5:15,11,0,0:5,15:NULL:159.729:366.612,131.36:0.0,0.0:2.7e-44,0.000197065,0.999804	0/0:42:1.0:5,5:5-5,5-5:25,14,0,3:5,25:4,3:249.245:326.675,113.385:0.0,0.0:0.0,7.75351e-08,1.0
+chr1	4095201	.	AAGGAAGGAAGG	.	.	.	END=4095212;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:24,19,0,4:3,24:2,4:291.104:366.612,131.36:0.0,0.0:0.0,1.63943e-07,1.0	0/0:23:0.999568:3,3:3-3,3-3:14,9,0,0:3,14:NULL:136.301:326.675,113.385:0.0,0.0:0.0,0.000262446,0.999742
+chr1	4095413	.	TTTGTTTGTTTGTTTG	.	.	.	END=4095428;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:24,11,0,2:4,24:3,2:208.474:366.612,131.36:0.0,0.0:0.0,2.60547e-07,1.0	0/0:33:0.999912:4,4:4-4,4-4:16,11,0,6:4,16:3,6:204.035:326.675,113.385:0.0,0.0:0.0,3.98243e-05,0.999963
+chr1	4100799	.	ATTTTATTTTATTTTATTTTATTTTATTTT	ATTTTATTTTATTTTATTTTATTTT	.	.	END=4100828;RU=atttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:5,5:5-5,5-5:28,11,0,0:5,28:NULL:216.446:366.612,131.36:0.314035,0.314035:1.0,1.76026e-08,0.0	0/0:30:0.999887:6,6:6-7,6-7:16,9,0,4:6,16:2,1|4,1|5,2:174.799:326.675,113.385:0.284901,0.284901:1.77483e-39,5.38703e-05,0.999948
+chr1	4101417	.	TGTTGTTGTTGTTGT	.	.	.	END=4101431;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999503:5,5:5-6,5-6:14,10,0,3:5,14:3,1|4,2:168.403:366.612,131.36:0.390807,0.390807:1.25007e-37,0.000219022,0.999782	0/0:24:0.999739:5,5:5-5,5-5:15,5,0,4:5,15:3,2|4,2:132.402:326.675,113.385:0.0,0.0:2.26489e-40,9.25796e-05,0.99991
+chr1	4107366	.	TATATATATATA	TATATATA	.	.	END=4107377;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999018:4,4:4-4,4-4:14,12,0,0:4,14:NULL:169.247:366.612,131.36:0.0,0.0:0.999828,0.000172148,0.0	0/0:25:0.999995:6,6:6-6,6-6:19,5,0,0:6,19:NULL:125.715:326.675,113.385:0.139319,0.139319:1.95623e-34,1.41815e-05,0.999987
+chr1	4112131	.	GCTGCTGCTGCT	.	.	.	END=4112142;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,16,0,2:4,23:3,2:252.469:366.612,131.36:0.0,0.0:0.0,5.36964e-07,1.0	0/0:22:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:102.343:326.675,113.385:0.0,0.0:0.0,1.31815e-05,0.999987
+chr1	4114636	.	CTATCTATCTAT	.	.	.	END=4114647;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:20,14,0,4:3,20:2,4:231.282:366.612,131.36:0.0,0.0:0.0,3.55721e-06,1.0	0/0:47:1.0:3,3:3-3,3-3:27,18,0,2:3,27:2,2:283.559:326.675,113.385:0.0,0.0:0.0,3.29652e-08,1.0
+chr1	4116064	.	CTCTCTCTCTCT	CTCTCTCTCT	.	.	END=4116075;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:5,5:5-5,5-5:29,12,0,0:5,29:NULL:225.742:366.612,131.36:0.0,0.0:1.0,1.27345e-08,0.0	0/0:32:0.999995:6,6:5-6,5-6:20,11,0,0:6,20:NULL:178.829:326.675,113.385:0.236383,0.236383:0.0,1.40272e-05,0.999987
+chr1	4119174	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4119245;RU=aaag;PERIOD=4;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0352826:14,14:14-18,14-18:0,9,0,0:NULL:NULL:85.5332:366.612,131.36:0.91647,0.91647:0.411079,0.463977,0.125045	0/0:26:0.407903:18,18:15-18,15-18:4,10,0,10:18,4:3,1|4,1|5,1|9,2|10,2|13,2|16,1:184.936:326.675,113.385:1.39643,1.39643:6.16298e-09,0.46418,0.535927
+chr1	4121252	.	TGTCTGTCTGTC	.	.	.	END=4121263;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:215.764:366.612,131.36:0.0,0.0:0.0,3.36844e-06,1.0	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:347.076:326.675,113.385:0.0,0.0:0.0,5.83131e-09,1.0
+chr1	4122075	.	AAATAAATAAAT	.	.	.	END=4122086;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999747:3,3:3-3,3-3:15,19,0,0:3,15:NULL:238.814:366.612,131.36:0.0,0.0:0.0,0.000190552,0.999811	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:181.442:326.675,113.385:0.0,0.0:0.0,3.61167e-07,1.0
+chr1	4122666	.	ATCTATCTATCT	.	.	.	END=4122677;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999583:3,3:3-3,3-3:15,18,0,2:3,15:2,2:240.054:366.612,131.36:0.0,0.0:0.0,0.000271211,0.999729	0/0:44:1.0:3,3:3-3,3-3:26,14,0,4:3,26:2,4:261.757:326.675,113.385:0.0,0.0:0.0,3.76513e-08,1.0
+chr1	4123576	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=4123599;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.00001:5,5:5-5,5-5:22,14,0,6:5,22:2,1|3,2|4,3:254.229:366.612,131.36:0.0,0.0:1.0,1.48473e-06,0.0	0/0:48:1.0:6,6:6-6,6-6:25,13,0,10:6,25:2,1|3,5|4,2|5,2:286.859:326.675,113.385:0.0,0.0:0.0,9.49871e-08,1.0
+chr1	4123957	.	TCTCTCTCTCTCTC	TCTCTCTCTCTC	.	.	END=4123970;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.00002:6,6:6-13,6-13:20,9,0,0:6,20:NULL:164.174:366.612,131.36:3.50358,3.50358:0.999993,1.07436e-05,6.70284e-33	0/0:38:1.0:7,7:7-7,7-7:27,10,0,0:7,27:NULL:209.815:326.675,113.385:0.0,0.0:9.8278e-36,1.16556e-07,1.0
+chr1	4129715	.	CTTTCTTTCTTT	.	.	.	END=4129726;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997594:3,3:3-3,3-3:12,14,0,0:3,12:NULL:170.303:366.612,131.36:0.0,0.0:2.2163e-40,0.00131315,0.998693	0/0:41:1.00001:3,3:3-3,3-3:20,16,0,5:3,20:2,5:263.411:326.675,113.385:0.0,0.0:0.0,3.28561e-06,1.0
+chr1	4129886	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4129913;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.997906:6,6:6-6,6-6:12,7,0,3:6,12:5,3:135.019:366.612,131.36:0.0,0.0:0.998541,0.00146427,3.03668e-26	0/0:59:1.0:7,7:7-7,7-7:29,19,0,10:7,29:2,2|3,3|4,1|5,1|6,3:361.213:326.675,113.385:0.0,0.0:0.0,9.64579e-09,1.0
+chr1	4129930	.	TTGTTGTTGTTG	.	.	.	END=4129941;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99999:4,4:4-4,4-4:18,9,0,2:4,18:3,2:165.39:366.612,131.36:0.0,0.0:0.0,1.34504e-05,0.999987	0/0:62:1.0:4,4:4-4,4-4:33,27,0,2:4,33:3,2:382.399:326.675,113.385:0.0,0.0:0.0,7.35907e-10,1.0
+chr1	4140418	.	TTTGTTTGTTTG	.	.	.	END=4140429;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:188.772:366.612,131.36:0.0,0.0:0.0,5.09731e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:204.552:326.675,113.385:0.0,0.0:0.0,8.95016e-06,0.999994
+chr1	4140449	.	TTTGGTTTGGTTTGG	.	.	.	END=4140463;RU=tttgg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:161.345:366.612,131.36:0.0,0.0:0.0,6.67801e-06,0.999994	0/0:28:0.999782:3,3:3-3,3-3:15,13,0,0:3,15:NULL:180.456:326.675,113.385:0.0,0.0:0.0,0.000169065,0.999834
+chr1	4142498	.	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	.	.	END=4142575;RU=cag;PERIOD=3;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.105745:27,27:26-28,26-28:0,20,0,17:NULL:6,1|8,1|14,1|15,1|16,1|17,2|18,1|19,2|20,1|21,1|22,1|23,1|25,1|27,2:318.949:366.612,131.36:0.964013,0.964013:3.46523e-16,0.372634,0.627414	0/0:62:0.673074:26,26:25-27,25-27:4,25,0,31:26,4:4,1|5,1|6,1|7,2|8,1|9,3|10,1|11,1|12,1|13,2|14,2|15,1|17,1|18,1|19,1|20,2|21,1|22,3|23,1|24,2|25,2:482.865:326.675,113.385:0.678922,0.678922:1.65866e-07,0.112299,0.887802
+chr1	4144308	.	TTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=4144334;RU=ttg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999524:10,10:8-11,8-11:15,11,0,2:10,15:6,1|9,1:179.861:366.612,131.36:0.743036,0.743036:0.0,0.000188528,0.999812	0/0:48:1.0:9,9:9-9,9-9:28,12,0,8:9,28:3,2|5,1|6,1|7,3|8,1:286.039:326.675,113.385:0.0,0.0:0.0,1.41547e-08,1.0
+chr1	4144510	.	TTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTTTTGTT,TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	END=4144529;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:1.0:5,8:5-5,8-8:13,7,0,0:5,7|8,6:NULL:126.229:366.612,131.36:0.0,0.29703:0.0,4.58966e-24,1.0	0/0:53:0.993702:4,4:4-6,4-6:33,17,0,3:4,33:3,2|6,1:323.727:326.675,113.385:0.81164,0.81164:0.0,9.36676e-10,1.0
+chr1	4148898	.	TTTATTTTATTTTAT	.	.	.	END=4148912;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.419:366.612,131.36:0.0,0.0:0.0,6.91862e-06,0.999994	0/0:35:1.0:3,3:3-3,3-3:22,13,0,0:3,22:NULL:215.568:326.675,113.385:0.0,0.0:0.0,3.91503e-06,0.999995
+chr1	4153288	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=4153307;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.789864:5,5:5-5,5-5:5,19,0,2:5,5:3,2:210.391:366.612,131.36:0.19802,0.19802:1.59991e-17,0.15992,0.840154	0/0:45:1.00001:5,5:5-5,5-5:20,17,0,7:5,20:2,1|3,2|4,4:288.974:326.675,113.385:0.0990099,0.0990099:0.0,3.58766e-06,1.0
+chr1	4163090	.	ATTATTATTATT	.	.	.	END=4163101;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999898:4,4:4-4,4-4:16,17,0,3:4,16:3,3:235.259:366.612,131.36:0.0,0.0:0.0,4.16304e-05,0.999962	0/0:45:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:267.259:326.675,113.385:0.0,0.0:0.0,1.23235e-07,1.0
+chr1	4168643	.	TTTATTTATTTA	.	.	.	END=4168654;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:240.263:366.612,131.36:0.0,0.0:0.0,1.01644e-10,1.0	0/0:35:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:217.241:326.675,113.385:0.0,0.0:0.0,7.03676e-06,0.999994
+chr1	4173459	.	ATTTATTTATTTATTT	.	.	.	END=4173474;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:21,17,0,2:4,21:3,2:258.487:366.612,131.36:0.0,0.0:0.0,4.15327e-06,0.999995	0/0:25:0.997971:4,4:4-4,4-4:12,9,0,4:4,12:3,4:159.204:326.675,113.385:0.0,0.0:3.14464e-38,0.000692925,0.99931
+chr1	4185941	.	TTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=4185952;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.984525:4,4:4-4,4-4:9,7,0,3:4,9:2,1|3,2:127.34:366.612,131.36:0.0,0.0:0.0,0.0021856,0.997821	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:159.974:326.675,113.385:0.0,0.0:0.0,3.14951e-06,1.0
+chr1	4186148	.	TAAATAAATAAA	.	.	.	END=4186159;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.96708:3,3:3-3,3-3:8,14,0,0:3,8:NULL:160.325:366.612,131.36:0.0,0.0:3.57923e-27,0.0206187,0.979424	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:184.863:326.675,113.385:0.0,0.0:0.0,3.44099e-07,1.0
+chr1	4195196	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG	.	.	END=4195231;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.998545:8,8:8-8,8-8:13,16,0,11:8,13:4,1|5,4|6,2|7,4:285.784:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:45:0.512226:18,18:17-18,17-18:16,12,0,16:17,4|18,12:5,3|6,1|7,1|11,3|13,2|14,1|15,2|16,3:312.952:326.675,113.385:0.489674,0.489674:1.30546e-13,0.487717,0.512341
+chr1	4196255	.	TTTGTTTGTTTG	.	.	.	END=4196266;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:2-3,2-3:29,23,0,0:3,29:NULL:332.851:366.612,131.36:0.19802,0.19802:0.0,1.48593e-08,1.0	0/0:46:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:263.701:326.675,113.385:0.0,0.0:0.0,8.27065e-09,1.0
+chr1	4199614	.	AATTAATTAATT	.	.	.	END=4199625;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.998573:3,3:3-3,3-3:13,11,0,0:3,13:NULL:150.683:366.612,131.36:0.0,0.0:2.367e-42,0.000925454,0.99908	0/0:16:0.990811:3,3:3-3,3-3:10,6,0,0:3,10:NULL:89.9067:326.675,113.385:0.0,0.0:5.26693e-33,0.00436205,0.99565
+chr1	4201150	.	TAAATAAATAAA	.	.	.	END=4201161;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.664:366.612,131.36:0.0,0.0:0.0,3.7601e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:164.257:326.675,113.385:0.0,0.0:0.0,7.31605e-08,1.0
+chr1	4201564	.	AAACAAACAAAC	.	.	.	END=4201575;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:29,24,0,0:3,29:NULL:333.733:366.612,131.36:0.0,0.0:0.0,2.26288e-08,1.0	0/0:49:1.0:3,3:3-3,3-3:30,17,0,2:3,30:2,2:288.108:326.675,113.385:0.0,0.0:0.0,4.0014e-09,1.0
+chr1	4202537	.	AAATAAATAAAT	.	.	.	END=4202548;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999995:3,3:3-3,3-3:19,16,0,0:3,19:NULL:222.381:366.612,131.36:0.0,0.0:0.0,1.16407e-05,0.999987	0/0:34:1.0:3,3:3-3,3-3:23,9,0,2:3,23:2,2:186.422:326.675,113.385:0.0,0.0:0.0,3.56569e-07,1.0
+chr1	4208149	.	AACAAACAAACA	.	.	.	END=4208160;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999617:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.19:366.612,131.36:0.0,0.0:0.0,0.000186105,0.999818	0/0:30:0.999891:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.852:326.675,113.385:0.0,0.0:0.0,6.16608e-05,0.999941
+chr1	4212306	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=4212333;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999851:5,5:5-5,5-5:16,21,0,4:5,16:2,1|3,1|4,2:287.361:366.612,131.36:0.0,0.0:0.999971,3.26505e-05,6.2e-44	0/0:30:1.0:7,7:7-7,7-7:21,9,0,0:7,21:NULL:169.604:326.675,113.385:0.0,0.0:0.0,4.44128e-06,0.999995
+chr1	4215533	.	ATACATACATACATACATACATACATACATACATAC	ATACATACATACATACATACATACATACATACATACATAC	.	.	END=4215568;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.995602:10,10:9-10,9-10:11,19,0,18:10,11:2,1|3,2|4,4|5,2|6,4|7,2|8,2|9,1:355.453:366.612,131.36:0.323567,0.323567:1.31864e-37,0.00111544,0.99889	0/0:43:0.993646:9,9:9-9,9-9:11,13,0,19:9,11:3,3|4,3|5,2|6,3|7,5|8,3:308.544:326.675,113.385:0.0,0.0:2.63742e-21,0.00276035,0.997246
+chr1	4216566	.	TGGGTGGGTGGG	.	.	.	END=4216577;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:35,22,0,0:3,35:NULL:332.45:366.612,131.36:0.0,0.0:0.0,2.70489e-10,1.0	0/0:73:1.0:3,3:3-3,3-3:41,32,0,0:3,41:NULL:443.123:326.675,113.385:0.0,0.0:0.0,3.03466e-12,1.0
+chr1	4219533	.	ACCCACCCACCC	.	.	.	END=4219544;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.935437:3,3:3-3,3-3:7,10,0,0:3,7:NULL:119.381:366.612,131.36:0.0,0.0:1.49863e-20,0.0345989,0.965464	0/0:30:0.961038:3,3:3-3,3-3:8,22,0,0:3,8:NULL:225.816:326.675,113.385:0.0,0.0:2.78787e-23,0.0278937,0.972158
+chr1	4222234	.	TGATGATGATGA	.	.	.	END=4222245;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999847:4,4:4-4,4-4:16,11,0,0:4,16:NULL:165.48:366.612,131.36:0.0,0.0:0.0,0.000104117,0.999896	0/0:45:1.00001:4,4:4-4,4-4:20,21,0,4:4,20:3,4:302.025:326.675,113.385:0.0,0.0:0.0,3.68792e-06,1.0
+chr1	4239423	.	AAACAAACAAACAAACAAAC	.	.	.	END=4239442;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:5,5:5-5,5-5:26,16,0,4:5,26:2,1|3,2|4,1:279.305:366.612,131.36:0.0,0.0:0.0,6.7303e-08,1.0	0/0:44:1.00001:5,5:5-5,5-5:22,14,0,8:5,22:2,3|3,3|4,2:271.56:326.675,113.385:0.0,0.0:0.0,6.11487e-07,1.0
+chr1	4243137	.	TCTGTCTGTCTG	.	.	.	END=4243148;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:213.688:366.612,131.36:0.0,0.0:0.0,5.45651e-07,1.0	0/0:59:1.0:3,3:3-3,3-3:29,26,0,4:3,29:2,4:378.044:326.675,113.385:0.0,0.0:0.0,7.81909e-09,1.0
+chr1	4243659	.	TTGTTGTTGTTGTTG	.	.	.	END=4243673;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:5,5:5-5,5-5:31,21,0,2:5,31:4,2:327.119:366.612,131.36:0.0,0.0:0.0,1.94798e-09,1.0	0/0:48:1.0:5,5:5-5,5-5:38,6,0,3:5,38:4,3:224.836:326.675,113.385:0.0990099,0.0990099:0.0,1.20459e-11,1.0
+chr1	4244758	.	AACAACAACAAC	.	.	.	END=4244769;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:31,16,0,3:4,31:3,3:293.809:366.612,131.36:0.0,0.0:0.0,2.75083e-09,1.0	0/0:45:1.0:4,4:4-4,4-4:27,15,0,3:4,27:3,3:266.465:326.675,113.385:0.0,0.0:0.0,4.53214e-08,1.0
+chr1	4247940	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4247969;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:1.0:11,11:11-11,11-11:31,6,0,6:10,3|11,28:7,2|8,2|10,1|11,1:236.495:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/2:48:0.301817:15,19:15-15,15-20:20,10,0,17:14,2|15,18:5,2|6,1|7,1|9,1|10,5|11,1|12,1|14,4|19,1:327.643:326.675,113.385:0.0,2.03272:2.09358e-25,5.07357e-06,0.999995
+chr1	4261751	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4261794;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.487749:8,8:6-10,6-10:4,20,0,0:8,4:NULL:198.192:366.612,131.36:1.16916,1.16916:0.958826,0.0412442,5.35052e-12	0/0:27:0.982188:11,11:11-11,11-11:8,7,0,12:11,8:2,1|3,1|5,3|7,2|8,1|10,2|11,2:184.845:326.675,113.385:0.0,0.0:2.19061e-33,0.00320668,0.9968
+chr1	4269351	.	AAATAAATAAAT	.	.	.	END=4269362;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:320.916:366.612,131.36:0.0,0.0:0.0,8.01632e-08,1.0	0/0:54:1.0:3,3:3-3,3-3:40,12,0,2:3,40:2,2:283.617:326.675,113.385:0.0,0.0:0.0,6.96112e-12,1.0
+chr1	4275434	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACA	.	.	END=4275483;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:52:0.684601:20,21:19-22,19-22:10,18,0,23:19,3|20,3|21,4:7,1|8,3|10,1|11,3|12,1|13,2|14,1|15,2|16,2|17,1|18,1|19,4|20,1:401.399:366.612,131.36:0.840244,0.766416:0.999986,1.54866e-05,5.87923e-25	0/0:47:0.855347:25,25:24-26,24-26:13,10,0,22:24,3|25,10:6,2|7,1|8,3|9,1|10,2|14,1|15,1|16,2|17,1|18,1|20,1|21,3|22,2|23,1:332.119:326.675,113.385:0.579017,0.579017:1.34034e-09,0.14187,0.858217
+chr1	4275539	.	ATAATAATAATA	.	.	.	END=4275550;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999984:4,4:4-4,4-4:19,10,0,0:4,19:NULL:165.443:366.612,131.36:0.0,0.0:0.0,2.29498e-05,0.999979	0/0:33:1.0:4,4:4-4,4-4:26,7,0,0:4,26:NULL:164.927:326.675,113.385:0.0,0.0:0.0,1.25792e-07,1.0
+chr1	4281780	.	CAAACAAACAAA	.	.	.	END=4281791;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:290.686:366.612,131.36:0.0,0.0:0.0,3.08009e-09,1.0	0/0:53:1.0:3,3:3-3,3-3:38,15,0,0:3,38:NULL:284.782:326.675,113.385:0.0,0.0:0.0,2.32525e-11,1.0
+chr1	4285029	.	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	.	.	END=4285113;RU=gaagg;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.0829037:17,17:5-20,5-20:0,19,0,17:NULL:4,2|5,2|6,1|7,1|10,1|12,2|14,4|15,2|17,2:296.393:366.612,131.36:3.15082,3.15082:5.1637e-16,0.546962,0.453146	1/0:31:0.99898:10,17:5-17,17-17:5,9,0,16:10,2|17,3:3,1|4,1|5,1|6,1|10,2|11,1|12,3|13,2|15,3|16,1:234.259:326.675,113.385:3.27335,0.372309:2.04025e-06,1.0,7.76487e-37
+chr1	4285247	.	GGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGG	.	.	.	END=4285300;RU=gggaaaggggaagaaagg;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.996535:3,3:3-3,3-3:16,21,0,0:3,16:NULL:264.925:366.612,131.36:0.278639,0.278639:3.66962e-18,0.00345612,0.996551	0/0:34:0.999955:3,3:3-3,3-3:17,14,0,3:3,17:2,1|3,2:222.686:326.675,113.385:0.0,0.0:4.41303e-37,5.37061e-05,0.999948
+chr1	4285317	.	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG,GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	.	.	END=4285436;RU=gaaag;PERIOD=5;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:46:0.0760872:25,25:18-26,18-26:0,20,0,26:NULL:3,1|4,3|5,1|6,2|7,2|9,2|10,2|11,1|13,1|14,2|15,1|16,1|17,1|19,1|22,1|23,3|24,1:368.821:366.612,131.36:2.10326,2.10326:4.20639e-09,0.458576,0.541533	1/1:23:0.0290068:23,23:10-24,10-24:0,7,0,16:NULL:4,2|5,1|6,2|10,3|11,1|13,1|14,1|15,2|18,1|22,1|23,1:178.687:326.675,113.385:4.1875,4.1875:0.291361,0.614,0.094706
+chr1	4287727	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4287770;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.704682:22,22:21-23,21-23:10,14,0,14:21,4|22,6:5,1|7,2|11,1|12,2|13,1|15,2|19,3|20,1|22,1:291.615:366.612,131.36:0.558156,0.558156:2.0267e-13,0.266838,0.733165	1/0:38:0.78164:20,22:20-22,22-22:8,14,0,16:20,3|22,5:5,2|8,2|9,1|10,1|11,3|13,2|16,1|18,3|21,1:296.738:326.675,113.385:0.973726,0.0990099:1.1863e-05,0.889694,0.11039
+chr1	4288691	.	TATATATATATA	TATATATATATATATA	.	.	END=4288702;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.697637:8,8:8-9,8-9:5,3,0,0:8,5:NULL:50.136:366.612,131.36:0.452422,0.452422:1.82103e-14,0.0505904,0.949488	0/0:20:0.999868:6,6:6-8,6-8:17,2,0,0:6,17:NULL:89.5175:326.675,113.385:0.390054,0.390054:6.16941e-24,6.33034e-05,0.99994
+chr1	4290243	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4290302;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:41:0.889527:16,16:11-16,11-16:7,18,0,14:16,7:2,1|4,1|5,2|6,1|7,2|8,1|11,3|12,1|15,2:307.69:366.612,131.36:2.34317,2.34317:7.37063e-31,0.0402759,0.959793	1/1:33:0.994339:14,14:13-14,13-14:11,13,0,8:14,11:3,1|5,1|7,1|9,1|11,1|12,2|13,1:230.879:326.675,113.385:0.169767,0.169767:0.99755,0.00245547,3.53208e-13
+chr1	4290307	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4290346;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.535683:19,19:18-19,18-19:10,17,0,7:18,3|19,7:7,1|10,1|11,1|13,1|16,1|17,1|18,1:269.431:366.612,131.36:0.498011,0.498011:0.980544,0.0194926,2.83766e-07	0/0:29:0.727856:20,20:18-20,18-20:5,12,0,11:20,5:7,1|9,3|10,2|12,1|16,1|17,1|19,1|20,1:224.134:326.675,113.385:0.851255,0.851255:1.73201e-15,0.0946413,0.905458
+chr1	4292154	.	TGTGTGTGTGTGTG	.	.	.	END=4292167;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999993:7,7:7-7,7-7:28,19,0,6:6,2|7,26:4,1|5,2|6,3:336.129:366.612,131.36:0.0,0.0:0.0,1.02349e-05,0.999993	0/0:35:1.00001:7,7:7-7,7-7:22,11,0,0:7,22:NULL:184.467:326.675,113.385:0.139319,0.139319:4.9e-44,2.60359e-06,1.0
+chr1	4293061	.	ATTTATTTATTT	.	.	.	END=4293072;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:3,3:3-3,3-3:21,20,0,3:3,21:2,3:284.62:366.612,131.36:0.0,0.0:0.0,1.84527e-06,1.0	0/0:25:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:118.827:326.675,113.385:0.0,0.0:0.0,2.20646e-06,1.0
+chr1	4297521	.	AAATAAATAAAT	.	.	.	END=4297532;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:2-3,2-3:24,14,0,2:3,24:2,2:241.549:366.612,131.36:0.21692,0.21692:0.0,2.96497e-07,1.0	0/0:29:0.999683:3,3:3-3,3-3:14,12,0,3:3,14:2,3:188.508:326.675,113.385:0.0,0.0:0.0,0.000159458,0.999842
+chr1	4298525	.	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	.	.	END=4298564;RU=aggg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.324771:10,11:10-12,10-12:2,14,0,8:10,2:2,1|6,1|7,1|8,1|9,2|11,2:195.225:366.612,131.36:0.91978,0.752475:2.09996e-18,0.00323195,0.996777	0/0:18:0.445983:10,10:8-10,8-10:3,9,0,5:10,3:3,1|6,1|7,1|8,1|9,1:135.037:326.675,113.385:0.963606,0.963606:8.30868e-05,0.335561,0.664371
+chr1	4303708	.	GTTTGTTTGTTT	.	.	.	END=4303719;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99999:3,3:3-3,3-3:18,8,0,0:3,18:NULL:143.671:366.612,131.36:0.0,0.0:0.0,1.81234e-05,0.999985	0/0:47:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:254.878:326.675,113.385:0.0,0.0:0.0,7.89661e-10,1.0
+chr1	4304220	.	CTTCCTTCCTTC	.	.	.	END=4304231;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:244.536:366.612,131.36:0.0,0.0:0.0,2.37142e-06,1.0	0/0:38:0.999578:3,3:2-3,2-3:14,21,0,2:3,14:2,2:262.18:326.675,113.385:0.46122,0.46122:0.0,0.000264883,0.999736
+chr1	4304531	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=4304562;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.00001:7,7:5-7,5-7:22,22,0,8:7,22:3,2|4,2|5,3|6,1:353.905:366.612,131.36:0.410384,0.410384:1.0,1.43191e-06,1.3794e-39	0/0:47:1.00001:8,8:8-8,8-8:22,16,0,9:8,22:3,1|4,1|5,1|6,1|7,5:308.08:326.675,113.385:0.0,0.0:0.0,7.07656e-07,1.0
+chr1	4305067	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4305100;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0445602:29,29:12-31,12-31:0,14,0,14:NULL:5,3|7,1|8,1|9,1|11,2|16,1|17,1|20,1|27,1|28,1|29,1:235.738:366.612,131.36:4.68217,4.68217:2.11204e-37,0.105213,0.894887	0/0:26:0.728765:17,17:16-19,16-19:5,9,0,10:17,5:7,1|9,1|12,1|13,1|15,4|16,2:182.064:326.675,113.385:1.0865,1.0865:3.43413e-08,0.073556,0.926541
+chr1	4307140	.	AATAAAATAAAATAA	.	.	.	END=4307154;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:25,18,0,2:3,25:2,2:272.688:366.612,131.36:0.0,0.0:0.0,9.41783e-08,1.0	0/0:27:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:138.153:326.675,113.385:0.0,0.0:0.0,2.24604e-06,1.0
+chr1	4307673	.	TTGTTGTTGTTG	.	.	.	END=4307684;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:231.194:366.612,131.36:0.0,0.0:0.0,1.69388e-06,1.0	0/0:40:1.0:4,4:3-4,3-4:26,13,0,0:4,26:NULL:228.879:326.675,113.385:0.195027,0.195027:0.0,1.37826e-07,1.0
+chr1	4309252	.	TTTGTTTGTTTGTTTG	.	.	.	END=4309267;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:20,16,0,3:4,20:3,3:246.126:366.612,131.36:0.0,0.0:0.0,2.00039e-06,1.0	0/0:49:1.0:4,4:4-4,4-4:35,9,0,5:4,35:2,3|3,2:261.591:326.675,113.385:0.0,0.0:0.0,1.11506e-10,1.0
+chr1	4312047	.	AATAATAATAAT	AAT	.	.	END=4312058;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0756969:1,1:1-4,1-4:0,18,0,0:NULL:NULL:166.744:366.612,131.36:1.15812,1.15812:0.566582,0.379435,0.0541254	0/0:23:0.999633:4,4:4-4,4-4:15,8,0,0:4,15:NULL:131.449:326.675,113.385:0.0,0.0:0.0,0.000241621,0.999759
+chr1	4315806	.	TTTATTTATTTA	.	.	.	END=4315817;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:18,13,0,0:3,18:NULL:189.952:366.612,131.36:0.0,0.0:0.0,1.03387e-05,0.999993	0/0:16:0.961691:3,3:3-3,3-3:8,8,0,0:3,8:NULL:104.974:326.675,113.385:0.0,0.0:2.31783e-26,0.0214061,0.978636
+chr1	4318869	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	END=4318923;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.998032:7,7:7-7,7-7:13,11,0,0:7,13:NULL:155.431:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.997389:11,11:11-11,11-11:11,11,0,11:11,11:3,1|5,1|8,1|9,3|10,5:224.136:326.675,113.385:0.0,0.0:3.92039e-33,0.00105901,0.998945
+chr1	4328602	.	GTGGGTGGGTGGGTGG	.	.	.	END=4328617;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:4,4:4-4,4-4:27,29,0,0:4,27:NULL:356.43:366.612,131.36:0.0,0.0:0.0,9.63734e-08,1.0	0/0:38:1.0:4,4:4-4,4-4:22,16,0,0:4,22:NULL:233.942:326.675,113.385:0.0,0.0:0.0,4.15676e-06,0.999995
+chr1	4328704	.	ATAAATAAATAA	.	.	.	END=4328715;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:36,14,0,0:3,36:NULL:264.255:366.612,131.36:0.0,0.0:0.0,1.35046e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:197.266:326.675,113.385:0.0,0.0:0.0,6.85972e-06,0.999994
+chr1	4329272	.	TGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=4329291;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.999961:5,5:5-5,5-5:17,12,0,0:5,17:NULL:178.516:366.612,131.36:0.0,0.0:0.0,3.54679e-05,0.999964	0/0:29:0.999204:4,4:3-4,3-4:13,11,0,4:4,13:3,4:178.448:326.675,113.385:0.40582,0.40582:6.01e-43,0.000413943,0.99959
+chr1	4329605	.	GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	GGAAGGGAAGGGAAGGGAAG,GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	.	.	END=4329684;RU=ggaag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00451592:4,4:1-5,1-5:0,6,0,0:NULL:NULL:50.7807:366.612,131.36:1.38953,1.38953:0.539407,0.424989,0.0357611	2/2:1:0.000317116:17,17:17-17,17-17:0,1,0,0:NULL:NULL:8.30332:326.675,113.385:0.0,0.0:0.0516048,0.397132,0.551422
+chr1	4331004	.	AGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4331017;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0229887:22,22:21-24,21-24:0,8,0,3:NULL:6,1|8,1|20,1:96.2491:366.612,131.36:1.14911,1.14911:0.0,0.0,1.0	0/0:29:0.997633:7,7:7-8,7-8:13,15,0,0:7,13:NULL:187.971:326.675,113.385:0.437216,0.437216:1.60787e-27,0.00151059,0.998496
+chr1	4331408	.	TATTATTATTATTATTAT	TAT	.	.	END=4331425;RU=tat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0117972:1,1:1-4,1-4:0,8,0,0:NULL:NULL:78.2954:366.612,131.36:1.13848,1.13848:0.184507,0.538962,0.276614	0/0:20:0.99739:6,6:6-6,6-6:12,6,0,2:6,12:3,1|5,1:120.743:326.675,113.385:0.0,0.0:3.27621e-34,0.00136058,0.998642
+chr1	4365108	.	TCTTTCTTTCTT	.	.	.	END=4365119;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:35,23,0,0:3,35:NULL:349.875:366.612,131.36:0.0,0.0:0.0,2.82414e-10,1.0	0/0:36:1.0:3,3:3-3,3-3:20,13,0,3:3,20:2,3:223.14:326.675,113.385:0.0,0.0:0.0,5.17857e-06,0.999995
+chr1	4367608	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4367649;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:55:0.966374:21,24:20-22,24-24:23,17,0,13:20,2|21,6|22,3|23,3|24,9:6,3|9,1|12,1|16,1|18,1|19,3|20,2|21,1:391.52:366.612,131.36:0.456091,0.0990099:4.87875e-38,1.21687e-06,1.0	0/0:40:0.95915:21,21:11-21,11-21:14,8,0,16:20,3|21,11:10,1|12,1|13,1|14,1|16,2|17,2|19,5|20,3:271.685:326.675,113.385:4.35711,4.35711:1.72038e-11,0.0372044,0.962863
+chr1	4368385	.	CAAACAAACAAACAAA	.	.	.	END=4368400;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999479:4,4:4-4,4-4:14,19,0,2:4,14:3,2:242.427:366.612,131.36:0.0,0.0:0.0,0.000338708,0.999666	0/0:36:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:211.969:326.675,113.385:0.0,0.0:0.0,2.97353e-06,1.0
+chr1	4376870	.	AAATAAAATAAAATA	.	.	.	END=4376884;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999929:3,3:3-3,3-3:17,12,0,0:3,17:NULL:177.043:366.612,131.36:0.0,0.0:0.0,3.89198e-05,0.999963	0/0:16:0.930548:3,3:3-3,3-3:7,9,0,0:3,7:NULL:110.478:326.675,113.385:0.19802,0.19802:1.82652e-23,0.0449047,0.955169
+chr1	4380706	.	ATATACTATACATATACTATACATATACTATAC	ATATACTATAC	.	.	END=4380738;RU=atatactatac;PERIOD=11;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.685505:1,1:1-1,1-1:0,27,0,0:NULL:NULL:261.91:366.612,131.36:0.0,0.0:0.856769,0.140636,0.00268363	0/0:12:0.922507:3,3:3-3,3-3:7,5,0,0:3,7:NULL:74.7609:326.675,113.385:0.0,0.0:1.98248e-09,0.047239,0.952838
+chr1	4381338	.	CTTTCTTTCTTT	.	.	.	END=4381349;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99978:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.896:366.612,131.36:0.0,0.0:0.0,0.000123774,0.999879	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.07:326.675,113.385:0.0,0.0:0.0,8.56297e-08,1.0
+chr1	4383095	.	AAAATAAAATAAAATAAAAT	AAAAT	.	.	END=4383114;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0611241:1,1:1-4,1-4:0,7,0,0:NULL:NULL:62.4723:366.612,131.36:1.40706,1.40706:0.350436,0.489755,0.159858	0/0:22:0.999977:4,4:4-4,4-4:18,4,0,0:4,18:NULL:110.196:326.675,113.385:0.0,0.0:0.0,2.68047e-05,0.999972
+chr1	4388234	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=4388268;RU=ttttg;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999706:5,5:4-5,4-5:15,16,0,5:5,15:2,2|3,2|4,1:243.899:366.612,131.36:0.236383,0.236383:0.999948,5.32144e-05,3.0148e-41	0/0:31:0.99907:7,7:6-7,6-7:13,7,0,10:7,13:2,2|3,3|6,5:184.792:326.675,113.385:0.390807,0.390807:2.42909e-35,0.000341891,0.999659
+chr1	4389924	.	AAACAAACAAAC	.	.	.	END=4389935;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:20,18,0,0:3,20:NULL:238.624:366.612,131.36:0.0,0.0:0.0,3.72101e-06,1.0	0/0:26:0.999743:3,3:3-3,3-3:15,11,0,0:3,15:NULL:155.687:326.675,113.385:0.0,0.0:0.0,0.000163545,0.999841
+chr1	4390516	.	GAGAAGAGAGAAGAGAGAAGA	GAGAAGA	.	.	END=4390536;RU=gagaaga;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.112712:1,1:1-2,1-2:0,16,0,0:NULL:NULL:147.878:366.612,131.36:0.491073,0.491073:0.419702,0.473992,0.106424	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:223.091:326.675,113.385:0.0,0.0:0.0,1.10314e-07,1.0
+chr1	4391542	.	TAAATAAATAAA	.	.	.	END=4391553;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.996426:3,3:3-4,3-4:12,20,0,0:3,12:NULL:236.309:366.612,131.36:0.495841,0.495841:2.13451e-37,0.00220599,0.997799	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:223.19:326.675,113.385:0.0,0.0:0.0,5.08592e-07,1.0
+chr1	4391556	.	AACAACAACAAC	AACAACAACAACAAC	.	.	END=4391567;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.849097:5,5:4-5,4-5:17,19,0,0:4,3|5,14:NULL:257.578:366.612,131.36:0.486863,0.486863:0.0,7.64905e-05,0.999925	0/0:37:1.0:4,4:4-4,4-4:19,14,0,4:4,19:3,4:235.756:326.675,113.385:0.0,0.0:0.0,6.8877e-06,0.999994
+chr1	4394196	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=4394211;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999904:5,5:5-5,5-5:16,11,0,3:5,16:3,1|4,2:192.136:366.612,131.36:0.0,0.0:0.0,2.63456e-05,0.999978	0/0:30:1.00001:4,4:4-4,4-4:20,7,0,3:4,20:2,1|3,2:171.045:326.675,113.385:0.0,0.0:0.0,3.13178e-06,1.0
+chr1	4399750	.	GAACAGAACAGAACA	.	.	.	END=4399764;RU=gaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,16,0,0:3,23:NULL:241.427:366.612,131.36:0.0,0.0:0.0,1.09336e-06,1.0	0/0:28:0.999941:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.316:326.675,113.385:0.0,0.0:0.0,5.14948e-05,0.999949
+chr1	4404415	.	ACCACCACCACCACC	.	.	.	END=4404429;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:22,17,0,4:5,22:3,1|4,3:280.212:366.612,131.36:0.0,0.0:0.0,2.68116e-07,1.0	0/0:35:1.00001:5,5:5-5,5-5:22,11,0,2:5,22:3,1|4,1:204.569:326.675,113.385:0.0,0.0:0.0,1.20117e-06,1.0
+chr1	4413710	.	ATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATAC	.	.	.	END=4413789;RU=atagatac;PERIOD=8;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.166102:10,10:5-10,5-10:2,12,0,8:10,2:2,1|4,4|6,1|7,1|8,1:170.496:366.612,131.36:1.1234,1.1234:5.66557e-06,0.721365,0.27863	0/0:31:0.93962:10,10:10-10,10-10:7,8,0,16:10,7:2,1|3,2|4,1|5,2|6,2|7,4|8,3|9,1:209.782:326.675,113.385:0.0,0.0:9.99768e-20,0.0315962,0.968463
+chr1	4416214	.	AGACAGACAGAC	.	.	.	END=4416225;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.042:366.612,131.36:0.0,0.0:0.0,4.45306e-06,0.999995	0/0:44:1.00001:3,3:3-3,3-3:20,21,0,3:3,20:2,3:296.935:326.675,113.385:0.0,0.0:0.0,2.77719e-06,1.0
+chr1	4417332	.	CATGCATGCATG	.	.	.	END=4417343;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:217.251:366.612,131.36:0.0,0.0:0.0,7.47455e-06,0.999994	0/0:26:0.999984:3,3:3-3,3-3:18,8,0,0:3,18:NULL:147.202:326.675,113.385:0.0,0.0:0.0,2.16373e-05,0.999979
+chr1	4423050	.	TAATTTAATTTAATT	.	.	.	END=4423064;RU=taatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.996592:3,3:3-3,3-3:11,10,0,0:3,11:NULL:135.921:366.612,131.36:0.0,0.0:4.76551e-36,0.00230319,0.997701	0/0:14:0.981437:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.535:326.675,113.385:0.0,0.0:2.28684e-29,0.00902879,0.990993
+chr1	4423239	.	CACACACACACA	CACACACACACACA	.	.	END=4423250;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999994:7,7:7-7,7-7:19,11,0,0:7,19:NULL:174.886:366.612,131.36:0.0,0.0:0.0,8.04436e-06,0.999994	0/0:29:1.00001:6,6:6-6,6-6:23,2,0,4:6,23:5,4:138.927:326.675,113.385:0.0,0.0:0.0,3.36608e-07,1.0
+chr1	4425083	.	CCACCACCACCACCACCA	CCA	.	.	END=4425100;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.108716:1,1:1-1,1-1:0,27,0,0:NULL:NULL:244.089:366.612,131.36:0.139319,0.139319:0.66748,0.30592,0.0266397	0/0:55:1.0:6,6:6-6,6-6:29,20,0,5:6,29:5,5:334.155:326.675,113.385:0.0,0.0:0.0,6.39426e-09,1.0
+chr1	4426093	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4426130;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.271415:27,30:27-28,27-32:3,14,0,12:27,3:7,2|8,1|9,1|10,1|14,1|16,1|17,1|23,1|26,2|29,1:245.354:366.612,131.36:0.537761,1.20589:0.0,0.0,1.0	0/3:37:0.283368:19,34:19-19,19-34:15,9,0,10:18,3|19,12:8,1|12,1|13,1|15,1|16,1|18,3|19,1|32,1:249.377:326.675,113.385:0.0,6.86953:1.57146e-22,1.97878e-05,0.99998
+chr1	4426860	.	AAACAAACAAAC	.	.	.	END=4426871;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999805:3,3:3-3,3-3:15,17,0,0:3,15:NULL:216.953:366.612,131.36:0.0,0.0:0.0,8.43516e-05,0.999918	0/0:22:0.999963:3,3:3-3,3-3:17,5,0,0:3,17:NULL:118.047:326.675,113.385:0.0,0.0:0.0,3.00444e-05,0.999971
+chr1	4429409	.	CCACCACCACCA	.	.	.	END=4429420;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:30,17,0,0:4,30:NULL:267.832:366.612,131.36:0.0,0.0:0.0,8.387e-09,1.0	0/0:42:1.0:4,4:4-4,4-4:29,12,0,0:4,29:NULL:225.644:326.675,113.385:0.139319,0.139319:0.0,2.04925e-08,1.0
+chr1	4429719	.	GTGTGTGTGTGT	GTGTGTGT	.	.	END=4429730;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.990269:4,4:4-6,4-6:11,18,0,0:4,11:NULL:206.913:366.612,131.36:0.863148,0.863148:0.997246,0.00275907,6.92527e-21	0/0:25:0.999978:6,6:6-6,6-6:19,6,0,0:6,19:NULL:131.122:326.675,113.385:0.0,0.0:6.31465e-34,1.52283e-05,0.999986
+chr1	4429733	.	GAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=4429752;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.979729:8,8:8-8,8-8:10,13,0,0:8,10:NULL:160.169:366.612,131.36:0.139319,0.139319:0.99593,0.00407977,1.80434e-17	0/0:32:0.955031:10,10:10-11,10-11:21,8,0,3:10,18|11,3:5,1|8,1|9,1:192.258:326.675,113.385:0.412766,0.412766:3.22241e-26,5.15855e-06,0.999995
+chr1	4430764	.	ATGAATGAATGAATGAATGAATGAATGAATGA	ATGAATGAATGAATGAATGAATGAATGAATGAATGA	.	.	END=4430795;RU=atga;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999375:9,9:9-9,9-9:14,15,0,11:9,14:2,1|3,1|4,1|5,2|6,1|7,1|8,4:274.613:366.612,131.36:0.0,0.0:0.0,2.02402e-05,0.99998	0/0:31:1.0:8,8:8-8,8-8:19,6,0,6:8,19:2,1|3,1|7,4:179.494:326.675,113.385:0.0,0.0:0.0,4.54047e-06,0.999995
+chr1	4434303	.	TATATATATATA	TATATATATATATATATA,TATATATATATATATATATATATA	.	.	END=4434314;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.974761:9,12:9-13,12-12:12,13,0,0:9,2|12,10:NULL:177.35:366.612,131.36:1.49377,0.0:0.0,0.0,1.0	0/0:25:0.916793:6,6:5-7,5-7:7,14,0,2:6,7:5,2:175.812:326.675,113.385:0.531343,0.531343:4.91889e-09,0.0459664,0.954107
+chr1	4435269	.	CAATCAATCAAT	.	.	.	END=4435280;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:228.273:366.612,131.36:0.0,0.0:0.0,4.80746e-07,1.0	0/0:32:0.999981:3,3:3-3,3-3:18,12,0,2:3,18:2,2:189.296:326.675,113.385:0.0,0.0:0.0,1.38634e-05,0.999987
+chr1	4448845	.	CTGCCTGCCTGC	.	.	.	END=4448856;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999965:3,3:3-3,3-3:17,22,0,4:3,17:2,4:297.44:366.612,131.36:0.0,0.0:0.0,1.88329e-05,0.999985	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:162.143:326.675,113.385:0.0,0.0:0.0,1.34186e-06,1.0
+chr1	4449017	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4449072;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:51:0.914811:15,16:15-15,15-16:10,21,0,20:15,8|16,2:2,2|3,1|4,1|5,2|7,2|9,2|10,1|12,3|13,2|14,3|15,1:398.823:366.612,131.36:0.0,0.491073:0.0,4.19426e-05,0.999957	0/0:47:0.968477:14,14:11-15,11-15:8,18,0,19:14,8:2,1|3,3|4,1|6,3|7,1|8,2|9,2|10,1|12,2|13,3:341.121:326.675,113.385:1.35177,1.35177:1.51877e-16,0.0150207,0.985009
+chr1	4450115	.	ATATATATATAT	ATATATATAT	.	.	END=4450126;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:21:1.0:5,6:4-5,5-7:11,8,0,0:5,5|6,6:NULL:122.639:366.612,131.36:0.342408,0.372309:1.28879e-08,1.0,4.9555e-08	0/0:31:0.997716:6,6:5-6,5-6:13,17,0,0:6,13:NULL:201.31:326.675,113.385:0.334882,0.334882:6.22094e-24,0.00170779,0.998299
+chr1	4451210	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4451261;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:46:0.632992:22,26:22-28,26-28:15,11,0,19:21,2|22,4|24,3|26,6:6,1|8,1|9,1|11,1|12,2|14,1|18,2|19,1|20,1|21,3|22,3|23,1|28,1:360.671:366.612,131.36:2.73257,1.06305:6.07213e-07,0.865972,0.134122	0/2:45:0.887578:26,27:11-27,11-27:10,11,0,22:25,3|26,4|27,3:5,3|6,1|7,1|8,1|9,2|14,1|16,1|19,3|20,2|22,2|23,2|24,3:331.719:326.675,113.385:5.24564,6.06172:5.90559e-07,0.101421,0.898681
+chr1	4451385	.	TTGTTTTGTTTTGTT	.	.	.	END=4451399;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:21,31,0,0:3,21:NULL:354.695:366.612,131.36:0.0,0.0:0.0,5.06123e-06,0.999995	0/0:35:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.192:326.675,113.385:0.0,0.0:0.0,1.28186e-05,0.999987
+chr1	4451409	.	TCTGTCTGTCTG	.	.	.	END=4451420;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,27,0,0:3,29:NULL:353.468:366.612,131.36:0.0,0.0:0.0,2.236e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:233.131:326.675,113.385:0.0,0.0:0.0,1.73914e-07,1.0
+chr1	4453062	.	GGAGGGAGGGAG	.	.	.	END=4453073;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.998932:3,3:3-3,3-3:14,24,0,0:3,14:NULL:276.614:366.612,131.36:0.0,0.0:0.0,0.000780357,0.999225	0/0:36:1.00001:3,3:3-3,3-3:21,13,0,2:3,21:2,2:214.931:326.675,113.385:0.0,0.0:0.0,1.49998e-06,1.0
+chr1	4454884	.	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	.	.	END=4454995;RU=cctgctg;PERIOD=7;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:54:0.777954:6,16:6-13,12-16:6,24,0,18:6,2|10,2|14,2:2,1|3,2|5,4|6,1|7,1|8,1|10,1|11,1|12,3|13,1|16,2:417.147:366.612,131.36:1.93807,1.59992:3.3098e-10,1.0,1.04847e-27	2/3:59:0.999114:14,19:10-16,3-21:10,21,1,24:10,3|14,3|16,4:2,2|3,3|4,1|5,1|6,1|9,1|11,2|12,2|13,1|14,5|15,4|16,1:535.961:326.675,113.385:2.21278,4.46079:0.0,1.0,2.26331e-06
+chr1	4461472	.	GAAGGGAAGGGAAGGGAAGG	GAAGG	.	.	END=4461491;RU=gaagg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.00377504:1,1:1-5,1-5:0,3,0,0:NULL:NULL:26.5218:366.612,131.36:0.780108,0.780108:0.0267453,0.388297,0.585074	0/0:40:1.0:4,4:4-4,4-4:24,13,0,3:4,24:3,3:239.676:326.675,113.385:0.0,0.0:0.0,2.98127e-07,1.0
+chr1	4462221	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4462246;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0549007:24,24:24-26,24-26:0,11,0,8:NULL:4,1|5,1|10,1|13,1|15,1|20,1|24,2:161.879:366.612,131.36:0.592738,0.592738:0.0,0.0,1.0	0/0:47:0.646146:13,13:13-17,13-17:27,12,0,8:12,2|13,23|14,2:8,1|9,2|10,2|11,1|12,1|17,1:311.76:326.675,113.385:1.82404,1.82404:2.00885e-34,2.38216e-06,1.0
+chr1	4467043	.	ATAAATAAATAA	.	.	.	END=4467054;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999958:3,3:3-3,3-3:17,21,0,2:3,17:2,2:278.905:366.612,131.36:0.0,0.0:0.0,3.44744e-05,0.999965	0/0:35:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.454:326.675,113.385:0.0,0.0:0.0,1.14046e-05,0.999988
+chr1	4467845	.	TTGTTTGTTTGTTTGT	.	.	.	END=4467860;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.953266:4,4:4-4,4-4:7,10,0,4:4,7:3,4:149.755:366.612,131.36:0.0,0.0:5.79576e-24,0.019206,0.980836	0/0:32:0.99997:4,4:4-4,4-4:18,14,0,0:4,18:NULL:199.375:326.675,113.385:0.0,0.0:0.0,3.81478e-05,0.999964
+chr1	4468187	.	ATCATCATCATC	.	.	.	END=4468198;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:23,11,0,2:4,23:3,2:207.549:366.612,131.36:0.0,0.0:0.0,5.2263e-07,1.0	0/0:37:1.00001:4,4:4-4,4-4:22,15,0,0:4,22:NULL:227.915:326.675,113.385:0.0,0.0:0.0,3.11186e-06,1.0
+chr1	4469245	.	CACACACACACACACACA	.	.	.	END=4469262;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:9,9:9-9,9-9:26,11,0,3:9,26:7,1|8,2:236.579:366.612,131.36:0.19802,0.19802:4.37e-43,1.08494e-07,1.0	0/0:47:1.00001:9,9:9-9,9-9:21,20,0,5:9,21:5,1|6,1|8,3:310.661:326.675,113.385:0.0,0.0:3.32615e-35,1.90036e-06,1.0
+chr1	4471019	.	AGCCAGCCAGCC	.	.	.	END=4471030;RU=agcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,12,0,2:3,20:2,2:201.95:366.612,131.36:0.0,0.0:0.0,2.25541e-06,1.0	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:224.631:326.675,113.385:0.0,0.0:0.0,6.74975e-07,1.0
+chr1	4472443	.	TGTGTGTGTGTGTG	.	.	.	END=4472456;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999899:7,7:7-7,7-7:17,14,0,0:7,17:NULL:202.743:366.612,131.36:0.0,0.0:5.0226e-40,6.89604e-05,0.999933	0/0:38:1.0:7,7:7-7,7-7:23,11,0,4:7,23:5,2|6,2:226.914:326.675,113.385:0.0,0.0:0.0,3.91387e-07,1.0
+chr1	4473588	.	TTTGTTTGTTTG	.	.	.	END=4473599;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:267.43:366.612,131.36:0.0,0.0:0.0,8.19186e-09,1.0	0/0:45:1.0:3,3:3-3,3-3:29,13,0,3:3,29:2,3:253.947:326.675,113.385:0.0,0.0:0.0,6.24976e-09,1.0
+chr1	4475372	.	GTTGGTTGGTTG	.	.	.	END=4475383;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:0.999993:3,3:3-3,3-3:19,31,0,0:3,19:NULL:352.768:366.612,131.36:0.0,0.0:0.0,1.81628e-05,0.999985	0/0:58:1.0:3,3:3-3,3-3:24,32,0,2:3,24:2,2:399.093:326.675,113.385:0.0,0.0:0.0,6.3523e-07,1.0
+chr1	4475462	.	TGGTTGGTTGGT	.	.	.	END=4475473;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999904:3,3:3-3,3-3:17,28,0,0:3,17:NULL:328.445:366.612,131.36:0.0,0.0:0.0,9.22666e-05,0.99991	0/0:44:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:294.213:326.675,113.385:0.0,0.0:0.0,5.04333e-06,0.999995
+chr1	4476345	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	END=4476384;RU=ggaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999495:9,9:9-9,9-9:14,12,0,4:9,14:3,1|8,3:203.82:366.612,131.36:0.0,0.0:0.999667,0.000333038,6.32498e-26	0/0:31:0.996083:10,10:10-10,10-10:11,10,0,10:10,11:2,1|5,1|7,2|9,6:209.801:326.675,113.385:0.0,0.0:2.03327e-31,0.0011957,0.998808
+chr1	4476816	.	CCCTCCCTCCCTCCCT	CCCTCCCTCCCT	.	.	END=4476831;RU=ccct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.153545:3,3:2-4,2-4:0,21,0,3:NULL:3,3:212.852:366.612,131.36:0.46881,0.46881:0.281163,0.517279,0.201561	0/0:23:0.966917:4,4:4-4,4-4:9,14,0,0:4,9:NULL:168.071:326.675,113.385:0.0,0.0:6.6534e-14,0.0255635,0.974488
+chr1	4477626	.	TAAATAAATAAA	.	.	.	END=4477637;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:27,20,0,0:3,27:NULL:295.899:366.612,131.36:0.0,0.0:0.0,9.2065e-08,1.0	0/0:38:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:197.046:326.675,113.385:0.0,0.0:0.0,1.8844e-08,1.0
+chr1	4490091	.	AACAACAACAACAACAACAAC	.	.	.	END=4490111;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99516:7,7:7-7,7-7:11,8,0,3:7,11:3,1|4,1|6,1:138.756:366.612,131.36:0.0,0.0:4.41312e-30,0.00219522,0.997813	0/0:25:0.999329:7,7:7-7,7-7:14,8,0,3:7,14:4,1|5,1|6,1:155.084:326.675,113.385:0.0,0.0:4.45758e-38,0.000267166,0.999735
+chr1	4491987	.	TGCTGCTGCTGC	.	.	.	END=4491998;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999887:4,4:4-4,4-4:17,20,0,0:4,17:NULL:250.469:366.612,131.36:0.0,0.0:0.0,8.49653e-05,0.999917	0/0:29:0.999976:4,4:4-4,4-4:18,11,0,0:4,18:NULL:174.657:326.675,113.385:0.0,0.0:0.0,3.28594e-05,0.99997
+chr1	4500015	.	ATAATAATAATA	.	.	.	END=4500026;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:27,28,0,0:4,27:NULL:370.374:366.612,131.36:0.0,0.0:0.0,1.39988e-07,1.0	0/0:38:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:226.75:326.675,113.385:0.0,0.0:0.0,2.00146e-06,1.0
+chr1	4500558	.	ACATACATACAT	.	.	.	END=4500569;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:264.928:366.612,131.36:0.0990099,0.0990099:0.0,4.35992e-10,1.0	0/0:25:0.99975:3,3:3-3,3-3:15,10,0,0:3,15:NULL:153.146:326.675,113.385:0.0,0.0:3.50738e-38,0.000171094,0.999833
+chr1	4500614	.	AATAAATAAATA	.	.	.	END=4500625;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999964:3,3:3-3,3-3:18,11,0,0:3,18:NULL:177.338:366.612,131.36:0.0,0.0:0.0,3.26547e-05,0.999971	0/0:25:0.999519:3,3:3-3,3-3:14,11,0,0:3,14:NULL:157.545:326.675,113.385:0.0,0.0:1.93e-43,0.000309201,0.999691
+chr1	4501653	.	GTAGTAGTAGTAGTA	.	.	.	END=4501667;RU=gta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:5-5,5-5:21,11,0,0:5,21:NULL:187.389:366.612,131.36:0.0,0.0:0.0,3.62527e-06,1.0	0/0:32:0.999994:5,5:4-5,4-5:19,10,0,2:5,19:4,2:184.127:326.675,113.385:0.195027,0.195027:0.0,1.32039e-05,0.999987
+chr1	4509810	.	TGTGTGTGTGTG	.	.	.	END=4509821;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.00001:6,6:6-8,6-8:42,19,0,2:6,42:5,1|7,1:373.597:366.612,131.36:0.598989,0.598989:0.0,1.67446e-12,1.0	0/0:117:1.0:6,6:6-9,6-9:100,11,0,2:4,2|6,96|7,2:5,1|7,1:542.75:326.675,113.385:0.771007,0.771007:0.0,3.3599e-26,1.0
+chr1	4510185	.	TATTTATTTATT	.	.	.	END=4510196;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:221.005:366.612,131.36:0.0,0.0:0.0,6.7528e-07,1.0	0/0:36:0.999994:3,3:3-3,3-3:19,17,0,0:3,19:NULL:222.763:326.675,113.385:0.0,0.0:0.0,1.3827e-05,0.999987
+chr1	4510496	.	GAAGAAGAAGAAGAAGAA	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=4510513;RU=gaa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0382175:14,14:13-17,13-17:0,8,0,5:NULL:8,1|10,1|11,1|14,2:113.132:366.612,131.36:1.00025,1.00025:0.0,0.0,1.0	0/0:29:1.0:6,6:6-6,6-6:20,9,0,0:6,20:NULL:161.976:326.675,113.385:0.0,0.0:0.0,8.88947e-06,0.999994
+chr1	4510513	.	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	.	.	END=4510542;RU=agg;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0515067:12,12:12-15,12-15:0,6,0,7:NULL:4,2|7,2|10,1|11,1|12,1:110.798:366.612,131.36:1.40594,1.40594:0.0,0.0,1.0	0/0:30:0.99965:10,10:10-10,10-10:15,10,0,5:10,15:4,1|6,3|8,1:189.774:326.675,113.385:0.0,0.0:4e-45,0.000222649,0.999781
+chr1	4512324	.	AACAAAACAAAACAA	.	.	.	END=4512338;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998922:3,3:3-4,3-4:14,18,0,3:3,14:2,3:242.475:366.612,131.36:0.452422,0.452422:1e-45,0.000483448,0.999521	0/0:28:0.998154:3,3:3-4,3-4:12,13,0,2:3,12:2,2:178.278:326.675,113.385:0.484441,0.484441:1.24142e-39,0.00100998,0.998991
+chr1	4514924	.	TTGGTTGGTTGG	.	.	.	END=4514935;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999946:3,3:3-3,3-3:16,21,0,4:3,16:2,3|3,1:284.082:366.612,131.36:0.0,0.0:0.0,1.97494e-05,0.99998	0/0:37:1.0:3,3:3-3,3-3:27,8,0,2:3,27:2,2:196.928:326.675,113.385:0.0,0.0:0.0,2.16884e-08,1.0
+chr1	4515460	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4515507;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.684135:26,27:25-26,24-27:10,15,0,11:25,2|26,6|27,2:6,1|7,1|8,1|11,1|14,2|16,2|18,1|21,2:281.402:366.612,131.36:0.363246,0.786989:1.3169e-16,0.00404163,0.995968	0/0:33:0.584003:24,24:16-24,16-24:14,7,0,10:23,5|24,9:9,1|11,2|14,3|18,1|19,1|21,1|22,1:216.042:326.675,113.385:3.21674,3.21674:6.79599e-08,0.413248,0.586829
+chr1	4515925	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4515960;RU=gttt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:1.00001:7,7:5-7,5-7:20,18,0,8:7,20:2,1|4,1|6,6:306.672:366.612,131.36:0.339533,0.339533:1.0,2.28116e-06,0.0	0/0:62:1.0:9,9:9-9,9-9:28,19,0,15:9,28:3,2|5,1|6,2|8,10:398.289:326.675,113.385:0.0,0.0:0.0,1.04606e-08,1.0
+chr1	4517194	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	END=4517241;RU=aata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.99183:11,11:11-11,11-11:11,12,0,10:11,11:3,2|4,1|5,1|6,2|7,2|8,2:228.232:366.612,131.36:0.0,0.0:0.997852,0.00215301,3.01162e-19	0/0:29:0.947807:12,12:12-12,12-12:7,12,0,10:12,7:3,1|4,1|5,1|6,2|11,5:206.508:326.675,113.385:0.0,0.0:4.58471e-16,0.0210618,0.978979
+chr1	4517464	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4517491;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.989754:19,19:19-23,19-23:15,14,0,13:18,2|19,13:5,1|6,1|8,1|10,3|12,1|13,2|15,3|16,1:305.876:366.612,131.36:1.53858,1.53858:0.0,0.0,1.0	0/0:37:0.846884:14,14:13-15,13-15:16,7,0,13:13,2|14,12|15,2:6,1|7,1|8,3|9,3|10,3|11,1|13,1:242.078:326.675,113.385:0.495247,0.495247:3.39869e-16,0.00271662,0.997291
+chr1	4519236	.	TTTTGTTTTGTTTTG	.	.	.	END=4519250;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999986:3,3:3-3,3-3:18,23,0,0:3,18:NULL:280.201:366.612,131.36:0.0,0.0:0.0,2.30958e-05,0.999979	0/0:35:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:223.843:326.675,113.385:0.0,0.0:0.0,2.45399e-05,0.999978
+chr1	4522379	.	TTTGTTTGTTTG	.	.	.	END=4522390;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.447837:3,3:1-3,1-3:3,11,0,0:3,3:NULL:106.851:366.612,131.36:0.339533,0.339533:1.14479e-10,0.29444,0.705567	0/0:22:0.995174:3,3:3-3,3-3:11,11,0,0:3,11:NULL:142.451:326.675,113.385:0.0,0.0:1.64583e-36,0.00271403,0.997292
+chr1	4527121	.	TATATATATATATATATA	.	.	.	END=4527138;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.236118:9,9:9-9,9-9:2,0,0,0:9,2:NULL:8.24721:366.612,131.36:0.0,0.0:0.000905115,0.37211,0.627037	0/0:5:0.278082:9,9:5-9,5-9:3,1,0,0:9,3:NULL:22.0666:326.675,113.385:1.79052,1.79052:5.24669e-05,0.502426,0.497538
+chr1	4527198	.	ATATATATATATATATATAT	AT	.	.	END=4527217;RU=at;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:8:0.33062:10,10:9-11,9-11:3,3,0,0:10,3:NULL:39.0087:326.675,113.385:0.741055,0.741055:5.23093e-05,0.359284,0.640709
+chr1	4528748	.	CACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=4528795;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:55:0.99964:16,16:11-16,11-16:17,20,0,17:16,17:5,1|7,2|8,3|9,1|10,2|11,2|12,3|14,1|15,2:388.295:366.612,131.36:0.848833,0.848833:1.0,0.0,0.0	0/0:33:0.9829:24,24:24-24,24-24:10,9,0,13:24,10:5,1|7,1|8,1|9,1|16,2|18,1|19,1|21,1|23,4:237.715:326.675,113.385:0.0990099,0.0990099:5.91749e-13,0.0046174,0.995394
+chr1	4529762	.	GGGTGGGTGGGT	.	.	.	END=4529773;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.870944:3,3:3-3,3-3:6,5,0,0:3,6:NULL:67.1805:366.612,131.36:0.0,0.0:2.05362e-17,0.0642545,0.935837	0/0:20:0.865018:3,3:3-3,3-3:6,14,0,0:3,6:NULL:151.244:326.675,113.385:0.19802,0.19802:2.29599e-17,0.0763372,0.92376
+chr1	4530947	.	GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	GAGG,GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	.	.	END=4531030;RU=gagg;PERIOD=4;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	2/2:3:0.0358677:9,9:7-9,7-9:0,0,0,3:NULL:7,1|8,1|9,1:21.8276:326.675,113.385:0.540307,0.540307:1.0,0.0,0.0
+chr1	4533708	.	AAACAAACAAAC	AAAC	.	.	END=4533719;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.999983:3,3:3-3,3-3:18,8,0,0:3,18:NULL:148.323:326.675,113.385:0.0,0.0:0.0,2.30936e-05,0.999979
+chr1	4536587	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4536616;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.479008:25,25:23-29,23-29:7,5,0,14:24,2|25,5:6,2|7,3|8,2|10,1|13,1|14,1|19,2|22,1|23,1:190.956:366.612,131.36:2.46314,2.46314:0.0,0.0,1.0	0/0:45:0.99191:15,15:14-16,14-16:22,15,0,8:13,2|14,2|15,16|16,2:5,1|7,2|9,1|11,2|13,1|14,1:313.078:326.675,113.385:0.409188,0.409188:8.50151e-21,0.00223313,0.997775
+chr1	4537486	.	CCCACCCACCCA	.	.	.	END=4537497;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,12,0,0:3,30:NULL:228.608:366.612,131.36:0.0,0.0:0.0,5.14401e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:28,6,0,0:3,28:NULL:165.859:326.675,113.385:0.0,0.0:0.0,1.44741e-08,1.0
+chr1	4539497	.	AAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4539516;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.999962:5,5:4-5,4-5:18,17,0,2:5,18:2,1|3,1:242.545:366.612,131.36:0.195027,0.195027:0.0,3.80167e-05,0.999964	0/0:33:1.00001:4,4:4-4,4-4:21,8,0,4:4,21:2,1|3,3:181.496:326.675,113.385:0.0,0.0:0.0,1.42155e-06,1.0
+chr1	4540447	.	TTTATTTTATTTTAT	.	.	.	END=4540461;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.578:366.612,131.36:0.0,0.0:0.0,3.02473e-06,1.0	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:142.828:326.675,113.385:0.0,0.0:0.0,5.00032e-06,0.999995
+chr1	4542382	.	AAGAAAGAAAGA	.	.	.	END=4542393;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:142.975:366.612,131.36:0.0,0.0:0.0,1.05021e-06,1.0	0/0:16:0.995299:3,3:3-3,3-3:11,5,0,0:3,11:NULL:86.14:326.675,113.385:0.0,0.0:1.94761e-37,0.00231251,0.997693
+chr1	4543194	.	TTATTATTATTA	.	.	.	END=4543205;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999995:4,4:4-4,4-4:20,13,0,0:4,20:NULL:200.318:366.612,131.36:0.0,0.0:0.0,1.19973e-05,0.999987	0/0:24:0.999571:4,4:4-4,4-4:15,9,0,0:4,15:NULL:145.931:326.675,113.385:0.0,0.0:3.91876e-40,0.000276912,0.999727
+chr1	4544564	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4544591;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.99878:6,6:6-6,6-6:13,19,0,2:6,13:3,1|4,1:244.016:366.612,131.36:0.0,0.0:0.999628,0.000375309,2.56771e-31	0/0:24:0.994105:7,7:7-7,7-7:11,10,0,3:7,11:3,2|6,1:159.312:326.675,113.385:0.0,0.0:7.66103e-37,0.00394,0.996072
+chr1	4545765	.	ACACACACACAC	ACACACACACACACAC	.	.	END=4545776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:1.00001:8,8:8-8,8-8:20,26,0,7:8,20:5,1|6,2|7,4:381.986:366.612,131.36:0.0,0.0:0.0,7.87563e-08,1.0	0/0:54:1.0:6,6:6-6,6-6:33,18,0,3:6,33:4,1|5,2:325.214:326.675,113.385:0.0,0.0:0.0,4.0991e-10,1.0
+chr1	4547787	.	AGGAGGAGGAGG	.	.	.	END=4547798;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:28,18,0,0:4,28:NULL:285.577:366.612,131.36:0.0,0.0:0.0,7.32086e-08,1.0	0/0:37:1.0:4,4:4-4,4-4:28,9,0,0:4,28:NULL:190.861:326.675,113.385:0.0,0.0:0.0,3.96374e-08,1.0
+chr1	4556934	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT	.	.	END=4556979;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:34:0.833758:23,23:21-23,21-23:7,12,0,13:23,7:5,1|6,1|7,1|9,2|10,1|11,1|12,1|13,1|15,1|19,1|20,1|22,1:246.824:326.675,113.385:0.673849,0.673849:9.5259e-08,0.0841745,0.915921
+chr1	4566916	.	GGGTGGGTGGGT	.	.	.	END=4566927;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.567369:3,3:2-3,2-3:4,8,0,0:3,4:NULL:85.089:366.612,131.36:0.48221,0.48221:3.09765e-11,0.190045,0.810013	0/0:33:0.760216:3,3:3-3,3-3:5,28,0,0:3,5:NULL:259.804:326.675,113.385:0.0,0.0:1.50785e-13,0.153551,0.846528
+chr1	4567644	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4567655;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0338735:22,22:19-22,19-22:0,0,0,12:NULL:4,1|6,2|7,1|9,1|14,1|16,1|18,1|19,3|22,1:95.6448:366.612,131.36:1.4827,1.4827:0.0,0.000460747,0.999544	0/0:28:0.999936:6,6:6-6,6-6:17,8,0,3:6,17:4,1|5,2:171.094:326.675,113.385:0.0,0.0:1.44138e-40,3.13488e-05,0.999971
+chr1	4569841	.	TTGTTTGTTTGT	TTGTTTGTTTGTTTGT	.	.	END=4569852;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.00001:4,4:4-4,4-4:22,17,0,3:4,22:3,3:260.7:366.612,131.36:0.0,0.0:0.0,3.04953e-07,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:191.967:326.675,113.385:0.0,0.0:0.0,5.36049e-07,1.0
+chr1	4571456	.	AAACAAACAAAC	.	.	.	END=4571467;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999049:3,3:2-3,2-3:13,20,0,2:3,13:2,2:245.581:366.612,131.36:0.469019,0.469019:5.38e-43,0.000642941,0.999362	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:240.533:326.675,113.385:0.0,0.0:0.0,9.15509e-08,1.0
+chr1	4578817	.	ATTGCATTGCATTGC	.	.	.	END=4578831;RU=attgc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:22,16,0,0:3,22:NULL:233.183:366.612,131.36:0.0,0.0:0.0,1.90477e-06,1.0	0/0:36:1.0:3,3:2-3,2-3:23,10,0,2:3,23:2,2:194.365:326.675,113.385:0.323567,0.323567:0.0,5.35587e-07,1.0
+chr1	4579277	.	ACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=4579306;RU=ac;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:43:0.939866:18,19:18-19,19-19:9,17,0,17:18,4|19,5:4,1|7,1|8,2|9,3|11,1|12,1|13,3|14,3|15,1|18,1:339.652:366.612,131.36:0.442564,0.139319:0.0,0.0,1.0	0/0:42:0.980888:15,15:14-16,14-16:19,14,0,9:14,3|15,14|16,2:5,1|6,1|7,2|9,1|12,1|14,3:302.927:326.675,113.385:0.441011,0.441011:1.26407e-17,0.00565926,0.994354
+chr1	4580702	.	ATTTATTTATTT	ATTT	.	.	END=4580713;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.125985:1,1:1-2,1-2:0,24,0,0:NULL:NULL:234.882:366.612,131.36:0.499779,0.499779:0.445043,0.463997,0.0911081	0/0:37:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.636:326.675,113.385:0.139319,0.139319:0.0,1.64117e-07,1.0
+chr1	4581133	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4581176;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.297711:29,38:28-29,23-39:7,14,0,12:28,3|29,4:4,1|7,1|9,1|16,1|18,3|19,2|23,1|29,1|37,1:263.144:366.612,131.36:0.695188,6.28375:0.0,6.17484e-08,1.0	0/0:40:0.480372:22,22:21-22,21-22:8,13,0,19:21,3|22,5:5,3|7,1|8,1|9,1|11,1|12,1|13,4|15,1|16,1|18,1|20,2|21,1|22,1:307.642:326.675,113.385:0.492866,0.492866:1.39042e-12,0.48673,0.513336
+chr1	4581630	.	AATTAATTAATT	.	.	.	END=4581641;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:187.918:366.612,131.36:0.0,0.0:0.0,3.38291e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.98:326.675,113.385:0.0,0.0:0.0,6.67178e-07,1.0
+chr1	4599798	.	TTTGTTTTGTTTTGT	.	.	.	END=4599812;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:0.999999:3,3:3-3,3-3:20,35,0,0:3,20:NULL:397.608:366.612,131.36:0.0,0.0:0.0,1.02541e-05,0.999993	0/0:36:0.999927:3,3:3-3,3-3:17,19,0,0:3,17:NULL:237.147:326.675,113.385:0.0,0.0:0.0,6.69849e-05,0.999934
+chr1	4602828	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=4602885;RU=ct;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.0249419:24,28:7-29,13-29:0,14,0,8:NULL:9,1|11,2|13,2|16,1|24,1|28,1:190.043:366.612,131.36:6.72884,4.25337:0.29436,0.659006,0.0467059	0/0:22:0.585198:29,29:28-30,28-30:7,10,0,4:28,2|29,5:4,1|5,1|8,1|15,1:162.432:326.675,113.385:0.659736,0.659736:1.82059e-05,0.345316,0.654699
+chr1	4603083	.	CCTCCCCTCCCCTCC	.	.	.	END=4603097;RU=cctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.99967:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.501:366.612,131.36:0.0,0.0:0.0,0.000205378,0.999796	0/0:32:0.999994:3,3:3-3,3-3:19,13,0,0:3,19:NULL:188.353:326.675,113.385:0.0,0.0:0.0,1.20483e-05,0.999987
+chr1	4608057	.	GGGTGGGTGGGT	.	.	.	END=4608068;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.880045:3,3:3-3,3-3:6,17,0,0:3,6:NULL:173.037:366.612,131.36:0.0,0.0:1.75633e-18,0.0713738,0.92872	0/0:30:0.996315:3,3:3-3,3-3:11,19,0,0:3,11:NULL:212.434:326.675,113.385:0.0,0.0:8.84134e-33,0.00266666,0.997343
+chr1	4612833	.	TATTTATTTATT	.	.	.	END=4612844;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999731:3,3:3-3,3-3:15,19,0,0:3,15:NULL:237.486:366.612,131.36:0.0,0.0:0.0,0.000187178,0.999812	0/0:30:0.999638:3,3:3-3,3-3:14,14,0,2:3,14:2,2:198.623:326.675,113.385:0.0,0.0:0.0,0.000219158,0.999781
+chr1	4613348	.	AAATAAATAAATAAAT	.	.	.	END=4613363;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:25,18,0,3:4,25:2,1|3,2:288.879:366.612,131.36:0.0,0.0:0.0,1.33209e-07,1.0	0/0:40:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:250.85:326.675,113.385:0.0,0.0:0.0,2.46058e-06,1.0
+chr1	4618031	.	CTCTCTCTCTCT	.	.	.	END=4618042;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999981:6,6:6-6,6-6:18,18,0,2:6,18:5,2:248.094:366.612,131.36:0.139319,0.139319:7.7e-44,1.47598e-05,0.999987	0/0:46:1.0:6,6:6-6,6-6:34,9,0,3:6,34:4,1|5,2:244.385:326.675,113.385:0.0,0.0:0.0,2.11434e-10,1.0
+chr1	4618737	.	GTTTGTTTGTTTGTTT	.	.	.	END=4618752;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999742:4,4:4-4,4-4:16,11,0,2:4,16:2,1|3,1:178.008:366.612,131.36:0.0,0.0:0.0,0.000134948,0.999865	0/0:32:1.0:4,4:4-4,4-4:23,9,0,0:4,23:NULL:176.817:326.675,113.385:0.0,0.0:0.0,8.71602e-07,1.0
+chr1	4619846	.	ACCACCACCACC	.	.	.	END=4619857;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999951:4,4:4-4,4-4:17,13,0,2:4,17:3,2:207.956:366.612,131.36:0.0,0.0:0.0,2.92333e-05,0.999971	0/0:32:0.999638:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.883:326.675,113.385:0.0,0.0:0.0,0.000296661,0.999705
+chr1	4619861	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	.	END=4619904;RU=tcca;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999879:11,11:11-11,11-11:17,12,0,0:11,17:NULL:190.814:366.612,131.36:0.0,0.0:8.87201e-36,8.94935e-05,0.999911	0/0:44:0.987388:11,11:10-11,10-11:9,19,0,15:11,9:3,2|4,1|5,1|6,1|7,2|8,4|9,2|10,2:319.568:326.675,113.385:0.45695,0.45695:4.95012e-19,0.00840036,0.991621
+chr1	4620573	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4620612;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.98897:22,22:22-23,22-23:11,14,0,17:22,11:9,1|10,2|11,1|12,2|13,1|14,1|15,1|16,4|21,4:323.128:366.612,131.36:0.253975,0.253975:0.0,0.00022719,0.999774	0/0:57:0.840529:20,20:19-20,19-20:21,24,0,11:19,6|20,15:6,2|9,1|10,1|11,1|12,1|15,2|16,1|19,2:414.162:326.675,113.385:0.382696,0.382696:1.23218e-12,0.15951,0.840564
+chr1	4621359	.	TTTTTTCTTTTTTCTTTTTTC	.	.	.	END=4621379;RU=ttttttc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998551:3,3:3-3,3-3:12,16,0,2:3,12:2,2:211.688:366.612,131.36:0.0,0.0:2.06014e-39,0.000943101,0.999059	0/0:45:1.0:3,3:3-3,3-3:24,21,0,0:3,24:NULL:289.748:326.675,113.385:0.0,0.0:0.0,8.82954e-07,1.0
+chr1	4624755	.	AGGCAGAGGCAGAGGCAGAGGCAG	.	.	.	END=4624778;RU=aggcag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99884:4,4:4-4,4-4:13,12,0,2:4,13:3,2:181.288:366.612,131.36:0.0,0.0:3.828e-42,0.000638048,0.999363	0/0:54:1.0:4,4:4-4,4-4:31,18,0,5:4,31:3,5:319.943:326.675,113.385:0.0,0.0:0.0,2.05728e-09,1.0
+chr1	4625336	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4625385;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.30768:29,30:10-30,10-31:3,9,0,3:29,3:13,1|23,1|30,1:126.424:366.612,131.36:8.90044,9.91346:4.7859e-17,0.126138,0.873959	0/0:25:0.745876:25,25:24-25,24-25:6,10,0,8:25,6:11,1|15,1|16,1|17,1|20,1|23,2|24,1:182.304:326.675,113.385:0.21692,0.21692:3.33279e-08,0.0666003,0.933493
+chr1	4626527	.	TTTGTTTGTTTG	.	.	.	END=4626538;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999129:3,3:3-3,3-3:13,14,0,2:3,13:2,2:191.306:366.612,131.36:0.0,0.0:1.39e-43,0.000304124,0.999697	0/0:30:0.999991:3,3:3-3,3-3:18,10,0,2:3,18:2,2:179.203:326.675,113.385:0.0,0.0:0.0,1.23552e-05,0.999987
+chr1	4626573	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=4626592;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:21,11,0,2:4,21:3,2:196.993:366.612,131.36:0.0,0.0:0.0,1.43994e-06,1.0	0/0:26:0.999967:4,4:4-4,4-4:18,8,0,0:4,18:NULL:147.753:326.675,113.385:0.0,0.0:0.0,4.01851e-05,0.999963
+chr1	4626799	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4626850;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:43:0.702903:25,26:25-26,23-26:5,23,0,15:25,3|26,2:5,1|6,1|7,1|8,1|9,1|13,1|15,2|17,1|18,2|21,1|22,2|25,1:367.648:366.612,131.36:0.569802,0.727436:0.0451303,0.841871,0.113169	1/0:45:0.678:24,26:23-28,26-28:12,14,0,17:23,3|24,2|25,2|26,5:6,1|7,1|10,1|11,1|12,2|14,1|15,2|16,3|17,1|18,1|22,1|24,2:328.255:326.675,113.385:1.38175,0.586754:0.000234479,0.977781,0.0220282
+chr1	4629230	.	AGAGAGAGAGAGAG	.	.	.	END=4629243;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:7,7:7-7,7-7:29,34,0,4:7,29:4,1|5,1|6,2:454.035:366.612,131.36:0.0,0.0:0.0,5.7408e-09,1.0	0/0:66:1.0:7,7:7-7,7-7:40,24,0,2:7,40:4,1|5,1:392.862:326.675,113.385:0.0,0.0:0.0,9.17971e-12,1.0
+chr1	4629974	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4630023;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.870331:23,23:23-25,23-25:10,16,0,3:22,2|23,8:14,1|16,1|19,1:227.158:366.612,131.36:0.767183,0.767183:0.995297,0.00471319,2.52889e-12	2/0:43:0.776363:24,25:12-25,12-25:9,23,0,10:24,4|25,5:5,1|8,1|9,1|11,1|15,1|16,2|17,1|18,1|21,1:325.245:326.675,113.385:5.93518,6.46133:0.000205716,0.786996,0.212843
+chr1	4631170	.	AAGGACAAAGGACAAAGGACA	.	.	.	END=4631190;RU=aaggaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,14,0,2:3,20:2,2:221.92:366.612,131.36:0.0,0.0:0.0,4.45143e-06,0.999995	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.712:326.675,113.385:0.0,0.0:0.0,5.48697e-06,0.999995
+chr1	4637541	.	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	.	.	END=4637620;RU=aagag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:57:0.997026:15,16:15-16,15-16:5,29,0,23:15,2|16,3:2,1|3,3|4,1|5,2|6,2|7,3|8,3|9,1|13,1|14,3|15,3:458.031:366.612,131.36:0.298675,0.21692:5.33947e-07,0.997066,0.00294373	1/1:37:0.666402:15,15:7-15,7-15:4,13,0,19:15,4:4,4|6,3|7,2|8,2|10,1|12,3|13,2|14,2:271.649:326.675,113.385:3.85559,3.85559:0.86852,0.131573,2.53072e-08
+chr1	4637824	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4637855;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.995618:20,20:20-20,20-20:13,8,0,11:20,13:5,1|6,2|7,1|8,1|10,1|14,2|16,1|18,1|19,1:218.423:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:33:0.641168:16,16:15-17,15-17:13,13,0,6:15,4|16,9:6,1|9,1|10,2|15,2:236.615:326.675,113.385:0.609213,0.609213:1.13819e-09,0.357257,0.64279
+chr1	4639717	.	ATTTATTTATTTATTT	.	.	.	END=4639732;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:29,12,0,6:4,29:3,6:267.88:366.612,131.36:0.0,0.0:0.0,5.25643e-09,1.0	0/0:34:1.0:4,4:4-4,4-4:25,7,0,2:4,25:3,2:184.06:326.675,113.385:0.0,0.0:0.0,1.53537e-07,1.0
+chr1	4642589	.	CTTTCTTTCTTT	.	.	.	END=4642600;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:24,17,0,2:3,24:2,2:268.451:366.612,131.36:0.0,0.0:0.0,1.27997e-07,1.0	0/0:43:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:275.826:326.675,113.385:0.0,0.0:0.0,8.98022e-07,1.0
+chr1	4643335	.	AAGGAAGGAAGG	.	.	.	END=4643346;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,8,0,4:3,30:2,4:221.947:366.612,131.36:0.0,0.0:0.0,1.92521e-09,1.0	0/0:49:1.0:3,3:3-3,3-3:29,17,0,3:3,29:2,3:290.615:326.675,113.385:0.0,0.0:0.0,9.02746e-09,1.0
+chr1	4648909	.	TTGTTTTGTTTTGTT	.	.	.	END=4648923;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.459673:3,3:1-3,1-3:3,19,0,0:3,3:NULL:180.672:366.612,131.36:0.508722,0.508722:2.71995e-10,0.425296,0.574792	0/0:23:0.912248:3,3:3-3,3-3:7,16,0,0:3,7:NULL:178.273:326.675,113.385:0.0,0.0:9.71457e-23,0.070973,0.929121
+chr1	4653049	.	TTTCTTTCTTTC	.	.	.	END=4653060;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:166.14:366.612,131.36:0.0,0.0:0.0,1.51626e-06,1.0	0/0:21:0.999371:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.355:326.675,113.385:0.0,0.0:0.0,0.000334464,0.999667
+chr1	4653751	.	AAAACAAAAACAAAAACA	.	.	.	END=4653768;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999993:3,3:1-3,1-3:21,21,0,0:3,21:NULL:274.047:366.612,131.36:0.863148,0.863148:0.0,1.14986e-05,0.999988	0/0:36:0.999992:3,3:3-3,3-3:18,16,0,2:3,18:2,2:230.727:326.675,113.385:0.0,0.0:0.0,1.67796e-05,0.999986
+chr1	4654599	.	GTTGGTTGGTTG	GTTGGTTGGTTGGTTG	.	.	END=4654610;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999927:4,4:3-4,3-4:17,16,0,0:4,17:NULL:216.93:366.612,131.36:0.270063,0.270063:0.0,3.87117e-05,0.999963	0/0:25:0.999943:3,3:3-3,3-3:17,8,0,0:3,17:NULL:139.825:326.675,113.385:0.0,0.0:0.0,3.49385e-05,0.999964
+chr1	4655498	.	TGTGTGTGTGTG	TGTGTGTGTG	.	.	END=4655509;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999717:5,5:4-5,4-5:16,25,0,0:5,16:NULL:286.158:366.612,131.36:0.334882,0.334882:0.999949,5.08902e-05,1.01e-43	0/0:35:0.999992:6,6:6-6,6-6:19,16,0,0:6,19:NULL:220.995:326.675,113.385:0.0,0.0:2.6249e-41,1.50959e-05,0.999986
+chr1	4661585	.	ACAACAACAACA	.	.	.	END=4661596;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:219.982:366.612,131.36:0.0,0.0:0.0,3.05948e-06,1.0	0/0:28:0.999994:4,4:4-4,4-4:19,9,0,0:4,19:NULL:163.593:326.675,113.385:0.0,0.0:0.0,1.5113e-05,0.999986
+chr1	4661836	.	GTGGGTGGGTGG	.	.	.	END=4661847;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999839:3,3:3-3,3-3:16,13,0,0:3,16:NULL:182.229:366.612,131.36:0.0,0.0:0.0,9.61132e-05,0.999904	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:189.198:326.675,113.385:0.0,0.0:0.0,3.92993e-07,1.0
+chr1	4663912	.	AATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATA	.	.	END=4663943;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.997908:6,6:6-6,6-6:13,13,0,0:6,13:NULL:175.356:366.612,131.36:0.0,0.0:0.999734,0.000269517,6.86485e-36	0/0:21:0.992977:8,8:8-8,8-8:10,6,0,5:8,10:3,1|4,1|5,1|6,1|7,1:132.276:326.675,113.385:0.0,0.0:1.45405e-32,0.0035816,0.996428
+chr1	4664837	.	GTTTGTTTGTTTGTTT	.	.	.	END=4664852;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:21,15,0,2:4,21:2,1|3,1:230.746:366.612,131.36:0.0,0.0:0.0,1.93539e-06,1.0	0/0:30:0.999068:4,4:2-4,2-4:14,15,0,0:4,14:NULL:192.754:326.675,113.385:0.997595,0.997595:4.60983e-38,0.000776317,0.999226
+chr1	4666307	.	AAACAAACAAACAAACAAAC	.	.	.	END=4666326;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999992:5,5:5-5,5-5:18,21,0,5:5,18:3,1|4,4:300.251:366.612,131.36:0.0,0.0:0.0,1.29769e-05,0.999987	0/0:39:1.00001:5,5:5-5,5-5:22,12,0,5:5,22:2,2|3,1|4,2:233.656:326.675,113.385:0.0,0.0:0.0,8.89071e-07,1.0
+chr1	4666832	.	TAAATAAATAAA	.	.	.	END=4666843;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:20,16,0,3:3,20:2,3:241.532:366.612,131.36:0.0,0.0:0.0,2.62971e-06,1.0	0/0:25:0.998541:3,3:3-3,3-3:12,10,0,3:3,12:2,3:161.795:326.675,113.385:0.0,0.0:5.2568e-41,0.00054033,0.999462
+chr1	4675038	.	AAAACAAAACAAAAC	.	.	.	END=4675052;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:3,3:3-3,3-3:38,26,0,0:3,38:NULL:382.892:366.612,131.36:0.0,0.0:0.0,3.33165e-11,1.0	0/0:50:1.0:3,3:3-3,3-3:34,14,0,2:3,34:2,2:279.961:326.675,113.385:0.0,0.0:0.0,2.22486e-10,1.0
+chr1	4675154	.	ATAAATAAATAA	.	.	.	END=4675165;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:19,26,0,2:3,19:2,2:322.023:366.612,131.36:0.0,0.0:0.0,8.43525e-06,0.999994	0/0:48:1.0:3,3:3-3,3-3:31,17,0,0:3,31:NULL:279.737:326.675,113.385:0.0,0.0:0.0,2.42215e-09,1.0
+chr1	4678790	.	AGTGAGTGAGTG	.	.	.	END=4678801;RU=agtg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.99837:3,3:3-3,3-3:13,8,0,0:3,13:NULL:127.939:366.612,131.36:0.0,0.0:8.83e-43,0.000853769,0.99915	0/0:30:0.999849:3,3:3-3,3-3:16,14,0,0:3,16:NULL:198.303:326.675,113.385:0.0,0.0:0.0,0.00010299,0.999896
+chr1	4678965	.	ACAGACAGACAG	.	.	.	END=4678976;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.558221:3,3:2-3,2-3:4,11,0,0:3,4:NULL:114.069:366.612,131.36:0.169767,0.169767:6.68288e-13,0.253675,0.746332	0/0:22:0.998838:3,3:3-3,3-3:13,9,0,0:3,13:NULL:138.47:326.675,113.385:0.0,0.0:1.0019e-41,0.000656811,0.999347
+chr1	4682367	.	TGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGT	.	.	END=4682390;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:1.0:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.642:366.612,131.36:0.0,0.0:1.0,1.95473e-06,0.0	0/0:25:0.999871:8,8:8-8,8-8:16,4,0,5:8,16:3,1|6,2|7,2:137.885:326.675,113.385:0.0,0.0:4.181e-42,4.04716e-05,0.999963
+chr1	4686168	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4686209;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.187797:22,22:22-24,22-24:2,10,0,11:22,2:5,1|6,1|8,1|10,1|11,1|12,2|14,1|15,2|17,1:189.185:366.612,131.36:0.74264,0.74264:0.00012952,0.20116,0.798757	0/0:32:0.914242:21,21:20-22,20-22:8,7,0,15:21,8:5,2|6,1|7,1|9,3|10,2|13,1|14,1|15,1|16,1|17,2:218.165:326.675,113.385:0.43744,0.43744:1.32364e-09,0.0367255,0.963338
+chr1	4686524	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=4686563;RU=attt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.151438:7,7:7-10,7-10:0,28,0,0:NULL:NULL:276.397:366.612,131.36:1.35046,1.35046:0.470992,0.446304,0.0828489	0/0:29:0.947364:10,10:10-10,10-10:7,12,0,10:10,7:4,1|5,5|7,1|8,1|9,2:216.363:326.675,113.385:0.0,0.0:6.04772e-18,0.0269432,0.973108
+chr1	4686877	.	CTCTTGCCTCTTGCCTCTTGC	CTCTTGCCTCTTGC	.	.	END=4686897;RU=ctcttgc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:1.00001:2,2:2-2,2-2:20,2,0,0:2,20:NULL:101.017:366.612,131.36:0.0,0.0:0.999994,6.05004e-06,0.0	0/0:29:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:171.243:326.675,113.385:0.0,0.0:0.0,1.90551e-05,0.999985
+chr1	4686995	.	CAACCAACCAAC	.	.	.	END=4687006;RU=caac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999964:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.776:366.612,131.36:0.0,0.0:0.0,2.7351e-05,0.999972	0/0:31:1.00001:3,3:3-3,3-3:22,7,0,2:3,22:2,2:165.401:326.675,113.385:0.0,0.0:0.0,6.19326e-07,1.0
+chr1	4687079	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=4687118;RU=tttg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.97354:9,9:9-9,9-9:9,9,0,2:9,9:4,1|6,1:135.748:366.612,131.36:0.0,0.0:0.992191,0.00782769,1.51507e-15	0/0:31:0.999473:10,10:10-10,10-10:14,9,0,8:10,14:3,2|4,1|5,2|6,1|8,1|9,1:196.508:326.675,113.385:0.0,0.0:4.71767e-36,0.000248488,0.999751
+chr1	4689281	.	CCGCCGCCGCCG	.	.	.	END=4689292;RU=ccg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:244.472:366.612,131.36:0.0,0.0:0.0,7.97427e-09,1.0	0/0:55:1.0:4,4:4-4,4-4:36,19,0,0:4,36:NULL:318.93:326.675,113.385:0.0,0.0:0.0,2.99631e-10,1.0
+chr1	4689823	.	AAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=4689834;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.570554:4,4:1-4,1-4:4,18,0,0:4,4:NULL:181.263:366.612,131.36:0.896026,0.896026:5.26906e-18,0.295691,0.704315	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:157.83:326.675,113.385:0.0,0.0:0.0,3.10126e-06,1.0
+chr1	4697276	.	CACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=4697299;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.99099:16,16:13-16,13-16:12,15,0,0:16,12:NULL:194.439:366.612,131.36:1.26733,1.26733:0.0,0.00227994,0.997724	0/0:29:0.982059:12,12:11-13,11-13:14,6,0,8:11,2|12,12:4,1|6,1|8,2|9,1|10,2|11,1:184.4:326.675,113.385:0.280742,0.280742:1.87038e-14,0.0171058,0.98293
+chr1	4697462	.	ATTATTATTATT	.	.	.	END=4697473;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:22,30,0,3:4,22:3,3:390.194:366.612,131.36:0.0,0.0:0.0,1.00364e-06,1.0	0/0:53:1.0:4,4:4-4,4-4:31,20,0,2:4,31:3,2:325.467:326.675,113.385:0.0,0.0:0.0,2.24018e-09,1.0
+chr1	4698068	.	GGAGGAGGAGGA	GGAGGAGGAGGAGGAGGA	.	.	END=4698079;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.00001:6,6:6-6,6-6:23,16,0,4:6,23:4,3|5,1:261.501:366.612,131.36:0.0990099,0.0990099:0.0,5.27864e-08,1.0	0/0:26:0.999945:4,4:4-4,4-4:17,6,0,3:4,17:3,3:141.186:326.675,113.385:0.0,0.0:0.0,2.1746e-05,0.999979
+chr1	4699171	.	TTTTGTTTTGTTTTG	.	.	.	END=4699185;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:40,16,0,0:3,40:NULL:305.478:366.612,131.36:0.0,0.0:0.0,5.41064e-12,1.0	0/0:37:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:196.267:326.675,113.385:0.0,0.0:0.0,4.22444e-08,1.0
+chr1	4700769	.	CCTCCTCCTCCT	.	.	.	END=4700780;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,14,0,2:4,21:3,2:226.516:366.612,131.36:0.0,0.0:0.0,2.88555e-06,1.0	0/0:22:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:101.437:326.675,113.385:0.0,0.0:0.0,1.29604e-05,0.999987
+chr1	4700784	.	CCACCACCACCA	.	.	.	END=4700795;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999947:4,4:4-4,4-4:17,13,0,3:4,17:3,3:209.523:366.612,131.36:0.0,0.0:0.0,2.62881e-05,0.999978	0/0:22:0.999771:4,4:4-4,4-4:15,4,0,3:4,15:3,3:116.705:326.675,113.385:0.0,0.0:7e-45,8.66633e-05,0.999917
+chr1	4702033	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4702088;RU=ac;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.949836:18,18:18-27,18-27:10,7,0,0:18,10:NULL:111.362:366.612,131.36:4.28531,4.28531:0.996482,0.00352666,0.0	2/0:38:0.603072:27,28:26-28,26-28:4,17,0,16:27,2|28,2:6,2|10,1|12,1|13,1|14,1|18,1|20,2|21,4|26,2|27,1:299.119:326.675,113.385:0.60323,0.547158:0.0242104,0.693448,0.282391
+chr1	4704115	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4704162;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	2/0:32:0.730822:23,24:23-24,24-24:8,14,0,10:23,3|24,5:5,2|11,2|15,3|17,1|18,1|23,1:250.512:326.675,113.385:0.498011,0.0990099:0.00034609,0.740631,0.259029
+chr1	4704841	.	TCTTTCTTTCTT	.	.	.	END=4704852;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:239.977:366.612,131.36:0.0,0.0:0.0,1.205e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:259.944:326.675,113.385:0.0,0.0:0.0,1.46928e-07,1.0
+chr1	4706710	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=4706733;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999301:6,6:6-6,6-6:14,12,0,9:6,14:3,4|4,4|5,1:233.335:366.612,131.36:0.0,0.0:1.17776e-34,0.000402795,0.999599	0/0:17:0.981548:6,6:6-6,6-6:9,4,0,4:6,9:3,2|4,1|5,1:103.685:326.675,113.385:0.0,0.0:8.31345e-23,0.00768594,0.992333
+chr1	4713034	.	ATATATATATAT	.	.	.	END=4713045;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.998997:6,6:6-7,6-7:14,12,0,0:6,14:NULL:161.232:366.612,131.36:0.345543,0.345543:1.41345e-23,0.000456233,0.999545	0/0:22:0.999591:6,6:6-6,6-6:15,7,0,0:6,15:NULL:125.478:326.675,113.385:0.0,0.0:4.14375e-25,0.000265164,0.999736
+chr1	4715718	.	TTGTTGTTGTTG	.	.	.	END=4715729;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999965:4,4:4-4,4-4:19,16,0,0:4,19:NULL:221.081:366.612,131.36:0.0,0.0:0.0,3.13059e-05,0.999971	0/0:30:1.0:4,4:4-4,4-4:19,9,0,2:4,19:3,2:175.124:326.675,113.385:0.0,0.0:0.0,8.15183e-06,0.999994
+chr1	4717842	.	TCTTTCTTTCTTTCTT	.	.	.	END=4717857;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:25,24,0,2:4,25:3,2:339.318:366.612,131.36:0.0,0.0:0.0,3.68868e-07,1.0	0/0:41:0.999986:4,4:4-4,4-4:20,21,0,0:4,20:NULL:270.973:326.675,113.385:0.0,0.0:0.0,2.59705e-05,0.999978
+chr1	4718882	.	AACTAACTAACT	.	.	.	END=4718893;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,20,0,2:3,24:2,2:285.668:366.612,131.36:0.0,0.0:0.0,4.09028e-07,1.0	0/0:26:0.999882:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.664:326.675,113.385:0.0,0.0:0.0,6.8464e-05,0.999933
+chr1	4719899	.	CACACACACACACACACA	CACACACACACACACACACA	.	.	END=4719916;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:0.997642:10,10:10-15,10-15:34,18,0,3:10,34:9,2|15,1:344.303:366.612,131.36:2.24763,2.24763:0.0,1.18615e-10,1.0	0/0:31:1.0:9,9:9-9,9-9:24,6,0,0:9,24:NULL:154.629:326.675,113.385:0.0990099,0.0990099:9.45833e-37,6.36154e-07,1.0
+chr1	4722124	.	AAACAAACAAACAAAC	AAACAAAC,AAACAAACAAAC	.	.	END=4722139;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.184894:2,3:1-4,2-4:0,27,0,2:NULL:3,2:288.601:366.612,131.36:0.914864,0.61098:0.38494,0.537507,0.0776752	0/0:30:0.999591:4,4:4-4,4-4:14,10,0,6:4,14:2,3|3,3:188.17:326.675,113.385:0.0,0.0:4.64806e-36,0.000157759,0.999843
+chr1	4725802	.	ACATACATACAT	.	.	.	END=4725813;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-9,3-9:32,16,0,0:3,32:NULL:276.69:366.612,131.36:2.76732,2.76732:0.0,2.35909e-09,1.0	0/0:35:1.0:3,3:3-3,3-3:27,8,0,0:3,27:NULL:182.575:326.675,113.385:0.0,0.0:0.0,4.38532e-08,1.0
+chr1	4726010	.	TTGCTTTGCTTTGCTTTGCTTTGCT	TTGCT	.	.	END=4726034;RU=ttgct;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0189889:1,1:1-5,1-5:0,9,0,0:NULL:NULL:79.2751:366.612,131.36:1.56624,1.56624:0.226535,0.525124,0.248383	0/0:34:1.00001:5,5:4-5,4-5:22,9,0,2:5,22:2,1|3,1:187.145:326.675,113.385:0.236383,0.236383:0.0,2.3239e-06,1.0
+chr1	4727699	.	ATAAATAAATAA	.	.	.	END=4727710;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:3:0.444226:3,3:3-3,3-3:3,0,0,0:3,3:NULL:11.7222:366.612,131.36:0.0,0.0:2.47845e-10,0.222364,0.777675	0/0:27:0.998966:3,3:3-3,3-3:13,14,0,0:3,13:NULL:177.13:326.675,113.385:0.0,0.0:4.2333e-41,0.000612016,0.999392
+chr1	4730651	.	CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	CTC	.	.	END=4730686;RU=ctc;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0285318:1,1:1-3,1-3:0,12,0,0:NULL:NULL:107.704:366.612,131.36:0.629628,0.629628:0.688685,0.293806,0.0175481	0/0:21:0.9577:12,12:11-12,11-12:8,9,0,3:12,8:8,2|11,1:137.236:326.675,113.385:0.382696,0.382696:2.19064e-17,0.0232822,0.976764
+chr1	4732027	.	CTCTCTCTCTCTCT	CTCTCTCTCTCT	.	.	END=4732040;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.0:6,6:6-6,6-6:40,9,0,0:6,40:NULL:244.43:366.612,131.36:0.0,0.0:1.0,6.78159e-12,0.0	0/0:39:0.999355:7,7:7-8,7-8:23,12,0,4:7,21|8,2:4,1|5,1|6,2:242.981:326.675,113.385:0.169767,0.169767:1.39357e-38,6.40975e-07,1.0
+chr1	4736939	.	AAATAAATAAATAAAT	.	.	.	END=4736954;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999453:4,4:4-4,4-4:15,16,0,0:4,15:NULL:209.92:366.612,131.36:0.0,0.0:4.8e-44,0.000465687,0.999537	0/0:14:0.826804:4,4:4-4,4-4:6,8,0,0:4,6:NULL:94.3292:326.675,113.385:0.0,0.0:3.84179e-18,0.110392,0.889705
+chr1	4744698	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTT	.	.	END=4744727;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999849:3,3:3-3,3-3:16,15,0,3:3,16:2,3:226.572:366.612,131.36:0.0,0.0:0.99998,1.92607e-05,0.0	0/0:29:0.999864:6,6:6-6,6-6:16,9,0,4:6,16:2,1|3,2|5,1:173.344:326.675,113.385:0.0,0.0:0.0,8.61569e-05,0.999917
+chr1	4746881	.	TAGATAGATAGA	.	.	.	END=4746892;RU=taga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,1|3,1:188.564:366.612,131.36:0.0,0.0:0.0,2.9315e-06,1.0	0/0:20:0.99898:3,3:3-3,3-3:13,7,0,0:3,13:NULL:113.283:326.675,113.385:0.0,0.0:1.927e-42,0.000512317,0.999491
+chr1	4749824	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=4749859;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.491197:12,14:12-19,12-19:6,15,0,0:12,2|13,2|14,2:NULL:170.202:366.612,131.36:2.80724,2.22986:0.998504,0.00150085,2.85157e-16	0/0:7:0.355433:18,18:17-18,17-18:3,3,0,0:18,3:NULL:40.6567:326.675,113.385:0.607117,0.607117:0.00025367,0.373956,0.625845
+chr1	4755604	.	GGAGGGAGGGAGGGAG	.	.	.	END=4755619;RU=ggag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.303264:4,4:4-4,4-4:2,5,0,0:4,2:NULL:51.7998:366.612,131.36:0.0,0.0:1.04381e-05,0.377089,0.622955	0/0:15:0.994918:4,4:4-4,4-4:11,2,0,2:4,11:2,2:74.6159:326.675,113.385:0.0,0.0:3.27251e-26,0.00232733,0.997678
+chr1	4755631	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	.	END=4755720;RU=gagag;PERIOD=5;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.0345281:18,18:1-18,1-18:0,4,0,4:NULL:7,1|13,1|15,2:63.3554:366.612,131.36:4.54331,4.54331:0.631007,0.33457,0.0345084	0/0:21:0.204562:18,18:6-18,6-18:2,6,0,12:18,2:3,1|4,3|5,1|6,1|8,2|12,2|13,1|16,1:149.302:326.675,113.385:5.75506,5.75506:0.000265565,0.60808,0.39172
+chr1	4757329	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=4757372;RU=ct;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.0928393:18,18:18-21,18-21:0,24,0,0:NULL:NULL:219.478:366.612,131.36:1.4276,1.4276:0.50981,0.412801,0.0774748	0/0:17:0.290199:22,22:18-22,18-22:6,7,0,3:21,2|22,4:5,1|6,1|12,1:120.818:326.675,113.385:1.77374,1.77374:0.00012047,0.657285,0.34262
+chr1	4758257	.	AATAAATAAATA	AATA	.	.	END=4758268;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.247138:1,1:1-3,1-3:0,22,0,0:NULL:NULL:224.468:366.612,131.36:0.911644,0.911644:0.474337,0.438266,0.0875358	0/0:19:0.992514:3,3:3-3,3-3:10,7,0,2:3,10:2,2:120.596:326.675,113.385:0.0,0.0:2.10875e-29,0.00267692,0.99733
+chr1	4761246	.	TTTGTTTGTTTG	TTTGTTTG	.	.	END=4761257;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.999753:2,2:2-2,2-2:15,9,0,0:2,15:NULL:139.97:366.612,131.36:0.0,0.0:0.999841,0.000161256,4.8e-44	0/0:26:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:129.24:326.675,113.385:0.0,0.0:0.0,2.46117e-06,1.0
+chr1	4765570	.	AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA	AAAGA,AAAGAAAAGAAAAGAAAAGAAAAGA	.	.	END=4765609;RU=aaaga;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0327166:1,1:1-5,1-5:0,9,0,0:NULL:NULL:86.9262:366.612,131.36:1.26307,1.26307:0.53443,0.419224,0.0465006	2/2:1:0.020438:5,5:8-8,8-8:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
+chr1	4767274	.	TTTTGTTTTGTTTTG	TTTTGTTTTG	.	.	END=4767288;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.00001:2,2:2-2,2-2:22,11,0,0:2,22:NULL:183.799:366.612,131.36:0.0,0.0:1.0,1.05278e-06,0.0	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.989:326.675,113.385:0.0,0.0:0.0,1.98159e-06,1.0
+chr1	4769727	.	TTTTTTTGTTTTTTTGTTTTTTTG	TTTTTTTG	.	.	END=4769750;RU=tttttttg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.164897:1,1:1-2,1-2:0,27,0,0:NULL:NULL:231.409:366.612,131.36:0.412766,0.412766:0.544221,0.398179,0.057756	0/0:8:0.653109:3,3:1-3,1-3:4,3,0,0:3,4:NULL:42.5872:326.675,113.385:0.968882,0.968882:1.43076e-12,0.160707,0.839368
+chr1	4772542	.	AATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4772569;RU=aata;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.275424:7,7:7-8,7-8:2,2,0,2:7,2:3,1|5,1:43.124:366.612,131.36:0.371782,0.371782:6.84117e-06,0.345865,0.654163	0/0:23:0.955763:7,7:7-7,7-7:7,9,0,7:7,7:3,1|5,2|6,4:162.133:326.675,113.385:0.0,0.0:5.84855e-18,0.0186585,0.981379
+chr1	4777183	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=4777216;RU=tc;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.998464:8,8:8-8,8-8:13,12,0,3:8,13:7,3:186.353:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:31:0.754583:17,17:16-17,16-17:5,14,0,11:17,5:4,1|5,2|6,1|9,1|10,1|11,1|12,1|14,1|16,2:236.182:326.675,113.385:0.442564,0.442564:3.68037e-08,0.107497,0.892602
+chr1	4778087	.	TGTGTGTGTGTG	TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG	.	.	END=4778098;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.982749:7,9:7-9,7-9:4,23,0,2:7,2|9,2:6,2:239.527:366.612,131.36:0.5634,0.665211:4.26849e-27,6.03865e-05,0.999941	0/0:31:0.996471:6,6:6-7,6-7:12,18,0,0:6,12:NULL:212.097:326.675,113.385:0.169767,0.169767:7.9323e-14,0.00208419,0.997921
+chr1	4779799	.	TGTGTGTGTGTGTG	.	.	.	END=4779812;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999841:7,7:7-7,7-7:16,14,0,0:7,16:NULL:192.429:366.612,131.36:0.0,0.0:2.56299e-31,8.08966e-05,0.999919	0/0:18:0.999693:7,7:7-7,7-7:15,1,0,2:7,15:5,1|6,1:84.5827:326.675,113.385:0.0,0.0:1.64184e-29,0.0001191,0.999881
+chr1	4780052	.	GTTTGTTTGTTT	.	.	.	END=4780063;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999904:3,3:3-3,3-3:17,19,0,0:3,17:NULL:238.62:366.612,131.36:0.0,0.0:0.0,7.31266e-05,0.999926	0/0:29:1.00001:3,3:3-3,3-3:20,7,0,2:3,20:2,2:156.501:326.675,113.385:0.0,0.0:0.0,2.69589e-06,1.0
+chr1	4781290	.	AAAACAAAACAAAACAAAAC	AAAAC	.	.	END=4781309;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.077236:1,1:1-3,1-3:0,9,0,0:NULL:NULL:83.6948:366.612,131.36:0.885129,0.885129:0.393228,0.473883,0.132974	0/0:22:0.998513:4,4:4-4,4-4:13,6,0,3:4,13:3,3:130.081:326.675,113.385:0.0,0.0:3.564e-42,0.000659424,0.999346
+chr1	4783247	.	ATATATATATATAT	ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATAT	.	.	END=4783260;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:15:0.914663:15,16:15-16,15-16:5,10,0,0:15,3|16,2:NULL:117.259:366.612,131.36:0.38423,0.661813:0.0,0.0,1.0	0/0:16:0.97951:7,7:6-7,6-7:10,5,0,0:7,10:NULL:92.6401:326.675,113.385:0.253975,0.253975:2.75527e-13,0.0112003,0.988822
+chr1	4783908	.	AAAAAACAAAAAACAAAAAAC	AAAAAAC	.	.	END=4783928;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.121674:1,1:1-2,1-2:0,13,0,0:NULL:NULL:122.189:366.612,131.36:0.38244,0.38244:0.327036,0.514355,0.158633	0/0:20:0.999388:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.87:326.675,113.385:0.0,0.0:0.0,0.00041394,0.99959
+chr1	4789575	.	TGAATGAATGAA	.	.	.	END=4789586;RU=tgaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.544:366.612,131.36:0.0,0.0:0.0,7.52438e-07,1.0	0/0:22:0.999979:3,3:3-3,3-3:18,4,0,0:3,18:NULL:103.76:326.675,113.385:0.0,0.0:0.0,1.71272e-05,0.999986
+chr1	4790408	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG,AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=4790503;RU=aag;PERIOD=3;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0413989:14,14:14-16,14-16:0,14,0,3:NULL:5,1|12,1|14,1:150.9:366.612,131.36:0.752866,0.752866:1.0,0.0,0.0	2/2:28:0.0217444:31,31:6-32,6-32:0,12,0,13:NULL:6,1|7,2|9,1|12,1|15,1|22,1|28,4|29,1|31,1:211.088:326.675,113.385:11.7012,11.7012:0.153782,0.603073,0.243224
+chr1	4790591	.	AATAATAATAATAATAAT	AATAATAATAATAAT	.	.	END=4790608;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:1.00001:5,5:5-5,5-5:22,10,0,0:5,22:NULL:183.042:366.612,131.36:0.0,0.0:1.0,1.20863e-06,1e-44	0/0:19:0.999865:6,6:6-6,6-6:16,1,0,2:6,16:4,1|5,1:86.8798:326.675,113.385:0.0,0.0:9.7689e-37,5.64849e-05,0.999947
+chr1	4794293	.	AGACAGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGAC	.	.	END=4794312;RU=agac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:7,7:7-7,7-7:20,16,0,5:7,20:2,1|3,2|6,2:262.128:366.612,131.36:0.0,0.0:0.0,8.52709e-07,1.0	0/0:46:0.999962:5,5:4-5,4-5:17,18,0,10:5,17:2,2|3,2|4,6:306.135:326.675,113.385:0.236383,0.236383:0.0,1.79042e-05,0.999986
+chr1	4795085	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	END=4795132;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.983372:11,11:10-11,10-11:10,7,0,5:11,10:2,1|4,1|6,2|8,1:148.19:366.612,131.36:0.374147,0.374147:0.993804,0.00621315,1.9132e-19	0/0:18:0.808038:12,12:11-12,11-12:6,5,0,6:12,6:4,2|6,1|7,2|9,1:115.137:326.675,113.385:0.486863,0.486863:1.85358e-15,0.117728,0.882373
+chr1	4795238	.	GTTTTGTTTTGTTTTGTTTT	GTTTTGTTTT	.	.	END=4795257;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0361998:2,2:1-2,1-2:0,10,0,0:NULL:NULL:91.2136:366.612,131.36:0.497026,0.497026:0.251267,0.543828,0.204912	0/0:17:0.999259:4,4:4-4,4-4:14,3,0,0:4,14:NULL:82.904:326.675,113.385:0.0,0.0:0.0,0.000434742,0.999568
+chr1	4796020	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=4796043;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:2,2:223.615:366.612,131.36:0.0,0.0:1.0,1.53343e-06,0.0	0/0:47:0.999782:6,6:5-6,5-6:15,24,0,7:6,15:2,1|3,1|4,2|5,3:330.305:326.675,113.385:0.21692,0.21692:3.8787e-40,0.000165203,0.999835
+chr1	4802916	.	TCTCTCTCTCTCTC	TCTCTCTCTC,TCTCTCTCTCTCTCTC	.	.	END=4802929;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.942033:5,8:5-8,7-8:8,14,0,0:5,2|7,2|8,4:NULL:166.965:366.612,131.36:0.907009,0.442564:2.56506e-07,0.96656,0.0335034	0/0:32:0.999643:7,7:6-7,6-7:16,14,0,0:7,16:NULL:187.072:326.675,113.385:0.258566,0.258566:1.91725e-19,0.000245916,0.999757
+chr1	4804071	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=4804095;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.0894039:5,5:2-5,2-5:0,11,0,4:NULL:4,4:127.203:366.612,131.36:0.778346,0.778346:0.129595,0.474151,0.396449	0/0:28:0.999989:5,5:5-5,5-5:18,8,0,2:5,18:3,1|4,1:156.963:326.675,113.385:0.0,0.0:0.0,1.81889e-05,0.999985
+chr1	4804879	.	AAAAACAAAAACAAAAAC	.	.	.	END=4804896;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999446:3,3:3-3,3-3:14,20,0,0:3,14:NULL:236.542:366.612,131.36:0.0,0.0:0.0,0.000471379,0.99953	0/0:28:0.999832:3,3:3-3,3-3:16,12,0,0:3,16:NULL:173.907:326.675,113.385:0.0,0.0:0.0,0.00012135,0.99988
+chr1	4805189	.	ATTTATTTATTT	ATTTATTTATTTATTT	.	.	END=4805200;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.999411:3,4:3-4,4-4:18,5,0,2:3,6|4,12:2,2:141.207:366.612,131.36:0.323567,0.0:0.0,7.80262e-09,1.0	0/0:24:0.999635:3,3:3-3,3-3:15,9,0,0:3,15:NULL:140.572:326.675,113.385:0.0,0.0:0.0,0.000191892,0.999811
+chr1	4806133	.	TGTGTGTGTGTGTG	.	.	.	END=4806146;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995514:7,7:7-7,7-7:11,16,0,3:7,11:5,2|6,1:212.496:366.612,131.36:0.0,0.0:9.26685e-23,0.00238463,0.997624	0/0:34:0.999992:7,7:7-7,7-7:19,15,0,0:7,19:NULL:214.097:326.675,113.385:0.0,0.0:6.24431e-39,1.63575e-05,0.999986
+chr1	4806257	.	CTGACTGACTGA	.	.	.	END=4806268;RU=ctga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:159.946:366.612,131.36:0.0,0.0:0.0,2.69918e-07,1.0	0/0:25:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.994:326.675,113.385:0.0,0.0:0.0,2.00295e-05,0.99998
+chr1	4806381	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCT	.	.	END=4806412;RU=ttct;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0223139:1,1:1-2,1-2:0,9,0,0:NULL:NULL:81.0159:366.612,131.36:0.486863,0.486863:0.428852,0.485257,0.0860298	0/0:26:0.445733:8,8:6-8,6-8:3,10,0,13:8,3:2,1|3,1|4,1|5,3|6,7:196.493:326.675,113.385:0.390054,0.390054:0.000803766,0.336268,0.662947
+chr1	4808103	.	GCCTGCCTGCCT	.	.	.	END=4808114;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:189.832:366.612,131.36:0.0,0.0:0.0,6.95971e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:195.369:326.675,113.385:0.0,0.0:0.0,2.4422e-07,1.0
+chr1	4809703	.	ATGAATGAATGAATGA	.	.	.	END=4809718;RU=atga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999994:4,4:4-4,4-4:19,5,0,0:4,19:NULL:118.253:366.612,131.36:0.0,0.0:0.0,1.32162e-05,0.999987	0/0:25:0.99999:4,4:4-4,4-4:18,5,0,2:4,18:2,1|3,1:134.833:326.675,113.385:0.0,0.0:0.0,1.84135e-05,0.999985
+chr1	4809829	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=4809848;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:20,13,0,3:4,20:2,1|3,2:222.309:366.612,131.36:0.0,0.0:0.0,3.33137e-06,1.0	0/0:31:1.0:4,4:4-4,4-4:21,10,0,0:4,21:NULL:174.053:326.675,113.385:0.0,0.0:0.0,5.23654e-06,0.999995
+chr1	4809864	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4809903;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.88101:19,19:18-20,18-20:14,15,0,14:18,3|19,11:4,1|6,2|8,1|9,1|10,2|13,1|14,1|15,1|16,2|17,1|18,1:319.085:366.612,131.36:0.410384,0.410384:0.998451,0.00155301,1.22279e-11	0/2:43:0.997816:20,21:20-20,20-21:17,11,0,14:19,2|20,12|21,3:5,1|7,3|9,1|13,2|14,1|16,1|17,3|19,1|21,1:302.448:326.675,113.385:0.0990099,0.521285:9.21874e-20,2.73005e-07,1.0
+chr1	4810353	.	TTTGTTTGTTTG	.	.	.	END=4810364;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,16,0,2:3,24:2,2:248.206:366.612,131.36:0.0,0.0:0.0,2.23073e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:203.079:326.675,113.385:0.0,0.0:0.0,2.59322e-09,1.0
+chr1	4810746	.	CATGCATGCATG	.	.	.	END=4810757;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:25,25,0,0:3,25:NULL:311.433:366.612,131.36:0.0,0.0:0.0,1.80033e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.068:326.675,113.385:0.0,0.0:0.0,7.25219e-07,1.0
+chr1	4810950	.	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	.	.	END=4811123;RU=ttctcc;PERIOD=6;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.284642:15,19:7-15,7-21:3,3,0,14:15,3:4,1|5,2|6,2|7,3|8,2|9,1|10,1|13,1|19,1:141.767:366.612,131.36:3.80837,5.76309:1.0,0.0,0.0	3/4:51:0.181505:20,28:4-20,24-33:0,13,7,28:NULL:2,1|3,1|4,1|5,3|6,4|7,3|8,1|12,2|13,1|15,3|16,2|17,3|18,1|19,1|20,1:451.787:326.675,113.385:4.3648,2.33042:0.587313,0.412763,0.0
+chr1	4811609	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=4811650;RU=ga;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.795355:21,21:19-21,19-21:6,12,0,6:21,6:4,1|8,1|12,1|14,1|15,1|16,1:187.852:366.612,131.36:0.825531,0.825531:1.10236e-12,0.124233,0.875868	0/0:48:0.999961:21,21:19-21,19-21:25,13,0,9:19,2|20,2|21,21:5,1|8,1|11,2|12,2|16,1|17,1|21,1:310.978:326.675,113.385:0.339533,0.339533:0.0,4.87385e-05,0.999955
+chr1	4811806	.	TTTTGTTTTGTTTTG	.	.	.	END=4811820;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:26,9,0,3:3,26:2,3:205.931:366.612,131.36:0.0,0.0:0.0,2.39576e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:29,10,0,4:3,29:2,4:232.858:326.675,113.385:0.0,0.0:0.0,3.1766e-09,1.0
+chr1	4814327	.	AAATAAATAAAT	AAATAAAT	.	.	END=4814338;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:26:0.999999:2,3:2-2,2-3:12,14,0,0:2,9|3,3:NULL:181.575:366.612,131.36:0.0,0.36513:8.4454e-07,1.0,1.92825e-22	0/0:22:0.998738:3,3:3-3,3-3:13,9,0,0:3,13:NULL:134.801:326.675,113.385:0.0,0.0:6.24e-42,0.000728609,0.999272
+chr1	4815548	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4815577;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.978896:16,16:13-16,13-16:13,7,0,2:15,2|16,11:11,1|13,1:143.644:366.612,131.36:1.12671,1.12671:5.2269e-24,0.00115283,0.998853	0/0:38:0.99597:15,15:15-15,15-15:16,12,0,10:14,2|15,14:5,2|6,2|8,1|10,1|11,1|12,1|13,1|14,1:267.548:326.675,113.385:0.0990099,0.0990099:7.71523e-18,0.00342976,0.99658
+chr1	4817565	.	CAGCAGCAGCAG	.	.	.	END=4817576;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999968:4,4:4-4,4-4:19,22,0,0:4,19:NULL:273.457:366.612,131.36:0.0,0.0:0.0,3.97051e-05,0.999963	0/0:46:1.0:4,4:4-4,4-4:29,17,0,0:4,29:NULL:271.562:326.675,113.385:0.0,0.0:0.0,2.73496e-08,1.0
+chr1	4819449	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=4819472;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.630721:4,4:3-4,3-4:4,13,0,2:4,4:3,2:153.492:366.612,131.36:0.330165,0.330165:0.92114,0.0789544,1.7293e-13	0/0:38:0.999954:6,6:6-8,6-8:16,13,0,8:6,16:2,1|3,1|4,1|5,5:240.238:326.675,113.385:0.797014,0.797014:3e-45,2.72189e-05,0.999972
+chr1	4820555	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4820572;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99982:10,10:10-10,10-10:16,10,0,5:10,16:6,1|7,2|9,2:200.216:366.612,131.36:0.0,0.0:0.0,2.30314e-05,0.999979	0/2:62:0.351083:9,12:9-9,9-14:31,20,0,10:9,31:4,3|5,3|6,1|7,1|12,2:410.123:326.675,113.385:0.0,1.53456:0.0,1.54242e-14,1.0
+chr1	4822262	.	TGTTTGTTTGTT	TGTT	.	.	END=4822273;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.0821131:1,1:1-3,1-3:0,25,0,0:NULL:NULL:224.832:366.612,131.36:0.556749,0.556749:0.273043,0.514863,0.212099	0/0:43:1.0:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.716:326.675,113.385:0.0,0.0:0.0,6.86054e-07,1.0
+chr1	4822494	.	CACACACACACA	.	.	.	END=4822505;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:29,13,0,0:6,29:NULL:234.205:366.612,131.36:0.0,0.0:0.0,1.70101e-08,1.0	0/0:51:1.00001:6,6:6-7,6-7:23,20,0,7:6,23:4,1|5,5|6,1:327.044:326.675,113.385:0.169767,0.169767:0.0,2.23788e-07,1.0
+chr1	4823989	.	TGTCTGTCTGTCTGTCTGTCTGTC	TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC	.	.	END=4824012;RU=tgtc;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.00001:8,8:8-8,8-8:22,11,0,7:8,22:2,1|3,2|4,1|5,1|6,2:243.729:366.612,131.36:0.0990099,0.0990099:0.0,3.8867e-07,1.0	0/0:36:1.00001:6,6:6-6,6-6:21,12,0,3:6,21:3,1|5,2:217.679:326.675,113.385:0.0,0.0:0.0,1.83163e-06,1.0
+chr1	4831112	.	CTGGCTGGCTGG	.	.	.	END=4831123;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:275.992:366.612,131.36:0.0,0.0:0.0,5.25396e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:30,10,0,0:3,30:NULL:208.27:326.675,113.385:0.0,0.0:0.0,5.0826e-09,1.0
+chr1	4832670	.	CTCCCTCCCTCC	CTCCCTCCCTCCCTCC	.	.	END=4832681;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:25,23,0,2:3,25:2,2:329.873:366.612,131.36:0.0,0.0:0.0,1.7607e-07,1.0	0/1:48:0.359416:3,4:3-3,3-4:23,22,0,3:3,23:2,2|4,1:343.057:326.675,113.385:0.0,0.519212:0.0,5.03971e-08,1.0
+chr1	4835862	.	TTTTGTTTTGTTTTG	.	.	.	END=4835876;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:194.431:366.612,131.36:0.0,0.0:0.0,1.38502e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:199.012:326.675,113.385:0.0,0.0:0.0,2.26284e-08,1.0
+chr1	4836013	.	TTTCTTTTCTTTTCT	.	.	.	END=4836027;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.99706:3,3:3-3,3-3:11,10,0,2:3,11:2,2:144.957:366.612,131.36:0.0,0.0:4.62434e-36,0.00126048,0.998746	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:199.94:326.675,113.385:0.0,0.0:0.0,7.37652e-07,1.0
+chr1	4836682	.	TTTATTTATTTA	.	.	.	END=4836693;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999993:3,3:3-3,3-3:19,17,0,0:3,19:NULL:231.07:366.612,131.36:0.0,0.0:0.0,1.7298e-05,0.999986	0/0:33:0.999991:3,3:3-3,3-3:18,13,0,2:3,18:2,2:204.284:326.675,113.385:0.0,0.0:0.0,1.45272e-05,0.999987
+chr1	4837261	.	TTCATTCATTCATTCATTCA	TTCA	.	.	END=4837280;RU=ttca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0690482:1,1:1-1,1-1:0,16,0,0:NULL:NULL:142.057:366.612,131.36:0.19802,0.19802:0.394443,0.481659,0.12399	0/0:20:0.99859:5,5:5-5,5-5:13,7,0,0:5,13:NULL:113.046:326.675,113.385:0.0,0.0:8.49476e-37,0.000864304,0.999141
+chr1	4840709	.	AATAAATAAATA	.	.	.	END=4840720;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999165:3,3:3-3,3-3:13,16,0,0:3,13:NULL:199.55:366.612,131.36:0.0,0.0:1.36e-43,0.000665667,0.999339	0/0:22:0.951778:3,3:3-3,3-3:8,14,0,0:3,8:NULL:157.058:326.675,113.385:0.0,0.0:1.58998e-26,0.0305701,0.969486
+chr1	4841846	.	AAAGAAAGAAAG	AAAGAAAG	.	.	END=4841857;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.00001:2,2:2-2,2-2:22,14,0,0:2,22:NULL:212.561:366.612,131.36:0.0,0.0:1.0,7.47019e-07,0.0	0/0:20:0.999869:3,3:3-3,3-3:16,4,0,0:3,16:NULL:102.145:326.675,113.385:0.0,0.0:0.0,6.76053e-05,0.999933
+chr1	4843541	.	TTTGTTTGTTTG	.	.	.	END=4843552;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:240.43:366.612,131.36:0.0,0.0:0.0,1.4138e-08,1.0	0/0:26:1.00001:3,3:3-3,3-3:20,4,0,2:3,20:2,2:127.33:326.675,113.385:0.0,0.0:0.0,2.47031e-06,1.0
+chr1	4844779	.	AAAATAAAATAAAAT	.	.	.	END=4844793;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999617:3,3:3-3,3-3:15,11,0,0:3,15:NULL:162.206:366.612,131.36:0.0,0.0:6.3e-44,0.000244671,0.999758	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.43:326.675,113.385:0.0,0.0:0.0,2.47012e-06,1.0
+chr1	4845843	.	AAACAAACAAACAAACAAAC	.	.	.	END=4845862;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:5,5:5-5,5-5:23,27,0,2:5,23:3,1|4,1:355.553:366.612,131.36:0.0,0.0:0.0,5.15931e-07,1.0	0/0:36:0.999957:5,5:5-5,5-5:17,14,0,5:5,17:3,3|4,2:229.622:326.675,113.385:0.0,0.0:0.0,2.45349e-05,0.999978
+chr1	4846452	.	CCAACCAACCAA	.	.	.	END=4846463;RU=ccaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.981252:3,3:3-3,3-3:9,11,0,2:3,9:2,2:146.9:366.612,131.36:0.0,0.0:1.18375e-29,0.00809632,0.991921	0/0:21:0.99958:3,3:3-3,3-3:14,5,0,2:3,14:2,2:113.893:326.675,113.385:0.0,0.0:0.0,0.000159645,0.999842
+chr1	4848400	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4848435;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:7,7:7-7,7-7:21,25,0,5:7,21:3,1|4,2|5,1|6,1:348.189:366.612,131.36:0.0,0.0:1.0,1.1066e-06,0.0	0/0:34:0.977879:9,9:8-9,8-9:9,15,0,9:9,9:3,1|5,2|6,2|7,2|8,2:239.873:326.675,113.385:0.437216,0.437216:9.02383e-25,0.011419,0.988606
+chr1	4849030	.	AAAGAAAGAAAGAAAG	.	.	.	END=4849045;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:245.114:366.612,131.36:0.0,0.0:0.0,2.42971e-06,1.0	0/0:30:0.999962:4,4:4-4,4-4:18,12,0,0:4,18:NULL:181.991:326.675,113.385:0.0,0.0:0.0,4.23994e-05,0.999957
+chr1	4849772	.	CAACAACAACAACAACAACAACAACAA	CAACAACAACAACAA	.	.	END=4849798;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999796:5,5:5-5,5-5:16,10,0,0:5,16:NULL:158.209:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:38:1.0:9,9:9-9,9-9:20,14,0,3:9,20:4,1|5,1|7,1:234.633:326.675,113.385:0.0990099,0.0990099:0.0,1.02211e-05,0.999993
+chr1	4850587	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4850616;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.935192:22,24:22-26,24-26:7,7,0,11:22,2|24,5:4,1|8,1|10,2|13,1|16,1|18,1|19,1|20,1|23,1|24,1:190.511:366.612,131.36:1.82006,0.507951:0.0,0.0,1.0	0/0:27:0.504365:15,15:12-15,12-15:8,8,0,9:14,2|15,6:9,1|11,2|13,3|14,3:186.57:326.675,113.385:0.877565,0.877565:1.92327e-06,0.477716,0.522377
+chr1	4858043	.	GGGCCGGGCCGGGCCGGGCC	GGGCCGGGCCGGGCC	.	.	END=4858062;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:54:1.0:3,4:3-4,4-4:35,19,0,0:3,6|4,29:NULL:341.472:366.612,131.36:0.390807,0.0:0.0,1.0,3.05897e-06	0/0:46:1.0:4,4:4-4,4-4:31,11,0,4:4,31:3,4:261.334:326.675,113.385:0.0,0.0:0.0,2.28666e-09,1.0
+chr1	4858328	.	GCTGCTGCTGCT	.	.	.	END=4858339;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:29,23,0,3:4,29:3,3:364.467:366.612,131.36:0.0,0.0:0.0,5.83154e-09,1.0	0/0:40:1.0:4,4:4-4,4-4:30,10,0,0:4,30:NULL:212.965:326.675,113.385:0.0,0.0:0.0,7.88224e-09,1.0
+chr1	4859454	.	CAAACAAACAAA	.	.	.	END=4859465;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.997279:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.94:366.612,131.36:0.0,0.0:1.15188e-38,0.00183885,0.998169	0/0:9:0.96338:3,3:3-3,3-3:8,1,0,0:3,8:NULL:42.1661:326.675,113.385:0.0,0.0:2.92369e-26,0.0150861,0.984943
+chr1	4859713	.	CTCTCTCTCTCTCTCT	.	.	.	END=4859728;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997518:8,8:8-8,8-8:13,12,0,0:8,13:NULL:164.513:366.612,131.36:0.0,0.0:6.90662e-25,0.0017479,0.99826	0/0:26:0.957459:8,8:8-8,8-8:8,16,0,2:8,8:5,1|7,1:195.057:326.675,113.385:0.0,0.0:8.91426e-16,0.0212945,0.978746
+chr1	4861410	.	TTCTTTCTTTCT	.	.	.	END=4861421;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:224.402:366.612,131.36:0.0,0.0:0.0,2.06593e-08,1.0	0/0:23:0.999288:3,3:3-3,3-3:13,7,0,3:3,13:2,3:138.485:326.675,113.385:0.0,0.0:1.7e-44,0.000239742,0.999765
+chr1	4862097	.	ACACACACACACACACAC	.	.	.	END=4862114;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:9,9:9-9,9-9:26,20,0,4:9,26:6,1|7,2|8,1:325.837:366.612,131.36:0.172061,0.172061:0.0,4.50161e-08,1.0	0/0:34:0.988749:9,9:7-9,7-9:17,10,0,6:8,2|9,15:5,1|6,4|7,1:219.231:326.675,113.385:0.631028,0.631028:3.55181e-24,0.0112089,0.988814
+chr1	4862140	.	ACACACACACACAC	ACACACACACACACACAC	.	.	END=4862153;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.475531:7,9:7-7,8-9:16,22,0,5:7,16:8,4|9,1:320.291:366.612,131.36:0.0,0.510837:0.0,2.3204e-33,1.0	0/0:20:0.976578:7,7:7-7,7-7:9,11,0,0:7,9:NULL:141.55:326.675,113.385:0.0,0.0:2.90656e-20,0.0134479,0.986579
+chr1	4864608	.	AAACAAACAAAC	.	.	.	END=4864619;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,10,0,2:3,25:2,2:205.564:366.612,131.36:0.0,0.0:0.0,1.127e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:153.582:326.675,113.385:0.0,0.0:0.0,1.29397e-06,1.0
+chr1	4866501	.	CCAGGCTGGCCTCCAGGCTGGCCTCCAGGCTGGCCT	CCAGGCTGGCCTCCAGGCTGGCCT	.	.	END=4866536;RU=ccaggctggcct;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999145:2,2:2-2,2-2:13,12,0,0:2,13:NULL:158.09:366.612,131.36:0.0,0.0:0.999728,0.000272618,2.5201e-19	0/0:22:0.999134:3,3:3-3,3-3:14,6,0,2:3,14:2,2:130.066:326.675,113.385:0.0,0.0:1.10892e-17,0.000575615,0.99943
+chr1	4867295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4867334;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.102623:22,23:10-23,10-24:0,18,0,14:NULL:5,1|6,2|7,2|8,1|10,2|16,1|17,2|20,2|22,1:279.652:366.612,131.36:2.91557,2.97962:1.37974e-22,0.306397,0.693615	0/0:43:0.943524:20,20:7-21,7-21:9,20,0,11:20,9:7,1|8,3|10,1|12,1|13,1|15,3|19,1:314.66:326.675,113.385:6.33959,6.33959:2.54871e-11,0.028072,0.971984
+chr1	4867339	.	TACATACATACATACA	TACATACATACATACATACA	.	.	END=4867354;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999979:5,5:5-5,5-5:27,21,0,2:4,2|5,25:3,2:323.082:366.612,131.36:0.0,0.0:0.0,4.58403e-08,1.0	0/0:39:1.0:4,4:4-4,4-4:19,17,0,3:4,19:3,3:256.592:326.675,113.385:0.0,0.0:0.0,1.11741e-05,0.999993
+chr1	4870254	.	TATTTATTTATT	.	.	.	END=4870265;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999596:3,3:3-3,3-3:14,14,0,3:3,14:2,3:203.164:366.612,131.36:0.0,0.0:1e-45,0.000216245,0.999788	0/0:27:0.999891:3,3:3-3,3-3:16,8,0,3:3,16:2,3:156.429:326.675,113.385:0.0,0.0:0.0,4.43e-05,0.999956
+chr1	4871522	.	TCCTCCTCCTCC	.	.	.	END=4871533;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:4,4:4-4,4-4:31,29,0,0:4,31:NULL:387.375:366.612,131.36:0.0,0.0:0.0,6.72445e-09,1.0	0/0:47:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:253.255:326.675,113.385:0.0,0.0:0.0,5.23008e-10,1.0
+chr1	4874307	.	GGAAGGAAGGAA	.	.	.	END=4874318;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999255:3,3:3-3,3-3:14,13,0,0:3,14:NULL:179.186:366.612,131.36:0.0,0.0:1e-45,0.000496271,0.999507	0/0:22:0.999929:3,3:3-3,3-3:17,5,0,0:3,17:NULL:113.657:326.675,113.385:0.0,0.0:0.0,3.86341e-05,0.999963
+chr1	4874466	.	AACAACAACAACAAC	AACAACAACAAC	.	.	END=4874480;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:37:0.993994:4,5:4-5,5-5:17,20,0,0:4,3|5,14:NULL:266.538:366.612,131.36:0.398507,0.0:1.51296e-36,0.993994,0.00601875	0/0:20:0.993029:5,5:4-5,4-5:11,8,0,0:5,11:NULL:115.916:326.675,113.385:0.492866,0.492866:1.06517e-32,0.00475677,0.995257
+chr1	4877242	.	TATTTATTTATTTATT	TATT,TATTTATTTATT	.	.	END=4877257;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:6:0.0150407:1,3:1-3,1-3:0,6,0,0:NULL:NULL:53.3083:366.612,131.36:0.825769,0.877677:0.0641034,0.438012,0.498075	0/0:18:0.999635:4,4:4-4,4-4:15,3,0,0:4,15:NULL:86.5963:326.675,113.385:0.0,0.0:3e-45,0.000210023,0.99979
+chr1	4878697	.	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	.	.	END=4878766;RU=ctctt;PERIOD=5;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.98803:13,13:13-13,13-13:10,13,0,11:13,10:2,2|4,1|6,1|8,1|9,2|10,1|11,3:246.043:366.612,131.36:0.0,0.0:0.996172,0.00383706,7.51694e-21	0/0:27:0.869346:14,14:13-14,13-14:6,9,0,11:14,6:2,1|3,2|5,2|7,1|10,1|11,1|12,3:187.457:326.675,113.385:0.495841,0.495841:3.7595e-17,0.0802297,0.919866
+chr1	4878791	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	END=4878822;RU=ctcc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.227777:10,10:3-10,3-10:5,14,0,0:10,5:NULL:149.658:366.612,131.36:3.15514,3.15514:4.32064e-13,0.665501,0.334514	0/0:13:0.385621:8,8:6-8,6-8:3,10,0,0:8,3:NULL:108.263:326.675,113.385:0.592572,0.592572:5.86256e-05,0.414281,0.585739
+chr1	4880388	.	CTTCTTCTTCTT	.	.	.	END=4880399;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99948:4,4:4-4,4-4:15,16,0,0:4,15:NULL:206.169:366.612,131.36:0.0,0.0:0.0,0.000409236,0.999591	0/0:36:1.0:4,4:4-4,4-4:23,13,0,0:4,23:NULL:208.752:326.675,113.385:0.0,0.0:0.0,1.05248e-06,1.0
+chr1	4881181	.	TGTTTTGTTTTGTTT	.	.	.	END=4881195;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:27,27,0,0:3,27:NULL:352.532:366.612,131.36:0.0,0.0:0.0,1.58999e-07,1.0	0/0:21:0.999866:3,3:2-3,2-3:16,4,0,0:3,16:NULL:98.8823:326.675,113.385:0.44763,0.44763:0.0,7.15648e-05,0.999932
+chr1	4882279	.	TTATTATTATTA	.	.	.	END=4882290;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.407704:4,4:3-4,3-4:3,11,0,0:4,3:NULL:117.024:366.612,131.36:0.169767,0.169767:7.928e-10,0.348483,0.65155	0/0:14:0.910161:4,4:4-4,4-4:7,7,0,0:4,7:NULL:89.739:326.675,113.385:0.0,0.0:1.5882e-21,0.056422,0.943661
+chr1	4885247	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATC,TATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=4885286;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.950189:8,9:8-10,9-9:15,17,0,3:8,3|9,12:4,1|6,1|7,1:247.157:366.612,131.36:0.653465,0.0:0.999994,7.2535e-06,3.8647e-26	0/0:34:0.973807:10,10:10-11,10-11:9,15,0,9:10,9:3,2|4,1|6,2|7,2|9,2:249.563:326.675,113.385:0.425627,0.425627:4.41641e-18,0.0157938,0.984241
+chr1	4885324	.	TTAGTTAGTTAGTTAGTTAGTTAG	TTAGTTAGTTAGTTAGTTAG,TTAGTTAGTTAGTTAGTTAGTTAGTTAG	.	.	END=4885347;RU=ttag;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:38:0.874592:5,7:5-7,7-7:18,12,0,7:5,2|7,16:3,4|4,3:251.737:366.612,131.36:0.899738,0.0:6.23911e-39,0.87467,0.125428	0/0:33:0.998726:6,6:5-6,5-6:13,13,0,6:6,13:3,2|5,4:218.947:326.675,113.385:0.40582,0.40582:1.3011e-26,0.000756045,0.999248
+chr1	4890962	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4890997;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.0:8,8:8-8,8-8:19,7,0,7:8,19:2,1|3,4|6,1|7,1:192.509:366.612,131.36:0.0,0.0:0.999993,9.55034e-06,7.84969e-35	0/0:38:1.00001:9,9:9-9,9-9:22,10,0,5:9,22:2,1|3,1|4,1|8,2:219.858:326.675,113.385:0.0990099,0.0990099:0.0,1.1242e-06,1.0
+chr1	4894530	.	GTTGGTTGGTTG	.	.	.	END=4894541;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:23,21,0,2:3,23:2,2:290.005:366.612,131.36:0.0,0.0:0.0,5.67316e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:213.064:326.675,113.385:0.0,0.0:0.0,4.05818e-07,1.0
+chr1	4895853	.	CTCACTCACTCA	.	.	.	END=4895864;RU=ctca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999177:3,3:3-3,3-3:13,11,0,0:3,13:NULL:150.405:366.612,131.36:0.0,0.0:7.8e-44,0.000490639,0.999514	0/0:32:0.999992:3,3:3-3,3-3:18,14,0,0:3,18:NULL:199.106:326.675,113.385:0.0,0.0:0.0,1.80082e-05,0.999985
+chr1	4899661	.	ACACACACACACACAC	ACACACACACACAC	.	.	END=4899676;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.00001:7,7:7-7,7-7:22,19,0,4:7,22:5,1|6,2|7,1:294.528:366.612,131.36:0.0990099,0.0990099:1.0,1.37938e-06,1.61122e-33	0/0:41:0.999948:8,8:8-8,8-8:26,12,0,2:7,2|8,24:6,2:240.928:326.675,113.385:0.0990099,0.0990099:3.6123e-41,5.54085e-05,0.999948
+chr1	4902415	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=4902432;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.881129:9,9:8-10,8-10:7,11,0,2:9,7:6,1|8,1:146.361:366.612,131.36:0.696456,0.696456:1.12057e-12,0.0606104,0.939477	0/0:24:0.99869:9,9:9-12,9-12:14,7,0,2:9,14:7,2:137.093:326.675,113.385:1.27688,1.27688:1.593e-24,0.000449994,0.999553
+chr1	4902708	.	TGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG	.	.	END=4902725;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.413074:7,7:5-7,5-7:3,14,0,2:7,3:5,2:154.668:366.612,131.36:0.634282,0.634282:0.822065,0.178005,7.49676e-08	0/0:16:0.866791:9,9:9-10,9-10:7,8,0,0:9,7:NULL:102.351:326.675,113.385:0.486863,0.486863:2.29488e-12,0.0699126,0.930182
+chr1	4903639	.	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	.	.	END=4903674;RU=tttttg;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.239431:7,7:4-7,4-7:2,10,0,0:7,2:NULL:101.832:366.612,131.36:0.949876,0.949876:3.28881e-07,0.444397,0.555709	0/0:28:0.999917:6,6:6-6,6-6:17,9,0,2:6,17:3,1|5,1:173.895:326.675,113.385:0.0,0.0:0.0,6.41162e-05,0.99994
+chr1	4903855	.	TTTGTTTGTTTG	.	.	.	END=4903866;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:185.345:366.612,131.36:0.0,0.0:0.0,7.09136e-06,0.999994	0/0:24:0.990731:3,3:3-3,3-3:10,14,0,0:3,10:NULL:170.769:326.675,113.385:0.0,0.0:5.87266e-34,0.00569124,0.994324
+chr1	4905039	.	TACATACATACA	.	.	.	END=4905050;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:23,13,0,0:3,23:NULL:208.626:366.612,131.36:0.0,0.0:0.0,6.88669e-07,1.0	0/0:28:1.0:3,3:3-3,3-3:19,6,0,3:3,19:2,3:151.536:326.675,113.385:0.0,0.0:0.0,5.64564e-06,0.999995
+chr1	4905095	.	TGGATGGATGGA	.	.	.	END=4905106;RU=tgga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999923:3,3:3-3,3-3:17,12,0,0:3,17:NULL:174.614:366.612,131.36:0.0,0.0:0.0,4.30267e-05,0.999957	0/0:31:1.0:3,3:3-3,3-3:25,4,0,2:3,25:2,2:148.365:326.675,113.385:0.0,0.0:0.0,8.21081e-08,1.0
+chr1	4909777	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4909828;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.430922:25,27:13-25,13-27:9,7,0,15:25,9:5,1|6,1|7,1|10,1|14,1|15,1|16,1|17,2|19,3|23,1|25,1|27,1:229.804:366.612,131.36:4.01858,5.57861:4.85751e-06,0.999988,1.00647e-05	0/3:37:0.321447:26,36:25-26,25-36:5,15,0,17:25,2|26,3:6,3|11,1|12,2|13,2|14,2|15,1|17,1|20,1|22,1|24,1|25,1|33,1:305.858:326.675,113.385:0.284901,4.78637:2.06714e-08,0.0110324,0.988992
+chr1	4909833	.	ATGCATGCATGC	.	.	.	END=4909844;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997586:3,3:3-3,3-3:12,13,0,0:3,12:NULL:161.285:366.612,131.36:0.0,0.0:1.12194e-39,0.00116656,0.998838	0/0:33:0.999905:3,3:3-3,3-3:16,17,0,0:3,16:NULL:217.664:326.675,113.385:0.0,0.0:0.0,7.34374e-05,0.999926
+chr1	4914303	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4914366;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.963093:13,13:13-13,13-13:8,20,0,13:13,8:3,1|4,2|5,1|8,1|9,1|10,2|11,1|12,4:314.081:366.612,131.36:0.0,0.0:0.995673,0.00433868,3.36631e-24	0/0:26:0.640366:16,16:15-16,15-16:4,12,0,9:16,4:3,1|5,1|9,1|12,1|13,3|14,1|15,1:192.607:326.675,113.385:0.499779,0.499779:4.19595e-09,0.200213,0.79983
+chr1	4914896	.	GGAGGAGGAGGA	.	.	.	END=4914907;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:21,28,0,0:4,21:NULL:340.103:366.612,131.36:0.0,0.0:0.0,6.01108e-06,0.999995	0/0:23:0.93709:4,4:4-4,4-4:8,15,0,0:4,8:NULL:166.795:326.675,113.385:0.0,0.0:8.34997e-25,0.0488196,0.951257
+chr1	4916037	.	TACATACATACATACA	.	.	.	END=4916052;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:4,4:4-4,4-4:30,25,0,3:4,30:3,3:372.561:366.612,131.36:0.0,0.0:0.0,5.3936e-09,1.0	0/0:48:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,2|4,1:275.235:326.675,113.385:0.0,0.0:0.0,7.53442e-10,1.0
+chr1	4918464	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	.	END=4918491;RU=ggag;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.974661:7,7:7-7,7-7:9,16,0,3:7,9:2,1|3,1|6,1:208.115:366.612,131.36:0.0,0.0:4.71002e-17,0.0165889,0.983445	0/0:23:0.935308:7,7:7-7,7-7:8,15,0,0:7,8:NULL:175.432:326.675,113.385:0.29703,0.29703:2.75131e-15,0.0517317,0.948348
+chr1	4918494	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GA,GAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4918545;RU=ga;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:5:0.00284588:1,9:1-13,1-13:0,5,0,0:NULL:NULL:45.8483:366.612,131.36:4.3402,4.33937:0.395201,0.511789,0.0931213	3/0:28:0.930118:25,26:21-26,21-26:6,14,0,7:25,3|26,3:5,1|8,2|10,2|11,1|21,1:212.74:326.675,113.385:1.98598,1.86701:0.00122754,0.952779,0.0460742
+chr1	4920839	.	TTATTATTATTA	.	.	.	END=4920850;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999195:4,4:2-4,2-4:14,7,0,0:4,14:NULL:119.597:366.612,131.36:0.973726,0.973726:7.7e-44,0.000479133,0.999523	0/0:18:0.998916:4,4:4-4,4-4:13,3,0,2:4,13:3,2:92.8638:326.675,113.385:0.0,0.0:9.477e-41,0.000412151,0.999591
+chr1	4920879	.	TGGCTGGCTGGC	.	.	.	END=4920890;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999941:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.755:366.612,131.36:0.0,0.0:4.2e-44,3.98504e-05,0.999963	0/0:18:0.995248:3,3:3-3,3-3:11,7,0,0:3,11:NULL:106.999:326.675,113.385:0.0,0.0:7.72716e-29,0.00241556,0.997593
+chr1	4920889	.	GCCAGCCAGCCA	.	.	.	END=4920900;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:3,3:3-3,3-3:19,8,0,0:3,19:NULL:148.616:366.612,131.36:0.0,0.0:0.0,9.76148e-06,0.999993	0/0:18:0.995246:3,3:3-3,3-3:11,7,0,0:3,11:NULL:107.018:326.675,113.385:0.0,0.0:3.17835e-37,0.00238722,0.997618
+chr1	4921013	.	ATTTATTTATTT	.	.	.	END=4921024;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.906659:3,3:3-3,3-3:6,20,0,0:3,6:NULL:204.332:366.612,131.36:0.0,0.0:1.3993e-19,0.0448965,0.955176	0/0:18:0.983079:3,3:3-3,3-3:9,9,0,0:3,9:NULL:115.759:326.675,113.385:0.0,0.0:8.49186e-29,0.00831875,0.991703
+chr1	4921202	.	TTCTTCTTCTTC	.	.	.	END=4921213;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999931:4,4:4-4,4-4:17,13,0,0:4,17:NULL:190.356:366.612,131.36:0.0,0.0:0.0,3.68238e-05,0.999964	0/0:16:0.996708:4,4:4-4,4-4:12,4,0,0:4,12:NULL:86.1021:326.675,113.385:0.0,0.0:6.54629e-39,0.00186305,0.998141
+chr1	4921293	.	ATTTATTTATTTATTT	.	.	.	END=4921308;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.983004:4,4:4-4,4-4:9,19,0,3:4,9:3,3:231.443:366.612,131.36:0.0,0.0:1.93803e-24,0.00857355,0.991448	0/0:24:0.996908:4,4:4-4,4-4:12,12,0,0:4,12:NULL:152.192:326.675,113.385:0.0,0.0:2.11086e-32,0.00229159,0.997715
+chr1	4922764	.	AAATAAATAAAT	.	.	.	END=4922775;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999992:3,3:3-3,3-3:18,12,0,0:3,18:NULL:180.383:366.612,131.36:0.0,0.0:0.0,1.69412e-05,0.999986	0/0:25:0.999375:3,3:3-3,3-3:14,9,0,2:3,14:2,2:161.812:326.675,113.385:0.0,0.0:1e-45,0.000258235,0.999743
+chr1	4925089	.	ATTCATTCATTCATTCATTC	.	.	.	END=4925108;RU=attc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.00001:5,5:5-5,5-5:21,26,0,3:5,21:4,3:340.176:366.612,131.36:0.0,0.0:0.0,2.28456e-06,1.0	0/0:51:1.0:5,5:5-5,5-5:25,19,0,7:5,25:3,1|4,5|5,1:319.377:326.675,113.385:0.0,0.0:0.0,7.26226e-08,1.0
+chr1	4930713	.	ATCTATCTATCT	.	.	.	END=4930724;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:30,21,0,4:3,30:2,4:335.927:366.612,131.36:0.0,0.0:0.0,3.17815e-09,1.0	0/0:30:0.999985:3,3:3-3,3-3:18,12,0,0:3,18:NULL:177.406:326.675,113.385:0.0,0.0:0.0,2.00988e-05,0.99998
+chr1	4931717	.	AGAGAGAGAGAGAG	AGAGAGAGAGAG	.	.	END=4931730;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:61:1.0:6,7:6-6,7-7:32,29,0,0:6,13|7,19:NULL:403.191:366.612,131.36:0.0990099,0.0:7.75488e-31,1.0,1.62485e-09	0/0:50:1.00001:7,7:7-8,7-8:22,21,0,6:7,22:5,4|6,2:328.993:326.675,113.385:0.21692,0.21692:1e-45,1.63351e-06,1.0
+chr1	4931731	.	ACACACACACAC	.	.	.	END=4931742;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.00001:6,6:5-7,5-7:20,31,0,5:6,20:5,3|6,2:390.258:366.612,131.36:0.342408,0.342408:0.0,1.01925e-06,1.0	0/0:41:1.0:6,6:6-6,6-6:21,20,0,0:6,21:NULL:267.481:326.675,113.385:0.0,0.0:0.0,8.48974e-06,0.999994
+chr1	4935229	.	CTCCCTCCCTCCCTCC	.	.	.	END=4935244;RU=ctcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:301.091:366.612,131.36:0.0990099,0.0990099:0.0,3.72473e-08,1.0	0/0:35:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:198.54:326.675,113.385:0.0,0.0:0.0,1.37551e-06,1.0
+chr1	4936747	.	AAACAAACAAAC	.	.	.	END=4936758;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:293.25:366.612,131.36:0.0,0.0:0.0,2.01391e-08,1.0	0/0:34:1.00001:3,3:3-3,3-3:22,10,0,2:3,22:2,2:194.602:326.675,113.385:0.0,0.0:0.0,8.6363e-07,1.0
+chr1	4937389	.	AACAACAACAACAACAAC	.	.	.	END=4937406;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:6,6:6-6,6-6:31,15,0,2:6,31:5,2:276.512:366.612,131.36:0.0,0.0:0.0,3.35845e-09,1.0	0/0:45:1.0:6,6:6-6,6-6:25,13,0,6:6,25:4,2|5,4:264.154:326.675,113.385:0.0,0.0:0.0,9.31293e-08,1.0
+chr1	4938098	.	AGAAAGAAAGAA	.	.	.	END=4938109;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:218.478:366.612,131.36:0.0,0.0:0.0,2.99825e-06,1.0	0/0:18:0.999394:3,3:3-3,3-3:14,4,0,0:3,14:NULL:92.2743:326.675,113.385:0.0,0.0:1e-45,0.000270359,0.999734
+chr1	4940874	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4940918;RU=aaaac;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.976025:9,9:8-9,8-9:9,14,0,9:9,9:2,1|3,1|4,2|5,2|6,2|8,1:234.928:366.612,131.36:0.46122,0.46122:4.70087e-25,0.0183276,0.98171	0/0:19:0.98792:9,9:9-9,9-9:10,5,0,4:9,10:3,1|5,1|6,1|7,1:119.203:326.675,113.385:0.0,0.0:6.96937e-28,0.00650601,0.993511
+chr1	4941227	.	TTGTTGTTGTTG	.	.	.	END=4941238;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:20,11,0,3:4,20:3,3:202.89:366.612,131.36:0.0,0.0:0.0,4.02136e-06,0.999995	0/0:25:0.999974:4,4:4-4,4-4:18,7,0,0:4,18:NULL:140.213:326.675,113.385:0.0,0.0:0.0,3.12652e-05,0.999971
+chr1	4941826	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4941867;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:48:0.869733:20,21:20-22,20-22:13,22,0,12:20,7|21,4|22,2:6,1|7,1|9,1|13,2|14,1|15,2|18,1|19,2|21,1:379.236:366.612,131.36:0.575281,0.55233:1.04935e-10,0.99145,0.00856707	0/2:38:0.304313:21,26:20-22,20-27:7,17,0,13:20,3|21,4:5,1|6,1|9,2|11,1|15,2|16,1|17,1|18,1|19,1|21,1|26,1:297.187:326.675,113.385:0.393557,2.53527:5.53095e-16,0.00150292,0.998504
+chr1	4943920	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=4943943;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:0.93824:12,12:11-12,11-12:18,32,0,14:11,4|12,14:4,1|5,2|6,2|8,1|9,3|10,3|11,2:491.696:366.612,131.36:0.460582,0.460582:1.00657e-17,0.0617049,0.938387	0/0:40:0.994255:12,12:9-12,9-12:12,17,0,9:12,12:4,2|5,1|6,1|7,1|8,1|9,3:280.274:326.675,113.385:1.09539,1.09539:4.15738e-18,0.00303051,0.99698
+chr1	4944834	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=4944857;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:6,6:6-6,6-6:24,24,0,10:6,24:2,1|3,3|4,4|5,2:388.368:366.612,131.36:0.0,0.0:0.0,2.95896e-07,1.0	0/0:28:0.99596:6,6:6-6,6-6:11,13,0,4:6,11:2,1|4,2|5,1:196.374:326.675,113.385:0.0,0.0:9.78336e-31,0.00239827,0.997609
+chr1	4946471	.	ATAACATATAACATATAACAT	.	.	.	END=4946491;RU=ataacat;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:25,20,0,0:3,25:NULL:283.248:366.612,131.36:0.0,0.0:0.0,3.02506e-07,1.0	0/0:23:0.999471:3,3:3-3,3-3:14,7,0,2:3,14:2,2:133.637:326.675,113.385:0.0,0.0:2.875e-42,0.000263905,0.999736
+chr1	4957150	.	AAACAAACAAAC	.	.	.	END=4957161;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:33,12,0,2:3,33:2,2:253.018:366.612,131.36:0.0,0.0:0.0,3.93596e-10,1.0	0/0:30:1.0:3,3:3-3,3-3:25,5,0,0:3,25:NULL:146.34:326.675,113.385:0.0,0.0:0.0,1.3194e-07,1.0
+chr1	4958201	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=4958218;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:33,9,0,0:3,33:NULL:219.278:366.612,131.36:0.0,0.0:0.0,5.27952e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:28,4,0,0:3,28:NULL:148.516:326.675,113.385:0.0,0.0:0.0,1.95092e-08,1.0
+chr1	4960946	.	ACACACACACACACACACACACAC	.	.	.	END=4960969;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.998459:12,12:12-13,12-13:14,14,0,5:12,14:5,2|9,2|11,1:228.619:366.612,131.36:0.19802,0.19802:9.682e-23,0.000546971,0.999454	0/0:29:0.991119:12,12:10-12,10-12:11,11,0,5:12,11:4,1|5,3|10,1:182.992:326.675,113.385:0.788731,0.788731:3.74833e-18,0.0052448,0.994768
+chr1	4967461	.	GGTGGTGGTGGT	.	.	.	END=4967472;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:4-4,4-4:30,22,0,2:4,30:3,2:335.899:366.612,131.36:0.0,0.0:0.0,5.93903e-09,1.0	0/0:38:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:231.014:326.675,113.385:0.0,0.0:0.0,2.10865e-06,1.0
+chr1	4967521	.	CTTGCTTGCTTG	.	.	.	END=4967532;RU=cttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:33,16,0,0:3,33:NULL:276.484:366.612,131.36:0.0990099,0.0990099:0.0,7.17683e-10,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:210.541:326.675,113.385:0.0,0.0:0.0,1.61021e-06,1.0
+chr1	4976938	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4976965;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:47:0.0489368:27,27:25-29,25-29:0,17,0,29:NULL:5,2|6,2|7,3|9,2|10,1|11,1|12,1|13,3|14,2|15,1|17,3|20,1|21,2|23,2|24,1|26,1|27,1:379.606:366.612,131.36:0.896245,0.896245:0.0,0.0,1.0	0/1:64:0.794639:14,15:14-14,14-15:35,14,0,15:13,2|14,31|15,2:5,2|6,1|7,3|8,4|9,1|11,2|12,1|15,1:416.39:326.675,113.385:0.0,0.498798:1.45964e-38,2.05051e-08,1.0
+chr1	4977099	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4977144;RU=ag;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0233624:22,22:21-26,21-26:0,9,0,9:NULL:6,1|8,1|11,1|12,2|13,2|18,1|22,1:149.084:366.612,131.36:1.98761,1.98761:0.11419,0.539167,0.346797	0/2:23:0.467761:23,24:22-24,22-24:8,11,0,4:22,2|23,4|24,2:6,1|10,1|13,1|21,1:180.98:326.675,113.385:0.479355,0.832743:0.00041485,0.339338,0.660268
+chr1	4977990	.	TCATCATCATCATCA	.	.	.	END=4978004;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999972:5,5:4-5,4-5:30,19,0,4:4,2|5,28:4,4:338.446:366.612,131.36:0.195027,0.195027:0.0,2.72889e-05,0.999972	0/0:31:0.999902:5,5:5-5,5-5:17,12,0,2:5,17:4,2:199.785:326.675,113.385:0.0,0.0:0.0,6.39382e-05,0.99994
+chr1	4983563	.	CATCATCATCAT	.	.	.	END=4983574;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:4,4:4-4,4-4:30,26,0,2:4,30:3,2:372.273:366.612,131.36:0.0,0.0:0.0,5.35047e-09,1.0	0/0:43:1.0:4,4:4-4,4-4:26,14,0,3:4,26:3,3:252.485:326.675,113.385:0.0,0.0:0.0,5.93857e-08,1.0
+chr1	4985196	.	TTTGTTTGTTTG	.	.	.	END=4985207;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:3,3:3-3,3-3:19,5,0,0:3,19:NULL:117.877:366.612,131.36:0.0,0.0:0.0,7.5934e-06,0.999994	0/0:44:1.0:3,3:3-3,3-3:30,11,0,3:3,30:2,3:240.878:326.675,113.385:0.0,0.0:0.0,2.65166e-09,1.0
+chr1	4996877	.	TATATATATATATATATA	TATATATATATATA	.	.	END=4996894;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.447467:7,7:5-7,5-7:4,19,0,0:7,4:NULL:192.185:366.612,131.36:0.658248,0.658248:0.876695,0.123405,3.28883e-09	0/0:15:0.909:9,9:5-9,5-9:8,6,0,0:9,8:NULL:85.502:326.675,113.385:1.94745,1.94745:2.03074e-09,0.0722748,0.92782
+chr1	4998367	.	CTCCCTCCCTCC	.	.	.	END=4998378;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:127.455:366.612,131.36:0.0,0.0:0.0,8.23697e-06,0.999994	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:148.076:326.675,113.385:0.0,0.0:0.0,9.50006e-06,0.999993
+chr1	5001697	.	TTTTGTTTTGTTTTG	.	.	.	END=5001711;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999987:3,3:3-3,3-3:19,21,0,0:3,19:NULL:274.069:366.612,131.36:0.0,0.0:0.0,1.95025e-05,0.99998	0/0:28:0.999795:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.747:326.675,113.385:0.0,0.0:0.0,0.000154956,0.999849
+chr1	5003140	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=5003167;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999859:13,13:13-13,13-13:23,24,0,3:12,2|13,21:8,1|9,1|10,1:344.393:366.612,131.36:0.0,0.0:1.0,1.05659e-06,1.4696e-27	0/0:46:0.998635:14,14:13-14,13-14:20,17,0,8:13,2|14,18:7,1|8,1|9,1|10,1|12,2|13,2:305.347:326.675,113.385:0.19802,0.19802:3.33707e-24,0.00138137,0.998625
+chr1	5005661	.	GAGGAGGAGGAG	.	.	.	END=5005672;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992028:4,4:4-4,4-4:11,11,0,0:4,11:NULL:141.326:366.612,131.36:0.0,0.0:1.67609e-36,0.00433231,0.99568	0/0:54:1.0:4,4:4-4,4-4:28,19,0,7:4,28:3,7:339.99:326.675,113.385:0.0,0.0:0.0,1.08848e-08,1.0
+chr1	5007022	.	TTTATTTTATTTTAT	.	.	.	END=5007036;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998728:3,3:3-3,3-3:13,12,0,0:3,13:NULL:164.765:366.612,131.36:0.0,0.0:1.547e-42,0.000819146,0.999187	0/0:20:0.999989:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.73:326.675,113.385:0.0,0.0:0.0,1.56403e-05,0.999986
+chr1	5008480	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=5008511;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999985:7,7:7-7,7-7:18,17,0,7:7,18:2,1|4,5|6,1:280.991:366.612,131.36:0.0,0.0:0.999987,1.30011e-05,1.28651e-33	0/0:43:1.0:8,8:8-8,8-8:20,15,0,8:8,20:3,1|4,3|5,1|6,2|7,1:279.858:326.675,113.385:0.0,0.0:0.0,5.71248e-06,0.999995
+chr1	5011517	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA	.	.	END=5011560;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.781628:21,21:20-21,20-21:10,16,0,16:20,2|21,8:4,1|5,1|6,1|7,2|8,2|11,2|14,1|15,1|16,2|17,1|18,1|19,1:329.553:366.612,131.36:0.35561,0.35561:0.986623,0.0134052,2.41062e-08	0/0:37:0.998362:22,22:22-22,22-22:14,7,0,14:22,14:5,2|8,1|13,2|14,1|17,2|18,2|20,1|21,2|22,1:244.354:326.675,113.385:0.139319,0.139319:5.65472e-23,0.000382178,0.999621
+chr1	5011684	.	AAAACAAAACAAAACAAAAC	.	.	.	END=5011703;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:4,4:4-4,4-4:17,19,0,3:4,17:2,1|3,2:265.456:366.612,131.36:0.0,0.0:0.0,4.14353e-05,0.999963	0/0:29:1.0:4,4:4-4,4-4:19,7,0,3:4,19:3,3:161.314:326.675,113.385:0.0,0.0:0.0,5.98742e-06,0.999995
+chr1	5012007	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=5012062;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.0683737:10,12:1-13,1-13:0,18,0,7:NULL:5,1|6,1|7,2|8,1|12,2:219.863:366.612,131.36:3.69494,2.58175:0.597251,0.37845,0.0244016	0/0:25:0.882252:14,14:14-14,14-14:6,11,0,8:14,6:5,2|8,1|11,3|12,2:186.386:326.675,113.385:0.355334,0.355334:4.35448e-15,0.0746844,0.92541
+chr1	5013650	.	CAGAGCAGAGCAGAGCAGAGCAGAGCAGAG	CAGAGCAGAGCAGAGCAGAGCAGAG	.	.	END=5013679;RU=cagag;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999973:5,5:5-5,5-5:18,12,0,2:5,18:4,2:195.346:366.612,131.36:0.0,0.0:0.999986,1.7778e-05,5.31604e-39	0/0:32:0.925409:6,6:5-6,5-6:19,9,0,4:5,2|6,17:3,2|4,1|5,1:194.947:326.675,113.385:0.442564,0.442564:0.0,0.0746917,0.925404
+chr1	5014848	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5014891;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:0.591369:26,26:25-27,25-27:11,24,0,26:25,3|26,8:5,3|6,1|9,2|10,2|13,2|15,1|16,2|17,2|18,3|20,5|21,1|22,1|24,1:478.783:366.612,131.36:0.515042,0.515042:0.0,0.0,1.0	0/0:61:0.836759:22,22:21-23,21-23:18,23,0,18:21,3|22,12|23,3:6,1|7,1|8,1|9,1|10,2|11,2|14,1|15,1|16,1|17,3|18,1|21,3:450.295:326.675,113.385:0.661665,0.661665:1.00629e-12,0.0123263,0.987699
+chr1	5019542	.	CGCTCGCTCGCT	.	.	.	END=5019553;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:3,3:3-3,3-3:28,33,0,3:3,28:2,3:436.889:366.612,131.36:0.0,0.0:0.0,1.82732e-08,1.0	0/0:57:1.0:3,3:3-3,3-3:37,18,0,2:3,37:2,2:329.618:326.675,113.385:0.0,0.0:0.0,5.87802e-11,1.0
+chr1	5020039	.	GCCAGCCAGCCA	.	.	.	END=5020050;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:81:1.0:3,3:3-3,3-3:50,31,0,0:3,50:NULL:489.516:366.612,131.36:0.0,0.0:0.0,1.08271e-14,1.0	0/0:64:1.0:3,3:3-3,3-3:53,11,0,0:3,53:NULL:310.857:326.675,113.385:0.0,0.0:0.0,1.15808e-15,1.0
+chr1	5022514	.	TTGTTGTTGTTG	.	.	.	END=5022525;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999007:4,4:4-4,4-4:14,13,0,0:4,14:NULL:169.733:366.612,131.36:0.0,0.0:0.0,0.000700097,0.999302	0/0:32:1.00001:4,4:4-4,4-4:21,11,0,0:4,21:NULL:181.785:326.675,113.385:0.0,0.0:0.0,3.66862e-06,1.0
+chr1	5023422	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5023467;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:0.928802:18,18:17-18,17-18:20,29,0,12:17,5|18,15:5,1|6,1|8,1|10,3|11,2|12,1|13,1|14,2:459.163:366.612,131.36:0.36513,0.36513:1.0,0.0,0.0	0/0:71:0.990676:23,23:12-23,12-23:17,30,0,22:22,3|23,14:4,1|6,2|7,3|8,3|9,1|11,2|12,3|13,1|15,1|17,2|21,3:533.46:326.675,113.385:5.35709,5.35709:2.13956e-14,0.00902075,0.991
+chr1	5024078	.	AATAATAATAATAATAATAATAATAATAATAATAATAATAAT	.	.	.	END=5024119;RU=aat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.867285:14,14:14-14,14-14:6,9,0,8:14,6:6,2|8,3|12,1|13,2:167.018:366.612,131.36:0.0,0.0:8.86682e-10,0.0435721,0.956499	0/0:21:0.719744:14,14:12-14,12-14:5,5,0,9:14,5:4,1|5,1|6,2|8,1|9,1|10,1|11,1|13,1:140.5:326.675,113.385:0.765136,0.765136:3.24644e-08,0.164517,0.835557
+chr1	5026610	.	CTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5026631;RU=ct;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:40:0.995281:9,13:9-9,12-13:10,23,0,4:9,8|13,2:4,1|7,1|10,1|12,1:294.328:366.612,131.36:0.0,0.611622:1.05571e-11,1.0,2.1268e-14	0/0:22:0.996622:11,11:11-12,11-12:12,6,0,3:11,12:8,1|10,2:129.641:326.675,113.385:0.284901,0.284901:1.52129e-18,0.00103294,0.998968
+chr1	5030577	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCC,TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=5030644;RU=tccc;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.00122163:1,1:1-1,1-1:0,2,0,0:NULL:NULL:16.7026:366.612,131.36:0.0,0.0:0.157866,0.613891,0.228323	2/2:5:0.0282725:10,10:5-10,5-10:0,0,0,4:NULL:3,1|4,1|7,1|10,1:29.1062:326.675,113.385:2.2931,2.2931:1.0,0.0,0.0
+chr1	5032870	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5032919;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.361478:20,26:20-22,21-26:9,14,0,16:19,2|20,7:4,1|6,2|8,1|11,1|12,1|14,1|15,1|16,1|17,3|21,1|23,2|26,1:304.689:366.612,131.36:0.352008,1.57945:6.5147e-08,1.0,5.81691e-23	0/0:37:0.652812:25,25:23-28,23-28:5,4,0,25:25,5:4,1|6,2|8,1|9,1|10,1|11,2|12,2|13,1|14,1|16,1|17,2|19,1|20,1|21,4|22,2|24,1|25,1:258.187:326.675,113.385:1.7121,1.7121:2.82121e-14,0.0563919,0.943694
+chr1	5034803	.	ACCCACCCACCC	.	.	.	END=5034814;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994095:3,3:3-3,3-3:11,14,0,0:3,11:NULL:173.794:366.612,131.36:0.0,0.0:1.24098e-32,0.00394774,0.996065	0/0:23:0.920083:3,3:3-3,3-3:7,16,0,0:3,7:NULL:173.165:326.675,113.385:0.19802,0.19802:5.54696e-21,0.0536464,0.946438
+chr1	5042658	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=5042677;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.149815:5,5:1-5,1-5:2,12,0,0:5,2:NULL:118.069:366.612,131.36:1.10262,1.10262:4.18241e-07,0.608055,0.392004	0/0:31:0.999979:5,5:5-5,5-5:19,12,0,0:5,19:NULL:191.35:326.675,113.385:0.0,0.0:0.0,2.86153e-05,0.999972
+chr1	5043950	.	GTTTGTTTGTTTGTTT	.	.	.	END=5043965;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:4,4:4-4,4-4:20,7,0,0:4,20:NULL:141.455:366.612,131.36:0.0,0.0:0.0,8.42021e-06,0.999994	0/0:45:1.00001:4,4:3-4,3-4:22,19,0,3:4,22:2,1|3,2:284.906:326.675,113.385:0.21692,0.21692:0.0,1.11147e-06,1.0
+chr1	5046122	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5046183;RU=ct;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0180503:26,26:26-28,26-28:0,5,0,0:NULL:NULL:44.9841:366.612,131.36:1.02378,1.02378:0.807671,0.182256,0.0101442	0/0:22:0.029794:31,31:28-34,28-34:0,11,0,9:NULL:7,1|10,1|12,1|15,2|20,2|25,1|31,1:172.568:326.675,113.385:1.12192,1.12192:1.72614e-08,0.478179,0.521908
+chr1	5046685	.	GTGGTGGTGGTG	GTGGTGGTGGTGGTG	.	.	END=5046696;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:0.830985:4,5:4-4,4-5:16,40,0,0:4,13|5,3:NULL:431.746:366.612,131.36:0.0,0.489073:2.65866e-29,4.68503e-05,0.999956	0/0:63:1.0:4,4:4-4,4-4:30,32,0,0:4,30:NULL:418.869:326.675,113.385:0.0990099,0.0990099:0.0,1.7048e-08,1.0
+chr1	5047709	.	TATATATATATATA	.	.	.	END=5047722;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997365:7,7:7-7,7-7:12,12,0,0:7,12:NULL:161.03:366.612,131.36:0.0,0.0:7.77904e-19,0.00182557,0.998178	0/0:15:0.984738:7,7:7-9,7-9:10,4,0,0:7,10:NULL:74.9247:326.675,113.385:0.922441,0.922441:4.13136e-16,0.0068031,0.993212
+chr1	5055484	.	TGCTGCTGCTGC	.	.	.	END=5055495;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999749:4,4:4-4,4-4:15,8,0,0:4,15:NULL:135.046:366.612,131.36:0.0,0.0:1.3e-44,0.00018649,0.999818	0/0:29:0.999993:4,4:4-4,4-4:19,10,0,0:4,19:NULL:162.768:326.675,113.385:0.0,0.0:0.0,1.46827e-05,0.999986
+chr1	5064770	.	GGCTGGCTGGCT	.	.	.	END=5064781;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.997253:3,3:3-3,3-3:11,9,0,3:3,11:2,2|3,1:146.383:366.612,131.36:0.0,0.0:2.5e-44,0.000676736,0.999325	0/0:31:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:194.449:326.675,113.385:0.0,0.0:0.0,4.37869e-05,0.999957
+chr1	5066467	.	TTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCT	TTTCCTTTTCCT	.	.	END=5066502;RU=tttcct;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0731375:2,2:1-2,1-2:0,13,0,0:NULL:NULL:123.218:366.612,131.36:0.486863,0.486863:0.646631,0.326493,0.0269461	0/0:46:1.0:6,6:6-6,6-6:24,16,0,6:6,24:2,1|3,1|4,2|5,2:288.471:326.675,113.385:0.0,0.0:0.0,3.17017e-07,1.0
+chr1	5068662	.	CTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5068679;RU=ct;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.370893:17,18:15-19,15-19:2,17,0,2:17,2:17,1|18,1:185.617:366.612,131.36:1.48337,1.16983:0.0,0.0,1.0	0/0:18:0.94179:9,9:9-9,9-9:7,9,0,2:9,7:7,1|8,1:124.687:326.675,113.385:0.0,0.0:1.14451e-16,0.0254612,0.974589
+chr1	5071017	.	ATTTATTTATTT	.	.	.	END=5071028;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.192677:3,3:1-3,1-3:2,17,0,0:3,2:NULL:160.902:366.612,131.36:0.877453,0.877453:4.0823e-06,0.603197,0.396863	0/0:27:0.999334:3,3:3-3,3-3:14,13,0,0:3,14:NULL:171.023:326.675,113.385:0.0,0.0:1.43838e-40,0.000438231,0.999567
+chr1	5073289	.	CTTCCTTCCTTC	CTTCCTTC	.	.	END=5073300;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0309734:2,2:1-5,1-5:0,11,0,0:NULL:NULL:99.0037:366.612,131.36:0.808615,0.808615:0.0839852,0.432101,0.484103	0/0:27:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:146.637:326.675,113.385:0.0,0.0:0.0,2.01791e-05,0.99998
+chr1	5073332	.	CCCTCTCCCTCTCCCTCTCCCTCT	CCCTCT	.	.	END=5073355;RU=ccctct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0763815:1,1:1-2,1-2:0,14,0,0:NULL:NULL:124.041:366.612,131.36:0.44763,0.44763:0.389388,0.484308,0.126391	1/1:6:0.0145428:1,1:1-1,1-1:0,6,0,0:NULL:NULL:50.552:326.675,113.385:0.0,0.0:0.106345,0.511468,0.38237
+chr1	5074855	.	AAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=5074870;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.991707:6,6:6-6,6-6:11,7,0,0:6,11:NULL:109.741:366.612,131.36:0.0,0.0:0.0,0.00239985,0.997608	0/0:24:0.999781:4,4:4-4,4-4:15,6,0,3:4,15:3,3:138.025:326.675,113.385:0.0,0.0:0.0,8.98934e-05,0.999911
+chr1	5075461	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5075502;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.301404:23,23:19-23,19-23:3,15,0,2:23,3:4,1|11,1:166.597:366.612,131.36:1.03975,1.03975:1.26872e-07,0.221528,0.778513	0/2:36:0.334589:21,42:21-21,21-42:16,14,0,6:20,4|21,12:8,1|13,1|14,1|19,1|20,1|42,1:275.005:326.675,113.385:0.0,10.4015:2.64187e-15,0.000464744,0.999538
+chr1	5076742	.	AAACAAAACAAAACA	.	.	.	END=5076756;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.999445:3,3:3-3,3-3:14,1,0,0:3,14:NULL:64.0851:366.612,131.36:0.0,0.0:1e-45,0.000246601,0.999757	0/0:27:0.976225:3,3:3-3,3-3:9,18,0,0:3,9:NULL:209.489:326.675,113.385:0.0,0.0:4.81057e-29,0.0183779,0.981659
+chr1	5083412	.	GGGCCGGGCCGGGCCGGGCC	.	.	.	END=5083431;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,16,0,6:4,28:2,2|3,4:304.674:366.612,131.36:0.0,0.0:0.0,1.98004e-08,1.0	0/0:33:0.998278:4,4:4-4,4-4:13,18,0,2:4,13:3,2:232.973:326.675,113.385:0.0,0.0:3.013e-42,0.0013592,0.998647
+chr1	5084805	.	ATGTATGTATGT	.	.	.	END=5084816;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:22,20,0,4:3,22:2,4:302.177:366.612,131.36:0.0,0.0:0.0,4.10807e-07,1.0	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.527:326.675,113.385:0.0,0.0:0.0,2.36315e-06,1.0
+chr1	5087801	.	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	.	.	END=5087900;RU=ctttc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.423483:17,17:14-17,14-17:3,25,0,17:17,3:3,1|5,2|6,1|7,3|9,2|10,2|11,1|12,1|14,2|15,1|16,1:371.198:366.612,131.36:0.712734,0.712734:0.949726,0.0503559,3.15541e-13	0/0:44:0.224341:20,20:18-20,18-20:2,15,0,27:20,2:3,3|4,2|5,2|6,1|7,1|8,1|9,2|10,3|11,1|12,5|16,1|17,2|18,3:341.413:326.675,113.385:1.01397,1.01397:6.01713e-05,0.632259,0.367732
+chr1	5087905	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	END=5087943;RU=tgt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.8976:12,12:11-12,11-12:7,13,0,0:12,7:NULL:150.871:366.612,131.36:0.419363,0.419363:0.970468,0.0295872,7.15236e-11	0/0:35:0.999969:13,13:13-13,13-13:18,5,0,11:13,18:4,2|5,1|6,3|8,1|9,1|10,2|12,1:207.319:326.675,113.385:0.0,0.0:2.99767e-37,2.41469e-05,0.999978
+chr1	5089647	.	TTTATTTTATTTTAT	.	.	.	END=5089661;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.973746:3,3:3-3,3-3:9,16,0,0:3,9:NULL:185.953:366.612,131.36:0.19802,0.19802:6.29408e-30,0.0208076,0.979234	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:169.797:326.675,113.385:0.0,0.0:0.0,3.75043e-06,1.0
+chr1	5093894	.	ATTTTATTTTATTTT	.	.	.	END=5093908;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999851:3,3:3-3,3-3:16,7,0,0:3,16:NULL:127.757:366.612,131.36:0.0,0.0:9.1e-44,8.21706e-05,0.999918	0/0:33:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:210.294:326.675,113.385:0.0,0.0:0.0,2.23212e-05,0.999979
+chr1	5094712	.	ATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT	.	.	END=5094743;RU=at;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.17472:19,19:19-22,19-22:2,13,0,0:19,2:NULL:127.165:366.612,131.36:1.09834,1.09834:0.0,0.0,1.0	0/0:24:0.957031:16,16:13-16,13-16:10,12,0,0:16,10:NULL:155.669:326.675,113.385:1.06729,1.06729:4.33584e-11,0.0290692,0.970985
+chr1	5094744	.	ACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=5094759;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:29:0.998935:8,13:8-12,11-13:9,16,0,3:8,3|11,2|13,4:7,1|8,1|12,1:217.207:366.612,131.36:1.52861,0.57834:9.98027e-36,3.49991e-05,0.999964	0/0:30:0.998945:8,8:8-8,8-8:14,12,0,3:8,14:6,2|7,1:191.816:326.675,113.385:0.139319,0.139319:1.03682e-19,0.000471918,0.99953
+chr1	5094790	.	ACACACACACACAC	ACACACACACACACAC	.	.	END=5094803;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999827:8,8:8-9,8-9:17,13,0,0:8,17:NULL:188.976:366.612,131.36:0.21692,0.21692:0.0,8.64003e-05,0.999917	0/0:29:0.999462:7,7:7-7,7-7:14,11,0,4:7,14:6,1|7,3:189.759:326.675,113.385:0.0,0.0:0.0,4.86949e-05,0.999955
+chr1	5097446	.	TTTATTTATTTA	.	.	.	END=5097457;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999863:3,3:3-3,3-3:15,27,0,2:3,15:2,2:320.643:366.612,131.36:0.0,0.0:0.0,9.35685e-05,0.99991	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:155.907:326.675,113.385:0.0,0.0:0.0,4.98331e-06,0.999995
+chr1	5102138	.	ATTTTATTTTATTTTATTTT	.	.	.	END=5102157;RU=atttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999837:4,4:4-4,4-4:16,11,0,0:4,16:NULL:162.302:366.612,131.36:0.0,0.0:0.0,0.000129928,0.999872	0/0:25:0.995369:4,4:4-4,4-4:11,12,0,2:4,11:3,2:170.556:326.675,113.385:0.0,0.0:2.25603e-36,0.00291734,0.997088
+chr1	5106170	.	ATTTATTTATTT	.	.	.	END=5106181;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.993565:3,3:3-3,3-3:11,8,0,0:3,11:NULL:117.455:366.612,131.36:0.0,0.0:1.93051e-36,0.00365293,0.996354	0/0:34:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:207.406:326.675,113.385:0.0,0.0:0.0,1.2672e-05,0.999987
+chr1	5119029	.	TGTATGTATGTA	TGTATGTATGTATGTA	.	.	END=5119040;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0766832:4,4:1-4,1-4:0,20,0,2:NULL:2,2:194.997:366.612,131.36:0.648798,0.648798:0.129674,0.484023,0.38649	0/0:38:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:232.028:326.675,113.385:0.0,0.0:0.0,3.10227e-06,1.0
+chr1	5120108	.	TTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=5120132;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.999993:6,6:6-6,6-6:19,2,0,0:6,19:NULL:97.5754:366.612,131.36:0.0,0.0:0.0,8.88581e-06,0.999994	0/0:29:0.999999:5,5:5-5,5-5:18,8,0,3:5,18:4,3:172.739:326.675,113.385:0.0,0.0:0.0,7.62036e-06,0.999994
+chr1	5122238	.	ATTTTATTTTATTTT	.	.	.	END=5122252;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999732:3,3:3-3,3-3:15,14,0,0:3,15:NULL:187.866:366.612,131.36:0.0,0.0:0.0,0.000213579,0.999788	0/0:31:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:182.449:326.675,113.385:0.0,0.0:0.0,7.64385e-06,0.999994
+chr1	5124506	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT	.	.	END=5124523;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.611604:11,11:10-11,10-11:15,17,0,3:10,3|11,12:5,1|7,1|11,1:250.286:366.612,131.36:0.465241,0.465241:0.0,0.000149354,0.99985	0/0:43:0.999951:9,9:9-9,9-9:17,17,0,8:9,17:5,2|6,1|7,1|8,4:292.165:326.675,113.385:0.139319,0.139319:5.24719e-27,2.88864e-05,0.999972
+chr1	5130293	.	TTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=5130313;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.978104:8,8:8-8,8-8:9,14,0,5:8,9:3,1|5,1|6,1|7,2:202.051:366.612,131.36:0.0,0.0:1.93e-43,0.00381364,0.996195	0/0:32:0.99936:7,7:6-7,6-7:14,11,0,6:7,14:3,2|4,2|5,2:199.703:326.675,113.385:0.195027,0.195027:4.93393e-32,0.000344328,0.999659
+chr1	5131927	.	TTTATTTATTTATTTATTTATTTA	TTTATTTATTTATTTATTTATTTATTTA	.	.	END=5131950;RU=ttta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999788:7,7:7-7,7-7:15,14,0,6:7,15:3,2|5,2|6,2:231.075:366.612,131.36:0.0,0.0:0.0,4.31738e-05,0.999957	0/0:36:1.0:6,6:6-6,6-6:23,8,0,4:6,23:3,3|5,1:195.315:326.675,113.385:0.0,0.0:0.0,5.79974e-07,1.0
+chr1	5136692	.	TAATTAATTAATTAAT	.	.	.	END=5136707;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.998591:4,4:4-4,4-4:14,24,0,0:4,14:NULL:285.967:366.612,131.36:0.0,0.0:1.12765e-38,0.0011807,0.998823	0/0:39:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:241.36:326.675,113.385:0.0,0.0:0.0,4.79915e-06,0.999995
+chr1	5136778	.	TTTGTTTGTTTGTTTG	.	.	.	END=5136793;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.893922:4,4:4-4,4-4:6,20,0,4:4,6:2,1|3,3:240.676:366.612,131.36:0.0990099,0.0990099:8.65602e-21,0.0682427,0.931854	0/0:44:1.0:4,4:3-4,3-4:23,16,0,4:4,23:3,4:265.691:326.675,113.385:0.169767,0.169767:0.0,3.97615e-07,1.0
+chr1	5137285	.	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAA	.	.	.	END=5137324;RU=aacaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.984495:8,8:8-8,8-8:11,22,0,5:8,11:3,1|5,3|6,1:288.126:366.612,131.36:0.29703,0.29703:2.79445e-37,0.0136302,0.9864	0/0:49:0.999985:8,8:7-8,7-8:18,19,0,11:8,18:3,2|4,1|5,3|6,2|7,3:330.796:326.675,113.385:0.311527,0.311527:0.0,2.48916e-05,0.999978
+chr1	5138729	.	AAATAAATAAAT	.	.	.	END=5138740;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999729:3,3:3-3,3-3:15,14,0,3:3,15:2,3:203.069:366.612,131.36:0.0,0.0:0.0,0.00013237,0.999871	0/0:26:0.999945:3,3:3-3,3-3:17,7,0,2:3,17:2,2:140.376:326.675,113.385:0.0,0.0:0.0,2.30953e-05,0.999979
+chr1	5139656	.	CACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5139691;RU=ca;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:27:0.833584:22,23:21-23,21-23:5,7,0,14:22,3|23,2:5,2|6,1|7,2|8,1|12,1|15,1|17,2|19,2|20,1|23,1:203.602:366.612,131.36:0.505823,0.613702:0.0,0.0,1.0	0/0:33:0.408681:18,18:17-19,17-19:15,9,0,8:17,2|18,10|19,3:8,1|9,1|10,1|12,3|14,1|17,1:223.782:326.675,113.385:0.646679,0.646679:6.46431e-13,0.00452802,0.995484
+chr1	5144394	.	TAAATAAATAAA	.	.	.	END=5144405;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99998:3,3:3-3,3-3:19,8,0,0:3,19:NULL:149.522:366.612,131.36:0.0,0.0:0.0,1.52514e-05,0.999986	0/0:36:1.0:3,3:3-3,3-3:25,9,0,2:3,25:2,2:191.591:326.675,113.385:0.0,0.0:0.0,1.22971e-07,1.0
+chr1	5144427	.	AAAAGAAAAGAAAAG	.	.	.	END=5144441;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.113:366.612,131.36:0.0,0.0:0.0,1.0044e-05,0.999993	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:164.921:326.675,113.385:0.0,0.0:0.0,7.35247e-07,1.0
+chr1	5146387	.	CTCTCTCTCTCTCT	.	.	.	END=5146400;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.919069:7,7:7-7,7-7:7,13,0,0:7,7:NULL:143.578:366.612,131.36:0.0,0.0:5.6896e-14,0.0473101,0.952768	0/0:21:0.966795:7,7:7-7,7-7:9,12,0,0:7,9:NULL:144.35:326.675,113.385:0.29703,0.29703:2.06253e-17,0.0224026,0.977639
+chr1	5151445	.	TTGTTGTTGTTG	.	.	.	END=5151456;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:25,16,0,0:4,25:NULL:244.901:366.612,131.36:0.0,0.0:0.0,3.24408e-07,1.0	0/0:37:0.999896:4,4:4-4,4-4:16,17,0,4:4,16:3,4:250.819:326.675,113.385:0.0,0.0:0.0,7.1918e-05,0.999932
+chr1	5152296	.	AAGTCAAGTCAAGTC	.	.	.	END=5152310;RU=aagtc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999903:3,3:3-3,3-3:17,21,0,0:3,17:NULL:265.343:366.612,131.36:0.0,0.0:0.0,9.4407e-05,0.999909	0/0:34:1.0:3,3:3-3,3-3:25,7,0,2:3,25:2,2:180.137:326.675,113.385:0.0,0.0:0.0,1.04653e-07,1.0
+chr1	5155085	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=5155102;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999279:6,6:5-6,5-6:26,17,0,3:5,2|6,24:5,3:300.68:366.612,131.36:0.298675,0.298675:0.0,0.000723085,0.999279	0/1:28:0.300237:6,7:6-6,6-8:15,10,0,3:6,15:5,2|7,1:186.515:326.675,113.385:0.0,0.859278:0.0,3.67236e-08,1.0
+chr1	5162575	.	TCCCCCTCCCCCTCCCCC	.	.	.	END=5162592;RU=tccccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:237.625:366.612,131.36:0.0,0.0:0.0,7.16308e-06,0.999994	0/0:25:0.99991:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.329:326.675,113.385:0.0,0.0:0.0,5.99108e-05,0.999941
+chr1	5163622	.	TCTCTCTCTCTCTCTC	TCTCTCTCTCTCTC	.	.	END=5163637;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.901722:7,7:5-7,5-7:21,18,0,0:5,2|6,2|7,17:NULL:276.157:366.612,131.36:0.847446,0.847446:1.0,2.2429e-06,1.38999e-28	0/0:35:0.988585:8,8:8-9,8-9:23,10,0,2:8,21|9,2:4,1|7,1:212.43:326.675,113.385:0.425627,0.425627:0.0,8.37333e-07,1.0
+chr1	5164581	.	TGTTTTGTTTTGTTT	.	.	.	END=5164595;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.995517:3,3:3-3,3-3:12,15,0,0:3,12:NULL:184.023:366.612,131.36:0.0,0.0:7.00488e-37,0.0035241,0.996483	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:213.3:326.675,113.385:0.0,0.0:0.0,7.12203e-08,1.0
+chr1	5170810	.	CCACCACCACCA	.	.	.	END=5170821;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:226.062:366.612,131.36:0.0,0.0:0.0,2.6812e-07,1.0	0/0:49:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:326.038:326.675,113.385:0.0,0.0:0.0,7.19001e-07,1.0
+chr1	5173050	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=5173067;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999862:6,6:6-6,6-6:16,15,0,5:6,16:3,1|4,2|5,2:240.565:366.612,131.36:0.0,0.0:0.0,6.14837e-05,0.999941	0/0:26:0.999982:6,6:6-6,6-6:18,8,0,0:6,18:NULL:144.716:326.675,113.385:0.0,0.0:0.0,2.45148e-05,0.999978
+chr1	5173130	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=5173165;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.986903:11,11:4-11,4-11:10,12,0,7:11,10:4,1|5,1|6,1|7,2|10,2:217.158:366.612,131.36:3.47918,3.47918:4.22e-43,0.00497608,0.995039	0/0:22:0.995345:9,9:8-9,8-9:11,7,0,3:9,11:4,1|8,2:133.298:326.675,113.385:0.298675,0.298675:2.13587e-23,0.0021916,0.997814
+chr1	5181851	.	TAAATAAATAAA	.	.	.	END=5181862;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.998314:3,3:3-4,3-4:13,21,0,0:3,13:NULL:237.575:366.612,131.36:0.442564,0.442564:7.37232e-40,0.00129224,0.99871	0/0:22:0.999774:3,3:3-3,3-3:15,5,0,2:3,15:2,2:116.435:326.675,113.385:0.0,0.0:0.0,8.72359e-05,0.999917
+chr1	5195638	.	GGGTGGGTGGGT	.	.	.	END=5195649;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.976028:3,3:3-3,3-3:9,19,0,0:3,9:NULL:204.429:366.612,131.36:0.0990099,0.0990099:2.21323e-26,0.0157165,0.984315	0/0:28:0.988988:3,3:3-3,3-3:10,18,0,0:3,10:NULL:206.144:326.675,113.385:0.0,0.0:1.91723e-29,0.00707587,0.992941
+chr1	5199281	.	AACAACAACAACAACAACAAC	AAC	.	.	END=5199301;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:44:1.00001:7,7:7-7,7-7:22,18,0,4:7,22:3,1|4,1|5,1|6,1:283.57:326.675,113.385:0.0,0.0:0.0,1.18639e-06,1.0
+chr1	5199415	.	TCAATTCAATTCAAT	TCAAT	.	.	END=5199429;RU=tcaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:173.551:326.675,113.385:0.0,0.0:0.0,7.79094e-07,1.0
+chr1	5203454	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5203499;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:19:0.616492:27,27:27-28,27-28:5,10,0,3:27,5:12,1|16,1|20,1:142.65:366.612,131.36:0.475866,0.475866:0.0,0.0,1.0	0/1:53:0.990147:23,24:8-23,8-24:16,16,0,20:21,2|22,3|23,9|24,2:4,3|6,3|7,1|8,2|9,2|11,1|13,1|15,2|16,1|19,1|20,2|24,1:398.603:326.675,113.385:6.28355,6.4573:3.53341e-14,0.00125951,0.998746
+chr1	5204415	.	AAAACAAAACAAAAC	.	.	.	END=5204429;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,22,0,0:3,24:NULL:289.691:366.612,131.36:0.0,0.0:0.0,6.84593e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:207.813:326.675,113.385:0.0,0.0:0.0,1.32214e-06,1.0
+chr1	5206150	.	TATTATTATTAT	.	.	.	END=5206161;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:24,19,0,2:4,24:3,2:280.676:366.612,131.36:0.0,0.0:0.0,4.49774e-07,1.0	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:179.209:326.675,113.385:0.0,0.0:0.0,5.83942e-06,0.999995
+chr1	5209488	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=5209507;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:5,5:5-5,5-5:24,25,0,3:5,24:4,1|5,2:342.299:366.612,131.36:0.0,0.0:0.0,2.93501e-07,1.0	0/0:50:1.0:5,5:5-5,5-5:29,17,0,4:5,29:2,2|3,1|4,1:305.847:326.675,113.385:0.0,0.0:0.0,1.4108e-08,1.0
+chr1	5212542	.	AATAAATAAATA	.	.	.	END=5212553;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:29,21,0,0:3,29:NULL:302.188:366.612,131.36:0.0,0.0:0.0,6.61937e-09,1.0	0/0:30:0.999534:3,3:3-3,3-3:14,16,0,0:3,14:NULL:200.165:326.675,113.385:0.0,0.0:5e-44,0.000297945,0.999705
+chr1	5214463	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5214514;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.179791:38,38:22-39,22-39:2,16,0,22:38,2:7,2|8,1|10,1|12,1|13,1|19,1|20,1|21,1|22,3|24,2|25,1|27,1|28,1|29,1|30,1|33,1|35,1|37,1:332.766:366.612,131.36:8.03867,8.03867:0.0,0.00525894,0.994754	0/0:55:0.816593:26,26:22-26,22-26:8,24,0,22:25,2|26,6:5,2|6,1|8,1|10,2|12,2|14,2|15,1|16,1|17,2|20,1|21,3|22,1|23,1|24,1|26,1:439.895:326.675,113.385:1.52231,1.52231:7.61869e-14,0.109333,0.890764
+chr1	5214858	.	ACAAACAAACAAACAAACAAACAA	ACAAACAAACAAACAAACAAACAAACAA	.	.	END=5214881;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999981:7,7:7-7,7-7:18,16,0,6:7,18:4,1|5,1|6,4:263.817:366.612,131.36:0.0,0.0:0.0,1.96046e-06,1.0	0/0:44:1.0:6,6:6-6,6-6:32,6,0,6:6,32:3,1|4,2|5,3:227.028:326.675,113.385:0.0,0.0:0.0,7.81639e-10,1.0
+chr1	5215016	.	AAACAAACAAACAAAC	.	.	.	END=5215031;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999931:4,4:4-4,4-4:17,22,0,3:4,17:3,3:296.386:366.612,131.36:0.0,0.0:0.0,6.34682e-05,0.99994	0/0:34:0.999896:4,4:4-4,4-4:16,14,0,4:4,16:3,4:222.896:326.675,113.385:0.0,0.0:0.0,5.2001e-05,0.999949
+chr1	5215414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=5215441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.0337407:6,6:6-8,6-8:0,4,0,0:NULL:NULL:33.8497:366.612,131.36:0.950082,0.950082:0.12587,0.46186,0.412459	0/0:36:0.999947:7,7:6-7,6-7:17,11,0,7:7,17:3,1|5,2|6,4:222.254:326.675,113.385:0.35561,0.35561:0.0,2.25514e-05,0.999979
+chr1	5215633	.	GTTTTTTTGTTTTTTTGTTTTTTT	GTTTTTTT	.	.	END=5215656;RU=gttttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0699749:1,1:1-1,1-1:0,8,0,0:NULL:NULL:71.2298:366.612,131.36:0.0,0.0:0.161111,0.542501,0.296497	0/0:19:0.929627:3,3:3-3,3-3:7,12,0,0:3,7:NULL:137.474:326.675,113.385:0.0,0.0:4.70423e-20,0.051824,0.948258
+chr1	5222650	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5222685;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:37:0.999975:14,18:14-15,15-25:15,18,0,3:14,8|15,2|18,5:8,1|10,1|13,1:265.085:366.612,131.36:1.09602,1.47222:1.35483e-06,1.0,1.7173e-11	0/0:31:0.591313:18,18:7-20,7-20:12,7,0,8:17,3|18,9:5,1|7,2|9,1|11,1|12,1|13,2:186.063:326.675,113.385:3.56991,3.56991:4.53689e-11,0.404719,0.595353
+chr1	5222686	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5222719;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0157724:29,29:15-32,15-32:0,16,0,9:NULL:8,1|9,2|11,1|12,2|15,1|25,1|28,1:217.563:366.612,131.36:7.10125,7.10125:1.02035e-15,0.221213,0.778826	0/0:26:0.988323:17,17:12-17,12-17:10,9,0,6:17,10:6,3|12,1|16,1|17,1:168.324:326.675,113.385:2.15787,2.15787:1.15349e-24,0.00401421,0.995997
+chr1	5223713	.	TTTGTTTGTTTG	.	.	.	END=5223724;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:25,19,0,2:3,25:2,2:291.821:366.612,131.36:0.0,0.0:0.0,7.77745e-08,1.0	0/0:34:0.999719:3,3:3-3,3-3:15,19,0,0:3,15:NULL:235.265:326.675,113.385:0.0,0.0:6e-45,0.000233093,0.999767
+chr1	5224486	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	END=5224521;RU=ttcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.737032:15,15:4-15,4-15:6,15,0,8:15,6:2,1|5,1|8,1|10,1|13,1|14,3:230.197:366.612,131.36:3.75682,3.75682:0.0,0.0851395,0.914956	0/0:25:0.999249:9,9:8-9,8-9:14,10,0,0:9,14:NULL:153.745:326.675,113.385:0.270063,0.270063:5.5024e-40,0.000564618,0.999438
+chr1	5225503	.	TTTATTTATTTATTTATTTA	.	.	.	END=5225522;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.00001:5,5:5-5,5-5:22,25,0,5:5,22:2,2|3,2|4,1:355.417:366.612,131.36:0.0,0.0:0.0,2.06382e-06,1.0	0/0:41:0.999991:5,5:5-5,5-5:18,15,0,8:5,18:2,1|3,3|4,4:267.129:326.675,113.385:0.0,0.0:0.0,1.16671e-05,0.999987
+chr1	5225865	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5225896;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:80:0.347947:22,29:21-22,21-29:15,34,0,28:21,6|22,9:5,2|6,1|8,1|9,1|10,1|11,1|12,1|13,2|14,4|15,1|16,3|17,3|18,1|19,1|21,4|29,1:621.824:366.612,131.36:0.236383,3.71225:0.0,0.0,1.0	0/0:31:0.378564:16,16:13-16,13-16:8,12,0,9:15,3|16,5:5,1|7,1|8,1|9,1|11,1|12,3|16,1:226.415:326.675,113.385:0.967363,0.967363:9.83265e-13,0.604702,0.395359
+chr1	5228543	.	TTTATTTATTTA	.	.	.	END=5228554;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:28,12,0,4:3,28:2,3|3,1:251.392:366.612,131.36:0.0,0.0:0.0,7.3749e-09,1.0	0/0:32:0.999984:3,3:3-3,3-3:18,14,0,0:3,18:NULL:201.611:326.675,113.385:0.0,0.0:0.0,2.33616e-05,0.999979
+chr1	5232603	.	TAATAATAATAA	.	.	.	END=5232614;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:4,4:4-4,4-4:23,9,0,0:4,23:NULL:168.543:366.612,131.36:0.0,0.0:0.0,1.06949e-06,1.0	0/0:24:1.0:4,4:4-4,4-4:20,4,0,0:4,20:NULL:116.086:326.675,113.385:0.0,0.0:0.0,5.85088e-06,0.999995
+chr1	5237129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5237166;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.813959:19,19:18-19,18-19:7,10,0,2:19,7:7,1|11,1:145.291:366.612,131.36:0.374147,0.374147:2.06632e-09,0.114796,0.885306	0/0:34:0.996205:19,19:10-19,10-19:17,7,0,8:18,2|19,15:10,1|11,1|14,1|15,1|16,1|17,2|18,1:205.591:326.675,113.385:3.76193,3.76193:5.78756e-18,0.00365141,0.99636
+chr1	5237829	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT,TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5237896;RU=ttct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0416806:19,19:14-21,14-21:0,8,0,8:NULL:4,1|5,1|6,2|12,1|14,1|17,1|18,1:130.054:366.612,131.36:1.80051,1.80051:3.71072e-16,0.376297,0.623757	1/1:37:0.762862:18,18:17-18,17-18:5,14,0,17:18,5:5,2|6,2|8,3|9,1|10,2|11,1|12,1|13,1|15,2|16,1|17,1:276.605:326.675,113.385:0.494455,0.494455:4.1147e-18,0.076631,0.923462
+chr1	5248663	.	ACCACCACCACC	.	.	.	END=5248674;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:4,4:4-4,4-4:40,16,0,0:4,40:NULL:299.265:366.612,131.36:0.0,0.0:0.0,8.09204e-12,1.0	0/0:54:1.0:4,4:4-4,4-4:32,18,0,4:4,32:3,4:326.504:326.675,113.385:0.0,0.0:0.0,7.37035e-10,1.0
+chr1	5256153	.	GAGCAAGAGCAAGAGCAA	.	.	.	END=5256170;RU=gagcaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999993:3,3:3-3,3-3:19,8,0,0:3,19:NULL:143.436:366.612,131.36:0.0,0.0:2.84919e-36,1.28151e-05,0.999987	0/0:48:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:269.734:326.675,113.385:0.0,0.0:0.0,9.40678e-10,1.0
+chr1	5258418	.	CACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5258457;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:64:0.49556:22,24:22-22,8-28:24,16,0,20:21,6|22,18:5,1|10,1|11,1|13,1|14,1|15,1|16,5|17,3|18,1|19,1|20,2|22,1|24,1:437.329:366.612,131.36:0.0,6.46634:0.0,4.22087e-09,1.0	0/0:101:1.0:20,20:20-20,20-20:47,24,0,30:19,7|20,38|21,2:4,1|5,2|6,2|7,1|8,1|9,3|10,2|12,1|14,2|15,2|16,3|17,2|18,1|19,5|20,2:681.747:326.675,113.385:0.0990099,0.0990099:0.0,9.9887e-08,1.0
+chr1	5258712	.	GTTTGTTTGTTTGTTTGTTT	.	.	.	END=5258731;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:5,5:2-5,2-5:32,19,0,7:5,32:2,1|3,2|4,4:353.064:366.612,131.36:0.5093,0.5093:0.0,8.45447e-10,1.0	0/0:51:0.999986:5,5:4-5,4-5:31,17,0,3:4,2|5,29:3,1|4,2:311.605:326.675,113.385:0.298675,0.298675:0.0,1.61664e-05,0.999986
+chr1	5259167	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=5259184;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997238:9,9:8-9,8-9:22,12,0,0:8,3|9,19:NULL:205.731:366.612,131.36:0.253975,0.253975:1.4656e-32,0.00277942,0.99723	0/0:36:0.992784:9,9:8-9,8-9:21,12,0,3:8,3|9,18:5,1|7,1|8,1:222.927:326.675,113.385:0.298675,0.298675:1.90519e-30,0.00723947,0.992776
+chr1	5260536	.	AGAGAGAGAGAG	.	.	.	END=5260547;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:24,15,0,3:6,24:4,1|5,2:257.581:366.612,131.36:0.0,0.0:0.0,3.27837e-07,1.0	0/0:41:1.0:6,6:6-6,6-6:27,11,0,2:6,27:4,1|5,1:221.878:326.675,113.385:0.139319,0.139319:0.0,3.43838e-08,1.0
+chr1	5261841	.	ACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCAC	.	.	.	END=5261894;RU=accctgtgaggggagcac;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.989161:3,3:3-3,3-3:12,25,0,3:3,12:2,3:307.882:366.612,131.36:0.19802,0.19802:1.21564e-13,0.0108002,0.989224	0/0:26:0.457035:3,3:1-3,1-3:8,18,0,0:3,8:NULL:212.032:326.675,113.385:0.982146,0.982146:1.46782e-08,0.542026,0.458084
+chr1	5274498	.	CACACACACACACACACACACACACACACA	.	.	.	END=5274527;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.827913:15,15:12-16,12-16:14,11,0,4:14,3|15,11:5,1|10,1|13,2:198.033:366.612,131.36:1.07834,1.07834:8.4421e-11,0.171242,0.828827	0/0:49:0.999387:15,15:14-15,14-15:20,18,0,9:14,2|15,18:4,2|5,2|10,1|11,1|14,3:327.507:326.675,113.385:0.290354,0.290354:1.052e-19,0.000612737,0.999392
+chr1	5275399	.	CCAACCAACCAACCAA	.	.	.	END=5275414;RU=ccaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.992288:4,4:4-4,4-4:10,26,0,2:4,10:3,2:288.018:366.612,131.36:0.29703,0.29703:1.16967e-32,0.00604591,0.99397	0/0:24:0.999116:4,4:3-4,3-4:14,9,0,0:4,14:NULL:137.796:326.675,113.385:0.412766,0.412766:4e-45,0.000609573,0.999393
+chr1	5277383	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5277428;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.898518:12,21:12-21,20-21:11,10,0,7:12,2|20,4|21,5:5,1|7,1|9,1|10,3|14,1:208.996:366.612,131.36:3.65753,0.35561:1.0,3.34413e-09,4.59526e-18	0/0:31:0.947523:23,23:22-23,22-23:11,11,0,8:22,2|23,9:5,1|7,1|8,1|16,2|17,3:221.047:326.675,113.385:0.335467,0.335467:4.2736e-11,0.0337459,0.966317
+chr1	5287020	.	CTTTCTTTCTTT	.	.	.	END=5287031;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999962:3,3:3-3,3-3:18,16,0,0:3,18:NULL:226.214:366.612,131.36:0.0,0.0:0.0,4.26436e-05,0.999957	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:182.96:326.675,113.385:0.0,0.0:0.0,2.75502e-06,1.0
+chr1	5287167	.	CACTCACTCACT	.	.	.	END=5287178;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.997619:3,3:3-3,3-3:13,17,0,0:3,13:NULL:209.212:366.612,131.36:0.0,0.0:2.217e-42,0.00140441,0.998602	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:222.996:326.675,113.385:0.0,0.0:0.0,9.17748e-07,1.0
+chr1	5292757	.	TATTTATTTATTTATT	.	.	.	END=5292772;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:4,4:4-4,4-4:24,28,0,5:4,24:3,5:381.227:366.612,131.36:0.0,0.0:0.0,2.152e-07,1.0	0/0:45:1.0:4,4:4-4,4-4:31,12,0,2:4,31:2,1|3,1:249.227:326.675,113.385:0.0,0.0:0.0,2.36608e-09,1.0
+chr1	5293618	.	ACCCACCCACCC	.	.	.	END=5293629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.286812:3,3:1-4,1-4:2,5,0,0:3,2:NULL:56.0438:366.612,131.36:0.4771,0.4771:6.95321e-07,0.320178,0.679833	0/0:33:0.997083:3,3:3-3,3-3:11,20,0,2:3,11:2,2:235.353:326.675,113.385:0.0,0.0:1.65754e-32,0.00180725,0.9982
+chr1	5296079	.	TCTCTCTCTCTC	TCTCTCTCTC	.	.	END=5296090;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.999768:5,6:5-6,6-6:23,7,0,0:5,6|6,17:NULL:167.987:366.612,131.36:0.323567,0.0:3.67971e-28,0.999766,0.000235612	0/0:41:1.0:6,6:4-6,4-6:24,16,0,0:6,24:NULL:243.658:326.675,113.385:0.339533,0.339533:0.0,1.01115e-06,1.0
+chr1	5297215	.	TTATTATTATTA	.	.	.	END=5297226;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:68:1.0:4,4:4-4,4-4:30,36,0,2:4,30:3,2:473.448:366.612,131.36:0.0,0.0:0.0,3.80989e-08,1.0	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:285.39:326.675,113.385:0.0,0.0:0.0,6.96663e-09,1.0
+chr1	5301831	.	AAAGAAAGAAAG	.	.	.	END=5301842;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,20,0,0:3,29:NULL:294.546:366.612,131.36:0.0,0.0:0.0,7.70578e-09,1.0	0/0:42:1.00001:3,3:3-3,3-3:22,20,0,0:3,22:NULL:269.307:326.675,113.385:0.0,0.0:0.0,2.30349e-06,1.0
+chr1	5303346	.	TTTGTTTGTTTGTTTG	.	.	.	END=5303361;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.997585:4,4:4-4,4-4:13,20,0,0:4,13:NULL:228.538:366.612,131.36:0.0,0.0:1e-42,0.00188801,0.998117	0/0:31:0.999824:4,4:4-4,4-4:15,10,0,6:4,15:3,6:189.096:326.675,113.385:0.0,0.0:0.0,7.15698e-05,0.999932
+chr1	5303465	.	TAGGTAGGTAGG	.	.	.	END=5303476;RU=tagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:179.066:366.612,131.36:0.0,0.0:0.0,4.32502e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:27,5,0,3:3,27:2,3:170.725:326.675,113.385:0.0,0.0:0.0,1.88107e-08,1.0
+chr1	5304109	.	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	.	.	END=5304158;RU=caaag;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.990926:11,11:11-11,11-11:10,24,0,9:11,10:4,2|5,1|7,1|8,3|9,1|10,1:325.961:366.612,131.36:0.0,0.0:4e-45,0.00453009,0.995484	0/0:34:0.999662:10,10:6-10,6-10:16,13,0,4:10,16:2,1|6,2|9,1:221.236:326.675,113.385:1.8278,1.8278:0.0,0.000306716,0.999697
+chr1	5305886	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5305925;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:54:0.338605:20,37:20-20,19-37:16,21,0,16:19,5|20,11:6,1|8,2|10,3|11,1|12,1|13,2|16,2|17,1|18,1|19,1|36,1:415.777:366.612,131.36:0.0,8.43581:1.53622e-12,0.00330418,0.996707	0/1:53:0.357551:20,24:20-20,10-24:17,18,0,14:19,6|20,11:6,1|7,3|8,2|9,2|13,1|14,1|17,1|18,1|20,1|24,1:379.134:326.675,113.385:0.139319,5.17495:3.42354e-19,0.00235956,0.997647
+chr1	5306965	.	ATCATCATCATC	.	.	.	END=5306976;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:29,9,0,0:4,29:NULL:194.503:366.612,131.36:0.0,0.0:0.0,1.60491e-08,1.0	0/0:50:1.0:4,4:4-4,4-4:29,16,0,5:4,29:3,5:297.402:326.675,113.385:0.0,0.0:0.0,8.0037e-09,1.0
+chr1	5312273	.	TCTCTCTCTCTCTCTC	.	.	.	END=5312288;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.987404:8,8:6-8,6-8:26,9,0,0:6,4|7,2|8,20:NULL:212.78:366.612,131.36:0.850448,0.850448:1.5683e-41,0.0126277,0.987401	0/0:31:0.99995:8,8:8-9,8-9:22,4,0,3:7,2|8,20:5,2|6,1:155.316:326.675,113.385:0.39604,0.39604:4.36e-43,6.0267e-05,0.999941
+chr1	5312289	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5312324;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:43:0.868327:17,18:17-17,17-20:13,14,0,15:16,2|17,9|18,2:5,2|9,1|11,2|12,2|15,4|16,4:320.234:366.612,131.36:0.417958,1.14937:0.120619,0.879405,7.83593e-05	0/0:34:0.981324:18,18:17-19,17-19:15,4,0,14:17,3|18,12:5,2|6,1|7,1|9,2|10,2|11,1|14,2|16,1|17,2:221.142:326.675,113.385:0.393557,0.393557:4.0892e-18,0.016289,0.983747
+chr1	5312324	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5312357;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999867:17,17:17-19,17-19:17,19,0,3:17,17:5,1|8,1|11,1:278.5:366.612,131.36:0.507951,0.507951:3.43283e-35,6.11318e-05,0.999941	0/0:33:0.869753:17,17:16-17,16-17:17,9,0,7:16,3|17,14:4,1|8,3|13,1|16,2:218.032:326.675,113.385:0.419363,0.419363:3.86306e-25,0.13016,0.869937
+chr1	5318871	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=5318898;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.960449:19,19:17-19,17-19:13,14,0,7:18,2|19,11:7,1|9,1|10,2|12,1|13,1|15,1:251.315:366.612,131.36:0.628225,0.628225:0.0,0.0,1.0	0/0:38:0.999671:14,14:14-14,14-14:16,10,0,11:14,16:4,1|5,1|7,1|8,1|9,1|11,2|12,2|13,2:246.933:326.675,113.385:0.0,0.0:1.71366e-21,0.00011102,0.999888
+chr1	5327635	.	CTCTTTCCCTCTTTCCCTCTTTCC	CTCTTTCC	.	.	END=5327658;RU=ctctttcc;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.325739:1,1:1-3,1-3:0,19,0,0:NULL:NULL:172.932:366.612,131.36:0.978146,0.978146:0.565034,0.384922,0.0501882	0/0:25:0.985248:3,3:3-3,3-3:10,15,0,0:3,10:NULL:176.475:326.675,113.385:0.19802,0.19802:5.32981e-25,0.013287,0.986741
+chr1	5333023	.	TATATATATATATATA	TATATATATATATATATATATA	.	.	END=5333038;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.441393:11,11:10-13,10-13:9,9,0,0:10,2|11,7:NULL:122.896:366.612,131.36:1.11059,1.11059:1.78662e-29,0.0036561,0.996353	0/0:8:0.802531:8,8:8-8,8-8:6,2,0,0:8,6:NULL:42.6017:326.675,113.385:0.0,0.0:6.33462e-08,0.0949859,0.905114
+chr1	5334011	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5334042;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.702044:19,20:19-21,19-21:7,12,0,13:19,3|20,4:6,2|7,1|8,4|9,1|12,1|13,2|14,2:248.604:366.612,131.36:0.830386,0.473387:0.0,0.0,1.0	0/0:22:0.991203:16,16:16-16,16-16:14,4,0,4:15,2|16,12:5,1|10,1|13,1|15,1:131.76:326.675,113.385:0.139319,0.139319:1.15746e-14,0.00625518,0.99376
+chr1	5337377	.	TTTATTTATTTA	.	.	.	END=5337388;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:237.645:366.612,131.36:0.0,0.0:0.0,6.40429e-07,1.0	0/0:33:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:202.756:326.675,113.385:0.0,0.0:0.0,2.36752e-05,0.999979
+chr1	5340739	.	TATTTATTTATT	.	.	.	END=5340750;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.707:366.612,131.36:0.0,0.0:0.0,1.97523e-05,0.99998	0/0:16:0.983407:3,3:3-3,3-3:9,5,0,2:3,9:2,2:96.8479:326.675,113.385:0.0,0.0:4.01017e-31,0.00686109,0.993158
+chr1	5341947	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	.	END=5341974;RU=aagg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99808:7,7:7-7,7-7:13,15,0,3:7,13:2,1|4,1|6,1:218.78:366.612,131.36:0.0,0.0:7.99043e-36,0.0014034,0.998602	0/0:27:0.979243:7,7:6-7,6-7:9,15,0,2:7,9:6,2:192.077:326.675,113.385:0.442564,0.442564:5.8151e-25,0.0143806,0.985652
+chr1	5357169	.	GGGTGGGTGGGT	.	.	.	END=5357180;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.608255:3,3:3-3,3-3:4,11,0,0:3,4:NULL:112.0:366.612,131.36:0.19802,0.19802:2.62201e-11,0.214101,0.785943	0/0:33:0.984164:3,3:3-3,3-3:9,24,0,0:3,9:NULL:245.497:326.675,113.385:0.0,0.0:2.5687e-24,0.0106184,0.989403
+chr1	5365050	.	CCTCCCTCCCTC	.	.	.	END=5365061;RU=cctc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:31,22,0,0:3,31:NULL:322.918:366.612,131.36:0.0,0.0:0.0,4.07982e-09,1.0	0/0:38:1.0:3,3:3-3,3-3:27,9,0,2:3,27:2,2:205.87:326.675,113.385:0.0,0.0:0.0,1.47401e-08,1.0
+chr1	5368230	.	CTCTTGCGCTCTTGCGCTCTTGCGCTCTTGCG	CTCTTGCGCTCTTGCGCTCTTGCG	.	.	END=5368261;RU=ctcttgcg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.882176:3,3:3-11,3-11:20,27,0,2:3,20:2,1|11,1:362.233:366.612,131.36:3.12646,3.12646:0.882095,0.118006,0.0	0/0:36:0.999916:4,4:4-4,4-4:16,17,0,3:4,16:3,3:243.009:326.675,113.385:0.0,0.0:0.0,8.91984e-05,0.999911
+chr1	5368294	.	CTTGCACTCTTGCACTCTTGCACT	.	.	.	END=5368317;RU=cttgcact;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.997641:3,3:3-3,3-3:14,25,0,0:3,14:NULL:292.044:366.612,131.36:0.0,0.0:2.19494e-38,0.002326,0.997678	0/0:35:0.999965:3,3:3-3,3-3:18,17,0,0:3,18:NULL:235.837:326.675,113.385:0.0,0.0:0.0,4.25038e-05,0.999957
+chr1	5369349	.	GTTTGTTTGTTT	.	.	.	END=5369360;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:19,13,0,0:3,19:NULL:193.077:366.612,131.36:0.0,0.0:0.0,7.50507e-06,0.999994	0/0:21:0.999752:3,3:3-3,3-3:15,4,0,2:3,15:2,2:112.933:326.675,113.385:0.0,0.0:0.0,8.85613e-05,0.999911
+chr1	5369470	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT	.	.	END=5369505;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:17:0.65517:13,13:13-14,13-14:5,11,0,0:13,5:NULL:125.134:366.612,131.36:0.44763,0.44763:1.0,0.0,0.0	1/1:8:0.0133204:12,12:15-19,15-19:0,5,0,0:NULL:NULL:47.5052:326.675,113.385:1.68323,1.68323:0.354018,0.483083,0.162943
+chr1	5374204	.	TTTGTTTGTTTGTTTG	.	.	.	END=5374219;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999829:4,4:3-4,3-4:16,13,0,0:4,16:NULL:181.117:366.612,131.36:0.390807,0.390807:0.0,0.000140681,0.999864	0/0:21:0.999914:4,4:4-4,4-4:17,4,0,0:4,17:NULL:104.508:326.675,113.385:0.0,0.0:0.0,5.65094e-05,0.999947
+chr1	5380595	.	ACACACACACAC	.	.	.	END=5380606;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.995403:6,6:6-6,6-6:11,12,0,0:6,11:NULL:153.893:366.612,131.36:0.0,0.0:6.47033e-27,0.00291211,0.997095	0/0:36:1.0:6,6:6-6,6-6:23,13,0,0:6,23:NULL:210.926:326.675,113.385:0.0,0.0:0.0,8.84609e-07,1.0
+chr1	5380856	.	TCTGTCTGTCTG	.	.	.	END=5380867;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:33,15,0,0:3,33:NULL:268.978:366.612,131.36:0.0,0.0:0.0,8.82469e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:30,12,0,2:3,30:2,2:243.845:326.675,113.385:0.0,0.0:0.0,3.59975e-09,1.0
+chr1	5380890	.	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5380943;RU=ca;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:55:0.293781:21,25:21-21,21-28:16,16,0,23:20,2|21,14:7,2|8,1|9,2|11,1|12,2|13,1|14,2|16,1|17,1|18,1|19,2|20,4|21,1|23,1|25,1:422.02:366.612,131.36:0.0,1.90161:0.574979,0.425105,0.0	0/0:43:0.937524:27,27:18-27,18-27:8,15,0,18:27,8:7,1|9,1|11,2|12,1|13,1|14,1|17,2|18,1|22,3|23,1|25,3|26,1:317.864:326.675,113.385:4.08564,4.08564:5.81294e-08,0.0327406,0.967321
+chr1	5382870	.	GAGGAAGAGGAAGAGGAA	.	.	.	END=5382887;RU=gaggaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.00001:3,3:3-3,3-3:21,18,0,6:3,21:2,6:284.486:366.612,131.36:0.0,0.0:0.0,1.09993e-06,1.0	0/0:34:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:197.584:326.675,113.385:0.0,0.0:0.0,2.89385e-06,1.0
+chr1	5384698	.	AGAAAGAAAGAAAGAA	.	.	.	END=5384713;RU=agaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.951299:4,4:4-4,4-4:8,1,0,0:4,8:NULL:42.0356:366.612,131.36:0.0,0.0:8.24126e-27,0.0253717,0.974677	0/0:13:0.994208:4,4:3-4,3-4:11,1,0,0:4,11:NULL:52.2596:326.675,113.385:0.452422,0.452422:1.09039e-36,0.00304955,0.996958
+chr1	5384783	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5384850;RU=ga;PERIOD=2;REF=34.0;EXPTHRESH=34	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0170297:37,37:25-38,25-38:0,6,0,7:NULL:5,1|15,1|17,1|18,1|21,1|25,1|37,1:109.943:366.612,131.36:4.88194,4.88194:9.74187e-08,0.688895,0.311118	1/1:10:0.00722649:26,26:24-35,24-35:0,3,0,4:NULL:5,1|8,1|13,1|15,1:59.5948:326.675,113.385:2.9505,2.9505:0.523716,0.401562,0.0748556
+chr1	5384864	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA,AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	END=5384923;RU=agaa;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:24:0.811644:14,14:14-14,14-14:5,12,0,7:14,5:5,1|7,2|10,2|13,1|14,1:181.954:366.612,131.36:0.0,0.0:0.884619,0.115484,8.42783e-10	1/0:18:0.995891:13,15:13-15,15-15:7,6,0,5:13,2|15,5:7,1|9,1|12,2|13,1:128.201:326.675,113.385:0.825531,0.0:1.40358e-11,0.996498,0.00350955
+chr1	5390035	.	CCTCCTCCTCCT	.	.	.	END=5390046;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:30,20,0,0:4,30:NULL:303.92:366.612,131.36:0.0,0.0:0.0,1.00316e-08,1.0	0/0:42:1.0:4,4:3-4,3-4:25,13,0,3:4,25:3,3:233.407:326.675,113.385:0.21692,0.21692:0.0,8.32903e-08,1.0
+chr1	5391563	.	TTTCTTTCTTTC	.	.	.	END=5391574;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:20,19,0,3:3,20:2,3:279.261:366.612,131.36:0.0,0.0:0.0,3.85061e-06,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.858:326.675,113.385:0.0,0.0:0.0,2.44321e-06,1.0
+chr1	5393656	.	TTTATTTATTTA	.	.	.	END=5393667;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:212.9:366.612,131.36:0.0,0.0:0.0,3.37619e-07,1.0	0/0:22:0.99984:3,3:3-3,3-3:16,6,0,0:3,16:NULL:119.896:326.675,113.385:0.0,0.0:0.0,8.31027e-05,0.999918
+chr1	5400536	.	GGGGTGGGGGTGGGGGTG	.	.	.	END=5400553;RU=ggggtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.952146:3,3:2-3,2-3:8,22,0,2:3,8:2,2:250.206:366.612,131.36:0.309,0.309:3.00685e-21,0.0377962,0.962271	0/0:22:0.986756:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.634:326.675,113.385:0.0,0.0:5.56677e-27,0.00952345,0.990499
+chr1	5400652	.	TAAATAAATAAATAAA	.	.	.	END=5400667;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999912:4,4:4-4,4-4:18,18,0,0:4,18:NULL:240.227:366.612,131.36:0.0,0.0:0.0,8.34338e-05,0.999918	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:169.93:326.675,113.385:0.0,0.0:0.0,2.37959e-06,1.0
+chr1	5401591	.	CAAACAAACAAACAAACAAA	.	.	.	END=5401610;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:20,21,0,2:5,20:3,1|4,1:287.227:366.612,131.36:0.0,0.0:0.0,1.04435e-05,0.999993	0/0:34:0.998896:5,5:4-5,4-5:15,18,0,0:5,15:NULL:226.268:326.675,113.385:0.284901,0.284901:5.5e-44,0.00102301,0.998982
+chr1	5407272	.	AATAAATAAATAAATA	.	.	.	END=5407287;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:33,17,0,2:4,33:3,2:299.722:366.612,131.36:0.0,0.0:0.0,6.38711e-10,1.0	0/0:56:1.0:4,4:4-4,4-4:32,20,0,4:4,32:2,2|3,1|4,1:340.155:326.675,113.385:0.0,0.0:0.0,1.50266e-09,1.0
+chr1	5411524	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5411557;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:0.878383:17,17:12-17,12-17:26,17,0,21:16,8|17,18:5,2|7,3|9,2|10,2|12,4|13,4|15,3|16,1:447.231:366.612,131.36:1.11306,1.11306:1.04022e-17,0.121721,0.878381	0/0:56:0.900944:17,17:16-17,16-17:21,16,0,19:16,6|17,15:4,1|5,3|6,1|9,1|10,4|11,1|12,2|13,1|14,2|15,3:398.882:326.675,113.385:0.437216,0.437216:2.70896e-15,0.0991223,0.900982
+chr1	5412318	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=5412335;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.340536:9,9:7-10,7-10:16,7,0,0:7,2|9,12|10,2:NULL:147.298:366.612,131.36:1.18233,1.18233:5.7347e-20,0.61885,0.381204	0/0:22:0.999588:9,9:9-9,9-9:15,5,0,2:9,15:7,2:121.002:326.675,113.385:0.0,0.0:1.725e-24,0.000183454,0.999819
+chr1	5412585	.	GCAGGCAGGCAG	.	.	.	END=5412596;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:29,11,0,2:3,29:2,2:231.295:366.612,131.36:0.0,0.0:0.0,5.35748e-09,1.0	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:141.585:326.675,113.385:0.0,0.0:0.0,5.03885e-06,0.999995
+chr1	5414201	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5414252;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.277101:22,30:21-22,20-32:13,10,0,12:20,3|21,2|22,8:5,1|9,2|10,1|11,1|13,1|14,2|16,1|17,1|21,1|29,1:264.281:366.612,131.36:0.19802,4.38695:0.000455048,0.999546,6.6337e-28	0/0:27:0.799191:26,26:26-26,26-26:6,5,0,16:26,6:4,1|5,2|8,1|11,1|13,1|15,1|16,2|17,1|18,1|20,1|21,1|22,1|25,2:200.894:326.675,113.385:0.0,0.0:2.87718e-07,0.0580028,0.942083
+chr1	5420026	.	ATGTATGTATGT	.	.	.	END=5420037;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:182.254:366.612,131.36:0.0,0.0:0.0,6.34021e-06,0.999994	0/0:20:0.999831:3,3:3-3,3-3:16,4,0,0:3,16:NULL:101.288:326.675,113.385:0.0,0.0:0.0,9.05735e-05,0.999911
+chr1	5421453	.	AGAAAAGAAAAGAAA	.	.	.	END=5421467;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:232.041:366.612,131.36:0.0,0.0:0.0,1.245e-07,1.0	0/0:27:0.99925:3,3:3-3,3-3:14,11,0,2:3,14:2,2:171.015:326.675,113.385:0.0,0.0:1.787e-42,0.000363445,0.999637
+chr1	5421483	.	AACAAACAAACAAACA	.	.	.	END=5421498;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999137:4,4:4-4,4-4:14,12,0,5:4,14:2,2|3,3:205.526:366.612,131.36:0.0,0.0:2.6384e-41,0.000376896,0.999628	0/0:23:0.98592:4,4:4-4,4-4:10,10,0,3:4,10:2,3:155.459:326.675,113.385:0.0,0.0:7.92884e-30,0.00829948,0.991719
+chr1	5421960	.	TTTGTTTGTTTG	.	.	.	END=5421971;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999768:3,3:3-3,3-3:15,7,0,2:3,15:2,2:142.043:366.612,131.36:0.0,0.0:0.0,9.03633e-05,0.999911	0/0:22:0.998824:3,3:2-3,2-3:13,8,0,0:3,13:NULL:131.18:326.675,113.385:0.452422,0.452422:2.207e-42,0.000683346,0.999318
+chr1	5429464	.	GGGTGGGTGGGT	.	.	.	END=5429475;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.947173:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.027:366.612,131.36:0.19802,0.19802:4.74538e-22,0.0328576,0.967201	0/0:35:0.992779:3,3:3-3,3-3:10,25,0,0:3,10:NULL:265.199:326.675,113.385:0.0,0.0:1.95984e-27,0.00480293,0.995206
+chr1	5439295	.	AAATAAATAAAT	.	.	.	END=5439306;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,15,0,2:3,37:2,2:300.503:366.612,131.36:0.0,0.0:0.0,4.26324e-11,1.0	0/0:34:0.999972:3,3:3-3,3-3:17,14,0,3:3,17:2,3:218.014:326.675,113.385:0.0,0.0:0.0,1.9811e-05,0.99998
+chr1	5439862	.	AAAAACAAAAACAAAAAC	.	.	.	END=5439879;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:37,18,0,0:3,37:NULL:309.002:366.612,131.36:0.0,0.0:0.0,7.11533e-11,1.0	0/0:42:1.0:3,3:3-3,3-3:28,12,0,2:3,28:2,2:231.902:326.675,113.385:0.0,0.0:0.0,2.05311e-08,1.0
+chr1	5439880	.	CAAGCAAGCAAG	.	.	.	END=5439891;RU=caag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:316.843:366.612,131.36:0.0,0.0:0.0,1.11968e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:28,14,0,2:3,28:2,2:247.995:326.675,113.385:0.0,0.0:0.0,1.62076e-08,1.0
+chr1	5440024	.	AAAACAAAACAAAAC	.	.	.	END=5440038;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,14,0,2:3,30:2,2:270.182:366.612,131.36:0.0,0.0:0.0,1.14812e-08,1.0	0/0:36:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:183.432:326.675,113.385:0.0,0.0:0.0,2.03527e-08,1.0
+chr1	5448684	.	GTGGTGGTGGTG	.	.	.	END=5448695;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:20,13,0,2:4,20:3,2:202.444:366.612,131.36:0.0,0.0:0.0,3.08094e-06,1.0	0/0:27:0.999992:4,4:4-4,4-4:19,8,0,0:4,19:NULL:144.751:326.675,113.385:0.0,0.0:0.0,1.63653e-05,0.999986
+chr1	5448817	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5448840;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.99861:6,6:6-6,6-6:13,8,0,3:6,13:3,1|4,2:144.918:366.612,131.36:0.0,0.0:1.36302e-38,0.000751979,0.999249	0/0:27:0.982701:6,6:6-6,6-6:9,13,0,5:6,9:2,1|4,2|5,2:191.308:326.675,113.385:0.0,0.0:8.67818e-27,0.0079832,0.992034
+chr1	5448857	.	AAACAAAACAAAACA	.	.	.	END=5448871;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.984248:3,3:3-3,3-3:9,8,0,0:3,9:NULL:107.217:366.612,131.36:0.0,0.0:1.10938e-30,0.00908823,0.990933	0/0:21:0.937648:3,3:3-3,3-3:8,13,0,0:3,8:NULL:154.225:326.675,113.385:0.220506,0.220506:1.31029e-26,0.0483356,0.95174
+chr1	5449710	.	TTTCTTTCTTTC	.	.	.	END=5449721;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:243.822:366.612,131.36:0.0,0.0:0.0,1.68455e-07,1.0	0/0:47:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:251.345:326.675,113.385:0.0,0.0:0.0,3.88499e-10,1.0
+chr1	5450202	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5450241;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.998109:25,25:25-27,25-27:14,20,0,18:25,14:5,3|6,3|7,2|9,1|11,1|14,1|15,1|17,2|18,2|22,1|25,1:392.37:366.612,131.36:0.480581,0.480581:0.0,0.0,1.0	0/0:73:0.91676:20,20:19-20,19-20:20,22,0,30:18,2|19,4|20,14:6,1|7,2|8,2|9,4|10,2|11,3|13,4|14,1|15,2|17,2|18,3|19,4:532.856:326.675,113.385:0.391308,0.391308:2.08895e-13,0.0831682,0.916927
+chr1	5457139	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5457182;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.986189:19,20:16-21,19-21:11,21,0,10:19,6|20,5:8,1|14,2|15,2|16,1|17,1|18,1|19,2:333.91:366.612,131.36:0.831565,0.667418:0.999903,9.76201e-05,1.34211e-13	0/3:41:0.947557:22,23:22-22,21-23:22,8,0,11:20,2|21,5|22,15:5,1|6,1|10,1|14,1|16,1|17,1|18,1|19,1|21,2|23,1:292.012:326.675,113.385:0.0990099,0.738271:2.52359e-16,0.000188425,0.999812
+chr1	5457182	.	GAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5457205;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:0.877325:12,12:7-13,7-13:24,22,0,2:8,2|12,19|13,3:8,1|12,1:339.915:366.612,131.36:2.23609,2.23609:8.74e-43,0.00860933,0.991412	0/0:39:0.980078:12,12:10-12,10-12:21,12,0,6:10,2|11,2|12,17:8,1|9,1|10,2|11,2:261.833:326.675,113.385:0.640587,0.640587:1.28858e-27,0.0199597,0.980082
+chr1	5458563	.	GTTGGTTGGTTG	.	.	.	END=5458574;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999991:3,3:3-3,3-3:18,14,0,2:3,18:2,2:209.978:366.612,131.36:0.0,0.0:0.0,1.73614e-05,0.999986	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:191.171:326.675,113.385:0.0,0.0:0.0,2.52026e-07,1.0
+chr1	5467842	.	TTGTTTGTTTGT	.	.	.	END=5467853;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:179.754:366.612,131.36:0.0,0.0:0.0,9.2688e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.865:326.675,113.385:0.0,0.0:0.0,8.0646e-07,1.0
+chr1	5469905	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5469964;RU=ttct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:27:0.779798:15,16:15-15,15-17:9,12,0,5:15,7|16,2:8,1|10,2|13,1|14,1:199.013:366.612,131.36:0.19802,0.57834:9.18276e-12,0.00672041,0.993294	0/0:61:0.998617:15,15:13-16,13-16:13,23,0,23:15,13:2,1|4,2|5,1|7,1|8,2|9,2|10,2|11,6|12,2|13,1|14,3:441.154:326.675,113.385:0.554102,0.554102:2.05185e-19,0.000934836,0.999067
+chr1	5470375	.	ATTTATTTATTTATTTATTT	.	.	.	END=5470394;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999856:5,5:5-5,5-5:16,12,0,2:5,16:4,2:185.188:366.612,131.36:0.0,0.0:0.0,6.52832e-05,0.999934	0/0:35:1.0:5,5:4-5,4-5:19,10,0,5:5,19:4,5:204.259:326.675,113.385:0.270063,0.270063:0.0,5.63075e-06,0.999995
+chr1	5487012	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=5487095;RU=aga;PERIOD=3;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.0641902:1,25:1-27,19-27:0,16,0,6:NULL:7,1|15,1|19,1|21,1|24,1|25,1:194.376:366.612,131.36:10.4167,2.80123:0.814845,0.18449,0.000731844	3/3:29:0.0350084:26,26:26-28,26-28:0,13,0,14:NULL:5,1|8,1|10,1|15,2|16,1|19,1|21,1|22,3|24,1|26,2:224.711:326.675,113.385:0.788731,0.788731:0.213982,0.516544,0.269537
+chr1	5487104	.	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	.	.	END=5487154;RU=gag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.221203:19,19:16-19,16-19:2,9,0,5:19,2:5,1|7,1|8,1|9,1|10,1:132.591:366.612,131.36:1.14809,1.14809:3.42417e-06,0.223225,0.776813	0/0:17:0.227302:17,17:10-17,10-17:3,6,0,7:17,3:5,2|7,1|8,1|10,2|11,1:122.998:326.675,113.385:3.21628,3.21628:1.88104e-06,0.621967,0.378086
+chr1	5491577	.	TTTCTTTCTTTCTTTC	.	.	.	END=5491592;RU=tttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999683:4,4:4-4,4-4:15,6,0,0:4,15:NULL:111.491:366.612,131.36:0.0,0.0:0.0,0.00020738,0.999796	0/0:32:0.999873:4,4:4-4,4-4:16,14,0,2:4,16:2,1|3,1:203.31:326.675,113.385:0.0,0.0:0.0,7.7951e-05,0.999925
+chr1	5495145	.	TATTATTATTAT	.	.	.	END=5495156;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999919:4,4:4-4,4-4:17,17,0,2:4,17:3,2:230.211:366.612,131.36:0.0,0.0:0.0,4.36298e-05,0.999957	0/0:34:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:190.37:326.675,113.385:0.0,0.0:0.0,9.03848e-07,1.0
+chr1	5499413	.	AAACAAACAAAC	.	.	.	END=5499424;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999984:3,3:3-3,3-3:18,9,0,0:3,18:NULL:151.645:366.612,131.36:0.0,0.0:0.0,1.95113e-05,0.99998	0/0:36:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:183.415:326.675,113.385:0.0,0.0:0.0,3.58705e-08,1.0
+chr1	5499767	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	AT	.	.	END=5499818;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00139684:1,1:1-3,1-3:0,4,0,0:NULL:NULL:36.3001:366.612,131.36:0.748295,0.748295:0.364437,0.535353,0.100301	.
+chr1	5504534	.	TATTTATTTATT	.	.	.	END=5504545;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,25,0,2:3,29:2,2:358.683:366.612,131.36:0.0,0.0:0.0,1.36141e-08,1.0	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:216.165:326.675,113.385:0.0,0.0:0.0,3.61663e-07,1.0
+chr1	5513530	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5513567;RU=tc;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.31293:23,23:19-24,19-24:3,13,0,9:23,3:4,1|6,1|7,1|9,1|10,1|18,1|20,1|22,1|23,1:206.714:366.612,131.36:2.04637,2.04637:2.11561e-29,0.066714,0.93338	0/0:34:0.987245:19,19:11-19,11-19:11,10,0,11:19,11:5,1|6,1|8,1|9,1|13,2|14,2|15,3:226.557:326.675,113.385:3.57627,3.57627:1.20532e-13,0.00759209,0.992424
+chr1	5516671	.	TCTCTCTCTCTCTC	.	.	.	END=5516684;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:33,10,0,3:7,33:6,3:244.379:366.612,131.36:0.0,0.0:0.0,5.01572e-10,1.0	0/0:24:0.999066:7,7:7-8,7-8:14,9,0,0:7,14:NULL:143.434:326.675,113.385:0.390807,0.390807:7.46736e-28,0.000425895,0.999576
+chr1	5518233	.	ACACACACACAC	.	.	.	END=5518244;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:6,6:6-6,6-6:20,8,0,0:6,20:NULL:155.727:366.612,131.36:0.0,0.0:4.54e-43,8.39984e-06,0.999994	0/0:40:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:203.485:326.675,113.385:0.139319,0.139319:0.0,1.84411e-08,1.0
+chr1	5522366	.	TTTATTTATTTA	.	.	.	END=5522377;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.998395:3,3:3-3,3-3:13,24,0,0:3,13:NULL:264.156:366.612,131.36:0.0,0.0:5.0445e-41,0.00110037,0.998906	0/0:35:0.99986:3,3:3-3,3-3:16,19,0,0:3,16:NULL:231.943:326.675,113.385:0.0,0.0:0.0,0.000107282,0.999895
+chr1	5526299	.	TTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTATTTATTTATTTAT	.	.	END=5526322;RU=ttat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.999594:6,9:6-9,9-9:8,13,0,2:6,2|9,6:4,1|5,1:173.311:366.612,131.36:1.17184,0.0:1.26762e-24,3.43917e-05,0.99997	0/0:20:0.999737:6,6:6-6,6-6:15,3,0,2:6,15:5,2:102.456:326.675,113.385:0.0,0.0:2.452e-42,0.000103453,0.999896
+chr1	5531371	.	AAATAAATAAATAAAT	.	.	.	END=5531386;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:22,11,0,5:4,22:2,5:220.017:366.612,131.36:0.0,0.0:0.0,1.25235e-06,1.0	0/0:29:0.999984:4,4:4-4,4-4:18,9,0,2:4,18:2,1|3,1:165.399:326.675,113.385:0.0,0.0:0.0,2.12228e-05,0.999979
+chr1	5532982	.	TGTGTGTGTGTGTGTG	TGTGTGTG	.	.	END=5532997;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.0437343:4,4:4-8,4-8:0,23,0,0:NULL:NULL:212.091:366.612,131.36:1.29055,1.29055:0.450508,0.449184,0.100457	0/0:42:1.0:8,8:8-8,8-8:27,12,0,3:8,27:6,1|7,2:250.369:326.675,113.385:0.0,0.0:1.72e-43,5.25782e-08,1.0
+chr1	5534046	.	ATGTATGTATGTATGT	.	.	.	END=5534061;RU=atgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:29,14,0,6:4,29:3,6:287.447:366.612,131.36:0.0990099,0.0990099:0.0,5.60014e-09,1.0	0/0:46:1.0:4,4:4-4,4-4:27,16,0,3:4,27:3,3:272.756:326.675,113.385:0.0,0.0:0.0,1.82221e-08,1.0
+chr1	5534075	.	TATGTATGTATGTATG	.	.	.	END=5534090;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:35,13,0,3:4,35:2,1|3,2:280.629:366.612,131.36:0.0,0.0:0.0,1.11186e-10,1.0	0/0:47:1.0:4,4:4-4,4-4:30,15,0,2:4,30:3,2:273.347:326.675,113.385:0.0,0.0:0.0,3.21582e-09,1.0
+chr1	5534127	.	TGTGTGTGTGTG	.	.	.	END=5534138;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:6,6:6-6,6-6:26,19,0,0:6,26:NULL:275.467:366.612,131.36:0.139319,0.139319:0.0,3.5554e-07,1.0	0/0:55:1.0:6,6:6-6,6-6:31,20,0,4:6,31:4,1|5,3:344.947:326.675,113.385:0.0,0.0:0.0,1.02131e-09,1.0
+chr1	5538600	.	TTTTGTTTTGTTTTG	.	.	.	END=5538614;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.793571:3,3:3-3,3-3:5,25,0,0:3,5:NULL:251.759:366.612,131.36:0.0990099,0.0990099:2.33087e-17,0.156038,0.844041	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.842:326.675,113.385:0.0,0.0:0.0,3.18443e-07,1.0
+chr1	5539245	.	AGAGAGAGAGAG	.	.	.	END=5539256;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:5-6,5-6:24,10,0,2:6,24:4,1|5,1:203.302:366.612,131.36:0.169767,0.169767:0.0,3.64039e-07,1.0	0/0:36:1.0:6,6:6-7,6-7:20,15,0,0:6,20:NULL:216.86:326.675,113.385:0.236383,0.236383:0.0,7.99914e-06,0.999994
+chr1	5541995	.	TCTATCTATCTA	.	.	.	END=5542006;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:198.958:366.612,131.36:0.0,0.0:0.0,7.97423e-06,0.999994	0/0:32:1.0:3,3:3-3,3-3:25,7,0,0:3,25:NULL:162.531:326.675,113.385:0.0,0.0:0.0,1.63627e-07,1.0
+chr1	5543920	.	AAACAAACAAACAAACAAAC	.	.	.	END=5543939;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:5,5:5-5,5-5:27,14,0,5:5,27:3,2|4,3:270.026:366.612,131.36:0.0,0.0:0.0,1.74728e-08,1.0	0/0:43:1.0:5,5:5-5,5-5:32,8,0,3:5,32:4,3:218.073:326.675,113.385:0.0,0.0:0.0,7.62889e-10,1.0
+chr1	5548928	.	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	.	.	END=5548963;RU=gtgtgc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.996997:5,5:4-6,4-6:12,16,0,2:5,12:3,2:215.759:366.612,131.36:0.563226,0.563226:0.999097,0.000907121,4.83865e-25	0/0:40:1.00001:6,6:3-6,3-6:21,12,0,6:6,21:2,1|4,1|5,4:243.175:326.675,113.385:0.650759,0.650759:0.0,1.87243e-06,1.0
+chr1	5568606	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATATATA	.	.	END=5568637;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.191459:12,12:12-13,12-13:2,0,0,0:12,2:NULL:8.72991:366.612,131.36:0.472558,0.472558:0.898586,0.101517,4.30333e-07	0/0:6:0.241205:16,16:11-16,11-16:3,0,0,0:16,3:NULL:13.3392:326.675,113.385:1.94044,1.94044:0.0041078,0.534572,0.461435
+chr1	5568681	.	TCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTC	.	.	END=5568700;RU=tc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.167585:9,9:6-10,6-10:2,1,0,0:9,2:NULL:16.2695:366.612,131.36:1.41933,1.41933:0.676238,0.323648,0.000128575	0/0:4:0.389106:10,10:10-10,10-10:3,1,0,0:10,3:NULL:20.8043:326.675,113.385:0.0,0.0:0.000122906,0.325088,0.674802
+chr1	5568724	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAG	.	.	END=5568751;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.981721:10,11:6-10,6-11:7,1,0,0:10,4|11,3:NULL:42.692:366.612,131.36:1.60988,1.61328:0.999643,0.000360942,2.85432e-12	0/0:8:0.667283:14,14:14-14,14-14:5,3,0,0:14,5:NULL:46.9753:326.675,113.385:0.0,0.0:4.33107e-07,0.162209,0.837866
+chr1	5571339	.	AACAACAACAAC	.	.	.	END=5571350;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.993811:4,4:4-4,4-4:11,9,0,0:4,11:NULL:128.626:366.612,131.36:0.0,0.0:1.40082e-30,0.0044127,0.995598	0/0:28:0.999866:4,4:2-4,2-4:16,9,0,2:4,16:3,2:161.802:326.675,113.385:0.885129,0.885129:3.8e-44,6.70363e-05,0.999934
+chr1	5573523	.	GAAAGAAAGAAAGAAA	.	.	.	END=5573538;RU=gaaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99979:4,4:4-4,4-4:15,12,0,2:4,15:3,2:184.59:366.612,131.36:0.0,0.0:1.7e-44,0.000114813,0.999887	0/0:42:1.0:4,4:4-5,4-5:23,14,0,4:4,23:3,4:249.905:326.675,113.385:0.311527,0.311527:0.0,4.699e-07,1.0
+chr1	5573587	.	AAAGAAAGAAAG	.	.	.	END=5573598;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999662:3,3:3-3,3-3:14,13,0,2:3,14:2,2:192.077:366.612,131.36:0.0,0.0:0.0,0.000165596,0.999835	0/0:41:1.0:3,3:3-3,3-3:24,15,0,2:3,24:3,2:244.91:326.675,113.385:0.0,0.0:0.0,1.01008e-07,1.0
+chr1	5579717	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5579762;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:26:0.03869:26,26:21-26,21-26:0,16,0,8:NULL:7,1|9,1|16,2|18,1|20,1|23,1|26,1:220.015:366.612,131.36:2.18267,2.18267:3.56267e-15,0.437331,0.562764	0/1:30:0.28606:23,25:21-23,21-28:4,10,0,14:23,4:5,1|6,1|8,1|9,1|12,2|13,1|14,1|15,1|17,1|21,1|22,2|25,1:229.174:326.675,113.385:0.446534,1.60396:2.90831e-11,0.000185028,0.999818
+chr1	5581808	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5581829;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999005:12,12:12-12,12-12:14,15,0,6:12,14:5,1|6,1|8,1|9,2|11,1:246.406:366.612,131.36:0.0,0.0:7.50395e-39,0.00022835,0.999773	0/0:16:0.918632:11,11:11-12,11-12:7,5,0,3:11,7:6,1|10,1|11,1:96.9763:326.675,113.385:0.40582,0.40582:1.2915e-18,0.016726,0.983311
+chr1	5585680	.	CTCTCTCTCTCT	CTCTCTCTCTCTCT	.	.	END=5585691;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.716874:6,7:6-6,6-7:13,10,0,0:6,11|7,2:NULL:153.498:366.612,131.36:0.0,0.491073:1.32097e-24,0.000262666,0.999742	0/0:19:0.985692:6,6:6-6,6-6:10,9,0,0:6,10:NULL:122.269:326.675,113.385:0.0,0.0:2.78805e-20,0.00890045,0.99112
+chr1	5589327	.	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	.	.	END=5589356;RU=ggt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.975048:12,12:12-12,12-12:9,13,0,2:12,9:7,2:169.879:366.612,131.36:0.0,0.0:3.58951e-33,0.00724252,0.992775	0/0:24:0.964384:10,10:9-10,9-10:8,11,0,4:10,8:4,1|5,1|9,2:162.775:326.675,113.385:0.465241,0.465241:2.92195e-21,0.0195605,0.980478
+chr1	5589376	.	TGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5589399;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.122528:23,23:19-23,19-23:2,12,0,0:23,2:NULL:116.017:366.612,131.36:1.34493,1.34493:0.0,0.0,1.0	0/0:28:0.992728:12,12:9-12,9-12:11,11,0,4:12,11:7,1|10,1|11,2:180.542:326.675,113.385:1.30955,1.30955:2.36841e-16,0.00337366,0.996634
+chr1	5589780	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5589835;RU=tg;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.684515:22,22:22-22,22-22:5,9,0,11:22,5:9,2|10,2|12,1|15,3|17,2|20,1:194.5:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.434615:28,28:25-29,25-29:4,10,0,15:28,4:4,1|8,2|10,2|11,1|13,2|14,2|18,2|19,1|21,1|26,1:229.133:326.675,113.385:1.42595,1.42595:5.64146e-05,0.301819,0.698134
+chr1	5592598	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5592667;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0124984:36,36:2-36,2-36:0,10,0,6:NULL:8,1|17,1|22,1|23,1|33,1|34,1:142.041:366.612,131.36:12.4172,12.4172:0.208392,0.695051,0.0966789	0/0:36:0.217245:35,35:30-35,30-35:2,17,0,16:35,2:5,1|6,2|10,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|26,1|28,1|29,1|34,2:297.947:326.675,113.385:1.11605,1.11605:0.00272634,0.394995,0.602354
+chr1	5593742	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5593777;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.887398:18,19:16-22,16-22:6,10,0,5:18,4|19,2:6,1|8,1|9,2|11,1:165.187:366.612,131.36:1.81321,1.54443:3.33702e-07,0.0161178,0.983918	0/0:40:0.971211:18,18:17-18,17-18:16,12,0,11:17,3|18,13:4,1|5,1|7,1|9,1|11,1|12,1|13,2|14,1|15,1|17,1:276.968:326.675,113.385:0.323567,0.323567:7.60834e-14,0.0281487,0.971905
+chr1	5594362	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594409;RU=acagatatcagc;PERIOD=12;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.99997:4,4:4-4,4-4:19,9,0,7:4,19:2,4|3,3:214.928:366.612,131.36:0.0,0.0:2.03387e-23,3.57251e-05,0.999964	0/0:29:0.993895:4,4:4-4,4-4:11,12,0,6:4,11:3,6:194.69:326.675,113.385:0.0,0.0:1.35695e-13,0.00487052,0.995139
+chr1	5594483	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594518;RU=acagatatcagc;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.992171:3,3:3-3,3-3:10,9,0,6:3,10:2,5|3,1:162.564:366.612,131.36:0.0,0.0:1.07008e-20,0.00423133,0.995779	0/0:27:0.99893:3,3:3-3,3-3:13,11,0,3:3,13:2,2|3,1:171.44:326.675,113.385:0.0,0.0:2.17272e-24,0.000780489,0.999225
+chr1	5601522	.	CTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5601537;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.381909:19,19:16-19,16-19:3,10,0,3:19,3:6,1|11,1|18,1:127.14:366.612,131.36:0.550196,0.550196:0.0,0.0,1.0	0/0:10:0.859694:8,8:6-8,6-8:7,2,0,0:8,7:NULL:47.0547:326.675,113.385:0.81164,0.81164:3.07523e-11,0.0813469,0.918751
+chr1	5601538	.	CACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACA	.	.	END=5601571;RU=ca;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0438883:20,20:20-23,20-23:0,8,0,7:NULL:4,1|5,1|6,2|9,1|13,2:127.313:366.612,131.36:1.37748,1.37748:0.0,0.0,1.0	1/1:12:0.226687:15,15:15-17,15-17:2,4,0,4:15,2:4,1|8,1|10,1|14,1:74.861:326.675,113.385:0.733609,0.733609:0.596184,0.403375,0.000510556
+chr1	5605789	.	TATATATATATA	.	.	.	END=5605800;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.999173:6,6:6-6,6-6:14,6,0,0:6,14:NULL:109.551:366.612,131.36:0.0,0.0:1.50464e-25,0.000455149,0.999546	0/0:11:0.680517:6,6:6-7,6-7:5,5,0,0:6,5:NULL:67.2546:326.675,113.385:0.491073,0.491073:1.41842e-09,0.179353,0.820711
+chr1	5607518	.	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTC,CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	.	.	END=5607567;RU=ccctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:6:0.0428456:7,7:2-8,2-8:0,3,0,3:NULL:5,2|6,1:47.4534:366.612,131.36:1.42106,1.42106:1.0,0.0,0.0	1/1:4:0.0418975:6,6:6-9,6-9:0,3,0,0:NULL:NULL:28.9:326.675,113.385:1.35727,1.35727:0.366524,0.478544,0.154989
+chr1	5609483	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=5609534;RU=tctt;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:27:0.457214:16,18:13-16,13-18:8,9,0,9:13,3|16,5:2,1|3,1|4,1|7,2|8,1|13,1|16,1|18,1:204.837:366.612,131.36:1.26965,2.41742:5.45352e-38,3.81258e-08,1.0	1/0:36:0.820827:12,13:8-13,13-13:9,13,0,13:12,2|13,7:4,1|5,1|6,3|7,3|9,1|10,3|12,1:260.367:326.675,113.385:1.75429,0.0:1.0024e-14,0.823073,0.176996
+chr1	5609614	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5609639;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.974538:19,24:16-24,19-24:4,6,0,3:19,2|24,2:9,1|12,1|16,1:103.857:366.612,131.36:1.59046,1.91609:0.0,0.0,1.0	0/0:20:0.542862:13,13:11-13,11-13:4,12,0,4:13,4:7,2|9,1|11,1:160.209:326.675,113.385:0.497617,0.497617:1.63911e-05,0.276384,0.723601
+chr1	5612315	.	CTGGCTGGCTGG	.	.	.	END=5612326;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998233:3,3:3-3,3-3:13,15,0,0:3,13:NULL:191.934:366.612,131.36:0.0,0.0:2.74e-42,0.00100296,0.998999	0/0:22:0.940243:3,3:3-3,3-3:7,15,0,0:3,7:NULL:175.706:326.675,113.385:0.0,0.0:7.17578e-23,0.0445383,0.955537
+chr1	5612776	.	TTTATTTATTTA	.	.	.	END=5612787;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999995:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.896:366.612,131.36:0.0,0.0:0.0,1.15696e-05,0.999987	0/0:18:0.999421:3,3:3-3,3-3:14,4,0,0:3,14:NULL:91.4822:326.675,113.385:0.0,0.0:5.724e-42,0.000277712,0.999727
+chr1	5614359	.	TCCCTCCCTCCCTCCC	.	.	.	END=5614374;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998846:4,4:4-4,4-4:13,11,0,2:4,13:2,1|3,1:165.446:366.612,131.36:0.0,0.0:3.5e-44,0.00055509,0.999447	0/0:28:0.999522:4,4:4-4,4-4:15,13,0,0:4,15:NULL:179.777:326.675,113.385:0.0,0.0:0.0,0.000362995,0.999637
+chr1	5616757	.	AAGCAAGCAAGC	.	.	.	END=5616768;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999861:3,3:3-3,3-3:16,17,0,0:3,16:NULL:219.518:366.612,131.36:0.0,0.0:0.0,8.99908e-05,0.999911	0/0:26:0.999902:3,3:3-3,3-3:16,8,0,2:3,16:2,2:151.309:326.675,113.385:0.0,0.0:0.0,4.69939e-05,0.999956
+chr1	5617140	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5617189;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:30:0.290156:25,43:24-26,23-43:5,6,0,16:25,5:5,1|6,1|8,1|12,2|14,1|20,2|21,2|22,3|23,1|24,1|43,1:206.925:366.612,131.36:0.344122,8.89312:2.08458e-12,2.3267e-06,1.0	0/0:26:0.343833:25,25:24-26,24-26:11,6,0,9:24,3|25,6|26,2:7,1|9,1|11,1|15,1|17,1|18,1|19,1|20,1|23,1:192.044:326.675,113.385:0.713833,0.713833:5.2481e-07,0.146591,0.853494
+chr1	5617615	.	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	.	.	END=5617699;RU=ttctc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.287728:17,17:14-19,14-19:2,2,0,10:17,2:6,1|7,2|11,1|12,4|16,2:101.018:366.612,131.36:0.856307,0.856307:4.75116e-05,0.26636,0.733597	1/1:9:0.0362275:20,20:16-20,16-20:0,1,0,7:NULL:4,1|6,1|10,1|13,1|15,1|16,2:57.8107:326.675,113.385:1.3165,1.3165:0.059034,0.378311,0.562803
+chr1	5618977	.	CAGCAGCAGCAG	.	.	.	END=5618988;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,18,0,0:4,23:NULL:253.62:366.612,131.36:0.0,0.0:0.0,8.95862e-07,1.0	0/0:31:0.999995:4,4:4-4,4-4:20,11,0,0:4,20:NULL:187.212:326.675,113.385:0.0,0.0:0.0,1.45056e-05,0.999987
+chr1	5620595	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5620640;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.138323:25,25:21-25,21-25:2,14,0,9:25,2:5,1|6,1|7,1|12,1|13,2|15,1|20,1|23,1:216.568:366.612,131.36:0.923821,0.923821:3.11768e-12,0.378233,0.621819	0/0:23:0.370281:23,23:22-24,22-24:6,4,0,12:22,2|23,4:6,1|7,2|11,1|12,1|18,1|19,1|20,1|21,1|22,3:165.941:326.675,113.385:0.722976,0.722976:0.000106707,0.555466,0.444532
+chr1	5623551	.	TTATTTTATTTTATT	.	.	.	END=5623565;RU=ttatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.671791:3,3:1-3,1-3:5,10,0,0:3,5:NULL:113.692:366.612,131.36:0.390054,0.390054:2.78286e-16,0.187197,0.812863	0/0:21:0.999475:3,3:3-3,3-3:14,5,0,2:3,14:2,2:115.762:326.675,113.385:0.0,0.0:1e-44,0.000232575,0.999772
+chr1	5625250	.	CACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5625297;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.291461:22,33:22-22,21-35:11,19,0,15:21,2|22,9:8,1|9,3|11,2|16,3|17,1|18,2|19,1|21,1|32,1:360.412:366.612,131.36:0.0,5.49805:9.90578e-05,0.999903,3.27363e-12	0/0:53:0.576253:24,24:23-24,23-24:22,19,0,11:23,7|24,15:7,1|8,1|10,1|12,1|16,1|20,1|21,2|22,2|23,1:376.926:326.675,113.385:0.452422,0.452422:2.10056e-11,0.4238,0.576288
+chr1	5626755	.	TATATATATATATA	TA	.	.	END=5626768;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.00338735:1,1:1-4,1-4:0,5,0,0:NULL:NULL:46.7652:366.612,131.36:0.896026,0.896026:0.0533552,0.4034,0.543409	0/0:11:0.951073:7,7:7-7,7-7:8,3,0,0:7,8:NULL:57.6703:326.675,113.385:0.0,0.0:2.05221e-11,0.0266218,0.973432
+chr1	5627434	.	ACCCACCCACCC	.	.	.	END=5627445;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.439336:3,3:3-3,3-3:3,1,0,0:3,3:NULL:21.193:366.612,131.36:0.29703,0.29703:7.97056e-09,0.185254,0.814805	0/0:13:0.981742:3,3:3-3,3-3:9,4,0,0:3,9:NULL:71.9961:326.675,113.385:0.0,0.0:7.77127e-24,0.00726744,0.992752
+chr1	5628800	.	GTGTGTGTGTGT	.	.	.	END=5628811;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999987:6,6:6-6,6-6:19,26,0,0:6,19:NULL:306.178:366.612,131.36:0.0,0.0:2.44924e-39,2.24444e-05,0.999979	0/0:32:0.999816:6,6:6-6,6-6:16,16,0,0:6,16:NULL:198.309:326.675,113.385:0.0,0.0:1.65706e-33,0.000107345,0.999895
+chr1	5634536	.	ACATACATACAT	.	.	.	END=5634547;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999781:3,3:3-3,3-3:15,18,0,2:3,15:2,2:241.613:366.612,131.36:0.0,0.0:5.3e-44,0.000139803,0.999864	0/0:24:0.999689:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.811:326.675,113.385:0.0,0.0:3.2e-44,0.000172858,0.999827
+chr1	5645300	.	CCACCCACCCACCCAC	.	.	.	END=5645315;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,14,0,3:4,26:2,1|3,2:257.308:366.612,131.36:0.0,0.0:0.0,5.39436e-08,1.0	0/0:20:0.987727:4,4:4-4,4-4:10,10,0,0:4,10:NULL:132.37:326.675,113.385:0.0,0.0:1.37064e-33,0.00887219,0.991149
+chr1	5648208	.	TTTCTTTCTTTC	.	.	.	END=5648219;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:236.188:366.612,131.36:0.0,0.0:0.0,3.50995e-06,1.0	0/0:19:0.998321:3,3:3-3,3-3:13,6,0,0:3,13:NULL:107.261:326.675,113.385:0.0,0.0:4.6e-44,0.00108233,0.998922
+chr1	5658059	.	AACCAACCAACCAACCAACCAACCAACCAACC	.	.	.	END=5658090;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.997758:8,8:8-8,8-8:12,19,0,6:8,12:5,3|6,1|7,2:270.432:366.612,131.36:0.0,0.0:4.34303e-37,0.00122251,0.998784	0/0:22:0.995541:8,8:8-8,8-8:11,4,0,7:8,11:3,2|6,2|7,3:134.487:326.675,113.385:0.0,0.0:2.63941e-34,0.0014174,0.998587
+chr1	5659996	.	ACACACACACACAC	.	.	.	END=5660009;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999491:7,7:7-7,7-7:15,22,0,2:7,15:5,2:281.623:366.612,131.36:0.0,0.0:5.3889e-37,0.000244781,0.999758	0/0:32:1.00001:7,7:7-7,7-7:23,7,0,2:7,23:5,1|6,1:172.037:326.675,113.385:0.0,0.0:0.0,5.81845e-07,1.0
+chr1	5667369	.	TTGTTTTGTTTTGTT	.	.	.	END=5667383;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999211:3,3:3-3,3-3:14,19,0,0:3,14:NULL:237.415:366.612,131.36:0.0,0.0:1e-45,0.00064475,0.999356	0/0:19:0.991355:3,3:3-3,3-3:10,9,0,0:3,10:NULL:123.116:326.675,113.385:0.0,0.0:3.09465e-33,0.00534692,0.994664
+chr1	5668188	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5668233;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.973632:17,17:16-17,16-17:16,18,0,8:16,3|17,13:5,2|7,1|8,1|13,1|15,1|16,2:309.774:366.612,131.36:0.345543,0.345543:1.0,0.0,0.0	0/0:29:0.878676:23,23:22-23,22-23:7,12,0,9:23,7:8,1|12,2|15,2|16,2|17,1|20,1:213.066:326.675,113.385:0.298675,0.298675:7.90049e-11,0.0683182,0.931775
+chr1	5668714	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5668747;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:49:0.306761:28,31:28-30,29-32:5,13,0,30:28,3|29,2:4,1|5,1|6,1|7,1|8,2|9,1|10,2|12,1|13,1|14,1|15,1|16,1|17,1|18,5|22,2|23,2|24,1|27,1|28,1|30,1|31,2:394.435:366.612,131.36:0.553571,0.556925:0.0,0.0,1.0	0/0:47:0.937667:17,17:17-18,17-18:21,12,0,12:17,18|18,3:6,1|7,1|8,2|10,2|12,1|13,1|15,3|16,1:308.257:326.675,113.385:0.334882,0.334882:4.03709e-26,5.38759e-06,0.999995
+chr1	5683487	.	CAAACAAACAAACAAA	.	.	.	END=5683502;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:221.239:366.612,131.36:0.0,0.0:0.0,1.81181e-06,1.0	0/0:32:0.999211:4,4:3-4,3-4:13,15,0,3:4,13:3,3:210.706:326.675,113.385:0.40582,0.40582:2.35e-43,0.000417593,0.999584
+chr1	5686946	.	ACTCCACTCCACTCCACTCCACTCC	.	.	.	END=5686970;RU=actcc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:5,5:5-5,5-5:20,16,0,3:5,20:3,3:251.76:366.612,131.36:0.0,0.0:0.0,1.09203e-05,0.999993	0/0:36:1.00001:5,5:5-5,5-5:21,11,0,4:5,21:3,2|4,2:214.731:326.675,113.385:0.0,0.0:0.0,1.48824e-06,1.0
+chr1	5691957	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5691994;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0317843:25,25:25-29,25-29:0,7,0,5:NULL:4,1|18,1|20,1|22,2:107.25:366.612,131.36:1.14347,1.14347:0.0,0.0,1.0	1/0:25:0.774457:18,19:16-19,19-19:6,7,0,11:18,2|19,4:6,2|7,1|8,1|9,2|10,1|13,1|17,1|18,2:184.123:326.675,113.385:1.0388,0.139319:1.04829e-05,0.781348,0.218685
+chr1	5702366	.	GGGTGGGTGGGT	.	.	.	END=5702377;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.928342:3,3:3-3,3-3:7,18,0,0:3,7:NULL:186.16:366.612,131.36:0.0,0.0:1.29376e-20,0.0464803,0.953593	0/0:39:0.952356:3,3:3-3,3-3:7,30,0,2:3,7:2,2:314.196:326.675,113.385:0.0,0.0:6.10428e-21,0.0250173,0.975031
+chr1	5703039	.	TTTCTTTCTTTC	.	.	.	END=5703050;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:177.97:366.612,131.36:0.0,0.0:0.0,6.52669e-08,1.0	0/0:23:0.999954:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.288:326.675,113.385:0.0,0.0:0.0,1.64207e-05,0.999986
+chr1	5703348	.	TCTCTCTCTCTC	.	.	.	END=5703359;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999335:6,6:6-7,6-7:14,9,0,0:6,14:NULL:139.208:366.612,131.36:0.323567,0.323567:5.59831e-29,0.000328401,0.999674	0/0:34:0.999944:6,6:6-6,6-6:17,15,0,2:6,17:5,1|6,1:213.761:326.675,113.385:0.0,0.0:4.966e-42,1.96654e-05,0.99998
+chr1	5705129	.	TTTATTTATTTA	.	.	.	END=5705140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999745:3,3:3-3,3-3:14,13,0,4:3,14:2,4:207.898:366.612,131.36:0.0,0.0:0.0,0.000127164,0.999873	0/0:29:0.999993:3,3:3-3,3-3:18,9,0,2:3,18:2,2:172.875:326.675,113.385:0.0,0.0:0.0,1.42805e-05,0.999987
+chr1	5705229	.	CCCACCCACCCA	.	.	.	END=5705240;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:230.431:366.612,131.36:0.0,0.0:0.0,2.13014e-06,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.539:326.675,113.385:0.0,0.0:0.0,2.42264e-06,1.0
+chr1	5706741	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=5706764;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999701:7,7:6-7,6-7:15,10,0,0:7,15:NULL:155.182:366.612,131.36:0.311527,0.311527:0.0,0.000164888,0.999835	0/0:29:0.99992:6,6:5-6,5-6:17,8,0,3:6,17:3,2|5,1:162.246:326.675,113.385:0.236383,0.236383:0.0,4.85328e-05,0.999955
+chr1	5708798	.	TTTATTTATTTA	.	.	.	END=5708809;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:28,18,0,0:3,28:NULL:273.838:366.612,131.36:0.0,0.0:0.0,2.28799e-08,1.0	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.191:326.675,113.385:0.0,0.0:0.0,5.58044e-06,0.999995
+chr1	5709925	.	TTCTTTCTTTCT	TTCTTTCT	.	.	END=5709936;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:1.0:2,2:2-2,2-2:19,16,0,0:2,19:NULL:225.294:366.612,131.36:0.0,0.0:0.999993,1.1175e-05,0.0	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:224.239:326.675,113.385:0.0,0.0:0.0,9.42141e-08,1.0
+chr1	5710226	.	TTGTTTTGTTTTGTTTTGTT	.	.	.	END=5710245;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:2-4,2-4:32,19,0,2:4,32:2,1|3,1:318.661:366.612,131.36:0.507951,0.507951:0.0,1.20364e-09,1.0	0/0:47:1.0:4,4:4-4,4-4:23,19,0,5:4,23:2,1|3,4:301.264:326.675,113.385:0.0,0.0:0.0,4.63585e-07,1.0
+chr1	5712340	.	AAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAAC	.	.	END=5712369;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.780734:2,2:2-2,2-2:5,14,0,0:2,5:NULL:149.149:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/0:21:0.997542:6,6:6-6,6-6:12,6,0,3:6,12:2,1|3,1|5,1:124.805:326.675,113.385:0.0,0.0:2.80473e-30,0.00135867,0.998648
+chr1	5718275	.	TTTATTTATTTA	.	.	.	END=5718286;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:246.484:366.612,131.36:0.0,0.0:0.0,3.01196e-06,1.0	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.25:326.675,113.385:0.0,0.0:0.0,2.59941e-06,1.0
+chr1	5722194	.	TATATATATATA	TATATATATATATA	.	.	END=5722205;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.999787:7,7:7-7,7-7:16,17,0,0:7,16:NULL:216.966:366.612,131.36:0.0,0.0:4.42e-42,7.55325e-05,0.999926	0/0:12:0.936977:6,6:5-7,5-7:8,2,0,0:6,8:NULL:48.6909:326.675,113.385:0.651813,0.651813:1.33637e-13,0.034441,0.965621
+chr1	5722249	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5722268;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999984:4,4:4-4,4-4:18,16,0,2:4,18:3,2:229.225:366.612,131.36:0.0,0.0:0.0,2.02604e-05,0.99998	0/0:18:0.995876:4,4:4-4,4-4:11,5,0,2:4,11:3,2:99.6182:326.675,113.385:0.0,0.0:5.11647e-38,0.0017386,0.998268
+chr1	5727994	.	ATACATACATAC	.	.	.	END=5728005;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:199.933:366.612,131.36:0.0,0.0:0.0,2.5561e-07,1.0	0/0:12:0.919973:3,3:3-3,3-3:7,5,0,0:3,7:NULL:75.9551:326.675,113.385:0.0,0.0:7.27925e-25,0.0435556,0.956519
+chr1	5733779	.	ACCCACCCACCC	.	.	.	END=5733790;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.995933:3,3:3-3,3-3:11,31,0,0:3,11:NULL:317.64:366.612,131.36:0.0,0.0:2.46417e-33,0.00271117,0.997298	0/0:22:0.930157:3,3:3-3,3-3:7,15,0,0:3,7:NULL:161.446:326.675,113.385:0.0,0.0:3.30203e-21,0.0487605,0.951318
+chr1	5742710	.	GGGTGGGTGGGT	.	.	.	END=5742721;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998455:3,3:3-3,3-3:11,27,0,2:3,11:2,2:291.594:366.612,131.36:0.0,0.0:2.44778e-34,0.000965837,0.999036	0/0:42:0.958695:3,3:3-3,3-3:7,33,0,2:3,7:2,2:337.752:326.675,113.385:0.0,0.0:8.78633e-22,0.0259419,0.974111
+chr1	5743415	.	TTTATTTATTTA	.	.	.	END=5743426;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,21,0,0:3,22:NULL:279.685:366.612,131.36:0.0,0.0:0.0,2.47098e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:27,14,0,0:3,27:NULL:231.169:326.675,113.385:0.0,0.0:0.0,4.34196e-08,1.0
+chr1	5743494	.	CCCACCCACCCACCCA	.	.	.	END=5743509;RU=ccca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.987266:4,4:4-4,4-4:10,30,0,0:4,10:NULL:311.546:366.612,131.36:0.0,0.0:2.71427e-30,0.0104821,0.989543	0/0:38:0.997609:4,4:4-4,4-4:12,23,0,3:4,12:2,1|3,2:280.913:326.675,113.385:0.0,0.0:5.76151e-36,0.00168956,0.998315
+chr1	5749087	.	CTCTTGCTCTTGCTCTTG	.	.	.	END=5749104;RU=ctcttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999994:3,3:3-3,3-3:20,23,0,2:3,20:2,2:306.234:366.612,131.36:0.0,0.0:0.0,1.8489e-05,0.999985	0/0:39:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:211.324:326.675,113.385:0.0,0.0:0.0,2.97405e-08,1.0
+chr1	5759909	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5759948;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.929275:26,26:25-26,25-26:11,14,0,14:25,2|26,9:7,1|11,3|15,2|17,1|18,1|19,1|20,1|22,1|23,1|24,1|25,1:288.672:366.612,131.36:0.195027,0.195027:0.0,0.0,1.0	0/0:31:0.96388:20,20:18-21,18-21:13,9,0,7:18,2|20,11:9,1|10,1|11,2|18,1|19,1|20,1:200.219:326.675,113.385:0.49505,0.49505:7.4202e-20,0.0325171,0.967542
+chr1	5762305	.	AGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAG	.	.	END=5762320;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:29:0.990522:8,9:8-9,9-9:8,17,0,4:8,2|9,6:4,1|5,1|7,2:232.974:366.612,131.36:0.419363,0.0990099:6.99306e-19,0.000572497,0.999431	0/0:33:0.999964:8,8:8-8,8-8:18,13,0,2:8,18:5,1|6,1:200.676:326.675,113.385:0.0,0.0:6.50713e-37,2.77855e-05,0.999972
+chr1	5769922	.	TTGTTTGTTTGTTTGTTTGT	TTGTTTGTTTGTTTGTTTGTTTGT	.	.	END=5769941;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999988:6,6:5-6,5-6:19,13,0,6:6,19:3,3|5,3:242.009:366.612,131.36:0.169767,0.169767:0.0,2.48747e-06,1.0	0/0:30:0.999919:5,5:5-5,5-5:16,10,0,4:5,16:4,4:189.343:326.675,113.385:0.0,0.0:0.0,3.41362e-05,0.99997
+chr1	5772735	.	AAATAAATAAATAAAT	.	.	.	END=5772750;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.99989:4,4:4-4,4-4:16,22,0,4:4,16:2,1|3,3:292.378:366.612,131.36:0.0,0.0:0.0,6.38866e-05,0.99994	0/0:28:0.999846:4,4:4-4,4-4:17,11,0,0:4,17:NULL:171.988:326.675,113.385:0.0,0.0:0.0,0.000125561,0.999879
+chr1	5773613	.	GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	GGAGGGGAGGGGAGGGGAGGGGAGG,GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	.	.	END=5773672;RU=ggagg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:4:0.0340636:7,7:3-7,3-7:0,0,0,4:NULL:2,1|3,1|5,1|7,1:28.2102:366.612,131.36:1.30122,1.30122:1.0,0.0,0.0	1/1:7:0.0502929:5,5:4-6,4-6:0,2,0,5:NULL:3,2|4,2|5,1:52.5778:326.675,113.385:0.782491,0.782491:1.0,0.0,0.0
+chr1	5774929	.	AAAATAAAATAAAATAAAATAAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT,AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	.	.	END=5774963;RU=aaaat;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.996759:13,14:4-13,4-14:6,11,0,2:13,4|14,2:2,2:151.098:366.612,131.36:3.55444,4.36098:9.05931e-17,0.00197197,0.998034	0/0:32:0.999866:7,7:6-7,6-7:16,9,0,6:7,16:3,2|4,2|5,2:193.838:326.675,113.385:0.311527,0.311527:6.10738e-38,9.78369e-05,0.999903
+chr1	5775613	.	AAACAAACAAACAAAC	.	.	.	END=5775628;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999805:4,4:4-4,4-4:16,15,0,0:4,16:NULL:202.513:366.612,131.36:0.0,0.0:0.0,0.000142664,0.999858	0/0:42:1.00001:4,4:4-4,4-4:21,16,0,5:4,21:3,5:266.998:326.675,113.385:0.0,0.0:0.0,1.32175e-06,1.0
+chr1	5779912	.	AATAATAATAATAAT	.	.	.	END=5779926;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.989972:5,5:5-5,5-5:10,7,0,0:5,10:NULL:100.348:366.612,131.36:0.0,0.0:2.77029e-22,0.00627996,0.993737	0/0:15:0.738405:5,5:5-5,5-5:5,10,0,0:5,5:NULL:112.525:326.675,113.385:0.29703,0.29703:1.91527e-11,0.178554,0.821514
+chr1	5780434	.	CATTGTGAGCATTGTGAGCATTGTGAG	.	.	.	END=5780460;RU=cattgtgag;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999298:3,3:3-3,3-3:13,17,0,3:3,13:2,3:230.502:366.612,131.36:0.0,0.0:6.7e-43,0.000502598,0.9995	0/0:26:0.999569:3,3:3-3,3-3:15,11,0,0:3,15:NULL:167.59:326.675,113.385:0.0,0.0:0.0,0.000368101,0.999636
+chr1	5781296	.	TTATTATTATTA	TTATTATTA	.	.	END=5781307;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99987:3,3:3-3,3-3:16,16,0,0:3,16:NULL:215.133:366.612,131.36:0.0,0.0:0.999926,7.53605e-05,1.81e-43	0/0:30:1.00001:4,4:4-4,4-4:20,8,0,2:4,20:3,2:164.757:326.675,113.385:0.0,0.0:0.0,3.46079e-06,1.0
+chr1	5783455	.	GTGGGTGGGTGG	GTGGGTGGGTGGGTGGGTGGGTGGGTGG	.	.	END=5783466;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.959332:7,7:7-7,7-7:8,3,0,0:7,8:NULL:63.0944:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/1:47:1.0:3,7:3-3,7-7:24,23,0,0:3,18|7,6:NULL:317.768:326.675,113.385:0.0,0.557277:0.0,2.32863e-16,1.0
+chr1	5785041	.	TAAATAAATAAA	.	.	.	END=5785052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999171:3,3:3-3,3-3:13,10,0,4:3,13:2,4:166.912:366.612,131.36:0.0,0.0:1.023e-42,0.000293774,0.999706	0/0:25:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:132.735:326.675,113.385:0.0,0.0:0.0,9.0504e-06,0.999994
+chr1	5785417	.	TTATTTATTTAT	.	.	.	END=5785428;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:191.362:366.612,131.36:0.0,0.0:0.0,5.39921e-08,1.0	0/0:52:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:296.537:326.675,113.385:0.0,0.0:0.0,1.65893e-09,1.0
+chr1	5791745	.	CACACACACACACA	CACACA,CACACACA	.	.	END=5791758;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.98971:3,4:3-4,3-4:6,27,0,0:3,2|4,4:NULL:277.703:366.612,131.36:0.422855,0.326282:0.999879,0.000123949,6.18505e-28	0/0:67:1.0:7,7:6-7,6-7:43,18,0,6:6,3|7,38|8,2:6,6:405.178:326.675,113.385:0.195027,0.195027:0.0,6.50369e-07,1.0
+chr1	5793084	.	AATAAATAAATA	.	.	.	END=5793095;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999877:3,3:3-3,3-3:17,13,0,2:3,17:2,2:202.902:366.612,131.36:0.0,0.0:0.0,6.08471e-05,0.999941	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:160.328:326.675,113.385:0.0,0.0:0.0,1.96478e-07,1.0
+chr1	5795883	.	TAAATAAATAAA	.	.	.	END=5795894;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:200.221:366.612,131.36:0.0,0.0:0.0,4.6765e-06,0.999995	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.643:326.675,113.385:0.0,0.0:0.0,8.64019e-08,1.0
+chr1	5796091	.	TTTGTTTTGTTTTGT	.	.	.	END=5796105;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999901:3,3:3-3,3-3:16,9,0,0:3,16:NULL:145.659:366.612,131.36:0.0,0.0:0.0,6.52105e-05,0.999934	0/0:38:1.0:3,3:3-3,3-3:30,8,0,0:3,30:NULL:194.535:326.675,113.385:0.0,0.0:0.0,4.90667e-09,1.0
+chr1	5796722	.	AATAAATAAATA	.	.	.	END=5796733;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:1-3,1-3:22,13,0,0:3,22:NULL:202.736:366.612,131.36:0.540126,0.540126:0.0,1.23798e-06,1.0	0/0:33:0.999991:3,3:2-3,2-3:18,14,0,0:3,18:NULL:203.111:326.675,113.385:0.35561,0.35561:0.0,1.86871e-05,0.999985
+chr1	5797431	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=5797454;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:1.0:5,5:5-5,5-5:35,10,0,3:5,35:2,1|4,2:256.075:366.612,131.36:0.0,0.0:1.0,1.1966e-10,0.0	0/0:36:1.0:6,6:4-6,4-6:23,6,0,5:6,23:4,3|5,2:186.325:326.675,113.385:0.410384,0.410384:0.0,4.34187e-07,1.0
+chr1	5799311	.	TATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA	.	.	END=5799348;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:9:0.486078:18,18:17-18,17-18:4,4,0,0:18,4:NULL:54.5028:366.612,131.36:0.374147,0.374147:0.76037,0.238382,0.0012729	1/0:14:0.982163:17,19:6-19,6-19:9,2,0,0:17,4|19,5:NULL:65.3645:326.675,113.385:4.72276,4.99312:1.88777e-05,0.990785,0.00921863
+chr1	5799404	.	TAAATAAATAAA	.	.	.	END=5799415;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.988207:3,3:3-3,3-3:10,8,0,0:3,10:NULL:113.088:366.612,131.36:0.0,0.0:9.73386e-29,0.00654213,0.993474	0/0:18:0.998939:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.1688:326.675,113.385:0.0,0.0:1.8887e-37,0.000540242,0.999462
+chr1	5800120	.	TTATTATTATTATTA	.	.	.	END=5800134;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999937:5,5:5-5,5-5:18,11,0,0:5,18:NULL:179.431:366.612,131.36:0.0,0.0:0.0,4.3944e-05,0.999957	0/0:22:0.99239:5,5:5-5,5-5:11,11,0,0:5,11:NULL:145.145:326.675,113.385:0.0,0.0:9.87934e-32,0.00529762,0.994716
+chr1	5803800	.	CAACAACAACAACAA	CAACAACAACAACAACAACAACAACAACAACAACAA	.	.	END=5803814;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999723:12,12:11-12,11-12:15,13,0,10:12,15:4,3|6,2|7,1|8,2|11,2:256.851:366.612,131.36:0.169767,0.169767:0.0,0.0,1.0	0/0:37:1.0:5,5:5-5,5-5:24,8,0,5:5,24:4,5:208.194:326.675,113.385:0.0,0.0:0.0,1.5221e-07,1.0
+chr1	5813834	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=5813884;RU=tct;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:14:0.279533:18,23:17-23,17-23:2,3,0,8:18,2:4,1|7,1|9,1|11,1|12,1|17,1|18,1|23,1:97.0994:366.612,131.36:1.15753,2.37116:1.86078e-27,9.98403e-06,0.999993	1/0:45:0.94456:16,17:16-17,17-17:12,23,0,10:16,3|17,9:4,1|7,1|9,1|10,1|11,2|13,1|14,1|15,1|16,1:356.573:326.675,113.385:0.469019,0.0:1.41439e-15,0.94468,0.0554052
+chr1	5813889	.	TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	TTCTT,TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	.	.	END=5813933;RU=ttctt;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/2:51:0.610104:9,12:9-9,11-13:9,22,0,20:9,9:3,2|4,2|5,1|6,4|7,3|8,5|11,2|12,1:399.269:326.675,113.385:0.0,0.613702:1e-45,9.28955e-22,1.0
+chr1	5819521	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=5819540;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.998514:6,6:6-6,6-6:14,23,0,5:6,14:2,1|3,1|4,1|5,2:314.068:366.612,131.36:0.0,0.0:0.0,0.000353151,0.999651	0/0:40:0.999981:5,5:5-5,5-5:18,15,0,7:5,18:2,1|3,4|4,2:261.639:326.675,113.385:0.0,0.0:0.0,1.39299e-05,0.999987
+chr1	5829633	.	TTCCTTCCTTCC	.	.	.	END=5829644;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.998494:3,3:3-3,3-3:13,14,0,0:3,13:NULL:182.139:366.612,131.36:0.0,0.0:1.5e-44,0.000928731,0.999074	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:244.365:326.675,113.385:0.0,0.0:0.0,5.32516e-08,1.0
+chr1	5831560	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATA	.	.	END=5831615;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0234766:1,1:1-3,1-3:0,10,0,0:NULL:NULL:87.0303:366.612,131.36:0.339533,0.339533:0.76147,0.231543,0.00702052	0/0:43:0.998937:14,14:9-15,9-15:13,13,0,15:14,13:4,1|5,1|8,3|9,3|11,1|12,1|13,5:282.937:326.675,113.385:1.39944,1.39944:8.61859e-31,0.000348108,0.999652
+chr1	5832533	.	AACAAACAAACA	AACAAACA	.	.	END=5832544;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0412102:2,2:1-3,1-3:0,16,0,0:NULL:NULL:145.95:366.612,131.36:0.587088,0.587088:0.137906,0.489938,0.372325	0/0:34:0.997564:3,3:3-3,3-3:13,21,0,0:3,13:NULL:243.631:326.675,113.385:0.0,0.0:2.98e-43,0.00208502,0.99792
+chr1	5833064	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=5833091;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.0:6,6:6-6,6-6:26,8,0,2:6,26:3,1|5,1:191.71:366.612,131.36:0.0,0.0:1.0,6.68227e-08,0.0	0/0:49:1.00001:7,7:7-7,7-7:23,16,0,10:7,23:3,2|4,2|5,2|6,4:319.451:326.675,113.385:0.0,0.0:0.0,4.69348e-07,1.0
+chr1	5836792	.	TTTTGTTTTGTTTTG	.	.	.	END=5836806;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.0532816:3,3:1-6,1-6:0,14,0,2:NULL:3,2:143.036:366.612,131.36:1.5536,1.5536:2.74641e-16,0.419007,0.581072	0/0:35:1.0:3,3:3-3,3-3:28,4,0,2:3,28:2,1|3,1:161.592:326.675,113.385:0.0,0.0:0.0,8.26137e-09,1.0
+chr1	5843531	.	GTTGTTGTTGTT	GTTGTTGTT	.	.	END=5843542;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.252266:3,3:2-4,2-4:2,17,0,0:3,2:NULL:166.713:366.612,131.36:0.665211,0.665211:0.577122,0.422964,1.17689e-06	0/0:28:0.999906:4,4:4-4,4-4:17,11,0,0:4,17:NULL:166.827:326.675,113.385:0.0,0.0:1.1e-43,6.42646e-05,0.99994
+chr1	5844583	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5844632;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.193242:25,25:22-25,22-25:2,10,0,0:25,2:NULL:100.105:366.612,131.36:1.12192,1.12192:0.0045807,0.480536,0.514971	0/0:34:0.348451:25,25:23-25,23-25:8,10,0,15:24,3|25,5:5,1|6,1|11,2|12,2|13,1|14,1|16,1|18,1|20,3|23,1|24,1:254.626:326.675,113.385:0.561658,0.561658:6.94529e-05,0.630722,0.369266
+chr1	5861282	.	ATATATATATAT	AT	.	.	END=5861293;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.00357437:1,1:1-7,1-7:0,7,0,0:NULL:NULL:64.8289:366.612,131.36:2.00328,2.00328:0.0589627,0.398793,0.542412	0/0:23:0.999911:6,6:6-6,6-6:17,6,0,0:6,17:NULL:118.354:326.675,113.385:0.0,0.0:2.05423e-27,5.61991e-05,0.999947
+chr1	5863544	.	GGGTGGGTGGGT	GGGT	.	.	END=5863555;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.0278135:1,1:3-3,3-3:0,0,0,0:NULL:NULL:-25.0:366.612,131.36:0.0,0.0:0.111169,0.444566,0.444358	0/0:36:0.849824:3,3:3-3,3-3:6,28,0,2:3,6:2,2:289.551:326.675,113.385:0.278639,0.278639:8.24928e-16,0.0757857,0.924308
+chr1	5864371	.	ATTAATTAATTA	ATTAATTAATTAATTA	.	.	END=5864382;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.992643:4,4:4-4,4-4:11,21,0,0:4,11:NULL:235.41:366.612,131.36:0.0,0.0:1.1e-44,0.00467797,0.995334	0/0:26:0.999979:3,3:3-3,3-3:18,8,0,0:3,18:NULL:146.274:326.675,113.385:0.0,0.0:0.0,1.68976e-05,0.999986
+chr1	5865370	.	TCTCTCTCTCTCTC	TCTC	.	.	END=5865383;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0027445:2,2:1-4,1-4:0,6,0,0:NULL:NULL:53.8209:366.612,131.36:0.789724,0.789724:0.0679048,0.427125,0.505172	0/0:33:1.00001:7,7:7-8,7-8:20,8,0,4:7,20:4,1|5,3:182.858:326.675,113.385:0.253975,0.253975:7.068e-42,5.16475e-06,0.999995
+chr1	5868012	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5868059;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.34883:30,30:27-30,27-30:3,9,0,8:30,3:10,1|11,1|15,1|17,1|18,1|25,1|27,2:157.6:366.612,131.36:0.5093,0.5093:0.0,0.0,1.0	0/0:38:0.848199:24,24:22-24,22-24:7,13,0,16:24,7:7,1|9,1|10,1|13,2|14,2|15,3|16,1|21,1|22,1|23,2|24,1:283.199:326.675,113.385:0.467344,0.467344:4.72747e-16,0.0181405,0.9819
+chr1	5871062	.	TATTTTATTTTATTT	.	.	.	END=5871076;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.864268:3,3:3-3,3-3:6,0,0,0:3,6:NULL:23.6225:366.612,131.36:0.0,0.0:1.2182e-18,0.0541899,0.945893	0/0:32:0.999792:3,3:3-3,3-3:15,15,0,2:3,15:2,2:213.109:326.675,113.385:0.0,0.0:3e-45,0.000128777,0.999873
+chr1	5877999	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=5878042;RU=gata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:22:0.950424:12,12:12-13,12-13:9,10,0,2:12,9:3,2:143.371:366.612,131.36:0.469019,0.469019:2.10753e-26,0.0189762,0.981064	1/1:37:0.999836:10,10:10-10,10-10:16,15,0,6:10,16:5,1|7,2|8,1|9,2:251.085:326.675,113.385:0.0,0.0:0.999909,9.38047e-05,6.43078e-23
+chr1	5882501	.	TAAATAAATAAA	.	.	.	END=5882512;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:227.145:366.612,131.36:0.0,0.0:0.0,7.88834e-07,1.0	0/0:46:1.0:3,3:3-3,3-3:36,10,0,0:3,36:NULL:229.319:326.675,113.385:0.0,0.0:0.0,1.04705e-10,1.0
+chr1	5887687	.	AGAATAGAATAGAAT	.	.	.	END=5887701;RU=agaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:21,17,0,0:3,21:NULL:243.932:366.612,131.36:0.0,0.0:0.0,4.85605e-06,0.999995	0/0:41:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:220.324:326.675,113.385:0.0,0.0:0.0,6.13223e-09,1.0
+chr1	5889757	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5889788;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.56051:19,20:18-19,18-21:12,21,0,13:18,4|19,8:5,2|6,1|7,3|13,1|14,1|16,1|18,2|20,2:371.436:366.612,131.36:0.298675,0.638748:0.0,9.94627e-11,1.0	0/0:71:0.995842:16,16:16-17,16-17:26,18,0,25:16,23|17,3:5,1|6,1|7,2|8,1|9,2|10,1|11,4|12,3|13,3|14,4|15,3:487.37:326.675,113.385:0.284901,0.284901:5.44931e-31,2.91005e-07,1.0
+chr1	5890307	.	ACAAAACAAAACAAA	.	.	.	END=5890321;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999566:3,3:3-3,3-3:15,24,0,0:3,15:NULL:282.549:366.612,131.36:0.0,0.0:0.0,0.000391388,0.999613	0/0:37:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:227.577:326.675,113.385:0.0,0.0:0.0,2.32011e-06,1.0
+chr1	5896268	.	TAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=5896295;RU=taga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.620046:11,11:7-11,7-11:4,11,0,5:11,4:8,3|9,1|11,1:157.745:366.612,131.36:1.2298,1.2298:0.0,0.0275314,0.972524	0/0:40:1.00001:7,7:7-7,7-7:22,14,0,4:7,22:3,1|4,1|5,1|6,1:252.308:326.675,113.385:0.0,0.0:2.80159e-28,3.30435e-06,1.0
+chr1	5896295	.	AGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	.	END=5896330;RU=agac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.568114:9,9:8-9,8-9:4,10,0,5:9,4:5,2|6,1|7,2:145.0:366.612,131.36:0.484441,0.484441:4.39201e-09,0.215137,0.784907	0/0:38:0.999706:9,9:9-9,9-9:15,15,0,8:9,15:5,2|6,1|7,3|8,2:261.206:326.675,113.385:0.0,0.0:1.00938e-31,0.000138485,0.999864
+chr1	5897769	.	ATATATATATAT	ATATATATATATAT	.	.	END=5897780;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:1.0:6,7:6-6,6-8:30,25,0,0:6,16|7,11|8,3:NULL:370.665:366.612,131.36:0.0,0.263076:2.2259e-32,1.54871e-13,1.0	0/0:49:0.99999:6,6:6-6,6-6:32,15,0,0:6,29|7,3:NULL:275.497:326.675,113.385:0.0990099,0.0990099:3.05501e-34,1.71758e-08,1.0
+chr1	5897783	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5897826;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.97053:23,23:22-24,22-24:19,23,0,11:22,3|23,14|24,2:4,1|5,1|9,1|10,1|14,1|15,1|19,2|20,1|21,1|22,1:391.072:366.612,131.36:0.701085,0.701085:1.6511e-30,3.98863e-05,0.999963	0/0:66:0.97549:22,22:19-23,19-23:16,22,0,25:22,14|23,2:5,2|6,1|7,3|9,2|10,4|11,3|12,2|13,3|14,2|19,2|21,1:474.739:326.675,113.385:0.657354,0.657354:1.16935e-16,0.000428123,0.999575
+chr1	5897969	.	ACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=5897986;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:49:0.471053:9,10:9-9,8-10:17,18,0,14:8,2|9,15:4,1|6,2|7,1|8,7|9,2|10,1:358.011:366.612,131.36:0.0,0.717122:3.53e-43,4.02365e-06,0.999995	0/0:55:0.944427:9,9:7-19,7-19:29,17,0,8:8,3|9,26:6,4|7,2|8,1|16,1:361.609:326.675,113.385:3.5902,3.5902:1.1e-44,5.74913e-05,0.999942
+chr1	5898251	.	TTGTTGTTGTTG	.	.	.	END=5898262;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:29,10,0,0:4,29:NULL:204.271:366.612,131.36:0.0,0.0:0.0,1.64728e-08,1.0	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:178.491:326.675,113.385:0.0,0.0:0.0,1.01053e-05,0.999993
+chr1	5899946	.	CATACATACATACATACATACATACATACATACATACATA	CATACATACATACATACATACATACATACATACATA	.	.	END=5899985;RU=cata;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.524396:9,9:8-9,8-9:14,12,0,9:8,3|9,11:3,1|5,3|6,1|7,3|8,1:244.737:366.612,131.36:0.481803,0.481803:0.999697,0.000306133,1.72282e-16	0/0:43:0.999909:10,10:10-10,10-10:17,13,0,12:10,17:3,1|4,1|5,2|6,1|7,3|8,3|9,1:279.428:326.675,113.385:0.0990099,0.0990099:2.73826e-25,4.24703e-05,0.999957
+chr1	5899987	.	GTATGTATGTAT	.	.	.	END=5899998;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999084:3,3:3-3,3-3:13,13,0,0:3,13:NULL:172.571:366.612,131.36:0.0,0.0:2.75199e-34,0.000516341,0.999485	0/0:29:1.0:3,3:3-3,3-3:19,10,0,0:3,19:NULL:170.457:326.675,113.385:0.0,0.0:0.0,1.08231e-05,0.999993
+chr1	5902689	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=5902718;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.872688:16,16:12-16,12-16:6,21,0,15:16,6:6,2|8,1|9,3|10,1|11,2|12,1|14,4|15,1:345.735:366.612,131.36:1.43308,1.43308:1.11668e-19,0.0185593,0.981481	0/0:49:0.997902:15,15:13-15,13-15:20,14,0,13:13,2|15,18:4,2|6,1|7,1|8,1|11,2|12,2|13,3|14,1:318.723:326.675,113.385:0.833449,0.833449:1.42274e-22,0.00208513,0.99792
+chr1	5903515	.	TGTTTTGTTTTGTTT	.	.	.	END=5903529;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999941:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.876:366.612,131.36:0.0,0.0:0.0,5.57718e-05,0.999948	0/0:20:0.999876:3,3:3-3,3-3:16,4,0,0:3,16:NULL:103.791:326.675,113.385:0.0,0.0:0.0,6.71815e-05,0.999934
+chr1	5907759	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5907810;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.0838707:25,25:23-26,23-26:0,30,0,12:NULL:4,1|8,1|11,1|14,1|15,1|18,2|21,2|23,1|24,1|25,1:364.098:366.612,131.36:0.655263,0.655263:0.251683,0.543114,0.205209	1/0:58:0.942176:25,26:24-26,25-26:7,26,0,24:25,4|26,3:4,1|5,2|6,1|7,3|8,1|10,1|11,1|12,2|13,2|16,1|19,2|20,1|22,1|23,1|24,1|25,3:460.169:326.675,113.385:0.314035,0.429525:0.0225164,0.950009,0.02757
+chr1	5912141	.	TAAATAAATAAA	.	.	.	END=5912152;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:22,16,0,0:3,22:NULL:237.723:366.612,131.36:0.0,0.0:0.0,3.11145e-06,1.0	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:314.115:326.675,113.385:0.0,0.0:0.0,1.17494e-10,1.0
+chr1	5915677	.	CACCACCACCACCAC	.	.	.	END=5915691;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:93:1.0:5,5:5-5,5-5:61,27,0,4:5,61:3,2|4,2:522.376:366.612,131.36:0.0,0.0:0.0,2.71225e-18,1.0	0/0:95:1.0:5,5:5-5,5-5:75,14,0,5:5,75:4,5:454.381:326.675,113.385:0.0,0.0:0.0,8.44432e-23,1.0
+chr1	5915768	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5915801;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:73:0.780363:20,20:20-21,20-21:34,20,0,18:18,2|19,5|20,22|21,5:4,1|5,1|6,3|9,3|10,1|11,1|12,1|14,1|15,2|16,2|18,2:516.966:366.612,131.36:0.451989,0.451989:0.0,8.05231e-11,1.0	0/0:85:0.999597:17,17:17-22,17-22:41,25,0,17:16,7|17,30|18,4:4,2|8,1|9,2|10,2|12,1|13,3|14,3|16,2|22,1:583.029:326.675,113.385:2.24099,2.24099:5.98141e-35,8.34372e-06,0.999994
+chr1	5918994	.	CCCTCCCTCCCT	.	.	.	END=5919005;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999912:3,3:3-3,3-3:16,13,0,0:3,16:NULL:186.507:366.612,131.36:0.0,0.0:0.0,6.56808e-05,0.999934	0/0:21:0.999354:3,3:3-3,3-3:14,7,0,0:3,14:NULL:117.558:326.675,113.385:0.0,0.0:1e-45,0.00039642,0.999606
+chr1	5919625	.	ATATATATATAT	.	.	.	END=5919636;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999156:6,6:6-6,6-6:14,22,0,0:6,14:NULL:260.754:366.612,131.36:0.0,0.0:2.20629e-24,0.000583008,0.999422	0/0:29:0.999622:6,6:6-7,6-7:15,13,0,0:6,15:NULL:171.564:326.675,113.385:0.195027,0.195027:5.98538e-26,0.000235845,0.999766
+chr1	5919950	.	GATGATGATGAT	.	.	.	END=5919961;RU=gat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999713:4,4:4-4,4-4:16,15,0,0:4,16:NULL:207.353:366.612,131.36:0.0,0.0:1.2002e-40,0.000204791,0.999797	0/0:34:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:196.784:326.675,113.385:0.0,0.0:0.0,8.43741e-07,1.0
+chr1	5922252	.	ATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATAT	.	.	END=5922279;RU=at;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.646279:16,17:16-18,17-18:6,6,0,0:16,2|17,4:NULL:90.1045:366.612,131.36:0.617841,0.304526:3.00658e-13,0.0144617,0.98557	0/0:17:0.620937:14,14:13-15,13-15:5,10,0,0:14,5:NULL:114.364:326.675,113.385:0.421694,0.421694:0.000215381,0.241347,0.758457
+chr1	5926025	.	TCTTTCTTTCTT	.	.	.	END=5926036;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:194.3:366.612,131.36:0.0,0.0:0.0,1.13297e-05,0.999993	0/0:31:0.999998:3,3:3-3,3-3:18,10,0,3:3,18:2,3:188.06:326.675,113.385:0.0,0.0:0.0,1.04438e-05,0.999993
+chr1	5927629	.	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	.	.	END=5927700;RU=gatgaa;PERIOD=6;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:92:0.497956:11,11:10-11,10-11:15,43,0,34:10,2|11,13:2,1|3,1|4,2|5,5|6,6|7,6|8,2|9,6|10,5:718.283:366.612,131.36:0.481803,0.481803:0.999993,1.10196e-05,4.5566e-31	0/0:52:0.844477:12,12:9-12,9-12:6,27,0,19:12,6:2,2|3,3|4,2|5,2|6,1|7,1|8,1|9,4|11,3:411.108:326.675,113.385:0.619742,0.619742:7.03679e-18,0.137528,0.862561
+chr1	5927964	.	ACCCACCCACCC	.	.	.	END=5927975;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:24,20,0,4:3,24:2,4:310.166:366.612,131.36:0.0,0.0:0.0,1.91414e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.966:326.675,113.385:0.0,0.0:0.0,6.46021e-06,0.999995
+chr1	5929823	.	TTTGTTTGTTTG	.	.	.	END=5929834;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,20,0,0:3,29:NULL:296.826:366.612,131.36:0.0,0.0:0.0,9.32122e-09,1.0	0/0:20:0.999841:3,3:3-3,3-3:16,2,0,2:3,16:2,2:98.7639:326.675,113.385:0.0,0.0:0.0,6.37898e-05,0.99994
+chr1	5930224	.	GTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=5930247;RU=gtt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:8,8:8-8,8-8:27,12,0,4:8,27:4,2|5,1|7,1:252.24:366.612,131.36:0.0,0.0:0.0,4.44333e-08,1.0	0/0:46:1.0:8,8:8-8,8-8:27,13,0,5:8,27:3,1|5,4:263.401:326.675,113.385:0.19802,0.19802:0.0,9.0939e-08,1.0
+chr1	5934390	.	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	.	.	END=5934474;RU=tttcc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.301504:14,14:11-14,11-14:2,14,0,21:14,2:3,2|4,2|5,3|6,2|7,2|8,1|9,2|10,3|11,2|12,1|13,1:286.328:366.612,131.36:0.676608,0.676608:0.927216,0.0728785,3.47771e-10	0/0:24:0.199924:17,17:14-17,14-17:2,11,0,11:17,2:3,1|4,2|6,1|9,2|10,3|12,1|13,1:185.373:326.675,113.385:1.49816,1.49816:8.06284e-05,0.626446,0.373523
+chr1	5940366	.	AATTAATTAATT	.	.	.	END=5940377;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999654:3,3:3-3,3-3:15,10,0,0:3,15:NULL:147.578:366.612,131.36:0.0,0.0:0.0,0.000189184,0.999812	0/0:25:0.999916:3,3:3-3,3-3:17,8,0,0:3,17:NULL:143.032:326.675,113.385:0.0,0.0:0.0,5.15884e-05,0.999949
+chr1	5940451	.	TTTGTTTTGTTTTGT	.	.	.	END=5940465;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999994:3,3:3-3,3-3:19,8,0,0:3,19:NULL:147.155:366.612,131.36:0.0,0.0:0.0,1.23806e-05,0.999987	0/0:36:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:215.504:326.675,113.385:0.0,0.0:0.0,1.34636e-06,1.0
+chr1	5941150	.	ACACACACACAC	.	.	.	END=5941161;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:20,15,0,2:6,20:4,1|5,1:232.608:366.612,131.36:0.0,0.0:3.66e-43,3.9473e-06,0.999995	0/0:43:1.0:6,6:6-6,6-6:20,20,0,3:6,20:4,1|5,2:278.91:326.675,113.385:0.0,0.0:5.56e-43,3.98785e-06,0.999995
+chr1	5942017	.	ACAAAACAAAACAAA	.	.	.	END=5942031;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:166.874:366.612,131.36:0.0,0.0:0.0,1.36527e-06,1.0	0/0:20:0.999954:3,3:3-3,3-3:17,1,0,2:3,17:2,1|3,1:90.8318:326.675,113.385:0.0,0.0:0.0,1.14842e-05,0.999988
+chr1	5945567	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5945590;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999936:6,6:5-6,5-6:17,17,0,11:6,17:2,2|3,2|4,4|5,3:307.495:366.612,131.36:0.253975,0.253975:0.0,3.38207e-05,0.99997	0/0:45:1.00001:6,6:6-6,6-6:22,18,0,5:6,22:3,1|4,1|5,3:292.462:326.675,113.385:0.0,0.0:0.0,9.82135e-07,1.0
+chr1	5946795	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5946832;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.472493:22,22:21-22,21-22:12,9,0,11:21,4|22,8:6,1|7,1|8,1|11,2|12,1|13,1|14,1|16,1|20,2:231.246:366.612,131.36:0.489073,0.489073:6.2e-44,7.10627e-05,0.999932	0/0:46:0.991405:19,19:4-21,4-21:14,19,0,9:18,2|19,12:5,1|6,1|7,1|8,1|9,1|10,1|12,1|17,1|19,1:315.022:326.675,113.385:7.29921,7.29921:2.95628e-20,0.00747542,0.992543
+chr1	5947011	.	TCCATCCATCCA	.	.	.	END=5947022;RU=tcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:27,17,0,0:3,27:NULL:260.132:366.612,131.36:0.0,0.0:0.0,3.17725e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:31,11,0,0:3,31:NULL:223.229:326.675,113.385:0.0,0.0:0.0,2.78806e-09,1.0
+chr1	5953047	.	TCATTCATTCATTCAT	.	.	.	END=5953062;RU=tcat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.998895:4,4:3-4,3-4:14,21,0,3:4,14:3,3:275.253:366.612,131.36:0.412766,0.412766:0.0,0.000556861,0.999446	0/0:36:1.00001:4,4:4-4,4-4:22,12,0,2:4,22:3,2:214.53:326.675,113.385:0.0,0.0:0.0,1.25837e-06,1.0
+chr1	5953771	.	ATTTTATTTTATTTT	.	.	.	END=5953785;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:215.118:366.612,131.36:0.0,0.0:0.0,7.59821e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:22,17,0,2:3,22:2,2:259.852:326.675,113.385:0.0,0.0:0.0,1.55559e-06,1.0
+chr1	5956109	.	AGAGAGAGAGAG	.	.	.	END=5956120;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999051:6,6:6-6,6-6:14,17,0,0:6,14:NULL:213.09:366.612,131.36:0.0,0.0:1.35846e-32,0.000674371,0.999331	0/0:37:1.0:6,6:4-6,4-6:19,14,0,2:6,19:4,1|5,1:211.292:326.675,113.385:0.699966,0.699966:1.1e-44,1.05018e-05,0.999993
+chr1	5956842	.	TTCTTTCTTTCT	.	.	.	END=5956853;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:257.7:366.612,131.36:0.0,0.0:0.0,2.2876e-10,1.0	0/0:38:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:236.194:326.675,113.385:0.0,0.0:0.0,2.68644e-06,1.0
+chr1	5958262	.	GAAGGAAGGAAGGAAGGAAG	.	.	.	END=5958281;RU=gaag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:22,15,0,0:5,22:NULL:229.447:366.612,131.36:0.0,0.0:0.0,3.26586e-06,1.0	0/0:47:1.0:5,5:5-5,5-5:27,16,0,4:5,27:2,1|4,3:283.017:326.675,113.385:0.0,0.0:0.0,4.85953e-08,1.0
+chr1	5963266	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=5963305;RU=gttt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:10,10:10-10,10-10:28,19,0,9:10,28:3,1|4,1|5,2|6,2|7,1|8,2:366.047:366.612,131.36:0.0,0.0:0.0,8.63647e-08,1.0	0/0:53:1.0:10,10:10-10,10-10:24,12,0,17:10,24:3,1|4,2|5,3|6,1|8,5|9,5:336.913:326.675,113.385:0.0,0.0:0.0,2.83696e-07,1.0
+chr1	5964606	.	ATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT	.	.	END=5964619;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.886418:12,13:7-13,7-14:14,23,0,0:10,2|11,2|12,4|13,6:NULL:290.803:366.612,131.36:1.66142,1.61043:1.54621e-36,9.18377e-06,0.999993	0/0:27:0.836108:7,7:4-7,4-7:14,10,0,0:6,3|7,11:NULL:160.179:326.675,113.385:0.862467,0.862467:2.47795e-12,0.162866,0.837207
+chr1	5964620	.	ACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC	.	.	END=5964641;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.187232:17,17:11-15,11-15:5,29,0,4:17,5:4,1|8,2|9,1:321.414:366.612,131.36:1.56711,1.56711:4.96889e-16,0.413864,0.58621	0/0:35:0.445205:11,11:9-11,9-11:12,14,0,6:10,3|11,9:4,1|5,1|6,1|9,2|10,1:234.396:326.675,113.385:0.708457,0.708457:2.48055e-09,0.553166,0.44694
+chr1	5969864	.	CCACCCACCCACCCAC	.	.	.	END=5969879;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:4,4:4-4,4-4:33,31,0,3:4,33:2,1|3,2:441.455:366.612,131.36:0.0,0.0:0.0,4.1973e-10,1.0	0/0:57:1.0:4,4:4-4,4-4:33,22,0,2:4,33:3,2:343.641:326.675,113.385:0.0,0.0:0.0,6.62047e-10,1.0
+chr1	5971172	.	TGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTT	.	.	END=5971195;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999887:4,4:4-4,4-4:16,23,0,2:4,16:2,1|3,1:291.383:366.612,131.36:0.0,0.0:0.999985,1.85909e-05,0.0	0/0:49:0.99981:6,6:5-6,5-6:28,17,0,4:5,2|6,26:2,1|3,1|4,1|5,1:310.005:326.675,113.385:0.298675,0.298675:0.0,0.000194253,0.99981
+chr1	5973006	.	ACACACACACAC	ACACACACACACACAC	.	.	END=5973017;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.937908:8,8:7-8,7-8:15,17,0,2:7,2|8,13:6,2:237.838:366.612,131.36:0.40582,0.40582:0.0,8.97946e-05,0.999911	0/0:18:0.983031:6,6:6-6,6-6:9,6,0,3:6,9:5,3:112.405:326.675,113.385:0.0,0.0:3.2648e-20,0.00572335,0.994293
+chr1	5974638	.	AAATAAATAAAT	.	.	.	END=5974649;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.994209:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.3759:366.612,131.36:0.0,0.0:2.8099e-36,0.00287796,0.997132	0/0:22:0.736692:3,3:1-3,1-3:5,17,0,0:3,5:NULL:171.101:326.675,113.385:0.507951,0.507951:1.13701e-16,0.20747,0.792576
+chr1	5974827	.	ATAATAATAATAATAATA	.	.	.	END=5974844;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.949345:6,6:4-6,4-6:8,0,0,2:6,8:3,2:47.1122:366.612,131.36:0.957892,0.957892:8.02138e-18,0.0264945,0.973556	0/0:23:0.996343:6,6:6-6,6-6:11,8,0,4:6,11:3,1|4,2|5,1:152.714:326.675,113.385:0.0,0.0:3.15835e-24,0.00184095,0.998163
+chr1	5974849	.	AAATTAAATTAAATTAAATT	AAATTAAATTAAATT	.	.	END=5974868;RU=aaatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.0334915:3,3:3-4,3-4:0,0,0,2:NULL:3,2:14.0982:366.612,131.36:0.44763,0.44763:0.0669411,0.400408,0.532829	0/0:21:0.964528:4,4:4-4,4-4:8,11,0,2:4,8:2,2:149.833:326.675,113.385:0.19802,0.19802:4.66856e-25,0.0264723,0.973578
+chr1	5976547	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5976566;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997467:4,4:4-4,4-4:12,11,0,2:4,12:3,2:157.502:366.612,131.36:0.0,0.0:1.78561e-39,0.0011616,0.998845	0/0:22:0.993463:4,4:4-4,4-4:10,10,0,2:4,10:3,2:140.83:326.675,113.385:0.0,0.0:3.90347e-33,0.00345787,0.99655
+chr1	5978570	.	AAAGAAAGAAAG	.	.	.	END=5978581;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:30,15,0,2:3,30:2,2:271.734:366.612,131.36:0.0,0.0:0.0,5.8207e-09,1.0	0/0:37:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:187.058:326.675,113.385:0.0,0.0:0.0,1.19858e-08,1.0
+chr1	5981538	.	ATAATAATAATA	.	.	.	END=5981549;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.993889:4,4:4-4,4-4:11,13,0,0:4,11:NULL:163.313:366.612,131.36:0.0,0.0:1.29433e-29,0.00370406,0.996307	0/0:24:0.9988:4,4:4-4,4-4:13,11,0,0:4,13:NULL:148.367:326.675,113.385:0.0,0.0:2.02401e-34,0.000860891,0.999142
+chr1	5990630	.	TGGATTATCTGGATTATCTGGATTATC	TGGATTATC	.	.	END=5990656;RU=tggattatc;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.220125:1,1:1-2,1-2:0,19,0,0:NULL:NULL:165.643:366.612,131.36:0.311527,0.311527:0.586116,0.37447,0.0395355	0/0:42:1.0:3,3:3-3,3-3:22,16,0,4:3,22:2,4:261.29:326.675,113.385:0.0,0.0:0.0,2.32205e-06,1.0
+chr1	5990673	.	ACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5990684;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.322577:20,20:19-20,19-20:2,14,0,6:20,2:4,1|8,2|9,1|12,1|20,1:184.95:366.612,131.36:0.661813,0.661813:0.0,0.0,1.0	0/0:36:1.0:6,6:6-6,6-6:20,13,0,3:6,20:4,1|5,2:222.117:326.675,113.385:0.0,0.0:1.71735e-39,4.97916e-06,0.999995
+chr1	5991174	.	AAAACAAAACAAAAC	AAAAC	.	.	END=5991188;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0600654:1,1:1-3,1-3:0,10,0,0:NULL:NULL:92.4002:366.612,131.36:0.485855,0.485855:0.185855,0.498351,0.315903	0/0:23:0.999999:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.705:326.675,113.385:0.0,0.0:0.0,9.51013e-06,0.999993
+chr1	5999275	.	GGGTGGGTGGGT	GGGT	.	.	END=5999286;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.00981823:1,1:1-2,1-2:0,7,0,0:NULL:NULL:58.3651:366.612,131.36:0.469019,0.469019:0.0380205,0.352752,0.609338	0/0:53:0.932367:3,3:3-3,3-3:7,44,0,2:3,7:2,2:430.394:326.675,113.385:0.278639,0.278639:6.02717e-20,0.0580408,0.942047
+chr1	6002341	.	AAATAAATAAAT	AAAT	.	.	END=6002352;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0846653:1,1:1-1,1-1:0,18,0,0:NULL:NULL:164.799:366.612,131.36:0.139319,0.139319:0.190566,0.5221,0.287427	0/0:14:0.990347:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6385:326.675,113.385:0.0,0.0:9.0193e-33,0.00438464,0.995628
+chr1	6003957	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTG,TTTGTTTG	.	.	END=6003980;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.0340808:1,2:1-3,1-3:0,9,0,0:NULL:NULL:82.4126:366.612,131.36:0.86417,0.863602:0.273918,0.532388,0.193697	0/0:16:0.993524:6,6:6-6,6-6:11,5,0,0:6,11:NULL:89.6854:326.675,113.385:0.0,0.0:5.95831e-34,0.00386801,0.996142
+chr1	6007179	.	TGTGTGTGTGTGTG	.	.	.	END=6007192;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:7,7:7-7,7-7:21,10,0,0:7,21:NULL:175.581:366.612,131.36:0.0990099,0.0990099:6.33055e-39,4.40377e-06,0.999995	0/0:23:0.999991:7,7:7-7,7-7:19,4,0,0:7,19:NULL:113.025:326.675,113.385:0.0,0.0:2.37576e-35,1.83346e-05,0.999985
+chr1	6008813	.	CACACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6008864;RU=ca;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0685445:24,24:21-24,21-24:0,10,0,16:NULL:7,2|9,1|11,2|12,2|14,1|15,1|16,1|20,2|22,1|23,1|24,2:215.675:366.612,131.36:1.34544,1.34544:0.376805,0.480889,0.142383	0/0:24:0.550003:26,26:25-26,25-26:5,10,0,8:26,5:6,1|7,1|8,1|11,3|13,1|16,1:179.894:326.675,113.385:0.35561,0.35561:3.90968e-06,0.288238,0.711762
+chr1	6010711	.	ATTTATTTATTT	.	.	.	END=6010722;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.614864:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6359:366.612,131.36:0.0,0.0:8.92207e-14,0.153957,0.846123	0/0:20:0.999907:3,3:3-3,3-3:16,4,0,0:3,16:NULL:100.387:326.675,113.385:0.0,0.0:0.0,5.41553e-05,0.999948
+chr1	6016751	.	CATACATACATA	.	.	.	END=6016762;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:186.522:366.612,131.36:0.0,0.0:0.0,2.81512e-07,1.0	0/0:20:0.999492:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.222:326.675,113.385:0.0,0.0:0.0,0.000290229,0.999712
+chr1	6022355	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=6022386;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0275954:1,1:1-4,1-4:0,12,0,0:NULL:NULL:111.669:366.612,131.36:0.805213,0.805213:0.541162,0.403616,0.0553774	0/0:59:1.0:8,8:8-8,8-8:24,21,0,12:8,24:3,6|4,1|5,2|6,2|7,1:372.745:326.675,113.385:0.0990099,0.0990099:0.0,5.46256e-07,1.0
+chr1	6023295	.	TTATTTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTAT	.	.	END=6023322;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999751:5,5:5-5,5-5:16,14,0,2:5,16:4,2:209.297:366.612,131.36:0.0,0.0:0.999948,5.54584e-05,1.1957e-41	0/0:28:0.995703:7,7:7-7,7-7:11,11,0,6:7,11:2,2|3,2|5,1|6,1:183.374:326.675,113.385:0.0,0.0:5.7497e-34,0.00238712,0.997618
+chr1	6023967	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=6023984;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.98759:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.337:366.612,131.36:0.0,0.0:3.97564e-34,0.00838731,0.99163	0/0:36:0.999955:3,3:3-3,3-3:18,18,0,0:3,18:NULL:235.55:326.675,113.385:0.0,0.0:0.0,5.44966e-05,0.999948
+chr1	6025872	.	TTTATTTATTTATTTATTTATTTATTTA	TTTATTTATTTATTTATTTATTTA	.	.	END=6025899;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.975625:6,6:5-6,5-6:10,14,0,3:6,10:2,1|3,1|5,1:200.967:366.612,131.36:0.442564,0.442564:0.993257,0.00675705,8.68775e-18	0/0:15:0.961678:7,7:7-7,7-7:8,5,0,2:7,8:3,1|6,1:92.9615:326.675,113.385:0.0,0.0:1.86636e-19,0.0193302,0.980711
+chr1	6025930	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6025961;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:15:0.0335167:23,23:23-26,23-26:0,13,0,0:NULL:NULL:131.818:366.612,131.36:0.917112,0.917112:0.0,0.0,1.0	1/0:16:0.66936:15,16:15-17,16-16:10,1,0,4:15,3|16,7:5,1|11,1|13,1|14,1:90.1498:326.675,113.385:0.59653,0.139319:1.76427e-06,0.672544,0.327468
+chr1	6033005	.	TAAATAAATAAA	.	.	.	END=6033016;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:23,12,0,3:3,23:2,3:225.16:366.612,131.36:0.0,0.0:0.0,6.25145e-07,1.0	0/0:23:0.999932:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.95:326.675,113.385:0.0,0.0:0.0,3.9076e-05,0.999963
+chr1	6033244	.	ATACATACATACATACATACATACATACATACATAC	ATACATACATACATACATACATAC,ATACATACATACATACATACATACATAC	.	.	END=6033279;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.902238:6,7:6-7,7-7:8,20,0,5:6,2|7,6:2,1|3,2|5,2:264.045:366.612,131.36:0.478946,0.0990099:0.999545,0.000455991,4.64201e-20	0/0:18:0.906221:9,9:9-9,9-9:7,8,0,3:9,7:3,1|4,1|7,1:124.6:326.675,113.385:0.29703,0.29703:3.74206e-17,0.0603248,0.939766
+chr1	6033357	.	ATATATATATATATAT	.	.	.	END=6033372;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999213:8,8:8-8,8-8:14,15,0,0:8,14:NULL:202.918:366.612,131.36:0.0,0.0:7.41025e-23,0.000450359,0.999552	0/0:14:0.987169:8,8:8-8,8-8:10,4,0,0:8,10:NULL:77.138:326.675,113.385:0.0,0.0:2.36841e-16,0.00686831,0.99315
+chr1	6034894	.	GGCAGGCAGGCAGGCA	.	.	.	END=6034909;RU=ggca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.990581:4,4:4-4,4-4:11,20,0,0:4,11:NULL:229.918:366.612,131.36:0.0,0.0:5.80723e-36,0.00742497,0.992595	0/0:19:0.967518:4,4:4-4,4-4:8,9,0,2:4,8:3,2:131.181:326.675,113.385:0.0,0.0:2.16302e-26,0.0180274,0.98201
+chr1	6041090	.	AAAATAAAATAAAAT	.	.	.	END=6041104;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999995:3,3:3-3,3-3:20,23,0,0:3,20:NULL:296.664:366.612,131.36:0.0,0.0:0.0,1.48067e-05,0.999987	0/0:52:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:317.917:326.675,113.385:0.0,0.0:0.0,1.53151e-08,1.0
+chr1	6041134	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6041161;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999963:7,7:5-7,5-7:18,17,0,5:7,18:3,1|5,3|6,1:268.322:366.612,131.36:0.597351,0.597351:0.0,3.16593e-05,0.999971	0/0:53:1.0:7,7:7-7,7-7:28,16,0,8:7,28:2,2|3,3|5,1|6,2:317.829:326.675,113.385:0.278639,0.278639:0.0,3.35055e-08,1.0
+chr1	6041922	.	TTGGTTTGGTTTGGTTTGGT	TTGGTTTGGTTTGGTTTGGTTTGGT	.	.	END=6041941;RU=ttggt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999293:5,5:3-5,3-5:13,22,0,6:5,13:2,1|4,4|5,1:295.978:366.612,131.36:0.863148,0.863148:0.0,6.90972e-05,0.999933	0/0:34:1.0:4,4:4-4,4-4:19,10,0,5:4,19:2,4|3,1:200.289:326.675,113.385:0.0,0.0:0.0,7.07621e-06,0.999994
+chr1	6041960	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=6041977;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999493:3,3:3-3,3-3:14,20,0,0:3,14:NULL:236.201:366.612,131.36:0.0,0.0:0.0,0.000392877,0.999607	0/0:27:1.0:3,3:3-3,3-3:23,4,0,0:3,23:NULL:128.968:326.675,113.385:0.0,0.0:0.0,5.73006e-07,1.0
+chr1	6042004	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	.	END=6042038;RU=tttgt;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.161982:7,7:4-7,4-7:2,15,0,0:7,2:NULL:150.298:366.612,131.36:1.38953,1.38953:8.51861e-07,0.69187,0.308144	0/0:34:1.0:7,7:7-7,7-7:19,8,0,7:7,19:2,1|3,1|4,2|5,1|6,1|7,1:201.051:326.675,113.385:0.0,0.0:0.0,4.35751e-06,0.999995
+chr1	6048614	.	AAACAAACAAAC	.	.	.	END=6048625;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:38,7,0,2:3,38:2,2:231.003:366.612,131.36:0.0,0.0:0.0,1.21015e-11,1.0	0/0:27:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:154.817:326.675,113.385:0.0,0.0:0.0,2.35957e-05,0.999979
+chr1	6051144	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=6051171;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.978832:9,9:9-9,9-9:9,9,0,2:9,9:2,1|8,1:134.067:366.612,131.36:0.0,0.0:7e-45,0.00358442,0.996428	0/0:40:1.0:7,7:7-8,7-8:26,7,0,6:7,26:4,1|6,5:217.953:326.675,113.385:0.21692,0.21692:0.0,3.26809e-08,1.0
+chr1	6056382	.	CCTCCTCCTCCTCCT	.	.	.	END=6056396;RU=cct;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998765:5,5:5-5,5-5:13,23,0,0:5,13:NULL:259.972:366.612,131.36:0.0,0.0:3.85917e-38,0.00100599,0.998998	0/0:27:0.98372:5,5:5-5,5-5:10,17,0,0:5,10:NULL:192.524:326.675,113.385:0.0,0.0:3.52835e-29,0.0132492,0.986779
+chr1	6056414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6056441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.990886:7,7:7-7,7-7:10,17,0,2:7,10:5,2:214.125:366.612,131.36:0.0,0.0:6.78826e-30,0.00684723,0.993167	0/0:38:0.997307:7,7:7-7,7-7:11,14,0,13:7,11:3,3|4,1|5,3|6,6:268.22:326.675,113.385:0.0,0.0:5.31752e-33,0.00134459,0.998662
+chr1	6059464	.	AAAAACAAAAACAAAAAC	.	.	.	END=6059481;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:33,25,0,0:3,33:NULL:365.524:366.612,131.36:0.0,0.0:0.0,3.01269e-09,1.0	0/0:44:1.0:3,3:3-3,3-3:28,16,0,0:3,28:NULL:260.005:326.675,113.385:0.0,0.0:0.0,5.9262e-08,1.0
+chr1	6059973	.	AAATAAATAAAT	.	.	.	END=6059984;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:23,21,0,2:3,23:2,2:303.124:366.612,131.36:0.0,0.0:0.0,3.97391e-07,1.0	0/0:24:0.999999:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.651:326.675,113.385:0.0,0.0:0.0,1.0502e-05,0.999993
+chr1	6061243	.	AGAGAGAGAGAG	AGAGAGAG	.	.	END=6061254;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:1.0:4,4:4-4,4-4:20,0,0,0:4,20:NULL:77.6389:366.612,131.36:0.0,0.0:1.0,3.85916e-06,0.0	0/0:44:1.0:6,6:4-6,4-6:26,14,0,3:6,26:5,3:249.986:326.675,113.385:0.339533,0.339533:0.0,6.44112e-08,1.0
+chr1	6062647	.	GTGGGTGGGTGG	.	.	.	END=6062658;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:19,28,0,2:3,19:2,2:337.593:366.612,131.36:0.0,0.0:0.0,6.14054e-06,0.999995	0/0:35:0.997682:3,3:3-3,3-3:12,23,0,0:3,12:NULL:249.551:326.675,113.385:0.0,0.0:5.23451e-40,0.00149923,0.998505
+chr1	6062751	.	TAAATAAATAAA	.	.	.	END=6062762;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999991:3,3:3-3,3-3:18,10,0,0:3,18:NULL:161.93:366.612,131.36:0.0,0.0:0.0,1.2184e-05,0.999987	0/0:16:0.997745:3,3:3-3,3-3:12,4,0,0:3,12:NULL:82.2321:326.675,113.385:0.0,0.0:9.1662e-41,0.00103777,0.998967
+chr1	6066036	.	CTCTGTCTCTGTCTCTGT	CTCTGTCTCTGT	.	.	END=6066053;RU=ctctgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.99997:2,2:2-2,2-2:17,12,0,0:2,17:NULL:176.013:366.612,131.36:0.0,0.0:0.999979,2.31339e-05,5.9961e-40	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.554:326.675,113.385:0.0,0.0:0.0,2.05396e-07,1.0
+chr1	6072915	.	AATAATAATAATAATAATAATAATAATAATAATAATAAT	AATAATAATAATAATAATAATAATAAT,AATAATAATAATAATAATAATAATAATAAT	.	.	END=6072953;RU=aat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:4:0.0671286:9,10:5-11,5-11:0,2,0,2:NULL:8,2:35.2296:366.612,131.36:1.43267,1.53245:1.0,0.0,0.0	0/0:24:0.930029:13,13:12-14,12-14:8,9,0,5:13,8:4,1|5,1|6,2|7,1:152.319:326.675,113.385:0.53502,0.53502:5.64677e-12,0.0433137,0.956757
+chr1	6077184	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6077227;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.892419:24,25:20-24,20-25:7,13,0,0:24,5|25,2:NULL:158.487:366.612,131.36:1.70567,2.21109:5.40504e-17,0.00942569,0.990596	0/0:21:0.755053:22,22:18-22,18-22:6,5,0,8:22,6:6,1|14,2|15,1|17,2|18,1|21,1:133.559:326.675,113.385:1.92222,1.92222:5.48777e-09,0.0867559,0.913343
+chr1	6080857	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=6080876;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999992:4,4:4-4,4-4:18,14,0,3:4,18:2,1|3,2:220.417:366.612,131.36:0.0,0.0:0.999987,1.36199e-05,1.52107e-38	0/0:21:0.976075:5,5:5-5,5-5:8,5,0,8:5,8:2,1|3,2|4,5:135.037:326.675,113.385:0.0,0.0:7.29175e-27,0.00865998,0.991359
+chr1	6083873	.	AATAAATAAATA	AATAAATA	.	.	END=6083884;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:32:0.774856:2,3:2-2,2-3:20,10,0,2:2,18|3,2:2,2:202.804:366.612,131.36:0.0,0.497026:0.225216,0.774819,1.263e-42	0/0:28:0.994711:3,3:3-3,3-3:10,16,0,2:3,10:2,1|3,1:207.602:326.675,113.385:0.0,0.0:3.33485e-40,0.00209673,0.997912
+chr1	6084220	.	ATTTATTTATTT	ATTT	.	.	END=6084231;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.138181:1,1:1-1,1-1:0,15,0,0:NULL:NULL:149.469:366.612,131.36:0.0,0.0:0.260032,0.543367,0.196608	0/0:19:0.998322:3,3:3-3,3-3:13,6,0,0:3,13:NULL:109.814:326.675,113.385:0.0,0.0:1.01883e-32,0.000871197,0.999134
+chr1	6085465	.	TAATAATAATAATAA	TAATAATAATAA	.	.	END=6085479;RU=taa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.98907:4,4:4-4,4-4:10,6,0,0:4,10:NULL:93.322:366.612,131.36:0.0,0.0:0.995439,0.00457339,2.73967e-23	0/0:18:0.996344:5,5:5-5,5-5:12,6,0,0:5,12:NULL:103.466:326.675,113.385:0.0,0.0:8.40892e-32,0.00230582,0.997701
+chr1	6085756	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6085801;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.750683:17,17:16-17,16-17:8,12,0,5:16,2|17,6:7,1|14,2|16,1|17,1:195.426:366.612,131.36:0.35561,0.35561:1.0,0.0,0.0	0/0:29:0.811173:23,23:23-23,23-23:6,13,0,10:23,6:5,1|8,2|10,1|11,2|14,1|19,1|22,2:226.27:326.675,113.385:0.0,0.0:6.11263e-08,0.0622423,0.937851
+chr1	6086268	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6086299;RU=tc;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0130102:23,23:1-23,1-23:0,5,0,2:NULL:15,1|21,1:63.6069:366.612,131.36:8.93866,8.93866:1.83284e-08,0.60832,0.391743	0/0:17:0.86262:16,16:16-16,16-16:6,6,0,5:16,6:4,1|5,1|14,1|15,1|16,1:123.14:326.675,113.385:0.0,0.0:4.58227e-17,0.0297807,0.970274
+chr1	6087008	.	TATTTATTTATT	.	.	.	END=6087019;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998042:3,3:3-3,3-3:12,9,0,0:3,12:NULL:131.045:366.612,131.36:0.0,0.0:2.22887e-39,0.00113631,0.998868	0/0:18:0.999661:3,3:3-3,3-3:15,3,0,0:3,15:NULL:85.7931:326.675,113.385:0.0,0.0:0.0,0.000154233,0.999849
+chr1	6092499	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6092524;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.997822:16,16:15-16,15-16:18,14,0,3:15,2|16,16:7,1|9,1|11,1:246.975:366.612,131.36:0.258566,0.258566:0.0,2.54159e-05,0.999978	0/0:34:0.999858:13,13:13-13,13-13:17,10,0,6:13,17:6,1|7,1|10,2|11,1|13,1:210.266:326.675,113.385:0.19802,0.19802:4.57521e-30,4.70373e-05,0.999955
+chr1	6093013	.	CACACACACACACA	.	.	.	END=6093026;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.396531:7,7:5-7,5-7:3,10,0,0:7,3:NULL:100.647:366.612,131.36:0.404368,0.404368:7.27447e-05,0.406649,0.593349	0/0:14:0.421024:7,7:5-7,5-7:3,9,0,2:7,3:5,2:109.583:326.675,113.385:0.575281,0.575281:6.83108e-05,0.324228,0.675718
+chr1	6098593	.	CTAGAACTAGAACTAGAA	.	.	.	END=6098610;RU=ctagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:172.134:366.612,131.36:0.0,0.0:0.0,1.78548e-05,0.999986	0/0:25:0.999799:3,3:3-3,3-3:15,8,0,2:3,15:2,2:146.151:326.675,113.385:0.0,0.0:0.0,9.13691e-05,0.99991
+chr1	6099223	.	TTGGTTGGTTGG	.	.	.	END=6099234;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.623441:3,3:3-3,3-3:4,2,0,0:3,4:NULL:32.203:366.612,131.36:0.0,0.0:1.71507e-13,0.160163,0.839912	0/0:31:0.999602:3,3:1-3,1-3:15,15,0,0:3,15:NULL:196.668:326.675,113.385:0.913899,0.913899:0.0,0.000276285,0.999727
+chr1	6099488	.	CCCACCCACCCA	.	.	.	END=6099499;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:182.584:366.612,131.36:0.0,0.0:0.0,1.09776e-06,1.0	0/0:31:0.999984:3,3:3-3,3-3:18,13,0,0:3,18:NULL:188.538:326.675,113.385:0.0,0.0:0.0,2.42689e-05,0.999978
+chr1	6099665	.	TTGTTTGTTTGTTTGTTTGTTTGT	TTGTTTGTTTGTTTGTTTGTTTGTTTGT	.	.	END=6099688;RU=ttgt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0649898:7,7:4-7,4-7:0,15,0,5:NULL:4,3|5,1|6,1:172.593:366.612,131.36:0.866209,0.866209:8.74432e-09,0.541024,0.459089	0/0:44:1.0:6,6:6-6,6-6:23,16,0,5:6,23:2,1|3,2|4,1|5,1:276.875:326.675,113.385:0.0,0.0:0.0,1.05494e-06,1.0
+chr1	6102505	.	CAACAACAACAA	.	.	.	END=6102516;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999901:4,4:4-4,4-4:17,12,0,0:4,17:NULL:173.782:366.612,131.36:0.0,0.0:0.0,7.15075e-05,0.999932	0/0:36:0.999977:4,4:4-4,4-4:18,18,0,0:4,18:NULL:228.586:326.675,113.385:0.0,0.0:0.0,3.11281e-05,0.999971
+chr1	6107421	.	AAATAAATAAAT	.	.	.	END=6107432;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:130.232:366.612,131.36:0.0,0.0:0.0,5.2435e-06,0.999995	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.826:326.675,113.385:0.0,0.0:0.0,4.03319e-06,0.999995
+chr1	6108219	.	CACACACACACACACACACACACACACACACACACACA	CA	.	.	END=6108256;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:61:0.993249:19,19:19-20,19-20:25,18,0,18:17,2|19,20|20,3:4,2|5,3|7,1|8,1|9,1|10,1|11,3|13,1|14,2|15,2|18,1:429.764:326.675,113.385:0.29703,0.29703:1.847e-21,6.9518e-05,0.999933
+chr1	6108461	.	AGAGAGAGAGAGAGAG	AG	.	.	END=6108476;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.99941:8,8:8-8,8-8:15,10,0,0:8,15:NULL:150.292:326.675,113.385:0.139319,0.139319:3.98759e-33,0.000372694,0.999629
+chr1	6109390	.	CACCCACCCACC	CACCCACCCACCCACC	.	.	END=6109401;RU=cacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:21:0.0564412:3,4:2-6,2-6:0,21,0,0:NULL:NULL:186.57:366.612,131.36:0.979147,0.985832:0.0502075,0.369433,0.580497	0/0:38:1.0:3,3:2-3,2-3:24,13,0,0:3,24:NULL:212.488:326.675,113.385:0.298675,0.298675:0.0,4.71475e-07,1.0
+chr1	6109799	.	AAATAAATAAAT	AAATAAAT	.	.	END=6109810;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0229253:2,2:1-4,1-4:0,8,0,0:NULL:NULL:79.1816:366.612,131.36:0.723518,0.723518:0.0860922,0.471438,0.442637	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.156:326.675,113.385:0.0,0.0:0.0,1.66408e-07,1.0
+chr1	6109840	.	CAACAACAACAA	CAACAA	.	.	END=6109851;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0171646:2,2:1-3,1-3:0,10,0,0:NULL:NULL:95.4701:366.612,131.36:0.673267,0.673267:0.125553,0.493881,0.380755	0/0:28:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:156.084:326.675,113.385:0.0,0.0:0.0,7.19318e-06,0.999994
+chr1	6110101	.	AAATAAATAAAT	AAAT	.	.	END=6110112;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.114961:1,1:1-3,1-3:0,29,0,0:NULL:NULL:273.872:366.612,131.36:0.984041,0.984041:0.305634,0.506291,0.188084	0/0:19:0.999394:3,3:3-3,3-3:14,5,0,0:3,14:NULL:97.881:326.675,113.385:0.0,0.0:8.52e-43,0.000282072,0.99972
+chr1	6114158	.	AATAAATAAATA	.	.	.	END=6114169;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.808815:3,3:3-3,3-3:5,8,0,0:3,5:NULL:94.8619:366.612,131.36:0.0,0.0:1.67371e-12,0.0870317,0.913069	0/0:12:0.767742:3,3:3-3,3-3:5,7,0,0:3,5:NULL:81.3956:326.675,113.385:0.0,0.0:3.77461e-12,0.127857,0.872242
+chr1	6118166	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6118197;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999744:24,24:22-24,22-24:16,10,0,15:24,16:6,2|7,2|8,1|9,1|12,1|14,1|17,2|19,1|20,1|21,1|23,1|24,1:287.608:366.612,131.36:0.507951,0.507951:0.0,0.0,1.0	0/0:32:0.98645:16,16:16-17,16-17:10,9,0,12:16,10:5,1|6,2|9,1|10,3|12,1|13,1|14,3:227.308:326.675,113.385:0.345543,0.345543:5.24999e-15,0.00639446,0.993618
+chr1	6118512	.	TTCAATTCAATTCAATTCAA	TTCAATTCAATTCAATTCAATTCAA	.	.	END=6118531;RU=ttcaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999993:5,5:5-5,5-5:19,13,0,5:5,19:3,1|4,4:231.825:366.612,131.36:0.0,0.0:0.0,1.00077e-06,1.0	0/0:31:0.99998:4,4:4-4,4-4:18,9,0,4:4,18:3,4:184.02:326.675,113.385:0.0,0.0:0.0,1.38592e-05,0.999987
+chr1	6122082	.	AAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=6122096;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.994947:5,5:5-5,5-5:11,13,0,0:5,11:NULL:162.863:366.612,131.36:0.0,0.0:0.0,0.00154822,0.998458	0/0:33:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:207.671:326.675,113.385:0.0,0.0:0.0,1.27218e-05,0.999987
+chr1	6124347	.	TAAATAAATAAATAAATAAA	TAAA,TAAATAAA	.	.	END=6124366;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0780755:1,2:1-5,1-5:0,20,0,0:NULL:NULL:195.895:366.612,131.36:1.2691,1.27057:0.497749,0.429319,0.072985	0/0:27:1.00001:5,5:5-5,5-5:22,5,0,0:5,22:NULL:138.504:326.675,113.385:0.0,0.0:0.0,1.54925e-06,1.0
+chr1	6126323	.	AATCAATCAATCAATCAATCAATCAATCAATC	AATCAATCAATCAATCAATCAATC	.	.	END=6126354;RU=aatc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.997795:6,6:6-6,6-6:13,14,0,3:6,13:3,3:197.893:366.612,131.36:0.0,0.0:0.999574,0.00043049,1.30887e-36	0/0:25:0.999059:8,8:8-8,8-8:13,5,0,7:8,13:2,1|4,1|5,1|6,2|7,2:152.492:326.675,113.385:0.0,0.0:1.43201e-31,0.000422655,0.999582
+chr1	6130083	.	AAATCAAATCAAATC	.	.	.	END=6130097;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.998496:3,3:3-3,3-3:13,18,0,0:3,13:NULL:224.981:366.612,131.36:0.0,0.0:7.4e-44,0.00115319,0.998853	0/0:23:0.999472:3,3:3-3,3-3:14,9,0,0:3,14:NULL:144.783:326.675,113.385:0.0,0.0:0.0,0.000341248,0.99966
+chr1	6131636	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=6131675;RU=atag;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:10:0.704011:10,10:10-10,10-10:5,5,0,0:10,5:NULL:66.1764:366.612,131.36:0.29703,0.29703:3.54997e-12,0.179667,0.820398	0/0:25:0.984166:10,10:10-10,10-10:9,8,0,8:10,9:2,1|4,1|5,1|7,1|8,1|9,3:173.745:326.675,113.385:0.0,0.0:5.2531e-22,0.00554703,0.994467
+chr1	6132801	.	TTGGTTGGTTGGTTGG	.	.	.	END=6132816;RU=ttgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.948458:4,4:4-4,4-4:8,16,0,0:4,8:NULL:178.262:366.612,131.36:0.0,0.0:5.35741e-27,0.0393248,0.960742	0/0:37:0.999998:4,4:4-4,4-4:18,14,0,5:4,18:2,1|3,4:230.985:326.675,113.385:0.0,0.0:0.0,1.08062e-05,0.999993
+chr1	6133624	.	AAATAAATAAAT	.	.	.	END=6133635;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.962477:3,3:3-3,3-3:8,10,0,0:3,8:NULL:121.6:366.612,131.36:0.0,0.0:2.95185e-25,0.0196238,0.980413	0/0:16:0.994882:3,3:3-3,3-3:11,5,0,0:3,11:NULL:92.3692:326.675,113.385:0.0,0.0:1.38372e-34,0.002219,0.99779
+chr1	6134579	.	AAATAAAATAAAATA	.	.	.	END=6134593;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.993759:3,3:3-3,3-3:11,14,0,0:3,11:NULL:174.422:366.612,131.36:0.0,0.0:1.87619e-36,0.00370717,0.996301	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:177.07:326.675,113.385:0.0,0.0:0.0,4.22136e-06,0.999995
+chr1	6134731	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6134782;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0170447:23,23:1-24,1-24:0,13,0,6:NULL:7,2|12,2|19,1|23,1:173.358:366.612,131.36:7.47154,7.47154:0.845741,0.152508,0.0018332	0/0:33:0.429794:26,26:25-26,25-26:6,18,0,9:25,2|26,4:5,1|6,1|7,1|11,1|12,1|15,1|21,1|26,2:270.245:326.675,113.385:0.472558,0.472558:8.09277e-19,0.522431,0.47766
+chr1	6136631	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6136660;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.482195:20,20:16-20,16-20:4,14,0,0:20,4:NULL:151.317:366.612,131.36:0.913899,0.913899:0.0,0.0,1.0	0/0:48:0.636075:15,15:14-16,14-16:25,16,0,7:13,2|14,6|15,14|16,3:5,1|6,1|8,1|11,1|14,3:338.333:326.675,113.385:0.673122,0.673122:3.52494e-13,0.351759,0.648281
+chr1	6137129	.	TATTATTATTAT	.	.	.	END=6137140;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:26,12,0,0:4,26:NULL:216.068:366.612,131.36:0.0,0.0:0.0,1.37565e-07,1.0	0/0:22:0.999578:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.607:326.675,113.385:0.0,0.0:1.757e-41,0.000238084,0.999765
+chr1	6137380	.	TTGTTTGTTTGT	TTGT	.	.	END=6137391;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.138668:1,1:1-2,1-2:0,23,0,0:NULL:NULL:210.404:366.612,131.36:0.323567,0.323567:0.373728,0.491082,0.135269	0/0:37:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:183.108:326.675,113.385:0.0,0.0:0.0,8.06194e-09,1.0
+chr1	6137986	.	TGCATGCATGCA	.	.	.	END=6137997;RU=tgca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:281.014:366.612,131.36:0.0,0.0:0.0,3.39933e-07,1.0	0/0:18:0.994469:3,3:3-3,3-3:11,7,0,0:3,11:NULL:116.139:326.675,113.385:0.0,0.0:7.27824e-38,0.00322665,0.996784
+chr1	6142183	.	AAACAAACAAACAAAC	AAACAAACAAAC	.	.	END=6142198;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.968282:3,3:3-3,3-3:8,12,0,0:3,8:NULL:141.244:366.612,131.36:0.0,0.0:0.98703,0.0129976,3.1702e-24	0/0:42:1.00001:4,4:4-4,4-4:23,17,0,2:4,23:3,2:263.53:326.675,113.385:0.0,0.0:0.0,9.19229e-07,1.0
+chr1	6144901	.	GAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=6144922;RU=ga;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.983341:8,8:7-8,7-8:10,0,0,0:8,10:NULL:40.7144:366.612,131.36:0.236383,0.236383:0.997944,0.00205975,2.92473e-22	0/0:43:0.999973:11,11:11-11,11-11:25,13,0,4:10,2|11,23:6,1|7,1|10,2:261.614:326.675,113.385:0.0,0.0:1.5765e-36,3.36838e-05,0.99997
+chr1	6153283	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=6153306;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.965536:6,6:6-6,6-6:9,15,0,0:6,9:NULL:174.808:366.612,131.36:0.0,0.0:2.75578e-29,0.0260199,0.974032	0/0:25:0.999981:6,6:6-6,6-6:18,5,0,2:6,18:4,1|5,1:133.222:326.675,113.385:0.0,0.0:0.0,1.21902e-05,0.999987
+chr1	6153696	.	AACTAACTAACT	.	.	.	END=6153707;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999994:3,3:3-3,3-3:19,11,0,0:3,19:NULL:177.198:366.612,131.36:0.0,0.0:0.0,1.20556e-05,0.999987	0/0:14:0.989695:3,3:3-3,3-3:10,4,0,0:3,10:NULL:76.5681:326.675,113.385:0.0,0.0:1.32747e-32,0.00489523,0.995116
+chr1	6156105	.	GGTGGTGGTGGT	.	.	.	END=6156116;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999945:4,4:4-4,4-4:18,13,0,0:4,18:NULL:194.984:366.612,131.36:0.0,0.0:0.0,3.71032e-05,0.999964	0/0:43:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:245.438:326.675,113.385:0.0,0.0:0.0,4.38061e-08,1.0
+chr1	6156235	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=6156254;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999629:6,6:6-6,6-6:14,23,0,4:6,14:2,1|3,1|4,1|5,1:299.189:366.612,131.36:0.0,0.0:0.0,0.00013068,0.999872	0/0:27:0.947843:5,5:5-5,5-5:9,18,0,0:5,9:NULL:205.243:326.675,113.385:0.0,0.0:1.78488e-25,0.0429236,0.957147
+chr1	6157851	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6157890;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.620061:24,25:24-24,24-25:7,8,0,6:24,7:4,1|6,1|9,1|13,1|21,1|25,1:166.354:366.612,131.36:0.0,0.525965:0.0,0.0,1.0	0/0:27:0.752279:20,20:17-20,17-20:12,9,0,5:17,2|20,10:4,1|10,1|11,1|17,1|20,1:183.179:326.675,113.385:1.30783,1.30783:1.61306e-21,0.24328,0.756734
+chr1	6158692	.	AGCAGCAGCAGC	.	.	.	END=6158703;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:30,19,0,0:4,30:NULL:296.539:366.612,131.36:0.0,0.0:0.0,1.30628e-08,1.0	0/0:45:1.0:4,4:4-4,4-4:26,19,0,0:4,26:NULL:279.647:326.675,113.385:0.0,0.0:0.0,1.50567e-07,1.0
+chr1	6158961	.	GTGGTGGTGGTG	.	.	.	END=6158972;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:31,17,0,0:4,31:NULL:274.702:366.612,131.36:0.0,0.0:0.0,4.15691e-09,1.0	0/0:53:1.0:4,4:4-4,4-4:30,21,0,2:4,30:3,2:321.545:326.675,113.385:0.0,0.0:0.0,4.70615e-09,1.0
+chr1	6160096	.	TACATACATACA	.	.	.	END=6160107;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:22,17,0,2:3,22:2,2:257.513:366.612,131.36:0.0,0.0:0.0,1.07318e-06,1.0	0/0:40:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:231.279:326.675,113.385:0.0,0.0:0.0,9.43314e-08,1.0
+chr1	6160598	.	AATAAATAAATA	.	.	.	END=6160609;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999995:3,3:2-3,2-3:19,21,0,0:3,19:NULL:274.628:366.612,131.36:0.323567,0.323567:0.0,1.31913e-05,0.999987	0/0:39:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:225.602:326.675,113.385:0.0,0.0:0.0,3.47456e-07,1.0
+chr1	6162049	.	CCACCACCACCA	.	.	.	END=6162060;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:10:0.988354:4,4:4-4,4-4:10,0,0,0:4,10:NULL:39.0933:366.612,131.36:0.0,0.0:3.00169e-25,0.00586113,0.994152	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:177.09:326.675,113.385:0.0,0.0:0.0,7.64484e-06,0.999994
+chr1	6163104	.	TTTGTTTGTTTG	.	.	.	END=6163115;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:220.902:366.612,131.36:0.0,0.0:0.0,8.27155e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:262.632:326.675,113.385:0.0,0.0:0.0,2.08384e-07,1.0
+chr1	6178405	.	ATAAAATAAAATAAA	.	.	.	END=6178419;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-4,3-4:21,15,0,0:3,21:NULL:219.077:366.612,131.36:0.236383,0.236383:0.0,3.03743e-06,1.0	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:229.543:326.675,113.385:0.0,0.0:0.0,4.18841e-07,1.0
+chr1	6178663	.	GACCTGACCTGACCT	.	.	.	END=6178677;RU=gacct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:28,32,0,0:3,28:NULL:404.545:366.612,131.36:0.0,0.0:0.0,2.97062e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:25,6,0,3:3,25:2,3:175.922:326.675,113.385:0.0,0.0:0.0,1.12569e-07,1.0
+chr1	6180765	.	TAAATAAATAAA	.	.	.	END=6180776;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999829:3,3:3-3,3-3:15,17,0,0:3,15:NULL:211.521:366.612,131.36:0.0,0.0:0.0,0.000125374,0.999879	0/0:14:0.936818:3,3:3-3,3-3:7,5,0,2:3,7:2,2:84.2429:326.675,113.385:0.0,0.0:5.72889e-23,0.0212536,0.978789
+chr1	6188010	.	TTTAATTTAATTTAA	.	.	.	END=6188024;RU=tttaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.838321:3,3:3-3,3-3:6,15,0,0:3,6:NULL:164.825:366.612,131.36:0.0,0.0:1.6313e-19,0.108224,0.891874	0/0:22:0.999711:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.999:326.675,113.385:0.0,0.0:0.0,0.000179156,0.999825
+chr1	6190661	.	AAATAAATAAAT	.	.	.	END=6190672;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:238.529:366.612,131.36:0.0,0.0:0.0,3.31534e-06,1.0	0/0:34:0.999996:3,3:3-3,3-3:19,15,0,0:3,19:NULL:211.052:326.675,113.385:0.0,0.0:0.0,1.27372e-05,0.999987
+chr1	6191823	.	AACAAACAAACA	.	.	.	END=6191834;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.00001:3,3:3-3,3-3:22,24,0,4:3,22:2,4:329.783:366.612,131.36:0.0,0.0:0.0,5.95576e-07,1.0	0/0:31:0.999944:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.552:326.675,113.385:0.0,0.0:0.0,3.98189e-05,0.999963
+chr1	6193268	.	CAACAACAACAACAA	.	.	.	END=6193282;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:5,5:5-5,5-5:26,23,0,0:5,26:NULL:318.943:366.612,131.36:0.0990099,0.0990099:0.0,2.14392e-07,1.0	0/0:34:0.999998:5,5:5-5,5-5:18,13,0,3:5,18:4,3:208.346:326.675,113.385:0.0,0.0:0.0,1.1307e-05,0.999993
+chr1	6194222	.	AACAAAAACAAAAACAAAAACAAA	AACAAAAACAAAAACAAA	.	.	END=6194245;RU=aacaaa;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:217.53:366.612,131.36:0.0,0.0:1.0,2.13012e-06,0.0	0/0:40:1.0:4,4:3-4,3-4:24,8,0,7:4,24:2,1|3,6:217.741:326.675,113.385:0.253975,0.253975:0.0,1.443e-07,1.0
+chr1	6196714	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6196751;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.596831:21,22:20-21,20-22:14,10,0,18:20,4|21,7|22,3:5,1|6,2|8,2|9,1|10,1|11,4|12,1|15,4|16,1|19,1:308.486:366.612,131.36:0.374147,0.769225:3.65542e-38,7.91182e-05,0.999925	0/0:19:0.816281:19,19:18-19,18-19:9,5,0,5:18,2|19,7:6,2|15,2|17,1:128.555:326.675,113.385:0.311527,0.311527:3.19036e-07,0.158704,0.84137
+chr1	6197125	.	GTTTGTTTGTTTGTTT	GTTTGTTTGTTT	.	.	END=6197140;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:3,3:3-3,3-3:29,25,0,0:3,29:NULL:343.468:366.612,131.36:0.0,0.0:1.0,5.40311e-09,0.0	0/0:40:1.0:4,4:4-4,4-4:20,14,0,6:4,20:2,1|3,5:244.8:326.675,113.385:0.0,0.0:2.10572e-29,4.70157e-06,0.999995
+chr1	6197608	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6197647;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0197949:34,34:15-37,15-37:0,12,0,11:NULL:9,1|12,1|13,2|15,2|19,1|28,1|29,1|30,1|34,1:197.621:366.612,131.36:6.74231,6.74231:3.45815e-30,0.143738,0.856344	0/0:48:0.965823:20,20:19-20,19-20:13,18,0,17:19,2|20,11:5,3|9,2|10,2|11,2|12,1|15,1|16,1|18,3|19,2:365.533:326.675,113.385:0.236383,0.236383:1.13737e-10,0.0318096,0.968249
+chr1	6197805	.	CTGCCTCTGCCTCTGCCT	CTGCCTCTGCCT	.	.	END=6197822;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.0:2,2:2-2,2-2:44,2,0,0:2,44:NULL:191.074:366.612,131.36:0.0,0.0:1.0,2.87214e-13,0.0	0/0:57:1.0:3,3:3-3,3-3:39,18,0,0:3,39:NULL:320.576:326.675,113.385:0.0,0.0:0.0,1.62659e-11,1.0
+chr1	6198434	.	CACACACACACACA	.	.	.	END=6198447;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.997258:7,7:6-7,6-7:13,15,0,0:7,13:NULL:190.885:366.612,131.36:0.236383,0.236383:5.4547e-24,0.0019861,0.998019	0/0:30:1.0:7,7:7-7,7-7:25,5,0,0:7,25:NULL:144.648:326.675,113.385:0.0,0.0:3e-45,2.28277e-07,1.0
+chr1	6199733	.	TTATTTATTTAT	.	.	.	END=6199744;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.99552:3,3:3-3,3-3:12,24,0,0:3,12:NULL:279.333:366.612,131.36:0.0,0.0:1.2305e-39,0.00393815,0.996073	0/0:42:1.0:3,3:3-3,3-3:22,17,0,3:3,22:2,3:268.516:326.675,113.385:0.0,0.0:0.0,8.0634e-07,1.0
+chr1	6203219	.	AAACAAACAAAC	.	.	.	END=6203230;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999833:3,3:3-3,3-3:16,24,0,0:3,16:NULL:278.446:366.612,131.36:0.0,0.0:0.0,0.000147499,0.999856	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:183.432:326.675,113.385:0.0,0.0:0.0,2.854e-06,1.0
+chr1	6207701	.	GTTTGTTTGTTT	.	.	.	END=6207712;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999763:3,3:3-3,3-3:15,11,0,0:3,15:NULL:161.819:366.612,131.36:0.0,0.0:3e-45,0.000127729,0.999873	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.425:326.675,113.385:0.0,0.0:0.0,8.11456e-07,1.0
+chr1	6208513	.	GTTGTTGTTGTT	.	.	.	END=6208524;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:25,12,0,0:4,25:NULL:201.525:366.612,131.36:0.0,0.0:0.0,2.75179e-07,1.0	0/0:28:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:151.135:326.675,113.385:0.0,0.0:0.0,9.37241e-06,0.999993
+chr1	6208671	.	TTATTTTTATTTTTATTT	TTATTT	.	.	END=6208688;RU=ttattt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0737831:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.31:366.612,131.36:0.515232,0.515232:0.232985,0.519698,0.247355	0/0:26:0.99963:3,3:3-3,3-3:14,10,0,2:3,14:2,1|3,1:162.315:326.675,113.385:0.0,0.0:0.0,0.000182714,0.999819
+chr1	6210401	.	TTTGTTTGTTTG	.	.	.	END=6210412;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:188.78:366.612,131.36:0.0,0.0:0.0,1.50332e-06,1.0	0/0:20:0.998483:3,3:3-3,3-3:12,5,0,3:3,12:2,3:116.13:326.675,113.385:0.0,0.0:8.19467e-38,0.000558929,0.999445
+chr1	6219473	.	GTTTGTTTGTTTGTTT	.	.	.	END=6219488;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999952:4,4:4-4,4-4:17,15,0,3:4,17:2,1|3,2:231.814:366.612,131.36:0.0,0.0:0.0,2.74888e-05,0.999972	0/0:38:1.0:4,4:4-4,4-4:21,17,0,0:4,21:NULL:254.168:326.675,113.385:0.0,0.0:0.0,7.24935e-06,0.999994
+chr1	6219491	.	ATTTATTTATTT	.	.	.	END=6219502;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:20,21,0,2:3,20:2,2:293.52:366.612,131.36:0.0,0.0:0.0,2.06476e-06,1.0	0/0:45:1.0:3,3:3-3,3-3:25,17,0,3:3,25:2,3:289.229:326.675,113.385:0.0,0.0:0.0,1.11238e-07,1.0
+chr1	6224070	.	GTGTGTGTGTGT	.	.	.	END=6224081;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:6,6:6-6,6-6:21,13,0,2:6,21:4,1|5,1:220.392:366.612,131.36:0.0,0.0:0.0,3.66464e-06,1.0	0/0:33:1.00001:6,6:6-6,6-6:21,10,0,2:6,21:5,2:185.081:326.675,113.385:0.0,0.0:0.0,1.72515e-06,1.0
+chr1	6226500	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6226537;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0298444:35,35:33-36,33-36:0,9,0,2:NULL:29,1|31,1:100.568:366.612,131.36:0.877118,0.877118:0.0,0.0,1.0	0/0:43:0.997486:19,19:18-19,18-19:24,9,0,7:18,5|19,19:6,1|9,1|12,1|13,1|14,1|15,1|18,1:259.282:326.675,113.385:0.5093,0.5093:7.5948e-22,0.00251275,0.997495
+chr1	6226712	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=6226727;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999816:8,8:8-8,8-8:16,11,0,5:8,16:2,1|4,4:204.676:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:45:1.0:4,4:4-4,4-4:24,16,0,5:4,24:2,1|3,4:275.322:326.675,113.385:0.0,0.0:0.0,1.73189e-07,1.0
+chr1	6227414	.	TTGTTTGTTTGT	.	.	.	END=6227425;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,22,0,0:3,23:NULL:289.964:366.612,131.36:0.0,0.0:0.0,3.1637e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:212.816:326.675,113.385:0.0,0.0:0.0,4.12816e-06,0.999995
+chr1	6228918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6228955;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.953211:14,14:12-14,12-14:25,14,0,2:12,2|13,4|14,17|15,2:11,1|14,1:272.748:366.612,131.36:0.495643,0.495643:1.0,0.0,0.0	0/0:21:0.323881:19,19:19-22,19-22:3,6,0,11:19,3:4,1|6,3|11,2|15,2|16,1|18,2:155.522:326.675,113.385:1.40014,1.40014:0.000263973,0.159522,0.840288
+chr1	6229792	.	CAAAACAAAACAAAACAAAACAAAA	CAAAACAAAACAAAACAAAA	.	.	END=6229816;RU=caaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999971:4,4:4-4,4-4:18,16,0,0:4,18:NULL:223.227:366.612,131.36:0.0,0.0:0.999993,1.01201e-05,0.0	0/0:16:0.959818:5,5:5-5,5-5:8,6,0,2:5,8:2,1|3,1:100.318:326.675,113.385:0.0,0.0:1.16675e-24,0.0229229,0.977121
+chr1	6231061	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6231082;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.0552115:13,13:6-15,6-15:0,24,0,9:NULL:5,2|7,1|8,2|10,1|11,2|13,1:297.205:366.612,131.36:2.34668,2.34668:8.57626e-23,0.273988,0.726012	0/0:40:0.999295:11,11:9-12,9-12:22,10,0,6:11,20|12,2:5,1|6,2|9,1|10,2:232.667:326.675,113.385:0.410145,0.410145:5.22495e-29,2.21999e-06,1.0
+chr1	6232825	.	TTTGTTTGTTTG	TTTGTTTG	.	.	END=6232836;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.00001:2,2:2-2,2-2:18,16,0,2:2,18:2,2:229.027:366.612,131.36:0.0,0.0:0.999993,9.95117e-06,0.0	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.983:326.675,113.385:0.0,0.0:0.0,7.29909e-07,1.0
+chr1	6232863	.	TTTGTTTGTTTG	.	.	.	END=6232874;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:23,24,0,0:3,23:NULL:305.213:366.612,131.36:0.0,0.0:0.0,8.45102e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,8,0,3:3,22:2,3:182.425:326.675,113.385:0.0,0.0:0.0,7.23581e-07,1.0
+chr1	6232977	.	CTGCCTCTGCCTCTGCCT	CTGCCTCTGCCTCTGCCTCTGCCT	.	.	END=6232994;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:4,4:4-4,4-4:25,16,0,0:4,25:NULL:248.419:366.612,131.36:0.0,0.0:0.0,2.33065e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:200.399:326.675,113.385:0.0,0.0:0.0,7.36549e-07,1.0
+chr1	6233703	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6233722;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.995376:4,4:4-4,4-4:12,25,0,2:4,12:2,2:292.579:366.612,131.36:0.0,0.0:1.19963e-32,0.003873,0.996135	0/0:25:0.995233:4,4:4-4,4-4:11,11,0,3:4,11:2,1|3,2:169.752:326.675,113.385:0.0,0.0:3.18555e-30,0.00296114,0.997048
+chr1	6236385	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6236434;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.98567:12,12:12-12,12-12:13,19,0,3:11,2|12,11:9,1|11,2:261.163:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/0:31:0.477729:25,25:24-25,24-25:7,14,0,10:24,2|25,5:7,1|9,1|10,1|11,2|16,1|19,2|23,1|24,1:242.309:326.675,113.385:0.452422,0.452422:2.07637e-05,0.478374,0.521694
+chr1	6238596	.	ATTATTATTATT	ATTATTATTATTATT	.	.	END=6238607;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999236:5,5:4-5,4-5:15,16,0,0:5,15:NULL:213.502:366.612,131.36:0.270063,0.270063:0.0,0.000479854,0.999523	0/0:29:0.999393:4,4:4-4,4-4:15,14,0,0:4,15:NULL:194.976:326.675,113.385:0.0,0.0:2.88657e-37,0.000419021,0.999583
+chr1	6239066	.	TTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=6239077;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.271396:4,4:1-4,1-4:2,10,0,0:4,2:NULL:98.8609:366.612,131.36:0.634282,0.634282:1.00093e-11,0.342876,0.657149	0/0:29:0.999785:3,3:3-3,3-3:15,11,0,3:3,15:2,3:182.834:326.675,113.385:0.0,0.0:1.56924e-40,0.00010514,0.999896
+chr1	6240390	.	GTGCGTGCGTGC	GTGC	.	.	END=6240401;RU=gtgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0746064:1,1:1-4,1-4:0,22,0,0:NULL:NULL:201.478:366.612,131.36:0.92647,0.92647:0.230102,0.516179,0.253757	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:173.043:326.675,113.385:0.0,0.0:0.0,6.06587e-06,0.999994
+chr1	6247906	.	TGTTGTTGTTGTTGT	.	.	.	END=6247920;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.00001:5,5:5-5,5-5:22,25,0,0:5,22:NULL:313.808:366.612,131.36:0.0,0.0:0.0,3.09887e-06,1.0	0/0:38:1.0:5,5:4-5,4-5:24,11,0,2:5,24:3,1|4,1:216.699:326.675,113.385:0.236383,0.236383:0.0,4.22916e-07,1.0
+chr1	6250708	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=6250725;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:6,6:6-6,6-6:22,15,0,4:6,22:4,1|5,3:261.781:366.612,131.36:0.0,0.0:0.0,6.02088e-07,1.0	0/0:26:0.999563:6,6:6-6,6-6:15,9,0,2:6,15:3,1|5,1:161.233:326.675,113.385:0.0,0.0:1.7459e-41,0.000263725,0.999736
+chr1	6250858	.	TATGTATGTATGTATG	.	.	.	END=6250873;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:24,21,0,2:4,24:3,2:303.256:366.612,131.36:0.0,0.0:0.0,3.88591e-07,1.0	0/0:32:0.994009:4,4:3-4,3-4:21,9,0,2:3,2|4,19:3,2:192.209:326.675,113.385:0.419363,0.419363:0.0,0.00601312,0.994001
+chr1	6251852	.	AAATAAATAAAT	.	.	.	END=6251863;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:21,19,0,0:3,21:NULL:250.565:366.612,131.36:0.0,0.0:0.0,4.20457e-06,0.999995	0/0:22:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.405:326.675,113.385:0.0,0.0:0.0,6.98634e-05,0.999933
+chr1	6252245	.	ATATATATATATATAT	ATATATATAT	.	.	END=6252260;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.428225:8,8:6-8,6-8:4,13,0,0:8,4:NULL:133.525:366.612,131.36:0.788482,0.788482:2.39144e-06,0.441308,0.558798	1/1:8:0.0176847:5,5:5-9,5-9:0,5,0,0:NULL:NULL:43.6947:326.675,113.385:1.38875,1.38875:0.375284,0.481424,0.14336
+chr1	6252276	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATAT,ATATATATATATATATATATATATATATATATAT	.	.	END=6252315;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.834081:5,5:3-5,3-5:6,8,0,0:5,6:NULL:95.4925:366.612,131.36:0.945117,0.945117:1.0,0.0,0.0	2/2:7:0.0197936:17,17:1-17,1-17:0,4,0,3:NULL:5,1|8,1|17,1:59.9756:326.675,113.385:5.72911,5.72911:0.76738,0.225041,0.00762246
+chr1	6260354	.	TAAATAAATAAA	.	.	.	END=6260365;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:217.602:366.612,131.36:0.0,0.0:0.0,2.08516e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.565:326.675,113.385:0.0,0.0:0.0,1.0302e-05,0.999993
+chr1	6266174	.	TTGTTTTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTT	.	.	END=6266198;RU=ttgtt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.997192:4,4:4-4,4-4:11,16,0,3:4,11:3,3:209.654:366.612,131.36:0.0,0.0:0.99877,0.00123274,1.72179e-30	0/0:29:0.999863:5,5:5-5,5-5:16,9,0,4:5,16:3,4:176.745:326.675,113.385:0.0,0.0:5.2806e-34,0.00010021,0.999902
+chr1	6267793	.	TGTTTGTTTGTT	.	.	.	END=6267804;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.997751:3,3:3-3,3-3:12,9,0,0:3,12:NULL:130.684:366.612,131.36:0.0,0.0:1.30609e-37,0.00086217,0.999142	0/0:39:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.408:326.675,113.385:0.0,0.0:0.0,2.42279e-06,1.0
+chr1	6269522	.	GTTGTTGTTGTT	.	.	.	END=6269533;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999964:4,4:4-4,4-4:18,7,0,0:4,18:NULL:136.356:366.612,131.36:0.0,0.0:0.0,2.879e-05,0.999972	0/0:39:1.00001:4,4:4-4,4-4:22,15,0,2:4,22:3,2:240.943:326.675,113.385:0.0,0.0:0.0,1.42327e-06,1.0
+chr1	6269576	.	GATAGGATAGGATAG	.	.	.	END=6269590;RU=gatag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:156.249:366.612,131.36:0.0,0.0:0.0,8.75009e-06,0.999994	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:218.717:326.675,113.385:0.0,0.0:0.0,7.19534e-08,1.0
+chr1	6271401	.	TCATCATCATCA	.	.	.	END=6271412;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999995:4,4:4-4,4-4:20,13,0,0:4,20:NULL:199.249:366.612,131.36:0.0,0.0:0.0,1.43347e-05,0.999987	0/0:25:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:121.848:326.675,113.385:0.0,0.0:0.0,7.85478e-06,0.999994
+chr1	6273501	.	TTCATTCATTCA	.	.	.	END=6273512;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.998792:3,3:3-3,3-3:13,0,0,0:3,13:NULL:50.7793:366.612,131.36:0.0,0.0:9.4724e-41,0.000490454,0.999514	0/0:19:0.999431:3,3:3-3,3-3:14,5,0,0:3,14:NULL:101.03:326.675,113.385:0.0,0.0:7.8e-44,0.000273069,0.999728
+chr1	6273618	.	ACCCACCCACCC	.	.	.	END=6273629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.76159:3,3:3-3,3-3:5,2,0,0:3,5:NULL:36.5433:366.612,131.36:0.0,0.0:5.11652e-14,0.0983203,0.901783	0/0:21:0.989861:3,3:3-3,3-3:10,11,0,0:3,10:NULL:134.88:326.675,113.385:0.0,0.0:7.59975e-27,0.00483192,0.995182
+chr1	6274375	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=6274394;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:3,2|4,2:171.617:366.612,131.36:0.0,0.0:0.0,1.3935e-06,1.0	0/0:37:1.0:5,5:5-5,5-5:26,7,0,4:5,26:3,1|4,3:196.057:326.675,113.385:0.0,0.0:0.0,4.63645e-08,1.0
+chr1	6276992	.	ATGATGATGATG	.	.	.	END=6277003;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:4,4:4-4,4-4:18,21,0,0:4,18:NULL:258.046:366.612,131.36:0.0,0.0:0.0,4.97124e-05,0.999949	0/0:33:1.00001:4,4:4-4,4-4:22,11,0,0:4,22:NULL:185.686:326.675,113.385:0.0,0.0:0.0,2.22016e-06,1.0
+chr1	6277038	.	AGCAGCAGCAGC	.	.	.	END=6277049;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999636:4,4:4-4,4-4:15,29,0,0:4,15:NULL:321.087:366.612,131.36:0.0,0.0:0.0,0.00034579,0.999658	0/0:33:1.00001:4,4:4-4,4-4:23,10,0,0:4,23:NULL:184.665:326.675,113.385:0.0,0.0:0.0,1.51151e-06,1.0
+chr1	6285646	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6285691;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.931843:25,26:24-25,25-26:10,12,0,14:24,2|25,5|26,3:12,1|13,1|15,3|16,2|19,2|20,1|22,2|25,2:276.338:366.612,131.36:0.240494,0.459304:3.22746e-34,0.000101141,0.999902	0/0:48:0.742702:23,23:22-24,22-24:14,13,0,20:22,3|23,9|24,2:5,2|6,1|7,1|8,1|9,1|12,1|14,1|15,3|16,1|17,3|18,1|21,1|22,1|23,2:352.699:326.675,113.385:0.561134,0.561134:1.89285e-24,0.0129286,0.987098
+chr1	6290853	.	TCCTTCCTTCCT	.	.	.	END=6290864;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999831:3,3:3-3,3-3:17,16,0,0:3,17:NULL:214.565:366.612,131.36:0.0,0.0:0.0,0.000103485,0.999896	0/0:52:1.0:3,3:3-3,3-3:32,20,0,0:3,32:NULL:317.715:326.675,113.385:0.0,0.0:0.0,4.87576e-09,1.0
+chr1	6293821	.	CTCCCTCCCTCC	.	.	.	END=6293832;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:170.023:366.612,131.36:0.0,0.0:0.0,4.76004e-06,0.999995	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:218.038:326.675,113.385:0.0,0.0:0.0,9.94156e-08,1.0
+chr1	6301879	.	AATAAATAAATA	.	.	.	END=6301890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:268.841:366.612,131.36:0.0,0.0:0.0,2.64398e-07,1.0	0/0:42:1.0:3,3:3-3,3-3:23,17,0,2:3,23:2,2:261.177:326.675,113.385:0.0,0.0:0.0,3.68189e-07,1.0
+chr1	6303590	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6303631;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:44:0.937064:25,25:22-25,22-25:14,11,0,18:24,3|25,11:5,1|9,2|10,1|12,2|13,2|14,3|15,1|16,1|18,1|20,1|21,1|22,1|23,1:316.407:366.612,131.36:0.915721,0.915721:0.0,3.48342e-05,0.999964	0/1:52:0.873441:21,23:21-21,20-23:14,13,0,24:20,3|21,9|22,2:4,1|5,1|6,2|7,1|8,1|9,3|10,1|11,2|13,1|15,3|16,2|18,1|19,1|20,3|23,1:393.598:326.675,113.385:0.0990099,1.0187:1.21109e-14,2.029e-06,1.0
+chr1	6311549	.	GGTGGTGGTGGT	.	.	.	END=6311560;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998851:4,4:4-4,4-4:14,11,0,0:4,14:NULL:160.95:366.612,131.36:0.0,0.0:0.0,0.000681921,0.999323	0/0:25:0.999576:4,4:4-4,4-4:15,10,0,0:4,15:NULL:155.49:326.675,113.385:0.0,0.0:0.0,0.000278707,0.999721
+chr1	6312247	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	.	END=6312294;RU=tccc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.0916072:12,12:11-13,11-13:0,16,0,9:NULL:3,1|4,1|6,1|8,1|9,2|10,1|11,2:209.337:366.612,131.36:0.790097,0.790097:0.120643,0.4686,0.410951	0/0:16:0.519107:12,12:11-12,11-12:4,6,0,5:12,4:3,1|4,2|8,1|10,1:109.704:326.675,113.385:0.486863,0.486863:3.2532e-09,0.268059,0.731941
+chr1	6312789	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6312844;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.30309:31,32:28-33,28-33:2,16,0,17:31,2:6,1|12,2|13,1|14,3|16,2|19,1|20,2|21,1|22,2|26,1|32,1:298.451:366.612,131.36:0.815616,0.844549:0.0,0.0,1.0	0/0:28:0.233564:28,28:25-29,25-29:2,11,0,12:28,2:6,1|7,1|8,1|12,1|13,1|14,1|19,1|21,2|26,1|27,1|28,1:211.077:326.675,113.385:1.44649,1.44649:1.4493e-10,0.228072,0.771956
+chr1	6317256	.	AAAAACAAAAACAAAAAC	.	.	.	END=6317273;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:191.254:366.612,131.36:0.0,0.0:0.0,2.07463e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:29,7,0,0:3,29:NULL:180.098:326.675,113.385:0.0,0.0:0.0,1.09115e-08,1.0
+chr1	6324793	.	TTATTTATTTAT	.	.	.	END=6324804;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:237.826:366.612,131.36:0.0,0.0:0.0,7.68292e-08,1.0	0/0:24:0.999899:3,3:3-3,3-3:16,5,0,3:3,16:2,3:131.718:326.675,113.385:0.0,0.0:0.0,3.49466e-05,0.999964
+chr1	6326106	.	CTGCTGCTGCTG	.	.	.	END=6326117;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:25,18,0,0:4,25:NULL:261.316:366.612,131.36:0.0,0.0:0.0,2.9682e-07,1.0	0/0:32:0.999879:4,4:4-4,4-4:17,15,0,0:4,17:NULL:206.579:326.675,113.385:0.0,0.0:0.0,9.01237e-05,0.999911
+chr1	6328025	.	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	.	.	END=6328108;RU=tccctc;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:24:0.323834:5,14:3-13,11-15:2,10,0,11:5,2:2,1|3,1|4,2|5,1|6,1|10,1|11,1|12,1|13,1|14,1:178.554:366.612,131.36:1.80051,1.17184:8.72804e-09,1.0,2.80873e-36	0/0:19:0.276711:14,14:11-14,11-14:2,7,0,10:14,2:2,1|4,1|5,1|6,1|7,2|9,1|10,1|12,1|13,1:148.089:326.675,113.385:0.927845,0.927845:0.00346715,0.435722,0.560919
+chr1	6329503	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6329524;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999981:11,11:10-12,10-12:19,18,0,5:11,19:4,1|9,1|10,3:279.328:366.612,131.36:0.385249,0.385249:1.54556e-29,1.48909e-05,0.999986	0/0:49:0.355466:11,11:10-11,10-11:20,21,0,7:10,5|11,15:4,1|6,1|8,2|10,2|11,1:344.554:326.675,113.385:0.516562,0.516562:1.06726e-25,0.644578,0.355461
+chr1	6330314	.	TGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6330337;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.717376:21,21:19-21,19-21:6,18,0,13:21,6:8,2|11,1|12,2|13,3|16,2|18,1|19,2:296.872:366.612,131.36:0.481599,0.481599:0.0,0.0,1.0	0/0:37:0.999663:12,12:12-12,12-12:16,15,0,4:12,16:7,2|11,2:241.719:326.675,113.385:0.0,0.0:9.40051e-21,0.000149188,0.99985
+chr1	6332594	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=6332633;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.00001:9,9:9-9,9-9:21,18,0,17:9,21:2,1|3,1|4,4|5,3|6,2|7,2|8,4:375.193:366.612,131.36:0.0,0.0:0.0,1.36888e-07,1.0	0/0:39:0.999945:8,8:8-8,8-8:17,12,0,10:8,17:3,2|4,1|5,3|6,2|7,2:256.922:326.675,113.385:0.0,0.0:0.0,3.51892e-05,0.999964
+chr1	6332921	.	TGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=6332940;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999962:5,5:5-5,5-5:18,17,0,0:5,18:NULL:235.869:366.612,131.36:0.0,0.0:0.0,3.68095e-05,0.999964	0/0:31:1.00001:4,4:4-4,4-4:20,7,0,4:4,20:3,4:174.049:326.675,113.385:0.0,0.0:0.0,2.65643e-06,1.0
+chr1	6341827	.	TTTATTTATTTATTTATTTA	.	.	.	END=6341846;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999931:5,5:5-5,5-5:17,13,0,3:5,17:2,1|3,1|4,1:208.003:366.612,131.36:0.0,0.0:0.0,4.02341e-05,0.999963	0/0:31:0.997836:5,5:5-5,5-5:12,11,0,8:5,12:3,3|4,5:204.514:326.675,113.385:0.0,0.0:6.80122e-33,0.000836161,0.999166
+chr1	6345062	.	TATTATTATTATTATTATTATTATTATTAT	.	.	.	END=6345091;RU=tat;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.583909:10,10:9-10,9-10:10,10,0,4:9,2|10,8:5,1|7,1|8,2:173.1:366.612,131.36:0.492866,0.492866:1.20285e-11,0.412318,0.587755	0/0:21:0.71864:10,10:9-10,9-10:11,7,0,3:9,2|10,9:7,3:136.316:326.675,113.385:0.452422,0.452422:3.92122e-13,0.278474,0.721527
+chr1	6347126	.	ATTTATTTATTT	.	.	.	END=6347137;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:30,30,0,0:3,30:NULL:385.253:366.612,131.36:0.0,0.0:0.0,5.45747e-09,1.0	0/0:30:1.00001:3,3:3-4,3-4:21,8,0,0:3,21:NULL:157.025:326.675,113.385:0.21692,0.21692:0.0,2.56255e-06,1.0
+chr1	6348865	.	TTGTTGTTGTTGTTG	.	.	.	END=6348879;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:5,5:5-5,5-5:20,12,0,2:5,20:4,1|5,1:200.063:366.612,131.36:0.0,0.0:0.0,2.3945e-06,1.0	0/0:41:1.0:5,5:5-5,5-5:27,9,0,5:5,27:4,5:225.486:326.675,113.385:0.0,0.0:0.0,1.41317e-08,1.0
+chr1	6354453	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6354502;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.260449:31,37:28-31,28-38:2,10,0,8:31,2:7,1|8,1|12,1|19,1|28,1|29,1|32,1|36,1:170.006:366.612,131.36:1.55707,3.13366:0.0,0.0,1.0	0/0:37:0.614482:25,25:19-25,19-25:8,17,0,10:24,2|25,6:5,2|6,1|7,1|13,1|17,1|19,1|20,2|22,1:280.44:326.675,113.385:2.29536,2.29536:5.97258e-07,0.33895,0.661073
+chr1	6354954	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6354981;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:35:0.0666914:29,36:23-36,27-37:0,18,0,17:NULL:5,1|7,1|8,1|14,1|16,1|17,1|19,1|22,3|23,1|26,1|27,2|28,1|29,1|36,1:297.47:366.612,131.36:4.02078,3.49958:0.0,0.00311768,0.99689	1/0:24:0.801285:13,14:13-14,14-14:12,8,0,4:13,4|14,8:7,1|8,2|11,1:159.248:326.675,113.385:0.494455,0.0:1.73115e-09,0.801783,0.198264
+chr1	6355000	.	AGGCAGGCAGGC	.	.	.	END=6355011;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:170.882:366.612,131.36:0.0,0.0:0.0,6.52171e-06,0.999994	0/0:32:0.999998:3,3:3-3,3-3:18,11,0,3:3,18:2,3:190.865:326.675,113.385:0.0,0.0:0.0,1.01497e-05,0.999993
+chr1	6357634	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6357691;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.00843527:1,1:1-8,1-8:0,13,0,0:NULL:NULL:117.297:366.612,131.36:2.03936,2.03936:0.854868,0.142426,0.00279405	2/2:23:0.132999:28,28:17-29,17-29:2,8,0,11:28,2:5,1|10,1|11,1|13,3|15,1|17,1|20,1|21,2:172.541:326.675,113.385:5.3983,5.3983:0.748314,0.241926,0.00978573
+chr1	6359367	.	CTGCTGCTGCTG	.	.	.	END=6359378;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:4,4:4-4,4-4:37,27,0,0:4,37:NULL:395.923:366.612,131.36:0.0,0.0:0.0,2.29575e-10,1.0	0/0:61:1.0:4,4:4-4,4-4:39,22,0,0:4,39:NULL:362.516:326.675,113.385:0.0,0.0:0.0,4.16911e-11,1.0
+chr1	6368193	.	CATCATCATCAT	.	.	.	END=6368204;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999976:4,4:4-4,4-4:18,7,0,0:4,18:NULL:145.628:366.612,131.36:0.0,0.0:0.0,3.0766e-05,0.999971	0/0:39:1.0:4,4:4-5,4-5:30,8,0,0:4,30:NULL:188.186:326.675,113.385:0.236383,0.236383:0.0,7.14351e-09,1.0
+chr1	6368347	.	TTTATTTATTTATTTATTTA	TTTA,TTTATTTA	.	.	END=6368366;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:19:0.165475:1,2:1-4,1-4:0,19,0,0:NULL:NULL:196.82:366.612,131.36:0.868696,0.813208:0.728826,0.258439,0.0127586	0/0:30:0.997218:5,5:5-5,5-5:12,18,0,0:5,12:NULL:207.885:326.675,113.385:0.0,0.0:1.13771e-33,0.00223835,0.997768
+chr1	6371007	.	AGGTAGGTAGGT	.	.	.	END=6371018;RU=aggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:27,20,0,3:3,27:2,3:310.643:366.612,131.36:0.0,0.0:0.0,5.70152e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:259.845:326.675,113.385:0.0,0.0:0.0,1.20261e-07,1.0
+chr1	6371335	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=6371382;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.578901:9,9:8-10,8-10:9,13,0,3:8,2|9,7:5,1|6,1|7,1:185.232:366.612,131.36:0.598171,0.598171:1.0,0.0,0.0	2/2:4:0.026833:23,23:21-25,21-25:0,3,0,0:NULL:NULL:31.1618:326.675,113.385:0.859164,0.859164:0.231877,0.505364,0.262804
+chr1	6379206	.	AAACAAACAAAC	.	.	.	END=6379217;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:19,15,0,4:3,19:2,4:244.686:366.612,131.36:0.0,0.0:0.0,6.60564e-06,0.999994	0/0:47:1.0:3,3:3-3,3-3:36,11,0,0:3,36:NULL:244.338:326.675,113.385:0.0,0.0:0.0,7.01717e-11,1.0
+chr1	6379384	.	TGTTTTGTTTTGTTT	.	.	.	END=6379398;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999979:3,3:3-3,3-3:18,13,0,0:3,18:NULL:193.535:366.612,131.36:0.0,0.0:0.0,2.71137e-05,0.999972	0/0:29:1.0:3,3:3-3,3-3:19,7,0,3:3,19:2,3:161.935:326.675,113.385:0.0,0.0:0.0,4.73307e-06,0.999995
+chr1	6386715	.	GCCAGCCAGCCA	.	.	.	END=6386726;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:25,17,0,2:3,25:2,2:277.144:366.612,131.36:0.0,0.0:0.0,7.65198e-08,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:170.238:326.675,113.385:0.0,0.0:0.0,2.20524e-06,1.0
+chr1	6389231	.	TGAGAATGAGAATGAGAA	.	.	.	END=6389248;RU=tgagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:33,16,0,2:3,33:2,2:292.834:366.612,131.36:0.0,0.0:0.0,4.11387e-10,1.0	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:227.167:326.675,113.385:0.0,0.0:0.0,1.66007e-06,1.0
+chr1	6390202	.	TATATATATATATATATATATA	TATATATATATATATATATA	.	.	END=6390223;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.999128:10,10:9-10,9-10:15,11,0,0:10,15:NULL:167.229:366.612,131.36:0.195027,0.195027:0.999789,0.000212479,1.24383e-18	0/0:11:0.886395:11,11:11-11,11-11:7,4,0,0:11,7:NULL:68.6352:326.675,113.385:0.0,0.0:7.10004e-08,0.0573829,0.942704
+chr1	6390677	.	ACATACATACATACATACATACATACATACAT	ACATACATACATACATACATACATACATACATACAT	.	.	END=6390708;RU=acat;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:0.786703:8,9:8-9,9-9:12,20,0,24:8,2|9,10:2,1|3,2|4,3|5,4|6,6|7,3|8,5:412.331:366.612,131.36:0.491073,0.0:0.0,2.75677e-05,0.999972	0/0:40:0.999966:8,8:8-8,8-8:18,16,0,6:8,18:3,2|6,2|7,2:261.855:326.675,113.385:0.0,0.0:2.71797e-36,3.02089e-05,0.999971
+chr1	6391128	.	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG	.	.	.	END=6391159;RU=tctg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:0.99995:8,8:8-8,8-8:17,26,0,11:8,17:2,1|3,1|4,2|5,2|6,2|7,3:385.269:366.612,131.36:0.0,0.0:0.0,3.36673e-05,0.99997	0/0:24:0.998722:8,8:8-8,8-8:13,5,0,6:8,13:2,1|3,3|4,1|6,1:142.657:326.675,113.385:0.0,0.0:3.41302e-38,0.000658743,0.999346
+chr1	6391479	.	CAAACAAACAAA	.	.	.	END=6391490;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:23,25,0,3:3,23:2,3:351.872:366.612,131.36:0.0,0.0:0.0,2.91798e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:213.709:326.675,113.385:0.0,0.0:0.0,4.31277e-07,1.0
+chr1	6394101	.	AAAACAAAACAAAAC	.	.	.	END=6394115;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999747:3,3:3-3,3-3:16,17,0,0:3,16:NULL:215.353:366.612,131.36:0.0,0.0:0.0,0.000173326,0.999827	0/0:29:0.999992:3,3:3-3,3-3:18,9,0,2:3,18:2,2:166.137:326.675,113.385:0.0,0.0:0.0,1.259e-05,0.999987
+chr1	6403250	.	TGTTTGTTTGTT	.	.	.	END=6403261;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.996921:3,3:3-3,3-3:12,9,0,0:3,12:NULL:130.745:366.612,131.36:0.0,0.0:7.23095e-40,0.00189695,0.998109	0/0:23:0.998589:3,3:3-3,3-3:12,8,0,3:3,12:2,3:146.182:326.675,113.385:0.0,0.0:1.93543e-40,0.000508567,0.999493
+chr1	6410410	.	CCACCCCCACCCCCACCC	.	.	.	END=6410427;RU=ccaccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999998:3,3:3-3,3-3:21,28,0,4:3,21:2,4:369.966:366.612,131.36:0.0,0.0:0.0,4.48486e-06,0.999995	0/0:37:0.999862:3,3:3-3,3-3:17,20,0,0:3,17:NULL:262.94:326.675,113.385:0.0,0.0:0.0,0.000146166,0.999857
+chr1	6411672	.	CCACCACCACCA	CCACCACCACCACCA	.	.	END=6411683;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.933194:5,5:5-5,5-5:7,19,0,0:5,7:NULL:196.656:366.612,131.36:0.0,0.0:7.30312e-38,0.0317498,0.968307	0/0:24:0.984921:4,4:4-4,4-4:10,14,0,0:4,10:NULL:168.232:326.675,113.385:0.0,0.0:1.06299e-23,0.0104089,0.989612
+chr1	6412880	.	TATGTATGTATG	.	.	.	END=6412891;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:243.736:366.612,131.36:0.0,0.0:0.0,6.45001e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:151.166:326.675,113.385:0.0,0.0:0.0,2.57264e-07,1.0
+chr1	6415172	.	TATATATATATATATATATATA	TATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA	.	.	END=6415193;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:11:0.231832:12,18:12-18,12-18:2,5,0,2:12,2:6,1|17,1:72.2046:366.612,131.36:1.68794,1.37135:3.04941e-11,0.000441063,0.999561	0/0:9:0.571699:11,11:7-11,7-11:5,3,0,0:11,5:NULL:50.6524:326.675,113.385:1.9881,1.9881:5.17558e-08,0.304474,0.695536
+chr1	6417480	.	AGCTGGAGAAGCTGGAGAAGCTGGAGAAGCTGGAGA	.	.	.	END=6417515;RU=agctggaga;PERIOD=9;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999987:4,4:4-4,4-4:19,20,0,3:4,19:2,1|3,2:285.284:366.612,131.36:0.0,0.0:0.0,2.44925e-05,0.999978	0/0:44:0.999971:4,4:4-4,4-4:18,22,0,4:4,18:2,1|3,3:299.858:326.675,113.385:0.0,0.0:0.0,3.82692e-05,0.999963
+chr1	6419181	.	TTCCTTTCCTTTCCT	.	.	.	END=6419195;RU=ttcct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,18,0,2:3,24:2,2:278.409:366.612,131.36:0.0,0.0:0.0,3.33255e-07,1.0	0/0:69:1.0:3,3:3-3,3-3:57,12,0,0:3,57:NULL:335.583:326.675,113.385:0.0,0.0:0.0,4.64831e-17,1.0
+chr1	6419368	.	TCTCTTTCTCTTTCTCTTTCTCTT	.	.	.	END=6419391;RU=tctctt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999994:4,4:4-4,4-4:20,18,0,0:4,20:NULL:245.529:366.612,131.36:0.139319,0.139319:0.0,1.87967e-05,0.999985	0/0:49:1.0:4,4:4-4,4-4:30,13,0,6:4,30:3,6:283.516:326.675,113.385:0.0,0.0:0.0,2.87679e-09,1.0
+chr1	6419434	.	CTCCTCCTCCTCCTCCTCCTC	CTCCTCCTCCTCCTCCTC	.	.	END=6419454;RU=ctc;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.0:6,6:6-6,6-6:26,18,0,5:6,26:3,2|4,2|5,1:306.28:366.612,131.36:0.0,0.0:1.0,9.48715e-08,0.0	0/0:20:0.997097:7,7:3-7,3-7:13,6,0,0:7,13:NULL:113.007:326.675,113.385:1.92721,1.92721:4.64473e-22,0.00220684,0.997799
+chr1	6424394	.	TTGTTGTTGTTG	.	.	.	END=6424405;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999994:4,4:4-4,4-4:19,12,0,0:4,19:NULL:180.0:366.612,131.36:0.0,0.0:0.0,1.33005e-05,0.999987	0/0:26:0.999895:4,4:4-4,4-4:16,8,0,2:4,16:3,2:149.289:326.675,113.385:0.0,0.0:0.0,5.31242e-05,0.999948
+chr1	6427092	.	ATATATATATATATATATATATATAT	AT	.	.	END=6427117;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0172122:1,1:1-3,1-3:0,11,0,0:NULL:NULL:99.9566:366.612,131.36:0.48807,0.48807:0.560778,0.398671,0.0406984	0/0:12:0.373616:13,13:9-13,9-13:9,1,0,0:12,3|13,6:NULL:55.0636:326.675,113.385:1.49816,1.49816:5.54377e-05,0.610766,0.389242
+chr1	6427177	.	ATTTATTTATTTATTT	ATTTATTT	.	.	END=6427192;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0306123:2,2:1-3,1-3:0,11,0,0:NULL:NULL:101.966:366.612,131.36:0.732539,0.732539:0.248395,0.537449,0.214171	0/0:20:0.981664:4,4:4-4,4-4:9,9,0,2:4,9:3,2:132.02:326.675,113.385:0.0,0.0:7.25624e-25,0.00914487,0.990874
+chr1	6441337	.	GCCGCCGCCGCCGCC	GCCGCCGCCGCC	.	.	END=6441351;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:1.0:4,4:4-4,4-4:32,29,0,0:4,32:NULL:391.05:366.612,131.36:0.0,0.0:1.0,5.48193e-10,0.0	0/0:73:1.0:5,5:5-5,5-5:48,22,0,3:5,48:3,2|4,1:418.21:326.675,113.385:0.0,0.0:0.0,3.65892e-14,1.0
+chr1	6441476	.	GCCGGCCGGCCG	.	.	.	END=6441487;RU=gccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:3,3:3-3,3-3:34,26,0,3:3,34:2,3:391.166:366.612,131.36:0.0,0.0:0.0,2.98874e-10,1.0	0/0:86:1.0:3,3:3-3,3-3:39,39,0,8:3,39:2,8:565.491:326.675,113.385:0.0,0.0:0.0,1.5715e-11,1.0
+chr1	6442029	.	AACAACAACAACAACAACAACAACAACAACAACAAC	AACAACAACAACAACAACAACAACAACAACAACAACAAC	.	.	END=6442064;RU=aac;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.868709:13,13:13-13,13-13:6,18,0,0:13,6:NULL:198.809:366.612,131.36:0.0,0.0:2.86275e-18,0.0676645,0.932431	0/0:42:1.0:12,12:12-12,12-12:19,17,0,6:12,19:4,1|6,1|10,2|11,2:285.658:326.675,113.385:0.0,0.0:0.0,7.73598e-06,0.999994
+chr1	6442239	.	TAAGATTGTAAGATTGTAAGATTG	.	.	.	END=6442262;RU=taagattg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,20,0,0:3,24:NULL:278.112:366.612,131.36:0.0,0.0:0.0,1.08989e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:253.768:326.675,113.385:0.0,0.0:0.0,2.23496e-07,1.0
+chr1	6443834	.	GTTGGTTGGTTG	.	.	.	END=6443845;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:216.65:366.612,131.36:0.0,0.0:0.0,1.78562e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:29,4,0,0:3,29:NULL:154.01:326.675,113.385:0.0,0.0:0.0,7.97915e-09,1.0
+chr1	6444502	.	CTGCTGCTGCTG	.	.	.	END=6444513;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:220.241:366.612,131.36:0.0,0.0:0.0,5.32636e-06,0.999995	0/0:34:0.999896:4,4:4-4,4-4:17,17,0,0:4,17:NULL:221.897:326.675,113.385:0.0,0.0:0.0,8.4194e-05,0.999918
+chr1	6445953	.	TATTTTATTTTATTTTATTTTATTT	TATTTTATTTTATTT	.	.	END=6445977;RU=tattt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.986539:3,3:3-3,3-3:10,5,0,0:3,10:NULL:89.0863:366.612,131.36:0.0,0.0:0.996391,0.00361845,7.5186e-31	0/0:15:0.959768:5,5:5-5,5-5:8,5,0,2:5,8:3,1|4,1:94.2959:326.675,113.385:0.0,0.0:1.15631e-17,0.0226392,0.977405
+chr1	6450086	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6450121;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:15:0.251893:15,33:15-20,19-36:5,7,0,2:15,3|19,2:13,1|33,1:116.95:366.612,131.36:2.13292,6.6362:8.74514e-06,0.971979,0.0280665	2/0:29:0.93274:17,18:17-18,18-18:15,6,0,7:17,6|18,9:4,1|5,1|6,1|7,2|10,1|15,1:190.025:326.675,113.385:0.437216,0.0:1.14586e-09,0.932763,0.0673315
+chr1	6453097	.	TTTGTTTGTTTG	.	.	.	END=6453108;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999862:3,3:3-3,3-3:16,13,0,0:3,16:NULL:180.898:366.612,131.36:0.0,0.0:0.0,0.000100186,0.999903	0/0:32:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:174.755:326.675,113.385:0.0,0.0:0.0,1.27653e-06,1.0
+chr1	6454520	.	ATCATCATCATCATC	.	.	.	END=6454534;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:5,5:5-5,5-5:28,24,0,3:5,28:4,3:348.08:366.612,131.36:0.0,0.0:0.0,1.93185e-08,1.0	0/0:50:1.0:5,5:5-5,5-5:31,16,0,3:5,31:4,3:293.005:326.675,113.385:0.0,0.0:0.0,1.47837e-09,1.0
+chr1	6455399	.	AGAAAAGAAAAGAAA	.	.	.	END=6455413;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996704:3,3:3-3,3-3:11,18,0,0:3,11:NULL:208.198:366.612,131.36:0.0,0.0:5.81437e-37,0.00226207,0.997745	0/0:22:0.997507:3,3:3-3,3-3:12,10,0,0:3,12:NULL:142.479:326.675,113.385:0.0,0.0:1.9739e-40,0.00158037,0.998427
+chr1	6456272	.	ACACACACACACACACACACAC	ACACACACACACACACACACACAC	.	.	END=6456293;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:12,12:12-12,12-12:24,20,0,10:12,24:5,3|9,1|11,6:355.119:366.612,131.36:0.0,0.0:0.0,4.39573e-09,1.0	0/0:54:1.0:11,11:11-11,11-11:21,21,0,11:11,21:4,1|5,1|6,3|7,1|8,2|9,1|10,2:368.916:326.675,113.385:0.0,0.0:4.12443e-30,4.83856e-06,0.999995
+chr1	6456451	.	GTGGTGGTGGTGGTG	.	.	.	END=6456465;RU=gtg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:5,5:5-5,5-5:30,15,0,5:5,30:4,5:290.961:366.612,131.36:0.0,0.0:0.0,1.93579e-09,1.0	0/0:56:1.0:5,5:5-5,5-5:38,13,0,5:5,38:4,5:310.504:326.675,113.385:0.0,0.0:0.0,9.48682e-12,1.0
+chr1	6459379	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6459398;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999802:4,4:4-4,4-4:16,5,0,0:4,16:NULL:110.009:366.612,131.36:0.0,0.0:0.0,0.000120563,0.99988	0/0:23:0.999975:4,4:4-4,4-4:18,5,0,0:4,18:NULL:119.271:326.675,113.385:0.0,0.0:0.0,3.32964e-05,0.99997
+chr1	6461977	.	TTTTCTTTTCTTTTC	.	.	.	END=6461991;RU=ttttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999407:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.461:366.612,131.36:0.0,0.0:0.0,0.000331563,0.999673	0/0:32:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:180.804:326.675,113.385:0.0,0.0:0.0,6.43755e-06,0.999995
+chr1	6467447	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	.	END=6467494;RU=agaa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.865652:12,12:12-12,12-12:5,14,0,7:12,5:5,2|8,2|10,1|11,2:202.893:366.612,131.36:0.0,0.0:7.7543e-13,0.0593063,0.940778	0/0:27:0.718776:12,12:9-12,9-12:6,16,0,5:12,6:3,1|4,2|7,1|10,1:220.248:326.675,113.385:0.574428,0.574428:6.58609e-14,0.254121,0.745886
+chr1	6467698	.	CCCTTCCCTTCCCTT	.	.	.	END=6467712;RU=ccctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:3,3:3-3,3-3:17,19,0,3:3,17:2,3:261.031:366.612,131.36:0.0,0.0:0.0,3.89303e-05,0.999963	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:237.557:326.675,113.385:0.0,0.0:0.0,1.90104e-07,1.0
+chr1	6467732	.	TGTGTGTGTGTGTG	.	.	.	END=6467745;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999988:7,7:6-7,6-7:19,24,0,4:7,19:5,1|6,3:323.777:366.612,131.36:0.169767,0.169767:1.22758e-37,8.88063e-06,0.999994	0/0:45:1.0:7,7:7-7,7-7:26,13,0,5:7,26:6,4|7,1:264.22:326.675,113.385:0.0990099,0.0990099:0.0,2.91863e-08,1.0
+chr1	6470121	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6470162;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:52:0.419116:25,25:24-25,24-25:12,20,0,19:24,4|25,8:6,1|7,1|8,1|9,2|10,1|11,1|13,1|15,1|16,3|17,1|20,1|21,1|22,2|24,2:396.669:366.612,131.36:0.491073,0.491073:0.0,1.55313e-05,0.999986	0/1:71:0.984002:21,22:20-21,20-22:16,24,0,31:20,5|21,9|22,2:4,1|5,2|6,2|8,4|9,3|10,1|11,1|13,4|14,2|15,3|16,1|19,3|20,3|22,1:557.227:326.675,113.385:0.390807,0.725277:3.74851e-13,0.00585111,0.994165
+chr1	6474556	.	TTGTTGTTGTTG	.	.	.	END=6474567;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.00001:4,4:4-4,4-4:22,24,0,0:4,22:NULL:309.116:366.612,131.36:0.0,0.0:0.0,2.64898e-06,1.0	0/0:34:1.0:4,4:4-4,4-4:19,13,0,2:4,19:3,2:211.583:326.675,113.385:0.0,0.0:0.0,8.20497e-06,0.999994
+chr1	6479132	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6479171;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.818742:21,21:18-21,18-21:7,18,0,6:21,7:6,1|7,1|9,1|12,1|18,2:244.382:366.612,131.36:1.43581,1.43581:9.04679e-12,0.0961955,0.903909	0/1:36:0.701656:20,21:19-20,19-21:11,16,0,9:19,3|20,5|21,3:7,2|8,2|9,1|10,1|15,1|18,1|19,1:281.897:326.675,113.385:0.425627,0.791708:2.93234e-06,0.159303,0.84077
+chr1	6481961	.	AATAAATAAATA	.	.	.	END=6481972;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999864:3,3:3-3,3-3:16,8,0,0:3,16:NULL:135.705:366.612,131.36:0.0,0.0:0.0,6.6863e-05,0.999934	0/0:35:0.999832:3,3:3-3,3-3:16,19,0,0:3,16:NULL:233.09:326.675,113.385:0.0,0.0:0.0,0.000120095,0.999881
+chr1	6485320	.	AATTTAATTTAATTT	.	.	.	END=6485334;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998443:3,3:3-3,3-3:13,15,0,0:3,13:NULL:191.214:366.612,131.36:0.0,0.0:3.21756e-38,0.00108093,0.998922	0/0:19:0.988664:3,3:3-3,3-3:10,9,0,0:3,10:NULL:122.733:326.675,113.385:0.0,0.0:2.01741e-29,0.0065498,0.993466
+chr1	6485835	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6485900;RU=tc;PERIOD=2;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:33:0.296222:31,31:30-32,30-32:2,17,0,12:31,2:6,1|7,1|11,1|13,2|20,1|22,1|23,1|26,1|27,1|29,1|30,1:262.25:366.612,131.36:0.696174,0.696174:0.758903,0.240269,0.000848255	1/1:28:0.0592474:30,30:29-33,29-33:0,16,0,10:NULL:7,1|8,1|10,1|13,1|20,1|25,2|26,1|27,1|30,1:233.514:326.675,113.385:1.16057,1.16057:0.424781,0.462446,0.112889
+chr1	6486465	.	ATAATAATAATAATAATA	ATAATAATAATAATA	.	.	END=6486482;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.00001:5,5:5-5,5-5:22,15,0,0:5,22:NULL:226.929:366.612,131.36:0.0,0.0:1.0,1.61118e-06,1.10998e-39	0/0:31:0.848806:6,6:5-7,5-7:14,16,0,0:6,12|7,2:NULL:212.196:326.675,113.385:0.573403,0.573403:4.96e-21,0.00105893,0.998945
+chr1	6486709	.	GAGGTAGAGGTAGAGGTA	.	.	.	END=6486726;RU=gaggta;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:82:1.0:3,3:3-3,3-3:31,51,0,0:3,31:NULL:573.653:366.612,131.36:0.0,0.0:0.0,2.10299e-08,1.0	0/0:64:1.0:3,3:3-3,3-3:26,38,0,0:3,26:NULL:437.551:326.675,113.385:0.0,0.0:0.0,3.27061e-07,1.0
+chr1	6489307	.	AACCAACCAACCAACCAACCAACCAACCAACC	AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC	.	.	END=6489338;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.25467:13,13:11-13,11-13:2,7,0,2:13,2:4,1|9,1:89.9995:366.612,131.36:0.634282,0.634282:0.0,0.0,1.0	0/0:35:0.999807:8,8:8-8,8-8:16,14,0,5:8,16:2,1|3,1|4,1|7,2:234.493:326.675,113.385:0.0,0.0:9.71125e-37,0.000126954,0.999873
+chr1	6497659	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6497698;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:52:0.427282:22,25:22-22,19-26:10,26,0,13:22,10:5,1|6,1|11,2|12,2|14,1|15,2|18,3|25,1:396.318:366.612,131.36:0.29703,1.7353:6.86936e-27,4.79342e-07,1.0	0/0:54:0.961433:20,20:18-20,18-20:15,22,0,15:19,3|20,12:4,1|5,1|11,2|12,2|14,1|15,3|16,1|17,1|18,2|19,1:397.666:326.675,113.385:0.694341,0.694341:2.62129e-12,0.0371701,0.962893
+chr1	6507213	.	GGCAGGCAGGCA	.	.	.	END=6507224;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:0.999988:3,3:3-3,3-3:20,54,0,0:3,20:NULL:564.517:366.612,131.36:0.0,0.0:0.0,2.21705e-05,0.999979	0/0:66:1.0:3,3:3-3,3-3:19,41,0,6:3,19:2,6:480.663:326.675,113.385:0.0,0.0:0.0,5.54561e-06,0.999995
+chr1	6507332	.	CACACACACACACACA	CACACACACACA	.	.	END=6507347;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.238502:6,6:3-6,3-6:2,29,0,0:6,2:NULL:276.117:366.612,131.36:1.17884,1.17884:0.890963,0.109137,2.63841e-08	0/0:29:0.217846:8,8:5-8,5-8:2,27,0,0:8,2:NULL:258.606:326.675,113.385:1.2144,1.2144:0.000712133,0.468084,0.531312
+chr1	6507470	.	GTTGTTGTTGTT	.	.	.	END=6507481;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:68:1.0:4,4:4-4,4-4:40,22,0,4:4,40:3,4:391.267:366.612,131.36:0.0,0.0:0.0,2.86979e-12,1.0	0/0:42:1.0:4,4:4-4,4-4:30,9,0,3:4,30:3,3:232.787:326.675,113.385:0.0,0.0:0.0,3.9359e-09,1.0
+chr1	6509128	.	AAGAAAGAAAGA	.	.	.	END=6509139;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:27,23,0,0:3,27:NULL:320.759:366.612,131.36:0.0,0.0:0.0,5.62015e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:223.052:326.675,113.385:0.0,0.0:0.0,5.27716e-08,1.0
+chr1	6509313	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6509338;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:49:0.997491:17,17:13-17,13-17:17,15,0,15:16,2|17,15:5,1|6,4|7,1|8,1|12,1|13,1|14,1|16,5:333.024:366.612,131.36:0.974229,0.974229:0.0,6.11081e-07,1.0	0/1:32:0.646039:13,14:13-13,13-14:11,15,0,5:13,11:8,2|9,1|10,1|14,1:229.145:326.675,113.385:0.0,0.484441:2.72351e-19,9.01106e-08,1.0
+chr1	6509599	.	AAAAGAAAAGAAAAG	.	.	.	END=6509613;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999935:3,3:3-3,3-3:16,15,0,4:3,16:2,4:228.976:366.612,131.36:0.0,0.0:0.0,4.68756e-05,0.999956	0/0:26:0.999312:3,3:3-3,3-3:14,12,0,0:3,14:NULL:169.371:326.675,113.385:0.0,0.0:0.0,0.000471465,0.99953
+chr1	6513189	.	ACAAGTACAAGTACAAGT	ACAAGT	.	.	END=6513206;RU=acaagt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0778033:1,1:1-3,1-3:0,14,0,0:NULL:NULL:127.912:366.612,131.36:0.916684,0.916684:0.198352,0.51361,0.288123	0/0:28:0.999984:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.592:326.675,113.385:0.0,0.0:0.0,2.41846e-05,0.999978
+chr1	6519516	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC	.	.	END=6519555;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.326169:10,17:10-10,10-17:11,24,0,4:9,2|10,9:9,1|10,1|14,2:315.968:366.612,131.36:0.0,2.45293:1.0,0.0,0.0	0/0:35:0.811379:20,20:19-21,19-21:17,10,0,8:19,4|20,11|21,2:6,1|12,1|14,1|15,1|17,2|18,1|19,1:246.071:326.675,113.385:0.635209,0.635209:2.88909e-13,0.0495004,0.95058
+chr1	6519558	.	GTGTGTGTGTGTGTGTGT	GTGTGTGT	.	.	END=6519575;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.935555:4,4:4-5,4-5:8,24,0,0:4,8:NULL:254.948:366.612,131.36:0.469019,0.469019:1.0,0.0,0.0	0/0:24:0.999881:9,9:9-9,9-9:17,6,0,0:9,17:NULL:122.476:326.675,113.385:0.139319,0.139319:8.45691e-32,6.95839e-05,0.999933
+chr1	6520061	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=6520095;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:40:0.348329:5,7:5-5,5-8:22,10,0,8:5,22:3,3|5,1|7,4:251.551:366.612,131.36:0.0,0.516183:1.00958e-24,1.0,0.0	0/0:40:1.0:7,7:7-7,7-7:20,11,0,8:7,20:2,1|3,3|4,1|5,2|6,1:237.78:326.675,113.385:0.139319,0.139319:0.0,4.5035e-06,0.999995
+chr1	6520115	.	AACCAACCAACC	.	.	.	END=6520126;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.842359:3,3:3-3,3-3:6,9,0,0:3,6:NULL:104.041:366.612,131.36:0.0,0.0:8.02858e-22,0.0840801,0.916017	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.892:326.675,113.385:0.0,0.0:0.0,5.40295e-07,1.0
+chr1	6525229	.	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=6525264;RU=aaac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.0:7,7:7-7,7-7:27,13,0,4:7,27:3,1|6,3:259.229:366.612,131.36:0.0,0.0:1.0,2.10771e-08,0.0	0/0:41:1.0:9,9:9-9,9-9:19,15,0,7:9,19:3,1|4,2|5,1|6,1|8,2:266.151:326.675,113.385:0.0,0.0:0.0,8.39e-06,0.999994
+chr1	6525468	.	TGTGTGTGTGTGTGTG	.	.	.	END=6525483;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999729:8,8:8-8,8-8:15,20,0,5:8,15:6,4|7,1:286.139:366.612,131.36:0.0990099,0.0990099:4.7596e-28,0.000115341,0.999887	0/0:43:0.994747:8,8:7-8,7-8:29,10,0,4:7,4|8,25:4,1|5,2|7,1:253.989:326.675,113.385:0.419363,0.419363:4.07905e-40,0.00526366,0.994747
+chr1	6530019	.	AATTAATTAATT	.	.	.	END=6530030;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.92595:3,3:3-3,3-3:7,21,0,0:3,7:NULL:218.027:366.612,131.36:0.0,0.0:4.4995e-23,0.050793,0.949288	0/0:14:0.932457:3,3:3-3,3-3:7,7,0,0:3,7:NULL:92.1075:326.675,113.385:0.0,0.0:3.16866e-23,0.0352042,0.96486
+chr1	6540303	.	CAAAAACAAAAACAAAAA	.	.	.	END=6540320;RU=caaaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,19,0,3:3,23:2,3:280.557:366.612,131.36:0.0,0.0:0.0,2.94168e-07,1.0	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.404:326.675,113.385:0.0,0.0:0.0,1.50693e-06,1.0
+chr1	6542023	.	GTTTTGTTTTGTTTT	GTTTT	.	.	END=6542037;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0706208:1,1:1-4,1-4:0,12,0,0:NULL:NULL:111.332:366.612,131.36:1.20962,1.20962:0.24805,0.510238,0.241734	0/0:21:0.999747:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.451:326.675,113.385:0.0,0.0:0.0,0.000141988,0.999858
+chr1	6542152	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	END=6542199;RU=ttcc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:39:0.998437:11,12:11-11,9-12:7,20,0,12:11,5|12,2:2,1|3,2|4,2|5,4|6,2|8,1:306.906:366.612,131.36:0.0,0.705267:0.00121235,0.998792,2.93932e-09	0/0:21:0.996639:12,12:11-12,11-12:12,4,0,4:12,12:6,2|7,1|10,1:118.65:326.675,113.385:0.390807,0.390807:3.18866e-31,0.00190421,0.998102
+chr1	6549122	.	TATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATA	.	.	END=6549165;RU=ta;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:17:0.17645:19,19:17-19,17-19:2,11,0,4:19,2:4,1|5,1|8,1|17,1:144.179:366.612,131.36:0.542842,0.542842:0.871083,0.128396,0.000618529	1/3:11:0.028408:1,21:1-23,1-23:0,9,0,2:NULL:17,1|21,1:99.7489:326.675,113.385:8.54168,5.05515:0.263481,0.69884,0.0377403
+chr1	6555095	.	GTTGTTGTTGTT	.	.	.	END=6555106;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:24,20,0,0:4,24:NULL:282.923:366.612,131.36:0.0,0.0:0.0,1.12807e-06,1.0	0/0:43:1.0:4,4:4-4,4-4:30,11,0,2:4,30:3,2:230.61:326.675,113.385:0.0,0.0:0.0,4.15857e-09,1.0
+chr1	6557207	.	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	.	.	END=6557281;RU=ttc;PERIOD=3;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0444653:28,28:1-28,1-28:0,13,0,8:NULL:6,1|11,1|14,1|16,1|24,1|25,1|27,2:178.898:366.612,131.36:6.79896,6.79896:2.57014e-23,0.496631,0.503384	0/0:28:0.676758:25,25:25-25,25-25:5,7,0,16:25,5:3,2|4,1|9,1|10,1|12,1|14,3|15,1|16,1|17,2|20,1|22,1|23,1:208.385:326.675,113.385:0.0,0.0:2.55374e-08,0.150502,0.849579
+chr1	6558796	.	GGGTGGGTGGGT	.	.	.	END=6558807;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992568:3,3:3-3,3-3:10,12,0,0:3,10:NULL:147.84:366.612,131.36:0.0,0.0:1.03052e-29,0.00436478,0.995644	0/0:26:0.982124:3,3:3-3,3-3:9,17,0,0:3,9:NULL:193.248:326.675,113.385:0.0,0.0:1.17708e-26,0.0114446,0.988582
+chr1	6573728	.	TGTTTGTTTGTTTGTT	.	.	.	END=6573743;RU=tgtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:29,14,0,0:4,29:NULL:246.303:366.612,131.36:0.0,0.0:0.0,1.95774e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:24,8,0,0:4,24:NULL:166.086:326.675,113.385:0.0,0.0:0.0,4.58797e-07,1.0
+chr1	6574488	.	TATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=6574515;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999898:9,9:9-9,9-9:16,11,0,3:9,16:7,1|8,2:194.239:366.612,131.36:0.0990099,0.0990099:0.0,9.4853e-06,0.999993	0/0:30:0.999572:7,7:7-7,7-7:14,9,0,7:7,14:2,1|3,2|5,2|6,2:187.963:326.675,113.385:0.0,0.0:1.16039e-33,0.000195257,0.999805
+chr1	6575450	.	TTTATTTATTTATTTA	.	.	.	END=6575465;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:26,8,0,0:4,26:NULL:175.847:366.612,131.36:0.0,0.0:0.0,1.47876e-07,1.0	0/0:29:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:151.885:326.675,113.385:0.0,0.0:0.0,2.16543e-06,1.0
+chr1	6579057	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT	.	.	END=6579090;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:1.0:10,10:10-10,10-10:32,16,0,4:9,2|10,30:5,1|8,1|9,2:311.614:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:40:0.952174:17,17:16-18,16-18:15,12,0,12:16,3|17,12:5,1|9,1|10,1|11,2|12,2|14,1|15,3|16,1:284.142:326.675,113.385:0.382183,0.382183:4.47207e-14,0.0474327,0.952644
+chr1	6581899	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6581934;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.0409144:18,18:16-19,16-19:0,5,0,7:NULL:5,2|8,1|14,1|15,1|16,1|17,1:102.022:366.612,131.36:2.04575,2.04575:0.143728,0.552506,0.303883	1/0:23:0.741081:17,18:16-18,16-18:4,10,0,8:17,2|18,2:5,1|11,2|13,2|14,1|16,1|17,1:178.74:326.675,113.385:0.5634,0.711908:0.0240193,0.808404,0.167687
+chr1	6582216	.	TTTTGTTTTGTTTTG	.	.	.	END=6582230;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999709:3,3:3-3,3-3:15,6,0,0:3,15:NULL:115.111:366.612,131.36:0.0,0.0:0.0,0.000175043,0.999827	0/0:24:0.999727:3,3:3-3,3-3:15,9,0,0:3,15:NULL:141.616:326.675,113.385:0.0,0.0:0.0,0.000159982,0.999842
+chr1	6589837	.	AATGAATGAATG	.	.	.	END=6589848;RU=aatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:2-3,2-3:25,7,0,0:3,25:NULL:162.414:366.612,131.36:0.169767,0.169767:0.0,1.1825e-07,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:210.49:326.675,113.385:0.0,0.0:0.0,2.6585e-06,1.0
+chr1	6589908	.	AGTCAGTCAGTC	.	.	.	END=6589919;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999868:3,3:3-3,3-3:16,17,0,0:3,16:NULL:212.311:366.612,131.36:0.0,0.0:0.0,7.16104e-05,0.999932	0/0:45:1.0:3,3:3-3,3-3:22,21,0,2:3,22:2,2:286.925:326.675,113.385:0.0,0.0:0.0,6.81537e-07,1.0
+chr1	6591632	.	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	.	.	END=6591681;RU=ttcct;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:20:1.0:7,10:7-7,10-10:9,7,0,4:7,5|10,4:3,2|5,1|6,1:133.243:366.612,131.36:0.29703,0.0:8.67611e-10,1.0,2.09003e-09	0/0:28:0.970062:10,10:10-10,10-10:8,10,0,10:10,8:2,1|4,1|5,1|6,3|7,2|8,1|10,1:193.083:326.675,113.385:0.0,0.0:1.12305e-28,0.0144447,0.985586
+chr1	6591950	.	TCCTTTCCTTTCCTTTCCTT	.	.	.	END=6591969;RU=tcctt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.576692:4,4:4-4,4-4:4,2,0,0:4,4:NULL:32.3285:366.612,131.36:0.29703,0.29703:1.45405e-12,0.214419,0.785623	0/0:26:1.00001:4,4:4-4,4-4:23,1,0,2:4,23:2,1|3,1:113.988:326.675,113.385:0.0,0.0:0.0,4.22388e-07,1.0
+chr1	6598126	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6598147;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999831:11,11:11-11,11-11:17,12,0,2:11,17:6,1|8,1:193.141:366.612,131.36:0.0,0.0:6.30627e-27,0.000104113,0.999896	0/0:32:0.99526:11,11:10-11,10-11:17,12,0,3:10,2|11,15:6,1|7,1|8,1:215.682:326.675,113.385:0.195027,0.195027:7.28222e-22,0.00466829,0.995342
+chr1	6601383	.	TGTGTGTGTGTG	.	.	.	END=6601394;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999591:6,6:5-6,5-6:15,18,0,0:6,15:NULL:219.972:366.612,131.36:0.437216,0.437216:4.48063e-35,0.000300498,0.999704	0/0:34:1.00001:6,6:6-6,6-6:22,7,0,5:6,22:5,5:192.526:326.675,113.385:0.0,0.0:0.0,6.67475e-07,1.0
+chr1	6601485	.	AGGGAGGGAGGG	.	.	.	END=6601496;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:23,10,0,0:3,23:NULL:177.924:366.612,131.36:0.0,0.0:0.0,5.48719e-07,1.0	0/0:45:1.0:3,3:3-3,3-3:27,16,0,2:3,27:2,2:260.68:326.675,113.385:0.0,0.0:0.0,2.88615e-08,1.0
+chr1	6602519	.	TTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTATTA	.	.	END=6602545;RU=tta;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0356188:12,12:1-12,1-12:0,9,0,5:NULL:4,1|5,1|6,1|10,1|11,1:119.866:366.612,131.36:3.31696,3.31696:1.68215e-15,0.498435,0.501573	0/0:28:0.50064:9,9:8-9,8-9:15,8,0,5:8,3|9,12:3,1|5,1|6,1|7,1|8,1:177.338:326.675,113.385:0.472558,0.472558:4.96969e-19,0.499154,0.500847
+chr1	6626511	.	ACCCACCCACCC	.	.	.	END=6626522;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999187:3,3:3-3,3-3:13,19,0,0:3,13:NULL:223.009:366.612,131.36:0.0,0.0:4.387e-42,0.000474992,0.999529	0/0:51:1.00001:3,3:3-3,3-3:22,29,0,0:3,22:NULL:342.245:326.675,113.385:0.0,0.0:0.0,2.41659e-06,1.0
+chr1	6633217	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6633244;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.878848:15,15:13-16,13-16:17,19,0,12:13,2|15,12|16,3:5,3|6,4|9,1|10,1|14,3:359.766:366.612,131.36:0.751302,0.751302:1.4e-44,0.00210048,0.997905	0/0:51:1.0:14,14:14-14,14-14:26,16,0,9:14,26:5,1|6,1|7,2|8,2|9,1|10,1|13,1:333.577:326.675,113.385:0.0,0.0:5.2809e-28,3.76402e-07,1.0
+chr1	6635223	.	AGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6635246;RU=agga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.868967:12,12:9-12,9-12:8,29,0,12:12,8:4,3|6,2|7,2|8,1|9,3|10,1:399.905:366.612,131.36:0.727436,0.727436:0.0,0.0,1.0	0/0:50:1.0:6,6:6-6,6-6:22,23,0,5:6,22:3,2|4,1|5,2:338.493:326.675,113.385:0.0,0.0:0.0,1.79946e-06,1.0
+chr1	6637761	.	AAAACAAAACAAAAC	.	.	.	END=6637775;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:189.748:366.612,131.36:0.0,0.0:0.0,2.94786e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:19,9,0,2:3,19:2,1|3,1:177.292:326.675,113.385:0.0,0.0:0.0,4.63746e-06,0.999995
+chr1	6639022	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=6639049;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:54:0.99161:16,17:16-16,16-17:18,28,0,8:15,2|16,14|17,2:5,2|6,2|7,1|9,1|11,1|17,1:407.064:366.612,131.36:0.0,0.437216:2.0971e-39,2.13905e-10,1.0	0/0:77:0.981574:14,14:13-14,13-14:24,35,0,16:13,5|14,19:5,3|7,1|8,3|9,1|10,4|12,2|13,2:555.047:326.675,113.385:0.345543,0.345543:3.88947e-19,0.0184703,0.98157
+chr1	6650989	.	ACACACACACACACACAC	.	.	.	END=6651006;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:9,9:9-9,9-9:20,20,0,7:9,20:5,1|7,2|8,4:316.391:366.612,131.36:0.0990099,0.0990099:1.13195e-34,6.36215e-06,0.999994	0/0:38:0.999539:9,9:8-9,8-9:20,9,0,8:8,2|9,18:6,1|7,1|8,5|9,1:235.415:326.675,113.385:0.294378,0.294378:9.34017e-37,0.000476681,0.999523
+chr1	6652069	.	AATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	END=6652100;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.99999:7,9:7-7,7-9:21,13,0,2:7,15|8,2|9,4:5,1|8,1:250.151:366.612,131.36:0.0,0.45372:1.27709e-14,1.0,2.06024e-20	0/0:37:1.0:8,8:8-8,8-8:24,9,0,4:8,24:4,1|7,3:214.106:326.675,113.385:0.0,0.0:0.0,1.95385e-07,1.0
+chr1	6653054	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=6653073;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.00001:6,6:6-6,6-6:21,18,0,6:6,21:2,1|4,2|5,3:290.798:366.612,131.36:0.0,0.0:0.0,3.94884e-07,1.0	0/0:52:1.0:5,5:4-5,4-5:27,19,0,5:5,27:3,2|4,3:316.099:326.675,113.385:0.169767,0.169767:0.0,2.97714e-08,1.0
+chr1	6660614	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6660633;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999553:5,5:5-5,5-5:14,13,0,2:5,14:2,1|3,1:191.696:366.612,131.36:0.0,0.0:0.0,0.00022762,0.999774	0/0:29:0.999755:5,5:5-5,5-5:15,12,0,2:5,15:3,2:181.981:326.675,113.385:0.0,0.0:0.0,0.000150829,0.99985
+chr1	6661173	.	GTTTTGTTTTGTTTT	GTTTTGTTTTGTTTTGTTTT	.	.	END=6661187;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.995835:4,4:4-4,4-4:12,8,0,0:4,12:NULL:121.767:366.612,131.36:0.0,0.0:0.0,0.00236118,0.997647	0/0:32:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,2:183.986:326.675,113.385:0.0,0.0:0.0,3.33869e-06,1.0
+chr1	6662622	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6662661;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.997073:16,16:16-16,16-16:13,3,0,0:16,13:NULL:80.8523:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/2:42:0.286442:20,25:20-20,12-26:15,9,0,16:19,2|20,13:5,1|6,1|10,1|11,2|12,1|13,1|14,1|15,3|16,2|19,1|23,1|25,1:288.356:326.675,113.385:0.0,4.65993:6.93767e-25,5.20978e-13,1.0
+chr1	6663558	.	CTGCTGCTGCTG	.	.	.	END=6663569;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.577703:4,4:4-4,4-4:4,2,0,0:4,4:NULL:35.0695:366.612,131.36:0.0,0.0:2.88725e-11,0.234658,0.765367	0/0:63:1.0:4,4:4-4,4-4:34,27,0,2:4,34:3,2:402.862:326.675,113.385:0.0,0.0:0.0,3.71134e-10,1.0
+chr1	6664650	.	TATGTATGTATG	TATG	.	.	END=6664661;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:144.866:326.675,113.385:0.0,0.0:0.0,4.62343e-07,1.0
+chr1	6666335	.	TCCCTCCCTCCC	.	.	.	END=6666346;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:244.895:366.612,131.36:0.0,0.0:0.0,1.21091e-07,1.0	0/0:54:1.0:3,3:3-3,3-3:29,22,0,3:3,29:2,3:335.04:326.675,113.385:0.0,0.0:0.0,7.12479e-09,1.0
+chr1	6666349	.	TCTTTCTTTCTT	.	.	.	END=6666360;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00002:3,3:3-8,3-8:20,15,0,0:3,20:NULL:215.496:366.612,131.36:2.46433,2.46433:0.0,7.47024e-06,0.999994	0/0:51:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:300.283:326.675,113.385:0.0,0.0:0.0,1.5381e-09,1.0
+chr1	6666375	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6666390;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.996825:17,18:17-17,15-18:12,14,0,9:17,10|18,2:9,2|10,1|14,1|15,2|16,1|17,1|18,1:263.472:366.612,131.36:0.19802,0.8516:0.0,0.0,1.0	0/0:51:1.0:8,8:8-8,8-8:26,19,0,5:8,26:4,1|6,2|7,2:317.137:326.675,113.385:0.0,0.0:2.8061e-41,8.445e-08,1.0
+chr1	6671371	.	AAGAAAGAAAGAAAGA	.	.	.	END=6671386;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999854:4,4:3-4,3-4:16,13,0,0:4,16:NULL:181.48:366.612,131.36:0.236383,0.236383:0.0,0.00011318,0.999888	0/0:22:0.998983:4,4:4-4,4-4:14,8,0,0:4,14:NULL:134.801:326.675,113.385:0.0,0.0:2.455e-42,0.000664496,0.999339
+chr1	6673316	.	AAACAAACAAAC	.	.	.	END=6673327;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999999:3,3:3-3,3-3:19,6,0,0:3,19:NULL:126.548:366.612,131.36:0.0,0.0:0.0,9.74928e-06,0.999993	0/0:52:1.0:3,3:3-3,3-3:31,21,0,0:3,31:NULL:317.693:326.675,113.385:0.0,0.0:0.0,1.1136e-08,1.0
+chr1	6674435	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=6674462;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.316825:16,16:14-16,14-16:12,15,0,0:14,2|15,2|16,8:NULL:198.567:366.612,131.36:0.840244,0.840244:8.33851e-25,0.0022144,0.997791	0/0:54:0.993236:14,14:13-14,13-14:26,23,0,5:13,6|14,20:5,3|6,2:376.116:326.675,113.385:0.323567,0.323567:4.66391e-23,0.00678172,0.993234
+chr1	6680517	.	TGGGTGGGTGGG	.	.	.	END=6680528;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:189.462:366.612,131.36:0.0,0.0:0.0,3.00271e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:263.257:326.675,113.385:0.0,0.0:0.0,3.35788e-07,1.0
+chr1	6684271	.	ACAAACAAACAAACAA	.	.	.	END=6684286;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:228.612:366.612,131.36:0.0,0.0:0.0,5.85672e-06,0.999995	0/0:33:0.999992:4,4:4-4,4-4:18,9,0,6:4,18:3,6:196.145:326.675,113.385:0.0,0.0:0.0,1.14496e-05,0.999988
+chr1	6690576	.	TATATATATATA	.	.	.	END=6690587;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.975685:6,6:6-6,6-6:9,0,0,0:6,9:NULL:35.4976:366.612,131.36:0.0,0.0:3.9678e-15,0.0124883,0.987536	0/0:21:0.999204:6,6:6-6,6-6:14,7,0,0:6,14:NULL:125.106:326.675,113.385:0.0,0.0:7.2177e-23,0.000535469,0.999469
+chr1	6703494	.	TATATATATATATATATATATATATATA	TATATATATATATATATATATATATA	.	.	END=6703521;RU=ta;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.968492:13,13:13-13,13-13:9,9,0,3:13,9:8,1|10,1|13,1:146.856:366.612,131.36:0.139319,0.139319:0.982443,0.0175961,1.6944e-08	0/0:10:0.479794:14,14:14-14,14-14:4,6,0,0:14,4:NULL:71.5921:326.675,113.385:0.417958,0.417958:0.00029151,0.284597,0.715118
+chr1	6711923	.	CAAACAAACAAACAAA	.	.	.	END=6711938;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999782:4,4:4-4,4-4:15,22,0,2:4,15:2,1|3,1:285.144:366.612,131.36:0.0,0.0:2.09e-43,0.000166085,0.999835	0/0:36:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:181.384:326.675,113.385:0.0,0.0:0.0,3.89179e-08,1.0
+chr1	6713866	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6713917;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.221703:14,14:10-14,10-14:3,15,0,0:14,3:NULL:153.06:366.612,131.36:1.2177,1.2177:1.0,0.0,0.0	0/2:43:0.987703:26,27:21-26,21-28:13,15,0,12:25,2|26,9|27,2:5,1|6,1|13,2|14,1|15,1|21,1|23,3|24,1|27,1:300.289:326.675,113.385:0.973827,1.47541:6.51093e-19,1.9854e-05,0.99998
+chr1	6713993	.	TGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6714004;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.221145:6,6:3-6,3-6:2,13,0,0:6,2:NULL:129.107:366.612,131.36:0.991188,0.991188:6.73945e-05,0.532693,0.467348	0/1:62:0.284611:6,18:6-6,6-21:43,16,0,3:6,43:11,1|13,1|18,1:369.866:326.675,113.385:0.0,5.2541:0.0,5.92463e-21,1.0
+chr1	6716659	.	TTTCTTTCTTTC	.	.	.	END=6716670;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999993:3,3:3-3,3-3:18,20,0,2:3,18:2,2:265.082:366.612,131.36:0.0,0.0:0.0,1.79637e-05,0.999985	0/0:47:1.0:3,3:3-3,3-3:31,11,0,5:3,31:2,5:260.567:326.675,113.385:0.0,0.0:0.0,1.18079e-09,1.0
+chr1	6720277	.	ACATACATACAT	.	.	.	END=6720288;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:268.077:366.612,131.36:0.0,0.0:0.0,9.24506e-08,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.205:326.675,113.385:0.0,0.0:0.0,1.36787e-06,1.0
+chr1	6721062	.	CACACACACACA	.	.	.	END=6721073;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:19,12,0,6:6,19:4,1|5,5:235.048:366.612,131.36:0.0,0.0:8.662e-41,4.90018e-06,0.999995	0/0:34:0.999993:6,6:6-6,6-6:19,15,0,0:6,19:NULL:208.771:326.675,113.385:0.0,0.0:8.8628e-41,1.658e-05,0.999986
+chr1	6721105	.	TTTTGTTTTGTTTTG	.	.	.	END=6721119;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:198.723:366.612,131.36:0.0,0.0:0.0,1.695e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:32,6,0,3:3,32:2,3:204.171:326.675,113.385:0.0,0.0:0.0,5.65962e-10,1.0
+chr1	6722604	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=6722663;RU=ttttg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.998215:8,8:8-8,8-8:12,17,0,8:8,12:2,1|4,2|5,1|6,1|7,3:260.566:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:46:0.999287:12,12:12-12,12-12:13,15,0,18:12,13:3,1|4,2|5,4|6,1|7,1|8,3|9,2|11,4:320.81:326.675,113.385:0.0,0.0:1.50531e-38,0.000313811,0.999689
+chr1	6723584	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6723621;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:36:0.99981:19,23:19-23,23-24:7,16,0,11:19,3|23,4:4,1|6,1|13,3|15,1|17,2|18,1|22,2:268.49:366.612,131.36:1.01068,0.195027:2.2591e-26,0.000132187,0.999871	1/0:39:0.994947:18,19:18-20,19-19:14,11,0,13:18,4|19,10:6,1|8,1|9,2|10,2|14,2|15,2|16,2|18,1:273.883:326.675,113.385:0.540307,0.0:1.55211e-10,0.99495,0.0050625
+chr1	6728597	.	TTTCTTTCTTTC	.	.	.	END=6728608;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999538:3,3:3-3,3-3:14,9,0,0:3,14:NULL:133.683:366.612,131.36:0.0,0.0:0.0,0.000243385,0.999758	0/0:34:1.0:3,3:3-3,3-3:27,5,0,2:3,27:2,2:166.45:326.675,113.385:0.0,0.0:0.0,2.15002e-08,1.0
+chr1	6730348	.	TGGGTGGGTGGGTGGG	.	.	.	END=6730363;RU=tggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999531:4,4:4-4,4-4:15,27,0,0:4,15:NULL:301.947:366.612,131.36:0.0,0.0:0.0,0.000389541,0.999613	0/0:47:0.999845:4,4:4-4,4-4:16,29,0,2:4,16:3,2:341.888:326.675,113.385:0.0,0.0:0.0,0.000106812,0.999895
+chr1	6730422	.	TGCTTTGCTTTGCTT	.	.	.	END=6730436;RU=tgctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:33,20,0,0:3,33:NULL:310.714:366.612,131.36:0.0,0.0:0.0,7.62851e-10,1.0	0/0:69:1.0:3,3:3-3,3-3:54,10,0,5:3,54:2,5:341.071:326.675,113.385:0.0,0.0:0.0,1.7461e-16,1.0
+chr1	6734369	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=6734401;RU=ttg;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.980074:15,15:14-15,14-15:15,13,0,18:14,2|15,13:5,1|7,2|8,1|9,4|11,2|12,2|13,1|14,4|15,1:325.514:366.612,131.36:0.334882,0.334882:0.0,0.0,1.0	0/0:50:1.00001:11,11:11-11,11-11:20,16,0,14:11,20:3,1|4,1|5,2|6,2|7,2|8,1|9,2|10,3:341.701:326.675,113.385:0.0,0.0:3.28e-43,3.46465e-06,1.0
+chr1	6735467	.	AATCAATCAATC	.	.	.	END=6735478;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:3,3:2-3,2-3:20,8,0,0:3,20:NULL:153.232:366.612,131.36:0.36513,0.36513:0.0,3.69551e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:218.448:326.675,113.385:0.0,0.0:0.0,5.86043e-06,0.999995
+chr1	6736982	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6737025;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.609566:19,20:19-19,19-20:8,10,0,13:19,8:5,2|7,2|9,1|10,1|11,1|14,2|17,1|18,2|20,1:236.394:366.612,131.36:0.0,0.40582:0.75266,0.24735,4.34393e-15	0/0:43:0.903804:22,22:21-23,21-23:16,12,0,14:21,3|22,11|23,2:6,1|7,1|8,1|9,1|10,3|11,1|15,1|19,1|20,2|22,2:305.424:326.675,113.385:0.559734,0.559734:1.7949e-27,0.00514933,0.994866
+chr1	6740766	.	GTTTGTTTGTTTGTTT	.	.	.	END=6740781;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999991:4,4:4-4,4-4:19,15,0,2:4,19:3,2:228.062:366.612,131.36:0.0,0.0:0.0,1.52551e-05,0.999986	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:228.081:326.675,113.385:0.0,0.0:0.0,4.35477e-07,1.0
+chr1	6745472	.	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6745495;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.975726:6,6:5-6,5-6:19,23,0,9:5,2|6,17:2,2|3,2|4,1|5,4:362.099:366.612,131.36:0.419363,0.419363:0.0,0.0243312,0.975718	0/0:36:1.00001:6,6:3-6,3-6:21,8,0,6:6,21:2,1|3,1|4,2|5,2:198.513:326.675,113.385:0.934582,0.934582:0.0,1.88575e-06,1.0
+chr1	6748758	.	AAACAAACAAACAAAC	.	.	.	END=6748773;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,16,0,0:4,21:NULL:228.863:366.612,131.36:0.0,0.0:0.0,3.67721e-06,1.0	0/0:45:1.0:4,4:4-4,4-4:26,13,0,6:4,26:2,1|3,5:263.236:326.675,113.385:0.0,0.0:0.0,4.99948e-08,1.0
+chr1	6749336	.	GTTTGTTTGTTT	.	.	.	END=6749347;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.995381:3,3:3-3,3-3:11,10,0,0:3,11:NULL:133.595:366.612,131.36:0.0,0.0:6.29787e-37,0.00205199,0.997952	0/0:21:0.999856:3,3:3-3,3-3:16,5,0,0:3,16:NULL:109.32:326.675,113.385:0.0,0.0:0.0,6.8238e-05,0.999933
+chr1	6751150	.	AAAAGAAAAGAAAAG	AAAAG	.	.	END=6751164;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.108428:1,1:1-2,1-2:0,18,0,0:NULL:NULL:174.121:366.612,131.36:0.536301,0.536301:0.385972,0.49367,0.120449	0/0:35:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.154:326.675,113.385:0.0,0.0:0.0,9.84342e-06,0.999993
+chr1	6752073	.	TATCTATCTATC	.	.	.	END=6752084;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:2-3,2-3:30,27,0,2:3,30:2,2:374.491:366.612,131.36:0.236383,0.236383:0.0,5.52036e-09,1.0	0/0:41:1.0:3,3:3-3,3-3:27,12,0,2:3,27:2,2:228.917:326.675,113.385:0.0,0.0:0.0,2.1434e-08,1.0
+chr1	6752139	.	TTGTTGTTGTTG	.	.	.	END=6752150;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:32,23,0,0:4,32:NULL:334.176:366.612,131.36:0.0,0.0:0.0,4.61281e-09,1.0	0/0:39:1.00001:4,4:4-4,4-4:22,14,0,3:4,22:3,3:234.628:326.675,113.385:0.0,0.0:0.0,7.82498e-07,1.0
+chr1	6752213	.	AAACAAACAAAC	.	.	.	END=6752224;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:261.678:366.612,131.36:0.0,0.0:0.0,2.98266e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:27,11,0,2:3,27:2,2:222.519:326.675,113.385:0.0,0.0:0.0,2.70935e-08,1.0
+chr1	6754429	.	TTTGTTTTGTTTTGT	TTTGT	.	.	END=6754443;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0942719:1,1:1-3,1-3:0,14,0,0:NULL:NULL:133.774:366.612,131.36:0.8516,0.8516:0.236528,0.507018,0.256493	0/0:30:0.999998:3,3:3-3,3-3:18,9,0,3:3,18:2,3:174.936:326.675,113.385:0.0,0.0:0.0,9.15557e-06,0.999993
+chr1	6756494	.	TATATATATATATA	TATATATATATA	.	.	END=6756507;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.992278:6,6:6-7,6-7:11,7,0,0:6,11:NULL:106.224:366.612,131.36:0.382696,0.382696:0.996059,0.00394922,1.14248e-24	0/0:21:0.991242:7,7:7-7,7-7:11,10,0,0:7,11:NULL:132.924:326.675,113.385:0.0,0.0:1.14522e-19,0.00589292,0.994121
+chr1	6762157	.	CTTTCTTTCTTT	.	.	.	END=6762168;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.99973:3,3:3-3,3-3:15,6,0,0:3,15:NULL:115.032:366.612,131.36:0.0,0.0:0.0,0.000133363,0.999871	0/0:14:0.979383:3,3:3-3,3-3:9,5,0,0:3,9:NULL:84.5507:326.675,113.385:0.0,0.0:2.28729e-30,0.010148,0.989873
+chr1	6765667	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6765686;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:5,5:5-5,5-5:20,6,0,4:5,20:3,1|4,3:164.803:366.612,131.36:0.0,0.0:0.0,3.0411e-06,1.0	0/0:41:1.0:5,5:5-5,5-5:25,14,0,2:5,25:3,2:246.049:326.675,113.385:0.0,0.0:0.0,1.92216e-07,1.0
+chr1	6766469	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6766494;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.8163:20,20:18-23,18-23:7,16,0,8:20,7:8,1|10,1|13,2|14,1|16,1|18,1|19,1:243.529:366.612,131.36:1.7276,1.7276:0.0,0.0,1.0	0/0:44:0.997988:13,13:13-13,13-13:18,15,0,11:12,2|13,16:4,1|5,1|6,1|9,3|10,2|11,2|12,1:301.827:326.675,113.385:0.139319,0.139319:3.51002e-17,0.00196364,0.998042
+chr1	6766823	.	AAAAGAAAAGAAAAG	.	.	.	END=6766837;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999829:3,3:3-3,3-3:16,10,0,0:3,16:NULL:159.17:366.612,131.36:0.0,0.0:0.0,0.000110301,0.999894	0/0:28:0.999828:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.407:326.675,113.385:0.0,0.0:0.0,0.000120073,0.99988
+chr1	6772439	.	GGGTGGGTGGGT	.	.	.	END=6772450;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.568148:3,3:2-3,2-3:4,25,0,2:3,4:2,2:265.765:366.612,131.36:0.195027,0.195027:2.67462e-12,0.259457,0.740549	0/0:30:0.999152:3,3:3-3,3-3:14,16,0,0:3,14:NULL:197.744:326.675,113.385:0.0,0.0:7.51e-43,0.000631579,0.99937
+chr1	6777440	.	AAGAAGAAGAAG	.	.	.	END=6777451;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:24,10,0,0:4,24:NULL:188.867:366.612,131.36:0.0,0.0:0.0,4.41209e-07,1.0	0/0:38:1.0:4,4:4-4,4-4:25,11,0,2:4,25:3,2:210.852:326.675,113.385:0.0,0.0:0.0,1.09758e-07,1.0
+chr1	6782984	.	AAGAAGAAGAAG	.	.	.	END=6782995;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-5,4-5:25,11,0,0:4,25:NULL:198.879:366.612,131.36:0.311527,0.311527:0.0,3.56499e-07,1.0	0/0:44:1.0:4,4:3-4,3-4:24,19,0,0:4,24:NULL:268.718:326.675,113.385:0.270063,0.270063:0.0,6.42206e-07,1.0
+chr1	6784915	.	ACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6784950;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.538962:26,26:26-26,26-26:4,17,0,15:26,4:7,1|8,1|9,2|11,2|13,2|15,2|16,1|20,2|22,1|23,1:298.207:366.612,131.36:0.0990099,0.0990099:0.0,0.0,1.0	0/0:45:0.971275:18,18:16-18,16-18:10,21,0,12:18,10:5,1|7,2|9,1|10,2|11,1|12,1|14,2|15,2:331.534:326.675,113.385:0.480581,0.480581:1.27448e-12,0.0139845,0.986045
+chr1	6785690	.	TAAATAAATAAA	.	.	.	END=6785701;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,17,0,0:3,37:NULL:297.244:366.612,131.36:0.0,0.0:0.0,3.93083e-11,1.0	0/0:61:1.0:3,3:3-3,3-3:38,23,0,0:3,38:NULL:354.587:326.675,113.385:0.0,0.0:0.0,2.68286e-11,1.0
+chr1	6788409	.	TTTGTTTGTTTG	.	.	.	END=6788420;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:21,31,0,0:3,21:NULL:365.753:366.612,131.36:0.0,0.0:0.0,4.74914e-06,0.999995	0/0:47:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:259.589:326.675,113.385:0.0,0.0:0.0,7.9757e-10,1.0
+chr1	6790829	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6790884;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.100914:21,21:16-23,16-23:2,19,0,5:21,2:7,2|10,1|11,1|20,1:227.266:366.612,131.36:2.87013,2.87013:1.0,0.0,0.0	0/2:28:0.784671:28,29:28-29,28-29:6,13,0,9:28,4|29,2:5,1|6,1|7,1|13,1|14,1|15,1|16,1|24,1|25,1:230.192:326.675,113.385:0.253975,0.44763:8.85426e-07,0.0276042,0.972453
+chr1	6790889	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6790928;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.695649:14,15:14-16,15-16:9,21,0,4:14,3|15,6:11,2|12,1|14,1:268.723:366.612,131.36:0.637827,0.169767:1.0,0.0,0.0	0/0:33:0.98747:20,20:20-21,20-21:11,13,0,7:20,11:6,1|9,1|10,2|12,1|13,1|18,1:228.719:326.675,113.385:0.294378,0.294378:1.13944e-13,0.00558371,0.994429
+chr1	6798413	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=6798460;RU=gata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.649047:15,15:10-15,10-15:4,13,0,12:15,4:4,1|5,1|8,1|12,2|13,2|14,5:230.461:366.612,131.36:1.99337,1.99337:0.0,0.00268667,0.997321	0/0:32:0.992273:12,12:12-12,12-12:10,13,0,9:12,10:2,1|4,1|5,1|6,1|8,1|9,1|11,3:229.25:326.675,113.385:0.0,0.0:2.29615e-23,0.00432192,0.995689
+chr1	6801379	.	ACAAGACAAGACAAG	.	.	.	END=6801393;RU=acaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999695:3,3:3-3,3-3:14,10,0,0:3,14:NULL:150.4:366.612,131.36:0.0,0.0:0.0,0.00020878,0.999795	0/0:52:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:318.985:326.675,113.385:0.0,0.0:0.0,8.73404e-09,1.0
+chr1	6802048	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6802089;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.993973:15,15:15-15,15-15:12,19,0,8:15,12:5,1|6,1|8,1|9,1|10,1|12,1|14,2:285.784:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:43:0.961253:21,21:18-29,18-29:15,13,0,13:20,3|21,12:5,1|6,1|8,1|10,1|13,3|15,1|16,1|18,1|19,2|20,1:297.166:326.675,113.385:4.22868,4.22868:1.29016e-12,0.0378589,0.962208
+chr1	6804083	.	TGCTGCTGCTGCTGC	.	.	.	END=6804097;RU=tgc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999993:5,5:5-5,5-5:20,14,0,0:5,20:NULL:206.277:366.612,131.36:0.0,0.0:0.0,1.2538e-05,0.999987	0/0:39:1.0:5,5:5-5,5-5:29,10,0,0:5,29:NULL:204.217:326.675,113.385:0.0,0.0:0.0,1.42854e-08,1.0
+chr1	6806447	.	CATGCATGCATG	.	.	.	END=6806458;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:3,3:3-3,3-3:34,27,0,0:3,34:NULL:373.021:366.612,131.36:0.0,0.0:0.0,5.00038e-10,1.0	0/0:49:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:287.628:326.675,113.385:0.0,0.0:0.0,5.02911e-09,1.0
+chr1	6812486	.	AGCAAGCAAGCA	.	.	.	END=6812497;RU=agca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.99993:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.095:366.612,131.36:0.0,0.0:0.0,4.03126e-05,0.999963	0/0:30:0.999946:3,3:3-3,3-3:17,13,0,0:3,17:NULL:190.203:326.675,113.385:0.0,0.0:0.0,5.80473e-05,0.999942
+chr1	6829363	.	ACCCACCCACCC	.	.	.	END=6829374;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.916632:3,3:3-3,3-3:7,18,0,0:3,7:NULL:192.672:366.612,131.36:0.0,0.0:5.55052e-22,0.0621172,0.937973	0/0:43:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:284.469:326.675,113.385:0.0,0.0:0.0,4.73609e-06,0.999995
+chr1	6830436	.	ACACACACACAC	.	.	.	END=6830447;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999811:6,6:5-7,5-7:27,9,0,4:5,2|6,25:4,1|5,3:229.185:366.612,131.36:0.374933,0.374933:0.0,0.000191561,0.999811	0/0:37:0.998197:6,6:5-6,5-6:23,10,0,4:5,2|6,21:4,2|5,2:221.385:326.675,113.385:0.36513,0.36513:4.3e-44,0.00180941,0.998194
+chr1	6830470	.	GGAGGGAGGGAG	.	.	.	END=6830481;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,8,0,2:3,26:2,2:189.305:366.612,131.36:0.0,0.0:0.0,8.93492e-08,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:186.791:326.675,113.385:0.0,0.0:0.0,1.12599e-06,1.0
+chr1	6831326	.	AAGCAAGCAAGC	.	.	.	END=6831337;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.994923:3,3:3-3,3-3:11,23,0,0:3,11:NULL:260.069:366.612,131.36:0.0,0.0:6.69228e-35,0.0030612,0.99695	0/0:25:0.999973:3,3:3-3,3-3:18,7,0,0:3,18:NULL:136.979:326.675,113.385:0.0,0.0:0.0,2.05381e-05,0.99998
+chr1	6832131	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6832174;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:40:0.323942:22,39:22-22,22-40:13,13,0,13:21,4|22,9:5,1|9,1|10,2|12,1|17,2|18,1|20,2|22,1|25,1|39,1:295.33:366.612,131.36:0.0990099,7.11791:1.85089e-26,5.46776e-09,1.0	0/0:41:0.818535:22,22:22-23,22-23:15,12,0,14:21,2|22,11|23,2:4,1|5,1|6,1|9,1|10,1|11,1|12,1|13,1|15,3|16,1|18,1|20,1:293.524:326.675,113.385:0.469228,0.469228:1.8178e-13,0.00523002,0.994783
+chr1	6834875	.	CTTCTTCTTCTTCTT	.	.	.	END=6834889;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998465:5,5:4-5,4-5:14,15,0,0:5,14:NULL:196.131:366.612,131.36:0.36513,0.36513:5.05e-42,0.00124333,0.998762	0/0:41:1.0:5,5:5-5,5-5:24,17,0,0:5,24:NULL:253.329:326.675,113.385:0.0,0.0:0.0,8.6663e-07,1.0
+chr1	6842625	.	ATGGATGGATGG	.	.	.	END=6842636;RU=atgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:30,20,0,0:3,30:NULL:299.761:366.612,131.36:0.0,0.0:0.0,5.34059e-09,1.0	0/0:46:1.0:3,3:3-3,3-3:27,16,0,3:3,27:2,3:272.712:326.675,113.385:0.0,0.0:0.0,2.1608e-08,1.0
+chr1	6845815	.	TGTTGTTGTTGT	.	.	.	END=6845826;RU=tgt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:21,12,0,2:4,21:3,2:209.619:366.612,131.36:0.0,0.0:0.0,2.37087e-06,1.0	0/0:22:0.999669:4,4:4-4,4-4:15,7,0,0:4,15:NULL:125.168:326.675,113.385:0.0,0.0:0.0,0.00017801,0.999826
+chr1	6852419	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA,AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6852478;RU=agga;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:56:0.991325:15,17:5-15,5-17:6,30,0,18:15,4|17,2:3,1|5,1|6,1|7,1|8,1|9,4|10,2|11,2|12,1|14,2|15,1|16,1:437.994:366.612,131.36:4.50067,5.02301:2.62865e-23,2.88987e-06,1.0	0/1:44:0.879306:15,16:15-15,15-16:12,20,0,12:15,9|16,3:3,1|5,1|6,1|7,1|9,2|11,2|12,2|13,1|15,1:332.587:326.675,113.385:0.0,0.484441:2.61894e-23,0.000296602,0.999705
+chr1	6852486	.	AGGCAGGCAGGC	.	.	.	END=6852497;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:25,28,0,0:3,25:NULL:350.825:366.612,131.36:0.0,0.0:0.0,3.01088e-07,1.0	0/0:43:1.0:3,3:3-3,3-3:31,12,0,0:3,31:NULL:228.067:326.675,113.385:0.0,0.0:0.0,2.71519e-09,1.0
+chr1	6855646	.	CAGCAGCAGCAGCAG	.	.	.	END=6855660;RU=cag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:28,15,0,0:5,28:NULL:240.107:366.612,131.36:0.0,0.0:0.0,3.39882e-08,1.0	0/0:35:1.0:5,5:5-5,5-5:24,11,0,0:5,24:NULL:195.661:326.675,113.385:0.0,0.0:0.0,4.6101e-07,1.0
+chr1	6856365	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6856396;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.168138:31,31:22-31,22-31:2,6,0,9:31,2:5,1|7,1|8,1|13,1|15,1|17,1|23,1|28,1|30,1:139.102:366.612,131.36:4.26,4.26:0.0,0.0,1.0	0/0:29:0.999082:16,16:16-16,16-16:20,5,0,4:15,3|16,17:5,1|10,1|11,1|15,1:165.745:326.675,113.385:0.0,0.0:2.09772e-20,0.000841373,0.999164
+chr1	6858278	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6858317;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:49:0.293981:17,27:17-17,16-29:13,16,0,19:16,4|17,9:5,2|6,1|8,3|9,1|10,3|11,1|12,2|13,1|15,3|16,1|26,1:375.164:366.612,131.36:0.139319,5.28021:0.000461757,0.999538,1.06857e-27	0/3:48:0.330157:20,36:20-20,19-36:20,12,0,16:19,5|20,13|21,2:4,1|5,1|8,1|9,2|11,1|12,2|14,1|15,1|16,3|17,1|18,1|36,1:357.236:326.675,113.385:0.0990099,8.00505:3.23109e-15,0.00236699,0.99764
+chr1	6862315	.	AAAATAAAATAAAAT	.	.	.	END=6862329;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999771:3,3:3-3,3-3:16,13,0,0:3,16:NULL:184.204:366.612,131.36:0.0,0.0:0.0,0.000148907,0.99985	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:238.178:326.675,113.385:0.0,0.0:0.0,2.03729e-07,1.0
+chr1	6864440	.	TTTGTTTGTTTG	.	.	.	END=6864451;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.9999:3,3:3-3,3-3:16,18,0,0:3,16:NULL:224.335:366.612,131.36:0.0,0.0:0.0,7.11331e-05,0.999932	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:161.012:326.675,113.385:0.0,0.0:0.0,2.86971e-07,1.0
+chr1	6865995	.	AAAGAAAAGAAAAGA	AAAGAAAAGA	.	.	END=6866009;RU=aaaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.999474:2,2:2-2,2-2:14,22,0,0:2,14:NULL:281.364:366.612,131.36:0.0,0.0:0.999782,0.000218486,1.0213e-41	0/0:28:0.997123:3,3:3-3,3-3:11,14,0,3:3,11:2,3:191.584:326.675,113.385:0.0,0.0:2.80918e-35,0.00147673,0.998527
+chr1	6868261	.	GTTTGTTTGTTT	.	.	.	END=6868272;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.99998:3,3:3-3,3-3:18,12,0,0:3,18:NULL:182.169:366.612,131.36:0.0,0.0:0.0,1.59765e-05,0.999986	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:254.657:326.675,113.385:0.0,0.0:0.0,6.79809e-08,1.0
+chr1	6869420	.	ATGTAGATGTAGATGTAGATGTAG	ATGTAGATGTAGATGTAG	.	.	END=6869443;RU=atgtag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:1.0:3,3:3-3,3-3:30,15,0,2:3,30:2,2:271.461:366.612,131.36:0.0,0.0:1.0,2.36335e-09,0.0	0/0:38:1.0:4,4:4-4,4-4:28,8,0,2:4,28:3,2:201.403:326.675,113.385:0.0,0.0:0.0,1.7602e-08,1.0
+chr1	6870752	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6870787;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:49:0.681137:25,25:24-26,24-26:5,22,0,20:25,5:4,2|8,1|9,2|11,2|14,1|15,1|16,1|19,2|20,3|22,1|23,3|24,1:385.769:366.612,131.36:0.597515,0.597515:0.0,0.0,1.0	0/1:38:0.986942:18,19:17-18,17-19:14,13,0,11:17,3|18,9|19,2:4,1|6,1|7,1|10,1|12,1|13,1|15,2|16,1|17,1|19,1:282.411:326.675,113.385:0.169767,0.61895:5.50292e-17,0.000124617,0.999879
+chr1	6872012	.	TTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTG	.	.	END=6872031;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:26:0.984722:3,4:3-4,4-4:12,14,0,0:3,2|4,10:NULL:189.039:366.612,131.36:0.478946,0.0:4.49923e-26,0.984772,0.0152629	0/0:27:0.999866:4,4:4-4,4-4:16,8,0,3:4,16:2,1|3,2:156.875:326.675,113.385:0.0,0.0:0.0,6.58613e-05,0.999934
+chr1	6872093	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6872104;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.942844:18,19:18-19,19-19:9,13,0,8:18,2|19,7:6,2|9,1|14,1|15,1|17,2|18,1:229.936:366.612,131.36:0.489073,0.0:0.0,0.0,1.0	0/0:22:0.99991:6,6:6-6,6-6:17,5,0,0:6,17:NULL:110.788:326.675,113.385:0.0,0.0:2.43651e-29,5.65674e-05,0.999947
+chr1	6872191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6872254;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.835472:14,14:12-14,12-14:7,6,0,0:14,7:NULL:84.8398:366.612,131.36:0.803751,0.803751:1.0,0.0,0.0	2/3:26:0.0451539:29,34:16-32,16-34:0,13,0,10:NULL:5,1|8,1|13,1|16,1|20,1|26,1|27,1|29,2|34,1:195.557:326.675,113.385:7.01576,8.73288:5.43447e-08,0.643162,0.35688
+chr1	6876058	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC	.	.	END=6876085;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:0.985613:18,18:16-18,16-18:17,21,0,14:16,2|18,15:6,1|7,3|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,1:392.646:366.612,131.36:0.673267,0.673267:0.0,6.87905e-06,0.999994	0/0:35:0.999752:14,14:14-17,14-17:17,5,0,9:14,17:5,2|8,2|9,1|11,1|12,1|13,1|14,1:190.632:326.675,113.385:0.924033,0.924033:3.31908e-30,2.98706e-05,0.999971
+chr1	6876396	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=6876439;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:8,8:8-8,8-8:27,15,0,9:8,27:4,2|5,1|7,6:316.024:366.612,131.36:0.0,0.0:1.0,1.22712e-08,0.0	0/0:35:0.995289:11,11:10-11,10-11:11,15,0,8:11,11:3,1|4,1|5,2|6,1|7,1|8,1|9,1:246.682:326.675,113.385:0.323567,0.323567:2.91614e-28,0.00364165,0.996368
+chr1	6876754	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6876787;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.57464:20,20:17-20,17-20:8,15,0,4:19,2|20,6:6,1|14,3:218.122:366.612,131.36:1.04876,1.04876:2.22301e-25,0.0277766,0.972279	0/0:45:0.953393:17,17:17-18,17-18:15,15,0,15:17,13|18,2:4,2|7,2|9,1|11,1|12,4|13,1|14,2|15,1|16,1:330.521:326.675,113.385:0.298675,0.298675:9.93793e-16,0.00036573,0.999636
+chr1	6877580	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6877621;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.982039:16,16:16-16,16-16:11,21,0,9:16,11:6,2|8,1|9,2|10,2|15,2:310.378:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/2:22:0.299487:21,25:21-21,21-27:7,5,0,10:21,7:6,1|7,1|8,2|9,1|10,1|12,1|14,1|16,1|25,1:164.464:326.675,113.385:0.0,2.20972:3.99637e-15,1.38343e-07,1.0
+chr1	6877626	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6877675;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.921099:25,25:23-26,23-26:9,18,0,5:25,9:5,1|6,1|10,1|11,1|14,1:248.263:366.612,131.36:0.694906,0.694906:7.95104e-13,0.0391718,0.960897	1/1:20:0.124742:24,24:17-25,17-25:2,6,0,9:24,2:6,1|9,1|11,2|15,1|16,2|17,2:136.348:326.675,113.385:3.45807,3.45807:0.699534,0.284439,0.016058
+chr1	6881104	.	ATATATATATAT	ATATATATATATAT	.	.	END=6881115;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999432:7,7:6-8,6-8:23,12,0,0:6,2|7,19|8,2:NULL:218.603:366.612,131.36:0.263076,0.263076:0.0,2.27564e-06,1.0	0/0:31:1.00001:6,6:6-6,6-6:21,9,0,0:6,21:NULL:171.527:326.675,113.385:0.0,0.0:4.71048e-28,4.14109e-06,0.999995
+chr1	6881253	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6881268;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.0:7,7:7-7,7-7:32,21,0,2:7,32:4,1|5,1:332.74:366.612,131.36:0.0,0.0:1.0,1.53291e-09,0.0	0/2:35:0.296309:8,13:8-8,8-14:19,12,0,4:8,19:4,1|5,1|7,1|13,1:230.348:326.675,113.385:0.0,2.59293:3.54084e-40,9.23434e-08,1.0
+chr1	6882309	.	TTGTTGTTGTTG	.	.	.	END=6882320;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:21,18,0,0:4,21:NULL:252.298:366.612,131.36:0.0,0.0:0.0,6.90775e-06,0.999994	0/0:28:0.999986:4,4:4-4,4-4:19,9,0,0:4,19:NULL:159.511:326.675,113.385:0.0,0.0:0.0,1.9165e-05,0.99998
+chr1	6884104	.	CAACAACAACAACAA	.	.	.	END=6884118;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:5,5:5-5,5-5:29,25,0,5:5,29:3,2|4,3:394.96:366.612,131.36:0.0,0.0:0.0,7.48635e-09,1.0	0/0:33:1.00001:5,5:5-5,5-5:21,10,0,2:5,21:4,2:192.446:326.675,113.385:0.0,0.0:0.0,3.0523e-06,1.0
+chr1	6886094	.	AAAACAAAACAAAAC	.	.	.	END=6886108;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:239.002:366.612,131.36:0.0,0.0:0.0,2.78941e-07,1.0	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:152.486:326.675,113.385:0.0,0.0:0.0,6.3523e-06,0.999994
+chr1	6888655	.	GCCAGCCAGCCA	.	.	.	END=6888666;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:237.094:366.612,131.36:0.0,0.0:0.0,2.2127e-08,1.0	0/0:32:1.0:3,3:3-3,3-3:23,7,0,2:3,23:2,2:168.016:326.675,113.385:0.0,0.0:0.0,4.24213e-07,1.0
+chr1	6891722	.	AGGGAGGGAGGGAGGG	.	.	.	END=6891737;RU=aggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999993:4,4:4-4,4-4:19,20,0,0:4,19:NULL:256.994:366.612,131.36:0.0,0.0:0.0,1.69107e-05,0.999986	0/0:35:0.999888:4,4:3-4,3-4:16,18,0,0:4,16:NULL:228.159:326.675,113.385:0.21692,0.21692:1.29816e-39,0.000103964,0.999896
+chr1	6891738	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6891777;RU=ga;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.0539607:8,40:1-34,30-40:0,26,0,9:NULL:8,2|23,1|27,1|28,2|30,1|36,1|38,1:320.108:366.612,131.36:8.48812,2.77655:0.0,0.861394,0.138693	0/0:36:0.525647:20,20:18-20,18-20:9,18,0,8:19,3|20,6:5,1|6,1|8,1|14,3|18,1|20,1:277.976:326.675,113.385:0.66122,0.66122:2.49917e-14,0.468764,0.531344
+chr1	6897317	.	TATATATATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=6897366;RU=ta;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00329521:1,1:1-4,1-4:0,6,0,0:NULL:NULL:52.7677:366.612,131.36:0.947603,0.947603:0.508489,0.44558,0.046024	2/2:9:0.110435:24,24:19-26,19-26:2,4,0,0:24,2:NULL:48.8495:326.675,113.385:2.84784,2.84784:0.636096,0.33096,0.0330274
+chr1	6901344	.	TATTATTATTAT	.	.	.	END=6901355;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:34,19,0,2:4,34:3,2:320.056:366.612,131.36:0.0,0.0:0.0,3.95915e-10,1.0	0/0:21:0.999632:4,4:4-4,4-4:15,6,0,0:4,15:NULL:114.575:326.675,113.385:0.0,0.0:3.2e-44,0.000213797,0.999788
+chr1	6901756	.	TTGGTTGGTTGG	.	.	.	END=6901767;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:300.394:366.612,131.36:0.0,0.0:0.0,4.12473e-06,0.999995	0/0:26:0.999895:3,3:3-3,3-3:16,6,0,4:3,16:2,4:150.512:326.675,113.385:0.0,0.0:0.0,3.60843e-05,0.999964
+chr1	6905302	.	ACCACCACCACC	.	.	.	END=6905313;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:32,12,0,0:4,32:NULL:235.669:366.612,131.36:0.0,0.0:0.0,1.35117e-09,1.0	0/0:19:0.995309:4,4:4-4,4-4:11,8,0,0:4,11:NULL:114.625:326.675,113.385:0.0,0.0:1.1877e-37,0.00296103,0.997048
+chr1	6908211	.	CCCTCCCTCCCT	.	.	.	END=6908222;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:28,17,0,0:3,28:NULL:271.107:366.612,131.36:0.0,0.0:0.0,2.38284e-08,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.755:326.675,113.385:0.0,0.0:0.0,2.04981e-06,1.0
+chr1	6910139	.	AAACAAACAAACAAACAAAC	.	.	.	END=6910158;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:5,5:5-5,5-5:26,16,0,5:5,26:3,2|4,3:284.722:366.612,131.36:0.0,0.0:0.0,3.30433e-08,1.0	0/0:29:0.998254:5,5:5-5,5-5:13,14,0,2:5,13:2,1|4,1:194.432:326.675,113.385:0.0,0.0:2e-44,0.00126943,0.998733
+chr1	6911240	.	CCCACCCCACCCCAC	.	.	.	END=6911254;RU=cccac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999009:3,3:3-3,3-3:14,22,0,0:3,14:NULL:263.812:366.612,131.36:0.19802,0.19802:1.35e-43,0.000773966,0.999227	0/0:24:0.945509:3,3:3-3,3-3:8,16,0,0:3,8:NULL:177.178:326.675,113.385:0.19802,0.19802:1.03576e-24,0.0401747,0.959892
+chr1	6925140	.	TTTGTTTGTTTGTTTG	.	.	.	END=6925155;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:21,14,0,4:4,21:2,2|3,2:245.162:366.612,131.36:0.0,0.0:0.0,3.32111e-06,1.0	0/0:35:1.0:4,4:4-4,4-4:20,13,0,2:4,20:2,1|3,1:211.672:326.675,113.385:0.0,0.0:0.0,6.06461e-06,0.999994
+chr1	6930503	.	TGTTTTTTTGTTTTTTTGTTTTTT	.	.	.	END=6930526;RU=tgtttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.996973:3,3:1-3,1-3:12,10,0,0:3,12:NULL:142.16:366.612,131.36:0.922441,0.922441:1.80829e-40,0.00235837,0.997648	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:171.573:326.675,113.385:0.0,0.0:0.0,2.04177e-06,1.0
+chr1	6933915	.	GAGGGGAGGAGGGGAGGAGGGGAGGAGGGGAG	GAGGGGAGGAGGGGAG	.	.	END=6933946;RU=gaggggag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.999974:2,2:2-2,2-2:18,10,0,0:2,18:NULL:163.717:366.612,131.36:0.0,0.0:0.999986,1.75747e-05,0.0	0/0:8:0.353389:4,4:1-4,1-4:3,5,0,0:4,3:NULL:60.2262:326.675,113.385:0.782116,0.782116:2.05313e-08,0.459316,0.540791
+chr1	6935598	.	TACATACATACA	.	.	.	END=6935609;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:24,3,0,3:3,24:2,3:140.786:366.612,131.36:0.0,0.0:0.0,1.42977e-07,1.0	0/0:26:0.999555:3,3:3-3,3-3:14,8,0,4:3,14:2,4:155.577:326.675,113.385:0.0,0.0:0.0,0.000136997,0.999865
+chr1	6935929	.	TAATTAATTAAT	.	.	.	END=6935940;RU=taat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:24,18,0,3:3,24:2,3:274.258:366.612,131.36:0.0,0.0:0.0,1.95933e-07,1.0	0/0:20:0.997324:3,3:3-3,3-3:12,8,0,0:3,12:NULL:115.153:326.675,113.385:0.0,0.0:6.01711e-39,0.00141431,0.998588
+chr1	6938052	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6938097;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:56:0.340107:15,23:15-15,15-24:26,22,0,7:15,26:4,1|9,1|10,1|14,2|16,1|22,1:386.612:366.612,131.36:0.0,3.7378:0.269567,0.730435,0.0	0/2:58:0.361021:23,29:23-23,20-31:15,17,0,23:22,2|23,13:5,1|6,1|7,1|8,1|11,2|12,2|13,3|14,1|16,2|17,1|18,2|19,1|20,1|21,2|22,1|29,1:436.004:326.675,113.385:0.0,3.32414:1.20159e-17,2.01133e-05,0.99998
+chr1	6938544	.	ATACATACATACATAC	.	.	.	END=6938559;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:81:1.0:4,4:4-4,4-4:48,27,0,6:4,48:3,6:480.317:366.612,131.36:0.0,0.0:0.0,1.37533e-14,1.0	0/0:65:1.0:4,4:4-4,4-4:39,21,0,5:4,39:2,1|3,4:381.92:326.675,113.385:0.0,0.0:0.0,7.22622e-12,1.0
+chr1	6938593	.	CACACACACACACACACA	CACACACACACACACACACA,CACACACACACACACACACACA	.	.	END=6938610;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:42:0.969887:9,11:9-10,9-11:8,27,0,7:9,3|10,2|11,3:5,1|6,1|8,4|9,1:349.387:366.612,131.36:0.425627,0.513899:5.37484e-21,1.1268e-05,0.999993	0/1:64:0.961031:9,10:9-9,9-10:30,23,0,10:9,28|10,2:4,2|5,1|8,6|10,1:428.184:326.675,113.385:0.0,0.498798:7.6e-44,2.5635e-10,1.0
+chr1	6938918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6938965;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:76:0.560131:25,25:24-27,24-27:15,32,0,28:24,5|25,8|26,2:8,2|9,2|10,2|11,3|12,4|13,1|14,1|15,1|16,2|17,3|19,2|22,1|23,2|24,1|25,1:605.849:366.612,131.36:0.837322,0.837322:1.36305e-31,8.65444e-05,0.999917	0/2:64:0.403396:24,29:24-24,24-29:18,24,0,20:23,5|24,13:5,3|6,1|7,1|8,1|9,1|10,1|11,1|13,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|28,1|29,1:487.422:326.675,113.385:0.0,1.35271:1.02382e-27,1.19979e-11,1.0
+chr1	6945641	.	TGTGAGTGTGAGTGTGAG	TGTGAGTGTGAGTGTGAGTGTGAGTGTGAG	.	.	END=6945658;RU=tgtgag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:35:1.0:3,5:3-3,5-5:21,14,0,0:3,14|5,7:NULL:226.503:366.612,131.36:0.0,0.0:0.0,3.70882e-29,1.0	0/0:54:1.0:3,3:3-3,3-3:29,21,0,4:3,29:2,3|3,1:332.918:326.675,113.385:0.0,0.0:0.0,8.39224e-09,1.0
+chr1	6945661	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6945680;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.284109:16,33:16-16,15-34:20,14,0,9:15,5|16,13|18,2:5,1|8,2|11,1|12,2|16,1|29,1|32,1:327.387:366.612,131.36:0.0990099,8.11798:0.0,0.0,1.0	0/0:62:1.0:10,10:10-10,10-10:39,17,0,6:9,3|10,36:5,1|6,1|7,1|8,1|9,2:371.987:326.675,113.385:0.0990099,0.0990099:0.0,2.72637e-08,1.0
+chr1	6954438	.	TATATATATATATATATA	TATATATATATATATATATA	.	.	END=6954455;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.803913:10,10:10-11,10-11:6,5,0,0:10,6:NULL:69.3638:366.612,131.36:0.465241,0.465241:6.04208e-12,0.0552173,0.944865	0/0:22:0.999478:9,9:9-9,9-9:15,7,0,0:9,15:NULL:128.249:326.675,113.385:0.0,0.0:2.06945e-18,0.000350763,0.999652
+chr1	6956316	.	ATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=6956347;RU=attt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.816834:7,7:6-7,6-7:6,9,0,3:7,6:3,1|5,1|6,1:131.956:366.612,131.36:0.481803,0.481803:0.925084,0.0750118,2.38259e-10	0/0:26:0.999661:8,8:8-8,8-8:15,5,0,6:8,15:3,2|5,2|6,2:152.494:326.675,113.385:0.0,0.0:6.12333e-34,0.000170439,0.999833
+chr1	6957040	.	ATCATCATCATC	.	.	.	END=6957051;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999894:4,4:4-4,4-4:16,14,0,2:4,16:3,2:206.579:366.612,131.36:0.0,0.0:1.47e-43,7.23921e-05,0.999932	0/0:36:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:182.817:326.675,113.385:0.0,0.0:0.0,3.3155e-08,1.0
+chr1	6958768	.	GTGTGTGTGTGT	GTGTGT,GTGTGTGTGTGTGTGTGT	.	.	END=6958779;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:0.425553:3,6:3-13,6-13:17,14,0,4:3,11|6,6:4,1|5,1|9,1|11,1:275.27:366.612,131.36:2.75429,2.87398:6.8036e-10,1.0,4.1744e-19	0/2:29:0.293816:6,9:6-6,6-10:10,17,0,2:6,10:6,1|8,1:213.017:326.675,113.385:0.0,1.39551:5.11656e-28,6.98227e-08,1.0
+chr1	6958877	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6958916;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:53:0.288595:17,27:17-17,16-27:20,18,0,15:16,4|17,14|18,2:4,1|5,1|6,1|7,1|8,1|13,2|14,4|15,2|16,1|24,1:394.452:366.612,131.36:0.0,4.77915:0.0548475,0.945238,1.754e-42	0/3:44:0.318887:20,35:20-20,20-35:15,11,0,15:20,15:5,1|7,3|9,2|12,1|13,2|17,1|18,2|19,1|35,2:299.43:326.675,113.385:0.0,6.05764:5.30546e-27,3.70236e-14,1.0
+chr1	6961641	.	AAGAAAAAAGAAAAAAGAAAAAAGAAAA	.	.	.	END=6961668;RU=aagaaaa;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.87995:4,4:1-4,1-4:7,22,0,0:4,7:NULL:235.531:366.612,131.36:0.650759,0.650759:6.73077e-21,0.113659,0.886439	0/0:30:0.999069:4,4:4-4,4-4:15,15,0,0:4,15:NULL:201.791:326.675,113.385:0.0,0.0:9.2e-44,0.00088725,0.999118
+chr1	6967994	.	TAATAATAATAA	.	.	.	END=6968005;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:4,4:4-4,4-4:20,12,0,0:4,20:NULL:189.935:366.612,131.36:0.0,0.0:0.0,7.90063e-06,0.999994	0/0:25:0.999557:4,4:4-4,4-4:15,10,0,0:4,15:NULL:149.73:326.675,113.385:0.0,0.0:7.03689e-40,0.000286317,0.999713
+chr1	6969238	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6969285;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.890333:25,25:21-25,21-25:8,11,0,12:25,8:4,1|7,1|8,4|10,2|11,1|17,2|21,1:240.234:366.612,131.36:1.97147,1.97147:2.2967e-14,0.0600529,0.940036	0/0:47:0.66372:24,24:23-24,23-24:5,21,0,20:24,5:4,1|6,2|9,1|11,1|12,2|13,1|14,5|15,3|17,1|20,1|21,1|23,1:371.431:326.675,113.385:0.439006,0.439006:1.94957e-06,0.16676,0.83331
+chr1	6970340	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6970399;RU=ag;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0794809:21,21:16-25,16-25:2,9,0,0:21,2:NULL:102.005:366.612,131.36:3.59565,3.59565:1.0,0.0,0.0	0/0:28:0.484082:30,30:29-30,29-30:4,12,0,11:30,4:6,1|7,1|9,1|10,1|12,3|18,1|22,1|23,1|30,1:220.422:326.675,113.385:0.414188,0.414188:1.43804e-12,0.213388,0.786655
+chr1	6970529	.	AGACAGACAGAC	AGACAGACAGACAGAC	.	.	END=6970540;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.165059:3,4:1-4,1-4:0,22,0,0:NULL:NULL:217.65:366.612,131.36:0.696456,0.905169:0.0883328,0.445598,0.466221	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:168.514:326.675,113.385:0.0,0.0:0.0,4.77189e-06,0.999995
+chr1	6974307	.	ACACACACACAC	.	.	.	END=6974318;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997981:6,6:6-6,6-6:12,18,0,4:6,12:4,1|5,3:247.705:366.612,131.36:0.0,0.0:2.70056e-25,0.000648585,0.999355	0/0:19:0.92277:6,6:6-7,6-7:7,9,0,2:6,7:5,2:129.578:326.675,113.385:0.486863,0.486863:8.90486e-15,0.0332825,0.966779
+chr1	6978082	.	ATTTATTTATTTATTT	.	.	.	END=6978097;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999585:4,4:4-4,4-4:15,13,0,0:4,15:NULL:178.159:366.612,131.36:0.0,0.0:3e-45,0.000318068,0.999683	0/0:25:0.999606:4,4:4-4,4-4:15,10,0,0:4,15:NULL:154.043:326.675,113.385:0.0,0.0:3e-45,0.000300969,0.999704
+chr1	6979840	.	TTCATTCATTCA	.	.	.	END=6979851;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999935:3,3:3-3,3-3:17,10,0,0:3,17:NULL:155.607:366.612,131.36:0.0,0.0:0.0,3.22506e-05,0.999971	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:165.684:326.675,113.385:0.0,0.0:0.0,3.1439e-06,1.0
+chr1	6981484	.	TGTCTGTCTGTCTGTC	.	.	.	END=6981499;RU=tgtc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:4,4:4-4,4-4:44,11,0,2:4,44:3,2:283.345:366.612,131.36:0.0,0.0:0.0,2.90605e-13,1.0	0/0:60:1.0:4,4:4-4,4-4:32,19,0,9:4,32:2,1|3,8:361.317:326.675,113.385:0.0,0.0:0.0,7.5252e-10,1.0
+chr1	6982427	.	TTGTTTGTTTGTTTGT	.	.	.	END=6982442;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:30,13,0,4:4,30:2,1|3,3:265.948:366.612,131.36:0.0,0.0:0.0,3.12693e-09,1.0	0/0:48:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,3:271.065:326.675,113.385:0.0,0.0:0.0,1.84623e-09,1.0
+chr1	6982601	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6982652;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.542982:12,12:11-12,11-12:11,20,0,5:11,3|12,8:4,1|5,1|6,1|8,1|9,1:272.772:366.612,131.36:0.45695,0.45695:1.0,0.0,0.0	0/2:28:0.312785:26,39:24-27,24-39:3,6,0,17:26,3:7,1|8,2|10,1|12,1|15,2|16,1|17,2|18,1|24,3|25,2|39,1:210.08:326.675,113.385:0.517131,6.22137:8.48768e-11,0.000485426,0.999515
+chr1	6983427	.	GAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGA	.	.	END=6983442;RU=ga;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0292991:9,9:9-14,9-14:0,7,0,0:NULL:NULL:66.6014:366.612,131.36:1.08487,1.08487:0.0,0.0,1.0	0/0:23:0.929127:8,8:7-8,7-8:15,8,0,0:7,2|8,13:NULL:140.313:326.675,113.385:0.431574,0.431574:5.41404e-20,0.0708413,0.929253
+chr1	6985748	.	AATCAATCAATCAATCAATCAATCAATC	AATCAATCAATCAATC	.	.	END=6985775;RU=aatc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0496217:4,4:2-5,2-5:0,13,0,2:NULL:2,1|4,1:132.329:366.612,131.36:0.874544,0.874544:0.610375,0.347611,0.0421121	0/0:56:1.0:7,7:7-7,7-7:33,14,0,9:7,33:3,2|4,2|5,2|6,3:328.098:326.675,113.385:0.0,0.0:0.0,3.53258e-10,1.0
+chr1	6985795	.	AACAACAACAACAACAAC	.	.	.	END=6985812;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999876:6,6:5-6,5-6:17,16,0,0:6,17:NULL:214.345:366.612,131.36:0.236383,0.236383:1.7e-44,8.97379e-05,0.999911	0/0:50:1.0:6,6:6-6,6-6:34,14,0,2:6,34:4,2:280.867:326.675,113.385:0.0,0.0:0.0,3.42017e-10,1.0
+chr1	6986592	.	AAACAAACAAACAAAC	AAACAAACAAAC	.	.	END=6986607;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.095574:3,3:1-4,1-4:0,14,0,2:NULL:3,2:145.263:366.612,131.36:0.896573,0.896573:0.27164,0.550752,0.177626	0/0:33:0.998937:4,4:4-4,4-4:13,17,0,3:4,13:2,1|3,2:226.162:326.675,113.385:0.0,0.0:7.04477e-36,0.000588515,0.999415
+chr1	6987484	.	AAGAAAGAAAGA	.	.	.	END=6987495;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.408:366.612,131.36:0.0,0.0:0.0,1.80572e-06,1.0	0/0:26:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:128.281:326.675,113.385:0.0,0.0:0.0,2.64797e-06,1.0
+chr1	6988550	.	TAAATAAATAAA	.	.	.	END=6988561;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999939:3,3:3-3,3-3:17,8,0,0:3,17:NULL:148.37:366.612,131.36:0.0,0.0:0.0,3.19832e-05,0.999971	0/0:24:1.00001:3,3:3-3,3-3:21,3,0,0:3,21:NULL:111.913:326.675,113.385:0.0,0.0:0.0,2.54549e-06,1.0
+chr1	6988683	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=6988726;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.021606:9,9:1-11,1-11:0,7,0,2:NULL:8,1|9,1:82.6237:366.612,131.36:3.94562,3.94562:0.459313,0.48336,0.0574912	0/0:32:0.467214:11,11:9-11,9-11:13,12,0,7:9,2|11,11:3,1|6,2|7,1|8,1|10,2:229.771:326.675,113.385:0.999559,0.999559:5.65804e-20,0.53254,0.467569
+chr1	6988729	.	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	.	.	END=6988989;RU=cctttcttc;PERIOD=9;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0270839:9,9:1-10,1-10:0,4,0,2:NULL:8,1|9,1:49.0823:366.612,131.36:3.8178,3.8178:1.0,0.0,0.0	2/3:74:0.229205:13,44:10-19,40-49:0,5,45,24:NULL:4,4|5,1|6,3|7,3|8,2|9,3|10,5|11,1|12,1|13,1:532.764:326.675,113.385:1.94191,2.30908:2.71327e-26,1.0,2.09857e-20
+chr1	6988990	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=6989021;RU=cttt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0460909:12,12:12-15,12-15:0,8,0,3:NULL:3,2|7,1:99.5242:366.612,131.36:1.27204,1.27204:0.0,0.0,1.0	0/0:52:1.00001:8,8:4-8,4-8:23,14,0,14:8,23:3,2|4,5|5,2|6,1|7,4:324.178:326.675,113.385:0.780108,0.780108:0.0,4.11433e-07,1.0
+chr1	6994475	.	CTGCTGCTGCTG	.	.	.	END=6994486;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.992411:4,4:4-4,4-4:11,14,0,0:4,11:NULL:170.899:366.612,131.36:0.0,0.0:1.1156e-33,0.00521109,0.994799	0/0:43:1.0:4,4:4-4,4-4:24,19,0,0:4,24:NULL:271.361:326.675,113.385:0.0,0.0:0.0,1.08504e-06,1.0
+chr1	6996371	.	AATAATAATAATAATAAT	.	.	.	END=6996388;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999768:6,6:6-6,6-6:16,12,0,0:6,16:NULL:180.067:366.612,131.36:0.0,0.0:8.38304e-39,0.000169845,0.999833	0/0:42:1.0:6,6:2-6,2-6:26,11,0,4:6,26:5,4:232.728:326.675,113.385:1.24611,1.24611:0.0,5.89955e-08,1.0
+chr1	6996545	.	AAGAAGAAGAAGAAG	.	.	.	END=6996559;RU=aag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994013:5,5:5-5,5-5:11,12,0,2:5,11:3,1|5,1:174.922:366.612,131.36:0.0,0.0:2.00511e-39,0.00311578,0.996891	0/0:34:1.0:5,5:5-5,5-5:26,6,0,2:5,26:4,1|5,1:173.389:326.675,113.385:0.0,0.0:0.0,3.43247e-08,1.0
+chr1	6998981	.	AAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAAT	.	.	END=6998995;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.997585:5,5:5-5,5-5:13,14,0,0:5,13:NULL:187.766:366.612,131.36:0.0,0.0:0.0,0.000720986,0.99928	0/0:24:0.999132:3,3:3-3,3-3:13,9,0,2:3,13:2,2:142.538:326.675,113.385:0.0,0.0:6e-45,0.000369236,0.999636
+chr1	7000338	.	AATAAATAAATAAATAAATAAATA	AATA	.	.	END=7000361;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0780744:1,1:1-3,1-3:0,14,0,0:NULL:NULL:128.907:366.612,131.36:0.40047,0.40047:0.578545,0.378725,0.0428552	0/0:28:0.999853:6,6:6-6,6-6:16,8,0,4:6,16:3,1|4,1|5,2:169.898:326.675,113.385:0.0,0.0:4.152e-42,6.63619e-05,0.999934
+chr1	7002437	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7002468;RU=ga;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:31:0.98158:16,17:15-17,15-17:8,19,0,3:16,4|17,4:6,1|7,1|14,1:246.594:366.612,131.36:0.342408,0.451337:8.76787e-11,0.0012311,0.998771	0/0:36:0.731673:16,16:12-16,12-16:17,17,0,0:15,4|16,13:NULL:248.743:326.675,113.385:1.0297,1.0297:1.31245e-14,0.268042,0.731961
+chr1	7002484	.	GAAAGGAAAGGAAAG	.	.	.	END=7002498;RU=gaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:251.333:366.612,131.36:0.0,0.0:0.0,2.95141e-07,1.0	0/0:34:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:213.569:326.675,113.385:0.0,0.0:0.0,1.18702e-05,0.999987
+chr1	7003509	.	TATATATATATA	.	.	.	END=7003520;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.994474:6,6:6-6,6-6:12,18,0,0:6,12:NULL:217.202:366.612,131.36:0.0,0.0:2.94885e-21,0.00378633,0.996224	0/0:25:0.996778:6,6:6-6,6-6:12,13,0,0:6,12:NULL:167.642:326.675,113.385:0.0,0.0:1.43452e-21,0.00203514,0.997973
+chr1	7004299	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7004318;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:228.653:366.612,131.36:0.0,0.0:0.0,7.67878e-06,0.999994	0/0:30:0.999979:4,4:3-4,3-4:17,9,0,3:4,17:3,3:174.62:326.675,113.385:0.35561,0.35561:0.0,1.85123e-05,0.999985
+chr1	7004803	.	CACACACACACACACACACACACACACACA	.	.	.	END=7004832;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999293:15,15:15-15,15-15:15,19,0,14:15,15:4,1|7,1|10,2|11,4|12,2|14,4:356.714:366.612,131.36:0.0,0.0:2.76952e-21,0.000211699,0.999789	0/0:58:0.706049:15,15:14-15,14-15:16,20,0,22:14,4|15,12:5,4|6,4|7,2|8,2|9,1|10,4|11,1|12,1|14,3:434.637:326.675,113.385:0.442564,0.442564:8.53683e-14,0.293692,0.706312
+chr1	7005829	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=7005885;RU=tgt;PERIOD=3;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:0.741956:19,19:17-20,17-20:10,26,0,18:18,2|19,8:4,1|5,1|6,3|10,2|13,2|14,2|16,2|17,3|18,1|19,1:432.146:366.612,131.36:0.775697,0.775697:9.4889e-20,0.252631,0.747375	0/0:41:0.997035:19,19:18-19,18-19:12,12,0,16:19,12:5,2|6,1|7,2|12,2|13,1|14,1|15,2|16,3|18,2:284.233:326.675,113.385:0.169767,0.169767:2.05796e-21,0.00117709,0.998829
+chr1	7006807	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7006830;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999794:6,6:6-6,6-6:15,11,0,7:6,15:3,1|4,2|5,4:211.852:366.612,131.36:0.0,0.0:0.0,0.000106426,0.999895	0/0:23:0.975827:6,6:6-6,6-6:8,10,0,5:6,8:2,1|4,2|5,2:156.199:326.675,113.385:0.0,0.0:1.54873e-27,0.0118326,0.988195
+chr1	7006964	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=7007007;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.979752:13,13:13-13,13-13:9,7,0,4:13,9:4,1|6,1|7,2:131.034:366.612,131.36:0.0,0.0:6.58584e-29,0.00497299,0.99504	0/0:17:0.758626:11,11:11-11,11-11:5,5,0,7:11,5:2,1|4,1|6,1|7,1|8,1|9,2:116.354:326.675,113.385:0.0990099,0.0990099:1.36893e-12,0.116742,0.88336
+chr1	7008700	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=7008763;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.497359:17,17:16-17,16-17:3,16,0,12:17,3:4,2|6,1|7,2|8,2|10,1|13,1|15,1|16,2:253.862:366.612,131.36:0.253975,0.253975:3.20725e-23,0.0799344,0.920163	0/0:22:0.508596:16,16:13-16,13-16:4,10,0,8:16,4:5,1|6,3|7,2|8,1|10,1:169.954:326.675,113.385:0.772658,0.772658:4.78346e-09,0.374145,0.625905
+chr1	7009944	.	AACAACAACAAC	.	.	.	END=7009955;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:4,4:4-4,4-4:24,6,0,0:4,24:NULL:146.992:366.612,131.36:0.0,0.0:0.0,4.95377e-07,1.0	0/0:16:0.994513:4,4:4-4,4-4:11,5,0,0:4,11:NULL:89.5565:326.675,113.385:0.0,0.0:6.90523e-37,0.0032162,0.996792
+chr1	7016143	.	ATGTTATGTTATGTT	.	.	.	END=7016157;RU=atgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:26,9,0,0:3,26:NULL:183.945:366.612,131.36:0.0,0.0:0.0,1.15585e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:31,19,0,0:3,31:NULL:302.422:326.675,113.385:0.0,0.0:0.0,2.5526e-09,1.0
+chr1	7018592	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7018643;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.518763:14,14:14-15,14-15:11,11,0,8:14,9|15,2:5,1|6,1|9,1|12,2|13,3:214.581:366.612,131.36:0.594554,0.594554:1.0,0.0,0.0	2/3:49:0.975679:25,28:25-34,28-32:10,12,0,25:25,5|28,5:4,1|5,1|6,1|7,1|11,1|17,2|18,1|20,4|21,2|22,2|23,3|24,2|25,2|27,1|32,1:382.265:326.675,113.385:3.4316,1.90016:1.06017e-15,0.977485,0.022559
+chr1	7022856	.	ACACACACACACACACACACACAC	ACACACACACAC	.	.	END=7022879;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:38:0.94614:6,12:4-12,12-12:10,19,0,8:6,2|12,8:4,1|6,1|9,1|10,4|11,1:294.203:366.612,131.36:2.66025,0.0:8.80497e-17,0.951905,0.0481708	0/0:25:0.830934:12,12:10-12,10-12:6,9,0,8:12,6:4,1|5,1|6,2|7,1|9,1|10,1|11,1:174.926:326.675,113.385:0.831212,0.831212:1.38565e-12,0.094323,0.905777
+chr1	7022880	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7022935;RU=ag;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:35:0.377048:22,34:22-22,18-35:9,20,0,3:22,9:5,1|13,1|34,1:259.569:366.612,131.36:0.278639,6.38699:7.71756e-05,0.999925,8.7181e-26	0/2:25:0.217122:28,32:26-30,26-32:3,11,0,9:28,3:6,1|8,1|18,1|21,1|23,1|26,2|27,1|29,1:192.037:326.675,113.385:0.717258,1.5095:5.02768e-11,0.00427917,0.995733
+chr1	7023312	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=7023410;RU=ctt;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.0671344:25,29:23-31,25-31:0,16,0,19:NULL:4,1|9,2|10,1|13,1|14,1|15,1|16,2|17,1|20,1|21,1|22,2|23,1|24,2|26,1|29,1:296.96:366.612,131.36:2.70302,2.1949:1.0,0.0,0.0	3/3:31:0.0272976:34,34:11-34,11-34:0,15,0,15:NULL:6,1|7,2|13,2|15,1|18,1|20,1|21,1|22,1|23,1|28,1|32,1|33,1|34,1:257.589:326.675,113.385:10.0786,10.0786:9.48561e-16,0.620223,0.379835
+chr1	7025016	.	AACCAACCAACC	.	.	.	END=7025027;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:226.678:366.612,131.36:0.0,0.0:0.0,7.01753e-06,0.999994	0/0:35:1.00001:3,3:3-3,3-3:20,12,0,3:3,20:2,3:205.946:326.675,113.385:0.0,0.0:0.0,3.0456e-06,1.0
+chr1	7026416	.	TTTATTTTATTTTAT	.	.	.	END=7026430;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999863:3,3:3-3,3-3:16,20,0,0:3,16:NULL:251.656:366.612,131.36:0.0,0.0:0.0,0.000104511,0.999896	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:168.583:326.675,113.385:0.0,0.0:0.0,3.49234e-07,1.0
+chr1	7028391	.	AATAAATAAATA	.	.	.	END=7028402;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.735:366.612,131.36:0.0,0.0:0.0,9.56457e-07,1.0	0/0:43:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:243.642:326.675,113.385:0.0,0.0:0.0,1.91427e-08,1.0
+chr1	7028876	.	TTTATTTATTTA	.	.	.	END=7028887;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999966:3,3:3-3,3-3:18,11,0,0:3,18:NULL:172.431:366.612,131.36:0.0,0.0:0.0,2.71628e-05,0.999972	0/0:29:0.999871:3,3:3-3,3-3:17,12,0,0:3,17:NULL:186.491:326.675,113.385:0.0,0.0:0.0,9.72933e-05,0.999903
+chr1	7029276	.	ACACACACACACACACACACACAC	.	.	.	END=7029299;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999467:12,12:12-13,12-13:15,19,0,10:12,15:7,3|8,1|10,2|11,4:313.42:366.612,131.36:0.21692,0.21692:3.2571e-23,0.000121464,0.99988	0/0:56:0.999972:12,12:12-14,12-14:18,20,0,15:12,18:5,3|6,2|7,2|9,4|10,2|11,2:383.754:326.675,113.385:0.617999,0.617999:4.03621e-28,1.31504e-05,0.999987
+chr1	7029315	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7029344;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999899:6,6:6-6,6-6:17,16,0,4:6,17:2,2|3,1|5,1:243.699:366.612,131.36:0.0,0.0:0.0,7.21659e-05,0.999932	0/0:45:1.0:6,6:6-6,6-6:24,17,0,4:6,24:2,1|3,1|5,2:282.108:326.675,113.385:0.0,0.0:0.0,3.38642e-07,1.0
+chr1	7032756	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=7032799;RU=aata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.970244:11,11:11-11,11-11:7,14,0,14:11,7:3,1|5,4|6,1|7,2|8,3|9,1|10,2:257.761:366.612,131.36:0.0,0.0:1.68122e-16,0.0127223,0.987305	0/0:30:0.989657:11,11:11-15,11-15:10,12,0,7:11,10:6,3|7,2|10,2:198.339:326.675,113.385:1.77026,1.77026:2.88596e-22,0.00340046,0.99661
+chr1	7032984	.	ACAAAAAAACAAAAAAACAAAAAA	.	.	.	END=7033007;RU=acaaaaaa;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.975755:3,3:3-3,3-3:9,14,0,0:3,9:NULL:160.968:366.612,131.36:0.19802,0.19802:2.95058e-28,0.0203616,0.97968	0/0:25:0.99989:3,3:3-3,3-3:16,6,0,3:3,16:2,3:138.409:326.675,113.385:0.0,0.0:0.0,4.93539e-05,0.999955
+chr1	7033046	.	AGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC,AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	END=7033061;RU=agac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:27:0.276065:4,17:3-4,3-17:13,10,0,3:3,6|4,7:13,2|14,1:202.123:366.612,131.36:0.412766,5.41922:4.18022e-24,6.21541e-06,0.999995	0/1:33:0.338812:4,14:4-4,4-14:22,8,0,3:4,22:7,1|10,1|14,1:200.432:326.675,113.385:0.0,3.25928:0.0,5.07546e-22,1.0
+chr1	7033993	.	TATATATATATA	TATATATATATATATATATATATATATATATATATATA	.	.	END=7034004;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0159096:19,19:1-20,1-20:0,5,0,3:NULL:9,1|12,1|19,1:72.9907:366.612,131.36:5.54252,5.54252:1.41404e-22,0.182165,0.817898	0/0:29:0.998488:6,6:6-6,6-6:13,16,0,0:6,13:NULL:199.889:326.675,113.385:0.0,0.0:8.53176e-25,0.000960543,0.999043
+chr1	7035493	.	CACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACA	.	.	END=7035530;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.876971:17,19:16-18,18-19:9,9,0,12:16,3|17,3|19,3:6,2|7,2|8,1|9,1|11,1|16,1|17,1|18,3:231.892:366.612,131.36:0.693494,0.382696:0.000484166,0.999074,0.000449598	0/0:34:0.607126:19,19:18-19,18-19:14,10,0,10:18,4|19,10:7,1|8,1|10,1|11,2|12,1|13,2|17,1|19,1:245.262:326.675,113.385:0.481803,0.481803:1.87697e-18,0.391868,0.608193
+chr1	7035536	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7035569;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.924009:14,16:14-16,16-16:8,13,0,3:14,3|16,5:5,1|8,1|10,1:182.436:366.612,131.36:0.951732,0.278639:0.996528,0.00347855,1.03467e-06	0/0:33:0.572888:17,17:17-18,17-18:20,10,0,3:16,3|17,14|18,3:5,1|8,1|13,1:222.459:326.675,113.385:0.475866,0.475866:2.53131e-18,0.000967349,0.999036
+chr1	7038709	.	AAATAAATAAAT	AAATAAATAAATAAATAAAT	.	.	END=7038720;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:21:1.0:3,5:3-3,5-5:10,9,0,2:3,7|5,3:5,2:141.417:366.612,131.36:0.0,0.0:1e-45,3.77514e-20,1.0	0/0:8:0.928445:3,3:3-3,3-3:7,1,0,0:3,7:NULL:37.2692:326.675,113.385:0.0,0.0:7.60169e-21,0.0294883,0.970568
+chr1	7038726	.	TAAATAAATAAATAAATAAATAAATAAATAAATAAA	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	.	.	END=7038761;RU=taaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.502446:11,11:8-11,8-11:4,7,0,0:11,4:NULL:80.8551:366.612,131.36:0.630406,0.630406:2.8178e-14,0.129084,0.871013	0/0:9:0.726846:9,9:9-9,9-9:5,2,0,2:9,5:3,1|5,1:53.6287:326.675,113.385:0.0,0.0:5.87215e-13,0.144436,0.855649
+chr1	7039465	.	TATATATATATATATATATATATATATATATA	TATATA,TATATATATATA	.	.	END=7039496;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:14:0.0164109:3,6:1-8,1-8:0,14,0,0:NULL:NULL:142.434:366.612,131.36:2.00357,2.14927:0.721099,0.264067,0.0148589	0/0:14:0.265955:16,16:4-16,4-16:5,5,0,0:16,5:NULL:74.2867:326.675,113.385:3.94882,3.94882:4.58141e-07,0.622396,0.377661
+chr1	7046294	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAATAAATAAAT	.	.	END=7046333;RU=aaat;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.993317:8,8:8-8,8-8:11,19,0,4:8,11:2,1|4,1|5,1|7,1:243.68:366.612,131.36:0.0,0.0:0.998276,0.00172933,1.72211e-26	0/0:54:0.999995:10,10:9-10,9-10:19,23,0,11:10,19:3,1|4,2|6,2|7,1|8,3|9,2:380.597:326.675,113.385:0.236383,0.236383:0.0,1.23677e-05,0.999987
+chr1	7046658	.	AATAAATAAATAAATA	AATA	.	.	END=7046673;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0869115:1,1:1-4,1-4:0,13,0,0:NULL:NULL:133.022:366.612,131.36:1.30693,1.30693:0.464361,0.44253,0.0932569	0/0:26:0.971748:4,4:4-4,4-4:9,17,0,0:4,9:NULL:183.662:326.675,113.385:0.0,0.0:7.18699e-20,0.0220878,0.977957
+chr1	7047632	.	ATTATTATTATT	.	.	.	END=7047643;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.97436:4,4:4-4,4-4:9,12,0,0:4,9:NULL:149.826:366.612,131.36:0.0,0.0:1.857e-26,0.0166801,0.983356	0/0:23:0.999909:4,4:4-4,4-4:17,6,0,0:4,17:NULL:120.143:326.675,113.385:0.0,0.0:0.0,5.72559e-05,0.999942
+chr1	7047891	.	TAATATAATATAATATAATATAATA	TAATATAATATAATATAATATAATATAATATAATA	.	.	END=7047915;RU=taata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998981:7,7:7-8,7-8:14,17,0,4:7,14:3,1|4,1|5,2:245.806:366.612,131.36:0.382696,0.382696:0.0,0.000136251,0.999865	0/0:26:0.997731:5,5:5-5,5-5:12,10,0,4:5,12:2,1|3,1|4,2:170.786:326.675,113.385:0.0,0.0:5.98175e-27,0.00149521,0.998511
+chr1	7050067	.	AAATAAATAAATAAAT	.	.	.	END=7050082;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997876:4,4:4-4,4-4:13,9,0,2:4,13:3,2:150.223:366.612,131.36:0.0,0.0:4.01234e-40,0.000994216,0.999012	0/0:29:0.999941:4,4:2-4,2-4:17,8,0,2:4,17:3,2:157.568:326.675,113.385:0.694341,0.694341:0.0,2.86342e-05,0.999972
+chr1	7052312	.	TTTCTTTCTTTC	.	.	.	END=7052323;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999977:3,3:3-3,3-3:17,19,0,2:3,17:2,2:259.885:366.612,131.36:0.0,0.0:0.0,2.67102e-05,0.999972	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.089:326.675,113.385:0.0,0.0:0.0,9.44406e-08,1.0
+chr1	7068379	.	CCCCCCACCCCCCACCCCCCA	CCCCCCA	.	.	END=7068399;RU=cccccca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.599661:3,3:1-3,1-3:4,7,0,0:3,4:NULL:76.9325:366.612,131.36:0.339533,0.339533:3.80433e-10,0.225051,0.774984	1/1:4:0.0466103:1,1:1-3,1-3:0,3,0,0:NULL:NULL:26.5653:326.675,113.385:0.913899,0.913899:0.162367,0.48561,0.352167
+chr1	7069168	.	TGTGTGTGTGTGTG	TGTGTGTGTGTG,TGTGTGTGTGTGTGTG	.	.	END=7069181;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.734558:6,8:6-8,8-8:20,13,0,0:6,2|8,18:NULL:214.145:366.612,131.36:0.98891,0.0:0.0,0.734637,0.265363	0/0:33:0.999851:7,7:6-7,6-7:16,14,0,2:7,16:6,2:203.023:326.675,113.385:0.345543,0.345543:3.63253e-33,8.08638e-05,0.999919
+chr1	7069209	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7069246;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.583046:19,19:16-20,16-20:5,17,0,3:19,5:9,1|10,1|17,1:203.784:366.612,131.36:1.39016,1.39016:2.35734e-07,0.292289,0.707716	0/0:40:0.993181:19,19:19-19,19-19:15,12,0,12:18,2|19,13:7,1|10,1|11,2|12,1|13,2|15,2|16,1|17,2:271.882:326.675,113.385:0.139319,0.139319:9.11502e-17,0.00584253,0.994173
+chr1	7071018	.	TTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTA	.	.	END=7071053;RU=tta;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999002:10,10:10-10,10-10:13,23,0,11:10,13:4,3|5,1|6,2|7,1|8,1|9,3:339.761:366.612,131.36:0.0,0.0:0.999697,0.00030462,1.39775e-29	0/0:26:0.979369:12,12:12-12,12-12:9,12,0,5:12,9:5,1|9,1|10,1|11,2:189.892:326.675,113.385:0.0,0.0:7.30704e-17,0.0105619,0.989462
+chr1	7072179	.	TTTGTTTGTTTG	.	.	.	END=7072190;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.00001:3,3:3-3,3-3:20,5,0,2:3,20:2,2:136.258:366.612,131.36:0.0,0.0:0.0,3.13871e-06,1.0	0/0:52:1.0:3,3:3-3,3-3:37,15,0,0:3,37:NULL:289.246:326.675,113.385:0.0,0.0:0.0,4.57678e-11,1.0
+chr1	7086512	.	TCCTTCCTTCCT	.	.	.	END=7086523;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:30,27,0,0:3,30:NULL:354.947:366.612,131.36:0.0,0.0:0.0,8.16899e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:19,15,0,0:3,19:NULL:209.826:326.675,113.385:0.0,0.0:0.0,9.0128e-06,0.999994
+chr1	7087714	.	TATATATATATATATATA	TATATA,TATATATATATATATA	.	.	END=7087731;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999984:3,3:3-3,3-3:19,20,0,0:3,19:NULL:257.181:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	2/0:14:0.933757:8,9:8-9,9-9:11,3,0,0:8,3|9,8:NULL:78.6639:326.675,113.385:0.478946,0.0:1.99405e-08,0.934517,0.0655771
+chr1	7088366	.	AAACAAACAAACAAAC	.	.	.	END=7088381;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:27,18,0,3:4,27:2,1|3,2:298.647:366.612,131.36:0.0,0.0:0.0,1.04635e-07,1.0	0/0:34:1.0:4,4:4-4,4-4:23,8,0,2:4,23:2,1|3,1:183.097:326.675,113.385:0.139319,0.139319:0.0,4.63816e-07,1.0
+chr1	7089402	.	AGGAGGAGGAGG	.	.	.	END=7089413;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.999055:4,4:4-4,4-4:14,5,0,0:4,14:NULL:104.682:366.612,131.36:0.0,0.0:0.0,0.000531556,0.99947	0/0:23:0.999212:4,4:4-4,4-4:14,9,0,0:4,14:NULL:136.969:326.675,113.385:0.0,0.0:0.0,0.00055484,0.999447
+chr1	7091385	.	ATCATCATCATCATC	.	.	.	END=7091399;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:22,19,0,3:5,22:3,1|4,2:285.323:366.612,131.36:0.0,0.0:0.0,1.23723e-06,1.0	0/0:25:0.999985:5,5:5-5,5-5:18,7,0,0:5,18:NULL:140.115:326.675,113.385:0.0,0.0:0.0,1.96216e-05,0.99998
+chr1	7091399	.	CACCACCACCACCAC	.	.	.	END=7091413;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:5,5:5-5,5-5:21,18,0,3:5,21:4,3:272.157:366.612,131.36:0.0,0.0:0.0,2.06007e-06,1.0	0/0:24:0.999984:5,5:5-5,5-5:18,6,0,0:5,18:NULL:130.27:326.675,113.385:0.0,0.0:0.0,2.13014e-05,0.999979
+chr1	7097340	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7097369;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.266045:16,21:15-16,15-22:15,13,0,11:15,5|16,10:6,1|7,2|8,2|10,1|11,1|12,1|14,1|15,1|19,1:287.967:366.612,131.36:0.169767,2.39935:2.43486e-36,8.03973e-08,1.0	0/0:34:0.979289:15,15:14-15,14-15:12,12,0,9:14,2|15,10:7,1|9,2|10,1|12,1|13,1|14,2|15,1:238.408:326.675,113.385:0.352842,0.352842:2.76799e-20,0.016334,0.983702
+chr1	7097804	.	ATAATAATAATA	.	.	.	END=7097815;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.996042:4,4:4-4,4-4:12,13,0,0:4,12:NULL:164.437:366.612,131.36:0.0,0.0:3.65495e-28,0.00297296,0.997034	0/0:29:0.999954:4,4:4-4,4-4:17,8,0,4:4,17:3,3|4,1:169.671:326.675,113.385:0.0,0.0:0.0,1.21917e-05,0.999987
+chr1	7099389	.	ATTTATTTATTTATTTATTTATTT	.	.	.	END=7099412;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:6,6:6-6,6-6:26,19,0,3:6,26:2,1|5,2:293.598:366.612,131.36:0.0,0.0:0.0,7.89356e-08,1.0	0/0:26:0.99991:6,6:6-6,6-6:17,6,0,3:6,17:3,2|4,1:150.344:326.675,113.385:0.0,0.0:1.42e-42,5.46034e-05,0.999948
+chr1	7099628	.	TGTGTGTGTGTG	.	.	.	END=7099639;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:6,6:6-6,6-6:33,18,0,6:6,33:4,5|5,1:335.292:366.612,131.36:0.0,0.0:0.0,7.73598e-10,1.0	0/0:73:1.0:6,6:6-7,6-7:49,14,0,9:5,2|6,47:4,3|5,5|7,1:422.624:326.675,113.385:0.431574,0.431574:0.0,5.61873e-11,1.0
+chr1	7099942	.	ATGTATGTATGTATGTATGT	.	.	.	END=7099961;RU=atgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:5,5:5-5,5-5:19,18,0,3:5,19:2,2|4,1:261.311:366.612,131.36:0.0,0.0:0.0,1.01711e-05,0.999993	0/0:68:1.0:5,5:5-5,5-5:35,26,0,7:5,35:2,1|3,2|4,4:429.734:326.675,113.385:0.0,0.0:0.0,9.13639e-11,1.0
+chr1	7101482	.	TTGTTGTTGTTGTTG	.	.	.	END=7101496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999921:5,5:5-5,5-5:17,12,0,3:5,17:3,1|4,2:197.488:366.612,131.36:0.0,0.0:0.0,4.4001e-05,0.999957	0/0:39:1.0:5,5:5-5,5-5:25,11,0,3:5,25:4,3:224.371:326.675,113.385:0.0,0.0:0.0,7.60404e-08,1.0
+chr1	7101721	.	AACAACAACAAC	.	.	.	END=7101732;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:2-4,2-4:25,19,0,2:4,25:3,2:281.334:366.612,131.36:0.569802,0.569802:0.0,2.04694e-07,1.0	0/0:44:1.0:4,4:4-4,4-4:26,15,0,3:4,26:3,3:260.772:326.675,113.385:0.0,0.0:0.0,4.34561e-08,1.0
+chr1	7102309	.	CAACAACAACAACAACAA	.	.	.	END=7102326;RU=caa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.854997:6,6:6-6,6-6:6,17,0,2:6,6:5,2:191.637:366.612,131.36:0.0,0.0:2.48895e-15,0.0832395,0.916856	0/0:25:0.977648:6,6:6-6,6-6:9,14,0,2:6,9:4,1|5,1:178.927:326.675,113.385:0.0,0.0:7.69728e-23,0.0128845,0.987142
+chr1	7112567	.	TGCTTGCTTGCT	.	.	.	END=7112578;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.531923:3,3:1-3,1-3:4,11,0,0:3,4:NULL:119.182:366.612,131.36:0.851255,0.851255:8.10748e-13,0.289411,0.710593	0/0:4:0.610326:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.7523:326.675,113.385:0.0,0.0:3.60438e-13,0.15294,0.847136
+chr1	7112580	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC,TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=7112635;RU=tccc;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:10:0.0426785:10,10:9-12,9-12:0,9,0,0:NULL:NULL:84.7417:366.612,131.36:0.960855,0.960855:0.690324,0.283001,0.0267151	1/1:7:0.0395119:9,9:4-9,4-9:0,1,0,6:NULL:3,2|4,2|7,1|8,1:51.8568:326.675,113.385:1.05556,1.05556:1.0,0.0,0.0
+chr1	7112643	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7112706;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0678086:10,10:8-11,8-11:0,10,0,2:NULL:7,1|10,1:107.562:366.612,131.36:0.725953,0.725953:1.0,0.0,0.0	2/2:4:0.0231414:17,17:11-17,11-17:0,1,0,3:NULL:5,1|16,1|17,1:30.1058:326.675,113.385:2.17123,2.17123:1.44707e-15,0.562026,0.438073
+chr1	7114417	.	TATTTATTTATT	.	.	.	END=7114428;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,11,0,3:3,21:2,3:207.032:366.612,131.36:0.0,0.0:0.0,1.37851e-06,1.0	0/0:29:0.999531:3,3:3-3,3-3:14,12,0,3:3,14:2,3:194.42:326.675,113.385:0.0,0.0:0.0,0.000209233,0.999795
+chr1	7114880	.	GTTTGTTTGTTT	.	.	.	END=7114891;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.99997:3,3:3-3,3-3:18,20,0,0:3,18:NULL:249.412:366.612,131.36:0.0,0.0:0.0,3.72643e-05,0.999964	0/0:51:1.0:3,3:3-3,3-3:39,10,0,2:3,39:2,2:260.0:326.675,113.385:0.0,0.0:0.0,5.14724e-12,1.0
+chr1	7114905	.	TGCCTGCCTGCCTGCCTGCC	.	.	.	END=7114924;RU=tgcc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999735:5,5:5-5,5-5:15,21,0,4:5,15:2,1|3,1|4,2:277.064:366.612,131.36:0.0,0.0:0.0,0.000197653,0.999804	0/0:60:1.0:5,5:5-5,5-5:32,19,0,9:5,32:3,5|4,4:364.328:326.675,113.385:0.0,0.0:0.0,7.61377e-10,1.0
+chr1	7114923	.	CCTTCCTTCCTT	.	.	.	END=7114934;RU=cctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999925:3,3:3-3,3-3:17,18,0,0:3,17:NULL:228.78:366.612,131.36:0.0,0.0:0.0,7.08889e-05,0.999932	0/0:53:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:294.268:326.675,113.385:0.0,0.0:0.0,1.28063e-10,1.0
+chr1	7115852	.	CAACAACAACAA	.	.	.	END=7115863;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.995236:4,4:4-4,4-4:11,29,0,2:4,11:3,1|4,1:335.829:366.612,131.36:0.0,0.0:4.37565e-40,0.00359673,0.996413	0/0:38:1.00001:4,4:4-10,4-10:21,16,0,0:4,21:NULL:229.452:326.675,113.385:2.98215,2.98215:0.0,5.39507e-06,0.999995
+chr1	7115879	.	AACCAACCAACCAACCAACC	.	.	.	END=7115898;RU=aacc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.996785:5,5:5-5,5-5:12,25,0,2:5,12:2,1|4,1:301.208:366.612,131.36:0.0,0.0:4.2689e-36,0.00270055,0.997306	0/0:34:0.999855:5,5:5-5,5-5:16,15,0,3:5,16:2,2|4,1:224.039:326.675,113.385:0.0,0.0:0.0,0.000123741,0.999879
+chr1	7116409	.	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7116432;RU=ttg;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.00001:8,8:8-8,8-8:21,21,0,4:8,21:3,1|4,2|7,1:303.429:366.612,131.36:0.0,0.0:0.0,3.5402e-06,1.0	0/0:38:1.0:8,8:8-8,8-8:20,13,0,5:8,20:5,1|6,3|7,1:239.316:326.675,113.385:0.0,0.0:0.0,4.78065e-06,0.999995
+chr1	7117084	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=7117101;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999899:6,6:6-6,6-6:17,5,0,0:6,17:NULL:115.028:366.612,131.36:0.0,0.0:1e-45,7.1154e-05,0.999932	0/0:30:0.99988:6,6:6-6,6-6:16,11,0,3:6,16:5,3:187.085:326.675,113.385:0.0,0.0:4.64e-43,5.67073e-05,0.999947
+chr1	7117723	.	TTATTTATTTAT	.	.	.	END=7117734;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999944:3,3:3-3,3-3:17,19,0,0:3,17:NULL:241.297:366.612,131.36:0.0,0.0:0.0,4.02304e-05,0.999963	.
+chr1	7123652	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATATATATA	.	.	END=7123683;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0256018:10,10:10-17,10-17:0,12,0,0:NULL:NULL:105.881:366.612,131.36:2.26765,2.26765:0.487018,0.42469,0.0883901	2/2:4:0.0176259:14,14:14-16,14-16:0,2,0,0:NULL:NULL:18.051:326.675,113.385:0.668445,0.668445:0.262568,0.499919,0.237526
+chr1	7123681	.	ATAGATAGATAGATAG	.	.	.	END=7123696;RU=atag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.308041:4,4:1-6,1-6:3,13,0,0:4,3:NULL:127.107:366.612,131.36:1.2509,1.2509:1.57402e-06,0.425549,0.574539	0/0:8:0.467441:4,4:4-4,4-4:3,3,0,2:4,3:3,2:52.7516:326.675,113.385:0.139319,0.139319:7.90252e-07,0.195937,0.804113
+chr1	7127713	.	ATGCATGCATGC	.	.	.	END=7127724;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.998886:3,3:3-3,3-3:13,9,0,0:3,13:NULL:135.151:366.612,131.36:0.0,0.0:4e-45,0.000670271,0.999332	0/0:22:0.999502:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.86:326.675,113.385:0.0,0.0:0.0,0.000298726,0.999704
+chr1	7129508	.	GCCTGCCTGCCT	.	.	.	END=7129519;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.196:366.612,131.36:0.0,0.0:0.0,6.69502e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:188.359:326.675,113.385:0.0,0.0:0.0,8.97093e-07,1.0
+chr1	7129995	.	AGCAGCAGCAGC	.	.	.	END=7130006;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:23,24,0,2:4,23:3,2:327.467:366.612,131.36:0.0,0.0:0.0,7.46945e-07,1.0	0/0:54:1.0:4,4:4-4,4-4:40,14,0,0:4,40:NULL:287.299:326.675,113.385:0.0,0.0:0.0,8.80671e-12,1.0
+chr1	7138899	.	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC,CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	.	.	END=7138976;RU=cctctc;PERIOD=6;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.097887:10,12:10-13,10-13:0,9,0,12:NULL:3,2|4,2|5,1|6,2|7,2|8,1|10,2:167.19:366.612,131.36:1.17651,1.02837:0.410451,0.467083,0.122569	0/0:41:0.611322:13,13:11-13,11-13:4,15,0,22:13,4:3,2|4,5|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2:308.531:326.675,113.385:0.474835,0.474835:6.11111e-08,0.261255,0.738746
+chr1	7139015	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7139054;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.777986:24,24:16-25,16-25:6,14,0,7:24,6:11,1|13,1|18,1|21,2|22,1|23,1:211.599:366.612,131.36:4.19713,4.19713:0.0,0.0157563,0.984278	0/1:52:0.615788:20,22:20-20,19-22:21,16,0,15:19,6|20,15:7,1|9,1|10,1|12,1|14,4|16,1|17,2|19,3|22,1:384.84:326.675,113.385:0.0,1.01136:3.32272e-17,0.000540725,0.999462
+chr1	7139855	.	CAACAACAACAA	.	.	.	END=7139866;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:25,18,0,4:4,25:3,4:286.567:366.612,131.36:0.0,0.0:0.0,1.39598e-07,1.0	0/0:53:1.0:4,4:4-4,4-4:29,22,0,2:4,29:3,2:332.281:326.675,113.385:0.0,0.0:0.0,8.94474e-09,1.0
+chr1	7141910	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7141955;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:68:0.944554:19,19:19-20,19-20:8,31,0,27:19,8:5,1|6,1|7,1|8,1|9,2|10,6|11,2|12,2|13,1|14,2|15,5|19,3:539.829:366.612,131.36:0.358902,0.358902:0.995439,0.00457489,4.49258e-22	0/0:78:0.828414:23,23:20-23,20-23:9,33,0,35:22,2|23,7:5,2|6,2|8,2|9,5|10,2|12,1|13,3|14,9|16,1|18,2|19,2|20,1|21,1|22,1|23,1:617.134:326.675,113.385:1.08749,1.08749:7.09369e-14,0.154714,0.845364
+chr1	7142903	.	TTTATTTATTTA	.	.	.	END=7142914;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999657:3,3:3-3,3-3:15,3,0,0:3,15:NULL:88.4566:366.612,131.36:0.0,0.0:4e-45,0.000127952,0.999873	0/0:25:1.00001:3,3:3-4,3-4:21,3,0,0:3,21:NULL:110.108:326.675,113.385:0.298675,0.298675:0.0,2.16394e-06,1.0
+chr1	7149749	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=7149768;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999981:10,10:10-10,10-10:19,11,0,5:10,19:4,1|6,1|7,1|9,2:217.879:366.612,131.36:0.0,0.0:1.71733e-30,1.14603e-05,0.999988	0/0:61:1.0:10,10:10-10,10-10:33,18,0,9:10,33:5,2|6,2|7,2|9,3:372.271:326.675,113.385:0.0,0.0:0.0,1.25285e-09,1.0
+chr1	7150526	.	CAGCCAGCCAGC	.	.	.	END=7150537;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:217.341:366.612,131.36:0.0,0.0:0.0,2.87344e-06,1.0	0/0:55:1.0:3,3:3-3,3-3:42,13,0,0:3,42:NULL:281.387:326.675,113.385:0.0,0.0:0.0,1.12619e-12,1.0
+chr1	7151580	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7151625;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.907183:22,22:21-23,21-23:13,20,0,7:21,3|22,10:5,1|8,1|10,1|13,1|15,1|17,1|22,1:305.099:366.612,131.36:0.38423,0.38423:0.996535,0.00347349,1.51364e-09	1/0:46:0.948189:22,23:21-23,22-23:10,15,0,21:21,2|22,3|23,5:5,2|7,1|8,1|11,2|12,2|13,2|14,3|15,1|17,1|19,1|20,1|22,4:357.742:326.675,113.385:0.554102,0.317759:0.00154081,0.961704,0.0368281
+chr1	7152237	.	GTTGTTGTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=7152266;RU=gtt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999992:10,10:10-10,10-10:19,15,0,11:10,19:4,2|5,3|7,1|8,2|9,3:308.082:366.612,131.36:0.0,0.0:4.55911e-36,1.42231e-05,0.999987	0/0:42:1.0:10,10:10-10,10-10:24,11,0,7:10,24:3,1|6,1|8,2|9,3:248.698:326.675,113.385:0.0,0.0:0.0,2.10796e-07,1.0
+chr1	7157339	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7157358;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.946256:4,4:1-4,1-4:8,27,0,4:4,8:2,1|3,3:311.435:366.612,131.36:0.5093,0.5093:4.82258e-26,0.0315994,0.968457	0/0:31:0.999938:4,4:4-4,4-4:17,12,0,2:4,17:3,2:192.613:326.675,113.385:0.0,0.0:0.0,4.32609e-05,0.999957
+chr1	7157442	.	TTTTGGTTTTTGGTTTTTGGT	.	.	.	END=7157462;RU=ttttggt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:235.917:366.612,131.36:0.0,0.0:0.0,1.75816e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:175.786:326.675,113.385:0.0,0.0:0.0,8.52949e-06,0.999994
+chr1	7157813	.	CAAACAAACAAACAAA	.	.	.	END=7157828;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999842:4,4:4-4,4-4:16,10,0,3:4,16:3,3:172.962:366.612,131.36:0.0,0.0:0.0,6.26255e-05,0.99994	0/0:52:1.0:4,4:4-4,4-4:23,24,0,5:4,23:3,5:345.664:326.675,113.385:0.0,0.0:0.0,5.28929e-07,1.0
+chr1	7164237	.	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	.	.	END=7164331;RU=tctct;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.0866162:21,21:20-23,20-23:0,17,0,24:NULL:2,2|5,1|6,1|7,3|9,4|10,4|11,1|12,1|13,1|16,1|17,1|18,2|19,1|21,1:332.371:366.612,131.36:1.2242,1.2242:0.0,0.0,1.0	0/0:40:0.134004:19,19:11-19,11-19:2,20,0,17:19,2:3,2|5,1|6,1|7,3|8,1|9,1|10,1|12,1|13,1|14,2|15,2|18,1:316.316:326.675,113.385:2.63675,2.63675:0.000196628,0.75379,0.246027
+chr1	7165649	.	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	.	END=7165672;RU=tttgtt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999941:4,4:4-4,4-4:17,14,0,4:4,17:3,4:228.493:366.612,131.36:0.0,0.0:0.0,3.76231e-05,0.999964	0/0:38:0.997965:4,4:4-4,4-4:11,22,0,5:4,11:3,5:280.981:326.675,113.385:0.0,0.0:2.16762e-36,0.00154586,0.998459
+chr1	7167675	.	TTTGTTTGTTTG	.	.	.	END=7167686;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99977:3,3:3-3,3-3:15,10,0,2:3,15:2,2:168.111:366.612,131.36:0.0,0.0:0.0,9.43e-05,0.999909	0/0:20:0.999928:3,3:3-3,3-3:17,3,0,0:3,17:NULL:92.8925:326.675,113.385:0.0,0.0:0.0,3.49392e-05,0.999964
+chr1	7172621	.	AAAAGAAAAGAAAAG	.	.	.	END=7172635;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:23,16,0,2:3,23:2,2:246.775:366.612,131.36:0.0,0.0:0.0,4.23121e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:30,9,0,2:3,30:2,2:218.999:326.675,113.385:0.0,0.0:0.0,3.21717e-09,1.0
+chr1	7173577	.	ACACACACACAC	.	.	.	END=7173588;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:6,6:6-6,6-6:28,16,0,0:6,28:NULL:253.69:366.612,131.36:0.0,0.0:0.0,2.40619e-08,1.0	0/0:49:1.0:6,6:6-6,6-6:35,13,0,0:6,35:NULL:256.223:326.675,113.385:0.0990099,0.0990099:0.0,3.04857e-10,1.0
+chr1	7179754	.	AATAATAATAATAAT	.	.	.	END=7179768;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999533:5,5:5-5,5-5:14,12,0,3:5,14:3,1|4,2:185.772:366.612,131.36:0.0,0.0:1.8076e-36,0.000174118,0.999827	0/0:26:0.998277:5,5:4-5,4-5:12,11,0,2:5,12:4,2:166.309:326.675,113.385:0.36513,0.36513:2.64615e-31,0.00105222,0.998952
+chr1	7183424	.	AAGAAAGAAAGAAAGA	.	.	.	END=7183439;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999955:4,4:3-4,3-4:16,14,0,4:4,16:2,1|3,3:226.025:366.612,131.36:0.284901,0.284901:0.0,2.46733e-05,0.999978	0/0:48:1.0:4,4:4-4,4-4:35,9,0,3:4,35:2,1|3,2:247.573:326.675,113.385:0.0,0.0:0.0,9.05384e-11,1.0
+chr1	7187849	.	TGTGTGTGTGTGTG	.	.	.	END=7187862;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:7,7:7-8,7-8:20,17,0,0:7,20:NULL:239.511:366.612,131.36:0.284901,0.284901:1.26e-43,8.33049e-06,0.999994	0/0:23:0.999325:7,7:7-7,7-7:14,9,0,0:7,14:NULL:139.81:326.675,113.385:0.0,0.0:6.28781e-31,0.000398072,0.999605
+chr1	7189612	.	AATCAATCAATC	.	.	.	END=7189623;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:32,14,0,2:3,32:2,2:267.131:366.612,131.36:0.0,0.0:0.0,1.29813e-09,1.0	0/0:26:0.999995:3,3:3-4,3-4:19,6,0,0:3,19:NULL:132.971:326.675,113.385:0.382696,0.382696:0.0,1.15177e-05,0.999987
+chr1	7196731	.	GGGTGGGTGGGT	.	.	.	END=7196742;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.259324:3,3:3-6,3-6:2,10,0,0:3,2:NULL:94.8097:366.612,131.36:1.03142,1.03142:3.4255e-06,0.28281,0.717196	0/0:23:0.265731:3,3:2-6,2-6:2,21,0,0:3,2:NULL:186.44:326.675,113.385:0.686818,0.686818:5.23069e-06,0.314433,0.685577
+chr1	7200628	.	TATTTATTTATT	.	.	.	END=7200639;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:2-3,2-3:20,23,0,0:3,20:NULL:284.103:366.612,131.36:0.284901,0.284901:0.0,5.16915e-06,0.999995	0/0:11:0.93621:3,3:3-3,3-3:7,4,0,0:3,7:NULL:63.2243:326.675,113.385:0.0,0.0:1.08546e-20,0.0320985,0.967963
+chr1	7202878	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7202915;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:0.972029:19,19:18-19,18-19:20,22,0,10:18,5|19,15:5,1|6,1|9,1|10,1|12,1|13,2|16,1|17,1|18,1:384.392:366.612,131.36:0.438559,0.438559:6.84937e-17,0.027957,0.972098	0/0:47:0.474592:19,19:19-20,19-20:11,19,0,16:19,9|20,2:4,1|6,1|8,2|9,1|11,4|13,2|16,1|17,2|18,2:353.673:326.675,113.385:0.478127,0.478127:1.97729e-13,0.00220667,0.997799
+chr1	7211598	.	TTAATTAATTAA	.	.	.	END=7211609;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:217.659:366.612,131.36:0.0,0.0:0.0,3.9667e-06,0.999995	0/0:22:0.999911:3,3:3-3,3-3:16,6,0,0:3,16:NULL:121.627:326.675,113.385:0.0,0.0:0.0,5.47336e-05,0.999948
+chr1	7211666	.	TTTATTTATTTA	.	.	.	END=7211677;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:21,17,0,4:3,21:2,4:261.473:366.612,131.36:0.0,0.0:0.0,1.59179e-06,1.0	0/0:40:1.0:3,3:3-3,3-3:22,18,0,0:3,22:NULL:247.566:326.675,113.385:0.0,0.0:0.0,1.2383e-06,1.0
+chr1	7211691	.	ATTGATTGATTG	.	.	.	END=7211702;RU=attg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:41,9,0,3:3,41:2,3:263.741:366.612,131.36:0.0,0.0:0.0,2.13209e-12,1.0	0/0:47:1.0:3,3:3-3,3-3:29,16,0,2:3,29:2,2:269.281:326.675,113.385:0.0,0.0:0.0,6.33694e-09,1.0
+chr1	7217580	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=7217607;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.75922:15,15:13-15,13-15:11,21,0,2:14,3|15,8:7,1|13,1:255.373:366.612,131.36:0.573745,0.573745:2.97386e-18,0.00496799,0.995046	0/0:29:0.860925:14,14:10-15,10-15:7,15,0,4:14,7:6,1|9,1|10,1|12,1:198.8:326.675,113.385:2.02736,2.02736:1.63669e-09,0.0777891,0.922306
+chr1	7219811	.	ACACACACACACACACACACACACACAC	.	.	.	END=7219838;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.561237:14,14:11-15,11-15:12,13,0,3:13,3|14,9:7,1|8,1|11,1:197.929:366.612,131.36:1.20776,1.20776:9.43812e-11,0.436715,0.563388	0/0:38:0.999919:14,14:14-14,14-14:18,8,0,9:14,18:6,1|7,3|8,2|9,2|14,1:222.087:326.675,113.385:0.0990099,0.0990099:1.05852e-33,3.29776e-05,0.99997
+chr1	7226245	.	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	.	.	END=7226304;RU=ggcagg;PERIOD=6;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.558807:9,9:5-9,5-9:5,25,0,7:9,5:3,3|4,1|6,1|8,2:308.032:366.612,131.36:1.05035,1.05035:0.971675,0.0283795,9.27092e-13	0/0:39:0.550706:10,10:3-10,3-10:3,20,0,13:10,3:2,1|3,1|4,2|6,1|7,1|8,3|9,4:288.409:326.675,113.385:1.81796,1.81796:2.69798e-05,0.369363,0.630662
+chr1	7227370	.	AAATAAAATAAAATAAAATAAAATA	.	.	.	END=7227394;RU=aaata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.994263:5,5:5-5,5-5:11,17,0,7:5,11:2,2|3,4|4,1:255.27:366.612,131.36:0.0,0.0:8.55266e-37,0.00397439,0.996036	0/0:37:1.0:5,5:5-5,5-5:23,10,0,4:5,23:3,2|4,2:209.855:326.675,113.385:0.0,0.0:0.0,4.30756e-07,1.0
+chr1	7240279	.	ATTTATTTATTT	.	.	.	END=7240290;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:175.037:366.612,131.36:0.0,0.0:0.0,1.48899e-06,1.0	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:153.32:326.675,113.385:0.0,0.0:0.0,1.07333e-05,0.999993
+chr1	7240750	.	ATGCATGCATGC	.	.	.	END=7240761;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999371:3,3:3-3,3-3:14,14,0,0:3,14:NULL:180.484:366.612,131.36:0.0,0.0:9.596e-42,0.00036374,0.999637	0/0:21:0.997102:3,3:3-3,3-3:12,9,0,0:3,12:NULL:128.833:326.675,113.385:0.0,0.0:1.46053e-35,0.00175663,0.998247
+chr1	7241788	.	TCTCTCTCTCTCTC	.	.	.	END=7241801;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.995579:7,7:7-7,7-7:11,12,0,4:7,11:5,1|6,3:188.603:366.612,131.36:0.0,0.0:5.84163e-25,0.00174596,0.998261	0/0:21:0.99991:7,7:7-7,7-7:17,4,0,0:7,17:NULL:106.626:326.675,113.385:0.0,0.0:1.80641e-38,5.65364e-05,0.999947
+chr1	7245079	.	ATAATAATAATA	.	.	.	END=7245090;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998856:4,4:4-4,4-4:13,13,0,0:4,13:NULL:167.994:366.612,131.36:0.0,0.0:8.78662e-34,0.000611726,0.999392	0/0:21:0.946898:4,4:4-4,4-4:8,13,0,0:4,8:NULL:150.095:326.675,113.385:0.0,0.0:7.85469e-21,0.0389249,0.961143
+chr1	7247751	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7247798;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:51:0.868045:24,25:22-24,22-25:14,20,0,16:22,3|23,3|24,8:6,2|7,1|8,1|9,2|11,1|12,1|13,1|16,1|17,1|18,3|20,1|25,1:402.153:366.612,131.36:0.803751,1.19724:2.11915e-11,0.00923074,0.990791	0/2:31:0.312892:24,29:12-24,12-29:5,11,0,13:24,5:6,2|7,1|8,1|9,1|10,1|12,1|13,2|15,1|19,1|21,1|29,1:231.449:326.675,113.385:4.3687,7.89588:8.50332e-13,1.16424e-06,1.0
+chr1	7253471	.	TAAATAAATAAA	.	.	.	END=7253482;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999982:3,3:3-3,3-3:18,10,0,0:3,18:NULL:163.726:366.612,131.36:0.0,0.0:0.0,2.50208e-05,0.999978	0/0:17:0.995584:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.4252:326.675,113.385:0.0,0.0:3.59897e-33,0.00242419,0.997585
+chr1	7253491	.	ATATATATATATAT	.	.	.	END=7253504;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.998169:7,7:7-7,7-7:13,11,0,0:7,13:NULL:153.192:366.612,131.36:0.0,0.0:3.80595e-25,0.00114606,0.99886	0/0:19:0.999227:7,7:7-7,7-7:14,5,0,0:7,14:NULL:101.671:326.675,113.385:0.0,0.0:1.73846e-27,0.000431609,0.999569
+chr1	7254256	.	CCCACCCACCCA	.	.	.	END=7254267;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:28,17,0,0:3,28:NULL:260.773:366.612,131.36:0.0,0.0:0.0,1.17482e-08,1.0	0/0:22:0.999886:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.393:326.675,113.385:0.0,0.0:0.0,7.30345e-05,0.999926
+chr1	7256849	.	ATTTATTTATTT	.	.	.	END=7256860;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:21,16,0,0:3,21:NULL:233.195:366.612,131.36:0.0,0.0:0.0,4.97224e-06,0.999995	0/0:43:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:241.71:326.675,113.385:0.0,0.0:0.0,1.21702e-08,1.0
+chr1	7260017	.	TATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTAT	.	.	END=7260043;RU=tat;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:0.998782:10,10:7-10,7-10:14,29,0,7:10,14:3,2|5,2|7,1|8,1|9,1:388.096:366.612,131.36:1.06766,1.06766:3.65611e-39,0.000746253,0.999256	0/0:35:0.999432:9,9:9-10,9-10:15,13,0,5:9,15:4,2|6,1|8,2:225.477:326.675,113.385:0.322657,0.322657:6.9475e-26,0.000247089,0.999757
+chr1	7267550	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7267573;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:72:0.991578:12,12:11-12,11-12:33,30,0,8:11,6|12,25|13,2:5,1|6,1|7,1|8,1|11,4:493.028:366.612,131.36:0.452422,0.452422:6.60644e-32,0.00844298,0.991577	0/0:42:0.999214:12,12:11-12,11-12:24,10,0,8:11,3|12,21:7,1|8,1|9,2|10,2|11,2:263.425:326.675,113.385:0.169767,0.169767:3.8886e-28,0.000792244,0.999211
+chr1	7269602	.	TGTTTGTTTGTT	.	.	.	END=7269613;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:3,3:3-3,3-3:36,27,0,0:3,36:NULL:388.619:366.612,131.36:0.0,0.0:0.0,4.76789e-11,1.0	0/0:53:1.0:3,3:3-3,3-3:30,23,0,0:3,30:NULL:328.499:326.675,113.385:0.0,0.0:0.0,1.00681e-08,1.0
+chr1	7269942	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7269983;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:71:0.289082:21,21:21-31,21-31:23,27,0,21:20,2|21,18|22,3:5,1|6,4|7,2|9,1|10,1|11,3|12,1|14,4|15,1|20,1|21,1|29,1:540.445:366.612,131.36:4.00162,4.00162:2.35062e-28,2.28465e-05,0.999979	0/0:58:0.957569:21,21:21-22,21-22:21,21,0,14:19,2|21,16|22,3:4,1|5,2|6,2|7,1|11,2|13,1|14,1|15,2|17,1|18,1:410.119:326.675,113.385:0.480581,0.480581:1.11615e-18,0.00176366,0.99824
+chr1	7281471	.	AGCAGCAGCAGC	.	.	.	END=7281482;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,17,0,0:4,26:NULL:253.314:366.612,131.36:0.0,0.0:0.0,1.49434e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:27,12,0,2:4,27:3,2:231.62:326.675,113.385:0.0,0.0:0.0,4.11805e-08,1.0
+chr1	7281705	.	ACCCACCCACCC	.	.	.	END=7281716;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.921271:3,3:1-3,1-3:8,14,0,0:3,8:NULL:161.358:366.612,131.36:0.339533,0.339533:5.11599e-23,0.0587992,0.941284	0/0:24:0.994423:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.602:326.675,113.385:0.0,0.0:1.21422e-32,0.00349456,0.996513
+chr1	7287856	.	CTGCTGCTGCTG	.	.	.	END=7287867;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.00001:4,4:4-4,4-4:22,31,0,2:4,22:3,2:387.235:366.612,131.36:0.0,0.0:0.0,1.92848e-06,1.0	0/0:49:1.0:4,4:4-4,4-4:28,19,0,2:4,28:3,2:295.475:326.675,113.385:0.0,0.0:0.0,1.55583e-08,1.0
+chr1	7289516	.	AACAACAACAACAACAACAACAAC	.	.	.	END=7289539;RU=aac;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999984:8,8:7-8,7-8:18,22,0,8:8,18:4,1|5,2|7,4|8,1:337.307:366.612,131.36:0.195027,0.195027:0.0,7.08475e-06,0.999994	0/0:64:1.0:8,8:8-8,8-8:32,21,0,10:8,32:4,3|5,2|6,1|7,4:395.626:326.675,113.385:0.0,0.0:0.0,7.39514e-10,1.0
+chr1	7295421	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=7295444;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997089:6,6:6-6,6-6:12,14,0,2:6,12:3,2:198.845:366.612,131.36:0.0,0.0:1.10866e-29,0.00180377,0.998201	0/0:20:0.985667:6,6:6-6,6-6:10,8,0,2:6,10:2,1|3,1:133.664:326.675,113.385:0.0,0.0:8.02214e-25,0.0101885,0.989835
+chr1	7300043	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7300082;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.791622:21,22:21-22,21-22:5,21,0,11:21,2|22,3:5,1|8,2|9,2|16,1|17,1|19,1|20,2|21,1:300.216:366.612,131.36:0.489073,0.253975:2.05885e-32,0.0041394,0.99587	0/3:31:0.271667:20,31:20-21,20-33:5,14,0,11:20,5:7,1|8,2|10,2|11,1|13,1|15,1|16,1|18,1|30,1:249.731:326.675,113.385:0.311527,5.17131:1.2747e-12,9.41717e-07,1.0
+chr1	7308819	.	CTTCCTTCCTTC	.	.	.	END=7308830;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:19,17,0,0:3,19:NULL:235.2:366.612,131.36:0.0,0.0:0.0,8.92855e-06,0.999994	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:176.634:326.675,113.385:0.0,0.0:0.0,5.62191e-06,0.999995
+chr1	7311860	.	AATAAATAAATA	.	.	.	END=7311871;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:243.629:366.612,131.36:0.0,0.0:0.0,1.32772e-06,1.0	0/0:35:1.00001:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.639:326.675,113.385:0.0,0.0:0.0,3.8687e-06,1.0
+chr1	7312335	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7312382;RU=ga;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:40:0.627028:26,27:26-27,26-27:6,19,0,15:26,3|27,3:5,1|6,1|10,1|11,1|12,1|14,1|17,2|18,2|20,1|21,2|24,1|26,1:327.935:366.612,131.36:0.499387,0.270063:1.13217e-27,0.00412896,0.995884	0/0:24:0.366625:24,24:21-25,21-25:4,11,0,7:24,4:4,1|9,1|13,1|19,2|20,2:184.691:326.675,113.385:1.32681,1.32681:3.50187e-05,0.22487,0.775126
+chr1	7317649	.	TATATATATATATATATATATATATATATATATA	TATATATATA	.	.	END=7317682;RU=ta;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00159136:5,5:1-5,1-5:0,4,0,0:NULL:NULL:38.0264:366.612,131.36:1.9367,1.9367:0.214444,0.566663,0.218941	0/0:5:0.214537:17,17:12-17,12-17:3,1,0,0:17,3:NULL:23.9926:326.675,113.385:2.46433,2.46433:0.000415716,0.495034,0.504577
+chr1	7319965	.	TGTTTTGTTTTGTTT	.	.	.	END=7319979;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:32,20,0,3:3,32:2,3:325.88:366.612,131.36:0.0990099,0.0990099:0.0,9.31041e-10,1.0	0/0:38:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.419:326.675,113.385:0.0,0.0:0.0,1.10491e-08,1.0
+chr1	7320026	.	CAACAACAACAA	.	.	.	END=7320037;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:23,25,0,0:4,23:NULL:313.598:366.612,131.36:0.0,0.0:0.0,1.41139e-06,1.0	0/0:45:1.0:4,4:4-4,4-4:35,8,0,2:4,35:3,2:219.811:326.675,113.385:0.0,0.0:0.0,1.13476e-10,1.0
+chr1	7320521	.	TACATACATACA	.	.	.	END=7320532;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999718:3,3:3-3,3-3:15,13,0,4:3,15:2,4:208.139:366.612,131.36:0.0,0.0:0.0,8.72314e-05,0.999917	0/0:24:0.999363:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.282:326.675,113.385:0.0,0.0:0.0,0.000375133,0.999628
+chr1	7321482	.	ACACACACACACAC	.	.	.	END=7321495;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:23,18,0,6:7,23:5,2|6,3|7,1:303.377:366.612,131.36:0.0,0.0:0.0,1.80126e-07,1.0	0/0:36:0.999919:7,7:6-7,6-7:17,16,0,2:7,17:5,1|6,1:226.164:326.675,113.385:0.169767,0.169767:3.24696e-33,4.78734e-05,0.999955
+chr1	7322714	.	CCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTC	.	.	.	END=7322755;RU=cccttc;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.996653:7,7:7-7,7-7:11,11,0,3:7,11:5,1|6,1|7,1:170.747:366.612,131.36:0.0,0.0:3.41976e-34,0.00110666,0.998898	0/0:13:0.961654:7,7:7-11,7-11:9,0,0,3:7,9:3,1|4,2:58.7664:326.675,113.385:1.93776,1.93776:1.54565e-21,0.0115338,0.988493
+chr1	7322758	.	CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	CCCTCCCTCCCTCCCTCCCTCCCTCCCT,CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	.	.	END=7322825;RU=ccct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:20:0.0513381:12,12:7-13,7-13:0,12,0,8:NULL:4,1|5,2|7,1|9,2|10,1|12,1:166.878:366.612,131.36:1.53046,1.53046:1.0,0.0,0.0	1/1:3:0.034616:7,7:4-7,4-7:0,0,0,3:NULL:4,1|5,1|7,1:21.8234:326.675,113.385:1.0297,1.0297:1.0,0.0,0.0
+chr1	7322843	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7322906;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.722905:17,17:17-17,17-17:5,11,0,5:17,5:3,1|8,1|10,1|13,1|15,1:163.352:366.612,131.36:0.0,0.0:5.502e-11,0.0988771,0.901225	0/0:6:0.392285:16,16:16-16,16-16:3,0,0,3:16,3:3,1|5,1|9,1:35.5546:326.675,113.385:0.0,0.0:3.24348e-05,0.308657,0.691323
+chr1	7328752	.	ACCCACCCACCC	.	.	.	END=7328763;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.613872:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6549:366.612,131.36:0.0,0.0:3.22758e-10,0.15496,0.845119	0/0:11:0.757354:3,3:3-3,3-3:5,6,0,0:3,5:NULL:74.6943:326.675,113.385:0.19802,0.19802:2.47669e-12,0.128837,0.871257
+chr1	7336314	.	TTTGTTTGTTTGTTTG	.	.	.	END=7336329;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999524:4,4:4-4,4-4:14,13,0,4:4,14:3,4:202.302:366.612,131.36:0.0,0.0:0.0,0.000197975,0.999804	0/0:42:1.0:4,4:4-4,4-4:23,15,0,4:4,23:3,4:255.565:326.675,113.385:0.0,0.0:0.0,3.73456e-07,1.0
+chr1	7336498	.	TTGCTTGCTTGC	.	.	.	END=7336509;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99571:3,3:3-3,3-3:11,15,0,0:3,11:NULL:182.109:366.612,131.36:0.0,0.0:1.17594e-37,0.00278756,0.997222	0/0:46:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:287.118:326.675,113.385:0.0,0.0:0.0,8.91218e-08,1.0
+chr1	7338572	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7338615;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.421656:26,26:25-27,25-27:5,18,0,10:25,2|26,3:5,2|8,2|11,1|15,1|20,1|21,1|25,1|26,1:269.903:366.612,131.36:0.77215,0.77215:0.0,0.0,1.0	0/0:26:0.775999:22,22:15-23,15-23:9,13,0,2:21,2|22,7:8,1|18,1:187.222:326.675,113.385:3.54718,3.54718:4.10557e-09,0.194642,0.805411
+chr1	7338650	.	GAGAGAGAGAGA	.	.	.	END=7338661;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:199.444:366.612,131.36:0.0,0.0:0.0,7.39755e-06,0.999994	0/0:31:0.677083:6,6:5-6,5-6:16,15,0,0:5,2|6,14:NULL:213.658:326.675,113.385:0.481803,0.481803:3.46657e-31,0.322893,0.677118
+chr1	7339588	.	GGAGGGAGGGAG	.	.	.	END=7339599;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:20,15,0,6:3,20:2,6:258.753:366.612,131.36:0.0,0.0:0.0,1.87913e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.179:326.675,113.385:0.0,0.0:0.0,1.76217e-07,1.0
+chr1	7342098	.	CTTCCTTCCTTC	.	.	.	END=7342109;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:239.784:366.612,131.36:0.0,0.0:0.0,1.00833e-05,0.999993	0/0:27:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:140.672:326.675,113.385:0.0,0.0:0.0,3.06032e-06,1.0
+chr1	7346787	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7346820;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.835079:15,15:15-16,15-16:15,9,0,4:14,2|15,11|16,2:8,1|11,1|13,1|14,1:187.666:366.612,131.36:0.478127,0.478127:0.998868,0.00113628,2.39974e-18	0/2:40:0.820877:17,18:17-17,17-18:14,14,0,11:17,11|18,3:6,1|8,1|9,1|10,1|12,4|16,3:286.675:326.675,113.385:0.0,0.51751:2.57552e-17,0.000174086,0.999827
+chr1	7348276	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	.	END=7348327;RU=ctcc;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.301025:13,13:10-13,10-13:2,18,0,11:13,2:2,1|3,2|5,2|6,2|7,1|11,2|12,1:255.873:366.612,131.36:0.744223,0.744223:4.55782e-05,0.480577,0.519467	0/0:21:0.299182:13,13:6-13,6-13:3,7,0,10:13,3:2,2|4,2|5,1|6,1|7,1|9,3:147.626:326.675,113.385:3.34451,3.34451:3.97709e-07,0.52238,0.477716
+chr1	7358397	.	GAACGAACGAAC	.	.	.	END=7358408;RU=gaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:19,21,0,2:3,19:2,2:283.523:366.612,131.36:0.0,0.0:0.0,7.11925e-06,0.999994	0/0:36:0.999979:3,3:2-3,2-3:18,17,0,0:3,18:NULL:228.634:326.675,113.385:0.382696,0.382696:0.0,2.71399e-05,0.999972
+chr1	7358417	.	GGAGGGAGGGAG	.	.	.	END=7358428;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999972:3,3:3-3,3-3:18,22,0,0:3,18:NULL:271.15:366.612,131.36:0.0,0.0:0.0,2.61653e-05,0.999978	0/0:36:0.999992:3,3:3-3,3-3:18,15,0,3:3,18:2,3:231.967:326.675,113.385:0.0,0.0:0.0,1.52545e-05,0.999986
+chr1	7358698	.	GTGTGTGTGTGTGT	.	.	.	END=7358711;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999251:7,7:6-7,6-7:14,24,0,2:7,14:5,1|6,1:292.536:366.612,131.36:0.253975,0.253975:2.38892e-31,0.000399694,0.999605	0/0:42:1.0:7,7:7-7,7-7:20,19,0,3:7,20:5,3:276.71:326.675,113.385:0.0,0.0:3.9e-44,6.48288e-06,0.999995
+chr1	7360103	.	GCTGGCTGGCTG	.	.	.	END=7360114;RU=gctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:145.701:366.612,131.36:0.0,0.0:0.0,1.49409e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:20,19,0,2:3,20:2,2:266.982:326.675,113.385:0.0,0.0:0.0,8.91998e-06,0.999994
+chr1	7364232	.	AACAACAACAACAACAACAACAACAAC	.	.	.	END=7364258;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.99988:9,9:9-9,9-9:16,18,0,8:9,16:4,2|5,3|6,1|7,1|8,1:294.402:366.612,131.36:0.0,0.0:1e-45,8.34886e-05,0.999918	0/0:37:0.998618:9,9:4-9,4-9:23,4,0,9:8,2|9,21:4,2|5,3|7,1|8,3:207.845:326.675,113.385:1.27865,1.27865:0.0,0.00139733,0.998609
+chr1	7369828	.	TTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGT	.	.	.	END=7369877;RU=ttggt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.988251:10,10:10-10,10-10:9,17,0,11:10,9:3,1|4,2|5,1|6,3|7,1|8,1|9,2:267.282:366.612,131.36:0.0990099,0.0990099:4.56816e-24,0.00662809,0.993385	0/0:42:0.983934:10,10:10-10,10-10:10,17,0,15:10,10:2,1|3,2|4,1|5,4|6,3|8,4:309.264:326.675,113.385:0.0,0.0:4.08607e-26,0.0115998,0.988427
+chr1	7370253	.	TCTATCTATCTATCTATCTATCTATCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7370288;RU=tcta;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999473:9,9:8-9,8-9:15,19,0,5:9,15:2,1|3,1|5,1|7,1|8,1:273.082:366.612,131.36:0.236383,0.236383:8.91454e-31,0.000343567,0.999659	1/1:32:0.987571:10,10:9-10,9-10:10,15,0,6:10,10:3,2|6,1|9,3:229.725:326.675,113.385:0.382696,0.382696:0.0,0.00361669,0.996391
+chr1	7372684	.	GTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7372697;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.992972:7,7:7-7,7-7:11,7,0,0:7,11:NULL:109.451:366.612,131.36:0.0,0.0:1.69996e-23,0.00378935,0.996218	0/1:26:0.275371:7,17:7-7,6-17:20,4,0,2:6,2|7,18:5,1|17,1:155.27:326.675,113.385:0.0,4.95623:4.12548e-36,0.000283499,0.99972
+chr1	7373113	.	AATAATAATAAT	.	.	.	END=7373124;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99978:4,4:4-4,4-4:15,9,0,2:4,15:3,2:162.12:366.612,131.36:0.0,0.0:7.85066e-39,9.29249e-05,0.99991	0/0:20:0.999906:4,4:4-4,4-4:17,3,0,0:4,17:NULL:97.0953:326.675,113.385:0.0,0.0:1.44e-43,6.04494e-05,0.999941
+chr1	7374196	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7374220;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:21,10,0,6:5,21:2,1|4,5:216.13:366.612,131.36:0.0,0.0:0.0,7.71321e-07,1.0	0/0:40:1.0:5,5:5-5,5-5:29,5,0,6:5,29:4,6:207.505:326.675,113.385:0.0,0.0:0.0,5.08972e-09,1.0
+chr1	7375130	.	AAGAAGAAGAAG	.	.	.	END=7375141;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:23,17,0,0:4,23:NULL:243.004:366.612,131.36:0.0,0.0:0.0,1.47844e-06,1.0	0/0:27:0.999994:4,4:3-4,3-4:19,7,0,0:4,19:NULL:139.553:326.675,113.385:0.236383,0.236383:0.0,1.34472e-05,0.999987
+chr1	7377589	.	GTGTGTGTGTGT	.	.	.	END=7377600;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.00001:6,6:6-6,6-6:22,23,0,0:6,22:NULL:305.402:366.612,131.36:0.0,0.0:0.0,2.00292e-06,1.0	0/0:33:0.999991:6,6:6-6,6-6:18,13,0,2:6,18:5,2:200.378:326.675,113.385:0.0,0.0:1e-45,1.50686e-05,0.999986
+chr1	7378672	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7378691;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:5,5:5-5,5-5:22,17,0,2:5,22:3,1|4,1:259.382:366.612,131.36:0.0,0.0:0.0,1.4993e-06,1.0	0/0:27:0.999944:5,5:5-5,5-5:17,7,0,3:5,17:3,1|4,2:158.67:326.675,113.385:0.0,0.0:0.0,2.59651e-05,0.999978
+chr1	7379008	.	GTGTGTGTGTGT	GTGTGTGTGT	.	.	END=7379019;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:1.0:5,6:5-5,6-6:21,15,0,0:4,2|5,11|6,8:NULL:244.131:366.612,131.36:0.0990099,0.220506:2.68448e-10,1.0,1.29073e-16	0/0:37:0.997376:6,6:2-6,2-6:22,11,0,2:5,2|6,20:4,1|5,1:210.677:326.675,113.385:1.55789,1.55789:2.05557e-35,0.00263789,0.997368
+chr1	7379032	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACA	.	.	END=7379059;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999806:13,13:13-13,13-13:25,16,0,5:12,3|13,22:8,3|10,1|11,1:304.336:366.612,131.36:0.0,0.0:1.0,1.76595e-06,4.13362e-22	0/0:39:0.999089:14,14:10-14,10-14:22,10,0,6:13,3|14,19:6,1|7,1|8,1|10,2|11,1:238.742:326.675,113.385:1.24776,1.24776:1.8e-21,0.000919131,0.999082
+chr1	7382087	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7382106;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.996054:4,4:4-4,4-4:10,24,0,3:4,10:3,3:276.813:366.612,131.36:0.0,0.0:1.88766e-33,0.00203106,0.997974	0/0:19:0.993888:4,4:4-4,4-4:11,8,0,0:4,11:NULL:112.713:326.675,113.385:0.0,0.0:4.26474e-36,0.00449055,0.995522
+chr1	7384157	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=7384198;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:66:0.746841:22,23:22-22,21-23:13,30,0,22:21,2|22,8|23,3:5,1|6,1|7,1|9,1|10,2|11,1|14,2|15,2|16,4|18,2|20,2|21,1|22,2:518.97:366.612,131.36:0.139319,0.664031:3.11801e-38,7.10975e-05,0.999932	0/1:53:0.746418:21,22:21-21,21-22:16,17,0,18:21,12|22,4:5,1|6,2|9,1|10,1|11,1|12,2|13,3|14,1|16,2|18,2|20,2:378.127:326.675,113.385:0.0,0.538126:1.12812e-15,9.63829e-05,0.999903
+chr1	7385475	.	CAACAACAACAA	.	.	.	END=7385486;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:29,17,0,3:4,29:4,3:300.122:366.612,131.36:0.0,0.0:0.0,1.86986e-09,1.0	0/0:31:0.99995:4,4:4-5,4-5:17,8,0,5:4,17:3,3|4,2:177.236:326.675,113.385:0.412766,0.412766:0.0,6.88485e-06,0.999994
+chr1	7385514	.	AAAACAAAACAAAAC	.	.	.	END=7385528;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:27,17,0,0:3,27:NULL:267.996:366.612,131.36:0.0,0.0:0.0,6.51147e-08,1.0	0/0:28:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:141.849:326.675,113.385:0.0,0.0:0.0,1.66293e-06,1.0
+chr1	7385949	.	ACAAAACAAAACAAAACAAA	.	.	.	END=7385968;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.998894:4,4:4-4,4-4:15,16,0,0:4,15:NULL:215.301:366.612,131.36:0.0,0.0:0.0,0.000847047,0.999157	0/0:29:1.0:4,4:4-4,4-4:21,8,0,0:4,21:NULL:161.162:326.675,113.385:0.0,0.0:0.0,5.3986e-06,0.999995
+chr1	7386148	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7386177;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.45196:15,27:15-15,15-27:19,14,0,10:14,3|15,16:4,2|8,2|9,1|10,2|11,1|14,1|27,1:319.729:366.612,131.36:0.0,5.81499:1.70628e-20,6.75452e-05,0.999933	0/0:31:0.990378:15,15:15-15,15-15:11,9,0,10:15,11:4,2|8,1|9,1|10,1|12,1|13,3|14,1:210.515:326.675,113.385:0.139319,0.139319:1.95257e-14,0.00320105,0.996807
+chr1	7389238	.	AAAACAAAACAAAAC	.	.	.	END=7389252;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999582:3,3:3-3,3-3:14,21,0,3:3,14:2,3:266.595:366.612,131.36:0.0,0.0:0.0,0.000228812,0.999773	0/0:20:0.996706:3,3:3-3,3-3:11,6,0,3:3,11:2,3:117.808:326.675,113.385:0.0,0.0:3.58095e-38,0.00114915,0.998854
+chr1	7389561	.	AACAACAACAAC	.	.	.	END=7389572;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.986302:4,4:4-4,4-4:10,16,0,0:4,10:NULL:184.473:366.612,131.36:0.0,0.0:3.2027e-33,0.00898798,0.991031	0/0:8:0.572521:4,4:4-4,4-4:4,4,0,0:4,4:NULL:50.0009:326.675,113.385:0.29703,0.29703:1.07314e-13,0.254933,0.745076
+chr1	7390007	.	ACACACACACAC	.	.	.	END=7390018;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:28,8,0,4:6,28:4,2|5,2:213.884:366.612,131.36:0.0,0.0:0.0,1.5855e-08,1.0	0/0:12:0.956369:6,6:6-6,6-6:8,4,0,0:6,8:NULL:64.5737:326.675,113.385:0.0,0.0:3.70441e-17,0.0228166,0.97723
+chr1	7390525	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7390544;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:23,13,0,2:4,23:3,2:218.835:366.612,131.36:0.0,0.0:0.0,4.33981e-07,1.0	0/0:19:0.998138:4,4:4-4,4-4:12,5,0,2:4,12:3,2:102.812:326.675,113.385:0.0,0.0:4.38078e-36,0.000734944,0.99927
+chr1	7391902	.	AAACAAACAAAC	.	.	.	END=7391913;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.95787:3,3:3-3,3-3:8,9,0,0:3,8:NULL:117.574:366.612,131.36:0.0,0.0:1.6678e-25,0.0217778,0.978265	0/0:9:0.454772:3,3:1-3,1-3:3,6,0,0:3,3:NULL:64.9642:326.675,113.385:0.390054,0.390054:2.83571e-10,0.286577,0.713424
+chr1	7392178	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=7392205;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.989337:13,13:13-15,13-15:18,15,0,5:13,16|14,2:7,1|8,1|9,1|11,1|12,1:258.558:366.612,131.36:0.655861,0.655861:0.989359,0.0106623,1.70261e-14	0/0:32:0.745438:14,14:13-14,13-14:14,12,0,6:13,3|14,11:5,1|6,1|9,1|10,2|11,1:220.514:326.675,113.385:0.469019,0.469019:1.61047e-11,0.254054,0.745954
+chr1	7392363	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7392394;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.990618:8,8:8-8,8-8:12,12,0,2:8,12:3,1|6,1:179.708:366.612,131.36:0.0,0.0:9.96931e-33,0.00644949,0.993565	0/1:30:0.293661:8,12:8-8,8-12:18,6,0,6:8,18:4,1|7,3|8,1|11,1:185.442:326.675,113.385:0.0,1.79249:0.0,1.26003e-08,1.0
+chr1	7393303	.	TAAATAAATAAATAAA	.	.	.	END=7393318;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.945166:4,4:4-4,4-4:9,14,0,0:4,9:NULL:164.952:366.612,131.36:0.0,0.0:8.62914e-26,0.0447158,0.955357	0/0:5:0.572755:4,4:4-4,4-4:4,1,0,0:4,4:NULL:24.6243:326.675,113.385:0.0,0.0:2.61914e-12,0.227011,0.773022
+chr1	7395935	.	TATATTATATTATAT	.	.	.	END=7395949;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.987288:3,3:3-3,3-3:9,6,0,2:3,9:2,2:104.632:366.612,131.36:0.0,0.0:1.594e-26,0.00461756,0.995394	0/0:12:0.990461:3,3:3-3,3-3:10,2,0,0:3,10:NULL:56.8744:326.675,113.385:0.0,0.0:3.51705e-29,0.00420052,0.995809
+chr1	7397361	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7397400;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:38:0.731255:21,22:21-23,21-23:8,16,0,12:21,6|22,2:4,1|6,1|7,1|8,2|9,2|10,1|17,1|19,2|20,1:279.421:366.612,131.36:0.382183,0.782491:3.14671e-23,0.00209191,0.997913	0/0:29:0.904946:20,20:19-21,19-21:7,10,0,10:20,7:6,1|7,1|8,1|9,2|18,4|19,1:201.872:326.675,113.385:0.424474,0.424474:6.32146e-09,0.0305788,0.969479
+chr1	7398005	.	CCCGCCCGCCCG	.	.	.	END=7398016;RU=cccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:23,13,0,0:3,23:NULL:211.852:366.612,131.36:0.0,0.0:0.0,8.05988e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.369:326.675,113.385:0.0,0.0:0.0,3.3594e-07,1.0
+chr1	7399995	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=7400022;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.99992:7,7:7-7,7-7:17,18,0,2:7,17:4,1|6,1:252.317:366.612,131.36:0.0,0.0:8.398e-42,6.27518e-05,0.99994	0/0:29:0.999872:7,7:2-7,2-7:16,7,0,5:7,16:2,1|3,1|4,1|6,2:168.405:326.675,113.385:2.26211,2.26211:6.47696e-40,7.5926e-05,0.999926
+chr1	7400995	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7401018;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999799:6,6:5-6,5-6:15,15,0,5:6,15:3,1|4,2|5,2:236.311:366.612,131.36:0.284901,0.284901:1.1652e-41,9.16741e-05,0.99991	0/0:53:1.0:6,6:6-6,6-6:26,16,0,11:6,26:2,1|3,5|4,3|5,2:331.38:326.675,113.385:0.0,0.0:0.0,5.8558e-08,1.0
+chr1	7401260	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7401291;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.999134:15,15:15-15,15-15:25,13,0,7:14,3|15,20|16,2:4,1|7,1|9,2|11,1|12,1|13,1:297.301:366.612,131.36:0.139319,0.139319:0.99925,0.000751175,7.51773e-16	0/0:55:1.0:16,16:16-16,16-16:31,17,0,6:15,3|16,28:7,1|11,2|12,1|13,1|15,1:351.031:326.675,113.385:0.0,0.0:5.42445e-32,1.93846e-06,1.0
+chr1	7403154	.	ATTTATTTATTT	.	.	.	END=7403165;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:30,18,0,0:3,30:NULL:285.884:366.612,131.36:0.0,0.0:0.0,6.03542e-09,1.0	0/0:30:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:138.461:326.675,113.385:0.0,0.0:0.0,7.52932e-08,1.0
+chr1	7403493	.	ACACACACACACACAC	.	.	.	END=7403508;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:8,8:8-8,8-8:23,21,0,5:8,23:4,1|5,1|6,1|7,2:333.163:366.612,131.36:0.0,0.0:1.72e-43,7.76178e-07,1.0	0/0:33:0.99689:8,8:8-9,8-9:12,16,0,4:8,12:5,2|6,2:226.827:326.675,113.385:0.334882,0.334882:4.59965e-23,0.0016035,0.998404
+chr1	7403509	.	CCACCACCACCACCACCACCA	.	.	.	END=7403529;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:7,7:7-7,7-7:21,19,0,0:7,21:NULL:268.328:366.612,131.36:0.0,0.0:0.0,1.092e-05,0.999993	0/0:31:0.99736:7,7:7-7,7-7:12,15,0,4:7,12:4,2|5,2:216.079:326.675,113.385:0.0,0.0:2.04253e-36,0.00152758,0.998475
+chr1	7403538	.	AAATAAATAAAT	.	.	.	END=7403549;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:279.211:366.612,131.36:0.0,0.0:0.0,1.52631e-06,1.0	0/0:26:0.999353:3,3:3-3,3-3:14,12,0,0:3,14:NULL:167.036:326.675,113.385:0.0,0.0:1.7057e-41,0.000411744,0.999591
+chr1	7407348	.	TAATAATAATAATAATAA	.	.	.	END=7407365;RU=taa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:6,6:6-6,6-6:27,20,0,0:6,27:NULL:286.472:366.612,131.36:0.0,0.0:0.0,8.2752e-08,1.0	0/0:36:0.999988:6,6:5-6,5-6:18,12,0,5:6,18:4,2|5,3:225.568:326.675,113.385:0.195027,0.195027:1.25e-43,9.64497e-06,0.999993
+chr1	7407486	.	TATATATATATA	.	.	.	END=7407497;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999744:6,6:6-6,6-6:16,11,0,0:6,16:NULL:166.769:366.612,131.36:0.0,0.0:4.11278e-28,0.000193897,0.99981	0/0:23:0.987407:6,6:6-6,6-6:10,13,0,0:6,10:NULL:161.381:326.675,113.385:0.0,0.0:6.72984e-18,0.00804479,0.991974
+chr1	7407553	.	ACACACACACAC	.	.	.	END=7407564;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:6,6:6-6,6-6:23,9,0,2:6,23:5,2:189.028:366.612,131.36:0.0,0.0:0.0,4.76762e-07,1.0	0/0:33:1.0:6,6:6-6,6-6:25,7,0,0:6,25:NULL:165.558:326.675,113.385:0.0,0.0:0.0,1.80849e-07,1.0
+chr1	7409238	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7409277;RU=aaaac;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999948:8,8:8-8,8-8:17,13,0,13:8,17:3,1|4,4|5,1|6,2|7,5:276.522:366.612,131.36:0.0,0.0:1.2e-43,2.10434e-05,0.999979	0/0:21:0.982309:8,8:7-8,7-8:9,3,0,8:8,9:3,1|4,3|6,1|7,3:120.301:326.675,113.385:0.45695,0.45695:1.97341e-23,0.00575558,0.994257
+chr1	7410953	.	AGAAGAAGAAGA	.	.	.	END=7410964;RU=aga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997912:4,4:4-4,4-4:13,15,0,0:4,13:NULL:186.244:366.612,131.36:0.0,0.0:5.88746e-31,0.00152302,0.998481	0/0:29:0.998108:4,4:4-4,4-4:13,16,0,0:4,13:NULL:196.156:326.675,113.385:0.0,0.0:4.49557e-31,0.00144172,0.998564
+chr1	7416243	.	ATTTATTTATTT	.	.	.	END=7416254;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:216.436:366.612,131.36:0.0,0.0:0.0,1.14461e-06,1.0	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.715:326.675,113.385:0.0,0.0:0.0,4.6248e-07,1.0
+chr1	7421873	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7421914;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.998197:21,21:21-23,21-23:14,18,0,11:21,14:6,1|7,3|12,2|15,1|19,2|20,2:324.695:366.612,131.36:0.670934,0.670934:5.09017e-16,0.000522917,0.999478	0/0:38:0.686723:21,21:20-22,20-22:5,16,0,15:21,5:4,1|8,1|9,1|10,2|11,1|14,2|15,1|16,1|17,1|18,1|19,1|20,2:290.947:326.675,113.385:0.626507,0.626507:4.14178e-06,0.120716,0.879379
+chr1	7423553	.	TGGGTTGGGTTGGGT	.	.	.	END=7423567;RU=tgggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:28,13,0,2:3,28:2,1|3,1:245.609:366.612,131.36:0.0,0.0:0.0,6.4823e-09,1.0	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.697:326.675,113.385:0.0,0.0:0.0,2.56633e-06,1.0
+chr1	7423835	.	CCAGCCAGCCAG	.	.	.	END=7423846;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998069:3,3:3-3,3-3:12,18,0,0:3,12:NULL:213.338:366.612,131.36:0.0,0.0:2.9623e-41,0.00101561,0.99899	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.014:326.675,113.385:0.0,0.0:0.0,8.03606e-06,0.999994
+chr1	7424052	.	ATATATATATATAT	.	.	.	END=7424065;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.982641:7,7:6-8,6-8:10,7,0,0:7,10:NULL:108.711:366.612,131.36:0.466294,0.466294:2.7639e-16,0.0114908,0.988532	0/0:25:0.998037:7,7:6-8,6-8:13,10,0,0:7,13:NULL:137.626:326.675,113.385:0.344122,0.344122:1.78319e-21,0.00109507,0.998907
+chr1	7425278	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7425323;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.94803:23,23:21-24,21-24:9,16,0,16:23,9:8,1|9,2|10,2|11,1|12,1|13,1|15,1|17,2|20,1|21,1|22,3:322.991:366.612,131.36:0.570833,0.570833:8.83532e-11,0.0119463,0.988078	0/0:63:0.513251:23,23:21-27,21-27:20,24,0,18:21,3|22,4|23,11|24,2:5,4|9,1|10,1|11,3|14,2|15,4|19,1|20,2:473.466:326.675,113.385:1.61365,1.61365:3.31356e-10,0.476846,0.523247
+chr1	7426578	.	TCTTTCTTTCTT	.	.	.	END=7426589;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999873:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.935:366.612,131.36:0.0,0.0:0.0,7.34154e-05,0.999926	0/0:12:0.924749:3,3:3-3,3-3:7,5,0,0:3,7:NULL:72.4247:326.675,113.385:0.0,0.0:1.24085e-20,0.0349296,0.965131
+chr1	7426730	.	TATATATATATATATATATATATATATATATATATATATATATATATA	TA	.	.	END=7426777;RU=ta;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0256329:1,1:1-1,1-1:0,14,0,0:NULL:NULL:123.961:366.612,131.36:0.0,0.0:0.866772,0.131153,0.00217551	1/1:4:0.00195412:1,1:1-1,1-1:0,4,0,0:NULL:NULL:34.6221:326.675,113.385:0.0,0.0:0.371713,0.539518,0.0888731
+chr1	7431725	.	ATTATTATTATT	.	.	.	END=7431736;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999499:4,4:4-4,4-4:14,11,0,4:4,14:3,4:187.286:366.612,131.36:0.0,0.0:7.8315e-37,0.000191455,0.999811	0/0:35:1.0:4,4:4-4,4-4:26,9,0,0:4,26:NULL:183.414:326.675,113.385:0.0,0.0:0.0,1.08437e-07,1.0
+chr1	7440876	.	TTCCTTCCTTCC	.	.	.	END=7440887;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:213.709:366.612,131.36:0.0,0.0:0.0,4.1056e-09,1.0	0/0:40:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:249.022:326.675,113.385:0.0,0.0:0.0,1.88782e-06,1.0
+chr1	7440950	.	AAACAAACAAAC	.	.	.	END=7440961;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:155.473:366.612,131.36:0.0,0.0:0.0,7.67418e-08,1.0	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:221.718:326.675,113.385:0.0,0.0:0.0,7.89085e-06,0.999994
+chr1	7444083	.	ATATATATATATAT	.	.	.	END=7444096;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.515785:7,7:6-8,6-8:4,9,0,0:7,4:NULL:101.366:366.612,131.36:0.820887,0.820887:1.31889e-07,0.297634,0.702376	0/0:10:0.952448:7,7:7-7,7-7:8,2,0,0:7,8:NULL:49.8835:326.675,113.385:0.0,0.0:2.21982e-14,0.0249351,0.975111
+chr1	7447332	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7447355;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:6,6:6-6,6-6:29,25,0,5:6,29:3,4|4,1:381.561:366.612,131.36:0.0,0.0:0.0,1.29042e-08,1.0	0/0:39:1.0:6,6:6-6,6-6:27,7,0,5:6,27:2,2|3,1|4,1|5,1:210.645:326.675,113.385:0.0,0.0:0.0,4.00341e-08,1.0
+chr1	7449579	.	TCTGTCTCTGTCTCTGTCTCTGTC	.	.	.	END=7449602;RU=tctgtc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:323.571:366.612,131.36:0.0,0.0:0.0,7.14102e-07,1.0	0/0:29:0.999342:4,4:3-4,3-4:15,13,0,0:4,15:NULL:180.716:326.675,113.385:0.311527,0.311527:6e-45,0.000577142,0.999424
+chr1	7450712	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7450769;RU=tc;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.325423:26,26:10-26,10-26:6,14,0,10:25,2|26,4:6,1|8,2|9,1|12,1|15,2|17,2|18,1:238.154:366.612,131.36:6.80582,6.80582:0.989552,0.0104685,2.18193e-10	2/2:20:0.0285637:32,32:25-32,25-32:0,7,0,9:NULL:4,2|5,1|8,1|13,1|27,2|28,1|32,1:141.607:326.675,113.385:1.50058,1.50058:9.70053e-09,0.34967,0.650364
+chr1	7453756	.	AGCAGCAGCAGC	.	.	.	END=7453767;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:286.722:366.612,131.36:0.0,0.0:0.0,3.87272e-09,1.0	0/0:44:1.0:4,4:4-4,4-4:27,17,0,0:4,27:NULL:265.752:326.675,113.385:0.0,0.0:0.0,1.23179e-07,1.0
+chr1	7456598	.	TTTATTTATTTA	.	.	.	END=7456609;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:269.69:366.612,131.36:0.0,0.0:0.0,2.51275e-07,1.0	0/0:34:0.999931:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.423:326.675,113.385:0.0,0.0:0.0,6.4736e-05,0.999939
+chr1	7460799	.	ATTTATTTATTT	.	.	.	END=7460810;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:37,23,0,0:3,37:NULL:352.908:366.612,131.36:0.0,0.0:0.0,7.23043e-11,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.937:326.675,113.385:0.0,0.0:0.0,6.82864e-07,1.0
+chr1	7461208	.	CACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACA	.	.	END=7461233;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:69:0.902457:19,19:6-20,6-20:21,29,0,18:16,2|18,3|19,14|20,2:5,1|7,1|8,2|11,3|14,2|16,4|17,4|18,1:531.308:366.612,131.36:4.86734,4.86734:0.0,2.49675e-08,1.0	0/0:62:0.99988:13,13:4-13,4-13:29,18,0,13:12,4|13,25:5,1|6,2|7,1|8,1|9,2|10,3|11,1|12,1|13,1:406.177:326.675,113.385:2.43794,2.43794:8.67065e-38,0.000120026,0.99988
+chr1	7466892	.	TAAATAAATAAA	.	.	.	END=7466903;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:20,10,0,3:3,20:2,2|3,1:193.314:366.612,131.36:0.0,0.0:0.0,2.12392e-06,1.0	0/0:24:0.999881:3,3:3-3,3-3:16,8,0,0:3,16:NULL:134.134:326.675,113.385:0.0,0.0:0.0,7.06065e-05,0.999933
+chr1	7466980	.	AAAGTTTAAAGTTTAAAGTTT	.	.	.	END=7467000;RU=aaagttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:230.609:366.612,131.36:0.0,0.0:0.0,5.97646e-06,0.999995	0/0:19:0.999723:3,3:3-3,3-3:15,4,0,0:3,15:NULL:96.7021:326.675,113.385:0.0,0.0:0.0,0.000150997,0.99985
+chr1	7468038	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC,TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=7468113;RU=tttc;PERIOD=4;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.0273217:21,21:17-23,17-23:0,12,0,15:NULL:3,2|4,1|5,1|8,1|9,2|10,3|13,1|15,2|19,1|21,1:217.9:366.612,131.36:2.02262,2.02262:5.75985e-16,0.383764,0.616294	1/1:25:0.020238:16,16:7-19,7-19:0,7,0,13:NULL:7,2|10,1|11,2|12,5|13,1|14,1|16,1:158.469:326.675,113.385:3.56232,3.56232:0.312801,0.5122,0.175013
+chr1	7468830	.	AAAACAAAACAAAAC	.	.	.	END=7468844;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999744:3,3:3-3,3-3:15,16,0,2:3,15:2,2:222.579:366.612,131.36:0.0,0.0:0.0,0.00017591,0.999826	0/0:24:0.999755:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.313:326.675,113.385:0.0,0.0:0.0,0.00016387,0.999841
+chr1	7469326	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7469375;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:53:0.532474:25,30:19-27,19-31:10,24,0,17:19,2|25,6|27,2:4,1|7,2|8,2|9,3|12,1|13,1|16,1|18,1|19,1|22,1|26,2|30,1:423.149:366.612,131.36:1.50195,2.63117:3.63299e-29,2.26825e-07,1.0	0/0:50:0.984792:25,25:20-27,20-27:11,23,0,12:25,11:6,2|7,2|9,1|13,1|14,2|18,1|19,2|25,1:366.528:326.675,113.385:1.77125,1.77125:1.29155e-26,0.00944488,0.990575
+chr1	7469376	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7469415;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.287036:16,19:16-16,16-19:7,20,0,17:16,7:4,1|6,2|8,2|9,1|10,4|11,1|15,5|18,1:349.347:366.612,131.36:0.19802,1.12645:0.566,0.434096,8.58628e-15	0/0:52:0.920153:20,20:20-20,20-20:7,24,0,21:20,7:5,2|6,1|7,4|8,1|9,1|10,1|11,2|12,2|14,2|15,2|16,1|18,1|19,1:420.393:326.675,113.385:0.0,0.0:4.29867e-09,0.0449381,0.955134
+chr1	7473898	.	AAACAAACAAAC	.	.	.	END=7473909;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.259:366.612,131.36:0.0,0.0:0.0,7.52061e-07,1.0	0/0:25:0.999257:3,3:3-3,3-3:14,11,0,0:3,14:NULL:154.952:326.675,113.385:0.0,0.0:9.73e-43,0.000477853,0.999523
+chr1	7475210	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=7475227;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.878:366.612,131.36:0.0,0.0:0.0,1.86616e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:177.338:326.675,113.385:0.0,0.0:0.0,3.60068e-07,1.0
+chr1	7475765	.	TATTATTATTAT	.	.	.	END=7475776;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.997794:4,4:4-4,4-4:12,15,0,0:4,12:NULL:188.056:366.612,131.36:0.0,0.0:1.78865e-40,0.00138378,0.998619	0/0:17:0.993907:4,4:4-4,4-4:11,6,0,0:4,11:NULL:98.0058:326.675,113.385:0.0,0.0:7.5814e-37,0.00390186,0.99611
+chr1	7482108	.	TTTTTTGTTTTTTGTTTTTTGTTTTTTG	TTTTTTGTTTTTTGTTTTTTG	.	.	END=7482135;RU=ttttttg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.0593018:3,3:3-3,3-3:0,0,0,4:NULL:3,4:26.8546:366.612,131.36:0.0,0.0:0.0740912,0.397935,0.528156	0/0:25:0.999114:4,4:4-4,4-4:13,7,0,5:4,13:2,1|3,4:149.54:326.675,113.385:0.0,0.0:3.87466e-38,0.000414173,0.99959
+chr1	7482227	.	ACCCACCCACCC	.	.	.	END=7482238;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.783895:3,3:3-3,3-3:5,14,0,0:3,5:NULL:136.395:366.612,131.36:0.0,0.0:3.03597e-14,0.117362,0.882742	0/0:26:0.951091:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.78:326.675,113.385:0.19802,0.19802:4.98595e-22,0.0337134,0.966351
+chr1	7492065	.	GGAGGGAGGGAG	.	.	.	END=7492076;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:214.218:366.612,131.36:0.0,0.0:0.0,4.3342e-07,1.0	0/0:30:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:154.508:326.675,113.385:0.0,0.0:0.0,5.77157e-07,1.0
+chr1	7493936	.	TAAATAAATAAATAAA	.	.	.	END=7493951;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:189.401:366.612,131.36:0.0,0.0:0.0,4.13945e-07,1.0	0/0:23:0.999022:4,4:4-4,4-4:13,6,0,4:4,13:3,4:131.793:326.675,113.385:0.0,0.0:1.34938e-38,0.000363209,0.999637
+chr1	7495072	.	AAAATAAAATAAAAT	.	.	.	END=7495086;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999951:3,3:3-3,3-3:18,22,0,0:3,18:NULL:271.354:366.612,131.36:0.0,0.0:0.0,4.36311e-05,0.999957	0/0:35:0.999969:3,3:3-3,3-3:18,17,0,0:3,18:NULL:232.209:326.675,113.385:0.0,0.0:0.0,3.56805e-05,0.999964
+chr1	7497345	.	CAAACAAACAAA	.	.	.	END=7497356;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,22,0,0:3,24:NULL:292.966:366.612,131.36:0.0,0.0:0.0,5.38177e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.094:326.675,113.385:0.0,0.0:0.0,2.8124e-06,1.0
+chr1	7500168	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=7500193;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:17:0.59259:13,14:12-14,12-14:5,11,0,0:13,2|14,3:NULL:130.067:366.612,131.36:0.742244,0.868696:1.86284e-05,0.116728,0.88336	1/2:16:0.419391:12,14:12-13,12-14:9,7,0,0:12,3|13,3|14,3:NULL:116.493:326.675,113.385:0.538126,0.588255:0.000815859,0.579807,0.419465
+chr1	7502120	.	ACACACACACACAC	.	.	.	END=7502133;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:75:1.0:7,7:7-7,7-7:41,30,0,3:7,39|8,2:4,1|5,1|6,1:478.922:366.612,131.36:0.0,0.0:0.0,6.18289e-12,1.0	0/0:50:0.999841:7,7:6-7,6-7:28,19,0,3:6,3|7,25:4,1|5,2:329.444:326.675,113.385:0.253975,0.253975:0.0,0.000161628,0.999841
+chr1	7507479	.	TTTTAAATTTTAAATTTTAAA	.	.	.	END=7507499;RU=ttttaaa;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999978:3,3:3-3,3-3:18,10,0,0:3,18:NULL:168.716:366.612,131.36:0.0,0.0:0.0,2.90937e-05,0.999972	0/0:22:0.997651:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.947:326.675,113.385:0.0,0.0:1.18906e-35,0.00174143,0.998262
+chr1	7512509	.	TAAATAAATAAA	.	.	.	END=7512520;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998885:3,3:3-3,3-3:13,13,0,0:3,13:NULL:173.123:366.612,131.36:0.0,0.0:3.62e-43,0.00064395,0.999361	0/0:18:0.995942:3,3:3-3,3-3:11,7,0,0:3,11:NULL:105.003:326.675,113.385:0.0,0.0:1.63034e-36,0.00216985,0.997837
+chr1	7518438	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7518481;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.889935:19,19:19-19,19-19:7,6,0,11:19,7:7,2|8,3|12,1|13,1|18,4:174.41:366.612,131.36:0.0,0.0:0.985099,0.0149306,8.37e-15	0/0:34:0.769607:22,22:21-22,21-22:9,11,0,14:21,2|22,7:5,2|6,1|7,1|11,2|12,1|13,2|14,1|15,2|16,2:254.253:326.675,113.385:0.398507,0.398507:6.15149e-07,0.210266,0.789782
+chr1	7520010	.	TGTGTGTGTGTGTG	TGTGTGTGTGTG	.	.	END=7520023;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:38:1.0:6,7:6-6,7-7:19,18,0,0:6,8|7,11:NULL:255.836:366.612,131.36:0.0,0.0:3.15511e-09,1.0,1.36487e-11	0/0:36:1.0:7,7:7-7,7-7:28,8,0,0:7,28:NULL:187.502:326.675,113.385:0.0,0.0:4.34125e-35,6.38469e-08,1.0
+chr1	7520572	.	AAACAAAACAAAACA	.	.	.	END=7520586;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999963:3,3:3-3,3-3:18,10,0,0:3,18:NULL:166.883:366.612,131.36:0.0,0.0:0.0,3.36053e-05,0.99997	0/0:31:1.0:3,3:3-3,3-3:25,6,0,0:3,25:NULL:150.359:326.675,113.385:0.0,0.0:0.0,1.45848e-07,1.0
+chr1	7522440	.	ATACATACATAC	.	.	.	END=7522451;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.980761:3,3:3-3,3-3:9,10,0,0:3,9:NULL:122.028:366.612,131.36:0.0,0.0:1.1521e-29,0.0106761,0.989349	0/0:20:0.999312:3,3:3-3,3-3:14,6,0,0:3,14:NULL:110.981:326.675,113.385:0.0,0.0:0.0,0.000350902,0.999651
+chr1	7522568	.	TATATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=7522619;RU=ta;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:5:0.0384164:25,25:23-26,23-26:0,4,0,0:NULL:NULL:41.887:366.612,131.36:1.03142,1.03142:0.310425,0.502293,0.187294	1/1:1:0.020438:23,23:26-26,26-26:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
+chr1	7522982	.	TTCTTTCTTTCTTTCT	.	.	.	END=7522997;RU=ttct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997267:4,4:4-4,4-4:11,10,0,3:4,11:3,3:159.691:366.612,131.36:0.0,0.0:2.07316e-37,0.00102804,0.998975	0/0:29:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:147.627:326.675,113.385:0.0,0.0:0.0,1.34801e-06,1.0
+chr1	7524309	.	TAAAATAAAATAAAATAAAATAAAA	.	.	.	END=7524333;RU=taaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999598:5,5:5-5,5-5:16,20,0,0:5,16:NULL:250.858:366.612,131.36:0.0,0.0:1e-45,0.000380237,0.999621	0/0:23:0.959119:5,5:5-5,5-5:7,11,0,5:5,7:4,5:166.74:326.675,113.385:0.0,0.0:2.65051e-20,0.0202231,0.979819
+chr1	7524638	.	AACAAACAAACAAACAAACA	.	.	.	END=7524657;RU=aaca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.99787:5,5:5-5,5-5:12,5,0,3:5,12:4,3:119.09:366.612,131.36:0.0,0.0:6.85631e-34,0.000774939,0.999227	0/0:40:1.0:5,5:3-5,3-5:24,9,0,6:5,24:3,2|4,4:220.454:326.675,113.385:0.43384,0.43384:0.0,1.91326e-07,1.0
+chr1	7527088	.	TTTTATTTTATTTTA	.	.	.	END=7527102;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999917:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.538:366.612,131.36:0.0,0.0:0.0,5.55056e-05,0.999948	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:198.701:326.675,113.385:0.0,0.0:0.0,6.87673e-06,0.999994
+chr1	7527397	.	AATAAATAAATA	.	.	.	END=7527408;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999312:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.911:366.612,131.36:0.0,0.0:0.0,0.000414194,0.99959	0/0:24:1.0:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.585:326.675,113.385:0.0,0.0:0.0,5.10849e-06,0.999995
+chr1	7532994	.	TCTCTCTCTCTCTCTC	.	.	.	END=7533009;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.998564:8,8:6-8,6-8:25,14,0,4:7,3|8,22:4,2|6,1|7,1:268.724:366.612,131.36:0.479355,0.479355:7.15827e-37,0.00144231,0.998564	0/0:65:1.0:8,8:8-8,8-8:32,24,0,8:8,32:5,3|6,2|7,3:406.392:326.675,113.385:0.0,0.0:0.0,1.17275e-09,1.0
+chr1	7538575	.	TTAATTAATTAATTAA	.	.	.	END=7538590;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999827:4,4:4-4,4-4:17,16,0,0:4,17:NULL:213.35:366.612,131.36:0.0,0.0:0.0,0.000140341,0.999864	0/0:25:0.999905:4,4:4-4,4-4:17,8,0,0:4,17:NULL:137.243:326.675,113.385:0.0,0.0:0.0,6.42069e-05,0.99994
+chr1	7542839	.	TCTCCTCTCCTCTCC	.	.	.	END=7542853;RU=tctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:225.92:366.612,131.36:0.0,0.0:0.0,2.00965e-06,1.0	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:172.591:326.675,113.385:0.0,0.0:0.0,8.90944e-08,1.0
+chr1	7544211	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=7544230;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998288:4,4:4-4,4-4:12,10,0,4:4,12:3,4:168.562:366.612,131.36:0.0,0.0:3.492e-37,0.000736078,0.999265	0/0:32:1.0:4,4:4-4,4-4:19,11,0,2:4,19:3,2:191.689:326.675,113.385:0.0,0.0:0.0,7.93364e-06,0.999994
+chr1	7544358	.	ATATATATATATATAT	.	.	.	END=7544373;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.778181:8,8:8-10,8-10:16,3,0,0:8,14|10,2:NULL:101.556:366.612,131.36:0.932167,0.932167:2.9458e-20,0.000123362,0.999879	0/0:23:0.997822:8,8:8-8,8-8:13,10,0,0:8,13:NULL:149.317:326.675,113.385:0.0,0.0:2.6257e-17,0.00140249,0.998603
+chr1	7546856	.	TTTGTTTGTTTG	.	.	.	END=7546867;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,18,0,2:3,29:2,2:296.504:366.612,131.36:0.0,0.0:0.0,6.73998e-09,1.0	0/0:45:1.0:3,3:3-3,3-3:32,13,0,0:3,32:NULL:240.066:326.675,113.385:0.0,0.0:0.0,1.40992e-09,1.0
+chr1	7549821	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7549896;RU=ag;PERIOD=2;REF=38.0;EXPTHRESH=38	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:25:0.0346401:43,43:32-43,32-43:0,10,0,15:NULL:5,2|6,1|8,1|9,1|13,1|18,1|25,1|26,1|27,1|29,1|30,1|32,1|39,1|40,1:210.818:366.612,131.36:3.20615,3.20615:2.41683e-15,0.418057,0.582021	1/1:29:0.240765:37,37:35-37,35-37:2,14,0,13:37,2:5,1|8,1|9,1|14,2|15,2|16,1|19,1|24,1|27,1|30,1|34,1:243.499:326.675,113.385:0.43384,0.43384:0.619148,0.35909,0.0218496
+chr1	7550748	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=7550765;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,14,0,2:3,23:2,2:239.754:366.612,131.36:0.0,0.0:0.0,6.73102e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.669:326.675,113.385:0.0,0.0:0.0,2.4095e-07,1.0
+chr1	7554806	.	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=7554849;RU=tatt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999608:9,9:9-9,9-9:15,12,0,5:9,15:3,1|5,2|7,2:210.091:366.612,131.36:0.0,0.0:0.999896,0.000104551,7.20019e-34	0/0:31:0.995921:11,11:11-11,11-11:11,10,0,10:11,11:5,1|6,2|7,2|9,1|10,4:208.914:326.675,113.385:0.0,0.0:1.39714e-23,0.00136196,0.998641
+chr1	7559127	.	GTTAATGGTTAATGGTTAATGGTTAATG	.	.	.	END=7559154;RU=gttaatg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:20,11,0,5:4,20:3,5:213.852:366.612,131.36:0.0,0.0:0.0,3.7562e-06,1.0	0/0:38:0.999927:4,4:4-4,4-4:16,14,0,8:4,16:3,8:247.545:326.675,113.385:0.0,0.0:0.0,5.09107e-05,0.999949
+chr1	7560900	.	TTTATTTATTTATTTATTTA	.	.	.	END=7560919;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:5,5:5-5,5-5:26,9,0,3:5,26:4,3:204.862:366.612,131.36:0.0,0.0:0.0,4.48993e-08,1.0	0/0:41:1.0:5,5:5-5,5-5:30,8,0,2:5,30:3,1|4,1:207.471:326.675,113.385:0.0,0.0:0.0,5.3766e-09,1.0
+chr1	7570199	.	TTGTTGTTGTTG	.	.	.	END=7570210;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999875:4,4:4-4,4-4:16,11,0,3:4,16:3,3:187.712:366.612,131.36:0.0,0.0:0.0,5.7529e-05,0.999942	0/0:33:1.00001:4,4:4-4,4-4:21,12,0,0:4,21:NULL:193.419:326.675,113.385:0.0,0.0:0.0,3.83183e-06,1.0
+chr1	7579482	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7579505;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.99029:8,8:2-8,2-8:10,21,0,10:8,10:2,3|3,1|5,1|7,5:307.104:366.612,131.36:2.89082,2.89082:0.0,0.000535287,0.999469	0/0:40:0.995425:6,6:5-6,5-6:22,11,0,7:5,2|6,20:2,1|3,1|4,1|5,4:251.596:326.675,113.385:0.398507,0.398507:0.0,0.00459544,0.995416
+chr1	7584141	.	AACAACAACAAC	.	.	.	END=7584152;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:24,12,0,0:4,24:NULL:208.236:366.612,131.36:0.0,0.0:0.0,8.88332e-07,1.0	0/0:29:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:152.193:326.675,113.385:0.0,0.0:0.0,3.31203e-06,1.0
+chr1	7586036	.	TGGGTGGGTGGG	.	.	.	END=7586047;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:25,21,0,0:3,25:NULL:286.938:366.612,131.36:0.0,0.0:0.0,2.03703e-07,1.0	0/0:31:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:197.905:326.675,113.385:0.0,0.0:0.0,4.50361e-05,0.999956
+chr1	7590013	.	ATGTATGTATGTATGTATGTATGTATGT	ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	END=7590040;RU=atgt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:1.0:11,11:11-11,11-11:20,20,0,22:11,20:4,1|5,2|6,2|7,4|8,5|9,1|10,7:432.91:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:53:1.0:7,7:7-7,7-7:27,15,0,11:7,27:2,1|3,2|4,2|5,3|6,3:334.025:326.675,113.385:0.0,0.0:6.34877e-36,7.12813e-08,1.0
+chr1	7591071	.	GAGGAGGAGGAGGAGGAG	.	.	.	END=7591088;RU=gag;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999987:6,6:6-6,6-6:20,28,0,0:6,20:NULL:346.721:366.612,131.36:0.0,0.0:0.0,2.01279e-05,0.99998	0/0:48:1.00001:6,6:6-6,6-6:22,24,0,2:6,22:4,1|5,1:315.295:326.675,113.385:0.0,0.0:0.0,1.8212e-06,1.0
+chr1	7592319	.	CAAACAAACAAA	.	.	.	END=7592330;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.998935:3,3:3-3,3-3:13,13,0,3:3,13:2,3:195.04:366.612,131.36:0.0,0.0:8.418e-42,0.000410217,0.999591	0/0:14:0.997808:3,3:3-3,3-3:12,2,0,0:3,12:NULL:65.2842:326.675,113.385:0.0,0.0:6.32806e-39,0.000946074,0.999058
+chr1	7593902	.	AAACAAACAAACAAAC	.	.	.	END=7593917;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:4,4:4-4,4-4:31,28,0,3:4,31:3,3:401.189:366.612,131.36:0.0,0.0:0.0,1.30138e-09,1.0	0/0:44:1.00001:4,4:4-4,4-4:22,18,0,4:4,22:2,1|3,3:291.754:326.675,113.385:0.0,0.0:0.0,2.25469e-06,1.0
+chr1	7604547	.	TTAATTAATTAA	.	.	.	END=7604558;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.99893:3,3:3-3,3-3:13,27,0,0:3,13:NULL:298.801:366.612,131.36:0.0,0.0:2.38039e-40,0.000887786,0.999118	0/0:33:0.999946:3,3:3-3,3-3:17,16,0,0:3,17:NULL:206.927:326.675,113.385:0.0,0.0:0.0,4.86683e-05,0.999955
+chr1	7606004	.	CTGCTGCTGCTG	CTG	.	.	END=7606015;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.000327754:1,1:1-1,1-1:0,1,0,0:NULL:NULL:8.70265:366.612,131.36:0.0,0.0:0.0027931,0.119525,0.877789	0/0:50:1.0:4,4:4-4,4-4:33,17,0,0:4,33:NULL:284.495:326.675,113.385:0.0,0.0:0.0,1.60651e-09,1.0
+chr1	7614755	.	TCCTCCTCCTCC	.	.	.	END=7614766;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:4,4:4-4,4-4:32,19,0,2:4,32:3,2:316.87:366.612,131.36:0.0,0.0:0.0,9.31883e-10,1.0	0/0:55:1.0:4,4:4-4,4-4:39,13,0,3:4,39:3,3:289.997:326.675,113.385:0.0,0.0:0.0,7.01508e-12,1.0
+chr1	7618269	.	AATAAATAAATA	.	.	.	END=7618280;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:244.391:366.612,131.36:0.0,0.0:0.0,9.92004e-08,1.0	0/0:27:1.0:3,3:3-3,3-3:25,2,0,0:3,25:NULL:115.743:326.675,113.385:0.0,0.0:0.0,1.26847e-07,1.0
+chr1	7621644	.	CTTTCTTTCTTT	.	.	.	END=7621655;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995956:3,3:3-3,3-3:11,19,0,0:3,11:NULL:225.21:366.612,131.36:0.0,0.0:8.52516e-38,0.00211426,0.99789	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.959:326.675,113.385:0.0,0.0:0.0,1.43963e-07,1.0
+chr1	7624737	.	CAACAACAACAACAACAACAACAACAACAA	CAACAACAACAACAACAACAACAACAACAACAACAA	.	.	END=7624766;RU=caa;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.998272:12,12:9-12,9-12:14,18,0,7:12,14:4,1|5,1|6,1|7,1|10,3:281.034:366.612,131.36:1.03993,1.03993:0.0,0.000371058,0.99963	0/0:40:1.0:10,10:10-10,10-10:24,9,0,6:10,24:6,2|7,2|9,2:226.838:326.675,113.385:0.0,0.0:0.0,2.91704e-07,1.0
+chr1	7626618	.	TTATTTATTTATTTAT	.	.	.	END=7626633;RU=ttat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:4,4:4-4,4-4:32,25,0,4:4,32:2,1|3,3:372.388:366.612,131.36:0.0,0.0:0.0,1.15553e-09,1.0	0/0:24:1.0:4,4:4-4,4-4:19,3,0,2:4,19:2,1|3,1:115.882:326.675,113.385:0.0,0.0:0.0,6.68964e-06,0.999994
+chr1	7630404	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7630451;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.380134:23,23:21-24,21-24:6,9,0,11:22,2|23,4:6,2|7,1|8,1|11,2|14,1|16,1|17,1|22,2:205.339:366.612,131.36:0.851485,0.851485:0.92278,0.0772677,4.64652e-05	0/2:58:0.983016:24,25:23-24,23-25:21,13,0,23:23,8|24,11|25,2:4,1|6,1|8,1|10,2|11,1|12,1|14,1|15,1|16,1|17,3|18,2|20,1|21,2|22,2|23,1|24,1|25,1:429.446:326.675,113.385:0.475866,0.848371:1.52509e-19,0.0136464,0.986385
+chr1	7632861	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7632920;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:35:0.999725:14,15:14-14,14-15:6,17,0,12:14,4|15,2:3,1|4,1|5,2|6,1|8,1|9,3|11,1|12,1|13,1:269.527:366.612,131.36:0.14072,0.311527:0.000176912,0.999826,7.76206e-08	0/0:62:0.930921:15,15:14-15,14-15:8,31,0,22:15,8:3,1|4,4|5,2|6,1|7,1|8,1|9,4|10,3|11,4|13,1:479.498:326.675,113.385:0.499387,0.499387:6.14073e-22,0.0616203,0.938469
+chr1	7633359	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7633396;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.420345:22,27:20-22,20-27:7,15,0,13:20,3|22,4:7,1|8,1|9,1|11,2|13,1|16,1|17,2|18,2|20,1|27,1:289.539:366.612,131.36:0.651061,3.31844:1.51187e-26,4.74397e-08,1.0	0/0:21:0.79191:19,19:19-19,19-19:6,7,0,8:19,6:8,1|10,1|12,2|13,1|15,1|17,1|18,1:157.17:326.675,113.385:0.0,0.0:1.67294e-08,0.0692101,0.930883
+chr1	7633397	.	ATTAATTAATTA	ATTAATTAATTAATTA	.	.	END=7633408;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.605946:4,4:1-4,1-4:5,12,0,0:4,5:NULL:133.234:366.612,131.36:0.585081,0.585081:1.87865e-14,0.192351,0.807701	0/0:17:0.99704:3,3:3-3,3-3:12,5,0,0:3,12:NULL:96.7465:326.675,113.385:0.0,0.0:1.72428e-21,0.00151512,0.998489
+chr1	7637624	.	CACACACACACACA	CACACACACACACACA,CACACACACACACACACA	.	.	END=7637637;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.999391:8,9:8-10,9-10:12,25,0,0:8,3|9,7|10,2:NULL:285.742:366.612,131.36:0.683384,0.21692:3.87704e-34,1.49308e-06,1.0	0/0:38:0.999836:7,7:7-9,7-9:27,10,0,0:7,24|8,3:NULL:204.461:326.675,113.385:0.405095,0.405095:1.08056e-35,1.06684e-07,1.0
+chr1	7637849	.	TAATAATAATAA	.	.	.	END=7637860;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:21,28,0,0:4,21:NULL:332.138:366.612,131.36:0.0,0.0:0.0,4.61686e-06,0.999995	0/0:37:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:226.901:326.675,113.385:0.0,0.0:0.0,1.6664e-06,1.0
+chr1	7642243	.	AACAACAACAACAACAACAACAACAAC	AACAACAACAACAACAACAACAACAACAAC	.	.	END=7642269;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.99301:10,10:9-10,9-10:18,14,0,4:9,2|10,16:5,2|7,1|9,1:244.852:366.612,131.36:0.323567,0.323567:0.0,1.39032e-05,0.999987	0/0:32:0.994938:9,9:9-10,9-10:11,13,0,7:9,11:4,2|6,1|7,1|8,3:214.352:326.675,113.385:0.46122,0.46122:3.66479e-24,0.00171286,0.998292
+chr1	7644073	.	GGGTGGGTGGGT	.	.	.	END=7644084;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.990731:3,3:3-3,3-3:11,24,0,2:3,11:2,2:274.989:366.612,131.36:0.0,0.0:3.1445e-32,0.00562824,0.994385	0/0:48:0.996096:3,3:3-3,3-3:12,36,0,0:3,12:NULL:366.483:326.675,113.385:0.0,0.0:1.17169e-35,0.00335808,0.996649
+chr1	7651115	.	TTTCTTTCTTTC	.	.	.	END=7651126;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999978:3,3:3-3,3-3:18,16,0,0:3,18:NULL:223.168:366.612,131.36:0.0,0.0:0.0,2.81898e-05,0.999972	0/0:26:0.99948:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.136:326.675,113.385:0.0,0.0:0.0,0.000349136,0.999652
+chr1	7652360	.	GAGAGAGAGAGAGAGAGA	GAGAGAGA,GAGAGAGAGAGAGA	.	.	END=7652377;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:49:0.999988:7,9:7-9,9-9:27,17,0,4:7,10|9,17:5,1|8,3:316.932:366.612,131.36:0.472766,0.0:5.84026e-33,0.999986,1.46053e-05	1/0:45:0.929022:4,9:4-9,9-9:29,15,0,0:4,5|7,5|9,19:NULL:288.077:326.675,113.385:1.79969,0.0:1.63191e-37,0.99934,0.000661574
+chr1	7658674	.	TTTATTTATTTA	.	.	.	END=7658685;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:221.295:366.612,131.36:0.0,0.0:0.0,1.78929e-06,1.0	0/0:48:1.0:3,3:3-3,3-3:30,12,0,6:3,30:2,6:271.917:326.675,113.385:0.0,0.0:0.0,2.61691e-09,1.0
+chr1	7660964	.	TGCCTGCCTGCCTGCC	.	.	.	END=7660979;RU=tgcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999939:4,4:4-4,4-4:17,12,0,4:4,17:3,4:203.556:366.612,131.36:0.0,0.0:0.0,2.74925e-05,0.999972	0/0:27:0.999887:4,4:3-4,3-4:16,7,0,3:4,16:2,1|3,2:152.085:326.675,113.385:0.419363,0.419363:0.0,5.94852e-05,0.999941
+chr1	7660996	.	TCTTTCTTTCTTTCTT	.	.	.	END=7661011;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992254:4,4:4-4,4-4:11,11,0,0:4,11:NULL:141.609:366.612,131.36:0.0,0.0:4.56328e-37,0.0052796,0.994732	0/0:22:0.999809:4,4:4-4,4-4:16,6,0,0:4,16:NULL:120.568:326.675,113.385:0.0,0.0:0.0,0.000139604,0.999864
+chr1	7661246	.	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTG	.	.	END=7661265;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.829463:9,9:8-12,8-12:15,17,0,2:8,2|9,13:6,1|7,1:244.023:366.612,131.36:1.45844,1.45844:0.999522,0.000480569,7.49084e-22	0/0:37:0.970158:10,10:10-11,10-11:20,12,0,5:10,17|11,3:5,1|6,1|7,1|8,2:243.239:326.675,113.385:0.374147,0.374147:2.30016e-25,9.69941e-06,0.999993
+chr1	7661271	.	TTGTTGTTGTTG	TTGTTGTTGTTGTTG	.	.	END=7661282;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:38:0.999729:4,5:4-5,5-5:18,20,0,0:4,3|5,15:NULL:266.92:366.612,131.36:0.425627,0.0:0.0,6.53169e-07,1.0	0/0:37:1.0:4,4:4-4,4-4:26,11,0,0:4,26:NULL:207.408:326.675,113.385:0.0,0.0:0.0,1.57076e-07,1.0
+chr1	7667977	.	GGGGTGGGGTGGGGT	.	.	.	END=7667991;RU=ggggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:3,3:3-3,3-3:34,25,0,3:3,34:2,3:373.822:366.612,131.36:0.0,0.0:0.0,3.26358e-10,1.0	0/0:66:1.0:3,3:3-3,3-3:38,25,0,3:3,38:2,3:409.533:326.675,113.385:0.0,0.0:0.0,2.39564e-11,1.0
+chr1	7668272	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7668301;RU=ga;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.238356:24,29:23-26,26-30:4,11,0,7:23,2|24,2:8,1|15,1|17,1|19,1|28,3:182.126:366.612,131.36:0.77595,0.915079:0.0,0.0,1.0	0/0:63:0.999955:15,15:15-15,15-15:33,18,0,12:14,5|15,28:5,1|7,1|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,1:408.274:326.675,113.385:0.0990099,0.0990099:3.48e-39,4.78434e-05,0.999955
+chr1	7668463	.	GGAGAGGAGAGGAGA	.	.	.	END=7668477;RU=ggaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999726:3,3:3-3,3-3:15,6,0,0:3,15:NULL:111.479:366.612,131.36:0.0,0.0:2.9388e-41,0.000137001,0.999865	0/0:22:0.884408:3,3:3-3,3-3:6,16,0,0:3,6:NULL:168.509:326.675,113.385:0.0,0.0:8.96207e-17,0.0784737,0.921624
+chr1	7678104	.	TGTTTTGTTTTGTTT	.	.	.	END=7678118;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.990119:3,3:3-3,3-3:10,6,0,0:3,10:NULL:96.8139:366.612,131.36:0.0,0.0:1.51957e-31,0.00544876,0.994565	0/0:25:0.999438:3,3:3-3,3-3:14,11,0,0:3,14:NULL:162.108:326.675,113.385:0.0,0.0:2.4e-44,0.00034485,0.999659
+chr1	7684673	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7684693;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.992494:7,7:7-7,7-7:11,8,0,2:7,11:3,1|6,1:134.095:366.612,131.36:0.0,0.0:1.22226e-33,0.00318471,0.996822	0/0:29:0.998834:7,7:7-7,7-7:13,12,0,4:7,13:4,1|5,2|6,1:193.784:326.675,113.385:0.0,0.0:1.27248e-39,0.000558105,0.999446
+chr1	7686794	.	TTATTTATTTAT	.	.	.	END=7686805;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999415:3,3:3-3,3-3:14,11,0,0:3,14:NULL:159.567:366.612,131.36:0.0,0.0:0.0,0.000336862,0.999666	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:156.467:326.675,113.385:0.0,0.0:0.0,2.85844e-07,1.0
+chr1	7688060	.	TATATTATATTATAT	.	.	.	END=7688074;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997224:3,3:3-3,3-3:12,12,0,0:3,12:NULL:159.819:366.612,131.36:0.0,0.0:3.5616e-40,0.00164966,0.998353	0/0:21:0.99878:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.606:326.675,113.385:0.0,0.0:1.23e-43,0.000718745,0.999286
+chr1	7691107	.	CATCATCATCAT	.	.	.	END=7691118;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:4,4:4-4,4-4:43,16,0,2:4,43:3,2:325.445:366.612,131.36:0.0,0.0:0.0,4.72132e-13,1.0	0/0:56:1.0:4,4:4-4,4-4:35,17,0,4:4,35:3,4:322.898:326.675,113.385:0.0,0.0:0.0,7.26367e-11,1.0
+chr1	7694774	.	GTTGTTGTTGTTGTTGTT	.	.	.	END=7694791;RU=gtt;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999814:6,6:5-6,5-6:16,16,0,0:6,16:NULL:210.71:366.612,131.36:0.35561,0.35561:1.7937e-41,0.000124117,0.999879	0/0:22:0.9979:6,6:6-6,6-6:12,8,0,2:6,12:4,1|5,1:136.005:326.675,113.385:0.0,0.0:5.14711e-31,0.00100407,0.998998
+chr1	7694925	.	AAAAACAAAAAACAAAAAACA	.	.	.	END=7694945;RU=aaaaaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994642:3,3:3-3,3-3:11,14,0,0:3,11:NULL:172.931:366.612,131.36:0.0,0.0:6.27708e-36,0.0041541,0.995855	0/0:24:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:116.335:326.675,113.385:0.0,0.0:0.0,3.64749e-06,1.0
+chr1	7695814	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7695835;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999993:11,11:6-11,6-11:29,16,0,7:10,3|11,26:6,2|8,2|9,2|11,1:338.434:366.612,131.36:1.08686,1.08686:6e-44,9.69241e-06,0.999993	0/1:28:0.293335:11,15:11-11,11-15:16,6,0,5:11,16:7,1|10,3|15,1:170.999:326.675,113.385:0.0,1.9624:1.21793e-27,7.70312e-08,1.0
+chr1	7695943	.	ATTTATTTATTTATTT	ATTT	.	.	END=7695958;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.100699:1,1:1-3,1-3:0,24,0,0:NULL:NULL:233.385:366.612,131.36:0.681228,0.681228:0.674214,0.300808,0.0250224	0/0:28:0.999907:4,4:4-4,4-4:17,11,0,0:4,17:NULL:160.39:326.675,113.385:0.0,0.0:1.4e-44,5.94761e-05,0.999941
+chr1	7696936	.	AAGGAAGGAAGG	.	.	.	END=7696947;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.9998:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.238:366.612,131.36:0.0,0.0:0.0,9.38424e-05,0.999909	0/0:49:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:311.19:326.675,113.385:0.0,0.0:0.0,4.7513e-08,1.0
+chr1	7708555	.	TATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATA	.	.	END=7708594;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.727258:13,13:5-13,5-13:7,6,0,0:13,7:NULL:87.3032:366.612,131.36:3.78047,3.78047:1.0,0.0,0.0	0/0:4:0.210509:20,20:19-20,19-20:2,2,0,0:20,2:NULL:27.8346:326.675,113.385:0.284901,0.284901:0.0129125,0.424261,0.562949
+chr1	7714389	.	TTTATTTATTTA	.	.	.	END=7714400;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999999:3,3:3-3,3-3:18,15,0,2:3,18:2,2:224.081:366.612,131.36:0.0,0.0:0.0,1.10948e-05,0.999993	0/0:21:0.998997:3,3:3-3,3-3:13,6,0,2:3,13:2,2:118.63:326.675,113.385:0.0,0.0:5.2e-44,0.000355482,0.999645
+chr1	7716510	.	TTCTTCTTCTTC	.	.	.	END=7716521;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:31,21,0,0:4,31:NULL:313.248:366.612,131.36:0.0,0.0:0.0,3.48626e-09,1.0	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:219.121:326.675,113.385:0.0,0.0:0.0,4.9399e-07,1.0
+chr1	7722901	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7722920;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.809748:4,4:4-4,4-4:4,18,0,3:4,4:3,3:206.834:366.612,131.36:0.0,0.0:5.48788e-15,0.0990296,0.90107	0/0:15:0.993087:4,4:4-4,4-4:11,4,0,0:4,11:NULL:82.8366:326.675,113.385:0.0,0.0:1.07704e-37,0.00430158,0.995711
+chr1	7726872	.	GCATGCATGCAT	.	.	.	END=7726883;RU=gcat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:242.362:366.612,131.36:0.0,0.0:0.0,6.85042e-08,1.0	0/0:38:1.0:3,3:3-3,3-3:25,8,0,5:3,25:2,5:204.689:326.675,113.385:0.0,0.0:0.0,6.51567e-08,1.0
+chr1	7730158	.	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC,TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC,TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	.	.	END=7730267;RU=ttccc;PERIOD=5;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.235495:18,20:18-18,19-23:6,5,0,13:18,6:4,1|5,1|6,2|7,1|8,2|13,1|14,1|17,1|19,1|20,2:177.152:366.612,131.36:0.557277,1.07269:0.399266,0.600796,5.83373e-27	3/3:37:0.0548084:21,21:8-23,8-23:0,12,0,22:NULL:3,1|4,2|5,1|8,1|9,1|10,1|11,2|13,1|14,2|16,3|18,1|19,2|20,4:268.821:326.675,113.385:5.02335,5.02335:0.261242,0.509873,0.228898
+chr1	7730913	.	TTATTTATTTAT	.	.	.	END=7730924;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,14,0,0:3,20:NULL:204.163:366.612,131.36:0.0,0.0:0.0,2.67187e-06,1.0	0/0:31:0.999976:3,3:3-3,3-3:17,12,0,2:3,17:2,2:191.298:326.675,113.385:0.0,0.0:0.0,1.77926e-05,0.999986
+chr1	7730966	.	TTAATTAATTAA	.	.	.	END=7730977;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:151.309:366.612,131.36:0.0,0.0:0.0,6.24065e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:181.216:326.675,113.385:0.0,0.0:0.0,4.03032e-06,0.999995
+chr1	7731592	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7731635;RU=tc;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:49:0.326748:25,28:25-25,24-30:10,25,0,14:24,3|25,7:4,1|5,1|9,1|13,1|15,1|16,1|17,1|18,1|19,1|21,1|22,2|27,1|28,1:400.056:366.612,131.36:0.0990099,1.45096:0.0,3.79329e-14,1.0	0/1:40:0.564427:22,24:21-22,21-24:10,17,0,12:21,4|22,6:9,1|11,3|13,1|18,1|19,1|21,3|22,1|24,1:316.193:326.675,113.385:0.298675,1.12871:1.40782e-18,0.000296911,0.999705
+chr1	7731916	.	TGTATGTATGTA	.	.	.	END=7731927;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:19,18,0,4:3,19:2,4:275.074:366.612,131.36:0.0,0.0:0.0,7.01978e-06,0.999994	0/0:22:0.999697:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.413:326.675,113.385:0.0,0.0:0.0,0.00016162,0.999841
+chr1	7731957	.	TGTATGTATGTA	.	.	.	END=7731968;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:245.533:366.612,131.36:0.0,0.0:0.0,3.28198e-07,1.0	0/0:26:0.999966:3,3:3-3,3-3:18,6,0,2:3,18:2,2:143.569:326.675,113.385:0.0,0.0:0.0,1.6661e-05,0.999986
+chr1	7732202	.	GGTTGGGTTGGGTTG	.	.	.	END=7732216;RU=ggttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:287.468:366.612,131.36:0.0,0.0:0.0,2.66084e-07,1.0	0/0:26:0.999927:3,3:3-3,3-3:17,9,0,0:3,17:NULL:154.298:326.675,113.385:0.0,0.0:0.0,5.22394e-05,0.999949
+chr1	7736177	.	CACACACACACACA	.	.	.	END=7736190;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999598:7,7:4-7,4-7:15,16,0,4:7,15:5,1|6,3:242.359:366.612,131.36:1.29472,1.29472:1.71162e-36,0.000150262,0.99985	0/0:31:0.977661:7,7:6-7,6-7:21,6,0,4:6,2|7,19:5,1|6,3:179.53:326.675,113.385:0.412766,0.412766:7.098e-42,0.0223881,0.977653
+chr1	7741556	.	CTCTCTCTCTCT	.	.	.	END=7741567;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999959:6,6:6-6,6-6:18,3,0,0:6,18:NULL:99.8163:366.612,131.36:0.0,0.0:0.0,2.33026e-05,0.999979	0/0:39:1.0:6,6:6-6,6-6:23,16,0,0:6,23:NULL:239.065:326.675,113.385:0.0,0.0:0.0,9.61291e-07,1.0
+chr1	7742062	.	GTGGTGGTGGTGGTGGTGGTGGTGGTG	GTGGTGGTGGTGGTG	.	.	END=7742088;RU=gtg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:65:0.80763:5,9:5-9,9-9:21,39,0,5:5,2|9,19:5,2|7,1|8,1|9,1:493.627:366.612,131.36:1.99912,0.0:0.0,0.80792,0.192135	0/0:62:0.919382:9,9:5-9,5-9:26,32,0,4:5,2|8,2|9,22:6,1|8,3:453.025:326.675,113.385:1.77932,1.77932:0.0,0.0807176,0.919377
+chr1	7750668	.	AGGAGGAGGAGGAGGAGG	.	.	.	END=7750685;RU=agg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999891:6,6:6-6,6-6:16,19,0,3:6,16:4,2|5,1:262.318:366.612,131.36:0.0,0.0:1e-44,6.22465e-05,0.99994	0/0:53:1.0:6,6:6-6,6-6:31,16,0,5:6,31:3,2|5,3:309.142:326.675,113.385:0.0,0.0:0.0,1.43422e-09,1.0
+chr1	7751603	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=7751648;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.924204:20,20:19-20,19-20:11,13,0,15:19,2|20,9:5,2|7,1|8,1|10,1|11,1|12,2|15,2|18,3|19,2:286.55:366.612,131.36:0.284901,0.284901:0.999339,0.000667048,6.53359e-23	0/0:53:0.902676:23,23:23-24,23-24:8,19,0,25:23,8:5,1|7,2|8,2|9,1|10,2|11,2|12,2|13,1|14,1|16,1|17,1|18,2|19,1|20,2|21,3|22,1:408.968:326.675,113.385:0.398507,0.398507:7.15271e-09,0.0285055,0.971546
+chr1	7753197	.	CATACATACATACATACATACATACATACATACATA	CATACATACATACATACATACATACATACATACATACATA	.	.	END=7753232;RU=cata;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999229:10,10:10-10,10-10:13,21,0,15:10,13:4,3|5,3|7,2|8,4|9,3:359.982:366.612,131.36:0.0,0.0:0.0,3.85728e-05,0.999963	0/0:48:1.0:9,9:9-9,9-9:19,13,0,15:9,19:3,1|4,3|5,5|6,2|7,1|8,3:306.119:326.675,113.385:0.0,0.0:3.61896e-38,5.86017e-06,0.999995
+chr1	7754174	.	TTGTCCCTTGTCCCTTGTCCC	.	.	.	END=7754194;RU=ttgtccc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.998875:3,3:3-3,3-3:13,10,0,0:3,13:NULL:141.821:366.612,131.36:0.0,0.0:7.13e-43,0.000787695,0.999217	0/0:30:1.00001:3,3:3-3,3-3:21,7,0,2:3,21:2,2:165.233:326.675,113.385:0.0,0.0:0.0,1.73527e-06,1.0
+chr1	7756374	.	GTGGGTGGGTGG	.	.	.	END=7756385;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,10,0,3:3,28:2,3:226.375:366.612,131.36:0.0,0.0:0.0,6.78654e-09,1.0	0/0:58:1.00001:3,3:3-3,3-3:21,35,0,2:3,21:2,2:419.101:326.675,113.385:0.0,0.0:0.0,2.44914e-06,1.0
+chr1	7757086	.	TAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTA	TAGTATAGTATAGTATAGTATAGTATAGTA	.	.	END=7757130;RU=tagta;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.0:6,6:6-6,6-6:29,11,0,5:6,29:2,2|4,1|5,2:253.025:366.612,131.36:0.0,0.0:1.0,3.5764e-09,0.0	0/0:38:0.999994:9,9:6-9,6-9:19,12,0,6:9,19:2,2|3,1|6,1|7,1|8,1:237.37:326.675,113.385:0.810189,0.810189:3e-45,1.63925e-05,0.999986
+chr1	7769821	.	TAAATAAATAAA	.	.	.	END=7769832;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:268.979:366.612,131.36:0.0,0.0:0.0,4.49312e-08,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:151.86:326.675,113.385:0.0,0.0:0.0,2.38585e-06,1.0
+chr1	7771289	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=7771316;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.0:6,6:6-6,6-6:20,14,0,3:6,20:2,1|4,2:235.568:366.612,131.36:0.0,0.0:1.0,2.87929e-06,5.2e-44	0/0:21:0.997637:7,7:7-7,7-7:12,7,0,2:7,12:2,1|6,1:126.413:326.675,113.385:0.0,0.0:1.45808e-39,0.0012583,0.998747
+chr1	7771869	.	TCTTTCTTTCTTTCTTTCTT	.	.	.	END=7771888;RU=tctt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999699:5,5:5-5,5-5:14,16,0,4:5,14:2,1|4,3:230.877:366.612,131.36:0.0,0.0:1.21585e-40,0.000162183,0.999841	0/0:23:0.999415:5,5:5-5,5-5:14,6,0,3:5,14:2,1|3,1|4,1:137.823:326.675,113.385:0.0,0.0:4.70182e-40,0.000351915,0.999651
+chr1	7774572	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7774631;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:1.0:10,12:10-10,12-12:12,8,0,2:10,6|12,6:6,1|11,1:147.747:366.612,131.36:0.19802,0.0:1.0,5.84118e-14,1.27227e-40	0/0:28:0.909649:15,15:14-15,14-15:6,12,0,9:15,6:4,2|6,1|8,1|12,1|13,1|14,3:205.97:326.675,113.385:0.469019,0.469019:1.82433e-14,0.0521929,0.947889
+chr1	7774898	.	GAGAAGAGAAGAGAAGAGAAGAGAAGAGAA	GAGAA	.	.	END=7774927;RU=gagaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.0866575:1,1:1-3,1-3:0,30,0,0:NULL:NULL:265.586:366.612,131.36:0.628849,0.628849:0.821411,0.173243,0.00542432	0/0:24:0.404266:6,6:3-6,3-6:3,18,0,3:6,3:3,1|5,2:195.218:326.675,113.385:1.06683,1.06683:4.95948e-08,0.451993,0.54812
+chr1	7778042	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7778123;RU=ga;PERIOD=2;REF=41.0;EXPTHRESH=41	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.0487611:20,20:18-21,18-21:0,17,0,10:NULL:5,1|6,1|8,2|9,2|14,2|19,1|20,1:233.463:366.612,131.36:0.774179,0.774179:1.0,0.0,0.0	1/2:32:0.0276154:20,52:14-52,31-53:0,16,0,16:NULL:4,1|7,1|10,1|12,3|15,1|18,2|20,1|28,2|39,1|45,2|52,1:284.165:326.675,113.385:12.7726,4.55678:9.26909e-22,0.769413,0.230618
+chr1	7779108	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=7779135;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.998802:10,10:10-10,10-10:14,12,0,8:10,14:4,1|5,2|6,2|8,3:230.951:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:22:0.993219:14,14:14-15,14-15:11,5,0,5:14,11:6,2|8,1|11,1|13,1:133.13:326.675,113.385:0.35561,0.35561:3.71014e-16,0.00236198,0.997647
+chr1	7781851	.	AACAAAACAAAACAA	.	.	.	END=7781865;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:212.897:366.612,131.36:0.0,0.0:0.0,5.38134e-06,0.999995	0/0:38:1.0:3,3:3-3,3-3:25,13,0,0:3,25:NULL:214.334:326.675,113.385:0.0,0.0:0.0,2.10585e-07,1.0
+chr1	7788005	.	ACCCACCCACCC	.	.	.	END=7788016;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999289:3,3:3-3,3-3:14,22,0,0:3,14:NULL:248.527:366.612,131.36:0.0,0.0:2.657e-42,0.00049849,0.999506	0/0:27:0.999849:3,3:3-3,3-3:16,11,0,0:3,16:NULL:167.991:326.675,113.385:0.0,0.0:0.0,0.000115193,0.999887
+chr1	7795035	.	ACCCACCCACCC	.	.	.	END=7795046;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.992668:3,3:3-3,3-3:11,18,0,0:3,11:NULL:205.859:366.612,131.36:0.0,0.0:1.09167e-32,0.00539508,0.994618	0/0:39:0.998387:3,3:3-3,3-3:13,26,0,0:3,13:NULL:287.107:326.675,113.385:0.0,0.0:2.00258e-38,0.00140911,0.998595
+chr1	7798081	.	TATTTTATTTTATTT	TATTT	.	.	END=7798095;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:20:0.496895:1,3:1-3,1-3:2,18,0,0:3,2:NULL:174.067:366.612,131.36:0.999559,0.623055:2.27498e-07,0.624351,0.375705	0/0:27:0.999956:3,3:3-3,3-3:17,10,0,0:3,17:NULL:157.95:326.675,113.385:0.0,0.0:0.0,3.8157e-05,0.999964
+chr1	7799463	.	ATGATGATGATG	.	.	.	END=7799474;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:27,22,0,2:4,27:3,2:322.329:366.612,131.36:0.0,0.0:0.0,4.87752e-08,1.0	0/0:38:1.0:4,4:4-4,4-4:30,8,0,0:4,30:NULL:188.498:326.675,113.385:0.0,0.0:0.0,6.34163e-09,1.0
+chr1	7801805	.	GTGGGTGGGTGG	.	.	.	END=7801816;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:223.028:366.612,131.36:0.0,0.0:0.0,1.55783e-06,1.0	0/0:37:0.999994:3,3:3-3,3-3:19,16,0,2:3,19:2,2:233.35:326.675,113.385:0.0,0.0:0.0,1.24675e-05,0.999987
+chr1	7803754	.	ACCCACCCACCC	.	.	.	END=7803765;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999118:3,3:3-3,3-3:14,17,0,0:3,14:NULL:212.631:366.612,131.36:0.0,0.0:1.415e-42,0.000604116,0.9994	0/0:34:0.96189:3,3:3-3,3-3:8,26,0,0:3,8:NULL:262.362:326.675,113.385:0.0,0.0:5.20764e-25,0.0283073,0.971747
+chr1	7815175	.	TTGTTGTTGTTG	.	.	.	END=7815186;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:190.375:366.612,131.36:0.0,0.0:0.0,1.82115e-07,1.0	0/0:27:0.99998:4,4:4-5,4-5:18,6,0,2:4,18:3,2:140.519:326.675,113.385:0.284901,0.284901:2.1276e-41,1.56478e-05,0.999986
+chr1	7815188	.	TAGTAGTAGTAGTAGTAGTAG	.	.	.	END=7815208;RU=tag;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:7,7:7-7,7-7:21,12,0,5:7,21:5,1|6,4:233.821:366.612,131.36:0.0,0.0:0.0,1.60282e-06,1.0	0/0:25:0.999849:7,7:7-7,7-7:16,6,0,3:7,16:4,1|6,2:141.732:326.675,113.385:0.0,0.0:2.43164e-35,5.96846e-05,0.999941
+chr1	7817458	.	TTAATTAATTAA	.	.	.	END=7817469;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.983662:3,3:3-3,3-3:10,16,0,0:3,10:NULL:185.333:366.612,131.36:0.0,0.0:8.74342e-33,0.0118355,0.988189	0/0:14:0.929308:3,3:3-3,3-3:7,7,0,0:3,7:NULL:89.6001:326.675,113.385:0.0,0.0:1.61186e-23,0.0389226,0.961144
+chr1	7819272	.	ACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7819295;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.31213:18,25:18-18,18-28:8,12,0,13:18,8:5,2|8,1|9,1|12,2|16,2|17,3|24,1|25,1:256.603:366.612,131.36:0.0,2.54892:0.0,0.0,1.0	0/0:29:0.987278:12,12:11-12,11-12:14,11,0,4:11,2|12,12:8,2|9,1|10,1:196.047:326.675,113.385:0.236383,0.236383:1.05692e-17,0.0116967,0.98833
+chr1	7819739	.	ACCTGGGACGAGAAAACCTGGGACGAGAAAACCTGGGACGAGAAA	ACCTGGGACGAGAAAACCTGGGACGAGAAA	.	.	END=7819783;RU=acctgggacgagaaa;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.993555:2,2:2-2,2-2:11,14,0,0:2,11:NULL:183.204:366.612,131.36:0.0,0.0:0.99902,0.000983438,1.21058e-16	0/0:16:0.993527:3,3:3-3,3-3:11,5,0,0:3,11:NULL:95.4833:326.675,113.385:0.0,0.0:5.11705e-14,0.0047793,0.995235
+chr1	7820296	.	AAAAGAAAAGAAAAG	.	.	.	END=7820310;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.973171:3,3:3-3,3-3:9,11,0,0:3,9:NULL:136.448:366.612,131.36:0.19802,0.19802:7.20979e-29,0.0185596,0.981481	0/0:23:0.999993:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.7:326.675,113.385:0.0,0.0:0.0,1.19035e-05,0.999987
+chr1	7821542	.	TTTGTTTGTTTG	.	.	.	END=7821553;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.874:366.612,131.36:0.0,0.0:0.0,4.49495e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:21,12,0,0:3,21:NULL:185.675:326.675,113.385:0.0,0.0:0.0,4.07183e-06,0.999995
+chr1	7823455	.	TTTATTTATTTA	.	.	.	END=7823466;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:156.071:366.612,131.36:0.0,0.0:0.0,1.02177e-05,0.999993	0/0:23:0.999854:3,3:3-3,3-3:16,7,0,0:3,16:NULL:122.28:326.675,113.385:0.0,0.0:0.0,7.10557e-05,0.999932
+chr1	7838440	.	CTGCTGCTGCTG	.	.	.	END=7838451;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:19,9,0,3:4,19:3,3:182.054:366.612,131.36:0.0,0.0:0.0,7.13775e-06,0.999994	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:224.091:326.675,113.385:0.0,0.0:0.0,8.09682e-06,0.999994
+chr1	7840652	.	ACCCACCCACCC	.	.	.	END=7840663;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:5:0.633775:3,3:3-3,3-3:4,1,0,0:3,4:NULL:24.55:366.612,131.36:0.0,0.0:1.78363e-11,0.150741,0.849338	0/0:23:0.990279:3,3:3-3,3-3:10,13,0,0:3,10:NULL:152.789:326.675,113.385:0.0,0.0:1.10363e-26,0.00576428,0.994249
+chr1	7849736	.	GGGTGGGTGGGT	GGGT	.	.	END=7849747;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0580046:1,1:1-3,1-3:0,9,0,0:NULL:NULL:83.0494:366.612,131.36:1.03018,1.03018:0.182364,0.502118,0.315633	0/0:27:0.993975:3,3:3-3,3-3:10,15,0,2:3,10:2,2:188.748:326.675,113.385:0.0,0.0:1.60427e-28,0.00273042,0.997276
+chr1	7851717	.	ATTTTTTTATTTTTTTATTTTTTT	.	.	.	END=7851740;RU=attttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.995889:3,3:3-3,3-3:11,6,0,0:3,11:NULL:101.894:366.612,131.36:0.0,0.0:7.14769e-35,0.00241098,0.997595	0/0:15:0.943631:3,3:3-3,3-3:7,6,0,2:3,7:2,2:99.6613:326.675,113.385:0.0,0.0:2.55924e-22,0.0283061,0.971747
+chr1	7857369	.	TTTAATTTAATTTAATTTAATTTAA	TTTAATTTAATTTAATTTAATTTAATTTAA	.	.	END=7857393;RU=tttaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.981201:6,6:4-6,4-6:10,3,0,0:6,10:NULL:69.5344:366.612,131.36:0.985733,0.985733:4.18017e-39,0.0116041,0.98842	0/0:26:0.999993:5,5:5-5,5-5:19,7,0,0:5,19:NULL:141.068:326.675,113.385:0.0,0.0:0.0,1.77228e-05,0.999986
+chr1	7861967	.	TTTGTTTTGTTTTGT	.	.	.	END=7861981;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:26,24,0,2:3,26:2,2:334.791:366.612,131.36:0.0,0.0:0.0,1.30562e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:26,5,0,4:3,26:2,4:173.888:326.675,113.385:0.0,0.0:0.0,3.36513e-08,1.0
+chr1	7863803	.	TAAGATTAAGATTAAGAT	.	.	.	END=7863820;RU=taagat;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999948:3,3:3-3,3-3:17,21,0,0:3,17:NULL:268.794:366.612,131.36:0.0,0.0:0.0,5.8172e-05,0.999942	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.778:326.675,113.385:0.0,0.0:0.0,8.92912e-07,1.0
+chr1	7867431	.	AAACAAACAAACAAAC	.	.	.	END=7867446;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:34,12,0,0:4,34:NULL:255.579:366.612,131.36:0.0990099,0.0990099:0.0,5.22199e-10,1.0	0/0:44:1.0:4,4:4-4,4-4:25,16,0,3:4,25:2,2|3,1:271.543:326.675,113.385:0.0,0.0:0.0,1.07199e-07,1.0
+chr1	7871205	.	ATTTATTTATTTATTTATTT	.	.	.	END=7871224;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:5,5:5-5,5-5:27,16,0,5:5,27:2,2|3,2|4,1:299.309:366.612,131.36:0.0,0.0:0.0,1.8124e-08,1.0	0/0:37:0.999962:5,5:5-5,5-5:17,13,0,7:5,17:3,4|4,3:240.395:326.675,113.385:0.0,0.0:0.0,3.07993e-05,0.999971
+chr1	7879267	.	AAGAAAGAAAGA	.	.	.	END=7879278;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.5:366.612,131.36:0.0,0.0:0.0,1.94776e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:26,7,0,3:3,26:2,3:185.156:326.675,113.385:0.0,0.0:0.0,3.62187e-08,1.0
+chr1	7881454	.	GACAGACAGACA	.	.	.	END=7881465;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995138:3,3:3-3,3-3:11,19,0,0:3,11:NULL:223.799:366.612,131.36:0.0,0.0:3.50654e-37,0.00251302,0.997495	0/0:51:1.0:3,3:3-3,3-3:29,18,0,4:3,29:2,4:308.153:326.675,113.385:0.0,0.0:0.0,5.51923e-09,1.0
+chr1	7883786	.	ATTTATTTATTTATTTATTTATTT	ATTT	.	.	END=7883809;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:31:0.999929:6,6:6-6,6-6:17,10,0,4:6,17:3,1|4,1|5,1|6,1:191.156:326.675,113.385:0.0,0.0:0.0,2.64831e-05,0.999978
+chr1	7887170	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=7887201;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:43:0.988754:8,8:6-8,6-8:26,13,0,4:6,2|8,24:4,1|6,2|7,1:278.17:326.675,113.385:0.904844,0.904844:0.0,0.0112725,0.988754
+chr1	7888946	.	GACAGACAGACA	.	.	.	END=7888957;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.615416:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6225:366.612,131.36:0.0,0.0:8.99095e-14,0.154049,0.84603	0/0:39:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:210.054:326.675,113.385:0.0,0.0:0.0,1.55212e-08,1.0
+chr1	7891093	.	ATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATAT	.	.	END=7891130;RU=at;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0554638:18,18:17-20,17-20:0,15,0,2:NULL:12,2:149.827:366.612,131.36:1.15947,1.15947:0.220319,0.514231,0.265508	0/0:12:0.647398:19,19:18-22,18-22:6,4,0,0:19,6:NULL:62.7653:326.675,113.385:1.28538,1.28538:2.63552e-05,0.140772,0.859295
+chr1	7891383	.	TGTTTTGTTTTGTTT	.	.	.	END=7891397;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:243.922:366.612,131.36:0.0,0.0:0.0,1.33914e-07,1.0	0/0:25:0.999915:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.421:326.675,113.385:0.0,0.0:0.0,5.49623e-05,0.999948
+chr1	7892968	.	AATAATAATAAT	.	.	.	END=7892979;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:201.513:366.612,131.36:0.0,0.0:0.0,4.54687e-06,0.999995	0/0:33:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:180.598:326.675,113.385:0.0,0.0:0.0,7.9396e-07,1.0
+chr1	7895098	.	TTTTGTTTTGTTTTG	.	.	.	END=7895112;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.395108:3,3:1-3,1-3:3,22,0,0:3,3:NULL:218.472:366.612,131.36:0.734944,0.734944:2.0804e-10,0.469974,0.530126	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:242.509:326.675,113.385:0.0,0.0:0.0,1.08537e-07,1.0
+chr1	7898220	.	ATAGATAGATAG	.	.	.	END=7898231;RU=atag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,12,0,3:3,23:2,3:218.714:366.612,131.36:0.0,0.0:0.0,2.8081e-07,1.0	0/0:42:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:272.183:326.675,113.385:0.0,0.0:0.0,1.8962e-06,1.0
+chr1	7902277	.	CTCTCTTGCTCTCTTGCTCTCTTGCTCTCTTG	.	.	.	END=7902308;RU=ctctcttg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999986:4,4:4-4,4-4:18,24,0,6:4,18:2,1|3,5:336.429:366.612,131.36:0.0,0.0:0.0,2.38834e-05,0.999979	0/0:40:0.999988:4,4:4-4,4-4:19,18,0,3:4,19:3,3:267.977:326.675,113.385:0.0,0.0:0.0,2.09661e-05,0.999979
+chr1	7902333	.	CTCTCCTCTCCTCTC	.	.	.	END=7902347;RU=ctctc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999995:3,3:3-3,3-3:19,17,0,0:3,19:NULL:233.639:366.612,131.36:0.0,0.0:0.0,1.28276e-05,0.999987	0/0:37:1.0:3,3:3-3,3-3:22,13,0,2:3,22:2,2:226.959:326.675,113.385:0.0,0.0:0.0,1.32696e-06,1.0
+chr1	7902723	.	CACCCCACCCCACCCCACCC	.	.	.	END=7902742;RU=caccc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999145:4,4:4-4,4-4:13,15,0,3:4,13:3,2|4,1:210.981:366.612,131.36:0.0,0.0:0.0,0.000394074,0.999607	0/0:33:0.999912:4,4:4-4,4-4:16,14,0,3:4,16:3,3:212.011:326.675,113.385:0.0,0.0:0.0,5.59225e-05,0.999947
+chr1	7904296	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7904335;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99201:9,9:8-9,8-9:15,10,0,7:8,2|9,13:4,2|5,1|6,2|7,2:215.141:366.612,131.36:0.169767,0.169767:1.0,0.0,0.0	0/2:33:0.704436:20,21:19-20,18-21:9,7,0,16:19,2|20,5|21,2:5,3|6,2|12,2|13,1|15,1|16,2|17,2|18,1|19,2:238.51:326.675,113.385:0.469854,0.98424:1.38315e-07,0.101529,0.898575
+chr1	7906023	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7906042;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999855:5,5:5-5,5-5:16,12,0,3:5,16:3,2|4,1:194.783:366.612,131.36:0.0,0.0:0.0,6.73828e-05,0.999933	0/0:37:1.0:5,5:5-5,5-5:24,6,0,7:5,24:2,1|3,4|4,2:198.611:326.675,113.385:0.0,0.0:0.0,1.73549e-07,1.0
+chr1	7909399	.	TCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7909410;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:38:0.316243:3,14:3-3,14-16:15,17,0,6:3,15:2,2|14,4:267.265:366.612,131.36:0.0,1.27219:0.0,2.12252e-29,1.0	0/1:16:0.290253:3,14:3-3,3-15:5,9,0,2:3,5:13,1|14,1:119.213:326.675,113.385:0.0,4.03871:2.8659e-27,6.00102e-14,1.0
+chr1	7915045	.	GTGTGTGTGTGT	GTGTGTGTGTGTGT	.	.	END=7915056;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999418:7,7:6-10,6-10:14,23,0,3:7,14:5,1|6,1|7,1:282.392:366.612,131.36:1.3654,1.3654:0.0,8.56386e-05,0.999917	0/0:29:0.965444:6,6:6-8,6-8:9,18,0,0:6,9:NULL:198.063:326.675,113.385:0.856192,0.856192:9.95762e-17,0.0222382,0.977805
+chr1	7926986	.	CAAAACAAAACAAAACAAAACAAAACAAAA	CAAAA	.	.	END=7927015;RU=caaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:56:1.0:6,6:6-6,6-6:27,24,0,5:6,27:2,1|3,2|4,1|5,1:368.58:326.675,113.385:0.0,0.0:0.0,5.05438e-08,1.0
+chr1	7937066	.	ACACACACACACAC	.	.	.	END=7937079;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:22:0.999137:7,7:7-8,7-8:14,5,0,2:7,14:5,2:116.11:326.675,113.385:0.253975,0.253975:5.97146e-25,0.000346904,0.999658
+chr1	7937514	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT	.	.	END=7937567;RU=gt;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:0.848815:27,27:25-27,25-27:7,9,0,12:27,7:4,1|11,1|12,1|13,1|16,2|17,1|19,1|20,1|21,1|23,2:208.109:326.675,113.385:0.669764,0.669764:4.12169e-09,0.0626275,0.937463
+chr1	7939725	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC	.	.	END=7939776;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:46:0.598119:26,26:23-26,23-26:4,21,0,20:26,4:5,1|6,3|7,1|8,1|9,3|11,1|15,1|16,1|18,1|19,1|20,2|21,1|25,2|26,1:369.806:326.675,113.385:1.00893,1.00893:6.09719e-14,0.206923,0.793123
+chr1	7939777	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7939814;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/2:31:0.342097:19,26:19-19,18-27:15,13,0,3:18,2|19,13:18,1|21,1|26,1:228.743:326.675,113.385:0.0,3.06477:5.61739e-33,5.98841e-12,1.0
+chr1	7967867	.	AAACAAACAAACAAACAAAC	.	.	.	END=7967886;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:5,5:5-5,5-5:23,16,0,2:5,23:3,1|4,1:254.919:366.612,131.36:0.0,0.0:0.0,7.37833e-07,1.0	0/0:28:0.997946:5,5:5-5,5-5:12,11,0,5:5,12:2,1|3,1|4,3:180.598:326.675,113.385:0.0,0.0:1.398e-42,0.000923213,0.999081
+chr1	7968753	.	AAGCAAGCAAGC	.	.	.	END=7968764;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999979:3,3:3-3,3-3:18,7,0,0:3,18:NULL:132.608:366.612,131.36:0.0,0.0:0.0,1.75045e-05,0.999986	0/0:15:0.96209:3,3:3-3,3-3:8,7,0,0:3,8:NULL:94.2688:326.675,113.385:0.0,0.0:3.25334e-27,0.0200543,0.979987
+chr1	7969719	.	AAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAAT	.	.	END=7969738;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.999939:6,6:6-6,6-6:17,9,0,3:6,17:3,1|5,2:167.937:366.612,131.36:0.0,0.0:0.0,9.13269e-06,0.999993	0/0:13:0.977978:5,5:5-5,5-5:9,4,0,0:5,9:NULL:72.6275:326.675,113.385:0.0,0.0:3.47392e-30,0.0125675,0.987461
+chr1	7986821	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7986852;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:9,9:9-9,9-9:19,13,0,9:9,19:3,2|5,1|6,3|8,3:265.268:366.612,131.36:0.0,0.0:0.0,1.16032e-06,1.0	0/0:43:0.999515:8,8:8-8,8-8:14,14,0,15:8,14:3,2|4,1|5,5|6,4|7,3:291.605:326.675,113.385:0.0,0.0:2.75757e-38,0.000194398,0.99981
+chr1	8003962	.	TTGTTTGTTTGT	.	.	.	END=8003973;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999578:3,3:3-3,3-3:15,10,0,0:3,15:NULL:156.054:366.612,131.36:0.0,0.0:0.0,0.000284195,0.999719	0/0:16:0.883694:3,3:3-3,3-3:6,10,0,0:3,6:NULL:118.129:326.675,113.385:0.0,0.0:9.06063e-21,0.0639908,0.936099
+chr1	8004898	.	AAGGAAGGAAGG	.	.	.	END=8004909;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:23,25,0,2:3,23:2,2:337.579:366.612,131.36:0.0,0.0:0.0,7.4372e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:213.394:326.675,113.385:0.0,0.0:0.0,8.8998e-06,0.999994
+chr1	8005269	.	TTTATTTATTTA	.	.	.	END=8005280;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:24,30,0,5:3,24:2,5:403.316:366.612,131.36:0.0,0.0:0.0,1.95327e-07,1.0	0/0:36:0.999995:3,3:3-3,3-3:20,16,0,0:3,20:NULL:233.918:326.675,113.385:0.0,0.0:0.0,1.32684e-05,0.999987
+chr1	8005894	.	GTGTGTGTGTGTGT	.	.	.	END=8005907;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.993775:7,7:7-7,7-7:11,10,0,3:7,11:5,1|6,2:160.454:366.612,131.36:0.0,0.0:1.51517e-20,0.00212715,0.997881	0/0:32:0.99969:7,7:7-8,7-8:15,12,0,4:7,15:4,1|6,3:200.321:326.675,113.385:0.270063,0.270063:6.405e-28,0.000103737,0.999896
+chr1	8015093	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG,GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	END=8015152;RU=ggag;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.246659:9,15:9-16,12-16:2,24,0,3:15,2:9,2|14,1:252.076:366.612,131.36:2.22065,1.22596:0.000347671,0.806366,0.193342	2/2:9:0.0494967:12,12:8-12,8-12:0,3,0,6:NULL:3,1|6,1|8,1|11,1|12,2:70.3561:326.675,113.385:1.30046,1.30046:0.676946,0.294354,0.028742
+chr1	8015152	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=8015183;RU=ggaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.993505:8,8:8-10,8-10:12,25,0,0:8,12:NULL:283.844:366.612,131.36:0.817177,0.817177:1.32354e-28,0.00572351,0.994293	0/0:22:0.999814:8,8:8-10,8-10:16,2,0,3:8,16:3,1|7,2:105.387:326.675,113.385:0.797014,0.797014:1.31413e-38,5.16073e-05,0.999949
+chr1	8015590	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8015635;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:17:0.78673:16,17:16-17,16-17:5,7,0,5:16,3|17,2:4,1|6,1|7,1|15,2:131.804:366.612,131.36:0.374147,0.374147:1.0,0.0,0.0	0/3:24:0.654856:23,24:22-23,21-24:11,7,0,5:22,3|23,6|24,2:4,1|5,2|6,1|12,1:164.248:326.675,113.385:0.429525,0.920845:3.63768e-08,0.076716,0.923377
+chr1	8018726	.	CTGCTGCTGCTG	.	.	.	END=8018737;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:255.397:366.612,131.36:0.0,0.0:0.0,6.28587e-07,1.0	0/0:43:1.0:4,4:4-4,4-4:22,21,0,0:4,22:NULL:268.061:326.675,113.385:0.0,0.0:0.0,2.23241e-06,1.0
+chr1	8019993	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8020020;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:0.999518:11,11:10-11,10-11:30,16,0,5:10,4|11,24|12,2:4,1|5,1|7,2|8,1:325.381:366.612,131.36:0.270063,0.270063:1.0,6.34455e-09,0.0	0/0:47:0.999506:14,14:14-15,14-15:26,15,0,6:13,3|14,21|15,2:4,1|5,1|7,1|9,1|12,2:312.639:326.675,113.385:0.195027,0.195027:3.34035e-27,0.000366867,0.999636
+chr1	8023350	.	TGATGATGATGA	.	.	.	END=8023361;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:232.112:366.612,131.36:0.0,0.0:0.0,4.19874e-08,1.0	0/0:32:0.999993:4,4:4-4,4-4:19,13,0,0:4,19:NULL:194.258:326.675,113.385:0.0,0.0:0.0,1.44639e-05,0.999986
+chr1	8028124	.	ACACACACACACACAC	.	.	.	END=8028139;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.246956:8,8:8-8,8-8:2,0,0,0:8,2:NULL:7.97734:366.612,131.36:0.0,0.0:6.89451e-05,0.374285,0.625703	0/0:47:1.0:8,8:8-8,8-8:28,12,0,7:8,28:5,2|6,1|7,4:281.72:326.675,113.385:0.0,0.0:0.0,1.34757e-08,1.0
+chr1	8035149	.	GTGTGTGTGTGTGT	.	.	.	END=8035162;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:7,7:7-7,7-7:20,15,0,2:7,20:5,2:233.838:366.612,131.36:0.139319,0.139319:5.08562e-39,5.57218e-06,0.999995	0/0:49:1.0:7,7:7-7,7-7:30,17,0,2:7,30:6,2:300.087:326.675,113.385:0.0,0.0:0.0,8.81438e-09,1.0
+chr1	8039355	.	GTGGGTGGGTGG	.	.	.	END=8039366;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:1.0:3,3:3-3,3-3:40,25,0,0:3,40:NULL:385.189:366.612,131.36:0.0,0.0:0.0,5.97085e-12,1.0	0/0:66:1.0:3,3:3-3,3-3:51,11,0,4:3,51:2,4:327.464:326.675,113.385:0.0,0.0:0.0,1.1277e-15,1.0
+chr1	8039460	.	ATACATACATACATACATACATAC	ATACATACATACATACATAC	.	.	END=8039483;RU=atac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:5,5:5-5,5-5:30,17,0,7:5,30:2,3|3,1|4,3:325.203:366.612,131.36:0.0,0.0:1.0,3.32293e-09,0.0	0/0:51:1.0:6,6:6-6,6-6:28,15,0,8:6,28:2,2|3,2|4,2|5,2:306.503:326.675,113.385:0.0,0.0:0.0,1.9037e-08,1.0
+chr1	8047704	.	TGGTTGGTTGGT	.	.	.	END=8047715;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:355.566:366.612,131.36:0.0,0.0:0.0,2.55212e-08,1.0	0/0:44:1.0:3,3:3-3,3-3:32,12,0,0:3,32:NULL:233.934:326.675,113.385:0.0,0.0:0.0,1.47459e-09,1.0
+chr1	8053368	.	AAATAAATAAAT	.	.	.	END=8053379;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:219.592:366.612,131.36:0.0,0.0:0.0,1.6413e-06,1.0	0/0:20:0.995495:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.957:326.675,113.385:0.0,0.0:2.08069e-37,0.0027254,0.997283
+chr1	8057815	.	TTTATTTATTTA	.	.	.	END=8057826;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999994:3,3:3-3,3-3:19,11,0,0:3,19:NULL:174.251:366.612,131.36:0.0,0.0:0.0,1.34549e-05,0.999987	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:210.317:326.675,113.385:0.0,0.0:0.0,5.71642e-06,0.999995
+chr1	8058525	.	CTACTACTACTA	.	.	.	END=8058536;RU=cta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:24,13,0,0:4,24:NULL:219.275:366.612,131.36:0.0,0.0:0.0,5.10952e-07,1.0	0/0:34:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:202.493:326.675,113.385:0.0,0.0:0.0,6.14543e-06,0.999995
+chr1	8058938	.	TTGGTTGGTTGG	.	.	.	END=8058949;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:33,17,0,2:3,33:2,2:298.514:366.612,131.36:0.0,0.0:0.0,7.62773e-10,1.0	0/0:45:0.999986:3,3:3-3,3-3:19,26,0,0:3,19:NULL:314.665:326.675,113.385:0.0,0.0:0.0,2.32134e-05,0.999979
+chr1	8061760	.	TTTATTTATTTA	.	.	.	END=8061771;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:203.399:366.612,131.36:0.0,0.0:0.0,9.55518e-06,0.999993	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:209.233:326.675,113.385:0.0,0.0:0.0,1.0808e-07,1.0
+chr1	8063311	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8063358;RU=ct;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.366873:24,24:20-29,20-29:7,9,0,2:23,2|24,5:6,1|12,1:140.755:366.612,131.36:3.03436,3.03436:6.45338e-06,0.549389,0.450712	0/1:32:0.942422:24,25:23-24,23-26:13,11,0,6:23,3|24,7|25,3:5,2|10,1|18,2|24,1:231.017:326.675,113.385:0.253975,0.85905:5.17546e-17,0.0127168,0.987312
+chr1	8063359	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA	.	.	END=8063386;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:26:0.975883:14,18:14-19,16-20:10,10,0,3:14,5|18,3|19,2:5,1|6,1|9,1:178.02:366.612,131.36:1.13054,0.860418:2.49471e-18,7.04711e-09,1.0	0/0:33:0.998811:14,14:13-14,13-14:13,12,0,7:14,13:5,1|7,1|10,2|12,2|13,1:226.441:326.675,113.385:0.253975,0.253975:1.41554e-22,0.000607714,0.999394
+chr1	8066722	.	CATGCATGCATG	.	.	.	END=8066733;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:19,9,0,3:3,19:2,3:177.705:366.612,131.36:0.0,0.0:0.0,2.81014e-06,1.0	0/0:22:0.999638:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.182:326.675,113.385:0.0,0.0:0.0,0.000209397,0.999795
+chr1	8068975	.	ATTCATTCATTC	.	.	.	END=8068986;RU=attc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:274.872:366.612,131.36:0.0,0.0:0.0,8.47198e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:146.035:326.675,113.385:0.0,0.0:0.0,2.6369e-07,1.0
+chr1	8075123	.	CTCCCTCCCTCC	.	.	.	END=8075134;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.99998:3,3:3-3,3-3:18,19,0,4:3,18:2,4:270.132:366.612,131.36:0.0,0.0:0.0,1.23562e-05,0.999987	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:248.856:326.675,113.385:0.0,0.0:0.0,1.1653e-07,1.0
+chr1	8083970	.	GTGTGTGTGTGT	.	.	.	END=8083981;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:6,6:6-6,6-6:28,18,0,2:6,28:4,1|5,1:289.967:366.612,131.36:0.139319,0.139319:0.0,2.06437e-08,1.0	0/0:53:1.0:6,6:6-6,6-6:33,20,0,0:6,33:NULL:306.839:326.675,113.385:0.0,0.0:0.0,1.10416e-09,1.0
+chr1	8091175	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8091222;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.957696:25,26:25-26,25-26:7,9,0,7:25,3|26,4:4,1|6,1|7,1|10,1|11,2|22,1:176.37:366.612,131.36:0.40582,0.236383:1.10855e-12,0.00186889,0.998139	0/0:32:0.641589:24,24:23-24,23-24:13,12,0,7:23,3|24,10:11,1|16,1|17,1|19,3|23,1:225.676:326.675,113.385:0.491073,0.491073:6.05201e-11,0.357067,0.642976
+chr1	8093608	.	AGAAAGAAAGAA	.	.	.	END=8093619;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:188.384:366.612,131.36:0.0,0.0:0.0,4.88905e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:220.726:326.675,113.385:0.0,0.0:0.0,6.07462e-08,1.0
+chr1	8095889	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8095942;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:0.99954:15,15:15-15,15-15:26,23,0,14:14,4|15,22:5,1|8,3|9,1|11,1|12,3|13,3|14,1|15,1:440.902:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/2:69:0.276807:27,36:27-27,9-36:14,20,0,33:26,3|27,9|28,2:5,2|6,1|8,1|9,1|11,3|12,2|13,1|14,1|15,2|16,1|17,1|18,1|19,1|20,1|21,4|22,1|24,1|25,2|26,2|27,1|29,1|30,1|34,1:534.626:326.675,113.385:0.0990099,7.57372:7.14644e-35,2.33556e-10,1.0
+chr1	8098070	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=8098089;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999434:4,4:4-4,4-4:14,27,0,4:4,14:2,1|3,3:319.267:366.612,131.36:0.0,0.0:0.0,0.000306516,0.999697	0/0:31:0.999931:4,4:4-4,4-4:17,12,0,2:4,17:3,2:191.621:326.675,113.385:0.0,0.0:0.0,3.87537e-05,0.999963
+chr1	8099157	.	ATATATATATATATATATATATATATATAT	AT,ATAT	.	.	END=8099186;RU=at;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:8:0.00773839:1,2:1-7,1-7:0,8,0,0:NULL:NULL:69.9445:366.612,131.36:2.05187,2.03604:0.389323,0.503565,0.107215	0/0:14:0.884329:15,15:13-18,13-18:8,2,0,0:15,8:NULL:53.528:326.675,113.385:1.0936,1.0936:4.83461e-07,0.0599293,0.940159
+chr1	8099251	.	TTTGTTTGTTTGTTTG	.	.	.	END=8099266;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:4,4:4-4,4-4:20,7,0,0:4,20:NULL:140.623:366.612,131.36:0.0,0.0:0.0,6.8825e-06,0.999994	0/0:18:0.999251:4,4:4-4,4-4:14,4,0,0:4,14:NULL:88.6924:326.675,113.385:0.0,0.0:1e-45,0.000424862,0.999576
+chr1	8104863	.	AGGAAGGAAGGA	.	.	.	END=8104874;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.99993:3,3:3-3,3-3:17,17,0,2:3,17:2,2:242.556:366.612,131.36:0.0,0.0:0.0,3.98932e-05,0.999963	0/0:52:1.0:3,3:3-3,3-3:23,27,0,2:3,23:2,2:352.532:326.675,113.385:0.0,0.0:0.0,5.92066e-07,1.0
+chr1	8108241	.	TCTTCTTCTTCT	.	.	.	END=8108252;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:32,17,0,0:4,32:NULL:287.673:366.612,131.36:0.0,0.0:0.0,3.52764e-09,1.0	0/0:33:0.999976:4,4:4-4,4-4:19,14,0,0:4,19:NULL:206.848:326.675,113.385:0.0,0.0:0.0,3.39215e-05,0.99997
+chr1	8108409	.	TCTTTCTTTCTT	.	.	.	END=8108420;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:35,21,0,3:3,35:2,3:354.824:366.612,131.36:0.0,0.0:0.0,9.24194e-11,1.0	0/0:46:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:237.13:326.675,113.385:0.0,0.0:0.0,2.04546e-10,1.0
+chr1	8109627	.	ATATATATATATAT	.	.	.	END=8109640;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999854:7,7:7-7,7-7:17,16,0,0:7,17:NULL:222.961:366.612,131.36:0.0,0.0:6.85001e-22,9.72556e-05,0.999903	0/0:30:1.0:7,7:7-7,7-7:20,6,0,2:7,20:4,2:150.079:326.675,113.385:0.0,0.0:7.87813e-26,1.11203e-05,0.999993
+chr1	8111389	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8111422;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:52:0.92424:20,21:20-20,20-21:19,12,0,20:19,3|20,16:5,1|6,2|7,2|8,1|9,3|11,1|12,2|13,2|15,1|16,1|17,2|21,2:374.466:366.612,131.36:0.0,0.298675:0.0,2.51775e-16,1.0	1/0:43:0.771566:13,17:13-17,17-17:15,13,0,15:13,2|16,3|17,10:6,2|8,2|9,2|10,2|11,2|12,3|16,2:324.918:326.675,113.385:1.82038,0.0:4.76351e-10,0.91326,0.0868381
+chr1	8113654	.	TATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=8113685;RU=tatt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.880564:10,10:10-10,10-10:6,11,0,10:10,6:2,1|3,2|5,3|6,2|8,2:199.947:366.612,131.36:0.0,0.0:1.30764e-35,0.0149906,0.985039	0/0:41:0.999572:8,8:7-8,7-8:14,18,0,8:8,14:3,1|4,1|5,2|7,3|8,1:281.979:326.675,113.385:0.345543,0.345543:0.0,0.000167456,0.999834
+chr1	8114127	.	TTGTTTGTTTGT	.	.	.	END=8114138;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:26,17,0,4:3,26:2,4:286.37:366.612,131.36:0.0,0.0:0.0,4.42697e-08,1.0	0/0:30:0.999927:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.804:326.675,113.385:0.0,0.0:0.0,5.3239e-05,0.999948
+chr1	8114704	.	TTAATTAATTAATTAA	.	.	.	END=8114719;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.99981:4,4:4-4,4-4:16,23,0,0:4,16:NULL:277.303:366.612,131.36:0.0,0.0:0.0,0.000160105,0.999842	0/0:26:0.999136:4,4:4-4,4-4:14,12,0,0:4,14:NULL:164.933:326.675,113.385:0.0,0.0:1.562e-42,0.000666524,0.999339
+chr1	8115132	.	AAATAAATAAAT	.	.	.	END=8115143;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999857:3,3:3-3,3-3:17,11,0,0:3,17:NULL:175.865:366.612,131.36:0.0,0.0:0.0,0.000104486,0.999896	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.987:326.675,113.385:0.0,0.0:0.0,2.60132e-07,1.0
+chr1	8115975	.	AGAAAGAAAGAA	.	.	.	END=8115986;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999882:3,3:3-3,3-3:16,14,0,0:3,16:NULL:201.072:366.612,131.36:0.0,0.0:0.0,8.62163e-05,0.999917	0/0:34:1.0:3,3:3-3,3-3:22,12,0,0:3,22:NULL:198.796:326.675,113.385:0.0,0.0:0.0,1.41773e-06,1.0
+chr1	8116438	.	GTTGTTGTTGTTGTT	.	.	.	END=8116452;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999999:5,5:5-5,5-5:18,13,0,3:5,18:4,2|5,1:213.382:366.612,131.36:0.0,0.0:0.0,7.17428e-06,0.999994	0/0:23:0.986297:5,5:5-5,5-5:10,13,0,0:5,10:NULL:158.594:326.675,113.385:0.0,0.0:1.25291e-30,0.00974018,0.990283
+chr1	8119064	.	TTTGTTTGTTTG	.	.	.	END=8119075;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:227.549:366.612,131.36:0.0,0.0:0.0,2.36075e-06,1.0	0/0:39:1.0:3,3:3-3,3-3:29,10,0,0:3,29:NULL:209.031:326.675,113.385:0.0,0.0:0.0,9.50918e-09,1.0
+chr1	8122477	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8122534;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:66:0.963354:19,19:19-20,19-20:18,28,0,19:18,2|19,14|20,2:5,2|7,3|8,1|13,2|14,4|15,1|16,1|17,2|18,3:500.719:366.612,131.36:0.369666,0.369666:1.0,0.0,0.0	0/0:48:0.327823:29,29:27-30,27-30:3,22,0,20:29,3:4,1|5,3|7,2|8,1|10,1|13,1|14,1|15,2|16,1|18,1|19,1|20,3|25,1|27,1:374.998:326.675,113.385:1.16277,1.16277:9.19554e-05,0.424578,0.575422
+chr1	8122771	.	ATCTATCTATCT	.	.	.	END=8122782;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:30,24,0,3:3,30:2,3:360.085:366.612,131.36:0.0,0.0:0.0,4.51023e-09,1.0	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:225.757:326.675,113.385:0.0,0.0:0.0,4.68736e-07,1.0
+chr1	8130079	.	ATCTATCTATCT	.	.	.	END=8130090;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:20,17,0,3:3,20:2,3:256.317:366.612,131.36:0.0,0.0:0.0,2.22684e-06,1.0	0/0:52:1.0:3,3:3-3,3-3:30,20,0,2:3,30:2,2:316.916:326.675,113.385:0.0,0.0:0.0,2.97695e-09,1.0
+chr1	8130171	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8130210;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999032:15,15:15-15,15-15:16,8,0,4:15,16:12,2|13,1|15,1:175.304:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.891619:20,20:18-20,18-20:10,15,0,7:19,2|20,8:6,1|8,1|11,3|12,1|19,1:251.968:326.675,113.385:0.62211,0.62211:3.15234e-10,0.0847739,0.915325
+chr1	8132817	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8132848;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.346622:22,22:20-22,20-22:6,19,0,16:21,2|22,4:4,1|5,1|6,1|7,1|8,3|10,1|11,1|12,2|15,1|17,2|21,2:336.438:366.612,131.36:0.623841,0.623841:0.0,0.0,1.0	0/0:28:0.958789:16,16:15-16,15-16:14,11,0,3:15,3|16,11:11,1|12,1|13,1:192.157:326.675,113.385:0.21692,0.21692:1.2706e-12,0.0390885,0.960981
+chr1	8135933	.	TATTTTATTTTATTT	.	.	.	END=8135947;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999845:3,3:3-3,3-3:16,14,0,0:3,16:NULL:187.842:366.612,131.36:0.0,0.0:0.0,8.98638e-05,0.999911	0/0:17:0.95758:3,3:3-3,3-3:8,9,0,0:3,8:NULL:112.795:326.675,113.385:0.0,0.0:1.3255e-26,0.025304,0.974748
+chr1	8136804	.	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	END=8136863;RU=ttgtt;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.0353704:19,19:12-19,12-19:0,17,0,20:NULL:3,2|4,4|5,1|7,2|8,1|10,3|11,2|13,1|14,1|18,3:295.425:366.612,131.36:1.8477,1.8477:0.0,0.0,1.0	0/0:47:0.999732:12,12:12-12,12-12:15,18,0,14:12,15:3,1|4,4|7,2|8,3|9,1|11,3:335.976:326.675,113.385:0.0,0.0:3e-45,0.000192081,0.999811
+chr1	8138672	.	AGCAGCAGCAGC	.	.	.	END=8138683;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:1.0:4,4:4-4,4-4:34,37,0,3:4,34:3,3:490.06:366.612,131.36:0.0,0.0:0.0,4.72644e-10,1.0	0/0:44:1.0:4,4:4-4,4-4:36,8,0,0:4,36:NULL:220.562:326.675,113.385:0.0,0.0:0.0,1.65479e-10,1.0
+chr1	8149815	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATA	.	.	END=8149860;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.759141:8,8:7-8,7-8:6,9,0,0:8,6:NULL:105.876:366.612,131.36:0.253975,0.253975:1.0,0.0,0.0	0/0:10:0.200773:23,23:22-24,22-24:2,4,0,2:23,2:6,1|12,1:61.958:326.675,113.385:0.828495,0.828495:0.00693742,0.433048,0.560128
+chr1	8152098	.	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	TTTATTTA	.	.	END=8152145;RU=ttta;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.6329:2,2:2-2,2-2:3,9,0,0:2,3:NULL:88.3409:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:27:0.98957:12,12:12-12,12-12:10,8,0,9:12,10:4,1|5,1|6,1|7,1|8,2|10,1|11,2:181.088:326.675,113.385:0.0,0.0:2.07029e-22,0.00534625,0.994669
+chr1	8163528	.	GAGAGGAGAGGAGAG	.	.	.	END=8163542;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999637:3,3:3-3,3-3:15,24,0,0:3,15:NULL:276.149:366.612,131.36:0.0,0.0:1.4e-44,0.000315992,0.999689	0/0:19:0.982968:3,3:3-3,3-3:9,10,0,0:3,9:NULL:130.81:326.675,113.385:0.0,0.0:3.91995e-27,0.0109445,0.989081
+chr1	8167006	.	AATTTAATTTAATTT	.	.	.	END=8167020;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:26,17,0,3:3,26:2,3:278.626:366.612,131.36:0.0,0.0:0.0,7.90845e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:170.283:326.675,113.385:0.0,0.0:0.0,9.03986e-08,1.0
+chr1	8167756	.	ATATATATATATAT	ATATATATATATATAT	.	.	END=8167769;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999899:7,7:7-7,7-7:17,12,0,0:7,17:NULL:188.649:366.612,131.36:0.0,0.0:2.91558e-24,5.57885e-05,0.999948	0/1:14:0.748426:7,8:7-7,7-8:9,5,0,0:7,7|8,2:NULL:86.5737:326.675,113.385:0.0,0.498798:2.74331e-13,0.00406086,0.995952
+chr1	8169940	.	AAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAAT	.	.	END=8169959;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:6,6:6-6,6-6:20,26,0,8:6,20:2,2|3,2|4,3|5,1:374.098:366.612,131.36:0.0,0.0:0.0,2.79208e-06,1.0	0/0:39:1.0:5,5:5-5,5-5:25,10,0,4:5,25:3,2|4,2:223.984:326.675,113.385:0.0,0.0:0.0,1.14854e-07,1.0
+chr1	8172972	.	CTTTCTTTCTTT	.	.	.	END=8172983;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999871:3,3:3-3,3-3:16,9,0,0:3,16:NULL:140.907:366.612,131.36:0.0,0.0:0.0,7.42312e-05,0.999926	0/0:28:0.999983:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.497:326.675,113.385:0.0,0.0:0.0,2.2279e-05,0.999979
+chr1	8173983	.	ATAAATAAATAA	.	.	.	END=8173994;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:20,9,0,2:3,20:2,2:177.08:366.612,131.36:0.0,0.0:0.0,4.86084e-06,0.999995	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.598:326.675,113.385:0.0,0.0:0.0,5.37023e-06,0.999995
+chr1	8174320	.	AGGAAGGAAGGA	.	.	.	END=8174331;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999648:3,3:3-3,3-3:15,12,0,0:3,15:NULL:172.893:366.612,131.36:0.0,0.0:0.0,0.000194825,0.999805	0/0:38:1.0:3,3:2-3,2-3:26,9,0,2:3,26:2,2:199.81:326.675,113.385:0.253975,0.253975:0.0,4.32072e-08,1.0
+chr1	8177036	.	AGGGAGGGAGGG	.	.	.	END=8177047;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999978:3,3:3-3,3-3:18,21,0,0:3,18:NULL:260.815:366.612,131.36:0.0,0.0:0.0,2.8336e-05,0.999972	0/0:22:0.997989:3,3:3-3,3-3:12,10,0,0:3,12:NULL:134.192:326.675,113.385:0.0,0.0:6.5965e-41,0.000969514,0.999035
+chr1	8179090	.	ACACACACACAC	ACACACACACACACAC	.	.	END=8179101;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999393:8,8:8-9,8-9:14,13,0,2:8,14:7,1|8,1:193.538:366.612,131.36:0.311527,0.311527:0.0,9.19338e-05,0.99991	0/0:40:1.0:6,6:6-14,6-14:29,8,0,2:6,29:5,1|6,1:207.577:326.675,113.385:3.72193,3.72193:0.0,5.69252e-09,1.0
+chr1	8183007	.	AAAGAAAGAAAG	.	.	.	END=8183018;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999844:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.479:366.612,131.36:0.0,0.0:0.0,7.54248e-05,0.999926	0/0:19:0.99913:3,3:3-3,3-3:13,6,0,0:3,13:NULL:108.628:326.675,113.385:0.0,0.0:3.9e-44,0.000489509,0.999514
+chr1	8186005	.	GAGAGAGAGAGAGAGAGAGAGAGA	GA	.	.	END=8186028;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0280876:1,1:1-6,1-6:0,20,0,0:NULL:NULL:187.222:366.612,131.36:1.59716,1.59716:0.784559,0.206896,0.00860633	0/0:44:0.962329:12,12:12-14,12-14:17,21,0,5:11,2|12,13|13,2:5,1|6,1|9,3:321.879:326.675,113.385:0.681228,0.681228:4.07662e-16,0.00669391,0.993323
+chr1	8198691	.	AAACAAACAAAC	.	.	.	END=8198702;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:25,27,0,0:3,25:NULL:345.572:366.612,131.36:0.0,0.0:0.0,1.38727e-07,1.0	0/0:61:1.0:3,3:3-3,3-3:38,21,0,2:3,38:2,2:357.131:326.675,113.385:0.0,0.0:0.0,1.73423e-11,1.0
+chr1	8204150	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=8204173;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.911458:6,6:5-6,5-6:7,17,0,3:6,7:3,1|4,2:210.269:366.612,131.36:0.499387,0.499387:1.76364e-24,0.0691695,0.930922	0/0:31:0.999832:6,6:6-6,6-6:16,10,0,5:6,16:3,1|4,4:192.651:326.675,113.385:0.0,0.0:0.0,0.000111831,0.999888
+chr1	8206337	.	CCACCACCACCA	.	.	.	END=8206348;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999348:4,4:4-4,4-4:14,9,0,0:4,14:NULL:132.349:366.612,131.36:0.0,0.0:1.551e-42,0.000394259,0.999606	0/0:32:1.00001:4,4:4-4,4-4:22,10,0,0:4,22:NULL:178.452:326.675,113.385:0.0,0.0:0.0,1.7583e-06,1.0
+chr1	8223406	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8223453;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.864123:18,18:18-18,18-18:7,5,0,0:18,7:NULL:77.959:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:36:0.985847:24,24:24-25,24-25:11,11,0,12:24,11:4,1|5,1|6,4|11,1|14,1|17,1|18,1|21,1|23,1:244.728:326.675,113.385:0.195027,0.195027:3.05043e-12,0.00493001,0.995084
+chr1	8225347	.	TCCCTCCCTCCC	.	.	.	END=8225358;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999401:3,3:3-3,3-3:14,29,0,0:3,14:NULL:311.694:366.612,131.36:0.0,0.0:0.0,0.000475557,0.999529	0/0:43:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:233.175:326.675,113.385:0.0,0.0:0.0,4.43822e-09,1.0
+chr1	8227632	.	TCCTTCCTTCCT	TCCT	.	.	END=8227643;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:43:1.0:3,3:3-3,3-3:30,11,0,2:3,30:2,2:240.348:326.675,113.385:0.0,0.0:0.0,3.05243e-09,1.0
+chr1	8229590	.	TAATAATAATAA	.	.	.	END=8229601;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999907:4,4:4-4,4-4:18,24,0,0:4,18:NULL:291.457:366.612,131.36:0.0,0.0:0.0,7.27538e-05,0.999927	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:165.956:326.675,113.385:0.0,0.0:0.0,1.92415e-06,1.0
+chr1	8234581	.	CTCTCTCTCTCTCT	CT	.	.	END=8234594;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:39:0.999659:7,7:6-7,6-7:24,11,0,3:6,2|7,22:5,2|6,1:229.004:326.675,113.385:0.294378,0.294378:1e-45,0.000343236,0.999659
+chr1	8242991	.	TTGTTGTTGTTGTTG	TTG	.	.	END=8243005;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:31:0.999806:5,5:5-5,5-5:15,13,0,3:5,15:4,3:199.113:326.675,113.385:0.0,0.0:1.78e-43,0.000116566,0.999887
+chr1	8246899	.	AAGCAAGCAAGCAAGC	.	.	.	END=8246914;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999315:4,4:4-4,4-4:14,9,0,0:4,14:NULL:145.545:366.612,131.36:0.0,0.0:0.0,0.000468451,0.999537	0/0:48:1.0:4,4:4-4,4-4:30,15,0,3:4,30:2,1|3,2:274.711:326.675,113.385:0.0,0.0:0.0,5.01533e-09,1.0
+chr1	8246965	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	END=8247014;RU=aagaa;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.7408:8,8:8-8,8-8:5,2,0,0:8,5:NULL:39.8858:366.612,131.36:0.0,0.0:0.922423,0.0776716,9.9957e-14	0/0:40:0.898434:10,10:7-10,7-10:6,16,0,17:10,6:3,1|4,2|5,3|6,2|7,2|8,5|9,2:289.122:326.675,113.385:1.44541,1.44541:3.21687e-14,0.052063,0.948018
+chr1	8266031	.	GTGGTGGTGGTG	.	.	.	END=8266042;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:24,11,0,0:4,24:NULL:196.125:366.612,131.36:0.0,0.0:0.0,6.85821e-07,1.0	0/0:23:0.997056:4,4:4-4,4-4:12,11,0,0:4,12:NULL:151.09:326.675,113.385:0.0,0.0:2.38039e-40,0.00193777,0.99807
+chr1	8266249	.	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	CAAAA	.	.	END=8266303;RU=caaaa;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0719045:1,1:1-2,1-2:0,14,0,0:NULL:NULL:126.948:366.612,131.36:0.253975,0.253975:0.901064,0.0980899,0.000948109	0/0:32:0.985697:11,11:11-11,11-11:11,13,0,8:11,11:3,1|4,2|5,2|6,2|8,1:230.731:326.675,113.385:0.0,0.0:4.34179e-34,0.0130186,0.987009
+chr1	8266615	.	ACACACACACACACACACACACACACACACACACACACAC	ACAC,ACACAC,ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8266654;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:12:0.0212688:2,3:1-3,1-4:0,12,0,0:NULL:NULL:107.779:366.612,131.36:0.622425,0.8247:0.721107,0.265612,0.0133016	0/3:37:0.629295:20,21:19-20,19-21:16,11,0,10:19,4|20,9|21,3:4,1|7,2|11,1|13,1|14,1|15,1|16,1|19,2:266.552:326.675,113.385:0.253975,0.783868:6.61717e-12,0.131809,0.868288
+chr1	8277000	.	ACCCACCCACCC	.	.	.	END=8277011;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.285533:3,3:3-3,3-3:2,0,0,0:3,2:NULL:7.81672:366.612,131.36:0.0,0.0:1.6909e-06,0.28606,0.713946	0/0:23:0.932852:3,3:3-3,3-3:7,16,0,0:3,7:NULL:175.271:326.675,113.385:0.0,0.0:2.30008e-19,0.0474448,0.952631
+chr1	8279683	.	CTCTCTCTCTCT	CTCTCTCTCTCTCT	.	.	END=8279694;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999973:7,7:7-8,7-8:18,17,0,2:7,18:5,1|6,1:241.681:366.612,131.36:0.309,0.309:0.0,1.18429e-05,0.999987	0/0:46:1.0:6,6:6-6,6-6:31,15,0,0:6,31:NULL:262.196:326.675,113.385:0.0,0.0:0.0,5.96934e-09,1.0
+chr1	8279713	.	TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC	TCCTC	.	.	END=8279762;RU=tcctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0751248:1,1:1-2,1-2:0,15,0,0:NULL:NULL:131.48:366.612,131.36:0.195027,0.195027:0.893997,0.104919,0.00118645	0/0:48:0.892845:10,10:3-10,3-10:8,20,0,18:10,8:2,4|3,3|4,3|5,1|6,4|7,2|8,1:347.23:326.675,113.385:2.778,2.778:1.45748e-16,0.0949286,0.905171
+chr1	8280732	.	CACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=8280753;RU=ca;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.287648:25,25:23-26,23-26:2,13,0,18:25,2:6,1|7,2|9,2|10,2|13,2|14,1|15,2|16,1|20,1|21,1|23,2|24,1:272.998:366.612,131.36:1.32466,1.32466:0.0,0.0,1.0	0/0:32:0.929785:11,11:11-12,11-12:21,6,0,4:11,18|12,3:5,2|6,1|10,1:187.392:326.675,113.385:0.398507,0.398507:3.70661e-29,5.56129e-06,0.999995
+chr1	8282353	.	GGGTGGGTGGGT	.	.	.	END=8282364;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.468139:3,3:1-3,1-3:3,16,0,0:3,3:NULL:153.316:366.612,131.36:0.442786,0.442786:3.80222e-09,0.316452,0.683557	0/0:27:0.987199:3,3:3-3,3-3:10,17,0,0:3,10:NULL:188.791:326.675,113.385:0.0,0.0:2.35018e-28,0.00808223,0.991936
+chr1	8290480	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=8290543;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.996497:14,14:6-14,6-14:12,18,0,17:14,12:3,1|5,1|6,2|8,2|9,4|10,3|11,1|12,3:344.02:366.612,131.36:3.27122,3.27122:0.999507,0.000495853,6.86637e-24	0/0:45:0.997484:16,16:16-16,16-16:12,15,0,18:16,12:3,2|5,1|6,2|8,3|9,2|10,3|13,1|15,3|16,1:324.595:326.675,113.385:0.0,0.0:1.61841e-34,0.000532592,0.999469
+chr1	8290943	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=8291032;RU=tct;PERIOD=3;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0418623:28,28:18-28,18-28:0,6,0,12:NULL:7,1|9,1|11,1|16,2|17,1|18,1|22,2|23,1|27,2:147.29:366.612,131.36:3.92719,3.92719:0.730439,0.253303,0.0162825	0/0:31:0.280789:30,30:26-30,26-30:3,9,0,17:30,3:5,2|6,1|8,1|9,3|12,1|14,2|16,1|19,1|20,1|21,1|23,2|28,1:227.676:326.675,113.385:1.32066,1.32066:5.78395e-06,0.449715,0.550385
+chr1	8293500	.	TGGTGGTGGTGG	.	.	.	END=8293511;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:27,21,0,0:4,27:NULL:299.948:366.612,131.36:0.0,0.0:0.0,9.36759e-08,1.0	0/0:32:0.999984:4,4:4-4,4-4:19,13,0,0:4,19:NULL:192.347:326.675,113.385:0.0,0.0:0.0,2.57329e-05,0.999978
+chr1	8295438	.	CTGCCTGCCTGC	.	.	.	END=8295449;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:26,22,0,3:3,26:2,3:329.686:366.612,131.36:0.0,0.0:0.0,5.76648e-08,1.0	0/0:20:0.997312:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.932:326.675,113.385:0.0,0.0:2.08556e-37,0.00150062,0.998504
+chr1	8296427	.	GGTAGGTAGGTA	.	.	.	END=8296438;RU=ggta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:194.976:366.612,131.36:0.0,0.0:0.0,5.29213e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.415:326.675,113.385:0.0,0.0:0.0,1.54454e-07,1.0
+chr1	8303139	.	ACCACCACCACCACCACC	.	.	.	END=8303156;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999833:6,6:6-6,6-6:16,11,0,0:6,16:NULL:168.394:366.612,131.36:0.0,0.0:0.0,0.000115779,0.999887	0/0:26:0.999411:6,6:4-6,4-6:14,7,0,4:6,14:4,3|5,1:145.61:326.675,113.385:0.851255,0.851255:3.77311e-40,0.000251334,0.99975
+chr1	8303362	.	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	.	.	END=8303409;RU=ataa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999021:11,11:11-11,11-11:13,14,0,10:11,13:2,1|3,1|4,2|7,1|8,1|9,1|10,3:254.298:366.612,131.36:0.0,0.0:0.999378,0.000625603,1.9791e-22	0/0:24:0.571462:12,12:11-14,11-14:4,9,0,8:12,4:3,1|6,1|7,1|8,3|9,1|11,1:157.02:326.675,113.385:1.11535,1.11535:6.3577e-09,0.241148,0.758872
+chr1	8303901	.	AACAACAACAACAAC	AACAACAACAACAACAAC	.	.	END=8303915;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:1.0:5,6:5-5,6-6:23,13,0,0:5,16|6,7:NULL:229.551:366.612,131.36:0.0,0.172061:0.0,1.36785e-17,1.0	0/0:24:0.997124:5,5:5-5,5-5:12,10,0,2:5,12:4,2:160.303:326.675,113.385:0.0,0.0:7.74398e-31,0.00124512,0.998761
+chr1	8314805	.	AATAAAATAAAATAA	.	.	.	END=8314819;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:23,17,0,0:3,23:NULL:246.085:366.612,131.36:0.0,0.0:0.0,4.89499e-07,1.0	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:138.841:326.675,113.385:0.0,0.0:0.0,1.05149e-05,0.999993
+chr1	8314957	.	CACAACACAACACAA	.	.	.	END=8314971;RU=cacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:235.946:366.612,131.36:0.0,0.0:0.0,2.10711e-06,1.0	0/0:29:0.999999:3,3:3-3,3-3:18,9,0,2:3,18:2,1|3,1:165.01:326.675,113.385:0.0,0.0:0.0,7.22613e-06,0.999994
+chr1	8316961	.	TATATATATATATA	TATATATATA	.	.	END=8316974;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:1.00001:5,5:5-5,5-5:22,16,0,0:5,22:NULL:231.619:366.612,131.36:0.0,0.0:1.0,6.09319e-07,0.0	0/0:21:0.999463:7,7:7-8,7-8:15,5,0,0:7,15:NULL:108.023:326.675,113.385:0.195027,0.195027:4.76262e-23,0.000320093,0.999682
+chr1	8321168	.	TTTGTTTGTTTG	.	.	.	END=8321179;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999991:3,3:3-3,3-3:18,23,0,4:3,18:2,4:300.988:366.612,131.36:0.0,0.0:0.0,1.71594e-05,0.999986	0/0:26:0.93009:3,3:3-3,3-3:6,15,0,5:3,6:2,5:193.937:326.675,113.385:0.0,0.0:1.02792e-20,0.0346144,0.965449
+chr1	8322155	.	CAACAACAACAACAA	CAACAACAACAA	.	.	END=8322169;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.999751:4,4:4-4,4-4:16,7,0,0:4,16:NULL:128.369:366.612,131.36:0.0,0.0:0.999888,0.000111333,1.484e-42	0/0:33:1.0:5,5:5-5,5-5:24,7,0,2:5,24:3,1|4,1:173.71:326.675,113.385:0.0,0.0:0.0,2.6353e-07,1.0
+chr1	8322582	.	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	.	.	END=8322666;RU=tctgt;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.331779:13,13:10-13,10-13:3,13,0,0:13,3:NULL:137.248:366.612,131.36:1.20206,1.20206:1.0,0.0,0.0	0/0:48:0.889489:17,17:17-17,17-17:6,23,0,19:17,6:2,1|3,1|5,1|6,2|7,3|9,1|10,1|11,1|12,3|13,1|15,1|16,2|17,1:381.173:326.675,113.385:0.278639,0.278639:2.99727e-17,0.0723204,0.927774
+chr1	8325886	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=8325921;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:1.0:8,8:8-8,8-8:26,19,0,7:8,26:2,1|3,1|5,1|6,2|7,2:332.825:366.612,131.36:0.0,0.0:1.0,1.00529e-07,3e-45	0/0:31:0.985159:9,9:8-9,8-9:9,13,0,8:9,9:2,1|4,1|6,1|7,4|8,1:214.639:326.675,113.385:0.45695,0.45695:5.96041e-20,0.00861212,0.991405
+chr1	8328000	.	CAACAACAACAA	.	.	.	END=8328011;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:225.419:366.612,131.36:0.0,0.0:0.0,4.10969e-07,1.0	0/0:35:1.0:4,4:4-4,4-4:20,15,0,0:4,20:NULL:214.427:326.675,113.385:0.0,0.0:0.0,7.2502e-06,0.999994
+chr1	8329731	.	ATAAATAAATAA	.	.	.	END=8329742;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:35,24,0,0:3,35:NULL:359.0:366.612,131.36:0.0,0.0:0.0,2.54448e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:30,14,0,0:3,30:NULL:246.505:326.675,113.385:0.0,0.0:0.0,5.56693e-09,1.0
+chr1	8330089	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8330126;RU=ag;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.835824:20,20:20-20,20-20:6,7,0,3:20,6:7,1|12,1|19,1:115.104:366.612,131.36:0.0,0.0:2.33946e-18,0.027077,0.972978	0/0:30:0.705345:19,19:19-20,19-20:12,12,0,6:19,10|20,2:4,1|8,1|9,1|11,1|13,1|16,1:216.776:326.675,113.385:0.452422,0.452422:1.00315e-13,0.00259924,0.997406
+chr1	8331327	.	TGTCTGTCTGTC	.	.	.	END=8331338;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:3,3:3-3,3-3:23,24,0,2:3,23:2,2:322.453:366.612,131.36:0.0,0.0:0.0,6.30554e-07,1.0	0/0:38:1.00001:3,3:3-3,3-3:21,13,0,4:3,21:2,4:233.26:326.675,113.385:0.0,0.0:0.0,1.12939e-06,1.0
+chr1	8332124	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8332161;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:44:0.725266:25,26:24-27,25-27:4,20,0,18:25,2|26,2:5,1|7,1|8,1|9,1|10,1|14,1|15,2|18,2|19,1|20,2|23,2|24,1|25,2:345.674:366.612,131.36:0.986131,0.685675:0.0,0.0,1.0	0/1:52:0.317539:19,24:19-19,19-25:16,20,0,16:18,2|19,14:4,1|6,2|8,1|9,1|11,2|12,1|14,3|15,1|17,1|18,1|19,1|24,1:396.996:326.675,113.385:0.0,2.71258:4.67477e-25,7.44892e-06,0.999994
+chr1	8333431	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	END=8333470;RU=tttgt;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:58:0.999958:7,7:7-7,7-7:17,27,0,14:7,17:2,1|3,5|4,2|5,1|6,5:417.359:366.612,131.36:0.0,0.0:0.999986,1.70365e-05,4.73916e-37	0/0:42:0.999865:8,8:8-9,8-9:16,15,0,10:8,16:3,2|4,3|6,2|7,3:282.05:326.675,113.385:0.382696,0.382696:0.0,7.31916e-05,0.999926
+chr1	8334958	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=8334981;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.0:5,5:5-5,5-5:25,14,0,5:5,25:3,4|4,1:264.435:366.612,131.36:0.0,0.0:1.0,2.64791e-07,0.0	0/0:34:0.571229:6,6:5-6,5-6:20,6,0,8:5,3|6,17:3,2|4,2|5,4:204.081:326.675,113.385:0.469019,0.469019:1.44932e-37,0.428869,0.571225
+chr1	8338614	.	ATAAATAAATAAATAAATAA	ATAAATAAATAAATAA	.	.	END=8338633;RU=ataa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.00001:4,4:4-4,4-4:21,15,0,3:4,21:2,2|3,1:246.6:366.612,131.36:0.0,0.0:1.0,2.3266e-06,0.0	0/0:32:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:2,1|3,2|4,1:178.83:326.675,113.385:0.0,0.0:0.0,2.26863e-06,1.0
+chr1	8338698	.	AATAATAATAAT	.	.	.	END=8338709;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:31,5,0,0:4,31:NULL:170.937:366.612,131.36:0.0,0.0:0.0,3.20903e-09,1.0	0/0:24:0.999899:4,4:4-4,4-4:17,7,0,0:4,17:NULL:129.851:326.675,113.385:0.0,0.0:0.0,7.15077e-05,0.999932
+chr1	8339191	.	CTGTGCTGTGCTGTG	.	.	.	END=8339205;RU=ctgtg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:36,21,0,2:3,36:2,2:353.993:366.612,131.36:0.0,0.0:0.0,4.50307e-11,1.0	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.963:326.675,113.385:0.0,0.0:0.0,6.85317e-06,0.999994
+chr1	8339827	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8339862;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.841567:13,13:11-13,11-13:6,3,0,4:13,6:4,1|10,1|11,1|12,1:87.0629:366.612,131.36:0.739465,0.739465:1.0,0.0,0.0	0/0:28:0.980216:18,18:14-19,14-19:10,6,0,8:18,10:6,2|7,1|9,2|12,2|17,1:159.194:326.675,113.385:1.50632,1.50632:4.74857e-16,0.00819059,0.99183
+chr1	8339980	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8340019;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:9:0.168409:22,22:19-22,19-22:2,6,0,0:22,2:NULL:68.9241:366.612,131.36:0.724736,0.724736:9.0371e-05,0.253796,0.746121	1/0:13:0.601332:19,20:19-21,20-21:5,5,0,2:19,2|20,3:4,1|11,1:85.3542:326.675,113.385:0.753387,0.40582:0.0111203,0.695401,0.293511
+chr1	8345278	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=8345305;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.99932:10,10:10-10,10-10:14,18,0,7:10,14:3,2|5,1|6,1|7,2|8,1:276.122:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:42:1.0:7,7:6-7,6-7:23,10,0,6:7,23:4,1|5,1|6,4:239.707:326.675,113.385:0.29703,0.29703:0.0,4.11408e-07,1.0
+chr1	8353434	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=8353449;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.997514:5,5:5-5,5-5:12,10,0,0:5,12:NULL:140.318:366.612,131.36:0.0,0.0:0.0,0.00119794,0.998807	0/0:26:0.999895:4,4:4-4,4-4:17,9,0,0:4,17:NULL:151.271:326.675,113.385:0.0,0.0:9.70261e-38,8.64309e-05,0.999917
+chr1	8354049	.	AAGCAAGCAAGC	.	.	.	END=8354060;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999679:3,3:3-3,3-3:15,16,0,0:3,15:NULL:195.511:366.612,131.36:0.0,0.0:0.0,0.000194791,0.999805	0/0:13:0.945666:3,3:3-3,3-3:7,4,0,2:3,7:2,2:78.2415:326.675,113.385:0.0,0.0:2.55084e-23,0.0192365,0.980801
+chr1	8357311	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8357328;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.979753:9,9:8-9,8-9:19,16,0,0:8,2|9,17:NULL:234.28:366.612,131.36:0.390807,0.390807:8.54647e-27,0.0202936,0.979746	0/0:43:1.0:9,9:9-9,9-9:26,12,0,4:9,26:6,1|7,1|8,2:242.065:326.675,113.385:0.0,0.0:0.0,6.70531e-08,1.0
+chr1	8366194	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8366227;RU=ct;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.236521:26,26:23-26,23-26:2,18,0,13:26,2:5,3|11,1|13,1|17,2|18,2|22,3|23,1:278.578:366.612,131.36:1.449,1.449:0.0,0.0,1.0	0/0:43:0.763277:17,17:16-17,16-17:21,12,0,8:16,6|17,15:4,1|9,2|11,1|12,1|13,1|14,1|16,1:277.096:326.675,113.385:0.696878,0.696878:3.64364e-12,0.236711,0.763312
+chr1	8366995	.	ATATATATATATATATATATATATATATATATAT	ATATATATATATATATAT	.	.	END=8367028;RU=at;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0306099:9,9:9-14,9-14:0,11,0,2:NULL:4,1|9,1:114.917:366.612,131.36:1.76671,1.76671:0.881275,0.115555,0.00327874	0/0:8:0.729332:17,17:17-17,17-17:6,2,0,0:17,6:NULL:46.4011:326.675,113.385:0.0,0.0:1.36574e-06,0.105537,0.894565
+chr1	8371543	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=8371606;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:13:0.926383:16,17:16-17,16-17:5,6,0,2:16,2|17,3:10,1|15,1:99.6572:366.612,131.36:0.429525,0.290354:4.86265e-08,0.0197682,0.980273	0/0:21:0.685203:16,16:16-16,16-16:5,8,0,8:16,5:5,2|7,1|10,1|11,2|12,1|14,1:155.276:326.675,113.385:0.19802,0.19802:1.05189e-07,0.206014,0.794033
+chr1	8374412	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=8374432;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:7,7:7-7,7-7:19,12,0,5:7,19:4,2|5,2|6,1:221.878:366.612,131.36:0.0,0.0:0.0,8.39317e-06,0.999994	0/0:33:0.999219:7,7:7-7,7-7:13,14,0,6:7,13:3,1|4,2|6,3:226.934:326.675,113.385:0.0,0.0:4.64972e-32,0.000408752,0.999592
+chr1	8374431	.	TGATGATGATGATGATGA	.	.	.	END=8374448;RU=tga;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:6,6:6-6,6-6:21,13,0,4:6,21:3,1|4,2|5,1:227.019:366.612,131.36:0.0,0.0:0.0,1.39271e-06,1.0	0/0:34:0.999992:6,6:6-6,6-6:18,11,0,5:6,18:3,1|4,3|5,1:213.13:326.675,113.385:0.0,0.0:0.0,1.50354e-05,0.999986
+chr1	8378065	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	.	END=8378114;RU=tcttt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.753591:10,10:10-10,10-10:5,9,0,5:10,5:3,1|4,1|7,2|9,1:143.055:366.612,131.36:0.139319,0.139319:3.18022e-16,0.130091,0.870006	0/0:22:0.902909:10,10:9-10,9-10:7,8,0,6:10,7:2,1|3,1|5,1|6,1|7,1|8,1:149.552:326.675,113.385:0.607117,0.607117:1.93876e-22,0.0627019,0.937389
+chr1	8383454	.	TAATTAATTAATTAAT	TAATTAATTAAT	.	.	END=8383469;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.700614:3,4:3-4,4-4:17,13,0,0:3,2|4,15:NULL:198.121:366.612,131.36:0.499975,0.0:1.21728e-38,0.700637,0.29937	0/0:24:0.999182:4,4:4-4,4-4:14,10,0,0:4,14:NULL:152.232:326.675,113.385:0.0,0.0:1.50491e-40,0.000573469,0.999431
+chr1	8384813	.	TGTGTGTGTGTG	.	.	.	END=8384824;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.998269:6,6:5-6,5-6:26,17,0,2:5,3|6,23:5,2:287.022:366.612,131.36:0.311527,0.311527:0.0,0.00173601,0.998269	0/0:44:1.0:6,6:6-6,6-6:26,17,0,0:6,26:NULL:264.41:326.675,113.385:0.139319,0.139319:0.0,1.56232e-07,1.0
+chr1	8389556	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=8389603;RU=tatc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:59:0.571161:11,12:11-11,11-12:15,26,0,18:11,15:3,2|4,2|5,3|6,1|7,4|8,1|10,2|11,2|12,1:446.744:366.612,131.36:0.0,0.48221:0.00027855,0.999721,9.60695e-16	0/0:41:0.966978:12,12:11-12,11-12:8,19,0,13:12,8:3,3|5,2|8,3|10,2|11,3:308.233:326.675,113.385:0.419363,0.419363:6.27891e-11,0.0183287,0.981709
+chr1	8389896	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	.	END=8389935;RU=atct;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.981228:10,10:10-10,10-10:9,20,0,14:10,9:2,2|3,1|4,3|5,2|6,2|8,2|9,2:327.676:366.612,131.36:0.19802,0.19802:4.86114e-22,0.01021,0.989813	0/0:51:0.999886:10,10:10-10,10-10:16,22,0,13:10,16:4,3|5,1|6,2|7,2|8,2|9,3:363.177:326.675,113.385:0.0,0.0:4.44127e-38,8.00208e-05,0.999924
+chr1	8389961	.	TTTGTTTGTTTG	.	.	.	END=8389972;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:218.76:366.612,131.36:0.0,0.0:0.0,2.83242e-06,1.0	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:348.37:326.675,113.385:0.0,0.0:0.0,3.40439e-08,1.0
+chr1	8409196	.	AAAAACAAAAACAAAAAC	.	.	.	END=8409213;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.783:366.612,131.36:0.0,0.0:0.0,4.60431e-08,1.0	0/0:14:0.983591:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.7495:326.675,113.385:0.0,0.0:3.68951e-30,0.00828025,0.991741
+chr1	8410948	.	CGCTCGCTCGCT	.	.	.	END=8410959;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99408:3,3:3-3,3-3:11,15,0,0:3,11:NULL:183.329:366.612,131.36:0.0,0.0:2.54557e-38,0.00344241,0.996565	0/0:64:1.0:3,3:3-3,3-3:39,19,0,6:3,39:2,6:366.886:326.675,113.385:0.0,0.0:0.0,6.181e-12,1.0
+chr1	8413506	.	TTATTTATTTAT	.	.	.	END=8413517;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:176.382:366.612,131.36:0.0,0.0:0.0,3.84885e-07,1.0	0/0:22:0.999463:3,3:3-3,3-3:14,8,0,0:3,14:NULL:128.065:326.675,113.385:0.0,0.0:0.0,0.000323489,0.999681
+chr1	8415286	.	AAACAAACAAACAAACAAAC	.	.	.	END=8415305;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999777:5,5:5-5,5-5:15,21,0,6:5,15:2,1|3,2|4,3:303.295:366.612,131.36:0.0,0.0:0.0,9.65488e-05,0.999903	0/0:43:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:2,1|3,5|4,1:263.434:326.675,113.385:0.0,0.0:0.0,8.23304e-07,1.0
+chr1	8418293	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=8418328;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:8,8:8-8,8-8:19,22,0,9:8,19:3,1|4,3|5,4|7,1:347.812:366.612,131.36:0.139319,0.139319:0.999995,4.34615e-06,1.75392e-34	0/0:44:1.0:9,9:9-9,9-9:24,13,0,6:9,24:3,1|4,1|6,1|7,1|8,2:265.715:326.675,113.385:0.0,0.0:0.0,3.37734e-07,1.0
+chr1	8419081	.	AAATAAATAAAT	.	.	.	END=8419092;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:220.143:366.612,131.36:0.0,0.0:0.0,4.41593e-06,0.999995	0/0:30:0.999885:3,3:2-3,2-3:16,13,0,0:3,16:NULL:178.943:326.675,113.385:0.419363,0.419363:0.0,7.18237e-05,0.999932
+chr1	8420846	.	AAATAAATAAAT	.	.	.	END=8420857;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.937:366.612,131.36:0.0,0.0:0.0,3.35584e-06,1.0	0/0:28:0.999923:3,3:3-3,3-3:17,11,0,0:3,17:NULL:163.458:326.675,113.385:0.0,0.0:0.0,4.61361e-05,0.999956
+chr1	8423083	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8423108;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.172272:21,21:18-22,18-22:2,4,0,2:21,2:11,1|14,1:60.6674:366.612,131.36:0.881911,0.881911:0.0,0.0,1.0	0/0:20:0.596815:13,13:11-14,11-14:14,6,0,0:11,2|12,2|13,8|14,2:NULL:135.215:326.675,113.385:0.827074,0.827074:9.63291e-06,0.326822,0.673181
+chr1	8424107	.	CCAGCCAGCCAG	.	.	.	END=8424118;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:211.855:366.612,131.36:0.0,0.0:0.0,2.95663e-07,1.0	0/0:27:1.00001:3,3:3-3,3-3:22,5,0,0:3,22:NULL:132.923:326.675,113.385:0.0,0.0:0.0,9.49426e-07,1.0
+chr1	8433296	.	TATTTATTTATT	.	.	.	END=8433307;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:177.46:366.612,131.36:0.0,0.0:0.0,5.30392e-08,1.0	0/0:10:0.980539:3,3:3-3,3-3:9,1,0,0:3,9:NULL:45.09:326.675,113.385:0.0,0.0:1.04721e-29,0.00803098,0.991988
+chr1	8433511	.	TATATATATATATATATATA	TATATATATATATATATA,TATATATATATATATATATATA	.	.	END=8433530;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.973682:9,9:8-9,8-9:19,22,0,0:8,3|9,16:NULL:292.357:366.612,131.36:0.438559,0.438559:0.999979,2.24515e-05,6.28827e-20	2/2:10:0.143587:11,11:8-11,8-11:2,5,0,0:11,2:NULL:53.8357:326.675,113.385:0.842923,0.842923:0.000431743,0.502089,0.497491
+chr1	8433926	.	TATATATATATA	.	.	.	END=8433937;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999997:6,6:6-7,6-7:19,12,0,0:6,19:NULL:189.643:366.612,131.36:0.169767,0.169767:1.64088e-30,1.25063e-05,0.999987	0/0:22:0.999781:6,6:6-6,6-6:16,5,0,0:6,16:NULL:109.602:326.675,113.385:0.139319,0.139319:9.12765e-26,0.000111527,0.999888
+chr1	8456266	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8456293;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.155711:16,16:16-27,16-27:2,4,0,0:16,2:NULL:47.4802:366.612,131.36:5.3798,5.3798:6.48768e-08,0.0609947,0.939094	0/0:29:0.99989:14,14:11-14,11-14:17,4,0,7:14,17:4,1|5,1|8,1|9,1|10,2|13,1:166.18:326.675,113.385:1.00465,1.00465:4.58367e-29,4.43602e-05,0.999956
+chr1	8470720	.	TCTCTCTCTCTCTC	.	.	.	END=8470733;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.16141:7,7:7-24,7-24:22,13,0,2:7,22:5,1|21,1:239.062:366.612,131.36:8.06485,8.06485:0.0,2.46782e-07,1.0	0/0:34:0.999993:7,7:7-7,7-7:19,15,0,0:7,19:NULL:221.843:326.675,113.385:0.0,0.0:8.84e-43,1.81607e-05,0.999985
+chr1	8470767	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8470826;RU=ct;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.892976:22,22:22-22,22-22:8,12,0,5:22,8:6,1|18,1|19,1|21,2:184.724:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/2:21:0.0222805:26,26:25-29,25-29:0,11,0,8:NULL:6,3|7,1|11,1|15,1|16,1|17,1:174.168:326.675,113.385:1.64368,1.64368:0.722255,0.257109,0.0206627
+chr1	8470857	.	CTCTCTCTCTCTCTCT	.	.	.	END=8470872;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999933:8,8:8-8,8-8:18,18,0,0:8,18:NULL:233.544:366.612,131.36:0.0990099,0.0990099:3.36816e-33,4.64844e-05,0.999956	0/0:27:0.868555:8,8:8-8,8-8:6,18,0,3:8,6:6,3:216.942:326.675,113.385:0.0,0.0:1.3158e-11,0.0731223,0.926973
+chr1	8477191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8477250;RU=ga;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:19:0.0277315:32,32:31-34,31-34:0,9,0,7:NULL:7,1|11,1|14,1|18,1|26,1|31,1|32,1:140.727:366.612,131.36:1.27412,1.27412:2.35232e-16,0.152828,0.84725	1/0:19:0.513868:29,30:23-30,23-30:4,9,0,5:29,2|30,2:7,1|12,1|15,1|18,1|19,1:147.648:326.675,113.385:1.81115,1.95434:0.0172261,0.766209,0.216644
+chr1	8480096	.	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	.	.	END=8480191;RU=agaaagga;PERIOD=8;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:24:0.998877:7,12:4-9,11-12:6,8,0,6:7,2|12,4:3,2|6,1|8,2|10,1:150.18:366.612,131.36:1.54513,0.456091:4.45744e-11,1.0,6.69644e-08	1/3:35:0.364967:6,10:6-11,9-11:4,11,0,18:6,4:2,1|3,2|4,1|5,2|6,3|7,1|8,1|9,5|10,2:242.488:326.675,113.385:0.899956,0.56427:0.61593,0.38413,1.79851e-19
+chr1	8496447	.	TCTCTCTCTCTC	TCTCTCTCTCTCTC	.	.	END=8496458;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.998725:7,7:5-7,5-7:14,14,0,0:7,14:NULL:191.968:366.612,131.36:0.863148,0.863148:0.0,0.000871573,0.999134	0/0:28:1.00001:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.068:326.675,113.385:0.0,0.0:7e-45,3.71249e-06,1.0
+chr1	8498887	.	TGTGTGTGTGTG	.	.	.	END=8498898;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:6,6:6-6,6-6:22,19,0,5:6,22:4,1|5,4:293.567:366.612,131.36:0.0,0.0:0.0,5.43531e-07,1.0	0/0:23:0.999971:6,6:6-6,6-6:18,5,0,0:6,18:NULL:113.239:326.675,113.385:0.0,0.0:8.34546e-39,2.40389e-05,0.999979
+chr1	8500395	.	AGGAAGGAAGGA	.	.	.	END=8500406;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.263:366.612,131.36:0.0,0.0:0.0,6.90293e-07,1.0	0/0:27:0.999531:3,3:3-3,3-3:14,11,0,2:3,14:2,2:170.995:326.675,113.385:0.0,0.0:0.0,0.000248712,0.999751
+chr1	8503531	.	TAAATAAATAAA	.	.	.	END=8503542;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999993:3,3:3-3,3-3:19,16,0,0:3,19:NULL:221.348:366.612,131.36:0.0,0.0:0.0,1.39744e-05,0.999987	0/0:26:0.998985:3,3:3-3,3-3:13,9,0,4:3,13:2,4:161.383:326.675,113.385:0.0,0.0:1.3e-43,0.000375542,0.999628
+chr1	8504809	.	TTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=8504823;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:0.999994:7,7:4-7,4-7:19,26,0,6:7,19:3,2|4,1|5,2|6,1:356.642:366.612,131.36:0.896026,0.896026:0.0,1.83484e-06,1.0	0/0:37:1.00001:5,5:5-5,5-5:23,8,0,6:5,23:3,1|4,5:210.727:326.675,113.385:0.0,0.0:0.0,2.7635e-07,1.0
+chr1	8528507	.	TTGTTGTTGTTG	.	.	.	END=8528518;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:22,13,0,0:4,22:NULL:203.703:366.612,131.36:0.0,0.0:0.0,9.52647e-07,1.0	0/0:26:0.999939:4,4:4-4,4-4:17,7,0,2:4,17:3,2:151.591:326.675,113.385:0.0,0.0:0.0,3.18312e-05,0.999971
+chr1	8529981	.	AACCAACCAACCAACC	AACCAACCAACC	.	.	END=8529996;RU=aacc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:40:1.0:3,4:3-3,4-4:27,11,0,2:3,10|4,17:2,1|3,1:240.874:366.612,131.36:0.0,0.0:0.0,1.0,4.47201e-20	0/0:24:0.985496:4,4:4-4,4-4:10,14,0,0:4,10:NULL:167.18:326.675,113.385:0.0,0.0:3.47962e-34,0.0120016,0.988025
+chr1	8536034	.	AAAACAAAACAAAAC	.	.	.	END=8536048;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.476:366.612,131.36:0.0,0.0:0.0,1.08851e-05,0.999993	0/0:38:1.00001:3,3:3-3,3-3:23,15,0,0:3,23:NULL:233.041:326.675,113.385:0.0,0.0:0.0,2.21728e-06,1.0
+chr1	8536113	.	CAACAACAACAACAACAACAACAACAA	CAACAACAACAACAACAA	.	.	END=8536139;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.495472:6,6:3-9,3-9:4,14,0,0:6,4:NULL:145.49:366.612,131.36:1.9144,1.9144:0.918823,0.0812714,3.42406e-12	0/0:34:0.999281:9,9:9-9,9-9:14,16,0,4:9,14:4,1|5,1|8,2:234.098:326.675,113.385:0.0,0.0:2.68761e-26,0.000352468,0.999651
+chr1	8536661	.	ACAACAACAACA	.	.	.	END=8536672;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:168.447:366.612,131.36:0.0,0.0:0.0,3.16091e-06,1.0	0/0:27:0.999897:4,4:4-4,4-4:16,8,0,3:4,16:3,3:158.328:326.675,113.385:0.0,0.0:0.0,3.98677e-05,0.999963
+chr1	8536682	.	CAAACAAACAAA	.	.	.	END=8536693;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999998:3,3:3-3,3-3:19,10,0,2:3,19:2,2:179.592:366.612,131.36:0.0,0.0:0.0,1.04607e-05,0.999993	0/0:24:0.999723:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.967:326.675,113.385:0.0,0.0:0.0,0.000151341,0.99985
+chr1	8537537	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=8537556;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.99989:4,4:3-4,3-4:16,7,0,4:4,16:2,1|3,3:155.271:366.612,131.36:0.40582,0.40582:0.0,4.45846e-05,0.999956	0/0:20:0.991856:4,4:4-4,4-4:10,8,0,2:4,10:3,2:128.224:326.675,113.385:0.0,0.0:6.05885e-31,0.00459612,0.995416
+chr1	8543734	.	AAATAAATAAAT	.	.	.	END=8543745;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:200.084:366.612,131.36:0.0,0.0:0.0,8.25062e-08,1.0	0/0:16:0.997637:3,3:3-3,3-3:12,4,0,0:3,12:NULL:81.7413:326.675,113.385:0.0,0.0:2.84343e-35,0.00106447,0.998938
+chr1	8554881	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=8554988;RU=agaggc;PERIOD=6;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:31:0.298195:6,21:5-13,13-21:2,6,0,21:6,2:2,2|3,2|4,3|5,1|6,1|7,1|8,3|9,1|10,2|12,1|16,2|18,1|19,1:216.764:366.612,131.36:3.12548,1.90866:4.36146e-16,1.0,3.07779e-23	2/0:51:0.994923:13,18:4-13,17-18:5,18,0,25:13,3|17,2:3,2|4,2|5,1|7,5|8,4|9,2|10,1|12,1|13,2|14,1|15,2|16,1|18,1:373.705:326.675,113.385:2.97959,0.547696:1.91093e-05,0.999985,2.24371e-15
+chr1	8557824	.	ACACACACACACAC	ACACACACACAC	.	.	END=8557837;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.994354:6,6:6-7,6-7:12,10,0,0:6,12:NULL:136.46:366.612,131.36:0.412766,0.412766:0.997344,0.00266321,3.95322e-22	0/0:35:1.00001:7,7:7-7,7-7:21,11,0,2:7,21:4,1|6,1:197.338:326.675,113.385:0.139319,0.139319:1.6042e-41,2.70255e-06,1.0
+chr1	8567230	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTA	.	.	END=8567268;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.97243:11,11:11-11,11-11:9,8,0,0:11,9:NULL:111.207:366.612,131.36:0.0,0.0:0.993655,0.00635861,1.57671e-20	0/0:14:0.809962:13,13:13-13,13-13:6,6,0,2:13,6:3,1|9,1:98.1398:326.675,113.385:0.0,0.0:1.63673e-10,0.119958,0.880145
+chr1	8574197	.	CACACACACACA	.	.	.	END=8574208;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:6,6:6-6,6-6:21,17,0,0:6,21:NULL:234.116:366.612,131.36:0.0,0.0:1e-45,4.21085e-06,0.999995	0/0:36:1.0:6,6:6-6,6-6:25,9,0,2:6,25:4,2:198.818:326.675,113.385:0.0,0.0:0.0,2.05172e-07,1.0
+chr1	8575616	.	TGGTGGTGGTGGTGGTGG	.	.	.	END=8575633;RU=tgg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999936:6,6:6-6,6-6:17,16,0,2:6,17:5,2:234.43:366.612,131.36:0.0,0.0:2.7e-44,3.00017e-05,0.999971	0/0:28:0.999978:6,6:6-6,6-6:18,8,0,2:6,18:4,1|5,1:159.315:326.675,113.385:0.0,0.0:0.0,1.73442e-05,0.999986
+chr1	8580889	.	GTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT	.	.	END=8580912;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.989305:10,10:9-10,9-10:17,21,0,4:9,2|10,15:5,2|7,1|9,1:302.27:366.612,131.36:0.298675,0.298675:0.999971,3.22529e-05,3.67174e-31	0/0:40:0.999625:12,12:12-13,12-13:24,10,0,5:12,22|13,2:5,3|11,2:236.795:326.675,113.385:0.284901,0.284901:6.62828e-34,5.70766e-07,1.0
+chr1	8584648	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8584699;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0306459:11,11:11-14,11-14:0,8,0,0:NULL:NULL:72.4529:366.612,131.36:0.952864,0.952864:1.0,0.0,0.0	0/0:9:0.24064:26,26:23-26,23-26:2,2,0,5:26,2:5,1|8,1|9,1|14,1|18,1:66.5773:326.675,113.385:0.772658,0.772658:0.000298698,0.390389,0.609378
+chr1	8584700	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATAT,ATATATATATATATATATATATATATATATATATATAT	.	.	END=8584747;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:10:0.0316378:19,19:17-20,17-20:0,9,0,0:NULL:NULL:82.3892:366.612,131.36:1.15795,1.15795:1.0,0.0,0.0	1/1:1:0.000252147:6,6:6-6,6-6:0,1,0,0:NULL:NULL:8.42831:326.675,113.385:0.0,0.0:0.107513,0.489833,0.402853
+chr1	8585797	.	TATTTATTTATTTATT	.	.	.	END=8585812;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.991404:4,4:4-4,4-4:11,15,0,0:4,11:NULL:180.622:366.612,131.36:0.0,0.0:6.17043e-36,0.00623376,0.993782	0/0:24:0.998301:4,4:4-4,4-4:13,11,0,0:4,13:NULL:151.104:326.675,113.385:0.0,0.0:9.11e-43,0.00118285,0.998823
+chr1	8586014	.	TTTATTTATTTA	.	.	.	END=8586025;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.996092:3,3:3-3,3-3:12,11,0,0:3,12:NULL:150.001:366.612,131.36:0.0,0.0:5.02997e-39,0.00182207,0.998185	0/0:22:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.173:326.675,113.385:0.0,0.0:0.0,7.8491e-05,0.999925
+chr1	8594736	.	TGTGTGTGTGTGTG	.	.	.	END=8594749;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.99945:7,7:7-7,7-7:14,18,0,2:7,14:6,2:240.607:366.612,131.36:0.0,0.0:1.37954e-27,0.000272071,0.999728	0/0:29:0.99987:7,7:7-7,7-7:16,8,0,5:7,16:4,1|5,2|6,2:178.756:326.675,113.385:0.0,0.0:7.19342e-32,4.09985e-05,0.999963
+chr1	8596349	.	TGTGTGTGTGTG	.	.	.	END=8596360;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.986206:6,6:6-6,6-6:10,8,0,0:6,10:NULL:106.886:366.612,131.36:0.0,0.0:6.00194e-24,0.00732323,0.992693	0/0:20:0.986306:6,6:6-6,6-6:10,10,0,0:6,10:NULL:133.658:326.675,113.385:0.0,0.0:4.46305e-24,0.00791973,0.9921
+chr1	8597826	.	CACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=8597851;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.818865:15,15:15-15,15-15:6,3,0,0:15,6:NULL:51.6084:366.612,131.36:0.0,0.0:7.6657e-20,0.0258792,0.97417	0/0:11:0.40379:13,13:13-14,13-14:3,3,0,4:13,3:5,1|11,1|12,2:69.6071:326.675,113.385:0.518267,0.518267:6.64642e-05,0.161811,0.838196
+chr1	8614957	.	AAACAAACAAACAAACAAAC	.	.	.	END=8614976;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:27,13,0,3:5,27:3,3:252.777:366.612,131.36:0.0,0.0:0.0,9.01005e-08,1.0	0/0:23:0.995445:5,5:5-5,5-5:11,10,0,2:5,11:4,2:149.524:326.675,113.385:0.0,0.0:6.34409e-38,0.00224629,0.997761
+chr1	8619173	.	GTTGTTGTTGTTGTT	GTTGTTGTTGTT,GTTGTTGTTGTTGTTGTT	.	.	END=8619187;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0910916:4,6:4-7,4-7:0,15,0,4:NULL:3,1|4,3:169.146:366.612,131.36:1.17826,1.11561:0.0425979,0.336559,0.620952	0/0:20:0.997823:5,5:5-5,5-5:12,6,0,2:5,12:4,2:118.793:326.675,113.385:0.0,0.0:3.09658e-36,0.000974604,0.999028
+chr1	8628070	.	TTTGTTTGTTTG	TTTG	.	.	END=8628081;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0968113:1,1:1-2,1-2:0,20,0,0:NULL:NULL:185.299:366.612,131.36:0.506017,0.506017:0.302128,0.512574,0.185307	0/0:18:0.996572:3,3:3-3,3-3:11,5,0,2:3,11:2,2:106.536:326.675,113.385:0.0,0.0:2.83415e-36,0.00109878,0.998906
+chr1	8628100	.	TTGTTTTGTTTTGTT	.	.	.	END=8628114;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999919:3,3:3-3,3-3:17,23,0,0:3,17:NULL:278.982:366.612,131.36:0.0,0.0:0.0,7.79595e-05,0.999925	0/0:21:0.999719:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.395:326.675,113.385:0.0,0.0:0.0,0.000150872,0.99985
+chr1	8628129	.	TTTATTTTTATTTTTATT	.	.	.	END=8628146;RU=tttatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999891:3,3:3-3,3-3:16,18,0,2:3,16:2,2:247.617:366.612,131.36:0.0,0.0:0.0,7.63338e-05,0.999925	0/0:19:0.999864:3,3:3-3,3-3:16,3,0,0:3,16:NULL:95.0823:326.675,113.385:0.0,0.0:0.0,7.19751e-05,0.999932
+chr1	8631314	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC	.	.	END=8631341;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.988226:14,14:13-14,13-14:18,5,0,2:13,3|14,15:7,1|11,1:144.884:326.675,113.385:0.236383,0.236383:1.25388e-15,0.0117186,0.988308
+chr1	8631352	.	TGTGTGTGTGTGTGTGTGTGTG	TG	.	.	END=8631373;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:22:0.679657:11,11:10-12,10-12:14,5,0,3:10,2|11,10|12,2:5,1|10,2:139.777:326.675,113.385:0.653165,0.653165:1.8551e-16,0.0629716,0.937121
+chr1	8631769	.	TTTTGTTTTGTTTTG	TTTTG	.	.	END=8631783;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:23:0.998185:3,3:3-3,3-3:12,9,0,2:3,12:2,2:143.831:326.675,113.385:0.0,0.0:2.94001e-37,0.000914917,0.999089
+chr1	8631787	.	GTTTGTTTGTTT	GTTT	.	.	END=8631798;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:172.164:326.675,113.385:0.0,0.0:0.0,1.10055e-05,0.999993
+chr1	8632668	.	CCCACCCACCCA	CCCACCCACCCACCCACCCA	.	.	END=8632679;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.996957:5,5:5-5,5-5:12,0,0,0:5,12:NULL:48.0199:366.612,131.36:0.0,0.0:1.27465e-30,0.000505948,0.999499	0/1:36:1.0:3,5:3-3,5-5:31,5,0,0:3,18|5,13:NULL:191.55:326.675,113.385:0.0,0.0:0.0,1.0066e-26,1.0
+chr1	8633725	.	ATAAATAAATAA	ATAA	.	.	END=8633736;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:24:0.999912:3,3:3-3,3-3:17,7,0,0:3,17:NULL:135.44:326.675,113.385:0.0,0.0:0.0,5.65693e-05,0.999947
+chr1	8633735	.	AACAACAACAAC	AAC	.	.	END=8633746;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.999715:4,4:4-4,4-4:16,10,0,0:4,16:NULL:157.321:326.675,113.385:0.0,0.0:1e-45,0.000207364,0.999796
+chr1	8635079	.	ACCCACCCACCC	.	.	.	END=8635090;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.436831:3,3:3-3,3-3:3,1,0,0:3,3:NULL:19.9896:366.612,131.36:0.0990099,0.0990099:1.20682e-08,0.229503,0.77053	0/0:11:0.808579:3,3:3-3,3-3:5,6,0,0:3,5:NULL:73.0765:326.675,113.385:0.0,0.0:7.69984e-14,0.0907137,0.909384
+chr1	8641425	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8641448;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997989:12,12:12-12,12-12:12,11,0,5:12,12:5,1|6,2|11,2:194.886:366.612,131.36:0.0,0.0:2.21356e-21,0.000836114,0.999166	0/0:17:0.998552:12,12:12-12,12-12:13,2,0,2:12,13:6,1|11,1:88.402:326.675,113.385:0.0,0.0:6.60585e-23,0.000666587,0.999339
+chr1	8642579	.	AAATAAATAAAT	.	.	.	END=8642590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.00001:3,3:3-4,3-4:19,29,0,4:3,19:2,4:367.151:366.612,131.36:0.253975,0.253975:0.0,6.69503e-06,0.999994	0/0:28:0.999431:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.869:326.675,113.385:0.0,0.0:1.361e-41,0.00026199,0.999742
+chr1	8642988	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8643027;RU=tc;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.321181:15,19:15-15,15-22:8,12,0,4:15,8:7,1|8,1|10,1|19,1:188.563:366.612,131.36:0.0,2.24742:0.321103,0.678909,4.43521e-22	0/0:27:0.41447:20,20:19-20,19-20:8,11,0,8:19,3|20,5:6,1|8,1|11,1|13,1|14,1|16,1|18,1|19,1:206.384:326.675,113.385:0.484441,0.484441:3.2159e-05,0.557393,0.442685
+chr1	8643034	.	TCTATCTATCTA	TCTATCTA	.	.	END=8643045;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.0739848:2,2:1-3,1-3:0,16,0,0:NULL:NULL:151.244:366.612,131.36:0.765136,0.765136:0.269062,0.506557,0.224385	0/0:27:0.999628:3,3:2-3,2-3:15,11,0,0:3,15:NULL:161.037:326.675,113.385:0.323567,0.323567:7.78753e-29,0.000218365,0.999782
+chr1	8643653	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTT	.	.	END=8643682;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0460221:4,4:2-5,2-5:0,17,0,2:NULL:4,2:163.884:366.612,131.36:1.01097,1.01097:0.386743,0.490343,0.123007	0/0:34:0.999927:6,6:6-6,6-6:17,11,0,5:6,17:3,3|4,1|5,1:207.421:326.675,113.385:0.139319,0.139319:1e-45,5.03197e-05,0.999949
+chr1	8643693	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8643718;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:25:0.32159:14,17:12-14,12-18:2,15,0,6:14,2:5,1|6,1|11,1|13,1|14,1|17,1:192.189:366.612,131.36:0.680941,1.99696:6.49809e-26,0.000350704,0.999652	0/2:38:0.456917:13,15:13-13,13-15:19,12,0,6:12,2|13,17:5,1|6,1|8,1|10,1|12,1|15,1:257.188:326.675,113.385:0.0,1.01474:4.28029e-29,3.84308e-06,1.0
+chr1	8646828	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATT	.	.	END=8646863;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.99891:7,7:7-7,7-7:13,18,0,2:7,13:4,1|6,1:234.583:366.612,131.36:0.0,0.0:0.999819,0.000181101,1.7486e-33	0/0:25:0.998611:9,9:4-9,4-9:13,6,0,4:9,13:6,1|7,2|8,1:137.185:326.675,113.385:2.04948,2.04948:8.80789e-28,0.000791479,0.999211
+chr1	8650375	.	ACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=8650398;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.996598:16,16:16-18,16-18:16,11,0,6:15,2|16,14:6,1|7,1|9,1|15,3:222.279:366.612,131.36:0.581383,0.581383:0.0,0.0,1.0	0/0:24:0.984644:12,12:11-12,11-12:17,3,0,4:11,3|12,14:8,1|11,3:137.599:326.675,113.385:0.270063,0.270063:5.28161e-17,0.0152271,0.984803
+chr1	8650639	.	ATATATATATATATATATATATATATATATATATATATAT	AT,ATATATATATATATATATATATATATATATAT	.	.	END=8650678;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00128449:1,1:1-6,1-6:0,4,0,0:NULL:NULL:35.4749:366.612,131.36:1.92492,1.92492:0.248497,0.563877,0.187649	2/2:4:0.0175477:16,16:16-20,16-20:0,2,0,0:NULL:NULL:17.2343:326.675,113.385:0.900283,0.900283:0.271692,0.499525,0.228792
+chr1	8650679	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=8650710;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.299029:19,19:17-19,17-19:3,3,0,0:19,3:NULL:41.0175:366.612,131.36:0.813329,0.813329:7.60869e-10,0.18253,0.817535	0/0:8:0.436188:16,16:16-16,16-16:3,3,0,2:16,3:11,1|15,1:54.5607:326.675,113.385:0.19802,0.19802:1.21553e-05,0.246219,0.753781
+chr1	8651209	.	AATAAATAAATA	AATA	.	.	END=8651220;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0982358:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.293:366.612,131.36:0.975134,0.975134:0.238523,0.50738,0.254128	0/0:32:1.0:3,3:3-3,3-3:24,5,0,3:3,24:2,3:160.953:326.675,113.385:0.0,0.0:0.0,1.48101e-07,1.0
+chr1	8651810	.	AAAACAAAAACAAAAACA	.	.	.	END=8651827;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:211.408:366.612,131.36:0.0,0.0:0.0,1.21047e-07,1.0	0/0:18:0.989372:3,3:3-3,3-3:10,8,0,0:3,10:NULL:112.49:326.675,113.385:0.0,0.0:6.9492e-33,0.0064146,0.993602
+chr1	8653498	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	.	END=8653537;RU=aagaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.503954:8,8:5-8,5-8:4,12,0,0:8,4:NULL:126.321:366.612,131.36:0.761926,0.761926:6.16962e-12,0.372315,0.627739	0/0:30:0.998573:8,8:8-8,8-8:13,12,0,5:8,13:3,1|4,1|5,2|7,1:202.014:326.675,113.385:0.0,0.0:4.65052e-38,0.000786841,0.999218
+chr1	8654962	.	CTCTCTCCTCTCTCCTCTCTC	CTCTCTC	.	.	END=8654982;RU=ctctctc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.250215:1,1:1-1,1-1:0,18,0,0:NULL:NULL:160.895:366.612,131.36:0.0990099,0.0990099:0.520212,0.417376,0.0625452	0/0:25:0.99915:3,3:3-3,3-3:14,11,0,0:3,14:NULL:158.356:326.675,113.385:0.0,0.0:5.11259e-39,0.00063414,0.99937
+chr1	8655539	.	TGTATATACAGTTTGTATATACAGTTTGTATATACAGTT	.	.	.	END=8655577;RU=tgtatatacagtt;PERIOD=13;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.991493:3,3:3-3,3-3:11,14,0,0:3,11:NULL:171.34:366.612,131.36:0.0,0.0:6.08752e-14,0.00739242,0.992625	0/0:38:1.0:3,3:3-3,3-3:27,11,0,0:3,27:NULL:220.313:326.675,113.385:0.0,0.0:7.89224e-34,2.1361e-07,1.0
+chr1	8661278	.	TCTGCGCACTGCCTCTCTGCGCACTGCCTCTCTGCGCACTGCCTC	.	.	.	END=8661322;RU=tctgcgcactgcctc;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.735443:3,3:1-3,1-3:5,4,0,0:3,5:NULL:63.5448:366.612,131.36:0.339533,0.339533:1.33779e-06,0.179636,0.820434	0/0:27:0.999987:3,3:3-3,3-3:20,7,0,0:3,20:NULL:149.294:326.675,113.385:0.0,0.0:1.29928e-24,2.25915e-05,0.999979
+chr1	8662879	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8662932;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.559272:24,24:21-24,21-24:4,17,0,14:24,4:5,1|6,1|7,3|9,1|12,2|14,1|17,1|19,1|21,2|22,1:288.885:366.612,131.36:1.34719,1.34719:0.955649,0.044423,3.39378e-08	0/0:30:0.79467:27,27:26-28,26-28:6,9,0,13:27,6:8,1|11,1|13,1|14,1|15,1|16,2|17,1|18,2|22,1|23,1|27,1:210.896:326.675,113.385:0.464609,0.464609:1.75214e-14,0.0702106,0.929885
+chr1	8670288	.	AAATAAATAAAT	.	.	.	END=8670299;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999475:3,3:3-3,3-3:14,13,0,0:3,14:NULL:169.599:366.612,131.36:0.0,0.0:0.0,0.000333998,0.999667	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.846:326.675,113.385:0.0,0.0:0.0,7.53837e-06,0.999994
+chr1	8675250	.	CACACACACACACACACA	CACACACACACA,CACACACACACACA	.	.	END=8675267;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.929463:6,7:6-6,6-10:23,14,0,2:5,2|6,16|7,3|9,2:4,1|7,1:266.324:366.612,131.36:0.0,1.13866:0.929583,0.0705108,5.71458e-32	0/0:29:0.69922:9,9:5-10,5-10:20,9,0,0:5,2|8,2|9,14|10,2:NULL:190.405:326.675,113.385:1.99244,1.99244:2.03531e-21,0.280196,0.719807
+chr1	8675272	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8675305;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.999897:14,14:14-14,14-14:22,16,0,4:13,2|14,20:6,1|7,1|8,1|13,1:274.611:366.612,131.36:0.0,0.0:1.0,7.88526e-07,0.0	0/0:29:0.907371:17,17:15-18,15-18:12,11,0,4:16,2|17,10:4,1|13,1|15,1|16,1:191.535:326.675,113.385:0.615775,0.615775:1.33605e-10,0.0899302,0.910167
+chr1	8675459	.	ACAGAAACACAGAAACACAGAAAC	.	.	.	END=8675482;RU=acagaaac;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999994:3,3:3-3,3-3:20,19,0,0:3,20:NULL:255.512:366.612,131.36:0.0,0.0:0.0,1.85232e-05,0.999985	0/0:25:0.999268:3,3:3-3,3-3:13,10,0,2:3,13:2,2:159.691:326.675,113.385:0.0,0.0:9.36e-43,0.000455439,0.999546
+chr1	8675986	.	ATTTATTTATTT	.	.	.	END=8675997;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:31,13,0,0:3,31:NULL:243.113:366.612,131.36:0.0,0.0:0.0,2.39922e-09,1.0	0/0:30:0.999964:3,3:3-3,3-3:18,12,0,0:3,18:NULL:186.787:326.675,113.385:0.0,0.0:0.0,2.80001e-05,0.999972
+chr1	8676389	.	AAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC,AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	END=8676418;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.960004:8,9:8-9,9-9:13,10,0,5:8,4|9,9:5,3|6,1|7,1:195.192:366.612,131.36:0.45695,0.0:0.0,4.26259e-06,0.999995	0/0:34:0.999914:6,6:6-6,6-6:17,9,0,8:6,17:3,3|4,2|5,3:213.522:326.675,113.385:0.0,0.0:5.66594e-34,3.7178e-05,0.999964
+chr1	8678460	.	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8678479;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.955016:17,18:13-17,13-18:7,10,0,6:17,5|18,2:6,1|8,2|15,1|16,2:180.984:366.612,131.36:1.33704,1.91348:0.0,0.0,1.0	0/0:14:0.896921:10,10:10-11,10-11:7,4,0,2:10,7:5,1|8,1:79.5285:326.675,113.385:0.475866,0.475866:1.70654e-11,0.0425545,0.957517
+chr1	8678493	.	TACATATATACATATATACATATA	.	.	.	END=8678516;RU=tacatata;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999933:3,3:3-3,3-3:17,10,0,0:3,17:NULL:163.081:366.612,131.36:0.0,0.0:0.0,5.9905e-05,0.999941	0/0:16:0.992139:3,3:3-3,3-3:10,4,0,2:3,10:2,2:88.166:326.675,113.385:0.0,0.0:2.3385e-30,0.00314205,0.996867
+chr1	8679768	.	ATAAAATAAAATAAA	.	.	.	END=8679782;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:3,3:3-3,3-3:20,22,0,2:3,20:2,2:296.659:366.612,131.36:0.0,0.0:0.0,3.54493e-06,1.0	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.886:326.675,113.385:0.0,0.0:0.0,3.57574e-07,1.0
+chr1	8681683	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	END=8681750;RU=aagg;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.280439:12,12:11-12,11-12:2,10,0,6:12,2:6,1|9,1|10,1|11,2|12,1:148.243:366.612,131.36:0.437216,0.437216:1.0,0.0,0.0	0/0:39:0.280034:17,17:13-17,13-17:2,17,0,19:17,2:2,1|4,1|5,2|6,2|7,3|8,1|10,3|12,1|13,3|15,2:298.812:326.675,113.385:1.83337,1.83337:2.37018e-05,0.427834,0.572237
+chr1	8682359	.	CACACACACACACACACACA	CACACACACACACACACACACA	.	.	END=8682378;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:32:0.691927:10,11:10-10,10-11:15,11,0,5:10,12|11,3:5,1|7,2|8,1|9,1:208.492:366.612,131.36:0.0,0.533001:1.26372e-21,5.01982e-05,0.999949	0/0:41:0.999694:10,10:10-11,10-11:15,17,0,8:10,15:6,2|7,1|8,1|9,3|10,1:286.511:326.675,113.385:0.169767,0.169767:4.6019e-29,8.81946e-05,0.999911
+chr1	8682430	.	CTCTCTCTCTCT	CTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8682441;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:1.0:5,5:5-5,5-5:20,10,0,0:5,20:NULL:171.799:366.612,131.36:0.0,0.0:0.999995,4.85419e-06,1.68552e-36	0/2:33:0.451644:6,13:6-6,5-13:14,17,0,2:5,2|6,12:5,1|13,1:252.805:326.675,113.385:0.0,3.78075:7.49433e-20,0.000777866,0.999226
+chr1	8682935	.	CACACACACACACACA	CACACACACACACA	.	.	END=8682950;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.152359:7,7:5-8,5-8:2,23,0,0:7,2:NULL:218.895:366.612,131.36:0.89526,0.89526:0.71237,0.287602,3.5247e-05	0/0:32:0.999976:8,8:8-8,8-8:18,12,0,2:8,18:4,1|6,1:195.974:326.675,113.385:0.0,0.0:1.15451e-31,2.82206e-05,0.999972
+chr1	8703164	.	GGCTCAGGGCTCAGGGCTCAG	.	.	.	END=8703184;RU=ggctcag;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:32,20,0,2:3,32:2,2:327.025:366.612,131.36:0.0,0.0:0.0,8.8737e-10,1.0	0/0:40:1.0:3,3:3-3,3-3:20,17,0,3:3,20:2,3:257.668:326.675,113.385:0.0,0.0:0.0,6.52146e-06,0.999994
+chr1	8704534	.	AACAAACAAACA	.	.	.	END=8704545;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.86:366.612,131.36:0.0,0.0:0.0,2.13067e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:28,8,0,0:3,28:NULL:181.495:326.675,113.385:0.0,0.0:0.0,2.64883e-08,1.0
+chr1	8705430	.	CAAACAAACAAA	.	.	.	END=8705441;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,11,0,2:3,22:2,2:208.072:366.612,131.36:0.0,0.0:0.0,1.44749e-06,1.0	0/0:29:0.999935:3,3:3-3,3-3:17,12,0,0:3,17:NULL:172.513:326.675,113.385:0.0,0.0:0.0,4.61238e-05,0.999956
+chr1	8707303	.	ATGATGATGATG	.	.	.	END=8707314;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:27,16,0,4:4,27:3,4:286.396:366.612,131.36:0.0,0.0:0.0,3.8379e-08,1.0	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:196.225:326.675,113.385:0.0,0.0:0.0,3.46047e-07,1.0
+chr1	8713399	.	AGCAGCAGCAGC	.	.	.	END=8713410;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:4,4:4-4,4-4:41,18,0,0:4,41:NULL:319.55:366.612,131.36:0.0,0.0:0.0,3.76502e-12,1.0	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:222.677:326.675,113.385:0.0,0.0:0.0,2.32344e-07,1.0
+chr1	8714830	.	CATAACATAACATAACATAACATAA	.	.	.	END=8714854;RU=cataa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:5,5:4-5,4-5:22,17,0,4:5,22:2,2|3,2:270.52:366.612,131.36:0.195027,0.195027:0.0,2.05309e-06,1.0	0/0:21:0.942765:5,5:5-5,5-5:7,8,0,6:5,7:2,1|3,3|4,2:140.677:326.675,113.385:0.0,0.0:7.30822e-19,0.0268526,0.973201
+chr1	8723775	.	CACACACACACACA	CACACACACACACACACA	.	.	END=8723788;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:1.0:7,9:7-7,9-9:22,13,0,0:7,11|9,11:NULL:214.794:366.612,131.36:0.0,0.0:0.0,9.26156e-24,1.0	0/0:32:0.976786:7,7:6-7,6-7:20,12,0,0:6,2|7,18:NULL:198.465:326.675,113.385:0.44763,0.44763:9.9095e-36,0.0232696,0.976773
+chr1	8723801	.	GAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGA	.	.	END=8723818;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.989256:11,11:10-12,10-12:21,13,0,2:10,2|11,17|12,2:6,1|9,1:228.637:366.612,131.36:0.42884,0.42884:0.0,2.20501e-06,1.0	0/0:29:0.999479:9,9:9-9,9-9:15,14,0,0:9,15:NULL:187.994:326.675,113.385:0.0,0.0:3.7835e-27,0.000316983,0.999683
+chr1	8724576	.	AAAGAAAGAAAG	.	.	.	END=8724587;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.744:366.612,131.36:0.0,0.0:0.0,2.32757e-06,1.0	0/0:24:0.999755:3,3:3-3,3-3:15,7,0,2:3,15:2,2:134.146:326.675,113.385:0.0,0.0:0.0,9.06099e-05,0.999911
+chr1	8734504	.	ACACACACACAC	.	.	.	END=8734515;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:6,6:5-6,5-6:20,10,0,0:6,20:NULL:172.515:366.612,131.36:0.21692,0.21692:6.7e-44,1.11878e-05,0.999993	0/0:27:0.980354:6,6:5-7,5-7:19,5,0,2:5,2|6,17:4,1|5,1:149.183:326.675,113.385:0.503882,0.503882:8.75392e-34,0.0196928,0.980346
+chr1	8735119	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACA	.	.	END=8735148;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.378135:16,17:15-16,15-18:9,17,0,6:15,3|16,6:7,1|8,2|10,1|13,1|17,1:260.347:366.612,131.36:0.431574,1.08333:1.95696e-19,5.77162e-07,1.0	0/0:20:0.943262:15,15:14-15,14-15:12,4,0,4:14,2|15,10:5,2|10,1|12,1:123.677:326.675,113.385:0.298675,0.298675:5.12276e-12,0.0537033,0.946383
+chr1	8737285	.	AAACAAACAAAC	.	.	.	END=8737296;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:299.192:366.612,131.36:0.0,0.0:0.0,1.45837e-10,1.0	0/0:38:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.572:326.675,113.385:0.0,0.0:0.0,8.58223e-09,1.0
+chr1	8737336	.	ACAAAACAAAACAAAACAAAACAAAACAAA	ACAAAACAAAACAAAACAAA	.	.	END=8737365;RU=acaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.999942:4,4:4-4,4-4:16,23,0,4:4,16:2,2|3,2:303.954:366.612,131.36:0.0,0.0:0.999987,1.18551e-05,0.0	0/0:28:0.993833:6,6:6-6,6-6:10,13,0,5:6,10:3,1|4,1|5,3:191.525:326.675,113.385:0.0,0.0:3.38817e-33,0.00281481,0.997193
+chr1	8737581	.	AAAACAAAACAAAACAAAAC	.	.	.	END=8737600;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:4,4:3-4,3-4:22,16,0,2:4,22:3,2:264.311:366.612,131.36:0.311527,0.311527:0.0,3.04094e-06,1.0	0/0:18:0.995904:4,4:4-4,4-4:11,4,0,3:4,11:3,3:102.332:326.675,113.385:0.0,0.0:8.70255e-37,0.00136317,0.998641
+chr1	8743177	.	TATATATATATATA	TATATATATA	.	.	END=8743190;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.867895:5,5:5-5,5-5:6,13,0,0:5,6:NULL:145.689:366.612,131.36:0.0,0.0:0.977026,0.0230208,1.56871e-16	0/0:14:0.889317:7,7:6-8,6-8:7,5,0,0:7,7:NULL:73.888:326.675,113.385:0.608246,0.608246:3.74191e-10,0.065115,0.934977
+chr1	8743192	.	TTGTTGTTGTTGTTG	TTGTTGTTGTTG	.	.	END=8743206;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.110593:4,4:4-5,4-5:0,13,0,2:NULL:4,2:136.973:366.612,131.36:0.489874,0.489874:0.214803,0.531368,0.253882	0/0:21:0.995999:5,5:5-5,5-5:11,8,0,2:5,11:3,1|4,1:129.239:326.675,113.385:0.0,0.0:1.82559e-33,0.00187478,0.998132
+chr1	8747307	.	CTTTCTTTCTTT	.	.	.	END=8747318;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.997834:3,3:3-3,3-3:12,4,0,0:3,12:NULL:83.5965:366.612,131.36:0.0,0.0:8.14254e-35,0.000934292,0.999067	0/0:19:0.998932:3,3:3-3,3-3:13,6,0,0:3,13:NULL:103.89:326.675,113.385:0.0,0.0:9.97061e-38,0.00050504,0.999499
+chr1	8747937	.	TTTATTTATTTA	.	.	.	END=8747948;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999946:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.806:366.612,131.36:0.0,0.0:0.0,2.47065e-05,0.999978	0/0:13:0.98465:3,3:3-3,3-3:9,4,0,0:3,9:NULL:73.8153:326.675,113.385:0.0,0.0:7.94114e-30,0.00766915,0.992348
+chr1	8748060	.	TTTTGTTTTGTTTTG	TTTTGTTTTG	.	.	END=8748074;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.080817:2,2:1-4,1-4:0,10,0,0:NULL:NULL:90.1502:366.612,131.36:0.699686,0.699686:0.285972,0.507413,0.206621	0/0:15:0.990939:3,3:3-3,3-3:10,5,0,0:3,10:NULL:87.1438:326.675,113.385:0.0,0.0:2.88402e-32,0.00531553,0.9947
+chr1	8750524	.	TCTCTCTCTCTC	TCTCTCTC	.	.	END=8750535;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:28:1.0:4,6:4-6,6-6:18,10,0,0:4,5|6,13:NULL:181.687:366.612,131.36:0.647134,0.0:4.78554e-25,1.0,1.79426e-07	0/0:19:0.997357:6,6:6-6,6-6:12,5,0,2:6,12:4,2:114.706:326.675,113.385:0.0,0.0:1.90457e-24,0.00151952,0.998488
+chr1	8750590	.	TCTCTCTCTC	.	.	.	END=8750599;RU=tc;PERIOD=2;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.958213:5,5:5-5,5-5:8,12,0,0:5,8:NULL:147.136:366.612,131.36:0.0990099,0.0990099:7.00962e-20,0.0238383,0.976206	0/0:17:0.989181:5,5:5-13,5-13:11,5,0,0:5,11:NULL:93.3733:326.675,113.385:3.99824,3.99824:3.62781e-27,0.00379959,0.99621
+chr1	8753159	.	AGAGAGAGAGAG	.	.	.	END=8753170;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999384:6,6:6-6,6-6:14,15,0,0:6,14:NULL:194.554:366.612,131.36:0.0,0.0:2.70498e-32,0.000309613,0.999691	0/0:34:0.999963:6,6:6-6,6-6:17,14,0,3:6,17:4,1|5,2:225.969:326.675,113.385:0.0,0.0:4.18258e-39,1.76549e-05,0.999986
+chr1	8754911	.	TTTGTTTGTTTG	.	.	.	END=8754922;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.992501:3,3:3-3,3-3:10,5,0,0:3,10:NULL:85.1877:366.612,131.36:0.0,0.0:1.03384e-34,0.00308253,0.996927	0/0:22:0.997164:3,3:3-4,3-4:12,9,0,0:3,12:NULL:132.107:326.675,113.385:0.475866,0.475866:1.13921e-40,0.00179077,0.998216
+chr1	8758313	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=8758332;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.994917:5,5:5-5,5-5:11,12,0,4:5,11:3,3|4,1:184.025:366.612,131.36:0.0,0.0:5.55056e-32,0.00249623,0.997511	0/0:27:0.999632:5,5:5-5,5-5:14,10,0,3:5,14:3,2|4,1:170.794:326.675,113.385:0.0,0.0:7.5234e-41,0.000212208,0.999789
+chr1	8759459	.	TATTTATTTATT	.	.	.	END=8759470;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.917:366.612,131.36:0.0,0.0:0.0,8.85738e-06,0.999994	0/0:23:0.999922:3,3:3-3,3-3:17,6,0,0:3,17:NULL:121.223:326.675,113.385:0.0,0.0:0.0,4.54659e-05,0.999956
+chr1	8765668	.	AATAAATAAATA	.	.	.	END=8765679;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.985827:3,3:3-3,3-3:9,16,0,0:3,9:NULL:194.591:366.612,131.36:0.0,0.0:7.47013e-30,0.0105569,0.989469	0/0:13:0.959532:3,3:3-3,3-3:8,5,0,0:3,8:NULL:77.3003:326.675,113.385:0.0,0.0:1.84624e-26,0.0212171,0.978826
+chr1	8771953	.	AGGAAAGGAAAGGAA	.	.	.	END=8771967;RU=aggaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999873:3,3:3-3,3-3:16,8,0,0:3,16:NULL:132.728:366.612,131.36:0.0,0.0:0.0,7.98286e-05,0.999924	0/0:26:0.999792:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.516:326.675,113.385:0.0,0.0:0.0,0.000158064,0.999843
+chr1	8778970	.	TTTCTTTCTTTC	.	.	.	END=8778981;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999944:3,3:3-3,3-3:17,14,0,2:3,17:2,2:215.313:366.612,131.36:0.0,0.0:0.0,2.12768e-05,0.999979	0/0:31:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:175.96:326.675,113.385:0.0,0.0:0.0,6.06985e-06,0.999994
+chr1	8783282	.	ATATATATATATAT	ATATATATATATATATAT	.	.	END=8783295;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.997796:9,9:8-9,8-9:13,13,0,0:9,13:NULL:170.275:366.612,131.36:0.222277,0.222277:1.11918e-35,0.00061759,0.999385	0/0:13:0.49888:7,7:6-7,6-7:10,3,0,0:6,2|7,8:NULL:75.1751:326.675,113.385:0.486863,0.486863:9.80189e-09,0.497037,0.502977
+chr1	8784610	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8784647;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.644557:11,11:10-12,10-12:14,13,0,0:10,2|11,10|12,2:NULL:188.579:366.612,131.36:0.536667,0.536667:1.0,0.0,0.0	0/0:24:0.971893:19,19:17-19,17-19:9,6,0,7:19,9:7,1|11,2|13,1|17,2|18,1:148.768:326.675,113.385:0.634591,0.634591:7.52986e-13,0.0110308,0.988993
+chr1	8784672	.	AAAACAAAACAAAAC	.	.	.	END=8784686;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999716:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.975:366.612,131.36:0.0,0.0:0.0,0.000161651,0.999841	0/0:22:0.998793:3,3:3-3,3-3:13,9,0,0:3,13:NULL:133.991:326.675,113.385:0.0,0.0:1e-44,0.000765121,0.99924
+chr1	8785066	.	TAAATAAATAAA	.	.	.	END=8785077;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999868:3,3:3-3,3-3:16,13,0,2:3,16:2,2:195.894:366.612,131.36:0.0,0.0:0.0,6.85765e-05,0.999933	0/0:22:0.999799:3,3:3-3,3-3:16,6,0,0:3,16:NULL:123.274:326.675,113.385:0.0,0.0:0.0,0.000122937,0.999879
+chr1	8786909	.	CTCTTGCTCTTGCTCTTGCTCTTG	.	.	.	END=8786932;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998181:4,4:4-4,4-4:12,14,0,2:4,12:3,2:192.038:366.612,131.36:0.0,0.0:4.48662e-35,0.0012672,0.998739	0/0:32:0.998131:4,4:4-4,4-4:12,17,0,3:4,12:3,3:221.197:326.675,113.385:0.0,0.0:8.55373e-35,0.00145832,0.998549
+chr1	8790230	.	CTCTTGCTCTTGCTCTTGCTCTTG	CTCTTGCTCTTGCTCTTGCTCTTGCTCTTG	.	.	END=8790253;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999955:5,5:4-5,4-5:18,17,0,5:5,18:2,1|3,1|4,3:261.763:366.612,131.36:0.169767,0.169767:0.0,1.11323e-05,0.999993	0/0:22:0.985433:4,4:4-4,4-4:9,11,0,2:4,9:3,2:153.147:326.675,113.385:0.0,0.0:4.64383e-30,0.00909807,0.990925
+chr1	8794964	.	ATATATATATATATATATATATAT	ATATATATATATAT,ATATATATATATATATATATAT	.	.	END=8794987;RU=at;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:1.00001:7,7:7-7,7-7:22,5,0,0:7,22:NULL:135.279:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/0:11:0.932931:11,12:11-12,11-12:6,5,0,0:11,2|12,4:NULL:74.3812:326.675,113.385:0.484441,0.21692:0.00011127,0.943244,0.0567284
+chr1	8796394	.	ATTTATTTATTT	ATTT	.	.	END=8796405;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0726585:1,1:1-1,1-1:0,14,0,0:NULL:NULL:121.378:366.612,131.36:0.0,0.0:0.142909,0.492976,0.364275	0/0:20:0.998744:3,3:3-3,3-3:13,7,0,0:3,13:NULL:116.182:326.675,113.385:0.0,0.0:1.53173e-38,0.000632784,0.99937
+chr1	8798684	.	AGCAGCAGCAGC	AGC	.	.	END=8798695;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.0214006:1,1:1-4,1-4:0,1,0,0:NULL:NULL:8.21738:366.612,131.36:1.29472,1.29472:0.184075,0.489982,0.326062	0/0:37:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:226.317:326.675,113.385:0.0,0.0:0.0,5.43975e-06,0.999995
+chr1	8800250	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGA	.	.	END=8800297;RU=agga;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.139509:1,1:1-1,1-1:0,19,0,0:NULL:NULL:173.395:366.612,131.36:0.0,0.0:0.936995,0.0627439,0.000350964	0/0:22:0.594842:12,12:12-12,12-12:4,8,0,10:12,4:2,1|4,2|6,1|7,2|8,1|9,2|11,1:162.595:326.675,113.385:0.0990099,0.0990099:1.58453e-08,0.225544,0.774489
+chr1	8800676	.	TAAATAAATAAA	.	.	.	END=8800687;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999959:3,3:3-3,3-3:18,10,0,0:3,18:NULL:167.07:366.612,131.36:0.0,0.0:0.0,2.59607e-05,0.999978	0/0:20:0.99217:3,3:3-3,3-3:10,8,0,2:3,10:2,2:128.633:326.675,113.385:0.0,0.0:5.11394e-33,0.00312934,0.996881
+chr1	8800714	.	AACAACAACAAC	.	.	.	END=8800725;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.987725:4,4:4-4,4-4:11,14,0,0:4,11:NULL:174.339:366.612,131.36:0.0,0.0:2.62346e-30,0.00853959,0.991479	0/0:21:0.992712:4,4:4-4,4-4:11,10,0,0:4,11:NULL:135.379:326.675,113.385:0.0,0.0:6.64144e-31,0.00496701,0.995047
+chr1	8805447	.	GGGGGAGGGGGAGGGGGA	GGGGGA	.	.	END=8805464;RU=ggggga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.109134:1,1:1-2,1-2:0,16,0,0:NULL:NULL:147.015:366.612,131.36:0.38244,0.38244:0.332073,0.509501,0.15845	0/0:20:0.990143:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.811:326.675,113.385:0.0,0.0:1.04539e-30,0.00676799,0.993249
+chr1	8807437	.	TTTGTTTGTTTG	.	.	.	END=8807448;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:182.822:366.612,131.36:0.0,0.0:0.0,8.47762e-06,0.999994	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:195.556:326.675,113.385:0.0,0.0:0.0,1.13934e-06,1.0
+chr1	8810096	.	TAAATAAATAAA	.	.	.	END=8810107;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.990155:3,3:3-3,3-3:10,7,0,0:3,10:NULL:106.147:366.612,131.36:0.0,0.0:1.39982e-33,0.00538124,0.994632	0/0:25:0.999928:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.067:326.675,113.385:0.0,0.0:0.0,3.91424e-05,0.999963
+chr1	8810477	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=8810494;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:21,20,0,0:3,21:NULL:267.378:366.612,131.36:0.0,0.0:0.0,2.79993e-06,1.0	0/0:30:0.999814:3,3:3-3,3-3:15,12,0,3:3,15:2,3:192.709:326.675,113.385:0.0,0.0:0.0,9.18495e-05,0.99991
+chr1	8814191	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8814208;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999651:9,9:8-9,8-9:21,14,0,5:8,2|9,19:4,1|6,1|7,2|8,1:257.454:366.612,131.36:0.169767,0.169767:1.22881e-31,0.000361579,0.999643	0/0:26:0.966826:9,9:8-10,8-10:17,3,0,5:8,3|9,14:4,1|7,1|8,2|9,1:142.198:326.675,113.385:0.461008,0.461008:3.05001e-29,0.0331402,0.966922
+chr1	8815663	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8815726;RU=tc;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:19:0.0165681:30,46:16-31,16-49:0,10,0,7:NULL:13,2|15,1|18,1|30,2|46,1:150.577:366.612,131.36:7.66383,14.7344:8.05921e-08,0.577402,0.422683	1/1:17:0.0181341:28,28:28-32,28-32:0,8,0,7:NULL:4,1|8,1|9,1|11,1|21,1|22,1|26,1:128.18:326.675,113.385:1.25387,1.25387:0.387564,0.473392,0.139121
+chr1	8816641	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=8816672;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.96131:13,13:13-13,13-13:9,14,0,0:13,9:NULL:162.474:366.612,131.36:0.139319,0.139319:0.997654,0.00235383,2.07518e-22	0/0:23:0.80832:16,16:15-16,15-16:10,9,0,4:15,2|16,8:8,1|12,1|15,2:161.939:326.675,113.385:0.390807,0.390807:1.74484e-09,0.183516,0.816552
+chr1	8817844	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8817913;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.150498:11,11:11-18,11-18:23,11,0,5:11,23:6,1|7,2|10,1|16,1:257.355:366.612,131.36:2.58994,2.58994:1.0,0.0,0.0	2/2:19:0.011417:34,34:9-34,9-34:0,11,0,8:NULL:9,2|11,1|18,1|21,1|23,1|29,1|33,1:161.9:326.675,113.385:9.00396,9.00396:0.497947,0.47067,0.0314397
+chr1	8819083	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8819132;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:44:0.78078:27,28:26-27,26-28:7,28,0,9:26,3|27,4:5,2|11,1|12,1|18,1|20,1|23,1|26,1|28,1:373.218:366.612,131.36:0.398507,0.7392:2.9394e-26,7.47407e-05,0.999926	1/1:26:0.153341:26,26:24-26,24-26:2,12,0,10:26,2:5,2|6,2|8,1|10,1|16,1|17,1|19,1|23,1:201.787:326.675,113.385:0.915079,0.915079:0.000331256,0.3795,0.620228
+chr1	8820361	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8820396;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:29:0.301035:25,29:25-25,25-29:5,14,0,10:25,5:4,1|6,1|8,1|12,1|13,2|17,1|18,1|23,1|27,1:236.256:366.612,131.36:0.0,1.69778:0.0,0.0,1.0	0/1:29:0.294315:18,23:18-19,16-23:9,9,0,9:18,7|19,2:5,2|6,1|8,1|9,2|13,1|14,1|23,1:201.422:326.675,113.385:0.236383,2.38098:3.51614e-15,2.22824e-07,1.0
+chr1	8823929	.	TGGGTGGGTGGG	.	.	.	END=8823940;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:30,22,0,4:3,30:2,4:347.42:366.612,131.36:0.0,0.0:0.0,4.20299e-09,1.0	0/0:30:0.99987:3,3:3-3,3-3:15,12,0,3:3,15:2,3:186.501:326.675,113.385:0.0,0.0:0.0,6.40528e-05,0.99994
+chr1	8824054	.	ATTTATTTATTT	.	.	.	END=8824065;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:259.214:366.612,131.36:0.0,0.0:0.0,2.92656e-07,1.0	0/0:40:1.0:3,3:3-3,3-3:30,8,0,2:3,30:2,2:203.191:326.675,113.385:0.0,0.0:0.0,2.58817e-09,1.0
+chr1	8827247	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=8827291;RU=ttg;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.00001:10,10:8-10,8-10:21,24,0,10:10,21:4,2|5,1|7,2|8,1|9,4:383.611:366.612,131.36:0.339533,0.339533:1.0,0.0,0.0	0/0:47:0.999999:15,15:15-15,15-15:19,13,0,15:15,19:3,2|4,1|5,1|6,1|7,2|9,1|10,1|11,1|12,1|13,1|14,3:312.501:326.675,113.385:0.0,0.0:1.25107e-38,7.04996e-06,0.999994
+chr1	8833833	.	ACCACCACCACCACCACC	.	.	.	END=8833850;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:1.0:6,6:6-6,6-6:34,33,0,7:6,34:3,1|4,3|5,3:485.676:366.612,131.36:0.0,0.0:0.0,1.99673e-10,1.0	0/0:47:1.0:6,6:6-6,6-6:28,11,0,8:6,28:3,1|4,3|5,4:273.788:326.675,113.385:0.0,0.0:0.0,1.24028e-08,1.0
+chr1	8834106	.	AAAGAAAGAAAG	.	.	.	END=8834117;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:28,25,0,0:3,28:NULL:342.64:366.612,131.36:0.0,0.0:0.0,1.26556e-07,1.0	0/0:34:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:202.146:326.675,113.385:0.0,0.0:0.0,3.19142e-06,1.0
+chr1	8835404	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8835449;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:51:0.360317:19,23:19-19,18-23:15,26,0,9:18,3|19,12:4,1|5,1|7,1|8,1|9,1|12,1|13,1|17,1|23,1:389.399:366.612,131.36:0.0,2.07647:0.000589075,0.999415,9.12762e-34	2/0:42:0.679654:22,23:22-23,23-23:17,12,0,13:22,7|23,10:5,2|6,1|7,2|8,1|9,1|17,2|20,1|21,1|22,2:298.777:326.675,113.385:0.495841,0.0:9.49549e-09,0.679662,0.320347
+chr1	8837723	.	AATAAATAAATAAATA	AATA	.	.	END=8837738;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.31628:1,1:1-2,1-2:0,28,0,0:NULL:NULL:273.351:366.612,131.36:0.195027,0.195027:0.705939,0.277012,0.0170776	0/0:21:0.999735:4,4:4-4,4-4:15,4,0,2:4,15:2,1|3,1:108.529:326.675,113.385:0.0,0.0:1e-45,0.000120001,0.99988
+chr1	8840838	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=8840876;RU=ctt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:27:0.974815:12,13:12-13,13-13:13,8,0,6:12,3|13,10:4,2|7,1|9,1|10,1|11,1:181.955:366.612,131.36:0.489073,0.0:6.14641e-24,0.974835,0.0252135	0/0:37:0.997373:13,13:13-13,13-13:12,17,0,8:13,12:4,1|6,1|8,1|9,3|10,1|11,1:258.066:326.675,113.385:0.0,0.0:6.14404e-33,0.00142455,0.99858
+chr1	8848162	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8848191;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.0236259:14,14:14-17,14-17:0,1,0,0:NULL:NULL:9.91206:366.612,131.36:1.32769,1.32769:0.0236151,0.261023,0.715409	0/0:24:0.991418:15,15:13-16,13-16:11,4,0,6:15,11:5,1|6,2|10,1|14,2:136.868:326.675,113.385:0.489474,0.489474:2.55922e-15,0.00317791,0.99683
+chr1	8848195	.	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	GAA,GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA,GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=8848293;RU=gaa;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:2:0.000598994:1,59:1-59,1-59:0,2,0,0:NULL:NULL:18.9572:366.612,131.36:24.6864,23.1134:0.10077,0.561584,0.337791	2/2:23:0.322535:32,32:30-34,30-34:2,9,0,12:32,2:4,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|28,1|30,1|31,1|32,1:189.229:326.675,113.385:0.626507,0.626507:0.539029,0.458295,0.00279247
+chr1	8848386	.	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	.	.	END=8848480;RU=gggaa;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0376241:12,12:7-12,7-12:0,1,0,5:NULL:4,1|5,1|7,1|10,1|11,1:45.0742:366.612,131.36:1.23203,1.23203:1.0,0.0,0.0	0/0:25:0.460313:19,19:18-19,18-19:3,9,0,13:19,3:3,1|5,1|8,1|10,1|11,1|13,1|15,1|17,1|18,5:193.919:326.675,113.385:0.284901,0.284901:1.42522e-06,0.210658,0.789391
+chr1	8850301	.	CATACATACATA	.	.	.	END=8850312;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.048:366.612,131.36:0.0,0.0:0.0,1.75028e-07,1.0	0/0:25:1.00001:3,3:3-3,3-3:20,3,0,2:3,20:2,2:124.456:326.675,113.385:0.0,0.0:0.0,3.10488e-06,1.0
+chr1	8851721	.	AGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAA	.	.	END=8851744;RU=agaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:35:1.0:4,6:4-6,6-6:12,23,0,0:4,4|6,8:NULL:259.097:366.612,131.36:0.339533,0.0:1.20748e-15,1.0,2.89637e-09	0/0:40:0.995531:6,6:5-6,5-6:11,23,0,5:6,11:2,1|4,1|5,3:285.933:326.675,113.385:0.425627,0.425627:3.18763e-21,0.00288447,0.997124
+chr1	8852685	.	GGGTGGGTGGGT	.	.	.	END=8852696;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.350289:3,3:1-3,1-3:2,25,0,0:3,2:NULL:230.69:366.612,131.36:0.687673,0.687673:8.77469e-07,0.40522,0.594852	0/0:28:0.928769:3,3:3-3,3-3:7,21,0,0:3,7:NULL:222.275:326.675,113.385:0.19802,0.19802:3.35873e-21,0.043614,0.956457
+chr1	8856513	.	TATATATATATA	TATATATATA	.	.	END=8856524;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:0.971816:5,6:4-6,6-6:18,18,0,0:4,3|5,5|6,10:NULL:253.14:366.612,131.36:0.613062,0.0:3.13099e-10,0.984218,0.0158172	0/0:17:0.891103:6,6:5-6,5-6:14,3,0,0:5,3|6,11:NULL:92.127:326.675,113.385:0.36513,0.36513:2.12696e-13,0.10786,0.892238
+chr1	8857202	.	GAGAGAGAGAGA	GAGAGAGAGA	.	.	END=8857213;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.00001:5,5:5-5,5-5:23,24,0,2:5,23:4,2:322.378:366.612,131.36:0.0,0.0:1.0,7.08375e-07,0.0	0/0:25:0.999129:6,6:5-6,5-6:13,8,0,3:6,13:5,3:149.8:326.675,113.385:0.419363,0.419363:1.06978e-35,0.000363674,0.999637
+chr1	8860742	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8860779;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.940994:20,20:19-20,19-20:8,23,0,13:20,8:5,2|8,1|10,1|11,1|13,1|14,2|15,1|16,2|17,1|19,1:351.72:366.612,131.36:0.323567,0.323567:2.8294e-23,0.0144076,0.985623	0/1:30:0.996848:19,20:18-19,18-20:11,5,0,14:18,2|19,6|20,3:4,1|5,2|6,2|7,1|9,1|10,2|13,2|14,1|20,2:219.945:326.675,113.385:0.323567,0.363786:2.20948e-23,0.000960826,0.999043
+chr1	8863873	.	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG,CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG,CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	.	.	END=8863991;RU=ctgcctg;PERIOD=7;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:59:0.924128:13,20:10-16,15-23:2,23,1,29:13,2:2,1|5,1|6,2|7,2|8,3|9,6|10,4|11,1|13,4|14,2|15,3:459.505:366.612,131.36:1.67955,2.60763:0.0,1.0,7.78635e-10	2/2:50:0.179105:16,16:14-16,14-16:0,18,0,32:NULL:2,1|3,4|4,1|6,3|7,1|8,5|9,2|10,2|11,4|13,4|14,1|15,2|16,2:378.902:326.675,113.385:0.607763,0.607763:0.385714,0.501196,0.113186
+chr1	8865199	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8865252;RU=tc;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.483501:22,24:22-27,23-27:7,21,0,13:22,3|23,2|24,2:4,1|5,1|6,1|7,2|8,1|9,1|11,2|13,1|14,1|22,1|23,1:336.074:366.612,131.36:1.62732,1.37962:0.997519,0.00248811,6.59812e-10	3/0:39:0.968546:26,27:5-27,5-27:19,8,0,9:25,4|26,6|27,9:5,2|6,1|8,1|12,1|15,1|16,1|22,1|26,1:251.944:326.675,113.385:9.18917,7.11396:2.393e-07,0.974888,0.0251617
+chr1	8865253	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8865286;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.831195:15,17:12-15,12-17:9,17,0,4:12,2|14,2|15,3|17,2:11,1|12,2|13,1:243.725:366.612,131.36:1.06407,1.95794:0.10753,0.892336,0.000235103	0/2:25:0.353293:17,18:17-17,17-18:11,8,0,5:17,11:15,4|18,1:170.877:326.675,113.385:0.0,0.537032:1.58965e-25,3.94925e-08,1.0
+chr1	8865886	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8865933;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.483152:24,24:24-26,24-26:4,13,0,9:24,4:7,1|9,2|14,1|15,1|16,1|20,1|24,2:211.934:366.612,131.36:0.744223,0.744223:1.16041e-19,0.0937735,0.906328	0/0:39:0.590958:24,24:24-25,24-25:16,11,0,12:24,13|25,3:5,1|7,2|12,1|13,3|15,1|17,1|19,1|21,1|23,1:275.553:326.675,113.385:0.481803,0.481803:4.06428e-17,0.000140235,0.999864
+chr1	8866609	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8866646;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.944924:20,20:19-24,19-24:15,14,0,17:19,3|20,12:5,1|6,1|8,1|9,2|10,1|11,2|12,1|14,2|15,1|16,2|17,2|19,1:331.989:366.612,131.36:1.62895,1.62895:8.41321e-30,0.000257595,0.999743	0/1:53:0.898856:19,20:19-19,19-20:19,17,0,16:18,2|19,17:5,2|6,1|9,1|10,1|11,2|12,2|14,2|15,4|20,1:390.696:326.675,113.385:0.0,0.472558:6.33979e-22,2.9656e-07,1.0
+chr1	8868138	.	CAAACCAAACCAAAC	.	.	.	END=8868152;RU=caaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:23,10,0,2:3,23:2,2:199.603:366.612,131.36:0.0,0.0:0.0,5.30068e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:28,22,0,0:3,28:NULL:315.714:326.675,113.385:0.0,0.0:0.0,4.2339e-08,1.0
+chr1	8869124	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8869175;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0181264:22,22:23-26,23-26:0,4,0,0:NULL:NULL:37.1521:366.612,131.36:0.783868,0.783868:0.46442,0.437085,0.0986378	2/2:3:0.029014:23,23:23-26,23-26:0,2,0,0:NULL:NULL:22.634:326.675,113.385:1.2356,1.2356:0.258741,0.506922,0.23435
+chr1	8870489	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8870542;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.492783:22,22:19-22,19-22:4,18,0,12:22,4:5,1|9,3|10,2|12,1|19,1|20,1|21,3:273.202:366.612,131.36:1.40196,1.40196:1.0,0.0,0.0	0/2:27:0.229769:27,39:25-27,26-41:5,8,0,13:26,3|27,2:5,2|6,1|11,1|14,1|18,1|19,2|21,1|22,2|23,1|39,1:209.587:326.675,113.385:1.34486,6.22146:1.87855e-07,0.175017,0.825054
+chr1	8870819	.	TTTTATTTTATTTTA	.	.	.	END=8870833;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:209.892:366.612,131.36:0.0,0.0:0.0,1.69948e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:30,7,0,0:3,30:NULL:183.953:326.675,113.385:0.0,0.0:0.0,4.23064e-09,1.0
+chr1	8881143	.	AAATAAATAAAT	.	.	.	END=8881154;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999663:3,3:3-3,3-3:15,16,0,0:3,15:NULL:202.324:366.612,131.36:0.0,0.0:0.0,0.000200851,0.999803	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.894:326.675,113.385:0.0,0.0:0.0,6.30973e-07,1.0
+chr1	8891081	.	CATGCATGCATG	.	.	.	END=8891092;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.965842:3,3:3-3,3-3:8,7,0,0:3,8:NULL:95.5284:366.612,131.36:0.0,0.0:6.51114e-17,0.0148534,0.985179	0/0:21:0.999769:3,3:3-3,3-3:15,6,0,0:3,15:NULL:121.647:326.675,113.385:0.0,0.0:3.8172e-31,0.000124544,0.999879
+chr1	8894445	.	TTTGTTTGTTTG	.	.	.	END=8894456;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999531:3,3:3-3,3-3:14,9,0,0:3,14:NULL:139.193:366.612,131.36:0.0,0.0:0.0,0.000248745,0.999751	0/0:25:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:123.879:326.675,113.385:0.0,0.0:0.0,3.92141e-06,0.999995
+chr1	8896564	.	TCTTTCTTTCTT	.	.	.	END=8896575;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99997:3,3:3-3,3-3:18,9,0,0:3,18:NULL:151.099:366.612,131.36:0.0,0.0:0.0,2.52087e-05,0.999978	0/0:37:1.0:3,3:3-3,3-3:26,9,0,2:3,26:2,2:200.704:326.675,113.385:0.0,0.0:0.0,3.85101e-08,1.0
+chr1	8896983	.	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTT	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	END=8897012;RU=tttgtt;PERIOD=6;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.993442:4,4:4-4,4-4:11,9,0,2:4,11:2,1|3,1:142.233:366.612,131.36:0.0,0.0:0.997042,0.00296483,4.66393e-27	0/0:43:0.999962:5,5:5-5,5-5:17,20,0,6:5,17:2,3|3,1|4,2:291.268:326.675,113.385:0.0,0.0:1e-45,4.48778e-05,0.999956
+chr1	8902045	.	TCTCCTCTCCTCTCCTCTCC	.	.	.	END=8902064;RU=tctcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:26,18,0,2:4,26:2,1|3,1:285.964:366.612,131.36:0.0,0.0:0.0,1.81415e-07,1.0	0/0:35:1.0:4,4:4-4,4-4:25,6,0,4:4,25:3,4:184.34:326.675,113.385:0.0,0.0:0.0,7.11103e-08,1.0
+chr1	8903368	.	TAAATAAATAAA	.	.	.	END=8903379;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999985:3,3:3-3,3-3:18,13,0,0:3,18:NULL:189.562:366.612,131.36:0.0,0.0:0.0,2.00924e-05,0.99998	0/0:24:0.999722:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.598:326.675,113.385:0.0,0.0:0.0,0.000152183,0.999849
+chr1	8905683	.	TCTCTCTCTCTC	.	.	.	END=8905694;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999972:6,6:6-6,6-6:18,8,0,0:6,18:NULL:146.342:366.612,131.36:0.0,0.0:1.2e-43,1.97853e-05,0.99998	0/0:38:1.00001:6,6:6-6,6-6:22,16,0,0:6,22:NULL:232.951:326.675,113.385:0.0,0.0:0.0,1.45279e-06,1.0
+chr1	8907395	.	CACACACACACA	.	.	.	END=8907406;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:6,6:6-6,6-6:29,28,0,3:6,29:5,3:384.25:366.612,131.36:0.0,0.0:0.0,7.76301e-09,1.0	0/0:23:0.995262:6,6:6-6,6-6:11,12,0,0:6,11:NULL:159.469:326.675,113.385:0.0,0.0:9.17521e-26,0.00274876,0.99726
+chr1	8909209	.	TATACATATACATATACATATACATATACATATACATATACATATACA	TATACATATACATATACATATACATATACA,TATACATATACATATACATATACATATACATATACATATACA	.	.	END=8909256;RU=tataca;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.70847:5,7:5-7,7-7:13,9,0,6:5,2|7,11:4,2|5,1|6,3:187.788:366.612,131.36:0.996022,0.0:0.999782,0.000218416,2.55627e-25	0/0:19:0.868755:8,8:8-11,8-11:7,8,0,3:8,7:3,2|6,1:123.592:326.675,113.385:1.47322,1.47322:1.3311e-16,0.0746377,0.925456
+chr1	8909266	.	AGAGAGAGAGAGAG	.	.	.	END=8909279;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999991:7,7:7-7,7-7:19,5,0,0:7,19:NULL:121.83:366.612,131.36:0.0,0.0:3.2e-44,1.76356e-05,0.999986	0/0:16:0.865302:7,7:7-7,7-7:7,9,0,0:7,7:NULL:109.484:326.675,113.385:0.0,0.0:1.3106e-16,0.077319,0.922778
+chr1	8909506	.	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA,CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	.	.	END=8909589;RU=catcta;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.398597:13,15:13-13,13-16:8,15,0,22:13,8:3,5|4,2|5,2|6,2|7,3|8,1|10,3|12,3|15,1:332.842:366.612,131.36:0.0,1.12637:1.09292e-06,1.0,6.81827e-15	0/0:34:0.83448:14,14:14-14,14-14:5,10,0,19:14,5:3,2|5,3|6,1|7,1|8,2|9,1|11,1|12,3|13,5:241.438:326.675,113.385:0.0990099,0.0990099:2.26933e-10,0.0688562,0.931239
+chr1	8912340	.	ATTTATTTATTT	.	.	.	END=8912351;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.99996:3,3:3-3,3-3:17,21,0,0:3,17:NULL:253.744:366.612,131.36:0.0,0.0:0.0,4.85428e-05,0.999955	0/0:24:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.168:326.675,113.385:0.0,0.0:0.0,3.28267e-06,1.0
+chr1	8917312	.	GTTTGTTTGTTT	.	.	.	END=8917323;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:266.186:366.612,131.36:0.0,0.0:0.0,3.14481e-07,1.0	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.076:326.675,113.385:0.0,0.0:0.0,6.01145e-06,0.999995
+chr1	8917711	.	TTTGTTTGTTTGTTTG	.	.	.	END=8917726;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:4,4:4-4,4-4:22,18,0,0:4,22:NULL:258.297:366.612,131.36:0.0,0.0:0.0,3.57385e-06,1.0	0/0:39:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:240.042:326.675,113.385:0.0,0.0:0.0,7.93477e-07,1.0
+chr1	8926905	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=8926964;RU=tttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.638773:10,10:10-10,10-10:4,6,0,2:10,4:3,2:84.7246:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:22:0.527139:15,15:8-15,8-15:4,7,0,9:15,4:2,1|3,1|4,1|5,1|7,1|11,2|12,1|14,1:152.15:326.675,113.385:3.13625,3.13625:2.44555e-09,0.341895,0.658126
+chr1	8927634	.	CTCTCTCTCTCTCTCT	CTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8927649;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.0520976:4,26:1-15,4-27:0,14,0,2:NULL:15,1|26,1:148.603:366.612,131.36:4.1245,7.9309:4.7329e-14,0.622097,0.377956	0/0:52:0.999995:8,8:8-8,8-8:28,18,0,6:7,2|8,26:4,1|6,2|7,3:336.47:326.675,113.385:0.0,0.0:2.082e-42,6.42184e-06,0.999995
+chr1	8928347	.	AAACAAACAAACAAAC	.	.	.	END=8928362;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.165297:4,4:4-7,4-7:0,20,0,0:NULL:NULL:193.107:366.612,131.36:1.38465,1.38465:0.0,0.0,1.0	0/0:28:0.999279:4,4:4-4,4-4:14,14,0,0:4,14:NULL:181.16:326.675,113.385:0.0,0.0:0.0,0.000534942,0.999469
+chr1	8931732	.	TTTGTTTGTTTGTTTG	.	.	.	END=8931747;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999978:4,4:4-4,4-4:19,16,0,0:4,19:NULL:221.065:366.612,131.36:0.0,0.0:0.0,3.19381e-05,0.999971	0/0:16:0.995511:4,4:4-4,4-4:11,3,0,2:4,11:2,1|3,1:84.3862:326.675,113.385:0.0,0.0:3.83811e-36,0.00198111,0.998026
+chr1	8932575	.	TTTATTTATTTATTTA	.	.	.	END=8932590;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:275.257:366.612,131.36:0.0,0.0:0.0,1.20957e-07,1.0	0/0:28:0.99834:4,4:4-4,4-4:13,15,0,0:4,13:NULL:182.651:326.675,113.385:0.0,0.0:2.88158e-36,0.00128161,0.998724
+chr1	8937294	.	GAGGCAGAGGCAGAGGCA	GAGGCAGAGGCA	.	.	END=8937311;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999806:2,2:2-2,2-2:15,19,0,0:2,15:NULL:228.073:366.612,131.36:0.0,0.0:0.999911,8.97412e-05,0.0	0/0:18:0.999731:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.413:326.675,113.385:0.0,0.0:8.13e-43,0.000145271,0.999857
+chr1	8942569	.	TCTTTCTTTCTTTCTT	.	.	.	END=8942584;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.991117:4,4:4-4,4-4:10,11,0,4:4,10:2,1|3,3:164.949:366.612,131.36:0.0,0.0:9.58098e-29,0.0041009,0.995908	0/0:17:0.99744:4,4:4-4,4-4:12,5,0,0:4,12:NULL:92.7736:326.675,113.385:0.0,0.0:6.66647e-35,0.00157776,0.998428
+chr1	8943948	.	GTTTTTGTTTTTGTTTTT	.	.	.	END=8943965;RU=gttttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:263.669:366.612,131.36:0.0,0.0:0.0,2.36322e-07,1.0	0/0:18:0.998791:3,3:3-3,3-3:13,5,0,0:3,13:NULL:96.9382:326.675,113.385:0.0,0.0:5.3e-44,0.000689368,0.999316
+chr1	8944123	.	GTTGGTTGGTTGGTTGGTTG	GTTGGTTGGTTGGTTG	.	.	END=8944142;RU=gttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.166411:4,4:1-4,1-4:0,20,0,4:NULL:4,4:207.832:366.612,131.36:0.699545,0.699545:0.272568,0.516949,0.210488	0/0:40:1.0:5,5:5-5,5-5:25,8,0,7:5,25:3,2|4,5:221.734:326.675,113.385:0.0,0.0:0.0,7.72888e-08,1.0
+chr1	8945703	.	ACACACACACACACAC	ACACACACACACACACACAC	.	.	END=8945718;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.99884:10,10:9-10,9-10:24,17,0,4:9,3|10,21:6,1|9,2|10,1:305.1:366.612,131.36:0.309,0.309:0.0,8.1627e-08,1.0	0/0:27:0.99982:8,8:8-8,8-8:16,5,0,6:8,16:5,1|6,3|7,2:154.178:326.675,113.385:0.0,0.0:2.7511e-30,5.01359e-05,0.999949
+chr1	8946213	.	ACACACACACACACACACACAC	ACACACACAC,ACACACACACACACAC	.	.	END=8946234;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:59:1.0:5,8:5-5,8-8:35,18,0,4:5,23|8,12:6,2|7,2:359.627:366.612,131.36:0.0,0.0:1.0,1.40569e-24,0.0	0/0:32:0.993926:11,11:10-11,10-11:20,6,0,5:10,2|11,18:4,1|5,1|9,1|10,2:180.137:326.675,113.385:0.398753,0.398753:2.41738e-26,0.00609946,0.993917
+chr1	8949155	.	ATTTATTTATTT	.	.	.	END=8949166;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999956:3,3:3-3,3-3:16,28,0,2:3,16:2,2:345.392:366.612,131.36:0.0,0.0:0.0,4.12694e-05,0.999963	0/0:18:0.999001:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.5095:326.675,113.385:0.0,0.0:2.07056e-40,0.000524939,0.999477
+chr1	8954485	.	AATAAATAAATAAATA	.	.	.	END=8954500;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.339876:4,4:1-4,1-4:4,24,0,0:4,4:NULL:256.281:366.612,131.36:1.28766,1.28766:9.34563e-13,0.589488,0.410587	0/0:21:0.995693:4,4:4-4,4-4:11,8,0,2:4,11:3,2:132.213:326.675,113.385:0.0,0.0:2.8702e-33,0.00223349,0.997775
+chr1	8957579	.	AAACAAACAAAC	.	.	.	END=8957590;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.998328:3,3:3-3,3-3:12,20,0,0:3,12:NULL:230.836:366.612,131.36:0.0,0.0:1.85379e-37,0.00112181,0.998883	0/0:25:0.999946:3,3:3-3,3-3:17,6,0,2:3,17:2,2:133.668:326.675,113.385:0.0,0.0:0.0,2.2052e-05,0.999979
+chr1	8962592	.	TTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=8962619;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:7,7:7-8,7-8:22,2,0,3:7,22:3,1|5,1|6,1:130.768:366.612,131.36:0.298675,0.298675:0.0,8.84921e-07,1.0	0/0:22:0.991848:7,7:7-8,7-8:10,7,0,4:7,10:5,2|6,2:139.12:326.675,113.385:0.452422,0.452422:1.87179e-23,0.0030756,0.996935
+chr1	8966427	.	AATGAATGAATGAATG	.	.	.	END=8966442;RU=aatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:34,15,0,3:4,34:3,3:294.258:366.612,131.36:0.0,0.0:0.0,2.03031e-10,1.0	0/0:28:0.999909:4,4:4-4,4-4:16,8,0,4:4,16:3,4:164.559:326.675,113.385:0.0,0.0:0.0,3.99346e-05,0.999963
+chr1	8967541	.	AAAACAAAACAAAACAAAACAAAAC	AAAAC	.	.	END=8967565;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.030121:1,1:1-2,1-2:0,10,0,0:NULL:NULL:91.174:366.612,131.36:0.553571,0.553571:0.292457,0.527873,0.179681	0/0:18:0.991041:5,5:5-5,5-5:10,6,0,2:5,10:4,2:114.147:326.675,113.385:0.0,0.0:2.27669e-34,0.00402819,0.995983
+chr1	8969212	.	CTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8969235;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.315118:15,15:15-16,15-16:3,2,0,0:15,3:NULL:33.7344:366.612,131.36:0.539944,0.539944:0.0,0.0,1.0	0/0:11:0.660708:12,12:12-13,12-13:5,1,0,4:12,5:6,1|7,1|9,1|10,1:61.3337:326.675,113.385:0.345543,0.345543:4.09213e-05,0.150859,0.849184
+chr1	8969424	.	TATATATATATATATATATATATATATATATATATATATA	TATATATATATATA	.	.	END=8969463;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00330237:7,7:1-7,1-7:0,6,0,0:NULL:NULL:59.7665:366.612,131.36:2.0456,2.0456:0.449076,0.48442,0.066672	0/0:6:0.174936:20,20:18-20,18-20:2,2,0,0:20,2:NULL:27.3013:326.675,113.385:0.744881,0.744881:0.00757335,0.50548,0.487012
+chr1	8969463	.	AGAGAGAGAGAGAGAGAGAGAGAG	AG	.	.	END=8969486;RU=ag;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00373898:1,1:1-8,1-8:0,6,0,0:NULL:NULL:60.4272:366.612,131.36:1.77987,1.77987:0.244967,0.559202,0.195847	0/0:14:0.922272:12,12:12-12,12-12:7,4,0,3:12,7:7,1|10,1|11,1:88.785:326.675,113.385:0.0,0.0:6.57346e-13,0.027556,0.972496
+chr1	8974355	.	CATCATCATCAT	CATCATCATCATCATCAT	.	.	END=8974366;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.000355263:6,6:6-6,6-6:0,1,0,0:NULL:NULL:10.2861:366.612,131.36:0.0,0.0:0.00265944,0.115218,0.882229	0/0:47:1.0:4,4:4-4,4-4:24,23,0,0:4,24:NULL:300.522:326.675,113.385:0.0,0.0:0.0,8.12535e-07,1.0
+chr1	8976339	.	TTATTATTATTA	TTATTATTATTATTA	.	.	END=8976350;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.838289:5,5:5-5,5-5:6,16,0,0:5,6:NULL:172.039:366.612,131.36:0.19802,0.19802:1.00381e-25,0.0844077,0.91569	0/0:35:0.999996:4,4:4-5,4-5:20,14,0,0:4,20:NULL:213.92:326.675,113.385:0.431574,0.431574:0.0,1.74031e-05,0.999986
+chr1	8976507	.	CCCACCCACCCA	.	.	.	END=8976518;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999913:3,3:3-3,3-3:16,12,0,0:3,16:NULL:177.625:366.612,131.36:0.0,0.0:0.0,5.45229e-05,0.999948	0/0:60:1.0:3,3:3-3,3-3:37,21,0,2:3,37:2,2:353.756:326.675,113.385:0.0,0.0:0.0,5.56012e-11,1.0
+chr1	8977413	.	AGGAGGAGGAGG	.	.	.	END=8977424;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:22,14,0,0:4,22:NULL:211.443:366.612,131.36:0.0,0.0:0.0,1.70713e-06,1.0	0/0:38:0.999979:4,4:4-4,4-4:18,18,0,2:4,18:3,2:251.578:326.675,113.385:0.0,0.0:0.0,1.51235e-05,0.999986
+chr1	8978639	.	AAAATTAAAATTAAAATT	AAAATT	.	.	END=8978656;RU=aaaatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:0.999948:3,3:3-3,3-3:17,12,0,0:3,17:NULL:178.649:326.675,113.385:0.0,0.0:0.0,4.79368e-05,0.999955
+chr1	8992158	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=8992189;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999219:8,8:7-8,7-8:13,14,0,11:8,13:2,2|4,3|5,3|7,3:262.314:366.612,131.36:0.311527,0.311527:1.92324e-35,0.000353678,0.999651	0/0:41:0.997771:8,8:8-8,8-8:12,21,0,8:8,12:3,1|4,1|6,4|7,2:299.467:326.675,113.385:0.0,0.0:4.40686e-32,0.00147235,0.998534
+chr1	8996946	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8996997;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.443872:26,26:24-31,24-31:4,15,0,9:26,4:5,2|13,2|17,1|18,1|20,1|23,1|24,1:225.953:366.612,131.36:2.41178,2.41178:8.45751e-06,0.180153,0.819909	1/2:18:0.250404:25,28:25-28,25-28:2,5,0,9:25,2:9,1|15,3|16,1|17,1|19,1|25,1|28,1:129.107:326.675,113.385:0.807523,0.960549:6.73269e-08,0.946104,0.053981
+chr1	8997017	.	TTTCTTTCTTTC	.	.	.	END=8997028;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999753:3,3:3-3,3-3:15,14,0,0:3,15:NULL:183.878:366.612,131.36:0.0,0.0:0.0,0.00015218,0.999849	0/0:18:0.999859:3,3:3-3,3-3:16,2,0,0:3,16:NULL:80.5162:326.675,113.385:0.0,0.0:0.0,6.20326e-05,0.999941
+chr1	9000049	.	ATGATGATGATG	.	.	.	END=9000060;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:35,14,0,3:4,35:3,3:288.249:366.612,131.36:0.0,0.0:0.0,7.66698e-11,1.0	0/0:41:1.0:4,4:4-4,4-4:24,15,0,2:4,24:3,2:250.432:326.675,113.385:0.0,0.0:0.0,4.66483e-07,1.0
+chr1	9000143	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=9000170;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:6,6:6-6,6-6:29,20,0,2:6,29:3,2:318.407:366.612,131.36:0.0,0.0:1.0,5.87949e-09,0.0	0/0:48:1.0:7,7:7-7,7-7:24,13,0,11:7,24:2,2|4,3|5,2|6,4:298.135:326.675,113.385:0.0,0.0:0.0,1.88854e-07,1.0
+chr1	9003159	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9003188;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0294368:12,12:12-18,12-18:0,7,0,2:NULL:6,1|12,1:79.4565:366.612,131.36:1.34033,1.34033:0.235741,0.502044,0.26226	0/0:19:0.9442:15,15:14-15,14-15:8,5,0,5:15,8:5,1|9,2|10,1|11,1:120.392:326.675,113.385:0.195027,0.195027:3.1254e-15,0.0284693,0.971582
+chr1	9003186	.	TCTATCTATCTATCTA	.	.	.	END=9003201;RU=tcta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.338585:4,4:1-4,1-4:3,6,0,0:4,3:NULL:67.7316:366.612,131.36:0.645921,0.645921:0.000190663,0.405217,0.594663	0/0:13:0.986866:4,4:4-4,4-4:10,3,0,0:4,10:NULL:68.9658:326.675,113.385:0.0,0.0:3.03064e-13,0.00828464,0.991734
+chr1	9007831	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9007856;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.468166:26,26:25-26,25-26:4,14,0,4:26,4:10,1|15,1|16,1|23,1:181.784:366.612,131.36:0.539944,0.539944:0.0,0.0,1.0	0/0:33:0.858364:13,13:12-14,12-14:21,8,0,4:12,5|13,14|14,2:9,1|11,2|12,1:214.993:326.675,113.385:0.560784,0.560784:4.82571e-17,0.137341,0.862749
+chr1	9008428	.	TATTTATTTATT	.	.	.	END=9008439;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:196.612:366.612,131.36:0.0,0.0:0.0,2.74101e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:193.865:326.675,113.385:0.0,0.0:0.0,2.09592e-07,1.0
+chr1	9010782	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATAT,ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9010839;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0877655:3,3:1-4,1-4:0,6,0,0:NULL:NULL:54.7806:366.612,131.36:1.06139,1.06139:1.0,0.0,0.0	2/2:6:0.0249467:22,22:22-25,22-25:0,3,0,2:NULL:5,1|19,1:40.9669:326.675,113.385:1.44541,1.44541:1.0,0.0,0.0
+chr1	9010840	.	ACACACACACACACAC	ACAC	.	.	END=9010855;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00198465:2,2:2-14,2-14:0,6,0,0:NULL:NULL:55.5589:366.612,131.36:5.27203,5.27203:0.0549711,0.404721,0.54048	0/0:5:0.392876:8,8:8-8,8-8:3,2,0,0:8,3:NULL:29.0822:326.675,113.385:0.0,0.0:3.84704e-09,0.321237,0.678776
+chr1	9012172	.	TATATATATATATATATATA	TATATATA	.	.	END=9012191;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00232879:4,4:1-7,1-7:0,6,0,0:NULL:NULL:53.2959:366.612,131.36:1.41352,1.41352:0.142922,0.527029,0.330191	0/0:14:0.886758:10,10:9-10,9-10:7,6,0,0:10,7:NULL:84.391:326.675,113.385:0.398507,0.398507:3.0459e-08,0.0742848,0.925809
+chr1	9015094	.	AAAGAAAGAAAG	.	.	.	END=9015105;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.988736:3,3:3-3,3-3:10,7,0,0:3,10:NULL:108.484:366.612,131.36:0.0,0.0:1.22412e-30,0.00610427,0.99391	0/0:35:0.99985:3,3:3-3,3-3:16,19,0,0:3,16:NULL:229.756:326.675,113.385:0.0,0.0:0.0,0.000113049,0.999888
+chr1	9015582	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9015617;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:48:0.879977:11,12:11-11,11-12:24,18,0,6:10,4|11,20:5,2|7,1|8,2|12,1:332.225:366.612,131.36:0.0,0.537944:1.0,0.0,0.0	0/0:42:0.840554:18,18:11-18,11-18:10,15,0,15:17,2|18,8:5,3|8,1|10,1|12,2|13,2|15,3|16,1|17,1|18,1:307.155:326.675,113.385:2.7477,2.7477:7.32886e-17,0.147725,0.852355
+chr1	9020212	.	GAATGAATGAATGAATGAATGAAT	GAATGAATGAAT,GAATGAATGAATGAAT	.	.	END=9020235;RU=gaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.946082:3,4:2-3,2-4:8,14,0,2:3,5|4,3:3,2:183.765:366.612,131.36:0.275098,0.776833:0.999713,0.000286357,8.49709e-27	0/0:23:0.999425:6,6:6-6,6-6:15,8,0,0:6,15:NULL:135.366:326.675,113.385:0.0,0.0:1.88457e-16,0.000431303,0.999569
+chr1	9021852	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9021905;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0340543:30,30:26-30,26-30:0,7,0,6:NULL:5,1|8,1|9,1|10,1|22,1|26,1:110.405:366.612,131.36:1.08568,1.08568:0.0470722,0.36094,0.592117	1/1:20:0.0477433:26,26:26-27,26-27:0,7,0,11:NULL:8,1|10,1|12,1|13,1|14,1|15,1|16,1|24,2|26,2:156.553:326.675,113.385:0.534653,0.534653:0.0916676,0.439076,0.469425
+chr1	9022665	.	TGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=9022689;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.149837:9,9:6-9,6-9:2,14,0,4:9,2:3,2|5,2:165.398:366.612,131.36:1.43267,1.43267:0.0,0.0,1.0	0/0:36:1.0:5,5:5-5,5-5:26,6,0,4:5,26:2,1|3,2|4,1:189.236:326.675,113.385:0.0,0.0:0.0,6.84067e-08,1.0
+chr1	9025967	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9026010;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.293938:25,25:25-26,25-26:3,10,0,8:25,3:7,1|8,1|11,1|13,1|15,1|20,1|21,1|24,1:172.892:366.612,131.36:0.590584,0.590584:0.0,0.0,1.0	0/0:31:0.84528:22,22:8-23,8-23:7,8,0,11:22,7:5,1|7,1|8,1|9,1|11,1|13,1|14,1|18,2|19,2:191.718:326.675,113.385:4.31912,4.31912:4.1625e-08,0.0753746,0.924719
+chr1	9027019	.	TTTATTTATTTA	TTTATTTATTTATTTA	.	.	END=9027030;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999559:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.767:366.612,131.36:0.0,0.0:1e-45,0.000217421,0.999787	0/0:17:0.985866:3,3:3-3,3-3:9,6,0,2:3,9:2,2:101.237:326.675,113.385:0.0,0.0:1.1158e-20,0.00535034,0.994663
+chr1	9029369	.	ATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9029380;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:3:0.000321662:27,57:14-77,14-76:0,3,0,0:NULL:NULL:26.0914:366.612,131.36:24.3716,23.0378:0.00111219,0.0825436,0.916443	0/0:31:0.994092:6,6:4-7,4-7:19,10,0,0:6,17|7,2:NULL:171.876:326.675,113.385:0.397522,0.397522:1.02527e-22,4.64167e-05,0.999956
+chr1	9029380	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9029417;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.216645:17,17:16-17,16-17:2,2,0,3:17,2:7,1|9,1|10,1:49.2363:366.612,131.36:0.607279,0.607279:0.765264,0.234492,0.000271143	0/0:46:0.977209:19,19:17-20,17-20:18,16,0,11:19,16|20,2:5,2|9,2|10,1|13,1|16,1|17,1|18,2|19,1:315.247:326.675,113.385:0.483833,0.483833:1.89571e-33,1.92268e-05,0.99998
+chr1	9029844	.	CAACAACAACAACAA	CAACAACAACAA	.	.	END=9029858;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.0:4,4:4-4,4-4:23,8,0,0:4,23:NULL:165.026:366.612,131.36:0.0,0.0:1.0,4.87866e-07,0.0	0/0:40:1.0:5,5:5-5,5-5:23,13,0,4:5,23:3,1|4,3:240.983:326.675,113.385:0.0,0.0:0.0,3.9763e-07,1.0
+chr1	9036620	.	TTGCTTGCTTGC	.	.	.	END=9036631;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:258.932:366.612,131.36:0.0,0.0:0.0,2.43865e-07,1.0	0/0:31:0.999979:3,3:3-3,3-3:18,11,0,2:3,18:2,2:189.103:326.675,113.385:0.0,0.0:0.0,1.8714e-05,0.999985
+chr1	9037227	.	TTGTTTGTTTGT	.	.	.	END=9037238;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.987905:3,3:3-3,3-3:10,26,0,0:3,10:NULL:281.733:366.612,131.36:0.0,0.0:6.40431e-34,0.00634645,0.993669	0/0:25:0.999784:3,3:3-3,3-3:15,8,0,2:3,15:2,2:141.515:326.675,113.385:0.0,0.0:0.0,9.43857e-05,0.999909
+chr1	9044406	.	TATATATATATA	.	.	.	END=9044417;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999311:6,6:6-6,6-6:14,14,0,0:6,14:NULL:185.079:366.612,131.36:0.0,0.0:6.79552e-31,0.000474014,0.999529	0/0:24:0.957473:6,6:6-6,6-6:9,15,0,0:6,9:NULL:171.372:326.675,113.385:0.0,0.0:1.20608e-19,0.0299865,0.970067
+chr1	9044826	.	CTTTTCTTTTCTTTTCTTTT	CTTTT	.	.	END=9044845;RU=ctttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:30:0.999993:4,4:4-4,4-4:19,9,0,2:4,19:3,2:174.322:326.675,113.385:0.0,0.0:0.0,1.1877e-05,0.999987
+chr1	9051415	.	TTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=9051434;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0162539:1,1:1-2,1-2:0,9,0,0:NULL:NULL:76.295:366.612,131.36:0.465241,0.465241:0.194826,0.531917,0.273329	0/0:40:1.0:5,5:5-5,5-5:30,10,0,0:5,30:NULL:213.903:326.675,113.385:0.0,0.0:0.0,7.71664e-09,1.0
+chr1	9052040	.	ATATATATATATAT	ATATATATATAT	.	.	END=9052053;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998463:6,6:6-6,6-6:13,23,0,0:6,13:NULL:267.562:366.612,131.36:0.0,0.0:0.999553,0.000449969,6.37458e-27	0/0:14:0.974584:7,7:7-7,7-7:9,5,0,0:7,9:NULL:79.1573:326.675,113.385:0.0,0.0:2.30478e-15,0.0141506,0.985881
+chr1	9054350	.	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	.	.	END=9054388;RU=gtg;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:0.999893:11,11:11-11,11-11:18,30,0,12:11,18:4,2|5,1|6,1|7,1|8,4|10,3:444.343:366.612,131.36:0.0990099,0.0990099:0.999963,4.02213e-05,2.23574e-35	0/0:43:0.97978:13,13:12-13,12-13:17,17,0,9:12,2|13,15:3,2|4,2|5,1|6,1|8,1|9,2:304.92:326.675,113.385:0.334882,0.334882:9.55963e-30,0.0202098,0.979833
+chr1	9055550	.	GAGAGAGAGAGA	.	.	.	END=9055561;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999743:6,6:6-6,6-6:15,12,0,0:6,15:NULL:169.215:366.612,131.36:0.0,0.0:1.53773e-33,0.0001457,0.999857	0/0:23:0.999908:6,6:6-6,6-6:17,6,0,0:6,17:NULL:124.175:326.675,113.385:0.0,0.0:2.18165e-37,5.48361e-05,0.999948
+chr1	9057035	.	ACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9057070;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.697452:25,25:25-25,25-25:5,15,0,7:25,5:10,1|12,1|13,2|14,1|16,1|23,1:220.418:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:36:0.897055:18,18:17-18,17-18:12,10,0,14:17,3|18,9:5,2|7,1|8,1|9,1|10,2|11,1|13,2|14,1|15,1|16,1|17,1:260.454:326.675,113.385:0.345543,0.345543:3.99221e-10,0.0980294,0.902074
+chr1	9065820	.	ACCCACCCACCC	.	.	.	END=9065831;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.721236:3,3:1-3,1-3:5,20,0,0:3,5:NULL:206.575:366.612,131.36:0.647134,0.647134:1.95027e-15,0.215081,0.784963	0/0:30:0.977326:3,3:3-3,3-3:9,21,0,0:3,9:NULL:225.439:326.675,113.385:0.0,0.0:8.67199e-27,0.0162112,0.983822
+chr1	9066850	.	TTGTTGTTGTTG	.	.	.	END=9066861;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999984:4,4:4-4,4-4:18,12,0,0:4,18:NULL:188.271:366.612,131.36:0.0,0.0:0.0,2.54679e-05,0.999978	0/0:34:0.99999:4,4:4-4,4-4:18,13,0,3:4,18:3,3:216.888:326.675,113.385:0.0,0.0:0.0,1.61757e-05,0.999986
+chr1	9077038	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=9077077;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.290493:11,15:11-11,11-16:14,10,0,10:10,2|11,12:6,2|7,2|8,2|9,1|11,1|12,1|14,1:248.852:366.612,131.36:0.0,1.72902:1.0,0.0,0.0	3/0:41:0.992087:19,20:19-22,20-20:15,9,0,16:19,7|20,8:4,2|5,2|10,2|11,1|13,1|14,2|16,2|17,1|18,2|19,1:283.071:326.675,113.385:0.914864,0.19802:3.63782e-08,0.992064,0.0079529
+chr1	9080272	.	AAAGGAAAAGGAAAAGGA	.	.	.	END=9080289;RU=aaagga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:206.352:366.612,131.36:0.0,0.0:0.0,5.27149e-06,0.999995	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:167.245:326.675,113.385:0.0,0.0:0.0,1.10308e-07,1.0
+chr1	9093163	.	CAACAACAACAA	.	.	.	END=9093174;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:27,10,0,0:4,27:NULL:201.787:366.612,131.36:0.0,0.0:0.0,6.24979e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:23,7,0,2:4,23:3,2:169.731:326.675,113.385:0.0,0.0:0.0,4.45989e-07,1.0
+chr1	9101067	.	TAAATAAATAAA	.	.	.	END=9101078;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:26,18,0,2:3,26:2,2:283.387:366.612,131.36:0.0,0.0:0.0,6.84041e-08,1.0	0/0:33:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:202.305:326.675,113.385:0.0,0.0:0.0,1.23536e-05,0.999987
+chr1	9101909	.	GATGGATGGATGGATGGATGGATGGATGGATGGATGGATG	.	.	.	END=9101948;RU=gatg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.909487:10,10:10-10,10-10:7,11,0,2:10,7:5,1|8,1:150.22:366.612,131.36:0.0,0.0:1.72265e-19,0.06029,0.9398	0/0:37:0.999347:10,10:6-10,6-10:14,12,0,10:10,14:4,3|5,2|6,1|8,2|9,2:243.867:326.675,113.385:1.80969,1.80969:3.52163e-38,0.00031278,0.999689
+chr1	9101975	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	END=9102022;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.998561:11,11:10-11,10-11:13,13,0,12:11,13:4,1|6,2|8,1|9,2|10,6:266.263:366.612,131.36:0.323567,0.323567:0.999219,0.000782351,4.25651e-20	0/0:43:0.999885:12,12:12-12,12-12:17,13,0,12:12,17:2,1|3,1|4,2|5,1|6,1|7,2|8,2|11,2:282.169:326.675,113.385:0.139319,0.139319:1.82656e-35,6.6536e-05,0.999934
+chr1	9103931	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9103958;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.848607:19,19:17-20,17-20:14,13,0,15:19,12|20,2:5,1|7,2|8,1|9,1|13,1|14,1|15,2|16,4|18,2:305.51:366.612,131.36:0.586587,0.586587:0.0,0.0,1.0	0/0:33:0.9842:14,14:12-14,12-14:10,10,0,12:14,10:4,1|5,4|6,4|9,1|11,1|13,1:235.664:326.675,113.385:0.765392,0.765392:4.05923e-13,0.0066438,0.99337
+chr1	9104117	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=9104156;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.99989:9,9:9-9,9-9:16,11,0,7:9,16:2,1|3,1|4,1|5,1|7,1|8,2:220.223:366.612,131.36:0.0,0.0:0.0,2.07957e-05,0.999979	0/0:37:0.999927:8,8:8-8,8-8:17,14,0,6:8,17:3,3|4,2|6,1:241.36:326.675,113.385:0.0,0.0:0.0,6.51563e-05,0.999934
+chr1	9108162	.	AATCAATCAATCAATC	.	.	.	END=9108177;RU=aatc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:179.28:366.612,131.36:0.0,0.0:0.0,7.04389e-06,0.999994	0/0:41:1.00001:4,4:4-4,4-4:22,14,0,5:4,22:2,1|3,4:248.72:326.675,113.385:0.0,0.0:0.0,9.11744e-07,1.0
+chr1	9118041	.	TTTATTTATTTA	.	.	.	END=9118052;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.997525:3,3:3-3,3-3:13,17,0,0:3,13:NULL:208.579:366.612,131.36:0.0,0.0:3.4895e-41,0.00174604,0.998261	0/0:23:1.0:3,3:3-3,3-3:19,2,0,2:3,19:2,2:106.128:326.675,113.385:0.0,0.0:0.0,5.02187e-06,0.999995
+chr1	9118141	.	CCCACCCACCCACCCACCCACCCA	.	.	.	END=9118164;RU=ccca;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.964596:6,6:6-6,6-6:8,10,0,4:6,8:3,1|4,1|5,2:153.156:366.612,131.36:0.0,0.0:1.70703e-22,0.0190878,0.980953	0/0:19:0.969243:6,6:6-6,6-6:8,4,0,7:6,8:2,1|3,3|5,3:117.826:326.675,113.385:0.0,0.0:7.17771e-23,0.0105606,0.989462
+chr1	9127223	.	TATATATATATATATA	.	.	.	END=9127238;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999925:8,8:8-8,8-8:18,9,0,0:8,18:NULL:156.836:366.612,131.36:0.0990099,0.0990099:1.19149e-23,4.76761e-05,0.999955	0/0:22:0.66523:8,8:8-8,8-8:5,17,0,0:8,5:NULL:181.379:326.675,113.385:0.0,0.0:3.98815e-07,0.190437,0.809619
+chr1	9130256	.	CATCATCATCATCAT	.	.	.	END=9130270;RU=cat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999986:5,5:5-5,5-5:18,11,0,0:5,18:NULL:173.323:366.612,131.36:0.0,0.0:0.0,2.12812e-05,0.999979	0/0:43:1.0:5,5:5-5,5-5:25,14,0,4:5,25:3,1|4,3:257.681:326.675,113.385:0.0,0.0:0.0,6.90025e-08,1.0
+chr1	9131824	.	TAAATAAATAAA	.	.	.	END=9131835;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999531:3,3:3-3,3-3:14,15,0,0:3,14:NULL:188.824:366.612,131.36:0.0,0.0:0.0,0.000294935,0.999706	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.923:326.675,113.385:0.0,0.0:0.0,3.12728e-06,1.0
+chr1	9133465	.	AAGCAAGCAAGC	AAGCAAGC	.	.	END=9133476;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999676:2,2:2-2,2-2:15,10,0,0:2,15:NULL:151.462:366.612,131.36:0.0,0.0:0.999812,0.000188883,2.7e-43	0/0:32:0.999907:3,3:3-3,3-3:17,15,0,0:3,17:NULL:200.299:326.675,113.385:0.0,0.0:0.0,6.32466e-05,0.99994
+chr1	9142553	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9142586;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0344154:35,35:4-38,4-38:0,11,0,9:NULL:14,1|18,2|22,1|23,1|32,2|35,2:177.59:366.612,131.36:8.20969,8.20969:0.0,0.0698149,0.930281	0/0:40:0.325667:17,17:16-20,16-20:25,6,0,8:16,6|17,19:5,1|6,1|7,1|10,1|11,1|12,1|15,1|20,1:259.707:326.675,113.385:1.49914,1.49914:9.32892e-22,0.0031623,0.996845
+chr1	9143268	.	AATAAATAAATA	.	.	.	END=9143279;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.988991:3,3:3-3,3-3:10,13,0,0:3,10:NULL:156.669:366.612,131.36:0.0,0.0:1.49166e-29,0.00640972,0.993603	0/0:40:1.0:3,3:3-3,3-3:19,17,0,4:3,19:2,4:255.414:326.675,113.385:0.0,0.0:0.0,6.32514e-06,0.999994
+chr1	9154316	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9154355;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.88495:17,17:16-18,16-18:19,19,0,9:16,5|17,12|18,2:6,2|7,1|8,1|9,1|11,1|12,1|14,1|17,1:345.099:366.612,131.36:0.575792,0.575792:0.999988,1.14857e-05,1.63775e-36	0/2:35:0.272305:20,37:20-20,19-39:15,8,0,11:19,2|20,13:7,1|10,2|12,2|14,1|15,1|17,1|19,2|36,1:242.669:326.675,113.385:0.0990099,8.55464:2.43813e-16,1.05788e-05,0.999993
+chr1	9155619	.	ATAAATAAATAA	.	.	.	END=9155630;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999851:3,3:3-3,3-3:16,12,0,0:3,16:NULL:169.846:366.612,131.36:0.0,0.0:1.05e-43,8.45388e-05,0.999918	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:138.642:326.675,113.385:0.0,0.0:0.0,4.30834e-06,0.999995
+chr1	9156170	.	TTTGTTTGTTTG	.	.	.	END=9156181;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999834:3,3:2-3,2-3:16,5,0,0:3,16:NULL:107.347:366.612,131.36:0.345543,0.345543:0.0,8.75503e-05,0.999917	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:175.6:326.675,113.385:0.0,0.0:0.0,4.95853e-06,0.999995
+chr1	9156695	.	GATGATGATGATGATGAT	.	.	.	END=9156712;RU=gat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999953:6,6:5-6,5-6:18,25,0,5:6,18:4,2|5,3:340.272:366.612,131.36:0.236383,0.236383:1.4e-44,1.58438e-05,0.999986	0/0:36:0.999722:6,6:6-6,6-6:15,16,0,5:6,15:3,1|4,2|5,2:250.053:326.675,113.385:0.0,0.0:4.94222e-37,0.000153961,0.999849
+chr1	9157471	.	TGGTTGGTTGGTTGGTTGGTTGGT	.	.	.	END=9157494;RU=tggt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:6,6:6-6,6-6:19,16,0,6:6,19:2,1|3,2|4,1|5,2:269.107:366.612,131.36:0.0,0.0:0.0,8.59828e-06,0.999994	0/0:41:0.999594:6,6:5-6,5-6:14,19,0,7:6,14:3,1|4,5|5,1:286.031:326.675,113.385:0.334882,0.334882:0.0,0.000298026,0.999705
+chr1	9158960	.	AACAACAACAACAAC	AACAACAACAACAACAACAAC	.	.	END=9158974;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.987689:7,7:7-7,7-7:10,17,0,6:7,10:3,1|4,2|5,1|6,2:247.771:366.612,131.36:0.29703,0.29703:0.0,0.00145246,0.998551	0/0:27:1.0:5,5:5-5,5-5:19,6,0,2:5,19:4,2:146.829:326.675,113.385:0.0,0.0:0.0,7.46421e-06,0.999994
+chr1	9164239	.	CAACAACAACAA	.	.	.	END=9164250;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.984929:4,4:4-4,4-4:10,22,0,0:4,10:NULL:242.204:366.612,131.36:0.0,0.0:2.12531e-29,0.0121012,0.987928	0/0:39:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:226.222:326.675,113.385:0.0,0.0:0.0,5.94517e-07,1.0
+chr1	9167899	.	AACAAAAACAAAAACAAA	.	.	.	END=9167916;RU=aacaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999676:3,3:3-3,3-3:15,14,0,2:3,15:2,1|3,1:208.483:366.612,131.36:0.0,0.0:0.0,0.000197021,0.999804	0/0:18:0.997682:3,3:3-3,3-3:12,6,0,0:3,12:NULL:107.052:326.675,113.385:0.0,0.0:4.81654e-40,0.00123496,0.99877
+chr1	9168809	.	TGGTGGTGGTGG	.	.	.	END=9168820;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,22,0,0:4,28:NULL:321.123:366.612,131.36:0.0,0.0:0.0,3.43302e-08,1.0	0/0:39:1.00001:4,4:4-4,4-4:21,16,0,2:4,21:3,2:240.021:326.675,113.385:0.0,0.0:0.0,1.95118e-06,1.0
+chr1	9174269	.	AAAATAAAATAAAAT	.	.	.	END=9174283;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998659:3,3:3-3,3-3:13,8,0,0:3,13:NULL:121.529:366.612,131.36:0.0,0.0:4.34e-43,0.000804771,0.999197	0/0:23:0.999924:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.148:326.675,113.385:0.0,0.0:0.0,4.24173e-05,0.999957
+chr1	9185149	.	AAATAAATAAAT	.	.	.	END=9185160;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:188.035:366.612,131.36:0.0,0.0:0.0,1.60488e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:200.239:326.675,113.385:0.0,0.0:0.0,3.84078e-08,1.0
+chr1	9190774	.	TGTTTGTTTGTT	.	.	.	END=9190785;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998971:3,3:3-3,3-3:13,8,0,0:3,13:NULL:126.822:366.612,131.36:0.0,0.0:3.9e-44,0.000613067,0.999392	0/0:28:0.999996:3,3:3-3,3-3:18,7,0,3:3,18:2,3:155.211:326.675,113.385:0.0,0.0:0.0,1.06511e-05,0.999993
+chr1	9192850	.	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG,AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	.	.	END=9192944;RU=aaagg;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0708864:15,15:12-16,12-16:0,10,0,12:NULL:3,1|5,1|6,1|7,2|8,1|9,1|11,1|12,1|13,2|14,1:174.677:366.612,131.36:1.04623,1.04623:1.0,0.0,0.0	2/2:36:0.634562:17,17:9-17,9-17:4,14,0,17:17,4:2,1|5,1|6,2|8,1|9,2|11,1|13,3|14,1|15,3|16,2:270.043:326.675,113.385:3.99824,3.99824:0.88729,0.11281,2.86131e-10
+chr1	9198920	.	ATCCATCCATCC	.	.	.	END=9198931;RU=atcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:20,11,0,2:3,20:2,2:195.498:366.612,131.36:0.0,0.0:0.0,2.88559e-06,1.0	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:247.93:326.675,113.385:0.0,0.0:0.0,1.34858e-07,1.0
+chr1	9200129	.	TTTATTTATTTA	.	.	.	END=9200140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:209.886:366.612,131.36:0.0,0.0:0.0,9.18779e-06,0.999993	0/0:44:1.0:3,3:3-3,3-3:36,6,0,2:3,36:2,2:212.001:326.675,113.385:0.0,0.0:0.0,4.11194e-11,1.0
+chr1	9201395	.	TATATATATATATATATATATATATATATATATATATATA	TATATA	.	.	END=9201434;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00226727:3,3:21-24,21-24:0,2,0,0:NULL:NULL:17.2916:366.612,131.36:1.13521,1.13521:0.516699,0.405381,0.0780363	0/0:9:0.134691:20,20:19-22,19-22:2,4,0,0:20,2:NULL:51.6454:326.675,113.385:0.765776,0.765776:0.00662868,0.410622,0.58284
+chr1	9203282	.	AGTCAGTCAGTC	.	.	.	END=9203293;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:19,15,0,2:3,19:2,2:229.987:366.612,131.36:0.0,0.0:0.0,5.45693e-06,0.999995	0/0:40:1.00001:3,3:3-3,3-3:20,15,0,5:3,20:2,5:257.356:326.675,113.385:0.0,0.0:0.0,3.54959e-06,1.0
+chr1	9204564	.	TCATCATCATCA	.	.	.	END=9204575;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:217.629:366.612,131.36:0.0,0.0:0.0,2.91543e-07,1.0	0/0:31:0.999999:4,4:4-4,4-4:18,8,0,5:4,18:3,5:181.185:326.675,113.385:0.0,0.0:0.0,8.05792e-06,0.999994
+chr1	9211529	.	CAAAACAAAACAAAA	.	.	.	END=9211543;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:2-3,2-3:21,12,0,2:3,21:2,2:212.916:366.612,131.36:0.374147,0.374147:0.0,2.66644e-06,1.0	0/0:26:0.999935:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.809:326.675,113.385:0.0,0.0:0.0,4.89388e-05,0.999955
+chr1	9211779	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACAC	.	.	END=9211816;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.913569:14,14:13-14,13-14:11,9,0,15:13,2|14,9:4,1|5,1|6,2|7,1|9,1|10,2|11,4|12,2|13,1:254.655:366.612,131.36:0.345543,0.345543:1.0,0.0,0.0	0/0:29:0.814705:19,19:18-20,18-20:6,12,0,9:19,6:6,1|7,2|14,1|15,1|16,2|18,2:206.507:326.675,113.385:0.55233,0.55233:1.1296e-08,0.0586354,0.941447
+chr1	9216945	.	GAGGGAGGGAGG	.	.	.	END=9216956;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:247.435:366.612,131.36:0.0,0.0:0.0,4.13697e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:193.378:326.675,113.385:0.0,0.0:0.0,3.34687e-06,1.0
+chr1	9218068	.	AATTAATTAATT	.	.	.	END=9218079;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.995878:3,3:3-3,3-3:11,8,0,0:3,11:NULL:117.08:366.612,131.36:0.0,0.0:4.43428e-34,0.00242352,0.997586	0/0:24:0.999921:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.889:326.675,113.385:0.0,0.0:0.0,4.7444e-05,0.999955
+chr1	9225255	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	END=9225306;RU=gaaa;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:33:0.999997:13,14:13-14,14-14:12,13,0,8:13,5|14,7:4,1|6,2|8,2|11,2|12,1:234.093:366.612,131.36:0.169767,0.0:1.91211e-24,1.68997e-08,1.0	0/0:33:0.838936:13,13:5-13,5-13:6,14,0,12:13,6:2,1|3,1|4,2|6,1|8,1|9,1|10,3|11,1|12,1:248.732:326.675,113.385:4.05346,4.05346:4.40474e-13,0.112307,0.88779
+chr1	9226135	.	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATA,ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9226188;RU=ata;PERIOD=3;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.998211:10,10:9-11,9-11:13,24,0,9:10,13:3,2|6,1|7,3|8,1|9,2:335.221:366.612,131.36:0.312156,0.312156:1.0,0.0,0.0	2/0:22:0.990369:17,18:16-18,16-18:7,5,0,9:17,3|18,4:4,1|5,1|7,3|8,1|9,1|14,1|16,1:147.675:326.675,113.385:0.480988,0.363786:6.80332e-05,0.991309,0.00864358
+chr1	9227593	.	TGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9227613;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.967829:7,7:7-7,7-7:8,9,0,3:7,8:5,1|6,2:136.638:366.612,131.36:0.0,0.0:4.71476e-15,0.00994836,0.990074	0/0:18:0.996976:7,7:6-7,6-7:12,3,0,2:7,12:5,1|6,1:91.0383:326.675,113.385:0.236383,0.236383:7.79232e-22,0.00126966,0.998733
+chr1	9227617	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=9227655;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.953525:13,13:13-13,13-13:8,9,0,4:13,8:6,1|9,1|10,1|12,1:147.325:366.612,131.36:0.0,0.0:7.76344e-13,0.0174828,0.982554	0/0:24:0.945038:13,13:12-13,12-13:8,7,0,8:13,8:3,3|5,1|6,2|7,1|11,1:156.105:326.675,113.385:0.298675,0.298675:1.16214e-12,0.0303655,0.969693
+chr1	9229745	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9229764;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.997521:5,5:5-5,5-5:12,14,0,6:5,12:2,1|3,4|4,1:219.47:366.612,131.36:0.0,0.0:9.983e-42,0.00150345,0.998503	0/0:35:1.00001:5,5:5-5,5-5:21,11,0,3:5,21:3,1|4,2:208.109:326.675,113.385:0.0,0.0:0.0,2.10188e-06,1.0
+chr1	9235751	.	TCTGATGTCTGTGTTCTGATGTCTGTGTTCTGATGTCTGTGT	.	.	.	END=9235792;RU=tctgatgtctgtgt;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.995393:3,3:3-3,3-3:15,24,0,0:3,15:NULL:287.148:366.612,131.36:0.0,0.0:1.91692e-17,0.00460891,0.995402	0/0:26:0.801702:3,3:1-3,1-3:8,18,0,0:3,8:NULL:202.589:326.675,113.385:0.569802,0.569802:1.96275e-09,0.194535,0.805516
+chr1	9247060	.	GGGTGGGTGGGT	.	.	.	END=9247071;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.828891:3,3:3-3,3-3:6,23,0,0:3,6:NULL:223.101:366.612,131.36:0.19802,0.19802:2.50678e-18,0.110301,0.889796	0/0:23:0.959299:3,3:3-3,3-3:8,15,0,0:3,8:NULL:165.037:326.675,113.385:0.0,0.0:1.89467e-24,0.0252493,0.9748
+chr1	9251161	.	AAATAAATAAAT	.	.	.	END=9251172;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997824:3,3:3-3,3-3:13,21,0,0:3,13:NULL:250.863:366.612,131.36:0.0,0.0:1.0388e-41,0.00169011,0.998315	0/0:26:0.999524:3,3:3-3,3-3:14,12,0,0:3,14:NULL:160.371:326.675,113.385:0.0,0.0:1e-45,0.000271586,0.999729
+chr1	9252401	.	AGAGAGAGAGAG	.	.	.	END=9252412;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999986:6,6:6-6,6-6:19,25,0,5:6,19:4,3|5,2:348.615:366.612,131.36:0.0,0.0:0.0,9.15573e-06,0.999993	0/0:37:1.0:6,6:6-6,6-6:24,13,0,0:6,24:NULL:213.251:326.675,113.385:0.0,0.0:0.0,5.19551e-07,1.0
+chr1	9253812	.	TAAATAAATAAA	.	.	.	END=9253823;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:216.651:366.612,131.36:0.0,0.0:0.0,5.9982e-06,0.999995	0/0:28:1.0:3,3:3-3,3-3:24,4,0,0:3,24:NULL:130.617:326.675,113.385:0.0,0.0:0.0,2.63531e-07,1.0
+chr1	9257431	.	AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAG	AGACAGAGACAGAGACAGAGACAG	.	.	END=9257472;RU=agacag;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999995:4,4:4-4,4-4:19,18,0,4:4,19:2,3|3,1:271.847:366.612,131.36:0.0,0.0:1.0,8.86764e-07,0.0	0/0:44:0.999974:7,7:7-7,7-7:18,16,0,10:7,18:4,6|6,4:297.01:326.675,113.385:0.0,0.0:0.0,2.37702e-05,0.999979
+chr1	9258341	.	CTTCCTTCCTTCCTTC	.	.	.	END=9258356;RU=cttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:24,17,0,0:4,24:NULL:255.707:366.612,131.36:0.0,0.0:0.0,1.40646e-06,1.0	0/0:47:1.0:4,4:4-4,4-4:25,22,0,0:4,25:NULL:303.27:326.675,113.385:0.0,0.0:0.0,5.21673e-07,1.0
+chr1	9260912	.	AAGAAAAGAAAAGAA	.	.	.	END=9260926;RU=aagaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,12,0,0:3,30:NULL:231.624:366.612,131.36:0.0,0.0:0.0,3.85823e-09,1.0	0/0:29:1.0:3,3:3-3,3-3:25,4,0,0:3,25:NULL:137.727:326.675,113.385:0.0,0.0:0.0,1.41967e-07,1.0
+chr1	9273522	.	TTGATTGATTGATTGATTGATTGATTGA	.	.	.	END=9273549;RU=ttga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:7,7:7-7,7-7:36,23,0,7:7,36:2,3|5,3|6,1:408.576:366.612,131.36:0.0,0.0:0.0,1.05388e-10,1.0	0/0:63:1.0:7,7:7-7,7-7:34,21,0,7:7,34:2,2|3,3|5,1|6,1:399.62:326.675,113.385:0.0,0.0:0.0,1.36727e-09,1.0
+chr1	9274125	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9274170;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:49:0.28917:18,28:18-18,18-30:17,16,0,14:17,2|18,15:5,1|6,1|7,1|9,2|10,2|13,1|15,2|16,1|17,2|28,1:348.667:366.612,131.36:0.0,5.02939:0.00361416,0.996398,7e-45	2/0:44:0.956737:22,23:19-23,23-23:15,14,0,14:21,2|22,5|23,8:5,1|8,2|9,2|10,1|12,1|13,1|16,5|21,1:320.63:326.675,113.385:0.899847,0.39604:5.11288e-07,0.96099,0.0390799
+chr1	9277902	.	ATATATATATATATAT	.	.	.	END=9277917;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.988758:8,8:8-9,8-9:11,11,0,0:8,11:NULL:149.074:366.612,131.36:0.253975,0.253975:2.95112e-15,0.00717039,0.992844	0/0:21:0.999429:8,8:8-8,8-8:15,5,0,0:8,15:NULL:105.87:326.675,113.385:0.0,0.0:8.80438e-21,0.000358104,0.999644
+chr1	9279853	.	ATACATACATACATAC	.	.	.	END=9279868;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:23,18,0,2:4,23:3,2:269.686:366.612,131.36:0.0,0.0:0.0,7.3893e-07,1.0	0/0:38:1.00001:4,4:4-4,4-4:22,12,0,4:4,22:2,2|3,2:224.55:326.675,113.385:0.0,0.0:0.0,8.97549e-07,1.0
+chr1	9281951	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9281994;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.838921:21,21:20-21,20-21:7,10,0,11:21,7:5,1|7,1|10,3|12,1|13,1|14,1|16,2|18,1:207.014:366.612,131.36:0.253975,0.253975:0.911248,0.0888383,1.37494e-05	0/0:43:0.998108:22,22:22-22,22-22:14,11,0,18:22,14:6,1|8,1|9,3|11,2|13,1|14,1|15,2|18,1|19,2|20,2|21,2:309.278:326.675,113.385:0.0,0.0:1.38778e-17,0.000334466,0.999667
+chr1	9282129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9282164;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.276294:24,27:23-25,23-27:5,15,0,15:23,2|24,3:5,1|6,1|9,1|10,1|12,1|15,3|16,1|17,1|18,1|23,3|26,1:284.08:366.612,131.36:0.459943,1.26972:0.0,0.0,1.0	0/0:41:0.989568:18,18:17-18,17-18:19,12,0,8:17,4|18,15:4,1|6,1|9,1|10,1|14,1|16,1|17,1|18,1:261.136:326.675,113.385:0.290354,0.290354:1.77746e-23,0.0103277,0.989694
+chr1	9285357	.	TTTATTTATTTA	.	.	.	END=9285368;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:232.842:366.612,131.36:0.0,0.0:0.0,4.84406e-06,0.999995	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.413:326.675,113.385:0.0,0.0:0.0,4.26591e-06,0.999995
+chr1	9286427	.	TTTTATTTTATTTTA	.	.	.	END=9286441;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:20,15,0,2:3,20:2,2:228.55:366.612,131.36:0.0,0.0:0.0,3.13928e-06,1.0	0/0:21:0.989896:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.98:326.675,113.385:0.0,0.0:1.23609e-32,0.00643952,0.993578
+chr1	9289377	.	TATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=9289400;RU=tatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999907:9,9:1-9,1-9:16,18,0,14:9,16:3,1|5,3|6,3|7,3|8,4:326.474:366.612,131.36:3.40502,3.40502:0.0,1.19741e-07,1.0	0/0:20:0.997387:6,6:6-6,6-6:12,4,0,4:6,12:3,2|4,1|5,1:114.495:326.675,113.385:0.0,0.0:1.98832e-30,0.00113359,0.998869
+chr1	9290815	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9290852;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:0.967706:19,19:18-19,18-19:15,18,0,13:18,3|19,12:5,1|8,1|9,1|10,2|11,1|13,3|15,1|16,1|17,1|18,1:340.356:366.612,131.36:0.399735,0.399735:1.49956e-12,0.0314958,0.968563	0/0:25:0.655712:19,19:11-20,11-20:5,9,0,8:19,5:5,2|7,1|12,1|14,1|15,1|18,2:166.296:326.675,113.385:3.94512,3.94512:1.10631e-06,0.124407,0.875694
+chr1	9296627	.	ATTAATTAATTA	.	.	.	END=9296638;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999935:3,3:3-3,3-3:16,12,0,3:3,16:2,3:190.493:366.612,131.36:0.0,0.0:0.0,3.03256e-05,0.999971	0/0:43:1.00001:3,3:3-3,3-3:21,19,0,3:3,21:2,3:278.445:326.675,113.385:0.0,0.0:0.0,1.42207e-06,1.0
+chr1	9296985	.	AAAGAAAGAAAG	.	.	.	END=9296996;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:240.218:366.612,131.36:0.0,0.0:0.0,2.7802e-07,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:190.06:326.675,113.385:0.0,0.0:0.0,6.452e-07,1.0
+chr1	9301041	.	TAAATAAATAAA	.	.	.	END=9301052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.992895:3,3:3-3,3-3:10,11,0,0:3,10:NULL:142.384:366.612,131.36:0.0,0.0:4.71169e-33,0.0039423,0.996067	0/0:28:0.999938:3,3:3-3,3-3:17,9,0,2:3,17:2,2:162.806:326.675,113.385:0.0,0.0:0.0,2.85568e-05,0.999972
+chr1	9302120	.	CACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACA	.	.	END=9302159;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.938087:18,19:16-19,18-20:10,23,0,10:18,5|19,5:7,1|8,1|11,1|13,1|15,1|16,3|18,1|19,1:334.803:366.612,131.36:0.667418,0.371782:0.997883,0.00212291,4.80765e-08	0/0:49:0.990551:20,20:19-20,19-20:14,18,0,15:19,2|20,12:8,2|10,1|12,2|14,1|15,1|16,4|18,2|19,1|20,1:349.293:326.675,113.385:0.390054,0.390054:4.34398e-19,0.00830726,0.991711
+chr1	9302309	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9302354;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.993142:19,19:18-19,18-19:20,16,0,8:18,3|19,17:6,1|7,1|8,1|10,1|12,1|15,1|16,1|18,1:304.203:366.612,131.36:0.275098,0.275098:1.0,0.0,0.0	0/2:49:0.303115:23,38:23-23,2-39:13,15,0,18:21,2|23,9|24,2:6,1|7,1|8,1|9,1|10,1|12,2|14,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|32,1|38,1:361.606:326.675,113.385:0.243733,12.4842:8.54821e-26,9.88519e-09,1.0
+chr1	9307495	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA,TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=9307558;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.84055:17,17:16-17,16-17:6,12,0,10:17,6:3,1|5,1|6,1|8,1|13,2|14,2|15,2:211.044:366.612,131.36:0.425627,0.425627:3.8558e-15,0.0676248,0.93247	1/1:36:0.997979:15,15:14-15,14-15:13,9,0,13:15,13:5,1|7,1|8,3|9,3|10,2|13,2|14,1:237.268:326.675,113.385:0.253975,0.253975:0.998922,0.00108148,1.56142e-16
+chr1	9310514	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9310563;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.486569:25,25:22-26,22-26:11,10,0,19:24,2|25,7|26,2:8,1|9,2|11,4|13,1|14,1|16,1|17,1|18,1|19,1|20,1|22,1|23,2|24,2:299.975:366.612,131.36:1.02923,1.02923:2.07079e-08,0.0369271,0.963139	0/1:31:0.298027:25,35:24-25,24-35:8,11,0,12:24,2|25,6:5,1|9,2|10,1|11,1|12,1|13,1|15,1|20,1|23,1|24,1|34,1:247.892:326.675,113.385:0.169767,4.95744:5.61813e-11,1.06178e-05,0.999993
+chr1	9314806	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9314831;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:39:0.768871:23,24:23-24,24-24:9,13,0,17:23,3|24,6:4,1|5,1|6,2|7,1|9,2|10,2|11,3|16,2|17,1|19,1|20,1:301.593:366.612,131.36:0.499975,0.0:0.0,0.0,1.0	0/1:47:0.856598:13,14:13-13,13-14:22,15,0,10:12,3|13,19:4,1|5,2|6,1|8,1|9,1|11,2|12,1|14,1:329.622:326.675,113.385:0.0,0.515422:7.72604e-23,7.13848e-06,0.999994
+chr1	9318491	.	TATATATATATATA	.	.	.	END=9318504;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:7,7:7-7,7-7:26,17,0,0:7,26:NULL:263.698:366.612,131.36:0.0,0.0:5.19875e-33,2.97156e-07,1.0	0/0:20:0.998886:7,7:6-7,6-7:14,5,0,0:7,14:NULL:101.696:326.675,113.385:0.323567,0.323567:2.86529e-18,0.000686551,0.999317
+chr1	9324727	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=9324744;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99986:3,3:3-3,3-3:17,12,0,0:3,17:NULL:185.029:366.612,131.36:0.0,0.0:0.0,0.000120491,0.99988	0/0:18:0.996535:3,3:3-3,3-3:11,5,0,2:3,11:2,2:100.743:326.675,113.385:0.0,0.0:3.86184e-38,0.00153338,0.998473
+chr1	9326142	.	TCCCTCCCTCCC	.	.	.	END=9326153;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:26,28,0,0:3,26:NULL:358.283:366.612,131.36:0.0,0.0:0.0,3.30543e-07,1.0	0/0:34:0.999349:3,3:3-3,3-3:14,20,0,0:3,14:NULL:244.48:326.675,113.385:0.0,0.0:0.0,0.000523905,0.999477
+chr1	9328079	.	AAACAAACAAAC	.	.	.	END=9328090;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:24,4,0,2:3,24:2,2:148.846:366.612,131.36:0.0,0.0:0.0,1.27146e-07,1.0	0/0:68:1.0:3,3:3-3,3-3:44,21,0,2:3,44:2,2:371.366:326.675,113.385:0.0,0.0:0.0,1.8272e-13,1.0
+chr1	9332135	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTG,TTTGTTTGTTTGTTTGTTTG	.	.	END=9332150;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:48:1.0:3,5:3-3,5-5:27,21,0,0:3,9|5,18:NULL:331.849:366.612,131.36:0.0,0.0:0.0,1.0,1.0768e-11	0/0:31:0.99967:4,4:4-4,4-4:15,12,0,4:4,15:3,4:197.49:326.675,113.385:0.0,0.0:0.0,0.00013273,0.999871
+chr1	9335058	.	TTTTGTTTTGTTTTG	.	.	.	END=9335072;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.304:366.612,131.36:0.0,0.0:0.0,4.31613e-06,0.999995	0/0:29:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:145.745:326.675,113.385:0.0,0.0:0.0,6.17845e-07,1.0
+chr1	9336951	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9336970;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999245:4,4:4-4,4-4:14,17,0,2:4,14:2,1|3,1:230.494:366.612,131.36:0.0,0.0:1e-45,0.000526817,0.999476	0/0:26:0.978285:4,4:3-4,3-4:9,12,0,4:4,9:3,4:176.105:326.675,113.385:0.497026,0.497026:4.14237e-29,0.0118562,0.988168
+chr1	9340284	.	TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC	TGCTGCTGCTGCTGCTGCTGCTGCTGC	.	.	END=9340316;RU=tgc;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999971:9,9:9-9,9-9:18,16,0,5:9,18:4,1|6,2|7,1|8,1:264.09:366.612,131.36:0.0,0.0:0.999993,1.10553e-05,4.96732e-40	0/0:27:0.992223:11,11:11-11,11-11:10,9,0,8:11,10:3,1|4,2|7,1|9,1|10,3:192.427:326.675,113.385:0.0,0.0:2.04128e-27,0.00258091,0.997427
+chr1	9346828	.	TCATCATCATCA	.	.	.	END=9346839;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:41,4,0,0:4,41:NULL:195.359:366.612,131.36:0.0,0.0:0.0,2.65167e-12,1.0	0/0:42:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:257.942:326.675,113.385:0.0,0.0:0.0,6.09121e-07,1.0
+chr1	9348812	.	TTTGTTTTGTTTTGT	TTTGT	.	.	END=9348826;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0735964:1,1:1-4,1-4:0,19,0,0:NULL:NULL:177.141:366.612,131.36:0.883688,0.883688:0.231507,0.512275,0.256255	0/0:23:0.999229:3,3:3-3,3-3:14,9,0,0:3,14:NULL:141.122:326.675,113.385:0.0,0.0:0.0,0.000509649,0.999492
+chr1	9350228	.	ACAGCGACAGCGACAGCG	ACAGCG	.	.	END=9350245;RU=acagcg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.165627:1,1:1-2,1-2:0,21,0,0:NULL:NULL:186.527:366.612,131.36:0.311527,0.311527:0.406392,0.475241,0.118464	0/0:44:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:276.894:326.675,113.385:0.0,0.0:0.0,2.46273e-07,1.0
+chr1	9350646	.	TTTGTTTGTTTG	.	.	.	END=9350657;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999568:3,3:3-3,3-3:15,17,0,0:3,15:NULL:219.527:366.612,131.36:0.0,0.0:1e-45,0.00031849,0.999682	0/0:29:0.999998:3,3:3-3,3-3:18,9,0,2:3,18:2,2:163.919:326.675,113.385:0.0,0.0:0.0,9.79155e-06,0.999993
+chr1	9352617	.	TTTGTTTGTTTG	.	.	.	END=9352628;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:31,16,0,0:3,31:NULL:268.199:366.612,131.36:0.0,0.0:0.0,2.12163e-09,1.0	0/0:54:1.0:3,3:3-3,3-3:39,15,0,0:3,39:NULL:292.504:326.675,113.385:0.0,0.0:0.0,1.07657e-11,1.0
+chr1	9360153	.	TTGTTTGTTTGT	.	.	.	END=9360164;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:250.243:366.612,131.36:0.0,0.0:0.0,9.24726e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:198.994:326.675,113.385:0.0,0.0:0.0,5.31601e-07,1.0
+chr1	9366180	.	TCCCTCCCTCCCTCCC	.	.	.	END=9366195;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999289:4,4:4-4,4-4:15,11,0,0:4,15:NULL:159.697:366.612,131.36:0.0,0.0:0.0,0.00051322,0.999491	0/0:25:1.00001:4,4:4-4,4-4:21,4,0,0:4,21:NULL:122.492:326.675,113.385:0.0,0.0:0.0,3.79849e-06,1.0
+chr1	9384508	.	TGTGTGTGTGTG	TGTGTGTGTG,TGTGTGTGTGTGTG	.	.	END=9384519;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:53:0.99989:5,7:5-5,6-7:29,19,0,4:5,17|6,4|7,8:5,2|6,2:354.905:366.612,131.36:0.0,0.352842:1.35892e-21,1.0,9.49165e-16	0/0:26:0.628284:6,6:5-6,5-6:20,6,0,0:5,4|6,16:NULL:150.794:326.675,113.385:0.44763,0.44763:7.92581e-13,0.371769,0.62828
+chr1	9384520	.	TATATATATATATATATA	TATATATATATATATA	.	.	END=9384537;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.908251:8,8:6-10,6-10:18,21,0,0:8,15|9,3:NULL:276.123:366.612,131.36:0.754427,0.754427:0.908294,0.0918042,1.71562e-14	0/0:22:0.815459:9,9:8-9,8-9:16,6,0,0:8,3|9,13:NULL:131.98:326.675,113.385:0.425627,0.425627:3.99286e-13,0.184457,0.815606
+chr1	9392580	.	CACACACACACACACA	.	.	.	END=9392595;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:8,8:8-8,8-8:26,22,0,3:8,26:4,1|6,1|7,1:333.753:366.612,131.36:0.0,0.0:3.5e-44,1.14853e-07,1.0	0/0:48:1.0:8,8:8-8,8-8:32,12,0,3:8,32:5,2|6,1:259.698:326.675,113.385:0.0,0.0:0.0,1.69574e-09,1.0
+chr1	9394954	.	TTTCTTTTCTTTTCT	.	.	.	END=9394968;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999994:3,3:3-3,3-3:19,10,0,0:3,19:NULL:167.96:366.612,131.36:0.0,0.0:0.0,1.26792e-05,0.999987	0/0:30:0.999975:3,3:3-3,3-3:18,12,0,0:3,18:NULL:178.442:326.675,113.385:0.0,0.0:0.0,3.36197e-05,0.99997
+chr1	9397849	.	TCTCTCTCTCTC	.	.	.	END=9397860;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:6,6:6-6,6-6:38,21,0,0:6,38:NULL:345.738:366.612,131.36:0.0,0.0:0.0,6.80768e-11,1.0	0/0:40:1.0:6,6:6-6,6-6:24,15,0,0:6,24:NULL:235.651:326.675,113.385:0.0990099,0.0990099:0.0,9.29089e-07,1.0
+chr1	9400767	.	GAGGGAGGGAGG	.	.	.	END=9400778;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:33,27,0,0:3,33:NULL:381.784:366.612,131.36:0.0,0.0:0.0,1.46477e-09,1.0	0/0:38:1.00001:3,3:3-3,3-3:21,15,0,2:3,21:2,2:237.819:326.675,113.385:0.0,0.0:0.0,1.35646e-06,1.0
+chr1	9407672	.	ATATATATATATATAT	AT	.	.	END=9407687;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0268074:1,1:1-6,1-6:0,22,0,0:NULL:NULL:205.027:366.612,131.36:1.55644,1.55644:0.381771,0.483122,0.135186	0/0:19:0.986192:8,8:8-9,8-9:10,8,0,0:8,10:NULL:115.125:326.675,113.385:0.345543,0.345543:1.81266e-16,0.00695297,0.993062
+chr1	9413992	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9414011;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.996606:7,7:7-7,7-7:11,10,0,4:7,11:5,1|6,3:166.465:366.612,131.36:0.0,0.0:0.0,7.4379e-05,0.999926	0/0:36:0.999055:5,5:5-5,5-5:13,16,0,7:5,13:2,1|3,3|4,3:248.56:326.675,113.385:0.0,0.0:5.94545e-39,0.000475321,0.999529
+chr1	9418611	.	TTCTTTCTTTCT	.	.	.	END=9418622;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,19,0,2:3,22:2,2:271.278:366.612,131.36:0.0,0.0:0.0,1.01741e-06,1.0	0/0:37:1.0:3,3:3-3,3-3:26,11,0,0:3,26:NULL:199.853:326.675,113.385:0.0,0.0:0.0,9.92493e-08,1.0
+chr1	9420278	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=9420321;RU=tgtt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999993:8,8:8-8,8-8:18,22,0,9:8,18:3,1|5,3|6,1|7,4:343.572:366.612,131.36:0.0990099,0.0990099:1.0,2.31478e-06,0.0	0/0:53:1.0:11,11:11-15,11-15:29,15,0,7:11,29:3,3|5,2|9,1|10,1:313.405:326.675,113.385:1.08025,1.08025:0.0,1.55196e-08,1.0
+chr1	9422121	.	AATAAATAAATA	.	.	.	END=9422132;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999562:3,3:3-3,3-3:14,7,0,0:3,14:NULL:123.654:366.612,131.36:0.0,0.0:1.8e-44,0.000234214,0.999766	0/0:21:0.998933:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.022:326.675,113.385:0.0,0.0:2.4053e-41,0.000576164,0.999424
+chr1	9424740	.	TCTCTTCTCTTCTCT	.	.	.	END=9424754;RU=tctct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999984:3,3:3-3,3-3:18,16,0,0:3,18:NULL:218.131:366.612,131.36:0.0,0.0:0.0,2.62183e-05,0.999978	0/0:20:0.997447:3,3:3-3,3-3:12,8,0,0:3,12:NULL:121.749:326.675,113.385:0.0,0.0:3.67533e-40,0.00153279,0.998473
+chr1	9431832	.	AAACCAAAACCAAAACCA	.	.	.	END=9431849;RU=aaacca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999845:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.258:366.612,131.36:0.0,0.0:0.0,0.000104917,0.999896	0/0:25:0.999993:3,3:3-3,3-3:19,6,0,0:3,19:NULL:134.242:326.675,113.385:0.0,0.0:0.0,1.72612e-05,0.999986
+chr1	9435914	.	ACAGAGACAGAGACAGAGACAGAG	.	.	.	END=9435937;RU=acagag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999917:4,4:3-4,3-4:16,21,0,4:4,16:2,2|3,2:279.521:366.612,131.36:0.374147,0.374147:0.0,6.21351e-05,0.99994	0/0:27:0.999746:4,4:3-4,3-4:15,8,0,3:4,15:2,2|3,1:155.267:326.675,113.385:0.374147,0.374147:7e-45,0.00014349,0.999857
+chr1	9438550	.	AAATCAAATCAAATC	.	.	.	END=9438564;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999971:3,3:3-3,3-3:18,19,0,0:3,18:NULL:249.079:366.612,131.36:0.0,0.0:0.0,3.60357e-05,0.999964	0/0:35:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:208.921:326.675,113.385:0.0,0.0:0.0,4.69581e-06,0.999995
+chr1	9440244	.	CCACCACCACCACCACCA	.	.	.	END=9440261;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:19,13,0,5:6,19:4,2|5,3:240.689:366.612,131.36:0.0,0.0:0.0,4.53287e-06,0.999995	0/0:31:1.00001:6,6:6-6,6-6:22,7,0,2:6,22:5,2:161.055:326.675,113.385:0.0,0.0:0.0,8.65582e-07,1.0
+chr1	9440854	.	TTATTATTATTATTA	.	.	.	END=9440868;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997378:5,5:5-5,5-5:11,10,0,3:5,11:4,3:159.876:366.612,131.36:0.0,0.0:3.52558e-28,0.00105255,0.998952	0/0:15:0.981375:5,5:5-5,5-5:9,4,0,2:5,9:4,2:90.8043:326.675,113.385:0.0,0.0:8.55695e-23,0.00799974,0.992018
+chr1	9442366	.	TCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=9442379;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.983957:8,8:8-9,8-9:10,18,0,0:8,10:NULL:206.99:366.612,131.36:0.46122,0.46122:7.8753e-34,0.00705923,0.992956	0/0:34:0.990911:7,7:6-8,6-8:11,21,0,0:7,11:NULL:231.834:326.675,113.385:0.446534,0.446534:6.00934e-24,0.00629505,0.993721
+chr1	9443711	.	ATACATACATACATAC	.	.	.	END=9443726;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.9997:4,4:4-4,4-4:14,18,0,4:4,14:2,1|3,3:250.416:366.612,131.36:0.0,0.0:1.09036e-38,0.000189682,0.999812	0/0:15:0.993713:4,4:4-4,4-4:11,4,0,0:4,11:NULL:78.9:326.675,113.385:0.0,0.0:1.21939e-30,0.00338957,0.996618
+chr1	9444202	.	ACCCACCCACCC	.	.	.	END=9444213;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.661794:3,3:2-3,2-3:4,20,0,0:3,4:NULL:195.19:366.612,131.36:0.240494,0.240494:1.39751e-12,0.218393,0.781647	0/0:26:0.991091:3,3:3-3,3-3:10,16,0,0:3,10:NULL:189.381:326.675,113.385:0.0,0.0:1.7653e-30,0.0063046,0.993708
+chr1	9450506	.	GGGTGGGTGGGT	.	.	.	END=9450517;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999723:3,3:3-3,3-3:15,13,0,0:3,15:NULL:178.435:366.612,131.36:0.0,0.0:0.0,0.000165041,0.999835	0/0:23:0.999917:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.376:326.675,113.385:0.0,0.0:0.0,5.0317e-05,0.999949
+chr1	9452272	.	AAAACAAAACAAAAC	.	.	.	END=9452286;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999909:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.479:366.612,131.36:0.0,0.0:0.0,5.94196e-05,0.999941	0/0:37:1.0:3,3:3-3,3-3:25,9,0,3:3,25:2,3:202.435:326.675,113.385:0.0,0.0:0.0,8.19423e-08,1.0
+chr1	9459770	.	TCTCTCTCTCTC	.	.	.	END=9459781;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998603:6,6:6-6,6-6:13,12,0,3:6,13:5,3:187.993:366.612,131.36:0.0,0.0:7.18605e-30,0.000555701,0.999447	0/0:21:0.998424:6,6:6-7,6-7:13,7,0,0:6,13:NULL:113.472:326.675,113.385:0.345543,0.345543:2.92193e-30,0.000800413,0.999203
+chr1	9461244	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	END=9461298;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.998204:13,13:12-13,12-13:12,16,0,19:13,12:4,4|6,3|7,1|8,2|9,2|10,3|11,1|12,3:336.703:366.612,131.36:0.35561,0.35561:0.0,7.50168e-05,0.999926	0/0:46:0.988769:11,11:6-11,6-11:10,16,0,19:11,10:3,2|4,2|5,3|6,3|7,5|8,1|9,2|10,1:326.85:326.675,113.385:2.23815,2.23815:4.06269e-27,0.00860565,0.991413
+chr1	9462516	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT	.	.	END=9462541;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0142412:12,12:13-17,13-17:0,10,0,0:NULL:NULL:89.5365:366.612,131.36:1.95664,1.95664:0.118219,0.453785,0.428162	0/0:13:0.79068:13,13:11-14,11-14:7,3,0,0:13,7:NULL:60.1106:326.675,113.385:0.783743,0.783743:1.10101e-07,0.0955401,0.904565
+chr1	9463887	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACA	.	.	END=9463930;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:0.296089:19,22:18-19,18-24:10,14,0,9:18,4|19,6:5,1|6,1|10,1|11,1|17,3|18,1|22,1:257.221:366.612,131.36:0.35561,2.07165:5.98453e-05,0.999941,1.80856e-16	0/0:28:0.738784:22,22:21-22,21-22:5,10,0,12:22,5:4,1|5,2|8,1|9,1|11,1|13,1|16,1|17,1|21,3:208.298:326.675,113.385:0.270063,0.270063:6.73055e-07,0.0717911,0.928307
+chr1	9468830	.	GAGGGAGGGAGG	.	.	.	END=9468841;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:20,21,0,0:3,20:NULL:262.44:366.612,131.36:0.0,0.0:0.0,1.11017e-05,0.999993	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:196.84:326.675,113.385:0.0,0.0:0.0,4.90263e-07,1.0
+chr1	9470692	.	CACACACACACA	.	.	.	END=9470703;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:6,6:6-6,6-6:24,8,0,2:6,24:5,2:184.022:366.612,131.36:0.0,0.0:0.0,2.70614e-07,1.0	0/0:41:1.0:6,6:6-6,6-6:25,11,0,5:6,25:4,3|5,2:239.921:326.675,113.385:0.0,0.0:0.0,1.09519e-07,1.0
+chr1	9471535	.	GAGAGGAGAGGAGAG	.	.	.	END=9471549;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.679762:3,3:1-3,1-3:4,13,0,0:3,4:NULL:136.237:366.612,131.36:0.390054,0.390054:2.55998e-13,0.199129,0.800916	0/0:6:0.475982:3,3:3-3,3-3:3,3,0,0:3,3:NULL:40.6212:326.675,113.385:0.281439,0.281439:2.60341e-10,0.221156,0.778882
+chr1	9472682	.	ATGAATGAATGA	.	.	.	END=9472693;RU=atga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.977545:3,3:3-3,3-3:8,13,0,0:3,8:NULL:147.361:366.612,131.36:0.0,0.0:3.09987e-24,0.0139718,0.986059	0/0:22:0.997079:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.437:326.675,113.385:0.0,0.0:7.52693e-33,0.00197559,0.998033
+chr1	9472967	.	TGTGTGTGTGTGTG	.	.	.	END=9472980;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99761:7,7:7-8,7-8:12,11,0,2:7,12:5,1|6,1:161.169:366.612,131.36:0.36513,0.36513:5.2729e-25,0.00114661,0.99886	0/0:22:0.999708:7,7:7-7,7-7:15,5,0,2:7,15:6,2:120.874:326.675,113.385:0.0,0.0:2.76285e-31,0.000108582,0.999894
+chr1	9474757	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=9474784;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:14,14:14-14,14-14:30,17,0,10:13,2|14,28:8,1|10,1|11,3|12,4|13,1:368.603:366.612,131.36:0.0,0.0:1.7378e-41,3.7235e-07,1.0	0/0:50:0.999638:14,14:13-14,13-14:20,20,0,9:12,2|14,18:5,1|7,1|10,3|13,4:347.548:326.675,113.385:0.294378,0.294378:9.25131e-27,0.000345403,0.999658
+chr1	9475821	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9475866;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.306361:19,29:19-20,19-31:14,17,0,9:18,2|19,9|20,3:6,2|7,1|11,2|16,1|17,1|18,1|29,1:310.496:366.612,131.36:0.35561,4.9792:0.00254241,0.997465,1.18371e-28	0/0:32:0.415505:23,23:21-23,21-23:6,9,0,16:22,2|23,4:5,1|7,1|8,1|9,2|10,1|11,2|14,2|16,1|17,1|18,1|19,1|20,2:246.597:326.675,113.385:0.716027,0.716027:0.000398632,0.510801,0.488861
+chr1	9476189	.	GCAGGCAGGCAG	.	.	.	END=9476200;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:217.696:366.612,131.36:0.0,0.0:0.0,3.95231e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:19,13,0,2:3,19:2,2:208.939:326.675,113.385:0.0,0.0:0.0,6.78018e-06,0.999994
+chr1	9482508	.	AATTAATTAATTAATTAATT	.	.	.	END=9482527;RU=aatt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.852369:5,5:5-5,5-5:7,16,0,0:5,7:NULL:175.534:366.612,131.36:0.19802,0.19802:5.761e-20,0.119528,0.880572	0/0:18:0.990887:5,5:5-5,5-5:10,8,0,0:5,10:NULL:112.505:326.675,113.385:0.0,0.0:1.32822e-28,0.00598998,0.994023
+chr1	9482533	.	AAAGAAAGAAAG	.	.	.	END=9482544;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.996445:3,3:3-3,3-3:12,14,0,0:3,12:NULL:176.654:366.612,131.36:0.0,0.0:1.69466e-35,0.00239988,0.997608	0/0:27:0.999906:3,3:3-3,3-3:16,11,0,0:3,16:NULL:162.705:326.675,113.385:0.0,0.0:0.0,5.78138e-05,0.999942
+chr1	9491448	.	AAATAAATAAATAAAT	.	.	.	END=9491463;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.997205:4,4:4-4,4-4:12,3,0,2:4,12:2,1|3,1:90.9731:366.612,131.36:0.0,0.0:9.02464e-38,0.00126858,0.998738	0/0:11:0.987186:4,4:4-4,4-4:10,1,0,0:4,10:NULL:50.208:326.675,113.385:0.0,0.0:6.382e-32,0.00633264,0.993684
+chr1	9496534	.	GAGGGAGGGAGG	.	.	.	END=9496545;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:34,16,0,0:3,34:NULL:275.852:366.612,131.36:0.0,0.0:0.0,1.86609e-10,1.0	0/0:35:1.0:3,3:3-3,3-3:28,7,0,0:3,28:NULL:174.907:326.675,113.385:0.0,0.0:0.0,2.73175e-08,1.0
+chr1	9497089	.	ACCAACCAACCA	.	.	.	END=9497100;RU=acca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999456:3,3:3-3,3-3:16,30,0,0:3,16:NULL:331.528:366.612,131.36:0.0,0.0:0.0,0.000509167,0.999492	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:222.338:326.675,113.385:0.0,0.0:0.0,1.24897e-06,1.0
+chr1	9497489	.	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	ATTATTATTATTATTATTATTATTATTATT	.	.	END=9497533;RU=att;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.994666:10,10:9-10,9-10:12,7,0,0:10,12:NULL:118.12:366.612,131.36:0.270063,0.270063:1.0,0.0,0.0	0/0:23:0.875025:15,15:15-15,15-15:6,9,0,8:15,6:4,1|6,2|8,1|10,1|11,1|13,1|14,1:168.58:326.675,113.385:0.29703,0.29703:1.54199e-10,0.051828,0.948252
+chr1	9497958	.	TTTGTTTGTTTG	.	.	.	END=9497969;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:32,11,0,2:3,32:2,2:241.553:366.612,131.36:0.0,0.0:0.0,9.19255e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:157.936:326.675,113.385:0.0,0.0:0.0,6.28813e-08,1.0
+chr1	9502657	.	ACACACACACAC	.	.	.	END=9502668;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:6,6:6-6,6-6:23,9,0,3:6,23:4,1|5,2:197.511:366.612,131.36:0.0,0.0:0.0,3.19025e-07,1.0	0/0:24:0.999982:6,6:6-6,6-6:18,4,0,2:6,18:4,1|5,1:123.674:326.675,113.385:0.0,0.0:2.646e-42,2.0149e-05,0.99998
+chr1	9504503	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=9504522;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:23,11,0,0:4,23:NULL:194.415:366.612,131.36:0.0,0.0:0.0,9.40221e-07,1.0	0/0:22:0.999891:4,4:4-4,4-4:17,5,0,0:4,17:NULL:115.806:326.675,113.385:0.0,0.0:0.0,7.52509e-05,0.999926
+chr1	9508248	.	CAAACAAACAAA	.	.	.	END=9508259;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,10,0,3:3,22:2,2|3,1:200.333:366.612,131.36:0.0,0.0:0.0,3.35221e-07,1.0	0/0:35:0.9997:3,3:3-3,3-3:15,20,0,0:3,15:NULL:240.187:326.675,113.385:0.0,0.0:0.0,0.000252808,0.99975
+chr1	9508516	.	ATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9508554;RU=ata;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.94838:14,14:14-14,14-14:8,4,0,2:14,8:4,1|10,1:88.2184:366.612,131.36:0.0,0.0:9.66214e-16,0.0202783,0.979761	0/0:33:0.91691:13,13:13-14,13-14:8,15,0,9:13,8:3,1|4,3|5,1|7,1|8,2|10,1:246.436:326.675,113.385:0.374147,0.374147:5.2725e-12,0.0673377,0.932756
+chr1	9508833	.	CACACACACACACACACA	.	.	.	END=9508850;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.955873:9,9:8-9,8-9:9,12,0,0:9,9:NULL:146.289:366.612,131.36:0.270063,0.270063:7.22498e-16,0.0326351,0.967427	0/0:27:0.999883:9,9:9-11,9-11:17,7,0,2:9,17:5,1|8,1:149.286:326.675,113.385:0.691086,0.691086:8.54708e-30,4.60868e-05,0.999956
+chr1	9511167	.	TTATTTATTTAT	.	.	.	END=9511178;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.996662:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.398:366.612,131.36:0.0,0.0:1.32255e-40,0.00211994,0.997889	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:258.692:326.675,113.385:0.0,0.0:0.0,5.52396e-07,1.0
+chr1	9514249	.	TGGATGGATGGATGGA	.	.	.	END=9514264;RU=tgga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:4,4:4-4,4-4:21,9,0,2:4,21:3,2:178.171:366.612,131.36:0.0,0.0:0.0,2.86383e-06,1.0	0/0:30:0.999927:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:178.978:326.675,113.385:0.0,0.0:0.0,3.8318e-05,0.999963
+chr1	9516045	.	AAAGAAAGAAAG	.	.	.	END=9516056;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999963:3,3:3-3,3-3:17,12,0,0:3,17:NULL:175.375:366.612,131.36:0.0,0.0:0.0,3.04347e-05,0.999971	0/0:20:0.999451:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.773:326.675,113.385:0.0,0.0:0.0,0.000288093,0.999713
+chr1	9516633	.	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAG,GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	.	.	END=9516692;RU=gggag;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0677191:6,6:5-8,5-8:0,11,0,4:NULL:3,1|4,2|5,1:125.733:366.612,131.36:1.04988,1.04988:1.0,0.0,0.0	2/2:1:0.00037075:8,8:8-8,8-8:0,1,0,0:NULL:NULL:8.16001:326.675,113.385:0.0,0.0:0.0410663,0.409397,0.549689
+chr1	9517848	.	ATTTATTTATTT	ATTTATTT	.	.	END=9517859;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:27:0.998884:2,3:2-2,2-3:12,15,0,0:2,10|3,2:NULL:190.032:366.612,131.36:0.0,0.46122:0.00112286,0.998883,1.13057e-29	0/0:26:0.98931:3,3:3-3,3-3:11,15,0,0:3,11:NULL:186.743:326.675,113.385:0.19802,0.19802:5.67931e-35,0.00761143,0.992408
+chr1	9522426	.	TTTGTTTGTTTG	.	.	.	END=9522437;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,9,0,2:3,21:2,1|3,1:178.619:366.612,131.36:0.0,0.0:0.0,6.71013e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:216.985:326.675,113.385:0.0,0.0:0.0,1.61937e-07,1.0
+chr1	9525101	.	CACACACACACACACACA	.	.	.	END=9525118;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.990074:9,9:8-9,8-9:17,8,0,2:8,2|9,15:7,1|9,1:166.143:366.612,131.36:0.311527,0.311527:1.00911e-29,0.00990056,0.99012	0/0:28:0.998546:9,9:9-9,9-9:13,12,0,3:9,13:4,2|8,1:190.377:326.675,113.385:0.0,0.0:6.30261e-22,0.000801553,0.999202
+chr1	9525246	.	ATGAATGAATGAATGAATGAATGA	.	.	.	END=9525269;RU=atga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:27,10,0,2:6,27:3,1|5,1:211.986:366.612,131.36:0.0990099,0.0990099:0.0,4.27536e-08,1.0	0/0:34:0.999832:6,6:5-6,5-6:16,14,0,3:6,16:3,1|5,2:213.876:326.675,113.385:0.345543,0.345543:1e-45,0.000123183,0.999879
+chr1	9525501	.	AAACAAACAAACAAAC	.	.	.	END=9525516;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.99998:4,4:4-4,4-4:18,10,0,6:4,18:2,2|3,4:207.534:366.612,131.36:0.0,0.0:0.0,1.20039e-05,0.999987	0/0:32:0.999956:4,4:4-4,4-4:17,10,0,5:4,17:2,1|3,4:196.242:326.675,113.385:0.0,0.0:0.0,2.47553e-05,0.999978
+chr1	9525744	.	GAGGAGGAGGAG	.	.	.	END=9525755;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:205.735:366.612,131.36:0.0,0.0:0.0,1.90918e-06,1.0	0/0:35:0.999892:4,4:4-4,4-4:16,17,0,2:4,16:3,2:236.803:326.675,113.385:0.0,0.0:0.0,6.3783e-05,0.99994
+chr1	9526193	.	AAACAAACAAACAAAC	.	.	.	END=9526208;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999704:4,4:4-4,4-4:15,24,0,3:4,15:3,3:303.015:366.612,131.36:0.0,0.0:0.0,0.000129205,0.999872	0/0:22:0.991715:4,4:4-4,4-4:11,11,0,0:4,11:NULL:144.452:326.675,113.385:0.0,0.0:3.33123e-34,0.00610614,0.99391
+chr1	9526390	.	AAATAAATAAAT	.	.	.	END=9526401;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:222.351:366.612,131.36:0.0,0.0:0.0,3.88531e-08,1.0	0/0:24:0.999751:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.747:326.675,113.385:0.0,0.0:0.0,0.000140297,0.999864
+chr1	9529332	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC	.	.	END=9529373;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.488687:17,18:7-18,7-18:10,10,0,4:16,2|17,2|18,6:10,2|12,1|15,1:172.994:366.612,131.36:4.96592,5.25089:0.99975,0.0002516,4.76555e-21	0/0:35:0.68762:21,21:20-21,20-21:8,14,0,13:20,2|21,6:8,2|10,3|11,1|12,2|13,1|15,2|18,1|20,1:277.011:326.675,113.385:0.382696,0.382696:1.44107e-06,0.28187,0.718132
+chr1	9533361	.	AGAGAGAGAGAG	.	.	.	END=9533372;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:6,6:6-7,6-7:24,11,0,0:6,24:NULL:197.143:366.612,131.36:0.253975,0.253975:0.0,5.50644e-07,1.0	0/0:33:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:193.621:326.675,113.385:0.0,0.0:0.0,8.066e-06,0.999994
+chr1	9533849	.	AAATAAATAAAT	.	.	.	END=9533860;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:229.092:366.612,131.36:0.0,0.0:0.0,9.41042e-07,1.0	0/0:17:0.994368:3,3:3-3,3-3:11,6,0,0:3,11:NULL:102.525:326.675,113.385:0.0,0.0:1.5121e-35,0.00279059,0.997216
+chr1	9536352	.	CCCACCCACCCA	CCCA	.	.	END=9536363;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.222461:1,1:1-2,1-2:0,41,0,0:NULL:NULL:368.316:366.612,131.36:0.236383,0.236383:0.544329,0.393009,0.0628117	0/0:32:0.999949:3,3:3-3,3-3:17,15,0,0:3,17:NULL:211.421:326.675,113.385:0.0,0.0:0.0,4.53939e-05,0.999956
+chr1	9536489	.	TGGAGCTGGAGCTGGAGC	.	.	.	END=9536506;RU=tggagc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:3,3:3-3,3-3:27,33,0,2:3,27:2,2:415.135:366.612,131.36:0.0,0.0:0.0,4.20734e-08,1.0	0/0:29:1.0:3,3:3-3,3-3:23,4,0,2:3,23:2,2:141.472:326.675,113.385:0.0,0.0:0.0,3.16403e-07,1.0
+chr1	9541751	.	TATATTATATTATAT	.	.	.	END=9541765;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:175.287:366.612,131.36:0.0,0.0:0.0,9.08982e-08,1.0	0/0:18:0.999729:3,3:3-3,3-3:15,3,0,0:3,15:NULL:84.3241:326.675,113.385:0.0,0.0:1e-45,0.000132508,0.999871
+chr1	9542204	.	TATTTATTTATTTATT	.	.	.	END=9542219;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.99959:4,4:4-4,4-4:14,21,0,2:4,14:2,1|3,1:259.97:366.612,131.36:0.0,0.0:2.57224e-40,0.00025296,0.99975	0/0:30:0.999828:4,4:4-4,4-4:16,12,0,2:4,16:3,2:187.136:326.675,113.385:0.0,0.0:3e-45,0.000103024,0.999896
+chr1	9544492	.	AAACAAACAAAC	.	.	.	END=9544503;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999924:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.571:366.612,131.36:0.0,0.0:0.0,5.20927e-05,0.999949	0/0:29:0.999936:3,3:3-3,3-3:17,12,0,0:3,17:NULL:171.869:326.675,113.385:0.0,0.0:0.0,4.52417e-05,0.999956
+chr1	9544579	.	AAATAAATAAAT	AAATAAATAAATAAAT	.	.	END=9544590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.95751:4,4:4-4,4-4:8,15,0,0:4,8:NULL:169.733:366.612,131.36:0.0,0.0:1.14659e-30,0.0221433,0.9779	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.482:326.675,113.385:0.0,0.0:0.0,4.78866e-07,1.0
+chr1	9544631	.	CAAACAAACAAACAAACAAA	CAAACAAACAAA	.	.	END=9544650;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.858271:3,3:3-3,3-3:6,8,0,0:3,6:NULL:96.7295:366.612,131.36:0.0,0.0:0.957888,0.0421824,2.13894e-21	0/0:30:0.999989:5,5:5-5,5-5:17,8,0,5:5,17:3,1|4,4:180.185:326.675,113.385:0.0,0.0:4e-45,1.66117e-05,0.999986
+chr1	9550027	.	AGGCAGGCTGAGGCAGGCTGAGGCAGGCTG	.	.	.	END=9550056;RU=aggcaggctg;PERIOD=10;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999978:3,3:3-3,3-3:19,18,0,3:3,19:2,3:258.204:366.612,131.36:0.0,0.0:9.2709e-24,3.21158e-05,0.999971	0/0:22:0.991697:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.68:326.675,113.385:0.0,0.0:3.84619e-14,0.00708497,0.992933
+chr1	9551002	.	TGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGT	.	.	END=9551022;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.0:5,5:5-5,5-5:18,17,0,2:5,18:4,1|5,1:236.622:366.612,131.36:0.0,0.0:0.999995,5.00637e-06,0.0	0/0:46:1.0:7,7:7-7,7-7:30,12,0,4:7,30:3,1|4,1|5,1|6,1:257.203:326.675,113.385:0.0,0.0:0.0,4.08431e-09,1.0
+chr1	9551523	.	GAAAGAAAGAAA	.	.	.	END=9551534;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:239.44:366.612,131.36:0.0,0.0:0.0,4.80066e-06,0.999995	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.768:326.675,113.385:0.0,0.0:0.0,1.69865e-06,1.0
+chr1	9553997	.	ACAGACAGACAG	.	.	.	END=9554008;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:243.212:366.612,131.36:0.0,0.0:0.0,1.54342e-06,1.0	0/0:25:0.999424:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.558:326.675,113.385:0.0,0.0:0.0,0.000310663,0.99969
+chr1	9555100	.	CATACATACATACATA	.	.	.	END=9555115;RU=cata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:4,4:4-4,4-4:21,18,0,3:4,21:2,1|3,2:272.614:366.612,131.36:0.0,0.0:0.0,3.50491e-06,1.0	0/0:43:1.0:4,4:4-4,4-4:28,11,0,4:4,28:3,4:240.061:326.675,113.385:0.0,0.0:0.0,7.57256e-09,1.0
+chr1	9557814	.	AGGCAGGCAGGC	.	.	.	END=9557825;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:288.198:366.612,131.36:0.0,0.0:0.0,1.93264e-07,1.0	0/0:49:1.0:3,3:3-3,3-3:28,19,0,2:3,28:2,2:303.728:326.675,113.385:0.0,0.0:0.0,2.70369e-08,1.0
+chr1	9559035	.	TTTATTTATTTA	.	.	.	END=9559046;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:19,18,0,0:3,19:NULL:237.608:366.612,131.36:0.0,0.0:0.0,9.02066e-06,0.999994	0/0:29:0.999997:3,3:2-3,2-3:18,8,0,2:3,18:2,2:159.677:326.675,113.385:0.253975,0.253975:0.0,9.92915e-06,0.999993
+chr1	9559216	.	CTATCTATCTAT	.	.	.	END=9559227;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998311:3,3:3-3,3-3:12,13,0,0:3,12:NULL:166.195:366.612,131.36:0.0,0.0:5.86568e-39,0.00103494,0.998968	0/0:20:0.99055:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.843:326.675,113.385:0.0,0.0:1.5807e-32,0.00583339,0.994181
+chr1	9559239	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=9559262;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998634:4,4:4-4,4-4:12,9,0,4:4,12:3,4:160.987:366.612,131.36:0.0,0.0:8.31654e-36,0.000721811,0.99928	0/0:24:0.975961:4,4:4-4,4-4:9,12,0,3:4,9:2,2|3,1:166.59:326.675,113.385:0.0,0.0:1.77814e-26,0.0163539,0.983681
+chr1	9561161	.	AAAGAAAGAAAG	.	.	.	END=9561172;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:251.128:366.612,131.36:0.0,0.0:0.0,3.12008e-06,1.0	0/0:30:0.999957:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.958:326.675,113.385:0.0,0.0:0.0,3.4985e-05,0.999964
+chr1	9567718	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9567759;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.368352:22,30:22-22,22-31:6,12,0,12:22,6:5,1|9,3|11,1|12,1|15,1|17,1|19,1|20,2|30,1:247.171:366.612,131.36:0.0,4.05102:7.66898e-17,7.24313e-08,1.0	0/0:54:0.998695:21,21:18-21,18-21:16,17,0,18:21,16:4,1|5,1|7,4|8,2|9,2|10,1|11,3|12,1|13,1|16,1|19,1:371.306:326.675,113.385:0.712046,0.712046:2.3557e-18,0.000297949,0.999705
+chr1	9569212	.	GTGGTGGTGGTG	.	.	.	END=9569223;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.997553:4,4:4-4,4-4:12,17,0,2:4,12:3,2:224.309:366.612,131.36:0.0,0.0:7.40471e-33,0.00122997,0.998777	0/0:30:0.991951:4,4:4-4,4-4:11,19,0,0:4,11:NULL:216.225:326.675,113.385:0.0,0.0:2.08963e-30,0.00592683,0.99409
+chr1	9571015	.	AAAGGAAAGGAAAGG	.	.	.	END=9571029;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.984032:3,3:3-3,3-3:10,27,0,0:3,10:NULL:289.309:366.612,131.36:0.0,0.0:5.75521e-33,0.0138028,0.986229	0/0:35:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.53:326.675,113.385:0.0,0.0:0.0,2.13318e-05,0.999979
+chr1	9571032	.	AAAGGAAAGGAAAGG	.	.	.	END=9571046;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999745:3,3:3-3,3-3:15,22,0,2:3,15:2,2:276.457:366.612,131.36:0.0,0.0:0.0,0.000159529,0.999842	0/0:36:0.999955:3,3:3-3,3-3:17,16,0,3:3,17:2,3:239.298:326.675,113.385:0.0,0.0:0.0,3.66339e-05,0.999964
+chr1	9571264	.	AGATTAGATTAGATTAGATT	.	.	.	END=9571283;RU=agatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999969:4,4:4-4,4-4:19,17,0,0:4,19:NULL:235.226:366.612,131.36:0.0,0.0:0.0,4.0984e-05,0.999963	0/0:40:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:246.326:326.675,113.385:0.0,0.0:0.0,1.61577e-06,1.0
+chr1	9571292	.	CATACATACATA	.	.	.	END=9571303;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999992:3,3:3-3,3-3:19,17,0,0:3,19:NULL:234.857:366.612,131.36:0.0,0.0:0.0,1.7738e-05,0.999986	0/0:30:0.999841:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.408:326.675,113.385:0.0,0.0:4.61e-43,0.000103159,0.999896
+chr1	9571354	.	GATTGATTGATT	.	.	.	END=9571365;RU=gatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.995849:3,3:3-3,3-3:11,15,0,2:3,11:2,2:198.858:366.612,131.36:0.0,0.0:5.99504e-37,0.00180972,0.998194	0/0:32:0.999991:3,3:3-3,3-3:18,12,0,2:3,18:2,2:191.128:326.675,113.385:0.0,0.0:0.0,1.34985e-05,0.999987
+chr1	9575481	.	TGGTGGTGGTGG	.	.	.	END=9575492;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:29,21,0,0:4,29:NULL:308.213:366.612,131.36:0.0,0.0:0.0,2.5531e-08,1.0	0/0:51:1.0:4,4:4-4,4-4:28,23,0,0:4,28:NULL:322.028:326.675,113.385:0.0,0.0:0.0,2.93502e-08,1.0
+chr1	9579567	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9579598;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.286408:16,21:16-16,16-24:18,13,0,13:15,3|16,15:6,1|10,1|11,3|13,3|14,3|15,1|21,1:314.996:366.612,131.36:0.0,3.20612:3.07634e-19,3.561e-05,0.999964	0/0:33:0.865572:16,16:15-16,15-16:18,7,0,8:15,5|16,13:7,2|9,1|11,1|13,2|15,1|16,1:210.355:326.675,113.385:0.442564,0.442564:1.78213e-20,0.13442,0.865673
+chr1	9579965	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9579994;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.881122:15,15:13-17,13-17:6,20,0,13:15,6:4,1|7,2|9,1|10,1|11,3|12,1|13,1|14,2|15,1:306.867:366.612,131.36:1.01087,1.01087:1.33388e-15,0.0251713,0.974879	0/0:25:0.982053:15,15:14-15,14-15:15,3,0,7:14,2|15,13:6,1|10,2|11,1|13,2|14,1:151.138:326.675,113.385:0.236383,0.236383:1.49043e-14,0.0174023,0.982635
+chr1	9579994	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=9580031;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:29:0.999525:17,19:16-17,16-19:13,10,0,4:16,3|17,6|19,4:5,3|10,1:195.896:366.612,131.36:0.21692,0.801063:4.20143e-06,0.999996,2.77594e-06	0/0:22:0.999096:19,19:19-19,19-19:15,2,0,5:19,15:15,1|16,1|17,2|18,1:125.664:326.675,113.385:0.0,0.0:2.3307e-29,0.000121848,0.99988
+chr1	9582597	.	CCTCCTCCTCCT	.	.	.	END=9582608;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.882089:4,4:4-4,4-4:7,21,0,0:4,7:NULL:219.266:366.612,131.36:0.29703,0.29703:6.7549e-21,0.0953619,0.904739	0/0:31:0.999283:4,4:4-4,4-4:13,16,0,2:4,13:3,2:218.782:326.675,113.385:0.0,0.0:9.46324e-39,0.00046551,0.999537
+chr1	9583195	.	AAATAAATAAATAAAT	.	.	.	END=9583210;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999814:4,4:4-4,4-4:15,13,0,5:4,15:2,1|3,4:206.943:366.612,131.36:0.0,0.0:0.0,8.99761e-05,0.999911	0/0:27:0.999477:4,4:3-5,3-5:14,7,0,4:4,14:3,4:143.282:326.675,113.385:0.633818,0.633818:4.2e-44,0.000160403,0.999842
+chr1	9583659	.	AACCAACCAACC	.	.	.	END=9583670;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.997728:3,3:3-3,3-3:12,15,0,0:3,12:NULL:186.758:366.612,131.36:0.0,0.0:9.2434e-41,0.00143367,0.998572	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:176.01:326.675,113.385:0.0,0.0:0.0,1.07304e-06,1.0
+chr1	9585234	.	AGAGAGAGAGAG	.	.	.	END=9585245;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:6,6:6-6,6-6:35,15,0,2:6,35:4,1|5,1:293.376:366.612,131.36:0.0,0.0:0.0,1.1327e-10,1.0	0/0:31:0.999978:6,6:6-7,6-7:18,12,0,0:6,18:NULL:181.935:326.675,113.385:0.236383,0.236383:4.664e-42,3.27745e-05,0.99997
+chr1	9587125	.	TAAATAAATAAA	.	.	.	END=9587136;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999965:3,3:3-3,3-3:18,22,0,0:3,18:NULL:276.885:366.612,131.36:0.0,0.0:0.0,2.96693e-05,0.999971	0/0:36:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:204.769:326.675,113.385:0.0,0.0:0.0,4.47188e-07,1.0
+chr1	9588885	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9588932;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:33:0.276794:24,32:24-24,24-32:7,10,0,16:24,7:4,1|6,1|7,2|8,1|9,2|16,2|20,3|21,3|29,1:255.89:366.612,131.36:0.0,3.61865:4.9677e-15,1.70444e-07,1.0	0/0:36:0.776549:24,24:23-25,23-25:9,10,0,16:23,2|24,7:8,2|11,1|12,2|13,2|14,3|15,3|16,1|18,1|21,1:266.77:326.675,113.385:0.532817,0.532817:2.4315e-08,0.173489,0.826583
+chr1	9591730	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9591759;RU=tc;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:6:0.021554:14,14:12-14,12-14:0,2,0,2:NULL:10,1|12,1:34.2186:366.612,131.36:0.947603,0.947603:0.348761,0.49392,0.157365	1/1:8:0.025942:12,12:12-15,12-15:0,5,0,2:NULL:6,1|8,1:58.7703:326.675,113.385:1.46059,1.46059:0.206663,0.496322,0.297103
+chr1	9591759	.	CACACACACACACACA	.	.	.	END=9591774;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.847064:8,8:8-13,8-13:7,2,0,0:8,7:NULL:47.2816:366.612,131.36:2.19962,2.19962:7.07238e-10,0.0476111,0.952465	0/0:12:0.930569:8,8:7-8,7-8:8,3,0,0:8,8:NULL:59.1515:326.675,113.385:0.35561,0.35561:3.91321e-11,0.0389658,0.961101
+chr1	9591774	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=9591823;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.0191554:25,25:25-30,25-30:0,2,0,4:NULL:7,1|10,1|11,1|16,1:50.299:366.612,131.36:0.949876,0.949876:0.0,0.0,1.0	0/0:10:0.178814:25,25:22-25,22-25:2,3,0,4:25,2:5,1|10,1|12,1|17,1:67.505:326.675,113.385:0.707349,0.707349:0.00626058,0.457123,0.53674
+chr1	9600354	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9600391;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.859315:19,19:19-20,19-20:15,12,0,11:18,2|19,11|20,2:8,1|9,1|12,1|13,1|14,3|16,2|17,1|18,1:276.718:366.612,131.36:0.436093,0.436093:2.62061e-13,0.00978464,0.990238	0/1:32:0.849525:19,20:18-19,18-20:13,6,0,12:18,2|19,8|20,3:4,2|6,2|7,1|13,1|14,2|15,1|16,2|18,1:220.619:326.675,113.385:0.169767,0.620058:1.20253e-11,0.00373575,0.996277
+chr1	9600392	.	AGAGAGAGAGAGAGAGAG	.	.	.	END=9600409;RU=ag;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999913:9,9:9-9,9-9:17,11,0,2:9,17:6,1|8,1:188.881:366.612,131.36:0.0,0.0:1.12396e-34,5.29395e-05,0.999949	0/0:32:0.999832:9,9:8-9,8-9:23,7,0,2:8,2|9,21:6,1|9,1:179.499:326.675,113.385:0.195027,0.195027:0.0,0.000174119,0.999827
+chr1	9601375	.	AAGAAAGAAAGAAAGAAAGA	AAGAAAGAAAGAAAGAAAGAAAGA	.	.	END=9601394;RU=aaga;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.999322:6,6:6-6,6-6:14,10,0,4:6,14:2,1|4,1|5,2:177.803:366.612,131.36:0.0,0.0:0.0,6.95015e-05,0.999933	0/0:25:0.999919:5,5:5-5,5-5:17,6,0,2:5,17:2,1|4,1:142.303:326.675,113.385:0.0,0.0:1.65e-43,3.54743e-05,0.999964
+chr1	9606362	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9606389;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.936713:13,13:12-13,12-13:15,21,0,8:12,3|13,12:6,1|8,2|10,1|11,2|12,1|13,1:322.203:366.612,131.36:0.390807,0.390807:0.99962,0.000382853,3.60786e-14	0/0:54:0.999707:14,14:14-14,14-14:27,15,0,11:13,4|14,23:6,1|8,1|9,1|11,1|12,3|13,4:351.894:326.675,113.385:0.139319,0.139319:1.02861e-27,0.000300045,0.999704
+chr1	9608925	.	AAAACAAAACAAAACAAAAC	.	.	.	END=9608944;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998729:4,4:4-4,4-4:12,9,0,7:4,12:2,1|3,6:179.669:366.612,131.36:0.0,0.0:8.2591e-41,0.000420259,0.999583	0/0:22:0.999873:4,4:4-4,4-4:16,3,0,3:4,16:2,1|3,2:111.98:326.675,113.385:0.0,0.0:0.0,4.67673e-05,0.999956
+chr1	9611150	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9611195;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.797661:23,23:22-23,22-23:7,22,0,15:23,7:4,1|7,1|9,2|10,1|11,1|16,2|17,2|18,1|19,1|20,1|22,2:357.74:366.612,131.36:0.422855,0.422855:1.38107e-07,0.116839,0.883262	0/0:40:0.994831:23,23:23-24,23-24:13,10,0,15:23,13:4,1|8,1|9,1|10,1|13,1|14,1|16,2|18,2|20,4|22,1:271.859:326.675,113.385:0.344691,0.344691:1.28818e-14,0.00110153,0.9989
+chr1	9612365	.	AAACAAACAAAC	.	.	.	END=9612376;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:33,20,0,0:3,33:NULL:315.123:366.612,131.36:0.0,0.0:0.0,6.36956e-10,1.0	0/0:41:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:257.034:326.675,113.385:0.0,0.0:0.0,1.22239e-06,1.0
+chr1	9615067	.	AAGGAAAGGAAAGGA	.	.	.	END=9615081;RU=aagga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.99992:3,3:3-3,3-3:17,3,0,0:3,17:NULL:97.9314:366.612,131.36:0.0,0.0:0.0,4.50181e-05,0.999956	0/0:20:0.994808:3,3:3-3,3-3:11,9,0,0:3,11:NULL:125.05:326.675,113.385:0.0,0.0:8.87133e-32,0.0033707,0.99664
+chr1	9615435	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9615462;RU=tg;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.691524:19,20:18-20,20-20:10,17,0,14:18,2|19,2|20,6:5,1|6,1|8,1|9,1|10,3|12,2|13,1|14,1|16,1|19,2:319.502:366.612,131.36:0.800696,0.19802:0.0,0.0,1.0	0/0:43:0.988039:14,14:13-14,13-14:17,8,0,16:13,3|14,14:5,2|6,4|7,2|8,1|9,2|10,1|11,2|12,2:282.1:326.675,113.385:0.284901,0.284901:8.18095e-17,0.0116994,0.988324
+chr1	9615830	.	ACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=9615845;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.995308:16,16:16-16,16-16:12,20,0,4:16,12:5,1|6,1|12,1|14,1:265.114:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:41:1.0:8,8:8-8,8-8:25,14,0,0:8,25:NULL:232.466:326.675,113.385:0.0990099,0.0990099:2.2519e-41,6.3841e-07,1.0
+chr1	9618148	.	GTTTTGTGTTTTGTGTTTTGT	.	.	.	END=9618168;RU=gttttgt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999203:3,3:3-3,3-3:14,10,0,0:3,14:NULL:143.662:366.612,131.36:0.0,0.0:3e-44,0.000537251,0.999468	0/0:32:0.999542:3,3:3-3,3-3:15,17,0,0:3,15:NULL:215.623:326.675,113.385:0.0,0.0:0.0,0.000414123,0.99959
+chr1	9618314	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9618343;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.977343:8,17:8-17,17-17:7,13,0,3:8,2|17,5:6,1|8,1|15,1:183.5:366.612,131.36:1.70101,0.0990099:1.20571e-18,1.0,2.71908e-08	0/0:28:0.398018:15,15:6-16,6-16:7,9,0,9:14,2|15,5:4,3|5,2|6,1|7,1|12,2:195.299:326.675,113.385:4.2295,4.2295:1.62833e-05,0.564795,0.435288
+chr1	9622730	.	CCATCCATCCAT	.	.	.	END=9622741;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:19,21,0,0:3,19:NULL:267.1:366.612,131.36:0.0,0.0:0.0,8.51368e-06,0.999994	0/0:39:0.449397:3,3:2-3,2-3:20,17,0,2:2,2|3,18:2,2:263.617:326.675,113.385:0.484441,0.484441:0.0,0.550717,0.449392
+chr1	9623134	.	AAACAAACAAAC	.	.	.	END=9623145;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:27,22,0,0:3,27:NULL:308.672:366.612,131.36:0.0,0.0:0.0,3.99432e-08,1.0	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:247.555:326.675,113.385:0.0,0.0:0.0,1.54894e-07,1.0
+chr1	9626974	.	TGTGTGTGTGTG	.	.	.	END=9626985;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999554:6,6:6-6,6-6:15,12,0,0:6,15:NULL:165.631:366.612,131.36:0.0,0.0:8.9785e-38,0.000244724,0.999758	0/0:22:0.997736:6,6:6-6,6-6:12,8,0,2:6,12:4,2:138.635:326.675,113.385:0.0,0.0:2.33487e-30,0.00106104,0.998944
+chr1	9629064	.	ACACACACACACAC	.	.	.	END=9629077;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999739:7,7:7-7,7-7:15,27,0,0:7,15:NULL:303.9:366.612,131.36:0.0,0.0:1.9304e-36,0.000198213,0.999804	0/0:39:1.00001:7,7:7-7,7-7:22,17,0,0:7,22:NULL:239.609:326.675,113.385:0.0,0.0:0.0,2.05518e-06,1.0
+chr1	9630961	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9630988;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0278896:21,21:21-25,21-25:0,7,0,2:NULL:10,1|17,1:77.7278:366.612,131.36:0.885682,0.885682:0.0,0.0,1.0	0/0:20:0.911054:14,14:12-15,12-15:8,7,0,2:14,8:8,1|13,1:116.934:326.675,113.385:0.670203,0.670203:4.68467e-11,0.036892,0.963175
+chr1	9632449	.	TATTTATTTATT	.	.	.	END=9632460;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99891:3,3:3-3,3-3:13,18,0,0:3,13:NULL:219.01:366.612,131.36:0.0,0.0:5.5e-44,0.000874406,0.999127	0/0:23:0.999721:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.398:326.675,113.385:0.0,0.0:0.0,0.000167424,0.999834
+chr1	9638514	.	ACATACATACAT	.	.	.	END=9638525;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:24,17,0,0:3,24:NULL:253.993:366.612,131.36:0.0,0.0:0.0,3.71575e-07,1.0	0/0:44:1.0:3,3:3-3,3-3:27,13,0,4:3,27:2,4:249.201:326.675,113.385:0.0,0.0:0.0,1.83583e-08,1.0
+chr1	9640123	.	TAAATAAATAAA	.	.	.	END=9640134;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:69:1.0:3,3:3-3,3-3:48,20,0,0:3,48:NULL:378.221:366.612,131.36:0.0,0.0:0.0,5.36149e-14,1.0	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:334.737:326.675,113.385:0.0,0.0:0.0,9.27498e-09,1.0
+chr1	9643772	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9643803;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:43:0.99998:17,18:17-17,18-18:21,14,0,6:16,2|17,11|18,8:6,1|10,1|11,1|14,1|16,1|18,1:283.602:366.612,131.36:0.220506,0.0990099:0.0,1.0533e-10,1.0	1/0:35:0.76529:14,16:10-16,16-16:14,11,0,8:13,2|14,2|15,2|16,8:5,1|7,1|8,1|10,1|11,1|12,1|13,1|14,1:240.834:326.675,113.385:1.4234,0.60323:8.8141e-09,0.975704,0.0243449
+chr1	9646643	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=9646702;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.255423:14,14:9-14,9-14:3,12,0,6:14,3:3,1|5,1|6,1|7,1|8,1|13,1:164.828:366.612,131.36:1.61079,1.61079:0.876379,0.123719,5.4977e-07	0/2:18:0.314643:15,17:15-15,15-20:5,7,0,6:15,5:4,1|6,1|7,1|12,1|14,1|17,1:138.479:326.675,113.385:0.0,1.42485:3.16289e-17,5.02754e-08,1.0
+chr1	9647869	.	AAAACAAAACAAAAC	.	.	.	END=9647883;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999978:3,3:3-3,3-3:19,19,0,0:3,19:NULL:252.99:366.612,131.36:0.0,0.0:0.0,3.05267e-05,0.999971	0/0:42:1.0:3,3:3-3,3-3:29,13,0,0:3,29:NULL:236.008:326.675,113.385:0.0,0.0:0.0,1.02047e-08,1.0
+chr1	9648036	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9648079;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.521603:27,27:26-27,26-27:4,16,0,20:27,4:7,1|8,2|9,1|12,2|13,2|14,1|15,1|16,3|17,2|19,3|20,2:326.497:366.612,131.36:0.508722,0.508722:0.0,0.0,1.0	0/0:56:0.953332:22,22:21-22,21-22:17,20,0,19:21,5|22,12:5,3|6,1|9,3|10,1|13,1|14,1|15,3|16,1|17,1|18,1|19,1|21,1|22,1:429.358:326.675,113.385:0.298675,0.298675:1.24157e-18,0.0456814,0.954391
+chr1	9648525	.	AACAACAACAACAAC	.	.	.	END=9648539;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:5,5:5-5,5-5:25,18,0,3:5,25:4,3:283.272:366.612,131.36:0.139319,0.139319:0.0,1.49358e-07,1.0	0/0:31:0.999979:5,5:5-5,5-5:18,11,0,2:5,18:4,2:186.423:326.675,113.385:0.0,0.0:0.0,1.53856e-05,0.999986
+chr1	9649233	.	AGCAGCAGCAGCAGCAGC	.	.	.	END=9649250;RU=agc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:210.823:366.612,131.36:0.0,0.0:0.0,9.54899e-09,1.0	0/0:33:1.0:6,6:6-6,6-6:24,5,0,4:6,24:5,4:171.0:326.675,113.385:0.0,0.0:0.0,1.31746e-07,1.0
+chr1	9649872	.	AGACAGACAGAC	.	.	.	END=9649883;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999951:3,3:3-3,3-3:17,15,0,0:3,17:NULL:206.542:366.612,131.36:0.0,0.0:0.0,3.27145e-05,0.999971	0/0:40:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:246.077:326.675,113.385:0.0,0.0:0.0,1.99257e-06,1.0
+chr1	9650822	.	AGGCAGGCAGGC	.	.	.	END=9650833;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:252.446:366.612,131.36:0.0,0.0:0.0,6.37642e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:241.716:326.675,113.385:0.0,0.0:0.0,2.43994e-08,1.0
+chr1	9653697	.	AATTAATTAATT	.	.	.	END=9653708;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:163.635:366.612,131.36:0.0,0.0:0.0,5.9558e-06,0.999995	0/0:35:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:210.987:326.675,113.385:0.0,0.0:0.0,1.87657e-06,1.0
+chr1	9654181	.	ACACACACACACACAC	.	.	.	END=9654196;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:8,8:6-8,6-8:23,15,0,2:8,23:5,1|6,1:243.973:366.612,131.36:0.451337,0.451337:2.0842e-41,1.49445e-06,1.0	0/0:39:0.998193:8,8:8-9,8-9:29,6,0,4:8,26|9,3:5,2|6,1|7,1:220.67:326.675,113.385:0.345543,0.345543:0.0,1.40534e-08,1.0
+chr1	9654418	.	TGTTTGTTTGTT	.	.	.	END=9654429;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:27,24,0,0:3,27:NULL:331.579:366.612,131.36:0.0,0.0:0.0,9.52743e-08,1.0	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:246.432:326.675,113.385:0.0,0.0:0.0,3.09154e-07,1.0
+chr1	9657317	.	TAGGTAGGTAGGTAGG	.	.	.	END=9657332;RU=tagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999952:4,4:4-4,4-4:18,13,0,0:4,18:NULL:197.062:366.612,131.36:0.0,0.0:0.0,5.66923e-05,0.999947	0/0:29:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:158.96:326.675,113.385:0.0,0.0:0.0,3.75096e-06,1.0
+chr1	9657503	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=9657520;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999909:9,9:9-10,9-10:17,11,0,3:9,17:6,1|8,2:198.971:366.612,131.36:0.169767,0.169767:6.39357e-30,4.71416e-05,0.999955	0/0:32:0.9955:9,9:8-10,8-10:22,5,0,4:8,2|9,18|10,2:5,2|8,2:180.788:326.675,113.385:0.487064,0.487064:2.29285e-31,0.000320013,0.999682
+chr1	9657524	.	GACAGACAGACA	.	.	.	END=9657535;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-4,3-4:21,10,0,2:3,21:2,2:193.092:366.612,131.36:0.334882,0.334882:0.0,1.46363e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:23,5,0,2:3,23:2,2:150.605:326.675,113.385:0.0,0.0:0.0,3.26794e-07,1.0
+chr1	9658926	.	CCCACCCCCACCCCCACC	.	.	.	END=9658943;RU=cccacc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.902147:3,3:3-3,3-3:7,25,0,0:3,7:NULL:252.469:366.612,131.36:0.278639,0.278639:4.55821e-21,0.0822109,0.917883	0/0:27:0.951281:3,3:3-3,3-3:8,19,0,0:3,8:NULL:214.396:326.675,113.385:0.19802,0.19802:5.9391e-24,0.0431802,0.95689
+chr1	9659382	.	GGTTGGTTGGTTGGTT	.	.	.	END=9659397;RU=ggtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:25,21,0,5:4,25:2,1|3,4:322.734:366.612,131.36:0.0,0.0:0.0,1.41532e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:235.149:326.675,113.385:0.0,0.0:0.0,8.22004e-08,1.0
+chr1	9660032	.	AATTAATTAATT	AATTAATT	.	.	END=9660043;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:17:1.0:2,3:2-3,1-3:4,13,0,0:2,2|3,2:NULL:139.697:366.612,131.36:0.309,0.439006:2.25175e-06,1.0,1.67431e-06	0/0:12:0.962574:3,3:3-3,3-3:8,4,0,0:3,8:NULL:69.585:326.675,113.385:0.0,0.0:3.78813e-27,0.0192602,0.980778
+chr1	9661858	.	TATTTATTTATT	.	.	.	END=9661869;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:223.698:366.612,131.36:0.0,0.0:0.0,2.98853e-06,1.0	0/0:33:0.999909:3,3:3-3,3-3:16,13,0,4:3,16:2,4:212.817:326.675,113.385:0.0,0.0:0.0,5.11926e-05,0.999949
+chr1	9663095	.	CTTCTTCTTCTTCTT	.	.	.	END=9663109;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:4-5,4-5:20,8,0,3:5,20:3,1|4,2:176.232:366.612,131.36:0.169767,0.169767:0.0,3.18149e-06,1.0	0/0:37:1.00001:5,5:5-5,5-5:21,16,0,0:5,21:NULL:225.4:326.675,113.385:0.0,0.0:0.0,3.45165e-06,1.0
+chr1	9667084	.	GTGGGTGGGTGG	.	.	.	END=9667095;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:21,18,0,2:3,21:2,2:262.453:366.612,131.36:0.0,0.0:0.0,1.76325e-06,1.0	0/0:64:1.0:3,3:3-3,3-3:45,16,0,3:3,45:2,3:346.008:326.675,113.385:0.0,0.0:0.0,9.71045e-14,1.0
+chr1	9670565	.	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	.	.	END=9670612;RU=agagac;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.993949:9,9:9-9,9-9:10,23,0,11:9,10:3,1|4,2|5,2|6,2|7,2|8,2:338.596:366.612,131.36:0.0,0.0:0.0,0.00211497,0.99789	0/0:47:0.999883:8,8:8-8,8-8:16,20,0,11:8,16:2,1|3,2|4,4|5,1|7,3:323.809:326.675,113.385:0.0,0.0:1e-45,8.4119e-05,0.999918
+chr1	9671049	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9671068;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:21,10,0,8:4,21:2,2|3,6:229.649:366.612,131.36:0.0,0.0:0.0,1.28719e-06,1.0	0/0:28:0.999895:4,4:4-4,4-4:16,8,0,4:4,16:3,4:168.625:326.675,113.385:0.0,0.0:0.0,5.65325e-05,0.999947
+chr1	9677855	.	AATTAATTAATT	.	.	.	END=9677866;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.980491:3,3:3-3,3-3:9,13,0,0:3,9:NULL:154.314:366.612,131.36:0.0,0.0:7.7152e-31,0.0108427,0.98918	0/0:24:0.999993:3,3:3-3,3-3:19,5,0,0:3,19:NULL:121.778:326.675,113.385:0.0,0.0:0.0,1.26746e-05,0.999987
+chr1	9679931	.	TTAATTAATTAA	.	.	.	END=9679942;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:170.439:366.612,131.36:0.0,0.0:0.0,1.05695e-05,0.999993	0/0:23:0.999972:3,3:3-3,3-3:18,5,0,0:3,18:NULL:119.233:326.675,113.385:0.0,0.0:0.0,2.05989e-05,0.999979
+chr1	9680037	.	AAATAAATAAAT	.	.	.	END=9680048;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:161.662:366.612,131.36:0.0,0.0:0.0,2.71179e-06,1.0	0/0:15:0.920147:3,3:3-3,3-3:7,8,0,0:3,7:NULL:101.501:326.675,113.385:0.0,0.0:1.12079e-23,0.0432247,0.956847
+chr1	9682805	.	TTTGTTTTGTTTTGT	.	.	.	END=9682819;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:290.035:366.612,131.36:0.0,0.0:0.0,7.31982e-06,0.999994	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:212.141:326.675,113.385:0.0,0.0:0.0,9.4052e-07,1.0
+chr1	9683361	.	AAAACAAAACAAAAC	.	.	.	END=9683375;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:196.245:366.612,131.36:0.0,0.0:0.0,1.84855e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:256.143:326.675,113.385:0.0,0.0:0.0,5.61949e-08,1.0
+chr1	9687633	.	TCTTCTTCTTCT	.	.	.	END=9687644;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:4-4,4-4:31,21,0,2:4,31:3,2:326.845:366.612,131.36:0.0,0.0:0.0,2.87601e-09,1.0	0/0:44:1.0:4,4:4-4,4-4:20,22,0,2:4,20:3,2:285.82:326.675,113.385:0.0,0.0:0.0,6.53391e-06,0.999994
+chr1	9687930	.	CAACAACAACAACAA	.	.	.	END=9687944;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:5,5:5-5,5-5:20,15,0,2:5,20:4,2:235.364:366.612,131.36:0.0,0.0:0.0,4.26737e-06,0.999995	0/0:31:1.00001:5,5:5-5,5-5:22,7,0,2:5,22:4,2:168.444:326.675,113.385:0.0,0.0:0.0,1.00261e-06,1.0
+chr1	9688759	.	ATTATTATTATT	.	.	.	END=9688770;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999995:4,4:4-4,4-4:20,19,0,0:4,20:NULL:251.938:366.612,131.36:0.0,0.0:0.0,1.41438e-05,0.999987	0/0:33:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:181.887:326.675,113.385:0.0,0.0:0.0,1.26347e-06,1.0
+chr1	9688938	.	TTTGTTTGTTTG	.	.	.	END=9688949;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.991918:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.402:366.612,131.36:0.0,0.0:7.14483e-34,0.00501164,0.995002	0/0:34:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:193.646:326.675,113.385:0.0,0.0:0.0,1.62571e-06,1.0
+chr1	9689761	.	ACACACACACACACACACAC	.	.	.	END=9689780;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:0.999987:10,10:10-10,10-10:26,21,0,5:9,2|10,24:5,2|7,1|8,1|9,1:350.776:366.612,131.36:0.0990099,0.0990099:2.1023e-36,1.42608e-05,0.999987	0/0:57:0.999991:10,10:10-10,10-10:32,12,0,12:9,2|10,28|11,2:4,1|5,2|6,4|7,4|9,1:354.602:326.675,113.385:0.430892,0.430892:2.5e-44,2.95574e-07,1.0
+chr1	9691108	.	ATTTATTTATTT	.	.	.	END=9691119;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999878:3,3:3-3,3-3:16,10,0,0:3,16:NULL:149.003:366.612,131.36:0.0,0.0:0.0,6.04867e-05,0.999941	0/0:19:0.999853:3,3:3-3,3-3:16,3,0,0:3,16:NULL:89.7674:326.675,113.385:0.0,0.0:0.0,6.84543e-05,0.999933
+chr1	9691851	.	AGTAAGTAAGTAAGTA	.	.	.	END=9691866;RU=agta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:4,4:4-4,4-4:22,17,0,5:4,22:3,5:279.691:366.612,131.36:0.0,0.0:0.0,5.4925e-07,1.0	0/0:31:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:177.721:326.675,113.385:0.0,0.0:0.0,4.7318e-06,0.999995
+chr1	9694314	.	ATACATACATAC	.	.	.	END=9694325;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:219.473:366.612,131.36:0.0,0.0:0.0,1.13225e-06,1.0	0/0:38:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:208.619:326.675,113.385:0.0,0.0:0.0,7.87691e-08,1.0
+chr1	9695885	.	AAATAAATAAAT	.	.	.	END=9695896;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-4,3-4:20,20,0,3:3,20:2,3:284.861:366.612,131.36:0.345543,0.345543:0.0,6.69801e-06,0.999994	0/0:34:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:201.333:326.675,113.385:0.0,0.0:0.0,3.61883e-06,1.0
+chr1	9696536	.	AAATAAATAAAT	.	.	.	END=9696547;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:306.625:366.612,131.36:0.0,0.0:0.0,6.52315e-10,1.0	0/0:25:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:122.673:326.675,113.385:0.0,0.0:0.0,5.87155e-06,0.999995
+chr1	9699257	.	ACAACAACAACA	.	.	.	END=9699268;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:152.568:366.612,131.36:0.0,0.0:0.0,1.1249e-06,1.0	0/0:39:1.0:4,4:4-4,4-4:25,11,0,3:4,25:3,3:222.319:326.675,113.385:0.0,0.0:0.0,1.11363e-07,1.0
+chr1	9703468	.	AAACAAACAAAC	.	.	.	END=9703479;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999994:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.066:366.612,131.36:0.0,0.0:0.0,1.17266e-05,0.999987	0/0:19:0.996173:3,3:3-3,3-3:11,6,0,2:3,11:2,2:112.545:326.675,113.385:0.0,0.0:4.16261e-36,0.00136399,0.998641
+chr1	9703640	.	TTGTTGTTGTTG	.	.	.	END=9703651;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:234.651:366.612,131.36:0.0,0.0:0.0,1.66171e-06,1.0	0/0:25:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:125.859:326.675,113.385:0.0,0.0:0.0,9.80125e-06,0.999993
+chr1	9704060	.	TGGTTTTGGTTTTGGTTT	.	.	.	END=9704077;RU=tggttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999932:3,3:3-3,3-3:17,13,0,0:3,17:NULL:184.213:366.612,131.36:0.0,0.0:0.0,5.85795e-05,0.999941	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.201:326.675,113.385:0.0,0.0:0.0,5.56269e-06,0.999995
+chr1	9705815	.	GTTTGTTTGTTTGTTT	.	.	.	END=9705830;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.674159:4,4:2-4,2-4:5,15,0,0:4,5:NULL:158.217:366.612,131.36:0.477306,0.477306:2.98968e-17,0.236009,0.764015	0/0:26:0.999993:4,4:4-4,4-4:19,7,0,0:4,19:NULL:141.001:326.675,113.385:0.0,0.0:0.0,1.56908e-05,0.999986
+chr1	9710499	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=9710522;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.998341:4,4:4-4,4-4:12,12,0,4:4,12:3,4:185.253:366.612,131.36:0.0,0.0:0.999477,0.000525053,2.34701e-38	0/0:28:0.999938:6,6:6-6,6-6:18,7,0,3:6,18:2,2|3,1:160.473:326.675,113.385:0.0,0.0:0.0,4.24882e-05,0.999957
+chr1	9710692	.	TTTGTTTGTTTG	.	.	.	END=9710703;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99993:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.914:366.612,131.36:0.0,0.0:0.0,3.98414e-05,0.999963	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:139.644:326.675,113.385:0.0,0.0:0.0,4.75786e-06,0.999995
+chr1	9710885	.	ATTTATTTATTTATTT	.	.	.	END=9710900;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.71043:4,4:3-4,3-4:5,17,0,4:4,5:2,2|3,2:205.355:366.612,131.36:0.253975,0.253975:2.75459e-15,0.174742,0.825328	0/0:28:0.999157:4,4:4-4,4-4:13,10,0,5:4,13:3,5:177.402:326.675,113.385:0.0,0.0:4.21589e-40,0.000347666,0.999653
+chr1	9712334	.	TAAATAAATAAATAAATAAA	.	.	.	END=9712353;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999998:5,5:5-5,5-5:18,14,0,6:5,18:3,1|4,5:247.198:366.612,131.36:0.0,0.0:2.5e-44,1.03477e-05,0.999993	0/0:22:0.991102:5,5:5-5,5-5:10,10,0,2:5,10:4,2:149.796:326.675,113.385:0.0,0.0:1.02584e-24,0.00490215,0.995108
+chr1	9712678	.	TGTATGTATGTA	.	.	.	END=9712689;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:27,24,0,0:3,27:NULL:331.077:366.612,131.36:0.0,0.0:0.0,4.25356e-08,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.328:326.675,113.385:0.0,0.0:0.0,6.61577e-07,1.0
+chr1	9712838	.	GGCTGGCTGGCT	.	.	.	END=9712849;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:3,3:3-3,3-3:21,25,0,3:3,21:2,3:333.27:366.612,131.36:0.0,0.0:0.0,1.0754e-06,1.0	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:160.56:326.675,113.385:0.0,0.0:0.0,2.80029e-06,1.0
+chr1	9713883	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9713918;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.783324:29,30:29-30,29-30:5,16,0,21:29,2|30,3:4,1|5,1|6,1|8,1|9,2|10,1|12,1|13,1|14,1|15,1|16,1|18,1|19,4|24,1|25,1|27,1|28,1:338.818:366.612,131.36:0.582057,0.585081:0.0,0.0,1.0	0/0:35:0.634928:18,18:17-18,17-18:11,11,0,13:17,3|18,8:6,2|8,1|10,1|11,2|12,1|13,1|14,2|16,2|18,1:256.984:326.675,113.385:0.45695,0.45695:1.01629e-14,0.360848,0.639196
+chr1	9719437	.	TAAATAAATAAA	.	.	.	END=9719448;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:29,21,0,2:3,29:2,2:321.514:366.612,131.36:0.0,0.0:0.0,7.19871e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.708:326.675,113.385:0.0,0.0:0.0,3.85455e-07,1.0
+chr1	9725821	.	AAACAAACAAACAAACAAAC	.	.	.	END=9725840;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.98873:5,5:5-5,5-5:10,9,0,0:5,10:NULL:120.746:366.612,131.36:0.0,0.0:6.68574e-36,0.00721016,0.992806	0/0:26:0.999871:5,5:5-5,5-5:16,5,0,5:5,16:2,2|3,1|4,2:147.576:326.675,113.385:0.0,0.0:0.0,5.49581e-05,0.999948
+chr1	9725879	.	AATAAATAAATA	AATAAATAAATAAATA	.	.	END=9725890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.541156:4,4:3-4,3-4:4,12,0,0:4,4:NULL:121.68:366.612,131.36:0.326282,0.326282:8.05336e-16,0.185431,0.814632	0/0:23:0.999126:3,3:3-3,3-3:13,8,0,2:3,13:2,2:138.552:326.675,113.385:0.0,0.0:2.34e-43,0.000423082,0.999582
+chr1	9726064	.	ACAACAACAACA	.	.	.	END=9726075;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999299:4,4:4-4,4-4:14,4,0,0:4,14:NULL:90.4591:366.612,131.36:0.0,0.0:0.0,0.00034447,0.999659	0/0:27:0.999997:4,4:4-4,4-4:18,6,0,3:4,18:3,3:146.303:326.675,113.385:0.0,0.0:0.0,1.10421e-05,0.999993
+chr1	9726319	.	GAAAGAAAGAAA	.	.	.	END=9726330;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999389:3,3:3-3,3-3:14,15,0,0:3,14:NULL:187.761:366.612,131.36:0.0,0.0:0.0,0.000348747,0.999652	0/0:31:0.999991:3,3:3-3,3-3:18,11,0,2:3,18:2,2:185.272:326.675,113.385:0.0,0.0:0.0,1.32864e-05,0.999987
+chr1	9726354	.	TATTTATTTATT	.	.	.	END=9726365;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999407:3,3:3-3,3-3:14,13,0,0:3,14:NULL:170.997:366.612,131.36:0.0,0.0:8.671e-42,0.000330732,0.999673	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:204.567:326.675,113.385:0.0,0.0:0.0,1.8859e-06,1.0
+chr1	9727029	.	AAAACAAAACAAAACAAAAC	AAAAC	.	.	END=9727048;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.147142:1,1:1-3,1-3:0,29,0,0:NULL:NULL:260.807:366.612,131.36:0.611622,0.611622:0.774622,0.214201,0.0112283	0/0:45:1.0:4,4:4-4,4-4:23,17,0,5:4,23:2,1|3,4:276.386:326.675,113.385:0.0,0.0:0.0,2.68601e-07,1.0
+chr1	9728119	.	TTGTTGTTGTTG	.	.	.	END=9728130;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999633:4,4:4-4,4-4:15,17,0,0:4,15:NULL:213.604:366.612,131.36:0.0,0.0:0.0,0.000271032,0.999729	0/0:23:0.999951:4,4:4-4,4-4:18,5,0,0:4,18:NULL:116.76:326.675,113.385:0.0,0.0:0.0,3.20147e-05,0.999971
+chr1	9728313	.	ATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9728330;RU=at;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.821532:25,25:25-25,25-25:6,8,0,0:25,6:NULL:104.497:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:19:0.673641:9,9:9-10,9-10:5,13,0,0:9,5:NULL:142.839:326.675,113.385:0.603392,0.603392:1.10353e-05,0.188155,0.8119
+chr1	9729577	.	TTGTTGTTGTTG	.	.	.	END=9729588;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:4,4:4-4,4-4:24,0,0,0:4,24:NULL:93.8005:366.612,131.36:0.0,0.0:0.0,3.61953e-07,1.0	0/0:46:1.0:4,4:4-4,4-4:28,15,0,3:4,28:3,3:269.199:326.675,113.385:0.0,0.0:0.0,1.38348e-08,1.0
+chr1	9729594	.	ATTTATTTATTTATTT	.	.	.	END=9729609;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:29,0,0,0:4,29:NULL:114.501:366.612,131.36:0.0,0.0:0.0,1.14181e-08,1.0	0/0:46:1.0:4,4:3-4,3-4:27,15,0,3:4,27:3,3:267.498:326.675,113.385:0.169767,0.169767:0.0,3.26584e-08,1.0
+chr1	9730050	.	TGTGTGTGTGTGTGTG	.	.	.	END=9730065;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:73:1.0:8,8:8-8,8-8:45,20,0,6:8,45:5,2|6,2|7,1|8,1:410.914:366.612,131.36:0.0,0.0:0.0,1.52131e-13,1.0	0/0:69:1.0:8,8:8-8,8-8:45,15,0,5:8,45:5,1|6,1|7,3:360.851:326.675,113.385:0.835916,0.835916:0.0,1.68201e-13,1.0
+chr1	9730553	.	AGGAGGAGGAGG	.	.	.	END=9730564;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999248:4,4:4-4,4-4:15,23,0,0:4,15:NULL:283.987:366.612,131.36:0.0,0.0:0.0,0.000659289,0.999346	0/0:38:1.0:4,4:4-4,4-4:20,18,0,0:4,20:NULL:241.989:326.675,113.385:0.0,0.0:0.0,9.69816e-06,0.999993
+chr1	9730578	.	GAGGGAGGGAGG	.	.	.	END=9730589;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:23,18,0,3:3,23:2,3:288.801:366.612,131.36:0.0,0.0:0.0,1.09775e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:240.53:326.675,113.385:0.0,0.0:0.0,1.10364e-07,1.0
+chr1	9731162	.	AAAATAAAATAAAAT	.	.	.	END=9731176;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:24,23,0,3:3,24:2,3:324.123:366.612,131.36:0.0,0.0:0.0,4.06907e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:205.696:326.675,113.385:0.0,0.0:0.0,1.97209e-08,1.0
+chr1	9732554	.	AATAATAATAAT	.	.	.	END=9732565;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999678:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.542:366.612,131.36:0.0,0.0:0.0,0.000186926,0.999818	0/0:36:1.0:4,4:4-4,4-4:24,10,0,2:4,24:3,2:202.029:326.675,113.385:0.0,0.0:0.0,2.81655e-07,1.0
+chr1	9733417	.	ACACACACACACACAC	.	.	.	END=9733432;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.994154:8,8:7-9,7-9:18,13,0,0:7,2|8,16:NULL:194.667:366.612,131.36:0.385503,0.385503:4.85808e-28,0.00585527,0.994159	0/0:39:1.0:8,8:8-8,8-8:19,13,0,6:8,19:4,1|5,2|7,3:237.836:326.675,113.385:0.0990099,0.0990099:2.27551e-36,5.86533e-06,0.999995
+chr1	9736402	.	GGGTGGGTGGGT	.	.	.	END=9736413;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999623:3,3:3-3,3-3:15,29,0,0:3,15:NULL:326.54:366.612,131.36:0.0,0.0:4.575e-42,0.000206288,0.999796	0/0:44:0.997205:3,3:3-3,3-3:13,31,0,0:3,13:NULL:332.866:326.675,113.385:0.0,0.0:1.49104e-35,0.00244273,0.997564
+chr1	9736710	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGT	.	.	END=9736727;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:1.0:7,7:7-7,7-7:33,27,0,2:7,31|8,2:5,1|6,1:407.127:366.612,131.36:0.0,0.0:1.0,1.6412e-09,0.0	0/0:61:1.0:9,9:9-9,9-9:36,17,0,8:8,2|9,32|10,2:5,6|6,1|9,1:382.691:326.675,113.385:0.0,0.0:0.0,1.24426e-07,1.0
+chr1	9740263	.	TTTGTTTGTTTGTTTG	.	.	.	END=9740278;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999301:4,4:4-4,4-4:13,18,0,3:4,13:3,3:232.383:366.612,131.36:0.0,0.0:1.078e-42,0.000389996,0.999613	0/0:41:1.0:4,4:4-4,4-4:27,10,0,4:4,27:3,4:231.344:326.675,113.385:0.0,0.0:0.0,2.00338e-08,1.0
+chr1	9740932	.	AATAAATAAATA	.	.	.	END=9740943;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.990468:3,3:1-3,1-3:10,11,0,0:3,10:NULL:135.689:366.612,131.36:0.998774,0.998774:3.04931e-29,0.00513869,0.994874	0/0:24:0.999148:3,3:3-3,3-3:13,9,0,2:3,13:2,2:143.419:326.675,113.385:0.0,0.0:8.42605e-38,0.000372926,0.999629
+chr1	9741427	.	ATATATATATATAT	.	.	.	END=9741440;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.834358:7,7:6-7,6-7:15,10,0,0:6,2|7,13:NULL:155.991:366.612,131.36:0.419363,0.419363:2.42473e-16,0.16554,0.83453	0/0:23:0.98283:7,7:6-7,6-7:9,11,0,2:7,9:6,2:152.903:326.675,113.385:0.40582,0.40582:9.70936e-14,0.00935361,0.990665
+chr1	9742971	.	ACACACACACACACACACACACACACAC	.	.	.	END=9742998;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.260718:14,14:14-18,14-18:3,2,0,0:14,3:NULL:31.2034:366.612,131.36:1.68637,1.68637:4.67353e-05,0.219261,0.780736	0/0:16:0.673437:14,14:6-14,6-14:10,0,0,5:13,3|14,7:6,1|8,1|11,1|12,1|14,1:88.1707:326.675,113.385:3.81398,3.81398:2.73843e-15,0.316227,0.683785
+chr1	9743019	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9743048;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:7:0.268864:19,19:19-20,19-20:2,1,0,4:19,2:13,1|14,1|17,1|18,1:50.6647:366.612,131.36:0.317759,0.317759:0.0,0.0,1.0	1/0:6:0.714264:14,15:14-15,14-15:4,0,0,2:14,2|15,2:5,1|11,1:35.4905:326.675,113.385:0.492866,0.323567:0.0133686,0.802258,0.184464
+chr1	9743703	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	END=9743732;RU=tcttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.98728:8,8:6-8,6-8:11,8,0,0:8,11:NULL:122.033:366.612,131.36:0.874432,0.874432:1.207e-42,0.00771628,0.992303	0/0:31:0.999756:6,6:6-6,6-6:15,12,0,4:6,15:3,1|4,1|5,2:199.947:326.675,113.385:0.0,0.0:0.0,0.00014613,0.999857
+chr1	9743909	.	AAAACAAAACAAAAC	.	.	.	END=9743923;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999971:3,3:3-3,3-3:18,20,0,0:3,18:NULL:255.789:366.612,131.36:0.0,0.0:0.0,4.0055e-05,0.999963	0/0:45:1.0:3,3:3-3,3-3:31,14,0,0:3,31:NULL:250.64:326.675,113.385:0.0,0.0:0.0,5.20746e-09,1.0
+chr1	9748068	.	GCCGCCGCCGCC	.	.	.	END=9748079;RU=gcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,17,0,0:4,26:NULL:257.092:366.612,131.36:0.0,0.0:0.0,1.47759e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:22,19,0,0:4,22:NULL:267.859:326.675,113.385:0.0,0.0:0.0,4.34809e-06,0.999995
+chr1	9748275	.	TCCTCCTCCTCC	.	.	.	END=9748286;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:27,18,0,0:4,27:NULL:270.516:366.612,131.36:0.0,0.0:0.0,8.17244e-08,1.0	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:288.438:326.675,113.385:0.0,0.0:0.0,4.31425e-09,1.0
+chr1	9748387	.	CACTCACTCACT	.	.	.	END=9748398;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999851:3,3:3-3,3-3:16,21,0,2:3,16:2,2:268.385:366.612,131.36:0.0,0.0:0.0,0.000101391,0.999902	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:197.561:326.675,113.385:0.0,0.0:0.0,7.43655e-08,1.0
+chr1	9749147	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=9749162;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.284783:4,5:4-4,4-8:15,6,0,2:4,15:2,1|5,1:139.489:366.612,131.36:0.0,0.954612:0.0,4.00039e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:21,11,0,0:4,21:NULL:188.623:326.675,113.385:0.0,0.0:0.0,4.79595e-06,0.999995
+chr1	9749755	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG	.	.	END=9749786;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.99473:11,11:11-11,11-11:12,8,0,0:11,12:NULL:125.418:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:26:0.507991:16,16:15-17,15-17:9,6,0,10:15,2|16,7:6,1|10,2|14,2|15,5:180.248:326.675,113.385:0.606956,0.606956:3.50875e-07,0.483237,0.516843
+chr1	9750225	.	AGTAGTAGTAGT	.	.	.	END=9750236;RU=agt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:21,24,0,0:4,21:NULL:298.024:366.612,131.36:0.0,0.0:0.0,5.6266e-06,0.999995	0/0:29:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:149.83:326.675,113.385:0.0,0.0:0.0,2.38812e-06,1.0
+chr1	9752253	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9752286;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.997256:17,17:17-17,17-17:17,17,0,16:16,2|17,15:5,1|6,1|7,1|9,1|10,1|12,2|13,2|14,1|15,3|16,3:365.646:366.612,131.36:0.139319,0.139319:8.89801e-17,0.00262498,0.997382	0/1:53:0.277617:17,28:17-17,17-29:20,13,0,20:16,2|17,15|18,3:4,1|5,1|6,4|9,1|10,3|11,3|12,1|16,2|17,1|22,1|25,1|27,1:398.995:326.675,113.385:0.0,3.61678:9.044e-42,3.50049e-19,1.0
+chr1	9754367	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9754416;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:57:0.990223:27,27:27-27,27-27:13,19,0,23:27,13:4,2|5,1|6,1|8,1|11,1|12,1|13,1|16,2|17,3|18,2|19,1|20,2|21,2|23,2|25,1:420.448:366.612,131.36:0.0,0.0:3.55007e-33,0.00110758,0.998898	0/0:44:0.998768:25,25:20-25,20-25:18,8,0,15:24,2|25,16:6,1|7,1|10,1|12,1|13,1|14,1|15,2|20,2|21,2|22,1|24,2:282.635:326.675,113.385:1.19347,1.19347:5.59785e-17,0.000549827,0.999453
+chr1	9755337	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9755366;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:25:0.0259109:21,38:18-38,18-40:0,11,0,14:NULL:5,1|8,1|9,1|10,1|11,1|13,1|14,1|15,2|18,3|20,1|38,1:208.402:366.612,131.36:6.23399,8.69789:0.0,0.00387329,0.996135	0/1:40:0.28343:15,18:15-15,14-21:15,14,0,10:14,3|15,12:7,2|8,2|11,1|13,1|14,2|15,1|18,1:292.839:326.675,113.385:0.0,2.01937:2.47547e-24,2.57404e-05,0.999978
+chr1	9755657	.	TTGTTTGTTTGT	.	.	.	END=9755668;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:186.489:366.612,131.36:0.0,0.0:0.0,3.11925e-07,1.0	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.226:326.675,113.385:0.0,0.0:0.0,1.51129e-08,1.0
+chr1	9756639	.	TACATACATACA	.	.	.	END=9756650;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.966555:3,3:3-3,3-3:8,6,0,0:3,8:NULL:87.5348:366.612,131.36:0.0,0.0:9.22639e-24,0.0144593,0.985571	0/0:25:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:130.067:326.675,113.385:0.0,0.0:0.0,1.92148e-05,0.99998
+chr1	9757162	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9757199;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.627552:20,20:20-20,20-20:4,16,0,13:20,4:7,1|10,1|11,3|12,2|14,1|16,1|17,2|18,1|20,1:268.773:366.612,131.36:0.0,0.0:1.04652e-15,0.0540829,0.946001	0/0:39:0.810248:19,19:17-19,17-19:18,9,0,10:17,2|18,4|19,12:6,1|8,1|10,2|11,1|12,1|15,1|16,3:255.456:326.675,113.385:0.725682,0.725682:5.86452e-12,0.18951,0.81055
+chr1	9758381	.	GAGGGAGGGAGG	.	.	.	END=9758392;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999043:3,3:3-3,3-3:13,17,0,3:3,13:2,3:233.894:366.612,131.36:0.0,0.0:9.2e-44,0.000391643,0.999613	0/0:20:0.999413:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.155:326.675,113.385:0.0,0.0:0.0,0.000297211,0.999705
+chr1	9760350	.	TCTGTCTGTCTG	.	.	.	END=9760361;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999711:3,3:3-3,3-3:15,11,0,0:3,15:NULL:162.063:366.612,131.36:0.0,0.0:0.0,0.000177622,0.999826	0/0:21:0.992456:3,3:3-3,3-3:10,11,0,0:3,10:NULL:145.772:326.675,113.385:0.0,0.0:8.02761e-33,0.00492337,0.995091
+chr1	9762148	.	GCTTGCTTGCTTGCTT	.	.	.	END=9762163;RU=gctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997277:4,4:3-4,3-4:13,11,0,0:4,13:NULL:157.657:366.612,131.36:0.484441,0.484441:7.004e-42,0.00191796,0.998087	0/0:15:0.997053:4,4:4-4,4-4:12,3,0,0:4,12:NULL:72.1752:326.675,113.385:0.0,0.0:3.34431e-39,0.0016027,0.998405
+chr1	9762349	.	ATTTATTTATTT	ATTT	.	.	END=9762360;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:23:0.444967:1,3:1-4,3-4:2,20,0,0:3,2:NULL:212.951:366.612,131.36:1.24587,0.479355:2.66417e-05,0.665763,0.334226	0/0:14:0.86346:3,3:3-3,3-3:6,8,0,0:3,6:NULL:97.6072:326.675,113.385:0.0,0.0:2.96324e-15,0.0753266,0.92477
+chr1	9763714	.	AATAAATAAATAAATA	.	.	.	END=9763729;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999239:4,4:4-4,4-4:14,20,0,2:4,14:3,2:252.735:366.612,131.36:0.0,0.0:1.4954e-40,0.000504567,0.999499	0/0:29:0.999768:4,4:4-4,4-4:16,13,0,0:4,16:NULL:181.07:326.675,113.385:0.0,0.0:0.0,0.000168551,0.999834
+chr1	9763878	.	AAAAACAAAAACAAAAAC	.	.	.	END=9763895;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.964413:3,3:3-3,3-3:8,15,0,2:3,8:2,2:184.52:366.612,131.36:0.0,0.0:7.99829e-27,0.0215309,0.978512	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.123:326.675,113.385:0.0,0.0:0.0,7.80059e-06,0.999994
+chr1	9765363	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9765406;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:22:0.999992:22,26:22-22,22-26:13,7,0,2:22,8|26,5:7,1|18,1:148.74:366.612,131.36:0.0,0.780108:8.05933e-23,2.55888e-10,1.0	1/0:27:0.72604:21,22:21-22,22-22:7,9,0,11:21,2|22,5:6,1|9,1|10,1|11,2|12,2|13,1|17,1|18,1|20,1:202.097:326.675,113.385:0.499387,0.0990099:2.71366e-05,0.744188,0.255792
+chr1	9765415	.	GCGCGCGCGCGCGC	.	.	.	END=9765428;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999862:7,7:6-7,6-7:17,8,0,0:7,17:NULL:142.377:366.612,131.36:0.169767,0.169767:8.93e-43,8.60959e-05,0.999917	0/0:23:0.997911:7,7:7-7,7-7:13,10,0,0:7,13:NULL:140.463:326.675,113.385:0.0,0.0:7.27135e-33,0.000986207,0.99902
+chr1	9770170	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9770189;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999402:10,10:10-11,10-11:14,16,0,5:10,14:6,1|7,1|8,2|9,1:246.55:366.612,131.36:0.322657,0.322657:7.76315e-25,0.000246239,0.999757	0/1:32:0.291365:10,14:10-10,10-14:16,13,0,2:10,16:7,1|13,1:216.461:326.675,113.385:0.0,1.55007:3.90969e-31,1.72145e-07,1.0
+chr1	9770190	.	GCGCGCGCGCGCGCGCGCGC	.	.	.	END=9770209;RU=gc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997553:10,10:10-10,10-10:12,13,0,0:10,12:NULL:169.02:366.612,131.36:0.0,0.0:3.79124e-31,0.00132692,0.998678	0/0:26:0.997978:10,10:10-10,10-10:13,13,0,0:10,13:NULL:176.391:326.675,113.385:0.0,0.0:1.62128e-33,0.00144893,0.998557
+chr1	9770676	.	GCCCAGCCCAGCCCA	.	.	.	END=9770690;RU=gccca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999697:3,3:3-3,3-3:15,18,0,0:3,15:NULL:217.894:366.612,131.36:0.0,0.0:0.0,0.000236184,0.999766	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:174.723:326.675,113.385:0.0,0.0:0.0,2.41586e-07,1.0
+chr1	9771804	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9771841;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:60:0.999998:13,13:13-13,13-13:29,19,0,10:12,3|13,26:5,2|6,2|7,2|8,1|12,3:381.097:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:58:0.979498:19,19:18-19,18-19:24,18,0,16:17,2|18,4|19,18:5,1|6,4|9,1|10,1|11,1|12,2|13,2|16,1|17,2|18,1:414.085:326.675,113.385:0.253975,0.253975:4.98745e-19,0.0205358,0.979505
+chr1	9771917	.	CCACCACCACCACCACCACCA	.	.	.	END=9771937;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:7,7:7-7,7-7:26,15,0,3:7,26:5,2|6,1:261.157:366.612,131.36:0.0,0.0:0.0,7.95077e-08,1.0	0/0:45:1.0:7,7:7-7,7-7:24,16,0,5:7,24:3,1|5,1|6,3:286.844:326.675,113.385:0.0,0.0:0.0,2.22096e-07,1.0
+chr1	9772803	.	TATTTATTTATT	.	.	.	END=9772814;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.9895:3,3:3-3,3-3:10,10,0,0:3,10:NULL:126.035:366.612,131.36:0.0,0.0:6.07052e-30,0.00541532,0.994596	0/0:20:0.999978:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.7298:326.675,113.385:0.0,0.0:0.0,1.57048e-05,0.999986
+chr1	9773234	.	CACTCACTCACTCACTCACTCACT	.	.	.	END=9773257;RU=cact;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:6,6:6-6,6-6:21,14,0,3:6,21:2,1|3,2:237.891:366.612,131.36:0.0,0.0:0.0,7.5556e-06,0.999994	0/0:38:0.999985:6,6:6-6,6-6:18,14,0,6:6,18:3,3|4,3:238.929:326.675,113.385:0.0,0.0:0.0,2.30818e-05,0.999979
+chr1	9773465	.	AGGGAGGGAGGG	.	.	.	END=9773476;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.990242:3,3:3-3,3-3:10,20,0,2:3,10:2,2:240.93:366.612,131.36:0.0,0.0:1.05612e-25,0.00535308,0.994662	0/0:27:0.995156:3,3:3-3,3-3:11,16,0,0:3,11:NULL:188.95:326.675,113.385:0.0,0.0:5.69066e-29,0.00309688,0.996912
+chr1	9775295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9775348;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:50:0.359204:16,31:16-16,16-32:14,18,0,17:16,14:6,2|8,2|9,2|10,2|12,1|13,3|14,3|16,1|31,1:378.404:366.612,131.36:0.0,7.41562:0.000827229,0.999174,0.0	0/2:63:0.420572:27,29:26-27,25-29:10,19,0,32:26,2|27,8:5,2|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,3|16,1|18,1|19,3|21,1|23,1|24,1|26,3|27,1|28,1|29,1:481.528:326.675,113.385:0.363786,0.950392:1.92112e-27,2.60118e-07,1.0
+chr1	9776621	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9776664;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.728612:19,20:18-20,19-20:7,14,0,11:19,3|20,4:6,1|11,1|13,3|15,2|16,1|18,1|19,2:245.307:366.612,131.36:0.482006,0.258566:0.987298,0.0127278,6.95088e-09	3/0:35:0.690203:21,22:21-22,22-22:8,11,0,16:21,4|22,4:6,2|7,1|8,2|11,1|12,2|17,1|18,2|19,1|20,1|21,2|22,1:266.453:326.675,113.385:0.499779,0.0990099:6.32586e-11,0.695356,0.304656
+chr1	9778986	.	GTTTTGTTTTGTTTTGTTTT	GTTTT	.	.	END=9779005;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:28:0.989419:4,4:4-4,4-4:9,15,0,4:4,9:3,4:197.918:326.675,113.385:0.0,0.0:1.9785e-29,0.00514016,0.994873
+chr1	9781279	.	ACACACACACAC	ACACACAC	.	.	END=9781290;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:1.0:4,6:4-4,6-6:23,9,0,2:4,18|6,5:5,2:205.748:366.612,131.36:0.0,0.220506:8.01649e-15,1.0,3.01e-43	0/0:36:1.0:6,6:4-6,4-6:25,8,0,2:6,25:5,2:188.694:326.675,113.385:0.472766,0.472766:0.0,1.46617e-07,1.0
+chr1	9781294	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9781321;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:1.00001:6,6:6-6,6-6:21,10,0,3:6,21:3,1|5,2:198.83:366.612,131.36:0.0,0.0:1.0,3.46571e-06,1.64653e-38	0/0:37:1.0:7,7:7-7,7-7:24,8,0,4:7,24:3,2|6,2:202.003:326.675,113.385:0.0990099,0.0990099:0.0,3.46566e-07,1.0
+chr1	9782765	.	ACACACACACAC	.	.	.	END=9782776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:6,6:6-6,6-6:25,14,0,2:6,25:5,2:240.552:366.612,131.36:0.0,0.0:0.0,1.41851e-07,1.0	0/0:31:0.999979:6,6:6-6,6-6:18,11,0,2:6,18:4,1|5,1:185.59:326.675,113.385:0.0,0.0:5.9746e-41,1.31117e-05,0.999987
+chr1	9783489	.	TTAATTAATTAA	.	.	.	END=9783500;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.931726:3,3:3-3,3-3:7,12,0,0:3,7:NULL:143.564:366.612,131.36:0.0,0.0:1.00431e-22,0.0421595,0.957909	0/0:20:0.977339:3,3:3-3,3-3:9,11,0,0:3,9:NULL:133.384:326.675,113.385:0.0,0.0:7.88699e-29,0.0123908,0.987638
+chr1	9783579	.	TTTTTCTTTTTCTTTTTC	.	.	.	END=9783596;RU=tttttc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:191.105:366.612,131.36:0.0,0.0:0.0,3.26877e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:24,7,0,2:3,24:2,2:172.379:326.675,113.385:0.0,0.0:0.0,2.68502e-07,1.0
+chr1	9784280	.	CACACACACACA	.	.	.	END=9784291;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:6,6:6-6,6-6:48,3,0,10:6,48:5,10:295.928:366.612,131.36:0.0,0.0:0.0,1.23147e-14,1.0	0/0:62:1.0:6,6:6-6,6-6:37,17,0,8:6,37:4,1|5,7:375.86:326.675,113.385:0.0,0.0:0.0,2.25615e-11,1.0
+chr1	9784615	.	GAGGCAGAGGCAGAGGCA	GAGGCAGAGGCA	.	.	END=9784632;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.248705:2,2:2-4,2-4:2,0,0,0:2,2:NULL:7.85465:366.612,131.36:0.930482,0.930482:0.373682,0.62612,0.000254202	0/0:61:0.621118:3,3:2-6,2-6:24,34,0,2:2,3|3,21:2,1|5,1:451.761:326.675,113.385:1.18638,1.18638:0.0,0.0207558,0.979286
+chr1	9784654	.	AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	AGAGGCAGAGAGGCAGAGAGGCAG,AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	.	.	END=9784685;RU=agaggcag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.985133:3,5:3-7,4-7:8,0,0,0:3,3|4,2|5,3:NULL:45.1349:366.612,131.36:1.04922,0.802164:4.22929e-07,0.992433,0.00758428	0/0:52:0.999119:4,4:4-7,4-7:27,21,0,2:4,24|5,3:3,2:334.649:326.675,113.385:0.839777,0.839777:2.4e-44,9.83233e-08,1.0
+chr1	9784706	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=9784741;RU=agaggc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.0278135:1,1:3-3,3-3:0,0,0,0:NULL:NULL:-25.0:366.612,131.36:0.0,0.0:0.694258,0.277978,0.0277995	0/2:40:0.395279:6,8:6-6,6-9:21,13,0,6:6,21:3,2|4,3|8,1:264.25:326.675,113.385:0.0,1.03293:0.0,1.19432e-07,1.0
+chr1	9786376	.	GTTTGGTTTGGTTTG	.	.	.	END=9786390;RU=gtttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999852:3,3:3-3,3-3:16,8,0,0:3,16:NULL:133.565:366.612,131.36:0.0,0.0:0.0,8.14397e-05,0.999919	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:189.598:326.675,113.385:0.0,0.0:0.0,5.16134e-06,0.999995
+chr1	9788816	.	AACAACAACAAC	AACAACAACAACAAC	.	.	END=9788827;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.938741:5,5:5-5,5-5:8,9,0,0:5,8:NULL:109.917:366.612,131.36:0.0,0.0:4.20051e-38,0.0268514,0.973202	0/0:21:0.99973:4,4:4-4,4-4:15,4,0,2:4,15:3,2:112.361:326.675,113.385:0.0,0.0:0.0,0.000101813,0.999902
+chr1	9789386	.	ATTTTATTTTATTTT	.	.	.	END=9789400;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,11,0,2:3,22:2,2:208.141:366.612,131.36:0.0,0.0:0.0,8.52529e-07,1.0	0/0:26:0.999417:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.853:326.675,113.385:0.0,0.0:0.0,0.000427715,0.999575
+chr1	9796569	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=9796608;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.955718:13,13:12-14,12-14:12,19,0,4:12,2|13,10:5,1|7,1|9,1|12,1:263.311:366.612,131.36:0.397522,0.397522:1.0,0.0,0.0	0/0:39:0.851358:20,20:19-20,19-20:17,12,0,9:19,5|20,12:8,3|10,1|12,1|14,1|16,1|17,2:268.039:326.675,113.385:0.478127,0.478127:1.68661e-13,0.148339,0.85174
+chr1	9798093	.	CCGCCCGCCCGCCCGCCCGC	.	.	.	END=9798112;RU=ccgc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999086:5,5:5-5,5-5:13,17,0,5:5,13:2,1|3,1|4,3:247.0:366.612,131.36:0.0,0.0:3.414e-42,0.000565405,0.999438	0/0:44:1.0:5,5:5-5,5-5:23,17,0,4:5,23:3,1|4,3:281.783:326.675,113.385:0.0,0.0:0.0,3.9344e-07,1.0
+chr1	9800381	.	TTTTATTTTATTTTA	.	.	.	END=9800395;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.988017:3,3:3-3,3-3:10,8,0,0:3,10:NULL:117.52:366.612,131.36:0.0,0.0:6.69032e-33,0.00776259,0.992257	0/0:28:0.999938:3,3:3-3,3-3:17,8,0,3:3,17:2,3:164.191:326.675,113.385:0.0,0.0:0.0,2.82943e-05,0.999972
+chr1	9801889	.	TTCTTTCTTTCT	.	.	.	END=9801900;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999516:3,3:3-3,3-3:15,11,0,0:3,15:NULL:163.087:366.612,131.36:0.0,0.0:6.9e-44,0.000268222,0.999735	0/0:10:0.964687:3,3:3-3,3-3:8,2,0,0:3,8:NULL:48.5915:326.675,113.385:0.0,0.0:5.61729e-24,0.0150769,0.984957
+chr1	9803579	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=9803606;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.88391:15,15:15-16,15-16:6,18,0,7:15,6:6,1|7,1|8,1|11,1|13,2|14,1:243.146:366.612,131.36:0.398507,0.398507:1.37015e-19,0.0164038,0.98363	0/1:27:0.815792:14,15:14-14,14-15:17,6,0,4:14,13|15,4:8,2|10,1|12,1:173.844:326.675,113.385:0.0,0.498798:1.52138e-19,2.32917e-05,0.999979
+chr1	9804974	.	TTGTTTGTTTGTTTGT	.	.	.	END=9804989;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999777:4,4:4-4,4-4:16,6,0,0:4,16:NULL:118.431:366.612,131.36:0.0,0.0:0.0,0.000128633,0.999872	0/0:17:0.998613:4,4:4-4,4-4:13,4,0,0:4,13:NULL:89.6982:326.675,113.385:0.0,0.0:3.39e-43,0.000790602,0.999211
+chr1	9806598	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=9806615;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.853582:6,6:6-6,6-6:6,6,0,0:6,6:NULL:77.6782:366.612,131.36:0.0,0.0:4.9514e-15,0.0782325,0.921864	0/0:17:0.994489:6,6:6-6,6-6:11,6,0,0:6,11:NULL:99.6822:326.675,113.385:0.0,0.0:1.39924e-26,0.00350447,0.996504
+chr1	9806750	.	TTGTTGTTGTTG	.	.	.	END=9806761;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999921:4,4:4-4,4-4:17,11,0,0:4,17:NULL:161.608:366.612,131.36:0.0,0.0:0.0,4.79419e-05,0.999955	0/0:24:0.996284:4,4:4-4,4-4:12,12,0,0:4,12:NULL:157.937:326.675,113.385:0.0,0.0:4.87992e-40,0.00240843,0.997601
+chr1	9806981	.	CGGGCGGGCGGGCGGG	.	.	.	END=9806996;RU=cggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.989594:4,4:3-4,3-4:10,29,0,0:4,10:NULL:297.311:366.612,131.36:0.489073,0.489073:1.19331e-31,0.00907198,0.990948	0/0:22:0.986559:4,4:4-4,4-4:10,12,0,0:4,10:NULL:147.084:326.675,113.385:0.0,0.0:1.26129e-31,0.00847134,0.991547
+chr1	9807678	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9807697;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999646:4,4:4-4,4-4:14,14,0,3:4,14:2,1|3,2:201.224:366.612,131.36:0.0,0.0:0.0,0.000195752,0.999805	0/0:27:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:132.185:326.675,113.385:0.0,0.0:0.0,2.19567e-06,1.0
+chr1	9808179	.	TGTGTGTGTGTGTGTG	.	.	.	END=9808194;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999386:8,8:8-8,8-8:16,14,0,0:8,16:NULL:200.534:366.612,131.36:0.0,0.0:1.96352e-29,0.000336866,0.999666	0/0:32:0.999918:8,8:8-8,8-8:18,9,0,4:8,18:4,1|5,2|6,1:188.85:326.675,113.385:0.0990099,0.0990099:6.67356e-33,3.72853e-05,0.999964
+chr1	9808200	.	GAGAGAGAGAGA	.	.	.	END=9808211;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999693:6,6:6-6,6-6:16,18,0,0:6,16:NULL:230.695:366.612,131.36:0.0,0.0:1.655e-42,0.00018272,0.999819	0/0:34:1.0:6,6:6-6,6-6:24,10,0,0:6,24:NULL:186.575:326.675,113.385:0.0,0.0:0.0,6.11492e-07,1.0
+chr1	9808370	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	END=9808417;RU=tcca;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998063:10,10:10-10,10-10:12,13,0,11:10,12:4,2|6,4|7,2|8,1|9,2:253.601:366.612,131.36:0.0,0.0:0.999514,0.000488608,2.76787e-32	0/0:29:0.999744:12,12:7-12,7-12:16,6,0,5:12,16:2,1|6,1|8,1|9,1|11,1:163.278:326.675,113.385:2.13292,2.13292:2.5e-44,0.000172019,0.999828
+chr1	9808990	.	GTTGGTTGGTTG	.	.	.	END=9809001;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999405:3,3:3-3,3-3:14,13,0,0:3,14:NULL:177.168:366.612,131.36:0.0,0.0:0.0,0.000397118,0.999606	0/0:33:0.999972:3,3:3-3,3-3:17,12,0,4:3,17:2,4:202.829:326.675,113.385:0.0,0.0:0.0,1.99062e-05,0.99998
+chr1	9812671	.	ATTATATTATATTATATTATATTATATTATATTATATTAT	ATTATATTATATTATATTATATTATATTATATTATATTATATTATATTAT	.	.	END=9812710;RU=attat;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.929431:10,10:10-10,10-10:7,7,0,10:10,7:2,1|3,3|5,1|6,1|8,1|9,3:170.782:366.612,131.36:0.0,0.0:0.0,0.00194016,0.998064	0/0:16:0.97688:8,8:8-10,8-10:9,3,0,3:8,9:4,1|6,1|8,1:89.9138:326.675,113.385:0.985733,0.985733:7.60617e-29,0.00642369,0.993594
+chr1	9818042	.	CTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT	.	.	END=9818065;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.998255:8,8:8-8,8-8:13,12,0,4:8,13:4,1|5,1|7,2:196.425:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/0:39:0.994984:12,12:11-12,11-12:18,14,0,6:11,2|12,16:5,2|6,1|7,1|8,1|11,1:258.777:326.675,113.385:0.19802,0.19802:1.30381e-19,0.0050082,0.995003
+chr1	9818295	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9818334;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.48605:22,22:20-23,20-23:7,18,0,10:21,2|22,5:9,1|13,1|15,1|16,1|18,1|19,3|20,2:275.557:366.612,131.36:0.839893,0.839893:1.30512e-28,0.0037958,0.996216	0/0:36:0.966917:20,20:19-20,19-20:15,8,0,12:19,3|20,12:5,3|6,1|8,2|9,2|14,3|15,1:238.437:326.675,113.385:0.311527,0.311527:1.02404e-11,0.0317838,0.968277
+chr1	9820226	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9820273;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.694588:23,23:22-23,22-23:11,19,0,13:22,4|23,7:5,1|7,1|10,1|13,4|16,1|17,1|19,2|22,2:332.197:366.612,131.36:0.398507,0.398507:0.986097,0.01393,2.23481e-06	0/0:36:0.993385:24,24:21-25,21-25:15,10,0,9:24,15:5,1|7,1|8,1|10,1|11,2|13,1|16,1|20,1:235.877:326.675,113.385:0.561483,0.561483:3.0861e-17,0.000580728,0.999423
+chr1	9821837	.	ATTTATTTATTT	.	.	.	END=9821848;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.998511:3,3:3-3,3-3:13,7,0,0:3,13:NULL:117.565:366.612,131.36:0.0,0.0:5.13e-38,0.000747728,0.999256	0/0:30:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:156.203:326.675,113.385:0.0,0.0:0.0,4.60405e-07,1.0
+chr1	9821849	.	TATGTATGTATG	.	.	.	END=9821860;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.994045:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.202:366.612,131.36:0.0,0.0:4.28964e-32,0.00311552,0.996891	0/0:30:1.0:3,3:3-3,3-3:19,8,0,3:3,19:2,3:172.917:326.675,113.385:0.0,0.0:0.0,6.31206e-06,0.999994
+chr1	9823285	.	TTCTTTCTTTCT	.	.	.	END=9823296;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.990103:3,3:3-3,3-3:10,15,0,0:3,10:NULL:173.987:366.612,131.36:0.0,0.0:4.47423e-25,0.0067479,0.99327	0/0:32:1.00001:3,3:3-3,3-3:23,6,0,3:3,23:2,3:167.214:326.675,113.385:0.0,0.0:0.0,4.1974e-07,1.0
+chr1	9824948	.	TGTCTGTCTGTC	.	.	.	END=9824959;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:0.993508:3,3:3-6,3-6:40,25,0,2:3,34|5,2|6,4:2,2:434.181:366.612,131.36:1.34522,1.34522:0.0,8.55004e-11,1.0	0/0:41:1.00001:3,3:3-3,3-3:22,16,0,3:3,22:2,3:254.318:326.675,113.385:0.0,0.0:9.1404e-41,1.24183e-06,1.0
+chr1	9824960	.	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	.	.	END=9825019;RU=tcct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:75:0.894101:18,18:17-18,17-18:6,36,0,32:18,6:3,1|4,2|5,2|6,4|7,3|8,4|9,4|10,1|11,3|12,2|13,2|14,1|15,1|16,2:590.562:366.612,131.36:0.601439,0.601439:5.7e-44,0.0205646,0.979476	0/0:50:0.886348:15,15:15-15,15-15:6,21,0,23:15,6:3,1|4,2|5,1|6,3|7,2|8,5|10,1|11,1|12,2|13,4|15,1:385.936:326.675,113.385:0.19802,0.19802:2.6076e-24,0.0454539,0.95462
+chr1	9825656	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=9825687;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.836127:18,19:18-18,18-19:16,16,0,7:17,2|18,14:5,1|6,1|10,1|12,1|16,1|17,1|19,1:286.494:366.612,131.36:0.0,0.552507:0.0,4.13143e-09,1.0	0/0:43:0.929022:16,16:14-16,14-16:14,15,0,13:15,3|16,11:6,2|7,1|8,1|9,5|12,2|13,1|14,1:311.934:326.675,113.385:0.467134,0.467134:2.76491e-11,0.0697273,0.930367
+chr1	9827879	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	END=9827922;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.997821:12,12:12-14,12-14:13,9,0,6:12,13:2,1|3,1|4,1|5,1|6,1|11,1:185.044:366.612,131.36:0.938037,0.938037:1e-45,0.000621068,0.999384	0/0:34:0.990326:11,11:10-11,10-11:10,10,0,13:11,10:3,1|4,1|5,2|6,3|7,1|8,1|9,3|10,1:226.932:326.675,113.385:0.486863,0.486863:3.51965e-21,0.00474081,0.995273
+chr1	9829194	.	CAAACAAACAAA	.	.	.	END=9829205;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.931957:3,3:3-3,3-3:8,20,0,0:3,8:NULL:215.818:366.612,131.36:0.19802,0.19802:2.28635e-26,0.0536245,0.946459	0/0:23:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:110.934:326.675,113.385:0.0,0.0:0.0,7.53979e-06,0.999994
+chr1	9830384	.	TGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGTTGT	.	.	END=9830407;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.00001:7,7:7-7,7-7:20,5,0,6:7,20:4,2|5,2|6,2:170.636:366.612,131.36:0.0,0.0:0.999994,7.56169e-06,1.09839e-35	0/0:42:1.00001:8,8:8-9,8-9:21,13,0,7:8,21:4,1|5,2|6,1|7,3:258.526:326.675,113.385:0.236383,0.236383:0.0,2.35716e-06,1.0
+chr1	9830483	.	ATTTATTTATTTATTT	.	.	.	END=9830498;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999662:4,4:4-4,4-4:15,8,0,0:4,15:NULL:129.304:366.612,131.36:0.0,0.0:0.0,0.000198231,0.999804	0/0:40:1.0:4,4:4-4,4-4:25,9,0,6:4,25:2,2|3,4:227.354:326.675,113.385:0.0,0.0:0.0,9.26518e-08,1.0
+chr1	9831159	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA	.	.	END=9831204;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.875261:18,18:17-18,17-18:10,7,0,5:17,2|18,8:5,1|7,1|8,1|11,2:153.974:366.612,131.36:0.298675,0.298675:1.0,0.0,0.0	0/0:41:0.979102:23,23:21-23,21-23:10,12,0,17:23,10:5,3|8,1|9,1|11,2|14,2|15,2|16,1|18,1|20,2|21,1|22,1:293.713:326.675,113.385:0.374933,0.374933:2.1171e-11,0.00763937,0.992378
+chr1	9837956	.	AGAAAAGAAAAGAAA	AGAAA	.	.	END=9837970;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0297231:1,1:1-2,1-2:0,8,0,0:NULL:NULL:71.9503:366.612,131.36:0.390807,0.390807:0.0782578,0.444725,0.477189	0/0:30:1.00001:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.123:326.675,113.385:0.0,0.0:0.0,3.63503e-06,1.0
+chr1	9838257	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9838310;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:3:0.0468556:33,35:33-36,33-36:0,2,0,0:NULL:NULL:19.3453:366.612,131.36:0.950392,0.950392:0.0,0.0,1.0	0/3:39:0.304945:27,50:27-28,27-50:7,15,0,16:26,2|27,5:7,2|9,1|10,1|13,1|14,1|15,1|16,1|17,1|22,3|25,1|26,1|27,1|48,1:307.266:326.675,113.385:0.242928,10.4355:5.27967e-17,3.53169e-05,0.999964
+chr1	9839831	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9839872;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:15:0.141619:27,27:23-27,23-27:2,7,0,5:27,2:5,2|7,1|8,1|21,1:113.089:366.612,131.36:0.778346,0.778346:0.0,0.0,1.0	1/0:36:0.679783:20,21:17-21,21-22:14,9,0,9:20,6|21,8:5,1|9,1|10,1|13,2|15,2|16,1|20,1:225.393:326.675,113.385:1.12139,0.433614:2.84722e-07,0.680048,0.319968
+chr1	9840939	.	GGCAGGCAGGCA	GGCAGGCAGGCAGGCAGGCAGGCA	.	.	END=9840950;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.00129243:6,6:2-26,2-26:0,5,0,0:NULL:NULL:47.1789:366.612,131.36:9.54068,9.54068:0.00160588,0.112949,0.885551	0/0:43:1.0:3,3:3-3,3-3:26,14,0,3:3,26:2,3:250.977:326.675,113.385:0.0,0.0:0.0,5.21674e-08,1.0
+chr1	9841455	.	ATTTATTTATTT	.	.	.	END=9841466;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.745145:3,3:3-3,3-3:5,9,0,0:3,5:NULL:102.013:366.612,131.36:0.19802,0.19802:3.2461e-17,0.128006,0.872092	0/0:34:1.0:3,3:3-3,3-3:18,13,0,3:3,18:2,3:211.788:326.675,113.385:0.0,0.0:0.0,7.91138e-06,0.999994
+chr1	9844142	.	TTTGTTTTGTTTTGT	.	.	.	END=9844156;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:214.616:366.612,131.36:0.0,0.0:0.0,3.18974e-06,1.0	0/0:31:0.999995:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.375:326.675,113.385:0.0,0.0:0.0,1.24004e-05,0.999987
+chr1	9845384	.	TTTGTTTGTTTGTTTG	.	.	.	END=9845399;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.998791:4,4:4-4,4-4:13,17,0,4:4,13:2,1|3,3:239.939:366.612,131.36:0.0,0.0:1.195e-42,0.000582992,0.999422	0/0:39:1.00001:4,4:4-4,4-4:22,13,0,4:4,22:3,4:234.074:326.675,113.385:0.0,0.0:0.0,8.18899e-07,1.0
+chr1	9849556	.	ATAAATAAATAA	.	.	.	END=9849567;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999492:3,3:3-3,3-3:14,6,0,3:3,14:2,3:130.899:366.612,131.36:0.0,0.0:0.0,0.000200496,0.999803	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.533:326.675,113.385:0.0,0.0:0.0,2.51299e-06,1.0
+chr1	9852948	.	GTGTGTGTGTGT	.	.	.	END=9852959;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:6,6:6-6,6-6:25,20,0,4:6,25:4,1|5,3:310.852:366.612,131.36:0.139319,0.139319:0.0,1.32196e-07,1.0	0/0:80:1.0:6,6:6-6,6-6:52,20,0,7:6,52:4,1|5,5|6,1:443.199:326.675,113.385:0.0,0.0:0.0,6.31683e-16,1.0
+chr1	9853686	.	TGGGGGTGGGGGTGGGGG	.	.	.	END=9853703;RU=tggggg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.997794:3,3:3-3,3-3:12,4,0,0:3,12:NULL:85.2044:366.612,131.36:0.0,0.0:3.32937e-37,0.0011244,0.998877	0/0:24:0.999793:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.883:326.675,113.385:0.0,0.0:0.0,0.000124373,0.999879
+chr1	9854454	.	GGTGTGGGTGTGGGTGTG	.	.	.	END=9854471;RU=ggtgtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999504:3,3:3-3,3-3:15,24,0,0:3,15:NULL:283.829:366.612,131.36:0.0,0.0:0.0,0.000434667,0.999568	0/0:46:1.0:3,3:3-3,3-3:28,16,0,2:3,28:2,2:277.364:326.675,113.385:0.0,0.0:0.0,2.70576e-08,1.0
+chr1	9855719	.	AAAACAAAACAAAAC	.	.	.	END=9855733;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:20,24,0,3:3,20:2,3:313.064:366.612,131.36:0.0,0.0:0.0,9.3561e-06,0.999993	0/0:42:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:254.18:326.675,113.385:0.0,0.0:0.0,3.36552e-07,1.0
+chr1	9856153	.	TCTCTGTCTCTGTCTCTGTCTCTG	.	.	.	END=9856176;RU=tctctg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999708:4,4:4-4,4-4:15,16,0,2:4,15:3,2:226.754:366.612,131.36:0.0,0.0:0.0,0.000228585,0.999773	0/0:35:1.00001:4,4:4-4,4-4:22,11,0,2:4,22:2,1|3,1:200.712:326.675,113.385:0.0,0.0:0.0,1.50182e-06,1.0
+chr1	9856692	.	TTGGTTGGTTGG	.	.	.	END=9856703;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.147:366.612,131.36:0.0,0.0:0.0,6.00121e-06,0.999995	0/0:38:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:242.701:326.675,113.385:0.0,0.0:0.0,3.8504e-06,1.0
+chr1	9861552	.	CACACACACACA	.	.	.	END=9861563;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996689:6,6:6-6,6-6:12,17,0,0:6,12:NULL:199.806:366.612,131.36:0.0,0.0:1.73761e-30,0.00195815,0.998049	0/0:28:0.999915:6,6:6-6,6-6:17,11,0,0:6,17:NULL:168.335:326.675,113.385:0.0,0.0:5.68e-43,5.40906e-05,0.999948
+chr1	9862138	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9862197;RU=tc;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.283346:28,34:28-34,28-35:2,12,0,6:28,2:11,1|20,1|27,2|32,2:173.596:366.612,131.36:1.98781,2.06212:1.3212e-14,0.996905,0.00310473	0/3:23:0.243131:30,37:30-37,30-39:2,8,0,12:30,2:5,2|8,2|15,1|21,1|23,1|24,1|26,1|27,1|31,1|36,1:182.082:326.675,113.385:1.48138,3.03113:6.09945e-17,0.00714323,0.992873
+chr1	9863057	.	GTTGTTGTTGTT	.	.	.	END=9863068;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:222.293:366.612,131.36:0.0,0.0:0.0,3.25984e-07,1.0	0/0:44:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:248.583:326.675,113.385:0.0,0.0:0.0,1.11874e-08,1.0
+chr1	9864594	.	CACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACA	.	.	END=9864631;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.999921:14,14:14-14,14-14:22,14,0,9:13,2|14,20:6,2|9,2|11,2|12,1|13,2:289.763:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:37:0.675596:19,19:18-19,18-19:14,11,0,12:18,4|19,10:7,3|8,1|11,1|12,2|13,1|15,1|18,2|19,1:265.578:326.675,113.385:0.484441,0.484441:1.43435e-18,0.32366,0.676349
+chr1	9867773	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9867818;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.611123:24,25:23-24,23-25:9,6,0,0:23,3|24,4|25,2:NULL:108.064:366.612,131.36:0.509492,0.987918:2.54692e-12,0.0019901,0.998018	0/3:58:0.323888:23,30:22-23,22-31:17,13,0,26:22,7|23,10:5,1|7,3|9,2|10,1|11,1|12,1|13,1|15,1|17,4|18,3|19,1|20,1|21,4|26,1|30,1:432.974:326.675,113.385:0.236383,3.65447:3.68409e-18,4.2178e-08,1.0
+chr1	9869113	.	AAACAAACAAAC	.	.	.	END=9869124;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:190.381:366.612,131.36:0.0,0.0:0.0,4.82552e-06,0.999995	0/0:48:1.0:3,3:3-3,3-3:29,16,0,3:3,29:2,3:287.382:326.675,113.385:0.0,0.0:0.0,5.28486e-09,1.0
+chr1	9869920	.	TTATTTATTTAT	TTATTTAT	.	.	END=9869931;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:1.0:2,2:2-2,2-2:19,19,0,0:2,19:NULL:248.076:366.612,131.36:0.0,0.0:0.999994,7.2952e-06,0.0	0/0:48:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:295.033:326.675,113.385:0.0,0.0:0.0,3.15431e-08,1.0
+chr1	9870260	.	AAAACAAAACAAAAC	.	.	.	END=9870274;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999959:3,3:3-3,3-3:17,10,0,2:3,17:2,2:178.341:366.612,131.36:0.0,0.0:0.0,2.2708e-05,0.999979	0/0:47:1.0:3,3:3-3,3-3:26,19,0,2:3,26:2,2:291.141:326.675,113.385:0.0,0.0:0.0,3.40741e-08,1.0
+chr1	9871386	.	AAACAAACAAAC	.	.	.	END=9871397;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999952:3,3:3-3,3-3:17,5,0,2:3,17:2,2:125.436:366.612,131.36:0.0,0.0:0.0,1.64594e-05,0.999986	0/0:31:0.999928:3,3:3-3,3-3:17,14,0,0:3,17:NULL:191.988:326.675,113.385:0.0,0.0:0.0,5.03227e-05,0.999949
+chr1	9879082	.	TTAATTAATTAATTAA	.	.	.	END=9879097;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:20,9,0,0:4,20:NULL:159.068:366.612,131.36:0.0,0.0:0.0,6.97538e-06,0.999994	0/0:28:0.999416:4,4:2-4,2-4:14,11,0,2:4,14:2,2:168.38:326.675,113.385:0.838725,0.838725:0.0,0.000365613,0.999636
+chr1	9879249	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9879284;RU=ct;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.992848:15,15:14-16,14-16:16,17,0,8:14,2|15,14:5,1|9,1|10,2|13,1|14,3:289.126:366.612,131.36:0.243733,0.243733:0.99997,3.39202e-05,1.05713e-27	2/0:18:0.767584:17,18:16-18,16-18:5,8,0,4:17,2|18,3:5,1|12,1|13,1|18,1:129.478:326.675,113.385:0.680364,0.40047:3.97845e-11,0.813711,0.186351
+chr1	9879878	.	AAATAAATAAAT	.	.	.	END=9879889;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999975:3,3:3-3,3-3:18,23,0,0:3,18:NULL:275.822:366.612,131.36:0.0,0.0:0.0,2.97102e-05,0.999971	0/0:18:0.999676:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.7982:326.675,113.385:0.0,0.0:0.0,0.000170969,0.999833
+chr1	9881346	.	AAACAAACAAAC	.	.	.	END=9881357;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99988:3,3:3-3,3-3:16,13,0,2:3,16:2,2:195.991:366.612,131.36:0.0,0.0:0.0,7.08186e-05,0.999933	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:169.089:326.675,113.385:0.0,0.0:0.0,5.3849e-06,0.999995
+chr1	9882998	.	AGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAG	.	.	END=9883013;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.899765:11,11:10-11,10-11:20,15,0,0:10,4|11,16:NULL:232.783:366.612,131.36:0.496236,0.496236:0.0,5.84748e-06,0.999995	0/0:46:0.999933:8,8:7-8,7-8:27,19,0,0:7,3|8,24:NULL:287.503:326.675,113.385:0.195027,0.195027:1.96e-43,6.88518e-05,0.999933
+chr1	9885007	.	AAATAAATAAAT	.	.	.	END=9885018;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999448:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.404:366.612,131.36:0.0,0.0:0.0,0.000289629,0.999712	0/0:43:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:265.343:326.675,113.385:0.0,0.0:0.0,6.64981e-07,1.0
+chr1	9885057	.	AAGCAAGCAAGCAAGC	.	.	.	END=9885072;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999615:4,4:4-4,4-4:14,13,0,2:4,14:3,2:183.777:366.612,131.36:0.0,0.0:0.0,0.000180652,0.99982	0/0:49:1.0:4,4:4-4,4-4:22,22,0,5:4,22:2,1|3,4:322.98:326.675,113.385:0.0,0.0:0.0,9.46111e-07,1.0
+chr1	9885469	.	AAACAAACAAACAAACAAAC	.	.	.	END=9885488;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999674:5,5:5-5,5-5:15,23,0,2:5,15:3,1|4,1:286.081:366.612,131.36:0.0,0.0:0.0,0.000260613,0.999742	0/0:32:0.999898:5,5:5-5,5-5:16,12,0,4:5,16:2,1|4,3:208.683:326.675,113.385:0.0,0.0:0.0,5.205e-05,0.999949
+chr1	9887284	.	GTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9887299;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:0.209314:14,14:8-14,8-14:2,44,0,4:14,2:4,1|7,1|12,2:449.64:366.612,131.36:1.88218,1.88218:0.0,0.0,1.0	0/0:48:1.00001:8,8:8-8,8-8:22,23,0,2:8,22:6,2:333.026:326.675,113.385:0.0,0.0:2.00117e-39,1.37359e-06,1.0
+chr1	9887485	.	AACAACAACAAC	AAC,AACAACAAC	.	.	END=9887496;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:12:0.0586291:1,3:3-6,3-6:0,10,0,0:NULL:NULL:97.0339:366.612,131.36:1.11394,1.06646:0.245824,0.507488,0.246708	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:224.506:326.675,113.385:0.0,0.0:0.0,2.42337e-07,1.0
+chr1	9890042	.	TTACTTACTTAC	.	.	.	END=9890053;RU=ttac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:29,22,0,0:3,29:NULL:313.361:366.612,131.36:0.0,0.0:0.0,3.53268e-08,1.0	0/0:45:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:258.912:326.675,113.385:0.0,0.0:0.0,1.2277e-08,1.0
+chr1	9892145	.	TGCTTGCTTGCT	.	.	.	END=9892156;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999911:3,3:3-3,3-3:17,6,0,0:3,17:NULL:119.963:366.612,131.36:0.0,0.0:0.0,5.25139e-05,0.999948	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:222.228:326.675,113.385:0.0,0.0:0.0,1.95093e-08,1.0
+chr1	9893504	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9893541;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0238588:1,1:1-7,1-7:0,28,0,0:NULL:NULL:259.638:366.612,131.36:1.75429,1.75429:0.97156,0.0284034,8.91644e-05	0/2:52:0.297224:19,24:19-19,19-25:17,15,0,18:18,2|19,15:5,1|6,1|7,3|8,2|9,1|10,1|12,1|13,3|15,1|16,2|18,1|24,1:372.061:326.675,113.385:0.0,2.45313:2.49488e-16,1.29365e-05,0.999987
+chr1	9893935	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC,TCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9893984;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:8:0.00457127:1,2:1-7,1-7:0,8,0,0:NULL:NULL:67.714:366.612,131.36:2.33974,2.32123:0.544137,0.406993,0.0490268	0/3:38:0.376588:25,27:22-25,22-28:4,22,0,12:25,4:11,2|12,1|14,2|15,1|17,2|18,1|21,1|22,1|27,1:312.196:326.675,113.385:0.5093,1.40594:2.97015e-12,0.000131841,0.999872
+chr1	9898438	.	GTATGTATGTAT	.	.	.	END=9898449;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.978492:3,3:3-3,3-3:9,14,0,0:3,9:NULL:166.738:366.612,131.36:0.0,0.0:1.9341e-33,0.0150783,0.984951	0/0:42:1.0:3,3:3-3,3-3:25,15,0,2:3,25:2,2:259.815:326.675,113.385:0.0,0.0:0.0,1.99488e-07,1.0
+chr1	9901685	.	TTTGTTTGTTTG	.	.	.	END=9901696;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.956383:3,3:3-3,3-3:8,19,0,0:3,8:NULL:204.764:366.612,131.36:0.0,0.0:4.14176e-25,0.0298128,0.970245	0/0:37:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:227.902:326.675,113.385:0.0,0.0:0.0,1.54881e-06,1.0
+chr1	9902992	.	CAGCCAGCCAGC	.	.	.	END=9903003;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.493114:3,3:1-3,1-3:4,13,0,0:3,4:NULL:138.826:366.612,131.36:0.464609,0.464609:6.93932e-13,0.263274,0.736731	0/0:18:0.891041:3,3:3-3,3-3:7,11,0,0:3,7:NULL:128.4:326.675,113.385:0.0,0.0:4.43637e-22,0.0645661,0.935524
+chr1	9903318	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9903365;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.411727:25,28:25-25,25-28:7,24,0,13:25,7:7,1|8,1|10,1|11,2|14,1|15,1|19,1|21,1|22,1|24,1|25,1|28,1:363.359:366.612,131.36:0.0,1.47853:1.40748e-31,1.59087e-07,1.0	0/1:50:0.996071:24,25:24-25,24-25:16,16,0,18:23,2|24,9|25,5:5,2|6,1|7,1|8,1|9,4|11,1|13,1|14,2|16,1|19,1|20,1|21,1|22,1:377.873:326.675,113.385:0.195027,0.345543:1.73537e-16,5.01236e-05,0.999949
+chr1	9905688	.	TAAATAAATAAA	.	.	.	END=9905699;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:245.165:366.612,131.36:0.0,0.0:0.0,6.23891e-06,0.999995	0/0:26:0.999304:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.728:326.675,113.385:0.0,0.0:0.0,0.000467848,0.999537
+chr1	9908942	.	CTGTCTGTCTGT	.	.	.	END=9908953;RU=ctgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999835:3,3:3-3,3-3:16,19,0,0:3,16:NULL:238.973:366.612,131.36:0.0,0.0:0.0,9.62251e-05,0.999904	0/0:38:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:254.86:326.675,113.385:0.0,0.0:0.0,9.79986e-06,0.999993
+chr1	9909330	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=9909349;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999896:4,4:4-4,4-4:17,21,0,0:4,17:NULL:262.052:366.612,131.36:0.0,0.0:0.0,9.88637e-05,0.999903	0/0:23:0.999776:4,4:4-4,4-4:15,4,0,4:4,15:2,2|3,2:126.019:326.675,113.385:0.0,0.0:2e-44,8.28355e-05,0.999918
+chr1	9909905	.	TGGTGGTGGTGGTGG	.	.	.	END=9909919;RU=tgg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999914:5,5:5-5,5-5:16,15,0,2:5,16:4,2:213.466:366.612,131.36:0.0,0.0:0.0,4.13652e-05,0.999962	0/0:37:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:4,2:225.98:326.675,113.385:0.0,0.0:0.0,1.89249e-06,1.0
+chr1	9910263	.	ATGTATGTATGTATGTATGTATGTATGTATGT	ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT,ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	END=9910294;RU=atgt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:1.0:11,12:11-11,12-12:13,18,0,5:11,7|12,6:4,1|9,1|10,1|11,2:268.62:366.612,131.36:0.0990099,0.0:0.0,0.0,1.0	0/0:57:1.0:8,8:8-9,8-9:22,22,0,11:8,22:2,1|3,1|4,4|5,1|7,4:372.409:326.675,113.385:0.169767,0.169767:0.0,1.6759e-06,1.0
+chr1	9911074	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9911103;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.940177:21,21:20-21,20-21:11,12,0,16:20,2|21,9:5,1|7,2|11,1|12,1|13,2|14,3|15,1|18,1|19,1|20,3:293.216:366.612,131.36:0.422623,0.422623:0.0,0.0,1.0	0/0:50:0.995963:15,15:14-16,14-16:23,16,0,9:13,2|14,3|15,18:6,1|9,2|11,2|12,1|13,1|14,2:331.675:326.675,113.385:0.430892,0.430892:3.29582e-21,0.00404109,0.995968
+chr1	9911501	.	TTGTTGTTGTTG	TTG	.	.	END=9911512;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.0667818:1,1:1-3,1-3:0,17,0,0:NULL:NULL:153.882:366.612,131.36:0.461008,0.461008:0.326566,0.517452,0.156012	0/0:25:0.999989:4,4:4-4,4-4:18,5,0,2:4,18:3,2:133.462:326.675,113.385:0.0,0.0:0.0,1.61308e-05,0.999986
+chr1	9913930	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=9913979;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.600148:19,19:18-19,18-19:5,14,0,6:19,5:6,1|8,1|11,1|12,1|13,2:197.352:366.612,131.36:0.352842,0.352842:1.0,0.0,0.0	0/0:39:0.284415:25,25:12-25,12-25:6,20,0,11:24,2|25,4:5,1|9,2|11,3|12,1|13,1|16,2|21,1:300.186:326.675,113.385:5.37526,5.37526:0.00137437,0.683164,0.31548
+chr1	9914697	.	TTATTTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTATTTATTTATTTAT	.	.	END=9914724;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.936097:9,9:9-9,9-9:7,13,0,3:9,7:4,1|7,1|8,1:170.463:366.612,131.36:0.0,0.0:1.69215e-38,0.00880929,0.99121	0/0:20:0.999825:7,7:7-7,7-7:16,4,0,0:7,16:NULL:106.409:326.675,113.385:0.0,0.0:1.23276e-40,0.000110242,0.999894
+chr1	9914909	.	TATTTATTTATT	.	.	.	END=9914920;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999952:3,3:3-3,3-3:17,9,0,0:3,17:NULL:149.228:366.612,131.36:0.0,0.0:0.0,3.09509e-05,0.999971	0/0:38:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:237.639:326.675,113.385:0.0,0.0:0.0,2.51367e-06,1.0
+chr1	9916204	.	ACAAACAAACAAACAAACAAACAA	.	.	.	END=9916227;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999805:6,6:6-6,6-6:15,17,0,5:6,15:3,1|4,1|5,3:258.758:366.612,131.36:0.0,0.0:1.112e-41,0.000114363,0.999887	0/0:42:1.0:6,6:6-6,6-6:22,14,0,6:6,22:3,1|4,1|5,4:270.528:326.675,113.385:0.0,0.0:0.0,5.54593e-07,1.0
+chr1	9916809	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9916844;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:43:0.354926:21,22:21-23,22-23:8,24,0,11:21,3|22,3|23,2:5,2|9,3|11,1|12,1|14,1|15,1|16,1|21,1:359.386:366.612,131.36:0.969893,0.494455:0.0,0.0,1.0	0/0:27:0.987027:18,18:17-19,17-19:14,9,0,3:17,2|18,12:7,1|9,1|15,1:173.626:326.675,113.385:0.329868,0.329868:9.77748e-14,0.0120442,0.987981
+chr1	9918705	.	ATTTATTTATTT	.	.	.	END=9918716;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999363:3,3:3-3,3-3:14,20,0,2:3,14:2,2:254.897:366.612,131.36:0.0,0.0:0.0,0.00037565,0.999628	0/0:39:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:223.823:326.675,113.385:0.0,0.0:0.0,2.44769e-07,1.0
+chr1	9920939	.	CACCACCACCAC	.	.	.	END=9920950;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997915:4,4:4-4,4-4:12,13,0,3:4,12:3,3:186.52:366.612,131.36:0.0,0.0:9.20825e-40,0.000727877,0.999278	0/0:25:0.999758:4,4:4-4,4-4:15,8,0,2:4,15:3,2:148.712:326.675,113.385:0.0,0.0:0.0,0.000113113,0.999888
+chr1	9922186	.	GTTTGTTTGTTTGTTT	.	.	.	END=9922201;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:4,4:4-4,4-4:23,14,0,4:4,23:2,3|3,1:250.895:366.612,131.36:0.0,0.0:0.0,6.67579e-07,1.0	0/0:42:1.00001:4,4:4-4,4-4:22,15,0,5:4,22:2,2|3,3:261.244:326.675,113.385:0.0,0.0:0.0,9.56311e-07,1.0
+chr1	9923740	.	AAACAAACAAAC	.	.	.	END=9923751;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:221.137:366.612,131.36:0.0,0.0:0.0,7.15839e-08,1.0	0/0:32:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:173.336:326.675,113.385:0.0,0.0:0.0,9.15984e-07,1.0
+chr1	9926111	.	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC	.	.	.	END=9926146;RU=tgcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:9,9:9-9,9-9:26,27,0,3:9,26:5,1|6,2:385.972:366.612,131.36:0.0,0.0:0.0,3.23186e-07,1.0	0/0:60:1.0:9,9:9-9,9-9:30,16,0,14:9,30:2,1|3,4|4,2|5,2|6,2|7,1|8,2:372.654:326.675,113.385:0.0,0.0:0.0,2.1782e-09,1.0
+chr1	9927265	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACAC,ACACACACACACACACACACACACACACACAC	.	.	END=9927298;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.999983:8,8:8-8,8-8:20,23,0,3:8,20:5,2|7,1:316.603:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/0:46:0.938:16,17:16-18,17-17:23,16,0,6:16,7|17,14|18,2:6,1|10,1|11,1|14,2|15,1:321.003:326.675,113.385:0.589421,0.0:5.79561e-16,0.937993,0.0620969
+chr1	9928606	.	CAAACAAACAAACAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAA,CAAACAAACAAACAAACAAACAAACAAA	.	.	END=9928637;RU=caaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.999999:6,7:6-6,6-7:27,8,0,2:6,20|7,7:5,1|6,1:217.641:366.612,131.36:0.0,0.298675:1.0,1.35717e-12,0.0	0/0:47:1.0:8,8:8-8,8-8:19,16,0,12:8,19:2,1|3,2|5,4|6,1|7,4:310.491:326.675,113.385:0.0,0.0:7.54194e-38,6.13532e-06,0.999994
+chr1	9929327	.	ATTTATTTATTT	.	.	.	END=9929338;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999178:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.782:366.612,131.36:0.0,0.0:5.32e-43,0.000467032,0.999537	0/0:37:1.0:3,3:3-3,3-3:19,16,0,2:3,19:2,2:226.484:326.675,113.385:0.0,0.0:0.0,6.84549e-06,0.999994
+chr1	9931528	.	GTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9931551;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.300779:25,27:24-25,24-27:3,10,0,14:25,3:6,1|7,1|8,2|11,1|12,2|14,2|22,2|23,1|24,1|27,1:213.196:366.612,131.36:0.414188,1.25785:0.0,0.0,1.0	0/0:54:0.999892:12,12:12-12,12-12:25,20,0,8:11,3|12,22:6,3|8,2|9,1|10,2:355.594:326.675,113.385:0.0990099,0.0990099:4.0669e-29,0.000110906,0.999889
+chr1	9932293	.	CATGCATGCATG	.	.	.	END=9932304;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999915:3,3:3-3,3-3:17,10,0,0:3,17:NULL:159.901:366.612,131.36:0.0,0.0:0.0,4.9656e-05,0.999949	0/0:27:1.0:3,3:3-3,3-3:24,3,0,0:3,24:NULL:123.691:326.675,113.385:0.0,0.0:0.0,3.65319e-07,1.0
+chr1	9932642	.	TTGTTGTTGTTG	.	.	.	END=9932653;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998884:4,4:4-4,4-4:14,26,0,0:4,14:NULL:306.3:366.612,131.36:0.0,0.0:0.0,0.000958701,0.999044	0/0:51:1.0:4,4:4-4,4-4:36,13,0,2:4,36:3,2:276.95:326.675,113.385:0.0,0.0:0.0,6.98338e-11,1.0
+chr1	9932828	.	ATTTATTTATTT	.	.	.	END=9932839;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:22,32,0,0:3,22:NULL:379.475:366.612,131.36:0.0,0.0:0.0,1.63408e-06,1.0	0/0:57:1.0:3,3:3-3,3-3:30,23,0,4:3,30:2,4:361.396:326.675,113.385:0.0,0.0:0.0,6.78511e-09,1.0
+chr1	9934352	.	AATAAATAAATA	AATA	.	.	END=9934363;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.12816:1,1:1-2,1-2:0,18,0,0:NULL:NULL:181.554:366.612,131.36:0.48807,0.48807:0.324607,0.534066,0.141371	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:234.426:326.675,113.385:0.0,0.0:0.0,2.12861e-07,1.0
+chr1	9935825	.	AATAAATAAATA	.	.	.	END=9935836;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999946:3,3:3-3,3-3:17,9,0,3:3,17:2,3:174.81:366.612,131.36:0.0,0.0:0.0,2.60871e-05,0.999978	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:168.481:326.675,113.385:0.0,0.0:0.0,6.61641e-06,0.999994
+chr1	9936450	.	CACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9936469;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.754773:29,29:14-30,14-30:5,26,0,21:29,5:6,1|9,2|11,2|13,1|15,1|16,1|17,3|19,1|21,1|22,1|24,3|25,1|26,1|27,2:431.551:366.612,131.36:7.38805,7.38805:0.0,0.0,1.0	0/0:46:0.999835:10,10:10-10,10-10:25,10,0,10:9,2|10,23:5,1|7,3|8,1|9,5:282.769:326.675,113.385:0.0,0.0:2.73707e-27,0.000164869,0.999835
+chr1	9937602	.	AGACAGACAGAC	.	.	.	END=9937613;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:251.557:366.612,131.36:0.0,0.0:0.0,5.17987e-08,1.0	0/0:55:1.0:3,3:3-3,3-3:38,17,0,0:3,38:NULL:306.04:326.675,113.385:0.0,0.0:0.0,3.47401e-11,1.0
+chr1	9938474	.	ATTTATTTATTT	.	.	.	END=9938485;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.998051:3,3:3-3,3-3:12,20,0,0:3,12:NULL:227.664:366.612,131.36:0.0,0.0:2.00917e-35,0.00146511,0.998541	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:201.908:326.675,113.385:0.0,0.0:0.0,3.09853e-06,1.0
+chr1	9944919	.	AAAGAAAGAAAGAAAG	.	.	.	END=9944934;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.291195:4,4:1-4,1-4:4,21,0,0:4,4:NULL:210.783:366.612,131.36:1.42918,1.42918:4.83796e-12,0.605732,0.394331	0/0:22:0.998394:4,4:4-4,4-4:13,9,0,0:4,13:NULL:133.016:326.675,113.385:0.0,0.0:1.19106e-38,0.00113158,0.998875
+chr1	9945172	.	AAATAAATAAAT	AAATAAATAAATAAAT	.	.	END=9945183;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.94616:3,4:3-3,3-4:14,9,0,2:3,12|4,2:2,2:162.388:366.612,131.36:0.0,0.499779:4.32895e-35,1.41116e-05,0.999987	0/0:23:0.999466:3,3:3-3,3-3:14,9,0,0:3,14:NULL:135.122:326.675,113.385:0.0,0.0:1.65127e-37,0.000301198,0.999704
+chr1	9946807	.	ATTTATTTATTTATTT	.	.	.	END=9946822;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,18,0,0:4,23:NULL:256.771:366.612,131.36:0.0,0.0:0.0,1.9099e-06,1.0	0/0:24:0.997971:4,4:4-4,4-4:12,9,0,3:4,12:3,3:150.242:326.675,113.385:0.0,0.0:4.41124e-35,0.000867772,0.999135
+chr1	9947166	.	TCTCTCTCTCTC	.	.	.	END=9947177;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.996535:6,6:6-6,6-6:12,12,0,0:6,12:NULL:156.996:366.612,131.36:0.0,0.0:1.88734e-26,0.0018215,0.998185	0/0:24:0.999224:6,6:6-6,6-6:14,10,0,0:6,14:NULL:147.189:326.675,113.385:0.0,0.0:9.76726e-31,0.000426219,0.999576
+chr1	9948124	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9948161;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:67:0.9884:20,20:19-20,19-20:25,25,0,15:19,6|20,19:5,2|8,2|10,1|13,2|14,2|15,1|16,2|19,2|20,1:474.865:366.612,131.36:0.407748,0.407748:0.0,3.44628e-07,1.0	0/0:46:0.71969:19,19:14-21,14-21:22,12,0,10:17,2|18,5|19,15:4,1|6,4|9,1|10,1|13,1|18,2:308.056:326.675,113.385:1.22324,1.22324:1.63252e-15,0.280307,0.719693
+chr1	9948680	.	GCTAGCTAGCTA	.	.	.	END=9948691;RU=gcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:215.978:366.612,131.36:0.0,0.0:0.0,1.10919e-06,1.0	0/0:27:0.999737:3,3:3-3,3-3:15,10,0,2:3,15:2,2:164.22:326.675,113.385:0.0,0.0:0.0,0.000118598,0.999881
+chr1	9949344	.	GGAGGGAGGGAG	.	.	.	END=9949355;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:23,19,0,0:3,23:NULL:267.64:366.612,131.36:0.0,0.0:0.0,1.65122e-06,1.0	0/0:24:0.99956:3,3:3-3,3-3:14,10,0,0:3,14:NULL:148.374:326.675,113.385:0.0,0.0:0.0,0.000285647,0.999719
+chr1	9949792	.	CACACACACACA	CACACACACACACA	.	.	END=9949803;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.828594:7,7:6-8,6-8:7,22,0,0:7,7:NULL:230.641:366.612,131.36:0.806551,0.806551:3.48337e-18,0.105813,0.894289	0/0:32:0.75241:6,6:6-7,6-7:16,16,0,0:6,14|7,2:NULL:225.665:326.675,113.385:0.472558,0.472558:5.09718e-31,0.000158717,0.999842
+chr1	9952017	.	AATTAATTAATTAATT	.	.	.	END=9952032;RU=aatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999444:4,4:4-4,4-4:14,26,0,0:4,14:NULL:294.719:366.612,131.36:0.0,0.0:1.99e-43,0.000478412,0.999523	0/0:24:0.998082:4,4:4-4,4-4:13,11,0,0:4,13:NULL:147.239:326.675,113.385:0.0,0.0:8.69591e-40,0.00148927,0.998518
+chr1	9954129	.	AAATAAATAAATAAAT	.	.	.	END=9954144;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999395:4,4:4-4,4-4:14,19,0,0:4,14:NULL:228.251:366.612,131.36:0.0,0.0:0.0,0.000436763,0.999567	0/0:30:0.999958:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:176.546:326.675,113.385:0.0,0.0:0.0,2.22757e-05,0.999979
+chr1	9955647	.	AAAACAAAACAAAAC	.	.	.	END=9955661;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999977:3,3:3-3,3-3:18,20,0,0:3,18:NULL:256.039:366.612,131.36:0.0,0.0:0.0,3.37449e-05,0.99997	0/0:44:1.0:3,3:3-3,3-3:23,21,0,0:3,23:NULL:298.006:326.675,113.385:0.0,0.0:0.0,2.53549e-06,1.0
+chr1	9956363	.	TGTGTGTGTGTG	.	.	.	END=9956374;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:0.599682:6,6:6-10,6-10:27,17,0,3:6,27:5,2|7,1:299.204:366.612,131.36:1.03739,1.03739:0.0,1.96076e-08,1.0	0/0:35:1.0:6,6:5-6,5-6:24,8,0,2:6,24:5,2:186.469:326.675,113.385:0.169767,0.169767:0.0,2.89937e-07,1.0
+chr1	9956833	.	TTTCTTTCTTTC	.	.	.	END=9956844;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:2-3,2-3:22,17,0,0:3,22:NULL:240.663:366.612,131.36:0.270063,0.270063:0.0,1.76112e-06,1.0	0/0:34:1.00001:3,3:3-3,3-3:23,11,0,0:3,23:NULL:194.583:326.675,113.385:0.0,0.0:0.0,8.88355e-07,1.0
+chr1	9958725	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=9958749;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999999:5,5:5-5,5-5:18,16,0,7:5,18:2,1|3,1|4,5:263.611:366.612,131.36:0.0,0.0:0.0,1.04761e-05,0.999993	0/0:41:1.0:5,5:5-5,5-5:24,14,0,3:5,24:3,1|4,2:243.839:326.675,113.385:0.0,0.0:0.0,2.1328e-07,1.0
+chr1	9964154	.	CACACACACACA	CACACACACA	.	.	END=9964165;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:44:0.973327:5,6:5-6,6-6:23,16,0,4:5,4|6,19:4,1|5,3:292.296:366.612,131.36:0.498011,0.0:1.09539e-28,0.973325,0.0267257	0/0:40:1.0:6,6:6-6,6-6:23,17,0,0:6,23:NULL:241.746:326.675,113.385:0.0,0.0:1.526e-42,1.09676e-06,1.0
+chr1	9966035	.	TATTATTATTAT	.	.	.	END=9966046;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:20,17,0,0:4,20:NULL:235.128:366.612,131.36:0.0,0.0:0.0,1.06038e-05,0.999993	0/0:28:0.999974:4,4:4-4,4-4:18,10,0,0:4,18:NULL:156.766:326.675,113.385:0.0,0.0:0.0,3.35008e-05,0.99997
+chr1	9967640	.	CCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCG	CCCGCCCGCCCGCCCGCCCG	.	.	END=9967671;RU=cccg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999921:5,5:5-5,5-5:17,26,0,6:5,17:4,6:355.515:366.612,131.36:0.0,0.0:0.999993,9.34284e-06,0.0	0/0:69:1.0:8,8:8-8,8-8:27,33,0,9:8,27:4,2|5,4|6,1|7,2:505.436:326.675,113.385:0.0,0.0:0.0,1.28947e-07,1.0
+chr1	9969740	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=9969757;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.0:7,7:7-7,7-7:20,11,0,2:7,20:5,2:199.72:366.612,131.36:0.0,0.0:0.0,3.86837e-06,1.0	0/0:34:1.0:6,6:6-6,6-6:19,10,0,4:6,19:5,4:198.517:326.675,113.385:0.0990099,0.0990099:0.0,6.04175e-06,0.999994
+chr1	9970610	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9970627;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:32:0.279716:18,27:18-18,16-27:10,11,0,9:16,2|18,8:7,1|9,1|10,1|12,1|13,1|16,1|17,2|24,1:233.594:366.612,131.36:0.0,4.23348:0.0,0.0,1.0	0/1:30:0.362935:9,11:9-9,9-11:15,10,0,5:9,15:5,1|6,1|8,2|11,1:205.017:326.675,113.385:0.0,0.885129:1.01799e-27,4.71352e-08,1.0
+chr1	9971832	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=9971863;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.992697:6,6:6-6,6-6:10,15,0,2:6,10:4,1|5,1:203.936:366.612,131.36:0.0990099,0.0990099:0.998944,0.0010614,4.04235e-28	0/0:32:0.995512:8,8:8-8,8-8:11,11,0,10:8,11:3,1|4,3|5,1|6,3|7,2:221.554:326.675,113.385:0.0,0.0:1.77565e-31,0.00219471,0.997813
+chr1	9973536	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9973555;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:59:0.902665:12,12:8-22,8-22:27,26,0,4:11,6|12,21:6,1|7,2|19,1:424.73:366.612,131.36:4.08502,4.08502:0.0,1.04962e-07,1.0	0/0:53:0.999501:10,10:10-11,10-11:29,14,0,8:10,26|11,3:4,2|5,1|6,1|7,2|8,1|9,1:318.327:326.675,113.385:0.236383,0.236383:1.51294e-36,3.1442e-08,1.0
+chr1	9974995	.	CCTCCCTCCCTCCCTCCCTCCCTCCCTC	CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC,CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC	.	.	END=9975022;RU=cctc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.138925:9,12:9-12,9-12:0,18,0,5:NULL:5,2|6,1|7,1|11,1:203.91:366.612,131.36:1.41185,1.03975:0.0,0.0,1.0	0/0:43:0.946905:7,7:6-7,6-7:7,21,0,14:7,7:2,2|3,4|4,2|6,6:331.615:326.675,113.385:0.498798,0.498798:6.1531e-18,0.02783,0.972222
+chr1	9975875	.	AAACAAACAAAC	.	.	.	END=9975886;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999883:3,3:3-3,3-3:16,23,0,0:3,16:NULL:280.224:366.612,131.36:0.0,0.0:0.0,9.63939e-05,0.999903	0/0:38:1.0:3,3:3-3,3-3:24,11,0,3:3,24:2,3:215.89:326.675,113.385:0.0,0.0:0.0,1.27547e-07,1.0
+chr1	9977198	.	TTTGTTTGTTTG	.	.	.	END=9977209;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:350.953:366.612,131.36:0.0,0.0:0.0,1.5997e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:256.659:326.675,113.385:0.0,0.0:0.0,3.31841e-07,1.0
+chr1	9977219	.	TGTTTGTTTGTT	.	.	.	END=9977230;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:27,30,0,2:3,27:2,2:397.372:366.612,131.36:0.0,0.0:0.0,2.00918e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:257.592:326.675,113.385:0.0,0.0:0.0,8.22526e-08,1.0
+chr1	9978977	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9979014;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.896527:26,26:24-26,24-26:7,14,0,18:26,7:5,2|6,1|8,1|9,1|14,2|15,1|16,1|19,2|20,2|21,1|22,1|24,1|25,2:312.007:366.612,131.36:0.825531,0.825531:0.0,0.0,1.0	0/2:55:0.289981:19,29:19-19,19-32:16,16,0,21:19,16:5,4|7,2|8,2|9,1|10,1|11,3|12,1|13,1|14,1|15,1|17,2|20,1|29,1:399.795:326.675,113.385:0.0,4.91823:2.38919e-27,5.47478e-14,1.0
+chr1	9979016	.	AAAATAAAAATAAAAATA	.	.	.	END=9979033;RU=aaaata;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:22,17,0,0:3,22:NULL:246.388:366.612,131.36:0.0,0.0:0.0,2.00612e-06,1.0	0/0:48:1.0:3,3:3-3,3-3:31,15,0,2:3,31:2,2:269.157:326.675,113.385:0.0,0.0:0.0,1.91913e-09,1.0
+chr1	9980211	.	AAATAAATAAATAAAT	.	.	.	END=9980226;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999921:4,4:4-4,4-4:17,6,0,0:4,17:NULL:119.881:366.612,131.36:0.0,0.0:0.0,4.93888e-05,0.999955	0/0:31:1.00001:4,4:4-4,4-4:22,6,0,3:4,22:3,3:163.046:326.675,113.385:0.0,0.0:0.0,7.88772e-07,1.0
+chr1	9981579	.	AAATAAATAAAT	.	.	.	END=9981590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997694:3,3:3-3,3-3:12,13,0,0:3,12:NULL:166.886:366.612,131.36:0.0,0.0:4.75854e-37,0.00125553,0.998747	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:174.335:326.675,113.385:0.0,0.0:0.0,3.34348e-06,1.0
+chr1	9982246	.	ACACACACACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=9982265;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.972552:15,15:14-16,14-16:13,19,0,6:14,2|15,11:8,2|12,1|13,2|14,1:280.815:366.612,131.36:0.405095,0.405095:0.0,0.0,1.0	0/0:50:0.999953:10,10:9-10,9-10:33,12,0,5:9,5|10,26|11,2:5,1|7,2|8,1|9,1:306.31:326.675,113.385:0.242928,0.242928:7.60741e-36,3.70945e-05,0.999964
+chr1	9982521	.	TTGTTGTTGTTG	.	.	.	END=9982532;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:22,9,0,3:4,22:3,3:193.373:366.612,131.36:0.0,0.0:0.0,9.32828e-07,1.0	0/0:57:1.0:4,4:4-4,4-4:45,9,0,3:4,45:3,3:280.876:326.675,113.385:0.0,0.0:0.0,7.36941e-14,1.0
+chr1	9984525	.	GCAAGAGCAAGAGCAAGA	GCAAGA	.	.	END=9984542;RU=gcaaga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:1.00001:1,1:1-1,1-1:21,19,0,0:1,21:NULL:254.048:366.612,131.36:0.0,0.0:1.0,7.08224e-07,0.0	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:239.768:326.675,113.385:0.0,0.0:0.0,1.29823e-07,1.0
+chr1	9986540	.	TTGTTGTTGTTG	.	.	.	END=9986551;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.00001:4,4:4-4,4-4:23,27,0,3:4,23:3,3:365.923:366.612,131.36:0.0,0.0:0.0,6.35825e-07,1.0	0/0:42:1.0:4,4:4-4,4-4:26,16,0,0:4,26:NULL:243.992:326.675,113.385:0.0,0.0:0.0,1.1716e-07,1.0
+chr1	9987209	.	AATAAATAAATAAATAAATAAATA	.	.	.	END=9987232;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.981668:6,6:5-6,5-6:9,10,0,3:6,9:2,1|4,1|5,1:150.808:366.612,131.36:0.425627,0.425627:1.86629e-24,0.0108559,0.98917	0/0:29:0.99986:6,6:6-6,6-6:16,11,0,2:6,16:5,2:179.84:326.675,113.385:0.0,0.0:6.45e-43,7.34505e-05,0.999926
+chr1	9987535	.	CAAACAAACAAACAAA	.	.	.	END=9987550;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999932:4,4:4-4,4-4:17,11,0,2:4,17:3,2:181.058:366.612,131.36:0.0,0.0:0.0,3.59208e-05,0.999964	0/0:35:0.999911:4,4:4-4,4-4:16,14,0,5:4,16:3,5:226.155:326.675,113.385:0.0,0.0:0.0,4.04958e-05,0.999963
+chr1	9989590	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9989609;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999454:8,8:8-8,8-8:15,8,0,2:8,15:3,1|5,1:155.464:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:36:1.0:5,5:5-5,5-5:26,8,0,2:5,26:3,1|4,1:193.06:326.675,113.385:0.0,0.0:0.0,7.69892e-08,1.0
+chr1	9989921	.	TCATCATCATCA	.	.	.	END=9989932;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:220.703:366.612,131.36:0.0,0.0:0.0,3.39588e-07,1.0	0/0:62:1.0:4,4:4-4,4-4:43,17,0,2:4,43:3,2:346.1:326.675,113.385:0.0,0.0:0.0,4.68102e-13,1.0
+chr1	9990327	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9990360;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.790985:23,23:22-24,22-24:9,20,0,6:22,2|23,7:6,1|13,1|16,1|18,1|19,1|22,1:277.297:366.612,131.36:0.578848,0.578848:0.0,0.0,1.0	0/0:56:0.998586:17,17:16-17,16-17:19,17,0,17:16,3|17,16:4,1|7,1|8,4|9,1|10,4|12,1|13,2|14,1|16,1|17,1:373.085:326.675,113.385:0.21692,0.21692:6.86508e-27,0.0012838,0.998723
+chr1	9993008	.	AAATAAATAAAT	.	.	.	END=9993019;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999925:3,3:3-3,3-3:17,10,0,0:3,17:NULL:156.012:366.612,131.36:0.0,0.0:0.0,4.21511e-05,0.999957	0/0:21:0.999304:3,3:3-3,3-3:14,7,0,0:3,14:NULL:122.489:326.675,113.385:0.0,0.0:0.0,0.00039125,0.999613
+chr1	9996407	.	AATAAATAAATA	.	.	.	END=9996418;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.681:366.612,131.36:0.0,0.0:0.0,1.46403e-06,1.0	0/0:27:0.999931:3,3:3-3,3-3:17,10,0,0:3,17:NULL:153.515:326.675,113.385:0.0,0.0:0.0,4.14139e-05,0.999962
+chr1	9997562	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAACAAACAAA	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.931239:8,8:7-9,7-9:7,23,0,7:8,7:3,1|4,2|6,1|7,3:290.899:366.612,131.36:0.762826,0.762826:0.961227,0.0388423,1.67923e-15	.
+chr1	9997609	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.946889:8,8:6-8,6-8:8,20,0,0:8,8:NULL:217.425:366.612,131.36:0.996022,0.996022:5.08871e-18,0.0405452,0.959521	.
+chr2	2	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:37:0.99925:9,9:9-9,9-9:14,15,0,8:9,14:3,2|5,2|6,1|8,3:257.71:326.675,113.385:0.0,0.0:5.53904e-32,0.000440525,0.999561
+chr2	10	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:34:0.999453:8,8:7-9,7-9:15,15,0,2:8,15:4,1|7,1:216.15:326.675,113.385:0.370196,0.370196:1.5076e-32,0.000343545,0.999659
diff --git a/trtools/mergeSTR/tests/mydir/test_gangstr_outputcurrent b/trtools/mergeSTR/tests/mydir/test_gangstr_outputcurrent
new file mode 120000
index 00000000..21e4fbbe
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_gangstr_outputcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_gangstr_output0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0/test.vcf
new file mode 100644
index 00000000..99d731a1
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0/test.vcf
@@ -0,0 +1,126 @@
+##fileformat=VCFv4.1
+##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
+##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##contig=<ID=1,length=249250621>
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+##contig=<ID=NC_007605,length=171823>
+##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
+##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
+##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
+##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
+##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
+##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
+##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
+##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
+##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
+##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
+##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
+##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
+##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
+##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
+##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
+##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
+##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
+##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
+##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
+##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
+##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
+##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_hipstr1:GTEX-R55C-0003	test_file_hipstr2:GTEX-R55C-0004
+1	16717	STR_2	GGTGGTGGTGGGGGCGGTGGGGGTGGTG	GGTGGTGGTGGGGGCGGTGGTGGTGCTG	.	.	START=16717;END=16744;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|0:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
diff --git a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0/test.vcf
new file mode 100644
index 00000000..1f49f4b3
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0/test.vcf
@@ -0,0 +1,3435 @@
+##fileformat=VCFv4.1
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03710.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03763.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
+##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03710.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03763.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
+##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##source="beagle.22Jul22.46e.jar"
+##contig=<ID=chr1,length=248956422>
+##contig=<ID=chr2,length=242193529>
+##contig=<ID=chr3,length=198295559>
+##contig=<ID=chr4,length=190214555>
+##contig=<ID=chr5,length=181538259>
+##contig=<ID=chr6,length=170805979>
+##contig=<ID=chr7,length=159345973>
+##contig=<ID=chr8,length=145138636>
+##contig=<ID=chr9,length=138394717>
+##contig=<ID=chr10,length=133797422>
+##contig=<ID=chr11,length=135086622>
+##contig=<ID=chr12,length=133275309>
+##contig=<ID=chr13,length=114364328>
+##contig=<ID=chr14,length=107043718>
+##contig=<ID=chr15,length=101991189>
+##contig=<ID=chr16,length=90338345>
+##contig=<ID=chr17,length=83257441>
+##contig=<ID=chr18,length=80373285>
+##contig=<ID=chr19,length=58617616>
+##contig=<ID=chr20,length=64444167>
+##contig=<ID=chr21,length=46709983>
+##contig=<ID=chr22,length=50818468>
+##contig=<ID=chrX,length=156040895>
+##contig=<ID=chrY,length=57227415>
+##contig=<ID=chrM,length=16569>
+##contig=<ID=chr1_KI270706v1_random,length=175055>
+##contig=<ID=chr1_KI270707v1_random,length=32032>
+##contig=<ID=chr1_KI270708v1_random,length=127682>
+##contig=<ID=chr1_KI270709v1_random,length=66860>
+##contig=<ID=chr1_KI270710v1_random,length=40176>
+##contig=<ID=chr1_KI270711v1_random,length=42210>
+##contig=<ID=chr1_KI270712v1_random,length=176043>
+##contig=<ID=chr1_KI270713v1_random,length=40745>
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+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=AP1,Number=A,Type=Float,Description="estimated ALT dose on first haplotype">
+##FORMAT=<ID=AP2,Number=A,Type=Float,Description="estimated ALT dose on second haplotype">
+##FORMAT=<ID=DS,Number=A,Type=Float,Description="estimated ALT dose [P(RA) + 2*P(AA)]">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	hipstr_imputed_merge1:HG02256	hipstr_imputed_merge1:HG02257	hipstr_imputed_merge2:HG02258	hipstr_imputed_merge2:HG02280
+chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	.	START=1007589;END=1007618;PERIOD=6	GT:AP1:AP2:DS	0|0:0.0:0.0:0.0	0|0:0.0:1.0:0.0	0|0:0.0:0.5:0.0	0|0:0.0:0.25:0.0
+chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CGACAACAACAACAA,CAACAACAACAACAACAA	.	.	START=1111533;END=1111547;PERIOD=3	GT:AP1:AP2:DS	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.25:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.5:0.0,0.0,0.0,0.0
diff --git a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_APcurrent b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_APcurrent
new file mode 120000
index 00000000..65700fbf
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_APcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFilecurrent
new file mode 120000
index 00000000..5e255919
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFilecurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipstr_output0/test.vcf
new file mode 100644
index 00000000..e7228875
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipstr_output0/test.vcf
@@ -0,0 +1,126 @@
+##fileformat=VCFv4.1
+##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
+##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
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+##contig=<ID=GL000248.1,length=39786>
+##contig=<ID=GL000244.1,length=39929>
+##contig=<ID=GL000238.1,length=39939>
+##contig=<ID=GL000202.1,length=40103>
+##contig=<ID=GL000234.1,length=40531>
+##contig=<ID=GL000232.1,length=40652>
+##contig=<ID=GL000206.1,length=41001>
+##contig=<ID=GL000240.1,length=41933>
+##contig=<ID=GL000236.1,length=41934>
+##contig=<ID=GL000241.1,length=42152>
+##contig=<ID=GL000243.1,length=43341>
+##contig=<ID=GL000242.1,length=43523>
+##contig=<ID=GL000230.1,length=43691>
+##contig=<ID=GL000237.1,length=45867>
+##contig=<ID=GL000233.1,length=45941>
+##contig=<ID=GL000204.1,length=81310>
+##contig=<ID=GL000198.1,length=90085>
+##contig=<ID=GL000208.1,length=92689>
+##contig=<ID=GL000191.1,length=106433>
+##contig=<ID=GL000227.1,length=128374>
+##contig=<ID=GL000228.1,length=129120>
+##contig=<ID=GL000214.1,length=137718>
+##contig=<ID=GL000221.1,length=155397>
+##contig=<ID=GL000209.1,length=159169>
+##contig=<ID=GL000218.1,length=161147>
+##contig=<ID=GL000220.1,length=161802>
+##contig=<ID=GL000213.1,length=164239>
+##contig=<ID=GL000211.1,length=166566>
+##contig=<ID=GL000199.1,length=169874>
+##contig=<ID=GL000217.1,length=172149>
+##contig=<ID=GL000216.1,length=172294>
+##contig=<ID=GL000215.1,length=172545>
+##contig=<ID=GL000205.1,length=174588>
+##contig=<ID=GL000219.1,length=179198>
+##contig=<ID=GL000224.1,length=179693>
+##contig=<ID=GL000223.1,length=180455>
+##contig=<ID=GL000195.1,length=182896>
+##contig=<ID=GL000212.1,length=186858>
+##contig=<ID=GL000222.1,length=186861>
+##contig=<ID=GL000200.1,length=187035>
+##contig=<ID=GL000193.1,length=189789>
+##contig=<ID=GL000194.1,length=191469>
+##contig=<ID=GL000225.1,length=211173>
+##contig=<ID=GL000192.1,length=547496>
+##contig=<ID=NC_007605,length=171823>
+##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
+##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
+##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
+##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
+##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
+##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
+##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
+##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
+##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
+##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
+##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
+##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
+##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
+##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
+##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
+##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
+##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
+##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
+##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
+##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
+##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
+##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	GTEX-R55C-0003	GTEX-R55C-0004
+1	16717	STR_2	GGTGGTGGTGGGGGCGGTGGGGGTGGTG	GGTGGTGGTGGGGGCGGTGGTGGTGCTG	.	.	START=16717;END=16744;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|0:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0/test.vcf
new file mode 100644
index 00000000..f23c1632
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0/test.vcf
@@ -0,0 +1,3435 @@
+##fileformat=VCFv4.1
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_r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A12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03710.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03763.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
+##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03710.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03763.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
+##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
+##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##source="beagle.22Jul22.46e.jar"
+##contig=<ID=chr1,length=248956422>
+##contig=<ID=chr2,length=242193529>
+##contig=<ID=chr3,length=198295559>
+##contig=<ID=chr4,length=190214555>
+##contig=<ID=chr5,length=181538259>
+##contig=<ID=chr6,length=170805979>
+##contig=<ID=chr7,length=159345973>
+##contig=<ID=chr8,length=145138636>
+##contig=<ID=chr9,length=138394717>
+##contig=<ID=chr10,length=133797422>
+##contig=<ID=chr11,length=135086622>
+##contig=<ID=chr12,length=133275309>
+##contig=<ID=chr13,length=114364328>
+##contig=<ID=chr14,length=107043718>
+##contig=<ID=chr15,length=101991189>
+##contig=<ID=chr16,length=90338345>
+##contig=<ID=chr17,length=83257441>
+##contig=<ID=chr18,length=80373285>
+##contig=<ID=chr19,length=58617616>
+##contig=<ID=chr20,length=64444167>
+##contig=<ID=chr21,length=46709983>
+##contig=<ID=chr22,length=50818468>
+##contig=<ID=chrX,length=156040895>
+##contig=<ID=chrY,length=57227415>
+##contig=<ID=chrM,length=16569>
+##contig=<ID=chr1_KI270706v1_random,length=175055>
+##contig=<ID=chr1_KI270707v1_random,length=32032>
+##contig=<ID=chr1_KI270708v1_random,length=127682>
+##contig=<ID=chr1_KI270709v1_random,length=66860>
+##contig=<ID=chr1_KI270710v1_random,length=40176>
+##contig=<ID=chr1_KI270711v1_random,length=42210>
+##contig=<ID=chr1_KI270712v1_random,length=176043>
+##contig=<ID=chr1_KI270713v1_random,length=40745>
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+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Allele count in genotypes">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=AP1,Number=A,Type=Float,Description="estimated ALT dose on first haplotype">
+##FORMAT=<ID=AP2,Number=A,Type=Float,Description="estimated ALT dose on second haplotype">
+##FORMAT=<ID=DS,Number=A,Type=Float,Description="estimated ALT dose [P(RA) + 2*P(AA)]">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02256	HG02257	HG02258	HG02280
+chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	.	START=1007589;END=1007618;PERIOD=6	GT:AP1:AP2:DS	0|0:0.0:0.0:0.0	0|0:0.0:1.0:0.0	0|0:0.0:0.5:0.0	0|0:0.0:0.25:0.0
+chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CGACAACAACAACAA,CAACAACAACAACAACAA	.	.	START=1111533;END=1111547;PERIOD=3	GT:AP1:AP2:DS	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.25:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.5:0.0,0.0,0.0,0.0
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output_APcurrent b/trtools/mergeSTR/tests/mydir/test_hipstr_output_APcurrent
new file mode 120000
index 00000000..938a1821
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipstr_output_APcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0/test.vcf
new file mode 100644
index 00000000..36adfa23
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0/test.vcf
@@ -0,0 +1,128 @@
+##fileformat=VCFv4.1
+##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
+##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
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+##contig=<ID=GL000206.1,length=41001>
+##contig=<ID=GL000240.1,length=41933>
+##contig=<ID=GL000236.1,length=41934>
+##contig=<ID=GL000241.1,length=42152>
+##contig=<ID=GL000243.1,length=43341>
+##contig=<ID=GL000242.1,length=43523>
+##contig=<ID=GL000230.1,length=43691>
+##contig=<ID=GL000237.1,length=45867>
+##contig=<ID=GL000233.1,length=45941>
+##contig=<ID=GL000204.1,length=81310>
+##contig=<ID=GL000198.1,length=90085>
+##contig=<ID=GL000208.1,length=92689>
+##contig=<ID=GL000191.1,length=106433>
+##contig=<ID=GL000227.1,length=128374>
+##contig=<ID=GL000228.1,length=129120>
+##contig=<ID=GL000214.1,length=137718>
+##contig=<ID=GL000221.1,length=155397>
+##contig=<ID=GL000209.1,length=159169>
+##contig=<ID=GL000218.1,length=161147>
+##contig=<ID=GL000220.1,length=161802>
+##contig=<ID=GL000213.1,length=164239>
+##contig=<ID=GL000211.1,length=166566>
+##contig=<ID=GL000199.1,length=169874>
+##contig=<ID=GL000217.1,length=172149>
+##contig=<ID=GL000216.1,length=172294>
+##contig=<ID=GL000215.1,length=172545>
+##contig=<ID=GL000205.1,length=174588>
+##contig=<ID=GL000219.1,length=179198>
+##contig=<ID=GL000224.1,length=179693>
+##contig=<ID=GL000223.1,length=180455>
+##contig=<ID=GL000195.1,length=182896>
+##contig=<ID=GL000212.1,length=186858>
+##contig=<ID=GL000222.1,length=186861>
+##contig=<ID=GL000200.1,length=187035>
+##contig=<ID=GL000193.1,length=189789>
+##contig=<ID=GL000194.1,length=191469>
+##contig=<ID=GL000225.1,length=211173>
+##contig=<ID=GL000192.1,length=547496>
+##contig=<ID=NC_007605,length=171823>
+##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
+##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
+##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
+##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
+##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
+##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
+##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
+##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
+##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
+##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
+##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
+##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
+##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
+##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
+##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
+##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
+##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
+##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
+##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
+##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
+##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
+##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	GTEX-R55C-0004	GTEX-R55C-0003
+1	16717	STR_2	GGTGGTGGTGGGGGCGGTGGGGGTGGTG	GGTGGTGGTGGGGGCGGTGGTGGTGCTG	.	.	START=16717;END=16744;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
+1	16914	STR_3	CTTCTT	CTTCTTCTT	.	.	START=16914;END=16919;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
+1	19924	STR_4	ATATAT	ATATATAT,ATATATGTAT	.	.	START=19924;END=19929;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pbcurrent b/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pbcurrent
new file mode 120000
index 00000000..058e7018
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pbcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_outputcurrent b/trtools/mergeSTR/tests/mydir/test_hipstr_outputcurrent
new file mode 120000
index 00000000..b9982e6b
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_hipstr_outputcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipstr_output0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_multiple_vcf_typescurrent b/trtools/mergeSTR/tests/mydir/test_multiple_vcf_typescurrent
new file mode 120000
index 00000000..9f822a57
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_multiple_vcf_typescurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_multiple_vcf_types0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_popstr_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_popstr_output0/test.vcf
new file mode 100644
index 00000000..19268514
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_popstr_output0/test.vcf
@@ -0,0 +1,8009 @@
+##fileformat=VCFv4.1
+##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
+##source=PopSTR
+##contig=<ID=chr21,length=46709983>
+##INFO=<ID=Motif,Number=1,Type=String,Description="Microsatellite repeat motif">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth">
+##FORMAT=<ID=PL,Number=G,Type=Integer,Description="PHRED-scaled genotype likelihoods">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA12878	NA12891	NA12892
+chr21	5020351	chr21:5020351:M	GGGGGGGCGGGGGGGGGG	<14>,<17>	.	.	Motif=G	GT:AD:DP:PL	0/2:5,0,11:17:152,197,255,0,90,44	1/2:1,11,6:18:255,84,131,255,0,255	0/0:14,0,0:15:0,44,255,44,255,255
+chr21	5024618	chr21:5024618:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:57,0,3	0/1:5,5:11:61,0,53	0/0:11,1:13:0,12,166
+chr21	5031126	chr21:5031126:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:51,9,0	1/1:0,4:4:66,12,0	0/0:3,0:3:0,9,50
+chr21	5040718	chr21:5040718:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,24:35:255,0,105	0/1:12,13:25:160,0,141	0/0:18,0:19:0,56,255
+chr21	5042862	chr21:5042862:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:116,0,106	0/1:11,6:17:56,0,145	0/0:14,0:16:0,46,255
+chr21	5051279	chr21:5051279:M	TCACTCACTCATTCATCCCACATTCACTCACTCA	<1.8>	.	.	Motif=TCAC	GT:AD:DP:PL	0/1:8,3:11:43,0,165	0/1:4,7:11:142,0,66	0/1:5,7:13:147,0,85
+chr21	5051299	chr21:5051299:M	CATTCACTCACTCATTCATTCATCCCACATTCACTCATTCATTCAT	<4.8>	.	.	Motif=CATT	GT:AD:DP:PL	0/0:2,0:2:0,6,52	0/1:6,3:9:76,0,130	0/1:3,1:4:22,0,67
+chr21	5058258	chr21:5058258:M	TTTTTTTGTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:86,0,12	0/1:6,6:12:68,0,69	0/0:5,0:5:0,15,89
+chr21	5067052	chr21:5067052:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:163,18,0	0/1:8,5:13:99,0,175	0/1:1,1:2:21,0,20
+chr21	5103483	chr21:5103483:M	AAAAAAAAAAAAAAAAAGAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:10:0,29,166	0/0:8,2:12:0,1,119	0/1:4,13:17:174,0,19
+chr21	5103759	chr21:5103759:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<24.5>,<25.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,11,5,0:17:255,68,36,141,0,152,255,72,198,255	2/3:0,1,5,3:9:207,144,125,47,33,23,82,52,0,67	1/1:2,12,0,0:14:169,7,0,175,41,227,208,42,255,255
+chr21	5124343	chr21:5124343:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:8:84,0,12	0/1:8,3:11:19,0,104	0/1:7,2:11:6,0,104
+chr21	5224724	chr21:5224724:M	AAACAAACAAA	<2.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:180,60:256:61,0,255	0/1:172,46:242:27,0,255	0/1:156,91:272:255,0,255
+chr21	5229746	chr21:5229746:M	TTGTTGTTGTTGTT	<4.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:64,30:101:0,1,130	0/1:34,37:82:82,0,20	0/0:59,12:80:0,28,167
+chr21	5230609	chr21:5230609:M	ACACACACACACACACACACACACACACACACAC	<15>,<20>,<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/2:15,0,14,5,7:45:255,255,255,0,190,200,26,236,139,255,100,255,131,255,255	1/4:6,9,0,2,12:30:255,255,255,255,255,255,111,72,255,255,39,0,244,242,223	0/3:27,0,13,17,7:67:255,255,255,152,255,255,0,255,255,255,142,255,255,255,255
+chr21	5230670	chr21:5230670:M	AAAAAAGAAAAAACAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:79,43:122:255,0,255	0/1:72,45:117:255,0,255	0/1:99,20:119:192,0,255
+chr21	5240627	chr21:5240627:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:13,21,20:63:255,32,137,136,0,102	1/2:6,11,26:52:255,124,153,110,0,39	1/2:13,26,35:77:255,128,231,140,0,66
+chr21	5242046	chr21:5242046:M	TCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCT	<12.5>,<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:1,33,6:45:255,44,50,255,0,255	1/2:0,16,11:33:255,95,225,255,0,255	1/2:3,31,7:66:255,19,81,255,0,255
+chr21	5242078	chr21:5242078:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,12:39:77,0,170	1/1:2,10:22:115,4,0	0/1:24,15:56:110,0,240
+chr21	5245137	chr21:5245137:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGT	<14>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,28:82:255,0,255	0/1:19,28:77:255,0,237	0/1:12,44:94:255,0,255
+chr21	5247825	chr21:5247825:M	TTTATTTATTT	<2.5>,<3.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:1,28,9:45:124,41,19,144,0,255	1/2:0,39,16:57:198,101,81,183,0,255	1/2:0,29,15:48:170,101,98,138,0,255
+chr21	5247833	chr21:5247833:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:11,57:76:255,86,0	1/1:7,35:52:255,65,0	1/1:8,80:90:255,154,0
+chr21	5260390	chr21:5260390:M	ATATATATATATATAT	<7>,<9>	.	.	Motif=AT	GT:AD:DP:PL	1/2:5,15,15:36:255,197,255,188,0,255	0/2:4,0,8:12:101,135,255,0,57,33	0/1:23,12,0:35:108,0,255,208,255,255
+chr21	5261573	chr21:5261573:M	TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTT	<16.5>,<17.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/2:0,0,5:16:67,22,68,0,11,16	1/1:0,0,0:5:0,0,0,0,0,0	1/2:0,9,2:30:211,4,92,48,0,46
+chr21	5296708	chr21:5296708:M	ATAATAATAATAATAATAA	<4.7>,<5.3>	.	.	Motif=ATA	GT:AD:DP:PL	1/2:0,4,20:24:255,255,255,84,0,16	1/1:0,4,0:4:116,12,0,96,12,87	2/2:0,3,43:46:255,255,255,134,72,0
+chr21	5327591	chr21:5327591:M	AGTGGAGTGGAGTGGAGTGGAGTTGATCAGAGTGCAGTGGAATTGAATGGAATGGACTGGAATGGAATAGAGTGGAGTGGAGGGGAGTGG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	1/1:0,3:3:36,8,0	0/1:1,3:4:25,0,14	1/1:1,9:10:83,2,0
+chr21	5329879	chr21:5329879:M	GAATGGAATGGAATGGAGTGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	1/1:0,101:101:255,255,0	1/1:0,89:89:255,247,0	1/1:1,106:107:255,255,0
+chr21	5329940	chr21:5329940:M	AATGGAGTGGAATGGAAT	<27>	.	.	Motif=AATGG	GT:AD:DP:PL	0/1:17,101:118:255,0,130	0/1:17,89:106:255,0,167	0/1:17,105:122:255,0,119
+chr21	5329969	chr21:5329969:M	GAGTGGACTGGAGTGGAGTGGAGTTTAGTGGAGTG	<27>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:13,20:33:153,0,247	0/1:4,19:23:169,0,40	0/1:14,26:40:208,0,254
+chr21	5334486	chr21:5334486:M	TTTTTTTTTGTTTGTTTGTTTGTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	.	0/0:1,0:1:0,3,18	1/1:0,17:17:255,50,0
+chr21	5370146	chr21:5370146:M	AAATAATAAATAAATAAATAAATAAA	<7.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:8,1:12:0,19,139	0/1:0,3:6:26,0,20	0/0:9,0:9:0,26,130
+chr21	5448587	chr21:5448587:M	TTTTTTTTTTTTT	<12>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,5,8:24:159,138,224,0,63,255	0/1:17,13,3:33:78,0,129,94,142,255	1/2:9,13,7:29:160,58,111,50,0,255
+chr21	5505757	chr21:5505757:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,2:11:3,0,125	0/1:14,4:18:15,0,181	1/1:0,4:4:69,12,0
+chr21	5511978	chr21:5511978:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,1,3:7:132,92,101,46,0,32	1/2:1,3,1:7:106,33,63,60,0,69	1/2:0,0,5:8:144,124,143,32,0,14
+chr21	5515734	chr21:5515734:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,17:24:248,2,0	0/1:10,8:19:83,0,106	1/1:0,21:22:255,64,0
+chr21	5520202	chr21:5520202:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:2,1:3:2,0,12	0/1:6,3:11:1,0,46	.
+chr21	5520833	chr21:5520833:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,4,0:7:47,8,0,67,20,153	1/2:2,3,4:10:57,51,78,10,0,69	1/1:0,5,0:6:47,13,0,62,15,133
+chr21	5534983	chr21:5534983:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,1:1:5,2,0	0/0:5,2:7:0,3,14	1/1:0,3:3:14,5,0
+chr21	5535008	chr21:5535008:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:87,9,0	0/1:5,4:9:87,0,119	0/1:1,1:3:32,0,21
+chr21	5536014	chr21:5536014:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11:12:220,33,0	1/1:0,9:11:178,27,0	1/1:0,28:29:255,86,0
+chr21	5550856	chr21:5550856:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:6:68,1,0	0/0:5,0:5:0,15,81	0/0:1,0:1:0,3,17
+chr21	5552200	chr21:5552200:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,18:20:255,20,0	0/1:2,2:5:29,0,36	1/1:0,24:25:255,57,0
+chr21	5552591	chr21:5552591:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,3:4:35,8,0	1/1:0,5:7:58,14,0	1/1:0,5:6:58,14,0
+chr21	5555313	chr21:5555313:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:6,11,13:34:130,5,112,9,0,12	0/1:20,7,3:32:32,0,255,27,153,136	0/1:3,17,3:29:210,0,72,114,44,119
+chr21	5557399	chr21:5557399:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:16:158,0,108	0/1:4,6:10:119,0,72	1/1:1,10:12:240,11,0
+chr21	5557715	chr21:5557715:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:21:78,0,255	0/0:14,1:15:0,18,255	0/1:7,6:15:131,0,151
+chr21	5562461	chr21:5562461:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:162,0,96	1/1:1,10:14:218,12,0	0/1:2,10:12:196,0,11
+chr21	5563477	chr21:5563477:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:13,4:18:64,0,255	0/1:13,3:16:31,0,255	0/1:7,6:15:107,0,154
+chr21	5563948	chr21:5563948:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:5:38,0,65	0/1:2,1:6:81,0,49	0/1:2,3:6:91,0,38
+chr21	5564112	chr21:5564112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,10:21:93,0,108	0/1:13,6:20:43,0,135	1/1:3,15:19:191,9,0
+chr21	5580885	chr21:5580885:M	TCTCTCTCTTTCTTTCTTTCCTTCTCTCTCTCT	<4.5>,<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/2:5,0,3:8:57,35,159,0,132,124	0/2:13,1,3:17:83,23,255,0,255,255	1/1:0,4,1:5:215,15,0,51,2,36
+chr21	5582877	chr21:5582877:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,3:3:88,9,0	0/1:0,3:5:74,0,4	1/1:0,1:1:30,3,0
+chr21	5589529	chr21:5589529:M	AAAAGAAAAACAAAAA	<2.8>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:19,0:19:0,53,252	0/1:16,8:24:39,0,145	0/0:15,2:17:0,21,172
+chr21	5592304	chr21:5592304:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:18:38,0,58	0/0:7,0:13:0,26,145	0/1:0,6:10:73,0,17
+chr21	5598766	chr21:5598766:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,12:33:81,0,197	0/0:26,5:31:0,18,255	0/1:21,14:39:90,0,234
+chr21	5613671	chr21:5613671:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	0/1:2,6:19:81,0,11	0/1:4,6:14:73,0,9	1/1:0,10:16:96,1,0
+chr21	5614254	chr21:5614254:M	AGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:13,3:16:27,0,255	0/0:15,0:16:0,31,255	0/1:6,3:10:46,0,126
+chr21	5624629	chr21:5624629:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,9:17:200,0,52	0/1:4,5:13:140,0,43	0/1:6,14:20:234,0,63
+chr21	5625184	chr21:5625184:M	ATTTATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:21,1:22:0,47,194	0/0:21,6:27:0,12,143	0/1:17,9:26:20,0,97
+chr21	5687702	chr21:5687702:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,13:30:255,0,118	0/1:11,15:27:252,0,144	0/1:9,9:18:140,0,132
+chr21	5688257	chr21:5688257:M	ATTTATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:16,5:21:0,6,106	0/0:17,5:22:0,9,114	0/1:20,8:28:5,0,120
+chr21	5693908	chr21:5693908:M	ATTTATTTATTT	<2.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:7,7:16:31,0,16	0/1:7,8:16:31,0,16	1/1:1,11:12:76,20,0
+chr21	5698851	chr21:5698851:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:41:0,66,255	0/1:16,7:27:25,0,128	0/0:30,10:47:0,5,255
+chr21	5711871	chr21:5711871:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,4:4:124,12,0	1/1:0,4:4:119,12,0	1/1:0,4:4:123,12,0
+chr21	5717129	chr21:5717129:M	TTTTTTTTTTTTTTTTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,0,1:4:27,0,20,6,0,22	1/2:0,1,3:5:102,66,65,37,0,27	1/2:0,5,2:9:187,47,30,134,0,125
+chr21	5738430	chr21:5738430:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,2:9:0,4,36	0/0:8,0:13:0,28,96	1/1:0,4:7:41,12,0
+chr21	5745954	chr21:5745954:M	CACACACACACACACACACACACACAC	<14.5>,<15.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:19,2,0:21:0,34,207,57,255,255	0/0:15,4,0:19:0,4,131,45,182,255	1/2:2,5,3:10:77,12,9,24,0,55
+chr21	5757052	chr21:5757052:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,5:25:0,11,166	0/1:7,12:22:73,0,48	0/1:16,7:23:16,0,115
+chr21	5758152	chr21:5758152:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/1:31,10:41:28,0,255	0/0:34,1:35:0,85,255	0/1:31,11:42:37,0,255
+chr21	5762970	chr21:5762970:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,6:18:19,0,86	0/0:19,1:20:0,43,199	0/1:22,8:30:9,0,165
+chr21	5772988	chr21:5772988:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:2,8:11:82,1,0	1/1:3,12:15:119,2,0	1/1:0,17:17:229,48,0
+chr21	5774011	chr21:5774011:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:127,0,91	0/1:8,12:20:147,0,78	0/1:6,15:21:203,0,44
+chr21	5784132	chr21:5784132:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:7:7,0,36	0/0:6,0:7:0,8,63	0/1:6,3:9:13,0,51
+chr21	5790769	chr21:5790769:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,68,255	0/1:9,5:14:42,0,109	0/0:23,2:25:0,39,255
+chr21	5794367	chr21:5794367:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,13:45:80,0,255	0/1:17,16:38:172,0,176	0/0:30,3:33:0,48,255
+chr21	5859014	chr21:5859014:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,1:15:0,26,98,16,76,77	0/1:2,3,0:5:12,0,4,24,13,53	0/2:6,0,3:11:1,16,65,0,29,33
+chr21	5866538	chr21:5866538:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:13,4:17:1,0,110	0/0:17,2:21:0,33,198	0/1:3,4:9:44,0,12
+chr21	5877636	chr21:5877636:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,3:15:0,7,100	0/1:7,7:16:34,0,53	0/1:16,6:22:7,0,117
+chr21	5878736	chr21:5878736:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/1:21,9:30:44,0,218	0/0:33,3:36:0,60,255	0/1:24,12:36:69,0,240
+chr21	5881133	chr21:5881133:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:2,4:6:32,0,8	0/1:3,1:4:1,0,25	.
+chr21	5883554	chr21:5883554:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:13:22,0,56	0/0:28,4:34:0,47,255	0/1:22,10:33:24,0,169
+chr21	5893572	chr21:5893572:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:2,15:17:176,21,0	1/1:2,14:17:158,19,0	1/1:0,14:14:187,39,0
+chr21	5894595	chr21:5894595:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:13:33,0,115	0/1:6,12:18:152,0,49	0/1:6,9:16:119,0,59
+chr21	5904716	chr21:5904716:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,25,113	0/0:5,0:5:0,14,62	0/1:8,4:13:14,0,76
+chr21	5910071	chr21:5910071:M	GGGAGGGGGGAGGGA	<3.5>	.	.	Motif=GGGA	GT:AD:DP:PL	0/0:19,2:21:0,10,255	0/1:8,3:11:43,0,171	0/0:17,0:17:0,51,255
+chr21	5914951	chr21:5914951:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,10,0:33:68,0,255,135,255,255	0/2:12,9,9:31:187,22,124,0,68,255	0/0:40,0,0:41:0,119,255,123,255,255
+chr21	5972367	chr21:5972367:M	TTTTGTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,29,180	0/0:3,0:5:0,14,74	0/1:5,3:8:29,0,64
+chr21	5980542	chr21:5980542:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,11:12:185,17,0	0/1:2,12:16:163,0,11	1/1:1,8:9:127,8,0
+chr21	5981384	chr21:5981384:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:7:34,0,52	0/1:6,1:9:3,0,89	0/0:9,1:13:0,5,140
+chr21	5983797	chr21:5983797:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4,0:10:85,0,115,70,132,199	0/1:1,2,1:5:55,0,16,18,12,44	0/2:2,0,3:5:69,49,92,0,52,45
+chr21	5990439	chr21:5990439:M	TTTTTTTTTTTGTTGTTGTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:17:119,0,91	0/1:6,13:19:174,0,50	0/1:9,3:12:20,0,129
+chr21	5990535	chr21:5990535:M	TTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:15:156,0,174	0/1:3,0:5:13,0,86	0/0:7,0:9:0,9,189
+chr21	5996445	chr21:5996445:M	TTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,6:14:255,111,133,160,0,135	0/1:4,10,2:17:253,0,86,230,33,255	1/2:0,12,3:18:255,60,40,255,0,255
+chr21	6005386	chr21:6005386:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:9,9:18:124,0,121	0/1:9,8:17:98,0,113	0/1:7,14:21:207,0,70
+chr21	6020382	chr21:6020382:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGTGTGTG	<21>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,3:3:95,9,0	0/1:4,5:9:131,0,86	0/1:4,3:8:72,0,102
+chr21	6040905	chr21:6040905:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:26:203,0,128	0/1:10,6:17:65,0,127	0/1:12,10:23:115,0,161
+chr21	6070033	chr21:6070033:M	TGTGTGTGAGGTGTGTGGTGTGTGTG	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,14:33:71,0,255	0/1:30,12:42:19,0,255	0/1:26,16:42:68,0,255
+chr21	6070105	chr21:6070105:M	TGTGTGTGTAGTGTATGTGGTTGTGTG	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,14:36:66,0,255	0/1:27,12:39:31,0,255	0/1:30,16:46:60,0,255
+chr21	6071721	chr21:6071721:M	GGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/1:1,3:4:40,0,5	1/1:0,1:1:17,3,0	1/1:0,3:3:51,9,0
+chr21	6072175	chr21:6072175:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:10:42,0,78	0/0:2,0:2:0,6,34	1/1:0,1:1:18,3,0
+chr21	6073138	chr21:6073138:M	CCCCCCCACCCCCCCCC	<16>,<18>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,16,0:16:216,45,0,255,48,255	1/2:0,3,1:4:41,12,12,38,0,61	1/2:0,3,3:6:62,39,55,39,0,56
+chr21	6075369	chr21:6075369:M	TTTTTTTTTTAGTTTTTTAGTTTTTGTTTTTTTTGCTTTTTTTTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:7:33,0,52	0/0:4,0:4:0,12,69	0/1:1,1:2:12,0,12
+chr21	6097940	chr21:6097940:M	CACACACACACACACACACACACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:28:0,82,255	0/1:16,8:26:62,0,220	0/0:31,1:33:0,79,255
+chr21	6100222	chr21:6100222:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,13,7:21:255,105,63,177,0,180	0/2:22,1,6:31:93,94,255,0,255,255	1/1:2,18,3:23:255,32,0,242,15,255
+chr21	6109896	chr21:6109896:M	GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<27>,<29>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,5,4:10:255,255,255,108,108,88,143,142,0,128	1/2:0,3,4,0:9:211,130,120,81,0,66,209,127,84,209	3/3:0,0,0,6:6:184,184,184,179,179,175,18,18,18,0
+chr21	6132994	chr21:6132994:M	ATATATATATATATATATATATATATA	<12.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:2,0,5:8:137,143,168,0,31,35	1/2:0,6,1:7:97,23,6,90,0,156	0/0:9,0,0:10:0,29,151,30,178,255
+chr21	6222189	chr21:6222189:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,7:38:0,6,255	0/0:35,0:36:0,102,255	0/1:15,14:30:116,0,142
+chr21	6228654	chr21:6228654:M	TTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:8:68,0,52	0/0:4,0:5:0,12,107	0/1:4,2:18:46,0,159
+chr21	6240057	chr21:6240057:M	AGAGAGAGAGAAGGAAAGAAAGAAAGAGAGAGA	<5.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:4,0:5:0,3,94	0/1:9,4:13:111,0,244	.
+chr21	6256852	chr21:6256852:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,17:26:233,0,64	0/1:6,5:11:51,0,68	0/1:17,22:41:255,0,182
+chr21	6257009	chr21:6257009:M	AAAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,4:15:81,58,255,0,220,202	0/1:5,6,0:11:181,0,105,72,120,175	0/2:8,0,5:14:96,60,255,0,208,193
+chr21	6257055	chr21:6257055:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,21:23:255,18,0	1/1:0,5:5:140,15,0	0/1:16,25:46:255,0,255
+chr21	6257476	chr21:6257476:M	ACAACAACAACAACAACAACA	<10>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:5,4:10:86,0,97	0/1:12,2:15:10,0,255	0/1:3,2:9:61,0,59
+chr21	6258497	chr21:6258497:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,12:17:231,0,48	0/1:3,6:10:123,0,41	1/1:0,14:14:255,42,0
+chr21	6263230	chr21:6263230:M	CTGAAACTGAAA	<2.2>	.	.	Motif=CTGAAA	GT:AD:DP:PL	0/1:16,11:28:53,0,104	0/0:16,3:20:0,19,150	0/1:12,11:24:66,0,70
+chr21	6263239	chr21:6263239:M	AAAAGAAAAAAACAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,9:27:252,0,255	0/1:17,2:21:3,0,255	0/1:8,8:16:238,0,190
+chr21	6263552	chr21:6263552:M	TTTTTTTTTTTATTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:13:151,0,78	0/1:3,4:8:94,0,53	0/1:3,6:12:151,0,41
+chr21	6265649	chr21:6265649:M	AAAAAAAAAAAA	<10>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12,9:38:117,0,215,130,17,255	0/0:25,5,2:42:0,9,255,85,218,255	1/2:2,16,13:36:255,81,237,236,0,255
+chr21	6266473	chr21:6266473:M	AAAAAAAAAAAAACAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,8,7:22:247,17,54,35,0,39	0/2:16,1,7:31:84,26,255,0,255,240	0/1:5,7,9:23:232,0,66,1,0,30
+chr21	6268291	chr21:6268291:M	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTCCTTCTTC	<22.7>	.	.	Motif=TCT	GT:AD:DP:PL	1/1:0,3:5:90,9,0	1/1:0,2:5:106,12,0	0/0:0,0:1:0,0,0
+chr21	6268762	chr21:6268762:M	TGTGTGTGTGTG	<7>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,23:23:255,63,0	1/1:0,1:1:11,3,0	1/1:2,24:27:244,39,0
+chr21	6270105	chr21:6270105:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:72,14,0	0/1:3,2:5:14,0,28	0/0:1,0:1:0,3,14
+chr21	6284922	chr21:6284922:M	TGTGTGTGTGTGTGTGTGTGTGTGGTGTGTTTGTGTGT	<17>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,14:14:255,42,0	0/1:5,8:14:130,0,57	1/1:0,23:23:255,68,0
+chr21	6299706	chr21:6299706:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:3,1:5:9,0,29	0/1:4,5:14:67,0,26	.
+chr21	6299731	chr21:6299731:M	TTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3,0:10:13,0,27,31,49,149	0/2:3,1,3:7:55,42,54,0,19,64	0/0:2,0,0:2:0,5,19,6,25,49
+chr21	6300103	chr21:6300103:M	AAAAAAAAAAAAAAGAAAAAGAAAAGAAAAGAAAAAAA	<37>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4,0:6:23,0,4,40,21,125	1/2:3,5,5:14:90,76,114,19,0,115	1/1:0,3,0:5:28,8,0,37,9,78
+chr21	6300733	chr21:6300733:M	CACACACAAACACATCACACACACACACACACACACACA	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:4,0:4:0,10,37	0/1:5,3:8:7,0,26	.
+chr21	6305211	chr21:6305211:M	TTTTTTTTCTTTTTTCTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:17:196,15,0	0/1:4,9:13:107,0,26	1/1:0,20:20:255,58,0
+chr21	6308951	chr21:6308951:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,3:8:142,74,107,80,0,65	0/1:0,2,0:3:51,0,12,54,15,67	1/2:0,0,2:4:49,44,70,12,0,3
+chr21	6315192	chr21:6315192:M	ACACACACACAGACAGACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,5:9:54,0,38	0/1:18,5:23:11,0,211	1/1:0,3:3:47,9,0
+chr21	6320083	chr21:6320083:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,7:36:21,0,255	0/0:19,1:20:0,41,255	0/1:19,9:28:74,0,250
+chr21	6325896	chr21:6325896:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:200,23,0	0/1:19,4:24:6,0,243	0/1:14,4:18:15,0,184
+chr21	6334410	chr21:6334410:M	TTGTTGTATGTTGTTTTATTGTTGCTTTTATTGATGTATGTTGTTTTTTGTTGCTTTTATTGTTGTTGTT	<13.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:5,4:11:91,0,102	0/1:9,2:20:26,0,201	0/1:4,1:7:14,0,89
+chr21	6335235	chr21:6335235:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:19:59,0,97	0/1:13,5:21:10,0,152	0/0:6,0:6:0,17,84
+chr21	6337885	chr21:6337885:M	AAAAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,9,7:27:123,66,137,0,12,255	0/1:20,18,2:43:125,0,139,194,205,255	0/2:14,13,7:36:111,33,137,0,12,255
+chr21	6351126	chr21:6351126:M	AAAATAAAATAAA	<2.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:34,6:40:0,40,255	0/0:37,5:42:0,57,255	0/1:31,16:47:55,0,226
+chr21	6352933	chr21:6352933:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/1:15,16:31:177,0,161	0/1:17,8:25:56,0,200	0/0:19,3:22:0,15,255
+chr21	6356407	chr21:6356407:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:12:218,39,9,169,0,158	1/2:0,1,0:4:62,31,28,29,0,22	1/2:0,2,3:10:202,85,67,109,0,93
+chr21	6371108	chr21:6371108:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>,<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,4,3:23:255,57,46,188,0,132,255,14,163,255	2/3:5,1,3,10:30:115,57,255,16,90,57,28,11,0,13	1/2:3,9,7,1:28:255,43,91,130,0,110,250,22,135,227
+chr21	6374684	chr21:6374684:M	AAAAAAAAAAAAAAGAAAAGAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:70,6:84:0,94,255	0/1:41,17:68:93,0,255	0/0:82,3:93:0,216,255
+chr21	6376674	chr21:6376674:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,116:144:255,255,0	1/1:2,75:138:255,255,0	1/1:0,113:113:255,255,0
+chr21	6441721	chr21:6441721:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:40,0,22	0/1:3,5:8:63,0,28	0/1:2,0:3:1,0,27
+chr21	6444559	chr21:6444559:M	AAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,15:17:255,0,9	0/1:2,12:16:255,0,12	0/0:2,0:4:0,9,73
+chr21	6445451	chr21:6445451:M	GCCAGGCCAGGC	<1.4>	.	.	Motif=GCCAG	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:21,0:21:0,62,255	0/1:10,8:18:97,0,135
+chr21	6452919	chr21:6452919:M	TTTTCTTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:17:147,0,62	0/1:3,8:12:109,0,20	0/0:12,0:12:0,35,217
+chr21	6480511	chr21:6480511:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,72	.	0/1:5,3:10:25,0,76
+chr21	6523931	chr21:6523931:M	AAGAAGAAGAAGAAGAAGAA	<8.7>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:13,9:27:140,0,255	0/1:2,14:18:255,0,15	0/0:17,0:18:0,51,255
+chr21	6544947	chr21:6544947:M	TTTTTCGTTTTTGTTTTTGTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:2,2:4:24,0,24	0/0:11,0:11:0,32,198	0/1:4,6:10:78,0,43
+chr21	6559518	chr21:6559518:M	AATAATAATAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:9,0:9:0,27,253	0/0:8,0:8:0,24,225	0/1:11,12:23:255,0,241
+chr21	6572511	chr21:6572511:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/1:6,3:9:29,0,83	0/0:20,0:20:0,59,255
+chr21	6572679	chr21:6572679:M	TGTGTGTGTGTGTGTGGGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:14,2:16:0,7,231	0/0:11,0:11:0,32,200	1/1:0,7:7:135,21,0
+chr21	6576800	chr21:6576800:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:17:115,0,96	0/0:11,0:11:0,32,192	1/1:1,20:21:255,44,0
+chr21	6632687	chr21:6632687:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5,0:8:185,21,0,174,17,168	1/2:0,3,1:6:107,27,17,78,0,73	1/2:0,3,3:12:252,144,126,93,0,67
+chr21	6637988	chr21:6637988:M	TTTATTTTATTTT	<2.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/0:40,4:44:0,73,255	0/0:33,4:38:0,55,255	0/1:29,14:44:48,0,239
+chr21	6651229	chr21:6651229:M	TTTTTTTTTTTTT	<12>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,5,6:18:111,70,115,0,4,195	0/1:16,14,1:32:92,0,129,159,192,255	1/2:10,15,7:34:184,62,124,64,0,255
+chr21	6653878	chr21:6653878:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:19:31,0,111	0/1:16,6:23:21,0,154	0/0:6,0:6:0,17,83
+chr21	6654647	chr21:6654647:M	AACAACAACAATAAAAGCAACAAAAAACAACATACATCAATAAAAGCAACAATAAAACAACATACAACAA	<13.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:7,7:18:143,0,141	0/1:17,12:36:228,0,255	1/1:1,10:14:239,7,0
+chr21	6660338	chr21:6660338:M	TTTTTTTATTTTATTTTATTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,2:18:0,5,255	0/0:20,1:25:0,38,255	0/1:8,4:12:62,0,148
+chr21	6663216	chr21:6663216:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:166,29,0	0/1:11,5:16:36,0,135	0/1:11,3:15:10,0,146
+chr21	6664000	chr21:6664000:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,3:35:0,58,255	0/0:47,6:53:0,69,255	0/1:29,11:40:36,0,255
+chr21	6666585	chr21:6666585:M	AAAAAAAAAAAAAACAAAAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,54,255	0/0:6,0:6:0,18,155	0/1:11,4:16:55,0,234
+chr21	6669849	chr21:6669849:M	AAAAAACAAAAAACAAACAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:65,0,231	0/1:11,4:15:62,0,251	0/0:5,0:7:0,18,149
+chr21	6673910	chr21:6673910:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,2:11:3,0,125	0/1:13,4:17:17,0,167	1/1:0,5:5:86,15,0
+chr21	6680131	chr21:6680131:M	ACACACACACACACACACACACACACACACACACACACACACACA	<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,5:7:127,18,0	0/1:3,0:7:12,0,50	1/1:0,4:8:107,15,0
+chr21	6683887	chr21:6683887:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<27>,<28>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,8:12:166,96,112,33,0,16	2/2:2,0,16:18:227,233,255,20,52,0	2/2:0,0,15:16:251,240,237,44,35,0
+chr21	6688355	chr21:6688355:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,3:4:20,0,0	0/1:2,1:5:15,0,7	.
+chr21	6688986	chr21:6688986:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,2:9:58,23,24,47,0,137	0/2:5,0,4:13:46,72,137,0,50,65	1/1:0,2,0:3:19,5,0,25,6,50
+chr21	6689379	chr21:6689379:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4,2:9:53,0,35,21,12,27	0/2:4,1,4:10:21,20,92,0,37,21	0/1:4,2,0:7:16,0,69,16,43,45
+chr21	6689395	chr21:6689395:M	AGAGAGAGAGAGAGGGAGAGAGAGAG	<12.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:4,0:9:0,1,83	0/1:4,4:13:56,0,71	0/1:0,0:4:3,0,4
+chr21	6703136	chr21:6703136:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:3,3:6:4,0,4	0/0:3,0:4:0,7,19	1/1:0,1:1:5,2,0
+chr21	6703161	chr21:6703161:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:133,15,0	0/1:4,2:6:36,0,91	0/1:1,1:2:22,0,21
+chr21	6704167	chr21:6704167:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,21:24:255,62,0	1/1:1,9:13:160,10,0	1/1:0,21:21:255,62,0
+chr21	6710597	chr21:6710597:M	AAAAGAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,4:6:118,48,31,23,0,6	1/1:0,0,0:1:18,3,0,13,3,11	1/1:0,3,0:3:84,9,0,44,8,35
+chr21	6720353	chr21:6720353:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,19:20:255,37,0	0/1:3,3:6:47,0,48	0/1:2,22:27:255,0,19
+chr21	6720744	chr21:6720744:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,5:9:58,14,0	1/1:0,4:8:47,11,0	1/1:0,3:4:35,8,0
+chr21	6723466	chr21:6723466:M	TTTTTTTTTTTT	<10>,<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,8,12,5:37:80,17,231,0,76,55,127,102,43,255	0/2:17,1,9,1:28:17,55,255,0,144,85,76,205,100,236	1/3:5,23,1,14:43:255,75,255,245,207,255,255,0,174,255
+chr21	6725552	chr21:6725552:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,9:15:218,0,34	0/1:4,4:10:80,0,89	0/1:4,5:11:116,0,71
+chr21	6725868	chr21:6725868:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,7:27:120,0,255	0/1:9,3:14:49,0,208	0/1:12,9:21:201,0,255
+chr21	6730614	chr21:6730614:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,18:23:255,0,29	0/1:10,6:17:84,0,182	1/1:0,23:24:255,72,0
+chr21	6732265	chr21:6732265:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,15:27:152,0,106	0/1:12,5:17:25,0,129	0/1:3,12:15:138,0,2
+chr21	6828166	chr21:6828166:M	ATGAAGAACTGAATGAATGAATGAATGAATGAATGAAT	<10.5>	.	.	Motif=ATGA	GT:AD:DP:PL	1/1:0,14:14:255,41,0	0/1:15,8:23:78,0,203	0/1:11,6:17:63,0,155
+chr21	6987408	chr21:6987408:M	TTTTTTTATTTTATTTTATTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,4:15:54,0,215	0/0:18,0:21:0,54,255	0/1:6,3:10:46,0,134
+chr21	6990286	chr21:6990286:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:13:121,0,17	0/0:20,4:24:0,4,255	0/1:5,5:10:56,0,56
+chr21	6991070	chr21:6991070:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,4:46:0,75,255	0/0:35,6:41:0,35,255	0/1:35,16:52:81,0,255
+chr21	6993655	chr21:6993655:M	AAAAAAAAAAAAAACAAAAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,51,255	0/0:13,0:14:0,39,255	0/1:8,5:14:97,0,166
+chr21	7000980	chr21:7000980:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,3:14:13,0,155	0/1:18,4:22:4,0,241	1/1:0,5:5:88,15,0
+chr21	7007201	chr21:7007201:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<16.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,5,0,3:13:223,73,91,154,108,174,139,0,81,143	0/1:3,4,0,0:8:110,0,61,68,75,130,119,62,130,175	2/3:1,0,3,3:11:150,131,186,90,153,145,55,41,0,54
+chr21	7010957	chr21:7010957:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:18:255,52,0	0/1:6,19:26:232,0,32	1/1:0,9:9:149,26,0
+chr21	7016056	chr21:7016056:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,5,2:8:50,22,23,38,0,111	0/2:3,1,5:11:71,76,111,0,9,47	1/1:0,3,0:3:28,8,0,37,9,75
+chr21	7016449	chr21:7016449:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:7:1,0,67	0/1:5,2:10:12,0,80	0/1:3,3:6:37,0,37
+chr21	7031236	chr21:7031236:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,13:16:255,39,0	0/1:2,10:12:162,0,4	1/1:0,19:19:255,56,0
+chr21	7046078	chr21:7046078:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:17,3,0	0/1:9,6:15:53,0,102	0/0:4,0:4:0,12,66
+chr21	7047422	chr21:7047422:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,17:17:255,51,0	0/0:2,0:4:0,11,64	1/1:0,29:30:255,71,0
+chr21	7047813	chr21:7047813:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,2:5:23,5,0	1/1:0,1:3:12,3,0	1/1:0,7:7:82,19,0
+chr21	7050535	chr21:7050535:M	TTTTTTTTTTTT	<10>,<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/3:7,15,5,10:37:177,15,205,98,112,152,180,0,70,255	0/2:14,1,9,5:29:14,56,255,0,152,90,42,148,50,173	1/3:4,16,4,13:37:241,67,249,163,168,216,219,0,93,255
+chr21	7052621	chr21:7052621:M	AAAAAAAAAAATAAAAAAAAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,5:9:151,36,30,14,0,15	0/2:3,0,5:9:111,52,93,0,60,61	0/2:2,2,7:11:174,53,62,0,15,21
+chr21	7052937	chr21:7052937:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,7:25:122,0,255	0/0:19,2:21:0,6,255	0/1:8,9:19:196,0,166
+chr21	7057683	chr21:7057683:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,9:12:176,0,34	0/1:2,7:9:129,0,20	1/1:1,11:13:231,12,0
+chr21	7058699	chr21:7058699:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:6,5:11:96,0,120	0/0:16,1:18:0,23,255	0/1:4,2:9:40,0,96
+chr21	7059170	chr21:7059170:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:12:158,0,103	0/1:5,0:6:14,0,126	0/1:1,3:5:75,0,30
+chr21	7059334	chr21:7059334:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,16:29:162,0,116	0/1:12,3:15:1,0,135	0/1:5,10:15:108,0,33
+chr21	7078099	chr21:7078099:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:2,3:6:71,0,44	0/1:1,3:5:78,0,17	1/1:0,1:1:31,3,0
+chr21	7084755	chr21:7084755:M	AAAAGAAAAACAAAAA	<2.8>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:17,2:19:0,29,174	0/1:13,5:18:9,0,102	0/0:19,4:23:0,16,174
+chr21	7087530	chr21:7087530:M	AAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,1,0:7:0,1,58,6,24,33	0/0:3,0,0:5:0,9,49,6,31,23	1/2:3,4,4:15:52,24,119,34,0,57
+chr21	7093992	chr21:7093992:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,5:27:0,5,248	0/0:29,2:31:0,60,255	0/1:14,10:25:73,0,141
+chr21	7103609	chr21:7103609:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:15,6:22:13,0,132	0/0:15,0:15:0,41,178	0/0:17,4:24:0,14,170
+chr21	7108897	chr21:7108897:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>,<8.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	1/2:2,3,3:11:53,15,40,45,0,89	1/1:1,4,0:8:55,7,0,72,18,119	1/1:0,9,1:10:95,17,0,110,8,178
+chr21	7119855	chr21:7119855:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,9:15:185,0,38	0/1:6,6:14:130,0,80	0/1:4,12:16:209,0,34
+chr21	7126061	chr21:7126061:M	ATTTATTTATTT	<2.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:9,4:14:9,0,34	0/1:9,7:16:16,0,30	1/1:6,14:22:68,4,0
+chr21	7134149	chr21:7134149:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,7:26:85,0,255	0/1:15,15:36:246,0,249	0/1:27,9:45:111,0,255
+chr21	7144022	chr21:7144022:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,7:7:204,21,0	1/1:0,1:1:32,3,0	1/1:0,5:5:149,15,0
+chr21	7149280	chr21:7149280:M	TTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,18	0/0:0,0:1:0,3,18	0/1:0,3:7:84,0,12
+chr21	7232451	chr21:7232451:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:31,8,0	0/1:1,1:2:5,0,5	0/1:2,2:6:19,0,6
+chr21	7234039	chr21:7234039:M	TTGTGTTGTGT	<1.8>	.	.	Motif=TTGTG	GT:AD:DP:PL	0/1:59,17:76:237,0,255	0/0:49,0:49:0,147,255	0/1:43,46:89:255,0,255
+chr21	7257612	chr21:7257612:M	AGTGGAGTGGAGTGGAGTGGAGTTGATCAGAGTGCAGTGGAATTGAATGGAATGGACTGGAATGGAATAGAGTGGAGTGGAGGGGAGTGG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	0/1:2,12:14:102,0,11	1/1:1,13:14:128,14,0	1/1:1,14:15:140,16,0
+chr21	7258025	chr21:7258025:M	GGAATGGAAATGAATGGAATGGAATGGAATG	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:40,340:461:255,0,255	0/1:27,375:508:255,0,255	0/1:46,431:542:255,0,255
+chr21	7261697	chr21:7261697:M	GAATGGAATGGAATGGAGTGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	0/1:62,168:230:255,0,255	0/1:29,177:206:255,0,209	0/1:68,228:296:255,0,255
+chr21	7261758	chr21:7261758:M	AATGGAGTGGAATGGAAT	<27>	.	.	Motif=AATGG	GT:AD:DP:PL	0/1:148,167:315:255,0,255	0/1:123,177:300:255,0,255	0/1:130,225:355:255,0,255
+chr21	7261787	chr21:7261787:M	GAGTGGACTGGAGTGGAGTGGAGTTTAGTGGAGTG	<27>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:39,29:68:161,0,255	0/1:28,27:55:175,0,255	0/1:37,49:86:255,0,255
+chr21	7301246	chr21:7301246:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:37,17:56:12,0,207	1/1:3,26:31:219,50,0	0/0:50,1:63:0,147,255
+chr21	7304153	chr21:7304153:M	AAATAATAAATAAATAAATAAATAAA	<6>,<7.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:18,7,8:42:0,38,220,15,134,255	1/2:0,5,10:18:99,95,148,30,0,65	0/0:43,6,0:60:0,83,255,160,255,255
+chr21	7318946	chr21:7318946:M	AATAATAATAAAATAAAATAAAATAAAATAAA	<7.6>	.	.	Motif=AATAA	GT:AD:DP:PL	0/1:25,16:41:153,0,255	0/1:15,13:29:140,0,169	0/0:37,5:45:0,35,255
+chr21	7382758	chr21:7382758:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,2:9:9,0,95	0/1:14,9:23:83,0,165	1/1:0,3:3:52,9,0
+chr21	7388979	chr21:7388979:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,2,3:7:135,94,98,48,0,33	0/1:5,4,0:11:92,0,124,109,108,205	2/2:0,0,6:6:128,140,168,18,18,0
+chr21	7392735	chr21:7392735:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,14:20:215,7,0	0/1:4,16:21:207,0,3	1/1:2,15:17:214,17,0
+chr21	7397203	chr21:7397203:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:7:11,0,20	0/1:3,5:9:33,0,5	0/0:0,0:1:0,2,9
+chr21	7397834	chr21:7397834:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:13,0,13	0/0:6,2:11:0,4,44	1/1:0,5:6:56,15,0
+chr21	7398227	chr21:7398227:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3,0:9:32,0,55,25,38,48	0/2:6,1,3:10:11,14,102,0,46,31	0/1:1,2,0:3:28,0,10,17,8,19
+chr21	7412009	chr21:7412009:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:79,9,0	0/1:2,3:6:65,0,40	.
+chr21	7413015	chr21:7413015:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:21:255,56,0	0/1:2,9:14:147,0,8	1/1:0,24:25:255,74,0
+chr21	7429200	chr21:7429200:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,7:7:156,21,0	0/1:3,4:7:67,0,45	1/1:0,27:28:255,76,0
+chr21	7429591	chr21:7429591:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<23.7>,<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/2:0,0,2:7:90,20,5,71,0,65	1/2:0,0,2:3:39,20,17,19,0,13	1/2:0,3,4:7:115,40,31,75,0,63
+chr21	7432313	chr21:7432313:M	TTTTTTTTTTTT	<10>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,15,3:29:183,0,78,225,36,255	0/0:22,4,4:33:0,21,255,46,171,207	1/2:1,19,14:37:255,102,238,255,0,255
+chr21	7434399	chr21:7434399:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:19:238,0,107	0/1:3,5:9:114,0,49	0/1:4,6:13:136,0,70
+chr21	7434715	chr21:7434715:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:25:219,0,255	0/1:20,3:23:16,0,255	0/1:5,4:15:105,0,101
+chr21	7439461	chr21:7439461:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,8:14:156,0,55	1/1:0,2:2:44,6,0	1/1:2,15:17:255,4,0
+chr21	7440477	chr21:7440477:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:9,3:13:51,0,189	0/0:9,1:11:0,2,200	0/1:6,7:16:147,0,127
+chr21	7440948	chr21:7440948:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:9:54,0,144	0/1:3,0:6:20,0,76	0/1:2,3:7:96,0,34
+chr21	7441112	chr21:7441112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,18:32:183,0,122	0/1:7,6:13:51,0,66	0/1:12,16:29:158,0,108
+chr21	7455244	chr21:7455244:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAAAAA	<53>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:28,9,0	1/1:0,1:3:7,2,0	1/1:0,2:3:14,4,0
+chr21	7457885	chr21:7457885:M	TCTCTCTCTTTCTTTCTTTCCTTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:4,1:6:48,0,108	0/1:5,2:8:76,0,191	1/1:0,3:3:82,9,0
+chr21	7458909	chr21:7458909:M	TTTATTTATCTGTTTATTTACTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:10,1:11:0,16,144	0/1:7,3:10:18,0,79	0/1:4,2:6:14,0,45
+chr21	7459877	chr21:7459877:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,1:1:26,3,0	1/1:0,1:1:26,3,0	1/1:0,4:4:95,12,0
+chr21	7469308	chr21:7469308:M	AAAAAAAAAAAAA	<11>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8,3:17:91,0,42,50,1,193	0/2:4,0,3:9:81,94,148,0,63,77	0/2:4,3,2:14:50,28,88,0,20,92
+chr21	7475770	chr21:7475770:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,7:29:19,0,237	0/1:16,6:22:22,0,163	0/1:17,25:46:228,0,157
+chr21	7485387	chr21:7485387:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	0/0:14,3:18:0,13,144	0/0:20,0:21:0,57,248	0/1:14,6:20:17,0,113
+chr21	7490675	chr21:7490675:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	0/1:4,8:14:70,0,12	0/1:4,6:10:43,0,19	1/1:0,9:13:127,25,0
+chr21	7551450	chr21:7551450:M	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<7>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:3,9:12:107,0,12	1/1:2,12:14:151,10,0	1/1:0,27:27:255,78,0
+chr21	7561497	chr21:7561497:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,6:24:3,0,138	0/0:19,3:22:0,26,177	0/0:19,6:26:0,3,156
+chr21	7563872	chr21:7563872:M	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTGTTTTATTTTATTTTA	<10.4>	.	.	Motif=TATTT	GT:AD:DP:PL	0/1:3,5:8:40,0,15	0/1:3,2:5:11,0,23	0/1:4,3:9:22,0,27
+chr21	7567415	chr21:7567415:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,9:23:38,0,93	0/1:13,7:21:21,0,96	0/1:16,10:27:38,0,115
+chr21	7578497	chr21:7578497:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:20:0,54,232	0/1:10,5:15:18,0,77	0/1:7,5:16:57,0,41
+chr21	7586029	chr21:7586029:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:8:5,0,22	0/0:1,0:4:0,6,19	0/1:2,1:4:7,0,7
+chr21	7587421	chr21:7587421:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,3:21:0,3,255	0/1:7,3:11:28,0,105	0/1:8,4:17:34,0,147
+chr21	7607157	chr21:7607157:M	CACACACACACA	<7>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,9:31:66,0,255	0/0:32,5:39:0,31,255	0/0:39,4:44:0,61,255
+chr21	7607327	chr21:7607327:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,4:5:109,11,0	0/1:0,0:3:1,0,5
+chr21	7612522	chr21:7612522:M	AAAGAAAGAAAGAAAAAAGAAGAGAGAAAGAAAGAAGGAAAGAAAGAGAGAAAGAAAGAAGACAGAAAAGGAAAGAAAGAAAGAAA	<15.2>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,2:5:35,0,66	1/1:0,5:6:130,15,0	0/1:4,6:10:125,0,77
+chr21	7613641	chr21:7613641:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:11:6,0,112	0/1:2,3:6:38,0,20	0/1:6,2:8:11,0,82
+chr21	7636763	chr21:7636763:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,11:23:246,0,58	0/1:7,8:16:130,0,97	0/1:9,10:20:148,0,140
+chr21	7647685	chr21:7647685:M	ATAATCATAATCATAATCATAATCATAATCATAATCATAATCATAA	<6.7>,<8.7>	.	.	Motif=ATAATC	GT:AD:DP:PL	1/1:2,9,1:17:121,8,0,150,21,255	0/1:4,11,0:18:111,0,1,155,41,255	1/2:0,7,3:10:94,35,40,84,0,134
+chr21	7662620	chr21:7662620:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:25:0,71,255	0/0:21,4:25:0,15,240	0/1:12,13:27:110,0,118
+chr21	7669085	chr21:7669085:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,1:18:0,19,162	0/0:9,0:10:0,26,144	0/1:6,6:17:51,0,100
+chr21	7756074	chr21:7756074:M	AAAAAAAAAAAACAAAAAAAACCAAAAAAAAAAACCAAAAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,3:11:20,0,108	0/0:20,0:22:0,64,255	0/0:17,1:18:0,36,255
+chr21	7762615	chr21:7762615:M	ACACACACACACACACACACACCGCACACACACACA	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,255	0/1:7,5:12:54,0,90	0/0:16,0:17:0,50,255
+chr21	7772844	chr21:7772844:M	AAAAAAAGAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:13:56,0,115	0/1:8,10:18:127,0,91	0/1:10,7:18:87,0,134
+chr21	7773308	chr21:7773308:M	TTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:19:246,0,140	0/1:6,9:16:195,0,131	0/1:12,8:21:155,0,255
+chr21	7784201	chr21:7784201:M	CACACACACGCGCACACACACACACACACACACACACACACACACACACA	<26>	.	.	Motif=CA	GT:AD:DP:PL	0/1:8,5:13:51,0,104	0/1:0,1:2:11,0,5	0/0:9,0:10:0,29,167
+chr21	7788458	chr21:7788458:M	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	<6.2>,<9.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/2:0,2,3:5:103,57,75,54,0,45	0/1:5,5,0:10:117,0,116,131,89,208	1/2:0,4,8:12:235,148,197,107,0,84
+chr21	7788509	chr21:7788509:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:24,0,16	0/0:6,0:7:0,19,78	0/1:2,3:5:21,0,9
+chr21	7801440	chr21:7801440:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8:20:128,0,131	0/1:14,9:24:93,0,196	0/1:12,12:26:166,0,161
+chr21	7809419	chr21:7809419:M	TGTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,10:21:136,0,123	0/1:5,4:9:44,0,61	0/1:8,4:12:36,0,109
+chr21	7814549	chr21:7814549:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:9:59,0,116	0/0:3,0:5:0,9,83	0/0:8,0:8:0,24,223
+chr21	7820840	chr21:7820840:M	TTTATTTATTTATTTATTTATTTATTTA	<11>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/1:10,4:14:71,0,239	0/0:17,0:17:0,51,255
+chr21	7822727	chr21:7822727:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,16:22:230,0,37	0/1:10,13:23:160,0,107	0/0:15,0:15:0,44,255
+chr21	7825171	chr21:7825171:M	AAAAAAAAAAAAAAAGAAACAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:12:105,0,4	1/1:1,9:10:128,13,0	0/1:12,13:27:141,0,124
+chr21	7839019	chr21:7839019:M	AAACAAACAAACAAACA	<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,20:20:255,60,0	0/1:11,9:20:193,0,250
+chr21	7847038	chr21:7847038:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,21:21:255,62,0	0/1:13,14:27:187,0,165
+chr21	7851469	chr21:7851469:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:30,0,6	1/1:0,3:3:48,9,0	1/1:1,5:6:67,1,0
+chr21	7860950	chr21:7860950:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:11,0:11:0,33,210	0/0:13,0:14:0,41,244	0/1:3,6:10:83,0,36
+chr21	7915776	chr21:7915776:M	ATTCCATTCCATTC	<27>	.	.	Motif=ATTCC	GT:AD:DP:PL	0/1:119,133:252:255,0,255	0/1:132,147:279:255,0,255	0/1:124,135:259:255,0,255
+chr21	7915808	chr21:7915808:M	TCCATTCCATTCCTTTCCATTCC	<27>	.	.	Motif=TCCAT	GT:AD:DP:PL	0/1:70,134:204:255,0,255	0/1:64,148:212:255,0,255	0/1:62,136:198:255,0,255
+chr21	7957981	chr21:7957981:M	TTCCATTCCACTCCACTCAATTCCATTCCCTTCCATTCTGTTCCATTCCGTTTCATTCCA	<27>	.	.	Motif=TTCCA	GT:AD:DP:PL	0/1:49,52:103:255,0,255	0/1:66,68:135:255,0,255	0/1:62,44:108:219,0,255
+chr21	8108887	chr21:8108887:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:7:0,17,60	0/0:5,1:9:0,10,51	0/1:2,3:8:8,0,22
+chr21	8109940	chr21:8109940:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,3:3:89,9,0	1/1:0,3:3:90,9,0	1/1:0,5:5:156,15,0
+chr21	8113624	chr21:8113624:M	ATATAAATATACATATATATAT	<3.5>	.	.	Motif=ATATAA	GT:AD:DP:PL	0/0:20,0:20:0,57,255	0/1:12,4:16:13,0,131	0/1:27,9:36:29,0,255
+chr21	8127279	chr21:8127279:M	TTTTTTTTTTTTTTGTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:35:0,36,226	0/1:16,8:29:47,0,78	0/0:27,0:38:0,6,170
+chr21	8144024	chr21:8144024:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:20,2:22:0,36,219	0/1:14,6:20:17,0,112	0/1:5,6:12:50,0,27
+chr21	8155122	chr21:8155122:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,3:19:0,17,146	0/1:12,5:19:5,0,102	0/1:15,8:24:25,0,113
+chr21	8158619	chr21:8158619:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:4,4:8:27,0,27	0/1:1,1:2:7,0,7	0/1:1,1:3:9,0,5
+chr21	8161040	chr21:8161040:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,5:18:8,0,98	0/0:17,4:21:0,12,144	0/0:14,2:17:0,23,144
+chr21	8171058	chr21:8171058:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:1,8:10:95,12,0	1/1:4,19:23:198,12,0	1/1:0,14:14:188,39,0
+chr21	8172081	chr21:8172081:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:24:144,0,145	0/1:5,15:21:205,0,24	0/1:6,16:23:224,0,38
+chr21	8182202	chr21:8182202:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:30,0,44	0/1:6,2:8:3,0,52	0/1:7,4:11:20,0,57
+chr21	8188839	chr21:8188839:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,3:26:0,24,255	0/1:9,4:14:30,0,111	0/0:24,3:27:0,27,255
+chr21	8192437	chr21:8192437:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:34:46,0,255	0/1:11,13:28:152,0,109	0/0:37,6:45:0,30,255
+chr21	8195715	chr21:8195715:M	TTTTTTTTTTTTTTTTTTTTCTTTTTT	<28>,<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,14,2:20:199,0,9,161,33,253	0/2:3,3,3:9:62,7,30,0,7,62	0/1:4,10,2:18:142,0,19,95,24,183
+chr21	8200710	chr21:8200710:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:9:24,0,74	0/0:5,0:5:0,15,80	0/1:2,3:5:35,0,18
+chr21	8202105	chr21:8202105:M	AAGAAAAGAAAA	<27>	.	.	Motif=AAGAA	GT:AD:DP:PL	0/0:16,1:17:0,39,255	0/1:12,9:21:46,0,255	0/0:18,4:22:0,18,255
+chr21	8202867	chr21:8202867:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<17.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:67,39:212:229,0,255	0/1:129,51:302:129,0,255	0/1:34,58:182:255,0,255
+chr21	8204667	chr21:8204667:M	CCTCCCTCCCTCCCTCCCTCCCTCCCTGCTCCCTTCCCTCCCTCCTTCCCT	<14.8>	.	.	Motif=CCTC	GT:AD:DP:PL	0/1:58,10:76:41,0,255	0/0:49,0:60:0,170,255	0/1:29,10:39:136,0,255
+chr21	8211687	chr21:8211687:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>,<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:171,195,122:584:255,0,255,255,255,255	0/2:209,195,225:797:255,255,255,0,255,255	0/1:257,297,146:815:255,0,255,255,255,255
+chr21	8212486	chr21:8212486:M	GGGGGGGGGCGGGGGG	<15>	.	.	Motif=G	GT:AD:DP:PL	1/1:4,2277:2447:255,255,0	1/1:5,2047:2290:255,255,0	1/1:21,3722:3839:255,255,0
+chr21	8213330	chr21:8213330:M	CCTCCTCCTCC	<3.3>	.	.	Motif=CCT	GT:AD:DP:PL	0/1:121,96:217:255,0,255	0/1:117,86:203:255,0,255	0/1:89,178:267:255,0,255
+chr21	8214735	chr21:8214735:M	GGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG	<10.7>,<11.7>	.	.	Motif=GGC	GT:AD:DP:PL	0/1:137,165,86:499:255,0,255,255,255,255	0/1:157,129,66:435:255,0,255,255,255,255	0/2:143,35,154:353:255,255,255,0,255,255
+chr21	8216067	chr21:8216067:M	CCCCCGCCCCCCCCCC	<17>	.	.	Motif=C	GT:AD:DP:PL	0/1:99,38:142:229,0,255	0/1:133,31:169:3,0,255	0/1:112,26:142:16,0,255
+chr21	8217209	chr21:8217209:M	CCCCCCCCCACCCCAC	<3>	.	.	Motif=CCCCA	GT:AD:DP:PL	1/1:25,214:304:255,255,0	0/1:36,83:140:255,0,60	1/1:23,210:280:255,255,0
+chr21	8218942	chr21:8218942:M	CGCGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:1596,264:2059:255,0,255	0/1:1183,547:1917:255,0,255	0/1:2634,345:3129:255,0,255
+chr21	8219904	chr21:8219904:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCT	<11.5>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:426,375:1393:255,0,255	0/1:343,594:1622:255,0,255	0/1:734,217:1652:255,0,255
+chr21	8220187	chr21:8220187:M	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	<6.2>,<7.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:8,220,368:1221:255,255,255,255,0,255	1/2:4,573,642:1580:255,255,255,255,0,255	1/2:7,569,333:1565:255,255,255,255,0,255
+chr21	8220689	chr21:8220689:M	TTTTTTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:164,99:387:255,0,255	0/1:58,70:304:255,0,255	0/0:321,13:459:0,255,255
+chr21	8220758	chr21:8220758:M	TCTCGCTCTCGCTCTC	<1.3>	.	.	Motif=TCTCGC	GT:AD:DP:PL	0/1:1930,646:2576:255,0,255	0/1:1973,593:2567:255,0,255	0/0:2435,288:2728:0,255,255
+chr21	8221788	chr21:8221788:M	ACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<30>	.	.	Motif=AC	GT:AD:DP:PL	0/1:50,95:371:255,0,255	0/1:48,30:368:255,0,255	0/1:131,98:503:255,0,255
+chr21	8222183	chr21:8222183:M	GGTGGGGTGGGGTG	<5.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,1:4:25,0,30	1/1:0,4:4:110,12,0
+chr21	8222330	chr21:8222330:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<11>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:46,66:367:255,0,255	0/1:31,159:371:255,0,255	0/1:179,30:376:255,0,255
+chr21	8222802	chr21:8222802:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<13.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:27,172,163:545:255,255,255,255,0,255	1/2:53,236,82:707:255,255,255,255,0,255	0/2:156,50,131:676:255,255,255,0,255,255
+chr21	8223498	chr21:8223498:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<11.7>,<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/2:0,11,18:47:255,255,255,255,0,255	1/2:1,7,10:26:255,255,255,234,0,199	2/2:0,2,32:52:255,255,255,97,14,0
+chr21	8224496	chr21:8224496:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<19>	.	.	Motif=TC	GT:AD:DP:PL	0/1:249,306:1763:255,0,255	0/1:177,719:2098:255,0,255	0/1:259,102:1844:255,0,255
+chr21	8225211	chr21:8225211:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<11.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:718,133:1129:255,0,255	0/1:480,175:925:255,0,255	0/1:463,279:1104:255,0,255
+chr21	8226071	chr21:8226071:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<14.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:304,564:1442:255,0,255	0/1:481,795:1718:255,0,255	0/1:324,930:2005:255,0,255
+chr21	8228131	chr21:8228131:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,112,57:175:255,255,255,255,0,255	1/2:0,90,44:144:255,255,255,255,0,255	1/2:0,149,55:210:255,255,255,255,0,255
+chr21	8231395	chr21:8231395:M	GAGAAGAGAGGAGAGAGAGAGAGAGACGGGGAGAGAGGGGGGAGAGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGA	<67.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,187:187:255,255,0	1/1:0,189:195:255,255,0	1/1:0,166:172:255,255,0
+chr21	8239234	chr21:8239234:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,3:13:168,95,80,58,0,39	1/2:1,2,7:13:228,171,186,24,0,24	1/2:0,4,4:11:212,103,87,103,0,88
+chr21	8243074	chr21:8243074:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:17,43:87:255,0,245	0/1:13,39:70:255,0,223	1/1:9,90:119:255,73,0
+chr21	8245701	chr21:8245701:M	ATACAATACAATACGATACGATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATAC	<12.8>	.	.	Motif=ATACA	GT:AD:DP:PL	0/1:54,195:337:255,0,255	0/1:27,165:446:255,0,255	0/1:77,160:393:255,0,255
+chr21	8246914	chr21:8246914:M	TTTCTTTCTTTCTTTCTTTATTACTTTCTCTTTTTCTT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:964,316:1292:255,0,255	0/1:943,415:1370:255,0,255	0/1:1109,542:1674:255,0,255
+chr21	8247291	chr21:8247291:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:37,72:279:255,0,255	0/1:28,26:219:255,0,255	0/1:59,64:328:255,0,255
+chr21	8253488	chr21:8253488:M	CGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:17,4:21:6,0,217	0/1:13,12:26:119,0,131	0/0:16,0:16:0,47,255
+chr21	8253712	chr21:8253712:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:34,19:59:255,0,255	0/1:86,21:125:194,0,255	0/1:19,16:44:255,0,255
+chr21	8255893	chr21:8255893:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/1:51,90:212:255,0,255	0/1:101,92:304:255,0,255	0/1:138,117:362:255,0,255
+chr21	8256698	chr21:8256698:M	GGGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:3,13:18:255,0,39	0/1:4,6:11:119,0,81	0/1:3,1:4:16,0,67
+chr21	8327069	chr21:8327069:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:21,3:25:0,32,229	0/1:16,8:24:29,0,125	0/1:4,5:9:35,0,23
+chr21	8338167	chr21:8338167:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,5:23:0,7,142	0/1:6,4:11:14,0,45	0/1:12,11:24:56,0,76
+chr21	8339267	chr21:8339267:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/0:26,3:29:0,40,255	0/0:31,1:32:0,77,255	0/1:30,10:40:29,0,255
+chr21	8341664	chr21:8341664:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:3,4:8:32,0,16	0/1:2,3:5:22,0,10	0/1:1,0:3:2,0,6
+chr21	8344085	chr21:8344085:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,9:26:42,0,111	0/0:26,4:30:0,36,246	0/1:18,10:29:35,0,135
+chr21	8354103	chr21:8354103:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:0,8:10:110,23,0	0/1:6,15:21:141,0,21	1/1:0,15:15:204,42,0
+chr21	8355126	chr21:8355126:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,11:21:145,0,100	0/1:11,13:24:152,0,118	0/1:7,11:18:140,0,70
+chr21	8375482	chr21:8375482:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,11:41:74,0,255	0/1:18,11:33:113,0,204	0/0:39,2:43:0,92,255
+chr21	8377740	chr21:8377740:M	TTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:71,0,44	0/1:5,1:8:10,0,134	0/0:5,0:9:0,26,204
+chr21	8378760	chr21:8378760:M	TTTTTTTTTTTTTTTTTTTTCTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10,2:21:116,0,80,106,73,255	0/2:3,1,3:8:74,59,91,0,29,74	0/1:9,8,0:18:91,0,96,131,145,255
+chr21	8383755	chr21:8383755:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:16:15,0,154	0/1:8,6:16:62,0,85	0/0:11,2:13:0,5,147
+chr21	8385914	chr21:8385914:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<17.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:64,58:227:255,0,255	0/1:111,59:296:255,0,255	0/1:31,57:178:255,0,255
+chr21	8392532	chr21:8392532:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:21,6:28:81,0,255	0/1:94,20:115:162,0,255	0/1:33,15:53:246,0,255
+chr21	8394722	chr21:8394722:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>,<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:170,179,120:554:255,0,255,255,255,255	0/2:211,203,214:784:255,255,255,0,255,255	0/1:282,344,149:888:255,0,255,255,255,255
+chr21	8395521	chr21:8395521:M	GGGGGGGGGCGGGGGG	<15>	.	.	Motif=G	GT:AD:DP:PL	1/1:5,2318:2504:255,255,0	1/1:10,2064:2322:255,255,0	1/1:18,3744:3867:255,255,0
+chr21	8397769	chr21:8397769:M	GGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG	<10.7>,<11.7>	.	.	Motif=GGC	GT:AD:DP:PL	0/1:38,28,20:109:255,0,255,255,255,255	0/1:38,30,10:93:255,0,255,255,255,255	0/2:28,12,31:78:255,220,255,0,255,255
+chr21	8399101	chr21:8399101:M	CCCCCGCCCCCCCCCC	<17>	.	.	Motif=C	GT:AD:DP:PL	0/1:134,47:184:244,0,255	0/0:195,23:233:0,255,255	0/1:124,29:159:9,0,255
+chr21	8400242	chr21:8400242:M	CCCCCCCCCCCACCCC	<15>,<20>	.	.	Motif=C	GT:AD:DP:PL	1/2:16,62,47:173:255,255,255,255,0,255	0/2:88,40,61:235:255,255,255,0,255,255	1/2:24,44,74:194:255,255,255,255,0,255
+chr21	8402416	chr21:8402416:M	CTCTCGCTCTCTCTCTGTCTCT	<67.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,44:44:255,121,0	1/1:0,40:40:255,110,0	1/1:0,20:20:237,55,0
+chr21	8402454	chr21:8402454:M	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	<7.2>,<8.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:0,32,30:91:255,255,255,255,0,255	1/2:0,80,37:171:255,255,169,255,0,255	1/2:0,53,22:129:255,255,118,255,0,255
+chr21	8402956	chr21:8402956:M	TTTTTTTTTTTTTTTTTTT	<24>,<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,29,18,20:76:255,255,255,255,80,255,255,0,233,255	1/3:0,31,40,55:141:255,255,255,255,255,255,255,0,2,255	1/3:0,58,17,50:147:255,255,255,255,255,255,255,0,255,255
+chr21	8402972	chr21:8402972:M	TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,41:41:255,112,0	1/1:0,79:79:255,216,0	1/1:0,51:51:255,140,0
+chr21	8403707	chr21:8403707:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:20,33:85:206,0,255	0/1:15,82:128:255,0,237	0/1:25,44:80:255,0,255
+chr21	8404787	chr21:8404787:M	ACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<30>	.	.	Motif=AC	GT:AD:DP:PL	0/1:32,92:353:255,0,255	0/1:59,51:407:255,0,255	0/1:109,86:460:255,0,255
+chr21	8405182	chr21:8405182:M	GGTGGGGTGGGGTG	<5.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	0/1:0,1:2:22,0,11	0/1:0,0:3:4,0,22	0/1:1,4:6:100,0,23
+chr21	8405329	chr21:8405329:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<12>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:45,120:317:255,0,255	0/1:41,72:305:255,0,255	0/1:212,49:396:255,0,255
+chr21	8405574	chr21:8405574:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<27.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:145,321:869:255,0,255	0/1:178,287:861:255,0,255	0/1:107,56:842:255,0,255
+chr21	8405801	chr21:8405801:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<13.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:40,111,194:576:255,255,255,255,0,255	1/2:70,227,119:809:255,255,255,255,0,255	1/2:166,47,151:808:255,255,255,205,0,255
+chr21	8406497	chr21:8406497:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<11.7>,<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/2:0,10,9:32:255,247,209,255,0,255	1/2:0,7,8:27:255,221,220,204,0,185	2/2:0,0,24:36:255,255,255,65,5,0
+chr21	8407495	chr21:8407495:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<19>	.	.	Motif=TC	GT:AD:DP:PL	0/1:256,282:1794:255,0,255	0/1:188,721:2125:255,0,255	0/1:253,120:1808:255,0,255
+chr21	8408210	chr21:8408210:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<11.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:706,131:1121:255,0,255	0/1:540,198:1000:255,0,255	0/1:463,283:1094:255,0,255
+chr21	8409070	chr21:8409070:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<14.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:271,550:1400:255,0,255	0/1:501,750:1690:255,0,255	0/1:339,888:1944:255,0,255
+chr21	8411130	chr21:8411130:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,96,45:143:255,255,255,255,0,255	1/2:0,88,49:146:255,255,255,255,0,255	1/2:0,129,58:192:255,255,255,255,0,255
+chr21	8422258	chr21:8422258:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,0:3:8,10,37,0,28,25	1/2:0,2,3:5:131,79,73,51,0,42	1/1:0,3,0:5:91,10,0,79,0,77
+chr21	8426098	chr21:8426098:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:19,41:93:255,0,255	0/1:9,48:81:255,0,94	1/1:11,106:145:255,81,0
+chr21	8428725	chr21:8428725:M	ATACAATACAATACGATACGATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATAC	<12.8>	.	.	Motif=ATACA	GT:AD:DP:PL	0/1:51,197:347:255,0,255	0/1:50,167:477:255,0,255	0/1:92,234:474:255,0,255
+chr21	8429938	chr21:8429938:M	TTTCTTTCTTTCTTTCTTTATTACTTTCTCTTTTTCTT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:978,337:1326:255,0,255	0/1:906,441:1360:255,0,255	0/1:1156,522:1693:255,0,255
+chr21	8429966	chr21:8429966:M	TCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	<17.3>	.	.	Motif=TCT	GT:AD:DP:PL	0/1:118,119:460:255,0,255	0/1:83,57:501:255,0,255	0/1:175,122:1001:255,0,255
+chr21	8430315	chr21:8430315:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:45,68:256:255,0,255	0/1:20,17:185:255,0,255	0/1:66,58:322:255,0,255
+chr21	8432061	chr21:8432061:M	CTCCCTCCCTCACTCCCTCCCTCCCTCCCTCCCT	<5.5>,<7.5>	.	.	Motif=CTCC	GT:AD:DP:PL	2/2:0,0,13:14:218,254,255,38,39,0	0/2:1,0,1:2:10,16,52,0,16,10	1/2:0,9,4:14:255,68,72,230,0,210
+chr21	8436522	chr21:8436522:M	CGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/0:16,3:19:0,5,209	0/1:7,9:16:97,0,65	0/0:20,3:24:0,16,255
+chr21	8436746	chr21:8436746:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:18,16:40:255,0,255	0/1:130,31:178:255,0,255	0/1:18,18:42:255,0,255
+chr21	8438935	chr21:8438935:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/1:137,245:599:255,0,255	0/1:219,262:778:255,0,255	0/1:336,354:959:255,0,255
+chr21	8439740	chr21:8439740:M	GGGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:4,4:8:86,0,86	0/1:3,3:7:69,0,58	0/0:4,0:5:0,12,112
+chr21	8443335	chr21:8443335:M	CCCCCGCCCCCCCCCCC	<16>	.	.	Motif=C	GT:AD:DP:PL	0/1:106,59:231:255,0,255	0/1:127,34:215:198,0,255	0/1:183,88:342:255,0,255
+chr21	8444477	chr21:8444477:M	CCCCCCCCCCCACCCC	<15>,<20>	.	.	Motif=C	GT:AD:DP:PL	1/2:20,56,31:153:255,255,255,255,0,255	0/2:79,32,53:215:255,255,255,0,255,255	1/2:21,39,88:211:255,255,255,255,0,255
+chr21	8446212	chr21:8446212:M	CGCGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:1560,268:2085:255,0,255	0/1:1181,564:1930:255,0,255	0/0:2660,329:3158:0,194,255
+chr21	8447163	chr21:8447163:M	TTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:16:255,7,0	0/1:2,12:56:255,0,17	1/1:0,40:70:255,169,0
+chr21	8447179	chr21:8447179:M	TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,30:30:255,86,0	1/1:0,40:47:255,104,0	1/1:0,8:14:112,19,0
+chr21	8447235	chr21:8447235:M	CGCTCTCGCTCTC	<1.7>,<2.3>	.	.	Motif=CGCTCT	GT:AD:DP:PL	1/2:0,3,2:5:90,24,39,71,0,66	.	1/2:0,8,4:12:237,49,79,200,0,191
+chr21	8447914	chr21:8447914:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:17,24:78:186,0,255	0/1:11,49:89:255,0,255	0/1:20,8:48:17,0,255
+chr21	8448628	chr21:8448628:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:26,28:107:255,0,255	0/1:22,29:173:255,0,255	0/0:33,0:209:0,198,255
+chr21	8449389	chr21:8449389:M	GGTGGGGTGGGGTG	<3.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	0/1:1,1:4:9,0,17	0/1:2,0:4:4,0,23	0/1:2,3:6:36,0,18
+chr21	8449536	chr21:8449536:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<16>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:32,27:96:255,0,255	0/1:36,31:104:255,0,255	0/0:164,16:209:0,255,255
+chr21	8449781	chr21:8449781:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:58,69:186:255,0,255	0/1:150,43:237:157,0,255	0/1:35,58:203:255,0,255
+chr21	8449827	chr21:8449827:M	TGTATCTATGTATGTATGTATGTATGT	<9.2>	.	.	Motif=TGTA	GT:AD:DP:PL	1/1:0,1:2:34,5,0	0/1:2,3:8:69,0,75	1/1:0,1:3:43,7,0
+chr21	8449996	chr21:8449996:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<11.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:196,131,278:795:255,255,255,184,0,255	1/2:87,234,167:728:255,255,255,255,0,255	0/2:375,52,253:1090:255,255,255,0,255,255
+chr21	8450684	chr21:8450684:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/1:0,19:35:255,73,0	1/1:0,17:37:255,68,0	1/1:4,32:49:255,8,0
+chr21	8451682	chr21:8451682:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<14>,<17>	.	.	Motif=TC	GT:AD:DP:PL	1/2:14,508,30:654:255,255,196,255,0,255	1/2:34,142,150:424:255,255,255,255,0,255	1/2:8,533,25:724:255,255,255,255,0,255
+chr21	8452385	chr21:8452385:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<6.8>,<8.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:53,67,6:223:255,0,255,255,255,255	1/2:79,62,172:468:255,255,255,255,0,255	0/2:102,29,120:358:255,255,255,0,255,255
+chr21	8452413	chr21:8452413:M	TTTCTTTTTCTTTTTCT	<1.8>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/0:810,10:820:0,255,255	0/1:787,353:1140:255,0,255	0/0:934,198:1133:0,49,255
+chr21	8453237	chr21:8453237:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<11.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:250,37:293:0,214,255	0/1:38,37:78:255,0,255	0/1:201,159:365:255,0,255
+chr21	8455277	chr21:8455277:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,104,65:172:255,255,255,255,0,255	1/2:0,100,61:172:255,255,255,255,0,255	1/2:0,129,73:208:255,255,255,255,0,255
+chr21	8465015	chr21:8465015:M	GTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,24,1:60:255,0,22,255,50,255	1/2:9,24,54:121:255,255,255,165,0,173	1/1:0,46,1:56:255,148,0,255,130,255
+chr21	8466840	chr21:8466840:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:66,37:129:255,0,255	0/1:33,13:97:246,0,255	0/1:96,66:201:255,0,255
+chr21	8470659	chr21:8470659:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:19,32:83:255,0,255	0/1:11,34:61:255,0,147	1/1:8,90:117:255,95,0
+chr21	8523526	chr21:8523526:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:23:130,0,119	0/1:22,10:32:69,0,255	0/0:40,1:59:0,153,255
+chr21	8527356	chr21:8527356:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,25:33:255,0,23	1/1:8,36:44:255,0,0	0/1:33,22:56:207,0,255
+chr21	8538019	chr21:8538019:M	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<11.8>	.	.	Motif=GAAG	GT:AD:DP:PL	0/0:3,0:4:0,0,39	0/1:5,3:10:25,0,57	0/0:13,1:17:0,11,192
+chr21	8539043	chr21:8539043:M	TGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:1,0:4:0,9,58	0/0:2,0:4:0,6,57	0/1:9,4:16:77,0,220
+chr21	8557646	chr21:8557646:M	TTTTTTTGTTTTGTTTTGTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:66,0,40	0/1:4,6:10:134,0,80	0/1:19,7:27:110,0,255
+chr21	8558574	chr21:8558574:M	GTGTGTGTCTGTGTGTGTGAGAGAGTGTGTGGTTTGTGTGT	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,4:23:2,0,235	0/1:19,7:27:36,0,228	0/0:34,5:39:0,32,255
+chr21	8558996	chr21:8558996:M	ATATATATATATATATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/0:28,0:30:0,87,255	0/1:20,7:27:36,0,250
+chr21	8580414	chr21:8580414:M	AGACAAGACAAGA	<1.6>	.	.	Motif=AGACA	GT:AD:DP:PL	0/1:17,5:22:73,0,255	0/0:29,1:30:0,62,255	0/1:29,11:40:179,0,255
+chr21	8582351	chr21:8582351:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:23:25,0,203	0/1:10,25:35:255,0,55	0/0:30,2:32:0,61,255
+chr21	8584854	chr21:8584854:M	GAAAGAAAGAAAGAAGGAAAGAAGGAAGGAAGGAAAAAAAAGAAAGAAAAGAAAGAAAGGAAAAGAAAAAAGAAAAGAAA	<19.8>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,2:3:20,6,0	1/1:0,3:4:21,7,0	0/0:2,0:2:0,4,14
+chr21	8584947	chr21:8584947:M	GAAGAAAGGAAGGAAGAAGGCAAGGGAAGGGAAGAGAAGAGAAAGGAAGATGGAAAGAAGGAAGGAAG	<12.5>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:7,3:10:46,0,142	0/0:10,0:10:0,30,250	0/0:19,1:20:0,36,255
+chr21	8590466	chr21:8590466:M	GGGGGGGGGGGGG	<11>,<12>	.	.	Motif=G	GT:AD:DP:PL	2/2:1,1,11:13:172,150,172,22,22,0	2/2:1,0,13:14:185,188,211,25,40,0	1/2:0,28,9:38:255,108,35,255,0,255
+chr21	8591042	chr21:8591042:M	TTCTTCCTCTTCCTTTCTCTTCTTCTT	<7.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:14,8:24:92,0,202	0/1:15,13:29:168,0,201	0/0:30,0:34:0,84,255
+chr21	8598361	chr21:8598361:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:0,9:11:123,0,0	0/1:4,11:21:161,0,65	0/1:16,5:23:21,0,227
+chr21	8600957	chr21:8600957:M	ATATACATATTGCAATATACATATA	<1.8>	.	.	Motif=ATATAC	GT:AD:DP:PL	0/0:14,1:15:0,18,255	0/1:23,4:27:26,0,255	0/1:18,7:25:108,0,255
+chr21	8618445	chr21:8618445:M	TATATATATAAAATATATATATATATATATA	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,12:13:167,22,0	0/1:1,0:2:6,0,9	0/1:6,5:11:43,0,58
+chr21	8643027	chr21:8643027:M	ATAGACAGATAGATAGATAGATAGATAGATAAGGTAGATAG	<11.2>	.	.	Motif=ATAG	GT:AD:DP:PL	.	.	1/1:0,6:8:110,18,0
+chr21	8651787	chr21:8651787:M	CCGCCGCGCCGCCGCTGTCCGCCTCTCCGCCGCGCCGCCGCTGTCCGCCTCTCCGCCGCGCCGCCGC	<5>	.	.	Motif=CCG	GT:AD:DP:PL	1/1:0,1:2:28,3,0	1/1:0,4:5:114,12,0	0/1:1,3:4:85,0,14
+chr21	8656862	chr21:8656862:M	GGCCGTGGCCGTGGCCCTGGCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGCCCTGCCCTGGCCCT	<7.7>	.	.	Motif=GGCCCT	GT:AD:DP:PL	0/1:1,3:4:74,0,14	0/1:1,5:6:126,0,8	0/0:1,0:1:0,3,23
+chr21	8658750	chr21:8658750:M	AGGGTCAGGGCCAGGG	<22.5>	.	.	Motif=AGGGCC	GT:AD:DP:PL	0/0:16,0:16:0,48,255	0/0:23,0:23:0,69,255	0/1:7,4:11:15,0,147
+chr21	8659331	chr21:8659331:M	GGGCCAGGGCCAAGGCAGGGCCAG	<22.5>	.	.	Motif=GGGCCA	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/0:26,1:27:0,69,255	0/1:5,4:9:21,0,109
+chr21	8660483	chr21:8660483:M	GCCCCGCCCTACCCTGGCCTTGCCCTGCCCTGGCCCTGCC	<4.8>	.	.	Motif=GCCCT	GT:AD:DP:PL	0/1:7,1:9:1,0,161	0/1:7,4:11:67,0,156	0/1:1,1:3:19,0,18
+chr21	8661284	chr21:8661284:M	ATTTTTATTTTTA	<22.5>	.	.	Motif=ATTTTT	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:35,0:35:0,105,255	0/1:9,21:30:164,0,167
+chr21	8661972	chr21:8661972:M	CATTTCATTTCAT	<27>	.	.	Motif=CATTT	GT:AD:DP:PL	0/1:7,4:11:16,0,164	0/1:5,2:7:3,0,119	1/1:11,169:180:255,189,0
+chr21	8662029	chr21:8662029:M	TGAGATGAGATGAAATGACAAAATGATGAGATGAGATGAGATGATGAGATGA	<27>	.	.	Motif=TGAGA	GT:AD:DP:PL	0/1:4,2:6:7,0,89	0/1:1,3:4:25,0,15	0/1:1,7:8:62,0,4
+chr21	8662161	chr21:8662161:M	GAGATGAGATGAGTTAAAATGAGATGAAATGATGAGATGA	<3.8>,<27>	.	.	Motif=GAGAT	GT:AD:DP:PL	0/0:11,0,2:13:0,33,255,12,255,255	0/2:9,0,3:12:5,32,252,0,220,212	1/2:3,4,7:14:159,1,63,93,0,147
+chr21	8664794	chr21:8664794:M	GATGAGATGAGATTTGATGAAATGATGAGATGAAATGATGAGATGATATGAAATGATGAGATGAGATGGGATAAGATGAAATGA	<27>	.	.	Motif=GATGA	GT:AD:DP:PL	.	.	1/1:0,3:3:36,8,0
+chr21	8671550	chr21:8671550:M	CCCCACCCCAC	<2.4>	.	.	Motif=CCCCA	GT:AD:DP:PL	0/0:16,3:19:0,19,136	0/0:18,4:22:0,16,146	0/1:20,9:29:17,0,133
+chr21	8674134	chr21:8674134:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:80,9,0	1/1:0,6:6:158,18,0	0/1:10,2:14:13,0,247
+chr21	8681520	chr21:8681520:M	GGAAGGAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGGAAGGAAGGAAG	<14.2>	.	.	Motif=GGAA	GT:AD:DP:PL	0/1:2,0:3:6,0,34	0/1:1,0:3:20,0,12	0/1:12,12:26:190,0,182
+chr21	8682753	chr21:8682753:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,1,3	0/0:1,0:2:0,6,46	1/1:0,3:3:80,9,0
+chr21	8684339	chr21:8684339:M	TGTGCGTGTGTGTGTGGGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG	<13.5>	.	.	Motif=TGTG	GT:AD:DP:PL	0/1:6,4:11:59,0,109	0/1:7,3:11:53,0,126	0/1:12,5:19:92,0,218
+chr21	8684707	chr21:8684707:M	AAAATAAAATAAAA	<1.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:77,6:83:0,156,255	0/1:73,27:100:37,0,255	0/0:107,18:125:0,131,255
+chr21	8685216	chr21:8685216:M	GACAAAGACAAA	<2.2>	.	.	Motif=GACAAA	GT:AD:DP:PL	1/1:0,3:5:69,14,0	1/1:0,9:10:149,29,0	0/1:18,5:23:10,0,211
+chr21	8686014	chr21:8686014:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAA	<29>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:64,40,36,28,0,90	1/2:0,3,1:8:68,42,32,36,0,85	1/2:1,5,9:21:235,206,217,27,0,132
+chr21	8690190	chr21:8690190:M	AAAAAAAAAAAAAAAAAGAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,16,9:29:255,37,54,127,0,92	1/2:5,14,10:31:255,23,78,92,0,74	0/2:11,5,10:28:87,23,205,0,61,51
+chr21	8690516	chr21:8690516:M	TTTTTTCTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,3,22:29:255,196,224,46,31,0	1/2:3,12,13:34:235,33,125,51,0,49	0/2:12,3,32:54:255,239,255,0,146,51
+chr21	8690764	chr21:8690764:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10:20:219,0,151	0/1:6,8:18:165,0,150	0/1:18,5:28:61,0,255
+chr21	8691722	chr21:8691722:M	TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATATA	<21>,<25>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,3:4:128,101,96,12,9,0	.	1/1:0,4,0:5:157,12,0,149,12,144
+chr21	8695282	chr21:8695282:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,26,28:59:255,255,158,255,0,112	1/2:5,28,16:64:255,76,151,178,0,124	0/2:12,12,26:64:255,125,255,0,102,88
+chr21	8699297	chr21:8699297:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20:44:238,0,255	0/1:29,20:49:203,0,255	0/1:35,16:55:146,0,255
+chr21	8699702	chr21:8699702:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,13:29:70,146,255,0,123,82	0/2:6,2,4:14:15,21,92,0,20,51	0/1:34,13,4:51:2,0,255,94,231,255
+chr21	8700053	chr21:8700053:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,38:68:255,0,255	0/1:18,16:47:255,0,255	0/1:44,43:107:255,0,255
+chr21	8702753	chr21:8702753:M	TATATACATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:47,19:66:170,0,255	0/1:56,12:68:17,0,255	0/1:72,21:93:117,0,255
+chr21	8703149	chr21:8703149:M	TGTGTGTGTGTGTGTGTGTG	<8>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,62:79:255,0,110	0/1:23,49:78:255,0,255	0/1:40,55:100:255,0,255
+chr21	8703177	chr21:8703177:M	TATGTATGTGTGTGTGTGTGTATATATATATGTAT	<1.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:44,20:64:255,0,255	0/1:47,12:63:209,0,255	0/1:71,14:89:192,0,255
+chr21	8758717	chr21:8758717:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:44,11:56:97,0,255	0/1:27,14:50:204,0,255	0/1:38,9:51:86,0,255
+chr21	8777201	chr21:8777201:M	TTTTATTTTTAATTTTTTTTTTCTTTT	<4.3>	.	.	Motif=TTTTAT	GT:AD:DP:PL	1/1:6,47:53:255,63,0	1/1:0,34:34:255,98,0	1/1:11,54:65:255,23,0
+chr21	8782166	chr21:8782166:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	1/1:11,38:51:255,15,0	1/1:3,22:25:182,35,0	1/1:6,53:67:255,99,0
+chr21	8782187	chr21:8782187:M	TCTCTCTCTCTCTCT	<9.5>,<10.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,4,3:7:130,30,10,38,0,19	1/2:0,3,3:7:128,38,18,29,0,10	0/1:2,6,3:11:122,0,4,25,3,46
+chr21	8782201	chr21:8782201:M	TATATATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:21,18:39:79,0,108	0/1:6,9:15:50,0,20	0/1:26,28:58:168,0,106
+chr21	8784747	chr21:8784747:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,18:73:145,0,159	0/1:2,12:31:126,0,1	0/1:11,18:65:170,0,100
+chr21	8786414	chr21:8786414:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,26:74:239,0,255	0/1:26,25:51:255,0,255	0/1:50,24:74:196,0,255
+chr21	8788021	chr21:8788021:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT	<20>,<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,17,10:41:49,0,88,64,8,213	1/2:3,5,7:19:48,32,71,31,0,69	0/1:10,21,7:43:105,0,37,145,17,255
+chr21	8788743	chr21:8788743:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,15:51:99,0,138	0/1:11,13:35:128,0,28	0/1:38,11:60:45,0,231
+chr21	8806868	chr21:8806868:M	GTGTGTGTGTGCGCGCGTGTGTGTGTGTGTGTGTGTTTGTGTGTGCGGTGTGTGTTTGTGTGTGTG	<22.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,3:12:35,0,186	0/0:13,1:14:0,16,255	0/0:9,1:10:0,7,200
+chr21	8812136	chr21:8812136:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,70:96:255,0,37	0/1:15,38:55:255,0,33	0/1:34,81:116:255,0,103
+chr21	8812543	chr21:8812543:M	TTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,7:28:156,0,255	0/1:13,2:20:34,0,255	0/1:32,4:55:54,0,255
+chr21	8813848	chr21:8813848:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:7:105,0,6	1/1:0,0:1:9,2,0	0/1:0,1:4:23,0,7
+chr21	8814065	chr21:8814065:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,7:43:29,0,95	0/1:7,8:26:39,0,35	0/1:26,14:51:27,0,125
+chr21	8814500	chr21:8814500:M	TTTCTTTTTTTTCTTTT	<3.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/0:25,7:32:0,15,171	0/1:14,6:20:6,0,82	0/0:38,9:47:0,34,255
+chr21	8815123	chr21:8815123:M	TTTTTTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,1:12:56,22,183,0,160,157	1/2:0,3,3:6:158,31,13,31,0,13	0/1:8,4,1:13:92,0,186,29,189,215
+chr21	8816400	chr21:8816400:M	AGGGTTAGGGTTAGGGGTTAGGGTTAGGGTCAGGGGTTAGTGGTCAGGTTCAGGGGTTAGGGATCAGGGTCAGGGGTTAGGGATCAGGGTCAGGTTCAGGG	<12.5>	.	.	Motif=AGGGTC	GT:AD:DP:PL	1/1:0,4:4:106,12,0	0/0:0,0:2:0,0,0	1/1:0,2:2:53,6,0
+chr21	8817239	chr21:8817239:M	TTCTTTTCTTTCTTGTTTTTTTTTTTTTTTC	<5.8>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:13,20:36:168,0,54	0/1:9,25:35:209,0,10	1/1:9,24:40:241,0,0
+chr21	8824095	chr21:8824095:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,3:19:0,13,175	0/1:10,5:15:24,0,91	0/0:29,5:34:0,29,255
+chr21	8828774	chr21:8828774:M	AAAAAAAAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,8:12:189,0,27	0/1:2,11:15:255,0,31	0/1:2,20:26:255,0,6
+chr21	8829420	chr21:8829420:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6:28:7,0,147	0/1:14,12:31:55,0,121	0/1:33,12:50:4,0,255
+chr21	8831799	chr21:8831799:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,14:23:134,0,44	0/1:5,18:26:176,0,15	0/1:18,11:31:60,0,177
+chr21	8836653	chr21:8836653:M	AAAAAAAAAAAAAAAAAAAAGAAAA	<21>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,6,1:29:138,0,255,178,122,255	0/2:6,1,4:15:1,11,224,0,42,39	0/1:9,9,1:25:231,0,183,253,69,255
+chr21	8847278	chr21:8847278:M	TTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,9:28:146,0,255	0/1:18,5:36:89,0,255	0/1:21,2:43:3,0,255
+chr21	8877314	chr21:8877314:M	TTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,6,1:22:87,0,118,94,72,228	0/2:2,0,5:9:88,100,158,0,26,15	0/2:7,0,4:15:39,75,236,0,120,130
+chr21	8988039	chr21:8988039:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:20,12:36:215,0,255	0/1:99,22:123:152,0,255	0/1:34,16:54:224,0,255
+chr21	8990385	chr21:8990385:M	GTCTGTCTGTCTGTCT	<4.5>,<5.5>	.	.	Motif=GTCT	GT:AD:DP:PL	1/2:16,53,26:95:255,45,7,251,0,255	1/2:0,53,29:96:255,255,29,255,0,255	0/2:30,29,32:91:255,49,224,0,149,255
+chr21	8990441	chr21:8990441:M	CACACCACACACACACACACACAGACACTCTCACACTCACACACAC	<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:17,71:136:255,72,0	1/1:0,88:107:255,255,0	0/1:27,40:112:255,0,162
+chr21	8993629	chr21:8993629:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:16,81,83:180:255,255,255,255,0,255	1/2:1,107,79:188:255,255,255,255,0,255	1/2:39,80,73:194:255,255,197,213,0,255
+chr21	8995570	chr21:8995570:M	ATATATATATATATATATATATATATATATATATATATATATAT	<4>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,57:91:255,175,0	1/1:0,80:96:255,227,0	1/1:0,79:101:255,170,0
+chr21	8995801	chr21:8995801:M	ATGGATATGGAT	<2.2>	.	.	Motif=ATGGAT	GT:AD:DP:PL	0/0:38,8:46:0,38,255	0/0:24,8:33:0,3,177	0/1:46,23:70:56,0,255
+chr21	8996039	chr21:8996039:M	AAAAAAAAAAAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:81,9,0	1/1:0,2:4:78,9,0	0/1:0,8:16:218,0,22
+chr21	8996071	chr21:8996071:M	GAAGGAAGGAAGGAAGGAAGGA	<6.5>,<9.5>,<10.5>	.	.	Motif=GAAG	GT:AD:DP:PL	1/3:0,3,0,8:14:208,179,166,96,62,106,37,0,69,66	2/3:0,0,9,5:18:255,255,255,37,20,0,74,52,0,51	1/3:0,14,0,18:36:255,255,255,250,133,255,123,0,255,255
+chr21	8997980	chr21:8997980:M	TATATATATATTCATATATACATATGCATATATATGTATAATATACATATATACATGCATACACATATATAATATACATATATATA	<30.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,8:40:167,0,192	0/1:2,8:22:186,0,24	0/1:11,4:35:64,0,251
+chr21	9002075	chr21:9002075:M	GTGGGGTGGGG	<1.8>	.	.	Motif=GTGGG	GT:AD:DP:PL	0/1:93,57:150:255,0,255	0/1:94,39:133:255,0,255	0/1:161,31:192:18,0,255
+chr21	9021106	chr21:9021106:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTGTGTGTTTGTGTGTGTGTG	<24>,<26>,<30>,<32>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,6,0,5,3:18:255,198,177,255,162,229,177,0,85,145,239,61,124,130,215	1/2:0,11,5,1,0:18:255,80,30,176,0,128,255,53,150,255,255,68,165,255,255	2/4:0,2,5,1,14:28:255,255,255,255,255,255,255,255,193,255,220,107,0,162,174
+chr21	9022114	chr21:9022114:M	TATATATATACACTTTATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,11:45:90,0,51	0/0:9,3:14:0,3,49	0/1:16,26:59:179,0,26
+chr21	9022146	chr21:9022146:M	TCTCTCTCTCTCTCTCTCTATCTCTCTCT	<13.5>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:5,15,9:40:170,32,4,158,0,255	1/2:1,1,7:12:64,54,56,8,0,85	1/1:4,26,9:65:255,52,0,255,63,255
+chr21	9025188	chr21:9025188:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,8:59:0,49,255	0/0:46,9:68:0,68,255	0/1:26,21:61:76,0,216
+chr21	9027842	chr21:9027842:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:37:255,58,0	1/1:0,23:38:255,83,0	1/1:0,41:55:255,127,0
+chr21	9028014	chr21:9028014:M	TTGTTTTTTTTTGTTTGTTTGTTT	<5.8>,<7.2>	.	.	Motif=TTGT	GT:AD:DP:PL	1/2:0,12,3:19:107,62,47,76,0,230	2/2:0,0,6:8:133,145,166,23,24,0	1/2:4,21,8:35:176,109,109,108,0,255
+chr21	9038074	chr21:9038074:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:206,22,0	1/1:0,1:1:17,3,0	1/1:1,15:19:255,37,0
+chr21	9038270	chr21:9038270:M	TTTTTTTTTTTTTT	<10>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:7,34,20:73:255,29,255,255,0,255	0/1:7,37,16:72:255,0,255,255,3,255	0/1:30,32,9:97:255,0,255,255,255,255
+chr21	9038689	chr21:9038689:M	TTTTTTTTTTTTT	<10>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3,5:21:26,0,255,15,51,87	1/2:1,5,4:12:124,31,107,96,0,100	0/1:29,8,2:40:91,0,255,158,255,255
+chr21	9038885	chr21:9038885:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:164,27,0	0/1:1,0:2:5,0,12	1/1:1,15:16:249,29,0
+chr21	9039487	chr21:9039487:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,18:41:255,0,255	1/1:0,31:45:255,92,0	0/1:27,32:68:255,0,255
+chr21	9040283	chr21:9040283:M	TTTTTTTTTTTTTCTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,16:44:255,126,47,255,0,151	1/1:0,17,0:25:255,66,0,255,59,219	1/2:0,38,26:67:255,202,84,255,0,218
+chr21	9041099	chr21:9041099:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:28:71,0,230	1/1:0,7:11:125,11,0	0/1:21,19:43:228,0,255
+chr21	9041504	chr21:9041504:M	ATATATATATATATATATATATAT	<7.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:9,1,4:20:57,37,255,0,161,138	0/2:6,1,3:12:49,24,172,0,109,96	0/1:13,9,1:29:158,0,255,92,226,255
+chr21	9041527	chr21:9041527:M	TTTTTTTTTTTTTTTT	<11>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,8,2:14:168,0,62,140,38,210	1/2:0,4,3:9:165,80,71,89,0,74	1/1:0,23,0:24:255,56,0,255,69,255
+chr21	9042403	chr21:9042403:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,49:82:255,0,129	0/1:56,31:98:99,0,255	0/1:55,44:109:210,0,255
+chr21	9042798	chr21:9042798:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,20:36:187,0,64	0/1:15,17:32:123,0,98	0/1:10,29:41:253,0,34
+chr21	9044096	chr21:9044096:M	AGGGTTAGGGTTAGGGGTTAGGGTTAGGGTCAGGGGTTAGGGGTCAGGGGTTAGGGGTCAGGGTCAGGGGTCAGGGTCAGGTTCAGGG	<5.8>	.	.	Motif=AGGGTC	GT:AD:DP:PL	1/1:0,21:22:255,65,0	1/1:0,18:19:255,54,0	1/1:1,22:23:255,47,0
+chr21	9045179	chr21:9045179:M	TTGTTGTTGTTGTTGTT	<6.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:46,21:67:53,0,255	0/1:23,14:38:51,0,160	0/0:46,10:59:0,41,255
+chr21	9053749	chr21:9053749:M	ACACACACACACACACACACACACATACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:21,4:27:0,7,248	0/1:6,7:14:70,0,45	0/1:31,8:49:66,0,255
+chr21	9057942	chr21:9057942:M	AAAAAAAGAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,2:11:0,8,72	0/0:17,2:19:0,29,152	0/1:25,10:35:11,0,165
+chr21	9072878	chr21:9072878:M	GGAGGAGGAGAGGAG	<4>	.	.	Motif=GGA	GT:AD:DP:PL	0/1:24,10:34:80,0,255	0/1:4,7:11:87,0,36	0/1:36,14:50:100,0,255
+chr21	9078248	chr21:9078248:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:13,21,18:52:255,22,233,102,0,125	1/2:0,15,20:35:255,198,153,187,0,91	0/1:24,56,5:86:255,0,255,255,235,255
+chr21	9084568	chr21:9084568:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTG	<20.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:21,1,0:29:64,0,255,128,246,255	1/2:1,3,3:8:85,24,72,67,0,84	0/1:11,3,1:17:53,0,218,80,116,190
+chr21	9088788	chr21:9088788:M	TATGTATGTATGTAT	<1.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:8,0:8:0,24,222	.	0/1:2,4:6:91,0,37
+chr21	9088851	chr21:9088851:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:33:168,0,183	0/1:4,13:17:156,0,14	0/1:12,21:33:244,0,98
+chr21	9105777	chr21:9105777:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,62,0	.	1/1:1,15:16:246,29,0
+chr21	9106908	chr21:9106908:M	ACACACACACACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,11:48:160,0,255	0/1:10,15:39:212,0,207	0/1:23,7:43:93,0,255
+chr21	9107926	chr21:9107926:M	TATATATATAT	<3.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:26,1:27:0,59,255	0/1:6,3:9:38,0,102	0/0:44,2:47:0,96,255
+chr21	9110203	chr21:9110203:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:22:0,15,104	1/1:0,4:13:55,15,0	0/0:14,2:29:0,41,203
+chr21	9115662	chr21:9115662:M	AAAAAAAAAAAGAAAAGAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,18:36:227,0,216	1/1:0,18:18:255,53,0	0/1:20,26:47:255,0,238
+chr21	9117865	chr21:9117865:M	AAAAAAAAAAAAATAAAAATAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,12:37:214,0,255	0/1:7,19:27:255,0,122	0/1:41,19:61:255,0,255
+chr21	9121382	chr21:9121382:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:14:13,0,255	1/1:0,5:5:136,15,0	0/1:12,4:17:57,0,255
+chr21	9121528	chr21:9121528:M	AAAAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5,11:31:54,0,255,0,15,59	0/2:3,2,6:17:32,20,203,0,11,23	0/1:18,19,7:47:255,0,255,255,107,255
+chr21	9121942	chr21:9121942:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,18:51:82,0,255	0/1:5,19:27:156,0,18	0/1:36,27:68:155,0,255
+chr21	9124831	chr21:9124831:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:21:65,0,54	1/1:2,7:9:54,2,0	0/0:16,5:21:0,1,121
+chr21	9133336	chr21:9133336:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:5,0,100	0/0:6,0:6:0,16,72	0/0:5,0:8:0,18,77
+chr21	9134281	chr21:9134281:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,25:38:255,0,106	0/1:8,18:26:222,0,56	0/1:31,18:49:162,0,255
+chr21	9134732	chr21:9134732:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:53,20:76:34,0,255	0/1:44,18:65:38,0,255	0/1:72,30:103:77,0,255
+chr21	9134891	chr21:9134891:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,3:25:3,0,255	0/1:4,5:9:102,0,77	0/1:19,9:28:149,0,255
+chr21	9144154	chr21:9144154:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,7,17:42:73,88,255,0,45,142	1/2:1,4,7:12:73,62,108,31,0,48	0/2:18,6,11:35:25,53,255,0,87,159
+chr21	9148728	chr21:9148728:M	AAAAAGAAAAAGGAAAAAAAAAG	<3.7>	.	.	Motif=AAAAAG	GT:AD:DP:PL	0/1:11,20:31:187,0,64	0/1:7,3:10:13,0,68	0/1:11,13:24:111,0,83
+chr21	9149056	chr21:9149056:M	TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTATGTGTGTG	<19>	.	.	Motif=TG	GT:AD:DP:PL	0/0:37,0:39:0,84,255	1/1:1,9:13:105,20,0	0/0:25,4:31:0,26,231
+chr21	9151857	chr21:9151857:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,14:16:135,21,0	1/1:0,0:1:10,3,0	0/1:4,6:12:52,0,13
+chr21	9166200	chr21:9166200:M	TTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,7:15:151,0,159	1/1:0,6:8:153,7,0	0/1:12,4:21:49,0,255
+chr21	9181896	chr21:9181896:M	GTGTGTGTGTATGTGTGTTTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<27>	.	.	Motif=GT	GT:AD:DP:PL	0/1:30,26:61:76,0,141	0/0:19,8:34:0,14,146	0/1:29,16:51:25,0,151
+chr21	9192914	chr21:9192914:M	AAAAAAAAGGAAAAAAGAAAAAGAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,6:19:112,0,255	0/1:6,4:10:83,0,118	0/1:35,5:41:17,0,255
+chr21	9193067	chr21:9193067:M	TCTCTCTCTCTCTCTCT	<7.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:41,2:44:0,86,255	0/1:16,8:27:34,0,134	0/0:73,3:79:0,165,255
+chr21	9246106	chr21:9246106:M	GAATGGAATGGAATGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	1/1:43,549:592:255,255,0	1/1:65,608:673:255,118,0	0/1:68,558:626:255,0,83
+chr21	9246379	chr21:9246379:M	GGAATGGAATGGAAT	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:165,576:759:255,0,255	0/1:176,629:822:255,0,255	0/1:141,588:755:255,0,255
+chr21	9246463	chr21:9246463:M	GAATGGAATTGAATAGAGTGGAATGAAATGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	0/1:135,587:725:255,0,255	0/1:135,645:789:255,0,255	0/1:118,601:727:255,0,255
+chr21	9247746	chr21:9247746:M	AGTGGAGTGGGATGGAGTG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	0/1:252,125:377:255,0,255	0/1:260,148:408:255,0,255	0/1:250,150:400:255,0,255
+chr21	9247991	chr21:9247991:M	GGAATGGAATTGAATGGAGGGGAATGGAATGGGATGGA	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:256,367:639:255,0,255	0/1:213,377:612:255,0,255	0/1:213,374:600:255,0,255
+chr21	9248680	chr21:9248680:M	GGAATGGAACGGATTAGAGTGGAATGGAATGGA	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:89,266:356:255,0,255	0/1:109,277:386:255,0,255	0/1:96,259:355:255,0,255
+chr21	9254015	chr21:9254015:M	TTTGTGTGTGTGTTTGTTTTTTTTTGT	<7.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:1,37:41:255,95,0	0/0:15,0:16:0,44,255	1/1:0,25:32:255,75,0
+chr21	9254039	chr21:9254039:M	TGTGTGTGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,3:9:8,0,142	0/0:24,0:24:0,72,255	0/0:10,2:13:0,14,255
+chr21	9281359	chr21:9281359:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,15:27:255,0,75	0/1:10,7:25:110,0,161	0/1:13,14:45:255,0,180
+chr21	9293315	chr21:9293315:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAA	<8.5>,<11.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,12,5:17:255,63,84,255,0,255	0/1:8,3,1:12:33,0,164,50,85,132	0/1:10,4,0:15:51,0,192,85,123,192
+chr21	9305750	chr21:9305750:M	CACACACACACACACACACACACACACACACACACACAC	<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,21:69:103,0,6	0/1:27,9:74:21,0,98	0/1:12,17:98:38,0,111
+chr21	9306079	chr21:9306079:M	TATATATATATATATATATATATTTATATTTATATTTATATATTTATATTTATATTT	<9.2>,<10.2>	.	.	Motif=TATATT	GT:AD:DP:PL	1/2:1,7,4:15:68,38,34,48,0,106	0/2:0,0,1:2:8,11,17,0,4,2	1/1:3,15,0:19:78,19,0,127,53,255
+chr21	9317326	chr21:9317326:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:51,17:68:77,0,255	0/1:53,17:73:58,0,255	0/0:83,7:90:0,150,255
+chr21	9321493	chr21:9321493:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:11:154,15,0	0/1:22,6:28:17,0,255	1/1:1,20:22:255,38,0
+chr21	9324658	chr21:9324658:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<34>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:80,18,9,57,0,50	1/2:1,2,3:7:84,33,46,31,0,37	1/1:0,6,0:6:143,18,0,132,18,124
+chr21	9332490	chr21:9332490:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:67,10:78:0,87,255	0/1:63,22:86:45,0,255	0/0:111,1:122:0,255,255
+chr21	9333366	chr21:9333366:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:58,61:124:255,0,253	0/1:101,39:145:16,0,255	0/1:49,53:110:255,0,193
+chr21	9345622	chr21:9345622:M	TTTTCATTTTTTTTCCTTTTCTTTTCTTTTCTTTTTTTTTACTTT	<8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:67,37:105:255,0,255	0/1:73,65:141:255,0,255	0/1:104,44:150:255,0,255
+chr21	9352683	chr21:9352683:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:15:130,0,110	0/1:3,7:16:160,0,75	0/0:3,0:4:0,2,72
+chr21	9354167	chr21:9354167:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,15:38:255,0,122	0/1:20,14:43:255,0,255	0/1:15,14:38:255,0,255
+chr21	9355327	chr21:9355327:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:44,87:143:255,0,146	0/1:61,96:165:255,0,255	0/1:108,26:148:47,0,255
+chr21	9356028	chr21:9356028:M	TCTCTCTCTCTCTCTCTCTCT	<12.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:15,1:19:0,31,255	0/0:31,0:47:0,121,255	0/1:27,16:53:146,0,255
+chr21	9357476	chr21:9357476:M	AAAAAAAAAGAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:182,53:250:0,22,255	0/0:182,29:239:0,103,255	0/1:147,61:228:147,0,255
+chr21	9357529	chr21:9357529:M	TTTTTTGTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:100,87:232:255,0,255	0/1:133,54:224:106,0,255	0/1:85,56:187:201,0,255
+chr21	9373555	chr21:9373555:M	AAAAAAAAGAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,11:40:176,0,255	0/0:72,0:73:0,216,255	0/1:13,26:42:255,0,229
+chr21	9376219	chr21:9376219:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16.5>,<17.5>,<18.5>	.	.	Motif=TC	GT:AD:DP:PL	0/3:3,1,2,10:20:255,183,167,81,96,89,0,17,35,43	2/3:1,0,5,4:13:116,72,65,10,21,7,15,20,0,23	1/3:6,8,0,2:20:64,13,21,22,27,95,4,0,104,176
+chr21	9376249	chr21:9376249:M	TATATATATATATATATATATATATATA	<12.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,8,10:27:242,134,128,98,0,44	1/2:0,4,2:10:98,23,7,63,0,47	2/2:0,0,13:39:255,255,255,77,95,0
+chr21	9527280	chr21:9527280:M	TTTTTTTTTTTTTT	<12>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9,6:25:120,0,235,114,42,219	0/1:15,5,1:22:58,0,255,100,149,245	1/2:10,9,16:35:159,69,255,70,0,151
+chr21	9527753	chr21:9527753:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,21:26:255,13,0	0/1:10,27:39:255,0,48	0/1:8,15:24:159,0,63
+chr21	9536364	chr21:9536364:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:42,9:54:47,0,255	0/0:61,0:63:0,182,255	0/1:30,23:57:255,0,255
+chr21	9538526	chr21:9538526:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,2:30:0,55,255	0/1:13,9:22:77,0,140	0/0:19,3:23:0,19,255
+chr21	9538915	chr21:9538915:M	TTTTTTATTTCTTTCTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTT	<54>,<56>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,0,5:14:29,70,255,0,125,84	1/2:1,3,5:9:109,52,111,54,0,46	2/2:4,0,13:20:154,177,255,1,50,0
+chr21	9541066	chr21:9541066:M	TGTGTGTGTGTGAGTGTGCGTATGTGTGTGCGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,6:23:12,0,152	0/0:23,0:23:0,64,255	0/1:14,8:22:39,0,115
+chr21	9541916	chr21:9541916:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,5:29:0,24,196	0/0:22,2:25:0,45,213	0/1:12,13:28:89,0,50
+chr21	9544220	chr21:9544220:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,3,17:38:255,151,213,0,123,206	0/1:11,12,7:32:100,0,44,26,57,209	0/2:31,11,13:56:116,30,201,0,216,255
+chr21	9544541	chr21:9544541:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5:19:19,0,105	0/1:8,7:16:40,0,63	0/1:18,8:27:23,0,155
+chr21	9545072	chr21:9545072:M	GGGGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/1:25,11:43:5,0,174	0/0:12,0:20:0,49,173	0/1:21,22:51:100,0,109
+chr21	9546124	chr21:9546124:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,2,0:10:28,0,97,26,62,69	0/2:11,1,7:20:36,38,216,0,91,59	0/1:6,13,2:23:222,0,56,124,38,128
+chr21	9546599	chr21:9546599:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,4:18:9,0,163	0/0:9,0:11:0,31,154	0/1:17,6:23:24,0,191
+chr21	9547958	chr21:9547958:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:20:30,0,133	0/0:12,1:15:0,28,174	0/1:11,7:19:57,0,101
+chr21	9553153	chr21:9553153:M	TTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,13:20:255,0,77	0/1:0,7:11:163,0,5	0/1:5,4:12:80,0,121
+chr21	9554815	chr21:9554815:M	TTTTTTTTTTTGTTTTTTGTTTTTTTTT	<30>,<31>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,15:30:255,231,146,206,0,120	1/1:0,5,0:5:130,15,0,85,14,71	2/2:0,0,6:6:169,104,87,18,17,0
+chr21	9555114	chr21:9555114:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,20:28:182,0,1	0/1:9,9:18:60,0,60	0/1:4,2:8:24,0,28
+chr21	9568146	chr21:9568146:M	GATGATGATGATG	<5.3>	.	.	Motif=GAT	GT:AD:DP:PL	0/1:19,6:25:3,0,156	0/1:12,7:19:30,0,87	0/0:50,8:58:0,63,255
+chr21	9568474	chr21:9568474:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,13:55:0,9,255	0/0:50,11:61:0,47,255	0/1:32,23:56:91,0,193
+chr21	9576101	chr21:9576101:M	TTTATTTTATTT	<2.2>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/1:38,29:72:128,0,212	0/0:48,14:72:0,8,255	0/1:64,42:106:155,0,255
+chr21	9579077	chr21:9579077:M	TATATATATATATCATAT	<8>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:2,5,4:13:55,12,8,47,0,202	0/1:3,3,2:9:20,0,10,23,14,148	0/0:27,2,1:31:0,48,226,81,255,255
+chr21	9590868	chr21:9590868:M	CTTTTCCTTTTCTTTTTCTTTTTTTTTTTTTTTT	<6.4>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:6,0:6:0,16,61	0/0:2,0:5:0,6,22	1/1:0,6:6:61,16,0
+chr21	9592383	chr21:9592383:M	ACACACACACACACACACACTCACACAGAGACACACACACA	<17.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,9:20:78,122,255,0,134,78	0/0:13,0,3:16:0,47,255,6,177,131	1/2:0,7,21:28:255,255,255,166,0,93
+chr21	9592922	chr21:9592922:M	TTTTTTTTTTATTTTTTATTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:3:0,3,12	1/1:0,1:2:30,3,0	1/1:1,14:15:255,14,0
+chr21	9593108	chr21:9593108:M	TTTTATTTTACTTTTTTTTTTTATT	<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,11:11:97,27,0	1/1:2,16:18:123,27,0	0/0:18,5:23:0,13,114
+chr21	9604526	chr21:9604526:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:1,0,68	0/1:2,3:6:18,0,11	0/0:18,0:18:0,48,200
+chr21	9607114	chr21:9607114:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,1:10:0,16,93	0/1:7,3:11:5,0,60	0/0:25,6:31:0,15,219
+chr21	9610522	chr21:9610522:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:12:0,31,114	0/1:8,6:15:18,0,46	0/0:11,2:16:0,19,103
+chr21	9619746	chr21:9619746:M	TTATTATAATTATTAT	<4.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:30,9:39:57,0,255	0/1:24,11:35:95,0,255	0/0:36,0:36:0,106,255
+chr21	9626221	chr21:9626221:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:48,22:73:141,0,255	1/1:1,12:13:169,22,0	0/0:29,5:35:0,23,255
+chr21	9629089	chr21:9629089:M	ATATACATATATATATAGTATATAT	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:57,0:57:0,164,255	0/1:10,5:15:32,0,106	0/0:49,0:49:0,141,255
+chr21	9657308	chr21:9657308:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,5,0,1:9:102,34,60,78,58,86,85,0,46,123	1/3:0,6,0,6:15:186,116,178,166,171,200,101,0,54,134	2/3:0,1,3,0:6:54,41,42,30,24,23,37,18,0,83
+chr21	9662361	chr21:9662361:M	TTTTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:17,0,12:30:37,121,255,0,181,94	0/0:13,0,1:16:0,29,255,13,135,94	1/2:7,19,7:37:255,3,141,255,0,255
+chr21	9666845	chr21:9666845:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,0,21:36:255,255,255,0,214,113	1/2:1,21,10:36:255,151,200,255,0,255	0/2:21,0,16:50:143,255,255,0,255,255
+chr21	9680860	chr21:9680860:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:15,0:15:0,42,197	0/1:12,18:30:147,0,70	0/0:20,0:23:0,58,255
+chr21	9694961	chr21:9694961:M	ATATATATGTCTATATATATATATACATAT	<14>	.	.	Motif=AT	GT:AD:DP:PL	0/1:11,35:46:255,0,74	0/1:40,16:56:123,0,255	0/1:16,40:56:255,0,133
+chr21	9709049	chr21:9709049:M	GTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:0,0:1:0,0,0	1/1:1,16:17:208,34,0	1/1:0,4:5:70,14,0
+chr21	9709123	chr21:9709123:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:17,6:23:90,0,255	0/0:14,0:14:0,42,255	0/1:10,6:17:111,0,219
+chr21	9709864	chr21:9709864:M	AATAATAATAATAATAAT	<7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:31,0:31:0,88,255	0/0:4,0:5:0,1,42	0/1:11,5:17:22,0,120
+chr21	9709882	chr21:9709882:M	TATATATATATATATATATA	<4.5>,<9>,<11>	.	.	Motif=TA	GT:AD:DP:PL	0/3:10,0,0,15:26:82,159,255,139,255,255,0,114,70,39	2/3:0,0,6,4:11:75,106,255,43,88,60,54,113,0,82	0/1:6,11,0,0:19:255,0,123,255,50,255,255,64,255,255
+chr21	9709901	chr21:9709901:M	AGAGAGAGAGAGAGAGAGA	<11.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,10:34:162,0,242	0/0:15,0:16:0,44,255	0/1:12,5:24:68,0,203
+chr21	9712972	chr21:9712972:M	ACACACACACACACACACACACACACACAC	<13>,<14>,<16>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,3,0,11:16:151,114,255,154,234,242,64,0,41,57	0/2:20,0,9,5:34:10,84,255,0,255,186,45,255,119,255	1/3:2,9,0,14:25:255,136,255,231,255,255,164,0,96,183
+chr21	9722805	chr21:9722805:M	AACAACAACAACAACAACAACAA	<5.7>,<9.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/2:0,20,40:66:255,255,255,255,0,255	0/2:40,11,15:74:202,198,255,0,255,255	0/2:37,0,22:62:255,255,255,0,255,255
+chr21	9724209	chr21:9724209:M	ACACACACACACACACACACACACACACACACACACAC	<16>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,16,15:52:255,12,239,124,0,121	0/1:12,21,10:61:255,0,217,255,15,246	0/1:11,13,0:54:163,0,255,170,235,255
+chr21	9727768	chr21:9727768:M	AAAAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,25:35:255,255,255,76,95,0	0/2:9,13,8:46:111,95,209,0,13,255	0/2:14,1,11:41:205,255,255,0,161,255
+chr21	9742111	chr21:9742111:M	AAGTGAAGTGA	<2.4>	.	.	Motif=AAGTG	GT:AD:DP:PL	1/1:17,72:89:255,79,0	0/0:79,29:108:0,38,255	0/0:75,31:106:0,19,255
+chr21	9746229	chr21:9746229:M	TTTTTTTTTTTTTTTTTT	<16>,<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:7,7,25,8:48:171,103,255,6,65,16,218,152,0,255	2/3:5,2,11,8:27:79,76,245,27,110,70,76,76,0,164	1/2:5,14,28,1:50:255,123,172,69,0,7,255,215,104,255
+chr21	9746593	chr21:9746593:M	GTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,59:76:255,0,225	0/1:27,81:109:255,0,255	0/1:23,75:101:255,0,255
+chr21	9755719	chr21:9755719:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:52,30:84:204,0,255	0/1:23,41:65:255,0,138	0/1:24,40:82:255,0,255
+chr21	9761944	chr21:9761944:M	TGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,12,8:38:255,0,255,92,255,255	0/2:10,6,15:34:255,118,255,0,163,206	0/1:16,19,7:58:255,0,255,213,255,255
+chr21	9764569	chr21:9764569:M	CACACACACACACACACACACACACCACACACACA	<19.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:14,13,14:52:255,196,255,0,47,255	0/2:13,14,16:59:255,156,240,0,20,255	1/2:14,28,9:62:255,24,96,156,0,255
+chr21	9765079	chr21:9765079:M	TATATATATATATATATATATATATATATATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,34:58:255,0,141	1/1:0,20:23:255,58,0	0/1:0,18:31:255,0,2
+chr21	9775731	chr21:9775731:M	TTTCTTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<10.2>,<15.5>,<16.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,7,7,2:31:255,226,255,178,0,148,215,60,141,211	1/3:0,20,5,6:50:255,255,255,255,21,255,255,0,255,255	2/3:0,0,11,9:36:255,255,255,111,138,32,128,191,0,92
+chr21	9775782	chr21:9775782:M	TTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,6:55:8,0,255	0/1:38,9:49:111,0,255	0/1:47,29:78:255,0,255
+chr21	9785414	chr21:9785414:M	TTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3,0:6:57,50,120,0,71,59,49,70,26,61	2/3:2,0,2,3:9:55,64,172,12,87,64,18,35,0,14	1/3:1,4,2,3:16:164,39,124,75,45,106,117,0,59,109
+chr21	9791326	chr21:9791326:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,83:107:255,0,77	1/1:16,91:107:255,55,0	0/1:38,51:90:255,0,255
+chr21	9794599	chr21:9794599:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:12,27,14:54:255,1,97,144,0,119	1/2:9,19,30:58:255,126,202,89,0,26	1/1:7,40,0:49:255,20,0,255,61,255
+chr21	9794759	chr21:9794759:M	AAAAAAAAAATAAAAAAAAAAAAAA	<14>,<16>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,2,2,10:36:255,89,220,218,227,255,252,0,129,222	1/3:0,13,3,4:30:255,37,48,208,49,229,255,0,171,255	0/2:4,0,6,1:20:137,60,185,0,119,126,130,73,14,145
+chr21	9794783	chr21:9794783:M	ATATATATATATATATATATACATATATA	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,4:23:60,0,183	0/1:4,5:9:92,0,72	0/1:6,6:21:112,0,124
+chr21	9820677	chr21:9820677:M	ACACACACACAGACACACACACACACACACACACACACAC	<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	0/2:39,88,81:268:255,107,61,0,14,255	0/1:44,89,39:234:255,0,75,153,240,255	0/2:24,35,41:185:255,105,255,0,255,255
+chr21	9823502	chr21:9823502:M	AGACACACACACAGACACA	<2.8>	.	.	Motif=AGACAC	GT:AD:DP:PL	0/1:127,61:188:232,0,255	0/0:188,54:242:0,3,255	0/1:100,46:148:163,0,255
+chr21	9827726	chr21:9827726:M	ACACACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,22:43:92,0,24	0/0:23,10:42:0,20,152	1/1:6,17:33:125,17,0
+chr21	9833357	chr21:9833357:M	ACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,13:17:193,0,9	0/1:13,15:31:203,0,178	0/1:2,10:13:151,0,2
+chr21	9837570	chr21:9837570:M	ACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,2:15:50,0,246	0/1:9,6:15:142,0,193	0/1:12,7:19:149,0,255
+chr21	9838981	chr21:9838981:M	ACACAGACACACTCACACACACACACACACACACACACA	<18.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:20,8,12:40:99,121,255,0,104,255	0/2:31,1,7:43:8,87,255,0,252,255	1/2:16,16,12:49:105,51,173,21,0,255
+chr21	9851709	chr21:9851709:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,20:27:255,0,6	0/1:8,6:16:71,0,111	0/1:9,5:17:78,0,124
+chr21	9854366	chr21:9854366:M	TTTGTTTGTTTTTTTG	<5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:35,79:116:255,0,91	1/1:20,84:104:255,61,0	0/1:56,62:119:255,0,255
+chr21	9855936	chr21:9855936:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:53,36:90:223,0,255	0/1:65,19:84:11,0,255	0/1:36,54:90:255,0,219
+chr21	9858104	chr21:9858104:M	ATATATATATATATATATATATATATATATATATATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,31:37:255,109,0	1/1:0,21:22:255,66,0
+chr21	9873956	chr21:9873956:M	AAACAAACAAACAAACAAACAAACAAACAAAC	<7>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:14,91:106:255,119,0	1/1:17,95:112:255,102,0	1/1:20,105:126:255,101,0
+chr21	9874574	chr21:9874574:M	CACACACACACACACACACACACACACACACACACACACACACACACACACA	<19>,<21>,<23>,<24>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,8,7,4:19:255,255,255,128,161,110,116,96,0,63,198,138,19,78,151	3/4:0,0,0,8,9:19:255,255,255,236,255,255,73,64,59,23,81,64,50,0,29	0/1:3,7,4,0,0:18:214,0,83,43,55,125,177,79,133,243,208,56,101,231,247
+chr21	9878731	chr21:9878731:M	TTTTTTTCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,20,24:53:255,214,108,178,0,71	2/2:0,0,24:33:255,255,231,74,65,0	1/2:0,21,38:61:255,255,193,226,0,48
+chr21	9878921	chr21:9878921:M	TTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:16,30,7:64:255,93,187,161,0,255	1/2:0,32,28:65:255,255,255,255,0,255	0/1:40,36,2:78:179,0,237,255,255,255
+chr21	9884757	chr21:9884757:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,17:45:70,0,48	0/1:0,11:19:49,0,2	1/1:5,27:46:198,39,0
+chr21	9884923	chr21:9884923:M	AAAATAAAATAAAATAAA	<2.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:56,20:76:255,0,255	0/1:29,11:40:188,0,255	0/0:75,0:75:0,225,255
+chr21	9888581	chr21:9888581:M	TTTTTCTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,11:33:10,0,94	0/1:15,10:36:12,0,95	0/0:33,1:40:0,75,255
+chr21	9893417	chr21:9893417:M	ACACACACACACACACACACACACGCCACACAC	<14.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,29,15:89:255,0,236,255,53,255	1/2:18,29,25:85:197,22,255,218,0,255	1/1:1,28,0:98:255,159,0,255,153,255
+chr21	9894712	chr21:9894712:M	AAAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,39,15:74:255,0,255,229,180,255	1/1:9,69,3:82:255,2,0,255,102,255	1/2:0,63,47:110:255,255,166,255,0,255
+chr21	9907030	chr21:9907030:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,26:69:100,0,139	0/1:22,23:61:92,0,145	0/1:11,16:46:59,0,96
+chr21	9908432	chr21:9908432:M	ATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTA	<9>,<11>,<15>	.	.	Motif=ATCT	GT:AD:DP:PL	1/3:0,31,15,15:70:255,255,255,255,250,255,255,0,248,255	1/2:0,27,22,0:63:255,255,232,255,0,255,255,162,239,255	1/3:0,21,0,15:53:255,255,255,255,255,255,255,0,255,255
+chr21	9917528	chr21:9917528:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:5,37,9:52:255,37,38,255,0,255	1/2:1,25,17:44:255,146,203,231,0,255	0/1:20,22,2:46:121,0,101,219,139,255
+chr21	9923070	chr21:9923070:M	ACACACACACACACACACACACACA	<8.5>,<10.5>,<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:25,23,15,13:77:255,0,255,178,254,255,255,14,255,255	0/3:31,0,23,34:89:255,255,255,51,255,255,0,255,103,129	1/3:1,19,31,23:95:255,255,255,37,38,243,255,0,50,255
+chr21	9932468	chr21:9932468:M	AAAAAAACAAACAAACAAACAAAAAAAAACAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/1:65,16:81:123,0,255	0/1:62,13:75:68,0,255	0/1:33,53:86:255,0,255
+chr21	9939035	chr21:9939035:M	ATATATATGTTATTATATATGTTATATATATATATATAATATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:35,9:44:112,0,255	0/1:19,14:33:255,0,255	0/1:17,36:53:255,0,255
+chr21	9948821	chr21:9948821:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,5:50:0,21,255	0/0:42,0:58:0,130,255	0/1:36,14:52:208,0,255
+chr21	9949904	chr21:9949904:M	AAAATAAAATAAAA	<3.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:53,65:118:255,0,255	0/1:45,75:120:255,0,255	0/1:75,63:138:255,0,255
+chr21	9956781	chr21:9956781:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:42,23:85:177,0,255	0/1:20,27:61:255,0,113	0/1:62,47:115:255,0,255
+chr21	9963353	chr21:9963353:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:41,29:73:130,0,255	0/1:28,43:73:255,0,104	0/0:56,5:70:0,125,255
+chr21	9969989	chr21:9969989:M	TGTGTGCGTGTATGTGTGTGTGTGTGT	<12.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:37,16,18:90:255,255,255,0,222,255	1/2:20,31,19:78:255,228,255,128,0,255	0/2:33,1,34:69:255,255,255,0,255,255
+chr21	9984660	chr21:9984660:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,57:86:255,0,204	1/1:15,82:98:255,54,0	0/1:25,82:108:255,0,77
+chr21	9989193	chr21:9989193:M	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTGTCTCCCTCTCTCTCTCT	<26.5>,<27.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:8,11,3:26:173,0,98,91,51,113	1/2:0,11,10:25:255,79,41,127,0,69	0/0:10,0,1:18:0,30,195,19,119,91
+chr21	9992425	chr21:9992425:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:33,17:55:74,0,247	0/1:31,11:45:20,0,235	0/1:37,16:59:23,0,255
+chr21	9994453	chr21:9994453:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3,4:25:101,0,184,19,112,115	1/2:2,13,6:36:255,31,3,152,0,102	1/2:1,9,5:20:255,31,22,72,0,39
+chr21	9997462	chr21:9997462:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,0:1:0,0,0	1/1:0,3:3:38,8,0
+chr21	10001908	chr21:10001908:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,30,27:58:255,225,154,255,0,177	1/1:2,42,12:57:255,92,0,255,1,255	1/2:0,33,19:54:255,169,64,255,0,239
+chr21	10003301	chr21:10003301:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:55,19:74:133,0,255	0/1:56,28:85:241,0,255	0/1:31,51:84:255,0,255
+chr21	10004043	chr21:10004043:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:55,32,2:91:255,0,255,255,255,255	0/1:37,39,4:85:255,0,255,255,255,255	1/2:13,40,23:78:255,69,195,255,0,255
+chr21	10018178	chr21:10018178:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,14:41:54,0,170	0/1:30,16:49:44,0,213	0/1:25,15:44:46,0,193
+chr21	10021513	chr21:10021513:M	AAATAAATAAATAAATAAATAAATAAATGAAAT	<10.2>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:57,5:64:0,66,255	0/1:38,13:51:164,0,255	0/0:55,0:66:0,165,255
+chr21	10023756	chr21:10023756:M	AAAAAAAACAAAACAA	<3>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:34,9:43:0,25,230	0/1:13,12:25:48,0,57	0/0:49,7:57:0,79,255
+chr21	10028361	chr21:10028361:M	TTTTTTTTTTTTTTT	<16>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:30,15,14,5:65:213,57,203,0,181,255,126,255,255,255	1/3:12,14,9,15:53:255,219,212,92,94,212,39,0,168,255	0/2:31,18,22,3:77:255,93,235,0,183,255,230,255,255,255
+chr21	10034590	chr21:10034590:M	AAAAGAAAAAAAAAAAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:39,10:50:42,0,255	0/1:17,18:35:205,0,188	0/0:47,1:48:0,123,255
+chr21	10039657	chr21:10039657:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:19,4,4:27:30,7,183,0,204,255	1/2:0,8,3:11:145,38,8,82,0,73	0/1:21,13,0:34:75,0,180,138,255,255
+chr21	10044280	chr21:10044280:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,7,9:26:142,36,80,0,46,158	1/1:3,26,5:35:255,53,0,221,36,255	0/1:9,16,7:33:167,0,19,63,26,215
+chr21	10052192	chr21:10052192:M	TATATATATATACGCATATATATATACACATATATATA	<4>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,7:31:118,0,255	0/1:17,6:24:77,0,255	0/0:15,1:18:0,4,255
+chr21	10069359	chr21:10069359:M	ACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:30,12:46:158,0,255	0/1:15,12:31:193,0,255	0/0:47,0:48:0,140,255
+chr21	10079378	chr21:10079378:M	GAGAGAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:76,13:89:0,13,255	0/1:57,22:80:173,0,255	0/1:56,33:89:255,0,255
+chr21	10081399	chr21:10081399:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,5:41:0,46,255	0/1:14,7:22:43,0,126	0/0:22,0:22:0,62,255
+chr21	10081542	chr21:10081542:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTTATCATCTATCTATTTATCATCTATCTATC	<16.5>,<19.5>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,1,9:10:81,91,203,19,5,0	2/2:0,0,5:5:48,62,126,13,15,0	1/2:0,3,2:5:60,19,36,53,0,61
+chr21	10082927	chr21:10082927:M	TTTTCTTTTGCTTTCTTTTGTTTTTTTT	<5.4>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:61,2:63:0,151,255	0/0:44,0:44:0,125,255	0/1:63,28:92:146,0,255
+chr21	10094384	chr21:10094384:M	AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:9:1,0,66	0/1:5,3:10:20,0,46	0/0:7,1:8:0,9,78
+chr21	10095588	chr21:10095588:M	TTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTGTTTTTG	<6.2>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:22,6:28:106,0,255	0/0:28,0:28:0,84,255	0/1:16,10:26:239,0,255
+chr21	10098968	chr21:10098968:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:25:0,69,255	0/0:35,0:35:0,96,255	0/1:22,8:30:16,0,188
+chr21	10100032	chr21:10100032:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,9:41:1,0,235	0/1:21,15:40:61,0,157	0/0:50,13:65:0,19,255
+chr21	10105041	chr21:10105041:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:20:17,0,81	0/1:5,2:9:7,0,35	0/0:11,0:17:0,14,109
+chr21	10106363	chr21:10106363:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:18:255,20,0	1/1:1,9:13:200,6,0	0/1:1,1:6:32,0,15
+chr21	10108527	chr21:10108527:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,5:11:76,0,39	0/1:6,7:19:87,0,108	0/0:14,0:16:0,41,248
+chr21	10110321	chr21:10110321:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:45,21:66:194,0,255	0/1:31,20:52:198,0,255	0/0:55,0:55:0,162,255
+chr21	10118947	chr21:10118947:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<18>	.	.	Motif=GA	GT:AD:DP:PL	0/1:8,10:26:98,0,119	0/1:0,15:32:255,0,9	0/0:9,0:25:0,40,214
+chr21	10122154	chr21:10122154:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,5:48:0,4,255	0/1:26,15:41:255,0,255	0/0:51,0:54:0,156,255
+chr21	10122778	chr21:10122778:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,4:12:19,19,75,0,11,40	0/1:3,3,0:7:17,0,18,30,23,75	0/0:12,0,2:15:0,39,161,9,114,105
+chr21	10123588	chr21:10123588:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:5,10,18:35:178,151,255,67,0,135	1/2:6,12,8:27:95,39,118,71,0,182	2/2:2,0,21:23:202,255,255,40,62,0
+chr21	10124207	chr21:10124207:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:13:168,15,0	1/1:0,16:24:255,53,0	1/1:2,16:24:255,24,0
+chr21	10135895	chr21:10135895:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:16:13,0,84	0/1:3,7:10:56,0,8	0/1:8,4:15:29,0,66
+chr21	10138622	chr21:10138622:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,4:49:0,78,255	0/0:25,1:30:0,51,255	0/1:31,11:43:29,0,255
+chr21	10149470	chr21:10149470:M	AATAAATAAATAAATAAATAA	<6.2>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:21,18:39:126,0,164	0/1:20,15:35:94,0,157	0/0:47,0:47:0,131,255
+chr21	10165429	chr21:10165429:M	TATATATGTATATTATACATATATATGCATGTATATATATGAATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:22,20:42:255,0,255	0/1:32,15:47:255,0,255	0/1:19,15:34:255,0,255
+chr21	10270636	chr21:10270636:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:45,7:53:0,71,255	0/1:30,11:41:15,0,255	0/0:31,9:40:0,7,255
+chr21	10270664	chr21:10270664:M	ATATATAATATATATCATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,7:45:0,48,255	0/1:21,11:32:42,0,255	0/1:21,9:30:23,0,255
+chr21	10271575	chr21:10271575:M	ATATCTATAATATATATTATATATATTTTATATTATATTATCTATACTTAAATATATATATAAATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:7,12:19:94,0,134	0/1:1,4:5:36,0,13	0/1:2,5:7:42,0,34
+chr21	10272705	chr21:10272705:M	ATATAATATACATTATTATATATTATATATGAAATTATATAATATAATTATATTTAATATAAGATATATATAATATGATATATAACATATATAATATA	<27>	.	.	Motif=ATATA	GT:AD:DP:PL	1/1:0,11:11:138,31,0	1/1:0,2:2:25,6,0	1/1:0,15:15:188,42,0
+chr21	10273835	chr21:10273835:M	TATATTATTATATATTATTATATTATATATAATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,58:69:255,0,104	1/1:0,29:29:255,80,0	1/1:1,46:47:255,103,0
+chr21	10273898	chr21:10273898:M	TATATATATGTTATATATATTAAATATATAATTAATATCTGTAATATATATAACATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,27:41:223,0,188	0/1:4,14:19:120,0,56	0/1:3,20:23:181,0,16
+chr21	10325022	chr21:10325022:M	ATAATATTATATAATATATAATAATATTAAATTAAATAATAATTATAATA	<17.7>	.	.	Motif=ATA	GT:AD:DP:PL	1/1:0,6:7:102,18,0	.	.
+chr21	10327150	chr21:10327150:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:39,85:167:255,0,255	0/1:30,108:165:255,0,255	0/1:36,50:170:255,0,255
+chr21	10327672	chr21:10327672:M	TTTTTTGTTTTTTTGTTTTTGTTTTTTGTTTTTT	<35>,<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:30,32,17:105:255,0,255,80,47,255	1/2:21,44,41:130:255,255,255,255,0,255	0/1:72,39,20:146:255,0,255,108,255,255
+chr21	10331685	chr21:10331685:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:165,58:227:255,0,255	0/1:122,80:212:255,0,255	0/1:132,32:198:41,0,255
+chr21	10334325	chr21:10334325:M	ATATATATATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:56,14:77:0,24,255	0/1:21,22:58:135,0,186	0/0:64,16:89:0,28,255
+chr21	10334340	chr21:10334340:M	TTTTTTTTTCTTTCTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:54,15:71:193,0,255	0/0:36,0:38:0,113,255	0/1:38,22:69:255,0,255
+chr21	10334799	chr21:10334799:M	TTTTTTCTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:49,21:72:255,0,255	0/1:50,13:67:155,0,255	0/1:65,23:93:255,0,255
+chr21	10336724	chr21:10336724:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,10,14:45:255,79,255,0,240,255	0/2:11,10,12:39:255,20,228,0,120,255	0/1:17,14,11:50:255,0,255,38,252,255
+chr21	10340305	chr21:10340305:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:127,13,51:196:255,255,255,0,255,255	0/2:91,17,62:175:255,255,255,0,255,255	0/1:88,52,19:161:255,0,255,255,255,255
+chr21	10341491	chr21:10341491:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:59,76:184:255,0,255	0/1:31,123:179:255,0,255	0/1:90,15:168:39,0,255
+chr21	10348141	chr21:10348141:M	AAAAACAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:67,101,39:210:255,0,255,255,255,255	0/1:53,106,28:189:255,0,255,255,255,255	1/2:19,116,50:189:255,255,255,255,0,255
+chr21	10348506	chr21:10348506:M	AAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:73,48,33:160:255,0,255,250,255,255	0/2:66,39,56:164:255,255,255,0,255,255	0/1:73,47,35:157:255,0,255,197,255,255
+chr21	10353496	chr21:10353496:M	TTTTTTTTGTTTTTTTTTTGTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:35,82:161:255,0,255	0/1:35,56:141:255,0,255	0/1:35,66:134:255,0,255
+chr21	10355841	chr21:10355841:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,29,2:59:255,17,0,255,59,255	1/1:1,43,3:63:255,106,0,255,84,255	1/2:5,13,14:40:255,98,168,82,0,152
+chr21	10357174	chr21:10357174:M	TATATATATATGTATATA	<10>,<12>	.	.	Motif=TA	GT:AD:DP:PL	0/1:92,52,28:190:255,0,255,56,255,255	0/2:47,17,24:88:255,255,255,0,255,255	0/1:72,43,21:146:255,0,255,120,255,255
+chr21	10357635	chr21:10357635:M	CTTTCTTTCTTT	<1.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:22,8:34:180,0,255	0/1:26,11:39:214,0,255	0/0:28,3:33:0,8,255
+chr21	10367657	chr21:10367657:M	CACACACACACACACACACACACACACAGACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/1:34,45:198:255,0,255	0/1:43,61:210:255,0,255	0/1:25,18:172:255,0,255
+chr21	10370540	chr21:10370540:M	CTAGCTAGCTAGCT	<2.5>	.	.	Motif=CTAG	GT:AD:DP:PL	0/1:183,86:269:255,0,255	0/1:152,71:223:255,0,255	0/1:167,83:250:255,0,255
+chr21	10370588	chr21:10370588:M	TCTACTATATATCCATCATCTATCTATTATCCATCCATCTATCCATCTATCTATATATGTATTTATCTAT	<16.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:45,20:74:47,0,255	0/0:50,16:72:0,2,255	0/0:51,13:81:0,29,255
+chr21	10370708	chr21:10370708:M	CTAGCTAGCTAGCT	<2.5>	.	.	Motif=CTAG	GT:AD:DP:PL	0/1:137,55:197:112,0,255	0/1:140,51:198:79,0,255	0/0:150,44:201:0,0,255
+chr21	10370723	chr21:10370723:M	TCTATCTATCTACCTATC	<3.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:53,47:108:255,0,255	0/1:58,53:117:255,0,255	0/1:70,47:134:255,0,255
+chr21	10372020	chr21:10372020:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:76,126:248:255,0,255	0/1:77,138:231:255,0,255	0/1:80,74:193:255,0,255
+chr21	10372841	chr21:10372841:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:37:44,0,61	0/1:4,14:30:63,0,34	0/1:8,5:22:3,0,52
+chr21	10376581	chr21:10376581:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,80:127:255,0,37	0/1:16,61:110:255,0,112	0/1:20,73:119:255,0,157
+chr21	10377648	chr21:10377648:M	TTTTTTTTCTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:42,31:77:92,0,228	0/1:34,28:63:97,0,160	0/0:72,25:98:0,17,255
+chr21	10379736	chr21:10379736:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:55,18:76:0,17,255	0/1:45,20:66:26,0,255	0/0:80,16:103:0,108,255
+chr21	10381537	chr21:10381537:M	ACACACACACGCATACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:42,38:80:255,0,255	0/1:31,45:78:255,0,255	0/1:64,22:87:255,0,255
+chr21	10381570	chr21:10381570:M	ACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:55,48:104:255,0,255	0/1:37,67:105:255,0,255	0/1:67,39:106:255,0,255
+chr21	10382554	chr21:10382554:M	AAAAAAAAAAAAACAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:31,7:64:34,0,255	0/1:25,11:41:154,0,255	0/1:37,14:95:171,0,255
+chr21	10382572	chr21:10382572:M	AAGAAGAAGAAGAAAGAAAGAAAACAAAAAAGAAGAAGAAGAAAGAAAGAAAAAAAAGAAAAGAA	<22.3>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,10:18:119,34,0	1/1:0,9:17:77,22,0	1/1:0,9:21:121,35,0
+chr21	10382937	chr21:10382937:M	AAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:3,8,25:57:255,57,126,21,7,0	0/2:4,0,35:72:255,156,255,0,110,18	0/1:1,25,12:64:255,0,124,87,64,115
+chr21	10386555	chr21:10386555:M	AATTAATTAATTAA	<2.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:58,94:153:255,0,255	0/1:35,115:150:255,0,194	0/1:62,108:171:255,0,255
+chr21	10386619	chr21:10386619:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,78:78:255,231,0	1/1:2,63:65:255,155,0	1/1:0,94:94:255,255,0
+chr21	10386831	chr21:10386831:M	TTTTTTGTTTTTTGGTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,15:46:102,0,255	0/0:35,0:39:0,100,255	0/1:22,29:57:255,0,187
+chr21	10387432	chr21:10387432:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:92,38:150:78,0,255	0/1:78,39:122:38,0,255	0/0:115,26:165:0,27,255
+chr21	10388268	chr21:10388268:M	AGGAGGAGGAGGAGGAGCGGGAGGAGCAGGAGGAG	<10.7>	.	.	Motif=AGG	GT:AD:DP:PL	0/1:23,13:47:28,0,120	0/1:18,12:34:33,0,88	0/0:40,12:56:0,21,255
+chr21	10388964	chr21:10388964:M	AAAAATAAAAATAAAAATAAA	<4.5>	.	.	Motif=AAAAAT	GT:AD:DP:PL	0/1:163,35:202:82,0,255	0/1:128,26:160:9,0,255	0/1:141,68:210:255,0,255
+chr21	10392835	chr21:10392835:M	TGTTTTTTGTTTGTTTTTGTATTTTTGTTTTTTTGTTTTTGT	<6.7>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/1:66,83:158:255,0,255	0/1:66,72:138:255,0,255	0/1:63,52:119:255,0,255
+chr21	10395953	chr21:10395953:M	TCTCTGTCTCCCTCTCTCTCTCTGTCTGTCTCTGTTTCTGCTTCTCTGTCTCCATCTCTTTCTCTCTCTGTGTCTCTCT	<11.7>,<12.5>	.	.	Motif=TCTCTC	GT:AD:DP:PL	0/2:10,4,7:22:95,57,255,0,112,147	0/1:4,7,2:14:122,0,76,96,38,155	0/1:14,7,3:24:93,0,255,78,205,255
+chr21	10396039	chr21:10396039:M	TCTCTGTCTCTGTCTTTCTCTCCATCTCTGTATCTGTC	<7>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/1:0,16:16:249,46,0	1/1:0,11:11:171,32,0	1/1:0,17:17:255,49,0
+chr21	10398128	chr21:10398128:M	AAAACAAAACAAA	<1.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:135,71:206:255,0,255	0/1:110,75:185:255,0,255	0/1:123,51:174:255,0,255
+chr21	10398226	chr21:10398226:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:60,8:96:0,98,255	0/1:52,25:92:188,0,255	0/0:75,3:107:0,255,255
+chr21	10399238	chr21:10399238:M	TTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,21:63:255,0,27	0/1:3,20:71:255,0,71	0/1:8,25:64:255,0,248
+chr21	10401726	chr21:10401726:M	CAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCA	<9.4>	.	.	Motif=CAAAC	GT:AD:DP:PL	1/1:13,66:122:255,153,0	1/1:19,35:110:255,73,0	1/1:10,65:103:255,134,0
+chr21	10403944	chr21:10403944:M	TTTTATTTATTTTGTTTTACTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<12.6>,<13.4>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:2,12,0:18:107,16,0,123,37,174	1/2:0,8,4:12:137,49,18,71,0,69	1/1:3,22,0:30:205,36,0,226,63,255
+chr21	10404536	chr21:10404536:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:46,15:62:92,0,255	0/1:42,28:71:255,0,255	0/0:77,9:87:0,95,255
+chr21	10405054	chr21:10405054:M	AACAACAACAACAACAACAACAACAACAAAAAACAAAGAAAACAAACAACAACAA	<18>,<19.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/2:9,3,16:35:75,105,255,0,59,64	1/2:0,8,14:32:150,90,255,84,0,127	0/2:10,2,32:56:205,255,255,0,86,8
+chr21	10405906	chr21:10405906:M	ATTTTATTTATTTTAATTTTATTTTTTTT	<5.6>	.	.	Motif=ATTTT	GT:AD:DP:PL	0/1:24,25:56:51,0,17	1/1:0,44:54:251,93,0	0/0:51,13:72:0,30,147
+chr21	10406088	chr21:10406088:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:21,13:58:247,0,255	0/1:22,19:64:255,0,255	0/1:21,9:77:255,0,255
+chr21	10411695	chr21:10411695:M	AAAACCAAACCAAACTAAACCAAAACAAAAAAAAC	<6.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:52,25:92:21,0,74	0/1:26,32:59:41,0,20	0/0:75,11:95:0,70,238
+chr21	10415921	chr21:10415921:M	AAAACAAAACAAAACAAAACAAAAC	<4>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:47,214:262:255,225,0	1/1:28,218:246:255,255,0	1/1:55,204:260:255,148,0
+chr21	10418381	chr21:10418381:M	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:22,24:164:255,0,255	0/1:10,27:102:255,0,255	0/1:3,35:143:255,0,255
+chr21	10420350	chr21:10420350:M	TTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,41:62:255,0,184	0/1:5,30:37:255,0,35	0/1:12,38:60:255,0,190
+chr21	10422009	chr21:10422009:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:50,97:147:255,0,82	1/1:9,138:147:255,255,0	0/1:50,88:138:255,0,103
+chr21	10422126	chr21:10422126:M	TTTTTTTTTTTTTTT	<13>,<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/3:7,25,39,14:110:255,238,255,193,255,255,255,99,0,255	1/3:10,26,15,26:94:255,202,255,255,255,255,255,0,69,255	1/3:4,35,33,15:117:255,217,255,255,255,255,255,0,25,255
+chr21	10423314	chr21:10423314:M	TATATATATATTTATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:167,77:244:255,0,255	0/1:114,89:203:255,0,255	0/1:182,44:226:146,0,255
+chr21	10425218	chr21:10425218:M	TTTTTTTTTTCTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:91,86,93:272:255,141,183,0,114,255	1/1:89,116,84:292:255,7,0,77,49,255	0/1:127,72,37:239:240,0,255,183,255,255
+chr21	10427526	chr21:10427526:M	ACACACACACACAAACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:138,167:313:255,0,255	0/1:228,140:371:255,0,255	0/1:173,180:360:255,0,255
+chr21	10431007	chr21:10431007:M	TTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:69:255,84,0	1/1:1,36:87:255,187,0	0/1:2,13:44:255,0,4
+chr21	10431777	chr21:10431777:M	TCTCTCTCTCT	<3.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:168,90:330:255,0,255	0/1:184,70:339:175,0,255	0/0:260,34:335:0,255,255
+chr21	10434161	chr21:10434161:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:11,84:163:255,128,0	1/1:14,107:218:255,255,0	1/1:9,101:198:255,112,0
+chr21	10434867	chr21:10434867:M	TTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.8>,<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:11,16,21:64:159,103,244,90,0,206	0/2:16,0,19:45:92,171,255,0,100,48	1/2:0,25,20:51:255,159,213,210,0,255
+chr21	10435892	chr21:10435892:M	TATTATTATTA	<2.7>	.	.	Motif=TAT	GT:AD:DP:PL	0/1:220,46:266:106,0,255	0/1:212,65:277:255,0,255	0/1:201,77:278:255,0,255
+chr21	10437769	chr21:10437769:M	ATATATATATATATATATATATATATA	<10.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,4,9:41:157,0,70,133,63,255	1/2:0,2,5:12:133,45,27,99,0,124	1/1:1,14,2:38:255,3,0,255,73,255
+chr21	10439737	chr21:10439737:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,58:108:255,0,72	1/1:1,75:109:255,116,0	0/1:29,43:98:255,0,180
+chr21	10439930	chr21:10439930:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:11,17,41:73:255,244,163,37,0,40	0/2:33,9,32:79:255,175,247,0,162,255	1/2:3,21,37:75:255,255,186,101,0,22
+chr21	10445599	chr21:10445599:M	CTTTCTTTTCTTACTTTCTTT	<2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:50,12:65:171,0,255	0/1:36,16:56:255,0,255	0/1:68,9:81:144,0,255
+chr21	10446180	chr21:10446180:M	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	<3.7>,<4.7>	.	.	Motif=TTTGTT	GT:AD:DP:PL	1/2:17,34,91:142:255,255,255,255,0,255	1/2:15,55,75:145:255,255,255,255,0,255	2/2:13,18,116:147:255,255,255,234,74,0
+chr21	10447391	chr21:10447391:M	TTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:47:255,111,0	1/1:0,14:31:255,67,0	1/1:0,6:44:255,72,0
+chr21	10447576	chr21:10447576:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,47:152:255,0,255	0/1:12,43:118:255,0,255	0/1:36,40:132:255,0,255
+chr21	10449373	chr21:10449373:M	ATATATATGTATGTATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:0,77:156:255,0,255	0/1:1,111:171:255,0,255	0/1:0,78:161:255,0,255
+chr21	10449701	chr21:10449701:M	AAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,73:138:255,0,1	1/1:0,81:129:255,255,0	0/1:48,32:124:255,0,255
+chr21	10451234	chr21:10451234:M	TTTTTTTTTTTTT	<11>,<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/3:11,22,52,46:134:255,255,255,255,255,255,255,237,0,255	1/2:6,45,75,14:145:255,255,255,214,0,46,255,255,191,255	2/3:13,45,48,43:155:255,186,255,236,255,255,255,22,0,255
+chr21	10456321	chr21:10456321:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,12,2:20:255,0,34,70,36,85	1/2:2,9,5:18:255,1,23,25,0,25	1/1:1,11,1:20:255,10,0,106,20,86
+chr21	10459762	chr21:10459762:M	TTTTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:42,86,88:218:255,255,255,255,0,255	1/2:22,103,64:191:255,255,255,255,0,255	1/2:54,70,99:228:255,255,255,255,0,255
+chr21	10461781	chr21:10461781:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:48,65:160:255,0,255	0/1:17,91:163:255,0,40	0/1:56,34:131:255,0,255
+chr21	10468480	chr21:10468480:M	TGTGTGTGTGTGTGTATGTGTGTGTGTCTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,40:67:255,0,201	1/1:3,44:59:255,62,0	0/1:45,12:71:91,0,255
+chr21	10469402	chr21:10469402:M	AACAGCAACAACAACAGCAACAACAGCAACAACAACAACAA	<15.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:33,11:51:98,0,255	0/1:35,6:46:2,0,255	0/1:41,32:80:255,0,255
+chr21	10470052	chr21:10470052:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:18:138,0,189	1/1:0,10:15:255,11,0	0/1:20,10:33:195,0,255
+chr21	10470069	chr21:10470069:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<15>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,7,30,8:59:221,166,255,68,62,30,239,221,0,255	2/2:0,0,43,7:67:194,255,255,38,154,0,244,255,1,255	1/3:0,15,5,15:49:255,144,255,255,208,255,255,0,140,255
+chr21	10471357	chr21:10471357:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:112,11,0	1/1:0,0:1:23,3,0	1/1:0,3:5:124,15,0
+chr21	10472288	chr21:10472288:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:45,98,32:177:255,0,253,255,92,255	1/2:14,100,55:169:255,238,110,255,0,255	0/1:62,81,28:176:255,0,255,255,229,255
+chr21	10474923	chr21:10474923:M	TTTTGTTTTGTTTTG	<2.8>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:53,80:133:255,0,255	0/1:41,130:171:255,0,255	0/1:52,76:134:255,0,255
+chr21	10476863	chr21:10476863:M	TTTTGTTTTTTGTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,17:65:56,0,255	0/1:36,11:47:18,0,255	0/0:67,12:80:0,59,255
+chr21	10477785	chr21:10477785:M	TATTTCTTTATTTTATTTTTATTTATTT	<6>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:34,79:122:255,0,30	1/1:27,82:109:255,54,0	0/1:32,67:125:194,0,128
+chr21	10486318	chr21:10486318:M	ATATATATATATATATATATATATA	<7.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,32:49:255,255,255,255,0,255	2/2:0,0,34:38:255,255,255,105,101,0	1/2:0,27,32:60:255,255,255,255,0,255
+chr21	10486645	chr21:10486645:M	TTTTTTTTCTTCTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:38:9,0,240	0/0:23,2:32:0,44,255	0/1:23,15:45:83,0,197
+chr21	10487145	chr21:10487145:M	TTTCTTTTTTTTTTCTTTCTTTCTTT	<5.5>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:24,28:69:255,0,255	0/1:24,26:65:255,0,240	0/1:35,28:72:255,0,255
+chr21	10489767	chr21:10489767:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:24,0,28	0/1:5,4:10:33,0,34	0/1:7,4:12:19,0,57
+chr21	10495296	chr21:10495296:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:16:37,0,140	0/0:11,0:11:0,32,178	0/0:24,1:25:0,56,255
+chr21	10497571	chr21:10497571:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:10:37,0,34	1/1:1,9:10:105,15,0	0/0:27,4:36:0,36,255
+chr21	10501513	chr21:10501513:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:25:255,65,0	1/1:0,18:25:255,53,0	1/1:0,24:26:255,77,0
+chr21	10501938	chr21:10501938:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,34:36:255,70,0	1/1:0,34:34:255,100,0	1/1:1,38:40:255,99,0
+chr21	10510877	chr21:10510877:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,31:57:255,255,167,241,0,83	2/2:0,4,29:34:255,255,242,100,49,0	1/2:0,21,25:63:255,255,126,209,0,94
+chr21	10511667	chr21:10511667:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,8,4:14:255,255,255,64,64,24,87,84,0,45	3/3:0,0,0,1:4:80,78,77,45,45,36,11,11,10,0	1/2:0,6,7,3:18:255,192,151,134,0,85,211,28,89,171
+chr21	10512046	chr21:10512046:M	TTTTCTTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:9:49,0,0	1/1:0,6:8:89,22,0	0/1:1,2:5:21,0,9
+chr21	10512370	chr21:10512370:M	TTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,120,0	1/1:0,29:29:255,87,0	1/1:3,47:54:255,70,0
+chr21	10516135	chr21:10516135:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,18:33:255,253,158,189,0,94	2/2:0,1,21:24:255,255,255,72,54,0	1/2:0,13,22:39:255,255,180,212,0,108
+chr21	10516457	chr21:10516457:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,53:53:255,157,0	1/1:0,35:35:255,103,0	1/1:0,88:88:255,255,0
+chr21	10516879	chr21:10516879:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT	<10.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:7,6:17:20,0,55	0/1:5,8:13:47,0,17	0/0:24,1:28:0,61,255
+chr21	10516923	chr21:10516923:M	TATCTATCTGTCTATCTGTCTATCTATCTATCTATCT	<11.2>,<12.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,22:35:255,209,110,117,0,22	2/2:0,0,15:17:255,174,131,45,37,0	1/2:0,10,12:28:255,146,75,92,0,24
+chr21	10518572	chr21:10518572:M	CAAACAAACAAACAAACAAACAAACAAA	<6>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,60:60:255,178,0	1/1:0,34:34:255,100,0	1/1:0,69:69:255,204,0
+chr21	10519316	chr21:10519316:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,38:40:255,99,0	1/1:2,22:24:255,35,0	1/1:2,47:51:255,104,0
+chr21	10527134	chr21:10527134:M	CTCTCTCTCTCTCTCTCTCTCTCTC	<14.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:22,16:40:255,0,255	0/0:32,0:32:0,95,255	0/1:46,10:59:50,0,255
+chr21	10528201	chr21:10528201:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,38,16:54:255,255,116,255,0,255	2/2:0,2,33:37:255,255,255,105,75,0	1/2:5,63,19:88:255,241,74,255,0,255
+chr21	10529184	chr21:10529184:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,4:22:7,0,221	0/0:10,0:13:0,34,184	0/1:17,6:24:31,0,224
+chr21	10540010	chr21:10540010:M	AAAAACCAAAAACAACAACAACAAACAAAAACAAAAAACCAAAACAAAA	<7.5>	.	.	Motif=AAAAAC	GT:AD:DP:PL	0/1:29,11:40:166,0,255	0/0:27,0:27:0,81,255	0/1:33,19:52:255,0,255
+chr21	10541479	chr21:10541479:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:37,20:59:255,0,255	0/0:29,0:31:0,90,255	0/1:60,17:79:228,0,255
+chr21	10559916	chr21:10559916:M	ATATATATCTATATATACATATATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:34,8:42:54,0,255	0/0:27,0:27:0,81,255	0/1:54,22:76:255,0,255
+chr21	10567108	chr21:10567108:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0,0:29:0,81,255,83,255,255	0/2:8,0,6:14:49,90,255,0,119,79	0/1:14,14,1:34:255,0,255,255,195,255
+chr21	10572005	chr21:10572005:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,12:35:43,0,144	0/1:12,9:22:47,0,70	0/1:32,13:48:38,0,217
+chr21	10575827	chr21:10575827:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:57,1:58:0,148,255	0/0:39,0:39:0,107,255	0/1:66,24:93:48,0,255
+chr21	10576826	chr21:10576826:M	TATACATATATACATATATATATATATATATATATATATATATATATATATA	<18>,<27>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,12,5:26:255,0,194,255,13,255	0/0:0,0,0:2:0,6,58,5,23,17	1/2:0,8,4:13:214,23,79,196,0,192
+chr21	10584880	chr21:10584880:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,11:26:169,93,126,130,0,197	0/1:12,8,0:21:30,0,59,83,85,220	1/2:16,21,15:53:89,15,166,80,0,255
+chr21	10585242	chr21:10585242:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<28>,<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,14,1:28:216,0,159,135,106,187	0/2:6,0,11:17:67,85,185,0,60,16	0/1:32,8,3:43:41,0,255,45,255,255
+chr21	10588198	chr21:10588198:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,17:49:37,0,179	0/0:28,1:31:0,69,255	0/1:34,35:73:173,0,145
+chr21	10592806	chr21:10592806:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>	.	.	Motif=GT	GT:AD:DP:PL	0/0:44,0:45:0,133,255	0/0:31,0:33:0,98,255	0/1:42,16:64:140,0,255
+chr21	10597401	chr21:10597401:M	TTTTCTTTTTTCTTTTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:2,0,93	0/0:5,1:6:0,3,59	0/1:12,11:28:136,0,101
+chr21	10599800	chr21:10599800:M	TTAGTTAGTTAGTTAGTTAGTTAGTTAGTT	<6.5>	.	.	Motif=TTAG	GT:AD:DP:PL	0/0:49,0:63:0,21,255	0/1:20,16:36:100,0,150	0/0:60,1:72:0,67,255
+chr21	10611944	chr21:10611944:M	AAAAAAAAAAA	<12>,<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,18,0,26:45:255,255,255,255,200,242,142,0,126,164	3/3:0,0,0,45:45:255,255,255,255,255,255,135,131,108,0	2/3:0,15,26,22:64:255,255,255,178,66,36,227,48,0,182
+chr21	10615293	chr21:10615293:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,4,22:41:255,189,242,0,114,196	2/2:0,2,24:30:255,255,255,83,58,0	0/1:21,23,11:57:202,0,92,78,124,255
+chr21	10617403	chr21:10617403:M	GAAGGAAGGAAAAAGGAGGAAAGGAAGGGAGGGAGGAAGGAAG	<1.8>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,5:5:255,15,0	1/1:0,1:1:52,3,0	1/1:0,2:2:106,6,0
+chr21	10617559	chr21:10617559:M	GAAAGAAAGAAGGAAAGAAGGAAGGAAGGAGAAAAGAAAGAAAAGAAAGGAAAAGAAAAAAAAGAAAGA	<16.5>,<17.5>	.	.	Motif=GAAA	GT:AD:DP:PL	2/2:0,0,9:15:47,64,107,16,19,0	2/2:0,0,8:8:45,62,100,16,22,0	1/2:0,10,16:31:184,86,139,100,0,52
+chr21	10617758	chr21:10617758:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,30:51:177,0,83	1/1:1,39:40:255,94,0	0/1:21,40:61:252,0,56
+chr21	10620402	chr21:10620402:M	AAAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,15,8:23:255,86,18,153,0,85	1/1:0,20,0:20:255,60,0,248,51,189	1/2:0,16,8:24:255,86,15,162,0,91
+chr21	10637210	chr21:10637210:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,20:20:255,59,0
+chr21	10641224	chr21:10641224:M	ACACACACACACACACACACACGCACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,35:35:255,92,0	1/1:0,21:23:235,60,0	1/1:0,51:68:255,178,0
+chr21	10650893	chr21:10650893:M	ACACACACACACACACACACACACACACACACACACA	<25.5>,<26.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,5,5,0:12:253,45,12,51,0,20,195,41,50,173	2/2:0,0,3,0:3:85,31,22,9,7,0,53,29,9,44	1/3:0,3,1,8:18:255,197,162,135,104,91,73,0,7,33
+chr21	10732811	chr21:10732811:M	CCTTCCCCTTCC	<1.8>	.	.	Motif=CCTTCC	GT:AD:DP:PL	1/1:2,47:49:255,93,0	1/1:2,36:38:231,69,0	1/1:0,73:73:255,160,0
+chr21	10738615	chr21:10738615:M	CATTCCATTTGATTCCATTCGATTC	<27>	.	.	Motif=CATTC	GT:AD:DP:PL	0/1:42,25:67:109,0,255	0/1:34,16:50:48,0,255	0/1:72,27:99:40,0,255
+chr21	10738670	chr21:10738670:M	CATTCGATTCCATTCC	<27>	.	.	Motif=CATTC	GT:AD:DP:PL	0/1:54,25:79:73,0,255	0/1:39,16:55:33,0,255	0/1:81,27:108:13,0,255
+chr21	10738725	chr21:10738725:M	ATTCCATTCCA	<27>	.	.	Motif=ATTCC	GT:AD:DP:PL	0/1:62,25:87:56,0,255	0/1:30,16:46:64,0,255	0/1:82,27:109:17,0,255
+chr21	10774031	chr21:10774031:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,56:56:255,165,0	1/1:0,42:42:255,124,0
+chr21	10775774	chr21:10775774:M	AATAAAGTAAATAAATAAAATAAATAAATAAAT	<9>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:1,30:31:255,68,0	1/1:1,19:20:255,35,0	1/1:1,45:46:255,113,0
+chr21	12997128	chr21:12997128:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:62,2:64:0,154,255	0/0:70,2:75:0,185,255	0/1:46,21:69:129,0,255
+chr21	12999938	chr21:12999938:M	AAAAAATAAAAAAAAAAAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,24:43:182,0,88	0/1:24,8:35:9,0,206	0/1:14,23:40:181,0,60
+chr21	13000071	chr21:13000071:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.5>,<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/2:7,17,13:37:255,9,93,58,0,105	0/1:8,31,0:40:255,0,97,255,157,255	0/1:14,28,10:53:255,0,224,219,169,255
+chr21	13001123	chr21:13001123:M	AAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGA	<17.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,7:10:40,0,3	1/1:0,6:7:55,15,0	0/0:12,0:15:0,37,134
+chr21	13005366	chr21:13005366:M	GTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:28,13:42:117,0,255	0/1:27,23:53:255,0,255	0/0:42,8:51:0,5,255
+chr21	13007695	chr21:13007695:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,0:14:0,0,96	0/0:14,1:19:0,19,155	0/1:13,7:26:77,0,112
+chr21	13011665	chr21:13011665:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,5:25:22,0,191	0/1:16,9:26:55,0,165	0/0:28,2:31:0,59,255
+chr21	13012234	chr21:13012234:M	AAAAAACAAAAAAAAAAAACAAAAA	<26>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,23,10:39:255,254,190,255,0,255	1/2:11,13,18:44:255,255,255,21,0,255	0/1:10,17,0:39:112,0,45,124,57,255
+chr21	13014603	chr21:13014603:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,15,7:44:88,0,197,109,93,255	0/2:29,2,17:49:82,190,255,0,253,240	0/1:24,20,9:53:100,0,248,134,126,255
+chr21	13016283	chr21:13016283:M	AAAAAAAAAAGAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:24,5,12:41:132,82,255,0,255,255	0/1:27,18,1:47:255,0,255,255,255,255	0/2:32,0,8:41:8,107,255,0,255,255
+chr21	13016950	chr21:13016950:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,12:47:180,0,255	0/1:34,29:65:255,0,255	0/1:28,11:45:178,0,255
+chr21	13017296	chr21:13017296:M	TTTTTTTATTTTTTTGTTTTTTATTTTTTATTTATTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	0/2:18,8,10:36:255,27,255,0,255,255	0/1:26,15,0:41:255,0,255,196,255,255	0/2:23,5,5:33:122,0,255,0,255,255
+chr21	13017975	chr21:13017975:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,13:40:255,0,255	0/1:24,14:39:255,0,255	0/1:20,17:39:255,0,255
+chr21	13020152	chr21:13020152:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:45,11:56:26,0,255	0/0:46,2:53:0,117,255	0/1:36,14:56:92,0,255
+chr21	13020463	chr21:13020463:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,8:14:67,0,26	0/1:5,2:8:3,0,51	0/1:6,5:13:33,0,46
+chr21	13021130	chr21:13021130:M	AAAAAACAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:47,37:84:255,0,255	0/1:36,42:79:255,0,255	0/1:46,33:80:255,0,255
+chr21	13021854	chr21:13021854:M	AAACAAAAAAACAAACAAAAACAAACAAACAAACAAA	<6.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:32,35:71:255,0,255	0/1:27,22:55:255,0,255	0/1:33,22:57:255,0,255
+chr21	13026281	chr21:13026281:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:33,15,18:67:255,84,255,0,255,255	0/2:38,0,38:76:255,255,255,0,255,255	0/1:35,45,0:80:255,0,255,255,255,255
+chr21	13028775	chr21:13028775:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,0:3:20,0,20	0/1:3,5:13:147,0,42	0/1:2,3:8:60,0,50
+chr21	13032595	chr21:13032595:M	AAAATAAAATAAAATAAAATAAAATTAAAATAAAATAAAATAAAATAAAATAAAAATAAA	<7.8>,<8.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:18,4,3:25:74,0,255,14,255,255	0/2:5,0,6:11:134,82,188,0,121,104	0/1:12,10,0:22:211,0,255,139,255,255
+chr21	13034143	chr21:13034143:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:34,38:78:255,0,255	0/1:37,34:73:255,0,255	0/1:32,35:72:255,0,255
+chr21	13034350	chr21:13034350:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0,0:1:0,3,27,3,27,27	2/2:0,0,3:5:85,83,88,4,12,0	0/1:1,4,0:7:118,0,6,108,24,125
+chr21	13034668	chr21:13034668:M	AAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:38,10:60:158,0,255	0/1:31,21:56:255,0,255	0/1:33,1:54:17,0,255
+chr21	13034845	chr21:13034845:M	TTTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,5,4:11:157,28,51,48,0,71	0/1:2,10,0:13:242,0,16,199,48,225	0/2:8,0,3:12:47,57,253,0,203,194
+chr21	13039472	chr21:13039472:M	AATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:25,8:40:0,20,86	0/1:11,7:18:2,0,23	0/0:19,0:28:0,38,103
+chr21	13039507	chr21:13039507:M	AAAAAGAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:43:255,0,109	0/1:15,12:32:136,0,146	0/0:43,4:49:0,59,255
+chr21	13043998	chr21:13043998:M	TTTTCTTTTTTTCTTTCTCTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:18:189,0,69	0/1:4,8:15:168,0,66	0/1:11,0:22:21,0,241
+chr21	13092357	chr21:13092357:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,6,10:27:183,65,135,0,76,201	0/1:15,10,3:28:86,0,116,67,155,255	0/1:10,21,0:33:184,0,62,220,152,255
+chr21	13093615	chr21:13093615:M	AAAAAAAAAAAAAGAAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:36:255,88,0	1/1:2,30:33:255,65,0	1/1:1,41:42:255,106,0
+chr21	13102290	chr21:13102290:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:41,7:48:0,45,255	0/1:27,10:37:21,0,230	0/0:30,6:36:0,25,255
+chr21	13137904	chr21:13137904:M	ATAATAATAAAATAAAATAAAATAAAA	<4.4>	.	.	Motif=ATAAA	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:28,0:28:0,82,255	0/1:40,15:55:120,0,255
+chr21	13172591	chr21:13172591:M	TTTTTTCTTTTTCTTTCTTTCTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,8:25:147,0,255	0/0:17,0:17:0,51,255	0/1:20,9:31:166,0,255
+chr21	13192562	chr21:13192562:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,55,0	1/1:1,12:13:183,21,0	1/1:0,17:18:255,42,0
+chr21	13196897	chr21:13196897:M	AAAAAAAAAAAAAAAGAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,11:14:121,0,4	0/1:16,6:23:19,0,173	0/1:12,13:25:116,0,102
+chr21	13211837	chr21:13211837:M	TATATATATATATATATTATATATATATATATATATATA	<18.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,14:17:255,32,0	0/1:0,1:2:12,0,6	0/1:3,4:7:51,0,33
+chr21	13224899	chr21:13224899:M	AAAACAAAACAAAACAAGACAAAACAAAACAAGACAAAACAAAACAAAA	<10>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,18:18:255,53,0	1/1:0,20:20:255,59,0
+chr21	13234311	chr21:13234311:M	AAAAAAGAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,17:37:215,0,255	1/1:0,49:50:255,147,0	0/1:30,11:41:84,0,255
+chr21	13246762	chr21:13246762:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,13:23:255,0,182	1/1:0,32:33:255,99,0	0/1:13,16:29:255,0,255
+chr21	13251063	chr21:13251063:M	ATATATATATATA	<8.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,6,4:19:65,0,119,70,124,255	2/2:0,0,4:4:49,49,49,11,11,0	0/0:17,3,1:24:0,7,255,56,255,255
+chr21	13251105	chr21:13251105:M	ATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:14,4:21:0,13,255	0/1:0,4:6:31,0,8	0/0:18,1:23:0,55,255
+chr21	13255290	chr21:13255290:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:21:133,0,115	1/1:0,9:14:169,29,0	0/1:15,8:23:76,0,202
+chr21	13259015	chr21:13259015:M	CTCTTTCTCTTT	<1.7>	.	.	Motif=CTCTTT	GT:AD:DP:PL	0/1:15,16:31:255,0,255	1/1:0,27:27:255,81,0	0/1:13,20:33:255,0,255
+chr21	13261623	chr21:13261623:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,16:38:255,0,255	1/1:0,29:29:255,87,0	0/1:16,18:35:255,0,255
+chr21	13264531	chr21:13264531:M	CACACACACACACACACACACACACACATGCACACACACACA	<23>,<25>,<26>	.	.	Motif=CA	GT:AD:DP:PL	0/1:12,9,0,0:22:201,0,255,237,255,255,240,255,255,255	1/2:0,8,8,0:19:255,208,177,212,0,204,255,138,235,255	0/3:18,1,0,10:30:211,240,255,174,255,255,0,255,255,255
+chr21	13265399	chr21:13265399:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:134,0,96	1/1:3,18:22:250,2,0	0/1:21,12:35:132,0,255
+chr21	13267824	chr21:13267824:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:14,16:30:255,0,255	1/1:0,20:22:255,60,0	0/1:9,14:23:255,0,181
+chr21	13268681	chr21:13268681:M	ACACACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,8:25:77,0,187	1/1:1,32:36:255,58,0	0/1:15,15:32:179,0,197
+chr21	13272272	chr21:13272272:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,19,11:54:255,0,255,105,161,229	0/2:13,11,24:49:251,77,255,0,12,13	0/2:25,8,11:45:83,14,255,0,197,167
+chr21	13278047	chr21:13278047:M	GAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAG	<16.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:15,14:30:187,0,196	1/1:0,14:14:251,41,0	0/1:13,13:27:169,0,160
+chr21	13279121	chr21:13279121:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,13:28:172,0,181	1/1:0,38:38:255,112,0	0/1:26,22:48:255,0,255
+chr21	13290891	chr21:13290891:M	CACACACACACACACAC	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,22:40:255,0,210	1/1:0,33:34:255,100,0	0/1:19,24:45:255,0,225
+chr21	13301756	chr21:13301756:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,10:22:107,0,141	0/1:16,8:26:69,0,188	0/1:16,9:26:78,0,196
+chr21	13316249	chr21:13316249:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,21:47:254,0,255	0/1:20,17:38:189,0,250	0/1:22,20:42:240,0,255
+chr21	13330524	chr21:13330524:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<7.8>,<10.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,18,8:26:255,143,159,255,0,255	1/2:0,8,4:12:255,68,83,203,0,196	0/1:6,10,0:16:232,0,125,253,104,255
+chr21	13335024	chr21:13335024:M	TTTCTTTCTTTCTTTCTTTCTTTTTTTCT	<8.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:21,14:35:166,0,255	0/1:21,13:34:135,0,255	0/1:10,9:19:112,0,132
+chr21	13343201	chr21:13343201:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:23,0,23	1/1:1,6:8:92,7,0	0/1:6,6:12:66,0,67
+chr21	13346590	chr21:13346590:M	TTTTTTTTATTTATTATTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,8:15:174,0,145	0/1:10,12:22:255,0,204	0/1:5,16:21:255,0,72
+chr21	13355921	chr21:13355921:M	ATATACATATATATATATATATATATATATA	<12.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:7,1,11:22:211,113,255,0,147,109	0/1:2,12,0:17:255,0,3,164,36,158	1/2:0,9,7:17:255,81,33,117,0,67
+chr21	13355951	chr21:13355951:M	AGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGA	<31.5>,<67.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,4,4:10:85,37,22,61,0,117	2/2:0,0,4:4:51,51,51,11,11,0	0/0:0,0,0:3:0,5,19,6,24,32
+chr21	13358752	chr21:13358752:M	GAAAAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAA	<6.6>,<6.8>	.	.	Motif=GAAAA	GT:AD:DP:PL	0/1:5,10,0:20:153,0,37,64,38,72	0/2:3,0,7:11:48,35,74,0,36,15	0/1:4,9,0:17:114,0,51,50,49,73
+chr21	13359519	chr21:13359519:M	CCCTGACCCTGACCCGTGACCCTGACCCTTAACCCCTGACCCTGACCCCTATCCCCTGACCCTGACCC	<4.7>,<8>	.	.	Motif=CCCTGA	GT:AD:DP:PL	0/2:7,0,4:11:64,85,246,0,161,149	0/0:6,0,0:6:0,18,156,18,156,156	0/1:7,3,1:11:41,0,152,40,138,198
+chr21	13363222	chr21:13363222:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:25:139,0,158	0/1:13,18:35:226,0,148	0/1:10,9:20:103,0,130
+chr21	13381720	chr21:13381720:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,14,0:25:255,0,218,255,255,255	1/1:1,21,0:22:255,38,0,255,63,255	1/2:0,13,11:25:255,255,255,255,0,255
+chr21	13384063	chr21:13384063:M	TATACATATATATATACACACATATATATGTGTGTATATATATATACACACACATATATATATATAT	<34.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,6:16:16,0,32	0/1:4,2:7:7,0,16	1/1:1,4:7:40,8,0
+chr21	13384129	chr21:13384129:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,7,0:26:38,0,76,86,142,255	0/1:19,5,0:28:3,0,116,77,197,255	1/2:0,7,13:31:255,255,255,100,0,154
+chr21	13389552	chr21:13389552:M	TATATATATATATATATATATATATATATACATATA	<8>,<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,10,2:23:208,0,244,217,91,255	0/1:1,4,0:6:94,0,13,96,11,105	1/2:0,12,11:24:255,124,237,255,0,255
+chr21	13389637	chr21:13389637:M	AACAAAACAAAGCAAA	<2.2>	.	.	Motif=AACAA	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:27,0:27:0,79,255	0/1:11,28:39:255,0,90
+chr21	13392823	chr21:13392823:M	TGTTTGTTTGTTTGTTTGTTT	<4.2>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:26,0:26:0,77,255	0/1:12,10:22:124,0,161
+chr21	13393041	chr21:13393041:M	CACACCACATACACATACACACACACACACACACACACACACACACACA	<21.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:4,0,10:14:137,177,255,0,71,30	0/2:9,0,14:24:167,236,255,0,169,99	1/2:0,7,8:15:255,137,187,218,0,182
+chr21	13405436	chr21:13405436:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:40:0,118,255	0/0:44,0:45:0,132,255	0/1:20,17:37:206,0,255
+chr21	13409899	chr21:13409899:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<19>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,2,0:13:2,0,59,10,46,83	0/2:3,0,3:7:25,41,99,0,31,20	1/2:0,11,1:21:162,36,15,164,0,255
+chr21	13409934	chr21:13409934:M	GAGAGAGAGAGAGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<22>,<28>	.	.	Motif=GA	GT:AD:DP:PL	0/2:8,0,7:18:171,197,255,0,178,174	0/2:1,0,2:5:58,61,81,0,22,16	1/2:0,4,3:12:197,88,71,116,0,115
+chr21	13425654	chr21:13425654:M	CACACACACACACACACACACACACACACACACACACACAC	<14.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,16,0:27:255,0,188,255,242,255	0/1:15,19,0:39:255,0,255,255,255,255	1/2:0,18,15:36:255,255,255,255,0,255
+chr21	13431318	chr21:13431318:M	AAAAGAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:18:87,0,96	0/1:12,7:19:58,0,140	1/1:1,19:21:255,44,0
+chr21	13431490	chr21:13431490:M	AGAAAAAAAAAGAAAAGAAA	<4.2>	.	.	Motif=AGAAA	GT:AD:DP:PL	0/0:34,9:43:0,30,197	0/0:31,5:36:0,45,205	0/1:22,14:36:25,0,88
+chr21	13432655	chr21:13432655:M	AGAGAGAGAGAGAGAGAGAGAGAGAGA	<9.5>,<12.5>	.	.	Motif=AG	GT:AD:DP:PL	0/2:17,0,11:31:86,173,255,0,255,181	0/2:10,0,13:28:125,193,255,0,144,75	1/2:1,14,22:48:255,197,255,215,0,255
+chr21	13434213	chr21:13434213:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,2,9:28:66,73,255,0,191,144	0/2:12,0,10:27:56,107,255,0,208,140	1/2:3,26,16:46:255,124,124,255,0,219
+chr21	13435224	chr21:13435224:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,15,1:45:226,0,255,168,255,255	0/1:38,13,3:56:147,0,255,118,255,255	0/2:26,13,24:64:255,80,255,0,170,158
+chr21	13438466	chr21:13438466:M	AAAAAAAAAAAAAAAA	<13>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,6:20:38,95,255,0,176,121	0/2:10,0,5:18:40,90,255,0,145,96	0/1:14,8,6:29:147,0,255,125,118,255
+chr21	13440249	chr21:13440249:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,1:39:0,96,255	0/0:34,1:35:0,85,255	0/1:12,12:24:148,0,149
+chr21	13444327	chr21:13444327:M	AACAACAACAACAACAACAA	<6.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:8,7:18:28,0,28	0/1:20,17:41:70,0,73	0/1:17,11:29:27,0,75
+chr21	13448839	chr21:13448839:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,3:18:12,0,195	0/0:21,3:25:0,21,255	0/1:10,9:22:134,0,114
+chr21	13449197	chr21:13449197:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,5:10:54,69,195,0,83,55	0/2:3,1,7:11:90,77,148,0,32,17	0/1:4,3,1:8:59,0,87,34,50,77
+chr21	13449686	chr21:13449686:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,2:8:13,0,70,0,25,70	0/2:7,0,4:12:37,68,201,0,99,87	0/1:2,6,0:8:82,0,12,104,30,182
+chr21	13458146	chr21:13458146:M	ATAATAATAATAATAATAATAATAATGATAA	<11.3>	.	.	Motif=ATA	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/1:12,10:22:115,0,151	0/0:26,0:26:0,77,255
+chr21	13461891	chr21:13461891:M	AAAAAAAAAAAAGAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,1:33:0,80,255	0/0:36,2:40:0,82,255	0/1:18,8:31:41,0,198
+chr21	13467543	chr21:13467543:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:39:0,117,255	0/1:32,12:46:191,0,255	0/0:45,0:47:0,138,255
+chr21	13468039	chr21:13468039:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/0:31,2:34:0,65,255	0/1:17,14:33:152,0,217
+chr21	13468346	chr21:13468346:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,51,255	0/1:5,4:10:77,0,104	0/0:11,0:11:0,33,255
+chr21	13472158	chr21:13472158:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/0:30,0:30:0,90,255	0/1:20,24:45:255,0,255
+chr21	13474558	chr21:13474558:M	AAAAAAAAAAAAAAA	<16>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/3:11,0,1,5:17:109,132,255,72,255,255,0,197,255,255	1/2:1,9,9,1:20:255,146,109,114,0,111,255,114,148,255	0/0:22,1,1,0:28:0,50,255,49,255,255,70,255,255,255
+chr21	13476731	chr21:13476731:M	TTTTTTCTTTTTCTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:27:0,73,255	0/1:12,15:28:180,0,138	0/0:32,1:33:0,79,255
+chr21	13478586	chr21:13478586:M	CACACACACACACACACACACACACACACACA	<17>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,13:32:88,0,135	1/1:2,31:35:255,61,0	0/0:22,1:28:0,62,255
+chr21	13481274	chr21:13481274:M	TGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:15,0,5,0:21:98,133,255,0,255,255,141,255,255,255	2/3:0,0,5,4:12:255,255,246,109,104,84,158,135,0,141	0/1:18,10,0,0:31:211,0,255,255,255,255,255,255,255,255
+chr21	13482544	chr21:13482544:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,0,15:30:186,231,255,0,255,178	1/2:0,23,14:41:255,204,124,255,0,255	0/0:32,0,4:36:0,96,255,35,255,255
+chr21	13485069	chr21:13485069:M	AAGAAGAAGAAGAAGAAG	<8>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:11,10:22:130,0,149	0/1:15,10:28:109,0,232	0/1:29,14:48:143,0,255
+chr21	13487504	chr21:13487504:M	AAAAGAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,1:47:0,118,255	0/1:28,15:44:120,0,255	0/0:42,1:46:0,114,255
+chr21	13489516	chr21:13489516:M	ACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,20:33:212,0,104	0/1:11,18:29:184,0,80	0/1:17,18:36:169,0,162
+chr21	13490554	chr21:13490554:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<8.5>,<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,2,12,2:20:255,209,184,33,13,0,241,146,17,216	1/2:0,6,7,0:13:255,113,75,97,0,59,255,93,96,244	2/3:0,0,4,3:7:175,134,122,48,47,28,65,54,0,45
+chr21	13490611	chr21:13490611:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:21:123,24,0	0/1:3,6:10:34,0,13	1/1:0,0:6:34,10,0
+chr21	13492464	chr21:13492464:M	ACACACACACACACACACACACACACACACACAGAGAGACACACACA	<24.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,11,1:22:116,0,55,112,52,255	2/2:0,0,6:8:203,203,203,24,24,0	0/1:22,9,0:34:38,0,255,138,255,255
+chr21	13499795	chr21:13499795:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/1:15,16:31:194,0,175	0/1:19,15:36:190,0,243
+chr21	13501779	chr21:13501779:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:15,8:25:64,0,202	0/0:22,1:25:0,55,255
+chr21	13502393	chr21:13502393:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:1,16,77,0,53,50	1/2:1,2,3:6:47,33,66,17,0,40	0/1:3,3,0:7:38,0,27,56,39,123
+chr21	13506423	chr21:13506423:M	TATACATATACATACTTACATATGTATAATACATATACATA	<2.3>	.	.	Motif=TATACA	GT:AD:DP:PL	0/1:19,11:30:193,0,255	0/1:12,5:17:74,0,250	0/1:28,4:32:3,0,255
+chr21	13507637	chr21:13507637:M	CTTTCTTTCTTTC	<2.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:17,16:33:212,0,232	0/1:20,20:40:246,0,245	0/0:40,0:40:0,118,255
+chr21	13510435	chr21:13510435:M	TATATATATATATATATATATATATAT	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,22:30:185,5,0	1/1:1,9:12:112,21,0	1/1:4,20:26:166,3,0
+chr21	13518477	chr21:13518477:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:8:0,21,182	1/1:0,8:10:231,24,0	0/1:3,5:10:136,0,57
+chr21	13524301	chr21:13524301:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:6,0,72	1/1:0,15:18:198,39,0	0/1:7,6:17:55,0,54
+chr21	13535924	chr21:13535924:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,4:45:0,58,255	0/1:15,18:35:223,0,170	0/0:34,1:36:0,87,255
+chr21	13555888	chr21:13555888:M	TATATATATATATATATATATATATATATA	<12>,<19>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,0,3:10:64,85,255,0,195,186	1/1:0,3,0:3:94,9,0,94,9,94	0/0:5,0,0:7:0,17,158,15,156,155
+chr21	13566921	chr21:13566921:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:24,0,26:51:255,255,255,0,255,255	1/2:1,24,21:47:255,255,255,255,0,255	0/0:40,0,1:41:0,121,255,102,255,255
+chr21	13585167	chr21:13585167:M	AAAAAAAAAAAAAAAAGAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:21:145,0,255	0/1:8,5:14:98,0,185	0/0:13,0:17:0,47,255
+chr21	13595695	chr21:13595695:M	TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTATTTT	<9.8>,<10.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	2/2:0,0,8:9:155,155,155,24,23,0	1/1:0,3,0:5:92,10,0,65,10,57	2/2:0,0,6:6:113,113,113,18,18,0
+chr21	13597040	chr21:13597040:M	CACACAGACACACACACACACACACACACACACACACACACACACA	<26>	.	.	Motif=CA	GT:AD:DP:PL	0/0:6,0:6:0,18,180	1/1:0,6:8:189,21,0	0/0:4,0:6:0,18,148
+chr21	13597248	chr21:13597248:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:8:0,0,68	1/1:0,0:1:2,1,0	0/1:7,3:10:21,0,88
+chr21	13602769	chr21:13602769:M	AAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAA	<34>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:7:90,29,75,56,0,60	2/2:0,0,1:1:14,17,26,3,3,0	1/2:1,1,3:5:41,29,78,8,0,12
+chr21	13603076	chr21:13603076:M	ACACACCACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,4:13:81,0,221	0/1:0,5:7:127,0,19	0/1:20,7:30:140,0,255
+chr21	13615824	chr21:13615824:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:22:84,0,185	0/0:22,1:24:0,53,255	0/1:6,13:21:185,0,57
+chr21	13616139	chr21:13616139:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:12,0,10:26:248,255,255,0,255,255	2/2:0,0,17:20:255,255,255,56,58,0	0/1:13,12,0:27:255,0,255,255,255,255
+chr21	13619420	chr21:13619420:M	AAAAAATAAAAATAAAAAACAAAACAAAAACAAAACAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	.	1/1:0,8:8:221,24,0
+chr21	13627446	chr21:13627446:M	AAAAAAACAAAAAAAAAAAAGAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:12,0,178	1/1:0,9:9:159,26,0	0/0:17,2:19:0,20,255
+chr21	13678394	chr21:13678394:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:205,35,0	.	0/1:1,4:5:55,0,2
+chr21	13711753	chr21:13711753:M	ATGCTTATGCTTAT	<1.7>	.	.	Motif=ATGCTT	GT:AD:DP:PL	0/0:11,1:12:0,8,255	0/1:8,3:11:52,0,186	0/0:11,0:11:0,33,255
+chr21	13782884	chr21:13782884:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.2>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:10,12:22:161,0,124	0/0:15,0:16:0,44,255	0/1:10,15:25:202,0,110
+chr21	13795297	chr21:13795297:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:91,9,0	0/0:1,0:2:0,3,28	0/1:1,1:3:20,0,23
+chr21	13809190	chr21:13809190:M	ATTATTATTATTATTATT	<6.3>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,16:37:9,0,27	0/0:38,3:45:0,60,166	1/1:0,26:33:88,28,0
+chr21	13809206	chr21:13809206:M	TTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,12:33:255,251,255,242,0,255	0/1:13,16,0:32:255,0,255,255,255,255	1/2:0,4,22:29:255,255,255,97,0,32
+chr21	13809599	chr21:13809599:M	TTTTTTTTTTGTCCTTTTTTTTTTTTTTTTTTT	<12>,<31>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,7:10:175,150,171,33,0,12	0/2:2,2,2:8:34,0,63,0,2,35	1/2:0,3,8:12:232,170,187,73,0,49
+chr21	13818174	chr21:13818174:M	TTTTTTTTTTTTCTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,20:37:255,255,255,255,0,255	1/2:1,17,20:39:255,255,255,255,0,255	2/2:1,0,38:39:255,255,255,97,117,0
+chr21	13827697	chr21:13827697:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,25:36:255,0,101	0/0:37,3:40:0,64,255	0/1:12,10:24:114,0,169
+chr21	13828862	chr21:13828862:M	TATATATATTATTAAATATATAT	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/0:31,3:34:0,23,255	0/1:14,5:19:72,0,255	0/0:30,2:32:0,43,255
+chr21	13829683	chr21:13829683:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:39:230,0,255	0/0:53,0:53:0,156,255	0/1:15,12:27:139,0,195
+chr21	13830168	chr21:13830168:M	ACACACACACACACCCATACTCACCCACCTACACACAGAAACACACCCACACACACAC	<10>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,7:23:118,0,255	0/1:22,5:27:53,0,255	0/1:18,6:24:86,0,255
+chr21	13836136	chr21:13836136:M	TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,11:22:252,0,187	0/0:9,0:10:0,30,255	0/1:9,5:15:109,0,201
+chr21	13873837	chr21:13873837:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,10:33:91,0,255	0/0:39,1:45:0,113,255	0/1:12,18:31:216,0,108
+chr21	13909190	chr21:13909190:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:14:0,8,158	0/1:8,4:14:23,0,107	0/0:20,3:24:0,12,255
+chr21	13912347	chr21:13912347:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:26,0,152	0/1:8,11:21:136,0,85	0/0:21,1:23:0,50,255
+chr21	13912519	chr21:13912519:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,12:25:182,0,87	0/1:6,8:17:109,0,62	0/1:7,3:10:23,0,92
+chr21	13914343	chr21:13914343:M	TTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,6:8:135,0,12	0/1:5,3:9:64,0,108	0/1:5,2:7:33,0,112
+chr21	13916535	chr21:13916535:M	AAAAAAAAAAAAAAAA	<15>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,17,5:27:255,109,68,255,0,255	1/2:0,8,8:20:255,197,179,147,0,213	1/2:0,16,5:24:255,129,88,255,0,255
+chr21	13925531	chr21:13925531:M	TTTTTTTTTTTGTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:18:128,0,74	0/1:11,10:22:107,0,133	0/1:11,9:20:101,0,135
+chr21	13934234	chr21:13934234:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,12:30:140,0,254	0/1:21,24:45:255,0,244	0/1:30,29:59:255,0,255
+chr21	13939365	chr21:13939365:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,20:48:255,0,255	0/1:14,19:35:255,0,255	0/1:23,22:46:255,0,255
+chr21	13940759	chr21:13940759:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,11:33:108,0,255	0/1:19,17:36:192,0,228	0/1:18,19:37:236,0,217
+chr21	13941491	chr21:13941491:M	TTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,10:20:255,250,211,191,0,150	1/2:0,13,3:26:255,78,26,255,0,255	1/2:0,12,14:29:255,255,255,255,0,251
+chr21	13943764	chr21:13943764:M	TTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,6:9:189,21,0	1/1:0,12:14:255,37,0
+chr21	13944986	chr21:13944986:M	AAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,16:37:255,0,255	0/1:13,12:26:255,0,255	0/1:8,21:34:255,0,130
+chr21	13963526	chr21:13963526:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,27:38:255,0,87	0/1:17,26:43:255,0,178	0/1:18,21:40:255,0,225
+chr21	13966218	chr21:13966218:M	TGTATGTGTATATGTGCATGTGTCTATGTGTATGTGTAT	<7.5>	.	.	Motif=TGTATG	GT:AD:DP:PL	0/1:19,18:37:231,0,252	0/1:15,4:19:15,0,212	0/1:20,11:31:111,0,255
+chr21	13973878	chr21:13973878:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<20>	.	.	Motif=TG	GT:AD:DP:PL	0/1:13,14,0:31:255,0,255,255,255,255	0/2:10,0,6:17:52,102,255,0,179,133	0/1:11,18,0:32:255,0,255,255,208,255
+chr21	13981522	chr21:13981522:M	CCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,1:1:28,3,0	.	1/1:0,3:4:100,12,0
+chr21	13998484	chr21:13998484:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,34:38:255,255,255,97,72,0	1/2:1,31,15:47:255,235,118,255,0,255	1/2:2,21,23:47:255,255,255,255,0,254
+chr21	13999108	chr21:13999108:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1:34:0,83,255	0/1:27,10:38:41,0,255	0/0:29,1:33:0,79,255
+chr21	14000638	chr21:14000638:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:29:255,77,0	1/1:0,20:26:255,65,0	1/1:0,17:20:255,56,0
+chr21	14003480	chr21:14003480:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:18:255,34,0	1/1:1,30:33:255,79,0	1/1:1,31:32:255,76,0
+chr21	14019889	chr21:14019889:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:245,0,255	1/1:0,37:37:255,109,0	0/0:38,1:41:0,102,255
+chr21	14025002	chr21:14025002:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:34:172,0,245	1/1:3,32:36:255,52,0	0/0:38,0:40:0,115,255
+chr21	14029013	chr21:14029013:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:24:150,0,107	1/1:5,32:38:255,28,0	0/0:22,4:30:0,3,255
+chr21	14031160	chr21:14031160:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:8,0,4:14:84,92,255,0,211,200	1/2:0,5,2:8:171,44,29,112,0,102	0/0:9,0,0:9:0,27,250,27,251,252
+chr21	14047139	chr21:14047139:M	GAGTGGAGTGGAGTGGAGTGGAGAGTGGAGTGGAGTGGAGCGGAGCGGAGCAGAGTGGAGTGGAGTGGA	<14.8>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:4,5:9:65,0,47	0/0:15,0:15:0,44,255	0/1:2,7:9:100,0,10
+chr21	14058640	chr21:14058640:M	GGCCAGGGCCAGGGCACAGGCAGGGGCAGGGCCTGGATAAGGGCAGGGTCAGGGATATGGCAGGACCAGGGTCCAGGCCAGGGCCAGGGTCCAGG	<3.3>	.	.	Motif=GGCCAG	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,29:29:255,87,0	1/1:0,32:32:255,96,0
+chr21	14060241	chr21:14060241:M	CCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	0/1:3,1:5:4,0,53	0/0:6,0:6:0,18,106	0/1:1,4:5:58,0,4
+chr21	14062713	chr21:14062713:M	GGGGGGGGGGG	<10>,<12>	.	.	Motif=G	GT:AD:DP:PL	1/2:0,1,1:2:30,17,23,17,0,23	1/1:0,6,0:6:102,18,0,118,18,172	0/2:2,0,4:7:52,69,132,0,29,17
+chr21	14065631	chr21:14065631:M	TATATATATATATATATATATATATATATATATATATATATATAT	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,3:5:155,15,0	1/1:0,1:3:27,3,0	1/1:0,2:2:55,6,0
+chr21	14079985	chr21:14079985:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:27:167,0,175	0/0:36,2:38:0,76,255	0/1:20,21:42:255,0,244
+chr21	14081510	chr21:14081510:M	TTATTATTATTATTA	<6>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:33,6:39:0,21,255	0/1:8,5:13:36,0,80	0/0:30,0:30:0,86,255
+chr21	14081523	chr21:14081523:M	TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA	<12.7>,<13.7>	.	.	Motif=TAG	GT:AD:DP:PL	0/0:31,0,0:34:0,102,255,102,255,255	0/2:7,1,14:26:255,172,255,0,198,184	0/1:24,14,0:38:231,0,255,185,255,255
+chr21	14085976	chr21:14085976:M	TTTTTTTTTTTTTTCTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:22:84,0,175	0/0:30,0:31:0,88,255	0/1:13,13:28:161,0,161
+chr21	14088389	chr21:14088389:M	AATATAATTAAAAATATAATATATAATTATAAATATAGTATATAATTATAATTATA	<7.3>	.	.	Motif=AATATA	GT:AD:DP:PL	1/1:0,5:5:131,15,0	1/1:0,1:1:26,3,0	1/1:0,0:1:3,1,0
+chr21	14094056	chr21:14094056:M	AATAAATAAATAAATAAATAAATAAATAAATAAAT	<6.8>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,14:18:255,50,0	1/1:0,7:10:174,26,0	1/1:0,0:4:9,3,0
+chr21	14094088	chr21:14094088:M	AATTAATTAATTAATTTAATT	<2.2>,<7.2>,<8.2>	.	.	Motif=AATT	GT:AD:DP:PL	2/3:0,0,13,14:27:255,255,255,230,230,151,213,214,0,135	1/2:0,2,8,0:10:255,206,210,76,0,52,200,125,75,178	1/3:0,7,0,8:15:255,215,194,255,128,255,255,0,255,238
+chr21	14095297	chr21:14095297:M	TTTTTTTGTTTGTTTTTTGCTTTTTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,0:21:45,0,250	0/1:3,4:11:103,0,68	0/1:1,2:8:77,0,15
+chr21	14097272	chr21:14097272:M	TTTTTTATTTTTATTTTTATTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:29:200,0,183	0/1:10,9:19:106,0,124	1/1:0,21:21:255,62,0
+chr21	14100420	chr21:14100420:M	AAAAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20,0:34:255,0,255,255,255,255	0/2:12,3,15:31:255,206,255,0,255,255	1/2:0,16,16:33:255,255,190,255,0,202
+chr21	14100728	chr21:14100728:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/1:12,10:24:71,0,110	0/0:12,0:14:0,37,169	1/1:3,17:20:188,16,0
+chr21	14102653	chr21:14102653:M	AAAAAAAGAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:30:117,0,255	0/1:16,11:27:115,0,205	1/1:0,36:36:255,106,0
+chr21	14106744	chr21:14106744:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,16,10:27:255,166,213,255,0,255	0/1:11,19,0:30:247,0,106,255,163,255	0/2:12,0,11:23:132,197,255,0,183,150
+chr21	14107600	chr21:14107600:M	ACTCACTCACT	<1.8>	.	.	Motif=ACTC	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/1:9,19:28:255,0,81	0/1:23,25:48:255,0,255
+chr21	14110338	chr21:14110338:M	ATTTTTTTATTTATTTGTTTATTT	<5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:29,17:46:191,0,255	0/1:16,17:33:210,0,191	0/0:38,0:38:0,112,255
+chr21	14111844	chr21:14111844:M	TTTTGTTTTGTTTT	<2.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:26,17:43:255,0,255	1/1:0,39:39:255,117,0	0/1:25,23:48:255,0,255
+chr21	14114178	chr21:14114178:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,1,15:26:202,242,255,0,113,103	1/2:1,13,11:25:255,173,240,207,0,255	0/1:12,9,1:22:98,0,162,142,164,255
+chr21	14116010	chr21:14116010:M	GTGTGTGGGAGTGTGTGGGTGTGTGTG	<8.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:15,15:30:255,0,255	0/1:14,17:31:255,0,255
+chr21	14129799	chr21:14129799:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:3:26,7,0	1/1:0,3:5:46,12,0	1/1:0,0:2:14,5,0
+chr21	14129810	chr21:14129810:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:42:255,0,255	0/0:30,0:31:0,90,255	0/1:20,28:51:255,0,255
+chr21	14138203	chr21:14138203:M	AAAAATAAAAATAAA	<2.7>	.	.	Motif=AAAAAT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:19,12:31:214,0,255	0/1:32,20:52:255,0,255
+chr21	14141387	chr21:14141387:M	TTTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,24,18:42:255,255,220,255,0,255	0/1:17,17,0:36:255,0,255,255,255,255	0/2:22,2,23:50:255,255,255,0,255,255
+chr21	14141628	chr21:14141628:M	TTGTTGTTGTTTTGTTGT	<5>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,44:44:255,129,0	0/1:20,9:29:69,0,255	0/1:19,13:32:134,0,239
+chr21	14152072	chr21:14152072:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:10,11:21:150,0,131	0/0:6,0:6:0,18,109	0/1:6,7:13:93,0,74
+chr21	14163093	chr21:14163093:M	TATATATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,48:49:255,145,0	0/1:16,21:38:255,0,195	0/1:32,28:60:255,0,255
+chr21	14174541	chr21:14174541:M	TTTATTTTATTTTATTTTATTTTATTTT	<6.6>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:14,14:28:174,0,174	0/1:14,13:27:167,0,186
+chr21	14176176	chr21:14176176:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:20:105,0,141	1/1:0,14:14:242,41,0	0/1:12,7:20:76,0,155
+chr21	14176722	chr21:14176722:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:50:0,150,255	0/1:13,12:26:255,0,255	0/1:21,15:40:255,0,255
+chr21	14185883	chr21:14185883:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:45:0,134,255	0/1:17,18:36:255,0,255	0/1:18,13:33:255,0,255
+chr21	14191377	chr21:14191377:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:10:82,0,27	0/1:4,4:11:65,0,37	0/1:8,8:17:100,0,91
+chr21	14196127	chr21:14196127:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,18:19:255,55,0	1/1:0,27:27:255,79,0
+chr21	14196156	chr21:14196156:M	AAAAAAAAAAAACAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,1,3:25:17,36,255,0,255,255	1/2:0,7,4:16:255,76,34,152,0,117	0/1:23,6,1:31:97,0,255,96,255,255
+chr21	14197027	chr21:14197027:M	ACACACACACACACACACACACATACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:8,15:23:201,0,75	0/1:13,21:34:255,0,140
+chr21	14202992	chr21:14202992:M	AAACAAACAAAC	<2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:47,0:50:0,142,255	0/1:16,18:35:230,0,202	0/1:27,25:55:255,0,255
+chr21	14203857	chr21:14203857:M	AGAAAGAAAGAAA	<5.2>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:21,15:37:255,0,255	1/1:0,40:40:255,120,0	0/1:17,19:36:255,0,255
+chr21	14213003	chr21:14213003:M	ATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:11,8:19:203,0,254	0/1:28,12:40:255,0,255
+chr21	14213292	chr21:14213292:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	<12.8>,<13.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:0,4,7:11:247,130,100,64,0,43	2/2:0,0,15:16:255,255,255,45,44,0	1/2:0,9,7:16:255,126,82,140,0,119
+chr21	14214810	chr21:14214810:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:41:0,102,255	0/1:23,26:51:255,0,255	0/1:22,19:41:228,0,255
+chr21	14226620	chr21:14226620:M	AAAAAAAAAAAAAAAACAAACAAAAA	<25>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3,0:14:13,0,158,53,167,242	0/1:9,14,1:25:178,0,91,227,112,255	0/2:9,2,8:20:94,112,255,0,99,123
+chr21	14232691	chr21:14232691:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:33:0,77,255	0/1:12,13:27:152,0,136	0/0:27,1:33:0,75,255
+chr21	14235342	chr21:14235342:M	AAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1,0:45:0,114,255,135,255,255	0/2:20,0,7:27:119,178,255,0,255,255	0/1:24,14,0:39:150,0,255,255,255,255
+chr21	14235352	chr21:14235352:M	AGAGAGAGAGAGAGAGA	<9>	.	.	Motif=AG	GT:AD:DP:PL	0/0:40,0:41:0,79,226	0/0:33,0:34:0,66,187	0/1:20,14:36:14,0,46
+chr21	14243225	chr21:14243225:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/2:7,0,7:15:180,200,255,0,190,170	0/1:6,5,0:12:108,0,153,133,173,255	2/2:0,0,9:10:255,255,255,27,27,0
+chr21	14243744	chr21:14243744:M	GAAAGAAAGAGAGAAA	<3.5>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:21,17:38:255,0,255	0/0:32,0:32:0,96,255	1/1:0,38:38:255,114,0
+chr21	14250797	chr21:14250797:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:21:0,43,255	0/0:15,2:20:0,23,250	0/1:12,10:24:113,0,152
+chr21	14253390	chr21:14253390:M	TAAATAAATAAA	<2.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/0:37,0:37:0,106,255	0/0:50,0:50:0,144,255	0/1:24,23:51:197,0,249
+chr21	14254070	chr21:14254070:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/0:16,0,1:17:0,48,255,33,255,255	0/2:7,0,3:10:20,41,213,0,112,85	0/1:8,7,0:16:165,0,175,123,130,213
+chr21	14254572	chr21:14254572:M	ATATATATAATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/0:32,0:32:0,94,255	0/1:26,16:42:183,0,255
+chr21	14256500	chr21:14256500:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,3:19:28,0,255	0/0:23,0:23:0,69,255	1/1:0,13:15:255,41,0
+chr21	14257908	chr21:14257908:M	TTTCTTTGTTTCTTTCTTT	<6.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:11,4:17:52,0,226	0/0:12,0:12:0,36,255	1/1:0,15:19:255,31,0
+chr21	14258823	chr21:14258823:M	CAAAACAAAACAAAACAAACAAAA	<5>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/1:9,20:32:66,4,0	0/0:37,0:38:0,76,226	1/1:0,36:38:219,74,0
+chr21	14268220	chr21:14268220:M	ATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:14,20:34:255,0,171	0/1:8,13:21:179,0,84	0/1:21,9:30:84,0,255
+chr21	14270958	chr21:14270958:M	TATATATATATATATATATA	<13>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,8:34:164,0,255	0/0:21,0:26:0,57,255	0/1:1,7:24:239,0,5
+chr21	14270998	chr21:14270998:M	TATATATATATAATATA	<9.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,5,3:28:17,0,165,17,204,255	0/0:31,1,0:32:0,76,255,93,255,255	1/2:0,8,6:14:195,71,33,76,0,58
+chr21	14276705	chr21:14276705:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9,0:9:164,27,0,164,27,164	1/1:0,8,1:9:149,26,0,123,9,120	1/2:1,7,4:12:186,53,36,87,0,100
+chr21	14277463	chr21:14277463:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:38:0,83,255	0/1:20,10:31:82,0,255	0/1:18,6:33:64,0,253
+chr21	14291384	chr21:14291384:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:10:49,0,61	0/0:11,0:12:0,35,198	0/1:7,11:20:165,0,65
+chr21	14291457	chr21:14291457:M	GTGTGTGTGTGTGTGTGTGTGTGT	<8>,<14>,<15>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,20,1,14,0:35:255,255,255,255,245,255,255,0,255,255,255,255,255,255,255	3/4:0,0,2,10,10:22:255,255,255,255,255,255,179,179,142,115,199,201,115,0,141	1/2:0,19,19,0,0:40:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
+chr21	14292535	chr21:14292535:M	TGAATGAATGAATGAATGAATGAA	<7>	.	.	Motif=TGAA	GT:AD:DP:PL	0/1:21,23:44:255,0,255	0/1:12,16:28:208,0,136	0/1:22,18:40:221,0,255
+chr21	14295225	chr21:14295225:M	ACACACACACACATGCACACACACACGCACACACACACACATACACATATATATACACACACACACAC	<35>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,12:12:225,35,0	1/1:1,10:11:159,15,0	1/1:0,12:12:219,35,0
+chr21	14296463	chr21:14296463:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:38:255,92,0	1/1:0,34:36:255,105,0	1/1:1,33:35:255,84,0
+chr21	14297077	chr21:14297077:M	TTTATTTGTTTATTTACTTATTTTTATTTTTTATTTATTTATTATTTATTTATTTATTTATTCATTCATTTATTTATTTATTTATTT	<19.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:4,2:6:39,0,95	1/1:0,1:2:28,3,0	1/1:0,3:3:84,9,0
+chr21	14298756	chr21:14298756:M	ATATATATATATATATAT	<8>,<10.5>,<12>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,0,7,10:22:255,255,255,194,210,153,139,196,0,152	1/3:0,16,0,5:21:255,139,93,255,98,255,248,0,255,255	0/2:10,1,12,0:23:176,224,255,0,131,151,209,255,215,255
+chr21	14303560	chr21:14303560:M	AAAAAAAAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<40>,<44>,<51>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,9,5:14:255,255,255,134,135,108,245,245,0,230	1/3:0,11,0,4:15:255,105,74,255,107,255,255,0,255,255	2/3:0,0,1,5:8:175,177,179,132,134,125,45,45,0,30
+chr21	14304123	chr21:14304123:M	TGTGTGTGTGTGTGTGTGTGTGTGTTGTTTGTTTGTATGTGTG	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:14,0,24:38:255,255,255,0,255,153	0/1:10,11,0:22:255,0,224,255,175,255	0/2:16,0,18:34:231,255,255,0,255,195
+chr21	14312436	chr21:14312436:M	ACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:24,15:40:255,0,255	0/0:38,0:38:0,114,255	0/1:20,14:34:255,0,255
+chr21	14327266	chr21:14327266:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,22:38:255,0,186	0/0:21,2:24:0,35,255	0/1:9,16:26:226,0,88
+chr21	14340482	chr21:14340482:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:38:255,0,221	0/0:40,1:42:0,103,255	0/1:17,14:32:160,0,230
+chr21	14345905	chr21:14345905:M	AAGGAAGGAAGGAAGGAAGGAAGG	<7>	.	.	Motif=AAGG	GT:AD:DP:PL	1/1:2,8:10:76,3,0	0/0:18,2:20:0,31,196	1/1:0,11:11:137,30,0
+chr21	14351353	chr21:14351353:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,16:24:225,0,76	0/0:20,3:24:0,18,255	0/1:12,16:30:220,0,129
+chr21	14351997	chr21:14351997:M	ATATATATATATATATAATATATATATATA	<14>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:2,4:6:55,0,18	1/1:0,23:23:255,68,0
+chr21	14355255	chr21:14355255:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<16>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,7:11:104,0,22	1/1:0,14:14:241,41,0	1/1:0,13:14:239,41,0
+chr21	14366385	chr21:14366385:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:11,10:22:122,0,130	0/0:41,2:44:0,93,255
+chr21	14366686	chr21:14366686:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:23:0,49,255	0/1:9,9:18:102,0,102	0/0:20,1:22:0,46,255
+chr21	14369241	chr21:14369241:M	CCAGCCCAGCC	<2>	.	.	Motif=CCAGC	GT:AD:DP:PL	0/1:14,16:30:255,0,255	0/1:19,17:36:255,0,255	0/0:37,0:37:0,111,255
+chr21	14378625	chr21:14378625:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:36:0,106,255	0/1:17,8:26:147,0,255	0/0:32,0:34:0,101,255
+chr21	14389997	chr21:14389997:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12>,<16>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,24,0,11:36:255,201,234,255,191,255,255,0,255,255	1/2:0,16,16,0:32:255,255,255,255,0,255,255,255,255,255	3/3:0,0,4,24:28:255,255,255,255,255,255,82,84,10,0
+chr21	14391124	chr21:14391124:M	TTTGTTTGTTTGTTTG	<3>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:42,0:44:0,115,255	0/1:25,19:47:232,0,255	0/0:50,0:54:0,127,255
+chr21	14391868	chr21:14391868:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,5:41:0,36,255	0/1:15,6:22:30,0,143	0/0:31,4:35:0,44,255
+chr21	14394492	chr21:14394492:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:15:0,39,255	0/1:9,4:14:76,0,196	0/0:11,0:13:0,36,255
+chr21	14394572	chr21:14394572:M	GGGAGAGGGAGAGAGAGAG	<2.2>	.	.	Motif=GGGAGA	GT:AD:DP:PL	0/1:13,17:30:240,0,161	1/1:0,51:51:255,150,0	0/0:26,0:27:0,77,255
+chr21	14395059	chr21:14395059:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:38:213,0,255	0/1:14,18:36:241,0,151	0/0:42,2:46:0,89,255
+chr21	14396299	chr21:14396299:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,25:55:255,0,255	1/1:0,45:46:255,135,0	0/0:42,3:45:0,78,255
+chr21	14403219	chr21:14403219:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,25:38:255,0,131	0/1:17,13:31:139,0,218	0/0:29,1:30:0,70,255
+chr21	14403381	chr21:14403381:M	TTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTGTATTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:37,0,20	1/1:1,7:8:101,7,0	0/0:14,0:14:0,41,243
+chr21	14405802	chr21:14405802:M	TATTTACTTATTTATTT	<3.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:15,27:42:255,0,255	0/1:31,23:55:255,0,255	0/0:45,0:46:0,135,255
+chr21	14405812	chr21:14405812:M	TTTATTTTTATTTT	<1.7>	.	.	Motif=TTTATT	GT:AD:DP:PL	0/1:16,27:43:255,0,255	0/1:32,25:57:255,0,255	0/0:46,0:46:0,138,255
+chr21	14413530	chr21:14413530:M	TATTTTTATTTTATTTT	<3.5>	.	.	Motif=TATTTT	GT:AD:DP:PL	0/1:18,21:39:255,0,255	0/1:16,18:34:255,0,255	0/0:52,0:52:0,156,255
+chr21	14425316	chr21:14425316:M	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTATTTT	<7.6>,<8.6>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/2:0,17,10:27:255,189,113,255,0,248	1/2:0,10,7:17:255,126,77,179,0,131	0/2:12,0,9:21:196,166,255,0,255,255
+chr21	14429727	chr21:14429727:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:42:255,0,255	0/1:18,10:35:232,0,255	0/1:17,23:41:255,0,255
+chr21	14433765	chr21:14433765:M	ACAAACAAACAAACAAAC	<4.8>	.	.	Motif=ACAA	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,38:38:255,114,0	0/1:18,24:42:255,0,255
+chr21	14436442	chr21:14436442:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:23,3,0	1/1:0,4:4:137,12,0	1/1:0,0:1:22,3,0
+chr21	14436859	chr21:14436859:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,1:2:39,15,12,17,0,12	1/2:0,1,4:5:79,55,52,16,0,2	1/2:1,3,5:9:125,55,71,34,0,26
+chr21	14438576	chr21:14438576:M	AAAAAAAAAAAAAAAAAA	<19>,<21>,<22>,<25>	.	.	Motif=A	GT:AD:DP:PL	2/4:0,0,5,0,7:12:255,255,255,198,198,183,255,255,198,255,148,143,0,89,127	3/4:0,0,1,3,3:8:195,194,193,127,127,116,93,93,76,82,102,101,34,0,90	1/2:0,9,8,0,0:20:255,216,188,150,0,221,255,143,255,255,255,228,255,255,255
+chr21	14449137	chr21:14449137:M	TCTTTCTTTCTTTCTTTCTTT	<7.2>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:11,7:22:120,0,255	0/1:11,6:21:93,0,255	0/0:25,0:27:0,75,255
+chr21	14449155	chr21:14449155:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,5:14:97,0,168	0/1:9,6:18:104,0,200	0/1:13,0:20:1,0,255
+chr21	14451021	chr21:14451021:M	TTCTTCTCCTTCATTCTTCT	<6.3>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:22,19:41:255,0,255	0/1:21,19:40:255,0,255	0/0:43,0:43:0,129,255
+chr21	14452766	chr21:14452766:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,15:21:217,0,21	0/1:15,6:21:41,0,196	0/1:8,13:23:164,0,87
+chr21	14476391	chr21:14476391:M	AGAGAGAAAGAAAGAGAGAGAGAGA	<67.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:17,4:21:0,22,255	0/1:13,8:21:19,0,255	0/0:45,0:45:0,135,255
+chr21	14487330	chr21:14487330:M	TTTATCTTATTTATTTTTTAT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:24,16:44:34,0,126	1/1:0,20:22:158,37,0	0/0:44,0:45:0,106,255
+chr21	14487348	chr21:14487348:M	TATATATATATAT	<7.5>,<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:25,5,13:43:236,233,255,0,255,255	1/2:0,6,15:21:255,255,255,93,0,115	0/0:45,0,0:46:0,131,255,136,255,255
+chr21	14493575	chr21:14493575:M	ACACACACACACACACACACACACACACACACACACACA	<16.5>,<20.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,8,0:19:255,139,189,255,0,255,255,139,255,255	1/3:0,13,2,8:23:255,216,207,255,100,255,255,0,255,255	0/2:8,0,5,1:15:55,96,255,0,147,107,55,255,130,255
+chr21	14499492	chr21:14499492:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,10:34:255,180,95,255,0,255	1/2:0,18,15:34:255,255,159,255,0,223	2/2:0,3,31:36:255,255,255,101,46,0
+chr21	14507839	chr21:14507839:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11,0:24:136,0,173,203,206,255	0/1:19,14,1:37:174,0,240,254,255,255	0/2:19,1,17:39:210,255,255,0,255,247
+chr21	14513502	chr21:14513502:M	TGTGTGTGTTTGTGTGTGCGTGTGTGTGTGTCTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:28,19:47:227,0,255	0/1:8,20:28:255,0,62	0/1:19,12:31:134,0,255
+chr21	14521901	chr21:14521901:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,38:41:255,65,0	1/1:2,33:35:255,68,0	0/1:23,25:50:255,0,255
+chr21	14527761	chr21:14527761:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:21,0,49	0/1:1,4:7:117,0,9	0/1:0,3:4:76,0,5
+chr21	14530317	chr21:14530317:M	AAAAAAAAAAAAAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:7:85,0,15	1/1:0,1:2:32,4,0	0/0:4,0:7:0,21,161
+chr21	14534517	chr21:14534517:M	TTTTTTTCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,2:23:0,31,255	0/0:20,3:23:0,15,255	0/1:19,18:38:217,0,245
+chr21	14541324	chr21:14541324:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,14:37:255,0,255	0/1:14,22:37:255,0,255	0/1:14,17:35:255,0,255
+chr21	14541988	chr21:14541988:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:21,1,17:40:255,255,255,0,255,255	0/2:19,1,18:39:255,255,255,0,255,255	0/1:24,21,2:49:255,0,255,255,255,255
+chr21	14545537	chr21:14545537:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/0:31,1:32:0,76,255	0/1:29,21:50:237,0,255
+chr21	14546670	chr21:14546670:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,27:42:255,0,139	0/1:19,24:48:255,0,214	0/1:22,23:45:255,0,255
+chr21	14549929	chr21:14549929:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:41:0,120,255	0/0:38,0:41:0,119,255	0/1:19,15:35:255,0,255
+chr21	14554683	chr21:14554683:M	TTTTGTTTTCTTTTTCTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:11:23,0,96	0/1:7,5:13:48,0,93	0/1:2,2:6:19,0,39
+chr21	14569129	chr21:14569129:M	TAAAAAAAAAAATAAAAATA	<3.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/1:23,22:45:255,0,255	0/1:21,17:39:255,0,255	0/0:28,2:31:0,43,255
+chr21	14584000	chr21:14584000:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:255,0,255	0/1:18,19:41:255,0,255	1/1:0,29:32:255,95,0
+chr21	14587745	chr21:14587745:M	TTATTTATTTATTTATTTATTTTTTA	<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:20,25:49:255,0,203	0/1:12,6:18:43,0,137	0/0:27,0:28:0,79,255
+chr21	14605808	chr21:14605808:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<11.2>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:23,0:27:0,59,255	0/1:4,4:8:50,0,50	0/0:16,0:16:0,47,255
+chr21	14615314	chr21:14615314:M	AAAAAAGAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,17:36:217,0,255	0/0:61,0:61:0,179,255	1/1:0,39:39:255,115,0
+chr21	14615864	chr21:14615864:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,0:1:0,0,0	0/0:2,0:4:0,6,54	1/1:0,3:4:82,9,0
+chr21	14618651	chr21:14618651:M	TGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15>,<17>,<20>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,2,12:17:211,242,255,169,255,255,71,71,0,34	2/3:1,0,10,13:29:255,255,255,181,255,255,251,250,0,217	1/2:0,15,12,0:33:255,255,243,255,0,255,255,255,255,255
+chr21	14618710	chr21:14618710:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,9:25:73,0,169	0/0:43,0:45:0,127,255	0/0:27,5:33:0,17,255
+chr21	14649773	chr21:14649773:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,11,7:19:255,183,149,189,0,255	1/2:0,10,8:19:255,210,178,168,0,252	1/1:2,27,0:29:255,52,0,255,87,255
+chr21	14653851	chr21:14653851:M	ACACACACACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,58:58:255,174,0	1/1:0,35:35:255,105,0	1/1:0,52:52:255,156,0
+chr21	14660177	chr21:14660177:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,19,9:30:255,182,102,255,0,255	1/2:2,14,11:27:255,157,116,173,0,190	1/1:0,41,1:42:255,123,0,255,106,255
+chr21	14667322	chr21:14667322:M	ATATATATATATATATATATATATATATATATATATATATATATATATAT	<10>,<14>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,13,12:30:255,255,255,255,0,255	1/1:0,13,0:14:255,40,0,255,40,255	2/2:0,0,8:10:255,255,255,30,30,0
+chr21	14671988	chr21:14671988:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:54,0:55:0,162,255	0/1:19,10:30:98,0,247	0/0:40,0:41:0,120,255
+chr21	14672151	chr21:14672151:M	TTTTTTTTTTTTTTTT	<12>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,13:37:255,255,255,255,0,255	1/2:1,14,14:29:255,224,255,255,0,255	2/2:1,0,21:28:255,255,255,63,82,0
+chr21	14683617	chr21:14683617:M	GAAGGAAGGAAGGAAAGAAGAAAGGAAGAAAGGAAGGTAGGAAGGAGGGAAGGAAGGAAGG	<16.2>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:2,6:11:68,4,0	0/0:6,0:7:0,8,58	1/1:0,4:6:68,16,0
+chr21	14683660	chr21:14683660:M	GGAGGGAAGGAAGGAAGGCAGGGAGGGAGGGAGGGAAGGGA	<11.2>	.	.	Motif=GGAG	GT:AD:DP:PL	0/1:12,4:16:14,0,140	0/0:5,1:6:0,3,60	1/1:0,2:3:30,6,0
+chr21	14693109	chr21:14693109:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:35:225,0,206	0/1:12,11:25:122,0,158	0/1:18,11:29:116,0,243
+chr21	14693958	chr21:14693958:M	ACACACACACACACACACACACACACACACACACA	<15.5>,<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22,0,0:23:255,69,0,255,69,255,255,69,255,255	1/2:3,13,7,0:23:255,68,185,255,0,255,255,220,255,255	1/3:0,13,0,9:23:255,255,219,255,242,255,255,0,255,255
+chr21	14701868	chr21:14701868:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,21:41:255,0,244	0/0:29,0:29:0,85,255	1/1:2,42:45:255,96,0
+chr21	14702524	chr21:14702524:M	TTTTTTTGTTTTTTGTTTTTTTTTGTATTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:36:255,105,0	0/1:18,16:34:184,0,220	0/1:12,20:32:255,0,126
+chr21	14706667	chr21:14706667:M	GAATTAATGAATGAATGAAT	<6>	.	.	Motif=GAAT	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/0:29,0:29:0,85,255	0/1:24,17:41:197,0,255
+chr21	14710598	chr21:14710598:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:11:5,0,131	0/1:8,2:12:3,0,120	0/1:4,5:11:62,0,56
+chr21	14717701	chr21:14717701:M	AAAGAAGAAAGAAAGAAAGAAA	<6.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:56,0:56:0,164,255	0/1:15,15:33:183,0,199
+chr21	14718249	chr21:14718249:M	AAACAAACAAACAAACAAACAAACA	<8.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:55,0:55:0,165,255	0/0:33,0:33:0,99,255	0/1:15,18:33:255,0,255
+chr21	14724402	chr21:14724402:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:5:0,15,84	0/1:3,3:9:27,0,47	0/0:10,0:11:0,32,181
+chr21	14731524	chr21:14731524:M	TTTTCTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23,1:25:255,69,0,255,53,255	1/2:1,4,11:17:237,140,152,51,0,23	1/2:0,11,3:14:255,45,12,190,0,153
+chr21	14732360	chr21:14732360:M	TTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:99,17,0	1/1:0,6:10:127,24,0	1/1:0,8:10:164,29,0
+chr21	14733281	chr21:14733281:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,3:6:106,46,30,39,0,30	0/2:2,1,1:5:19,3,22,0,17,41	1/1:1,5,0:6:63,2,0,66,17,89
+chr21	14734369	chr21:14734369:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:41:255,119,0	1/1:1,39:43:255,108,0	1/1:0,33:34:255,99,0
+chr21	14740792	chr21:14740792:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:1,47:48:255,123,0	1/1:1,51:52:255,135,0
+chr21	14744410	chr21:14744410:M	AAAAAAACAAAACAAAACAAAACAAAACAAAACAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:13,21:34:255,0,255	0/1:13,9:22:174,0,255
+chr21	14751721	chr21:14751721:M	AAAGGAAAAAAAAGGAGAGGAGAGAACAGGAAAGGAGAGAAGAGGAGAAGAAAGGAAAGGAA	<2.4>,<10.4>	.	.	Motif=AAAGG	GT:AD:DP:PL	0/2:13,4,8:28:108,59,255,0,161,215	0/1:5,8,1:17:178,0,159,184,140,255	0/1:8,8,1:32:155,0,255,184,255,255
+chr21	14753289	chr21:14753289:M	AATTGAATTGA	<2>	.	.	Motif=AATTG	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:23,22:45:255,0,255	0/1:22,33:55:255,0,255
+chr21	14757527	chr21:14757527:M	ACACGCACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,13:34:255,0,255	1/1:0,30:30:255,90,0	0/1:28,13:42:255,0,255
+chr21	14760579	chr21:14760579:M	AAATAAATAAATAAAAAAAT	<4.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:20,14:34:218,0,255	0/1:16,8:24:110,0,255
+chr21	14765576	chr21:14765576:M	ACACACACACACACACACACACACACACACACACA	<14.5>,<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,2,27,0:30:255,255,255,89,48,0,255,255,89,255	2/3:0,3,18,11:34:255,255,255,255,255,255,255,255,0,255	1/2:0,15,7,0:24:255,126,57,255,0,225,255,127,255,255
+chr21	14768444	chr21:14768444:M	ACACACACACACACACACACACACA	<15.5>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,13,0:29:255,0,255,240,255,255	1/2:0,11,10:21:255,176,115,193,0,133	0/0:31,0,0:33:0,99,255,99,255,255
+chr21	14785448	chr21:14785448:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:1,31:33:255,79,0	0/1:18,25:44:255,0,209
+chr21	14788176	chr21:14788176:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,16:20:230,0,13	0/1:4,7:14:83,0,52	0/1:10,9:19:103,0,121
+chr21	14789973	chr21:14789973:M	TATATATATATATATATATATAAAAAATATATATA	<20.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,8,3:12:255,85,56,219,0,203	1/1:0,2,0:3:70,9,0,69,9,69	0/2:5,0,5:10:121,133,255,0,136,122
+chr21	14790818	chr21:14790818:M	TTTTTTTTCTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,21:22:255,64,0	0/1:9,18:29:255,0,81
+chr21	14795164	chr21:14795164:M	AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA	<12.7>,<14.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:5,16,0:21:255,0,92,255,139,255	1/1:0,7,0:9:247,27,0,221,21,211	0/2:7,0,5:12:118,139,255,0,193,175
+chr21	14797770	chr21:14797770:M	AAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:16:255,44,0	1/1:0,17:20:255,56,0	0/1:2,13:16:255,0,7
+chr21	14820939	chr21:14820939:M	AAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,3:4:96,12,0	0/1:5,2:9:43,0,132
+chr21	14825456	chr21:14825456:M	AAAAAAAAAATAAAAATAAAAGAAAAATAAACAAGAAAAAAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,17:18:255,50,0	0/1:10,14:24:183,0,111
+chr21	14836431	chr21:14836431:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,18:24:255,0,4	0/1:5,18:26:255,0,12	0/1:23,10:37:92,0,255
+chr21	14863039	chr21:14863039:M	AAAAAAAATAAAAATAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:11,17:28:226,0,117	0/1:24,15:39:166,0,255
+chr21	14871742	chr21:14871742:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,6:16:139,0,156	0/0:10,0:12:0,33,255	0/1:10,6:16:116,0,232
+chr21	14872982	chr21:14872982:M	AAAAAAAAAAAACAAGAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:11,12:23:143,0,125	0/0:26,1:28:0,62,255
+chr21	14883019	chr21:14883019:M	AAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,11,63	1/1:0,4:6:78,15,0	0/0:9,0:9:0,26,152
+chr21	14885045	chr21:14885045:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,15:19:255,56,0	1/1:0,9:9:239,27,0
+chr21	14892865	chr21:14892865:M	ATATATATATATATATA	<9>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,7:12:148,108,88,18,0,38	2/2:0,0,0:1:0,0,0,0,0,0	1/2:1,2,8:11:162,123,105,5,0,16
+chr21	14893828	chr21:14893828:M	GTGTGTGTGTGTATGTATGTGTGTGTGTGTGTGTGTG	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:22,0:22:0,66,255	0/1:19,12:33:251,0,255
+chr21	14897623	chr21:14897623:M	ATATATATATAT	<5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,23:38:255,0,178	1/1:0,48:48:255,142,0	0/0:48,0:48:0,142,255
+chr21	14899220	chr21:14899220:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,11:29:250,0,255	1/1:0,13:17:255,39,0	0/0:28,0:31:0,90,255
+chr21	14946845	chr21:14946845:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<10.8>,<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/3:0,0,7,4:11:255,245,225,78,77,46,136,117,0,105	1/2:0,8,8,0:16:255,145,100,124,0,100,255,124,145,255	1/3:1,16,0,5:22:255,119,86,255,93,255,255,0,255,255
+chr21	14948325	chr21:14948325:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,13,0:22:255,0,164,239,141,255	0/2:10,2,10:22:128,110,255,0,136,108	1/2:0,18,7:27:255,104,47,255,0,254
+chr21	14956663	chr21:14956663:M	AAAAAGAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:25:255,53,0	0/1:11,10:22:100,0,125	0/1:16,18:36:198,0,185
+chr21	14960673	chr21:14960673:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,16:38:196,0,255	0/1:17,16:36:198,0,205	0/0:31,2:35:0,65,255
+chr21	14961996	chr21:14961996:M	ATATATATATATATACATATTATATATATATATATATATATATATATAAAATATATA	<24.5>,<25.5>,<26.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,9,0:18:255,165,113,165,0,113,255,140,164,255	1/1:0,2,0,0:2:62,6,0,41,6,35,61,6,40,59	2/3:0,0,2,3:5:135,115,110,53,53,39,36,30,0,21
+chr21	14964173	chr21:14964173:M	CTTTTTTTTTTCTTTTT	<2.7>	.	.	Motif=CTTTTT	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,48:48:255,144,0	1/1:0,40:40:255,120,0
+chr21	14973679	chr21:14973679:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,16:25:223,0,94	1/1:1,13:20:187,8,0	0/1:12,14:29:183,0,145
+chr21	14973844	chr21:14973844:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13,0:14:219,23,0,222,41,247	0/1:2,8,0:10:108,0,5,114,34,166	1/2:1,6,5:13:197,70,54,72,0,83
+chr21	14975627	chr21:14975627:M	AAAAAAAAAAAAAAAAAA	<13>,<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,6,3:17:255,156,166,180,0,162,239,51,135,214	2/3:0,0,7,7:17:255,255,255,97,116,68,143,142,0,102	1/3:2,3,0,14:19:233,203,255,239,255,255,40,0,74,28
+chr21	14975659	chr21:14975659:M	GAGAGAGAGAGAGA	<5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:19,13:32:228,0,255	0/0:34,0:34:0,102,255	0/1:18,13:31:243,0,255
+chr21	14975670	chr21:14975670:M	AGAAAGAAAGAAAG	<2.5>	.	.	Motif=AGAA	GT:AD:DP:PL	0/0:14,2:16:0,18,165	0/1:5,3:8:18,0,44	0/0:29,1:30:0,71,255
+chr21	14981853	chr21:14981853:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,13,9,0:24:255,132,200,206,0,255,255,169,255,255	2/3:2,0,9,5:16:220,253,255,52,82,41,98,157,0,133	1/2:1,11,9,0:21:255,144,200,180,0,255,255,162,255,255
+chr21	14982699	chr21:14982699:M	TTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTTT	<21>,<32>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,25:26:255,255,255,66,75,0	1/2:0,12,10:24:255,174,247,255,0,255	2/2:0,0,23:25:255,255,255,73,75,0
+chr21	14983213	chr21:14983213:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:42:255,0,217	0/1:23,18:45:212,0,255	0/0:46,2:51:0,111,255
+chr21	14984368	chr21:14984368:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:13,11:24:120,0,156	0/0:36,0:37:0,108,255
+chr21	14988422	chr21:14988422:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGATAGATAATATAGATAGATAG	<16>,<16.5>,<17.5>,<18.5>	.	.	Motif=TAGA	GT:AD:DP:PL	2/3:2,1,4,6,0:13:54,62,166,39,97,76,28,32,0,56,89,155,96,91,241	3/4:0,0,0,4,7:15:205,236,255,230,255,255,121,128,127,88,44,75,66,0,36	1/2:0,3,7,0,0:10:95,51,42,29,0,3,119,68,33,174,124,72,33,197,255
+chr21	14988500	chr21:14988500:M	TGTGTGTGTGTGTGTGTGT	<10.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:5,21,0:32:195,34,0,255,95,255	1/2:4,23,11:42:255,255,221,175,0,255	0/0:26,0,0:29:0,47,208,85,255,255
+chr21	14988518	chr21:14988518:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:48,0:48:0,135,255	0/0:36,0:44:0,120,255	0/1:20,19:44:173,0,149
+chr21	14995758	chr21:14995758:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/0:18,0:19:0,56,255	0/1:16,13:30:156,0,215
+chr21	15002474	chr21:15002474:M	ACACACACACACACACGCACCCACGCACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,8:22:89,0,204	0/1:10,10:22:127,0,126	0/0:29,0:29:0,86,255
+chr21	15014828	chr21:15014828:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,19:38:255,0,212	0/1:20,17:38:187,0,247	0/1:21,18:39:211,0,255
+chr21	15019471	chr21:15019471:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:140,15,0	1/1:0,5:6:158,18,0	.
+chr21	15024568	chr21:15024568:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,13:32:255,0,255	0/1:10,12:23:255,0,220	0/0:22,0:25:0,74,255
+chr21	15029826	chr21:15029826:M	AAATAAATAAATAAATAAATAATAAA	<5.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:17,10:27:104,0,231	0/1:17,22:39:255,0,207
+chr21	15033225	chr21:15033225:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,2:8:119,35,33,105,0,143	0/2:2,0,8:10:107,134,224,0,29,5	0/1:13,12,0:26:136,0,156,196,182,255
+chr21	15035557	chr21:15035557:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,0:17:0,49,255	0/1:13,8:24:67,0,182	0/0:15,3:19:0,3,221
+chr21	15043812	chr21:15043812:M	TTGTTTTTTTGTTTGTTTGTTTTTTG	<5.5>	.	.	Motif=TTGT	GT:AD:DP:PL	0/1:16,15:31:195,0,216	0/1:24,19:44:215,0,255	0/0:35,0:35:0,103,255
+chr21	15051273	chr21:15051273:M	TGTGTGTGTGTGCGCGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:50,0:50:0,150,255	0/1:23,8:31:129,0,255	0/0:36,0:36:0,108,255
+chr21	15070306	chr21:15070306:M	ACACACACACACACACACACACACACACA	<11.5>,<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:18,1,27:46:255,255,255,0,255,255	0/1:17,22,0:39:255,0,255,255,255,255	1/2:0,17,19:37:255,255,243,255,0,207
+chr21	15072949	chr21:15072949:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,23:49:255,0,255	0/1:22,14:37:255,0,255	1/1:0,47:48:255,144,0
+chr21	15074088	chr21:15074088:M	TTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:22:215,0,203	0/1:9,6:20:140,0,218	1/1:0,16:17:255,51,0
+chr21	15084468	chr21:15084468:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,19,0:32:255,0,218,255,187,255	0/0:17,0,1:22:0,63,255,33,255,255	1/2:2,19,7:28:255,87,145,255,0,255
+chr21	15087274	chr21:15087274:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:10:126,0,37	0/0:5,0:5:0,15,136	0/1:7,7:22:175,0,146
+chr21	15087819	chr21:15087819:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,21:40:255,0,238	0/0:39,2:43:0,90,255	0/1:20,14:35:161,0,255
+chr21	15090170	chr21:15090170:M	TATATATATATATATATATAT	<11.5>,<12.5>,<13.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,25,0,0:44:255,0,217,255,255,255,255,255,255,255	1/2:1,11,9,0:21:255,139,97,145,0,144,255,133,202,255	0/3:15,0,0,6:21:122,163,255,108,255,255,0,255,255,255
+chr21	15098083	chr21:15098083:M	TTTTTGTTTTTTGTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:15,15:30:180,0,177	0/1:20,18:38:222,0,253
+chr21	15100303	chr21:15100303:M	CTACTACTACTACTACTACTACTACTACTAC	<8.3>	.	.	Motif=CTA	GT:AD:DP:PL	1/1:0,37:38:255,114,0	1/1:0,49:49:255,147,0	1/1:0,40:40:255,120,0
+chr21	15106989	chr21:15106989:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,10,8:22:255,255,255,154,160,101,173,190,0,132	1/2:0,6,6,0:14:255,157,166,153,0,140,255,119,163,255	1/3:0,5,0,7:12:255,188,173,253,118,238,135,0,138,118
+chr21	15108169	chr21:15108169:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,21:23:255,67,0	0/1:8,10:20:126,0,82	0/1:11,16:28:202,0,122
+chr21	15115128	chr21:15115128:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:33:0,81,255	0/1:20,24:45:255,0,204	0/1:25,28:53:255,0,255
+chr21	15115145	chr21:15115145:M	TGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,30:30:255,88,0	0/1:23,19:42:188,0,253	0/1:29,22:51:219,0,255
+chr21	15116601	chr21:15116601:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:24:255,52,0	0/1:18,13:33:149,0,218	1/1:0,34:36:255,105,0
+chr21	15118986	chr21:15118986:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:82,10,0	0/1:4,3:7:29,0,46	0/0:5,0:5:0,15,85
+chr21	15120250	chr21:15120250:M	ATCTATCTATCTATCTGTCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATC	<19.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/0:21,0:24:0,63,255	0/1:8,5:14:98,0,195
+chr21	15128288	chr21:15128288:M	ACACACACACACACACACATACACACAAACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	0/1:15,20:35:255,0,167	1/1:0,30:30:255,89,0
+chr21	15136635	chr21:15136635:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:37:255,109,0	0/1:21,17:38:191,0,255	0/1:22,11:35:110,0,255
+chr21	15137363	chr21:15137363:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,10:14:133,0,23	0/1:14,9:25:100,0,161	1/1:1,11:19:166,10,0
+chr21	15138122	chr21:15138122:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,1,16:18:255,255,255,48,32,0	1/2:0,20,10:30:255,171,85,255,0,255	2/2:0,2,23:25:255,255,255,69,38,0
+chr21	15146923	chr21:15146923:M	AAAAAAAAAAAAAAACAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:19:255,53,0	0/1:17,5:27:22,0,249	0/1:10,9:20:101,0,130
+chr21	15149898	chr21:15149898:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,34:35:255,85,0	0/1:18,17:35:196,0,213	0/1:20,18:39:220,0,248
+chr21	15155800	chr21:15155800:M	CACACACACACACACACACACACACACACACACACACACAC	<19.5>,<21.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,8,7:15:255,255,255,189,190,162,138,209,0,188	1/3:2,10,0,3:16:191,49,45,223,75,255,143,0,255,255	0/2:4,0,14,0:18:188,238,255,0,58,16,238,255,70,255
+chr21	15170061	chr21:15170061:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,8:13:240,111,96,83,0,46	0/2:3,0,2:6:15,27,112,0,57,42	0/2:2,0,3:9:29,39,109,0,49,36
+chr21	15175812	chr21:15175812:M	AAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:7:92,32,30,25,0,42	0/2:6,1,2:9:30,18,89,0,82,142	0/2:2,0,2:4:43,32,54,0,32,43
+chr21	15176666	chr21:15176666:M	CTCTCTCTCTCT	<14.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,17:24:255,64,0	0/1:13,12:33:246,0,255	0/1:11,10:25:204,0,243
+chr21	15176677	chr21:15176677:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,11:34:175,0,255	0/0:29,1:36:0,66,255	0/0:21,1:24:0,41,255
+chr21	15177805	chr21:15177805:M	AATTAATTAATTAATT	<3.2>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,10:10:255,30,0	0/1:16,6:23:103,0,255	0/0:14,1:16:0,10,255
+chr21	15177819	chr21:15177819:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:25:255,52,0	0/1:13,13:28:255,0,255	0/1:13,11:26:236,0,255
+chr21	15192747	chr21:15192747:M	TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTT	<9.6>	.	.	Motif=TTTAA	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:0,11:11:199,32,0	0/1:5,8:13:111,0,55
+chr21	15195361	chr21:15195361:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:78,9,0	0/1:3,3:6:59,0,62	0/1:4,2:10:25,0,109
+chr21	15213460	chr21:15213460:M	AAAAAAAAAAAAAAGAGAAAAGAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/0:14,0:14:0,41,243	0/1:9,11:21:145,0,100
+chr21	15219706	chr21:15219706:M	AAAAAAAAAAAAAAACACAAAAAACAAAAAAAACAAAAACAAACAAACAAAAAA	<56>,<57>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,3:11:246,51,22,124,0,105	2/2:0,1,11:12:255,204,171,36,18,0	0/1:5,8,0:15:173,0,100,141,130,255
+chr21	15220733	chr21:15220733:M	TGTGCGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<21>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,5,3:21:255,94,38,128,0,104,187,15,124,255	2/3:0,1,7,9:18:255,255,250,120,107,71,88,57,0,47	0/1:20,8,0,0:30:16,0,187,82,255,255,104,255,255,255
+chr21	15220770	chr21:15220770:M	GAGAGAGAGAGAGAGAGAGA	<11>,<12>	.	.	Motif=GA	GT:AD:DP:PL	1/2:1,22,17:40:255,217,120,229,0,200	2/2:0,4,20:24:255,255,213,60,14,0	0/1:18,12,1:31:86,0,157,119,229,255
+chr21	15228415	chr21:15228415:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,8:19:70,0,117	0/0:21,1:22:0,48,255	0/1:6,12:18:133,0,41
+chr21	15229863	chr21:15229863:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/0:46,1:47:0,120,255	0/1:19,19:38:242,0,242
+chr21	15229909	chr21:15229909:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,54,0	1/1:0,17:21:255,57,0	1/1:1,24:27:255,49,0
+chr21	15232493	chr21:15232493:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,52:52:255,154,0	1/1:0,52:52:255,153,0	1/1:1,47:48:255,123,0
+chr21	15237230	chr21:15237230:M	TTTTTTTTTTTTTTTGTTTTGTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:14:225,31,0	1/1:1,9:11:148,15,0	0/1:3,10:14:136,0,20
+chr21	15239758	chr21:15239758:M	TATATATATATATATATATATATATATATATATATATATAT	<11.5>,<17.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:13:255,255,255,38,38,0	2/2:0,0,0:1:12,13,14,3,3,0	1/2:0,10,3:14:255,80,47,255,0,255
+chr21	15244443	chr21:15244443:M	AAAAAAAAAAAAAGAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,36:37:255,91,0	0/1:8,24:32:255,0,51
+chr21	15247964	chr21:15247964:M	ATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:1,3:7:0,3,15	0/0:0,1:2:0,0,4	0/1:0,2:3:1,0,2
+chr21	15249320	chr21:15249320:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,39:41:255,84,0	1/1:3,36:40:255,65,0	0/1:23,21:44:253,0,255
+chr21	15255821	chr21:15255821:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,1,4:12:52,25,142,0,52,57	1/2:0,3,5:8:142,68,59,49,0,26	0/0:14,0,0:14:0,42,255,41,255,239
+chr21	15269928	chr21:15269928:M	TTCTTCTTCTTCTCCTCCTTCTCCTCCTCCTCCTCCTTCTTCTCCTTCTTCTTCTTCTT	<20.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:8,9:17:106,0,89	0/0:14,0:14:0,41,231	0/1:5,5:11:62,0,53
+chr21	15272024	chr21:15272024:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<8.7>,<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,23,0:25:255,75,0,255,75,255	1/1:0,27,0:27:255,81,0,255,81,255	1/2:0,15,9:24:255,242,200,255,0,255
+chr21	15284786	chr21:15284786:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,23:23:255,69,0	0/1:16,16:32:255,0,255
+chr21	15296442	chr21:15296442:M	ATATATATATATATATATATATATATATATATATATATA	<9.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,13,1,17:39:255,255,255,255,209,255,255,0,255,255	1/1:0,30,0,0:37:255,110,0,255,108,255,255,110,255,255	2/3:1,0,3,4:10:188,191,218,43,70,45,11,38,0,11
+chr21	15297475	chr21:15297475:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<23>,<26>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,8,4,0:12:255,67,106,244,0,233,255,130,245,255	1/1:0,21,0,0:22:255,66,0,255,66,255,255,66,255,255	2/3:0,0,5,4:9:170,187,255,104,108,93,83,153,0,141
+chr21	15297578	chr21:15297578:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:40:255,0,241	1/1:1,39:40:255,100,0	0/0:32,1:33:0,79,255
+chr21	15298922	chr21:15298922:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATTAAATAAAT	<12.2>,<13.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,9,5:14:255,83,56,173,0,133	1/1:0,9,0:9:255,27,0,188,26,163	2/2:0,0,12:12:226,226,226,35,35,0
+chr21	15299858	chr21:15299858:M	CACACACACACACACACACACACACACACACATACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	0/2:11,0,9:20:197,152,255,0,185,251	0/0:19,0,0:19:0,55,255,57,255,255	1/2:0,6,14:20:255,233,178,85,0,43
+chr21	15304739	chr21:15304739:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:242,0,255	1/1:0,41:41:255,120,0	0/0:51,1:53:0,137,255
+chr21	15314370	chr21:15314370:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,11:17:255,255,255,35,0,52	2/2:0,0,11:14:255,255,255,41,41,0	1/1:1,4,0:7:64,1,0,79,18,148
+chr21	15314986	chr21:15314986:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:34:255,0,157	1/1:1,22:24:255,53,0	0/0:36,1:37:0,91,255
+chr21	15316699	chr21:15316699:M	TTTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,9:23:194,0,255	1/1:0,31:37:255,109,0	0/0:23,0:25:0,75,255
+chr21	15318711	chr21:15318711:M	TTTTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTT	<9>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:8,3:11:20,0,107	0/0:8,0:8:0,23,139	0/0:5,1:7:0,2,76
+chr21	15323545	chr21:15323545:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:21:29,0,212	0/0:26,3:32:0,31,255	1/1:3,24:30:255,13,0
+chr21	15339623	chr21:15339623:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:40,0,57	0/0:8,1:11:0,4,111	0/1:4,2:8:30,0,43
+chr21	15345747	chr21:15345747:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:219,0,255	0/0:37,1:40:0,99,255	0/1:14,18:33:232,0,169
+chr21	15350679	chr21:15350679:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,23:46:255,0,239	1/1:0,31:33:255,96,0	0/0:30,1:31:0,73,255
+chr21	15399504	chr21:15399504:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<14.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:12,16:29:255,0,195	0/0:21,0:24:0,68,255	0/1:13,12:26:201,0,232
+chr21	15403890	chr21:15403890:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:15:0,27,229	0/1:7,7:16:81,0,82	0/1:12,5:17:36,0,156
+chr21	15412255	chr21:15412255:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,11:25:255,0,255	0/0:37,0:38:0,114,255	0/1:7,12:21:255,0,129
+chr21	15421121	chr21:15421121:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:19:90,0,137	0/0:18,0:19:0,53,255	0/1:14,4:19:16,0,205
+chr21	15435488	chr21:15435488:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	0/1:1,3:5:43,0,2	0/1:1,1:2:10,0,10
+chr21	15445742	chr21:15445742:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,22:51:255,0,255	0/0:49,3:52:0,101,255	1/1:1,32:35:255,85,0
+chr21	15470779	chr21:15470779:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,10:22:170,0,187	0/1:14,7:25:114,0,255	0/0:16,0:18:0,49,255
+chr21	15470817	chr21:15470817:M	AGAGAGAGAGAGAGAGAGAGA	<11.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:14,15:31:139,0,106	0/1:16,8:26:50,0,142	0/0:29,0:32:0,90,255
+chr21	15471646	chr21:15471646:M	ACACACACACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,12:26:252,0,255	0/1:12,5:19:79,0,255	0/0:17,0:19:0,56,255
+chr21	15474415	chr21:15474415:M	AATAAAATAAAATAAAA	<2.8>	.	.	Motif=AATAA	GT:AD:DP:PL	0/1:18,16:34:255,0,255	0/1:14,17:31:255,0,255	0/0:43,0:43:0,129,255
+chr21	15495553	chr21:15495553:M	TTTTTTTGTTGTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,11:34:102,0,255	0/1:26,8:35:45,0,255	0/0:40,3:43:0,73,255
+chr21	15518170	chr21:15518170:M	ATATATATATATATATATATATATATATATA	<14.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,6:13:185,101,136,118,0,169	.	0/0:2,0,0:3:0,6,34,5,33,32
+chr21	15519444	chr21:15519444:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGT	<22>,<25>,<28>	.	.	Motif=TG	GT:AD:DP:PL	3/3:0,0,0,5:5:86,100,150,100,150,150,15,15,15,0	1/3:1,10,0,2:14:255,16,31,255,63,255,255,0,255,255	2/3:1,0,3,4:9:122,137,203,50,114,102,71,89,0,75
+chr21	15520130	chr21:15520130:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:21:0,60,255	0/1:10,5:16:85,0,230	0/0:19,0:20:0,57,255
+chr21	15526728	chr21:15526728:M	AAAAAAAAGAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:33:255,0,255	1/1:0,31:36:255,98,0	0/0:37,0:37:0,111,255
+chr21	15534095	chr21:15534095:M	ATATATATATATATATATATA	<11.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:17,1,11:29:241,188,255,0,255,255	1/2:0,11,7:19:255,132,80,165,0,141	0/0:36,0,0:36:0,106,255,108,255,255
+chr21	15540648	chr21:15540648:M	TTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTATTT	<9.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:6,17:32:60,7,0	1/1:0,16:19:88,29,0	0/0:10,2:34:0,14,65
+chr21	15552166	chr21:15552166:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:34:122,0,255	1/1:0,30:36:255,105,0	0/0:59,0:61:0,182,255
+chr21	15566192	chr21:15566192:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19>,<23>,<24>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,6,0:20:255,159,118,229,0,255,255,105,255,255	1/3:0,5,0,5:10:204,134,119,167,83,205,84,0,135,120	0/2:8,1,10,0:20:244,253,255,0,120,195,179,255,227,255
+chr21	15570044	chr21:15570044:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,1,6:21:46,88,255,0,194,202	0/2:13,0,6:20:54,109,255,0,185,164	1/2:3,8,3:15:116,7,48,103,0,212
+chr21	15572708	chr21:15572708:M	TATATATATATATATATATATATATATAT	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:13,1:17:0,25,211	0/0:2,0:2:0,6,33	1/1:0,7:7:120,20,0
+chr21	15575687	chr21:15575687:M	TTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,39:40:255,120,0	1/1:0,36:40:255,119,0
+chr21	15597540	chr21:15597540:M	GTGTGTCTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTATGTG	<12.2>	.	.	Motif=GTGT	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,25:25:255,75,0	1/1:1,26:28:255,49,0
+chr21	15601839	chr21:15601839:M	TCTCTCTCTCTCAATCTCTCTCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<28>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,12:13:255,39,0	1/1:0,14:14:255,42,0	1/1:0,21:23:255,68,0
+chr21	15601899	chr21:15601899:M	GTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<26>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,5,2:7:150,30,32,120,0,110	0/0:5,0,1:6:0,18,157,2,77,60	1/2:0,4,10:15:236,149,219,108,0,76
+chr21	15606237	chr21:15606237:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,103,0	0/1:12,10:22:112,0,146	1/1:1,34:35:255,85,0
+chr21	15606728	chr21:15606728:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/1:16,18:35:216,0,190	0/0:38,1:40:0,99,255
+chr21	15610775	chr21:15610775:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,1:8:0,6,102	0/1:5,4:10:45,0,52	0/0:11,0:12:0,35,193
+chr21	15625607	chr21:15625607:M	CACACACACACACACACACACACGCACACACACACACACA	<19>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/2:3,16,16:35:255,250,255,252,0,255	0/1:7,20,0:29:255,0,39,255,105,255	1/2:1,15,8:24:255,131,199,255,0,255
+chr21	15628454	chr21:15628454:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,13:27:255,0,180	0/1:4,14:20:255,0,34	0/1:12,10:25:189,0,220
+chr21	15628492	chr21:15628492:M	AGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGACAGAGAGAGAGA	<26.5>,<27.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:10,6,3:20:60,0,92,27,105,250	0/2:7,2,11:20:215,121,159,0,68,118	0/2:12,3,5:20:73,32,138,0,126,247
+chr21	15628596	chr21:15628596:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,51:52:255,135,0	0/1:22,25:47:255,0,255	1/1:0,48:48:255,142,0
+chr21	15629254	chr21:15629254:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,18,8,0:31:255,234,174,255,0,255,255,230,255,255	0/2:2,0,14,1:17:255,255,255,0,65,23,255,255,17,255	1/3:0,18,0,13:32:255,229,255,255,255,255,255,0,255,255
+chr21	15629909	chr21:15629909:M	AAAAAAAAAACAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:44:255,129,0	0/1:16,18:35:227,0,182	1/1:1,32:35:255,84,0
+chr21	15632312	chr21:15632312:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,21:43:255,0,255	0/1:21,26:48:255,0,245	0/1:35,28:63:255,0,255
+chr21	15636907	chr21:15636907:M	ATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:19,14:37:255,0,255	0/1:21,10:31:227,0,255	0/1:18,11:31:255,0,255
+chr21	15645363	chr21:15645363:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:16,15:33:255,0,255	1/1:0,37:38:255,114,0
+chr21	15648427	chr21:15648427:M	AAGAAAGAAAGA	<3.8>	.	.	Motif=AAGA	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:24,18:42:255,0,255	1/1:0,35:35:255,105,0
+chr21	15659543	chr21:15659543:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,6:16:57,0,120	0/1:15,6:23:34,0,201	0/1:12,5:17:35,0,155
+chr21	15664869	chr21:15664869:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,14:18:240,25,0	0/1:8,9:22:113,0,95	1/1:3,19:24:255,17,0
+chr21	15667565	chr21:15667565:M	ACACTACACACACACACACACACACACACACACAAATACACACACACA	<22>,<23>,<25>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,8,0:21:255,128,89,243,0,183,255,149,244,255	1/3:0,15,0,11:26:255,194,255,255,255,255,255,0,255,255	2/2:0,0,18,0:18:255,255,255,53,53,0,255,255,54,255
+chr21	15669218	chr21:15669218:M	AAAAAAAAAAAAAACAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:6,10:17:123,0,63	1/1:0,29:29:255,85,0
+chr21	15672189	chr21:15672189:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,10:15:192,7,0	1/1:0,16:18:255,52,0	1/1:1,13:16:241,29,0
+chr21	15678835	chr21:15678835:M	ACACACACACACACACACACACACACACACACACACA	<20.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,12,0:30:255,208,124,255,0,224,255,178,255,255	0/1:17,6,0,0:23:104,0,255,99,255,255,155,255,255,255	2/3:0,0,6,11:17:255,255,255,190,188,141,104,87,0,54
+chr21	15679780	chr21:15679780:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,92	0/0:9,0:9:0,26,150	0/0:10,1:11:0,15,154
+chr21	15704677	chr21:15704677:M	ACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	0/0:28,0:31:0,91,255	0/1:18,10:28:97,0,239	0/0:44,0:44:0,130,255
+chr21	15706489	chr21:15706489:M	ATATATATATATATGTGTGTGTATATATATATATATATATA	<24.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,11:21:255,63,0	0/0:12,0:14:0,14,255	1/1:0,11:16:255,48,0
+chr21	15706529	chr21:15706529:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<12.5>,<16.5>,<17.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,0,9,8:19:255,255,255,73,97,40,123,128,0,73	1/2:0,9,4,1:16:255,84,86,255,0,250,255,34,252,255	2/2:0,0,17,1:22:255,255,255,62,66,0,255,255,48,224
+chr21	15708937	chr21:15708937:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<26>,<27>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,3,0:7:164,170,180,21,21,0,109,110,17,92	1/2:0,5,2,0:10:213,57,65,146,0,149,188,30,146,180	2/3:0,0,1,3:10:138,151,212,39,63,34,74,78,0,55
+chr21	15712760	chr21:15712760:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:58,6,0	0/0:1,0:3:0,7,44	1/1:0,3:7:105,14,0
+chr21	15714379	chr21:15714379:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,5,10,0:16:209,163,250,74,0,107,254,255,143,255	1/3:0,9,0,9:19:255,246,217,255,247,255,163,0,255,240	2/2:0,0,20,0:20:255,255,255,59,60,0,255,255,60,255
+chr21	15730977	chr21:15730977:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3,1:6:34,0,27,34,12,87	1/1:0,4,0:6:76,14,0,87,14,122	0/2:3,0,5:8:61,84,184,0,42,27
+chr21	15750215	chr21:15750215:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,3:6:25,28,49,0,12,1	0/1:1,3,1:6:54,0,15,25,6,28	1/2:0,1,3:5:48,28,25,12,0,1
+chr21	15775740	chr21:15775740:M	CCCCCCCCCCCCCCCGCCCCC	<20>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,1:2:16,3,0	1/1:0,1:1:15,3,0	1/1:0,3:3:47,9,0
+chr21	15790651	chr21:15790651:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,2:24:0,34,255	0/0:19,1:22:0,47,255	0/1:6,9:17:118,0,67
+chr21	15806426	chr21:15806426:M	TTTCTTTTTTTTTTTTCTTTCTTTTCT	<5.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:1,34:35:255,84,0	1/1:0,28:28:255,83,0	1/1:0,44:44:255,130,0
+chr21	15827753	chr21:15827753:M	TGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<28.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:5,6:12:146,0,127	0/1:4,4:9:99,0,93	0/1:1,8:11:215,0,1
+chr21	15846123	chr21:15846123:M	TATATATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,4:11:49,0,10	0/0:1,0:1:0,3,13	0/1:1,0:5:1,0,8
+chr21	15860954	chr21:15860954:M	ATATATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,13,0:28:124,0,94,207,175,255	0/1:13,8,0:23:66,0,105,135,170,255	1/2:1,12,12:26:255,255,255,143,0,255
+chr21	15860976	chr21:15860976:M	AGAGAGAGAGAGAGAGAGAG	<13>,<14>	.	.	Motif=AG	GT:AD:DP:PL	0/1:9,12,0:23:255,0,191,177,231,255	0/2:9,1,12:22:255,143,255,0,218,195	0/1:19,13,0:38:255,0,255,222,255,255
+chr21	15862572	chr21:15862572:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/1:5,10:16:126,0,49	0/0:20,0:21:0,61,255
+chr21	15862749	chr21:15862749:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,31:51:255,0,204	0/0:47,0:48:0,140,255	0/1:19,30:50:255,0,209
+chr21	15864159	chr21:15864159:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:24:0,49,255	0/1:11,10:21:109,0,127	0/0:23,0:28:0,81,255
+chr21	15884470	chr21:15884470:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,1:17:0,31,255	0/1:8,4:12:33,0,101	0/0:12,2:15:0,8,183
+chr21	15891364	chr21:15891364:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,6,4:11:231,59,38,115,0,87	2/2:1,0,15:16:236,239,255,30,47,0	1/1:0,8,0:13:234,13,0,160,25,150
+chr21	15891808	chr21:15891808:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,18:36:225,0,225	0/1:15,8:24:70,0,199	0/1:16,17:36:201,0,211
+chr21	15895048	chr21:15895048:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,42:45:255,111,0	1/1:1,45:46:255,117,0
+chr21	15903621	chr21:15903621:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,6:7:170,21,0
+chr21	15905522	chr21:15905522:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,5:30:13,0,255	0/1:11,13:27:173,0,109	0/0:28,2:32:0,58,255
+chr21	15907947	chr21:15907947:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:4:23,0,23	1/1:0,5:5:83,15,0	0/0:8,0:8:0,23,136
+chr21	15956506	chr21:15956506:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,2:37:0,71,255	0/0:21,1:23:0,49,255	0/1:24,22:47:255,0,255
+chr21	15959355	chr21:15959355:M	ACACACACACACACACACACACACACGCACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,12:18:89,0,18	1/1:0,4:5:55,13,0	0/1:7,3:10:7,0,52
+chr21	15959397	chr21:15959397:M	ATATATATATATATATATATATATATATATATAT	<18>,<21>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,4:8:136,98,86,47,0,86	.	2/2:0,0,1:1:28,28,28,3,3,0
+chr21	15963134	chr21:15963134:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:32,0,120	0/0:11,1:13:0,21,177	0/1:11,4:18:20,0,158
+chr21	15971170	chr21:15971170:M	TATCTATCTATCTAATGTATCTTATCTATCTATCTATCTATCTATCTATCTATCTATGTATCTA	<18>,<19>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,3,3:6:163,57,40,57,0,40	1/2:0,8,8:16:255,144,98,143,0,98	1/1:0,8,0:10:238,25,0,156,7,129
+chr21	15974836	chr21:15974836:M	AAATAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<7.8>,<12.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/3:0,0,13,11:24:255,255,255,208,209,140,211,246,0,178	2/2:0,0,11,0:11:198,229,255,32,33,0,198,229,32,198	1/3:0,11,0,10:21:255,255,243,255,184,255,255,0,255,255
+chr21	15985762	chr21:15985762:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,11:15:255,195,157,44,0,8	0/2:4,3,9:18:229,123,143,0,23,67	1/2:1,12,7:20:255,100,60,152,0,157
+chr21	15987744	chr21:15987744:M	TATTTTGTTTTTTTAATTTTGTTTTATATTATTTTATTTTATTTT	<9.4>,<9.6>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:0,21,0:21:255,63,0,255,63,255	1/1:0,22,0:22:255,66,0,255,66,255	1/2:0,17,20:37:255,255,255,255,0,255
+chr21	15988227	chr21:15988227:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:2,39:41:255,85,0	0/1:22,16:38:188,0,255
+chr21	15993247	chr21:15993247:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,12:13:255,255,228,39,38,0	2/2:0,0,9:9:255,178,154,27,26,0	1/2:1,5,5:11:179,69,56,56,0,67
+chr21	16003384	chr21:16003384:M	AAAAAAGAAAAAAGAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,37:37:255,109,0	1/1:0,38:38:255,112,0
+chr21	16004974	chr21:16004974:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:28,0,9	0/0:2,0:2:0,6,34	0/1:1,4:5:57,0,3
+chr21	16008278	chr21:16008278:M	ACACACACACACACACACACACACACACA	<19.5>,<21.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,16,0:17:255,255,255,51,48,0,255,255,51,255	2/3:0,0,7,3:11:255,255,255,78,75,52,196,182,0,183	1/2:0,10,5,0:17:255,135,99,255,0,246,255,132,255,255
+chr21	16011788	chr21:16011788:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<10>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,34,0:36:255,108,0,255,108,255	1/1:0,33,0:35:255,105,0,255,105,255	1/2:0,14,9:24:255,238,196,255,0,255
+chr21	16012632	chr21:16012632:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,65,0	1/1:0,9:10:247,27,0	1/1:0,19:22:255,60,0
+chr21	16033977	chr21:16033977:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/0:29,1:33:0,76,255	0/1:9,12:25:159,0,109
+chr21	16036689	chr21:16036689:M	TTATTTATTTATTTATTTATTT	<6.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:34,0:34:0,100,255	0/1:9,14:23:195,0,102
+chr21	16052752	chr21:16052752:M	TTTTTTTTTCTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,18:36:227,0,227	0/1:21,13:34:128,0,255	0/0:34,0:34:0,100,255
+chr21	16057473	chr21:16057473:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:136,0,255	0/0:31,0:32:0,94,255	0/1:17,17:35:220,0,211
+chr21	16063690	chr21:16063690:M	ATCTATCCATCTATTACCTATCTATCTATCTATCTATCTATCTATATATCTATCTAT	<15.2>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:13,10:23:124,0,182	0/1:7,12:19:161,0,70	0/0:17,0:17:0,50,255
+chr21	16066252	chr21:16066252:M	TCTTTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTT	<10.8>,<11.5>,<13.5>	.	.	Motif=TCTT	GT:AD:DP:PL	1/3:0,3,0,3:12:160,114,105,136,96,142,46,0,63,73	2/3:0,0,4,0:7:93,85,79,18,17,5,73,65,0,70	2/3:0,2,4,6:20:195,162,155,96,75,93,50,17,0,72
+chr21	16071570	chr21:16071570:M	CCCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,4:7:135,9,0	.	1/1:0,2:3:76,9,0
+chr21	16091623	chr21:16091623:M	ATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,21:21:255,63,0	0/1:14,9:23:209,0,255	1/1:0,22:22:255,66,0
+chr21	16095631	chr21:16095631:M	AGATAGATAGCAGTAAGATAGGTAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<17.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/1:0,13:14:252,41,0	0/1:4,4:9:54,0,45	0/1:8,4:12:38,0,111
+chr21	16095995	chr21:16095995:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:255,44,0	1/1:2,21:23:255,33,0	1/1:1,22:23:255,50,0
+chr21	16097598	chr21:16097598:M	TGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,0:33:0,88,255	0/0:26,2:29:0,47,255	0/1:15,20:36:255,0,170
+chr21	16105071	chr21:16105071:M	TTTTTTTTGGTTTTGTTTTTGTTTTTTTTGTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/1:8,12:20:158,0,86	0/0:17,0:17:0,50,255
+chr21	16114233	chr21:16114233:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/0:23,1:26:0,56,255	0/1:16,8:26:67,0,229
+chr21	16116725	chr21:16116725:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,109,0	0/1:13,18:31:232,0,141	1/1:0,50:50:255,148,0
+chr21	16154947	chr21:16154947:M	AAATAAATAAATAAATAATAAATAAATAAATAAATAAATAAA	<33.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:9,3:12:6,0,229	0/0:7,0:8:0,21,206	0/0:10,1:11:0,19,255
+chr21	16157677	chr21:16157677:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:24:255,0,135	0/1:11,8:21:180,0,242	0/1:10,15:27:255,0,201
+chr21	16164271	chr21:16164271:M	TTTTCTCTTCTTTTCTTTTCTTTTCTTTTTTTTTTTT	<7.6>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:9,4:14:12,0,85	0/1:4,3:8:18,0,31	0/1:11,8:20:55,0,84
+chr21	16167144	chr21:16167144:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<21>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,12:25:255,213,255,255,0,255	1/2:0,14,12:26:255,204,255,255,0,255	1/2:0,14,12:30:255,233,255,255,0,255
+chr21	16171591	chr21:16171591:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,1:3:78,17,9,35,0,26	1/2:0,2,4:8:183,67,44,53,0,34	1/2:0,4,2:9:208,35,9,97,0,78
+chr21	16178919	chr21:16178919:M	AAAAAAAAAAAGAAAAGAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:0,38:39:255,114,0	1/1:2,37:39:255,79,0
+chr21	16182568	chr21:16182568:M	TCTCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:4,14:19:220,0,23	1/1:1,15:16:255,29,0	1/1:1,6:7:99,2,0
+chr21	16187807	chr21:16187807:M	TCCTTCCTTCCTCCTTTCCTTCTTTCCTTTCTTTCTTTCTTGCTTCCTTCCTTCCCTCCTTCCTTC	<5>,<8.2>,<18.5>	.	.	Motif=TCCT	GT:AD:DP:PL	2/3:0,1,3,10:15:255,255,255,234,222,239,75,49,0,45	1/3:0,3,0,7:10:232,163,166,240,175,252,77,0,77,56	2/3:0,1,6,5:13:255,242,246,117,98,106,151,125,0,136
+chr21	16189426	chr21:16189426:M	TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,60,0	1/1:0,29:31:255,90,0	1/1:0,24:25:255,73,0
+chr21	16192978	chr21:16192978:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,28:31:255,36,0	1/1:1,28:29:255,68,0	1/1:1,37:38:255,94,0
+chr21	16193863	chr21:16193863:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,14:29:255,243,172,208,0,173	1/1:3,15,1:19:218,4,0,201,38,255	1/2:0,6,14:20:255,243,189,90,0,48
+chr21	16193922	chr21:16193922:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,9,11:22:255,222,163,137,0,98	1/1:1,20,1:22:255,47,0,255,47,255	1/2:4,19,8:32:255,63,52,200,0,255
+chr21	16197311	chr21:16197311:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,8:25:144,0,255	1/1:0,22:27:255,45,0	0/0:35,0:37:0,111,255
+chr21	16205191	chr21:16205191:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:36:200,0,255	1/1:1,48:49:255,126,0	0/0:49,1:50:0,129,255
+chr21	16207977	chr21:16207977:M	ACACATACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,23:41:255,0,255	1/1:1,20:23:255,39,0	0/0:43,0:44:0,132,255
+chr21	16213875	chr21:16213875:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,26:42:255,0,183	1/1:0,48:48:255,141,0	0/0:32,2:34:0,63,255
+chr21	16218220	chr21:16218220:M	TATATATATATATAACATATATATATCTATATATATATATAGATATATATA	<26.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:9,1:10:0,11,146	1/1:0,2:2:35,6,0	0/1:6,3:9:28,0,80
+chr21	16220076	chr21:16220076:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,8:25:153,0,255	0/0:25,0:25:0,75,255	0/1:9,12:22:255,0,172
+chr21	16220124	chr21:16220124:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:23:162,0,215	0/0:9,0:11:0,27,228	0/1:5,3:11:53,0,105
+chr21	16226937	chr21:16226937:M	AAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:5:56,0,17	1/1:0,2:4:57,6,0	1/1:0,4:5:112,12,0
+chr21	16237993	chr21:16237993:M	TATATATATATATACACATATATATGAGAATATATATCTATATCTATATATATATAT	<30.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:20,0:20:0,58,255	0/0:15,0:15:0,44,248	0/1:9,7:20:96,0,98
+chr21	16238049	chr21:16238049:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,15:29:66,0,53	1/1:5,17:22:109,10,0	0/1:17,12:32:30,0,101
+chr21	16238083	chr21:16238083:M	TATATATATATA	<5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,9:30:19,0,127	0/0:21,1:22:0,47,205	0/0:20,5:29:0,11,161
+chr21	16239526	chr21:16239526:M	TTTTTCTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:16:47,0,105	1/1:1,6:8:88,8,0	0/1:11,7:21:52,0,124
+chr21	16247684	chr21:16247684:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,9,9:21:255,108,104,85,0,136	1/1:0,19,0:21:255,48,0,255,48,255	1/2:0,12,13:26:255,235,165,181,0,139
+chr21	16248034	chr21:16248034:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT	<13.8>	.	.	Motif=TATG	GT:AD:DP:PL	1/1:0,17:18:255,53,0	1/1:0,19:22:255,65,0	1/1:0,16:20:255,59,0
+chr21	16249011	chr21:16249011:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,27:30:255,51,0	1/1:1,26:29:255,67,0	1/1:0,27:27:255,79,0
+chr21	16249737	chr21:16249737:M	TTTTTTTCTTTTTTCTTTTTTTTTTTCTTTTCTTTTTTTTTTTTTT	<49>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:174,12,0	1/1:0,5:5:140,15,0	1/1:0,3:4:98,12,0
+chr21	16251228	chr21:16251228:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:24,19:44:255,0,255	0/0:31,0:31:0,93,255	0/1:28,24:53:255,0,255
+chr21	16254112	chr21:16254112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:34:255,81,0	1/1:1,37:38:255,94,0	1/1:0,29:30:255,88,0
+chr21	16260029	chr21:16260029:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,22:38:255,0,195	1/1:1,38:41:255,85,0	0/1:33,21:54:242,0,255
+chr21	16261362	chr21:16261362:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,31:45:255,0,226	1/1:0,32:33:255,99,0	0/1:19,18:38:255,0,255
+chr21	16265716	chr21:16265716:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,5:11:178,70,57,57,0,68	0/1:3,9,1:13:127,0,13,111,34,183	1/2:1,5,5:11:174,68,55,56,0,66
+chr21	16273115	chr21:16273115:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:16:0,24,206	0/1:5,3:9:26,0,56	0/1:4,2:8:10,0,64
+chr21	16273814	chr21:16273814:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,17:19:255,255,255,55,20,0	1/2:1,12,8:23:255,98,81,203,0,161	2/2:2,1,23:26:255,255,255,41,58,0
+chr21	16274638	chr21:16274638:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,15:31:255,255,192,232,0,184	2/2:1,3,26:31:255,255,255,55,27,0	1/2:1,24,17:43:255,255,181,255,0,255
+chr21	16284659	chr21:16284659:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<15.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,24,0:30:255,255,255,89,86,0,255,255,89,255	1/2:0,12,11,0:30:255,255,255,255,0,234,255,255,255,255	2/3:0,0,7,4:12:245,240,255,66,121,100,191,174,0,177
+chr21	16286560	chr21:16286560:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:1,36:37:255,91,0	0/1:17,25:42:255,0,194
+chr21	16296053	chr21:16296053:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,1:9:0,6,63	1/1:1,8:13:109,21,0	0/0:2,0:4:0,10,37
+chr21	16314013	chr21:16314013:M	TATATATATATATATATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,3:4:32,8,0	.	1/1:0,1:1:11,3,0
+chr21	16318998	chr21:16318998:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	0/1:8,2:11:4,0,102	0/1:6,4:10:38,0,72
+chr21	16324595	chr21:16324595:M	TATATATATATATAACATAGACATATAATATATATTTAAATAAATTATATAAGTATATATA	<19>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,9:19:255,0,164	0/1:3,1:4:19,0,61	0/1:4,5:10:160,0,89
+chr21	16325630	chr21:16325630:M	TATATATATATATGTATTATATAT	<13>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,21:22:255,62,0	1/1:1,27:30:255,65,0	1/1:1,33:34:255,82,0
+chr21	16325924	chr21:16325924:M	TGTGTGTGCTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:20:255,60,0	1/1:0,20:21:255,63,0	1/1:0,15:19:255,53,0
+chr21	16326942	chr21:16326942:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:111,20,0	1/1:0,4:4:61,12,0	1/1:1,6:8:90,7,0
+chr21	16334137	chr21:16334137:M	TTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,51,0	1/1:0,12:14:255,39,0	1/1:0,14:17:255,44,0
+chr21	16339960	chr21:16339960:M	TATATATATATTTATATAGGTTATATATATATATTTATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,6:30:70,0,255	0/1:12,3:15:33,0,255	0/1:14,5:20:72,0,255
+chr21	16343728	chr21:16343728:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:0,32:33:255,86,0	1/1:3,33:37:255,52,0
+chr21	16349644	chr21:16349644:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47:48:255,142,0	1/1:0,47:49:255,144,0	1/1:0,57:61:255,180,0
+chr21	16351369	chr21:16351369:M	TTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:2,15:20:255,20,0	1/1:2,12:14:183,5,0	1/1:1,6:7:90,2,0
+chr21	16352876	chr21:16352876:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:25:255,73,0	1/1:1,42:44:255,111,0	1/1:0,39:40:255,118,0
+chr21	16353119	chr21:16353119:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,5:6:164,88,71,18,0,0	1/2:0,5,10:16:255,175,132,84,0,38	1/2:0,6,5:12:255,87,52,111,0,79
+chr21	16357494	chr21:16357494:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,21:22:255,65,0	1/1:0,20:20:255,60,0	1/1:0,16:18:255,51,0
+chr21	16365332	chr21:16365332:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:103,18,0	0/1:3,2:6:32,0,32	1/1:0,3:4:39,0,0
+chr21	16368736	chr21:16368736:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:212,35,0	0/1:6,7:17:99,0,57	0/1:2,8:18:124,0,8
+chr21	16369234	chr21:16369234:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:4:85,64,57,12,11,0	1/2:0,2,2:5:113,43,30,33,0,18	1/2:0,4,5:9:239,84,58,67,0,41
+chr21	16373579	chr21:16373579:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:13,14:28:175,0,148	0/0:34,0:34:0,100,255
+chr21	16387373	chr21:16387373:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/1:34,22:59:236,0,255	0/1:23,19:42:223,0,255
+chr21	16389399	chr21:16389399:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:3,34:39:255,51,0	1/1:1,47:50:255,119,0
+chr21	16390562	chr21:16390562:M	TTTTTTTTTTTTTTTTT	<18>,<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/3:2,1,1,3:8:63,45,64,35,47,90,0,3,29,58	1/2:1,4,3,2:12:91,45,54,32,0,103,56,21,72,144	0/2:9,0,9,0:20:204,213,255,0,133,202,222,255,231,255
+chr21	16393300	chr21:16393300:M	TTATTATTATTATTATTATTATTATTAT	<8.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,23:25:255,74,0	1/1:0,16:16:255,47,0	1/1:0,34:35:255,103,0
+chr21	16399731	chr21:16399731:M	TTTTGTTTTTTGTTTTTTGTTTTTTTT	<26>,<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15,0:26:207,0,132,255,206,255	1/2:0,12,12:25:255,255,255,207,0,255	0/2:15,0,15:30:255,255,255,0,255,255
+chr21	16400433	chr21:16400433:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6,1:13:147,0,105,97,72,152	1/2:3,16,4:24:255,8,30,227,0,214	0/2:4,1,6:12:81,71,175,0,60,46
+chr21	16407333	chr21:16407333:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,24:27:255,24,0	1/1:4,25:30:255,18,0	1/1:0,40:42:255,123,0
+chr21	16409823	chr21:16409823:M	TATATATATGTGTGTATATATATATATATATATATATATATATACACACACACATATATATATATACACACATATATATATATATA	<19>,<39>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,4:12:255,126,110,133,0,116	2/2:0,0,0:3:33,35,37,6,6,0	1/1:0,3,0:7:109,12,0,109,12,109
+chr21	16413109	chr21:16413109:M	ATATATATATATATATATATATATATATATATATA	<15.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:8,3,5:17:41,12,167,0,64,52	0/1:1,0,0:4:36,0,10,25,10,28	1/1:0,3,0:9:148,23,0,102,21,85
+chr21	16413143	chr21:16413143:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<24>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,6:7:173,20,0	1/1:0,0:2:16,5,0	1/1:0,1:4:26,3,0
+chr21	16414148	chr21:16414148:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,0:52:0,143,255	0/0:31,1:32:0,76,255	0/1:24,11:36:103,0,255
+chr21	16415006	chr21:16415006:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:14,20:34:252,0,146	0/0:56,0:57:0,167,255
+chr21	16417594	chr21:16417594:M	ATATATATATATATATATATATATATATA	<8.5>,<19.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:7:122,122,122,15,15,0	1/1:0,18,0:19:255,54,0,255,53,255	0/0:0,0,0:1:0,0,0,0,0,0
+chr21	16420341	chr21:16420341:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,22:26:255,22,0	1/1:2,27:29:255,51,0	1/1:0,21:23:255,67,0
+chr21	16427648	chr21:16427648:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:144,18,0	0/0:2,0:6:0,1,63	1/1:0,5:9:177,14,0
+chr21	16429651	chr21:16429651:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:91,9,0	0/0:0,0:2:0,0,0	1/1:0,2:3:77,9,0
+chr21	16431758	chr21:16431758:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:37:0,88,255	0/0:37,2:42:0,88,255	0/1:16,11:30:113,0,213
+chr21	16437303	chr21:16437303:M	AAAAAGACAAAAAAAAAAAAAGAAAAAGAA	<4.8>,<5.2>	.	.	Motif=AAAAAG	GT:AD:DP:PL	1/2:0,14,5:20:255,102,88,255,0,255	0/1:10,17,1:28:255,0,136,255,159,255	1/2:0,14,3:18:255,63,43,255,0,255
+chr21	16440491	chr21:16440491:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:20:0,40,255	0/0:12,0:15:0,38,220	0/1:14,8:23:77,0,201
+chr21	16448675	chr21:16448675:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:27,12:39:164,0,255	1/1:1,21:23:255,42,0	0/0:32,0:33:0,96,255
+chr21	16448713	chr21:16448713:M	TGTGTGTGTGTGTGTATGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,4:5:56,13,0	1/1:0,1:2:21,5,0	0/0:17,1:19:0,30,172
+chr21	16448733	chr21:16448733:M	TATATATATGTGTGTATATATATATGTATATATATATATATA	<22>,<29>,<30>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,3,3:8:189,189,189,36,36,13,36,36,0,13	3/3:0,0,3,5:14:233,228,225,59,52,41,21,14,2,0	1/3:0,7,0,2:11:76,39,28,64,16,210,48,0,199,194
+chr21	16448774	chr21:16448774:M	ACACACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,17,6:26:255,55,8,202,0,180	1/1:2,35,0:38:255,63,0,255,103,255	2/2:2,0,30:32:255,255,255,40,79,0
+chr21	16462413	chr21:16462413:M	CACAGACACACACACACACACACACACACACACACACACACACACACAC	<22.5>,<23.5>,<25.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,18,0:18:255,255,255,53,53,0,255,255,54,255	2/3:0,0,9,6:15:208,225,255,99,160,129,149,149,0,214	1/2:0,7,4,0:16:255,61,29,152,0,116,255,72,152,255
+chr21	16478618	chr21:16478618:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,8:23:75,0,200	0/0:12,2:16:0,2,170	0/1:9,10:25:145,0,97
+chr21	16503580	chr21:16503580:M	AAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:1,15:16:242,30,0	1/1:2,24:26:255,41,0
+chr21	16520902	chr21:16520902:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,9:24:255,161,196,228,0,255	0/1:9,6,0:17:72,0,99,116,123,255	1/2:1,13,7:22:255,102,136,216,0,255
+chr21	16534952	chr21:16534952:M	TTTTTGTTTTTTTTTTTTGTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,114,0	1/1:1,27:31:255,62,0	1/1:0,25:25:255,73,0
+chr21	16544226	chr21:16544226:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:28:226,0,119	0/1:17,21:39:255,0,181	0/1:15,20:37:255,0,170
+chr21	16546314	chr21:16546314:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,2:4:22,0,10	0/1:1,1:2:10,0,10	0/1:1,3:4:38,0,5
+chr21	16555773	chr21:16555773:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:47:255,138,0	1/1:0,42:42:255,123,0	1/1:2,49:51:255,114,0
+chr21	16558539	chr21:16558539:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:34,6,0	1/1:0,3:4:60,11,0	0/1:2,2:5:19,0,29
+chr21	16584313	chr21:16584313:M	ACACACACACACACACACACACACACACACACTCACAAACACAC	<21>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,8:23:78,0,207	0/1:16,11:28:119,0,196	0/1:17,13:31:151,0,214
+chr21	16588407	chr21:16588407:M	TTTTTTCTTTTCTTTCTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,96,255	0/1:17,16:33:160,0,175	0/0:41,0:41:0,119,255
+chr21	16615525	chr21:16615525:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,36:40:255,116,0	1/1:0,27:30:255,85,0
+chr21	16619903	chr21:16619903:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:108,18,0	1/1:1,10:13:153,10,0	1/1:1,16:18:255,33,0
+chr21	16622858	chr21:16622858:M	ACACACACACACACACACACACACACGTGCACACACACACACACA	<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6:21:47,0,212	0/1:6,10:17:123,0,64	1/1:1,14:15:231,26,0
+chr21	16627286	chr21:16627286:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:2,0,3:6:38,44,95,0,34,21	1/2:0,1,2:4:54,28,25,17,0,8	1/2:1,3,4:8:118,41,58,34,0,29
+chr21	16632173	chr21:16632173:M	TTTTTTTTTTTTTTT	<18>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8,0:9:255,24,0,255,13,252	1/2:0,8,3:13:255,79,65,228,0,229	2/2:0,0,4:7:149,136,132,18,8,0
+chr21	16634217	chr21:16634217:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,8:15:102,0,84	0/1:13,11:27:131,0,159	1/1:1,20:24:255,51,0
+chr21	16640784	chr21:16640784:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,25,0:26:255,75,0,255,76,255	1/2:0,4,8:14:255,148,113,71,0,42	1/1:0,27,1:29:255,84,0,255,67,255
+chr21	16653910	chr21:16653910:M	AAAAAAAAAAAAAAAAAAAAA	<16>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,2:13:255,31,14,255,0,255	1/1:0,5,0:6:157,18,0,157,18,157	2/2:1,0,5:6:63,80,150,2,18,0
+chr21	16658293	chr21:16658293:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,6,0:20:255,169,131,255,0,255,255,106,255,255	1/3:0,18,0,16:38:255,255,255,255,255,255,255,0,255,255	2/2:0,0,12,0:15:255,255,255,45,45,0,255,255,44,250
+chr21	16659712	chr21:16659712:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,17:31:228,0,154	0/1:31,17:49:157,0,255	1/1:2,38:41:255,84,0
+chr21	16663247	chr21:16663247:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:32:216,0,175	0/1:15,22:37:255,0,155	0/0:42,1:43:0,108,255
+chr21	16671838	chr21:16671838:M	TATTCTATCCATATTCTATTCT	<2.2>	.	.	Motif=TATTC	GT:AD:DP:PL	0/1:23,27:50:255,0,255	0/1:18,25:43:255,0,255	0/0:28,0:28:0,84,255
+chr21	16673104	chr21:16673104:M	ACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,16:32:255,0,255	0/1:15,7:23:127,0,255	0/0:28,0:29:0,87,255
+chr21	16682666	chr21:16682666:M	TATATATATATATATATATATATAT	<10>,<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,5,14:29:172,90,255,0,0,12	0/0:5,0,0:5:0,15,135,14,76,62	1/2:3,4,6:15:130,45,123,36,0,33
+chr21	16682690	chr21:16682690:M	TTTTTTTTTTT	<10>,<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/3:13,0,0,10:24:247,255,255,252,255,255,0,187,184,255	1/2:3,3,4,0:10:35,21,84,7,0,58,64,102,84,227	3/3:0,0,0,5:8:194,197,202,163,164,150,23,24,18,0
+chr21	16683234	chr21:16683234:M	CTCTCTCTCTCCCTCTGTCTCTCTCTCTCTCTCTC	<16.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:0,29:29:255,85,0	1/1:0,30:30:255,89,0
+chr21	16687644	chr21:16687644:M	AAAGAAAGAAAGAAAGAAA	<5.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:15,10:28:127,0,223	0/1:14,13:30:161,0,190	0/1:10,15:27:206,0,125
+chr21	16687752	chr21:16687752:M	TTTTTTTATTTTTATTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:35:199,0,255	0/1:15,14:29:164,0,182	0/1:20,19:39:235,0,254
+chr21	16689770	chr21:16689770:M	AAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:130,15,0	0/1:1,1:3:27,0,19	.
+chr21	16697281	chr21:16697281:M	ATTATTATTATT	<6>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,42:45:255,126,0	1/1:0,29:33:255,87,0	1/1:0,35:40:255,105,0
+chr21	16704013	chr21:16704013:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,52:52:255,152,0	1/1:0,49:49:255,142,0	1/1:0,55:55:255,160,0
+chr21	16710054	chr21:16710054:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:31:74,0,255	0/1:11,17:31:205,0,131	0/0:37,0:39:0,114,255
+chr21	16711351	chr21:16711351:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:15,0,60	0/1:1,4:6:50,0,9	0/1:5,7:12:85,0,51
+chr21	16714249	chr21:16714249:M	TATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,4:4:122,12,0	1/1:0,9:9:255,27,0
+chr21	16721263	chr21:16721263:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,44:44:255,130,0	1/1:0,39:39:255,115,0
+chr21	16730365	chr21:16730365:M	TTATTATTATTATTATTATTATTATTATTATTAT	<12.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10:10:189,30,0	0/1:5,2:8:12,0,76	0/1:10,7:17:79,0,135
+chr21	16743187	chr21:16743187:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:46:0,135,255	0/1:23,18:44:214,0,255	0/1:27,16:45:166,0,255
+chr21	16743301	chr21:16743301:M	TCTCTCTCTCTCTCTCTCTCTCACTCCCCTTTCTCTCTCTC	<19.5>,<21.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,16,0:17:255,50,0,255,51,255	1/2:0,15,11:27:255,193,234,255,0,255	1/2:0,9,15:24:255,255,255,163,0,186
+chr21	16751556	chr21:16751556:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,8:12:206,119,107,61,0,29	1/2:2,5,7:15:196,66,97,59,0,53	1/2:2,13,9:26:255,98,106,198,0,165
+chr21	16752589	chr21:16752589:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:25,22:47:255,0,255	0/1:20,17:38:206,0,255
+chr21	16755802	chr21:16755802:M	CCAAAAACAAAACAAAACAAAACCAAAAC	<1.5>	.	.	Motif=CCAAAA	GT:AD:DP:PL	0/0:29,1:31:0,65,255	0/1:13,5:19:81,0,255	0/0:34,1:39:0,77,255
+chr21	16764388	chr21:16764388:M	GTGTGTGTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:34:0,102,255	0/1:10,3:16:76,0,222	0/1:13,15:31:255,0,255
+chr21	16764407	chr21:16764407:M	TATATATATATATAATATATATATATGCACATATATATAT	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:7,2:9:9,0,99	0/1:12,11:32:109,0,255
+chr21	16764523	chr21:16764523:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGGTTTTG	<6.2>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/1:12,5:17:41,0,168	0/1:10,5:15:50,0,144
+chr21	16798416	chr21:16798416:M	AAAAAAAAAAAAAAAAAAAAAAAA	<12>,<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,1,4:5:83,94,131,58,69,55,17,17,0,3	0/2:4,0,4,3:11:88,111,252,0,113,90,24,91,24,59	1/2:0,19,2,1:24:255,60,11,255,0,255,255,25,255,255
+chr21	16818070	chr21:16818070:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:20:0,56,255	0/1:7,9:18:210,0,146	0/1:7,13:25:255,0,141
+chr21	16823200	chr21:16823200:M	TTCTCTTCTTTCTTCTTTCTTCTTTCTT	<1.8>	.	.	Motif=TTCT	GT:AD:DP:PL	0/0:35,4:39:0,11,255	0/1:10,12:22:254,0,191	0/1:20,13:33:247,0,255
+chr21	16825838	chr21:16825838:M	TATAGATATAGATAGATAGAGATATAGATATAGATACAGATATATAGATATAGATATA	<8.7>	.	.	Motif=TATAGA	GT:AD:DP:PL	0/1:11,10:21:130,0,149	0/1:8,7:15:82,0,100	0/0:20,0:20:0,59,255
+chr21	16829173	chr21:16829173:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,3:3:88,9,0	1/1:0,4:5:107,4,0
+chr21	16856678	chr21:16856678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:44:0,129,255	0/1:27,16:45:159,0,255	0/0:44,2:47:0,102,255
+chr21	16860273	chr21:16860273:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:2,32:34:255,65,0	1/1:2,41:43:255,90,0
+chr21	16860874	chr21:16860874:M	TTTTCTTTTTTTTTTTTTTTTTT	<22>,<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,8,1,4:17:213,86,82,191,49,255,137,0,216,233	2/3:3,2,6,8:21:204,198,255,64,64,83,16,39,0,85	1/3:2,10,1,6:23:255,120,120,255,79,255,173,0,255,255
+chr21	16866229	chr21:16866229:M	AAAAAAGAAAAAACAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:25:151,0,170	0/1:15,13:28:148,0,183	0/1:11,22:34:255,0,101
+chr21	16879285	chr21:16879285:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:8:224,24,0	1/1:0,24:25:255,72,0	1/1:0,4:5:126,15,0
+chr21	16880537	chr21:16880537:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,18:31:248,0,128	1/1:3,24:30:255,35,0	0/1:13,15:29:193,0,147
+chr21	16907243	chr21:16907243:M	AAAAATTAAAAATAAAAAAAAATAAAAATAAAAA	<5.5>	.	.	Motif=AAAAAT	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,15:15:255,45,0	1/1:0,24:24:255,72,0
+chr21	16907529	chr21:16907529:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:32:0,91,255	0/1:18,10:29:99,0,228	0/0:23,0:25:0,73,255
+chr21	16920035	chr21:16920035:M	TGTGTGTGTGT	<15.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:23,0,9:35:181,225,255,0,255,255	0/0:49,0,0:49:0,147,255,147,255,255	1/2:0,12,8:23:255,229,188,255,0,255
+chr21	16925983	chr21:16925983:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAAA	<42>,<43>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4,0:4:113,12,0,80,12,69	2/2:0,0,1:2:15,16,17,2,3,0	2/2:0,0,6:6:102,102,102,18,18,0
+chr21	16929294	chr21:16929294:M	TGAATGAATGAATGAATGAATGAA	<7>	.	.	Motif=TGAA	GT:AD:DP:PL	0/1:9,14:23:202,0,106	0/0:15,0:15:0,44,255	1/1:0,19:19:255,56,0
+chr21	16930625	chr21:16930625:M	TTTTTTTTTTTTTTGTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,1,16:42:255,255,255,0,255,255	0/0:24,0,0:26:0,75,255,75,255,255	1/2:0,23,16:40:255,255,170,255,0,255
+chr21	16930715	chr21:16930715:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:27:214,0,129	0/0:30,1:33:0,78,255	1/1:3,39:43:255,71,0
+chr21	16931315	chr21:16931315:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:33:0,54,255	0/0:29,2:31:0,59,255	1/1:0,6:8:91,17,0
+chr21	16937042	chr21:16937042:M	ATTTCTATTTCTATTTTTATTT	<3>	.	.	Motif=ATTTCT	GT:AD:DP:PL	0/0:42,2:44:0,83,255	0/1:31,5:36:15,0,255	0/1:13,6:19:86,0,255
+chr21	16941111	chr21:16941111:M	TTGTTTTTTTTTTTTTTTTGCTTTTGTTTTTGTTTTT	<6.3>	.	.	Motif=TTGTTT	GT:AD:DP:PL	0/0:6,1:8:0,4,104	0/0:8,1:11:0,12,148	0/1:7,3:10:27,0,104
+chr21	16941750	chr21:16941750:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:29,2:34:0,64,255	0/1:18,18:37:218,0,219
+chr21	16957263	chr21:16957263:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:46,6:52:0,45,255	0/0:31,0:31:0,91,255	0/1:14,18:33:229,0,150
+chr21	16970937	chr21:16970937:M	ATAATATAATATATTGTACATATTACATACTATAATATATTGTACATATTACATAACATAATATATTGTACATATTACATAATATAATATA	<2.6>	.	.	Motif=ATAAT	GT:AD:DP:PL	1/1:0,3:3:108,9,0	.	1/1:0,1:1:36,3,0
+chr21	16971741	chr21:16971741:M	ACATAACATAA	<1.8>	.	.	Motif=ACATA	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/0:9,0:9:0,27,243	0/1:6,3:9:54,0,135
+chr21	16975449	chr21:16975449:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:231,0,213	1/1:2,18:21:255,26,0	0/1:20,15:36:175,0,255
+chr21	16977305	chr21:16977305:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<18>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,24,0:24:255,72,0,255,71,255	1/1:0,20,1:21:255,63,0,255,44,255	1/2:0,15,12:27:255,220,142,255,0,198
+chr21	16996795	chr21:16996795:M	AGAGAGAGAGATAGAGAGAGAGAGA	<13.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/0:35,0:35:0,103,255	0/1:17,19:36:246,0,209
+chr21	17004191	chr21:17004191:M	TTTTTTTTTTTTTCTTTCTTTCTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:34:255,99,0	0/1:13,9:23:177,0,255	1/1:0,41:43:255,126,0
+chr21	17010741	chr21:17010741:M	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<17.2>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,3:5:70,4,0	0/0:0,0:4:0,2,4	1/1:0,1:3:38,3,0
+chr21	17010817	chr21:17010817:M	GGAGGGAAGGGGAGGGGATGGGAGGGGAGGGAAGGGAAGGG	<7.2>	.	.	Motif=GGAGG	GT:AD:DP:PL	1/1:0,18:19:255,42,0	1/1:0,15:15:253,44,0	0/1:6,10:16:126,0,56
+chr21	17021336	chr21:17021336:M	TCTCTCTCTCTTTCTCTCTCTCTCTCTC	<12>	.	.	Motif=TC	GT:AD:DP:PL	0/0:16,1:18:0,24,255	0/1:16,14:39:255,0,255	0/0:35,0:36:0,108,255
+chr21	17022773	chr21:17022773:M	AATAATAATAATAATAATAATAATAATGATAATAATAATAATAATAAT	<18>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/0:14,0:14:0,42,255	0/1:8,12:21:255,0,168
+chr21	17027733	chr21:17027733:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:155,18,0	1/1:0,6:8:195,23,0	0/1:2,1:5:12,0,65
+chr21	17031911	chr21:17031911:M	GAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAAT	<11.8>,<14.8>	.	.	Motif=GAATA	GT:AD:DP:PL	1/2:0,2,6:10:230,160,149,69,0,51	1/1:0,16,0:16:255,48,0,255,48,255	2/2:0,0,11:11:255,255,255,33,33,0
+chr21	17036135	chr21:17036135:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,2:37:0,72,255	0/0:13,0:16:0,46,255	0/1:12,8:21:78,0,158
+chr21	17040295	chr21:17040295:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,13:15:255,255,253,39,43,0	1/2:0,13,9:24:255,152,96,218,0,155	0/2:4,1,7:16:168,97,206,0,98,96
+chr21	17046109	chr21:17046109:M	ATATTATATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:31,13:44:128,0,255	1/1:0,24:24:255,71,0	0/0:40,0:40:0,118,255
+chr21	17046773	chr21:17046773:M	TCTTTTCTATCTTTTCTTTT	<2.2>	.	.	Motif=TCTTT	GT:AD:DP:PL	0/1:10,30:40:255,0,153	1/1:0,42:42:255,126,0	0/0:21,0:21:0,63,255
+chr21	17046900	chr21:17046900:M	TTTTTCTTTTTCTTTTTTTTTTTTTGTTTTTTTGTTTTTT	<41>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:18,0,125	0/0:17,0:17:0,50,255	0/1:2,5:7:67,0,14
+chr21	17069141	chr21:17069141:M	TATATATATATATATATACACATATATATGTGTGTATATATATATACATATATATATATATATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,13:17:255,2,0	1/1:0,23:27:255,81,0	.
+chr21	17082939	chr21:17082939:M	CACACACACAGACACACGCACACACACAGACACACGCGCACACACACACACAC	<28.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/0:12,0:12:0,36,255	0/1:8,5:15:113,0,180
+chr21	17085170	chr21:17085170:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:5:180,14,0	1/1:0,1:1:28,3,0	1/1:0,0:3:34,8,0
+chr21	17085264	chr21:17085264:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	0/2:4,2,7:15:162,50,116,0,81,99	0/0:2,0,0:4:0,9,55,9,60,71	1/1:0,5,1:7:113,18,0,58,8,49
+chr21	17085319	chr21:17085319:M	TATCTATCTATCTATCTATCTAT	<6.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/0:9,0:9:0,27,174	.	0/1:9,14:23:195,0,101
+chr21	17087610	chr21:17087610:M	GAAGAAAAAGAAGAAGAAAAGAAGAGGAAGAAGAAAAAGGAGGAGGAGGAGGGGAAGGAGAAGAATTATAAGAAGAAAAGAAGAGCAAGAGGAAGAAGAAG	<13>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,9:10:255,27,0	1/1:0,7:10:248,21,0
+chr21	17096524	chr21:17096524:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,20:37:255,0,191	0/1:17,21:39:255,0,187	0/1:26,27:53:255,0,255
+chr21	17100349	chr21:17100349:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<29>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6:10:142,74,145,84,0,67	2/2:0,0,2:2:24,30,59,6,6,0	1/2:0,1,0:3:40,16,13,23,0,18
+chr21	17100380	chr21:17100380:M	AATAATAATAATAATAATAATAATAAT	<8>,<11.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/2:4,0,4:15:104,80,126,0,18,103	0/1:7,0,0:9:4,0,83,29,108,217	1/2:0,13,1:17:220,52,16,204,0,255
+chr21	17112081	chr21:17112081:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,16,0:20:255,255,217,55,1,0,255,228,54,255	2/3:1,1,20,8:30:255,255,255,94,124,56,255,253,0,253	1/2:3,11,13,0:29:255,134,149,112,0,121,255,148,160,255
+chr21	17116180	chr21:17116180:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,10:12:142,0,0	0/1:8,9:19:117,0,80	1/1:2,10:13:139,0,0
+chr21	17116493	chr21:17116493:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,3:12:255,49,16,124,0,94	1/1:0,4,0:4:120,12,0,73,12,62	2/2:0,0,0:4:0,0,0,0,0,0
+chr21	17118409	chr21:17118409:M	AAAAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,3,28:32:255,255,255,95,40,0	0/2:6,1,8:15:194,117,254,0,145,136	1/2:0,21,18:41:255,255,195,255,0,255
+chr21	17120247	chr21:17120247:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,20:35:255,0,169	0/0:25,2:28:0,46,255	0/1:19,17:36:205,0,241
+chr21	17127850	chr21:17127850:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:40:255,118,0	0/1:21,15:37:167,0,255	1/1:3,49:55:255,104,0
+chr21	17130693	chr21:17130693:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,55:55:255,163,0	0/1:32,20:52:212,0,255	1/1:0,58:58:255,171,0
+chr21	17135247	chr21:17135247:M	AAAAAAAGAAAGAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	0/1:16,9:25:87,0,210	1/1:0,36:37:255,109,0
+chr21	17138814	chr21:17138814:M	GAAGGAAGGAAGGAAGGAAGGAAG	<10>,<11>,<12>	.	.	Motif=GAAG	GT:AD:DP:PL	1/2:0,6,6,0:12:255,114,80,114,0,80,255,98,114,255	0/1:21,9,0,0:30:179,0,255,161,255,255,238,255,255,255	2/3:0,0,8,11:19:255,255,255,204,203,150,149,127,0,94
+chr21	17138835	chr21:17138835:M	AAGCAAGAAAGCAAGC	<3>	.	.	Motif=AAGC	GT:AD:DP:PL	1/1:0,26:26:255,76,0	0/1:21,20:41:198,0,215	1/1:0,34:34:255,99,0
+chr21	17143208	chr21:17143208:M	GTGTGTGTGTGTGTGTGTGT	<12>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,14:30:255,0,255	0/0:39,0:40:0,120,255	0/1:15,13:30:255,0,255
+chr21	17144737	chr21:17144737:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:45:0,132,255	0/0:29,0:31:0,90,255	0/1:27,19:46:213,0,255
+chr21	17145268	chr21:17145268:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:31:255,72,0	0/1:15,10:27:105,0,192	1/1:0,31:31:255,91,0
+chr21	17146907	chr21:17146907:M	TGTTTTTTGTTTGTTTTTTTG	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,17:18:174,45,0	0/1:14,5:19:1,0,94	1/1:0,20:21:205,52,0
+chr21	17146930	chr21:17146930:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:10:222,21,0	0/0:4,0:5:0,12,127	1/1:0,5:6:185,10,0
+chr21	17168174	chr21:17168174:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:41:244,0,255	0/1:19,15:34:170,0,242	0/1:26,12:39:109,0,255
+chr21	17170900	chr21:17170900:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,3:34:0,45,255	0/0:36,4:40:0,47,255	0/1:23,31:59:255,0,254
+chr21	17174288	chr21:17174288:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:81,0,12	0/0:5,0:6:0,17,93	0/1:3,4:10:57,0,32
+chr21	17175314	chr21:17175314:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:44:0,111,255	0/0:42,1:44:0,111,255	0/1:28,20:50:228,0,255
+chr21	17176332	chr21:17176332:M	AAAAAAAAAAAAAAAAAGAAAAA	<17>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,15:19:216,255,255,0,72,16	0/2:3,0,14:17:190,237,255,0,52,2	1/1:2,20,0:24:255,9,0,255,37,255
+chr21	17178914	chr21:17178914:M	AAAAAAAAAAAAAAAAAAA	<13>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,13,11:25:255,255,255,201,202,131,227,226,0,154	0/2:8,0,11,0:23:255,255,255,0,253,220,193,255,254,255	1/3:0,20,0,8:29:255,249,190,255,146,255,255,0,255,255
+chr21	17186567	chr21:17186567:M	AAAAAAAAAAGAAAAAAGAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:28:248,0,255	1/1:0,22:25:255,66,0	0/1:17,15:32:255,0,255
+chr21	17197324	chr21:17197324:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:37:0,71,255	0/0:40,1:42:0,105,255	0/1:30,20:50:218,0,255
+chr21	17199969	chr21:17199969:M	ACACACACAGACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,17:36:255,0,255	0/0:33,0:33:0,99,255	1/1:2,28:32:255,43,0
+chr21	17224632	chr21:17224632:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<16.5>,<19.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4,0:5:122,12,0,121,11,120	1/1:0,3,0:3:92,9,0,92,9,92	2/2:0,0,3:4:91,91,91,10,10,0
+chr21	17235566	chr21:17235566:M	AAAAAATAAAAAAAAAAAAAGAAAGAAAAGAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,81,255	0/0:29,0:29:0,87,255	0/1:10,9:21:179,0,208
+chr21	17237590	chr21:17237590:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:47,2:51:0,114,255	0/1:20,17:39:209,0,255
+chr21	17254117	chr21:17254117:M	AAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:9:42,0,129	0/1:0,1:2:23,0,6	0/1:2,3:6:76,0,41
+chr21	17254229	chr21:17254229:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,2:44:0,91,255	0/1:16,16:32:197,0,195	0/1:19,28:47:255,0,218
+chr21	17262071	chr21:17262071:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20:37:255,0,179	0/1:15,15:31:181,0,174	0/0:37,0:38:0,111,255
+chr21	17266847	chr21:17266847:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,88,0	0/1:15,13:28:145,0,180	1/1:1,33:35:255,82,0
+chr21	17278372	chr21:17278372:M	AAAAAAAAAAAGAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,98,0	0/1:20,22:43:255,0,231	1/1:0,50:50:255,147,0
+chr21	17279810	chr21:17279810:M	GGGGGGGGGGGGG	<10>,<11>,<12>	.	.	Motif=G	GT:AD:DP:PL	1/3:0,9,0,7:16:255,107,135,229,106,203,227,0,139,199	3/3:0,0,0,4:5:49,63,109,52,74,63,3,13,12,0	1/2:0,9,5,0:14:255,77,37,140,0,99,255,64,138,255
+chr21	17283477	chr21:17283477:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:145,16,0	0/1:7,12:24:129,0,82	1/1:2,11:16:153,3,0
+chr21	17284947	chr21:17284947:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,45:45:255,131,0	0/1:12,22:34:248,0,91	1/1:0,35:35:255,102,0
+chr21	17289553	chr21:17289553:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,11:16:149,0,34	0/0:10,2:13:0,4,144	0/1:10,10:26:146,0,109
+chr21	17291500	chr21:17291500:M	TTTTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,12:24:255,218,255,254,0,212	0/1:6,14,0:21:255,0,115,255,102,255	1/2:2,14,8:27:255,110,182,255,0,255
+chr21	17305413	chr21:17305413:M	TTTTTATTTTTTTATTTTTTTTTTTTAATTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,11:22:255,199,137,200,0,137	0/2:8,0,9:17:210,154,255,0,209,183	1/2:0,4,8:12:255,141,108,71,0,37
+chr21	17308259	chr21:17308259:M	AAAAAAAAAAAAAACAAAAAAAAACAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:7,17:25:255,0,136	1/1:0,30:33:255,98,0
+chr21	17317336	chr21:17317336:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,4:10:178,68,67,54,0,34	0/2:3,0,3:7:64,51,130,0,80,66	1/2:0,10,3:16:255,51,15,181,0,144
+chr21	17321418	chr21:17321418:M	AAAAAATAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,10:22:111,0,127	0/1:25,5:31:2,0,255	0/1:6,15:24:205,0,34
+chr21	17326063	chr21:17326063:M	ACACACACACACACACACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,13:15:255,44,0	1/1:0,14:17:255,50,0	1/1:0,19:20:255,60,0
+chr21	17333813	chr21:17333813:M	TATATATATATATATATATAGTATATATATAGTATA	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,38:38:255,112,0	0/1:2,2:4:24,0,24	1/1:0,16:17:255,50,0
+chr21	17335836	chr21:17335836:M	TTTTTCTTTTCTTTTTCTCTTTCTTTTTTTTTTTTTTTTTTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:112,12,0	.	1/1:0,2:4:69,9,0
+chr21	17336845	chr21:17336845:M	AAATAAATAAATAAATAAATAAA	<6.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,20:41:137,0,79	0/0:18,0:25:0,58,238	0/1:10,5:22:9,0,96
+chr21	17337857	chr21:17337857:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:6,14:23:255,0,122	0/1:19,8:33:140,0,255	0/1:15,8:27:173,0,255
+chr21	17349582	chr21:17349582:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,22:39:255,0,255	0/1:10,14:28:255,0,199	0/1:22,10:37:180,0,255
+chr21	17352726	chr21:17352726:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,15:21:255,0,21	0/1:3,11:18:255,0,41	0/1:5,16:23:255,0,82
+chr21	17354984	chr21:17354984:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,29:45:255,0,157	0/1:13,13:27:161,0,151	0/1:16,26:45:255,0,170
+chr21	17357071	chr21:17357071:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:26,15:41:75,0,215	0/1:20,14:34:79,0,153	0/1:20,21:41:149,0,137
+chr21	17358528	chr21:17358528:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTATGTGTGCGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,19:35:253,0,186	0/1:8,12:20:154,0,83	0/1:11,9:20:105,0,142
+chr21	17361803	chr21:17361803:M	AAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:21:255,0,125	0/0:12,0:17:0,50,255	0/1:2,10:14:255,0,35
+chr21	17362108	chr21:17362108:M	AAAAAAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,13,7:25:255,70,164,255,0,255	2/2:2,0,20:24:255,255,255,26,68,0	1/2:1,21,7:34:255,110,124,255,0,255
+chr21	17362535	chr21:17362535:M	AAAATTAAAATT	<1.8>	.	.	Motif=AAAATT	GT:AD:DP:PL	0/1:19,19:39:255,0,255	1/1:0,32:32:255,96,0	0/1:14,21:35:255,0,214
+chr21	17364310	chr21:17364310:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<11>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,8,7:15:246,133,161,151,0,189	0/2:3,0,6:9:83,108,203,0,46,28	1/2:0,13,9:22:255,165,193,240,0,255
+chr21	17367127	chr21:17367127:M	AAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,3:6:65,52,89,0,52,69	0/1:1,5,1:8:71,0,4,54,7,83	0/1:2,2,0:7:18,0,40,20,43,85
+chr21	17367301	chr21:17367301:M	AAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2,0:4:65,7,0,42,6,36	2/2:0,1,7:8:236,125,102,24,6,0	1/2:0,3,1:7:143,27,9,71,0,56
+chr21	17369908	chr21:17369908:M	ATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,9:25:154,0,183	0/0:16,0:16:0,48,255	0/1:21,13:41:199,0,255
+chr21	17369929	chr21:17369929:M	TATATATATATA	<7>,<8>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,1,3:4:78,38,27,11,0,2	1/1:1,5,0:6:50,4,0,53,17,74	0/2:26,0,4:30:11,44,255,0,255,255
+chr21	17369969	chr21:17369969:M	TATATATATATATACATGTATATATATATATAT	<4.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,12:15:255,0,32	1/1:0,10:12:255,36,0	0/1:22,7:29:248,0,255
+chr21	17371646	chr21:17371646:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,11:31:255,171,111,255,0,255	1/1:0,30,0:31:255,93,0,255,91,255	0/2:18,2,8:28:82,86,255,0,255,242
+chr21	17372825	chr21:17372825:M	AAGAAGAAGAAGAAGAAGAAGAAG	<7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,40:41:255,119,0	0/1:15,23:38:255,0,170
+chr21	17375206	chr21:17375206:M	AGAGACAGAGACA	<1.8>	.	.	Motif=AGAGAC	GT:AD:DP:PL	0/1:21,6:27:87,0,255	1/1:0,37:37:255,111,0	0/0:47,0:47:0,141,255
+chr21	17381934	chr21:17381934:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>,<8.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,16,0,7:23:255,127,150,255,193,255,255,0,255,255	1/1:0,14,0,0:14:255,42,0,255,41,243,255,42,255,255	2/3:0,0,12,7:19:255,255,255,123,196,156,212,212,0,255
+chr21	17384220	chr21:17384220:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:143,18,0	.	0/1:14,17:33:255,0,255
+chr21	17384974	chr21:17384974:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,21,26:48:255,255,255,255,0,255	2/2:1,0,37:38:255,255,255,94,111,0	1/1:3,36,0:39:255,59,0,255,108,255
+chr21	17387683	chr21:17387683:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23,0:41:255,0,255,255,255,255	1/2:1,14,12:28:255,191,141,214,0,165	0/0:48,0,0:50:0,150,255,150,255,255
+chr21	17387964	chr21:17387964:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,14:42:146,0,255	0/0:25,0:27:0,78,255	0/1:19,13:33:139,0,255
+chr21	17391508	chr21:17391508:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,12:16:161,0,22	0/1:5,9:15:106,0,48	0/1:17,9:26:77,0,213
+chr21	17401499	chr21:17401499:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:22:93,0,160	1/1:1,35:41:255,89,0	0/0:27,2:30:0,51,255
+chr21	17407281	chr21:17407281:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,44:44:255,129,0	1/1:0,47:47:255,138,0
+chr21	17411233	chr21:17411233:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:16:0,47,255	0/1:5,8:13:98,0,47	0/0:15,1:17:0,32,255
+chr21	17422621	chr21:17422621:M	TTTGTTTGTTTGTTGTTTGTTGTTTTTTTTTTGT	<8.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:2,32:35:255,57,0	1/1:0,20:20:255,60,0
+chr21	17422802	chr21:17422802:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,12,0:35:125,0,255,194,255,255	1/2:0,13,8:21:255,141,81,195,0,171	0/0:33,1,0:35:0,84,255,102,255,255
+chr21	17423415	chr21:17423415:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:29:255,66,0	1/1:2,24:26:255,41,0	1/1:3,32:35:255,49,0
+chr21	17423597	chr21:17423597:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,5:16:42,0,148	0/0:18,0:18:0,53,255	0/1:18,4:23:3,0,254
+chr21	17425955	chr21:17425955:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,35:37:255,72,0	1/1:1,35:37:255,91,0	1/1:1,47:48:255,123,0
+chr21	17426908	chr21:17426908:M	AATAAATAAATAAATAAATAAATAAATAAATAA	<10.2>,<11.2>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,7,9:16:255,173,128,134,0,89	1/1:0,16,0:16:255,48,0,255,47,255	2/2:0,0,21:21:255,255,255,63,62,0
+chr21	17428199	chr21:17428199:M	TTTTTCTTTTTTTTTCTTTTTTTTT	<26>,<27>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,2:4:79,35,24,30,0,24	0/1:2,4,0:7:47,0,24,56,42,117	1/2:0,4,5:9:181,85,61,58,0,43
+chr21	17428635	chr21:17428635:M	AGTGCAGTGGAGTGCAGTGGAGTGCAGTGGAGTGCAGTGAAGTG	<6.8>	.	.	Motif=AGTGC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,26:26:255,78,0	1/1:0,32:32:255,96,0
+chr21	17429806	chr21:17429806:M	AAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,19:29:255,255,255,105,0,71	1/1:0,19,0:19:255,57,0,255,56,255	2/2:0,0,37:37:255,255,255,111,109,0
+chr21	17432731	chr21:17432731:M	GAAGGAAGGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGAAGG	<10.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:1,2:6:52,0,11	0/1:1,3:4:61,0,13	0/0:12,1:15:0,18,255
+chr21	17433559	chr21:17433559:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,43,0:43:255,129,0,255,127,255	1/1:0,34,0:36:255,108,0,255,105,255	1/2:0,17,13:30:255,200,149,255,0,222
+chr21	17434908	chr21:17434908:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAA	<41>,<42>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,10:13:255,187,153,38,2,0	2/2:0,0,9:10:255,178,154,26,26,0	1/2:0,7,6:13:255,105,67,123,0,85
+chr21	17436178	chr21:17436178:M	GGAAGGAAGGAAGGAAGGAAGGAAGG	<4.5>,<5.5>	.	.	Motif=GGAA	GT:AD:DP:PL	2/2:2,0,5:8:37,30,60,0,11,0	1/2:0,1,5:7:67,38,32,19,0,1	0/1:1,3,0:5:60,0,5,37,8,35
+chr21	17436201	chr21:17436201:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGAGAGG	<8>,<13>	.	.	Motif=AGGG	GT:AD:DP:PL	1/2:0,0,2:3:53,46,46,9,0,5	1/1:0,3,0:3:90,9,0,90,9,90	2/2:0,0,3:3:75,78,81,9,9,0
+chr21	17439342	chr21:17439342:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,11:28:255,207,128,255,0,243	1/1:1,32,1:34:255,82,0,255,82,255	0/2:26,0,22:48:255,255,255,0,255,255
+chr21	17440352	chr21:17440352:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,35:37:255,108,0	0/1:20,16:37:255,0,255
+chr21	17441929	chr21:17441929:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,24:26:255,48,0	1/1:2,26:30:255,52,0	0/1:28,14:45:153,0,255
+chr21	17443967	chr21:17443967:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTG	<21>,<27>,<28>,<29>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,7,3,7:18:255,255,255,202,203,168,178,198,79,149,126,199,0,75,162	3/4:0,0,0,4,6:10:255,255,255,223,224,207,98,98,97,69,65,66,54,0,36	1/2:1,11,2,0,0:17:255,6,34,255,0,255,255,45,255,255,255,68,255,255,255
+chr21	17454010	chr21:17454010:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,3,0,3:7:168,81,70,106,53,89,84,0,53,73	1/2:0,0,3,0:4:97,51,40,11,0,1,63,42,11,54	1/3:0,1,1,2:4:93,54,48,37,20,26,30,0,3,21
+chr21	17456517	chr21:17456517:M	AAAAAAAAAAAGAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,18,18:39:255,255,233,248,0,243	0/2:19,0,13:34:255,224,255,0,255,255	1/2:0,16,9:26:255,170,99,246,0,216
+chr21	17456963	chr21:17456963:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,24:24:255,71,0	1/1:1,35:36:255,88,0
+chr21	17457248	chr21:17457248:M	TTTTTTGTTTTTTGGTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,56,0	1/1:0,21:21:255,62,0	1/1:0,26:26:255,76,0
+chr21	17461784	chr21:17461784:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,7:8:212,124,102,24,6,0	1/2:1,1,5:9:144,54,59,10,0,16	1/2:0,3,5:10:204,83,68,48,0,24
+chr21	17462831	chr21:17462831:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,34:34:255,100,0	1/1:0,38:39:255,114,0
+chr21	17463131	chr21:17463131:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,6,0:8:159,0,5,112,17,111	1/2:1,3,5:11:135,53,67,43,0,33	1/2:3,8,5:18:228,22,66,101,0,107
+chr21	17464192	chr21:17464192:M	TTTTTTTGTTTTTGTTTTGTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:16:82,0,119	0/0:27,0:29:0,84,255	0/1:9,12:23:158,0,104
+chr21	17465277	chr21:17465277:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,19:38:243,0,243	0/0:25,1:27:0,51,255	0/1:12,20:32:255,0,124
+chr21	17466224	chr21:17466224:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,14:38:164,0,255	0/0:55,0:55:0,162,255	0/1:21,15:36:180,0,255
+chr21	17468375	chr21:17468375:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:71,12,0	0/1:3,8:13:115,0,15	1/1:1,6:10:119,9,0
+chr21	17470402	chr21:17470402:M	TTTTTTTTTTTTTTTTTTTTGTCTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:11:255,32,0	1/1:0,6:6:167,18,0	1/1:0,9:9:245,27,0
+chr21	17471023	chr21:17471023:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:1,17:20:255,41,0	1/1:2,12:15:179,9,0
+chr21	17476109	chr21:17476109:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,10:23:120,185,255,0,206,176	1/2:1,15,10:29:255,166,219,255,0,255	0/0:29,0,0:29:0,85,255,85,255,255
+chr21	17477581	chr21:17477581:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:25:138,0,151	0/0:13,1:18:0,34,252	0/1:18,4:22:7,0,255
+chr21	17478343	chr21:17478343:M	TTATTTATTTATTTAATTAATTAATTAATTTATTTATTTATTTATTT	<12.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:18,0:18:0,53,255	0/1:9,3:12:21,0,134
+chr21	17482556	chr21:17482556:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<11.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:6,7,0:14:105,0,75,142,99,255	0/1:4,4,0:8:49,0,49,71,61,162	0/2:4,0,3:7:36,55,141,0,64,55
+chr21	17484141	chr21:17484141:M	ATATATATATATATATATTTATATATATAT	<10>,<10.5>,<11>,<12>,<17>	.	.	Motif=AT	GT:AD:DP:PL	1/5:0,4,0,0,0,5:11:214,105,126,131,136,153,168,140,164,191,213,141,167,203,241,106,0,26,62,107,102	2/4:0,0,3,0,7,1:12:249,163,159,106,116,95,90,97,81,78,37,14,0,13,24,228,139,82,66,13,226	1/3:0,8,0,8,0,0:17:255,110,60,88,27,37,121,0,35,72,255,87,84,118,255,255,110,88,121,255,255
+chr21	17485034	chr21:17485034:M	TTTGTTTTTGTTTTTTTTTGTTTTGTTTTGTTTT	<6.6>	.	.	Motif=TTTGT	GT:AD:DP:PL	0/1:17,9:26:130,0,255	0/1:11,10:21:166,0,181	1/1:0,23:23:255,69,0
+chr21	17485435	chr21:17485435:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,22:39:255,0,185	0/1:14,18:32:225,0,155	0/0:43,1:46:0,117,255
+chr21	17486649	chr21:17486649:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:13:70,0,70	0/0:5,1:6:0,1,68	0/1:6,10:17:125,0,65
+chr21	17487433	chr21:17487433:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,1,15,5:21:255,255,255,76,71,28,255,206,0,217	1/2:0,5,21,0:26:255,255,255,86,0,9,255,255,84,255	1/3:0,9,1,10:22:255,175,233,255,157,255,255,0,149,218
+chr21	17487622	chr21:17487622:M	ACACACACACATACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:31:255,92,0	0/1:20,17:37:201,0,254	0/1:16,16:32:207,0,207
+chr21	17490960	chr21:17490960:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,5:13:251,90,53,123,0,108	1/1:2,10,1:13:150,3,0,130,20,178	1/2:0,2,8:11:225,134,113,23,0,7
+chr21	17500028	chr21:17500028:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:1,18:22:255,44,0	1/1:0,16:18:255,52,0
+chr21	17502090	chr21:17502090:M	TTTTCTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:10,3,0	0/1:1,3:5:45,0,2	1/1:0,0:2:20,5,0
+chr21	17504104	chr21:17504104:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:9,0,168	0/0:3,0:4:0,11,61	0/1:7,3:12:17,0,108
+chr21	17504994	chr21:17504994:M	AAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,7:10:251,118,90,51,0,22	2/2:0,2,13:17:255,246,203,50,16,0	2/2:0,2,14:16:255,246,202,47,13,0
+chr21	17505810	chr21:17505810:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:27:153,0,162	0/1:15,14:31:156,0,182	0/0:33,2:36:0,62,255
+chr21	17506009	chr21:17506009:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,42:42:255,123,0	1/1:0,43:45:255,132,0
+chr21	17507648	chr21:17507648:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:31:255,86,0	1/1:0,8:10:213,27,0	0/1:1,4:5:86,0,10
+chr21	17508972	chr21:17508972:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:73,7,0	1/1:0,3:4:37,0,0	0/1:0,2:3:24,0,2
+chr21	17511372	chr21:17511372:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,27:29:255,255,255,85,49,0	1/2:0,17,14:31:255,204,152,255,0,206	1/2:1,23,19:44:255,255,226,255,0,255
+chr21	17514566	chr21:17514566:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:0,41:41:255,120,0	1/1:2,52:55:255,125,0
+chr21	17514638	chr21:17514638:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,2:37:0,64,255	0/0:29,2:31:0,56,255	0/1:23,16:42:175,0,255
+chr21	17514974	chr21:17514974:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,19:48:216,0,255	0/0:44,1:46:0,117,255	0/0:47,0:47:0,139,255
+chr21	17524029	chr21:17524029:M	TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/0:9,0:11:0,32,182	0/1:10,11:22:141,0,122
+chr21	17529035	chr21:17529035:M	TTTTTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,9,94	0/0:3,0:4:0,12,125	1/1:1,13:14:255,11,0
+chr21	17530115	chr21:17530115:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9,0:9:156,26,0,156,26,156	1/1:0,4,0:4:66,12,0,66,12,66	1/2:1,2,5:8:131,67,62,12,0,22
+chr21	17531299	chr21:17531299:M	AAAAAAAAAAAAAGAAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,88,255	0/0:22,0:23:0,57,255	0/1:7,9:19:126,0,80
+chr21	17531938	chr21:17531938:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:26:0,64,255	0/1:11,18:31:199,0,72	0/0:36,2:43:0,88,255
+chr21	17534790	chr21:17534790:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6:18:58,0,142	1/1:2,18:21:255,27,0	0/1:12,7:22:69,0,166
+chr21	17541618	chr21:17541618:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,8,3:16:189,0,104,98,43,146	2/2:1,1,23:25:255,255,255,56,55,0	0/2:15,3,16:34:223,190,255,0,213,172
+chr21	17545773	chr21:17545773:M	TTTTTTTTGTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:129,0,147	1/1:2,30:32:255,59,0	0/1:15,21:38:255,0,152
+chr21	17550352	chr21:17550352:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,2:14:9,0,255	0/1:2,11:14:246,0,12	0/1:6,4:10:76,0,132
+chr21	17553615	chr21:17553615:M	TTTTTTTTTTTTTTTTTTTCTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,10:15:138,0,37	1/1:0,9:10:165,29,0	0/1:4,7:13:95,0,51
+chr21	17558082	chr21:17558082:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,17:33:255,0,255	1/1:0,46:47:255,138,0	0/1:15,27:43:255,0,255
+chr21	17559670	chr21:17559670:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:8:101,0,10	1/1:0,7:8:188,21,0	1/1:1,8:11:200,1,0
+chr21	17559972	chr21:17559972:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:34:255,0,185	1/1:0,41:43:255,126,0	0/1:22,16:40:199,0,255
+chr21	17565283	chr21:17565283:M	ACACACACACACACACACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,27:43:255,0,255	1/1:0,37:39:255,117,0	0/1:13,22:35:255,0,255
+chr21	17566947	chr21:17566947:M	AAAAAAAAAAAAGAAAGAAAAAGAAAAAAA	<29>,<31>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,9,16:28:255,255,255,152,0,180	2/2:1,0,23:24:255,255,255,53,69,0	1/2:4,14,16:37:255,228,255,194,0,255
+chr21	17567863	chr21:17567863:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:44:244,0,255	1/1:1,27:28:255,65,0	0/1:13,18:31:236,0,145
+chr21	17568126	chr21:17568126:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:9:108,8,0	0/1:2,4:6:49,0,16	0/1:3,4:8:57,0,28
+chr21	17568558	chr21:17568558:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,16,5:24:255,42,76,240,0,255	1/1:3,29,0:35:255,48,0,255,93,255	1/2:2,17,9:28:255,125,172,255,0,255
+chr21	17569360	chr21:17569360:M	TATATATTATATATATATATGTACATATAT	<16>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,16:33:210,0,228	0/0:16,0:17:0,47,255	0/1:12,14:26:185,0,148
+chr21	17572208	chr21:17572208:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,54,0	1/1:1,9:13:230,2,0	1/1:1,21:23:255,37,0
+chr21	17574999	chr21:17574999:M	ACATACATACATACATACATACATACATACATACATACATACATACATACATA	<10.8>,<12.2>	.	.	Motif=ACAT	GT:AD:DP:PL	1/2:0,11,9:20:255,171,244,255,0,255	1/1:0,23,0:25:255,75,0,255,74,255	1/2:0,17,16:33:255,255,255,255,0,255
+chr21	17575493	chr21:17575493:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,14:24:255,0,203	1/1:0,15:16:255,48,0	0/1:19,13:34:248,0,255
+chr21	17576088	chr21:17576088:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,7:15:77,0,86	0/1:11,9:21:87,0,130	0/1:13,8:21:74,0,159
+chr21	17579885	chr21:17579885:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/0:45,1:49:0,125,255	0/1:20,30:51:255,0,216
+chr21	17581848	chr21:17581848:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:212,35,0	1/1:0,7:7:123,21,0	1/1:0,6:7:117,20,0
+chr21	17581921	chr21:17581921:M	GTTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTTGTTT	<9>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,38:38:255,113,0	1/1:0,36:36:255,107,0
+chr21	17586383	chr21:17586383:M	TATATATATATATAATGTGTATATATATATATAATATATATTATATATGTATA	<27.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:1,0:1:0,3,18	0/1:5,7:12:96,0,57
+chr21	17589583	chr21:17589583:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/0:35,1:36:0,88,255	0/1:13,25:39:255,0,138
+chr21	17590229	chr21:17590229:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:31:255,54,0	1/1:2,26:29:255,50,0	1/1:3,27:31:255,37,0
+chr21	17599476	chr21:17599476:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,155	0/0:5,0:6:0,17,95	0/1:3,5:11:68,0,34
+chr21	17608374	chr21:17608374:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:43:0,107,255	0/0:26,0:26:0,76,255	0/1:17,15:32:180,0,215
+chr21	17614103	chr21:17614103:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,39:42:255,86,0	1/1:1,37:39:255,96,0	1/1:2,40:43:255,81,0
+chr21	17616336	chr21:17616336:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7:15:83,0,81	0/1:5,8:14:99,0,47	1/1:0,11:11:193,32,0
+chr21	17625226	chr21:17625226:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,1:48:0,123,255	0/0:47,0:48:0,141,255	0/1:25,20:46:243,0,255
+chr21	17630651	chr21:17630651:M	TTTTTTTTTTTTTTTTTT	<19>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,10,5:18:197,79,84,113,0,255	1/2:3,4,4:11:91,52,76,15,0,124	1/2:2,7,4:18:151,73,86,65,0,183
+chr21	17670334	chr21:17670334:M	TCTCTCTCTCTCTCTCTCTCTC	<10>	.	.	Motif=TC	GT:AD:DP:PL	0/1:13,20:36:255,0,152	0/1:14,21:35:255,0,149	0/0:36,1:37:0,90,255
+chr21	17673720	chr21:17673720:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:163,29,0	1/1:0,8:8:129,23,0	0/0:0,0:1:0,1,3
+chr21	17680037	chr21:17680037:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:14:3,0,142	0/0:10,0:12:0,34,183	0/1:5,4:11:45,0,63
+chr21	17680619	chr21:17680619:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,5:10:103,0,81	0/1:2,4:6:88,0,32	0/0:16,0:16:0,48,255
+chr21	17683821	chr21:17683821:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,7:27:255,83,112,255,0,255	0/1:13,6,0:21:138,0,255,161,172,255	0/2:3,0,6:10:64,81,207,0,39,13
+chr21	17685280	chr21:17685280:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTT	<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:19,18:37:255,0,255	0/1:15,9:26:163,0,255	0/0:46,0:48:0,144,255
+chr21	17692266	chr21:17692266:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,17:45:188,0,255	0/1:18,14:35:152,0,246	0/0:26,2:28:0,46,255
+chr21	17693272	chr21:17693272:M	TTTTTTCTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,11:16:154,0,44	0/1:7,8:16:102,0,75	0/0:22,0:23:0,67,255
+chr21	17693618	chr21:17693618:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:36:161,0,255	0/1:22,18:40:205,0,255	0/0:34,0:34:0,100,255
+chr21	17695717	chr21:17695717:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<5.2>,<11.2>	.	.	Motif=TTAT	GT:AD:DP:PL	1/2:0,19,10:29:255,193,225,255,0,255	0/1:8,20,0:28:255,0,155,255,144,255	0/2:10,0,7:17:83,132,255,0,187,139
+chr21	17698568	chr21:17698568:M	AAAAAAAAAAAGAAAAAAAAAAAAAAA	<19>,<26>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,5,11:25:252,139,255,120,0,109	0/1:6,5,0:16:113,0,149,136,103,221	0/2:7,0,8:21:72,126,255,0,133,83
+chr21	17703520	chr21:17703520:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGT	<22>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,10:21:255,148,115,191,0,133	1/2:0,12,7:19:255,99,63,198,0,146	2/2:0,1,15:16:255,246,243,47,30,0
+chr21	17711021	chr21:17711021:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,13:20:191,0,52	0/1:15,21:36:255,0,156	0/0:27,0:27:0,79,255
+chr21	17718102	chr21:17718102:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:16:139,0,194	0/1:2,7:12:168,0,18	0/0:9,0:11:0,30,253
+chr21	17722214	chr21:17722214:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:8,4:15:41,0,100	0/1:14,4:20:10,0,201
+chr21	17722924	chr21:17722924:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,20:36:255,0,190	0/1:14,23:38:255,0,134	0/0:31,1:33:0,79,255
+chr21	17723595	chr21:17723595:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:27:139,0,177	0/1:13,15:30:172,0,157	0/0:40,1:43:0,105,255
+chr21	17731757	chr21:17731757:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<12.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:2,13:15:216,6,0	0/1:4,2:6:19,0,55	0/1:12,5:17:45,0,175
+chr21	17737310	chr21:17737310:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:38,0,15	0/1:1,1:3:21,0,8	0/1:1,0:2:7,0,11
+chr21	17744946	chr21:17744946:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:6:0,14,80	0/0:15,0:17:0,49,255	0/1:7,3:11:19,0,99
+chr21	17745481	chr21:17745481:M	TTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,6:6:174,18,0	0/0:5,0:6:0,18,147
+chr21	17755233	chr21:17755233:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,3,14:19:255,255,229,48,1,0	2/2:0,0,9:10:255,193,167,30,29,0	1/2:3,6,5:15:177,29,49,29,0,100
+chr21	17756642	chr21:17756642:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:24:255,66,0	1/1:0,13:15:255,42,0	0/1:5,16:21:255,0,71
+chr21	17764534	chr21:17764534:M	ACACACACACACACACACACTCACACACACAC	<17>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,12:32:135,0,255	1/1:1,34:35:255,85,0	0/0:30,0:30:0,89,255
+chr21	17767776	chr21:17767776:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:38:255,0,169	1/1:0,43:43:255,126,0	0/0:34,0:36:0,105,255
+chr21	17786301	chr21:17786301:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:1,4:5:41,0,0	0/1:2,4:8:46,0,8
+chr21	17788586	chr21:17788586:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,35:37:255,72,0	1/1:0,26:26:255,76,0	1/1:3,35:39:255,60,0
+chr21	17789254	chr21:17789254:M	CACACACACACACACACACACACACACACACACA	<12>,<16>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,40,0:40:255,120,0,255,120,255	1/1:0,25,0:25:255,75,0,255,75,255	1/2:0,18,7:25:255,124,131,255,0,255
+chr21	17795005	chr21:17795005:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:18:255,35,0	1/1:1,13:14:202,24,0	0/1:17,7:26:55,0,230
+chr21	17812811	chr21:17812811:M	AAAAAAACAAAAAAAAACAAACAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/0:24,0:24:0,71,255	0/1:11,12:23:153,0,135
+chr21	17821900	chr21:17821900:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:1,15:17:251,32,0	0/1:13,12:26:137,0,163
+chr21	17826778	chr21:17826778:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:28:0,45,255	0/1:8,7:18:77,0,104	0/0:16,2:18:0,17,247
+chr21	17828370	chr21:17828370:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:32:255,83,0	1/1:0,31:32:255,94,0	1/1:2,30:34:255,63,0
+chr21	17833430	chr21:17833430:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:23:0,48,255	0/1:9,4:15:43,0,113	0/0:24,0:25:0,70,255
+chr21	17854771	chr21:17854771:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,26:40:255,0,144	1/1:2,34:38:255,76,0	0/0:33,1:34:0,82,255
+chr21	17858731	chr21:17858731:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,11:34:103,0,255	0/1:3,15:20:214,0,5	0/0:40,1:45:0,110,255
+chr21	17859355	chr21:17859355:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17:39:211,0,255	1/1:0,26:29:255,84,0	0/1:17,21:38:255,0,197
+chr21	17859472	chr21:17859472:M	CTTTCTCTTTCT	<1.8>	.	.	Motif=CTTTCT	GT:AD:DP:PL	0/1:20,20:40:255,0,255	1/1:0,38:38:255,114,0	0/0:33,0:33:0,99,255
+chr21	17863072	chr21:17863072:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,7,0,7:16:255,195,183,255,189,255,108,0,116,174	3/3:0,0,0,17:19:255,255,255,255,255,255,57,57,51,0	1/2:1,11,6,0:18:255,83,48,136,0,144,255,100,193,255
+chr21	17863624	chr21:17863624:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,17,1:43:255,0,255,255,255,255	1/1:0,27,2:31:255,87,0,255,55,255	0/2:11,1,16:29:219,225,255,0,189,127
+chr21	17865546	chr21:17865546:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,16:22:255,0,98	1/1:0,21:24:255,71,0	0/1:3,13:22:255,0,51
+chr21	17879632	chr21:17879632:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,1:2:12,0,6	1/1:0,0:1:1,1,0	0/1:1,4:6:51,0,10
+chr21	17880386	chr21:17880386:M	AAAAAACAAAAAAAAAAAAAAA	<29>,<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:4:92,10,0,61,9,52	2/2:0,0,3:3:89,57,49,9,9,0	1/2:0,4,3:7:181,50,29,66,0,46
+chr21	17882185	chr21:17882185:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:21:255,61,0	1/1:1,16:19:255,38,0	1/1:0,36:37:255,109,0
+chr21	17884241	chr21:17884241:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1:41:0,101,255	0/0:31,1:32:0,76,255	0/1:18,12:31:138,0,238
+chr21	17891086	chr21:17891086:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/0:21,0:24:0,66,255	0/1:5,15:23:231,0,23
+chr21	17896552	chr21:17896552:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,2:53:0,118,255	0/0:33,2:35:0,67,255	0/1:24,18:43:207,0,255
+chr21	17902139	chr21:17902139:M	TTTTTTTTTGTTTTTTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTT	<10.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,14:14:255,41,0	1/1:1,14:15:241,26,0	1/1:0,6:9:112,13,0
+chr21	17905587	chr21:17905587:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:34:224,0,161	1/1:3,25:29:255,34,0	0/1:22,16:39:164,0,255
+chr21	17917877	chr21:17917877:M	GTGTGTGTGTGTGTATGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/0:38,0:38:0,114,255	0/1:9,15:26:255,0,183	0/1:17,12:29:243,0,255
+chr21	17923463	chr21:17923463:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,63,255	0/1:5,5:11:99,0,103	0/1:8,1:10:0,0,187
+chr21	17926377	chr21:17926377:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:27:116,0,165	1/1:0,21:26:255,75,0	0/1:10,10:20:114,0,114
+chr21	17927209	chr21:17927209:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,11:35:54,0,194	0/1:11,9:25:94,0,69	0/0:23,3:26:0,35,252
+chr21	17929817	chr21:17929817:M	GGAGGGAGTGGGGAGGGAG	<2>	.	.	Motif=GGAG	GT:AD:DP:PL	0/0:38,2:40:0,65,255	0/1:13,22:35:255,0,254	0/1:16,17:33:255,0,255
+chr21	17934227	chr21:17934227:M	ATAAAAATAAAAAAAAAA	<2.8>	.	.	Motif=ATAAAA	GT:AD:DP:PL	0/0:23,2:25:0,33,255	0/1:13,21:34:255,0,165	0/1:13,18:31:255,0,173
+chr21	17934431	chr21:17934431:M	CTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:21,13:34:255,0,255	0/1:21,26:48:255,0,255
+chr21	17936465	chr21:17936465:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:37:0,90,255	0/1:16,15:35:160,0,217	0/1:18,20:41:240,0,233
+chr21	17938384	chr21:17938384:M	ATATATATAGATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:19,13:32:141,0,249	0/0:32,0:32:0,95,255
+chr21	17941287	chr21:17941287:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,7:14:93,0,49	0/1:4,4:9:43,0,43	1/1:0,7:10:131,24,0
+chr21	17945210	chr21:17945210:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,1,7:17:177,113,238,0,130,132	0/1:13,7,0:22:131,0,255,121,255,255	1/2:0,3,10:14:255,183,147,53,0,13
+chr21	17947533	chr21:17947533:M	ACACACACACAGACACACACACACACACACACACA	<16.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,26,0:42:255,0,182,255,255,255	0/2:16,1,16:33:191,255,255,0,224,203	1/1:0,34,0:35:255,103,0,255,105,255
+chr21	17948311	chr21:17948311:M	AAAAAAGAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:35:200,0,255	0/0:41,0:41:0,121,255	1/1:0,46:46:255,136,0
+chr21	17950493	chr21:17950493:M	ACACAACACACACACACACACACACACACACACACACACACAC	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:8,6:15:72,0,99	0/0:8,1:11:0,10,120	1/1:0,13:14:235,41,0
+chr21	17951108	chr21:17951108:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<14>,<15>,<19>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,23,16,0:40:255,255,255,253,255,183,255,255,0,255,255,255,255,255,255	3/4:0,1,1,17,9:29:255,255,255,255,255,255,255,255,255,255,255,255,255,0,255	1/2:0,29,13,0,0:43:255,238,110,255,0,255,255,201,255,255,255,239,255,255,255
+chr21	17952195	chr21:17952195:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,17	0/1:2,3:8:50,0,12	.
+chr21	17956280	chr21:17956280:M	CTCTCTCTCTC	<3.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:14,20:34:255,0,255	0/0:15,0:15:0,45,255	1/1:0,42:42:255,126,0
+chr21	17963064	chr21:17963064:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:13:157,31,0	0/0:0,0:1:0,0,0	1/1:0,10:10:144,29,0
+chr21	17963074	chr21:17963074:M	AATAATAATAATAATAATAATAA	<6.3>,<6.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/2:1,13,13:30:255,93,33,113,0,42	2/2:0,0,28:28:255,255,199,80,63,0	1/1:0,28,0:35:255,104,0,255,78,248
+chr21	17965912	chr21:17965912:M	TTTTTTTTTTTTTTTT	<17>,<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,15,8:26:255,255,255,165,162,93,255,255,0,208	1/3:0,9,0,7:16:255,213,186,255,119,255,153,0,250,238	2/2:0,2,19,2:27:255,255,255,55,10,0,255,255,38,255
+chr21	17966892	chr21:17966892:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,14:27:182,0,154	0/1:18,11:33:116,0,239	0/0:35,0:36:0,105,255
+chr21	17973395	chr21:17973395:M	TTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<7.4>,<7.6>,<8>	.	.	Motif=TTTTC	GT:AD:DP:PL	3/3:0,0,0,4:4:73,83,113,83,112,111,12,12,12,0	0/1:3,4,2,1:10:88,0,70,41,29,77,88,41,69,146	0/2:4,1,10,0:15:149,135,231,0,53,29,186,232,62,255
+chr21	17976271	chr21:17976271:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:5:115,15,0	.
+chr21	17977365	chr21:17977365:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:10:17,0,101	0/0:14,0:18:0,52,255	1/1:1,9:10:144,11,0
+chr21	17978717	chr21:17978717:M	AAAAAAGAAAAAAAAAGAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:19:93,0,69	0/1:9,10:20:91,0,76	1/1:1,13:15:178,25,0
+chr21	17988403	chr21:17988403:M	TTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:16,13:31:154,0,229	0/1:15,6:25:36,0,228	1/1:1,18:19:255,38,0
+chr21	17991659	chr21:17991659:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,13,0:20:255,0,95,236,95,255	1/2:0,10,8:21:255,114,76,194,0,142	0/0:10,0,2:13:0,30,255,0,174,141
+chr21	17992719	chr21:17992719:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,4:6:120,0,8	1/1:0,4:6:151,18,0	0/0:0,0:2:0,2,3
+chr21	18001774	chr21:18001774:M	TTTTTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3:7:32,52,174,0,61,43	0/1:2,7,2:14:216,0,44,194,0,216	0/2:4,0,1:6:3,17,135,0,67,53
+chr21	18003122	chr21:18003122:M	AAAAAAAAAAAAAACAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:14:165,0,126	0/1:6,8:17:170,0,143	0/0:16,0:18:0,53,255
+chr21	18003387	chr21:18003387:M	TTATTTTATTTTATT	<2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:15,28:43:255,0,163	0/1:13,9:22:99,0,172	0/0:27,0:27:0,80,255
+chr21	18008313	chr21:18008313:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,20:36:255,0,197	1/1:0,46:47:255,138,0	0/0:39,1:41:0,102,255
+chr21	18028209	chr21:18028209:M	CCTCCCCTCCCCTCCCCTCCCCTCCCCTTCCCCTTCCCCT	<7>,<8.2>	.	.	Motif=CCTCC	GT:AD:DP:PL	1/2:0,4,3:8:51,13,30,49,0,53	1/2:0,6,2:9:67,7,8,72,0,86	0/0:8,2,1:11:0,5,94,14,34,40
+chr21	18028246	chr21:18028246:M	CCTTTTCCTTTTCTTTTTCTTTTTCCTTTTCC	<2.3>,<6>	.	.	Motif=CCTTTT	GT:AD:DP:PL	1/2:0,1,6:18:179,148,171,52,0,48	1/2:0,3,4:8:160,96,102,73,0,62	0/2:6,0,4:11:69,95,255,0,136,115
+chr21	18028278	chr21:18028278:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<12.2>,<13.2>	.	.	Motif=CCTT	GT:AD:DP:PL	1/2:0,5,6:11:242,73,43,63,0,31	1/1:0,1,0:3:29,3,0,15,3,12	0/2:0,0,11:14:193,128,147,0,42,10
+chr21	18050927	chr21:18050927:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:43:0,126,255	0/0:31,3:37:0,55,255	0/1:24,18:44:214,0,255
+chr21	18056477	chr21:18056477:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/0:23,0:23:0,67,255	0/1:15,13:28:151,0,187
+chr21	18059494	chr21:18059494:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:39:255,96,0	1/1:1,34:37:255,91,0	0/1:17,11:29:113,0,231
+chr21	18084921	chr21:18084921:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/0:15,0:17:0,49,255	0/1:10,11:23:133,0,116
+chr21	18090727	chr21:18090727:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:9:0,5,103	0/1:3,5:10:61,0,37	0/1:9,11:23:162,0,95
+chr21	18108148	chr21:18108148:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:25:0,42,255	0/0:22,0:29:0,80,255	0/1:18,27:46:255,0,255
+chr21	18108838	chr21:18108838:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,14:25:255,250,180,178,0,110	1/2:0,15,10:25:255,171,98,255,0,184	0/1:16,16,0:33:255,0,255,255,255,255
+chr21	18117692	chr21:18117692:M	AATAAATAAATAAGATAAAATAAATAAATAAATAAGAAGAAATAAATAAATAAA	<12.5>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:7,10:20:81,0,41	0/1:3,5:11:40,0,15	0/0:16,0:18:0,44,201
+chr21	18122549	chr21:18122549:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:2,42:44:255,94,0	0/1:23,15:38:166,0,255
+chr21	18126596	chr21:18126596:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,21:40:255,0,226	0/1:23,14:38:145,0,255	0/1:17,23:40:255,0,190
+chr21	18129270	chr21:18129270:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:45:255,132,0	1/1:0,39:40:255,117,0	0/1:28,20:49:245,0,255
+chr21	18129873	chr21:18129873:M	TCTCTCTCTCTGTCTTTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:11,14:34:255,0,255	0/1:18,14:37:255,0,255	0/1:9,13:27:255,0,192
+chr21	18129893	chr21:18129893:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGT	<19.5>,<20.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,17,12,0:30:255,210,122,255,0,221,255,210,255,255	1/2:0,17,9,0:27:255,151,74,255,0,208,255,151,255,255	1/3:1,9,0,9:20:255,136,232,255,255,255,245,0,163,233
+chr21	18136106	chr21:18136106:M	AAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:87,9,0	1/1:0,2:4:71,9,0	0/1:0,2:5:59,0,1
+chr21	18136720	chr21:18136720:M	ATATATATATATATATATATATATATATATATATGTATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,17:18:255,36,0	1/1:0,0:2:16,4,0	1/1:0,5:6:68,4,0
+chr21	18145436	chr21:18145436:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:84,14,5,48,0,38	0/2:1,0,3:4:36,39,61,0,15,4	.
+chr21	18148885	chr21:18148885:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:33:255,94,0	1/1:3,45:49:255,91,0	1/1:0,30:35:255,98,0
+chr21	18151083	chr21:18151083:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,12:12:255,36,0	1/1:0,17:19:255,56,0
+chr21	18151989	chr21:18151989:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:19:255,57,0	1/1:0,22:25:255,69,0	1/1:0,17:18:255,54,0
+chr21	18158072	chr21:18158072:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,21:32:255,0,59	1/1:2,19:23:255,33,0	1/1:3,34:38:255,59,0
+chr21	18158839	chr21:18158839:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:10:143,28,0	1/1:1,6:8:85,8,0	1/1:1,5:8:72,5,0
+chr21	18158854	chr21:18158854:M	AAGAAGAAGAAAAGAA	<3.7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,1:1:20,3,0	1/1:0,1:1:20,3,0	1/1:0,3:3:61,9,0
+chr21	18162412	chr21:18162412:M	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCT	<22.5>,<25.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,19:19:255,255,255,57,57,0	1/2:1,8,11:20:255,255,255,113,0,185	1/2:0,10,2:13:183,49,29,162,0,250
+chr21	18167202	chr21:18167202:M	TCTCTCTCTCT	<3.5>,<7.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,16:17:255,255,255,48,51,0	2/2:0,0,17:20:255,255,255,51,60,0	1/1:0,3,0:4:76,9,0,84,12,105
+chr21	18167212	chr21:18167212:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,13:24:255,0,73	0/1:8,12:21:255,0,167	0/0:9,0:13:0,39,255
+chr21	18171115	chr21:18171115:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,24,18:44:255,255,215,255,0,255	1/2:2,15,14:32:255,220,169,192,0,197	1/1:1,51,1:53:255,138,0,255,137,255
+chr21	18171163	chr21:18171163:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:21:255,62,0	1/1:0,12:12:223,35,0	1/1:0,26:26:255,77,0
+chr21	18171737	chr21:18171737:M	TTTTTTTTTTTTTCTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,17:34:255,255,233,255,0,194	1/2:0,21,16:38:255,241,175,255,0,255	2/2:1,1,35:37:255,255,255,90,90,0
+chr21	18174099	chr21:18174099:M	ATATATATATATATATATCTTGGTGTATATATATATATATATATATATATATATATATATATA	<21.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,5:5:138,15,0	1/1:0,5:5:137,15,0	0/0:0,0:1:0,0,0
+chr21	18189630	chr21:18189630:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:53,9,0	0/1:3,3:6:33,0,33	0/1:1,2:5:43,0,3
+chr21	18194604	chr21:18194604:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:145,0,182	0/1:16,11:28:111,0,210	0/1:19,18:39:231,0,229
+chr21	18195029	chr21:18195029:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<9.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:5,6:11:78,0,58	0/1:11,12:23:161,0,139
+chr21	18201801	chr21:18201801:M	TTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:8:0,24,202	0/0:8,0:8:0,24,220	0/1:5,3:10:59,0,116
+chr21	18205738	chr21:18205738:M	TTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:22:255,65,0,255,66,255	0/1:11,12,1:25:138,0,132,180,165,255	1/2:1,9,6:20:255,137,136,152,0,239
+chr21	18206864	chr21:18206864:M	ATTATTATTATTATTATTATTATTATTATTATTTTATTAT	<11.3>,<12.3>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,29,0:29:255,87,0,255,86,255	0/1:3,11,0:14:255,0,45,196,53,213	1/2:0,12,5:17:255,80,44,223,0,177
+chr21	18207660	chr21:18207660:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:103,18,0	1/1:0,6:7:109,20,0	1/1:0,1:4:17,3,0
+chr21	18208172	chr21:18208172:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:38:0,97,255	0/1:21,0:29:22,0,255	0/1:13,11:30:243,0,255
+chr21	18211142	chr21:18211142:M	ACACACACACACACACACACACACACACTCACACTCACAC	<18>,<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,18,1:20:255,255,255,57,60,0,255,255,40,255	2/3:0,0,13,8:22:255,255,255,137,140,76,226,238,0,176	1/2:0,14,8,0:22:255,218,180,255,0,255,255,143,255,255
+chr21	18215200	chr21:18215200:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:41:0,120,255	0/0:38,1:39:0,97,255	0/1:25,17:43:176,0,255
+chr21	18219779	chr21:18219779:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:57,0:58:0,171,255	0/0:44,0:44:0,129,255	0/1:25,23:51:255,0,255
+chr21	18232943	chr21:18232943:M	ATATATATATATATATATATATATATATATGTATATATAT	<21>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,5:15:44,0,125	0/0:3,0:4:0,12,62	1/1:0,2:3:34,6,0
+chr21	18241250	chr21:18241250:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0,0:25:0,73,255,75,255,255	0/2:13,1,13:31:255,255,255,0,213,255	0/1:22,21,0:44:255,0,255,255,255,255
+chr21	18243548	chr21:18243548:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:39:0,105,255	0/1:19,14:33:148,0,235	0/0:20,1:23:0,46,255
+chr21	18251520	chr21:18251520:M	TATTTATTTTATTTATTATTT	<3.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,3:3:83,9,0	.	1/1:0,1:1:27,3,0
+chr21	18254135	chr21:18254135:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,0:46:0,135,255	0/1:23,26:51:255,0,255	0/0:52,1:53:0,138,255
+chr21	18254719	chr21:18254719:M	TCTATCTATCTATCTA	<3>	.	.	Motif=TCTA	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/1:19,29:48:255,0,204	0/0:42,0:42:0,124,255
+chr21	18260821	chr21:18260821:M	AACAACAACAACAACAACAACAACAACAAAAAAACACCACCAACAACAACAA	<15.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:11,7:18:134,0,244	0/0:22,0:22:0,66,255
+chr21	18261361	chr21:18261361:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1:21:0,41,255	0/0:17,2:21:0,26,255	0/1:17,10:29:114,0,219
+chr21	18263902	chr21:18263902:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2,0:40:0,81,255,114,255,255	0/1:23,13,0:38:111,0,255,186,255,255	0/2:14,2,11:32:232,166,255,0,244,255
+chr21	18264602	chr21:18264602:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:2,4,123,0,46,40	1/2:0,3,2:6:111,27,41,89,0,84	0/2:4,0,3:7:21,42,185,0,55,35
+chr21	18264624	chr21:18264624:M	AGAGAGAGAGA	<7.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:16,8:27:97,0,255	0/1:12,5:17:62,0,222
+chr21	18265311	chr21:18265311:M	ATATATATATAT	<5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:34:0,78,255	0/0:24,0:41:0,102,255	0/1:31,19:63:66,0,255
+chr21	18268938	chr21:18268938:M	CTCTCTCTCTCT	<4>	.	.	Motif=CT	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/1:23,24:47:255,0,255	0/1:19,32:51:255,0,255
+chr21	18271586	chr21:18271586:M	TTTTCTTTTCTTTTCTTTTTTTT	<5.6>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:17,18:35:243,0,224	0/1:21,21:42:255,0,255	0/0:47,0:47:0,139,255
+chr21	18276756	chr21:18276756:M	TTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0,0:6:0,18,170,18,170,170	0/2:4,0,7:14:217,200,255,0,105,81	1/1:0,11,0:13:255,39,0,255,39,255
+chr21	18280594	chr21:18280594:M	AACAACAAAACAACAA	<4.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:24,0:27:0,51,255	0/1:7,7:15:71,0,62	0/0:18,0:19:0,49,255
+chr21	18281026	chr21:18281026:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,3:50:0,91,255	0/1:27,23:52:255,0,255	0/0:44,0:44:0,130,255
+chr21	18285001	chr21:18285001:M	AAAAAAAAAAAAGAGAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:24:255,70,0	1/1:0,29:30:255,88,0	1/1:0,21:22:255,64,0
+chr21	18288529	chr21:18288529:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,3:5:95,52,75,53,0,45	1/1:0,3,0:5:109,15,0,111,15,114	2/2:0,0,2:2:34,40,58,6,6,0
+chr21	18300357	chr21:18300357:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:1,23:24:255,53,0	1/1:1,32:34:255,82,0
+chr21	18308377	chr21:18308377:M	ACACACACACACACACACACACACACACA	<17.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:14,1,8:23:171,184,255,0,255,255	0/0:20,0,0:20:0,60,255,60,255,255	1/2:0,15,10:25:255,255,214,255,0,255
+chr21	18308599	chr21:18308599:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,15:34:255,239,182,255,0,250	2/2:2,2,25:29:255,255,255,49,49,0	1/1:0,36,1:40:255,116,0,255,99,255
+chr21	18310934	chr21:18310934:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14,0:15:255,16,0,255,41,252	1/1:0,23,1:29:255,83,0,255,65,255	0/2:2,0,15:19:255,255,255,0,63,16
+chr21	18313336	chr21:18313336:M	TCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:20,15:39:207,0,255	1/1:0,27:31:255,80,0	0/1:27,19:49:255,0,255
+chr21	18313350	chr21:18313350:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,16:40:255,0,255	1/1:0,24:24:255,72,0	0/0:24,0:24:0,72,255
+chr21	18313894	chr21:18313894:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,0,14:27:190,244,255,0,186,114	0/0:23,0,1:25:0,74,255,56,255,255	1/2:0,12,17:34:255,255,255,255,0,255
+chr21	18315495	chr21:18315495:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,6:18:43,0,139	0/0:6,0:6:0,17,92	0/1:14,5:19:23,0,164
+chr21	18316025	chr21:18316025:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,26:26:255,76,0	1/1:0,16:16:255,47,0	1/1:0,30:33:255,96,0
+chr21	18319423	chr21:18319423:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:81,0,54	0/0:5,0:7:0,9,83	0/1:3,2:5:20,0,37
+chr21	18321350	chr21:18321350:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:52,2,0	0/1:2,2:7:41,0,15	0/1:1,3:5:50,0,3
+chr21	18331073	chr21:18331073:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,6:7:155,0,7	0/0:4,0:5:0,13,115	1/1:0,2:3:55,6,0
+chr21	18335940	chr21:18335940:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:27:255,70,0	1/1:1,31:32:255,76,0	1/1:1,30:32:255,76,0
+chr21	18338695	chr21:18338695:M	AGAGAGAGAGACAGAGACAGACAGAGAGAGAGATAAAGAGAGAGAAAGAGAGAGAGAG	<31>	.	.	Motif=AG	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/1:3,7:10:161,0,51	0/0:16,0:16:0,48,255
+chr21	18365744	chr21:18365744:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,69,255	0/1:9,3:14:11,0,116	0/1:3,3:7:44,0,29
+chr21	18369975	chr21:18369975:M	AAAAAAAAAAAAAAGAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,5:11:161,64,61,35,0,53	1/2:1,4,6:12:208,94,80,41,0,44	2/2:0,0,8:9:236,174,152,27,26,0
+chr21	18372099	chr21:18372099:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,6,0:17:55,0,142,104,190,255	1/2:1,7,10:20:255,242,224,103,0,154	0/1:4,7,0:11:87,0,36,118,68,255
+chr21	18376201	chr21:18376201:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:2,26:29:255,50,0	1/1:2,35:43:255,87,0
+chr21	18380168	chr21:18380168:M	CACACACACACACACACACACACACACACACACACACAC	<20.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,10,0:21:114,0,119,147,173,255	1/1:2,15,0:17:218,16,0,224,49,255	0/2:8,2,13:24:255,190,255,0,114,172
+chr21	18387597	chr21:18387597:M	ACACACACACACACATACACACACACACACACACACACACACACACACACACACGCACACACAC	<27>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,45,0	1/1:0,10:13:255,15,0	0/1:6,6:12:128,0,139
+chr21	18396809	chr21:18396809:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<12.8>,<14.8>,<33.8>	.	.	Motif=TCTA	GT:AD:DP:PL	1/2:0,9,4,5:18:255,98,67,210,0,198,255,47,168,255	2/3:0,0,3,7:12:150,145,142,71,71,60,79,74,0,60	1/2:1,7,4,0:12:238,72,71,138,0,153,249,97,173,255
+chr21	18402528	chr21:18402528:M	AAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,2:8:179,32,12,86,0,75	0/2:1,1,6:8:170,83,88,0,9,6	0/0:8,0,0:10:0,24,230,30,240,255
+chr21	18407426	chr21:18407426:M	TTTCTTTTTCTTTTTTTCTTTTCTTTTTTTTTTTTTTT	<5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:4,22:26:255,0,30	0/1:1,14:17:255,0,2	0/0:8,0:10:0,27,235
+chr21	18410117	chr21:18410117:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,18:30:246,0,118	0/0:19,0:21:0,61,255	0/1:11,8:19:89,0,143
+chr21	18410599	chr21:18410599:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:39:230,0,255	0/0:42,1:43:0,108,255	0/1:33,21:57:226,0,255
+chr21	18411340	chr21:18411340:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,21:36:255,0,154	0/1:19,20:39:237,0,219	0/0:38,0:38:0,112,255
+chr21	18413187	chr21:18413187:M	CCTTCCTGCCTTCCCTCCCTCCCTCCCTTCCTCTTCCTTCCTTCCTTTTCTCTCTCTTTCTTCCTTCCTT	<12>	.	.	Motif=CCTT	GT:AD:DP:PL	0/1:3,1:5:13,0,68	0/1:5,3:8:49,0,107	0/1:2,0:5:12,0,42
+chr21	18413585	chr21:18413585:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:21:236,0,204	0/1:11,6:19:118,0,240	0/0:12,0:13:0,36,255
+chr21	18419221	chr21:18419221:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:105,0,14	0/1:1,1:4:34,0,19	0/1:2,2:5:44,0,54
+chr21	18423410	chr21:18423410:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:12:65,0,65	0/0:14,1:15:0,26,223	0/1:2,7:10:104,0,7
+chr21	18440373	chr21:18440373:M	AAAAAAAAAAAAAAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:196,24,0	1/1:0,8:9:225,27,0	1/1:0,2:2:54,6,0
+chr21	18441282	chr21:18441282:M	AAACAAAACAAAACAAAACAAAACAAAACCAAAAAAACAAA	<11.2>	.	.	Motif=AAACA	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:10,7:17:141,0,221	0/0:30,0:30:0,90,255
+chr21	18441607	chr21:18441607:M	AAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,9:13:229,0,49	1/1:0,12:15:255,38,0	1/1:1,19:20:255,31,0
+chr21	18441662	chr21:18441662:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<11>,<12>,<13>,<16>	.	.	Motif=ATT	GT:AD:DP:PL	3/4:0,0,0,8,13:21:255,255,255,255,255,255,247,255,255,255,228,228,152,0,192	2/3:0,0,8,5,0:14:255,255,255,90,100,62,141,121,0,103,255,255,100,144,255	1/4:0,23,0,0,9:32:255,167,192,255,255,255,255,255,255,255,255,0,255,255,255
+chr21	18445207	chr21:18445207:M	TTTTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,17,10:31:255,147,220,255,0,255	0/2:7,0,12:21:172,208,255,0,117,62	1/2:0,15,10:28:255,182,206,255,0,255
+chr21	18447440	chr21:18447440:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:5:18,0,28	0/1:2,4:6:45,0,14	0/1:1,1:2:10,0,10
+chr21	18449859	chr21:18449859:M	ACACACACACACACACACGCACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,26:28:255,81,0	1/1:0,22:26:255,73,0	1/1:0,27:30:255,82,0
+chr21	18471477	chr21:18471477:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,26:45:255,0,225	0/1:14,23:38:255,0,148	0/1:27,23:50:255,0,255
+chr21	18472456	chr21:18472456:M	TATATATATATATATATATATATATA	<10>,<11>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,11,3,2:16:255,54,32,192,0,153,255,10,161,255	1/2:0,10,7,0:17:255,120,71,171,0,122,255,101,170,255	1/3:1,17,0,9:27:255,140,198,255,165,255,255,0,255,255
+chr21	18494091	chr21:18494091:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,18,1:29:255,0,100,255,165,255	1/2:2,12,9:23:255,124,92,143,0,165	0/1:16,9,0:25:90,0,215,138,255,255
+chr21	18494530	chr21:18494530:M	AAAAAACAAAACAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:18,12:30:125,0,229	0/0:38,0:38:0,112,255
+chr21	18496963	chr21:18496963:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,15:38:202,0,255	1/1:3,34:38:255,59,0	0/1:22,30:54:255,0,255
+chr21	18504705	chr21:18504705:M	TATATATATATATATATATATATATATATATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:5,0:6:0,17,153	.	1/1:0,4:4:135,12,0
+chr21	18506583	chr21:18506583:M	TTTTTTTTTTTCTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,19:32:255,0,255	1/1:0,32:32:255,96,0	0/1:24,20:45:255,0,255
+chr21	18506891	chr21:18506891:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:37:154,0,255	1/1:1,26:29:255,67,0	0/1:21,14:39:177,0,255
+chr21	18506936	chr21:18506936:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14,3:30:255,0,255,207,185,255	1/2:0,19,11:30:255,160,103,255,0,241	0/1:13,9,1:24:217,0,255,143,228,255
+chr21	18512845	chr21:18512845:M	CAAACAACAACAACAACAACAACAACAACAACAAAAAAAAAACAAAAACAAA	<6.2>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:10,16:26:255,0,175	1/1:0,36:36:255,108,0	0/1:6,14:20:255,0,91
+chr21	18513853	chr21:18513853:M	ATAAATAAATAAATAAATAAATAAATAA	<6>	.	.	Motif=ATAA	GT:AD:DP:PL	0/1:13,17:30:244,0,163	0/1:12,9:21:104,0,156	0/1:12,18:30:251,0,138
+chr21	18516435	chr21:18516435:M	ACACACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,19:39:247,0,255	0/1:20,21:42:255,0,236	0/1:24,18:43:210,0,255
+chr21	18519127	chr21:18519127:M	AAACAAACAAACAAACAAA	<3.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:8,15:23:225,0,87	0/1:18,11:29:116,0,242	0/1:23,11:34:109,0,255
+chr21	18519164	chr21:18519164:M	AACAACAACAACAACAACAACAA	<6.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:15,13:28:145,0,177	0/1:18,12:30:113,0,210	0/1:17,16:33:178,0,191
+chr21	18527500	chr21:18527500:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:24:132,0,151	1/1:1,18:20:255,41,0	0/1:12,12:25:149,0,143
+chr21	18528541	chr21:18528541:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:11,0,10:23:243,255,255,0,255,255	1/2:0,10,6:19:255,160,122,255,0,255	0/2:14,0,10:28:255,255,255,0,255,255
+chr21	18543627	chr21:18543627:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:32:255,94,0	1/1:3,30:33:255,44,0	1/1:4,41:45:255,60,0
+chr21	18548101	chr21:18548101:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:34:245,0,171	0/1:17,13:32:157,0,199	0/1:7,20:30:255,0,47
+chr21	18555872	chr21:18555872:M	ATATATATATATATA	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,22:40:255,0,194	1/1:0,30:31:255,88,0	0/1:23,26:50:255,0,255
+chr21	18570664	chr21:18570664:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:38:255,0,173	0/0:41,0:43:0,126,255	1/1:2,37:41:255,84,0
+chr21	18588171	chr21:18588171:M	AAAAAAAAAAAAAAAAAAAAGAAAGAAAGGAAAAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:43,0,33	0/1:3,1:5:4,0,40	0/1:1,3:7:54,0,8
+chr21	18597484	chr21:18597484:M	AAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,16:30:255,255,255,196,0,255	1/1:2,35,0:37:255,74,0,255,111,255	2/2:1,0,33:42:255,255,255,94,98,0
+chr21	18613195	chr21:18613195:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:11,0,13,0:25:158,181,255,0,181,122,226,255,161,255	2/3:2,2,11,5:20:202,174,255,54,109,94,170,154,0,255	0/1:5,12,1,0:20:255,0,88,209,69,242,255,87,255,255
+chr21	18625585	chr21:18625585:M	TTTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:22,0,13:35:255,211,255,0,255,255	0/0:41,0,0:42:0,126,255,123,255,255	1/2:0,12,12:26:255,193,119,214,0,142
+chr21	18630038	chr21:18630038:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,11:34:100,0,255	0/0:25,2:29:0,50,255	1/1:1,15:18:255,34,0
+chr21	18632516	chr21:18632516:M	GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,15:29:255,244,201,255,0,182	1/1:0,31,0:33:255,99,0,255,97,255	2/2:0,1,39:40:255,255,255,118,99,0
+chr21	18635482	chr21:18635482:M	ACACATACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<19.5>,<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/4:0,5,0,0,8:14:255,142,206,255,224,255,255,219,255,255,150,0,148,151,127	3/4:1,0,0,4,3:9:90,113,218,113,218,218,36,83,83,63,62,120,120,0,106	1/2:0,17,15,0,0:33:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
+chr21	18638775	chr21:18638775:M	CACACACACCATACACACACACACACAC	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,20:41:255,0,230	0/0:32,0:32:0,94,255	0/1:17,25:43:255,0,180
+chr21	18648171	chr21:18648171:M	CTATCTATCTAGCTATCATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATC	<19.2>,<20.2>	.	.	Motif=CTAT	GT:AD:DP:PL	0/2:2,0,1:3:18,18,48,0,37,49	0/1:9,3,0:12:19,0,127,46,159,255	1/2:0,6,3:9:171,55,29,94,0,85
+chr21	18648690	chr21:18648690:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,42:42:255,124,0	1/1:0,40:40:255,118,0
+chr21	18658665	chr21:18658665:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,2:35:0,66,255	0/1:14,14:30:162,0,164	0/0:17,2:22:0,28,255
+chr21	18661751	chr21:18661751:M	TTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:23,14:37:255,0,255	0/0:41,0:41:0,123,255	0/1:16,16:32:255,0,255
+chr21	18668457	chr21:18668457:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,21:28:255,0,111	0/0:37,0:40:0,114,255	0/1:21,15:38:255,0,255
+chr21	18669773	chr21:18669773:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTATT	<9.7>,<15.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,13,4:17:255,76,76,255,0,255	2/2:0,0,10:10:181,210,255,29,30,0	0/1:0,13,0:17:255,0,0,255,37,255
+chr21	18674538	chr21:18674538:M	ATATATATATGTGTATATATATACATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,6:16:85,0,195	0/0:11,0:11:0,33,255	0/0:15,2:17:0,5,255
+chr21	18682771	chr21:18682771:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:124,0,162	0/0:22,0:22:0,65,255	0/1:12,18:30:242,0,133
+chr21	18683495	chr21:18683495:M	TGTGTGTATGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,18:31:253,0,137	0/0:31,0:34:0,99,255	0/1:12,20:32:255,0,129
+chr21	18684544	chr21:18684544:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:14:37,0,45	0/0:7,0:10:0,10,69	0/0:9,0:9:0,25,105
+chr21	18692109	chr21:18692109:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:88,10,0	.	1/1:0,1:3:43,6,0
+chr21	18695530	chr21:18695530:M	CACACACACACACACACACACACACACACACA	<21>,<23>,<24>,<25>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,7,8,0:15:255,255,255,138,138,95,122,121,0,78,255,255,116,121,255	1/2:0,12,3,0,0:17:255,86,42,255,0,255,255,55,255,255,255,84,255,255,255	3/4:0,0,0,7,3:10:255,255,255,203,203,180,52,52,51,22,119,119,99,0,90
+chr21	18697021	chr21:18697021:M	TATATACATATATATAT	<10.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,43,0:43:255,129,0,255,129,255	1/2:0,19,7:27:255,197,140,255,0,255	1/1:0,36,0:36:255,108,0,255,108,255
+chr21	18705814	chr21:18705814:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:1,46:47:255,120,0	1/1:1,63:64:255,170,0
+chr21	18706968	chr21:18706968:M	TCCCTCTCCCTCTCCTTCTCC	<1.5>	.	.	Motif=TCCCTC	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:8,7:15:136,0,159	0/0:12,0:12:0,36,255
+chr21	18706982	chr21:18706982:M	CTTCTCCTTTTTCTTCTTCT	<2.3>,<7.3>	.	.	Motif=CTT	GT:AD:DP:PL	2/2:1,0,15:19:111,166,255,17,54,0	1/2:4,9,7:24:255,28,195,232,0,242	2/2:1,0,11:17:75,107,255,8,30,0
+chr21	18716677	chr21:18716677:M	GAAGGAAGGAAGGAAGGAAG	<6.2>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,32:36:255,87,0	1/1:0,32:34:255,92,0	1/1:0,47:48:255,139,0
+chr21	18727579	chr21:18727579:M	AAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,19,0:46:229,0,255,255,255,255	1/2:1,11,13:26:255,255,255,183,0,255	0/0:47,0,0:49:0,144,255,147,255,255
+chr21	18736210	chr21:18736210:M	AAAAAAAACAAAAAACAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,59,0	0/1:18,14:33:155,0,237	1/1:0,25:25:255,74,0
+chr21	18741702	chr21:18741702:M	ACACACACACACACACACACACACACACGCACACACACACAC	<23>,<29>,<30>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,11,6:17:255,255,255,108,108,58,197,197,0,148	1/3:1,8,0,6:15:255,140,142,255,101,255,191,0,225,207	2/2:0,0,4,0:4:125,125,125,12,12,0,82,82,12,70
+chr21	18758953	chr21:18758953:M	TTTTTTTTTTTTCTTTACTTTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:190,23,0	0/1:2,4:7:95,0,31	1/1:1,11:12:255,11,0
+chr21	18766361	chr21:18766361:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:43:255,125,0	0/1:17,13:33:255,0,255	1/1:0,62:67:255,192,0
+chr21	18784936	chr21:18784936:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,27:52:255,0,255	1/1:0,59:59:255,174,0	0/1:24,28:52:255,0,255
+chr21	18790419	chr21:18790419:M	ACACACACACACACACACACACACACACACACA	<11.5>,<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,14,0:33:255,0,255,255,255,255	0/1:7,21,0:29:255,0,133,255,195,255	0/2:11,0,14:26:255,255,255,0,255,247
+chr21	18791797	chr21:18791797:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:20:30,0,210	0/1:9,8:18:84,0,110	0/1:11,11:22:128,0,128
+chr21	18796472	chr21:18796472:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:13:78,0,69	1/1:2,8:13:122,1,0	0/1:4,4:9:53,0,44
+chr21	18796761	chr21:18796761:M	CACACACACACACACACACACACATACACACACACACACACAGACACA	<25>	.	.	Motif=CA	GT:AD:DP:PL	1/1:3,28:32:255,39,0	0/1:5,2:8:12,0,73	1/1:1,19:20:255,41,0
+chr21	18800869	chr21:18800869:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,6:10:89,114,210,0,45,24	1/2:1,3,1:5:39,2,17,36,0,73	0/0:2,0,0:2:0,6,35,6,35,35
+chr21	18802832	chr21:18802832:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,21:35:255,0,140	1/1:1,35:38:255,80,0	0/1:24,23:47:255,0,255
+chr21	18807399	chr21:18807399:M	CACACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,8:21:95,0,177	0/1:9,11:20:142,0,103	0/1:16,13:29:161,0,212
+chr21	18816512	chr21:18816512:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,15:25:210,0,92	1/1:2,27:31:255,56,0	0/1:13,19:37:255,0,138
+chr21	18820528	chr21:18820528:M	TTTTCTTTTTTTTTCTTTTTTTTTTTTT	<30>,<31>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10,0:27:198,0,255,177,255,255	1/2:0,8,4:14:255,63,28,136,0,121	0/1:6,11,1:18:255,0,116,173,136,255
+chr21	18827960	chr21:18827960:M	TTTTATTTTATTTTATTTATATTTTATTTTATTTATATTTT	<7.8>,<9.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/2:0,12,9:21:255,255,235,255,0,255	1/2:0,10,6:16:255,170,136,255,0,255	2/2:0,0,8:10:255,255,255,29,29,0
+chr21	18829614	chr21:18829614:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,2:17:7,0,255	0/0:12,0:12:0,36,255	1/1:0,3:3:77,9,0
+chr21	18829624	chr21:18829624:M	ATATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,22:35:255,0,255	0/1:2,10:16:255,0,26	1/1:0,30:36:255,108,0
+chr21	18831803	chr21:18831803:M	TTTATTTATTTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,16:29:224,0,166	0/1:14,23:37:255,0,146	0/1:20,18:38:227,0,255
+chr21	18846158	chr21:18846158:M	AATTAATTAATTAATTAATT	<6>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:12,12:25:160,0,163	0/1:10,8:20:113,0,123	1/1:0,32:33:255,97,0
+chr21	18848036	chr21:18848036:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,15:43:255,0,255	0/1:15,13:28:255,0,255	1/1:0,27:32:255,93,0
+chr21	18856187	chr21:18856187:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,6:18:122,0,250	0/1:19,14:33:255,0,255	1/1:0,27:28:255,81,0
+chr21	18859202	chr21:18859202:M	TATATATATATATATATATATATATGTATATATATATATATATATATATATATATATGTATATATATATATATATATATATATATATA	<9>,<16>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9,0:10:255,27,0,255,27,255	1/1:0,11,0:11:255,33,0,255,33,255	1/2:0,12,5:18:255,141,105,255,0,255
+chr21	18870047	chr21:18870047:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,23:40:255,0,199	0/1:11,11:22:129,0,129	0/1:21,30:52:255,0,228
+chr21	18884525	chr21:18884525:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,7,0:13:174,0,107,185,131,255	0/1:19,7,0:26:126,0,255,176,255,255	1/2:0,11,8:21:255,210,171,255,0,237
+chr21	18885273	chr21:18885273:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,1,10:24:230,161,255,0,255,255	0/1:9,18,0:30:255,0,210,255,240,255	0/2:13,0,11:28:238,184,255,0,255,255
+chr21	18891946	chr21:18891946:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:11:84,0,89	0/1:2,2:6:53,0,41	0/0:1,0:3:0,3,29
+chr21	18892031	chr21:18892031:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,4:13:137,0,214	0/1:6,1:11:15,0,212	0/1:3,0:6:11,0,84
+chr21	18901690	chr21:18901690:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:31:255,54,0	1/1:1,19:22:255,46,0	0/1:13,7:20:70,0,181
+chr21	18908717	chr21:18908717:M	GTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<7>	.	.	Motif=GTTTT	GT:AD:DP:PL	0/1:9,14:23:203,0,106	0/1:18,8:26:68,0,251	1/1:0,30:30:255,89,0
+chr21	18912184	chr21:18912184:M	TTTTTGTTTGTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,36:39:255,96,0	1/1:0,37:37:255,109,0
+chr21	18915208	chr21:18915208:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:38:255,94,0	1/1:3,38:42:255,70,0	1/1:0,53:55:255,161,0
+chr21	18920922	chr21:18920922:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,49:49:255,144,0	1/1:0,49:49:255,145,0
+chr21	18923133	chr21:18923133:M	AGATATAGATATAGATATAGATATAGATATAGATATA	<7.2>,<8.2>	.	.	Motif=AGATAT	GT:AD:DP:PL	0/1:16,23,0:39:255,0,197,255,255,255	0/2:6,0,16:22:255,255,255,0,107,109	1/2:0,18,8:26:255,149,75,255,0,255
+chr21	18926815	chr21:18926815:M	CCTCCCTCCCTCCCTCTCTTTTTTCCTTCCTTCCTCCCTCCCTCCCTCCTTCCTTTCCTTTCTCCCTCCCTCCCTCCC	<18.5>	.	.	Motif=CCTC	GT:AD:DP:PL	0/0:4,0:16:0,4,31	0/1:3,3:15:15,0,15	1/1:1,8:21:74,13,0
+chr21	18927353	chr21:18927353:M	GTGTGTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,37:37:255,109,0	1/1:0,33:34:255,100,0
+chr21	18942345	chr21:18942345:M	TCTCCCTCTCTCTCTCTCTCTCTCTCAATCTCTCTCTCT	<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,17:17:255,51,0	1/1:0,18:18:255,54,0	1/1:0,29:30:255,90,0
+chr21	18944354	chr21:18944354:M	CACACACACACACACACACACACACACGCACACACACAC	<18.5>,<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,20,0:34:255,0,160,255,220,255	1/2:1,18,9:31:255,148,182,255,0,255	0/2:20,2,12:34:118,179,255,0,255,255
+chr21	18945814	chr21:18945814:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,11,8:21:255,255,255,236,236,202,255,255,0,255	1/2:0,17,18,0:40:255,255,255,255,0,255,255,255,255,255	1/3:0,19,0,7:27:255,203,147,255,204,255,255,0,255,255
+chr21	18946786	chr21:18946786:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:30,16:46:156,0,255	0/1:20,16:37:193,0,255
+chr21	18957953	chr21:18957953:M	AAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:29:0,54,255	0/1:21,9:33:160,0,255	0/1:11,8:25:155,0,251
+chr21	18964657	chr21:18964657:M	CACACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/1:10,4:18:18,0,153	0/1:14,13:27:147,0,164
+chr21	18970348	chr21:18970348:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:85,9,0	0/0:6,1:9:0,1,164	0/0:11,0:12:0,36,255
+chr21	18981079	chr21:18981079:M	AAAAAAAAAAACAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,103,255	0/1:15,9:24:86,0,191	0/1:17,17:34:205,0,206
+chr21	18989204	chr21:18989204:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,55:57:255,130,0	0/1:23,14:37:143,0,255	1/1:0,51:51:255,151,0
+chr21	18989649	chr21:18989649:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,14:39:150,0,255	0/1:19,18:37:213,0,231	0/1:26,20:46:235,0,255
+chr21	18992545	chr21:18992545:M	TTTTTTTTTTTATTATTTTTT	<20>,<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,10,10,0:25:231,142,204,141,0,200,255,143,240,255	2/3:0,0,13,6:21:255,255,255,84,87,31,148,183,0,130	1/2:1,10,10,0:26:213,128,201,128,0,201,245,144,245,255
+chr21	19009436	chr21:19009436:M	AAAAAAAAAAATAAAAAATAAATAAAAAATAAAATAAAAAAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:21:200,0,47	0/0:6,1:7:0,4,86	0/1:7,10:17:126,0,73
+chr21	19022611	chr21:19022611:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,16,11:29:255,191,255,255,0,255	1/2:0,24,18:42:255,255,255,255,0,255	1/2:0,21,15:36:255,255,255,255,0,255
+chr21	19023140	chr21:19023140:M	AAAATAAAATAAAATAAAATAAAAAAATAAAATAAAATAATAAAATAAAATAAAATAAAACAAAACAAAATAAAA	<60>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,10:12:255,0,27	0/1:1,3:4:86,0,20	0/1:5,7:12:191,0,121
+chr21	19025137	chr21:19025137:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:26:143,0,171	0/1:15,19:35:231,0,162	0/1:19,20:40:242,0,233
+chr21	19036579	chr21:19036579:M	TTTCTTTCTTTCTTTCTTTCTTT	<3>,<3.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,4,3:7:188,22,1,26,0,5	1/1:0,0,0:1:13,3,0,6,1,4	0/0:13,1,0:17:0,10,255,17,255,255
+chr21	19036599	chr21:19036599:M	TTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,64,255	1/2:0,9,5:15:255,78,36,140,0,99	0/1:17,5,0:25:76,0,255,78,255,255
+chr21	19043910	chr21:19043910:M	ACACATACACACACACACACACACACACACACACACACACACACA	<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,12,0:13:193,21,0,196,38,222	1/2:0,7,4:12:210,76,44,97,0,82	0/1:10,9,0:19:99,0,116,129,169,255
+chr21	19066979	chr21:19066979:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,17:34:237,0,184	0/1:9,4:14:31,0,127	0/0:29,1:30:0,70,255
+chr21	19069366	chr21:19069366:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,6:24:255,160,106,255,0,255	1/2:0,6,13:23:255,255,255,114,0,115	0/1:20,12,0:33:123,0,255,215,255,255
+chr21	19071741	chr21:19071741:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:16:255,44,0	1/1:0,18:20:255,58,0	1/1:0,31:31:255,91,0
+chr21	19078947	chr21:19078947:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,4:14:255,71,77,239,0,223	0/1:1,5,0:8:144,0,23,137,26,155	0/2:2,0,4:7:61,70,162,0,33,15
+chr21	19081923	chr21:19081923:M	TTTATTTTATTTTATTTTATTTT	<3.6>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,33:33:255,97,0	1/1:0,36:36:255,106,0
+chr21	19082010	chr21:19082010:M	ACCTCCACCTCC	<1.8>	.	.	Motif=ACCTCC	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:17,21:38:255,0,255	0/0:27,0:27:0,81,255
+chr21	19094380	chr21:19094380:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAA	<47>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:53,9,0	0/1:1,2:5:39,0,3	1/1:0,6:9:122,23,0
+chr21	19095797	chr21:19095797:M	AAGGAAGGAAGGAAGAAAAGAAGGAAGGAAGGAA	<9.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:19,19:38:232,0,231	1/1:0,25:26:255,73,0	0/1:12,13:27:166,0,147
+chr21	19099925	chr21:19099925:M	AAAAAAAAATAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,2:35:0,68,255	0/1:20,22:43:239,0,216	0/0:54,0:54:0,158,255
+chr21	19102891	chr21:19102891:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:25,11:37:95,0,255	0/0:47,2:49:0,108,255
+chr21	19109672	chr21:19109672:M	TATCTATCTCTACTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<13>,<14>,<14.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,8,6,0:14:255,114,75,153,0,114,255,99,152,255	0/2:11,0,9,0:20:202,161,255,0,255,255,170,255,198,255	1/3:0,13,0,8:21:255,149,177,255,152,255,255,0,239,255
+chr21	19111472	chr21:19111472:M	AAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,9:15:255,161,125,70,0,36	1/2:0,7,2:10:223,31,4,116,0,100	2/2:0,1,8:11:248,157,132,30,12,0
+chr21	19111549	chr21:19111549:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3:14:12,0,158	0/0:28,2:31:0,56,255	0/1:10,13:25:165,0,113
+chr21	19118331	chr21:19118331:M	ACTCACTCACT	<2.5>	.	.	Motif=ACTC	GT:AD:DP:PL	1/1:0,52:52:255,144,0	1/1:0,40:40:255,111,0	1/1:0,39:39:255,108,0
+chr21	19121532	chr21:19121532:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:9:177,0,2	1/1:0,10:15:255,35,0	1/1:0,9:10:255,30,0
+chr21	19127600	chr21:19127600:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:82,9,0	0/1:3,4:12:101,0,66	0/1:6,2:11:26,0,151
+chr21	19128588	chr21:19128588:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0,0:17:0,50,255,50,255,255	0/1:1,3,0:6:47,0,3,50,4,88	0/2:3,0,9:12:120,153,255,0,44,17
+chr21	19135957	chr21:19135957:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:6:119,85,93,12,17,0	0/0:1,0,0:2:0,6,45,3,34,30	1/2:0,3,5:8:219,83,61,51,0,27
+chr21	19153216	chr21:19153216:M	ATATATATATATATA	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,29:32:255,87,0	1/1:0,27:29:255,81,0	1/1:0,41:41:255,123,0
+chr21	19153952	chr21:19153952:M	ATATATATATACATATATATATATATATATATATATAT	<24>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,3:12:255,39,12,255,0,247	1/2:0,0,2:3:37,26,23,12,0,6	1/1:0,3,0:4:107,12,0,107,12,107
+chr21	19154977	chr21:19154977:M	TTTTATTTTTTTTTTATTTTTTATTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:29:255,86,0	1/1:0,14:15:236,30,0	1/1:2,27:29:255,49,0
+chr21	19156588	chr21:19156588:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:120,15,0	0/1:4,2:8:65,0,104	1/1:0,2:4:76,10,0
+chr21	19157299	chr21:19157299:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,38:38:255,112,0	1/1:0,42:42:255,124,0
+chr21	19158838	chr21:19158838:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,38:39:255,96,0	0/1:14,16:30:201,0,164	1/1:1,38:39:255,96,0
+chr21	19161732	chr21:19161732:M	TTTTTTTTCTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:16:255,38,0	0/1:7,4:13:63,0,165	1/1:0,8:10:216,27,0
+chr21	19165953	chr21:19165953:M	TATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<9>,<13>,<14>	.	.	Motif=TATC	GT:AD:DP:PL	2/3:0,0,6,12:18:255,255,255,197,230,179,115,115,0,63	1/3:0,7,0,10:17:255,180,255,255,180,255,196,0,196,166	2/3:0,0,10,11:21:255,255,255,175,205,145,186,187,0,127
+chr21	19173721	chr21:19173721:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12,0:14:192,21,0,226,36,255	0/1:9,6,0:21:64,0,103,107,124,255	1/2:2,6,5:18:131,66,121,72,0,133
+chr21	19175582	chr21:19175582:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<10>,<10.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,10,0:13:211,32,0,64,14,33	1/1:0,2,0:3:39,6,0,12,2,6	1/2:0,12,9:24:255,62,1,71,0,10
+chr21	19175740	chr21:19175740:M	AAAAAAACAAAAACAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,15:15:255,44,0	0/1:11,8:19:94,0,151
+chr21	19183991	chr21:19183991:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,10:10:177,177,177,29,29,0	2/2:1,1,5:7:79,57,79,3,3,0	1/2:0,4,9:13:230,130,118,68,0,31
+chr21	19186895	chr21:19186895:M	ACACACACACACACACACACACACACACACACACACA	<17.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,7,11:18:255,255,255,194,195,144,105,124,0,72	1/2:0,16,15,0:33:255,249,255,255,0,255,255,250,255,255	0/3:11,0,2,14:27:255,255,255,210,255,255,0,196,160,249
+chr21	19189969	chr21:19189969:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:54,9,0	.	0/0:2,0:3:0,8,45
+chr21	19195354	chr21:19195354:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:3:78,9,0,49,8,41	0/1:7,2,0:9:23,0,150,25,91,93	2/2:1,3,11:18:136,79,135,1,7,0
+chr21	19195365	chr21:19195365:M	ATATATATATATATATATA	<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,13,7:24:255,114,46,240,0,181	0/1:7,1,0:13:1,0,197,21,203,221	0/2:13,0,6:25:111,75,255,0,255,255
+chr21	19200118	chr21:19200118:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25,0:25:255,74,0,255,74,255	1/1:0,6,0:6:106,18,0,106,18,106	1/2:0,9,7:16:255,126,80,137,0,116
+chr21	19200131	chr21:19200131:M	CACACACAAACACACACACACACACACACACACACACACACACACACA	<18>,<19>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,14,16:32:255,255,173,248,0,161	1/1:0,9,0:9:255,27,0,169,26,144	1/2:0,8,10:19:255,162,108,138,0,86
+chr21	19203510	chr21:19203510:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,74,0	0/1:20,25:46:255,0,221	0/1:26,20:48:237,0,255
+chr21	19204326	chr21:19204326:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,37:44:255,72,0	0/1:17,21:39:255,0,195	1/1:1,43:44:255,111,0
+chr21	19214306	chr21:19214306:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:74,9,0	1/1:0,2:3:49,6,0	1/1:0,6:7:162,21,0
+chr21	19216242	chr21:19216242:M	ACACACACACACACACACACAAACACACACACACACATACACACACACA	<27.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/0:19,0:20:0,60,255	0/1:10,11:23:249,0,211
+chr21	19223273	chr21:19223273:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,1:40:0,99,255	0/0:32,0:33:0,97,255	0/1:18,13:32:143,0,243
+chr21	19225155	chr21:19225155:M	TTTTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33,1:36:255,107,0,255,87,255	1/2:0,18,23:43:255,255,255,255,0,191	1/2:0,21,20:44:255,255,255,255,0,255
+chr21	19227216	chr21:19227216:M	AAAAAAAAAAACAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0,0:30:0,89,255,90,255,255	0/1:21,24,0:46:255,0,235,255,255,255	0/2:15,0,11:28:255,255,255,0,255,255
+chr21	19232571	chr21:19232571:M	TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCT	<22.5>,<23.5>,<24.5>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,1,11,9:21:255,255,255,123,106,61,161,105,0,100	2/3:0,4,11,10:25:255,255,255,135,78,61,190,64,0,120	1/2:0,16,9,0:27:255,123,45,228,0,153,255,97,224,255
+chr21	19232605	chr21:19232605:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTG	<14>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0:33:255,99,0,255,99,255	1/2:0,3,9:17:255,255,252,122,0,90	0/1:6,12,0:25:255,0,137,255,184,255
+chr21	19233751	chr21:19233751:M	TTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.2>,<9.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,12,9:21:255,163,103,217,0,158	1/1:0,22,0:23:255,69,0,255,68,255
+chr21	19242184	chr21:19242184:M	TTTTTTTTTTTTTCTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:31:0,62,255	0/1:18,17:37:255,0,255	0/0:26,0:28:0,83,255
+chr21	19248635	chr21:19248635:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:40:0,118,255	0/1:18,10:28:96,0,238	0/0:44,0:45:0,132,255
+chr21	19253451	chr21:19253451:M	TATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,52:53:255,159,0	1/1:0,16:19:255,48,0	1/1:0,16:16:255,48,0
+chr21	19254775	chr21:19254775:M	TATATATATATATATATATA	<8>,<9>,<12>	.	.	Motif=TA	GT:AD:DP:PL	3/3:0,0,0,27:27:255,255,255,255,255,255,81,81,81,0	2/3:0,0,16,5:21:255,255,255,138,141,94,255,255,0,255	1/3:0,14,0,12:28:255,255,255,255,255,255,255,0,255,255
+chr21	19260501	chr21:19260501:M	CACACACACACACACACACACACACACACACACACACACACACACACA	<13>,<25>	.	.	Motif=CA	GT:AD:DP:PL	0/2:10,0,3:13:14,52,255,0,172,135	0/2:8,0,8:17:86,132,255,0,132,86	0/1:5,18,0:23:255,0,77,255,84,255
+chr21	19261662	chr21:19261662:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:79,9,0	1/1:0,4:5:108,13,0	1/1:0,2:2:54,6,0
+chr21	19266518	chr21:19266518:M	ATATATATATATATATATGTATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:31,0:36:0,93,255	0/1:10,13:24:255,0,186	0/0:34,0:35:0,102,255
+chr21	19266542	chr21:19266542:M	ACACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:22,27:49:255,0,237	0/1:16,11:27:103,0,186	0/0:42,1:44:0,111,255
+chr21	19267499	chr21:19267499:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<7.5>,<12.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,29,0:29:255,255,255,86,87,0,255,255,87,255	1/2:0,16,16,0:33:255,255,255,255,0,255,255,255,255,255	2/3:1,0,7,19:27:255,255,255,255,255,255,112,200,0,137
+chr21	19271087	chr21:19271087:M	AAAATAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0,0:30:0,89,255,86,255,255	0/2:15,0,17:32:255,255,255,0,255,255	0/1:8,22,0:32:255,0,162,255,217,255
+chr21	19271733	chr21:19271733:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:0,17:18:255,52,0	1/1:0,12:12:220,35,0
+chr21	19274180	chr21:19274180:M	TTTTTCTTTCTTTCTTTTCTTTTTTTTTTTCTTTTCTTTCTTTTTTTTATTTTTTT	<59>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:13:0,39,255	0/1:4,7:12:193,0,83	0/1:9,7:17:177,0,213
+chr21	19276693	chr21:19276693:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:50,0:52:0,153,255	0/1:13,23:37:255,0,132	0/0:56,2:58:0,134,255
+chr21	19278413	chr21:19278413:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/1:23,11:35:102,0,255	0/1:12,19:32:255,0,126
+chr21	19283563	chr21:19283563:M	ACACACATACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:35,0:35:0,98,255	0/0:29,0:29:0,81,255	0/1:10,22:36:206,0,52
+chr21	19288908	chr21:19288908:M	ATACATACATACATACATACATACATACATACATACATACATACATAC	<11>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:11,11:23:140,0,130	0/0:16,0:17:0,50,255
+chr21	19292919	chr21:19292919:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:2,21:24:255,33,0	0/1:12,11:24:121,0,149	0/1:12,14:27:172,0,144
+chr21	19295856	chr21:19295856:M	ACAACAACAACAACAACAACAACAACAACGACAACAA	<13.3>	.	.	Motif=ACA	GT:AD:DP:PL	1/1:0,38:38:255,112,0	0/1:16,15:31:180,0,198	0/1:10,13:24:173,0,125
+chr21	19299309	chr21:19299309:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:32:0,93,255	0/0:26,1:28:0,64,255	0/1:34,13:47:91,0,255
+chr21	19309904	chr21:19309904:M	TTTTTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,4,5:11:143,51,55,24,0,60	0/1:3,2,0:5:19,0,35,28,49,101	0/2:7,0,2:10:26,33,127,0,117,169
+chr21	19324621	chr21:19324621:M	ACACAAACACACACACACACATACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,33:33:255,99,0	0/1:11,10:23:216,0,233
+chr21	19328514	chr21:19328514:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:0,0,62	0/0:0,0:1:0,3,11	0/1:2,3:5:36,0,19
+chr21	19329744	chr21:19329744:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,28:28:255,82,0	0/1:17,18:35:230,0,209
+chr21	19331481	chr21:19331481:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,3:8:115,35,31,43,0,58	0/1:4,5,0:9:59,0,42,71,68,173	0/2:4,0,4:9:84,68,123,0,75,95
+chr21	19341575	chr21:19341575:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:21,0,102	0/1:2,7:9:92,0,7	0/1:10,7:19:67,0,138
+chr21	19345531	chr21:19345531:M	TATATATATATATATATATATA	<8>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,35,0:36:255,105,0,255,105,255	1/2:0,9,5:15:255,88,110,244,0,229	1/2:0,21,10:32:255,191,217,255,0,255
+chr21	19349676	chr21:19349676:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,6:11:104,116,184,5,13,0	1/2:1,5,5:13:136,70,112,82,0,130	0/0:7,1,0:12:0,6,107,22,109,136
+chr21	19367520	chr21:19367520:M	ATATATATATATATATATATATA	<12.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:9,3,6:18:135,63,180,0,119,228	1/2:0,5,1:7:112,28,10,74,0,68	0/0:26,0,0:26:0,77,255,78,255,255
+chr21	19372104	chr21:19372104:M	AAAAAAAAAAAGAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17:38:206,0,255	0/0:31,2:33:0,62,255	0/1:15,18:33:232,0,176
+chr21	19372547	chr21:19372547:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:29:161,0,204	0/0:32,6:39:0,7,255	1/1:0,41:43:255,126,0
+chr21	19375706	chr21:19375706:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:55,0,3	0/1:2,1:5:24,0,19	.
+chr21	19400235	chr21:19400235:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:20:0,55,255	0/1:12,6:22:49,0,162	0/0:17,1:21:0,41,255
+chr21	19403322	chr21:19403322:M	ATCTATGTATCTATGTATCTATGTATCTATCTATGTATCTATCTATCTATCTATCTAT	<12.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:8,8:16:159,0,166	0/0:16,0:16:0,48,255	1/1:0,32:32:255,96,0
+chr21	19408203	chr21:19408203:M	ACACACACACACACACACACACACACACACACACA	<12.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,26,0:45:255,0,255,255,255,255	0/2:14,0,11:25:118,189,255,0,242,171	1/1:0,32,0:33:255,99,0,255,99,255
+chr21	19408262	chr21:19408262:M	TACATATACATATACATATACATATACATATA	<4.3>	.	.	Motif=TACATA	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:9,11:20:141,0,105	0/0:26,0:26:0,77,255
+chr21	19409697	chr21:19409697:M	ATATATATATATACATAAATTTATTTTATATATAATGGTATTATATTATATATAT	<28.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:7,5:12:55,0,89	0/0:13,0:14:0,41,248
+chr21	19439900	chr21:19439900:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,1:4:74,16,16,30,0,22	0/2:2,0,3:6:67,49,106,0,55,42	1/2:0,4,1:5:130,16,2,65,0,50
+chr21	19455460	chr21:19455460:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,2:19:0,19,255	0/1:11,11:24:139,0,122	0/0:24,3:28:0,28,255
+chr21	19459035	chr21:19459035:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:25:205,0,100	1/1:0,14:15:254,44,0	0/0:29,4:34:0,28,255
+chr21	19459199	chr21:19459199:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:20:0,54,255	0/1:10,8:21:155,0,213	0/0:17,0:18:0,54,255
+chr21	19460879	chr21:19460879:M	ATATATATATATATATATATATATA	<9.5>,<10.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:1,7,2,12:22:255,164,255,205,158,202,156,0,76,121	1/2:0,16,17,1:35:255,243,155,238,0,141,255,183,222,255	3/3:3,1,1,25:31:255,255,255,255,255,255,35,61,60,0
+chr21	19461588	chr21:19461588:M	CACACACACCACACACACATACACACACACACACACA	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,10:22:221,0,211	0/1:7,6:13:126,0,156	0/0:34,0:34:0,102,255
+chr21	19461624	chr21:19461624:M	AGAGAGAGAAAGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:7,12:19:239,0,117	0/1:7,12:20:234,0,115	0/0:38,0:38:0,114,255
+chr21	19463455	chr21:19463455:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,47:49:255,127,0	1/1:0,30:34:255,99,0	0/1:13,24:40:255,0,118
+chr21	19463993	chr21:19463993:M	ATATATATATATATATATATATATATATA	<15.5>,<20.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,6,8:16:255,210,205,72,0,144	0/2:0,0,1:3:21,27,45,0,21,22	1/1:1,15,0:16:203,31,0,249,48,255
+chr21	19466458	chr21:19466458:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,5:5:88,88,88,15,15,0	0/0:2,0,0:2:0,6,56,6,39,34	1/2:0,3,6:9:160,86,77,51,0,26
+chr21	19472165	chr21:19472165:M	CACACACACACA	<4>,<5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,8:19:255,126,93,201,0,148	1/1:0,12,0:12:255,36,0,243,35,211	2/2:0,0,24:24:255,255,255,71,71,0
+chr21	19472176	chr21:19472176:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<19.5>,<20.5>,<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:2,8,4,1,0:16:255,0,31,37,9,67,163,35,90,192,255,48,93,219,255	2/4:0,0,4,0,3:9:179,103,112,51,63,45,72,67,32,58,82,44,0,43,69	1/3:0,9,2,7,0:18:255,157,109,166,58,113,209,0,81,157,255,83,146,205,255
+chr21	19473227	chr21:19473227:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,13:28:255,255,255,241,0,255	1/2:0,15,10:25:255,255,212,255,0,255	1/1:0,45,0:45:255,133,0,255,135,255
+chr21	19486176	chr21:19486176:M	GTGTGTTTGTGTGTGTGTGTGTGTGTGTTGTGTATGTGT	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,24:43:255,0,235	0/0:20,0:20:0,59,255	0/1:18,11:30:116,0,254
+chr21	19488881	chr21:19488881:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:22:255,63,0,255,63,255	1/2:0,7,10:20:255,247,228,201,0,171	0/1:11,8,0:22:178,0,255,211,255,255
+chr21	19491193	chr21:19491193:M	TCTCTCTCTCTCTCTCTCTTCTC	<10.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,19:19:255,56,0	0/1:19,14:34:173,0,255
+chr21	19497486	chr21:19497486:M	AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0:12:0,34,183	0/1:7,13:24:160,0,41	0/0:14,1:17:0,30,210
+chr21	19501510	chr21:19501510:M	ATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,2:42:0,77,255	0/1:22,17:41:255,0,255	0/0:46,0:46:0,138,255
+chr21	19503371	chr21:19503371:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:1,27:28:255,64,0	1/1:0,34:34:255,100,0
+chr21	19503569	chr21:19503569:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,26,26:53:255,255,255,255,0,255	1/2:0,23,18:42:255,255,255,255,0,255	0/1:18,21,0:39:255,0,223,255,255,255
+chr21	19504846	chr21:19504846:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,3,4:7:106,125,189,71,106,96,53,80,0,66	1/2:0,21,7,0:31:255,148,164,255,0,255,255,221,255,255	0/3:3,0,1,9:13:122,158,255,140,255,255,0,63,27,27
+chr21	19509772	chr21:19509772:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,15:37:255,0,255	0/1:15,13:33:255,0,255	0/0:35,0:36:0,108,255
+chr21	19518955	chr21:19518955:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,28:29:255,87,0	0/1:11,15:29:255,0,221	0/1:16,16:33:255,0,255
+chr21	19524780	chr21:19524780:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,0,9:19:194,145,255,0,255,238	1/2:0,1,4:6:124,63,49,16,0,1	0/1:8,7,0:15:142,0,178,111,204,255
+chr21	19531621	chr21:19531621:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:17:201,0,4	1/1:3,23:27:255,27,0	0/0:21,1:23:0,50,255
+chr21	19533104	chr21:19533104:M	ACACACACACATACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,21:28:255,0,49	1/1:1,22:23:255,50,0	0/1:13,11:25:134,0,167
+chr21	19536416	chr21:19536416:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,2:47:0,102,255	0/0:35,2:39:0,79,255	0/1:22,18:41:205,0,255
+chr21	19536947	chr21:19536947:M	TATATATATATATATAT	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:28,0:31:0,61,179	0/0:8,0:8:0,16,46	0/1:7,12:22:27,0,10
+chr21	19543970	chr21:19543970:M	GTTTTTTGTTTGTTTTGTTTTTTTTTTGTTTTGTTTGTTTGTTTGTTT	<12.2>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:6,9:15:142,0,80	1/1:1,22:23:255,48,0	0/0:11,1:12:0,15,208
+chr21	19545826	chr21:19545826:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:4,0,103	1/1:0,6:7:94,17,0	0/0:9,0:10:0,29,156
+chr21	19546365	chr21:19546365:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	.	0/1:2,3:5:33,0,17	0/0:1,0:2:0,6,29
+chr21	19549187	chr21:19549187:M	TCTCTCTCTCTCTCTCTCTCTC	<7>,<9>,<10>	.	.	Motif=TC	GT:AD:DP:PL	0/2:13,7,12,1:33:238,99,255,0,142,223,157,142,146,247	1/2:0,20,7,0:30:255,145,77,255,0,255,255,84,255,255	0/3:7,0,1,10:20:86,127,255,77,255,230,0,91,75,44
+chr21	19549208	chr21:19549208:M	CACACACACACACACACACACACACACACACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,18:21:255,56,0	1/1:0,27:35:255,94,0	0/1:8,7:18:55,0,79
+chr21	19550359	chr21:19550359:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,13:29:154,0,210	0/1:19,13:32:133,0,238	0/0:16,2:18:0,17,252
+chr21	19551108	chr21:19551108:M	ATAGATAGGTAGGTAGGTAAATAGATTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<15.5>,<17.5>	.	.	Motif=ATAG	GT:AD:DP:PL	0/0:13,0,0:13:0,38,250,38,250,250	0/1:9,7,0:16:79,0,116,124,137,255	0/2:11,0,6:17:62,110,255,0,174,155
+chr21	19553279	chr21:19553279:M	ACACACACACATACACACACATACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:32:255,93,0	0/1:22,11:33:195,0,255	1/1:0,22:24:255,66,0
+chr21	19556560	chr21:19556560:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,42:44:255,93,0	0/1:20,11:32:101,0,255	1/1:0,29:29:255,85,0
+chr21	19563350	chr21:19563350:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:26:255,62,0	0/1:13,18:33:225,0,138	1/1:2,27:29:255,49,0
+chr21	19572358	chr21:19572358:M	CTCTCTCTCTTTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTC	<33.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:13,0:14:0,42,255	0/1:5,3:10:75,0,103	0/0:13,0:13:0,39,255
+chr21	19572418	chr21:19572418:M	CACACACACACACACACACACACACACACACACACACACACACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,2,9:11:254,122,92,33,5,0	2/2:0,0,8:8:192,124,102,24,22,0	1/2:0,7,3:11:242,40,19,90,0,60
+chr21	19574283	chr21:19574283:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/1:7,4:11:37,0,91	0/0:22,0:22:0,65,255
+chr21	19575396	chr21:19575396:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:20,9:29:70,0,255	0/0:38,0:39:0,114,255
+chr21	19577467	chr21:19577467:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:22:255,46,0	0/1:3,9:21:150,0,6	1/1:3,24:29:255,21,0
+chr21	19579446	chr21:19579446:M	TATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:22,0:24:0,71,255	0/1:5,7:12:160,0,104	0/0:14,0:14:0,42,255
+chr21	19582403	chr21:19582403:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:13,22:38:255,0,135	0/0:25,1:27:0,61,255
+chr21	19595617	chr21:19595617:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAGAAAAGAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,10:24:59,0,19	0/0:18,1:24:0,39,168	0/1:18,7:36:12,0,112
+chr21	19630647	chr21:19630647:M	GAGAGAGAGAGAGA	<9>	.	.	Motif=GA	GT:AD:DP:PL	0/1:12,16:28:255,0,251	0/1:8,16:25:255,0,149	0/1:14,14:28:255,0,255
+chr21	19632074	chr21:19632074:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<11>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:11,11:22:148,0,148	0/0:13,0:13:0,38,236	0/1:15,9:24:98,0,212
+chr21	19634033	chr21:19634033:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:200,0,171	0/1:15,9:24:87,0,192	0/1:23,15:38:159,0,255
+chr21	19634255	chr21:19634255:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,0,15:30:198,242,255,0,255,189	0/1:13,22,1:36:255,0,255,255,213,255	0/2:13,2,17:32:242,230,255,0,201,148
+chr21	19640047	chr21:19640047:M	TTTATGTATTTATGTATGTATGTATATATGTATGTATGTATGTATTTATTTATTTATTTATTTATTTATTT	<18.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:2,6:8:91,0,14	0/0:2,0:2:0,6,36	0/1:7,3:10:26,0,100
+chr21	19642719	chr21:19642719:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:119,20,0	0/1:1,2:5:24,0,9	0/0:2,0:2:0,6,35
+chr21	19661574	chr21:19661574:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:2,29:31:255,56,0	1/1:1,33:36:255,87,0
+chr21	19664497	chr21:19664497:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,9:22:106,0,135	0/1:14,11:27:109,0,180	0/0:21,0:23:0,65,255
+chr21	19672721	chr21:19672721:M	AAAAAAAAAAAACAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,9:32:74,0,255	0/1:16,14:32:153,0,216	0/0:36,1:38:0,93,255
+chr21	19672790	chr21:19672790:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,2:38:0,75,255	0/0:34,1:37:0,91,255	0/1:11,7:18:74,0,146
+chr21	19674852	chr21:19674852:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:29:255,0,122	0/0:33,2:35:0,67,255	0/1:23,24:47:255,0,255
+chr21	19689224	chr21:19689224:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<13.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,18:33:255,255,235,200,0,170	0/1:13,15,0:30:174,0,162,219,242,255	1/2:0,16,16:32:255,255,194,242,0,194
+chr21	19690717	chr21:19690717:M	TCCTTTCCTTT	<1.6>	.	.	Motif=TCCTT	GT:AD:DP:PL	0/0:44,0:45:0,124,255	0/0:44,0:44:0,132,255	0/1:18,26:45:255,0,255
+chr21	19692886	chr21:19692886:M	TTTTGTTTTTTGTTTTGTTTTTGTTTTTGTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,99,0	0/1:15,16:31:255,0,255	1/1:0,28:28:255,84,0
+chr21	19701141	chr21:19701141:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,3,1:4:111,108,106,17,17,5,51,51,0,39	1/1:0,1,0,0:1:31,3,0,30,3,29,31,3,29,31	1/3:0,3,0,3:8:170,79,67,127,46,114,90,0,77,80
+chr21	19702654	chr21:19702654:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:11:147,15,0	0/1:5,10:17:118,0,46	0/1:2,7:11:111,0,2
+chr21	19703633	chr21:19703633:M	ACACACACACACACACACACACAACATGCACACACACACACACA	<21>,<23>,<27>	.	.	Motif=AC	GT:AD:DP:PL	2/3:1,0,22,11:34:255,255,255,255,255,237,255,255,0,255	0/3:13,0,0,7:21:155,193,255,193,255,255,0,228,228,255	1/2:0,14,12,0:27:255,215,255,253,0,255,255,255,255,255
+chr21	19716793	chr21:19716793:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:23:0,50,255	0/0:21,1:22:0,47,255	0/1:20,16:37:185,0,245
+chr21	19732112	chr21:19732112:M	TATAGTATATATATATATGTGTATATGTCTATATATATATATATATATA	<23.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,7:17:80,0,136	0/1:4,1:5:3,0,55	0/1:9,10:19:126,0,107
+chr21	19737378	chr21:19737378:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,13,7:20:255,255,255,124,125,66,195,231,0,174	1/3:0,25,2,3:32:255,105,56,255,39,255,255,0,255,255	2/2:0,0,19,2:21:255,255,255,61,63,0,255,255,27,255
+chr21	19753579	chr21:19753579:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,10:30:255,186,101,255,0,255	1/2:1,17,11:30:255,188,122,237,0,227	2/2:1,3,32:36:255,255,255,70,39,0
+chr21	19758802	chr21:19758802:M	ACACACACACACACACACGCACACACACACAATACACACA	<19>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,12,0:22:166,0,128,226,164,255	0/1:14,17,0:31:216,0,162,255,213,255	0/2:17,1,18:36:232,255,255,0,251,223
+chr21	19761215	chr21:19761215:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,20:44:255,0,255	1/1:0,42:43:255,126,0	0/0:49,0:49:0,145,255
+chr21	19761608	chr21:19761608:M	TGTGTGTGTGTATGTGTGTGTGTGTATGTGTGTGTGTGTGTGTATGTGTGTGTG	<28>,<29>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,7,16:24:255,255,200,98,0,50	2/2:0,2,15:17:255,254,208,45,17,0	1/2:0,11,3:14:219,48,8,148,0,139
+chr21	19767479	chr21:19767479:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,19:39:239,0,248	1/1:1,23:25:255,55,0	0/0:31,0:31:0,91,255
+chr21	19772465	chr21:19772465:M	AAACAAACAAACAAACAAACAAACAAAAAACA	<9>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:22,12:34:118,0,255	0/0:27,0:27:0,80,255
+chr21	19773283	chr21:19773283:M	TATATATATATATATATATACACACATATATATACACATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	.	.	1/1:0,4:4:47,11,0
+chr21	19773353	chr21:19773353:M	TATATATATATATATATATATATATATATATATATATATATATAT	<11.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:1,0,0:5:0,6,52,6,52,52	0/0:0,0,0:1:0,3,22,3,22,22	1/2:0,10,4:16:255,48,18,255,0,255
+chr21	19774104	chr21:19774104:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:0,43:45:255,131,0	1/1:0,45:46:255,135,0
+chr21	19775100	chr21:19775100:M	CACACACACACACACACACACACACACACACACACACA	<18>,<20>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/3:1,12,2,7:25:255,167,161,255,139,255,167,0,255,255	3/3:0,0,0,27:29:255,255,255,255,255,255,87,87,87,0	1/2:0,14,13,0:28:255,202,255,227,0,255,255,255,255,255
+chr21	19789077	chr21:19789077:M	ACCCCCACCCCC	<2.2>	.	.	Motif=ACCCCC	GT:AD:DP:PL	0/1:19,13:32:239,0,255	0/0:24,0:24:0,72,255	0/1:20,9:29:145,0,255
+chr21	19790838	chr21:19790838:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:144,15,0	.	1/1:0,1:4:31,4,0
+chr21	19801794	chr21:19801794:M	TTTGTTTGCTTGTTTGTTTGTTTGTTTTTTG	<8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:18,11:29:207,0,255	1/1:0,35:35:255,105,0	0/0:30,0:30:0,90,255
+chr21	19804190	chr21:19804190:M	TGTGTGTGTGTGTGTGTG	<8>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,7:21:28,0,113	0/1:5,6:11:42,0,30	0/0:35,0:36:0,99,255
+chr21	19804207	chr21:19804207:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<15>,<16>	.	.	Motif=GA	GT:AD:DP:PL	0/2:15,2,17:34:255,208,255,0,255,255	1/2:0,5,16:21:255,219,158,70,0,9	0/1:16,12,0:31:221,0,255,171,255,255
+chr21	19804942	chr21:19804942:M	TGTTTTTTTTGTTGTTTGTTTTTTTGTTTTTTTTTTGTTTTGTTTTGTTTTG	<9.2>,<10.8>,<11>	.	.	Motif=TGTTT	GT:AD:DP:PL	1/2:0,9,9,1:19:255,239,216,255,0,242,255,140,254,255	1/1:0,14,0,0:14:255,42,0,255,42,255,255,42,255,255	2/3:0,0,4,5:9:251,252,254,90,90,64,70,71,0,45
+chr21	19806519	chr21:19806519:M	AAAAAAAAAAAAA	<10>,<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,25,1,23:49:255,255,255,255,255,255,255,0,255,255	1/1:0,49,1,0:50:255,150,0,255,129,255,255,147,255,255	2/3:0,0,19,14:33:255,255,255,222,255,165,255,255,0,255
+chr21	19807245	chr21:19807245:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:26:135,151,255,0,234,180	2/2:1,5,24:30:255,255,255,70,1,0	0/1:10,9,3:26:226,0,228,138,139,255
+chr21	19816728	chr21:19816728:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,17,23:41:255,255,255,255,0,214	1/1:0,34,0:34:255,100,0,255,100,255	2/2:0,1,41:43:255,255,255,126,108,0
+chr21	19821060	chr21:19821060:M	TGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,11:24:182,0,203	0/0:10,0:10:0,30,223	1/1:0,27:28:255,81,0
+chr21	19821070	chr21:19821070:M	TATATATATATATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:4,14:22:255,0,95	0/0:6,0:8:0,24,186	1/1:0,26:29:255,70,0
+chr21	19823974	chr21:19823974:M	TTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,2,4:19:59,30,255,0,255,255	1/2:0,3,9:12:251,131,99,44,0,10	0/0:30,0,0:33:0,98,255,98,255,255
+chr21	19829448	chr21:19829448:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,0:51:0,150,255	0/0:43,0:43:0,126,255	0/1:19,25:44:255,0,218
+chr21	19832180	chr21:19832180:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:44:0,111,255	0/0:35,3:38:0,58,255	0/1:23,23:47:255,0,255
+chr21	19832679	chr21:19832679:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/0:30,0:30:0,88,255	0/1:26,23:49:255,0,255
+chr21	19836593	chr21:19836593:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:17:255,30,0	1/1:0,28:29:255,85,0	0/1:16,15:31:183,0,201
+chr21	19846516	chr21:19846516:M	CTTTTCTTTTCTTTTTTTTTTTTCCTTTT	<6>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:26,0:26:0,77,255	0/1:10,7:17:97,0,161
+chr21	19846696	chr21:19846696:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,1:7:0,2,91	0/0:10,0:11:0,32,179	0/1:10,7:18:71,0,133
+chr21	19857142	chr21:19857142:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:92,0,101	0/0:16,1:18:0,36,255	1/1:1,9:10:138,12,0
+chr21	19861089	chr21:19861089:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:255,0,255	1/1:0,22:23:255,69,0	0/0:36,0:37:0,111,255
+chr21	19867626	chr21:19867626:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/1:24,29:53:255,0,255	1/1:0,44:45:255,132,0	0/1:17,20:37:255,0,211
+chr21	19868263	chr21:19868263:M	CTCTCTGTCTCTCTCTCTCTCTCTCTCTC	<11.5>,<12.5>	.	.	Motif=CT	GT:AD:DP:PL	0/2:10,1,14:29:255,206,255,0,255,234	2/2:0,2,22:24:255,255,255,72,38,0	0/1:18,13,0:32:255,0,255,204,255,255
+chr21	19868291	chr21:19868291:M	CACACACACACACACACACACAC	<12.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:18,6,6:32:93,91,242,0,148,255	1/2:0,11,11:25:255,255,255,125,0,255	0/2:17,0,0:27:72,88,224,0,190,255
+chr21	19872748	chr21:19872748:M	AATAAATAAATAAATAAATAAATAAATAAATAAAT	<7.8>,<10.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:18,13,0:31:162,0,255,250,255,255	1/1:0,32,0:32:255,94,0,255,96,255	0/2:10,0,11:21:255,255,255,0,186,231
+chr21	19884356	chr21:19884356:M	GTGTGTGTGTGTGTGTGTCTGTGTGTCTGTGTCTGTGTGTCTTGTGTATGTGTG	<28>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,9:20:111,0,149	1/1:0,21:21:255,62,0	0/1:14,4:18:21,0,205
+chr21	19885166	chr21:19885166:M	AAAAAAAAAAAATAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:45,0:45:0,132,255	0/1:21,9:30:77,0,255
+chr21	19892061	chr21:19892061:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,8:19:93,0,150	1/1:1,19:20:255,41,0	0/1:10,9:20:116,0,124
+chr21	19898883	chr21:19898883:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	<10>,<11>	.	.	Motif=TC	GT:AD:DP:PL	0/1:7,11,0:19:255,0,153,193,179,255	1/1:0,21,0:23:255,68,0,255,64,255	0/2:11,1,5:17:97,69,255,0,255,255
+chr21	19907271	chr21:19907271:M	AAAAAAAAAAAAAAAAAAAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:84,15,0	.	0/1:1,2:3:24,0,8
+chr21	19908336	chr21:19908336:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:3,22:29:255,31,0	1/1:3,36:42:255,68,0
+chr21	19913097	chr21:19913097:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:24:203,0,94	1/1:0,26:28:255,81,0	0/0:26,4:31:0,19,255
+chr21	19923167	chr21:19923167:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,11:28:131,0,242	0/0:8,0:8:0,24,144	1/1:0,19:19:255,56,0
+chr21	19923189	chr21:19923189:M	ATATATATATTTTATATATAATTATATATTAATGATATTAATATATATATATATATATAT	<29>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:9:172,27,0	1/1:0,2:2:35,6,0	1/1:0,7:7:130,21,0
+chr21	19927431	chr21:19927431:M	AAAGAAAGAAAAGAAAGAAAGA	<4.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:23,9:32:12,0,163	0/0:27,0:27:0,71,255	0/1:14,5:19:3,0,99
+chr21	19927503	chr21:19927503:M	GAAAGGAAGAAAGAAAAGACAAGAAAGAAAGACAAGAAA	<10>	.	.	Motif=GAAA	GT:AD:DP:PL	0/0:25,0:25:0,37,95	0/0:32,0:34:0,49,125	0/1:16,14:34:5,0,21
+chr21	19927539	chr21:19927539:M	AAAATAAAAAAAGAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:30,0:30:0,88,255	0/1:13,11:24:135,0,172
+chr21	19930365	chr21:19930365:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:29:173,0,191	1/1:1,35:42:255,103,0	0/1:12,27:43:255,0,91
+chr21	19932510	chr21:19932510:M	TGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/0:25,0:26:0,68,255	0/1:25,14:42:255,0,255
+chr21	19932524	chr21:19932524:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,16:21:210,33,0	1/1:4,20:25:210,20,0	1/1:4,18:24:198,16,0
+chr21	19945535	chr21:19945535:M	TGTTTGTTTGT	<1.8>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:38,0:38:0,111,255	0/0:34,0:34:0,99,255	0/1:18,18:36:192,0,193
+chr21	19954852	chr21:19954852:M	TTTATTTTATTTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<12.5>,<12.8>	.	.	Motif=TTTA	GT:AD:DP:PL	2/2:0,0,18:18:255,255,255,53,54,0	2/2:0,0,7:7:128,138,152,21,21,0	1/2:0,9,9:18:255,154,141,189,0,141
+chr21	19955308	chr21:19955308:M	ATATATATATGTATTTATGTATACATATATATATTTATGTATACATACATATGTATTTATGTGTATATATAT	<2.5>	.	.	Motif=ATAT	GT:AD:DP:PL	0/1:7,12:22:255,0,102	1/1:1,7:8:255,1,0	0/1:10,8:18:255,0,175
+chr21	19970267	chr21:19970267:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<10>,<13>,<14>	.	.	Motif=CCTT	GT:AD:DP:PL	0/2:15,0,6,0:21:51,112,255,0,255,220,96,255,255,255	0/3:6,0,0,12:18:255,255,255,208,255,255,0,158,104,121	1/2:0,9,13,0:23:255,235,255,243,0,209,255,231,244,255
+chr21	19970328	chr21:19970328:M	TTCTTTTCTTTTTTTTTTTTTTTTTTCT	<5.4>	.	.	Motif=TTCTT	GT:AD:DP:PL	1/1:0,4:5:73,14,0	1/1:0,2:3:43,9,0	1/1:0,5:5:75,14,0
+chr21	19972118	chr21:19972118:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:113,15,0	1/1:0,6:6:180,18,0	1/1:1,6:11:203,3,0
+chr21	19976356	chr21:19976356:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGGAAAAGAAAAAGAGAAAAAGAAAAAAAA	<54>,<55>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,2:13:0,33,255,2,197,162	0/2:7,0,3:10:23,44,211,0,117,90	0/1:5,4,0:9:96,0,113,70,86,132
+chr21	19977966	chr21:19977966:M	AAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,20:28:255,255,255,103,0,29	1/2:0,7,17:25:255,255,218,119,0,48	0/2:5,2,11:19:255,155,255,0,93,85
+chr21	19983891	chr21:19983891:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	<10.8>,<11.8>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:12,8,7:27:97,0,175,21,61,72	1/2:2,8,7:17:159,35,44,59,0,36	0/2:14,0,9:23:31,72,255,0,140,81
+chr21	19983947	chr21:19983947:M	CATACATACATACATACATA	<6>,<7>	.	.	Motif=CATA	GT:AD:DP:PL	1/2:0,18,24:49:255,213,159,100,0,132	0/1:12,19,0:33:134,0,74,176,162,255	1/2:3,14,19:36:255,190,129,99,0,102
+chr21	19985279	chr21:19985279:M	TGTGTGTGTGTGTGTGTGTGCGCATGTGGTGTGTGTCTATGTGTGTGTGT	<24>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,19:19:255,56,0	1/1:0,21:22:255,64,0
+chr21	19986791	chr21:19986791:M	TTTTTTTTGTTTTTTTTTTT	<21>,<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,4,12:16:255,255,255,190,190,144,65,64,0,17	3/3:0,0,1,24:25:255,255,255,255,255,255,75,75,57,0	1/2:1,18,8,0:27:255,184,138,255,0,255,255,123,255,255
+chr21	19990678	chr21:19990678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,43:45:255,96,0	1/1:2,31:33:255,62,0	1/1:1,39:41:255,92,0
+chr21	19992034	chr21:19992034:M	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<12.2>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:13,8:21:92,0,189	0/1:3,0:5:7,0,40	0/1:12,8:20:91,0,167
+chr21	20008399	chr21:20008399:M	CACACACACACACACACACACACACAC	<15.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:3,20,0:24:255,0,10,255,77,255	0/1:2,15,0:20:255,0,1,255,58,255	1/2:1,13,16:33:255,255,255,255,0,255
+chr21	20012563	chr21:20012563:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:0,23:23:255,67,0	1/1:1,34:36:255,88,0
+chr21	20018873	chr21:20018873:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,14:25:194,0,112	1/1:0,29:32:255,93,0	0/1:5,13:19:188,0,35
+chr21	20034153	chr21:20034153:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:22:135,0,136	0/0:22,2:25:0,38,255	0/1:5,6:14:70,0,78
+chr21	20034579	chr21:20034579:M	TATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTCTATCT	<13>,<19.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,8,5:13:255,95,107,208,0,194	1/1:0,17,0:17:255,51,0,255,51,255	1/2:0,8,6:14:255,111,132,210,0,192
+chr21	20039938	chr21:20039938:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,79,0	1/1:1,30:31:255,73,0	1/1:2,28:30:255,52,0
+chr21	20044416	chr21:20044416:M	TTTTTTTTTTTTTT	<15>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,13,1,3:19:255,72,46,247,62,255,230,0,227,255	1/1:1,23,1,0:25:255,55,0,255,56,255,255,75,255,255	2/3:0,2,12,7:21:255,255,255,180,149,142,255,179,0,255
+chr21	20047228	chr21:20047228:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,14:31:176,0,196	0/0:31,2:35:0,67,255	0/1:17,19:38:236,0,200
+chr21	20047917	chr21:20047917:M	ACAACAACAACAACAACAACAA	<6.3>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:14,23:37:255,0,162	0/0:35,0:36:0,97,255	0/1:20,22:42:255,0,253
+chr21	20052105	chr21:20052105:M	TTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6,0:26:107,0,255,115,255,255	1/2:0,5,3:9:244,52,26,95,0,71	0/1:16,3,0:20:43,0,255,53,255,255
+chr21	20052179	chr21:20052179:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13:26:176,0,147	1/1:2,22:24:255,35,0	0/1:17,11:30:131,0,222
+chr21	20056199	chr21:20056199:M	GTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<8.8>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:1,25:26:255,58,0	1/1:0,24:24:255,71,0
+chr21	20060660	chr21:20060660:M	AAAAGAAAAGAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,30:31:255,91,0	1/1:1,23:24:255,52,0
+chr21	20069438	chr21:20069438:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:1,34:35:255,85,0	1/1:0,38:38:255,112,0
+chr21	20075680	chr21:20075680:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:2,26:28:255,47,0	1/1:3,27:31:255,37,0
+chr21	20083115	chr21:20083115:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:21:0,62,255	0/1:14,10:25:100,0,180	0/1:17,11:30:109,0,235
+chr21	20089392	chr21:20089392:M	AAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,60,0	1/1:0,11:14:255,41,0	1/1:0,15:17:255,51,0
+chr21	20105937	chr21:20105937:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,7:9:216,121,97,26,0,1	1/2:0,4,2:7:173,34,13,78,0,60	1/2:0,4,5:9:239,86,60,69,0,43
+chr21	20106411	chr21:20106411:M	TCATCATTATCATTATCAATCATCATCA	<11.3>	.	.	Motif=TCA	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,24:24:255,72,0	1/1:0,28:28:255,84,0
+chr21	20110850	chr21:20110850:M	TGTTTGTTTGTTTGTTTGTTT	<6.2>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,35:35:255,103,0	1/1:0,36:36:255,106,0
+chr21	20111612	chr21:20111612:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,19,5:26:255,95,24,255,0,255	1/2:0,10,10:20:255,167,109,167,0,110	2/2:0,1,20:22:255,255,255,62,44,0
+chr21	20115343	chr21:20115343:M	TTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:37:255,110,0	1/1:0,35:37:255,110,0	1/1:0,27:28:255,84,0
+chr21	20116311	chr21:20116311:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,35:37:255,105,0	1/1:0,47:50:255,146,0
+chr21	20119173	chr21:20119173:M	TTTTTTTTTTTTTTTATTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:2,21:23:255,33,0	1/1:1,21:26:255,57,0
+chr21	20127279	chr21:20127279:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,33:33:255,99,0	1/1:0,23:24:255,72,0
+chr21	20129453	chr21:20129453:M	TTCTTCTTCTTC	<3>	.	.	Motif=TTC	GT:AD:DP:PL	1/1:0,50:50:255,148,0	1/1:0,34:34:255,100,0	1/1:0,40:40:255,118,0
+chr21	20133811	chr21:20133811:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,21:25:255,54,0	1/1:1,16:19:255,38,0	1/1:1,25:28:255,64,0
+chr21	20134855	chr21:20134855:M	ACACGACACACACACACGCACACACACACACACACACACA	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,27:28:255,81,0	1/1:0,23:26:255,72,0
+chr21	20141171	chr21:20141171:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:221,24,0	0/1:1,4:6:91,0,36	1/1:0,4:4:110,12,0
+chr21	20142639	chr21:20142639:M	TTATTATTATTATTATTATTATTATTATTATTACTATTATT	<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10:10:190,30,0	1/1:0,6:7:117,20,0	1/1:0,11:11:204,32,0
+chr21	20154733	chr21:20154733:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:13:179,19,0	0/1:3,14:19:195,0,6	1/1:2,22:26:255,40,0
+chr21	20155732	chr21:20155732:M	CCCCCCCCCCCCC	<14>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:2,22:24:255,36,0	1/1:2,19:22:255,29,0
+chr21	20161968	chr21:20161968:M	TATATATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,28:33:255,78,0	1/1:0,19:21:255,62,0	1/1:1,35:37:255,91,0
+chr21	20162432	chr21:20162432:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:67,12,0	1/1:0,0:2:13,3,0	0/1:1,2:3:24,0,8
+chr21	20169966	chr21:20169966:M	ACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:2,29:31:255,57,0	1/1:0,22:22:255,64,0
+chr21	20173559	chr21:20173559:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,7:10:191,106,97,13,0,18	1/2:0,3,9:12:255,151,118,43,0,16	2/2:0,0,10:10:255,203,176,30,29,0
+chr21	20192660	chr21:20192660:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,20:22:255,65,0	1/1:0,32:38:255,102,0
+chr21	20197845	chr21:20197845:M	ACACAGACACACACACACACACACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,45,0	1/1:0,18:21:255,62,0	1/1:0,26:26:255,78,0
+chr21	20199490	chr21:20199490:M	TTTTTTTTTTTAATGTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,23:23:255,69,0	1/1:0,20:20:255,60,0
+chr21	20204340	chr21:20204340:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:3,46:50:255,94,0	1/1:3,38:43:255,71,0
+chr21	20216880	chr21:20216880:M	AGAGGAGAGAGAAAAAGAAGAGAGAAGAAAGAGGAGAGAGA	<6>	.	.	Motif=AG	GT:AD:DP:PL	0/1:23,5:28:35,0,255	0/1:26,9:35:127,0,255	0/0:33,4:37:0,13,255
+chr21	20222867	chr21:20222867:M	TTTTTCTTTTCTTTTTTTTTTTCTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:139,12,0	1/1:0,10:10:166,29,0	1/1:0,12:12:205,35,0
+chr21	20229545	chr21:20229545:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<12.6>,<13.6>,<14.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/3:0,7,0,4:11:226,110,89,190,76,179,133,0,132,179	2/3:0,0,4,4:8:219,180,168,72,71,49,72,61,0,49	1/2:0,6,5,0:11:231,93,61,95,0,80,204,79,111,243
+chr21	20230494	chr21:20230494:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:3,10,3,0:16:134,7,47,127,0,254,171,59,255,255	1/3:0,11,2,5:19:255,129,117,237,49,255,184,0,255,255	0/2:2,0,6,2:10:95,118,204,0,29,5,51,101,0,97
+chr21	20244101	chr21:20244101:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6,2:10:91,0,4,49,1,98	1/2:0,5,7:13:255,125,89,65,0,41	1/2:0,9,4:13:222,64,27,119,0,107
+chr21	20254488	chr21:20254488:M	AAAAAAGAAAAAAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAAAAAAGAAAAAA	<57>,<58>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,11:17:160,178,255,0,112,64	0/1:10,8,0:18:173,0,231,140,176,255	1/2:0,5,8:13:253,126,111,91,0,55
+chr21	20256071	chr21:20256071:M	ACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,9,0:18:255,156,104,150,0,99,255,156,150,255	1/3:1,9,0,6:17:255,148,154,255,180,255,232,0,148,236	2/2:0,0,21,0:21:255,255,255,63,61,0,255,255,63,255
+chr21	20262640	chr21:20262640:M	TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT	<14.3>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:7,0:7:0,21,124	0/1:3,5:8:68,0,31
+chr21	20274542	chr21:20274542:M	GGAAGGAGGGAAGGAAGGACGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	<18.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,6:6:110,18,0	1/1:0,5:5:87,15,0	.
+chr21	20274922	chr21:20274922:M	ACACACACACACACACACACACACACACATACACA	<14.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:15,0,19:36:255,255,255,0,255,249	0/2:21,0,13:36:196,255,255,0,255,255	0/1:20,21,0:44:255,0,255,255,255,255
+chr21	20280929	chr21:20280929:M	TATATATATATATAAAAATGTCTATATATATATATATA	<20>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,17:33:245,0,185	0/1:6,4:10:42,0,77	0/0:18,0:18:0,53,255
+chr21	20286018	chr21:20286018:M	TTTTTTTTTTTTTTTTTCTTTTT	<21>,<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:2,0,17,0:19:255,255,255,19,55,0,255,255,51,255	2/2:0,2,20,0:22:255,255,255,64,30,0,255,255,65,255	1/3:1,8,2,5:16:255,66,119,177,101,210,199,0,104,220
+chr21	20291667	chr21:20291667:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,0,1	0/0:0,0:4:0,4,16	1/1:0,3:3:89,9,0
+chr21	20293211	chr21:20293211:M	ACACACACACACACACACACACAC	<16>,<17>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,9:23:194,151,255,0,255,255	0/1:13,8,0:22:174,0,255,144,255,255	1/2:0,13,12:25:255,211,140,229,0,159
+chr21	20296069	chr21:20296069:M	AAAAAAAAAAAAAAGAAAGAAAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,7,8:21:255,172,185,80,0,189	1/2:1,14,8:26:255,209,172,228,0,255	1/2:0,16,13:29:255,255,255,255,0,255
+chr21	20300407	chr21:20300407:M	ATATATATATATATATATATATATATATA	<6.5>,<8>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,9:18:255,143,96,132,0,82	1/2:0,7,4:12:255,62,32,112,0,81	1/1:0,19,0:24:255,69,0,255,43,255
+chr21	20301970	chr21:20301970:M	AAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:14:218,0,22	0/1:2,10:15:239,0,23	0/1:2,13:16:255,0,18
+chr21	20305495	chr21:20305495:M	TTATTATTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:18,25:43:255,0,222	0/1:17,22:39:255,0,194	0/1:18,23:41:255,0,217
+chr21	20308330	chr21:20308330:M	ACACACACACACACACACACACACACACA	<13.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,21:21:255,255,255,62,63,0	0/2:15,2,6:23:39,70,255,0,188,223	1/2:1,16,7:25:255,110,135,255,0,255
+chr21	20308357	chr21:20308357:M	CATGCGTGCACGCATGCATGCA	<6.5>	.	.	Motif=CATG	GT:AD:DP:PL	1/1:0,23:24:255,68,0	1/1:0,18:18:255,53,0	0/1:19,11:32:106,0,255
+chr21	20315482	chr21:20315482:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:41:255,118,0	1/1:0,30:32:255,93,0	0/1:15,12:27:143,0,198
+chr21	20318169	chr21:20318169:M	TATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,1:12:2,0,224	0/1:8,6:16:130,0,161	0/0:37,0:39:0,116,255
+chr21	20318188	chr21:20318188:M	ATACACACACACACACATACATACATACATACATA	<9.2>,<10.2>,<10.8>	.	.	Motif=ATAC	GT:AD:DP:PL	1/3:0,3,0,19:22:255,255,255,190,164,148,26,0,35,4	1/3:0,8,1,9:20:241,173,150,120,69,143,57,0,107,133	0/2:6,0,18,9:33:255,255,255,0,49,38,77,116,34,138
+chr21	20324165	chr21:20324165:M	TTTTTTCTTTTTTCTTCTCTTTTTTTTTTTTTT	<32>,<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8,0:16:99,0,99,144,145,255	0/1:14,9,0:24:97,0,172,163,239,255	1/2:0,12,10:23:255,255,224,210,0,255
+chr21	20326468	chr21:20326468:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:8:17,0,52	0/0:7,0:9:0,24,128	0/1:7,3:10:22,0,89
+chr21	20336857	chr21:20336857:M	ACACACACACACACGTACACACACACACACACACACACACACACACACACACA	<21.5>,<24.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,9,0,9:18:255,159,255,255,159,255,255,0,255,242	1/2:0,10,7,0:18:255,213,201,255,0,255,255,118,255,255	2/3:0,0,8,6:14:255,255,255,87,104,63,139,140,0,98
+chr21	20340932	chr21:20340932:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,14:32:188,0,178	0/1:13,18:33:240,0,132	0/1:23,14:44:171,0,255
+chr21	20344582	chr21:20344582:M	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTAT	<6.6>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,20:20:255,60,0	1/1:0,23:25:255,75,0
+chr21	20345787	chr21:20345787:M	ACACACACACACACACACACACACACACA	<13.5>,<18.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/4:0,14,0,0,4:19:255,114,70,255,112,255,255,72,255,255,255,0,255,255,255	1/3:0,11,0,8,0:21:255,231,196,255,127,255,198,0,255,255,255,139,255,255,255	2/4:0,0,7,1,6:15:255,255,255,170,170,140,225,225,91,184,209,209,0,117,184
+chr21	20351847	chr21:20351847:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,4,13:32:148,163,255,0,163,229	2/2:1,0,27:29:255,255,255,67,84,0	0/1:16,14,0:30:167,0,203,251,245,255
+chr21	20353330	chr21:20353330:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:20:0,38,255	0/0:23,0:24:0,70,255	0/1:13,11:25:126,0,153
+chr21	20354998	chr21:20354998:M	CACACACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,16:31:224,0,200	1/1:0,36:36:255,106,0	0/0:40,0:40:0,118,255
+chr21	20360344	chr21:20360344:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:16:0,44,255	0/0:21,2:27:0,41,255	0/1:14,7:24:53,0,207
+chr21	20365894	chr21:20365894:M	TTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,17,0:18:255,35,0,255,54,255	1/1:0,16,0:21:255,57,0,255,59,255	1/2:2,10,8:22:255,169,191,133,0,255
+chr21	20367038	chr21:20367038:M	TTTTCTTTTCTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:44,2:47:0,101,255	0/0:37,1:38:0,94,255	0/1:18,19:37:241,0,220
+chr21	20367366	chr21:20367366:M	TTTTCTTTTTTCTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,35:35:255,103,0	1/1:0,39:39:255,115,0
+chr21	20371170	chr21:20371170:M	AAAAAAAAAAAAAAAAAA	<14>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27,0:28:255,81,0,255,81,255	1/1:0,32,0:33:255,99,0,255,99,255	1/2:0,17,11:31:255,193,228,255,0,255
+chr21	20374052	chr21:20374052:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:1,30:31:255,73,0	0/1:18,10:30:97,0,253
+chr21	20374840	chr21:20374840:M	AAAAAAAAAAAAAGAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,12:19:162,0,54	0/1:6,8:16:99,0,65	1/1:0,17:17:255,50,0
+chr21	20377229	chr21:20377229:M	ATATATATATATATATATATATATATATATATCATATATAGATATGGTATATATA	<28.5>,<30.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,6,0:11:81,0,34,99,64,255	0/0:0,0,0:1:0,3,12,3,13,14	2/2:0,0,3:5:118,105,100,15,12,0
+chr21	20377292	chr21:20377292:M	TCTATCTATCTATCCATCTATCTATCTATCTATCTATC	<8.5>	.	.	Motif=TCTA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,19:19:255,56,0	1/1:0,17:17:255,50,0
+chr21	20381138	chr21:20381138:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAACAAATA	<12.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,14:14:255,41,0	1/1:0,9:9:163,26,0	0/1:17,10:27:107,0,238
+chr21	20381646	chr21:20381646:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:219,30,0	1/1:1,7:10:103,1,0	1/1:1,9:11:153,14,0
+chr21	20391009	chr21:20391009:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:28:0,63,255	0/0:20,0:23:0,67,255	0/1:18,15:34:181,0,224
+chr21	20393082	chr21:20393082:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:24:255,45,0	1/1:2,19:22:255,11,0	0/1:21,8:30:138,0,255
+chr21	20396019	chr21:20396019:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,11:40:171,0,255	0/1:19,28:47:255,0,255	0/0:32,0:34:0,99,255
+chr21	20398635	chr21:20398635:M	ATATATATATATATATATA	<8.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,27:28:255,255,255,82,84,0	2/2:1,0,21:22:255,255,255,47,63,0	1/2:2,19,15:36:255,238,255,255,0,255
+chr21	20402917	chr21:20402917:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,49:51:255,113,0	1/1:4,37:41:255,49,0	1/1:1,43:44:255,111,0
+chr21	20405735	chr21:20405735:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,49:50:255,129,0	1/1:0,52:52:255,154,0
+chr21	20423055	chr21:20423055:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:34:255,98,0	1/1:4,23:29:255,16,0	1/1:1,22:26:255,58,0
+chr21	20430762	chr21:20430762:M	TATATATATACATATATATATATACACATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,10:22:39,0,243	0/0:0,0:1:0,0,0	0/1:5,3:8:8,0,103
+chr21	20430814	chr21:20430814:M	TATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,10:11:88,2,0	0/0:1,0:1:0,3,28	0/1:1,3:4:24,0,16
+chr21	20430941	chr21:20430941:M	ATATATAGTCATATATATGTAACATATATACTCATATATATAACATATATAGTCATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,10:26:47,0,255	0/0:8,0:9:0,24,213	0/0:16,3:20:0,21,255
+chr21	20435496	chr21:20435496:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:52,0,2	0/1:0,2:3:23,0,3	0/1:1,2:3:24,0,8
+chr21	20440482	chr21:20440482:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,22:35:255,0,133	1/1:0,30:32:255,93,0	0/1:15,16:31:192,0,175
+chr21	20441660	chr21:20441660:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,15:19:217,0,1	0/1:10,10:22:116,0,116	0/1:8,8:17:101,0,91
+chr21	20445754	chr21:20445754:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,12:22:158,0,96	0/1:15,9:25:79,0,190	0/1:11,9:22:103,0,137
+chr21	20449355	chr21:20449355:M	ACACACACACACACACACACACACACACACACACACATACAC	<17>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,9,15:24:255,208,139,127,0,56	1/2:0,12,10:25:255,137,64,194,0,125	1/2:0,7,20:28:255,255,198,90,0,18
+chr21	20449540	chr21:20449540:M	ATATATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,35:38:255,109,0	1/1:0,20:21:255,61,0	1/1:1,37:41:255,99,0
+chr21	20449926	chr21:20449926:M	TATATATACATATATATGTGTATATATATATATATGTGTATATATATATATATATATATATATATATA	<24>,<27>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,10:19:255,255,248,160,0,117	1/1:0,4,0:5:186,15,0,142,15,129	1/2:0,1,1:4:91,23,14,57,0,51
+chr21	20450745	chr21:20450745:M	AGAAAAAAAAAAAGAAAAAGAA	<3.5>	.	.	Motif=AGAAAA	GT:AD:DP:PL	1/1:1,30:32:255,71,0	1/1:0,28:28:255,84,0	1/1:0,39:39:255,116,0
+chr21	20454899	chr21:20454899:M	TTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:16:255,47,0	1/1:0,9:17:255,47,0	1/1:0,11:12:255,36,0
+chr21	20460618	chr21:20460618:M	ACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,2:4:97,12,0	1/1:0,3:5:116,14,0	1/1:0,9:11:255,33,0
+chr21	20460632	chr21:20460632:M	AGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAAGAGA	<22.5>,<23.5>,<24.5>	.	.	Motif=AG	GT:AD:DP:PL	1/3:0,4,2,4:11:253,97,69,89,28,60,107,0,39,85	2/3:0,1,4,4:10:243,144,120,62,47,33,61,27,0,33	1/2:0,8,5,0:18:255,55,14,126,0,101,255,51,144,255
+chr21	20465604	chr21:20465604:M	ATATATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,28:28:255,84,0	1/1:0,38:39:255,117,0	1/1:0,36:36:255,108,0
+chr21	20466933	chr21:20466933:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:32:255,94,0	0/1:17,17:34:202,0,201	1/1:0,30:30:255,88,0
+chr21	20468084	chr21:20468084:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:7,0,22	0/1:1,4:5:46,0,1	0/1:1,3:4:35,0,4
+chr21	20475867	chr21:20475867:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:16:240,0,84	0/1:3,9:14:200,0,48	0/1:2,5:10:119,0,35
+chr21	20476756	chr21:20476756:M	TTATTATTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,38:38:255,113,0	1/1:0,33:33:255,97,0	1/1:0,39:40:255,118,0
+chr21	20481093	chr21:20481093:M	TTTTTTTTTATTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,40:40:255,120,0	1/1:0,43:43:255,129,0
+chr21	20482033	chr21:20482033:M	TGTGTGTGTGTGTGTGTGT	<12.5>,<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,26,19,0:46:255,255,255,255,0,255,255,255,255,255	1/3:0,17,1,15:35:255,255,255,255,239,255,255,0,255,255	1/2:0,23,18,0:41:255,255,255,255,0,255,255,255,255,255
+chr21	20482533	chr21:20482533:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:2,25:28:255,48,0	0/1:10,10:23:121,0,112
+chr21	20487619	chr21:20487619:M	AAAAAAACAAAAACAAAAACAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,23:46:255,0,255	0/1:25,19:44:255,0,255	1/1:0,37:37:255,111,0
+chr21	20488919	chr21:20488919:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,28:33:255,41,0	1/1:0,41:42:255,123,0	1/1:0,42:43:255,127,0
+chr21	20489184	chr21:20489184:M	ATATATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,25:25:255,74,0	0/1:20,17:37:209,0,255
+chr21	20493740	chr21:20493740:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5:18:37,0,172	0/1:9,9:19:98,0,108	1/1:0,21:23:255,66,0
+chr21	20500999	chr21:20500999:M	TGTGGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,5:18:255,110,88,197,0,255	1/2:0,13,7:23:255,186,136,227,0,255	1/2:1,9,10:20:255,242,226,140,0,210
+chr21	20503564	chr21:20503564:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,21,17:38:255,255,211,255,0,255	1/2:1,15,17:33:255,238,219,247,0,171	1/2:2,22,15:39:255,200,185,255,0,255
+chr21	20508543	chr21:20508543:M	TTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTT	<7.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:16,16:32:255,0,255	0/1:14,12:26:246,0,255	0/1:15,7:22:123,0,255
+chr21	20512491	chr21:20512491:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,11:26:140,155,255,0,229,178	0/2:26,1,26:54:255,255,255,0,255,255	0/1:13,20,0:33:255,0,255,255,231,255
+chr21	20535561	chr21:20535561:M	TTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,13:19:255,0,32	0/1:4,12:18:255,0,62	1/1:0,16:20:255,53,0
+chr21	20539643	chr21:20539643:M	CACACACACACACACACACACACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,17:39:196,0,255	0/1:14,25:40:255,0,136	0/1:24,18:43:197,0,255
+chr21	20553094	chr21:20553094:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,13,0,12:26:255,216,255,255,255,255,255,0,244,255	2/3:1,0,11,15:27:255,255,255,241,255,255,171,189,0,238	1/3:2,14,0,12:29:255,175,255,255,255,255,255,0,251,255
+chr21	20554292	chr21:20554292:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,30:31:255,89,0	1/1:0,11:15:189,25,0	0/1:5,16:21:225,0,28
+chr21	20560947	chr21:20560947:M	AAAAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:32:193,0,203	0/0:26,1:28:0,64,255	0/0:33,0:33:0,97,255
+chr21	20563377	chr21:20563377:M	GTTTTTTTGTTTGTTTGTTTTTGTTTGTTTGTTTTTTGTTTGTTT	<7.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/1:15,11:26:221,0,255	0/0:21,0:21:0,63,255
+chr21	20568009	chr21:20568009:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:19:34,0,196	0/1:16,4:20:10,0,215	0/1:15,3:23:17,0,219
+chr21	20572427	chr21:20572427:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:39:0,69,255	0/1:31,13:46:110,0,255	0/0:31,2:33:0,61,255
+chr21	20577323	chr21:20577323:M	AAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/1:12,10:25:207,0,255	0/0:17,0:23:0,67,255
+chr21	20579932	chr21:20579932:M	ACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:15,9:24:183,0,255	0/0:35,0:35:0,105,255
+chr21	20581354	chr21:20581354:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:39:0,115,255	0/1:25,23:51:255,0,255	0/0:32,0:37:0,110,255
+chr21	20584235	chr21:20584235:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,7:20:255,87,77,193,0,155	1/2:0,4,9:16:246,126,108,86,0,48	1/2:2,10,6:18:255,53,74,137,0,122
+chr21	20587000	chr21:20587000:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,15:16:255,44,0	1/1:0,2:2:37,6,0	1/1:0,14:14:255,41,0
+chr21	20587092	chr21:20587092:M	ACACACACACACACACACACACACACACACACACAC	<15>,<16>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,3,3:7:157,49,31,49,0,31	1/1:0,5,0:6:151,16,0,95,15,80	1/2:0,0,4:6:125,64,47,21,0,7
+chr21	20587129	chr21:20587129:M	TATATATATATATATATATATA	<9>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,5,4:11:149,46,31,113,0,122	2/2:0,0,1:1:14,14,14,3,3,0	1/1:0,7,1:10:189,24,0,195,13,235
+chr21	20587199	chr21:20587199:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,10:25:92,0,158	1/1:1,12:13:171,22,0	0/1:13,9:22:80,0,144
+chr21	20587266	chr21:20587266:M	TATATATATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,10:20:255,0,110	0/0:5,0:6:0,15,153	0/1:3,10:15:255,0,60
+chr21	20587529	chr21:20587529:M	TATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,9:29:26,0,255	0/0:19,2:21:0,38,255	0/0:14,1:15:0,33,255
+chr21	20587560	chr21:20587560:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,10:20:131,0,112	1/1:0,10:10:177,29,0	0/1:9,6:15:65,0,120
+chr21	20587665	chr21:20587665:M	TATATATATATATATATATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:9:121,25,0	1/1:0,2:2:27,6,0	1/1:0,1:2:13,3,0
+chr21	20587710	chr21:20587710:M	GTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,2:6:19,0,57	0/0:5,0:5:0,15,88	1/1:0,5:5:88,15,0
+chr21	20587723	chr21:20587723:M	TATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,9:17:62,0,178	0/1:5,2:7:4,0,121	0/0:6,1:7:0,9,158
+chr21	20587746	chr21:20587746:M	GTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,2:2:83,6,0	1/1:0,1:3:71,9,0	1/1:0,5:5:209,15,0
+chr21	20587767	chr21:20587767:M	TATATATATATATATATATATATATATATATATGTATATGTATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:9:126,26,0	1/1:0,2:3:28,6,0	1/1:0,1:1:14,3,0
+chr21	20587849	chr21:20587849:M	TATATATAGATATATATATCTATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,9:19:54,0,221	0/1:6,2:8:0,0,142	0/0:6,1:7:0,9,155
+chr21	20587901	chr21:20587901:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,9:16:57,0,146	0/0:9,1:10:0,18,236	0/0:7,1:8:0,13,215
+chr21	20587923	chr21:20587923:M	TATAATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,9:14:69,0,100	0/0:7,1:8:0,12,184	0/0:7,0:7:0,21,199
+chr21	20587966	chr21:20587966:M	TATATATATATATATATATATATATATATATA	<13>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,1,9:12:189,101,92,89,0,65	2/2:0,0,1:1:14,14,14,3,3,0	1/1:0,3,0:4:117,12,0,118,12,120
+chr21	20587997	chr21:20587997:M	ACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,5:13:110,0,129	1/1:0,9:10:252,30,0	0/0:9,1:10:0,3,217
+chr21	20588087	chr21:20588087:M	TATATATATATATATATA	<16>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:9:133,133,133,26,26,0	2/2:0,0,1:1:15,15,15,3,3,0	1/1:0,3,0:4:99,6,0,100,9,103
+chr21	20588119	chr21:20588119:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,9:21:50,0,255	0/0:5,1:6:0,6,131	0/0:27,0:28:0,84,255
+chr21	20588145	chr21:20588145:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,9:22:47,0,255	0/0:6,1:7:0,9,159	0/0:32,0:32:0,96,255
+chr21	20588236	chr21:20588236:M	ATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,9:17:62,0,179	0/0:5,1:6:0,6,127	0/0:20,0:20:0,60,255
+chr21	20588446	chr21:20588446:M	TATATATACATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,6:18:20,0,255	0/0:15,1:16:0,36,255	0/0:21,0:21:0,63,255
+chr21	20588518	chr21:20588518:M	TATATATATATATATATATATA	<16>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,6:12:187,58,40,129,0,113	2/2:0,0,1:1:12,12,12,3,3,0	1/1:0,3,0:4:98,12,0,98,12,98
+chr21	20600172	chr21:20600172:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,16:24:233,0,39	1/1:0,16:17:255,49,0	0/1:9,20:29:255,0,73
+chr21	20600593	chr21:20600593:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,20:32:255,0,133	1/1:0,23:23:255,68,0	0/1:20,17:39:219,0,255
+chr21	20603452	chr21:20603452:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTCTTTTCTCTTCTTTT	<7.6>,<9.6>,<12.6>,<13.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/2:0,8,8,0,0:16:255,226,200,222,0,195,255,226,222,255,255,226,222,255,255	2/3:0,0,12,4,0:16:255,255,255,115,115,79,255,255,0,255,255,255,72,255,255	1/4:0,13,0,0,5:18:255,142,103,255,142,255,255,94,255,255,255,0,255,255,255
+chr21	20606508	chr21:20606508:M	GAGAGAGAGAGAGAGAGAGAGA	<12>	.	.	Motif=GA	GT:AD:DP:PL	0/0:35,0:37:0,106,255	0/1:11,8:20:85,0,148	0/1:19,18:37:225,0,243
+chr21	20616707	chr21:20616707:M	ATATACATATATGTATATGTATAATATGTATTTATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,1:19:0,3,255	0/1:10,5:16:182,0,227	0/1:15,4:19:127,0,255
+chr21	20633056	chr21:20633056:M	ACACACACACAAACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:44,0:44:0,122,255	0/1:24,25:49:173,0,160	0/0:28,0:28:0,78,255
+chr21	20637098	chr21:20637098:M	AATAATAATAATAATAAATAAATAAATAAATAATAAT	<14>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:24,0:25:0,75,255	0/1:8,7:15:143,0,170	0/0:17,0:18:0,54,255
+chr21	20641025	chr21:20641025:M	AAAAAAAAAAAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:58,6,0	0/1:2,1:4:31,0,45	0/1:2,4:6:95,0,42
+chr21	20656183	chr21:20656183:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:7:74,4,0	0/1:3,1:5:2,0,42	0/1:1,3:4:36,0,4
+chr21	20657799	chr21:20657799:M	ATATATATATATATATATATATATATATATAT	<14>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,4:11:95,0,45	0/1:3,2:6:42,0,40	1/1:1,5:10:110,4,0
+chr21	20660697	chr21:20660697:M	ATCAGTCAATCAATCAAT	<3.8>	.	.	Motif=ATCA	GT:AD:DP:PL	0/1:16,13:29:248,0,255	0/1:15,17:32:255,0,255	1/1:0,25:25:255,75,0
+chr21	20681652	chr21:20681652:M	TTTTTGTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:159,0,196	0/1:12,18:30:228,0,123	1/1:1,29:32:255,75,0
+chr21	20683532	chr21:20683532:M	AAAAAAAAAAAAAAAAAAAGAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:10,16,80,0,77,107	0/2:1,1,3:7:68,35,46,0,12,25	1/2:0,3,1:4:67,17,5,42,0,39
+chr21	20686872	chr21:20686872:M	ACACACACACACACACACACACACACACACACACACACACA	<22.5>,<23.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,3,0,3:8:128,56,73,101,81,128,51,0,60,87	1/2:0,1,4,0:7:133,56,42,16,0,21,133,62,38,155	1/3:0,1,0,5:8:176,148,144,148,132,147,27,0,24,23
+chr21	20694434	chr21:20694434:M	AAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:96,0,8	0/1:2,3:7:83,0,32	1/1:0,5:5:131,15,0
+chr21	20694494	chr21:20694494:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,13:34:51,0,137	0/1:16,18:34:103,0,82	0/1:13,21:34:137,0,51
+chr21	20700747	chr21:20700747:M	TATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,33:37:255,69,0	1/1:0,37:39:255,114,0	1/1:2,50:55:255,125,0
+chr21	20701603	chr21:20701603:M	CCCCCCACCCCCCCCACCCCCCCC	<27>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,3:3:80,9,0	0/1:4,2:6:33,0,82	0/1:5,2:7:32,0,107
+chr21	20701939	chr21:20701939:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:35:255,84,0	0/1:6,11:19:154,0,50	0/1:12,17:30:216,0,137
+chr21	20726922	chr21:20726922:M	AAAATAAAAAAAATA	<3.2>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:22,20:42:255,0,255	0/0:45,0:45:0,135,255	0/1:19,14:33:253,0,255
+chr21	20732932	chr21:20732932:M	AATAATAATAATAATAATAATAAT	<10>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:17,8:26:157,0,255	0/0:32,0:32:0,96,255	0/1:21,14:35:255,0,255
+chr21	20740961	chr21:20740961:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,21:42:255,0,255	1/1:0,33:33:255,97,0	0/0:36,2:40:0,80,255
+chr21	20741363	chr21:20741363:M	TGTTTGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	<7.8>,<8.8>	.	.	Motif=TGTT	GT:AD:DP:PL	1/2:0,13,21:34:255,255,255,249,0,153	1/1:0,42,0:42:255,126,0,255,124,255	2/2:0,0,31:31:255,255,255,92,92,0
+chr21	20742184	chr21:20742184:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:37:214,0,255	0/0:31,0:31:0,91,255	0/1:17,28:46:255,0,190
+chr21	20742455	chr21:20742455:M	ATATATATATTATATATATATATATATATAATATATATATATAT	<20>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:10:198,23,0	.	0/1:1,6:7:139,0,7
+chr21	20744350	chr21:20744350:M	TATATATATATTTTATATATATATATAAAGTATGTATATATA	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,11:18:123,0,57	.	0/0:9,0:9:0,26,138
+chr21	20747431	chr21:20747431:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,10:21:255,158,125,199,0,142	2/2:1,2,16:19:255,238,255,38,20,0	0/1:11,14,1:27:255,0,238,242,180,255
+chr21	20750918	chr21:20750918:M	ACACACACACACACACACACACACACACGCACACACACACACAC	<8>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,13:28:255,255,255,255,0,255	2/2:0,0,22:23:255,255,255,69,69,0	0/1:8,13,0:22:255,0,173,255,212,255
+chr21	20758029	chr21:20758029:M	ACACACACATACACACACACACACACACACACACACACACACAC	<21>,<23>,<26>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,2:7:131,145,190,55,56,41,89,136,0,133	2/2:1,0,6,0:7:86,105,176,3,18,0,106,183,21,197	1/3:1,8,0,6:17:255,149,137,255,164,255,141,0,255,255
+chr21	20758579	chr21:20758579:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:36:255,106,0	1/1:1,32:34:255,82,0	0/1:20,17:38:197,0,255
+chr21	20771559	chr21:20771559:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:18:77,0,151	0/0:23,1:25:0,56,255	0/1:15,13:29:150,0,196
+chr21	20772669	chr21:20772669:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,8,1:11:117,13,0,96,14,117	1/1:0,16,0:16:234,46,0,234,46,234	0/2:12,0,11:23:220,159,255,0,174,245
+chr21	20776876	chr21:20776876:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,14:27:255,219,180,235,0,160	2/2:1,1,26:28:255,255,255,64,64,0	0/1:11,17,0:28:255,0,236,255,195,255
+chr21	20787783	chr21:20787783:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,7:20:255,111,72,240,0,185	2/2:0,0,33:33:255,255,255,97,97,0	0/1:14,23,0:37:255,0,255,255,249,255
+chr21	20791347	chr21:20791347:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:30,16:46:175,0,255	0/0:41,0:41:0,121,255	0/1:22,32:54:255,0,255
+chr21	20793091	chr21:20793091:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,4:17:22,0,184	0/1:2,9:11:122,0,2	0/0:14,0:18:0,52,255
+chr21	20813660	chr21:20813660:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,5:39:0,24,255	0/1:28,7:36:26,0,255	0/1:16,16:34:205,0,186
+chr21	20815942	chr21:20815942:M	TGTTTTTGTTGTTGTTGTTGTTGTTTTTGTTTTTGTTTTTGTT	<6.7>	.	.	Motif=TGTTGT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,29:30:255,89,0	1/1:0,23:25:255,73,0
+chr21	20816929	chr21:20816929:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:8:120,36,31,43,0,59	2/2:0,0,2:3:82,59,51,9,9,0	1/2:1,2,2:6:50,7,20,2,0,33
+chr21	20818381	chr21:20818381:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,25:43:255,0,212	0/0:27,1:29:0,67,255	1/1:2,35:38:255,76,0
+chr21	20824260	chr21:20824260:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,57,0	1/1:0,20:24:255,63,0	0/1:17,10:29:201,0,255
+chr21	20826712	chr21:20826712:M	ATATATATATATATATATATATATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:18:255,8,0	0/1:0,0:3:1,0,12	1/1:0,5:7:161,20,0
+chr21	20833099	chr21:20833099:M	AACAACAACAACAACAACAACAACAACAACAACAACAACAA	<11.7>,<12.7>	.	.	Motif=AAC	GT:AD:DP:PL	2/2:0,1,21:22:255,255,255,65,46,0	2/2:0,1,27:28:255,255,255,82,64,0	1/2:0,13,9:22:255,144,105,241,0,180
+chr21	20837778	chr21:20837778:M	TTTTCTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,1:7:0,2,88	0/1:2,4:7:64,0,13	0/0:5,0:6:0,2,72
+chr21	20845702	chr21:20845702:M	TCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCT	<11.8>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:11,6:17:69,0,169	1/1:0,17:17:255,50,0	0/0:9,0:9:0,27,179
+chr21	20868827	chr21:20868827:M	CACACACACACACACACACAC	<9.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,17:31:233,0,176	1/1:1,41:42:255,106,0	0/0:53,1:54:0,141,255
+chr21	20872700	chr21:20872700:M	TTATTATTATTATTATTATTATTATTATTATTATTA	<14>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:13,10:24:205,0,255	0/0:7,0:7:0,21,192	1/1:0,13:13:255,39,0
+chr21	20874947	chr21:20874947:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,19:37:255,0,209	1/1:1,34:38:255,93,0	0/1:18,16:34:191,0,228
+chr21	20896785	chr21:20896785:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAGTGTGTGTGTGT	<12.5>,<14.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/3:6,1,0,9:16:95,115,255,137,255,255,0,70,92,49	2/3:0,0,3,3:10:90,100,137,35,73,64,58,66,0,58	0/1:6,4,0,0:10:72,0,130,88,142,227,89,89,176,162
+chr21	20899471	chr21:20899471:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGT	<21>,<23>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,10,0:26:255,141,220,210,0,255,255,255,255,255	1/3:0,4,0,4:8:165,111,99,172,107,204,65,0,103,94	2/2:1,0,13,0:15:205,246,255,24,42,0,246,255,45,255
+chr21	20899973	chr21:20899973:M	GTGTGTGGGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,13:29:165,0,222	0/0:35,0:35:0,103,255	1/1:0,46:46:255,136,0
+chr21	20902031	chr21:20902031:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:24:110,0,184	0/1:10,16:29:201,0,100	1/1:2,18:21:255,26,0
+chr21	20905429	chr21:20905429:M	TATATATATATATATATATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,6:17:64,0,157	0/0:2,0:2:0,6,36	1/1:0,10:10:187,30,0
+chr21	20906537	chr21:20906537:M	AAAAAAACAGAAAAAAAAAAAAAAAAAGAAAAAAA	<34>,<36>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,3:12:122,47,66,84,0,133	0/2:5,1,4:11:50,62,169,0,55,66	1/1:1,19,0:20:255,41,0,255,57,255
+chr21	20908692	chr21:20908692:M	AAAAAAAAAAAAA	<14>,<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,1,9,6:16:255,255,255,158,142,129,233,143,0,224	1/3:0,9,0,4:14:248,117,91,245,115,243,155,0,155,238	2/2:0,1,24,0:25:255,255,255,72,56,0,255,255,75,255
+chr21	20914534	chr21:20914534:M	AAAAAAAAAGAAAAAGAAAAAAAAA	<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16,0:30:215,0,177,255,255,255	0/2:16,0,15:31:255,255,255,0,255,255	1/1:0,27,0:27:255,80,0,255,80,255
+chr21	20918816	chr21:20918816:M	GAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA	<7.4>,<12.2>,<13.4>	.	.	Motif=GAAAA	GT:AD:DP:PL	2/3:0,0,6,2:8:218,218,218,54,54,34,159,159,0,150	1/2:0,9,4,0:14:255,109,79,253,0,241,255,105,253,255	3/3:0,0,0,10:10:255,255,255,255,255,255,30,30,30,0
+chr21	20926550	chr21:20926550:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,15,0:29:255,0,255,255,225,255	0/2:15,0,9:25:86,156,255,0,255,203	1/1:0,42,0:45:255,134,0,255,134,255
+chr21	20937991	chr21:20937991:M	ACACACGCACACACACACACACACACACACACGCACACAC	<17>,<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	2/3:1,0,14,13:28:255,255,255,226,245,163,205,255,0,189	1/2:0,19,8,0:28:255,141,227,255,0,255,255,141,255,255	3/3:0,0,0,23:23:255,255,255,255,255,255,69,69,68,0
+chr21	20945365	chr21:20945365:M	AATAATAATAAT	<3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:17,20:37:255,0,220	0/0:40,0:40:0,118,255	1/1:0,44:44:255,130,0
+chr21	20948462	chr21:20948462:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,11:23:236,0,208	0/0:19,0:20:0,57,255	1/1:0,26:29:255,83,0
+chr21	20955178	chr21:20955178:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,10:17:128,0,46	0/0:15,2:24:0,30,255	0/1:1,4:5:54,0,2
+chr21	20971844	chr21:20971844:M	AAAAAAAAACAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:24,11:39:208,0,255	0/0:37,0:38:0,114,255
+chr21	20972116	chr21:20972116:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,28:47:255,0,189	1/1:1,44:46:255,117,0	0/0:36,3:39:0,60,255
+chr21	20975051	chr21:20975051:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:7:0,21,125	0/1:6,5:12:60,0,67	0/0:7,0:7:0,21,122
+chr21	20975221	chr21:20975221:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:12,0,92	0/1:1,3:6:64,0,21	0/0:7,0:7:0,21,190
+chr21	20975464	chr21:20975464:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:129,15,0	1/1:0,2:3:73,9,0	.
+chr21	20976561	chr21:20976561:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,3:30:0,33,255	0/1:7,14:22:187,0,57	0/1:10,11:22:132,0,123
+chr21	20978900	chr21:20978900:M	TTTTTTTTATTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,20:27:255,0,51	0/1:12,9:22:104,0,147	0/0:22,0:23:0,67,255
+chr21	20981661	chr21:20981661:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,10,17:30:255,255,255,255,0,224	1/2:0,18,13:32:255,223,255,255,0,255	2/2:0,0,24:25:255,255,255,73,72,0
+chr21	20982238	chr21:20982238:M	TATATATATATATATATATATA	<20.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,3:7:108,36,24,73,0,64	.	1/1:0,4,0:4:119,12,0,119,12,119
+chr21	20984522	chr21:20984522:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:0,29:30:255,88,0	1/1:0,42:42:255,124,0
+chr21	20986545	chr21:20986545:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	0/1:3,3:7:31,0,32	1/1:0,0:1:11,3,0
+chr21	20992105	chr21:20992105:M	TTTAGTTTTATTTTTCTATTTTTTTTTTTTTTA	<5.3>	.	.	Motif=TTTATT	GT:AD:DP:PL	1/1:0,10:10:132,28,0	1/1:1,11:12:132,20,0	1/1:1,37:40:255,98,0
+chr21	20995361	chr21:20995361:M	CTCTCTCTCTCTCTCTTATCTTCCCTCTGTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTC	<29.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:11,7:18:42,0,95	0/1:10,3:13:2,0,92	0/0:14,3:17:0,9,144
+chr21	20995623	chr21:20995623:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:13:233,38,0	1/1:1,11:12:170,18,0	1/1:1,16:17:255,32,0
+chr21	20996106	chr21:20996106:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<20>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/4:0,7,0,0,5:12:255,141,123,255,144,255,255,144,255,255,202,0,197,202,187	1/2:0,9,13,0,0:25:255,255,255,255,0,207,255,255,254,255,255,255,255,255,255	3/4:0,0,0,7,3:10:181,203,255,202,255,255,82,85,85,63,121,198,193,0,189
+chr21	21009884	chr21:21009884:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,10,0:22:239,0,255,255,255,255	1/2:0,13,8:23:255,218,174,255,0,255	0/0:14,0,0:16:0,42,255,42,255,255
+chr21	21011155	chr21:21011155:M	TTTTTTTTTCTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,0:38:0,112,255	0/1:12,25:38:255,0,105	0/1:26,16:42:174,0,255
+chr21	21013782	chr21:21013782:M	AAAAAAAAAAAAAGAAAATAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0,0:30:0,90,255,87,255,255	0/2:7,0,11:20:255,193,255,0,190,152	0/1:8,16,0:26:255,0,167,255,214,255
+chr21	21014424	chr21:21014424:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:18:0,35,255	0/1:8,4:13:30,0,108	0/0:13,0:16:0,43,243
+chr21	21026626	chr21:21026626:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,62,0	0/1:23,13:39:130,0,255	0/1:12,11:23:120,0,137
+chr21	21026856	chr21:21026856:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:14:0,11,112	1/1:2,8:13:77,5,0	0/0:6,0:7:0,19,85
+chr21	21031810	chr21:21031810:M	ACACACACACACACACACACTCACACACAC	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	0/2:22,0,22:44:255,255,255,0,255,255	1/2:0,14,28:42:255,255,255,255,0,133	0/0:33,1,1:35:0,69,255,70,255,255
+chr21	21032929	chr21:21032929:M	TTTCTTTCTTTCTTTCTTT	<1.5>,<2.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,7,0:7:184,21,0,148,21,132	1/2:0,12,9:21:255,160,101,209,0,152	2/2:0,0,16:16:255,255,255,48,47,0
+chr21	21032945	chr21:21032945:M	TTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:9:174,128,116,58,0,127	.	1/2:0,2,3:7:124,79,67,57,0,107
+chr21	21043851	chr21:21043851:M	AAAAAAAAAAAAAAAAAGAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:164,29,0	0/1:2,10:14:135,0,3	1/1:2,18:20:255,24,0
+chr21	21044036	chr21:21044036:M	TGTGTGTGTGTGTGTG	<9>,<10>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,7:23:255,132,66,255,0,239	1/2:0,19,12:31:255,214,125,255,0,251	1/1:1,40,0:41:255,102,0,255,121,255
+chr21	21049014	chr21:21049014:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,2:11:255,36,4,163,0,132	1/1:0,10,0:11:255,30,0,203,32,185	1/2:0,5,5:11:255,97,68,88,0,57
+chr21	21049872	chr21:21049872:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,17:42:202,0,255	0/0:45,0:46:0,135,255	0/1:23,20:44:241,0,255
+chr21	21050137	chr21:21050137:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:41:224,0,255	0/0:38,2:40:0,83,255	0/1:18,16:36:181,0,226
+chr21	21051263	chr21:21051263:M	AGCTAGCTAGC	<1.8>	.	.	Motif=AGCT	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:21,21:42:255,0,255	1/1:0,52:52:255,154,0
+chr21	21052151	chr21:21052151:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,3:3:91,91,91,9,9,0	2/2:0,0,1:2:28,30,41,3,6,0	1/1:0,4,0:5:141,15,0,137,15,134
+chr21	21053945	chr21:21053945:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,58:59:255,155,0	1/1:0,43:43:255,127,0	1/1:0,48:48:255,142,0
+chr21	21056491	chr21:21056491:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<20>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,14,6,0:20:255,103,121,242,0,255,255,163,255,255	1/1:0,8,0,0:8:134,23,0,156,24,233,157,24,239,247	2/3:0,0,12,6:21:255,255,255,180,181,135,209,255,0,255
+chr21	21056528	chr21:21056528:M	GAGAGAGGGGGAGAGAGAGGAGAGAGAGAGAGAGTGAGAGAGAGAGATAGTGAGAGAGAGAGA	<30.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:2,8:10:80,2,0	1/1:0,8:8:104,22,0	0/0:9,0:9:0,25,118
+chr21	21058145	chr21:21058145:M	AAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:26:255,78,0	1/1:0,11:18:255,41,0	1/1:0,19:21:255,60,0
+chr21	21058670	chr21:21058670:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,27:30:255,52,0	0/1:13,14:31:171,0,153	1/1:4,34:39:255,35,0
+chr21	21063211	chr21:21063211:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,14:17:255,49,0	0/0:0,0:1:0,0,0
+chr21	21066418	chr21:21066418:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:20,16:36:183,0,255	0/0:33,0:34:0,100,255
+chr21	21068127	chr21:21068127:M	TTTTTTTTCTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:8:137,23,0	0/1:3,4:8:53,0,26	1/1:0,10:11:179,32,0
+chr21	21068459	chr21:21068459:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:10:147,0,27	0/1:5,7:14:155,0,94	0/0:10,0:11:0,30,255
+chr21	21070268	chr21:21070268:M	TATATATATATATATATATA	<9>,<11>	.	.	Motif=TA	GT:AD:DP:PL	0/1:6,19,1:26:255,0,47,255,78,255	1/2:0,15,7:23:255,137,189,255,0,255	0/0:31,0,0:31:0,91,255,91,255,255
+chr21	21071871	chr21:21071871:M	CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11>	.	.	Motif=CTAT	GT:AD:DP:PL	0/1:13,13:27:255,0,255	1/1:0,20:21:255,63,0	0/1:11,9:20:188,0,244
+chr21	21076117	chr21:21076117:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,7:23:134,0,255	0/1:12,9:23:175,0,255	0/0:29,0:29:0,87,255
+chr21	21080615	chr21:21080615:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:24:96,0,198	0/1:12,9:21:96,0,148	0/0:26,0:26:0,77,255
+chr21	21080657	chr21:21080657:M	AAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:143,13,0	0/1:1,2:3:45,0,17	0/0:4,0:5:0,15,149
+chr21	21081863	chr21:21081863:M	AAACAAACAAACA	<2.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:22,29:51:255,0,255	1/1:0,60:60:255,177,0	0/0:35,0:35:0,103,255
+chr21	21082226	chr21:21082226:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:13:103,0,146	1/1:0,3:4:97,12,0	0/0:17,0:20:0,59,255
+chr21	21082277	chr21:21082277:M	AAAACAAAAAAAAAAAAACAAAACAAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,4:14:227,101,90,109,0,193	2/2:0,0,12:13:255,255,255,39,36,0	1/1:2,20,0:22:255,29,0,255,65,255
+chr21	21085202	chr21:21085202:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:45:252,0,255	1/1:1,34:36:255,88,0	0/0:46,0:47:0,138,255
+chr21	21088971	chr21:21088971:M	AAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,15:26:255,0,211	1/1:0,19:21:255,62,0	0/0:37,0:38:0,114,255
+chr21	21106315	chr21:21106315:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:14:208,24,0	.	1/1:1,24:28:255,64,0
+chr21	21114827	chr21:21114827:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:40:255,117,0	1/1:2,27:30:255,52,0	1/1:1,38:40:255,100,0
+chr21	21115958	chr21:21115958:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTTTCATGCTGAGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<37.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,1:7:44,6,0	1/1:0,7:14:204,21,0	0/0:0,0:6:0,0,0
+chr21	21123400	chr21:21123400:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,25:28:255,46,0	1/1:2,27:30:255,53,0	1/1:1,40:41:255,103,0
+chr21	21125715	chr21:21125715:M	AGAGAGAGAGAGA	<10.5>,<11.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,6,21:27:255,255,205,85,0,4	1/2:0,4,10:14:255,132,91,55,0,13	2/2:0,4,19:23:255,255,199,69,12,0
+chr21	21128245	chr21:21128245:M	TTTTTTTTTTTTCTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,34:35:255,102,0	1/1:1,37:39:255,96,0
+chr21	21134065	chr21:21134065:M	TTTTTTTTTTTTTTTTT	<14>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	3/3:1,0,0,20:21:255,255,255,255,255,255,44,63,62,0	1/3:1,10,1,16:29:255,255,255,255,255,255,255,0,166,224	2/3:1,0,7,5:13:244,196,248,58,98,64,107,106,0,88
+chr21	21134711	chr21:21134711:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,32:33:255,255,255,79,97,0	1/2:0,18,10:30:255,151,93,255,0,255	2/2:1,0,19:20:255,255,255,41,59,0
+chr21	21135080	chr21:21135080:M	AAAAAAAAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,4:10:56,82,235,0,82,56	0/1:6,7,1:14:174,0,146,177,87,255	0/2:11,0,7:20:79,134,255,0,207,154
+chr21	21135246	chr21:21135246:M	AAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5,0:5:144,15,0,104,15,91	1/2:0,1,7:10:205,114,91,18,0,13	1/2:0,5,1:6:161,18,0,88,0,71
+chr21	21136465	chr21:21136465:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,71,255	0/1:12,19:33:255,0,233	0/0:15,0:18:0,44,255
+chr21	21136902	chr21:21136902:M	TTTTTTTTTTTT	<11>,<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,29,19:51:255,255,255,255,255,220,255,255,0,255	1/3:2,16,1,20:41:255,255,255,255,255,255,255,0,255,255	2/3:1,0,18,19:41:255,255,255,255,255,255,255,255,0,223
+chr21	21142366	chr21:21142366:M	TTTTTTTTTATGTTTTTTTTTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,2:6:72,17,18,26,0,46	1/2:1,6,2:9:113,17,7,66,0,83	1/2:0,5,3:8:146,51,28,71,0,62
+chr21	21143805	chr21:21143805:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,1,19:37:255,255,255,0,233,255	1/2:1,10,11:23:255,186,140,130,0,119	0/2:13,4,13:35:255,171,255,0,190,255
+chr21	21144345	chr21:21144345:M	AAAAAGAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,18:26:255,0,73	0/1:14,25:41:255,0,137	0/1:17,9:27:94,0,231
+chr21	21146547	chr21:21146547:M	ATATATATATGTATATATATATATATAT	<11>,<13>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,11:19:255,202,255,241,0,194	1/2:0,4,1:5:128,17,18,108,0,102	1/2:0,10,2:13:255,37,20,255,0,255
+chr21	21147706	chr21:21147706:M	ATATTATATACTATATATAATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,6:23:107,0,255	0/0:10,0:10:0,30,255	0/1:14,13:27:255,0,255
+chr21	21150978	chr21:21150978:M	ATATATATATAT	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,117,0	0/1:18,27:45:255,0,255	1/1:0,50:50:255,149,0
+chr21	21156569	chr21:21156569:M	ATAGATAGATTATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<13.5>,<14.5>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:8,12,0:20:160,0,87,184,143,255	0/0:29,1,0:31:0,71,255,87,255,255	1/2:0,6,6:14:236,105,72,89,0,71
+chr21	21158613	chr21:21158613:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:23:255,42,0	1/1:0,13:15:255,44,0	1/1:0,21:22:255,66,0
+chr21	21161562	chr21:21161562:M	TGTGTGTGTGTGTGTGTGTATGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,40:42:255,123,0	1/1:1,42:44:255,111,0	1/1:1,40:41:255,103,0
+chr21	21175533	chr21:21175533:M	AAAAAAAATAAAAAAAAATAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:28:0,76,255	0/0:27,0:27:0,79,255	0/1:15,14:31:157,0,175
+chr21	21198185	chr21:21198185:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,14:30:255,255,255,255,0,255	1/2:0,16,6:23:255,159,105,255,0,255	1/2:0,12,15:30:255,255,255,255,0,255
+chr21	21200410	chr21:21200410:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:17:240,22,0	0/1:5,14:20:180,0,37	1/1:3,21:25:255,20,0
+chr21	21200752	chr21:21200752:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:80,9,0	0/1:1,1:2:21,0,21	0/1:0,0:2:0,0,0
+chr21	21210968	chr21:21210968:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<20>,<21>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,24:26:255,255,255,75,64,0	1/2:0,11,10:23:255,167,100,204,0,142	2/2:0,2,18:20:255,255,255,60,24,0
+chr21	21212743	chr21:21212743:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:90,15,0	0/1:2,9:11:123,0,2	1/1:0,6:6:106,18,0
+chr21	21215733	chr21:21215733:M	AAATAAATAAATAAA	<2.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,37:37:255,109,0	1/1:0,30:30:255,88,0	1/1:0,29:29:255,86,0
+chr21	21236757	chr21:21236757:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,35:37:255,110,0	1/1:0,23:23:255,69,0	1/1:0,40:40:255,120,0
+chr21	21237950	chr21:21237950:M	TTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,17:20:255,60,0	1/1:0,23:26:255,78,0
+chr21	21251745	chr21:21251745:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,75,0	1/1:0,37:42:255,115,0	1/1:0,30:41:255,101,0
+chr21	21254899	chr21:21254899:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,25:28:255,79,0	1/1:0,23:25:255,73,0	1/1:0,32:33:255,97,0
+chr21	21254950	chr21:21254950:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,29:30:255,90,0	1/1:0,40:41:255,123,0
+chr21	21259920	chr21:21259920:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,42,0	1/1:0,16:16:255,48,0	1/1:0,18:18:255,54,0
+chr21	21260565	chr21:21260565:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,43:46:255,98,0	1/1:0,41:41:255,121,0	1/1:2,38:42:255,86,0
+chr21	21264743	chr21:21264743:M	TATATATATACATATATATATATTCCACTATATATATACATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,18:30:255,0,211	1/1:0,21:21:255,63,0	0/1:11,19:30:255,0,209
+chr21	21272498	chr21:21272498:M	GCGCGCGCGCGC	<4>,<7>	.	.	Motif=GC	GT:AD:DP:PL	1/2:0,11,6:17:255,80,111,242,0,241	1/2:0,27,13:40:255,169,238,255,0,255	1/2:1,11,5:17:255,53,98,226,0,240
+chr21	21272509	chr21:21272509:M	CACACACACACACACACACACACAC	<9.5>,<10.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,15,11:29:255,151,66,237,0,154	2/2:0,3,29:32:255,255,255,96,51,0	1/2:0,27,13:42:255,178,55,255,0,255
+chr21	21272935	chr21:21272935:M	CACACACACACACACACACACACACACACGGGACATGCATTCACACACATACACACACACACACACACACACACA	<35.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,3:3:80,9,0	0/0:0,0:1:0,0,0	1/1:0,1:1:27,3,0
+chr21	21280170	chr21:21280170:M	GTGTGTGTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,18:36:240,0,239	1/1:0,45:45:255,132,0	0/1:23,26:49:255,0,255
+chr21	21298589	chr21:21298589:M	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGATAGA	<10.5>,<11.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/2:0,8,13:23:255,226,166,140,0,79	1/1:0,20,0:21:255,60,0,255,58,255	1/2:0,13,12:28:255,206,132,225,0,151
+chr21	21301371	chr21:21301371:M	TTTTTTTTTTTCTATTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,11:18:255,0,94	1/1:0,29:30:255,90,0	0/1:13,19:35:255,0,255
+chr21	21308063	chr21:21308063:M	ACACACATACACACACACACACACGTACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,7:26:122,0,255	1/1:0,19:21:255,62,0	0/1:18,8:27:138,0,255
+chr21	21311336	chr21:21311336:M	TTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:71,0,44	1/1:0,8:10:251,29,0	0/1:1,3:4:77,0,18
+chr21	21312567	chr21:21312567:M	GAAAAAGAAAAAAAAA	<2.5>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:27,29:56:255,0,255	1/1:0,38:38:255,114,0	0/1:28,19:47:255,0,255
+chr21	21316534	chr21:21316534:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3,0:8:32,0,52,41,47,125	1/2:1,1,4:6:53,53,104,2,0,14	0/2:4,0,5:9:61,87,199,0,58,43
+chr21	21319704	chr21:21319704:M	TTATTTTTTTTTTATTTTT	<3.3>	.	.	Motif=TTATTT	GT:AD:DP:PL	1/1:1,35:36:255,85,0	1/1:1,48:50:255,125,0	1/1:0,33:33:255,99,0
+chr21	21327307	chr21:21327307:M	AAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:6:19,0,29	0/1:2,4:6:47,0,15	1/1:0,1:1:17,3,0
+chr21	21331518	chr21:21331518:M	TATATATATATATATATACTCTATATACATATATATATATACTCTATATACATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:6:54,13,0	1/1:0,3:3:32,8,0	1/1:0,4:5:43,11,0
+chr21	21331579	chr21:21331579:M	AGAGAGAGAGAGAGAGAGAGAGAGTGAGAGAGAGA	<20.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,2:2:53,6,0	0/0:1,0:2:0,3,28	1/1:0,3:6:118,17,0
+chr21	21331901	chr21:21331901:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:11,12:23:164,0,145	1/1:0,24:24:255,71,0	0/1:15,16:31:210,0,191
+chr21	21341709	chr21:21341709:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:0,29:30:255,85,0	1/1:1,19:21:255,33,0
+chr21	21343353	chr21:21343353:M	ACACATACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,7:15:255,121,160,203,0,186	2/2:0,0,14:15:234,255,255,41,41,0	1/2:0,11,13:24:255,221,255,255,0,251
+chr21	21346209	chr21:21346209:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:34:216,0,189	0/1:14,4:21:8,0,209	0/1:20,9:29:73,0,255
+chr21	21351118	chr21:21351118:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:87,9,0	1/1:0,5:7:168,21,0	1/1:0,3:4:97,12,0
+chr21	21352827	chr21:21352827:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,1,15:26:214,218,255,0,165,109	1/2:2,22,13:38:255,158,141,255,0,255	0/2:9,1,11:22:152,151,255,0,156,113
+chr21	21356988	chr21:21356988:M	AATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<10.8>,<11.8>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,9,10:19:255,191,139,149,0,119	1/1:0,14,0:14:255,41,0,255,41,255	1/2:0,3,4:7:153,74,55,48,0,36
+chr21	21365239	chr21:21365239:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<14>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,32,0:34:255,102,0,255,100,255	1/2:0,8,9:17:255,157,107,140,0,90	1/1:0,19,0:19:255,57,0,255,56,255
+chr21	21378176	chr21:21378176:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:0,39:39:255,115,0	1/1:0,47:50:255,146,0
+chr21	21385372	chr21:21385372:M	ACACACACACACACACACACACACACACGCACACACACATACACACACACA	<29.5>,<30.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:4,0,4:10:99,80,183,0,113,99	1/2:0,6,5:12:255,86,52,112,0,80	0/2:8,0,4:12:81,70,255,0,211,199
+chr21	21387177	chr21:21387177:M	CACACACACATACACACACACACACACACACACACACACACACACACA	<23>,<25>,<27>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,10,0,4:14:255,109,80,255,108,255,179,0,255,255	2/3:1,0,6,9:17:255,255,255,236,251,222,87,162,0,143	1/3:0,11,0,0:17:205,43,11,236,44,255,193,0,255,255
+chr21	21400598	chr21:21400598:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,6:19:52,0,171	0/0:20,1:23:0,47,255	0/1:13,8:21:79,0,168
+chr21	21411006	chr21:21411006:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:12:0,9,255	0/1:9,5:15:101,0,187	0/0:16,2:19:0,0,255
+chr21	21411220	chr21:21411220:M	ATATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:28,11:39:20,0,255	0/0:29,0:29:0,87,255	0/0:29,5:34:0,40,255
+chr21	21414474	chr21:21414474:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,9:18:110,0,109	0/0:13,0:14:0,41,233	1/1:2,14:17:225,14,0
+chr21	21414950	chr21:21414950:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,14:33:173,0,239	1/1:1,36:38:255,93,0	0/1:11,20:33:255,0,104
+chr21	21416495	chr21:21416495:M	AAAAAAAAAAAGAAAAGAAAAAAGAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,11:25:224,0,255	1/1:0,35:37:255,110,0	0/1:21,9:31:163,0,255
+chr21	21419306	chr21:21419306:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,6:10:142,0,58	1/1:0,11:14:255,41,0	0/1:3,5:10:119,0,57
+chr21	21431047	chr21:21431047:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,52	1/1:0,0:2:2,1,0	0/1:1,3:4:39,0,5
+chr21	21431124	chr21:21431124:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,17:36:177,0,208	1/1:0,12:16:191,35,0	0/1:18,18:36:189,0,187
+chr21	21431321	chr21:21431321:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:33:205,0,223	1/1:0,36:37:255,108,0	0/1:16,23:39:255,0,179
+chr21	21436760	chr21:21436760:M	TTTTTTTTTCTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6,1:17:63,0,146,93,140,255	1/2:0,10,21:34:255,255,255,171,0,183	0/1:21,24,0:45:255,0,251,255,255,255
+chr21	21436929	chr21:21436929:M	TTTTTTTTTTTATTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:12,17:29:219,0,130	0/0:34,1:35:0,85,255
+chr21	21437475	chr21:21437475:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,0,4:22:65,116,255,0,255,255	1/2:0,12,6:18:255,156,120,255,0,255	0/2:14,0,4:20:72,116,255,0,255,255
+chr21	21437909	chr21:21437909:M	ATATTATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:44,0:44:0,132,255	0/1:24,10:34:207,0,255	0/0:43,0:43:0,129,255
+chr21	21439123	chr21:21439123:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:29:0,87,255	0/1:14,9:24:174,0,255	0/0:29,0:33:0,95,255
+chr21	21440690	chr21:21440690:M	AAAAAAAAGAAAAGAAAAGAAAAGAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:255,0,255	0/1:17,14:31:255,0,255	0/1:15,19:34:255,0,255
+chr21	21443425	chr21:21443425:M	TTTTTTTTTTCTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:31:242,0,149	0/1:17,16:33:183,0,201	0/1:21,25:46:255,0,244
+chr21	21450290	chr21:21450290:M	GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:25,0:26:0,75,255	0/1:21,20:43:255,0,255
+chr21	21450772	chr21:21450772:M	ATGTATGTATGTATGTATGTAT	<8>	.	.	Motif=ATGT	GT:AD:DP:PL	0/0:15,2:17:0,2,255	0/1:11,5:17:70,0,234	0/0:11,1:12:0,12,246
+chr21	21450794	chr21:21450794:M	ACACACACACACACACACACACACACACACACACACACACA	<11.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,13:26:255,255,255,255,0,255	0/1:0,23,0:30:255,0,10,255,79,255	1/2:0,13,9:22:255,252,213,255,0,255
+chr21	21450959	chr21:21450959:M	ATATATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:23,20:43:255,0,255	0/1:17,30:48:255,0,166	0/1:17,22:39:255,0,204
+chr21	21452169	chr21:21452169:M	CACACACACACACACACACACACACACA	<12>,<13>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,24,18:42:255,255,215,255,0,255	0/1:11,9,0:23:217,0,253,173,192,255	1/2:1,14,11:26:255,153,137,235,0,181
+chr21	21452572	chr21:21452572:M	TATTGTATATATATTGTATTGT	<2.2>	.	.	Motif=TATTG	GT:AD:DP:PL	1/1:0,4:4:111,12,0	.	.
+chr21	21455211	chr21:21455211:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,5:15:248,125,99,144,0,193	0/1:8,6,0:17:76,0,92,118,130,255	1/1:1,12,1:16:204,26,0,216,18,255
+chr21	21460933	chr21:21460933:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,21:42:255,0,255	1/1:1,37:39:255,96,0	0/1:19,15:34:176,0,249
+chr21	21472968	chr21:21472968:M	ACACACACACACACACACACACACACGCACACATACACACACACACAC	<25>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,13:23:169,0,105	0/0:23,1:24:0,53,255	0/1:14,13:30:146,0,183
+chr21	21473301	chr21:21473301:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,10:25:121,0,215	0/0:26,0:26:0,77,255	0/1:16,9:25:96,0,228
+chr21	21473345	chr21:21473345:M	TATATATAATATACAAAATATATGTATAAATATATATATATATATATATTATATATA	<31.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,7:16:179,0,201	0/0:2,0:2:0,6,58	0/1:0,2:4:46,0,13
+chr21	21473904	chr21:21473904:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:24:109,0,181	1/1:1,13:16:205,19,0	0/1:16,7:24:55,0,215
+chr21	21474979	chr21:21474979:M	TATATATATAACACATATATAATACATTATAATACATATATATAATACACATATATAATGCACATATATATATATATA	<38>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,4:5:61,0,4	0/0:8,0:8:0,24,143	0/1:7,2:9:11,0,103
+chr21	21480367	chr21:21480367:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:7:58,0,14	0/0:4,0:4:0,12,66	1/1:0,4:4:68,12,0
+chr21	21488276	chr21:21488276:M	ATTATAATTAATTATAAT	<3.2>	.	.	Motif=ATTATA	GT:AD:DP:PL	1/1:0,44:44:255,132,0	1/1:0,26:26:255,78,0	1/1:0,45:45:255,135,0
+chr21	21495993	chr21:21495993:M	TATATATATATGAAATATATATATAATATATAAAATATATATAT	<24>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,10:15:196,0,76	1/1:0,5:5:117,15,0	0/1:5,3:10:48,0,96
+chr21	21500528	chr21:21500528:M	ATTTTCATTTTCCTTTT	<2.7>	.	.	Motif=ATTTTC	GT:AD:DP:PL	0/1:26,15:41:255,0,255	0/0:48,0:48:0,144,255	0/1:22,22:44:255,0,255
+chr21	21501618	chr21:21501618:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,0,8:28:65,145,255,0,255,255	0/1:13,16,0:29:195,0,142,255,190,255	1/2:5,29,17:51:255,224,255,255,0,255
+chr21	21507789	chr21:21507789:M	AAAAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,1,2:6:32,8,69,0,6,21	0/1:5,7,0:15:187,0,116,200,93,255	0/2:5,0,6:13:70,103,255,0,94,62
+chr21	21508809	chr21:21508809:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,8:9:241,27,0	.
+chr21	21514466	chr21:21514466:M	AAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,68,0	1/1:0,26:26:255,78,0	1/1:0,7:9:190,11,0
+chr21	21522244	chr21:21522244:M	ATATATATGAATACTATATTTATATATAAATATGATTATATAT	<19.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,11:11:255,33,0	1/1:0,2:2:73,6,0	0/1:6,5:11:152,0,126
+chr21	21522613	chr21:21522613:M	TTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<39>,<40>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:57,41,36,6,6,0	1/2:0,3,5:10:228,102,78,51,0,22	0/2:4,0,1:6:10,17,127,0,112,109
+chr21	21524424	chr21:21524424:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:29:0,81,255	0/1:10,17:30:255,0,213	0/0:27,0:28:0,81,255
+chr21	21527114	chr21:21527114:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,3:24:0,14,255	0/1:17,8:26:74,0,221	0/0:25,0:26:0,67,255
+chr21	21531827	chr21:21531827:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:14:0,40,235	0/1:7,4:12:34,0,93	0/0:28,1:31:0,73,255
+chr21	21533649	chr21:21533649:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:31:0,69,255	0/1:13,7:21:61,0,174	0/1:12,10:25:107,0,172
+chr21	21536394	chr21:21536394:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:15,9:25:95,0,189	0/1:10,12:24:166,0,111
+chr21	21540255	chr21:21540255:M	ATATATATATACACATATATATATATACACATATATATACATATATATATAT	<25>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,0:15:0,44,255	0/1:6,3:9:28,0,81	0/1:12,7:19:76,0,168
+chr21	21546804	chr21:21546804:M	TATATATATGTATATAAAAACATGTATGTATATATATGTATATACATACATGTTTATATATATACATATATATA	<23>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,2:7:35,0,121	0/1:1,3:6:66,0,39	0/1:10,4:14:72,0,240
+chr21	21548032	chr21:21548032:M	TGGTGGTGGTGGTGGTGGTGGT	<6.3>	.	.	Motif=TGG	GT:AD:DP:PL	0/0:20,0:22:0,64,255	0/1:11,14:29:202,0,120	0/0:22,0:24:0,70,255
+chr21	21548052	chr21:21548052:M	GTTTTTTTGTTTGTTTGTTTGTT	<7.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:11,9:21:209,0,236	0/0:29,0:29:0,87,255
+chr21	21551647	chr21:21551647:M	ACACACCCACACCACACACACACACACACACACACACACACACA	<19>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/2:16,0,9:26:93,166,255,0,255,221	0/1:7,12,0:21:255,0,157,255,130,255	0/2:17,0,12:29:131,215,255,0,255,220
+chr21	21556370	chr21:21556370:M	TTTTTTTTTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,11:25:135,0,164	0/1:8,17:26:218,0,72	1/1:2,27:30:255,52,0
+chr21	21562032	chr21:21562032:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:16,0:21:0,47,255	0/1:4,9:14:111,0,28	0/0:18,0:18:0,53,255
+chr21	21568386	chr21:21568386:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:32,0,120	0/0:11,0:12:0,32,183	0/0:14,1:16:0,26,223
+chr21	21569748	chr21:21569748:M	CACACACACACACAAGGAACACACACATACACGCACACACACA	<22.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/0:15,0:16:0,47,255	0/1:14,13:27:162,0,182
+chr21	21573511	chr21:21573511:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,1:42:0,95,255	0/1:8,11:20:138,0,84	0/0:23,0:23:0,68,255
+chr21	21574435	chr21:21574435:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/1:23,22:46:255,0,255	0/0:42,0:42:0,124,255
+chr21	21576758	chr21:21576758:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:5:101,60,48,14,0,2	1/2:1,6,3:11:148,42,28,64,0,78	1/2:0,2,3:5:102,49,35,27,0,18
+chr21	21577180	chr21:21577180:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:11,8:20:93,0,132	0/0:17,1:19:0,38,255
+chr21	21578022	chr21:21578022:M	ACACACACACACACACACACACACACACAC	<16>	.	.	Motif=AC	GT:AD:DP:PL	0/0:29,0:31:0,90,255	0/1:19,11:32:108,0,249	0/0:34,0:36:0,105,255
+chr21	21579437	chr21:21579437:M	ATATATATATATACATATA	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/1:15,6:22:114,0,255	0/0:33,0:33:0,99,255
+chr21	21581115	chr21:21581115:M	TTTTTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,12:16:221,255,255,29,47,0	1/2:0,17,5:26:255,80,69,255,0,255	2/2:0,1,12:16:232,239,255,43,17,0
+chr21	21592329	chr21:21592329:M	AAAAAAAAAACAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,106,255	0/1:22,17:39:196,0,255	0/0:42,0:43:0,127,255
+chr21	21599770	chr21:21599770:M	AAAACAAAACAAAAAAAAAC	<4.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:31,0:31:0,93,255	0/0:36,0:36:0,108,255	0/1:25,16:41:255,0,255
+chr21	21603052	chr21:21603052:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,31:32:255,96,0	1/1:0,23:25:255,74,0
+chr21	21603633	chr21:21603633:M	AAAAAAAAAATAGAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:38:255,112,0	0/1:20,24:44:255,0,227	0/1:23,22:45:255,0,255
+chr21	21616069	chr21:21616069:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:40:238,0,255	0/0:36,0:38:0,111,255	0/1:23,16:39:177,0,255
+chr21	21636654	chr21:21636654:M	ATTTATTTATTTATTTA	<5.2>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:27,22:49:255,0,255	0/1:19,15:34:182,0,255
+chr21	21639473	chr21:21639473:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:15,11:29:120,0,200	0/1:14,19:33:249,0,157
+chr21	21642019	chr21:21642019:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,111,255	0/1:11,8:20:148,0,245	0/1:10,5:18:86,0,222
+chr21	21658675	chr21:21658675:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:25:255,69,0	1/1:2,19:23:255,7,0	1/1:1,15:19:255,19,0
+chr21	21678015	chr21:21678015:M	TTTTTTTTTTTTTGTTTTTTTTGTTTTTTTTTTTTTT	<21>,<39>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:5:120,125,138,12,15,0	1/1:0,15,0:16:255,33,0,255,33,255	1/1:0,15,1:16:255,44,0,255,17,255
+chr21	21680621	chr21:21680621:M	TTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:12,3,0	1/1:0,11:12:255,36,0	1/1:0,13:15:255,45,0
+chr21	21689957	chr21:21689957:M	TATTATTATTTTATTA	<5.7>	.	.	Motif=TAT	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,43:43:255,129,0	1/1:0,38:38:255,114,0
+chr21	21691734	chr21:21691734:M	TTTTTTTTTTTTTT	<13>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45,0:47:255,138,0,255,141,255	1/2:1,24,7:34:255,182,129,255,0,255	1/2:1,22,15:40:255,255,255,255,0,255
+chr21	21692585	chr21:21692585:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,38:40:255,81,0	1/1:1,22:23:255,50,0	1/1:1,30:34:255,61,0
+chr21	21698212	chr21:21698212:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,20:23:249,22,0	1/1:1,11:14:124,7,0	1/1:2,12:14:145,11,0
+chr21	21703021	chr21:21703021:M	ATCATCATCATCATCATCA	<5.3>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:0,25:25:255,74,0	1/1:0,43:43:255,127,0
+chr21	21704904	chr21:21704904:M	TTTTCTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,48,0	0/1:5,9:15:222,0,109	0/1:4,15:23:255,0,69
+chr21	21712686	chr21:21712686:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:14,17:31:212,0,158	0/1:15,23:40:255,0,167
+chr21	21717302	chr21:21717302:M	TATACTATACT	<1.2>	.	.	Motif=TATAC	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:24,11:35:97,0,255	0/1:20,19:39:247,0,255
+chr21	21718440	chr21:21718440:M	AGTATAGTATACCATAGTATGTAT	<5>	.	.	Motif=AGTAT	GT:AD:DP:PL	1/1:0,24:24:255,66,0	1/1:0,32:32:255,89,0	1/1:0,32:32:255,89,0
+chr21	21720243	chr21:21720243:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTTCCT	<16.2>,<18.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,11,0:11:255,33,0,255,33,255	1/1:0,14,0:15:255,45,0,255,45,255	1/2:0,5,3:8:210,78,62,130,0,121
+chr21	21722379	chr21:21722379:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,1:19:0,29,255	0/1:13,13:26:255,0,255	0/1:6,10:17:230,0,114
+chr21	21725339	chr21:21725339:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,30	1/1:0,0:2:27,6,0	0/1:1,3:4:82,0,18
+chr21	21742413	chr21:21742413:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:10:203,2,0	0/1:1,1:2:22,0,21	0/1:7,1:9:3,0,164
+chr21	21755217	chr21:21755217:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:14,18:32:228,0,156	0/1:15,13:29:165,0,192
+chr21	21755677	chr21:21755677:M	TTTTTTTTTTTGTTTGTTTTGTTTTGTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:41:0,67,255	0/1:13,8:25:99,0,198	0/1:17,19:43:255,0,242
+chr21	21757626	chr21:21757626:M	AAAAAAAAAAAAAGAAAAAAAGAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:14,9:24:94,0,174	0/1:4,16:20:227,0,13
+chr21	21762446	chr21:21762446:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<6>,<10>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,37,0:37:255,111,0,255,111,255	1/2:0,16,15:31:255,255,255,255,0,255	1/2:0,22,9:32:255,176,185,255,0,255
+chr21	21780037	chr21:21780037:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGT	<20>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,6,0:16:127,0,228,156,168,255	1/2:1,9,8:18:255,119,192,219,0,210	0/2:5,0,7:12:89,123,255,0,88,53
+chr21	21790945	chr21:21790945:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,1,3:7:32,34,98,0,27,42	1/2:2,2,2:8:38,5,37,23,0,63	0/1:2,7,0:10:103,0,5,127,29,210
+chr21	21793477	chr21:21793477:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,1:37:0,89,255	0/1:14,26:44:255,0,139	0/1:14,17:33:213,0,185
+chr21	21809024	chr21:21809024:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:14:255,42,0	1/1:0,10:12:255,35,0	1/1:0,13:13:255,39,0
+chr21	21816049	chr21:21816049:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,22,9:31:255,236,174,255,0,255	0/2:14,1,9:25:185,218,255,0,227,255	0/1:12,20,0:34:255,0,118,255,215,255
+chr21	21831461	chr21:21831461:M	TATATATATATATATATATATATATATATATATATATATATA	<8>,<10>,<14>	.	.	Motif=TA	GT:AD:DP:PL	1/3:0,9,2,10:28:255,255,255,255,255,255,255,0,188,255	1/2:0,10,7,0:18:255,150,101,228,0,174,255,150,228,255	3/3:1,0,0,7:13:255,255,255,255,255,255,2,32,29,0
+chr21	21831902	chr21:21831902:M	ACACACACACACACACACACACACACACACA	<12.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,17:35:255,255,255,255,0,255	0/1:10,8,0:19:194,0,240,219,174,255	0/2:13,0,18:31:236,255,255,0,235,145
+chr21	21849015	chr21:21849015:M	TGTGTGTGTTTATGTGTGTATGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<25.5>,<28.5>,<31.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,5,0:12:255,92,120,184,0,169,255,141,184,255	2/3:1,0,7,1:10:106,133,248,10,38,13,102,209,0,202	1/3:0,9,0,4:13:255,108,83,255,110,255,255,0,255,246
+chr21	21853576	chr21:21853576:M	ACACACACACACACATACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,11:29:49,0,130	0/0:32,0:35:0,95,255	0/1:14,9:30:23,0,159
+chr21	21861251	chr21:21861251:M	ACACACACACACACACAC	<8>,<10>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,14:32:255,255,255,255,0,255	0/2:23,0,16:39:178,255,255,0,255,255	0/1:14,23,0:37:255,0,156,255,226,255
+chr21	21863873	chr21:21863873:M	ACAACAACAACAACAACAACAACAACAACAACAACAACAA	<10>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:9,18:27:255,0,172	0/0:23,0:23:0,69,255	0/1:9,10:20:218,0,203
+chr21	21869562	chr21:21869562:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,18:35:232,0,214	0/0:35,0:37:0,108,255	0/1:6,15:21:210,0,47
+chr21	21870371	chr21:21870371:M	TTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,4,1:7:50,0,19,38,3,140	1/1:0,16,0:18:255,52,0,255,54,255	1/2:0,9,6:18:255,180,179,158,0,255
+chr21	21871318	chr21:21871318:M	ATTATTATTATTATTATTATTATTATTATT	<11>,<12>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,9,0:23:106,0,202,148,255,255	0/2:8,0,2:10:28,35,151,0,142,203	1/2:0,10,11:21:255,202,144,159,0,126
+chr21	21878669	chr21:21878669:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:16,17:33:205,0,186	0/1:17,19:36:243,0,204
+chr21	21886166	chr21:21886166:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:37:0,91,255	0/1:10,12:26:138,0,100	0/0:25,0:33:0,66,255
+chr21	21890012	chr21:21890012:M	TTTTGTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:150,0,185	0/1:16,22:38:255,0,160	0/0:38,0:39:0,114,255
+chr21	21891325	chr21:21891325:M	TTTTTTTTGTTTGTTTGTTTTGTTTTTTGTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,16:30:221,0,181	0/1:11,13:25:163,0,133	0/0:34,0:34:0,100,255
+chr21	21895791	chr21:21895791:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:11:136,0,80	1/1:0,2:6:56,7,0	0/1:5,1:7:16,0,120
+chr21	21900123	chr21:21900123:M	AAAGAAAAAAAAAAAAAGAAAGAAAGAAAG	<6.5>,<7.8>	.	.	Motif=AAAG	GT:AD:DP:PL	2/2:0,0,19:20:247,255,255,55,60,0	2/2:1,0,21:22:248,255,255,48,65,0	1/2:0,13,9:22:255,110,175,234,0,255
+chr21	21900498	chr21:21900498:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:9:116,8,0	0/1:3,3:8:43,0,30	1/1:0,1:1:17,3,0
+chr21	21909098	chr21:21909098:M	ACACACACACACACACACACACAC	<11>,<14>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,34:34:255,255,255,102,102,0	2/2:0,0,28:30:255,255,255,84,90,0	1/2:0,18,12:30:255,255,255,255,0,255
+chr21	21911154	chr21:21911154:M	AAAAAAAAAAAAAAAAAGAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,46,0	1/1:1,11:13:156,13,0	0/1:2,6:8:77,0,10
+chr21	21911395	chr21:21911395:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/0:42,3:45:0,80,255	0/1:14,21:37:255,0,160
+chr21	21912501	chr21:21912501:M	CACACACACACACACACACACACACACACACACACACACACACA	<17>,<23>	.	.	Motif=CA	GT:AD:DP:PL	0/2:16,0,13:30:141,227,255,0,255,205	0/0:15,0,0:18:0,53,255,52,255,255	1/2:2,11,5:21:255,51,110,255,0,255
+chr21	21913199	chr21:21913199:M	TTTTCTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:36:0,105,255	0/0:33,0:37:0,99,255	0/1:22,20:42:255,0,255
+chr21	21913905	chr21:21913905:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:7:87,3,0	0/1:2,6:8:77,0,10	1/1:0,6:7:113,20,0
+chr21	21921722	chr21:21921722:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,38:38:255,112,0	1/1:1,54:55:255,144,0
+chr21	21928854	chr21:21928854:M	ACACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:13:0,38,243	0/0:10,0:10:0,29,177	0/1:16,9:25:91,0,219
+chr21	21930841	chr21:21930841:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,27:28:255,81,0	0/1:9,4:18:64,0,215
+chr21	21931300	chr21:21931300:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,4:4:70,70,70,12,12,0	1/2:1,3,6:10:139,67,82,33,0,21	1/2:0,1,2:3:54,29,26,17,0,8
+chr21	21931502	chr21:21931502:M	ATATATATTATATATAATAATGTAACATATATTATATAGTATATATATATATA	<28.5>,<29.5>,<31.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:0,0,7,5:14:255,239,216,127,125,93,157,87,0,124	2/2:0,0,5,0:5:141,75,60,15,14,0,124,74,15,115	1/1:0,8,0,0:8:186,24,0,119,22,98,201,24,121,228
+chr21	21931554	chr21:21931554:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	<11>,<13>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,17,19:44:255,239,255,255,0,255	2/2:0,0,18:20:236,255,255,55,54,0	0/1:8,8,2:20:196,0,184,174,72,228
+chr21	21944388	chr21:21944388:M	TTTTTCTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,8:20:93,99,255,0,173,134	0/0:9,1,0:11:0,5,244,20,163,151	1/2:0,10,4:14:255,58,27,169,0,130
+chr21	21947321	chr21:21947321:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:31:255,90,0	1/1:0,35:37:255,108,0	1/1:0,34:35:255,103,0
+chr21	21957321	chr21:21957321:M	ATATATATACATATATATATATATATATAT	<16>	.	.	Motif=AT	GT:AD:DP:PL	0/0:23,1:24:0,52,255	0/1:4,7:11:93,0,39	0/1:10,12:23:154,0,126
+chr21	21959696	chr21:21959696:M	AATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,40:40:255,118,0	1/1:0,34:34:255,100,0
+chr21	21963149	chr21:21963149:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:19:255,56,0	1/1:1,27:29:255,65,0	1/1:2,24:27:255,44,0
+chr21	21970357	chr21:21970357:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,23:25:255,72,0	1/1:1,31:33:255,78,0
+chr21	21972019	chr21:21972019:M	TTTTTTTTTTGTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30,0:32:255,96,0,255,94,255	1/1:0,29,1:31:255,90,0,255,73,255	1/2:1,15,14:31:255,193,170,253,0,186
+chr21	21980902	chr21:21980902:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:6:65,0,0	0/1:1,3:5:47,0,3	1/1:0,4:6:97,17,0
+chr21	21986197	chr21:21986197:M	TCTTTCTTTCTTTCTTTCTTCTTT	<7>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:12,7:20:70,0,176	0/0:22,0:22:0,64,255	0/1:12,9:22:96,0,167
+chr21	21986218	chr21:21986218:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:15:0,0,134	0/0:12,0:13:0,35,201	0/1:5,8:14:99,0,48
+chr21	21986630	chr21:21986630:M	TATATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,4:8:56,0,10	0/1:0,1:2:10,0,7	0/0:0,0:2:0,1,2
+chr21	21987890	chr21:21987890:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/0:33,0:34:0,102,255	0/1:15,18:34:255,0,255
+chr21	21994807	chr21:21994807:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>	.	.	Motif=TG	GT:AD:DP:PL	0/0:13,1:15:0,16,205	0/1:6,8:14:95,0,61	0/1:5,11:16:146,0,40
+chr21	21997415	chr21:21997415:M	CTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCT	<22>	.	.	Motif=CT	GT:AD:DP:PL	0/1:12,10:22:123,0,160	1/1:2,19:22:255,27,0	0/0:21,1:22:0,47,255
+chr21	21998954	chr21:21998954:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8,1:20:183,0,234,201,158,255	1/1:1,17,0:22:255,34,0,255,54,255	0/2:14,0,7:26:48,109,255,0,243,225
+chr21	22018550	chr21:22018550:M	GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,10:21:121,0,122	0/1:13,5:19:34,0,172	1/1:1,17:18:255,35,0
+chr21	22019648	chr21:22019648:M	TATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,30:38:255,93,0	1/1:1,19:23:255,40,0	1/1:1,23:25:255,47,0
+chr21	22019664	chr21:22019664:M	TGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:2,36:43:255,65,0	1/1:0,18:18:255,54,0	1/1:0,23:26:255,69,0
+chr21	22027397	chr21:22027397:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:255,38,0	1/1:0,17:18:255,51,0	1/1:0,20:20:255,60,0
+chr21	22027975	chr21:22027975:M	AAAAAAAAAAAAAAAAGAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:22:255,60,0	1/1:1,25:30:255,53,0	1/1:2,27:34:255,31,0
+chr21	22028158	chr21:22028158:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:2,36:40:255,81,0	1/1:0,36:36:255,106,0
+chr21	22037072	chr21:22037072:M	ATTTTTATTTTTATTTTTATTT	<4.7>	.	.	Motif=ATTTTT	GT:AD:DP:PL	1/1:0,29:34:255,61,0	1/1:0,29:33:255,61,0	1/1:0,28:32:255,51,0
+chr21	22038801	chr21:22038801:M	TTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:188,21,0	1/1:0,4:6:147,18,0	1/1:0,5:9:199,26,0
+chr21	22079649	chr21:22079649:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:14,13:29:149,0,167	0/0:34,0:34:0,100,255
+chr21	22085803	chr21:22085803:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,47:49:255,126,0	1/1:0,41:41:255,120,0	1/1:2,45:47:255,102,0
+chr21	22095972	chr21:22095972:M	TTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,16,0:22:255,0,26,207,82,255	1/2:0,5,3:10:228,39,10,82,0,59	1/2:0,13,7:25:255,91,37,166,0,129
+chr21	22107048	chr21:22107048:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,104,0	0/1:20,15:35:168,0,255	1/1:0,44:44:255,130,0
+chr21	22110951	chr21:22110951:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,10:13:173,35,0	.
+chr21	22113151	chr21:22113151:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,62,0	0/1:4,11:15:145,0,25	0/1:10,7:18:82,0,125
+chr21	22115310	chr21:22115310:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:63,11,0	1/1:0,2:2:34,6,0	0/1:3,4:9:57,0,29
+chr21	22133073	chr21:22133073:M	GGGGGGGGGGG	<12>,<13>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,6,0:6:105,18,0,105,18,105	1/2:0,8,3:11:187,50,18,110,0,101	0/1:12,3,0:16:5,0,172,44,214,255
+chr21	22137207	chr21:22137207:M	AAATATAATATATATAAATATAAAT	<4.5>	.	.	Motif=AAATAT	GT:AD:DP:PL	0/1:12,15:27:255,0,237	0/1:18,9:27:154,0,255	0/0:43,0:43:0,129,255
+chr21	22137249	chr21:22137249:M	AAAACAAAAACAAA	<2.5>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,40:40:255,120,0	1/1:0,43:43:255,129,0
+chr21	22156912	chr21:22156912:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17,1:33:217,0,190,255,216,255	0/2:13,1,11:27:127,172,255,0,164,163	0/1:11,26,1:40:255,0,92,255,150,255
+chr21	22165708	chr21:22165708:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:255,199,173,30,29,0	1/2:2,13,8:23:255,97,65,145,0,170	2/2:0,0,5:6:151,109,95,18,17,0
+chr21	22169136	chr21:22169136:M	AAAAAAAAAAAAAAAAAAAAAAA	<18>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,3:4:52,60,92,9,10,0	1/2:0,3,3:7:134,48,68,94,0,85	0/0:9,0,0:12:0,30,255,20,178,148
+chr21	22173482	chr21:22173482:M	ATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,37:39:255,114,0	1/1:2,38:40:255,82,0	0/1:18,24:44:255,0,199
+chr21	22181778	chr21:22181778:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:217,0,180	0/0:27,2:30:0,44,255	0/1:18,15:35:175,0,230
+chr21	22187839	chr21:22187839:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:138,0,160	0/0:19,0:19:0,56,255	0/1:18,9:28:84,0,255
+chr21	22190801	chr21:22190801:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:13:195,21,0	1/1:1,8:9:118,9,0	1/1:0,16:16:255,47,0
+chr21	22227390	chr21:22227390:M	TTTTTTATTTTTTTTTGTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:27:0,61,255	0/0:43,0:44:0,129,255	0/1:21,17:38:205,0,255
+chr21	22232657	chr21:22232657:M	GGAAGGAAGGGAGGAAGGAAGGAAGGAAAAGAAGGAAGGAAGAAAGGAAGGAAAAAAGGAAGGAGGGAGGGAGGGAAGGAA	<33.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,9:9:106,25,0	1/1:0,3:3:35,8,0	1/1:0,2:3:23,5,0
+chr21	22237285	chr21:22237285:M	TCTCTCTCTCTCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:14,11:30:126,0,214	0/1:4,1:8:1,0,73	0/0:23,0:25:0,71,255
+chr21	22237303	chr21:22237303:M	TATATATATATATATTACATATATATATATATATATA	<20.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,18:23:255,32,0	1/1:0,0:1:0,0,0	0/1:12,8:22:138,0,238
+chr21	22237532	chr21:22237532:M	ACACACACACACACATACATATACACACACACACACACACACACACACACACACACA	<23.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:17,0,0:19:0,57,255,57,255,255	0/1:7,7,0:14:168,0,162,189,183,255	0/2:7,0,5:12:106,127,255,0,182,167
+chr21	22238420	chr21:22238420:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,11:13:255,36,0	0/0:1,0:3:0,8,51
+chr21	22258321	chr21:22258321:M	TAGATGATAGCTAGCTAGCTAGCTAGATAGATAGATAGATAGATA	<10.2>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,20:20:255,59,0	1/1:0,6:6:112,18,0
+chr21	22262706	chr21:22262706:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,43:47:255,127,0	0/1:20,17:37:183,0,234	0/1:18,23:41:255,0,197
+chr21	22265996	chr21:22265996:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	1/1:1,12:13:187,21,0	1/1:0,15:15:255,44,0
+chr21	22269977	chr21:22269977:M	TATATATATATATATA	<9>,<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/3:1,13,1,17:32:255,255,255,255,255,255,230,0,239,255	1/2:0,10,7,0:17:255,126,77,152,0,131,255,107,179,255	3/3:0,0,2,15:23:255,255,255,255,255,255,56,50,18,0
+chr21	22271183	chr21:22271183:M	TTTTCTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:7,0:7:0,21,135	0/0:3,0:4:0,11,64	0/1:4,6:11:83,0,45
+chr21	22271870	chr21:22271870:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,20:48:243,0,255	0/1:21,28:49:255,0,228	1/1:1,38:39:255,97,0
+chr21	22277803	chr21:22277803:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:21,31:52:255,0,220	0/0:41,0:41:0,121,255
+chr21	22278107	chr21:22278107:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:30:255,86,0	1/1:0,15:16:255,48,0	1/1:0,14:15:255,45,0
+chr21	22282463	chr21:22282463:M	TCTCTCTCTCTCTCTCTCTCTCTCTC	<17>	.	.	Motif=TC	GT:AD:DP:PL	0/1:22,8:30:127,0,255	0/1:17,18:36:255,0,255	0/1:11,9:20:188,0,242
+chr21	22283049	chr21:22283049:M	TTTTCTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:140,0,86	0/1:3,5:9:68,0,25	0/1:5,14:20:194,0,29
+chr21	22285674	chr21:22285674:M	TATATAGATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,13:33:154,0,255	0/1:23,15:38:160,0,255	0/1:17,20:37:255,0,210
+chr21	22290578	chr21:22290578:M	TGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:25,18:43:255,0,255	0/1:25,31:57:255,0,255	0/1:24,27:52:255,0,255
+chr21	22291414	chr21:22291414:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,9:26:99,0,222	0/1:18,16:34:181,0,218	0/1:12,10:24:120,0,158
+chr21	22294925	chr21:22294925:M	AAAAAAAAAACAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:26:255,0,225	0/1:9,9:18:181,0,191	0/1:7,13:20:255,0,132
+chr21	22295091	chr21:22295091:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:255,30,0	1/1:0,7:8:209,24,0	1/1:0,2:5:98,14,0
+chr21	22295638	chr21:22295638:M	GTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGT	<17>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,5:16:255,89,99,255,0,255	1/2:0,20,14:34:255,236,255,255,0,255	1/2:0,11,10:24:255,189,242,255,0,255
+chr21	22296202	chr21:22296202:M	CATAACATAACATAACATAACATAACATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCAT	<11.6>,<13.6>,<15.6>	.	.	Motif=CATAG	GT:AD:DP:PL	2/3:0,0,8,1:10:255,255,255,22,37,9,240,236,0,231	2/3:0,0,8,2:10:255,255,255,37,67,39,234,229,0,223	1/3:0,11,0,4:15:255,77,109,255,135,255,255,0,255,255
+chr21	22300006	chr21:22300006:M	AATAAATAAATAAATAAATAAATAAATAAA	<10.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,4:4:113,12,0	1/1:0,4:4:113,12,0	1/1:0,10:11:255,33,0
+chr21	22309259	chr21:22309259:M	AATTAATTGATTAATTAATTGTATTAATAATTATTAATAATTATATTAATAATTA	<14.8>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,4:4:65,12,0	1/1:0,9:9:149,26,0
+chr21	22312532	chr21:22312532:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:4,26:32:255,21,0	1/1:3,19:24:255,15,0	1/1:3,35:40:255,55,0
+chr21	22314934	chr21:22314934:M	TATATATATATATATATAATTATATATGTACATATATATA	<18>,<19>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,13,13:26:255,215,176,252,0,176	1/2:0,4,1:5:136,15,3,73,0,58	1/2:0,8,5:13:255,80,56,149,0,112
+chr21	22320057	chr21:22320057:M	ACACACACACACACACACACACACACACACACATATATATATACACATACACATACACACACACACAC	<38>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,4:11:85,0,145	0/1:6,3:9:56,0,142	0/1:1,0:3:6,0,23
+chr21	22320726	chr21:22320726:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,5,5,0:12:255,133,108,148,0,126,244,82,148,229	1/2:0,15,7,0:25:255,188,127,255,0,255,255,115,255,255	1/3:0,10,0,5:16:255,135,102,255,76,255,255,0,255,255
+chr21	22322259	chr21:22322259:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:0,23:23:255,68,0	1/1:2,41:45:255,96,0
+chr21	22326471	chr21:22326471:M	TTTTGTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<38>,<39>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:4:42,0,6,45,18,72	2/2:0,0,2:2:54,39,34,6,6,0	1/2:0,2,3:5:105,52,38,30,0,21
+chr21	22355494	chr21:22355494:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:11:37,68,201,0,102,90	0/1:11,4,0:15:23,0,139,65,151,248	0/2:6,1,4:11:36,50,164,0,69,82
+chr21	22367768	chr21:22367768:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,11,8:22:255,87,79,112,0,165	1/1:3,13,3:19:204,4,0,137,4,204	1/2:0,11,4:19:255,79,42,153,0,143
+chr21	22368161	chr21:22368161:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTGTGTGTGTATGTATGTTTGTGTGTGTGTGTGTG	<34.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,4:11:60,0,44	0/1:3,3:6:33,0,33	0/1:8,5:14:56,0,100
+chr21	22371281	chr21:22371281:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:28:200,0,162	0/0:44,1:47:0,120,255	0/1:28,17:47:185,0,255
+chr21	22386058	chr21:22386058:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,7,4:14:132,38,78,100,0,180	1/2:0,9,8:18:239,129,173,155,0,216	1/2:1,11,7:19:235,102,150,169,0,255
+chr21	22389137	chr21:22389137:M	ATTTATTTATTTATTTATTT	<6>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:21,16:37:181,0,255	1/1:0,29:29:255,86,0
+chr21	22394071	chr21:22394071:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:32:255,95,0	1/1:2,39:42:255,87,0	1/1:1,34:40:255,98,0
+chr21	22397934	chr21:22397934:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,15:17:255,255,255,48,31,0	1/2:2,7,5:16:162,33,45,50,0,100	2/2:0,1,11:14:255,229,197,38,23,0
+chr21	22402360	chr21:22402360:M	TTTTTTTTTTTTTTTATTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,36:40:255,116,0	1/1:0,27:27:255,81,0
+chr21	22409781	chr21:22409781:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<15.2>	.	.	Motif=CCTT	GT:AD:DP:PL	1/1:0,11:13:255,32,0	1/1:0,9:13:217,29,0	1/1:0,18:24:255,55,0
+chr21	22417700	chr21:22417700:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,11:18:171,0,36	1/1:0,16:21:255,50,0	0/1:14,16:33:219,0,149
+chr21	22419763	chr21:22419763:M	ATATATATATATATGTATAT	<22>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:0,6,2:13:153,0,15,140,19,172	2/2:0,0,1:1:12,12,12,3,3,0	1/2:0,3,4:9:123,38,24,84,0,73
+chr21	22420261	chr21:22420261:M	ATGTATGTATTTATGTGTGTAT	<4.5>	.	.	Motif=ATGT	GT:AD:DP:PL	1/1:0,41:42:255,121,0	0/1:12,17:30:221,0,131	1/1:0,55:56:255,162,0
+chr21	22421148	chr21:22421148:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,100,0	0/1:26,20:46:223,0,255	1/1:1,25:26:255,59,0
+chr21	22422148	chr21:22422148:M	ACACACACACACACACACACACACACACACACA	<9.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,36,0:39:255,117,0,255,117,255	1/2:0,9,6:16:255,170,144,234,0,213	1/1:0,38,0:43:255,129,0,255,129,255
+chr21	22422180	chr21:22422180:M	ATATATATATATATA	<3.5>,<9.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,7,0,8:18:255,224,203,255,189,255,255,0,255,255	1/2:0,2,7,1:14:218,156,210,81,0,58,175,131,54,197	3/3:0,0,0,3:3:82,82,82,69,69,62,9,9,9,0
+chr21	22424318	chr21:22424318:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:3,1,26:30:255,255,255,33,69,0	1/2:0,10,13:24:255,188,157,171,0,106	2/2:1,1,25:27:255,255,255,61,61,0
+chr21	22427198	chr21:22427198:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:8:40,0,40	0/0:9,0:9:0,26,136	0/0:4,1:6:0,2,56
+chr21	22431129	chr21:22431129:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,0:5:14,0,100	0/1:4,3:10:114,0,85	0/0:5,0:7:0,15,155
+chr21	22431843	chr21:22431843:M	TTTTATTATCATTTTATTTTATTTTATTTT	<6.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:1,25:26:255,54,0	1/1:0,28:28:255,84,0	1/1:0,30:30:255,90,0
+chr21	22440522	chr21:22440522:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:22:255,45,0	0/1:16,11:30:104,0,218	1/1:1,17:19:255,38,0
+chr21	22445459	chr21:22445459:M	TCTCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,43:45:255,135,0	0/1:19,14:38:255,0,255	1/1:0,36:38:255,114,0
+chr21	22449053	chr21:22449053:M	TTTTTTTCTTTTTTTTGTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:28:255,83,0	0/1:15,10:28:115,0,194	1/1:1,43:44:255,111,0
+chr21	22456607	chr21:22456607:M	GTGTGTGTGTGTGT	<6>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,11:11:139,31,0	0/1:1,3:4:26,0,1	1/1:0,10:10:125,28,0
+chr21	22460603	chr21:22460603:M	ATATATATATATATAATTATATTTAAAAATATAATTATATATAT	<21>,<23>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,6,14:23:165,151,242,61,0,70	1/2:0,2,2:5:32,21,30,21,0,31	1/2:0,4,11:16:123,118,191,40,0,41
+chr21	22461339	chr21:22461339:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:170,18,0	0/1:0,2:3:48,0,4	1/1:0,7:9:216,24,0
+chr21	22481465	chr21:22481465:M	AAAAAAAAAAAAAAAGAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,15:16:255,255,236,48,46,0	2/2:0,1,14:19:255,249,209,47,33,0	1/2:0,3,8:12:216,117,88,36,0,13
+chr21	22508091	chr21:22508091:M	TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:18,0,23	0/0:5,0:5:0,15,83	0/1:5,3:8:28,0,61
+chr21	22511605	chr21:22511605:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,6:19:53,0,168	0/1:8,7:16:73,0,99	1/1:1,11:13:184,20,0
+chr21	22553830	chr21:22553830:M	ACACACACACACACACACATACACACTCATACACACAC	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,27:29:255,86,0	1/1:0,26:26:255,78,0	1/1:0,26:28:255,83,0
+chr21	22556100	chr21:22556100:M	TATATATATATATATATATATATATGTATATATATATGTATATATA	<19>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,28:30:255,89,0	1/1:0,14:14:255,42,0	1/1:0,11:12:255,36,0
+chr21	22558509	chr21:22558509:M	TTTTCTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:136,15,0	1/1:0,7:8:237,24,0	1/1:0,4:6:168,18,0
+chr21	22559635	chr21:22559635:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,4:6:154,68,51,34,0,17	1/2:0,3,5:8:202,82,59,49,0,26	1/2:0,1,3:4:102,50,39,17,0,5
+chr21	22562387	chr21:22562387:M	CACACACACACACACACAAACACACACACACACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,22:24:255,71,0	1/1:0,29:29:255,87,0
+chr21	22562733	chr21:22562733:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:11,4,0	1/1:0,0:2:7,2,0	1/1:0,3:4:91,11,0
+chr21	22563552	chr21:22563552:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,27:31:255,91,0	1/1:0,19:22:255,65,0
+chr21	22564127	chr21:22564127:M	TTTTTTTTTGTTTGTTTTGTTTTG	<5.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,30:30:255,90,0	1/1:0,32:32:255,96,0
+chr21	22567823	chr21:22567823:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,10:11:255,172,142,30,16,0	0/2:1,1,4:6:89,47,46,0,2,12	1/2:0,4,6:10:192,92,64,51,0,33
+chr21	22569707	chr21:22569707:M	AAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7,1:8:207,24,0,129,6,108	1/2:0,3,5:9:215,85,60,60,0,37	1/1:0,11,1:13:255,38,0,220,20,187
+chr21	22570428	chr21:22570428:M	GTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,34:35:255,105,0	1/1:0,39:39:255,117,0	1/1:0,28:29:255,87,0
+chr21	22575672	chr21:22575672:M	ATATATATATATAT	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,16:21:86,27,0	1/1:0,9:10:52,18,0	1/1:0,24:24:138,48,0
+chr21	22578639	chr21:22578639:M	AAAAAAAAAATAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,35:38:255,110,0	1/1:0,36:36:255,106,0
+chr21	22579088	chr21:22579088:M	TTTTTTTTTCTTTTTTTTCTTTTTCTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:1,25:26:255,59,0	1/1:0,21:21:255,62,0
+chr21	22587030	chr21:22587030:M	AAAAAAAAAAAAAGAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:43:255,126,0	1/1:1,26:30:255,67,0	1/1:0,38:39:255,114,0
+chr21	22593282	chr21:22593282:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:33:233,0,160	0/1:11,11:24:122,0,141	0/0:23,1:25:0,55,255
+chr21	22593864	chr21:22593864:M	AAAAAAAAAAAAAAAAAA	<17>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,2,3:10:58,44,114,0,52,162	0/0:2,0,0:3:0,9,46,6,42,57	0/1:11,4,0:16:23,0,158,67,192,255
+chr21	22602555	chr21:22602555:M	TATATATATATATATATATATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:6:139,15,0	1/1:0,6:7:177,21,0	1/1:0,25:25:255,75,0
+chr21	22612048	chr21:22612048:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,10:17:130,0,76	0/1:10,6:18:53,0,130	0/0:13,0:13:0,38,228
+chr21	22615153	chr21:22615153:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,4:6:94,58,52,28,0,13	1/1:0,3,0:4:101,12,0,72,12,62	1/2:0,1,3:5:68,42,39,17,0,5
+chr21	22615924	chr21:22615924:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:36:202,0,251	1/1:0,29:29:255,85,0	0/1:14,18:32:234,0,161
+chr21	22622798	chr21:22622798:M	ACACACACACACACACACACACACACACACA	<20.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,6,0,0:23:129,0,255,177,255,255,177,255,255,255	1/3:0,7,0,3:12:255,85,58,255,51,254,212,0,212,203	0/2:18,0,8,0:27:182,235,255,0,255,255,149,255,255,255
+chr21	22624464	chr21:22624464:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,22:37:255,0,174	1/1:0,37:37:255,109,0	0/1:18,18:37:232,0,222
+chr21	22629244	chr21:22629244:M	TATATATATACATATACACATATATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,15:24:255,0,172	1/1:0,28:28:255,84,0	0/1:7,13:20:255,0,132
+chr21	22631152	chr21:22631152:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23:39:255,0,189	1/1:0,36:36:255,106,0	0/1:25,26:51:255,0,255
+chr21	22633079	chr21:22633079:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,13:38:134,0,255	1/1:1,37:38:255,94,0	0/0:40,2:42:0,87,255
+chr21	22634146	chr21:22634146:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,9:27:86,0,252	1/1:2,24:27:255,44,0	0/0:23,1:26:0,48,255
+chr21	22634315	chr21:22634315:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	<11.5>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:9,11:20:123,0,90	0/0:24,1:25:0,57,255	1/1:0,27:27:255,79,0
+chr21	22634363	chr21:22634363:M	TAGATAGATAGATA	<2.5>,<4.5>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:27,18,0:45:208,0,255,255,255,255	1/2:0,23,19:42:255,255,255,255,0,255	0/0:53,0,0:53:0,156,255,156,255,255
+chr21	22642380	chr21:22642380:M	TTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:19:255,57,0	1/1:1,13:14:255,8,0	1/1:0,31:33:255,98,0
+chr21	22647136	chr21:22647136:M	TTTTCTTTTCTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:30:255,70,0	0/1:16,11:29:128,0,194	1/1:0,17:19:255,55,0
+chr21	22651065	chr21:22651065:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,7:21:255,122,82,114,0,76	1/2:0,12,4:18:255,76,29,201,0,153	2/2:0,0,18:22:255,255,255,55,44,0
+chr21	22651693	chr21:22651693:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,13:16:135,27,0	0/1:14,7:22:21,0,98	0/1:9,6:19:34,0,58
+chr21	22651706	chr21:22651706:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTGTGTGTGTGT	<31.5>,<67.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,0,7:10:96,69,63,27,0,8	0/1:3,3,1:9:86,0,60,86,65,158	2/2:0,0,3:4:38,38,38,8,8,0
+chr21	22651754	chr21:22651754:M	TATATATATATATGTATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,2:2:25,6,0	0/0:10,1:11:0,21,255	1/1:0,3:3:37,8,0
+chr21	22651784	chr21:22651784:M	TGTGTGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,7:7:85,19,0	0/0:13,1:14:0,30,255	1/1:0,3:3:37,8,0
+chr21	22651794	chr21:22651794:M	TATATATATATATA	<5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,3,2:6:53,0,10,41,1,70	0/0:12,0,1:13:0,36,255,26,255,255	2/2:0,0,3:3:37,37,37,8,8,0
+chr21	22651807	chr21:22651807:M	ACACACACACACA	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:47,11,0	0/0:10,2:12:0,12,247	1/1:0,4:4:47,11,0
+chr21	22651863	chr21:22651863:M	ATATATATATA	<4.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,2:6:90,23,11,79,0,194	0/1:13,3,1:17:8,0,190,45,223,255	1/2:0,5,3:8:115,33,18,96,0,241
+chr21	22651885	chr21:22651885:M	ATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,1:18:0,28,255	1/1:0,6:8:124,21,0	0/0:25,1:29:0,58,255
+chr21	22651933	chr21:22651933:M	GTGTGTGTGTGT	<5>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,3,7:10:110,74,65,44,0,54	0/1:7,2,1:10:3,0,77,19,92,220	1/2:0,6,3:9:103,31,14,88,0,141
+chr21	22651944	chr21:22651944:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,2:2:25,6,0	0/0:9,1:11:0,20,246	1/1:0,3:3:36,8,0
+chr21	22651959	chr21:22651959:M	ACACACACACACACACACACACACACACACATACACACA	<14>,<16>,<67.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,4,0,4:8:154,43,31,136,43,127,111,0,93,100	0/1:8,4,0,2:18:76,0,223,73,207,255,87,213,255,255	1/2:1,8,6,4:20:255,114,98,179,0,165,255,95,159,255
+chr21	22675107	chr21:22675107:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<12.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,11:17:255,9,0	1/1:0,13:17:255,43,0
+chr21	22675946	chr21:22675946:M	AAAAAAAAAAAAGAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,21:22:255,46,0	0/1:18,15:34:173,0,218	0/1:16,20:37:255,0,183
+chr21	22680392	chr21:22680392:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:4,26:31:255,10,0	1/1:1,29:31:255,73,0	1/1:3,32:35:255,49,0
+chr21	22702028	chr21:22702028:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,6,78	0/1:4,3:8:39,0,45	0/0:7,1:8:0,6,104
+chr21	22721717	chr21:22721717:M	TTATTATTATTATTATTATTATTATTATTATT	<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:9,10:20:219,0,193	0/0:17,0:17:0,51,255	0/1:10,12:22:255,0,211
+chr21	22742290	chr21:22742290:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:14:28,0,123	0/1:9,3:15:16,0,126	0/0:9,0:10:0,29,161
+chr21	22743177	chr21:22743177:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,60,0	1/1:1,29:34:255,65,0	1/1:0,25:31:255,78,0
+chr21	22771546	chr21:22771546:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,11:12:177,17,0	0/1:1,3:5:48,0,3	1/1:2,9:12:132,0,0
+chr21	22788715	chr21:22788715:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,3,12	1/1:0,5:9:195,24,0	0/0:1,0:1:0,3,31
+chr21	22794798	chr21:22794798:M	AAAGAGAAAGAGAAGGAGACGAGAGAGAGATAGATAGAGAGAGAGAGAGAGAGAAAGACAAAGAAAAAGAAAAAGAAAGAAAAAGA	<13>	.	.	Motif=AAAGAG	GT:AD:DP:PL	1/1:0,3:4:68,9,0	1/1:0,7:9:171,24,0	1/1:0,4:7:84,7,0
+chr21	22800510	chr21:22800510:M	TATATATACATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:4,9:16:239,0,110	0/0:15,0:21:0,63,255	0/1:12,5:19:116,0,255
+chr21	22800534	chr21:22800534:M	TTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,0,2:17:27,37,255,0,255,255	1/2:0,3,5:10:201,70,47,42,0,17	0/2:6,1,7:16:165,81,214,0,141,132
+chr21	22807992	chr21:22807992:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/0:21,1:25:0,52,255	0/0:21,1:23:0,50,255	0/1:16,8:24:70,0,212
+chr21	22810958	chr21:22810958:M	GAAGGAAGGAAAGAAGGAAGGAAGGGAGGGAGGGAGGGCAGAGAGAAAGAAGGAAGGGAGGAAGGAAGGAAGGAAG	<20>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,3:3:43,9,0	0/0:3,0:4:0,11,54	1/1:0,6:9:84,17,0
+chr21	22815228	chr21:22815228:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,35:36:255,255,255,106,108,0	1/2:1,21,16:39:255,255,255,255,0,255	2/2:1,0,38:39:255,255,255,96,114,0
+chr21	22817959	chr21:22817959:M	AGAGAGAGAGAGA	<8>,<9.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,18,8:26:255,145,68,255,0,247	0/1:17,20,8:46:255,0,169,154,156,255	1/1:1,23,4:34:255,75,0,255,24,255
+chr21	22825191	chr21:22825191:M	TATATATATATATATATATATATATATATAT	<7.5>,<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,25,20:45:255,255,225,255,0,255	0/2:5,1,17:24:255,255,255,0,123,87	1/2:0,19,22:41:255,255,255,255,0,211
+chr21	22825362	chr21:22825362:M	ACACACACACACACACACACACACACACACA	<16.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,15,10:28:255,255,232,253,0,255	0/2:11,0,8:21:188,223,255,0,198,255	1/2:1,14,10:25:255,247,220,229,0,255
+chr21	22825758	chr21:22825758:M	ACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,26:52:255,0,255	0/1:19,21:40:255,0,228	0/1:23,20:43:252,0,255
+chr21	22832286	chr21:22832286:M	AAAAAACAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:38:232,0,255	0/1:17,18:35:221,0,201	0/1:23,20:43:246,0,255
+chr21	22832328	chr21:22832328:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	0/1:26,22:49:255,0,255	1/1:1,39:40:255,100,0
+chr21	22834374	chr21:22834374:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,19:21:255,25,0	0/0:24,0:24:0,70,255	1/1:1,20:21:255,44,0
+chr21	22837419	chr21:22837419:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,13:26:112,0,66	0/1:8,14:28:129,0,46	0/0:15,2:17:0,22,162
+chr21	22845624	chr21:22845624:M	ATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,15:31:193,0,210	0/1:26,13:41:121,0,255	1/1:0,40:40:255,118,0
+chr21	22879455	chr21:22879455:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:9,0,27	0/1:7,2:11:13,0,98	1/1:0,8:10:158,29,0
+chr21	22886743	chr21:22886743:M	TATATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:10:105,26,0	.	.
+chr21	22889371	chr21:22889371:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,23:42:255,0,232	0/1:25,19:44:208,0,255	1/1:1,35:36:255,88,0
+chr21	22889807	chr21:22889807:M	GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTATGTGTATGTG	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,12:25:150,0,170	0/1:10,14:24:177,0,106	0/1:18,15:33:177,0,232
+chr21	22890571	chr21:22890571:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAA	<34>,<36>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,8,3,0:15:110,29,43,101,0,177,136,45,199,255	0/1:3,7,1,0:15:67,0,20,84,21,174,96,42,194,244	2/3:1,0,6,3:11:118,139,205,28,39,14,54,83,0,68
+chr21	22898463	chr21:22898463:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,20:30:255,0,101	0/1:14,14:29:175,0,166	1/1:0,25:26:255,76,0
+chr21	22899484	chr21:22899484:M	TCTATATATCTATCTATCTATCTATCTATCTATCTATCGATCTATCTATCTACCTATC	<15.5>,<16.5>,<17.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:3,6,3,0:12:65,0,1,19,0,66,67,28,95,177	1/2:0,5,6,0:11:151,65,36,43,0,25,120,51,55,142	1/3:5,6,0,5:18:126,69,84,67,68,140,9,0,108,153
+chr21	22902958	chr21:22902958:M	AAAAAAAAAAAAAAAAAAAGAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,93	0/0:1,0:1:0,3,17	0/1:2,5:7:65,0,14
+chr21	22903820	chr21:22903820:M	ATAGATAGATAGATAGATAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAG	<13.8>,<16.8>	.	.	Motif=ATAG	GT:AD:DP:PL	1/2:0,15,3:18:255,81,36,255,0,255	1/2:0,9,7:16:255,187,160,235,0,218	1/1:0,19,0:19:255,57,0,255,57,255
+chr21	22905669	chr21:22905669:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:0,37:37:255,109,0	1/1:0,28:28:255,83,0
+chr21	22906103	chr21:22906103:M	ATATATATATATATATATATAT	<11.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,17,0,6:30:210,148,121,159,78,255,87,0,255,255	1/2:2,7,10,0:21:214,178,165,14,0,166,131,115,211,255	1/3:0,9,0,9:25:241,202,189,139,99,255,49,0,220,255
+chr21	22924336	chr21:22924336:M	AAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:210,26,0	0/1:1,1:2:22,0,23	1/1:0,5:10:201,27,0
+chr21	22924349	chr21:22924349:M	ATATATATATATATATATATA	<11>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:10,0,10:21:199,199,245,0,85,196	0/2:2,0,0:5:6,10,22,0,17,38	1/2:1,4,7:12:170,131,117,25,0,69
+chr21	22935687	chr21:22935687:M	TTTTATTTTAT	<1.4>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,2:3:54,6,0	1/1:0,3:3:81,9,0	.
+chr21	22935695	chr21:22935695:M	TATATATATATATATATATATATATATATATCTAGTATATATA	<18.5>,<19.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/3:0,9,0,7:17:255,115,173,255,202,255,255,0,158,248	1/3:0,0,0,1:2:24,16,26,26,29,38,11,0,10,8	2/3:0,0,5,1:6:143,96,94,16,28,13,135,81,0,138
+chr21	22940332	chr21:22940332:M	TACATAGACTATATATATATATATACATATACA	<5.2>	.	.	Motif=TACATA	GT:AD:DP:PL	1/1:0,32:33:255,96,0	1/1:0,29:29:255,87,0	0/1:23,17:40:255,0,255
+chr21	22950542	chr21:22950542:M	TTTTTTTTTTTTTTT	<13>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,27:28:255,255,255,64,84,0	2/2:1,0,23:28:255,255,255,64,83,0	1/2:0,19,18:39:255,255,255,255,0,255
+chr21	22951905	chr21:22951905:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/0:30,0:32:0,91,255	0/1:13,27:43:255,0,121
+chr21	22952682	chr21:22952682:M	TGTGTGTGTGT	<3.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,39:39:255,117,0	0/1:19,13:32:255,0,255
+chr21	22952822	chr21:22952822:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<19.5>,<20.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,23,0:24:255,67,0,255,68,255	1/1:1,18,0:22:255,10,0,255,57,255	1/2:1,7,12:21:255,196,157,88,0,78
+chr21	22972340	chr21:22972340:M	ATATATACATATATATAT	<12.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,5,12,8:30:255,217,140,98,0,23,203,18,9,146	1/2:0,3,5,3:13:255,88,52,55,0,19,112,11,20,85	1/3:0,10,0,11:25:255,253,198,248,132,189,215,0,109,162
+chr21	22972357	chr21:22972357:M	TTTTTTTTTTTTTTTT	<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,9,7:20:255,177,163,117,0,233	0/2:6,0,5:12:112,129,197,0,84,144	1/1:1,23,0:31:255,65,0,255,84,255
+chr21	22976433	chr21:22976433:M	TAGATAGATAGATAGATAGATAGATAG	<9.8>,<10.8>	.	.	Motif=TAGA	GT:AD:DP:PL	1/2:0,14,10:24:255,179,110,250,0,182	2/2:0,0,16:16:255,255,255,48,47,0	1/1:0,19,0:19:255,57,0,255,56,255
+chr21	22977752	chr21:22977752:M	ACACACACACACACACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,12:31:123,0,220	0/1:15,8:23:68,0,186	0/1:13,7:20:63,0,167
+chr21	22991104	chr21:22991104:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,80,0	1/1:0,33:35:255,99,0	0/1:18,9:31:185,0,255
+chr21	23011953	chr21:23011953:M	AGAGAGACAGAGAGAGGAGGGAGAGAGAGAGAGAGAGGAGAGAG	<24>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,18:19:255,54,0	1/1:0,19:19:255,57,0	0/1:14,6:20:109,0,255
+chr21	23012986	chr21:23012986:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,8:16:112,0,48	0/1:6,2:8:10,0,79	0/1:4,3:8:38,0,47
+chr21	23016025	chr21:23016025:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,16:34:202,0,209	0/1:23,11:36:109,0,255	1/1:1,42:46:255,116,0
+chr21	23016132	chr21:23016132:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,13:41:127,0,255	0/1:14,18:32:230,0,157	0/1:24,24:48:255,0,255
+chr21	23017712	chr21:23017712:M	TTTTTTTTTTTGTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,10:24:255,255,223,255,0,255	1/2:0,16,11:30:255,255,255,255,0,255	0/1:17,10,0:28:239,0,255,255,255,255
+chr21	23019855	chr21:23019855:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,17:43:199,0,255	0/1:16,19:36:240,0,176	0/0:42,0:44:0,129,255
+chr21	23020514	chr21:23020514:M	AAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,10:24:76,0,92	0/1:19,6:30:7,0,194	0/0:32,0:37:0,91,255
+chr21	23021316	chr21:23021316:M	CCCCCCCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	2/2:0,0,3:3:94,56,48,9,9,0	1/1:0,5,0:6:175,18,0,106,17,90	2/2:0,0,4:6:138,76,62,16,4,0
+chr21	23022631	chr21:23022631:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,42:43:255,108,0	1/1:0,46:46:255,135,0	0/1:19,23:42:255,0,231
+chr21	23028073	chr21:23028073:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,6,8:14:255,116,98,103,0,63	1/2:0,9,4:14:255,55,26,156,0,120	0/1:7,6,0:13:130,0,159,100,117,183
+chr21	23029660	chr21:23029660:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:34,0,25	.	1/1:0,3:3:50,9,0
+chr21	23032661	chr21:23032661:M	TTTGTTTTTCTGTTTTTTGTTTGTTTGTTTGTTT	<6.5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:2,0:4:0,12,76	0/1:3,3:11:79,0,69	1/1:0,4:4:90,12,0
+chr21	23032878	chr21:23032878:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,1,15:24:224,209,255,0,101,63	0/2:10,1,13:24:169,175,255,0,156,106	1/2:0,20,13:33:255,199,139,255,0,255
+chr21	23033778	chr21:23033778:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:35,15:50:133,0,255	0/0:44,0:44:0,129,255	0/0:52,1:53:0,138,255
+chr21	23036584	chr21:23036584:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,3,6:19:120,60,181,0,122,221	0/2:9,1,6:18:119,87,215,0,156,231	1/2:0,4,8:12:255,141,108,60,0,36
+chr21	23055398	chr21:23055398:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,34:34:255,100,0	0/1:9,27:36:255,0,60
+chr21	23055425	chr21:23055425:M	AGAAAAGAAAAAAAA	<2.8>	.	.	Motif=AGAAA	GT:AD:DP:PL	1/1:0,32:32:255,94,0	1/1:0,32:33:255,97,0	1/1:1,28:30:255,61,0
+chr21	23056893	chr21:23056893:M	CTTTCTTTCTTTCTTT	<5>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:17,0:17:0,47,217	0/0:18,0:18:0,50,224	0/1:8,11:20:95,0,45
+chr21	23056906	chr21:23056906:M	TTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:33,3,0	1/1:0,3:5:92,9,0	0/1:11,2:13:22,0,255
+chr21	23062061	chr21:23062061:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:132,15,0	1/1:0,5:6:139,7,0	0/1:7,3:11:56,0,192
+chr21	23064939	chr21:23064939:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:13:0,38,217	0/0:16,1:19:0,39,255	0/1:3,3:9:26,0,53
+chr21	23071073	chr21:23071073:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,50:51:255,132,0	1/1:0,36:36:255,106,0	1/1:0,45:45:255,133,0
+chr21	23072542	chr21:23072542:M	TTTTTTTTTTTTTTT	<16>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,15,0:20:255,227,182,43,21,0,245,180,40,222	1/2:1,7,5,0:13:170,54,31,63,0,70,148,55,104,221	2/3:0,0,8,6:14:255,252,222,84,82,43,110,89,0,71
+chr21	23074392	chr21:23074392:M	AAATTAAATTAATAAATTAAATTATTATTAATTAATTAAATTA	<7.8>	.	.	Motif=AAATT	GT:AD:DP:PL	1/1:0,20:25:255,62,0	1/1:0,10:12:255,31,0	1/1:0,11:14:255,33,0
+chr21	23081511	chr21:23081511:M	TTTGTTTGTTTGCTTGTTTGTTTTTTGT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/0:27,0:27:0,81,255	0/1:19,18:37:255,0,255
+chr21	23083054	chr21:23083054:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:34:0,100,255	0/0:30,0:31:0,91,255	0/1:19,22:43:255,0,240
+chr21	23086950	chr21:23086950:M	TTTTTCTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:29:0,84,255	0/0:18,0:19:0,55,255	0/1:15,11:27:105,0,182
+chr21	23087957	chr21:23087957:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,93,0	1/1:2,24:28:255,46,0	1/1:1,40:43:255,108,0
+chr21	23088060	chr21:23088060:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:45,1:46:0,117,255	0/1:16,14:30:168,0,206
+chr21	23098465	chr21:23098465:M	ACACACACACATACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:39,0:39:0,115,255	0/1:15,19:34:255,0,183
+chr21	23101985	chr21:23101985:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,63,0	1/1:0,14:16:255,42,0	0/1:10,8:23:167,0,209
+chr21	23105277	chr21:23105277:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,48:49:255,144,0	1/1:0,28:30:255,87,0	0/1:24,26:51:255,0,255
+chr21	23107329	chr21:23107329:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:38,0:38:0,112,255	0/1:21,27:48:255,0,253
+chr21	23115298	chr21:23115298:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,26:28:255,83,0	1/1:0,28:32:255,94,0
+chr21	23125620	chr21:23125620:M	TTTTTCTTTTTTTTTGTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,19:28:255,0,91	1/1:1,36:37:255,91,0	0/1:21,25:46:255,0,255
+chr21	23128903	chr21:23128903:M	TTTTGTTTTTATTTTGTTTTGTTTTGTTTTGTTTTTGTTTT	<10.2>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:15,8:23:145,0,255	1/1:0,20:20:255,60,0	0/1:8,7:15:145,0,170
+chr21	23139975	chr21:23139975:M	AAAAAAATAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,10:27:112,0,244	1/1:0,39:39:255,115,0	0/1:16,24:41:255,0,186
+chr21	23151602	chr21:23151602:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,3:12:19,0,118	0/0:18,0:20:0,58,255	0/1:11,4:17:21,0,165
+chr21	23169907	chr21:23169907:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,14:38:153,0,255	1/1:0,34:35:255,102,0	0/1:28,13:41:118,0,255
+chr21	23173559	chr21:23173559:M	TATATATATATATATATATATATA	<14>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:13:233,24,0	1/1:0,0:2:30,6,0	1/1:0,3:5:88,9,0
+chr21	23198691	chr21:23198691:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGTTTTTGTGTGTGTGTG	<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,9:13:212,0,69	1/1:0,22:22:255,66,0	0/1:8,9:18:208,0,164
+chr21	23198925	chr21:23198925:M	AACAACAACAACAA	<3.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:17,22:39:255,0,255	1/1:0,34:34:255,102,0	0/1:18,20:38:255,0,255
+chr21	23204441	chr21:23204441:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<20>,<23>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,6,3:9:219,74,56,145,0,136	1/1:0,1,0:1:28,3,0,28,3,28	.
+chr21	23222767	chr21:23222767:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:29:255,85,0	1/1:0,24:24:255,70,0	1/1:3,26:32:255,40,0
+chr21	23225544	chr21:23225544:M	TATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,37:38:255,102,0	1/1:0,19:19:255,57,0	1/1:0,28:28:255,84,0
+chr21	23226847	chr21:23226847:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:33:185,0,240	1/1:0,40:40:255,118,0	0/1:17,29:47:255,0,183
+chr21	23231341	chr21:23231341:M	GCTAAGCTAAG	<1.8>	.	.	Motif=GCTAA	GT:AD:DP:PL	0/1:19,24:43:255,0,255	0/0:49,0:49:0,147,255	0/1:16,27:43:255,0,255
+chr21	23242236	chr21:23242236:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<13>,<14>,<16>	.	.	Motif=AG	GT:AD:DP:PL	1/3:0,12,5,4:22:255,48,53,108,20,83,255,0,68,255	2/3:0,0,16,6:23:255,222,253,59,105,48,255,152,0,241	1/2:0,13,12,5:33:255,101,85,104,0,55,255,34,51,255
+chr21	23242269	chr21:23242269:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,5:16:84,0,231	1/1:0,19:26:255,44,0	0/1:12,4:20:65,0,255
+chr21	23243414	chr21:23243414:M	TATATTTATATGTGTAAATGTATATATATATTTATATGTGTAAATGTATATATATATTTATAT	<2.2>,<6.2>	.	.	Motif=TATATT	GT:AD:DP:PL	1/2:1,9,4:24:255,153,124,255,0,255	1/2:0,1,3:6:164,94,85,70,0,60	1/2:3,5,6:20:255,173,210,223,0,255
+chr21	23257660	chr21:23257660:M	ATATATATATA	<4.5>,<7.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,1,20:25:255,255,255,45,32,0	1/2:0,11,17:33:255,255,255,113,0,192	2/2:0,1,15:21:255,255,255,35,35,0
+chr21	23257670	chr21:23257670:M	ACACACACACACACACACACACACACACACACACACACACACACATATACACACACACATATATATACACACACACACACACACACA	<41.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:6:96,15,0	1/1:0,3:4:61,9,0	0/1:0,0:1:0,0,0
+chr21	23266223	chr21:23266223:M	ACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:3,19:22:255,15,0	1/1:1,24:25:255,57,0	1/1:0,8:9:130,23,0
+chr21	23273075	chr21:23273075:M	ATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	1/1:5,36:41:255,26,0	1/1:2,48:51:255,114,0	1/1:1,48:50:255,129,0
+chr21	23274906	chr21:23274906:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12,0:14:209,23,0,244,39,255	1/1:0,11,0:13:209,37,0,239,38,255	1/2:4,4,7:15:90,61,161,10,0,82
+chr21	23275272	chr21:23275272:M	GTGCACGTGCAC	<1.7>	.	.	Motif=GTGCAC	GT:AD:DP:PL	1/1:0,9:9:234,27,0	1/1:0,14:14:255,42,0	0/1:19,5:24:58,0,255
+chr21	23275281	chr21:23275281:M	CACACACACACACACACACACACACACACACACACACGCACA	<15>,<17>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,42:45:255,255,255,135,129,0	2/2:0,0,26:26:255,255,255,78,78,0	1/2:0,17,16:34:255,255,255,255,0,255
+chr21	23282834	chr21:23282834:M	TTATTTTATTTTTTTTA	<3.6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:39,0:39:0,117,255	0/0:18,0:18:0,54,255	0/1:20,18:38:255,0,255
+chr21	23284448	chr21:23284448:M	ACACACACACACACACACACACACACACA	<12.5>,<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39,2:42:255,118,0,255,87,255	1/1:0,39,2:42:255,120,0,255,90,255	1/2:1,22,13:38:255,156,111,255,0,254
+chr21	23286586	chr21:23286586:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:39:255,95,0	1/1:1,44:45:255,115,0	1/1:0,43:44:255,129,0
+chr21	23291206	chr21:23291206:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:12:86,0,34	1/1:1,7:8:98,7,0	1/1:1,4:6:58,0,0
+chr21	23296677	chr21:23296677:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/0:26,3:29:0,32,255	0/1:20,30:50:255,0,222
+chr21	23297320	chr21:23297320:M	TAGGTAGGTAGGTAGGTAGGTAGGTAGGTAG	<6.8>	.	.	Motif=TAGG	GT:AD:DP:PL	1/1:0,28:29:255,83,0	1/1:1,30:34:255,80,0	1/1:0,19:26:255,63,0
+chr21	23297348	chr21:23297348:M	TAGATAGATAGATAGATAGAAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGAT	<16.8>,<19.8>	.	.	Motif=TAGA	GT:AD:DP:PL	0/2:5,0,4:9:81,98,166,0,77,108	0/0:16,0,0:17:0,49,254,48,255,255	1/2:0,5,6:11:205,147,138,76,0,110
+chr21	23298313	chr21:23298313:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:13:179,20,0	1/1:1,10:12:161,18,0	0/1:8,8:19:107,0,86
+chr21	23299937	chr21:23299937:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:1,38:41:255,102,0	1/1:2,29:32:255,58,0
+chr21	23302016	chr21:23302016:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:15:0,43,252	0/1:4,3:8:38,0,45	0/1:4,4:10:62,0,41
+chr21	23302187	chr21:23302187:M	TTTTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:175,21,0	1/1:0,6:6:179,18,0	1/1:0,9:9:255,27,0
+chr21	23313960	chr21:23313960:M	ATGTATGTATGTATGTATGTATGTATGTATGTAT	<9.5>	.	.	Motif=ATGT	GT:AD:DP:PL	0/0:11,2:23:0,30,168	0/1:7,6:17:25,0,63	0/1:6,10:22:67,0,39
+chr21	23313991	chr21:23313991:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTGTCTGTCTAGCTATC	<15.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:8,6:14:106,0,162	1/1:0,18:18:255,54,0	0/0:14,0:14:0,42,255
+chr21	23317226	chr21:23317226:M	ATATTATATTATATTATATTATA	<7.6>,<8.6>	.	.	Motif=ATATT	GT:AD:DP:PL	1/2:0,10,12:22:255,231,170,193,0,131	2/2:0,0,3:3:90,63,55,9,9,0	0/1:24,9,0:33:169,0,255,168,255,255
+chr21	23317324	chr21:23317324:M	ACACACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:26,2:28:0,44,255	0/0:23,1:24:0,52,255	0/1:8,13:21:178,0,85
+chr21	23319544	chr21:23319544:M	ATATATATATATGTATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,51:51:255,150,0	1/1:0,42:42:255,124,0
+chr21	23337081	chr21:23337081:M	CTCTTCTCTCTCTCTCTCTCTGTCTTTCTCTCT	<15.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,23:25:255,66,0	1/1:0,35:41:255,103,0	1/1:0,39:43:255,112,0
+chr21	23344054	chr21:23344054:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:9:122,9,0	0/1:3,2:6:19,0,35	1/1:0,4:5:69,12,0
+chr21	23347928	chr21:23347928:M	ATATATATATATATATATATATATA	<10.5>,<14.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:1,9,2,11:26:255,255,255,255,129,255,218,0,239,230	1/2:0,15,2,0:18:255,47,6,255,0,255,255,26,255,255	2/3:0,0,7,7:14:255,255,255,96,96,54,94,96,0,54
+chr21	23348086	chr21:23348086:M	GTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,8:19:196,0,253	0/1:11,10:24:255,0,238	0/0:23,0:24:0,72,255
+chr21	23349529	chr21:23349529:M	ATATATATATACATATATATATACACACATATATAATATAAATATATATTTATAATTATATAAATATATA	<5>,<21.5>,<22.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,2,5,6:14:248,198,217,62,34,55,48,20,0,41	1/2:1,3,3,0:7:123,48,64,53,0,69,94,41,78,111	1/3:0,2,0,10:12:255,246,240,191,140,163,51,0,49,21
+chr21	23350532	chr21:23350532:M	TATATTTATAGTTATATGAATATATCTAATATATATTTATAGTTATAT	<2.8>	.	.	Motif=TATATT	GT:AD:DP:PL	0/1:8,13:21:255,0,129	.	0/1:2,5:7:123,0,27
+chr21	23355503	chr21:23355503:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,56,0	1/1:2,9:12:130,1,0	1/1:0,16:17:255,50,0
+chr21	23356968	chr21:23356968:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,1:12:0,6,208	0/0:11,1:15:0,5,255	0/1:12,5:19:82,0,252
+chr21	23367655	chr21:23367655:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:17,1,13,0:31:255,220,255,0,255,255,248,255,255,255	1/2:0,10,12,0:22:255,210,146,176,0,111,255,177,174,255	0/3:5,1,0,13:19:184,205,255,188,255,255,0,63,79,37
+chr21	23371763	chr21:23371763:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<25>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:11,17,56,0,17,11	1/2:0,4,3:8:162,49,70,122,0,113	0/2:1,0,0:3:16,21,51,0,17,8
+chr21	23385554	chr21:23385554:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,43:43:255,127,0	1/1:0,55:55:255,162,0
+chr21	23388243	chr21:23388243:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:31:0,90,255	0/1:15,10:25:228,0,255	0/0:33,1:42:0,87,255
+chr21	23396673	chr21:23396673:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:18,0,4:22:49,73,255,0,255,255	0/0:35,1,0:36:0,88,255,105,255,255	1/2:0,16,14:30:255,253,170,250,0,208
+chr21	23401019	chr21:23401019:M	AAAAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,16:29:243,0,82	0/0:33,3:36:0,53,255	1/1:1,20:22:255,46,0
+chr21	23401344	chr21:23401344:M	TTAAAATTAAAA	<1.3>	.	.	Motif=TTAAAA	GT:AD:DP:PL	0/1:15,5:20:56,0,255	0/0:20,1:22:0,43,255	0/0:17,0:18:0,54,255
+chr21	23404278	chr21:23404278:M	CTTTTCTTTTTCCTTTT	<2.2>	.	.	Motif=CTTTTC	GT:AD:DP:PL	0/1:22,15:37:255,0,255	0/1:19,6:25:79,0,255	0/1:18,11:29:189,0,255
+chr21	23404291	chr21:23404291:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,12:24:255,186,152,199,0,134	2/2:1,1,21:23:255,255,255,50,50,0	1/2:1,15,14:30:255,193,173,250,0,181
+chr21	23404753	chr21:23404753:M	AACAAACAAACAAACAAACAAACAAACAAAACAAACAAACAAAAAACCAAAGCCAAAACAAACAAACAAACAAAAAACA	<18.8>	.	.	Motif=AACA	GT:AD:DP:PL	1/1:0,11:11:211,33,0	1/1:0,10:10:180,29,0	1/1:0,18:18:255,53,0
+chr21	23418946	chr21:23418946:M	AAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,22:33:255,0,108	0/0:27,0:28:0,82,255	0/1:11,9:21:110,0,139
+chr21	23419977	chr21:23419977:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,16:19:255,1,0	0/1:2,1:3:16,0,43	1/1:0,9:9:236,27,0
+chr21	23424170	chr21:23424170:M	AATAATAATAATAATAATAATAATAATAATAATAATAATA	<10.3>,<12.3>,<15.3>	.	.	Motif=AAT	GT:AD:DP:PL	1/3:0,10,0,8:18:255,222,195,255,225,255,255,0,255,255	1/1:0,11,0,0:11:255,33,0,255,33,255,255,33,255,255	2/3:0,0,13,6:19:255,255,255,165,169,130,237,255,0,255
+chr21	23428356	chr21:23428356:M	AAAAAAAAAAAAAAAAAAACAAAAAAAAA	<23>,<28>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:3:47,54,74,9,9,0	1/2:0,11,6:17:255,98,124,255,0,255	.
+chr21	23430740	chr21:23430740:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<17.5>,<22.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,6,1,5:13:255,255,255,121,136,115,255,255,111,255,157,170,0,145,155	0/1:3,9,0,1,2:15:220,0,66,233,93,255,220,24,255,245,181,40,255,205,255	2/3:0,0,10,8,0:18:255,255,255,97,215,185,255,255,0,240,255,255,215,255,255
+chr21	23436375	chr21:23436375:M	CACACACATGCACACACACACACACACACACACACACAC	<18.5>,<22.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,4,3:8:170,164,163,30,20,14,41,31,0,25	2/3:0,0,1,1:2:51,52,53,11,11,5,11,11,0,5	1/3:1,3,0,3:8:104,82,83,64,42,124,22,0,92,82
+chr21	23436417	chr21:23436417:M	ATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:11:138,26,0	1/1:0,1:2:15,3,0	1/1:0,1:2:15,3,0
+chr21	23436626	chr21:23436626:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTCTCTCCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	<33.5>,<35.5>	.	.	Motif=TC	GT:AD:DP:PL	0/2:5,0,4:9:43,68,173,0,72,60	1/2:0,3,2:7:84,32,35,66,0,85	0/0:4,0,0:4:0,12,68,12,68,68
+chr21	23437627	chr21:23437627:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,24:49:255,0,255	0/1:20,22:43:255,0,255	0/1:18,20:42:255,0,255
+chr21	23439124	chr21:23439124:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,34:39:255,77,0	1/1:1,35:39:255,94,0	0/1:17,20:38:255,0,191
+chr21	23439503	chr21:23439503:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,84,0	1/1:0,45:46:255,138,0	0/1:10,21:34:255,0,182
+chr21	23441622	chr21:23441622:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,3,6:9:241,238,236,102,102,77,52,52,0,25	2/3:0,0,5,9:15:255,255,255,156,156,115,83,83,0,39	1/3:0,5,2,6:14:255,182,163,211,67,185,148,0,110,124
+chr21	23447303	chr21:23447303:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,26:52:255,0,255	0/1:26,18:45:187,0,255	1/1:2,35:38:255,75,0
+chr21	23449337	chr21:23449337:M	TATTTATTTATTT	<2.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/0:54,0:54:0,160,255	0/0:35,0:35:0,103,255	0/1:26,19:45:234,0,255
+chr21	23450276	chr21:23450276:M	ATATATATATATATATATATGTATAT	<15>,<19>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,16,9:27:255,241,201,255,0,255	1/2:0,6,1:8:198,40,22,163,0,163	2/2:0,0,2:3:62,62,62,6,6,0
+chr21	23457242	chr21:23457242:M	AAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:90,0,8	0/1:3,9:13:189,0,37	1/1:1,9:10:200,4,0
+chr21	23457561	chr21:23457561:M	TTTTTTTTTTTTTT	<13>,<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,10,0,3:15:255,124,94,255,124,255,183,0,255,255	1/3:2,22,0,6:32:255,153,115,255,184,255,255,0,255,255	2/3:1,0,12,5:19:255,255,255,160,176,140,196,255,0,255
+chr21	23469329	chr21:23469329:M	AAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:17:83,0,102	0/0:12,0:14:0,38,217	1/1:2,14:16:214,11,0
+chr21	23470007	chr21:23470007:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:17,10:28:91,0,224	0/0:25,3:28:0,28,255
+chr21	23475349	chr21:23475349:M	ATATATATATATATATATATATATATATATAT	<10>,<25>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:6:111,111,111,11,11,0	.	1/1:0,14,0:15:255,45,0,255,45,255
+chr21	23477802	chr21:23477802:M	TGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<10.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,2,33:35:255,255,255,103,65,0	1/2:0,8,12:20:255,182,158,142,0,86	2/2:0,0,24:24:255,255,255,71,71,0
+chr21	23486142	chr21:23486142:M	CAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAAAAAACCAAAACA	<9.4>	.	.	Motif=CAAAA	GT:AD:DP:PL	0/1:6,10:21:113,0,39	0/0:18,0:24:0,51,255	1/1:0,22:25:255,63,0
+chr21	23490881	chr21:23490881:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:5:106,29,20,52,0,38	1/2:0,1,4:5:81,55,52,17,0,2	1/1:0,2,0:5:80,12,0,62,12,56
+chr21	23493519	chr21:23493519:M	TTGTCTTGTCTTG	<1.6>	.	.	Motif=TTGTC	GT:AD:DP:PL	0/1:11,25:36:255,0,202	0/0:25,0:25:0,75,255	1/1:0,47:47:255,141,0
+chr21	23501439	chr21:23501439:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:26:124,0,177	0/0:24,2:27:0,34,255	1/1:0,24:26:255,73,0
+chr21	23501644	chr21:23501644:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,17:46:188,0,255	0/0:39,3:42:0,69,255	1/1:1,22:23:255,49,0
+chr21	23502144	chr21:23502144:M	TGTGTGGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGT	<27>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,11:25:151,0,111	0/0:16,0:20:0,53,255	0/1:7,6:19:75,0,90
+chr21	23509554	chr21:23509554:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<21>,<23>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,0,11,0:23:129,194,255,0,180,147,195,255,213,255	0/3:7,0,0,5:12:113,134,232,130,229,226,0,118,118,180	1/2:0,17,10,0:27:255,171,211,255,0,255,255,255,255,255
+chr21	23512654	chr21:23512654:M	ATATATATATATATATATATATATATATATATTATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,6:7:82,17,0	.	1/1:0,1:1:14,3,0
+chr21	23521581	chr21:23521581:M	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT	<12.7>,<15.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:12,5,0:17:98,0,255,135,224,255	0/2:1,0,3:4:42,53,107,0,18,6	0/1:9,6,0:16:134,0,219,165,167,255
+chr21	23536884	chr21:23536884:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:17:0,29,240	0/0:16,1:20:0,38,255	0/1:13,15:28:177,0,143
+chr21	23538512	chr21:23538512:M	AAATAAATAAAATAAATAAAT	<5.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:1,37:39:255,78,0	1/1:1,30:34:228,59,0	0/1:20,13:34:24,0,87
+chr21	23548261	chr21:23548261:M	AGAAAAAGAAAAAAAAAAAGA	<3.7>	.	.	Motif=AGAAAA	GT:AD:DP:PL	0/0:26,2:29:0,41,255	0/1:18,13:31:197,0,255	0/0:28,0:29:0,85,255
+chr21	23559406	chr21:23559406:M	AAACAAACAAACAAACAAACAAACAAACAAAAAAC	<7.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:15,10:25:120,0,217	1/1:0,28:28:255,82,0	0/0:17,0:17:0,50,255
+chr21	23559955	chr21:23559955:M	TTTTTATTTGTTTTTTTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,21:40:255,255,255,255,0,255	2/2:0,0,34:39:255,255,255,114,102,0	1/1:2,35,0:39:255,78,0,255,111,255
+chr21	23560837	chr21:23560837:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	1/1:0,3:5:130,15,0	1/1:0,0:1:12,3,0
+chr21	23561169	chr21:23561169:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28,0:29:255,67,0,255,84,255	1/1:0,26,0:26:255,76,0,255,78,255	1/2:2,14,15:31:255,238,255,221,0,255
+chr21	23565159	chr21:23565159:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:147,0,166	1/1:0,34:39:255,113,0	0/0:32,6:38:0,4,255
+chr21	23565494	chr21:23565494:M	TGTGTGTGTGTGTGTATGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,10:20:187,0,105	0/0:6,0:6:0,18,128	0/1:9,2:11:10,0,160
+chr21	23565524	chr21:23565524:M	TATATATATATATATATATATATATATATATATATATAT	<13.5>,<17.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,5,3:11:255,86,114,190,0,169	0/0:0,0,0:2:0,3,12,3,12,12	0/1:2,1,0:5:32,0,85,21,22,48
+chr21	23574675	chr21:23574675:M	TATCTATCTATCTATATCTATCTATCTATCTATCTATCTATCTATC	<12.5>,<16.5>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,8:20:255,214,178,228,0,255	0/1:10,7,0:17:77,0,132,126,180,255	0/2:9,0,8:17:188,215,255,0,167,218
+chr21	23580505	chr21:23580505:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:19:191,0,17	0/0:18,2:21:0,28,255	1/1:3,18:22:255,12,0
+chr21	23584980	chr21:23584980:M	AAAAAAAAAAAAAAGAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,5:21:29,0,222	0/1:3,9:12:120,0,16	0/1:8,8:16:95,0,95
+chr21	23595926	chr21:23595926:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,19:36:244,0,197	0/0:32,3:37:0,55,255	0/1:16,16:35:204,0,195
+chr21	23601984	chr21:23601984:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:17,3,0	0/0:8,0:9:0,26,148	0/1:2,5:7:64,0,13
+chr21	23603142	chr21:23603142:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,6:21:41,0,199	0/0:39,0:39:0,114,255	0/1:20,10:30:80,0,253
+chr21	23605499	chr21:23605499:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,23:49:255,0,255	0/0:44,0:45:0,135,255	0/1:18,16:37:255,0,255
+chr21	23610549	chr21:23610549:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<31>,<32>	.	.	Motif=T	GT:AD:DP:PL	0/2:2,3,5:13:140,28,32,0,4,20	1/2:0,5,4:13:188,48,30,34,0,17	0/2:1,0,0:8:18,14,26,0,17,17
+chr21	23611502	chr21:23611502:M	AATAATAATAATAATAATAA	<10.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:15,9:24:169,0,255	0/0:30,0:30:0,90,255	0/1:18,12:32:229,0,255
+chr21	23611935	chr21:23611935:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:50,9,0	0/1:1,1:2:10,0,10	0/0:0,0:1:0,0,0
+chr21	23619726	chr21:23619726:M	TTTATTTTATTTTATTTTATTTTATTTTTTTTTTTT	<6>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,15:18:255,53,0	0/1:4,6:11:136,0,84	0/1:5,8:16:195,0,99
+chr21	23624737	chr21:23624737:M	ATATATATATATATACACATATATATGGAGTATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,2:27:2,0,255	0/1:7,4:12:99,0,154	0/1:19,6:29:128,0,255
+chr21	23627991	chr21:23627991:M	TATATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,27:30:255,81,0	0/1:26,21:50:255,0,255	0/1:28,14:45:193,0,255
+chr21	23630930	chr21:23630930:M	TTGTTGTTGTTTTGTT	<4.7>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,23:28:255,66,0	0/1:21,18:39:106,0,140	0/1:16,11:30:70,0,108
+chr21	23634472	chr21:23634472:M	TTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,56,0	0/1:8,10:20:232,0,158	0/1:5,16:23:255,0,87
+chr21	23643392	chr21:23643392:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,42:45:255,95,0	0/1:23,23:48:255,0,255	0/1:16,23:40:255,0,186
+chr21	23651450	chr21:23651450:M	AAAAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,5:11:232,85,103,159,0,145	0/2:5,0,4:9:40,66,233,0,83,57	0/1:5,10,0:17:255,0,99,255,76,255
+chr21	23653615	chr21:23653615:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,8:17:219,135,192,109,0,151	0/1:7,8,0:18:116,0,70,159,102,255	0/2:14,1,6:21:46,87,255,0,192,199
+chr21	23653646	chr21:23653646:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,16,8:26:255,199,164,255,0,255	0/2:12,0,9:26:212,255,255,0,255,255	0/1:9,11,0:24:255,0,186,255,230,255
+chr21	23653673	chr21:23653673:M	TATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:16,13:32:230,0,255	1/1:1,22:28:255,50,0	0/1:16,9:29:144,0,255
+chr21	23655832	chr21:23655832:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,5:6:154,18,0	1/1:0,3:4:86,10,0
+chr21	23662030	chr21:23662030:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,29:46:255,0,164	0/0:43,2:47:0,102,255	0/1:21,22:44:255,0,253
+chr21	23671631	chr21:23671631:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:6:109,12,0	1/1:0,0:1:3,1,0	1/1:0,1:3:60,9,0
+chr21	23673860	chr21:23673860:M	TTTGTTTGTTTG	<3.2>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:13,13:29:49,0,63	0/1:20,19:44:68,0,102	0/0:23,0:25:0,61,222
+chr21	23675047	chr21:23675047:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:101,12,0	0/0:1,0:1:0,3,29	1/1:0,3:4:88,10,0
+chr21	23675412	chr21:23675412:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,26:54:255,0,255	0/0:50,0:51:0,150,255	0/1:23,22:45:255,0,255
+chr21	23676233	chr21:23676233:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,11:34:106,0,255	0/0:37,1:38:0,94,255	0/1:22,21:43:255,0,255
+chr21	23676759	chr21:23676759:M	AAACAAAAACAAAA	<2.5>	.	.	Motif=AAACAA	GT:AD:DP:PL	1/1:0,41:41:255,113,0	1/1:0,45:45:255,124,0	1/1:0,43:43:255,119,0
+chr21	23685841	chr21:23685841:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,18,16:34:255,255,255,255,255,204,255,255,0,243	1/2:0,31,14,0:45:255,250,118,255,0,255,255,212,255,255	3/3:0,0,0,35:35:255,255,255,255,255,255,103,105,103,0
+chr21	23689272	chr21:23689272:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:20,19:39:218,0,235	1/1:0,20:20:255,59,0
+chr21	23692049	chr21:23692049:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAA	<58>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0:11:0,32,194	0/1:3,1:4:5,0,39	0/1:1,3:4:40,0,6
+chr21	23693801	chr21:23693801:M	TTTTTTTCTTTTTTTCTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:39:0,117,255	0/1:17,16:33:255,0,255	0/0:38,0:38:0,114,255
+chr21	23697927	chr21:23697927:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:23:6,0,247	0/1:6,5:12:51,0,76	0/0:30,0:31:0,91,255
+chr21	23706889	chr21:23706889:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,27:30:255,33,0	1/1:1,32:33:255,79,0	1/1:0,38:39:255,114,0
+chr21	23722243	chr21:23722243:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:167,18,0	0/0:0,0:1:0,3,10	1/1:0,6:7:174,21,0
+chr21	23723516	chr21:23723516:M	TTTCTTTATTTCTTTTCTTTTCCTTTTTTTTTTTTCTTTCT	<10>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,21:22:255,64,0	1/1:0,24:26:255,73,0	1/1:0,22:24:255,69,0
+chr21	23729960	chr21:23729960:M	TTTTATTTTTTTATTTTTTATTTTTTATTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:14:111,0,73	0/0:16,2:18:0,17,250	1/1:0,24:25:255,64,0
+chr21	23730910	chr21:23730910:M	TTTATTTATTTATTTATTTATT	<6.5>,<7.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:9,21,0:30:255,0,87,255,173,255	0/0:33,0,0:33:0,97,255,99,255,255	1/2:0,18,25:43:255,255,255,255,0,215
+chr21	23741349	chr21:23741349:M	TTTTGTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,66,0	1/1:0,15:15:255,45,0	1/1:0,28:29:255,87,0
+chr21	23748118	chr21:23748118:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:18:255,50,0	1/1:0,17:21:255,54,0	1/1:0,23:25:255,69,0
+chr21	23754218	chr21:23754218:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,54:54:255,160,0	1/1:1,52:53:255,138,0	1/1:0,51:51:255,150,0
+chr21	23756750	chr21:23756750:M	CCCTCCCCCTCCCCC	<2.7>	.	.	Motif=CCCTCC	GT:AD:DP:PL	0/1:1,3:4:42,0,6	0/0:2,0:2:0,6,36	1/1:0,1:1:18,3,0
+chr21	23758057	chr21:23758057:M	AAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:112,12,0	1/1:0,7:8:200,23,0	.
+chr21	23758226	chr21:23758226:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:211,24,0	1/1:0,8:10:251,29,0	1/1:0,10:14:255,40,0
+chr21	23767163	chr21:23767163:M	ACACACACACACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,28:29:255,84,0	1/1:0,26:28:255,83,0
+chr21	23767798	chr21:23767798:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:8:171,23,0	1/1:0,12:15:255,44,0	1/1:0,13:16:255,45,0
+chr21	23769267	chr21:23769267:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:19:255,55,0	1/1:2,14:17:214,15,0	1/1:1,7:9:114,8,0
+chr21	23772296	chr21:23772296:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,34:36:255,69,0	1/1:0,26:27:255,70,0	1/1:0,28:29:255,85,0
+chr21	23776244	chr21:23776244:M	TTTTTTTTGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>,<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15,0:17:255,50,0,255,48,255	1/2:0,10,15:27:255,255,255,255,0,229	1/1:0,11,0:15:255,44,0,255,36,255
+chr21	23777141	chr21:23777141:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,45:49:255,106,0	0/1:21,23:46:255,0,244	1/1:1,34:36:255,87,0
+chr21	23779387	chr21:23779387:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26,1:28:255,64,0,255,64,255	1/1:0,23,0:23:255,67,0,255,67,255	1/2:0,13,8:22:255,134,82,188,0,173
+chr21	23782961	chr21:23782961:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:155,18,0	0/1:5,1:12:16,0,161	0/1:1,1:3:21,0,32
+chr21	23783661	chr21:23783661:M	ATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:3,42:45:255,76,0	0/1:23,11:34:98,0,255	1/1:1,39:40:255,99,0
+chr21	23796742	chr21:23796742:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>,<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:1,9,5:15:255,64,63,153,0,131	2/2:0,0,12:12:219,219,219,35,35,0	1/2:0,9,6:15:255,96,69,168,0,126
+chr21	23797911	chr21:23797911:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,32,0:32:255,96,0,255,96,255	1/2:0,10,5:15:255,90,105,255,0,251	1/1:0,18,0:18:255,54,0,255,54,255
+chr21	23797971	chr21:23797971:M	TTTTCTTTTTTTTCCTTTTTTCCTTTTTTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:87,15,0	0/1:4,3:7:30,0,46	1/1:1,8:9:120,9,0
+chr21	23798157	chr21:23798157:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:12:37,0,110	0/1:5,5:10:57,0,57	0/1:7,5:13:59,0,86
+chr21	23803677	chr21:23803677:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:92,17,0	1/1:0,3:4:39,2,0	0/1:2,3:5:35,0,18
+chr21	23803686	chr21:23803686:M	AAAGAAAGAAAGAAAGAAAAGAAA	<6.2>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,17:21:53,18,0	1/1:0,16:17:58,23,0	1/1:0,10:15:30,10,0
+chr21	23803777	chr21:23803777:M	TATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:3,25:30:255,40,0	0/1:4,8:12:83,0,24	1/1:0,15:16:224,43,0
+chr21	23805623	chr21:23805623:M	TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:2,36:38:255,75,0	0/1:18,10:29:92,0,241	1/1:2,29:32:255,55,0
+chr21	23806439	chr21:23806439:M	GAGAGAAAGAAAGAGAGAGAGGGAGAGAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,33:33:255,99,0	0/1:13,11:24:255,0,255	1/1:0,17:17:255,51,0
+chr21	23806476	chr21:23806476:M	GAAAGAAAGAAAGAAAAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<15>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,6:8:228,24,0	.	1/1:0,0:2:26,6,0
+chr21	23806571	chr21:23806571:M	AAGGAAGGAAGGAAGGAAGGAAGAAAACGAAGGAAGGAGGGAGGGAGAGAGGGAGGAAAAAAGAAAAAAGGAAGGAAGGAAGGAAAAGAAAGAAGGAAGG	<9>	.	.	Motif=AAGG	GT:AD:DP:PL	1/1:0,3:6:137,18,0	1/1:0,3:4:90,11,0	1/1:0,2:4:91,12,0
+chr21	23810815	chr21:23810815:M	AAAAAAAAAAAGAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:28:255,83,0	0/1:30,16:46:152,0,255	1/1:1,35:37:255,90,0
+chr21	23811329	chr21:23811329:M	GTGTTTGTGTGTGTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,20:25:255,74,0	0/1:30,16:55:255,0,255	1/1:0,34:40:255,117,0
+chr21	23814189	chr21:23814189:M	AAAAAACAAAAACAAAAACAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:37:255,88,0	0/1:24,7:33:6,0,228	1/1:0,32:36:255,90,0
+chr21	23814756	chr21:23814756:M	TATATATATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7,0:7:113,20,0,113,20,113	0/1:6,3,0:10:18,0,77,39,103,196	1/2:0,4,8:12:255,128,93,53,0,29
+chr21	23818534	chr21:23818534:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,1:17:0,32,255	0/0:18,0:18:0,53,255	0/1:12,5:17:38,0,161
+chr21	23818713	chr21:23818713:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:5:47,0,3	0/0:4,0:4:0,12,65	0/0:4,0:6:0,14,77
+chr21	23822338	chr21:23822338:M	AAAAAAAAACAAAAAACAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:32,0:32:0,94,255	0/1:13,12:25:150,0,168
+chr21	23823025	chr21:23823025:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,17:31:232,0,175	0/0:37,0:38:0,111,255	1/1:0,31:32:255,94,0
+chr21	23824022	chr21:23824022:M	TTTTATTTTCTTTTTCTTTTTTCTTTTTTCTTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:18:255,54,0	0/1:16,6:27:124,0,255	1/1:0,23:25:255,74,0
+chr21	23827547	chr21:23827547:M	TATGTGTGTATGTTTGTGTGTCTGTGTGTGTGTATGTAT	<10.2>	.	.	Motif=TATG	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:3,8:11:124,0,26	1/1:0,18:18:255,53,0
+chr21	23827583	chr21:23827583:M	TATATATATATATATATATAATATTTATAT	<18>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,20:23:255,47,0	0/1:5,3:9:50,0,112	1/1:0,14:15:255,34,0
+chr21	23830140	chr21:23830140:M	TTATTTATTTATTTATTTATTTA	<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,33:34:255,101,0	0/1:14,4:19:49,0,255	1/1:0,25:27:255,78,0
+chr21	23832333	chr21:23832333:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,36:42:255,83,0	0/1:17,20:39:255,0,183	1/1:0,28:30:255,85,0
+chr21	23836148	chr21:23836148:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,57,0	0/1:8,11:22:243,0,163	1/1:0,21:26:255,71,0
+chr21	23837002	chr21:23837002:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:49,0,48	0/0:14,1:18:0,31,236	0/0:11,0:11:0,32,192
+chr21	23837167	chr21:23837167:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:144,11,0	0/1:10,9:20:106,0,114	1/1:2,12:15:186,8,0
+chr21	23839400	chr21:23839400:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:17:198,4,0	0/1:15,7:23:63,0,192	1/1:1,22:23:255,50,0
+chr21	23846125	chr21:23846125:M	TGTTTTGTTTTTTTTGTTTT	<4.2>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:15,11:26:180,0,255	0/1:18,13:31:211,0,255	0/1:13,14:28:245,0,226
+chr21	23853857	chr21:23853857:M	AGAGAGAGAGAAAATGAGAGAGGGAGAGAGAGAGAGAGAGAGGAGAGAAGAGA	<25.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,20:22:255,64,0	0/1:13,15:28:187,0,151	1/1:0,14:14:255,41,0
+chr21	23858405	chr21:23858405:M	AAAAGAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:16:255,47,0	0/1:1,4:6:54,0,11	1/1:0,10:10:184,29,0
+chr21	23858427	chr21:23858427:M	ACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6:6:176,18,0	0/0:0,0:2:0,5,27	1/1:0,3:4:108,12,0
+chr21	23858457	chr21:23858457:M	ATATATATATATATATATATATATATATATATATATATATATATATATA	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,12:14:255,42,0	1/1:0,2:4:54,6,0	1/1:0,4:5:120,14,0
+chr21	23859435	chr21:23859435:M	ATTATAATTATATAAAATTATATATTTATAATTATA	<2>	.	.	Motif=ATTATA	GT:AD:DP:PL	0/1:4,3:7:83,0,85	0/0:0,0:1:0,0,0	.
+chr21	23860662	chr21:23860662:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,28,0:29:255,84,0,255,86,255	1/2:0,17,12:29:255,207,255,255,0,255	1/1:0,21,0:22:255,65,0,255,66,255
+chr21	23864699	chr21:23864699:M	ACACACACACACACACACACACACACACACACACACACACACAC	<20>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,14:24:151,181,255,0,156,88	0/1:10,11,2:25:231,0,214,139,133,235	0/2:5,1,10:17:119,112,241,0,71,41
+chr21	23865257	chr21:23865257:M	TATATATATATATATATA	<6>,<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:19,13,3:35:255,0,255,255,216,255	1/2:4,13,18:37:255,186,255,255,0,236	0/0:30,0,3:33:0,98,255,53,255,255
+chr21	23874464	chr21:23874464:M	AAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:10:66,0,114	1/1:0,4:6:128,15,0	0/0:11,0:11:0,33,255
+chr21	23891093	chr21:23891093:M	ATATATAAATATATATATATATATATATATATATATATATATATATATATATATATATAT	<16>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,18:22:255,57,0	1/1:0,7:8:209,24,0	.
+chr21	23892751	chr21:23892751:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>,<17>,<18>	.	.	Motif=ATT	GT:AD:DP:PL	1/2:0,6,9,0:15:255,169,233,165,0,140,255,169,167,255	1/1:0,7,0,0:7:210,21,0,213,21,218,213,21,218,218	2/3:0,0,7,3:10:191,212,255,55,56,26,109,129,0,100
+chr21	23896888	chr21:23896888:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTATCTATTTAACTATCTATCTA	<17.5>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:2,5:7:75,0,18	1/1:0,10:10:180,29,0	0/0:14,0:14:0,41,255
+chr21	23903804	chr21:23903804:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2,0:5:18,0,35,33,49,125	0/1:4,3,0:7:27,0,43,47,63,171	0/2:8,0,3:12:50,68,174,0,119,185
+chr21	23904757	chr21:23904757:M	TTTTTATTTTTATTTTTATTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:17:83,0,128	1/1:0,18:19:255,55,0	0/0:23,0:23:0,68,255
+chr21	23906360	chr21:23906360:M	TTATTTTATTTTATTTTATTTTATT	<6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:23,8:31:63,0,255	1/1:0,24:24:255,71,0	0/0:27,0:27:0,80,255
+chr21	23914137	chr21:23914137:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:8,0,25	.	1/1:0,4:4:67,12,0
+chr21	23919663	chr21:23919663:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:2,33:36:255,71,0	1/1:1,42:43:255,109,0
+chr21	23922844	chr21:23922844:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:27:255,58,0	1/1:2,27:31:255,53,0	1/1:0,32:34:255,99,0
+chr21	23924291	chr21:23924291:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:17,15:32:195,0,235	1/1:0,32:32:255,94,0	0/0:37,0:37:0,109,255
+chr21	23927858	chr21:23927858:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,93	1/1:0,6:6:106,18,0	0/1:9,2:11:4,0,130
+chr21	23948909	chr21:23948909:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:70,12,0	0/1:1,4:5:52,0,2	1/1:0,3:4:40,0,0
+chr21	23966637	chr21:23966637:M	CCCCCCCCCCCC	<13>	.	.	Motif=C	GT:AD:DP:PL	0/1:6,5:12:54,0,81	0/0:7,0:7:0,20,118	0/1:5,5:10:58,0,58
+chr21	23985888	chr21:23985888:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/0:27,2:30:0,51,255	0/1:14,13:32:150,0,186
+chr21	24006315	chr21:24006315:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,16,1,5:22:255,98,100,255,71,255,255,0,255,255	1/3:0,12,0,5:17:255,84,102,255,84,255,255,0,255,255	2/3:0,0,11,6:19:255,255,255,89,105,50,210,211,0,161
+chr21	24014707	chr21:24014707:M	TTGTTGTTGGGTTGTTGTTGTTGTTGTTTTGT	<9.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:12,20:32:255,0,123	0/1:20,23:43:255,0,249
+chr21	24018554	chr21:24018554:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:18,13:34:131,0,244	0/1:23,14:38:144,0,255
+chr21	24018856	chr21:24018856:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:26:0,77,255	0/1:16,8:26:153,0,255	0/1:15,10:28:199,0,255
+chr21	24034195	chr21:24034195:M	AACAACAACAA	<2.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:52,0:55:0,107,255	0/1:28,17:46:195,0,255	0/1:22,20:43:255,0,255
+chr21	24034667	chr21:24034667:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,81,255	0/1:28,26:54:255,0,255	0/1:13,30:43:255,0,116
+chr21	24034856	chr21:24034856:M	AATAAATAAATAAATAAATAA	<4.2>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/1:18,20:38:252,0,215	0/1:20,23:43:255,0,250
+chr21	24036151	chr21:24036151:M	AGACAAAGACAAAGA	<1.5>	.	.	Motif=AGACAA	GT:AD:DP:PL	0/0:32,0:35:0,81,255	0/1:19,17:38:205,0,242	0/1:17,18:37:248,0,206
+chr21	24042337	chr21:24042337:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,10:14:249,151,139,71,0,31	0/2:2,1,6:10:86,69,124,0,24,15	0/2:10,3,5:18:68,22,255,0,123,126
+chr21	24043471	chr21:24043471:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:14,14:31:172,0,162	0/1:14,19:35:255,0,149
+chr21	24045498	chr21:24045498:M	AAAAAAAAAAAAAAAAAA	<15>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19,0:21:255,62,0,255,62,255	0/1:5,10,0:19:251,0,123,255,109,255	1/2:0,11,6:19:255,103,122,255,0,255
+chr21	24047697	chr21:24047697:M	AAGAAAAAAAAAAAAAAGAAAAAGAAAAGAAA	<6.6>	.	.	Motif=AAGAA	GT:AD:DP:PL	0/1:6,10:17:161,0,82	0/0:8,1:10:0,8,153	0/1:11,6:18:73,0,184
+chr21	24049400	chr21:24049400:M	TATTTATTTATTTATTTATTTATTTA	<7.5>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:25,9:34:73,0,255	0/0:38,0:38:0,112,255	0/1:11,12:23:157,0,139
+chr21	24051269	chr21:24051269:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,13:25:164,0,146	1/1:2,18:23:255,29,0	0/1:15,10:26:103,0,201
+chr21	24051901	chr21:24051901:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,15:21:209,0,11	1/1:0,23:24:255,70,0	0/1:2,12:17:160,0,19
+chr21	24055340	chr21:24055340:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:25:111,0,194	1/1:2,27:31:255,53,0	0/0:24,0:27:0,78,255
+chr21	24055350	chr21:24055350:M	AACAACAACAAAAACAAACAAC	<5.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:4,1:5:8,0,88	0/1:28,2:37:27,0,255	1/1:1,12:14:255,16,0
+chr21	24061789	chr21:24061789:M	TTTTTCTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,20:38:255,0,225	1/1:2,28:34:255,63,0	0/1:19,17:36:203,0,241
+chr21	24076811	chr21:24076811:M	AGAGAGAGAGAGAGAGGAAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:11,16:29:255,0,211	0/0:22,0:23:0,69,255	0/1:18,11:31:217,0,255
+chr21	24081073	chr21:24081073:M	ATAACATAACA	<1.2>	.	.	Motif=ATAAC	GT:AD:DP:PL	0/1:17,24:41:255,0,211	0/0:22,0:22:0,65,255	0/1:24,29:53:255,0,255
+chr21	24093400	chr21:24093400:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21,1:41:255,0,240,255,255,255	0/0:38,0,0:40:0,117,255,120,255,255	0/2:19,6,11:38:224,105,255,0,255,255
+chr21	24096907	chr21:24096907:M	TCTCTCTCTCTCTCTCTCTCTCTCTC	<18>,<20>,<21>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,6,0:10:211,204,198,21,21,0,141,139,21,122	1/2:0,11,12,2:27:255,255,255,255,0,250,255,172,255,255	3/3:0,0,1,8:11:255,255,255,147,147,121,27,27,9,0
+chr21	24109572	chr21:24109572:M	TTTTTTTTTTTTTTTTT	<14>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,12,2,13:28:255,240,255,255,203,255,255,0,195,255	3/3:1,0,1,20:22:255,255,255,255,255,255,47,63,47,0	1/2:0,16,19,0:36:255,255,234,255,0,192,255,255,255,255
+chr21	24113576	chr21:24113576:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGA	<23>	.	.	Motif=AG	GT:AD:DP:PL	0/0:8,0:11:0,24,143	0/1:9,3:12:16,0,118	0/1:8,2:14:14,0,108
+chr21	24119044	chr21:24119044:M	TGTGTGTGTGTCTGTGTGTGTGTGTGTCTGTGTGTGCGTGCCTCTGTGTGTGTGTGTGTGTGTGT	<31.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:9,1:10:0,11,150	0/0:9,0:9:0,26,159	0/1:6,6:13:81,0,71
+chr21	24122103	chr21:24122103:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,11:31:121,0,242	0/0:34,4:41:0,49,255	0/1:18,18:41:232,0,224
+chr21	24126833	chr21:24126833:M	AAAAAAAAAAAAAAAGAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:23:255,0,178	0/0:26,1:30:0,56,255	0/1:10,10:20:205,0,210
+chr21	24129417	chr21:24129417:M	ACACACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,9:20:187,0,230	0/0:17,0:20:0,59,255	0/1:10,14:26:255,0,201
+chr21	24142240	chr21:24142240:M	AAAAAAAAAAAAACAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,26:30:255,37,0	1/1:1,27:29:255,68,0	1/1:0,33:36:255,101,0
+chr21	24157799	chr21:24157799:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:31,1:32:0,76,255	0/1:17,17:35:191,0,180	0/0:40,0:41:0,120,255
+chr21	24173632	chr21:24173632:M	AGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGACAGATAGATAGATAGGTATAGATAGAT	<11.2>,<18.5>,<19.5>,<20.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/2:0,5,5,0,4:14:204,93,126,83,0,103,140,28,82,126,149,26,30,96,130	1/4:0,1,0,0,5:6:79,66,130,92,119,137,79,66,92,79,26,0,27,26,12	1/3:0,2,2,4,0:10:187,120,119,100,27,83,74,0,46,56,147,74,89,73,133
+chr21	24175695	chr21:24175695:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,18:49:203,0,255	0/0:43,2:47:0,102,255	0/1:15,16:32:209,0,179
+chr21	24186995	chr21:24186995:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:14:0,23,212	0/1:8,9:19:105,0,89	0/0:18,2:22:0,9,255
+chr21	24203912	chr21:24203912:M	ACACACACACACACACACACACACACACA	<15.5>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:2,16,17:35:255,248,183,190,0,189	1/2:1,11,8:20:255,111,70,130,0,130	1/1:2,27,0:29:255,52,0,255,84,255
+chr21	24206789	chr21:24206789:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,0,3:8:207,78,61,136,50,114,128,0,84,119	1/2:0,5,6,1:13:255,105,72,83,0,56,213,66,74,202	3/3:0,0,0,4:5:135,132,129,92,92,80,15,15,14,0
+chr21	24210498	chr21:24210498:M	AAAACAAAACAAAACA	<4.4>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:22,18:40:255,0,255	0/1:22,22:44:255,0,255	0/0:53,0:53:0,159,255
+chr21	24214629	chr21:24214629:M	GAAAGAGATAAAGAGAAAGAAAGAGAAGGAGGGAGAGAGAAAGAGAAAG	<7.7>	.	.	Motif=GAAAGA	GT:AD:DP:PL	0/0:10,0:15:0,25,95	0/1:6,9:17:49,0,19	0/0:15,0:21:0,37,142
+chr21	24218390	chr21:24218390:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:7:32,0,50	1/1:0,3:3:50,9,0	0/1:2,2:5:29,0,20
+chr21	24222719	chr21:24222719:M	ACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,31:31:255,91,0	1/1:0,30:30:255,89,0
+chr21	24226730	chr21:24226730:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,0:52:0,152,255	0/1:28,23:53:255,0,255	0/1:21,19:40:232,0,255
+chr21	24229201	chr21:24229201:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:251,0,196	0/1:24,11:37:105,0,255	0/0:43,1:44:0,112,255
+chr21	24230523	chr21:24230523:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,14:22:199,0,63	0/1:13,14:27:162,0,145	1/1:0,18:19:255,55,0
+chr21	24235523	chr21:24235523:M	TATATATATATATATACTATATATGTATATATATATAT	<21>,<24>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,17,11:30:255,255,255,255,0,255	0/1:5,5,0:11:109,0,125,131,144,255	0/2:12,0,2:17:55,87,255,0,255,255
+chr21	24237613	chr21:24237613:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9,2:17:209,0,126,130,77,194	0/2:8,1,6:15:70,71,255,0,121,96	0/1:4,5,0:10:126,0,84,96,70,142
+chr21	24246457	chr21:24246457:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,18:21:255,25,0	0/1:11,4:15:25,0,146	1/1:2,17:19:255,20,0
+chr21	24250212	chr21:24250212:M	TGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:4,0,6:10:141,102,190,0,102,82	0/1:2,9,0:11:230,0,25,146,50,170	0/2:7,1,9:20:213,138,255,0,174,152
+chr21	24253627	chr21:24253627:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,1:48:0,123,255	0/1:20,17:37:195,0,248	0/0:59,0:59:0,174,255
+chr21	24257979	chr21:24257979:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/2:2,11,11:24:255,167,255,167,0,253	1/2:1,15,23:41:255,255,255,249,0,255	1/2:0,19,17:37:255,255,255,255,0,255
+chr21	24267083	chr21:24267083:M	AAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,26:26:255,78,0	.
+chr21	24271463	chr21:24271463:M	AGATAAATAGGTAGATAGATGATTGATTGATTGATAGATGGATAGATAGATAGATGATAGACAGATGATAGA	<20>	.	.	Motif=AGAT	GT:AD:DP:PL	0/1:4,2:6:33,0,84	0/0:13,0:13:0,39,255	0/1:8,5:14:85,0,166
+chr21	24273612	chr21:24273612:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:14:233,41,0	0/1:7,3:11:28,0,84	1/1:0,15:17:255,49,0
+chr21	24274643	chr21:24274643:M	TTTTTTTTTTTCTCTTTTTTGTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,0:17:0,41,255	0/1:11,6:19:114,0,243	0/0:11,0:13:0,29,255
+chr21	24277609	chr21:24277609:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,11:35:100,0,255	0/1:15,19:36:242,0,152	0/1:13,14:29:172,0,154
+chr21	24280683	chr21:24280683:M	TATATATATATATATATATATATAT	<13.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,15,12:29:255,193,131,206,0,197	0/2:1,1,2:4:50,19,25,0,3,20	1/1:1,6,0:9:89,4,0,72,2,93
+chr21	24287743	chr21:24287743:M	ATAATAATAATAATAATAATAATAAT	<6.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:12,4:18:38,0,211	1/1:0,8:10:170,24,0	0/0:18,1:19:0,35,255
+chr21	24287767	chr21:24287767:M	ATCATCATCATCATCATCAT	<9.7>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,29:33:255,98,0	1/1:0,27:28:255,83,0	1/1:0,32:37:255,108,0
+chr21	24292912	chr21:24292912:M	TGTTTTTGTTTTTTTTTT	<3.2>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/0:16,0:16:0,48,255	0/1:18,17:35:250,0,255	0/0:13,0:13:0,39,255
+chr21	24295450	chr21:24295450:M	AAAAAAACAAAAACAAAAACAAAACAAAACAAAAAAAA	<39>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:12:0,28,171	0/1:16,6:24:43,0,213	0/0:14,0:16:0,34,236
+chr21	24296135	chr21:24296135:M	TTTTTTCTTTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,15:19:227,9,0	1/1:0,13:16:182,12,0	1/1:0,9:13:154,15,0
+chr21	24302678	chr21:24302678:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,26,0:28:255,77,0,255,79,255	1/2:4,8,8:21:173,80,185,90,0,198	1/2:2,13,11:26:255,166,254,202,0,255
+chr21	24307116	chr21:24307116:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19:34:255,0,164	0/1:30,25:56:255,0,255	0/1:25,14:40:140,0,255
+chr21	24307538	chr21:24307538:M	TTTTTCTTTTTTTTTTTTTTTTTTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,0:3:16,20,36,0,14,9	1/1:0,3,0:4:49,9,0,56,8,82	2/2:0,0,4:6:90,102,141,17,18,0
+chr21	24310402	chr21:24310402:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,20,13:34:255,225,255,255,0,255	1/2:0,29,9:38:255,157,151,255,0,255	1/2:0,22,15:37:255,255,255,255,0,255
+chr21	24314168	chr21:24314168:M	AAATAAATAAATAAATAAATAAATAAATAAATAAAT	<8>,<10>	.	.	Motif=AAAT	GT:AD:DP:PL	0/2:7,0,9:16:132,178,255,0,117,89	1/2:0,7,7:14:217,127,186,129,0,208	0/2:9,0,10:20:134,191,255,0,148,118
+chr21	24315345	chr21:24315345:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:132,15,0	1/1:0,3:4:98,12,0	0/1:1,5:10:166,0,2
+chr21	24316096	chr21:24316096:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8,0:11:243,8,0,249,27,255	1/2:0,1,3:9:96,51,84,51,0,50	0/1:0,0,0:3:3,0,16,10,19,29
+chr21	24320424	chr21:24320424:M	AATAAATAAATAAATAAA	<3.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:22,20:42:244,0,255	1/1:0,41:41:255,121,0
+chr21	24322175	chr21:24322175:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,0,14:34:168,255,255,0,255,255	1/2:0,25,21:46:255,255,255,255,0,255	0/2:21,1,24:46:255,255,255,0,255,255
+chr21	24325234	chr21:24325234:M	ATATATATATATATATATATATATATATATATAT	<20.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,3:5:66,0,18	0/0:1,0:2:0,6,51	0/0:0,0:1:0,2,5
+chr21	24327928	chr21:24327928:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,25:29:255,46,0	1/1:1,38:41:255,102,0	1/1:0,23:25:255,73,0
+chr21	24341060	chr21:24341060:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:30:255,83,0	1/1:0,44:48:255,135,0	1/1:0,28:32:255,89,0
+chr21	24342272	chr21:24342272:M	ATCTATCTATCTATCTATGTATCTATCTATCAACTGTCTATCATCTGTCTATTTATCATCTATCTATCT	<18.2>	.	.	Motif=ATCT	GT:AD:DP:PL	1/1:0,9:10:141,26,0	1/1:0,8:9:121,23,0	1/1:0,19:21:255,55,0
+chr21	24349210	chr21:24349210:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:52,0,80	0/1:2,8:10:104,0,4	0/1:3,3:8:29,0,47
+chr21	24350862	chr21:24350862:M	AAAGAAAGAAA	<1.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,59:59:255,174,0	1/1:0,49:49:255,145,0
+chr21	24357842	chr21:24357842:M	TATATATATATATATGTATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:26,20:46:250,0,255	1/1:0,36:36:255,106,0	0/0:47,2:49:0,107,255
+chr21	24361597	chr21:24361597:M	TTTTTGTTTGTTTTTTTTTTGTTGTTTTTTGTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:30,1:31:0,73,255	0/1:17,12:29:132,0,223
+chr21	24367103	chr21:24367103:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,5:5:131,15,0
+chr21	24373121	chr21:24373121:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:29:89,0,248	1/1:4,28:35:255,35,0	0/1:17,16:36:178,0,201
+chr21	24374789	chr21:24374789:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,100,0	1/1:2,44:47:255,103,0	1/1:2,49:51:255,114,0
+chr21	24379399	chr21:24379399:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:7:83,0,43	0/1:1,6:8:140,0,4	0/1:5,6:12:120,0,101
+chr21	24379660	chr21:24379660:M	TTATTATTATTATTATTATTATT	<8.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:17,21:38:255,0,216	1/1:0,21:21:255,62,0	0/1:12,19:31:255,0,134
+chr21	24382599	chr21:24382599:M	AAAAATAAAAAAAAAAAAAAA	<18>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,11,4,8:25:255,141,168,245,75,201,255,0,135,255	1/2:0,19,11,0:32:255,175,88,255,0,215,255,145,255,255	2/3:1,0,19,13:36:255,255,255,160,218,127,255,254,0,214
+chr21	24383530	chr21:24383530:M	ATATATATATATATATATATATA	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:13,0:19:0,42,255	1/1:0,0:2:0,0,0	0/1:10,6:16:118,0,229
+chr21	24383556	chr21:24383556:M	AGAGAGAGAGAGA	<8.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:17,0:17:0,51,255	.	0/1:12,4:16:50,0,255
+chr21	24383571	chr21:24383571:M	ATATATATATACAGATATATATATATATATATACAGATATATATATACAGATATATATATATATATATA	<35.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:4:47,11,0	.	0/1:3,1:4:1,0,24
+chr21	24387454	chr21:24387454:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,12,0,5:18:255,157,123,255,142,255,208,0,255,255	2/3:1,0,10,4:17:255,255,255,99,114,74,154,255,0,255	1/1:0,30,0,0:31:255,91,0,255,93,255,255,93,255,255
+chr21	24391572	chr21:24391572:M	ATATATATAGTTATTTATAACATATAATATATATTTATAATATATATTATAT	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,3:13:43,0,222	0/1:2,3:5:67,0,37	0/1:5,5:10:107,0,100
+chr21	24402019	chr21:24402019:M	AAAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,7:23:58,0,211	1/1:1,11:15:179,16,0	0/0:21,1:22:0,47,255
+chr21	24412839	chr21:24412839:M	ATATGTATATATATGTATATATATATATATATACATATATATAT	<24>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,10:16:255,0,124	0/1:0,0:1:0,0,0	0/0:8,0:10:0,24,232
+chr21	24434397	chr21:24434397:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,2:13:19,0,255	0/0:19,0:25:0,74,255	0/1:10,5:19:92,0,246
+chr21	24480365	chr21:24480365:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:23:0,48,255	0/0:34,3:40:0,64,255	0/1:13,13:27:155,0,167
+chr21	24483526	chr21:24483526:M	AAAATAAAATAAAATAAAATAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<13>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:8,10:18:142,0,103	0/1:1,1:2:12,0,12	1/1:0,5:7:115,20,0
+chr21	24492847	chr21:24492847:M	TCTCTCTCTCTCTCTCTCTCCCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:29,0:30:0,87,255	0/0:46,1:47:0,116,255	0/1:16,20:36:255,0,255
+chr21	24492880	chr21:24492880:M	TGTTTTTTTTGTTGTTTTGATTTGTTTTGTTTTGTTTT	<7.8>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:35,0:35:0,104,255	0/1:13,7:20:93,0,228
+chr21	24501023	chr21:24501023:M	ACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	<9.2>,<10.2>	.	.	Motif=ACAAA	GT:AD:DP:PL	0/2:8,0,11:19:255,211,255,0,153,179	0/1:10,12,0:23:152,0,127,185,189,255	2/2:0,0,20:20:255,255,255,60,59,0
+chr21	24505690	chr21:24505690:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:25:0,58,255	0/0:20,0:25:0,46,255	0/1:16,19:40:255,0,255
+chr21	24508486	chr21:24508486:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:25:0,70,255	0/0:32,0:36:0,101,255	0/1:16,7:27:54,0,227
+chr21	24518180	chr21:24518180:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:97,12,0	1/1:0,5:8:181,23,0	1/1:0,7:7:203,21,0
+chr21	24519399	chr21:24519399:M	TCTCTCTCTCCCTTTCTCTGTCTCTCTCTCTCTCTCTC	<18>,<20>	.	.	Motif=TC	GT:AD:DP:PL	0/2:17,0,12:30:70,141,255,0,161,138	0/2:16,1,8:25:30,86,255,0,144,140	1/2:0,8,21:29:255,255,255,93,0,100
+chr21	24519436	chr21:24519436:M	CACACACACACACACAAACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/1:22,24:47:255,0,255	0/1:18,14:33:255,0,255	1/1:0,31:34:255,101,0
+chr21	24521573	chr21:24521573:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAA	<33>,<35>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:12:88,100,201,0,120,165	0/2:12,1,7:23:144,159,255,0,197,255	1/2:1,11,2:15:198,41,22,171,0,255
+chr21	24526323	chr21:24526323:M	TTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,3:5:124,62,50,18,0,4	1/2:0,2,0:3:71,10,3,34,0,26	1/2:0,5,2:7:206,35,15,87,0,67
+chr21	24527024	chr21:24527024:M	TTTTCTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7,0:15:82,0,100,106,142,255	0/2:6,0,9:17:207,158,227,0,108,130	1/1:1,12,0:13:193,21,0,196,38,221
+chr21	24530150	chr21:24530150:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,14:23:186,0,96	0/1:16,8:28:68,0,225	0/0:34,0:38:0,110,255
+chr21	24533391	chr21:24533391:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,9:22:255,218,195,194,0,255	1/2:1,9,8:18:255,191,174,134,0,216	0/1:20,12,0:33:114,0,255,208,255,255
+chr21	24543216	chr21:24543216:M	TGTGTGTGTGTGTGTGTGTGTG	<12>,<16>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,15,17:34:255,255,255,255,0,255	1/2:0,14,10:26:255,255,239,245,0,255	0/1:24,12,0:37:112,0,255,219,255,255
+chr21	24545569	chr21:24545569:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,27,12:39:255,217,224,255,0,255	1/2:2,13,17:33:255,255,255,204,0,255	0/1:26,25,0:53:255,0,255,255,255,255
+chr21	24551703	chr21:24551703:M	TTTTCTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:13:0,30,171	1/1:0,6:11:127,24,0	0/1:9,3:13:14,0,130
+chr21	24563122	chr21:24563122:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:30:255,70,0	1/1:1,45:46:255,117,0	1/1:1,42:44:255,111,0
+chr21	24566744	chr21:24566744:M	TATATATATATATATATATATATATATA	<16>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:12:227,33,0	0/1:1,1:3:15,0,15	0/1:1,3:7:51,0,9
+chr21	24572962	chr21:24572962:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:40:218,0,255	0/1:24,16:42:159,0,255	0/0:41,0:44:0,128,255
+chr21	24580128	chr21:24580128:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:6:119,51,66,76,0,67	0/1:3,7,0:11:166,0,66,178,58,228	2/2:0,0,2:2:34,40,59,6,6,0
+chr21	24584325	chr21:24584325:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:17:7,0,179	0/1:4,7:13:91,0,40	0/0:22,0:24:0,69,255
+chr21	24586155	chr21:24586155:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTT	<29>,<30>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,7:15:255,134,94,106,0,83	2/2:0,0,6:8:199,143,125,24,23,0	1/2:1,4,4:9:145,53,45,42,0,55
+chr21	24586339	chr21:24586339:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,5:9:74,0,28	1/1:2,13:18:221,17,0	0/0:10,0:10:0,29,177
+chr21	24592409	chr21:24592409:M	TTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:5:72,9,0	1/1:0,3:4:104,12,0	.
+chr21	24593600	chr21:24593600:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,6:6:165,18,0	0/1:8,9:17:198,0,175
+chr21	24599889	chr21:24599889:M	TTTTATTTTTAT	<2.3>	.	.	Motif=TTTTAT	GT:AD:DP:PL	1/1:0,46:46:255,138,0	1/1:0,39:39:255,117,0	0/1:15,20:35:255,0,255
+chr21	24601238	chr21:24601238:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,1:16:0,29,249	0/0:19,1:23:0,49,255	0/1:14,9:25:97,0,174
+chr21	24616356	chr21:24616356:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0:30:255,90,0,255,90,255	1/1:0,47,0:49:255,147,0,255,147,255	1/2:0,26,13:39:255,255,255,255,0,255
+chr21	24617888	chr21:24617888:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,5:47:0,46,255	0/0:40,2:42:0,88,255	0/1:36,31:69:255,0,255
+chr21	24618983	chr21:24618983:M	TTTTTGTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:89,15,0	1/1:1,8:10:117,9,0	0/1:6,6:16:62,0,87
+chr21	24621663	chr21:24621663:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,22:27:255,24,0	1/1:2,21:23:255,33,0	0/1:17,8:28:61,0,250
+chr21	24622313	chr21:24622313:M	AAAAAAAAAAAGAAAAAAAGAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:0,29:30:255,88,0	0/1:13,11:24:130,0,167
+chr21	24624600	chr21:24624600:M	AACAAACAAACAAACAAACAAACAAACAAA	<8.5>	.	.	Motif=AACA	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,30:30:255,88,0	0/1:14,13:27:169,0,184
+chr21	24627642	chr21:24627642:M	ATAAATACATAAGTAAATAAATAA	<6.2>	.	.	Motif=ATAA	GT:AD:DP:PL	1/1:6,26:32:227,18,0	1/1:5,24:30:210,17,0	0/1:26,13:39:42,0,191
+chr21	24627670	chr21:24627670:M	GTGTGTGTGTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,34:34:255,102,0	0/1:21,23:45:255,0,255
+chr21	24630988	chr21:24630988:M	TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,38:39:255,114,0	0/1:11,21:32:255,0,110
+chr21	24633370	chr21:24633370:M	TGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,9:21:255,104,47,109,0,82	1/2:1,7,5:13:143,45,22,51,0,55	0/2:11,1,3:15:25,22,107,0,113,201
+chr21	24634911	chr21:24634911:M	TAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	<10.2>,<11.2>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/2:4,0,5:10:69,69,165,0,62,50	0/2:3,0,3:7:37,33,104,0,41,36	1/2:0,7,4:11:243,63,42,129,0,99
+chr21	24636570	chr21:24636570:M	TATATATATATATATATATATATATAT	<7.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,23:24:255,255,255,72,72,0	2/2:0,0,4:4:116,116,116,12,12,0	1/2:0,8,5:15:255,133,116,200,0,188
+chr21	24636638	chr21:24636638:M	TATATATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,34:35:255,98,0	1/1:0,12:13:169,36,0	0/1:17,8:28:67,0,146
+chr21	24636656	chr21:24636656:M	TTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,5,27:34:255,255,249,99,11,0	2/2:0,0,9:11:255,119,87,31,8,0	1/1:0,20,4:30:255,86,0,255,33,255
+chr21	24641986	chr21:24641986:M	TTTGTTTCTGTTTTTGTTTTTTTTTT	<4.5>	.	.	Motif=TTTGTT	GT:AD:DP:PL	0/0:35,2:38:0,76,255	0/1:7,13:21:171,0,60	0/0:22,0:22:0,64,255
+chr21	24644109	chr21:24644109:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,3:4:39,0,5	1/1:0,1:2:28,6,0
+chr21	24645907	chr21:24645907:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:17:255,51,0	1/1:0,11:15:255,36,0	1/1:1,15:17:255,21,0
+chr21	24656275	chr21:24656275:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:15:202,7,0	0/1:2,7:13:124,0,15	1/1:2,11:14:174,5,0
+chr21	24660566	chr21:24660566:M	TTAATTAAATTAATTGATTAATTA	<5>	.	.	Motif=TTAA	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,37:38:255,112,0	1/1:0,37:37:255,109,0
+chr21	24663567	chr21:24663567:M	TTTTCTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:12:255,35,0	1/1:0,9:12:255,31,0	1/1:0,3:3:89,9,0
+chr21	24667453	chr21:24667453:M	ATATATATATATATATAAAATATATATAT	<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,23:23:255,69,0	1/1:0,8:8:210,24,0	1/1:0,17:17:255,51,0
+chr21	24667499	chr21:24667499:M	ATATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,14:14:255,42,0	1/1:0,19:21:255,60,0
+chr21	24669541	chr21:24669541:M	CTCTCTCTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:1,40:41:255,103,0	1/1:0,34:36:255,105,0
+chr21	24680590	chr21:24680590:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:32:255,56,0	1/1:1,43:45:255,114,0	1/1:0,34:34:255,100,0
+chr21	24681669	chr21:24681669:M	CACACACACACAC	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,41:42:255,105,0	1/1:1,29:30:255,70,0	1/1:0,29:29:255,86,0
+chr21	24682960	chr21:24682960:M	ACACACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39:41:255,122,0	1/1:0,36:36:255,108,0	1/1:0,48:48:255,144,0
+chr21	24686391	chr21:24686391:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:47:255,138,0	1/1:2,52:56:255,128,0	1/1:0,42:43:255,126,0
+chr21	24688236	chr21:24688236:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,44:47:255,101,0	0/1:20,21:42:255,0,231	0/1:15,28:44:255,0,145
+chr21	24690435	chr21:24690435:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAA	<39>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4,0:5:52,0,2,55,16,79	0/1:4,6,0:11:64,0,43,78,72,182	0/2:2,1,3:6:63,34,50,0,18,39
+chr21	24696204	chr21:24696204:M	TGTGTGTATGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,18:30:255,0,138	0/0:20,0:22:0,62,255	1/1:0,19:23:255,68,0
+chr21	24696241	chr21:24696241:M	ACACACACACACACACACATACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,10:24:175,0,250	0/0:22,0:22:0,66,255	1/1:0,17:17:255,51,0
+chr21	24698516	chr21:24698516:M	AAAAAAATAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,255	0/0:43,0:43:0,129,255	1/1:0,52:55:255,164,0
+chr21	24701845	chr21:24701845:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,1:36:0,88,255	0/1:14,21:36:255,0,143	0/0:46,1:47:0,120,255
+chr21	24715815	chr21:24715815:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:12:119,0,45	0/0:0,0:1:0,3,19	1/1:0,6:10:206,23,0
+chr21	24715854	chr21:24715854:M	AGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,9:28:139,0,255	0/0:26,0:26:0,78,255	1/1:0,15:17:255,37,0
+chr21	24718412	chr21:24718412:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,11:27:180,0,255	0/1:16,16:36:255,0,255	1/1:2,26:34:255,37,0
+chr21	24727598	chr21:24727598:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,22:42:255,0,244	0/0:30,0:32:0,93,255	0/1:23,19:44:212,0,255
+chr21	24729171	chr21:24729171:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0,0:37:0,109,255,111,255,255	0/2:16,2,18:38:255,255,255,0,255,255	0/1:26,24,1:51:255,0,255,255,255,255
+chr21	24736981	chr21:24736981:M	GTGGGGTGGGG	<2.4>	.	.	Motif=GTGGG	GT:AD:DP:PL	0/1:3,14:17:255,0,18	0/0:16,0:16:0,48,255	0/1:11,15:26:255,0,174
+chr21	24738324	chr21:24738324:M	AAAAAAAAATAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,14:37:150,0,255	0/1:14,12:26:133,0,168	1/1:0,21:22:255,64,0
+chr21	24741148	chr21:24741148:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>,<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,10,5,0,0:28:255,0,255,63,237,255,255,162,221,255,255,255,255,255,255	0/4:11,0,0,1,5:18:83,130,255,130,255,255,57,195,192,143,0,253,229,120,208	2/3:4,9,12,20,1:46:255,241,255,207,255,255,255,37,0,255,255,255,255,255,255
+chr21	24741192	chr21:24741192:M	ATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:20,23:46:255,0,255	0/0:24,0:24:0,72,255	0/1:27,24:52:255,0,255
+chr21	24741202	chr21:24741202:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/1:10,12:22:249,0,177	0/1:31,21:52:255,0,255
+chr21	24748702	chr21:24748702:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,7:23:124,0,255	0/0:28,0:29:0,87,255	0/1:20,15:38:255,0,255
+chr21	24765824	chr21:24765824:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,13:28:255,243,168,219,0,178	0/1:14,12,0:28:129,0,185,177,255,255	0/2:13,0,8:21:165,141,255,0,230,255
+chr21	24767358	chr21:24767358:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:251,0,255	0/1:17,22:39:255,0,255	0/0:32,0:33:0,99,255
+chr21	24767403	chr21:24767403:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:197,15,0	0/1:0,1:2:39,0,7	1/1:0,1:1:32,3,0
+chr21	24774242	chr21:24774242:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,22:50:255,0,255	0/0:43,0:46:0,134,255	0/1:20,27:50:255,0,223
+chr21	24781970	chr21:24781970:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:31:96,0,180	0/1:15,14:31:135,0,128	0/0:30,1:32:0,75,255
+chr21	24784350	chr21:24784350:M	ATATATATATATATATATAT	<9>,<11>	.	.	Motif=AT	GT:AD:DP:PL	1/2:2,14,16:34:255,255,255,245,0,255	0/1:16,17,0:36:218,0,187,255,242,255	0/2:16,0,14:31:181,255,255,0,251,207
+chr21	24791984	chr21:24791984:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTG	<22.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,5,0:13:52,0,100,76,134,255	0/1:13,9,0:22:90,0,159,129,220,255	0/2:14,2,11:29:240,161,255,0,230,255
+chr21	24797961	chr21:24797961:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:14:73,0,162	0/1:11,8:24:161,0,255	0/0:24,0:24:0,72,255
+chr21	24799402	chr21:24799402:M	AAAAAAAAAAAAAAAAAAA	<17>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18,0:22:255,62,0,255,65,255	1/2:0,4,6:11:187,107,157,99,0,82	1/2:2,24,8:39:255,106,166,255,0,255
+chr21	24802225	chr21:24802225:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGT	<16>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,29:29:255,87,0	0/1:14,16:30:255,0,255	0/1:20,17:41:255,0,255
+chr21	24806111	chr21:24806111:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:0,33:33:255,97,0	0/0:19,0:20:0,59,255
+chr21	24807935	chr21:24807935:M	ATATTATATATATATATATGTAAATATATATATA	<18>,<19>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,12,18:31:255,255,253,175,0,147	0/2:6,1,7:14:159,108,177,0,90,132	0/1:10,13,0:23:174,0,118,204,183,255
+chr21	24811882	chr21:24811882:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:22:94,0,146	0/1:12,10:24:104,0,147	0/0:20,0:20:0,59,255
+chr21	24828390	chr21:24828390:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,8:20:168,0,224	0/1:7,6:15:136,0,153	1/1:1,15:22:255,21,0
+chr21	24832630	chr21:24832630:M	ACACACACACACACACAC	<10>	.	.	Motif=AC	GT:AD:DP:PL	0/1:27,18:46:202,0,255	0/0:42,0:44:0,129,255	0/1:29,22:52:255,0,255
+chr21	24835684	chr21:24835684:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,9:28:187,0,255	0/0:20,0:27:0,63,255	0/1:17,8:28:146,0,255
+chr21	24836423	chr21:24836423:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,29:47:255,0,202	0/1:14,14:29:165,0,174	0/1:13,24:37:255,0,131
+chr21	24838266	chr21:24838266:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,22:24:255,255,255,65,58,0	1/2:0,12,12:27:255,211,255,255,0,255	0/2:11,0,10:26:134,201,255,0,210,142
+chr21	24841845	chr21:24841845:M	TTTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:29:0,82,255	0/1:24,9:33:59,0,255	0/0:29,0:29:0,85,255
+chr21	24847015	chr21:24847015:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:30:211,0,155	0/1:24,17:43:186,0,255	1/1:0,27:29:255,85,0
+chr21	24855453	chr21:24855453:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2:39:0,78,255	0/1:20,14:36:145,0,255	0/1:11,21:32:255,0,106
+chr21	24859691	chr21:24859691:M	ATATATATATATATATATA	<7.5>,<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:19,17,1:37:255,0,255,255,255,255	0/2:9,0,19:28:255,255,255,0,159,79	1/2:0,18,19:37:255,255,247,255,0,228
+chr21	24870562	chr21:24870562:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,14:34:155,0,255	0/1:12,13:28:144,0,156	1/1:1,28:35:255,80,0
+chr21	24878687	chr21:24878687:M	TTTGTTTTGTTTGTGGTGTTTTTCTTTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	<10>	.	.	Motif=TTTGT	GT:AD:DP:PL	1/1:0,2:3:61,9,0	1/1:0,6:8:169,24,0	1/1:0,3:3:68,9,0
+chr21	24879776	chr21:24879776:M	TATTTTTTTATGTGTATTTATTTATATTTATTT	<7>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:18,8:26:125,0,255	0/0:8,0:8:0,24,214	0/1:10,9:19:173,0,210
+chr21	24879820	chr21:24879820:M	TATATATATTTTTATATATGTTTATATATATTTTATATATTTATATATACGTATATATATATACGTATATATATATATATATATATACACATATATATA	<27.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,1:1:23,3,0	.	1/1:0,3:3:69,9,0
+chr21	24889901	chr21:24889901:M	ATATATATATATATGTGTGTGTATATATATATATATATAT	<18>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,14:29:255,0,255	0/1:5,13:18:255,0,80	1/1:0,34:34:255,102,0
+chr21	24899193	chr21:24899193:M	GAGAGAGAGAGAGAGAGAGAGACGGAAAGAGAGAGAGAGAGACAGACAGAGAGACAGACAGACAGAGAGACAGACAGAGAGA	<5.5>	.	.	Motif=GAGA	GT:AD:DP:PL	0/1:2,4:10:92,0,38	0/1:3,1:9:15,0,71	0/0:4,0:11:0,15,122
+chr21	24905907	chr21:24905907:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3,2:12:20,0,114,18,71,144	0/2:6,1,2:11:17,19,116,0,62,85	2/2:1,0,6:7:89,108,173,3,18,0
+chr21	24917569	chr21:24917569:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:30:0,69,255	0/1:18,17:35:204,0,221	0/1:25,25:50:255,0,255
+chr21	24922191	chr21:24922191:M	ATATATATGGTATATATCATATATATAT	<15>	.	.	Motif=AT	GT:AD:DP:PL	0/1:14,3:17:8,0,220	0/0:15,0:15:0,44,255	0/1:17,6:23:45,0,251
+chr21	24922373	chr21:24922373:M	TTTTTTTTCTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,2,10:24:255,255,255,0,159,255	0/1:5,7,0:14:82,0,59,119,94,255	1/2:0,11,2:17:250,94,73,183,0,255
+chr21	24928678	chr21:24928678:M	TTTTTTTTATTTTTTTTATTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:0,28:28:255,82,0	1/1:1,33:34:255,82,0
+chr21	24934629	chr21:24934629:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:30:119,0,235	1/1:1,17:21:255,34,0	0/1:10,14:24:175,0,105
+chr21	24937333	chr21:24937333:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:36,0,19	1/1:1,7:8:97,7,0	1/1:0,5:5:83,15,0
+chr21	24940527	chr21:24940527:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:2:52,6,0	.	1/1:0,3:3:91,9,0
+chr21	24941147	chr21:24941147:M	TAAAAATAAAAA	<2.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/1:21,30:52:255,0,158	0/1:29,17:47:122,0,255	0/0:41,0:42:0,112,255
+chr21	24943428	chr21:24943428:M	TTTTTTTTTTTTCTTTTTTTTTTTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3,0:6:47,0,18,61,30,114	0/2:2,0,3:5:36,50,106,0,28,19	1/2:0,6,3:10:139,61,68,103,0,144
+chr21	24946296	chr21:24946296:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:79,14,0	0/1:1,3:5:51,0,2	1/1:0,3:3:51,9,0
+chr21	24952227	chr21:24952227:M	TTCTTGTTCTTGTTTTGTT	<3.7>	.	.	Motif=TTCTTG	GT:AD:DP:PL	0/1:22,16:38:255,0,255	0/0:44,0:45:0,133,255	0/1:27,14:41:253,0,255
+chr21	24955214	chr21:24955214:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,10:18:132,0,61	0/1:10,4:16:23,0,134	0/1:6,12:19:154,0,50
+chr21	24957091	chr21:24957091:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,17:22:255,50,0	1/1:0,4:6:82,14,0	1/1:0,6:7:108,18,0
+chr21	24958748	chr21:24958748:M	AAAAAAGAAAAAAAAAAAAAAAAACAAAGAAAAGAAAA	<37>,<39>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,8:15:165,122,189,64,0,90	2/2:1,0,9:13:166,195,255,21,35,0	1/2:0,4,5:10:136,83,111,76,0,97
+chr21	24969519	chr21:24969519:M	ACACACACGCAGACACACACACACACATCTAAACACACACACACACACAC	<26>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,9:18:117,0,116	1/1:0,24:24:255,71,0	0/1:11,10:22:119,0,146
+chr21	24974689	chr21:24974689:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,5:28:9,0,255	1/1:0,16:17:255,49,0	0/1:11,6:19:68,0,135
+chr21	24981549	chr21:24981549:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,10:27:255,162,106,201,0,194	1/2:0,18,8:27:255,141,66,248,0,221	1/2:2,13,18:35:255,255,211,142,0,149
+chr21	24987372	chr21:24987372:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:27:238,0,255	0/0:19,0:23:0,62,255	0/1:11,5:19:87,0,251
+chr21	24990644	chr21:24990644:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:20:255,40,0	0/1:18,10:30:97,0,221	0/1:11,14:30:185,0,119
+chr21	24991240	chr21:24991240:M	AAAAAAAAAAAACGAAAAAAGAAAAGAGAAAGAAAAAAAAAGAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:136,0,154	1/1:0,28:29:255,85,0	0/0:16,1:17:0,32,255
+chr21	24997456	chr21:24997456:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,20:24:255,54,0	1/1:0,8:10:91,15,0	1/1:0,21:26:255,59,0
+chr21	25004368	chr21:25004368:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/1:13,18:31:245,0,151	1/1:0,24:24:255,70,0	0/0:30,0:30:0,88,255
+chr21	25010479	chr21:25010479:M	ACACACACACATACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:37,0:38:0,111,255	0/1:20,18:40:255,0,255	0/0:51,0:51:0,153,255
+chr21	25010667	chr21:25010667:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,5:46:0,43,255	0/0:32,2:36:0,67,255	0/1:25,21:49:255,0,255
+chr21	25018811	chr21:25018811:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,50:52:255,134,0	1/1:4,58:63:255,114,0	0/1:20,20:41:244,0,254
+chr21	25021697	chr21:25021697:M	GTTTGTTTGTTTGTTTGTTT	<6>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:33,0:33:0,97,255	0/1:24,24:48:255,0,255
+chr21	25022199	chr21:25022199:M	GGGGGGGGGGGGG	<10>,<12>	.	.	Motif=G	GT:AD:DP:PL	2/2:0,0,3:5:75,67,89,14,9,0	2/2:0,0,3:5:76,65,87,14,9,0	1/2:0,4,4:9:179,72,92,109,0,93
+chr21	25023583	chr21:25023583:M	ATTTATTTATTTATT	<4.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:47,0:47:0,139,255	0/0:53,0:53:0,156,255	0/1:23,23:46:255,0,255
+chr21	25027856	chr21:25027856:M	ACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:18,20:38:247,0,206	0/0:57,0:57:0,168,255
+chr21	25029138	chr21:25029138:M	TATATATATATATATATATATATATATATATATATATAT	<15.5>,<16.5>,<20.5>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,14,4:18:255,255,255,66,110,69,255,231,0,255	2/2:0,0,1,0:1:31,19,16,3,3,0,31,19,3,31	1/3:0,6,0,3:9:207,49,64,146,82,163,167,0,97,158
+chr21	25030087	chr21:25030087:M	TTCCTTCCTTCCTTCTTTCCTTTCTTCCTTCCTCCCTCCCTCCCTCCTTCTTCCTTCCTTCCTTGCTTCCTTCCTTTTTTCCTTCCTTC	<2.8>,<18.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:2,3,6:12:169,103,145,22,0,51	0/2:2,1,2:7:77,59,106,0,26,38	0/2:3,1,5:11:141,126,199,0,51,54
+chr21	25040379	chr21:25040379:M	AAAAAAAAAATAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/0:43,0:44:0,129,255	0/1:16,20:36:255,0,190
+chr21	25040543	chr21:25040543:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,23,0:28:255,0,8,255,89,255	1/1:2,25,0:27:255,45,0,255,79,255	1/2:0,20,10:30:255,174,89,255,0,255
+chr21	25052192	chr21:25052192:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:22,0,16	0/1:1,4:5:50,0,2	0/1:3,4:10:50,0,35
+chr21	25061130	chr21:25061130:M	TTATTTTTTATTTATTTATTTATTTATTTATTTATTTATTT	<13.2>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,8:8:223,24,0	1/1:0,2:2:56,6,0	0/1:9,6:15:122,0,205
+chr21	25061461	chr21:25061461:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,22:25:255,38,0	1/1:0,20:24:255,68,0	0/1:8,16:25:212,0,64
+chr21	25063956	chr21:25063956:M	CACACACACACACACACACACACACACACACACACA	<15>,<16>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,19,23:42:255,255,255,255,0,225	1/1:0,26,1:29:255,86,0,255,67,255	0/2:6,0,21:28:255,255,255,0,148,92
+chr21	25070637	chr21:25070637:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,24:27:255,43,0	1/1:2,21:26:255,38,0	0/1:14,15:30:186,0,159
+chr21	25096779	chr21:25096779:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,13:23:182,0,74	0/1:3,6:12:90,0,18	0/1:4,12:19:172,0,25
+chr21	25096945	chr21:25096945:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:31:0,69,255	0/1:15,11:27:110,0,189	0/0:30,1:31:0,74,255
+chr21	25102864	chr21:25102864:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:29:255,84,0	1/1:0,29:31:255,87,0	0/1:21,22:43:255,0,255
+chr21	25130137	chr21:25130137:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,31:33:255,61,0	1/1:1,31:34:255,82,0	0/1:15,20:36:253,0,171
+chr21	25138954	chr21:25138954:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,12:18:173,0,17	1/1:1,10:11:147,16,0	0/0:9,0:10:0,29,164
+chr21	25144016	chr21:25144016:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:13:94,0,42	0/1:1,4:5:53,0,2	0/0:7,0:7:0,21,121
+chr21	25145300	chr21:25145300:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:21:131,0,255	1/1:0,8:11:231,21,0	0/0:24,0:26:0,78,255
+chr21	25152194	chr21:25152194:M	TATATAAATATATATAAATTATATATAAATTTATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,4:30:34,0,255	0/1:4,3:7:68,0,83	0/1:17,5:26:85,0,255
+chr21	25158458	chr21:25158458:M	GAAGGAAGGAAGG	<2.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:11,15:26:220,0,136	0/0:22,0:22:0,65,255	0/1:18,17:35:222,0,236
+chr21	25162327	chr21:25162327:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,44:44:255,129,0	0/1:24,25:49:255,0,255
+chr21	25170469	chr21:25170469:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,9:19:104,0,122	0/1:10,6:17:60,0,120	0/0:18,1:22:0,46,255
+chr21	25174547	chr21:25174547:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,4:10:99,41,59,26,0,24	1/2:1,8,3:14:255,26,22,137,0,118	2/2:0,0,4:6:67,68,69,10,12,0
+chr21	25179952	chr21:25179952:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,19:38:243,0,233	1/1:0,40:41:255,120,0	0/0:41,3:45:0,77,255
+chr21	25180903	chr21:25180903:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,23:49:255,0,255	1/1:4,44:51:255,78,0	0/0:49,2:52:0,116,255
+chr21	25181034	chr21:25181034:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,19:48:222,0,255	0/0:43,2:45:0,96,255	0/1:30,23:54:255,0,255
+chr21	25181846	chr21:25181846:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<7.5>,<8>,<12.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/2:0,11,8,0:19:255,220,185,255,0,255,255,220,255,255	2/2:0,0,18,0:18:255,255,255,54,54,0,255,255,54,255	1/3:0,12,0,4:16:255,75,77,255,113,255,255,0,255,255
+chr21	25183010	chr21:25183010:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>,<21>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,15,11,0:29:255,255,255,255,0,255,255,255,255,255	2/3:0,0,10,7:18:255,255,255,191,191,153,255,255,0,241	0/1:20,14,0,0:36:255,0,255,255,255,255,255,255,255,255
+chr21	25186124	chr21:25186124:M	AAAAAAAAGAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/0:42,0:43:0,124,255	0/1:21,27:48:255,0,248
+chr21	25186446	chr21:25186446:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:117,0,63	0/0:9,0:11:0,32,174	0/1:3,4:9:54,0,37
+chr21	25187519	chr21:25187519:M	TGTTTTTTTTTTTGTTTGTTT	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:53,0:55:0,157,255	0/0:31,0:31:0,93,255	0/1:22,15:37:225,0,255
+chr21	25190702	chr21:25190702:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:91,12,0	1/1:0,0:1:14,3,0	0/1:6,4:10:79,0,140
+chr21	25194404	chr21:25194404:M	ACACATACAGACACACACACACACACACACACACACACACACA	<17.5>,<25.5>,<27.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,16,0,5:21:255,133,85,255,131,255,255,0,255,255	2/3:0,0,12,12:26:255,255,255,255,255,255,255,255,0,255	0/1:11,17,0,0:29:255,0,255,255,255,255,255,255,255,255
+chr21	25195902	chr21:25195902:M	TTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTT	<33>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,7,6:15:209,69,63,69,0,101	0/1:8,6,0:15:57,0,103,84,143,255	0/2:5,1,4:11:81,53,119,0,77,120
+chr21	25196771	chr21:25196771:M	TATATATATAGGATATATATA	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,20:34:255,0,151	1/1:0,15:16:255,46,0	0/0:52,0:52:0,154,255
+chr21	25198324	chr21:25198324:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,22:40:255,0,220	1/1:1,27:29:255,67,0	0/0:32,0:32:0,94,255
+chr21	25203356	chr21:25203356:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,22:27:255,24,0	1/1:4,20:25:255,4,0	0/1:10,7:17:76,0,129
+chr21	25210329	chr21:25210329:M	TTTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTT	<33>,<35>,<36>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,4,9,0:23:56,65,232,0,42,104,95,182,162,255	0/3:11,0,1,6:19:96,141,255,62,173,152,0,139,125,216	1/2:1,10,15,0:28:234,177,255,113,0,174,255,192,240,255
+chr21	25214217	chr21:25214217:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:25,0,8	1/1:0,7:8:113,20,0	0/1:6,5:12:59,0,65
+chr21	25223513	chr21:25223513:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,1:4:6,15,94,0,52,40	2/2:0,0,8:10:137,113,108,25,4,0	1/2:2,3,3:9:83,9,56,17,0,28
+chr21	25228145	chr21:25228145:M	ATATATATATATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,5:21:160,0,86	1/1:0,3:5:104,12,0	0/0:5,0:8:0,23,183
+chr21	25228176	chr21:25228176:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:8,2,5:17:106,34,191,0,169,202	1/2:0,1,1:2:43,12,6,11,0,6	0/1:2,7,0:9:125,0,16,77,38,104
+chr21	25232074	chr21:25232074:M	AAAAAAGAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,126,0	1/1:0,37:37:255,111,0	1/1:0,48:50:255,144,0
+chr21	25237376	chr21:25237376:M	AATAGTAATAGT	<2.7>	.	.	Motif=AATAGT	GT:AD:DP:PL	0/1:10,18:28:255,0,195	1/1:0,34:34:255,102,0	0/0:32,0:32:0,96,255
+chr21	25242694	chr21:25242694:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:0,33:35:255,102,0	0/1:21,6:30:41,0,255
+chr21	25244413	chr21:25244413:M	GTGTGTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,38:38:255,112,0	0/1:18,24:43:255,0,212
+chr21	25247870	chr21:25247870:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,1,13:30:148,215,255,0,224,211	0/0:24,2,1:27:0,45,255,61,255,255	1/2:0,13,8:22:255,148,187,226,0,255
+chr21	25259483	chr21:25259483:M	ATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATAGATAATAGATAGATA	<17.2>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:6,2:9:20,0,86	1/1:1,14:15:230,27,0	0/1:5,10:15:139,0,47
+chr21	25259585	chr21:25259585:M	ATGATGATGATGATGATGATGA	<6.3>	.	.	Motif=ATG	GT:AD:DP:PL	1/1:0,47:47:255,139,0	1/1:0,41:41:255,121,0	1/1:0,42:42:255,124,0
+chr21	25266888	chr21:25266888:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:20:255,41,0	1/1:3,17:21:242,11,0	1/1:0,19:20:255,58,0
+chr21	25269904	chr21:25269904:M	AAAAAGAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:27:55,0,255	0/1:8,7:18:77,0,104	0/1:4,11:19:150,0,37
+chr21	25280880	chr21:25280880:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGT	<17>,<19>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,18,17:37:255,255,255,255,0,255	1/2:0,24,5:30:255,88,57,255,0,255	0/2:12,0,16:28:203,255,255,0,212,132
+chr21	25303267	chr21:25303267:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,5:7:71,0,16	1/1:1,11:14:193,23,0	0/1:15,5:21:28,0,223
+chr21	25309386	chr21:25309386:M	ACAACAACAACAACAACAA	<7.7>	.	.	Motif=ACA	GT:AD:DP:PL	1/1:0,54:54:255,162,0	1/1:0,31:31:255,93,0	0/1:29,20:49:255,0,255
+chr21	25310083	chr21:25310083:M	ATATATATATATGTGTGTATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,5:5:61,14,0	1/1:0,2:2:24,5,0	1/1:0,6:6:73,17,0
+chr21	25317688	chr21:25317688:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,54:54:255,159,0	0/1:26,20:47:232,0,255
+chr21	25318545	chr21:25318545:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,58:58:255,174,0	1/1:0,47:48:255,144,0	0/1:22,27:51:255,0,255
+chr21	25328125	chr21:25328125:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:16:93,0,93	0/1:6,8:15:99,0,57	0/0:19,0:22:0,53,255
+chr21	25328639	chr21:25328639:M	ATATTAATATTAATTTATGTTAATTATTAATAT	<3>	.	.	Motif=ATATTA	GT:AD:DP:PL	0/1:30,12:42:192,0,255	0/1:30,6:38:52,0,255	0/1:41,7:49:43,0,255
+chr21	25330156	chr21:25330156:M	ATTATTATCATTATTATTAATTATTAT	<8>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,25:25:255,74,0	0/1:23,25:48:255,0,255
+chr21	25330181	chr21:25330181:M	ATGATAATGATA	<1.5>	.	.	Motif=ATGATA	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,38:38:255,114,0	0/1:30,30:60:255,0,255
+chr21	25332291	chr21:25332291:M	ATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:2,16,13:33:255,255,255,255,0,255	1/2:0,9,2:11:183,50,24,157,0,236	0/2:12,0,3:15:43,78,255,0,215,255
+chr21	25349188	chr21:25349188:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,2,0:22:4,0,255,61,255,255	0/1:3,5,0:10:100,0,76,115,64,181	0/2:16,0,8:28:123,195,255,0,255,230
+chr21	25351944	chr21:25351944:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,20:46:233,0,255	0/1:21,20:43:225,0,242	0/0:43,3:46:0,82,255
+chr21	25352085	chr21:25352085:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,23:39:255,0,172	0/1:19,18:39:210,0,229	0/0:38,0:39:0,112,255
+chr21	25368279	chr21:25368279:M	AAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:6:118,51,35,44,0,35	2/2:0,1,5:7:147,93,76,18,4,0	0/2:10,2,2:15:26,12,142,0,139,240
+chr21	25399853	chr21:25399853:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:13:83,0,67	0/1:9,3:14:10,0,129	0/1:4,6:11:79,0,37
+chr21	25420159	chr21:25420159:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,111,0	1/1:0,31:35:255,99,0	1/1:0,33:37:255,102,0
+chr21	25427328	chr21:25427328:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/1:28,17:45:172,0,255	0/0:55,2:57:0,131,255
+chr21	25431540	chr21:25431540:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,22:50:255,0,255	0/1:25,19:46:222,0,255	0/0:37,1:39:0,96,255
+chr21	25439922	chr21:25439922:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:33:161,0,244	0/1:18,13:33:150,0,218	0/0:37,1:41:0,101,255
+chr21	25449117	chr21:25449117:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,7:23:255,89,70,238,0,196	1/2:2,11,3:17:255,10,25,161,0,151	1/1:0,27,1:30:255,86,0,255,70,255
+chr21	25452012	chr21:25452012:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,21,7:31:255,124,129,255,0,255	1/2:0,11,12:23:255,203,255,255,0,255	2/2:1,0,29:31:255,255,255,73,92,0
+chr21	25453066	chr21:25453066:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,4:5:55,58,83,0,17,3	2/2:0,0,3:3:50,50,50,9,9,0	1/2:2,3,4:9:93,23,63,17,0,25
+chr21	25477440	chr21:25477440:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:161,0,179	0/0:37,1:39:0,97,255	0/1:16,20:37:255,0,180
+chr21	25496834	chr21:25496834:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,19:21:255,25,0	0/1:16,15:33:165,0,195	1/1:1,17:19:255,38,0
+chr21	25510247	chr21:25510247:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:19:199,0,9	0/1:5,3:9:24,0,69	1/1:2,8:14:131,2,0
+chr21	25511959	chr21:25511959:M	ATATATATATATATATATATA	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:22,2:26:0,36,255	0/0:12,0:13:0,38,250	0/1:12,7:19:85,0,185
+chr21	25514771	chr21:25514771:M	ATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGA	<11.2>,<13.2>	.	.	Motif=ATGG	GT:AD:DP:PL	1/2:1,11,9:21:255,152,202,190,0,255	1/1:0,33,0:33:255,97,0,255,99,255	2/2:0,0,22:22:255,255,255,65,66,0
+chr21	25524688	chr21:25524688:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,49:51:255,131,0	0/1:8,13:23:183,0,74	1/1:1,27:31:255,72,0
+chr21	25534823	chr21:25534823:M	ACACACACACACACACACACACACACACACACACA	<9.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,7:22:137,184,255,0,255,255	1/2:0,15,8:30:255,194,137,255,0,255	0/0:18,0,0:30:0,85,255,17,255,255
+chr21	25535422	chr21:25535422:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:26:0,41,255	0/1:11,5:20:36,0,137	0/0:25,3:28:0,31,255
+chr21	25540122	chr21:25540122:M	AATAATAATAATAATAATAA	<5.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:40,0:42:0,102,255	0/1:16,13:30:160,0,203	0/0:45,1:48:0,101,255
+chr21	25547348	chr21:25547348:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<24>,<27>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11,0:14:208,40,0,240,41,255	0/2:2,1,4:12:109,84,109,0,7,64	1/1:2,9,0:13:132,6,0,164,38,255
+chr21	25552832	chr21:25552832:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/0:33,4:38:0,41,255	0/1:17,15:35:189,0,214
+chr21	25559376	chr21:25559376:M	TTTTTTTTTTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:12:0,33,255	0/1:4,3:7:59,0,86	0/0:5,0:6:0,17,141
+chr21	25562048	chr21:25562048:M	GGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/1:7,3:12:19,0,92	0/0:20,0:21:0,58,255
+chr21	25566946	chr21:25566946:M	TCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:16,25:42:255,0,165	0/0:34,0:34:0,100,255
+chr21	25572109	chr21:25572109:M	ATATATATATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:14,2:19:0,17,57	0/1:6,8:17:7,0,15	0/0:19,0:20:0,35,95
+chr21	25572130	chr21:25572130:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12,0:29:255,0,235,139,255,255	1/2:0,4,5:13:255,73,37,76,0,47	0/0:21,0,0:24:0,50,255,66,255,255
+chr21	25573530	chr21:25573530:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	0/1:22,21:45:254,0,255	1/1:0,34:34:255,100,0
+chr21	25575777	chr21:25575777:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,67,0	0/1:11,13:25:164,0,118	1/1:1,32:35:255,82,0
+chr21	25576486	chr21:25576486:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<11>,<12>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,14,0:27:255,233,153,214,0,135,255,233,214,255	1/3:0,15,0,22:39:255,255,255,255,255,255,255,0,237,255	2/2:0,0,38,0:38:255,255,255,114,111,0,255,255,114,255
+chr21	25577031	chr21:25577031:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,53:55:255,143,0	1/1:0,55:56:255,164,0	1/1:0,36:38:255,111,0
+chr21	25577094	chr21:25577094:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,52:56:255,127,0	1/1:0,35:35:255,103,0	1/1:1,36:38:255,87,0
+chr21	25581342	chr21:25581342:M	CTTTCTTTCTTTCTTT	<1.5>,<1.8>	.	.	Motif=CTTT	GT:AD:DP:PL	2/2:0,0,3:7:165,46,26,21,0,0	1/2:0,0,0:5:83,25,12,19,0,5	1/1:0,3,0:5:124,14,0,41,4,26
+chr21	25581355	chr21:25581355:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:50,9,0	1/1:0,2:3:45,9,0	0/1:1,1:3:21,0,8
+chr21	25581993	chr21:25581993:M	TATATATATATATCTTATATATATACACTATTATATATATA	<21>,<22>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,3,4:12:72,44,37,2,0,33	1/1:0,2,0:3:6,3,0,10,4,22	1/2:1,1,4:6:46,39,34,0,0,9
+chr21	25582033	chr21:25582033:M	ACACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:18,0:21:0,62,255	0/1:5,3:11:38,0,97	0/0:13,0:16:0,47,255
+chr21	25584863	chr21:25584863:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,10:20:125,0,125	0/1:9,18:31:249,0,73	0/0:23,3:30:0,18,255
+chr21	25588312	chr21:25588312:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,91,0	0/1:21,17:39:188,0,255	1/1:0,47:48:255,141,0
+chr21	25589422	chr21:25589422:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:23:255,63,0	1/1:0,37:40:255,111,0	1/1:0,32:35:255,96,0
+chr21	25591080	chr21:25591080:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:39:255,116,0	1/1:0,13:14:255,42,0	1/1:0,40:41:255,123,0
+chr21	25594250	chr21:25594250:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,4:12:222,52,31,108,0,78	0/2:0,0,1:4:4,13,47,0,30,24	1/1:0,9,0:10:255,30,0,177,29,152
+chr21	25596675	chr21:25596675:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,48:50:255,149,0	0/1:25,23:51:255,0,255	1/1:0,54:55:255,162,0
+chr21	25598857	chr21:25598857:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24,0:30:255,78,0,255,86,255	1/2:2,15,10:31:255,146,239,255,0,255	1/1:0,28,0:32:255,95,0,255,95,255
+chr21	25600396	chr21:25600396:M	AAAAAAAAAAAAAAAAAAAAAA	<23>,<26>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,1:4:56,55,54,9,9,0	1/1:0,4,0:4:66,12,0,78,12,118	2/2:0,0,5:5:141,141,141,15,15,0
+chr21	25600576	chr21:25600576:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:24:255,72,0	0/1:14,9:28:174,0,255	1/1:0,23:24:255,69,0
+chr21	25611041	chr21:25611041:M	AAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,91,255	0/1:21,15:38:161,0,255	0/0:30,1:33:0,78,255
+chr21	25612118	chr21:25612118:M	TATATATATATATACGTATATATATACGTATATATA	<12>,<19>	.	.	Motif=TA	GT:AD:DP:PL	0/2:12,0,8:20:97,155,255,0,231,175	0/1:10,20,1:31:255,0,227,255,162,255	2/2:0,0,16:21:255,255,255,47,48,0
+chr21	25613552	chr21:25613552:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,23,0:39:255,0,159,255,255,255	0/2:8,2,11:21:250,250,255,0,103,187	1/1:0,31,0:34:255,97,0,255,99,255
+chr21	25614426	chr21:25614426:M	AAAAAAAAAAAAAAAACAAAAACAAAAAACAAACAAACAAAAAAAAACAAAGAAAAAAAGAAAAAAGAAAAGAAAAAGAAAAAA	<78>,<79>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:57,41,36,6,6,0	1/1:0,6,0:6:178,18,0,119,18,103	2/2:0,0,4:5:126,90,78,14,14,0
+chr21	25615130	chr21:25615130:M	CTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16>,<17>,<23>	.	.	Motif=CT	GT:AD:DP:PL	1/2:0,13,10,0:24:255,190,118,255,0,190,255,190,255,255	2/3:0,1,17,15:33:255,255,255,255,255,255,255,255,0,255	1/1:0,24,0,0:27:255,80,0,255,78,255,255,80,255,255
+chr21	25625815	chr21:25625815:M	AATAATAATAATAAT	<4>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,3:3:58,9,0	.	.
+chr21	25631295	chr21:25631295:M	TCTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTT	<4.8>	.	.	Motif=TCTTTT	GT:AD:DP:PL	1/1:0,23:24:255,70,0	0/1:4,7:11:94,0,40	1/1:0,13:14:248,40,0
+chr21	25633261	chr21:25633261:M	AAAAAAAAAAGAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:36:0,69,255	0/1:24,20:44:222,0,255	0/0:37,0:37:0,109,255
+chr21	25633939	chr21:25633939:M	AAAAAAAAAAAAAAA	<17>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,1,4:5:133,133,132,69,69,56,18,18,0,3	1/1:1,10,1,0:15:255,8,0,242,10,255,255,29,255,255	2/3:0,0,7,4:11:255,255,255,69,69,37,120,119,0,88
+chr21	25640796	chr21:25640796:M	CTTTCTCTTTCTTCTTTCTTTCTCTCTCTCTTTCT	<6.5>	.	.	Motif=CTTTCT	GT:AD:DP:PL	1/1:0,12:19:165,34,0	0/0:11,0:17:0,31,152	1/1:0,21:25:255,59,0
+chr21	25641596	chr21:25641596:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	0/1:23,18:42:201,0,255	1/1:0,39:39:255,115,0
+chr21	25644867	chr21:25644867:M	TTTGTTTGTTTGTTTGTTTGTTTGTTT	<5.8>,<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,31,0:31:255,92,0,255,93,255	1/2:0,19,15:34:255,255,255,255,0,255	1/1:0,36,0:36:255,106,0,255,108,255
+chr21	25648444	chr21:25648444:M	GTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:10,13:26:255,0,212	0/0:30,0:32:0,95,255
+chr21	25651062	chr21:25651062:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,3,3:10:31,7,54,18,0,71	0/1:4,0,1:8:6,0,42,11,28,55	1/2:1,1,2:5:26,15,38,13,0,30
+chr21	25655915	chr21:25655915:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,1:49:0,126,255	0/1:27,21:50:225,0,255	0/0:36,3:40:0,62,255
+chr21	25659255	chr21:25659255:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,25:36:255,0,61	0/1:21,17:39:187,0,255	1/1:0,34:35:255,102,0
+chr21	25660760	chr21:25660760:M	ATATATATATATATATATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,5:11:75,0,93	.	0/1:5,3:12:29,0,141
+chr21	25669372	chr21:25669372:M	AAAAAAAAGAAAAAAAAGAAAAAAAGAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/1:7,16:23:255,0,125	0/0:31,0:31:0,93,255
+chr21	25680769	chr21:25680769:M	TGGATGGATGGATGGATGGATGGATGACGATCGATGGATGGATGGATGGATGG	<12.2>	.	.	Motif=TGGA	GT:AD:DP:PL	0/1:12,15:27:205,0,151	0/0:16,0:16:0,47,255	1/1:0,25:26:255,76,0
+chr21	25685525	chr21:25685525:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0,0:3:0,9,85,9,60,52	0/2:3,0,4:7:46,55,127,0,49,29	1/2:1,3,3:8:104,26,38,42,0,39
+chr21	25686445	chr21:25686445:M	TATGTGTATGTGT	<1.8>	.	.	Motif=TATGTG	GT:AD:DP:PL	0/1:23,27:50:255,0,255	0/0:39,0:39:0,117,255	1/1:0,53:53:255,159,0
+chr21	25688244	chr21:25688244:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<21>,<26>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,13,0:27:255,0,255,255,255,255	0/2:9,0,7:20:149,180,255,0,243,226	1/1:0,18,0:18:255,54,0,255,54,255
+chr21	25688291	chr21:25688291:M	CACACGCACGCACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,18:39:219,0,255	0/0:33,0:34:0,97,255	1/1:0,24:24:255,71,0
+chr21	25689013	chr21:25689013:M	TTTTTTGTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,20:35:255,0,146	0/0:48,0:49:0,143,255	1/1:0,45:46:255,135,0
+chr21	25692007	chr21:25692007:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,9:22:187,161,255,0,223,255	0/1:14,8,0:22:75,0,180,117,241,255	2/2:0,1,15:18:255,255,255,50,34,0
+chr21	25694836	chr21:25694836:M	AAAAAAAAAAAAAATAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,2:30:0,51,255	0/1:12,8:23:94,0,145	0/0:25,1:27:0,61,255
+chr21	25694969	chr21:25694969:M	TTTTTCTTTCTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,12:18:166,0,57	0/0:17,1:19:0,38,255	1/1:3,20:24:255,6,0
+chr21	25697008	chr21:25697008:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:11:0,32,198	0/1:7,2:10:5,0,100	0/1:9,3:12:17,0,123
+chr21	25697952	chr21:25697952:M	CTCTCTCTCTCGCTCTCTCTC	<9.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:33,1:35:0,82,255	0/0:33,0:33:0,90,255	0/1:13,16:31:108,0,76
+chr21	25700317	chr21:25700317:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,1:49:0,126,255	0/1:23,17:42:190,0,255	0/0:46,1:47:0,120,255
+chr21	25701925	chr21:25701925:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,3:40:0,63,255	0/1:17,24:42:255,0,180	0/0:37,2:40:0,82,255
+chr21	25703769	chr21:25703769:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:51:255,139,0	0/1:16,17:39:255,0,255	1/1:0,25:35:255,101,0
+chr21	25715986	chr21:25715986:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9,1:10:172,29,0,145,12,142	1/2:0,3,3:6:123,51,34,42,0,33	0/1:2,4,1:8:61,0,15,41,18,93
+chr21	25720457	chr21:25720457:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:15:234,26,0	1/1:1,10:12:143,7,0	0/1:3,12:15:167,0,9
+chr21	25731407	chr21:25731407:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:19:255,55,0	1/1:0,27:27:255,78,0	1/1:0,34:34:255,99,0
+chr21	25742760	chr21:25742760:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,33:34:255,255,255,82,100,0	1/2:0,17,12:30:255,178,124,255,0,224	2/2:0,0,33:33:255,255,255,97,97,0
+chr21	25743585	chr21:25743585:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,3:34:0,44,255	0/1:12,19:33:239,0,116	0/0:30,2:35:0,66,255
+chr21	25744043	chr21:25744043:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:12:9,0,121	0/0:1,0:1:0,3,17	1/1:1,7:9:101,6,0
+chr21	25746010	chr21:25746010:M	TTTTTTTTTTTCTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,2:40:0,81,255	0/1:16,19:35:234,0,180	0/0:36,0:36:0,106,255
+chr21	25755433	chr21:25755433:M	AAAAAAAAAAAAAAAAAAAAA	<15>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0,1:7:0,21,182,3,106,87	0/2:4,0,6:10:70,98,250,0,67,38	1/2:1,14,2:18:255,9,16,255,0,255
+chr21	25756195	chr21:25756195:M	TTTTTATTTTTA	<1.3>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/1:21,34:55:255,0,255	0/1:25,21:46:255,0,255	0/0:47,0:47:0,141,255
+chr21	25775232	chr21:25775232:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:48:0,132,255	0/1:21,15:38:174,0,255	0/0:48,2:50:0,111,255
+chr21	25780241	chr21:25780241:M	TGAATGAATGA	<1.8>	.	.	Motif=TGAA	GT:AD:DP:PL	0/0:49,0:49:0,145,255	0/1:24,22:46:255,0,255	0/0:38,0:38:0,112,255
+chr21	25784517	chr21:25784517:M	GTTTGTTTGTTT	<2.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:21,0:22:0,35,97	0/1:15,17:36:33,0,10	0/0:26,0:26:0,46,125
+chr21	25784526	chr21:25784526:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:17:0,16,215	0/1:4,17:23:214,0,9	0/0:19,1:20:0,42,255
+chr21	25785745	chr21:25785745:M	TTTTCTTTTCTT	<1.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,49:49:255,147,0	1/1:0,39:39:255,117,0
+chr21	25786151	chr21:25786151:M	AAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,0,24:44:255,255,255,0,255,235	0/1:18,22,0:42:255,0,255,255,255,255	0/2:23,0,24:49:255,255,255,0,255,255
+chr21	25789328	chr21:25789328:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:20:0,23,255	0/0:20,3:25:0,3,255	0/1:17,7:27:46,0,255
+chr21	25797941	chr21:25797941:M	AAAAAAAAAAAAATAAATAAATAAATAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,74,255	0/1:12,7:19:125,0,255	0/0:21,0:22:0,65,255
+chr21	25800869	chr21:25800869:M	CAAAAAAACAAACAAACAAA	<4>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:21,15:36:181,0,255	0/0:40,0:40:0,118,255	1/1:0,31:31:255,92,0
+chr21	25800972	chr21:25800972:M	TTTTTTTCTTTTCTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:17,14:33:169,0,203	0/0:16,1:17:0,32,255
+chr21	25804875	chr21:25804875:M	CCCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/1:10,8:18:192,0,210	0/0:19,0:19:0,57,255
+chr21	25805640	chr21:25805640:M	TGTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTT	<6.4>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:14,21:36:255,0,255	0/1:12,19:32:255,0,228
+chr21	25808500	chr21:25808500:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:26:188,0,255	0/1:9,7:18:148,0,186	0/1:11,7:20:134,0,243
+chr21	25809875	chr21:25809875:M	CTCTCTCTCTCGCTTTCTCTCTC	<6.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:21,25:46:255,0,255	0/1:12,29:41:255,0,206	0/0:33,0:33:0,99,255
+chr21	25815569	chr21:25815569:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:5:18,0,27	0/1:7,3:11:15,0,86	0/1:7,4:12:37,0,76
+chr21	25816582	chr21:25816582:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:41:255,0,253	0/1:19,13:32:136,0,241	0/0:48,0:49:0,144,255
+chr21	25819113	chr21:25819113:M	TTTTTCTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:19,0:20:0,58,255	0/1:8,10:20:120,0,103
+chr21	25819625	chr21:25819625:M	ACACACACACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,10:18:245,0,153	0/1:1,12:18:255,0,27	0/1:4,12:17:255,0,66
+chr21	25825746	chr21:25825746:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:33:167,0,250	1/1:0,27:27:255,79,0	0/1:27,23:51:255,0,255
+chr21	25826419	chr21:25826419:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,8,3:17:143,8,54,129,0,242	1/1:2,17,0:25:255,37,0,255,68,255	0/2:5,0,7:14:107,142,255,0,75,49
+chr21	25830138	chr21:25830138:M	AAATAAATAAATAAATAAATAAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:35,0:35:0,103,255	0/1:15,13:28:162,0,200
+chr21	25836137	chr21:25836137:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:34,6,0	0/1:1,4:6:50,0,2	1/1:0,3:4:50,9,0
+chr21	25855579	chr21:25855579:M	AAAAAAAAAAAAA	<10>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10,7:30:184,0,255,158,67,255	0/1:10,9,4:28:162,0,255,159,91,255	0/2:20,5,10:36:31,3,255,0,128,162
+chr21	25855607	chr21:25855607:M	ACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:37:0,90,255	0/1:15,10:35:35,0,196	0/0:26,0:34:0,76,255
+chr21	25860626	chr21:25860626:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3,1:8:68,0,65,38,38,73	1/2:1,3,4:8:111,40,57,33,0,28	0/1:5,4,2:14:109,0,107,63,57,119
+chr21	25865507	chr21:25865507:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,7,0:14:205,0,140,133,160,255	1/1:0,5,0:10:245,27,0,182,27,166	0/2:4,3,6:16:201,51,151,0,63,95
+chr21	25866543	chr21:25866543:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,7:16:84,0,99	1/1:2,12:16:177,3,0	0/1:17,12:30:130,0,230
+chr21	25867440	chr21:25867440:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,4,8:20:140,42,197,0,35,64	1/2:0,14,7:22:255,101,56,246,0,187	0/2:5,1,10:17:144,130,255,0,76,48
+chr21	25873196	chr21:25873196:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6,0:17:57,0,131,89,173,255	1/2:2,5,5:12:152,49,49,37,0,72	0/1:9,7,0:18:71,0,118,102,163,255
+chr21	25873977	chr21:25873977:M	TTTTTTTTTTTTTTTTT	<18>,<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,7,0,5:14:227,120,112,178,89,191,107,0,134,185	0/2:1,0,5,1:7:142,95,95,0,17,9,68,71,10,79	1/3:1,11,2,6:21:255,163,136,231,85,234,181,0,172,255
+chr21	25877608	chr21:25877608:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<8>,<9>	.	.	Motif=TAAA	GT:AD:DP:PL	1/2:0,13,3:16:255,50,11,250,0,207	1/1:0,14,0:14:255,42,0,255,41,255	1/2:0,19,10:29:255,161,104,255,0,255
+chr21	25880010	chr21:25880010:M	TTTATTTATTTATTTATTTATTTATTTATTTATT	<6.5>,<9.5>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,4,4:8:169,76,93,104,0,93	1/1:0,6,0:6:168,18,0,170,18,171	1/2:0,3,3:6:125,56,71,78,0,69
+chr21	25887518	chr21:25887518:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,15:29:255,0,63	0/1:2,11:19:255,0,43	0/1:5,12:22:255,0,88
+chr21	25890723	chr21:25890723:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:171,21,0	0/1:5,3:9:52,0,122	1/1:0,6:8:176,23,0
+chr21	25892047	chr21:25892047:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,9,7:20:255,72,92,133,0,119	1/2:1,9,7:17:255,84,82,136,0,106	1/2:1,17,10:29:255,132,103,255,0,229
+chr21	25892950	chr21:25892950:M	AAAAAAAAAAAACAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,14:28:255,255,184,255,0,184	0/2:14,0,15:29:255,255,255,0,255,255	1/2:0,17,16:33:255,255,199,255,0,218
+chr21	25895111	chr21:25895111:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/1:20,26:50:255,0,255	0/1:25,28:56:255,0,255
+chr21	25895177	chr21:25895177:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:21:255,0,159	0/1:12,17:29:255,0,249	0/1:12,16:29:255,0,250
+chr21	25896414	chr21:25896414:M	ACACTCACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:21,24:47:219,0,185	0/1:17,17:38:138,0,156	0/1:22,21:43:181,0,195
+chr21	25900988	chr21:25900988:M	AAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:7,16:24:255,0,132	1/1:0,23:23:255,69,0
+chr21	25901297	chr21:25901297:M	AAAAAAAAAAAAAAAAAAAAAACAAAA	<15>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,1:6:83,83,83,15,15,0	1/1:0,21,1:24:255,66,0,255,27,255	2/2:0,0,3:4:101,101,101,12,12,0
+chr21	25901399	chr21:25901399:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47:48:255,141,0	0/1:23,25:48:255,0,255	1/1:1,46:49:255,115,0
+chr21	25908693	chr21:25908693:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,30:36:255,0,4	1/1:3,30:34:255,44,0	1/1:5,35:40:255,28,0
+chr21	25924380	chr21:25924380:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,15:18:223,0,2	1/1:2,16:18:244,18,0	1/1:1,10:11:162,14,0
+chr21	25927003	chr21:25927003:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:10,3,0	.	1/1:0,3:3:78,9,0
+chr21	25928343	chr21:25928343:M	AAACAAACAAACAAACAAACAAACAAACAAAAAAAC	<10>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:1,26:27:255,61,0	1/1:0,27:27:255,80,0
+chr21	25928754	chr21:25928754:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:18:255,45,0	1/1:0,14:18:255,50,0	1/1:0,20:26:255,43,0
+chr21	25930587	chr21:25930587:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,27:28:255,82,0	0/1:17,9:26:84,0,229	0/1:17,15:32:182,0,222
+chr21	25935840	chr21:25935840:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:44,8,0	1/1:0,5:5:81,15,0	0/1:1,3:4:39,0,5
+chr21	25946667	chr21:25946667:M	AAAAATAAAAATAAAAATAAAAATAAAAATAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:233,0,255	0/0:29,0:29:0,87,255	0/1:17,18:35:255,0,255
+chr21	25951141	chr21:25951141:M	GGCCAGGGCCAG	<2.2>	.	.	Motif=GGCCAG	GT:AD:DP:PL	1/1:0,35:35:255,97,0	1/1:0,49:49:255,136,0	1/1:0,50:50:255,138,0
+chr21	25952192	chr21:25952192:M	ACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,8:28:55,0,250	0/1:22,12:35:94,0,255	0/1:17,10:27:88,0,204
+chr21	25952379	chr21:25952379:M	TTTTTTTTTTTCTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,40:43:255,71,0	1/1:2,27:29:255,50,0	1/1:2,31:33:255,61,0
+chr21	25964595	chr21:25964595:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,13:16:186,0,7	0/1:3,4:7:48,0,31	0/1:7,10:17:126,0,73
+chr21	25968323	chr21:25968323:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,3:16:3,0,169	0/0:11,1:12:0,19,159	0/1:8,5:14:41,0,99
+chr21	25969834	chr21:25969834:M	GAAAAGAAAAGAAAAGAAAACAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGAAGA	<12.8>	.	.	Motif=GAAAA	GT:AD:DP:PL	1/1:0,5:6:89,17,0	1/1:0,4:5:74,14,0	0/0:6,1:7:0,5,80
+chr21	25980661	chr21:25980661:M	AAACAAACAAACAAAAAACAAAACAAACAAACAAAAAACA	<9.2>,<10.2>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,0,48:48:255,255,255,144,142,0	1/2:0,12,23:35:255,255,255,217,0,116	2/2:0,0,28:28:255,255,255,84,83,0
+chr21	25981712	chr21:25981712:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:12:17,0,120	0/1:11,10:22:103,0,120	0/1:12,3:18:6,0,172
+chr21	25989923	chr21:25989923:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,3:43:0,71,255	0/1:20,28:49:255,0,221	0/0:44,3:47:0,84,255
+chr21	25990438	chr21:25990438:M	AGCAATAGCAATA	<2.7>	.	.	Motif=AGCAAT	GT:AD:DP:PL	0/0:43,0:43:0,129,255	0/1:20,21:41:255,0,255	0/0:47,0:47:0,141,255
+chr21	25992388	chr21:25992388:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:7,25:33:255,0,35	0/0:28,0:31:0,90,255
+chr21	25995945	chr21:25995945:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:26,14:42:135,0,255	0/0:46,0:46:0,136,255
+chr21	25998391	chr21:25998391:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,2,12:27:150,187,255,0,149,161	0/1:11,14,2:29:174,0,130,215,125,255	0/2:15,1,10:27:110,166,255,0,206,200
+chr21	26007431	chr21:26007431:M	TATATTTATAAATTATATATTATATACTATATATTACAATATATAATTATATA	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,3:12:99,0,151	0/0:1,0:1:0,3,25	0/1:6,1:7:21,0,128
+chr21	26009580	chr21:26009580:M	TTTTTCTTTTCTTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,20:22:255,43,0	0/1:14,16:31:195,0,154	1/1:1,22:23:255,50,0
+chr21	26012976	chr21:26012976:M	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAACAAACAAAA	<7>	.	.	Motif=AACAA	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,26:26:255,78,0	1/1:0,30:30:255,90,0
+chr21	26013483	chr21:26013483:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:2,42:46:255,99,0	1/1:1,43:46:255,108,0
+chr21	26016931	chr21:26016931:M	GGGGGGCGGGGGGCGGGGGGCGGGGGG	<10>,<19>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,26,0:26:255,78,0,255,78,255	1/2:0,11,4:15:255,104,71,255,0,255	1/1:0,37,0:37:255,111,0,255,111,255
+chr21	26017199	chr21:26017199:M	AAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:119,12,0	1/1:0,1:2:29,3,0	1/1:0,3:4:88,10,0
+chr21	26017410	chr21:26017410:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:115,20,0	0/1:3,12:15:158,0,7	1/1:0,7:9:131,23,0
+chr21	26021047	chr21:26021047:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:13:215,38,0	0/1:4,6:11:79,0,35	1/1:1,5:8:80,3,0
+chr21	26028177	chr21:26028177:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:25:0,42,255	0/1:12,11:25:135,0,130	0/0:26,2:30:0,52,255
+chr21	26032795	chr21:26032795:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,25,15:40:255,198,123,255,0,255	2/2:0,0,21:21:255,255,255,61,61,0	0/1:14,22,1:37:255,0,255,255,201,255
+chr21	26034639	chr21:26034639:M	AAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAGAAAAGAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:172,17,0	1/1:1,10:14:183,23,0	1/1:0,6:7:114,20,0
+chr21	26040606	chr21:26040606:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:12:82,0,47	0/1:10,6:16:56,0,125	0/1:14,4:18:18,0,195
+chr21	26040762	chr21:26040762:M	AAACAAACAAACAAACAAACAAACAAACA	<8.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/1:17,17:34:209,0,209	0/1:15,18:33:242,0,185
+chr21	26054621	chr21:26054621:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:96,17,0	0/1:4,4:8:42,0,42	0/1:3,2:7:13,0,53
+chr21	26057467	chr21:26057467:M	CACACACCACACACACACACACACACACACACAC	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:30:0,85,255	0/1:15,18:36:213,0,187	0/0:23,0:24:0,70,255
+chr21	26059891	chr21:26059891:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,0,0	.	1/1:0,4:6:145,18,0
+chr21	26062231	chr21:26062231:M	ACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,11:25:195,0,255	0/1:14,7:22:125,0,255	0/0:27,0:30:0,74,255
+chr21	26062662	chr21:26062662:M	AAATAAATAAATAAATAAATAAATAAATAAATA	<9.2>,<11.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,12,3:15:255,79,43,229,0,255	0/2:11,0,6:17:127,157,255,0,198,255	1/1:0,20,0:20:255,59,0,255,60,255
+chr21	26068364	chr21:26068364:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:20:90,0,255	0/1:11,13:28:255,0,217	0/0:18,1:20:0,30,255
+chr21	26074751	chr21:26074751:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,23:43:255,0,235	1/1:0,40:40:255,117,0	0/1:22,21:43:246,0,255
+chr21	26077063	chr21:26077063:M	AAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,14:21:255,24,0	1/1:0,18:19:255,53,0	1/1:1,19:20:255,41,0
+chr21	26079045	chr21:26079045:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,1,2:9:9,17,121,0,71,93	0/1:1,3,0:6:38,0,6,42,6,81	0/2:6,1,5:13:51,59,183,0,61,80
+chr21	26080770	chr21:26080770:M	AAAAAAAAAAAAAAAGAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:16,12:28:120,0,188	0/0:22,1:24:0,50,255
+chr21	26082231	chr21:26082231:M	AAATAAATAAATAAATAAATAA	<6.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:19,9:28:83,0,255	0/1:15,26:41:255,0,162
+chr21	26084228	chr21:26084228:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:23,5,0	1/1:0,3:4:99,12,0	.
+chr21	26086563	chr21:26086563:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,45,0:46:255,117,0,255,135,255	1/2:1,19,21:41:255,255,249,255,0,225	1/1:3,28,4:35:255,48,0,255,29,255
+chr21	26105069	chr21:26105069:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,6:10:84,89,177,2,22,0	1/2:0,5,3:10:193,47,51,129,0,108	0/2:3,0,4:10:53,58,181,0,49,27
+chr21	26108608	chr21:26108608:M	CGGGTGCGGGTG	<1.8>	.	.	Motif=CGGGTG	GT:AD:DP:PL	1/1:0,40:40:255,111,0	1/1:0,48:48:255,133,0	1/1:0,43:43:255,119,0
+chr21	26111088	chr21:26111088:M	AAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,0:11:0,33,255	0/1:2,5:10:124,0,51	0/0:5,0:8:0,23,179
+chr21	26118885	chr21:26118885:M	AAAAAAAAATGAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:33:211,0,189	0/1:16,17:38:198,0,190	0/1:22,13:36:137,0,255
+chr21	26119686	chr21:26119686:M	ACACACACACACACACACACATATACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,19:39:248,0,255	0/1:24,17:41:184,0,255	0/1:14,11:26:128,0,192
+chr21	26126978	chr21:26126978:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,16:29:213,0,157	0/0:38,0:39:0,112,255	0/1:24,11:38:90,0,255
+chr21	26127200	chr21:26127200:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:35:199,0,255	0/1:22,23:46:255,0,255	0/1:20,28:50:255,0,231
+chr21	26131906	chr21:26131906:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,108,255	0/1:22,15:39:255,0,255	0/0:44,0:48:0,138,255
+chr21	26136134	chr21:26136134:M	AAAGAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAAGAAA	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,7:7:78,19,0	.	1/1:0,4:4:44,11,0
+chr21	26138527	chr21:26138527:M	AAAAAAAAAAAAAAAAA	<14>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,11,9:20:255,255,255,143,166,110,204,175,0,148	1/3:1,18,1,12:32:255,194,255,255,203,255,255,0,255,255	2/3:2,0,17,8:27:255,255,255,88,164,91,255,255,0,232
+chr21	26138695	chr21:26138695:M	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	<6.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/1:15,15:30:184,0,184	0/0:41,0:41:0,121,255
+chr21	26139880	chr21:26139880:M	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAA	<8.5>,<9.5>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,1,32:33:255,255,255,97,78,0	1/2:0,15,14:29:255,216,171,255,0,189	2/2:0,1,31:32:255,255,255,94,76,0
+chr21	26150598	chr21:26150598:M	TAGATAGACAGATAGATAGACAGATAGATAGA	<10>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:9,7:19:120,0,166	0/1:10,1:20:3,0,196	0/1:10,20:33:255,0,148
+chr21	26153456	chr21:26153456:M	TTGTTGTTGTTGTTGTT	<6.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:11,12:23:164,0,145	0/0:35,0:35:0,103,255	0/1:13,21:34:255,0,144
+chr21	26156001	chr21:26156001:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,4:11:46,0,72	0/0:6,1:8:0,6,92	0/1:3,3:9:39,0,37
+chr21	26162910	chr21:26162910:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,7:25:59,0,255	0/0:36,0:40:0,116,255	0/1:24,14:38:148,0,255
+chr21	26163066	chr21:26163066:M	AAAAAAAAAAAAAACAAAAACAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,10:23:115,0,171	0/1:15,17:34:198,0,180	0/1:9,4:13:33,0,123
+chr21	26164856	chr21:26164856:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:9,11:22:139,0,88	0/0:23,1:25:0,56,255
+chr21	26164894	chr21:26164894:M	AAAAAAAGAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:151,0,187	0/0:42,1:44:0,111,255	0/1:12,13:26:163,0,153
+chr21	26166872	chr21:26166872:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAAAGAGACAGAG	<19.5>,<20.5>	.	.	Motif=GA	GT:AD:DP:PL	0/2:9,3,9:23:255,74,255,0,207,205	0/1:7,12,0:19:255,0,142,128,174,255	0/2:4,0,15:22:255,162,255,0,132,92
+chr21	26166928	chr21:26166928:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<15>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,13,1:35:121,0,205,194,255,255	0/2:11,0,12:23:243,255,255,0,164,225	0/1:16,18,0:36:189,0,148,255,248,255
+chr21	26172797	chr21:26172797:M	AAAAAAAAGAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:41:255,121,0	1/1:1,33:34:255,82,0	0/1:17,17:34:214,0,216
+chr21	26180161	chr21:26180161:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:17:55,0,143	0/0:13,1:15:0,27,210	0/1:9,10:21:122,0,96
+chr21	26186140	chr21:26186140:M	TTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:88,15,0	0/1:3,2:7:22,0,41	0/1:4,4:9:43,0,54
+chr21	26192948	chr21:26192948:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,21:40:255,0,243	0/1:17,10:27:100,0,225	0/0:38,0:38:0,112,255
+chr21	26193424	chr21:26193424:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,2:21:0,25,255	0/1:10,10:24:143,0,103	0/1:14,12:26:137,0,173
+chr21	26193552	chr21:26193552:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:13:0,4,254	0/1:8,11:21:255,0,164	0/1:9,8:18:173,0,204
+chr21	26193721	chr21:26193721:M	TTTTTTTTGTTCTGTTTTTTTTTTTTTTTTT	<45>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:7:98,13,0	1/1:0,0:4:0,0,0	1/1:0,8:12:235,27,0
+chr21	26194289	chr21:26194289:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:22,0,30:52:255,255,255,0,255,255	0/1:12,22,1:37:255,0,255,255,211,255	1/2:0,21,19:40:255,255,234,255,0,255
+chr21	26197508	chr21:26197508:M	ATACATACATACATACATACATACATACATACATACATACATGCATACATA	<8.8>,<10.8>,<11.8>	.	.	Motif=ATAC	GT:AD:DP:PL	2/3:0,0,9,14:23:255,255,255,189,230,162,146,147,0,80	1/3:0,12,2,16:30:255,255,255,255,219,255,255,0,255,255	1/2:0,15,8,0:24:255,206,161,255,0,255,255,127,255,255
+chr21	26198424	chr21:26198424:M	AAAAAAAAAAAAAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:25:200,0,97	1/1:0,24:24:255,70,0	0/1:19,14:34:155,0,239
+chr21	26198462	chr21:26198462:M	TTTCTTTTTTTTTCTTTT	<1.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:14,16:31:255,0,255	0/1:19,17:36:255,0,255	1/1:0,46:46:255,138,0
+chr21	26202002	chr21:26202002:M	AACAACAACAA	<2.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:15,29:44:255,0,161	0/0:46,0:46:0,135,255	0/1:32,31:63:255,0,255
+chr21	26208416	chr21:26208416:M	AATTTTATTTTTAATTTT	<3.2>	.	.	Motif=AATTTT	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:9,8:17:147,0,172	0/1:21,13:34:220,0,255
+chr21	26209215	chr21:26209215:M	TTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/1:8,11:19:144,0,89	0/1:15,15:30:194,0,194
+chr21	26215457	chr21:26215457:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,8:12:104,0,35	0/1:0,1:5:7,0,16	0/1:1,8:10:107,0,1
+chr21	26216604	chr21:26216604:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,6:24:38,0,247	0/1:7,2:11:3,0,110	1/1:0,11:12:183,24,0
+chr21	26226509	chr21:26226509:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:96,6,0	1/1:0,3:5:61,11,0	0/1:1,4:5:53,0,2
+chr21	26226711	chr21:26226711:M	AGAGAGAAAGAGAGAGAGA	<3.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:23,26:49:255,0,255	0/1:22,26:48:255,0,255	0/0:41,0:41:0,123,255
+chr21	26226759	chr21:26226759:M	AAAAAGAAAAGAAAAGAAATAAAAAAAGAAAAAAGAAAGAAAAAAGAAAA	<22>,<49>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,17:37:255,197,255,255,0,255	1/2:0,9,10:27:255,114,221,201,0,174	1/2:0,9,15:28:255,172,255,200,0,159
+chr21	26235433	chr21:26235433:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,28:44:255,0,99	0/0:34,1:36:0,88,255	0/1:16,17:35:228,0,192
+chr21	26236885	chr21:26236885:M	TGCCCATGCCCA	<1.8>	.	.	Motif=TGCCCA	GT:AD:DP:PL	1/1:0,28:31:255,78,0	1/1:0,23:25:255,64,0	1/1:0,39:40:255,108,0
+chr21	26241099	chr21:26241099:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,7:8:206,127,106,24,6,0	1/2:0,3,12:15:255,199,158,51,0,6	1/2:2,4,9:16:255,104,127,16,0,27
+chr21	26241264	chr21:26241264:M	TTTTGTTTTTTTTTTTATTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:1,13:15:218,26,0	1/1:1,16:17:255,32,0
+chr21	26242421	chr21:26242421:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,24:40:255,0,206	0/0:25,0:26:0,78,255	0/1:13,18:37:255,0,255
+chr21	26243631	chr21:26243631:M	TTTTTCTTTCTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,15:32:191,0,226	0/0:39,0:39:0,115,255	0/1:11,14:25:186,0,128
+chr21	26247353	chr21:26247353:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,27,22:49:255,255,255,255,0,255	2/2:0,2,51:53:255,255,255,156,120,0	1/2:0,29,35:64:255,255,255,255,0,255
+chr21	26249109	chr21:26249109:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:19:137,0,70	0/1:12,4:18:26,0,161	0/1:9,10:19:120,0,101
+chr21	26252985	chr21:26252985:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:9:36,0,53	0/0:4,1:6:0,1,61	1/1:0,3:5:40,1,0
+chr21	26256744	chr21:26256744:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:7:124,21,0	.	1/1:0,7:7:122,21,0
+chr21	26259758	chr21:26259758:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,4:16:255,42,36,165,0,141	0/2:2,1,6:9:85,67,115,0,17,8	1/2:1,6,8:16:249,99,103,92,0,67
+chr21	26262784	chr21:26262784:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:145,0,180	0/0:26,0:28:0,81,255	0/1:12,15:29:187,0,144
+chr21	26264705	chr21:26264705:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,44:45:255,114,0	1/1:0,40:40:255,118,0	1/1:2,60:62:255,146,0
+chr21	26268884	chr21:26268884:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,54:57:255,148,0	1/1:1,33:37:255,90,0	1/1:4,49:54:255,86,0
+chr21	26270944	chr21:26270944:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,49:50:255,147,0	1/1:0,45:45:255,132,0	1/1:0,40:40:255,118,0
+chr21	26279778	chr21:26279778:M	AAAAGAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:30:255,0,119	1/1:1,30:32:255,76,0	0/1:16,10:27:104,0,223
+chr21	26280552	chr21:26280552:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:14:69,0,78	1/1:1,12:15:196,24,0	0/1:9,4:15:44,0,114
+chr21	26280623	chr21:26280623:M	AAAAAAAAAAACAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,19:32:242,0,137	1/1:0,19:19:255,56,0	0/0:21,4:25:0,4,255
+chr21	26284281	chr21:26284281:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,8:21:83,0,155	0/1:3,15:20:198,0,12	0/1:12,7:20:67,0,157
+chr21	26287412	chr21:26287412:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:11:0,6,248	0/0:14,0:19:0,55,255	0/1:9,4:13:70,0,207
+chr21	26288931	chr21:26288931:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGCATGCATGTATGCATGCATGCATGTATGTATGTATGTATGTATGTATGTATGTAT	<12.8>,<15.8>,<16.8>	.	.	Motif=TATG	GT:AD:DP:PL	1/2:0,4,2,0:10:124,38,23,74,0,63,111,29,74,106	2/3:0,0,2,3:5:102,98,95,45,45,32,30,29,0,16	1/2:0,3,3,0:8:123,56,43,55,0,42,105,43,55,98
+chr21	26289027	chr21:26289027:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<14.8>,<16.8>,<17.8>	.	.	Motif=TATC	GT:AD:DP:PL	2/3:0,0,9,8:24:255,255,255,140,140,91,157,157,0,108	0/3:17,0,0,5:22:85,137,255,83,255,255,0,255,255,255	1/2:0,10,6,0:22:255,163,133,255,0,255,255,102,255,255
+chr21	26289692	chr21:26289692:M	TTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:205,24,0	1/1:0,3:6:131,18,0	1/1:0,6:9:210,25,0
+chr21	26291439	chr21:26291439:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:38:255,114,0	1/1:0,32:36:255,99,0	1/1:0,48:50:255,147,0
+chr21	26291833	chr21:26291833:M	AAAAAAAAAAACAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,63,0	1/1:0,20:23:255,65,0	1/1:1,23:25:255,45,0
+chr21	26294961	chr21:26294961:M	TTATTTTATTTTATTTATATTATATTATATTATATTATATTATATTATATTAT	<14.6>,<15.6>	.	.	Motif=TTATA	GT:AD:DP:PL	1/2:0,9,3:12:255,59,23,175,0,140	.	1/2:0,1,1:2:61,19,13,19,0,13
+chr21	26299947	chr21:26299947:M	TTTTTTTGTTTTTTGTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,19:23:255,255,255,63,18,0	1/2:0,3,7:10:255,119,90,51,0,22	2/2:0,0,17:17:255,255,255,51,50,0
+chr21	26311383	chr21:26311383:M	ATATATATATACATGTATATATATATATATGTGCATACATATATACATGTATATATAT	<15>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,5:15:89,0,223	0/0:27,0:27:0,81,255	0/1:7,2:9:26,0,161
+chr21	26311771	chr21:26311771:M	ATATATACACATACATATATACATATATACATATATGTATGTACGTATATATATACATTTATATAT	<10>	.	.	Motif=ATAT	GT:AD:DP:PL	0/1:3,10:13:255,0,38	0/1:5,15:20:255,0,68	1/1:0,16:16:255,48,0
+chr21	26311850	chr21:26311850:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,0,0:34:0,102,255,96,255,255	0/2:13,0,23:39:211,211,255,0,140,66	0/1:13,20,1:35:255,0,220,255,156,255
+chr21	26311874	chr21:26311874:M	TATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:9,1,7:20:54,93,240,0,71,63	0/1:9,10,0:27:115,0,32,172,82,255	1/2:1,11,7:33:194,104,142,134,0,203
+chr21	26325011	chr21:26325011:M	AAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,9,0:25:89,0,207,160,255,255	0/2:14,1,3:22:59,78,255,0,226,255	1/2:1,16,7:25:255,169,134,255,0,255
+chr21	26334783	chr21:26334783:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,24:40:255,0,172	0/0:19,2:21:0,26,255	0/1:15,13:30:159,0,194
+chr21	26334945	chr21:26334945:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<10>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:7,6:13:71,0,89	0/1:3,10:13:150,0,18
+chr21	26351915	chr21:26351915:M	AGAGAGAGAGAGAGAGAGAGTGAGAGAAAGACAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:10,13:23:255,0,202	0/0:26,0:27:0,78,255	0/1:15,14:31:255,0,255
+chr21	26356078	chr21:26356078:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,19:33:255,0,255	0/0:35,0:35:0,105,255	0/1:16,16:32:255,0,255
+chr21	26363925	chr21:26363925:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,20:23:255,48,0	1/1:3,21:24:255,18,0	1/1:0,18:19:255,55,0
+chr21	26365813	chr21:26365813:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,34:34:255,100,0	1/1:0,38:38:255,112,0
+chr21	26367626	chr21:26367626:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:21:84,0,255	1/1:0,16:17:255,51,0	0/1:13,6:22:124,0,255
+chr21	26371726	chr21:26371726:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,8,1:12:255,140,123,21,2,0,152,89,3,125	3/3:0,1,1,11:13:255,255,255,189,172,152,37,6,7,0	1/2:0,3,7,0:11:255,119,87,63,0,32,215,99,62,192
+chr21	26379272	chr21:26379272:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:35,0,34	0/1:1,5:8:72,0,4	1/1:1,7:10:126,12,0
+chr21	26385124	chr21:26385124:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:82,14,0	1/1:2,8:12:124,1,0	1/1:0,8:8:138,23,0
+chr21	26401715	chr21:26401715:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,2:25:0,35,255	0/0:19,0:20:0,58,255	0/1:14,9:23:93,0,182
+chr21	26409615	chr21:26409615:M	ACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,9:25:160,0,255	0/1:12,15:32:255,0,255	0/1:25,9:40:141,0,255
+chr21	26412725	chr21:26412725:M	ACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:9,0,6:17:117,102,234,0,171,228	1/2:0,9,5:14:249,83,43,125,0,110	0/0:13,0,0:14:0,41,236,42,255,255
+chr21	26417907	chr21:26417907:M	TAAAATAAAATAA	<2.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:23,20:43:255,0,255	0/1:15,18:33:255,0,225	0/1:25,19:44:255,0,255
+chr21	26418523	chr21:26418523:M	TGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/1:31,18:52:255,0,255	0/1:20,21:43:255,0,255	0/1:15,32:48:255,0,255
+chr21	26426663	chr21:26426663:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<17.5>,<18.5>,<20.5>	.	.	Motif=AG	GT:AD:DP:PL	0/3:8,0,0,5:14:111,140,255,137,255,255,0,219,219,198	1/3:0,8,1,4:14:255,116,91,222,88,193,234,0,116,219	0/2:3,1,7,0:14:191,95,174,0,77,80,195,176,82,255
+chr21	26428225	chr21:26428225:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:28:255,0,255	1/1:0,25:29:255,80,0	0/1:11,11:24:231,0,243
+chr21	26437131	chr21:26437131:M	GTGTGTGTGTGTGTGTGTGTATGTGTTTGTGT	<24>,<25>	.	.	Motif=GT	GT:AD:DP:PL	0/2:15,1,15:31:255,248,255,0,255,255	1/2:0,12,6:19:255,102,50,203,0,153	0/1:19,6,1:27:106,0,255,87,255,255
+chr21	26443409	chr21:26443409:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,3:30:0,34,255	0/1:10,12:24:137,0,122	0/0:35,0:36:0,105,255
+chr21	26451872	chr21:26451872:M	CACACACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,12:24:147,0,139	1/1:2,18:21:255,27,0	0/0:27,0:27:0,79,255
+chr21	26463243	chr21:26463243:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:25:0,63,255	0/1:11,6:21:106,0,249	0/1:9,4:17:87,0,191
+chr21	26474037	chr21:26474037:M	TTTTTGTTTTCGTTTTTTTTTTTTTTTTG	<4.7>	.	.	Motif=TTTTTG	GT:AD:DP:PL	1/1:0,16:17:255,50,0	1/1:1,23:25:255,56,0	1/1:0,16:17:255,50,0
+chr21	26476577	chr21:26476577:M	CTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAATCTTCTATTATCTATCTATCTATCTA	<17.2>,<21.2>	.	.	Motif=CTAT	GT:AD:DP:PL	0/0:7,0,0:8:0,24,212,23,161,143	0/1:2,5,0:7:123,0,37,129,35,159	2/2:0,0,4:4:74,85,115,12,12,0
+chr21	26480555	chr21:26480555:M	TTTTTCTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:33:255,79,0	1/1:2,20:25:255,37,0	1/1:1,31:34:255,77,0
+chr21	26483413	chr21:26483413:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,22:31:255,0,123	1/1:0,45:46:255,138,0	0/1:12,20:37:255,0,218
+chr21	26486620	chr21:26486620:M	TTTTTTTTTCTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:149,0,226	0/0:42,0:42:0,124,255	0/1:20,13:33:147,0,255
+chr21	26487917	chr21:26487917:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:40:255,113,0	1/1:0,47:48:255,143,0	1/1:0,39:42:255,122,0
+chr21	26487960	chr21:26487960:M	TTTTTTTATTTTGCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30:31:255,93,0	1/1:0,46:47:255,141,0	1/1:0,44:44:255,132,0
+chr21	26488241	chr21:26488241:M	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<12.2>,<13.2>	.	.	Motif=CTTC	GT:AD:DP:PL	0/1:8,7,0:15:89,0,108,113,150,255	1/2:0,16,15:31:255,255,178,241,0,196	0/1:11,8,0:19:92,0,148,125,201,255
+chr21	26492717	chr21:26492717:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,40:42:255,86,0	1/1:1,28:29:255,68,0	1/1:1,44:46:255,117,0
+chr21	26502303	chr21:26502303:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,10,13:24:255,202,169,190,0,125	1/1:0,17,2:22:255,57,0,255,27,255	1/2:0,8,14:24:255,212,185,150,0,87
+chr21	26504225	chr21:26504225:M	TATTTATTTATTTATTTATTTATTT	<8.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:18,17:35:255,0,255	0/0:35,0:35:0,105,255	0/1:16,12:28:255,0,255
+chr21	26511981	chr21:26511981:M	CACACATACACACACACACACACACACACACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,11:33:222,0,255	0/1:8,15:25:255,0,161	0/0:26,0:28:0,83,255
+chr21	26512196	chr21:26512196:M	TTTTTTTATTTATTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:18,10:28:97,0,242	0/0:36,0:36:0,106,255
+chr21	26514067	chr21:26514067:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,34:34:255,100,0	0/1:19,21:40:255,0,227
+chr21	26517115	chr21:26517115:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,5:5:138,15,0	0/0:0,0:1:0,3,13
+chr21	26520114	chr21:26520114:M	ATATATATATATATATATATATATATAT	<9>,<12>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,17,16:34:255,255,255,255,0,255	1/1:0,12,0:13:255,39,0,255,39,255	0/2:7,0,8:17:186,212,255,0,188,159
+chr21	26542278	chr21:26542278:M	TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<25.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,10,10:27:255,249,220,138,0,246	0/1:0,3,0:7:30,0,13,46,25,104	2/2:0,1,12:16:255,255,255,34,10,0
+chr21	26544947	chr21:26544947:M	AACAAAAACAAAAACAAAAA	<1.2>	.	.	Motif=AACAAA	GT:AD:DP:PL	1/1:0,4:4:109,12,0	1/1:0,4:4:110,12,0	1/1:0,2:2:51,6,0
+chr21	26547780	chr21:26547780:M	TTTTTTTTTTTTTTCTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,24,11:35:255,176,103,255,0,255	0/2:13,1,18:33:233,251,255,0,218,145	1/2:0,15,10:27:255,155,105,255,0,218
+chr21	26561314	chr21:26561314:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,12,20:34:255,255,255,210,0,255	0/2:20,1,17:38:187,255,255,0,255,247	0/1:18,19,1:39:241,0,221,255,255,255
+chr21	26567009	chr21:26567009:M	AAAAAAAAAAAAAAAAAAAA	<13>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,20,0,6:29:255,154,113,255,124,255,255,0,255,255	2/3:0,0,5,6:12:255,255,255,101,101,69,86,85,0,54	1/2:0,14,3,0:18:255,90,47,255,0,255,255,60,255,255
+chr21	26571518	chr21:26571518:M	AAACAAACAAACAAACAAACAAA	<4.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:10,15:25:217,0,120	0/0:46,0:46:0,135,255	0/1:17,18:35:236,0,217
+chr21	26581993	chr21:26581993:M	TTTACTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<9>,<12>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,15,0:28:255,0,255,255,248,255	1/2:0,11,4:15:255,72,78,255,0,255	0/0:19,0,0:19:0,57,255,56,255,255
+chr21	26583559	chr21:26583559:M	ACACACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/1:17,15:32:176,0,212	0/1:21,30:51:255,0,240
+chr21	26583616	chr21:26583616:M	TATATATATATATAATGTGTATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:14,12:26:157,0,190	0/1:19,7:26:51,0,255	0/0:21,0:21:0,62,255
+chr21	26584093	chr21:26584093:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/1:16,15:32:172,0,200	0/1:17,20:38:255,0,209
+chr21	26596831	chr21:26596831:M	AAATAAATAAATAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:24,20:44:255,0,255	0/1:12,17:29:255,0,239	0/0:41,0:41:0,123,255
+chr21	26599354	chr21:26599354:M	GTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,6,6:13:255,255,255,163,162,138,159,104,0,138	1/3:1,14,1,5:21:255,124,94,255,118,255,221,0,221,255	1/2:1,14,9,0:24:255,133,81,179,0,178,255,151,245,255
+chr21	26618920	chr21:26618920:M	AAAAAAAAAAAAA	<14>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20,0:37:255,0,190,255,255,255	0/2:11,0,8:19:183,216,255,0,189,255	1/2:1,13,16:32:255,255,255,212,0,255
+chr21	26620910	chr21:26620910:M	GTGTGTGTGCATGCGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:22,0:25:0,63,255	0/1:15,14:33:117,0,132	0/1:15,16:38:145,0,130
+chr21	26626951	chr21:26626951:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:0,0,0	1/1:0,1:4:62,9,0	1/1:0,3:5:123,15,0
+chr21	26628410	chr21:26628410:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,23,15:41:255,242,255,255,0,255	1/2:3,17,18:38:255,255,255,249,0,255	2/2:0,0,29:33:255,255,255,96,98,0
+chr21	26628921	chr21:26628921:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,14:24:255,255,255,220,0,178	2/2:0,0,16:16:255,255,255,48,48,0	1/2:0,7,8:18:255,203,178,214,0,190
+chr21	26629167	chr21:26629167:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,23,11:35:255,193,253,255,0,255	1/1:2,31,0:33:255,61,0,255,93,255	1/2:0,15,16:31:255,255,255,255,0,255
+chr21	26630679	chr21:26630679:M	TGTGTGTGTATGTGTGTGTGTGTGTGT	<11.5>,<12.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,2,14:21:209,164,158,45,19,0	1/1:0,13,0:21:255,48,0,244,44,203	1/2:0,9,18:29:255,187,154,139,0,60
+chr21	26632239	chr21:26632239:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:0,0,0	1/1:0,3:4:108,12,0	1/1:0,2:3:73,6,0
+chr21	26638122	chr21:26638122:M	TATATATATATATATATATACACATATATATATATATATGTATATATAT	<8.5>,<18.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:2,0,5:8:123,131,191,0,60,45	1/2:0,14,6:20:255,156,114,255,0,255	0/1:2,11,0:15:255,0,34,255,67,255
+chr21	26638345	chr21:26638345:M	TATATATATATATATATA	<18>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,3:12:39,0,194	1/1:0,1:1:25,3,0	0/0:15,0:16:0,48,255
+chr21	26639690	chr21:26639690:M	GTGTGTGGGTGTCTATGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<25>,<31>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,3,0,3:9:103,70,61,111,70,141,41,0,71,62	2/3:0,0,2,2:5:100,100,100,49,49,43,51,51,0,45	1/2:0,4,4,0:8:144,101,89,54,0,83,155,101,95,196
+chr21	26642320	chr21:26642320:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/1:19,25:44:255,0,238	0/1:25,18:44:198,0,255	0/0:44,0:44:0,130,255
+chr21	26645859	chr21:26645859:M	ATAAAAACAAAAAAGAAAATAAAAATA	<3.7>	.	.	Motif=ATAAAA	GT:AD:DP:PL	0/1:16,24:40:255,0,255	0/1:15,15:30:255,0,255	0/0:36,0:36:0,108,255
+chr21	26646887	chr21:26646887:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,23:47:255,255,255,255,0,255	1/2:0,14,21:36:255,255,255,255,0,255	2/2:1,0,43:46:255,255,255,117,132,0
+chr21	26650125	chr21:26650125:M	GAAAAAGAAAAGGAAAAAGA	<3.5>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:19,24:43:255,0,255	0/1:28,19:47:255,0,255	0/0:37,0:37:0,110,255
+chr21	26651820	chr21:26651820:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:41:255,0,255	0/1:25,19:46:255,0,255	0/0:40,0:42:0,123,255
+chr21	26653445	chr21:26653445:M	TTTTTTTTTTTTTTTTTT	<13>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,0,11:19:166,214,255,0,108,53	1/2:0,21,5:30:255,93,76,255,0,255	0/2:6,0,9:19:136,182,255,0,113,61
+chr21	26658481	chr21:26658481:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:15,6:22:113,0,255	0/0:32,0:32:0,96,255
+chr21	26665544	chr21:26665544:M	CTTTCTTTCTTTCTTT	<3>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:7,28:35:255,0,24	0/0:41,0:41:0,121,255
+chr21	26679776	chr21:26679776:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:20:0,59,255	1/1:2,18:20:255,24,0	0/0:37,6:44:0,21,255
+chr21	26681384	chr21:26681384:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,19:48:212,0,255	1/1:3,28:32:255,41,0	0/0:51,1:56:0,143,255
+chr21	26697932	chr21:26697932:M	AAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,19:22:255,255,255,0,60,4	0/2:1,0,17:22:255,255,255,0,55,1	1/1:1,20,1:22:255,35,0,255,44,255
+chr21	26698764	chr21:26698764:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:28:109,0,221	0/1:15,15:32:180,0,180	0/0:37,0:38:0,112,255
+chr21	26700305	chr21:26700305:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,26,18:44:255,255,218,255,0,255	1/2:0,27,26:53:255,255,255,255,0,255	1/2:0,37,24:61:255,255,255,255,0,255
+chr21	26706669	chr21:26706669:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<11.2>,<12.2>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:16,8,0:24:84,0,240,132,255,255	0/2:14,0,15:30:255,255,255,0,255,255	1/1:0,22,0:22:255,65,0,255,65,255
+chr21	26707896	chr21:26707896:M	GATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<11>	.	.	Motif=GATA	GT:AD:DP:PL	0/0:12,0:19:0,42,255	0/1:10,14:27:255,0,190	0/1:13,17:38:255,0,255
+chr21	26708936	chr21:26708936:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/1:8,13:21:182,0,87	1/1:1,33:34:255,83,0	0/1:9,12:21:159,0,103
+chr21	26714260	chr21:26714260:M	TTTTGTTTTGTTTTGTTTTGTTCTGTTT	<6.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:29,0:29:0,85,255	0/1:14,13:27:164,0,183
+chr21	26717745	chr21:26717745:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGT	<25.5>,<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,3,0,7:10:194,126,201,179,204,244,91,0,54,74	2/3:1,0,6,2:9:96,105,162,19,62,39,88,105,0,166	0/1:11,8,0,0:19:193,0,255,139,191,255,232,192,255,255
+chr21	26719085	chr21:26719085:M	AAAAAAAAAAAAAAAGAAAAAAAGAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:16:194,0,146	1/1:0,18:19:255,54,0	0/1:3,11:14:252,0,44
+chr21	26721320	chr21:26721320:M	AAAAAAAAAAAGAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,17,0:31:230,0,173,255,224,255	1/2:0,17,17:34:255,255,255,255,0,255	0/1:18,26,0:45:255,0,200,255,255,255
+chr21	26721683	chr21:26721683:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:21:255,63,0,255,60,255	1/2:0,6,4:11:255,106,85,166,0,147	1/2:0,12,1:17:255,27,32,255,0,255
+chr21	26722340	chr21:26722340:M	TTTCTTTTTTTTTCTTTT	<3.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,25:25:255,75,0	0/1:24,19:43:255,0,255	0/1:22,23:45:255,0,255
+chr21	26724731	chr21:26724731:M	TGTTTTTTTTTTTTTTTTGTTTTTG	<4>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/0:9,1:10:0,10,152	0/1:4,9:15:138,0,36	0/0:13,0:13:0,38,250
+chr21	26725779	chr21:26725779:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:5:3,0,55	0/1:3,4:7:46,0,30	0/1:3,1:4:6,0,40
+chr21	26727602	chr21:26727602:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,85,255	0/1:14,11:28:111,0,161	0/0:37,0:39:0,111,255
+chr21	26734714	chr21:26734714:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:33:219,0,180	1/1:4,35:40:255,47,0	0/1:15,13:29:160,0,187
+chr21	26742280	chr21:26742280:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:146,15,0	0/0:0,0:4:0,0,0	1/1:0,10:11:255,30,0
+chr21	26742481	chr21:26742481:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,10:18:128,0,85	1/1:1,4:9:73,4,0	0/1:3,6:12:95,0,21
+chr21	26746256	chr21:26746256:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,2,36:40:255,255,255,96,70,0	1/2:2,15,21:38:255,255,255,229,0,157	1/2:0,20,18:42:255,255,213,255,0,255
+chr21	26746899	chr21:26746899:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:25:199,0,255	0/1:10,9:20:189,0,215	0/0:23,0:27:0,74,255
+chr21	26762626	chr21:26762626:M	AAAAAAAAAAAAAAAAAAAA	<21>,<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,4,3:7:193,151,138,53,52,32,70,59,0,50	1/2:0,3,1,0:5:68,17,5,42,0,39,67,14,50,94	1/2:0,2,3,0:5:109,51,37,29,0,20,85,43,34,94
+chr21	26764388	chr21:26764388:M	CACACACACACACACACACACACACACACACACACAC	<14.5>,<15.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,65,255	1/2:0,10,8:19:255,137,82,179,0,127	1/2:0,12,8:20:255,141,83,210,0,154
+chr21	26765106	chr21:26765106:M	TGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<19>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,12,0:24:154,0,146,190,210,255	1/2:0,5,6:11:227,104,74,74,0,56	0/2:16,1,10:31:218,163,255,0,255,255
+chr21	26766282	chr21:26766282:M	ACACACACACACACACACACACACACACACACACACATACCCACACACATACACACACACA	<26.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,4,4:8:166,69,96,108,0,96	1/1:0,5,0:7:161,17,0,154,9,151	0/2:1,0,3:4:39,51,109,0,17,5
+chr21	26767776	chr21:26767776:M	ACACACACACACACACACACACACACACACACACACACACAC	<17>,<18>,<22>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,12,0:26:255,215,139,249,0,175,255,215,249,255	0/2:8,0,11,0:19:255,186,255,0,222,190,255,255,135,255	1/3:1,13,1,6:22:255,86,136,255,150,255,255,0,200,255
+chr21	26768757	chr21:26768757:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:33:0,78,255	0/1:12,9:21:105,0,156	0/1:13,13:26:172,0,168
+chr21	26770320	chr21:26770320:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,33:34:255,100,0	1/1:0,35:36:255,106,0
+chr21	26770853	chr21:26770853:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,2:41:0,81,255	0/1:19,25:45:255,0,201	0/0:42,2:46:0,99,255
+chr21	26772465	chr21:26772465:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:8:31,0,66	0/0:10,2:12:0,1,136	0/1:3,9:14:134,0,15
+chr21	26775179	chr21:26775179:M	TTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:26:255,77,0	0/1:14,8:27:203,0,255	0/1:25,10:38:179,0,255
+chr21	26776964	chr21:26776964:M	ACACACACACACACACACACACACACACACACA	<19.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,13,0,0:30:255,0,255,255,255,255,255,255,255,255	0/3:10,0,2,10:23:255,255,255,82,255,255,0,252,230,229	1/2:0,9,8,2:24:255,212,153,224,0,174,255,76,205,255
+chr21	26786802	chr21:26786802:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:52,2:55:0,126,255	0/1:18,15:33:178,0,233
+chr21	26813982	chr21:26813982:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:37:0,72,255	0/1:16,22:41:255,0,180	0/1:21,19:40:225,0,255
+chr21	26814938	chr21:26814938:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,11:20:133,0,89	1/1:1,14:17:215,27,0	0/0:12,1:16:0,21,188
+chr21	26815095	chr21:26815095:M	AAACAAACAAACAAACAAAACAAAAAAC	<7.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:17,11:28:220,0,255	1/1:0,24:24:255,72,0	0/1:15,12:27:251,0,255
+chr21	26816216	chr21:26816216:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTGTGTGTGTGTGTGTATGTGTGTGTCTGTGT	<36.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,5:6:59,3,0	1/1:0,3:6:43,9,0	1/1:0,2:5:40,8,0
+chr21	26816399	chr21:26816399:M	ATATATATATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,15:29:255,0,202	0/1:21,13:37:216,0,255	0/0:34,1:35:0,80,255
+chr21	26816417	chr21:26816417:M	ACACACACACACACACACACACACACACACACA	<13.5>,<14.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:2,1,7,3:15:159,93,160,23,84,67,127,84,0,233	1/2:0,12,4,0:16:255,49,2,141,0,93,255,50,141,255	2/3:3,4,4,4:15:166,24,117,25,65,81,115,8,0,199
+chr21	26824985	chr21:26824985:M	GAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAA	<5.8>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:1,2:5:39,0,20	0/1:1,4:5:75,0,10	0/0:2,0:2:0,6,47
+chr21	26829295	chr21:26829295:M	GATAGATAGAGAGATCTAGATAGATCTAGATAGATAGATAGATAGATAGATAGA	<12.5>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:12,16:28:227,0,147	1/1:0,11:11:200,32,0	0/1:9,10:19:132,0,112
+chr21	26849665	chr21:26849665:M	TTTTTTTTTTTTTTTT	<17>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,4:14:181,106,83,93,0,157	1/2:0,5,6:13:220,166,150,69,0,120	0/1:10,1,0:21:25,0,76,23,80,255
+chr21	26856469	chr21:26856469:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,21:41:255,0,249	1/1:0,30:33:255,86,0	0/1:16,15:32:178,0,206
+chr21	26863306	chr21:26863306:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,4:5:56,69,111,0,15,3	1/2:0,9,2:14:168,32,16,164,0,231	0/2:2,0,9:12:131,161,255,0,30,0
+chr21	26864743	chr21:26864743:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,18:27:249,0,75	0/1:11,11:25:141,0,120	0/1:5,11:16:149,0,42
+chr21	26868351	chr21:26868351:M	GTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,16,7:25:255,112,144,255,0,255	1/2:0,24,6:31:255,106,86,255,0,255	1/2:0,13,12:27:255,217,255,255,0,255
+chr21	26876593	chr21:26876593:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<7.5>,<20.5>,<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,0,4,0:24:12,72,255,0,255,225,35,255,255,255	1/2:1,8,9,0:24:255,138,252,190,0,178,255,95,206,255	0/3:9,1,0,5:20:84,100,255,44,185,171,0,210,161,206
+chr21	26876629	chr21:26876629:M	GCGCGCGTGCGCGCGCGCGCGC	<7>	.	.	Motif=GC	GT:AD:DP:PL	1/1:0,11:12:255,36,0	1/1:0,22:25:255,75,0	1/1:1,14:18:255,28,0
+chr21	26879466	chr21:26879466:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:4:0,12,70	1/1:0,1:3:38,8,0	0/1:1,3:4:40,0,5
+chr21	26882714	chr21:26882714:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:28:255,0,235	0/0:20,1:26:0,48,255	0/1:8,12:28:255,0,166
+chr21	26883167	chr21:26883167:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,10:26:255,177,226,209,0,255	0/1:18,14,1:33:149,0,230,224,246,255	1/2:2,18,8:29:255,110,148,255,0,255
+chr21	26885723	chr21:26885723:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:32:184,0,217	0/1:19,24:45:255,0,226	0/1:12,16:28:214,0,137
+chr21	26904803	chr21:26904803:M	AAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:13:67,0,163	0/1:7,4:13:67,0,175	0/1:6,3:10:62,0,135
+chr21	26911752	chr21:26911752:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:5,14:21:255,0,79	0/1:8,20:33:255,0,159
+chr21	26919217	chr21:26919217:M	TTTTTTATTTGTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:178,0,206	0/0:27,3:30:0,37,255	0/1:13,17:32:218,0,146
+chr21	26926668	chr21:26926668:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:21:255,60,0	0/1:8,6:16:78,0,89	0/1:8,16:26:221,0,64
+chr21	26941373	chr21:26941373:M	AACAGAAACAGA	<2.3>	.	.	Motif=AACAGA	GT:AD:DP:PL	1/1:0,37:37:255,111,0	0/1:16,34:50:255,0,255	0/1:25,23:48:255,0,255
+chr21	26945151	chr21:26945151:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,36:40:255,63,0	0/1:19,20:39:235,0,216	0/1:19,22:41:255,0,220
+chr21	26949137	chr21:26949137:M	ATATATATATATATATATCACACATATATCCATATATATATATCACACATATATATATATAT	<32>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,11:15:142,18,0	0/1:9,8:19:69,0,64	0/1:12,5:18:25,0,107
+chr21	26949200	chr21:26949200:M	GAGAGAGAGAGAGAGAGAGAGAGAG	<13.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,24:25:255,71,0	0/1:7,9:17:102,0,79	0/1:18,11:30:103,0,234
+chr21	26957430	chr21:26957430:M	ATAGATAGATGGATAGATGATAGATAGATAGATAGATAGATAGATAGATA	<11.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,20:20:255,59,0	0/1:8,8:16:98,0,97	0/1:10,4:14:34,0,146
+chr21	26980002	chr21:26980002:M	AAAAAAAAAAAAATAATAAAAAATAAAAAAAA	<34>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,11:22:255,201,139,199,0,138	1/2:1,8,9:19:255,130,105,114,0,98	1/2:0,3,15:19:255,255,215,54,0,9
+chr21	26986375	chr21:26986375:M	AAAACAAAACAAAACA	<4.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,27:30:255,74,0	0/1:14,17:32:255,0,255	0/1:19,14:36:255,0,255
+chr21	26987399	chr21:26987399:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,9:14:213,112,127,51,0,28	1/1:0,4,0:5:114,12,0,77,12,66	1/2:1,5,3:10:163,26,33,77,0,68
+chr21	26997705	chr21:26997705:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,39:39:255,115,0	1/1:0,40:40:255,118,0
+chr21	27012585	chr21:27012585:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7,1:9:111,9,0,90,9,110	1/2:0,2,3:6:108,56,41,27,0,15	1/2:1,2,2:5:56,16,18,11,0,30
+chr21	27015316	chr21:27015316:M	TTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:8,8:16:108,0,108	0/1:16,14:30:166,0,203	0/1:19,7:27:53,0,255
+chr21	27021023	chr21:27021023:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,11:28:254,0,191	0/1:16,12:28:247,0,255	0/1:16,12:32:255,0,255
+chr21	27029599	chr21:27029599:M	GTGTGTATGTGTGTGTGTGTGTGTGTG	<12.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,21:41:255,0,236	0/1:11,10:21:115,0,133	0/1:21,17:40:209,0,255
+chr21	27031040	chr21:27031040:M	CATTCATTCATTCATTC	<8.2>,<9.2>	.	.	Motif=CATT	GT:AD:DP:PL	1/2:0,20,15:35:255,255,188,255,0,255	1/2:0,16,17:33:255,255,213,255,0,195	1/1:0,29,0:29:255,87,0,255,86,255
+chr21	27032693	chr21:27032693:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:24:112,0,138	0/1:6,7:16:103,0,56	0/1:7,9:18:114,0,80
+chr21	27038060	chr21:27038060:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/0:30,1:31:0,73,255	0/1:18,13:32:150,0,229
+chr21	27038723	chr21:27038723:M	ATATATATATTATATATATATAT	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:18,16:34:214,0,247	0/1:12,7:19:73,0,162	0/1:22,8:30:64,0,255
+chr21	27041912	chr21:27041912:M	TTTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,0,10:23:121,184,255,0,220,168	0/0:32,0,0:34:0,96,255,99,255,255	0/1:18,19,0:38:255,0,255,255,255,255
+chr21	27042351	chr21:27042351:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,47,255	0/1:17,5:24:25,0,230	0/1:3,10:14:145,0,12
+chr21	27045046	chr21:27045046:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:26:0,75,255	0/1:14,4:22:60,0,255	0/1:5,14:21:255,0,76
+chr21	27046453	chr21:27046453:M	ACACACACACACACACACACACACACACACACACACATACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:10,0:12:0,33,255	0/1:13,15:29:255,0,255
+chr21	27048700	chr21:27048700:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,1,1:43:0,98,255,105,255,255	0/2:20,2,21:44:255,255,255,0,255,252	0/1:17,23,0:40:255,0,197,255,255,255
+chr21	27052291	chr21:27052291:M	TATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:25,0:26:0,76,255	0/1:17,14:31:170,0,226
+chr21	27059475	chr21:27059475:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/0:26,0:36:0,99,255	0/1:23,12:39:221,0,255
+chr21	27059489	chr21:27059489:M	TCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:21,11:36:156,0,255	0/1:28,8:39:79,0,255
+chr21	27061705	chr21:27061705:M	AAATAAATAAATAAATAAATAAATAAATAAA	<8.8>,<9.8>,<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,10,11,0:21:255,213,154,167,0,134,255,213,194,255	1/3:0,10,0,4:15:255,121,91,255,109,255,181,0,179,255	2/2:0,0,14,0:16:255,255,255,42,41,0,255,255,33,255
+chr21	27068129	chr21:27068129:M	CTAAAACTAAAA	<2.3>	.	.	Motif=CTAAAA	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:19,17:36:255,0,255	0/1:20,18:38:255,0,255
+chr21	27069922	chr21:27069922:M	AAGAGAAAGAGAAGGAGAA	<2.7>	.	.	Motif=AAGAGA	GT:AD:DP:PL	0/0:36,0:36:0,108,255	0/0:37,0:37:0,111,255	0/1:15,20:35:255,0,255
+chr21	27070430	chr21:27070430:M	AAAAAAAAAAAAAGAAAAGAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1,0:44:0,110,255,128,255,255	0/1:21,14,0:37:135,0,255,204,255,255	0/2:16,2,9:28:190,136,255,0,251,255
+chr21	27070466	chr21:27070466:M	AAAAAAAAAATAAGAAAAAAATAAAAAAATAAAAAATAAAAA	<43>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:9,10:20:121,0,108	0/0:25,0:25:0,74,255
+chr21	27070523	chr21:27070523:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,1:41:0,102,255	0/1:19,12:34:125,0,255	0/0:46,2:51:0,113,255
+chr21	27072946	chr21:27072946:M	TTTTTTTTTCTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:36,1:37:0,91,255	0/1:12,17:30:232,0,131
+chr21	27079287	chr21:27079287:M	TCTCGCTCTCTCTCCCTCTCTCTCTTTCTCTGTCTCTC	<20>	.	.	Motif=TC	GT:AD:DP:PL	0/0:15,2:17:0,22,170	0/1:10,12:22:92,0,66	0/0:24,4:28:0,26,255
+chr21	27084962	chr21:27084962:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:11,7:18:67,0,134	0/1:6,6:12:70,0,69
+chr21	27085793	chr21:27085793:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/1:17,13:31:147,0,208	0/0:30,1:32:0,75,255
+chr21	27086775	chr21:27086775:M	AAAAAACAAAACAAACAAACAAACAAACAAAAAAAAAA	<33>,<37>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,12:21:165,223,255,0,167,108	1/2:0,7,14:21:255,245,255,177,0,136	0/2:17,0,16:34:194,255,255,0,255,223
+chr21	27103259	chr21:27103259:M	TATATATATATATATATATATATATAT	<10.5>,<12.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:2,0,33,0:37:255,255,255,73,105,0,255,255,110,255	1/2:0,12,8,0:21:255,131,169,255,0,255,255,214,255,255	2/3:1,0,9,6:18:255,255,255,145,175,144,143,252,0,249
+chr21	27107708	chr21:27107708:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,39:40:255,99,0	0/1:21,17:38:191,0,255	0/1:14,23:38:255,0,147
+chr21	27116215	chr21:27116215:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:151,26,0	1/1:0,3:4:52,9,0	0/1:4,1:5:3,0,55
+chr21	27134124	chr21:27134124:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<17.5>,<18.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:20,0,0:22:0,63,255,66,255,255	0/1:19,19,0:39:255,0,255,255,255,255	0/2:17,1,15:34:255,245,255,0,255,255
+chr21	27136797	chr21:27136797:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/0:26,0:27:0,79,255	0/1:12,17:29:221,0,130
+chr21	27139200	chr21:27139200:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/1:18,8:26:146,0,255	0/0:27,0:28:0,84,255
+chr21	27143123	chr21:27143123:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:36:0,87,255	0/1:19,15:35:168,0,227	0/1:14,10:25:115,0,178
+chr21	27148034	chr21:27148034:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<14.5>,<22>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,10,0:11:255,33,0,255,33,255	1/2:0,19,10:32:255,255,229,255,0,255	1/2:0,14,0:18:255,47,5,255,0,255
+chr21	27149732	chr21:27149732:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47,0:47:255,138,0,255,141,255	1/2:2,21,22:45:255,255,255,255,0,255	0/1:16,26,2:46:255,0,161,255,195,255
+chr21	27151654	chr21:27151654:M	ACACACACACACACACATACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,26:26:255,77,0	0/1:19,21:40:255,0,226	0/1:15,30:45:255,0,148
+chr21	27153416	chr21:27153416:M	AGAGAGAGAGAGAGAGAGATAGAG	<13>,<16>	.	.	Motif=AG	GT:AD:DP:PL	2/2:0,0,33:36:255,255,255,107,107,0	1/2:0,12,5:17:255,129,93,212,0,255	0/2:14,0,8:23:181,222,255,0,255,255
+chr21	27155237	chr21:27155237:M	AAAACCAAACCAAAACAAACAAGAAAGAACAAAACAA	<8.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,24:24:255,72,0	0/1:7,12:19:249,0,125
+chr21	27158953	chr21:27158953:M	AAAAAAAAAAAAAGAAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:25:0,63,255	0/0:15,0:17:0,47,255	0/1:7,12:21:255,0,113
+chr21	27159918	chr21:27159918:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:37:0,100,255	0/1:12,11:25:218,0,255	0/0:33,0:34:0,101,255
+chr21	27162693	chr21:27162693:M	TTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:34:0,98,255	0/1:14,5:19:87,0,255	0/0:46,0:53:0,156,255
+chr21	27167102	chr21:27167102:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,20,112	0/1:5,6:13:80,0,45	0/0:8,1:9:0,9,118
+chr21	27167875	chr21:27167875:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:45:0,114,255	0/1:23,22:47:229,0,255	0/1:21,29:50:255,0,211
+chr21	27170090	chr21:27170090:M	GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTG	<17.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:31,0,0:31:0,93,255,92,255,255	0/1:12,15,0:27:255,0,255,255,210,255	0/2:18,0,24:42:255,255,255,0,255,210
+chr21	27171002	chr21:27171002:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:5:6,0,34	0/1:1,3:5:47,0,2	0/0:1,0:1:0,3,17
+chr21	27172720	chr21:27172720:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4,2:10:39,0,61,34,23,122	0/2:2,0,2:6:38,51,97,0,27,16	0/2:3,0,5:8:60,82,167,0,42,27
+chr21	27174600	chr21:27174600:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:21:0,54,255	0/0:15,0:15:0,45,255	0/1:15,7:24:130,0,255
+chr21	27177682	chr21:27177682:M	TTACTTACTTAC	<2>	.	.	Motif=TTAC	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:24,28:52:255,0,255	0/1:20,29:49:255,0,232
+chr21	27179550	chr21:27179550:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,1:8:3,0,159	0/0:15,0:15:0,45,255	0/1:7,7:17:151,0,146
+chr21	27182356	chr21:27182356:M	ATCTATCTATCTATCTATCTATCTATCTAT	<5.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:4,6:13:137,0,69	0/0:26,0:26:0,78,255
+chr21	27186560	chr21:27186560:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1,1:4:18,0,59,8,17,34	0/1:3,4,0:11:121,0,66,102,49,141	0/2:2,0,6:8:79,101,200,0,34,11
+chr21	27186863	chr21:27186863:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGT	<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,7:7:118,137,202,20,21,0	1/2:0,6,1:10:110,15,1,114,0,168	1/2:2,4,4:11:76,37,89,38,0,90
+chr21	27188142	chr21:27188142:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/1:13,7:21:58,0,171	0/0:32,2:38:0,47,255
+chr21	27193593	chr21:27193593:M	GAGAGAGAGAGAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,28:29:255,87,0	1/1:0,28:28:255,84,0
+chr21	27194368	chr21:27194368:M	AAAAAAAAAAAAAAGCAAAAAACAAAAGAACAAAAAACAAAACAAACAAAAAAAA	<60>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:72,9,0	1/1:0,2:4:79,11,0	1/1:0,4:5:128,15,0
+chr21	27198459	chr21:27198459:M	TTCTTTCTTTATTCTTTTTTTCTT	<6.8>	.	.	Motif=TTCT	GT:AD:DP:PL	1/1:0,6:6:252,18,0	1/1:0,11:11:255,33,0	1/1:0,13:13:255,39,0
+chr21	27198602	chr21:27198602:M	ATTATTATTATTATTATT	<6.3>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:27,15:44:0,6,59	0/1:22,18:46:6,0,43	0/0:41,0:45:0,76,202
+chr21	27198618	chr21:27198618:M	TTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,14:42:255,0,255	0/1:19,14:36:255,0,255	0/0:39,0:41:0,118,255
+chr21	27223734	chr21:27223734:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:47:0,119,255	0/0:33,0:35:0,102,255	0/1:19,16:37:185,0,238
+chr21	27228563	chr21:27228563:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,33:34:255,99,0	1/1:0,36:36:255,106,0
+chr21	27233281	chr21:27233281:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<17>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/0:28,0:29:0,85,255	0/1:13,15:28:189,0,152
+chr21	27238205	chr21:27238205:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:32,0:33:0,98,255	0/0:46,0:46:0,135,255	0/1:19,25:44:255,0,227
+chr21	27249823	chr21:27249823:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:10,12:23:141,0,108	0/0:20,0:22:0,64,255
+chr21	27259481	chr21:27259481:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:34:130,0,255	0/0:16,0:18:0,52,255	0/0:24,0:25:0,73,255
+chr21	27260895	chr21:27260895:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<11.8>,<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,10,15:25:255,255,212,162,0,117	1/1:0,7,0:7:126,21,0,126,21,126	2/2:0,0,18:18:255,255,255,54,53,0
+chr21	27277660	chr21:27277660:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,19:23:255,58,0	1/1:0,24:28:255,82,0
+chr21	27278342	chr21:27278342:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,30:32:255,57,0	1/1:1,25:26:255,59,0	1/1:1,25:26:255,58,0
+chr21	27279983	chr21:27279983:M	TTTTTAATTTTTATTTTATTATTATTATTATTATTATTATTATTATTATTATTATT	<6.3>,<6.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	1/1:0,26,0:28:255,78,0,255,70,255	1/1:0,13,0:14:255,39,0,185,35,149	1/2:0,11,10:24:255,119,56,132,0,70
+chr21	27283284	chr21:27283284:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:10:217,3,0	1/1:0,5:6:133,15,0	1/1:0,5:6:134,15,0
+chr21	27289363	chr21:27289363:M	ATATATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:0,44:44:255,130,0	1/1:0,42:43:255,126,0
+chr21	27291239	chr21:27291239:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,21:36:255,0,169	0/0:19,3:23:0,15,255	0/1:15,14:30:174,0,180
+chr21	27297370	chr21:27297370:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,5:22:255,80,29,255,0,253	1/1:0,30,2:34:255,96,0,255,64,255	1/2:1,11,12:24:255,166,157,180,0,130
+chr21	27298892	chr21:27298892:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:11:87,0,12	0/1:4,9:15:111,0,30	0/1:2,2:4:21,0,21
+chr21	27300538	chr21:27300538:M	TTTTTTATTTTTATTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,25:47:255,0,255	1/1:0,30:30:255,88,0	0/1:16,26:42:255,0,176
+chr21	27303089	chr21:27303089:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:31:174,0,220	0/0:33,0:34:0,100,255	0/1:20,27:47:255,0,229
+chr21	27312623	chr21:27312623:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:38,0,16	1/1:0,2:3:46,9,0	0/1:0,1:5:8,0,18
+chr21	27321410	chr21:27321410:M	TATCTATCATCTATCTTATCTATCTATCTATCTATCTATCTATCATCTATCTATCCACCTACCTATCTATC	<19.8>,<20.8>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,0,6:6:174,131,116,18,18,0	1/1:0,4,0:4:115,12,0,83,12,73	2/2:0,0,2:2:58,43,38,6,6,0
+chr21	27321658	chr21:27321658:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,37:38:255,111,0	1/1:0,40:40:255,120,0
+chr21	27322683	chr21:27322683:M	TGTGTGTGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,26:26:255,78,0	1/1:0,33:35:255,105,0
+chr21	27329320	chr21:27329320:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,49:49:255,144,0	1/1:0,41:41:255,121,0
+chr21	27330242	chr21:27330242:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:109,12,0	.	1/1:0,1:1:42,3,0
+chr21	27333318	chr21:27333318:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,30:53:255,255,255,255,0,255	1/1:0,31,1:32:255,94,0,255,76,255	1/2:0,26,21:47:255,255,252,255,0,255
+chr21	27335847	chr21:27335847:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:10:81,0,18	0/0:10,0:11:0,32,180	0/1:2,7:9:96,0,9
+chr21	27337467	chr21:27337467:M	TATATATATATATATATATATATA	<8>,<9>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,18,9:28:255,168,86,255,0,255	2/2:0,3,21:24:255,255,255,72,17,0	1/2:0,13,17:30:255,255,222,236,0,149
+chr21	27338345	chr21:27338345:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	.	1/2:0,2,3:5:139,47,33,32,0,17	1/1:0,3,0:5:114,15,0,82,14,72
+chr21	27348281	chr21:27348281:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:229,43,0	0/1:8,9:22:117,0,60	1/1:0,18:19:255,52,0
+chr21	27357584	chr21:27357584:M	AAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,108,0	0/1:22,22:46:255,0,255	1/1:0,32:33:255,99,0
+chr21	27364791	chr21:27364791:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:32:255,48,0	0/1:18,21:41:255,0,207	1/1:1,38:40:255,99,0
+chr21	27365015	chr21:27365015:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14,3:19:255,55,0,255,3,215	0/1:7,10,0:20:230,0,173,160,182,255	1/2:0,10,7:20:255,119,65,188,0,139
+chr21	27368218	chr21:27368218:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:86,9,0	0/1:1,0:5:5,0,32	1/1:0,4:5:128,15,0
+chr21	27369620	chr21:27369620:M	TTTTATTTTTATTTTATTTTATTTTATTTTATTTATTTTATTTTATTTTATTTTAT	<12.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,9:9:173,27,0	0/1:5,2:7:16,0,70	1/1:0,12:12:225,35,0
+chr21	27380980	chr21:27380980:M	TGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,28:35:255,92,0	0/1:16,7:24:134,0,255	1/1:0,27:32:255,95,0
+chr21	27380998	chr21:27380998:M	TATATATATATATATATATA	<12>	.	.	Motif=TA	GT:AD:DP:PL	0/0:24,0:27:0,80,255	0/0:20,0:21:0,63,255	0/1:18,12:33:177,0,255
+chr21	27384274	chr21:27384274:M	AAATAAAATAAAAT	<1.8>	.	.	Motif=AAATA	GT:AD:DP:PL	1/1:0,45:45:255,133,0	0/1:17,19:36:239,0,203	0/1:23,26:49:255,0,255
+chr21	27385910	chr21:27385910:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:44,8,0	0/1:2,1:3:8,0,24	1/1:0,9:9:153,26,0
+chr21	27388054	chr21:27388054:M	TATATATAGTATATAGTATATATAGTTATATAGTATTATTATATA	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:36,4:40:3,0,255	0/1:6,4:10:92,0,125	0/1:23,8:31:151,0,255
+chr21	27389584	chr21:27389584:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:83,0,102	0/1:5,2:8:11,0,73	1/1:0,12:13:222,38,0
+chr21	27393482	chr21:27393482:M	AAAAACAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAGAAGAAAAAGAAAAAAAAA	<76>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:49,9,0	1/1:0,1:2:16,3,0	0/0:2,0:2:0,6,32
+chr21	27400982	chr21:27400982:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,3,12	1/1:0,5:7:184,21,0	1/1:0,0:2:9,1,0
+chr21	27404660	chr21:27404660:M	ATACATACACACACACATACATAC	<5.5>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:47,0:47:0,141,255	0/1:16,17:33:255,0,255	0/1:26,19:45:255,0,255
+chr21	27405018	chr21:27405018:M	ACACACACACACACACACACACACACAC	<13>,<15>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,20,13,0:34:255,217,255,255,0,255,255,255,255,255	1/3:0,19,0,12:34:255,255,255,255,255,255,255,0,255,255	2/3:2,0,16,3:21:255,255,255,50,79,31,233,255,0,255
+chr21	27407722	chr21:27407722:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,28:29:255,84,0	1/1:1,30:31:255,67,0
+chr21	27407829	chr21:27407829:M	TATATATTATATAAAATATGTATATATAAATAATATATATTATACATAATATTATA	<29>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,11:11:215,33,0	1/1:0,3:3:55,9,0	1/1:0,12:12:228,35,0
+chr21	27411879	chr21:27411879:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,3:6:124,17,0	1/1:0,2:2:57,6,0
+chr21	27412866	chr21:27412866:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,102,0	0/1:18,14:35:255,0,255	0/1:21,23:46:255,0,255
+chr21	27419850	chr21:27419850:M	AAATAAATAAATAAATAAATAAATAAATAA	<6.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,39:40:255,118,0	1/1:0,35:35:255,103,0	1/1:0,33:33:255,97,0
+chr21	27421161	chr21:27421161:M	TTTTTTTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,18:20:255,41,0	0/1:2,7:10:92,0,22	0/1:2,7:9:99,0,9
+chr21	27421335	chr21:27421335:M	TTTTCTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,12:21:255,226,255,145,0,170	1/2:3,15,9:29:255,117,186,224,0,255	2/2:2,0,19:21:255,255,255,26,57,0
+chr21	27424968	chr21:27424968:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:120,0,150	0/1:3,9:13:209,0,44	0/1:2,5:10:124,0,34
+chr21	27425068	chr21:27425068:M	TTGTTATTGTTGTTGTTCGTTG	<8.3>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,21:22:255,55,0	0/1:16,15:32:174,0,194	1/1:0,24:25:255,73,0
+chr21	27425091	chr21:27425091:M	TTTCTTTCTTTCCTCTTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCTTTCTT	<4.2>,<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/2:6,0,8:14:55,73,208,0,135,113	0/0:12,0,2:15:0,36,255,18,255,255	0/1:5,8,4:22:161,0,88,140,76,241
+chr21	27425193	chr21:27425193:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTCTTTTCTTTTCTTT	<33.8>	.	.	Motif=CTTT	GT:AD:DP:PL	1/1:0,8:8:95,22,0	1/1:0,2:7:23,5,0	1/1:0,4:7:47,11,0
+chr21	27426776	chr21:27426776:M	GTGTGTGTGTGTGTGTGTGTGT	<12>,<14>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,19,0:36:255,0,218,255,255,255	0/2:24,0,24:50:255,255,255,0,255,255	0/1:22,14,0:36:154,0,255,255,255,255
+chr21	27429363	chr21:27429363:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,9:25:109,0,142	0/1:15,24:44:255,0,111	1/1:1,35:43:255,107,0
+chr21	27431644	chr21:27431644:M	AAAAAAAAAAAAAAAAA	<11>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,7:23:62,129,255,0,255,220	1/2:3,23,5:31:255,35,94,255,0,255	0/0:24,0,1:27:0,80,255,61,255,255
+chr21	27431810	chr21:27431810:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:12:1,0,134	0/0:28,1:29:0,68,255	0/1:7,8:16:103,0,77
+chr21	27444341	chr21:27444341:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:21:104,0,150	0/0:16,0:16:0,47,255	1/1:2,15:17:234,14,0
+chr21	27445915	chr21:27445915:M	TAGATGGATACATAGGTAGACACATAGATAGATACATAGATA	<11.5>,<12.5>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:1,13,2:16:228,29,0,183,12,200	1/1:1,17,0:18:255,36,0,255,52,255	2/2:0,0,15:15:255,255,255,45,44,0
+chr21	27447655	chr21:27447655:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,22,9,0:35:255,255,196,255,0,255,255,174,255,255	2/3:0,0,5,6:11:255,255,255,100,100,68,83,83,0,51	1/3:0,12,0,5:17:255,135,99,255,85,255,255,0,255,255
+chr21	27451701	chr21:27451701:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,29:33:255,57,0	1/1:0,33:34:255,97,0	1/1:2,33:37:255,72,0
+chr21	27457671	chr21:27457671:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1,0:20:0,40,255,59,255,255	0/1:19,22,0:41:255,0,216,255,255,255	0/2:22,0,13:36:142,241,255,0,255,255
+chr21	27459419	chr21:27459419:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:34:255,82,0	0/1:13,20:35:255,0,122	1/1:2,37:41:255,84,0
+chr21	27462244	chr21:27462244:M	ACACACACACACACACACACAC	<10.5>,<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:3,0,24:30:255,255,255,0,41,1	0/2:15,0,11:27:225,255,255,0,181,255	1/2:1,27,13:44:255,255,255,255,0,255
+chr21	27463499	chr21:27463499:M	ACACACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:19:255,54,0	0/1:18,22:40:255,0,255	0/1:19,16:36:255,0,255
+chr21	27465654	chr21:27465654:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:24:0,69,255	0/0:17,0:19:0,54,255	0/1:13,8:25:148,0,255
+chr21	27466676	chr21:27466676:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,48:48:255,142,0	0/1:26,29:55:255,0,255	1/1:0,49:49:255,144,0
+chr21	27471190	chr21:27471190:M	AAAAAAAATACAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5,0:16:47,0,163,81,207,255	0/1:10,12,0:22:150,0,115,180,177,255	0/2:7,0,7:14:157,127,218,0,127,160
+chr21	27473868	chr21:27473868:M	CACACAGACACACACACACACACACACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:27,0:27:0,79,255	0/1:14,15:31:187,0,187
+chr21	27480671	chr21:27480671:M	ACACCACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39:40:255,109,0	0/1:8,15:23:192,0,71	0/1:16,16:33:191,0,192
+chr21	27486540	chr21:27486540:M	ATATACATACATATATATATGTATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/0:27,0:27:0,81,255	0/1:8,15:24:255,0,151
+chr21	27488619	chr21:27488619:M	TTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,2:7:176,34,14,85,0,66	0/2:4,0,3:8:63,49,148,0,110,104	1/1:0,3,0:3:83,9,0,59,9,51
+chr21	27492969	chr21:27492969:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/0:31,0:31:0,93,255	0/1:15,7:23:136,0,255
+chr21	27496900	chr21:27496900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,10:21:110,0,127	0/0:12,0:12:0,35,197	0/1:9,9:19:104,0,97
+chr21	27501207	chr21:27501207:M	TTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:21:47,0,255	0/1:15,5:20:59,0,255	0/1:20,6:28:84,0,255
+chr21	27501555	chr21:27501555:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,38:40:255,81,0	1/1:0,38:39:255,114,0	0/1:26,14:40:138,0,255
+chr21	27503971	chr21:27503971:M	ACACACACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:2,10,4,0:16:255,34,97,234,0,255,255,126,255,255	2/3:0,0,9,4:13:232,255,255,105,106,75,147,237,0,218	1/2:2,12,7,0:22:255,85,170,255,0,255,255,204,255,255
+chr21	27509416	chr21:27509416:M	ACACACACACACACACACACACACACACACACACACAC	<18>,<21>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,11:25:255,255,255,250,0,255	1/1:1,20,0:24:255,30,0,255,48,255	0/2:11,0,9:21:199,238,255,0,193,252
+chr21	27514789	chr21:27514789:M	ACACACACACACACACATACACAC	<11>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,19:38:255,0,254	0/0:37,2:39:0,78,255	0/1:21,25:46:255,0,255
+chr21	27522644	chr21:27522644:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7:8:215,22,0	.	1/1:0,0:3:4,2,0
+chr21	27523022	chr21:27523022:M	AATAATAATAATAATAATAATA	<8.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:20,13:33:154,0,255	0/1:17,12:30:130,0,230	0/0:22,0:23:0,67,255
+chr21	27529516	chr21:27529516:M	TTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:170,21,0	0/1:3,11:14:255,0,39	.
+chr21	27531879	chr21:27531879:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:4:0,9,70	0/1:3,1:7:37,0,51	0/1:3,3:7:53,0,51
+chr21	27540985	chr21:27540985:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,110,0	1/1:0,47:47:255,138,0	0/1:25,17:42:196,0,255
+chr21	27541214	chr21:27541214:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:41,0,6	0/1:6,3:9:24,0,75	0/1:6,2:9:9,0,88
+chr21	27552656	chr21:27552656:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:1,25:27:255,61,0	0/1:20,13:34:135,0,255
+chr21	27558016	chr21:27558016:M	ACACACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,5:25:33,0,255	0/1:11,16:27:208,0,116	0/0:31,1:33:0,66,255
+chr21	27559114	chr21:27559114:M	TTTTATTCTATTTTATTTTATTTTATTTTATTTTAT	<4.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:16,27:43:255,0,255	0/0:33,0:33:0,99,255	0/1:8,22:30:255,0,131
+chr21	27561187	chr21:27561187:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:9:9,0,97	0/1:6,3:11:31,0,73	0/0:19,1:22:0,46,255
+chr21	27567038	chr21:27567038:M	ATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:51,1:52:0,135,255	0/1:14,10:24:109,0,181	0/0:35,2:37:0,72,255
+chr21	27587785	chr21:27587785:M	TATATATATTATATTATGTGACATATATTTTATATATATTATATATATATA	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:19,4:24:53,0,255	0/1:4,1:5:10,0,84	0/1:5,3:8:52,0,100
+chr21	27590230	chr21:27590230:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:37:255,0,163	1/1:4,37:42:255,52,0	0/1:13,17:30:224,0,150
+chr21	27594389	chr21:27594389:M	TGGTTGGTTGGTTGGTTG	<5.5>	.	.	Motif=TGGT	GT:AD:DP:PL	0/1:23,12:35:130,0,255	1/1:0,47:47:255,138,0	0/0:39,0:39:0,115,255
+chr21	27606894	chr21:27606894:M	TTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTTGT	<16>,<17.7>,<19.3>	.	.	Motif=TTG	GT:AD:DP:PL	1/3:0,11,0,9:20:255,250,217,255,250,255,255,0,255,255	1/1:0,17,0,0:17:255,51,0,255,51,255,255,51,255,255	2/3:0,0,8,10:18:255,255,255,255,255,253,225,225,0,195
+chr21	27607235	chr21:27607235:M	TCTTTTTCTTTTTTTTTT	<3.2>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/1:23,17:40:230,0,255	1/1:2,44:46:255,96,0	0/0:35,0:35:0,104,255
+chr21	27608798	chr21:27608798:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,9,0,10:19:255,255,241,255,182,255,242,0,163,209	2/3:0,2,12,11:25:255,255,255,193,157,121,226,143,0,158	1/1:0,20,0,0:23:255,65,0,255,65,255,255,66,255,255
+chr21	27610328	chr21:27610328:M	TTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,6:22:255,158,110,255,0,255	1/2:0,2,10:16:255,255,255,58,0,17	1/1:1,24,0:32:255,48,0,255,89,255
+chr21	27627474	chr21:27627474:M	ATATATATATCTTTATATATATATATATATATAT	<16>,<23>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,4:15:245,101,69,169,0,255	1/1:0,3,0:3:49,9,0,57,9,86	1/2:0,5,3:8:146,77,62,83,0,149
+chr21	27628596	chr21:27628596:M	TATACATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,17,16:34:255,255,213,255,0,232	1/2:0,10,21:31:255,255,255,181,0,90	1/2:0,12,17:29:255,255,236,224,0,140
+chr21	27629606	chr21:27629606:M	AAAATAAATAAATAAATAAATAATAAAAATAAGAATAAAAATAAAAAT	<8.7>	.	.	Motif=AAAATA	GT:AD:DP:PL	0/1:12,5:17:122,0,255	0/1:4,7:11:209,0,70	0/1:13,9:22:242,0,255
+chr21	27647985	chr21:27647985:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<6.8>,<8.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,10,15:25:255,255,255,255,0,255	1/2:0,14,17:32:255,255,255,255,0,255	1/2:0,24,14:38:255,255,255,255,0,255
+chr21	27655297	chr21:27655297:M	TTCTTTTTTCTTTTTTCTTTTCTTTTCTTCTTCTTTTTTTTTTTT	<8>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:9,8:17:103,0,122	0/1:9,11:20:138,0,103	0/1:12,13:25:168,0,150
+chr21	27663587	chr21:27663587:M	AAACAAACAAAC	<3.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:37,13:52:206,0,255	0/1:22,25:49:255,0,255	0/1:15,18:33:255,0,255
+chr21	27665678	chr21:27665678:M	TTTTTTTTTTTATTTTGTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:152,0,170	0/1:20,16:36:178,0,248	0/1:19,16:36:188,0,252
+chr21	27676113	chr21:27676113:M	AAAAAAAAAAATAAAATAAAATAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,21:32:255,0,85	0/1:5,14:21:197,0,37	0/1:7,13:20:180,0,69
+chr21	27688423	chr21:27688423:M	TCTCCCTCTCTCTCTCTCTCTCT	<10.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,14:30:180,0,218	0/1:18,10:28:98,0,242	0/1:17,10:27:107,0,238
+chr21	27694000	chr21:27694000:M	AAAATAAAAATAAA	<2.5>	.	.	Motif=AAAATA	GT:AD:DP:PL	0/1:18,16:34:255,0,255	0/0:38,0:38:0,114,255	0/1:27,25:52:255,0,255
+chr21	27695616	chr21:27695616:M	TCTCTTTCTCTT	<1.3>	.	.	Motif=TCTCTT	GT:AD:DP:PL	0/1:15,21:36:255,0,255	0/1:13,19:32:255,0,255	0/1:9,17:27:255,0,174
+chr21	27714523	chr21:27714523:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,7:24:6,0,101	0/0:9,1:10:0,16,75	0/0:15,1:17:0,34,142
+chr21	27714551	chr21:27714551:M	TATATATATATATATATATA	<11>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:2,19,8:29:255,67,12,143,0,156	1/2:3,11,7:21:181,44,21,62,0,96	1/2:1,14,7:22:235,67,19,110,0,107
+chr21	27714655	chr21:27714655:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,13:16:255,39,0	1/1:0,17:20:255,51,0	1/1:0,16:21:255,19,0
+chr21	27741987	chr21:27741987:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,28:30:255,70,0	1/1:1,33:34:255,82,0
+chr21	27761385	chr21:27761385:M	AAAGAAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<16.8>,<20.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/2:0,9,3:13:255,75,48,235,0,229	2/2:0,0,5:5:140,142,144,15,15,0	1/2:0,8,1:9:231,25,1,209,0,209
+chr21	27769825	chr21:27769825:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,10:12:255,210,183,33,32,0	1/2:0,4,10:14:255,163,123,66,0,25	1/2:0,2,8:10:255,134,106,34,0,4
+chr21	27772078	chr21:27772078:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:40:255,112,0	1/1:0,33:33:255,97,0	1/1:0,31:32:255,91,0
+chr21	27781493	chr21:27781493:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,20:45:246,0,255	0/1:30,20:50:209,0,255	0/0:40,1:41:0,102,255
+chr21	27782690	chr21:27782690:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,23:47:255,255,255,255,0,255	2/2:0,2,34:40:255,255,255,113,81,0	1/2:1,25,16:44:255,255,186,255,0,255
+chr21	27784992	chr21:27784992:M	ACACACACACACACACACACACACACACACACACAAACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,20:22:255,64,0	0/1:14,13:29:157,0,156	1/1:0,29:30:255,88,0
+chr21	27786346	chr21:27786346:M	TGTGTGCGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,28:28:255,82,0	1/1:0,43:43:255,127,0
+chr21	27793653	chr21:27793653:M	TATATATATATATATATATATATATATATATAT	<12.5>,<13.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,13,12:26:255,255,255,215,224,152,230,197,0,158	1/2:0,4,2,0:7:179,34,14,79,0,61,154,29,78,145	1/3:0,8,0,7:16:255,187,173,255,130,228,214,0,138,188
+chr21	27797322	chr21:27797322:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>,<21.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,11,0:20:255,192,134,158,0,99,255,191,158,255	1/3:0,9,0,5:15:255,149,121,255,133,251,255,0,147,237	2/3:0,0,8,6:14:255,255,255,160,159,132,211,135,0,189
+chr21	27801363	chr21:27801363:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/0:37,0:37:0,108,255	0/1:12,13:26:159,0,141
+chr21	27804074	chr21:27804074:M	TTATTTATTTATTTATTTATTTATTTATTTATTTA	<7.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:11,23:34:255,0,112	0/1:16,18:34:227,0,191	0/0:30,0:30:0,89,255
+chr21	27804852	chr21:27804852:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,34:34:255,100,0	1/1:0,39:40:255,118,0
+chr21	27810529	chr21:27810529:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,21,0:22:255,64,0,255,64,255	0/1:9,11,0:21:255,0,185,255,229,255	1/2:0,5,6:12:255,162,147,127,0,111
+chr21	27811041	chr21:27811041:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:11,14:25:170,0,118	0/0:37,3:41:0,67,255
+chr21	27811592	chr21:27811592:M	CACACACACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/0:43,0:44:0,130,255	0/1:19,30:50:255,0,214	0/1:18,21:39:255,0,222
+chr21	27815912	chr21:27815912:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:29:0,83,255	0/1:16,12:29:121,0,199	0/0:35,0:37:0,108,255
+chr21	27817799	chr21:27817799:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19,3:22:255,57,0,255,10,255	1/2:0,8,9:17:255,130,106,137,0,89	1/1:0,27,1:29:255,84,0,255,67,255
+chr21	27820032	chr21:27820032:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTACTTACTTATTT	<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:0,10:13:204,35,0	1/1:0,14:14:255,41,0
+chr21	27824230	chr21:27824230:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:12:208,35,0	1/1:0,11:13:210,38,0	1/1:0,15:15:255,44,0
+chr21	27827116	chr21:27827116:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:31:0,90,255	0/0:20,0:22:0,65,255	0/1:16,13:32:255,0,255
+chr21	27829055	chr21:27829055:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,72,255	0/0:30,0:33:0,95,255	0/1:18,7:27:107,0,255
+chr21	27836791	chr21:27836791:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,30	0/1:1,1:5:43,0,18	1/1:0,4:4:116,12,0
+chr21	27837650	chr21:27837650:M	AAAAAAAAAAAAAGAAAAGAAAAGAAAACAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:21,0,133	0/1:9,10:20:117,0,110	1/1:1,20:21:255,44,0
+chr21	27849622	chr21:27849622:M	TTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,15,128	0/0:9,0:12:0,33,255	1/1:0,18:20:255,28,0
+chr21	27851002	chr21:27851002:M	TTTTTTTTTTTTT	<11>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:21,1,14:37:172,212,255,0,255,255	0/2:18,3,22:43:255,255,255,0,255,196	1/2:0,21,26:47:255,255,255,255,0,255
+chr21	27854747	chr21:27854747:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,2:24:0,24,255	0/1:19,4:24:0,0,255	0/1:13,14:29:185,0,151
+chr21	27859465	chr21:27859465:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:6:55,0,0	0/1:1,0:3:13,0,8	0/0:6,0:6:0,18,101
+chr21	27863795	chr21:27863795:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,22:44:255,0,255	0/1:20,29:49:255,0,213	0/1:23,23:46:255,0,255
+chr21	27866101	chr21:27866101:M	CACACACACATGCACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,32:32:255,94,0	1/1:0,37:37:255,109,0
+chr21	27873205	chr21:27873205:M	CCCCCCCCCCC	<10>,<12>	.	.	Motif=C	GT:AD:DP:PL	0/1:12,13,0:25:167,0,149,237,188,255	0/1:18,13,0:31:137,0,224,224,255,255	0/2:10,1,11:22:133,176,255,0,134,127
+chr21	27879186	chr21:27879186:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/0:38,0:38:0,114,255	0/1:20,22:43:255,0,255
+chr21	27881675	chr21:27881675:M	TTTTTTTTTTTTCTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,14,0:31:174,0,231,255,255,255	0/0:22,0,0:22:0,65,255,65,255,255	1/2:0,13,17:30:255,255,255,235,0,255
+chr21	27888391	chr21:27888391:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:18:47,0,255	0/1:10,1:15:32,0,254	0/1:9,7:18:173,0,215
+chr21	27894287	chr21:27894287:M	GTGTGTGTGTGTGTGTGTGT	<12>,<13>	.	.	Motif=GT	GT:AD:DP:PL	0/1:21,14,1:36:255,0,255,241,255,255	0/2:13,1,13:27:255,211,255,0,255,255	1/2:0,22,15:37:255,255,167,255,0,255
+chr21	27902942	chr21:27902942:M	AAAAAAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5,0:9:159,0,52,146,66,199	0/1:1,3,0:7:75,0,61,60,37,98	1/2:1,3,3:9:137,43,80,36,0,57
+chr21	27903765	chr21:27903765:M	ATATATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,18:39:225,0,141	0/1:15,22:39:245,0,116	1/1:0,45:45:255,130,0
+chr21	27904539	chr21:27904539:M	GAGGGAGGGAGGGA	<4.5>	.	.	Motif=GAGG	GT:AD:DP:PL	0/1:23,16:39:78,0,159	0/0:20,6:26:0,2,158	0/1:35,16:51:45,0,255
+chr21	27908706	chr21:27908706:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:122,21,0	0/1:4,7:14:92,0,33	0/0:0,0:2:0,0,1
+chr21	27910087	chr21:27910087:M	TAGTAGTAGTAGTAGTA	<6.7>	.	.	Motif=TAG	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:37,0:37:0,109,255	0/1:25,13:38:134,0,255
+chr21	27911651	chr21:27911651:M	AAAAAAACAAAAAACAAAACAAAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:31,0:33:0,96,255	0/1:21,9:30:76,0,255
+chr21	27920809	chr21:27920809:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,3,30	0/1:1,0:2:10,0,21	0/1:5,3:10:55,0,132
+chr21	27932757	chr21:27932757:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2,0:4:48,0,20,35,17,44	1/1:0,3,0:5:98,12,0,72,12,63	1/2:0,2,6:9:147,85,76,44,0,20
+chr21	27940508	chr21:27940508:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,3:7:68,0,78	1/1:0,9:11:255,32,0	0/0:16,0:17:0,51,255
+chr21	27943150	chr21:27943150:M	ATTATTATTATTATTATT	<8>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,17:40:255,0,255	0/0:37,0:40:0,119,255	0/1:19,12:35:183,0,255
+chr21	27945556	chr21:27945556:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,4:7:63,0,16	0/1:1,3:5:48,0,3	0/1:7,5:13:50,0,95
+chr21	27946687	chr21:27946687:M	TTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:25:255,75,0	1/1:0,23:26:255,78,0	0/1:3,12:17:255,0,63
+chr21	27948655	chr21:27948655:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:8:127,15,0	1/1:0,5:7:152,18,0	0/1:4,1:6:13,0,97
+chr21	27948988	chr21:27948988:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:9:197,24,0	1/1:0,13:13:255,39,0	0/1:13,2:19:11,0,255
+chr21	27951397	chr21:27951397:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:16:174,6,0	0/1:5,6:11:71,0,53	0/0:18,1:19:0,38,255
+chr21	27955149	chr21:27955149:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,5:18:89,0,255	0/1:7,6:16:125,0,168	0/0:12,0:14:0,31,255
+chr21	27958196	chr21:27958196:M	ACACACACACACACACACACACACACACACACACAC	<24>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,5:17:89,0,255	0/1:12,5:22:86,0,255	0/1:17,4:25:66,0,255
+chr21	27963693	chr21:27963693:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:24:203,0,255	0/1:9,15:29:255,0,172	0/1:9,13:22:255,0,179
+chr21	27966629	chr21:27966629:M	CACACACACACACACACACACACACACGCACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,14:24:190,0,117	0/1:20,16:36:177,0,248	0/1:14,16:30:203,0,168
+chr21	27970738	chr21:27970738:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,16:30:204,0,151	0/1:8,10:19:116,0,93	0/1:13,9:23:93,0,172
+chr21	27977886	chr21:27977886:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:57,0,3	0/0:6,1:7:0,3,85	0/1:1,6:10:87,0,11
+chr21	28000880	chr21:28000880:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,64,0	1/1:0,7:10:140,26,0	1/1:1,13:14:211,23,0
+chr21	28007950	chr21:28007950:M	TTGTTGTTGTTTGTTTGTTTTTGTTGTTGTTGTTATTGTTG	<14>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:29,12:46:0,15,114	0/1:25,14:40:3,0,74	0/0:27,9:38:0,19,109
+chr21	28009794	chr21:28009794:M	CACACACACACACACACATTCTAGATACCCACACACATACACACATAAACACACACACACACACACACACACACA	<33.5>,<36.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:3,11,6:20:255,45,149,230,0,249	0/1:5,2,2:10:29,0,139,11,34,61	0/1:4,7,2:13:157,0,99,144,30,186
+chr21	28009932	chr21:28009932:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTGTGT	<25>	.	.	Motif=TG	GT:AD:DP:PL	0/0:15,0:18:0,43,213	0/1:7,12:20:112,0,43	0/0:15,0:15:0,43,210
+chr21	28020603	chr21:28020603:M	AGAGAGAGAGAGA	<8.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:21,14:35:255,0,255	0/1:17,17:35:255,0,255	0/1:17,9:26:215,0,255
+chr21	28027198	chr21:28027198:M	TTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:26:175,0,255	0/1:17,7:29:143,0,255	0/1:12,4:20:76,0,255
+chr21	28034621	chr21:28034621:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,13:28:160,0,198	0/1:20,10:32:93,0,255	0/1:21,19:40:228,0,255
+chr21	28051047	chr21:28051047:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:12:95,0,48	1/1:1,13:15:220,26,0	0/0:16,0:17:0,50,255
+chr21	28051175	chr21:28051175:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATATAAAATATATATATA	<19.5>,<25.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,6:9:231,231,231,26,26,0	2/2:0,0,1:3:59,59,59,9,9,0	1/1:0,3,0:3:94,9,0,94,9,94
+chr21	28053599	chr21:28053599:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<22>,<24>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,16,0:32:255,0,255,255,255,255	1/2:0,8,6:18:255,164,128,225,0,198	0/1:13,4,0:20:78,0,255,119,255,255
+chr21	28055573	chr21:28055573:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<13>,<15>	.	.	Motif=GT	GT:AD:DP:PL	0/3:14,0,0,13:27:167,244,255,243,255,255,0,255,225,186	2/3:1,0,17,9:27:255,255,255,142,246,189,255,255,0,255	0/1:12,17,0,1:30:255,0,255,255,226,255,255,200,255,255
+chr21	28056344	chr21:28056344:M	AAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,16,1:30:255,0,248,255,255,255	1/1:0,23,0:25:255,74,0,255,73,255	0/2:18,1,21:40:255,255,255,0,255,255
+chr21	28058283	chr21:28058283:M	TGTTTTTTTTTGTTTGTTTGTTTGTTT	<7>	.	.	Motif=TGTT	GT:AD:DP:PL	0/1:13,15:28:255,0,214	1/1:1,33:34:255,79,0	0/1:14,11:25:177,0,248
+chr21	28064292	chr21:28064292:M	AAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,3:22:24,73,255,0,255,255	2/2:0,0,11:13:255,255,255,38,36,0	0/1:7,9,0:18:206,0,160,233,193,255
+chr21	28066426	chr21:28066426:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,2:39:0,78,255	0/0:29,0:31:0,90,255	0/1:26,15:44:170,0,255
+chr21	28066490	chr21:28066490:M	AAAAAAAAAAGAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,25:41:255,0,186	1/1:0,33:33:255,97,0	0/1:25,16:41:181,0,255
+chr21	28071269	chr21:28071269:M	AAATAAATAAATAAATAAATAAATAAATA	<8.2>,<9.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,24,0:24:255,71,0,255,71,255	1/1:0,20,0:20:255,59,0,255,59,255	1/2:0,15,7:23:255,131,68,241,0,220
+chr21	28077985	chr21:28077985:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,3:44:0,73,255	0/1:24,26:52:255,0,255	0/0:37,4:43:0,53,255
+chr21	28079036	chr21:28079036:M	CACACACACACACACACACACACACACACACACACACACACACACACACAGACGCACATACACACA	<26>,<28>,<30>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,3,5:8:255,249,244,146,146,132,95,90,0,75	1/2:0,6,10,0:16:255,255,255,172,0,134,255,255,172,255	3/3:0,0,0,10:11:255,255,255,255,255,255,33,33,30,0
+chr21	28081085	chr21:28081085:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:17:0,31,255	0/1:11,6:18:51,0,147	0/0:18,3:24:0,16,255
+chr21	28094804	chr21:28094804:M	AGATAGATAGATAGATAGATAGATAGACAGACAGACAGACAGACAGATAGAT	<13.2>	.	.	Motif=AGAT	GT:AD:DP:PL	1/1:0,16:16:146,40,0	1/1:0,21:22:191,52,0	1/1:0,22:22:201,55,0
+chr21	28098537	chr21:28098537:M	TTTATTTATTTAATTTTTTTAATTTA	<5.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:37,0:39:0,109,255	0/1:15,13:32:165,0,201	0/0:29,0:32:0,85,255
+chr21	28101323	chr21:28101323:M	AATATTAATATTA	<2.7>	.	.	Motif=AATATT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:5,5:10:109,0,111	0/0:28,0:28:0,84,255
+chr21	28106215	chr21:28106215:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,17:36:212,0,249	0/0:16,0:16:0,47,255	0/1:30,28:58:255,0,255
+chr21	28106678	chr21:28106678:M	TTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:23,12:37:237,0,255	0/0:41,0:41:0,123,255
+chr21	28114773	chr21:28114773:M	TATATATATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,22:38:255,0,255	0/0:25,0:27:0,75,255	0/1:12,25:39:255,0,210
+chr21	28114796	chr21:28114796:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:40,0:40:0,119,255	0/1:20,10:32:132,0,255	0/0:49,0:49:0,146,255
+chr21	28120501	chr21:28120501:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:35:255,83,0	1/1:1,21:24:255,53,0	1/1:1,26:29:255,67,0
+chr21	28129676	chr21:28129676:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,23,13:37:255,225,139,255,0,255	1/1:1,31,0:32:255,76,0,255,94,255	1/2:1,19,21:42:255,255,255,255,0,241
+chr21	28132778	chr21:28132778:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:35:255,66,0	1/1:4,34:39:255,44,0	1/1:3,33:38:255,57,0
+chr21	28134457	chr21:28134457:M	GAATGAATGAATGAATGAATGAATGAATGAATGA	<7.5>,<10.5>	.	.	Motif=GAAT	GT:AD:DP:PL	0/2:21,0,17:38:255,255,255,0,255,255	0/1:13,16,0:29:208,0,153,255,236,255	0/2:15,0,9:24:190,236,255,0,255,255
+chr21	28136091	chr21:28136091:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,8,15:23:255,255,255,249,0,193	1/2:0,11,7:19:255,207,164,255,0,255	1/2:0,8,6:15:255,188,153,241,0,211
+chr21	28141738	chr21:28141738:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:4,8:12:184,0,74	0/0:25,0:25:0,75,255
+chr21	28142238	chr21:28142238:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:49:0,144,255	0/1:17,13:31:150,0,211	0/0:50,2:53:0,119,255
+chr21	28147674	chr21:28147674:M	ACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,5:17:92,0,223	0/0:10,0:10:0,30,255	0/1:3,4:8:97,0,56
+chr21	28149925	chr21:28149925:M	CGCGCGCGCGCGCG	<4>,<5>	.	.	Motif=CG	GT:AD:DP:PL	2/2:0,0,1:1:20,13,10,3,3,0	0/0:15,0,0:15:0,45,255,44,255,255	1/2:1,3,4:8:120,25,25,16,0,11
+chr21	28149938	chr21:28149938:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17.5>,<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,8,0:19:255,95,38,128,0,72,255,71,122,255	0/2:15,1,5,0:24:85,43,255,0,255,255,64,255,255,255	1/3:0,9,2,7:18:255,150,102,160,56,107,189,0,77,144
+chr21	28168360	chr21:28168360:M	TAAAATAAAAGGTATAATCAAATAAAAGAATAATAAAATAAAA	<8>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:13,8:21:146,0,255	0/0:27,0:27:0,81,255	0/1:20,18:38:255,0,255
+chr21	28168793	chr21:28168793:M	GTGTGTGTGTGGGTGTGTATGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,15:27:208,0,149	0/0:31,1:32:0,76,255	0/1:13,20:34:255,0,142
+chr21	28169645	chr21:28169645:M	AATTAATTAATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:13,16:29:223,0,166	0/0:30,0:30:0,88,255	0/1:17,16:33:203,0,223
+chr21	28173037	chr21:28173037:M	TATATATATATATATATATATATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	.	0/0:5,0:5:0,15,88	1/1:1,23:24:255,53,0
+chr21	28177833	chr21:28177833:M	AAAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:8,17:28:255,0,136	1/1:0,21:21:255,63,0
+chr21	28177937	chr21:28177937:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,37:43:255,91,0	0/1:12,8:22:80,0,124	0/1:21,25:47:255,0,209
+chr21	28179995	chr21:28179995:M	TATATATATACATATATAT	<11.5>,<12.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,20,13,0:33:255,140,43,201,0,112,255,141,209,255	0/2:19,0,16,0:35:255,153,255,0,255,255,255,255,255,255	1/3:0,8,0,3:12:195,66,43,142,64,127,147,0,86,194
+chr21	28180018	chr21:28180018:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<10>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:15,10:28:168,0,255	0/1:23,5:32:48,0,255	0/1:7,4:15:64,0,135
+chr21	28186676	chr21:28186676:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:89,9,0	0/0:8,0:9:0,14,234	0/1:2,1:5:16,0,70
+chr21	28188143	chr21:28188143:M	GAGAGAAAGACAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:17,24:41:255,0,187	0/1:25,19:44:226,0,255
+chr21	28194002	chr21:28194002:M	AAAAAAAAGAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,34:34:255,255,255,102,101,0	0/2:9,2,13:27:255,216,255,0,145,212	1/2:0,17,17:34:255,255,215,255,0,214
+chr21	28194845	chr21:28194845:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:80,9,0	.	1/1:0,1:1:26,3,0
+chr21	28205871	chr21:28205871:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:156,18,0	0/1:1,4:6:107,0,10	0/0:0,0:3:0,1,2
+chr21	28206704	chr21:28206704:M	TCTTTTGCTTTTTCTTTTCTTTTTTTTTTTTTTCTTTTTTTTT	<6.8>	.	.	Motif=TCTTTT	GT:AD:DP:PL	1/1:0,14:15:255,42,0	0/1:3,11:15:236,0,39	1/1:0,18:18:255,54,0
+chr21	28216326	chr21:28216326:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:24:0,42,255	0/0:27,1:30:0,70,255	0/1:11,15:27:189,0,126
+chr21	28225063	chr21:28225063:M	AAAGAAAAAGAAAGAAAGAGAAAAA	<2.5>	.	.	Motif=AAAGAA	GT:AD:DP:PL	0/1:32,14:46:131,0,255	0/1:40,9:49:26,0,255	0/1:17,8:37:96,0,255
+chr21	28234141	chr21:28234141:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,30,0:33:255,59,0,255,92,255	1/1:1,30,2:33:255,79,0,255,62,255	1/2:2,13,7:24:255,89,71,151,0,188
+chr21	28237991	chr21:28237991:M	CACACACACACACACACACACACACACACAC	<17.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,11:22:255,195,133,194,0,132	0/2:22,0,4:26:38,67,255,0,255,255	1/2:0,12,16:29:255,255,196,208,0,137
+chr21	28256095	chr21:28256095:M	ATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAA	<8.2>,<9.2>	.	.	Motif=ATATA	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,3,0:5:76,0,9,48,0,40	1/2:0,4,6:10:255,112,84,75,0,46
+chr21	28264840	chr21:28264840:M	AAAAAAAAAAAAGATAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0:28:0,83,255	0/0:29,0:32:0,92,255	0/1:22,9:32:146,0,255
+chr21	28264967	chr21:28264967:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/0:21,0:26:0,71,255	0/1:13,10:25:193,0,255
+chr21	28265082	chr21:28265082:M	AAAAACAAAAACAAAAAC	<5>	.	.	Motif=AAAAAC	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:22,0:22:0,66,255	0/1:13,10:23:195,0,255
+chr21	28266771	chr21:28266771:M	TTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTATTCTTTTTTTTTTTTTTTTT	<53>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:102,18,0	0/1:2,7:10:95,0,4	0/1:6,5:11:51,0,68
+chr21	28267754	chr21:28267754:M	TTTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,12:14:210,245,255,23,41,0	0/2:2,0,11:14:148,185,255,0,35,4	1/2:0,10,4:18:255,67,65,255,0,255
+chr21	28284744	chr21:28284744:M	ACACACACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,48:49:255,147,0	1/1:0,26:27:255,81,0
+chr21	28288702	chr21:28288702:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,2:8:12,0,73	0/1:3,3:7:40,0,30	0/0:10,0:10:0,29,172
+chr21	28292366	chr21:28292366:M	GAGAGAGAGAGAGAGAGAGAGA	<13>,<14>	.	.	Motif=GA	GT:AD:DP:PL	2/2:0,2,30:32:255,255,255,95,57,0	2/2:0,4,47:51:255,255,255,152,79,0	1/2:0,18,14:32:255,253,161,255,0,234
+chr21	28300160	chr21:28300160:M	ATTTATTTATTTATTTATTTATGTATTTATTTATTTATTTATTT	<10>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,12:12:220,35,0	0/1:12,16:28:220,0,144
+chr21	28309061	chr21:28309061:M	ATATATATGTGTATATATATATATATGCATATAAATATATATAT	<39>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:8:190,21,0	1/1:0,3:3:81,9,0	0/0:15,1:16:0,21,255
+chr21	28312992	chr21:28312992:M	AAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAA	<25>,<26>,<33>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,2,0:9:234,34,8,112,0,89,234,34,112,234	1/1:0,20,1,0:24:255,71,0,255,53,255,255,71,255,255	2/3:2,0,5,5:15:175,124,222,40,145,137,114,84,0,137
+chr21	28314045	chr21:28314045:M	AAAAGAAAAAAAAAAAACAAAAAAACAAAAAAAAA	<36>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28,1:30:255,70,0,255,70,255	1/2:0,12,4:16:255,68,22,173,0,161	1/1:0,21,0:21:255,62,0,255,62,255
+chr21	28314789	chr21:28314789:M	ATATATATATATATATATA	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:42,0:46:0,135,255	0/0:16,0:17:0,51,255	0/1:25,14:40:255,0,255
+chr21	28314875	chr21:28314875:M	TATATATAGATATATATATATATGTGTGTATATATATATATAT	<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,17:17:255,50,0	1/1:0,17:17:255,50,0
+chr21	28319699	chr21:28319699:M	ATAATATAATATATTATATATATATATATAAAATATAATATAAT	<9.6>,<10>	.	.	Motif=ATAAT	GT:AD:DP:PL	1/2:0,7,5:12:255,127,105,179,0,162	2/2:0,0,1:1:28,28,28,3,3,0	2/2:0,0,1:3:27,27,27,2,2,0
+chr21	28324507	chr21:28324507:M	CACACACACACACACACACACACACACACA	<18>,<19>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,11:18:255,196,145,124,0,73	1/2:0,15,9:25:255,153,81,255,0,195	0/2:17,2,10:31:224,138,255,0,255,255
+chr21	28330674	chr21:28330674:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16,0:19:255,38,0,255,53,255	1/1:2,15,0:19:237,22,0,255,50,255	1/2:1,6,5:13:146,68,100,95,0,146
+chr21	28334329	chr21:28334329:M	TATATAAATACATATACATATATATATGTACATTTATATATATATATATACACATTTTTATATATATACATATATATA	<40>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:10:189,30,0	.	0/0:2,0:2:0,6,37
+chr21	28336739	chr21:28336739:M	TATATATATATATATATATATATATATATAT	<21.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,3:7:197,47,26,63,0,42	.	2/2:0,0,2:4:63,37,31,6,6,0
+chr21	28341280	chr21:28341280:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:16:0,28,232	0/1:6,3:9:24,0,75	0/0:6,1:8:0,6,97
+chr21	28350605	chr21:28350605:M	GAGAGAGAGAGAGAGAGAGAGAG	<10.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,29:30:255,88,0	0/1:14,15:29:196,0,174
+chr21	28355701	chr21:28355701:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,19:40:240,0,250	0/1:22,18:41:193,0,255	0/1:26,20:47:232,0,255
+chr21	28356871	chr21:28356871:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,10:17:255,255,239,82,0,53	1/2:0,6,3:9:222,74,54,146,0,137	0/2:2,0,4:7:108,112,160,0,52,38
+chr21	28358629	chr21:28358629:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:30:148,0,202	0/1:16,24:42:255,0,152	0/1:20,21:43:246,0,247
+chr21	28364391	chr21:28364391:M	TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<9.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,13:14:255,34,0	1/1:0,8:9:214,24,0	1/1:0,18:18:255,54,0
+chr21	28370023	chr21:28370023:M	TTTTGTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:20,16:37:184,0,245	0/0:46,0:46:0,136,255
+chr21	28374560	chr21:28374560:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:49:0,145,255	0/1:24,14:38:138,0,255	0/0:55,0:57:0,167,255
+chr21	28383471	chr21:28383471:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,29,0:52:255,0,255,255,255,255	0/1:27,29,1:57:255,0,255,255,255,255	1/2:2,18,20:40:255,255,255,255,0,255
+chr21	28388007	chr21:28388007:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<18>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,14,0:27:255,0,255,255,223,255	0/1:11,15,0:30:255,0,249,255,197,255	1/2:0,14,6:23:255,105,102,255,0,255
+chr21	28406523	chr21:28406523:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:95,4,0	1/1:0,5:5:66,14,0	1/1:0,8:11:84,5,0
+chr21	28409173	chr21:28409173:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:96,12,0	1/1:0,4:4:120,12,0	1/1:0,4:4:124,12,0
+chr21	28413975	chr21:28413975:M	TTTTTCTTTTTTTTTTTTTTTTCTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,1:3:11,0,6	1/1:0,5:6:73,6,0	0/0:1,0:2:0,6,29
+chr21	28414160	chr21:28414160:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,41,0	1/1:3,28:31:255,39,0	1/1:2,21:24:255,35,0
+chr21	28416295	chr21:28416295:M	TTTTTTTTTGTTTTTTTTTTTTTT	<23>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,5:8:180,142,134,44,0,51	1/2:0,2,3:12:119,95,101,21,0,41	1/2:1,5,1:9:101,35,35,66,0,142
+chr21	28416535	chr21:28416535:M	GGTTTGGGTTTGGGTTT	<22.5>	.	.	Motif=GGTTTG	GT:AD:DP:PL	0/0:45,6:51:0,79,255	0/1:36,12:48:3,0,255	0/0:40,3:43:0,92,255
+chr21	28417429	chr21:28417429:M	GTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<24>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,1,7:13:201,78,64,176,53,173,123,0,98,103	2/3:0,3,2,13:22:238,169,167,143,70,126,99,33,0,70	1/2:0,6,5,4:17:255,126,125,138,0,129,230,98,104,235
+chr21	28438165	chr21:28438165:M	TCTCTCTCTCTCT	<10.5>,<11.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,1,51:53:255,255,255,158,124,0	2/2:0,2,27:29:255,255,255,87,55,0	1/2:0,10,13:24:255,169,99,142,0,72
+chr21	28446082	chr21:28446082:M	CTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTGTCTCTC	<23.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,18:18:255,54,0	0/1:7,9:16:196,0,141
+chr21	28454591	chr21:28454591:M	TGTGTGTGTTTGTGTGTGTGTGTGTGTGCATGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,15:16:255,28,0	1/1:0,18:19:255,42,0	0/1:10,12:22:162,0,121
+chr21	28463741	chr21:28463741:M	ACAAACAAACAAACAAACAAA	<5.5>	.	.	Motif=ACAA	GT:AD:DP:PL	1/1:1,17:20:108,25,0	1/1:0,28:31:193,52,0	1/1:0,26:30:185,49,0
+chr21	28471376	chr21:28471376:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,49:49:255,144,0	0/1:25,25:50:255,0,255
+chr21	28472428	chr21:28472428:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,0,13:15:195,201,248,9,43,0	1/2:0,10,17:27:255,237,207,166,0,90	0/2:8,2,12:24:162,130,255,0,102,82
+chr21	28480083	chr21:28480083:M	CTCTCTCTCTCTCTCT	<6>	.	.	Motif=CT	GT:AD:DP:PL	1/1:1,26:33:255,37,0	1/1:0,28:40:255,62,0	0/1:12,18:38:255,0,255
+chr21	28480098	chr21:28480098:M	TATATATATATATATATATAT	<7.5>,<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,23,13:41:255,188,80,255,0,255	1/1:0,42,0:46:255,137,0,255,130,255	0/2:12,2,19:37:255,245,255,0,255,208
+chr21	28482391	chr21:28482391:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:1,31:34:255,81,0	0/1:15,10:27:101,0,209
+chr21	28485051	chr21:28485051:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:43,8,0	1/1:0,7:7:108,20,0	0/1:1,4:5:49,0,1
+chr21	28486604	chr21:28486604:M	AAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,27:27:255,80,0	1/1:0,27:27:255,80,0
+chr21	28495194	chr21:28495194:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,39:41:255,83,0	1/1:0,30:32:255,93,0	1/1:1,43:45:255,114,0
+chr21	28499874	chr21:28499874:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,40,0	0/1:7,25:34:255,0,32	1/1:2,33:36:255,60,0
+chr21	28501934	chr21:28501934:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:69,12,0	1/1:0,2:4:53,11,0	0/1:3,3:7:41,0,31
+chr21	28506326	chr21:28506326:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:62,11,0	1/1:0,2:3:43,8,0	1/1:0,6:7:113,20,0
+chr21	28512558	chr21:28512558:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:64,12,0	0/1:1,3:5:35,0,14	0/1:1,2:3:25,0,8
+chr21	28516788	chr21:28516788:M	ATATATATATATATATATATA	<11.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,17,13:31:255,249,163,255,0,228	1/2:0,4,7:11:242,122,92,60,0,39	1/1:1,44,0:45:255,114,0,255,132,255
+chr21	28540406	chr21:28540406:M	ATATACTATATATATATATATATGTCATATATA	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,24:24:255,71,0	1/1:0,13:13:231,38,0	1/1:1,31:32:255,76,0
+chr21	28544464	chr21:28544464:M	TATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4:6:42,11,0	1/1:0,1:1:10,3,0	1/1:0,2:2:21,5,0
+chr21	28559670	chr21:28559670:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:13:195,20,0	0/1:1,6:11:91,0,8	1/1:0,8:10:121,9,0
+chr21	28561175	chr21:28561175:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:42:255,124,0	1/1:1,53:54:255,141,0	1/1:1,42:45:255,104,0
+chr21	28562301	chr21:28562301:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:19:72,0,155	0/1:11,10:23:107,0,145	0/0:29,3:34:0,43,255
+chr21	28562488	chr21:28562488:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:140,12,0	0/1:3,7:10:87,0,20	1/1:1,9:11:146,14,0
+chr21	28563171	chr21:28563171:M	CTCTCCCTCTCCCTCTCCCTCTCCC	<5.2>	.	.	Motif=CTCTCC	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,27:27:255,79,0	1/1:0,30:30:255,89,0
+chr21	28566812	chr21:28566812:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:168,17,0	0/1:2,4:8:55,0,14	1/1:2,11:13:155,4,0
+chr21	28569477	chr21:28569477:M	ACACACACACACACACACACACACACACACACACACACAC	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,15:15:255,45,0	1/1:0,9:9:234,27,0	1/1:0,15:19:255,38,0
+chr21	28569628	chr21:28569628:M	ACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,34:34:255,100,0	1/1:0,43:43:255,127,0
+chr21	28572830	chr21:28572830:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<24>,<25>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,5,0:19:255,135,90,255,0,255,255,86,255,255	2/3:0,0,5,9:14:255,255,255,149,149,109,84,83,0,42	1/2:0,4,7,0:12:255,184,165,116,0,93,237,118,116,218
+chr21	28580569	chr21:28580569:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:55,9,0	1/1:0,4:4:70,12,0	0/1:1,6:8:85,0,4
+chr21	28585330	chr21:28585330:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<10.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:8,3:11:22,0,113	1/1:0,25:25:255,74,0
+chr21	28587176	chr21:28587176:M	AAAAAAAAAAAAAA	<10>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,12:25:153,222,255,0,221,152	0/1:16,14,1:31:255,0,255,255,255,255	2/2:1,0,29:30:255,255,255,70,90,0
+chr21	28588983	chr21:28588983:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:12,5:19:34,0,166	0/0:17,2:24:0,29,255
+chr21	28595764	chr21:28595764:M	TTTATTTTACTTTATTTATTTATTTATTTATTTATTT	<10.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,9:22:109,0,186	0/1:6,15:21:210,0,47	1/1:0,25:25:255,74,0
+chr21	28601605	chr21:28601605:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<15.5>,<21.5>,<24.5>	.	.	Motif=TC	GT:AD:DP:PL	1/3:0,12,0,7:20:255,204,165,255,203,255,255,0,255,255	0/1:12,4,0,0:16:76,0,255,111,202,255,112,255,255,255	2/3:2,0,10,6:19:255,255,255,135,170,134,138,255,0,255
+chr21	28603550	chr21:28603550:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:11,0,2:18:46,83,255,0,255,255	1/2:0,6,6:14:255,163,142,179,0,161	0/0:22,0,0:23:0,69,255,69,255,255
+chr21	28608389	chr21:28608389:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:22:135,0,135	0/1:21,18:40:204,0,246	1/1:0,32:35:255,101,0
+chr21	28609568	chr21:28609568:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:18:159,0,57	1/1:0,14:19:255,52,0	0/0:15,0:18:0,50,255
+chr21	28611912	chr21:28611912:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,0:11:0,33,255,32,222,193	0/1:4,8,0:13:186,0,77,131,65,165	0/2:8,0,4:13:31,57,255,0,143,109
+chr21	28613075	chr21:28613075:M	GATAGATAGATAGATAGATAGAAAGATAGATAGATAGATAGATAGACAGATCTACAGATAGATAGATA	<16>	.	.	Motif=GATA	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:9,5:14:49,0,121	0/0:11,0:11:0,32,206
+chr21	28613620	chr21:28613620:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1,0:2:45,6,0,33,6,29	2/2:0,0,11:12:255,208,177,32,32,0	1/1:0,8,0:9:255,27,0,167,26,144
+chr21	28617791	chr21:28617791:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,8:24:255,127,82,255,0,196	1/2:0,15,13:29:255,192,144,255,0,191	1/1:0,36,0:37:255,111,0,255,109,255
+chr21	28631798	chr21:28631798:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,1:39:0,96,255	0/0:33,2:38:0,63,255	0/1:21,26:48:255,0,240
+chr21	28635102	chr21:28635102:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,3:33:0,41,255	0/0:21,3:25:0,11,255	0/1:13,6:20:58,0,176
+chr21	28647509	chr21:28647509:M	AAAAAAAAAAAAAAAAAGAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:6:52,0,17	1/1:1,7:8:100,7,0	1/1:0,6:8:122,23,0
+chr21	28649850	chr21:28649850:M	AATAATAAAATAATAA	<6.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/0:43,0:43:0,127,255	0/1:15,11:26:130,0,204
+chr21	28672960	chr21:28672960:M	AGAAAGAAAAAAAATAAAAAAAGAGAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGA	<16>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:5,6:11:74,0,55	0/1:4,0:8:1,0,50	0/1:3,1:5:6,0,40
+chr21	28700831	chr21:28700831:M	ACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/0:36,0:36:0,108,255	0/1:14,24:38:255,0,255
+chr21	28701547	chr21:28701547:M	CACACACACACATACACACACACACACACACACACACACACACACACACA	<15>,<24>	.	.	Motif=CA	GT:AD:DP:PL	0/2:8,0,13:21:169,228,255,0,142,81	0/2:7,0,11:19:142,194,255,0,118,63	0/1:4,15,1:20:255,0,68,255,52,255
+chr21	28702310	chr21:28702310:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:43:0,126,255	0/0:44,1:47:0,119,255	0/1:25,24:51:255,0,255
+chr21	28704558	chr21:28704558:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:23:0,67,255	0/1:9,4:15:23,0,124	0/1:10,23:35:255,0,77
+chr21	28705329	chr21:28705329:M	CTTTTCTTTTCTTT	<2>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/0:49,0:49:0,147,255	0/1:27,25:52:255,0,255
+chr21	28707257	chr21:28707257:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:20:0,57,255	0/0:18,0:21:0,62,255	0/1:16,11:30:221,0,255
+chr21	28708225	chr21:28708225:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/0:37,0:37:0,109,255	0/1:21,36:57:255,0,220
+chr21	28718618	chr21:28718618:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,2:45:0,95,255	0/0:45,0:45:0,132,255	0/1:30,33:63:255,0,255
+chr21	28724548	chr21:28724548:M	TTGTTTGTTTGTTTGTTTGTTT	<4.5>	.	.	Motif=TTGT	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/0:40,0:40:0,118,255	0/1:18,24:42:255,0,215
+chr21	28726870	chr21:28726870:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:17:0,50,255	0/0:18,0:22:0,64,255	0/1:9,6:20:118,0,217
+chr21	28730374	chr21:28730374:M	ACACACACAGACACACACACACACACACACACACACACACACACA	<21.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18,0:19:255,56,0,255,57,255	1/1:0,16,0:19:255,55,0,255,57,255	1/2:0,11,5:18:255,137,102,201,0,255
+chr21	28731760	chr21:28731760:M	AAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,96,255	0/0:34,0:39:0,113,255	0/1:12,28:41:255,0,209
+chr21	28746673	chr21:28746673:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:38:255,90,0	1/1:0,41:42:255,123,0	1/1:0,43:45:255,131,0
+chr21	28753357	chr21:28753357:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:15:0,39,255	0/0:8,0:9:0,27,221	0/1:15,16:35:255,0,255
+chr21	28761600	chr21:28761600:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:38:0,111,255	0/0:30,2:34:0,64,255	0/1:15,15:31:179,0,189
+chr21	28767425	chr21:28767425:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:35:0,103,255	0/0:46,0:47:0,138,255	0/1:14,20:34:255,0,157
+chr21	28771007	chr21:28771007:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/0:42,0:42:0,124,255	0/1:22,25:47:255,0,255
+chr21	28774589	chr21:28774589:M	AAAAAAAAAGAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:38:0,114,255	0/0:45,0:45:0,135,255	0/1:21,23:45:255,0,255
+chr21	28808412	chr21:28808412:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:24,1,12:38:114,201,255,0,255,255	1/2:3,16,15:35:255,207,255,232,0,255	0/2:19,2,9:30:70,121,255,0,242,255
+chr21	28811250	chr21:28811250:M	GAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAGAAAG	<33.8>	.	.	Motif=GAAA	GT:AD:DP:PL	0/0:22,0:24:0,66,255	0/0:12,0:14:0,36,255	0/1:12,7:19:17,0,250
+chr21	28819545	chr21:28819545:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:29:0,61,255	0/0:13,1:15:0,27,210	0/1:11,4:16:22,0,154
+chr21	28822573	chr21:28822573:M	ATATATATATATATATATACACATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/0:23,0:24:0,68,255	0/1:19,14:34:156,0,255
+chr21	28830878	chr21:28830878:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,3,13:18:214,147,185,19,2,0	2/2:1,0,14:15:206,209,233,28,43,0	1/2:1,6,6:13:201,64,70,79,0,60
+chr21	28856084	chr21:28856084:M	TTATTTTATTT	<1.2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:54,0:54:0,160,255	0/0:32,0:32:0,94,255	0/1:21,22:43:255,0,255
+chr21	28863411	chr21:28863411:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<12>	.	.	Motif=TA	GT:AD:DP:PL	0/0:0,0:4:0,0,0	1/1:0,5:5:155,15,0	.
+chr21	28864809	chr21:28864809:M	AGACAGACAGACAGA	<1.8>	.	.	Motif=AGAC	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,3:4:80,9,0	0/0:26,2:28:0,31,255
+chr21	28866176	chr21:28866176:M	ACACACACACACA	<7>,<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,9:19:234,166,129,56,0,153	1/2:0,3,11:14:255,211,183,17,0,19	0/0:25,3,2:30:0,31,114,36,162,255
+chr21	28877180	chr21:28877180:M	GAGGGAGGGAGGAAGGAAGGGAGGGAAGGGAG	<3.2>,<9>	.	.	Motif=GAGG	GT:AD:DP:PL	1/2:1,3,15:19:223,197,255,53,0,22	1/2:1,4,10:15:185,124,239,77,0,59	0/1:11,2,1:16:31,0,255,50,140,173
+chr21	28879081	chr21:28879081:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:174,18,0	1/1:0,1:1:29,3,0	1/1:0,2:3:67,9,0
+chr21	28880929	chr21:28880929:M	AAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,55,255	0/0:17,0:22:0,61,255	0/1:4,3:10:32,0,61
+chr21	28881626	chr21:28881626:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,6:8:200,104,82,35,0,12	1/2:0,3,4:8:188,67,44,60,0,39	0/2:2,0,1:4:19,20,76,0,54,48
+chr21	28886202	chr21:28886202:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:30:255,84,0	1/1:0,36:40:255,108,0	0/1:21,14:38:255,0,255
+chr21	28888334	chr21:28888334:M	TTTTTTTTTTTTCTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,51,0	1/1:1,18:19:255,30,0	0/1:17,8:28:149,0,255
+chr21	28889765	chr21:28889765:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,24:26:255,255,255,75,72,0	1/2:0,7,11:18:255,255,255,182,0,145	1/2:0,12,6:20:255,174,131,255,0,255
+chr21	28894577	chr21:28894577:M	AAAAAAAAAAAGAAGAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:32:255,75,0	1/1:0,32:33:255,96,0	0/1:13,18:32:231,0,151
+chr21	28901231	chr21:28901231:M	AAGAAAAAAAAGAAAAGAAAAGAAAA	<4.8>	.	.	Motif=AAGAA	GT:AD:DP:PL	1/1:1,38:39:255,94,0	1/1:0,27:27:255,81,0	0/1:16,13:29:211,0,255
+chr21	28901258	chr21:28901258:M	ATATATATATATATATGTATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,34:35:255,100,0	1/1:0,27:27:255,79,0	0/1:20,16:36:168,0,236
+chr21	28914934	chr21:28914934:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,17:18:255,52,0	1/1:0,26:27:255,79,0
+chr21	28926896	chr21:28926896:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:30,24:55:255,0,255	0/0:31,2:37:0,72,255	0/1:16,14:33:169,0,215
+chr21	28931067	chr21:28931067:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,22:32:255,0,179	0/0:32,0:37:0,96,255	1/1:0,40:41:255,120,0
+chr21	28933678	chr21:28933678:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,14:28:151,0,42	0/0:19,0:21:0,46,246	0/1:6,11:21:92,0,65
+chr21	28935840	chr21:28935840:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:23,0,23	0/0:12,1:14:0,24,192	0/1:7,4:12:34,0,94
+chr21	28947891	chr21:28947891:M	AAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,80,0	0/1:11,4:17:81,0,255	0/1:11,7:20:139,0,255
+chr21	28955923	chr21:28955923:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:83,9,0	0/0:4,0:6:0,15,123	0/1:3,6:9:138,0,58
+chr21	28960357	chr21:28960357:M	AAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAAAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:15:0,44,255	0/0:23,0:23:0,67,255	0/1:16,8:24:72,0,214
+chr21	28976119	chr21:28976119:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:32:165,0,230	0/1:17,25:42:255,0,174	0/0:32,0:33:0,87,255
+chr21	28977374	chr21:28977374:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:30,0,66	0/0:12,0:12:0,35,204	0/1:4,8:15:126,0,27
+chr21	28977928	chr21:28977928:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,4:23:9,0,255	0/1:23,8:31:49,0,255	0/0:35,0:35:0,103,255
+chr21	28980570	chr21:28980570:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,29:49:255,0,225	0/1:28,22:52:248,0,255	0/0:52,0:53:0,156,255
+chr21	28984653	chr21:28984653:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/0:46,1:48:0,121,255	0/1:16,16:33:195,0,205
+chr21	28988142	chr21:28988142:M	AAAAAAAAAAAAAAACAACAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,4:10:41,0,76	0/1:6,5:11:51,0,69	0/0:13,1:15:0,26,216
+chr21	28988467	chr21:28988467:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,3,4:20:15,16,232,0,146,212	0/0:23,1,1:25:0,56,255,56,255,255	1/2:1,19,12:35:255,200,244,255,0,255
+chr21	28991291	chr21:28991291:M	AAAAAAAAAAAAAAGAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:27:255,62,0	1/1:0,23:25:255,73,0	1/1:0,35:38:255,108,0
+chr21	28994777	chr21:28994777:M	ATATATATATATATATATTTATGCATATATATATAATATA	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,9:14:130,0,53	0/1:7,9:16:114,0,78	0/0:13,0:13:0,38,240
+chr21	28996019	chr21:28996019:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:27:0,76,255	0/1:11,8:21:79,0,130	0/1:16,7:25:50,0,203
+chr21	28996948	chr21:28996948:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:32:137,0,222	0/0:24,0:26:0,76,255	0/1:1,13:22:207,0,9
+chr21	29002115	chr21:29002115:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,18:20:255,22,0	0/0:11,1:13:0,21,184	0/1:14,17:33:219,0,164
+chr21	29003606	chr21:29003606:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:153,57,42,81,0,68	2/2:0,0,4:4:115,112,109,12,12,0	1/2:0,4,2:8:171,49,30,119,0,111
+chr21	29009393	chr21:29009393:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,13:19:196,0,17	0/1:7,10:18:129,0,68	0/0:9,1:10:0,12,142
+chr21	29010608	chr21:29010608:M	AAAAAATAAAAATAAAAAAAAAAAACCAAAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:19:63,0,144	0/0:7,1:8:0,6,103	0/1:3,2:5:21,0,38
+chr21	29012771	chr21:29012771:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,1:30:0,70,255	0/1:14,24:39:255,0,145	0/0:50,2:53:0,111,255
+chr21	29013689	chr21:29013689:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:13:0,35,207	0/0:16,0:17:0,49,255	0/1:2,3:5:36,0,19
+chr21	29016564	chr21:29016564:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,30:47:255,0,180	0/1:21,24:45:255,0,239	0/0:41,0:41:0,121,255
+chr21	29019351	chr21:29019351:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:29:255,86,0	1/1:0,37:38:255,114,0	1/1:0,27:28:255,81,0
+chr21	29019534	chr21:29019534:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,16,0:17:255,32,0,255,50,255	1/2:2,5,6:14:185,69,66,38,0,70	0/1:14,11,0:25:122,0,176,164,246,255
+chr21	29021802	chr21:29021802:M	AAAAAAAAGAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,13:24:179,0,115	0/1:13,16:31:190,0,155	0/1:12,15:30:187,0,151
+chr21	29026456	chr21:29026456:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:20,0,9	0/1:4,8:12:100,0,33	1/1:0,8:9:149,26,0
+chr21	29026538	chr21:29026538:M	TTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:4:0,12,96	0/0:0,0:1:0,3,12	1/1:0,6:7:175,17,0
+chr21	29028124	chr21:29028124:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,7:22:63,0,211	0/1:13,7:22:66,0,173	0/1:7,6:13:69,0,87
+chr21	29034298	chr21:29034298:M	TTTTCTTTTTTTTTTTTTTTTTATTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,9:18:117,0,91	0/1:11,8:19:81,0,132	0/1:6,5:13:60,0,77
+chr21	29037580	chr21:29037580:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,1:4:5,14,90,0,51,40	0/1:2,2,0:4:52,0,44,33,32,54	1/2:0,3,3:6:126,42,33,51,0,33
+chr21	29044448	chr21:29044448:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,2,6:15:67,73,225,0,72,105	1/2:3,13,3:19:178,7,36,179,0,255	0/0:15,0,1:16:0,47,255,29,254,251
+chr21	29047910	chr21:29047910:M	TGTGTGTGTGTGT	<4.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/0:33,0:33:0,99,255	0/1:26,26:53:255,0,255
+chr21	29048049	chr21:29048049:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,7:15:162,0,152	0/0:6,0:7:0,18,167	1/1:0,7:9:193,20,0
+chr21	29054601	chr21:29054601:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:5:17,4,0	1/1:0,4:8:155,18,0	1/1:0,0:2:28,6,0
+chr21	29057167	chr21:29057167:M	TTTTTTTTTTTTTTTCTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:25:99,0,200	0/1:10,11:21:130,0,112	0/0:27,0:28:0,82,255
+chr21	29058594	chr21:29058594:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:174,29,0	1/1:3,17:21:254,9,0	1/1:0,15:16:255,44,0
+chr21	29060086	chr21:29060086:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12:30:127,0,236	0/0:24,1:26:0,59,255	1/1:0,27:28:255,82,0
+chr21	29066082	chr21:29066082:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,13:14:255,39,0	1/1:0,12:12:255,36,0
+chr21	29083833	chr21:29083833:M	TGTGTGTGTGTGTGTATATATGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:27:0,78,255	0/0:14,0:14:0,41,251	0/1:13,7:20:71,0,182
+chr21	29087579	chr21:29087579:M	TTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,1:9:13,0,78	0/1:3,1:6:11,0,44	1/1:0,6:9:123,23,0
+chr21	29089169	chr21:29089169:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,3:3:89,89,89,9,9,0	2/2:0,0,2:4:86,86,86,12,12,0	1/1:0,11,0:13:255,39,0,255,39,255
+chr21	29095142	chr21:29095142:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	0/1:15,12:27:130,0,185	1/1:2,13:16:209,10,0
+chr21	29100084	chr21:29100084:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:12:97,0,27	0/1:5,2:8:19,0,60	0/0:1,0:1:0,3,17
+chr21	29102460	chr21:29102460:M	TCTCTCTCTCTCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:22,0:24:0,69,255	0/0:17,0:19:0,56,255	0/1:11,10:23:164,0,221
+chr21	29102478	chr21:29102478:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2,4:13:52,0,89,2,19,35	0/1:4,1,0:9:1,0,113,12,76,73	1/2:1,5,7:16:181,61,65,64,0,41
+chr21	29111265	chr21:29111265:M	AAAAACAAAACAACAACAACAACAACAACAAAAA	<5.2>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,31:31:255,93,0	0/1:18,19:37:255,0,255	1/1:0,30:30:255,90,0
+chr21	29119663	chr21:29119663:M	TTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,8,5:15:202,88,93,104,0,204	0/1:11,5,0:17:35,0,148,84,194,255	1/2:1,6,2:11:139,45,39,88,0,150
+chr21	29120180	chr21:29120180:M	TTTTCTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,23:47:255,0,255	0/0:32,0:32:0,94,255	0/1:16,18:34:231,0,192
+chr21	29120657	chr21:29120657:M	TTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTGTTTCTTTCTTTCCTTTCTCTCCTTCTCTCTTTCTTT	<17>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,9:9:146,26,0	0/1:3,3:6:30,0,30	1/1:0,7:7:112,20,0
+chr21	29121056	chr21:29121056:M	ATATATATATATAGTGTATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,3:3:35,8,0	0/0:22,0:22:0,66,255	.
+chr21	29123056	chr21:29123056:M	TTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:83,9,0	0/1:1,3:6:91,0,10	1/1:0,1:2:42,6,0
+chr21	29128306	chr21:29128306:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:33:190,0,209	0/0:21,0:24:0,69,255	0/1:18,11:29:114,0,242
+chr21	29131818	chr21:29131818:M	TATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,15:37:255,0,255	0/0:57,0:57:0,171,255	0/1:32,21:53:255,0,255
+chr21	29136508	chr21:29136508:M	TTTTTTTCTTTTCTTTTTTATTTTATTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:17,8:25:70,0,232	1/1:0,33:33:255,97,0
+chr21	29139896	chr21:29139896:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:51,9,0	0/0:1,0:1:0,3,16	.
+chr21	29141513	chr21:29141513:M	AAAAAGAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:17:149,0,43	0/1:13,15:31:184,0,142	0/1:10,7:17:72,0,124
+chr21	29150772	chr21:29150772:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:24:0,52,255	0/1:4,6:10:73,0,39	0/0:23,2:26:0,41,255
+chr21	29154392	chr21:29154392:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:28:255,82,0	0/1:13,14:29:171,0,154	1/1:0,32:33:255,97,0
+chr21	29158918	chr21:29158918:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:7:51,0,15	0/1:4,4:8:44,0,43	0/1:6,6:13:73,0,65
+chr21	29159826	chr21:29159826:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,1,36:38:255,255,255,93,93,0	1/2:1,24,16:41:255,224,177,255,0,255	2/2:0,0,45:45:255,255,255,133,133,0
+chr21	29162312	chr21:29162312:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:40:255,108,0	0/1:25,23:49:255,0,255	1/1:1,40:42:255,96,0
+chr21	29162684	chr21:29162684:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,16:21:232,0,30	0/1:17,11:30:116,0,211	0/1:18,16:34:187,0,223
+chr21	29163353	chr21:29163353:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,29:47:255,0,210	0/0:56,0:56:0,165,255	0/1:25,29:54:255,0,255
+chr21	29163694	chr21:29163694:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:19:37,0,171	0/1:10,3:15:16,0,133	0/1:7,9:17:111,0,70
+chr21	29167694	chr21:29167694:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,4:11:228,70,41,89,0,65	1/2:1,6,2:13:189,7,35,75,0,77	1/2:0,6,5:11:255,86,55,103,0,71
+chr21	29170622	chr21:29170622:M	TCTCTCTCTCTTTCTCT	<7>	.	.	Motif=TC	GT:AD:DP:PL	0/1:23,9:41:174,0,255	0/0:43,0:43:0,129,255	0/1:19,15:42:255,0,255
+chr21	29170638	chr21:29170638:M	TTTTTTTTTTCTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,20:39:242,0,224	0/0:37,0:37:0,108,255	0/1:13,18:31:222,0,136
+chr21	29170940	chr21:29170940:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:40:255,0,255	1/1:0,29:33:255,95,0	0/1:17,20:40:255,0,255
+chr21	29171807	chr21:29171807:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:8:116,0,33	1/1:0,4:6:128,17,0	0/1:3,5:11:112,0,68
+chr21	29172237	chr21:29172237:M	TTTTCTTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,4:12:184,72,92,144,0,222	1/1:0,41,0:43:255,126,0,255,129,255	1/2:0,19,2:23:255,35,3,255,0,255
+chr21	29176088	chr21:29176088:M	TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCT	<19>,<28>,<36>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	2/4:0,1,6,0,4:12:187,158,168,25,6,20,190,166,33,197,152,133,0,160,154	1/3:0,2,2,3,1:10:95,42,87,53,39,97,62,0,10,50,97,83,94,54,145	1/2:0,3,4,0,0:11:234,116,109,114,0,106,236,121,119,240,236,122,120,241,242
+chr21	29176172	chr21:29176172:M	TTTTTTTCTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:12:78,21,0	1/1:1,10:18:87,19,0	1/1:0,11:17:107,29,0
+chr21	29179544	chr21:29179544:M	CAAACAAACAAACAAACA	<5.5>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:12,15:27:193,0,139	1/1:0,34:34:255,100,0
+chr21	29180911	chr21:29180911:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>,<13.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:9,15,1:26:213,0,118,255,136,255	1/2:0,2,9:11:166,160,228,35,0,25	0/2:11,0,11:23:150,211,255,0,174,139
+chr21	29186228	chr21:29186228:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<12>,<13>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,1,28:29:255,255,255,84,67,0	1/2:1,11,14:26:255,232,177,150,0,134	2/2:0,0,32:32:255,255,255,96,94,0
+chr21	29186698	chr21:29186698:M	TGTGTGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,40:42:255,105,0	0/1:21,14:36:162,0,255	1/1:1,30:32:255,73,0
+chr21	29192034	chr21:29192034:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:127,15,0	.	1/1:0,1:1:28,3,0
+chr21	29193716	chr21:29193716:M	TTTGTTTTTTTGTTTGTTTGTTTTTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,23:23:255,68,0	1/1:0,28:28:255,83,0
+chr21	29202815	chr21:29202815:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:31:255,87,0	1/1:1,31:35:255,74,0	1/1:0,29:31:255,89,0
+chr21	29209502	chr21:29209502:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:15:34,0,123	0/1:14,5:20:27,0,175	0/1:10,4:18:28,0,140
+chr21	29217750	chr21:29217750:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:10:139,12,0	1/1:0,10:13:182,33,0	1/1:1,12:16:223,29,0
+chr21	29220759	chr21:29220759:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:32:237,0,163	1/1:0,38:40:255,114,0	0/1:13,15:29:193,0,149
+chr21	29231552	chr21:29231552:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,14:25:186,0,131	0/1:6,7:13:85,0,67	0/1:11,16:28:209,0,126
+chr21	29240964	chr21:29240964:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0,0:10:0,29,174,29,174,174	0/2:6,2,4:12:32,33,143,0,51,85	0/1:3,3,0:6:34,0,34,50,43,117
+chr21	29281612	chr21:29281612:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,16:27:216,0,123	0/1:10,11:22:139,0,110	0/0:24,1:25:0,55,255
+chr21	29296050	chr21:29296050:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,7:18:255,103,70,190,0,141	1/2:0,4,4:8:154,55,43,66,0,44	2/2:0,1,7:8:131,106,103,23,6,0
+chr21	29306170	chr21:29306170:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,16,8:24:255,255,255,122,144,74,255,255,0,218	1/3:0,12,3,9:26:255,181,237,255,102,255,255,0,255,255	0/2:10,0,10,1:21:240,255,255,0,255,235,159,255,158,255
+chr21	29309258	chr21:29309258:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,2:23:0,32,255	0/1:8,11:21:136,0,85	0/0:19,1:22:0,46,255
+chr21	29324557	chr21:29324557:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,24:25:255,75,0	1/1:0,35:35:255,105,0	1/1:0,29:32:255,93,0
+chr21	29339630	chr21:29339630:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:119,20,0	1/1:2,8:13:136,3,0	1/1:1,8:11:146,14,0
+chr21	29344635	chr21:29344635:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<17.5>,<18.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0,0:29:255,87,0,255,85,255,255,87,255,255	1/3:0,14,1,10:26:255,174,222,255,155,255,255,0,234,255	1/2:0,18,12,0:30:255,213,126,255,0,233,255,180,255,255
+chr21	29346278	chr21:29346278:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:44:255,129,0	1/1:1,37:39:255,97,0	1/1:1,62:63:255,167,0
+chr21	29358740	chr21:29358740:M	AGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAA	<20.2>	.	.	Motif=AGAA	GT:AD:DP:PL	.	1/1:0,6:6:160,18,0	.
+chr21	29360846	chr21:29360846:M	AAAAAAAAAAAAAAAACAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,54,255	0/1:6,7:14:141,0,118	0/0:11,0:13:0,33,255
+chr21	29377731	chr21:29377731:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:43,0:45:0,131,255	0/1:24,35:60:255,0,255
+chr21	29380744	chr21:29380744:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<8.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:11,15,0:26:255,0,251,255,211,255	0/0:8,0,0:8:0,24,239,24,168,146	1/2:0,9,10:19:255,187,255,255,0,236
+chr21	29381778	chr21:29381778:M	TGTGTGTGCCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:19,16:35:186,0,239	0/0:28,0:28:0,83,255
+chr21	29410941	chr21:29410941:M	TATATATATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,3:6:48,4,0	.	1/1:0,0:1:0,0,0
+chr21	29423027	chr21:29423027:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<13>	.	.	Motif=AG	GT:AD:DP:PL	0/0:26,0:28:0,78,255	0/1:16,10:28:192,0,255	0/0:42,1:44:0,102,255
+chr21	29431086	chr21:29431086:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,6,0:13:158,0,102,164,73,218	0/2:3,0,5:10:65,72,187,0,39,15	1/2:0,6,6:15:239,99,128,143,0,115
+chr21	29441829	chr21:29441829:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,46:47:255,120,0	0/1:23,23:47:255,0,255	0/1:25,25:51:255,0,255
+chr21	29443197	chr21:29443197:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,16:35:194,0,241	0/0:36,0:38:0,111,255	0/1:18,18:38:217,0,236
+chr21	29446397	chr21:29446397:M	AATTAATTAATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:12,20:32:255,0,138	0/0:26,0:26:0,77,255	0/1:15,13:28:162,0,200
+chr21	29450360	chr21:29450360:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:82,0,12	1/1:0,4:5:77,14,0	1/1:0,4:5:70,12,0
+chr21	29451825	chr21:29451825:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,18:33:255,0,219	0/0:21,0:24:0,63,255	0/1:12,19:33:255,0,240
+chr21	29454957	chr21:29454957:M	AAAAATAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,15:32:182,0,218	0/0:27,0:28:0,82,255	0/1:17,25:43:255,0,189
+chr21	29457518	chr21:29457518:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:4,0:6:0,13,123	0/0:0,0:4:0,6,30	1/1:1,12:15:255,11,0
+chr21	29461527	chr21:29461527:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,24:47:255,0,255	0/0:40,0:40:0,118,255	0/1:32,21:54:234,0,255
+chr21	29461666	chr21:29461666:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,3:4:36,0,4	0/1:2,0:3:3,0,24
+chr21	29461842	chr21:29461842:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10:20:129,0,109	0/0:29,1:31:0,73,255	0/1:14,11:27:131,0,185
+chr21	29465939	chr21:29465939:M	TTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,8,3:17:178,2,40,119,0,196	0/2:10,0,5:20:111,132,255,0,247,255	0/1:9,12,0:25:252,0,215,255,255,255
+chr21	29469147	chr21:29469147:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:11:42,0,87	0/1:15,5:20:28,0,200	0/0:17,0:19:0,53,255
+chr21	29469791	chr21:29469791:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:4:25,0,8	0/0:4,0:5:0,14,79	0/1:2,5:8:77,0,10
+chr21	29474442	chr21:29474442:M	CGCGCGCGCGCGC	<5.5>	.	.	Motif=CG	GT:AD:DP:PL	1/1:0,5:5:65,14,0	0/1:1,2:4:14,0,12	1/1:0,1:1:13,3,0
+chr21	29474454	chr21:29474454:M	CACACACACACACACACACACACACACACCACA	<21.5>,<22.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,22:30:255,255,201,93,0,4	2/2:0,3,19:23:255,251,184,68,16,0	1/2:0,9,16:25:255,201,128,116,0,42
+chr21	29476701	chr21:29476701:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,1:2:12,0,5	1/1:1,4:6:63,0,0	1/1:1,9:10:140,12,0
+chr21	29477669	chr21:29477669:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:21:255,44,0	1/1:0,29:29:255,84,0	1/1:1,21:22:255,47,0
+chr21	29480269	chr21:29480269:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,49:49:255,145,0	1/1:0,43:43:255,127,0	1/1:1,49:50:255,129,0
+chr21	29482380	chr21:29482380:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,4:10:255,73,44,110,0,82	1/2:0,5,4:13:255,76,42,113,0,85	1/2:0,9,3:13:255,54,19,161,0,127
+chr21	29485336	chr21:29485336:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:220,27,0	1/1:0,11:13:255,36,0	1/1:0,13:15:255,39,0
+chr21	29497688	chr21:29497688:M	TATATATATATATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,44:47:255,141,0	1/1:0,45:45:255,135,0	1/1:0,52:56:255,165,0
+chr21	29505365	chr21:29505365:M	AAAAAGAAAAAAAAGAAAACAAACAAAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,18:18:255,53,0	1/1:0,26:26:255,77,0
+chr21	29505561	chr21:29505561:M	AAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:5:145,18,3,71,0,57	1/2:0,1,3:6:129,63,49,18,0,4	1/2:0,0,2:3:66,35,26,11,0,4
+chr21	29519863	chr21:29519863:M	TATATATATATAAAATAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7:9:230,24,0	1/1:0,0:2:35,6,0	1/1:0,0:1:1,0,0
+chr21	29540971	chr21:29540971:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:15:255,42,0	1/1:0,23:26:255,75,0	1/1:0,20:24:255,71,0
+chr21	29541576	chr21:29541576:M	TTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:18:255,53,0	1/1:0,8:9:255,27,0	1/1:0,11:14:255,39,0
+chr21	29542033	chr21:29542033:M	GTGTGTGTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,43:47:255,137,0	1/1:0,41:42:255,126,0	1/1:0,36:36:255,108,0
+chr21	29558346	chr21:29558346:M	ATATATATATATATATTTCATATATATAT	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:21,14:35:60,0,136	0/1:8,21:29:149,0,9	0/1:20,19:39:103,0,113
+chr21	29558377	chr21:29558377:M	CACACACACACACACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,41:41:255,121,0	1/1:2,15:17:226,15,0	1/1:3,43:46:255,81,0
+chr21	29570844	chr21:29570844:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:27:255,32,0	1/1:1,22:28:255,50,0	1/1:5,30:35:255,12,0
+chr21	29574684	chr21:29574684:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:64,11,0	1/1:0,1:2:29,6,0	1/1:0,5:5:87,15,0
+chr21	29579956	chr21:29579956:M	TGTGTGTGTGT	<4.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,8:8:148,24,0	1/1:0,1:1:18,3,0	1/1:0,1:1:18,3,0
+chr21	29580488	chr21:29580488:M	TCTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,40:40:255,118,0	1/1:0,55:55:255,162,0
+chr21	29589425	chr21:29589425:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:9,20:29:255,0,72	0/0:15,2:18:0,16,249
+chr21	29591447	chr21:29591447:M	TCTTTTTCTTTTTC	<1.3>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:28,19:47:207,0,255	0/0:45,0:45:0,133,255
+chr21	29594180	chr21:29594180:M	TGTGTATGTGTGTGTGTGTGTGTGTGTATGTG	<14>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:33:0,90,255	0/1:12,16:32:255,0,238	0/0:27,0:28:0,81,255
+chr21	29595341	chr21:29595341:M	TTTTTTTTTTTTTTTTTCTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,4:16:25,0,170	0/1:13,4:17:19,0,173	0/0:18,1:21:0,43,255
+chr21	29606019	chr21:29606019:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:25:0,56,255	0/1:11,10:21:109,0,126	0/0:23,1:25:0,55,255
+chr21	29606665	chr21:29606665:M	AAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/1:8,17:26:255,0,142	0/0:21,0:22:0,66,255
+chr21	29606794	chr21:29606794:M	TCTTGTCTTGTCTTGTCTTGTCTTGT	<4.2>	.	.	Motif=TCTTG	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:17,12:29:133,0,224	0/0:37,0:37:0,109,255
+chr21	29619124	chr21:29619124:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,0,0:7:0,21,196,21,143,124	0/2:5,0,5:11:52,70,205,0,93,65	0/1:7,3,0:11:52,0,173,51,127,152
+chr21	29629195	chr21:29629195:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:28:0,80,255	0/1:7,7:16:71,0,91	0/1:8,17:27:213,0,79
+chr21	29632513	chr21:29632513:M	ACACACACACACACACACACACAC	<7>	.	.	Motif=AC	GT:AD:DP:PL	0/0:39,0:40:0,120,255	0/1:13,15:29:255,0,255	0/0:35,0:36:0,108,255
+chr21	29640162	chr21:29640162:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:18,20:39:250,0,205	0/0:40,0:41:0,120,255
+chr21	29654602	chr21:29654602:M	AAAGAAAGAAGGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAAAG	<13.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:10,9:19:96,0,112	0/0:23,0:24:0,70,255
+chr21	29695437	chr21:29695437:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<9.2>,<10.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,20,0:31:255,91,0,255,85,255	0/1:5,11,0:16:188,0,57,130,42,135	1/2:0,18,14:39:255,116,75,255,0,175
+chr21	29695477	chr21:29695477:M	TATATATATATAT	<4.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,16,15:32:255,255,255,255,0,255	1/2:0,8,7:18:255,177,219,174,0,255	1/2:7,8,23:39:255,255,255,23,0,255
+chr21	29707425	chr21:29707425:M	TCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC	<7.5>,<33.8>	.	.	Motif=TCCC	GT:AD:DP:PL	2/2:0,0,3:3:38,38,38,8,8,0	1/2:0,3,4:7:116,39,30,77,0,66	2/2:0,0,3:3:38,38,38,8,8,0
+chr21	29712084	chr21:29712084:M	ACACACACACACACACACACACACACACACACACACACACA	<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,10,9:21:255,169,145,188,0,162	1/1:0,17,1:22:255,59,0,255,33,255	2/2:0,1,12:18:255,255,255,44,10,0
+chr21	29719075	chr21:29719075:M	TATATACATATATATATATATATATAT	<11.5>,<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,12,15:27:255,255,255,255,0,255	1/1:0,8,0:8:189,24,0,203,24,226	2/2:0,0,25:27:255,255,255,80,81,0
+chr21	29725008	chr21:29725008:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,4:15:26,0,149	0/1:9,4:14:36,0,110	0/1:12,6:19:58,0,150
+chr21	29734346	chr21:29734346:M	CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<9>,<11>,<12>	.	.	Motif=CTTTT	GT:AD:DP:PL	1/2:0,11,11,0:22:255,255,255,255,0,255,255,208,255,255	1/3:0,13,0,7:20:255,187,148,255,125,255,255,0,255,255	2/3:0,0,11,6:17:255,255,255,112,112,63,204,204,0,156
+chr21	29735847	chr21:29735847:M	AAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6:11:227,106,96,48,0,22	2/2:0,2,11:14:255,188,152,39,3,0	1/2:0,3,13:19:255,225,196,56,0,8
+chr21	29736205	chr21:29736205:M	ATTATGATTATGATTATGATTATGATTAT	<3.8>	.	.	Motif=ATTATG	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,40:41:255,120,0	1/1:0,38:38:255,112,0
+chr21	29750217	chr21:29750217:M	CTCCCTCCCTTCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTC	<13>,<16.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:0,3,7:14:202,171,164,39,0,61	1/2:0,2,3:6:92,72,68,25,0,46	1/2:0,6,10:20:255,246,230,78,0,130
+chr21	29765858	chr21:29765858:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:34:0,102,255	0/1:13,12:26:255,0,255	0/0:40,0:40:0,120,255
+chr21	29767865	chr21:29767865:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19,1:20:255,60,0,255,40,255	1/2:0,19,13:33:255,247,149,255,0,237	1/1:0,23,0:23:255,69,0,255,68,255
+chr21	29774447	chr21:29774447:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,5:9:133,58,79,35,0,28	1/2:1,4,3:8:131,26,39,51,0,46	0/2:2,0,6:10:81,80,144,0,38,22
+chr21	29775276	chr21:29775276:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:7:0,3,81	0/1:2,3:5:35,0,18	0/0:4,0:6:0,11,68
+chr21	29779336	chr21:29779336:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGCACGTGTGTGTGTG	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,24:27:255,71,0	1/1:0,17:25:255,59,0	1/1:0,25:29:255,75,0
+chr21	29779495	chr21:29779495:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,38:39:255,115,0	0/1:12,17:33:248,0,119	1/1:1,41:43:255,108,0
+chr21	29782087	chr21:29782087:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,0:18:0,52,255	0/0:12,1:13:0,21,189	0/1:11,4:16:33,0,149
+chr21	29785562	chr21:29785562:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:6:0,1,68	1/1:0,5:6:92,17,0	0/0:4,0:5:0,14,76
+chr21	29796976	chr21:29796976:M	AAAAAAAAAAAAGAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,38:39:255,96,0	1/1:1,32:33:255,79,0	1/1:1,37:39:255,96,0
+chr21	29799497	chr21:29799497:M	TTTGTTTGTTTGTTTGTTTTCATTTGTTTTTTGTTTGTTTGTTTGTTTTTTG	<12>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,19:20:255,59,0	0/1:14,12:26:140,0,177	1/1:0,21:21:255,62,0
+chr21	29810297	chr21:29810297:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28,1:29:255,84,0,255,67,255	1/2:0,20,15:36:255,223,160,255,0,255	1/1:0,39,0:39:255,117,0,255,115,255
+chr21	29813914	chr21:29813914:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,89	0/1:9,8:18:93,0,101	0/0:12,0:12:0,35,210
+chr21	29814091	chr21:29814091:M	ATAAAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/0:19,1:21:0,37,226	0/1:11,5:17:25,0,96	0/1:12,4:18:18,0,106
+chr21	29821058	chr21:29821058:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11:24:132,0,169	0/1:20,11:34:105,0,255	1/1:1,22:26:255,47,0
+chr21	29827976	chr21:29827976:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,11:23:202,0,167	0/1:13,11:25:183,0,224	0/0:21,0:25:0,74,255
+chr21	29828012	chr21:29828012:M	TGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,9:27:51,0,141	0/1:15,9:25:54,0,120	0/0:31,0:32:0,89,255
+chr21	29830308	chr21:29830308:M	CACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACA	<28>,<30>,<31>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,9,1,6:17:255,116,162,255,89,255,255,0,255,255	1/3:0,2,0,5:7:139,85,144,133,85,130,68,0,62,53	2/3:0,0,6,4:10:229,241,255,59,71,41,105,105,0,76
+chr21	29839041	chr21:29839041:M	TTTCTTTTCTTTTCTTTTCTTTTTTTT	<6.4>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:16,25:41:255,0,187	0/1:18,7:25:53,0,252	0/0:32,0:32:0,94,255
+chr21	29847930	chr21:29847930:M	CACACACACACA	<8>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,17:41:255,0,255	0/0:23,1:24:0,48,255	0/1:22,14:38:250,0,255
+chr21	29848049	chr21:29848049:M	TTATTATTATTATTATTATTA	<8>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:16,13:29:166,0,224	0/0:30,0:30:0,88,255	0/1:17,10:27:109,0,241
+chr21	29848756	chr21:29848756:M	TATATATATATATATATATATATAT	<15.5>,<16.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,1,5:14:101,37,164,0,130,133	1/1:0,1,0:1:26,3,0,13,3,11	0/1:7,4,0:11:67,0,154,42,168,202
+chr21	29848780	chr21:29848780:M	TTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,5:14:255,154,132,140,0,115	1/2:0,3,0:6:103,18,6,79,0,76	1/2:0,1,3:7:146,99,89,40,0,26
+chr21	29851057	chr21:29851057:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:37:166,0,255	0/0:22,3:28:0,17,255	0/1:17,17:36:228,0,206
+chr21	29859378	chr21:29859378:M	ATAAAATAAAATGAAATAAAAAAACAAAAAAAAATAAA	<7.8>	.	.	Motif=ATAAA	GT:AD:DP:PL	0/1:11,15:26:82,0,42	0/0:12,0:14:0,35,129	0/1:16,13:30:52,0,90
+chr21	29861308	chr21:29861308:M	TCTTTTTTTTTCTTTT	<3.4>	.	.	Motif=TCTTT	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,30:30:255,90,0	1/1:0,34:34:255,102,0
+chr21	29868026	chr21:29868026:M	AAGGAAGGAAGGAAGGAAGGAAGGGAAGGA	<5.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/0:40,0:40:0,120,255	0/1:22,21:43:255,0,255
+chr21	29871761	chr21:29871761:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3,0:10:153,41,25,77,0,79,145,44,104,199	2/3:0,0,4,4:8:210,169,156,66,66,43,66,55,0,43	0/1:3,5,1,0:9:70,0,25,54,34,129,84,49,147,204
+chr21	29872193	chr21:29872193:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:9:64,0,46	1/1:2,8:12:122,0,0	0/0:6,0:6:0,18,106
+chr21	29875002	chr21:29875002:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,30:34:255,45,0	1/1:0,30:33:255,96,0	1/1:1,34:38:255,71,0
+chr21	29876113	chr21:29876113:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,19,11:31:255,193,106,255,0,255	2/2:0,2,25:27:255,255,255,80,45,0	1/2:0,9,8:17:255,139,90,157,0,109
+chr21	29888133	chr21:29888133:M	CCCTCCCTCCCTCCCTCCCTCC	<33.8>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:11,4:15:5,0,255	0/1:11,4:15:4,0,253	0/0:14,4:18:0,5,255
+chr21	29900084	chr21:29900084:M	AAAAAAAAAAAAAAAAGAAAATAAAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,16:20:255,22,0	1/1:0,21:24:255,69,0	1/1:1,17:22:255,43,0
+chr21	29926106	chr21:29926106:M	AAAAAAAAAAAAAAAA	<13>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,16,10:27:255,162,219,255,0,255	1/2:2,25,12:40:255,172,255,255,0,255	1/1:0,42,0:46:255,135,0,255,135,255
+chr21	29937798	chr21:29937798:M	TTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,15:35:255,255,255,255,0,255	1/2:0,18,26:48:255,255,255,255,0,255	2/2:0,0,23:25:255,255,255,75,75,0
+chr21	29944864	chr21:29944864:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,12:15:183,9,0	1/1:1,20:21:255,45,0	1/1:4,19:25:255,5,0
+chr21	29948120	chr21:29948120:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:42:255,123,0	1/1:1,28:29:255,68,0	1/1:1,35:36:255,88,0
+chr21	29953362	chr21:29953362:M	AAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:114,20,0	0/1:3,4:7:45,0,29	1/1:0,5:7:86,11,0
+chr21	29954739	chr21:29954739:M	TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:1,0,21:22:255,255,255,46,63,0	2/2:2,0,30:32:255,255,255,59,90,0	1/2:0,15,10:25:255,178,210,255,0,255
+chr21	29962870	chr21:29962870:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:10:39,0,61	0/1:2,3:6:34,0,18	0/1:3,5:13:60,0,47
+chr21	29969361	chr21:29969361:M	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<9.5>	.	.	Motif=ATAA	GT:AD:DP:PL	0/1:13,12:25:158,0,177	0/1:6,11:17:149,0,59	0/1:8,12:21:173,0,89
+chr21	29971487	chr21:29971487:M	ATCATCATCAT	<2.7>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,47:47:255,139,0	1/1:0,55:55:255,162,0	1/1:0,46:46:255,136,0
+chr21	29978464	chr21:29978464:M	ATATATATATATATATATA	<12.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,14,0:18:255,36,0,255,53,255	1/1:0,6,0:8:229,24,0,225,24,223	1/2:0,8,3:12:255,104,77,255,0,255
+chr21	29990798	chr21:29990798:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,56:56:255,166,0	1/1:1,42:43:255,109,0	1/1:1,39:40:255,99,0
+chr21	30000683	chr21:30000683:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,89,0	1/1:1,35:37:255,91,0	1/1:2,29:31:255,55,0
+chr21	30006879	chr21:30006879:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:49,1:53:0,137,255	0/0:39,0:40:0,117,255	0/1:10,19:31:255,0,103
+chr21	30008818	chr21:30008818:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:88,15,0	1/1:0,4:5:56,3,0	1/1:1,5:6:69,0,0
+chr21	30009965	chr21:30009965:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,3:38:0,47,255	0/0:31,1:33:0,79,255	0/1:13,14:28:178,0,150
+chr21	30010152	chr21:30010152:M	AAAAAAAAAAAAAAAAAGAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:24:255,71,0	1/1:0,29:34:255,95,0	1/1:0,16:17:255,48,0
+chr21	30017215	chr21:30017215:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:45,0,18	0/1:1,1:3:8,0,20	0/1:2,8:10:108,0,5
+chr21	30020817	chr21:30020817:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:36:255,103,0	1/1:0,21:22:255,64,0	1/1:0,44:45:255,132,0
+chr21	30032208	chr21:30032208:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:1,22:24:255,43,0	1/1:3,29:32:255,40,0
+chr21	30037106	chr21:30037106:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:34:255,96,0	1/1:0,26:29:255,83,0	1/1:0,41:45:255,128,0
+chr21	30038266	chr21:30038266:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,1,2:4:65,16,34,0,10,18	1/2:0,3,1:5:120,16,1,57,0,44	0/2:1,1,4:7:124,57,67,0,9,8
+chr21	30045691	chr21:30045691:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:0,40:41:255,120,0	1/1:0,42:44:255,129,0
+chr21	30046812	chr21:30046812:M	TGTGTATGGGTATGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGT	<9.5>,<10.5>	.	.	Motif=TGTGTA	GT:AD:DP:PL	1/1:0,20,0:20:255,59,0,255,59,255	1/2:0,7,7:14:255,126,86,107,0,86	1/1:0,23,1:24:255,71,0,255,52,255
+chr21	30058533	chr21:30058533:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:16:0,46,255	0/0:19,3:27:0,6,255	0/1:13,7:23:56,0,187
+chr21	30062279	chr21:30062279:M	AAAAATAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAA	<62>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:15:159,0,188	0/1:5,3:8:64,0,122	0/0:7,0:8:0,21,204
+chr21	30088691	chr21:30088691:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:30:0,87,255	0/0:31,0:34:0,96,255	0/1:13,10:25:105,0,179
+chr21	30103334	chr21:30103334:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,3:30:0,26,255	0/1:21,10:33:88,0,255	0/0:40,1:43:0,108,255
+chr21	30106442	chr21:30106442:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:86,19,0	1/1:0,3:3:38,8,0	0/1:1,1:4:23,0,2
+chr21	30128143	chr21:30128143:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,1:14:0,2,156	0/1:5,3:10:42,0,56	0/0:6,1:8:0,6,97
+chr21	30174970	chr21:30174970:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:28:255,27,0	1/1:5,28:36:255,20,0	1/1:3,27:31:255,38,0
+chr21	30191980	chr21:30191980:M	TCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTTGCTCTCTCTCTTTCTCCTCTC	<32>	.	.	Motif=TC	GT:AD:DP:PL	0/1:10,8:20:172,0,215	0/1:10,5:15:91,0,227	0/1:8,7:16:149,0,175
+chr21	30205795	chr21:30205795:M	TTTTTCTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,10:21:128,0,119	0/1:10,12:23:148,0,103	0/1:10,12:25:157,0,114
+chr21	30217900	chr21:30217900:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<29>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7,0:8:106,6,0,128,24,219	1/2:0,3,3:8:139,90,78,58,0,75	1/1:0,4,0:6:93,17,0,104,17,138
+chr21	30219685	chr21:30219685:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,32,186	0/1:5,9:14:112,0,44	0/0:17,0:19:0,53,255
+chr21	30226492	chr21:30226492:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:3:81,9,0	.
+chr21	30231682	chr21:30231682:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,2:43:0,89,255	0/1:15,18:33:224,0,171	0/0:25,1:26:0,58,255
+chr21	30235160	chr21:30235160:M	TTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:41:0,121,255	0/0:30,0:37:0,108,255	0/1:10,13:26:255,0,218
+chr21	30237551	chr21:30237551:M	TTTCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTCT	<12>,<12.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/0:13,0,0:13:0,39,255,39,255,254	0/1:6,5,0:11:113,0,144,131,108,223	0/2:3,0,9:13:132,168,255,0,66,31
+chr21	30241248	chr21:30241248:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:21,17:38:255,0,255	0/0:35,0:35:0,105,255
+chr21	30254274	chr21:30254274:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:20:0,57,255	0/1:14,15:33:255,0,255	0/0:17,0:21:0,53,255
+chr21	30268072	chr21:30268072:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:6:71,0,0	0/1:2,6:9:77,0,10	1/1:0,2:2:34,6,0
+chr21	30271040	chr21:30271040:M	AAACAAAACAAAAACAACAACAACAACAAAAAAAAA	<5.8>	.	.	Motif=AAACAA	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:13,20:33:255,0,180	0/0:32,0:32:0,95,255
+chr21	30279336	chr21:30279336:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,54:54:255,255,255,160,160,0	1/2:0,28,33:61:255,255,255,255,0,255	2/2:0,1,52:53:255,255,255,156,138,0
+chr21	30279861	chr21:30279861:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,4:16:18,0,148	0/1:9,2:13:8,0,106	0/0:15,2:17:0,17,208
+chr21	30280874	chr21:30280874:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:19:0,19,253	0/1:15,8:25:85,0,184	0/0:21,0:25:0,69,255
+chr21	30292509	chr21:30292509:M	AAAAAAATAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/1:14,19:33:240,0,152	0/0:36,1:37:0,91,255
+chr21	30297067	chr21:30297067:M	TGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGCGTGTGTGTGTGT	<31.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:3,6:9:78,0,26	0/0:14,0:14:0,41,252
+chr21	30304472	chr21:30304472:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:15:0,44,254	0/1:11,9:22:89,0,133	0/0:11,0:13:0,35,199
+chr21	30313592	chr21:30313592:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:157,15,0	0/1:11,8:20:75,0,135	1/1:0,15:15:255,44,0
+chr21	30322393	chr21:30322393:M	GTGTGTGTGTG	<7.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:15,0:17:0,51,255	0/1:4,8:13:146,0,66	0/0:13,0:13:0,39,255
+chr21	30322403	chr21:30322403:M	GGGGGGGGGGGGGCGGTGGGGGGG	<23>,<25>	.	.	Motif=G	GT:AD:DP:PL	0/2:4,0,5:9:44,69,152,0,45,30	1/2:0,7,3:11:105,38,41,92,0,140	1/2:0,1,3:5:43,40,62,13,0,12
+chr21	30333520	chr21:30333520:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,20,197	1/1:0,6:7:103,18,0	0/0:8,0:10:0,26,149
+chr21	30334488	chr21:30334488:M	ATAGATAGATAGATGATAGATGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<15.5>,<15.8>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:5,14,0:19:255,0,87,190,127,255	1/2:0,11,7:18:255,98,45,152,0,100	0/1:8,10,0:18:230,0,174,135,205,255
+chr21	30334616	chr21:30334616:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/1:10,6:17:131,0,249	0/0:25,0:27:0,81,255
+chr21	30337984	chr21:30337984:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:35:0,79,255	0/1:14,7:22:58,0,178	0/0:36,0:39:0,113,255
+chr21	30341737	chr21:30341737:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:35:122,0,255	1/1:4,21:26:255,7,0	0/1:23,7:31:33,0,255
+chr21	30346402	chr21:30346402:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/1:13,12:25:140,0,157	0/0:23,0:23:0,68,255
+chr21	30347297	chr21:30347297:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:39:0,77,255	0/1:22,16:42:179,0,255	0/0:40,0:44:0,128,255
+chr21	30351716	chr21:30351716:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTA	<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:17,0:18:0,50,255	0/1:8,9:17:114,0,95	0/0:22,0:22:0,65,255
+chr21	30356359	chr21:30356359:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:33:0,96,255	0/1:23,15:38:147,0,255	0/0:34,0:34:0,100,255
+chr21	30362723	chr21:30362723:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:27:209,0,125	1/1:1,29:32:255,76,0	0/1:14,19:34:246,0,163
+chr21	30367276	chr21:30367276:M	TTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:31:0,92,255	0/1:8,12:22:255,0,166	0/0:22,0:24:0,71,255
+chr21	30367585	chr21:30367585:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,41:41:255,121,0	1/1:0,26:26:255,77,0
+chr21	30388523	chr21:30388523:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,30:31:255,73,0	1/1:1,40:41:255,102,0
+chr21	30388644	chr21:30388644:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,12:15:255,42,0	1/1:0,15:16:255,48,0
+chr21	30390184	chr21:30390184:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:95,6,0	1/1:0,2:2:33,6,0	0/1:0,1:3:19,0,3
+chr21	30393447	chr21:30393447:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,66,0	1/1:1,30:39:255,74,0	1/1:0,34:38:255,102,0
+chr21	30394202	chr21:30394202:M	TTTTTTTTTTTTTTTTTTTTTTTT	<18>,<25>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:32,38,59,6,6,0	0/2:3,0,3:6:29,46,153,0,47,29	1/2:0,5,2:9:181,31,31,155,0,149
+chr21	30394756	chr21:30394756:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,43:44:255,129,0	1/1:1,41:43:255,108,0
+chr21	30403976	chr21:30403976:M	TTTTTCGTTTTCTTTTTCTTTTTTTTT	<4.7>	.	.	Motif=TTTTTC	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,30:30:255,90,0	1/1:0,20:20:255,60,0
+chr21	30404948	chr21:30404948:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:8:95,5,0	1/1:0,6:6:102,18,0	1/1:0,8:8:140,23,0
+chr21	30405493	chr21:30405493:M	TTTATTTTTATTATTTATTTTTATTTTTTATTTTTATTTTT	<4.7>	.	.	Motif=TTTATT	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,27:27:255,81,0	1/1:0,36:36:255,108,0
+chr21	30410757	chr21:30410757:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,11:13:191,20,0	1/1:0,5:7:108,20,0	1/1:1,19:22:255,44,0
+chr21	30411772	chr21:30411772:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:25:148,0,139	0/0:28,2:32:0,54,255	0/1:14,14:29:157,0,172
+chr21	30420803	chr21:30420803:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:4,0,107	0/1:3,3:6:31,0,32	0/1:5,7:13:79,0,55
+chr21	30449424	chr21:30449424:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<25>	.	.	Motif=CT	GT:AD:DP:PL	0/0:5,0:8:0,20,109	0/0:1,0:1:0,3,17	0/1:1,5:8:64,0,7
+chr21	30452826	chr21:30452826:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:32:255,56,0	0/1:15,20:39:152,0,88	1/1:1,42:51:255,51,0
+chr21	30461491	chr21:30461491:M	AAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,11:14:255,255,255,41,41,0	1/2:1,11,5:17:255,109,91,168,0,255	2/2:0,0,12:13:255,255,255,39,39,0
+chr21	30466481	chr21:30466481:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<20.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:2,0,9,11:22:255,255,255,255,255,255,122,255,0,246	1/3:0,16,0,7:24:255,195,144,255,195,255,255,0,255,255	2/3:2,0,5,7:14:224,244,255,158,193,172,51,159,0,138
+chr21	30482218	chr21:30482218:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,17,19:38:255,255,255,252,0,218	0/2:22,1,11:36:224,182,255,0,255,255	0/1:9,36,0:46:255,0,40,255,170,255
+chr21	30483959	chr21:30483959:M	TATATATATATATATGTATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	0/0:16,0:16:0,46,255	0/1:5,12:17:138,0,29	0/0:28,0:28:0,81,255
+chr21	30483978	chr21:30483978:M	AGAGAGAGAGAGAGAGAGA	<12.5>,<14.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,15,13:30:255,255,255,255,0,255	0/2:13,1,9:24:195,201,255,0,255,255	1/2:0,13,9:23:255,242,195,255,0,255
+chr21	30489116	chr21:30489116:M	ACACATACACACACACACACACACACACACAC	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:13,12:26:139,0,156	1/1:0,25:25:255,74,0
+chr21	30492859	chr21:30492859:M	TTTTCTTTTCTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25,0:25:255,75,0,255,74,255	1/2:0,13,14:28:255,208,167,238,0,161	1/1:0,26,2:28:255,78,0,255,46,255
+chr21	30494709	chr21:30494709:M	AAAAAAAAAAAAAAGAAAAAAAAAAGAAAAGAAAAGAAAA	<35>,<39>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6,0:6:172,18,0,172,18,172	1/2:2,9,6:17:255,67,140,194,0,204	1/1:0,9,0:10:255,30,0,255,30,255
+chr21	30498212	chr21:30498212:M	GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,16,0:18:255,51,0,255,51,255	1/2:0,8,9:19:255,232,198,219,0,184	1/1:0,23,0:23:255,69,0,255,69,255
+chr21	30507160	chr21:30507160:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,49:50:255,129,0	0/1:23,27:52:255,0,255	1/1:0,42:42:255,124,0
+chr21	30522235	chr21:30522235:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:12,1:13:0,23,140	0/0:8,1:9:0,12,87	0/1:7,6:13:40,0,52
+chr21	30522251	chr21:30522251:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:104,12,0	0/1:4,2:6:33,0,85	0/1:1,7:8:154,0,2
+chr21	30522265	chr21:30522265:M	ATATATATATATATACATATATATATATA	<17.5>,<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,12:23:255,166,98,111,0,42	1/2:0,1,2:3:105,24,15,12,0,3	1/2:0,8,6:18:255,113,63,97,0,44
+chr21	30524108	chr21:30524108:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,97,0	0/1:19,23:42:255,0,214	1/1:1,43:44:255,111,0
+chr21	30524233	chr21:30524233:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:4,22:27:255,9,0	1/1:3,33:38:255,47,0
+chr21	30533037	chr21:30533037:M	GTTTTGTTTTTGTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<12.2>,<13.2>	.	.	Motif=GTTTT	GT:AD:DP:PL	1/2:0,5,6:11:238,114,84,83,0,65	0/2:9,0,6:16:128,107,230,0,162,215	1/1:0,9,0:9:171,27,0,171,27,171
+chr21	30552729	chr21:30552729:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<29.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:7:32,0,49	0/1:6,3:10:21,0,81	0/1:3,5:9:60,0,35
+chr21	30558067	chr21:30558067:M	TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:70,12,0	0/1:2,7:10:91,0,7	1/1:0,6:6:102,18,0
+chr21	30562374	chr21:30562374:M	TATATATATATATATATGTATATATATATATATACATGTATGTATGTATATATA	<33.8>	.	.	Motif=TATA	GT:AD:DP:PL	1/1:0,3:7:44,9,0	.	0/0:0,0:2:0,0,0
+chr21	30576984	chr21:30576984:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,40:40:255,118,0	1/1:0,40:40:255,118,0
+chr21	30621612	chr21:30621612:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:30:255,60,0	1/1:3,23:28:255,30,0	0/1:8,26:35:255,0,40
+chr21	30623886	chr21:30623886:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:213,24,0	1/1:0,7:9:220,27,0	1/1:0,2:3:67,9,0
+chr21	30626625	chr21:30626625:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:31:255,54,0	1/1:2,26:29:255,50,0	1/1:0,22:23:255,67,0
+chr21	30632675	chr21:30632675:M	AAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:69,9,0	1/1:0,5:6:157,18,0	1/1:0,1:1:29,3,0
+chr21	30650305	chr21:30650305:M	TTTTTTTTTCTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:242,27,0	1/1:0,12:12:255,36,0	1/1:0,13:14:255,39,0
+chr21	30656424	chr21:30656424:M	AAAAAAAAAAAAAAAAAGAAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:17:255,49,0	1/1:1,14:16:221,27,0	1/1:0,20:20:255,59,0
+chr21	30683970	chr21:30683970:M	AAAAAAAAAAGAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,2:23:0,3,255	1/1:0,6:7:158,18,0	0/1:13,4:17:57,0,255
+chr21	30690894	chr21:30690894:M	AAAAAAAAATGAAAAGAAAAGAAAA	<4.8>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:20,19:39:255,0,255	1/1:0,36:36:255,108,0	0/1:18,20:38:255,0,255
+chr21	30695589	chr21:30695589:M	CAAACAAACAAACAAACAAAC	<6.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:20,23:43:255,0,255	1/1:1,32:33:255,79,0	0/1:14,15:29:197,0,178
+chr21	30701769	chr21:30701769:M	TGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGT	<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,9,0:19:200,0,227,163,255,255	1/2:0,9,6:15:255,104,61,156,0,114	0/1:20,7,0:30:116,0,255,130,255,255
+chr21	30705468	chr21:30705468:M	GTTTTTTGTTTGTTTTTTGTTTGTTT	<5.5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:19,19:38:226,0,226	1/1:0,40:40:255,117,0	0/1:22,18:42:196,0,255
+chr21	30707314	chr21:30707314:M	AAAACAAAACAAAACAAA	<4.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:17,21:38:255,0,217	1/1:0,39:39:255,115,0	0/1:16,15:31:191,0,210
+chr21	30713016	chr21:30713016:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:23:255,0,182	1/1:0,34:35:255,105,0	0/1:9,15:25:255,0,166
+chr21	30715751	chr21:30715751:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,1:7:0,2,80	1/1:0,7:7:118,20,0	0/1:3,1:4:5,0,40
+chr21	30716787	chr21:30716787:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,20,177	0/1:9,3:14:10,0,130	0/1:8,3:11:20,0,106
+chr21	30717762	chr21:30717762:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,9,0:23:196,0,255,163,255,255	1/2:0,12,11:23:255,191,125,208,0,142	0/1:9,13,0:25:255,0,207,244,250,255
+chr21	30725133	chr21:30725133:M	ACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:20,0:24:0,63,255	0/1:14,11:38:203,0,255	0/0:28,0:28:0,84,255
+chr21	30727925	chr21:30727925:M	AAGAAGAAAAGAGAGAAGAAG	<6.3>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:21,20:41:255,0,255	1/1:0,40:40:255,120,0	0/1:17,23:40:255,0,255
+chr21	30731863	chr21:30731863:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,23:47:255,0,255	1/1:0,49:49:255,144,0	0/1:25,31:56:255,0,255
+chr21	30752614	chr21:30752614:M	ACACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:9,0:10:0,30,255	0/1:11,6:22:108,0,255	0/0:7,0:9:0,26,228
+chr21	30755257	chr21:30755257:M	CCACAGCCATACCCACAGCCATAGCCAGTTCCATAGCCACAGCCACAGCCAGAGCCAGAGCCATAGCCACAGCCACAGCCGGAGCCATAGCCACAG	<14>	.	.	Motif=CCACAG	GT:AD:DP:PL	1/1:0,4:4:101,12,0	1/1:0,1:1:25,3,0	1/1:0,5:5:125,15,0
+chr21	30763383	chr21:30763383:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:27:127,136,255,0,218,169	0/1:8,16,1:27:255,0,186,255,131,255	0/2:6,2,8:17:119,67,222,0,55,55
+chr21	30767367	chr21:30767367:M	ACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:2,16:18:254,17,0	1/1:2,23:25:255,39,0	1/1:2,16:18:248,17,0
+chr21	30768842	chr21:30768842:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,21:27:255,39,0	1/1:1,18:21:255,44,0	1/1:2,16:19:252,20,0
+chr21	30799212	chr21:30799212:M	AAAAAAAAAAAAAAAAAAAAGAATAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:6:110,15,0	1/1:0,1:2:27,3,0	1/1:0,2:3:55,6,0
+chr21	30800786	chr21:30800786:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,7:7:127,21,0	1/1:0,19:19:255,56,0
+chr21	30803046	chr21:30803046:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,63,0	1/1:0,17:17:255,51,0	1/1:0,10:14:255,33,0
+chr21	30805071	chr21:30805071:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:14:173,4,0	1/1:2,15:18:235,17,0	1/1:0,13:13:233,38,0
+chr21	30806882	chr21:30806882:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,12:34:125,0,255	1/1:2,26:29:255,50,0	0/1:24,11:36:95,0,255
+chr21	30807296	chr21:30807296:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,5,39:44:255,255,255,131,39,0	1/2:0,17,17:36:255,255,210,255,0,188	2/2:0,2,33:36:255,255,255,105,59,0
+chr21	30813491	chr21:30813491:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:169,0,226	0/1:20,17:37:191,0,244	0/1:15,15:30:185,0,185
+chr21	30816279	chr21:30816279:M	CACACACACACACACACACACACACACACACACACACACACACACACA	<21>,<22>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,5,4,0:11:248,64,33,99,0,71,210,53,98,195	1/3:0,9,0,5:17:255,76,88,210,74,183,236,0,146,213	2/2:0,2,17,1:20:255,255,249,57,26,0,255,230,42,255
+chr21	30818841	chr21:30818841:M	AAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20,1:44:255,0,255,255,255,255	0/2:19,0,14:36:255,243,255,0,255,255	0/1:21,6,2:31:99,0,255,70,255,255
+chr21	30820551	chr21:30820551:M	TGGTGGTGGTGCTGGTGGTGATGGTGGTGGTGTTGGT	<13.3>	.	.	Motif=TGG	GT:AD:DP:PL	0/1:11,24:35:184,0,33	0/1:10,13:23:86,0,52	0/1:10,9:19:52,0,64
+chr21	30821072	chr21:30821072:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,27:46:255,0,206	0/1:16,18:34:223,0,187	0/1:23,17:41:195,0,255
+chr21	30824991	chr21:30824991:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,8:20:255,145,169,218,0,255	1/2:2,11,6:20:221,73,116,168,0,255	1/2:0,11,7:19:255,131,152,195,0,255
+chr21	30826652	chr21:30826652:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGATGATAGATACATAGATACATACATAGGTAGATAGATGATAGA	<16.8>,<17.8>	.	.	Motif=GATA	GT:AD:DP:PL	1/2:0,1,1:3:72,12,3,18,0,10	1/1:0,3,0:4:113,9,0,39,7,29	1/2:0,1,3:6:152,33,16,27,0,11
+chr21	30834204	chr21:30834204:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<10.2>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,21:21:255,63,0	1/1:0,15:15:255,45,0
+chr21	30835514	chr21:30835514:M	GAATGAATGAATGAATGAATGAATGAATGAAATGAATGAAT	<12.2>,<13.2>	.	.	Motif=GAAT	GT:AD:DP:PL	1/2:0,11,11:22:255,211,150,211,0,149	1/2:0,9,13:22:255,235,173,163,0,100	2/2:0,0,21:21:255,255,255,63,62,0
+chr21	30841846	chr21:30841846:M	AAAAAAAAAAAAAAAAATTAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:12:182,0,1	1/1:0,1:3:27,3,0	1/1:0,3:7:82,9,0
+chr21	30841882	chr21:30841882:M	AACAACAACAACAACAA	<7.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,20:23:255,30,0	1/1:0,7:8:176,5,0	1/1:1,17:19:255,30,0
+chr21	30842198	chr21:30842198:M	AAAAAAAAAAAACCAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:20:255,40,0	1/1:0,17:17:255,50,0	1/1:1,21:23:255,50,0
+chr21	30847416	chr21:30847416:M	AAAAAAAAAAAATAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:2,28:31:255,55,0	1/1:0,40:40:255,118,0
+chr21	30849697	chr21:30849697:M	CACACACACACACACGCGCGCGCGCACACACACACACACACAC	<23.5>,<33.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,6:8:210,210,210,24,24,0	1/2:0,10,1:14:255,45,15,255,0,255	2/2:0,0,4:5:139,139,139,15,15,0
+chr21	30851142	chr21:30851142:M	ATATATATATATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:6:61,12,0	0/0:0,0:3:0,3,8	.
+chr21	30851163	chr21:30851163:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:78,2,0	1/1:0,1:2:33,5,0	0/1:0,2:3:45,0,3
+chr21	30866162	chr21:30866162:M	ACACACACACACACACACACACACACACACACACACACACA	<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,35,0:36:255,108,0,255,108,255	1/2:0,14,8:23:255,142,177,255,0,255	1/1:0,28,0:29:255,87,0,255,87,255
+chr21	30867730	chr21:30867730:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,8:13:195,97,110,51,0,31	1/2:0,1,1:6:49,14,8,26,0,19	1/2:0,1,1:2:38,14,11,16,0,11
+chr21	30869146	chr21:30869146:M	ATATATATACATATATGTGTATATATATATATATATATATATATAT	<21>,<22>	.	.	Motif=AT	GT:AD:DP:PL	0/2:4,0,5:14:65,77,184,0,72,46	0/0:2,0,0:4:0,11,81,11,62,56	1/2:0,5,6:12:246,90,75,90,0,58
+chr21	30869384	chr21:30869384:M	TGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,3:6:160,38,20,38,0,20	0/0:0,0,0:1:0,3,10,3,12,15	2/2:0,0,2:2:60,30,24,6,6,0
+chr21	30869398	chr21:30869398:M	TATATATATATATATATATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:5:53,13,0	.	1/1:0,1:1:11,3,0
+chr21	30870909	chr21:30870909:M	ACACACACACACACACACACACACACACACAC	<17>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22,1:24:255,68,0,255,41,255	1/2:0,14,13:32:255,255,255,233,0,255	1/1:3,32,3:38:255,54,0,255,30,255
+chr21	30871225	chr21:30871225:M	AAAAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:153,16,0	1/1:0,3:5:102,12,0	1/1:0,1:3:55,9,0
+chr21	30872688	chr21:30872688:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,13:15:255,255,229,42,26,0	2/2:0,1,9:10:254,165,138,27,12,0	1/2:3,10,9:22:255,105,96,97,0,145
+chr21	30876230	chr21:30876230:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:227,40,0	0/1:7,9:16:104,0,71	1/1:2,11:13:156,4,0
+chr21	30879280	chr21:30879280:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:5,33:39:255,13,0	1/1:4,28:36:255,24,0	1/1:0,31:31:255,91,0
+chr21	30888116	chr21:30888116:M	CACACACACACACACACACACACAC	<9.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:25,0:26:0,65,255	0/1:21,17:39:255,0,255	0/0:30,0:32:0,96,255
+chr21	30921538	chr21:30921538:M	AAAAAAAAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,0:36:0,103,255	0/1:22,19:42:221,0,255	0/0:35,1:36:0,88,255
+chr21	30935715	chr21:30935715:M	GGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:8,10:18:128,0,92	1/1:2,11:13:155,4,0	0/1:10,15:25:192,0,104
+chr21	30943175	chr21:30943175:M	TATAAATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,17:17:255,50,0	1/1:0,27:27:255,80,0
+chr21	30957610	chr21:30957610:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:16:255,47,0	1/1:0,21:21:255,63,0	1/1:0,26:32:255,84,0
+chr21	30958092	chr21:30958092:M	ACACACACACACACACACACACACACACACACACACACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:26:255,77,0	1/1:0,19:20:255,60,0	1/1:0,22:26:255,77,0
+chr21	30958483	chr21:30958483:M	GTGTGTGTGTGTGTGTGTGTGTGTTTGTG	<17.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,14:28:255,255,255,255,0,255	1/1:0,33,0:35:255,93,0,255,103,255	1/2:0,11,2:13:255,54,19,255,0,255
+chr21	30959343	chr21:30959343:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:0,5:6:140,15,0	1/1:0,3:4:86,9,0
+chr21	30959443	chr21:30959443:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,87,0	1/1:2,29:33:255,61,0	1/1:4,39:44:255,57,0
+chr21	30968763	chr21:30968763:M	AAAAAAAAAACAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,66,0	1/1:0,27:28:255,82,0	1/1:1,19:21:255,44,0
+chr21	30968939	chr21:30968939:M	GAAAGAGAGAGAGAAAGAAGGAAAGAAAGGAAGGAAAGAA	<7>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:13,3:19:55,0,243	0/0:8,1:10:0,1,156	0/1:9,4:14:62,0,166
+chr21	30974558	chr21:30974558:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:1,29:32:255,76,0	1/1:2,30:32:255,58,0
+chr21	30974987	chr21:30974987:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,17:21:255,7,0	1/1:3,17:22:255,12,0	1/1:1,12:14:193,20,0
+chr21	30977846	chr21:30977846:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:7:89,3,0	1/1:0,3:4:60,11,0	1/1:0,7:7:123,21,0
+chr21	30987664	chr21:30987664:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:8:56,0,28	1/1:0,6:8:120,23,0	0/1:7,3:11:18,0,96
+chr21	30993252	chr21:30993252:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,38:41:255,72,0	1/1:0,34:34:255,102,0	1/1:0,33:33:255,99,0
+chr21	30993277	chr21:30993277:M	TATATATATGTGTATATATAT	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:42,14:59:114,0,255	0/1:20,17:37:209,0,255	0/1:34,14:48:123,0,255
+chr21	30993334	chr21:30993334:M	ACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,25:29:255,56,0	1/1:4,37:42:255,33,0	1/1:1,30:36:255,70,0
+chr21	30999071	chr21:30999071:M	TTTTATTTTATCGTATTTTATTTTATTTTATTTTATTTTA	<9>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:15,8:23:86,0,222	0/1:15,13:28:153,0,190	0/1:11,13:24:173,0,136
+chr21	31009121	chr21:31009121:M	TTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:83,9,0	1/1:0,3:4:81,9,0	1/1:0,2:2:68,6,0
+chr21	31010336	chr21:31010336:M	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	<6.8>	.	.	Motif=AGGA	GT:AD:DP:PL	1/1:0,0:1:0,0,0	1/1:0,6:6:74,17,0	1/1:0,2:4:45,11,0
+chr21	31011348	chr21:31011348:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:206,35,0	1/1:2,18:20:255,25,0	1/1:2,14:17:219,15,0
+chr21	31029267	chr21:31029267:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:11,0,53	0/1:2,4:7:47,0,24	0/0:14,1:16:0,29,234
+chr21	31029387	chr21:31029387:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,21:32:255,0,112	0/1:16,15:31:175,0,192	0/0:29,2:31:0,55,255
+chr21	31029688	chr21:31029688:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:171,17,0	1/1:0,26:28:255,81,0	1/1:1,23:25:255,55,0
+chr21	31042646	chr21:31042646:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,17:36:255,0,255	0/1:14,9:25:147,0,244	1/1:3,25:31:255,16,0
+chr21	31046279	chr21:31046279:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:124,21,0	1/1:0,7:9:119,21,0	1/1:0,11:12:201,35,0
+chr21	31050234	chr21:31050234:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:6:131,61,46,27,0,11	1/2:0,2,3:6:146,58,43,33,0,16	1/2:0,3,0:5:104,19,9,50,0,36
+chr21	31054015	chr21:31054015:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:30:255,51,0	1/1:0,14:18:255,45,0	1/1:0,15:16:255,45,0
+chr21	31055973	chr21:31055973:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,2,20:22:255,255,255,66,29,0	1/2:0,7,10:20:255,175,118,134,0,78	1/2:0,13,11:24:255,192,123,226,0,158
+chr21	31061692	chr21:31061692:M	AAAAAAAAAAAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:18:238,33,0	0/1:8,10:22:102,0,71	1/1:1,18:20:255,39,0
+chr21	31064059	chr21:31064059:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:15:255,44,0	1/1:0,4:6:128,17,0	1/1:0,13:14:255,42,0
+chr21	31069176	chr21:31069176:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	.	0/1:9,3:12:11,0,103	0/0:0,0:1:0,0,0
+chr21	31073487	chr21:31073487:M	AAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,55,0:55:255,165,0,255,165,255	1/2:0,24,15:40:255,255,255,255,0,255	1/1:0,49,0:52:255,153,0,255,150,255
+chr21	31074222	chr21:31074222:M	CACAAACACACACACACACACACACACACACACACACAAACACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,16,1:21:255,61,0,255,42,255	1/2:0,9,7:16:255,116,69,149,0,102	1/1:0,22,0:23:255,67,0,255,65,255
+chr21	31077721	chr21:31077721:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:25:0,55,255	0/1:7,9:19:120,0,75	0/0:22,0:26:0,73,255
+chr21	31082605	chr21:31082605:M	AAAAAAAAAAAAAAGAAAAGAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,8:20:88,0,162	0/1:10,12:23:145,0,109	0/0:18,2:20:0,23,255
+chr21	31086494	chr21:31086494:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<24.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,1:1:35,3,0	1/1:0,3:6:108,9,0	0/0:0,0:2:0,3,21
+chr21	31089047	chr21:31089047:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,6:21:57,0,194	0/1:18,6:27:37,0,253	0/0:16,3:20:0,5,241
+chr21	31089419	chr21:31089419:M	TATATATATAT	<7>,<7.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,4:8:173,37,14,37,0,14	0/2:0,1,1:3:30,0,9,0,6,12	1/1:0,3,1:4:83,12,0,28,1,16
+chr21	31089429	chr21:31089429:M	TTTTTTTTTATTTATTTTTTTTTTTT	<25>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,10,14:27:255,255,255,92,0,255	1/2:0,5,12:17:255,255,255,63,0,104	0/2:5,0,21:28:255,255,255,0,66,39
+chr21	31091878	chr21:31091878:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:5:15,0,32	0/1:2,1:5:17,0,22	0/1:6,3:9:26,0,78
+chr21	31097880	chr21:31097880:M	TTTTTTTTATTTTTTTTTATTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,7:23:67,0,240	0/1:10,18:28:243,0,99	0/0:33,0:33:0,97,255
+chr21	31112362	chr21:31112362:M	TATATATATATATATATATATATATA	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4:7:170,17,0	0/0:0,0:2:0,3,17	0/0:6,0:8:0,24,223
+chr21	31112387	chr21:31112387:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:6,2:9:0,5,39	0/0:2,0:3:0,6,18	0/1:9,4:14:7,0,40
+chr21	31119471	chr21:31119471:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:1,37:41:255,99,0	0/1:14,27:43:255,0,132
+chr21	31119812	chr21:31119812:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,35:38:255,56,0	1/1:3,37:41:255,57,0	0/1:35,16:52:151,0,255
+chr21	31127413	chr21:31127413:M	TTTTTTTTTTTTTTTTTCTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:20:86,0,150	0/1:6,14:22:187,0,50	0/1:10,5:17:47,0,139
+chr21	31135651	chr21:31135651:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,82,0	0/1:13,16:30:195,0,152	0/1:16,16:32:198,0,198
+chr21	31142631	chr21:31142631:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAAGAAAAAGAAAAAGAAAAAAAA	<47>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:10:181,0,24	1/1:0,10:10:255,30,0	0/0:7,0:7:0,21,184
+chr21	31143440	chr21:31143440:M	TATATATAATTTTTATATATATATATA	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:11,10:21:116,0,134	0/0:34,0:34:0,100,255
+chr21	31144831	chr21:31144831:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,8:9:123,9,0	1/1:0,4:4:67,12,0	0/0:1,0:1:0,3,17
+chr21	31146711	chr21:31146711:M	AAAAAAAAAAAAAATGAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,18:22:255,10,0	1/1:3,17:20:239,7,0	0/1:7,9:16:112,0,77
+chr21	31148951	chr21:31148951:M	TTTTTCTTTTTCTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,23:30:255,0,36	0/1:8,25:33:255,0,107	0/1:21,26:47:255,0,255
+chr21	31152022	chr21:31152022:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,1:5:119,26,14,91,0,86	1/2:0,3,2:7:159,55,39,92,0,81	1/2:0,0,3:6:129,89,78,23,0,9
+chr21	31153713	chr21:31153713:M	ATATATATATATATATA	<6.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:26,21,0:47:255,0,255,255,255,255	1/2:1,17,9:27:255,143,212,255,0,255	0/2:21,0,21:42:255,255,255,0,255,255
+chr21	31154062	chr21:31154062:M	AAAAAAACAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:32:176,0,252	0/1:18,20:38:251,0,214	0/0:36,0:37:0,109,255
+chr21	31161036	chr21:31161036:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:20:255,60,0,255,60,255	1/1:0,13,1:19:255,27,0,255,1,255	1/2:0,7,6:15:255,158,151,191,0,173
+chr21	31173503	chr21:31173503:M	AAAGCAAGAAAGAAAGAGAGAGCGAGAGAAAGAGAGAGAGAGAGAGAGAGAAAAGAAAAGAAAGAAAGAAAG	<19>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:6,4:10:44,0,81	0/1:7,2:9:9,0,96	0/0:9,0:9:0,26,163
+chr21	31179547	chr21:31179547:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,1:41:0,101,255	0/1:15,9:27:98,0,193	0/0:38,2:43:0,89,255
+chr21	31179903	chr21:31179903:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,18,144	0/1:1,6:7:140,0,6	0/0:5,0:6:0,15,135
+chr21	31180522	chr21:31180522:M	TTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:36:0,107,255	0/1:18,21:41:255,0,255	0/0:34,0:34:0,102,255
+chr21	31181738	chr21:31181738:M	CTTCTTCTTCTTCTTCTTCTT	<6.3>,<7.3>	.	.	Motif=CTT	GT:AD:DP:PL	0/1:7,4,0:11:71,0,150,58,98,128	0/2:5,0,4:9:31,47,164,0,71,46	1/1:0,7,0:7:181,21,0,123,20,105
+chr21	31183697	chr21:31183697:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,2:29:0,48,255	0/0:21,0:23:0,67,255	0/1:10,5:15:44,0,133
+chr21	31196299	chr21:31196299:M	TTTTCTTTTCTTTTTTCTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:16,0:16:0,47,255	0/1:10,8:20:86,0,141
+chr21	31199533	chr21:31199533:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:25:0,55,255	0/1:9,12:23:160,0,89	0/0:19,2:22:0,28,255
+chr21	31199911	chr21:31199911:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,2:35:0,66,255	0/0:34,3:41:0,67,255	0/1:17,16:34:183,0,210
+chr21	31202389	chr21:31202389:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:12,20:34:251,0,130	0/0:29,0:31:0,90,255
+chr21	31215562	chr21:31215562:M	AAAAAAGAAAAAAAAAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:9,0,20	0/1:1,3:5:47,0,2	0/0:5,0:8:0,21,110
+chr21	31222677	chr21:31222677:M	ATATATATATATATATATATATATATATATAT	<16.5>,<18.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:6,2,3:11:38,36,44,0,17,138	0/0:2,0,0:4:0,5,14,9,23,69	1/2:0,3,1:6:15,7,5,7,0,67
+chr21	31225657	chr21:31225657:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:31:0,55,255	0/1:13,11:26:120,0,154	0/0:26,1:27:0,62,255
+chr21	31226953	chr21:31226953:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:2:0,6,53	0/1:1,3:5:76,0,12	0/0:2,0:2:0,6,53
+chr21	31228078	chr21:31228078:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,3:25:0,15,255	0/1:7,11:19:146,0,66	0/0:17,3:21:0,7,255
+chr21	31228221	chr21:31228221:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,4:7:39,5,0	.	.
+chr21	31232014	chr21:31232014:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,73,255	0/1:16,17:34:200,0,193	0/0:34,0:36:0,105,255
+chr21	31242861	chr21:31242861:M	AAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:3,0,51	0/0:0,0:2:0,3,12	1/1:0,3:3:52,9,0
+chr21	31243193	chr21:31243193:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:10:44,0,46	0/1:2,0:4:14,0,18	1/1:0,8:9:118,23,0
+chr21	31256589	chr21:31256589:M	ACACACACACACACACACACACACACACACACACACACAC	<24>,<25>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6,1:7:175,21,0,104,3,85	1/2:0,9,7:18:255,113,62,161,0,114	1/1:0,4,0:4:110,12,0,77,12,67
+chr21	31258814	chr21:31258814:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,4:17:255,63,24,237,0,191	1/2:0,6,13:19:255,190,172,104,0,50	1/1:0,32,0:33:255,99,0,255,97,255
+chr21	31259124	chr21:31259124:M	TTCTTTTTTTTTTTCCTTTTTCTTTTT	<4.7>	.	.	Motif=TTCTTT	GT:AD:DP:PL	1/1:0,14:14:255,42,0	.	1/1:2,25:27:255,40,0
+chr21	31259625	chr21:31259625:M	AATAAAATAATAATAATAATAATAATAATAAT	<12.7>,<13.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:16,14,0:30:255,0,255,255,255,255	1/2:0,6,3:10:249,64,36,107,0,80	0/0:29,0,0:29:0,87,255,87,255,255
+chr21	31260244	chr21:31260244:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:6,5:12:54,0,81	0/0:23,1:24:0,52,255
+chr21	31260676	chr21:31260676:M	AGAAAAAGAAAGATAAAGAGAAAAGAAAAAAAAAA	<6>	.	.	Motif=AGAAAA	GT:AD:DP:PL	0/1:15,9:24:105,0,226	0/1:17,15:34:200,0,243	1/1:1,16:18:255,27,0
+chr21	31261263	chr21:31261263:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13:34:255,0,255	1/1:1,15:17:255,21,0	0/0:20,0:21:0,63,255
+chr21	31262935	chr21:31262935:M	AAAAAAAAAGAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:21,24:46:255,0,255	0/0:53,0:55:0,159,255
+chr21	31267517	chr21:31267517:M	TTTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:21,0,12:35:114,209,255,0,255,255	1/2:1,24,4:34:255,56,39,255,0,255	0/0:27,1,0:32:0,56,255,90,255,255
+chr21	31269672	chr21:31269672:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,1:8:0,7,96	0/1:4,8:13:97,0,24	0/1:11,3:15:4,0,141
+chr21	31275127	chr21:31275127:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:23:0,49,255	0/1:16,12:30:133,0,201	0/0:18,1:23:0,48,255
+chr21	31281086	chr21:31281086:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:9:73,0,24	0/0:4,1:6:0,1,59	0/1:4,4:11:54,0,37
+chr21	31283538	chr21:31283538:M	TTTATTTATTTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/0:36,0:36:0,106,255	0/1:18,19:37:250,0,230
+chr21	31290647	chr21:31290647:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:59,59,59,6,6,0	1/1:0,3,0:4:109,12,0,109,12,109	0/2:1,0,5:8:153,154,181,0,29,8
+chr21	31298736	chr21:31298736:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,8,0:25:150,0,255,130,255,255	0/2:15,3,9:30:208,92,255,0,255,255	0/1:10,12,1:25:255,0,209,175,241,255
+chr21	31301842	chr21:31301842:M	AAATAAATAGATAAATAGATAAATAAATAAATAAA	<9.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:6,7:14:76,0,64	0/1:2,1:4:5,0,26	0/1:12,6:19:43,0,145
+chr21	31305417	chr21:31305417:M	AAAAATAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:30:203,0,167	0/1:13,18:31:220,0,134	0/1:9,17:27:234,0,82
+chr21	31311151	chr21:31311151:M	GTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTTTGT	<8.5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:14,10:24:153,0,241	0/1:17,13:31:203,0,255	0/1:16,17:33:255,0,255
+chr21	31321335	chr21:31321335:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.2>	.	.	Motif=TGTT	GT:AD:DP:PL	0/1:9,21:30:255,0,161	0/1:12,12:24:255,0,255	0/1:14,17:32:255,0,255
+chr21	31325287	chr21:31325287:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,10:27:197,0,255	0/1:15,19:34:255,0,255	0/1:18,16:35:255,0,255
+chr21	31327644	chr21:31327644:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:10:5,0,100	0/1:3,4:8:42,0,36	1/1:1,4:6:58,0,0
+chr21	31334290	chr21:31334290:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,23:25:255,72,0	0/1:14,8:23:88,0,186
+chr21	31335706	chr21:31335706:M	AAAAAAAAAGAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:31:0,90,255	0/0:25,0:27:0,75,255	0/1:17,9:28:160,0,255
+chr21	31336489	chr21:31336489:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:2,0,55	0/1:6,4:10:37,0,70	0/1:3,4:9:62,0,25
+chr21	31337501	chr21:31337501:M	TTATTATTATTATTGTTGTTATTATTATTATTATTATTATTATTATT	<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/0:13,0:14:0,38,211	0/1:22,11:34:88,0,255
+chr21	31352546	chr21:31352546:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:18:37,0,146	0/1:7,6:13:64,0,81	0/0:24,1:27:0,61,255
+chr21	31355174	chr21:31355174:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,22,178	0/1:4,11:18:141,0,14	0/1:5,2:8:12,0,59
+chr21	31355525	chr21:31355525:M	TTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<9.2>,<12.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:7,8,0:15:226,0,159,252,133,255	1/2:0,8,3:11:255,55,66,237,0,236	0/2:9,0,6:15:71,115,255,0,168,126
+chr21	31359806	chr21:31359806:M	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGAA	<16.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:4,4:9:82,0,82	0/1:3,9:13:200,0,43	0/1:2,8:11:177,0,23
+chr21	31361838	chr21:31361838:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<10>,<12>	.	.	Motif=TAGA	GT:AD:DP:PL	0/2:16,0,17:33:213,255,255,0,247,195	0/1:16,27,0:43:255,0,151,255,232,255	0/2:10,0,13:23:165,229,255,0,149,110
+chr21	31362446	chr21:31362446:M	ATTATTATTATTATTATTATTATTATTATTATTAT	<13.7>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,8:22:155,0,255	0/0:8,0:9:0,24,219	1/1:0,9:9:248,27,0
+chr21	31366086	chr21:31366086:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,3,11	0/1:2,3:5:67,0,40	0/1:1,1:2:22,0,22
+chr21	31377184	chr21:31377184:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,15:30:255,255,185,255,0,176	1/2:0,11,9:22:255,154,91,206,0,148	2/2:0,2,14:16:255,255,214,47,12,0
+chr21	31384402	chr21:31384402:M	AAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5,1:14:59,0,102,57,123,255	0/2:4,2,4:13:105,56,104,0,48,95	0/2:7,2,2:14:24,5,111,0,107,190
+chr21	31385718	chr21:31385718:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,4:26:0,2,255	0/1:14,4:18:17,0,192	0/1:12,11:24:129,0,157
+chr21	31387196	chr21:31387196:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:146,15,0	1/1:0,7:8:210,22,0	0/0:1,0:1:0,3,29
+chr21	31388213	chr21:31388213:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<16>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:5,0,16:23:255,189,255,0,142,96	1/2:0,15,12:29:255,150,64,187,0,102	0/0:4,0,0:5:0,12,121,12,121,121
+chr21	31388480	chr21:31388480:M	AAAATAAATGAAATAAAATAAAATAAAATAAA	<7.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:11,9:20:104,0,140	0/1:14,11:25:132,0,188
+chr21	31392571	chr21:31392571:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:166,17,0	0/1:2,7:10:96,0,5	0/1:2,3:5:37,0,19
+chr21	31392959	chr21:31392959:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:30:192,0,179	1/1:2,22:26:255,41,0	0/0:19,2:24:0,33,255
+chr21	31394688	chr21:31394688:M	TCTCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTC	<12>,<22>,<24>,<25>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,0,3,6,0:11:173,197,255,105,109,78,30,58,0,26,96,149,55,53,121	2/4:3,0,5,3,5:18:189,220,255,132,165,122,42,160,24,111,25,189,0,101,149	1/3:0,6,0,6,0:16:255,147,146,251,102,237,151,0,151,134,203,52,200,148,186
+chr21	31394729	chr21:31394729:M	CACACACACACACACACACACACACACACACACACACACACACACAC	<19.5>,<21.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,3,3:12:160,142,172,81,101,89,83,77,0,102	0/3:3,0,0,3:8:90,102,187,102,171,165,0,79,64,63	1/2:0,8,5,0:22:255,112,61,245,0,197,255,123,245,255
+chr21	31395238	chr21:31395238:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:33:185,0,242	0/1:16,19:35:234,0,181	0/0:30,1:34:0,71,255
+chr21	31406181	chr21:31406181:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/0:29,2:31:0,56,255	0/1:17,9:26:84,0,228
+chr21	31409108	chr21:31409108:M	TTTTCTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/0:12,0:13:0,39,255	0/1:4,13:19:255,0,69
+chr21	31410087	chr21:31410087:M	GTGTGTGTGTGTGTGTGAGGTTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:31,0:33:0,96,255	0/1:17,7:24:59,0,246
+chr21	31410487	chr21:31410487:M	GTGTGTGTGATAGTGTGTATGTGTATGTG	<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,24:24:255,71,0	1/1:0,34:34:255,100,0
+chr21	31411472	chr21:31411472:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:11:15,0,100	0/1:3,5:9:68,0,24	0/1:2,5:11:74,0,24
+chr21	31412785	chr21:31412785:M	AAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,3,13	0/0:2,0:3:0,9,74	0/1:2,11:17:255,0,26
+chr21	31423701	chr21:31423701:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,4,32	0/0:1,0:2:0,3,31	1/1:0,19:19:255,57,0
+chr21	31428883	chr21:31428883:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:26:0,55,255	0/0:15,2:22:0,18,255	0/1:13,12:27:158,0,155
+chr21	31428893	chr21:31428893:M	AAAAGTAAAAGTAAA	<1.8>	.	.	Motif=AAAAGT	GT:AD:DP:PL	0/0:26,2:28:0,40,255	0/1:20,7:27:71,0,255	0/1:31,6:37:19,0,255
+chr21	31430211	chr21:31430211:M	AAAAAAAAAAAAAAAA	<11>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,19:24:178,241,255,21,67,0	2/2:0,0,3:7:72,73,130,18,15,0	0/1:1,5,2:12:121,0,91,106,5,128
+chr21	31430226	chr21:31430226:M	ATATATATATATATATATATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,0:16:1,0,102	0/0:5,0:6:0,16,71	1/1:3,6:16:106,7,0
+chr21	31430274	chr21:31430274:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/0:31,0:32:0,86,255	0/0:17,0:17:0,46,190	0/1:9,14:25:115,0,34
+chr21	31438180	chr21:31438180:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,14	0/0:0,0:1:0,3,17	1/1:0,13:14:255,42,0
+chr21	31441886	chr21:31441886:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,45,0	1/1:1,13:17:255,19,0	0/1:20,5:27:68,0,255
+chr21	31442071	chr21:31442071:M	ATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:4:47,11,0	.	0/0:17,0:17:0,51,255
+chr21	31445017	chr21:31445017:M	AGAACAGAAGAGAAGAGAAAAGAAAGAACAGAA	<7.8>	.	.	Motif=AGAAC	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,19:19:255,57,0	1/1:0,28:28:255,84,0
+chr21	31448610	chr21:31448610:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:21:220,0,13	0/1:8,8:18:98,0,89	0/1:7,9:16:113,0,78
+chr21	31451710	chr21:31451710:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<23>,<24>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,10,8:18:255,134,83,168,0,117	2/2:0,3,16:19:255,255,211,56,7,0	1/2:0,9,10:19:255,164,111,149,0,94
+chr21	31453691	chr21:31453691:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<8.5>,<9.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,25,0:25:255,75,0,255,74,255	1/2:0,5,3:8:210,54,31,90,0,68	1/2:0,11,10:21:255,186,127,205,0,146
+chr21	31455280	chr21:31455280:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,2,2:6:50,5,31,11,0,20	1/2:0,3,2:5:99,28,19,49,0,35	2/2:0,0,3:3:51,51,51,9,9,0
+chr21	31455417	chr21:31455417:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:143,0,217	1/1:0,29:29:255,85,0	0/1:14,13:28:165,0,174
+chr21	31462730	chr21:31462730:M	TTTTTTGTTTTTTTTTTTTGTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,24:25:255,56,0	1/1:0,9:10:163,29,0	1/1:1,16:19:255,37,0
+chr21	31463813	chr21:31463813:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:19:134,0,90	0/0:22,0:23:0,67,255	0/1:15,10:28:104,0,205
+chr21	31464846	chr21:31464846:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,6:15:117,0,173	1/1:0,7:9:196,24,0	0/1:9,3:14:43,0,205
+chr21	31465576	chr21:31465576:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:20:119,0,128	1/1:2,16:18:247,18,0	0/1:17,9:26:88,0,233
+chr21	31468086	chr21:31468086:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,12:23:158,0,116	1/1:0,25:25:255,73,0	0/1:10,9:19:105,0,122
+chr21	31469080	chr21:31469080:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:9:92,46,74,53,0,90	1/1:0,5,0:8:107,20,0,122,21,168	0/1:3,4,2:10:52,0,45,44,9,115
+chr21	31470002	chr21:31470002:M	TTTTTTTTTTTTTTTTTT	<14>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,9:19:255,164,200,247,0,220	1/1:0,24,0:25:255,75,0,255,75,255	1/2:1,13,8:22:255,125,177,255,0,255
+chr21	31471871	chr21:31471871:M	AATAATAATAATAATAATAATAATAATAATAA	<9.3>,<11.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/2:0,18,16:34:255,255,255,255,0,255	1/1:0,32,0:32:255,96,0,255,96,255	1/2:0,19,9:28:255,168,184,255,0,255
+chr21	31474547	chr21:31474547:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,11:21:247,0,184	1/1:0,34:36:255,102,0	0/1:7,15:24:255,0,121
+chr21	31475026	chr21:31475026:M	TTATTATTATTATTATTATTATTATTATTATTATTATT	<13.3>,<16.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,11,8:20:255,236,204,255,0,255	1/1:0,4,0:5:99,9,0,110,15,138	1/2:0,0,4:6:139,119,113,20,0,8
+chr21	31477475	chr21:31477475:M	TTTTTTTTTTTTTTTTTT	<15>,<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,10,2:13:255,229,211,53,62,32,255,176,0,255	1/2:0,14,10,0:25:255,170,110,235,0,165,255,181,237,255	2/3:0,0,9,5:15:255,255,255,127,132,103,236,165,0,237
+chr21	31482061	chr21:31482061:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<15>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,23,21:46:255,255,255,255,0,255	1/1:0,31,0:34:255,99,0,255,99,255	1/2:0,12,27:39:255,255,255,255,0,238
+chr21	31487538	chr21:31487538:M	TTTTTTTTTTTTTTGTATTTTTTTTTTTTTT	<29>,<30>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:181,181,181,29,29,0	1/2:0,2,4:6:105,57,51,34,0,17	1/2:0,3,3:6:119,45,36,52,0,36
+chr21	31489007	chr21:31489007:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,13:40:128,0,255	1/1:0,33:33:255,97,0	0/1:17,24:42:255,0,190
+chr21	31489495	chr21:31489495:M	GAGGGAGGGAGACAGGGAGGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGA	<13.8>	.	.	Motif=GAGG	GT:AD:DP:PL	0/0:8,0:9:0,24,102	0/1:7,4:11:15,0,49	0/0:6,0:7:0,19,79
+chr21	31489572	chr21:31489572:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	1/1:2,19:21:255,24,0	1/1:0,17:17:255,50,0	1/1:1,24:25:255,55,0
+chr21	31491150	chr21:31491150:M	AAGGAAGGGAAGGAAGGGAAGGAAGGAAGGA	<10>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:10,10:20:223,0,221	1/1:0,28:28:255,84,0	0/1:14,10:24:217,0,255
+chr21	31492042	chr21:31492042:M	TATGTGTGTATATATATATGTGATGTGTGTATATATGTATGTAT	<11.5>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:14,19:37:109,0,66	1/1:0,26:31:255,57,0	0/1:17,12:30:49,0,101
+chr21	31496460	chr21:31496460:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,3:12:255,51,17,129,0,102	1/1:0,4,1:6:142,17,0,77,1,62	1/1:0,2,0:3:73,9,0,52,9,46
+chr21	31499869	chr21:31499869:M	AAAACAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:31:255,91,0	1/1:0,28:31:255,86,0	1/1:0,36:36:255,105,0
+chr21	31500167	chr21:31500167:M	AAAATAAAATAAAATAAATAAAA	<4.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:31,0:31:0,93,255	0/1:15,19:34:255,0,239
+chr21	31506011	chr21:31506011:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,3:8:161,44,29,80,0,59	1/1:0,9,0:10:255,28,0,176,27,151	1/1:0,5,0:7:156,19,0,112,18,98
+chr21	31506262	chr21:31506262:M	ACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,12:25:255,225,152,245,0,172	1/1:0,33,0:38:255,113,0,255,111,255	1/2:0,17,15:32:255,255,182,255,0,219
+chr21	31508388	chr21:31508388:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:19:123,0,106	0/1:7,2:10:5,0,101	0/1:4,12:16:164,0,23
+chr21	31510815	chr21:31510815:M	AAAAAAAAAAAAACAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:24:255,53,0	1/1:3,32:35:255,50,0	1/1:2,30:34:255,63,0
+chr21	31519509	chr21:31519509:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:8:94,5,0	1/1:0,5:5:84,15,0	0/1:1,2:5:27,0,7
+chr21	31521737	chr21:31521737:M	CACACACAAACACACACACACACACACACACACACACACACA	<23>,<25>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,4,8:13:255,214,196,108,0,82	2/2:0,0,14:14:255,255,255,42,42,0	1/2:0,6,8:16:255,207,183,158,0,138
+chr21	31524017	chr21:31524017:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:30:116,0,255	0/0:29,1:31:0,73,255	0/1:12,14:27:176,0,150
+chr21	31525368	chr21:31525368:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,35,243	0/1:14,5:19:29,0,183	0/0:20,0:21:0,61,255
+chr21	31526034	chr21:31526034:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:162,14,0	1/1:0,6:7:114,20,0	1/1:0,8:10:161,29,0
+chr21	31528829	chr21:31528829:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:41:255,121,0	1/1:0,43:44:255,129,0	1/1:0,48:49:255,144,0
+chr21	31531761	chr21:31531761:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,21:34:255,0,105	0/0:35,2:38:0,76,255	1/1:3,33:39:255,59,0
+chr21	31537443	chr21:31537443:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,19:27:255,0,134	0/0:14,0:20:0,39,255	1/1:0,20:22:255,63,0
+chr21	31539271	chr21:31539271:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:196,0,205	1/1:1,21:22:255,47,0	0/0:26,0:27:0,79,255
+chr21	31540386	chr21:31540386:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:16:0,46,255	0/1:10,4:16:21,0,141	0/0:25,1:27:0,62,255
+chr21	31542427	chr21:31542427:M	AAAAAAAAAGAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:138,0,157	0/0:20,0:20:0,59,255	1/1:3,32:35:255,49,0
+chr21	31546188	chr21:31546188:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,19:37:255,255,255,255,0,191	1/1:0,24,0:24:255,72,0,255,71,255	2/2:0,0,28:28:255,255,255,83,83,0
+chr21	31546557	chr21:31546557:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<6.8>,<9.8>,<10.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/3:0,8,0,7:17:255,204,175,255,131,255,172,0,255,238	1/1:0,22,0,0:28:255,81,0,255,83,255,255,83,255,255	2/3:0,0,15,16:31:255,255,255,255,255,203,255,255,0,185
+chr21	31548133	chr21:31548133:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:6:103,0,12	1/1:0,0:2:15,3,0	1/1:0,4:5:142,13,0
+chr21	31548482	chr21:31548482:M	TTGTTGTTGTT	<4>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:12,2:14:0,17,85	1/1:1,3:4:17,1,0	0/0:30,0:31:0,72,253
+chr21	31552049	chr21:31552049:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	1/1:0,3:3:90,9,0	0/0:0,0:1:0,3,11
+chr21	31555187	chr21:31555187:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,15:32:185,0,218	1/1:0,35:35:255,103,0	0/0:31,0:33:0,94,255
+chr21	31556536	chr21:31556536:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,28:54:255,0,255	0/0:38,1:39:0,97,255	1/1:1,50:51:255,132,0
+chr21	31562564	chr21:31562564:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,20:21:255,63,0	1/1:0,19:22:255,65,0
+chr21	31564537	chr21:31564537:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,2,4:9:83,46,101,35,0,57	0/1:3,3,0:8:67,0,64,83,54,143	0/2:2,0,2:4:23,34,103,0,34,22
+chr21	31565032	chr21:31565032:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:12:55,0,89	0/0:15,1:17:0,22,227	1/1:1,16:19:255,37,0
+chr21	31566411	chr21:31566411:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,20:26:255,37,0	1/1:0,14:16:222,45,0	1/1:1,15:22:234,39,0
+chr21	31567031	chr21:31567031:M	TCTCTGTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:21,21:42:255,0,255	0/0:31,1:32:0,69,255	1/1:0,29:30:255,90,0
+chr21	31567529	chr21:31567529:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,7:33:43,0,255	1/1:0,24:26:255,63,0	0/0:39,0:40:0,117,255
+chr21	31569074	chr21:31569074:M	TTTTAATTTTATTTTTTTTTTA	<3.8>	.	.	Motif=TTTTAT	GT:AD:DP:PL	0/1:22,13:35:185,0,255	1/1:2,29:31:255,47,0	0/0:32,1:33:0,78,255
+chr21	31570685	chr21:31570685:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:41:185,0,255	1/1:2,14:16:203,13,0	0/0:24,2:30:0,51,255
+chr21	31571656	chr21:31571656:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,9:19:176,0,176	1/1:0,14:15:255,32,0	0/0:10,0:12:0,30,254
+chr21	31571668	chr21:31571668:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:2:0,3,23	0/1:3,3:6:51,0,51	1/1:0,0:2:17,3,0
+chr21	31574170	chr21:31574170:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:5:28,0,13	1/1:1,9:11:122,15,0	0/1:2,1:5:1,0,37
+chr21	31574614	chr21:31574614:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:8:121,0,28	0/1:2,3:8:94,0,34	0/1:1,2:6:51,0,26
+chr21	31577048	chr21:31577048:M	AAAAACAAAAAACAAACAAACAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,241	1/1:1,30:31:255,73,0	0/0:35,0:35:0,103,255
+chr21	31579809	chr21:31579809:M	AAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:3:11,3,0	1/1:0,3:4:101,12,0	0/0:0,0:1:0,0,0
+chr21	31585776	chr21:31585776:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,10:15:255,148,133,77,0,37	1/2:2,3,7:13:142,65,104,24,0,23	2/2:1,2,9:12:161,113,131,17,0,0
+chr21	31585937	chr21:31585937:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:6:72,0,0	0/1:2,8:11:115,0,2	1/1:0,10:10:176,29,0
+chr21	31587279	chr21:31587279:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,41:42:255,106,0	1/1:0,50:50:255,147,0	1/1:1,36:37:255,91,0
+chr21	31587931	chr21:31587931:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:19:255,54,0	1/1:0,19:23:255,68,0	1/1:0,25:25:255,75,0
+chr21	31588097	chr21:31588097:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:101,18,6,53,0,42	1/2:0,3,1:4:101,17,5,50,0,39	1/2:0,1,3:4:100,52,41,17,0,6
+chr21	31590020	chr21:31590020:M	ACACACACACATACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,19:20:255,57,0	1/1:0,21:21:255,63,0	1/1:0,12:13:255,36,0
+chr21	31590832	chr21:31590832:M	GGGGTGGGGGGCGGGGGGGAGGGGGGGGG	<22>,<28>	.	.	Motif=G	GT:AD:DP:PL	0/1:5,3,0:8:60,0,117,75,91,153	0/2:6,0,7:13:85,121,255,0,103,67	1/1:0,11,0:11:255,33,0,255,33,255
+chr21	31591568	chr21:31591568:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,3:19:29,36,235,0,228,255	0/1:12,10,1:24:110,0,144,125,192,255	2/2:0,2,16:20:255,255,255,53,23,0
+chr21	31592291	chr21:31592291:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14,0:32:170,0,245,255,255,255	0/2:18,0,22:41:255,255,255,0,255,200	1/1:0,43,0:44:255,129,0,255,132,255
+chr21	31593928	chr21:31593928:M	TTTTTTTTTTTTTTTCTTTTTTTTTT	<23>,<27>,<28>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,7,5:14:197,227,255,52,88,47,69,140,0,104	1/2:0,14,6,0:21:255,99,130,255,0,255,255,99,255,255	3/3:0,0,0,10:10:255,255,255,198,199,171,30,30,29,0
+chr21	31595480	chr21:31595480:M	TTTTTTTTTCTTTTCTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,12:29:139,0,237	0/1:14,17:31:209,0,156	0/0:38,0:38:0,112,255
+chr21	31599363	chr21:31599363:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:5:22,0,8	0/1:1,4:8:50,0,11	0/0:0,0:2:0,0,0
+chr21	31601432	chr21:31601432:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,15:26:255,231,198,189,0,118	0/1:7,4,4:16:87,0,164,18,62,97	1/1:0,21,2:27:255,74,0,255,42,255
+chr21	31602226	chr21:31602226:M	AAAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,9,88	0/1:5,12:19:255,0,104	.
+chr21	31602592	chr21:31602592:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:23:0,49,255	0/0:11,1:13:0,20,179	0/1:12,7:21:82,0,150
+chr21	31603593	chr21:31603593:M	ACACACACACACACACACACACACACAC	<13>,<15>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,16,0,11:31:255,255,255,255,255,255,255,0,255,255	1/2:3,16,14,0:33:255,195,255,230,0,255,255,255,255,255	3/3:0,0,0,22:25:255,255,255,255,255,255,74,74,74,0
+chr21	31606993	chr21:31606993:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:26:168,0,168	0/0:28,2:31:0,55,255	1/1:1,36:37:255,91,0
+chr21	31607875	chr21:31607875:M	AAGAAAAAAAAAAAGAAATAAATAAAGAAAGAAAGAGAGAGATGGACAGAGAGAAAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAGAAAGA	<8.5>	.	.	Motif=AAGA	GT:AD:DP:PL	1/1:0,5:5:114,15,0	1/1:0,2:2:48,6,0	1/1:0,2:2:44,6,0
+chr21	31608132	chr21:31608132:M	TTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:10,8:19:83,0,117	0/0:25,0:27:0,73,255	1/1:0,24:24:255,70,0
+chr21	31612588	chr21:31612588:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:10:52,0,138	0/0:10,0:13:0,27,255	1/1:0,2:2:53,6,0
+chr21	31616857	chr21:31616857:M	TTTTTTCTTTTTATTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:247,0,255	0/1:16,13:29:255,0,255	1/1:0,24:24:255,72,0
+chr21	31618324	chr21:31618324:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,4:5:123,15,0	0/1:1,0:2:5,0,23
+chr21	31620706	chr21:31620706:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,2:19:0,20,255	0/0:23,2:25:0,39,255	0/1:11,4:16:23,0,163
+chr21	31622131	chr21:31622131:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATA	<9>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,2,4:11:163,83,66,41,0,24	2/2:0,0,0:1:0,0,0,0,0,0	1/2:0,4,1:6:159,22,4,88,0,71
+chr21	31629079	chr21:31629079:M	AAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,13:22:255,0,151	0/0:26,0:30:0,88,255	1/1:0,31:36:255,106,0
+chr21	31631721	chr21:31631721:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:0,29:30:255,88,0	1/1:0,28:28:255,82,0
+chr21	31632640	chr21:31632640:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:18:4,0,197	0/1:16,6:24:35,0,232	0/1:2,9:11:131,0,4
+chr21	31633645	chr21:31633645:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,21:36:255,0,176	0/1:23,27:50:255,0,255	1/1:1,45:47:255,120,0
+chr21	31634123	chr21:31634123:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14:16:255,42,0	1/1:0,18:21:255,48,0	1/1:0,15:18:255,45,0
+chr21	31634730	chr21:31634730:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2,0:3:49,0,19,34,25,53	0/2:1,0,3:4:74,49,65,0,24,15	1/1:0,5,1:6:169,18,0,86,1,69
+chr21	31634920	chr21:31634920:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,4,16:33:255,222,255,0,160,255	0/1:19,10,1:31:95,0,250,128,255,255	2/2:0,3,23:27:255,255,255,72,26,0
+chr21	31636513	chr21:31636513:M	TTTTTGTTTTGTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20:22:255,29,0	1/1:0,10:14:171,29,0	1/1:1,18:19:255,38,0
+chr21	31637234	chr21:31637234:M	TTATTATTTATTATTATTAATATTATTATTATT	<9>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:6,8:14:175,0,119	0/0:31,0:31:0,93,255
+chr21	31641109	chr21:31641109:M	TTTTTTTTTTGTTGTTTTTTTTTGTTTTGTTTTTTTTTT	<38>,<49>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:21:255,62,0,255,63,255	1/2:0,8,5:15:255,140,114,146,0,199	1/1:0,24,0:24:255,71,0,255,72,255
+chr21	31643999	chr21:31643999:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:7:47,0,30	0/1:1,2:4:21,0,16	1/1:1,6:8:93,7,0
+chr21	31650075	chr21:31650075:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:129,0,95	0/1:6,11:18:145,0,50	1/1:1,19:21:255,44,0
+chr21	31652835	chr21:31652835:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:51,2:54:0,122,255	0/1:6,14:21:191,0,43	0/0:45,2:49:0,108,255
+chr21	31652917	chr21:31652917:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:4:9,0,19	0/1:2,4:8:58,0,13	0/1:3,7:11:100,0,20
+chr21	31653960	chr21:31653960:M	AAAAAATAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:24,13:37:125,0,255	0/0:28,0:28:0,83,255
+chr21	31663120	chr21:31663120:M	TTTTTCTTTTTTTTTTTTT	<13>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,14,0:22:255,0,135,255,120,255	0/2:10,0,10:23:110,176,255,0,206,146	1/1:0,18,0:23:255,66,0,255,66,255
+chr21	31665971	chr21:31665971:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:17,0,23	0/1:7,2:9:6,0,88	1/1:0,6:7:100,18,0
+chr21	31670629	chr21:31670629:M	CACAGACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,21:43:255,0,255	0/0:41,1:43:0,106,255	1/1:0,51:51:255,150,0
+chr21	31671109	chr21:31671109:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,3,12:35:114,159,255,0,249,255	0/1:9,10,1:22:130,0,101,170,112,255	0/2:3,0,13:16:182,225,255,0,45,6
+chr21	31682377	chr21:31682377:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:26:107,0,198	0/0:30,1:33:0,79,255	1/1:1,31:35:255,84,0
+chr21	31683710	chr21:31683710:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/1:17,26:48:255,0,181	0/0:33,1:36:0,87,255
+chr21	31684992	chr21:31684992:M	GGGGGGGTGGGGGGGGGGTGGGG	<22>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,15:15:255,44,0	0/1:8,4:12:35,0,101	1/1:0,15:16:255,47,0
+chr21	31686204	chr21:31686204:M	AAAAAAAAAAAAAGAAAAAAAAAAAAAA	<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,9:14:117,132,255,0,87,47	0/1:3,10,0:14:239,0,41,170,48,185	2/2:1,0,10:12:155,150,171,15,24,0
+chr21	31689465	chr21:31689465:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,20:31:255,0,161	0/0:15,0:16:0,45,255	1/1:0,16:18:255,48,0
+chr21	31691673	chr21:31691673:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,1,7:19:91,121,255,0,119,119	1/1:3,18,0:24:255,18,0,255,62,255	0/2:5,1,17:24:240,255,255,0,57,28
+chr21	31699503	chr21:31699503:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,0:42:0,120,255	0/1:13,22:38:255,0,247	0/0:38,0:42:0,120,255
+chr21	31702509	chr21:31702509:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,0:45:0,133,255	0/1:18,11:29:114,0,236	0/0:52,1:53:0,137,255
+chr21	31704533	chr21:31704533:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:25,21:49:234,0,255	0/0:49,2:52:0,117,255
+chr21	31709351	chr21:31709351:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,5:30:51,0,255	0/0:30,0:32:0,96,255	1/1:0,6:10:178,5,0
+chr21	31709855	chr21:31709855:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,1:40:0,100,255	0/1:25,13:39:120,0,255	0/0:44,2:46:0,100,255
+chr21	31712223	chr21:31712223:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,25:26:255,255,255,58,75,0	1/2:2,10,10:23:255,140,223,148,0,230	2/2:3,0,16:19:230,255,255,3,48,0
+chr21	31712528	chr21:31712528:M	TTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,5:11:68,88,250,0,86,58	0/1:8,5,3:16:95,0,220,73,85,176	2/2:1,0,13:14:210,247,255,24,42,0
+chr21	31713747	chr21:31713747:M	GGGGTGGGGTGGGGGGGG	<3.8>	.	.	Motif=GGGGT	GT:AD:DP:PL	0/1:19,12:31:204,0,255	0/0:30,1:31:0,68,255	1/1:0,19:19:255,57,0
+chr21	31717827	chr21:31717827:M	ATATATATATATATATA	<13.5>,<14.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,4,3,0:23:140,0,255,20,255,255,179,255,255,255	0/3:10,0,0,5:18:14,52,255,52,255,255,0,255,255,255	1/2:0,11,9,0:21:255,104,41,134,0,73,255,104,134,255
+chr21	31723611	chr21:31723611:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,18:35:192,0,150	0/0:22,0:30:0,63,255	1/1:0,27:28:255,70,0
+chr21	31732180	chr21:31732180:M	GCCCCGCCCCCTCCCCGCCTCGTCCCGCCCTGCGCCGCCCTGCACCGCCCCGC	<10.8>	.	.	Motif=GCCCC	GT:AD:DP:PL	0/1:4,7:11:46,0,13	0/1:8,4:12:11,0,54	0/0:7,0:7:0,19,75
+chr21	31735264	chr21:31735264:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:3:30,3,0	.	1/1:0,6:8:187,24,0
+chr21	31737397	chr21:31737397:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:21:32,0,235	0/1:9,2:12:2,0,126	0/1:4,10:14:141,0,32
+chr21	31737562	chr21:31737562:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2,2:8:13,0,69,0,25,71	0/1:12,9,2:26:111,0,148,144,137,255	0/2:2,1,9:13:130,146,243,0,13,8
+chr21	31739170	chr21:31739170:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,2:26:0,39,255	0/1:19,18:43:238,0,214	0/0:49,1:51:0,124,255
+chr21	31739889	chr21:31739889:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:6:0,18,107	0/0:6,1:7:0,3,85	0/1:5,3:9:26,0,70
+chr21	31740692	chr21:31740692:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0,0:4:0,12,83,6,64,58	0/1:4,3,0:9:76,0,95,93,110,214	0/2:1,0,7:9:201,213,255,0,26,3
+chr21	31742780	chr21:31742780:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,12	1/1:0,2:4:30,4,0	0/1:1,3:5:38,0,14
+chr21	31745357	chr21:31745357:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:23:143,0,135	0/0:35,2:39:0,69,255	1/1:2,19:21:255,26,0
+chr21	31746683	chr21:31746683:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,10:16:255,174,150,45,0,38	2/2:0,0,11:11:255,223,193,33,32,0	1/1:2,15,2:19:255,19,0,211,19,255
+chr21	31746848	chr21:31746848:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:34,0,35	0/1:4,6:13:81,0,39	0/0:8,0:11:0,19,137
+chr21	31748867	chr21:31748867:M	TTTTCTTTTTCTTTTCTTTCCTTTTTTTTTTTTTTTTTTTT	<6.5>,<7.2>	.	.	Motif=TTTTCT	GT:AD:DP:PL	2/2:0,0,3:3:74,74,75,9,9,0	1/1:0,4,0:4:100,12,0,101,12,102	0/0:1,0,0:1:0,3,27,3,27,27
+chr21	31749973	chr21:31749973:M	AAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:30:180,0,255	0/1:15,7:25:114,0,255	1/1:0,14:15:255,42,0
+chr21	31750467	chr21:31750467:M	TTTTTTCTTTTCTTTTCTTTTCGTTTTTTTTTTTTTTTTTT	<40>,<42>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,13:14:242,255,255,41,42,0	1/2:1,4,2:9:84,19,32,70,0,110	2/2:1,0,19:21:255,255,255,44,60,0
+chr21	31751658	chr21:31751658:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,21,2:25:255,37,0,255,38,255	1/2:2,7,4:14:162,40,37,64,0,98	1/1:1,17,1:19:255,38,0,255,38,255
+chr21	31753782	chr21:31753782:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,16:19:255,255,255,78,0,29	1/2:1,5,15:22:255,228,255,129,0,93	1/1:0,6,0:6:178,18,0,174,18,171
+chr21	31753798	chr21:31753798:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,16:33:119,0,91	0/0:15,1:16:0,32,165	1/1:0,30:35:255,95,0
+chr21	31757605	chr21:31757605:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,8:13:94,109,231,0,81,44	0/1:3,5,2:11:117,0,59,53,20,72	2/2:2,0,14:16:195,201,248,14,46,0
+chr21	31761135	chr21:31761135:M	TCTCTCCCTCCCTCTCTCCCTCCCTCTCTCCCTCTTTCTCTTTCTCCCTCCCTTTCTCCCTTTCTCTCTCTCTCTCTTTCTCTCT	<19.2>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:2,2:5:24,0,25	0/1:6,3:9:27,0,83	0/1:3,2:7:21,0,40
+chr21	31762836	chr21:31762836:M	TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,34:35:255,103,0	1/1:0,26:26:255,77,0
+chr21	31770101	chr21:31770101:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:9:189,42,24,99,0,74	2/2:2,1,9:12:124,105,153,2,18,0	1/1:0,9,0:10:255,30,0,183,29,158
+chr21	31771013	chr21:31771013:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:22:255,54,0	0/1:1,6:12:163,0,24	1/1:0,22:25:255,74,0
+chr21	31772337	chr21:31772337:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,109,0	1/1:0,15:15:255,44,0	1/1:0,33:33:255,97,0
+chr21	31774025	chr21:31774025:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:26:0,66,255	0/1:13,14:28:166,0,140	0/0:21,0:21:0,62,255
+chr21	31776758	chr21:31776758:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,9,2,4:15:255,110,75,197,39,155,245,0,127,223	2/3:0,1,7,10:18:255,255,255,168,150,116,128,82,0,78	1/1:0,23,0,0:25:255,74,0,255,73,255,255,74,255,255
+chr21	31779996	chr21:31779996:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,17:30:238,248,255,0,189,126	0/1:9,10,1:26:252,0,206,183,156,255	2/2:0,0,22:23:255,255,255,65,57,0
+chr21	31782896	chr21:31782896:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,10,10:25:250,135,225,131,0,226	2/2:1,0,22:23:255,255,255,50,66,0	1/1:0,21,0:24:255,70,0,255,71,255
+chr21	31785883	chr21:31785883:M	CCACTACCACCACCACCACCACCACCA	<45>	.	.	Motif=CCA	GT:AD:DP:PL	0/0:23,6:32:0,20,255	0/1:21,9:30:21,0,255	0/0:36,8:47:0,42,255
+chr21	31787642	chr21:31787642:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,2,11:27:138,174,255,0,169,185	0/1:6,11,1:19:152,0,63,185,72,255	2/2:2,0,20:22:255,255,255,28,60,0
+chr21	31787807	chr21:31787807:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:15:0,43,253	0/1:6,3:10:24,0,77	0/0:11,1:12:0,18,176
+chr21	31788117	chr21:31788117:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,8:17:255,121,97,132,0,90	1/2:1,5,6:15:218,69,71,94,0,76	1/2:1,3,11:16:206,137,162,26,0,9
+chr21	31788880	chr21:31788880:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,19:19:255,56,0	0/1:11,10:21:106,0,124	1/1:0,22:22:255,64,0
+chr21	31796630	chr21:31796630:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,18,11:29:255,255,255,255,0,255	2/2:0,0,10:13:255,255,255,31,31,0	1/1:0,36,0:36:255,106,0,255,108,255
+chr21	31799675	chr21:31799675:M	ACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<18.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,1,11,16:28:255,255,255,255,255,204,206,148,0,126	1/2:0,18,10,1:31:255,181,92,255,0,241,255,126,255,255	3/3:0,0,1,20:22:255,255,255,255,255,255,66,63,47,0
+chr21	31800059	chr21:31800059:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15>,<16>,<21>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,10,7:17:255,255,255,124,189,159,255,179,0,255	1/3:0,11,0,9:22:255,172,239,255,255,255,255,0,187,255	2/2:0,0,25,0:25:255,255,255,75,73,0,255,255,75,255
+chr21	31802596	chr21:31802596:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:20:89,0,133	0/1:7,6:14:62,0,89	0/1:4,9:13:120,0,32
+chr21	31803120	chr21:31803120:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2:8:11,0,81	0/0:8,1:10:0,10,116	1/1:0,9:11:163,29,0
+chr21	31804468	chr21:31804468:M	TCTCTCTCTCTCTCTCTCT	<8.5>,<10.5>,<11.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,9,11,0:21:184,130,196,102,0,144,197,119,183,255	2/3:1,0,11,7:20:227,255,255,74,88,34,90,131,0,86	1/1:0,20,2,0:23:217,39,0,248,17,255,255,30,255,255
+chr21	31806342	chr21:31806342:M	ACAACAACAACAACAACAACAACAACAACAACAACAACAACAA	<9.3>,<10.3>	.	.	Motif=ACA	GT:AD:DP:PL	0/2:13,0,16:30:255,255,255,0,255,255	0/1:10,14,1:25:255,0,224,232,250,255	2/2:0,0,40:40:255,255,255,120,118,0
+chr21	31814221	chr21:31814221:M	TTTATTTATTTATTTATTTATTTATTATTTA	<8.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:16,11:27:120,0,211	0/0:40,0:40:0,118,255
+chr21	31821753	chr21:31821753:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,1,7:19:73,108,255,0,153,157	0/1:13,13,0:30:184,0,140,255,190,255	2/2:3,1,25:29:255,255,255,21,50,0
+chr21	31825690	chr21:31825690:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/1:21,21:42:248,0,245	0/0:35,1:37:0,90,255
+chr21	31830774	chr21:31830774:M	AAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:15:121,0,148	0/0:15,0:18:0,50,255	1/1:0,18:20:255,59,0
+chr21	31835152	chr21:31835152:M	ATTAATTAATTAATTAATTAATTAA	<5.2>	.	.	Motif=ATTA	GT:AD:DP:PL	0/1:25,18:43:222,0,255	0/0:38,0:38:0,112,255	1/1:0,41:41:255,121,0
+chr21	31837540	chr21:31837540:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,11:31:120,0,249	0/1:19,17:38:204,0,219	1/1:1,33:36:255,87,0
+chr21	31841226	chr21:31841226:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7:19:212,0,124	0/0:9,0:10:0,27,253	1/1:0,16:22:255,60,0
+chr21	31843710	chr21:31843710:M	TCTCTCTCTCTCTCT	<67.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,7:24:12,0,255	0/0:16,5:21:0,3,255	0/1:15,18:33:117,0,255
+chr21	31843779	chr21:31843779:M	TCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTC	<11.8>,<12.8>,<33.8>	.	.	Motif=TCCT	GT:AD:DP:PL	2/3:0,0,10,7:18:210,213,227,66,77,46,162,176,0,233	1/3:0,6,0,5:11:198,56,38,154,55,138,145,0,99,134	2/3:0,0,7,18:27:255,255,255,199,199,173,143,143,0,157
+chr21	31843834	chr21:31843834:M	TTTCTTTTTCTTTTT	<22.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:18,7:25:2,0,255	0/0:18,5:23:0,14,255	0/1:16,18:34:96,0,255
+chr21	31849903	chr21:31849903:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,6:8:191,115,96,23,6,0	1/2:0,12,8:20:255,130,72,194,0,137	2/2:0,1,5:6:159,84,67,18,1,0
+chr21	31850852	chr21:31850852:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,2:20:0,23,255	0/1:10,13:26:164,0,105	0/0:18,1:20:0,41,255
+chr21	31853113	chr21:31853113:M	ATATATATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:7:89,20,0	0/0:0,0:2:0,4,15	1/1:0,2:2:26,6,0
+chr21	31853137	chr21:31853137:M	ACACACACACATACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,3:8:51,0,51	0/0:6,0:6:0,18,135	1/1:0,2:4:45,6,0
+chr21	31853265	chr21:31853265:M	ATAGATAGATAGATAGATAGATAGATAGATA	<6.8>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:0,19:19:255,56,0	1/1:0,14:14:255,41,0
+chr21	31853741	chr21:31853741:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,13:44:146,0,255	0/1:7,6:13:71,0,88	0/0:29,0:32:0,89,255
+chr21	31855075	chr21:31855075:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:33:255,59,0	1/1:2,30:34:255,64,0	1/1:2,34:37:255,72,0
+chr21	31856724	chr21:31856724:M	TCTCTCTCTCTCTCTCTCTCTCT	<9.5>,<13.5>,<15.5>	.	.	Motif=TC	GT:AD:DP:PL	1/3:0,9,2,4:25:255,164,135,255,39,255,255,0,255,255	1/3:0,3,0,4:12:224,164,157,147,76,147,72,0,82,70	2/3:0,0,20,5:29:255,255,255,107,108,24,255,255,0,255
+chr21	31857384	chr21:31857384:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,23:43:255,0,191	1/1:0,28:29:255,85,0	0/0:33,0:33:0,97,255
+chr21	31857549	chr21:31857549:M	TTTTTTGTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,42:42:255,123,0	1/1:0,38:38:255,112,0
+chr21	31857814	chr21:31857814:M	ATTTATTTATTTATTTATTTATTTATTTATTT	<7>,<11>,<13>	.	.	Motif=ATTT	GT:AD:DP:PL	2/3:0,0,9,7:17:255,255,255,195,195,166,250,250,0,227	1/2:0,19,9,0:28:255,249,193,255,0,255,255,246,255,255	3/3:0,0,0,9:9:255,255,255,255,255,255,27,27,27,0
+chr21	31858141	chr21:31858141:M	TTGTTGTTGTT	<2.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:26,19:45:214,0,255	0/0:31,0:31:0,92,255
+chr21	31858924	chr21:31858924:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:239,40,0	0/1:6,11:20:155,0,57	1/1:2,8:13:140,2,0
+chr21	31862350	chr21:31862350:M	TTTTTTTTTTTTTCTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:21:115,0,144	1/1:1,21:23:255,49,0	0/0:30,2:34:0,61,255
+chr21	31863345	chr21:31863345:M	TTTTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,8:17:99,146,255,0,153,107	0/1:9,12,1:23:255,0,205,255,138,255	0/0:16,0,0:17:0,51,255,50,255,255
+chr21	31864998	chr21:31864998:M	CCTTCCTTTCTTCCTTCCTTCC	<6.5>	.	.	Motif=CCTT	GT:AD:DP:PL	0/1:17,11:30:150,0,235	1/1:0,15:15:255,44,0	0/0:27,0:27:0,80,255
+chr21	31865216	chr21:31865216:M	TCTATCAATCATCTATTTATCTATCATCTAT	<6.8>,<33.8>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:16,6,0:22:44,0,219,109,255,255	1/2:0,12,5:17:221,50,15,203,0,255	0/0:27,0,0:27:0,79,255,81,255,255
+chr21	31865578	chr21:31865578:M	ATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATC	<15.2>,<33.8>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:9,0,0:9:0,27,169,27,191,248	2/2:0,0,5:5:62,62,62,14,14,0	0/1:7,4,0:14:83,0,88,119,127,255
+chr21	31867823	chr21:31867823:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<16>	.	.	Motif=GA	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/1:10,13:25:255,0,196	0/0:24,0:27:0,72,255
+chr21	31868681	chr21:31868681:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,9:21:104,0,159	1/1:1,21:23:255,50,0	0/0:22,1:24:0,52,255
+chr21	31869154	chr21:31869154:M	GTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,7:18:255,122,156,255,0,255	1/1:0,12,0:13:255,39,0,255,39,255	2/2:2,0,13:15:190,231,255,9,45,0
+chr21	31871339	chr21:31871339:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,11,1:13:255,203,179,26,17,0,255,185,8,255	1/2:0,6,5,0:11:255,85,53,102,0,70,255,85,102,255	0/3:3,0,0,6:10:76,104,245,101,235,231,0,60,52,34
+chr21	31878259	chr21:31878259:M	AAAAAAAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,4:11:48,71,208,0,69,60	1/2:0,11,4:17:255,63,65,255,0,255	0/0:10,1,2:13:0,10,255,2,144,138
+chr21	31886424	chr21:31886424:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:127,0,92	0/1:11,8:19:82,0,133	0/0:38,1:42:0,104,255
+chr21	31892149	chr21:31892149:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:22:119,9,0	0/1:4,2:6:4,0,24	0/1:9,7:21:28,0,65
+chr21	31892181	chr21:31892181:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<16>,<17>	.	.	Motif=AG	GT:AD:DP:PL	0/2:4,2,5:11:73,33,46,0,23,54	0/0:6,1,0:7:0,8,51,18,69,118	1/2:3,5,7:17:117,39,37,3,0,43
+chr21	31892210	chr21:31892210:M	GTGTGTGTGTGTGTGTGTGTGT	<13>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:7,4:12:53,0,121	0/0:16,0:16:0,48,255
+chr21	31900447	chr21:31900447:M	ACACACACACACACACACACACACACACACACA	<15.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:7,0,13:20:175,230,255,0,106,67	1/2:1,17,19:40:255,255,255,255,0,255	0/0:21,2,0:23:0,33,255,67,255,255
+chr21	31905077	chr21:31905077:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:0,32:34:255,99,0	1/1:0,25:28:255,81,0
+chr21	31915055	chr21:31915055:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:23:255,66,0	1/1:0,24:27:255,75,0	1/1:0,31:33:255,96,0
+chr21	31917696	chr21:31917696:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<29>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,2:2:52,6,0	1/1:0,3:4:80,8,0	1/1:0,2:2:56,6,0
+chr21	31924267	chr21:31924267:M	TGTGTGTGTGTGTGTGTGTTTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,1:35:0,84,255	0/0:45,1:46:0,117,255	0/1:17,21:40:255,0,197
+chr21	31925925	chr21:31925925:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:0,21:21:255,62,0	0/1:17,25:42:255,0,185
+chr21	31926952	chr21:31926952:M	TTCTTTCTTTCTTTCCTTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTTTTCTTTCTTATTTCTTTATTTCTTT	<13>,<20.5>	.	.	Motif=TTCT	GT:AD:DP:PL	1/2:1,3,1:7:95,26,43,46,0,63	1/2:1,1,3:6:79,45,65,12,0,28	0/2:2,0,3:7:77,70,118,0,37,39
+chr21	31931069	chr21:31931069:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:3:8,0,24	1/1:0,1:1:16,3,0	0/1:1,4:5:50,0,1
+chr21	31932912	chr21:31932912:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:12:0,0,132	0/0:12,0:12:0,35,201	0/1:9,3:12:16,0,119
+chr21	31933785	chr21:31933785:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:21:0,61,255	0/0:22,1:28:0,52,255	0/1:5,10:17:138,0,41
+chr21	31934443	chr21:31934443:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,121	0/0:2,0:2:0,6,33	0/1:1,3:5:45,0,3
+chr21	31939718	chr21:31939718:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0,1:25:0,72,255,56,255,255	0/2:15,0,6:22:39,85,255,0,251,193	0/1:11,9,2:22:198,0,254,124,158,253
+chr21	31952206	chr21:31952206:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41:43:255,108,0	1/1:0,38:40:255,117,0	0/1:14,33:49:255,0,116
+chr21	31955259	chr21:31955259:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:25:255,62,0	1/1:0,21:22:255,66,0	0/1:18,10:31:206,0,255
+chr21	31955427	chr21:31955427:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,26:30:255,86,0	0/1:9,11:24:238,0,192
+chr21	31960382	chr21:31960382:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,1:40:0,95,255	0/0:50,2:52:0,118,255	0/1:31,23:58:244,0,255
+chr21	31965589	chr21:31965589:M	TTTTTCTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3,0:12:18,0,125,52,134,207	0/1:6,4,0:10:38,0,72,67,84,185	0/2:5,1,5:12:61,75,183,0,56,62
+chr21	31968716	chr21:31968716:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:13,1,6:22:88,33,255,0,224,203	0/0:16,0,0:19:0,56,255,50,255,255	1/2:0,6,14:24:255,150,85,107,0,39
+chr21	31968754	chr21:31968754:M	GAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:14,14:29:255,0,255	0/0:23,0:25:0,63,255	1/1:0,25:32:255,94,0
+chr21	31968804	chr21:31968804:M	GTGTTGTGTCTGTGTGTGTGTATGTGTTGTGTGTAAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<32>,<35>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,6:12:247,109,135,154,0,136	2/2:0,0,11:11:193,222,255,32,33,0	1/1:0,17,0:17:255,51,0,255,51,255
+chr21	31971070	chr21:31971070:M	TTTATTTATTTATTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,32:37:118,45,0	1/1:0,28:30:107,42,0	1/1:0,24:29:90,35,0
+chr21	31971831	chr21:31971831:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:18:56,0,160	0/0:14,1:19:0,37,255	1/1:0,9:13:181,26,0
+chr21	31973562	chr21:31973562:M	GATGATGGTGATGGTGGTGGTGATGATGATGATGATGATGATGATGATG	<17.3>	.	.	Motif=GAT	GT:AD:DP:PL	0/1:15,9:24:101,0,216	0/0:20,0:20:0,59,255	1/1:0,22:22:255,65,0
+chr21	31974997	chr21:31974997:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,2:22:0,27,255	0/0:34,2:36:0,70,255	0/1:19,7:27:57,0,255
+chr21	31979109	chr21:31979109:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:26:222,0,255	0/0:26,0:30:0,89,255	1/1:0,16:19:255,47,0
+chr21	31979516	chr21:31979516:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:12,3,0	0/0:0,0:1:0,3,14	1/1:0,4:4:117,12,0
+chr21	31989714	chr21:31989714:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:11:83,0,120	0/0:12,0:12:0,36,255	1/1:0,8:11:233,27,0
+chr21	31995159	chr21:31995159:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:6,0,11	1/1:0,0:4:24,6,0	1/1:0,3:3:49,9,0
+chr21	32001654	chr21:32001654:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,10:30:104,0,255	0/0:36,0:36:0,106,255	1/1:0,45:45:255,133,0
+chr21	32005669	chr21:32005669:M	AAAAAAAACAAAAAAACAAAAACAAAAAAAAA	<26>,<38>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,14:31:255,255,255,255,0,255	1/2:0,14,11:25:255,255,236,255,0,255	2/2:0,0,16:16:255,255,255,48,48,0
+chr21	32007938	chr21:32007938:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:57,6,0	1/1:0,0:3:3,1,0	1/1:0,7:8:199,21,0
+chr21	32008238	chr21:32008238:M	AAAACAAAACAAAACAAAACAAA	<2.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,50:50:255,150,0	1/1:0,32:32:255,96,0	1/1:0,35:35:255,105,0
+chr21	32013127	chr21:32013127:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:39:255,96,0	0/1:21,18:42:216,0,255	1/1:1,27:30:255,70,0
+chr21	32020058	chr21:32020058:M	CAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATA	<15>,<16>,<17>	.	.	Motif=CAATA	GT:AD:DP:PL	1/2:0,3,3,0:6:126,54,38,47,0,38,109,47,55,126	0/1:3,6,0,0:9:78,0,26,87,52,165,103,52,182,236	2/3:0,0,3,3:6:158,131,122,53,53,36,53,45,0,36
+chr21	32029559	chr21:32029559:M	ACACACACACACACACACACACACACACACA	<13.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,15:27:195,231,255,0,217,142	1/2:0,7,14:21:255,203,182,120,0,60	0/0:20,1,0:21:0,33,255,50,255,255
+chr21	32034249	chr21:32034249:M	TTTTTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10,0:18:251,0,182,255,147,255	1/2:0,11,9:20:255,157,206,255,0,255	0/0:18,0,0:18:0,54,255,53,255,255
+chr21	32044874	chr21:32044874:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,1,3:7:31,34,100,0,26,43	1/2:1,4,1:8:69,2,7,71,0,118	0/2:1,0,2:4:34,43,76,0,14,5
+chr21	32046185	chr21:32046185:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,28:43:255,0,159	0/1:24,18:42:201,0,255	0/0:30,0:30:0,89,255
+chr21	32046565	chr21:32046565:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:25:147,0,255	0/1:13,12:26:244,0,255	0/0:38,0:41:0,117,255
+chr21	32048116	chr21:32048116:M	ACACACAGACACACACACACACACACACACAGACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,16:32:212,0,185	0/1:17,15:33:167,0,212	0/0:31,1:32:0,76,255
+chr21	32049955	chr21:32049955:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:18:76,0,150	0/0:26,1:27:0,62,255	0/1:20,19:40:225,0,252
+chr21	32053344	chr21:32053344:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18,5:45:255,0,255,246,255,255	0/2:14,2,8:25:85,84,255,0,216,183	2/2:1,3,21:25:255,255,255,55,19,0
+chr21	32069592	chr21:32069592:M	TATCTATCTCTATCTACCTACCTACCTATCAATCTAT	<11.2>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:17,20:47:255,0,255	0/0:22,0:30:0,66,255	0/1:12,15:33:255,0,217
+chr21	32077210	chr21:32077210:M	ACACACACCACAACACACACACATACACACACACACACACACACACACACACACACACACACACAC	<36>	.	.	Motif=AC	GT:AD:DP:PL	.	1/1:0,4:4:104,12,0	1/1:0,3:3:79,9,0
+chr21	32078377	chr21:32078377:M	TATTTATTTATTTATTTATTTATTTAT	<9.8>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,10:26:204,0,255	0/0:34,0:35:0,94,255	0/1:14,13:27:255,0,255
+chr21	32080091	chr21:32080091:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:31:95,0,255	0/0:31,1:37:0,87,255	0/1:20,9:31:73,0,255
+chr21	32080732	chr21:32080732:M	TCTCTCTCTCTTTCCTTCTTTCTCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTCTCTCTCTCTCTCTCT	<4.5>,<32>,<37>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,1,3,2:7:94,75,94,25,23,37,74,50,0,68	1/3:0,3,0,3:7:98,38,65,107,74,142,68,0,69,59	2/3:0,2,6,5:17:202,171,224,73,85,114,144,99,0,126
+chr21	32086693	chr21:32086693:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:13:21,0,120	0/0:9,0:11:0,32,172	0/1:11,4:16:22,0,154
+chr21	32092087	chr21:32092087:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:17,0,122	0/1:5,2:8:13,0,63	0/0:11,1:13:0,21,181
+chr21	32096335	chr21:32096335:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,12,98	0/1:10,4:16:49,0,207	0/1:7,6:15:104,0,131
+chr21	32098421	chr21:32098421:M	CTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7.8>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:4,2:6:36,0,98	1/1:0,3:4:97,12,0	0/0:3,0:4:0,11,97
+chr21	32108422	chr21:32108422:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:13:96,0,51	1/1:1,7:11:126,13,0	0/1:1,2:4:23,0,18
+chr21	32109144	chr21:32109144:M	AACAAAAACAAAAAAAAAAC	<3.7>	.	.	Motif=AACAAA	GT:AD:DP:PL	0/1:15,16:32:255,0,255	1/1:0,35:38:255,107,0	0/1:27,19:46:255,0,255
+chr21	32110501	chr21:32110501:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,20,12:33:255,185,121,255,0,255	1/2:0,12,19:32:255,255,237,206,0,118	1/1:0,46,1:50:255,144,0,255,126,255
+chr21	32115837	chr21:32115837:M	TATATATATATCATATATATAATATACATTATATTATTATATATAATAATATAT	<29>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,6:11:105,0,83	0/1:1,1:2:17,0,17	0/0:11,0:11:0,33,254
+chr21	32119419	chr21:32119419:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:27:255,75,0	1/1:1,22:24:255,50,0	1/1:1,27:30:255,69,0
+chr21	32120646	chr21:32120646:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,14:27:179,0,117	0/1:9,11:21:136,0,91	1/1:0,31:34:255,99,0
+chr21	32121018	chr21:32121018:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:10:43,0,60	0/0:10,1:11:0,15,152	0/1:6,8:16:92,0,76
+chr21	32125166	chr21:32125166:M	TTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:22:255,29,0	0/1:3,16:21:255,0,39	1/1:0,22:25:255,73,0
+chr21	32126948	chr21:32126948:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:113,29,17,61,0,47	0/1:3,4,0:8:95,0,60,73,49,103	1/2:1,2,4:7:86,41,58,17,0,14
+chr21	32130074	chr21:32130074:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:14:255,33,0	1/1:1,9:12:233,5,0	1/1:0,17:18:255,51,0
+chr21	32133461	chr21:32133461:M	AAACAAACAAACAAACAAACAAACAAACAGACAAACA	<10.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:11,11:22:147,0,148	0/1:12,6:18:56,0,165	0/0:32,0:32:0,95,255
+chr21	32144785	chr21:32144785:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,2:23:0,9,255	0/1:11,12:28:242,0,251	1/1:0,15:19:255,50,0
+chr21	32147949	chr21:32147949:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:41,0,41	0/1:3,2:7:48,0,61	1/1:0,5:7:133,14,0
+chr21	32157028	chr21:32157028:M	TTTCCTTTCTTTTCCTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<8.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:2,8:10:122,0,9	1/1:0,7:8:139,23,0	0/1:6,2:8:14,0,90
+chr21	32158472	chr21:32158472:M	TTTTTTTTTTTTTTCTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,29:48:255,0,200	0/1:15,10:25:102,0,189	1/1:0,34:34:255,100,0
+chr21	32160286	chr21:32160286:M	ACACACACACACACACACACACACACACACACACACACACACACACATACAC	<19>,<20>	.	.	Motif=AC	GT:AD:DP:PL	0/2:9,0,13:22:255,229,255,0,237,199	0/2:6,0,10:16:246,168,255,0,154,124	1/2:0,12,17:30:255,255,210,217,0,133
+chr21	32160650	chr21:32160650:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,14:24:189,0,115	0/1:11,15:26:187,0,117	0/1:16,12:29:141,0,205
+chr21	32161471	chr21:32161471:M	TTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTGTTT	<10>,<11>	.	.	Motif=TTGT	GT:AD:DP:PL	0/2:10,0,14:24:255,255,255,0,190,216	0/1:8,13,0:21:175,0,84,199,144,255	0/2:20,0,13:33:255,239,255,0,255,255
+chr21	32165433	chr21:32165433:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:41:0,116,255	0/1:24,8:34:43,0,255	0/1:14,11:30:121,0,203
+chr21	32175809	chr21:32175809:M	CAAAAAAAACAAAAACAAAAACAAAACAA	<6>	.	.	Motif=CAAAA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:30,0:30:0,90,255	0/1:11,19:30:255,0,166
+chr21	32177898	chr21:32177898:M	CTTTTTTTTTCTTTTGTTTTCTTTTCTTTTTTTT	<5.8>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:27,0:27:0,79,255	1/1:0,11:11:205,32,0
+chr21	32179440	chr21:32179440:M	CACACACACACACA	<6>	.	.	Motif=CA	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/0:37,0:37:0,109,255	0/1:24,22:46:255,0,255
+chr21	32188004	chr21:32188004:M	TCTCTCTCTCTCTCTCTGTCCCTTTCTCTCTCTCTC	<22>	.	.	Motif=TC	GT:AD:DP:PL	0/0:29,0:31:0,89,255	0/0:25,0:28:0,80,255	0/1:14,6:21:98,0,255
+chr21	32193467	chr21:32193467:M	GATAGATAGATAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATAGAT	<14.8>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:8,11:20:120,0,72	1/1:0,10:10:153,29,0	0/0:14,0:22:0,48,239
+chr21	32196460	chr21:32196460:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:3:0,9,54	0/1:6,3:9:25,0,76	0/0:8,1:9:0,9,122
+chr21	32200430	chr21:32200430:M	TTTTTCTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,1:17:0,32,255	0/0:21,1:23:0,50,255	0/1:9,6:16:62,0,115
+chr21	32209156	chr21:32209156:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:43:0,126,255	0/0:40,0:42:0,123,255	0/1:21,21:44:255,0,255
+chr21	32236211	chr21:32236211:M	AAAAAAAAAAAAATACAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/0:19,0:19:0,56,255	0/1:8,14:23:197,0,79
+chr21	32240770	chr21:32240770:M	TGGTTTTGGTTTT	<2.3>	.	.	Motif=TGGTTT	GT:AD:DP:PL	1/1:1,32:34:255,81,0	1/1:0,29:29:255,80,0	1/1:0,44:44:255,122,0
+chr21	32258835	chr21:32258835:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<9>,<10>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:12,8,0:20:133,0,236,103,157,210	0/2:9,0,9:19:69,86,255,0,108,67	0/1:8,8,0:16:145,0,148,102,103,165
+chr21	32268930	chr21:32268930:M	TTTTTTTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,4:35:0,29,255	0/0:17,0:17:0,50,255	0/1:11,11:22:134,0,134
+chr21	32270263	chr21:32270263:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/0:31,0:32:0,94,255	0/1:16,19:37:240,0,191
+chr21	32280506	chr21:32280506:M	TTTTTTTTTTCTTTTCTTTATTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:23,0:23:0,68,255	0/1:14,18:33:242,0,181
+chr21	32287244	chr21:32287244:M	CACACACACACACACACACACACACACACACACAC	<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,17:31:182,0,134	1/1:4,29:34:255,36,0	0/0:39,0:41:0,118,255
+chr21	32295976	chr21:32295976:M	AAAAAACAAAACAAAACAAAACAAAAAACAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:21,29:50:255,0,255	0/0:23,0:23:0,69,255
+chr21	32301030	chr21:32301030:M	ATATCAAATATATCATATGATATATATCATATCATATATCCATATATATCATGATATATCGTATATGATATCATAT	<12>	.	.	Motif=ATATC	GT:AD:DP:PL	0/0:10,1:13:0,5,244	0/1:12,4:16:61,0,255	0/1:9,3:15:48,0,207
+chr21	32302980	chr21:32302980:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,3,2:15:44,8,99,0,83,173	0/0:15,0,0:16:0,46,254,48,255,255	1/2:0,3,4:10:164,90,69,42,0,21
+chr21	32304613	chr21:32304613:M	CAAACAAAAAAAAACAAACAAAAAACAAAACAAAACAAACAAACAAACAAAACAAAC	<13.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:11,6:27:35,0,77	0/0:18,0:31:0,34,186	1/1:0,27:38:255,83,0
+chr21	32304954	chr21:32304954:M	TTTTTTTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:8:67,0,12	0/0:1,0:1:0,3,17	1/1:0,11:11:192,32,0
+chr21	32315315	chr21:32315315:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:34:123,0,223	0/1:11,4:18:15,0,162	0/1:6,18:25:244,0,30
+chr21	32329107	chr21:32329107:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:34:255,78,0	1/1:1,22:24:255,52,0	1/1:2,27:29:255,49,0
+chr21	32330198	chr21:32330198:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:5:87,0,16,88,17,101	1/1:0,5,0:9:198,24,0,184,22,177	0/2:2,0,4:7:50,56,147,0,23,16
+chr21	32332478	chr21:32332478:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,10:14:255,33,0	1/1:0,11:14:255,33,0
+chr21	32332508	chr21:32332508:M	AAAAAAACAAAAGACAAAAAAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,2:10:0,0,56	0/1:2,4:7:29,0,16	0/0:7,1:11:0,16,93
+chr21	32332555	chr21:32332555:M	AAAAAAACAAAAGACAAAAAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5,1:7:67,8,0,48,5,58	2/2:0,0,3:3:76,47,39,9,8,0	1/1:0,3,1:5:40,1,0,19,1,39
+chr21	32333103	chr21:32333103:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:248,0,255	1/1:1,36:37:255,91,0	0/0:53,1:54:0,141,255
+chr21	32342038	chr21:32342038:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,35:35:255,102,0	1/1:0,40:40:255,116,0
+chr21	32357315	chr21:32357315:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:19:0,28,255	0/1:17,6:24:33,0,217	0/0:14,2:17:0,15,215
+chr21	32369976	chr21:32369976:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:22,0,22	0/0:6,0:6:0,17,98	1/1:1,7:8:100,6,0
+chr21	32376807	chr21:32376807:M	TTTGTTTTGTTTGTTTGTTTGTTTGTTTGTTT	<9>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:12,14:26:192,0,154	0/0:32,0:33:0,97,255	1/1:0,35:35:255,103,0
+chr21	32381427	chr21:32381427:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:35:237,0,185	1/1:2,32:36:255,70,0	0/0:24,3:27:0,26,255
+chr21	32384987	chr21:32384987:M	GAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	<11.8>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:12,10:22:128,0,167	1/1:0,14:14:253,41,0	0/0:22,0:22:0,65,255
+chr21	32387601	chr21:32387601:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:95,6,0	1/1:1,9:13:152,17,0	1/1:0,9:9:153,26,0
+chr21	32391370	chr21:32391370:M	AAAAAAAAAAGAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,16:40:193,0,255	1/1:0,29:31:255,90,0	0/0:35,0:37:0,108,255
+chr21	32391857	chr21:32391857:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,10:17:132,0,77	0/1:4,19:25:255,0,6	0/0:30,1:31:0,74,255
+chr21	32397699	chr21:32397699:M	AAAAAAAAAAAAAAAAAAAAGAGAAAAGAAAAAAGAAAAAAAAA	<45>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:5:37,0,20	1/1:0,2:3:34,7,0	0/0:7,0:9:0,26,139
+chr21	32403009	chr21:32403009:M	AAAAAAAAAAGAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,19:35:255,0,199	1/1:1,43:44:255,112,0	0/0:39,0:40:0,118,255
+chr21	32404234	chr21:32404234:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,6:20:98,0,255	1/1:0,13:15:255,42,0	0/0:14,0:18:0,47,255
+chr21	32404797	chr21:32404797:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:3:29,0,19	1/1:0,9:10:255,30,0	0/0:1,0:1:0,3,26
+chr21	32406053	chr21:32406053:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:124,0,11	1/1:0,11:13:255,39,0	0/0:0,0:1:0,1,2
+chr21	32416305	chr21:32416305:M	TTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,3:18:0,0,216	0/1:7,6:13:64,0,81	0/0:12,2:17:0,12,194
+chr21	32422045	chr21:32422045:M	AAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,3:10:56,76,165,0,102,140	2/2:0,0,2:5:93,94,96,14,14,0	0/1:7,6,0:14:75,0,80,113,120,255
+chr21	32423071	chr21:32423071:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,6:9:202,24,0	.
+chr21	32425151	chr21:32425151:M	AAACAAACAAACAAACAAACAA	<7.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:17,9:30:167,0,255	1/1:0,32:34:255,98,0	0/0:38,0:38:0,114,255
+chr21	32425963	chr21:32425963:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,20:41:255,0,250	1/1:0,34:34:255,100,0	0/0:40,0:42:0,123,255
+chr21	32427856	chr21:32427856:M	AAAAAAAAAAAAAAAAAAAAAA	<19>,<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4,0,0:5:138,15,0,96,15,84,135,15,96,133	1/2:0,7,4,0:12:255,68,33,129,0,96,255,57,128,249	3/3:1,1,0,12:14:194,202,255,186,228,209,21,12,29,0
+chr21	32434594	chr21:32434594:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<6.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,9:19:198,0,223	1/1:0,10:11:255,30,0	0/0:13,0:13:0,39,255
+chr21	32438487	chr21:32438487:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:16,0,51	1/1:0,4:4:65,12,0	0/1:2,3:5:35,0,19
+chr21	32442664	chr21:32442664:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:23:105,0,148	0/1:4,7:11:87,0,36	0/1:13,4:18:17,0,185
+chr21	32444054	chr21:32444054:M	ACACACACACACACACACACACACACACACACACACACA	<16.5>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,9,14:24:255,255,255,242,0,190	2/2:0,0,30:32:255,255,255,96,87,0	0/1:8,14,0:23:255,0,180,255,203,255
+chr21	32447533	chr21:32447533:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:255,0,199	1/1:1,32:35:255,84,0	0/0:34,0:36:0,105,255
+chr21	32450384	chr21:32450384:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,19:30:255,0,106	1/1:2,26:28:255,47,0	0/0:32,0:36:0,104,255
+chr21	32463727	chr21:32463727:M	AAACAAAACAAAACAAAAAAAA	<4.2>	.	.	Motif=AAACA	GT:AD:DP:PL	0/1:25,17:42:255,0,255	1/1:0,44:44:255,131,0	0/0:44,1:45:0,112,255
+chr21	32463782	chr21:32463782:M	AAAAAAAGAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,20:39:255,0,247	1/1:0,45:45:255,132,0	0/0:51,0:51:0,150,255
+chr21	32466825	chr21:32466825:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,21:34:255,0,132	1/1:2,27:30:255,52,0	0/0:31,3:34:0,46,255
+chr21	32467906	chr21:32467906:M	ATATATATATATATATCCTATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,15:41:112,0,227	1/1:0,16:17:228,46,0	0/0:31,0:32:0,89,255
+chr21	32470735	chr21:32470735:M	TCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTT	<8.5>	.	.	Motif=TCTT	GT:AD:DP:PL	0/0:16,6:32:0,7,29	1/1:0,13:26:44,17,0	0/0:20,0:27:0,29,71
+chr21	32471317	chr21:32471317:M	TTTTTTTCTTTTTTCTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,30,255	1/1:0,10:12:255,33,0	0/0:18,0:19:0,57,255
+chr21	32472155	chr21:32472155:M	ATTTATTTATTTATTTATTT	<3>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:1,3:5:61,0,12	0/0:41,0:41:0,123,255
+chr21	32472638	chr21:32472638:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:41:255,0,214	1/1:0,47:47:255,138,0	0/0:27,1:28:0,65,255
+chr21	32475341	chr21:32475341:M	ATCATCATCATCATCATCATCATCATCAT	<10.7>	.	.	Motif=ATC	GT:AD:DP:PL	0/1:16,19:35:255,0,206	1/1:2,30:32:255,58,0	0/0:29,1:31:0,72,255
+chr21	32475880	chr21:32475880:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<13.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,9:9:172,27,0	.	0/1:14,13:27:162,0,181
+chr21	32479848	chr21:32479848:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:196,0,205	1/1:0,30:31:255,91,0	0/0:45,1:47:0,120,255
+chr21	32480303	chr21:32480303:M	AAAAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:19:0,56,255	1/1:0,3:3:82,9,0	0/0:34,0:38:0,113,255
+chr21	32480962	chr21:32480962:M	AAAAAAAAAAAAATAAATAAAAATAAAATAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:165,0,184	1/1:0,23:23:255,68,0	0/0:16,2:18:0,16,255
+chr21	32481510	chr21:32481510:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:35:255,0,170	1/1:2,31:35:255,67,0	0/0:32,4:36:0,32,255
+chr21	32482855	chr21:32482855:M	TTTTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:12:0,35,255	0/0:6,0:7:0,19,175	0/1:3,27:32:255,0,11
+chr21	32483963	chr21:32483963:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,8:24:255,108,191,255,0,255	1/1:0,31,0:31:255,93,0,255,93,255	0/2:12,1,8:21:84,114,255,0,184,155
+chr21	32488588	chr21:32488588:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:40:246,0,255	1/1:1,28:30:255,68,0	0/0:30,1:34:0,81,255
+chr21	32492700	chr21:32492700:M	TTTTCTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,24:40:255,0,185	1/1:2,32:35:255,66,0	0/0:36,2:39:0,78,255
+chr21	32493771	chr21:32493771:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<9.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,10,10:20:255,166,136,191,0,135	1/1:0,19,0:19:255,57,0,255,56,255	0/2:12,0,7:19:76,112,255,0,223,171
+chr21	32494782	chr21:32494782:M	AAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:32:231,0,255	1/1:0,11:13:255,38,0	0/0:30,0:33:0,98,255
+chr21	32498440	chr21:32498440:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:16:41,0,121	1/1:1,9:12:152,17,0	0/0:18,0:18:0,53,255
+chr21	32500191	chr21:32500191:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:107,12,0	1/1:0,7:8:218,24,0	0/0:2,0:2:0,6,72
+chr21	32500818	chr21:32500818:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10:26:110,0,222	1/1:1,28:30:255,70,0	0/0:41,0:41:0,121,255
+chr21	32513167	chr21:32513167:M	TTATTTTATTTTATTTATTTATTTT	<4.8>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:10,6:16:81,0,168	0/0:24,0:24:0,72,255
+chr21	32513541	chr21:32513541:M	TTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:7:0,21,188	0/1:3,4:8:79,0,59	0/0:11,0:11:0,33,255
+chr21	32516184	chr21:32516184:M	TTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:21:0,63,255	0/1:5,11:22:255,0,126	0/0:13,0:17:0,51,255
+chr21	32519455	chr21:32519455:M	ACACACACAAACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<30>	.	.	Motif=AC	GT:AD:DP:PL	0/2:4,0,3:7:31,51,184,0,68,48	0/1:2,5,0:9:129,0,44,137,42,173	0/2:7,0,2:9:7,34,236,0,117,92
+chr21	32523066	chr21:32523066:M	TAAAAATAAAAA	<2.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/0:53,0:54:0,160,255	0/1:17,17:34:255,0,255	0/0:40,0:40:0,120,255
+chr21	32531819	chr21:32531819:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	<1.8>,<4.8>	.	.	Motif=AGGG	GT:AD:DP:PL	1/2:0,0,1:3:59,26,19,19,0,11	1/2:0,3,7:12:255,191,168,84,0,55	1/2:0,0,1:5:58,42,38,9,0,0
+chr21	32540787	chr21:32540787:M	AAAAAAAAAACAAACAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:10,16:26:191,0,91	0/0:26,1:28:0,65,255
+chr21	32545033	chr21:32545033:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:12:0,6,154	0/1:6,7:14:92,0,64	0/0:16,2:20:0,8,251
+chr21	32553744	chr21:32553744:M	AAAAAAAAAAAGAAAAGAAAAAAAGAAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:0,20:21:255,61,0	1/1:0,25:25:255,74,0
+chr21	32560849	chr21:32560849:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:52,0:52:0,154,255	0/1:26,28:55:255,0,255	0/0:49,1:52:0,134,255
+chr21	32567198	chr21:32567198:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<8.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:16,0:17:0,51,255	0/1:6,8:14:181,0,127	0/0:20,0:20:0,60,255
+chr21	32572220	chr21:32572220:M	GTTTTTTTTGTTTTGTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTT	<10.6>	.	.	Motif=GTTTT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:10,18:28:255,0,160	0/0:15,0:15:0,45,255
+chr21	32572428	chr21:32572428:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:39:0,112,255	0/1:17,11:29:216,0,255	0/0:33,0:33:0,99,255
+chr21	32580477	chr21:32580477:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,3:14:47,0,244	0/1:3,3:10:61,0,76	0/0:12,0:18:0,45,255
+chr21	32582567	chr21:32582567:M	TTTCTTTCTTCTTTCTTTCCTTTCTTTCTTTCTTTTCTTTTCTTTTTTC	<13.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:10,11:21:137,0,119	0/0:24,0:24:0,71,255
+chr21	32586207	chr21:32586207:M	GTGTGTGTGTGTGTCCTGAGGTGTGCGAGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:28:0,72,255	0/1:12,6:20:38,0,126	0/0:16,0:20:0,46,242
+chr21	32590335	chr21:32590335:M	GAGAAAGAGAAAGAAAAAGAAAGAAAGAGGAAAGAAAGAGAGAGAGAGAAAGA	<8.2>	.	.	Motif=GAGAAA	GT:AD:DP:PL	0/0:23,0:24:0,69,255	0/1:10,6:16:114,0,223	0/0:20,0:24:0,60,255
+chr21	32598546	chr21:32598546:M	TTTTTTTTTTCTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,2:16:3,0,255	0/1:4,6:10:123,0,79	0/0:9,1:10:0,4,214
+chr21	32608225	chr21:32608225:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:8:54,0,24	0/1:3,2:7:21,0,36	0/1:5,2:9:18,0,54
+chr21	32614237	chr21:32614237:M	TTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:6:0,17,140	0/1:3,11:15:255,0,57	0/0:5,0:6:0,18,160
+chr21	32625344	chr21:32625344:M	ATTTTTTTATTTTATTTATTTATTTATT	<6.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:15,24:39:255,0,237	0/0:28,0:28:0,84,255
+chr21	32627525	chr21:32627525:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:26,0,9	0/1:1,4:5:52,0,2	0/0:4,0:6:0,15,80
+chr21	32637394	chr21:32637394:M	TTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,90	1/1:0,7:9:98,4,0	0/0:6,1:8:0,5,97
+chr21	32667112	chr21:32667112:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:53,0:54:0,159,255	0/1:23,22:47:250,0,255	0/0:52,0:53:0,156,255
+chr21	32668010	chr21:32668010:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:7,0,21:30:255,255,255,0,117,29	1/2:1,14,10:29:255,151,238,255,0,255	1/2:0,23,9:32:255,145,171,255,0,255
+chr21	32674624	chr21:32674624:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,29:30:255,255,255,88,70,0	1/2:0,20,11:33:255,163,98,255,0,255	2/2:2,1,30:33:255,255,255,60,78,0
+chr21	32697499	chr21:32697499:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:18,17:38:206,0,215	0/0:18,3:23:0,12,255
+chr21	32722190	chr21:32722190:M	AAAAAAAAAAAAAAAAA	<11>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,1:7:1,21,177,0,124,108	1/2:0,5,3:8:189,63,64,133,0,124	0/0:6,0,0:7:0,21,186,21,158,145
+chr21	32744261	chr21:32744261:M	AAAAAAAAAAAAAAAAGAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,7:11:149,0,23	0/1:6,7:18:130,0,129	0/1:7,8:22:163,0,125
+chr21	32755128	chr21:32755128:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,27:31:255,19,0	1/1:1,28:33:255,78,0	1/1:1,42:45:255,114,0
+chr21	32758645	chr21:32758645:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,2:15:0,8,180	0/1:5,5:12:73,0,50	0/1:6,1:11:3,0,95
+chr21	32760888	chr21:32760888:M	TGTGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:20:255,56,0	0/1:8,12:20:147,0,78	1/1:0,16:16:255,47,0
+chr21	32763995	chr21:32763995:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:15:1,0,149	0/1:10,11:22:127,0,100	0/0:16,1:19:0,28,253
+chr21	32775615	chr21:32775615:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:24:255,16,0	1/1:2,17:19:255,21,0	1/1:0,9:11:182,32,0
+chr21	32777563	chr21:32777563:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:20:30,0,209	0/0:17,1:20:0,41,255	0/1:15,4:20:12,0,212
+chr21	32780407	chr21:32780407:M	AAAAAGAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:27:255,78,0	0/1:3,21:26:255,0,2	1/1:0,26:30:255,83,0
+chr21	32784925	chr21:32784925:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,40:40:255,118,0	1/1:1,39:40:255,100,0
+chr21	32792904	chr21:32792904:M	TTATTATTATTATT	<5>,<6.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:1,6,37:47:255,255,255,14,0,5	1/2:0,10,30:40:255,255,255,38,0,55	1/2:0,10,33:43:255,255,255,38,0,47
+chr21	32792916	chr21:32792916:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,38:43:255,84,0	1/1:0,29:31:255,78,0	1/1:0,30:35:255,80,0
+chr21	32800804	chr21:32800804:M	AAAAAAACAAAAAAAAAACCAAAAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,13:13:255,39,0	1/1:0,28:28:255,84,0
+chr21	32804276	chr21:32804276:M	TATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,19:19:255,56,0	1/1:1,34:35:255,85,0
+chr21	32805361	chr21:32805361:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,28:30:255,89,0	1/1:1,28:29:255,60,0
+chr21	32807335	chr21:32807335:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:152,18,0	1/1:0,10:11:255,33,0	1/1:0,5:7:167,20,0
+chr21	32809183	chr21:32809183:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:2,7,1,6:16:239,141,149,173,87,255,87,0,196,198	1/2:0,6,3,0:11:179,84,61,102,0,149,161,52,166,222	3/3:0,0,0,7:7:223,223,222,141,141,121,21,21,21,0
+chr21	32809266	chr21:32809266:M	TCCCTCCCTCC	<3.8>	.	.	Motif=TCCC	GT:AD:DP:PL	1/1:0,25:25:255,70,0	1/1:0,14:16:187,42,0	1/1:0,22:22:255,61,0
+chr21	32810247	chr21:32810247:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:100,12,0	1/1:0,2:2:58,6,0	1/1:0,2:2:58,6,0
+chr21	32810422	chr21:32810422:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:12:47,0,73	0/1:7,2:9:7,0,91	0/0:8,0:8:0,23,138
+chr21	32820387	chr21:32820387:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,4:25:19,0,255	0/0:18,2:21:0,3,255	0/1:15,6:23:80,0,255
+chr21	32823072	chr21:32823072:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:11,8:20:177,0,249	1/1:0,7:7:193,21,0	0/0:29,0:29:0,87,255
+chr21	32826211	chr21:32826211:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,2:3:66,9,0	.
+chr21	32847782	chr21:32847782:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,19:42:244,0,255	1/1:0,37:39:255,114,0	0/0:45,0:45:0,133,255
+chr21	32861553	chr21:32861553:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:10:34,0,76	0/0:12,1:14:0,14,174	0/0:10,1:11:0,15,155
+chr21	32869647	chr21:32869647:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCTATCT	<13.8>,<16.8>	.	.	Motif=TCTA	GT:AD:DP:PL	0/2:14,0,10:24:255,255,255,0,255,255	1/2:0,7,13:20:255,255,255,128,0,206	0/0:24,0,0:24:0,71,255,72,255,255
+chr21	32887709	chr21:32887709:M	ACACACACACACACACACACACACACACACACACACACAC	<18>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,13:33:255,199,139,255,0,255	1/2:0,16,13:31:255,187,133,255,0,210	2/2:0,2,21:23:255,255,255,67,32,0
+chr21	32888296	chr21:32888296:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,20:42:255,0,255	1/1:0,54:54:255,159,0	0/0:47,0:47:0,139,255
+chr21	32890901	chr21:32890901:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,20:45:247,0,255	1/1:0,26:26:255,76,0	0/0:35,0:35:0,103,255
+chr21	32891062	chr21:32891062:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:34,0,124	0/0:13,1:14:0,24,207	0/1:8,5:13:50,0,104
+chr21	32901909	chr21:32901909:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:31:255,81,0	1/1:2,36:41:255,84,0	0/1:19,25:49:255,0,220
+chr21	32914140	chr21:32914140:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:19,27:48:255,0,196	0/1:26,16:42:168,0,255
+chr21	32918456	chr21:32918456:M	GGGGGGGGGGTGGGGGG	<19>,<20>	.	.	Motif=G	GT:AD:DP:PL	1/2:0,5,3:14:191,41,17,65,0,49	1/1:0,6,0:22:149,20,0,96,21,120	1/2:0,1,7:18:220,94,69,15,0,21
+chr21	32927053	chr21:32927053:M	GTGTGTGTGTGTGTGTATGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,49:49:255,144,0	0/1:18,16:34:201,0,237
+chr21	32930199	chr21:32930199:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:8:183,23,0	1/1:0,6:6:207,18,0	1/1:0,6:7:211,21,0
+chr21	32932474	chr21:32932474:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,4:41:0,47,255	0/1:17,17:35:205,0,195	0/0:33,4:38:0,39,255
+chr21	32933983	chr21:32933983:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:2:59,6,0	1/1:0,6:7:176,18,0	.
+chr21	32936125	chr21:32936125:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:15:0,43,231	0/1:11,4:15:17,0,121	0/0:13,1:15:0,25,182
+chr21	32936328	chr21:32936328:M	TATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:28,0:30:0,89,255	0/1:17,11:30:214,0,255	0/0:41,0:41:0,123,255
+chr21	32943260	chr21:32943260:M	TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<6.8>,<9.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	2/2:1,0,11:14:195,228,255,16,36,0	2/2:0,0,20:24:255,255,255,59,60,0	1/2:0,10,8:18:255,150,195,255,0,255
+chr21	32944636	chr21:32944636:M	ACAACACAACACAACACAACACAACA	<7.2>	.	.	Motif=ACAAC	GT:AD:DP:PL	0/0:21,0:21:0,63,255	0/0:29,0:29:0,87,255	0/1:18,9:27:165,0,255
+chr21	32950893	chr21:32950893:M	TTTTTTTTTTTTTTTTTTTT	<17>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:1,0,4,7:12:187,176,252,87,133,102,53,60,0,36	2/3:0,0,4,15:19:255,255,255,211,252,199,67,57,0,12	1/3:3,15,2,4:27:255,22,81,255,68,255,255,0,255,255
+chr21	32965121	chr21:32965121:M	ACACACACACACACACACACATACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,22:35:255,0,144	0/0:33,0:33:0,97,255	0/1:24,23:48:255,0,255
+chr21	32967436	chr21:32967436:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:19:84,0,113	1/1:2,16:19:251,21,0	0/0:14,0:15:0,44,255
+chr21	32976555	chr21:32976555:M	CACACACACACACACATACACACACACACACACACACACACACA	<15>,<21>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,15,9,0:24:255,162,210,255,0,255,255,250,255,255	1/3:3,11,0,8:23:255,96,238,255,230,255,255,0,255,255	2/2:0,0,12,0:18:224,255,255,37,39,0,237,255,16,255
+chr21	32986251	chr21:32986251:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,7,4:12:255,69,37,124,0,102	0/1:8,6,1:17:132,0,199,84,207,255	1/2:0,7,4:12:255,67,35,121,0,99
+chr21	32999572	chr21:32999572:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,21:22:255,66,0	0/1:17,18:35:255,0,255	1/1:3,45:48:255,69,0
+chr21	32999586	chr21:32999586:M	ACACACACACACACACACACACACACACACACACTGCACACCACACACCACACACCACACACACAC	<28.5>,<29>,<30>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,3,8:12:255,230,207,139,129,105,62,26,0,29	1/3:0,7,0,9:17:255,222,185,236,144,189,184,0,86,146	2/3:0,0,10,7:21:255,255,217,120,89,59,209,84,0,158
+chr21	33001056	chr21:33001056:M	TTTTTTTTTTTTTTTTT	<13>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,9,0:30:255,164,191,255,0,255,255,249,255,255	2/3:2,0,12,10:25:255,255,255,143,255,232,185,255,0,255	1/2:2,16,12,0:35:255,186,255,255,0,255,255,255,255,255
+chr21	33002579	chr21:33002579:M	TTTATTTATTTATTT	<4.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:14,16:31:220,0,182	0/1:14,17:32:217,0,163	0/1:14,12:26:148,0,186
+chr21	33007081	chr21:33007081:M	TTTTTTTTTTTTTTTTT	<14>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,1,15,4:27:224,246,255,0,91,58,218,255,6,255	1/2:1,19,15,0:38:255,249,255,255,0,255,255,255,255,255	0/3:9,0,0,10:19:124,179,255,178,255,255,0,161,137,106
+chr21	33038352	chr21:33038352:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41,1:43:255,108,0,255,108,255	1/2:1,25,9:36:255,148,64,255,0,255	0/1:25,20,0:45:241,0,255,255,255,255
+chr21	33038431	chr21:33038431:M	TTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7,0:9:240,27,0,237,27,233	2/2:0,0,3:4:102,100,98,12,12,0	0/1:14,4,0:21:100,0,255,119,255,255
+chr21	33039575	chr21:33039575:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,36:40:255,255,255,98,111,0	1/2:2,16,14:37:255,211,255,255,0,255	0/2:21,0,16:39:174,255,255,0,255,255
+chr21	33045483	chr21:33045483:M	AAAAAGAAAAAGAAA	<22.5>	.	.	Motif=AAAAAG	GT:AD:DP:PL	0/1:24,11:37:32,0,255	0/0:26,6:33:0,21,255	0/0:30,10:45:0,1,255
+chr21	33045491	chr21:33045491:M	AAAGAAAGAAAGAGAGAGAGAGAAAGGAAGGACGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,11:11:115,29,0	1/1:0,6:6:63,16,0	1/1:0,10:10:105,26,0
+chr21	33049858	chr21:33049858:M	AAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,3:4:89,10,0	0/1:2,5:8:124,0,47
+chr21	33051155	chr21:33051155:M	TTTTGTTTTGTTTTGTTGTGTTTTGTTTTGTTTTGTTTTG	<4>,<6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,47,0:47:255,141,0,255,141,255	1/2:0,22,11:33:255,255,222,255,0,255	0/1:16,19,0:35:255,0,255,255,255,255
+chr21	33065862	chr21:33065862:M	AAAAAAAAAAAAGAGAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:35:0,102,255	0/0:29,1:32:0,76,255	0/1:17,25:44:255,0,185
+chr21	33065949	chr21:33065949:M	CACACACACACACACACACACACACACACACAC	<15.5>,<17.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,37,0:39:255,114,0,255,116,255	1/2:0,14,13:30:255,228,255,252,0,255	0/1:13,22,0:36:255,0,124,255,193,255
+chr21	33078677	chr21:33078677:M	AAAAGAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:37:255,71,0	1/1:1,29:31:255,73,0	0/1:18,19:38:235,0,225
+chr21	33080202	chr21:33080202:M	ATATATATATATTTTAATAAAATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/1:25,14:40:255,0,255	0/1:5,2:7:47,0,104	0/1:12,7:19:176,0,242
+chr21	33082426	chr21:33082426:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<10.7>,<15.7>	.	.	Motif=TTA	GT:AD:DP:PL	2/2:0,0,9:9:171,195,255,27,27,0	1/2:0,3,2:6:108,35,46,78,0,72	0/2:7,0,6:13:73,110,255,0,128,91
+chr21	33083496	chr21:33083496:M	TTTTTCTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:11:162,15,0	0/0:9,1:10:0,12,137	0/1:7,10:18:124,0,80
+chr21	33085354	chr21:33085354:M	CTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTTTCTCTCT	<19>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,15:16:255,47,0	0/1:15,23:38:255,0,163
+chr21	33087286	chr21:33087286:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,23:25:255,37,0	1/1:2,19:22:255,29,0	0/1:12,17:31:219,0,147
+chr21	33090078	chr21:33090078:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:30,0,137	0/0:7,0:10:0,26,143	0/1:15,2:20:12,0,204
+chr21	33091444	chr21:33091444:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:32,1:33:0,78,255	0/1:16,16:32:197,0,197	0/1:22,19:41:237,0,255
+chr21	33096191	chr21:33096191:M	TTTTTCTTTTTTTCTTTTTTTTTCTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:28:255,0,181	0/1:13,13:26:229,0,226	0/1:11,15:26:255,0,184
+chr21	33096218	chr21:33096218:M	TGTGGGTGTGTGTGTGTGTGTGTGTGTG	<15>	.	.	Motif=TG	GT:AD:DP:PL	1/1:3,36:40:255,64,0	1/1:2,31:36:255,71,0	1/1:1,28:30:255,70,0
+chr21	33096431	chr21:33096431:M	AAACAAAACAAACAAACAAA	<4>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:40,0:41:0,119,255	0/1:27,16:43:173,0,255
+chr21	33098011	chr21:33098011:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:2,1,18:21:255,255,255,26,43,0	1/2:2,6,10:19:255,103,139,65,0,50	0/2:7,1,12:20:167,157,255,0,103,63
+chr21	33102753	chr21:33102753:M	AAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAAAAAAA	<49>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:100,14,0	.	0/1:3,2:5:40,0,69
+chr21	33103773	chr21:33103773:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,7:11:147,111,149,63,0,71	2/2:1,1,9:11:114,127,202,5,3,0	2/2:1,1,9:12:128,141,221,7,5,0
+chr21	33103788	chr21:33103788:M	AGAGAGAGAGAGAGAGAGA	<10>,<11.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:3,10,5:19:113,59,37,41,0,199	1/2:0,8,17:28:255,255,228,58,0,90	0/2:13,6,6:26:70,52,78,0,44,255
+chr21	33105431	chr21:33105431:M	AAAAAAAAATAAAAAAATAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:1,19:20:255,41,0	0/1:19,15:34:179,0,254
+chr21	33107256	chr21:33107256:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:8:77,0,6	1/1:1,5:6:67,1,0	0/1:2,1:5:23,0,21
+chr21	33109001	chr21:33109001:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTT	<3.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,34:34:255,102,0	0/1:14,26:40:255,0,255
+chr21	33112851	chr21:33112851:M	AAAAAGAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:39:255,115,0	1/1:2,34:36:255,70,0	0/1:22,32:54:255,0,242
+chr21	33118875	chr21:33118875:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,25:28:255,29,0	1/1:2,21:27:255,33,0	0/1:10,8:21:107,0,113
+chr21	33119648	chr21:33119648:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:3,33:36:255,53,0	0/1:23,24:47:255,0,255
+chr21	33124517	chr21:33124517:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:230,40,0	0/1:4,9:15:119,0,35	0/1:12,3:15:8,0,166
+chr21	33126872	chr21:33126872:M	TTTTTTTTGTTTTTTGGTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:156,26,0	1/1:1,7:9:111,9,0	0/1:0,4:7:51,0,4
+chr21	33126916	chr21:33126916:M	TATATATATATATATATATGTATA	<11>,<19>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,18:20:255,255,255,60,60,0	2/2:0,0,8:8:215,215,215,24,24,0	1/2:0,11,6:18:255,151,119,169,0,245
+chr21	33129284	chr21:33129284:M	TTATTTTATTATTATTATTATTATTATTATTATTATTATT	<11.3>,<16.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,14,7:21:255,183,141,255,0,255	2/2:0,0,1:1:29,29,29,3,3,0	1/2:0,19,7:26:255,184,127,255,0,255
+chr21	33135339	chr21:33135339:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,13,18:36:255,255,255,193,0,255	0/2:15,0,9:26:194,228,255,0,255,255	1/1:0,36,0:37:255,109,0,255,108,255
+chr21	33138253	chr21:33138253:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:32:255,94,0	0/1:16,14:31:154,0,198	0/1:12,19:31:251,0,124
+chr21	33147645	chr21:33147645:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:38:192,0,255	0/1:11,7:18:69,0,139	0/0:34,1:36:0,88,255
+chr21	33148646	chr21:33148646:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAAAGAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:6:35,0,36	0/1:3,2:5:19,0,36	0/0:6,0:6:0,18,104
+chr21	33151782	chr21:33151782:M	GAAGGAAGGAAAGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGG	<3.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:3,14:21:255,0,53	0/1:1,8:11:189,0,10	0/1:3,15:19:255,0,25
+chr21	33153210	chr21:33153210:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:18:41,0,158	0/0:18,0:20:0,58,255	0/1:7,9:20:105,0,99
+chr21	33155034	chr21:33155034:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	<4.8>	.	.	Motif=AGGG	GT:AD:DP:PL	0/1:3,11:16:255,0,32	0/1:4,6:15:156,0,64	0/1:2,1:3:16,0,43
+chr21	33160384	chr21:33160384:M	ACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/1:30,19:50:255,0,255	0/0:52,0:52:0,156,255
+chr21	33161914	chr21:33161914:M	TCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	<24>,<29>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,8,8:17:255,209,184,219,0,195	0/1:6,7,0:13:163,0,137,181,155,255	0/2:7,0,9:16:205,229,255,0,180,151
+chr21	33164953	chr21:33164953:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,8:33:120,0,255	0/1:15,14:30:255,0,255	0/0:38,0:40:0,114,255
+chr21	33173737	chr21:33173737:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:6:0,15,84	0/0:1,0:1:0,3,16	0/1:6,3:9:23,0,72
+chr21	33179246	chr21:33179246:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:25:144,0,163	0/1:13,8:21:76,0,163	0/0:23,1:27:0,58,255
+chr21	33188370	chr21:33188370:M	TTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,11:27:223,0,255	0/1:13,7:21:139,0,255	0/1:20,5:28:64,0,255
+chr21	33191112	chr21:33191112:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,31:56:255,0,255	0/1:18,21:39:255,0,209	0/1:20,30:50:255,0,225
+chr21	33194740	chr21:33194740:M	AAAACAAAAAAAAAAAGGAAAAAGAAAAAGAAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:15:59,0,125	0/1:14,15:29:180,0,161	0/1:10,14:24:184,0,112
+chr21	33195716	chr21:33195716:M	AAAAAAGAAAAAAAAAAAAAGAAAGAAAAAGAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:124,0,89	0/1:11,10:21:107,0,124	0/1:6,16:23:210,0,47
+chr21	33205242	chr21:33205242:M	TTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:9:44,0,43	0/0:4,1:6:0,1,60	0/1:3,1:5:13,0,36
+chr21	33205385	chr21:33205385:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,4:11:76,0,148	1/1:0,4:4:108,12,0	0/0:8,0:10:0,24,226
+chr21	33217093	chr21:33217093:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:22:78,0,185	0/1:12,11:28:106,0,171	0/0:25,2:31:0,54,255
+chr21	33217359	chr21:33217359:M	AAAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,7:15:162,125,255,0,150,129	0/2:3,3,15:22:255,203,240,0,34,32	0/1:2,10,1:15:255,0,24,165,41,194
+chr21	33222102	chr21:33222102:M	TTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5,1:7:198,0,8,70,9,79	1/2:0,3,1:4:135,17,5,50,0,38	0/2:1,0,4:6:129,68,122,0,57,43
+chr21	33224958	chr21:33224958:M	TTTTTTTGTTTTTTTTTTTTCTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:31:0,57,255	0/0:28,1:31:0,47,255	0/1:10,10:29:196,0,229
+chr21	33226687	chr21:33226687:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:21:0,43,255	0/1:11,4:15:23,0,140	0/0:6,0:8:0,17,102
+chr21	33229879	chr21:33229879:M	CCCCGCCCCTGGCTCCGCCCCCGCCCCCGC	<2>	.	.	Motif=CCCCGC	GT:AD:DP:PL	0/1:11,4:15:57,0,220	0/1:24,4:28:18,0,255	0/1:18,10:28:174,0,255
+chr21	33231006	chr21:33231006:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:50:0,147,255	0/1:22,17:39:189,0,255	0/1:18,29:48:255,0,202
+chr21	33232655	chr21:33232655:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:31:150,0,255	0/1:11,8:20:156,0,238	0/0:53,0:54:0,159,255
+chr21	33234184	chr21:33234184:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0,0:22:0,66,255,66,255,255	0/1:11,8,0:21:161,0,255,130,255,255	0/2:12,0,7:22:141,115,255,0,255,255
+chr21	33237079	chr21:33237079:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<18>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/3:12,0,0,5:18:112,148,255,148,255,255,0,255,255,255	2/3:0,0,8,4:14:255,255,255,114,116,90,215,232,0,218	0/1:7,12,0,0:21:255,0,150,255,192,255,255,196,255,255
+chr21	33238775	chr21:33238775:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,18:42:214,0,255	0/1:21,12:35:111,0,255	0/1:26,21:48:255,0,255
+chr21	33240815	chr21:33240815:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,15,0:26:196,0,116,229,187,255	0/2:11,0,5:16:88,83,228,0,186,255	0/1:15,12,0:27:133,0,188,178,255,255
+chr21	33242753	chr21:33242753:M	GTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,4,7:12:255,177,162,119,0,98	1/2:0,2,5:7:184,129,123,55,0,40	1/1:0,9,0:10:255,30,0,255,30,255
+chr21	33246073	chr21:33246073:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:16,2:19:0,21,255	0/1:10,11:24:138,0,127
+chr21	33247255	chr21:33247255:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:53,0,213	0/0:8,1:10:0,6,192	.
+chr21	33249344	chr21:33249344:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5,0:6:128,0,11,87,25,99	0/1:2,6,0:8:146,0,33,99,49,131	1/2:0,6,6:14:255,103,66,110,0,76
+chr21	33252082	chr21:33252082:M	ATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<8.5>,<11.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:12,10,0:36:93,0,117,158,183,255	0/1:17,13,0:41:109,0,163,198,251,255	1/2:0,14,9:34:255,221,187,236,0,255
+chr21	33262764	chr21:33262764:M	CTCTCTCTCTCT	<7.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,25:30:255,14,0	1/1:0,32:38:255,3,0	0/1:11,13:25:169,0,152
+chr21	33262775	chr21:33262775:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:35:191,0,107	0/1:13,22:38:210,0,101	0/0:26,1:30:0,48,255
+chr21	33263855	chr21:33263855:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:14:54,0,89	0/1:7,7:17:82,0,94	1/1:1,15:18:255,34,0
+chr21	33267483	chr21:33267483:M	TTTTTTTTTTTGTTTGTTTGTTTTTTTGTTTTTTTGTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:58,0,3	1/1:0,9:9:156,26,0	0/1:1,4:6:61,0,1
+chr21	33269652	chr21:33269652:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:71,0,55	0/0:14,2:19:0,19,218	0/1:3,2:7:26,0,34
+chr21	33275148	chr21:33275148:M	TTTTCTTTTTTTTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,1,5:8:88,56,76,10,0,6	1/2:0,4,5:10:183,70,55,76,0,50	2/2:1,0,11:13:174,167,190,18,26,0
+chr21	33277335	chr21:33277335:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:24:255,63,0	1/1:1,11:15:255,9,0	1/1:1,21:26:255,41,0
+chr21	33277644	chr21:33277644:M	TTTTCTTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTT	<48>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:189,21,0	0/1:1,1:4:21,0,20	1/1:0,5:6:131,15,0
+chr21	33287342	chr21:33287342:M	GTTTGTTTGTTT	<4>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:15,17:32:234,0,196	0/1:20,14:34:153,0,255	1/1:0,40:40:255,118,0
+chr21	33288382	chr21:33288382:M	CACACACACACACACACACACACAGACAC	<12.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,11:24:239,0,198	0/1:9,7:19:165,0,180	1/1:0,26:27:255,78,0
+chr21	33293807	chr21:33293807:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,87,0	1/1:0,31:37:255,101,0	0/1:10,24:34:255,0,160
+chr21	33294370	chr21:33294370:M	TGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,10:19:112,0,88	0/1:13,9:22:80,0,144	0/1:11,12:23:130,0,113
+chr21	33295672	chr21:33295672:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,10:28:255,107,111,233,0,188	1/2:1,2,8:11:138,90,109,16,0,0	0/1:0,8,1:14:216,0,6,136,17,139
+chr21	33296954	chr21:33296954:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:15:255,45,0	1/1:0,8:12:243,30,0	0/1:9,11:24:245,0,194
+chr21	33297431	chr21:33297431:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:26,19:49:186,0,255	0/0:43,1:46:0,117,255	0/1:16,14:30:142,0,175
+chr21	33300442	chr21:33300442:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11,0:19:248,0,145,180,122,255	1/2:0,14,15:30:255,200,155,230,0,148	0/0:33,0,2:35:0,99,255,69,255,255
+chr21	33303351	chr21:33303351:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:9:146,0,15	0/1:1,2:5:58,0,28	0/1:2,1:4:21,0,50
+chr21	33319699	chr21:33319699:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,8:33:49,0,255	0/0:26,2:36:0,62,255	0/1:14,15:33:179,0,142
+chr21	33322075	chr21:33322075:M	ATATACATATGGAATATACATATA	<1.8>	.	.	Motif=ATATAC	GT:AD:DP:PL	0/0:24,2:26:0,22,255	0/0:19,2:21:0,7,255	1/1:0,26:26:255,78,0
+chr21	33322236	chr21:33322236:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,6:39:0,41,255	0/0:16,2:19:0,30,255	0/1:12,9:22:48,0,255
+chr21	33322290	chr21:33322290:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,6:44:0,58,255	0/0:14,2:16:0,23,255	0/1:17,9:26:34,0,255
+chr21	33322318	chr21:33322318:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:41,6:47:0,67,255	0/0:12,2:14:0,17,255	0/1:16,9:25:37,0,255
+chr21	33322939	chr21:33322939:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,5:45:0,73,255	0/0:6,1:7:0,9,150	0/1:6,11:17:86,0,122
+chr21	33322967	chr21:33322967:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:39,5:44:0,70,255	0/0:6,1:7:0,9,150	0/1:12,11:23:68,0,255
+chr21	33322995	chr21:33322995:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:47,5:52:0,94,255	0/0:6,1:7:0,9,150	0/1:18,11:29:50,0,255
+chr21	33323023	chr21:33323023:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:45,5:50:0,88,255	0/0:6,1:7:0,9,150	0/1:19,11:30:47,0,255
+chr21	33323051	chr21:33323051:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,5:43:0,67,255	0/0:4,1:5:0,3,98	0/1:15,11:26:59,0,255
+chr21	33323079	chr21:33323079:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:2,5:7:41,0,36	1/1:0,1:1:12,3,0	1/1:0,11:11:134,30,0
+chr21	33323107	chr21:33323107:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,5:8:38,0,61	0/1:1,1:2:6,0,22	1/1:0,10:10:122,28,0
+chr21	33326213	chr21:33326213:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:20:255,0,152	0/1:8,13:24:255,0,171	0/1:9,14:25:255,0,184
+chr21	33326786	chr21:33326786:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:43:0,125,255	0/0:38,0:38:0,110,255	0/1:13,24:37:255,0,105
+chr21	33333615	chr21:33333615:M	TTTTTTTTTTTCTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:8:0,23,134	0/1:3,2:6:15,0,42	0/1:5,4:9:39,0,55
+chr21	33335916	chr21:33335916:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:24:142,0,107	0/1:11,7:18:60,0,124	0/1:12,13:25:142,0,125
+chr21	33336748	chr21:33336748:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:40,1,0	1/1:1,5:6:64,1,0	0/1:3,4:8:53,0,26
+chr21	33337628	chr21:33337628:M	ATATATACACTATATATATACATACTGTATATATA	<16.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,13:25:147,0,126	0/1:20,16:36:155,0,214	0/1:19,18:37:192,0,202
+chr21	33338532	chr21:33338532:M	AAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:198,24,0	1/1:0,9:11:243,23,0	0/1:12,5:19:81,0,255
+chr21	33339928	chr21:33339928:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,3:5:40,34,56,0,8,5	0/1:2,5,0:7:121,0,36,81,32,94	0/2:2,1,6:9:86,67,116,0,17,8
+chr21	33342689	chr21:33342689:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:24,0,96	0/0:5,0:7:0,20,108	0/0:6,0:8:0,21,118
+chr21	33344162	chr21:33344162:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,26:45:255,0,227	0/1:23,22:47:255,0,255	0/1:21,27:49:255,0,253
+chr21	33344761	chr21:33344761:M	TTTACTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.8>,<13.8>,<14.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/3:0,15,0,10:25:255,255,227,255,183,255,255,0,255,255	1/3:0,1,0,2:3:84,55,51,52,35,44,27,0,17,21	2/3:0,0,7,8:15:255,255,255,145,144,102,127,108,0,84
+chr21	33347132	chr21:33347132:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:22:121,0,123	0/1:6,9:17:127,0,55	0/1:6,8:17:105,0,76
+chr21	33360397	chr21:33360397:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,4:35:0,29,255	0/0:29,0:32:0,93,255	0/1:15,16:32:196,0,186
+chr21	33367887	chr21:33367887:M	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTCTTTTCTCTTCTTTTCTTTT	<12.6>	.	.	Motif=TCTTT	GT:AD:DP:PL	0/1:5,9:14:132,0,55	0/1:7,5:12:55,0,92	0/1:7,5:12:58,0,96
+chr21	33368257	chr21:33368257:M	TGTGTGTGTGTGTGTGTGTG	<9>	.	.	Motif=TG	GT:AD:DP:PL	0/0:45,1:46:0,117,255	0/0:41,1:43:0,108,255	0/1:15,13:29:167,0,194
+chr21	33371123	chr21:33371123:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,22:36:255,0,157	1/1:1,29:31:255,73,0	0/1:16,16:33:196,0,205
+chr21	33372253	chr21:33372253:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:7:33,0,35	0/0:1,0:2:0,5,26	0/1:1,2:3:26,0,8
+chr21	33373135	chr21:33373135:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:35,0,128	0/1:10,4:14:29,0,134	0/0:15,0:18:0,52,255
+chr21	33373435	chr21:33373435:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:28:0,81,255	0/1:7,4:14:87,0,155	0/0:14,0:17:0,45,255
+chr21	33379468	chr21:33379468:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:22:0,45,255	0/1:6,7:15:78,0,77	0/0:16,1:19:0,37,255
+chr21	33382245	chr21:33382245:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/1:18,11:30:109,0,234	0/0:27,1:28:0,64,255
+chr21	33384083	chr21:33384083:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,6,57	1/1:0,7:7:196,21,0	.
+chr21	33384265	chr21:33384265:M	GTTTTTTGTTTGTTGGTTGGTTTGTTTGTTTGTTT	<4.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:20,7:27:107,0,255	0/0:28,2:32:0,35,255	0/0:18,2:20:0,5,255
+chr21	33385978	chr21:33385978:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/1:17,9:27:81,0,222	0/0:18,0:19:0,55,255
+chr21	33388953	chr21:33388953:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,15,143	0/1:5,7:13:164,0,100	0/0:7,0:7:0,21,196
+chr21	33392702	chr21:33392702:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<12>	.	.	Motif=GT	GT:AD:DP:PL	0/0:16,0:18:0,50,255	0/1:8,8:17:98,0,81	0/0:23,0:25:0,73,255
+chr21	33398652	chr21:33398652:M	TGTGATGTGATGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:15,0:18:0,43,255	0/1:4,8:14:212,0,99	0/0:13,1:14:0,9,255
+chr21	33401595	chr21:33401595:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAATAAATAA	<14.8>,<15.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:3,5,0:8:73,0,35,82,57,162	1/1:0,6,0:6:109,18,0,109,18,109	0/2:9,0,5:15:102,92,229,0,173,229
+chr21	33405104	chr21:33405104:M	AAAAAAAAAAAAAAAAAAAAGAAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,2:11:4,31,255,0,160,130	0/1:1,11,1:15:255,0,12,170,19,168	0/2:6,0,3:10:24,44,210,0,113,88
+chr21	33406649	chr21:33406649:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,4:34:0,27,255	0/1:14,7:21:58,0,177	0/0:24,1:27:0,61,255
+chr21	33410167	chr21:33410167:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:17:87,0,115	1/1:2,22:26:255,41,0	0/0:14,0:15:0,41,250
+chr21	33416822	chr21:33416822:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:254,41,0	1/1:1,11:12:173,18,0	0/1:5,12:17:163,0,39
+chr21	33419460	chr21:33419460:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:25,13:39:134,0,255	0/1:25,24:50:255,0,255	0/0:42,0:42:0,124,255
+chr21	33421332	chr21:33421332:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,5:10:45,0,34	0/1:3,6:10:67,0,14	0/0:7,2:13:0,4,101
+chr21	33423829	chr21:33423829:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,0,14:24:255,253,255,0,182,219	1/2:0,17,7:25:255,129,60,249,0,226	0/1:16,14,1:32:171,0,208,196,255,255
+chr21	33428210	chr21:33428210:M	TTTTTTTTTTTTTTTT	<14>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,0,6:23:107,159,255,0,255,255	0/2:8,0,7:18:151,186,255,0,210,181	0/1:14,16,0:34:255,0,255,255,255,255
+chr21	33433790	chr21:33433790:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:4,24:30:255,16,0	0/1:21,21:44:255,0,255
+chr21	33437983	chr21:33437983:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,6:22:41,0,218	0/0:15,2:18:0,16,219	0/1:13,6:20:45,0,176
+chr21	33438732	chr21:33438732:M	TTTTTTTTTTTCTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,30:34:255,80,0	1/1:1,23:24:255,53,0	0/1:22,16:38:181,0,255
+chr21	33442012	chr21:33442012:M	TTTGTTTGCTTGTTTGTTTG	<4>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,40:40:255,118,0	0/1:20,26:46:255,0,239
+chr21	33442921	chr21:33442921:M	AAAAAAAAAAACAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:1,37:40:255,99,0	0/1:27,24:51:255,0,255
+chr21	33443893	chr21:33443893:M	TTTTTTTTTGTTTGTTTGTTTGTTTTTTT	<22>,<30>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,17:35:255,255,255,255,0,255	2/2:0,0,29:29:255,255,255,85,87,0	0/1:18,23,0:41:255,0,255,255,255,255
+chr21	33444804	chr21:33444804:M	AAAAAAAAAAAAAAAAAGAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:2:14,3,0	1/1:0,3:3:84,9,0	0/0:4,0:4:0,12,119
+chr21	33445084	chr21:33445084:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,2:16:0,12,207	0/1:7,3:12:34,0,82	0/0:14,0:14:0,41,237
+chr21	33445787	chr21:33445787:M	AAAAAAAAAAGGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:31:186,0,204	0/0:27,0:29:0,84,255	0/1:16,24:41:255,0,178
+chr21	33446214	chr21:33446214:M	TTTTTCTTTTATTTTTTTTATTTTTTATTTTTTATTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:207,0,255	0/1:6,12:20:255,0,108	0/0:32,0:34:0,101,255
+chr21	33446636	chr21:33446636:M	ACACACACACACACACACACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,3:16:8,0,189	0/1:13,5:18:37,0,180	0/0:17,1:19:0,38,255
+chr21	33447144	chr21:33447144:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,19:23:255,30,0	1/1:2,21:23:255,32,0	0/1:18,12:32:123,0,247
+chr21	33447682	chr21:33447682:M	ACACACACACACACACACACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,24,13:39:255,177,68,255,0,187	0/2:12,0,12:27:255,153,255,0,255,255	0/1:12,7,0:24:140,0,255,67,255,255
+chr21	33447720	chr21:33447720:M	ATATATATATATA	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,2:2:49,6,0	1/1:0,3:4:99,12,0	0/0:23,1:25:0,50,255
+chr21	33454103	chr21:33454103:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,3:5:103,52,38,30,0,21	0/1:2,5,1:8:71,0,10,53,17,99	0/1:3,4,0:7:49,0,31,58,51,131
+chr21	33457652	chr21:33457652:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:17:234,31,0	1/1:1,12:15:207,26,0	0/1:9,7:17:84,0,107
+chr21	33459668	chr21:33459668:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:16:177,0,8	1/1:0,9:9:154,26,0	0/1:13,6:22:60,0,176
+chr21	33464199	chr21:33464199:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:27:141,0,186	0/0:26,0:28:0,81,255	1/1:0,13:14:242,41,0
+chr21	33464805	chr21:33464805:M	AAAAAAAAAAAAAAAAAAAACAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:24:255,72,0	1/1:0,29:29:255,87,0	0/1:1,6:9:146,0,7
+chr21	33466781	chr21:33466781:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,50:50:255,148,0	1/1:1,36:37:255,91,0	0/1:16,31:47:255,0,161
+chr21	33472030	chr21:33472030:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:38:0,94,255	0/0:23,0:24:0,69,255	0/1:16,11:30:82,0,177
+chr21	33473458	chr21:33473458:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,1,5:13:64,80,213,0,75,84	0/2:10,2,3:19:35,36,201,0,100,146	0/1:8,4,0:13:46,0,105,81,120,240
+chr21	33473655	chr21:33473655:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:27:0,62,255	0/0:20,2:23:0,33,255	0/1:14,14:33:180,0,167
+chr21	33476761	chr21:33476761:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:53,9,0	1/1:0,4:5:66,11,0	0/1:2,2:5:20,0,30
+chr21	33483226	chr21:33483226:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:36,0,29	0/1:8,3:12:26,0,101	0/1:5,4:9:43,0,61
+chr21	33485003	chr21:33485003:M	TTGTTGTTGTTGTTGTTGTTGTT	<8.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:17,11:28:129,0,247	0/1:11,22:33:255,0,103	0/0:24,0:24:0,71,255
+chr21	33486707	chr21:33486707:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/1:9,7:17:70,0,113	0/0:18,3:24:0,16,255
+chr21	33492341	chr21:33492341:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:12:148,90,114,82,0,99	1/2:0,7,2:11:146,34,25,137,0,191	0/1:5,6,0:12:83,0,55,114,76,238
+chr21	33493267	chr21:33493267:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:2,31:34:255,64,0	0/1:24,18:42:204,0,255
+chr21	33494494	chr21:33494494:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:110,0,13	1/1:0,3:5:87,2,0	1/1:0,2:4:82,12,0
+chr21	33494613	chr21:33494613:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:12:11,0,118	0/1:10,5:19:58,0,127	0/0:20,2:24:0,32,255
+chr21	33496461	chr21:33496461:M	CTCTCTCTCTCTC	<7.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:22,16:39:193,0,255	0/1:17,8:25:72,0,235	0/1:16,13:29:159,0,216
+chr21	33498801	chr21:33498801:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:32:153,0,191	0/1:11,9:25:89,0,153	0/1:9,14:26:174,0,99
+chr21	33499432	chr21:33499432:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,12:31:255,218,131,255,0,237	1/2:0,14,5:21:255,87,26,255,0,207	0/1:8,12,0:23:255,0,182,219,209,255
+chr21	33499903	chr21:33499903:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:11:7,0,116	0/1:11,5:19:50,0,144	0/0:20,1:24:0,52,255
+chr21	33503184	chr21:33503184:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATT	<7.2>,<10.2>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:12,0,10:22:130,192,255,0,230,169	1/2:0,16,4:20:255,72,59,255,0,255	0/0:24,0,0:25:0,72,255,74,255,255
+chr21	33503371	chr21:33503371:M	TTTTTTTTTTTTTTTTTTTTT	<15>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,2:18:255,35,2,255,0,255	1/2:0,5,3:9:177,50,58,134,0,126	0/1:4,12,0:16:255,0,67,255,70,255
+chr21	33512290	chr21:33512290:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:9:98,0,1	0/1:3,2:5:19,0,36	0/1:4,4:10:63,0,40
+chr21	33513084	chr21:33513084:M	TGTGTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:5,4:12:90,0,113	0/1:6,8:16:174,0,138	0/1:5,7:13:163,0,99
+chr21	33516247	chr21:33516247:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:87,15,0	0/1:2,4:8:52,0,20	1/1:0,4:4:68,12,0
+chr21	33519553	chr21:33519553:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:14:101,0,48	0/0:13,2:16:0,4,177	0/1:3,8:12:103,0,26
+chr21	33519824	chr21:33519824:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:25:255,72,0	1/1:1,27:32:255,75,0	1/1:1,19:21:255,43,0
+chr21	33523968	chr21:33523968:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,0:2:5,0,5	0/0:3,0:4:0,11,61	0/1:4,3:7:30,0,47
+chr21	33528612	chr21:33528612:M	AAAAAAGAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:28:145,0,183	0/1:17,5:24:27,0,234	0/1:16,14:30:161,0,197
+chr21	33528757	chr21:33528757:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,21:35:255,0,98	0/0:24,2:26:0,42,255	0/1:10,12:28:156,0,127
+chr21	33529451	chr21:33529451:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:22,0,84	0/0:11,2:13:0,4,151	0/0:11,0:12:0,35,202
+chr21	33531570	chr21:33531570:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,6:24:25,0,126	0/1:15,4:28:6,0,139	0/0:19,3:26:0,14,202
+chr21	33533439	chr21:33533439:M	AAAAAAAAAAAAATAAATAAATAAATAAAAATAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2:9:12,0,54	0/1:2,7:10:65,0,1	0/1:6,3:10:14,0,53
+chr21	33538242	chr21:33538242:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:32,0,41	0/1:5,2:9:19,0,60	0/1:4,2:6:16,0,50
+chr21	33543531	chr21:33543531:M	CCCCTCCCCCTC	<2.2>	.	.	Motif=CCCCTC	GT:AD:DP:PL	1/1:0,37:37:255,102,0	1/1:0,31:31:255,86,0	1/1:0,36:36:255,100,0
+chr21	33547706	chr21:33547706:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:149,15,0	0/1:1,2:4:55,0,23	.
+chr21	33547891	chr21:33547891:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,11,13:26:255,190,180,195,0,143	1/2:0,14,17:34:255,254,204,255,0,185	0/1:16,15,1:32:255,0,255,255,255,255
+chr21	33549082	chr21:33549082:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,16:31:197,0,180	0/0:27,2:30:0,53,255	0/1:14,13:29:154,0,172
+chr21	33555095	chr21:33555095:M	GCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGC	<3.8>,<7.3>	.	.	Motif=GCCGCA	GT:AD:DP:PL	1/2:1,6,12:19:255,239,244,120,0,107	1/2:0,7,5:12:255,113,92,149,0,134	1/2:1,11,4:16:255,65,56,226,0,237
+chr21	33556712	chr21:33556712:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,11:21:149,0,85	0/1:7,4:12:43,0,85	0/1:12,8:23:85,0,156
+chr21	33558960	chr21:33558960:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:2:19,3,0	1/1:0,3:3:51,9,0	1/1:0,3:3:52,9,0
+chr21	33564862	chr21:33564862:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:9:79,0,19	0/0:2,0:2:0,6,33	0/0:2,0:3:0,9,46
+chr21	33572169	chr21:33572169:M	TATATTATATATTTATATATATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,19:19:255,56,0	1/1:0,3:3:53,9,0	1/1:0,16:17:255,47,0
+chr21	33577605	chr21:33577605:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<24>,<34>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,4:8:121,121,121,14,14,0	2/2:0,0,3:5:94,94,94,12,12,0	1/1:0,8,0:11:255,30,0,255,30,255
+chr21	33580240	chr21:33580240:M	ATGAATGAATGAATGAATGAATGAATGAATG	<6.8>	.	.	Motif=ATGA	GT:AD:DP:PL	0/1:10,13:23:183,0,126	0/1:12,8:20:86,0,159	0/1:8,12:20:167,0,92
+chr21	33583201	chr21:33583201:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:171,21,0	1/1:0,3:4:88,10,0	0/0:1,0:1:0,3,27
+chr21	33584015	chr21:33584015:M	TATATATATATATATATATATATATATATATA	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:16:254,5,0	1/1:0,3:5:98,13,0	0/1:2,8:13:204,0,29
+chr21	33585388	chr21:33585388:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:8:31,0,58	0/0:6,1:7:0,3,86	0/1:2,3:7:33,0,33
+chr21	33594639	chr21:33594639:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:7:42,0,32	0/0:4,0:5:0,3,56	0/1:2,2:6:28,0,27
+chr21	33597615	chr21:33597615:M	TTTTTGTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:255,0,255	0/1:18,10:28:202,0,255	0/1:21,11:32:225,0,255
+chr21	33599639	chr21:33599639:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,128,0	1/1:0,43:44:255,128,0	1/1:1,38:40:255,100,0
+chr21	33604529	chr21:33604529:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,11:12:181,17,0	1/1:2,9:13:138,3,0	0/1:7,7:16:95,0,78
+chr21	33615155	chr21:33615155:M	TTTTTTTTTTTTTTTTTT	<15>,<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,10,1:24:255,182,127,230,0,164,255,135,213,255	1/2:0,15,9,0:25:255,156,82,255,0,198,255,130,255,255	2/3:1,1,10,4:16:255,213,255,42,67,40,175,131,0,148
+chr21	33618289	chr21:33618289:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:5:0,15,86	0/1:3,3:8:32,0,33	0/1:7,2:10:8,0,93
+chr21	33627740	chr21:33627740:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:11:49,0,45	0/1:2,3:6:44,0,16	0/1:2,4:7:60,0,15
+chr21	33628604	chr21:33628604:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:28:255,79,0	1/1:0,27:29:255,84,0	1/1:1,23:26:255,59,0
+chr21	33629067	chr21:33629067:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:30:255,70,0	1/1:1,22:26:255,58,0	1/1:0,27:28:255,82,0
+chr21	33634881	chr21:33634881:M	ATATATATATATATATATATATATA	<10.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,15,12:28:255,169,150,254,0,194	1/2:0,3,3:6:122,44,35,52,0,35	1/2:0,22,12:35:255,182,113,255,0,255
+chr21	33635347	chr21:33635347:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:53,9,0	1/1:1,5:8:91,6,0	1/1:1,6:8:98,6,0
+chr21	33637761	chr21:33637761:M	ATATATATATATATATATATATATATATA	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:33,0:38:0,101,255	0/1:5,8:17:217,0,65	0/0:20,1:24:0,41,255
+chr21	33637789	chr21:33637789:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:41,2:43:0,86,255	0/1:7,12:21:208,0,99	0/1:13,5:23:56,0,238
+chr21	33638211	chr21:33638211:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:11:0,15,159	0/1:2,3:7:41,0,24	0/1:4,4:9:43,0,51
+chr21	33639826	chr21:33639826:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,7,1,3:12:218,119,138,175,46,236,126,0,190,213	1/2:0,12,7,1:22:255,130,163,229,0,255,255,104,255,255	0/0:9,0,0,0:9:0,26,163,26,163,163,27,187,187,255
+chr21	33644828	chr21:33644828:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,17:44:191,0,255	0/1:17,8:26:66,0,236	0/1:21,19:42:236,0,255
+chr21	33650031	chr21:33650031:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:31:0,74,255	0/1:9,3:12:9,0,97	0/0:24,0:25:0,71,255
+chr21	33655584	chr21:33655584:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,146	0/0:1,0:3:0,6,41	0/1:2,3:9:81,0,40
+chr21	33659706	chr21:33659706:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,4:6:94,0,13
+chr21	33669443	chr21:33669443:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,12:27:152,0,156	0/1:10,4:15:35,0,130	0/1:18,8:28:70,0,255
+chr21	33677343	chr21:33677343:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,79,255	0/0:29,1:32:0,76,255	0/1:20,7:28:42,0,255
+chr21	33681616	chr21:33681616:M	TTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTGTTTTGTTTTTGTTTT	<53>,<68>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,0,5:12:110,131,255,0,183,168	0/2:1,0,2:3:49,52,78,0,26,20	0/1:8,5,0:13:103,0,194,127,209,255
+chr21	33687231	chr21:33687231:M	AAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,15:32:185,0,223	0/1:12,17:29:215,0,127	0/0:28,1:29:0,67,255
+chr21	33687399	chr21:33687399:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,3,29	0/0:0,0:1:0,0,0	0/1:1,3:5:79,0,14
+chr21	33689968	chr21:33689968:M	AAAAAAAAAAAAAAATAATTAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,1:17:0,32,255	0/0:10,0:11:0,32,179	0/1:14,14:29:159,0,168
+chr21	33690600	chr21:33690600:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:26:170,0,170	0/1:19,8:27:63,0,255	0/0:26,0:26:0,77,255
+chr21	33697235	chr21:33697235:M	TTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:13:255,36,0	1/1:0,4:4:111,12,0	0/1:3,1:6:16,0,69
+chr21	33700952	chr21:33700952:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,12:24:255,255,255,201,0,255	1/2:0,9,7:19:255,179,169,153,0,224	1/2:0,11,7:18:255,180,152,187,0,255
+chr21	33703084	chr21:33703084:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,19,9:28:255,162,82,255,0,255	1/2:0,11,11:22:255,189,126,160,0,127	0/1:10,11,0:21:135,0,117,165,176,255
+chr21	33705111	chr21:33705111:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:14:55,0,99	0/0:7,1:9:0,9,110	0/0:3,0:3:0,9,51
+chr21	33711646	chr21:33711646:M	TGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGT	<23.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,18:29:255,255,239,175,0,97	0/1:6,9,0:16:223,0,122,160,100,220	0/2:9,1,10:20:128,130,255,0,138,99
+chr21	33713829	chr21:33713829:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,3:5:45,0,3
+chr21	33714623	chr21:33714623:M	TATATCTATATCTATATCTATA	<2.7>	.	.	Motif=TATATC	GT:AD:DP:PL	1/1:0,47:47:255,137,0	1/1:0,35:35:255,102,0	1/1:0,44:44:255,128,0
+chr21	33717730	chr21:33717730:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,6:23:51,0,243	0/1:16,20:37:255,0,183	0/1:24,18:42:213,0,255
+chr21	33724084	chr21:33724084:M	TGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGT	<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,17:30:255,255,239,177,0,153	1/2:1,17,14:32:255,232,159,240,0,224	0/1:23,16,0:40:182,0,255,254,255,255
+chr21	33725121	chr21:33725121:M	TTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTT	<30>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6,0:10:149,24,0,169,29,218	1/1:0,11,0:17:255,46,0,255,50,255	1/2:3,4,5:16:84,15,117,72,0,118
+chr21	33741895	chr21:33741895:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:7:86,0,60	0/1:7,3:10:45,0,158	0/0:5,0:7:0,17,145
+chr21	33748990	chr21:33748990:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:25:255,72,0	1/1:3,33:39:255,61,0	0/1:8,12:22:163,0,82
+chr21	33752825	chr21:33752825:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,13:31:140,0,230	0/1:12,12:27:134,0,145	0/0:38,1:40:0,99,255
+chr21	33763230	chr21:33763230:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:5:6,0,24	0/1:1,5:8:41,0,13	0/0:3,1:5:0,0,31
+chr21	33769700	chr21:33769700:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:34:198,0,225	0/1:17,21:38:255,0,187	0/0:33,1:35:0,84,255
+chr21	33770765	chr21:33770765:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,6:14:68,107,255,0,122,104	0/1:6,3,2:12:28,0,89,25,53,127	0/0:24,1,2:27:0,61,255,44,255,255
+chr21	33776387	chr21:33776387:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,13:32:147,0,213	0/1:10,5:18:38,0,133	0/1:16,6:24:45,0,219
+chr21	33776545	chr21:33776545:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:18:109,0,84	0/1:6,6:14:74,0,63	0/0:15,0:15:0,44,255
+chr21	33783692	chr21:33783692:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:30:122,0,223	0/1:8,13:23:178,0,71	0/1:21,10:32:94,0,255
+chr21	33784311	chr21:33784311:M	ACACACACACACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,17:29:255,0,218	0/1:7,13:21:255,0,129	0/1:6,15:23:255,0,106
+chr21	33795951	chr21:33795951:M	TTTTTTTTTTTTTTTTAATTTTTTATTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:255,209,182,30,29,0	1/2:2,7,15:24:255,221,189,67,0,73	1/2:0,8,5:13:247,88,51,119,0,104
+chr21	33798265	chr21:33798265:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,16:36:201,0,239	0/1:14,9:24:88,0,186	0/0:30,0:31:0,91,255
+chr21	33806048	chr21:33806048:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:112,12,0	0/1:12,5:19:87,0,255	0/1:10,5:17:93,0,237
+chr21	33813755	chr21:33813755:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/1:20,21:43:254,0,236	0/0:47,0:48:0,141,255
+chr21	33813824	chr21:33813824:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,8:25:74,0,239	0/1:13,12:25:136,0,153	0/0:38,1:41:0,99,255
+chr21	33840358	chr21:33840358:M	TTTTTTGTTTTTTAATTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:18,17:35:203,0,218	0/0:35,0:35:0,103,255
+chr21	33841938	chr21:33841938:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,3:4:42,53,90,0,15,6	1/2:1,6,3:13:125,51,73,87,0,137	0/0:14,1,1:16:0,29,240,29,219,240
+chr21	33842496	chr21:33842496:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:8,0,14:24:255,255,255,0,210,160	1/2:0,11,13:27:255,255,255,255,0,255	0/0:21,0,0:23:0,69,255,63,255,255
+chr21	33862165	chr21:33862165:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:29,3,0	1/1:0,0:2:28,6,0	1/1:0,4:7:131,16,0
+chr21	33867639	chr21:33867639:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:21:255,58,0	1/1:0,12:15:255,41,0	1/1:0,21:24:255,68,0
+chr21	33871430	chr21:33871430:M	AAAAAAACAAAAAAAAAAACAAAAAACAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,34:34:255,102,0	1/1:0,32:33:255,99,0
+chr21	33871740	chr21:33871740:M	AAAAAAAAAAAAAGAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,54:55:255,164,0	1/1:0,33:34:255,99,0	1/1:0,36:38:255,113,0
+chr21	33874157	chr21:33874157:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:51,9,0	1/1:0,3:3:49,9,0	0/1:2,3:6:35,0,19
+chr21	33874640	chr21:33874640:M	TTTTCTTTTTCTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:175,18,0	1/1:0,8:10:239,24,0	1/1:0,8:9:232,24,0
+chr21	33876234	chr21:33876234:M	TCTCTCTCTCTTTCTTCTCCTTCCTTCCTCTCTTCTTTTTCTCTCTTTCTTTCCTTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,18:18:255,54,0	1/1:0,27:27:255,81,0
+chr21	33876883	chr21:33876883:M	AGATATAGATATAGATGTAGATATAGATATAGATATAGA	<7.5>	.	.	Motif=AGATAT	GT:AD:DP:PL	1/1:0,16:16:255,47,0	1/1:0,20:20:255,59,0	1/1:0,24:24:255,71,0
+chr21	33877826	chr21:33877826:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,40:41:255,123,0	1/1:0,39:39:255,117,0	1/1:0,37:39:255,116,0
+chr21	33878009	chr21:33878009:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,9:23:255,102,34,153,0,86	1/2:0,11,28:39:255,255,187,128,0,11	1/2:0,16,12:30:255,135,46,195,0,108
+chr21	33881946	chr21:33881946:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:9:158,26,0	0/1:4,5:10:64,0,39	0/1:2,6:8:80,0,11
+chr21	33887320	chr21:33887320:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,39:43:255,117,0	0/1:15,22:38:255,0,171
+chr21	33887587	chr21:33887587:M	TTTTTTCTTTTTATTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:37:255,80,0	1/1:0,28:32:255,80,0	0/1:19,16:35:143,0,188
+chr21	33887944	chr21:33887944:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:26:255,58,0	1/1:0,43:43:255,126,0	0/1:24,21:46:243,0,255
+chr21	33895494	chr21:33895494:M	TGTGTGTGCGTGCGCGTGTTTGTGTGTGCATGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,14:14:242,41,0	0/1:12,7:19:70,0,155
+chr21	33908170	chr21:33908170:M	AAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:117,0,13	1/1:0,4:6:144,18,0	0/0:3,0:4:0,12,101
+chr21	33911663	chr21:33911663:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:2:0,1,2	0/1:7,3:10:20,0,86	0/0:1,0:3:0,6,27
+chr21	33914164	chr21:33914164:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,20:43:248,0,255	1/1:4,42:47:255,67,0	0/0:44,0:45:0,132,255
+chr21	33918442	chr21:33918442:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,22:38:255,0,142	1/1:0,32:33:255,97,0	0/0:25,2:27:0,43,255
+chr21	33921263	chr21:33921263:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:7,0,35	0/1:2,4:8:58,0,24	0/0:9,0:9:0,26,159
+chr21	33921419	chr21:33921419:M	AAAAAAAAAAAAAAAAAAACAAAAAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:10:50,0,57	1/1:0,11:13:201,37,0	0/0:6,0:6:0,18,102
+chr21	33925237	chr21:33925237:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:29:178,0,198	0/0:27,0:27:0,79,255	1/1:0,24:25:255,73,0
+chr21	33938189	chr21:33938189:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:8:166,45,30,87,0,65	2/2:1,1,6:8:95,74,95,6,6,0	1/2:1,6,5:12:196,56,63,85,0,69
+chr21	33940587	chr21:33940587:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:43:255,0,211	0/0:46,5:51:0,62,255	1/1:0,39:40:255,117,0
+chr21	33944306	chr21:33944306:M	AAAAAAAAAAAACAAAAAGAAAAAGAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8:18:95,0,132	0/1:9,8:19:87,0,115	1/1:0,30:30:255,88,0
+chr21	33945707	chr21:33945707:M	AAAAAAATAGAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:15:71,0,90	1/1:0,11:12:197,35,0	0/0:16,2:19:0,21,253
+chr21	33946576	chr21:33946576:M	TCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,18:34:134,0,108	0/1:14,15:29:106,0,93	1/1:2,32:34:255,69,0
+chr21	33952629	chr21:33952629:M	AAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:55,40,35,6,6,0	0/2:1,1,4:6:108,50,62,0,9,11	1/2:0,4,10:15:255,179,140,70,0,26
+chr21	33956189	chr21:33956189:M	AAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,3:9:162,52,65,85,0,104	1/2:0,1,4:8:153,125,121,28,0,8	2/2:0,0,7:7:208,208,208,21,21,0
+chr21	33956225	chr21:33956225:M	ACACACACACACACACACACACACACACACACACACACACGCACA	<20.5>,<21.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,12,5:18:255,255,255,141,141,106,209,209,0,255	0/3:8,0,1,5:14:111,135,255,120,252,228,0,202,116,202	1/2:0,12,6,0:18:255,88,52,206,0,156,255,104,207,255
+chr21	33960271	chr21:33960271:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,10:28:104,0,244	0/1:23,7:30:35,0,255	1/1:2,26:31:255,54,0
+chr21	33961657	chr21:33961657:M	AAAAAAAAAAAAAAAAGAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:12:36,0,107	0/1:2,3:6:35,0,19	1/1:1,6:8:94,6,0
+chr21	33965116	chr21:33965116:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2:41:0,74,255	0/1:19,12:31:121,0,244	0/0:45,0:49:0,143,255
+chr21	33965458	chr21:33965458:M	AATATAATAAATATAATAAATATA	<5.6>	.	.	Motif=AATAT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,8:8:255,24,0	1/1:0,32:32:255,96,0
+chr21	33971511	chr21:33971511:M	ACACACACACACACACACACACACACAC	<11>,<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,24,0:40:255,0,255,255,255,255	1/2:0,14,12:28:255,219,255,255,0,255	0/0:34,0,1:36:0,98,255,85,255,255
+chr21	33972215	chr21:33972215:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:22,18,30,0,18,23	1/1:0,3,0:3:51,9,0,51,9,51	1/2:0,2,7:9:201,120,96,30,0,9
+chr21	33974050	chr21:33974050:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACATATATACACACACACA	<33.5>,<39.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,2,3:5:108,80,74,34,0,43	1/1:0,3,0:3:49,9,0,58,9,90	2/2:0,0,0:2:3,3,3,1,1,0
+chr21	33976338	chr21:33976338:M	CACTCACTCACTCACTCACTCA	<3.5>,<4.5>	.	.	Motif=CACT	GT:AD:DP:PL	1/2:0,19,26:45:255,255,255,255,0,239	1/2:0,12,20:32:255,255,255,217,0,126	2/2:0,0,31:31:255,255,255,92,92,0
+chr21	33982429	chr21:33982429:M	ATTTTTATTTTCTATTTTTTTTTTTTTTTA	<4.8>	.	.	Motif=ATTTTT	GT:AD:DP:PL	0/1:10,10:20:141,0,141	0/1:10,10:22:149,0,137	0/0:19,1:21:0,41,255
+chr21	33989253	chr21:33989253:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:23,0,22	1/1:0,2:3:69,9,0	0/1:1,4:5:95,0,12
+chr21	34002127	chr21:34002127:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:11:35,0,70	0/0:13,2:20:0,17,208	0/0:11,2:16:0,10,178
+chr21	34007811	chr21:34007811:M	TGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,9:18:119,0,98	0/1:18,10:28:97,0,240	0/1:19,16:38:197,0,253
+chr21	34010553	chr21:34010553:M	AAAAAAAAATAAAAAAATAAAAATATAAAATAAAAAATAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12:30:142,0,255	0/1:6,13:19:178,0,52	0/1:9,12:21:162,0,107
+chr21	34012002	chr21:34012002:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,1,30:32:255,255,255,67,65,0	0/2:8,1,8:17:150,92,152,0,93,152	1/2:3,9,6:20:156,21,28,39,0,109
+chr21	34017396	chr21:34017396:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,20:40:255,0,255	0/1:17,23:43:255,0,202	0/0:33,2:35:0,66,255
+chr21	34026119	chr21:34026119:M	ATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCT	<19.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:6,0:6:0,18,113	0/0:8,0:8:0,24,143	0/1:9,4:13:35,0,127
+chr21	34029557	chr21:34029557:M	AAAAAAAAAAAATAAAATAAAAATAAAAATAAAAATAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:164,0,178	0/1:5,9:18:211,0,98	0/0:24,0:25:0,75,255
+chr21	34030496	chr21:34030496:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:41:226,0,255	1/1:4,28:33:255,26,0	0/0:46,3:49:0,90,255
+chr21	34044971	chr21:34044971:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6:17:68,0,134	0/0:10,0:12:0,35,194	1/1:0,12:12:215,35,0
+chr21	34045613	chr21:34045613:M	ATAATAATAATAATA	<6>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:20,19:39:252,0,255	0/0:41,0:41:0,121,255	1/1:1,43:44:255,111,0
+chr21	34047500	chr21:34047500:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,2:31:0,51,255	0/1:14,5:20:38,0,185	0/0:23,2:27:0,42,255
+chr21	34049832	chr21:34049832:M	ACACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,7,1:9:216,24,0,140,9,117	1/2:0,3,8:12:197,110,98,60,0,27	.
+chr21	34051025	chr21:34051025:M	ACACACACACACACACACACATACACACACACACACACAGACATACACACACACACA	<24.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,1,17:18:255,255,255,54,35,0	0/2:9,0,11:21:254,184,255,0,240,208	1/2:0,18,10:29:255,173,90,255,0,243
+chr21	34051448	chr21:34051448:M	TAAAAATAAAAA	<1.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:22,23:45:255,0,255	1/1:0,45:45:255,135,0
+chr21	34053014	chr21:34053014:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:19:71,0,161	1/1:0,19:20:255,58,0	0/0:16,3:19:0,3,230
+chr21	34053864	chr21:34053864:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:77,9,0	0/1:1,3:5:65,0,15	1/1:0,2:2:49,6,0
+chr21	34055336	chr21:34055336:M	CCTGGGCCTGGG	<2.2>	.	.	Motif=CCTGGG	GT:AD:DP:PL	1/1:0,24:24:255,66,0	1/1:0,33:33:255,91,0	1/1:0,32:32:255,89,0
+chr21	34055867	chr21:34055867:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,28	1/1:0,3:4:72,1,0	0/1:1,1:4:19,0,32
+chr21	34056514	chr21:34056514:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3:18:42,0,255	0/1:4,5:10:121,0,80	0/1:13,4:19:55,0,255
+chr21	34061096	chr21:34061096:M	AAAAAAAAAAAAAAAGAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,8,3:18:209,87,68,148,0,222	1/2:0,7,8:18:255,198,200,114,0,167	1/2:1,5,1:13:80,18,39,64,0,138
+chr21	34061108	chr21:34061108:M	AAAGAAAAGAAAGAAA	<3.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,16:16:255,47,0	1/1:0,19:19:255,55,0	1/1:0,12:12:197,35,0
+chr21	34070391	chr21:34070391:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,15:43:152,0,255	0/1:21,34:55:255,0,206	0/1:14,17:31:217,0,161
+chr21	34084280	chr21:34084280:M	GTGCTTGTGCTT	<2.2>	.	.	Motif=GTGCTT	GT:AD:DP:PL	0/1:26,19:45:255,0,255	0/1:28,19:47:255,0,255	0/0:43,0:43:0,129,255
+chr21	34086512	chr21:34086512:M	TGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,10:29:109,0,249	1/1:0,33:35:255,100,0	0/1:18,18:37:226,0,217
+chr21	34092126	chr21:34092126:M	ATATATATATATATA	<8.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,18:33:255,255,249,245,0,191	1/1:0,40,0:40:255,118,0,255,118,255	1/2:0,19,17:36:255,255,212,255,0,250
+chr21	34093239	chr21:34093239:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6:20:48,0,191	0/0:17,0:17:0,50,255	0/1:16,9:27:81,0,213
+chr21	34103316	chr21:34103316:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,17:34:212,0,183	0/1:20,14:36:137,0,255	0/1:8,27:37:255,0,37
+chr21	34116179	chr21:34116179:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGT	<21.5>,<22.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,6,0,4:13:255,111,100,228,120,219,168,0,117,166	0/3:3,0,0,7:12:207,217,255,217,255,255,0,80,50,56	1/2:0,10,8,0:19:255,115,82,182,0,130,255,137,183,255
+chr21	34136137	chr21:34136137:M	TTTTTCTTTTCTTTTTTCTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:21:0,43,255	0/0:34,0:34:0,100,255	0/1:10,15:25:200,0,109
+chr21	34152398	chr21:34152398:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,1:7:53,8,6,49,0,118	1/2:2,2,3:8:55,38,56,9,0,66	0/1:4,2,0:7:6,0,41,23,50,127
+chr21	34156610	chr21:34156610:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:20:255,39,0	0/1:9,9:19:102,0,111	1/1:0,34:36:255,105,0
+chr21	34156782	chr21:34156782:M	AAAAAAAATAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,8:20:158,0,255	0/1:14,14:28:255,0,255	0/1:32,17:50:255,0,255
+chr21	34156832	chr21:34156832:M	TTTTCTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:29:193,0,165	0/1:22,24:46:255,0,252	0/1:28,19:48:214,0,255
+chr21	34157173	chr21:34157173:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<18>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,12,0:22:255,0,206,218,244,255	0/1:11,17,0:28:255,0,231,255,255,255	0/2:9,1,15:27:255,250,255,0,235,210
+chr21	34164894	chr21:34164894:M	TTTTTTTTTTTTCTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:23:159,0,129	0/1:16,11:29:111,0,219	0/1:14,11:26:135,0,181
+chr21	34169333	chr21:34169333:M	TTATTTATTTATTTATTTATTTATTTAT	<6>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,35:35:255,103,0	1/1:0,35:35:255,103,0
+chr21	34169520	chr21:34169520:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:20:255,59,0	1/1:0,16:22:255,59,0	1/1:0,14:17:255,50,0
+chr21	34173737	chr21:34173737:M	AACAACAACAACAACAACAACAACAACAACAACAACAACA	<12.3>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,28:30:255,88,0	1/1:0,16:16:255,47,0	1/1:0,32:32:255,94,0
+chr21	34190143	chr21:34190143:M	CACACACACACACACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/1:16,21:38:255,0,255	0/1:30,11:41:255,0,255	1/1:0,39:41:255,123,0
+chr21	34193227	chr21:34193227:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:10,20:30:255,0,188	0/0:3,0:3:0,9,83	0/1:7,6:13:125,0,155
+chr21	34196837	chr21:34196837:M	ATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,19:35:255,0,204	0/1:16,10:26:104,0,213	0/0:40,0:40:0,118,255
+chr21	34202389	chr21:34202389:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>,<25.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,6,5,3:17:255,74,42,85,16,53,229,0,11,223	1/2:0,8,6,0:15:255,69,28,91,0,49,255,69,91,255	0/3:6,0,0,10:22:247,255,255,255,255,255,0,183,160,148
+chr21	34202433	chr21:34202433:M	GAGAGAGAGAGAGAGAGAAAGAG	<13.5>,<67.5>	.	.	Motif=GA	GT:AD:DP:PL	1/2:0,1,5:7:83,49,43,37,0,27	0/2:11,0,7:18:35,68,255,0,236,255	0/1:8,5,0:14:74,0,143,110,176,255
+chr21	34203756	chr21:34203756:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,15:36:176,0,255	0/1:13,15:28:181,0,146	0/0:29,0:29:0,85,255
+chr21	34207705	chr21:34207705:M	ACACACACACACACACACACACACACACACACACACACACACAC	<18>,<21>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,7:29:255,129,127,255,0,255	1/2:0,11,5:19:255,91,102,255,0,255	1/1:0,19,0:23:255,66,0,255,66,255
+chr21	34210825	chr21:34210825:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:1,38:40:255,97,0	1/1:2,45:48:255,101,0
+chr21	34213151	chr21:34213151:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,2,5:11:82,41,125,0,27,35	1/2:2,3,4:10:80,11,67,5,0,25	1/2:0,4,8:12:224,119,107,70,0,36
+chr21	34221642	chr21:34221642:M	ACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/0:41,0:43:0,128,255	0/1:17,14:32:255,0,255	0/0:41,0:44:0,131,255
+chr21	34224729	chr21:34224729:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:6,0,42	1/1:0,4:4:68,12,0	0/1:3,5:9:61,0,38
+chr21	34224877	chr21:34224877:M	TTTATTTATTTATTTATTTATTTATTTA	<8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:12,14:26:178,0,142	0/0:39,0:39:0,115,255
+chr21	34228482	chr21:34228482:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	<13.5>,<14.5>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:1,10,12:23:255,207,163,145,0,135	1/1:1,22,0:23:255,50,0,255,67,255	0/2:15,1,12:28:255,204,255,0,255,255
+chr21	34236881	chr21:34236881:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/1:19,18:39:210,0,230	0/0:39,1:42:0,105,255
+chr21	34239301	chr21:34239301:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,93	1/1:1,9:10:132,12,0	0/1:4,4:8:44,0,45
+chr21	34249910	chr21:34249910:M	AAAAAAAAAGAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:24,13:37:124,0,255	0/0:43,0:44:0,129,255
+chr21	34256624	chr21:34256624:M	CACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,10:24:198,0,247	0/0:37,0:42:0,122,255	0/1:14,13:32:255,0,255
+chr21	34260532	chr21:34260532:M	TATATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,11:32:109,0,255	0/0:3,0:5:0,8,51	0/1:10,9:19:106,0,124
+chr21	34271310	chr21:34271310:M	CACACACACACACACACACACACACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/0:32,0:34:0,101,255	0/1:17,10:27:199,0,255	0/0:34,0:36:0,107,255
+chr21	34282247	chr21:34282247:M	AAAAAAAAAAAAAAAGCAAAAAAACAGAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,44,255	0/1:9,8:18:88,0,107	0/0:10,1:15:0,22,191
+chr21	34301962	chr21:34301962:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:26:255,77,0	0/1:7,2:11:24,0,178	1/1:0,17:21:255,61,0
+chr21	34302299	chr21:34302299:M	TTTTTTTTTCTTTTTTTTTTTTTTCTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,17:19:255,37,0	0/1:8,12:21:146,0,86	1/1:1,23:25:255,55,0
+chr21	34317719	chr21:34317719:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,44:45:255,114,0	0/1:20,18:39:204,0,249	1/1:1,41:42:255,105,0
+chr21	34321893	chr21:34321893:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,3:17:4,0,204	0/1:9,6:15:60,0,110	0/1:9,7:16:77,0,112
+chr21	34324973	chr21:34324973:M	TATATATATATACACATATATAT	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,19:27:255,49,0	0/1:12,5:18:52,0,164	1/1:0,13:15:255,44,0
+chr21	34324995	chr21:34324995:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,3,20:30:255,255,225,78,38,0	1/2:1,8,8:22:255,70,37,66,0,63	2/2:0,5,14:22:255,185,122,64,6,0
+chr21	34333503	chr21:34333503:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:19:255,37,0	1/1:1,14:16:223,30,0	1/1:0,19:22:255,61,0
+chr21	34341186	chr21:34341186:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:12:151,14,0	0/1:5,8:15:111,0,42	0/1:4,12:16:162,0,23
+chr21	34341979	chr21:34341979:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:23:255,67,0	0/1:10,15:26:189,0,100	1/1:2,21:28:255,45,0
+chr21	34349071	chr21:34349071:M	TAAATAAATAAATAAATAAATAAATAAATAAATAA	<7.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:20,14:34:171,0,255	1/1:0,15:15:255,44,0	0/1:19,18:37:230,0,249
+chr21	34355694	chr21:34355694:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,30:31:255,73,0	1/1:0,24:25:255,73,0
+chr21	34357176	chr21:34357176:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:58,11,0	0/1:2,0:6:14,0,20	0/1:1,6:9:78,0,5
+chr21	34363026	chr21:34363026:M	AAAACAACAACAACAAACAAAAAC	<4.5>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:35,0:35:0,105,255	0/1:12,9:21:166,0,241	0/0:38,0:38:0,114,255
+chr21	34364773	chr21:34364773:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:31:255,72,0	0/1:10,12:23:143,0,116	1/1:0,19:19:255,56,0
+chr21	34368198	chr21:34368198:M	CACACACACACACACACACACACACACACACA	<17>	.	.	Motif=CA	GT:AD:DP:PL	0/0:13,1:14:0,27,137	0/0:13,0:13:0,35,145	0/1:7,3:10:7,0,52
+chr21	34368230	chr21:34368230:M	ATATATATATATATATATATATATATATATATGTATGTTATATATATGTATGTTATATATAT	<28>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,5:9:110,0,49	1/1:0,0:1:14,3,0	0/1:3,5:8:101,0,53
+chr21	34374051	chr21:34374051:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:12:80,0,53	0/1:10,3:14:10,0,137	0/1:5,8:13:99,0,47
+chr21	34393139	chr21:34393139:M	ACACACACACACACACACACACCGCACACACACACA	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,251	0/1:12,5:18:36,0,171	0/0:13,1:15:0,25,231
+chr21	34403368	chr21:34403368:M	AAAAAAAGAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:21:110,0,168	0/1:7,6:13:70,0,88	0/1:10,10:20:127,0,127
+chr21	34403832	chr21:34403832:M	TTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:11:132,0,107	0/1:5,7:12:154,0,103	0/1:8,15:23:255,0,155
+chr21	34414213	chr21:34414213:M	CACACACACGCGCACACACACACACACACACACACACACACACACACACA	<24>,<26>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,1,4:7:51,52,109,0,13,26	1/2:0,5,1:7:91,16,7,91,0,131	0/0:11,2,1:14:0,6,168,23,148,195
+chr21	34418470	chr21:34418470:M	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	<6.2>,<9.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/2:0,3,6:9:179,114,150,80,0,62	0/1:3,3,0:6:72,0,71,80,54,126	1/2:0,5,1:6:147,19,12,131,0,128
+chr21	34431453	chr21:34431453:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:28:129,0,240	0/1:11,15:26:196,0,120	0/1:8,8:16:103,0,101
+chr21	34439432	chr21:34439432:M	TGTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,7:14:89,0,88	0/1:5,5:11:59,0,58	0/1:6,8:14:105,0,67
+chr21	34444562	chr21:34444562:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,6,39	0/0:6,0:9:0,26,206	0/1:4,4:9:100,0,91
+chr21	34455183	chr21:34455183:M	AAAAAAAAAAAAAAAGAAACAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:88,0,21	0/1:3,11:17:145,0,5	0/1:2,5:10:59,0,22
+chr21	34469031	chr21:34469031:M	AAACAAACAAACAAACA	<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,9:9:252,27,0	0/1:10,8:18:172,0,228
+chr21	34477050	chr21:34477050:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,15:16:255,28,0	1/1:0,22:22:255,65,0	0/1:12,10:22:126,0,161
+chr21	34490963	chr21:34490963:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,255	0/0:14,0:14:0,41,252	0/1:12,9:21:106,0,161
+chr21	34491139	chr21:34491139:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:4:0,0,0	1/1:0,7:7:210,21,0	0/0:1,0:4:0,3,29
+chr21	34519363	chr21:34519363:M	TTTTCTTTTCTTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<53>,<54>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:12,15,41,0,18,12	1/2:0,3,6:9:161,85,76,50,0,25	2/2:0,0,5:6:76,79,88,6,15,0
+chr21	34522189	chr21:34522189:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,3:38:0,55,255	0/0:28,2:33:0,57,255	0/1:17,20:40:255,0,202
+chr21	34523785	chr21:34523785:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,37:37:255,109,0	0/1:25,19:44:221,0,255
+chr21	34527855	chr21:34527855:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:29:0,72,255	0/0:25,0:27:0,78,255	0/1:16,13:33:255,0,255
+chr21	34528956	chr21:34528956:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,2:46:0,98,255	0/0:46,2:48:0,106,255	0/1:21,23:45:255,0,255
+chr21	34532964	chr21:34532964:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,13,15:30:255,255,255,217,0,255	2/2:1,0,20:23:255,255,255,46,54,0	1/2:1,11,7:21:255,116,153,187,0,255
+chr21	34546374	chr21:34546374:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/1:30,12:43:81,0,255	0/0:38,3:41:0,67,255
+chr21	34556066	chr21:34556066:M	AAATAAATAAATAAATAAATAAATAAATAAATAATTAAA	<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:5,4:9:85,0,112	1/1:0,6:6:166,18,0	0/0:12,0:12:0,36,255
+chr21	34556109	chr21:34556109:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,58,0	1/1:1,7:9:112,9,0	1/1:1,15:17:255,32,0
+chr21	34556430	chr21:34556430:M	AATAATAATAATAATAATAATAATAATAATA	<11.3>,<12.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/2:13,0,12:25:255,227,255,0,244,255	0/0:19,0,0:20:0,58,255,59,255,255	1/2:0,10,8:20:255,159,103,169,0,140
+chr21	34563755	chr21:34563755:M	AAAAAAAAAAAAAAAAA	<13>,<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,6,2,4:16:247,71,107,82,57,76,108,0,39,75	2/3:0,0,3,0:5:69,31,50,1,18,6,25,22,0,16	1/3:0,4,0,3:7:155,49,37,67,27,48,76,0,36,56
+chr21	34563795	chr21:34563795:M	AGAGAGAGAGAGAGAGAGAGAGAGAG	<14>,<15>,<16>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,3,12,7:22:255,234,179,72,42,16,128,66,0,96	1/3:0,2,2,2:6:81,43,28,20,4,9,25,0,4,28	0/1:2,3,2,0:8:33,0,2,4,0,33,32,17,50,98
+chr21	34583179	chr21:34583179:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:62,0,88	0/0:16,2:19:0,21,248	1/1:0,18:19:255,53,0
+chr21	34601818	chr21:34601818:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,1:8:0,6,100	0/1:5,3:8:27,0,61	0/0:14,0:18:0,30,243
+chr21	34605922	chr21:34605922:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2,0:9:31,0,158,32,153,177	0/0:12,0,0:15:0,44,255,42,255,255	1/2:0,3,7:10:253,119,91,52,0,23
+chr21	34619211	chr21:34619211:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:41:0,120,255	0/0:38,1:41:0,100,255	0/1:18,20:39:255,0,214
+chr21	34625574	chr21:34625574:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:45:0,114,255	0/0:23,2:26:0,42,255	0/1:17,14:34:171,0,204
+chr21	34635885	chr21:34635885:M	TTTTTTTTTTTTTTTTTCTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,3:16:0,1,139	0/0:18,1:21:0,45,255	0/1:10,9:21:84,0,91
+chr21	34644138	chr21:34644138:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:61,40,34,6,6,0	1/2:0,1,3:5:118,58,46,17,0,2	1/2:0,4,1:5:140,17,2,67,0,53
+chr21	34664881	chr21:34664881:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:32:0,94,255	0/0:14,0:14:0,41,241	0/1:19,16:36:190,0,233
+chr21	34666297	chr21:34666297:M	TTATTTTATTTTTATTTTTTTT	<4.6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/0:44,2:47:0,92,255	0/1:11,23:34:255,0,152
+chr21	34671122	chr21:34671122:M	AAAAAAAAAAAAAAAAAAAAA	<14>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,2:8:56,72,159,0,72,56	2/2:0,0,6:8:161,173,195,21,21,0	0/1:4,10,0:17:255,0,89,255,89,255
+chr21	34675253	chr21:34675253:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1,0:12:0,17,182,35,185,208	0/1:12,4,0:16:22,0,160,68,172,255	0/2:7,1,3:11:21,35,157,0,87,102
+chr21	34678276	chr21:34678276:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:14:0,22,203	0/0:11,2:13:0,4,156	0/1:11,11:25:141,0,132
+chr21	34691553	chr21:34691553:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,232	1/1:1,35:37:255,81,0	0/1:13,22:38:255,0,146
+chr21	34693971	chr21:34693971:M	TTTTCTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,21:27:255,0,56	0/1:1,11:17:255,0,12	0/0:7,0:15:0,27,234
+chr21	34694136	chr21:34694136:M	TTTTTTTTTTTTTTTTT	<16>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,1,2:12:21,33,167,0,144,243	2/2:0,0,3:3:84,84,84,9,9,0	0/1:15,6,0:21:45,0,206,106,255,255
+chr21	34699416	chr21:34699416:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,2,9:19:128,90,241,0,68,63	1/2:2,6,12:21:255,134,164,73,0,50	0/2:4,2,3:9:48,10,102,0,34,43
+chr21	34700447	chr21:34700447:M	AAAAAAAAAAAAAAAAGAAAAGAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:20,0,97	1/1:0,3:3:84,9,0	0/0:5,0:6:0,18,157
+chr21	34707438	chr21:34707438:M	CACACACACACACACACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:12,11:23:239,0,255	1/1:0,36:36:255,108,0	0/0:29,0:32:0,93,255
+chr21	34711517	chr21:34711517:M	AAATAAACAAACAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<12>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	2/2:0,0,14:14:255,255,255,41,41,0	1/2:0,5,5:10:205,77,62,90,0,62	0/2:9,0,11:20:149,176,255,0,167,112
+chr21	34714685	chr21:34714685:M	AAAAAAACAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,0:10:0,29,167	0/0:13,0:16:0,46,255	0/1:5,6:11:76,0,57
+chr21	34716832	chr21:34716832:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:7,6:17:89,0,111	1/1:0,17:21:255,61,0	0/0:23,0:25:0,63,255
+chr21	34716863	chr21:34716863:M	CACACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,7:20:38,0,86	0/1:11,9:22:51,0,78	0/0:20,0:22:0,60,255
+chr21	34720274	chr21:34720274:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5,0:17:41,0,169,89,184,255	0/2:14,1,7:24:72,118,255,0,185,183	0/1:11,2,0:14:6,0,155,44,164,224
+chr21	34725632	chr21:34725632:M	TTTTTTTTTTGTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:18:19,0,131	1/1:1,18:20:231,40,0	0/0:24,0:24:0,68,255
+chr21	34739954	chr21:34739954:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,16:33:223,0,186	1/1:3,38:41:255,67,0	0/0:42,1:44:0,111,255
+chr21	34740525	chr21:34740525:M	ATCCATCCATCCATCCATCCATCCATCCACTCATCAATTTGCCCCATCGTCCATCCATCCATCCATCCATC	<18.8>	.	.	Motif=ATCC	GT:AD:DP:PL	0/1:2,6:8:89,0,14	0/0:3,0:3:0,9,53	0/0:10,0:10:0,29,184
+chr21	34747424	chr21:34747424:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10:22:117,0,153	0/1:13,14:30:178,0,140	0/0:20,1:23:0,49,255
+chr21	34748558	chr21:34748558:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGT	<24>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,8:16:91,0,89	0/1:12,8:20:73,0,138	0/0:19,0:21:0,61,255
+chr21	34753378	chr21:34753378:M	ACACACACACACACACACACAC	<12>,<13>	.	.	Motif=AC	GT:AD:DP:PL	0/2:5,1,8:16:114,68,85,0,41,63	0/1:12,7,1:20:27,0,67,46,108,238	0/0:24,0,0:28:0,70,255,80,255,255
+chr21	34753399	chr21:34753399:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<27.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:2,0:6:11,0,63	1/1:0,3:3:80,9,0	1/1:0,3:8:99,4,0
+chr21	34757755	chr21:34757755:M	TTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:5:128,127,127,15,15,0	1/2:0,7,2:11:255,65,41,198,0,188	2/2:0,0,5:5:163,163,162,15,15,0
+chr21	34764477	chr21:34764477:M	TCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,29:31:255,93,0	0/1:8,8:17:168,0,187	1/1:0,34:37:255,111,0
+chr21	34764606	chr21:34764606:M	AAATAAAATATAAATAAATAAATAAATAAATAAATACATTAAAAAAATAAA	<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,20:20:255,59,0	0/1:6,11:17:148,0,58	1/1:0,29:29:255,86,0
+chr21	34764702	chr21:34764702:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:6:66,0,0	0/0:2,0:3:0,9,47	0/1:2,0:5:14,0,23
+chr21	34767335	chr21:34767335:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:25:255,48,0	0/1:8,11:22:137,0,88	0/1:4,18:22:255,0,6
+chr21	34772764	chr21:34772764:M	CTTTCTTTCTTTC	<6.2>	.	.	Motif=CTTT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	0/1:24,15:39:255,0,255	1/1:0,38:39:255,117,0
+chr21	34773326	chr21:34773326:M	TGTGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,14:31:255,0,255	0/1:25,14:41:255,0,255	0/1:18,17:38:255,0,255
+chr21	34774464	chr21:34774464:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,7,15:28:255,255,255,166,0,104	0/1:6,6,0:16:127,0,139,135,147,255	1/2:0,9,11:23:255,255,255,206,0,164
+chr21	34776527	chr21:34776527:M	TTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:97,12,0	0/0:3,0:5:0,11,103	.
+chr21	34793707	chr21:34793707:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:222,0,185	0/1:13,11:26:139,0,153	0/1:25,5:30:3,0,255
+chr21	34804743	chr21:34804743:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:15:38,0,138	0/1:4,9:17:106,0,61	0/1:7,3:13:37,0,98
+chr21	34820645	chr21:34820645:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,15:28:202,0,140	0/0:30,0:31:0,91,255	0/1:13,11:26:123,0,176
+chr21	34823431	chr21:34823431:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,11:17:255,200,154,87,0,38	2/2:0,1,12:13:255,219,183,39,21,0	1/2:0,6,18:25:255,255,235,112,0,41
+chr21	34842493	chr21:34842493:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,17	0/1:2,4:6:47,0,15	1/1:0,1:3:36,8,0
+chr21	34844581	chr21:34844581:M	AATGAATGAGTGAGTGAGTGAATGAATGAATGA	<7.2>	.	.	Motif=AATG	GT:AD:DP:PL	0/1:7,9:20:110,0,74	0/1:16,21:38:242,0,156	0/0:24,0:24:0,70,255
+chr21	34847918	chr21:34847918:M	TTTTTTTTTTCTTCTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:35:193,0,252	0/1:17,17:34:199,0,200	0/0:41,0:41:0,121,255
+chr21	34850028	chr21:34850028:M	AACAACAACAACAA	<3.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:22,17:45:255,0,255	0/1:14,17:33:249,0,169	0/0:38,0:38:0,112,255
+chr21	34852170	chr21:34852170:M	AAAACAAAACAAAACAAAACAAAACAAAACAA	<5.4>,<7.4>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:7,16,0:23:243,0,68,255,116,255	1/2:0,18,13:31:255,231,255,255,0,255	0/2:13,0,18:32:248,255,255,0,211,157
+chr21	34853816	chr21:34853816:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,9:20:98,0,119	0/1:12,16:29:181,0,117	1/1:2,18:21:255,27,0
+chr21	34860519	chr21:34860519:M	GTGTGTCTGTGCGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,24:25:255,55,0	0/1:14,9:23:93,0,182	0/1:21,15:37:168,0,255
+chr21	34865275	chr21:34865275:M	TGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:5,0:6:0,18,156	0/0:3,0:5:0,9,88	1/1:0,3:4:84,9,0
+chr21	34871847	chr21:34871847:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:19:255,0,135	0/0:21,0:22:0,63,255	0/1:7,20:27:255,0,112
+chr21	34874124	chr21:34874124:M	TCTCTCTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:14,22:36:255,0,255	0/1:25,24:53:255,0,255	0/0:21,0:21:0,63,255
+chr21	34874678	chr21:34874678:M	AAAAAAAAAACAACAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,16:29:214,0,158	0/1:15,13:28:148,0,183	0/0:32,0:33:0,97,255
+chr21	34876851	chr21:34876851:M	TTTCTTTTTCTTTTTTCTTTTT	<2.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:11,21:32:255,0,214	0/1:21,20:41:255,0,255	0/0:41,0:41:0,123,255
+chr21	34878345	chr21:34878345:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10,0:20:108,0,81,162,114,255	1/2:3,12,5:20:158,36,83,139,0,255	0/0:13,2,0:17:0,4,155,44,164,222
+chr21	34878361	chr21:34878361:M	ATATATATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:30,0:32:0,95,255	0/0:23,0:26:0,76,255	0/1:11,7:22:137,0,232
+chr21	34882691	chr21:34882691:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,31:46:255,0,255	0/1:15,23:42:255,0,255	0/0:32,2:34:0,37,255
+chr21	34894881	chr21:34894881:M	ACACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,3,1:4:103,25,17,78,0,75	0/1:10,8,0:19:191,0,238,221,255,255	0/2:4,0,4:9:88,105,222,0,106,89
+chr21	34909589	chr21:34909589:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,2:13:0,4,148	0/0:7,0:8:0,21,116	0/1:3,3:6:33,0,33
+chr21	34928962	chr21:34928962:M	GGGGGGGGGGG	<13>	.	.	Motif=G	GT:AD:DP:PL	1/1:2,12:21:255,10,0	1/1:1,9:14:225,16,0	0/1:3,14:20:255,0,17
+chr21	34937321	chr21:34937321:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,3,3:9:65,7,35,0,8,67	0/1:5,3,2:10:43,0,56,9,50,127	0/1:4,6,0:11:75,0,40,78,60,177
+chr21	34964488	chr21:34964488:M	AAAAAAAAAAAAAAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:6,7:14:82,0,65	0/1:14,10:24:105,0,178
+chr21	34971505	chr21:34971505:M	CCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACCACCATC	<12>,<14>	.	.	Motif=CCAT	GT:AD:DP:PL	0/0:20,0,0:20:0,59,255,59,255,255	0/1:5,11,0:16:151,0,43,194,77,255	0/2:13,0,9:23:101,165,255,0,216,188
+chr21	34976129	chr21:34976129:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:38:255,0,155	0/0:32,2:35:0,67,255	0/1:17,20:39:255,0,192
+chr21	34978924	chr21:34978924:M	ACACACACACAGATACACACACACACACACACACACACACACACACACACACACACA	<29.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6,0:7:101,18,0,106,6,163	2/2:0,0,6:8:204,188,180,24,21,0	0/1:1,4,0:7:51,0,2,65,17,132
+chr21	34982398	chr21:34982398:M	GTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,16:17:255,51,0	1/1:0,25:29:255,83,0	1/1:0,22:22:255,66,0
+chr21	34985868	chr21:34985868:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:14,3,0	0/1:0,0:2:0,0,0	1/1:0,4:5:126,15,0
+chr21	34991545	chr21:34991545:M	GATGATGATGATGATGATGATGATGATGATGGTGATGATGA	<12.7>	.	.	Motif=GAT	GT:AD:DP:PL	1/1:1,27:30:255,66,0	1/1:0,21:21:255,62,0	1/1:0,27:29:255,85,0
+chr21	34992675	chr21:34992675:M	AAAAAAAAAAAAAAGAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:20:196,0,50	0/1:12,11:25:128,0,143	1/1:1,22:26:255,58,0
+chr21	34995436	chr21:34995436:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,89	0/0:1,0:3:0,5,27	0/1:1,3:6:48,0,3
+chr21	35001309	chr21:35001309:M	TATATATATATATATATATATATATA	<8>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,26,17:44:255,255,255,255,0,255	1/2:0,23,9:33:255,157,173,255,0,255	1/1:1,32,0:33:255,69,0,255,87,255
+chr21	35002383	chr21:35002383:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTTATTTATTTATTTA	<13.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,8:10:236,24,0	1/1:0,1:2:27,3,0	1/1:0,10:10:255,30,0
+chr21	35022896	chr21:35022896:M	AATAATAATAATAATAATAATAATAA	<12.7>,<13.7>,<14.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/3:0,7,1,4:12:255,114,89,193,59,160,197,0,116,180	2/3:0,0,3,3:6:169,136,126,54,54,37,54,46,0,37	1/2:0,13,5,0:19:255,94,38,251,0,200,255,80,250,255
+chr21	35033123	chr21:35033123:M	TCATTCATTCATTCATTCA	<5.8>	.	.	Motif=TCAT	GT:AD:DP:PL	0/1:24,15:39:174,0,255	1/1:1,26:27:255,61,0	0/1:26,24:50:255,0,255
+chr21	35037925	chr21:35037925:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:1,19:22:255,47,0	1/1:2,25:28:255,46,0
+chr21	35038573	chr21:35038573:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<12>,<13>,<18>	.	.	Motif=CT	GT:AD:DP:PL	2/3:2,2,3,3:11:136,44,81,25,56,61,70,19,0,109	1/2:0,12,2,0:17:255,54,4,127,0,77,255,54,127,255	1/3:0,6,0,8:20:255,220,206,255,220,255,191,0,70,161
+chr21	35038614	chr21:35038614:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<21>,<24>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,3,8,5:20:255,184,155,131,97,106,230,38,0,227	1/2:0,5,12,0:17:255,130,80,58,0,7,255,130,58,255	1/2:1,7,8,2:19:255,67,45,55,0,33,255,40,30,255
+chr21	35038647	chr21:35038647:M	GAGATAGAGAGAGAGAGAGAGAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/0:17,4:22:0,8,185	0/0:27,0:27:0,76,255	0/1:14,14:30:112,0,112
+chr21	35040772	chr21:35040772:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:28,6,0	.	1/1:0,3:4:59,11,0
+chr21	35047515	chr21:35047515:M	ACACACACACACACACACACACACACACACACACACACACACACACAC	<18>,<19>,<20>,<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	3/4:0,2,4,8,8,2:25:255,255,255,203,201,167,99,64,47,48,132,49,8,0,76,255,167,82,39,104,242	1/4:0,6,0,2,2,1:12:255,78,55,122,48,93,144,8,78,117,175,0,68,114,156,210,26,83,122,163,196	2/5:0,1,4,3,0,5:14:255,154,158,101,105,99,115,81,66,91,152,75,45,75,120,150,45,0,25,97,126
+chr21	35047562	chr21:35047562:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<16.5>,<20.5>,<25.5>	.	.	Motif=CT	GT:AD:DP:PL	0/2:6,0,4,0:12:28,57,176,0,78,93,64,201,126,255	2/3:2,0,5,4:12:128,151,244,70,99,81,46,149,0,167	0/1:2,6,0,0:11:84,0,5,115,32,236,116,38,248,255
+chr21	35049396	chr21:35049396:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,97,255	0/1:17,14:33:155,0,227	0/0:38,1:40:0,99,255
+chr21	35049986	chr21:35049986:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,10,0,6:17:255,159,129,255,106,255,255,0,255,255	1/1:0,24,0,0:24:255,72,0,255,72,255,255,72,255,255	2/3:3,0,5,5:13:140,165,255,34,87,50,21,115,0,86
+chr21	35060265	chr21:35060265:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,22:41:255,0,243	0/1:14,19:34:241,0,162	0/1:20,21:41:255,0,252
+chr21	35064790	chr21:35064790:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,19:43:233,0,255	0/1:16,22:40:255,0,169	0/1:18,23:41:255,0,212
+chr21	35072210	chr21:35072210:M	CTCTCTCTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:11,16:27:203,0,115	0/0:27,1:28:0,64,255
+chr21	35076743	chr21:35076743:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,15,0:22:255,0,96,255,140,255	0/2:6,0,11:20:255,255,255,0,168,129	0/1:7,16,0:26:255,0,131,255,184,255
+chr21	35079563	chr21:35079563:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:4:0,0,22	0/1:2,4:9:39,0,7	0/1:3,2:6:15,0,17
+chr21	35079739	chr21:35079739:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:83,0,110	0/1:9,8:17:90,0,108	0/1:19,12:34:127,0,255
+chr21	35083042	chr21:35083042:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:16,0,38	1/1:0,3:6:52,10,0	0/1:3,3:7:31,0,43
+chr21	35084547	chr21:35084547:M	TATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,11:40:76,0,249	1/1:0,13:16:212,45,0	0/1:16,17:37:157,0,143
+chr21	35086386	chr21:35086386:M	CACACATACACACACACACACACACACACACACACACACA	<18>,<23>	.	.	Motif=CA	GT:AD:DP:PL	0/2:14,0,6:22:106,148,255,0,255,255	1/2:0,9,7:17:255,180,150,241,0,225	0/2:10,0,8:19:188,218,255,0,255,238
+chr21	35093006	chr21:35093006:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:12,17:31:255,0,255	1/1:0,13:18:255,39,0	0/1:13,19:34:255,0,255
+chr21	35099863	chr21:35099863:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,31:52:255,0,246	0/0:36,1:39:0,93,255	0/1:21,25:46:255,0,253
+chr21	35102904	chr21:35102904:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,4:6:67,81,129,0,16,1	1/2:0,8,0:13:140,25,3,138,0,216	0/1:4,1,0:5:3,0,56,18,59,86
+chr21	35105835	chr21:35105835:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,2:12:255,38,25,222,0,210	1/1:0,6,0:8:205,24,0,182,18,173	0/2:5,0,7:13:96,121,255,0,84,49
+chr21	35106755	chr21:35106755:M	CCAGCCCAGCCCAGCCCAGCCCAGCCCAGCACAGCACAGCACAGCCCTGCCCAG	<11.8>	.	.	Motif=CCAGC	GT:AD:DP:PL	0/1:9,7:16:86,0,124	0/1:12,10:22:115,0,151	0/0:19,0:19:0,56,255
+chr21	35114655	chr21:35114655:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:33:0,90,255	0/1:17,10:34:42,0,122	0/0:30,1:31:0,73,255
+chr21	35116447	chr21:35116447:M	GTGTGTGTGTGTGT	<6>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,33:52:255,0,208	0/0:8,0:8:0,24,143	1/1:0,51:51:255,150,0
+chr21	35116460	chr21:35116460:M	TATATATATATAT	<5.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:51,0:51:0,145,255	0/1:8,13:22:117,0,57	0/0:54,2:56:0,131,255
+chr21	35123994	chr21:35123994:M	AAAAAAAAAAAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:34:255,0,157	0/0:31,1:36:0,86,255	1/1:3,31:39:255,34,0
+chr21	35126441	chr21:35126441:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,20:45:253,0,255	0/1:17,17:34:209,0,209	1/1:0,39:39:255,115,0
+chr21	35127742	chr21:35127742:M	ATATATATATATATAT	<9>,<10>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,23,0:39:255,0,195,255,255,255	0/0:38,0,0:38:0,112,255,114,255,255	1/2:0,19,11:30:255,208,121,255,0,255
+chr21	35132879	chr21:35132879:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,2:7:37,0,65	0/0:1,0:1:0,3,25	1/1:0,8:12:234,29,0
+chr21	35134159	chr21:35134159:M	GTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<28>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:19:0,57,255	0/1:5,2:8:32,0,124	0/1:2,3:5:65,0,39
+chr21	35137864	chr21:35137864:M	TTTATTTATTTATTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:11,12:23:255,0,228	0/0:37,0:37:0,111,255
+chr21	35138383	chr21:35138383:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,6,0:19:255,93,54,235,0,182,255,109,236,255	2/3:0,0,19,10:30:255,255,255,255,255,224,255,255,0,255	1/1:0,39,0,0:41:255,123,0,255,120,255,255,123,255,255
+chr21	35139452	chr21:35139452:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:21:0,54,255	0/1:18,25:48:255,0,255	0/0:38,0:43:0,122,255
+chr21	35140180	chr21:35140180:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,3:8:28,52,212,0,86,63	0/1:2,10,1:14:247,0,32,239,16,255	0/2:5,0,2:8:11,34,191,0,92,72
+chr21	35141273	chr21:35141273:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,2:21:0,24,255	0/1:9,9:19:110,0,102	0/0:15,1:17:0,32,255
+chr21	35153190	chr21:35153190:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:7:14,0,66	0/0:9,1:12:0,18,151	0/1:13,5:18:33,0,170
+chr21	35154687	chr21:35154687:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:17,7:24:118,0,255	0/1:13,12:28:255,0,255
+chr21	35156060	chr21:35156060:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,70,255	0/1:5,4:9:25,0,38	0/0:15,0:15:0,42,190
+chr21	35158843	chr21:35158843:M	CAAAAAACAAACAAACAAACAAACAAACAAA	<5.8>	.	.	Motif=CAAA	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:23,18:42:255,0,255	0/0:27,0:30:0,81,255
+chr21	35166279	chr21:35166279:M	GAAGGAGGGAGGGAGGGAAGGAAGGGGGAAGGGAAGAAAGAAAGAAGGAACGAAGGAAGGAAGGAA	<8.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:11,4:15:54,0,238	0/0:18,0:19:0,44,255	0/1:12,3:19:58,0,255
+chr21	35188926	chr21:35188926:M	AAAAAAAGAAAAAAAAAGAGAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:25,0:25:0,74,255	0/1:15,11:26:130,0,204
+chr21	35188980	chr21:35188980:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,2:43:0,89,255	0/0:30,0:30:0,88,255	0/1:19,13:32:149,0,255
+chr21	35189009	chr21:35189009:M	ACACACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,16:42:91,0,169	0/1:10,15:30:107,0,73	0/1:13,14:36:80,0,112
+chr21	35199034	chr21:35199034:M	ACACACACACACACACACACACACACACACACACA	<13.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:20,0,0:20:0,60,255,60,255,255	0/2:16,0,13:29:255,255,255,0,255,255	0/1:11,10,0:22:245,0,255,255,255,255
+chr21	35205674	chr21:35205674:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<18.5>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/2:6,0,6:15:128,157,255,0,184,164	0/0:10,0,0:10:0,30,255,30,255,255	1/2:0,8,4:12:255,99,77,217,0,205
+chr21	35211072	chr21:35211072:M	ACAAACAAACAAACAAACAAACAAACAAACAAAAAAC	<10.2>	.	.	Motif=ACAA	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/0:28,0:29:0,85,255	0/1:22,15:37:173,0,255
+chr21	35216611	chr21:35216611:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:43,1:45:0,114,255	0/1:22,18:40:210,0,255
+chr21	35224602	chr21:35224602:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:13,1:14:0,24,203	0/1:11,14:25:171,0,119
+chr21	35230373	chr21:35230373:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/0:15,0:18:0,45,255	0/1:12,8:24:142,0,255
+chr21	35232459	chr21:35232459:M	TGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:14,9:23:90,0,178	0/1:17,14:31:162,0,217
+chr21	35236635	chr21:35236635:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,6:18:114,0,141	0/1:15,2:21:3,0,255	0/1:4,7:16:167,0,54
+chr21	35240430	chr21:35240430:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,5,7:21:67,27,177,0,27,135	0/2:16,0,10:26:93,165,255,0,227,197	0/1:14,12,0:27:139,0,165,211,204,255
+chr21	35247362	chr21:35247362:M	TAATAATAATAATAATAATAATAATAATAATAATAA	<11>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/0:11,0:11:0,32,197	0/1:13,12:25:149,0,167
+chr21	35254535	chr21:35254535:M	GTGTGTGTGTGTGTGTGCGTGTGTGTGCTTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/0:22,0:22:0,65,255	0/1:12,13:26:165,0,153
+chr21	35264890	chr21:35264890:M	TTTTTGTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:15:0,41,251	0/0:12,1:13:0,21,187	0/1:9,9:19:101,0,110
+chr21	35265062	chr21:35265062:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:29:0,82,255	0/0:15,0:18:0,45,255	0/1:14,13:28:255,0,255
+chr21	35266369	chr21:35266369:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:17:255,32,0	1/1:1,22:23:255,50,0	0/1:9,8:17:93,0,111
+chr21	35271394	chr21:35271394:M	AAAAAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,34,0:55:255,0,228,255,255,255	0/1:20,22,0:44:255,0,222,255,255,255	0/2:19,0,12:34:255,255,255,0,255,255
+chr21	35279809	chr21:35279809:M	AACAACAACAACAACAACAACAACAACAACAACAA	<12.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:21,0:21:0,62,255	0/1:21,11:32:112,0,255
+chr21	35282442	chr21:35282442:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,30,0:33:255,96,0,255,96,255	1/1:0,25,0:25:255,75,0,255,75,255	1/2:0,14,6:21:255,166,126,255,0,255
+chr21	35287880	chr21:35287880:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:1,24:26:255,59,0	1/1:1,26:29:255,65,0
+chr21	35297316	chr21:35297316:M	CACACACACACACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,12:12:255,36,0	0/1:1,4:7:97,0,26	1/1:0,16:17:255,51,0
+chr21	35301722	chr21:35301722:M	AAAAAAAAAAAAAAAAAAGAAAA	<22>,<31>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,8,2:16:122,29,22,96,0,229	0/1:8,3,0:15:24,0,66,49,93,255	1/2:0,8,5:13:200,120,97,102,0,175
+chr21	35305131	chr21:35305131:M	TGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG	<14>,<15>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,20,23,0:43:255,255,255,255,0,255,255,255,255,255	1/3:1,17,0,14:32:255,234,255,255,255,255,255,0,255,255	2/2:0,1,32,0:33:255,255,255,97,79,0,255,255,99,255
+chr21	35307408	chr21:35307408:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:191,33,0	1/1:0,4:4:66,12,0	1/1:0,15:15:254,44,0
+chr21	35314220	chr21:35314220:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,7:9:96,0,9	0/1:5,3:8:27,0,61	0/1:5,8:14:106,0,46
+chr21	35348646	chr21:35348646:M	ATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCT	<16>	.	.	Motif=ATTCT	GT:AD:DP:PL	.	1/1:0,4:4:98,12,0	.
+chr21	35360149	chr21:35360149:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCTCTCTTCTCT	<29>,<32>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,11,7:18:255,184,151,255,0,255	2/2:0,0,14:15:255,255,255,45,45,0	1/1:0,23,0:23:255,69,0,255,69,255
+chr21	35362489	chr21:35362489:M	TGTTTTGTTTTTGTTTTTTTTTTTTG	<5.4>	.	.	Motif=TGTTT	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:0,27:27:255,80,0	1/1:4,28:33:255,22,0
+chr21	35371185	chr21:35371185:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,17:34:255,255,231,222,0,194	0/2:27,0,19:47:255,255,255,0,255,255	1/1:2,31,2:35:255,66,0,255,66,255
+chr21	35376223	chr21:35376223:M	TTTTTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23,0:25:255,74,0,255,74,255	0/1:6,12,0:22:255,0,113,255,110,255	1/2:1,13,8:23:255,120,180,255,0,255
+chr21	35382541	chr21:35382541:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,13:32:144,0,254	0/1:15,8:25:66,0,206	0/0:28,3:31:0,38,255
+chr21	35385951	chr21:35385951:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:39:220,0,248	0/1:23,14:38:140,0,255	0/0:37,0:37:0,109,255
+chr21	35393207	chr21:35393207:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,6:21:24,0,110	1/1:1,11:15:110,10,0	0/0:14,0:17:0,40,184
+chr21	35395417	chr21:35395417:M	TATATATACATATATATATGTATATATATATATATATATATGTATATATATATATAT	<31.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,6:10:116,47,38,70,0,65	.	.
+chr21	35395473	chr21:35395473:M	TTTTTTTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,6:10:234,137,120,67,0,43	0/2:0,0,2:3:51,46,55,0,14,8	1/2:0,2,1:3:79,22,15,46,0,39
+chr21	35395628	chr21:35395628:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,6:19:16,0,255	0/0:10,0:10:0,30,255	0/0:17,0:17:0,51,255
+chr21	35401192	chr21:35401192:M	TTCTTTTTCATTTTCTTTTTTTTTTTTTT	<4.7>,<5>	.	.	Motif=TTCTTT	GT:AD:DP:PL	1/2:0,4,9:13:227,175,201,79,0,71	0/2:13,1,7:23:82,109,255,0,202,213	0/1:18,15,0:34:216,0,255,255,255,255
+chr21	35403024	chr21:35403024:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<20.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,2,9,0:11:255,154,123,35,0,2,255,155,35,255	1/1:0,11,0,0:13:255,33,0,212,32,181,255,33,212,255	2/3:0,0,6,6:13:255,255,255,182,181,164,165,101,0,150
+chr21	35409715	chr21:35409715:M	CACACACACACACACACACA	<11>,<12>	.	.	Motif=CA	GT:AD:DP:PL	1/2:1,13,18:32:255,255,252,194,0,166	1/1:0,30,0:30:255,88,0,255,88,255	1/2:1,22,21:44:255,255,255,255,0,255
+chr21	35413203	chr21:35413203:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,9,0:12:169,120,140,18,0,1,197,162,34,255	2/3:0,0,6,3:9:129,137,172,51,83,63,102,102,0,152	0/1:8,6,2,0:16:137,0,197,75,110,171,169,146,194,255
+chr21	35414094	chr21:35414094:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,9:13:140,3,0	0/1:3,8:11:100,0,17	0/1:8,8:18:83,0,101
+chr21	35426247	chr21:35426247:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,26:28:255,46,0	1/1:3,28:31:255,38,0	1/1:1,32:34:255,72,0
+chr21	35429428	chr21:35429428:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,5:9:136,58,75,35,0,27	1/2:2,2,4:9:90,24,66,16,0,24	1/1:0,4,1:7:149,18,0,92,3,77
+chr21	35430398	chr21:35430398:M	TTCCTTCCTTTCTCCTTCCTTCCTTCCTTCC	<6.8>	.	.	Motif=TTCC	GT:AD:DP:PL	0/0:45,0:45:0,133,255	0/1:13,5:18:38,0,181	0/0:37,0:37:0,109,255
+chr21	35435661	chr21:35435661:M	TTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,12,0:12:255,228,195,36,35,0,228,195,35,195	0/1:12,5,2,0:20:44,0,142,34,165,255,79,192,255,255	2/3:1,0,3,6:10:226,186,183,71,86,69,23,30,0,23
+chr21	35437242	chr21:35437242:M	TTTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,3:12:255,50,16,152,0,120	0/1:7,5,0:14:108,0,164,88,177,249	0/1:4,4,0:10:79,0,98,66,108,163
+chr21	35438215	chr21:35438215:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,115,0	0/1:19,22:42:255,0,225	0/1:23,17:41:193,0,255
+chr21	35440714	chr21:35440714:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,153	0/0:6,0:6:0,18,102	0/1:6,4:10:41,0,76
+chr21	35443412	chr21:35443412:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:45:255,135,0	0/1:2,16:26:255,0,43	0/1:2,18:26:255,0,19
+chr21	35446085	chr21:35446085:M	ATATATATATATATATATATATATATATAT	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17,0:22:255,58,0,255,60,255	0/1:3,3,0:6:24,0,24,35,10,54	1/2:0,6,11:20:83,35,169,75,0,86
+chr21	35446114	chr21:35446114:M	TTTTTTTTTTTTTTTT	<11>,<15>,<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:1,0,13,9,0:24:242,255,255,116,229,175,176,255,0,255,255,255,231,255,255	1/3:0,4,2,3,0:9:118,20,74,103,24,125,89,0,62,99,132,85,136,112,197	2/4:0,0,6,0,4:12:179,183,255,108,96,89,196,250,108,254,88,157,0,155,158
+chr21	35463310	chr21:35463310:M	ACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:21,13:36:211,0,255	0/1:25,18:44:255,0,255	0/1:4,25:33:255,0,10
+chr21	35467967	chr21:35467967:M	CTCCTTCTCCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTC	<12.3>	.	.	Motif=CTC	GT:AD:DP:PL	0/1:7,10:17:137,0,81	0/1:11,13:24:159,0,124	0/0:32,0:32:0,94,255
+chr21	35480819	chr21:35480819:M	ATATATTATATATATATATA	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,15:32:195,0,231	0/1:20,11:32:106,0,255	1/1:2,29:31:255,54,0
+chr21	35505020	chr21:35505020:M	TTTTTTTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,5:22:27,0,217	0/1:10,5:15:42,0,128	0/0:27,1:32:0,74,255
+chr21	35507159	chr21:35507159:M	CACACACACACACACACACACACACACACACACACACACACACACACAC	<18.5>,<19.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,1,23:24:255,255,255,72,53,0	1/2:0,13,5:21:255,95,36,237,0,183	1/2:0,13,13:26:255,226,151,225,0,151
+chr21	35512066	chr21:35512066:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:26:255,76,0	1/1:1,25:26:255,59,0	1/1:0,19:20:255,58,0
+chr21	35512864	chr21:35512864:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:192,21,0	1/1:0,4:6:119,13,0	1/1:0,2:3:60,6,0
+chr21	35517123	chr21:35517123:M	AAAAAAAAAAGAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:21,18:40:205,0,255	0/0:44,0:44:0,130,255
+chr21	35519353	chr21:35519353:M	CACACACACACACACACACACACACACACACACA	<20>,<22>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,15:19:255,255,255,56,48,0	2/2:0,0,20:24:255,255,255,71,63,0	1/2:0,10,12:24:255,255,255,255,0,223
+chr21	35522517	chr21:35522517:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,19:51:255,0,255	0/1:15,16:34:255,0,255	0/0:39,0:43:0,120,255
+chr21	35526670	chr21:35526670:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,6:9:238,102,76,51,0,25	0/1:4,6,0:10:138,0,82,97,102,186	0/2:8,0,7:15:160,116,255,0,206,192
+chr21	35526746	chr21:35526746:M	ATATATATATATAATATATAATATATTATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,10:10:119,27,0	.	1/1:0,1:1:12,3,0
+chr21	35526825	chr21:35526825:M	ACACACACACACACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,2:17:4,0,255	0/1:5,3:9:52,0,115	0/0:14,0:14:0,42,255
+chr21	35526925	chr21:35526925:M	ATATATAGATATAGATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,10:27:31,0,255	0/0:8,0:8:0,24,207	0/0:17,1:19:0,45,255
+chr21	35526949	chr21:35526949:M	ACACACACACACACACACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:14,0:20:0,17,255	1/1:0,7:13:171,25,0	0/0:20,0:20:0,60,255
+chr21	35535564	chr21:35535564:M	AAAAAGAAAGAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:34:0,92,255	0/0:21,1:22:0,47,255	0/1:21,8:30:57,0,255
+chr21	35536843	chr21:35536843:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,119	0/1:7,3:11:17,0,94	0/0:5,1:8:0,4,80
+chr21	35553026	chr21:35553026:M	AAAAAGAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,20:49:255,0,255	0/1:13,17:32:255,0,255	1/1:0,58:61:255,182,0
+chr21	35558605	chr21:35558605:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,9,53	0/0:5,0:7:0,18,95	1/1:1,6:7:85,3,0
+chr21	35578256	chr21:35578256:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,3:43:0,73,255	0/0:33,3:38:0,60,255	0/1:19,27:47:255,0,193
+chr21	35589667	chr21:35589667:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,11:13:161,2,0	1/1:1,15:19:255,37,0	0/1:4,9:14:117,0,39
+chr21	35599704	chr21:35599704:M	GAGGAGGAGGAGGAGGAG	<7>	.	.	Motif=GAG	GT:AD:DP:PL	0/1:18,21:40:255,0,239	0/1:19,21:40:255,0,228	0/0:38,0:38:0,112,255
+chr21	35605494	chr21:35605494:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,22:35:255,0,119	0/1:22,17:41:187,0,255	1/1:0,41:41:255,121,0
+chr21	35610052	chr21:35610052:M	TATATATATATATATATATATATA	<11>,<13>	.	.	Motif=TA	GT:AD:DP:PL	0/2:13,1,9:23:99,146,255,0,184,181	1/2:0,15,3:20:255,59,36,255,0,255	0/1:8,17,0:25:233,0,71,255,122,255
+chr21	35622140	chr21:35622140:M	ATATATATATATATATATATATA	<9.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,8,6:19:209,93,146,134,0,204	1/1:0,7,0:7:140,21,0,156,21,196	2/2:1,0,5:8:97,116,174,1,21,0
+chr21	35622162	chr21:35622162:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<17>,<25>	.	.	Motif=AG	GT:AD:DP:PL	0/2:1,0,5:11:82,100,171,0,23,2	1/1:0,3,0:5:88,9,0,88,9,88	0/2:2,0,5:7:79,97,186,0,39,19
+chr21	35622263	chr21:35622263:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,14:24:189,0,104	0/1:9,8:19:95,0,112	0/0:20,0:21:0,61,255
+chr21	35629473	chr21:35629473:M	AAAAAAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,16,11:31:255,213,129,255,0,218	1/2:0,15,9:25:255,152,80,255,0,194	2/2:0,3,25:29:255,255,255,86,32,0
+chr21	35630479	chr21:35630479:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGCGTGTGTGTGT	<25>,<26>,<29>	.	.	Motif=GT	GT:AD:DP:PL	1/3:2,7,0,12:22:255,166,255,255,255,255,158,0,125,151	1/3:1,8,0,2:12:230,16,36,152,61,174,207,0,136,214	1/2:0,8,10,0:21:255,163,104,161,0,106,255,164,161,255
+chr21	35630813	chr21:35630813:M	ACACACACATACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,32:35:255,96,0	1/1:1,31:37:255,72,0	1/1:0,33:35:255,99,0
+chr21	35642006	chr21:35642006:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:21:191,0,242	0/1:15,12:30:237,0,255	0/1:14,13:30:255,0,255
+chr21	35647614	chr21:35647614:M	TTTTTCTTTTTTTTTCCTGTTTTCTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:15:255,42,0	1/1:0,11:13:255,38,0	1/1:0,14:16:255,47,0
+chr21	35650174	chr21:35650174:M	AAATAAATAAATAAATAAATAAATA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,26:26:255,77,0	1/1:0,43:43:255,127,0
+chr21	35654188	chr21:35654188:M	CACACACACACACACACACACACACACACACACACACACACA	<19>,<20>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,17,0:19:255,56,0,255,55,255	1/1:0,16,0:18:255,53,0,255,52,255	1/2:1,9,7:18:255,84,80,143,0,113
+chr21	35655703	chr21:35655703:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:18:255,52,0	1/1:0,21:21:255,62,0	1/1:2,27:30:255,52,0
+chr21	35660079	chr21:35660079:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:10:79,0,104	0/1:2,2:4:41,0,41	0/1:2,4:8:98,0,32
+chr21	35671189	chr21:35671189:M	TTTTTTTTTTTTTTTTTTTTTTT	<12>,<27>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,8:15:223,235,255,0,90,57	0/2:1,0,5:10:153,160,198,0,38,14	1/1:2,17,0:19:255,3,0,255,51,255
+chr21	35674619	chr21:35674619:M	TTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTTGTTGTT	<11.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:18,12:32:173,0,255	0/1:16,20:37:255,0,236	0/0:32,3:36:0,39,255
+chr21	35675592	chr21:35675592:M	CCCCCCCCCCCCCC	<13>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,3:4:63,12,0	0/0:1,0:1:0,3,16	0/0:1,0:1:0,3,17
+chr21	35680545	chr21:35680545:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/0:45,0:46:0,135,255	0/1:19,22:43:255,0,229
+chr21	35699740	chr21:35699740:M	ACACACACACACACACACACACACACACACACACACAC	<15>,<17>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,15,11:26:255,255,236,255,0,255	1/2:0,16,10:29:255,254,210,255,0,255	2/2:0,0,24:26:255,255,255,78,72,0
+chr21	35704557	chr21:35704557:M	AGAGAGAGAGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:20,11:33:179,0,255	0/1:12,12:25:222,0,233	0/0:37,0:37:0,111,255
+chr21	35704577	chr21:35704577:M	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<7.5>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:14,8:22:48,0,132	1/1:1,17:18:215,37,0	0/0:27,0:27:0,76,255
+chr21	35704663	chr21:35704663:M	AGAGAAAGAAGAAAGAAAAAGAAAGGAATGAAAGAAAGAGAAAGGGAACGAAAGAAAGGAAAAAGAGATAGAAAAGAGAGACAGAGACAGAGA	<7.3>	.	.	Motif=AGAGAA	GT:AD:DP:PL	1/1:0,4:4:135,12,0	1/1:0,2:2:65,6,0	1/1:0,1:1:35,3,0
+chr21	35704814	chr21:35704814:M	GAAGGAAGGAAGAAAGGAAGGAAGGAAGGAAGAAAGG	<10.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:14,3:17:8,0,215	0/1:11,7:18:74,0,143	0/0:26,0:26:0,77,255
+chr21	35704888	chr21:35704888:M	GAAAGAAAGAGAAAAGAGAAGGAAAGAGAGAGAGACAGACAGAAAAGAAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAAGGAAGAAAG	<20.2>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:1,1:2:12,0,13	0/0:2,0:2:0,6,37	1/1:0,4:4:72,12,0
+chr21	35708251	chr21:35708251:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,14,0:30:255,0,255,237,255,255	0/1:15,15,1:37:255,0,255,255,255,255	0/2:9,0,15:25:255,255,255,0,235,184
+chr21	35711660	chr21:35711660:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,20:25:255,0,18	0/1:7,14:21:181,0,59	0/1:9,6:19:79,0,115
+chr21	35714726	chr21:35714726:M	TGAGGTGAGGTGAGGTGAGGGAGG	<6.8>	.	.	Motif=TGAGG	GT:AD:DP:PL	0/1:17,13:30:255,0,255	0/1:22,12:35:228,0,255	0/1:9,16:25:255,0,175
+chr21	35719552	chr21:35719552:M	TTTTTTGTTTTTGTTTTTGTTTTTGTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:37:255,0,255	0/1:10,20:30:255,0,185	0/0:38,0:38:0,114,255
+chr21	35730163	chr21:35730163:M	TTTTTTTTTGTTTTGGTTTGGTTTGGTTTTTGGTTTTTGATTTTTGTTTTTTTTTTTTGTTTTTTTT	<15>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:5,4:10:87,0,95	0/1:3,6:9:128,0,47	0/1:4,10:15:213,0,67
+chr21	35739972	chr21:35739972:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:61,0,87	0/1:5,13:18:167,0,32	0/1:9,5:16:41,0,128
+chr21	35744789	chr21:35744789:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,8:17:174,0,146	1/1:0,8:9:229,27,0	0/0:14,0:16:0,47,255
+chr21	35768210	chr21:35768210:M	GAGAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGA	<25>	.	.	Motif=GA	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:8,8:16:166,0,169	0/0:22,0:22:0,66,255
+chr21	35782884	chr21:35782884:M	AAATAAATAAATAAAATAAACAATAAATAACAAATAAATAAATAAAATAAACAAATAAA	<16.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,15:15:255,45,0	1/1:0,5:5:122,15,0	1/1:0,9:9:223,27,0
+chr21	35788663	chr21:35788663:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,99,0	1/1:0,32:32:255,96,0	1/1:0,29:29:255,87,0
+chr21	35793298	chr21:35793298:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:39,0,5	0/1:1,4:5:50,0,2	0/1:1,2:3:24,0,8
+chr21	35816065	chr21:35816065:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30:31:255,91,0	1/1:1,34:36:255,88,0	1/1:0,26:33:255,95,0
+chr21	35832723	chr21:35832723:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,5:33:0,25,255	0/1:25,10:35:35,0,234	0/0:30,7:37:0,10,255
+chr21	35840723	chr21:35840723:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:25:255,20,0	1/1:1,20:21:255,45,0	0/1:5,15:21:206,0,26
+chr21	35840875	chr21:35840875:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7,0:8:107,6,0,110,23,135	0/1:2,6,0:8:78,0,11,84,34,135	1/2:2,6,5:14:159,43,49,46,0,89
+chr21	35841486	chr21:35841486:M	TTTTTTTTGTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,14,6:22:255,97,54,193,0,196	1/1:1,23,0:24:255,53,0,255,70,255	1/2:2,12,14:29:255,216,173,142,0,149
+chr21	35842576	chr21:35842576:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,16:19:255,56,0	1/1:0,12:12:255,36,0	1/1:0,21:25:255,74,0
+chr21	35843636	chr21:35843636:M	AGATCAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	<12.2>,<13.2>,<14.2>	.	.	Motif=AGAT	GT:AD:DP:PL	0/1:10,15,0,0:25:220,0,121,250,192,255,255,193,255,255	1/3:0,9,0,14:23:255,255,255,255,253,255,164,0,163,232	0/2:12,0,14,0:26:255,255,255,0,223,255,255,255,255,255
+chr21	35850352	chr21:35850352:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,40,0	1/1:2,33:36:255,60,0	1/1:4,35:40:255,35,0
+chr21	35851419	chr21:35851419:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,14:19:255,250,199,91,0,36	2/2:0,1,16:19:255,255,255,51,27,0	2/2:0,1,19:20:255,255,255,60,41,0
+chr21	35874526	chr21:35874526:M	TTTTGTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:15:221,27,0	0/1:2,6:10:88,0,4	1/1:2,16:22:237,7,0
+chr21	35880490	chr21:35880490:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:93,17,0	1/1:0,6:7:89,8,0	0/1:2,8:10:111,0,6
+chr21	35894902	chr21:35894902:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:21:151,0,98	0/0:24,4:29:0,17,255	0/1:13,8:24:99,0,156
+chr21	35926944	chr21:35926944:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:16:173,0,18	1/1:4,23:29:255,12,0	1/1:4,23:29:255,13,0
+chr21	35942571	chr21:35942571:M	CACACACACACACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:20,13:33:255,0,255	0/1:19,15:34:255,0,255
+chr21	35946176	chr21:35946176:M	AGAGAGAGAGAGAGAAAGAAAGAGGGAGAGAGAGAGGGAGAGAGAAGGGGGGGACAGAGAGAGAGAGA	<32>	.	.	Motif=AG	GT:AD:DP:PL	0/0:13,0:14:0,42,255	0/1:3,7:10:166,0,48	0/1:7,7:15:174,0,145
+chr21	35957269	chr21:35957269:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:7,15:25:192,0,64	0/1:11,4:19:58,0,141
+chr21	35960221	chr21:35960221:M	TCTCTCTCTCTCTCTCTCTCTCTCT	<11.5>,<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:18,9,0:27:44,0,163,119,190,255	0/2:4,3,7:14:52,51,143,0,4,47	0/2:12,0,9:21:59,117,255,0,126,99
+chr21	35960245	chr21:35960245:M	TATATATATATATATACATATACATATATATATAT	<19.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,16:20:255,28,0	1/1:0,4:4:88,12,0	1/1:0,9:10:200,27,0
+chr21	35960440	chr21:35960440:M	TGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGG	<9.8>,<12.8>	.	.	Motif=TGGA	GT:AD:DP:PL	2/2:0,0,26:26:255,255,255,77,78,0	1/2:0,7,5:12:255,89,109,185,0,170	1/2:0,16,10:26:255,185,219,255,0,255
+chr21	35965382	chr21:35965382:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,45,255	0/1:9,16:26:198,0,73	0/1:11,11:24:126,0,125
+chr21	35966749	chr21:35966749:M	TTTTTTGTTTTGTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:23:0,63,255	0/1:11,5:16:81,0,248	0/1:7,8:17:177,0,141
+chr21	35967625	chr21:35967625:M	TTTTTTGTTGTTTGTTTTTGTTTGTTTTTTTTTTGTATGTTTGTTTTTTTTTT	<52>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,46,255	0/1:7,13:20:174,0,65	0/1:14,10:24:115,0,182
+chr21	35968833	chr21:35968833:M	GAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAG	<17.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:14,14:29:158,0,158	0/1:15,10:25:104,0,192
+chr21	35970172	chr21:35970172:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:24:0,51,255	0/1:13,5:18:34,0,174	0/1:9,10:21:122,0,114
+chr21	35975950	chr21:35975950:M	GAATGAGATAGAATGAAAATAATGAATGAATGAATGAATGAATGA	<10.2>	.	.	Motif=GAAT	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/1:24,12:36:114,0,255	0/1:10,9:19:115,0,131
+chr21	35982990	chr21:35982990:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6,0:17:54,0,132,103,178,255	0/1:9,4,0:14:36,0,107,75,147,255	0/2:4,0,4:8:88,99,155,0,67,95
+chr21	35985925	chr21:35985925:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:66,0,5	0/1:1,1:2:14,0,14	1/1:0,0:3:16,3,0
+chr21	35985941	chr21:35985941:M	ATATATATATATATATATATATATATATGTATAT	<15>,<17.5>,<19>	.	.	Motif=AT	GT:AD:DP:PL	2/3:0,0,4,7:12:174,196,255,129,137,106,20,72,0,38	1/3:0,3,0,1:4:86,23,17,85,18,87,70,0,74,74	1/3:0,6,0,1:8:154,23,4,155,18,159,140,0,147,148
+chr21	35988750	chr21:35988750:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,0,0:12:0,32,255,24,255,255	0/1:5,6,0:15:197,0,129,132,155,255	0/2:2,2,6:13:207,88,130,0,30,34
+chr21	35990734	chr21:35990734:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:15:0,25,215	0/1:11,14:27:173,0,112	0/1:8,4:12:35,0,106
+chr21	35991721	chr21:35991721:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:36:0,84,255	0/1:11,13:27:246,0,174	0/1:16,16:34:255,0,255
+chr21	35999299	chr21:35999299:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,16:26:226,0,112	0/1:26,19:47:220,0,255	0/0:41,1:42:0,106,255
+chr21	36002580	chr21:36002580:M	AAAAAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<62>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:7,0:7:0,21,193	0/1:10,4:14:68,0,234
+chr21	36011661	chr21:36011661:M	TTTTTTTTTTTTTTTCTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,16:26:220,0,108	1/1:1,23:26:255,58,0	0/1:12,11:23:131,0,149
+chr21	36012783	chr21:36012783:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:26:198,0,124	0/1:11,16:28:206,0,110	0/0:22,1:24:0,52,255
+chr21	36015896	chr21:36015896:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,0:42:0,122,255	0/1:21,6:27:23,0,255	0/1:19,12:35:127,0,251
+chr21	36018714	chr21:36018714:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,3:12:20,36,187,0,105,123	2/2:0,0,9:9:157,182,255,26,27,0	0/1:8,11,0:21:158,0,82,212,120,255
+chr21	36022333	chr21:36022333:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:49:0,144,255	0/1:15,23:39:255,0,165	0/1:20,17:38:214,0,255
+chr21	36023845	chr21:36023845:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,2:14:0,6,178	0/1:5,2:7:13,0,64	0/1:4,8:13:100,0,41
+chr21	36026541	chr21:36026541:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0,0:24:0,70,255,72,255,255	0/1:8,7,1:17:85,0,94,85,121,255	0/2:16,1,12:32:255,210,255,0,255,255
+chr21	36027264	chr21:36027264:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19:34:255,0,162	0/1:32,25:58:255,0,255	0/0:54,1:57:0,149,255
+chr21	36028188	chr21:36028188:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,19:34:255,0,179	0/0:34,0:34:0,100,255	0/1:21,13:35:133,0,255
+chr21	36029251	chr21:36029251:M	AAAAAAAAAAAAAAGAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,6:32:89,0,255	0/1:2,10:13:229,0,13	0/0:13,0:15:0,42,255
+chr21	36037605	chr21:36037605:M	AAAAAAAAAAAAAAAATAGAAAAGAAAAAGAAAAAATAAAAATAAAAAA	<50>,<51>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1,0:10:0,9,128,24,151,227	0/2:3,2,3:10:55,21,67,0,39,79	0/1:2,7,0:9:97,0,9,103,35,152
+chr21	36041897	chr21:36041897:M	AAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,21,0:45:255,0,255,255,255,255	1/2:0,30,24:55:255,255,255,255,0,255	0/2:26,1,19:50:255,255,255,0,255,255
+chr21	36048718	chr21:36048718:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,2:14:16,0,143	1/1:0,7:9:120,14,0	0/1:9,4:13:33,0,123
+chr21	36052385	chr21:36052385:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:17,0,53	1/1:0,1:2:18,4,0	0/1:7,6:14:62,0,90
+chr21	36058506	chr21:36058506:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:187,0,174	0/1:11,9:25:180,0,255	0/0:21,0:22:0,66,255
+chr21	36062811	chr21:36062811:M	AAAACAAAACAAAACAAAACAAAA	<5.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:22,12:34:132,0,255	0/1:15,17:32:215,0,179	0/0:31,0:31:0,92,255
+chr21	36065532	chr21:36065532:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,8:22:82,0,183	0/1:9,14:24:173,0,95	0/0:22,1:23:0,50,255
+chr21	36070854	chr21:36070854:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>,<28>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,13:21:177,206,255,0,66,62	2/2:2,0,11:16:179,215,255,10,39,0	0/1:4,3,2:9:27,0,67,18,24,98
+chr21	36074330	chr21:36074330:M	TTTATTTATTTATTTATTTATTTGTTTGTTTGTTTGTTTGTTTATT	<10.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:7,3:10:27,0,103	1/1:0,13:13:233,38,0	0/1:20,7:27:50,0,255
+chr21	36076015	chr21:36076015:M	AACAACAACAACAA	<5.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:28,14:42:148,0,255	0/1:28,20:48:224,0,255	0/0:63,0:63:0,186,255
+chr21	36076746	chr21:36076746:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,21:45:255,0,255	0/1:22,17:39:185,0,255	0/0:47,1:48:0,123,255
+chr21	36079609	chr21:36079609:M	TTTTTTTTTGTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:146,0,184	0/1:25,14:40:129,0,255	0/0:37,0:37:0,109,255
+chr21	36080802	chr21:36080802:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,2:13:0,3,158	0/1:2,6:10:84,0,8	0/1:8,8:20:111,0,83
+chr21	36081135	chr21:36081135:M	AAAAAAAAAAAAAGAAAAAGAAAAGAAAAGAAAA	<33>,<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,15,0:28:198,0,161,255,239,255	1/2:0,15,10:26:255,251,209,255,0,255	0/2:11,1,7:19:141,160,255,0,180,255
+chr21	36082608	chr21:36082608:M	TTTTTTTTTTTTTTTTTTTTTT	<18>,<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7,4,1:21:255,0,144,84,111,234,255,90,174,255	2/3:0,0,7,7:15:255,251,255,121,195,167,195,121,0,166	0/3:5,0,0,1:8:7,28,195,18,184,181,0,97,95,77
+chr21	36084184	chr21:36084184:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:12:72,0,73	1/1:2,14:19:205,9,0	0/1:6,5:12:53,0,79
+chr21	36086854	chr21:36086854:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,51	0/1:1,3:4:37,0,5	1/1:0,1:1:17,3,0
+chr21	36089404	chr21:36089404:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:3:0,8,40	0/1:0,1:3:20,0,3	0/1:4,3:8:29,0,59
+chr21	36092423	chr21:36092423:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<12>,<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,3:7:159,44,24,51,0,31	1/2:0,1,3:5:102,42,28,26,0,13	1/2:0,2,5:8:167,71,52,29,0,9
+chr21	36096200	chr21:36096200:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,15:30:192,0,191	0/0:27,1:28:0,65,255	0/1:23,13:36:131,0,255
+chr21	36096365	chr21:36096365:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:17:192,32,0	0/1:8,8:19:70,0,59	0/0:12,1:15:0,23,149
+chr21	36112325	chr21:36112325:M	AAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,5,0:21:86,0,255,94,255,255	0/1:11,6,0:17:111,0,255,98,255,255	1/2:0,6,5:14:255,87,56,102,0,86
+chr21	36113676	chr21:36113676:M	CACACACACACACACACACACAC	<7.5>,<10.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:1,0,5:8:66,78,166,9,21,0	1/2:0,5,2:7:146,23,35,126,0,120	0/0:6,0,0:6:0,18,174,16,89,71
+chr21	36114246	chr21:36114246:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,4:9:45,68,222,0,69,45	0/1:1,1,0:7:43,0,18,26,11,33	1/2:0,7,5:15:255,86,108,195,0,174
+chr21	36115229	chr21:36115229:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,8,0:11:111,0,21,141,45,251	0/2:6,1,6:14:72,92,224,0,69,72	1/2:2,7,8:20:210,106,168,120,0,183
+chr21	36116142	chr21:36116142:M	TTTTTCTTTCTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:22,1:25:0,53,255	0/1:19,14:35:155,0,255
+chr21	36118512	chr21:36118512:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,6,57	0/1:4,3:9:63,0,92	0/0:2,0:4:0,12,84
+chr21	36122200	chr21:36122200:M	AAAAAAGAAAAAAAAAAAAAAAA	<22>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0,0:21:0,61,255,60,255,255	0/1:17,9,0:27:84,0,207,160,255,255	0/2:12,0,8:21:165,207,255,0,206,255
+chr21	36123192	chr21:36123192:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAAAATA	<11>,<12>	.	.	Motif=AAAT	GT:AD:DP:PL	0/2:7,0,12:19:178,199,255,0,133,80	0/1:3,4,0:7:97,0,65,72,53,107	2/2:1,0,9:10:152,155,182,11,29,0
+chr21	36124861	chr21:36124861:M	AAAAAAGAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,23:44:255,0,255	0/0:31,1:32:0,76,255	1/1:0,34:37:255,107,0
+chr21	36127575	chr21:36127575:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:12:0,35,209	0/0:12,0:12:0,35,200	0/1:4,4:8:45,0,45
+chr21	36128711	chr21:36128711:M	TTTTTCTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:23:0,57,255	0/1:9,6:18:49,0,96	0/0:30,0:31:0,90,255
+chr21	36131912	chr21:36131912:M	AAATAAATAAATAAATAAATAATTTAAAAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,9:26:71,0,119	0/1:7,5:18:38,0,68	1/1:0,25:33:255,45,0
+chr21	36133767	chr21:36133767:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,6,1:8:201,119,100,24,5,0,121,77,6,101	0/1:2,9,1,0:13:248,0,25,134,37,161,238,52,189,255	2/3:0,1,11,5:17:255,255,255,87,69,38,201,143,0,155
+chr21	36133848	chr21:36133848:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,69,0	1/1:1,9:10:139,12,0	0/1:12,11:23:129,0,147
+chr21	36136309	chr21:36136309:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12,1:31:144,0,247,172,255,255	0/2:7,2,11:21:255,161,238,0,101,157	1/2:1,14,13:29:255,214,155,198,0,185
+chr21	36137028	chr21:36137028:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,6:10:246,123,99,35,0,6	0/0:0,0,0:1:0,0,0,0,0,0	1/2:0,3,4:7:197,67,47,51,0,30
+chr21	36137467	chr21:36137467:M	AAAGAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAG	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:17,2:19:0,12,255	0/1:7,4:13:72,0,135	0/0:30,1:31:0,68,255
+chr21	36137504	chr21:36137504:M	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<7.5>,<11.5>,<12.5>,<13.5>	.	.	Motif=AAGG	GT:AD:DP:PL	2/4:0,0,19,0,11:30:255,255,255,191,255,248,255,255,190,255,255,255,0,255,255	3/4:1,0,1,6,12:20:255,255,255,255,255,255,150,210,192,154,95,113,67,0,56	1/2:0,27,17,0,0:44:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
+chr21	36138104	chr21:36138104:M	TTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTTGTTTTGTTT	<6.6>,<9.6>	.	.	Motif=TTTAG	GT:AD:DP:PL	0/1:14,10,0:24:210,0,255,253,255,255	0/0:21,0,0:21:0,63,255,62,255,255	1/2:0,13,14:27:255,255,255,255,0,255
+chr21	36138720	chr21:36138720:M	TTTTCTTTTCTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,16:18:255,15,0	0/0:3,0:4:0,9,88	0/1:5,9:16:226,0,104
+chr21	36139377	chr21:36139377:M	TTTTTCTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,4:13:36,41,221,0,81,94	0/2:7,0,7:15:74,114,255,0,117,84	1/2:2,7,6:20:238,71,145,158,0,186
+chr21	36139882	chr21:36139882:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:6:0,7,72	0/1:8,4:13:25,0,99	1/1:0,1:3:38,8,0
+chr21	36141262	chr21:36141262:M	AAAAAAAAAAAAAAA	<17>,<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,1,6,0:21:131,88,255,0,255,255,173,255,255,255	0/2:10,1,7,0:20:174,105,255,0,249,255,206,255,255,255	1/3:1,3,2,3:10:159,63,75,80,55,93,73,0,18,92
+chr21	36143880	chr21:36143880:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:12:122,0,28	0/1:3,6:12:139,0,43	0/1:5,3:8:54,0,105
+chr21	36145961	chr21:36145961:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1,0:11:0,4,229,21,158,150	1/2:1,5,3:10:160,25,34,75,0,66	0/0:9,0,0:10:0,30,255,29,191,166
+chr21	36146908	chr21:36146908:M	TCTCTCTCTCTCTCTCT	<5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:8,3:11:56,0,166	0/0:17,0:19:0,55,255	1/1:0,5:5:148,15,0
+chr21	36148538	chr21:36148538:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:27:0,79,255	0/1:14,12:28:128,0,182	0/0:20,0:23:0,64,255
+chr21	36152312	chr21:36152312:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:17:0,16,255	0/1:2,4:11:109,0,29	0/0:7,0:8:0,21,195
+chr21	36154077	chr21:36154077:M	AAAAAAAAAAAAAAAGAAAGAAAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0,1:17:0,37,255,21,209,181	0/1:11,9,0:20:203,0,255,152,186,255	2/2:0,1,8:11:152,127,124,26,9,0
+chr21	36154429	chr21:36154429:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13,0:27:166,0,166,238,205,255	0/2:12,0,11:24:139,204,255,0,177,141	1/1:4,24,0:28:255,10,0,255,72,255
+chr21	36155067	chr21:36155067:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,19,0:33:255,0,255,255,229,255	0/2:16,1,17:36:209,236,255,0,255,200	1/2:0,24,18:42:255,255,207,255,0,255
+chr21	36155104	chr21:36155104:M	TTTTTTTTTTGTTGTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:33:191,0,173	0/0:43,1:44:0,112,255	1/1:0,33:34:255,99,0
+chr21	36158803	chr21:36158803:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:27,0,204	0/0:9,0:12:0,29,255	1/1:0,11:15:255,36,0
+chr21	36161139	chr21:36161139:M	TGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/0:43,0:43:0,129,255	0/1:27,16:43:255,0,255
+chr21	36163345	chr21:36163345:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,1:15:0,19,255	0/0:17,0:18:0,54,255	1/1:0,3:5:99,14,0
+chr21	36163357	chr21:36163357:M	AAAGAAAGAAAGAAAG	<2.2>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:15,1:18:14,0,255	0/1:11,4:17:102,0,255	1/1:0,3:7:149,18,0
+chr21	36165719	chr21:36165719:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7,1:21:78,0,161,90,196,255	0/2:7,2,3:12:56,22,109,0,90,168	0/1:6,2,1:11:15,0,98,13,106,181
+chr21	36166437	chr21:36166437:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/1:13,12:25:139,0,156	0/0:34,0:35:0,103,255
+chr21	36167915	chr21:36167915:M	TTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,5:7:146,0,40	0/0:3,0:6:0,13,118	1/1:0,2:4:96,12,0
+chr21	36170609	chr21:36170609:M	ATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,0:36:0,89,255	0/0:16,0:16:0,48,255	0/1:21,16:39:255,0,255
+chr21	36170802	chr21:36170802:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,3:28:0,28,255	0/1:6,11:18:137,0,61	0/0:28,5:33:0,9,255
+chr21	36173425	chr21:36173425:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,0,6:19:56,110,255,0,204,186	0/0:22,0,0:24:0,47,255,66,255,255	1/2:1,12,6:20:255,99,130,199,0,255
+chr21	36173868	chr21:36173868:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,21:42:255,0,255	0/0:39,3:46:0,62,255	0/1:18,17:37:218,0,220
+chr21	36175117	chr21:36175117:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:26:146,0,255	0/0:26,1:28:0,47,255	0/1:20,16:38:255,0,255
+chr21	36176088	chr21:36176088:M	GTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTG	<23.5>,<27.5>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,14:19:255,255,255,53,53,0	1/2:0,17,13:32:255,255,255,255,0,255	2/2:0,0,13:19:255,255,255,51,51,0
+chr21	36178438	chr21:36178438:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:28:125,0,226	0/1:12,11:24:127,0,145	0/0:32,3:36:0,51,255
+chr21	36180579	chr21:36180579:M	AAAAAAAGAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:16,20:36:255,0,185	0/1:22,22:44:255,0,255
+chr21	36180886	chr21:36180886:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,17:36:222,0,208	0/0:26,1:28:0,64,255	0/1:16,15:35:184,0,206
+chr21	36183867	chr21:36183867:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,5:17:105,0,186	0/1:11,8:22:154,0,255	0/0:32,0:34:0,101,255
+chr21	36190010	chr21:36190010:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:15:63,0,100	0/1:7,3:12:28,0,87	0/0:11,1:13:0,10,165
+chr21	36191256	chr21:36191256:M	AAAAAAAAAAAAACAAAAAACAGAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	0/1:13,13:26:154,0,153	0/1:15,20:35:255,0,170
+chr21	36192392	chr21:36192392:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:18:164,0,179	0/0:19,0:22:0,60,255	0/1:10,4:14:66,0,231
+chr21	36192694	chr21:36192694:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:20:156,0,92	0/0:39,0:39:0,115,255	0/1:17,9:26:89,0,235
+chr21	36194488	chr21:36194488:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<20>,<23>	.	.	Motif=T	GT:AD:DP:PL	3/4:0,1,1,5,3:11:162,164,175,130,123,122,41,38,41,54,73,79,46,0,121	1/2:1,3,3,2,0:10:43,38,64,16,0,27,11,12,18,113,66,82,55,135,235	0/4:5,0,0,0,5:13:127,142,182,131,164,160,110,155,152,213,0,55,35,104,131
+chr21	36195341	chr21:36195341:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:5:37,0,20	0/0:2,0:3:0,8,44	0/1:4,2:9:20,0,64
+chr21	36199443	chr21:36199443:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,16:45:255,0,255	0/1:24,8:33:107,0,255	0/0:23,0:23:0,69,255
+chr21	36206011	chr21:36206011:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:35:255,66,0	0/1:23,18:44:201,0,255	0/1:14,20:34:255,0,156
+chr21	36206530	chr21:36206530:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,14:27:193,0,122	0/1:8,9:18:111,0,86	0/0:32,0:33:0,97,255
+chr21	36217075	chr21:36217075:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:78,2,0	0/1:5,3:8:26,0,60	1/1:1,6:7:85,3,0
+chr21	36220668	chr21:36220668:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:74,0,65	0/1:13,9:24:104,0,155	1/1:0,19:22:255,61,0
+chr21	36228766	chr21:36228766:M	AAAATAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<10.4>,<11.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,9,0:9:255,27,0,198,27,175	1/2:0,2,7:9:158,107,101,36,0,10	1/1:0,12,0:12:255,36,0,255,35,227
+chr21	36231845	chr21:36231845:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:18:255,54,0	1/1:0,11:14:255,38,0	1/1:0,18:18:255,54,0
+chr21	36236751	chr21:36236751:M	TTTTTTTCTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<45>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:112,20,0	0/1:2,4:6:47,0,15	1/1:0,3:4:61,11,0
+chr21	36241676	chr21:36241676:M	TTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTT	<35>,<36>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,9:15:255,133,115,94,0,55	1/1:0,6,0:6:164,18,0,117,18,101	1/2:0,8,3:12:241,44,17,142,0,112
+chr21	36242152	chr21:36242152:M	ATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:11,0:11:0,32,195	0/1:12,12:24:149,0,149
+chr21	36243350	chr21:36243350:M	TTTTTTTTTCCTTTTCTTCTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:26:0,58,255	0/1:12,5:19:31,0,168	0/0:20,1:22:0,44,255
+chr21	36246844	chr21:36246844:M	TTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTAT	<8.8>,<9.8>	.	.	Motif=TTATG	GT:AD:DP:PL	1/1:0,23,0:24:255,70,0,255,69,255	1/1:0,20,0:21:255,63,0,255,62,255	1/2:0,10,7:17:255,112,82,186,0,139
+chr21	36257588	chr21:36257588:M	TAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAAGTAGTTAGGTAAATAGATAGAT	<14>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:12,4:16:55,0,253	0/1:10,3:13:38,0,212	0/1:11,5:16:80,0,228
+chr21	36260154	chr21:36260154:M	AAAAAGAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:34:243,0,180	1/1:1,30:33:255,79,0	0/1:14,13:27:157,0,175
+chr21	36272650	chr21:36272650:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:3,0,117	0/1:6,3:11:18,0,88	0/0:18,0:18:0,53,255
+chr21	36286640	chr21:36286640:M	ACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,10:20:124,0,124	1/1:0,26:27:255,79,0	0/1:15,13:29:160,0,182
+chr21	36289425	chr21:36289425:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<26.5>,<27.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,0,8:13:255,216,204,255,144,255,147,0,147,123	1/2:1,11,5,1:18:255,77,120,255,0,255,255,78,255,255	2/3:1,0,8,5:15:245,255,255,73,92,48,104,155,0,114
+chr21	36302779	chr21:36302779:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:6:139,18,0	1/1:0,6:6:171,18,0	1/1:0,3:5:99,12,0
+chr21	36305752	chr21:36305752:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:22:0,46,255	0/1:12,11:23:126,0,143	0/1:17,21:38:255,0,196
+chr21	36306937	chr21:36306937:M	AAAAAAAAAAAAAAGAAAAAGAAAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,11:19:145,197,255,0,124,91	1/2:0,10,4:15:209,76,79,169,0,230	0/1:13,13,1:28:161,0,163,218,178,255
+chr21	36307652	chr21:36307652:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:21:0,61,255	0/1:9,6:21:132,0,219	0/1:4,3:10:60,0,101
+chr21	36308874	chr21:36308874:M	TTTATTTATTTATTTATTTATTTATTTATTTATTT	<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:8,5:13:100,0,186	0/1:13,3:16:36,0,255	1/1:0,9:9:254,27,0
+chr21	36309316	chr21:36309316:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:6:19,0,54	0/1:1,1:2:11,0,11	1/1:0,14:16:255,47,0
+chr21	36310424	chr21:36310424:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,14:34:255,0,255	0/0:23,0:23:0,69,255	0/1:26,4:31:31,0,255
+chr21	36313320	chr21:36313320:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,6:24:34,0,243	0/0:18,0:25:0,68,255	0/0:20,3:25:0,9,255
+chr21	36318465	chr21:36318465:M	AAAAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/1:9,9:19:108,0,102	0/0:23,0:23:0,68,255
+chr21	36327156	chr21:36327156:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:3:0,6,45	1/1:0,5:6:159,15,0	0/0:3,0:5:0,9,94
+chr21	36328343	chr21:36328343:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:8:0,23,125	0/1:2,3:6:39,0,13	0/1:8,4:12:27,0,88
+chr21	36328907	chr21:36328907:M	AAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,13:23:255,0,131	0/1:10,8:22:165,0,226	0/1:12,8:24:153,0,255
+chr21	36329295	chr21:36329295:M	AAAAACAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:22:0,65,255	0/1:11,16:30:255,0,236	0/0:22,0:25:0,74,255
+chr21	36331602	chr21:36331602:M	AAAAAAACAAAAAACAAACAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:21:186,0,255	0/1:13,13:27:255,0,255	0/1:17,14:31:255,0,255
+chr21	36332791	chr21:36332791:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10:27:116,0,216	0/1:11,4:17:32,0,154	0/1:16,8:25:71,0,226
+chr21	36335311	chr21:36335311:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:22,0,51	0/1:2,2:7:64,0,43	0/1:6,3:10:72,0,151
+chr21	36343093	chr21:36343093:M	GTTTTTTTGTTTGTTTGTTTG	<5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:24,18:42:255,0,255	0/1:22,18:40:255,0,255	0/1:19,27:46:255,0,255
+chr21	36343450	chr21:36343450:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:26:185,0,255	0/1:14,9:24:184,0,255	0/1:9,18:30:255,0,172
+chr21	36347008	chr21:36347008:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:19:11,0,171	0/0:11,0:15:0,41,221	0/1:7,6:15:62,0,92
+chr21	36350543	chr21:36350543:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,6:16:70,0,115	0/1:10,7:18:77,0,118	0/1:6,8:16:97,0,71
+chr21	36370599	chr21:36370599:M	ATATACATACATACATATATATATATATATATATATATATAT	<18.5>,<20.5>,<21.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,3,1,0:9:47,0,85,46,19,56,52,11,51,67	0/1:1,1,0,0:2:18,0,18,18,5,19,21,5,21,26	2/3:0,0,4,3:8:18,36,143,9,31,11,19,43,0,31
+chr21	36370670	chr21:36370670:M	TTCTTCTTCTTCTT	<6.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:4,3:7:50,0,75	1/1:0,0:1:7,2,0	1/1:0,2:2:47,6,0
+chr21	36371799	chr21:36371799:M	TGTTTTGTTTTGTTTTGTTTTTTTTTTTT	<5.6>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:9,11:20:157,0,118	0/0:17,1:18:0,33,255	0/1:8,12:22:179,0,100
+chr21	36381288	chr21:36381288:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,3:18:255,69,51,240,0,255	0/1:13,17,1:31:211,0,149,255,177,255	1/2:2,10,11:25:255,174,250,157,0,233
+chr21	36382523	chr21:36382523:M	TTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTT	<21>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,5:22:255,103,100,255,0,255	0/2:7,0,4:11:37,69,255,0,120,89	1/2:0,17,8:25:255,140,153,255,0,255
+chr21	36382695	chr21:36382695:M	TTATTATTATTATTATTATTATTATT	<7.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:10,20:30:255,0,105	0/1:11,14:26:188,0,124	0/1:13,16:30:222,0,157
+chr21	36383088	chr21:36383088:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:233,40,0	0/1:3,4:8:48,0,30	1/1:1,10:12:166,17,0
+chr21	36388469	chr21:36388469:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:11:100,0,111	0/1:7,2:11:27,0,159	0/1:3,4:8:92,0,57
+chr21	36389760	chr21:36389760:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/1:9,5:16:86,0,189	0/0:8,0:18:0,32,245
+chr21	36396654	chr21:36396654:M	AAAAAAAAAAGAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,14:27:174,0,156	0/0:39,0:42:0,122,255	0/1:11,12:23:146,0,128
+chr21	36397392	chr21:36397392:M	GTGTGTGTGTGT	<6.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:22,23:45:177,0,163	0/0:57,0:57:0,160,255	0/1:17,31:48:255,0,89
+chr21	36397720	chr21:36397720:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:9,0,26	0/1:3,3:6:33,0,33	0/0:2,0:4:0,11,58
+chr21	36404097	chr21:36404097:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,1:13:0,6,134	0/0:9,0:10:0,26,150	0/1:3,3:8:28,0,52
+chr21	36404400	chr21:36404400:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,9:30:86,0,255	0/0:34,1:36:0,88,255	0/1:12,11:25:125,0,162
+chr21	36404733	chr21:36404733:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:3:29,3,0	1/1:0,2:4:82,12,0	1/1:0,3:6:109,14,0
+chr21	36407301	chr21:36407301:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:14:16,0,141	0/0:12,2:14:0,7,171	0/1:8,6:16:68,0,104
+chr21	36411117	chr21:36411117:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:25:255,71,0	1/1:1,32:34:255,82,0	1/1:0,25:27:255,76,0
+chr21	36417329	chr21:36417329:M	TTTTTTTTCTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/0:33,0:35:0,100,255	0/1:18,24:43:255,0,255
+chr21	36418849	chr21:36418849:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:13:29,0,101	0/0:9,0:9:0,26,155	0/1:12,10:23:118,0,145
+chr21	36420337	chr21:36420337:M	TTCATTCATTCATTCATTCATTCATTCATTCATTCA	<10>,<11>	.	.	Motif=TTCA	GT:AD:DP:PL	0/2:21,0,10:31:202,191,255,0,255,255	1/2:0,10,9:19:255,162,109,154,0,127	0/1:17,21,0:38:255,0,211,255,255,255
+chr21	36433912	chr21:36433912:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18:40:233,0,255	0/0:23,0:26:0,75,255	0/1:11,14:26:182,0,136
+chr21	36436383	chr21:36436383:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:5:47,0,40	0/1:3,3:6:58,0,62	0/1:1,1:2:20,0,21
+chr21	36436914	chr21:36436914:M	ATATATATATA	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:40:255,118,0	0/1:21,18:39:199,0,246	1/1:0,40:40:255,118,0
+chr21	36437842	chr21:36437842:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:19,0:23:0,66,255	0/1:9,5:14:48,0,119
+chr21	36438131	chr21:36438131:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6,1:13:97,0,14,98,6,173	0/2:2,0,5:9:64,83,151,0,28,13	1/2:3,8,3:19:140,15,50,120,0,217
+chr21	36441053	chr21:36441053:M	CCCCGCCCCCACCCCC	<3.7>	.	.	Motif=CCCCAC	GT:AD:DP:PL	0/1:13,4:17:26,0,192	0/1:11,13:24:163,0,127	0/1:9,12:21:161,0,104
+chr21	36442154	chr21:36442154:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:19:18,0,220	0/0:28,1:30:0,70,255	0/1:17,10:29:101,0,229
+chr21	36443922	chr21:36443922:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:8:192,23,0	1/1:0,4:6:128,15,0	1/1:0,6:6:170,18,0
+chr21	36444734	chr21:36444734:M	AAAAAAAAAAAAAAAAAAA	<20>,<25>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,1,4,0:6:94,84,94,0,0,27,97,97,39,134	1/3:1,1,0,3:7:86,67,74,83,73,118,10,0,48,39	1/2:1,3,2,0:9:74,37,40,32,0,83,83,51,90,139
+chr21	36448351	chr21:36448351:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,4:10:64,24,118,0,34,41	0/1:2,3,0:6:68,0,41,50,33,69	0/2:5,0,3:9:25,43,175,0,92,69
+chr21	36448769	chr21:36448769:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:54,0:55:0,162,255	0/1:26,13:39:116,0,255	0/0:51,4:57:0,94,255
+chr21	36449331	chr21:36449331:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,98,255	0/1:13,10:27:201,0,255	0/0:35,0:36:0,108,255
+chr21	36450532	chr21:36450532:M	AAAAAAACAAAACAAAACAAAACAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:11,11:22:236,0,238	0/0:31,0:31:0,93,255
+chr21	36450893	chr21:36450893:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:32:0,75,255	0/1:13,9:23:94,0,178	0/0:34,0:35:0,103,255
+chr21	36451305	chr21:36451305:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3:8:31,53,168,0,66,49	0/1:6,3,2:12:63,0,161,51,67,128	0/2:5,0,3:9:36,52,201,0,84,61
+chr21	36454621	chr21:36454621:M	ACACACACACACACACACACACACACACACACACACACACACAC	<14>,<17>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,20:40:255,255,255,255,0,255	0/2:5,0,10:16:255,255,255,0,125,92	1/2:0,17,10:28:255,255,217,255,0,255
+chr21	36457708	chr21:36457708:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:91,0,31	0/1:3,7:10:89,0,21	0/1:4,6:10:74,0,40
+chr21	36459018	chr21:36459018:M	CAAACAAACAAACAAA	<3>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:14,21:35:255,0,168	0/0:24,0:24:0,71,255	0/1:16,17:33:223,0,204
+chr21	36459962	chr21:36459962:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:26:225,0,252	0/0:17,0:19:0,56,255	0/1:14,6:26:102,0,255
+chr21	36476456	chr21:36476456:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,15:18:252,16,0	1/1:2,24:26:255,41,0	1/1:1,18:20:255,31,0
+chr21	36485854	chr21:36485854:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,19:46:230,0,255	0/0:34,1:39:0,92,255	0/1:22,17:41:183,0,255
+chr21	36488221	chr21:36488221:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<15.5>,<16.5>	.	.	Motif=CCTT	GT:AD:DP:PL	1/1:0,4,0:5:123,12,0,83,12,72	1/2:0,2,0:5:96,22,11,49,0,36	2/2:0,0,3:4:95,61,53,9,9,0
+chr21	36489118	chr21:36489118:M	AAAAAAAAAAAAAAA	<16>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,7:9:246,245,244,27,27,0	1/2:0,3,0:4:39,14,6,32,0,76	1/2:0,2,5:9:146,132,134,12,0,41
+chr21	36490945	chr21:36490945:M	CACAGACACACACACACACACACACACACACACACACACACACAC	<20.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,6,6:12:255,93,75,109,0,75	1/1:0,22,0:24:255,72,0,255,70,255	1/2:0,14,8:25:255,121,70,255,0,221
+chr21	36496437	chr21:36496437:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12,0:15:255,42,0,255,41,238	1/2:0,3,3:6:118,42,33,50,0,33	1/2:0,3,7:12:194,102,87,68,0,39
+chr21	36501924	chr21:36501924:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,114,0	1/1:0,37:40:255,116,0	1/1:1,38:40:255,99,0
+chr21	36514623	chr21:36514623:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,12:14:255,41,0	1/1:0,12:15:255,44,0	1/1:0,8:10:235,25,0
+chr21	36515790	chr21:36515790:M	TTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:118,12,0	1/1:0,4:6:118,13,0	1/1:0,5:6:157,18,0
+chr21	36518076	chr21:36518076:M	ACACACACACACACACACACACACACACACACAC	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,15,20:35:255,255,255,255,0,178	2/2:0,2,29:32:255,255,255,95,58,0	1/1:0,37,0:38:255,114,0,255,112,255
+chr21	36518598	chr21:36518598:M	CAAACAAACAAACAAACAAACAA	<6.8>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,32:34:255,70,0	1/1:0,31:34:255,54,0	1/1:0,36:39:255,69,0
+chr21	36519710	chr21:36519710:M	AAAAACAACAACAACAACAACAACAAAACCCCAAAAACAAAAA	<7.7>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,24:24:255,71,0	1/1:0,30:30:255,89,0	1/1:0,27:30:255,80,0
+chr21	36523760	chr21:36523760:M	AAAGAAAGAAAGAGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	.	1/1:0,4:4:58,11,0	0/0:0,0:3:0,0,0
+chr21	36524115	chr21:36524115:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,33:38:255,55,0	1/1:0,40:40:255,117,0	0/1:18,31:51:255,0,198
+chr21	36532398	chr21:36532398:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,48,0:49:255,126,0,255,144,255	1/1:1,28,0:29:255,67,0,255,84,255	1/2:1,30,18:49:255,255,255,255,0,255
+chr21	36535390	chr21:36535390:M	AAATAAATACATAAATAAATAAAAGTAAAAAATAAA	<8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:0,28:29:255,82,0	0/1:11,18:31:240,0,114
+chr21	36537630	chr21:36537630:M	TTTTTTCTTTGTTTTTCTTTTCTTTTCTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:172,18,0	1/1:0,1:2:29,3,0	0/0:19,0:19:0,57,255
+chr21	36537990	chr21:36537990:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,17,10:39:255,184,150,255,0,255	1/2:0,21,6:35:255,145,54,255,0,255	0/1:17,16,0:35:255,0,255,255,255,255
+chr21	36539312	chr21:36539312:M	GAGTGAGTGCGTGTGGAGTGTGTGTGGAGTGAGTGTGTGTGGAGTGAGTGTATGTGCGGAGTGAGTGTGTGTGGAGTGAGTG	<2.2>	.	.	Motif=GAGT	GT:AD:DP:PL	1/1:1,18:19:255,32,0	1/1:0,18:22:255,54,0	1/1:1,14:19:255,20,0
+chr21	36552674	chr21:36552674:M	AAAACAAGACAAAAACAAAACAAAACAAAACAAAACAAAA	<7>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,24:24:255,71,0	1/1:0,48:48:255,142,0
+chr21	36555807	chr21:36555807:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,4:23:255,98,34,155,0,90	1/1:0,15,5:24:255,71,0,212,9,145	1/2:0,13,7:25:255,131,60,149,0,75
+chr21	36555851	chr21:36555851:M	GAGAGAGAGAGAG	<8.5>,<9.5>	.	.	Motif=GA	GT:AD:DP:PL	2/2:0,0,4:5:137,82,69,15,14,0	2/2:0,0,5:7:183,111,93,21,20,0	1/2:0,6,1:8:178,26,3,84,0,62
+chr21	36555863	chr21:36555863:M	GTGTGTGTGTGTGTG	<6.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,16:21:130,0,1	0/1:8,15:23:109,0,29	0/1:16,17:34:116,0,93
+chr21	36559173	chr21:36559173:M	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<5.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,24:25:255,74,0	1/1:0,35:35:255,105,0	1/1:0,31:31:255,93,0
+chr21	36560224	chr21:36560224:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:2,42:45:255,97,0	1/1:2,43:48:255,104,0
+chr21	36562698	chr21:36562698:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:43:255,126,0	1/1:0,40:43:255,122,0	1/1:0,43:48:255,135,0
+chr21	36565422	chr21:36565422:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:22:255,66,0	1/1:0,33:37:255,104,0	1/1:0,43:47:255,132,0
+chr21	36569416	chr21:36569416:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:34:0,95,255	0/0:31,0:31:0,93,255	0/1:15,7:23:123,0,255
+chr21	36573301	chr21:36573301:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:14:255,11,0	1/1:1,11:18:255,14,0	0/1:9,3:12:48,0,222
+chr21	36577422	chr21:36577422:M	AAAAAAAAAAAAGAAAAGAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,24:27:255,42,0	1/1:1,26:27:255,62,0	1/1:0,27:27:255,79,0
+chr21	36585863	chr21:36585863:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<11.2>,<13.2>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:9,11,0:23:233,0,171,236,112,255	0/1:3,8,0:11:180,0,45,171,37,188	0/2:3,0,5:10:48,54,160,0,27,13
+chr21	36595125	chr21:36595125:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:4:84,11,0	1/1:0,4:6:142,18,0	0/1:1,1:4:29,0,30
+chr21	36597906	chr21:36597906:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	1/1:0,7:9:141,26,0	0/1:4,6:12:80,0,47
+chr21	36598426	chr21:36598426:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,3:35:0,45,255	0/1:17,14:31:154,0,207	0/0:25,0:25:0,74,255
+chr21	36601775	chr21:36601775:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,1,42:44:255,255,255,111,111,0	2/2:0,1,30:31:255,255,255,91,73,0	1/2:0,21,22:43:255,255,255,255,0,255
+chr21	36603712	chr21:36603712:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:39,0:41:0,122,255	0/0:26,0:26:0,78,255	0/1:17,9:28:179,0,255
+chr21	36612458	chr21:36612458:M	TTATATTATATTATATTATATTATATTAT	<7.8>,<10.8>	.	.	Motif=TTATA	GT:AD:DP:PL	1/2:0,5,3:8:223,85,69,139,0,132	1/1:0,2,0:4:86,12,0,86,11,86	2/2:0,0,5:5:156,156,156,15,15,0
+chr21	36615947	chr21:36615947:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:30:255,78,0	1/1:0,31:31:255,91,0	1/1:0,50:50:255,147,0
+chr21	36623256	chr21:36623256:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:1,25:29:255,64,0	1/1:0,29:30:255,88,0
+chr21	36629951	chr21:36629951:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:62,0,89	0/1:4,3:8:48,0,72	0/0:11,0:16:0,41,255
+chr21	36629976	chr21:36629976:M	AAAGAAAGAAAGAAAG	<2.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:13,2:15:4,0,255	0/1:15,5:20:59,0,255	0/1:28,4:32:1,0,255
+chr21	36630329	chr21:36630329:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:7:22,0,45	0/1:5,5:11:46,0,58	0/0:12,2:16:0,11,168
+chr21	36634376	chr21:36634376:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:8:131,8,0	1/1:0,2:3:54,6,0	0/0:3,0:6:0,12,97
+chr21	36635067	chr21:36635067:M	TTTTTGTTTTATTTTAGTTTTTGTTTT	<3>	.	.	Motif=TTTTAG	GT:AD:DP:PL	0/1:9,12:23:255,0,155	0/1:14,6:21:104,0,255	0/0:25,1:27:0,49,255
+chr21	36638487	chr21:36638487:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:73,9,0	1/1:0,4:6:127,15,0	0/1:1,2:7:73,0,14
+chr21	36640229	chr21:36640229:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,11:21:255,205,147,160,0,127	1/2:2,18,20:40:255,255,241,234,0,226	0/1:28,18,0:46:197,0,255,255,255,255
+chr21	36644630	chr21:36644630:M	ATATATATATATGTGTATATATATATGTATATGTATGTATATATATGTGTATATAT	<29>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,6:16:96,23,0	1/1:0,6:9:79,18,0	0/0:9,1:13:0,12,95
+chr21	36644685	chr21:36644685:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:19,0,9:29:190,143,255,0,255,255	0/1:8,15,0:24:255,0,158,224,204,255	0/2:22,0,16:38:255,233,255,0,255,255
+chr21	36645694	chr21:36645694:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<11.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,5,15:20:255,255,255,137,0,93	1/2:0,3,4:8:145,77,110,80,0,65	0/1:13,2,1:16:13,0,255,37,209,225
+chr21	36645755	chr21:36645755:M	TATATATATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:14:207,138,111,35,30,0	2/2:0,0,8:13:144,93,78,14,18,0	1/1:3,14,3:21:139,25,0,87,16,122
+chr21	36645772	chr21:36645772:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<12.5>,<15.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,13,10:24:255,115,197,255,0,255	1/2:0,6,9:18:255,110,198,165,0,135	0/1:9,9,6:28:206,0,255,160,20,216
+chr21	36649303	chr21:36649303:M	TTTTTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,6:14:255,118,151,173,0,152	1/2:0,1,4:6:95,69,101,36,0,24	0/2:3,0,5:9:77,99,228,0,54,28
+chr21	36650763	chr21:36650763:M	AAAAAAAAAAGAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,14:36:162,0,255	0/1:17,11:29:118,0,213	0/0:30,0:30:0,88,255
+chr21	36651873	chr21:36651873:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:15,13:30:166,0,202	0/1:20,6:26:35,0,255	0/1:18,5:24:24,0,255
+chr21	36656169	chr21:36656169:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,23:46:255,0,255	0/1:24,20:44:227,0,255	0/0:35,0:35:0,103,255
+chr21	36657147	chr21:36657147:M	AAAAAAAAAAAAAAAA	<17>,<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,4,2:9:171,90,69,46,0,28,89,25,18,97	2/3:0,1,10,2:14:255,214,183,41,26,5,170,126,0,143	0/3:8,0,0,9:18:214,235,255,157,255,255,0,149,221,198
+chr21	36657951	chr21:36657951:M	AAAAAAAAAAAAAAAACAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,5:16:255,80,46,143,0,137	1/2:0,3,5:8:167,84,62,43,0,28	0/2:5,1,5:11:110,71,129,0,72,113
+chr21	36658195	chr21:36658195:M	TTTATTTATTTTTTATATATTTATATATTTATAAATATTTTTATTTATTTATT	<14>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:5,5:10:78,0,75	1/1:0,1:1:22,3,0	1/1:0,1:3:22,3,0
+chr21	36659451	chr21:36659451:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,9:16:113,0,61	1/1:1,14:17:236,33,0	0/1:14,3:17:1,0,190
+chr21	36661240	chr21:36661240:M	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	<7.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,11:12:160,34,0	1/1:0,15:15:199,42,0	0/1:5,5:10:39,0,39
+chr21	36661504	chr21:36661504:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:8:131,41,26,66,0,48	1/1:0,6,1:7:160,18,0,98,5,79	0/2:4,0,4:8:41,53,150,0,64,41
+chr21	36661524	chr21:36661524:M	AAGAAGAAGAAGAAAAAGAAAAGAA	<10.3>	.	.	Motif=AAG	GT:AD:DP:PL	0/0:9,0:10:0,27,218	0/0:15,0:15:0,45,255	0/1:7,5:16:70,0,189
+chr21	36664510	chr21:36664510:M	ACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11,0:16:152,35,0,187,38,255	1/1:0,13,0:22:188,44,0,233,48,255	1/2:2,5,6:14:145,108,135,47,0,148
+chr21	36664552	chr21:36664552:M	AGAGAGAGAAAGAGCGAGAGAGA	<13.5>,<16.5>,<18.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,0,9,18:27:255,255,255,255,255,255,209,209,0,140	2/3:0,0,8,5:13:255,255,255,115,115,81,183,183,0,154	1/3:0,10,1,15:27:255,255,255,255,255,255,229,0,231,209
+chr21	36665099	chr21:36665099:M	TCTCTCTCTCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:11,12:30:255,0,167	0/1:6,8:19:166,0,83	0/1:11,17:37:255,0,177
+chr21	36665121	chr21:36665121:M	TTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,17:25:255,0,2	1/1:0,17:21:255,28,0	0/1:10,14:26:255,0,208
+chr21	36665702	chr21:36665702:M	ATATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13,0:23:197,35,0,226,34,255	1/1:0,6,0:9:97,22,0,111,23,138	2/2:0,2,10:18:20,39,214,2,5,0
+chr21	36665725	chr21:36665725:M	TTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,9:15:255,221,201,29,15,0	1/2:0,1,3:6:110,71,62,23,0,10	1/1:0,8,1:13:242,26,0,184,2,167
+chr21	36668367	chr21:36668367:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,7:21:67,109,255,0,183,188	0/2:14,1,6:22:51,94,255,0,186,191	0/1:16,13,0:30:157,0,200,240,241,255
+chr21	36672834	chr21:36672834:M	ACACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/0:31,1:33:0,79,255	0/1:15,10:25:88,0,169	0/0:23,0:24:0,70,255
+chr21	36673359	chr21:36673359:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,17:30:235,0,132	0/0:25,2:30:0,49,255	0/0:24,2:27:0,33,255
+chr21	36675129	chr21:36675129:M	TTTTTTTTTCTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,32:33:255,97,0	1/1:0,33:33:255,97,0
+chr21	36690462	chr21:36690462:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:8:62,0,21	0/1:4,7:12:80,0,42	0/1:1,7:10:92,0,0
+chr21	36700284	chr21:36700284:M	TTTCTCTCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTCCTCTTTCTTTCATTCT	<18.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,11:11:131,30,0	1/1:0,6:6:71,16,0	1/1:0,10:10:119,27,0
+chr21	36702943	chr21:36702943:M	AAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,11,0:26:123,0,188,197,255,255	1/2:0,6,5:11:213,128,110,102,0,147	0/0:27,0,0:28:0,82,255,84,255,255
+chr21	36716861	chr21:36716861:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,11:30:118,0,255	0/1:15,8:25:77,0,202	0/0:36,0:37:0,108,255
+chr21	36719947	chr21:36719947:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,14:29:180,0,198	0/1:16,18:34:222,0,186	0/0:39,0:39:0,115,255
+chr21	36733561	chr21:36733561:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:19:99,0,107	0/1:10,13:24:153,0,111	0/0:24,1:29:0,66,255
+chr21	36736712	chr21:36736712:M	CTTCCTTCCCTTCCTTCCCTCCTTCCCTTCC	<9>	.	.	Motif=CTTC	GT:AD:DP:PL	0/0:29,0:30:0,82,255	0/1:12,11:27:73,0,115	0/0:22,0:24:0,65,255
+chr21	36739982	chr21:36739982:M	AGAAAGAAGAGAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA	<15.8>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:4,2:6:39,0,95	1/1:0,5:6:128,4,0	0/0:9,0:9:0,27,255
+chr21	36744312	chr21:36744312:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:16:112,0,76	0/0:9,0:11:0,29,161	0/1:12,4:16:22,0,161
+chr21	36758984	chr21:36758984:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:25:0,55,255	0/1:18,8:26:64,0,240	0/0:37,1:39:0,96,255
+chr21	36760610	chr21:36760610:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:20:0,58,255	0/0:15,1:19:0,33,250	0/1:12,9:22:94,0,156
+chr21	36771997	chr21:36771997:M	AAAAAAAAAAAACAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,79,255	0/1:19,11:31:109,0,237	0/0:31,0:32:0,94,255
+chr21	36772639	chr21:36772639:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:46,0,18	1/1:0,1:2:28,6,0	0/0:9,1:11:0,15,147
+chr21	36772980	chr21:36772980:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,1,4:13:34,53,201,0,103,117	1/2:1,4,2:7:68,19,38,53,0,96	0/0:8,1,0:9:0,9,123,26,126,153
+chr21	36781260	chr21:36781260:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10,0:20:133,0,103,187,136,255	1/1:2,11,0:18:199,15,0,237,45,255	0/2:11,1,11:23:125,172,255,0,144,137
+chr21	36783796	chr21:36783796:M	TGCACATGCACACACACACATGCACATACACA	<5.7>	.	.	Motif=TGCACA	GT:AD:DP:PL	0/1:9,16:34:63,0,10	0/1:11,14:35:48,0,25	0/0:29,0:39:0,67,218
+chr21	36784312	chr21:36784312:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:14:0,25,255	0/1:12,13:28:255,0,255	0/0:12,1:18:0,4,255
+chr21	36786284	chr21:36786284:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,25:48:255,0,250	0/1:15,23:40:255,0,157	0/0:37,2:40:0,81,255
+chr21	36796869	chr21:36796869:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:18,2:22:0,28,255	0/1:12,13:27:178,0,142
+chr21	36801783	chr21:36801783:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,1,0:51:0,119,255,148,255,255	0/1:18,16,0:35:193,0,215,255,255,255	0/2:30,1,19:52:218,255,255,0,255,255
+chr21	36803755	chr21:36803755:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,40:42:255,103,0	1/1:1,39:42:255,105,0	1/1:1,36:38:255,94,0
+chr21	36808047	chr21:36808047:M	AAAATAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:30:255,70,0	1/1:0,33:35:255,102,0	1/1:1,38:40:255,99,0
+chr21	36816396	chr21:36816396:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:39:218,0,255	0/0:38,2:43:0,82,255	1/1:5,32:40:255,26,0
+chr21	36823611	chr21:36823611:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<25>	.	.	Motif=GT	GT:AD:DP:PL	0/2:4,0,3:11:87,78,181,0,105,96	0/0:22,0,0:26:0,77,255,77,255,255	1/2:0,4,8:15:255,209,188,118,0,89
+chr21	36827574	chr21:36827574:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:24:184,0,93	0/0:23,1:25:0,56,255	1/1:1,14:16:239,29,0
+chr21	36827798	chr21:36827798:M	TTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,11:20:144,0,106	0/0:12,1:13:0,21,192	1/1:0,10:11:170,23,0
+chr21	36828367	chr21:36828367:M	GAATGAATGAATGAATGAATGAATGAATGAATGAATGAGTGAATAAATG	<11.2>,<14.2>	.	.	Motif=GAAT	GT:AD:DP:PL	0/2:18,0,7:25:127,181,255,0,255,255	0/1:11,11,0:22:136,0,136,199,198,255	0/2:8,0,6:14:132,157,255,0,148,188
+chr21	36830822	chr21:36830822:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:5,0,11	1/1:0,3:6:57,5,0	.
+chr21	36833594	chr21:36833594:M	TATATATATATATATATATAT	<12>,<14>	.	.	Motif=TA	GT:AD:DP:PL	0/0:18,0,1:20:0,56,255,31,255,255	0/0:14,0,0:14:0,42,255,42,255,255	1/2:0,8,7:16:255,178,149,195,0,196
+chr21	36838299	chr21:36838299:M	CACACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:17,0:19:0,56,255	0/0:30,0:30:0,90,255	0/1:19,13:37:253,0,255
+chr21	36838704	chr21:36838704:M	AAAAGAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,16:27:205,0,93	0/0:27,2:29:0,52,255	1/1:1,23:28:255,52,0
+chr21	36848272	chr21:36848272:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,7:18:76,0,143	0/0:15,2:21:0,26,255	1/1:2,16:19:255,20,0
+chr21	36855369	chr21:36855369:M	AAAAATAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:24,2:27:0,43,255	0/1:18,10:28:101,0,248
+chr21	36855537	chr21:36855537:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:14:255,42,0	0/0:2,0:2:0,6,54	1/1:1,16:17:255,24,0
+chr21	36862946	chr21:36862946:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:29:0,83,255	0/0:26,0:29:0,81,255	0/1:13,8:24:154,0,255
+chr21	36866207	chr21:36866207:M	GGGAAGGGAATGGTAAGGGAAGGG	<5>	.	.	Motif=GGGAA	GT:AD:DP:PL	1/1:0,31:31:255,86,0	1/1:0,28:28:255,77,0	1/1:0,48:48:255,133,0
+chr21	36866841	chr21:36866841:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,19:33:248,0,149	0/0:26,1:31:0,60,255	0/1:22,17:43:176,0,255
+chr21	36869098	chr21:36869098:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:9,9:19:127,0,118	0/0:8,0:8:0,24,145	1/1:0,15:15:255,44,0
+chr21	36874405	chr21:36874405:M	AAAATAAAATAAAATAAAATAAAATAAAATAAATAAATTAAAA	<8.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:14,1:15:0,23,255	0/0:18,0:18:0,54,255	1/1:0,8:8:169,24,0
+chr21	36879916	chr21:36879916:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:23:111,0,167	0/0:17,2:24:0,34,255	0/1:17,14:32:172,0,215
+chr21	36880955	chr21:36880955:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>,<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:6,14,0:20:215,0,58,255,100,255	0/2:11,0,10:21:121,180,255,0,170,140	0/1:11,18,0:29:255,0,123,255,178,255
+chr21	36886433	chr21:36886433:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	0/1:1,2:4:25,0,7	0/1:1,0:2:6,0,11
+chr21	36887130	chr21:36887130:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:19:135,0,90	1/1:0,18:20:255,58,0	0/1:6,13:22:174,0,63
+chr21	36888433	chr21:36888433:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,6,0:8:51,0,0,57,21,85	0/1:2,4,0:6:31,0,7,37,24,77	1/2:0,1,3:4:70,36,25,10,0,1
+chr21	36888446	chr21:36888446:M	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,4:9:124,0,8	1/1:0,1:3:44,7,0	0/0:0,0:1:0,1,3
+chr21	36888495	chr21:36888495:M	TATTTATTTATTTATTT	<6.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:2,6:8:141,0,32	.	0/1:3,0:5:9,0,70
+chr21	36894847	chr21:36894847:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,20:49:229,0,255	0/0:29,0:31:0,90,255	1/1:3,34:39:255,59,0
+chr21	36906050	chr21:36906050:M	AAAAAAAAAAAAAAACAAAACAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:15:0,42,255	0/0:16,0:19:0,51,255	0/1:2,5:8:117,0,28
+chr21	36906678	chr21:36906678:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:4,13,10:28:255,116,215,177,0,255	0/2:7,2,11:20:130,152,255,0,67,82	1/1:1,23,0:24:255,53,0,255,69,255
+chr21	36908392	chr21:36908392:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:33:105,0,255	0/0:29,0:31:0,90,255	1/1:1,21:24:255,52,0
+chr21	36910547	chr21:36910547:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:27:252,0,255	0/0:31,0:31:0,93,255	1/1:0,25:29:255,78,0
+chr21	36911749	chr21:36911749:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:53,6,0	0/1:0,0:1:0,0,0	1/1:0,4:4:111,12,0
+chr21	36912072	chr21:36912072:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:12:36,0,107	0/0:14,2:17:0,14,205	0/1:13,6:20:46,0,179
+chr21	36917951	chr21:36917951:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:33:203,0,183	0/0:30,1:34:0,82,255	1/1:2,26:30:255,51,0
+chr21	36926742	chr21:36926742:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:71,0,0	0/1:2,8:11:115,0,2	0/1:6,1:9:2,0,89
+chr21	36931284	chr21:36931284:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:8:241,24,0	1/1:0,5:6:150,15,0	1/1:0,1:2:45,6,0
+chr21	36933552	chr21:36933552:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,6,2:10:169,13,16,97,0,90	2/2:0,0,4:4:68,68,68,12,12,0	1/2:0,6,6:13:246,88,67,111,0,77
+chr21	36942399	chr21:36942399:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:69,9,0	1/1:0,11:12:255,36,0	1/1:0,6:8:193,23,0
+chr21	36943818	chr21:36943818:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:139,0,109	1/1:2,15:21:255,25,0	0/1:10,12:23:154,0,117
+chr21	36948292	chr21:36948292:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:9:83,0,20	0/1:4,11:17:161,0,20	0/1:8,5:16:53,0,114
+chr21	36950180	chr21:36950180:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,29:54:255,0,255	1/1:0,45:45:255,132,0	0/1:21,20:41:252,0,255
+chr21	36950638	chr21:36950638:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:26:211,0,133	1/1:0,26:26:255,76,0	0/1:18,21:39:255,0,221
+chr21	36954744	chr21:36954744:M	AAAAAAACAAAACAAAACAAAACAAAACAAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,10:32:98,0,255	1/1:0,26:26:255,77,0	0/1:13,17:30:230,0,156
+chr21	36957053	chr21:36957053:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:15:160,0,70	1/1:0,20:25:255,63,0	0/1:4,6:13:138,0,73
+chr21	36958254	chr21:36958254:M	AAAGAAAGAAAGAAAGAAAGAAA	<6.8>,<8.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/2:13,0,8:26:255,255,255,0,210,255	1/2:0,6,8:30:255,255,255,67,0,162	0/1:13,8,0:24:74,0,167,144,236,255
+chr21	36960132	chr21:36960132:M	CCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,5:5:141,15,0	1/1:0,13:13:255,39,0	1/1:0,7:7:192,21,0
+chr21	36965732	chr21:36965732:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/1:17,10:27:99,0,223	0/0:29,1:32:0,73,255
+chr21	36965919	chr21:36965919:M	TGTTTTTTTTGTTTTGTTTT	<5>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:16,8:24:83,0,237	1/1:0,23:23:255,68,0	0/1:11,20:31:255,0,115
+chr21	36969582	chr21:36969582:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,22:31:255,0,82	1/1:0,22:25:255,71,0	0/1:11,21:37:255,0,210
+chr21	36970994	chr21:36970994:M	AAAAAAAAAAAAAGAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,14:32:255,0,255	1/1:0,18:19:255,54,0	0/1:11,8:20:153,0,240
+chr21	36973055	chr21:36973055:M	AAAAAAAAACAAAACA	<3.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:19,23:42:255,0,255	1/1:0,27:28:255,84,0	0/1:24,14:41:255,0,255
+chr21	36983837	chr21:36983837:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:84,15,0	1/1:0,2:2:32,6,0	0/1:1,2:4:32,0,5
+chr21	36985770	chr21:36985770:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5:22:50,0,177	0/0:31,3:37:0,56,255	0/1:23,9:35:78,0,255
+chr21	36989010	chr21:36989010:M	TTTTAATTTTATTTTATTTTATTTATTTATTTATTTATTTTTTTT	<8.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:9,7:16:109,0,155	0/1:5,10:15:179,0,68	0/1:13,13:27:214,0,212
+chr21	36992242	chr21:36992242:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,19:29:255,0,102	0/1:18,19:37:229,0,211	0/1:15,21:36:255,0,170
+chr21	36993289	chr21:36993289:M	AAACAAACAAACAAACAAA	<5.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:22,19:41:247,0,255	0/1:12,11:23:132,0,151	0/1:23,21:44:255,0,255
+chr21	36995250	chr21:36995250:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:43:255,126,0	1/1:0,49:49:255,147,0	1/1:0,49:49:255,147,0
+chr21	36996415	chr21:36996415:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,18:27:253,0,66	0/1:12,13:25:150,0,133	0/1:12,16:28:200,0,130
+chr21	36996511	chr21:36996511:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:19:189,0,220	0/1:10,8:18:166,0,221	0/1:21,13:34:255,0,255
+chr21	36998164	chr21:36998164:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:34:212,0,202	0/1:7,11:18:138,0,69	0/1:11,23:35:255,0,104
+chr21	37002773	chr21:37002773:M	TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:9:46,0,64	0/1:5,4:11:48,0,65	0/1:4,7:12:92,0,38
+chr21	37004922	chr21:37004922:M	TTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:6:30,0,69	0/1:5,9:18:237,0,103	0/1:2,3:7:79,0,43
+chr21	37005243	chr21:37005243:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:2,19:24:255,35,0	0/1:3,10:13:137,0,15
+chr21	37008757	chr21:37008757:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:81,3,0	1/1:0,7:9:140,26,0	1/1:0,10:10:173,29,0
+chr21	37009235	chr21:37009235:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,28:55:255,0,255	0/1:23,22:46:255,0,255	0/1:17,27:44:255,0,183
+chr21	37010993	chr21:37010993:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,13:30:255,225,255,255,0,255	1/2:0,15,11:26:255,192,234,255,0,255	1/2:1,13,16:32:255,255,255,229,0,255
+chr21	37012213	chr21:37012213:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATT	<12.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/2:5,0,10:15:146,187,255,0,81,51	0/2:4,0,6:10:78,106,213,0,60,42	1/2:0,13,2:15:233,36,13,237,0,255
+chr21	37012864	chr21:37012864:M	TTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,8:10:204,0,12	1/1:0,4:5:127,15,0	1/1:0,7:9:201,15,0
+chr21	37015876	chr21:37015876:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:14:0,30,207	0/1:14,7:22:55,0,183	0/1:8,8:17:90,0,100
+chr21	37017153	chr21:37017153:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,6:15:243,95,73,87,0,90	1/2:2,4,3:10:101,25,33,23,0,62	1/2:0,5,3:9:135,44,28,65,0,64
+chr21	37019265	chr21:37019265:M	AAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:24:255,0,67	1/1:0,10:16:255,31,0	1/1:0,17:23:255,28,0
+chr21	37022163	chr21:37022163:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:62,0,70	0/1:5,0:7:3,0,63	0/1:5,2:7:14,0,65
+chr21	37026043	chr21:37026043:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,15:25:220,0,97	0/1:11,17:29:227,0,112	0/1:16,20:36:255,0,190
+chr21	37026491	chr21:37026491:M	GAGAGAGAGAGAGA	<6>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,43:44:255,129,0	1/1:0,58:58:255,171,0
+chr21	37039780	chr21:37039780:M	CCTTCCCTTTCCCTTCCCTCTCCTTTCCTCTCCTTTCCTCTCTTTTCCTCTCCTTTCCTTTCCTTTCCT	<5.4>	.	.	Motif=CCTTT	GT:AD:DP:PL	0/1:2,2:4:60,0,37	0/1:1,3:4:105,0,12	0/1:1,2:3:57,0,16
+chr21	37042969	chr21:37042969:M	TATTTATTTATTTATTTATTTATTTATTT	<5.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	0/1:10,11:21:239,0,214	1/1:0,34:34:255,102,0
+chr21	37043739	chr21:37043739:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,0,1:11:0,30,255,15,187,157	0/2:9,0,5:15:42,69,255,0,148,109	0/1:4,5,2:12:124,0,84,64,39,101
+chr21	37044386	chr21:37044386:M	CCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	1/2:0,4,3:7:137,53,34,61,0,52	0/2:3,0,2:5:41,33,71,0,51,72	1/2:0,7,4:11:208,70,39,104,0,92
+chr21	37045161	chr21:37045161:M	TTTTTTTTTGTTGTTTGTTTTTG	<3.3>	.	.	Motif=TTTTGT	GT:AD:DP:PL	1/1:0,47:47:255,141,0	0/1:17,19:36:255,0,255	1/1:0,34:34:255,102,0
+chr21	37045634	chr21:37045634:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,46:51:255,93,0	0/1:18,23:42:255,0,206	1/1:0,33:33:255,97,0
+chr21	37051655	chr21:37051655:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:7,5:12:50,0,84	1/1:1,11:12:174,18,0
+chr21	37052860	chr21:37052860:M	TATATATATAT	<4.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,6:6:107,18,0	0/0:29,1:30:0,71,255	1/1:0,3:3:53,9,0
+chr21	37052870	chr21:37052870:M	TGTGTGTGTATGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:45:255,133,0	0/1:25,15:44:255,0,255	1/1:0,27:31:255,92,0
+chr21	37054515	chr21:37054515:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:28:255,81,0	0/1:11,7:19:75,0,134	0/1:7,11:19:140,0,78
+chr21	37056958	chr21:37056958:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:25:255,69,0	0/1:11,10:24:226,0,230	1/1:0,27:30:255,89,0
+chr21	37061892	chr21:37061892:M	AAAAAAAAAAAAAATAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,21,10:32:255,172,255,255,0,255	1/1:0,28,0:29:255,85,0,255,87,255	2/2:1,0,21:22:255,255,255,47,63,0
+chr21	37066972	chr21:37066972:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,28,26:57:255,255,255,255,0,255	2/2:0,0,19:22:255,255,255,63,63,0	1/1:0,32,0:32:255,96,0,255,96,255
+chr21	37068011	chr21:37068011:M	TTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:1,31:33:255,79,0	1/1:0,40:41:255,120,0
+chr21	37068208	chr21:37068208:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,21:30:255,0,71	1/1:1,32:35:255,84,0	0/0:52,0:52:0,153,255
+chr21	37073316	chr21:37073316:M	GCTGCTGCTGCTGCTGC	<7.7>	.	.	Motif=GCT	GT:AD:DP:PL	1/1:0,21:25:255,63,0	1/1:1,31:35:255,71,0	1/1:0,38:40:255,114,0
+chr21	37075167	chr21:37075167:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	0/1:4,10:14:133,0,29	1/1:1,18:19:255,38,0
+chr21	37076695	chr21:37076695:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:11:255,33,0	1/1:0,9:14:255,36,0	0/0:0,0:1:0,0,0
+chr21	37080369	chr21:37080369:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,31:52:255,0,255	1/1:0,38:38:255,114,0	0/0:46,1:54:0,113,255
+chr21	37081866	chr21:37081866:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:27:255,0,250	0/0:28,0:35:0,93,255	1/1:0,14:15:255,42,0
+chr21	37084992	chr21:37084992:M	CAAACAAACAAACAAACAAAC	<7.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:9,14:24:255,0,175	1/1:0,28:29:255,84,0	0/0:35,0:35:0,105,255
+chr21	37089985	chr21:37089985:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:40:216,0,255	1/1:1,22:24:255,52,0	0/0:35,1:37:0,90,255
+chr21	37090468	chr21:37090468:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,26:49:255,0,255	0/0:26,2:31:0,35,255	1/1:0,44:46:255,135,0
+chr21	37091565	chr21:37091565:M	TTTATTATTTATTTATTTATTTATTTATTTATTT	<7.5>,<10.5>,<11.5>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,18,10,0:32:255,255,237,255,0,255,255,207,255,255	2/3:0,0,3,4:8:203,205,207,73,73,50,62,63,0,42	1/1:0,29,0,0:31:255,89,0,255,90,255,255,90,255,255
+chr21	37093380	chr21:37093380:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:10:73,0,39	0/0:4,0:5:0,14,77	0/1:1,4:5:53,0,2
+chr21	37095138	chr21:37095138:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,5:24:84,0,255	1/1:0,14:17:255,47,0	0/0:28,0:29:0,87,255
+chr21	37101352	chr21:37101352:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,13,0:28:255,0,255,255,255,255	0/1:12,16,2:32:255,0,255,255,171,255	0/2:8,0,16:24:216,255,255,0,142,73
+chr21	37101919	chr21:37101919:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,12:36:253,0,255	1/1:0,2:2:60,6,0	0/0:37,0:37:0,111,255
+chr21	37104589	chr21:37104589:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:5:111,17,14,99,0,98	1/1:0,3,0:3:81,9,0,82,9,84	0/2:1,0,3:4:38,49,99,0,17,5
+chr21	37107077	chr21:37107077:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,17:39:201,0,255	1/1:0,31:34:255,96,0	0/0:23,2:26:0,40,255
+chr21	37115175	chr21:37115175:M	ATAATAATAATAATAATAATAATAATAA	<10.3>,<11.3>,<12.3>	.	.	Motif=ATA	GT:AD:DP:PL	1/3:0,17,0,8:25:255,218,165,255,150,255,255,0,255,255	3/3:0,0,1,11:12:255,255,255,215,214,181,36,33,17,0	1/2:0,12,11,0:23:255,204,138,190,0,157,255,174,222,255
+chr21	37118116	chr21:37118116:M	TTTTTCTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,49:50:255,147,0	1/1:0,37:37:255,109,0	1/1:0,55:55:255,162,0
+chr21	37122405	chr21:37122405:M	ATATATATATATATAATATATATATATATATATTATATATATATATATA	<7.5>,<13>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,3,17:20:255,255,255,76,0,25	2/2:0,0,10:10:255,255,255,30,30,0	1/1:0,5,0:5:140,15,0,140,15,140
+chr21	37122954	chr21:37122954:M	TGTGTGTGTGTGTGTG	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,38:39:255,115,0	1/1:0,37:37:255,111,0
+chr21	37126042	chr21:37126042:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:163,0,163	0/0:32,2:35:0,67,255	1/1:3,28:33:255,42,0
+chr21	37132327	chr21:37132327:M	TTTTTTTTCTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,2,12:24:183,153,255,0,147,117	0/0:33,0,3:36:0,99,255,53,255,255	1/2:0,3,8:11:199,123,114,54,0,22
+chr21	37134449	chr21:37134449:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:194,0,183	0/0:37,0:39:0,114,255	1/1:0,38:38:255,112,0
+chr21	37150054	chr21:37150054:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:37:255,0,174	0/1:19,20:43:255,0,220	1/1:2,35:39:255,78,0
+chr21	37152380	chr21:37152380:M	TTTTTTTTTTTTGTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,6:12:74,0,74	0/0:4,0:5:0,14,80	1/1:0,19:22:255,64,0
+chr21	37156043	chr21:37156043:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,13:30:155,0,231	0/0:41,0:43:0,126,255	1/1:2,38:40:255,81,0
+chr21	37156207	chr21:37156207:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,19:33:255,0,249	0/0:38,0:40:0,119,255	1/1:0,46:46:255,138,0
+chr21	37161104	chr21:37161104:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,24:51:255,0,255	0/0:42,0:44:0,128,255	1/1:1,32:35:255,84,0
+chr21	37164341	chr21:37164341:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:20:98,0,144	0/0:26,2:29:0,50,255	1/1:3,25:32:255,38,0
+chr21	37175100	chr21:37175100:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,9:22:101,0,175	0/0:23,0:24:0,70,255	1/1:2,18:21:255,25,0
+chr21	37175264	chr21:37175264:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,4:6:108,76,92,0,27,12	0/0:6,0,0:6:0,18,177,18,177,177	1/2:0,3,8:11:255,133,102,51,0,18
+chr21	37184630	chr21:37184630:M	TTTTTTTTTTTTTTTTTTT	<18>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,2:6:38,49,108,0,69,101	0/1:11,6,0:18:59,0,132,109,184,255	2/2:0,0,4:4:111,111,111,12,12,0
+chr21	37190121	chr21:37190121:M	TTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	.	.	1/1:0,3:5:102,12,0
+chr21	37192492	chr21:37192492:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,4:16:255,102,65,255,0,255	0/1:11,8,0:20:176,0,255,206,255,255	2/2:0,0,11:11:255,255,255,33,33,0
+chr21	37193366	chr21:37193366:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,21:45:255,255,255,255,0,255	0/1:26,18,0:47:185,0,255,255,255,255	2/2:0,1,41:43:255,255,255,126,108,0
+chr21	37196227	chr21:37196227:M	TTTTTTCTTTCTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:14:104,0,69	0/1:10,5:15:43,0,128	1/1:2,18:20:255,23,0
+chr21	37197755	chr21:37197755:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,11:39:219,0,255	0/0:34,0:36:0,105,255	1/1:1,19:25:255,32,0
+chr21	37198851	chr21:37198851:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,29:54:255,0,255	0/0:38,2:40:0,82,255	1/1:0,49:49:255,145,0
+chr21	37204423	chr21:37204423:M	TGTGTGTGTGTGTGTGTGTGTG	<10>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,28:29:255,85,0	1/1:0,29:30:255,88,0
+chr21	37207073	chr21:37207073:M	AAAAAACAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,39:40:255,99,0	1/1:0,29:29:255,85,0	1/1:1,30:34:255,81,0
+chr21	37212896	chr21:37212896:M	AAAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAG	<7.2>,<13.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:10,3,2:16:46,0,255,57,83,130	0/0:27,1,0:31:0,16,255,71,255,255	1/2:0,4,8:12:154,83,191,92,0,71
+chr21	37212994	chr21:37212994:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:12:21,0,82	0/1:5,2:8:12,0,61	0/0:10,2:15:0,6,149
+chr21	37214385	chr21:37214385:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,1:6:17,23,117,0,85,75	0/0:5,0,0:6:0,18,164,15,150,144	1/2:0,5,3:8:213,52,29,87,0,64
+chr21	37215269	chr21:37215269:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5,0:12:129,0,126,95,132,212	0/0:2,0,0:5:0,14,95,9,76,69	1/2:0,5,3:8:217,52,29,87,0,64
+chr21	37216209	chr21:37216209:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:20:71,0,163	0/0:15,0:16:0,46,255	1/1:2,25:30:255,51,0
+chr21	37229022	chr21:37229022:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,22:39:255,0,207	0/1:14,22:36:255,0,144	0/0:48,1:49:0,126,255
+chr21	37235011	chr21:37235011:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/1:13,15:28:184,0,149	0/0:29,0:31:0,82,255
+chr21	37235852	chr21:37235852:M	TATATATATATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,11:16:255,48,0	1/1:0,9:12:255,24,0	1/1:0,9:13:255,39,0
+chr21	37235880	chr21:37235880:M	TTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:26:183,0,255	1/1:0,10:13:255,37,0	0/1:17,13:32:255,0,255
+chr21	37239604	chr21:37239604:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:144,0,180	0/1:10,9:19:101,0,118	0/1:13,11:26:133,0,160
+chr21	37248335	chr21:37248335:M	GGGGGTGGGGGGAGGGGGGG	<13>	.	.	Motif=G	GT:AD:DP:PL	0/1:7,31:38:255,0,68	0/0:7,0:7:0,21,193	1/1:0,48:48:255,144,0
+chr21	37250900	chr21:37250900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,6:15:66,0,112	0/0:11,0:12:0,35,202	0/1:1,6:9:83,0,5
+chr21	37255852	chr21:37255852:M	TTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:107,14,0	0/1:5,6:15:151,0,116	.
+chr21	37261654	chr21:37261654:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:40:255,0,219	0/1:22,14:37:139,0,255	0/0:42,1:43:0,109,255
+chr21	37274998	chr21:37274998:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.5>,<12.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:7,0,6:14:79,106,255,0,104,98	0/2:7,0,3:10:26,54,190,0,107,98	0/1:8,8,0:16:106,0,104,152,128,255
+chr21	37275958	chr21:37275958:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:27:255,80,0	0/1:20,18:38:209,0,244	1/1:0,38:38:255,112,0
+chr21	37277526	chr21:37277526:M	AAAACAAAAACAAAAACAAAAAACAAACAAACAAAAA	<7>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,29:29:255,87,0	0/1:12,12:24:251,0,251	1/1:0,29:29:255,87,0
+chr21	37278234	chr21:37278234:M	CCCCCCCCCGCCCCCCC	<18>,<20>	.	.	Motif=C	GT:AD:DP:PL	2/2:0,0,7:7:210,206,202,21,21,0	1/2:0,7,3:12:187,89,66,114,0,164	2/2:0,0,5:6:151,147,144,15,15,0
+chr21	37284569	chr21:37284569:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<10.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:0,5:12:120,0,29	0/0:12,0:17:0,19,255	0/1:0,14:28:255,0,0
+chr21	37284597	chr21:37284597:M	TTTTTTTTTTTTTTTTTTTT	<21>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,1:8:56,21,20,36,0,111	0/0:1,0,0:2:0,5,23,6,29,56	1/2:1,7,3:12:159,98,87,71,0,184
+chr21	37293474	chr21:37293474:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:5:18,0,35	1/1:0,5:8:96,9,0	0/1:5,2:7:15,0,68
+chr21	37296540	chr21:37296540:M	TTTTTTTTTTTTTTT	<14>,<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,15,3,9:27:255,248,235,255,110,255,255,0,255,255	1/2:4,14,10,1:29:255,123,238,184,0,255,255,167,255,255	2/3:0,0,3,15:18:255,255,255,255,255,219,46,55,0,1
+chr21	37303361	chr21:37303361:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,1:37:0,90,255	0/1:15,10:26:100,0,188	0/0:33,0:34:0,99,255
+chr21	37308460	chr21:37308460:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:6:27,0,6	0/0:3,0:3:0,8,32	0/0:3,0:3:0,8,32
+chr21	37309286	chr21:37309286:M	TATTTATTTATTTATTTATTTATTTATTTATTATTT	<10>,<11>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,9,0:27:91,0,255,145,255,255	0/2:5,0,8:14:185,140,197,0,90,105	1/1:0,19,0:22:255,46,0,255,61,255
+chr21	37318424	chr21:37318424:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:5:0,15,85	0/0:5,1:6:0,1,65	0/1:1,5:10:77,0,11
+chr21	37318980	chr21:37318980:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,3,11:27:124,145,255,0,148,191	0/1:14,16,0:30:191,0,156,255,204,255	2/2:1,0,22:25:255,255,255,55,71,0
+chr21	37321432	chr21:37321432:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	<6.5>,<8.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:5,16,0:23:255,0,91,255,137,255	0/2:2,0,8:12:209,213,255,0,54,28	1/1:0,21,0:24:255,66,0,255,66,255
+chr21	37321983	chr21:37321983:M	GTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:5,19,12,0:36:255,143,255,255,0,255,255,236,255,255	0/1:9,17,0,0:26:224,0,81,255,132,255,255,157,255,255	2/3:2,0,13,13:28:255,255,255,199,231,154,163,236,0,185
+chr21	37325022	chr21:37325022:M	TCTCTCTCTCTCTCTCTCTCT	<12.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,12:25:201,0,202	0/1:1,22:28:255,0,2	0/0:31,0:34:0,95,255
+chr21	37327340	chr21:37327340:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,6:14:199,71,69,57,0,90	1/2:0,11,7:19:255,111,69,151,0,140	1/2:3,10,5:19:227,45,47,97,0,154
+chr21	37330840	chr21:37330840:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:31:164,0,127	0/1:18,12:32:98,0,188	0/1:25,14:41:101,0,255
+chr21	37331534	chr21:37331534:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,22:47:255,0,255	0/1:15,16:32:192,0,175	0/1:24,17:42:199,0,255
+chr21	37332171	chr21:37332171:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:11:217,52,59,173,0,164	1/2:0,1,1:5:74,16,14,58,0,54	1/2:0,7,2:14:255,43,31,231,0,222
+chr21	37340818	chr21:37340818:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:10,3:14:11,0,137	0/1:7,6:14:74,0,81
+chr21	37341121	chr21:37341121:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,10:33:90,0,246	0/0:24,2:28:0,49,255	0/1:9,8:17:80,0,96
+chr21	37341131	chr21:37341131:M	AAAGAAAGAAAGAAAGAAAG	<4.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:22,6:36:0,5,40	0/0:25,0:26:0,37,96	1/1:0,5:13:42,17,0
+chr21	37345516	chr21:37345516:M	AAATAAATAAATAAATAAATAAAATAAA	<6>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:17,20:37:255,0,219	0/0:40,0:40:0,118,255	1/1:0,41:41:255,121,0
+chr21	37346955	chr21:37346955:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:35:255,0,149	0/0:28,1:31:0,70,255	1/1:2,40:46:255,88,0
+chr21	37352837	chr21:37352837:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:15:212,25,0	0/1:4,5:11:61,0,45	1/1:0,7:7:120,20,0
+chr21	37360872	chr21:37360872:M	CTCTCTCTCTCTCTCTCTCT	<11>	.	.	Motif=CT	GT:AD:DP:PL	0/1:19,22:41:255,0,241	0/0:30,0:30:0,88,255	1/1:0,35:36:255,103,0
+chr21	37362853	chr21:37362853:M	AAAAAAAAAAAAAAGGAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,6:18:63,0,141	0/1:9,5:17:56,0,105	0/0:27,1:28:0,65,255
+chr21	37372278	chr21:37372278:M	AAAAAACAAAACAAAACAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:21:255,62,0	0/1:10,13:23:163,0,110	1/1:0,20:20:255,59,0
+chr21	37372449	chr21:37372449:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:19:151,0,71	0/0:22,2:25:0,29,255	1/1:2,19:21:255,27,0
+chr21	37375520	chr21:37375520:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:48,9,0	1/1:0,4:5:80,14,0	1/1:0,0:1:1,1,0
+chr21	37383833	chr21:37383833:M	GTGTATGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,10:26:194,0,255	0/0:35,0:37:0,110,255	1/1:0,27:27:255,81,0
+chr21	37388101	chr21:37388101:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2,0:5:74,1,0,56,5,59	1/2:1,10,4:16:255,50,90,254,0,250	0/1:2,1,0:4:33,0,52,34,35,61
+chr21	37388655	chr21:37388655:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,21:35:255,0,151	0/1:16,18:34:221,0,185	0/0:29,2:31:0,55,255
+chr21	37389039	chr21:37389039:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,3:20:0,10,226	0/0:40,1:41:0,103,255	1/1:0,4:4:64,12,0
+chr21	37389914	chr21:37389914:M	TTTTGTTTTTTGTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,11:30:110,0,235	0/1:9,8:18:93,0,102	0/0:24,0:25:0,73,255
+chr21	37394227	chr21:37394227:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,20:37:255,0,207	0/0:38,2:41:0,85,255	1/1:1,40:41:255,103,0
+chr21	37396521	chr21:37396521:M	TTTTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,35:36:255,88,0	0/1:22,14:38:149,0,255	1/1:2,43:45:255,96,0
+chr21	37398077	chr21:37398077:M	ATATATATATATATTTATATTTATATATTTTTGTATATTTTATATTTATATATGTGTATATATATATAT	<33>,<34>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,6,2:17:75,0,120,54,37,71	.	0/2:10,0,6:17:5,48,236,0,77,32
+chr21	37398344	chr21:37398344:M	AAAAAAAAAAAAATAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,1:50:0,129,255	0/1:11,14:25:172,0,120	0/0:23,0:23:0,68,255
+chr21	37398905	chr21:37398905:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,8:20:173,0,211	0/1:13,11:26:226,0,255	0/0:25,0:31:0,71,255
+chr21	37401483	chr21:37401483:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,10:24:111,0,183	0/1:10,8:18:85,0,119	0/0:20,0:21:0,61,255
+chr21	37403635	chr21:37403635:M	AAAAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,18:27:255,219,146,84,0,5	0/1:12,5,0:22:81,0,255,23,255,255	2/2:0,1,29:31:255,255,255,82,71,0
+chr21	37403664	chr21:37403664:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,12:25:255,142,68,149,0,77	0/1:4,7,0:13:172,0,90,86,109,174	2/2:0,4,25:29:255,255,235,87,33,0
+chr21	37408006	chr21:37408006:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,19:43:230,0,255	0/0:45,0:45:0,132,255	1/1:1,42:43:255,109,0
+chr21	37417494	chr21:37417494:M	TTTTTTATTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:10:228,29,0	1/1:1,8:9:181,3,0	.
+chr21	37426755	chr21:37426755:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:230,38,0	0/1:6,6:12:69,0,69	1/1:1,13:15:223,26,0
+chr21	37433045	chr21:37433045:M	ATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,17:35:233,0,189	0/0:19,1:20:0,41,255	1/1:3,21:25:255,16,0
+chr21	37440131	chr21:37440131:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,0,0	.	0/1:1,3:5:85,0,15
+chr21	37441963	chr21:37441963:M	TTTTTTTTTTTTTT	<12>,<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,21,4,1:49:255,0,255,255,255,255,255,255,255,255	2/3:0,1,15,8:26:255,255,255,148,212,177,255,244,0,255	0/0:38,0,0,1:39:0,117,255,115,255,255,97,255,255,255
+chr21	37446582	chr21:37446582:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:27:255,42,0	0/1:21,17:42:196,0,255	1/1:2,27:30:255,52,0
+chr21	37451346	chr21:37451346:M	CTCCGTCCCTCCATCCCTCCCTCCCTCCATCCCTCCC	<11.5>	.	.	Motif=CTCC	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/1:10,5:15:79,0,207	0/0:23,0:23:0,69,255
+chr21	37452758	chr21:37452758:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	0/1:2,4:7:91,0,38	1/1:1,15:21:255,28,0
+chr21	37454086	chr21:37454086:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,0,0	1/1:0,6:6:163,18,0	.
+chr21	37455020	chr21:37455020:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,6:12:194,88,75,43,0,51	0/0:5,1,0:8:0,6,90,20,107,166	0/2:3,3,6:12:145,59,78,0,7,58
+chr21	37457014	chr21:37457014:M	TTACTTACTTACTTACTTACTTACTTA	<1.8>,<8.8>	.	.	Motif=TTAC	GT:AD:DP:PL	0/2:6,0,6:19:95,124,255,0,144,122	0/1:4,8,0:14:172,0,95,190,106,255	0/2:2,0,17:26:255,255,255,0,72,5
+chr21	37457038	chr21:37457038:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<8.8>,<9.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:16,0,8:24:147,128,255,0,255,255	1/2:0,6,7:13:255,110,73,95,0,57	0/0:17,0,0:17:0,51,255,51,255,255
+chr21	37458269	chr21:37458269:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<22.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,16,0,0:18:255,54,0,255,54,255,255,54,255,255	1/3:0,13,0,8:22:255,222,180,255,132,255,255,0,255,255	1/2:0,14,8,0:25:255,229,183,255,0,255,255,145,255,255
+chr21	37463204	chr21:37463204:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<14>,<20>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,19,22,0:42:255,255,255,255,0,255,255,255,255,255	2/3:0,0,12,9:23:255,255,255,255,255,255,207,255,0,255	1/1:0,24,0,0:24:255,72,0,255,72,255,255,72,255,255
+chr21	37467102	chr21:37467102:M	AAAAGAAAAAAAAAAAAAAACAAAACAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:26:255,58,0	1/1:0,17:17:255,50,0	1/1:0,23:24:255,70,0
+chr21	37476819	chr21:37476819:M	CCCCCCCCCCCC	<13>,<14>	.	.	Motif=C	GT:AD:DP:PL	0/0:14,1,0:15:0,26,239,42,255,255	0/2:4,4,18:26:255,250,248,0,9,45	0/1:7,4,0:13:34,0,108,60,138,246
+chr21	37484330	chr21:37484330:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14:15:255,44,0	0/1:10,7:18:68,0,128	1/1:1,12:13:195,20,0
+chr21	37489634	chr21:37489634:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:36:255,67,0	0/1:15,11:27:231,0,255	1/1:1,30:40:255,58,0
+chr21	37494946	chr21:37494946:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,27:29:255,48,0	1/1:0,24:25:255,73,0	1/1:1,38:40:255,99,0
+chr21	37495153	chr21:37495153:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<21>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,26,0:27:255,81,0,255,81,255	1/2:0,17,8:27:255,225,170,255,0,255	1/1:0,19,0:19:255,57,0,255,57,255
+chr21	37512925	chr21:37512925:M	TTTTTTTTTTTTCTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,13:29:255,181,158,252,0,188	0/1:9,6,0:16:136,0,206,110,151,222	2/2:1,0,22:23:255,255,255,50,67,0
+chr21	37526664	chr21:37526664:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,22:25:255,19,0	0/1:12,3:15:8,0,163	1/1:1,16:19:255,37,0
+chr21	37529451	chr21:37529451:M	TGGATGGATGGATGGATGGA	<3>,<4>	.	.	Motif=TGGA	GT:AD:DP:PL	1/1:0,11,1:15:255,41,0,191,28,156	0/0:12,0,0:12:0,36,255,33,181,149	1/2:0,7,5:14:210,51,24,104,0,69
+chr21	37537906	chr21:37537906:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<13.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10,0:11:255,32,0,225,32,199	1/2:0,8,11:19:255,166,142,142,0,88	1/1:0,12,0:13:255,39,0,255,38,233
+chr21	37545384	chr21:37545384:M	TAAATAAATAAATAAAGTAATAAATA	<5.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:20,16:36:255,0,255	0/1:16,17:33:255,0,255	0/0:35,0:35:0,105,255
+chr21	37545510	chr21:37545510:M	TGTGTGTGTGTGTG	<6>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,107,0	0/1:14,27:41:255,0,134	1/1:0,42:42:255,124,0
+chr21	37563876	chr21:37563876:M	CGTCCCCGTCCGCGTCCGC	<4.2>	.	.	Motif=CGTCCG	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:34,0:34:0,102,255	0/1:18,14:32:255,0,255
+chr21	37565447	chr21:37565447:M	CTTTCTTTCTTTCCTTTCTTCCTTCCTTTTTTTTTTCTTT	<6.5>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:19,7:30:136,0,255	0/1:11,5:18:83,0,255	0/1:16,3:29:71,0,255
+chr21	37565473	chr21:37565473:M	TTTTTTTTTTCTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:10:0,29,164	0/1:5,2:7:12,0,61	0/1:9,3:12:15,0,115
+chr21	37567973	chr21:37567973:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:135,0,154	0/0:14,0:15:0,44,254	0/1:10,9:19:106,0,124
+chr21	37572299	chr21:37572299:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:47,0,47	0/0:6,1:7:0,4,84	0/1:5,1:6:0,0,69
+chr21	37579027	chr21:37579027:M	TTTTTGTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,17:26:238,0,88	0/0:14,1:15:0,27,226	0/1:10,9:21:101,0,134
+chr21	37581954	chr21:37581954:M	AAAAAAAAACAAAAAACAAAAACAAAAA	<4.3>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,44:44:255,132,0	1/1:0,38:38:255,114,0
+chr21	37585793	chr21:37585793:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/0:35,2:39:0,78,255	0/1:28,31:59:255,0,255
+chr21	37597085	chr21:37597085:M	TTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:32:0,76,255	0/0:33,1:38:0,73,255	0/1:13,5:20:122,0,255
+chr21	37607464	chr21:37607464:M	ATATATATATATATATATAT	<15.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,6:10:255,70,40,47,0,18	0/2:7,0,2:11:44,31,223,0,199,191	0/1:10,2,0:15:50,0,244,44,255,255
+chr21	37612725	chr21:37612725:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:22:255,65,0	0/1:2,8:16:225,0,20	0/1:6,14:26:255,0,82
+chr21	37614360	chr21:37614360:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:27,0:27:0,79,255	0/1:12,9:22:103,0,135	0/1:16,10:26:97,0,197
+chr21	37614751	chr21:37614751:M	TGTGTGTGTATGCATGTGTCTGTGTGTATGTGTGTGTGTATGCATGTGTCTGTGTGTGTATTTGTGTGTATGTGTGTGTGT	<34>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:9:91,0,84	0/0:3,0:4:0,9,79	0/0:6,0:6:0,18,158
+chr21	37615245	chr21:37615245:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	.	1/1:0,7:7:195,21,0
+chr21	37616591	chr21:37616591:M	ATATATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,6:12:130,11,0	1/1:0,8:11:164,30,0	1/1:0,0:3:0,0,0
+chr21	37617170	chr21:37617170:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	<10.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,3:4:100,9,0	1/1:0,4:5:124,12,0	0/0:0,0:4:0,1,2
+chr21	37626131	chr21:37626131:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,13,13:29:255,193,159,160,0,181	0/2:22,2,13:38:255,194,255,0,255,255	0/1:19,18,0:39:212,0,253,255,255,255
+chr21	37630135	chr21:37630135:M	TGTGTGTGTGTGTGTGTGTGTGTGGTGT	<18>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,5:19:255,131,90,255,0,255	0/2:14,0,8:24:181,223,255,0,255,255	0/1:17,12,0:30:255,0,255,255,255,255
+chr21	37634762	chr21:37634762:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:10,13:26:173,0,110	0/1:16,19:37:246,0,191
+chr21	37645018	chr21:37645018:M	TTTTTTTTTTTTTTTTTT	<14>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,7:16:146,176,255,0,210,186	1/2:0,10,3:14:255,76,58,255,0,251	0/1:7,11,0:25:255,0,166,255,185,255
+chr21	37649921	chr21:37649921:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11,2:13:255,33,0,204,1,169	1/1:0,23,0:24:255,72,0,255,70,255	1/2:0,13,8:22:255,123,82,241,0,183
+chr21	37654106	chr21:37654106:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,10:16:119,0,10	0/1:3,2:9:26,0,42	0/1:6,1:9:1,0,74
+chr21	37654415	chr21:37654415:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:34:0,100,255	0/1:25,17:47:173,0,255	0/1:21,18:44:205,0,255
+chr21	37655180	chr21:37655180:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<19>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,3,12:18:255,135,89,48,13,0	1/2:0,3,3:9:160,29,11,29,0,11	1/2:0,9,7:16:255,70,22,88,0,40
+chr21	37655225	chr21:37655225:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<18.5>,<22.5>,<23.5>	.	.	Motif=GA	GT:AD:DP:PL	1/3:0,8,0,5:15:255,147,123,255,76,255,210,0,208,192	2/3:0,0,3,8:12:255,255,255,106,106,70,52,52,0,17	1/2:0,10,11,1:23:255,255,255,255,0,226,255,141,249,255
+chr21	37661799	chr21:37661799:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:32:255,95,0	1/1:0,29:29:255,85,0	1/1:0,42:42:255,124,0
+chr21	37663464	chr21:37663464:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,46:47:255,120,0	0/1:22,23:45:255,0,255	0/1:18,36:55:255,0,186
+chr21	37664793	chr21:37664793:M	TTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,2:7:189,35,14,87,0,67	0/1:2,4,1:9:106,0,47,41,36,85	1/2:1,3,8:14:237,91,105,7,0,18
+chr21	37669569	chr21:37669569:M	TGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,10:27:255,255,233,255,0,255	0/1:9,20,0:32:255,0,66,255,159,255	0/2:12,0,11:25:252,255,255,0,220,255
+chr21	37677690	chr21:37677690:M	TCCATCCATTTATCCATTCATTCAATCCATCCATCCATCCA	<33.8>	.	.	Motif=TCCA	GT:AD:DP:PL	0/1:19,10:29:37,0,255	0/0:16,5:21:0,1,255	0/0:22,4:26:0,29,255
+chr21	37677771	chr21:37677771:M	TCCATCCATCCATCCATCCACCCACCTATCCACCCACCCATCCA	<33.8>	.	.	Motif=TCCA	GT:AD:DP:PL	1/1:0,10:10:122,28,0	1/1:0,5:5:61,14,0	1/1:0,4:4:49,11,0
+chr21	37684349	chr21:37684349:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:255,0,200	1/1:2,27:32:255,57,0	0/1:9,25:42:255,0,124
+chr21	37688121	chr21:37688121:M	TTCTTCTTCTT	<2.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:20,19:39:253,0,255	0/1:18,24:42:255,0,203	0/0:62,0:62:0,183,255
+chr21	37690770	chr21:37690770:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:17:0,14,236	0/1:11,10:22:117,0,125	0/1:4,8:13:114,0,33
+chr21	37698699	chr21:37698699:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,7:21:67,0,187	1/1:2,17:19:255,21,0	0/1:7,4:12:38,0,100
+chr21	37701396	chr21:37701396:M	TGTGTGTGTGTGTGTG	<9>,<10>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,21,13:34:255,249,153,255,0,255	0/2:24,0,21:47:255,255,255,0,255,255	0/1:18,15,0:34:186,0,243,243,255,255
+chr21	37702235	chr21:37702235:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:7:118,0,11	1/1:0,1:1:27,3,0	0/1:1,3:6:73,0,16
+chr21	37704661	chr21:37704661:M	TCATCATCATCATCATCATCATCATC	<9.7>,<10.7>	.	.	Motif=TCA	GT:AD:DP:PL	1/2:0,15,12:27:255,224,148,241,0,205	0/2:20,0,10:30:199,174,255,0,255,255	1/1:0,27,0:27:255,80,0,255,80,255
+chr21	37709147	chr21:37709147:M	AAAGGAAAGGAA	<2.6>	.	.	Motif=AAAGG	GT:AD:DP:PL	0/1:30,19:49:255,0,255	0/0:40,0:40:0,120,255	1/1:0,44:44:255,132,0
+chr21	37709515	chr21:37709515:M	AAAAAAAAGAAAAGAAAAGAAAAGAAA	<6.4>,<7.6>	.	.	Motif=AAAAG	GT:AD:DP:PL	1/1:0,13,0:13:254,39,0,255,39,255	2/2:0,0,12:12:255,255,255,36,36,0	1/1:0,31,0:31:255,92,0,255,93,255
+chr21	37716380	chr21:37716380:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:27:140,0,192	0/0:27,1:32:0,76,255	0/1:4,20:27:255,0,2
+chr21	37720693	chr21:37720693:M	TTTTCTTTTCTTTTTTTTTTTTTTTT	<24>,<25>,<27>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,2,5,3:10:144,96,119,54,45,60,112,55,0,152	1/3:1,6,0,3:10:183,35,74,138,81,164,146,0,101,156	2/2:2,1,13,0:16:211,190,241,11,29,0,252,255,42,255
+chr21	37727459	chr21:37727459:M	GTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:1,24:25:255,56,0	1/1:2,23:25:255,36,0
+chr21	37728699	chr21:37728699:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:21,16:39:255,0,255	0/0:25,0:28:0,80,255	1/1:2,39:43:255,72,0
+chr21	37731101	chr21:37731101:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTG	<17>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,21:21:255,255,255,62,63,0	1/2:0,11,6:20:255,113,123,213,0,255	2/2:0,0,32:32:255,255,255,94,96,0
+chr21	37737463	chr21:37737463:M	GTTTGTTTGTTT	<2>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:29,16:45:158,0,255	0/0:48,0:48:0,142,255
+chr21	37739914	chr21:37739914:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,29:59:255,0,255	1/1:1,35:38:255,81,0	0/1:32,26:59:255,0,255
+chr21	37745073	chr21:37745073:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<14>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16,0:17:255,48,0,255,39,255	2/2:0,0,3:4:98,98,98,12,12,0	1/1:0,13,1:15:255,42,0,255,17,255
+chr21	37764384	chr21:37764384:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:21:255,53,0	0/1:15,8:27:142,0,255	1/1:0,18:23:255,57,0
+chr21	37769413	chr21:37769413:M	TTATTATTATTATTATTATTATTATTATTATTA	<9>,<10>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,15,19:34:255,255,255,255,0,190	0/2:3,0,6:9:82,92,170,0,54,28	1/2:0,15,16:31:255,255,210,255,0,191
+chr21	37796767	chr21:37796767:M	CTTTCTTTCTTTCTTT	<6.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:10,6:16:126,0,246	0/0:14,0:14:0,42,255	1/1:0,9:14:255,26,0
+chr21	37814897	chr21:37814897:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3:14:11,0,150	0/0:11,1:14:0,2,143	0/1:3,8:13:120,0,13
+chr21	37818194	chr21:37818194:M	GTGTGTGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>,<27>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,9,4:16:255,43,91,242,0,255	2/2:2,0,17:20:255,255,255,24,60,0	1/1:0,9,0:12:255,30,0,255,30,255
+chr21	37819247	chr21:37819247:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,25:36:255,0,101	0/0:48,2:51:0,114,255	0/1:30,27:57:255,0,255
+chr21	37819800	chr21:37819800:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:26:255,68,0	1/1:0,27:32:255,94,0	0/1:13,14:30:255,0,255
+chr21	37826612	chr21:37826612:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:40:239,0,255	0/1:30,22:52:237,0,255	0/0:41,0:41:0,121,255
+chr21	37835805	chr21:37835805:M	ACCCTAACCCTAACCCTAACCCTAACCCTAACCCT	<4.8>	.	.	Motif=ACCCTA	GT:AD:DP:PL	0/1:6,19:25:255,0,42	0/0:26,0:26:0,77,255	0/1:15,17:32:226,0,188
+chr21	37837714	chr21:37837714:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,17:40:232,0,250	0/0:26,1:27:0,61,255	0/1:19,17:36:206,0,242
+chr21	37844065	chr21:37844065:M	TTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,10,0:35:182,0,255,185,255,255	0/0:33,0,0:35:0,105,255,105,255,255	1/2:0,9,10:19:255,180,126,161,0,108
+chr21	37846354	chr21:37846354:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<19>,<20>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,9,0,0:16:255,255,240,178,0,151,255,157,177,255,255,247,167,255,255	2/4:0,0,12,1,5:18:255,255,255,141,141,102,255,255,123,255,255,255,0,184,255	1/3:0,8,0,12,0:21:255,255,255,255,196,255,229,0,217,192,255,255,255,229,255
+chr21	37847391	chr21:37847391:M	CTGCACCTGCAC	<1.8>	.	.	Motif=CTGCAC	GT:AD:DP:PL	1/1:0,25:26:255,72,0	1/1:0,21:21:255,58,0	1/1:0,23:23:255,64,0
+chr21	37850958	chr21:37850958:M	ATTGATTGATTGATT	<2.8>	.	.	Motif=ATTG	GT:AD:DP:PL	1/1:0,5:6:76,17,0	0/0:28,2:30:0,58,255	0/0:25,1:26:0,60,255
+chr21	37851900	chr21:37851900:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,11:31:115,0,255	0/0:30,1:33:0,79,255	0/1:22,16:38:181,0,255
+chr21	37853146	chr21:37853146:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:15:81,0,99	0/1:20,11:34:99,0,255	0/0:32,1:37:0,89,255
+chr21	37853836	chr21:37853836:M	ATATATATATGTATATATATATATATA	<16.5>,<20.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,16,6:23:255,175,127,255,0,255	2/2:0,0,1:1:31,31,31,3,3,0	0/1:9,7,0:16:167,0,216,194,237,255
+chr21	37859488	chr21:37859488:M	TATATATATATATATATATATATATATATATATATATATATATA	<13>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:5:146,15,0	.	1/1:0,2:2:60,6,0
+chr21	37863847	chr21:37863847:M	TTTTTTTTTTTTTGTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,11:13:255,36,0	1/1:0,5:8:154,18,0
+chr21	37864114	chr21:37864114:M	TTTTTTTTTTTTGTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:133,0,255	0/1:20,17:38:193,0,244	0/1:24,14:40:139,0,255
+chr21	37864862	chr21:37864862:M	TCTCTCTCTCT	<7.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,15:33:255,0,255	0/1:16,11:32:179,0,255	0/1:18,16:38:255,0,255
+chr21	37864872	chr21:37864872:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:26:82,0,120	0/1:10,5:17:26,0,95	0/1:11,12:29:89,0,121
+chr21	37878265	chr21:37878265:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:39:0,95,255	0/0:39,0:40:0,117,255	0/1:17,19:38:249,0,204
+chr21	37879715	chr21:37879715:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,10,0:24:255,0,136,175,148,255	0/2:4,3,6:15:141,36,121,0,53,54	0/1:6,6,0:18:156,0,146,90,127,185
+chr21	37880101	chr21:37880101:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:27:237,0,255	0/1:16,10:28:202,0,255	1/1:0,17:22:255,54,0
+chr21	37881471	chr21:37881471:M	GAGAGAGAGAGAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	0/1:18,13:32:163,0,250	0/1:13,18:31:233,0,142	1/1:0,37:43:255,122,0
+chr21	37891265	chr21:37891265:M	ACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:51,0:51:0,153,255	0/0:43,0:43:0,129,255	0/1:19,14:33:255,0,255
+chr21	37898583	chr21:37898583:M	AAAAGAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:13:0,38,236	0/1:14,15:30:172,0,164	0/0:21,0:24:0,69,255
+chr21	37903723	chr21:37903723:M	AAAAACAAAACAAAACAAAACAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:33,0:33:0,97,255	0/1:18,14:33:170,0,237
+chr21	37914009	chr21:37914009:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<24.5>,<25.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,2,4:8:173,141,127,70,68,49,26,20,0,3	2/3:0,0,3,5:8:188,146,128,61,59,38,37,29,0,14	1/3:0,3,0,6:9:186,133,113,99,70,82,35,0,34,43
+chr21	37914917	chr21:37914917:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,84,255	0/0:39,3:43:0,73,255	0/1:19,21:40:255,0,225
+chr21	37922389	chr21:37922389:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1:35:0,84,255	0/0:26,2:28:0,47,255	0/1:22,13:38:130,0,255
+chr21	37930956	chr21:37930956:M	GTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:27:0,81,255	0/0:28,0:29:0,87,255	0/1:14,9:24:178,0,255
+chr21	37939632	chr21:37939632:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,45:47:255,102,0	1/1:3,48:53:255,92,0	1/1:1,62:68:255,170,0
+chr21	37943341	chr21:37943341:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:13:40,0,102	0/1:7,6:13:62,0,79	0/1:10,5:16:49,0,125
+chr21	37955096	chr21:37955096:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:26,16:42:175,0,255	0/0:37,0:42:0,122,255	0/1:28,18:48:190,0,255
+chr21	37966370	chr21:37966370:M	CACACACACACACACACACACACACACACA	<19>	.	.	Motif=CA	GT:AD:DP:PL	0/0:32,0:34:0,99,255	0/1:16,16:35:255,0,255	0/0:29,0:31:0,93,255
+chr21	37970197	chr21:37970197:M	TGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTG	<30>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,13:13:223,38,0	1/1:1,5:10:66,1,0	1/1:1,6:7:84,4,0
+chr21	37980924	chr21:37980924:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:30:0,87,255	0/1:17,31:55:255,0,255	0/0:28,0:29:0,87,255
+chr21	37981360	chr21:37981360:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:73,0,1	1/1:0,1:1:17,3,0	0/0:2,0:4:0,2,37
+chr21	37987430	chr21:37987430:M	TATGTATGTATGTATGTATGTATGTATGCATGCATGCGTGTGTGTGTGTATGTATGTATGTATGTATGTATGTAT	<12.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:3,0:3:0,9,87	1/1:0,3:5:111,15,0	0/0:6,0:7:0,18,173
+chr21	37987502	chr21:37987502:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<13.2>,<14.2>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,0,12:12:255,209,175,36,34,0	1/2:0,9,8:18:255,112,62,127,0,87	2/2:0,0,22:22:255,255,255,66,63,0
+chr21	37987932	chr21:37987932:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:41:255,121,0	0/1:21,27:50:255,0,236	1/1:0,42:44:255,129,0
+chr21	37990432	chr21:37990432:M	AGGAAGGAAGGAAGGAAGGA	<4>	.	.	Motif=AGGA	GT:AD:DP:PL	1/1:0,13:13:167,36,0	0/0:14,3:17:0,9,139	1/1:0,6:6:77,17,0
+chr21	37990451	chr21:37990451:M	AGAAAGAAAAGAAAAAGAAAGAAGAAAG	<11>,<11.5>	.	.	Motif=AGAA	GT:AD:DP:PL	1/1:0,16,4:20:255,60,0,229,1,169	0/1:13,4,1:19:102,0,255,42,255,255	1/2:0,12,5:18:255,72,21,171,0,120
+chr21	37993413	chr21:37993413:M	TGTGTGTGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,42:45:255,127,0	0/1:23,13:38:92,0,205	1/1:0,44:44:255,125,0
+chr21	37993429	chr21:37993429:M	TATATATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,25:36:255,20,0	0/0:29,5:37:0,33,255	0/1:15,14:37:103,0,150
+chr21	38011592	chr21:38011592:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:22:255,51,0	0/1:9,6:20:127,0,218	1/1:0,16:19:255,53,0
+chr21	38022063	chr21:38022063:M	ACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/0:21,0:22:0,64,255	0/1:8,7:15:76,0,93	0/0:31,0:33:0,96,255
+chr21	38023059	chr21:38023059:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,5:21:40,0,195	0/0:22,0:22:0,64,255	0/1:4,3:8:30,0,58
+chr21	38026017	chr21:38026017:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:68,9,0	1/1:0,3:3:87,9,0	.
+chr21	38028769	chr21:38028769:M	AGGAGAAGGAGGAGGAGGAGGTGGTGGTGGAGGAGGAGGAGGAGGAGGA	<14.3>	.	.	Motif=AGG	GT:AD:DP:PL	0/0:5,0:6:0,6,124	0/0:2,0:2:0,6,58	0/1:6,9:16:199,0,123
+chr21	38034812	chr21:38034812:M	AAATAAATAAATAAATAAAT	<4>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:11,5:17:37,0,136	0/0:38,0:38:0,110,255	0/0:11,2:13:0,5,148
+chr21	38037800	chr21:38037800:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTG	<13>,<17>,<18>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,15,9,0:24:255,241,196,255,0,255,255,149,255,255	2/3:0,0,16,14:30:255,255,255,225,226,139,255,255,0,171	0/1:15,17,0,0:33:255,0,255,255,255,255,255,255,255,255
+chr21	38053207	chr21:38053207:M	CACACACACACACACACACACACACACACACAC	<14.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,7:16:255,183,161,212,0,210	0/2:15,0,7:25:130,188,255,0,255,255	0/1:9,15,0:25:255,0,178,255,226,255
+chr21	38074884	chr21:38074884:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:32:92,0,251	0/0:27,1:32:0,74,255	0/1:16,15:34:167,0,183
+chr21	38075752	chr21:38075752:M	AAAAAAAAAAAAAAAGAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:118,0,92	0/1:10,9:23:100,0,105	0/0:15,2:19:0,22,230
+chr21	38077058	chr21:38077058:M	ACACACACACACACACACACACACACACACACACTCACACACAC	<23>,<24>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/3:8,0,0,13:22:255,255,255,216,255,255,0,133,212,180	1/3:0,9,1,2:12:185,54,24,137,18,129,146,0,130,224	0/2:7,0,11,0:18:255,178,244,0,113,148,179,255,186,255
+chr21	38088584	chr21:38088584:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:37:255,0,188	0/1:12,17:31:219,0,128	0/0:28,1:30:0,70,255
+chr21	38091632	chr21:38091632:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,10:31:92,0,255	0/1:16,9:26:80,0,202	0/0:18,1:20:0,41,255
+chr21	38099746	chr21:38099746:M	TTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,17:24:245,0,39	0/1:7,11:22:153,0,67	0/0:18,3:23:0,14,255
+chr21	38100079	chr21:38100079:M	AAAAAAAAAGAAAAAGAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,11:27:130,0,215	0/1:13,12:25:142,0,160	0/0:39,0:39:0,115,255
+chr21	38103743	chr21:38103743:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,8:31:130,0,255	0/1:15,9:27:177,0,255	0/0:34,0:36:0,105,255
+chr21	38106141	chr21:38106141:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:90,17,0	1/1:0,4:4:58,11,0	1/1:1,8:9:104,11,0
+chr21	38108213	chr21:38108213:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,11:24:255,193,246,229,0,255	1/2:3,11,5:19:175,40,93,143,0,255	2/2:4,0,27:31:255,255,255,21,81,0
+chr21	38112872	chr21:38112872:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:127,0,108	0/1:6,8:15:96,0,71	0/0:28,2:30:0,52,255
+chr21	38115945	chr21:38115945:M	TACTACTACTA	<2.7>	.	.	Motif=TAC	GT:AD:DP:PL	0/1:24,7:31:46,0,255	0/1:22,8:30:60,0,255	0/0:43,0:43:0,127,255
+chr21	38116882	chr21:38116882:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,16:24:223,0,76	0/1:9,10:21:116,0,106	0/0:16,1:20:0,40,255
+chr21	38122819	chr21:38122819:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,19:34:255,0,255	0/1:14,17:33:255,0,255	0/0:43,0:45:0,134,255
+chr21	38124727	chr21:38124727:M	AAAAAAAAAAGGAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,20:37:255,0,212	0/1:17,21:38:255,0,191	0/0:37,0:37:0,109,255
+chr21	38126691	chr21:38126691:M	ACACACACACACACACACACACACAC	<16>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,13:28:255,0,255	0/1:20,10:30:246,0,255	0/0:32,0:33:0,99,255
+chr21	38133687	chr21:38133687:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:11,20:32:255,0,113	1/1:0,19:23:255,19,0	0/0:39,0:40:0,117,255
+chr21	38137397	chr21:38137397:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,13:22:255,0,106	0/1:12,7:22:132,0,255	0/0:26,1:31:0,56,255
+chr21	38147210	chr21:38147210:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20:36:255,0,176	0/1:8,16:25:204,0,76	0/0:24,0:24:0,71,255
+chr21	38149138	chr21:38149138:M	ACACACACACACGCACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:4,29:33:255,27,0	1/1:0,29:29:255,85,0
+chr21	38163737	chr21:38163737:M	CTTCTCCTTCTTCTTCATCTCTGTCTTTTTCTTCTCTTCTTC	<13>	.	.	Motif=CTT	GT:AD:DP:PL	0/1:10,8:18:57,0,82	0/1:8,7:15:50,0,61	0/0:28,0:28:0,78,255
+chr21	38172637	chr21:38172637:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:9:36,0,64	0/1:7,7:17:74,0,92	0/0:10,1:11:0,15,159
+chr21	38182537	chr21:38182537:M	GAGAGAGAGAGAGAGAGAGAGAAAAAGAGAGAGAGAAAAAAAAGAGAGAGAGAGAGA	<26.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:10,8:19:167,0,217	0/1:12,9:22:185,0,255	0/0:24,0:24:0,72,255
+chr21	38187742	chr21:38187742:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,35:60:255,0,255	0/1:19,23:42:255,0,216	0/0:59,0:59:0,174,255
+chr21	38193147	chr21:38193147:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,23,159	0/1:15,5:20:26,0,195	0/1:17,3:21:0,0,235
+chr21	38193799	chr21:38193799:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,2:26:0,30,255	0/0:14,2:17:0,16,210	0/1:9,4:14:29,0,122
+chr21	38202389	chr21:38202389:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,24:51:255,0,255	0/1:35,28:63:255,0,255	0/0:52,2:54:0,121,255
+chr21	38211838	chr21:38211838:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:38:189,0,255	0/0:39,1:41:0,102,255	0/0:41,0:43:0,126,255
+chr21	38232138	chr21:38232138:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,15:37:193,0,251	0/1:23,17:42:189,0,255	0/0:41,1:43:0,105,255
+chr21	38237950	chr21:38237950:M	AACAACAACAAGAACAACA	<8.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:20,18:38:255,0,255	0/1:21,19:40:255,0,255	0/0:29,0:29:0,87,255
+chr21	38241968	chr21:38241968:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:8:49,0,30	0/1:1,1:2:11,0,11	0/1:6,1:9:11,0,77
+chr21	38256361	chr21:38256361:M	TATATATATATATATATATAATAT	<14>,<18>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,25,3:29:255,81,6,255,0,255	1/1:0,12,0:14:255,36,0,255,24,255	2/2:0,0,5:7:167,167,167,18,18,0
+chr21	38268551	chr21:38268551:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<28>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,4:21:255,48,77,255,0,255	2/2:1,0,5:7:72,90,164,5,20,0	1/1:0,11,0:13:255,36,0,255,36,255
+chr21	38277028	chr21:38277028:M	TGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,42:42:255,126,0	1/1:0,44:44:255,132,0	1/1:0,31:33:255,96,0
+chr21	38304059	chr21:38304059:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,37:39:255,77,0	1/1:1,42:43:255,109,0	1/1:2,41:46:255,98,0
+chr21	38306372	chr21:38306372:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,111,0	1/1:0,36:38:255,111,0	1/1:0,38:39:255,114,0
+chr21	38316512	chr21:38316512:M	ATATATATATATATGAAATATATATATATTTCTATATATAT	<19.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,5:5:91,15,0	1/1:0,17:17:255,50,0
+chr21	38319388	chr21:38319388:M	ACACACACACA	<4.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:3:39,8,0	1/1:0,4:4:51,11,0	1/1:0,3:3:39,8,0
+chr21	38327939	chr21:38327939:M	AAAGAAAGAAAGAAAGAAAGAAAG	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:29,0:34:0,90,255	0/0:25,0:27:0,77,255	0/1:20,21:43:255,0,255
+chr21	38334621	chr21:38334621:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,20:33:255,0,124	0/1:13,12:26:134,0,162	0/0:20,3:25:0,16,255
+chr21	38354650	chr21:38354650:M	ACACACACACACACACACAC	<11>,<12>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,22,0:35:255,0,148,255,247,255	0/2:17,2,13:32:255,201,255,0,255,255	0/1:20,13,1:34:156,0,255,189,255,255
+chr21	38356732	chr21:38356732:M	CACACACACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,14:33:179,0,255	0/0:30,0:31:0,88,255	0/1:16,10:27:112,0,232
+chr21	38386790	chr21:38386790:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,4:54:212,0,255	0/1:22,20:44:253,0,255	0/1:20,2:56:255,0,215
+chr21	38391956	chr21:38391956:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,19:39:242,0,255	0/1:18,14:33:151,0,237	0/1:23,20:43:239,0,255
+chr21	38397597	chr21:38397597:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,1,1:4:12,3,23,3,0,22	1/2:0,3,1:4:53,16,15,48,0,72	2/2:0,0,3:3:50,58,84,9,9,0
+chr21	38402713	chr21:38402713:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:13:35,0,59	0/0:9,0:9:0,25,119	1/1:3,9:16:124,4,0
+chr21	38406155	chr21:38406155:M	AAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,4:7:147,19,0	1/1:0,5:7:174,21,0
+chr21	38407635	chr21:38407635:M	TATATATATATTTAATGTATATTATATGTATACTATATATCACCTATATATAATATAT	<32>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:11:255,32,0	1/1:0,2:3:68,9,0	1/1:0,6:7:193,21,0
+chr21	38418271	chr21:38418271:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,21,0:24:255,71,0,255,70,255	1/2:0,11,11:23:255,192,125,201,0,137	1/1:0,18,0:22:255,53,0,255,62,255
+chr21	38418928	chr21:38418928:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:7:81,12,0	1/1:0,0:1:2,1,0	1/1:0,4:8:139,19,0
+chr21	38419509	chr21:38419509:M	ATACACATACACACACACA	<3.5>	.	.	Motif=ATACAC	GT:AD:DP:PL	1/1:1,39:40:255,93,0	1/1:0,33:34:255,99,0	1/1:0,32:32:255,96,0
+chr21	38420032	chr21:38420032:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:39:0,116,255	0/1:16,10:27:188,0,255	0/0:39,0:43:0,122,255
+chr21	38420289	chr21:38420289:M	TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,28:30:255,69,0	0/1:11,19:31:255,0,107	0/1:12,15:27:199,0,144
+chr21	38423085	chr21:38423085:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:8,13:21:166,0,79	0/1:7,9:18:119,0,65	0/0:17,2:19:0,21,255
+chr21	38423982	chr21:38423982:M	AAAAGAAAAGAAAAGAAAAGAAA	<5.6>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:18,17:35:226,0,245	0/1:21,14:35:152,0,255	0/1:23,18:41:218,0,255
+chr21	38426770	chr21:38426770:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,239	0/0:26,0:26:0,76,255	0/1:14,20:35:255,0,167
+chr21	38426931	chr21:38426931:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,100,0	1/1:1,36:37:255,91,0	1/1:1,30:32:255,76,0
+chr21	38429348	chr21:38429348:M	ACATATACATATATAATATGTACACATATACATATA	<2.7>	.	.	Motif=ACATAT	GT:AD:DP:PL	0/1:23,6:37:205,0,255	0/1:13,2:16:52,0,255	0/1:15,12:32:255,0,255
+chr21	38429655	chr21:38429655:M	ATATATACATATATGTGTATATATGTATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,1:1:40,3,0	.	1/1:0,4:4:156,12,0
+chr21	38429747	chr21:38429747:M	ACACACACACACACACACCACA	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,41,1:44:255,126,0,255,111,255	1/2:0,21,15:39:255,238,127,255,0,175	1/1:1,38,0:42:255,95,0,255,94,255
+chr21	38430080	chr21:38430080:M	TATTTTTTTTTTATTTTTA	<3>	.	.	Motif=TATTTT	GT:AD:DP:PL	0/1:13,11:24:189,0,237	0/0:35,0:35:0,105,255	0/1:14,21:35:255,0,228
+chr21	38436013	chr21:38436013:M	TTTTTTTCTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:99,0,97	0/1:8,4:13:43,0,100	0/1:7,8:16:96,0,88
+chr21	38436881	chr21:38436881:M	TTTTTTTTTTCTTTCTCTCTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,16:23:226,0,52	0/0:14,1:15:0,27,227	0/1:9,10:19:124,0,106
+chr21	38440788	chr21:38440788:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	3/3:0,0,0,4:7:128,128,128,124,124,121,13,13,13,0	1/1:0,8,0,0:11:255,27,0,255,27,249,255,27,255,255	2/3:0,0,5,4:9:255,251,247,112,112,92,134,130,0,118
+chr21	38444727	chr21:38444727:M	AAAAAAAAAAAAAA	<12>,<13>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	3/4:0,0,0,12,8:21:255,255,255,255,255,255,154,155,155,97,188,221,220,0,161	1/3:1,10,0,5,1:18:255,79,128,255,147,255,255,0,179,255,255,78,251,255,255	2/4:0,1,13,0,12:26:255,255,255,255,255,255,255,255,215,255,240,214,0,255,255
+chr21	38445116	chr21:38445116:M	CTTTCTTTCTTTCTTTCTT	<3.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:19,0:21:0,31,255	0/0:28,0:28:0,82,255	0/1:11,8:23:120,0,141
+chr21	38446227	chr21:38446227:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:3,0:4:0,9,88	1/1:0,31:32:255,96,0
+chr21	38448003	chr21:38448003:M	AGTATTAGTATT	<1.8>	.	.	Motif=AGTATT	GT:AD:DP:PL	0/0:47,0:47:0,141,255	0/1:16,23:39:255,0,255	0/1:26,24:50:255,0,255
+chr21	38450206	chr21:38450206:M	AAAAAAAAAACAAAGAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:26:255,58,0	1/1:0,19:20:255,58,0	1/1:0,31:31:255,91,0
+chr21	38453883	chr21:38453883:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:255,33,0	0/1:4,3:9:56,0,95	0/1:12,5:18:83,0,255
+chr21	38455095	chr21:38455095:M	TTTCTTTCTTTCTTTCTTTCTTTCTTT	<6.2>,<6.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,22,0:29:181,58,0,129,38,94	1/2:0,9,14:25:86,39,16,35,0,1	1/2:0,13,11:28:107,34,4,52,0,16
+chr21	38455119	chr21:38455119:M	TTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,24:28:255,255,255,48,66,0	1/2:0,21,9:30:255,221,170,255,0,255	1/2:0,19,12:32:255,255,255,255,0,255
+chr21	38456587	chr21:38456587:M	ATCCCCATCCCCATC	<2.8>	.	.	Motif=ATCCCC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,34:34:255,102,0	1/1:0,45:45:255,135,0
+chr21	38457436	chr21:38457436:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,2,22:26:255,255,255,39,39,0	1/2:0,17,17:35:255,248,194,255,0,205	1/2:0,14,9:23:255,136,94,248,0,184
+chr21	38458424	chr21:38458424:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,9,157	0/1:2,3:5:67,0,39	0/1:4,4:10:87,0,90
+chr21	38466301	chr21:38466301:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,9:25:255,229,169,255,0,255	1/2:0,8,7:16:255,169,132,209,0,176	2/2:0,1,14:18:255,255,255,50,19,0
+chr21	38468983	chr21:38468983:M	AAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:16:255,47,0	1/1:0,16:19:255,54,0	1/1:0,16:16:255,48,0
+chr21	38470258	chr21:38470258:M	TATTATTATTATTATTATTATTATTGTTATAATTAT	<11>	.	.	Motif=TAT	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,19:19:255,56,0	1/1:0,33:33:255,97,0
+chr21	38473160	chr21:38473160:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,48,0	1/1:0,10:13:255,33,0	1/1:0,12:16:255,44,0
+chr21	38473795	chr21:38473795:M	TGTGTGTGTGTGTGTATGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,18:19:187,40,0	0/1:9,6:16:33,0,53	1/1:5,16:21:121,2,0
+chr21	38473836	chr21:38473836:M	ATGTGTATGTGTACATGTTTGCGTATGTATGCATGTGTATGTGTGAGCGTATGTGTGTGTAAGTGTTGTATATGTGTGTATGTGTGTGTATATGTATGTGT	<11.5>	.	.	Motif=ATGTGT	GT:AD:DP:PL	1/1:0,8:9:209,27,0	1/1:0,10:10:243,30,0	1/1:0,11:11:255,33,0
+chr21	38474732	chr21:38474732:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,36:40:255,114,0	1/1:0,39:40:255,117,0
+chr21	38476984	chr21:38476984:M	TTCTTTTTTCTTTTCTTTCTTTC	<6.2>	.	.	Motif=TTCT	GT:AD:DP:PL	1/1:0,11:11:228,33,0	1/1:0,11:12:227,33,0	1/1:0,23:23:255,68,0
+chr21	38485462	chr21:38485462:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:208,23,0	0/1:3,9:13:126,0,14	1/1:1,11:14:194,22,0
+chr21	38487121	chr21:38487121:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:30:255,53,0	1/1:1,16:17:255,32,0	1/1:0,20:22:255,64,0
+chr21	38491207	chr21:38491207:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,26:32:255,20,0	1/1:1,20:25:255,45,0	1/1:0,20:24:255,67,0
+chr21	38503369	chr21:38503369:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,37:42:255,67,0	1/1:2,33:37:255,72,0	1/1:1,38:40:255,99,0
+chr21	38507527	chr21:38507527:M	TGAATGAGTGAATGAATGAATGAATGAATGAATGAA	<10>,<11>	.	.	Motif=TGAA	GT:AD:DP:PL	1/2:0,9,8:17:255,153,106,149,0,125	1/2:0,9,15:24:255,255,203,139,0,94	1/2:0,14,12:26:255,223,151,225,0,189
+chr21	38507950	chr21:38507950:M	CACACACACGCACATGCACACACACAGAGACACACAGACACACACACATGCACACACACAGAGACACACAAACACACA	<8>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,3:3:84,9,0	1/1:0,4:6:112,12,0	0/1:4,1:7:11,0,99
+chr21	38513130	chr21:38513130:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:1,36:37:255,91,0	1/1:1,43:45:255,114,0
+chr21	38513139	chr21:38513139:M	AATAATAATAATA	<4.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:40,1:41:0,92,255	0/0:46,0:47:0,115,255	0/1:23,23:46:86,0,86
+chr21	38518237	chr21:38518237:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>,<12.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,7:19:255,113,77,224,0,172	2/2:1,0,18:19:255,255,255,38,56,0	0/1:7,12,0:19:255,0,147,218,126,255
+chr21	38520033	chr21:38520033:M	AACAAAAACAAAAA	<2.5>	.	.	Motif=AACAAA	GT:AD:DP:PL	1/1:0,29:30:255,89,0	0/1:25,17:43:243,0,255	1/1:0,49:50:255,148,0
+chr21	38537442	chr21:38537442:M	ATATATATATATATGTATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:48,0:49:0,144,255	0/0:31,0:31:0,93,255	0/1:26,22:49:255,0,255
+chr21	38539894	chr21:38539894:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,8,46	0/0:7,0:8:0,23,130	0/1:2,6:10:86,0,16
+chr21	38541913	chr21:38541913:M	AAATTAAATTAAATT	<4>	.	.	Motif=AAATT	GT:AD:DP:PL	0/1:17,10:27:114,0,250	0/0:43,0:43:0,127,255	0/1:20,19:39:243,0,255
+chr21	38543738	chr21:38543738:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:18:128,0,149	0/0:9,0:10:0,27,239	0/0:14,0:19:0,37,255
+chr21	38548451	chr21:38548451:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:20:89,0,163	0/1:17,5:22:23,0,232	0/0:35,1:39:0,95,255
+chr21	38548615	chr21:38548615:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:124,12,0	0/0:0,0:2:0,3,14	0/1:2,1:5:28,0,62
+chr21	38552847	chr21:38552847:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,1,3:21:43,46,255,0,250,255	0/0:36,1,0:38:0,94,255,111,255,255	1/2:1,14,8:24:255,131,83,189,0,188
+chr21	38555327	chr21:38555327:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,15:36:176,0,255	0/0:45,0:45:0,132,255	0/1:20,18:40:231,0,249
+chr21	38559384	chr21:38559384:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,0:5:5,0,22	1/1:0,0:3:5,2,0	0/1:5,4:10:35,0,63
+chr21	38572193	chr21:38572193:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:7:125,21,0	0/1:2,6:9:85,0,8	0/1:10,5:19:34,0,156
+chr21	38579826	chr21:38579826:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:22:38,0,234	0/0:19,0:20:0,58,255	0/1:11,6:18:57,0,158
+chr21	38586177	chr21:38586177:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<9.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,20:20:255,255,255,60,60,0	1/2:0,8,1:10:255,28,1,255,0,255	2/2:0,0,2:4:104,103,103,9,8,0
+chr21	38587361	chr21:38587361:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:28:175,0,175	0/1:4,14:18:191,0,17	1/1:2,16:18:252,17,0
+chr21	38592572	chr21:38592572:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>,<16>,<19>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,9,0,8:18:255,144,191,255,221,255,255,0,255,237	2/3:0,0,14,10:24:255,255,255,171,255,232,255,255,0,255	1/1:0,37,0,0:38:255,114,0,255,114,255,255,114,255,255
+chr21	38596057	chr21:38596057:M	GGGGGGGGGGGG	<10>,<11>	.	.	Motif=G	GT:AD:DP:PL	0/2:7,0,2:9:10,31,206,0,124,101	0/2:16,2,9:27:100,96,255,0,238,198	1/1:0,7,0:7:197,21,0,143,21,124
+chr21	38597473	chr21:38597473:M	ACACACACACACACACACACACACACACGCACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,21,4:26:255,97,30,255,0,255	1/1:0,28,0:29:255,83,0,255,84,255	2/2:0,0,24:26:255,255,255,78,72,0
+chr21	38610527	chr21:38610527:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:17,12:30:119,0,205	0/0:37,1:38:0,94,255
+chr21	38619327	chr21:38619327:M	TCCTCATCCTCCTCCTCTCTATTCCTCTTGCTCCCTCCCCTCATCCTCCTCCTC	<5.7>	.	.	Motif=TCC	GT:AD:DP:PL	0/1:12,11:23:208,0,222	0/1:11,8:19:140,0,211	0/1:21,13:34:218,0,255
+chr21	38627944	chr21:38627944:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,6:19:54,0,176	1/1:2,8:15:133,2,0	0/0:23,0:24:0,68,255
+chr21	38633879	chr21:38633879:M	AAAAAAAAAAAAA	<14>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,12,0,9:21:255,246,208,255,166,255,223,0,222,255	2/3:0,2,14,13:32:255,255,255,254,223,174,247,174,0,179	1/1:4,33,2,1:40:255,41,0,255,68,255,255,83,255,255
+chr21	38646280	chr21:38646280:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:44,0,62	0/1:6,4:12:44,0,70	0/0:12,0:14:0,40,224
+chr21	38660031	chr21:38660031:M	GGAAAGGAAAGG	<1.2>	.	.	Motif=GGAAA	GT:AD:DP:PL	0/0:23,0:23:0,69,255	0/0:50,0:50:0,150,255	0/1:13,12:25:255,0,255
+chr21	38662293	chr21:38662293:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,17:29:244,0,122	0/1:12,13:26:155,0,146	0/1:18,17:35:209,0,228
+chr21	38663352	chr21:38663352:M	GAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/0:34,0:34:0,102,255	0/1:19,10:30:184,0,255
+chr21	38671906	chr21:38671906:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/0:34,4:38:0,42,255	0/1:19,12:34:136,0,250
+chr21	38673768	chr21:38673768:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:9,12:21:169,0,112	0/1:7,20:27:255,0,48	0/1:9,17:26:242,0,93
+chr21	38675358	chr21:38675358:M	AAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:21,0,21	0/1:5,3:9:56,0,117	0/1:8,1:11:1,0,198
+chr21	38685288	chr21:38685288:M	AAATAAATAAATAAATAAATAAATAAATAAATAA	<9.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:18,0:18:0,53,255	0/1:13,10:23:120,0,177
+chr21	38692825	chr21:38692825:M	AAAAAAAAGAAAGGAAAAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,47,0	0/1:3,7:13:93,0,34	0/1:9,11:22:149,0,97
+chr21	38703696	chr21:38703696:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,10:30:107,0,227	0/1:7,5:15:44,0,107	0/1:16,6:24:40,0,228
+chr21	38707309	chr21:38707309:M	ATATATATATATATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13:16:255,41,0	1/1:0,6:7:175,21,0	1/1:0,10:10:255,30,0
+chr21	38707403	chr21:38707403:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,14:25:203,0,106	0/1:5,10:15:138,0,47	0/1:11,20:31:255,0,115
+chr21	38711058	chr21:38711058:M	AAAAAAAATAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:42:255,0,255	0/1:22,9:32:164,0,255	0/1:14,21:35:255,0,255
+chr21	38713078	chr21:38713078:M	GGGGGGAGGGGGGGGCGGGGGGGGGG	<27>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:50,9,0	0/1:1,1:2:10,0,10	1/1:0,2:3:33,6,0
+chr21	38718363	chr21:38718363:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:97,0,31	0/1:12,9:21:94,0,147	0/1:12,8:20:85,0,156
+chr21	38724538	chr21:38724538:M	GATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<11.5>,<14.5>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:15,5,0:25:63,0,234,116,152,255	0/1:10,8,0:22:123,0,139,172,103,255	1/2:1,10,9:24:235,76,176,195,0,238
+chr21	38724617	chr21:38724617:M	AGCTAGCTAGCTA	<4.2>	.	.	Motif=AGCT	GT:AD:DP:PL	0/1:18,24:42:255,0,255	0/1:17,10:27:200,0,255	0/1:21,32:53:255,0,255
+chr21	38726735	chr21:38726735:M	TTTCTTTTTCTTTTCTTT	<2.2>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:33,11:46:161,0,255	0/1:36,10:51:122,0,255	0/1:45,16:63:240,0,255
+chr21	38732116	chr21:38732116:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:2:0,6,28	0/1:2,3:5:34,0,18	0/1:1,1:2:11,0,11
+chr21	38733539	chr21:38733539:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<42>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/1:10,13:23:255,0,205	0/0:24,0:24:0,72,255
+chr21	38735929	chr21:38735929:M	AAAAAAAAAAGAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,97,0	1/1:1,27:28:255,65,0	0/1:25,22:47:255,0,255
+chr21	38737615	chr21:38737615:M	AAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAATAAAAAAAAAAAGAAAA	<56>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:173,21,0	1/1:0,3:3:82,9,0	0/1:5,5:14:104,0,124
+chr21	38757606	chr21:38757606:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:4,8:12:123,0,42	0/1:7,9:16:119,0,80	0/1:10,15:25:212,0,115
+chr21	38762099	chr21:38762099:M	TTTTTTTTTTTTTCTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:24:99,0,211	1/1:3,33:37:255,55,0	0/1:12,19:32:255,0,126
+chr21	38773030	chr21:38773030:M	AAGAAGAGAAGGCAAGAAGAAGAAGAAGAA	<9>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,26:26:255,77,0	0/1:13,18:31:236,0,144	1/1:0,38:38:255,112,0
+chr21	38781316	chr21:38781316:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,3:4:67,0,15
+chr21	38793516	chr21:38793516:M	TTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:27:255,69,0	0/1:13,16:34:255,0,255	1/1:1,17:23:255,38,0
+chr21	38799325	chr21:38799325:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:49:255,145,0	0/1:23,20:43:232,0,255	1/1:0,54:54:255,159,0
+chr21	38799673	chr21:38799673:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,32:35:255,65,0	0/1:17,12:31:125,0,235	1/1:1,25:26:255,58,0
+chr21	38807418	chr21:38807418:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,7:12:209,102,86,41,0,46	0/1:6,2,1:11:17,0,74,11,82,157	1/2:1,2,3:8:100,49,49,12,0,23
+chr21	38808580	chr21:38808580:M	GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGTGTGTGT	<27.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,5:5:135,15,0	0/1:6,7:15:148,0,129	1/1:0,16:16:255,48,0
+chr21	38812782	chr21:38812782:M	AATAATAATAATAATAAT	<5>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,25:25:255,74,0	0/1:22,16:38:178,0,255	1/1:0,31:31:255,92,0
+chr21	38815171	chr21:38815171:M	TGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,27,0:29:255,66,0,255,84,255	0/1:22,12,0:38:115,0,255,213,255,255	1/2:0,11,15:26:255,255,255,199,0,240
+chr21	38834774	chr21:38834774:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/0:22,0:23:0,67,255	0/1:21,27:49:255,0,241
+chr21	38836215	chr21:38836215:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:25:0,74,255	0/1:20,17:37:255,0,255	0/0:31,0:31:0,93,255
+chr21	38836788	chr21:38836788:M	AAGAAGAAGAAGA	<3.7>	.	.	Motif=AAG	GT:AD:DP:PL	0/0:13,0:13:0,39,255	0/1:8,3:11:49,0,191	0/0:21,0:21:0,63,255
+chr21	38837711	chr21:38837711:M	ACACACATACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:12,4:16:23,0,163	0/1:8,10:18:115,0,81	0/0:23,1:24:0,53,255
+chr21	38848893	chr21:38848893:M	TTTTTTCTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41:42:255,105,0	0/1:16,18:34:214,0,181	1/1:4,28:33:255,25,0
+chr21	38854557	chr21:38854557:M	AGAAAAGAACAGAAAA	<3.4>	.	.	Motif=AGAAA	GT:AD:DP:PL	1/1:0,46:46:255,138,0	0/1:19,17:36:255,0,255	1/1:0,48:48:255,144,0
+chr21	38866716	chr21:38866716:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:12:54,0,90	0/1:2,4:6:51,0,17	0/0:20,0:21:0,61,255
+chr21	38867617	chr21:38867617:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<12>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,7,10:17:255,165,144,133,0,86	1/2:0,6,8:14:255,123,105,108,0,68	2/2:0,0,15:15:255,255,255,44,44,0
+chr21	38870270	chr21:38870270:M	TGTGTGTGCGTGCATGTGTGTGTGTGTTTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,0:29:0,85,255	0/0:25,0:25:0,74,255	0/1:13,14:27:182,0,163
+chr21	38874621	chr21:38874621:M	AAAAAAAAAATAAAAAATAAAAAATAAAATAAAATAAAA	<40>,<50>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,6:18:255,153,117,225,0,255	1/1:2,12,0:14:180,6,0,219,41,255	1/2:0,15,5:20:255,124,80,255,0,255
+chr21	38878438	chr21:38878438:M	AAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:28,2,23:55:255,255,255,0,255,255	2/2:0,1,30:34:255,255,255,90,70,0	0/1:17,29,0:46:255,0,176,255,255,255
+chr21	38886454	chr21:38886454:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,3:37:0,52,255	0/0:38,3:42:0,70,255	0/1:19,17:38:211,0,246
+chr21	38904148	chr21:38904148:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,12,0:29:255,180,255,226,0,255,255,255,255,255	1/1:0,23,0,0:25:255,73,0,255,75,255,255,75,255,255	2/3:0,0,11,6:17:255,255,255,164,164,131,190,255,0,255
+chr21	38905111	chr21:38905111:M	TAGATAGAAAGATAGATAGATAGATAGATAGACAGATAGATAGATAGAT	<33.8>	.	.	Motif=TAGA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:21,0:21:0,63,255	0/1:20,7:27:6,0,255
+chr21	38908412	chr21:38908412:M	TTCCCATTCCCAT	<1.7>	.	.	Motif=TTCCCA	GT:AD:DP:PL	0/0:35,1:36:0,81,255	0/1:18,6:24:89,0,255	0/0:38,0:38:0,114,255
+chr21	38911271	chr21:38911271:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:28,0:28:0,82,255	0/1:10,16:26:222,0,110
+chr21	38915411	chr21:38915411:M	ATATATATATATATATATATATA	<9.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,28,6:37:255,92,0,255,32,255	1/1:0,19,6:28:255,66,0,249,9,175	1/2:0,20,30:50:255,255,198,221,0,87
+chr21	38916606	chr21:38916606:M	TTTGTTTGTTTGTTT	<2.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:29,0:29:0,85,255	0/1:31,16:47:163,0,255
+chr21	38917678	chr21:38917678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:25:255,54,0	1/1:1,23:24:255,53,0	1/1:1,36:37:255,91,0
+chr21	38920349	chr21:38920349:M	TTTTTTTTTCTTTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:18:255,54,0	1/1:0,18:19:255,57,0	1/1:0,2:4:76,11,0
+chr21	38924493	chr21:38924493:M	AAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:6:128,17,0	1/1:0,5:6:148,18,0	1/1:0,8:8:219,24,0
+chr21	38931367	chr21:38931367:M	AACAACAACAA	<4.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,32:33:255,89,0	1/1:0,33:34:255,102,0
+chr21	38934489	chr21:38934489:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,17:20:255,3,0	0/1:4,16:21:227,0,9	1/1:1,16:17:255,32,0
+chr21	38963875	chr21:38963875:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<25>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,1,1:2:38,38,38,12,12,9,27,27,0,24	2/3:0,0,4,3:7:142,142,142,35,35,23,106,106,0,98	1/1:0,5,0,0:5:146,15,0,146,15,146,146,15,146,146
+chr21	38965049	chr21:38965049:M	AAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,1,1	0/0:0,0:1:0,0,0	1/1:0,7:11:229,16,0
+chr21	38966587	chr21:38966587:M	CCCCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,19:23:255,66,0	1/1:0,11:11:255,33,0	1/1:0,7:7:181,21,0
+chr21	38967399	chr21:38967399:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:3:2,1,0	1/1:0,0:2:2,1,0	1/1:0,7:9:229,24,0
+chr21	38973998	chr21:38973998:M	CTCTCTCTCTCTCTTTCTCTCTCTCTCTCT	<16>	.	.	Motif=CT	GT:AD:DP:PL	0/0:24,0:25:0,74,255	0/0:26,0:28:0,82,255	0/1:16,11:29:126,0,219
+chr21	38982396	chr21:38982396:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,25:37:255,0,75	0/1:12,17:30:211,0,117	0/1:16,13:32:154,0,198
+chr21	38986349	chr21:38986349:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:20:0,56,255	0/1:4,7:12:161,0,75	0/0:16,0:19:0,54,255
+chr21	38994771	chr21:38994771:M	TCTCTGTCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTGTGTGTCTCTCTGTCTCCCCTCTCCCTCTCTCTCTCTGTCTCTC	<10>,<30.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,3,1:6:188,40,31,148,0,142	0/0:1,0,0:1:0,3,28,3,28,28	1/2:0,6,8:14:255,200,182,255,0,255
+chr21	38997796	chr21:38997796:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,23,14:39:255,255,161,255,0,255	2/2:1,2,22:27:255,255,255,46,33,0	1/1:3,40,5:49:255,86,0,255,51,255
+chr21	39001725	chr21:39001725:M	TAAAAAAAAAAAAAAAAATACATAAAATAAAATAAAA	<7.6>,<7.8>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:4,4,2:11:65,0,48,21,32,115	1/2:1,6,3:10:157,38,29,80,0,95	0/0:13,0,0:15:0,43,255,44,255,255
+chr21	39015385	chr21:39015385:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:18:101,0,103	1/1:0,12:13:213,37,0	0/1:14,11:26:118,0,182
+chr21	39016706	chr21:39016706:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,19:20:255,57,0	1/1:0,21:23:255,66,0
+chr21	39019459	chr21:39019459:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,25:26:255,58,0	1/1:0,31:32:255,94,0	1/1:2,38:40:255,81,0
+chr21	39034634	chr21:39034634:M	AAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:57,6,0	0/1:1,4:6:91,0,13	1/1:0,3:3:85,9,0
+chr21	39045357	chr21:39045357:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:19:0,56,255	0/0:16,1:19:0,38,255	0/1:7,6:15:72,0,88
+chr21	39047035	chr21:39047035:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,20,0,0:32:255,0,87,255,153,255,255,180,255,255	1/2:1,14,11,0:27:255,171,243,229,0,255,255,189,255,255	0/3:10,2,3,7:23:161,173,255,87,200,224,0,147,149,255
+chr21	39049544	chr21:39049544:M	ACACACACACACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:24,0:27:0,80,255	0/1:15,3:23:50,0,255	0/1:17,9:28:180,0,255
+chr21	39052506	chr21:39052506:M	ACACATACACATATACACACACATACATACACACACA	<14.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,17:27:255,255,255,255,0,205	1/2:0,3,7:11:249,175,170,77,0,56	2/2:0,0,21:22:255,255,255,63,63,0
+chr21	39058140	chr21:39058140:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:25:113,0,187	1/1:1,21:23:255,50,0	0/1:18,8:29:64,0,254
+chr21	39060531	chr21:39060531:M	ACACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,12:33:225,0,255	1/1:0,26:27:255,78,0	0/1:21,5:28:54,0,255
+chr21	39060676	chr21:39060676:M	ACACACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,12:28:255,0,255	1/1:0,27:28:255,81,0	0/1:22,22:44:255,0,255
+chr21	39064037	chr21:39064037:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:255,0,255	1/1:0,30:36:255,95,0	0/1:7,10:18:221,0,137
+chr21	39064072	chr21:39064072:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:18,12:30:142,0,255	1/1:0,23:23:255,68,0	0/1:18,20:38:255,0,221
+chr21	39070888	chr21:39070888:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:2,48:50:255,109,0	1/1:0,35:35:255,103,0	1/1:0,41:41:255,121,0
+chr21	39081684	chr21:39081684:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:15:170,0,10	0/1:2,8:11:114,0,2	1/1:0,18:19:255,55,0
+chr21	39084771	chr21:39084771:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,4:8:154,59,47,68,0,47	0/2:2,0,1:3:8,14,64,0,33,25	0/2:1,0,4:5:54,57,83,0,17,3
+chr21	39086583	chr21:39086583:M	AAAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,99,0	0/1:5,19:25:255,0,73	0/1:9,18:29:255,0,173
+chr21	39092788	chr21:39092788:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,8:14:177,127,221,73,0,117	0/2:13,3,8:24:67,86,255,0,132,198	0/1:7,9,0:17:124,0,72,172,102,255
+chr21	39095165	chr21:39095165:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:123,0,115	0/1:6,4:13:49,0,76	0/0:17,1:21:0,43,255
+chr21	39102175	chr21:39102175:M	ACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,1,5,5:11:255,205,188,131,116,113,126,68,0,120	1/3:0,5,0,4:11:172,105,99,162,103,168,72,0,81,126	1/2:0,4,5,0:9:188,85,59,57,0,42,200,85,68,240
+chr21	39105744	chr21:39105744:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23:39:255,0,184	0/1:15,14:31:177,0,175	0/0:42,1:45:0,113,255
+chr21	39112639	chr21:39112639:M	AAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,7,0:25:62,0,234,125,255,255	0/1:19,10,0:31:81,0,255,170,255,255	1/2:2,11,16:31:255,255,255,159,0,236
+chr21	39119685	chr21:39119685:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:6:36,0,36	0/1:3,1:4:5,0,39	0/1:10,4:14:29,0,135
+chr21	39125067	chr21:39125067:M	GTGTGTGTGTGTGTGTGTGTGT	<14>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,16:31:255,255,255,255,0,255	1/2:0,15,16:32:255,255,255,255,0,255	1/2:0,18,12:33:255,255,255,255,0,255
+chr21	39125915	chr21:39125915:M	ACACACCAGACACACACACCACACTGACACACACACACACACACACACA	<21.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,7,7:14:255,133,195,211,0,190	1/2:1,4,7:12:206,108,214,103,0,98	1/2:2,8,5:16:255,57,133,203,0,219
+chr21	39127478	chr21:39127478:M	TTTTTTTTTTGTTTTGTTTTGTTTTTTTT	<30>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,13:21:255,255,255,71,0,131	1/2:0,7,8:17:255,200,188,109,0,155	0/2:10,0,5:18:104,139,255,0,191,255
+chr21	39132692	chr21:39132692:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:5:69,43,40,17,0,6	1/2:0,4,3:7:142,41,29,65,0,46	0/0:1,0,0:1:0,3,29,3,20,17
+chr21	39136482	chr21:39136482:M	ATATATATATATATATATATATAT	<10>,<11>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,13:29:255,208,160,255,0,212	1/2:2,19,11:33:255,131,122,255,0,255	0/1:13,18,1:33:255,0,255,255,227,255
+chr21	39139981	chr21:39139981:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:31:255,72,0	1/1:0,20:20:255,59,0	0/1:10,18:32:252,0,98
+chr21	39143087	chr21:39143087:M	CTTCCCCTTCACCTTC	<2.8>	.	.	Motif=CTTCAC	GT:AD:DP:PL	0/1:18,18:36:255,0,255	0/1:11,13:24:250,0,200	0/1:19,25:44:255,0,255
+chr21	39149578	chr21:39149578:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,16,20:37:255,255,255,255,0,194	1/2:1,19,14:34:255,194,162,255,0,240	2/2:2,0,26:29:255,255,255,38,82,0
+chr21	39158201	chr21:39158201:M	AAAAAAAAAAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:30:0,88,255	0/0:29,1:33:0,78,255	0/1:18,9:28:84,0,252
+chr21	39158396	chr21:39158396:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:49,3,0	0/1:3,6:11:77,0,18	1/1:0,1:1:16,3,0
+chr21	39158840	chr21:39158840:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:9,0,19	0/1:1,2:3:24,0,8	0/1:8,3:11:19,0,104
+chr21	39166413	chr21:39166413:M	TTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:14:255,32,0	1/1:0,4:9:154,17,0	0/0:0,0:3:0,1,3
+chr21	39185296	chr21:39185296:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:137,0,16	1/1:0,2:3:71,9,0	1/1:0,1:3:56,9,0
+chr21	39185709	chr21:39185709:M	AAAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,24:37:255,255,255,0,255,255	0/2:20,1,24:46:255,255,255,0,255,255	1/2:0,23,26:49:255,255,255,255,0,255
+chr21	39195743	chr21:39195743:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:40:255,0,224	0/1:18,21:42:255,0,209	0/1:17,21:41:255,0,193
+chr21	39207452	chr21:39207452:M	ACACACACACACACACACACACACACACACACA	<20.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:14,0,3:20:31,74,255,0,255,255	0/2:6,0,10:16:231,236,255,0,155,125	1/1:0,8,0:10:237,27,0,219,18,209
+chr21	39208979	chr21:39208979:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:38:0,83,255	0/0:27,1:31:0,70,255	0/1:22,9:36:80,0,255
+chr21	39214870	chr21:39214870:M	TTTTTTTTTCCTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:99,0,99	0/1:13,14:28:163,0,146	1/1:1,16:18:255,35,0
+chr21	39217011	chr21:39217011:M	ATATATATATATATATATATATATAAATATATATATATATTTATATATATATATATATATATATATATATATAT	<15.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,0:5:20,20,19,5,5,0	2/2:0,0,0:1:0,0,0,0,0,0	1/2:0,6,12:20:255,255,206,122,0,67
+chr21	39217084	chr21:39217084:M	TTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,7,58	0/0:0,0:1:0,2,4	1/1:0,12:14:255,39,0
+chr21	39221155	chr21:39221155:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,16,164	0/0:8,1:14:0,20,160	0/1:7,4:13:42,0,96
+chr21	39238286	chr21:39238286:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:17:76,0,111	0/1:12,12:29:160,0,120	1/1:2,16:22:255,26,0
+chr21	39240901	chr21:39240901:M	TTTTTTTTTTTGTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:28:0,82,255	0/0:33,1:34:0,82,255	0/1:13,8:22:85,0,177
+chr21	39244922	chr21:39244922:M	ATATATATATATATATATATATAT	<9>,<14>	.	.	Motif=AT	GT:AD:DP:PL	0/2:14,0,14:31:255,255,255,0,255,255	0/0:9,0,0:11:0,30,255,30,255,255	1/2:0,13,4:18:255,105,66,255,0,255
+chr21	39245590	chr21:39245590:M	TTTTTTTTTTGGTTTTTTTTTTTTTTT	<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,4,11:23:174,96,255,0,61,70	0/2:19,1,12:32:124,156,255,0,255,233	1/2:0,10,11:21:255,163,133,174,0,115
+chr21	39248642	chr21:39248642:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>,<26>,<34>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6,0:10:245,155,143,90,0,72,245,155,90,245	1/2:0,1,2,0:6:102,64,59,37,0,28,102,64,37,102	2/3:0,0,3,3:8:173,173,173,87,87,76,86,86,0,74
+chr21	39249916	chr21:39249916:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>,<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,17,0,0:31:255,0,255,255,255,255,255,225,255,255	0/2:9,0,22,1:36:255,255,255,0,255,216,255,255,129,255	1/3:0,9,1,9:22:255,162,223,255,238,255,255,0,148,248
+chr21	39252250	chr21:39252250:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:10:0,2,197	0/1:13,3:16:31,0,255	0/1:8,4:13:70,0,182
+chr21	39257203	chr21:39257203:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:26:0,50,255	0/0:21,3:26:0,21,255	0/1:12,14:28:176,0,140
+chr21	39264429	chr21:39264429:M	AAAAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:16,0,9:26:95,158,255,0,255,210	0/2:16,0,6:24:54,101,255,0,255,202	1/2:0,18,12:36:255,211,241,255,0,255
+chr21	39268443	chr21:39268443:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8:15:109,0,55	0/1:7,16:24:211,0,48	0/1:7,14:24:204,0,53
+chr21	39272009	chr21:39272009:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7,0:20:69,0,180,108,235,255	0/1:8,5,0:15:43,0,115,73,151,255	1/2:3,6,4:14:116,9,34,29,0,102
+chr21	39272310	chr21:39272310:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,12:18:140,0,44	0/1:12,10:22:91,0,121	1/1:0,13:14:194,29,0
+chr21	39274298	chr21:39274298:M	AGAGAGCGAGAGAGAGAGAGAGAGAGAGA	<13.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:26,2:28:0,45,255	0/0:30,3:33:0,44,255	0/1:20,13:34:138,0,255
+chr21	39279639	chr21:39279639:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAA	<27>,<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0,0:7:0,21,178,20,130,114	0/2:6,0,3:9:23,49,224,0,98,73	0/1:1,6,1:9:145,0,15,134,0,145
+chr21	39286017	chr21:39286017:M	TTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:12:0,33,255	0/0:13,0:19:0,53,255	1/1:0,5:6:140,15,0
+chr21	39290491	chr21:39290491:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:13:0,20,186	0/1:12,7:19:63,0,149	0/1:10,2:13:6,0,138
+chr21	39292114	chr21:39292114:M	GTGGGGGGTGGGTGGG	<1.5>	.	.	Motif=GTGG	GT:AD:DP:PL	0/1:2,1:3:17,0,44	0/1:1,3:4:67,0,15	1/1:0,1:1:28,3,0
+chr21	39294655	chr21:39294655:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,1:16:0,29,241	0/0:16,1:19:0,36,255	0/1:13,7:20:63,0,169
+chr21	39299248	chr21:39299248:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,17:37:167,0,213	0/1:16,16:32:157,0,155	1/1:4,39:44:255,49,0
+chr21	39299260	chr21:39299260:M	ATATATATATAT	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:21,7:31:0,12,55	0/0:22,10:32:0,9,50	1/1:0,25:30:129,49,0
+chr21	39299813	chr21:39299813:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,21:38:255,0,203	0/1:20,14:34:146,0,250	1/1:0,31:33:255,96,0
+chr21	39301894	chr21:39301894:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,3:35:0,47,255	0/0:27,0:30:0,84,255	0/1:25,17:42:182,0,255
+chr21	39302755	chr21:39302755:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:11:89,0,25	0/1:4,10:18:150,0,27	1/1:2,8:13:139,2,0
+chr21	39303520	chr21:39303520:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7:8:103,6,0	0/1:7,2:10:8,0,88	0/1:2,2:7:19,0,32
+chr21	39303823	chr21:39303823:M	AAAAAAAAAAAGAAAAAGAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:33,0:34:0,99,255	0/1:8,10:18:129,0,93
+chr21	39304142	chr21:39304142:M	AAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:18:255,0,50	0/1:2,11:15:254,0,21	1/1:0,17:21:255,56,0
+chr21	39304958	chr21:39304958:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:70,0,16	0/0:3,0:5:0,9,83	0/1:2,1:3:18,0,48
+chr21	39305861	chr21:39305861:M	AAAAAGAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,124	0/1:10,6:16:54,0,123	1/1:2,11:14:164,6,0
+chr21	39308482	chr21:39308482:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,5:9:62,74,177,0,70,45	0/2:3,1,2:7:25,12,89,0,39,39	1/2:0,10,3:14:255,44,11,178,0,143
+chr21	39309289	chr21:39309289:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,14:23:195,0,102	0/1:13,13:26:154,0,155	0/1:12,14:26:181,0,144
+chr21	39309825	chr21:39309825:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:58,0,58	0/1:1,2:4:34,0,5	0/1:6,3:13:25,0,97
+chr21	39310604	chr21:39310604:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,17:48:114,0,255	0/1:18,13:33:95,0,166	0/1:24,24:50:209,0,205
+chr21	39310614	chr21:39310614:M	ATTATTATTATT	<3.7>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:31,3:35:0,59,255	0/0:22,3:25:0,32,232	1/1:0,5:6:57,11,0
+chr21	39313590	chr21:39313590:M	CGCCGCCGCCGCCGCCGCCGCCGCC	<7.3>,<9.3>	.	.	Motif=CGC	GT:AD:DP:PL	0/2:10,0,12:22:163,223,255,0,161,125	0/2:7,0,11:18:144,193,255,0,106,73	1/2:0,8,6:14:217,106,120,144,0,184
+chr21	39315748	chr21:39315748:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:20:109,0,147	0/1:16,18:34:219,0,183	1/1:0,45:46:255,135,0
+chr21	39320668	chr21:39320668:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:11:49,0,75	0/1:5,2:8:20,0,62	0/1:2,5:8:74,0,12
+chr21	39321449	chr21:39321449:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,8:25:87,0,208	0/1:15,6:24:47,0,213	1/1:2,20:23:255,31,0
+chr21	39325277	chr21:39325277:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:10:131,11,0	0/1:2,7:9:91,0,7	1/1:3,20:26:255,23,0
+chr21	39327502	chr21:39327502:M	TTTTTTTTGTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:29:255,0,224	0/1:23,18:42:255,0,255	1/1:0,49:51:255,152,0
+chr21	39327906	chr21:39327906:M	AATAAATAAATAAATAAATGAATAAATAAATAAATAAATAAAATTAAATAAA	<12>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:7,1:8:0,4,115	0/0:8,0:8:0,24,145	1/1:0,18:18:255,53,0
+chr21	39328192	chr21:39328192:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,13:29:159,0,216	0/1:8,13:21:170,0,81	1/1:0,35:36:255,106,0
+chr21	39329517	chr21:39329517:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:12:71,0,70	0/1:9,6:17:71,0,102	1/1:1,12:14:199,23,0
+chr21	39329854	chr21:39329854:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:16:138,0,64	0/1:13,6:19:49,0,172	1/1:0,16:17:255,50,0
+chr21	39330931	chr21:39330931:M	AATAATAATAATAATA	<6.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:21,11:32:207,0,255	0/1:10,10:22:212,0,206	1/1:0,43:46:255,134,0
+chr21	39331427	chr21:39331427:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:11:23,0,69	0/1:6,3:10:20,0,66	1/1:0,5:5:78,14,0
+chr21	39333390	chr21:39333390:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:16:64,0,133	0/0:10,2:13:0,3,154	1/1:2,13:16:215,12,0
+chr21	39337021	chr21:39337021:M	TTTTTTCTTTTCTTTTCTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,15:41:145,0,255	0/1:11,10:23:111,0,129	1/1:1,19:21:255,44,0
+chr21	39344257	chr21:39344257:M	AAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:18:255,15,0	1/1:0,7:10:203,20,0	1/1:0,32:34:255,101,0
+chr21	39345110	chr21:39345110:M	CACACACACACACACACACACACACACAC	<12.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,15:30:255,0,255	0/1:14,7:21:127,0,255	1/1:0,29:31:255,92,0
+chr21	39356284	chr21:39356284:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:24:147,0,148	0/1:17,7:24:50,0,223	0/0:15,3:21:0,7,242
+chr21	39370422	chr21:39370422:M	ACACACACACACACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:8,7:17:120,0,144	0/1:17,6:25:71,0,255	0/1:21,12:37:181,0,255
+chr21	39371147	chr21:39371147:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:16:79,0,116	0/1:15,6:22:49,0,193	1/1:3,25:31:255,33,0
+chr21	39374892	chr21:39374892:M	TCCCCTCCCCTCCACTTCTGTCCCCTCCCCTGCCCTCCACTTCCCTTTCCCCTCCCC	<11.6>	.	.	Motif=TCCCC	GT:AD:DP:PL	0/0:9,1:10:0,12,33	0/0:8,1:10:0,8,25	0/1:5,4:10:2,0,6
+chr21	39376103	chr21:39376103:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:40,0,5	.	0/0:1,0:1:0,3,17
+chr21	39384565	chr21:39384565:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,24:28:255,24,0	1/1:1,16:18:255,35,0	1/1:0,22:23:255,67,0
+chr21	39386850	chr21:39386850:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,61,0	1/1:0,34:36:255,97,0	1/1:2,26:29:255,49,0
+chr21	39395369	chr21:39395369:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,110,0	1/1:0,34:35:255,103,0	1/1:0,32:35:255,102,0
+chr21	39396686	chr21:39396686:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:179,29,0	1/1:2,11:15:173,9,0	1/1:0,3:4:63,11,0
+chr21	39403616	chr21:39403616:M	TATTTTTATTTTTATTTTTTTTTT	<3.8>	.	.	Motif=TATTTT	GT:AD:DP:PL	1/1:0,23:23:255,69,0	1/1:0,24:25:255,73,0	1/1:0,26:26:255,78,0
+chr21	39404751	chr21:39404751:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:86,15,0	1/1:1,4:6:58,1,0	1/1:0,2:2:34,6,0
+chr21	39414707	chr21:39414707:M	TCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,15:20:245,54,0	0/1:7,8:19:84,0,49	1/1:0,18:21:255,57,0
+chr21	39414743	chr21:39414743:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<24>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,10,6:17:255,72,22,125,0,78	1/2:0,7,5:13:255,59,21,88,0,53	1/2:0,4,10:15:255,116,72,57,0,15
+chr21	39419524	chr21:39419524:M	AAAAAAAAAAAAGAAAAAAGAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,17:24:214,0,4	1/1:0,22:22:255,64,0	1/1:1,28:31:255,68,0
+chr21	39428579	chr21:39428579:M	TATATATATATATATATATAT	<8>,<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,2:6:70,20,38,48,0,39	1/2:0,3,5:8:119,50,98,70,0,51	0/0:0,0,0:3:0,0,0,0,0,0
+chr21	39433928	chr21:39433928:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:9:116,8,0	0/1:1,2:4:32,0,5	0/1:2,6:9:78,0,19
+chr21	39446168	chr21:39446168:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:36:255,106,0	1/1:0,42:45:255,134,0	1/1:0,33:35:255,104,0
+chr21	39447417	chr21:39447417:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:15:40,0,84	0/0:4,0:6:0,12,60	0/0:4,0:6:0,14,76
+chr21	39473885	chr21:39473885:M	AAAAAAAAAAACAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:28:255,81,0	1/1:0,22:23:255,68,0	1/1:2,30:33:255,44,0
+chr21	39474891	chr21:39474891:M	GTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:2,40:42:255,86,0	1/1:0,33:33:255,97,0	1/1:2,31:33:255,60,0
+chr21	39485682	chr21:39485682:M	TTTTCTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:11:188,32,0	0/1:3,7:11:95,0,19	1/1:0,13:13:227,38,0
+chr21	39490740	chr21:39490740:M	TTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:36:255,104,0	1/1:0,40:44:255,130,0	1/1:0,45:45:255,135,0
+chr21	39491159	chr21:39491159:M	TTTATTTATTTATTTATTTATTTTATTTTTTATTT	<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,26:42:117,4,0	0/1:0,17:32:64,0,18	1/1:0,30:44:161,23,0
+chr21	39492467	chr21:39492467:M	TATATATATATATATA	<4>,<7>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,3:5:73,34,64,47,0,38	1/2:0,3,9:12:146,99,203,69,0,44	1/2:0,6,3:9:168,33,54,141,0,131
+chr21	39492482	chr21:39492482:M	ACACACACACACACACACCACA	<10>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,28:30:255,83,0	1/1:1,27:32:255,76,0	1/1:0,37:38:255,105,0
+chr21	39494223	chr21:39494223:M	TCTTCTTCCTCTTCTTCTTCTTCTTCTTCTT	<8.3>,<9.3>	.	.	Motif=TCT	GT:AD:DP:PL	2/2:0,1,39:44:255,255,255,119,63,0	2/2:0,1,29:34:255,255,255,91,36,0	1/2:0,19,21:49:255,209,129,255,0,176
+chr21	39494252	chr21:39494252:M	TTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:42:255,114,0	1/1:0,28:32:255,84,0	1/1:0,35:41:255,105,0
+chr21	39496507	chr21:39496507:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:11:239,27,0	1/1:0,4:7:163,21,0	1/1:0,6:8:193,21,0
+chr21	39499247	chr21:39499247:M	CTATCTATCATCTGTCTATCTGTCTATCTATCTAT	<11.8>,<14.8>	.	.	Motif=CTAT	GT:AD:DP:PL	1/2:0,11,14:28:255,255,255,255,0,226	2/2:0,0,15:18:255,255,255,48,35,0	1/2:0,15,8:24:255,198,154,255,0,255
+chr21	39502986	chr21:39502986:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:30:255,78,0	1/1:0,29:29:255,85,0	1/1:1,29:31:255,64,0
+chr21	39509472	chr21:39509472:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:14:255,39,0	1/1:0,7:9:255,27,0	1/1:0,9:11:255,30,0
+chr21	39515693	chr21:39515693:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,51:51:255,150,0	1/1:1,56:57:255,150,0
+chr21	39532565	chr21:39532565:M	AAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:231,6,0	1/1:1,11:13:255,13,0	1/1:0,15:16:255,45,0
+chr21	39533114	chr21:39533114:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:27:106,0,218	0/1:11,10:23:111,0,138	1/1:1,24:25:255,55,0
+chr21	39533987	chr21:39533987:M	ATTTTTTATTTTTTATTTTATTTATTTTAATTTTATTTATTT	<11.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,5:16:42,0,99	0/1:5,3:8:19,0,47	1/1:0,8:9:115,23,0
+chr21	39537149	chr21:39537149:M	GAGAGAGAGAGAGAGAGAGA	<12>	.	.	Motif=GA	GT:AD:DP:PL	0/1:21,21:44:255,0,255	0/1:22,13:36:247,0,255	1/1:0,34:34:255,102,0
+chr21	39541684	chr21:39541684:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,16:28:223,0,147	0/1:19,22:41:255,0,222	1/1:0,50:50:255,148,0
+chr21	39541723	chr21:39541723:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:25:181,0,130	0/1:11,10:23:127,0,135	1/1:4,29:34:255,28,0
+chr21	39541891	chr21:39541891:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:25:181,0,255	0/1:11,2:15:15,0,255	1/1:1,18:19:255,29,0
+chr21	39549254	chr21:39549254:M	AAAAAAAAAAAATAATAAAACAAGAAAACAAACAAACAAAAAAA	<48>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,9:20:180,0,196	0/1:15,6:22:95,0,255	1/1:0,15:16:255,47,0
+chr21	39550241	chr21:39550241:M	TTTTTTTTTAATTTTATTTTA	<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:15,15:31:255,0,255	0/1:9,14:23:255,0,176	1/1:0,34:35:255,104,0
+chr21	39554938	chr21:39554938:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:3:81,9,0,67,9,60	1/1:0,1,0:1:28,3,0,22,3,20	1/2:0,1,5:6:142,95,82,20,0,3
+chr21	39554968	chr21:39554968:M	ATATATATATATATATATATATAAAATATATATATATATATAAAATATATATATATATATATTTTATATATATATATATATATA	<9>,<9.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,4,0,3:7:186,57,37,65,34,44,76,0,24,56	1/3:0,1,0,2:3:72,35,28,31,23,23,19,0,6,10	2/3:0,1,7,7:18:255,152,103,94,55,42,126,18,0,80
+chr21	39555174	chr21:39555174:M	TTTTTCTTTCTTTTTCTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,10:13:255,0,47	0/1:2,6:9:171,0,28	1/1:0,19:19:255,57,0
+chr21	39555355	chr21:39555355:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:26:255,0,231	0/1:5,12:18:255,0,83	1/1:0,32:35:255,99,0
+chr21	39561125	chr21:39561125:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,17:29:234,0,139	0/1:18,22:41:255,0,209	1/1:0,43:43:255,127,0
+chr21	39565197	chr21:39565197:M	TTTTTTTTTTTTTCTTTTTCTTTTT	<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,9,0:14:225,0,104,237,92,255	0/1:8,13,0:24:255,0,171,255,145,255	1/2:1,15,18:36:255,255,255,255,0,255
+chr21	39565386	chr21:39565386:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGT	<25.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:4,1,7:14:130,67,172,0,98,80	0/2:7,3,7:19:148,43,218,0,138,130	1/2:0,5,14:20:255,162,107,72,0,14
+chr21	39565610	chr21:39565610:M	TTTTTTTTTCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:17:26,0,170	0/1:12,2:16:12,0,161	1/1:1,5:8:84,3,0
+chr21	39568414	chr21:39568414:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:14:133,0,146	0/1:6,11:21:239,0,134	1/1:0,9:10:251,29,0
+chr21	39570292	chr21:39570292:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:39:255,0,255	0/1:22,25:50:255,0,255	1/1:0,38:40:255,119,0
+chr21	39571324	chr21:39571324:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,10,10:21:255,159,221,159,0,215	1/2:1,7,7:15:179,102,152,102,0,150	1/1:0,33,0:35:255,100,0,255,102,255
+chr21	39573635	chr21:39573635:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,10:19:255,174,121,133,0,103	0/1:10,10,0:21:107,0,119,140,176,255	0/2:5,2,13:22:255,192,239,0,72,104
+chr21	39575782	chr21:39575782:M	ACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:18,16:36:255,0,255	0/1:8,13:23:243,0,125	0/1:22,9:32:119,0,255
+chr21	39584122	chr21:39584122:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:12:74,0,185	0/1:5,4:9:81,0,109	1/1:0,13:13:255,39,0
+chr21	39589605	chr21:39589605:M	AAAAAAAATAAATAAATAAATAAAATAAAAAAAAAAAAAAACAAAAAA	<46>,<47>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,7:19:255,110,74,219,0,167	1/2:0,6,4:10:208,59,41,103,0,76	1/1:0,18,0:19:255,57,0,255,56,255
+chr21	39591584	chr21:39591584:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,16:33:205,0,214	0/1:17,16:34:195,0,203	0/0:35,1:37:0,82,255
+chr21	39624852	chr21:39624852:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,19:38:248,0,249	0/1:19,21:41:255,0,220	0/0:29,0:29:0,86,255
+chr21	39642874	chr21:39642874:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:17:255,32,0	0/1:1,7:9:93,0,2	0/0:6,0:7:0,20,116
+chr21	39643052	chr21:39643052:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:29:190,0,172	0/1:20,11:32:108,0,254	0/0:35,3:38:0,58,255
+chr21	39643418	chr21:39643418:M	AAAAAAAAAAAAAAAAGAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:66,0,92	0/1:12,8:22:87,0,139	0/0:18,0:19:0,53,255
+chr21	39657655	chr21:39657655:M	ATCTATCTGTCTGTCTATCTATCTATCTGTCTA	<7.2>	.	.	Motif=ATCT	GT:AD:DP:PL	1/1:0,32:32:255,95,0	0/1:16,11:27:118,0,208	1/1:0,37:37:255,109,0
+chr21	39670212	chr21:39670212:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,16:31:206,0,188	0/0:31,0:34:0,98,255	0/1:16,16:33:193,0,202
+chr21	39677481	chr21:39677481:M	TGTTTTTTGTTTGTTTGTTTGTTT	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:18,11:29:113,0,241	0/1:20,15:35:178,0,255
+chr21	39679809	chr21:39679809:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<25>	.	.	Motif=GA	GT:AD:DP:PL	0/1:1,0:2:9,0,20	1/1:0,1:1:28,3,0	1/1:0,6:13:244,34,0
+chr21	39682187	chr21:39682187:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:28:0,76,255	0/1:16,14:34:165,0,199	0/1:18,10:29:92,0,246
+chr21	39682705	chr21:39682705:M	AAACAAACAAACAAACAAACAAACAAACA	<6.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:13,20:33:255,0,139	0/1:19,15:34:182,0,255
+chr21	39689801	chr21:39689801:M	TATATATATATATATATATATATATATATATATATA	<16>,<19>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,11,4:16:255,45,79,253,0,255	2/2:0,0,2:2:29,35,57,6,6,0	0/1:3,4,1:9:83,0,68,85,29,124
+chr21	39691888	chr21:39691888:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:14:14,0,151	1/1:2,12:14:172,7,0	0/1:10,4:16:45,0,130
+chr21	39697558	chr21:39697558:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:23,0,7	0/1:4,3:8:23,0,48	0/0:5,1:6:0,2,63
+chr21	39700601	chr21:39700601:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:44:0,129,255	0/1:20,21:43:247,0,250	0/1:22,21:44:255,0,255
+chr21	39700938	chr21:39700938:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/1:13,6:22:41,0,179	0/0:17,3:20:0,6,245
+chr21	39701615	chr21:39701615:M	AAAAAAAAAAAGAAAGAAAAAAAAGAAAAGAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,3:31:0,35,255	0/1:11,13:24:159,0,124	0/1:13,10:23:114,0,169
+chr21	39705825	chr21:39705825:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,1:9:1,0,89	0/1:8,8:19:111,0,77	0/1:2,4:6:50,0,16
+chr21	39715037	chr21:39715037:M	CCTTTCCTTTCCTTTTCTTTCTTTC	<4>	.	.	Motif=CCTTT	GT:AD:DP:PL	0/0:30,0:30:0,86,255	0/1:23,20:43:177,0,216	0/1:17,22:42:229,0,140
+chr21	39715050	chr21:39715050:M	TTTCTTTCTTTCGTTCTTTCTTTCTTTTCTTTCTTTCTCATCTCCCTTCCCTTCTCTTCCTTTCTTTCTTTTCTTTTCTTTCTTT	<20>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:9,0:10:0,26,145	0/1:3,2:6:25,0,31	0/1:2,5:10:68,0,9
+chr21	39721674	chr21:39721674:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<10.5>,<12.5>	.	.	Motif=CCTT	GT:AD:DP:PL	0/2:8,0,4:12:40,74,255,0,148,115	0/1:8,11,0:19:255,0,181,255,140,255	1/2:0,10,6:16:255,108,126,255,0,242
+chr21	39724068	chr21:39724068:M	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	<9>,<10>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,7,2:9:240,37,10,126,0,101	1/2:0,13,9:22:255,168,105,243,0,181
+chr21	39734423	chr21:39734423:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,7:13:160,63,125,86,0,66	1/2:2,4,5:11:105,31,102,55,0,49	0/2:10,2,4:18:12,7,255,0,76,70
+chr21	39734440	chr21:39734440:M	ACACACACACACACACACACACACACACACACACAC	<17>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/0:19,3,0:22:0,25,185,66,249,255	0/1:13,5,0:19:8,0,98,48,137,255	0/2:6,0,11:21:255,255,255,0,69,96
+chr21	39736044	chr21:39736044:M	CTCACTCTCACT	<1.8>	.	.	Motif=CTCACT	GT:AD:DP:PL	0/0:35,0:36:0,105,255	0/1:13,19:32:255,0,242	0/0:39,0:39:0,117,255
+chr21	39745057	chr21:39745057:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,18:33:255,255,246,255,0,189	0/1:27,23,1:52:255,0,255,255,255,255	2/2:1,2,43:46:255,255,255,117,98,0
+chr21	39747941	chr21:39747941:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:36:0,87,255	0/1:21,14:36:138,0,255	0/0:19,0:21:0,61,255
+chr21	39749214	chr21:39749214:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:25:255,65,0	0/1:11,7:21:134,0,247	1/1:0,29:30:255,87,0
+chr21	39750511	chr21:39750511:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:129,15,0	0/1:14,1:21:14,0,255	1/1:0,7:10:211,24,0
+chr21	39753742	chr21:39753742:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:43:255,127,0	0/1:15,25:40:255,0,154	1/1:0,56:56:255,165,0
+chr21	39753921	chr21:39753921:M	TTTTTTTGTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	0/1:23,18:41:203,0,255	1/1:0,48:49:255,144,0
+chr21	39755587	chr21:39755587:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:16:62,0,136	0/1:11,11:22:126,0,127	0/1:20,4:27:2,0,255
+chr21	39756090	chr21:39756090:M	CAAACAAACAAACAAACAAACAAACAAACAAAC	<5.2>,<6.2>,<7.2>	.	.	Motif=CAAA	GT:AD:DP:PL	1/2:0,16,15,0:31:255,255,203,255,0,223,255,251,255,255	2/3:0,0,21,12:33:255,255,255,187,218,124,255,255,0,255	1/1:0,37,0,0:37:255,111,0,255,109,255,255,111,255,255
+chr21	39757580	chr21:39757580:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:18,0,124	0/0:15,3:18:0,2,202	0/1:12,4:18:27,0,166
+chr21	39760579	chr21:39760579:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:11,13:25:168,0,122	1/1:0,39:40:255,117,0
+chr21	39773473	chr21:39773473:M	CTTTTCTTTTTTTTTC	<5.6>	.	.	Motif=CTTTT	GT:AD:DP:PL	1/1:0,32:33:255,98,0	0/1:13,17:31:255,0,255	1/1:0,43:44:255,132,0
+chr21	39787553	chr21:39787553:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:10:118,13,0	0/1:2,5:7:57,0,11	1/1:0,12:12:189,35,0
+chr21	39797219	chr21:39797219:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	0/1:2,6:8:79,0,11	0/1:2,7:14:118,0,15
+chr21	39803224	chr21:39803224:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:26:0,40,255	0/1:9,12:23:150,0,99	0/0:39,1:41:0,102,255
+chr21	39806269	chr21:39806269:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20,0:22:255,29,0,255,64,255	1/2:0,9,10:19:255,168,115,128,0,98	1/1:0,14,0:14:246,41,0,246,41,246
+chr21	39807319	chr21:39807319:M	CACACACACACACACACACACACACACACACACACACGCACACACAC	<19.5>,<21.5>,<25.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,13,0,6,0:21:255,164,137,255,178,255,255,0,255,255,255,116,255,255,255	1/2:0,14,8,0,0:22:255,210,168,255,0,255,255,217,255,255,255,217,255,255,255	3/4:0,0,0,7,4:14:255,255,255,255,255,255,62,70,70,29,121,152,152,0,119
+chr21	39809977	chr21:39809977:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:62,11,0	0/1:1,1:2:11,0,11	0/1:4,6:10:72,0,38
+chr21	39816411	chr21:39816411:M	GAGAGACAGAGAGAGAGAGGAGAG	<14.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:13,12:27:203,0,228	0/1:10,7:19:110,0,176	1/1:1,26:28:255,49,0
+chr21	39816429	chr21:39816429:M	GGAGAGGAGGGGAGGGGAGGGAAGGG	<6.2>	.	.	Motif=GGAGG	GT:AD:DP:PL	0/1:13,17:30:224,0,150	0/1:14,7:21:60,0,181	1/1:0,28:29:255,83,0
+chr21	39820810	chr21:39820810:M	TTATTTTATTTTATTTTTTTT	<4>	.	.	Motif=TTATT	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,27:27:255,81,0	1/1:0,29:29:255,87,0
+chr21	39823963	chr21:39823963:M	TATTTATTTATTTATTTATTTATTTATTTATT	<12>,<13>	.	.	Motif=TATT	GT:AD:DP:PL	0/2:6,0,11:17:255,210,255,0,160,128	0/1:14,8,0:22:172,0,255,144,255,255	2/2:0,0,15:15:255,255,255,45,44,0
+chr21	39826429	chr21:39826429:M	TATATATATATTTATCATATATGTATGACATATATATATA	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/1:14,11:26:184,0,255	0/1:17,8:25:111,0,255	0/0:36,0:36:0,108,255
+chr21	39827940	chr21:39827940:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,28:53:255,0,255	0/1:16,15:32:171,0,198	0/0:28,1:31:0,72,255
+chr21	39830454	chr21:39830454:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,26:54:255,0,255	0/1:20,23:44:255,0,235	0/0:46,2:48:0,105,255
+chr21	39834719	chr21:39834719:M	AGAGGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGCGAGAGAG	<15.5>,<38.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,15,6:23:255,174,129,255,0,255	1/1:0,13,0:19:255,17,0,255,42,255	2/2:0,0,1:5:61,61,61,9,9,0
+chr21	39837403	chr21:39837403:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:31,26:57:255,0,255	0/1:21,14:35:255,0,255	0/0:48,0:48:0,144,255
+chr21	39844867	chr21:39844867:M	AAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,5:15:113,138,222,0,88,119	0/1:5,4,0:11:38,0,42,64,69,215	0/2:2,1,10:14:215,222,255,0,17,27
+chr21	39853719	chr21:39853719:M	TTTTTTTCTTTTCTTTTGTTTTTTTCTTCTTCTTTTTTTTTTTTTTTTT	<47>,<48>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,3:8:32,46,147,0,76,58	0/0:5,0,0:5:0,15,136,15,99,86	1/2:1,8,3:12:224,28,29,123,0,108
+chr21	39867169	chr21:39867169:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:26:135,0,178	0/1:12,8:24:94,0,152	1/1:1,30:32:255,76,0
+chr21	39874662	chr21:39874662:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:46:255,134,0	1/1:0,38:40:255,114,0	1/1:0,32:35:255,99,0
+chr21	39878003	chr21:39878003:M	GAGAGAGAGAGAGAGA	<9>	.	.	Motif=GA	GT:AD:DP:PL	0/1:16,17:33:224,0,208	0/1:22,24:46:255,0,255	0/0:42,0:42:0,124,255
+chr21	39878973	chr21:39878973:M	TTTTCTTTTCTTTCCTTTTTCTTTTTTTTTTTT	<6.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:26,0:29:0,83,255	0/1:6,10:16:155,0,73	0/0:27,1:29:0,63,255
+chr21	39884801	chr21:39884801:M	AGAGAGAGAGAGAGAGAGAGAGACAGAGA	<16.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:12,15:30:255,0,255	0/1:11,11:26:255,0,235	0/0:24,0:26:0,77,255
+chr21	39887339	chr21:39887339:M	TTTTTTTTTGTTTTTTGGTTTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,14,2:29:178,0,135,169,180,255	0/2:15,0,13:29:255,219,255,0,243,255	1/1:4,25,0:29:255,17,0,255,84,255
+chr21	39889412	chr21:39889412:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,4:9:240,69,43,86,0,61	1/2:0,2,2:5:92,24,22,24,0,21	1/2:0,5,3:8:215,51,28,85,0,62
+chr21	39890523	chr21:39890523:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,11:26:255,203,235,255,0,255	0/1:20,18,0:39:220,0,244,255,255,255	1/2:0,8,14:22:255,253,255,145,0,168
+chr21	39897386	chr21:39897386:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:12:0,17,171	0/1:5,5:10:55,0,55	0/0:9,0:11:0,32,176
+chr21	39903868	chr21:39903868:M	AAAAAAAACAAAAAAAAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,53,0	1/1:1,15:16:231,30,0	0/1:1,1:2:11,0,11
+chr21	39905254	chr21:39905254:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,23,0:50:255,0,255,255,255,255	1/2:0,22,17:40:255,255,255,255,0,255	0/0:44,0,0:44:0,130,255,130,255,255
+chr21	39907797	chr21:39907797:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,19:32:255,0,148	0/0:40,1:41:0,103,255	0/1:11,21:32:255,0,106
+chr21	39912313	chr21:39912313:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:33:123,0,255	0/0:26,3:33:0,43,255	0/1:23,12:35:112,0,255
+chr21	39914574	chr21:39914574:M	AAAAAAAAAAAAAAGAAAAAAAAAA	<28>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8,1:9:245,27,0,147,9,122	1/2:0,1,3:6:125,50,33,36,0,24	1/1:0,3,0:5:111,14,0,82,14,74
+chr21	39915230	chr21:39915230:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,232	0/1:22,10:32:83,0,255	0/1:26,14:42:143,0,255
+chr21	39932406	chr21:39932406:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,23,14:37:255,249,144,255,0,255	0/1:18,18,1:38:210,0,210,241,255,255	2/2:0,0,35:37:255,255,255,111,108,0
+chr21	39933640	chr21:39933640:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,14:16:207,13,0	1/1:1,8:9:115,10,0	1/1:0,20:21:255,61,0
+chr21	39942651	chr21:39942651:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:24:255,52,0	0/1:6,13:23:186,0,46	0/1:14,7:22:67,0,178
+chr21	39955558	chr21:39955558:M	TTTTTTTTTTGTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/0:25,0:25:0,75,255	0/1:10,18:29:255,0,189
+chr21	39956182	chr21:39956182:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1,0:40:0,99,255,117,255,255	0/1:16,15,0:32:173,0,202,224,255,255	0/2:23,2,22:49:255,255,255,0,255,255
+chr21	39962325	chr21:39962325:M	CTTTTCTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:2,6:14:49,0,96	0/1:4,4:8:36,0,91	0/1:1,8:9:93,0,3
+chr21	39965557	chr21:39965557:M	CACACACAAGCACACACATGCACACACACACACACACAC	<18.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:25,1,0:26:0,58,255,78,255,255	0/2:7,1,18:26:255,255,255,0,106,135	0/1:13,19,0:35:255,0,156,255,241,255
+chr21	39971360	chr21:39971360:M	AAAAATAAAAAT	<1.8>	.	.	Motif=AAAAAT	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,37:39:255,113,0	1/1:0,34:36:255,105,0
+chr21	39971606	chr21:39971606:M	TTCTTTTCTTTTTTTT	<3.4>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:24,23:47:255,0,255	0/0:50,0:50:0,150,255	0/1:21,19:40:255,0,255
+chr21	39973795	chr21:39973795:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<20.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	2/4:0,0,13,0,9:22:255,255,255,254,255,222,255,255,160,255,255,255,0,255,255	1/2:0,18,12,0,0:31:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255	3/4:2,0,0,6,12:20:255,255,255,255,255,255,174,211,211,153,54,127,126,0,72
+chr21	39977704	chr21:39977704:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:202,0,201	0/1:9,10:19:119,0,102	1/1:2,25:28:255,46,0
+chr21	39983863	chr21:39983863:M	TCCCTCCCTCCCTCCCTCCCTCCCT	<7.2>,<8.2>	.	.	Motif=TCCC	GT:AD:DP:PL	1/2:0,9,4:13:184,53,17,95,0,83	1/2:1,6,3:11:98,13,8,36,0,73	1/1:1,16,3:22:210,22,0,149,22,208
+chr21	39984743	chr21:39984743:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<16>,<18>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,5,10,0:16:255,255,255,74,0,112,255,255,143,255	1/3:0,5,0,11:21:255,255,255,255,255,255,96,0,124,102	2/2:0,0,14,0:15:255,255,255,45,42,0,255,255,45,255
+chr21	39985947	chr21:39985947:M	CACACTACACACACACACTCACATATAACACAAACACACACCAAACACACAC	<25>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,6:15:72,0,126	0/1:7,8:15:100,0,81	1/1:0,9:9:168,27,0
+chr21	39986238	chr21:39986238:M	CACACACACACACACACACACACACACACACACACAC	<15.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,10,0:16:255,0,130,155,151,255	0/2:7,1,7:19:185,117,255,0,160,134	1/1:0,20,0:21:255,63,0,255,61,255
+chr21	39993395	chr21:39993395:M	TTTTATTTTACTTTTTTTTTTTT	<4.4>,<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/2:8,0,14:22:220,255,255,0,140,98	1/2:0,20,18:41:255,255,255,255,0,255	0/1:15,16,0:31:234,0,214,255,255,255
+chr21	40003928	chr21:40003928:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:43,0,73	1/1:0,1:4:26,2,0	1/1:0,8:9:229,24,0
+chr21	40005205	chr21:40005205:M	AAAAAAAAAAAAAAAAAAAAAAACCAAAAAACAAAAAAAAAAAA	<45>,<46>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,1:3:50,16,8,28,0,25	1/2:0,3,4:7:133,64,45,41,0,29	0/1:1,2,0:3:25,0,8,28,16,51
+chr21	40012908	chr21:40012908:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,24:25:255,255,255,75,74,0	2/2:0,3,27:33:255,255,255,89,43,0	1/2:2,17,16:35:255,251,188,224,0,227
+chr21	40015418	chr21:40015418:M	TTTTTTTTTTTTTTCTTTTTT	<19>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,4:23:255,103,47,255,0,255	1/2:0,18,13:34:255,255,255,255,0,255	1/1:0,30,0:32:255,90,0,255,93,255
+chr21	40017565	chr21:40017565:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:30:255,85,0	1/1:0,21:21:255,62,0	0/1:12,23:38:255,0,126
+chr21	40020531	chr21:40020531:M	GAGAGAGAGAGAGAGAGGAGAGAGA	<14.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:8,10:19:190,0,144	0/1:9,6:17:96,0,176	0/0:17,0:17:0,51,255
+chr21	40022781	chr21:40022781:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:228,0,189	0/1:25,25:52:255,0,255	0/0:60,0:61:0,179,255
+chr21	40029427	chr21:40029427:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,14:33:172,0,215	0/0:29,0:31:0,90,255	1/1:3,18:22:255,11,0
+chr21	40039299	chr21:40039299:M	AAATAAAAATCAAAAAAAAAA	<3.3>	.	.	Motif=AAATAA	GT:AD:DP:PL	0/1:11,15:27:228,0,151	0/1:14,18:32:255,0,192	0/0:37,0:37:0,110,255
+chr21	40040928	chr21:40040928:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,0:45:0,129,255	0/1:17,15:33:255,0,255	0/0:39,0:42:0,120,255
+chr21	40050488	chr21:40050488:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,10:21:125,0,144	0/0:24,1:27:0,61,255	1/1:0,21:21:255,62,0
+chr21	40061570	chr21:40061570:M	AAAAAAAAAAAAAAAAGAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,8:17:102,0,87	0/0:19,0:23:0,66,255	1/1:0,13:13:227,38,0
+chr21	40064117	chr21:40064117:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,11:36:105,0,255	0/1:17,13:30:145,0,216	1/1:0,29:29:255,86,0
+chr21	40067726	chr21:40067726:M	TCCCTCCCTCCCCTCATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	<7.2>	.	.	Motif=TCCC	GT:AD:DP:PL	1/1:0,6:8:255,24,0	0/0:0,0:2:0,5,29	1/1:0,7:8:255,24,0
+chr21	40069086	chr21:40069086:M	AGAAAAAAAAAAAAAAGAAAAAGAAAAGAAAGAAAA	<7.4>	.	.	Motif=AGAAA	GT:AD:DP:PL	0/1:8,9:19:131,0,116	0/0:14,0:15:0,43,255	0/1:10,7:19:102,0,149
+chr21	40070396	chr21:40070396:M	AAAAGAAAAGAAAAGAAAAGAAAAAGAAAGAGAAAGAAAGACAAAGAGAAAGAAA	<8.3>	.	.	Motif=AAAAGA	GT:AD:DP:PL	0/1:3,7:19:113,0,22	0/0:22,0:35:0,41,255	1/1:0,17:24:255,52,0
+chr21	40082695	chr21:40082695:M	AAAAGAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,22,13:36:255,204,136,255,0,255	0/2:17,0,12:30:122,176,255,0,255,220	1/2:0,14,13:28:255,198,153,255,0,180
+chr21	40084502	chr21:40084502:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACA	<13.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:8,1,18:28:255,255,255,0,213,175	2/2:1,0,17:20:255,255,255,2,50,0	0/1:5,18,0:24:255,0,96,255,149,255
+chr21	40097532	chr21:40097532:M	TAAACATAAACATA	<22.5>	.	.	Motif=TAAACA	GT:AD:DP:PL	0/0:34,9:43:0,20,255	0/0:44,4:48:0,96,255	0/1:42,19:61:47,0,255
+chr21	40097955	chr21:40097955:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<11.8>,<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:6,8,3:17:181,0,126,171,121,255	0/2:9,0,3:14:1,28,255,0,228,219	1/2:0,10,13:23:255,123,93,249,0,214
+chr21	40098861	chr21:40098861:M	CACCTCACCTC	<27>	.	.	Motif=CACCT	GT:AD:DP:PL	0/0:48,9:57:0,62,255	0/0:36,4:40:0,72,255	0/1:40,18:58:44,0,255
+chr21	40100636	chr21:40100636:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,8:27:62,0,255	0/0:15,2:18:0,10,209	0/0:25,3:30:0,32,255
+chr21	40106894	chr21:40106894:M	TATTTTATTTTTTTT	<3.2>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:1,15:17:255,28,0	1/1:0,24:27:255,77,0	.
+chr21	40117949	chr21:40117949:M	ACACACACACACACACACACACATACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,12:25:153,0,173	1/1:0,36:39:255,113,0	0/0:39,2:41:0,84,255
+chr21	40133602	chr21:40133602:M	AAAAAAAACAAAAAACAAAAAAAAAGAAAAGAAAGAAGAAAAAA	<43>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,10:20:135,0,132	1/1:0,26:26:255,77,0	0/0:27,0:27:0,80,255
+chr21	40137179	chr21:40137179:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:11:93,0,39	0/0:15,3:18:0,2,204	1/1:1,15:21:255,43,0
+chr21	40137595	chr21:40137595:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,24:25:255,255,255,71,64,0	1/2:0,18,10:29:255,145,88,255,0,238	2/2:0,2,22:25:255,255,255,70,35,0
+chr21	40141976	chr21:40141976:M	ACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6:22:102,0,255	1/1:0,21:22:255,66,0	0/0:38,0:39:0,117,255
+chr21	40145977	chr21:40145977:M	TGTATGTATGTATACATGTACATATGTATGTAT	<9.2>	.	.	Motif=TGTA	GT:AD:DP:PL	0/1:17,18:35:150,0,134	1/1:0,22:26:255,62,0	0/1:12,14:31:118,0,89
+chr21	40152117	chr21:40152117:M	AAAAAAAAAAACACAAAAAAAACAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,93,255	0/0:35,0:36:0,105,255	0/1:12,12:26:254,0,255
+chr21	40156054	chr21:40156054:M	TATATATAATATAATTTATATTATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,18:23:255,0,68	0/0:15,0:15:0,45,255	0/1:9,21:30:255,0,156
+chr21	40163071	chr21:40163071:M	ACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/3:11,0,0,4:18:71,106,255,60,255,255,0,204,255,255	0/2:10,0,8,1:20:201,233,255,0,178,255,118,255,255,255	1/3:0,16,1,10:29:255,255,244,255,150,255,255,0,255,255
+chr21	40164802	chr21:40164802:M	AAAATAAATAAATAAAATAAAATGAAATAAAA	<7.2>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:15,21:36:255,0,255	0/0:28,0:28:0,84,255
+chr21	40166989	chr21:40166989:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,23:40:255,0,147	0/1:5,15:23:211,0,43	1/1:1,28:29:255,67,0
+chr21	40174532	chr21:40174532:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:27:255,71,0	0/1:16,16:36:255,0,255	0/1:23,11:37:211,0,255
+chr21	40175771	chr21:40175771:M	ACACACACATACACACACACACACACACACACACACACGCACACACACACACACGCACACACACA	<34.5>,<37.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,5:5:141,141,141,15,15,0	1/2:0,2,2:4:101,51,45,51,0,46	1/1:0,3,0:3:83,9,0,84,9,86
+chr21	40188786	chr21:40188786:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,11:26:255,194,244,255,0,255	1/1:1,25,0:32:255,73,0,255,90,255	0/2:16,1,4:21:9,52,255,0,217,233
+chr21	40200017	chr21:40200017:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:22:111,0,138	0/1:13,7:23:69,0,164	0/1:10,5:18:37,0,155
+chr21	40201378	chr21:40201378:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,24:46:255,0,255	0/1:23,32:55:255,0,251	0/1:18,20:39:255,0,230
+chr21	40206687	chr21:40206687:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:37:153,0,232	0/1:10,12:29:137,0,136	0/1:12,15:30:175,0,142
+chr21	40214736	chr21:40214736:M	AAAAAAAAAAAAAAAAACAAAACAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,1:17:0,22,211	0/0:17,1:19:0,39,255	0/1:13,33:47:255,0,87
+chr21	40215226	chr21:40215226:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:3:77,9,0	.
+chr21	40215941	chr21:40215941:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,16:39:180,0,255	0/1:12,15:28:180,0,136	0/1:22,20:43:234,0,255
+chr21	40216284	chr21:40216284:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18:40:255,0,255	0/1:15,17:33:255,0,253	0/0:44,0:45:0,134,255
+chr21	40231125	chr21:40231125:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:28:159,0,168	0/1:12,9:23:111,0,142	1/1:2,24:32:255,56,0
+chr21	40240350	chr21:40240350:M	TTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:7:0,21,194	0/1:2,12:18:255,0,35	0/0:0,0:2:0,1,2
+chr21	40242150	chr21:40242150:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,5:43:0,39,255	0/1:17,14:31:143,0,192	0/0:35,3:39:0,63,255
+chr21	40257470	chr21:40257470:M	ACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,5:18:96,0,255	0/0:15,0:17:0,25,255	1/1:0,3:7:106,12,0
+chr21	40261653	chr21:40261653:M	ACACACACACACACACACACACACACACACACACA	<16.5>,<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,10,16,0:27:255,248,255,149,0,210,255,255,255,255	2/3:1,1,7,7:19:255,255,255,161,159,149,92,159,0,169	0/1:16,18,0,0:35:196,0,163,255,217,255,255,255,255,255
+chr21	40266778	chr21:40266778:M	ATATATATATATATATATATATA	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,1,0:6:65,14,8,28,0,71	1/1:0,4,0:5:107,12,0,110,15,135	2/2:0,0,4:10:232,150,132,27,19,0
+chr21	40266800	chr21:40266800:M	ACACACACACACACCCCCACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,2:5:12,0,25	0/0:8,0:8:0,22,102	0/1:6,3:9:14,0,52
+chr21	40280182	chr21:40280182:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2,0:10:7,0,107,30,132,217	0/2:12,0,2:14:15,33,196,0,200,255	1/2:2,7,3:12:137,17,18,68,0,109
+chr21	40282591	chr21:40282591:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,28	.	1/1:0,5:8:169,21,0
+chr21	40292061	chr21:40292061:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,15:30:197,0,196	0/1:11,19:30:252,0,109	0/1:19,18:37:224,0,242
+chr21	40292186	chr21:40292186:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,1,3:12:21,34,156,0,85,99	1/2:1,1,1:3:11,2,20,3,0,22	1/2:0,6,2:10:129,42,37,108,0,146
+chr21	40292501	chr21:40292501:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,1:47:0,120,255	0/0:38,1:42:0,105,255	0/1:18,27:47:255,0,207
+chr21	40296832	chr21:40296832:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:0,0:1:0,3,10	0/1:1,3:5:82,0,14
+chr21	40318337	chr21:40318337:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:51:255,0,208	0/1:15,20:36:248,0,169	1/1:0,28:29:255,85,0
+chr21	40321617	chr21:40321617:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/0:24,1:26:0,56,255	0/1:11,6:20:58,0,158
+chr21	40322522	chr21:40322522:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,18:29:255,0,103	0/1:13,14:28:177,0,149	0/1:12,14:27:187,0,141
+chr21	40329613	chr21:40329613:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAATAAAAAATAAA	<15>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,6:6:108,18,0	1/1:0,16:16:255,47,0
+chr21	40330274	chr21:40330274:M	TATATTTATTATATTATATGCATATATTTATATATAATAAATTATATATTTATTATATTATAT	<3.8>	.	.	Motif=TATAT	GT:AD:DP:PL	0/1:6,8:15:255,0,106	0/1:1,2:3:68,0,17	0/1:5,3:9:106,0,101
+chr21	40334716	chr21:40334716:M	ACCACAACCACAACC	<1.5>	.	.	Motif=ACCACA	GT:AD:DP:PL	0/1:23,12:35:129,0,255	0/1:14,23:37:255,0,146	0/1:15,21:36:255,0,176
+chr21	40342611	chr21:40342611:M	TGTGTGTGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:25:0,67,255	0/1:7,4:11:14,0,45	0/0:14,0:14:0,37,152
+chr21	40342627	chr21:40342627:M	TATATATATATATATATATATAT	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,5:18:111,0,255	0/1:0,0:7:18,0,25	0/0:13,0:16:0,36,255
+chr21	40349137	chr21:40349137:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,84	1/1:0,3:3:81,9,0	0/0:11,0:16:0,37,255
+chr21	40354849	chr21:40354849:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:22:255,45,0	1/1:0,13:13:255,39,0	0/0:2,0:3:0,9,69
+chr21	40356389	chr21:40356389:M	ATATATATATATATATATAT	<13>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,9:34:212,0,255	0/1:11,6:20:152,0,255	0/0:37,0:40:0,119,255
+chr21	40357862	chr21:40357862:M	AAAAAAAAACAAAAACAAAAA	<3.7>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/1:19,19:38:255,0,255	1/1:0,32:32:255,96,0	0/0:39,0:39:0,117,255
+chr21	40363253	chr21:40363253:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,30,255	0/1:2,4:7:110,0,44	0/0:4,0:8:0,15,145
+chr21	40369386	chr21:40369386:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/0:14,0:19:0,44,255	1/1:0,12:15:206,35,0	0/1:8,12:25:181,0,74
+chr21	40370256	chr21:40370256:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:30:0,70,255	0/1:13,13:26:148,0,148	0/0:35,2:39:0,78,255
+chr21	40370628	chr21:40370628:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,2:30:0,51,255	0/1:12,14:26:172,0,136	0/0:41,0:42:0,123,255
+chr21	40371423	chr21:40371423:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,23:41:255,0,194	0/1:20,24:48:255,0,220	0/0:42,4:48:0,68,255
+chr21	40378555	chr21:40378555:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:0,0,0	1/1:0,4:6:124,13,0	.
+chr21	40396680	chr21:40396680:M	CTACTACTACTACTACTACTACCACCACTCCTACCACAACTACTACCACTAC	<18.3>	.	.	Motif=CTA	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:5,8:14:101,0,47	0/0:17,0:18:0,50,255
+chr21	40398627	chr21:40398627:M	TTTTTTCTTTCTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:11:51,0,51	0/1:8,3:12:12,0,100	0/0:16,0:19:0,50,255
+chr21	40399270	chr21:40399270:M	ACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7.6>	.	.	Motif=ACAAA	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:6,16:22:226,0,44	0/0:23,0:23:0,68,255
+chr21	40402666	chr21:40402666:M	TTTTTTATTTGTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:32:0,76,255	0/1:16,16:33:190,0,182	0/0:39,2:41:0,85,255
+chr21	40403630	chr21:40403630:M	CACACACACACACACACACACACACACACACACA	<16>,<18>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,13:26:255,233,255,226,0,255	1/2:4,10,10:25:227,113,238,122,0,252	2/2:1,0,17:18:255,255,255,35,51,0
+chr21	40410760	chr21:40410760:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,15:38:255,0,255	0/1:20,13:33:255,0,255	0/0:45,0:50:0,148,255
+chr21	40411176	chr21:40411176:M	ACACACACACACACACACACACACACACACACACACACACACACACAC	<19>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/0:16,0,0:16:0,48,255,47,255,255	0/1:10,5,0:18:120,0,244,149,162,255	0/2:11,0,9:20:93,151,255,0,185,127
+chr21	40419139	chr21:40419139:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,5:15:47,0,139	1/1:1,19:20:255,41,0	0/0:20,1:21:0,44,255
+chr21	40425670	chr21:40425670:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:15:14,0,133	0/1:8,3:12:24,0,94	0/1:7,1:9:2,0,89
+chr21	40428235	chr21:40428235:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<22>,<26>,<27>	.	.	Motif=TG	GT:AD:DP:PL	1/4:0,6,0,0,3:10:217,52,78,216,92,253,213,48,214,211,173,0,164,169,164	1/2:0,11,7,0,0:18:255,196,154,255,0,255,255,196,255,255,255,196,255,255,255	3/4:0,0,0,6,4:10:218,235,255,235,255,255,57,69,69,39,101,102,102,0,73
+chr21	40428834	chr21:40428834:M	ACACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:43,0:44:0,130,255	0/0:47,0:48:0,141,255	0/1:15,17:32:219,0,181
+chr21	40432206	chr21:40432206:M	AATAAAAAATAAATATATAAATAAATAAATAAATA	<11.8>,<12.8>,<13.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,9,13,1:29:255,251,182,178,0,112,255,178,171,255	0/1:7,3,0,0:13:74,0,229,40,230,255,83,238,255,255	2/3:0,0,11,4:15:255,255,255,63,62,19,170,147,0,126
+chr21	40433347	chr21:40433347:M	AAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:44,0,20	0/1:1,1:4:17,0,31	1/1:0,3:3:79,9,0
+chr21	40435547	chr21:40435547:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,21,15:38:255,236,165,255,0,255	1/1:2,23,1:26:255,41,0,255,58,255	1/2:0,15,14:31:255,255,189,226,0,179
+chr21	40452238	chr21:40452238:M	ACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	0/3:14,0,0,10:24:233,255,255,255,255,255,0,255,255,255	1/3:0,14,0,5:20:255,149,107,255,148,255,255,0,235,255	0/2:11,1,5,0:18:114,69,255,0,255,255,150,255,255,255
+chr21	40453041	chr21:40453041:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21>,<24>,<29>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,8,5:18:255,255,255,153,153,121,251,255,0,239	1/2:0,6,7,0:13:255,187,178,167,0,145,255,196,167,255	1/3:0,9,0,3:14:255,103,77,255,105,255,252,0,252,238
+chr21	40457530	chr21:40457530:M	AAACAAACAAACAAACAAACAAACAAAAAAAC	<9>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:15,16:31:198,0,180	0/1:19,22:41:255,0,206	0/0:49,0:49:0,144,255
+chr21	40481531	chr21:40481531:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:1,5:6:64,1,0	0/1:2,3:5:35,0,18
+chr21	40487274	chr21:40487274:M	TGTGTGTGTGCATGTGTGCGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTG	<26>	.	.	Motif=TG	GT:AD:DP:PL	0/0:11,0:16:0,5,69	1/1:5,8:23:92,7,0	0/1:6,7:16:49,0,15
+chr21	40487327	chr21:40487327:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:11,20:37:221,0,45	0/1:12,14:30:140,0,73	0/0:25,3:29:0,41,255
+chr21	40492678	chr21:40492678:M	AGAACAGAAAAAAAGAAAGAA	<6.2>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:24,7:31:48,0,255	1/1:0,23:24:255,68,0	0/1:30,11:41:91,0,255
+chr21	40493864	chr21:40493864:M	AAAAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,6,6:22:145,7,208,0,90,193	1/2:0,3,9:12:255,196,173,65,0,33	0/0:9,1,0:10:0,1,217,24,219,239
+chr21	40493880	chr21:40493880:M	ATATATACATATATATACATATATATATA	<15>,<15.5>,<16.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,1,7,7,0:21:160,89,90,26,54,51,10,4,0,108,134,106,88,151,255	1/3:0,3,0,7,0:11:175,132,111,110,93,90,17,0,16,30,119,96,99,58,160	2/4:0,0,7,0,5:17:255,203,175,126,117,89,158,109,62,132,150,73,0,102,195
+chr21	40494825	chr21:40494825:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,23:47:255,0,255	0/1:32,14:46:112,0,255	0/0:53,3:56:0,110,255
+chr21	40516122	chr21:40516122:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,21:36:255,0,183	0/1:16,23:39:255,0,175	0/0:48,0:48:0,142,255
+chr21	40516889	chr21:40516889:M	ATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:12,0,8:23:187,213,255,0,147,255	0/2:8,0,7:16:165,182,254,0,96,180	0/1:16,8,0:27:37,0,135,111,210,255
+chr21	40519851	chr21:40519851:M	TGTGTGTGTGTATGCGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,7:25:93,0,255	0/1:16,13:33:229,0,255	0/0:31,0:31:0,93,255
+chr21	40530880	chr21:40530880:M	TCCATCCATCCATCCATCCATCCATCCATCCATCCATTCAACCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACCATCCAT	<11.2>	.	.	Motif=TCCA	GT:AD:DP:PL	1/1:0,9:9:239,27,0	1/1:0,8:8:217,24,0	.
+chr21	40532869	chr21:40532869:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>,<16>,<19>,<20>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,16,1,6:24:255,255,255,119,184,136,255,255,90,255,255,255,0,255,255	2/3:0,0,14,11,0:26:255,255,255,255,255,255,255,255,0,255,255,255,197,255,255	1/4:0,7,0,1,13:22:255,239,255,255,255,255,255,211,255,255,197,0,186,179,156
+chr21	40548504	chr21:40548504:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:21:0,62,255	0/0:26,0:26:0,76,255	1/1:1,23:24:255,53,0
+chr21	40554197	chr21:40554197:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,1:19:0,38,255	0/1:18,8:28:55,0,248	0/1:20,5:28:28,0,255
+chr21	40558448	chr21:40558448:M	AAAAAGAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,18:39:223,0,255	0/0:27,1:28:0,65,255	0/1:22,12:34:118,0,255
+chr21	40559459	chr21:40559459:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,5:22:255,76,25,255,0,241	0/1:6,5,2:14:103,0,142,55,81,129	0/2:6,0,7:14:85,93,241,0,95,67
+chr21	40559787	chr21:40559787:M	TTTTTTTTTTTTTTTTTTTT	<14>,<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,3,4:9:169,178,216,71,110,96,107,105,0,93	1/3:0,4,0,5:12:227,106,143,236,156,255,137,0,132,116	0/2:5,1,2,1:9:44,29,170,0,117,139,44,98,69,114
+chr21	40563649	chr21:40563649:M	TATGTTTATGTTTGTTTATATATATGTTTAT	<4.8>	.	.	Motif=TATGTT	GT:AD:DP:PL	0/1:11,11:23:24,0,24	0/0:2,0:2:0,4,13	1/1:0,16:16:103,34,0
+chr21	40572073	chr21:40572073:M	TGTGTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGT	<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,7,14:23:255,141,115,101,0,41	0/2:6,2,9:17:86,64,180,0,49,28	0/2:6,2,9:17:88,65,181,0,50,28
+chr21	40574707	chr21:40574707:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,50,0	0/1:3,3:8:69,0,59	1/1:0,13:17:255,44,0
+chr21	40577242	chr21:40577242:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:29:255,85,0	0/1:16,10:28:101,0,204	1/1:0,25:27:255,78,0
+chr21	40580081	chr21:40580081:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:33:226,0,173	0/0:28,0:35:0,100,255	0/1:21,7:30:39,0,255
+chr21	40583907	chr21:40583907:M	AAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,7:28:255,178,147,255,0,255	0/2:16,0,11:30:255,255,255,0,255,255	0/1:21,14,0:37:156,0,255,250,255,255
+chr21	40585180	chr21:40585180:M	TTTTTTTTTTTTTTT	<14>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:17,1,5:27:112,147,255,0,255,255	0/2:10,0,9:23:213,247,255,0,187,255	0/1:17,16,0:35:204,0,198,255,255,255
+chr21	40585420	chr21:40585420:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,2,9	1/1:0,9:9:247,27,0	0/0:1,0:2:0,6,35
+chr21	40593321	chr21:40593321:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,17:31:227,0,162	0/1:18,22:42:255,0,205	0/1:15,22:37:255,0,165
+chr21	40595378	chr21:40595378:M	AAAAAAAAAGAAAAGAAAAGA	<5.2>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:12,16:29:224,0,151	0/1:17,27:44:255,0,178	0/1:16,14:30:173,0,211
+chr21	40596870	chr21:40596870:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,15:32:193,0,233	0/0:35,0:35:0,103,255	0/1:20,19:39:239,0,255
+chr21	40597501	chr21:40597501:M	TTTTTTTTTTTTTTTTTTTTTTT	<11>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:4:136,145,171,12,12,0	1/2:0,15,1:17:255,33,24,255,0,255	0/2:2,0,1:5:33,44,137,0,80,73
+chr21	40598498	chr21:40598498:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:43,0,17	0/0:1,0:1:0,3,16	0/0:3,0:3:0,9,50
+chr21	40603926	chr21:40603926:M	TTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,9:21:255,161,101,215,0,155	2/2:0,1,15:19:255,255,252,49,25,0	0/1:4,10,1:17:255,0,83,155,87,227
+chr21	40611058	chr21:40611058:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,88	0/0:3,0:3:0,9,50	0/1:7,4:11:36,0,88
+chr21	40615282	chr21:40615282:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,20,116	0/1:9,1:14:12,0,113	0/1:3,7:11:99,0,19
+chr21	40617017	chr21:40617017:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,18	1/1:0,3:4:41,1,0	0/0:7,1:8:0,6,106
+chr21	40618664	chr21:40618664:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:255,0,255	0/1:15,13:34:255,0,255	0/1:16,18:38:255,0,255
+chr21	40621923	chr21:40621923:M	GGAAGGAAAGGAAGGAAGAAAAAAGAAAGGAAGGAAGGAA	<6>,<10.2>	.	.	Motif=GGAA	GT:AD:DP:PL	1/2:0,3,12:15:69,40,255,45,0,29	1/2:1,6,15:22:122,46,255,94,0,75	0/2:10,1,7:19:0,29,255,0,39,10
+chr21	40622872	chr21:40622872:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,15:35:183,0,249	1/1:2,31:33:255,62,0	0/0:35,0:41:0,118,255
+chr21	40623239	chr21:40623239:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:1,29:30:255,70,0	0/1:15,20:35:255,0,176
+chr21	40628693	chr21:40628693:M	CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<8.5>,<10.5>,<11.5>,<12.5>	.	.	Motif=CTAT	GT:AD:DP:PL	1/2:0,9,14,0,0:23:255,255,255,255,0,214,255,255,255,255,255,255,255,255,255	1/3:0,11,0,23,0:35:255,255,255,255,255,255,255,0,255,255,255,255,255,255,255	2/4:0,0,7,0,18:26:255,255,255,255,255,255,255,255,255,255,211,197,0,140,153
+chr21	40629042	chr21:40629042:M	TGTGTGTGTATGTGTGTGTAGTATGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<33>,<34>,<37>,<38>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,9,0,0:18:255,160,108,160,0,108,255,160,160,255,255,160,160,255,255	1/3:0,4,0,3,0:8:193,81,72,148,83,140,114,0,67,105,164,50,118,114,156	2/4:0,0,7,0,6:13:255,225,255,104,169,148,255,225,104,255,198,121,0,198,180
+chr21	40636761	chr21:40636761:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,18:37:255,0,255	0/0:20,0:25:0,54,255	0/1:10,14:25:255,0,194
+chr21	40639076	chr21:40639076:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:27:108,0,210	0/0:26,0:30:0,84,255	0/1:14,6:20:49,0,195
+chr21	40639668	chr21:40639668:M	TGTGTATGTGTATGTGTGTGCATGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,6:15:69,0,126	0/0:24,0:24:0,71,255	0/1:18,9:29:90,0,255
+chr21	40640821	chr21:40640821:M	CACACTCACACCCCACACACACAAAAACACCACACGCACACACACAC	<24.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,14:24:198,0,121	0/0:19,0:19:0,56,255	0/1:12,6:18:59,0,171
+chr21	40642043	chr21:40642043:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:17,0,123	0/1:7,8:17:85,0,89	0/1:4,2:6:17,0,52
+chr21	40648251	chr21:40648251:M	ACACACACACACACACACACACACACACACACTCACACAC	<16>,<21>,<24>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,10,10:21:255,255,255,255,255,253,179,255,0,241	1/2:0,10,9,0:21:255,153,211,255,0,255,255,247,255,255	0/3:18,0,1,9:32:222,255,255,255,255,255,0,255,255,255
+chr21	40652348	chr21:40652348:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,20:32:255,0,17	1/1:0,40:49:255,121,0	0/0:14,2:29:0,1,255
+chr21	40654095	chr21:40654095:M	AAAAAGAAAAAGAAAAAAGAAAAA	<3.8>	.	.	Motif=AAAAAG	GT:AD:DP:PL	1/1:0,1:1:6,2,0	1/1:0,11:11:64,22,0	0/0:16,0:19:0,30,90
+chr21	40655447	chr21:40655447:M	TTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,13,0:21:174,0,84,233,144,255	0/2:15,0,7:27:155,193,255,0,255,255	1/2:0,9,7:18:255,205,178,157,0,212
+chr21	40656523	chr21:40656523:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:23:101,0,193	0/0:27,0:29:0,85,255	0/1:17,19:41:255,0,211
+chr21	40663258	chr21:40663258:M	GTGTGTGTGTG	<4.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,4:22:16,0,255	0/1:7,3:10:26,0,98	0/1:15,6:21:53,0,220
+chr21	40669591	chr21:40669591:M	TTTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,60,0	0/1:13,8:27:184,0,255	1/1:3,25:28:255,1,0
+chr21	40670537	chr21:40670537:M	AAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,1:18:0,18,255	0/1:16,6:24:112,0,255	0/1:14,3:18:23,0,255
+chr21	40671693	chr21:40671693:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:5:0,0,82	0/0:8,0:11:0,33,255	0/1:3,3:7:82,0,71
+chr21	40674610	chr21:40674610:M	TTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTT	<5.3>	.	.	Motif=TTTTCT	GT:AD:DP:PL	1/1:0,2:3:38,6,0	0/0:1,0:3:0,3,18	1/1:0,4:6:75,12,0
+chr21	40675015	chr21:40675015:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,13:27:174,0,173	0/1:15,13:29:153,0,190	0/1:12,18:33:248,0,143
+chr21	40681490	chr21:40681490:M	TTTTTTTTTTTTTTT	<12>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,25,3,8:38:255,255,189,255,93,255,255,0,255,255	0/3:11,0,2,9:26:255,255,255,124,255,255,0,255,255,255	1/2:0,16,9,0:26:255,255,232,255,0,255,255,169,255,255
+chr21	40684063	chr21:40684063:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:8,7:15:80,0,98	1/1:1,19:22:255,46,0
+chr21	40698870	chr21:40698870:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,83	0/0:3,0:3:0,9,84	0/1:2,10:12:233,0,19
+chr21	40706181	chr21:40706181:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:22:0,53,255	0/0:9,1:10:0,14,116	0/1:6,5:12:42,0,56
+chr21	40708101	chr21:40708101:M	GGGGTAGGGGAAGGGCAAGTGGGAA	<4>	.	.	Motif=GGGGAA	GT:AD:DP:PL	0/0:34,0:34:0,99,255	0/0:29,2:32:0,51,255	0/1:18,17:35:186,0,203
+chr21	40712805	chr21:40712805:M	GAGACAGAGAGAGAGAGAGAGAGAGAGAGA	<17>	.	.	Motif=GA	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/0:37,0:38:0,114,255	0/1:12,14:28:255,0,249
+chr21	40716381	chr21:40716381:M	TGTGTGTGTGTGTGTGTGTG	<9>,<11>	.	.	Motif=TG	GT:AD:DP:PL	0/2:21,0,10:31:102,190,255,0,255,255	0/2:13,1,16:30:202,255,255,0,180,159	0/1:23,21,0:44:255,0,255,255,255,255
+chr21	40720675	chr21:40720675:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/0:36,0:36:0,106,255	0/1:22,21:43:255,0,255
+chr21	40726550	chr21:40726550:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0,0:40:0,118,255,120,255,255	0/1:15,21,1:37:255,0,161,255,248,255	0/2:21,2,22:46:255,255,255,0,255,255
+chr21	40731729	chr21:40731729:M	CCCCCCCCCCCGCCCCCC	<19>	.	.	Motif=C	GT:AD:DP:PL	0/1:3,3:6:35,0,35	0/0:12,0:12:0,35,203	1/1:1,24:25:255,56,0
+chr21	40739782	chr21:40739782:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:29:145,0,209	0/1:17,15:35:173,0,206	0/1:12,19:33:254,0,128
+chr21	40746376	chr21:40746376:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,12:34:237,0,255	0/1:22,21:44:255,0,255	0/1:20,23:45:255,0,255
+chr21	40755453	chr21:40755453:M	TAAAAAATAAATAAAAAATAAA	<6.5>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:9,15:24:218,0,103	0/1:21,14:35:151,0,255	0/1:12,12:24:154,0,154
+chr21	40756977	chr21:40756977:M	GTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,16:30:206,0,159	0/1:15,18:33:216,0,164	0/1:13,12:25:142,0,160
+chr21	40759959	chr21:40759959:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9.5>,<10.5>,<11.5>	.	.	Motif=ATTT	GT:AD:DP:PL	3/3:0,0,0,20:20:255,255,255,255,255,255,60,60,59,0	1/3:0,8,0,3:11:255,81,57,198,54,168,218,0,144,205	2/3:0,0,9,5:14:255,255,255,94,93,53,169,145,0,129
+chr21	40765100	chr21:40765100:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,18:32:247,0,152	0/1:18,19:40:231,0,219	0/1:19,19:38:237,0,235
+chr21	40766670	chr21:40766670:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:10:16,0,74	0/0:4,1:7:0,6,67	0/1:4,4:9:47,0,32
+chr21	40766693	chr21:40766693:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:42,0,204	0/1:6,1:8:6,0,137	0/1:12,3:16:33,0,255
+chr21	40767881	chr21:40767881:M	TCTCTCTTTCTCTCTCTC	<12>	.	.	Motif=TC	GT:AD:DP:PL	0/1:21,11:34:217,0,255	0/1:22,20:45:255,0,255	0/1:19,16:35:255,0,255
+chr21	40780399	chr21:40780399:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<6>,<7>,<12>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,17,2,0:19:255,57,0,255,27,202,255,57,255,255	1/3:0,9,3,5:20:255,55,97,146,95,191,255,0,91,255	1/2:0,7,4,1:12:255,41,22,81,0,62,255,28,68,255
+chr21	40780424	chr21:40780424:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:17,2:20:0,28,184	0/1:9,2:12:1,0,75	0/1:7,4:13:18,0,55
+chr21	40781013	chr21:40781013:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,18:32:250,0,175	0/1:12,19:32:250,0,132	0/1:20,18:38:224,0,255
+chr21	40781993	chr21:40781993:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:0,0:1:12,3,0	1/1:0,3:3:83,9,0
+chr21	40789268	chr21:40789268:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:30:0,69,255	0/1:18,23:44:255,0,199	0/0:42,1:44:0,111,255
+chr21	40789554	chr21:40789554:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,8:19:95,116,255,0,126,106	0/1:6,6,1:18:171,0,145,165,90,250	0/2:8,0,8:18:100,139,255,0,143,97
+chr21	40790167	chr21:40790167:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,9:11:238,0,21	0/1:3,8:13:198,0,57	0/1:4,14:19:255,0,62
+chr21	40791157	chr21:40791157:M	AAAAAAAAAAAAAGAAAAGAAAAA	<23>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,1,6:17:63,93,255,0,140,146	1/2:0,9,14:24:255,242,255,156,0,190	0/2:14,0,12:26:143,215,255,0,215,179
+chr21	40792124	chr21:40792124:M	TCTTCTTCTTCTTCTT	<6.7>	.	.	Motif=TCT	GT:AD:DP:PL	0/0:9,0:11:0,32,190	1/1:0,3:3:53,9,0	0/0:13,0:13:0,38,234
+chr21	40792138	chr21:40792138:M	TTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:5:0,7,28	0/1:2,9:13:220,0,23	0/0:3,0:3:0,9,86
+chr21	40794543	chr21:40794543:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:18:73,0,144	0/1:6,18:25:235,0,32	0/1:18,18:39:214,0,214
+chr21	40794889	chr21:40794889:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/1:17,12:29:124,0,212	0/0:40,0:41:0,120,255
+chr21	40795355	chr21:40795355:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,81,255	0/1:13,23:37:255,0,134	0/0:35,0:35:0,103,255
+chr21	40800716	chr21:40800716:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:11:37,0,88	0/0:6,1:8:0,7,97	0/0:14,2:20:0,13,223
+chr21	40800963	chr21:40800963:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:11,14:26:169,0,128	0/0:34,0:36:0,105,255
+chr21	40805699	chr21:40805699:M	TTTTCTTTCTTTTCTTTTCTTTTTTTT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:15,16:31:255,0,238	0/1:8,10:18:170,0,123	0/1:21,22:43:255,0,255
+chr21	40807110	chr21:40807110:M	AATCAATCAATCAATCAATCAATCAATCAATCAAT	<7.8>	.	.	Motif=AATC	GT:AD:DP:PL	1/1:0,36:37:255,107,0	1/1:0,30:30:255,88,0	1/1:0,32:32:255,95,0
+chr21	40808475	chr21:40808475:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13:16:236,28,0	1/1:2,16:20:219,3,0	0/1:6,23:31:255,0,15
+chr21	40817087	chr21:40817087:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,19:44:226,0,255	0/1:14,16:33:190,0,173	0/1:14,17:34:241,0,156
+chr21	40818548	chr21:40818548:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:1,0:1:0,3,27	1/1:0,15:16:255,48,0
+chr21	40821112	chr21:40821112:M	ATATATATAGATATATATATCTTCACATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,12:12:255,36,0	0/1:0,22:28:255,0,88
+chr21	40821372	chr21:40821372:M	CACACACACAGACACACGCGCGCACACACACACACACACACACACAC	<24.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,14:14:238,41,0	0/1:7,9:17:111,0,76
+chr21	40822319	chr21:40822319:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:27,3,0	1/1:0,3:3:79,9,0	.
+chr21	40823204	chr21:40823204:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,13,2:37:255,0,255,211,255,255	0/1:19,14,0:35:255,0,255,255,255,255	1/2:0,16,21:37:255,255,255,255,0,190
+chr21	40824404	chr21:40824404:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:97,0,97	0/1:8,12:21:153,0,76	0/1:5,9:15:124,0,45
+chr21	40825267	chr21:40825267:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<11.5>,<13.5>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:0,12,8:25:255,148,217,209,0,255	1/1:0,21,0:23:255,67,0,255,69,255	2/2:0,0,10:11:168,198,255,29,33,0
+chr21	40827469	chr21:40827469:M	AAAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,0:9:0,21,159	0/0:1,0:4:0,1,19	1/1:0,9:20:217,20,0
+chr21	40827484	chr21:40827484:M	AAAGAAAAGAAAGAAAGAAA	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:20,0:22:0,60,255	0/0:19,0:23:0,59,255	0/1:8,18:32:255,0,153
+chr21	40831308	chr21:40831308:M	CACACACACACAGGCACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,16:31:217,0,198	1/1:0,34:34:255,100,0	0/1:17,25:43:255,0,196
+chr21	40834410	chr21:40834410:M	AATAATAATAATAATAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	<15>,<21>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:8,10,0:18:247,0,184,255,151,255	0/1:5,4,0:10:94,0,122,101,81,174	1/2:0,5,4:9:199,74,94,136,0,124
+chr21	40843369	chr21:40843369:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,9:16:204,0,127	0/1:17,14:34:255,0,255	0/1:10,25:37:255,0,172
+chr21	40843791	chr21:40843791:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,12:22:160,0,80	0/1:14,7:24:79,0,166	0/1:11,8:21:89,0,132
+chr21	40851703	chr21:40851703:M	AAAAAAAGAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,2:45:0,95,255	0/1:14,18:33:230,0,150	0/0:39,2:41:0,84,255
+chr21	40853041	chr21:40853041:M	CACACACACACACACACACACACACACACACACACA	<23>,<25>,<26>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,5,0,2:8:207,54,36,183,35,174,153,0,148,146	2/3:0,0,5,6:11:255,255,255,100,100,68,84,83,0,52	1/2:0,4,5,0:10:255,140,122,110,0,89,209,88,109,194
+chr21	40853692	chr21:40853692:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,77,255	0/1:21,13:36:140,0,255	0/0:28,2:30:0,53,255
+chr21	40855201	chr21:40855201:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/1:5,5:13:79,0,50	0/1:8,3:11:22,0,111
+chr21	40856358	chr21:40856358:M	GAGAGAGAGAGAGAGAGAGA	<8>	.	.	Motif=GA	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:23,0:25:0,70,255	0/1:12,22:36:255,0,194
+chr21	40857178	chr21:40857178:M	ACACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:34:0,100,255	0/1:16,17:33:202,0,184	0/1:19,11:31:109,0,255
+chr21	40867099	chr21:40867099:M	AGAGAGAGAGAGAGAGA	<10.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,14:33:218,0,255	0/0:5,0:5:0,15,110	0/1:8,14:23:243,0,112
+chr21	40875086	chr21:40875086:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,3,0:18:21,0,180,68,194,255	0/2:6,1,4:13:50,59,184,0,60,78	0/1:11,5,0:20:65,0,137,111,160,255
+chr21	40883733	chr21:40883733:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:27:0,79,255	0/1:13,16:30:211,0,141	0/1:13,11:25:136,0,161
+chr21	40884083	chr21:40884083:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:15,6:22:43,0,212	0/1:10,8:18:95,0,131
+chr21	40889997	chr21:40889997:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,23:34:255,0,178	0/1:17,32:52:255,0,255	1/1:0,38:41:255,122,0
+chr21	40901110	chr21:40901110:M	CCCCCGCCCCCTCCCCCCCCCCC	<22>	.	.	Motif=C	GT:AD:DP:PL	0/1:7,19:28:255,0,51	0/1:2,7:10:92,0,7	1/1:0,19:19:255,56,0
+chr21	40905882	chr21:40905882:M	AAAAAAAAGAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,63,255	0/0:29,2:31:0,56,255	0/1:21,14:36:157,0,255
+chr21	40909827	chr21:40909827:M	ATATATATATATATATATATACTTTTATATATAT	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,7:25:170,0,255	0/0:5,0:5:0,15,134	1/1:0,13:13:255,39,0
+chr21	40912957	chr21:40912957:M	TTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5,0:7:177,21,0,129,20,115	1/2:0,3,2:5:144,35,20,52,0,37	1/2:0,6,3:11:249,42,23,104,0,90
+chr21	40913377	chr21:40913377:M	ACACACACACACACACACACACACACACACACACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,28:28:255,84,0	1/1:0,11:21:255,36,0	1/1:0,35:38:255,113,0
+chr21	40913800	chr21:40913800:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,33:38:255,37,0	0/1:17,19:36:229,0,194	1/1:3,55:59:255,119,0
+chr21	40922518	chr21:40922518:M	CACACACACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	.	1/1:0,12:13:223,38,0	.
+chr21	40922802	chr21:40922802:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<7>,<10>,<12>	.	.	Motif=TATC	GT:AD:DP:PL	0/3:19,0,0,9:28:91,172,255,171,255,255,0,255,255,255	1/3:0,17,0,7:24:255,125,144,255,192,255,255,0,255,255	0/2:13,0,10,0:23:120,186,255,0,242,176,185,255,206,255
+chr21	40922965	chr21:40922965:M	AAAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,31:34:255,255,255,101,93,0	1/2:0,19,15:36:255,255,255,255,0,255	2/2:0,1,40:46:255,255,255,131,98,0
+chr21	40923354	chr21:40923354:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:1,30:31:255,73,0	1/1:1,43:44:255,111,0
+chr21	40924546	chr21:40924546:M	AAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17,1:21:255,54,0,255,42,255	1/2:0,10,6:17:255,102,55,172,0,137	1/1:0,24,2:27:255,78,0,255,43,255
+chr21	40925384	chr21:40925384:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,40:41:255,102,0	1/1:0,39:39:255,115,0	1/1:0,49:49:255,145,0
+chr21	40926278	chr21:40926278:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,20:22:255,46,0	1/1:0,31:35:255,99,0	1/1:0,36:36:255,106,0
+chr21	40927731	chr21:40927731:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,60,1:61:255,180,0,255,161,255	1/2:0,18,32:50:255,255,255,255,0,177	1/1:0,53,0:53:255,159,0,255,156,255
+chr21	40935019	chr21:40935019:M	TTTTTCTTTTCTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	<44>,<45>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,4:7:128,58,49,51,0,31	1/2:0,1,3:4:65,41,38,16,0,5	1/2:0,2,2:4:77,28,22,34,0,22
+chr21	40950142	chr21:40950142:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,21:44:255,0,255	0/1:25,27:52:255,0,255	1/1:0,40:40:255,118,0
+chr21	40953242	chr21:40953242:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:42:0,105,255	0/1:18,21:41:255,0,209	0/0:42,3:46:0,80,255
+chr21	40964233	chr21:40964233:M	ATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:26,28:58:255,0,255	0/1:24,22:46:238,0,255	1/1:0,46:51:255,148,0
+chr21	40966924	chr21:40966924:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:21:102,0,139	0/1:9,10:19:116,0,99	1/1:1,24:28:255,63,0
+chr21	40973828	chr21:40973828:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,255	0/1:17,19:38:255,0,255	1/1:0,42:46:255,134,0
+chr21	40986198	chr21:40986198:M	AAAAGGAAAAGAAAAGAAAAGAA	<5.4>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:24,22:46:255,0,255	0/1:20,16:36:255,0,255	1/1:0,33:33:255,99,0
+chr21	40989717	chr21:40989717:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,16:41:255,0,255	0/1:19,11:33:220,0,255	1/1:0,30:31:255,90,0
+chr21	40999709	chr21:40999709:M	TTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,2,17:35:255,255,255,0,255,255	0/2:25,1,10:40:195,160,255,0,255,255	1/2:0,7,21:28:255,255,255,124,0,42
+chr21	41000138	chr21:41000138:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.8>,<9.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/2:9,0,14,0:23:255,255,255,0,250,205,255,255,172,255	0/1:3,10,0,0:13:255,0,54,255,83,255,255,54,255,255	2/3:0,0,9,12:21:255,255,255,193,226,166,169,170,0,109
+chr21	41006219	chr21:41006219:M	GTGTGTGTGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,16:33:205,0,224	0/1:13,19:32:245,0,138	0/0:32,0:33:0,97,255
+chr21	41012829	chr21:41012829:M	CACACTCACACACGCACTCACACACATACCCAACACAAACTCACACACA	<23.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,7:22:70,0,198	0/0:22,0:22:0,65,255	0/1:16,13:29:155,0,204
+chr21	41015243	chr21:41015243:M	AAATAAATAAATAAATAAATAA	<8.5>,<8.8>,<9.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,12,0,4:17:255,84,37,255,84,255,232,0,214,186	3/3:0,0,0,8:8:245,169,147,245,169,245,24,24,24,0	1/2:0,17,11,0:28:255,239,162,255,0,255,255,239,255,255
+chr21	41019616	chr21:41019616:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:22:172,0,98	1/1:1,20:26:255,45,0	0/0:25,0:25:0,73,255
+chr21	41023102	chr21:41023102:M	ATATATATATATATATATATATATATATATATATATATA	<12.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:1,0,10:18:255,209,255,0,77,39	2/2:0,0,0:1:8,10,11,2,3,0	1/2:0,11,4:22:255,106,48,255,0,215
+chr21	41023140	chr21:41023140:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15.5>,<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:1,0,3,5:10:73,99,234,33,47,20,12,36,0,8	.	1/2:0,5,3,2:10:151,37,101,126,0,114,127,8,111,122
+chr21	41035097	chr21:41035097:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAAGAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:0,23:23:255,67,0	0/1:13,3:18:1,0,196
+chr21	41041811	chr21:41041811:M	AGAAAGAGAAAGAGAAAGAAAGAGAGAGACAGAAAGAAAGAAAGAAAAAAGAAAGA	<1.5>	.	.	Motif=AGAAAG	GT:AD:DP:PL	1/1:0,6:7:169,21,0	.	0/1:8,5:14:83,0,142
+chr21	41044192	chr21:41044192:M	TCTCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:1,45:46:255,117,0	0/1:11,22:34:255,0,117
+chr21	41049550	chr21:41049550:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,22,18:41:255,255,227,255,0,255	2/2:0,3,32:37:255,255,255,102,55,0	0/1:7,20,0:27:255,0,49,255,126,255
+chr21	41051733	chr21:41051733:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:34:223,0,197	0/0:27,0:27:0,79,255	0/1:21,14:39:148,0,255
+chr21	41055109	chr21:41055109:M	AAAAAAAAAAAAAAAAA	<15>,<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,19,12,0:32:255,170,139,255,0,255,255,220,255,255	2/3:1,0,6,7:15:181,204,255,116,202,177,88,106,0,135	0/1:13,22,1,0:38:255,0,255,255,215,255,255,234,255,255
+chr21	41055830	chr21:41055830:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<22>,<23>,<26>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,6,5:11:217,220,223,133,136,118,103,103,0,150	1/3:0,5,0,1:6:152,27,13,109,28,96,129,0,82,130	2/3:0,0,5,6:11:227,231,236,161,165,151,84,84,0,118
+chr21	41062611	chr21:41062611:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,12:25:155,224,255,0,210,174	0/0:29,2,4:35:0,66,255,31,255,255	1/2:0,18,18:36:255,255,255,255,0,255
+chr21	41062905	chr21:41062905:M	AAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:13:106,0,139	0/0:11,0:15:0,36,255	1/1:0,18:23:255,68,0
+chr21	41070490	chr21:41070490:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,11:36:194,0,255	0/0:32,0:37:0,96,255	0/1:15,15:32:255,0,255
+chr21	41070734	chr21:41070734:M	TCTCTCTCTCTC	<5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:25,20:45:255,0,255	0/1:16,15:31:182,0,200	0/1:23,17:40:202,0,255
+chr21	41073040	chr21:41073040:M	TCTATCTATCTAGCTATATATCTAT	<5.2>	.	.	Motif=TCTA	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:49,0:49:0,144,255	0/1:15,15:30:200,0,192
+chr21	41085124	chr21:41085124:M	TTGTTGTTGTTGTTGTGTTGTTGTTGTTTTTGTTGTTGTTGCTGTT	<14.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:14,15:30:182,0,162	0/0:24,0:26:0,70,255	0/1:10,11:21:129,0,112
+chr21	41085947	chr21:41085947:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,11:20:144,0,107	0/0:20,0:21:0,61,255	0/1:6,13:22:181,0,57
+chr21	41091408	chr21:41091408:M	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAGGAA	<13>,<17>	.	.	Motif=GAAG	GT:AD:DP:PL	1/2:0,20,3:23:255,56,23,255,0,255	2/2:0,0,1:2:17,20,30,3,3,0	1/2:0,8,4:12:255,73,87,221,0,209
+chr21	41093559	chr21:41093559:M	CACATACACACACACA	<6>	.	.	Motif=CA	GT:AD:DP:PL	0/0:38,0:40:0,116,255	0/0:38,0:38:0,114,255	0/1:18,7:25:104,0,255
+chr21	41093587	chr21:41093587:M	ACACACACACACACACACACACACACACA	<19.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6,0:22:177,0,255,222,255,255	0/0:26,0,0:26:0,78,255,78,255,255	1/2:0,5,4:10:255,117,102,177,0,165
+chr21	41093868	chr21:41093868:M	TTTTTTTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,6:12:68,98,255,0,60,27	0/0:10,0,0:13:0,31,255,30,172,143	1/2:0,13,3:24:255,42,71,255,0,255
+chr21	41099351	chr21:41099351:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5,0:7:154,0,10,166,27,209	0/0:3,0,0:4:0,12,115,9,96,93	1/2:1,3,10:16:255,255,255,65,0,68
+chr21	41103102	chr21:41103102:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0,0:7:0,21,198,21,144,125	0/2:3,0,3:6:34,43,119,0,50,34	0/1:7,3,0:10:53,0,169,51,120,145
+chr21	41103488	chr21:41103488:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<26>,<27>	.	.	Motif=GT	GT:AD:DP:PL	0/3:11,0,0,2:13:21,54,255,34,255,255,0,255,255,255	2/3:0,0,5,5:10:255,255,255,83,83,54,83,83,0,54	0/1:9,5,0,0:14:110,0,235,133,251,255,137,251,255,255
+chr21	41107199	chr21:41107199:M	AAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3,0:14:57,0,221,78,233,255	0/0:18,0,0:23:0,63,255,63,255,255	1/2:0,3,4:9:196,106,90,78,0,61
+chr21	41108362	chr21:41108362:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:18,0,23:41:255,255,255,0,255,221	0/0:27,0,2:30:0,84,255,52,255,255	1/2:0,17,10:27:255,156,105,255,0,235
+chr21	41108524	chr21:41108524:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:22:0,46,255	0/0:21,0:24:0,69,255	0/1:7,8:16:97,0,81
+chr21	41112478	chr21:41112478:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:33:0,93,255	0/0:24,0:28:0,83,255	0/1:16,9:26:162,0,255
+chr21	41115488	chr21:41115488:M	TTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:155,18,0	.	1/1:0,4:6:123,15,0
+chr21	41116336	chr21:41116336:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,14:26:196,0,132	0/0:34,0:34:0,100,255	1/1:0,32:32:255,94,0
+chr21	41125939	chr21:41125939:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:24,17:42:189,0,255	0/0:46,2:48:0,105,255
+chr21	41126166	chr21:41126166:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,6:30:73,0,255	0/0:18,0:23:0,62,255	1/1:1,14:17:255,18,0
+chr21	41129065	chr21:41129065:M	AACAAAACAAAACAACAAAAAAAAAACACACACACAAAAAAACAAAACAACAACAACAACAA	<22.3>,<22.7>,<23.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/3:0,14,0,6:21:255,151,105,255,109,231,255,0,172,255	1/2:0,7,12,0:19:255,152,97,91,0,35,255,141,90,255	3/3:0,0,0,3:3:87,84,81,64,64,56,9,9,9,0
+chr21	41131440	chr21:41131440:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:14,18:32:255,0,175	0/1:24,20:44:238,0,255	1/1:0,37:37:255,109,0
+chr21	41140799	chr21:41140799:M	TGTGTTGTGTTGCTGTT	<2.6>	.	.	Motif=TGTGT	GT:AD:DP:PL	0/1:8,23:32:255,0,131	0/0:30,0:30:0,90,255	1/1:0,28:35:255,84,0
+chr21	41140817	chr21:41140817:M	GTGGTGGTGGTGGTGGTGGTG	<5.3>	.	.	Motif=GTG	GT:AD:DP:PL	0/1:13,25:38:255,0,246	0/0:30,0:30:0,90,255	1/1:0,41:41:255,123,0
+chr21	41145711	chr21:41145711:M	TTTTTTCTTTTCTTTTTTTTCTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,11:17:156,0,62	0/1:11,8:19:85,0,137	1/1:0,28:30:255,88,0
+chr21	41150797	chr21:41150797:M	TGTGTGTGTGGTGTGTGATGTATGTGTCTGGGTGTGTGATGTGAGGTGTGTAGTGTGGTGTG	<32>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,6:13:73,0,91	0/0:23,0:23:0,67,255	0/1:9,3:12:19,0,127
+chr21	41150916	chr21:41150916:M	TGTGTGTGTGTGTG	<6>	.	.	Motif=TG	GT:AD:DP:PL	0/1:23,7:30:50,0,255	0/0:44,0:44:0,130,255	0/1:16,14:30:181,0,213
+chr21	41154937	chr21:41154937:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,0,9:16:117,162,255,0,108,81	0/2:10,1,3:15:11,26,190,0,119,144	1/2:3,5,8:19:154,94,176,58,0,118
+chr21	41160431	chr21:41160431:M	ATATATATAGAAATATATATTACATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:9:217,21,0	1/1:0,0:1:1,0,0	1/1:0,2:4:86,11,0
+chr21	41168979	chr21:41168979:M	CCCTCCCTCCC	<2.5>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:6,3:9:6,0,34	0/0:3,0:4:0,1,19	0/0:4,0:4:0,10,38
+chr21	41168987	chr21:41168987:M	CCCCCCCGCCCCCCCCCCACCCC	<22>	.	.	Motif=C	GT:AD:DP:PL	1/1:1,8:10:127,8,0	.	1/1:0,1:1:18,3,0
+chr21	41169450	chr21:41169450:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/1:10,11:24:129,0,124	0/1:10,23:34:255,0,81
+chr21	41170216	chr21:41170216:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,32:47:255,0,122	0/1:21,21:44:250,0,251	1/1:0,45:45:255,132,0
+chr21	41189195	chr21:41189195:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,22:41:255,0,201	0/1:18,23:41:255,0,193	0/1:15,14:29:166,0,184
+chr21	41196316	chr21:41196316:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,30:32:255,76,0	1/1:1,34:35:255,86,0	1/1:1,37:40:255,100,0
+chr21	41197267	chr21:41197267:M	TTTTTTTTGTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:20:244,20,0	1/1:1,23:29:255,25,0	1/1:1,24:28:255,44,0
+chr21	41197656	chr21:41197656:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,20:29:255,0,81	0/1:26,34:62:255,0,255	0/1:28,19:47:205,0,255
+chr21	41198850	chr21:41198850:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<11.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:15,5:20:77,0,255	0/1:5,3:8:58,0,114	0/1:11,9:20:186,0,246
+chr21	41200191	chr21:41200191:M	AAAAAAAAAAACAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:195,0,196	0/1:11,7:20:81,0,131	0/1:21,18:40:207,0,254
+chr21	41218870	chr21:41218870:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:25:177,0,255	0/1:23,7:32:87,0,255	0/1:18,9:28:162,0,255
+chr21	41221045	chr21:41221045:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:13:104,0,52	0/1:14,6:24:43,0,214	0/1:11,15:30:203,0,135
+chr21	41221828	chr21:41221828:M	AAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:194,14,0	0/1:2,7:10:193,0,31	0/1:0,3:8:81,0,18
+chr21	41223354	chr21:41223354:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:29:116,0,234	0/1:17,14:32:159,0,201	0/1:16,13:30:153,0,199
+chr21	41225234	chr21:41225234:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,13:25:173,0,127	1/1:1,25:26:255,59,0	0/1:10,13:25:178,0,106
+chr21	41232869	chr21:41232869:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,5:19:44,0,152	0/1:7,5:12:50,0,85	0/1:8,9:17:109,0,91
+chr21	41242340	chr21:41242340:M	TCTCTCTCTCTCTCTCTC	<10>	.	.	Motif=TC	GT:AD:DP:PL	0/1:22,17:39:202,0,255	0/1:18,20:39:239,0,213	0/1:18,21:40:255,0,219
+chr21	41253442	chr21:41253442:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:60,0,60	0/0:18,0:19:0,55,255	0/1:5,7:13:87,0,52
+chr21	41259442	chr21:41259442:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,26:43:255,0,194	0/0:43,2:45:0,96,255	0/1:26,21:49:245,0,255
+chr21	41265174	chr21:41265174:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,16,0:37:189,0,255,255,255,255	1/2:3,19,10:32:255,127,196,255,0,255	0/1:9,14,0:24:196,0,93,255,138,255
+chr21	41266942	chr21:41266942:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<18>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,15:28:255,255,194,236,0,157	1/2:0,14,12:27:255,207,130,248,0,173	1/2:0,17,10:27:255,178,100,255,0,226
+chr21	41279025	chr21:41279025:M	TTGTTTTGTTTTTTTTG	<3.6>	.	.	Motif=TTGTT	GT:AD:DP:PL	0/1:21,30:51:255,0,255	0/1:22,15:37:255,0,255	0/1:27,31:58:255,0,255
+chr21	41286120	chr21:41286120:M	ATAGATAGATAGATAGATAGATAGATAGATAAATAAATGATAGATAGATA	<10.5>,<11.5>,<13.5>,<14.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/4:0,3,0,0,9:12:255,253,246,255,255,255,255,175,233,234,83,0,58,84,57	2/4:0,0,11,0,8:19:255,255,255,222,226,194,255,255,146,255,200,200,0,255,255	1/3:0,11,0,11,0:22:255,207,255,255,255,255,255,0,207,255,255,207,255,255,255
+chr21	41291172	chr21:41291172:M	CACACACACACACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,15:34:191,0,238	0/0:43,0:43:0,127,255	0/1:26,27:53:255,0,255
+chr21	41308519	chr21:41308519:M	TTTTTGTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:82,0,18	0/1:1,0:3:3,0,36	0/1:4,4:9:108,0,91
+chr21	41311252	chr21:41311252:M	ATATATATATATATATATATATATATATATATATATATATATATATGTATATATA	<29.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,3:4:52,0,10	.	0/0:0,0:1:0,0,0
+chr21	41312710	chr21:41312710:M	TGTGTGTGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,1,10,7:18:255,255,255,190,172,158,191,164,0,255	1/2:0,15,10,0:25:255,146,101,255,0,188,255,174,255,255	0/3:6,0,0,4:11:97,115,255,115,222,205,0,162,107,151
+chr21	41313801	chr21:41313801:M	TTGTTGTTGTTGTTGTTGTT	<7.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:18,17:35:232,0,245	0/1:22,15:37:168,0,255	0/1:20,18:39:229,0,255
+chr21	41314763	chr21:41314763:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,27:41:255,0,131	0/1:17,20:40:232,0,189	0/1:14,20:34:252,0,147
+chr21	41330135	chr21:41330135:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:18:208,0,1	0/1:11,13:30:158,0,133	1/1:0,15:17:255,49,0
+chr21	41333132	chr21:41333132:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:32:0,94,255	0/1:17,19:38:226,0,200	0/0:40,6:47:0,29,255
+chr21	41346023	chr21:41346023:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:43:255,0,255	0/0:42,0:43:0,126,255	0/1:6,30:47:255,0,30
+chr21	41352797	chr21:41352797:M	AAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,20,14:34:255,255,172,255,0,255	0/1:16,6,0:22:102,0,255,107,255,255	2/2:0,0,18:18:255,255,255,54,53,0
+chr21	41355557	chr21:41355557:M	AAACAAACAAACAAACAAACAAACA	<5.2>,<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,0,36:36:255,255,255,107,108,0	1/2:0,13,16:29:255,255,255,230,0,255	0/2:26,0,24:50:255,255,255,0,255,255
+chr21	41356041	chr21:41356041:M	ACACACACACACACACACACACACACACACACACACACACACACA	<19.5>,<21.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	3/4:0,0,0,11,9:20:255,255,255,255,255,255,153,154,154,95,157,188,187,0,130	1/4:0,14,0,0,9:25:255,255,232,255,255,255,255,158,255,255,255,0,255,255,255	2/3:1,0,4,4,0:11:104,119,239,52,113,94,64,111,0,109,120,193,69,128,199
+chr21	41362741	chr21:41362741:M	TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:121,21,0	1/1:0,6:6:99,17,0	0/1:2,3:5:36,0,19
+chr21	41365204	chr21:41365204:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,30:30:255,88,0	0/1:22,16:38:189,0,255
+chr21	41373806	chr21:41373806:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:6:0,17,96	0/1:10,3:14:13,0,129	0/1:11,4:15:25,0,145
+chr21	41384839	chr21:41384839:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,4:19:29,0,182	0/1:16,14:32:146,0,200	0/0:23,3:27:0,26,255
+chr21	41386996	chr21:41386996:M	AACAACAACAACAACAA	<4.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:27,20:47:255,0,255	0/1:16,18:34:232,0,191	0/0:41,1:42:0,105,255
+chr21	41389198	chr21:41389198:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,12:29:146,0,204	0/1:13,12:26:135,0,162	0/0:38,2:43:0,87,255
+chr21	41391006	chr21:41391006:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,16,13:30:255,216,255,255,0,255	0/2:12,3,12:27:130,155,255,0,123,161	0/1:7,16,0:23:219,0,57,255,105,255
+chr21	41391779	chr21:41391779:M	TTTTCTTTTTCTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,22:34:255,0,194	0/1:9,28:37:255,0,137	0/0:36,0:39:0,116,255
+chr21	41400704	chr21:41400704:M	TTTATTTATTTATTTATTT	<3.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,50:50:255,147,0	1/1:0,39:39:255,115,0
+chr21	41401686	chr21:41401686:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:3,30:35:255,49,0	1/1:1,40:41:255,103,0
+chr21	41409237	chr21:41409237:M	ACACACACACACACACACACACATACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:1,40:45:255,113,0	1/1:1,31:33:255,79,0
+chr21	41419783	chr21:41419783:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:6:69,1,0	1/1:0,8:9:141,26,0	1/1:1,7:9:108,9,0
+chr21	41420282	chr21:41420282:M	GGGCGGGGGCGCGGGCGCGGGCGCGGGC	<3.7>,<5.7>	.	.	Motif=GGGCGC	GT:AD:DP:PL	0/1:6,13,0:20:255,0,112,255,113,255	1/2:0,14,10:24:255,177,210,255,0,255	0/2:8,0,4:12:40,74,255,0,147,115
+chr21	41424227	chr21:41424227:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,2,12:25:169,150,255,0,163,129	1/2:0,9,10:20:255,146,116,165,0,111	0/0:29,0,3:32:0,87,255,40,255,255
+chr21	41429905	chr21:41429905:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:13:30,0,204	1/1:0,5:7:139,9,0	0/1:9,11:21:255,0,197
+chr21	41430452	chr21:41430452:M	TGGGAATGGGACTGGG	<2>	.	.	Motif=TGGGAA	GT:AD:DP:PL	0/1:12,4:16:50,0,250	0/0:29,1:30:0,65,255	0/0:35,2:37:0,63,255
+chr21	41431482	chr21:41431482:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,15:42:169,0,255	1/1:2,33:35:255,67,0	0/1:15,19:35:246,0,182
+chr21	41437475	chr21:41437475:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:22:182,0,105	0/0:48,1:49:0,126,255	0/1:13,19:32:255,0,146
+chr21	41442007	chr21:41442007:M	GTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGCGCGTGTGTGTGTG	<26.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,9:20:179,0,217	0/0:18,0:19:0,57,255	0/1:15,3:18:29,0,255
+chr21	41448931	chr21:41448931:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,22,4:26:255,102,37,255,0,255	1/1:0,31,0:31:255,93,0,255,93,255	1/2:0,14,5:20:255,137,97,255,0,255
+chr21	41451835	chr21:41451835:M	AAAAAAAAAAAAAAAAACAAACAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:5:0,11,98	0/1:1,4:7:96,0,11	0/0:9,1:13:0,8,246
+chr21	41462272	chr21:41462272:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:26:255,63,0	1/1:0,15:20:255,53,0	1/1:0,20:21:255,60,0
+chr21	41473915	chr21:41473915:M	GTGAGTGAGGGAGTGAGTGAGGAGTGAGGAGGTGAGGGGGTGAGTG	<12.5>	.	.	Motif=GTGA	GT:AD:DP:PL	0/1:4,6:10:73,0,37	1/1:0,5:5:81,15,0	0/1:5,4:9:41,0,55
+chr21	41483767	chr21:41483767:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,7,8:16:255,126,100,90,0,91	0/2:2,1,10:14:251,164,163,0,19,17	1/2:2,14,9:25:255,122,88,175,0,199
+chr21	41485082	chr21:41485082:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,10,0,3:14:255,45,54,228,83,238,255,0,183,255	1/1:0,30,0,0:31:255,90,0,255,88,255,255,90,255,255	2/3:0,1,10,6:17:255,255,255,108,158,143,255,161,0,255
+chr21	41485653	chr21:41485653:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,13:31:148,0,242	0/0:32,5:37:0,21,255	0/1:13,14:27:173,0,155
+chr21	41495068	chr21:41495068:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,16:34:255,249,195,255,0,224	2/2:1,3,23:27:255,255,255,61,27,0	1/2:0,11,14:25:255,212,179,196,0,125
+chr21	41495627	chr21:41495627:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,8:20:255,127,175,170,0,236	1/2:4,7,5:16:101,26,103,60,0,156	1/1:2,16,0:18:248,17,0,255,48,255
+chr21	41495916	chr21:41495916:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:41:218,0,255	0/0:45,2:50:0,109,255	0/1:16,18:38:222,0,189
+chr21	41501609	chr21:41501609:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,8:10:212,0,0	1/1:0,2:3:70,9,0	1/1:0,13:15:255,42,0
+chr21	41513419	chr21:41513419:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,10:18:246,165,233,112,0,153	0/2:12,1,4:17:20,52,255,0,158,172	0/1:12,15,0:28:199,0,135,255,183,255
+chr21	41517991	chr21:41517991:M	TATATATATATATACATACATATATATATATATATA	<20>,<23>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,9,9:19:255,228,199,199,0,186	0/1:9,5,0:15:77,0,172,114,204,255	1/2:0,7,5:15:255,111,89,154,0,189
+chr21	41518026	chr21:41518026:M	ACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,3:18:30,0,255	0/1:9,4:13:68,0,206	1/1:0,2:2:54,6,0
+chr21	41518038	chr21:41518038:M	ATATATATATATATAATAT	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:23,7:31:4,0,223	0/0:25,0:26:0,72,255	0/1:14,15:31:106,0,119
+chr21	41518474	chr21:41518474:M	ACACACACACACACACACACACACACACACAAACACGCACACACCACA	<21.5>,<25>,<27.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,1:6:103,117,165,27,27,12,89,137,0,134	2/2:1,0,23,0:24:255,255,255,53,72,0,255,255,72,255	1/3:0,7,0,3:11:255,81,58,255,81,255,207,0,208,199
+chr21	41519884	chr21:41519884:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,29,18:48:255,255,255,255,0,255	0/2:16,0,7:23:57,123,255,0,239,218	1/1:2,39,0:44:255,92,0,255,125,255
+chr21	41522527	chr21:41522527:M	TTTTTTTTTTAATTTTCATTTTTATTTT	<4.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/1:16,8:24:107,0,255	0/1:19,19:38:255,0,255	0/0:34,0:34:0,102,255
+chr21	41525941	chr21:41525941:M	AAAAAAAAAAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:30:245,0,111	1/1:0,20:20:255,59,0	0/0:14,0:16:0,44,255
+chr21	41528708	chr21:41528708:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0,3:27:0,71,255,23,255,255	0/2:14,1,12:30:138,160,255,0,244,185	0/1:13,13,1:29:255,0,255,230,216,255
+chr21	41530831	chr21:41530831:M	TGTGTGTGTGTATGCGTGTGCGTGTGTGTGTGTGTATGTGTGTGTGT	<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,11:23:147,0,140	0/1:7,7:14:83,0,83	0/0:22,0:23:0,67,255
+chr21	41531638	chr21:41531638:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,23:32:255,0,126	0/1:16,17:35:255,0,255	1/1:0,43:43:255,129,0
+chr21	41533411	chr21:41533411:M	TAATAATAATAAT	<4>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:18,3:21:0,21,188	0/0:25,2:27:0,50,255	1/1:0,4:6:50,11,0
+chr21	41542198	chr21:41542198:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:117,12,0	0/0:2,0:3:0,9,72	0/1:1,4:7:122,0,10
+chr21	41544227	chr21:41544227:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:18:0,47,255	0/1:9,4:16:68,0,220	0/0:11,0:14:0,36,255
+chr21	41545476	chr21:41545476:M	AGCAAGCAAGCAAGCAAGCAAGCAAG	<8.5>	.	.	Motif=AGCA	GT:AD:DP:PL	0/0:14,0:16:0,42,255	0/0:21,0:21:0,63,255	1/1:0,12:13:255,36,0
+chr21	41545520	chr21:41545520:M	GGAAGGAAGAAAGGGAGGCAGGGAGGAAGGGAAAGGAGGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAGAAGGAAGAAAGGA	<16>	.	.	Motif=GGAA	GT:AD:DP:PL	0/0:1,0:1:0,3,25	0/1:2,4:7:85,0,39	0/1:3,4:7:80,0,53
+chr21	41545610	chr21:41545610:M	GAGGGAGGGAGGGA	<3.8>	.	.	Motif=GAGG	GT:AD:DP:PL	0/1:19,13:32:124,0,223	0/1:13,11:24:114,0,146	1/1:0,22:22:255,64,0
+chr21	41547561	chr21:41547561:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,51,0	1/1:0,21:28:255,69,0	1/1:0,18:21:255,45,0
+chr21	41552908	chr21:41552908:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:24,20:46:255,0,255	0/0:46,0:47:0,138,255
+chr21	41553411	chr21:41553411:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32,0:32:255,96,0,255,95,255	1/2:0,14,11:25:255,169,127,252,0,182	1/1:0,40,0:40:255,120,0,255,118,255
+chr21	41553576	chr21:41553576:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,29:30:255,255,255,88,90,0	1/2:4,9,18:32:255,255,255,98,0,190	2/2:1,0,32:34:255,255,255,82,99,0
+chr21	41554154	chr21:41554154:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTT	<24>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27,0:30:255,89,0,255,89,255	1/2:0,14,16:35:255,255,255,255,0,255	1/1:0,22,0:26:255,77,0,255,77,255
+chr21	41559027	chr21:41559027:M	TAAATAAATAAATAAGTAAATAAATAAATAAATA	<9.5>,<10.5>	.	.	Motif=TAAA	GT:AD:DP:PL	2/2:0,0,23:23:255,255,255,69,68,0	2/2:0,0,18:18:255,255,255,54,53,0	1/2:0,15,11:26:255,206,131,241,0,208
+chr21	41561616	chr21:41561616:M	CTCTCTCTCTCTCTCTCTC	<11.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:1,14:16:255,21,0	1/1:1,20:25:255,42,0	1/1:2,17:22:255,11,0
+chr21	41561634	chr21:41561634:M	CACACACACACACACAGACACACACACACACACACACACACACACACACACACAC	<25.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,5,9:15:198,88,70,70,0,30	0/2:6,1,9:16:76,74,191,0,60,29	0/2:8,4,8:20:86,30,179,0,49,43
+chr21	41562069	chr21:41562069:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:46,1:48:0,123,255	0/0:47,1:49:0,126,255	0/1:14,25:40:255,0,150
+chr21	41564352	chr21:41564352:M	AAAATAAAATAACATAAAATAAAA	<5>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,38:38:255,114,0	1/1:0,30:32:255,91,0	0/1:18,15:33:255,0,255
+chr21	41565091	chr21:41565091:M	TTTTTTTTTGTTTGTTTTTCGTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1:39:0,97,255	0/0:34,0:36:0,105,255	0/1:17,12:29:137,0,228
+chr21	41565853	chr21:41565853:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,38:38:255,112,0	0/1:13,16:29:215,0,159
+chr21	41566112	chr21:41566112:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:28:255,72,0	1/1:0,18:25:255,73,0	0/1:15,6:24:114,0,255
+chr21	41566289	chr21:41566289:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:1,33:36:255,77,0	0/1:20,17:43:255,0,255
+chr21	41570145	chr21:41570145:M	AAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,12,104	0/0:3,0:4:0,12,101	1/1:0,6:6:181,18,0
+chr21	41572988	chr21:41572988:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:1,40:44:255,106,0	0/1:11,21:32:255,0,108
+chr21	41573374	chr21:41573374:M	AAAAAAAAGAAAGAAAGAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:40,0:40:0,118,255	0/1:14,17:31:220,0,166
+chr21	41585357	chr21:41585357:M	ACACAGCACACACACCACACATGCACACCCCACATACACACATACCATACACACACCACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,6:20:240,0,255	0/1:15,2:17:50,0,255	0/1:26,8:34:255,0,255
+chr21	41586087	chr21:41586087:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:10:0,30,255	0/0:8,0:10:0,15,210	1/1:1,7:13:207,4,0
+chr21	41590933	chr21:41590933:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11:27:129,0,182	0/1:8,14:25:202,0,68	0/0:32,1:35:0,84,255
+chr21	41591630	chr21:41591630:M	CCTGTCCCTGTC	<2.2>	.	.	Motif=CCTGTC	GT:AD:DP:PL	0/1:17,8:25:29,0,141	0/0:21,2:23:0,39,235	0/0:13,1:14:0,26,149
+chr21	41591642	chr21:41591642:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,18:22:255,11,0	1/1:1,12:15:196,24,0	1/1:2,11:13:157,3,0
+chr21	41607856	chr21:41607856:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,6:9:84,108,204,0,47,29	1/2:2,3,2:8:45,5,39,31,0,80	1/2:2,7,9:19:202,127,208,93,0,154
+chr21	41608020	chr21:41608020:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,11:13:209,37,0	1/1:1,16:19:255,37,0
+chr21	41618017	chr21:41618017:M	ACACACACACACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,13:33:153,0,255	1/1:0,7:7:127,21,0	0/1:18,9:31:114,0,255
+chr21	41618363	chr21:41618363:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,1:2:11,14,39,0,17,11	0/0:4,0,0:4:0,12,107,12,76,65	1/2:0,6,5:13:226,70,49,109,0,78
+chr21	41619085	chr21:41619085:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	3/3:0,0,1,27:28:255,255,255,255,255,255,81,84,64,0	1/3:1,16,1,7:25:255,173,155,255,100,255,255,0,255,255	2/3:2,0,12,13:27:255,255,255,196,227,154,145,214,0,160
+chr21	41621516	chr21:41621516:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,2:34:0,61,255	0/1:16,11:29:110,0,218	0/0:31,1:32:0,76,255
+chr21	41625239	chr21:41625239:M	TTTGTTTGTTTGCTTGCTTGCTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:1,39:40:255,99,0	1/1:0,29:30:255,87,0	1/1:0,39:39:255,115,0
+chr21	41640303	chr21:41640303:M	TTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<41>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:88,9,0	1/1:0,3:3:88,9,0	1/1:0,3:6:108,13,0
+chr21	41643176	chr21:41643176:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:55,9,0	1/1:0,2:2:34,6,0	0/0:6,0:10:0,10,113
+chr21	41649136	chr21:41649136:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:255,43,0	0/1:4,9:17:125,0,39	1/1:0,22:22:255,65,0
+chr21	41649300	chr21:41649300:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,2:4:35,44,74,0,15,7	1/2:4,4,4:12:44,10,89,10,0,91	1/2:1,2,5:10:102,90,146,20,0,33
+chr21	41649806	chr21:41649806:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:36,0,36	0/1:4,5:9:59,0,42	0/1:3,10:14:133,0,21
+chr21	41655264	chr21:41655264:M	AAATAAATAAATATAAATAAATAAATAAATAAAAAATAAA	<13.2>,<14.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,6,7:13:255,134,98,116,0,78	2/2:0,0,2:4:86,66,60,12,11,0	1/1:0,13,0:13:255,39,0,255,38,246
+chr21	41655940	chr21:41655940:M	CACACACACACACACACACACACACACACAC	<17.5>,<18.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,6,6,0:15:255,100,66,107,0,96,255,107,131,255	2/3:0,1,2,7:12:252,208,200,194,176,192,53,8,0,39	1/3:0,9,0,4:13:255,107,80,255,106,240,238,0,158,231
+chr21	41655976	chr21:41655976:M	AAAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21,0:21:255,63,0,255,62,255	1/2:0,5,3:8:195,51,28,84,0,62	1/2:0,12,5:17:255,88,39,209,0,162
+chr21	41657977	chr21:41657977:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:7:30,0,48	0/0:1,0:2:0,6,27	1/1:0,1:1:16,3,0
+chr21	41661694	chr21:41661694:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:6,0,7:13:158,177,255,0,152,129	0/1:10,12,0:25:255,0,235,255,255,255	1/2:0,10,12:23:255,255,255,255,0,229
+chr21	41672608	chr21:41672608:M	CACACATACACCACACACAGCACTCCCTCACACACACAAACCACACACACACCACAAACACCACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:13,14:27:82,0,255	0/1:14,10:24:44,0,255	0/1:15,9:24:33,0,255
+chr21	41675869	chr21:41675869:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:30:96,0,212	0/0:32,1:34:0,82,255	1/1:0,29:32:255,78,0
+chr21	41675879	chr21:41675879:M	AATAATAATAAT	<2.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:18,8:30:118,0,255	0/0:35,0:39:0,117,255	1/1:0,6:11:166,24,0
+chr21	41676677	chr21:41676677:M	TTTTCTTTTTTCTTTCTTTTTTTTCTTTTTTTTTT	<36>,<38>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17,1:18:255,50,0,255,26,255	0/1:12,8,0:21:77,0,155,137,212,255	2/2:0,0,4:4:109,108,107,12,12,0
+chr21	41679699	chr21:41679699:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:37:206,0,255	0/0:33,0:35:0,102,255	0/1:21,16:39:194,0,255
+chr21	41680430	chr21:41680430:M	AAAAAAAAAAACAAAACAAACAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,17,15:36:255,255,255,255,0,255	0/2:21,1,17:41:255,255,255,0,255,255	0/1:16,16,0:32:200,0,199,255,255,255
+chr21	41693196	chr21:41693196:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8:16:181,0,95	0/0:15,0:17:0,45,255	0/1:9,12:24:255,0,186
+chr21	41713084	chr21:41713084:M	TTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:31:255,0,255	0/1:10,10:24:230,0,227	1/1:0,32:34:255,101,0
+chr21	41723807	chr21:41723807:M	AAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAGAAAAA	<39>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:18:255,35,0	1/1:2,16:18:241,19,0	1/1:2,20:22:255,29,0
+chr21	41725128	chr21:41725128:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:20:0,58,255	0/1:3,3:7:29,0,39	0/0:19,0:19:0,55,255
+chr21	41726444	chr21:41726444:M	TCCTCCTCCCTCTCTCCTTCTTTCTCCTCCTCCTCCTCTTGTTCTTCTTCTTCCTCCTTCCTGCTCCTCCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTC	<15.3>	.	.	Motif=TCC	GT:AD:DP:PL	1/1:0,4:6:163,15,0	1/1:0,1:2:35,3,0	1/1:0,0:2:49,6,0
+chr21	41726591	chr21:41726591:M	CTTCTTCTTCTT	<3>	.	.	Motif=CTT	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,16:19:255,56,0	1/1:0,26:27:255,79,0
+chr21	41728907	chr21:41728907:M	ATGAATGAATGAATGAATGAATGAA	<7.2>	.	.	Motif=ATGA	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:16,14:30:166,0,202	0/0:40,0:40:0,118,255
+chr21	41731772	chr21:41731772:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/1:17,12:29:121,0,207	0/0:47,1:49:0,126,255
+chr21	41736023	chr21:41736023:M	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	<13>,<17>,<45>	.	.	Motif=CTT	GT:AD:DP:PL	1/2:0,15,7,1:24:255,190,150,158,0,255,255,185,255,255	2/3:0,0,11,6:17:255,255,255,63,63,30,255,255,0,255	1/1:3,22,0,0:33:255,53,0,255,78,255,255,95,255,255
+chr21	41736057	chr21:41736057:M	TTATTATTATTATTATTATTATTATTATTATTAATATT	<11.7>,<13.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	2/3:1,0,11,7:19:223,255,255,70,84,31,90,131,0,89	0/3:2,0,1,4:8:71,87,129,36,55,40,0,25,13,26	1/2:2,11,6,1:23:156,56,89,135,0,234,181,62,255,255
+chr21	41749890	chr21:41749890:M	AAAAAAAAAAAAAAAAAAAAGAAAAGAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:4:0,12,69	0/1:5,3:8:27,0,60	0/0:6,1:7:0,3,85
+chr21	41758022	chr21:41758022:M	ATATATATATATATATATATA	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,8:10:230,29,0	1/1:0,0:1:14,3,0	1/1:0,5:7:165,21,0
+chr21	41758042	chr21:41758042:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15.5>,<16.5>,<19.5>	.	.	Motif=AG	GT:AD:DP:PL	2/2:0,1,16,0:17:167,151,148,44,34,0,217,198,51,255	2/3:0,0,1,6:10:99,113,182,110,160,153,5,4,0,2	1/2:0,5,13,0:18:177,96,81,49,0,3,228,134,56,255
+chr21	41777706	chr21:41777706:M	CACACACATCACACACACACACACACACACACACACACACACACAC	<15>,<19>,<20>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,9,7:16:255,255,255,129,129,82,165,165,0,118	1/3:0,11,0,12:25:255,255,255,255,208,255,255,0,255,255	2/2:0,0,22,0:22:255,255,255,66,66,0,255,255,65,255
+chr21	41778783	chr21:41778783:M	TTTTGTTTTTTTTTTTTTTT	<21>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,21,0:24:255,52,0,255,70,255	1/2:2,7,4:16:238,133,133,102,0,255	1/1:4,18,0:25:238,5,0,255,70,255
+chr21	41780812	chr21:41780812:M	AGAAAGAAAGGAAAGGAAGAAAGGAAGGAAAGGAAGAAAGAAAGAAAG	<14>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:4,4:9:76,0,72	0/1:5,8:13:164,0,79	0/0:20,0:20:0,60,255
+chr21	41780859	chr21:41780859:M	GGAGGGAGGGAGGGAG	<1.5>	.	.	Motif=GGAG	GT:AD:DP:PL	0/0:16,1:21:0,26,255	0/1:4,3:8:59,0,86	0/0:39,0:41:0,123,255
+chr21	41780953	chr21:41780953:M	AAGGAAGGAAGGAGGGGAGGGAGGAGAGGGAGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	<14.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/0:0,0:1:0,0,0	.	1/1:0,3:3:67,9,0
+chr21	41781016	chr21:41781016:M	AGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGG	<4.8>,<7.8>,<8.8>,<33.8>	.	.	Motif=AGGG	GT:AD:DP:PL	3/4:0,1,1,2,4:8:70,53,88,49,29,46,43,18,31,35,35,50,11,0,70	1/1:0,6,0,0,1:9:171,17,0,170,18,168,172,18,170,173,161,7,160,162,159	2/3:0,0,4,3,0:7:109,129,212,28,37,16,47,49,0,28,129,221,37,49,246
+chr21	41782244	chr21:41782244:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,28	0/1:2,3:5:64,0,39	0/0:5,0:5:0,15,137
+chr21	41783093	chr21:41783093:M	TTTTTTTTTTTGTTTTTTTTTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,12:24:255,211,255,255,0,255	1/2:0,9,10:22:255,176,224,238,0,196	2/2:0,0,26:27:255,255,255,79,78,0
+chr21	41784640	chr21:41784640:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:15:255,43,0	1/1:1,12:14:201,24,0	1/1:0,20:23:255,66,0
+chr21	41786173	chr21:41786173:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAAA	<41>,<44>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:7:158,75,63,83,0,74	1/2:0,9,5:14:255,117,90,225,0,210	1/1:0,11,0:11:255,33,0,255,33,255
+chr21	41787018	chr21:41787018:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,11,6:18:255,88,55,148,0,156	2/2:1,1,17:20:255,255,255,28,29,0	0/1:9,23,0:32:255,0,65,255,157,255
+chr21	41787320	chr21:41787320:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,14,1,3:20:255,72,40,255,53,255,255,0,255,255	1/2:2,12,7,0:23:255,83,179,255,0,255,255,209,255,255	3/3:0,0,0,6:6:187,187,187,182,182,178,18,18,18,0
+chr21	41790393	chr21:41790393:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:12:104,0,107	0/1:3,4:7:92,0,63	0/0:3,0:6:0,12,94
+chr21	41791048	chr21:41791048:M	TTTTTTTTGTTTGTTTTATTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,29:29:255,85,0	1/1:0,24:25:255,73,0
+chr21	41793165	chr21:41793165:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,6:14:255,117,80,109,0,88	2/2:0,0,18:20:255,255,255,60,58,0	1/1:0,14,1:15:255,44,0,237,26,234
+chr21	41794539	chr21:41794539:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,2:4:82,30,24,35,0,24	0/1:1,3,1:8:85,0,33,46,20,64	2/2:1,0,6:7:88,91,116,3,20,0
+chr21	41797812	chr21:41797812:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:4:28,0,6	0/0:4,0:4:0,12,67	1/1:0,5:8:99,18,0
+chr21	41798025	chr21:41798025:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:30:140,0,191	0/1:22,13:37:129,0,255	0/0:27,1:30:0,69,255
+chr21	41803964	chr21:41803964:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,11:15:157,0,29	0/1:9,12:21:145,0,95	1/1:0,23:27:255,75,0
+chr21	41805703	chr21:41805703:M	CACCACCATCACCACCATAAGCACCACCACCACCA	<45>	.	.	Motif=CAC	GT:AD:DP:PL	0/1:19,10:29:37,0,255	0/1:25,17:42:87,0,255	0/0:17,4:21:0,13,255
+chr21	41805810	chr21:41805810:M	CCATCACCATTACCAACACCATCACCACCAACACAACCACCTCCATCACCATTAACAACACCATCACCA	<4.5>,<10.5>	.	.	Motif=CCATCA	GT:AD:DP:PL	1/2:1,10,4:18:255,35,75,255,0,255	0/1:4,6,0:12:168,0,78,179,46,214	1/2:0,8,5:16:255,57,91,255,0,251
+chr21	41807064	chr21:41807064:M	ACCACCATCTCCACCACTACCTCCACCACCA	<45>	.	.	Motif=ACC	GT:AD:DP:PL	0/0:27,6:33:0,35,255	0/1:17,10:27:26,0,255	0/0:20,4:24:0,29,255
+chr21	41809228	chr21:41809228:M	TTTTTTCTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:20:0,41,255	0/1:6,5:11:53,0,71	0/0:19,0:19:0,56,255
+chr21	41811468	chr21:41811468:M	AAAATAAAATAAAATAAAATAAAATAAAATAA	<5.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:16,8:24:75,0,220	0/0:18,0:18:0,53,255
+chr21	41811681	chr21:41811681:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,8:14:255,144,105,88,0,53	1/2:0,8,5:15:255,86,43,152,0,115	1/1:0,15,0:15:255,45,0,255,44,255
+chr21	41816895	chr21:41816895:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,37:41:255,65,0	1/1:0,24:26:255,75,0	1/1:1,27:30:255,67,0
+chr21	41823030	chr21:41823030:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:21,0,103	0/0:5,0:7:0,17,94	0/1:5,3:8:29,0,63
+chr21	41836425	chr21:41836425:M	CCTGGCCCTGGCCC	<2.5>	.	.	Motif=CCTGGC	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:19,11:30:189,0,255	0/0:30,0:30:0,90,255
+chr21	41840443	chr21:41840443:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:10:93,0,23	0/1:7,4:11:35,0,85	0/1:1,3:5:47,0,3
+chr21	41843951	chr21:41843951:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,5:13:35,71,206,0,93,78	1/2:2,3,4:12:67,42,84,28,0,62	0/0:14,2,0:16:0,17,170,45,176,222
+chr21	41844415	chr21:41844415:M	ACACACACACACACACACACACACACACACACACACACACACACA	<16.5>,<17.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,5:10:194,149,194,75,133,119,133,75,0,119	1/1:0,5,0,0:7:147,14,0,86,14,73,139,5,77,136	0/2:1,0,4,0:6:116,69,83,0,26,12,119,83,15,131
+chr21	41844710	chr21:41844710:M	ACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:4:58,9,0	1/1:0,2:3:37,6,0	1/1:0,0:2:0,0,0
+chr21	41849560	chr21:41849560:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:29:208,0,146	0/1:19,19:39:226,0,218	1/1:0,42:44:255,129,0
+chr21	41863169	chr21:41863169:M	AAAAAGAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:28:46,0,255	0/0:22,0:24:0,59,255	0/1:14,3:18:1,0,202
+chr21	41868038	chr21:41868038:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:33:168,0,203	0/1:10,7:18:77,0,119	1/1:1,17:19:255,38,0
+chr21	41868677	chr21:41868677:M	TTTTCCTTTTTCTTTTTCTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTC	GT:AD:DP:PL	0/0:11,1:12:0,11,250	0/1:6,2:8:24,0,125	1/1:0,10:11:255,32,0
+chr21	41869440	chr21:41869440:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:8:94,5,0	0/1:3,4:7:49,0,31	0/1:7,2:9:9,0,99
+chr21	41874503	chr21:41874503:M	ATATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:1,0,11:12:55,90,252,18,35,0	1/2:0,2,8:13:30,32,142,11,0,13	1/2:0,3,2:6:47,11,27,46,0,52
+chr21	41874526	chr21:41874526:M	TTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:108,12,0	1/1:0,0:4:10,3,0	1/1:0,1:6:105,15,0
+chr21	41886660	chr21:41886660:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,94,0	0/1:20,13:35:134,0,244	1/1:2,39:43:255,90,0
+chr21	41889629	chr21:41889629:M	TTTTTTTTCTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,23:37:255,0,135	0/1:20,21:42:255,0,230	0/0:28,2:32:0,57,255
+chr21	41905311	chr21:41905311:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:72,0,104	0/1:5,6:12:124,0,101	1/1:0,6:6:156,18,0
+chr21	41908244	chr21:41908244:M	TGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/1:8,9:18:208,0,167	0/1:14,8:22:152,0,255
+chr21	41909999	chr21:41909999:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:14:0,39,255	0/1:10,21:33:255,0,193	0/1:13,15:34:255,0,255
+chr21	41911389	chr21:41911389:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/0:6,0:6:0,18,102	0/1:8,3:12:20,0,108
+chr21	41914295	chr21:41914295:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,2:19:0,20,255	0/1:7,13:22:160,0,75	0/1:14,10:27:106,0,189
+chr21	41916665	chr21:41916665:M	ACACACACACACACACACACACACACACACACACACACACAC	<17>,<18>,<20>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,1,27,0:28:255,255,255,84,64,0,255,255,84,255	2/3:0,3,14,9:26:255,255,255,153,189,185,255,187,0,255	1/2:0,14,6,0:20:255,107,48,248,0,190,255,106,248,255
+chr21	41921755	chr21:41921755:M	TGTGTGTGTGTGTAGTGTGTGTGTGTAATGTGTAGTGTGTGTG	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,21:21:255,62,0	0/1:15,13:28:154,0,188	1/1:0,27:27:255,80,0
+chr21	41922150	chr21:41922150:M	TCTTCTTCTTCTTCTT	<3.7>	.	.	Motif=TCT	GT:AD:DP:PL	1/1:0,5:7:134,21,0	0/1:15,3:20:4,0,255	1/1:0,3:5:92,15,0
+chr21	41922164	chr21:41922164:M	TTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,9:14:239,0,23	0/1:19,7:29:125,0,255	1/1:0,13:20:255,6,0
+chr21	41922239	chr21:41922239:M	ACCTCCACCTCC	<2.5>	.	.	Motif=ACCTCC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	0/1:18,15:33:255,0,255	1/1:0,42:42:255,126,0
+chr21	41922477	chr21:41922477:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26,2:29:255,81,0,255,48,255	1/2:0,12,11:24:255,162,124,217,0,153	1/1:0,26,0:27:255,81,0,255,79,255
+chr21	41923000	chr21:41923000:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,3:40:0,62,255	0/1:13,18:31:225,0,137	0/0:28,3:31:0,37,255
+chr21	41928545	chr21:41928545:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,7:8:208,120,98,24,7,0	0/2:0,0,3:5:71,49,61,0,14,2	1/2:0,4,4:8:209,64,41,65,0,41
+chr21	41929103	chr21:41929103:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,10:24:113,0,179	0/0:40,0:44:0,127,255	0/1:19,19:41:222,0,250
+chr21	41931427	chr21:41931427:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	1/1:0,6:6:104,18,0	0/1:13,9:22:95,0,166
+chr21	41933261	chr21:41933261:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	1/1:0,23:23:255,68,0	0/1:15,22:37:255,0,167
+chr21	41934857	chr21:41934857:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:33:255,0,255	0/0:29,0:31:0,90,255	0/1:16,17:35:255,0,255
+chr21	41936816	chr21:41936816:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,145	0/1:1,0:3:17,0,22	0/1:5,7:14:215,0,101
+chr21	41938743	chr21:41938743:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,9:16:135,0,43	0/0:13,2:16:0,12,198	0/1:4,7:13:96,0,42
+chr21	41944522	chr21:41944522:M	AAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,1:4:17,26,65,0,28,23	1/1:1,4,0:7:53,0,0,67,14,116	1/2:1,6,3:11:115,35,57,94,0,155
+chr21	41947113	chr21:41947113:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCTCTC	<33.8>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:0,3:4:26,0,0	1/1:0,4:4:49,11,0	0/1:0,4:6:35,0,2
+chr21	41954912	chr21:41954912:M	GTGTGTGTGGTGTGTGTGTGTGGTGTGTGTGTGTGATGTGT	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/0:16,0:16:0,48,255	0/1:10,11:21:255,0,204
+chr21	41956052	chr21:41956052:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,120,0	1/1:0,15:18:255,50,0	0/1:9,8:17:166,0,193
+chr21	41962113	chr21:41962113:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,79,0	1/1:2,21:23:255,33,0	1/1:1,31:36:255,84,0
+chr21	41968732	chr21:41968732:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:11:198,32,0	0/1:10,3:15:18,0,137	0/1:10,5:16:41,0,139
+chr21	41971967	chr21:41971967:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:37:0,91,255	0/0:40,0:42:0,122,255	0/1:19,13:34:140,0,255
+chr21	41978347	chr21:41978347:M	TTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,151	0/1:5,2:7:14,0,64	0/1:6,4:12:46,0,84
+chr21	41982836	chr21:41982836:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,49:53:255,100,0	1/1:1,37:39:255,97,0	1/1:2,39:43:255,80,0
+chr21	41986007	chr21:41986007:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:8,0,18	0/1:7,4:12:40,0,78	0/0:2,0:3:0,8,43
+chr21	41997576	chr21:41997576:M	AAAAAAAAAAAAAACAAAAAAACAAAAAAACAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:27,1:28:0,65,255	0/1:9,9:21:119,0,109
+chr21	42004005	chr21:42004005:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:21:0,43,255	0/0:18,4:25:0,2,255	0/1:8,8:16:98,0,98
+chr21	42008541	chr21:42008541:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAGAAAAGAAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:128,15,0	0/1:2,2:4:49,0,48	1/1:0,4:5:125,15,0
+chr21	42010439	chr21:42010439:M	GGGCGGGGCGGGGGGGG	<3.2>	.	.	Motif=GGGCG	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,15:15:255,45,0	0/1:8,5:13:62,0,123
+chr21	42011205	chr21:42011205:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:30:255,88,0	0/1:24,16:41:165,0,255	1/1:0,40:41:255,120,0
+chr21	42011707	chr21:42011707:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:35:0,83,255	0/0:26,0:27:0,79,255	0/1:17,17:35:206,0,216
+chr21	42014899	chr21:42014899:M	TTTGTTTTGTTTTGTTTTGTTTTGTTTTTGTTTT	<5.8>	.	.	Motif=TTTGT	GT:AD:DP:PL	1/1:0,37:37:255,110,0	1/1:0,35:35:255,103,0	1/1:0,42:42:255,124,0
+chr21	42015810	chr21:42015810:M	TGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,36:36:255,106,0	0/1:21,24:45:255,0,255
+chr21	42017479	chr21:42017479:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,1,9:12:155,124,144,14,8,0	2/2:4,5,21:30:255,231,255,18,2,0	1/2:0,6,13:20:255,189,168,113,0,58
+chr21	42024967	chr21:42024967:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<18>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,20:34:255,255,255,255,0,255	1/1:0,37,0:39:255,117,0,255,117,255	2/2:0,0,19:23:255,255,255,65,65,0
+chr21	42027690	chr21:42027690:M	TGTGTGTTTGTGGTGTGTGTGTGGTGTGATGTGGCATATGTTGTGTGTTGTGTGGTGTGTGTG	<32>	.	.	Motif=TG	GT:AD:DP:PL	0/0:6,0:8:0,15,50	0/0:7,1:8:0,11,50	0/1:10,5:15:6,0,47
+chr21	42032535	chr21:42032535:M	TTTTTTTTTTGTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:32,1:36:0,86,255	0/1:16,15:31:183,0,200
+chr21	42049131	chr21:42049131:M	CAAAAAAAAAAACAAAAACAAAAACAAAAA	<4.8>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:8,15:23:255,0,110	0/1:17,13:31:204,0,255	0/1:13,15:29:248,0,210
+chr21	42053867	chr21:42053867:M	TTTTTTTTTTTTTTTTGTATTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:26:177,0,255	0/1:11,4:16:71,0,249	0/1:14,5:21:76,0,255
+chr21	42069230	chr21:42069230:M	ACACACACACACACACACACACACACACACACACACACA	<25.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,5:18:111,130,255,0,255,255	0/2:12,0,2:16:40,59,255,0,255,255	0/1:11,5,0:20:112,0,255,151,255,255
+chr21	42072044	chr21:42072044:M	CAAACAAACAAACAAACAAACAAA	<7>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:22,21:46:255,0,255	0/1:25,14:40:136,0,255	0/1:20,15:38:190,0,255
+chr21	42073008	chr21:42073008:M	GTGTGTGTGTGTGTGCGCGCGCGCGTGTGTGTGTGTGCGTGTG	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,13:32:143,0,234	0/1:8,7:15:77,0,94	0/1:21,10:32:92,0,255
+chr21	42077003	chr21:42077003:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<26.5>,<30.5>,<31.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,3,0:11:225,68,53,161,0,152,200,39,161,191	1/3:0,7,0,4:13:243,50,73,243,50,243,203,0,203,192	2/2:0,0,5,0:8:152,156,167,22,20,0,106,103,21,90
+chr21	42092386	chr21:42092386:M	TTTTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:234,0,214	1/1:1,41:42:255,106,0	0/0:38,0:39:0,112,255
+chr21	42104409	chr21:42104409:M	TTTCTTTTCTTTTTTTCTTTTCTTTTTTTTCTTTTTCTTTTCTTTTCTTTTTTTT	<10.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:10,10:20:101,0,101	0/0:9,0:9:0,26,143	0/1:8,10:18:107,0,75
+chr21	42109124	chr21:42109124:M	ACCCCCACCCCC	<1.8>	.	.	Motif=ACCCCC	GT:AD:DP:PL	0/1:18,12:30:220,0,255	0/0:31,0:31:0,93,255	0/1:14,7:21:114,0,255
+chr21	42121369	chr21:42121369:M	GTGTGTGTGTGTGTGTGTGATGTATGTGT	<13.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,21:31:255,255,255,188,0,235	0/1:15,17,0:33:230,0,175,255,229,255	0/2:20,1,6:27:34,94,255,0,255,255
+chr21	42122565	chr21:42122565:M	GTGTGTGCGTGCGTGTGTGCATGTGTGTGCATGTGTGTG	<7.2>	.	.	Motif=GTGT	GT:AD:DP:PL	0/1:14,17:31:255,0,255	0/1:14,16:30:255,0,255	0/0:34,0:34:0,102,255
+chr21	42122633	chr21:42122633:M	GTGTGTGTACGTGTGTGTGCATATGTGTGCGTGTGTGTGTGTGTGTGTG	<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,8:20:81,0,150	0/1:9,10:19:110,0,91	0/0:17,0:17:0,50,255
+chr21	42123481	chr21:42123481:M	GTGTGTGTGTGTGAGTGT	<4>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,10:34:167,0,255	0/1:20,14:36:255,0,255	0/0:43,0:44:0,132,255
+chr21	42130222	chr21:42130222:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<14.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,21,14,0:35:255,255,158,255,0,255,255,221,255,255	1/3:2,16,1,20:39:255,255,255,255,255,255,246,0,255,255	2/3:0,0,22,15:37:255,255,255,255,255,164,255,255,0,255
+chr21	42133889	chr21:42133889:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTCGTTTTGTTTTGTTT	<11.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,19:20:255,57,0	1/1:0,12:12:255,36,0	1/1:0,34:34:255,102,0
+chr21	42134781	chr21:42134781:M	TTTTTTTTTTTTTTATATTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,9:17:255,173,217,128,0,150	1/1:0,24,0:25:255,73,0,255,75,255	1/2:0,11,3:14:215,53,43,197,0,255
+chr21	42138579	chr21:42138579:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,3:32:0,38,255	0/1:13,20:33:255,0,133	0/1:20,14:35:153,0,255
+chr21	42149269	chr21:42149269:M	AAATAAATAAGTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/2:0,0,14:14:255,255,255,41,42,0	1/2:0,6,3:9:199,53,62,156,0,150	1/2:0,9,7:16:255,128,153,234,0,216
+chr21	42161052	chr21:42161052:M	CACAACACACAGACACACAAAGACACGGACAGACACAGATACACACACAGACACACACACACACACACACACACACA	<35.5>,<37.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,16,0:17:255,51,0,255,51,255	1/2:0,7,3:11:233,55,54,178,0,164	1/2:0,6,3:9:200,54,58,153,0,142
+chr21	42161422	chr21:42161422:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,78,0	0/1:6,18:25:255,0,85	0/1:7,12:20:255,0,132
+chr21	42168322	chr21:42168322:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:52,0,11	1/1:0,5:6:94,17,0	1/1:0,4:4:68,12,0
+chr21	42175111	chr21:42175111:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:99,14,0	0/1:3,0:8:17,0,61	0/0:4,0:6:0,4,103
+chr21	42177137	chr21:42177137:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,8:14:208,98,110,60,0,40	0/0:1,0,0:2:0,3,29,3,19,17	1/2:0,0,2:4:38,27,25,9,0,4
+chr21	42185407	chr21:42185407:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,8:11:255,139,108,52,0,20	.	1/2:0,2,3:7:137,51,34,43,0,28
+chr21	42189419	chr21:42189419:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:27,24:51:255,0,255	0/1:17,27:44:255,0,180
+chr21	42192481	chr21:42192481:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:13,17:31:255,0,255	0/1:15,18:33:255,0,255
+chr21	42200597	chr21:42200597:M	TTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:28:0,83,255	0/1:9,5:16:97,0,206	0/0:13,0:16:0,28,255
+chr21	42206352	chr21:42206352:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:32,0:32:0,92,255	0/1:11,4:15:15,0,117	0/1:10,8:18:66,0,97
+chr21	42206874	chr21:42206874:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/1:19,14:34:147,0,245	0/1:19,18:40:223,0,241
+chr21	42210960	chr21:42210960:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:9:122,9,0	0/0:15,2:18:0,7,204	0/1:8,5:14:55,0,96
+chr21	42212706	chr21:42212706:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:4,5:10:109,0,78	0/1:12,6:20:112,0,255
+chr21	42219223	chr21:42219223:M	CCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC	<8.7>	.	.	Motif=CCG	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:13,9:22:189,0,255	0/1:18,18:37:255,0,255
+chr21	42241605	chr21:42241605:M	AAAAAAAAAAAATAACAAAAAAAAAACAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,17:31:255,0,255	0/0:22,0:22:0,66,255	0/1:11,15:28:255,0,213
+chr21	42241821	chr21:42241821:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:27:114,0,209	0/0:24,1:27:0,61,255	0/1:9,14:26:196,0,90
+chr21	42241978	chr21:42241978:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:13:0,29,166	0/1:10,4:15:34,0,122	0/0:7,1:9:0,9,111
+chr21	42243436	chr21:42243436:M	GTGTGTGTGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<24.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,7:18:255,122,152,255,0,243	2/2:0,0,13:16:254,255,255,46,39,0	1/2:0,6,9:15:255,153,214,158,0,128
+chr21	42268363	chr21:42268363:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,10:17:255,255,250,131,0,110	0/2:10,0,11:22:251,255,255,0,226,232	0/1:15,5,0:23:57,0,255,117,255,255
+chr21	42268389	chr21:42268389:M	GCGCGCGCGCGC	<7>	.	.	Motif=GC	GT:AD:DP:PL	1/1:0,12:14:207,40,0	0/1:14,7:25:74,0,142	0/0:21,0:21:0,61,255
+chr21	42270260	chr21:42270260:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:54,0,3	0/1:7,5:13:53,0,77	0/1:8,3:11:18,0,103
+chr21	42296625	chr21:42296625:M	TTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:28:248,255,255,0,243,255	1/2:1,18,16:38:255,255,255,255,0,255	0/1:24,17,0:44:193,0,255,255,255,255
+chr21	42300358	chr21:42300358:M	CACACGCACACACACACATGCACACACACTCACATGGACACACACATACACACACATACACACACATACATGCACACACA	<24>,<25>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,0,4:8:117,54,96,0,53,41	1/1:0,3,0:4:102,9,0,49,8,40	0/1:3,2,1:7:91,0,68,26,66,95
+chr21	42305366	chr21:42305366:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGTTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/1:12,21:33:255,0,120	0/1:16,9:25:95,0,227
+chr21	42320721	chr21:42320721:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,44:45:255,114,0	0/1:19,14:33:158,0,244	1/1:0,36:36:255,106,0
+chr21	42326738	chr21:42326738:M	AAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:37:255,110,0	1/1:0,27:35:255,102,0	1/1:0,33:39:255,114,0
+chr21	42327038	chr21:42327038:M	AAAAAAAAGAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:36:255,105,0	1/1:1,35:37:255,91,0	1/1:0,38:39:255,114,0
+chr21	42341434	chr21:42341434:M	TTTTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:1,7:9:120,9,0	0/1:4,7:11:94,0,39
+chr21	42342753	chr21:42342753:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<18>,<19>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:1,15,0:16:255,28,0,255,47,255	1/2:0,1,1:2:41,17,12,15,0,12	1/2:0,5,5:10:204,89,62,77,0,62
+chr21	42359401	chr21:42359401:M	TTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTT	<78>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:224,27,0	1/1:0,7:7:182,21,0	1/1:0,7:7:183,21,0
+chr21	42362901	chr21:42362901:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,5:9:64,0,38	1/1:1,13:18:245,34,0	0/1:5,5:10:58,0,59
+chr21	42368726	chr21:42368726:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/0:30,0:30:0,88,255	0/1:22,17:39:197,0,255
+chr21	42378871	chr21:42378871:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>,<8.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/2:0,10,14:24:255,255,255,191,0,224	0/2:8,1,6:15:66,90,255,0,105,114	1/2:0,12,5:17:255,93,96,223,0,255
+chr21	42384157	chr21:42384157:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17,0:40:218,0,255,255,255,255	0/2:9,1,14:24:175,225,255,0,115,97	0/1:19,22,1:43:255,0,227,255,255,255
+chr21	42385023	chr21:42385023:M	CCCTCCCTCTCTTCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCCCTTCCTC	<2.2>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:5,3:8:47,0,91	0/1:3,2:5:31,0,55	0/1:4,1:7:8,0,78
+chr21	42387372	chr21:42387372:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/2:16,0,8:25:160,210,255,0,255,255	0/0:16,0,0:16:0,47,255,48,255,255	1/2:1,13,7:22:255,164,141,214,0,255
+chr21	42392561	chr21:42392561:M	ATGAATGAATGA	<4>	.	.	Motif=ATGA	GT:AD:DP:PL	0/1:24,25:49:255,0,255	1/1:0,35:35:255,103,0	0/0:58,0:58:0,171,255
+chr21	42393245	chr21:42393245:M	AAGAAAAAGAAAAAAAAAAAG	<3.3>	.	.	Motif=AAGAAA	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,37:37:255,110,0	1/1:0,43:43:255,128,0
+chr21	42401268	chr21:42401268:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:23:84,0,178	0/1:12,9:23:87,0,157	0/0:14,1:16:0,29,238
+chr21	42401422	chr21:42401422:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:25:186,0,234	0/1:6,5:19:113,0,131	0/0:24,0:26:0,72,255
+chr21	42402099	chr21:42402099:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20:45:255,0,255	0/1:9,12:24:255,0,198	0/0:44,0:45:0,135,255
+chr21	42405984	chr21:42405984:M	GGGGGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:90,9,0	0/0:1,0:1:0,3,30	1/1:0,1:4:43,6,0
+chr21	42408884	chr21:42408884:M	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<14.8>,<15.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/2:0,3,7:10:242,135,107,50,0,29	2/2:0,0,0:1:0,0,0,0,0,0	1/1:0,6,0:6:114,18,0,114,18,114
+chr21	42410779	chr21:42410779:M	CACACACACACACACACAGATAGACACAGAGACACACACATAGCTCACACACATAGACACACACA	<8>,<9>,<31.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,4,0,6:16:70,0,215,63,227,255,9,0,63,70	2/3:3,1,3,4:12:91,56,171,25,137,141,40,30,0,63	0/2:14,0,6,0:20:115,93,255,0,255,255,156,255,218,255
+chr21	42417420	chr21:42417420:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:6:32,0,73	1/1:0,3:4:100,12,0	0/0:4,0:5:0,15,130
+chr21	42417860	chr21:42417860:M	TTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,3:5:70,0,10	1/1:0,1:1:29,3,0	0/0:1,0:1:0,3,30
+chr21	42447788	chr21:42447788:M	ACACACACACACACACACACACACACACAGGCACATACACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23,0:24:255,72,0,255,72,255	0/1:13,7,0:23:164,0,255,195,223,255	1/2:0,3,9:13:215,152,234,84,0,55
+chr21	42450511	chr21:42450511:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:209,3,0	0/1:9,4:14:74,0,197	1/1:0,6:6:161,18,0
+chr21	42458220	chr21:42458220:M	TATTATTATTATTATTATTATTATTATTATTATTA	<8.7>,<12.7>,<15.7>	.	.	Motif=TAT	GT:AD:DP:PL	1/2:0,20,10,0:30:255,190,221,255,0,255,255,255,255,255	1/2:0,13,3,0:16:255,54,45,255,0,255,255,84,255,255	1/3:0,18,0,8:26:255,225,171,255,225,255,255,0,255,255
+chr21	42463782	chr21:42463782:M	AAAAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19,0:34:255,0,255,255,255,255	0/1:6,17,1:32:255,0,143,255,113,255	1/2:1,14,13:33:255,218,255,255,0,255
+chr21	42464909	chr21:42464909:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,1:22:0,19,255	0/0:8,0:14:0,30,244	1/1:0,9:16:238,22,0
+chr21	42466459	chr21:42466459:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:255,36,0	1/1:0,17:21:255,51,0	0/0:0,0:2:0,0,0
+chr21	42470031	chr21:42470031:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1,0:33:0,79,255,97,255,255	0/2:12,1,15:28:184,244,255,0,161,143	0/1:12,17,0:29:227,0,135,255,186,255
+chr21	42473490	chr21:42473490:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:20:255,58,0	1/1:0,18:23:255,64,0	1/1:2,20:28:255,43,0
+chr21	42479727	chr21:42479727:M	ACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,6:19:255,108,54,200,0,182	0/1:14,13,0:28:143,0,171,188,248,255	1/2:0,15,10:25:255,176,105,225,0,194
+chr21	42480641	chr21:42480641:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:23,0,16	0/1:3,3:6:32,0,32	0/0:2,0:2:0,6,34
+chr21	42483990	chr21:42483990:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:30,20:50:238,0,255	0/1:14,16:30:201,0,165	0/1:37,23:60:255,0,255
+chr21	42494705	chr21:42494705:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13,1:29:192,0,150,246,173,255	0/2:5,0,9:14:118,157,255,0,74,47	0/1:17,9,0:26:88,0,235,162,255,255
+chr21	42503249	chr21:42503249:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,7:19:67,0,157	1/1:2,11:14:151,4,0	0/1:9,5:17:38,0,134
+chr21	42512077	chr21:42512077:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:2,36:39:255,79,0	1/1:0,51:52:255,153,0
+chr21	42519958	chr21:42519958:M	GTGTGTTTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:36:0,102,255	0/1:15,16:33:182,0,185	0/0:29,0:31:0,88,255
+chr21	42523898	chr21:42523898:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,20:43:247,0,255	1/1:1,27:29:255,67,0	0/1:13,21:36:255,0,141
+chr21	42530596	chr21:42530596:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<16>,<18>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,9:15:255,255,248,32,27,0	1/2:0,5,4:9:231,99,80,123,0,107	2/2:0,0,7:7:203,196,191,21,21,0
+chr21	42554983	chr21:42554983:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:14:0,40,207	0/1:6,6:13:63,0,49	0/1:14,5:24:11,0,175
+chr21	42557780	chr21:42557780:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,2:32:0,57,255	0/1:24,19:43:208,0,255	0/1:14,25:40:255,0,145
+chr21	42559876	chr21:42559876:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,1,3:15:39,36,193,0,180,255	1/2:0,3,6:9:187,100,76,43,0,25	0/2:11,1,5:17:87,70,217,0,176,255
+chr21	42572678	chr21:42572678:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:19,0,210	0/1:7,5:17:75,0,106	0/0:9,1:12:0,6,166
+chr21	42573340	chr21:42573340:M	TCCCCTCCCCT	<2.4>	.	.	Motif=TCCCC	GT:AD:DP:PL	0/1:24,16:40:255,0,255	0/1:9,16:25:255,0,159	0/1:19,21:40:255,0,255
+chr21	42586020	chr21:42586020:M	TATTATTATTATT	<3.7>	.	.	Motif=TAT	GT:AD:DP:PL	0/0:37,0:38:0,104,255	0/1:8,11:19:80,0,44	0/0:22,0:25:0,66,255
+chr21	42586031	chr21:42586031:M	TTTTTTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,0,21:40:255,255,255,0,255,255	0/1:5,11,0:18:255,0,100,255,133,255	0/2:11,0,11:27:253,255,255,0,255,255
+chr21	42597880	chr21:42597880:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1:20:0,41,255	0/1:13,12:26:131,0,138	0/0:28,1:30:0,70,255
+chr21	42605210	chr21:42605210:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,20:24:255,52,0	0/1:7,4:11:36,0,86	0/1:3,4:7:49,0,32
+chr21	42607028	chr21:42607028:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:72,12,0	1/1:0,10:11:171,29,0	0/1:10,7:19:70,0,134
+chr21	42608302	chr21:42608302:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,41:42:255,105,0	1/1:0,37:37:255,109,0	0/1:18,25:44:255,0,202
+chr21	42608462	chr21:42608462:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAATAAAA	<32>,<34>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:12:47,78,214,0,107,92	0/1:8,4,1:13:31,0,110,51,98,194	0/2:7,0,5:12:53,87,228,0,104,88
+chr21	42611084	chr21:42611084:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:11,6:19:49,0,153	0/0:16,0:18:0,52,255
+chr21	42612545	chr21:42612545:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,49:52:255,134,0	1/1:0,35:36:255,106,0	1/1:1,47:48:255,123,0
+chr21	42615907	chr21:42615907:M	CACACACAAATACACATACACCACACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,27:48:186,0,255	0/0:26,7:33:0,14,255	0/1:17,24:41:169,0,255
+chr21	42615966	chr21:42615966:M	ACACACACCACGCACCACCCCCACAGCACACAGAAACACATACACACCACACACACA	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,26:45:187,0,255	0/1:18,7:25:11,0,255	0/1:11,24:35:192,0,196
+chr21	42625228	chr21:42625228:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:2,27:31:255,53,0	1/1:0,29:29:255,85,0
+chr21	42639292	chr21:42639292:M	ACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/0:48,0:48:0,132,255	0/0:42,0:43:0,114,255	0/1:17,19:40:137,0,98
+chr21	42643307	chr21:42643307:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:29:255,65,0	1/1:3,27:31:255,38,0	1/1:0,41:45:255,131,0
+chr21	42648271	chr21:42648271:M	TTTTCTTTTTGTTTTTGTTTTTGTTTTTTTTTTT	<35>,<37>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,5:22:255,128,76,255,0,255	1/1:0,20,0:20:255,59,0,255,60,255	2/2:0,0,17:19:255,255,255,56,56,0
+chr21	42661035	chr21:42661035:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:22:49,0,255	0/1:17,10:31:205,0,255	0/0:30,0:33:0,95,255
+chr21	42670311	chr21:42670311:M	ACACCACACTCACATTCACAC	<4.5>	.	.	Motif=ACACTC	GT:AD:DP:PL	0/1:19,9:34:73,0,252	0/1:22,8:33:45,0,255	0/0:41,0:42:0,120,255
+chr21	42674317	chr21:42674317:M	TTTTTTTTTTTTTTTTT	<18>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,6:20:138,157,255,0,190,255	1/1:0,7,0:9:124,22,0,123,3,191	0/1:8,7,0:17:80,0,101,125,144,255
+chr21	42684983	chr21:42684983:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,25:45:255,0,243	0/1:28,12:43:139,0,255	0/0:42,0:42:0,124,255
+chr21	42693300	chr21:42693300:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,5:16:59,0,119	0/0:11,1:12:0,18,173	0/1:9,8:17:93,0,111
+chr21	42693962	chr21:42693962:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:222,0,255	0/1:21,22:43:255,0,247	0/0:43,0:43:0,127,255
+chr21	42701431	chr21:42701431:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:44:244,0,255	0/0:31,2:34:0,64,255	0/1:16,23:41:255,0,190
+chr21	42704434	chr21:42704434:M	ACACACACACACACACACACACACACACACACACACA	<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,9,4:16:219,88,76,140,0,227	0/2:9,0,3:15:53,84,226,0,167,242	0/1:10,8,0:20:81,0,137,138,189,255
+chr21	42710409	chr21:42710409:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:32:222,0,132	0/1:7,8:17:97,0,79	0/0:17,1:18:0,35,255
+chr21	42711254	chr21:42711254:M	TTTTGTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:21:12,0,230	0/1:9,15:27:199,0,87	0/0:34,0:36:0,105,255
+chr21	42713130	chr21:42713130:M	TTGTTTTTGTTTTTGTTTTTGTTTT	<5.2>	.	.	Motif=TTGTTT	GT:AD:DP:PL	0/1:24,22:46:255,0,255	0/1:18,10:28:99,0,245	0/0:36,0:36:0,106,255
+chr21	42714017	chr21:42714017:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,12:19:185,0,24	0/1:6,3:9:25,0,74	0/0:15,0:18:0,39,255
+chr21	42715189	chr21:42715189:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:109,18,0	0/1:3,3:7:42,0,31	0/1:6,5:14:51,0,81
+chr21	42717295	chr21:42717295:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:7:50,0,3,61,15,102	0/2:1,0,3:6:39,49,88,0,13,5	0/1:2,4,0:6:52,0,17,69,29,135
+chr21	42717544	chr21:42717544:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,75,0	0/1:17,14:35:255,0,255	0/1:29,11:43:174,0,255
+chr21	42717901	chr21:42717901:M	GTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTT	<11.5>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	0/1:16,14:30:255,0,255	0/1:14,7:21:126,0,255
+chr21	42719640	chr21:42719640:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:5,15:22:255,0,73	1/1:0,14:16:255,42,0
+chr21	42721972	chr21:42721972:M	TTTTTCTTTTCTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:32:255,94,0	0/1:13,18:32:235,0,137	0/1:15,26:41:255,0,154
+chr21	42726594	chr21:42726594:M	ATATATATATATATATATATATATATATATAT	<11.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,5,3:8:126,11,60,119,0,115	1/1:0,2,0:4:51,5,0,50,2,48	0/2:2,0,2:6:4,19,121,0,15,0
+chr21	42726625	chr21:42726625:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:96,5,0	.	1/1:0,0:3:37,8,0
+chr21	42727078	chr21:42727078:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:5:92,0,16	0/1:0,1:3:20,0,19	0/0:3,0:5:0,15,117
+chr21	42727490	chr21:42727490:M	TTTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:254,30,0	1/1:0,9:9:252,27,0	.
+chr21	42729000	chr21:42729000:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:11:56,0,73	0/1:9,5:14:43,0,110	0/0:32,1:35:0,82,255
+chr21	42740444	chr21:42740444:M	AAAAAAAAAAAAAGAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,23:37:255,0,144	0/1:11,13:25:159,0,115	0/1:10,12:23:153,0,109
+chr21	42740574	chr21:42740574:M	GATGGATGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAATGGATACATAGATGAATGGATGGAT	<15.8>,<16.8>	.	.	Motif=GATG	GT:AD:DP:PL	1/2:0,9,7:16:255,114,68,146,0,101	1/2:0,3,5:10:198,81,58,49,0,26	1/2:0,6,3:11:226,48,23,98,0,72
+chr21	42740705	chr21:42740705:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAACAGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<12.5>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:0,1:1:37,3,0	.	1/1:0,4:4:152,12,0
+chr21	42751745	chr21:42751745:M	TTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:137,17,0	1/1:0,8:9:206,24,0	1/1:0,5:6:130,15,0
+chr21	42754187	chr21:42754187:M	AAAAAAAAAAACAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,14:35:155,0,255	0/1:25,19:45:210,0,255	1/1:0,49:50:255,147,0
+chr21	42759383	chr21:42759383:M	GTGTGTGTGTGTGTGGGAGCGTGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,7:11:184,0,75	0/1:8,6:16:141,0,174	0/0:27,0:27:0,81,255
+chr21	42768125	chr21:42768125:M	AGCAGCAGCAGCAG	<4.3>	.	.	Motif=AGC	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,25:25:255,75,0	1/1:0,27:27:255,81,0
+chr21	42769549	chr21:42769549:M	CACACACAGGCACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:1,3:5:97,0,23	0/1:3,4:7:117,0,83	1/1:0,14:14:255,42,0
+chr21	42774882	chr21:42774882:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3:17:40,0,255	0/1:1,5:9:145,0,16	0/0:8,0:13:0,38,255
+chr21	42776849	chr21:42776849:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:10:111,0,80	0/0:14,0:15:0,44,255	1/1:0,15:17:255,50,0
+chr21	42780026	chr21:42780026:M	TCTCTCTCTCTCTCTCTCGCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:14,24:38:255,0,255	0/0:35,0:37:0,105,255
+chr21	42780166	chr21:42780166:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:49,1:51:0,131,255	0/0:37,1:38:0,94,255	0/1:26,13:42:123,0,255
+chr21	42780416	chr21:42780416:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/1:12,17:29:215,0,126	0/0:32,1:34:0,81,255
+chr21	42787797	chr21:42787797:M	ATTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<13.8>,<14.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,7,0:17:163,0,237,125,255,255	0/1:3,3,0:6:74,0,67,51,78,122	0/2:7,0,6:13:157,106,255,0,182,168
+chr21	42788160	chr21:42788160:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:32:83,0,255	0/1:16,16:32:188,0,188	0/0:23,3:26:0,22,255
+chr21	42788306	chr21:42788306:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:23:96,0,188	0/1:10,12:22:142,0,109	0/1:12,9:24:111,0,147
+chr21	42795971	chr21:42795971:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:6:0,4,58	0/1:2,3:7:50,0,13	0/1:4,2:6:16,0,50
+chr21	42798803	chr21:42798803:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:12:92,0,47	0/1:12,4:18:17,0,173	1/1:2,23:25:255,38,0
+chr21	42800401	chr21:42800401:M	TGGTGGTGGTGGTGGTGGTGGTGGTGGTG	<7.7>	.	.	Motif=TGG	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,31:31:255,93,0	1/1:0,35:35:255,105,0
+chr21	42809780	chr21:42809780:M	CACATGCACAGGTACACATGCACAGGCACATACATGCACA	<5.3>	.	.	Motif=CACATG	GT:AD:DP:PL	0/1:19,4:23:2,0,255	0/0:24,2:26:0,43,255	0/1:18,6:24:34,0,247
+chr21	42809815	chr21:42809815:M	GCACACACACAGGCACACACTCGCACACGCACAGGCACGCACGCACACTCACATGCACACACGCACAAGCACAC	<8.7>	.	.	Motif=GCACAC	GT:AD:DP:PL	0/1:3,14:17:255,0,31	1/1:0,18:19:255,54,0	0/1:5,11:17:255,0,74
+chr21	42811264	chr21:42811264:M	TTTTTTTTAATTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,7:13:94,0,56	0/1:4,14:19:201,0,14	0/0:16,1:18:0,35,255
+chr21	42822490	chr21:42822490:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,5:27:11,0,255	0/1:17,10:29:110,0,207	0/0:31,3:35:0,49,255
+chr21	42824262	chr21:42824262:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,2:39:0,80,255	0/1:26,19:46:172,0,255	0/0:33,1:36:0,88,255
+chr21	42824756	chr21:42824756:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,13:27:151,0,153	1/1:2,11:14:159,7,0	0/1:8,13:23:177,0,72
+chr21	42824772	chr21:42824772:M	AAAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAGAGAGAAAGAGATAGAAAAAAAAGAAAAGAGAGAGAAAGAA	<18>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:1,1:4:17,0,10	0/1:2,3:5:40,0,22	0/0:7,0:7:0,21,129
+chr21	42824865	chr21:42824865:M	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	<8.5>,<12.5>	.	.	Motif=AGGA	GT:AD:DP:PL	0/2:5,0,14:21:255,255,255,0,73,101	0/0:18,0,0:18:0,50,227,54,255,255	1/2:1,14,10:27:255,227,210,157,0,255
+chr21	42827446	chr21:42827446:M	ATAGATAGATAGATAGATAGAT	<6.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,42:42:255,124,0	1/1:0,40:42:255,118,0
+chr21	42828695	chr21:42828695:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,35:36:255,105,0	1/1:0,35:38:255,108,0
+chr21	42830326	chr21:42830326:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,18:27:233,0,77	0/1:10,9:20:100,0,107	0/0:33,1:35:0,85,255
+chr21	42831402	chr21:42831402:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,11:21:234,165,255,88,0,130	1/1:0,13,1:15:226,34,0,247,18,255	1/2:1,7,13:22:255,217,255,105,0,131
+chr21	42832171	chr21:42832171:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,14:15:255,236,233,44,26,0	0/2:2,1,5:8:72,54,100,0,17,11	1/2:1,7,12:21:255,159,162,105,0,65
+chr21	42833820	chr21:42833820:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:25:0,65,255	0/1:10,7:23:58,0,145	0/1:17,5:24:16,0,225
+chr21	42836036	chr21:42836036:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,3:48:0,86,255	0/1:16,30:50:255,0,149	0/0:37,1:38:0,94,255
+chr21	42840650	chr21:42840650:M	TGTGTGCGTATGTGGTGTGGTGTGTGTAGTGTAATGTGTGGTGTGTATGTG	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,18:26:255,0,139	0/1:13,12:25:255,0,255	0/1:12,17:29:255,0,236
+chr21	42843407	chr21:42843407:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,14	1/1:0,0:5:29,6,0	1/1:0,4:4:124,12,0
+chr21	42847038	chr21:42847038:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,43:43:255,126,0	1/1:0,49:49:255,145,0
+chr21	42848344	chr21:42848344:M	CACACACACACA	<5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:13,7:20:68,0,175	0/0:42,0:42:0,124,255
+chr21	42849095	chr21:42849095:M	CACACACACACACA	<5>,<8>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,1:8:255,20,10,255,0,255	2/2:0,0,7:7:130,151,255,21,21,0	1/1:0,7,0:7:255,21,0,255,21,255
+chr21	42852916	chr21:42852916:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:21:106,0,143	1/1:2,19:22:255,20,0	0/1:13,12:27:154,0,156
+chr21	42855128	chr21:42855128:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:14:95,0,67	0/1:6,21:28:255,0,21	0/1:13,13:30:162,0,161
+chr21	42864108	chr21:42864108:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAA	<18>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0,0:1:0,3,28,3,20,17	1/1:0,6,0:7:179,21,0,179,21,179	2/2:0,0,3:3:49,57,80,9,9,0
+chr21	42870014	chr21:42870014:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,44,255	0/1:10,11:21:127,0,111	0/0:24,0:24:0,70,255
+chr21	42871991	chr21:42871991:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:223,0,255	1/1:0,33:33:255,97,0	0/1:11,16:27:217,0,124
+chr21	42876824	chr21:42876824:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/1:18,21:39:255,0,206	0/0:44,0:44:0,130,255
+chr21	42877139	chr21:42877139:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:5:32,0,21	1/1:0,7:7:117,20,0	0/1:2,1:4:15,0,23
+chr21	42877473	chr21:42877473:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:17,1,11:30:115,170,255,0,234,236	0/1:3,17,2:25:238,0,5,255,2,255	0/0:22,2,2:26:0,40,255,40,255,255
+chr21	42878042	chr21:42878042:M	AAAAAAAAAAAAAAAGAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,2:13:0,2,152	1/1:1,14:15:221,27,0	0/1:7,5:14:47,0,100
+chr21	42880935	chr21:42880935:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:23:118,0,175	1/1:1,10:14:191,23,0	0/1:13,9:24:94,0,186
+chr21	42881399	chr21:42881399:M	GTTTGTTTGTTTGTTTGTTT	<4>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:20,18:38:215,0,252	0/0:35,0:35:0,103,255
+chr21	42883275	chr21:42883275:M	AAAAAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:13:104,0,35	1/1:0,16:16:255,47,0	0/1:10,4:15:26,0,141
+chr21	42883315	chr21:42883315:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:16:0,29,243	0/0:16,1:18:0,35,255	0/1:6,14:20:187,0,47
+chr21	42887295	chr21:42887295:M	TTTTTTTTTTTTTTTTTTTTATTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:16:0,28,229	0/1:13,5:18:32,0,167	0/1:17,4:21:8,0,233
+chr21	42892254	chr21:42892254:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,13,0:21:255,0,167,232,143,255	1/2:0,16,12:30:255,173,120,255,0,211	0/1:10,16,1:28:255,0,202,255,159,255
+chr21	42895979	chr21:42895979:M	TTTTTCTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,4:18:28,0,167	0/1:2,2:5:28,0,20	0/1:13,6:20:56,0,172
+chr21	42896152	chr21:42896152:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,0,4,0:10:87,69,222,0,163,152,69,219,160,216	1/2:0,4,1,0:5:132,17,2,67,0,53,120,14,66,115	0/3:2,0,0,6:8:147,153,207,102,156,140,0,53,53,34
+chr21	42897407	chr21:42897407:M	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<6.4>	.	.	Motif=TTTGT	GT:AD:DP:PL	0/1:12,13:25:178,0,158	1/1:0,28:28:255,82,0	0/0:33,0:33:0,97,255
+chr21	42899439	chr21:42899439:M	TTTTTTGTTTTTTTGTTTTGTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:25:138,0,197	1/1:0,33:33:255,97,0	0/1:13,16:29:215,0,159
+chr21	42904492	chr21:42904492:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,1:7:0,2,90	0/1:3,6:9:77,0,25	0/1:9,3:14:25,0,121
+chr21	42905864	chr21:42905864:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,9,0:17:206,0,174,162,143,255	1/1:0,24,1:27:255,75,0,255,59,255	0/2:14,3,12:30:165,119,255,0,185,167
+chr21	42907449	chr21:42907449:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4,1:13:91,0,171,64,110,157	1/1:1,9,0:12:254,8,0,178,24,167	0/2:9,0,7:16:78,105,255,0,158,113
+chr21	42909137	chr21:42909137:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,4:8:50,0,31	1/1:0,0:2:22,5,0	0/1:1,1:3:8,0,21
+chr21	42912892	chr21:42912892:M	AAAAAAAAAAAACAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/1:7,8:15:94,0,77	0/0:21,0:21:0,62,255
+chr21	42914286	chr21:42914286:M	AAAAAAAAAAAAAAGAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,17:23:246,0,43	1/1:1,27:29:255,68,0	0/1:14,11:26:122,0,184
+chr21	42924949	chr21:42924949:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,1,4:18:61,56,240,0,212,255	1/2:0,2,9:11:255,156,126,30,0,3	0/1:14,12,1:27:148,0,176,166,233,255
+chr21	42926241	chr21:42926241:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,17:35:216,0,236	1/1:0,29:29:255,85,0	0/1:21,12:33:123,0,255
+chr21	42928557	chr21:42928557:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAA	<39>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0,0:4:0,12,114,12,114,114	1/2:0,3,2:5:123,34,19,50,0,36	0/2:5,1,3:9:66,34,147,0,107,113
+chr21	42929186	chr21:42929186:M	TTTCTTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTTTTTC	<15>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:13,6:19:90,0,255	0/1:2,17:20:255,0,3	0/1:15,7:22:106,0,255
+chr21	42933401	chr21:42933401:M	AAAGAGAGAAGAAAAAGAGAAAGAGA	<4.5>	.	.	Motif=AAAGAG	GT:AD:DP:PL	0/1:21,19:40:255,0,255	1/1:0,32:32:255,96,0	0/1:24,21:45:255,0,255
+chr21	42933679	chr21:42933679:M	AAAAAAAAGTAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:9:25,0,76	.	0/0:14,2:17:0,7,191
+chr21	42939258	chr21:42939258:M	TTTTTTGTTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:4:80,11,0	1/1:0,2:3:71,9,0	1/1:0,4:5:129,15,0
+chr21	42948050	chr21:42948050:M	TTTTTTTTTTTTTT	<11>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:25,0,22:49:255,255,255,0,255,255	0/2:19,0,20:41:242,255,255,0,255,225	1/2:1,18,14:37:255,250,255,255,0,255
+chr21	42956741	chr21:42956741:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,6:10:74,0,33	1/1:1,14:17:235,33,0	1/1:1,4:8:74,4,0
+chr21	42958065	chr21:42958065:M	GAGAGAGAGAGAGA	<8>	.	.	Motif=GA	GT:AD:DP:PL	0/1:9,12:21:170,0,110	0/1:13,14:27:172,0,156	0/0:24,0:24:0,71,255
+chr21	42958896	chr21:42958896:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:26:250,0,255	0/1:6,4:14:72,0,139	0/0:30,0:32:0,95,255
+chr21	42959404	chr21:42959404:M	ATTATTATTATTATTATTATTATTCTTATT	<9.7>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:9,8:26:20,2,0	0/1:15,9:33:14,0,9	0/0:22,5:35:0,5,37
+chr21	42960020	chr21:42960020:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:34:255,96,0	1/1:0,24:27:255,78,0	1/1:2,31:37:255,70,0
+chr21	42962840	chr21:42962840:M	TTTTCTTTTCTTTTCTTTTCT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:7,6:13:76,0,95	0/1:9,6:15:63,0,118	0/0:19,0:19:0,56,255
+chr21	42966421	chr21:42966421:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:23:145,0,135	0/1:12,3:15:8,0,165	1/1:1,23:24:255,53,0
+chr21	42966775	chr21:42966775:M	TTTTTTTTTTTTTTTTTT	<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,3:11:187,36,65,143,0,151	0/1:2,11,2:17:255,0,30,255,0,255	2/2:1,0,10:13:163,196,255,11,35,0
+chr21	42969908	chr21:42969908:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:24:255,46,0	1/1:0,13:13:223,38,0	1/1:1,20:22:255,46,0
+chr21	42975046	chr21:42975046:M	GCGGGGCGGGG	<3.4>	.	.	Motif=GCGGG	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,12:12:255,36,0	1/1:0,16:16:255,48,0
+chr21	42977538	chr21:42977538:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:81,9,0	1/1:0,3:5:84,5,0	1/1:0,1:1:27,3,0
+chr21	42978469	chr21:42978469:M	TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:17:130,0,195	0/1:4,2:8:31,0,108	0/1:7,4:14:97,0,153
+chr21	42982732	chr21:42982732:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,5:19:255,88,34,210,0,195	1/2:1,15,5:21:255,67,24,195,0,206	1/2:2,6,5:14:182,59,57,53,0,86
+chr21	42984066	chr21:42984066:M	GTGTGTGCGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,23:24:255,71,0	1/1:0,23:23:255,69,0	1/1:0,27:27:255,81,0
+chr21	42984965	chr21:42984965:M	TTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:60,11,0	.	1/1:0,0:1:10,3,0
+chr21	42986003	chr21:42986003:M	AAAAAAAAAAAAAAATTAAAAAAAAAA	<29>,<30>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,9,7:16:255,126,80,161,0,117	1/2:0,14,7:21:255,120,59,239,0,180	1/1:0,10,0:11:255,30,0,207,32,189
+chr21	42987383	chr21:42987383:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:65,8,0	.	1/1:0,3:7:121,5,0
+chr21	42987405	chr21:42987405:M	ATATATATATATATATATATATATGTATA	<13>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,4:12:86,0,104	0/0:8,0:9:0,26,213	0/1:7,3:12:50,0,156
+chr21	42987619	chr21:42987619:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:17:233,13,0	1/1:0,8:9:141,24,0	0/1:7,3:10:25,0,97
+chr21	42988049	chr21:42988049:M	TTTTTGTTTTTGTTTTTGTTTTTG	<3.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	1/1:0,9:9:232,27,0	1/1:0,11:11:255,33,0	1/1:0,2:2:52,6,0
+chr21	42990097	chr21:42990097:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:4,23:28:255,12,0	1/1:2,28:30:255,52,0
+chr21	42991734	chr21:42991734:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:1,21:22:255,47,0	1/1:1,32:36:255,87,0
+chr21	42993651	chr21:42993651:M	TTTTTTTTGTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,6:10:255,109,80,73,0,44	1/2:0,6,7:14:255,121,81,115,0,76	1/2:0,14,1:21:255,70,20,255,0,201
+chr21	42993726	chr21:42993726:M	TTTTTTTTTCTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,10:28:255,182,102,255,0,233	1/2:0,10,5:17:255,87,37,200,0,154	1/2:0,10,6:19:255,108,53,216,0,166
+chr21	42994032	chr21:42994032:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:1,1,0	0/1:1,2:6:59,0,17	1/1:0,3:3:86,9,0
+chr21	42994892	chr21:42994892:M	TTTCTTTTCTTTTCTTTTTCTTTCTTCTTTTTTTTTTTTTTTTTTTT	<7.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	1/1:0,4:7:94,6,0	0/1:1,2:5:39,0,24	0/1:1,2:4:41,0,18
+chr21	42996892	chr21:42996892:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20:22:255,27,0	1/1:2,30:33:255,52,0	0/1:23,21:44:254,0,255
+chr21	42999475	chr21:42999475:M	TTTTCTTTTCTTTTTTTTTCTTTT	<3.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:10,0:10:0,30,193	0/0:14,0:14:0,41,253	1/1:0,22:22:255,65,0
+chr21	43001961	chr21:43001961:M	AAATAAATAAATAAATAAATAAATAAA	<6.2>,<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:1,4,34:53:255,255,255,92,0,37	1/2:1,9,17:36:255,144,255,173,0,181	1/2:0,4,26:40:255,235,255,126,0,84
+chr21	43005535	chr21:43005535:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,26:28:255,63,0	1/1:1,37:41:255,102,0	0/1:16,20:36:255,0,188
+chr21	43008062	chr21:43008062:M	CACACACACACACACACACACACACACACACACACA	<16>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,27,0:28:255,81,0,255,84,255	1/1:0,16,0:24:255,51,0,255,41,255	1/2:0,14,11:28:255,255,255,255,0,255
+chr21	43009611	chr21:43009611:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:35,6,0	0/1:1,3:6:44,0,11	0/1:0,1:3:12,0,5
+chr21	43011067	chr21:43011067:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:7:79,2,0	1/1:1,4:6:62,0,0	1/1:0,11:12:204,35,0
+chr21	43019085	chr21:43019085:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:25:144,0,146	0/1:7,11:18:137,0,68	0/1:6,9:16:116,0,62
+chr21	43019926	chr21:43019926:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,2:5:138,36,21,54,0,39	1/2:0,3,0:6:86,0,7,55,0,46	2/2:0,0,5:6:154,88,71,17,1,0
+chr21	43023630	chr21:43023630:M	TTTTTTTTTTTTATTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14:30:187,0,177	0/1:15,18:33:224,0,171	0/1:13,19:32:255,0,146
+chr21	43028450	chr21:43028450:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,16:32:255,255,255,255,0,255	1/2:1,13,26:40:255,255,255,213,0,255	1/2:4,23,21:48:255,255,255,255,0,255
+chr21	43029396	chr21:43029396:M	TTTTTATTTTTTTTTATTTGTTTGCTTTGTTTTTTTTTTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:10:193,26,0	1/1:0,3:5:105,14,0	1/1:0,10:12:255,36,0
+chr21	43030261	chr21:43030261:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTG	<17.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,8,9:17:255,235,211,211,0,184	1/2:0,12,11:23:255,255,253,255,0,255	1/2:0,18,16:36:255,255,255,255,0,255
+chr21	43034832	chr21:43034832:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:30:220,0,138	0/1:26,11:37:84,0,255	0/1:24,22:46:255,0,255
+chr21	43035876	chr21:43035876:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAA	<15.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,3:5:91,9,0	1/1:0,2:3:62,6,0	1/1:0,0:2:11,3,0
+chr21	43052881	chr21:43052881:M	AAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:12:206,0,37	0/1:2,4:8:108,0,46	0/0:0,0:1:0,0,1
+chr21	43053773	chr21:43053773:M	GCCAGGCCAGGC	<1.4>	.	.	Motif=GCCAG	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:19,0:19:0,56,255	0/1:11,7:18:79,0,154
+chr21	43061241	chr21:43061241:M	TTTTCTTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:19:168,0,74	0/1:3,6:11:74,0,42	0/0:18,0:18:0,53,255
+chr21	43061415	chr21:43061415:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:8:0,23,128	0/1:1,1:3:9,0,19	0/1:10,4:14:30,0,137
+chr21	43151297	chr21:43151297:M	CATCCATCCATCCATCCATCCATCCATCCATCCATCCAT	<10.8>	.	.	Motif=CATC	GT:AD:DP:PL	0/0:19,0:19:0,56,255	1/1:0,10:10:183,29,0	0/1:19,13:32:152,0,255
+chr21	43153264	chr21:43153264:M	TTTTTCGTTTTTGTTTTTGTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:4,3:8:33,0,52	0/0:5,0:5:0,15,91	0/1:3,1:4:6,0,43
+chr21	43164478	chr21:43164478:M	TTTTTTTTTTTTTTCTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,14,84	0/0:21,2:25:0,38,255	0/1:1,8:11:112,0,7
+chr21	43167835	chr21:43167835:M	AATAATAATAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:14,0:14:0,42,255	0/0:15,0:15:0,45,255	0/1:7,9:16:214,0,148
+chr21	43179973	chr21:43179973:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:9,5:14:51,0,122	0/0:19,0:19:0,56,255
+chr21	43180141	chr21:43180141:M	TGTGTGTGTGTGTGTGGGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:7,0:7:0,21,134	0/0:16,0:16:0,47,255	1/1:0,3:3:56,9,0
+chr21	43184262	chr21:43184262:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:14:51,0,124	0/0:15,0:15:0,44,255	1/1:0,21:21:255,62,0
+chr21	43189691	chr21:43189691:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,35:38:255,76,0	1/1:1,24:25:255,56,0	0/1:16,15:32:171,0,188
+chr21	43190666	chr21:43190666:M	TTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,21:34:255,255,255,218,0,255	2/2:0,0,24:27:255,255,255,80,75,0	1/1:1,40,0:41:255,103,0,255,123,255
+chr21	43196331	chr21:43196331:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:2,31:34:255,53,0	0/1:21,27:49:255,0,240
+chr21	43198012	chr21:43198012:M	AAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:143,0,182	0/0:30,1:32:0,76,255	0/1:16,11:27:118,0,209
+chr21	43294100	chr21:43294100:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,14:23:255,255,191,165,0,99	0/2:13,1,10:25:243,164,255,0,255,255	1/1:0,32,0:33:255,96,0,255,97,255
+chr21	43298612	chr21:43298612:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,35:36:255,87,0	0/1:24,18:42:203,0,255	1/1:0,35:35:255,103,0
+chr21	43351329	chr21:43351329:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>,<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,12,0,0:29:255,217,131,255,0,217,255,182,255,255,255,216,255,255,255	1/3:0,13,1,13,0:27:255,255,255,255,205,255,255,0,205,255,255,223,255,255,255	2/4:0,1,11,0,8:20:255,255,255,230,211,187,255,255,139,255,255,174,0,203,255
+chr21	43357368	chr21:43357368:M	AATAATAATAATAATAATAATAATAATAATAATAATAATAA	<10.7>,<16.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:11,17,0:28:255,0,240,255,255,255	1/1:0,22,0:22:255,66,0,255,66,255	0/2:11,0,9:20:214,247,255,0,255,255
+chr21	43360515	chr21:43360515:M	GTGTGTGTGTGTG	<5.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,11:22:157,0,129	1/1:0,30:30:255,88,0	0/0:33,0:33:0,97,255
+chr21	43368635	chr21:43368635:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,22:45:255,0,255	0/1:21,19:40:220,0,255	0/0:49,0:49:0,144,255
+chr21	43369104	chr21:43369104:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,25:47:255,0,255	0/1:14,13:27:154,0,171	0/0:43,3:47:0,83,255
+chr21	43377297	chr21:43377297:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:75,14,0	0/0:11,0:12:0,35,184	1/1:3,16:20:222,9,0
+chr21	43405254	chr21:43405254:M	TATATATATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:5,0:5:0,15,81	1/1:0,7:9:121,23,0	0/0:23,1:25:0,56,255
+chr21	43440284	chr21:43440284:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>	.	.	Motif=TG	GT:AD:DP:PL	.	1/1:0,4:4:111,12,0	.
+chr21	43465111	chr21:43465111:M	GGGGGGGGGTGGGGGGG	<16>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:57,9,0	0/1:1,2:3:27,0,9	1/1:0,10:10:184,29,0
+chr21	43468205	chr21:43468205:M	ACACACCACACACCACACACCCCACATACCTCCCACACACACCATACACACACAC	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,12:17:100,0,88	0/1:4,8:12:63,0,75	1/1:1,11:12:108,6,0
+chr21	43468430	chr21:43468430:M	CACACAACCACATACACTACACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:7,12:19:90,0,135	0/1:8,8:16:49,0,170	0/1:6,11:17:83,0,114
+chr21	43468503	chr21:43468503:M	CACACACACCACACACCTCACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:4,12:16:99,0,64	0/1:7,8:15:52,0,147	0/1:2,11:13:95,0,18
+chr21	43468575	chr21:43468575:M	TGTGTGTGTGTGTGGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,25:43:177,0,255	0/1:17,11:28:51,0,255	0/1:21,11:32:38,0,255
+chr21	43468662	chr21:43468662:M	GTGTGTGGTGTGTATATGTGTGTGGGGTATGTGTGTGTGTGGTGTGTGCGTGT	<67.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:3,25:28:207,0,1	0/1:3,11:14:86,0,49	0/1:4,11:15:83,0,64
+chr21	43497651	chr21:43497651:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,9:13:129,0,37	0/1:5,8:13:103,0,50	0/1:10,11:21:139,0,121
+chr21	43518130	chr21:43518130:M	CACAGTCACACACAAAGACACACACACACACACACACACACACACACACACACACAGAGACAGACACAGA	<1.7>	.	.	Motif=CACAGA	GT:AD:DP:PL	0/1:2,2:5:44,0,48	0/1:1,1:4:18,0,36	0/1:1,3:6:71,0,23
+chr21	43533147	chr21:43533147:M	AAACAAACAAACAAACAAACAAACAAACAAACAAA	<7.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:6,3:9:31,0,90	0/1:8,8:17:98,0,98	0/1:8,10:18:135,0,97
+chr21	43542110	chr21:43542110:M	AAAAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,4:8:211,72,101,125,0,107	0/1:4,7,1:14:254,0,107,189,45,227	1/2:0,9,3:13:255,56,71,255,0,238
+chr21	43548107	chr21:43548107:M	AAAAAAAAACAACAACAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:17:160,0,62	0/1:3,5:9:64,0,36	0/1:7,6:14:76,0,87
+chr21	43554760	chr21:43554760:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4,1:9:99,0,62,53,63,127	0/1:9,2,0:12:17,0,222,32,233,255	0/2:4,1,3:8:70,33,121,0,84,91
+chr21	43558011	chr21:43558011:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,9:14:124,0,50	0/1:9,10:20:126,0,97	0/1:6,7:14:85,0,76
+chr21	43576119	chr21:43576119:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,11:12:202,176,173,35,18,0	1/2:0,3,8:13:201,109,95,66,0,34	1/2:1,5,8:14:215,96,106,67,0,44
+chr21	43587666	chr21:43587666:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:9:16,0,64	0/1:4,3:8:27,0,55	0/1:6,3:11:31,0,81
+chr21	43596887	chr21:43596887:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:12:126,0,98	0/1:5,7:18:142,0,125	0/1:4,6:10:123,0,78
+chr21	43598382	chr21:43598382:M	TTTTTTTGTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,16:25:255,0,129	0/1:8,4:14:67,0,195	0/1:12,15:31:255,0,239
+chr21	43599868	chr21:43599868:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,7:27:69,0,241	0/1:11,3:17:2,0,174	0/1:10,7:17:75,0,128
+chr21	43610436	chr21:43610436:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,28:31:255,55,0	0/1:2,8:13:100,0,34	1/1:1,15:17:247,29,0
+chr21	43616042	chr21:43616042:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:35:183,0,123	0/1:13,13:32:102,0,133	0/1:21,2:30:33,0,221
+chr21	43616053	chr21:43616053:M	ATATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/0:35,0:38:0,111,255	0/1:17,10:28:170,0,255	0/1:17,9:31:130,0,255
+chr21	43616931	chr21:43616931:M	AAAAAAAAAAGAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:30,18:50:255,0,255	0/1:18,21:40:255,0,255	0/1:23,15:40:232,0,255
+chr21	43622971	chr21:43622971:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,21:39:255,0,202	0/1:23,22:45:254,0,255	0/1:15,22:37:255,0,164
+chr21	43626868	chr21:43626868:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,20:43:254,0,255	0/1:10,21:34:255,0,77	0/1:13,26:39:255,0,121
+chr21	43631984	chr21:43631984:M	CACACACACACTCCCACACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:7,1:8:0,7,93	0/1:5,3:8:22,0,52	0/1:5,2:7:10,0,56
+chr21	43632872	chr21:43632872:M	TATGTATGTGTGTGTGTGTGTATGTAT	<7.2>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:25,14:47:99,0,170	0/1:24,15:46:93,0,168	0/1:18,10:37:83,0,116
+chr21	43635929	chr21:43635929:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:9:54,0,44	0/1:3,7:10:88,0,21	0/1:6,5:12:51,0,78
+chr21	43636192	chr21:43636192:M	AAAGAAAAAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA	<14.2>	.	.	Motif=AAAGA	GT:AD:DP:PL	1/1:0,1:1:27,3,0	0/1:6,6:13:123,0,122	0/0:13,0:13:0,39,255
+chr21	43636890	chr21:43636890:M	AAAACAAAAAAAAAAAAAAAAAAAAGAAATAAAGAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:133,15,0	0/1:2,3:5:65,0,36	0/1:1,5:8:120,0,6
+chr21	43637487	chr21:43637487:M	AAATAAATAAATAAATAAATAAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:12,21:33:255,0,135	0/1:11,12:23:151,0,132	0/1:18,12:30:138,0,250
+chr21	43637808	chr21:43637808:M	AAAAAAAAAAAAGAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7:20:71,0,183	0/1:21,17:38:188,0,255	0/1:16,14:32:179,0,198
+chr21	43641916	chr21:43641916:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:12:28,0,100	0/1:3,5:8:61,0,27	0/1:6,4:10:40,0,75
+chr21	43642791	chr21:43642791:M	TTTTCTTTTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:9:140,35,72,98,0,104	0/1:2,3,2:9:76,0,58,54,0,75	1/2:1,7,3:12:215,43,75,166,0,169
+chr21	43652401	chr21:43652401:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:10:85,0,23	0/1:3,4:9:55,0,26	0/1:3,2:6:26,0,34
+chr21	43653182	chr21:43653182:M	AAGGGAAAGGAAGGGAAGGGGAAGGGAAGGGAAGGGGAAGGGAAGGGAAGGGGAAGGGAAGGGGAGGGGAGGGGAGGGAAGGGAAGGGA	<14.6>	.	.	Motif=AAGGG	GT:AD:DP:PL	1/1:0,3:3:76,9,0	1/1:0,3:3:74,9,0	1/1:0,3:6:74,9,0
+chr21	43664328	chr21:43664328:M	AAAAAAAAAAAAAAAAAGAAAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:18:142,0,72	0/1:8,4:13:39,0,97	0/1:11,10:22:122,0,127
+chr21	43666717	chr21:43666717:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:14:84,0,67	0/1:5,6:13:76,0,51	0/1:10,8:19:95,0,120
+chr21	43667042	chr21:43667042:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,19:46:227,0,255	0/1:16,22:38:255,0,175	0/1:16,21:37:255,0,187
+chr21	43675844	chr21:43675844:M	ATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<13>	.	.	Motif=ATTTT	GT:AD:DP:PL	0/1:15,12:27:251,0,255	0/1:7,9:16:199,0,146	0/0:17,0:17:0,51,255
+chr21	43680404	chr21:43680404:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,15:31:196,0,203	0/1:12,16:29:212,0,129	0/1:22,16:38:185,0,255
+chr21	43681262	chr21:43681262:M	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<8.8>,<9.8>	.	.	Motif=AGAT	GT:AD:DP:PL	0/2:19,0,10:29:105,162,255,0,255,255	0/1:14,18,0:32:255,0,255,255,246,255	0/2:20,1,15:36:183,217,255,0,255,255
+chr21	43683973	chr21:43683973:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:10:9,0,97	0/0:7,1:8:0,7,100	0/1:5,4:9:42,0,60
+chr21	43691632	chr21:43691632:M	TTTTTATTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:17:132,0,70	0/1:4,5:9:60,0,43	0/1:3,8:12:117,0,19
+chr21	43695170	chr21:43695170:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:234,0,216	0/1:21,18:40:210,0,255	0/1:20,17:40:215,0,252
+chr21	43696984	chr21:43696984:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,39:39:255,115,0	1/1:0,42:43:255,126,0
+chr21	43704221	chr21:43704221:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:5:3,0,55	1/1:0,3:3:50,9,0	0/0:3,0:4:0,9,51
+chr21	43704960	chr21:43704960:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:28:226,0,255	0/1:20,11:34:230,0,255	0/1:18,6:25:101,0,255
+chr21	43705728	chr21:43705728:M	AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA	<36>,<41>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,3:10:130,60,60,69,0,121	1/2:0,2,2:6:85,58,53,31,0,35	1/2:0,6,7:15:255,178,160,103,0,131
+chr21	43706260	chr21:43706260:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:160,0,179	0/1:10,15:26:195,0,99	0/1:15,10:26:113,0,195
+chr21	43706593	chr21:43706593:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:13:82,0,53	0/1:1,3:5:48,0,2	0/1:6,4:10:39,0,74
+chr21	43706951	chr21:43706951:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:15:29,0,146	0/1:6,6:12:68,0,68	0/1:5,12:18:168,0,37
+chr21	43712199	chr21:43712199:M	AAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:12:125,0,9	1/1:1,5:6:68,1,0	0/1:5,14:20:194,0,28
+chr21	43713250	chr21:43713250:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:14:32,0,119	0/0:9,2:13:0,3,139	0/1:5,6:11:73,0,56
+chr21	43713398	chr21:43713398:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:7:67,0,9	0/1:4,1:7:2,0,53	0/1:3,1:8:0,0,58
+chr21	43724682	chr21:43724682:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:28:0,82,255	0/1:16,12:28:130,0,200	0/0:20,1:22:0,46,255
+chr21	43724841	chr21:43724841:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:16,9:32:183,0,255	0/0:33,0:36:0,102,255
+chr21	43726258	chr21:43726258:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:4:6,0,40	0/1:6,3:10:31,0,70	0/0:7,0:7:0,20,119
+chr21	43730103	chr21:43730103:M	TGATTGATTGATTGATTGATTGATTGATT	<5.2>	.	.	Motif=TGAT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:35,0:35:0,105,255	0/1:18,13:31:255,0,255
+chr21	43733238	chr21:43733238:M	CCCCTCCCCATCCCCACCCC	<2>	.	.	Motif=CCCCAT	GT:AD:DP:PL	0/1:2,6:11:134,0,30	0/1:7,2:14:59,0,149	0/1:2,3:5:61,0,37
+chr21	43736630	chr21:43736630:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0,0:7:0,21,201,21,144,125	0/2:7,0,3:12:16,43,242,0,137,109	0/1:6,3,0:10:60,0,156,51,112,140
+chr21	43738925	chr21:43738925:M	TTTTCTTTTTCTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,29,184	0/0:8,0:9:0,24,140	0/1:7,4:13:36,0,101
+chr21	43750953	chr21:43750953:M	TGTGTGTGCATGTGTGTGTGTGTGTGTG	<13>,<15>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,17,0,11:28:255,255,255,255,255,255,255,0,255,255	1/2:1,11,17,0:29:255,255,255,170,0,255,255,255,255,255	0/3:21,0,0,15:37:255,255,255,255,255,255,0,255,255,255
+chr21	43752102	chr21:43752102:M	TGTGTGTGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,19:31:250,0,124	0/0:39,0:39:0,114,255	0/1:21,13:35:136,0,255
+chr21	43757976	chr21:43757976:M	TTTTCTTTTTCTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,9:31:71,0,255	0/1:12,4:18:17,0,171	0/0:28,3:31:0,38,255
+chr21	43763884	chr21:43763884:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:12:92,0,39	0/1:6,12:20:163,0,44	0/1:7,12:19:152,0,66
+chr21	43766212	chr21:43766212:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:18:84,0,118	0/0:22,2:25:0,39,255	0/1:11,11:26:155,0,119
+chr21	43770107	chr21:43770107:M	AAAAACAAACAAACAAAAAAACAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,81,0	0/1:9,17:26:255,0,169	0/1:13,15:28:255,0,255
+chr21	43772172	chr21:43772172:M	AGAGAGAGAGAGAGA	<9.5>,<10.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:25,15,0:42:245,0,255,197,255,255	0/1:10,14,0:24:255,0,169,174,225,255	0/2:25,1,16:42:255,192,255,0,255,255
+chr21	43776445	chr21:43776445:M	GCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGG	<4.6>	.	.	Motif=GCGGG	GT:AD:DP:PL	0/1:16,9:25:169,0,255	0/1:5,13:19:255,0,81	0/0:14,0:14:0,42,255
+chr21	43776956	chr21:43776956:M	TTTCTTTTCTTTCTTTCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	<8.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,1:1:24,3,0	1/1:0,5:5:127,15,0	.
+chr21	43777289	chr21:43777289:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:15:99,0,74	0/1:4,4:8:45,0,45	0/0:7,0:8:0,23,132
+chr21	43781099	chr21:43781099:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:30:0,67,255	0/0:26,2:28:0,47,255	0/1:22,19:42:222,0,255
+chr21	43782527	chr21:43782527:M	AAACAAACAAACAAACAAACAAACAAACAAA	<8.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:14,16:30:221,0,182	0/1:13,11:24:129,0,166	0/1:19,12:31:133,0,255
+chr21	43785069	chr21:43785069:M	TGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,14:24:255,0,139	0/1:5,7:12:124,0,78	0/0:8,0:10:0,27,198
+chr21	43785978	chr21:43785978:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:164,0,202	0/1:13,19:33:243,0,144	0/1:13,9:22:102,0,175
+chr21	43788806	chr21:43788806:M	TTGTTGTTGTT	<2.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:18,0:18:0,53,255	0/1:21,18:39:225,0,255
+chr21	43805277	chr21:43805277:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:18:146,0,74	0/1:6,11:19:142,0,58	0/0:16,2:18:0,18,248
+chr21	43818195	chr21:43818195:M	TTTTTTGTTTTTGTTTTTGTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:29:166,0,150	0/1:7,13:20:150,0,54	0/1:10,22:33:255,0,78
+chr21	43820846	chr21:43820846:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:144,0,90	0/1:10,11:21:128,0,111	0/1:8,8:18:103,0,93
+chr21	43821502	chr21:43821502:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,8:29:60,0,255	0/1:9,7:20:82,0,116	0/0:13,1:14:0,23,211
+chr21	43821542	chr21:43821542:M	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCACGGTCTCCCTCTC	<7.5>	.	.	Motif=CCTCTC	GT:AD:DP:PL	1/1:0,2:6:70,9,0	0/1:0,1:7:36,0,8	1/1:0,4:5:130,15,0
+chr21	43823565	chr21:43823565:M	AAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,8:14:189,139,255,0,160,134	0/2:5,0,7:13:166,119,243,0,133,107	1/2:1,13,2:20:255,10,23,189,0,171
+chr21	43827368	chr21:43827368:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/0:35,2:38:0,76,255	0/1:19,8:27:69,0,255
+chr21	43827517	chr21:43827517:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:17:236,28,0	0/1:7,9:18:117,0,71	1/1:0,15:16:255,47,0
+chr21	43828954	chr21:43828954:M	CCCCCCCCCACCCCCA	<2.3>,<2.5>	.	.	Motif=CCCCAC	GT:AD:DP:PL	1/2:0,19,18:37:255,255,255,255,0,255	0/2:20,0,17:37:255,255,255,0,255,255	0/1:18,19,0:37:255,0,255,255,255,255
+chr21	43836582	chr21:43836582:M	AAACAAACAAACAAACAAACAAACAAAAAAAC	<7>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,31:31:255,91,0	0/1:15,23:38:255,0,170
+chr21	43838471	chr21:43838471:M	CAAAAAAAAACCAAACCAAACCAAACCAAAACAAAA	<6.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,27:27:255,79,0	0/1:15,13:29:158,0,197
+chr21	43840553	chr21:43840553:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:21:130,0,114	0/1:12,10:25:111,0,155	0/0:32,1:35:0,84,255
+chr21	43841445	chr21:43841445:M	TATTTATTTATTTATTTATTTATTTATATATTT	<7.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,18:34:246,0,208	0/1:14,9:23:95,0,186	0/0:28,0:28:0,83,255
+chr21	43841956	chr21:43841956:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,2:17:0,15,216	0/1:21,4:26:7,0,255	0/1:14,15:31:182,0,146
+chr21	43842687	chr21:43842687:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,7:20:72,0,101	0/1:12,17:30:168,0,84	0/0:32,2:40:0,10,255
+chr21	43843376	chr21:43843376:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:33,0,144	0/0:10,2:13:0,3,148	0/0:29,0:30:0,88,255
+chr21	43843987	chr21:43843987:M	TTTTTTTTTTTTTTTCTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:148,0,92	0/1:12,13:27:168,0,132	1/1:2,32:34:255,64,0
+chr21	43844676	chr21:43844676:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:26,1,18:46:214,255,255,0,255,255	1/2:0,24,12:37:255,208,233,255,0,255	0/0:32,2,0:34:0,64,255,100,255,255
+chr21	43846409	chr21:43846409:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,16:18:253,17,0	1/1:2,12:14:172,7,0	0/1:11,6:19:61,0,149
+chr21	43848256	chr21:43848256:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9>,<12>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:9,0,6:15:130,158,255,0,172,221	1/2:0,12,4:16:255,105,71,216,0,255	0/0:16,0,0:16:0,47,255,48,255,255
+chr21	43855411	chr21:43855411:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:116,0,153	0/1:8,5:17:37,0,127	0/0:32,1:36:0,87,255
+chr21	43856394	chr21:43856394:M	ATATATATATATATATATATATATATATATAT	<11.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:0,3,6:15:120,47,113,0,22,49	1/1:0,3,0:5:108,11,0,82,12,74	0/0:0,0,0:3:0,6,27,6,27,27
+chr21	43857286	chr21:43857286:M	AACAACAACAACAACAACAACAA	<5.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:21,16:38:255,0,255	0/1:17,10:27:190,0,255	0/0:32,0:34:0,102,255
+chr21	43857602	chr21:43857602:M	AAACAAACAAA	<1.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:16,18:34:251,0,210	0/1:31,25:56:255,0,255	0/1:13,23:36:255,0,139
+chr21	43857902	chr21:43857902:M	AAACAAACAAACAAGCAAAAAAAAAAACCAAACAAA	<9.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:14,10:25:141,0,235	0/1:10,7:17:100,0,166	0/0:16,0:16:0,48,255
+chr21	43858537	chr21:43858537:M	TTTGTTTGTTTGTTTTTTG	<5.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,48:48:255,141,0	0/1:24,22:46:255,0,255
+chr21	43861489	chr21:43861489:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:20:119,0,110	0/1:7,11:19:130,0,72	0/1:14,10:24:102,0,172
+chr21	43862723	chr21:43862723:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,62,0	0/1:3,9:15:114,0,14	0/1:11,12:23:136,0,119
+chr21	43864121	chr21:43864121:M	AAAAATAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,16,15:31:255,216,255,231,0,255	1/2:0,18,7:27:255,98,107,255,0,255	0/2:13,0,13:27:116,189,255,0,155,116
+chr21	43866121	chr21:43866121:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:25:170,0,253	0/1:11,7:21:125,0,254	1/1:0,13:15:255,39,0
+chr21	43866200	chr21:43866200:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,11:31:114,0,255	0/1:10,13:25:166,0,114	0/0:46,1:47:0,120,255
+chr21	43888399	chr21:43888399:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,41:41:255,121,0	1/1:0,51:51:255,151,0
+chr21	43889287	chr21:43889287:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,17:41:192,0,255	0/1:19,13:33:128,0,242	0/0:25,2:29:0,49,255
+chr21	43890716	chr21:43890716:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:35:255,83,0	1/1:2,30:35:255,66,0	1/1:1,40:42:255,105,0
+chr21	43894218	chr21:43894218:M	TTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14:30:255,0,255	0/1:14,5:24:65,0,255	0/0:24,0:25:0,65,255
+chr21	43895510	chr21:43895510:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,9:12:214,137,128,54,0,19	1/2:1,5,22:30:255,255,255,66,0,12	2/2:2,2,17:21:255,242,255,25,26,0
+chr21	43898886	chr21:43898886:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,25:56:255,0,255	0/1:23,26:49:255,0,255	1/1:0,48:49:255,145,0
+chr21	43901321	chr21:43901321:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15,1:20:255,56,0,255,40,255	1/1:0,11,1:12:255,33,0,205,18,172	1/2:0,13,5:18:255,74,35,227,0,177
+chr21	43904056	chr21:43904056:M	GTGTGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,5:16:255,77,44,197,0,154	1/2:0,13,12:26:255,173,131,230,0,160	2/2:0,2,16:18:255,255,249,52,17,0
+chr21	43905156	chr21:43905156:M	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,7:7:128,21,0	1/1:0,15:17:255,46,0
+chr21	43909293	chr21:43909293:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:56,0,3	0/1:2,2:4:22,0,22	0/1:1,3:4:40,0,6
+chr21	43917922	chr21:43917922:M	GGGTGTGGGTGT	<1.5>	.	.	Motif=GGGTGT	GT:AD:DP:PL	0/1:8,3:11:48,0,183	0/0:9,0:9:0,27,248	1/1:0,2:2:54,6,0
+chr21	43918589	chr21:43918589:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,26:28:255,46,0	0/1:9,11:21:129,0,104	1/1:0,30:30:255,88,0
+chr21	43920208	chr21:43920208:M	TGTGTGTGTGTGTGTGAGAGATTGTGAGTGAGTGTGTGTGTGT	<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:16,13:29:255,0,255	1/1:0,29:29:255,87,0
+chr21	43924181	chr21:43924181:M	TTTTTTTGTATTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:16:255,47,0	0/1:4,5:13:82,0,35	1/1:0,11:11:200,32,0
+chr21	43926637	chr21:43926637:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2,0:2:58,6,0,40,6,34	0/2:1,0,3:4:77,49,67,0,27,18	1/1:0,6,0:8:197,24,0,141,23,124
+chr21	43931923	chr21:43931923:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,9:22:255,255,236,255,0,241	0/1:9,12,0:22:255,0,214,255,249,255	2/2:0,0,29:29:255,255,255,87,87,0
+chr21	43938086	chr21:43938086:M	TCTCTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,21:39:225,0,125	0/0:38,0:38:0,108,255	1/1:0,34:34:255,97,0
+chr21	43938105	chr21:43938105:M	CACACACACACAGACACACACACACACACACACACACTCACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,10:25:66,0,105	0/1:13,12:30:76,0,110	0/0:18,1:21:0,45,227
+chr21	43938317	chr21:43938317:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:131,15,0	0/0:1,0:2:0,3,29	1/1:0,2:4:70,9,0
+chr21	43947679	chr21:43947679:M	TTTCTTTTCTTTTCTTTTTTTTTTTT	<5.4>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:11,10:21:144,0,166	0/1:14,8:24:100,0,226	0/0:23,1:24:0,51,255
+chr21	43955900	chr21:43955900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:12,10:23:114,0,138	0/0:31,1:35:0,82,255
+chr21	43965781	chr21:43965781:M	TTTTTATTTTTA	<1.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/0:49,0:49:0,147,255	0/1:23,11:34:186,0,255	0/0:40,0:40:0,120,255
+chr21	43972148	chr21:43972148:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,13:33:169,0,247	0/1:22,17:39:191,0,255	0/0:46,0:48:0,141,255
+chr21	43975986	chr21:43975986:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,9:34:192,0,255	0/1:17,16:40:255,0,255	0/0:43,0:45:0,132,255
+chr21	43980276	chr21:43980276:M	AAAAAAAAAAAAAAAACAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:105,18,0	0/0:5,0:6:0,17,94	0/1:8,3:12:17,0,110
+chr21	43984790	chr21:43984790:M	TCTTTTTTTTTTCTTTTTC	<3.3>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/1:11,16:27:255,0,173	0/1:14,16:31:255,0,235	0/0:38,0:39:0,115,255
+chr21	43989772	chr21:43989772:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,5,2:9:150,13,21,81,0,76	1/2:0,2,5:7:124,71,65,34,0,14	1/2:1,1,4:6:65,42,64,0,0,0
+chr21	43995336	chr21:43995336:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,8:16:105,0,79	0/1:3,5:8:61,0,28	0/0:21,0:22:0,64,255
+chr21	43998688	chr21:43998688:M	ATATAAATAAATATATATGTATTATATATATATATATAT	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/0:20,3:27:0,13,95	0/0:12,0:14:0,26,83	0/1:6,3:12:13,0,16
+chr21	44006674	chr21:44006674:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:27:0,60,255	0/0:32,0:36:0,105,255	0/1:17,8:25:70,0,228
+chr21	44009589	chr21:44009589:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,4:39:0,42,255	0/1:20,13:34:131,0,242	0/0:31,1:33:0,79,255
+chr21	44014384	chr21:44014384:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/0:47,1:49:0,126,255	0/1:22,22:44:255,0,255
+chr21	44014573	chr21:44014573:M	TTTTTTGTTTGTTTGTTTTTGTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:32:0,96,255	0/0:30,0:31:0,90,255	0/1:5,7:13:149,0,98
+chr21	44015611	chr21:44015611:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:23:0,49,255	0/0:24,0:29:0,81,255	0/1:20,14:35:158,0,255
+chr21	44018139	chr21:44018139:M	TTTTCTTTTTTTTTTTCTTTTT	<3.5>	.	.	Motif=TTTTCT	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/0:35,2:37:0,67,255	0/1:18,29:48:255,0,250
+chr21	44018692	chr21:44018692:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,20,195	0/0:6,0:6:0,18,101	0/1:9,4:13:31,0,118
+chr21	44022040	chr21:44022040:M	TTTCTTTCTTTTTTTTTTTCTTTC	<7>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:44,0:45:0,132,255	0/0:24,0:24:0,71,255	0/1:16,19:36:255,0,199
+chr21	44022277	chr21:44022277:M	TTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:7:0,20,155	0/0:2,0:4:0,11,85	0/1:4,13:17:255,0,69
+chr21	44025822	chr21:44025822:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,4:10:255,66,37,98,0,70	1/1:0,6,0:8:190,20,0,123,20,106	1/2:0,5,4:10:255,65,36,91,0,64
+chr21	44030247	chr21:44030247:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/0:42,0:42:0,123,255	0/1:23,20:44:233,0,255
+chr21	44034326	chr21:44034326:M	CCCCCAACCCCCCCCCCCACCCCC	<3.7>	.	.	Motif=CCCCCA	GT:AD:DP:PL	0/0:4,0:4:0,12,97	0/0:3,0:3:0,9,76	0/1:3,4:8:88,0,52
+chr21	44040771	chr21:44040771:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:21:0,61,255	0/1:16,4:20:9,0,213	0/1:8,5:14:56,0,99
+chr21	44043210	chr21:44043210:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:4:0,12,114	0/0:2,0:3:0,9,68	0/1:3,4:8:98,0,65
+chr21	44046507	chr21:44046507:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,0:23:0,65,255	0/0:11,0:18:0,35,185	0/1:7,5:16:38,0,89
+chr21	44047533	chr21:44047533:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,14,16,0:31:255,255,255,251,0,255,255,255,255,255	0/2:5,1,22,0:29:255,255,255,0,54,15,255,255,96,255	1/3:0,10,0,7:21:255,192,152,255,193,255,210,0,255,255
+chr21	44049879	chr21:44049879:M	TTTTTTTTTTGTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/0:42,0:44:0,126,255	0/1:15,16:34:255,0,255
+chr21	44056948	chr21:44056948:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,1:52:0,134,255	0/0:46,0:47:0,138,255	0/1:21,27:48:255,0,248
+chr21	44060276	chr21:44060276:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,4:14:35,47,197,0,97,122	0/2:7,2,4:13:32,35,169,0,67,105	0/1:14,11,0:26:131,0,173,201,209,255
+chr21	44060902	chr21:44060902:M	ATACATACATACATACA	<6.2>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:23,0:23:0,69,255	0/1:16,16:32:255,0,255
+chr21	44060916	chr21:44060916:M	ACACACACACACACACACACACACACACACAC	<16.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:12,8,0:20:2,0,19,62,79,255	0/1:13,12,0:27:11,0,15,85,90,255	0/2:11,1,8:25:198,211,237,0,39,255
+chr21	44064304	chr21:44064304:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTG	<15>,<20>,<22>	.	.	Motif=TG	GT:AD:DP:PL	0/2:9,0,10,0:21:143,199,255,0,163,103,198,255,138,255	2/3:1,0,8,7:16:197,243,255,104,189,158,122,222,0,193	0/1:12,14,0,0:27:255,0,255,255,212,255,255,212,255,255
+chr21	44076048	chr21:44076048:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:33:0,98,255	0/0:19,0:23:0,67,255	0/1:17,10:30:188,0,255
+chr21	44078441	chr21:44078441:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:9:9,0,98	0/1:12,4:18:25,0,161	0/1:9,8:18:87,0,112
+chr21	44085709	chr21:44085709:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:38:0,84,255	0/0:35,0:38:0,111,255	0/1:20,22:42:255,0,239
+chr21	44127856	chr21:44127856:M	AAAAAAAAAAAAAAAGAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:2,22:26:255,40,0
+chr21	44137693	chr21:44137693:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:35,0,35	0/1:5,5:11:42,0,42	0/0:4,0:5:0,1,44
+chr21	44193121	chr21:44193121:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:27,5,0	.	0/1:5,6:13:63,0,67
+chr21	44195083	chr21:44195083:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,2:12:0,1,135	1/1:1,7:9:105,10,0	0/0:28,0:30:0,74,255
+chr21	44199396	chr21:44199396:M	AAAAAAAAGAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:27:108,0,255	1/1:0,7:7:177,21,0	0/0:30,0:30:0,90,255
+chr21	44205391	chr21:44205391:M	AAAAAAAAAAAAAACAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:34,0,72	0/1:3,2:5:21,0,39	0/0:12,0:12:0,35,223
+chr21	44205747	chr21:44205747:M	TTTTTTTTTGTTTTTTTGTTTTGTTTTTTGTTTTATTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5:17:41,0,171	1/1:0,3:3:52,9,0	0/0:16,0:17:0,50,255
+chr21	44212356	chr21:44212356:M	TGAGTGAGTGAATGTGGGATGAATGAGTGAGTGA	<1.8>	.	.	Motif=TGAG	GT:AD:DP:PL	0/1:31,4:36:27,0,255	0/1:20,7:28:140,0,255	0/1:24,4:29:65,0,255
+chr21	44215767	chr21:44215767:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:6:0,18,109	1/1:0,3:4:41,1,0	0/0:4,0:6:0,17,94
+chr21	44220790	chr21:44220790:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,6:14:71,0,109	0/1:17,10:27:98,0,223	0/0:29,0:29:0,85,255
+chr21	44222935	chr21:44222935:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,15:22:217,0,66	0/1:10,12:22:148,0,112	0/0:24,0:24:0,71,255
+chr21	44232350	chr21:44232350:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:3:25,0,8	1/1:0,4:4:65,12,0	.
+chr21	44238860	chr21:44238860:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/1:5,6:11:70,0,52	0/1:2,2:6:20,0,31
+chr21	44243129	chr21:44243129:M	CCCCCCCCCCGCCCCCCC	<14>,<17>	.	.	Motif=C	GT:AD:DP:PL	0/2:5,0,7:14:75,111,255,0,82,47	1/2:0,6,9:15:255,136,219,161,0,135	0/0:7,0,0:9:0,23,215,22,134,114
+chr21	44254828	chr21:44254828:M	TTGTTGTTGTTGTT	<3.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:20,14:34:255,0,255	0/0:40,0:40:0,120,255
+chr21	44255506	chr21:44255506:M	AAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21,0:35:255,0,255,255,255,255	1/2:0,14,7:24:255,188,146,255,0,255	0/0:44,0,0:44:0,132,255,132,255,255
+chr21	44256420	chr21:44256420:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:35,0,35	0/0:3,0:3:0,9,51	0/0:1,0:1:0,3,17
+chr21	44257681	chr21:44257681:M	AAAAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,5:6:152,81,64,16,5,0	0/1:2,6,5:15:222,0,46,15,1,55	0/0:9,0,0:12:0,36,255,36,255,255
+chr21	44257694	chr21:44257694:M	AAATAAATAAATAAATAAATAAATAAATAAA	<6.5>,<6.8>,<33.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,4,0,3:7:113,33,21,59,30,48,89,0,27,105	1/2:0,6,6,0:12:204,47,14,49,0,14,236,50,50,255	0/0:15,0,0,1:18:0,43,255,36,255,243,39,255,255,255
+chr21	44264447	chr21:44264447:M	TTTTTCTTTTTCTTTTTCTTTTTTTTTT	<34>,<35>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,0,10:23:218,184,255,0,255,255	1/2:0,18,10:28:255,176,96,255,0,238	0/0:19,0,0:19:0,57,255,57,255,255
+chr21	44265035	chr21:44265035:M	TTTTTCTTTTCTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:120,0,65	1/1:0,10:10:172,29,0	0/0:5,0:5:0,15,89
+chr21	44266470	chr21:44266470:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,18:28:248,0,100	1/1:0,32:32:255,94,0	0/0:26,3:29:0,32,255
+chr21	44268689	chr21:44268689:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,15:18:255,34,0	0/1:2,11:14:150,0,4	0/1:12,8:20:84,0,155
+chr21	44269854	chr21:44269854:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:30:169,0,205	0/1:13,13:27:147,0,156	0/0:37,1:40:0,96,255
+chr21	44270162	chr21:44270162:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:9:65,0,47	0/1:1,6:8:81,0,6	0/0:18,0:19:0,56,255
+chr21	44271133	chr21:44271133:M	CTTTTCTTTCTTTTCTTTTCTTCTCTTTTTTTTTTTT	<7.2>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:14,12:27:133,0,157	1/1:1,22:25:255,55,0	0/0:20,0:22:0,61,255
+chr21	44276240	chr21:44276240:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,19:41:234,0,255	1/1:3,31:38:255,57,0	0/0:31,2:33:0,61,255
+chr21	44277413	chr21:44277413:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,2:9:10,0,91	0/1:7,3:11:19,0,98	0/1:1,2:5:23,0,18
+chr21	44278068	chr21:44278068:M	TTTTCTTTTCTTTTCTTTTCTTTCTTTTTTTT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:14,18:32:255,0,255	0/0:29,0:30:0,87,255	0/1:9,22:32:255,0,148
+chr21	44278712	chr21:44278712:M	TTATTTTATTTTATTTATTTTATTTTATTTTATATTTTATTTTATTTTATTTTATTTTATTTTATT	<12.2>,<14.2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:2,5,0:7:77,0,18,95,33,161	0/2:3,0,3:7:37,54,124,0,46,37	0/1:8,4,0:13:40,0,116,74,128,230
+chr21	44280278	chr21:44280278:M	AAAAGAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:169,0,225	0/0:40,0:42:0,122,255	0/1:21,18:40:209,0,255
+chr21	44303434	chr21:44303434:M	AAAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:108,12,0	1/1:0,4:4:115,12,0	.
+chr21	44308560	chr21:44308560:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:145,11,0	0/1:7,6:15:62,0,92	0/0:9,2:14:0,4,151
+chr21	44311151	chr21:44311151:M	CACACACAGACACACACACAGAGACAGACACGTGCACAAACACACACATGCAGACACACAGACATGCACACAGACGCACACACACACA	<11>,<28>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,1,3:6:81,63,106,0,23,37	0/1:2,3,1:6:64,0,37,40,16,83	0/2:2,0,2:4:53,59,104,0,46,40
+chr21	44337084	chr21:44337084:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:26:0,76,255	0/1:13,8:24:137,0,255	0/0:29,0:33:0,98,255
+chr21	44343669	chr21:44343669:M	AAAAAAAGAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:13,23:37:255,0,255	0/0:47,0:48:0,144,255
+chr21	44344383	chr21:44344383:M	AAAAAAAAAAAAAAAAAAAA	<14>,<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/3:1,12,0,5:20:255,71,105,255,141,255,255,0,255,255	2/3:0,0,10,2:13:255,255,255,44,65,34,255,255,0,255	1/3:1,10,0,7:18:255,104,170,255,200,255,252,0,255,246
+chr21	44356532	chr21:44356532:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,8:12:192,0,31	0/1:11,2:15:15,0,254	0/1:4,8:14:182,0,69
+chr21	44360569	chr21:44360569:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:145,0,181	1/1:0,18:19:255,55,0	0/1:13,12:26:140,0,167
+chr21	44362349	chr21:44362349:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/1:7,9:19:116,0,74	0/1:2,4:7:59,0,15
+chr21	44381936	chr21:44381936:M	GATATGATAGATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATGATAGATAGATAG	<15.2>,<17.2>	.	.	Motif=GATA	GT:AD:DP:PL	1/2:0,12,8:20:255,213,177,255,0,255	2/2:0,0,14:14:255,255,255,42,42,0	1/2:0,12,4:16:255,107,71,255,0,255
+chr21	44389874	chr21:44389874:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:25:137,0,158	0/0:23,2:25:0,38,255	0/1:19,19:40:245,0,227
+chr21	44394318	chr21:44394318:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/0:7,0:8:0,12,107	0/1:1,3:4:40,0,6
+chr21	44398207	chr21:44398207:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:31:198,0,181	1/1:0,20:21:255,51,0	0/1:18,12:31:129,0,247
+chr21	44403956	chr21:44403956:M	ACATACATACACACATGCACATACACATGCATACACACATACA	<9.8>	.	.	Motif=ACAT	GT:AD:DP:PL	0/1:16,11:27:86,0,158	1/1:0,18:20:255,51,0	0/1:13,9:22:69,0,126
+chr21	44404283	chr21:44404283:M	CATACACATATACATGCACACATACATGCACATACACATATACACACATGCATACACATACAAATACATGCAGACACATACA	<1.8>	.	.	Motif=CATACA	GT:AD:DP:PL	0/1:7,2:9:69,0,140	0/0:8,0:8:0,24,188	0/1:7,4:11:159,0,134
+chr21	44404370	chr21:44404370:M	CACACATACATACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:16,8:25:88,0,237	1/1:0,14:14:255,41,0	0/1:22,6:28:33,0,255
+chr21	44407132	chr21:44407132:M	TTCCTCCCTTCCTCCCTTCCTTCCTTCC	<33.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,3:3:36,8,0	1/1:0,2:2:24,5,0	1/1:0,1:1:12,3,0
+chr21	44407451	chr21:44407451:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:60,0,66	1/1:0,6:7:184,21,0	0/1:5,4:10:95,0,113
+chr21	44408655	chr21:44408655:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:13:40,0,92	1/1:0,9:10:148,27,0	0/1:3,7:10:89,0,22
+chr21	44430906	chr21:44430906:M	AATATAAATATA	<2.7>	.	.	Motif=AATATA	GT:AD:DP:PL	0/1:25,20:45:255,0,255	1/1:0,29:29:255,87,0	0/1:19,18:37:255,0,255
+chr21	44430965	chr21:44430965:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,22:47:255,0,255	1/1:1,32:35:255,74,0	0/1:23,16:40:177,0,255
+chr21	44445440	chr21:44445440:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,17:38:210,0,226	0/1:20,18:39:198,0,243	0/1:20,11:31:105,0,255
+chr21	44446004	chr21:44446004:M	AAAAAAAAAACAAAACAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,25:40:255,0,166	0/1:12,19:32:246,0,129	0/1:26,19:45:218,0,255
+chr21	44446922	chr21:44446922:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:110,0,93	0/1:6,5:13:61,0,67	0/1:6,9:18:117,0,65
+chr21	44448242	chr21:44448242:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:5,0,11	0/1:2,3:6:42,0,15	1/1:0,2:2:33,6,0
+chr21	44453121	chr21:44453121:M	CAAAAACAAAAACAAAAACAAAAACAAACAAACAAAAA	<7>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:15,18:39:255,0,242	0/1:10,11:29:182,0,166	0/1:13,10:31:155,0,228
+chr21	44468366	chr21:44468366:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,11:21:246,0,217	0/1:5,10:15:233,0,96	0/1:8,6:14:126,0,183
+chr21	44535897	chr21:44535897:M	AAAAAAAAAAAAAGGAAAAAAGAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,65,255	1/2:1,13,11:25:255,143,127,206,0,154	0/1:5,5,1:12:123,0,105,82,72,140
+chr21	44538423	chr21:44538423:M	CCCCCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	.	1/1:0,10,1:12:255,33,0,195,18,165	1/2:0,1,4:5:83,58,55,17,0,3
+chr21	44542743	chr21:44542743:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAGAAAAAAGAAAAAGAAAAAAA	<49>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:74,0,82	1/1:2,10:13:143,5,0	1/1:1,5:7:77,3,0
+chr21	44551494	chr21:44551494:M	GTGAGTGAGTGAGTGTGTGTGTGAGTGTGTGAGTGAGTGTGTGTGTGAG	<15.2>	.	.	Motif=GTGA	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,9:9:234,27,0	1/1:0,19:19:255,57,0
+chr21	44572835	chr21:44572835:M	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,12:15:255,221,196,26,27,0	1/2:0,10,8:18:255,132,80,164,0,112	2/2:0,0,9:9:255,177,152,27,26,0
+chr21	44582989	chr21:44582989:M	TTTTTCTTTCTTTCTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,37:37:255,109,0	1/1:0,33:33:255,98,0
+chr21	44583184	chr21:44583184:M	CTGAGTGAGCTGAGCTG	<3.6>	.	.	Motif=CTGAG	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,23:23:255,69,0	1/1:0,37:37:255,111,0
+chr21	44588754	chr21:44588754:M	TATGTATGTGTGTATATATATGTATGTGTGTGTGTAT	<9.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:19,4:28:0,22,126	1/1:3,8:15:52,5,0	0/1:14,6:23:2,0,69
+chr21	44588788	chr21:44588788:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:33,0:33:0,95,255	0/1:9,6:16:56,0,89	0/0:24,0:24:0,69,255
+chr21	44594823	chr21:44594823:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:22:27,0,229	0/1:4,4:10:40,0,62	1/1:1,7:10:128,11,0
+chr21	44599135	chr21:44599135:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<21>,<24>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,6,0,0:6:168,18,0,172,18,176,172,18,176,177	3/3:0,0,0,4:5:61,61,61,61,61,61,12,12,12,0	1/2:0,10,4,0:16:255,115,85,255,0,255,255,115,255,255
+chr21	44600560	chr21:44600560:M	ACTCACTCACTCATTCACTCACTCACCCACTCACTC	<8>	.	.	Motif=ACTC	GT:AD:DP:PL	0/1:12,12:24:159,0,160	0/0:23,0:23:0,68,255	0/1:13,17:30:230,0,155
+chr21	44606164	chr21:44606164:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6,0:12:70,0,70,104,88,244	0/1:10,4,1:16:32,0,131,59,122,227	0/2:3,0,7:11:100,127,225,0,43,19
+chr21	44615550	chr21:44615550:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:23:107,0,159	1/1:0,20:24:255,48,0	0/0:22,4:27:0,11,255
+chr21	44635346	chr21:44635346:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	1/1:0,0:1:0,0,0	0/1:5,2:7:14,0,64
+chr21	44645359	chr21:44645359:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,13:24:177,0,113	1/1:1,19:22:255,37,0	0/1:10,9:20:113,0,119
+chr21	44650215	chr21:44650215:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,21:30:255,0,79	1/1:1,30:31:255,74,0	0/1:9,15:24:202,0,94
+chr21	44651980	chr21:44651980:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:3:0,9,53	0/0:3,0:3:0,9,51	0/1:1,3:7:46,0,12
+chr21	44661282	chr21:44661282:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:64,0,70	1/1:0,4:5:79,14,0	0/0:3,0:5:0,14,75
+chr21	44672570	chr21:44672570:M	AAAACAAAAAAAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:31:193,0,211	1/1:0,34:34:255,100,0	0/1:16,22:38:255,0,184
+chr21	44674119	chr21:44674119:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:32:166,0,241	1/1:1,30:34:255,81,0	0/0:28,1:31:0,73,255
+chr21	44674732	chr21:44674732:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<23>,<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	2/4:0,0,5,1,2:8:176,178,199,42,66,51,147,149,17,140,140,136,0,119,131	3/4:1,0,0,7,4:12:217,239,255,232,255,255,38,77,77,43,97,115,114,0,80	1/2:0,7,10,0,0:17:255,255,243,193,0,156,255,255,193,255,255,255,193,255,255
+chr21	44674876	chr21:44674876:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,3:35:0,47,255	0/0:34,3:38:0,58,255	0/1:17,25:42:255,0,188
+chr21	44675528	chr21:44675528:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:138,0,255	1/1:0,46:46:255,135,0	0/1:18,26:44:255,0,205
+chr21	44689713	chr21:44689713:M	ATATATATATATATATATATATATATAT	<15>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:5:41,41,41,8,8,0	.	1/1:0,3,0:3:48,9,0,57,9,88
+chr21	44693648	chr21:44693648:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,138,0	1/1:0,44:44:255,132,0	1/1:0,46:47:255,138,0
+chr21	44708008	chr21:44708008:M	CACACACACACACACACACACACACACACACACACACACCACACA	<17.5>,<19.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,14,0:16:255,45,0,255,42,255	1/1:0,16,0:17:255,51,0,255,51,255	1/2:0,9,11:22:255,255,249,243,0,204
+chr21	44710075	chr21:44710075:M	CCCCCACCCCCAC	<2.3>	.	.	Motif=CCCCCA	GT:AD:DP:PL	.	1/1:0,25:25:255,75,0	0/0:23,0:23:0,69,255
+chr21	44716736	chr21:44716736:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:2,0,5:7:127,133,186,0,53,38	0/2:2,0,4:7:100,108,170,0,62,50	0/1:3,10,0:15:255,0,47,255,80,255
+chr21	44721227	chr21:44721227:M	ACACACACACACACACACACACACACACACACACACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,21:23:255,255,255,64,58,0	0/2:13,0,6:20:52,107,255,0,179,158	1/2:0,13,16:31:255,255,255,216,0,255
+chr21	44721299	chr21:44721299:M	ATAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAG	<10.8>,<12.8>,<13.8>	.	.	Motif=ATAG	GT:AD:DP:PL	2/2:0,0,19,0:19:255,255,255,56,57,0,255,255,56,255	2/3:0,0,12,11:23:255,255,255,199,200,134,185,217,0,151	1/2:1,11,11,0:23:255,189,255,189,0,255,255,208,255,255
+chr21	44721908	chr21:44721908:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,3:11:21,0,104	0/1:8,2:11:2,0,115	0/0:7,1:10:0,11,127
+chr21	44745301	chr21:44745301:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,30:32:255,57,0	0/1:29,19:49:193,0,255	0/1:22,19:41:226,0,255
+chr21	44752615	chr21:44752615:M	AGAGAGAAAGAGAGGGAGAGAGGGAGA	<12.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	0/1:13,12:25:143,0,161	0/1:13,10:23:119,0,175
+chr21	44757725	chr21:44757725:M	GGGGGGTGGGGGGGGGG	<18>	.	.	Motif=G	GT:AD:DP:PL	1/1:1,10:11:158,14,0	1/1:0,8:8:136,23,0	0/1:2,7:9:95,0,8
+chr21	44787093	chr21:44787093:M	AAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,10:23:73,124,255,0,90,60	0/2:14,1,10:27:60,117,255,0,123,109	1/2:0,20,10:39:255,123,144,239,0,255
+chr21	44794530	chr21:44794530:M	TTTTTTTGTTTTTTTTTTTTTTT	<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,6:14:174,100,144,92,0,134	0/1:3,8,2:14:111,0,35,113,10,221	1/1:0,20,0:21:255,62,0,255,63,255
+chr21	44800916	chr21:44800916:M	CAGAGACAGAGA	<1.7>	.	.	Motif=CAGAGA	GT:AD:DP:PL	0/1:22,19:41:255,0,255	0/1:26,26:52:255,0,255	1/1:0,42:42:255,126,0
+chr21	44826357	chr21:44826357:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,15:29:194,0,166	0/1:15,15:30:176,0,176	0/0:33,1:34:0,82,255
+chr21	44826837	chr21:44826837:M	AAAAAAAAAAAAAAAAAAGAAAAA	<17>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,6:30:255,107,89,255,0,255	1/2:1,13,7:24:255,102,151,255,0,255	1/1:0,36,0:40:255,119,0,255,119,255
+chr21	44828164	chr21:44828164:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:18:52,0,255	0/1:6,4:12:73,0,151	0/0:17,0:20:0,59,255
+chr21	44828783	chr21:44828783:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,13:20:200,0,34	0/1:6,5:12:61,0,69	0/0:17,0:17:0,50,255
+chr21	44830608	chr21:44830608:M	GGGGTGGGGGTGGGGGTGGGGGTGGGGG	<5.7>	.	.	Motif=GGGGTG	GT:AD:DP:PL	0/1:10,6:16:67,0,144	0/1:5,4:9:46,0,64	0/0:15,0:15:0,44,255
+chr21	44839696	chr21:44839696:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:59,0,59	0/1:6,7:14:89,0,61	1/1:0,12:15:239,43,0
+chr21	44842396	chr21:44842396:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,8:11:207,0,3	1/1:0,7:10:226,27,0	0/1:1,3:7:84,0,15
+chr21	44844250	chr21:44844250:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,30:31:255,73,0	1/1:2,31:33:255,61,0	1/1:0,40:40:255,118,0
+chr21	44848127	chr21:44848127:M	ACCTCCACCTCC	<1.8>	.	.	Motif=ACCTCC	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:21,19:40:255,0,255	1/1:0,41:41:255,123,0
+chr21	44852184	chr21:44852184:M	TTTTTTATTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:28:186,0,184	0/0:36,0:36:0,106,255	0/1:22,14:36:155,0,255
+chr21	44853508	chr21:44853508:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:9:106,57,62,43,0,86	1/2:1,4,3:8:110,58,62,50,0,100	1/1:1,11,0:13:186,20,0,219,38,255
+chr21	44866210	chr21:44866210:M	ACACACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,19:19:255,55,0	1/1:0,23:28:255,75,0	1/1:0,15:15:247,44,0
+chr21	44866424	chr21:44866424:M	ACACACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:80,12,0	1/1:0,1:2:19,3,0	1/1:0,2:2:39,6,0
+chr21	44870526	chr21:44870526:M	AAAAAAAAAAAAAAAAAAAAAAA	<14>,<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17,1:20:255,45,0,255,21,255	1/1:0,12,0:14:255,42,0,255,42,255	2/2:0,0,4:4:108,110,113,12,12,0
+chr21	44877125	chr21:44877125:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:13:65,0,75	0/1:9,4:14:29,0,126	0/1:4,19:23:255,0,4
+chr21	44880719	chr21:44880719:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:35:255,0,255	0/1:22,12:37:222,0,255	1/1:0,15:15:255,45,0
+chr21	44882992	chr21:44882992:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,19:42:255,0,255	0/1:12,24:38:255,0,222	1/1:0,20:21:255,60,0
+chr21	44883773	chr21:44883773:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:10:56,0,115	0/1:5,2:9:33,0,113	1/1:0,7:9:197,24,0
+chr21	44892605	chr21:44892605:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:9,0,26	0/1:1,1:3:11,0,10	1/1:0,5:5:85,15,0
+chr21	44892734	chr21:44892734:M	AAAAAAAAAAACAAAAAACAAAAAACAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,91,255	0/1:5,13:18:174,0,34	0/0:35,0:36:0,105,255
+chr21	44904606	chr21:44904606:M	ACACAAACACACCACATGCACGCACACACACTCGCACACACATACACACACCAAACACACACACATGCACTCACGCACATACACCACACACA	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:1,1:2:50,0,21	1/1:0,3:4:167,9,0	1/1:0,0:1:0,0,0
+chr21	44906128	chr21:44906128:M	CTTCCCTCCCTTCCCCTTCCCTCCCTTCCCTCCCTTCCCTCCCTCCCTTCCCTCCCCTTCTCTTCCCTTCC	<11.6>	.	.	Motif=CTTCC	GT:AD:DP:PL	0/1:4,8:12:184,0,72	1/1:0,21:21:255,63,0	0/0:3,0:4:0,10,83
+chr21	44914933	chr21:44914933:M	AAAAAAAAAAGAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,93,255	0/0:34,1:36:0,86,255	0/1:21,15:39:137,0,245
+chr21	44922659	chr21:44922659:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,78,0	1/1:0,32:35:255,101,0	1/1:0,22:26:255,76,0
+chr21	44925138	chr21:44925138:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,2:34:0,59,255	0/1:19,13:33:132,0,244	0/0:38,3:42:0,69,255
+chr21	44925397	chr21:44925397:M	AAGGAAGAAGGAAGGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<19.5>,<20.5>	.	.	Motif=AAGG	GT:AD:DP:PL	1/2:0,2,2:5:65,17,8,30,0,18	1/2:0,1,3:7:63,25,14,28,0,15	1/1:0,9,1:14:212,33,0,133,21,104
+chr21	44935942	chr21:44935942:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,97,0	0/1:7,12:19:160,0,68	1/1:1,25:27:255,61,0
+chr21	44938103	chr21:44938103:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,0:47:0,138,255	0/1:20,19:41:220,0,255	0/0:38,2:40:0,81,255
+chr21	44940673	chr21:44940673:M	TTTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,18:33:255,255,245,252,0,162	2/2:0,2,41:44:255,255,255,128,94,0	1/2:0,21,31:52:255,255,255,255,0,226
+chr21	44950101	chr21:44950101:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:21:88,0,171	0/0:16,1:19:0,38,255	0/1:16,18:34:228,0,192
+chr21	44955208	chr21:44955208:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,23:26:255,40,0	1/1:2,15:18:230,18,0	1/1:1,17:18:255,35,0
+chr21	44963376	chr21:44963376:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,9,11:23:255,195,255,147,0,197	2/2:2,0,15:19:248,255,255,21,50,0	1/2:4,11,14:30:255,192,255,132,0,236
+chr21	44968754	chr21:44968754:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:51,0,97	0/0:16,0:17:0,49,255	0/1:6,5:12:53,0,79
+chr21	44988460	chr21:44988460:M	TGTGTGTGCGTGTGTG	<9>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,9:24:96,0,209	0/0:29,0:29:0,85,255	0/1:17,16:33:196,0,213
+chr21	44988491	chr21:44988491:M	GTGTGCGTGTGCATGCGTGTGCGTGCGTGTGTGTGCGTGTGCGTGTGC	<8.3>	.	.	Motif=GTGTGC	GT:AD:DP:PL	0/0:14,4:18:0,12,71	0/0:23,0:23:0,52,165	0/1:5,7:12:23,0,9
+chr21	44992540	chr21:44992540:M	GTGTGTGTGTGTGTGTGAGAGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,11:24:235,0,255	0/0:28,0:28:0,84,255	0/1:11,20:32:255,0,216
+chr21	44994479	chr21:44994479:M	TGTGTGAGTGTGCGTGTGTGTGTGTTGTGTGTGTGTGTGTG	<21.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,6:15:255,160,133,169,0,220	1/1:0,18,0:19:255,56,0,255,57,255	1/2:0,13,7:20:255,185,147,237,0,255
+chr21	45013931	chr21:45013931:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,55,0	1/1:0,15:18:255,52,0	1/1:0,19:21:255,61,0
+chr21	45029237	chr21:45029237:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:17:158,0,41	0/1:10,14:28:180,0,110	0/1:13,9:22:95,0,165
+chr21	45052603	chr21:45052603:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7:20:72,0,183	0/0:33,0:33:0,97,255	0/1:18,15:34:175,0,231
+chr21	45057536	chr21:45057536:M	TTTTTTCTTTTCTTTCTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,9:30:88,0,255	0/0:27,0:27:0,79,255	0/1:15,3:18:2,0,219
+chr21	45059786	chr21:45059786:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,2:19:0,19,255	0/1:15,9:26:94,0,190	0/0:28,1:30:0,70,255
+chr21	45061429	chr21:45061429:M	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT	<10.8>,<11.8>	.	.	Motif=TCTG	GT:AD:DP:PL	0/2:16,1,11:28:237,184,255,0,255,255	0/1:15,9,0:24:88,0,193,133,255,255	0/2:19,0,14:33:255,247,255,0,255,255
+chr21	45065528	chr21:45065528:M	CCCCCCCCCCC	<14>	.	.	Motif=C	GT:AD:DP:PL	0/0:15,0:16:0,48,255	0/0:16,0:17:0,51,255	0/1:5,6:11:129,0,114
+chr21	45092899	chr21:45092899:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,43:44:255,111,0	0/1:29,26:55:255,0,255
+chr21	45105080	chr21:45105080:M	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<6.4>	.	.	Motif=TTGTT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,28:28:255,82,0	1/1:0,29:29:255,86,0
+chr21	45106194	chr21:45106194:M	TTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,11:34:255,200,105,255,0,255	1/1:0,26,0:29:255,78,0,255,84,255	0/2:22,1,15:41:255,255,255,0,255,255
+chr21	45113524	chr21:45113524:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:29,8:38:4,0,237	0/0:38,0:38:0,103,255	0/1:12,11:23:66,0,77
+chr21	45123275	chr21:45123275:M	GTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:0,41:41:255,120,0	0/1:18,23:41:255,0,203
+chr21	45124767	chr21:45124767:M	GTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<24>,<25>,<27>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,9,7:16:255,255,255,183,194,164,119,159,0,213	2/2:0,3,16,0:19:247,195,223,53,4,0,255,255,57,255	1/3:0,12,0,6:18:255,159,133,255,164,255,255,0,209,255
+chr21	45134690	chr21:45134690:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,15:19:225,2,0	0/1:5,22:28:255,0,4	0/1:13,7:24:54,0,199
+chr21	45138923	chr21:45138923:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:26:86,0,201	0/0:17,2:21:0,25,255	0/1:9,12:22:143,0,100
+chr21	45166880	chr21:45166880:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,52:53:255,138,0	0/1:18,38:56:255,0,172
+chr21	45174683	chr21:45174683:M	ATACATACATACATACATACATACATACATACATACATACATACAT	<10.5>	.	.	Motif=ATAC	GT:AD:DP:PL	0/1:16,16:33:210,0,221	1/1:0,37:38:255,111,0	0/0:27,0:28:0,82,255
+chr21	45184449	chr21:45184449:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13:17:242,29,0	1/1:2,21:29:255,49,0	0/1:12,12:25:142,0,152
+chr21	45188614	chr21:45188614:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,21:35:255,0,235	1/1:0,25:27:255,75,0	0/0:52,0:54:0,161,255
+chr21	45189734	chr21:45189734:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/1:17,11:30:104,0,228	0/0:36,1:39:0,96,255
+chr21	45191850	chr21:45191850:M	ATATATATATATATATATATATATATATATAT	<9.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,3:9:101,12,64,94,0,88	2/2:0,0,3:5:15,28,97,6,14,0	1/2:0,2,0:3:50,3,9,48,0,47
+chr21	45191881	chr21:45191881:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:18:255,36,0	1/1:0,0:1:0,0,0	1/1:0,18:19:255,56,0
+chr21	45197500	chr21:45197500:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:16,5:22:21,0,219	0/1:11,9:20:99,0,135
+chr21	45205263	chr21:45205263:M	AAAGAAAGAAAGAAAGAAAGAAAGAAATGAAA	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:31,0:32:0,83,255	0/0:22,0:22:0,64,255	0/1:10,15:30:204,0,86
+chr21	45219990	chr21:45219990:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,7:15:83,107,255,0,143,101	1/2:1,3,12:16:227,155,170,34,0,5	0/1:11,7,1:21:168,0,250,125,175,255
+chr21	45225071	chr21:45225071:M	TTGTTTTGTTTTGTTTTGTTTTGTT	<4>	.	.	Motif=TTGTT	GT:AD:DP:PL	0/1:34,24:58:255,0,255	1/1:0,52:53:255,154,0	0/0:45,0:45:0,133,255
+chr21	45243231	chr21:45243231:M	AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAACAAAAGAAAAAAAGAAAAA	<59>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,0:5:5,0,70	0/1:1,3:4:74,0,16	0/0:6,0:6:0,18,166
+chr21	45249978	chr21:45249978:M	AAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,28:42:255,0,224	0/1:16,16:34:255,0,255	0/0:22,0:29:0,85,255
+chr21	45275885	chr21:45275885:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,14:39:146,0,255	0/1:16,9:26:93,0,207	0/0:32,0:32:0,94,255
+chr21	45287191	chr21:45287191:M	GCCCCGGCCCCTGCCCCTGCCCCTGCCCCTG	<6.2>	.	.	Motif=GCCCCT	GT:AD:DP:PL	0/1:4,4:8:51,0,51	0/0:7,1:8:0,6,105	0/0:5,0:5:0,15,91
+chr21	45290565	chr21:45290565:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:29:205,0,141	0/1:19,16:38:185,0,226	0/0:41,0:41:0,120,255
+chr21	45308087	chr21:45308087:M	ACACACATACACAGACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,11:37:255,0,255	1/1:0,25:25:255,75,0	0/1:20,15:35:255,0,255
+chr21	45311773	chr21:45311773:M	ACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:22,1:26:0,48,255	0/1:8,22:32:255,0,51
+chr21	45311875	chr21:45311875:M	CCATCCATCCATCCATCCATCCATCCATCCATTCATCCATCCATCCATCCATCCA	<14.8>	.	.	Motif=CCAT	GT:AD:DP:PL	0/1:9,11:20:147,0,109	1/1:0,14:14:248,41,0	0/1:3,9:13:127,0,25
+chr21	45346258	chr21:45346258:M	TTTTTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:23:0,66,255	0/1:12,28:42:255,0,234	0/0:13,0:17:0,47,255
+chr21	45350807	chr21:45350807:M	CACACACACACACACACACAC	<8.5>,<9.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,42,0:42:255,126,0,255,124,255	1/2:0,22,22:45:255,255,255,255,0,255	1/1:0,48,0:48:255,144,0,255,142,255
+chr21	45398792	chr21:45398792:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:41:0,122,255	0/0:33,0:36:0,105,255	0/1:17,8:28:140,0,255
+chr21	45401127	chr21:45401127:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,6:7:92,111,170,2,18,0	0/2:7,0,6:13:66,102,247,0,102,84	0/1:6,10,4:21:131,0,88,115,21,255
+chr21	45401382	chr21:45401382:M	TTTGTTTGTTT	<1.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:39,0:39:0,115,255	0/1:29,24:53:255,0,255
+chr21	45412238	chr21:45412238:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:21:255,62,0	1/1:0,11:15:255,37,0	1/1:0,22:27:255,75,0
+chr21	45428891	chr21:45428891:M	TTTCTTTCTTTTCTTTTTTTTTTTT	<4.8>,<5.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:16,9,0:25:87,0,214,156,241,255	0/1:18,18,0:36:216,0,217,255,255,255	0/2:15,2,8:26:74,106,255,0,190,213
+chr21	45432237	chr21:45432237:M	GCTGGGGCTGGGGCTGGGCTGG	<2.7>	.	.	Motif=GCTGGG	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/0:27,0:27:0,80,255	0/1:15,16:31:210,0,191
+chr21	45437211	chr21:45437211:M	CACACACACACACAGACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/0:6,2:8:0,1,40	0/0:12,0:12:0,31,117	1/1:0,3:4:28,7,0
+chr21	45437246	chr21:45437246:M	ACACACACACACTCACACACTCAGACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,3:9:31,0,89	0/0:17,1:18:0,35,255	1/1:0,4:6:91,17,0
+chr21	45437359	chr21:45437359:M	CACACACACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,1:1:19,3,0	1/1:0,7:7:126,21,0	1/1:0,2:2:37,6,0
+chr21	45437435	chr21:45437435:M	CACACACACACTCACTCACAGACAGACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:29,10:40:126,0,255	0/1:25,5:31:37,0,255	0/1:13,8:23:140,0,255
+chr21	45437625	chr21:45437625:M	CACACACACTCACACA	<6>,<10>,<11>,<12>,<16>	.	.	Motif=CA	GT:AD:DP:PL	3/5:0,1,1,3,2,4:11:159,159,182,96,84,94,70,57,76,77,78,68,76,75,90,74,87,18,0,16,118	1/3:0,3,1,2,2,0:8:103,81,96,58,19,81,38,0,69,74,43,6,68,73,85,120,104,100,91,100,198	2/4:0,0,4,1,4,0:9:150,167,219,56,57,30,47,51,17,24,45,57,0,17,30,164,219,57,51,57,220
+chr21	45437689	chr21:45437689:M	CACACACACACACACACTCAGACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	0/1:2,3:8:66,0,17	0/1:1,3:5:50,0,5	1/1:0,7:12:181,31,0
+chr21	45437925	chr21:45437925:M	CACACACACACACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:10,0:12:0,15,77	0/0:10,0:12:0,30,107	1/1:0,4:4:36,10,0
+chr21	45437965	chr21:45437965:M	CACACACACACTCACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:14,0:18:0,2,165	0/0:10,0:14:0,18,137	1/1:1,5:6:61,2,0
+chr21	45438007	chr21:45438007:M	CACACACACACTCACTCACACACAGACACACA	<14>,<17>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,2,3:5:32,19,47,22,0,25	1/2:0,3,2:6:36,10,24,35,0,50	0/0:3,0,1:5:0,1,40,3,12,17
+chr21	45438249	chr21:45438249:M	CACACACACACACTCACACTCAGACACACA	<14>,<16>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,2,0:9:1,0,26,21,34,65	0/0:15,3,1:20:0,21,100,36,96,130	1/2:0,3,3:8:38,19,23,32,0,47
+chr21	45438327	chr21:45438327:M	CACACACACACACTCACACACTCAGACACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/1:2,4:7:51,0,17	0/1:4,3:11:31,0,48	0/1:5,6:15:66,0,78
+chr21	45438371	chr21:45438371:M	CACACACACACACTCACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:35,0:36:0,108,255	0/0:25,0:25:0,75,255	0/1:17,15:32:255,0,255
+chr21	45442905	chr21:45442905:M	GGTGGTGGTGCTGGTGTGGGCGGTGGTGGTGCTGGTG	<6.3>,<11.3>	.	.	Motif=GGT	GT:AD:DP:PL	0/1:8,8,3:20:134,0,255,133,56,191	0/1:9,4,2:15:55,0,243,63,72,128	1/2:2,11,8:21:255,64,246,214,0,209
+chr21	45452843	chr21:45452843:M	ATGTATGTATGT	<2.5>	.	.	Motif=ATGT	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:22,13:35:255,0,255	1/1:0,28:28:255,84,0
+chr21	45470482	chr21:45470482:M	TTTTTTTTTTGTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,12:33:116,0,255	0/1:9,8:18:97,0,100	0/0:18,0:19:0,55,255
+chr21	45479340	chr21:45479340:M	ACACACACTACACACAC	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:18,11:29:255,0,255	0/1:13,14:27:255,0,255	0/0:44,0:44:0,132,255
+chr21	45479602	chr21:45479602:M	CACACACACACACACA	<7>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,15:26:218,0,135	0/1:17,17:34:213,0,208	0/1:18,15:33:191,0,241
+chr21	45484083	chr21:45484083:M	ACACACACACAC	<7>	.	.	Motif=AC	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:12,2:14:0,5,182	0/1:15,5:20:35,0,223
+chr21	45484399	chr21:45484399:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	0/1:27,5:32:4,0,255	0/0:21,0:21:0,62,255	0/1:18,12:30:141,0,250
+chr21	45495709	chr21:45495709:M	CACACATACACGCACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	0/1:23,19:42:208,0,255	0/1:25,18:44:175,0,255	1/1:0,44:46:255,129,0
+chr21	45511050	chr21:45511050:M	ACACCCACACCCATCCACACCCCCACACACCACACACACA	<7>	.	.	Motif=ACACCC	GT:AD:DP:PL	0/1:5,6:11:83,0,65	1/1:0,8:8:154,24,0	0/0:10,0:10:0,30,196
+chr21	45515164	chr21:45515164:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,19:29:255,0,84	1/1:4,34:40:255,34,0	0/0:32,1:34:0,72,255
+chr21	45519571	chr21:45519571:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:71,0,0	1/1:0,9:9:151,26,0	0/1:1,1:3:9,0,20
+chr21	45521021	chr21:45521021:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,14:24:195,0,85	1/1:2,37:39:255,80,0	0/0:35,2:37:0,73,255
+chr21	45527941	chr21:45527941:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,14,12:28:255,183,255,219,0,255	0/2:13,1,9:23:88,136,255,0,171,169	1/1:0,20,0:22:255,64,0,255,65,255
+chr21	45537725	chr21:45537725:M	CCCACCCACCCAC	<2.2>	.	.	Motif=CCCA	GT:AD:DP:PL	0/1:12,4:16:20,0,153	0/1:6,2:8:9,0,72	0/1:10,7:17:65,0,114
+chr21	45541025	chr21:45541025:M	AAGAAGAAGAAGAA	<6.7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,43:43:255,129,0	0/1:24,16:40:255,0,255	1/1:0,35:35:255,105,0
+chr21	45558796	chr21:45558796:M	TTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:10,12:23:153,0,108	0/0:12,1:13:0,20,199
+chr21	45566179	chr21:45566179:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,18,168	0/1:8,3:12:25,0,98	0/0:15,2:19:0,21,242
+chr21	45591594	chr21:45591594:M	ACACACCATCACACCACACACACAAAACACATCACATAGAGACACACACCACACACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:24,13:37:231,0,255	0/1:11,4:23:87,0,255	0/1:17,4:21:42,0,255
+chr21	45597422	chr21:45597422:M	TTTATTTATTTATTTATTTATTTATTTATT	<6.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:18,11:29:127,0,255	0/0:31,0:31:0,91,255	0/1:16,18:34:238,0,201
+chr21	45616060	chr21:45616060:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,47,0	0/1:4,19:23:255,0,1	1/1:2,21:23:255,32,0
+chr21	45624081	chr21:45624081:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:6:69,0,0	0/1:3,5:8:59,0,26	0/1:8,9:17:103,0,86
+chr21	45627812	chr21:45627812:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:17:78,0,115	0/1:8,4:14:28,0,113	1/1:2,14:16:209,12,0
+chr21	45641986	chr21:45641986:M	TTTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:10:233,88,60,79,0,53	1/2:0,6,7:13:255,118,81,101,0,64	0/1:6,8,1:16:188,0,137,117,135,244
+chr21	45644506	chr21:45644506:M	TTTTTTTCTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,36:38:255,74,0	1/1:0,46:47:255,138,0	0/1:15,27:42:255,0,157
+chr21	45645239	chr21:45645239:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:42:255,124,0	1/1:0,39:39:255,115,0	1/1:0,38:39:255,115,0
+chr21	45646054	chr21:45646054:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCT	<26.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,3:6:64,16,0	1/1:0,3:6:44,11,0	1/1:0,5:6:56,13,0
+chr21	45646108	chr21:45646108:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,8,0,8:20:255,235,206,255,167,255,197,0,232,208	1/3:0,4,0,6:14:255,200,188,206,124,203,82,0,93,75	2/3:0,0,5,8:17:255,255,255,176,176,131,122,128,0,83
+chr21	45647063	chr21:45647063:M	AAAAAAAAAACAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,42:42:255,124,0	0/1:18,20:38:255,0,223
+chr21	45652443	chr21:45652443:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:82,0,101	0/1:9,6:15:60,0,111	0/0:20,1:23:0,49,255
+chr21	45654339	chr21:45654339:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,14,81	0/1:4,1:5:2,0,53	0/1:1,4:6:63,0,0
+chr21	45659338	chr21:45659338:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:60,0,85	0/0:8,1:11:0,14,130	0/0:11,0:11:0,32,189
+chr21	45662272	chr21:45662272:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,3:19:255,78,30,255,0,255	1/2:0,10,6:19:255,173,140,255,0,243	1/1:0,9,0:10:255,30,0,255,30,255
+chr21	45663159	chr21:45663159:M	TCTCCTCTCTCTCTCTCTCTCTCTC	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,38:39:255,114,0	1/1:0,37:37:255,109,0
+chr21	45664005	chr21:45664005:M	TTTTTCTTTTTTTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,21:23:255,31,0	1/1:0,18:18:255,53,0	1/1:1,23:25:255,56,0
+chr21	45664213	chr21:45664213:M	AATAATAATAATATAAGAATAATAATAATA	<4.3>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,9:9:249,27,0	1/1:0,9:9:249,27,0	0/1:17,8:25:146,0,255
+chr21	45664591	chr21:45664591:M	TTTTATTTTTTTTAATTTTTTTTTTCTTTTCTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,17:26:255,0,169	0/1:12,12:24:255,0,255	0/0:28,0:28:0,84,255
+chr21	45667076	chr21:45667076:M	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTC	<9.2>,<10.2>,<17.2>	.	.	Motif=TTCT	GT:AD:DP:PL	1/3:0,11,0,8:19:255,221,188,255,220,255,255,0,211,255	1/3:0,10,0,6:16:255,165,135,255,164,255,255,0,180,255	1/2:0,11,8,0:19:255,129,96,206,0,153,255,150,207,255
+chr21	45669788	chr21:45669788:M	TGTGTGTGTGTGTGTGTGT	<8.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:5,3,4:15:52,43,113,0,16,175	0/1:2,3,0:5:21,0,10,36,24,141	0/1:5,1,0:8:12,0,37,36,59,181
+chr21	45669806	chr21:45669806:M	TATATATATATATATATATATATATATATATATATATATAT	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:10:222,13,0	1/1:0,0:2:27,5,0	0/0:1,0:4:0,8,48
+chr21	45676368	chr21:45676368:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,11:37:101,0,255	0/1:20,22:42:255,0,236	0/1:25,28:53:255,0,255
+chr21	45678306	chr21:45678306:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,3,10:26:115,76,255,0,88,100	0/2:15,3,15:33:141,147,255,0,149,133	0/1:25,9,0:35:159,0,255,221,255,255
+chr21	45678319	chr21:45678319:M	AATAATAATAATAAAATAA	<8.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:12,10:27:168,0,251	0/1:19,10:33:147,0,255	1/1:0,27:36:255,33,0
+chr21	45679079	chr21:45679079:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:33,0,48	0/1:5,4:10:42,0,58	1/1:0,4:5:71,12,0
+chr21	45684056	chr21:45684056:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:7:14,0,68	0/1:1,4:5:52,0,2	0/1:5,2:8:11,0,72
+chr21	45685916	chr21:45685916:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:7:32,0,42	0/1:2,2:5:29,0,19	0/0:6,0:6:0,18,103
+chr21	45691385	chr21:45691385:M	TATATATATATATATCTCATATATATATTATATATATATAAAATATATATATCATATATAT	<32.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,5:18:57,0,167	1/1:0,1:1:20,3,0	0/1:3,2:5:27,0,47
+chr21	45691457	chr21:45691457:M	TGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,1:34:0,78,255	0/0:17,0:21:0,46,193	0/1:11,12:23:75,0,63
+chr21	45696793	chr21:45696793:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,27:42:255,0,158	0/1:27,18:48:190,0,255	0/0:33,1:34:0,82,255
+chr21	45697755	chr21:45697755:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:19,0,128	0/0:13,1:16:0,18,206	0/1:19,4:24:1,0,255
+chr21	45714436	chr21:45714436:M	ACACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:26,17:43:182,0,255	0/0:44,0:44:0,130,255
+chr21	45721413	chr21:45721413:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:10:76,0,41	0/1:5,4:10:49,0,55	1/1:0,8:10:159,29,0
+chr21	45731869	chr21:45731869:M	CTTTTTTTTTTCTTTTGCTTT	<3.7>	.	.	Motif=CTTTTT	GT:AD:DP:PL	0/1:15,16:31:255,0,252	0/1:21,24:46:255,0,255	0/0:46,1:47:0,117,255
+chr21	45732505	chr21:45732505:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:34:0,80,255	0/0:38,2:41:0,84,255	0/1:22,21:43:255,0,255
+chr21	45740584	chr21:45740584:M	GTGTGTGTGTGCATGTGAGTGTGTGTGTGGTGTGTGTAGTGTGTGTGTGTGTGTGAAGTGTGTGTG	<34>,<36>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,0,4:15:73,101,245,0,176,255	0/2:4,0,2:6:41,50,99,0,62,95	0/1:5,9,0:16:104,0,39,143,80,255
+chr21	45744119	chr21:45744119:M	TATATATATATATACATATGTATGTATATAACATATATAT	<21>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,16:40:189,0,255	0/1:14,12:26:140,0,175	0/0:43,1:44:0,111,255
+chr21	45750396	chr21:45750396:M	CCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	.	.	1/1:0,4:5:125,15,0
+chr21	45750897	chr21:45750897:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,23:52:255,0,255	0/1:22,22:45:255,0,255	0/0:48,0:48:0,144,255
+chr21	45752969	chr21:45752969:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,2:6:17,0,45	0/1:2,0:3:2,0,24	0/1:2,3:7:51,0,14
+chr21	45757891	chr21:45757891:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:30:184,0,191	0/1:14,16:32:197,0,163	1/1:1,27:30:255,70,0
+chr21	45776463	chr21:45776463:M	TCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTGTCTCCCTCT	<10.8>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:11,11:25:75,0,74	0/1:7,9:17:66,0,42	0/0:18,0:18:0,50,220
+chr21	45786127	chr21:45786127:M	AATAAAAAAATAAATAAATAAATAAATAAAT	<8>,<8.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/2:13,2,9:24:107,130,255,0,191,196	0/1:10,4,2:16:43,0,204,50,134,213	0/1:25,4,0:29:4,0,255,86,255,255
+chr21	45786290	chr21:45786290:M	TTTTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:1,27:30:255,70,0	0/1:27,11:38:91,0,255
+chr21	45789425	chr21:45789425:M	TGTGTATGTGTA	<1.7>	.	.	Motif=TGTGTA	GT:AD:DP:PL	0/1:21,18:39:255,0,255	0/1:17,18:35:255,0,255	0/0:37,0:37:0,111,255
+chr21	45795310	chr21:45795310:M	TTTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:36:0,105,255	0/0:27,1:30:0,70,255	0/1:25,10:38:69,0,255
+chr21	45810219	chr21:45810219:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGTGTGTGTG	<22>,<26>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,0,4:21:56,106,255,0,255,255	0/2:17,0,8:27:182,232,255,0,255,255	0/1:8,10,0:19:123,0,99,178,151,255
+chr21	45810430	chr21:45810430:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,18:38:234,0,243	0/1:26,19:45:203,0,255	0/0:24,2:29:0,48,255
+chr21	45816743	chr21:45816743:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,1,10:27:110,167,255,0,239,236	0/2:11,0,17:28:222,255,255,0,166,114	0/1:18,15,1:34:178,0,243,255,255,255
+chr21	45823723	chr21:45823723:M	TTTTTTTTTTATTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,75,0	1/1:0,40:45:255,114,0	1/1:2,35:42:255,77,0
+chr21	45826259	chr21:45826259:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:31:0,90,255	0/1:10,15:27:183,0,106	0/0:25,0:26:0,76,255
+chr21	45831409	chr21:45831409:M	AAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:255,41,0	0/1:5,14:20:255,0,82	0/1:1,13:16:255,0,1
+chr21	45831704	chr21:45831704:M	AGTTAGTTAGTTAGTT	<5>	.	.	Motif=AGTT	GT:AD:DP:PL	0/1:30,17:47:190,0,255	0/1:17,18:35:224,0,206	0/1:22,13:35:141,0,255
+chr21	45840457	chr21:45840457:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:13:1,0,134	0/1:6,7:17:90,0,63	0/1:9,3:12:16,0,120
+chr21	45842389	chr21:45842389:M	TTTGTTTGTTTGTTTGTTTGTT	<4.5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:21,15:36:183,0,255	0/1:20,29:49:255,0,219	0/0:40,0:40:0,118,255
+chr21	45851607	chr21:45851607:M	ATAGATGGATGGATAGATAGATAGATAGATAGATAG	<8>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:17,15:32:189,0,224	0/1:18,13:31:139,0,227	0/1:26,16:43:182,0,255
+chr21	45868412	chr21:45868412:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,71	1/1:0,4:8:68,12,0	0/1:6,1:10:6,0,80
+chr21	45877796	chr21:45877796:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,22:41:255,0,238	0/1:16,18:35:228,0,183	0/1:22,23:45:255,0,255
+chr21	45919815	chr21:45919815:M	GTGTGTGTGTGTGTGTGTGTGTG	<7.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,12:32:249,0,176	0/1:18,12:35:227,0,255	0/1:6,13:29:255,0,137
+chr21	45975615	chr21:45975615:M	GTGTGGGTGTGGGTG	<1.5>	.	.	Motif=GTGTGG	GT:AD:DP:PL	0/1:12,20:32:255,0,137	0/0:36,0:37:0,108,255	0/1:12,28:41:255,0,111
+chr21	45977004	chr21:45977004:M	TGGGGGTGGGGGTGGGGGTGGGGGTGG	<3.5>	.	.	Motif=TGGGGG	GT:AD:DP:PL	0/1:3,7:10:105,0,28	1/1:0,10:10:181,29,0	0/1:9,8:17:100,0,119
+chr21	45980161	chr21:45980161:M	ATAATAATAATAATAATAA	<5.3>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:14,16:30:216,0,179	1/1:0,34:34:255,100,0	0/1:13,14:27:180,0,162
+chr21	45980178	chr21:45980178:M	AAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAAGGAGAAG	<22.5>	.	.	Motif=AAGGAG	GT:AD:DP:PL	0/1:20,7:27:10,0,255	0/0:25,0:25:0,75,255	0/0:19,1:20:0,47,255
+chr21	46016495	chr21:46016495:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	0/1:19,15:35:165,0,246	1/1:1,49:50:255,129,0
+chr21	46018181	chr21:46018181:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,18,15:34:255,255,193,255,0,240	0/2:17,0,18:36:255,255,255,0,255,255	1/2:0,19,17:36:255,255,206,255,0,244
+chr21	46019068	chr21:46019068:M	TTTTTTTTTTTT	<13>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,8,7:17:255,255,255,129,124,81,162,147,0,119	1/2:1,17,6,0:26:255,140,100,255,0,255,255,98,255,255	2/2:1,0,21,3:26:255,255,255,44,62,0,255,255,9,255
+chr21	46031087	chr21:46031087:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:31:182,0,201	1/1:3,20:23:255,15,0	0/1:12,13:25:159,0,140
+chr21	46032166	chr21:46032166:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:24:96,0,195	1/1:1,22:24:255,53,0	0/1:18,7:25:52,0,249
+chr21	46043985	chr21:46043985:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:6,4:10:39,0,74	0/0:15,0:16:0,47,255
+chr21	46044147	chr21:46044147:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,10:22:255,171,120,161,0,139	1/2:2,7,8:18:255,111,97,67,0,91	1/2:1,6,8:15:255,123,99,72,0,74
+chr21	46053697	chr21:46053697:M	ACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,13:40:242,0,255	0/1:24,22:48:255,0,255	0/0:32,0:34:0,101,255
+chr21	46068541	chr21:46068541:M	TGTGTGTGTGTGTGTGCATGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,15:16:255,47,0	1/1:0,14:16:255,44,0	1/1:0,14:14:253,41,0
+chr21	46068644	chr21:46068644:M	GTGTGTGTGTGCGTGTGTGTGCGTGTG	<8.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:3,0:3:0,9,136	0/0:4,0:4:0,12,175	0/1:1,7:9:187,0,29
+chr21	46068728	chr21:46068728:M	GTGTGTGTGTG	<4.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,5:20:28,0,198	0/0:9,0:9:0,26,149	0/1:7,8:15:92,0,73
+chr21	46068804	chr21:46068804:M	GTGTGTGTGTGTG	<5.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:22,8:30:68,0,255	0/0:33,0:33:0,97,255	1/1:0,17:17:255,50,0
+chr21	46068849	chr21:46068849:M	TGTGCATGTGTGTGCAAGTCCATGTGTGTGCATGTGCATGTG	<4.3>	.	.	Motif=TGTGCA	GT:AD:DP:PL	0/0:13,0:15:0,20,255	0/0:19,0:19:0,57,255	0/1:0,3:4:87,0,9
+chr21	46068913	chr21:46068913:M	TGTGTGTGTGTGCATGTGTGCCTGGGTGTGTGTGGGTGTGTG	<10>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,9:16:255,0,50	1/1:0,20:21:255,58,0	0/0:5,0:5:0,15,137
+chr21	46069242	chr21:46069242:M	GTGTGTGTGTGCGTGTGTGTGTGCGCATGTGTGTCTGGGTGTGTGCGCGTGTGTGCGTGTGCGTGTGTG	<27.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,3:8:47,0,94	0/0:6,0:6:0,18,145	1/1:0,11:11:255,33,0
+chr21	46070708	chr21:46070708:M	AAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAA	<33>,<34>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,6:17:255,91,61,138,0,142	2/2:0,0,11:11:255,220,192,33,32,0	1/1:3,18,0:21:255,8,0,255,61,255
+chr21	46090107	chr21:46090107:M	TGTTGTTGTTGTTG	<3.7>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:1,6:7:147,0,3	1/1:0,4:4:112,12,0	0/0:17,0:17:0,51,255
+chr21	46090714	chr21:46090714:M	TGGTGATGGTGATGATGATGGCAATGGTGATAATGGTGATGGGGTGATGGTGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTG	<22.5>	.	.	Motif=TGGTGA	GT:AD:DP:PL	1/1:0,3:5:32,4,0	1/1:0,4:8:47,9,0	1/1:0,4:5:51,11,0
+chr21	46090809	chr21:46090809:M	AGTAGTAGTAGT	<45>	.	.	Motif=AGT	GT:AD:DP:PL	0/1:2,3:5:23,0,42	0/1:1,3:4:26,0,17	0/1:1,3:4:26,0,18
+chr21	46090843	chr21:46090843:M	TGATGGTGATGATGATG	<45>	.	.	Motif=TGA	GT:AD:DP:PL	0/1:7,3:10:8,0,164	0/0:10,3:13:0,1,239	0/1:9,3:12:2,0,212
+chr21	46097062	chr21:46097062:M	CAGACACAGACACACACCACACACAGATACACACACCACAGACTCAAACTCAGTCTCAGACACAGACACA	<2.3>	.	.	Motif=CAGACA	GT:AD:DP:PL	0/1:11,34:45:255,0,147	0/1:7,26:33:255,0,80	0/1:11,17:28:255,0,198
+chr21	46097121	chr21:46097121:M	ACACAGACACACACCACACACTCAGATGCACACACCACACACACTCAGTCTCAGACACACACACACACCACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,8:14:255,0,115	0/1:11,8:19:250,0,230	0/1:6,5:11:192,0,124
+chr21	46099890	chr21:46099890:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:4:23,0,23	0/1:1,3:7:36,0,13	0/0:4,0:4:0,12,67
+chr21	46101848	chr21:46101848:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	.	1/1:0,9:10:255,30,0
+chr21	46102707	chr21:46102707:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,48:52:255,134,0	1/1:2,42:46:255,99,0	1/1:0,30:42:255,10,0
+chr21	46116917	chr21:46116917:M	ACACACGCATACACACACACACACACACACACACACACAC	<22>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/2:8,0,4:13:90,113,255,0,207,195	2/2:0,0,7:8:212,212,212,24,24,0	0/1:10,9,0:20:198,0,227,234,255,255
+chr21	46123600	chr21:46123600:M	GATGGATGAATGGATGGATTGCTGGATGAGTGGGTGGGTGGATGGAT	<12.8>	.	.	Motif=GATG	GT:AD:DP:PL	0/1:12,3:15:14,0,184	1/1:0,21:21:255,62,0	0/0:31,0:31:0,91,255
+chr21	46123892	chr21:46123892:M	TGGATAGATGGATGGGTGGGTGGATAGAGGATGGATGG	<4.8>	.	.	Motif=TGGA	GT:AD:DP:PL	0/0:21,0:21:0,63,255	0/0:28,0:28:0,84,255	0/1:3,7:12:167,0,97
+chr21	46123969	chr21:46123969:M	GTGAGTGAGTG	<1.8>	.	.	Motif=GTGA	GT:AD:DP:PL	0/1:17,15:32:195,0,235	1/1:0,36:36:255,106,0	0/0:26,0:26:0,77,255
+chr21	46141304	chr21:46141304:M	TTTTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,12:24:156,0,153	1/1:1,21:23:255,50,0	0/0:34,1:35:0,85,255
+chr21	46141717	chr21:46141717:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:207,0,206	1/1:1,37:40:255,99,0	0/0:40,0:42:0,123,255
+chr21	46147290	chr21:46147290:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:31:255,91,0	1/1:1,30:34:255,81,0	1/1:1,39:41:255,92,0
+chr21	46147943	chr21:46147943:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:17,0,52	0/0:12,0:15:0,40,216	1/1:0,13:13:222,38,0
+chr21	46162591	chr21:46162591:M	TTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:9:230,54,28,108,0,84	1/2:0,1,4:5:128,68,55,18,0,3	1/2:0,5,5:11:255,88,60,89,0,60
+chr21	46164795	chr21:46164795:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:12:56,0,93	0/1:5,11:16:144,0,40	0/0:14,0:17:0,49,255
+chr21	46171429	chr21:46171429:M	AAAAAAAAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,10:25:255,179,214,255,0,255	1/1:0,23,0:25:255,75,0,255,75,255	2/2:0,0,17:19:255,255,255,55,56,0
+chr21	46171940	chr21:46171940:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:13:180,0,74	1/1:0,11:11:255,33,0	0/0:9,1:10:0,4,219
+chr21	46174333	chr21:46174333:M	AAAAAACAAAACAAAAAAAAAAAAAAAA	<20>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:4:82,0,0,85,9,93	1/1:0,3,0:5:119,15,0,119,15,119	0/2:1,0,8:11:109,140,255,0,39,10
+chr21	46179076	chr21:46179076:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:214,0,161	1/1:2,19:25:255,20,0	0/0:19,0:21:0,60,255
+chr21	46184714	chr21:46184714:M	CCACCACCACCACCA	<4>	.	.	Motif=CCA	GT:AD:DP:PL	0/1:22,19:41:115,0,152	0/1:26,20:46:110,0,181	0/1:37,13:50:18,0,255
+chr21	46186838	chr21:46186838:M	TTTGTTTGTTTGATTTCTTTTTTGT	<5.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,25:27:255,71,0	1/1:0,31:34:255,88,0	0/1:8,26:36:255,0,10
+chr21	46198268	chr21:46198268:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:40:255,98,0	1/1:0,31:32:255,94,0	0/1:16,22:40:255,0,171
+chr21	46198830	chr21:46198830:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,4:7:52,69,131,0,30,18	0/2:1,0,2:5:33,34,65,0,5,6	0/1:3,6,2:11:71,0,42,68,10,160
+chr21	46201802	chr21:46201802:M	TTTTTTTTTTTTTT	<11>,<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,14,8:25:255,255,255,113,224,173,231,255,0,255	2/2:0,0,22,0:23:255,255,255,67,66,0,255,255,69,255	1/3:0,21,0,8:30:255,142,158,255,219,255,255,0,255,255
+chr21	46218728	chr21:46218728:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:14:0,41,243	0/1:12,4:16:22,0,158	0/0:24,0:24:0,70,255
+chr21	46221363	chr21:46221363:M	TTTATTTTATT	<2.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,35:35:255,105,0	1/1:0,36:36:255,108,0
+chr21	46226136	chr21:46226136:M	AAAAAAAAAAAAAAAATACAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,4:26:14,0,255	0/0:18,0:19:0,55,255	0/1:7,12:21:170,0,64
+chr21	46227705	chr21:46227705:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:33:0,93,255	0/0:36,0:43:0,113,255	0/1:18,12:32:241,0,255
+chr21	46228807	chr21:46228807:M	CCGCCCAGCCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCC	<7>	.	.	Motif=CCGCC	GT:AD:DP:PL	0/1:3,2:7:35,0,57	1/1:0,5:6:122,15,0	0/1:1,4:6:80,0,8
+chr21	46229190	chr21:46229190:M	GGGCGGGGGCGGGG	<3.3>	.	.	Motif=GGGCGG	GT:AD:DP:PL	0/1:12,3:15:14,0,187	0/0:11,0:11:0,32,200	0/1:6,6:12:77,0,78
+chr21	46232748	chr21:46232748:M	AAAAAACAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,26:54:255,0,255	1/1:0,33:33:255,97,0	0/0:40,0:40:0,118,255
+chr21	46237101	chr21:46237101:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,11:13:188,220,255,20,36,0	2/2:1,0,9:10:136,163,255,12,27,0	1/2:1,8,4:16:191,67,88,147,0,219
+chr21	46242986	chr21:46242986:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:46:0,118,255	0/0:30,1:32:0,77,255	0/1:15,21:36:234,0,136
+chr21	46247124	chr21:46247124:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/0:32,0:33:0,87,255	0/1:18,14:34:165,0,236
+chr21	46248617	chr21:46248617:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:31:0,88,255	0/0:37,1:39:0,97,255	0/1:22,15:40:158,0,255
+chr21	46251882	chr21:46251882:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:6:18,0,41	0/0:2,0:4:0,11,57	1/1:1,6:8:86,3,0
+chr21	46257925	chr21:46257925:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:19:0,55,255	0/0:15,1:17:0,32,248	0/1:5,5:11:64,0,56
+chr21	46258738	chr21:46258738:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:21,26,0:47:255,0,255,255,255,255	1/1:0,51,0:51:255,150,0,255,153,255	0/2:20,0,14:34:255,255,255,0,255,255
+chr21	46259905	chr21:46259905:M	AAAAAAAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,15:25:255,0,145	0/0:8,0:9:0,26,227	0/1:9,18:31:255,0,173
+chr21	46261733	chr21:46261733:M	AAAAAAAAAAAAAAAAAGAAAGAAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,6:13:70,91,250,0,115,81	2/2:0,0,16:16:255,255,255,47,47,0	0/1:11,14,2:27:255,0,232,212,160,255
+chr21	46274939	chr21:46274939:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:28,0,63	0/0:7,1:9:0,10,111	1/1:0,1:4:16,2,0
+chr21	46276741	chr21:46276741:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9,0:26:113,0,204,181,236,255	1/1:0,23,0:25:255,73,0,255,75,255	0/2:9,1,4:14:32,53,217,0,120,132
+chr21	46278165	chr21:46278165:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:38:0,108,255	0/0:41,1:45:0,104,255	0/1:21,30:51:255,0,255
+chr21	46278990	chr21:46278990:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,4:20:19,0,198	0/1:8,4:15:34,0,112	0/0:22,4:29:0,4,255
+chr21	46280813	chr21:46280813:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:37,1:38:0,94,255	0/1:21,14:35:139,0,255
+chr21	46285613	chr21:46285613:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,0:37:0,108,255	0/0:36,0:38:0,111,255	0/1:20,14:34:155,0,255
+chr21	46288016	chr21:46288016:M	AAAAAAAAAAGAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:29:0,85,255	0/0:27,1:29:0,65,255	0/1:20,19:39:235,0,255
+chr21	46288678	chr21:46288678:M	AAAAAGAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:28:0,77,255	0/0:28,0:29:0,84,255	0/1:11,21:33:255,0,202
+chr21	46290211	chr21:46290211:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/0:42,2:44:0,94,255	0/1:28,19:47:212,0,255
+chr21	46291020	chr21:46291020:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:25:0,55,255	0/0:15,1:20:0,27,243	0/1:15,5:20:30,0,208
+chr21	46294759	chr21:46294759:M	AAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,82,0	1/1:0,19:23:255,67,0	1/1:0,35:36:255,108,0
+chr21	46299048	chr21:46299048:M	TTTTTTTTTTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,8:17:255,195,177,87,0,176	2/2:0,1,10:13:255,248,247,15,3,0	1/2:0,3,9:13:255,231,227,37,0,57
+chr21	46301144	chr21:46301144:M	TTTTTATTTTATTTTT	<2.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	1/1:0,33:33:255,91,0	1/1:0,41:41:255,113,0	1/1:0,29:29:255,80,0
+chr21	46302072	chr21:46302072:M	TGGTGGTGGTGGTGGTGGTGGTG	<8.7>	.	.	Motif=TGG	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:29,0:29:0,85,255	0/1:18,11:29:122,0,253
+chr21	46303678	chr21:46303678:M	ACACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,5:14:55,0,15	0/0:11,0:13:0,34,133	1/1:1,4:7:51,8,0
+chr21	46303709	chr21:46303709:M	ATATATATATATATATATATATATATATATATATATAT	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:0,0,3:7:80,57,73,0,18,3	1/2:0,4,3:11:255,54,22,101,0,71	0/0:0,0,0:2:0,3,9,3,9,9
+chr21	46303746	chr21:46303746:M	TTTTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:0,0,0:2:2,4,8,0,3,1	2/2:0,0,3:4:106,80,71,12,9,0	1/2:0,4,2:8:163,46,28,94,0,81
+chr21	46304021	chr21:46304021:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:39,0,5	0/0:1,0:1:0,3,16	1/1:0,4:4:66,12,0
+chr21	46305328	chr21:46305328:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,3,5:12:81,45,138,25,0,99	0/2:5,0,4:9:42,68,187,0,71,59	0/2:6,1,2:9:9,17,122,0,70,95
+chr21	46306070	chr21:46306070:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:104,0,96	0/0:23,1:24:0,53,255	1/1:1,24:26:255,58,0
+chr21	46309462	chr21:46309462:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:24:134,0,133	1/1:1,24:26:255,59,0	0/1:15,4:20:12,0,215
+chr21	46320513	chr21:46320513:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:56,5,0	1/1:0,5:8:183,23,0	0/0:1,0:2:0,4,33
+chr21	46321902	chr21:46321902:M	TTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:11:211,87,92,127,0,118	0/2:1,0,5:9:131,143,194,0,31,8	0/1:1,5,0:10:131,0,26,139,28,178
+chr21	46327386	chr21:46327386:M	TTTTCTTTTTCTTTTTTTTTCTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:35:0,105,255	0/0:35,0:35:0,105,255	0/1:23,11:34:196,0,255
+chr21	46335690	chr21:46335690:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:4,4,9:18:76,66,159,17,0,65	0/1:11,7,0:19:41,0,77,92,100,250	0/2:13,1,8:22:34,82,255,0,108,105
+chr21	46336987	chr21:46336987:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTG	<7>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,36:37:255,108,0	1/1:0,36:36:255,106,0
+chr21	46338605	chr21:46338605:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:1,22:25:255,55,0	1/1:0,14:16:255,46,0
+chr21	46341947	chr21:46341947:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:23:255,49,0	1/1:1,26:28:255,64,0	1/1:2,31:35:255,66,0
+chr21	46353716	chr21:46353716:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,10:22:255,255,255,255,0,255	1/1:0,27,0:28:255,84,0,255,84,255	0/2:8,0,9:20:218,253,255,0,203,158
+chr21	46358598	chr21:46358598:M	TTTTTGTTGTTGTTGTTGTTTTGTTGTTTTGTTTTTTTTTTTTTT	<7.7>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:9,6:16:17,0,33	0/0:16,0:16:0,38,126	1/1:0,10:10:79,24,0
+chr21	46360214	chr21:46360214:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:6,0,34	0/0:8,0:9:0,26,143	0/1:1,4:6:60,0,0
+chr21	46360521	chr21:46360521:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:2,17:21:255,26,0	1/1:1,17:19:255,37,0
+chr21	46367311	chr21:46367311:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:17:0,47,255	0/0:22,0:23:0,67,255	0/1:7,9:17:119,0,75
+chr21	46371215	chr21:46371215:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,20:28:227,25,0	1/1:1,12:15:154,26,0	0/1:9,6:16:37,0,77
+chr21	46373432	chr21:46373432:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:255,30,0	1/1:1,7:11:202,1,0	0/1:2,4:7:96,0,37
+chr21	46374850	chr21:46374850:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	0/1:3,2:6:19,0,35	0/1:5,2:7:14,0,65
+chr21	46381197	chr21:46381197:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,4,2,0:6:161,31,14,62,0,45,134,26,62,124	1/1:0,8,1,0:11:255,33,0,158,16,129,255,30,156,246	2/3:0,2,7,4:13:255,179,149,62,30,24,128,58,0,94
+chr21	46395592	chr21:46395592:M	AATAATAATAAAATA	<6>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:40,10:50:42,0,255	0/1:42,16:58:118,0,255	0/1:46,16:62:115,0,255
+chr21	46398805	chr21:46398805:M	TTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:3,0,58	0/0:6,1:8:0,6,102	0/1:2,4:6:53,0,18
+chr21	46400513	chr21:46400513:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:12,0,12	1/1:0,1:2:17,3,0	0/1:1,3:4:40,0,6
+chr21	46408720	chr21:46408720:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:116,0,63	1/1:0,8:10:157,29,0	0/0:15,0:15:0,44,255
+chr21	46409191	chr21:46409191:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:8:249,24,0	0/1:0,4:7:110,0,5	0/1:6,2:10:25,0,187
+chr21	46413995	chr21:46413995:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,50,0	1/1:0,20:21:255,61,0	0/1:15,11:28:107,0,162
+chr21	46414456	chr21:46414456:M	CCTCCTCCTCCT	<7>	.	.	Motif=CCT	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,5:5:137,15,0	0/0:13,0:13:0,39,255
+chr21	46438670	chr21:46438670:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:13:0,2,163	0/0:10,2:12:0,1,137	0/1:6,7:13:85,0,68
+chr21	46444648	chr21:46444648:M	TTTTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,10:27:255,184,205,255,0,255	1/1:0,20,0:22:255,66,0,255,66,255	1/2:0,10,16:29:255,255,255,255,0,228
+chr21	46449317	chr21:46449317:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:36:0,87,255	0/0:28,1:35:0,74,255	0/1:22,9:34:61,0,255
+chr21	46453744	chr21:46453744:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,6:14:174,93,133,98,0,137	1/1:0,21,0:23:255,67,0,255,69,255	1/2:4,6,6:19:131,53,138,60,0,143
+chr21	46463681	chr21:46463681:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:7,0,12:19:255,199,255,0,117,140	0/0:17,1,0:21:0,42,255,57,255,255	1/2:1,7,8:16:255,116,88,82,0,81
+chr21	46464818	chr21:46464818:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<33>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,1:5:114,16,5,49,0,37	2/2:0,0,4:5:142,88,75,15,14,0	0/0:0,0,0:1:0,0,0,0,0,0
+chr21	46467296	chr21:46467296:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,7:18:137,0,170	1/1:0,3:3:81,9,0	0/1:10,5:16:89,0,225
+chr21	46468262	chr21:46468262:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:27,0,9	0/1:1,3:4:39,0,5	1/1:0,4:5:80,14,0
+chr21	46468413	chr21:46468413:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:33:132,0,155	1/1:0,16:20:255,53,0	0/1:11,9:24:95,0,104
+chr21	46470475	chr21:46470475:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,12:33:123,0,255	0/0:21,0:22:0,64,255	0/1:7,17:25:240,0,52
+chr21	46470764	chr21:46470764:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/0:14,0:15:0,44,251	0/1:13,5:18:36,0,178
+chr21	46476080	chr21:46476080:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,28:32:255,39,0	1/1:0,31:33:255,96,0	1/1:1,25:29:255,66,0
+chr21	46476243	chr21:46476243:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:2,30:33:255,61,0	0/1:20,16:37:185,0,255
+chr21	46476653	chr21:46476653:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:8:181,47,32,91,0,69	2/2:0,0,4:5:71,62,59,12,4,0	0/2:6,0,4:12:41,52,217,0,106,86
+chr21	46477544	chr21:46477544:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,8:14:255,195,177,149,0,125	2/2:0,0,3:3:85,85,85,9,9,0	1/2:0,4,1:6:122,24,10,98,0,95
+chr21	46477741	chr21:46477741:M	TTTTTTTGTTTTGTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,13:13:255,39,0	0/1:10,10:20:213,0,214
+chr21	46480058	chr21:46480058:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13,2:16:255,42,0,253,10,213	2/2:2,2,17:23:255,230,255,27,18,0	0/1:8,6,0:15:135,0,190,113,141,218
+chr21	46485237	chr21:46485237:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:38,1:39:0,96,255	0/0:32,2:34:0,64,255	0/1:16,27:43:255,0,172
+chr21	46492932	chr21:46492932:M	AAAAAAAAAAGGAAGAAAAAAAAAA	<24>,<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,17,10:28:255,255,255,195,196,117,255,255,0,237	3/3:0,0,2,15:18:255,255,255,255,255,241,48,53,17,0	1/2:1,14,18,0:33:255,255,255,236,0,255,255,255,255,255
+chr21	46496071	chr21:46496071:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:33,6,0	1/1:0,1:1:16,3,0	1/1:0,6:6:99,17,0
+chr21	46502303	chr21:46502303:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:34:0,99,255	0/0:36,0:36:0,106,255	0/1:12,18:30:248,0,136
+chr21	46503326	chr21:46503326:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7:10:120,9,0	1/1:0,12:14:225,40,0	0/1:6,5:13:71,0,68
+chr21	46503572	chr21:46503572:M	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<8.8>,<12.8>	.	.	Motif=CTTC	GT:AD:DP:PL	1/2:0,0,1:2:33,21,22,15,0,12	2/2:0,0,3:3:64,71,84,9,9,0	1/1:0,5,0:8:111,15,0,124,15,161
+chr21	46506725	chr21:46506725:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTCTTTCTTCTCTTT	<14.5>,<18>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,10,2:15:255,94,65,255,0,250	2/2:0,0,18:18:255,255,255,54,54,0	1/1:0,8,0:10:218,11,0,222,24,236
+chr21	46506805	chr21:46506805:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:8,2:12:5,0,107	0/1:6,10:17:126,0,65
+chr21	46508043	chr21:46508043:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,7:19:73,0,165	0/0:25,1:27:0,61,255	0/1:18,6:24:37,0,254
+chr21	46508354	chr21:46508354:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	1/1:0,2:3:44,9,0	0/1:3,4:8:47,0,31
+chr21	46510628	chr21:46510628:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,6:8:102,122,210,6,24,0	2/2:0,0,6:8:126,143,206,23,24,0	1/2:1,4,6:13:202,86,157,117,0,113
+chr21	46512801	chr21:46512801:M	AAAAAAAAAAACAAACAAAACAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,18:33:255,0,231	1/1:0,29:37:255,100,0	0/0:46,0:46:0,138,255
+chr21	46514436	chr21:46514436:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:27:0,60,255	0/0:25,0:25:0,73,255	0/1:11,14:25:180,0,126
+chr21	46515453	chr21:46515453:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,85,255	0/0:29,0:30:0,88,255	0/1:26,20:47:224,0,255
+chr21	46523394	chr21:46523394:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,2:7:38,0,122	1/1:0,5:5:138,15,0	0/0:1,0:3:0,6,40
+chr21	46524873	chr21:46524873:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:14:255,37,0	1/1:0,4:4:107,12,0	1/1:0,5:5:146,15,0
+chr21	46525864	chr21:46525864:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>,<15>,<17>	.	.	Motif=ATT	GT:AD:DP:PL	2/3:0,1,14,6:21:255,255,255,159,139,112,255,237,0,255	3/3:0,0,0,5:5:146,146,146,144,144,141,15,15,15,0	1/2:0,8,8,0:16:255,144,98,144,0,98,255,144,144,255
+chr21	46527326	chr21:46527326:M	TTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:145,18,0	1/1:0,8:9:250,27,0	1/1:0,0:2:22,5,0
+chr21	46528528	chr21:46528528:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:142,18,0	1/1:0,3:3:77,9,0	.
+chr21	46529606	chr21:46529606:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,13:31:156,0,220	1/1:0,24:24:255,70,0	0/0:36,1:41:0,99,255
+chr21	46536904	chr21:46536904:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,66,0	1/1:1,19:20:255,41,0	0/1:15,16:32:193,0,185
+chr21	46538371	chr21:46538371:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/1:18,20:38:255,0,236	0/0:24,0:24:0,71,255	0/1:29,15:44:152,0,255
+chr21	46547657	chr21:46547657:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:153,26,0	1/1:0,3:4:60,11,0	0/1:2,0:5:12,0,34
+chr21	46548175	chr21:46548175:M	TGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,12:16:255,0,61	1/1:1,15:16:255,21,0	0/0:20,0:21:0,63,255
+chr21	46569484	chr21:46569484:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,17:30:231,0,122	0/0:23,0:25:0,70,255	0/1:25,17:48:197,0,255
+chr21	46587158	chr21:46587158:M	AAAAACAAAAACAAAAACAA	<2.3>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,53:53:255,156,0	1/1:0,52:52:255,154,0
+chr21	46589944	chr21:46589944:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,19:40:255,0,236	0/0:23,3:27:0,26,255	0/1:17,18:36:233,0,203
+chr21	46599781	chr21:46599781:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:35:255,0,172	0/0:37,0:37:0,109,255	0/1:31,22:53:252,0,255
+chr21	46611501	chr21:46611501:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:3,0:6:0,13,62	1/1:0,3:5:50,9,0
+chr21	46616504	chr21:46616504:M	TGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:13,26:39:255,0,185	0/0:13,1:14:0,19,255	0/1:7,21:28:255,0,78
+chr21	46616522	chr21:46616522:M	TATATATATATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,24:37:255,72,0	0/0:0,0:6:0,6,21	1/1:0,19:27:255,49,0
+chr21	46617772	chr21:46617772:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTAT	<12.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:9,13:23:255,0,190	1/1:0,41:41:255,123,0	0/1:6,19:25:255,0,92
+chr21	46632747	chr21:46632747:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,19:34:252,0,178	0/1:5,28:38:255,0,1	0/1:18,12:31:127,0,245
+chr21	46641124	chr21:46641124:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:9:220,24,0	1/1:0,4:6:111,12,0	1/1:0,11:11:255,33,0
+chr21	46641720	chr21:46641720:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,31:33:255,98,0	1/1:0,30:31:255,93,0	1/1:0,27:28:255,84,0
+chr21	46643476	chr21:46643476:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:16:244,29,0	0/1:2,7:11:94,0,12	0/1:2,6:8:80,0,11
+chr21	46645092	chr21:46645092:M	AAAAAAAAAATTAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10:23:122,0,166	0/0:37,0:37:0,109,255	0/1:21,10:31:94,0,255
+chr21	46645267	chr21:46645267:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,28:43:255,255,255,188,0,82	2/2:4,0,35:39:255,255,255,54,111,0	1/2:0,13,29:43:255,255,255,196,0,77
+chr21	46657377	chr21:46657377:M	AAAAAAAAAAAAAACAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,21:42:255,0,229	0/0:25,0:28:0,81,255	0/1:20,17:38:188,0,251
+chr21	46666304	chr21:46666304:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,16:23:233,0,62	0/0:30,1:31:0,74,255	0/1:6,6:13:82,0,72
+chr21	46668752	chr21:46668752:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,20,20:41:255,255,255,255,0,255	1/1:0,38,0:38:255,114,0,255,112,255	1/2:1,24,26:51:255,255,255,255,0,255
+chr21	46675495	chr21:46675495:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:209,22,0	1/1:0,15:15:255,44,0	1/1:1,17:18:255,35,0
+chr21	46676397	chr21:46676397:M	TTTTTTTTTTTTTCTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,13:25:170,0,116	1/1:0,19:20:255,59,0	0/1:16,10:26:100,0,203
+chr21	46688832	chr21:46688832:M	ACACACACACACACACACACACACACACACACA	<12.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,10:31:255,144,193,255,0,255	1/2:0,30,4:35:255,56,9,255,0,255	1/2:0,29,11:42:255,159,194,255,0,255
+chr21	46699291	chr21:46699291:M	CGCGCCGCGCC	<3.2>	.	.	Motif=CGCGC	GT:AD:DP:PL	0/0:20,0:20:0,56,255	0/0:61,3:64:0,140,255	0/1:1,3:4:28,0,2
diff --git a/trtools/mergeSTR/tests/mydir/test_popstr_outputcurrent b/trtools/mergeSTR/tests/mydir/test_popstr_outputcurrent
new file mode 120000
index 00000000..03e5f46b
--- /dev/null
+++ b/trtools/mergeSTR/tests/mydir/test_popstr_outputcurrent
@@ -0,0 +1 @@
+/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_popstr_output0
\ No newline at end of file

From e2e17616874a739e88ffeafc22f653ba362812b1 Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Thu, 1 Aug 2024 04:10:50 +0000
Subject: [PATCH 10/12] delete tmp  test file

---
 .../mydir/test_AdVNTRRightFile0/test.vcf      |   15 -
 .../tests/mydir/test_AdVNTRRightFilecurrent   |    1 -
 .../test_DifferentContigLengths0/test.vcf     |    0
 .../mydir/test_DifferentContigLengthscurrent  |    1 -
 .../mydir/test_DifferentContigs0/test.vcf     |    0
 .../tests/mydir/test_DifferentContigscurrent  |    1 -
 .../test_ExpansionHunterRightFile0/test.vcf   |   22 -
 .../test_ExpansionHunterRightFilecurrent      |    1 -
 .../tests/mydir/test_FileList0/test.list      |    2 -
 .../mergeSTR/tests/mydir/test_FileListcurrent |    1 -
 .../mydir/test_GangSTRDuplicate0/test.vcf     |   43 -
 .../tests/mydir/test_GangSTRDuplicatecurrent  |    1 -
 .../mydir/test_GangSTRRightFile0/test.vcf     | 2727 ------
 .../tests/mydir/test_GangSTRRightFilecurrent  |    1 -
 .../mydir/test_MissingFieldWarnings0/test.vcf | 2723 ------
 .../mydir/test_MissingFieldWarningscurrent    |    1 -
 .../mydir/test_PopSTRRightFile0/test.vcf      | 8009 -----------------
 .../tests/mydir/test_PopSTRRightFilecurrent   |    1 -
 .../test_RecordChromsNotInContigs0/test.vcf   |   28 -
 .../test_RecordChromsNotInContigscurrent      |    1 -
 .../test_SameContigsDifferentOrder0/test.vcf  |  341 -
 .../test_SameContigsDifferentOrdercurrent     |    1 -
 .../tests/mydir/test_advntr_output0/test.vcf  |   15 -
 .../tests/mydir/test_advntr_outputcurrent     |    1 -
 .../test_alt_same_len_as_ref_diffe0/test.vcf  |  126 -
 .../test_alt_same_len_as_ref_diffecurrent     |    1 -
 .../tests/mydir/test_duplicate_ids0/test.vcf  |   43 -
 .../tests/mydir/test_duplicate_idscurrent     |    1 -
 .../test_eh_mixed_ploidy_no_alt0/test.vcf     |   22 -
 .../mydir/test_eh_mixed_ploidy_no_altcurrent  |    1 -
 .../tests/mydir/test_eh_no_alt0/test.vcf      |   22 -
 .../tests/mydir/test_eh_no_altcurrent         |    1 -
 .../tests/mydir/test_eh_output0/test.vcf      |   22 -
 .../tests/mydir/test_eh_outputcurrent         |    1 -
 .../tests/mydir/test_gangstr_output0/test.vcf | 2727 ------
 .../tests/mydir/test_gangstr_outputcurrent    |    1 -
 .../mydir/test_hipSTRRightFile0/test.vcf      |  126 -
 .../mydir/test_hipSTRRightFile_AP0/test.vcf   | 3435 -------
 .../mydir/test_hipSTRRightFile_APcurrent      |    1 -
 .../tests/mydir/test_hipSTRRightFilecurrent   |    1 -
 .../tests/mydir/test_hipstr_output0/test.vcf  |  126 -
 .../mydir/test_hipstr_output_AP0/test.vcf     | 3435 -------
 .../tests/mydir/test_hipstr_output_APcurrent  |    1 -
 .../test_hipstr_output_flanking_pb0/test.vcf  |  128 -
 .../test_hipstr_output_flanking_pbcurrent     |    1 -
 .../tests/mydir/test_hipstr_outputcurrent     |    1 -
 .../mydir/test_multiple_vcf_typescurrent      |    1 -
 .../tests/mydir/test_popstr_output0/test.vcf  | 8009 -----------------
 .../tests/mydir/test_popstr_outputcurrent     |    1 -
 49 files changed, 32171 deletions(-)
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_AdVNTRRightFilecurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_DifferentContigLengths0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_DifferentContigLengthscurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_DifferentContigs0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_DifferentContigscurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFilecurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_FileList0/test.list
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_FileListcurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_GangSTRDuplicatecurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_GangSTRRightFilecurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_MissingFieldWarningscurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_PopSTRRightFilecurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigscurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrdercurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_advntr_output0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_advntr_outputcurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffecurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_duplicate_ids0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_duplicate_idscurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_altcurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_eh_no_alt0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_eh_no_altcurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_eh_output0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_eh_outputcurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_gangstr_output0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_gangstr_outputcurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0/test.vcf
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_APcurrent
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_hipSTRRightFilecurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_hipstr_output0/test.vcf
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_hipstr_output_APcurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pbcurrent
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_hipstr_outputcurrent
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_multiple_vcf_typescurrent
 delete mode 100644 trtools/mergeSTR/tests/mydir/test_popstr_output0/test.vcf
 delete mode 120000 trtools/mergeSTR/tests/mydir/test_popstr_outputcurrent

diff --git a/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0/test.vcf
deleted file mode 100644
index a755df5c..00000000
--- a/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0/test.vcf
+++ /dev/null
@@ -1,15 +0,0 @@
-##fileformat=VCFv4.1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##source=adVNTR ver. 1.3.3
-##contig=<ID=chr21,length=48129895>
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
-##INFO=<ID=VID,Number=1,Type=Integer,Description="VNTR ID">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
-##INFO=<ID=RC,Number=1,Type=Integer,Description="Reference repeat unit count">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read depth">
-##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Spanning read count">
-##FORMAT=<ID=FR,Number=1,Type=Integer,Description="Flanking read count">
-##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_advntr1:CSTB_2_5_testdata.bam	test_file_advntr2:CSTB_3_5_testdata.bam
-chr21	45196323	.	GCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGG	GCGCGGGGCGGGGCGCGGGGCGGG,GCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGG	.	.	END=45196359;VID=301645;RU=GCGCGGGGCGGG;RC=3	GT:DP:SR:FR:ML	1/2:60:39:21:1.0	0/0:58:37:21:1.0
diff --git a/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFilecurrent
deleted file mode 120000
index 9f87b34d..00000000
--- a/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFilecurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_AdVNTRRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_DifferentContigLengths0/test.vcf b/trtools/mergeSTR/tests/mydir/test_DifferentContigLengths0/test.vcf
deleted file mode 100644
index e69de29b..00000000
diff --git a/trtools/mergeSTR/tests/mydir/test_DifferentContigLengthscurrent b/trtools/mergeSTR/tests/mydir/test_DifferentContigLengthscurrent
deleted file mode 120000
index d8ca0e74..00000000
--- a/trtools/mergeSTR/tests/mydir/test_DifferentContigLengthscurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_DifferentContigLengths0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_DifferentContigs0/test.vcf b/trtools/mergeSTR/tests/mydir/test_DifferentContigs0/test.vcf
deleted file mode 100644
index e69de29b..00000000
diff --git a/trtools/mergeSTR/tests/mydir/test_DifferentContigscurrent b/trtools/mergeSTR/tests/mydir/test_DifferentContigscurrent
deleted file mode 120000
index 2eb1ef4d..00000000
--- a/trtools/mergeSTR/tests/mydir/test_DifferentContigscurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_DifferentContigs0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0/test.vcf
deleted file mode 100644
index a581e141..00000000
--- a/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0/test.vcf
+++ /dev/null
@@ -1,22 +0,0 @@
-##fileformat=VCFv4.1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr4,length=156508116>
-##ALT=<ID=STR18,Description="Allele comprised of 18 repeat units">
-##ALT=<ID=STR16,Description="Allele comprised of 16 repeat units">
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant">
-##INFO=<ID=REF,Number=1,Type=Integer,Description="Reference copy number">
-##INFO=<ID=REPID,Number=1,Type=String,Description="Repeat identifier as specified in the variant catalog">
-##INFO=<ID=RL,Number=1,Type=Integer,Description="Reference length in bp">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat unit in the reference orientation">
-##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
-##INFO=<ID=VARID,Number=1,Type=String,Description="Variant identifier as specified in the variant catalog">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=ADFL,Number=1,Type=String,Description="Number of flanking reads consistent with the allele">
-##FORMAT=<ID=ADIR,Number=1,Type=String,Description="Number of in-repeat reads consistent with the allele">
-##FORMAT=<ID=ADSP,Number=1,Type=String,Description="Number of spanning reads consistent with the allele">
-##FORMAT=<ID=LC,Number=1,Type=Float,Description="Locus coverage">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence interval for REPCN">
-##FORMAT=<ID=REPCN,Number=1,Type=String,Description="Number of repeat units spanned by the allele">
-##FORMAT=<ID=SO,Number=1,Type=String,Description="Type of reads that support the allele; can be SPANNING, FLANKING, or INREPEAT meaning that the reads span, flank, or are fully contained in the repeat">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_eh1:NA12878_S1_HTT	test_file_eh2:NA12822_S1_HTT
-chr4	3076603	.	C	<STR15>,<STR16>,<STR18>	.	.	END=3076660;REF=19;REPID=HTT;RL=57;RU=CAG;VARID=HTT	GT:ADFL:ADIR:ADSP:LC:REPCI:REPCN:SO	2/3:319/320:0/0:4/7:34.624012:16-16/18-18:16/18:SPANNING/SPANNING	1/1:310/322:0/0:3/6:33.46102:15-15/19-19:15/19:SPANNING/SPANNING
diff --git a/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFilecurrent
deleted file mode 120000
index c3e181bb..00000000
--- a/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFilecurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_ExpansionHunterRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_FileList0/test.list b/trtools/mergeSTR/tests/mydir/test_FileList0/test.list
deleted file mode 100644
index e65d21af..00000000
--- a/trtools/mergeSTR/tests/mydir/test_FileList0/test.list
+++ /dev/null
@@ -1,2 +0,0 @@
-/workspaces/TRTools/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/test_file_gangstr1.vcf.gz
-/workspaces/TRTools/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/test_file_gangstr2.vcf.gz
diff --git a/trtools/mergeSTR/tests/mydir/test_FileListcurrent b/trtools/mergeSTR/tests/mydir/test_FileListcurrent
deleted file mode 120000
index 67b5eb42..00000000
--- a/trtools/mergeSTR/tests/mydir/test_FileListcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_FileList0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0/test.vcf b/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0/test.vcf
deleted file mode 100644
index b4cfe0d4..00000000
--- a/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0/test.vcf
+++ /dev/null
@@ -1,43 +0,0 @@
-##fileformat=VCFv4.1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr10,length=130694993>
-##contig=<ID=chr11,length=122082543>
-##contig=<ID=chr12,length=120129022>
-##contig=<ID=chr13,length=120421639>
-##contig=<ID=chr14,length=124902244>
-##contig=<ID=chr15,length=104043685>
-##contig=<ID=chr16,length=98207768>
-##contig=<ID=chr17,length=94987271>
-##contig=<ID=chr18,length=90702639>
-##contig=<ID=chr19,length=61431566>
-##contig=<ID=chr1,length=195471971>
-##contig=<ID=chr2,length=182113224>
-##contig=<ID=chr3,length=160039680>
-##contig=<ID=chr4,length=156508116>
-##contig=<ID=chr5,length=151834684>
-##contig=<ID=chr6,length=149736546>
-##contig=<ID=chr7,length=145441459>
-##contig=<ID=chr8,length=129401213>
-##contig=<ID=chr9,length=124595110>
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
-##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
-##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
-##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
-##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
-##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
-##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
-##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
-##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
-##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
-##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
-##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
diff --git a/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicatecurrent b/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicatecurrent
deleted file mode 120000
index 591e4450..00000000
--- a/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicatecurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_GangSTRDuplicate0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0/test.vcf
deleted file mode 100644
index 82cffd6f..00000000
--- a/trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0/test.vcf
+++ /dev/null
@@ -1,2727 +0,0 @@
-##fileformat=VCFv4.1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0358_BXD40_TyJ_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0358_BXD40_TyJ/res_chr1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr10,length=130694993>
-##contig=<ID=chr11,length=122082543>
-##contig=<ID=chr12,length=120129022>
-##contig=<ID=chr13,length=120421639>
-##contig=<ID=chr14,length=124902244>
-##contig=<ID=chr15,length=104043685>
-##contig=<ID=chr16,length=98207768>
-##contig=<ID=chr17,length=94987271>
-##contig=<ID=chr18,length=90702639>
-##contig=<ID=chr19,length=61431566>
-##contig=<ID=chr1,length=195471971>
-##contig=<ID=chr2,length=182113224>
-##contig=<ID=chr3,length=160039680>
-##contig=<ID=chr4,length=156508116>
-##contig=<ID=chr5,length=151834684>
-##contig=<ID=chr6,length=149736546>
-##contig=<ID=chr7,length=145441459>
-##contig=<ID=chr8,length=129401213>
-##contig=<ID=chr9,length=124595110>
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
-##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
-##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
-##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
-##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
-##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
-##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
-##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
-##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
-##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
-##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
-##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_gangstr1:BXD196_0366	test_file_gangstr2:BXD40_TyJ_0358
-chr1	3004986	.	TCTGTCTGTCTG	.	.	.	END=3004997;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999912:3,3:3-3,3-3:17,12,0,2:3,17:2,2:193.56:366.612,131.36:0.0,0.0:0.0,5.1188e-05,0.999949	0/0:10:0.888534:3,3:3-3,3-3:6,4,0,0:3,6:NULL:61.3218:326.675,113.385:0.0,0.0:4.48253e-20,0.0502949,0.949783
-chr1	3005549	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3005568;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:181.959:366.612,131.36:0.0,0.0:0.0,8.11654e-06,0.999994	0/0:15:0.997039:4,4:4-4,4-4:12,3,0,0:4,12:NULL:73.0332:326.675,113.385:0.0,0.0:1.26878e-38,0.00169958,0.998307
-chr1	3009351	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3009402;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.597778:24,24:22-24,22-24:7,10,0,10:23,2|24,5:5,1|6,2|7,1|8,3|9,1|11,1|12,1:204.961:366.612,131.36:0.647588,0.647588:0.977848,0.0221963,7.63327e-09	0/0:26:0.389735:26,26:24-27,24-27:4,9,0,10:26,4:4,1|5,2|6,1|9,1|12,1|16,1|19,1|22,2:180.81:326.675,113.385:1.00776,1.00776:5.15603e-05,0.319906,0.680058
-chr1	3011925	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATA,TATATATATATATATATATATATATA	.	.	END=3011970;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:24:0.941159:13,13:11-13,11-13:9,12,0,0:13,9:NULL:154.4:366.612,131.36:0.623055,0.623055:1.0,0.0,0.0	1/1:4:0.00116485:4,4:2-7,2-7:0,4,0,0:NULL:NULL:36.0216:326.675,113.385:2.01694,2.01694:0.320181,0.553256,0.12662
-chr1	3013640	.	TTTGTTTGTTTGTTTG	.	.	.	END=3013655;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999747:4,4:3-4,3-4:15,9,0,2:4,15:3,2:152.109:366.612,131.36:0.298675,0.298675:0.0,0.000127996,0.999873	0/0:13:0.976022:4,4:4-4,4-4:9,4,0,0:4,9:NULL:70.0754:326.675,113.385:0.0,0.0:1.01814e-29,0.0139402,0.986089
-chr1	3021480	.	ATGATGATGATG	.	.	.	END=3021491;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999619:4,4:4-4,4-4:15,12,0,0:4,15:NULL:172.657:366.612,131.36:0.0,0.0:0.0,0.000249006,0.999751	0/0:35:1.0:4,4:4-4,4-4:21,14,0,0:4,21:NULL:202.925:326.675,113.385:0.0,0.0:0.0,5.06534e-06,0.999995
-chr1	3029298	.	AGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAG	.	.	END=3029309;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0250924:10,10:1-13,1-13:0,9,0,2:NULL:10,2:102.272:366.612,131.36:4.66296,4.66296:4.77053e-15,0.489352,0.510706	0/0:51:1.0:6,6:6-6,6-6:37,14,0,0:6,37:NULL:279.964:326.675,113.385:0.0,0.0:0.0,6.57464e-11,1.0
-chr1	3030350	.	TTTATTTATTTA	.	.	.	END=3030361;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:18,16,0,2:3,18:2,2:235.97:366.612,131.36:0.0,0.0:0.0,6.94948e-06,0.999994	0/0:29:0.99982:3,3:3-3,3-3:15,11,0,3:3,15:2,3:178.082:326.675,113.385:0.0,0.0:0.0,8.74391e-05,0.999917
-chr1	3034212	.	ATCTATCTATCT	.	.	.	END=3034223;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:216.349:366.612,131.36:0.0,0.0:0.0,7.31421e-06,0.999994	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:295.256:326.675,113.385:0.0,0.0:0.0,1.88135e-07,1.0
-chr1	3045469	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA	.	.	END=3045496;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.219972:21,21:19-21,19-21:3,9,0,2:21,3:14,2:117.372:366.612,131.36:0.822319,0.822319:0.0,0.0,1.0	0/0:61:0.993315:14,14:13-14,13-14:20,21,0,20:13,3|14,17:4,1|5,2|6,2|8,2|9,2|10,3|12,3|13,5:450.41:326.675,113.385:0.21692,0.21692:3.05269e-18,0.00668016,0.993338
-chr1	3050738	.	TATTTATTTATTTATTTATTTATTTATT	TATTTATTTATT	.	.	END=3050765;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0818061:3,3:1-6,1-6:0,12,0,2:NULL:3,2:123.205:366.612,131.36:1.27442,1.27442:1.0,0.0,0.0	0/0:33:0.999981:7,7:7-7,7-7:18,9,0,6:7,18:5,5|6,1:198.876:326.675,113.385:0.0,0.0:0.0,1.1874e-05,0.999987
-chr1	3050955	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3051002;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.569695:19,19:17-20,17-20:15,8,0,8:17,3|18,2|19,10:6,1|7,2|12,1|13,2|16,1|17,1:221.818:366.612,131.36:0.927845,0.927845:1.0,0.0,0.0	0/0:45:0.624164:24,24:23-24,23-24:12,14,0,19:23,4|24,8:5,1|7,2|9,1|11,3|12,1|14,1|16,2|18,3|21,1|22,3|23,1:336.158:326.675,113.385:0.437216,0.437216:1.08153e-07,0.371064,0.628986
-chr1	3051394	.	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	.	.	END=3051533;RU=tttttgg;PERIOD=7;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/4:44:0.271392:17,33:12-22,27-40:0,8,11,24:NULL:3,3|4,2|5,2|6,1|7,1|8,1|9,1|10,1|11,3|12,1|14,1|15,2|16,1|17,4:373.0:366.612,131.36:3.3949,3.70244:0.0,0.99537,0.00464368	1/3:64:0.735437:6,24:5-14,21-31:6,13,7,34:5,2|6,2|11,2:3,6|4,1|5,6|6,3|7,1|8,2|9,3|10,1|12,2|13,2|14,3|15,1|16,3:567.888:326.675,113.385:2.62352,2.31001:0.0,1.0,0.0
-chr1	3062124	.	ATACATACATACATACATACATACATACATACATACATACATAC	.	.	.	END=3062167;RU=atac;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999926:11,11:11-16,11-16:16,17,0,12:11,16:4,2|5,5|6,1|7,1|10,3:309.428:366.612,131.36:1.95404,1.95404:9.34602e-34,3.55638e-05,0.999964	0/0:67:1.0:11,11:11-11,11-11:33,10,0,24:11,33:2,1|3,2|4,5|5,3|7,5|8,2|9,3|10,3:408.226:326.675,113.385:0.0,0.0:0.0,7.09676e-10,1.0
-chr1	3063324	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=3063367;RU=attt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0401205:7,7:7-10,7-10:0,6,0,4:NULL:3,3|4,1:84.8502:366.612,131.36:1.35575,1.35575:0.460155,0.439871,0.100118	0/0:49:0.999985:11,11:3-11,3-11:18,18,0,11:11,18:4,1|5,1|6,1|7,3|8,3|10,2:326.395:326.675,113.385:3.17431,3.17431:3.81225e-40,2.08506e-05,0.999979
-chr1	3068357	.	TGTGTGTGTGTG	TGTGTGTGTG	.	.	END=3068368;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.0:5,5:5-5,5-5:28,14,0,0:5,28:NULL:237.617:366.612,131.36:0.0,0.0:1.0,3.0363e-08,0.0	0/0:56:1.0:6,6:6-6,6-6:34,16,0,4:6,34:5,4:310.554:326.675,113.385:0.0,0.0:0.0,2.88506e-10,1.0
-chr1	3072369	.	TTTATTTATTTA	.	.	.	END=3072380;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999994:3,3:3-3,3-3:19,18,0,0:3,19:NULL:243.124:366.612,131.36:0.0,0.0:0.0,1.2668e-05,0.999987	0/0:55:1.0:3,3:3-3,3-3:38,14,0,3:3,38:2,3:300.933:326.675,113.385:0.0,0.0:0.0,9.70525e-12,1.0
-chr1	3072798	.	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=3072822;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999778:5,5:5-5,5-5:14,17,0,5:5,14:3,3|4,2:248.589:366.612,131.36:0.0,0.0:0.0,0.000141535,0.999858	0/0:57:1.0:5,5:5-5,5-5:24,24,0,9:5,24:3,6|4,3:383.48:326.675,113.385:0.0,0.0:0.0,2.30288e-07,1.0
-chr1	3074617	.	GAAAGAAAGAAA	.	.	.	END=3074628;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:31,7,0,0:3,31:NULL:187.183:366.612,131.36:0.0,0.0:0.0,1.99785e-09,1.0	0/0:56:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:290.927:326.675,113.385:0.0,0.0:0.0,9.75116e-13,1.0
-chr1	3074661	.	CATGCATGCATGCATG	CATGCATGCATGCATGCATG	.	.	END=3074676;RU=catg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999956:5,5:5-5,5-5:18,13,0,0:5,18:NULL:190.145:366.612,131.36:0.0,0.0:0.0,2.90782e-05,0.999972	0/0:45:1.0:4,4:4-4,4-4:34,11,0,0:4,34:NULL:240.772:326.675,113.385:0.0,0.0:0.0,6.64784e-10,1.0
-chr1	3078669	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3078700;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:31:0.0317504:36,36:33-36,33-36:0,9,0,21:NULL:6,2|7,1|12,4|15,1|18,2|19,1|21,1|22,1|25,2|26,1|30,2|31,1|33,2:249.104:366.612,131.36:0.717805,0.717805:0.0,0.0,1.0	0/1:70:0.398947:16,19:16-16,4-19:31,19,0,18:15,4|16,25|17,2:6,2|7,1|8,2|9,4|12,2|13,1|14,3|15,1|18,1|19,1:487.907:326.675,113.385:0.0,5.6364:6.95224e-32,1.39769e-10,1.0
-chr1	3079448	.	TAAATAAATAAA	.	.	.	END=3079459;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.993512:3,3:3-3,3-3:9,19,0,2:3,9:2,1|3,1:217.894:366.612,131.36:0.0,0.0:6.05535e-38,0.00285955,0.997148	0/0:59:1.0:3,3:3-3,3-3:34,25,0,0:3,34:NULL:363.805:326.675,113.385:0.0,0.0:0.0,9.55245e-10,1.0
-chr1	3079495	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=3079545;RU=aag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.313861:24,24:22-25,22-25:2,16,0,8:24,2:8,1|10,1|11,1|15,1|20,2|22,1|24,1:218.24:366.612,131.36:0.736676,0.736676:0.0,0.0,1.0	0/0:64:0.999927:17,17:17-17,17-17:17,25,0,20:17,17:4,1|6,1|7,1|9,1|10,5|11,2|12,2|13,2|14,1|15,1|16,3:456.172:326.675,113.385:0.220506,0.220506:3.04352e-34,3.54294e-05,0.999964
-chr1	3083387	.	TGACTTGACTTGACT	.	.	.	END=3083401;RU=tgact;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,22,0,0:3,23:NULL:298.503:366.612,131.36:0.0,0.0:0.0,7.11885e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:34,13,0,3:3,34:2,3:273.285:326.675,113.385:0.0,0.0:0.0,2.83012e-10,1.0
-chr1	3086726	.	ACCCACCCACCC	.	.	.	END=3086737;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.99608:3,3:3-3,3-3:11,32,0,0:3,11:NULL:333.133:366.612,131.36:0.0,0.0:2.92855e-34,0.00311361,0.996897	0/0:73:0.999993:3,3:3-3,3-3:19,47,0,7:3,19:2,7:542.298:326.675,113.385:0.0,0.0:0.0,1.27627e-05,0.999987
-chr1	3086953	.	AACAACAACAACAAC	AACAACAACAACAACAAC	.	.	END=3086967;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999987:6,6:6-6,6-6:19,24,0,4:6,19:3,1|4,3:327.885:366.612,131.36:0.0,0.0:0.0,1.24015e-05,0.999987	0/0:74:1.0:5,5:5-5,5-5:37,31,0,6:5,37:3,1|4,5:470.789:326.675,113.385:0.0,0.0:0.0,3.12612e-11,1.0
-chr1	3087313	.	GGTTGGTTGGTT	.	.	.	END=3087324;RU=ggtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.267226:3,3:1-3,1-3:2,31,0,0:3,2:NULL:290.32:366.612,131.36:0.697862,0.697862:2.84597e-06,0.590135,0.40994	0/0:44:0.999862:3,3:3-3,3-3:16,28,0,0:3,16:NULL:319.124:326.675,113.385:0.0,0.0:0.0,0.000130932,0.999872
-chr1	3091604	.	GGGTGGGTGGGT	.	.	.	END=3091615;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.930378:3,3:3-3,3-3:7,6,0,0:3,7:NULL:80.4305:366.612,131.36:0.0,0.0:5.49869e-21,0.0321949,0.967864	0/0:50:0.999847:3,3:3-3,3-3:16,34,0,0:3,16:NULL:360.367:326.675,113.385:0.0,0.0:0.0,0.000119209,0.999881
-chr1	3095754	.	TCTCTCTCTCTC	.	.	.	END=3095765;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:6,6:6-6,6-6:25,18,0,0:6,25:NULL:259.181:366.612,131.36:0.0,0.0:0.0,1.55939e-07,1.0	0/0:51:1.0:6,6:6-6,6-6:27,20,0,3:6,27:5,2|6,1:315.128:326.675,113.385:0.139319,0.139319:0.0,2.1589e-08,1.0
-chr1	3095926	.	AAAATAAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAAT	.	.	END=3095945;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.0:5,5:5-5,5-5:28,14,0,3:5,28:2,1|3,1|4,1:267.093:366.612,131.36:0.0,0.0:0.0,1.22478e-08,1.0	0/0:48:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:252.882:326.675,113.385:0.0,0.0:0.0,8.81486e-10,1.0
-chr1	3095965	.	CAAACAAACAAA	.	.	.	END=3095976;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.845777:3,3:3-3,3-3:5,17,0,2:3,5:2,2:186.828:366.612,131.36:0.0,0.0:6.79616e-16,0.074876,0.92522	0/0:55:1.0:3,3:3-3,3-3:33,20,0,2:3,33:2,2:321.64:326.675,113.385:0.0,0.0:0.0,4.6792e-10,1.0
-chr1	3097482	.	TTGTTGTTGTTGTTG	.	.	.	END=3097496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:5,5:5-5,5-5:20,11,0,0:5,20:NULL:182.636:366.612,131.36:0.0,0.0:0.0,6.53813e-06,0.999994	0/0:51:1.0:5,5:5-5,5-5:33,16,0,2:5,33:3,1|4,1:299.39:326.675,113.385:0.0,0.0:0.0,6.26055e-10,1.0
-chr1	3099936	.	GGGTGGGTGGGT	.	.	.	END=3099947;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995606:3,3:3-3,3-3:11,19,0,0:3,11:NULL:210.358:366.612,131.36:0.0,0.0:1.47805e-34,0.00247729,0.997527	0/0:56:0.994187:3,3:3-3,3-3:10,42,0,4:3,10:2,4:444.101:326.675,113.385:0.0,0.0:2.9741e-31,0.00299531,0.997012
-chr1	3105146	.	GGAAGGAAGGAA	GGAAGGAA	.	.	END=3105157;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.101965:2,2:2-3,2-3:0,15,0,2:NULL:2,2:149.768:366.612,131.36:0.390807,0.390807:0.150094,0.489507,0.360547	0/0:45:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:265.389:326.675,113.385:0.139319,0.139319:0.0,7.22832e-08,1.0
-chr1	3116455	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3116512;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.138491:22,22:19-22,19-22:2,7,0,0:22,2:NULL:72.0894:366.612,131.36:1.39572,1.39572:1.0,0.0,0.0	0/0:8:0.0319735:29,29:26-29,26-29:0,5,0,2:NULL:14,1|27,1:63.3289:326.675,113.385:0.775065,0.775065:0.170548,0.491322,0.338258
-chr1	3120976	.	TTGTTGTTGTTG	.	.	.	END=3120987;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:21,21,0,0:4,21:NULL:271.316:366.612,131.36:0.0,0.0:0.0,4.39296e-06,0.999995	0/0:70:1.0:4,4:4-4,4-4:45,22,0,3:4,45:3,3:402.864:326.675,113.385:0.0,0.0:0.0,1.57143e-13,1.0
-chr1	3122158	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3122191;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.385809:19,19:19-20,19-20:4,29,0,3:19,4:7,1|9,1|17,1:298.939:366.612,131.36:0.696174,0.696174:5.99569e-16,0.144868,0.855214	0/0:106:0.999857:17,17:9-17,9-17:48,40,0,17:9,3|16,4|17,39|18,2:5,1|8,1|9,3|10,1|12,2|13,1|14,1|15,6|16,1:767.221:326.675,113.385:3.24656,3.24656:0.0,0.000144555,0.999857
-chr1	3122249	.	CAGACAGACAGA	.	.	.	END=3122260;RU=caga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:37,9,0,0:3,37:NULL:227.276:366.612,131.36:0.0,0.0:0.0,3.83981e-11,1.0	0/0:90:1.0:3,3:3-3,3-3:58,29,0,3:3,58:2,3:515.856:326.675,113.385:0.0,0.0:0.0,7.92967e-18,1.0
-chr1	3125367	.	AACAAACAAACAAACA	AACA	.	.	END=3125382;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0664576:1,1:1-1,1-1:0,15,0,0:NULL:NULL:131.572:366.612,131.36:0.0,0.0:0.296148,0.540177,0.1637	0/0:53:1.0:4,4:4-4,4-4:28,20,0,5:4,28:3,5:327.977:326.675,113.385:0.0,0.0:0.0,1.31461e-08,1.0
-chr1	3125745	.	TTATTATTATTATTA	TTATTATTATTATTATTATTA	.	.	END=3125759;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0303655:7,7:7-10,7-10:0,5,0,0:NULL:NULL:44.1227:366.612,131.36:1.34223,1.34223:0.0,0.0,1.0	0/0:57:1.0:5,5:4-5,4-5:34,16,0,7:4,2|5,32:3,1|4,6:348.986:326.675,113.385:0.169767,0.169767:0.0,1.65507e-06,1.0
-chr1	3130290	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3130337;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:37:0.382746:24,42:24-25,23-42:15,17,0,5:23,4|24,8|25,3:14,1|17,1|19,1|21,1|40,1:291.567:366.612,131.36:0.358902,8.71943:5.58835e-11,0.00100609,0.998998	0/1:74:0.28766:24,33:24-24,23-33:21,19,0,34:22,2|23,5|24,11|25,3:4,1|7,5|9,2|10,3|12,2|13,3|14,1|15,5|16,3|17,2|18,2|20,2|25,1|26,1|31,1:576.311:326.675,113.385:0.0990099,3.5386:1.17544e-25,2.47281e-10,1.0
-chr1	3131093	.	TGACTGACTGAC	.	.	.	END=3131104;RU=tgac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:21,24,0,0:3,21:NULL:299.824:366.612,131.36:0.0,0.0:0.0,4.24596e-06,0.999995	0/0:69:1.0:3,3:3-3,3-3:46,23,0,0:3,46:NULL:387.79:326.675,113.385:0.0,0.0:0.0,1.31898e-13,1.0
-chr1	3132979	.	CTCCCTCCCTCC	.	.	.	END=3132990;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:21,16,0,0:3,21:NULL:232.377:366.612,131.36:0.0,0.0:0.0,4.51274e-06,0.999995	0/0:43:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:246.583:326.675,113.385:0.0,0.0:0.0,6.02507e-09,1.0
-chr1	3134119	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3134160;RU=ttg;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.978038:14,14:13-14,13-14:9,18,0,11:14,9:3,1|4,1|6,2|7,1|8,1|10,1|12,2|13,2:291.17:366.612,131.36:0.390807,0.390807:1.78453e-18,0.0105156,0.989507	0/0:78:1.0:14,14:14-14,14-14:33,20,0,23:14,33:4,1|5,1|6,1|7,5|8,2|9,5|10,1|11,1|12,5|13,1:503.566:326.675,113.385:0.0,0.0:0.0,6.14385e-10,1.0
-chr1	3153384	.	AATAAATAAATA	.	.	.	END=3153395;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:172.88:366.612,131.36:0.0,0.0:0.0,1.09816e-08,1.0	0/0:25:0.99958:3,3:3-3,3-3:14,8,0,3:3,14:2,3:150.528:326.675,113.385:0.0,0.0:1.58e-43,0.000173232,0.999827
-chr1	3161509	.	GGGTGGGTGGGT	.	.	.	END=3161520;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.994566:3,3:3-3,3-3:11,11,0,0:3,11:NULL:145.407:366.612,131.36:0.0,0.0:7.00828e-33,0.00300606,0.997003	0/0:36:0.458435:3,3:2-3,2-3:3,30,0,3:3,3:2,3:309.733:326.675,113.385:0.429525,0.429525:5.10445e-09,0.356641,0.643398
-chr1	3162873	.	TGCTGCTGCTGC	TGCTGCTGCTGCTGCTGC	.	.	END=3162884;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.999286:6,6:6-6,6-6:14,6,0,0:6,14:NULL:113.711:366.612,131.36:0.0,0.0:0.0,0.000160033,0.999842	0/0:43:1.0:4,4:4-4,4-4:30,13,0,0:4,30:NULL:235.308:326.675,113.385:0.0,0.0:0.0,7.52117e-09,1.0
-chr1	3163213	.	ATTCTATTCTATTCT	.	.	.	END=3163227;RU=attct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999547:3,3:3-3,3-3:14,11,0,0:3,14:NULL:153.89:366.612,131.36:0.0,0.0:3e-45,0.000269175,0.999735	0/0:20:0.999735:3,3:3-3,3-3:15,5,0,0:3,15:NULL:107.258:326.675,113.385:0.0,0.0:0.0,0.000138567,0.999864
-chr1	3164426	.	TCTTCCTCTTCCTCTTCC	.	.	.	END=3164443;RU=tcttcc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:247.76:366.612,131.36:0.0,0.0:0.0,8.32048e-07,1.0	0/0:38:0.999874:3,3:3-3,3-3:15,20,0,3:3,15:2,3:272.773:326.675,113.385:0.0,0.0:0.0,0.000119291,0.999881
-chr1	3164472	.	TCATCATCATCATCA	.	.	.	END=3164486;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:31,13,0,0:5,31:NULL:245.878:366.612,131.36:0.0,0.0:0.0,5.79757e-09,1.0	0/0:29:0.999994:5,5:5-5,5-5:19,10,0,0:5,19:NULL:171.622:326.675,113.385:0.0,0.0:0.0,1.43699e-05,0.999986
-chr1	3166251	.	AAACAAACAAAC	.	.	.	END=3166262;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:232.352:366.612,131.36:0.0,0.0:0.0,4.06024e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:185.606:326.675,113.385:0.0,0.0:0.0,1.43407e-06,1.0
-chr1	3169195	.	GTAGTAGTAGTA	.	.	.	END=3169206;RU=gta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:23,12,0,2:4,23:3,2:215.508:366.612,131.36:0.0,0.0:0.0,3.28087e-07,1.0	0/0:28:1.00001:4,4:4-4,4-4:23,5,0,0:4,23:NULL:131.731:326.675,113.385:0.0,0.0:0.0,8.37304e-07,1.0
-chr1	3169225	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=3169258;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.98882:13,13:13-14,13-14:11,15,0,16:13,11:5,1|6,3|7,1|8,2|9,3|10,1|11,1|12,4:311.885:366.612,131.36:0.341835,0.341835:0.998596,0.00140777,2.52175e-40	0/0:29:0.998848:17,17:10-17,10-17:14,6,0,8:17,14:5,1|7,1|8,1|13,2|14,1|16,2:177.981:326.675,113.385:3.49571,3.49571:7.17539e-19,0.000371304,0.999629
-chr1	3169275	.	AATAAATAAATA	.	.	.	END=3169286;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.98337:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.015:366.612,131.36:0.0,0.0:2.11896e-29,0.0105485,0.989476	0/0:22:0.996749:3,3:3-3,3-3:11,8,0,3:3,11:2,3:136.283:326.675,113.385:0.0,0.0:5.49383e-36,0.00126031,0.998746
-chr1	3170541	.	ACAAAACAAAACAAAACAAA	.	.	.	END=3170560;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:23,21,0,2:4,23:2,1|3,1:294.167:366.612,131.36:0.0,0.0:0.0,7.87942e-07,1.0	0/0:49:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:303.202:326.675,113.385:0.0,0.0:0.0,1.04162e-07,1.0
-chr1	3180457	.	GGGTGGGTGGGT	.	.	.	END=3180468;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.927026:3,3:3-3,3-3:7,20,0,0:3,7:NULL:201.976:366.612,131.36:0.0,0.0:2.07325e-21,0.0459557,0.95412	0/0:39:0.998747:3,3:3-3,3-3:13,26,0,0:3,13:NULL:272.37:326.675,113.385:0.0,0.0:5.06635e-39,0.000898473,0.999104
-chr1	3184125	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3184152;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.972076:19,19:19-20,19-20:9,9,0,13:19,9:5,1|6,2|7,2|9,1|11,1|12,1|13,2|15,1|17,2:230.576:366.612,131.36:0.398507,0.398507:0.0,0.0,1.0	0/0:39:0.714594:14,14:13-14,13-14:18,5,0,15:13,5|14,13:5,1|6,2|7,5|8,2|11,3|13,2:253.613:326.675,113.385:0.458235,0.458235:1.65788e-13,0.285296,0.714708
-chr1	3184524	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=3184541;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999765:6,6:6-6,6-6:15,19,0,3:6,15:5,3:255.504:366.612,131.36:0.0,0.0:0.0,0.000105367,0.999895	0/0:43:1.0:6,6:6-6,6-6:23,14,0,5:6,23:3,1|5,4:254.377:326.675,113.385:0.139319,0.139319:0.0,3.86922e-07,1.0
-chr1	3185654	.	AGAGAGAGAGAG	.	.	.	END=3185665;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999571:6,6:6-6,6-6:14,16,0,0:6,14:NULL:206.063:366.612,131.36:0.0,0.0:5.27875e-34,0.000291058,0.999712	0/0:35:1.00001:6,6:6-6,6-6:21,14,0,0:6,21:NULL:210.56:326.675,113.385:0.0,0.0:0.0,2.89898e-06,1.0
-chr1	3188551	.	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	.	.	END=3188606;RU=gcttttt;PERIOD=7;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.98448:7,7:7-7,7-7:9,9,0,4:7,9:5,2|6,1|7,1:146.862:366.612,131.36:0.0,0.0:0.990598,0.00942173,4.03629e-19	0/0:39:0.932444:8,8:8-8,8-8:6,15,0,18:8,6:3,6|4,4|5,2|6,2|7,2|8,2:285.442:326.675,113.385:0.0,0.0:8.04339e-25,0.0264434,0.973607
-chr1	3189480	.	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	END=3189527;RU=tta;PERIOD=3;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.627346:17,17:17-20,17-20:5,14,0,9:17,5:5,1|9,2|10,2|11,3|15,1:227.535:366.612,131.36:1.36051,1.36051:3.08894e-09,0.0980891,0.902012	0/0:32:0.980651:16,16:15-16,15-16:9,11,0,11:16,9:4,1|5,2|8,1|9,1|10,1|12,1|13,1|14,1|15,2:228.914:326.675,113.385:0.36513,0.36513:4.46609e-12,0.00943155,0.990589
-chr1	3190239	.	TTTGTTTGTTTGTTTG	.	.	.	END=3190254;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:21,12,0,5:4,21:3,5:231.473:366.612,131.36:0.0,0.0:0.0,9.58837e-07,1.0	0/0:32:1.0:4,4:4-4,4-4:19,10,0,3:4,19:3,3:194.354:326.675,113.385:0.0,0.0:0.0,4.98852e-06,0.999995
-chr1	3192683	.	GTGTGTGTGTGTGT	.	.	.	END=3192696;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:7,7:7-8,7-8:20,8,0,5:7,20:4,1|5,1|6,3:190.257:366.612,131.36:0.195027,0.195027:3.28507e-39,2.62655e-06,1.0	0/0:31:0.999933:7,7:7-7,7-7:17,10,0,4:7,17:5,3|6,1:188.688:326.675,113.385:0.0,0.0:2.69012e-33,3.3069e-05,0.99997
-chr1	3192934	.	TATATATATATATA	.	.	.	END=3192947;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:7,7:7-7,7-7:24,8,0,0:7,24:NULL:166.924:366.612,131.36:0.0,0.0:7.6252e-41,5.24495e-07,1.0	0/0:31:1.00001:7,7:7-7,7-7:22,8,0,0:7,22:NULL:161.681:326.675,113.385:0.139319,0.139319:1.59678e-37,2.31998e-06,1.0
-chr1	3193519	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3193554;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.896001:25,26:25-26,25-26:5,6,0,5:25,3|26,2:6,1|8,1|14,1|17,1|18,1:130.22:366.612,131.36:0.363246,0.374147:0.0,0.0,1.0	0/3:54:0.357509:18,28:18-22,19-29:6,24,0,20:17,2|18,4:6,2|9,3|10,4|11,2|12,1|14,1|15,1|16,1|17,1|18,2|20,1|28,1:421.12:326.675,113.385:1.11332,3.06777:6.2436e-31,8.09123e-05,0.999919
-chr1	3194182	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194229;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.881189:25,26:25-26,26-26:9,14,0,18:25,4|26,5:6,1|7,1|8,1|10,1|14,4|15,2|16,1|17,1|18,1|19,3|23,1|24,1:322.102:366.612,131.36:0.431574,0.0:4.54279e-23,0.000752893,0.999249	0/3:44:0.309339:24,28:17-25,17-28:3,13,0,24:24,3:5,1|9,1|12,1|13,1|14,3|15,3|17,4|18,2|20,2|21,1|22,1|23,2|24,1|28,1:323.096:326.675,113.385:1.47355,2.81063:2.01499e-19,5.77486e-05,0.999942
-chr1	3194304	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194333;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:44:0.281101:16,36:16-16,16-36:21,11,0,11:15,7|16,14:5,1|6,1|9,1|13,1|14,1|15,1|16,1|19,2|22,1|33,1:312.349:366.612,131.36:0.0,7.03249:0.0,9.98693e-29,1.0	0/3:39:0.303584:15,37:15-16,19-39:15,9,0,15:14,2|15,11|16,2:5,1|8,1|9,1|10,1|11,1|16,3|17,1|18,1|19,1|21,1|22,1|35,1|37,1:292.474:326.675,113.385:0.195027,4.9142:0.0,5.51792e-15,1.0
-chr1	3198131	.	AAAAAACAAAAAACAAAAAAC	AAAAAACAAAAAACAAAAAACAAAAAAC	.	.	END=3198151;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.379613:4,4:3-4,3-4:2,11,0,6:4,2:2,2|3,4:152.071:366.612,131.36:0.469019,0.469019:5.91913e-40,0.0394766,0.960594	0/0:21:0.999434:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.589:326.675,113.385:0.0,0.0:0.0,0.000348704,0.999652
-chr1	3207640	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3207663;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0797823:11,11:6-12,6-12:0,11,0,10:NULL:2,3|3,1|4,1|6,3|9,1|10,1:178.745:366.612,131.36:2.00988,2.00988:4.63405e-39,0.0583273,0.941757	0/0:34:0.985475:6,6:6-6,6-6:9,16,0,9:6,9:3,2|4,3|5,4:247.302:326.675,113.385:0.0,0.0:3.58493e-26,0.0070461,0.992971
-chr1	3209528	.	AAAAACAAAAACAAAAACAAAAAC	.	.	.	END=3209551;RU=aaaaac;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.916764:4,4:1-4,1-4:7,14,0,0:4,7:NULL:163.65:366.612,131.36:0.5093,0.5093:4.93839e-24,0.0720031,0.92809	0/0:35:1.00001:4,4:4-4,4-4:21,10,0,4:4,21:2,1|3,3:203.768:326.675,113.385:0.0,0.0:0.0,1.48659e-06,1.0
-chr1	3209577	.	AACAAAACAAAACAA	.	.	.	END=3209591;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999471:3,3:3-3,3-3:14,10,0,0:3,14:NULL:149.919:366.612,131.36:0.0,0.0:0.0,0.000357457,0.999644	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:195.055:326.675,113.385:0.0,0.0:0.0,3.04889e-07,1.0
-chr1	3212208	.	TATTTATTTATT	.	.	.	END=3212219;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999776:3,3:3-3,3-3:15,22,0,2:3,15:2,2:275.853:366.612,131.36:0.0,0.0:0.0,0.000127184,0.999873	0/0:27:0.999844:3,3:3-3,3-3:16,11,0,0:3,16:NULL:161.29:326.675,113.385:0.0,0.0:0.0,8.8955e-05,0.999911
-chr1	3219276	.	ATTATTATTATTATTATTATTATTATTATTATT	ATTATTATTATTATTATTATTATTATTATT	.	.	END=3219308;RU=att;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.993726:10,10:9-10,9-10:11,8,0,3:10,11:3,1|9,2:143.553:366.612,131.36:0.21692,0.21692:0.996844,0.00316656,1.55989e-15	0/0:13:0.652411:11,11:10-11,10-11:5,7,0,0:11,5:NULL:87.0853:326.675,113.385:0.486863,0.486863:2.85734e-08,0.237372,0.76265
-chr1	3224265	.	AAACAAACAAAC	.	.	.	END=3224276;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.555:366.612,131.36:0.0,0.0:0.0,3.11222e-06,1.0	0/0:31:0.999993:3,3:3-3,3-3:19,12,0,0:3,19:NULL:180.318:326.675,113.385:0.0,0.0:0.0,1.19101e-05,0.999987
-chr1	3229231	.	AACAAAACAAAACAAAACAAAACAA	AACAAAACAAAACAAAACAA	.	.	END=3229255;RU=aacaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.969771:4,4:4-4,4-4:9,9,0,0:4,9:NULL:117.579:366.612,131.36:0.0,0.0:0.990731,0.00929149,1.05996e-22	0/0:30:0.999593:5,5:5-5,5-5:14,8,0,8:5,14:2,1|3,2|4,5:184.138:326.675,113.385:0.0,0.0:1.17395e-36,0.000157612,0.999843
-chr1	3230661	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3230700;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0246166:29,29:18-29,18-29:0,9,0,6:NULL:11,1|12,1|17,1|20,1|22,1|27,1:132.661:366.612,131.36:2.88399,2.88399:3.81652e-23,0.111212,0.888885	1/0:40:0.977378:19,20:17-21,19-21:8,15,0,15:19,4|20,4:4,1|6,1|7,3|8,1|9,1|11,1|12,1|13,1|14,2|16,1|17,1|18,1:301.046:326.675,113.385:0.922547,0.601276:0.000508468,0.979059,0.0204738
-chr1	3247218	.	AAAACAAAACAAAAC	.	.	.	END=3247232;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999292:3,3:3-3,3-3:13,15,0,3:3,13:2,3:213.981:366.612,131.36:0.0,0.0:4.881e-42,0.000339974,0.99966	0/0:24:0.99952:3,3:3-3,3-3:14,8,0,2:3,14:2,2:141.793:326.675,113.385:0.0,0.0:6e-45,0.000223836,0.99978
-chr1	3248425	.	TTGCTTGCTTGCTTGC	.	.	.	END=3248440;RU=ttgc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:32,16,0,2:4,32:2,1|3,1:292.716:366.612,131.36:0.0,0.0:0.0,9.84893e-10,1.0	0/0:42:1.0:4,4:4-4,4-4:28,14,0,0:4,28:NULL:236.422:326.675,113.385:0.0,0.0:0.0,3.28777e-08,1.0
-chr1	3250571	.	ACCACCACCACCACC	ACCACCACCACC	.	.	END=3250585;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.0:4,4:4-4,4-4:21,18,0,0:4,21:NULL:250.656:366.612,131.36:0.0,0.0:1.0,2.14843e-06,0.0	0/0:40:1.0:5,5:4-5,4-5:27,12,0,0:5,27:NULL:215.956:326.675,113.385:0.169767,0.169767:0.0,8.70194e-08,1.0
-chr1	3256241	.	AAACAAACAAAC	.	.	.	END=3256252;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.187:366.612,131.36:0.0,0.0:0.0,1.7126e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:200.029:326.675,113.385:0.0,0.0:0.0,5.2323e-09,1.0
-chr1	3257455	.	GAAGAAGAAGAAGAA	.	.	.	END=3257469;RU=gaa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:23,11,0,3:5,23:4,3:216.8:366.612,131.36:0.0,0.0:0.0,4.39512e-07,1.0	0/0:38:1.0:5,5:5-5,5-5:30,8,0,0:5,30:NULL:194.078:326.675,113.385:0.0,0.0:0.0,1.01573e-08,1.0
-chr1	3263762	.	ACCCACCCACCC	.	.	.	END=3263773;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999996:3,3:3-3,3-3:20,15,0,0:3,20:NULL:218.28:366.612,131.36:0.0,0.0:0.0,1.16154e-05,0.999987	0/0:23:0.99999:3,3:3-3,3-3:18,5,0,0:3,18:NULL:118.308:326.675,113.385:0.0,0.0:0.0,1.72567e-05,0.999986
-chr1	3266661	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3266706;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.859583:16,17:16-18,15-18:6,10,0,5:16,4|17,2:6,1|14,2|15,2:158.259:366.612,131.36:0.702063,0.743564:1.0,0.0,0.0	0/0:42:0.969164:23,23:13-23,13-23:16,11,0,12:22,3|23,13:6,1|12,1|14,2|15,1|16,1|17,1|19,1|20,1|22,3:271.086:326.675,113.385:4.42132,4.42132:2.23068e-12,0.0300615,0.969994
-chr1	3266707	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3266746;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:33:0.271464:20,23:20-23,21-26:3,14,0,15:20,3:6,3|7,3|8,1|10,1|11,1|13,1|15,2|21,2|23,1:261.687:366.612,131.36:0.726627,1.33784:4.26235e-26,2.79685e-05,0.999972	0/1:38:0.307853:20,21:20-20,15-22:11,11,0,13:20,11:5,1|7,1|10,1|14,1|16,1|17,1|18,1|19,5|21,1:255.799:326.675,113.385:0.0,1.50169:6.83388e-24,2.67566e-08,1.0
-chr1	3283714	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=3283733;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998014:5,5:5-5,5-5:13,20,0,3:5,13:2,1|3,2:255.744:366.612,131.36:0.0,0.0:1.99649e-38,0.00152728,0.99848	0/0:36:1.0:5,5:4-5,4-5:19,10,0,6:5,19:2,1|3,1|4,4:218.899:326.675,113.385:0.311527,0.311527:0.0,8.6473e-06,0.999994
-chr1	3284144	.	AACCAACCAACC	.	.	.	END=3284155;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:276.757:366.612,131.36:0.0,0.0:0.0,3.40343e-08,1.0	0/0:22:0.999893:3,3:3-4,3-4:16,5,0,0:3,16:NULL:107.814:326.675,113.385:0.425627,0.425627:0.0,5.48176e-05,0.999948
-chr1	3284442	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3284483;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:47:0.804412:22,23:21-22,21-25:14,13,0,17:21,6|22,8:5,1|6,2|7,1|8,1|9,1|10,1|11,1|12,1|15,1|17,2|18,1|21,2|22,1|23,1:336.16:366.612,131.36:0.484441,1.48323:2.936e-42,1.0899e-08,1.0	0/3:42:0.302197:21,33:21-21,21-33:18,9,0,12:21,18:5,1|13,1|14,1|15,1|17,1|18,1|19,3|20,2|33,1:272.176:326.675,113.385:0.0,6.07264:2.65257e-24,2.95194e-07,1.0
-chr1	3284513	.	TGAATGAATGAATGAATGAATGAA	TGAATGAATGAATGAATGAATGAATGAA	.	.	END=3284536;RU=tgaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:0.999928:6,7:6-7,7-7:29,8,0,0:6,7|7,22:NULL:208.743:366.612,131.36:0.382696,0.0:0.0,2.17331e-12,1.0	0/0:41:1.0:6,6:6-6,6-6:26,10,0,5:6,26:2,1|3,2|5,2:234.8:326.675,113.385:0.0,0.0:0.0,7.37534e-08,1.0
-chr1	3286188	.	CATCATCATCAT	.	.	.	END=3286199;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:28,16,0,3:4,28:3,3:276.88:366.612,131.36:0.0,0.0:0.0,1.38019e-08,1.0	0/0:28:0.999774:4,4:4-4,4-4:15,11,0,2:4,15:3,2:169.069:326.675,113.385:0.0,0.0:0.0,0.000113157,0.999888
-chr1	3287342	.	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC,TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	.	.	END=3287441;RU=tctcc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0428838:8,8:1-8,1-8:0,3,0,3:NULL:7,1|8,2:47.3284:366.612,131.36:1.99367,1.99367:1.0,0.0,0.0	2/2:17:0.0230831:12,12:5-15,5-15:0,6,0,9:NULL:5,2|7,1|9,3|10,1|11,1|12,1:120.258:326.675,113.385:4.65146,4.65146:1.0,0.0,0.0
-chr1	3287445	.	TCCCCCTCCCCCTCCCCCTCCCCC	TCCCCCTCCCCCTCCCCCTCCCCCTCCCCC	.	.	END=3287468;RU=tccccc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.557197:5,5:5-5,5-5:4,2,0,0:5,4:NULL:34.0361:366.612,131.36:0.29703,0.29703:5.92393e-13,0.157841,0.842234	0/0:16:0.937132:4,4:4-4,4-4:8,8,0,0:4,8:NULL:109.373:326.675,113.385:0.29703,0.29703:6.49485e-17,0.047431,0.952645
-chr1	3287528	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=3287583;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:10:0.0290867:7,15:3-14,6-15:0,6,0,2:NULL:4,1|14,1:69.6104:366.612,131.36:3.94079,3.01377:6.41645e-08,0.806418,0.193633	0/0:24:0.869864:14,14:14-15,14-15:6,7,0,10:14,6:2,1|8,3|9,2|10,1|13,3:162.679:326.675,113.385:0.45695,0.45695:3.90143e-11,0.0418628,0.958209
-chr1	3298789	.	AAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	END=3298808;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999963:7,7:7-7,7-7:18,11,0,2:7,18:4,1|5,1:193.51:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:47:1.0:4,4:4-4,4-4:26,18,0,3:4,26:3,3:286.097:326.675,113.385:0.0,0.0:0.0,6.66746e-08,1.0
-chr1	3308941	.	AAAATAAAATAAAATAAAATAAAATAAAAT	AAAAT	.	.	END=3308970;RU=aaaat;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:14:0.959181:6,6:6-6,6-6:8,6,0,0:6,8:NULL:84.4534:326.675,113.385:0.0,0.0:8.40327e-25,0.0235629,0.976482
-chr1	3309296	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCT,TTCTTTCT	.	.	END=3309339;RU=ttct;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:11:0.0507287:1,2:1-2,1-2:0,11,0,0:NULL:NULL:95.391:366.612,131.36:0.499387,0.494455:0.718816,0.268655,0.0125524	0/0:18:0.950048:11,11:11-11,11-11:8,7,0,3:11,8:4,1|7,1|8,1:122.558:326.675,113.385:0.0,0.0:2.46773e-21,0.030773,0.969285
-chr1	3311045	.	AAGAAAAAGAAAAAGAAA	.	.	.	END=3311062;RU=aagaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.983812:3,3:3-3,3-3:9,16,0,0:3,9:NULL:183.474:366.612,131.36:0.0,0.0:2.32816e-26,0.0130668,0.986963	0/0:33:1.00001:3,3:3-3,3-3:22,9,0,2:3,22:2,2:180.68:326.675,113.385:0.0,0.0:0.0,1.03504e-06,1.0
-chr1	3317551	.	TAAATAAATAAA	.	.	.	END=3317562;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.60986:3,3:3-3,3-3:4,7,0,0:3,4:NULL:78.8406:366.612,131.36:0.0,0.0:5.51413e-12,0.183566,0.816501	0/0:8:0.469645:3,3:1-3,1-3:3,5,0,0:3,3:NULL:57.5009:326.675,113.385:0.339533,0.339533:2.24631e-09,0.263676,0.736329
-chr1	3317572	.	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	TA,TATATA	.	.	END=3317629;RU=ta;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.00216521:1,1:1-26,1-26:0,10,0,0:NULL:NULL:89.3505:366.612,131.36:6.01366,6.01366:0.64016,0.333863,0.0260525	2/2:2:0.00090688:3,3:1-3,1-3:0,2,0,0:NULL:NULL:19.0558:326.675,113.385:0.851255,0.851255:0.262426,0.580756,0.156859
-chr1	3317629	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3317664;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0145036:17,17:8-20,8-20:0,7,0,3:NULL:8,1|10,1|17,1:89.8084:366.612,131.36:4.75419,4.75419:0.228232,0.664371,0.107496	0/0:2:0.0227178:18,18:18-18,18-18:0,1,0,0:NULL:NULL:9.12935:326.675,113.385:0.0,0.0:0.187493,0.491102,0.321513
-chr1	3318469	.	TTTTGTTTTGTTTTG	.	.	.	END=3318483;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:2-3,2-3:23,21,0,0:3,23:NULL:290.045:366.612,131.36:0.253975,0.253975:0.0,9.8791e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:233.804:326.675,113.385:0.0,0.0:0.0,1.73051e-07,1.0
-chr1	3319830	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3319850;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999884:7,7:7-7,7-7:17,8,0,0:7,17:NULL:143.581:366.612,131.36:0.0,0.0:6e-45,7.1866e-05,0.999932	0/0:29:0.999541:7,7:7-7,7-7:14,11,0,4:7,14:4,1|5,1|6,2:186.226:326.675,113.385:0.0,0.0:2.56804e-37,0.000211661,0.999789
-chr1	3325716	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3325743;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:15:0.0305249:12,13:1-15,1-15:0,12,0,3:NULL:4,1|7,1|12,1:134.041:366.612,131.36:4.67388,4.71352:0.51569,0.449359,0.0350738	0/0:15:0.659866:14,14:14-14,14-14:5,10,0,0:14,5:NULL:112.97:326.675,113.385:0.29703,0.29703:2.65894e-06,0.2113,0.78875
-chr1	3327145	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3327194;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.453927:21,21:21-22,21-22:3,11,0,10:21,3:4,2|8,1|12,1|13,1|17,1|18,2|20,2:196.883:366.612,131.36:0.294378,0.294378:1.0,0.0,0.0	0/2:36:0.289986:25,28:24-25,23-28:10,8,0,17:23,2|25,8:5,2|7,1|8,1|10,1|12,1|13,1|14,3|15,1|16,1|17,1|21,1|23,1|24,1|28,1:268.127:326.675,113.385:0.240494,2.03792:2.52992e-12,1.94684e-05,0.99998
-chr1	3327251	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=3327290;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.950032:14,14:13-14,13-14:8,11,0,12:14,8:7,3|8,2|9,2|10,2|11,1|12,1|13,1:223.195:366.612,131.36:0.44763,0.44763:0.0,0.0,1.0	0/0:34:1.0:10,10:10-11,10-11:19,6,0,7:10,19:2,1|5,1|9,5:185.78:326.675,113.385:0.270063,0.270063:7.3456e-41,6.86667e-06,0.999994
-chr1	3339592	.	GAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=3339611;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0383828:8,8:8-10,8-10:0,8,0,0:NULL:NULL:75.7368:366.612,131.36:0.957892,0.957892:0.256004,0.503285,0.24073	0/0:23:0.991072:10,10:10-11,10-11:11,8,0,2:10,11:5,1|7,1:134.709:326.675,113.385:0.442343,0.442343:7.4509e-22,0.00419897,0.99581
-chr1	3339980	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=3340011;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999475:9,9:9-9,9-9:14,12,0,11:9,14:3,3|4,1|5,1|6,1|7,1|8,4:249.953:366.612,131.36:0.0,0.0:0.0,2.18235e-05,0.999979	0/0:27:0.999453:8,8:8-8,8-8:14,9,0,4:8,14:5,1|6,1|7,2:163.819:326.675,113.385:0.0,0.0:1.3722e-41,0.000249176,0.999751
-chr1	3340203	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=3340226;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.995765:5,5:5-5,5-5:12,15,0,0:5,12:NULL:185.688:366.612,131.36:0.0,0.0:0.998877,0.00112576,2.65565e-31	0/0:24:0.992594:6,6:6-6,6-6:10,10,0,4:6,10:3,2|5,2:158.865:326.675,113.385:0.0,0.0:2.79459e-24,0.00326886,0.996739
-chr1	3342039	.	CATGCATGCATG	.	.	.	END=3342050;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.75824:3,3:3-3,3-3:5,6,0,0:3,5:NULL:72.7852:366.612,131.36:0.0,0.0:3.67506e-17,0.125749,0.874349	0/0:11:0.955581:3,3:3-3,3-3:8,3,0,0:3,8:NULL:61.7549:326.675,113.385:0.0,0.0:8.05459e-27,0.0209154,0.979125
-chr1	3342663	.	ATAAATAAATAA	.	.	.	END=3342674;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.015:366.612,131.36:0.0,0.0:7.638e-42,1.64445e-06,1.0	0/0:25:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:133.089:326.675,113.385:0.0,0.0:2.13385e-34,2.63915e-05,0.999978
-chr1	3355412	.	ATGTATGTATGT	.	.	.	END=3355423;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:332.388:366.612,131.36:0.0,0.0:0.0,1.13867e-08,1.0	0/0:46:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:278.085:326.675,113.385:0.0,0.0:0.0,6.5236e-08,1.0
-chr1	3357227	.	TTATTTATTTAT	.	.	.	END=3357238;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,13,0,3:3,30:2,3:259.516:366.612,131.36:0.0,0.0:0.0,2.25091e-09,1.0	0/0:29:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.327:326.675,113.385:0.0,0.0:0.0,6.20079e-07,1.0
-chr1	3360114	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3360159;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.156806:26,26:22-26,22-26:2,11,0,9:26,2:4,1|5,1|7,1|11,1|12,1|15,1|18,2|19,1:183.118:366.612,131.36:1.29813,1.29813:1.00743e-06,0.171728,0.828341	0/0:37:0.636893:23,23:21-24,21-24:5,12,0,17:23,5:4,1|7,1|8,1|9,1|10,1|11,1|12,2|14,3|15,1|16,2|19,1|20,1|21,1:271.022:326.675,113.385:0.905494,0.905494:7.81328e-06,0.17981,0.820249
-chr1	3361293	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3361348;RU=ct;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.988165:17,18:15-17,15-18:8,21,0,3:17,5|18,3:5,1|6,1|11,1:254.984:366.612,131.36:0.447192,0.872412:1.0,0.0,0.0	0/0:34:0.931998:28,28:27-29,27-29:8,11,0,13:28,8:5,1|12,2|15,1|16,1|18,1|19,1|21,1|24,3|25,1|27,1:244.907:326.675,113.385:0.48807,0.48807:4.27324e-11,0.032789,0.967271
-chr1	3361348	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3361393;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.332648:30,35:23-30,23-36:4,20,0,16:30,4:7,1|11,1|12,1|14,1|17,1|18,1|19,1|20,3|22,1|24,1|25,1|28,1|31,1|35,1:338.187:366.612,131.36:2.4871,3.85048:0.0,1.165e-10,1.0	0/0:40:0.979008:23,23:20-23,20-23:9,15,0,14:23,9:5,1|6,1|7,1|9,1|10,1|11,1|12,1|13,2|14,2|18,1|22,2:290.388:326.675,113.385:1.18481,1.18481:2.84686e-16,0.0140861,0.985942
-chr1	3365708	.	TTTCTTTCTTTC	TTTC	.	.	END=3365719;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.31096:1,3:1-1,1-6:11,17,0,3:1,11:2,1|3,2:222.859:366.612,131.36:0.0,0.849641:6.25475e-16,1.0,1.7818e-41	0/0:24:0.999884:3,3:3-3,3-3:16,5,0,3:3,16:2,3:132.662:326.675,113.385:0.0,0.0:1.3774e-39,4.05224e-05,0.999963
-chr1	3365944	.	TGTGTGTGTGTG	.	.	.	END=3365955;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999788:6,6:6-6,6-6:15,12,0,4:6,15:5,4:193.16:366.612,131.36:0.0,0.0:5.2e-44,8.18518e-05,0.999918	0/0:35:1.00001:6,6:6-6,6-6:20,13,0,2:6,20:5,2:212.768:326.675,113.385:0.0,0.0:0.0,3.18577e-06,1.0
-chr1	3386948	.	TCTTTCTTTCTT	.	.	.	END=3386959;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.997909:3,3:3-3,3-3:12,17,0,0:3,12:NULL:198.545:366.612,131.36:0.0,0.0:4.33761e-40,0.00135655,0.998648	0/0:28:0.999936:3,3:3-3,3-3:17,11,0,0:3,17:NULL:170.847:326.675,113.385:0.0,0.0:0.0,4.5359e-05,0.999956
-chr1	3388595	.	ACTTCACTTCACTTC	.	.	.	END=3388609;RU=acttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.848:366.612,131.36:0.0,0.0:0.0,1.35613e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:232.247:326.675,113.385:0.0,0.0:0.0,1.93775e-06,1.0
-chr1	3390191	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTC	.	.	END=3390216;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:0.999474:5,13:3-13,13-13:23,9,0,0:3,2|5,3|13,18:NULL:203.98:366.612,131.36:1.7577,0.0:1.83634e-33,1.0,1.91746e-09	0/0:46:0.999873:13,13:12-13,12-13:30,8,0,7:12,4|13,26:5,1|7,1|10,1|11,3|12,1:265.253:326.675,113.385:0.236383,0.236383:7.1e-44,0.00012746,0.999873
-chr1	3393075	.	ACACACACACACAC	.	.	.	END=3393088;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:24,15,0,8:7,24:5,4|6,4:291.55:366.612,131.36:0.0,0.0:0.0,2.26844e-07,1.0	0/0:47:1.0:7,7:7-7,7-7:25,19,0,2:7,25:6,2:296.677:326.675,113.385:0.0990099,0.0990099:0.0,3.55528e-07,1.0
-chr1	3395163	.	AAGAAAGAAAGA	.	.	.	END=3395174;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.847:366.612,131.36:0.0,0.0:0.0,9.82503e-06,0.999993	0/0:35:1.0:3,3:3-3,3-3:18,14,0,3:3,18:2,3:217.461:326.675,113.385:0.0,0.0:0.0,9.75855e-06,0.999993
-chr1	3403481	.	TATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATA	.	.	END=3403498;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.165483:20,20:16-20,16-20:2,9,0,0:20,2:NULL:99.2001:366.612,131.36:1.26066,1.26066:0.0,0.0,1.0	0/0:21:0.956424:9,9:8-9,8-9:9,11,0,0:9,9:NULL:138.289:326.675,113.385:0.21692,0.21692:5.35994e-12,0.0302066,0.969851
-chr1	3403725	.	ACCACCACCACC	.	.	.	END=3403736;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:27,18,0,0:4,27:NULL:262.147:366.612,131.36:0.0,0.0:0.0,9.58616e-08,1.0	0/0:48:1.0:4,4:4-4,4-4:33,15,0,0:4,33:NULL:271.867:326.675,113.385:0.0,0.0:0.0,1.89479e-09,1.0
-chr1	3405593	.	TATTTATTTATT	.	.	.	END=3405604;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:22,15,0,2:3,22:2,2:234.717:366.612,131.36:0.0,0.0:0.0,6.5924e-07,1.0	0/0:23:0.999792:3,3:3-3,3-3:15,6,0,2:3,15:2,2:129.67:326.675,113.385:0.0,0.0:0.0,8.11512e-05,0.999919
-chr1	3405717	.	AACAACAACAAC	.	.	.	END=3405728;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:23,24,0,2:4,23:3,2:320.549:366.612,131.36:0.0,0.0:0.0,4.37449e-07,1.0	0/0:32:0.999896:4,4:4-4,4-4:16,12,0,4:4,16:3,4:203.848:326.675,113.385:0.0,0.0:0.0,5.05573e-05,0.999949
-chr1	3407095	.	AAAATAAAATAAAAT	.	.	.	END=3407109;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:140.173:366.612,131.36:0.0,0.0:0.0,7.06878e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:27,14,0,2:3,27:2,2:251.859:326.675,113.385:0.0,0.0:0.0,3.11129e-08,1.0
-chr1	3408522	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	END=3408561;RU=gaaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.65855:14,14:12-14,12-14:5,16,0,8:14,5:5,2|6,1|7,1|8,1|12,2|13,1:242.678:366.612,131.36:0.581383,0.581383:0.0,0.0,1.0	0/0:41:0.824507:10,10:9-10,9-10:14,19,0,8:9,2|10,12:7,1|8,2|9,5:296.651:326.675,113.385:0.469019,0.469019:6.06932e-23,0.175327,0.824741
-chr1	3408702	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3408745;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.744024:21,21:20-22,20-22:9,10,0,12:20,2|21,7:8,1|9,1|10,2|11,1|12,3|15,1|17,1|18,1|19,1:231.355:366.612,131.36:0.579863,0.579863:0.970769,0.0292858,4.61147e-07	0/0:40:0.99681:22,22:22-23,22-23:13,11,0,15:22,13:4,1|6,1|7,1|8,1|9,3|12,1|14,1|15,2|16,2|19,1|21,1:274.457:326.675,113.385:0.284901,0.284901:2.11754e-16,0.000787401,0.999217
-chr1	3412976	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3413019;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:47:0.266334:24,28:22-25,17-31:9,24,0,12:22,2|24,7:4,1|7,1|10,1|12,1|15,2|17,1|21,1|23,2|25,1|28,1:373.177:366.612,131.36:1.01145,3.92624:1.8091e-41,2.66864e-13,1.0	0/1:36:0.371156:22,24:21-24,21-24:4,17,0,15:21,2|22,2:6,1|7,1|9,1|11,2|12,1|13,1|15,1|16,1|19,1|21,2|22,2|24,1:301.446:326.675,113.385:0.661813,1.29601:9.28366e-23,0.0855846,0.914515
-chr1	3413022	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3413083;RU=tc;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.026846:1,1:1-6,1-6:0,28,0,0:NULL:NULL:246.2:366.612,131.36:1.43779,1.43779:0.994656,0.00535392,5.58523e-07	2/0:30:0.663264:29,31:29-31,30-31:8,16,0,6:29,3|30,2|31,3:5,1|10,1|14,1|23,1|26,1|31,1:243.069:326.675,113.385:0.638134,0.284901:1.47557e-10,0.955712,0.0443579
-chr1	3413143	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=3413186;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.98753:13,13:13-13,13-13:10,20,0,2:13,10:8,1|13,1:243.265:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:28:0.718486:22,22:21-22,21-22:5,13,0,9:22,5:5,1|7,1|11,2|12,1|18,1|19,1|20,1|21,1:216.602:326.675,113.385:0.442564,0.442564:1.43829e-06,0.128759,0.871339
-chr1	3415813	.	TAAATAAATAAA	.	.	.	END=3415824;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999965:3,3:2-3,2-3:18,12,0,0:3,18:NULL:174.415:366.612,131.36:0.431574,0.431574:0.0,3.20106e-05,0.999971	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.329:326.675,113.385:0.0,0.0:0.0,2.02195e-06,1.0
-chr1	3418452	.	ATGTATGTATGT	.	.	.	END=3418463;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:39,18,0,2:3,39:2,2:334.767:366.612,131.36:0.0,0.0:0.0,9.76423e-12,1.0	0/0:27:0.999963:3,3:3-3,3-3:18,9,0,0:3,18:NULL:159.97:326.675,113.385:0.0,0.0:0.0,2.95723e-05,0.999971
-chr1	3419362	.	CCTACCTACCTA	.	.	.	END=3419373;RU=ccta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:35,18,0,3:3,35:2,3:320.414:366.612,131.36:0.0,0.0:0.0,9.58282e-11,1.0	0/0:35:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:168.082:326.675,113.385:0.0,0.0:0.0,9.83807e-09,1.0
-chr1	3427014	.	TATCTATCTATC	.	.	.	END=3427025;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999856:3,3:3-3,3-3:16,23,0,0:3,16:NULL:269.899:366.612,131.36:0.0,0.0:0.0,0.000120938,0.99988	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.991:326.675,113.385:0.0,0.0:0.0,3.03433e-07,1.0
-chr1	3437788	.	AAACAAACAAAC	.	.	.	END=3437799;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,17,0,0:3,37:NULL:298.755:366.612,131.36:0.0,0.0:0.0,8.48512e-11,1.0	0/0:38:1.0:3,3:3-3,3-3:28,8,0,2:3,28:2,2:198.144:326.675,113.385:0.0,0.0:0.0,8.29792e-09,1.0
-chr1	3440889	.	AATAAATAAATA	.	.	.	END=3440900;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:32,10,0,0:3,32:NULL:214.287:366.612,131.36:0.0,0.0:0.0,1.03455e-09,1.0	0/0:25:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:119.376:326.675,113.385:0.0,0.0:0.0,2.36557e-06,1.0
-chr1	3442170	.	CCACCACCACCACCA	CCACCACCACCA	.	.	END=3442184;RU=cca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.188092:4,4:1-4,1-4:2,26,0,0:4,2:NULL:236.847:366.612,131.36:0.944183,0.944183:0.8773,0.122763,3.51555e-05	0/0:26:0.993269:5,5:5-5,5-5:11,15,0,0:5,11:NULL:183.557:326.675,113.385:0.0,0.0:4.64275e-28,0.00515572,0.994858
-chr1	3444468	.	AAGGAAGGAAGGAAGG	.	.	.	END=3444483;RU=aagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:21,22,0,0:4,21:NULL:283.756:366.612,131.36:0.0,0.0:0.0,6.78867e-06,0.999994	0/0:30:1.0:4,4:4-4,4-4:20,10,0,0:4,20:NULL:165.675:326.675,113.385:0.0,0.0:0.0,9.72115e-06,0.999993
-chr1	3452271	.	TTTGTTTGTTTG	.	.	.	END=3452282;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999857:3,3:3-3,3-3:16,14,0,0:3,16:NULL:192.804:366.612,131.36:0.0,0.0:0.0,0.000103879,0.999896	0/0:31:1.0:3,3:3-3,3-3:27,4,0,0:3,27:NULL:140.314:326.675,113.385:0.0,0.0:0.0,3.06181e-08,1.0
-chr1	3452589	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=3452612;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.466473:4,4:1-4,1-4:4,14,0,0:4,4:NULL:151.644:366.612,131.36:0.948533,0.948533:2.53305e-10,0.412736,0.587339	0/0:37:1.0:4,4:3-4,3-4:24,12,0,0:4,24:NULL:204.184:326.675,113.385:0.270063,0.270063:0.0,7.76877e-07,1.0
-chr1	3459217	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	END=3459272;RU=atct;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:1.0:13,13:13-13,13-13:20,22,0,19:13,20:2,1|4,3|5,1|6,2|7,3|9,3|10,1|11,3|12,2:426.507:366.612,131.36:0.0,0.0:1.0,2.32162e-06,3.05588e-32	0/0:67:0.999734:14,14:14-14,14-14:15,29,0,23:14,15:2,2|4,2|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2|13,4:499.709:326.675,113.385:0.0,0.0:2.04347e-33,0.00020263,0.999797
-chr1	3460396	.	GGGACGGGACGGGAC	.	.	.	END=3460410;RU=gggac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.469102:3,3:1-3,1-3:3,8,0,0:3,3:NULL:84.2472:366.612,131.36:0.472766,0.472766:9.34441e-11,0.268776,0.731226	0/0:14:0.990023:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6133:326.675,113.385:0.0,0.0:6.37805e-33,0.00536677,0.994647
-chr1	3462940	.	GTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=3462963;RU=gttt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.997688:10,10:10-10,10-10:12,12,0,8:10,12:2,1|3,2|5,1|6,3|8,1:219.73:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:44:0.999933:6,6:6-6,6-6:16,21,0,7:6,16:3,3|4,1|5,3:303.228:326.675,113.385:0.0,0.0:0.0,4.7846e-05,0.999955
-chr1	3470981	.	CACACACACACACACACACACACA	CA,CACACACACACACA	.	.	END=3471004;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:7:0.00609839:1,7:1-15,1-15:0,7,0,0:NULL:NULL:66.3926:366.612,131.36:4.33019,4.14174:0.229482,0.554589,0.215959	0/0:37:0.997233:12,12:10-12,10-12:12,11,0,12:12,12:6,2|7,1|9,3|10,3|11,3:246.658:326.675,113.385:0.422855,0.422855:8.55909e-17,0.00120403,0.9988
-chr1	3478864	.	ACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=3478881;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.995329:10,10:10-10,10-10:11,13,0,2:10,11:4,1|9,1:180.777:366.612,131.36:0.0,0.0:4.37525e-40,0.0012587,0.998747	0/0:23:0.455559:9,9:8-9,8-9:12,7,0,4:8,2|9,10:6,1|8,3:155.419:326.675,113.385:0.491073,0.491073:7.61899e-16,0.543848,0.456264
-chr1	3481278	.	TTTGTTTGTTTGTTTG	.	.	.	END=3481293;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999981:4,4:4-5,4-5:19,15,0,0:4,19:NULL:218.731:366.612,131.36:0.334882,0.334882:0.0,3.05595e-05,0.999971	0/0:42:1.0:4,4:4-4,4-4:28,8,0,6:4,28:3,6:224.482:326.675,113.385:0.0,0.0:0.0,8.98187e-09,1.0
-chr1	3483580	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3483607;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.919819:19,19:5-20,5-20:18,23,0,8:18,2|19,14|20,2:5,1|6,1|9,1|10,1|14,1|17,2|19,1:371.263:366.612,131.36:6.99379,6.99379:0.0,3.84008e-05,0.999963	0/0:67:0.999998:14,14:14-14,14-14:40,15,0,12:12,3|13,4|14,31|15,2:4,1|5,1|6,4|7,1|8,1|10,1|11,1|13,2:431.313:326.675,113.385:0.19802,0.19802:1.95358e-39,5.81579e-06,0.999995
-chr1	3487177	.	CCATCCATCCAT	.	.	.	END=3487188;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:26,22,0,0:3,26:NULL:300.483:366.612,131.36:0.0,0.0:0.0,8.36725e-08,1.0	0/0:35:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:211.739:326.675,113.385:0.0,0.0:0.0,4.44959e-06,0.999995
-chr1	3487959	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3487988;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.918849:10,12:9-12,12-12:14,17,0,3:9,2|10,3|12,9:8,1|9,1|10,1:257.849:366.612,131.36:1.08161,0.0:1.0,3.86238e-06,1.11061e-21	0/0:33:0.984228:15,15:15-16,15-16:10,16,0,6:15,10:5,1|8,1|12,1|14,2|15,1:242.817:326.675,113.385:0.270063,0.270063:5.38519e-19,0.0034699,0.996541
-chr1	3487988	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATA	.	.	END=3488019;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.758499:10,11:10-14,10-14:4,18,0,0:10,2|11,2:NULL:187.38:366.612,131.36:1.91717,1.5352:0.993196,0.00682201,1.22632e-09	0/0:22:0.944694:16,16:15-17,15-17:9,10,0,0:16,9:NULL:136.375:326.675,113.385:0.4771,0.4771:1.98586e-11,0.0365298,0.963536
-chr1	3490427	.	GCGCGCGCGCGCGC	GCGCGCGCGCGC	.	.	END=3490440;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.0:6,6:6-6,6-6:25,20,0,0:6,25:NULL:282.87:366.612,131.36:0.0990099,0.0990099:1.0,1.37667e-07,2.663e-41	0/0:46:1.0:7,7:7-7,7-7:30,15,0,0:7,30:NULL:258.92:326.675,113.385:0.278639,0.278639:4.9453e-41,1.68511e-08,1.0
-chr1	3491872	.	CACACACACACA	CACACACACA,CACACACACACACACA	.	.	END=3491883;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:18:0.227788:8,8:7-8,7-8:2,15,0,0:8,2:NULL:141.248:366.612,131.36:0.59948,0.59948:2.72633e-08,0.258838,0.741169	1/0:25:0.986961:5,6:5-6,6-6:7,18,0,0:5,2|6,5:NULL:198.102:326.675,113.385:0.452422,0.0:5.90355e-10,0.98821,0.0118178
-chr1	3494930	.	CATTCATTCATTCATTCATTCATT	.	.	.	END=3494953;RU=catt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997386:6,6:6-6,6-6:12,9,0,5:6,12:3,2|4,2|5,1:167.591:366.612,131.36:0.0,0.0:3.95949e-32,0.00131093,0.998694	0/0:47:1.00001:6,6:6-6,6-6:22,15,0,10:6,22:3,4|4,4|5,2:295.517:326.675,113.385:0.0,0.0:0.0,1.17652e-06,1.0
-chr1	3496471	.	TTCTTTTCTTTTCTT	.	.	.	END=3496485;RU=ttctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:260.674:366.612,131.36:0.0,0.0:0.0,5.47066e-07,1.0	0/0:21:0.997268:3,3:1-3,1-3:12,8,0,0:3,12:NULL:120.166:326.675,113.385:0.991682,0.991682:7.039e-42,0.00157585,0.998429
-chr1	3496603	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3496632;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:54:0.283637:22,29:22-22,21-29:15,11,0,25:21,4|22,11:5,1|8,1|9,1|11,1|12,1|13,2|14,1|15,2|16,4|17,4|18,2|19,1|20,2|21,1|27,1:382.349:366.612,131.36:0.0,3.54444:0.0,0.0,1.0	0/0:29:0.984143:15,15:14-16,14-16:16,6,0,6:14,3|15,13:5,1|6,1|9,1|11,2|14,1:177.115:326.675,113.385:0.281439,0.281439:8.76319e-15,0.0152588,0.984773
-chr1	3499569	.	ACCCACCCACCC	ACCCACCCACCCACCCACCC	.	.	END=3499580;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:3:0.00263713:3,5:1-15,1-15:0,3,0,0:NULL:NULL:27.7607:366.612,131.36:5.93652,5.79452:0.00457848,0.154971,0.840537	0/0:18:0.997556:3,3:3-3,3-3:12,6,0,0:3,12:NULL:97.0083:326.675,113.385:0.0,0.0:3.21421e-31,0.00127003,0.998733
-chr1	3507557	.	ACAGACAGACAGACAGACAG	.	.	.	END=3507576;RU=acag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.99109:5,5:4-5,4-5:11,5,0,0:5,11:NULL:87.6499:366.612,131.36:0.437216,0.437216:3.1104e-29,0.00586497,0.99415	0/0:33:0.999946:5,5:5-5,5-5:17,11,0,5:5,17:3,1|4,4:205.65:326.675,113.385:0.0,0.0:1.1e-44,2.35347e-05,0.999979
-chr1	3507759	.	AACAACAACAAC	.	.	.	END=3507770;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999806:4,4:4-4,4-4:16,2,0,0:4,16:NULL:81.2805:366.612,131.36:0.0,0.0:0.0,0.000112515,0.999888	0/0:35:1.0:4,4:4-4,4-4:23,9,0,3:4,23:3,3:195.863:326.675,113.385:0.0,0.0:0.0,3.21403e-07,1.0
-chr1	3509243	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3509290;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:0.901943:24,24:23-25,23-25:20,17,0,15:23,4|24,13|25,3:8,1|11,1|14,2|15,1|17,2|18,1|19,2|21,2|22,1|23,2:377.082:366.612,131.36:0.474835,0.474835:3.69924e-13,0.0100262,0.989998	0/0:35:0.889263:24,24:24-25,24-25:10,11,0,13:23,2|24,8:5,1|7,1|8,1|10,2|13,1|16,1|18,1|19,1|22,1|23,3:253.622:326.675,113.385:0.275098,0.275098:9.72665e-08,0.0958738,0.904227
-chr1	3509605	.	AAACAAAACAAAACA	.	.	.	END=3509619;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999867:3,3:3-3,3-3:16,7,0,0:3,16:NULL:126.671:366.612,131.36:0.0,0.0:0.0,6.98466e-05,0.999933	0/0:19:0.999027:3,3:3-3,3-3:13,6,0,0:3,13:NULL:106.151:326.675,113.385:0.0,0.0:1.49e-43,0.000556877,0.999446
-chr1	3510223	.	AAATAAATAAAT	.	.	.	END=3510234;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:164.508:366.612,131.36:0.0,0.0:0.0,6.1897e-06,0.999995	0/0:28:0.999264:3,3:3-3,3-3:13,12,0,3:3,13:2,3:182.213:326.675,113.385:0.0,0.0:2.11445e-40,0.000337643,0.999666
-chr1	3518996	.	TATTATTATTATTATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTATTATTAT	.	.	END=3519034;RU=tat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.996552:12,12:10-12,10-12:12,10,0,8:12,12:3,1|4,1|7,2|10,3|11,1:200.993:366.612,131.36:0.647134,0.647134:0.998178,0.0018276,7.66627e-17	0/0:27:0.95199:13,13:13-14,13-14:8,10,0,8:13,8:4,1|5,1|6,1|7,1|9,1|11,1|12,2:187.125:326.675,113.385:0.46122,0.46122:2.83563e-14,0.0151482,0.984883
-chr1	3519121	.	ACTCACTCACTC	.	.	.	END=3519132;RU=actc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:219.554:366.612,131.36:0.0,0.0:0.0,7.08751e-07,1.0	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:172.558:326.675,113.385:0.0,0.0:0.0,4.38183e-07,1.0
-chr1	3523067	.	TAATAATAATAATAATAATAATAATAA	TAA	.	.	END=3523093;RU=taa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.039164:1,1:1-5,1-5:0,13,0,0:NULL:NULL:123.852:366.612,131.36:1.14834,1.14834:0.581722,0.376272,0.0421281	0/0:38:0.461444:9,9:9-10,9-10:20,11,0,7:9,17|10,3:5,1|6,1|7,2|8,3:250.211:326.675,113.385:0.499387,0.499387:4.041e-34,3.47245e-06,1.0
-chr1	3527389	.	CATCCATCCATC	.	.	.	END=3527400;RU=catc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:230.582:366.612,131.36:0.0,0.0:0.0,1.79127e-08,1.0	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:317.531:326.675,113.385:0.0,0.0:0.0,1.12177e-10,1.0
-chr1	3529807	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAATAAATAAATAAAT	.	.	END=3529850;RU=aaat;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999979:9,9:9-9,9-9:18,11,0,8:9,18:3,1|4,1|5,1|6,2|8,3:233.364:366.612,131.36:0.0,0.0:0.999993,1.06837e-05,6.47422e-38	0/0:28:0.999428:11,11:11-11,11-11:14,8,0,6:11,14:3,1|5,1|7,1|9,2|10,1:177.812:326.675,113.385:0.0,0.0:4.52009e-32,0.000279724,0.999721
-chr1	3530404	.	TATTATTATTATTATTATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT	.	.	END=3530445;RU=tat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.901029:17,17:17-17,17-17:7,11,0,10:17,7:4,1|7,2|8,1|12,2|13,1|15,2|16,1:203.867:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:42:0.992469:14,14:14-15,14-15:11,18,0,12:14,11:3,2|5,1|6,1|7,3|8,1|11,3|13,1:304.679:326.675,113.385:0.298675,0.298675:2.55207e-16,0.00392428,0.996088
-chr1	3537894	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3537913;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.385014:15,15:13-15,13-15:3,9,0,5:15,3:5,1|7,1|12,2|14,1:137.424:366.612,131.36:0.921165,0.921165:0.0,0.0,1.0	0/0:28:0.975432:10,10:9-11,9-11:15,8,0,4:9,2|10,13:5,1|7,1|8,1|9,1:171.686:326.675,113.385:0.43384,0.43384:2.5878e-18,0.0243184,0.975727
-chr1	3540990	.	TGTTGTTGTTGTTGT	.	.	.	END=3541004;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999861:5,5:5-5,5-5:16,16,0,2:5,16:4,2:226.904:366.612,131.36:0.0,0.0:0.0,7.16376e-05,0.999932	0/0:47:1.0:5,5:5-5,5-5:31,13,0,3:5,31:4,3:261.497:326.675,113.385:0.0,0.0:0.0,1.72273e-09,1.0
-chr1	3541012	.	TTGTTTTTTGTTTTTTGTTTT	TTGTTTTTTGTTTT	.	.	END=3541032;RU=ttgtttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999509:2,2:2-2,2-2:13,13,0,0:2,13:NULL:172.491:366.612,131.36:0.0,0.0:0.999758,0.000244667,2.76786e-40	0/0:40:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:225.609:326.675,113.385:0.0,0.0:0.0,7.44215e-08,1.0
-chr1	3554787	.	GTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGT	.	.	END=3554802;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.999986:9,9:9-9,9-9:18,12,0,7:9,18:6,1|7,2|8,4:237.054:366.612,131.36:0.139319,0.139319:0.0,5.68972e-07,1.0	0/0:49:0.98132:8,8:8-17,8-17:31,13,0,5:8,31:5,1|6,1|7,2|15,1:304.298:326.675,113.385:3.80811,3.80811:0.0,2.92854e-09,1.0
-chr1	3555544	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3555593;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:44:0.362242:21,23:21-21,22-24:8,16,0,19:21,8:5,1|6,1|8,1|10,1|11,1|12,4|13,2|15,3|19,2|22,2|23,1:343.558:366.612,131.36:0.0990099,0.615138:0.636692,0.363356,8.41314e-18	0/3:22:0.260705:25,27:22-25,22-27:2,8,0,10:25,2:8,1|10,2|12,1|13,1|18,1|19,1|22,1|24,1|27,1:166.814:326.675,113.385:1.14218,1.93736:2.32776e-09,0.0255083,0.974539
-chr1	3559181	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=3559216;RU=tc;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.539656:8,8:6-8,6-8:5,17,0,0:8,5:NULL:177.717:366.612,131.36:0.472766,0.472766:1.0,0.0,0.0	0/0:21:0.766734:18,18:16-18,16-18:6,8,0,5:18,6:5,2|12,1|14,1|16,1:138.427:326.675,113.385:0.74567,0.74567:7.06198e-09,0.110577,0.889519
-chr1	3559217	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3559264;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.831844:8,13:8-24,11-24:7,10,0,2:8,3|11,2|13,2:6,1|7,1:146.703:366.612,131.36:6.53897,4.86742:1.0,2.25946e-06,4.52011e-29	0/3:31:0.274637:24,32:24-25,24-33:4,8,0,18:24,4:5,1|7,1|9,2|11,1|12,1|14,3|16,2|19,1|20,2|22,1|23,1|25,1|32,1:237.468:326.675,113.385:0.412766,3.4929:4.38113e-20,9.92807e-07,1.0
-chr1	3559288	.	TCTCTCTCTCTC	.	.	.	END=3559299;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999953:6,6:6-6,6-6:18,12,0,0:6,18:NULL:183.101:366.612,131.36:0.0,0.0:1.7e-44,5.04122e-05,0.999949	0/0:38:0.983739:6,6:6-16,6-16:32,4,0,2:6,32:5,1|14,1:195.327:326.675,113.385:3.76974,3.76974:0.0,1.15641e-09,1.0
-chr1	3560915	.	AAACAAACAAACAAACAAAC	.	.	.	END=3560934;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999839:5,5:5-5,5-5:15,19,0,4:5,15:3,1|4,3:259.872:366.612,131.36:0.0,0.0:0.0,8.33776e-05,0.999918	0/0:39:1.0:5,5:5-5,5-5:23,12,0,4:5,23:4,3|5,1:230.346:326.675,113.385:0.0,0.0:0.0,2.06752e-07,1.0
-chr1	3567195	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3567244;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.815539:25,25:22-25,22-25:9,6,0,9:24,2|25,7:4,1|5,1|10,1|11,2|13,1|16,1|17,1|22,1:170.884:366.612,131.36:1.1105,1.1105:3.3225e-09,0.143123,0.85696	0/1:23:0.573095:25,26:10-25,10-26:6,8,0,7:24,2|25,4:6,1|7,1|8,1|14,1|17,1|21,1|26,1:169.038:326.675,113.385:7.14562,7.63548:2.708e-11,0.0172721,0.982767
-chr1	3568471	.	GATGGATGGATG	.	.	.	END=3568482;RU=gatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999924:3,3:3-3,3-3:16,15,0,2:3,16:2,2:214.124:366.612,131.36:0.0,0.0:0.0,4.05373e-05,0.999963	0/0:34:1.0:3,3:3-3,3-3:25,9,0,0:3,25:NULL:180.427:326.675,113.385:0.0,0.0:0.0,1.92562e-07,1.0
-chr1	3569699	.	GAGGAGGAGGAG	.	.	.	END=3569710;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:23,21,0,0:4,23:NULL:284.952:366.612,131.36:0.0,0.0:0.0,1.6216e-06,1.0	0/0:44:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:247.882:326.675,113.385:0.0990099,0.0990099:0.0,2.60625e-08,1.0
-chr1	3570098	.	CAAAACAAAACAAAA	.	.	.	END=3570112;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:194.924:366.612,131.36:0.0,0.0:0.0,2.27263e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:245.567:326.675,113.385:0.0,0.0:0.0,7.38688e-08,1.0
-chr1	3570893	.	ATATCATATCATATATATCATATCATATATATCATATCATAT	.	.	.	END=3570934;RU=atatcatatcatat;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.984638:3,3:3-3,3-3:10,10,0,0:3,10:NULL:133.018:366.612,131.36:0.0,0.0:1.3946e-12,0.0121244,0.9879	0/0:23:0.994483:3,3:3-3,3-3:11,10,0,2:3,11:2,2:148.089:326.675,113.385:0.0,0.0:7.66727e-14,0.00376926,0.99624
-chr1	3574648	.	CACACACACACACACACACACACA	CACA,CACACACACACACACA	.	.	END=3574671;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.986214:2,8:1-12,3-12:4,32,0,2:2,2|8,2:5,1|7,1:334.309:366.612,131.36:1.82748,2.18962:0.999941,6.0901e-05,4.05663e-13	0/0:48:0.999993:12,12:5-12,5-12:20,21,0,5:12,20:7,1|8,1|9,2|11,1:323.513:326.675,113.385:2.41896,2.41896:2.44051e-28,1.74376e-05,0.999986
-chr1	3575668	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3575713;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.111384:14,22:12-24,22-24:2,20,0,6:22,2:7,2|8,1|9,1|13,1|17,1:240.982:366.612,131.36:5.29045,0.837205:0.887813,0.108392,0.00390201	0/3:60:0.278433:23,28:23-23,22-31:14,24,0,22:22,4|23,10:4,2|5,1|7,2|8,3|9,1|10,1|11,1|12,1|13,3|14,2|15,1|18,1|19,2|28,1:485.687:326.675,113.385:0.0,3.12812:3.576e-14,0.000275774,0.999727
-chr1	3576109	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	ATAGATAGATAGATAG,ATAGATAGATAGATAGATAG	.	.	END=3576152;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.997672:4,5:4-4,4-5:15,21,0,0:4,10|5,5:NULL:273.219:366.612,131.36:0.0,0.390807:1.0,0.0,0.0	0/0:59:1.0:11,11:11-11,11-11:24,18,0,17:11,24:3,4|5,3|6,1|7,1|8,2|9,2|10,4:388.513:326.675,113.385:0.0,0.0:1.17738e-30,7.58134e-07,1.0
-chr1	3576169	.	TAAATAAATAAATAAATAAATAAA	TAAATAAATAAA	.	.	END=3576192;RU=taaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.629186:3,3:3-4,3-4:21,24,0,0:3,19|4,2:NULL:322.466:366.612,131.36:0.491073,0.491073:1.0,1.28293e-06,0.0	0/0:56:1.0:6,6:6-6,6-6:32,18,0,6:6,32:3,2|4,1|5,3:335.677:326.675,113.385:0.0,0.0:0.0,1.09011e-09,1.0
-chr1	3576190	.	AAACAAACAAAC	AAAC	.	.	END=3576201;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0705051:1,1:1-2,1-2:0,20,0,0:NULL:NULL:187.471:366.612,131.36:0.572034,0.572034:0.267009,0.523725,0.209271	0/0:49:1.0:3,3:3-3,3-3:35,14,0,0:3,35:NULL:265.705:326.675,113.385:0.0,0.0:0.0,2.63675e-10,1.0
-chr1	3576505	.	TAGTAGTAGTAGTAGTAGTAGTAGTAG	TAGTAG	.	.	END=3576531;RU=tag;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.325152:2,2:2-8,2-8:3,9,0,0:2,3:NULL:89.3921:366.612,131.36:2.97837,2.97837:0.857414,0.14267,5.98554e-12	0/0:32:1.00001:9,9:9-9,9-9:20,8,0,3:9,20:7,2|8,1:176.424:326.675,113.385:0.139319,0.139319:1.07664e-33,4.93298e-06,0.999995
-chr1	3576606	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=3576674;RU=aga;PERIOD=3;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:18:0.0196081:28,39:12-39,15-40:0,6,0,12:NULL:6,1|8,1|12,4|14,1|18,1|25,2|28,1|37,1:148.215:366.612,131.36:8.12156,7.60409:7.34188e-30,0.228657,0.771374	0/1:30:0.984391:23,24:22-25,23-25:8,12,0,8:23,4|24,4:4,1|10,1|13,1|14,1|15,2|16,1|21,1:207.178:326.675,113.385:0.691512,0.390054:2.67454e-12,0.000776178,0.999226
-chr1	3577214	.	CAATCAATCAAT	.	.	.	END=3577225;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999312:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.142:366.612,131.36:0.0,0.0:0.0,0.000428151,0.999575	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:157.478:326.675,113.385:0.0,0.0:0.0,1.38944e-06,1.0
-chr1	3581254	.	CAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	END=3581273;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.924424:9,9:8-9,8-9:8,8,0,0:9,8:NULL:113.429:366.612,131.36:0.442564,0.442564:0.0,0.0,1.0	0/0:23:0.99584:5,5:5-5,5-5:11,7,0,5:5,11:3,3|4,2:146.225:326.675,113.385:0.0,0.0:2.42381e-38,0.00168218,0.998322
-chr1	3585710	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3585763;RU=ac;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.988159:19,19:19-19,19-19:11,14,0,0:19,11:NULL:180.75:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/2:31:0.294279:27,30:25-27,24-30:6,8,0,15:25,2|27,4:5,1|6,1|11,2|12,1|17,1|19,1|20,2|22,1|23,1|24,2|25,1|30,1:227.254:326.675,113.385:0.839893,2.50693:2.65437e-10,0.000150105,0.99985
-chr1	3588411	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=3588450;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:42:0.404092:18,20:17-18,16-20:14,12,0,16:16,3|17,2|18,9:4,1|5,5|7,1|12,3|13,1|14,2|17,2|20,1:318.935:366.612,131.36:0.275098,1.43157:0.000363908,0.999637,5.75798e-15	2/0:47:0.545097:19,20:18-20,18-20:14,18,0,15:18,3|19,3|20,8:5,1|6,1|7,1|9,1|11,1|13,2|14,3|16,1|17,3|18,1:355.199:326.675,113.385:0.840593,0.339533:7.22038e-07,0.88835,0.111751
-chr1	3589857	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3589900;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.94442:20,20:19-21,19-21:9,10,0,7:20,9:4,1|5,2|7,1|8,2|19,1:191.577:366.612,131.36:0.417958,0.417958:0.984787,0.0152459,6.41648e-11	0/0:35:0.776566:22,22:20-22,20-22:10,10,0,14:21,3|22,7:10,4|12,1|13,1|14,2|15,2|19,3|22,1:252.111:326.675,113.385:0.669325,0.669325:8.57183e-15,0.206472,0.793575
-chr1	3590265	.	ATATATATATATAT	ATATAT	.	.	END=3590278;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999755:3,3:1-3,1-3:15,16,0,0:3,15:NULL:213.737:366.612,131.36:0.851255,0.851255:1.0,0.0,0.0	0/0:32:0.999979:7,7:7-7,7-7:19,12,0,0:7,19:NULL:186.993:326.675,113.385:0.0990099,0.0990099:1.38016e-34,2.74559e-05,0.999972
-chr1	3593993	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3594042;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00116688:2,2:2-12,2-12:0,4,0,0:NULL:NULL:34.3347:366.612,131.36:2.8056,2.8056:0.296546,0.547881,0.155608	0/2:43:0.31823:25,34:24-25,13-34:9,16,0,17:23,2|24,2|25,5:6,2|8,2|9,1|10,1|11,1|17,2|18,1|19,3|24,3|33,1:340.608:326.675,113.385:0.469854,9.1742:2.0047e-08,0.00153837,0.998466
-chr1	3594304	.	TTTGTTTTGTTTTGT	TTTGTTTTGTTTTGTTTTGT	.	.	END=3594318;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999784:4,4:4-4,4-4:15,21,0,5:4,15:2,1|3,4:300.965:366.612,131.36:0.0,0.0:0.0,2.69095e-05,0.999972	0/0:36:0.999996:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.331:326.675,113.385:0.0,0.0:0.0,1.13909e-05,0.999988
-chr1	3595528	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3595547;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999943:6,6:6-6,6-6:17,12,0,6:6,17:2,1|3,2|5,3:219.837:366.612,131.36:0.0,0.0:0.0,7.38434e-06,0.999994	0/0:43:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:3,2|4,4|5,1:263.14:326.675,113.385:0.0,0.0:0.0,2.20549e-07,1.0
-chr1	3597713	.	CCACCCACCCAC	.	.	.	END=3597724;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:26,27,0,0:3,26:NULL:356.282:366.612,131.36:0.0,0.0:0.0,1.9024e-07,1.0	0/0:61:1.0:3,3:3-3,3-3:33,25,0,3:3,33:2,3:380.699:326.675,113.385:0.0,0.0:0.0,3.59453e-10,1.0
-chr1	3598374	.	AGAGAGAGAGAGAG	AG	.	.	END=3598387;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0669496:1,1:1-3,1-3:0,13,0,0:NULL:NULL:121.25:366.612,131.36:0.913899,0.913899:1.0,0.0,0.0	0/0:32:0.999993:7,7:6-7,6-7:19,10,0,2:7,19:4,1|6,1:177.761:326.675,113.385:0.21692,0.21692:0.0,1.1847e-05,0.999987
-chr1	3599536	.	ATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATAT	.	.	END=3599577;RU=at;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.123078:15,15:12-16,12-16:2,6,0,0:15,2:NULL:67.6077:366.612,131.36:1.89137,1.89137:1.0,0.0,0.0	2/2:8:0.155543:20,20:20-22,20-22:2,4,0,0:20,2:NULL:50.4491:326.675,113.385:0.906252,0.906252:0.466256,0.47373,0.060177
-chr1	3599896	.	AAACAAACAAAC	.	.	.	END=3599907;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.998658:3,3:3-4,3-4:13,8,0,0:3,13:NULL:122.393:366.612,131.36:0.46122,0.46122:2.46323e-38,0.000685506,0.999317	0/0:39:1.00001:3,3:3-3,3-3:21,14,0,4:3,21:2,3|3,1:241.059:326.675,113.385:0.0,0.0:0.0,5.51798e-07,1.0
-chr1	3600086	.	ACAAACAAACAAACAAACAA	.	.	.	END=3600105;RU=acaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:5,5:5-5,5-5:20,13,0,6:5,20:4,6:238.826:366.612,131.36:0.0,0.0:0.0,2.78696e-06,1.0	0/0:48:1.0:5,5:5-5,5-5:28,17,0,3:5,28:4,3:294.706:326.675,113.385:0.0,0.0:0.0,9.54704e-09,1.0
-chr1	3608018	.	TTGTTTGTTTGT	.	.	.	END=3608029;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,13,0,5:3,27:2,4|3,1:267.245:366.612,131.36:0.0,0.0:0.0,1.50003e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:36,7,0,0:3,36:NULL:206.438:326.675,113.385:0.0,0.0:0.0,1.14619e-10,1.0
-chr1	3608156	.	TTTGTTTGTTTGTTTG	.	.	.	END=3608171;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:25,15,0,2:4,25:2,1|3,1:249.862:366.612,131.36:0.0,0.0:0.0,3.34792e-07,1.0	0/0:47:1.0:4,4:4-4,4-4:25,16,0,6:4,25:3,6:283.617:326.675,113.385:0.0,0.0:0.0,9.75639e-08,1.0
-chr1	3610003	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3610046;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.646453:23,23:22-24,22-24:14,12,0,16:22,4|23,10:5,1|6,2|7,2|9,2|15,2|16,1|17,2|20,3|22,1:307.269:366.612,131.36:0.451337,0.451337:1.95176e-26,0.000370915,0.99963	0/0:52:0.999485:22,22:22-22,22-22:16,16,0,19:22,16:5,1|6,1|8,1|9,2|10,1|11,2|12,1|13,1|15,1|16,2|17,2|19,2|21,1|22,1:373.435:326.675,113.385:0.0,0.0:9.25308e-26,9.79314e-05,0.999903
-chr1	3612774	.	AAAGAAAGAAAGAAAG	.	.	.	END=3612789;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.210875:4,4:1-4,1-4:2,10,0,0:4,2:NULL:94.1995:366.612,131.36:1.38593,1.38593:2.8758e-07,0.546696,0.453414	0/0:49:1.0:4,4:4-4,4-4:26,19,0,4:4,26:3,4:315.785:326.675,113.385:0.0,0.0:0.0,7.2981e-08,1.0
-chr1	3613442	.	CTGCTGCTGCTG	.	.	.	END=3613453;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.999998:4,4:4-5,4-5:20,30,0,0:4,20:NULL:345.283:366.612,131.36:0.236383,0.236383:0.0,1.51018e-05,0.999986	0/0:54:1.0:4,4:4-4,4-4:37,17,0,0:4,37:NULL:294.658:326.675,113.385:0.0,0.0:0.0,9.79091e-11,1.0
-chr1	3630160	.	AATTAATTAATT	.	.	.	END=3630171;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999879:3,3:3-3,3-3:16,13,0,0:3,16:NULL:181.582:366.612,131.36:0.0,0.0:0.0,8.50016e-05,0.999917	0/0:23:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:109.798:326.675,113.385:0.0,0.0:0.0,8.58725e-06,0.999994
-chr1	3631051	.	ATTAATTAATTA	.	.	.	END=3631062;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998978:3,3:3-3,3-3:15,25,0,0:3,15:NULL:289.134:366.612,131.36:0.0,0.0:0.0,0.000866248,0.999135	0/0:37:1.00001:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.256:326.675,113.385:0.0,0.0:0.0,5.80739e-07,1.0
-chr1	3638662	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=3638693;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.999957:6,6:6-6,6-6:17,25,0,4:6,17:3,2|5,2:331.039:366.612,131.36:0.0,0.0:0.999995,5.32595e-06,0.0	0/0:65:1.0:8,8:8-8,8-8:24,26,0,15:8,24:2,2|3,1|4,3|5,2|6,1|7,6:454.389:326.675,113.385:0.0,0.0:0.0,3.53291e-07,1.0
-chr1	3639042	.	AAGAAAGAAAGA	.	.	.	END=3639053;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,13,0,3:3,25:2,3:236.707:366.612,131.36:0.0,0.0:0.0,5.6034e-08,1.0	0/0:63:1.0:3,3:3-3,3-3:48,15,0,0:3,48:NULL:321.101:326.675,113.385:0.0,0.0:0.0,1.76623e-14,1.0
-chr1	3649526	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3649573;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.837773:21,21:20-21,20-21:6,20,0,16:21,6:5,1|6,1|7,2|12,2|13,2|14,2|15,2|16,1|19,2|20,1:340.528:366.612,131.36:0.298675,0.298675:0.986037,0.0139951,1.83348e-12	0/0:29:0.862321:24,24:23-24,23-24:7,9,0,12:24,7:5,1|6,1|8,1|9,1|10,1|12,1|14,1|15,1|19,3|21,1:206.345:326.675,113.385:0.253975,0.253975:3.65728e-09,0.0713484,0.928746
-chr1	3650739	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=3650782;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.998517:15,15:11-15,11-15:20,10,0,5:14,3|15,17:9,4|10,1:222.223:366.612,131.36:1.16277,1.16277:1.0,0.0,0.0	0/0:60:0.808444:22,22:19-22,19-22:17,13,0,28:21,5|22,12:4,2|5,1|7,1|8,5|9,2|10,3|13,2|14,1|16,2|17,1|18,2|19,1|20,1|21,3|22,1:426.994:326.675,113.385:0.695329,0.695329:1.83475e-18,0.191368,0.808688
-chr1	3651177	.	AAGGAAGGAAGG	.	.	.	END=3651188;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:219.182:366.612,131.36:0.0,0.0:0.0,2.11714e-06,1.0	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.048:326.675,113.385:0.0,0.0:0.0,7.46354e-08,1.0
-chr1	3652162	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3652195;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.916268:17,17:16-17,16-17:16,21,0,5:16,4|17,12:8,1|9,1|12,1|14,2:316.434:366.612,131.36:0.382696,0.382696:1.15124e-12,0.0835824,0.916516	0/0:23:0.752574:17,17:16-17,16-17:11,9,0,3:16,3|17,8:9,2|15,1:160.628:326.675,113.385:0.412766,0.412766:1.17992e-08,0.24142,0.758596
-chr1	3652198	.	ATGTATGTATGT	.	.	.	END=3652209;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:252.979:366.612,131.36:0.0,0.0:0.0,2.25692e-06,1.0	0/0:21:0.999242:3,3:3-3,3-3:14,7,0,0:3,14:NULL:121.301:326.675,113.385:0.0,0.0:1.08e-42,0.000431677,0.999569
-chr1	3652267	.	ATTTATTTATTT	.	.	.	END=3652278;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:221.678:366.612,131.36:0.0,0.0:0.0,5.64366e-06,0.999995	0/0:24:0.999819:3,3:3-3,3-3:16,8,0,0:3,16:NULL:137.147:326.675,113.385:0.0,0.0:0.0,0.000102968,0.999896
-chr1	3653461	.	GTGGGTGGGTGG	.	.	.	END=3653472;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,27,0,0:3,29:NULL:360.913:366.612,131.36:0.0,0.0:0.0,5.32789e-08,1.0	0/0:25:0.999931:3,3:3-3,3-3:17,8,0,0:3,17:NULL:136.47:326.675,113.385:0.0,0.0:0.0,3.93278e-05,0.999963
-chr1	3655005	.	ATAAATAAATAAATAAATAAATAA	.	.	.	END=3655028;RU=ataa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999914:6,6:6-6,6-6:17,11,0,0:6,17:NULL:169.944:366.612,131.36:0.0,0.0:0.0,6.7504e-05,0.999933	0/0:22:0.999:6,6:6-6,6-6:13,7,0,2:6,13:5,2:129.011:326.675,113.385:0.0,0.0:8.21165e-40,0.000428176,0.999575
-chr1	3658217	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3658262;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.402513:28,28:27-28,27-28:6,11,0,12:27,2|28,4:6,3|9,1|10,1|17,1|18,1|22,1|23,1|24,2|27,1:222.141:366.612,131.36:0.478946,0.478946:0.0,0.0,1.0	0/0:35:0.928376:23,23:21-24,21-24:11,8,0,14:22,2|23,9:5,1|8,1|10,2|14,2|16,1|19,2|20,2|22,3:236.441:326.675,113.385:0.507951,0.507951:9.4495e-09,0.0600128,0.940076
-chr1	3658997	.	TAAAATAAAATAAAA	.	.	.	END=3659011;RU=taaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:243.445:366.612,131.36:0.0,0.0:0.0,2.70447e-07,1.0	0/0:31:0.993071:3,3:3-3,3-3:10,19,0,2:3,10:2,2:238.715:326.675,113.385:0.0,0.0:7.02703e-33,0.00430459,0.995704
-chr1	3659687	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3659732;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.525084:21,21:17-23,17-23:16,12,0,14:19,2|20,4|21,10:8,4|9,1|10,2|12,1|13,2|14,2|16,1|19,1:310.77:366.612,131.36:0.992275,0.992275:0.999879,0.000123886,3.17682e-17	0/0:50:0.973781:23,23:14-23,14-23:10,17,0,20:23,10:4,1|5,1|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,2|18,1|20,1|21,1:361.452:326.675,113.385:4.1361,4.1361:2.24582e-11,0.0119948,0.988032
-chr1	3660735	.	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=3660759;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.998797:5,5:5-5,5-5:12,21,0,9:5,12:3,6|4,2|5,1:312.548:366.612,131.36:0.0,0.0:0.0,0.000756779,0.999248	0/0:35:1.0:5,5:5-5,5-5:23,7,0,5:5,23:3,1|4,4:194.246:326.675,113.385:0.0,0.0:0.0,3.25399e-07,1.0
-chr1	3661144	.	TGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG	.	.	END=3661161;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:1.0:11,11:11-11,11-11:36,20,0,7:10,3|11,33:4,1|5,2|6,1|7,1|9,1|10,1:390.389:366.612,131.36:0.0,0.0:0.0,4.32167e-11,1.0	0/0:37:1.0:9,9:9-9,9-9:20,11,0,4:9,20:5,1|6,1|8,1|9,1:215.734:326.675,113.385:0.0,0.0:1.8807e-38,4.27597e-06,0.999995
-chr1	3667713	.	AACAAACAAACA	.	.	.	END=3667724;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:231.239:366.612,131.36:0.0,0.0:0.0,4.28522e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:192.588:326.675,113.385:0.0,0.0:0.0,4.54549e-06,0.999995
-chr1	3671145	.	GCAGCAGCAGCAGCA	.	.	.	END=3671159;RU=gca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:5,5:5-5,5-5:33,28,0,0:4,2|5,31:NULL:397.821:366.612,131.36:0.0990099,0.0990099:0.0,8.92102e-07,1.0	0/0:41:1.0:5,5:5-5,5-5:21,18,0,2:5,21:3,1|4,1:268.021:326.675,113.385:0.0,0.0:0.0,4.46015e-06,0.999995
-chr1	3671658	.	GCCGCCGCCGCCGCC	.	.	.	END=3671672;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:23,21,0,0:5,23:NULL:285.729:366.612,131.36:0.0,0.0:0.0,1.51329e-06,1.0	0/0:80:1.0:5,5:5-5,5-5:45,33,0,2:5,45:4,2:511.722:326.675,113.385:0.0,0.0:0.0,2.72444e-13,1.0
-chr1	3672852	.	CACCACCACCAC	CAC	.	.	END=3672863;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0545822:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.243:366.612,131.36:0.623212,0.623212:0.349383,0.488596,0.162064	0/0:6:0.242123:4,4:1-4,1-4:2,4,0,0:4,2:NULL:41.7069:326.675,113.385:0.857222,0.857222:4.36802e-06,0.405199,0.59487
-chr1	3673065	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	END=3673124;RU=cttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.48575:18,18:17-18,17-18:3,10,0,6:18,3:2,1|5,1|7,1|8,1|12,1|17,1:156.234:366.612,131.36:0.478946,0.478946:2.14036e-22,0.0868164,0.91328	0/0:20:0.66215:15,15:13-15,13-15:5,10,0,5:15,5:3,1|5,1|7,1|10,1|13,1:152.866:326.675,113.385:0.404368,0.404368:4.1154e-10,0.210486,0.789562
-chr1	3673125	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3673174;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.109:18,18:15-19,15-19:2,10,0,0:18,2:NULL:106.067:366.612,131.36:1.60555,1.60555:1.0,0.0,0.0	2/2:20:0.0214122:24,24:23-26,23-26:0,10,0,6:NULL:5,1|6,1|12,1|16,1|21,1|24,1:143.116:326.675,113.385:1.0234,1.0234:0.120437,0.554704,0.325002
-chr1	3677305	.	AGAGAGAGAGAG	.	.	.	END=3677316;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:6,6:6-6,6-6:23,20,0,0:6,23:NULL:282.976:366.612,131.36:0.0,0.0:0.0,1.29706e-06,1.0	0/0:36:1.0:6,6:6-6,6-6:24,10,0,2:6,24:5,2:207.0:326.675,113.385:0.0,0.0:0.0,1.97072e-07,1.0
-chr1	3679100	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=3679119;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999952:4,4:4-4,4-4:17,14,0,3:4,17:2,1|3,2:216.889:366.612,131.36:0.0,0.0:0.999971,3.05182e-05,8.95878e-40	0/0:36:1.0:5,5:5-5,5-5:26,7,0,3:5,26:4,3:191.379:326.675,113.385:0.0,0.0:0.0,4.85084e-08,1.0
-chr1	3680409	.	TTTTGTTTTGTTTTG	.	.	.	END=3680423;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999047:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.587:366.612,131.36:0.0,0.0:2.2255e-41,0.000601739,0.999401	0/0:39:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:227.682:326.675,113.385:0.0,0.0:0.0,2.28936e-07,1.0
-chr1	3681094	.	TCTATCTATCTA	.	.	.	END=3681105;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999866:3,3:3-3,3-3:16,8,0,0:3,16:NULL:135.989:366.612,131.36:0.0,0.0:0.0,8.57214e-05,0.999917	0/0:48:1.0:3,3:3-3,3-3:32,13,0,3:3,32:2,3:264.039:326.675,113.385:0.0,0.0:0.0,8.76106e-10,1.0
-chr1	3686501	.	TATATATATATATATATATATATATATATATATATATA	TA	.	.	END=3686538;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0184747:1,1:1-4,1-4:0,23,0,0:NULL:NULL:207.554:366.612,131.36:0.993953,0.993953:0.873247,0.124515,0.00234243	0/0:13:0.782299:19,19:19-19,19-19:6,7,0,0:19,6:NULL:88.745:326.675,113.385:0.417958,0.417958:3.40388e-08,0.123674,0.876425
-chr1	3688514	.	AAACAAACAAACAAAC	.	.	.	END=3688529;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999971:4,4:4-4,4-4:17,13,0,2:4,17:3,2:208.339:366.612,131.36:0.0,0.0:0.0,2.13281e-05,0.999979	0/0:29:0.999821:4,4:4-4,4-4:17,12,0,0:4,17:NULL:183.456:326.675,113.385:0.0,0.0:0.0,0.00014699,0.999856
-chr1	3689585	.	GTGGGTGGGTGGGTGG	.	.	.	END=3689600;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.846048:4,4:2-4,2-4:6,25,0,2:4,6:2,1|3,1:254.143:366.612,131.36:0.485452,0.485452:1.57694e-16,0.0988066,0.901298	0/0:40:0.980853:4,4:4-4,4-4:9,28,0,3:4,9:3,3:307.763:326.675,113.385:0.0,0.0:1.30993e-24,0.0128877,0.987141
-chr1	3693848	.	TCTCTGTCTCTGTCTCTG	.	.	.	END=3693865;RU=tctctg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:224.771:366.612,131.36:0.0,0.0:0.0,4.71796e-07,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:201.695:326.675,113.385:0.0,0.0:0.0,1.96197e-06,1.0
-chr1	3693870	.	TGTGTGTGTGTGTG	.	.	.	END=3693883;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:7,7:7-7,7-7:20,10,0,2:7,20:4,1|6,1:186.249:366.612,131.36:0.0,0.0:6.01707e-37,5.85978e-06,0.999995	0/0:30:0.999913:7,7:7-8,7-8:17,8,0,3:7,17:6,3:159.633:326.675,113.385:0.261581,0.261581:1.32769e-31,2.84845e-05,0.999972
-chr1	3695906	.	TTTTATTTTATTTTA	TTTTATTTTATTTTATTTTA	.	.	END=3695920;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.977606:4,4:4-4,4-4:9,10,0,2:4,9:3,2:143.282:366.612,131.36:0.0,0.0:0.0,0.00535545,0.994656	0/0:28:0.999485:3,3:3-3,3-3:14,12,0,2:3,14:2,2:185.671:326.675,113.385:0.0,0.0:1.2918e-40,0.000265004,0.999736
-chr1	3699904	.	CTTTCTTTCTTT	.	.	.	END=3699915;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997682:3,3:3-3,3-3:13,13,0,0:3,13:NULL:177.632:366.612,131.36:0.0,0.0:3.5e-43,0.00138937,0.998617	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:175.035:326.675,113.385:0.0,0.0:0.0,3.71979e-07,1.0
-chr1	3700824	.	CATCATCATCAT	.	.	.	END=3700835;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:24,21,0,4:4,24:3,4:317.857:366.612,131.36:0.0,0.0:0.0,3.12785e-07,1.0	0/0:66:1.0:4,4:4-4,4-4:47,15,0,4:4,47:3,4:350.769:326.675,113.385:0.0,0.0:0.0,3.01842e-14,1.0
-chr1	3702280	.	AAATAAATAAAT	.	.	.	END=3702291;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:24,15,0,2:3,24:2,2:246.834:366.612,131.36:0.0,0.0:0.0,6.36609e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.624:326.675,113.385:0.0,0.0:0.0,2.31843e-06,1.0
-chr1	3702293	.	AAATAAAATAAAATA	.	.	.	END=3702307;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:226.913:366.612,131.36:0.0,0.0:0.0,1.69776e-06,1.0	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:143.124:326.675,113.385:0.0,0.0:0.0,9.21183e-06,0.999993
-chr1	3708462	.	GAGAGAGAGAGAGA	GAGAGAGAGA	.	.	END=3708475;RU=ga;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.00667709:5,5:1-6,1-6:0,9,0,0:NULL:NULL:84.5076:366.612,131.36:1.98272,1.98272:0.147395,0.516524,0.336216	0/0:28:0.999898:7,7:7-7,7-7:17,7,0,3:7,17:4,1|5,1|6,1:157.139:326.675,113.385:0.0990099,0.0990099:1.44551e-31,3.82113e-05,0.999963
-chr1	3712175	.	ACACACACACACACACACACACACACAC	ACACACACACACACAC	.	.	END=3712202;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.723808:8,8:7-11,7-11:5,16,0,4:8,5:6,2|7,1|8,1:197.448:366.612,131.36:1.37592,1.37592:0.976772,0.0232742,1.39106e-16	0/0:38:0.866293:14,14:13-16,13-16:15,14,0,7:13,3|14,12:6,1|7,1|9,2|10,1|12,1|13,1:256.427:326.675,113.385:0.696456,0.696456:1.35313e-13,0.133089,0.867002
-chr1	3712203	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=3712260;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0579816:30,32:30-33,30-33:0,12,0,7:NULL:5,1|7,1|8,3|11,1|15,1:169.773:366.612,131.36:1.06793,1.04894:0.0,0.0,1.0	0/0:41:0.954639:29,29:24-30,24-30:11,12,0,14:28,2|29,9:5,1|6,1|7,1|13,1|14,1|15,1|16,1|18,1|19,1|20,2|21,1|24,1|29,1:276.241:326.675,113.385:1.67885,1.67885:5.44121e-18,0.0265952,0.973455
-chr1	3719601	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3719644;RU=ag;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:19:0.0347453:30,33:10-32,10-32:0,9,0,8:NULL:13,1|14,1|19,1|20,1|22,1|26,1|28,1|30,1:149.785:366.612,131.36:9.11023,9.18537:1.2421e-29,0.214365,0.785679	0/1:38:0.465736:22,25:21-22,20-25:16,11,0,11:20,5|21,3|22,8:7,1|10,2|14,2|15,2|20,1|21,1|24,1|25,1:285.322:326.675,113.385:0.358902,1.23703:2.13583e-17,1.41103e-05,0.999987
-chr1	3719848	.	CCAGCCAGCCAG	.	.	.	END=3719859;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:216.479:366.612,131.36:0.0,0.0:0.0,8.62623e-07,1.0	0/0:46:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:288.791:326.675,113.385:0.0,0.0:0.0,1.16681e-07,1.0
-chr1	3720011	.	GTGGTGGTGGTG	.	.	.	END=3720022;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:25,15,0,0:4,25:NULL:234.32:366.612,131.36:0.0,0.0:0.0,2.50935e-07,1.0	0/0:47:1.0:4,4:4-4,4-4:35,12,0,0:4,35:NULL:254.334:326.675,113.385:0.0,0.0:0.0,2.74008e-10,1.0
-chr1	3722193	.	CACCACCACCAC	.	.	.	END=3722204;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999986:4,4:4-4,4-4:19,20,0,0:4,19:NULL:255.587:366.612,131.36:0.0,0.0:0.0,2.0731e-05,0.999979	0/0:36:0.999995:4,4:4-4,4-4:20,16,0,0:4,20:NULL:226.869:326.675,113.385:0.0,0.0:0.0,1.35846e-05,0.999987
-chr1	3724786	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3724835;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.920241:8,8:7-8,7-8:11,6,0,0:7,2|8,9:NULL:107.946:366.612,131.36:0.311527,0.311527:1.0,0.0,0.0	0/2:64:0.88837:25,27:13-26,13-27:13,28,0,22:23,2|25,8|26,3:5,1|7,3|9,1|12,2|13,2|14,1|15,2|16,1|19,2|20,1|22,1|23,1|24,3|27,1:510.895:326.675,113.385:3.432,4.39533:6.1595e-17,1.69852e-07,1.0
-chr1	3724835	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG	.	.	END=3724868;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.704735:7,7:6-19,6-19:14,10,0,0:6,2|7,12:NULL:156.457:366.612,131.36:5.39532,5.39532:0.999773,0.000228516,0.0	0/0:70:1.0:17,17:8-17,8-17:27,26,0,15:17,27:4,2|5,2|7,1|8,4|9,1|13,1|14,3|15,1:469.515:326.675,113.385:2.68881,2.68881:0.0,8.94391e-08,1.0
-chr1	3726870	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	END=3726905;RU=cttc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.995342:6,7:6-9,7-9:6,5,0,0:6,2|7,4:NULL:80.5326:366.612,131.36:1.26508,0.526896:0.999614,0.000386882,3.11278e-14	0/0:21:0.670658:9,9:9-9,9-9:5,13,0,3:9,5:3,1|6,2:160.314:326.675,113.385:0.19802,0.19802:7.56913e-10,0.260988,0.739012
-chr1	3727052	.	CCACCCACCCAC	.	.	.	END=3727063;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999387:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.249:366.612,131.36:0.0,0.0:0.0,0.000337427,0.999666	0/0:44:1.0:3,3:3-3,3-3:31,9,0,4:3,31:2,3|3,1:231.54:326.675,113.385:0.0,0.0:0.0,5.74388e-10,1.0
-chr1	3727955	.	CACACACACACA	CACACA,CACACACACA	.	.	END=3727966;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:13:0.523675:5,5:5-6,5-6:4,8,0,0:5,4:NULL:88.9008:366.612,131.36:0.605662,0.605662:0.794176,0.205873,4.81081e-08	1/0:29:0.323451:3,6:3-6,3-6:2,27,0,0:6,2:NULL:249.758:326.675,113.385:1.38061,1.03663:9.28477e-05,0.665603,0.334317
-chr1	3730566	.	ATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3730609;RU=at;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:5:0.0242636:23,23:23-27,23-27:0,3,0,0:NULL:NULL:27.3808:366.612,131.36:1.10572,1.10572:0.0,0.0,1.0	1/1:11:0.167736:21,21:17-21,17-21:2,8,0,0:21,2:NULL:84.4048:326.675,113.385:1.1439,1.1439:0.620722,0.34227,0.0370962
-chr1	3730917	.	AAAATAAAATAAAAT	.	.	.	END=3730931;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99712:3,3:3-3,3-3:12,10,0,0:3,12:NULL:138.177:366.612,131.36:0.0,0.0:1.15463e-39,0.0017405,0.998262	0/0:24:0.999991:3,3:3-3,3-3:18,6,0,0:3,18:NULL:128.579:326.675,113.385:0.0,0.0:0.0,1.8288e-05,0.999985
-chr1	3732771	.	ACAAACAAACAAACAA	.	.	.	END=3732786;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:20,9,0,0:4,20:NULL:159.888:366.612,131.36:0.0,0.0:0.0,6.7041e-06,0.999994	0/0:52:1.0:4,4:4-4,4-4:37,12,0,3:4,37:3,3:281.16:326.675,113.385:0.0,0.0:0.0,2.69868e-11,1.0
-chr1	3733827	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3733846;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999765:6,6:6-6,6-6:15,13,0,6:6,15:3,2|4,1|5,3:218.421:366.612,131.36:0.0,0.0:0.0,2.32535e-05,0.999979	0/0:42:1.0:5,5:5-5,5-5:20,18,0,4:5,20:3,1|4,3:274.694:326.675,113.385:0.0,0.0:0.0,4.27277e-06,0.999995
-chr1	3733847	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3733864;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999818:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.606:366.612,131.36:0.0,0.0:0.0,0.000105411,0.999895	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:221.582:326.675,113.385:0.0,0.0:0.0,4.92952e-06,0.999995
-chr1	3742835	.	ACATACATACAT	.	.	.	END=3742846;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.131:366.612,131.36:0.0,0.0:0.0,2.71881e-07,1.0	0/0:23:0.999756:3,3:3-3,3-3:15,6,0,2:3,15:2,2:128.457:326.675,113.385:0.0,0.0:0.0,0.000104244,0.999896
-chr1	3744407	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	END=3744462;RU=ggaa;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.993983:11,11:11-11,11-11:11,3,0,6:11,11:3,1|5,1|7,2|8,1|9,1:116.828:366.612,131.36:0.0,0.0:0.999066,0.000937214,5.358e-29	0/0:35:0.994739:14,14:14-14,14-14:11,13,0,11:14,11:3,1|4,2|5,1|7,2|8,2|11,1|12,2:247.076:326.675,113.385:0.0,0.0:3.08675e-25,0.00330763,0.996701
-chr1	3745050	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAG	.	.	END=3745103;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.00833439:3,3:2-5,2-5:0,11,0,0:NULL:NULL:95.702:366.612,131.36:0.85137,0.85137:0.805952,0.189878,0.00422831	0/0:28:0.811515:27,27:23-27,23-27:6,13,0,7:27,6:11,1|17,2|19,1|23,1|26,2:200.791:326.675,113.385:1.59366,1.59366:2.83126e-07,0.0964777,0.903624
-chr1	3752086	.	GTGTGTGTGTGT	.	.	.	END=3752097;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999816:6,6:6-6,6-6:16,7,0,0:6,16:NULL:130.022:366.612,131.36:0.0,0.0:2.15979e-39,0.000115849,0.999887	0/0:39:1.00001:6,6:6-6,6-6:21,15,0,2:6,21:5,2:235.47:326.675,113.385:0.139319,0.139319:0.0,2.68487e-06,1.0
-chr1	3758404	.	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	AAACAAAACAAAACAAAACAAAACAAAACAAAACA	.	.	END=3758448;RU=aaaca;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.996019:7,7:7-7,7-7:11,11,0,3:7,11:3,1|5,1|6,1:166.028:366.612,131.36:0.0,0.0:0.998838,0.00116594,1.13138e-28	0/0:28:0.99793:9,9:9-9,9-9:12,9,0,7:9,12:5,3|7,1|8,3:176.998:326.675,113.385:0.0,0.0:2.98334e-31,0.00078847,0.999217
-chr1	3765019	.	ATTTATTTATTT	.	.	.	END=3765030;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999994:3,3:3-3,3-3:19,15,0,0:3,19:NULL:207.901:366.612,131.36:0.0,0.0:0.0,1.32469e-05,0.999987	0/0:28:0.999971:3,3:3-3,3-3:18,10,0,0:3,18:NULL:156.196:326.675,113.385:0.0,0.0:0.0,2.37635e-05,0.999979
-chr1	3766121	.	ACCCACCCACCC	.	.	.	END=3766132;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.963733:3,3:3-3,3-3:7,15,0,0:3,7:NULL:162.987:366.612,131.36:0.0,0.0:4.39709e-22,0.0207749,0.979265	0/0:30:0.981572:3,3:3-3,3-3:9,21,0,0:3,9:NULL:219.913:326.675,113.385:0.0,0.0:9.73776e-28,0.0135567,0.986474
-chr1	3774612	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3774657;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.861539:19,19:18-19,18-19:13,9,0,10:18,3|19,10:7,2|10,1|13,1|14,2|15,2|17,1|18,1:225.995:366.612,131.36:0.35561,0.35561:1.0,0.0,0.0	0/2:51:0.766394:23,24:21-23,17-25:16,13,0,19:21,2|22,3|23,11:5,2|8,1|9,3|11,3|13,1|14,5|21,1|22,1|23,1|24,1:364.47:326.675,113.385:0.893506,2.31438:9.02236e-21,4.32181e-05,0.999957
-chr1	3779502	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3779519;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.978872:3,3:3-3,3-3:9,9,0,0:3,9:NULL:117.204:366.612,131.36:0.0,0.0:9.67506e-30,0.0137041,0.986326	0/0:23:0.996225:3,3:3-3,3-3:11,10,0,2:3,11:2,2:146.011:326.675,113.385:0.0,0.0:4.10704e-36,0.00189986,0.998108
-chr1	3784264	.	TTTATTTATTTA	.	.	.	END=3784275;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:224.825:366.612,131.36:0.0,0.0:0.0,3.24046e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:196.026:326.675,113.385:0.0,0.0:0.0,4.68302e-07,1.0
-chr1	3785257	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3785292;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.796789:23,24:21-25,24-25:10,9,0,20:23,4|24,6:4,2|5,2|6,1|9,1|10,2|11,2|15,1|16,2|17,1|18,4|22,1|23,1:290.161:366.612,131.36:0.845709,0.242928:0.0,0.0,1.0	0/0:34:0.999161:18,18:18-18,18-18:16,9,0,7:18,16:6,2|10,1|11,2|13,1|16,1:210.872:326.675,113.385:0.0,0.0:1.9113e-20,0.000261504,0.999742
-chr1	3786174	.	TTTATTTATTTA	.	.	.	END=3786185;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:169.623:366.612,131.36:0.0,0.0:0.0,2.02586e-06,1.0	0/0:26:0.999919:3,3:3-3,3-3:17,9,0,0:3,17:NULL:151.107:326.675,113.385:0.0,0.0:0.0,6.01705e-05,0.999941
-chr1	3786490	.	TAAATAAATAAA	.	.	.	END=3786501;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:23,5,0,0:3,23:NULL:139.261:366.612,131.36:0.0,0.0:0.0,4.1567e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:185.487:326.675,113.385:0.0,0.0:0.0,1.83393e-08,1.0
-chr1	3788152	.	CATACATACATA	.	.	.	END=3788163;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999885:3,3:3-3,3-3:16,19,0,0:3,16:NULL:237.894:366.612,131.36:0.0,0.0:0.0,8.15691e-05,0.999919	0/0:33:0.999993:3,3:3-3,3-3:18,10,0,5:3,18:2,5:200.301:326.675,113.385:0.0,0.0:0.0,1.22226e-05,0.999987
-chr1	3788588	.	CTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCC	.	.	.	END=3788627;RU=ctctctcc;PERIOD=8;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.645137:5,5:2-5,2-5:5,11,0,0:5,5:NULL:123.911:366.612,131.36:0.675883,0.675883:1.07449e-14,0.312121,0.68789	0/0:18:0.887773:5,5:5-5,5-5:6,9,0,3:5,6:2,1|4,2:124.338:326.675,113.385:0.29703,0.29703:5.95352e-18,0.0705128,0.929582
-chr1	3789797	.	AATAAATAAATA	.	.	.	END=3789808;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.998953:3,3:3-3,3-3:14,6,0,0:3,14:NULL:115.25:366.612,131.36:0.0,0.0:0.0,0.000634039,0.99937	0/0:21:0.999822:3,3:3-3,3-3:16,5,0,0:3,16:NULL:110.646:326.675,113.385:0.0,0.0:0.0,9.87633e-05,0.999903
-chr1	3805050	.	TTGGTTGGTTGG	TTGGTTGG	.	.	END=3805061;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0810857:2,2:1-3,1-3:0,19,0,0:NULL:NULL:190.732:366.612,131.36:0.651813,0.651813:0.251698,0.520872,0.227449	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:231.613:326.675,113.385:0.0,0.0:0.0,7.69771e-08,1.0
-chr1	3805151	.	CTGCCTCTGCCTCTGCCTCTGCCT	CTGCCT,CTGCCTCTGCCT	.	.	END=3805174;RU=ctgcct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:19:0.268599:1,2:1-2,1-2:0,19,0,0:NULL:NULL:189.234:366.612,131.36:0.573574,0.493065:0.660386,0.313909,0.0257531	0/0:40:1.0:4,4:4-4,4-4:25,12,0,3:4,25:3,3:229.306:326.675,113.385:0.0,0.0:0.0,1.29196e-07,1.0
-chr1	3805421	.	ACCCACCCACCC	.	.	.	END=3805432;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.45434:3,3:2-3,2-3:3,5,0,0:3,3:NULL:53.6259:366.612,131.36:0.222277,0.222277:2.34056e-09,0.235506,0.764519	0/0:17:0.933602:3,3:3-3,3-3:7,10,0,0:3,7:NULL:114.943:326.675,113.385:0.0,0.0:2.59369e-20,0.0362776,0.96379
-chr1	3808366	.	TTGTTTGTTTGT	.	.	.	END=3808377;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999908:3,3:3-3,3-3:17,26,0,0:3,17:NULL:306.492:366.612,131.36:0.0,0.0:0.0,7.48206e-05,0.999926	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:166.117:326.675,113.385:0.0,0.0:0.0,5.45415e-06,0.999995
-chr1	3820046	.	ATACATACATAC	.	.	.	END=3820057;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:284.425:366.612,131.36:0.0,0.0:0.0,2.20899e-07,1.0	0/0:20:0.998942:3,3:3-3,3-3:13,5,0,2:3,13:2,2:109.567:326.675,113.385:0.0,0.0:1.1e-44,0.000421401,0.999583
-chr1	3820489	.	GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	GAAGA	.	.	END=3820553;RU=gaaga;PERIOD=5;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0470469:1,1:1-3,1-3:0,12,0,0:NULL:NULL:107.696:366.612,131.36:0.738802,0.738802:0.881235,0.117651,0.00121683	0/0:20:0.495419:13,13:11-13,11-13:3,13,0,4:13,3:6,1|11,2|12,1:162.65:326.675,113.385:0.634282,0.634282:1.54106e-06,0.353491,0.646549
-chr1	3821324	.	ATGAAATGAAATGAA	.	.	.	END=3821338;RU=atgaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:193.08:366.612,131.36:0.0,0.0:0.0,2.98735e-07,1.0	0/0:30:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:162.026:326.675,113.385:0.0,0.0:0.0,2.89903e-06,1.0
-chr1	3821877	.	AATAAATAAATA	.	.	.	END=3821888;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:209.292:366.612,131.36:0.0,0.0:0.0,3.26394e-06,1.0	0/0:24:0.999983:3,3:3-3,3-3:18,6,0,0:3,18:NULL:123.511:326.675,113.385:0.0,0.0:0.0,2.01864e-05,0.99998
-chr1	3824596	.	GGGTGGGTGGGT	.	.	.	END=3824607;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.270275:3,3:3-5,3-5:2,6,0,0:3,2:NULL:60.4922:366.612,131.36:0.557805,0.557805:1.71077e-06,0.273652,0.726351	0/0:23:0.985127:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.238:326.675,113.385:0.0,0.0:2.41429e-25,0.00757214,0.992446
-chr1	3830973	.	TGGCTGGCTGGC	.	.	.	END=3830984;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999344:3,3:3-3,3-3:14,25,0,0:3,14:NULL:289.904:366.612,131.36:0.0,0.0:0.0,0.000518182,0.999484	0/0:63:1.0:3,3:3-3,3-3:38,22,0,3:3,38:2,3:370.915:326.675,113.385:0.0,0.0:0.0,1.51153e-11,1.0
-chr1	3835805	.	ACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3835830;RU=ac;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:55:0.524651:21,21:19-24,19-24:16,17,0,20:19,3|20,2|21,9|22,2:4,1|5,1|7,1|10,3|12,1|14,3|16,3|17,1|18,4|19,1|20,1:410.769:366.612,131.36:1.4981,1.4981:0.0,0.0,1.0	0/0:44:0.990705:13,13:12-13,12-13:17,19,0,7:12,3|13,14:8,1|9,1|10,2|11,1|12,1|13,1:317.303:326.675,113.385:0.222277,0.222277:4.40569e-26,0.0089973,0.991023
-chr1	3838836	.	TTGTTTGTTTGTTTGTTTGT	TTGT	.	.	END=3838855;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0611499:1,1:1-3,1-3:0,19,0,0:NULL:NULL:176.361:366.612,131.36:0.763982,0.763982:0.495318,0.428118,0.0766308	0/0:22:0.99562:5,5:5-5,5-5:11,9,0,2:5,11:3,1|4,1:142.612:326.675,113.385:0.0,0.0:2.51935e-32,0.0024653,0.997541
-chr1	3842935	.	GTTTGTTTGTTTGTTT	GTTTGTTTGTTT	.	.	END=3842950;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.103226:3,3:1-4,1-4:0,13,0,3:NULL:2,2|3,1:139.412:366.612,131.36:0.668152,0.668152:0.265285,0.537828,0.196891	0/0:21:0.998957:4,4:4-4,4-4:13,5,0,3:4,13:2,3:122.152:326.675,113.385:0.0,0.0:1.62355e-39,0.000587118,0.999416
-chr1	3846941	.	ACCCACCCACCC	.	.	.	END=3846952;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.964559:3,3:3-3,3-3:8,7,0,0:3,8:NULL:90.4399:366.612,131.36:0.0,0.0:1.77949e-24,0.014786,0.985246	0/0:21:0.98379:3,3:3-3,3-3:9,12,0,0:3,9:NULL:143.689:326.675,113.385:0.0,0.0:3.48521e-27,0.00981038,0.990209
-chr1	3856577	.	CTTGCTTGCTTGCTTGCTTGCTTG	CTTGCTTGCTTGCTTGCTTGCTTGCTTG	.	.	END=3856600;RU=cttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.999866:7,7:7-7,7-7:16,22,0,6:7,16:3,2|4,1|6,3:304.611:366.612,131.36:0.0,0.0:0.0,1.80724e-05,0.999985	0/0:47:1.0:6,6:6-6,6-6:20,21,0,6:6,20:4,1|5,5:322.057:326.675,113.385:0.0,0.0:0.0,7.0502e-06,0.999994
-chr1	3858322	.	GGAGGGAGGGAG	.	.	.	END=3858333;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:287.409:366.612,131.36:0.0,0.0:0.0,6.46565e-13,1.0	0/0:40:1.0:3,3:3-3,3-3:28,10,0,2:3,28:2,2:214.309:326.675,113.385:0.0,0.0:0.0,1.39737e-08,1.0
-chr1	3859194	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTG	.	.	END=3859211;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:69:1.0:5,5:5-5,5-5:41,24,0,4:5,41:3,2|4,2:410.296:366.612,131.36:0.0,0.0:1.0,2.43332e-12,0.0	0/0:23:0.999991:6,6:6-6,6-6:18,3,0,2:6,18:4,1|5,1:115.133:326.675,113.385:0.0,0.0:4e-45,1.38367e-05,0.999987
-chr1	3863716	.	AATAACAATAACAATAAC	.	.	.	END=3863733;RU=aataac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:208.152:366.612,131.36:0.0,0.0:0.0,1.27778e-06,1.0	0/0:40:1.00001:3,3:3-3,3-3:21,15,0,4:3,21:2,4:248.811:326.675,113.385:0.0,0.0:0.0,2.85121e-06,1.0
-chr1	3869461	.	AAAACAAAACAAAACAAAACAAAAC	AAAAC	.	.	END=3869485;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0233967:1,1:1-2,1-2:0,7,0,0:NULL:NULL:61.8713:366.612,131.36:0.379868,0.379868:0.2013,0.56247,0.236278	0/0:40:0.999988:5,5:4-5,4-5:20,17,0,2:5,20:2,2:254.198:326.675,113.385:0.284901,0.284901:0.0,2.21254e-05,0.999979
-chr1	3870192	.	TAAATAAATAAA	.	.	.	END=3870203;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999475:3,3:3-3,3-3:14,20,0,0:3,14:NULL:237.66:366.612,131.36:0.0,0.0:0.0,0.000336171,0.999667	0/0:16:0.939518:3,3:3-3,3-3:7,9,0,0:3,7:NULL:111.194:326.675,113.385:0.0,0.0:1.192e-24,0.0342012,0.965862
-chr1	3870234	.	AAAATAAAATAAAAT	AAAATAAAAT	.	.	END=3870248;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999274:2,2:2-2,2-2:13,21,0,0:2,13:NULL:246.786:366.612,131.36:0.0,0.0:0.999607,0.000394087,3.85503e-36	0/0:14:0.945741:3,3:3-3,3-3:7,7,0,0:3,7:NULL:91.0854:326.675,113.385:0.0,0.0:1.41804e-21,0.0326951,0.967364
-chr1	3886751	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=3886794;RU=taga;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99542:11,11:10-11,10-11:12,14,0,0:11,12:NULL:180.536:366.612,131.36:0.36513,0.36513:5.1308e-32,0.00375858,0.996254	0/0:26:0.999928:11,11:11-11,11-11:17,4,0,4:11,17:3,1|5,1|9,1|10,1:141.46:326.675,113.385:0.139319,0.139319:3e-45,3.76311e-05,0.999964
-chr1	3896272	.	ACCCACCCACCC	.	.	.	END=3896283;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.683871:3,3:2-3,2-3:5,4,0,0:3,5:NULL:58.6488:366.612,131.36:0.169767,0.169767:5.75032e-15,0.148271,0.851811	0/0:46:0.997375:3,3:3-3,3-3:12,34,0,0:3,12:NULL:355.046:326.675,113.385:0.0,0.0:1.21639e-35,0.00217,0.997837
-chr1	3898788	.	TAAATAAATAAA	.	.	.	END=3898799;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:236.45:366.612,131.36:0.0,0.0:0.0,4.53293e-06,0.999995	0/0:22:0.998845:3,3:3-3,3-3:13,9,0,0:3,13:NULL:137.994:326.675,113.385:0.0,0.0:1.90907e-39,0.000696988,0.999308
-chr1	3898809	.	ATAATAATAATA	.	.	.	END=3898820;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999304:4,4:4-4,4-4:14,19,0,0:4,14:NULL:234.002:366.612,131.36:0.0,0.0:6.90189e-39,0.000574116,0.99943	0/0:14:0.843641:4,4:3-4,3-4:6,7,0,0:4,6:NULL:91.4475:326.675,113.385:0.497026,0.497026:9.08117e-17,0.0951607,0.904939
-chr1	3902855	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=3902882;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.972597:6,6:5-6,5-6:19,10,0,2:5,2|6,17:5,2:191.553:366.612,131.36:0.398507,0.398507:0.999994,8.10062e-06,9.10738e-35	0/0:32:0.999965:7,7:7-7,7-7:18,12,0,2:7,18:5,1|6,1:195.079:326.675,113.385:0.0,0.0:0.0,2.76481e-05,0.999972
-chr1	3908575	.	TGTTTTGTTTTGTTT	.	.	.	END=3908589;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:23,19,0,0:3,23:NULL:261.146:366.612,131.36:0.0,0.0:0.0,8.71967e-07,1.0	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:168.466:326.675,113.385:0.0,0.0:0.0,1.73616e-06,1.0
-chr1	3911778	.	ACAGACAGACAG	.	.	.	END=3911789;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,14,0,0:3,20:NULL:202.137:366.612,131.36:0.0,0.0:0.0,3.67449e-06,1.0	0/0:35:0.999993:3,3:3-3,3-3:19,14,0,2:3,19:2,2:218.129:326.675,113.385:0.0,0.0:0.0,1.6093e-05,0.999986
-chr1	3913472	.	CCCCACCCCCACCCCCAC	.	.	.	END=3913489;RU=ccccac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.994325:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.599:366.612,131.36:0.0,0.0:6.82753e-33,0.00376458,0.996247	0/0:17:0.799407:3,3:1-3,1-3:5,12,0,0:3,5:NULL:130.679:326.675,113.385:0.339533,0.339533:1.86304e-15,0.140504,0.85958
-chr1	3917711	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=3917748;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:18:0.889114:19,24:19-23,22-24:7,5,0,5:19,3|23,2|24,2:5,1|7,1|12,1|13,1|15,1:123.646:366.612,131.36:1.71576,0.657801:3.79657e-12,5.74102e-05,0.999942	0/0:23:0.682436:19,19:18-19,18-19:10,6,0,7:18,2|19,8:5,1|9,1|11,1|14,1|15,1|18,2:158.387:326.675,113.385:0.452422,0.452422:5.22233e-11,0.308645,0.691365
-chr1	3919065	.	TTTGTTTGTTTG	.	.	.	END=3919076;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999992:3,3:3-3,3-3:19,11,0,0:3,19:NULL:175.122:366.612,131.36:0.0,0.0:0.0,1.60593e-05,0.999986	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:218.523:326.675,113.385:0.0,0.0:0.0,1.10826e-06,1.0
-chr1	3919745	.	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTT	TATTTTATTTTATTTTATTTTATTTTATTT	.	.	END=3919794;RU=tattt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.940197:6,6:6-6,6-6:8,16,0,2:6,8:4,1|5,1:200.349:366.612,131.36:0.417958,0.417958:1.0,0.0,0.0	0/0:31:0.940551:10,10:10-10,10-10:7,12,0,12:10,7:4,5|6,4|7,1|8,1|9,1:223.928:326.675,113.385:0.0,0.0:5.12712e-19,0.0354483,0.964613
-chr1	3923978	.	TATATATATATATATA	TATATATATATATATATA	.	.	END=3923993;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.926104:9,9:7-10,7-10:8,4,0,0:9,8:NULL:67.4941:366.612,131.36:0.929323,0.929323:6.6815e-18,0.0350496,0.965016	0/0:18:0.998938:8,8:8-8,8-8:14,4,0,0:8,14:NULL:95.9206:326.675,113.385:0.0,0.0:3.50024e-20,0.000529512,0.999476
-chr1	3924698	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	END=3924742;RU=gagag;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.0643016:9,9:6-11,6-11:0,11,0,9:NULL:2,1|3,1|6,3|7,2|8,1|9,1:165.574:366.612,131.36:1.57311,1.57311:5.08532e-09,0.495721,0.504304	1/1:19:0.962867:8,8:8-8,8-8:8,8,0,3:8,8:5,1|6,1|7,1:132.604:326.675,113.385:0.0,0.0:0.985408,0.0146238,3.942e-21
-chr1	3924854	.	CTGCTGCTGCTG	.	.	.	END=3924865;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999785:4,4:4-4,4-4:16,13,0,0:4,16:NULL:184.539:366.612,131.36:0.0,0.0:0.0,0.000136256,0.999865	0/0:29:0.999959:4,4:4-4,4-4:18,11,0,0:4,18:NULL:175.104:326.675,113.385:0.0,0.0:0.0,4.83312e-05,0.999955
-chr1	3925698	.	AGAGAGAGAGAG	.	.	.	END=3925709;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:31,7,0,2:6,31:5,2:208.134:366.612,131.36:0.0,0.0:0.0,2.33183e-09,1.0	0/0:26:1.0:6,6:6-6,6-6:26,0,0,0:6,26:NULL:102.029:326.675,113.385:0.0,0.0:0.0,9.26147e-08,1.0
-chr1	3929285	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=3929312;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.99692:11,11:10-11,10-11:12,20,0,7:11,12:4,1|6,2|8,3|10,1:289.866:366.612,131.36:0.169767,0.169767:0.999713,0.000288637,6.51961e-32	0/0:41:0.19087:14,14:14-16,14-16:24,8,0,7:14,24:7,1|8,2|10,1|11,1|13,1|16,1:245.259:326.675,113.385:0.991682,0.991682:2.33484e-36,7.62607e-08,1.0
-chr1	3932876	.	AAAACAAAACAAAAC	.	.	.	END=3932890;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99924:3,3:3-3,3-3:13,14,0,0:3,13:NULL:182.319:366.612,131.36:0.0,0.0:1.5e-44,0.000526743,0.999476	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:136.58:326.675,113.385:0.0,0.0:0.0,8.88413e-06,0.999994
-chr1	3936576	.	AACAAACAAACA	.	.	.	END=3936587;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,16,0,0:3,23:NULL:233.798:366.612,131.36:0.0,0.0:0.0,1.09396e-06,1.0	0/0:23:0.999654:3,3:3-3,3-3:15,8,0,0:3,15:NULL:130.869:326.675,113.385:0.0,0.0:0.0,0.000206511,0.999796
-chr1	3943923	.	ATATATATATAT	.	.	.	END=3943934;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996744:6,6:6-6,6-6:12,17,0,0:6,12:NULL:198.475:366.612,131.36:0.0,0.0:2.90152e-22,0.00225795,0.997746	0/0:28:0.999959:6,6:6-6,6-6:18,10,0,0:6,18:NULL:165.23:326.675,113.385:0.0,0.0:1.10252e-32,4.65672e-05,0.999956
-chr1	3945858	.	AGAAAGAAAGAA	.	.	.	END=3945869;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.994776:3,3:3-3,3-3:11,13,0,0:3,11:NULL:164.432:366.612,131.36:0.0,0.0:9.3349e-38,0.00312694,0.996882	0/0:23:0.99866:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.299:326.675,113.385:0.0,0.0:1.5e-44,0.00084985,0.999156
-chr1	3949566	.	ACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=3949577;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0905103:15,15:3-15,3-15:4,18,0,0:15,4:NULL:186.702:366.612,131.36:4.19547,4.19547:0.0,0.533203,0.466901	0/0:35:0.999985:6,6:6-6,6-6:19,15,0,0:6,19:NULL:211.802:326.675,113.385:0.139319,0.139319:6e-45,2.42264e-05,0.999978
-chr1	3952215	.	AAACAAACAAACAAAC	.	.	.	END=3952230;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999761:4,4:3-4,3-4:15,20,0,4:4,15:2,2|3,2:270.441:366.612,131.36:0.345543,0.345543:0.0,0.000148609,0.999856	0/0:44:1.0:4,4:3-4,3-4:23,15,0,5:4,23:2,1|3,4:262.927:326.675,113.385:0.169767,0.169767:0.0,5.08034e-07,1.0
-chr1	3952974	.	AGACAGACAGAC	.	.	.	END=3952985;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:167.283:366.612,131.36:0.0,0.0:0.0,2.12211e-06,1.0	0/0:27:1.00001:3,3:3-3,3-3:21,4,0,2:3,21:2,2:131.297:326.675,113.385:0.0,0.0:0.0,1.24022e-06,1.0
-chr1	3955861	.	TAAATAAATAAA	.	.	.	END=3955872;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:231.683:366.612,131.36:0.0,0.0:0.0,2.6316e-07,1.0	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:147.329:326.675,113.385:0.0,0.0:0.0,4.77117e-07,1.0
-chr1	3956922	.	TAATAATAATAA	.	.	.	END=3956933;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999886:4,4:4-4,4-4:17,18,0,0:4,17:NULL:230.649:366.612,131.36:0.0,0.0:0.0,8.15416e-05,0.999919	0/0:49:1.0:4,4:4-4,4-4:31,16,0,2:4,31:3,2:286.016:326.675,113.385:0.0,0.0:0.0,2.13785e-09,1.0
-chr1	3960762	.	TGATGATGATGA	.	.	.	END=3960773;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:29,20,0,2:4,29:3,2:305.791:366.612,131.36:0.0,0.0:0.0,7.27355e-09,1.0	0/0:38:1.0:4,4:4-4,4-4:19,16,0,3:4,19:3,3:240.278:326.675,113.385:0.0,0.0:0.0,8.06454e-06,0.999994
-chr1	3967310	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3967353;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.306429:21,25:21-21,12-25:13,0,0,9:21,11|22,2:7,1|8,1|9,1|12,1|14,1|15,1|19,1|20,1|25,1:145.172:366.612,131.36:0.139319,4.93443:7.43147e-05,0.999921,4.24387e-06	1/0:33:0.71542:21,22:19-23,21-23:8,13,0,10:21,3|22,5:6,1|11,2|12,3|15,1|17,1|18,1|21,1:236.647:326.675,113.385:1.12802,0.516942:0.000163929,0.727214,0.272628
-chr1	3969294	.	CAAACAAACAAACAAA	.	.	.	END=3969309;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:20,14,0,2:4,20:3,2:225.215:366.612,131.36:0.0,0.0:0.0,6.4141e-06,0.999995	0/0:26:0.995609:4,4:4-4,4-4:12,14,0,0:4,12:NULL:169.889:326.675,113.385:0.0,0.0:6.9e-43,0.00336124,0.996648
-chr1	3972539	.	TTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTAT	.	.	END=3972558;RU=ttat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.00001:6,6:6-6,6-6:20,14,0,5:6,20:3,1|4,1|5,3:241.788:366.612,131.36:0.0,0.0:0.0,6.07488e-07,1.0	0/0:30:0.999802:5,5:5-5,5-5:16,12,0,2:5,16:4,2:188.376:326.675,113.385:0.0,0.0:0.0,0.000120794,0.99988
-chr1	3985823	.	CACACACACACA	CA	.	.	END=3985834;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:40:1.00001:6,6:6-6,6-6:21,14,0,5:6,21:4,1|5,4:249.701:326.675,113.385:0.0,0.0:0.0,1.83576e-06,1.0
-chr1	3992697	.	GCAGAGGCAGAGGCAGAG	.	.	.	END=3992714;RU=gcagag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:25,21,0,2:3,25:2,2:304.686:366.612,131.36:0.0,0.0:0.0,1.71221e-07,1.0	0/0:28:0.999906:3,3:3-3,3-3:17,11,0,0:3,17:NULL:169.069:326.675,113.385:0.0,0.0:0.0,7.31684e-05,0.999926
-chr1	3996489	.	ACACACACACACACACACACACAC	ACACACACACACAC	.	.	END=3996512;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:1.0:7,7:7-7,7-7:20,7,0,0:7,20:NULL:142.446:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:37:0.999811:12,12:11-12,11-12:16,11,0,9:12,16:7,3|8,3|10,1|11,2:240.974:326.675,113.385:0.169767,0.169767:1.96006e-27,8.2643e-05,0.999918
-chr1	3997264	.	TTATTATTATTA	.	.	.	END=3997275;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99985:4,4:4-4,4-4:16,10,0,0:4,16:NULL:155.95:366.612,131.36:0.0,0.0:0.0,0.00010225,0.999902	0/0:17:0.979968:4,4:4-4,4-4:9,8,0,0:4,9:NULL:108.54:326.675,113.385:0.0,0.0:1.74558e-27,0.0128414,0.987186
-chr1	3997282	.	TTTATTTATTTA	.	.	.	END=3997293;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:163.036:366.612,131.36:0.0,0.0:0.0,4.92314e-06,0.999995	0/0:19:0.999445:3,3:3-3,3-3:14,5,0,0:3,14:NULL:103.056:326.675,113.385:0.0,0.0:0.0,0.00029396,0.999706
-chr1	4000875	.	ATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=4000920;RU=at;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.405946:8,8:8-8,8-8:3,2,0,0:8,3:NULL:33.0948:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/2:4:0.224362:21,21:18-21,18-21:2,2,0,0:21,2:NULL:27.9122:326.675,113.385:0.650759,0.650759:0.768271,0.231586,0.000171727
-chr1	4008030	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4008077;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.39318:21,21:19-23,19-23:10,17,0,14:19,2|21,6|22,2:5,1|6,1|8,2|10,1|11,1|12,1|15,1|18,2|19,1|20,3:320.681:366.612,131.36:1.12445,1.12445:0.997836,0.00217262,4.18948e-16	0/2:40:0.262515:24,41:24-25,24-44:10,11,0,19:23,2|24,6|25,2:4,1|6,1|7,1|11,1|13,1|14,2|16,2|17,1|18,2|19,1|21,1|22,3|23,1|41,1:316.903:326.675,113.385:0.35561,8.37565:7.71648e-11,1.76728e-05,0.999986
-chr1	4008365	.	AAGAAAGAAAGA	.	.	.	END=4008376;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,20,0,0:3,24:NULL:269.288:366.612,131.36:0.0,0.0:0.0,3.01382e-07,1.0	0/0:23:0.999946:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.165:326.675,113.385:0.0,0.0:0.0,2.00184e-05,0.99998
-chr1	4012417	.	AAAGAAAGAAAG	.	.	.	END=4012428;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999412:3,3:3-3,3-3:14,19,0,0:3,14:NULL:232.822:366.612,131.36:0.0,0.0:0.0,0.000418171,0.999583	0/0:20:0.999853:3,3:3-3,3-3:16,4,0,0:3,16:NULL:98.1249:326.675,113.385:0.0,0.0:0.0,7.07918e-05,0.999933
-chr1	4014539	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4014563;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999984:5,5:5-5,5-5:17,15,0,3:5,17:2,1|3,1|4,1:234.113:366.612,131.36:0.0,0.0:0.0,2.31096e-05,0.999979	0/0:30:0.999961:5,5:5-5,5-5:18,12,0,0:5,18:NULL:178.102:326.675,113.385:0.0,0.0:0.0,4.37563e-05,0.999957
-chr1	4019418	.	TATTTATTTATT	.	.	.	END=4019429;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:29,20,0,3:3,29:2,3:324.942:366.612,131.36:0.0,0.0:0.0,5.3575e-09,1.0	0/0:31:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:183.726:326.675,113.385:0.0,0.0:0.0,9.13158e-06,0.999993
-chr1	4036362	.	CTGGAGCTGGAGCTGGAG	.	.	.	END=4036379;RU=ctggag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:241.53:366.612,131.36:0.0,0.0:0.0,5.28407e-07,1.0	0/0:58:1.0:3,3:3-3,3-3:33,23,0,2:3,33:2,1|3,1:350.227:326.675,113.385:0.0,0.0:0.0,3.79735e-10,1.0
-chr1	4039989	.	TTGTTGTTGTTGTTG	.	.	.	END=4040003;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999953:5,5:5-5,5-5:17,11,0,4:5,17:4,3|5,1:198.973:366.612,131.36:0.0,0.0:0.0,1.54565e-05,0.999986	0/0:18:0.99925:5,5:5-5,5-5:14,4,0,0:5,14:NULL:89.9581:326.675,113.385:0.0,0.0:2.772e-42,0.000409517,0.999591
-chr1	4042319	.	CTTCTTCTTCTT	.	.	.	END=4042330;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999908:4,4:4-4,4-4:17,17,0,0:4,17:NULL:225.388:366.612,131.36:0.0,0.0:0.0,5.97355e-05,0.999941	0/0:27:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:131.321:326.675,113.385:0.0,0.0:0.0,1.48064e-06,1.0
-chr1	4043396	.	AGAAAAGAAAAGAAA	.	.	.	END=4043410;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.986364:3,3:3-3,3-3:9,8,0,0:3,9:NULL:111.117:366.612,131.36:0.0,0.0:1.46513e-23,0.00742272,0.992595	0/0:26:0.998571:3,3:3-3,3-3:12,12,0,2:3,12:2,2:163.438:326.675,113.385:0.0,0.0:5.81734e-31,0.000729566,0.999272
-chr1	4043458	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4043521;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:16:0.0474443:24,32:12-34,14-34:0,8,0,8:NULL:6,1|11,1|12,1|17,1|22,1|24,2|32,1:139.366:366.612,131.36:5.90214,4.69152:1.60462e-07,0.855372,0.144712	2/2:12:0.0103348:28,28:20-31,20-31:0,2,0,7:NULL:6,1|8,1|12,1|14,1|15,1|24,1|28,1:72.7319:326.675,113.385:5.03241,5.03241:0.48066,0.444317,0.0751495
-chr1	4048648	.	GAGTGAGTGAGT	.	.	.	END=4048659;RU=gagt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:33,25,0,0:3,33:NULL:358.07:366.612,131.36:0.0,0.0:0.0,1.58187e-09,1.0	0/0:52:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:304.176:326.675,113.385:0.0,0.0:0.0,1.0279e-09,1.0
-chr1	4048769	.	AATTAATTAATTAATTAATTAATT	.	.	.	END=4048792;RU=aatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:21,19,0,2:6,21:3,1|4,1:279.964:366.612,131.36:0.0,0.0:0.0,5.16892e-06,0.999995	0/0:34:0.998984:6,6:5-6,5-6:15,18,0,0:6,15:NULL:229.027:326.675,113.385:0.334882,0.334882:1.13576e-37,0.000935996,0.999066
-chr1	4049279	.	AAACAAACAAACAAAC	.	.	.	END=4049294;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:18,19,0,7:4,18:3,7:299.67:366.612,131.36:0.0,0.0:0.0,8.99795e-06,0.999994	0/0:40:1.0:4,4:4-4,4-4:26,14,0,0:4,26:NULL:233.691:326.675,113.385:0.0,0.0:0.0,2.26657e-07,1.0
-chr1	4055341	.	ATTATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=4055376;RU=att;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999969:12,12:12-12,12-12:18,10,0,6:12,18:7,2|10,3|11,1:213.116:366.612,131.36:0.14072,0.14072:3.86333e-28,2.54812e-05,0.999978	0/0:39:0.999999:12,12:12-12,12-12:19,12,0,8:12,19:4,2|6,1|7,1|9,1|10,1|11,2:247.211:326.675,113.385:0.0,0.0:6.52832e-30,8.2327e-06,0.999994
-chr1	4056452	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4056505;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.17784:27,27:26-30,26-30:2,15,0,8:27,2:7,1|12,1|14,1|17,3|22,1|25,1:218.029:366.612,131.36:1.68439,1.68439:0.00145928,0.39155,0.607056	0/0:35:0.31158:27,27:23-28,23-28:3,21,0,9:27,3:7,1|10,1|16,1|17,2|21,1|23,2|27,1:279.724:326.675,113.385:2.33668,2.33668:7.22297e-12,0.453397,0.546713
-chr1	4060377	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=4060396;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.997495:6,6:6-6,6-6:12,10,0,6:6,12:4,3|5,2|6,1:184.752:366.612,131.36:0.0,0.0:0.0,0.000218626,0.999782	0/0:31:0.999979:5,5:5-5,5-5:18,10,0,3:5,18:3,2|4,1:185.131:326.675,113.385:0.0,0.0:0.0,1.62247e-05,0.999986
-chr1	4063131	.	CACACACACACACA	.	.	.	END=4063144;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:7,7:7-8,7-8:20,17,0,5:7,20:5,2|6,3:266.987:366.612,131.36:0.195027,0.195027:2.772e-42,2.99005e-06,1.0	0/0:38:1.0:7,7:7-7,7-7:24,14,0,0:7,24:NULL:227.233:326.675,113.385:0.0,0.0:0.0,4.36936e-07,1.0
-chr1	4065627	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4065661;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.00001:5,5:5-5,5-5:21,8,0,4:5,21:3,2|4,2:183.106:366.612,131.36:0.0,0.0:1.0,1.37486e-06,0.0	1/0:31:0.954031:5,7:5-7,7-7:13,10,0,8:5,2|7,11:3,2|4,1|5,1|6,4:213.486:326.675,113.385:0.985733,0.0:5.22102e-30,0.954154,0.0459211
-chr1	4065673	.	AAACAAACAAACAAAC	.	.	.	END=4065688;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:20,12,0,2:4,20:3,2:202.169:366.612,131.36:0.0,0.0:0.0,2.97336e-06,1.0	0/0:27:1.0:4,4:4-4,4-4:21,6,0,0:4,21:NULL:139.16:326.675,113.385:0.0,0.0:0.0,3.96176e-06,0.999995
-chr1	4069662	.	ATTAATTAATTAATTAATTAATTA	.	.	.	END=4069685;RU=atta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.999628:6,6:6-6,6-6:15,1,0,0:6,15:NULL:68.9845:366.612,131.36:0.0,0.0:6.7e-44,0.000183829,0.999819	0/0:10:0.748805:6,6:6-6,6-6:5,5,0,0:6,5:NULL:66.1588:326.675,113.385:0.0,0.0:4.26125e-15,0.160237,0.839837
-chr1	4070485	.	ATATATATATATAT	.	.	.	END=4070498;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.915977:7,7:7-8,7-8:16,14,0,0:7,13|8,3:NULL:199.227:366.612,131.36:0.398507,0.398507:8.33491e-19,0.000217094,0.999787	0/0:14:0.987133:7,7:7-7,7-7:10,4,0,0:7,10:NULL:76.1992:326.675,113.385:0.0,0.0:6.28506e-12,0.00772012,0.992296
-chr1	4070608	.	GTTAGTTAGTTA	.	.	.	END=4070619;RU=gtta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.416:366.612,131.36:0.0,0.0:0.0,1.74971e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:31,5,0,2:3,31:2,2:183.313:326.675,113.385:0.0,0.0:0.0,1.47285e-09,1.0
-chr1	4086252	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=4086285;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:0.99982:13,13:13-13,13-13:24,18,0,11:12,3|13,21:6,1|7,1|8,2|9,1|10,2|11,2|12,2:360.267:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/0:35:0.998783:17,17:14-17,14-17:15,8,0,10:17,15:4,1|7,3|8,1|9,3|11,1|14,1:218.492:326.675,113.385:0.970701,0.970701:2.62421e-20,0.000455687,0.999546
-chr1	4088150	.	GTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4088169;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.994246:6,6:6-6,6-6:11,14,0,7:6,11:2,1|3,3|4,1|5,2:226.958:366.612,131.36:0.0,0.0:0.0,0.000958557,0.999044	0/0:69:1.0:5,5:5-5,5-5:34,27,0,8:5,34:2,1|4,7:447.005:326.675,113.385:0.0,0.0:0.0,3.86099e-10,1.0
-chr1	4090397	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4090442;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:41:0.269344:26,34:26-27,26-37:6,17,0,17:26,4|27,2:6,1|7,1|9,2|10,1|12,1|13,1|14,2|15,1|17,1|18,1|19,1|25,3|34,1:335.572:366.612,131.36:0.478127,3.78591:2.6192e-41,8.59452e-08,1.0	1/0:35:0.726241:22,23:21-23,23-23:11,5,0,17:21,2|22,3|23,6:6,2|7,1|8,2|12,2|13,1|14,2|16,1|20,2|21,3|22,1:238.146:326.675,113.385:0.754297,0.314035:7.48832e-05,0.783309,0.216657
-chr1	4091063	.	ACAACAACAACAACA	.	.	.	END=4091077;RU=aca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999691:5,5:5-5,5-5:15,11,0,0:5,15:NULL:159.729:366.612,131.36:0.0,0.0:2.7e-44,0.000197065,0.999804	0/0:42:1.0:5,5:5-5,5-5:25,14,0,3:5,25:4,3:249.245:326.675,113.385:0.0,0.0:0.0,7.75351e-08,1.0
-chr1	4095201	.	AAGGAAGGAAGG	.	.	.	END=4095212;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:24,19,0,4:3,24:2,4:291.104:366.612,131.36:0.0,0.0:0.0,1.63943e-07,1.0	0/0:23:0.999568:3,3:3-3,3-3:14,9,0,0:3,14:NULL:136.301:326.675,113.385:0.0,0.0:0.0,0.000262446,0.999742
-chr1	4095413	.	TTTGTTTGTTTGTTTG	.	.	.	END=4095428;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:24,11,0,2:4,24:3,2:208.474:366.612,131.36:0.0,0.0:0.0,2.60547e-07,1.0	0/0:33:0.999912:4,4:4-4,4-4:16,11,0,6:4,16:3,6:204.035:326.675,113.385:0.0,0.0:0.0,3.98243e-05,0.999963
-chr1	4100799	.	ATTTTATTTTATTTTATTTTATTTTATTTT	ATTTTATTTTATTTTATTTTATTTT	.	.	END=4100828;RU=atttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:5,5:5-5,5-5:28,11,0,0:5,28:NULL:216.446:366.612,131.36:0.314035,0.314035:1.0,1.76026e-08,0.0	0/0:30:0.999887:6,6:6-7,6-7:16,9,0,4:6,16:2,1|4,1|5,2:174.799:326.675,113.385:0.284901,0.284901:1.77483e-39,5.38703e-05,0.999948
-chr1	4101417	.	TGTTGTTGTTGTTGT	.	.	.	END=4101431;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999503:5,5:5-6,5-6:14,10,0,3:5,14:3,1|4,2:168.403:366.612,131.36:0.390807,0.390807:1.25007e-37,0.000219022,0.999782	0/0:24:0.999739:5,5:5-5,5-5:15,5,0,4:5,15:3,2|4,2:132.402:326.675,113.385:0.0,0.0:2.26489e-40,9.25796e-05,0.99991
-chr1	4107366	.	TATATATATATA	TATATATA	.	.	END=4107377;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999018:4,4:4-4,4-4:14,12,0,0:4,14:NULL:169.247:366.612,131.36:0.0,0.0:0.999828,0.000172148,0.0	0/0:25:0.999995:6,6:6-6,6-6:19,5,0,0:6,19:NULL:125.715:326.675,113.385:0.139319,0.139319:1.95623e-34,1.41815e-05,0.999987
-chr1	4112131	.	GCTGCTGCTGCT	.	.	.	END=4112142;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,16,0,2:4,23:3,2:252.469:366.612,131.36:0.0,0.0:0.0,5.36964e-07,1.0	0/0:22:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:102.343:326.675,113.385:0.0,0.0:0.0,1.31815e-05,0.999987
-chr1	4114636	.	CTATCTATCTAT	.	.	.	END=4114647;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:20,14,0,4:3,20:2,4:231.282:366.612,131.36:0.0,0.0:0.0,3.55721e-06,1.0	0/0:47:1.0:3,3:3-3,3-3:27,18,0,2:3,27:2,2:283.559:326.675,113.385:0.0,0.0:0.0,3.29652e-08,1.0
-chr1	4116064	.	CTCTCTCTCTCT	CTCTCTCTCT	.	.	END=4116075;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:5,5:5-5,5-5:29,12,0,0:5,29:NULL:225.742:366.612,131.36:0.0,0.0:1.0,1.27345e-08,0.0	0/0:32:0.999995:6,6:5-6,5-6:20,11,0,0:6,20:NULL:178.829:326.675,113.385:0.236383,0.236383:0.0,1.40272e-05,0.999987
-chr1	4119174	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4119245;RU=aaag;PERIOD=4;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0352826:14,14:14-18,14-18:0,9,0,0:NULL:NULL:85.5332:366.612,131.36:0.91647,0.91647:0.411079,0.463977,0.125045	0/0:26:0.407903:18,18:15-18,15-18:4,10,0,10:18,4:3,1|4,1|5,1|9,2|10,2|13,2|16,1:184.936:326.675,113.385:1.39643,1.39643:6.16298e-09,0.46418,0.535927
-chr1	4121252	.	TGTCTGTCTGTC	.	.	.	END=4121263;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:215.764:366.612,131.36:0.0,0.0:0.0,3.36844e-06,1.0	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:347.076:326.675,113.385:0.0,0.0:0.0,5.83131e-09,1.0
-chr1	4122075	.	AAATAAATAAAT	.	.	.	END=4122086;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999747:3,3:3-3,3-3:15,19,0,0:3,15:NULL:238.814:366.612,131.36:0.0,0.0:0.0,0.000190552,0.999811	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:181.442:326.675,113.385:0.0,0.0:0.0,3.61167e-07,1.0
-chr1	4122666	.	ATCTATCTATCT	.	.	.	END=4122677;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999583:3,3:3-3,3-3:15,18,0,2:3,15:2,2:240.054:366.612,131.36:0.0,0.0:0.0,0.000271211,0.999729	0/0:44:1.0:3,3:3-3,3-3:26,14,0,4:3,26:2,4:261.757:326.675,113.385:0.0,0.0:0.0,3.76513e-08,1.0
-chr1	4123576	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=4123599;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.00001:5,5:5-5,5-5:22,14,0,6:5,22:2,1|3,2|4,3:254.229:366.612,131.36:0.0,0.0:1.0,1.48473e-06,0.0	0/0:48:1.0:6,6:6-6,6-6:25,13,0,10:6,25:2,1|3,5|4,2|5,2:286.859:326.675,113.385:0.0,0.0:0.0,9.49871e-08,1.0
-chr1	4123957	.	TCTCTCTCTCTCTC	TCTCTCTCTCTC	.	.	END=4123970;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.00002:6,6:6-13,6-13:20,9,0,0:6,20:NULL:164.174:366.612,131.36:3.50358,3.50358:0.999993,1.07436e-05,6.70284e-33	0/0:38:1.0:7,7:7-7,7-7:27,10,0,0:7,27:NULL:209.815:326.675,113.385:0.0,0.0:9.8278e-36,1.16556e-07,1.0
-chr1	4129715	.	CTTTCTTTCTTT	.	.	.	END=4129726;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997594:3,3:3-3,3-3:12,14,0,0:3,12:NULL:170.303:366.612,131.36:0.0,0.0:2.2163e-40,0.00131315,0.998693	0/0:41:1.00001:3,3:3-3,3-3:20,16,0,5:3,20:2,5:263.411:326.675,113.385:0.0,0.0:0.0,3.28561e-06,1.0
-chr1	4129886	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4129913;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.997906:6,6:6-6,6-6:12,7,0,3:6,12:5,3:135.019:366.612,131.36:0.0,0.0:0.998541,0.00146427,3.03668e-26	0/0:59:1.0:7,7:7-7,7-7:29,19,0,10:7,29:2,2|3,3|4,1|5,1|6,3:361.213:326.675,113.385:0.0,0.0:0.0,9.64579e-09,1.0
-chr1	4129930	.	TTGTTGTTGTTG	.	.	.	END=4129941;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99999:4,4:4-4,4-4:18,9,0,2:4,18:3,2:165.39:366.612,131.36:0.0,0.0:0.0,1.34504e-05,0.999987	0/0:62:1.0:4,4:4-4,4-4:33,27,0,2:4,33:3,2:382.399:326.675,113.385:0.0,0.0:0.0,7.35907e-10,1.0
-chr1	4140418	.	TTTGTTTGTTTG	.	.	.	END=4140429;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:188.772:366.612,131.36:0.0,0.0:0.0,5.09731e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:204.552:326.675,113.385:0.0,0.0:0.0,8.95016e-06,0.999994
-chr1	4140449	.	TTTGGTTTGGTTTGG	.	.	.	END=4140463;RU=tttgg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:161.345:366.612,131.36:0.0,0.0:0.0,6.67801e-06,0.999994	0/0:28:0.999782:3,3:3-3,3-3:15,13,0,0:3,15:NULL:180.456:326.675,113.385:0.0,0.0:0.0,0.000169065,0.999834
-chr1	4142498	.	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	.	.	END=4142575;RU=cag;PERIOD=3;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.105745:27,27:26-28,26-28:0,20,0,17:NULL:6,1|8,1|14,1|15,1|16,1|17,2|18,1|19,2|20,1|21,1|22,1|23,1|25,1|27,2:318.949:366.612,131.36:0.964013,0.964013:3.46523e-16,0.372634,0.627414	0/0:62:0.673074:26,26:25-27,25-27:4,25,0,31:26,4:4,1|5,1|6,1|7,2|8,1|9,3|10,1|11,1|12,1|13,2|14,2|15,1|17,1|18,1|19,1|20,2|21,1|22,3|23,1|24,2|25,2:482.865:326.675,113.385:0.678922,0.678922:1.65866e-07,0.112299,0.887802
-chr1	4144308	.	TTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=4144334;RU=ttg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999524:10,10:8-11,8-11:15,11,0,2:10,15:6,1|9,1:179.861:366.612,131.36:0.743036,0.743036:0.0,0.000188528,0.999812	0/0:48:1.0:9,9:9-9,9-9:28,12,0,8:9,28:3,2|5,1|6,1|7,3|8,1:286.039:326.675,113.385:0.0,0.0:0.0,1.41547e-08,1.0
-chr1	4144510	.	TTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTTTTGTT,TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	END=4144529;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:1.0:5,8:5-5,8-8:13,7,0,0:5,7|8,6:NULL:126.229:366.612,131.36:0.0,0.29703:0.0,4.58966e-24,1.0	0/0:53:0.993702:4,4:4-6,4-6:33,17,0,3:4,33:3,2|6,1:323.727:326.675,113.385:0.81164,0.81164:0.0,9.36676e-10,1.0
-chr1	4148898	.	TTTATTTTATTTTAT	.	.	.	END=4148912;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.419:366.612,131.36:0.0,0.0:0.0,6.91862e-06,0.999994	0/0:35:1.0:3,3:3-3,3-3:22,13,0,0:3,22:NULL:215.568:326.675,113.385:0.0,0.0:0.0,3.91503e-06,0.999995
-chr1	4153288	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=4153307;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.789864:5,5:5-5,5-5:5,19,0,2:5,5:3,2:210.391:366.612,131.36:0.19802,0.19802:1.59991e-17,0.15992,0.840154	0/0:45:1.00001:5,5:5-5,5-5:20,17,0,7:5,20:2,1|3,2|4,4:288.974:326.675,113.385:0.0990099,0.0990099:0.0,3.58766e-06,1.0
-chr1	4163090	.	ATTATTATTATT	.	.	.	END=4163101;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999898:4,4:4-4,4-4:16,17,0,3:4,16:3,3:235.259:366.612,131.36:0.0,0.0:0.0,4.16304e-05,0.999962	0/0:45:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:267.259:326.675,113.385:0.0,0.0:0.0,1.23235e-07,1.0
-chr1	4168643	.	TTTATTTATTTA	.	.	.	END=4168654;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:240.263:366.612,131.36:0.0,0.0:0.0,1.01644e-10,1.0	0/0:35:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:217.241:326.675,113.385:0.0,0.0:0.0,7.03676e-06,0.999994
-chr1	4173459	.	ATTTATTTATTTATTT	.	.	.	END=4173474;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:21,17,0,2:4,21:3,2:258.487:366.612,131.36:0.0,0.0:0.0,4.15327e-06,0.999995	0/0:25:0.997971:4,4:4-4,4-4:12,9,0,4:4,12:3,4:159.204:326.675,113.385:0.0,0.0:3.14464e-38,0.000692925,0.99931
-chr1	4185941	.	TTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=4185952;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.984525:4,4:4-4,4-4:9,7,0,3:4,9:2,1|3,2:127.34:366.612,131.36:0.0,0.0:0.0,0.0021856,0.997821	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:159.974:326.675,113.385:0.0,0.0:0.0,3.14951e-06,1.0
-chr1	4186148	.	TAAATAAATAAA	.	.	.	END=4186159;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.96708:3,3:3-3,3-3:8,14,0,0:3,8:NULL:160.325:366.612,131.36:0.0,0.0:3.57923e-27,0.0206187,0.979424	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:184.863:326.675,113.385:0.0,0.0:0.0,3.44099e-07,1.0
-chr1	4195196	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG	.	.	END=4195231;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.998545:8,8:8-8,8-8:13,16,0,11:8,13:4,1|5,4|6,2|7,4:285.784:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:45:0.512226:18,18:17-18,17-18:16,12,0,16:17,4|18,12:5,3|6,1|7,1|11,3|13,2|14,1|15,2|16,3:312.952:326.675,113.385:0.489674,0.489674:1.30546e-13,0.487717,0.512341
-chr1	4196255	.	TTTGTTTGTTTG	.	.	.	END=4196266;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:2-3,2-3:29,23,0,0:3,29:NULL:332.851:366.612,131.36:0.19802,0.19802:0.0,1.48593e-08,1.0	0/0:46:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:263.701:326.675,113.385:0.0,0.0:0.0,8.27065e-09,1.0
-chr1	4199614	.	AATTAATTAATT	.	.	.	END=4199625;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.998573:3,3:3-3,3-3:13,11,0,0:3,13:NULL:150.683:366.612,131.36:0.0,0.0:2.367e-42,0.000925454,0.99908	0/0:16:0.990811:3,3:3-3,3-3:10,6,0,0:3,10:NULL:89.9067:326.675,113.385:0.0,0.0:5.26693e-33,0.00436205,0.99565
-chr1	4201150	.	TAAATAAATAAA	.	.	.	END=4201161;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.664:366.612,131.36:0.0,0.0:0.0,3.7601e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:164.257:326.675,113.385:0.0,0.0:0.0,7.31605e-08,1.0
-chr1	4201564	.	AAACAAACAAAC	.	.	.	END=4201575;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:29,24,0,0:3,29:NULL:333.733:366.612,131.36:0.0,0.0:0.0,2.26288e-08,1.0	0/0:49:1.0:3,3:3-3,3-3:30,17,0,2:3,30:2,2:288.108:326.675,113.385:0.0,0.0:0.0,4.0014e-09,1.0
-chr1	4202537	.	AAATAAATAAAT	.	.	.	END=4202548;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999995:3,3:3-3,3-3:19,16,0,0:3,19:NULL:222.381:366.612,131.36:0.0,0.0:0.0,1.16407e-05,0.999987	0/0:34:1.0:3,3:3-3,3-3:23,9,0,2:3,23:2,2:186.422:326.675,113.385:0.0,0.0:0.0,3.56569e-07,1.0
-chr1	4208149	.	AACAAACAAACA	.	.	.	END=4208160;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999617:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.19:366.612,131.36:0.0,0.0:0.0,0.000186105,0.999818	0/0:30:0.999891:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.852:326.675,113.385:0.0,0.0:0.0,6.16608e-05,0.999941
-chr1	4212306	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=4212333;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999851:5,5:5-5,5-5:16,21,0,4:5,16:2,1|3,1|4,2:287.361:366.612,131.36:0.0,0.0:0.999971,3.26505e-05,6.2e-44	0/0:30:1.0:7,7:7-7,7-7:21,9,0,0:7,21:NULL:169.604:326.675,113.385:0.0,0.0:0.0,4.44128e-06,0.999995
-chr1	4215533	.	ATACATACATACATACATACATACATACATACATAC	ATACATACATACATACATACATACATACATACATACATAC	.	.	END=4215568;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.995602:10,10:9-10,9-10:11,19,0,18:10,11:2,1|3,2|4,4|5,2|6,4|7,2|8,2|9,1:355.453:366.612,131.36:0.323567,0.323567:1.31864e-37,0.00111544,0.99889	0/0:43:0.993646:9,9:9-9,9-9:11,13,0,19:9,11:3,3|4,3|5,2|6,3|7,5|8,3:308.544:326.675,113.385:0.0,0.0:2.63742e-21,0.00276035,0.997246
-chr1	4216566	.	TGGGTGGGTGGG	.	.	.	END=4216577;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:35,22,0,0:3,35:NULL:332.45:366.612,131.36:0.0,0.0:0.0,2.70489e-10,1.0	0/0:73:1.0:3,3:3-3,3-3:41,32,0,0:3,41:NULL:443.123:326.675,113.385:0.0,0.0:0.0,3.03466e-12,1.0
-chr1	4219533	.	ACCCACCCACCC	.	.	.	END=4219544;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.935437:3,3:3-3,3-3:7,10,0,0:3,7:NULL:119.381:366.612,131.36:0.0,0.0:1.49863e-20,0.0345989,0.965464	0/0:30:0.961038:3,3:3-3,3-3:8,22,0,0:3,8:NULL:225.816:326.675,113.385:0.0,0.0:2.78787e-23,0.0278937,0.972158
-chr1	4222234	.	TGATGATGATGA	.	.	.	END=4222245;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999847:4,4:4-4,4-4:16,11,0,0:4,16:NULL:165.48:366.612,131.36:0.0,0.0:0.0,0.000104117,0.999896	0/0:45:1.00001:4,4:4-4,4-4:20,21,0,4:4,20:3,4:302.025:326.675,113.385:0.0,0.0:0.0,3.68792e-06,1.0
-chr1	4239423	.	AAACAAACAAACAAACAAAC	.	.	.	END=4239442;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:5,5:5-5,5-5:26,16,0,4:5,26:2,1|3,2|4,1:279.305:366.612,131.36:0.0,0.0:0.0,6.7303e-08,1.0	0/0:44:1.00001:5,5:5-5,5-5:22,14,0,8:5,22:2,3|3,3|4,2:271.56:326.675,113.385:0.0,0.0:0.0,6.11487e-07,1.0
-chr1	4243137	.	TCTGTCTGTCTG	.	.	.	END=4243148;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:213.688:366.612,131.36:0.0,0.0:0.0,5.45651e-07,1.0	0/0:59:1.0:3,3:3-3,3-3:29,26,0,4:3,29:2,4:378.044:326.675,113.385:0.0,0.0:0.0,7.81909e-09,1.0
-chr1	4243659	.	TTGTTGTTGTTGTTG	.	.	.	END=4243673;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:5,5:5-5,5-5:31,21,0,2:5,31:4,2:327.119:366.612,131.36:0.0,0.0:0.0,1.94798e-09,1.0	0/0:48:1.0:5,5:5-5,5-5:38,6,0,3:5,38:4,3:224.836:326.675,113.385:0.0990099,0.0990099:0.0,1.20459e-11,1.0
-chr1	4244758	.	AACAACAACAAC	.	.	.	END=4244769;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:31,16,0,3:4,31:3,3:293.809:366.612,131.36:0.0,0.0:0.0,2.75083e-09,1.0	0/0:45:1.0:4,4:4-4,4-4:27,15,0,3:4,27:3,3:266.465:326.675,113.385:0.0,0.0:0.0,4.53214e-08,1.0
-chr1	4247940	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4247969;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:1.0:11,11:11-11,11-11:31,6,0,6:10,3|11,28:7,2|8,2|10,1|11,1:236.495:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/2:48:0.301817:15,19:15-15,15-20:20,10,0,17:14,2|15,18:5,2|6,1|7,1|9,1|10,5|11,1|12,1|14,4|19,1:327.643:326.675,113.385:0.0,2.03272:2.09358e-25,5.07357e-06,0.999995
-chr1	4261751	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4261794;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.487749:8,8:6-10,6-10:4,20,0,0:8,4:NULL:198.192:366.612,131.36:1.16916,1.16916:0.958826,0.0412442,5.35052e-12	0/0:27:0.982188:11,11:11-11,11-11:8,7,0,12:11,8:2,1|3,1|5,3|7,2|8,1|10,2|11,2:184.845:326.675,113.385:0.0,0.0:2.19061e-33,0.00320668,0.9968
-chr1	4269351	.	AAATAAATAAAT	.	.	.	END=4269362;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:320.916:366.612,131.36:0.0,0.0:0.0,8.01632e-08,1.0	0/0:54:1.0:3,3:3-3,3-3:40,12,0,2:3,40:2,2:283.617:326.675,113.385:0.0,0.0:0.0,6.96112e-12,1.0
-chr1	4275434	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACA	.	.	END=4275483;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:52:0.684601:20,21:19-22,19-22:10,18,0,23:19,3|20,3|21,4:7,1|8,3|10,1|11,3|12,1|13,2|14,1|15,2|16,2|17,1|18,1|19,4|20,1:401.399:366.612,131.36:0.840244,0.766416:0.999986,1.54866e-05,5.87923e-25	0/0:47:0.855347:25,25:24-26,24-26:13,10,0,22:24,3|25,10:6,2|7,1|8,3|9,1|10,2|14,1|15,1|16,2|17,1|18,1|20,1|21,3|22,2|23,1:332.119:326.675,113.385:0.579017,0.579017:1.34034e-09,0.14187,0.858217
-chr1	4275539	.	ATAATAATAATA	.	.	.	END=4275550;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999984:4,4:4-4,4-4:19,10,0,0:4,19:NULL:165.443:366.612,131.36:0.0,0.0:0.0,2.29498e-05,0.999979	0/0:33:1.0:4,4:4-4,4-4:26,7,0,0:4,26:NULL:164.927:326.675,113.385:0.0,0.0:0.0,1.25792e-07,1.0
-chr1	4281780	.	CAAACAAACAAA	.	.	.	END=4281791;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:290.686:366.612,131.36:0.0,0.0:0.0,3.08009e-09,1.0	0/0:53:1.0:3,3:3-3,3-3:38,15,0,0:3,38:NULL:284.782:326.675,113.385:0.0,0.0:0.0,2.32525e-11,1.0
-chr1	4285029	.	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	.	.	END=4285113;RU=gaagg;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.0829037:17,17:5-20,5-20:0,19,0,17:NULL:4,2|5,2|6,1|7,1|10,1|12,2|14,4|15,2|17,2:296.393:366.612,131.36:3.15082,3.15082:5.1637e-16,0.546962,0.453146	1/0:31:0.99898:10,17:5-17,17-17:5,9,0,16:10,2|17,3:3,1|4,1|5,1|6,1|10,2|11,1|12,3|13,2|15,3|16,1:234.259:326.675,113.385:3.27335,0.372309:2.04025e-06,1.0,7.76487e-37
-chr1	4285247	.	GGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGG	.	.	.	END=4285300;RU=gggaaaggggaagaaagg;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.996535:3,3:3-3,3-3:16,21,0,0:3,16:NULL:264.925:366.612,131.36:0.278639,0.278639:3.66962e-18,0.00345612,0.996551	0/0:34:0.999955:3,3:3-3,3-3:17,14,0,3:3,17:2,1|3,2:222.686:326.675,113.385:0.0,0.0:4.41303e-37,5.37061e-05,0.999948
-chr1	4285317	.	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG,GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	.	.	END=4285436;RU=gaaag;PERIOD=5;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:46:0.0760872:25,25:18-26,18-26:0,20,0,26:NULL:3,1|4,3|5,1|6,2|7,2|9,2|10,2|11,1|13,1|14,2|15,1|16,1|17,1|19,1|22,1|23,3|24,1:368.821:366.612,131.36:2.10326,2.10326:4.20639e-09,0.458576,0.541533	1/1:23:0.0290068:23,23:10-24,10-24:0,7,0,16:NULL:4,2|5,1|6,2|10,3|11,1|13,1|14,1|15,2|18,1|22,1|23,1:178.687:326.675,113.385:4.1875,4.1875:0.291361,0.614,0.094706
-chr1	4287727	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4287770;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.704682:22,22:21-23,21-23:10,14,0,14:21,4|22,6:5,1|7,2|11,1|12,2|13,1|15,2|19,3|20,1|22,1:291.615:366.612,131.36:0.558156,0.558156:2.0267e-13,0.266838,0.733165	1/0:38:0.78164:20,22:20-22,22-22:8,14,0,16:20,3|22,5:5,2|8,2|9,1|10,1|11,3|13,2|16,1|18,3|21,1:296.738:326.675,113.385:0.973726,0.0990099:1.1863e-05,0.889694,0.11039
-chr1	4288691	.	TATATATATATA	TATATATATATATATA	.	.	END=4288702;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.697637:8,8:8-9,8-9:5,3,0,0:8,5:NULL:50.136:366.612,131.36:0.452422,0.452422:1.82103e-14,0.0505904,0.949488	0/0:20:0.999868:6,6:6-8,6-8:17,2,0,0:6,17:NULL:89.5175:326.675,113.385:0.390054,0.390054:6.16941e-24,6.33034e-05,0.99994
-chr1	4290243	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4290302;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:41:0.889527:16,16:11-16,11-16:7,18,0,14:16,7:2,1|4,1|5,2|6,1|7,2|8,1|11,3|12,1|15,2:307.69:366.612,131.36:2.34317,2.34317:7.37063e-31,0.0402759,0.959793	1/1:33:0.994339:14,14:13-14,13-14:11,13,0,8:14,11:3,1|5,1|7,1|9,1|11,1|12,2|13,1:230.879:326.675,113.385:0.169767,0.169767:0.99755,0.00245547,3.53208e-13
-chr1	4290307	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4290346;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.535683:19,19:18-19,18-19:10,17,0,7:18,3|19,7:7,1|10,1|11,1|13,1|16,1|17,1|18,1:269.431:366.612,131.36:0.498011,0.498011:0.980544,0.0194926,2.83766e-07	0/0:29:0.727856:20,20:18-20,18-20:5,12,0,11:20,5:7,1|9,3|10,2|12,1|16,1|17,1|19,1|20,1:224.134:326.675,113.385:0.851255,0.851255:1.73201e-15,0.0946413,0.905458
-chr1	4292154	.	TGTGTGTGTGTGTG	.	.	.	END=4292167;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999993:7,7:7-7,7-7:28,19,0,6:6,2|7,26:4,1|5,2|6,3:336.129:366.612,131.36:0.0,0.0:0.0,1.02349e-05,0.999993	0/0:35:1.00001:7,7:7-7,7-7:22,11,0,0:7,22:NULL:184.467:326.675,113.385:0.139319,0.139319:4.9e-44,2.60359e-06,1.0
-chr1	4293061	.	ATTTATTTATTT	.	.	.	END=4293072;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:3,3:3-3,3-3:21,20,0,3:3,21:2,3:284.62:366.612,131.36:0.0,0.0:0.0,1.84527e-06,1.0	0/0:25:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:118.827:326.675,113.385:0.0,0.0:0.0,2.20646e-06,1.0
-chr1	4297521	.	AAATAAATAAAT	.	.	.	END=4297532;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:2-3,2-3:24,14,0,2:3,24:2,2:241.549:366.612,131.36:0.21692,0.21692:0.0,2.96497e-07,1.0	0/0:29:0.999683:3,3:3-3,3-3:14,12,0,3:3,14:2,3:188.508:326.675,113.385:0.0,0.0:0.0,0.000159458,0.999842
-chr1	4298525	.	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	.	.	END=4298564;RU=aggg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.324771:10,11:10-12,10-12:2,14,0,8:10,2:2,1|6,1|7,1|8,1|9,2|11,2:195.225:366.612,131.36:0.91978,0.752475:2.09996e-18,0.00323195,0.996777	0/0:18:0.445983:10,10:8-10,8-10:3,9,0,5:10,3:3,1|6,1|7,1|8,1|9,1:135.037:326.675,113.385:0.963606,0.963606:8.30868e-05,0.335561,0.664371
-chr1	4303708	.	GTTTGTTTGTTT	.	.	.	END=4303719;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99999:3,3:3-3,3-3:18,8,0,0:3,18:NULL:143.671:366.612,131.36:0.0,0.0:0.0,1.81234e-05,0.999985	0/0:47:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:254.878:326.675,113.385:0.0,0.0:0.0,7.89661e-10,1.0
-chr1	4304220	.	CTTCCTTCCTTC	.	.	.	END=4304231;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:244.536:366.612,131.36:0.0,0.0:0.0,2.37142e-06,1.0	0/0:38:0.999578:3,3:2-3,2-3:14,21,0,2:3,14:2,2:262.18:326.675,113.385:0.46122,0.46122:0.0,0.000264883,0.999736
-chr1	4304531	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=4304562;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.00001:7,7:5-7,5-7:22,22,0,8:7,22:3,2|4,2|5,3|6,1:353.905:366.612,131.36:0.410384,0.410384:1.0,1.43191e-06,1.3794e-39	0/0:47:1.00001:8,8:8-8,8-8:22,16,0,9:8,22:3,1|4,1|5,1|6,1|7,5:308.08:326.675,113.385:0.0,0.0:0.0,7.07656e-07,1.0
-chr1	4305067	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4305100;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0445602:29,29:12-31,12-31:0,14,0,14:NULL:5,3|7,1|8,1|9,1|11,2|16,1|17,1|20,1|27,1|28,1|29,1:235.738:366.612,131.36:4.68217,4.68217:2.11204e-37,0.105213,0.894887	0/0:26:0.728765:17,17:16-19,16-19:5,9,0,10:17,5:7,1|9,1|12,1|13,1|15,4|16,2:182.064:326.675,113.385:1.0865,1.0865:3.43413e-08,0.073556,0.926541
-chr1	4307140	.	AATAAAATAAAATAA	.	.	.	END=4307154;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:25,18,0,2:3,25:2,2:272.688:366.612,131.36:0.0,0.0:0.0,9.41783e-08,1.0	0/0:27:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:138.153:326.675,113.385:0.0,0.0:0.0,2.24604e-06,1.0
-chr1	4307673	.	TTGTTGTTGTTG	.	.	.	END=4307684;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:231.194:366.612,131.36:0.0,0.0:0.0,1.69388e-06,1.0	0/0:40:1.0:4,4:3-4,3-4:26,13,0,0:4,26:NULL:228.879:326.675,113.385:0.195027,0.195027:0.0,1.37826e-07,1.0
-chr1	4309252	.	TTTGTTTGTTTGTTTG	.	.	.	END=4309267;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:20,16,0,3:4,20:3,3:246.126:366.612,131.36:0.0,0.0:0.0,2.00039e-06,1.0	0/0:49:1.0:4,4:4-4,4-4:35,9,0,5:4,35:2,3|3,2:261.591:326.675,113.385:0.0,0.0:0.0,1.11506e-10,1.0
-chr1	4312047	.	AATAATAATAAT	AAT	.	.	END=4312058;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0756969:1,1:1-4,1-4:0,18,0,0:NULL:NULL:166.744:366.612,131.36:1.15812,1.15812:0.566582,0.379435,0.0541254	0/0:23:0.999633:4,4:4-4,4-4:15,8,0,0:4,15:NULL:131.449:326.675,113.385:0.0,0.0:0.0,0.000241621,0.999759
-chr1	4315806	.	TTTATTTATTTA	.	.	.	END=4315817;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:18,13,0,0:3,18:NULL:189.952:366.612,131.36:0.0,0.0:0.0,1.03387e-05,0.999993	0/0:16:0.961691:3,3:3-3,3-3:8,8,0,0:3,8:NULL:104.974:326.675,113.385:0.0,0.0:2.31783e-26,0.0214061,0.978636
-chr1	4318869	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	END=4318923;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.998032:7,7:7-7,7-7:13,11,0,0:7,13:NULL:155.431:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.997389:11,11:11-11,11-11:11,11,0,11:11,11:3,1|5,1|8,1|9,3|10,5:224.136:326.675,113.385:0.0,0.0:3.92039e-33,0.00105901,0.998945
-chr1	4328602	.	GTGGGTGGGTGGGTGG	.	.	.	END=4328617;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:4,4:4-4,4-4:27,29,0,0:4,27:NULL:356.43:366.612,131.36:0.0,0.0:0.0,9.63734e-08,1.0	0/0:38:1.0:4,4:4-4,4-4:22,16,0,0:4,22:NULL:233.942:326.675,113.385:0.0,0.0:0.0,4.15676e-06,0.999995
-chr1	4328704	.	ATAAATAAATAA	.	.	.	END=4328715;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:36,14,0,0:3,36:NULL:264.255:366.612,131.36:0.0,0.0:0.0,1.35046e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:197.266:326.675,113.385:0.0,0.0:0.0,6.85972e-06,0.999994
-chr1	4329272	.	TGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=4329291;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.999961:5,5:5-5,5-5:17,12,0,0:5,17:NULL:178.516:366.612,131.36:0.0,0.0:0.0,3.54679e-05,0.999964	0/0:29:0.999204:4,4:3-4,3-4:13,11,0,4:4,13:3,4:178.448:326.675,113.385:0.40582,0.40582:6.01e-43,0.000413943,0.99959
-chr1	4329605	.	GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	GGAAGGGAAGGGAAGGGAAG,GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	.	.	END=4329684;RU=ggaag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00451592:4,4:1-5,1-5:0,6,0,0:NULL:NULL:50.7807:366.612,131.36:1.38953,1.38953:0.539407,0.424989,0.0357611	2/2:1:0.000317116:17,17:17-17,17-17:0,1,0,0:NULL:NULL:8.30332:326.675,113.385:0.0,0.0:0.0516048,0.397132,0.551422
-chr1	4331004	.	AGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4331017;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0229887:22,22:21-24,21-24:0,8,0,3:NULL:6,1|8,1|20,1:96.2491:366.612,131.36:1.14911,1.14911:0.0,0.0,1.0	0/0:29:0.997633:7,7:7-8,7-8:13,15,0,0:7,13:NULL:187.971:326.675,113.385:0.437216,0.437216:1.60787e-27,0.00151059,0.998496
-chr1	4331408	.	TATTATTATTATTATTAT	TAT	.	.	END=4331425;RU=tat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0117972:1,1:1-4,1-4:0,8,0,0:NULL:NULL:78.2954:366.612,131.36:1.13848,1.13848:0.184507,0.538962,0.276614	0/0:20:0.99739:6,6:6-6,6-6:12,6,0,2:6,12:3,1|5,1:120.743:326.675,113.385:0.0,0.0:3.27621e-34,0.00136058,0.998642
-chr1	4365108	.	TCTTTCTTTCTT	.	.	.	END=4365119;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:35,23,0,0:3,35:NULL:349.875:366.612,131.36:0.0,0.0:0.0,2.82414e-10,1.0	0/0:36:1.0:3,3:3-3,3-3:20,13,0,3:3,20:2,3:223.14:326.675,113.385:0.0,0.0:0.0,5.17857e-06,0.999995
-chr1	4367608	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4367649;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:55:0.966374:21,24:20-22,24-24:23,17,0,13:20,2|21,6|22,3|23,3|24,9:6,3|9,1|12,1|16,1|18,1|19,3|20,2|21,1:391.52:366.612,131.36:0.456091,0.0990099:4.87875e-38,1.21687e-06,1.0	0/0:40:0.95915:21,21:11-21,11-21:14,8,0,16:20,3|21,11:10,1|12,1|13,1|14,1|16,2|17,2|19,5|20,3:271.685:326.675,113.385:4.35711,4.35711:1.72038e-11,0.0372044,0.962863
-chr1	4368385	.	CAAACAAACAAACAAA	.	.	.	END=4368400;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999479:4,4:4-4,4-4:14,19,0,2:4,14:3,2:242.427:366.612,131.36:0.0,0.0:0.0,0.000338708,0.999666	0/0:36:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:211.969:326.675,113.385:0.0,0.0:0.0,2.97353e-06,1.0
-chr1	4376870	.	AAATAAAATAAAATA	.	.	.	END=4376884;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999929:3,3:3-3,3-3:17,12,0,0:3,17:NULL:177.043:366.612,131.36:0.0,0.0:0.0,3.89198e-05,0.999963	0/0:16:0.930548:3,3:3-3,3-3:7,9,0,0:3,7:NULL:110.478:326.675,113.385:0.19802,0.19802:1.82652e-23,0.0449047,0.955169
-chr1	4380706	.	ATATACTATACATATACTATACATATACTATAC	ATATACTATAC	.	.	END=4380738;RU=atatactatac;PERIOD=11;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.685505:1,1:1-1,1-1:0,27,0,0:NULL:NULL:261.91:366.612,131.36:0.0,0.0:0.856769,0.140636,0.00268363	0/0:12:0.922507:3,3:3-3,3-3:7,5,0,0:3,7:NULL:74.7609:326.675,113.385:0.0,0.0:1.98248e-09,0.047239,0.952838
-chr1	4381338	.	CTTTCTTTCTTT	.	.	.	END=4381349;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99978:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.896:366.612,131.36:0.0,0.0:0.0,0.000123774,0.999879	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.07:326.675,113.385:0.0,0.0:0.0,8.56297e-08,1.0
-chr1	4383095	.	AAAATAAAATAAAATAAAAT	AAAAT	.	.	END=4383114;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0611241:1,1:1-4,1-4:0,7,0,0:NULL:NULL:62.4723:366.612,131.36:1.40706,1.40706:0.350436,0.489755,0.159858	0/0:22:0.999977:4,4:4-4,4-4:18,4,0,0:4,18:NULL:110.196:326.675,113.385:0.0,0.0:0.0,2.68047e-05,0.999972
-chr1	4388234	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=4388268;RU=ttttg;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999706:5,5:4-5,4-5:15,16,0,5:5,15:2,2|3,2|4,1:243.899:366.612,131.36:0.236383,0.236383:0.999948,5.32144e-05,3.0148e-41	0/0:31:0.99907:7,7:6-7,6-7:13,7,0,10:7,13:2,2|3,3|6,5:184.792:326.675,113.385:0.390807,0.390807:2.42909e-35,0.000341891,0.999659
-chr1	4389924	.	AAACAAACAAAC	.	.	.	END=4389935;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:20,18,0,0:3,20:NULL:238.624:366.612,131.36:0.0,0.0:0.0,3.72101e-06,1.0	0/0:26:0.999743:3,3:3-3,3-3:15,11,0,0:3,15:NULL:155.687:326.675,113.385:0.0,0.0:0.0,0.000163545,0.999841
-chr1	4390516	.	GAGAAGAGAGAAGAGAGAAGA	GAGAAGA	.	.	END=4390536;RU=gagaaga;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.112712:1,1:1-2,1-2:0,16,0,0:NULL:NULL:147.878:366.612,131.36:0.491073,0.491073:0.419702,0.473992,0.106424	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:223.091:326.675,113.385:0.0,0.0:0.0,1.10314e-07,1.0
-chr1	4391542	.	TAAATAAATAAA	.	.	.	END=4391553;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.996426:3,3:3-4,3-4:12,20,0,0:3,12:NULL:236.309:366.612,131.36:0.495841,0.495841:2.13451e-37,0.00220599,0.997799	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:223.19:326.675,113.385:0.0,0.0:0.0,5.08592e-07,1.0
-chr1	4391556	.	AACAACAACAAC	AACAACAACAACAAC	.	.	END=4391567;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.849097:5,5:4-5,4-5:17,19,0,0:4,3|5,14:NULL:257.578:366.612,131.36:0.486863,0.486863:0.0,7.64905e-05,0.999925	0/0:37:1.0:4,4:4-4,4-4:19,14,0,4:4,19:3,4:235.756:326.675,113.385:0.0,0.0:0.0,6.8877e-06,0.999994
-chr1	4394196	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=4394211;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999904:5,5:5-5,5-5:16,11,0,3:5,16:3,1|4,2:192.136:366.612,131.36:0.0,0.0:0.0,2.63456e-05,0.999978	0/0:30:1.00001:4,4:4-4,4-4:20,7,0,3:4,20:2,1|3,2:171.045:326.675,113.385:0.0,0.0:0.0,3.13178e-06,1.0
-chr1	4399750	.	GAACAGAACAGAACA	.	.	.	END=4399764;RU=gaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,16,0,0:3,23:NULL:241.427:366.612,131.36:0.0,0.0:0.0,1.09336e-06,1.0	0/0:28:0.999941:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.316:326.675,113.385:0.0,0.0:0.0,5.14948e-05,0.999949
-chr1	4404415	.	ACCACCACCACCACC	.	.	.	END=4404429;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:22,17,0,4:5,22:3,1|4,3:280.212:366.612,131.36:0.0,0.0:0.0,2.68116e-07,1.0	0/0:35:1.00001:5,5:5-5,5-5:22,11,0,2:5,22:3,1|4,1:204.569:326.675,113.385:0.0,0.0:0.0,1.20117e-06,1.0
-chr1	4413710	.	ATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATAC	.	.	.	END=4413789;RU=atagatac;PERIOD=8;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.166102:10,10:5-10,5-10:2,12,0,8:10,2:2,1|4,4|6,1|7,1|8,1:170.496:366.612,131.36:1.1234,1.1234:5.66557e-06,0.721365,0.27863	0/0:31:0.93962:10,10:10-10,10-10:7,8,0,16:10,7:2,1|3,2|4,1|5,2|6,2|7,4|8,3|9,1:209.782:326.675,113.385:0.0,0.0:9.99768e-20,0.0315962,0.968463
-chr1	4416214	.	AGACAGACAGAC	.	.	.	END=4416225;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.042:366.612,131.36:0.0,0.0:0.0,4.45306e-06,0.999995	0/0:44:1.00001:3,3:3-3,3-3:20,21,0,3:3,20:2,3:296.935:326.675,113.385:0.0,0.0:0.0,2.77719e-06,1.0
-chr1	4417332	.	CATGCATGCATG	.	.	.	END=4417343;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:217.251:366.612,131.36:0.0,0.0:0.0,7.47455e-06,0.999994	0/0:26:0.999984:3,3:3-3,3-3:18,8,0,0:3,18:NULL:147.202:326.675,113.385:0.0,0.0:0.0,2.16373e-05,0.999979
-chr1	4423050	.	TAATTTAATTTAATT	.	.	.	END=4423064;RU=taatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.996592:3,3:3-3,3-3:11,10,0,0:3,11:NULL:135.921:366.612,131.36:0.0,0.0:4.76551e-36,0.00230319,0.997701	0/0:14:0.981437:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.535:326.675,113.385:0.0,0.0:2.28684e-29,0.00902879,0.990993
-chr1	4423239	.	CACACACACACA	CACACACACACACA	.	.	END=4423250;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999994:7,7:7-7,7-7:19,11,0,0:7,19:NULL:174.886:366.612,131.36:0.0,0.0:0.0,8.04436e-06,0.999994	0/0:29:1.00001:6,6:6-6,6-6:23,2,0,4:6,23:5,4:138.927:326.675,113.385:0.0,0.0:0.0,3.36608e-07,1.0
-chr1	4425083	.	CCACCACCACCACCACCA	CCA	.	.	END=4425100;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.108716:1,1:1-1,1-1:0,27,0,0:NULL:NULL:244.089:366.612,131.36:0.139319,0.139319:0.66748,0.30592,0.0266397	0/0:55:1.0:6,6:6-6,6-6:29,20,0,5:6,29:5,5:334.155:326.675,113.385:0.0,0.0:0.0,6.39426e-09,1.0
-chr1	4426093	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4426130;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.271415:27,30:27-28,27-32:3,14,0,12:27,3:7,2|8,1|9,1|10,1|14,1|16,1|17,1|23,1|26,2|29,1:245.354:366.612,131.36:0.537761,1.20589:0.0,0.0,1.0	0/3:37:0.283368:19,34:19-19,19-34:15,9,0,10:18,3|19,12:8,1|12,1|13,1|15,1|16,1|18,3|19,1|32,1:249.377:326.675,113.385:0.0,6.86953:1.57146e-22,1.97878e-05,0.99998
-chr1	4426860	.	AAACAAACAAAC	.	.	.	END=4426871;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999805:3,3:3-3,3-3:15,17,0,0:3,15:NULL:216.953:366.612,131.36:0.0,0.0:0.0,8.43516e-05,0.999918	0/0:22:0.999963:3,3:3-3,3-3:17,5,0,0:3,17:NULL:118.047:326.675,113.385:0.0,0.0:0.0,3.00444e-05,0.999971
-chr1	4429409	.	CCACCACCACCA	.	.	.	END=4429420;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:30,17,0,0:4,30:NULL:267.832:366.612,131.36:0.0,0.0:0.0,8.387e-09,1.0	0/0:42:1.0:4,4:4-4,4-4:29,12,0,0:4,29:NULL:225.644:326.675,113.385:0.139319,0.139319:0.0,2.04925e-08,1.0
-chr1	4429719	.	GTGTGTGTGTGT	GTGTGTGT	.	.	END=4429730;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.990269:4,4:4-6,4-6:11,18,0,0:4,11:NULL:206.913:366.612,131.36:0.863148,0.863148:0.997246,0.00275907,6.92527e-21	0/0:25:0.999978:6,6:6-6,6-6:19,6,0,0:6,19:NULL:131.122:326.675,113.385:0.0,0.0:6.31465e-34,1.52283e-05,0.999986
-chr1	4429733	.	GAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=4429752;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.979729:8,8:8-8,8-8:10,13,0,0:8,10:NULL:160.169:366.612,131.36:0.139319,0.139319:0.99593,0.00407977,1.80434e-17	0/0:32:0.955031:10,10:10-11,10-11:21,8,0,3:10,18|11,3:5,1|8,1|9,1:192.258:326.675,113.385:0.412766,0.412766:3.22241e-26,5.15855e-06,0.999995
-chr1	4430764	.	ATGAATGAATGAATGAATGAATGAATGAATGA	ATGAATGAATGAATGAATGAATGAATGAATGAATGA	.	.	END=4430795;RU=atga;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999375:9,9:9-9,9-9:14,15,0,11:9,14:2,1|3,1|4,1|5,2|6,1|7,1|8,4:274.613:366.612,131.36:0.0,0.0:0.0,2.02402e-05,0.99998	0/0:31:1.0:8,8:8-8,8-8:19,6,0,6:8,19:2,1|3,1|7,4:179.494:326.675,113.385:0.0,0.0:0.0,4.54047e-06,0.999995
-chr1	4434303	.	TATATATATATA	TATATATATATATATATA,TATATATATATATATATATATATA	.	.	END=4434314;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.974761:9,12:9-13,12-12:12,13,0,0:9,2|12,10:NULL:177.35:366.612,131.36:1.49377,0.0:0.0,0.0,1.0	0/0:25:0.916793:6,6:5-7,5-7:7,14,0,2:6,7:5,2:175.812:326.675,113.385:0.531343,0.531343:4.91889e-09,0.0459664,0.954107
-chr1	4435269	.	CAATCAATCAAT	.	.	.	END=4435280;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:228.273:366.612,131.36:0.0,0.0:0.0,4.80746e-07,1.0	0/0:32:0.999981:3,3:3-3,3-3:18,12,0,2:3,18:2,2:189.296:326.675,113.385:0.0,0.0:0.0,1.38634e-05,0.999987
-chr1	4448845	.	CTGCCTGCCTGC	.	.	.	END=4448856;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999965:3,3:3-3,3-3:17,22,0,4:3,17:2,4:297.44:366.612,131.36:0.0,0.0:0.0,1.88329e-05,0.999985	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:162.143:326.675,113.385:0.0,0.0:0.0,1.34186e-06,1.0
-chr1	4449017	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4449072;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:51:0.914811:15,16:15-15,15-16:10,21,0,20:15,8|16,2:2,2|3,1|4,1|5,2|7,2|9,2|10,1|12,3|13,2|14,3|15,1:398.823:366.612,131.36:0.0,0.491073:0.0,4.19426e-05,0.999957	0/0:47:0.968477:14,14:11-15,11-15:8,18,0,19:14,8:2,1|3,3|4,1|6,3|7,1|8,2|9,2|10,1|12,2|13,3:341.121:326.675,113.385:1.35177,1.35177:1.51877e-16,0.0150207,0.985009
-chr1	4450115	.	ATATATATATAT	ATATATATAT	.	.	END=4450126;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:21:1.0:5,6:4-5,5-7:11,8,0,0:5,5|6,6:NULL:122.639:366.612,131.36:0.342408,0.372309:1.28879e-08,1.0,4.9555e-08	0/0:31:0.997716:6,6:5-6,5-6:13,17,0,0:6,13:NULL:201.31:326.675,113.385:0.334882,0.334882:6.22094e-24,0.00170779,0.998299
-chr1	4451210	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4451261;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:46:0.632992:22,26:22-28,26-28:15,11,0,19:21,2|22,4|24,3|26,6:6,1|8,1|9,1|11,1|12,2|14,1|18,2|19,1|20,1|21,3|22,3|23,1|28,1:360.671:366.612,131.36:2.73257,1.06305:6.07213e-07,0.865972,0.134122	0/2:45:0.887578:26,27:11-27,11-27:10,11,0,22:25,3|26,4|27,3:5,3|6,1|7,1|8,1|9,2|14,1|16,1|19,3|20,2|22,2|23,2|24,3:331.719:326.675,113.385:5.24564,6.06172:5.90559e-07,0.101421,0.898681
-chr1	4451385	.	TTGTTTTGTTTTGTT	.	.	.	END=4451399;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:21,31,0,0:3,21:NULL:354.695:366.612,131.36:0.0,0.0:0.0,5.06123e-06,0.999995	0/0:35:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.192:326.675,113.385:0.0,0.0:0.0,1.28186e-05,0.999987
-chr1	4451409	.	TCTGTCTGTCTG	.	.	.	END=4451420;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,27,0,0:3,29:NULL:353.468:366.612,131.36:0.0,0.0:0.0,2.236e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:233.131:326.675,113.385:0.0,0.0:0.0,1.73914e-07,1.0
-chr1	4453062	.	GGAGGGAGGGAG	.	.	.	END=4453073;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.998932:3,3:3-3,3-3:14,24,0,0:3,14:NULL:276.614:366.612,131.36:0.0,0.0:0.0,0.000780357,0.999225	0/0:36:1.00001:3,3:3-3,3-3:21,13,0,2:3,21:2,2:214.931:326.675,113.385:0.0,0.0:0.0,1.49998e-06,1.0
-chr1	4454884	.	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	.	.	END=4454995;RU=cctgctg;PERIOD=7;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:54:0.777954:6,16:6-13,12-16:6,24,0,18:6,2|10,2|14,2:2,1|3,2|5,4|6,1|7,1|8,1|10,1|11,1|12,3|13,1|16,2:417.147:366.612,131.36:1.93807,1.59992:3.3098e-10,1.0,1.04847e-27	2/3:59:0.999114:14,19:10-16,3-21:10,21,1,24:10,3|14,3|16,4:2,2|3,3|4,1|5,1|6,1|9,1|11,2|12,2|13,1|14,5|15,4|16,1:535.961:326.675,113.385:2.21278,4.46079:0.0,1.0,2.26331e-06
-chr1	4461472	.	GAAGGGAAGGGAAGGGAAGG	GAAGG	.	.	END=4461491;RU=gaagg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.00377504:1,1:1-5,1-5:0,3,0,0:NULL:NULL:26.5218:366.612,131.36:0.780108,0.780108:0.0267453,0.388297,0.585074	0/0:40:1.0:4,4:4-4,4-4:24,13,0,3:4,24:3,3:239.676:326.675,113.385:0.0,0.0:0.0,2.98127e-07,1.0
-chr1	4462221	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4462246;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0549007:24,24:24-26,24-26:0,11,0,8:NULL:4,1|5,1|10,1|13,1|15,1|20,1|24,2:161.879:366.612,131.36:0.592738,0.592738:0.0,0.0,1.0	0/0:47:0.646146:13,13:13-17,13-17:27,12,0,8:12,2|13,23|14,2:8,1|9,2|10,2|11,1|12,1|17,1:311.76:326.675,113.385:1.82404,1.82404:2.00885e-34,2.38216e-06,1.0
-chr1	4467043	.	ATAAATAAATAA	.	.	.	END=4467054;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999958:3,3:3-3,3-3:17,21,0,2:3,17:2,2:278.905:366.612,131.36:0.0,0.0:0.0,3.44744e-05,0.999965	0/0:35:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.454:326.675,113.385:0.0,0.0:0.0,1.14046e-05,0.999988
-chr1	4467845	.	TTGTTTGTTTGTTTGT	.	.	.	END=4467860;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.953266:4,4:4-4,4-4:7,10,0,4:4,7:3,4:149.755:366.612,131.36:0.0,0.0:5.79576e-24,0.019206,0.980836	0/0:32:0.99997:4,4:4-4,4-4:18,14,0,0:4,18:NULL:199.375:326.675,113.385:0.0,0.0:0.0,3.81478e-05,0.999964
-chr1	4468187	.	ATCATCATCATC	.	.	.	END=4468198;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:23,11,0,2:4,23:3,2:207.549:366.612,131.36:0.0,0.0:0.0,5.2263e-07,1.0	0/0:37:1.00001:4,4:4-4,4-4:22,15,0,0:4,22:NULL:227.915:326.675,113.385:0.0,0.0:0.0,3.11186e-06,1.0
-chr1	4469245	.	CACACACACACACACACA	.	.	.	END=4469262;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:9,9:9-9,9-9:26,11,0,3:9,26:7,1|8,2:236.579:366.612,131.36:0.19802,0.19802:4.37e-43,1.08494e-07,1.0	0/0:47:1.00001:9,9:9-9,9-9:21,20,0,5:9,21:5,1|6,1|8,3:310.661:326.675,113.385:0.0,0.0:3.32615e-35,1.90036e-06,1.0
-chr1	4471019	.	AGCCAGCCAGCC	.	.	.	END=4471030;RU=agcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,12,0,2:3,20:2,2:201.95:366.612,131.36:0.0,0.0:0.0,2.25541e-06,1.0	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:224.631:326.675,113.385:0.0,0.0:0.0,6.74975e-07,1.0
-chr1	4472443	.	TGTGTGTGTGTGTG	.	.	.	END=4472456;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999899:7,7:7-7,7-7:17,14,0,0:7,17:NULL:202.743:366.612,131.36:0.0,0.0:5.0226e-40,6.89604e-05,0.999933	0/0:38:1.0:7,7:7-7,7-7:23,11,0,4:7,23:5,2|6,2:226.914:326.675,113.385:0.0,0.0:0.0,3.91387e-07,1.0
-chr1	4473588	.	TTTGTTTGTTTG	.	.	.	END=4473599;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:267.43:366.612,131.36:0.0,0.0:0.0,8.19186e-09,1.0	0/0:45:1.0:3,3:3-3,3-3:29,13,0,3:3,29:2,3:253.947:326.675,113.385:0.0,0.0:0.0,6.24976e-09,1.0
-chr1	4475372	.	GTTGGTTGGTTG	.	.	.	END=4475383;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:0.999993:3,3:3-3,3-3:19,31,0,0:3,19:NULL:352.768:366.612,131.36:0.0,0.0:0.0,1.81628e-05,0.999985	0/0:58:1.0:3,3:3-3,3-3:24,32,0,2:3,24:2,2:399.093:326.675,113.385:0.0,0.0:0.0,6.3523e-07,1.0
-chr1	4475462	.	TGGTTGGTTGGT	.	.	.	END=4475473;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999904:3,3:3-3,3-3:17,28,0,0:3,17:NULL:328.445:366.612,131.36:0.0,0.0:0.0,9.22666e-05,0.99991	0/0:44:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:294.213:326.675,113.385:0.0,0.0:0.0,5.04333e-06,0.999995
-chr1	4476345	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	END=4476384;RU=ggaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999495:9,9:9-9,9-9:14,12,0,4:9,14:3,1|8,3:203.82:366.612,131.36:0.0,0.0:0.999667,0.000333038,6.32498e-26	0/0:31:0.996083:10,10:10-10,10-10:11,10,0,10:10,11:2,1|5,1|7,2|9,6:209.801:326.675,113.385:0.0,0.0:2.03327e-31,0.0011957,0.998808
-chr1	4476816	.	CCCTCCCTCCCTCCCT	CCCTCCCTCCCT	.	.	END=4476831;RU=ccct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.153545:3,3:2-4,2-4:0,21,0,3:NULL:3,3:212.852:366.612,131.36:0.46881,0.46881:0.281163,0.517279,0.201561	0/0:23:0.966917:4,4:4-4,4-4:9,14,0,0:4,9:NULL:168.071:326.675,113.385:0.0,0.0:6.6534e-14,0.0255635,0.974488
-chr1	4477626	.	TAAATAAATAAA	.	.	.	END=4477637;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:27,20,0,0:3,27:NULL:295.899:366.612,131.36:0.0,0.0:0.0,9.2065e-08,1.0	0/0:38:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:197.046:326.675,113.385:0.0,0.0:0.0,1.8844e-08,1.0
-chr1	4490091	.	AACAACAACAACAACAACAAC	.	.	.	END=4490111;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99516:7,7:7-7,7-7:11,8,0,3:7,11:3,1|4,1|6,1:138.756:366.612,131.36:0.0,0.0:4.41312e-30,0.00219522,0.997813	0/0:25:0.999329:7,7:7-7,7-7:14,8,0,3:7,14:4,1|5,1|6,1:155.084:326.675,113.385:0.0,0.0:4.45758e-38,0.000267166,0.999735
-chr1	4491987	.	TGCTGCTGCTGC	.	.	.	END=4491998;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999887:4,4:4-4,4-4:17,20,0,0:4,17:NULL:250.469:366.612,131.36:0.0,0.0:0.0,8.49653e-05,0.999917	0/0:29:0.999976:4,4:4-4,4-4:18,11,0,0:4,18:NULL:174.657:326.675,113.385:0.0,0.0:0.0,3.28594e-05,0.99997
-chr1	4500015	.	ATAATAATAATA	.	.	.	END=4500026;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:27,28,0,0:4,27:NULL:370.374:366.612,131.36:0.0,0.0:0.0,1.39988e-07,1.0	0/0:38:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:226.75:326.675,113.385:0.0,0.0:0.0,2.00146e-06,1.0
-chr1	4500558	.	ACATACATACAT	.	.	.	END=4500569;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:264.928:366.612,131.36:0.0990099,0.0990099:0.0,4.35992e-10,1.0	0/0:25:0.99975:3,3:3-3,3-3:15,10,0,0:3,15:NULL:153.146:326.675,113.385:0.0,0.0:3.50738e-38,0.000171094,0.999833
-chr1	4500614	.	AATAAATAAATA	.	.	.	END=4500625;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999964:3,3:3-3,3-3:18,11,0,0:3,18:NULL:177.338:366.612,131.36:0.0,0.0:0.0,3.26547e-05,0.999971	0/0:25:0.999519:3,3:3-3,3-3:14,11,0,0:3,14:NULL:157.545:326.675,113.385:0.0,0.0:1.93e-43,0.000309201,0.999691
-chr1	4501653	.	GTAGTAGTAGTAGTA	.	.	.	END=4501667;RU=gta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:5-5,5-5:21,11,0,0:5,21:NULL:187.389:366.612,131.36:0.0,0.0:0.0,3.62527e-06,1.0	0/0:32:0.999994:5,5:4-5,4-5:19,10,0,2:5,19:4,2:184.127:326.675,113.385:0.195027,0.195027:0.0,1.32039e-05,0.999987
-chr1	4509810	.	TGTGTGTGTGTG	.	.	.	END=4509821;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.00001:6,6:6-8,6-8:42,19,0,2:6,42:5,1|7,1:373.597:366.612,131.36:0.598989,0.598989:0.0,1.67446e-12,1.0	0/0:117:1.0:6,6:6-9,6-9:100,11,0,2:4,2|6,96|7,2:5,1|7,1:542.75:326.675,113.385:0.771007,0.771007:0.0,3.3599e-26,1.0
-chr1	4510185	.	TATTTATTTATT	.	.	.	END=4510196;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:221.005:366.612,131.36:0.0,0.0:0.0,6.7528e-07,1.0	0/0:36:0.999994:3,3:3-3,3-3:19,17,0,0:3,19:NULL:222.763:326.675,113.385:0.0,0.0:0.0,1.3827e-05,0.999987
-chr1	4510496	.	GAAGAAGAAGAAGAAGAA	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=4510513;RU=gaa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0382175:14,14:13-17,13-17:0,8,0,5:NULL:8,1|10,1|11,1|14,2:113.132:366.612,131.36:1.00025,1.00025:0.0,0.0,1.0	0/0:29:1.0:6,6:6-6,6-6:20,9,0,0:6,20:NULL:161.976:326.675,113.385:0.0,0.0:0.0,8.88947e-06,0.999994
-chr1	4510513	.	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	.	.	END=4510542;RU=agg;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0515067:12,12:12-15,12-15:0,6,0,7:NULL:4,2|7,2|10,1|11,1|12,1:110.798:366.612,131.36:1.40594,1.40594:0.0,0.0,1.0	0/0:30:0.99965:10,10:10-10,10-10:15,10,0,5:10,15:4,1|6,3|8,1:189.774:326.675,113.385:0.0,0.0:4e-45,0.000222649,0.999781
-chr1	4512324	.	AACAAAACAAAACAA	.	.	.	END=4512338;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998922:3,3:3-4,3-4:14,18,0,3:3,14:2,3:242.475:366.612,131.36:0.452422,0.452422:1e-45,0.000483448,0.999521	0/0:28:0.998154:3,3:3-4,3-4:12,13,0,2:3,12:2,2:178.278:326.675,113.385:0.484441,0.484441:1.24142e-39,0.00100998,0.998991
-chr1	4514924	.	TTGGTTGGTTGG	.	.	.	END=4514935;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999946:3,3:3-3,3-3:16,21,0,4:3,16:2,3|3,1:284.082:366.612,131.36:0.0,0.0:0.0,1.97494e-05,0.99998	0/0:37:1.0:3,3:3-3,3-3:27,8,0,2:3,27:2,2:196.928:326.675,113.385:0.0,0.0:0.0,2.16884e-08,1.0
-chr1	4515460	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4515507;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.684135:26,27:25-26,24-27:10,15,0,11:25,2|26,6|27,2:6,1|7,1|8,1|11,1|14,2|16,2|18,1|21,2:281.402:366.612,131.36:0.363246,0.786989:1.3169e-16,0.00404163,0.995968	0/0:33:0.584003:24,24:16-24,16-24:14,7,0,10:23,5|24,9:9,1|11,2|14,3|18,1|19,1|21,1|22,1:216.042:326.675,113.385:3.21674,3.21674:6.79599e-08,0.413248,0.586829
-chr1	4515925	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4515960;RU=gttt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:1.00001:7,7:5-7,5-7:20,18,0,8:7,20:2,1|4,1|6,6:306.672:366.612,131.36:0.339533,0.339533:1.0,2.28116e-06,0.0	0/0:62:1.0:9,9:9-9,9-9:28,19,0,15:9,28:3,2|5,1|6,2|8,10:398.289:326.675,113.385:0.0,0.0:0.0,1.04606e-08,1.0
-chr1	4517194	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	END=4517241;RU=aata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.99183:11,11:11-11,11-11:11,12,0,10:11,11:3,2|4,1|5,1|6,2|7,2|8,2:228.232:366.612,131.36:0.0,0.0:0.997852,0.00215301,3.01162e-19	0/0:29:0.947807:12,12:12-12,12-12:7,12,0,10:12,7:3,1|4,1|5,1|6,2|11,5:206.508:326.675,113.385:0.0,0.0:4.58471e-16,0.0210618,0.978979
-chr1	4517464	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4517491;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.989754:19,19:19-23,19-23:15,14,0,13:18,2|19,13:5,1|6,1|8,1|10,3|12,1|13,2|15,3|16,1:305.876:366.612,131.36:1.53858,1.53858:0.0,0.0,1.0	0/0:37:0.846884:14,14:13-15,13-15:16,7,0,13:13,2|14,12|15,2:6,1|7,1|8,3|9,3|10,3|11,1|13,1:242.078:326.675,113.385:0.495247,0.495247:3.39869e-16,0.00271662,0.997291
-chr1	4519236	.	TTTTGTTTTGTTTTG	.	.	.	END=4519250;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999986:3,3:3-3,3-3:18,23,0,0:3,18:NULL:280.201:366.612,131.36:0.0,0.0:0.0,2.30958e-05,0.999979	0/0:35:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:223.843:326.675,113.385:0.0,0.0:0.0,2.45399e-05,0.999978
-chr1	4522379	.	TTTGTTTGTTTG	.	.	.	END=4522390;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.447837:3,3:1-3,1-3:3,11,0,0:3,3:NULL:106.851:366.612,131.36:0.339533,0.339533:1.14479e-10,0.29444,0.705567	0/0:22:0.995174:3,3:3-3,3-3:11,11,0,0:3,11:NULL:142.451:326.675,113.385:0.0,0.0:1.64583e-36,0.00271403,0.997292
-chr1	4527121	.	TATATATATATATATATA	.	.	.	END=4527138;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.236118:9,9:9-9,9-9:2,0,0,0:9,2:NULL:8.24721:366.612,131.36:0.0,0.0:0.000905115,0.37211,0.627037	0/0:5:0.278082:9,9:5-9,5-9:3,1,0,0:9,3:NULL:22.0666:326.675,113.385:1.79052,1.79052:5.24669e-05,0.502426,0.497538
-chr1	4527198	.	ATATATATATATATATATAT	AT	.	.	END=4527217;RU=at;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:8:0.33062:10,10:9-11,9-11:3,3,0,0:10,3:NULL:39.0087:326.675,113.385:0.741055,0.741055:5.23093e-05,0.359284,0.640709
-chr1	4528748	.	CACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=4528795;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:55:0.99964:16,16:11-16,11-16:17,20,0,17:16,17:5,1|7,2|8,3|9,1|10,2|11,2|12,3|14,1|15,2:388.295:366.612,131.36:0.848833,0.848833:1.0,0.0,0.0	0/0:33:0.9829:24,24:24-24,24-24:10,9,0,13:24,10:5,1|7,1|8,1|9,1|16,2|18,1|19,1|21,1|23,4:237.715:326.675,113.385:0.0990099,0.0990099:5.91749e-13,0.0046174,0.995394
-chr1	4529762	.	GGGTGGGTGGGT	.	.	.	END=4529773;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.870944:3,3:3-3,3-3:6,5,0,0:3,6:NULL:67.1805:366.612,131.36:0.0,0.0:2.05362e-17,0.0642545,0.935837	0/0:20:0.865018:3,3:3-3,3-3:6,14,0,0:3,6:NULL:151.244:326.675,113.385:0.19802,0.19802:2.29599e-17,0.0763372,0.92376
-chr1	4530947	.	GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	GAGG,GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	.	.	END=4531030;RU=gagg;PERIOD=4;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	2/2:3:0.0358677:9,9:7-9,7-9:0,0,0,3:NULL:7,1|8,1|9,1:21.8276:326.675,113.385:0.540307,0.540307:1.0,0.0,0.0
-chr1	4533708	.	AAACAAACAAAC	AAAC	.	.	END=4533719;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.999983:3,3:3-3,3-3:18,8,0,0:3,18:NULL:148.323:326.675,113.385:0.0,0.0:0.0,2.30936e-05,0.999979
-chr1	4536587	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4536616;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.479008:25,25:23-29,23-29:7,5,0,14:24,2|25,5:6,2|7,3|8,2|10,1|13,1|14,1|19,2|22,1|23,1:190.956:366.612,131.36:2.46314,2.46314:0.0,0.0,1.0	0/0:45:0.99191:15,15:14-16,14-16:22,15,0,8:13,2|14,2|15,16|16,2:5,1|7,2|9,1|11,2|13,1|14,1:313.078:326.675,113.385:0.409188,0.409188:8.50151e-21,0.00223313,0.997775
-chr1	4537486	.	CCCACCCACCCA	.	.	.	END=4537497;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,12,0,0:3,30:NULL:228.608:366.612,131.36:0.0,0.0:0.0,5.14401e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:28,6,0,0:3,28:NULL:165.859:326.675,113.385:0.0,0.0:0.0,1.44741e-08,1.0
-chr1	4539497	.	AAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4539516;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.999962:5,5:4-5,4-5:18,17,0,2:5,18:2,1|3,1:242.545:366.612,131.36:0.195027,0.195027:0.0,3.80167e-05,0.999964	0/0:33:1.00001:4,4:4-4,4-4:21,8,0,4:4,21:2,1|3,3:181.496:326.675,113.385:0.0,0.0:0.0,1.42155e-06,1.0
-chr1	4540447	.	TTTATTTTATTTTAT	.	.	.	END=4540461;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.578:366.612,131.36:0.0,0.0:0.0,3.02473e-06,1.0	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:142.828:326.675,113.385:0.0,0.0:0.0,5.00032e-06,0.999995
-chr1	4542382	.	AAGAAAGAAAGA	.	.	.	END=4542393;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:142.975:366.612,131.36:0.0,0.0:0.0,1.05021e-06,1.0	0/0:16:0.995299:3,3:3-3,3-3:11,5,0,0:3,11:NULL:86.14:326.675,113.385:0.0,0.0:1.94761e-37,0.00231251,0.997693
-chr1	4543194	.	TTATTATTATTA	.	.	.	END=4543205;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999995:4,4:4-4,4-4:20,13,0,0:4,20:NULL:200.318:366.612,131.36:0.0,0.0:0.0,1.19973e-05,0.999987	0/0:24:0.999571:4,4:4-4,4-4:15,9,0,0:4,15:NULL:145.931:326.675,113.385:0.0,0.0:3.91876e-40,0.000276912,0.999727
-chr1	4544564	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4544591;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.99878:6,6:6-6,6-6:13,19,0,2:6,13:3,1|4,1:244.016:366.612,131.36:0.0,0.0:0.999628,0.000375309,2.56771e-31	0/0:24:0.994105:7,7:7-7,7-7:11,10,0,3:7,11:3,2|6,1:159.312:326.675,113.385:0.0,0.0:7.66103e-37,0.00394,0.996072
-chr1	4545765	.	ACACACACACAC	ACACACACACACACAC	.	.	END=4545776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:1.00001:8,8:8-8,8-8:20,26,0,7:8,20:5,1|6,2|7,4:381.986:366.612,131.36:0.0,0.0:0.0,7.87563e-08,1.0	0/0:54:1.0:6,6:6-6,6-6:33,18,0,3:6,33:4,1|5,2:325.214:326.675,113.385:0.0,0.0:0.0,4.0991e-10,1.0
-chr1	4547787	.	AGGAGGAGGAGG	.	.	.	END=4547798;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:28,18,0,0:4,28:NULL:285.577:366.612,131.36:0.0,0.0:0.0,7.32086e-08,1.0	0/0:37:1.0:4,4:4-4,4-4:28,9,0,0:4,28:NULL:190.861:326.675,113.385:0.0,0.0:0.0,3.96374e-08,1.0
-chr1	4556934	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT	.	.	END=4556979;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:34:0.833758:23,23:21-23,21-23:7,12,0,13:23,7:5,1|6,1|7,1|9,2|10,1|11,1|12,1|13,1|15,1|19,1|20,1|22,1:246.824:326.675,113.385:0.673849,0.673849:9.5259e-08,0.0841745,0.915921
-chr1	4566916	.	GGGTGGGTGGGT	.	.	.	END=4566927;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.567369:3,3:2-3,2-3:4,8,0,0:3,4:NULL:85.089:366.612,131.36:0.48221,0.48221:3.09765e-11,0.190045,0.810013	0/0:33:0.760216:3,3:3-3,3-3:5,28,0,0:3,5:NULL:259.804:326.675,113.385:0.0,0.0:1.50785e-13,0.153551,0.846528
-chr1	4567644	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4567655;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0338735:22,22:19-22,19-22:0,0,0,12:NULL:4,1|6,2|7,1|9,1|14,1|16,1|18,1|19,3|22,1:95.6448:366.612,131.36:1.4827,1.4827:0.0,0.000460747,0.999544	0/0:28:0.999936:6,6:6-6,6-6:17,8,0,3:6,17:4,1|5,2:171.094:326.675,113.385:0.0,0.0:1.44138e-40,3.13488e-05,0.999971
-chr1	4569841	.	TTGTTTGTTTGT	TTGTTTGTTTGTTTGT	.	.	END=4569852;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.00001:4,4:4-4,4-4:22,17,0,3:4,22:3,3:260.7:366.612,131.36:0.0,0.0:0.0,3.04953e-07,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:191.967:326.675,113.385:0.0,0.0:0.0,5.36049e-07,1.0
-chr1	4571456	.	AAACAAACAAAC	.	.	.	END=4571467;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999049:3,3:2-3,2-3:13,20,0,2:3,13:2,2:245.581:366.612,131.36:0.469019,0.469019:5.38e-43,0.000642941,0.999362	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:240.533:326.675,113.385:0.0,0.0:0.0,9.15509e-08,1.0
-chr1	4578817	.	ATTGCATTGCATTGC	.	.	.	END=4578831;RU=attgc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:22,16,0,0:3,22:NULL:233.183:366.612,131.36:0.0,0.0:0.0,1.90477e-06,1.0	0/0:36:1.0:3,3:2-3,2-3:23,10,0,2:3,23:2,2:194.365:326.675,113.385:0.323567,0.323567:0.0,5.35587e-07,1.0
-chr1	4579277	.	ACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=4579306;RU=ac;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:43:0.939866:18,19:18-19,19-19:9,17,0,17:18,4|19,5:4,1|7,1|8,2|9,3|11,1|12,1|13,3|14,3|15,1|18,1:339.652:366.612,131.36:0.442564,0.139319:0.0,0.0,1.0	0/0:42:0.980888:15,15:14-16,14-16:19,14,0,9:14,3|15,14|16,2:5,1|6,1|7,2|9,1|12,1|14,3:302.927:326.675,113.385:0.441011,0.441011:1.26407e-17,0.00565926,0.994354
-chr1	4580702	.	ATTTATTTATTT	ATTT	.	.	END=4580713;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.125985:1,1:1-2,1-2:0,24,0,0:NULL:NULL:234.882:366.612,131.36:0.499779,0.499779:0.445043,0.463997,0.0911081	0/0:37:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.636:326.675,113.385:0.139319,0.139319:0.0,1.64117e-07,1.0
-chr1	4581133	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4581176;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.297711:29,38:28-29,23-39:7,14,0,12:28,3|29,4:4,1|7,1|9,1|16,1|18,3|19,2|23,1|29,1|37,1:263.144:366.612,131.36:0.695188,6.28375:0.0,6.17484e-08,1.0	0/0:40:0.480372:22,22:21-22,21-22:8,13,0,19:21,3|22,5:5,3|7,1|8,1|9,1|11,1|12,1|13,4|15,1|16,1|18,1|20,2|21,1|22,1:307.642:326.675,113.385:0.492866,0.492866:1.39042e-12,0.48673,0.513336
-chr1	4581630	.	AATTAATTAATT	.	.	.	END=4581641;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:187.918:366.612,131.36:0.0,0.0:0.0,3.38291e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.98:326.675,113.385:0.0,0.0:0.0,6.67178e-07,1.0
-chr1	4599798	.	TTTGTTTTGTTTTGT	.	.	.	END=4599812;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:0.999999:3,3:3-3,3-3:20,35,0,0:3,20:NULL:397.608:366.612,131.36:0.0,0.0:0.0,1.02541e-05,0.999993	0/0:36:0.999927:3,3:3-3,3-3:17,19,0,0:3,17:NULL:237.147:326.675,113.385:0.0,0.0:0.0,6.69849e-05,0.999934
-chr1	4602828	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=4602885;RU=ct;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.0249419:24,28:7-29,13-29:0,14,0,8:NULL:9,1|11,2|13,2|16,1|24,1|28,1:190.043:366.612,131.36:6.72884,4.25337:0.29436,0.659006,0.0467059	0/0:22:0.585198:29,29:28-30,28-30:7,10,0,4:28,2|29,5:4,1|5,1|8,1|15,1:162.432:326.675,113.385:0.659736,0.659736:1.82059e-05,0.345316,0.654699
-chr1	4603083	.	CCTCCCCTCCCCTCC	.	.	.	END=4603097;RU=cctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.99967:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.501:366.612,131.36:0.0,0.0:0.0,0.000205378,0.999796	0/0:32:0.999994:3,3:3-3,3-3:19,13,0,0:3,19:NULL:188.353:326.675,113.385:0.0,0.0:0.0,1.20483e-05,0.999987
-chr1	4608057	.	GGGTGGGTGGGT	.	.	.	END=4608068;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.880045:3,3:3-3,3-3:6,17,0,0:3,6:NULL:173.037:366.612,131.36:0.0,0.0:1.75633e-18,0.0713738,0.92872	0/0:30:0.996315:3,3:3-3,3-3:11,19,0,0:3,11:NULL:212.434:326.675,113.385:0.0,0.0:8.84134e-33,0.00266666,0.997343
-chr1	4612833	.	TATTTATTTATT	.	.	.	END=4612844;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999731:3,3:3-3,3-3:15,19,0,0:3,15:NULL:237.486:366.612,131.36:0.0,0.0:0.0,0.000187178,0.999812	0/0:30:0.999638:3,3:3-3,3-3:14,14,0,2:3,14:2,2:198.623:326.675,113.385:0.0,0.0:0.0,0.000219158,0.999781
-chr1	4613348	.	AAATAAATAAATAAAT	.	.	.	END=4613363;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:25,18,0,3:4,25:2,1|3,2:288.879:366.612,131.36:0.0,0.0:0.0,1.33209e-07,1.0	0/0:40:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:250.85:326.675,113.385:0.0,0.0:0.0,2.46058e-06,1.0
-chr1	4618031	.	CTCTCTCTCTCT	.	.	.	END=4618042;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999981:6,6:6-6,6-6:18,18,0,2:6,18:5,2:248.094:366.612,131.36:0.139319,0.139319:7.7e-44,1.47598e-05,0.999987	0/0:46:1.0:6,6:6-6,6-6:34,9,0,3:6,34:4,1|5,2:244.385:326.675,113.385:0.0,0.0:0.0,2.11434e-10,1.0
-chr1	4618737	.	GTTTGTTTGTTTGTTT	.	.	.	END=4618752;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999742:4,4:4-4,4-4:16,11,0,2:4,16:2,1|3,1:178.008:366.612,131.36:0.0,0.0:0.0,0.000134948,0.999865	0/0:32:1.0:4,4:4-4,4-4:23,9,0,0:4,23:NULL:176.817:326.675,113.385:0.0,0.0:0.0,8.71602e-07,1.0
-chr1	4619846	.	ACCACCACCACC	.	.	.	END=4619857;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999951:4,4:4-4,4-4:17,13,0,2:4,17:3,2:207.956:366.612,131.36:0.0,0.0:0.0,2.92333e-05,0.999971	0/0:32:0.999638:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.883:326.675,113.385:0.0,0.0:0.0,0.000296661,0.999705
-chr1	4619861	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	.	END=4619904;RU=tcca;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999879:11,11:11-11,11-11:17,12,0,0:11,17:NULL:190.814:366.612,131.36:0.0,0.0:8.87201e-36,8.94935e-05,0.999911	0/0:44:0.987388:11,11:10-11,10-11:9,19,0,15:11,9:3,2|4,1|5,1|6,1|7,2|8,4|9,2|10,2:319.568:326.675,113.385:0.45695,0.45695:4.95012e-19,0.00840036,0.991621
-chr1	4620573	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4620612;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.98897:22,22:22-23,22-23:11,14,0,17:22,11:9,1|10,2|11,1|12,2|13,1|14,1|15,1|16,4|21,4:323.128:366.612,131.36:0.253975,0.253975:0.0,0.00022719,0.999774	0/0:57:0.840529:20,20:19-20,19-20:21,24,0,11:19,6|20,15:6,2|9,1|10,1|11,1|12,1|15,2|16,1|19,2:414.162:326.675,113.385:0.382696,0.382696:1.23218e-12,0.15951,0.840564
-chr1	4621359	.	TTTTTTCTTTTTTCTTTTTTC	.	.	.	END=4621379;RU=ttttttc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998551:3,3:3-3,3-3:12,16,0,2:3,12:2,2:211.688:366.612,131.36:0.0,0.0:2.06014e-39,0.000943101,0.999059	0/0:45:1.0:3,3:3-3,3-3:24,21,0,0:3,24:NULL:289.748:326.675,113.385:0.0,0.0:0.0,8.82954e-07,1.0
-chr1	4624755	.	AGGCAGAGGCAGAGGCAGAGGCAG	.	.	.	END=4624778;RU=aggcag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99884:4,4:4-4,4-4:13,12,0,2:4,13:3,2:181.288:366.612,131.36:0.0,0.0:3.828e-42,0.000638048,0.999363	0/0:54:1.0:4,4:4-4,4-4:31,18,0,5:4,31:3,5:319.943:326.675,113.385:0.0,0.0:0.0,2.05728e-09,1.0
-chr1	4625336	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4625385;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.30768:29,30:10-30,10-31:3,9,0,3:29,3:13,1|23,1|30,1:126.424:366.612,131.36:8.90044,9.91346:4.7859e-17,0.126138,0.873959	0/0:25:0.745876:25,25:24-25,24-25:6,10,0,8:25,6:11,1|15,1|16,1|17,1|20,1|23,2|24,1:182.304:326.675,113.385:0.21692,0.21692:3.33279e-08,0.0666003,0.933493
-chr1	4626527	.	TTTGTTTGTTTG	.	.	.	END=4626538;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999129:3,3:3-3,3-3:13,14,0,2:3,13:2,2:191.306:366.612,131.36:0.0,0.0:1.39e-43,0.000304124,0.999697	0/0:30:0.999991:3,3:3-3,3-3:18,10,0,2:3,18:2,2:179.203:326.675,113.385:0.0,0.0:0.0,1.23552e-05,0.999987
-chr1	4626573	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=4626592;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:21,11,0,2:4,21:3,2:196.993:366.612,131.36:0.0,0.0:0.0,1.43994e-06,1.0	0/0:26:0.999967:4,4:4-4,4-4:18,8,0,0:4,18:NULL:147.753:326.675,113.385:0.0,0.0:0.0,4.01851e-05,0.999963
-chr1	4626799	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4626850;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:43:0.702903:25,26:25-26,23-26:5,23,0,15:25,3|26,2:5,1|6,1|7,1|8,1|9,1|13,1|15,2|17,1|18,2|21,1|22,2|25,1:367.648:366.612,131.36:0.569802,0.727436:0.0451303,0.841871,0.113169	1/0:45:0.678:24,26:23-28,26-28:12,14,0,17:23,3|24,2|25,2|26,5:6,1|7,1|10,1|11,1|12,2|14,1|15,2|16,3|17,1|18,1|22,1|24,2:328.255:326.675,113.385:1.38175,0.586754:0.000234479,0.977781,0.0220282
-chr1	4629230	.	AGAGAGAGAGAGAG	.	.	.	END=4629243;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:7,7:7-7,7-7:29,34,0,4:7,29:4,1|5,1|6,2:454.035:366.612,131.36:0.0,0.0:0.0,5.7408e-09,1.0	0/0:66:1.0:7,7:7-7,7-7:40,24,0,2:7,40:4,1|5,1:392.862:326.675,113.385:0.0,0.0:0.0,9.17971e-12,1.0
-chr1	4629974	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4630023;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.870331:23,23:23-25,23-25:10,16,0,3:22,2|23,8:14,1|16,1|19,1:227.158:366.612,131.36:0.767183,0.767183:0.995297,0.00471319,2.52889e-12	2/0:43:0.776363:24,25:12-25,12-25:9,23,0,10:24,4|25,5:5,1|8,1|9,1|11,1|15,1|16,2|17,1|18,1|21,1:325.245:326.675,113.385:5.93518,6.46133:0.000205716,0.786996,0.212843
-chr1	4631170	.	AAGGACAAAGGACAAAGGACA	.	.	.	END=4631190;RU=aaggaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,14,0,2:3,20:2,2:221.92:366.612,131.36:0.0,0.0:0.0,4.45143e-06,0.999995	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.712:326.675,113.385:0.0,0.0:0.0,5.48697e-06,0.999995
-chr1	4637541	.	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	.	.	END=4637620;RU=aagag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:57:0.997026:15,16:15-16,15-16:5,29,0,23:15,2|16,3:2,1|3,3|4,1|5,2|6,2|7,3|8,3|9,1|13,1|14,3|15,3:458.031:366.612,131.36:0.298675,0.21692:5.33947e-07,0.997066,0.00294373	1/1:37:0.666402:15,15:7-15,7-15:4,13,0,19:15,4:4,4|6,3|7,2|8,2|10,1|12,3|13,2|14,2:271.649:326.675,113.385:3.85559,3.85559:0.86852,0.131573,2.53072e-08
-chr1	4637824	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4637855;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.995618:20,20:20-20,20-20:13,8,0,11:20,13:5,1|6,2|7,1|8,1|10,1|14,2|16,1|18,1|19,1:218.423:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:33:0.641168:16,16:15-17,15-17:13,13,0,6:15,4|16,9:6,1|9,1|10,2|15,2:236.615:326.675,113.385:0.609213,0.609213:1.13819e-09,0.357257,0.64279
-chr1	4639717	.	ATTTATTTATTTATTT	.	.	.	END=4639732;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:29,12,0,6:4,29:3,6:267.88:366.612,131.36:0.0,0.0:0.0,5.25643e-09,1.0	0/0:34:1.0:4,4:4-4,4-4:25,7,0,2:4,25:3,2:184.06:326.675,113.385:0.0,0.0:0.0,1.53537e-07,1.0
-chr1	4642589	.	CTTTCTTTCTTT	.	.	.	END=4642600;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:24,17,0,2:3,24:2,2:268.451:366.612,131.36:0.0,0.0:0.0,1.27997e-07,1.0	0/0:43:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:275.826:326.675,113.385:0.0,0.0:0.0,8.98022e-07,1.0
-chr1	4643335	.	AAGGAAGGAAGG	.	.	.	END=4643346;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,8,0,4:3,30:2,4:221.947:366.612,131.36:0.0,0.0:0.0,1.92521e-09,1.0	0/0:49:1.0:3,3:3-3,3-3:29,17,0,3:3,29:2,3:290.615:326.675,113.385:0.0,0.0:0.0,9.02746e-09,1.0
-chr1	4648909	.	TTGTTTTGTTTTGTT	.	.	.	END=4648923;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.459673:3,3:1-3,1-3:3,19,0,0:3,3:NULL:180.672:366.612,131.36:0.508722,0.508722:2.71995e-10,0.425296,0.574792	0/0:23:0.912248:3,3:3-3,3-3:7,16,0,0:3,7:NULL:178.273:326.675,113.385:0.0,0.0:9.71457e-23,0.070973,0.929121
-chr1	4653049	.	TTTCTTTCTTTC	.	.	.	END=4653060;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:166.14:366.612,131.36:0.0,0.0:0.0,1.51626e-06,1.0	0/0:21:0.999371:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.355:326.675,113.385:0.0,0.0:0.0,0.000334464,0.999667
-chr1	4653751	.	AAAACAAAAACAAAAACA	.	.	.	END=4653768;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999993:3,3:1-3,1-3:21,21,0,0:3,21:NULL:274.047:366.612,131.36:0.863148,0.863148:0.0,1.14986e-05,0.999988	0/0:36:0.999992:3,3:3-3,3-3:18,16,0,2:3,18:2,2:230.727:326.675,113.385:0.0,0.0:0.0,1.67796e-05,0.999986
-chr1	4654599	.	GTTGGTTGGTTG	GTTGGTTGGTTGGTTG	.	.	END=4654610;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999927:4,4:3-4,3-4:17,16,0,0:4,17:NULL:216.93:366.612,131.36:0.270063,0.270063:0.0,3.87117e-05,0.999963	0/0:25:0.999943:3,3:3-3,3-3:17,8,0,0:3,17:NULL:139.825:326.675,113.385:0.0,0.0:0.0,3.49385e-05,0.999964
-chr1	4655498	.	TGTGTGTGTGTG	TGTGTGTGTG	.	.	END=4655509;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999717:5,5:4-5,4-5:16,25,0,0:5,16:NULL:286.158:366.612,131.36:0.334882,0.334882:0.999949,5.08902e-05,1.01e-43	0/0:35:0.999992:6,6:6-6,6-6:19,16,0,0:6,19:NULL:220.995:326.675,113.385:0.0,0.0:2.6249e-41,1.50959e-05,0.999986
-chr1	4661585	.	ACAACAACAACA	.	.	.	END=4661596;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:219.982:366.612,131.36:0.0,0.0:0.0,3.05948e-06,1.0	0/0:28:0.999994:4,4:4-4,4-4:19,9,0,0:4,19:NULL:163.593:326.675,113.385:0.0,0.0:0.0,1.5113e-05,0.999986
-chr1	4661836	.	GTGGGTGGGTGG	.	.	.	END=4661847;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999839:3,3:3-3,3-3:16,13,0,0:3,16:NULL:182.229:366.612,131.36:0.0,0.0:0.0,9.61132e-05,0.999904	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:189.198:326.675,113.385:0.0,0.0:0.0,3.92993e-07,1.0
-chr1	4663912	.	AATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATA	.	.	END=4663943;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.997908:6,6:6-6,6-6:13,13,0,0:6,13:NULL:175.356:366.612,131.36:0.0,0.0:0.999734,0.000269517,6.86485e-36	0/0:21:0.992977:8,8:8-8,8-8:10,6,0,5:8,10:3,1|4,1|5,1|6,1|7,1:132.276:326.675,113.385:0.0,0.0:1.45405e-32,0.0035816,0.996428
-chr1	4664837	.	GTTTGTTTGTTTGTTT	.	.	.	END=4664852;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:21,15,0,2:4,21:2,1|3,1:230.746:366.612,131.36:0.0,0.0:0.0,1.93539e-06,1.0	0/0:30:0.999068:4,4:2-4,2-4:14,15,0,0:4,14:NULL:192.754:326.675,113.385:0.997595,0.997595:4.60983e-38,0.000776317,0.999226
-chr1	4666307	.	AAACAAACAAACAAACAAAC	.	.	.	END=4666326;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999992:5,5:5-5,5-5:18,21,0,5:5,18:3,1|4,4:300.251:366.612,131.36:0.0,0.0:0.0,1.29769e-05,0.999987	0/0:39:1.00001:5,5:5-5,5-5:22,12,0,5:5,22:2,2|3,1|4,2:233.656:326.675,113.385:0.0,0.0:0.0,8.89071e-07,1.0
-chr1	4666832	.	TAAATAAATAAA	.	.	.	END=4666843;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:20,16,0,3:3,20:2,3:241.532:366.612,131.36:0.0,0.0:0.0,2.62971e-06,1.0	0/0:25:0.998541:3,3:3-3,3-3:12,10,0,3:3,12:2,3:161.795:326.675,113.385:0.0,0.0:5.2568e-41,0.00054033,0.999462
-chr1	4675038	.	AAAACAAAACAAAAC	.	.	.	END=4675052;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:3,3:3-3,3-3:38,26,0,0:3,38:NULL:382.892:366.612,131.36:0.0,0.0:0.0,3.33165e-11,1.0	0/0:50:1.0:3,3:3-3,3-3:34,14,0,2:3,34:2,2:279.961:326.675,113.385:0.0,0.0:0.0,2.22486e-10,1.0
-chr1	4675154	.	ATAAATAAATAA	.	.	.	END=4675165;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:19,26,0,2:3,19:2,2:322.023:366.612,131.36:0.0,0.0:0.0,8.43525e-06,0.999994	0/0:48:1.0:3,3:3-3,3-3:31,17,0,0:3,31:NULL:279.737:326.675,113.385:0.0,0.0:0.0,2.42215e-09,1.0
-chr1	4678790	.	AGTGAGTGAGTG	.	.	.	END=4678801;RU=agtg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.99837:3,3:3-3,3-3:13,8,0,0:3,13:NULL:127.939:366.612,131.36:0.0,0.0:8.83e-43,0.000853769,0.99915	0/0:30:0.999849:3,3:3-3,3-3:16,14,0,0:3,16:NULL:198.303:326.675,113.385:0.0,0.0:0.0,0.00010299,0.999896
-chr1	4678965	.	ACAGACAGACAG	.	.	.	END=4678976;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.558221:3,3:2-3,2-3:4,11,0,0:3,4:NULL:114.069:366.612,131.36:0.169767,0.169767:6.68288e-13,0.253675,0.746332	0/0:22:0.998838:3,3:3-3,3-3:13,9,0,0:3,13:NULL:138.47:326.675,113.385:0.0,0.0:1.0019e-41,0.000656811,0.999347
-chr1	4682367	.	TGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGT	.	.	END=4682390;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:1.0:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.642:366.612,131.36:0.0,0.0:1.0,1.95473e-06,0.0	0/0:25:0.999871:8,8:8-8,8-8:16,4,0,5:8,16:3,1|6,2|7,2:137.885:326.675,113.385:0.0,0.0:4.181e-42,4.04716e-05,0.999963
-chr1	4686168	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4686209;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.187797:22,22:22-24,22-24:2,10,0,11:22,2:5,1|6,1|8,1|10,1|11,1|12,2|14,1|15,2|17,1:189.185:366.612,131.36:0.74264,0.74264:0.00012952,0.20116,0.798757	0/0:32:0.914242:21,21:20-22,20-22:8,7,0,15:21,8:5,2|6,1|7,1|9,3|10,2|13,1|14,1|15,1|16,1|17,2:218.165:326.675,113.385:0.43744,0.43744:1.32364e-09,0.0367255,0.963338
-chr1	4686524	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=4686563;RU=attt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.151438:7,7:7-10,7-10:0,28,0,0:NULL:NULL:276.397:366.612,131.36:1.35046,1.35046:0.470992,0.446304,0.0828489	0/0:29:0.947364:10,10:10-10,10-10:7,12,0,10:10,7:4,1|5,5|7,1|8,1|9,2:216.363:326.675,113.385:0.0,0.0:6.04772e-18,0.0269432,0.973108
-chr1	4686877	.	CTCTTGCCTCTTGCCTCTTGC	CTCTTGCCTCTTGC	.	.	END=4686897;RU=ctcttgc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:1.00001:2,2:2-2,2-2:20,2,0,0:2,20:NULL:101.017:366.612,131.36:0.0,0.0:0.999994,6.05004e-06,0.0	0/0:29:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:171.243:326.675,113.385:0.0,0.0:0.0,1.90551e-05,0.999985
-chr1	4686995	.	CAACCAACCAAC	.	.	.	END=4687006;RU=caac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999964:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.776:366.612,131.36:0.0,0.0:0.0,2.7351e-05,0.999972	0/0:31:1.00001:3,3:3-3,3-3:22,7,0,2:3,22:2,2:165.401:326.675,113.385:0.0,0.0:0.0,6.19326e-07,1.0
-chr1	4687079	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=4687118;RU=tttg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.97354:9,9:9-9,9-9:9,9,0,2:9,9:4,1|6,1:135.748:366.612,131.36:0.0,0.0:0.992191,0.00782769,1.51507e-15	0/0:31:0.999473:10,10:10-10,10-10:14,9,0,8:10,14:3,2|4,1|5,2|6,1|8,1|9,1:196.508:326.675,113.385:0.0,0.0:4.71767e-36,0.000248488,0.999751
-chr1	4689281	.	CCGCCGCCGCCG	.	.	.	END=4689292;RU=ccg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:244.472:366.612,131.36:0.0,0.0:0.0,7.97427e-09,1.0	0/0:55:1.0:4,4:4-4,4-4:36,19,0,0:4,36:NULL:318.93:326.675,113.385:0.0,0.0:0.0,2.99631e-10,1.0
-chr1	4689823	.	AAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=4689834;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.570554:4,4:1-4,1-4:4,18,0,0:4,4:NULL:181.263:366.612,131.36:0.896026,0.896026:5.26906e-18,0.295691,0.704315	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:157.83:326.675,113.385:0.0,0.0:0.0,3.10126e-06,1.0
-chr1	4697276	.	CACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=4697299;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.99099:16,16:13-16,13-16:12,15,0,0:16,12:NULL:194.439:366.612,131.36:1.26733,1.26733:0.0,0.00227994,0.997724	0/0:29:0.982059:12,12:11-13,11-13:14,6,0,8:11,2|12,12:4,1|6,1|8,2|9,1|10,2|11,1:184.4:326.675,113.385:0.280742,0.280742:1.87038e-14,0.0171058,0.98293
-chr1	4697462	.	ATTATTATTATT	.	.	.	END=4697473;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:22,30,0,3:4,22:3,3:390.194:366.612,131.36:0.0,0.0:0.0,1.00364e-06,1.0	0/0:53:1.0:4,4:4-4,4-4:31,20,0,2:4,31:3,2:325.467:326.675,113.385:0.0,0.0:0.0,2.24018e-09,1.0
-chr1	4698068	.	GGAGGAGGAGGA	GGAGGAGGAGGAGGAGGA	.	.	END=4698079;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.00001:6,6:6-6,6-6:23,16,0,4:6,23:4,3|5,1:261.501:366.612,131.36:0.0990099,0.0990099:0.0,5.27864e-08,1.0	0/0:26:0.999945:4,4:4-4,4-4:17,6,0,3:4,17:3,3:141.186:326.675,113.385:0.0,0.0:0.0,2.1746e-05,0.999979
-chr1	4699171	.	TTTTGTTTTGTTTTG	.	.	.	END=4699185;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:40,16,0,0:3,40:NULL:305.478:366.612,131.36:0.0,0.0:0.0,5.41064e-12,1.0	0/0:37:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:196.267:326.675,113.385:0.0,0.0:0.0,4.22444e-08,1.0
-chr1	4700769	.	CCTCCTCCTCCT	.	.	.	END=4700780;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,14,0,2:4,21:3,2:226.516:366.612,131.36:0.0,0.0:0.0,2.88555e-06,1.0	0/0:22:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:101.437:326.675,113.385:0.0,0.0:0.0,1.29604e-05,0.999987
-chr1	4700784	.	CCACCACCACCA	.	.	.	END=4700795;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999947:4,4:4-4,4-4:17,13,0,3:4,17:3,3:209.523:366.612,131.36:0.0,0.0:0.0,2.62881e-05,0.999978	0/0:22:0.999771:4,4:4-4,4-4:15,4,0,3:4,15:3,3:116.705:326.675,113.385:0.0,0.0:7e-45,8.66633e-05,0.999917
-chr1	4702033	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4702088;RU=ac;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.949836:18,18:18-27,18-27:10,7,0,0:18,10:NULL:111.362:366.612,131.36:4.28531,4.28531:0.996482,0.00352666,0.0	2/0:38:0.603072:27,28:26-28,26-28:4,17,0,16:27,2|28,2:6,2|10,1|12,1|13,1|14,1|18,1|20,2|21,4|26,2|27,1:299.119:326.675,113.385:0.60323,0.547158:0.0242104,0.693448,0.282391
-chr1	4704115	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4704162;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	2/0:32:0.730822:23,24:23-24,24-24:8,14,0,10:23,3|24,5:5,2|11,2|15,3|17,1|18,1|23,1:250.512:326.675,113.385:0.498011,0.0990099:0.00034609,0.740631,0.259029
-chr1	4704841	.	TCTTTCTTTCTT	.	.	.	END=4704852;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:239.977:366.612,131.36:0.0,0.0:0.0,1.205e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:259.944:326.675,113.385:0.0,0.0:0.0,1.46928e-07,1.0
-chr1	4706710	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=4706733;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999301:6,6:6-6,6-6:14,12,0,9:6,14:3,4|4,4|5,1:233.335:366.612,131.36:0.0,0.0:1.17776e-34,0.000402795,0.999599	0/0:17:0.981548:6,6:6-6,6-6:9,4,0,4:6,9:3,2|4,1|5,1:103.685:326.675,113.385:0.0,0.0:8.31345e-23,0.00768594,0.992333
-chr1	4713034	.	ATATATATATAT	.	.	.	END=4713045;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.998997:6,6:6-7,6-7:14,12,0,0:6,14:NULL:161.232:366.612,131.36:0.345543,0.345543:1.41345e-23,0.000456233,0.999545	0/0:22:0.999591:6,6:6-6,6-6:15,7,0,0:6,15:NULL:125.478:326.675,113.385:0.0,0.0:4.14375e-25,0.000265164,0.999736
-chr1	4715718	.	TTGTTGTTGTTG	.	.	.	END=4715729;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999965:4,4:4-4,4-4:19,16,0,0:4,19:NULL:221.081:366.612,131.36:0.0,0.0:0.0,3.13059e-05,0.999971	0/0:30:1.0:4,4:4-4,4-4:19,9,0,2:4,19:3,2:175.124:326.675,113.385:0.0,0.0:0.0,8.15183e-06,0.999994
-chr1	4717842	.	TCTTTCTTTCTTTCTT	.	.	.	END=4717857;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:25,24,0,2:4,25:3,2:339.318:366.612,131.36:0.0,0.0:0.0,3.68868e-07,1.0	0/0:41:0.999986:4,4:4-4,4-4:20,21,0,0:4,20:NULL:270.973:326.675,113.385:0.0,0.0:0.0,2.59705e-05,0.999978
-chr1	4718882	.	AACTAACTAACT	.	.	.	END=4718893;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,20,0,2:3,24:2,2:285.668:366.612,131.36:0.0,0.0:0.0,4.09028e-07,1.0	0/0:26:0.999882:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.664:326.675,113.385:0.0,0.0:0.0,6.8464e-05,0.999933
-chr1	4719899	.	CACACACACACACACACA	CACACACACACACACACACA	.	.	END=4719916;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:0.997642:10,10:10-15,10-15:34,18,0,3:10,34:9,2|15,1:344.303:366.612,131.36:2.24763,2.24763:0.0,1.18615e-10,1.0	0/0:31:1.0:9,9:9-9,9-9:24,6,0,0:9,24:NULL:154.629:326.675,113.385:0.0990099,0.0990099:9.45833e-37,6.36154e-07,1.0
-chr1	4722124	.	AAACAAACAAACAAAC	AAACAAAC,AAACAAACAAAC	.	.	END=4722139;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.184894:2,3:1-4,2-4:0,27,0,2:NULL:3,2:288.601:366.612,131.36:0.914864,0.61098:0.38494,0.537507,0.0776752	0/0:30:0.999591:4,4:4-4,4-4:14,10,0,6:4,14:2,3|3,3:188.17:326.675,113.385:0.0,0.0:4.64806e-36,0.000157759,0.999843
-chr1	4725802	.	ACATACATACAT	.	.	.	END=4725813;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-9,3-9:32,16,0,0:3,32:NULL:276.69:366.612,131.36:2.76732,2.76732:0.0,2.35909e-09,1.0	0/0:35:1.0:3,3:3-3,3-3:27,8,0,0:3,27:NULL:182.575:326.675,113.385:0.0,0.0:0.0,4.38532e-08,1.0
-chr1	4726010	.	TTGCTTTGCTTTGCTTTGCTTTGCT	TTGCT	.	.	END=4726034;RU=ttgct;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0189889:1,1:1-5,1-5:0,9,0,0:NULL:NULL:79.2751:366.612,131.36:1.56624,1.56624:0.226535,0.525124,0.248383	0/0:34:1.00001:5,5:4-5,4-5:22,9,0,2:5,22:2,1|3,1:187.145:326.675,113.385:0.236383,0.236383:0.0,2.3239e-06,1.0
-chr1	4727699	.	ATAAATAAATAA	.	.	.	END=4727710;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:3:0.444226:3,3:3-3,3-3:3,0,0,0:3,3:NULL:11.7222:366.612,131.36:0.0,0.0:2.47845e-10,0.222364,0.777675	0/0:27:0.998966:3,3:3-3,3-3:13,14,0,0:3,13:NULL:177.13:326.675,113.385:0.0,0.0:4.2333e-41,0.000612016,0.999392
-chr1	4730651	.	CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	CTC	.	.	END=4730686;RU=ctc;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0285318:1,1:1-3,1-3:0,12,0,0:NULL:NULL:107.704:366.612,131.36:0.629628,0.629628:0.688685,0.293806,0.0175481	0/0:21:0.9577:12,12:11-12,11-12:8,9,0,3:12,8:8,2|11,1:137.236:326.675,113.385:0.382696,0.382696:2.19064e-17,0.0232822,0.976764
-chr1	4732027	.	CTCTCTCTCTCTCT	CTCTCTCTCTCT	.	.	END=4732040;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.0:6,6:6-6,6-6:40,9,0,0:6,40:NULL:244.43:366.612,131.36:0.0,0.0:1.0,6.78159e-12,0.0	0/0:39:0.999355:7,7:7-8,7-8:23,12,0,4:7,21|8,2:4,1|5,1|6,2:242.981:326.675,113.385:0.169767,0.169767:1.39357e-38,6.40975e-07,1.0
-chr1	4736939	.	AAATAAATAAATAAAT	.	.	.	END=4736954;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999453:4,4:4-4,4-4:15,16,0,0:4,15:NULL:209.92:366.612,131.36:0.0,0.0:4.8e-44,0.000465687,0.999537	0/0:14:0.826804:4,4:4-4,4-4:6,8,0,0:4,6:NULL:94.3292:326.675,113.385:0.0,0.0:3.84179e-18,0.110392,0.889705
-chr1	4744698	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTT	.	.	END=4744727;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999849:3,3:3-3,3-3:16,15,0,3:3,16:2,3:226.572:366.612,131.36:0.0,0.0:0.99998,1.92607e-05,0.0	0/0:29:0.999864:6,6:6-6,6-6:16,9,0,4:6,16:2,1|3,2|5,1:173.344:326.675,113.385:0.0,0.0:0.0,8.61569e-05,0.999917
-chr1	4746881	.	TAGATAGATAGA	.	.	.	END=4746892;RU=taga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,1|3,1:188.564:366.612,131.36:0.0,0.0:0.0,2.9315e-06,1.0	0/0:20:0.99898:3,3:3-3,3-3:13,7,0,0:3,13:NULL:113.283:326.675,113.385:0.0,0.0:1.927e-42,0.000512317,0.999491
-chr1	4749824	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=4749859;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.491197:12,14:12-19,12-19:6,15,0,0:12,2|13,2|14,2:NULL:170.202:366.612,131.36:2.80724,2.22986:0.998504,0.00150085,2.85157e-16	0/0:7:0.355433:18,18:17-18,17-18:3,3,0,0:18,3:NULL:40.6567:326.675,113.385:0.607117,0.607117:0.00025367,0.373956,0.625845
-chr1	4755604	.	GGAGGGAGGGAGGGAG	.	.	.	END=4755619;RU=ggag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.303264:4,4:4-4,4-4:2,5,0,0:4,2:NULL:51.7998:366.612,131.36:0.0,0.0:1.04381e-05,0.377089,0.622955	0/0:15:0.994918:4,4:4-4,4-4:11,2,0,2:4,11:2,2:74.6159:326.675,113.385:0.0,0.0:3.27251e-26,0.00232733,0.997678
-chr1	4755631	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	.	END=4755720;RU=gagag;PERIOD=5;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.0345281:18,18:1-18,1-18:0,4,0,4:NULL:7,1|13,1|15,2:63.3554:366.612,131.36:4.54331,4.54331:0.631007,0.33457,0.0345084	0/0:21:0.204562:18,18:6-18,6-18:2,6,0,12:18,2:3,1|4,3|5,1|6,1|8,2|12,2|13,1|16,1:149.302:326.675,113.385:5.75506,5.75506:0.000265565,0.60808,0.39172
-chr1	4757329	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=4757372;RU=ct;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.0928393:18,18:18-21,18-21:0,24,0,0:NULL:NULL:219.478:366.612,131.36:1.4276,1.4276:0.50981,0.412801,0.0774748	0/0:17:0.290199:22,22:18-22,18-22:6,7,0,3:21,2|22,4:5,1|6,1|12,1:120.818:326.675,113.385:1.77374,1.77374:0.00012047,0.657285,0.34262
-chr1	4758257	.	AATAAATAAATA	AATA	.	.	END=4758268;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.247138:1,1:1-3,1-3:0,22,0,0:NULL:NULL:224.468:366.612,131.36:0.911644,0.911644:0.474337,0.438266,0.0875358	0/0:19:0.992514:3,3:3-3,3-3:10,7,0,2:3,10:2,2:120.596:326.675,113.385:0.0,0.0:2.10875e-29,0.00267692,0.99733
-chr1	4761246	.	TTTGTTTGTTTG	TTTGTTTG	.	.	END=4761257;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.999753:2,2:2-2,2-2:15,9,0,0:2,15:NULL:139.97:366.612,131.36:0.0,0.0:0.999841,0.000161256,4.8e-44	0/0:26:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:129.24:326.675,113.385:0.0,0.0:0.0,2.46117e-06,1.0
-chr1	4765570	.	AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA	AAAGA,AAAGAAAAGAAAAGAAAAGAAAAGA	.	.	END=4765609;RU=aaaga;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0327166:1,1:1-5,1-5:0,9,0,0:NULL:NULL:86.9262:366.612,131.36:1.26307,1.26307:0.53443,0.419224,0.0465006	2/2:1:0.020438:5,5:8-8,8-8:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
-chr1	4767274	.	TTTTGTTTTGTTTTG	TTTTGTTTTG	.	.	END=4767288;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.00001:2,2:2-2,2-2:22,11,0,0:2,22:NULL:183.799:366.612,131.36:0.0,0.0:1.0,1.05278e-06,0.0	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.989:326.675,113.385:0.0,0.0:0.0,1.98159e-06,1.0
-chr1	4769727	.	TTTTTTTGTTTTTTTGTTTTTTTG	TTTTTTTG	.	.	END=4769750;RU=tttttttg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.164897:1,1:1-2,1-2:0,27,0,0:NULL:NULL:231.409:366.612,131.36:0.412766,0.412766:0.544221,0.398179,0.057756	0/0:8:0.653109:3,3:1-3,1-3:4,3,0,0:3,4:NULL:42.5872:326.675,113.385:0.968882,0.968882:1.43076e-12,0.160707,0.839368
-chr1	4772542	.	AATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4772569;RU=aata;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.275424:7,7:7-8,7-8:2,2,0,2:7,2:3,1|5,1:43.124:366.612,131.36:0.371782,0.371782:6.84117e-06,0.345865,0.654163	0/0:23:0.955763:7,7:7-7,7-7:7,9,0,7:7,7:3,1|5,2|6,4:162.133:326.675,113.385:0.0,0.0:5.84855e-18,0.0186585,0.981379
-chr1	4777183	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=4777216;RU=tc;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.998464:8,8:8-8,8-8:13,12,0,3:8,13:7,3:186.353:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:31:0.754583:17,17:16-17,16-17:5,14,0,11:17,5:4,1|5,2|6,1|9,1|10,1|11,1|12,1|14,1|16,2:236.182:326.675,113.385:0.442564,0.442564:3.68037e-08,0.107497,0.892602
-chr1	4778087	.	TGTGTGTGTGTG	TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG	.	.	END=4778098;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.982749:7,9:7-9,7-9:4,23,0,2:7,2|9,2:6,2:239.527:366.612,131.36:0.5634,0.665211:4.26849e-27,6.03865e-05,0.999941	0/0:31:0.996471:6,6:6-7,6-7:12,18,0,0:6,12:NULL:212.097:326.675,113.385:0.169767,0.169767:7.9323e-14,0.00208419,0.997921
-chr1	4779799	.	TGTGTGTGTGTGTG	.	.	.	END=4779812;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999841:7,7:7-7,7-7:16,14,0,0:7,16:NULL:192.429:366.612,131.36:0.0,0.0:2.56299e-31,8.08966e-05,0.999919	0/0:18:0.999693:7,7:7-7,7-7:15,1,0,2:7,15:5,1|6,1:84.5827:326.675,113.385:0.0,0.0:1.64184e-29,0.0001191,0.999881
-chr1	4780052	.	GTTTGTTTGTTT	.	.	.	END=4780063;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999904:3,3:3-3,3-3:17,19,0,0:3,17:NULL:238.62:366.612,131.36:0.0,0.0:0.0,7.31266e-05,0.999926	0/0:29:1.00001:3,3:3-3,3-3:20,7,0,2:3,20:2,2:156.501:326.675,113.385:0.0,0.0:0.0,2.69589e-06,1.0
-chr1	4781290	.	AAAACAAAACAAAACAAAAC	AAAAC	.	.	END=4781309;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.077236:1,1:1-3,1-3:0,9,0,0:NULL:NULL:83.6948:366.612,131.36:0.885129,0.885129:0.393228,0.473883,0.132974	0/0:22:0.998513:4,4:4-4,4-4:13,6,0,3:4,13:3,3:130.081:326.675,113.385:0.0,0.0:3.564e-42,0.000659424,0.999346
-chr1	4783247	.	ATATATATATATAT	ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATAT	.	.	END=4783260;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:15:0.914663:15,16:15-16,15-16:5,10,0,0:15,3|16,2:NULL:117.259:366.612,131.36:0.38423,0.661813:0.0,0.0,1.0	0/0:16:0.97951:7,7:6-7,6-7:10,5,0,0:7,10:NULL:92.6401:326.675,113.385:0.253975,0.253975:2.75527e-13,0.0112003,0.988822
-chr1	4783908	.	AAAAAACAAAAAACAAAAAAC	AAAAAAC	.	.	END=4783928;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.121674:1,1:1-2,1-2:0,13,0,0:NULL:NULL:122.189:366.612,131.36:0.38244,0.38244:0.327036,0.514355,0.158633	0/0:20:0.999388:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.87:326.675,113.385:0.0,0.0:0.0,0.00041394,0.99959
-chr1	4789575	.	TGAATGAATGAA	.	.	.	END=4789586;RU=tgaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.544:366.612,131.36:0.0,0.0:0.0,7.52438e-07,1.0	0/0:22:0.999979:3,3:3-3,3-3:18,4,0,0:3,18:NULL:103.76:326.675,113.385:0.0,0.0:0.0,1.71272e-05,0.999986
-chr1	4790408	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG,AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=4790503;RU=aag;PERIOD=3;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0413989:14,14:14-16,14-16:0,14,0,3:NULL:5,1|12,1|14,1:150.9:366.612,131.36:0.752866,0.752866:1.0,0.0,0.0	2/2:28:0.0217444:31,31:6-32,6-32:0,12,0,13:NULL:6,1|7,2|9,1|12,1|15,1|22,1|28,4|29,1|31,1:211.088:326.675,113.385:11.7012,11.7012:0.153782,0.603073,0.243224
-chr1	4790591	.	AATAATAATAATAATAAT	AATAATAATAATAAT	.	.	END=4790608;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:1.00001:5,5:5-5,5-5:22,10,0,0:5,22:NULL:183.042:366.612,131.36:0.0,0.0:1.0,1.20863e-06,1e-44	0/0:19:0.999865:6,6:6-6,6-6:16,1,0,2:6,16:4,1|5,1:86.8798:326.675,113.385:0.0,0.0:9.7689e-37,5.64849e-05,0.999947
-chr1	4794293	.	AGACAGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGAC	.	.	END=4794312;RU=agac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:7,7:7-7,7-7:20,16,0,5:7,20:2,1|3,2|6,2:262.128:366.612,131.36:0.0,0.0:0.0,8.52709e-07,1.0	0/0:46:0.999962:5,5:4-5,4-5:17,18,0,10:5,17:2,2|3,2|4,6:306.135:326.675,113.385:0.236383,0.236383:0.0,1.79042e-05,0.999986
-chr1	4795085	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	END=4795132;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.983372:11,11:10-11,10-11:10,7,0,5:11,10:2,1|4,1|6,2|8,1:148.19:366.612,131.36:0.374147,0.374147:0.993804,0.00621315,1.9132e-19	0/0:18:0.808038:12,12:11-12,11-12:6,5,0,6:12,6:4,2|6,1|7,2|9,1:115.137:326.675,113.385:0.486863,0.486863:1.85358e-15,0.117728,0.882373
-chr1	4795238	.	GTTTTGTTTTGTTTTGTTTT	GTTTTGTTTT	.	.	END=4795257;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0361998:2,2:1-2,1-2:0,10,0,0:NULL:NULL:91.2136:366.612,131.36:0.497026,0.497026:0.251267,0.543828,0.204912	0/0:17:0.999259:4,4:4-4,4-4:14,3,0,0:4,14:NULL:82.904:326.675,113.385:0.0,0.0:0.0,0.000434742,0.999568
-chr1	4796020	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=4796043;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:2,2:223.615:366.612,131.36:0.0,0.0:1.0,1.53343e-06,0.0	0/0:47:0.999782:6,6:5-6,5-6:15,24,0,7:6,15:2,1|3,1|4,2|5,3:330.305:326.675,113.385:0.21692,0.21692:3.8787e-40,0.000165203,0.999835
-chr1	4802916	.	TCTCTCTCTCTCTC	TCTCTCTCTC,TCTCTCTCTCTCTCTC	.	.	END=4802929;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.942033:5,8:5-8,7-8:8,14,0,0:5,2|7,2|8,4:NULL:166.965:366.612,131.36:0.907009,0.442564:2.56506e-07,0.96656,0.0335034	0/0:32:0.999643:7,7:6-7,6-7:16,14,0,0:7,16:NULL:187.072:326.675,113.385:0.258566,0.258566:1.91725e-19,0.000245916,0.999757
-chr1	4804071	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=4804095;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.0894039:5,5:2-5,2-5:0,11,0,4:NULL:4,4:127.203:366.612,131.36:0.778346,0.778346:0.129595,0.474151,0.396449	0/0:28:0.999989:5,5:5-5,5-5:18,8,0,2:5,18:3,1|4,1:156.963:326.675,113.385:0.0,0.0:0.0,1.81889e-05,0.999985
-chr1	4804879	.	AAAAACAAAAACAAAAAC	.	.	.	END=4804896;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999446:3,3:3-3,3-3:14,20,0,0:3,14:NULL:236.542:366.612,131.36:0.0,0.0:0.0,0.000471379,0.99953	0/0:28:0.999832:3,3:3-3,3-3:16,12,0,0:3,16:NULL:173.907:326.675,113.385:0.0,0.0:0.0,0.00012135,0.99988
-chr1	4805189	.	ATTTATTTATTT	ATTTATTTATTTATTT	.	.	END=4805200;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.999411:3,4:3-4,4-4:18,5,0,2:3,6|4,12:2,2:141.207:366.612,131.36:0.323567,0.0:0.0,7.80262e-09,1.0	0/0:24:0.999635:3,3:3-3,3-3:15,9,0,0:3,15:NULL:140.572:326.675,113.385:0.0,0.0:0.0,0.000191892,0.999811
-chr1	4806133	.	TGTGTGTGTGTGTG	.	.	.	END=4806146;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995514:7,7:7-7,7-7:11,16,0,3:7,11:5,2|6,1:212.496:366.612,131.36:0.0,0.0:9.26685e-23,0.00238463,0.997624	0/0:34:0.999992:7,7:7-7,7-7:19,15,0,0:7,19:NULL:214.097:326.675,113.385:0.0,0.0:6.24431e-39,1.63575e-05,0.999986
-chr1	4806257	.	CTGACTGACTGA	.	.	.	END=4806268;RU=ctga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:159.946:366.612,131.36:0.0,0.0:0.0,2.69918e-07,1.0	0/0:25:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.994:326.675,113.385:0.0,0.0:0.0,2.00295e-05,0.99998
-chr1	4806381	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCT	.	.	END=4806412;RU=ttct;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0223139:1,1:1-2,1-2:0,9,0,0:NULL:NULL:81.0159:366.612,131.36:0.486863,0.486863:0.428852,0.485257,0.0860298	0/0:26:0.445733:8,8:6-8,6-8:3,10,0,13:8,3:2,1|3,1|4,1|5,3|6,7:196.493:326.675,113.385:0.390054,0.390054:0.000803766,0.336268,0.662947
-chr1	4808103	.	GCCTGCCTGCCT	.	.	.	END=4808114;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:189.832:366.612,131.36:0.0,0.0:0.0,6.95971e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:195.369:326.675,113.385:0.0,0.0:0.0,2.4422e-07,1.0
-chr1	4809703	.	ATGAATGAATGAATGA	.	.	.	END=4809718;RU=atga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999994:4,4:4-4,4-4:19,5,0,0:4,19:NULL:118.253:366.612,131.36:0.0,0.0:0.0,1.32162e-05,0.999987	0/0:25:0.99999:4,4:4-4,4-4:18,5,0,2:4,18:2,1|3,1:134.833:326.675,113.385:0.0,0.0:0.0,1.84135e-05,0.999985
-chr1	4809829	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=4809848;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:20,13,0,3:4,20:2,1|3,2:222.309:366.612,131.36:0.0,0.0:0.0,3.33137e-06,1.0	0/0:31:1.0:4,4:4-4,4-4:21,10,0,0:4,21:NULL:174.053:326.675,113.385:0.0,0.0:0.0,5.23654e-06,0.999995
-chr1	4809864	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4809903;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.88101:19,19:18-20,18-20:14,15,0,14:18,3|19,11:4,1|6,2|8,1|9,1|10,2|13,1|14,1|15,1|16,2|17,1|18,1:319.085:366.612,131.36:0.410384,0.410384:0.998451,0.00155301,1.22279e-11	0/2:43:0.997816:20,21:20-20,20-21:17,11,0,14:19,2|20,12|21,3:5,1|7,3|9,1|13,2|14,1|16,1|17,3|19,1|21,1:302.448:326.675,113.385:0.0990099,0.521285:9.21874e-20,2.73005e-07,1.0
-chr1	4810353	.	TTTGTTTGTTTG	.	.	.	END=4810364;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,16,0,2:3,24:2,2:248.206:366.612,131.36:0.0,0.0:0.0,2.23073e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:203.079:326.675,113.385:0.0,0.0:0.0,2.59322e-09,1.0
-chr1	4810746	.	CATGCATGCATG	.	.	.	END=4810757;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:25,25,0,0:3,25:NULL:311.433:366.612,131.36:0.0,0.0:0.0,1.80033e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.068:326.675,113.385:0.0,0.0:0.0,7.25219e-07,1.0
-chr1	4810950	.	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	.	.	END=4811123;RU=ttctcc;PERIOD=6;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.284642:15,19:7-15,7-21:3,3,0,14:15,3:4,1|5,2|6,2|7,3|8,2|9,1|10,1|13,1|19,1:141.767:366.612,131.36:3.80837,5.76309:1.0,0.0,0.0	3/4:51:0.181505:20,28:4-20,24-33:0,13,7,28:NULL:2,1|3,1|4,1|5,3|6,4|7,3|8,1|12,2|13,1|15,3|16,2|17,3|18,1|19,1|20,1:451.787:326.675,113.385:4.3648,2.33042:0.587313,0.412763,0.0
-chr1	4811609	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=4811650;RU=ga;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.795355:21,21:19-21,19-21:6,12,0,6:21,6:4,1|8,1|12,1|14,1|15,1|16,1:187.852:366.612,131.36:0.825531,0.825531:1.10236e-12,0.124233,0.875868	0/0:48:0.999961:21,21:19-21,19-21:25,13,0,9:19,2|20,2|21,21:5,1|8,1|11,2|12,2|16,1|17,1|21,1:310.978:326.675,113.385:0.339533,0.339533:0.0,4.87385e-05,0.999955
-chr1	4811806	.	TTTTGTTTTGTTTTG	.	.	.	END=4811820;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:26,9,0,3:3,26:2,3:205.931:366.612,131.36:0.0,0.0:0.0,2.39576e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:29,10,0,4:3,29:2,4:232.858:326.675,113.385:0.0,0.0:0.0,3.1766e-09,1.0
-chr1	4814327	.	AAATAAATAAAT	AAATAAAT	.	.	END=4814338;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:26:0.999999:2,3:2-2,2-3:12,14,0,0:2,9|3,3:NULL:181.575:366.612,131.36:0.0,0.36513:8.4454e-07,1.0,1.92825e-22	0/0:22:0.998738:3,3:3-3,3-3:13,9,0,0:3,13:NULL:134.801:326.675,113.385:0.0,0.0:6.24e-42,0.000728609,0.999272
-chr1	4815548	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4815577;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.978896:16,16:13-16,13-16:13,7,0,2:15,2|16,11:11,1|13,1:143.644:366.612,131.36:1.12671,1.12671:5.2269e-24,0.00115283,0.998853	0/0:38:0.99597:15,15:15-15,15-15:16,12,0,10:14,2|15,14:5,2|6,2|8,1|10,1|11,1|12,1|13,1|14,1:267.548:326.675,113.385:0.0990099,0.0990099:7.71523e-18,0.00342976,0.99658
-chr1	4817565	.	CAGCAGCAGCAG	.	.	.	END=4817576;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999968:4,4:4-4,4-4:19,22,0,0:4,19:NULL:273.457:366.612,131.36:0.0,0.0:0.0,3.97051e-05,0.999963	0/0:46:1.0:4,4:4-4,4-4:29,17,0,0:4,29:NULL:271.562:326.675,113.385:0.0,0.0:0.0,2.73496e-08,1.0
-chr1	4819449	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=4819472;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.630721:4,4:3-4,3-4:4,13,0,2:4,4:3,2:153.492:366.612,131.36:0.330165,0.330165:0.92114,0.0789544,1.7293e-13	0/0:38:0.999954:6,6:6-8,6-8:16,13,0,8:6,16:2,1|3,1|4,1|5,5:240.238:326.675,113.385:0.797014,0.797014:3e-45,2.72189e-05,0.999972
-chr1	4820555	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4820572;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99982:10,10:10-10,10-10:16,10,0,5:10,16:6,1|7,2|9,2:200.216:366.612,131.36:0.0,0.0:0.0,2.30314e-05,0.999979	0/2:62:0.351083:9,12:9-9,9-14:31,20,0,10:9,31:4,3|5,3|6,1|7,1|12,2:410.123:326.675,113.385:0.0,1.53456:0.0,1.54242e-14,1.0
-chr1	4822262	.	TGTTTGTTTGTT	TGTT	.	.	END=4822273;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.0821131:1,1:1-3,1-3:0,25,0,0:NULL:NULL:224.832:366.612,131.36:0.556749,0.556749:0.273043,0.514863,0.212099	0/0:43:1.0:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.716:326.675,113.385:0.0,0.0:0.0,6.86054e-07,1.0
-chr1	4822494	.	CACACACACACA	.	.	.	END=4822505;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:29,13,0,0:6,29:NULL:234.205:366.612,131.36:0.0,0.0:0.0,1.70101e-08,1.0	0/0:51:1.00001:6,6:6-7,6-7:23,20,0,7:6,23:4,1|5,5|6,1:327.044:326.675,113.385:0.169767,0.169767:0.0,2.23788e-07,1.0
-chr1	4823989	.	TGTCTGTCTGTCTGTCTGTCTGTC	TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC	.	.	END=4824012;RU=tgtc;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.00001:8,8:8-8,8-8:22,11,0,7:8,22:2,1|3,2|4,1|5,1|6,2:243.729:366.612,131.36:0.0990099,0.0990099:0.0,3.8867e-07,1.0	0/0:36:1.00001:6,6:6-6,6-6:21,12,0,3:6,21:3,1|5,2:217.679:326.675,113.385:0.0,0.0:0.0,1.83163e-06,1.0
-chr1	4831112	.	CTGGCTGGCTGG	.	.	.	END=4831123;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:275.992:366.612,131.36:0.0,0.0:0.0,5.25396e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:30,10,0,0:3,30:NULL:208.27:326.675,113.385:0.0,0.0:0.0,5.0826e-09,1.0
-chr1	4832670	.	CTCCCTCCCTCC	CTCCCTCCCTCCCTCC	.	.	END=4832681;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:25,23,0,2:3,25:2,2:329.873:366.612,131.36:0.0,0.0:0.0,1.7607e-07,1.0	0/1:48:0.359416:3,4:3-3,3-4:23,22,0,3:3,23:2,2|4,1:343.057:326.675,113.385:0.0,0.519212:0.0,5.03971e-08,1.0
-chr1	4835862	.	TTTTGTTTTGTTTTG	.	.	.	END=4835876;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:194.431:366.612,131.36:0.0,0.0:0.0,1.38502e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:199.012:326.675,113.385:0.0,0.0:0.0,2.26284e-08,1.0
-chr1	4836013	.	TTTCTTTTCTTTTCT	.	.	.	END=4836027;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.99706:3,3:3-3,3-3:11,10,0,2:3,11:2,2:144.957:366.612,131.36:0.0,0.0:4.62434e-36,0.00126048,0.998746	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:199.94:326.675,113.385:0.0,0.0:0.0,7.37652e-07,1.0
-chr1	4836682	.	TTTATTTATTTA	.	.	.	END=4836693;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999993:3,3:3-3,3-3:19,17,0,0:3,19:NULL:231.07:366.612,131.36:0.0,0.0:0.0,1.7298e-05,0.999986	0/0:33:0.999991:3,3:3-3,3-3:18,13,0,2:3,18:2,2:204.284:326.675,113.385:0.0,0.0:0.0,1.45272e-05,0.999987
-chr1	4837261	.	TTCATTCATTCATTCATTCA	TTCA	.	.	END=4837280;RU=ttca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0690482:1,1:1-1,1-1:0,16,0,0:NULL:NULL:142.057:366.612,131.36:0.19802,0.19802:0.394443,0.481659,0.12399	0/0:20:0.99859:5,5:5-5,5-5:13,7,0,0:5,13:NULL:113.046:326.675,113.385:0.0,0.0:8.49476e-37,0.000864304,0.999141
-chr1	4840709	.	AATAAATAAATA	.	.	.	END=4840720;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999165:3,3:3-3,3-3:13,16,0,0:3,13:NULL:199.55:366.612,131.36:0.0,0.0:1.36e-43,0.000665667,0.999339	0/0:22:0.951778:3,3:3-3,3-3:8,14,0,0:3,8:NULL:157.058:326.675,113.385:0.0,0.0:1.58998e-26,0.0305701,0.969486
-chr1	4841846	.	AAAGAAAGAAAG	AAAGAAAG	.	.	END=4841857;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.00001:2,2:2-2,2-2:22,14,0,0:2,22:NULL:212.561:366.612,131.36:0.0,0.0:1.0,7.47019e-07,0.0	0/0:20:0.999869:3,3:3-3,3-3:16,4,0,0:3,16:NULL:102.145:326.675,113.385:0.0,0.0:0.0,6.76053e-05,0.999933
-chr1	4843541	.	TTTGTTTGTTTG	.	.	.	END=4843552;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:240.43:366.612,131.36:0.0,0.0:0.0,1.4138e-08,1.0	0/0:26:1.00001:3,3:3-3,3-3:20,4,0,2:3,20:2,2:127.33:326.675,113.385:0.0,0.0:0.0,2.47031e-06,1.0
-chr1	4844779	.	AAAATAAAATAAAAT	.	.	.	END=4844793;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999617:3,3:3-3,3-3:15,11,0,0:3,15:NULL:162.206:366.612,131.36:0.0,0.0:6.3e-44,0.000244671,0.999758	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.43:326.675,113.385:0.0,0.0:0.0,2.47012e-06,1.0
-chr1	4845843	.	AAACAAACAAACAAACAAAC	.	.	.	END=4845862;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:5,5:5-5,5-5:23,27,0,2:5,23:3,1|4,1:355.553:366.612,131.36:0.0,0.0:0.0,5.15931e-07,1.0	0/0:36:0.999957:5,5:5-5,5-5:17,14,0,5:5,17:3,3|4,2:229.622:326.675,113.385:0.0,0.0:0.0,2.45349e-05,0.999978
-chr1	4846452	.	CCAACCAACCAA	.	.	.	END=4846463;RU=ccaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.981252:3,3:3-3,3-3:9,11,0,2:3,9:2,2:146.9:366.612,131.36:0.0,0.0:1.18375e-29,0.00809632,0.991921	0/0:21:0.99958:3,3:3-3,3-3:14,5,0,2:3,14:2,2:113.893:326.675,113.385:0.0,0.0:0.0,0.000159645,0.999842
-chr1	4848400	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4848435;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:7,7:7-7,7-7:21,25,0,5:7,21:3,1|4,2|5,1|6,1:348.189:366.612,131.36:0.0,0.0:1.0,1.1066e-06,0.0	0/0:34:0.977879:9,9:8-9,8-9:9,15,0,9:9,9:3,1|5,2|6,2|7,2|8,2:239.873:326.675,113.385:0.437216,0.437216:9.02383e-25,0.011419,0.988606
-chr1	4849030	.	AAAGAAAGAAAGAAAG	.	.	.	END=4849045;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:245.114:366.612,131.36:0.0,0.0:0.0,2.42971e-06,1.0	0/0:30:0.999962:4,4:4-4,4-4:18,12,0,0:4,18:NULL:181.991:326.675,113.385:0.0,0.0:0.0,4.23994e-05,0.999957
-chr1	4849772	.	CAACAACAACAACAACAACAACAACAA	CAACAACAACAACAA	.	.	END=4849798;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999796:5,5:5-5,5-5:16,10,0,0:5,16:NULL:158.209:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:38:1.0:9,9:9-9,9-9:20,14,0,3:9,20:4,1|5,1|7,1:234.633:326.675,113.385:0.0990099,0.0990099:0.0,1.02211e-05,0.999993
-chr1	4850587	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4850616;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.935192:22,24:22-26,24-26:7,7,0,11:22,2|24,5:4,1|8,1|10,2|13,1|16,1|18,1|19,1|20,1|23,1|24,1:190.511:366.612,131.36:1.82006,0.507951:0.0,0.0,1.0	0/0:27:0.504365:15,15:12-15,12-15:8,8,0,9:14,2|15,6:9,1|11,2|13,3|14,3:186.57:326.675,113.385:0.877565,0.877565:1.92327e-06,0.477716,0.522377
-chr1	4858043	.	GGGCCGGGCCGGGCCGGGCC	GGGCCGGGCCGGGCC	.	.	END=4858062;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:54:1.0:3,4:3-4,4-4:35,19,0,0:3,6|4,29:NULL:341.472:366.612,131.36:0.390807,0.0:0.0,1.0,3.05897e-06	0/0:46:1.0:4,4:4-4,4-4:31,11,0,4:4,31:3,4:261.334:326.675,113.385:0.0,0.0:0.0,2.28666e-09,1.0
-chr1	4858328	.	GCTGCTGCTGCT	.	.	.	END=4858339;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:29,23,0,3:4,29:3,3:364.467:366.612,131.36:0.0,0.0:0.0,5.83154e-09,1.0	0/0:40:1.0:4,4:4-4,4-4:30,10,0,0:4,30:NULL:212.965:326.675,113.385:0.0,0.0:0.0,7.88224e-09,1.0
-chr1	4859454	.	CAAACAAACAAA	.	.	.	END=4859465;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.997279:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.94:366.612,131.36:0.0,0.0:1.15188e-38,0.00183885,0.998169	0/0:9:0.96338:3,3:3-3,3-3:8,1,0,0:3,8:NULL:42.1661:326.675,113.385:0.0,0.0:2.92369e-26,0.0150861,0.984943
-chr1	4859713	.	CTCTCTCTCTCTCTCT	.	.	.	END=4859728;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997518:8,8:8-8,8-8:13,12,0,0:8,13:NULL:164.513:366.612,131.36:0.0,0.0:6.90662e-25,0.0017479,0.99826	0/0:26:0.957459:8,8:8-8,8-8:8,16,0,2:8,8:5,1|7,1:195.057:326.675,113.385:0.0,0.0:8.91426e-16,0.0212945,0.978746
-chr1	4861410	.	TTCTTTCTTTCT	.	.	.	END=4861421;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:224.402:366.612,131.36:0.0,0.0:0.0,2.06593e-08,1.0	0/0:23:0.999288:3,3:3-3,3-3:13,7,0,3:3,13:2,3:138.485:326.675,113.385:0.0,0.0:1.7e-44,0.000239742,0.999765
-chr1	4862097	.	ACACACACACACACACAC	.	.	.	END=4862114;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:9,9:9-9,9-9:26,20,0,4:9,26:6,1|7,2|8,1:325.837:366.612,131.36:0.172061,0.172061:0.0,4.50161e-08,1.0	0/0:34:0.988749:9,9:7-9,7-9:17,10,0,6:8,2|9,15:5,1|6,4|7,1:219.231:326.675,113.385:0.631028,0.631028:3.55181e-24,0.0112089,0.988814
-chr1	4862140	.	ACACACACACACAC	ACACACACACACACACAC	.	.	END=4862153;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.475531:7,9:7-7,8-9:16,22,0,5:7,16:8,4|9,1:320.291:366.612,131.36:0.0,0.510837:0.0,2.3204e-33,1.0	0/0:20:0.976578:7,7:7-7,7-7:9,11,0,0:7,9:NULL:141.55:326.675,113.385:0.0,0.0:2.90656e-20,0.0134479,0.986579
-chr1	4864608	.	AAACAAACAAAC	.	.	.	END=4864619;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,10,0,2:3,25:2,2:205.564:366.612,131.36:0.0,0.0:0.0,1.127e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:153.582:326.675,113.385:0.0,0.0:0.0,1.29397e-06,1.0
-chr1	4866501	.	CCAGGCTGGCCTCCAGGCTGGCCTCCAGGCTGGCCT	CCAGGCTGGCCTCCAGGCTGGCCT	.	.	END=4866536;RU=ccaggctggcct;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999145:2,2:2-2,2-2:13,12,0,0:2,13:NULL:158.09:366.612,131.36:0.0,0.0:0.999728,0.000272618,2.5201e-19	0/0:22:0.999134:3,3:3-3,3-3:14,6,0,2:3,14:2,2:130.066:326.675,113.385:0.0,0.0:1.10892e-17,0.000575615,0.99943
-chr1	4867295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4867334;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.102623:22,23:10-23,10-24:0,18,0,14:NULL:5,1|6,2|7,2|8,1|10,2|16,1|17,2|20,2|22,1:279.652:366.612,131.36:2.91557,2.97962:1.37974e-22,0.306397,0.693615	0/0:43:0.943524:20,20:7-21,7-21:9,20,0,11:20,9:7,1|8,3|10,1|12,1|13,1|15,3|19,1:314.66:326.675,113.385:6.33959,6.33959:2.54871e-11,0.028072,0.971984
-chr1	4867339	.	TACATACATACATACA	TACATACATACATACATACA	.	.	END=4867354;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999979:5,5:5-5,5-5:27,21,0,2:4,2|5,25:3,2:323.082:366.612,131.36:0.0,0.0:0.0,4.58403e-08,1.0	0/0:39:1.0:4,4:4-4,4-4:19,17,0,3:4,19:3,3:256.592:326.675,113.385:0.0,0.0:0.0,1.11741e-05,0.999993
-chr1	4870254	.	TATTTATTTATT	.	.	.	END=4870265;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999596:3,3:3-3,3-3:14,14,0,3:3,14:2,3:203.164:366.612,131.36:0.0,0.0:1e-45,0.000216245,0.999788	0/0:27:0.999891:3,3:3-3,3-3:16,8,0,3:3,16:2,3:156.429:326.675,113.385:0.0,0.0:0.0,4.43e-05,0.999956
-chr1	4871522	.	TCCTCCTCCTCC	.	.	.	END=4871533;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:4,4:4-4,4-4:31,29,0,0:4,31:NULL:387.375:366.612,131.36:0.0,0.0:0.0,6.72445e-09,1.0	0/0:47:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:253.255:326.675,113.385:0.0,0.0:0.0,5.23008e-10,1.0
-chr1	4874307	.	GGAAGGAAGGAA	.	.	.	END=4874318;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999255:3,3:3-3,3-3:14,13,0,0:3,14:NULL:179.186:366.612,131.36:0.0,0.0:1e-45,0.000496271,0.999507	0/0:22:0.999929:3,3:3-3,3-3:17,5,0,0:3,17:NULL:113.657:326.675,113.385:0.0,0.0:0.0,3.86341e-05,0.999963
-chr1	4874466	.	AACAACAACAACAAC	AACAACAACAAC	.	.	END=4874480;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:37:0.993994:4,5:4-5,5-5:17,20,0,0:4,3|5,14:NULL:266.538:366.612,131.36:0.398507,0.0:1.51296e-36,0.993994,0.00601875	0/0:20:0.993029:5,5:4-5,4-5:11,8,0,0:5,11:NULL:115.916:326.675,113.385:0.492866,0.492866:1.06517e-32,0.00475677,0.995257
-chr1	4877242	.	TATTTATTTATTTATT	TATT,TATTTATTTATT	.	.	END=4877257;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:6:0.0150407:1,3:1-3,1-3:0,6,0,0:NULL:NULL:53.3083:366.612,131.36:0.825769,0.877677:0.0641034,0.438012,0.498075	0/0:18:0.999635:4,4:4-4,4-4:15,3,0,0:4,15:NULL:86.5963:326.675,113.385:0.0,0.0:3e-45,0.000210023,0.99979
-chr1	4878697	.	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	.	.	END=4878766;RU=ctctt;PERIOD=5;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.98803:13,13:13-13,13-13:10,13,0,11:13,10:2,2|4,1|6,1|8,1|9,2|10,1|11,3:246.043:366.612,131.36:0.0,0.0:0.996172,0.00383706,7.51694e-21	0/0:27:0.869346:14,14:13-14,13-14:6,9,0,11:14,6:2,1|3,2|5,2|7,1|10,1|11,1|12,3:187.457:326.675,113.385:0.495841,0.495841:3.7595e-17,0.0802297,0.919866
-chr1	4878791	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	END=4878822;RU=ctcc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.227777:10,10:3-10,3-10:5,14,0,0:10,5:NULL:149.658:366.612,131.36:3.15514,3.15514:4.32064e-13,0.665501,0.334514	0/0:13:0.385621:8,8:6-8,6-8:3,10,0,0:8,3:NULL:108.263:326.675,113.385:0.592572,0.592572:5.86256e-05,0.414281,0.585739
-chr1	4880388	.	CTTCTTCTTCTT	.	.	.	END=4880399;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99948:4,4:4-4,4-4:15,16,0,0:4,15:NULL:206.169:366.612,131.36:0.0,0.0:0.0,0.000409236,0.999591	0/0:36:1.0:4,4:4-4,4-4:23,13,0,0:4,23:NULL:208.752:326.675,113.385:0.0,0.0:0.0,1.05248e-06,1.0
-chr1	4881181	.	TGTTTTGTTTTGTTT	.	.	.	END=4881195;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:27,27,0,0:3,27:NULL:352.532:366.612,131.36:0.0,0.0:0.0,1.58999e-07,1.0	0/0:21:0.999866:3,3:2-3,2-3:16,4,0,0:3,16:NULL:98.8823:326.675,113.385:0.44763,0.44763:0.0,7.15648e-05,0.999932
-chr1	4882279	.	TTATTATTATTA	.	.	.	END=4882290;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.407704:4,4:3-4,3-4:3,11,0,0:4,3:NULL:117.024:366.612,131.36:0.169767,0.169767:7.928e-10,0.348483,0.65155	0/0:14:0.910161:4,4:4-4,4-4:7,7,0,0:4,7:NULL:89.739:326.675,113.385:0.0,0.0:1.5882e-21,0.056422,0.943661
-chr1	4885247	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATC,TATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=4885286;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.950189:8,9:8-10,9-9:15,17,0,3:8,3|9,12:4,1|6,1|7,1:247.157:366.612,131.36:0.653465,0.0:0.999994,7.2535e-06,3.8647e-26	0/0:34:0.973807:10,10:10-11,10-11:9,15,0,9:10,9:3,2|4,1|6,2|7,2|9,2:249.563:326.675,113.385:0.425627,0.425627:4.41641e-18,0.0157938,0.984241
-chr1	4885324	.	TTAGTTAGTTAGTTAGTTAGTTAG	TTAGTTAGTTAGTTAGTTAG,TTAGTTAGTTAGTTAGTTAGTTAGTTAG	.	.	END=4885347;RU=ttag;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:38:0.874592:5,7:5-7,7-7:18,12,0,7:5,2|7,16:3,4|4,3:251.737:366.612,131.36:0.899738,0.0:6.23911e-39,0.87467,0.125428	0/0:33:0.998726:6,6:5-6,5-6:13,13,0,6:6,13:3,2|5,4:218.947:326.675,113.385:0.40582,0.40582:1.3011e-26,0.000756045,0.999248
-chr1	4890962	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4890997;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.0:8,8:8-8,8-8:19,7,0,7:8,19:2,1|3,4|6,1|7,1:192.509:366.612,131.36:0.0,0.0:0.999993,9.55034e-06,7.84969e-35	0/0:38:1.00001:9,9:9-9,9-9:22,10,0,5:9,22:2,1|3,1|4,1|8,2:219.858:326.675,113.385:0.0990099,0.0990099:0.0,1.1242e-06,1.0
-chr1	4894530	.	GTTGGTTGGTTG	.	.	.	END=4894541;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:23,21,0,2:3,23:2,2:290.005:366.612,131.36:0.0,0.0:0.0,5.67316e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:213.064:326.675,113.385:0.0,0.0:0.0,4.05818e-07,1.0
-chr1	4895853	.	CTCACTCACTCA	.	.	.	END=4895864;RU=ctca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999177:3,3:3-3,3-3:13,11,0,0:3,13:NULL:150.405:366.612,131.36:0.0,0.0:7.8e-44,0.000490639,0.999514	0/0:32:0.999992:3,3:3-3,3-3:18,14,0,0:3,18:NULL:199.106:326.675,113.385:0.0,0.0:0.0,1.80082e-05,0.999985
-chr1	4899661	.	ACACACACACACACAC	ACACACACACACAC	.	.	END=4899676;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.00001:7,7:7-7,7-7:22,19,0,4:7,22:5,1|6,2|7,1:294.528:366.612,131.36:0.0990099,0.0990099:1.0,1.37938e-06,1.61122e-33	0/0:41:0.999948:8,8:8-8,8-8:26,12,0,2:7,2|8,24:6,2:240.928:326.675,113.385:0.0990099,0.0990099:3.6123e-41,5.54085e-05,0.999948
-chr1	4902415	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=4902432;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.881129:9,9:8-10,8-10:7,11,0,2:9,7:6,1|8,1:146.361:366.612,131.36:0.696456,0.696456:1.12057e-12,0.0606104,0.939477	0/0:24:0.99869:9,9:9-12,9-12:14,7,0,2:9,14:7,2:137.093:326.675,113.385:1.27688,1.27688:1.593e-24,0.000449994,0.999553
-chr1	4902708	.	TGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG	.	.	END=4902725;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.413074:7,7:5-7,5-7:3,14,0,2:7,3:5,2:154.668:366.612,131.36:0.634282,0.634282:0.822065,0.178005,7.49676e-08	0/0:16:0.866791:9,9:9-10,9-10:7,8,0,0:9,7:NULL:102.351:326.675,113.385:0.486863,0.486863:2.29488e-12,0.0699126,0.930182
-chr1	4903639	.	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	.	.	END=4903674;RU=tttttg;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.239431:7,7:4-7,4-7:2,10,0,0:7,2:NULL:101.832:366.612,131.36:0.949876,0.949876:3.28881e-07,0.444397,0.555709	0/0:28:0.999917:6,6:6-6,6-6:17,9,0,2:6,17:3,1|5,1:173.895:326.675,113.385:0.0,0.0:0.0,6.41162e-05,0.99994
-chr1	4903855	.	TTTGTTTGTTTG	.	.	.	END=4903866;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:185.345:366.612,131.36:0.0,0.0:0.0,7.09136e-06,0.999994	0/0:24:0.990731:3,3:3-3,3-3:10,14,0,0:3,10:NULL:170.769:326.675,113.385:0.0,0.0:5.87266e-34,0.00569124,0.994324
-chr1	4905039	.	TACATACATACA	.	.	.	END=4905050;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:23,13,0,0:3,23:NULL:208.626:366.612,131.36:0.0,0.0:0.0,6.88669e-07,1.0	0/0:28:1.0:3,3:3-3,3-3:19,6,0,3:3,19:2,3:151.536:326.675,113.385:0.0,0.0:0.0,5.64564e-06,0.999995
-chr1	4905095	.	TGGATGGATGGA	.	.	.	END=4905106;RU=tgga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999923:3,3:3-3,3-3:17,12,0,0:3,17:NULL:174.614:366.612,131.36:0.0,0.0:0.0,4.30267e-05,0.999957	0/0:31:1.0:3,3:3-3,3-3:25,4,0,2:3,25:2,2:148.365:326.675,113.385:0.0,0.0:0.0,8.21081e-08,1.0
-chr1	4909777	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4909828;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.430922:25,27:13-25,13-27:9,7,0,15:25,9:5,1|6,1|7,1|10,1|14,1|15,1|16,1|17,2|19,3|23,1|25,1|27,1:229.804:366.612,131.36:4.01858,5.57861:4.85751e-06,0.999988,1.00647e-05	0/3:37:0.321447:26,36:25-26,25-36:5,15,0,17:25,2|26,3:6,3|11,1|12,2|13,2|14,2|15,1|17,1|20,1|22,1|24,1|25,1|33,1:305.858:326.675,113.385:0.284901,4.78637:2.06714e-08,0.0110324,0.988992
-chr1	4909833	.	ATGCATGCATGC	.	.	.	END=4909844;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997586:3,3:3-3,3-3:12,13,0,0:3,12:NULL:161.285:366.612,131.36:0.0,0.0:1.12194e-39,0.00116656,0.998838	0/0:33:0.999905:3,3:3-3,3-3:16,17,0,0:3,16:NULL:217.664:326.675,113.385:0.0,0.0:0.0,7.34374e-05,0.999926
-chr1	4914303	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4914366;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.963093:13,13:13-13,13-13:8,20,0,13:13,8:3,1|4,2|5,1|8,1|9,1|10,2|11,1|12,4:314.081:366.612,131.36:0.0,0.0:0.995673,0.00433868,3.36631e-24	0/0:26:0.640366:16,16:15-16,15-16:4,12,0,9:16,4:3,1|5,1|9,1|12,1|13,3|14,1|15,1:192.607:326.675,113.385:0.499779,0.499779:4.19595e-09,0.200213,0.79983
-chr1	4914896	.	GGAGGAGGAGGA	.	.	.	END=4914907;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:21,28,0,0:4,21:NULL:340.103:366.612,131.36:0.0,0.0:0.0,6.01108e-06,0.999995	0/0:23:0.93709:4,4:4-4,4-4:8,15,0,0:4,8:NULL:166.795:326.675,113.385:0.0,0.0:8.34997e-25,0.0488196,0.951257
-chr1	4916037	.	TACATACATACATACA	.	.	.	END=4916052;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:4,4:4-4,4-4:30,25,0,3:4,30:3,3:372.561:366.612,131.36:0.0,0.0:0.0,5.3936e-09,1.0	0/0:48:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,2|4,1:275.235:326.675,113.385:0.0,0.0:0.0,7.53442e-10,1.0
-chr1	4918464	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	.	END=4918491;RU=ggag;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.974661:7,7:7-7,7-7:9,16,0,3:7,9:2,1|3,1|6,1:208.115:366.612,131.36:0.0,0.0:4.71002e-17,0.0165889,0.983445	0/0:23:0.935308:7,7:7-7,7-7:8,15,0,0:7,8:NULL:175.432:326.675,113.385:0.29703,0.29703:2.75131e-15,0.0517317,0.948348
-chr1	4918494	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GA,GAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4918545;RU=ga;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:5:0.00284588:1,9:1-13,1-13:0,5,0,0:NULL:NULL:45.8483:366.612,131.36:4.3402,4.33937:0.395201,0.511789,0.0931213	3/0:28:0.930118:25,26:21-26,21-26:6,14,0,7:25,3|26,3:5,1|8,2|10,2|11,1|21,1:212.74:326.675,113.385:1.98598,1.86701:0.00122754,0.952779,0.0460742
-chr1	4920839	.	TTATTATTATTA	.	.	.	END=4920850;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999195:4,4:2-4,2-4:14,7,0,0:4,14:NULL:119.597:366.612,131.36:0.973726,0.973726:7.7e-44,0.000479133,0.999523	0/0:18:0.998916:4,4:4-4,4-4:13,3,0,2:4,13:3,2:92.8638:326.675,113.385:0.0,0.0:9.477e-41,0.000412151,0.999591
-chr1	4920879	.	TGGCTGGCTGGC	.	.	.	END=4920890;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999941:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.755:366.612,131.36:0.0,0.0:4.2e-44,3.98504e-05,0.999963	0/0:18:0.995248:3,3:3-3,3-3:11,7,0,0:3,11:NULL:106.999:326.675,113.385:0.0,0.0:7.72716e-29,0.00241556,0.997593
-chr1	4920889	.	GCCAGCCAGCCA	.	.	.	END=4920900;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:3,3:3-3,3-3:19,8,0,0:3,19:NULL:148.616:366.612,131.36:0.0,0.0:0.0,9.76148e-06,0.999993	0/0:18:0.995246:3,3:3-3,3-3:11,7,0,0:3,11:NULL:107.018:326.675,113.385:0.0,0.0:3.17835e-37,0.00238722,0.997618
-chr1	4921013	.	ATTTATTTATTT	.	.	.	END=4921024;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.906659:3,3:3-3,3-3:6,20,0,0:3,6:NULL:204.332:366.612,131.36:0.0,0.0:1.3993e-19,0.0448965,0.955176	0/0:18:0.983079:3,3:3-3,3-3:9,9,0,0:3,9:NULL:115.759:326.675,113.385:0.0,0.0:8.49186e-29,0.00831875,0.991703
-chr1	4921202	.	TTCTTCTTCTTC	.	.	.	END=4921213;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999931:4,4:4-4,4-4:17,13,0,0:4,17:NULL:190.356:366.612,131.36:0.0,0.0:0.0,3.68238e-05,0.999964	0/0:16:0.996708:4,4:4-4,4-4:12,4,0,0:4,12:NULL:86.1021:326.675,113.385:0.0,0.0:6.54629e-39,0.00186305,0.998141
-chr1	4921293	.	ATTTATTTATTTATTT	.	.	.	END=4921308;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.983004:4,4:4-4,4-4:9,19,0,3:4,9:3,3:231.443:366.612,131.36:0.0,0.0:1.93803e-24,0.00857355,0.991448	0/0:24:0.996908:4,4:4-4,4-4:12,12,0,0:4,12:NULL:152.192:326.675,113.385:0.0,0.0:2.11086e-32,0.00229159,0.997715
-chr1	4922764	.	AAATAAATAAAT	.	.	.	END=4922775;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999992:3,3:3-3,3-3:18,12,0,0:3,18:NULL:180.383:366.612,131.36:0.0,0.0:0.0,1.69412e-05,0.999986	0/0:25:0.999375:3,3:3-3,3-3:14,9,0,2:3,14:2,2:161.812:326.675,113.385:0.0,0.0:1e-45,0.000258235,0.999743
-chr1	4925089	.	ATTCATTCATTCATTCATTC	.	.	.	END=4925108;RU=attc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.00001:5,5:5-5,5-5:21,26,0,3:5,21:4,3:340.176:366.612,131.36:0.0,0.0:0.0,2.28456e-06,1.0	0/0:51:1.0:5,5:5-5,5-5:25,19,0,7:5,25:3,1|4,5|5,1:319.377:326.675,113.385:0.0,0.0:0.0,7.26226e-08,1.0
-chr1	4930713	.	ATCTATCTATCT	.	.	.	END=4930724;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:30,21,0,4:3,30:2,4:335.927:366.612,131.36:0.0,0.0:0.0,3.17815e-09,1.0	0/0:30:0.999985:3,3:3-3,3-3:18,12,0,0:3,18:NULL:177.406:326.675,113.385:0.0,0.0:0.0,2.00988e-05,0.99998
-chr1	4931717	.	AGAGAGAGAGAGAG	AGAGAGAGAGAG	.	.	END=4931730;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:61:1.0:6,7:6-6,7-7:32,29,0,0:6,13|7,19:NULL:403.191:366.612,131.36:0.0990099,0.0:7.75488e-31,1.0,1.62485e-09	0/0:50:1.00001:7,7:7-8,7-8:22,21,0,6:7,22:5,4|6,2:328.993:326.675,113.385:0.21692,0.21692:1e-45,1.63351e-06,1.0
-chr1	4931731	.	ACACACACACAC	.	.	.	END=4931742;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.00001:6,6:5-7,5-7:20,31,0,5:6,20:5,3|6,2:390.258:366.612,131.36:0.342408,0.342408:0.0,1.01925e-06,1.0	0/0:41:1.0:6,6:6-6,6-6:21,20,0,0:6,21:NULL:267.481:326.675,113.385:0.0,0.0:0.0,8.48974e-06,0.999994
-chr1	4935229	.	CTCCCTCCCTCCCTCC	.	.	.	END=4935244;RU=ctcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:301.091:366.612,131.36:0.0990099,0.0990099:0.0,3.72473e-08,1.0	0/0:35:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:198.54:326.675,113.385:0.0,0.0:0.0,1.37551e-06,1.0
-chr1	4936747	.	AAACAAACAAAC	.	.	.	END=4936758;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:293.25:366.612,131.36:0.0,0.0:0.0,2.01391e-08,1.0	0/0:34:1.00001:3,3:3-3,3-3:22,10,0,2:3,22:2,2:194.602:326.675,113.385:0.0,0.0:0.0,8.6363e-07,1.0
-chr1	4937389	.	AACAACAACAACAACAAC	.	.	.	END=4937406;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:6,6:6-6,6-6:31,15,0,2:6,31:5,2:276.512:366.612,131.36:0.0,0.0:0.0,3.35845e-09,1.0	0/0:45:1.0:6,6:6-6,6-6:25,13,0,6:6,25:4,2|5,4:264.154:326.675,113.385:0.0,0.0:0.0,9.31293e-08,1.0
-chr1	4938098	.	AGAAAGAAAGAA	.	.	.	END=4938109;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:218.478:366.612,131.36:0.0,0.0:0.0,2.99825e-06,1.0	0/0:18:0.999394:3,3:3-3,3-3:14,4,0,0:3,14:NULL:92.2743:326.675,113.385:0.0,0.0:1e-45,0.000270359,0.999734
-chr1	4940874	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4940918;RU=aaaac;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.976025:9,9:8-9,8-9:9,14,0,9:9,9:2,1|3,1|4,2|5,2|6,2|8,1:234.928:366.612,131.36:0.46122,0.46122:4.70087e-25,0.0183276,0.98171	0/0:19:0.98792:9,9:9-9,9-9:10,5,0,4:9,10:3,1|5,1|6,1|7,1:119.203:326.675,113.385:0.0,0.0:6.96937e-28,0.00650601,0.993511
-chr1	4941227	.	TTGTTGTTGTTG	.	.	.	END=4941238;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:20,11,0,3:4,20:3,3:202.89:366.612,131.36:0.0,0.0:0.0,4.02136e-06,0.999995	0/0:25:0.999974:4,4:4-4,4-4:18,7,0,0:4,18:NULL:140.213:326.675,113.385:0.0,0.0:0.0,3.12652e-05,0.999971
-chr1	4941826	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4941867;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:48:0.869733:20,21:20-22,20-22:13,22,0,12:20,7|21,4|22,2:6,1|7,1|9,1|13,2|14,1|15,2|18,1|19,2|21,1:379.236:366.612,131.36:0.575281,0.55233:1.04935e-10,0.99145,0.00856707	0/2:38:0.304313:21,26:20-22,20-27:7,17,0,13:20,3|21,4:5,1|6,1|9,2|11,1|15,2|16,1|17,1|18,1|19,1|21,1|26,1:297.187:326.675,113.385:0.393557,2.53527:5.53095e-16,0.00150292,0.998504
-chr1	4943920	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=4943943;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:0.93824:12,12:11-12,11-12:18,32,0,14:11,4|12,14:4,1|5,2|6,2|8,1|9,3|10,3|11,2:491.696:366.612,131.36:0.460582,0.460582:1.00657e-17,0.0617049,0.938387	0/0:40:0.994255:12,12:9-12,9-12:12,17,0,9:12,12:4,2|5,1|6,1|7,1|8,1|9,3:280.274:326.675,113.385:1.09539,1.09539:4.15738e-18,0.00303051,0.99698
-chr1	4944834	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=4944857;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:6,6:6-6,6-6:24,24,0,10:6,24:2,1|3,3|4,4|5,2:388.368:366.612,131.36:0.0,0.0:0.0,2.95896e-07,1.0	0/0:28:0.99596:6,6:6-6,6-6:11,13,0,4:6,11:2,1|4,2|5,1:196.374:326.675,113.385:0.0,0.0:9.78336e-31,0.00239827,0.997609
-chr1	4946471	.	ATAACATATAACATATAACAT	.	.	.	END=4946491;RU=ataacat;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:25,20,0,0:3,25:NULL:283.248:366.612,131.36:0.0,0.0:0.0,3.02506e-07,1.0	0/0:23:0.999471:3,3:3-3,3-3:14,7,0,2:3,14:2,2:133.637:326.675,113.385:0.0,0.0:2.875e-42,0.000263905,0.999736
-chr1	4957150	.	AAACAAACAAAC	.	.	.	END=4957161;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:33,12,0,2:3,33:2,2:253.018:366.612,131.36:0.0,0.0:0.0,3.93596e-10,1.0	0/0:30:1.0:3,3:3-3,3-3:25,5,0,0:3,25:NULL:146.34:326.675,113.385:0.0,0.0:0.0,1.3194e-07,1.0
-chr1	4958201	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=4958218;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:33,9,0,0:3,33:NULL:219.278:366.612,131.36:0.0,0.0:0.0,5.27952e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:28,4,0,0:3,28:NULL:148.516:326.675,113.385:0.0,0.0:0.0,1.95092e-08,1.0
-chr1	4960946	.	ACACACACACACACACACACACAC	.	.	.	END=4960969;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.998459:12,12:12-13,12-13:14,14,0,5:12,14:5,2|9,2|11,1:228.619:366.612,131.36:0.19802,0.19802:9.682e-23,0.000546971,0.999454	0/0:29:0.991119:12,12:10-12,10-12:11,11,0,5:12,11:4,1|5,3|10,1:182.992:326.675,113.385:0.788731,0.788731:3.74833e-18,0.0052448,0.994768
-chr1	4967461	.	GGTGGTGGTGGT	.	.	.	END=4967472;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:4-4,4-4:30,22,0,2:4,30:3,2:335.899:366.612,131.36:0.0,0.0:0.0,5.93903e-09,1.0	0/0:38:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:231.014:326.675,113.385:0.0,0.0:0.0,2.10865e-06,1.0
-chr1	4967521	.	CTTGCTTGCTTG	.	.	.	END=4967532;RU=cttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:33,16,0,0:3,33:NULL:276.484:366.612,131.36:0.0990099,0.0990099:0.0,7.17683e-10,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:210.541:326.675,113.385:0.0,0.0:0.0,1.61021e-06,1.0
-chr1	4976938	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4976965;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:47:0.0489368:27,27:25-29,25-29:0,17,0,29:NULL:5,2|6,2|7,3|9,2|10,1|11,1|12,1|13,3|14,2|15,1|17,3|20,1|21,2|23,2|24,1|26,1|27,1:379.606:366.612,131.36:0.896245,0.896245:0.0,0.0,1.0	0/1:64:0.794639:14,15:14-14,14-15:35,14,0,15:13,2|14,31|15,2:5,2|6,1|7,3|8,4|9,1|11,2|12,1|15,1:416.39:326.675,113.385:0.0,0.498798:1.45964e-38,2.05051e-08,1.0
-chr1	4977099	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4977144;RU=ag;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0233624:22,22:21-26,21-26:0,9,0,9:NULL:6,1|8,1|11,1|12,2|13,2|18,1|22,1:149.084:366.612,131.36:1.98761,1.98761:0.11419,0.539167,0.346797	0/2:23:0.467761:23,24:22-24,22-24:8,11,0,4:22,2|23,4|24,2:6,1|10,1|13,1|21,1:180.98:326.675,113.385:0.479355,0.832743:0.00041485,0.339338,0.660268
-chr1	4977990	.	TCATCATCATCATCA	.	.	.	END=4978004;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999972:5,5:4-5,4-5:30,19,0,4:4,2|5,28:4,4:338.446:366.612,131.36:0.195027,0.195027:0.0,2.72889e-05,0.999972	0/0:31:0.999902:5,5:5-5,5-5:17,12,0,2:5,17:4,2:199.785:326.675,113.385:0.0,0.0:0.0,6.39382e-05,0.99994
-chr1	4983563	.	CATCATCATCAT	.	.	.	END=4983574;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:4,4:4-4,4-4:30,26,0,2:4,30:3,2:372.273:366.612,131.36:0.0,0.0:0.0,5.35047e-09,1.0	0/0:43:1.0:4,4:4-4,4-4:26,14,0,3:4,26:3,3:252.485:326.675,113.385:0.0,0.0:0.0,5.93857e-08,1.0
-chr1	4985196	.	TTTGTTTGTTTG	.	.	.	END=4985207;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:3,3:3-3,3-3:19,5,0,0:3,19:NULL:117.877:366.612,131.36:0.0,0.0:0.0,7.5934e-06,0.999994	0/0:44:1.0:3,3:3-3,3-3:30,11,0,3:3,30:2,3:240.878:326.675,113.385:0.0,0.0:0.0,2.65166e-09,1.0
-chr1	4996877	.	TATATATATATATATATA	TATATATATATATA	.	.	END=4996894;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.447467:7,7:5-7,5-7:4,19,0,0:7,4:NULL:192.185:366.612,131.36:0.658248,0.658248:0.876695,0.123405,3.28883e-09	0/0:15:0.909:9,9:5-9,5-9:8,6,0,0:9,8:NULL:85.502:326.675,113.385:1.94745,1.94745:2.03074e-09,0.0722748,0.92782
-chr1	4998367	.	CTCCCTCCCTCC	.	.	.	END=4998378;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:127.455:366.612,131.36:0.0,0.0:0.0,8.23697e-06,0.999994	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:148.076:326.675,113.385:0.0,0.0:0.0,9.50006e-06,0.999993
-chr1	5001697	.	TTTTGTTTTGTTTTG	.	.	.	END=5001711;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999987:3,3:3-3,3-3:19,21,0,0:3,19:NULL:274.069:366.612,131.36:0.0,0.0:0.0,1.95025e-05,0.99998	0/0:28:0.999795:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.747:326.675,113.385:0.0,0.0:0.0,0.000154956,0.999849
-chr1	5003140	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=5003167;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999859:13,13:13-13,13-13:23,24,0,3:12,2|13,21:8,1|9,1|10,1:344.393:366.612,131.36:0.0,0.0:1.0,1.05659e-06,1.4696e-27	0/0:46:0.998635:14,14:13-14,13-14:20,17,0,8:13,2|14,18:7,1|8,1|9,1|10,1|12,2|13,2:305.347:326.675,113.385:0.19802,0.19802:3.33707e-24,0.00138137,0.998625
-chr1	5005661	.	GAGGAGGAGGAG	.	.	.	END=5005672;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992028:4,4:4-4,4-4:11,11,0,0:4,11:NULL:141.326:366.612,131.36:0.0,0.0:1.67609e-36,0.00433231,0.99568	0/0:54:1.0:4,4:4-4,4-4:28,19,0,7:4,28:3,7:339.99:326.675,113.385:0.0,0.0:0.0,1.08848e-08,1.0
-chr1	5007022	.	TTTATTTTATTTTAT	.	.	.	END=5007036;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998728:3,3:3-3,3-3:13,12,0,0:3,13:NULL:164.765:366.612,131.36:0.0,0.0:1.547e-42,0.000819146,0.999187	0/0:20:0.999989:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.73:326.675,113.385:0.0,0.0:0.0,1.56403e-05,0.999986
-chr1	5008480	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=5008511;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999985:7,7:7-7,7-7:18,17,0,7:7,18:2,1|4,5|6,1:280.991:366.612,131.36:0.0,0.0:0.999987,1.30011e-05,1.28651e-33	0/0:43:1.0:8,8:8-8,8-8:20,15,0,8:8,20:3,1|4,3|5,1|6,2|7,1:279.858:326.675,113.385:0.0,0.0:0.0,5.71248e-06,0.999995
-chr1	5011517	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA	.	.	END=5011560;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.781628:21,21:20-21,20-21:10,16,0,16:20,2|21,8:4,1|5,1|6,1|7,2|8,2|11,2|14,1|15,1|16,2|17,1|18,1|19,1:329.553:366.612,131.36:0.35561,0.35561:0.986623,0.0134052,2.41062e-08	0/0:37:0.998362:22,22:22-22,22-22:14,7,0,14:22,14:5,2|8,1|13,2|14,1|17,2|18,2|20,1|21,2|22,1:244.354:326.675,113.385:0.139319,0.139319:5.65472e-23,0.000382178,0.999621
-chr1	5011684	.	AAAACAAAACAAAACAAAAC	.	.	.	END=5011703;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:4,4:4-4,4-4:17,19,0,3:4,17:2,1|3,2:265.456:366.612,131.36:0.0,0.0:0.0,4.14353e-05,0.999963	0/0:29:1.0:4,4:4-4,4-4:19,7,0,3:4,19:3,3:161.314:326.675,113.385:0.0,0.0:0.0,5.98742e-06,0.999995
-chr1	5012007	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=5012062;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.0683737:10,12:1-13,1-13:0,18,0,7:NULL:5,1|6,1|7,2|8,1|12,2:219.863:366.612,131.36:3.69494,2.58175:0.597251,0.37845,0.0244016	0/0:25:0.882252:14,14:14-14,14-14:6,11,0,8:14,6:5,2|8,1|11,3|12,2:186.386:326.675,113.385:0.355334,0.355334:4.35448e-15,0.0746844,0.92541
-chr1	5013650	.	CAGAGCAGAGCAGAGCAGAGCAGAGCAGAG	CAGAGCAGAGCAGAGCAGAGCAGAG	.	.	END=5013679;RU=cagag;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999973:5,5:5-5,5-5:18,12,0,2:5,18:4,2:195.346:366.612,131.36:0.0,0.0:0.999986,1.7778e-05,5.31604e-39	0/0:32:0.925409:6,6:5-6,5-6:19,9,0,4:5,2|6,17:3,2|4,1|5,1:194.947:326.675,113.385:0.442564,0.442564:0.0,0.0746917,0.925404
-chr1	5014848	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5014891;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:0.591369:26,26:25-27,25-27:11,24,0,26:25,3|26,8:5,3|6,1|9,2|10,2|13,2|15,1|16,2|17,2|18,3|20,5|21,1|22,1|24,1:478.783:366.612,131.36:0.515042,0.515042:0.0,0.0,1.0	0/0:61:0.836759:22,22:21-23,21-23:18,23,0,18:21,3|22,12|23,3:6,1|7,1|8,1|9,1|10,2|11,2|14,1|15,1|16,1|17,3|18,1|21,3:450.295:326.675,113.385:0.661665,0.661665:1.00629e-12,0.0123263,0.987699
-chr1	5019542	.	CGCTCGCTCGCT	.	.	.	END=5019553;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:3,3:3-3,3-3:28,33,0,3:3,28:2,3:436.889:366.612,131.36:0.0,0.0:0.0,1.82732e-08,1.0	0/0:57:1.0:3,3:3-3,3-3:37,18,0,2:3,37:2,2:329.618:326.675,113.385:0.0,0.0:0.0,5.87802e-11,1.0
-chr1	5020039	.	GCCAGCCAGCCA	.	.	.	END=5020050;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:81:1.0:3,3:3-3,3-3:50,31,0,0:3,50:NULL:489.516:366.612,131.36:0.0,0.0:0.0,1.08271e-14,1.0	0/0:64:1.0:3,3:3-3,3-3:53,11,0,0:3,53:NULL:310.857:326.675,113.385:0.0,0.0:0.0,1.15808e-15,1.0
-chr1	5022514	.	TTGTTGTTGTTG	.	.	.	END=5022525;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999007:4,4:4-4,4-4:14,13,0,0:4,14:NULL:169.733:366.612,131.36:0.0,0.0:0.0,0.000700097,0.999302	0/0:32:1.00001:4,4:4-4,4-4:21,11,0,0:4,21:NULL:181.785:326.675,113.385:0.0,0.0:0.0,3.66862e-06,1.0
-chr1	5023422	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5023467;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:0.928802:18,18:17-18,17-18:20,29,0,12:17,5|18,15:5,1|6,1|8,1|10,3|11,2|12,1|13,1|14,2:459.163:366.612,131.36:0.36513,0.36513:1.0,0.0,0.0	0/0:71:0.990676:23,23:12-23,12-23:17,30,0,22:22,3|23,14:4,1|6,2|7,3|8,3|9,1|11,2|12,3|13,1|15,1|17,2|21,3:533.46:326.675,113.385:5.35709,5.35709:2.13956e-14,0.00902075,0.991
-chr1	5024078	.	AATAATAATAATAATAATAATAATAATAATAATAATAATAAT	.	.	.	END=5024119;RU=aat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.867285:14,14:14-14,14-14:6,9,0,8:14,6:6,2|8,3|12,1|13,2:167.018:366.612,131.36:0.0,0.0:8.86682e-10,0.0435721,0.956499	0/0:21:0.719744:14,14:12-14,12-14:5,5,0,9:14,5:4,1|5,1|6,2|8,1|9,1|10,1|11,1|13,1:140.5:326.675,113.385:0.765136,0.765136:3.24644e-08,0.164517,0.835557
-chr1	5026610	.	CTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5026631;RU=ct;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:40:0.995281:9,13:9-9,12-13:10,23,0,4:9,8|13,2:4,1|7,1|10,1|12,1:294.328:366.612,131.36:0.0,0.611622:1.05571e-11,1.0,2.1268e-14	0/0:22:0.996622:11,11:11-12,11-12:12,6,0,3:11,12:8,1|10,2:129.641:326.675,113.385:0.284901,0.284901:1.52129e-18,0.00103294,0.998968
-chr1	5030577	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCC,TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=5030644;RU=tccc;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.00122163:1,1:1-1,1-1:0,2,0,0:NULL:NULL:16.7026:366.612,131.36:0.0,0.0:0.157866,0.613891,0.228323	2/2:5:0.0282725:10,10:5-10,5-10:0,0,0,4:NULL:3,1|4,1|7,1|10,1:29.1062:326.675,113.385:2.2931,2.2931:1.0,0.0,0.0
-chr1	5032870	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5032919;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.361478:20,26:20-22,21-26:9,14,0,16:19,2|20,7:4,1|6,2|8,1|11,1|12,1|14,1|15,1|16,1|17,3|21,1|23,2|26,1:304.689:366.612,131.36:0.352008,1.57945:6.5147e-08,1.0,5.81691e-23	0/0:37:0.652812:25,25:23-28,23-28:5,4,0,25:25,5:4,1|6,2|8,1|9,1|10,1|11,2|12,2|13,1|14,1|16,1|17,2|19,1|20,1|21,4|22,2|24,1|25,1:258.187:326.675,113.385:1.7121,1.7121:2.82121e-14,0.0563919,0.943694
-chr1	5034803	.	ACCCACCCACCC	.	.	.	END=5034814;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994095:3,3:3-3,3-3:11,14,0,0:3,11:NULL:173.794:366.612,131.36:0.0,0.0:1.24098e-32,0.00394774,0.996065	0/0:23:0.920083:3,3:3-3,3-3:7,16,0,0:3,7:NULL:173.165:326.675,113.385:0.19802,0.19802:5.54696e-21,0.0536464,0.946438
-chr1	5042658	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=5042677;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.149815:5,5:1-5,1-5:2,12,0,0:5,2:NULL:118.069:366.612,131.36:1.10262,1.10262:4.18241e-07,0.608055,0.392004	0/0:31:0.999979:5,5:5-5,5-5:19,12,0,0:5,19:NULL:191.35:326.675,113.385:0.0,0.0:0.0,2.86153e-05,0.999972
-chr1	5043950	.	GTTTGTTTGTTTGTTT	.	.	.	END=5043965;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:4,4:4-4,4-4:20,7,0,0:4,20:NULL:141.455:366.612,131.36:0.0,0.0:0.0,8.42021e-06,0.999994	0/0:45:1.00001:4,4:3-4,3-4:22,19,0,3:4,22:2,1|3,2:284.906:326.675,113.385:0.21692,0.21692:0.0,1.11147e-06,1.0
-chr1	5046122	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5046183;RU=ct;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0180503:26,26:26-28,26-28:0,5,0,0:NULL:NULL:44.9841:366.612,131.36:1.02378,1.02378:0.807671,0.182256,0.0101442	0/0:22:0.029794:31,31:28-34,28-34:0,11,0,9:NULL:7,1|10,1|12,1|15,2|20,2|25,1|31,1:172.568:326.675,113.385:1.12192,1.12192:1.72614e-08,0.478179,0.521908
-chr1	5046685	.	GTGGTGGTGGTG	GTGGTGGTGGTGGTG	.	.	END=5046696;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:0.830985:4,5:4-4,4-5:16,40,0,0:4,13|5,3:NULL:431.746:366.612,131.36:0.0,0.489073:2.65866e-29,4.68503e-05,0.999956	0/0:63:1.0:4,4:4-4,4-4:30,32,0,0:4,30:NULL:418.869:326.675,113.385:0.0990099,0.0990099:0.0,1.7048e-08,1.0
-chr1	5047709	.	TATATATATATATA	.	.	.	END=5047722;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997365:7,7:7-7,7-7:12,12,0,0:7,12:NULL:161.03:366.612,131.36:0.0,0.0:7.77904e-19,0.00182557,0.998178	0/0:15:0.984738:7,7:7-9,7-9:10,4,0,0:7,10:NULL:74.9247:326.675,113.385:0.922441,0.922441:4.13136e-16,0.0068031,0.993212
-chr1	5055484	.	TGCTGCTGCTGC	.	.	.	END=5055495;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999749:4,4:4-4,4-4:15,8,0,0:4,15:NULL:135.046:366.612,131.36:0.0,0.0:1.3e-44,0.00018649,0.999818	0/0:29:0.999993:4,4:4-4,4-4:19,10,0,0:4,19:NULL:162.768:326.675,113.385:0.0,0.0:0.0,1.46827e-05,0.999986
-chr1	5064770	.	GGCTGGCTGGCT	.	.	.	END=5064781;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.997253:3,3:3-3,3-3:11,9,0,3:3,11:2,2|3,1:146.383:366.612,131.36:0.0,0.0:2.5e-44,0.000676736,0.999325	0/0:31:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:194.449:326.675,113.385:0.0,0.0:0.0,4.37869e-05,0.999957
-chr1	5066467	.	TTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCT	TTTCCTTTTCCT	.	.	END=5066502;RU=tttcct;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0731375:2,2:1-2,1-2:0,13,0,0:NULL:NULL:123.218:366.612,131.36:0.486863,0.486863:0.646631,0.326493,0.0269461	0/0:46:1.0:6,6:6-6,6-6:24,16,0,6:6,24:2,1|3,1|4,2|5,2:288.471:326.675,113.385:0.0,0.0:0.0,3.17017e-07,1.0
-chr1	5068662	.	CTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5068679;RU=ct;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.370893:17,18:15-19,15-19:2,17,0,2:17,2:17,1|18,1:185.617:366.612,131.36:1.48337,1.16983:0.0,0.0,1.0	0/0:18:0.94179:9,9:9-9,9-9:7,9,0,2:9,7:7,1|8,1:124.687:326.675,113.385:0.0,0.0:1.14451e-16,0.0254612,0.974589
-chr1	5071017	.	ATTTATTTATTT	.	.	.	END=5071028;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.192677:3,3:1-3,1-3:2,17,0,0:3,2:NULL:160.902:366.612,131.36:0.877453,0.877453:4.0823e-06,0.603197,0.396863	0/0:27:0.999334:3,3:3-3,3-3:14,13,0,0:3,14:NULL:171.023:326.675,113.385:0.0,0.0:1.43838e-40,0.000438231,0.999567
-chr1	5073289	.	CTTCCTTCCTTC	CTTCCTTC	.	.	END=5073300;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0309734:2,2:1-5,1-5:0,11,0,0:NULL:NULL:99.0037:366.612,131.36:0.808615,0.808615:0.0839852,0.432101,0.484103	0/0:27:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:146.637:326.675,113.385:0.0,0.0:0.0,2.01791e-05,0.99998
-chr1	5073332	.	CCCTCTCCCTCTCCCTCTCCCTCT	CCCTCT	.	.	END=5073355;RU=ccctct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0763815:1,1:1-2,1-2:0,14,0,0:NULL:NULL:124.041:366.612,131.36:0.44763,0.44763:0.389388,0.484308,0.126391	1/1:6:0.0145428:1,1:1-1,1-1:0,6,0,0:NULL:NULL:50.552:326.675,113.385:0.0,0.0:0.106345,0.511468,0.38237
-chr1	5074855	.	AAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=5074870;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.991707:6,6:6-6,6-6:11,7,0,0:6,11:NULL:109.741:366.612,131.36:0.0,0.0:0.0,0.00239985,0.997608	0/0:24:0.999781:4,4:4-4,4-4:15,6,0,3:4,15:3,3:138.025:326.675,113.385:0.0,0.0:0.0,8.98934e-05,0.999911
-chr1	5075461	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5075502;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.301404:23,23:19-23,19-23:3,15,0,2:23,3:4,1|11,1:166.597:366.612,131.36:1.03975,1.03975:1.26872e-07,0.221528,0.778513	0/2:36:0.334589:21,42:21-21,21-42:16,14,0,6:20,4|21,12:8,1|13,1|14,1|19,1|20,1|42,1:275.005:326.675,113.385:0.0,10.4015:2.64187e-15,0.000464744,0.999538
-chr1	5076742	.	AAACAAAACAAAACA	.	.	.	END=5076756;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.999445:3,3:3-3,3-3:14,1,0,0:3,14:NULL:64.0851:366.612,131.36:0.0,0.0:1e-45,0.000246601,0.999757	0/0:27:0.976225:3,3:3-3,3-3:9,18,0,0:3,9:NULL:209.489:326.675,113.385:0.0,0.0:4.81057e-29,0.0183779,0.981659
-chr1	5083412	.	GGGCCGGGCCGGGCCGGGCC	.	.	.	END=5083431;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,16,0,6:4,28:2,2|3,4:304.674:366.612,131.36:0.0,0.0:0.0,1.98004e-08,1.0	0/0:33:0.998278:4,4:4-4,4-4:13,18,0,2:4,13:3,2:232.973:326.675,113.385:0.0,0.0:3.013e-42,0.0013592,0.998647
-chr1	5084805	.	ATGTATGTATGT	.	.	.	END=5084816;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:22,20,0,4:3,22:2,4:302.177:366.612,131.36:0.0,0.0:0.0,4.10807e-07,1.0	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.527:326.675,113.385:0.0,0.0:0.0,2.36315e-06,1.0
-chr1	5087801	.	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	.	.	END=5087900;RU=ctttc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.423483:17,17:14-17,14-17:3,25,0,17:17,3:3,1|5,2|6,1|7,3|9,2|10,2|11,1|12,1|14,2|15,1|16,1:371.198:366.612,131.36:0.712734,0.712734:0.949726,0.0503559,3.15541e-13	0/0:44:0.224341:20,20:18-20,18-20:2,15,0,27:20,2:3,3|4,2|5,2|6,1|7,1|8,1|9,2|10,3|11,1|12,5|16,1|17,2|18,3:341.413:326.675,113.385:1.01397,1.01397:6.01713e-05,0.632259,0.367732
-chr1	5087905	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	END=5087943;RU=tgt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.8976:12,12:11-12,11-12:7,13,0,0:12,7:NULL:150.871:366.612,131.36:0.419363,0.419363:0.970468,0.0295872,7.15236e-11	0/0:35:0.999969:13,13:13-13,13-13:18,5,0,11:13,18:4,2|5,1|6,3|8,1|9,1|10,2|12,1:207.319:326.675,113.385:0.0,0.0:2.99767e-37,2.41469e-05,0.999978
-chr1	5089647	.	TTTATTTTATTTTAT	.	.	.	END=5089661;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.973746:3,3:3-3,3-3:9,16,0,0:3,9:NULL:185.953:366.612,131.36:0.19802,0.19802:6.29408e-30,0.0208076,0.979234	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:169.797:326.675,113.385:0.0,0.0:0.0,3.75043e-06,1.0
-chr1	5093894	.	ATTTTATTTTATTTT	.	.	.	END=5093908;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999851:3,3:3-3,3-3:16,7,0,0:3,16:NULL:127.757:366.612,131.36:0.0,0.0:9.1e-44,8.21706e-05,0.999918	0/0:33:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:210.294:326.675,113.385:0.0,0.0:0.0,2.23212e-05,0.999979
-chr1	5094712	.	ATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT	.	.	END=5094743;RU=at;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.17472:19,19:19-22,19-22:2,13,0,0:19,2:NULL:127.165:366.612,131.36:1.09834,1.09834:0.0,0.0,1.0	0/0:24:0.957031:16,16:13-16,13-16:10,12,0,0:16,10:NULL:155.669:326.675,113.385:1.06729,1.06729:4.33584e-11,0.0290692,0.970985
-chr1	5094744	.	ACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=5094759;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:29:0.998935:8,13:8-12,11-13:9,16,0,3:8,3|11,2|13,4:7,1|8,1|12,1:217.207:366.612,131.36:1.52861,0.57834:9.98027e-36,3.49991e-05,0.999964	0/0:30:0.998945:8,8:8-8,8-8:14,12,0,3:8,14:6,2|7,1:191.816:326.675,113.385:0.139319,0.139319:1.03682e-19,0.000471918,0.99953
-chr1	5094790	.	ACACACACACACAC	ACACACACACACACAC	.	.	END=5094803;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999827:8,8:8-9,8-9:17,13,0,0:8,17:NULL:188.976:366.612,131.36:0.21692,0.21692:0.0,8.64003e-05,0.999917	0/0:29:0.999462:7,7:7-7,7-7:14,11,0,4:7,14:6,1|7,3:189.759:326.675,113.385:0.0,0.0:0.0,4.86949e-05,0.999955
-chr1	5097446	.	TTTATTTATTTA	.	.	.	END=5097457;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999863:3,3:3-3,3-3:15,27,0,2:3,15:2,2:320.643:366.612,131.36:0.0,0.0:0.0,9.35685e-05,0.99991	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:155.907:326.675,113.385:0.0,0.0:0.0,4.98331e-06,0.999995
-chr1	5102138	.	ATTTTATTTTATTTTATTTT	.	.	.	END=5102157;RU=atttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999837:4,4:4-4,4-4:16,11,0,0:4,16:NULL:162.302:366.612,131.36:0.0,0.0:0.0,0.000129928,0.999872	0/0:25:0.995369:4,4:4-4,4-4:11,12,0,2:4,11:3,2:170.556:326.675,113.385:0.0,0.0:2.25603e-36,0.00291734,0.997088
-chr1	5106170	.	ATTTATTTATTT	.	.	.	END=5106181;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.993565:3,3:3-3,3-3:11,8,0,0:3,11:NULL:117.455:366.612,131.36:0.0,0.0:1.93051e-36,0.00365293,0.996354	0/0:34:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:207.406:326.675,113.385:0.0,0.0:0.0,1.2672e-05,0.999987
-chr1	5119029	.	TGTATGTATGTA	TGTATGTATGTATGTA	.	.	END=5119040;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0766832:4,4:1-4,1-4:0,20,0,2:NULL:2,2:194.997:366.612,131.36:0.648798,0.648798:0.129674,0.484023,0.38649	0/0:38:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:232.028:326.675,113.385:0.0,0.0:0.0,3.10227e-06,1.0
-chr1	5120108	.	TTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=5120132;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.999993:6,6:6-6,6-6:19,2,0,0:6,19:NULL:97.5754:366.612,131.36:0.0,0.0:0.0,8.88581e-06,0.999994	0/0:29:0.999999:5,5:5-5,5-5:18,8,0,3:5,18:4,3:172.739:326.675,113.385:0.0,0.0:0.0,7.62036e-06,0.999994
-chr1	5122238	.	ATTTTATTTTATTTT	.	.	.	END=5122252;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999732:3,3:3-3,3-3:15,14,0,0:3,15:NULL:187.866:366.612,131.36:0.0,0.0:0.0,0.000213579,0.999788	0/0:31:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:182.449:326.675,113.385:0.0,0.0:0.0,7.64385e-06,0.999994
-chr1	5124506	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT	.	.	END=5124523;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.611604:11,11:10-11,10-11:15,17,0,3:10,3|11,12:5,1|7,1|11,1:250.286:366.612,131.36:0.465241,0.465241:0.0,0.000149354,0.99985	0/0:43:0.999951:9,9:9-9,9-9:17,17,0,8:9,17:5,2|6,1|7,1|8,4:292.165:326.675,113.385:0.139319,0.139319:5.24719e-27,2.88864e-05,0.999972
-chr1	5130293	.	TTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=5130313;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.978104:8,8:8-8,8-8:9,14,0,5:8,9:3,1|5,1|6,1|7,2:202.051:366.612,131.36:0.0,0.0:1.93e-43,0.00381364,0.996195	0/0:32:0.99936:7,7:6-7,6-7:14,11,0,6:7,14:3,2|4,2|5,2:199.703:326.675,113.385:0.195027,0.195027:4.93393e-32,0.000344328,0.999659
-chr1	5131927	.	TTTATTTATTTATTTATTTATTTA	TTTATTTATTTATTTATTTATTTATTTA	.	.	END=5131950;RU=ttta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999788:7,7:7-7,7-7:15,14,0,6:7,15:3,2|5,2|6,2:231.075:366.612,131.36:0.0,0.0:0.0,4.31738e-05,0.999957	0/0:36:1.0:6,6:6-6,6-6:23,8,0,4:6,23:3,3|5,1:195.315:326.675,113.385:0.0,0.0:0.0,5.79974e-07,1.0
-chr1	5136692	.	TAATTAATTAATTAAT	.	.	.	END=5136707;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.998591:4,4:4-4,4-4:14,24,0,0:4,14:NULL:285.967:366.612,131.36:0.0,0.0:1.12765e-38,0.0011807,0.998823	0/0:39:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:241.36:326.675,113.385:0.0,0.0:0.0,4.79915e-06,0.999995
-chr1	5136778	.	TTTGTTTGTTTGTTTG	.	.	.	END=5136793;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.893922:4,4:4-4,4-4:6,20,0,4:4,6:2,1|3,3:240.676:366.612,131.36:0.0990099,0.0990099:8.65602e-21,0.0682427,0.931854	0/0:44:1.0:4,4:3-4,3-4:23,16,0,4:4,23:3,4:265.691:326.675,113.385:0.169767,0.169767:0.0,3.97615e-07,1.0
-chr1	5137285	.	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAA	.	.	.	END=5137324;RU=aacaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.984495:8,8:8-8,8-8:11,22,0,5:8,11:3,1|5,3|6,1:288.126:366.612,131.36:0.29703,0.29703:2.79445e-37,0.0136302,0.9864	0/0:49:0.999985:8,8:7-8,7-8:18,19,0,11:8,18:3,2|4,1|5,3|6,2|7,3:330.796:326.675,113.385:0.311527,0.311527:0.0,2.48916e-05,0.999978
-chr1	5138729	.	AAATAAATAAAT	.	.	.	END=5138740;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999729:3,3:3-3,3-3:15,14,0,3:3,15:2,3:203.069:366.612,131.36:0.0,0.0:0.0,0.00013237,0.999871	0/0:26:0.999945:3,3:3-3,3-3:17,7,0,2:3,17:2,2:140.376:326.675,113.385:0.0,0.0:0.0,2.30953e-05,0.999979
-chr1	5139656	.	CACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5139691;RU=ca;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:27:0.833584:22,23:21-23,21-23:5,7,0,14:22,3|23,2:5,2|6,1|7,2|8,1|12,1|15,1|17,2|19,2|20,1|23,1:203.602:366.612,131.36:0.505823,0.613702:0.0,0.0,1.0	0/0:33:0.408681:18,18:17-19,17-19:15,9,0,8:17,2|18,10|19,3:8,1|9,1|10,1|12,3|14,1|17,1:223.782:326.675,113.385:0.646679,0.646679:6.46431e-13,0.00452802,0.995484
-chr1	5144394	.	TAAATAAATAAA	.	.	.	END=5144405;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99998:3,3:3-3,3-3:19,8,0,0:3,19:NULL:149.522:366.612,131.36:0.0,0.0:0.0,1.52514e-05,0.999986	0/0:36:1.0:3,3:3-3,3-3:25,9,0,2:3,25:2,2:191.591:326.675,113.385:0.0,0.0:0.0,1.22971e-07,1.0
-chr1	5144427	.	AAAAGAAAAGAAAAG	.	.	.	END=5144441;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.113:366.612,131.36:0.0,0.0:0.0,1.0044e-05,0.999993	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:164.921:326.675,113.385:0.0,0.0:0.0,7.35247e-07,1.0
-chr1	5146387	.	CTCTCTCTCTCTCT	.	.	.	END=5146400;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.919069:7,7:7-7,7-7:7,13,0,0:7,7:NULL:143.578:366.612,131.36:0.0,0.0:5.6896e-14,0.0473101,0.952768	0/0:21:0.966795:7,7:7-7,7-7:9,12,0,0:7,9:NULL:144.35:326.675,113.385:0.29703,0.29703:2.06253e-17,0.0224026,0.977639
-chr1	5151445	.	TTGTTGTTGTTG	.	.	.	END=5151456;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:25,16,0,0:4,25:NULL:244.901:366.612,131.36:0.0,0.0:0.0,3.24408e-07,1.0	0/0:37:0.999896:4,4:4-4,4-4:16,17,0,4:4,16:3,4:250.819:326.675,113.385:0.0,0.0:0.0,7.1918e-05,0.999932
-chr1	5152296	.	AAGTCAAGTCAAGTC	.	.	.	END=5152310;RU=aagtc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999903:3,3:3-3,3-3:17,21,0,0:3,17:NULL:265.343:366.612,131.36:0.0,0.0:0.0,9.4407e-05,0.999909	0/0:34:1.0:3,3:3-3,3-3:25,7,0,2:3,25:2,2:180.137:326.675,113.385:0.0,0.0:0.0,1.04653e-07,1.0
-chr1	5155085	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=5155102;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999279:6,6:5-6,5-6:26,17,0,3:5,2|6,24:5,3:300.68:366.612,131.36:0.298675,0.298675:0.0,0.000723085,0.999279	0/1:28:0.300237:6,7:6-6,6-8:15,10,0,3:6,15:5,2|7,1:186.515:326.675,113.385:0.0,0.859278:0.0,3.67236e-08,1.0
-chr1	5162575	.	TCCCCCTCCCCCTCCCCC	.	.	.	END=5162592;RU=tccccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:237.625:366.612,131.36:0.0,0.0:0.0,7.16308e-06,0.999994	0/0:25:0.99991:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.329:326.675,113.385:0.0,0.0:0.0,5.99108e-05,0.999941
-chr1	5163622	.	TCTCTCTCTCTCTCTC	TCTCTCTCTCTCTC	.	.	END=5163637;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.901722:7,7:5-7,5-7:21,18,0,0:5,2|6,2|7,17:NULL:276.157:366.612,131.36:0.847446,0.847446:1.0,2.2429e-06,1.38999e-28	0/0:35:0.988585:8,8:8-9,8-9:23,10,0,2:8,21|9,2:4,1|7,1:212.43:326.675,113.385:0.425627,0.425627:0.0,8.37333e-07,1.0
-chr1	5164581	.	TGTTTTGTTTTGTTT	.	.	.	END=5164595;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.995517:3,3:3-3,3-3:12,15,0,0:3,12:NULL:184.023:366.612,131.36:0.0,0.0:7.00488e-37,0.0035241,0.996483	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:213.3:326.675,113.385:0.0,0.0:0.0,7.12203e-08,1.0
-chr1	5170810	.	CCACCACCACCA	.	.	.	END=5170821;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:226.062:366.612,131.36:0.0,0.0:0.0,2.6812e-07,1.0	0/0:49:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:326.038:326.675,113.385:0.0,0.0:0.0,7.19001e-07,1.0
-chr1	5173050	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=5173067;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999862:6,6:6-6,6-6:16,15,0,5:6,16:3,1|4,2|5,2:240.565:366.612,131.36:0.0,0.0:0.0,6.14837e-05,0.999941	0/0:26:0.999982:6,6:6-6,6-6:18,8,0,0:6,18:NULL:144.716:326.675,113.385:0.0,0.0:0.0,2.45148e-05,0.999978
-chr1	5173130	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=5173165;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.986903:11,11:4-11,4-11:10,12,0,7:11,10:4,1|5,1|6,1|7,2|10,2:217.158:366.612,131.36:3.47918,3.47918:4.22e-43,0.00497608,0.995039	0/0:22:0.995345:9,9:8-9,8-9:11,7,0,3:9,11:4,1|8,2:133.298:326.675,113.385:0.298675,0.298675:2.13587e-23,0.0021916,0.997814
-chr1	5181851	.	TAAATAAATAAA	.	.	.	END=5181862;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.998314:3,3:3-4,3-4:13,21,0,0:3,13:NULL:237.575:366.612,131.36:0.442564,0.442564:7.37232e-40,0.00129224,0.99871	0/0:22:0.999774:3,3:3-3,3-3:15,5,0,2:3,15:2,2:116.435:326.675,113.385:0.0,0.0:0.0,8.72359e-05,0.999917
-chr1	5195638	.	GGGTGGGTGGGT	.	.	.	END=5195649;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.976028:3,3:3-3,3-3:9,19,0,0:3,9:NULL:204.429:366.612,131.36:0.0990099,0.0990099:2.21323e-26,0.0157165,0.984315	0/0:28:0.988988:3,3:3-3,3-3:10,18,0,0:3,10:NULL:206.144:326.675,113.385:0.0,0.0:1.91723e-29,0.00707587,0.992941
-chr1	5199281	.	AACAACAACAACAACAACAAC	AAC	.	.	END=5199301;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:44:1.00001:7,7:7-7,7-7:22,18,0,4:7,22:3,1|4,1|5,1|6,1:283.57:326.675,113.385:0.0,0.0:0.0,1.18639e-06,1.0
-chr1	5199415	.	TCAATTCAATTCAAT	TCAAT	.	.	END=5199429;RU=tcaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:173.551:326.675,113.385:0.0,0.0:0.0,7.79094e-07,1.0
-chr1	5203454	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5203499;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:19:0.616492:27,27:27-28,27-28:5,10,0,3:27,5:12,1|16,1|20,1:142.65:366.612,131.36:0.475866,0.475866:0.0,0.0,1.0	0/1:53:0.990147:23,24:8-23,8-24:16,16,0,20:21,2|22,3|23,9|24,2:4,3|6,3|7,1|8,2|9,2|11,1|13,1|15,2|16,1|19,1|20,2|24,1:398.603:326.675,113.385:6.28355,6.4573:3.53341e-14,0.00125951,0.998746
-chr1	5204415	.	AAAACAAAACAAAAC	.	.	.	END=5204429;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,22,0,0:3,24:NULL:289.691:366.612,131.36:0.0,0.0:0.0,6.84593e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:207.813:326.675,113.385:0.0,0.0:0.0,1.32214e-06,1.0
-chr1	5206150	.	TATTATTATTAT	.	.	.	END=5206161;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:24,19,0,2:4,24:3,2:280.676:366.612,131.36:0.0,0.0:0.0,4.49774e-07,1.0	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:179.209:326.675,113.385:0.0,0.0:0.0,5.83942e-06,0.999995
-chr1	5209488	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=5209507;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:5,5:5-5,5-5:24,25,0,3:5,24:4,1|5,2:342.299:366.612,131.36:0.0,0.0:0.0,2.93501e-07,1.0	0/0:50:1.0:5,5:5-5,5-5:29,17,0,4:5,29:2,2|3,1|4,1:305.847:326.675,113.385:0.0,0.0:0.0,1.4108e-08,1.0
-chr1	5212542	.	AATAAATAAATA	.	.	.	END=5212553;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:29,21,0,0:3,29:NULL:302.188:366.612,131.36:0.0,0.0:0.0,6.61937e-09,1.0	0/0:30:0.999534:3,3:3-3,3-3:14,16,0,0:3,14:NULL:200.165:326.675,113.385:0.0,0.0:5e-44,0.000297945,0.999705
-chr1	5214463	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5214514;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.179791:38,38:22-39,22-39:2,16,0,22:38,2:7,2|8,1|10,1|12,1|13,1|19,1|20,1|21,1|22,3|24,2|25,1|27,1|28,1|29,1|30,1|33,1|35,1|37,1:332.766:366.612,131.36:8.03867,8.03867:0.0,0.00525894,0.994754	0/0:55:0.816593:26,26:22-26,22-26:8,24,0,22:25,2|26,6:5,2|6,1|8,1|10,2|12,2|14,2|15,1|16,1|17,2|20,1|21,3|22,1|23,1|24,1|26,1:439.895:326.675,113.385:1.52231,1.52231:7.61869e-14,0.109333,0.890764
-chr1	5214858	.	ACAAACAAACAAACAAACAAACAA	ACAAACAAACAAACAAACAAACAAACAA	.	.	END=5214881;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999981:7,7:7-7,7-7:18,16,0,6:7,18:4,1|5,1|6,4:263.817:366.612,131.36:0.0,0.0:0.0,1.96046e-06,1.0	0/0:44:1.0:6,6:6-6,6-6:32,6,0,6:6,32:3,1|4,2|5,3:227.028:326.675,113.385:0.0,0.0:0.0,7.81639e-10,1.0
-chr1	5215016	.	AAACAAACAAACAAAC	.	.	.	END=5215031;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999931:4,4:4-4,4-4:17,22,0,3:4,17:3,3:296.386:366.612,131.36:0.0,0.0:0.0,6.34682e-05,0.99994	0/0:34:0.999896:4,4:4-4,4-4:16,14,0,4:4,16:3,4:222.896:326.675,113.385:0.0,0.0:0.0,5.2001e-05,0.999949
-chr1	5215414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=5215441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.0337407:6,6:6-8,6-8:0,4,0,0:NULL:NULL:33.8497:366.612,131.36:0.950082,0.950082:0.12587,0.46186,0.412459	0/0:36:0.999947:7,7:6-7,6-7:17,11,0,7:7,17:3,1|5,2|6,4:222.254:326.675,113.385:0.35561,0.35561:0.0,2.25514e-05,0.999979
-chr1	5215633	.	GTTTTTTTGTTTTTTTGTTTTTTT	GTTTTTTT	.	.	END=5215656;RU=gttttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0699749:1,1:1-1,1-1:0,8,0,0:NULL:NULL:71.2298:366.612,131.36:0.0,0.0:0.161111,0.542501,0.296497	0/0:19:0.929627:3,3:3-3,3-3:7,12,0,0:3,7:NULL:137.474:326.675,113.385:0.0,0.0:4.70423e-20,0.051824,0.948258
-chr1	5222650	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5222685;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:37:0.999975:14,18:14-15,15-25:15,18,0,3:14,8|15,2|18,5:8,1|10,1|13,1:265.085:366.612,131.36:1.09602,1.47222:1.35483e-06,1.0,1.7173e-11	0/0:31:0.591313:18,18:7-20,7-20:12,7,0,8:17,3|18,9:5,1|7,2|9,1|11,1|12,1|13,2:186.063:326.675,113.385:3.56991,3.56991:4.53689e-11,0.404719,0.595353
-chr1	5222686	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5222719;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0157724:29,29:15-32,15-32:0,16,0,9:NULL:8,1|9,2|11,1|12,2|15,1|25,1|28,1:217.563:366.612,131.36:7.10125,7.10125:1.02035e-15,0.221213,0.778826	0/0:26:0.988323:17,17:12-17,12-17:10,9,0,6:17,10:6,3|12,1|16,1|17,1:168.324:326.675,113.385:2.15787,2.15787:1.15349e-24,0.00401421,0.995997
-chr1	5223713	.	TTTGTTTGTTTG	.	.	.	END=5223724;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:25,19,0,2:3,25:2,2:291.821:366.612,131.36:0.0,0.0:0.0,7.77745e-08,1.0	0/0:34:0.999719:3,3:3-3,3-3:15,19,0,0:3,15:NULL:235.265:326.675,113.385:0.0,0.0:6e-45,0.000233093,0.999767
-chr1	5224486	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	END=5224521;RU=ttcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.737032:15,15:4-15,4-15:6,15,0,8:15,6:2,1|5,1|8,1|10,1|13,1|14,3:230.197:366.612,131.36:3.75682,3.75682:0.0,0.0851395,0.914956	0/0:25:0.999249:9,9:8-9,8-9:14,10,0,0:9,14:NULL:153.745:326.675,113.385:0.270063,0.270063:5.5024e-40,0.000564618,0.999438
-chr1	5225503	.	TTTATTTATTTATTTATTTA	.	.	.	END=5225522;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.00001:5,5:5-5,5-5:22,25,0,5:5,22:2,2|3,2|4,1:355.417:366.612,131.36:0.0,0.0:0.0,2.06382e-06,1.0	0/0:41:0.999991:5,5:5-5,5-5:18,15,0,8:5,18:2,1|3,3|4,4:267.129:326.675,113.385:0.0,0.0:0.0,1.16671e-05,0.999987
-chr1	5225865	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5225896;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:80:0.347947:22,29:21-22,21-29:15,34,0,28:21,6|22,9:5,2|6,1|8,1|9,1|10,1|11,1|12,1|13,2|14,4|15,1|16,3|17,3|18,1|19,1|21,4|29,1:621.824:366.612,131.36:0.236383,3.71225:0.0,0.0,1.0	0/0:31:0.378564:16,16:13-16,13-16:8,12,0,9:15,3|16,5:5,1|7,1|8,1|9,1|11,1|12,3|16,1:226.415:326.675,113.385:0.967363,0.967363:9.83265e-13,0.604702,0.395359
-chr1	5228543	.	TTTATTTATTTA	.	.	.	END=5228554;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:28,12,0,4:3,28:2,3|3,1:251.392:366.612,131.36:0.0,0.0:0.0,7.3749e-09,1.0	0/0:32:0.999984:3,3:3-3,3-3:18,14,0,0:3,18:NULL:201.611:326.675,113.385:0.0,0.0:0.0,2.33616e-05,0.999979
-chr1	5232603	.	TAATAATAATAA	.	.	.	END=5232614;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:4,4:4-4,4-4:23,9,0,0:4,23:NULL:168.543:366.612,131.36:0.0,0.0:0.0,1.06949e-06,1.0	0/0:24:1.0:4,4:4-4,4-4:20,4,0,0:4,20:NULL:116.086:326.675,113.385:0.0,0.0:0.0,5.85088e-06,0.999995
-chr1	5237129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5237166;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.813959:19,19:18-19,18-19:7,10,0,2:19,7:7,1|11,1:145.291:366.612,131.36:0.374147,0.374147:2.06632e-09,0.114796,0.885306	0/0:34:0.996205:19,19:10-19,10-19:17,7,0,8:18,2|19,15:10,1|11,1|14,1|15,1|16,1|17,2|18,1:205.591:326.675,113.385:3.76193,3.76193:5.78756e-18,0.00365141,0.99636
-chr1	5237829	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT,TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5237896;RU=ttct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0416806:19,19:14-21,14-21:0,8,0,8:NULL:4,1|5,1|6,2|12,1|14,1|17,1|18,1:130.054:366.612,131.36:1.80051,1.80051:3.71072e-16,0.376297,0.623757	1/1:37:0.762862:18,18:17-18,17-18:5,14,0,17:18,5:5,2|6,2|8,3|9,1|10,2|11,1|12,1|13,1|15,2|16,1|17,1:276.605:326.675,113.385:0.494455,0.494455:4.1147e-18,0.076631,0.923462
-chr1	5248663	.	ACCACCACCACC	.	.	.	END=5248674;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:4,4:4-4,4-4:40,16,0,0:4,40:NULL:299.265:366.612,131.36:0.0,0.0:0.0,8.09204e-12,1.0	0/0:54:1.0:4,4:4-4,4-4:32,18,0,4:4,32:3,4:326.504:326.675,113.385:0.0,0.0:0.0,7.37035e-10,1.0
-chr1	5256153	.	GAGCAAGAGCAAGAGCAA	.	.	.	END=5256170;RU=gagcaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999993:3,3:3-3,3-3:19,8,0,0:3,19:NULL:143.436:366.612,131.36:0.0,0.0:2.84919e-36,1.28151e-05,0.999987	0/0:48:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:269.734:326.675,113.385:0.0,0.0:0.0,9.40678e-10,1.0
-chr1	5258418	.	CACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5258457;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:64:0.49556:22,24:22-22,8-28:24,16,0,20:21,6|22,18:5,1|10,1|11,1|13,1|14,1|15,1|16,5|17,3|18,1|19,1|20,2|22,1|24,1:437.329:366.612,131.36:0.0,6.46634:0.0,4.22087e-09,1.0	0/0:101:1.0:20,20:20-20,20-20:47,24,0,30:19,7|20,38|21,2:4,1|5,2|6,2|7,1|8,1|9,3|10,2|12,1|14,2|15,2|16,3|17,2|18,1|19,5|20,2:681.747:326.675,113.385:0.0990099,0.0990099:0.0,9.9887e-08,1.0
-chr1	5258712	.	GTTTGTTTGTTTGTTTGTTT	.	.	.	END=5258731;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:5,5:2-5,2-5:32,19,0,7:5,32:2,1|3,2|4,4:353.064:366.612,131.36:0.5093,0.5093:0.0,8.45447e-10,1.0	0/0:51:0.999986:5,5:4-5,4-5:31,17,0,3:4,2|5,29:3,1|4,2:311.605:326.675,113.385:0.298675,0.298675:0.0,1.61664e-05,0.999986
-chr1	5259167	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=5259184;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997238:9,9:8-9,8-9:22,12,0,0:8,3|9,19:NULL:205.731:366.612,131.36:0.253975,0.253975:1.4656e-32,0.00277942,0.99723	0/0:36:0.992784:9,9:8-9,8-9:21,12,0,3:8,3|9,18:5,1|7,1|8,1:222.927:326.675,113.385:0.298675,0.298675:1.90519e-30,0.00723947,0.992776
-chr1	5260536	.	AGAGAGAGAGAG	.	.	.	END=5260547;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:24,15,0,3:6,24:4,1|5,2:257.581:366.612,131.36:0.0,0.0:0.0,3.27837e-07,1.0	0/0:41:1.0:6,6:6-6,6-6:27,11,0,2:6,27:4,1|5,1:221.878:326.675,113.385:0.139319,0.139319:0.0,3.43838e-08,1.0
-chr1	5261841	.	ACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCAC	.	.	.	END=5261894;RU=accctgtgaggggagcac;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.989161:3,3:3-3,3-3:12,25,0,3:3,12:2,3:307.882:366.612,131.36:0.19802,0.19802:1.21564e-13,0.0108002,0.989224	0/0:26:0.457035:3,3:1-3,1-3:8,18,0,0:3,8:NULL:212.032:326.675,113.385:0.982146,0.982146:1.46782e-08,0.542026,0.458084
-chr1	5274498	.	CACACACACACACACACACACACACACACA	.	.	.	END=5274527;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.827913:15,15:12-16,12-16:14,11,0,4:14,3|15,11:5,1|10,1|13,2:198.033:366.612,131.36:1.07834,1.07834:8.4421e-11,0.171242,0.828827	0/0:49:0.999387:15,15:14-15,14-15:20,18,0,9:14,2|15,18:4,2|5,2|10,1|11,1|14,3:327.507:326.675,113.385:0.290354,0.290354:1.052e-19,0.000612737,0.999392
-chr1	5275399	.	CCAACCAACCAACCAA	.	.	.	END=5275414;RU=ccaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.992288:4,4:4-4,4-4:10,26,0,2:4,10:3,2:288.018:366.612,131.36:0.29703,0.29703:1.16967e-32,0.00604591,0.99397	0/0:24:0.999116:4,4:3-4,3-4:14,9,0,0:4,14:NULL:137.796:326.675,113.385:0.412766,0.412766:4e-45,0.000609573,0.999393
-chr1	5277383	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5277428;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.898518:12,21:12-21,20-21:11,10,0,7:12,2|20,4|21,5:5,1|7,1|9,1|10,3|14,1:208.996:366.612,131.36:3.65753,0.35561:1.0,3.34413e-09,4.59526e-18	0/0:31:0.947523:23,23:22-23,22-23:11,11,0,8:22,2|23,9:5,1|7,1|8,1|16,2|17,3:221.047:326.675,113.385:0.335467,0.335467:4.2736e-11,0.0337459,0.966317
-chr1	5287020	.	CTTTCTTTCTTT	.	.	.	END=5287031;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999962:3,3:3-3,3-3:18,16,0,0:3,18:NULL:226.214:366.612,131.36:0.0,0.0:0.0,4.26436e-05,0.999957	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:182.96:326.675,113.385:0.0,0.0:0.0,2.75502e-06,1.0
-chr1	5287167	.	CACTCACTCACT	.	.	.	END=5287178;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.997619:3,3:3-3,3-3:13,17,0,0:3,13:NULL:209.212:366.612,131.36:0.0,0.0:2.217e-42,0.00140441,0.998602	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:222.996:326.675,113.385:0.0,0.0:0.0,9.17748e-07,1.0
-chr1	5292757	.	TATTTATTTATTTATT	.	.	.	END=5292772;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:4,4:4-4,4-4:24,28,0,5:4,24:3,5:381.227:366.612,131.36:0.0,0.0:0.0,2.152e-07,1.0	0/0:45:1.0:4,4:4-4,4-4:31,12,0,2:4,31:2,1|3,1:249.227:326.675,113.385:0.0,0.0:0.0,2.36608e-09,1.0
-chr1	5293618	.	ACCCACCCACCC	.	.	.	END=5293629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.286812:3,3:1-4,1-4:2,5,0,0:3,2:NULL:56.0438:366.612,131.36:0.4771,0.4771:6.95321e-07,0.320178,0.679833	0/0:33:0.997083:3,3:3-3,3-3:11,20,0,2:3,11:2,2:235.353:326.675,113.385:0.0,0.0:1.65754e-32,0.00180725,0.9982
-chr1	5296079	.	TCTCTCTCTCTC	TCTCTCTCTC	.	.	END=5296090;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.999768:5,6:5-6,6-6:23,7,0,0:5,6|6,17:NULL:167.987:366.612,131.36:0.323567,0.0:3.67971e-28,0.999766,0.000235612	0/0:41:1.0:6,6:4-6,4-6:24,16,0,0:6,24:NULL:243.658:326.675,113.385:0.339533,0.339533:0.0,1.01115e-06,1.0
-chr1	5297215	.	TTATTATTATTA	.	.	.	END=5297226;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:68:1.0:4,4:4-4,4-4:30,36,0,2:4,30:3,2:473.448:366.612,131.36:0.0,0.0:0.0,3.80989e-08,1.0	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:285.39:326.675,113.385:0.0,0.0:0.0,6.96663e-09,1.0
-chr1	5301831	.	AAAGAAAGAAAG	.	.	.	END=5301842;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,20,0,0:3,29:NULL:294.546:366.612,131.36:0.0,0.0:0.0,7.70578e-09,1.0	0/0:42:1.00001:3,3:3-3,3-3:22,20,0,0:3,22:NULL:269.307:326.675,113.385:0.0,0.0:0.0,2.30349e-06,1.0
-chr1	5303346	.	TTTGTTTGTTTGTTTG	.	.	.	END=5303361;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.997585:4,4:4-4,4-4:13,20,0,0:4,13:NULL:228.538:366.612,131.36:0.0,0.0:1e-42,0.00188801,0.998117	0/0:31:0.999824:4,4:4-4,4-4:15,10,0,6:4,15:3,6:189.096:326.675,113.385:0.0,0.0:0.0,7.15698e-05,0.999932
-chr1	5303465	.	TAGGTAGGTAGG	.	.	.	END=5303476;RU=tagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:179.066:366.612,131.36:0.0,0.0:0.0,4.32502e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:27,5,0,3:3,27:2,3:170.725:326.675,113.385:0.0,0.0:0.0,1.88107e-08,1.0
-chr1	5304109	.	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	.	.	END=5304158;RU=caaag;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.990926:11,11:11-11,11-11:10,24,0,9:11,10:4,2|5,1|7,1|8,3|9,1|10,1:325.961:366.612,131.36:0.0,0.0:4e-45,0.00453009,0.995484	0/0:34:0.999662:10,10:6-10,6-10:16,13,0,4:10,16:2,1|6,2|9,1:221.236:326.675,113.385:1.8278,1.8278:0.0,0.000306716,0.999697
-chr1	5305886	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5305925;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:54:0.338605:20,37:20-20,19-37:16,21,0,16:19,5|20,11:6,1|8,2|10,3|11,1|12,1|13,2|16,2|17,1|18,1|19,1|36,1:415.777:366.612,131.36:0.0,8.43581:1.53622e-12,0.00330418,0.996707	0/1:53:0.357551:20,24:20-20,10-24:17,18,0,14:19,6|20,11:6,1|7,3|8,2|9,2|13,1|14,1|17,1|18,1|20,1|24,1:379.134:326.675,113.385:0.139319,5.17495:3.42354e-19,0.00235956,0.997647
-chr1	5306965	.	ATCATCATCATC	.	.	.	END=5306976;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:29,9,0,0:4,29:NULL:194.503:366.612,131.36:0.0,0.0:0.0,1.60491e-08,1.0	0/0:50:1.0:4,4:4-4,4-4:29,16,0,5:4,29:3,5:297.402:326.675,113.385:0.0,0.0:0.0,8.0037e-09,1.0
-chr1	5312273	.	TCTCTCTCTCTCTCTC	.	.	.	END=5312288;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.987404:8,8:6-8,6-8:26,9,0,0:6,4|7,2|8,20:NULL:212.78:366.612,131.36:0.850448,0.850448:1.5683e-41,0.0126277,0.987401	0/0:31:0.99995:8,8:8-9,8-9:22,4,0,3:7,2|8,20:5,2|6,1:155.316:326.675,113.385:0.39604,0.39604:4.36e-43,6.0267e-05,0.999941
-chr1	5312289	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5312324;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:43:0.868327:17,18:17-17,17-20:13,14,0,15:16,2|17,9|18,2:5,2|9,1|11,2|12,2|15,4|16,4:320.234:366.612,131.36:0.417958,1.14937:0.120619,0.879405,7.83593e-05	0/0:34:0.981324:18,18:17-19,17-19:15,4,0,14:17,3|18,12:5,2|6,1|7,1|9,2|10,2|11,1|14,2|16,1|17,2:221.142:326.675,113.385:0.393557,0.393557:4.0892e-18,0.016289,0.983747
-chr1	5312324	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5312357;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999867:17,17:17-19,17-19:17,19,0,3:17,17:5,1|8,1|11,1:278.5:366.612,131.36:0.507951,0.507951:3.43283e-35,6.11318e-05,0.999941	0/0:33:0.869753:17,17:16-17,16-17:17,9,0,7:16,3|17,14:4,1|8,3|13,1|16,2:218.032:326.675,113.385:0.419363,0.419363:3.86306e-25,0.13016,0.869937
-chr1	5318871	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=5318898;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.960449:19,19:17-19,17-19:13,14,0,7:18,2|19,11:7,1|9,1|10,2|12,1|13,1|15,1:251.315:366.612,131.36:0.628225,0.628225:0.0,0.0,1.0	0/0:38:0.999671:14,14:14-14,14-14:16,10,0,11:14,16:4,1|5,1|7,1|8,1|9,1|11,2|12,2|13,2:246.933:326.675,113.385:0.0,0.0:1.71366e-21,0.00011102,0.999888
-chr1	5327635	.	CTCTTTCCCTCTTTCCCTCTTTCC	CTCTTTCC	.	.	END=5327658;RU=ctctttcc;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.325739:1,1:1-3,1-3:0,19,0,0:NULL:NULL:172.932:366.612,131.36:0.978146,0.978146:0.565034,0.384922,0.0501882	0/0:25:0.985248:3,3:3-3,3-3:10,15,0,0:3,10:NULL:176.475:326.675,113.385:0.19802,0.19802:5.32981e-25,0.013287,0.986741
-chr1	5333023	.	TATATATATATATATA	TATATATATATATATATATATA	.	.	END=5333038;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.441393:11,11:10-13,10-13:9,9,0,0:10,2|11,7:NULL:122.896:366.612,131.36:1.11059,1.11059:1.78662e-29,0.0036561,0.996353	0/0:8:0.802531:8,8:8-8,8-8:6,2,0,0:8,6:NULL:42.6017:326.675,113.385:0.0,0.0:6.33462e-08,0.0949859,0.905114
-chr1	5334011	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5334042;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.702044:19,20:19-21,19-21:7,12,0,13:19,3|20,4:6,2|7,1|8,4|9,1|12,1|13,2|14,2:248.604:366.612,131.36:0.830386,0.473387:0.0,0.0,1.0	0/0:22:0.991203:16,16:16-16,16-16:14,4,0,4:15,2|16,12:5,1|10,1|13,1|15,1:131.76:326.675,113.385:0.139319,0.139319:1.15746e-14,0.00625518,0.99376
-chr1	5337377	.	TTTATTTATTTA	.	.	.	END=5337388;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:237.645:366.612,131.36:0.0,0.0:0.0,6.40429e-07,1.0	0/0:33:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:202.756:326.675,113.385:0.0,0.0:0.0,2.36752e-05,0.999979
-chr1	5340739	.	TATTTATTTATT	.	.	.	END=5340750;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.707:366.612,131.36:0.0,0.0:0.0,1.97523e-05,0.99998	0/0:16:0.983407:3,3:3-3,3-3:9,5,0,2:3,9:2,2:96.8479:326.675,113.385:0.0,0.0:4.01017e-31,0.00686109,0.993158
-chr1	5341947	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	.	END=5341974;RU=aagg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99808:7,7:7-7,7-7:13,15,0,3:7,13:2,1|4,1|6,1:218.78:366.612,131.36:0.0,0.0:7.99043e-36,0.0014034,0.998602	0/0:27:0.979243:7,7:6-7,6-7:9,15,0,2:7,9:6,2:192.077:326.675,113.385:0.442564,0.442564:5.8151e-25,0.0143806,0.985652
-chr1	5357169	.	GGGTGGGTGGGT	.	.	.	END=5357180;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.608255:3,3:3-3,3-3:4,11,0,0:3,4:NULL:112.0:366.612,131.36:0.19802,0.19802:2.62201e-11,0.214101,0.785943	0/0:33:0.984164:3,3:3-3,3-3:9,24,0,0:3,9:NULL:245.497:326.675,113.385:0.0,0.0:2.5687e-24,0.0106184,0.989403
-chr1	5365050	.	CCTCCCTCCCTC	.	.	.	END=5365061;RU=cctc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:31,22,0,0:3,31:NULL:322.918:366.612,131.36:0.0,0.0:0.0,4.07982e-09,1.0	0/0:38:1.0:3,3:3-3,3-3:27,9,0,2:3,27:2,2:205.87:326.675,113.385:0.0,0.0:0.0,1.47401e-08,1.0
-chr1	5368230	.	CTCTTGCGCTCTTGCGCTCTTGCGCTCTTGCG	CTCTTGCGCTCTTGCGCTCTTGCG	.	.	END=5368261;RU=ctcttgcg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.882176:3,3:3-11,3-11:20,27,0,2:3,20:2,1|11,1:362.233:366.612,131.36:3.12646,3.12646:0.882095,0.118006,0.0	0/0:36:0.999916:4,4:4-4,4-4:16,17,0,3:4,16:3,3:243.009:326.675,113.385:0.0,0.0:0.0,8.91984e-05,0.999911
-chr1	5368294	.	CTTGCACTCTTGCACTCTTGCACT	.	.	.	END=5368317;RU=cttgcact;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.997641:3,3:3-3,3-3:14,25,0,0:3,14:NULL:292.044:366.612,131.36:0.0,0.0:2.19494e-38,0.002326,0.997678	0/0:35:0.999965:3,3:3-3,3-3:18,17,0,0:3,18:NULL:235.837:326.675,113.385:0.0,0.0:0.0,4.25038e-05,0.999957
-chr1	5369349	.	GTTTGTTTGTTT	.	.	.	END=5369360;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:19,13,0,0:3,19:NULL:193.077:366.612,131.36:0.0,0.0:0.0,7.50507e-06,0.999994	0/0:21:0.999752:3,3:3-3,3-3:15,4,0,2:3,15:2,2:112.933:326.675,113.385:0.0,0.0:0.0,8.85613e-05,0.999911
-chr1	5369470	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT	.	.	END=5369505;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:17:0.65517:13,13:13-14,13-14:5,11,0,0:13,5:NULL:125.134:366.612,131.36:0.44763,0.44763:1.0,0.0,0.0	1/1:8:0.0133204:12,12:15-19,15-19:0,5,0,0:NULL:NULL:47.5052:326.675,113.385:1.68323,1.68323:0.354018,0.483083,0.162943
-chr1	5374204	.	TTTGTTTGTTTGTTTG	.	.	.	END=5374219;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999829:4,4:3-4,3-4:16,13,0,0:4,16:NULL:181.117:366.612,131.36:0.390807,0.390807:0.0,0.000140681,0.999864	0/0:21:0.999914:4,4:4-4,4-4:17,4,0,0:4,17:NULL:104.508:326.675,113.385:0.0,0.0:0.0,5.65094e-05,0.999947
-chr1	5380595	.	ACACACACACAC	.	.	.	END=5380606;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.995403:6,6:6-6,6-6:11,12,0,0:6,11:NULL:153.893:366.612,131.36:0.0,0.0:6.47033e-27,0.00291211,0.997095	0/0:36:1.0:6,6:6-6,6-6:23,13,0,0:6,23:NULL:210.926:326.675,113.385:0.0,0.0:0.0,8.84609e-07,1.0
-chr1	5380856	.	TCTGTCTGTCTG	.	.	.	END=5380867;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:33,15,0,0:3,33:NULL:268.978:366.612,131.36:0.0,0.0:0.0,8.82469e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:30,12,0,2:3,30:2,2:243.845:326.675,113.385:0.0,0.0:0.0,3.59975e-09,1.0
-chr1	5380890	.	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5380943;RU=ca;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:55:0.293781:21,25:21-21,21-28:16,16,0,23:20,2|21,14:7,2|8,1|9,2|11,1|12,2|13,1|14,2|16,1|17,1|18,1|19,2|20,4|21,1|23,1|25,1:422.02:366.612,131.36:0.0,1.90161:0.574979,0.425105,0.0	0/0:43:0.937524:27,27:18-27,18-27:8,15,0,18:27,8:7,1|9,1|11,2|12,1|13,1|14,1|17,2|18,1|22,3|23,1|25,3|26,1:317.864:326.675,113.385:4.08564,4.08564:5.81294e-08,0.0327406,0.967321
-chr1	5382870	.	GAGGAAGAGGAAGAGGAA	.	.	.	END=5382887;RU=gaggaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.00001:3,3:3-3,3-3:21,18,0,6:3,21:2,6:284.486:366.612,131.36:0.0,0.0:0.0,1.09993e-06,1.0	0/0:34:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:197.584:326.675,113.385:0.0,0.0:0.0,2.89385e-06,1.0
-chr1	5384698	.	AGAAAGAAAGAAAGAA	.	.	.	END=5384713;RU=agaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.951299:4,4:4-4,4-4:8,1,0,0:4,8:NULL:42.0356:366.612,131.36:0.0,0.0:8.24126e-27,0.0253717,0.974677	0/0:13:0.994208:4,4:3-4,3-4:11,1,0,0:4,11:NULL:52.2596:326.675,113.385:0.452422,0.452422:1.09039e-36,0.00304955,0.996958
-chr1	5384783	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5384850;RU=ga;PERIOD=2;REF=34.0;EXPTHRESH=34	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0170297:37,37:25-38,25-38:0,6,0,7:NULL:5,1|15,1|17,1|18,1|21,1|25,1|37,1:109.943:366.612,131.36:4.88194,4.88194:9.74187e-08,0.688895,0.311118	1/1:10:0.00722649:26,26:24-35,24-35:0,3,0,4:NULL:5,1|8,1|13,1|15,1:59.5948:326.675,113.385:2.9505,2.9505:0.523716,0.401562,0.0748556
-chr1	5384864	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA,AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	END=5384923;RU=agaa;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:24:0.811644:14,14:14-14,14-14:5,12,0,7:14,5:5,1|7,2|10,2|13,1|14,1:181.954:366.612,131.36:0.0,0.0:0.884619,0.115484,8.42783e-10	1/0:18:0.995891:13,15:13-15,15-15:7,6,0,5:13,2|15,5:7,1|9,1|12,2|13,1:128.201:326.675,113.385:0.825531,0.0:1.40358e-11,0.996498,0.00350955
-chr1	5390035	.	CCTCCTCCTCCT	.	.	.	END=5390046;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:30,20,0,0:4,30:NULL:303.92:366.612,131.36:0.0,0.0:0.0,1.00316e-08,1.0	0/0:42:1.0:4,4:3-4,3-4:25,13,0,3:4,25:3,3:233.407:326.675,113.385:0.21692,0.21692:0.0,8.32903e-08,1.0
-chr1	5391563	.	TTTCTTTCTTTC	.	.	.	END=5391574;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:20,19,0,3:3,20:2,3:279.261:366.612,131.36:0.0,0.0:0.0,3.85061e-06,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.858:326.675,113.385:0.0,0.0:0.0,2.44321e-06,1.0
-chr1	5393656	.	TTTATTTATTTA	.	.	.	END=5393667;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:212.9:366.612,131.36:0.0,0.0:0.0,3.37619e-07,1.0	0/0:22:0.99984:3,3:3-3,3-3:16,6,0,0:3,16:NULL:119.896:326.675,113.385:0.0,0.0:0.0,8.31027e-05,0.999918
-chr1	5400536	.	GGGGTGGGGGTGGGGGTG	.	.	.	END=5400553;RU=ggggtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.952146:3,3:2-3,2-3:8,22,0,2:3,8:2,2:250.206:366.612,131.36:0.309,0.309:3.00685e-21,0.0377962,0.962271	0/0:22:0.986756:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.634:326.675,113.385:0.0,0.0:5.56677e-27,0.00952345,0.990499
-chr1	5400652	.	TAAATAAATAAATAAA	.	.	.	END=5400667;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999912:4,4:4-4,4-4:18,18,0,0:4,18:NULL:240.227:366.612,131.36:0.0,0.0:0.0,8.34338e-05,0.999918	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:169.93:326.675,113.385:0.0,0.0:0.0,2.37959e-06,1.0
-chr1	5401591	.	CAAACAAACAAACAAACAAA	.	.	.	END=5401610;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:20,21,0,2:5,20:3,1|4,1:287.227:366.612,131.36:0.0,0.0:0.0,1.04435e-05,0.999993	0/0:34:0.998896:5,5:4-5,4-5:15,18,0,0:5,15:NULL:226.268:326.675,113.385:0.284901,0.284901:5.5e-44,0.00102301,0.998982
-chr1	5407272	.	AATAAATAAATAAATA	.	.	.	END=5407287;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:33,17,0,2:4,33:3,2:299.722:366.612,131.36:0.0,0.0:0.0,6.38711e-10,1.0	0/0:56:1.0:4,4:4-4,4-4:32,20,0,4:4,32:2,2|3,1|4,1:340.155:326.675,113.385:0.0,0.0:0.0,1.50266e-09,1.0
-chr1	5411524	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5411557;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:0.878383:17,17:12-17,12-17:26,17,0,21:16,8|17,18:5,2|7,3|9,2|10,2|12,4|13,4|15,3|16,1:447.231:366.612,131.36:1.11306,1.11306:1.04022e-17,0.121721,0.878381	0/0:56:0.900944:17,17:16-17,16-17:21,16,0,19:16,6|17,15:4,1|5,3|6,1|9,1|10,4|11,1|12,2|13,1|14,2|15,3:398.882:326.675,113.385:0.437216,0.437216:2.70896e-15,0.0991223,0.900982
-chr1	5412318	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=5412335;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.340536:9,9:7-10,7-10:16,7,0,0:7,2|9,12|10,2:NULL:147.298:366.612,131.36:1.18233,1.18233:5.7347e-20,0.61885,0.381204	0/0:22:0.999588:9,9:9-9,9-9:15,5,0,2:9,15:7,2:121.002:326.675,113.385:0.0,0.0:1.725e-24,0.000183454,0.999819
-chr1	5412585	.	GCAGGCAGGCAG	.	.	.	END=5412596;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:29,11,0,2:3,29:2,2:231.295:366.612,131.36:0.0,0.0:0.0,5.35748e-09,1.0	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:141.585:326.675,113.385:0.0,0.0:0.0,5.03885e-06,0.999995
-chr1	5414201	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5414252;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.277101:22,30:21-22,20-32:13,10,0,12:20,3|21,2|22,8:5,1|9,2|10,1|11,1|13,1|14,2|16,1|17,1|21,1|29,1:264.281:366.612,131.36:0.19802,4.38695:0.000455048,0.999546,6.6337e-28	0/0:27:0.799191:26,26:26-26,26-26:6,5,0,16:26,6:4,1|5,2|8,1|11,1|13,1|15,1|16,2|17,1|18,1|20,1|21,1|22,1|25,2:200.894:326.675,113.385:0.0,0.0:2.87718e-07,0.0580028,0.942083
-chr1	5420026	.	ATGTATGTATGT	.	.	.	END=5420037;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:182.254:366.612,131.36:0.0,0.0:0.0,6.34021e-06,0.999994	0/0:20:0.999831:3,3:3-3,3-3:16,4,0,0:3,16:NULL:101.288:326.675,113.385:0.0,0.0:0.0,9.05735e-05,0.999911
-chr1	5421453	.	AGAAAAGAAAAGAAA	.	.	.	END=5421467;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:232.041:366.612,131.36:0.0,0.0:0.0,1.245e-07,1.0	0/0:27:0.99925:3,3:3-3,3-3:14,11,0,2:3,14:2,2:171.015:326.675,113.385:0.0,0.0:1.787e-42,0.000363445,0.999637
-chr1	5421483	.	AACAAACAAACAAACA	.	.	.	END=5421498;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999137:4,4:4-4,4-4:14,12,0,5:4,14:2,2|3,3:205.526:366.612,131.36:0.0,0.0:2.6384e-41,0.000376896,0.999628	0/0:23:0.98592:4,4:4-4,4-4:10,10,0,3:4,10:2,3:155.459:326.675,113.385:0.0,0.0:7.92884e-30,0.00829948,0.991719
-chr1	5421960	.	TTTGTTTGTTTG	.	.	.	END=5421971;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999768:3,3:3-3,3-3:15,7,0,2:3,15:2,2:142.043:366.612,131.36:0.0,0.0:0.0,9.03633e-05,0.999911	0/0:22:0.998824:3,3:2-3,2-3:13,8,0,0:3,13:NULL:131.18:326.675,113.385:0.452422,0.452422:2.207e-42,0.000683346,0.999318
-chr1	5429464	.	GGGTGGGTGGGT	.	.	.	END=5429475;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.947173:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.027:366.612,131.36:0.19802,0.19802:4.74538e-22,0.0328576,0.967201	0/0:35:0.992779:3,3:3-3,3-3:10,25,0,0:3,10:NULL:265.199:326.675,113.385:0.0,0.0:1.95984e-27,0.00480293,0.995206
-chr1	5439295	.	AAATAAATAAAT	.	.	.	END=5439306;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,15,0,2:3,37:2,2:300.503:366.612,131.36:0.0,0.0:0.0,4.26324e-11,1.0	0/0:34:0.999972:3,3:3-3,3-3:17,14,0,3:3,17:2,3:218.014:326.675,113.385:0.0,0.0:0.0,1.9811e-05,0.99998
-chr1	5439862	.	AAAAACAAAAACAAAAAC	.	.	.	END=5439879;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:37,18,0,0:3,37:NULL:309.002:366.612,131.36:0.0,0.0:0.0,7.11533e-11,1.0	0/0:42:1.0:3,3:3-3,3-3:28,12,0,2:3,28:2,2:231.902:326.675,113.385:0.0,0.0:0.0,2.05311e-08,1.0
-chr1	5439880	.	CAAGCAAGCAAG	.	.	.	END=5439891;RU=caag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:316.843:366.612,131.36:0.0,0.0:0.0,1.11968e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:28,14,0,2:3,28:2,2:247.995:326.675,113.385:0.0,0.0:0.0,1.62076e-08,1.0
-chr1	5440024	.	AAAACAAAACAAAAC	.	.	.	END=5440038;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,14,0,2:3,30:2,2:270.182:366.612,131.36:0.0,0.0:0.0,1.14812e-08,1.0	0/0:36:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:183.432:326.675,113.385:0.0,0.0:0.0,2.03527e-08,1.0
-chr1	5448684	.	GTGGTGGTGGTG	.	.	.	END=5448695;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:20,13,0,2:4,20:3,2:202.444:366.612,131.36:0.0,0.0:0.0,3.08094e-06,1.0	0/0:27:0.999992:4,4:4-4,4-4:19,8,0,0:4,19:NULL:144.751:326.675,113.385:0.0,0.0:0.0,1.63653e-05,0.999986
-chr1	5448817	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5448840;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.99861:6,6:6-6,6-6:13,8,0,3:6,13:3,1|4,2:144.918:366.612,131.36:0.0,0.0:1.36302e-38,0.000751979,0.999249	0/0:27:0.982701:6,6:6-6,6-6:9,13,0,5:6,9:2,1|4,2|5,2:191.308:326.675,113.385:0.0,0.0:8.67818e-27,0.0079832,0.992034
-chr1	5448857	.	AAACAAAACAAAACA	.	.	.	END=5448871;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.984248:3,3:3-3,3-3:9,8,0,0:3,9:NULL:107.217:366.612,131.36:0.0,0.0:1.10938e-30,0.00908823,0.990933	0/0:21:0.937648:3,3:3-3,3-3:8,13,0,0:3,8:NULL:154.225:326.675,113.385:0.220506,0.220506:1.31029e-26,0.0483356,0.95174
-chr1	5449710	.	TTTCTTTCTTTC	.	.	.	END=5449721;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:243.822:366.612,131.36:0.0,0.0:0.0,1.68455e-07,1.0	0/0:47:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:251.345:326.675,113.385:0.0,0.0:0.0,3.88499e-10,1.0
-chr1	5450202	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5450241;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.998109:25,25:25-27,25-27:14,20,0,18:25,14:5,3|6,3|7,2|9,1|11,1|14,1|15,1|17,2|18,2|22,1|25,1:392.37:366.612,131.36:0.480581,0.480581:0.0,0.0,1.0	0/0:73:0.91676:20,20:19-20,19-20:20,22,0,30:18,2|19,4|20,14:6,1|7,2|8,2|9,4|10,2|11,3|13,4|14,1|15,2|17,2|18,3|19,4:532.856:326.675,113.385:0.391308,0.391308:2.08895e-13,0.0831682,0.916927
-chr1	5457139	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5457182;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.986189:19,20:16-21,19-21:11,21,0,10:19,6|20,5:8,1|14,2|15,2|16,1|17,1|18,1|19,2:333.91:366.612,131.36:0.831565,0.667418:0.999903,9.76201e-05,1.34211e-13	0/3:41:0.947557:22,23:22-22,21-23:22,8,0,11:20,2|21,5|22,15:5,1|6,1|10,1|14,1|16,1|17,1|18,1|19,1|21,2|23,1:292.012:326.675,113.385:0.0990099,0.738271:2.52359e-16,0.000188425,0.999812
-chr1	5457182	.	GAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5457205;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:0.877325:12,12:7-13,7-13:24,22,0,2:8,2|12,19|13,3:8,1|12,1:339.915:366.612,131.36:2.23609,2.23609:8.74e-43,0.00860933,0.991412	0/0:39:0.980078:12,12:10-12,10-12:21,12,0,6:10,2|11,2|12,17:8,1|9,1|10,2|11,2:261.833:326.675,113.385:0.640587,0.640587:1.28858e-27,0.0199597,0.980082
-chr1	5458563	.	GTTGGTTGGTTG	.	.	.	END=5458574;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999991:3,3:3-3,3-3:18,14,0,2:3,18:2,2:209.978:366.612,131.36:0.0,0.0:0.0,1.73614e-05,0.999986	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:191.171:326.675,113.385:0.0,0.0:0.0,2.52026e-07,1.0
-chr1	5467842	.	TTGTTTGTTTGT	.	.	.	END=5467853;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:179.754:366.612,131.36:0.0,0.0:0.0,9.2688e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.865:326.675,113.385:0.0,0.0:0.0,8.0646e-07,1.0
-chr1	5469905	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5469964;RU=ttct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:27:0.779798:15,16:15-15,15-17:9,12,0,5:15,7|16,2:8,1|10,2|13,1|14,1:199.013:366.612,131.36:0.19802,0.57834:9.18276e-12,0.00672041,0.993294	0/0:61:0.998617:15,15:13-16,13-16:13,23,0,23:15,13:2,1|4,2|5,1|7,1|8,2|9,2|10,2|11,6|12,2|13,1|14,3:441.154:326.675,113.385:0.554102,0.554102:2.05185e-19,0.000934836,0.999067
-chr1	5470375	.	ATTTATTTATTTATTTATTT	.	.	.	END=5470394;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999856:5,5:5-5,5-5:16,12,0,2:5,16:4,2:185.188:366.612,131.36:0.0,0.0:0.0,6.52832e-05,0.999934	0/0:35:1.0:5,5:4-5,4-5:19,10,0,5:5,19:4,5:204.259:326.675,113.385:0.270063,0.270063:0.0,5.63075e-06,0.999995
-chr1	5487012	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=5487095;RU=aga;PERIOD=3;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.0641902:1,25:1-27,19-27:0,16,0,6:NULL:7,1|15,1|19,1|21,1|24,1|25,1:194.376:366.612,131.36:10.4167,2.80123:0.814845,0.18449,0.000731844	3/3:29:0.0350084:26,26:26-28,26-28:0,13,0,14:NULL:5,1|8,1|10,1|15,2|16,1|19,1|21,1|22,3|24,1|26,2:224.711:326.675,113.385:0.788731,0.788731:0.213982,0.516544,0.269537
-chr1	5487104	.	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	.	.	END=5487154;RU=gag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.221203:19,19:16-19,16-19:2,9,0,5:19,2:5,1|7,1|8,1|9,1|10,1:132.591:366.612,131.36:1.14809,1.14809:3.42417e-06,0.223225,0.776813	0/0:17:0.227302:17,17:10-17,10-17:3,6,0,7:17,3:5,2|7,1|8,1|10,2|11,1:122.998:326.675,113.385:3.21628,3.21628:1.88104e-06,0.621967,0.378086
-chr1	5491577	.	TTTCTTTCTTTCTTTC	.	.	.	END=5491592;RU=tttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999683:4,4:4-4,4-4:15,6,0,0:4,15:NULL:111.491:366.612,131.36:0.0,0.0:0.0,0.00020738,0.999796	0/0:32:0.999873:4,4:4-4,4-4:16,14,0,2:4,16:2,1|3,1:203.31:326.675,113.385:0.0,0.0:0.0,7.7951e-05,0.999925
-chr1	5495145	.	TATTATTATTAT	.	.	.	END=5495156;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999919:4,4:4-4,4-4:17,17,0,2:4,17:3,2:230.211:366.612,131.36:0.0,0.0:0.0,4.36298e-05,0.999957	0/0:34:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:190.37:326.675,113.385:0.0,0.0:0.0,9.03848e-07,1.0
-chr1	5499413	.	AAACAAACAAAC	.	.	.	END=5499424;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999984:3,3:3-3,3-3:18,9,0,0:3,18:NULL:151.645:366.612,131.36:0.0,0.0:0.0,1.95113e-05,0.99998	0/0:36:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:183.415:326.675,113.385:0.0,0.0:0.0,3.58705e-08,1.0
-chr1	5499767	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	AT	.	.	END=5499818;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00139684:1,1:1-3,1-3:0,4,0,0:NULL:NULL:36.3001:366.612,131.36:0.748295,0.748295:0.364437,0.535353,0.100301	.
-chr1	5504534	.	TATTTATTTATT	.	.	.	END=5504545;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,25,0,2:3,29:2,2:358.683:366.612,131.36:0.0,0.0:0.0,1.36141e-08,1.0	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:216.165:326.675,113.385:0.0,0.0:0.0,3.61663e-07,1.0
-chr1	5513530	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5513567;RU=tc;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.31293:23,23:19-24,19-24:3,13,0,9:23,3:4,1|6,1|7,1|9,1|10,1|18,1|20,1|22,1|23,1:206.714:366.612,131.36:2.04637,2.04637:2.11561e-29,0.066714,0.93338	0/0:34:0.987245:19,19:11-19,11-19:11,10,0,11:19,11:5,1|6,1|8,1|9,1|13,2|14,2|15,3:226.557:326.675,113.385:3.57627,3.57627:1.20532e-13,0.00759209,0.992424
-chr1	5516671	.	TCTCTCTCTCTCTC	.	.	.	END=5516684;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:33,10,0,3:7,33:6,3:244.379:366.612,131.36:0.0,0.0:0.0,5.01572e-10,1.0	0/0:24:0.999066:7,7:7-8,7-8:14,9,0,0:7,14:NULL:143.434:326.675,113.385:0.390807,0.390807:7.46736e-28,0.000425895,0.999576
-chr1	5518233	.	ACACACACACAC	.	.	.	END=5518244;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:6,6:6-6,6-6:20,8,0,0:6,20:NULL:155.727:366.612,131.36:0.0,0.0:4.54e-43,8.39984e-06,0.999994	0/0:40:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:203.485:326.675,113.385:0.139319,0.139319:0.0,1.84411e-08,1.0
-chr1	5522366	.	TTTATTTATTTA	.	.	.	END=5522377;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.998395:3,3:3-3,3-3:13,24,0,0:3,13:NULL:264.156:366.612,131.36:0.0,0.0:5.0445e-41,0.00110037,0.998906	0/0:35:0.99986:3,3:3-3,3-3:16,19,0,0:3,16:NULL:231.943:326.675,113.385:0.0,0.0:0.0,0.000107282,0.999895
-chr1	5526299	.	TTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTATTTATTTATTTAT	.	.	END=5526322;RU=ttat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.999594:6,9:6-9,9-9:8,13,0,2:6,2|9,6:4,1|5,1:173.311:366.612,131.36:1.17184,0.0:1.26762e-24,3.43917e-05,0.99997	0/0:20:0.999737:6,6:6-6,6-6:15,3,0,2:6,15:5,2:102.456:326.675,113.385:0.0,0.0:2.452e-42,0.000103453,0.999896
-chr1	5531371	.	AAATAAATAAATAAAT	.	.	.	END=5531386;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:22,11,0,5:4,22:2,5:220.017:366.612,131.36:0.0,0.0:0.0,1.25235e-06,1.0	0/0:29:0.999984:4,4:4-4,4-4:18,9,0,2:4,18:2,1|3,1:165.399:326.675,113.385:0.0,0.0:0.0,2.12228e-05,0.999979
-chr1	5532982	.	TGTGTGTGTGTGTGTG	TGTGTGTG	.	.	END=5532997;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.0437343:4,4:4-8,4-8:0,23,0,0:NULL:NULL:212.091:366.612,131.36:1.29055,1.29055:0.450508,0.449184,0.100457	0/0:42:1.0:8,8:8-8,8-8:27,12,0,3:8,27:6,1|7,2:250.369:326.675,113.385:0.0,0.0:1.72e-43,5.25782e-08,1.0
-chr1	5534046	.	ATGTATGTATGTATGT	.	.	.	END=5534061;RU=atgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:29,14,0,6:4,29:3,6:287.447:366.612,131.36:0.0990099,0.0990099:0.0,5.60014e-09,1.0	0/0:46:1.0:4,4:4-4,4-4:27,16,0,3:4,27:3,3:272.756:326.675,113.385:0.0,0.0:0.0,1.82221e-08,1.0
-chr1	5534075	.	TATGTATGTATGTATG	.	.	.	END=5534090;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:35,13,0,3:4,35:2,1|3,2:280.629:366.612,131.36:0.0,0.0:0.0,1.11186e-10,1.0	0/0:47:1.0:4,4:4-4,4-4:30,15,0,2:4,30:3,2:273.347:326.675,113.385:0.0,0.0:0.0,3.21582e-09,1.0
-chr1	5534127	.	TGTGTGTGTGTG	.	.	.	END=5534138;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:6,6:6-6,6-6:26,19,0,0:6,26:NULL:275.467:366.612,131.36:0.139319,0.139319:0.0,3.5554e-07,1.0	0/0:55:1.0:6,6:6-6,6-6:31,20,0,4:6,31:4,1|5,3:344.947:326.675,113.385:0.0,0.0:0.0,1.02131e-09,1.0
-chr1	5538600	.	TTTTGTTTTGTTTTG	.	.	.	END=5538614;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.793571:3,3:3-3,3-3:5,25,0,0:3,5:NULL:251.759:366.612,131.36:0.0990099,0.0990099:2.33087e-17,0.156038,0.844041	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.842:326.675,113.385:0.0,0.0:0.0,3.18443e-07,1.0
-chr1	5539245	.	AGAGAGAGAGAG	.	.	.	END=5539256;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:5-6,5-6:24,10,0,2:6,24:4,1|5,1:203.302:366.612,131.36:0.169767,0.169767:0.0,3.64039e-07,1.0	0/0:36:1.0:6,6:6-7,6-7:20,15,0,0:6,20:NULL:216.86:326.675,113.385:0.236383,0.236383:0.0,7.99914e-06,0.999994
-chr1	5541995	.	TCTATCTATCTA	.	.	.	END=5542006;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:198.958:366.612,131.36:0.0,0.0:0.0,7.97423e-06,0.999994	0/0:32:1.0:3,3:3-3,3-3:25,7,0,0:3,25:NULL:162.531:326.675,113.385:0.0,0.0:0.0,1.63627e-07,1.0
-chr1	5543920	.	AAACAAACAAACAAACAAAC	.	.	.	END=5543939;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:5,5:5-5,5-5:27,14,0,5:5,27:3,2|4,3:270.026:366.612,131.36:0.0,0.0:0.0,1.74728e-08,1.0	0/0:43:1.0:5,5:5-5,5-5:32,8,0,3:5,32:4,3:218.073:326.675,113.385:0.0,0.0:0.0,7.62889e-10,1.0
-chr1	5548928	.	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	.	.	END=5548963;RU=gtgtgc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.996997:5,5:4-6,4-6:12,16,0,2:5,12:3,2:215.759:366.612,131.36:0.563226,0.563226:0.999097,0.000907121,4.83865e-25	0/0:40:1.00001:6,6:3-6,3-6:21,12,0,6:6,21:2,1|4,1|5,4:243.175:326.675,113.385:0.650759,0.650759:0.0,1.87243e-06,1.0
-chr1	5568606	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATATATA	.	.	END=5568637;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.191459:12,12:12-13,12-13:2,0,0,0:12,2:NULL:8.72991:366.612,131.36:0.472558,0.472558:0.898586,0.101517,4.30333e-07	0/0:6:0.241205:16,16:11-16,11-16:3,0,0,0:16,3:NULL:13.3392:326.675,113.385:1.94044,1.94044:0.0041078,0.534572,0.461435
-chr1	5568681	.	TCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTC	.	.	END=5568700;RU=tc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.167585:9,9:6-10,6-10:2,1,0,0:9,2:NULL:16.2695:366.612,131.36:1.41933,1.41933:0.676238,0.323648,0.000128575	0/0:4:0.389106:10,10:10-10,10-10:3,1,0,0:10,3:NULL:20.8043:326.675,113.385:0.0,0.0:0.000122906,0.325088,0.674802
-chr1	5568724	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAG	.	.	END=5568751;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.981721:10,11:6-10,6-11:7,1,0,0:10,4|11,3:NULL:42.692:366.612,131.36:1.60988,1.61328:0.999643,0.000360942,2.85432e-12	0/0:8:0.667283:14,14:14-14,14-14:5,3,0,0:14,5:NULL:46.9753:326.675,113.385:0.0,0.0:4.33107e-07,0.162209,0.837866
-chr1	5571339	.	AACAACAACAAC	.	.	.	END=5571350;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.993811:4,4:4-4,4-4:11,9,0,0:4,11:NULL:128.626:366.612,131.36:0.0,0.0:1.40082e-30,0.0044127,0.995598	0/0:28:0.999866:4,4:2-4,2-4:16,9,0,2:4,16:3,2:161.802:326.675,113.385:0.885129,0.885129:3.8e-44,6.70363e-05,0.999934
-chr1	5573523	.	GAAAGAAAGAAAGAAA	.	.	.	END=5573538;RU=gaaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99979:4,4:4-4,4-4:15,12,0,2:4,15:3,2:184.59:366.612,131.36:0.0,0.0:1.7e-44,0.000114813,0.999887	0/0:42:1.0:4,4:4-5,4-5:23,14,0,4:4,23:3,4:249.905:326.675,113.385:0.311527,0.311527:0.0,4.699e-07,1.0
-chr1	5573587	.	AAAGAAAGAAAG	.	.	.	END=5573598;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999662:3,3:3-3,3-3:14,13,0,2:3,14:2,2:192.077:366.612,131.36:0.0,0.0:0.0,0.000165596,0.999835	0/0:41:1.0:3,3:3-3,3-3:24,15,0,2:3,24:3,2:244.91:326.675,113.385:0.0,0.0:0.0,1.01008e-07,1.0
-chr1	5579717	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5579762;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:26:0.03869:26,26:21-26,21-26:0,16,0,8:NULL:7,1|9,1|16,2|18,1|20,1|23,1|26,1:220.015:366.612,131.36:2.18267,2.18267:3.56267e-15,0.437331,0.562764	0/1:30:0.28606:23,25:21-23,21-28:4,10,0,14:23,4:5,1|6,1|8,1|9,1|12,2|13,1|14,1|15,1|17,1|21,1|22,2|25,1:229.174:326.675,113.385:0.446534,1.60396:2.90831e-11,0.000185028,0.999818
-chr1	5581808	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5581829;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999005:12,12:12-12,12-12:14,15,0,6:12,14:5,1|6,1|8,1|9,2|11,1:246.406:366.612,131.36:0.0,0.0:7.50395e-39,0.00022835,0.999773	0/0:16:0.918632:11,11:11-12,11-12:7,5,0,3:11,7:6,1|10,1|11,1:96.9763:326.675,113.385:0.40582,0.40582:1.2915e-18,0.016726,0.983311
-chr1	5585680	.	CTCTCTCTCTCT	CTCTCTCTCTCTCT	.	.	END=5585691;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.716874:6,7:6-6,6-7:13,10,0,0:6,11|7,2:NULL:153.498:366.612,131.36:0.0,0.491073:1.32097e-24,0.000262666,0.999742	0/0:19:0.985692:6,6:6-6,6-6:10,9,0,0:6,10:NULL:122.269:326.675,113.385:0.0,0.0:2.78805e-20,0.00890045,0.99112
-chr1	5589327	.	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	.	.	END=5589356;RU=ggt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.975048:12,12:12-12,12-12:9,13,0,2:12,9:7,2:169.879:366.612,131.36:0.0,0.0:3.58951e-33,0.00724252,0.992775	0/0:24:0.964384:10,10:9-10,9-10:8,11,0,4:10,8:4,1|5,1|9,2:162.775:326.675,113.385:0.465241,0.465241:2.92195e-21,0.0195605,0.980478
-chr1	5589376	.	TGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5589399;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.122528:23,23:19-23,19-23:2,12,0,0:23,2:NULL:116.017:366.612,131.36:1.34493,1.34493:0.0,0.0,1.0	0/0:28:0.992728:12,12:9-12,9-12:11,11,0,4:12,11:7,1|10,1|11,2:180.542:326.675,113.385:1.30955,1.30955:2.36841e-16,0.00337366,0.996634
-chr1	5589780	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5589835;RU=tg;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.684515:22,22:22-22,22-22:5,9,0,11:22,5:9,2|10,2|12,1|15,3|17,2|20,1:194.5:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.434615:28,28:25-29,25-29:4,10,0,15:28,4:4,1|8,2|10,2|11,1|13,2|14,2|18,2|19,1|21,1|26,1:229.133:326.675,113.385:1.42595,1.42595:5.64146e-05,0.301819,0.698134
-chr1	5592598	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5592667;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0124984:36,36:2-36,2-36:0,10,0,6:NULL:8,1|17,1|22,1|23,1|33,1|34,1:142.041:366.612,131.36:12.4172,12.4172:0.208392,0.695051,0.0966789	0/0:36:0.217245:35,35:30-35,30-35:2,17,0,16:35,2:5,1|6,2|10,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|26,1|28,1|29,1|34,2:297.947:326.675,113.385:1.11605,1.11605:0.00272634,0.394995,0.602354
-chr1	5593742	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5593777;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.887398:18,19:16-22,16-22:6,10,0,5:18,4|19,2:6,1|8,1|9,2|11,1:165.187:366.612,131.36:1.81321,1.54443:3.33702e-07,0.0161178,0.983918	0/0:40:0.971211:18,18:17-18,17-18:16,12,0,11:17,3|18,13:4,1|5,1|7,1|9,1|11,1|12,1|13,2|14,1|15,1|17,1:276.968:326.675,113.385:0.323567,0.323567:7.60834e-14,0.0281487,0.971905
-chr1	5594362	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594409;RU=acagatatcagc;PERIOD=12;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.99997:4,4:4-4,4-4:19,9,0,7:4,19:2,4|3,3:214.928:366.612,131.36:0.0,0.0:2.03387e-23,3.57251e-05,0.999964	0/0:29:0.993895:4,4:4-4,4-4:11,12,0,6:4,11:3,6:194.69:326.675,113.385:0.0,0.0:1.35695e-13,0.00487052,0.995139
-chr1	5594483	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594518;RU=acagatatcagc;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.992171:3,3:3-3,3-3:10,9,0,6:3,10:2,5|3,1:162.564:366.612,131.36:0.0,0.0:1.07008e-20,0.00423133,0.995779	0/0:27:0.99893:3,3:3-3,3-3:13,11,0,3:3,13:2,2|3,1:171.44:326.675,113.385:0.0,0.0:2.17272e-24,0.000780489,0.999225
-chr1	5601522	.	CTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5601537;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.381909:19,19:16-19,16-19:3,10,0,3:19,3:6,1|11,1|18,1:127.14:366.612,131.36:0.550196,0.550196:0.0,0.0,1.0	0/0:10:0.859694:8,8:6-8,6-8:7,2,0,0:8,7:NULL:47.0547:326.675,113.385:0.81164,0.81164:3.07523e-11,0.0813469,0.918751
-chr1	5601538	.	CACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACA	.	.	END=5601571;RU=ca;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0438883:20,20:20-23,20-23:0,8,0,7:NULL:4,1|5,1|6,2|9,1|13,2:127.313:366.612,131.36:1.37748,1.37748:0.0,0.0,1.0	1/1:12:0.226687:15,15:15-17,15-17:2,4,0,4:15,2:4,1|8,1|10,1|14,1:74.861:326.675,113.385:0.733609,0.733609:0.596184,0.403375,0.000510556
-chr1	5605789	.	TATATATATATA	.	.	.	END=5605800;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.999173:6,6:6-6,6-6:14,6,0,0:6,14:NULL:109.551:366.612,131.36:0.0,0.0:1.50464e-25,0.000455149,0.999546	0/0:11:0.680517:6,6:6-7,6-7:5,5,0,0:6,5:NULL:67.2546:326.675,113.385:0.491073,0.491073:1.41842e-09,0.179353,0.820711
-chr1	5607518	.	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTC,CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	.	.	END=5607567;RU=ccctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:6:0.0428456:7,7:2-8,2-8:0,3,0,3:NULL:5,2|6,1:47.4534:366.612,131.36:1.42106,1.42106:1.0,0.0,0.0	1/1:4:0.0418975:6,6:6-9,6-9:0,3,0,0:NULL:NULL:28.9:326.675,113.385:1.35727,1.35727:0.366524,0.478544,0.154989
-chr1	5609483	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=5609534;RU=tctt;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:27:0.457214:16,18:13-16,13-18:8,9,0,9:13,3|16,5:2,1|3,1|4,1|7,2|8,1|13,1|16,1|18,1:204.837:366.612,131.36:1.26965,2.41742:5.45352e-38,3.81258e-08,1.0	1/0:36:0.820827:12,13:8-13,13-13:9,13,0,13:12,2|13,7:4,1|5,1|6,3|7,3|9,1|10,3|12,1:260.367:326.675,113.385:1.75429,0.0:1.0024e-14,0.823073,0.176996
-chr1	5609614	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5609639;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.974538:19,24:16-24,19-24:4,6,0,3:19,2|24,2:9,1|12,1|16,1:103.857:366.612,131.36:1.59046,1.91609:0.0,0.0,1.0	0/0:20:0.542862:13,13:11-13,11-13:4,12,0,4:13,4:7,2|9,1|11,1:160.209:326.675,113.385:0.497617,0.497617:1.63911e-05,0.276384,0.723601
-chr1	5612315	.	CTGGCTGGCTGG	.	.	.	END=5612326;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998233:3,3:3-3,3-3:13,15,0,0:3,13:NULL:191.934:366.612,131.36:0.0,0.0:2.74e-42,0.00100296,0.998999	0/0:22:0.940243:3,3:3-3,3-3:7,15,0,0:3,7:NULL:175.706:326.675,113.385:0.0,0.0:7.17578e-23,0.0445383,0.955537
-chr1	5612776	.	TTTATTTATTTA	.	.	.	END=5612787;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999995:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.896:366.612,131.36:0.0,0.0:0.0,1.15696e-05,0.999987	0/0:18:0.999421:3,3:3-3,3-3:14,4,0,0:3,14:NULL:91.4822:326.675,113.385:0.0,0.0:5.724e-42,0.000277712,0.999727
-chr1	5614359	.	TCCCTCCCTCCCTCCC	.	.	.	END=5614374;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998846:4,4:4-4,4-4:13,11,0,2:4,13:2,1|3,1:165.446:366.612,131.36:0.0,0.0:3.5e-44,0.00055509,0.999447	0/0:28:0.999522:4,4:4-4,4-4:15,13,0,0:4,15:NULL:179.777:326.675,113.385:0.0,0.0:0.0,0.000362995,0.999637
-chr1	5616757	.	AAGCAAGCAAGC	.	.	.	END=5616768;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999861:3,3:3-3,3-3:16,17,0,0:3,16:NULL:219.518:366.612,131.36:0.0,0.0:0.0,8.99908e-05,0.999911	0/0:26:0.999902:3,3:3-3,3-3:16,8,0,2:3,16:2,2:151.309:326.675,113.385:0.0,0.0:0.0,4.69939e-05,0.999956
-chr1	5617140	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5617189;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:30:0.290156:25,43:24-26,23-43:5,6,0,16:25,5:5,1|6,1|8,1|12,2|14,1|20,2|21,2|22,3|23,1|24,1|43,1:206.925:366.612,131.36:0.344122,8.89312:2.08458e-12,2.3267e-06,1.0	0/0:26:0.343833:25,25:24-26,24-26:11,6,0,9:24,3|25,6|26,2:7,1|9,1|11,1|15,1|17,1|18,1|19,1|20,1|23,1:192.044:326.675,113.385:0.713833,0.713833:5.2481e-07,0.146591,0.853494
-chr1	5617615	.	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	.	.	END=5617699;RU=ttctc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.287728:17,17:14-19,14-19:2,2,0,10:17,2:6,1|7,2|11,1|12,4|16,2:101.018:366.612,131.36:0.856307,0.856307:4.75116e-05,0.26636,0.733597	1/1:9:0.0362275:20,20:16-20,16-20:0,1,0,7:NULL:4,1|6,1|10,1|13,1|15,1|16,2:57.8107:326.675,113.385:1.3165,1.3165:0.059034,0.378311,0.562803
-chr1	5618977	.	CAGCAGCAGCAG	.	.	.	END=5618988;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,18,0,0:4,23:NULL:253.62:366.612,131.36:0.0,0.0:0.0,8.95862e-07,1.0	0/0:31:0.999995:4,4:4-4,4-4:20,11,0,0:4,20:NULL:187.212:326.675,113.385:0.0,0.0:0.0,1.45056e-05,0.999987
-chr1	5620595	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5620640;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.138323:25,25:21-25,21-25:2,14,0,9:25,2:5,1|6,1|7,1|12,1|13,2|15,1|20,1|23,1:216.568:366.612,131.36:0.923821,0.923821:3.11768e-12,0.378233,0.621819	0/0:23:0.370281:23,23:22-24,22-24:6,4,0,12:22,2|23,4:6,1|7,2|11,1|12,1|18,1|19,1|20,1|21,1|22,3:165.941:326.675,113.385:0.722976,0.722976:0.000106707,0.555466,0.444532
-chr1	5623551	.	TTATTTTATTTTATT	.	.	.	END=5623565;RU=ttatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.671791:3,3:1-3,1-3:5,10,0,0:3,5:NULL:113.692:366.612,131.36:0.390054,0.390054:2.78286e-16,0.187197,0.812863	0/0:21:0.999475:3,3:3-3,3-3:14,5,0,2:3,14:2,2:115.762:326.675,113.385:0.0,0.0:1e-44,0.000232575,0.999772
-chr1	5625250	.	CACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5625297;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.291461:22,33:22-22,21-35:11,19,0,15:21,2|22,9:8,1|9,3|11,2|16,3|17,1|18,2|19,1|21,1|32,1:360.412:366.612,131.36:0.0,5.49805:9.90578e-05,0.999903,3.27363e-12	0/0:53:0.576253:24,24:23-24,23-24:22,19,0,11:23,7|24,15:7,1|8,1|10,1|12,1|16,1|20,1|21,2|22,2|23,1:376.926:326.675,113.385:0.452422,0.452422:2.10056e-11,0.4238,0.576288
-chr1	5626755	.	TATATATATATATA	TA	.	.	END=5626768;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.00338735:1,1:1-4,1-4:0,5,0,0:NULL:NULL:46.7652:366.612,131.36:0.896026,0.896026:0.0533552,0.4034,0.543409	0/0:11:0.951073:7,7:7-7,7-7:8,3,0,0:7,8:NULL:57.6703:326.675,113.385:0.0,0.0:2.05221e-11,0.0266218,0.973432
-chr1	5627434	.	ACCCACCCACCC	.	.	.	END=5627445;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.439336:3,3:3-3,3-3:3,1,0,0:3,3:NULL:21.193:366.612,131.36:0.29703,0.29703:7.97056e-09,0.185254,0.814805	0/0:13:0.981742:3,3:3-3,3-3:9,4,0,0:3,9:NULL:71.9961:326.675,113.385:0.0,0.0:7.77127e-24,0.00726744,0.992752
-chr1	5628800	.	GTGTGTGTGTGT	.	.	.	END=5628811;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999987:6,6:6-6,6-6:19,26,0,0:6,19:NULL:306.178:366.612,131.36:0.0,0.0:2.44924e-39,2.24444e-05,0.999979	0/0:32:0.999816:6,6:6-6,6-6:16,16,0,0:6,16:NULL:198.309:326.675,113.385:0.0,0.0:1.65706e-33,0.000107345,0.999895
-chr1	5634536	.	ACATACATACAT	.	.	.	END=5634547;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999781:3,3:3-3,3-3:15,18,0,2:3,15:2,2:241.613:366.612,131.36:0.0,0.0:5.3e-44,0.000139803,0.999864	0/0:24:0.999689:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.811:326.675,113.385:0.0,0.0:3.2e-44,0.000172858,0.999827
-chr1	5645300	.	CCACCCACCCACCCAC	.	.	.	END=5645315;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,14,0,3:4,26:2,1|3,2:257.308:366.612,131.36:0.0,0.0:0.0,5.39436e-08,1.0	0/0:20:0.987727:4,4:4-4,4-4:10,10,0,0:4,10:NULL:132.37:326.675,113.385:0.0,0.0:1.37064e-33,0.00887219,0.991149
-chr1	5648208	.	TTTCTTTCTTTC	.	.	.	END=5648219;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:236.188:366.612,131.36:0.0,0.0:0.0,3.50995e-06,1.0	0/0:19:0.998321:3,3:3-3,3-3:13,6,0,0:3,13:NULL:107.261:326.675,113.385:0.0,0.0:4.6e-44,0.00108233,0.998922
-chr1	5658059	.	AACCAACCAACCAACCAACCAACCAACCAACC	.	.	.	END=5658090;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.997758:8,8:8-8,8-8:12,19,0,6:8,12:5,3|6,1|7,2:270.432:366.612,131.36:0.0,0.0:4.34303e-37,0.00122251,0.998784	0/0:22:0.995541:8,8:8-8,8-8:11,4,0,7:8,11:3,2|6,2|7,3:134.487:326.675,113.385:0.0,0.0:2.63941e-34,0.0014174,0.998587
-chr1	5659996	.	ACACACACACACAC	.	.	.	END=5660009;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999491:7,7:7-7,7-7:15,22,0,2:7,15:5,2:281.623:366.612,131.36:0.0,0.0:5.3889e-37,0.000244781,0.999758	0/0:32:1.00001:7,7:7-7,7-7:23,7,0,2:7,23:5,1|6,1:172.037:326.675,113.385:0.0,0.0:0.0,5.81845e-07,1.0
-chr1	5667369	.	TTGTTTTGTTTTGTT	.	.	.	END=5667383;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999211:3,3:3-3,3-3:14,19,0,0:3,14:NULL:237.415:366.612,131.36:0.0,0.0:1e-45,0.00064475,0.999356	0/0:19:0.991355:3,3:3-3,3-3:10,9,0,0:3,10:NULL:123.116:326.675,113.385:0.0,0.0:3.09465e-33,0.00534692,0.994664
-chr1	5668188	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5668233;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.973632:17,17:16-17,16-17:16,18,0,8:16,3|17,13:5,2|7,1|8,1|13,1|15,1|16,2:309.774:366.612,131.36:0.345543,0.345543:1.0,0.0,0.0	0/0:29:0.878676:23,23:22-23,22-23:7,12,0,9:23,7:8,1|12,2|15,2|16,2|17,1|20,1:213.066:326.675,113.385:0.298675,0.298675:7.90049e-11,0.0683182,0.931775
-chr1	5668714	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5668747;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:49:0.306761:28,31:28-30,29-32:5,13,0,30:28,3|29,2:4,1|5,1|6,1|7,1|8,2|9,1|10,2|12,1|13,1|14,1|15,1|16,1|17,1|18,5|22,2|23,2|24,1|27,1|28,1|30,1|31,2:394.435:366.612,131.36:0.553571,0.556925:0.0,0.0,1.0	0/0:47:0.937667:17,17:17-18,17-18:21,12,0,12:17,18|18,3:6,1|7,1|8,2|10,2|12,1|13,1|15,3|16,1:308.257:326.675,113.385:0.334882,0.334882:4.03709e-26,5.38759e-06,0.999995
-chr1	5683487	.	CAAACAAACAAACAAA	.	.	.	END=5683502;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:221.239:366.612,131.36:0.0,0.0:0.0,1.81181e-06,1.0	0/0:32:0.999211:4,4:3-4,3-4:13,15,0,3:4,13:3,3:210.706:326.675,113.385:0.40582,0.40582:2.35e-43,0.000417593,0.999584
-chr1	5686946	.	ACTCCACTCCACTCCACTCCACTCC	.	.	.	END=5686970;RU=actcc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:5,5:5-5,5-5:20,16,0,3:5,20:3,3:251.76:366.612,131.36:0.0,0.0:0.0,1.09203e-05,0.999993	0/0:36:1.00001:5,5:5-5,5-5:21,11,0,4:5,21:3,2|4,2:214.731:326.675,113.385:0.0,0.0:0.0,1.48824e-06,1.0
-chr1	5691957	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5691994;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0317843:25,25:25-29,25-29:0,7,0,5:NULL:4,1|18,1|20,1|22,2:107.25:366.612,131.36:1.14347,1.14347:0.0,0.0,1.0	1/0:25:0.774457:18,19:16-19,19-19:6,7,0,11:18,2|19,4:6,2|7,1|8,1|9,2|10,1|13,1|17,1|18,2:184.123:326.675,113.385:1.0388,0.139319:1.04829e-05,0.781348,0.218685
-chr1	5702366	.	GGGTGGGTGGGT	.	.	.	END=5702377;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.928342:3,3:3-3,3-3:7,18,0,0:3,7:NULL:186.16:366.612,131.36:0.0,0.0:1.29376e-20,0.0464803,0.953593	0/0:39:0.952356:3,3:3-3,3-3:7,30,0,2:3,7:2,2:314.196:326.675,113.385:0.0,0.0:6.10428e-21,0.0250173,0.975031
-chr1	5703039	.	TTTCTTTCTTTC	.	.	.	END=5703050;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:177.97:366.612,131.36:0.0,0.0:0.0,6.52669e-08,1.0	0/0:23:0.999954:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.288:326.675,113.385:0.0,0.0:0.0,1.64207e-05,0.999986
-chr1	5703348	.	TCTCTCTCTCTC	.	.	.	END=5703359;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999335:6,6:6-7,6-7:14,9,0,0:6,14:NULL:139.208:366.612,131.36:0.323567,0.323567:5.59831e-29,0.000328401,0.999674	0/0:34:0.999944:6,6:6-6,6-6:17,15,0,2:6,17:5,1|6,1:213.761:326.675,113.385:0.0,0.0:4.966e-42,1.96654e-05,0.99998
-chr1	5705129	.	TTTATTTATTTA	.	.	.	END=5705140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999745:3,3:3-3,3-3:14,13,0,4:3,14:2,4:207.898:366.612,131.36:0.0,0.0:0.0,0.000127164,0.999873	0/0:29:0.999993:3,3:3-3,3-3:18,9,0,2:3,18:2,2:172.875:326.675,113.385:0.0,0.0:0.0,1.42805e-05,0.999987
-chr1	5705229	.	CCCACCCACCCA	.	.	.	END=5705240;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:230.431:366.612,131.36:0.0,0.0:0.0,2.13014e-06,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.539:326.675,113.385:0.0,0.0:0.0,2.42264e-06,1.0
-chr1	5706741	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=5706764;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999701:7,7:6-7,6-7:15,10,0,0:7,15:NULL:155.182:366.612,131.36:0.311527,0.311527:0.0,0.000164888,0.999835	0/0:29:0.99992:6,6:5-6,5-6:17,8,0,3:6,17:3,2|5,1:162.246:326.675,113.385:0.236383,0.236383:0.0,4.85328e-05,0.999955
-chr1	5708798	.	TTTATTTATTTA	.	.	.	END=5708809;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:28,18,0,0:3,28:NULL:273.838:366.612,131.36:0.0,0.0:0.0,2.28799e-08,1.0	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.191:326.675,113.385:0.0,0.0:0.0,5.58044e-06,0.999995
-chr1	5709925	.	TTCTTTCTTTCT	TTCTTTCT	.	.	END=5709936;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:1.0:2,2:2-2,2-2:19,16,0,0:2,19:NULL:225.294:366.612,131.36:0.0,0.0:0.999993,1.1175e-05,0.0	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:224.239:326.675,113.385:0.0,0.0:0.0,9.42141e-08,1.0
-chr1	5710226	.	TTGTTTTGTTTTGTTTTGTT	.	.	.	END=5710245;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:2-4,2-4:32,19,0,2:4,32:2,1|3,1:318.661:366.612,131.36:0.507951,0.507951:0.0,1.20364e-09,1.0	0/0:47:1.0:4,4:4-4,4-4:23,19,0,5:4,23:2,1|3,4:301.264:326.675,113.385:0.0,0.0:0.0,4.63585e-07,1.0
-chr1	5712340	.	AAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAAC	.	.	END=5712369;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.780734:2,2:2-2,2-2:5,14,0,0:2,5:NULL:149.149:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/0:21:0.997542:6,6:6-6,6-6:12,6,0,3:6,12:2,1|3,1|5,1:124.805:326.675,113.385:0.0,0.0:2.80473e-30,0.00135867,0.998648
-chr1	5718275	.	TTTATTTATTTA	.	.	.	END=5718286;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:246.484:366.612,131.36:0.0,0.0:0.0,3.01196e-06,1.0	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.25:326.675,113.385:0.0,0.0:0.0,2.59941e-06,1.0
-chr1	5722194	.	TATATATATATA	TATATATATATATA	.	.	END=5722205;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.999787:7,7:7-7,7-7:16,17,0,0:7,16:NULL:216.966:366.612,131.36:0.0,0.0:4.42e-42,7.55325e-05,0.999926	0/0:12:0.936977:6,6:5-7,5-7:8,2,0,0:6,8:NULL:48.6909:326.675,113.385:0.651813,0.651813:1.33637e-13,0.034441,0.965621
-chr1	5722249	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5722268;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999984:4,4:4-4,4-4:18,16,0,2:4,18:3,2:229.225:366.612,131.36:0.0,0.0:0.0,2.02604e-05,0.99998	0/0:18:0.995876:4,4:4-4,4-4:11,5,0,2:4,11:3,2:99.6182:326.675,113.385:0.0,0.0:5.11647e-38,0.0017386,0.998268
-chr1	5727994	.	ATACATACATAC	.	.	.	END=5728005;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:199.933:366.612,131.36:0.0,0.0:0.0,2.5561e-07,1.0	0/0:12:0.919973:3,3:3-3,3-3:7,5,0,0:3,7:NULL:75.9551:326.675,113.385:0.0,0.0:7.27925e-25,0.0435556,0.956519
-chr1	5733779	.	ACCCACCCACCC	.	.	.	END=5733790;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.995933:3,3:3-3,3-3:11,31,0,0:3,11:NULL:317.64:366.612,131.36:0.0,0.0:2.46417e-33,0.00271117,0.997298	0/0:22:0.930157:3,3:3-3,3-3:7,15,0,0:3,7:NULL:161.446:326.675,113.385:0.0,0.0:3.30203e-21,0.0487605,0.951318
-chr1	5742710	.	GGGTGGGTGGGT	.	.	.	END=5742721;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998455:3,3:3-3,3-3:11,27,0,2:3,11:2,2:291.594:366.612,131.36:0.0,0.0:2.44778e-34,0.000965837,0.999036	0/0:42:0.958695:3,3:3-3,3-3:7,33,0,2:3,7:2,2:337.752:326.675,113.385:0.0,0.0:8.78633e-22,0.0259419,0.974111
-chr1	5743415	.	TTTATTTATTTA	.	.	.	END=5743426;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,21,0,0:3,22:NULL:279.685:366.612,131.36:0.0,0.0:0.0,2.47098e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:27,14,0,0:3,27:NULL:231.169:326.675,113.385:0.0,0.0:0.0,4.34196e-08,1.0
-chr1	5743494	.	CCCACCCACCCACCCA	.	.	.	END=5743509;RU=ccca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.987266:4,4:4-4,4-4:10,30,0,0:4,10:NULL:311.546:366.612,131.36:0.0,0.0:2.71427e-30,0.0104821,0.989543	0/0:38:0.997609:4,4:4-4,4-4:12,23,0,3:4,12:2,1|3,2:280.913:326.675,113.385:0.0,0.0:5.76151e-36,0.00168956,0.998315
-chr1	5749087	.	CTCTTGCTCTTGCTCTTG	.	.	.	END=5749104;RU=ctcttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999994:3,3:3-3,3-3:20,23,0,2:3,20:2,2:306.234:366.612,131.36:0.0,0.0:0.0,1.8489e-05,0.999985	0/0:39:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:211.324:326.675,113.385:0.0,0.0:0.0,2.97405e-08,1.0
-chr1	5759909	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5759948;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.929275:26,26:25-26,25-26:11,14,0,14:25,2|26,9:7,1|11,3|15,2|17,1|18,1|19,1|20,1|22,1|23,1|24,1|25,1:288.672:366.612,131.36:0.195027,0.195027:0.0,0.0,1.0	0/0:31:0.96388:20,20:18-21,18-21:13,9,0,7:18,2|20,11:9,1|10,1|11,2|18,1|19,1|20,1:200.219:326.675,113.385:0.49505,0.49505:7.4202e-20,0.0325171,0.967542
-chr1	5762305	.	AGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAG	.	.	END=5762320;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:29:0.990522:8,9:8-9,9-9:8,17,0,4:8,2|9,6:4,1|5,1|7,2:232.974:366.612,131.36:0.419363,0.0990099:6.99306e-19,0.000572497,0.999431	0/0:33:0.999964:8,8:8-8,8-8:18,13,0,2:8,18:5,1|6,1:200.676:326.675,113.385:0.0,0.0:6.50713e-37,2.77855e-05,0.999972
-chr1	5769922	.	TTGTTTGTTTGTTTGTTTGT	TTGTTTGTTTGTTTGTTTGTTTGT	.	.	END=5769941;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999988:6,6:5-6,5-6:19,13,0,6:6,19:3,3|5,3:242.009:366.612,131.36:0.169767,0.169767:0.0,2.48747e-06,1.0	0/0:30:0.999919:5,5:5-5,5-5:16,10,0,4:5,16:4,4:189.343:326.675,113.385:0.0,0.0:0.0,3.41362e-05,0.99997
-chr1	5772735	.	AAATAAATAAATAAAT	.	.	.	END=5772750;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.99989:4,4:4-4,4-4:16,22,0,4:4,16:2,1|3,3:292.378:366.612,131.36:0.0,0.0:0.0,6.38866e-05,0.99994	0/0:28:0.999846:4,4:4-4,4-4:17,11,0,0:4,17:NULL:171.988:326.675,113.385:0.0,0.0:0.0,0.000125561,0.999879
-chr1	5773613	.	GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	GGAGGGGAGGGGAGGGGAGGGGAGG,GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	.	.	END=5773672;RU=ggagg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:4:0.0340636:7,7:3-7,3-7:0,0,0,4:NULL:2,1|3,1|5,1|7,1:28.2102:366.612,131.36:1.30122,1.30122:1.0,0.0,0.0	1/1:7:0.0502929:5,5:4-6,4-6:0,2,0,5:NULL:3,2|4,2|5,1:52.5778:326.675,113.385:0.782491,0.782491:1.0,0.0,0.0
-chr1	5774929	.	AAAATAAAATAAAATAAAATAAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT,AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	.	.	END=5774963;RU=aaaat;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.996759:13,14:4-13,4-14:6,11,0,2:13,4|14,2:2,2:151.098:366.612,131.36:3.55444,4.36098:9.05931e-17,0.00197197,0.998034	0/0:32:0.999866:7,7:6-7,6-7:16,9,0,6:7,16:3,2|4,2|5,2:193.838:326.675,113.385:0.311527,0.311527:6.10738e-38,9.78369e-05,0.999903
-chr1	5775613	.	AAACAAACAAACAAAC	.	.	.	END=5775628;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999805:4,4:4-4,4-4:16,15,0,0:4,16:NULL:202.513:366.612,131.36:0.0,0.0:0.0,0.000142664,0.999858	0/0:42:1.00001:4,4:4-4,4-4:21,16,0,5:4,21:3,5:266.998:326.675,113.385:0.0,0.0:0.0,1.32175e-06,1.0
-chr1	5779912	.	AATAATAATAATAAT	.	.	.	END=5779926;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.989972:5,5:5-5,5-5:10,7,0,0:5,10:NULL:100.348:366.612,131.36:0.0,0.0:2.77029e-22,0.00627996,0.993737	0/0:15:0.738405:5,5:5-5,5-5:5,10,0,0:5,5:NULL:112.525:326.675,113.385:0.29703,0.29703:1.91527e-11,0.178554,0.821514
-chr1	5780434	.	CATTGTGAGCATTGTGAGCATTGTGAG	.	.	.	END=5780460;RU=cattgtgag;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999298:3,3:3-3,3-3:13,17,0,3:3,13:2,3:230.502:366.612,131.36:0.0,0.0:6.7e-43,0.000502598,0.9995	0/0:26:0.999569:3,3:3-3,3-3:15,11,0,0:3,15:NULL:167.59:326.675,113.385:0.0,0.0:0.0,0.000368101,0.999636
-chr1	5781296	.	TTATTATTATTA	TTATTATTA	.	.	END=5781307;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99987:3,3:3-3,3-3:16,16,0,0:3,16:NULL:215.133:366.612,131.36:0.0,0.0:0.999926,7.53605e-05,1.81e-43	0/0:30:1.00001:4,4:4-4,4-4:20,8,0,2:4,20:3,2:164.757:326.675,113.385:0.0,0.0:0.0,3.46079e-06,1.0
-chr1	5783455	.	GTGGGTGGGTGG	GTGGGTGGGTGGGTGGGTGGGTGGGTGG	.	.	END=5783466;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.959332:7,7:7-7,7-7:8,3,0,0:7,8:NULL:63.0944:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/1:47:1.0:3,7:3-3,7-7:24,23,0,0:3,18|7,6:NULL:317.768:326.675,113.385:0.0,0.557277:0.0,2.32863e-16,1.0
-chr1	5785041	.	TAAATAAATAAA	.	.	.	END=5785052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999171:3,3:3-3,3-3:13,10,0,4:3,13:2,4:166.912:366.612,131.36:0.0,0.0:1.023e-42,0.000293774,0.999706	0/0:25:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:132.735:326.675,113.385:0.0,0.0:0.0,9.0504e-06,0.999994
-chr1	5785417	.	TTATTTATTTAT	.	.	.	END=5785428;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:191.362:366.612,131.36:0.0,0.0:0.0,5.39921e-08,1.0	0/0:52:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:296.537:326.675,113.385:0.0,0.0:0.0,1.65893e-09,1.0
-chr1	5791745	.	CACACACACACACA	CACACA,CACACACA	.	.	END=5791758;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.98971:3,4:3-4,3-4:6,27,0,0:3,2|4,4:NULL:277.703:366.612,131.36:0.422855,0.326282:0.999879,0.000123949,6.18505e-28	0/0:67:1.0:7,7:6-7,6-7:43,18,0,6:6,3|7,38|8,2:6,6:405.178:326.675,113.385:0.195027,0.195027:0.0,6.50369e-07,1.0
-chr1	5793084	.	AATAAATAAATA	.	.	.	END=5793095;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999877:3,3:3-3,3-3:17,13,0,2:3,17:2,2:202.902:366.612,131.36:0.0,0.0:0.0,6.08471e-05,0.999941	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:160.328:326.675,113.385:0.0,0.0:0.0,1.96478e-07,1.0
-chr1	5795883	.	TAAATAAATAAA	.	.	.	END=5795894;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:200.221:366.612,131.36:0.0,0.0:0.0,4.6765e-06,0.999995	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.643:326.675,113.385:0.0,0.0:0.0,8.64019e-08,1.0
-chr1	5796091	.	TTTGTTTTGTTTTGT	.	.	.	END=5796105;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999901:3,3:3-3,3-3:16,9,0,0:3,16:NULL:145.659:366.612,131.36:0.0,0.0:0.0,6.52105e-05,0.999934	0/0:38:1.0:3,3:3-3,3-3:30,8,0,0:3,30:NULL:194.535:326.675,113.385:0.0,0.0:0.0,4.90667e-09,1.0
-chr1	5796722	.	AATAAATAAATA	.	.	.	END=5796733;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:1-3,1-3:22,13,0,0:3,22:NULL:202.736:366.612,131.36:0.540126,0.540126:0.0,1.23798e-06,1.0	0/0:33:0.999991:3,3:2-3,2-3:18,14,0,0:3,18:NULL:203.111:326.675,113.385:0.35561,0.35561:0.0,1.86871e-05,0.999985
-chr1	5797431	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=5797454;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:1.0:5,5:5-5,5-5:35,10,0,3:5,35:2,1|4,2:256.075:366.612,131.36:0.0,0.0:1.0,1.1966e-10,0.0	0/0:36:1.0:6,6:4-6,4-6:23,6,0,5:6,23:4,3|5,2:186.325:326.675,113.385:0.410384,0.410384:0.0,4.34187e-07,1.0
-chr1	5799311	.	TATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA	.	.	END=5799348;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:9:0.486078:18,18:17-18,17-18:4,4,0,0:18,4:NULL:54.5028:366.612,131.36:0.374147,0.374147:0.76037,0.238382,0.0012729	1/0:14:0.982163:17,19:6-19,6-19:9,2,0,0:17,4|19,5:NULL:65.3645:326.675,113.385:4.72276,4.99312:1.88777e-05,0.990785,0.00921863
-chr1	5799404	.	TAAATAAATAAA	.	.	.	END=5799415;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.988207:3,3:3-3,3-3:10,8,0,0:3,10:NULL:113.088:366.612,131.36:0.0,0.0:9.73386e-29,0.00654213,0.993474	0/0:18:0.998939:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.1688:326.675,113.385:0.0,0.0:1.8887e-37,0.000540242,0.999462
-chr1	5800120	.	TTATTATTATTATTA	.	.	.	END=5800134;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999937:5,5:5-5,5-5:18,11,0,0:5,18:NULL:179.431:366.612,131.36:0.0,0.0:0.0,4.3944e-05,0.999957	0/0:22:0.99239:5,5:5-5,5-5:11,11,0,0:5,11:NULL:145.145:326.675,113.385:0.0,0.0:9.87934e-32,0.00529762,0.994716
-chr1	5803800	.	CAACAACAACAACAA	CAACAACAACAACAACAACAACAACAACAACAACAA	.	.	END=5803814;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999723:12,12:11-12,11-12:15,13,0,10:12,15:4,3|6,2|7,1|8,2|11,2:256.851:366.612,131.36:0.169767,0.169767:0.0,0.0,1.0	0/0:37:1.0:5,5:5-5,5-5:24,8,0,5:5,24:4,5:208.194:326.675,113.385:0.0,0.0:0.0,1.5221e-07,1.0
-chr1	5813834	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=5813884;RU=tct;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:14:0.279533:18,23:17-23,17-23:2,3,0,8:18,2:4,1|7,1|9,1|11,1|12,1|17,1|18,1|23,1:97.0994:366.612,131.36:1.15753,2.37116:1.86078e-27,9.98403e-06,0.999993	1/0:45:0.94456:16,17:16-17,17-17:12,23,0,10:16,3|17,9:4,1|7,1|9,1|10,1|11,2|13,1|14,1|15,1|16,1:356.573:326.675,113.385:0.469019,0.0:1.41439e-15,0.94468,0.0554052
-chr1	5813889	.	TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	TTCTT,TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	.	.	END=5813933;RU=ttctt;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/2:51:0.610104:9,12:9-9,11-13:9,22,0,20:9,9:3,2|4,2|5,1|6,4|7,3|8,5|11,2|12,1:399.269:326.675,113.385:0.0,0.613702:1e-45,9.28955e-22,1.0
-chr1	5819521	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=5819540;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.998514:6,6:6-6,6-6:14,23,0,5:6,14:2,1|3,1|4,1|5,2:314.068:366.612,131.36:0.0,0.0:0.0,0.000353151,0.999651	0/0:40:0.999981:5,5:5-5,5-5:18,15,0,7:5,18:2,1|3,4|4,2:261.639:326.675,113.385:0.0,0.0:0.0,1.39299e-05,0.999987
-chr1	5829633	.	TTCCTTCCTTCC	.	.	.	END=5829644;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.998494:3,3:3-3,3-3:13,14,0,0:3,13:NULL:182.139:366.612,131.36:0.0,0.0:1.5e-44,0.000928731,0.999074	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:244.365:326.675,113.385:0.0,0.0:0.0,5.32516e-08,1.0
-chr1	5831560	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATA	.	.	END=5831615;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0234766:1,1:1-3,1-3:0,10,0,0:NULL:NULL:87.0303:366.612,131.36:0.339533,0.339533:0.76147,0.231543,0.00702052	0/0:43:0.998937:14,14:9-15,9-15:13,13,0,15:14,13:4,1|5,1|8,3|9,3|11,1|12,1|13,5:282.937:326.675,113.385:1.39944,1.39944:8.61859e-31,0.000348108,0.999652
-chr1	5832533	.	AACAAACAAACA	AACAAACA	.	.	END=5832544;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0412102:2,2:1-3,1-3:0,16,0,0:NULL:NULL:145.95:366.612,131.36:0.587088,0.587088:0.137906,0.489938,0.372325	0/0:34:0.997564:3,3:3-3,3-3:13,21,0,0:3,13:NULL:243.631:326.675,113.385:0.0,0.0:2.98e-43,0.00208502,0.99792
-chr1	5833064	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=5833091;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.0:6,6:6-6,6-6:26,8,0,2:6,26:3,1|5,1:191.71:366.612,131.36:0.0,0.0:1.0,6.68227e-08,0.0	0/0:49:1.00001:7,7:7-7,7-7:23,16,0,10:7,23:3,2|4,2|5,2|6,4:319.451:326.675,113.385:0.0,0.0:0.0,4.69348e-07,1.0
-chr1	5836792	.	TTTTGTTTTGTTTTG	.	.	.	END=5836806;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.0532816:3,3:1-6,1-6:0,14,0,2:NULL:3,2:143.036:366.612,131.36:1.5536,1.5536:2.74641e-16,0.419007,0.581072	0/0:35:1.0:3,3:3-3,3-3:28,4,0,2:3,28:2,1|3,1:161.592:326.675,113.385:0.0,0.0:0.0,8.26137e-09,1.0
-chr1	5843531	.	GTTGTTGTTGTT	GTTGTTGTT	.	.	END=5843542;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.252266:3,3:2-4,2-4:2,17,0,0:3,2:NULL:166.713:366.612,131.36:0.665211,0.665211:0.577122,0.422964,1.17689e-06	0/0:28:0.999906:4,4:4-4,4-4:17,11,0,0:4,17:NULL:166.827:326.675,113.385:0.0,0.0:1.1e-43,6.42646e-05,0.99994
-chr1	5844583	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5844632;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.193242:25,25:22-25,22-25:2,10,0,0:25,2:NULL:100.105:366.612,131.36:1.12192,1.12192:0.0045807,0.480536,0.514971	0/0:34:0.348451:25,25:23-25,23-25:8,10,0,15:24,3|25,5:5,1|6,1|11,2|12,2|13,1|14,1|16,1|18,1|20,3|23,1|24,1:254.626:326.675,113.385:0.561658,0.561658:6.94529e-05,0.630722,0.369266
-chr1	5861282	.	ATATATATATAT	AT	.	.	END=5861293;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.00357437:1,1:1-7,1-7:0,7,0,0:NULL:NULL:64.8289:366.612,131.36:2.00328,2.00328:0.0589627,0.398793,0.542412	0/0:23:0.999911:6,6:6-6,6-6:17,6,0,0:6,17:NULL:118.354:326.675,113.385:0.0,0.0:2.05423e-27,5.61991e-05,0.999947
-chr1	5863544	.	GGGTGGGTGGGT	GGGT	.	.	END=5863555;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.0278135:1,1:3-3,3-3:0,0,0,0:NULL:NULL:-25.0:366.612,131.36:0.0,0.0:0.111169,0.444566,0.444358	0/0:36:0.849824:3,3:3-3,3-3:6,28,0,2:3,6:2,2:289.551:326.675,113.385:0.278639,0.278639:8.24928e-16,0.0757857,0.924308
-chr1	5864371	.	ATTAATTAATTA	ATTAATTAATTAATTA	.	.	END=5864382;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.992643:4,4:4-4,4-4:11,21,0,0:4,11:NULL:235.41:366.612,131.36:0.0,0.0:1.1e-44,0.00467797,0.995334	0/0:26:0.999979:3,3:3-3,3-3:18,8,0,0:3,18:NULL:146.274:326.675,113.385:0.0,0.0:0.0,1.68976e-05,0.999986
-chr1	5865370	.	TCTCTCTCTCTCTC	TCTC	.	.	END=5865383;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0027445:2,2:1-4,1-4:0,6,0,0:NULL:NULL:53.8209:366.612,131.36:0.789724,0.789724:0.0679048,0.427125,0.505172	0/0:33:1.00001:7,7:7-8,7-8:20,8,0,4:7,20:4,1|5,3:182.858:326.675,113.385:0.253975,0.253975:7.068e-42,5.16475e-06,0.999995
-chr1	5868012	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5868059;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.34883:30,30:27-30,27-30:3,9,0,8:30,3:10,1|11,1|15,1|17,1|18,1|25,1|27,2:157.6:366.612,131.36:0.5093,0.5093:0.0,0.0,1.0	0/0:38:0.848199:24,24:22-24,22-24:7,13,0,16:24,7:7,1|9,1|10,1|13,2|14,2|15,3|16,1|21,1|22,1|23,2|24,1:283.199:326.675,113.385:0.467344,0.467344:4.72747e-16,0.0181405,0.9819
-chr1	5871062	.	TATTTTATTTTATTT	.	.	.	END=5871076;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.864268:3,3:3-3,3-3:6,0,0,0:3,6:NULL:23.6225:366.612,131.36:0.0,0.0:1.2182e-18,0.0541899,0.945893	0/0:32:0.999792:3,3:3-3,3-3:15,15,0,2:3,15:2,2:213.109:326.675,113.385:0.0,0.0:3e-45,0.000128777,0.999873
-chr1	5877999	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=5878042;RU=gata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:22:0.950424:12,12:12-13,12-13:9,10,0,2:12,9:3,2:143.371:366.612,131.36:0.469019,0.469019:2.10753e-26,0.0189762,0.981064	1/1:37:0.999836:10,10:10-10,10-10:16,15,0,6:10,16:5,1|7,2|8,1|9,2:251.085:326.675,113.385:0.0,0.0:0.999909,9.38047e-05,6.43078e-23
-chr1	5882501	.	TAAATAAATAAA	.	.	.	END=5882512;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:227.145:366.612,131.36:0.0,0.0:0.0,7.88834e-07,1.0	0/0:46:1.0:3,3:3-3,3-3:36,10,0,0:3,36:NULL:229.319:326.675,113.385:0.0,0.0:0.0,1.04705e-10,1.0
-chr1	5887687	.	AGAATAGAATAGAAT	.	.	.	END=5887701;RU=agaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:21,17,0,0:3,21:NULL:243.932:366.612,131.36:0.0,0.0:0.0,4.85605e-06,0.999995	0/0:41:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:220.324:326.675,113.385:0.0,0.0:0.0,6.13223e-09,1.0
-chr1	5889757	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5889788;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.56051:19,20:18-19,18-21:12,21,0,13:18,4|19,8:5,2|6,1|7,3|13,1|14,1|16,1|18,2|20,2:371.436:366.612,131.36:0.298675,0.638748:0.0,9.94627e-11,1.0	0/0:71:0.995842:16,16:16-17,16-17:26,18,0,25:16,23|17,3:5,1|6,1|7,2|8,1|9,2|10,1|11,4|12,3|13,3|14,4|15,3:487.37:326.675,113.385:0.284901,0.284901:5.44931e-31,2.91005e-07,1.0
-chr1	5890307	.	ACAAAACAAAACAAA	.	.	.	END=5890321;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999566:3,3:3-3,3-3:15,24,0,0:3,15:NULL:282.549:366.612,131.36:0.0,0.0:0.0,0.000391388,0.999613	0/0:37:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:227.577:326.675,113.385:0.0,0.0:0.0,2.32011e-06,1.0
-chr1	5896268	.	TAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=5896295;RU=taga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.620046:11,11:7-11,7-11:4,11,0,5:11,4:8,3|9,1|11,1:157.745:366.612,131.36:1.2298,1.2298:0.0,0.0275314,0.972524	0/0:40:1.00001:7,7:7-7,7-7:22,14,0,4:7,22:3,1|4,1|5,1|6,1:252.308:326.675,113.385:0.0,0.0:2.80159e-28,3.30435e-06,1.0
-chr1	5896295	.	AGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	.	END=5896330;RU=agac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.568114:9,9:8-9,8-9:4,10,0,5:9,4:5,2|6,1|7,2:145.0:366.612,131.36:0.484441,0.484441:4.39201e-09,0.215137,0.784907	0/0:38:0.999706:9,9:9-9,9-9:15,15,0,8:9,15:5,2|6,1|7,3|8,2:261.206:326.675,113.385:0.0,0.0:1.00938e-31,0.000138485,0.999864
-chr1	5897769	.	ATATATATATAT	ATATATATATATAT	.	.	END=5897780;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:1.0:6,7:6-6,6-8:30,25,0,0:6,16|7,11|8,3:NULL:370.665:366.612,131.36:0.0,0.263076:2.2259e-32,1.54871e-13,1.0	0/0:49:0.99999:6,6:6-6,6-6:32,15,0,0:6,29|7,3:NULL:275.497:326.675,113.385:0.0990099,0.0990099:3.05501e-34,1.71758e-08,1.0
-chr1	5897783	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5897826;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.97053:23,23:22-24,22-24:19,23,0,11:22,3|23,14|24,2:4,1|5,1|9,1|10,1|14,1|15,1|19,2|20,1|21,1|22,1:391.072:366.612,131.36:0.701085,0.701085:1.6511e-30,3.98863e-05,0.999963	0/0:66:0.97549:22,22:19-23,19-23:16,22,0,25:22,14|23,2:5,2|6,1|7,3|9,2|10,4|11,3|12,2|13,3|14,2|19,2|21,1:474.739:326.675,113.385:0.657354,0.657354:1.16935e-16,0.000428123,0.999575
-chr1	5897969	.	ACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=5897986;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:49:0.471053:9,10:9-9,8-10:17,18,0,14:8,2|9,15:4,1|6,2|7,1|8,7|9,2|10,1:358.011:366.612,131.36:0.0,0.717122:3.53e-43,4.02365e-06,0.999995	0/0:55:0.944427:9,9:7-19,7-19:29,17,0,8:8,3|9,26:6,4|7,2|8,1|16,1:361.609:326.675,113.385:3.5902,3.5902:1.1e-44,5.74913e-05,0.999942
-chr1	5898251	.	TTGTTGTTGTTG	.	.	.	END=5898262;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:29,10,0,0:4,29:NULL:204.271:366.612,131.36:0.0,0.0:0.0,1.64728e-08,1.0	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:178.491:326.675,113.385:0.0,0.0:0.0,1.01053e-05,0.999993
-chr1	5899946	.	CATACATACATACATACATACATACATACATACATACATA	CATACATACATACATACATACATACATACATACATA	.	.	END=5899985;RU=cata;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.524396:9,9:8-9,8-9:14,12,0,9:8,3|9,11:3,1|5,3|6,1|7,3|8,1:244.737:366.612,131.36:0.481803,0.481803:0.999697,0.000306133,1.72282e-16	0/0:43:0.999909:10,10:10-10,10-10:17,13,0,12:10,17:3,1|4,1|5,2|6,1|7,3|8,3|9,1:279.428:326.675,113.385:0.0990099,0.0990099:2.73826e-25,4.24703e-05,0.999957
-chr1	5899987	.	GTATGTATGTAT	.	.	.	END=5899998;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999084:3,3:3-3,3-3:13,13,0,0:3,13:NULL:172.571:366.612,131.36:0.0,0.0:2.75199e-34,0.000516341,0.999485	0/0:29:1.0:3,3:3-3,3-3:19,10,0,0:3,19:NULL:170.457:326.675,113.385:0.0,0.0:0.0,1.08231e-05,0.999993
-chr1	5902689	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=5902718;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.872688:16,16:12-16,12-16:6,21,0,15:16,6:6,2|8,1|9,3|10,1|11,2|12,1|14,4|15,1:345.735:366.612,131.36:1.43308,1.43308:1.11668e-19,0.0185593,0.981481	0/0:49:0.997902:15,15:13-15,13-15:20,14,0,13:13,2|15,18:4,2|6,1|7,1|8,1|11,2|12,2|13,3|14,1:318.723:326.675,113.385:0.833449,0.833449:1.42274e-22,0.00208513,0.99792
-chr1	5903515	.	TGTTTTGTTTTGTTT	.	.	.	END=5903529;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999941:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.876:366.612,131.36:0.0,0.0:0.0,5.57718e-05,0.999948	0/0:20:0.999876:3,3:3-3,3-3:16,4,0,0:3,16:NULL:103.791:326.675,113.385:0.0,0.0:0.0,6.71815e-05,0.999934
-chr1	5907759	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5907810;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.0838707:25,25:23-26,23-26:0,30,0,12:NULL:4,1|8,1|11,1|14,1|15,1|18,2|21,2|23,1|24,1|25,1:364.098:366.612,131.36:0.655263,0.655263:0.251683,0.543114,0.205209	1/0:58:0.942176:25,26:24-26,25-26:7,26,0,24:25,4|26,3:4,1|5,2|6,1|7,3|8,1|10,1|11,1|12,2|13,2|16,1|19,2|20,1|22,1|23,1|24,1|25,3:460.169:326.675,113.385:0.314035,0.429525:0.0225164,0.950009,0.02757
-chr1	5912141	.	TAAATAAATAAA	.	.	.	END=5912152;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:22,16,0,0:3,22:NULL:237.723:366.612,131.36:0.0,0.0:0.0,3.11145e-06,1.0	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:314.115:326.675,113.385:0.0,0.0:0.0,1.17494e-10,1.0
-chr1	5915677	.	CACCACCACCACCAC	.	.	.	END=5915691;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:93:1.0:5,5:5-5,5-5:61,27,0,4:5,61:3,2|4,2:522.376:366.612,131.36:0.0,0.0:0.0,2.71225e-18,1.0	0/0:95:1.0:5,5:5-5,5-5:75,14,0,5:5,75:4,5:454.381:326.675,113.385:0.0,0.0:0.0,8.44432e-23,1.0
-chr1	5915768	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5915801;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:73:0.780363:20,20:20-21,20-21:34,20,0,18:18,2|19,5|20,22|21,5:4,1|5,1|6,3|9,3|10,1|11,1|12,1|14,1|15,2|16,2|18,2:516.966:366.612,131.36:0.451989,0.451989:0.0,8.05231e-11,1.0	0/0:85:0.999597:17,17:17-22,17-22:41,25,0,17:16,7|17,30|18,4:4,2|8,1|9,2|10,2|12,1|13,3|14,3|16,2|22,1:583.029:326.675,113.385:2.24099,2.24099:5.98141e-35,8.34372e-06,0.999994
-chr1	5918994	.	CCCTCCCTCCCT	.	.	.	END=5919005;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999912:3,3:3-3,3-3:16,13,0,0:3,16:NULL:186.507:366.612,131.36:0.0,0.0:0.0,6.56808e-05,0.999934	0/0:21:0.999354:3,3:3-3,3-3:14,7,0,0:3,14:NULL:117.558:326.675,113.385:0.0,0.0:1e-45,0.00039642,0.999606
-chr1	5919625	.	ATATATATATAT	.	.	.	END=5919636;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999156:6,6:6-6,6-6:14,22,0,0:6,14:NULL:260.754:366.612,131.36:0.0,0.0:2.20629e-24,0.000583008,0.999422	0/0:29:0.999622:6,6:6-7,6-7:15,13,0,0:6,15:NULL:171.564:326.675,113.385:0.195027,0.195027:5.98538e-26,0.000235845,0.999766
-chr1	5919950	.	GATGATGATGAT	.	.	.	END=5919961;RU=gat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999713:4,4:4-4,4-4:16,15,0,0:4,16:NULL:207.353:366.612,131.36:0.0,0.0:1.2002e-40,0.000204791,0.999797	0/0:34:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:196.784:326.675,113.385:0.0,0.0:0.0,8.43741e-07,1.0
-chr1	5922252	.	ATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATAT	.	.	END=5922279;RU=at;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.646279:16,17:16-18,17-18:6,6,0,0:16,2|17,4:NULL:90.1045:366.612,131.36:0.617841,0.304526:3.00658e-13,0.0144617,0.98557	0/0:17:0.620937:14,14:13-15,13-15:5,10,0,0:14,5:NULL:114.364:326.675,113.385:0.421694,0.421694:0.000215381,0.241347,0.758457
-chr1	5926025	.	TCTTTCTTTCTT	.	.	.	END=5926036;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:194.3:366.612,131.36:0.0,0.0:0.0,1.13297e-05,0.999993	0/0:31:0.999998:3,3:3-3,3-3:18,10,0,3:3,18:2,3:188.06:326.675,113.385:0.0,0.0:0.0,1.04438e-05,0.999993
-chr1	5927629	.	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	.	.	END=5927700;RU=gatgaa;PERIOD=6;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:92:0.497956:11,11:10-11,10-11:15,43,0,34:10,2|11,13:2,1|3,1|4,2|5,5|6,6|7,6|8,2|9,6|10,5:718.283:366.612,131.36:0.481803,0.481803:0.999993,1.10196e-05,4.5566e-31	0/0:52:0.844477:12,12:9-12,9-12:6,27,0,19:12,6:2,2|3,3|4,2|5,2|6,1|7,1|8,1|9,4|11,3:411.108:326.675,113.385:0.619742,0.619742:7.03679e-18,0.137528,0.862561
-chr1	5927964	.	ACCCACCCACCC	.	.	.	END=5927975;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:24,20,0,4:3,24:2,4:310.166:366.612,131.36:0.0,0.0:0.0,1.91414e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.966:326.675,113.385:0.0,0.0:0.0,6.46021e-06,0.999995
-chr1	5929823	.	TTTGTTTGTTTG	.	.	.	END=5929834;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,20,0,0:3,29:NULL:296.826:366.612,131.36:0.0,0.0:0.0,9.32122e-09,1.0	0/0:20:0.999841:3,3:3-3,3-3:16,2,0,2:3,16:2,2:98.7639:326.675,113.385:0.0,0.0:0.0,6.37898e-05,0.99994
-chr1	5930224	.	GTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=5930247;RU=gtt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:8,8:8-8,8-8:27,12,0,4:8,27:4,2|5,1|7,1:252.24:366.612,131.36:0.0,0.0:0.0,4.44333e-08,1.0	0/0:46:1.0:8,8:8-8,8-8:27,13,0,5:8,27:3,1|5,4:263.401:326.675,113.385:0.19802,0.19802:0.0,9.0939e-08,1.0
-chr1	5934390	.	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	.	.	END=5934474;RU=tttcc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.301504:14,14:11-14,11-14:2,14,0,21:14,2:3,2|4,2|5,3|6,2|7,2|8,1|9,2|10,3|11,2|12,1|13,1:286.328:366.612,131.36:0.676608,0.676608:0.927216,0.0728785,3.47771e-10	0/0:24:0.199924:17,17:14-17,14-17:2,11,0,11:17,2:3,1|4,2|6,1|9,2|10,3|12,1|13,1:185.373:326.675,113.385:1.49816,1.49816:8.06284e-05,0.626446,0.373523
-chr1	5940366	.	AATTAATTAATT	.	.	.	END=5940377;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999654:3,3:3-3,3-3:15,10,0,0:3,15:NULL:147.578:366.612,131.36:0.0,0.0:0.0,0.000189184,0.999812	0/0:25:0.999916:3,3:3-3,3-3:17,8,0,0:3,17:NULL:143.032:326.675,113.385:0.0,0.0:0.0,5.15884e-05,0.999949
-chr1	5940451	.	TTTGTTTTGTTTTGT	.	.	.	END=5940465;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999994:3,3:3-3,3-3:19,8,0,0:3,19:NULL:147.155:366.612,131.36:0.0,0.0:0.0,1.23806e-05,0.999987	0/0:36:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:215.504:326.675,113.385:0.0,0.0:0.0,1.34636e-06,1.0
-chr1	5941150	.	ACACACACACAC	.	.	.	END=5941161;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:20,15,0,2:6,20:4,1|5,1:232.608:366.612,131.36:0.0,0.0:3.66e-43,3.9473e-06,0.999995	0/0:43:1.0:6,6:6-6,6-6:20,20,0,3:6,20:4,1|5,2:278.91:326.675,113.385:0.0,0.0:5.56e-43,3.98785e-06,0.999995
-chr1	5942017	.	ACAAAACAAAACAAA	.	.	.	END=5942031;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:166.874:366.612,131.36:0.0,0.0:0.0,1.36527e-06,1.0	0/0:20:0.999954:3,3:3-3,3-3:17,1,0,2:3,17:2,1|3,1:90.8318:326.675,113.385:0.0,0.0:0.0,1.14842e-05,0.999988
-chr1	5945567	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5945590;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999936:6,6:5-6,5-6:17,17,0,11:6,17:2,2|3,2|4,4|5,3:307.495:366.612,131.36:0.253975,0.253975:0.0,3.38207e-05,0.99997	0/0:45:1.00001:6,6:6-6,6-6:22,18,0,5:6,22:3,1|4,1|5,3:292.462:326.675,113.385:0.0,0.0:0.0,9.82135e-07,1.0
-chr1	5946795	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5946832;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.472493:22,22:21-22,21-22:12,9,0,11:21,4|22,8:6,1|7,1|8,1|11,2|12,1|13,1|14,1|16,1|20,2:231.246:366.612,131.36:0.489073,0.489073:6.2e-44,7.10627e-05,0.999932	0/0:46:0.991405:19,19:4-21,4-21:14,19,0,9:18,2|19,12:5,1|6,1|7,1|8,1|9,1|10,1|12,1|17,1|19,1:315.022:326.675,113.385:7.29921,7.29921:2.95628e-20,0.00747542,0.992543
-chr1	5947011	.	TCCATCCATCCA	.	.	.	END=5947022;RU=tcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:27,17,0,0:3,27:NULL:260.132:366.612,131.36:0.0,0.0:0.0,3.17725e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:31,11,0,0:3,31:NULL:223.229:326.675,113.385:0.0,0.0:0.0,2.78806e-09,1.0
-chr1	5953047	.	TCATTCATTCATTCAT	.	.	.	END=5953062;RU=tcat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.998895:4,4:3-4,3-4:14,21,0,3:4,14:3,3:275.253:366.612,131.36:0.412766,0.412766:0.0,0.000556861,0.999446	0/0:36:1.00001:4,4:4-4,4-4:22,12,0,2:4,22:3,2:214.53:326.675,113.385:0.0,0.0:0.0,1.25837e-06,1.0
-chr1	5953771	.	ATTTTATTTTATTTT	.	.	.	END=5953785;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:215.118:366.612,131.36:0.0,0.0:0.0,7.59821e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:22,17,0,2:3,22:2,2:259.852:326.675,113.385:0.0,0.0:0.0,1.55559e-06,1.0
-chr1	5956109	.	AGAGAGAGAGAG	.	.	.	END=5956120;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999051:6,6:6-6,6-6:14,17,0,0:6,14:NULL:213.09:366.612,131.36:0.0,0.0:1.35846e-32,0.000674371,0.999331	0/0:37:1.0:6,6:4-6,4-6:19,14,0,2:6,19:4,1|5,1:211.292:326.675,113.385:0.699966,0.699966:1.1e-44,1.05018e-05,0.999993
-chr1	5956842	.	TTCTTTCTTTCT	.	.	.	END=5956853;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:257.7:366.612,131.36:0.0,0.0:0.0,2.2876e-10,1.0	0/0:38:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:236.194:326.675,113.385:0.0,0.0:0.0,2.68644e-06,1.0
-chr1	5958262	.	GAAGGAAGGAAGGAAGGAAG	.	.	.	END=5958281;RU=gaag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:22,15,0,0:5,22:NULL:229.447:366.612,131.36:0.0,0.0:0.0,3.26586e-06,1.0	0/0:47:1.0:5,5:5-5,5-5:27,16,0,4:5,27:2,1|4,3:283.017:326.675,113.385:0.0,0.0:0.0,4.85953e-08,1.0
-chr1	5963266	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=5963305;RU=gttt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:10,10:10-10,10-10:28,19,0,9:10,28:3,1|4,1|5,2|6,2|7,1|8,2:366.047:366.612,131.36:0.0,0.0:0.0,8.63647e-08,1.0	0/0:53:1.0:10,10:10-10,10-10:24,12,0,17:10,24:3,1|4,2|5,3|6,1|8,5|9,5:336.913:326.675,113.385:0.0,0.0:0.0,2.83696e-07,1.0
-chr1	5964606	.	ATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT	.	.	END=5964619;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.886418:12,13:7-13,7-14:14,23,0,0:10,2|11,2|12,4|13,6:NULL:290.803:366.612,131.36:1.66142,1.61043:1.54621e-36,9.18377e-06,0.999993	0/0:27:0.836108:7,7:4-7,4-7:14,10,0,0:6,3|7,11:NULL:160.179:326.675,113.385:0.862467,0.862467:2.47795e-12,0.162866,0.837207
-chr1	5964620	.	ACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC	.	.	END=5964641;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.187232:17,17:11-15,11-15:5,29,0,4:17,5:4,1|8,2|9,1:321.414:366.612,131.36:1.56711,1.56711:4.96889e-16,0.413864,0.58621	0/0:35:0.445205:11,11:9-11,9-11:12,14,0,6:10,3|11,9:4,1|5,1|6,1|9,2|10,1:234.396:326.675,113.385:0.708457,0.708457:2.48055e-09,0.553166,0.44694
-chr1	5969864	.	CCACCCACCCACCCAC	.	.	.	END=5969879;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:4,4:4-4,4-4:33,31,0,3:4,33:2,1|3,2:441.455:366.612,131.36:0.0,0.0:0.0,4.1973e-10,1.0	0/0:57:1.0:4,4:4-4,4-4:33,22,0,2:4,33:3,2:343.641:326.675,113.385:0.0,0.0:0.0,6.62047e-10,1.0
-chr1	5971172	.	TGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTT	.	.	END=5971195;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999887:4,4:4-4,4-4:16,23,0,2:4,16:2,1|3,1:291.383:366.612,131.36:0.0,0.0:0.999985,1.85909e-05,0.0	0/0:49:0.99981:6,6:5-6,5-6:28,17,0,4:5,2|6,26:2,1|3,1|4,1|5,1:310.005:326.675,113.385:0.298675,0.298675:0.0,0.000194253,0.99981
-chr1	5973006	.	ACACACACACAC	ACACACACACACACAC	.	.	END=5973017;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.937908:8,8:7-8,7-8:15,17,0,2:7,2|8,13:6,2:237.838:366.612,131.36:0.40582,0.40582:0.0,8.97946e-05,0.999911	0/0:18:0.983031:6,6:6-6,6-6:9,6,0,3:6,9:5,3:112.405:326.675,113.385:0.0,0.0:3.2648e-20,0.00572335,0.994293
-chr1	5974638	.	AAATAAATAAAT	.	.	.	END=5974649;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.994209:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.3759:366.612,131.36:0.0,0.0:2.8099e-36,0.00287796,0.997132	0/0:22:0.736692:3,3:1-3,1-3:5,17,0,0:3,5:NULL:171.101:326.675,113.385:0.507951,0.507951:1.13701e-16,0.20747,0.792576
-chr1	5974827	.	ATAATAATAATAATAATA	.	.	.	END=5974844;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.949345:6,6:4-6,4-6:8,0,0,2:6,8:3,2:47.1122:366.612,131.36:0.957892,0.957892:8.02138e-18,0.0264945,0.973556	0/0:23:0.996343:6,6:6-6,6-6:11,8,0,4:6,11:3,1|4,2|5,1:152.714:326.675,113.385:0.0,0.0:3.15835e-24,0.00184095,0.998163
-chr1	5974849	.	AAATTAAATTAAATTAAATT	AAATTAAATTAAATT	.	.	END=5974868;RU=aaatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.0334915:3,3:3-4,3-4:0,0,0,2:NULL:3,2:14.0982:366.612,131.36:0.44763,0.44763:0.0669411,0.400408,0.532829	0/0:21:0.964528:4,4:4-4,4-4:8,11,0,2:4,8:2,2:149.833:326.675,113.385:0.19802,0.19802:4.66856e-25,0.0264723,0.973578
-chr1	5976547	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5976566;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997467:4,4:4-4,4-4:12,11,0,2:4,12:3,2:157.502:366.612,131.36:0.0,0.0:1.78561e-39,0.0011616,0.998845	0/0:22:0.993463:4,4:4-4,4-4:10,10,0,2:4,10:3,2:140.83:326.675,113.385:0.0,0.0:3.90347e-33,0.00345787,0.99655
-chr1	5978570	.	AAAGAAAGAAAG	.	.	.	END=5978581;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:30,15,0,2:3,30:2,2:271.734:366.612,131.36:0.0,0.0:0.0,5.8207e-09,1.0	0/0:37:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:187.058:326.675,113.385:0.0,0.0:0.0,1.19858e-08,1.0
-chr1	5981538	.	ATAATAATAATA	.	.	.	END=5981549;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.993889:4,4:4-4,4-4:11,13,0,0:4,11:NULL:163.313:366.612,131.36:0.0,0.0:1.29433e-29,0.00370406,0.996307	0/0:24:0.9988:4,4:4-4,4-4:13,11,0,0:4,13:NULL:148.367:326.675,113.385:0.0,0.0:2.02401e-34,0.000860891,0.999142
-chr1	5990630	.	TGGATTATCTGGATTATCTGGATTATC	TGGATTATC	.	.	END=5990656;RU=tggattatc;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.220125:1,1:1-2,1-2:0,19,0,0:NULL:NULL:165.643:366.612,131.36:0.311527,0.311527:0.586116,0.37447,0.0395355	0/0:42:1.0:3,3:3-3,3-3:22,16,0,4:3,22:2,4:261.29:326.675,113.385:0.0,0.0:0.0,2.32205e-06,1.0
-chr1	5990673	.	ACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5990684;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.322577:20,20:19-20,19-20:2,14,0,6:20,2:4,1|8,2|9,1|12,1|20,1:184.95:366.612,131.36:0.661813,0.661813:0.0,0.0,1.0	0/0:36:1.0:6,6:6-6,6-6:20,13,0,3:6,20:4,1|5,2:222.117:326.675,113.385:0.0,0.0:1.71735e-39,4.97916e-06,0.999995
-chr1	5991174	.	AAAACAAAACAAAAC	AAAAC	.	.	END=5991188;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0600654:1,1:1-3,1-3:0,10,0,0:NULL:NULL:92.4002:366.612,131.36:0.485855,0.485855:0.185855,0.498351,0.315903	0/0:23:0.999999:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.705:326.675,113.385:0.0,0.0:0.0,9.51013e-06,0.999993
-chr1	5999275	.	GGGTGGGTGGGT	GGGT	.	.	END=5999286;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.00981823:1,1:1-2,1-2:0,7,0,0:NULL:NULL:58.3651:366.612,131.36:0.469019,0.469019:0.0380205,0.352752,0.609338	0/0:53:0.932367:3,3:3-3,3-3:7,44,0,2:3,7:2,2:430.394:326.675,113.385:0.278639,0.278639:6.02717e-20,0.0580408,0.942047
-chr1	6002341	.	AAATAAATAAAT	AAAT	.	.	END=6002352;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0846653:1,1:1-1,1-1:0,18,0,0:NULL:NULL:164.799:366.612,131.36:0.139319,0.139319:0.190566,0.5221,0.287427	0/0:14:0.990347:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6385:326.675,113.385:0.0,0.0:9.0193e-33,0.00438464,0.995628
-chr1	6003957	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTG,TTTGTTTG	.	.	END=6003980;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.0340808:1,2:1-3,1-3:0,9,0,0:NULL:NULL:82.4126:366.612,131.36:0.86417,0.863602:0.273918,0.532388,0.193697	0/0:16:0.993524:6,6:6-6,6-6:11,5,0,0:6,11:NULL:89.6854:326.675,113.385:0.0,0.0:5.95831e-34,0.00386801,0.996142
-chr1	6007179	.	TGTGTGTGTGTGTG	.	.	.	END=6007192;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:7,7:7-7,7-7:21,10,0,0:7,21:NULL:175.581:366.612,131.36:0.0990099,0.0990099:6.33055e-39,4.40377e-06,0.999995	0/0:23:0.999991:7,7:7-7,7-7:19,4,0,0:7,19:NULL:113.025:326.675,113.385:0.0,0.0:2.37576e-35,1.83346e-05,0.999985
-chr1	6008813	.	CACACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6008864;RU=ca;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0685445:24,24:21-24,21-24:0,10,0,16:NULL:7,2|9,1|11,2|12,2|14,1|15,1|16,1|20,2|22,1|23,1|24,2:215.675:366.612,131.36:1.34544,1.34544:0.376805,0.480889,0.142383	0/0:24:0.550003:26,26:25-26,25-26:5,10,0,8:26,5:6,1|7,1|8,1|11,3|13,1|16,1:179.894:326.675,113.385:0.35561,0.35561:3.90968e-06,0.288238,0.711762
-chr1	6010711	.	ATTTATTTATTT	.	.	.	END=6010722;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.614864:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6359:366.612,131.36:0.0,0.0:8.92207e-14,0.153957,0.846123	0/0:20:0.999907:3,3:3-3,3-3:16,4,0,0:3,16:NULL:100.387:326.675,113.385:0.0,0.0:0.0,5.41553e-05,0.999948
-chr1	6016751	.	CATACATACATA	.	.	.	END=6016762;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:186.522:366.612,131.36:0.0,0.0:0.0,2.81512e-07,1.0	0/0:20:0.999492:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.222:326.675,113.385:0.0,0.0:0.0,0.000290229,0.999712
-chr1	6022355	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=6022386;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0275954:1,1:1-4,1-4:0,12,0,0:NULL:NULL:111.669:366.612,131.36:0.805213,0.805213:0.541162,0.403616,0.0553774	0/0:59:1.0:8,8:8-8,8-8:24,21,0,12:8,24:3,6|4,1|5,2|6,2|7,1:372.745:326.675,113.385:0.0990099,0.0990099:0.0,5.46256e-07,1.0
-chr1	6023295	.	TTATTTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTAT	.	.	END=6023322;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999751:5,5:5-5,5-5:16,14,0,2:5,16:4,2:209.297:366.612,131.36:0.0,0.0:0.999948,5.54584e-05,1.1957e-41	0/0:28:0.995703:7,7:7-7,7-7:11,11,0,6:7,11:2,2|3,2|5,1|6,1:183.374:326.675,113.385:0.0,0.0:5.7497e-34,0.00238712,0.997618
-chr1	6023967	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=6023984;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.98759:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.337:366.612,131.36:0.0,0.0:3.97564e-34,0.00838731,0.99163	0/0:36:0.999955:3,3:3-3,3-3:18,18,0,0:3,18:NULL:235.55:326.675,113.385:0.0,0.0:0.0,5.44966e-05,0.999948
-chr1	6025872	.	TTTATTTATTTATTTATTTATTTATTTA	TTTATTTATTTATTTATTTATTTA	.	.	END=6025899;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.975625:6,6:5-6,5-6:10,14,0,3:6,10:2,1|3,1|5,1:200.967:366.612,131.36:0.442564,0.442564:0.993257,0.00675705,8.68775e-18	0/0:15:0.961678:7,7:7-7,7-7:8,5,0,2:7,8:3,1|6,1:92.9615:326.675,113.385:0.0,0.0:1.86636e-19,0.0193302,0.980711
-chr1	6025930	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6025961;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:15:0.0335167:23,23:23-26,23-26:0,13,0,0:NULL:NULL:131.818:366.612,131.36:0.917112,0.917112:0.0,0.0,1.0	1/0:16:0.66936:15,16:15-17,16-16:10,1,0,4:15,3|16,7:5,1|11,1|13,1|14,1:90.1498:326.675,113.385:0.59653,0.139319:1.76427e-06,0.672544,0.327468
-chr1	6033005	.	TAAATAAATAAA	.	.	.	END=6033016;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:23,12,0,3:3,23:2,3:225.16:366.612,131.36:0.0,0.0:0.0,6.25145e-07,1.0	0/0:23:0.999932:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.95:326.675,113.385:0.0,0.0:0.0,3.9076e-05,0.999963
-chr1	6033244	.	ATACATACATACATACATACATACATACATACATAC	ATACATACATACATACATACATAC,ATACATACATACATACATACATACATAC	.	.	END=6033279;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.902238:6,7:6-7,7-7:8,20,0,5:6,2|7,6:2,1|3,2|5,2:264.045:366.612,131.36:0.478946,0.0990099:0.999545,0.000455991,4.64201e-20	0/0:18:0.906221:9,9:9-9,9-9:7,8,0,3:9,7:3,1|4,1|7,1:124.6:326.675,113.385:0.29703,0.29703:3.74206e-17,0.0603248,0.939766
-chr1	6033357	.	ATATATATATATATAT	.	.	.	END=6033372;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999213:8,8:8-8,8-8:14,15,0,0:8,14:NULL:202.918:366.612,131.36:0.0,0.0:7.41025e-23,0.000450359,0.999552	0/0:14:0.987169:8,8:8-8,8-8:10,4,0,0:8,10:NULL:77.138:326.675,113.385:0.0,0.0:2.36841e-16,0.00686831,0.99315
-chr1	6034894	.	GGCAGGCAGGCAGGCA	.	.	.	END=6034909;RU=ggca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.990581:4,4:4-4,4-4:11,20,0,0:4,11:NULL:229.918:366.612,131.36:0.0,0.0:5.80723e-36,0.00742497,0.992595	0/0:19:0.967518:4,4:4-4,4-4:8,9,0,2:4,8:3,2:131.181:326.675,113.385:0.0,0.0:2.16302e-26,0.0180274,0.98201
-chr1	6041090	.	AAAATAAAATAAAAT	.	.	.	END=6041104;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999995:3,3:3-3,3-3:20,23,0,0:3,20:NULL:296.664:366.612,131.36:0.0,0.0:0.0,1.48067e-05,0.999987	0/0:52:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:317.917:326.675,113.385:0.0,0.0:0.0,1.53151e-08,1.0
-chr1	6041134	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6041161;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999963:7,7:5-7,5-7:18,17,0,5:7,18:3,1|5,3|6,1:268.322:366.612,131.36:0.597351,0.597351:0.0,3.16593e-05,0.999971	0/0:53:1.0:7,7:7-7,7-7:28,16,0,8:7,28:2,2|3,3|5,1|6,2:317.829:326.675,113.385:0.278639,0.278639:0.0,3.35055e-08,1.0
-chr1	6041922	.	TTGGTTTGGTTTGGTTTGGT	TTGGTTTGGTTTGGTTTGGTTTGGT	.	.	END=6041941;RU=ttggt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999293:5,5:3-5,3-5:13,22,0,6:5,13:2,1|4,4|5,1:295.978:366.612,131.36:0.863148,0.863148:0.0,6.90972e-05,0.999933	0/0:34:1.0:4,4:4-4,4-4:19,10,0,5:4,19:2,4|3,1:200.289:326.675,113.385:0.0,0.0:0.0,7.07621e-06,0.999994
-chr1	6041960	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=6041977;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999493:3,3:3-3,3-3:14,20,0,0:3,14:NULL:236.201:366.612,131.36:0.0,0.0:0.0,0.000392877,0.999607	0/0:27:1.0:3,3:3-3,3-3:23,4,0,0:3,23:NULL:128.968:326.675,113.385:0.0,0.0:0.0,5.73006e-07,1.0
-chr1	6042004	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	.	END=6042038;RU=tttgt;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.161982:7,7:4-7,4-7:2,15,0,0:7,2:NULL:150.298:366.612,131.36:1.38953,1.38953:8.51861e-07,0.69187,0.308144	0/0:34:1.0:7,7:7-7,7-7:19,8,0,7:7,19:2,1|3,1|4,2|5,1|6,1|7,1:201.051:326.675,113.385:0.0,0.0:0.0,4.35751e-06,0.999995
-chr1	6048614	.	AAACAAACAAAC	.	.	.	END=6048625;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:38,7,0,2:3,38:2,2:231.003:366.612,131.36:0.0,0.0:0.0,1.21015e-11,1.0	0/0:27:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:154.817:326.675,113.385:0.0,0.0:0.0,2.35957e-05,0.999979
-chr1	6051144	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=6051171;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.978832:9,9:9-9,9-9:9,9,0,2:9,9:2,1|8,1:134.067:366.612,131.36:0.0,0.0:7e-45,0.00358442,0.996428	0/0:40:1.0:7,7:7-8,7-8:26,7,0,6:7,26:4,1|6,5:217.953:326.675,113.385:0.21692,0.21692:0.0,3.26809e-08,1.0
-chr1	6056382	.	CCTCCTCCTCCTCCT	.	.	.	END=6056396;RU=cct;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998765:5,5:5-5,5-5:13,23,0,0:5,13:NULL:259.972:366.612,131.36:0.0,0.0:3.85917e-38,0.00100599,0.998998	0/0:27:0.98372:5,5:5-5,5-5:10,17,0,0:5,10:NULL:192.524:326.675,113.385:0.0,0.0:3.52835e-29,0.0132492,0.986779
-chr1	6056414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6056441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.990886:7,7:7-7,7-7:10,17,0,2:7,10:5,2:214.125:366.612,131.36:0.0,0.0:6.78826e-30,0.00684723,0.993167	0/0:38:0.997307:7,7:7-7,7-7:11,14,0,13:7,11:3,3|4,1|5,3|6,6:268.22:326.675,113.385:0.0,0.0:5.31752e-33,0.00134459,0.998662
-chr1	6059464	.	AAAAACAAAAACAAAAAC	.	.	.	END=6059481;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:33,25,0,0:3,33:NULL:365.524:366.612,131.36:0.0,0.0:0.0,3.01269e-09,1.0	0/0:44:1.0:3,3:3-3,3-3:28,16,0,0:3,28:NULL:260.005:326.675,113.385:0.0,0.0:0.0,5.9262e-08,1.0
-chr1	6059973	.	AAATAAATAAAT	.	.	.	END=6059984;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:23,21,0,2:3,23:2,2:303.124:366.612,131.36:0.0,0.0:0.0,3.97391e-07,1.0	0/0:24:0.999999:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.651:326.675,113.385:0.0,0.0:0.0,1.0502e-05,0.999993
-chr1	6061243	.	AGAGAGAGAGAG	AGAGAGAG	.	.	END=6061254;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:1.0:4,4:4-4,4-4:20,0,0,0:4,20:NULL:77.6389:366.612,131.36:0.0,0.0:1.0,3.85916e-06,0.0	0/0:44:1.0:6,6:4-6,4-6:26,14,0,3:6,26:5,3:249.986:326.675,113.385:0.339533,0.339533:0.0,6.44112e-08,1.0
-chr1	6062647	.	GTGGGTGGGTGG	.	.	.	END=6062658;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:19,28,0,2:3,19:2,2:337.593:366.612,131.36:0.0,0.0:0.0,6.14054e-06,0.999995	0/0:35:0.997682:3,3:3-3,3-3:12,23,0,0:3,12:NULL:249.551:326.675,113.385:0.0,0.0:5.23451e-40,0.00149923,0.998505
-chr1	6062751	.	TAAATAAATAAA	.	.	.	END=6062762;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999991:3,3:3-3,3-3:18,10,0,0:3,18:NULL:161.93:366.612,131.36:0.0,0.0:0.0,1.2184e-05,0.999987	0/0:16:0.997745:3,3:3-3,3-3:12,4,0,0:3,12:NULL:82.2321:326.675,113.385:0.0,0.0:9.1662e-41,0.00103777,0.998967
-chr1	6066036	.	CTCTGTCTCTGTCTCTGT	CTCTGTCTCTGT	.	.	END=6066053;RU=ctctgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.99997:2,2:2-2,2-2:17,12,0,0:2,17:NULL:176.013:366.612,131.36:0.0,0.0:0.999979,2.31339e-05,5.9961e-40	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.554:326.675,113.385:0.0,0.0:0.0,2.05396e-07,1.0
-chr1	6072915	.	AATAATAATAATAATAATAATAATAATAATAATAATAAT	AATAATAATAATAATAATAATAATAAT,AATAATAATAATAATAATAATAATAATAAT	.	.	END=6072953;RU=aat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:4:0.0671286:9,10:5-11,5-11:0,2,0,2:NULL:8,2:35.2296:366.612,131.36:1.43267,1.53245:1.0,0.0,0.0	0/0:24:0.930029:13,13:12-14,12-14:8,9,0,5:13,8:4,1|5,1|6,2|7,1:152.319:326.675,113.385:0.53502,0.53502:5.64677e-12,0.0433137,0.956757
-chr1	6077184	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6077227;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.892419:24,25:20-24,20-25:7,13,0,0:24,5|25,2:NULL:158.487:366.612,131.36:1.70567,2.21109:5.40504e-17,0.00942569,0.990596	0/0:21:0.755053:22,22:18-22,18-22:6,5,0,8:22,6:6,1|14,2|15,1|17,2|18,1|21,1:133.559:326.675,113.385:1.92222,1.92222:5.48777e-09,0.0867559,0.913343
-chr1	6080857	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=6080876;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999992:4,4:4-4,4-4:18,14,0,3:4,18:2,1|3,2:220.417:366.612,131.36:0.0,0.0:0.999987,1.36199e-05,1.52107e-38	0/0:21:0.976075:5,5:5-5,5-5:8,5,0,8:5,8:2,1|3,2|4,5:135.037:326.675,113.385:0.0,0.0:7.29175e-27,0.00865998,0.991359
-chr1	6083873	.	AATAAATAAATA	AATAAATA	.	.	END=6083884;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:32:0.774856:2,3:2-2,2-3:20,10,0,2:2,18|3,2:2,2:202.804:366.612,131.36:0.0,0.497026:0.225216,0.774819,1.263e-42	0/0:28:0.994711:3,3:3-3,3-3:10,16,0,2:3,10:2,1|3,1:207.602:326.675,113.385:0.0,0.0:3.33485e-40,0.00209673,0.997912
-chr1	6084220	.	ATTTATTTATTT	ATTT	.	.	END=6084231;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.138181:1,1:1-1,1-1:0,15,0,0:NULL:NULL:149.469:366.612,131.36:0.0,0.0:0.260032,0.543367,0.196608	0/0:19:0.998322:3,3:3-3,3-3:13,6,0,0:3,13:NULL:109.814:326.675,113.385:0.0,0.0:1.01883e-32,0.000871197,0.999134
-chr1	6085465	.	TAATAATAATAATAA	TAATAATAATAA	.	.	END=6085479;RU=taa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.98907:4,4:4-4,4-4:10,6,0,0:4,10:NULL:93.322:366.612,131.36:0.0,0.0:0.995439,0.00457339,2.73967e-23	0/0:18:0.996344:5,5:5-5,5-5:12,6,0,0:5,12:NULL:103.466:326.675,113.385:0.0,0.0:8.40892e-32,0.00230582,0.997701
-chr1	6085756	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6085801;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.750683:17,17:16-17,16-17:8,12,0,5:16,2|17,6:7,1|14,2|16,1|17,1:195.426:366.612,131.36:0.35561,0.35561:1.0,0.0,0.0	0/0:29:0.811173:23,23:23-23,23-23:6,13,0,10:23,6:5,1|8,2|10,1|11,2|14,1|19,1|22,2:226.27:326.675,113.385:0.0,0.0:6.11263e-08,0.0622423,0.937851
-chr1	6086268	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6086299;RU=tc;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0130102:23,23:1-23,1-23:0,5,0,2:NULL:15,1|21,1:63.6069:366.612,131.36:8.93866,8.93866:1.83284e-08,0.60832,0.391743	0/0:17:0.86262:16,16:16-16,16-16:6,6,0,5:16,6:4,1|5,1|14,1|15,1|16,1:123.14:326.675,113.385:0.0,0.0:4.58227e-17,0.0297807,0.970274
-chr1	6087008	.	TATTTATTTATT	.	.	.	END=6087019;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998042:3,3:3-3,3-3:12,9,0,0:3,12:NULL:131.045:366.612,131.36:0.0,0.0:2.22887e-39,0.00113631,0.998868	0/0:18:0.999661:3,3:3-3,3-3:15,3,0,0:3,15:NULL:85.7931:326.675,113.385:0.0,0.0:0.0,0.000154233,0.999849
-chr1	6092499	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6092524;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.997822:16,16:15-16,15-16:18,14,0,3:15,2|16,16:7,1|9,1|11,1:246.975:366.612,131.36:0.258566,0.258566:0.0,2.54159e-05,0.999978	0/0:34:0.999858:13,13:13-13,13-13:17,10,0,6:13,17:6,1|7,1|10,2|11,1|13,1:210.266:326.675,113.385:0.19802,0.19802:4.57521e-30,4.70373e-05,0.999955
-chr1	6093013	.	CACACACACACACA	.	.	.	END=6093026;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.396531:7,7:5-7,5-7:3,10,0,0:7,3:NULL:100.647:366.612,131.36:0.404368,0.404368:7.27447e-05,0.406649,0.593349	0/0:14:0.421024:7,7:5-7,5-7:3,9,0,2:7,3:5,2:109.583:326.675,113.385:0.575281,0.575281:6.83108e-05,0.324228,0.675718
-chr1	6098593	.	CTAGAACTAGAACTAGAA	.	.	.	END=6098610;RU=ctagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:172.134:366.612,131.36:0.0,0.0:0.0,1.78548e-05,0.999986	0/0:25:0.999799:3,3:3-3,3-3:15,8,0,2:3,15:2,2:146.151:326.675,113.385:0.0,0.0:0.0,9.13691e-05,0.99991
-chr1	6099223	.	TTGGTTGGTTGG	.	.	.	END=6099234;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.623441:3,3:3-3,3-3:4,2,0,0:3,4:NULL:32.203:366.612,131.36:0.0,0.0:1.71507e-13,0.160163,0.839912	0/0:31:0.999602:3,3:1-3,1-3:15,15,0,0:3,15:NULL:196.668:326.675,113.385:0.913899,0.913899:0.0,0.000276285,0.999727
-chr1	6099488	.	CCCACCCACCCA	.	.	.	END=6099499;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:182.584:366.612,131.36:0.0,0.0:0.0,1.09776e-06,1.0	0/0:31:0.999984:3,3:3-3,3-3:18,13,0,0:3,18:NULL:188.538:326.675,113.385:0.0,0.0:0.0,2.42689e-05,0.999978
-chr1	6099665	.	TTGTTTGTTTGTTTGTTTGTTTGT	TTGTTTGTTTGTTTGTTTGTTTGTTTGT	.	.	END=6099688;RU=ttgt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0649898:7,7:4-7,4-7:0,15,0,5:NULL:4,3|5,1|6,1:172.593:366.612,131.36:0.866209,0.866209:8.74432e-09,0.541024,0.459089	0/0:44:1.0:6,6:6-6,6-6:23,16,0,5:6,23:2,1|3,2|4,1|5,1:276.875:326.675,113.385:0.0,0.0:0.0,1.05494e-06,1.0
-chr1	6102505	.	CAACAACAACAA	.	.	.	END=6102516;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999901:4,4:4-4,4-4:17,12,0,0:4,17:NULL:173.782:366.612,131.36:0.0,0.0:0.0,7.15075e-05,0.999932	0/0:36:0.999977:4,4:4-4,4-4:18,18,0,0:4,18:NULL:228.586:326.675,113.385:0.0,0.0:0.0,3.11281e-05,0.999971
-chr1	6107421	.	AAATAAATAAAT	.	.	.	END=6107432;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:130.232:366.612,131.36:0.0,0.0:0.0,5.2435e-06,0.999995	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.826:326.675,113.385:0.0,0.0:0.0,4.03319e-06,0.999995
-chr1	6108219	.	CACACACACACACACACACACACACACACACACACACA	CA	.	.	END=6108256;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:61:0.993249:19,19:19-20,19-20:25,18,0,18:17,2|19,20|20,3:4,2|5,3|7,1|8,1|9,1|10,1|11,3|13,1|14,2|15,2|18,1:429.764:326.675,113.385:0.29703,0.29703:1.847e-21,6.9518e-05,0.999933
-chr1	6108461	.	AGAGAGAGAGAGAGAG	AG	.	.	END=6108476;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.99941:8,8:8-8,8-8:15,10,0,0:8,15:NULL:150.292:326.675,113.385:0.139319,0.139319:3.98759e-33,0.000372694,0.999629
-chr1	6109390	.	CACCCACCCACC	CACCCACCCACCCACC	.	.	END=6109401;RU=cacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:21:0.0564412:3,4:2-6,2-6:0,21,0,0:NULL:NULL:186.57:366.612,131.36:0.979147,0.985832:0.0502075,0.369433,0.580497	0/0:38:1.0:3,3:2-3,2-3:24,13,0,0:3,24:NULL:212.488:326.675,113.385:0.298675,0.298675:0.0,4.71475e-07,1.0
-chr1	6109799	.	AAATAAATAAAT	AAATAAAT	.	.	END=6109810;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0229253:2,2:1-4,1-4:0,8,0,0:NULL:NULL:79.1816:366.612,131.36:0.723518,0.723518:0.0860922,0.471438,0.442637	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.156:326.675,113.385:0.0,0.0:0.0,1.66408e-07,1.0
-chr1	6109840	.	CAACAACAACAA	CAACAA	.	.	END=6109851;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0171646:2,2:1-3,1-3:0,10,0,0:NULL:NULL:95.4701:366.612,131.36:0.673267,0.673267:0.125553,0.493881,0.380755	0/0:28:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:156.084:326.675,113.385:0.0,0.0:0.0,7.19318e-06,0.999994
-chr1	6110101	.	AAATAAATAAAT	AAAT	.	.	END=6110112;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.114961:1,1:1-3,1-3:0,29,0,0:NULL:NULL:273.872:366.612,131.36:0.984041,0.984041:0.305634,0.506291,0.188084	0/0:19:0.999394:3,3:3-3,3-3:14,5,0,0:3,14:NULL:97.881:326.675,113.385:0.0,0.0:8.52e-43,0.000282072,0.99972
-chr1	6114158	.	AATAAATAAATA	.	.	.	END=6114169;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.808815:3,3:3-3,3-3:5,8,0,0:3,5:NULL:94.8619:366.612,131.36:0.0,0.0:1.67371e-12,0.0870317,0.913069	0/0:12:0.767742:3,3:3-3,3-3:5,7,0,0:3,5:NULL:81.3956:326.675,113.385:0.0,0.0:3.77461e-12,0.127857,0.872242
-chr1	6118166	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6118197;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999744:24,24:22-24,22-24:16,10,0,15:24,16:6,2|7,2|8,1|9,1|12,1|14,1|17,2|19,1|20,1|21,1|23,1|24,1:287.608:366.612,131.36:0.507951,0.507951:0.0,0.0,1.0	0/0:32:0.98645:16,16:16-17,16-17:10,9,0,12:16,10:5,1|6,2|9,1|10,3|12,1|13,1|14,3:227.308:326.675,113.385:0.345543,0.345543:5.24999e-15,0.00639446,0.993618
-chr1	6118512	.	TTCAATTCAATTCAATTCAA	TTCAATTCAATTCAATTCAATTCAA	.	.	END=6118531;RU=ttcaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999993:5,5:5-5,5-5:19,13,0,5:5,19:3,1|4,4:231.825:366.612,131.36:0.0,0.0:0.0,1.00077e-06,1.0	0/0:31:0.99998:4,4:4-4,4-4:18,9,0,4:4,18:3,4:184.02:326.675,113.385:0.0,0.0:0.0,1.38592e-05,0.999987
-chr1	6122082	.	AAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=6122096;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.994947:5,5:5-5,5-5:11,13,0,0:5,11:NULL:162.863:366.612,131.36:0.0,0.0:0.0,0.00154822,0.998458	0/0:33:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:207.671:326.675,113.385:0.0,0.0:0.0,1.27218e-05,0.999987
-chr1	6124347	.	TAAATAAATAAATAAATAAA	TAAA,TAAATAAA	.	.	END=6124366;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0780755:1,2:1-5,1-5:0,20,0,0:NULL:NULL:195.895:366.612,131.36:1.2691,1.27057:0.497749,0.429319,0.072985	0/0:27:1.00001:5,5:5-5,5-5:22,5,0,0:5,22:NULL:138.504:326.675,113.385:0.0,0.0:0.0,1.54925e-06,1.0
-chr1	6126323	.	AATCAATCAATCAATCAATCAATCAATCAATC	AATCAATCAATCAATCAATCAATC	.	.	END=6126354;RU=aatc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.997795:6,6:6-6,6-6:13,14,0,3:6,13:3,3:197.893:366.612,131.36:0.0,0.0:0.999574,0.00043049,1.30887e-36	0/0:25:0.999059:8,8:8-8,8-8:13,5,0,7:8,13:2,1|4,1|5,1|6,2|7,2:152.492:326.675,113.385:0.0,0.0:1.43201e-31,0.000422655,0.999582
-chr1	6130083	.	AAATCAAATCAAATC	.	.	.	END=6130097;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.998496:3,3:3-3,3-3:13,18,0,0:3,13:NULL:224.981:366.612,131.36:0.0,0.0:7.4e-44,0.00115319,0.998853	0/0:23:0.999472:3,3:3-3,3-3:14,9,0,0:3,14:NULL:144.783:326.675,113.385:0.0,0.0:0.0,0.000341248,0.99966
-chr1	6131636	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=6131675;RU=atag;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:10:0.704011:10,10:10-10,10-10:5,5,0,0:10,5:NULL:66.1764:366.612,131.36:0.29703,0.29703:3.54997e-12,0.179667,0.820398	0/0:25:0.984166:10,10:10-10,10-10:9,8,0,8:10,9:2,1|4,1|5,1|7,1|8,1|9,3:173.745:326.675,113.385:0.0,0.0:5.2531e-22,0.00554703,0.994467
-chr1	6132801	.	TTGGTTGGTTGGTTGG	.	.	.	END=6132816;RU=ttgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.948458:4,4:4-4,4-4:8,16,0,0:4,8:NULL:178.262:366.612,131.36:0.0,0.0:5.35741e-27,0.0393248,0.960742	0/0:37:0.999998:4,4:4-4,4-4:18,14,0,5:4,18:2,1|3,4:230.985:326.675,113.385:0.0,0.0:0.0,1.08062e-05,0.999993
-chr1	6133624	.	AAATAAATAAAT	.	.	.	END=6133635;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.962477:3,3:3-3,3-3:8,10,0,0:3,8:NULL:121.6:366.612,131.36:0.0,0.0:2.95185e-25,0.0196238,0.980413	0/0:16:0.994882:3,3:3-3,3-3:11,5,0,0:3,11:NULL:92.3692:326.675,113.385:0.0,0.0:1.38372e-34,0.002219,0.99779
-chr1	6134579	.	AAATAAAATAAAATA	.	.	.	END=6134593;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.993759:3,3:3-3,3-3:11,14,0,0:3,11:NULL:174.422:366.612,131.36:0.0,0.0:1.87619e-36,0.00370717,0.996301	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:177.07:326.675,113.385:0.0,0.0:0.0,4.22136e-06,0.999995
-chr1	6134731	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6134782;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0170447:23,23:1-24,1-24:0,13,0,6:NULL:7,2|12,2|19,1|23,1:173.358:366.612,131.36:7.47154,7.47154:0.845741,0.152508,0.0018332	0/0:33:0.429794:26,26:25-26,25-26:6,18,0,9:25,2|26,4:5,1|6,1|7,1|11,1|12,1|15,1|21,1|26,2:270.245:326.675,113.385:0.472558,0.472558:8.09277e-19,0.522431,0.47766
-chr1	6136631	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6136660;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.482195:20,20:16-20,16-20:4,14,0,0:20,4:NULL:151.317:366.612,131.36:0.913899,0.913899:0.0,0.0,1.0	0/0:48:0.636075:15,15:14-16,14-16:25,16,0,7:13,2|14,6|15,14|16,3:5,1|6,1|8,1|11,1|14,3:338.333:326.675,113.385:0.673122,0.673122:3.52494e-13,0.351759,0.648281
-chr1	6137129	.	TATTATTATTAT	.	.	.	END=6137140;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:26,12,0,0:4,26:NULL:216.068:366.612,131.36:0.0,0.0:0.0,1.37565e-07,1.0	0/0:22:0.999578:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.607:326.675,113.385:0.0,0.0:1.757e-41,0.000238084,0.999765
-chr1	6137380	.	TTGTTTGTTTGT	TTGT	.	.	END=6137391;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.138668:1,1:1-2,1-2:0,23,0,0:NULL:NULL:210.404:366.612,131.36:0.323567,0.323567:0.373728,0.491082,0.135269	0/0:37:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:183.108:326.675,113.385:0.0,0.0:0.0,8.06194e-09,1.0
-chr1	6137986	.	TGCATGCATGCA	.	.	.	END=6137997;RU=tgca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:281.014:366.612,131.36:0.0,0.0:0.0,3.39933e-07,1.0	0/0:18:0.994469:3,3:3-3,3-3:11,7,0,0:3,11:NULL:116.139:326.675,113.385:0.0,0.0:7.27824e-38,0.00322665,0.996784
-chr1	6142183	.	AAACAAACAAACAAAC	AAACAAACAAAC	.	.	END=6142198;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.968282:3,3:3-3,3-3:8,12,0,0:3,8:NULL:141.244:366.612,131.36:0.0,0.0:0.98703,0.0129976,3.1702e-24	0/0:42:1.00001:4,4:4-4,4-4:23,17,0,2:4,23:3,2:263.53:326.675,113.385:0.0,0.0:0.0,9.19229e-07,1.0
-chr1	6144901	.	GAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=6144922;RU=ga;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.983341:8,8:7-8,7-8:10,0,0,0:8,10:NULL:40.7144:366.612,131.36:0.236383,0.236383:0.997944,0.00205975,2.92473e-22	0/0:43:0.999973:11,11:11-11,11-11:25,13,0,4:10,2|11,23:6,1|7,1|10,2:261.614:326.675,113.385:0.0,0.0:1.5765e-36,3.36838e-05,0.99997
-chr1	6153283	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=6153306;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.965536:6,6:6-6,6-6:9,15,0,0:6,9:NULL:174.808:366.612,131.36:0.0,0.0:2.75578e-29,0.0260199,0.974032	0/0:25:0.999981:6,6:6-6,6-6:18,5,0,2:6,18:4,1|5,1:133.222:326.675,113.385:0.0,0.0:0.0,1.21902e-05,0.999987
-chr1	6153696	.	AACTAACTAACT	.	.	.	END=6153707;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999994:3,3:3-3,3-3:19,11,0,0:3,19:NULL:177.198:366.612,131.36:0.0,0.0:0.0,1.20556e-05,0.999987	0/0:14:0.989695:3,3:3-3,3-3:10,4,0,0:3,10:NULL:76.5681:326.675,113.385:0.0,0.0:1.32747e-32,0.00489523,0.995116
-chr1	6156105	.	GGTGGTGGTGGT	.	.	.	END=6156116;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999945:4,4:4-4,4-4:18,13,0,0:4,18:NULL:194.984:366.612,131.36:0.0,0.0:0.0,3.71032e-05,0.999964	0/0:43:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:245.438:326.675,113.385:0.0,0.0:0.0,4.38061e-08,1.0
-chr1	6156235	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=6156254;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999629:6,6:6-6,6-6:14,23,0,4:6,14:2,1|3,1|4,1|5,1:299.189:366.612,131.36:0.0,0.0:0.0,0.00013068,0.999872	0/0:27:0.947843:5,5:5-5,5-5:9,18,0,0:5,9:NULL:205.243:326.675,113.385:0.0,0.0:1.78488e-25,0.0429236,0.957147
-chr1	6157851	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6157890;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.620061:24,25:24-24,24-25:7,8,0,6:24,7:4,1|6,1|9,1|13,1|21,1|25,1:166.354:366.612,131.36:0.0,0.525965:0.0,0.0,1.0	0/0:27:0.752279:20,20:17-20,17-20:12,9,0,5:17,2|20,10:4,1|10,1|11,1|17,1|20,1:183.179:326.675,113.385:1.30783,1.30783:1.61306e-21,0.24328,0.756734
-chr1	6158692	.	AGCAGCAGCAGC	.	.	.	END=6158703;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:30,19,0,0:4,30:NULL:296.539:366.612,131.36:0.0,0.0:0.0,1.30628e-08,1.0	0/0:45:1.0:4,4:4-4,4-4:26,19,0,0:4,26:NULL:279.647:326.675,113.385:0.0,0.0:0.0,1.50567e-07,1.0
-chr1	6158961	.	GTGGTGGTGGTG	.	.	.	END=6158972;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:31,17,0,0:4,31:NULL:274.702:366.612,131.36:0.0,0.0:0.0,4.15691e-09,1.0	0/0:53:1.0:4,4:4-4,4-4:30,21,0,2:4,30:3,2:321.545:326.675,113.385:0.0,0.0:0.0,4.70615e-09,1.0
-chr1	6160096	.	TACATACATACA	.	.	.	END=6160107;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:22,17,0,2:3,22:2,2:257.513:366.612,131.36:0.0,0.0:0.0,1.07318e-06,1.0	0/0:40:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:231.279:326.675,113.385:0.0,0.0:0.0,9.43314e-08,1.0
-chr1	6160598	.	AATAAATAAATA	.	.	.	END=6160609;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999995:3,3:2-3,2-3:19,21,0,0:3,19:NULL:274.628:366.612,131.36:0.323567,0.323567:0.0,1.31913e-05,0.999987	0/0:39:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:225.602:326.675,113.385:0.0,0.0:0.0,3.47456e-07,1.0
-chr1	6162049	.	CCACCACCACCA	.	.	.	END=6162060;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:10:0.988354:4,4:4-4,4-4:10,0,0,0:4,10:NULL:39.0933:366.612,131.36:0.0,0.0:3.00169e-25,0.00586113,0.994152	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:177.09:326.675,113.385:0.0,0.0:0.0,7.64484e-06,0.999994
-chr1	6163104	.	TTTGTTTGTTTG	.	.	.	END=6163115;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:220.902:366.612,131.36:0.0,0.0:0.0,8.27155e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:262.632:326.675,113.385:0.0,0.0:0.0,2.08384e-07,1.0
-chr1	6178405	.	ATAAAATAAAATAAA	.	.	.	END=6178419;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-4,3-4:21,15,0,0:3,21:NULL:219.077:366.612,131.36:0.236383,0.236383:0.0,3.03743e-06,1.0	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:229.543:326.675,113.385:0.0,0.0:0.0,4.18841e-07,1.0
-chr1	6178663	.	GACCTGACCTGACCT	.	.	.	END=6178677;RU=gacct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:28,32,0,0:3,28:NULL:404.545:366.612,131.36:0.0,0.0:0.0,2.97062e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:25,6,0,3:3,25:2,3:175.922:326.675,113.385:0.0,0.0:0.0,1.12569e-07,1.0
-chr1	6180765	.	TAAATAAATAAA	.	.	.	END=6180776;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999829:3,3:3-3,3-3:15,17,0,0:3,15:NULL:211.521:366.612,131.36:0.0,0.0:0.0,0.000125374,0.999879	0/0:14:0.936818:3,3:3-3,3-3:7,5,0,2:3,7:2,2:84.2429:326.675,113.385:0.0,0.0:5.72889e-23,0.0212536,0.978789
-chr1	6188010	.	TTTAATTTAATTTAA	.	.	.	END=6188024;RU=tttaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.838321:3,3:3-3,3-3:6,15,0,0:3,6:NULL:164.825:366.612,131.36:0.0,0.0:1.6313e-19,0.108224,0.891874	0/0:22:0.999711:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.999:326.675,113.385:0.0,0.0:0.0,0.000179156,0.999825
-chr1	6190661	.	AAATAAATAAAT	.	.	.	END=6190672;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:238.529:366.612,131.36:0.0,0.0:0.0,3.31534e-06,1.0	0/0:34:0.999996:3,3:3-3,3-3:19,15,0,0:3,19:NULL:211.052:326.675,113.385:0.0,0.0:0.0,1.27372e-05,0.999987
-chr1	6191823	.	AACAAACAAACA	.	.	.	END=6191834;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.00001:3,3:3-3,3-3:22,24,0,4:3,22:2,4:329.783:366.612,131.36:0.0,0.0:0.0,5.95576e-07,1.0	0/0:31:0.999944:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.552:326.675,113.385:0.0,0.0:0.0,3.98189e-05,0.999963
-chr1	6193268	.	CAACAACAACAACAA	.	.	.	END=6193282;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:5,5:5-5,5-5:26,23,0,0:5,26:NULL:318.943:366.612,131.36:0.0990099,0.0990099:0.0,2.14392e-07,1.0	0/0:34:0.999998:5,5:5-5,5-5:18,13,0,3:5,18:4,3:208.346:326.675,113.385:0.0,0.0:0.0,1.1307e-05,0.999993
-chr1	6194222	.	AACAAAAACAAAAACAAAAACAAA	AACAAAAACAAAAACAAA	.	.	END=6194245;RU=aacaaa;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:217.53:366.612,131.36:0.0,0.0:1.0,2.13012e-06,0.0	0/0:40:1.0:4,4:3-4,3-4:24,8,0,7:4,24:2,1|3,6:217.741:326.675,113.385:0.253975,0.253975:0.0,1.443e-07,1.0
-chr1	6196714	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6196751;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.596831:21,22:20-21,20-22:14,10,0,18:20,4|21,7|22,3:5,1|6,2|8,2|9,1|10,1|11,4|12,1|15,4|16,1|19,1:308.486:366.612,131.36:0.374147,0.769225:3.65542e-38,7.91182e-05,0.999925	0/0:19:0.816281:19,19:18-19,18-19:9,5,0,5:18,2|19,7:6,2|15,2|17,1:128.555:326.675,113.385:0.311527,0.311527:3.19036e-07,0.158704,0.84137
-chr1	6197125	.	GTTTGTTTGTTTGTTT	GTTTGTTTGTTT	.	.	END=6197140;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:3,3:3-3,3-3:29,25,0,0:3,29:NULL:343.468:366.612,131.36:0.0,0.0:1.0,5.40311e-09,0.0	0/0:40:1.0:4,4:4-4,4-4:20,14,0,6:4,20:2,1|3,5:244.8:326.675,113.385:0.0,0.0:2.10572e-29,4.70157e-06,0.999995
-chr1	6197608	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6197647;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0197949:34,34:15-37,15-37:0,12,0,11:NULL:9,1|12,1|13,2|15,2|19,1|28,1|29,1|30,1|34,1:197.621:366.612,131.36:6.74231,6.74231:3.45815e-30,0.143738,0.856344	0/0:48:0.965823:20,20:19-20,19-20:13,18,0,17:19,2|20,11:5,3|9,2|10,2|11,2|12,1|15,1|16,1|18,3|19,2:365.533:326.675,113.385:0.236383,0.236383:1.13737e-10,0.0318096,0.968249
-chr1	6197805	.	CTGCCTCTGCCTCTGCCT	CTGCCTCTGCCT	.	.	END=6197822;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.0:2,2:2-2,2-2:44,2,0,0:2,44:NULL:191.074:366.612,131.36:0.0,0.0:1.0,2.87214e-13,0.0	0/0:57:1.0:3,3:3-3,3-3:39,18,0,0:3,39:NULL:320.576:326.675,113.385:0.0,0.0:0.0,1.62659e-11,1.0
-chr1	6198434	.	CACACACACACACA	.	.	.	END=6198447;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.997258:7,7:6-7,6-7:13,15,0,0:7,13:NULL:190.885:366.612,131.36:0.236383,0.236383:5.4547e-24,0.0019861,0.998019	0/0:30:1.0:7,7:7-7,7-7:25,5,0,0:7,25:NULL:144.648:326.675,113.385:0.0,0.0:3e-45,2.28277e-07,1.0
-chr1	6199733	.	TTATTTATTTAT	.	.	.	END=6199744;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.99552:3,3:3-3,3-3:12,24,0,0:3,12:NULL:279.333:366.612,131.36:0.0,0.0:1.2305e-39,0.00393815,0.996073	0/0:42:1.0:3,3:3-3,3-3:22,17,0,3:3,22:2,3:268.516:326.675,113.385:0.0,0.0:0.0,8.0634e-07,1.0
-chr1	6203219	.	AAACAAACAAAC	.	.	.	END=6203230;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999833:3,3:3-3,3-3:16,24,0,0:3,16:NULL:278.446:366.612,131.36:0.0,0.0:0.0,0.000147499,0.999856	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:183.432:326.675,113.385:0.0,0.0:0.0,2.854e-06,1.0
-chr1	6207701	.	GTTTGTTTGTTT	.	.	.	END=6207712;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999763:3,3:3-3,3-3:15,11,0,0:3,15:NULL:161.819:366.612,131.36:0.0,0.0:3e-45,0.000127729,0.999873	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.425:326.675,113.385:0.0,0.0:0.0,8.11456e-07,1.0
-chr1	6208513	.	GTTGTTGTTGTT	.	.	.	END=6208524;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:25,12,0,0:4,25:NULL:201.525:366.612,131.36:0.0,0.0:0.0,2.75179e-07,1.0	0/0:28:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:151.135:326.675,113.385:0.0,0.0:0.0,9.37241e-06,0.999993
-chr1	6208671	.	TTATTTTTATTTTTATTT	TTATTT	.	.	END=6208688;RU=ttattt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0737831:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.31:366.612,131.36:0.515232,0.515232:0.232985,0.519698,0.247355	0/0:26:0.99963:3,3:3-3,3-3:14,10,0,2:3,14:2,1|3,1:162.315:326.675,113.385:0.0,0.0:0.0,0.000182714,0.999819
-chr1	6210401	.	TTTGTTTGTTTG	.	.	.	END=6210412;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:188.78:366.612,131.36:0.0,0.0:0.0,1.50332e-06,1.0	0/0:20:0.998483:3,3:3-3,3-3:12,5,0,3:3,12:2,3:116.13:326.675,113.385:0.0,0.0:8.19467e-38,0.000558929,0.999445
-chr1	6219473	.	GTTTGTTTGTTTGTTT	.	.	.	END=6219488;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999952:4,4:4-4,4-4:17,15,0,3:4,17:2,1|3,2:231.814:366.612,131.36:0.0,0.0:0.0,2.74888e-05,0.999972	0/0:38:1.0:4,4:4-4,4-4:21,17,0,0:4,21:NULL:254.168:326.675,113.385:0.0,0.0:0.0,7.24935e-06,0.999994
-chr1	6219491	.	ATTTATTTATTT	.	.	.	END=6219502;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:20,21,0,2:3,20:2,2:293.52:366.612,131.36:0.0,0.0:0.0,2.06476e-06,1.0	0/0:45:1.0:3,3:3-3,3-3:25,17,0,3:3,25:2,3:289.229:326.675,113.385:0.0,0.0:0.0,1.11238e-07,1.0
-chr1	6224070	.	GTGTGTGTGTGT	.	.	.	END=6224081;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:6,6:6-6,6-6:21,13,0,2:6,21:4,1|5,1:220.392:366.612,131.36:0.0,0.0:0.0,3.66464e-06,1.0	0/0:33:1.00001:6,6:6-6,6-6:21,10,0,2:6,21:5,2:185.081:326.675,113.385:0.0,0.0:0.0,1.72515e-06,1.0
-chr1	6226500	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6226537;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0298444:35,35:33-36,33-36:0,9,0,2:NULL:29,1|31,1:100.568:366.612,131.36:0.877118,0.877118:0.0,0.0,1.0	0/0:43:0.997486:19,19:18-19,18-19:24,9,0,7:18,5|19,19:6,1|9,1|12,1|13,1|14,1|15,1|18,1:259.282:326.675,113.385:0.5093,0.5093:7.5948e-22,0.00251275,0.997495
-chr1	6226712	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=6226727;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999816:8,8:8-8,8-8:16,11,0,5:8,16:2,1|4,4:204.676:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:45:1.0:4,4:4-4,4-4:24,16,0,5:4,24:2,1|3,4:275.322:326.675,113.385:0.0,0.0:0.0,1.73189e-07,1.0
-chr1	6227414	.	TTGTTTGTTTGT	.	.	.	END=6227425;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,22,0,0:3,23:NULL:289.964:366.612,131.36:0.0,0.0:0.0,3.1637e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:212.816:326.675,113.385:0.0,0.0:0.0,4.12816e-06,0.999995
-chr1	6228918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6228955;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.953211:14,14:12-14,12-14:25,14,0,2:12,2|13,4|14,17|15,2:11,1|14,1:272.748:366.612,131.36:0.495643,0.495643:1.0,0.0,0.0	0/0:21:0.323881:19,19:19-22,19-22:3,6,0,11:19,3:4,1|6,3|11,2|15,2|16,1|18,2:155.522:326.675,113.385:1.40014,1.40014:0.000263973,0.159522,0.840288
-chr1	6229792	.	CAAAACAAAACAAAACAAAACAAAA	CAAAACAAAACAAAACAAAA	.	.	END=6229816;RU=caaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999971:4,4:4-4,4-4:18,16,0,0:4,18:NULL:223.227:366.612,131.36:0.0,0.0:0.999993,1.01201e-05,0.0	0/0:16:0.959818:5,5:5-5,5-5:8,6,0,2:5,8:2,1|3,1:100.318:326.675,113.385:0.0,0.0:1.16675e-24,0.0229229,0.977121
-chr1	6231061	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6231082;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.0552115:13,13:6-15,6-15:0,24,0,9:NULL:5,2|7,1|8,2|10,1|11,2|13,1:297.205:366.612,131.36:2.34668,2.34668:8.57626e-23,0.273988,0.726012	0/0:40:0.999295:11,11:9-12,9-12:22,10,0,6:11,20|12,2:5,1|6,2|9,1|10,2:232.667:326.675,113.385:0.410145,0.410145:5.22495e-29,2.21999e-06,1.0
-chr1	6232825	.	TTTGTTTGTTTG	TTTGTTTG	.	.	END=6232836;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.00001:2,2:2-2,2-2:18,16,0,2:2,18:2,2:229.027:366.612,131.36:0.0,0.0:0.999993,9.95117e-06,0.0	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.983:326.675,113.385:0.0,0.0:0.0,7.29909e-07,1.0
-chr1	6232863	.	TTTGTTTGTTTG	.	.	.	END=6232874;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:23,24,0,0:3,23:NULL:305.213:366.612,131.36:0.0,0.0:0.0,8.45102e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,8,0,3:3,22:2,3:182.425:326.675,113.385:0.0,0.0:0.0,7.23581e-07,1.0
-chr1	6232977	.	CTGCCTCTGCCTCTGCCT	CTGCCTCTGCCTCTGCCTCTGCCT	.	.	END=6232994;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:4,4:4-4,4-4:25,16,0,0:4,25:NULL:248.419:366.612,131.36:0.0,0.0:0.0,2.33065e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:200.399:326.675,113.385:0.0,0.0:0.0,7.36549e-07,1.0
-chr1	6233703	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6233722;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.995376:4,4:4-4,4-4:12,25,0,2:4,12:2,2:292.579:366.612,131.36:0.0,0.0:1.19963e-32,0.003873,0.996135	0/0:25:0.995233:4,4:4-4,4-4:11,11,0,3:4,11:2,1|3,2:169.752:326.675,113.385:0.0,0.0:3.18555e-30,0.00296114,0.997048
-chr1	6236385	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6236434;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.98567:12,12:12-12,12-12:13,19,0,3:11,2|12,11:9,1|11,2:261.163:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/0:31:0.477729:25,25:24-25,24-25:7,14,0,10:24,2|25,5:7,1|9,1|10,1|11,2|16,1|19,2|23,1|24,1:242.309:326.675,113.385:0.452422,0.452422:2.07637e-05,0.478374,0.521694
-chr1	6238596	.	ATTATTATTATT	ATTATTATTATTATT	.	.	END=6238607;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999236:5,5:4-5,4-5:15,16,0,0:5,15:NULL:213.502:366.612,131.36:0.270063,0.270063:0.0,0.000479854,0.999523	0/0:29:0.999393:4,4:4-4,4-4:15,14,0,0:4,15:NULL:194.976:326.675,113.385:0.0,0.0:2.88657e-37,0.000419021,0.999583
-chr1	6239066	.	TTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=6239077;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.271396:4,4:1-4,1-4:2,10,0,0:4,2:NULL:98.8609:366.612,131.36:0.634282,0.634282:1.00093e-11,0.342876,0.657149	0/0:29:0.999785:3,3:3-3,3-3:15,11,0,3:3,15:2,3:182.834:326.675,113.385:0.0,0.0:1.56924e-40,0.00010514,0.999896
-chr1	6240390	.	GTGCGTGCGTGC	GTGC	.	.	END=6240401;RU=gtgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0746064:1,1:1-4,1-4:0,22,0,0:NULL:NULL:201.478:366.612,131.36:0.92647,0.92647:0.230102,0.516179,0.253757	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:173.043:326.675,113.385:0.0,0.0:0.0,6.06587e-06,0.999994
-chr1	6247906	.	TGTTGTTGTTGTTGT	.	.	.	END=6247920;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.00001:5,5:5-5,5-5:22,25,0,0:5,22:NULL:313.808:366.612,131.36:0.0,0.0:0.0,3.09887e-06,1.0	0/0:38:1.0:5,5:4-5,4-5:24,11,0,2:5,24:3,1|4,1:216.699:326.675,113.385:0.236383,0.236383:0.0,4.22916e-07,1.0
-chr1	6250708	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=6250725;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:6,6:6-6,6-6:22,15,0,4:6,22:4,1|5,3:261.781:366.612,131.36:0.0,0.0:0.0,6.02088e-07,1.0	0/0:26:0.999563:6,6:6-6,6-6:15,9,0,2:6,15:3,1|5,1:161.233:326.675,113.385:0.0,0.0:1.7459e-41,0.000263725,0.999736
-chr1	6250858	.	TATGTATGTATGTATG	.	.	.	END=6250873;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:24,21,0,2:4,24:3,2:303.256:366.612,131.36:0.0,0.0:0.0,3.88591e-07,1.0	0/0:32:0.994009:4,4:3-4,3-4:21,9,0,2:3,2|4,19:3,2:192.209:326.675,113.385:0.419363,0.419363:0.0,0.00601312,0.994001
-chr1	6251852	.	AAATAAATAAAT	.	.	.	END=6251863;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:21,19,0,0:3,21:NULL:250.565:366.612,131.36:0.0,0.0:0.0,4.20457e-06,0.999995	0/0:22:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.405:326.675,113.385:0.0,0.0:0.0,6.98634e-05,0.999933
-chr1	6252245	.	ATATATATATATATAT	ATATATATAT	.	.	END=6252260;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.428225:8,8:6-8,6-8:4,13,0,0:8,4:NULL:133.525:366.612,131.36:0.788482,0.788482:2.39144e-06,0.441308,0.558798	1/1:8:0.0176847:5,5:5-9,5-9:0,5,0,0:NULL:NULL:43.6947:326.675,113.385:1.38875,1.38875:0.375284,0.481424,0.14336
-chr1	6252276	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATAT,ATATATATATATATATATATATATATATATATAT	.	.	END=6252315;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.834081:5,5:3-5,3-5:6,8,0,0:5,6:NULL:95.4925:366.612,131.36:0.945117,0.945117:1.0,0.0,0.0	2/2:7:0.0197936:17,17:1-17,1-17:0,4,0,3:NULL:5,1|8,1|17,1:59.9756:326.675,113.385:5.72911,5.72911:0.76738,0.225041,0.00762246
-chr1	6260354	.	TAAATAAATAAA	.	.	.	END=6260365;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:217.602:366.612,131.36:0.0,0.0:0.0,2.08516e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.565:326.675,113.385:0.0,0.0:0.0,1.0302e-05,0.999993
-chr1	6266174	.	TTGTTTTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTT	.	.	END=6266198;RU=ttgtt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.997192:4,4:4-4,4-4:11,16,0,3:4,11:3,3:209.654:366.612,131.36:0.0,0.0:0.99877,0.00123274,1.72179e-30	0/0:29:0.999863:5,5:5-5,5-5:16,9,0,4:5,16:3,4:176.745:326.675,113.385:0.0,0.0:5.2806e-34,0.00010021,0.999902
-chr1	6267793	.	TGTTTGTTTGTT	.	.	.	END=6267804;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.997751:3,3:3-3,3-3:12,9,0,0:3,12:NULL:130.684:366.612,131.36:0.0,0.0:1.30609e-37,0.00086217,0.999142	0/0:39:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.408:326.675,113.385:0.0,0.0:0.0,2.42279e-06,1.0
-chr1	6269522	.	GTTGTTGTTGTT	.	.	.	END=6269533;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999964:4,4:4-4,4-4:18,7,0,0:4,18:NULL:136.356:366.612,131.36:0.0,0.0:0.0,2.879e-05,0.999972	0/0:39:1.00001:4,4:4-4,4-4:22,15,0,2:4,22:3,2:240.943:326.675,113.385:0.0,0.0:0.0,1.42327e-06,1.0
-chr1	6269576	.	GATAGGATAGGATAG	.	.	.	END=6269590;RU=gatag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:156.249:366.612,131.36:0.0,0.0:0.0,8.75009e-06,0.999994	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:218.717:326.675,113.385:0.0,0.0:0.0,7.19534e-08,1.0
-chr1	6271401	.	TCATCATCATCA	.	.	.	END=6271412;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999995:4,4:4-4,4-4:20,13,0,0:4,20:NULL:199.249:366.612,131.36:0.0,0.0:0.0,1.43347e-05,0.999987	0/0:25:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:121.848:326.675,113.385:0.0,0.0:0.0,7.85478e-06,0.999994
-chr1	6273501	.	TTCATTCATTCA	.	.	.	END=6273512;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.998792:3,3:3-3,3-3:13,0,0,0:3,13:NULL:50.7793:366.612,131.36:0.0,0.0:9.4724e-41,0.000490454,0.999514	0/0:19:0.999431:3,3:3-3,3-3:14,5,0,0:3,14:NULL:101.03:326.675,113.385:0.0,0.0:7.8e-44,0.000273069,0.999728
-chr1	6273618	.	ACCCACCCACCC	.	.	.	END=6273629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.76159:3,3:3-3,3-3:5,2,0,0:3,5:NULL:36.5433:366.612,131.36:0.0,0.0:5.11652e-14,0.0983203,0.901783	0/0:21:0.989861:3,3:3-3,3-3:10,11,0,0:3,10:NULL:134.88:326.675,113.385:0.0,0.0:7.59975e-27,0.00483192,0.995182
-chr1	6274375	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=6274394;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:3,2|4,2:171.617:366.612,131.36:0.0,0.0:0.0,1.3935e-06,1.0	0/0:37:1.0:5,5:5-5,5-5:26,7,0,4:5,26:3,1|4,3:196.057:326.675,113.385:0.0,0.0:0.0,4.63645e-08,1.0
-chr1	6276992	.	ATGATGATGATG	.	.	.	END=6277003;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:4,4:4-4,4-4:18,21,0,0:4,18:NULL:258.046:366.612,131.36:0.0,0.0:0.0,4.97124e-05,0.999949	0/0:33:1.00001:4,4:4-4,4-4:22,11,0,0:4,22:NULL:185.686:326.675,113.385:0.0,0.0:0.0,2.22016e-06,1.0
-chr1	6277038	.	AGCAGCAGCAGC	.	.	.	END=6277049;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999636:4,4:4-4,4-4:15,29,0,0:4,15:NULL:321.087:366.612,131.36:0.0,0.0:0.0,0.00034579,0.999658	0/0:33:1.00001:4,4:4-4,4-4:23,10,0,0:4,23:NULL:184.665:326.675,113.385:0.0,0.0:0.0,1.51151e-06,1.0
-chr1	6285646	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6285691;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.931843:25,26:24-25,25-26:10,12,0,14:24,2|25,5|26,3:12,1|13,1|15,3|16,2|19,2|20,1|22,2|25,2:276.338:366.612,131.36:0.240494,0.459304:3.22746e-34,0.000101141,0.999902	0/0:48:0.742702:23,23:22-24,22-24:14,13,0,20:22,3|23,9|24,2:5,2|6,1|7,1|8,1|9,1|12,1|14,1|15,3|16,1|17,3|18,1|21,1|22,1|23,2:352.699:326.675,113.385:0.561134,0.561134:1.89285e-24,0.0129286,0.987098
-chr1	6290853	.	TCCTTCCTTCCT	.	.	.	END=6290864;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999831:3,3:3-3,3-3:17,16,0,0:3,17:NULL:214.565:366.612,131.36:0.0,0.0:0.0,0.000103485,0.999896	0/0:52:1.0:3,3:3-3,3-3:32,20,0,0:3,32:NULL:317.715:326.675,113.385:0.0,0.0:0.0,4.87576e-09,1.0
-chr1	6293821	.	CTCCCTCCCTCC	.	.	.	END=6293832;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:170.023:366.612,131.36:0.0,0.0:0.0,4.76004e-06,0.999995	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:218.038:326.675,113.385:0.0,0.0:0.0,9.94156e-08,1.0
-chr1	6301879	.	AATAAATAAATA	.	.	.	END=6301890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:268.841:366.612,131.36:0.0,0.0:0.0,2.64398e-07,1.0	0/0:42:1.0:3,3:3-3,3-3:23,17,0,2:3,23:2,2:261.177:326.675,113.385:0.0,0.0:0.0,3.68189e-07,1.0
-chr1	6303590	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6303631;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:44:0.937064:25,25:22-25,22-25:14,11,0,18:24,3|25,11:5,1|9,2|10,1|12,2|13,2|14,3|15,1|16,1|18,1|20,1|21,1|22,1|23,1:316.407:366.612,131.36:0.915721,0.915721:0.0,3.48342e-05,0.999964	0/1:52:0.873441:21,23:21-21,20-23:14,13,0,24:20,3|21,9|22,2:4,1|5,1|6,2|7,1|8,1|9,3|10,1|11,2|13,1|15,3|16,2|18,1|19,1|20,3|23,1:393.598:326.675,113.385:0.0990099,1.0187:1.21109e-14,2.029e-06,1.0
-chr1	6311549	.	GGTGGTGGTGGT	.	.	.	END=6311560;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998851:4,4:4-4,4-4:14,11,0,0:4,14:NULL:160.95:366.612,131.36:0.0,0.0:0.0,0.000681921,0.999323	0/0:25:0.999576:4,4:4-4,4-4:15,10,0,0:4,15:NULL:155.49:326.675,113.385:0.0,0.0:0.0,0.000278707,0.999721
-chr1	6312247	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	.	END=6312294;RU=tccc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.0916072:12,12:11-13,11-13:0,16,0,9:NULL:3,1|4,1|6,1|8,1|9,2|10,1|11,2:209.337:366.612,131.36:0.790097,0.790097:0.120643,0.4686,0.410951	0/0:16:0.519107:12,12:11-12,11-12:4,6,0,5:12,4:3,1|4,2|8,1|10,1:109.704:326.675,113.385:0.486863,0.486863:3.2532e-09,0.268059,0.731941
-chr1	6312789	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6312844;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.30309:31,32:28-33,28-33:2,16,0,17:31,2:6,1|12,2|13,1|14,3|16,2|19,1|20,2|21,1|22,2|26,1|32,1:298.451:366.612,131.36:0.815616,0.844549:0.0,0.0,1.0	0/0:28:0.233564:28,28:25-29,25-29:2,11,0,12:28,2:6,1|7,1|8,1|12,1|13,1|14,1|19,1|21,2|26,1|27,1|28,1:211.077:326.675,113.385:1.44649,1.44649:1.4493e-10,0.228072,0.771956
-chr1	6317256	.	AAAAACAAAAACAAAAAC	.	.	.	END=6317273;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:191.254:366.612,131.36:0.0,0.0:0.0,2.07463e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:29,7,0,0:3,29:NULL:180.098:326.675,113.385:0.0,0.0:0.0,1.09115e-08,1.0
-chr1	6324793	.	TTATTTATTTAT	.	.	.	END=6324804;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:237.826:366.612,131.36:0.0,0.0:0.0,7.68292e-08,1.0	0/0:24:0.999899:3,3:3-3,3-3:16,5,0,3:3,16:2,3:131.718:326.675,113.385:0.0,0.0:0.0,3.49466e-05,0.999964
-chr1	6326106	.	CTGCTGCTGCTG	.	.	.	END=6326117;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:25,18,0,0:4,25:NULL:261.316:366.612,131.36:0.0,0.0:0.0,2.9682e-07,1.0	0/0:32:0.999879:4,4:4-4,4-4:17,15,0,0:4,17:NULL:206.579:326.675,113.385:0.0,0.0:0.0,9.01237e-05,0.999911
-chr1	6328025	.	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	.	.	END=6328108;RU=tccctc;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:24:0.323834:5,14:3-13,11-15:2,10,0,11:5,2:2,1|3,1|4,2|5,1|6,1|10,1|11,1|12,1|13,1|14,1:178.554:366.612,131.36:1.80051,1.17184:8.72804e-09,1.0,2.80873e-36	0/0:19:0.276711:14,14:11-14,11-14:2,7,0,10:14,2:2,1|4,1|5,1|6,1|7,2|9,1|10,1|12,1|13,1:148.089:326.675,113.385:0.927845,0.927845:0.00346715,0.435722,0.560919
-chr1	6329503	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6329524;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999981:11,11:10-12,10-12:19,18,0,5:11,19:4,1|9,1|10,3:279.328:366.612,131.36:0.385249,0.385249:1.54556e-29,1.48909e-05,0.999986	0/0:49:0.355466:11,11:10-11,10-11:20,21,0,7:10,5|11,15:4,1|6,1|8,2|10,2|11,1:344.554:326.675,113.385:0.516562,0.516562:1.06726e-25,0.644578,0.355461
-chr1	6330314	.	TGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6330337;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.717376:21,21:19-21,19-21:6,18,0,13:21,6:8,2|11,1|12,2|13,3|16,2|18,1|19,2:296.872:366.612,131.36:0.481599,0.481599:0.0,0.0,1.0	0/0:37:0.999663:12,12:12-12,12-12:16,15,0,4:12,16:7,2|11,2:241.719:326.675,113.385:0.0,0.0:9.40051e-21,0.000149188,0.99985
-chr1	6332594	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=6332633;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.00001:9,9:9-9,9-9:21,18,0,17:9,21:2,1|3,1|4,4|5,3|6,2|7,2|8,4:375.193:366.612,131.36:0.0,0.0:0.0,1.36888e-07,1.0	0/0:39:0.999945:8,8:8-8,8-8:17,12,0,10:8,17:3,2|4,1|5,3|6,2|7,2:256.922:326.675,113.385:0.0,0.0:0.0,3.51892e-05,0.999964
-chr1	6332921	.	TGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=6332940;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999962:5,5:5-5,5-5:18,17,0,0:5,18:NULL:235.869:366.612,131.36:0.0,0.0:0.0,3.68095e-05,0.999964	0/0:31:1.00001:4,4:4-4,4-4:20,7,0,4:4,20:3,4:174.049:326.675,113.385:0.0,0.0:0.0,2.65643e-06,1.0
-chr1	6341827	.	TTTATTTATTTATTTATTTA	.	.	.	END=6341846;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999931:5,5:5-5,5-5:17,13,0,3:5,17:2,1|3,1|4,1:208.003:366.612,131.36:0.0,0.0:0.0,4.02341e-05,0.999963	0/0:31:0.997836:5,5:5-5,5-5:12,11,0,8:5,12:3,3|4,5:204.514:326.675,113.385:0.0,0.0:6.80122e-33,0.000836161,0.999166
-chr1	6345062	.	TATTATTATTATTATTATTATTATTATTAT	.	.	.	END=6345091;RU=tat;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.583909:10,10:9-10,9-10:10,10,0,4:9,2|10,8:5,1|7,1|8,2:173.1:366.612,131.36:0.492866,0.492866:1.20285e-11,0.412318,0.587755	0/0:21:0.71864:10,10:9-10,9-10:11,7,0,3:9,2|10,9:7,3:136.316:326.675,113.385:0.452422,0.452422:3.92122e-13,0.278474,0.721527
-chr1	6347126	.	ATTTATTTATTT	.	.	.	END=6347137;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:30,30,0,0:3,30:NULL:385.253:366.612,131.36:0.0,0.0:0.0,5.45747e-09,1.0	0/0:30:1.00001:3,3:3-4,3-4:21,8,0,0:3,21:NULL:157.025:326.675,113.385:0.21692,0.21692:0.0,2.56255e-06,1.0
-chr1	6348865	.	TTGTTGTTGTTGTTG	.	.	.	END=6348879;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:5,5:5-5,5-5:20,12,0,2:5,20:4,1|5,1:200.063:366.612,131.36:0.0,0.0:0.0,2.3945e-06,1.0	0/0:41:1.0:5,5:5-5,5-5:27,9,0,5:5,27:4,5:225.486:326.675,113.385:0.0,0.0:0.0,1.41317e-08,1.0
-chr1	6354453	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6354502;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.260449:31,37:28-31,28-38:2,10,0,8:31,2:7,1|8,1|12,1|19,1|28,1|29,1|32,1|36,1:170.006:366.612,131.36:1.55707,3.13366:0.0,0.0,1.0	0/0:37:0.614482:25,25:19-25,19-25:8,17,0,10:24,2|25,6:5,2|6,1|7,1|13,1|17,1|19,1|20,2|22,1:280.44:326.675,113.385:2.29536,2.29536:5.97258e-07,0.33895,0.661073
-chr1	6354954	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6354981;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:35:0.0666914:29,36:23-36,27-37:0,18,0,17:NULL:5,1|7,1|8,1|14,1|16,1|17,1|19,1|22,3|23,1|26,1|27,2|28,1|29,1|36,1:297.47:366.612,131.36:4.02078,3.49958:0.0,0.00311768,0.99689	1/0:24:0.801285:13,14:13-14,14-14:12,8,0,4:13,4|14,8:7,1|8,2|11,1:159.248:326.675,113.385:0.494455,0.0:1.73115e-09,0.801783,0.198264
-chr1	6355000	.	AGGCAGGCAGGC	.	.	.	END=6355011;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:170.882:366.612,131.36:0.0,0.0:0.0,6.52171e-06,0.999994	0/0:32:0.999998:3,3:3-3,3-3:18,11,0,3:3,18:2,3:190.865:326.675,113.385:0.0,0.0:0.0,1.01497e-05,0.999993
-chr1	6357634	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6357691;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.00843527:1,1:1-8,1-8:0,13,0,0:NULL:NULL:117.297:366.612,131.36:2.03936,2.03936:0.854868,0.142426,0.00279405	2/2:23:0.132999:28,28:17-29,17-29:2,8,0,11:28,2:5,1|10,1|11,1|13,3|15,1|17,1|20,1|21,2:172.541:326.675,113.385:5.3983,5.3983:0.748314,0.241926,0.00978573
-chr1	6359367	.	CTGCTGCTGCTG	.	.	.	END=6359378;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:4,4:4-4,4-4:37,27,0,0:4,37:NULL:395.923:366.612,131.36:0.0,0.0:0.0,2.29575e-10,1.0	0/0:61:1.0:4,4:4-4,4-4:39,22,0,0:4,39:NULL:362.516:326.675,113.385:0.0,0.0:0.0,4.16911e-11,1.0
-chr1	6368193	.	CATCATCATCAT	.	.	.	END=6368204;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999976:4,4:4-4,4-4:18,7,0,0:4,18:NULL:145.628:366.612,131.36:0.0,0.0:0.0,3.0766e-05,0.999971	0/0:39:1.0:4,4:4-5,4-5:30,8,0,0:4,30:NULL:188.186:326.675,113.385:0.236383,0.236383:0.0,7.14351e-09,1.0
-chr1	6368347	.	TTTATTTATTTATTTATTTA	TTTA,TTTATTTA	.	.	END=6368366;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:19:0.165475:1,2:1-4,1-4:0,19,0,0:NULL:NULL:196.82:366.612,131.36:0.868696,0.813208:0.728826,0.258439,0.0127586	0/0:30:0.997218:5,5:5-5,5-5:12,18,0,0:5,12:NULL:207.885:326.675,113.385:0.0,0.0:1.13771e-33,0.00223835,0.997768
-chr1	6371007	.	AGGTAGGTAGGT	.	.	.	END=6371018;RU=aggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:27,20,0,3:3,27:2,3:310.643:366.612,131.36:0.0,0.0:0.0,5.70152e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:259.845:326.675,113.385:0.0,0.0:0.0,1.20261e-07,1.0
-chr1	6371335	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=6371382;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.578901:9,9:8-10,8-10:9,13,0,3:8,2|9,7:5,1|6,1|7,1:185.232:366.612,131.36:0.598171,0.598171:1.0,0.0,0.0	2/2:4:0.026833:23,23:21-25,21-25:0,3,0,0:NULL:NULL:31.1618:326.675,113.385:0.859164,0.859164:0.231877,0.505364,0.262804
-chr1	6379206	.	AAACAAACAAAC	.	.	.	END=6379217;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:19,15,0,4:3,19:2,4:244.686:366.612,131.36:0.0,0.0:0.0,6.60564e-06,0.999994	0/0:47:1.0:3,3:3-3,3-3:36,11,0,0:3,36:NULL:244.338:326.675,113.385:0.0,0.0:0.0,7.01717e-11,1.0
-chr1	6379384	.	TGTTTTGTTTTGTTT	.	.	.	END=6379398;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999979:3,3:3-3,3-3:18,13,0,0:3,18:NULL:193.535:366.612,131.36:0.0,0.0:0.0,2.71137e-05,0.999972	0/0:29:1.0:3,3:3-3,3-3:19,7,0,3:3,19:2,3:161.935:326.675,113.385:0.0,0.0:0.0,4.73307e-06,0.999995
-chr1	6386715	.	GCCAGCCAGCCA	.	.	.	END=6386726;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:25,17,0,2:3,25:2,2:277.144:366.612,131.36:0.0,0.0:0.0,7.65198e-08,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:170.238:326.675,113.385:0.0,0.0:0.0,2.20524e-06,1.0
-chr1	6389231	.	TGAGAATGAGAATGAGAA	.	.	.	END=6389248;RU=tgagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:33,16,0,2:3,33:2,2:292.834:366.612,131.36:0.0,0.0:0.0,4.11387e-10,1.0	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:227.167:326.675,113.385:0.0,0.0:0.0,1.66007e-06,1.0
-chr1	6390202	.	TATATATATATATATATATATA	TATATATATATATATATATA	.	.	END=6390223;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.999128:10,10:9-10,9-10:15,11,0,0:10,15:NULL:167.229:366.612,131.36:0.195027,0.195027:0.999789,0.000212479,1.24383e-18	0/0:11:0.886395:11,11:11-11,11-11:7,4,0,0:11,7:NULL:68.6352:326.675,113.385:0.0,0.0:7.10004e-08,0.0573829,0.942704
-chr1	6390677	.	ACATACATACATACATACATACATACATACAT	ACATACATACATACATACATACATACATACATACAT	.	.	END=6390708;RU=acat;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:0.786703:8,9:8-9,9-9:12,20,0,24:8,2|9,10:2,1|3,2|4,3|5,4|6,6|7,3|8,5:412.331:366.612,131.36:0.491073,0.0:0.0,2.75677e-05,0.999972	0/0:40:0.999966:8,8:8-8,8-8:18,16,0,6:8,18:3,2|6,2|7,2:261.855:326.675,113.385:0.0,0.0:2.71797e-36,3.02089e-05,0.999971
-chr1	6391128	.	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG	.	.	.	END=6391159;RU=tctg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:0.99995:8,8:8-8,8-8:17,26,0,11:8,17:2,1|3,1|4,2|5,2|6,2|7,3:385.269:366.612,131.36:0.0,0.0:0.0,3.36673e-05,0.99997	0/0:24:0.998722:8,8:8-8,8-8:13,5,0,6:8,13:2,1|3,3|4,1|6,1:142.657:326.675,113.385:0.0,0.0:3.41302e-38,0.000658743,0.999346
-chr1	6391479	.	CAAACAAACAAA	.	.	.	END=6391490;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:23,25,0,3:3,23:2,3:351.872:366.612,131.36:0.0,0.0:0.0,2.91798e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:213.709:326.675,113.385:0.0,0.0:0.0,4.31277e-07,1.0
-chr1	6394101	.	AAAACAAAACAAAAC	.	.	.	END=6394115;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999747:3,3:3-3,3-3:16,17,0,0:3,16:NULL:215.353:366.612,131.36:0.0,0.0:0.0,0.000173326,0.999827	0/0:29:0.999992:3,3:3-3,3-3:18,9,0,2:3,18:2,2:166.137:326.675,113.385:0.0,0.0:0.0,1.259e-05,0.999987
-chr1	6403250	.	TGTTTGTTTGTT	.	.	.	END=6403261;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.996921:3,3:3-3,3-3:12,9,0,0:3,12:NULL:130.745:366.612,131.36:0.0,0.0:7.23095e-40,0.00189695,0.998109	0/0:23:0.998589:3,3:3-3,3-3:12,8,0,3:3,12:2,3:146.182:326.675,113.385:0.0,0.0:1.93543e-40,0.000508567,0.999493
-chr1	6410410	.	CCACCCCCACCCCCACCC	.	.	.	END=6410427;RU=ccaccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999998:3,3:3-3,3-3:21,28,0,4:3,21:2,4:369.966:366.612,131.36:0.0,0.0:0.0,4.48486e-06,0.999995	0/0:37:0.999862:3,3:3-3,3-3:17,20,0,0:3,17:NULL:262.94:326.675,113.385:0.0,0.0:0.0,0.000146166,0.999857
-chr1	6411672	.	CCACCACCACCA	CCACCACCACCACCA	.	.	END=6411683;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.933194:5,5:5-5,5-5:7,19,0,0:5,7:NULL:196.656:366.612,131.36:0.0,0.0:7.30312e-38,0.0317498,0.968307	0/0:24:0.984921:4,4:4-4,4-4:10,14,0,0:4,10:NULL:168.232:326.675,113.385:0.0,0.0:1.06299e-23,0.0104089,0.989612
-chr1	6412880	.	TATGTATGTATG	.	.	.	END=6412891;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:243.736:366.612,131.36:0.0,0.0:0.0,6.45001e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:151.166:326.675,113.385:0.0,0.0:0.0,2.57264e-07,1.0
-chr1	6415172	.	TATATATATATATATATATATA	TATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA	.	.	END=6415193;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:11:0.231832:12,18:12-18,12-18:2,5,0,2:12,2:6,1|17,1:72.2046:366.612,131.36:1.68794,1.37135:3.04941e-11,0.000441063,0.999561	0/0:9:0.571699:11,11:7-11,7-11:5,3,0,0:11,5:NULL:50.6524:326.675,113.385:1.9881,1.9881:5.17558e-08,0.304474,0.695536
-chr1	6417480	.	AGCTGGAGAAGCTGGAGAAGCTGGAGAAGCTGGAGA	.	.	.	END=6417515;RU=agctggaga;PERIOD=9;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999987:4,4:4-4,4-4:19,20,0,3:4,19:2,1|3,2:285.284:366.612,131.36:0.0,0.0:0.0,2.44925e-05,0.999978	0/0:44:0.999971:4,4:4-4,4-4:18,22,0,4:4,18:2,1|3,3:299.858:326.675,113.385:0.0,0.0:0.0,3.82692e-05,0.999963
-chr1	6419181	.	TTCCTTTCCTTTCCT	.	.	.	END=6419195;RU=ttcct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,18,0,2:3,24:2,2:278.409:366.612,131.36:0.0,0.0:0.0,3.33255e-07,1.0	0/0:69:1.0:3,3:3-3,3-3:57,12,0,0:3,57:NULL:335.583:326.675,113.385:0.0,0.0:0.0,4.64831e-17,1.0
-chr1	6419368	.	TCTCTTTCTCTTTCTCTTTCTCTT	.	.	.	END=6419391;RU=tctctt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999994:4,4:4-4,4-4:20,18,0,0:4,20:NULL:245.529:366.612,131.36:0.139319,0.139319:0.0,1.87967e-05,0.999985	0/0:49:1.0:4,4:4-4,4-4:30,13,0,6:4,30:3,6:283.516:326.675,113.385:0.0,0.0:0.0,2.87679e-09,1.0
-chr1	6419434	.	CTCCTCCTCCTCCTCCTCCTC	CTCCTCCTCCTCCTCCTC	.	.	END=6419454;RU=ctc;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.0:6,6:6-6,6-6:26,18,0,5:6,26:3,2|4,2|5,1:306.28:366.612,131.36:0.0,0.0:1.0,9.48715e-08,0.0	0/0:20:0.997097:7,7:3-7,3-7:13,6,0,0:7,13:NULL:113.007:326.675,113.385:1.92721,1.92721:4.64473e-22,0.00220684,0.997799
-chr1	6424394	.	TTGTTGTTGTTG	.	.	.	END=6424405;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999994:4,4:4-4,4-4:19,12,0,0:4,19:NULL:180.0:366.612,131.36:0.0,0.0:0.0,1.33005e-05,0.999987	0/0:26:0.999895:4,4:4-4,4-4:16,8,0,2:4,16:3,2:149.289:326.675,113.385:0.0,0.0:0.0,5.31242e-05,0.999948
-chr1	6427092	.	ATATATATATATATATATATATATAT	AT	.	.	END=6427117;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0172122:1,1:1-3,1-3:0,11,0,0:NULL:NULL:99.9566:366.612,131.36:0.48807,0.48807:0.560778,0.398671,0.0406984	0/0:12:0.373616:13,13:9-13,9-13:9,1,0,0:12,3|13,6:NULL:55.0636:326.675,113.385:1.49816,1.49816:5.54377e-05,0.610766,0.389242
-chr1	6427177	.	ATTTATTTATTTATTT	ATTTATTT	.	.	END=6427192;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0306123:2,2:1-3,1-3:0,11,0,0:NULL:NULL:101.966:366.612,131.36:0.732539,0.732539:0.248395,0.537449,0.214171	0/0:20:0.981664:4,4:4-4,4-4:9,9,0,2:4,9:3,2:132.02:326.675,113.385:0.0,0.0:7.25624e-25,0.00914487,0.990874
-chr1	6441337	.	GCCGCCGCCGCCGCC	GCCGCCGCCGCC	.	.	END=6441351;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:1.0:4,4:4-4,4-4:32,29,0,0:4,32:NULL:391.05:366.612,131.36:0.0,0.0:1.0,5.48193e-10,0.0	0/0:73:1.0:5,5:5-5,5-5:48,22,0,3:5,48:3,2|4,1:418.21:326.675,113.385:0.0,0.0:0.0,3.65892e-14,1.0
-chr1	6441476	.	GCCGGCCGGCCG	.	.	.	END=6441487;RU=gccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:3,3:3-3,3-3:34,26,0,3:3,34:2,3:391.166:366.612,131.36:0.0,0.0:0.0,2.98874e-10,1.0	0/0:86:1.0:3,3:3-3,3-3:39,39,0,8:3,39:2,8:565.491:326.675,113.385:0.0,0.0:0.0,1.5715e-11,1.0
-chr1	6442029	.	AACAACAACAACAACAACAACAACAACAACAACAAC	AACAACAACAACAACAACAACAACAACAACAACAACAAC	.	.	END=6442064;RU=aac;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.868709:13,13:13-13,13-13:6,18,0,0:13,6:NULL:198.809:366.612,131.36:0.0,0.0:2.86275e-18,0.0676645,0.932431	0/0:42:1.0:12,12:12-12,12-12:19,17,0,6:12,19:4,1|6,1|10,2|11,2:285.658:326.675,113.385:0.0,0.0:0.0,7.73598e-06,0.999994
-chr1	6442239	.	TAAGATTGTAAGATTGTAAGATTG	.	.	.	END=6442262;RU=taagattg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,20,0,0:3,24:NULL:278.112:366.612,131.36:0.0,0.0:0.0,1.08989e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:253.768:326.675,113.385:0.0,0.0:0.0,2.23496e-07,1.0
-chr1	6443834	.	GTTGGTTGGTTG	.	.	.	END=6443845;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:216.65:366.612,131.36:0.0,0.0:0.0,1.78562e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:29,4,0,0:3,29:NULL:154.01:326.675,113.385:0.0,0.0:0.0,7.97915e-09,1.0
-chr1	6444502	.	CTGCTGCTGCTG	.	.	.	END=6444513;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:220.241:366.612,131.36:0.0,0.0:0.0,5.32636e-06,0.999995	0/0:34:0.999896:4,4:4-4,4-4:17,17,0,0:4,17:NULL:221.897:326.675,113.385:0.0,0.0:0.0,8.4194e-05,0.999918
-chr1	6445953	.	TATTTTATTTTATTTTATTTTATTT	TATTTTATTTTATTT	.	.	END=6445977;RU=tattt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.986539:3,3:3-3,3-3:10,5,0,0:3,10:NULL:89.0863:366.612,131.36:0.0,0.0:0.996391,0.00361845,7.5186e-31	0/0:15:0.959768:5,5:5-5,5-5:8,5,0,2:5,8:3,1|4,1:94.2959:326.675,113.385:0.0,0.0:1.15631e-17,0.0226392,0.977405
-chr1	6450086	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6450121;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:15:0.251893:15,33:15-20,19-36:5,7,0,2:15,3|19,2:13,1|33,1:116.95:366.612,131.36:2.13292,6.6362:8.74514e-06,0.971979,0.0280665	2/0:29:0.93274:17,18:17-18,18-18:15,6,0,7:17,6|18,9:4,1|5,1|6,1|7,2|10,1|15,1:190.025:326.675,113.385:0.437216,0.0:1.14586e-09,0.932763,0.0673315
-chr1	6453097	.	TTTGTTTGTTTG	.	.	.	END=6453108;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999862:3,3:3-3,3-3:16,13,0,0:3,16:NULL:180.898:366.612,131.36:0.0,0.0:0.0,0.000100186,0.999903	0/0:32:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:174.755:326.675,113.385:0.0,0.0:0.0,1.27653e-06,1.0
-chr1	6454520	.	ATCATCATCATCATC	.	.	.	END=6454534;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:5,5:5-5,5-5:28,24,0,3:5,28:4,3:348.08:366.612,131.36:0.0,0.0:0.0,1.93185e-08,1.0	0/0:50:1.0:5,5:5-5,5-5:31,16,0,3:5,31:4,3:293.005:326.675,113.385:0.0,0.0:0.0,1.47837e-09,1.0
-chr1	6455399	.	AGAAAAGAAAAGAAA	.	.	.	END=6455413;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996704:3,3:3-3,3-3:11,18,0,0:3,11:NULL:208.198:366.612,131.36:0.0,0.0:5.81437e-37,0.00226207,0.997745	0/0:22:0.997507:3,3:3-3,3-3:12,10,0,0:3,12:NULL:142.479:326.675,113.385:0.0,0.0:1.9739e-40,0.00158037,0.998427
-chr1	6456272	.	ACACACACACACACACACACAC	ACACACACACACACACACACACAC	.	.	END=6456293;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:12,12:12-12,12-12:24,20,0,10:12,24:5,3|9,1|11,6:355.119:366.612,131.36:0.0,0.0:0.0,4.39573e-09,1.0	0/0:54:1.0:11,11:11-11,11-11:21,21,0,11:11,21:4,1|5,1|6,3|7,1|8,2|9,1|10,2:368.916:326.675,113.385:0.0,0.0:4.12443e-30,4.83856e-06,0.999995
-chr1	6456451	.	GTGGTGGTGGTGGTG	.	.	.	END=6456465;RU=gtg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:5,5:5-5,5-5:30,15,0,5:5,30:4,5:290.961:366.612,131.36:0.0,0.0:0.0,1.93579e-09,1.0	0/0:56:1.0:5,5:5-5,5-5:38,13,0,5:5,38:4,5:310.504:326.675,113.385:0.0,0.0:0.0,9.48682e-12,1.0
-chr1	6459379	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6459398;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999802:4,4:4-4,4-4:16,5,0,0:4,16:NULL:110.009:366.612,131.36:0.0,0.0:0.0,0.000120563,0.99988	0/0:23:0.999975:4,4:4-4,4-4:18,5,0,0:4,18:NULL:119.271:326.675,113.385:0.0,0.0:0.0,3.32964e-05,0.99997
-chr1	6461977	.	TTTTCTTTTCTTTTC	.	.	.	END=6461991;RU=ttttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999407:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.461:366.612,131.36:0.0,0.0:0.0,0.000331563,0.999673	0/0:32:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:180.804:326.675,113.385:0.0,0.0:0.0,6.43755e-06,0.999995
-chr1	6467447	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	.	END=6467494;RU=agaa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.865652:12,12:12-12,12-12:5,14,0,7:12,5:5,2|8,2|10,1|11,2:202.893:366.612,131.36:0.0,0.0:7.7543e-13,0.0593063,0.940778	0/0:27:0.718776:12,12:9-12,9-12:6,16,0,5:12,6:3,1|4,2|7,1|10,1:220.248:326.675,113.385:0.574428,0.574428:6.58609e-14,0.254121,0.745886
-chr1	6467698	.	CCCTTCCCTTCCCTT	.	.	.	END=6467712;RU=ccctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:3,3:3-3,3-3:17,19,0,3:3,17:2,3:261.031:366.612,131.36:0.0,0.0:0.0,3.89303e-05,0.999963	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:237.557:326.675,113.385:0.0,0.0:0.0,1.90104e-07,1.0
-chr1	6467732	.	TGTGTGTGTGTGTG	.	.	.	END=6467745;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999988:7,7:6-7,6-7:19,24,0,4:7,19:5,1|6,3:323.777:366.612,131.36:0.169767,0.169767:1.22758e-37,8.88063e-06,0.999994	0/0:45:1.0:7,7:7-7,7-7:26,13,0,5:7,26:6,4|7,1:264.22:326.675,113.385:0.0990099,0.0990099:0.0,2.91863e-08,1.0
-chr1	6470121	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6470162;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:52:0.419116:25,25:24-25,24-25:12,20,0,19:24,4|25,8:6,1|7,1|8,1|9,2|10,1|11,1|13,1|15,1|16,3|17,1|20,1|21,1|22,2|24,2:396.669:366.612,131.36:0.491073,0.491073:0.0,1.55313e-05,0.999986	0/1:71:0.984002:21,22:20-21,20-22:16,24,0,31:20,5|21,9|22,2:4,1|5,2|6,2|8,4|9,3|10,1|11,1|13,4|14,2|15,3|16,1|19,3|20,3|22,1:557.227:326.675,113.385:0.390807,0.725277:3.74851e-13,0.00585111,0.994165
-chr1	6474556	.	TTGTTGTTGTTG	.	.	.	END=6474567;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.00001:4,4:4-4,4-4:22,24,0,0:4,22:NULL:309.116:366.612,131.36:0.0,0.0:0.0,2.64898e-06,1.0	0/0:34:1.0:4,4:4-4,4-4:19,13,0,2:4,19:3,2:211.583:326.675,113.385:0.0,0.0:0.0,8.20497e-06,0.999994
-chr1	6479132	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6479171;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.818742:21,21:18-21,18-21:7,18,0,6:21,7:6,1|7,1|9,1|12,1|18,2:244.382:366.612,131.36:1.43581,1.43581:9.04679e-12,0.0961955,0.903909	0/1:36:0.701656:20,21:19-20,19-21:11,16,0,9:19,3|20,5|21,3:7,2|8,2|9,1|10,1|15,1|18,1|19,1:281.897:326.675,113.385:0.425627,0.791708:2.93234e-06,0.159303,0.84077
-chr1	6481961	.	AATAAATAAATA	.	.	.	END=6481972;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999864:3,3:3-3,3-3:16,8,0,0:3,16:NULL:135.705:366.612,131.36:0.0,0.0:0.0,6.6863e-05,0.999934	0/0:35:0.999832:3,3:3-3,3-3:16,19,0,0:3,16:NULL:233.09:326.675,113.385:0.0,0.0:0.0,0.000120095,0.999881
-chr1	6485320	.	AATTTAATTTAATTT	.	.	.	END=6485334;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998443:3,3:3-3,3-3:13,15,0,0:3,13:NULL:191.214:366.612,131.36:0.0,0.0:3.21756e-38,0.00108093,0.998922	0/0:19:0.988664:3,3:3-3,3-3:10,9,0,0:3,10:NULL:122.733:326.675,113.385:0.0,0.0:2.01741e-29,0.0065498,0.993466
-chr1	6485835	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6485900;RU=tc;PERIOD=2;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:33:0.296222:31,31:30-32,30-32:2,17,0,12:31,2:6,1|7,1|11,1|13,2|20,1|22,1|23,1|26,1|27,1|29,1|30,1:262.25:366.612,131.36:0.696174,0.696174:0.758903,0.240269,0.000848255	1/1:28:0.0592474:30,30:29-33,29-33:0,16,0,10:NULL:7,1|8,1|10,1|13,1|20,1|25,2|26,1|27,1|30,1:233.514:326.675,113.385:1.16057,1.16057:0.424781,0.462446,0.112889
-chr1	6486465	.	ATAATAATAATAATAATA	ATAATAATAATAATA	.	.	END=6486482;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.00001:5,5:5-5,5-5:22,15,0,0:5,22:NULL:226.929:366.612,131.36:0.0,0.0:1.0,1.61118e-06,1.10998e-39	0/0:31:0.848806:6,6:5-7,5-7:14,16,0,0:6,12|7,2:NULL:212.196:326.675,113.385:0.573403,0.573403:4.96e-21,0.00105893,0.998945
-chr1	6486709	.	GAGGTAGAGGTAGAGGTA	.	.	.	END=6486726;RU=gaggta;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:82:1.0:3,3:3-3,3-3:31,51,0,0:3,31:NULL:573.653:366.612,131.36:0.0,0.0:0.0,2.10299e-08,1.0	0/0:64:1.0:3,3:3-3,3-3:26,38,0,0:3,26:NULL:437.551:326.675,113.385:0.0,0.0:0.0,3.27061e-07,1.0
-chr1	6489307	.	AACCAACCAACCAACCAACCAACCAACCAACC	AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC	.	.	END=6489338;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.25467:13,13:11-13,11-13:2,7,0,2:13,2:4,1|9,1:89.9995:366.612,131.36:0.634282,0.634282:0.0,0.0,1.0	0/0:35:0.999807:8,8:8-8,8-8:16,14,0,5:8,16:2,1|3,1|4,1|7,2:234.493:326.675,113.385:0.0,0.0:9.71125e-37,0.000126954,0.999873
-chr1	6497659	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6497698;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:52:0.427282:22,25:22-22,19-26:10,26,0,13:22,10:5,1|6,1|11,2|12,2|14,1|15,2|18,3|25,1:396.318:366.612,131.36:0.29703,1.7353:6.86936e-27,4.79342e-07,1.0	0/0:54:0.961433:20,20:18-20,18-20:15,22,0,15:19,3|20,12:4,1|5,1|11,2|12,2|14,1|15,3|16,1|17,1|18,2|19,1:397.666:326.675,113.385:0.694341,0.694341:2.62129e-12,0.0371701,0.962893
-chr1	6507213	.	GGCAGGCAGGCA	.	.	.	END=6507224;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:0.999988:3,3:3-3,3-3:20,54,0,0:3,20:NULL:564.517:366.612,131.36:0.0,0.0:0.0,2.21705e-05,0.999979	0/0:66:1.0:3,3:3-3,3-3:19,41,0,6:3,19:2,6:480.663:326.675,113.385:0.0,0.0:0.0,5.54561e-06,0.999995
-chr1	6507332	.	CACACACACACACACA	CACACACACACA	.	.	END=6507347;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.238502:6,6:3-6,3-6:2,29,0,0:6,2:NULL:276.117:366.612,131.36:1.17884,1.17884:0.890963,0.109137,2.63841e-08	0/0:29:0.217846:8,8:5-8,5-8:2,27,0,0:8,2:NULL:258.606:326.675,113.385:1.2144,1.2144:0.000712133,0.468084,0.531312
-chr1	6507470	.	GTTGTTGTTGTT	.	.	.	END=6507481;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:68:1.0:4,4:4-4,4-4:40,22,0,4:4,40:3,4:391.267:366.612,131.36:0.0,0.0:0.0,2.86979e-12,1.0	0/0:42:1.0:4,4:4-4,4-4:30,9,0,3:4,30:3,3:232.787:326.675,113.385:0.0,0.0:0.0,3.9359e-09,1.0
-chr1	6509128	.	AAGAAAGAAAGA	.	.	.	END=6509139;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:27,23,0,0:3,27:NULL:320.759:366.612,131.36:0.0,0.0:0.0,5.62015e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:223.052:326.675,113.385:0.0,0.0:0.0,5.27716e-08,1.0
-chr1	6509313	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6509338;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:49:0.997491:17,17:13-17,13-17:17,15,0,15:16,2|17,15:5,1|6,4|7,1|8,1|12,1|13,1|14,1|16,5:333.024:366.612,131.36:0.974229,0.974229:0.0,6.11081e-07,1.0	0/1:32:0.646039:13,14:13-13,13-14:11,15,0,5:13,11:8,2|9,1|10,1|14,1:229.145:326.675,113.385:0.0,0.484441:2.72351e-19,9.01106e-08,1.0
-chr1	6509599	.	AAAAGAAAAGAAAAG	.	.	.	END=6509613;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999935:3,3:3-3,3-3:16,15,0,4:3,16:2,4:228.976:366.612,131.36:0.0,0.0:0.0,4.68756e-05,0.999956	0/0:26:0.999312:3,3:3-3,3-3:14,12,0,0:3,14:NULL:169.371:326.675,113.385:0.0,0.0:0.0,0.000471465,0.99953
-chr1	6513189	.	ACAAGTACAAGTACAAGT	ACAAGT	.	.	END=6513206;RU=acaagt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0778033:1,1:1-3,1-3:0,14,0,0:NULL:NULL:127.912:366.612,131.36:0.916684,0.916684:0.198352,0.51361,0.288123	0/0:28:0.999984:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.592:326.675,113.385:0.0,0.0:0.0,2.41846e-05,0.999978
-chr1	6519516	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC	.	.	END=6519555;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.326169:10,17:10-10,10-17:11,24,0,4:9,2|10,9:9,1|10,1|14,2:315.968:366.612,131.36:0.0,2.45293:1.0,0.0,0.0	0/0:35:0.811379:20,20:19-21,19-21:17,10,0,8:19,4|20,11|21,2:6,1|12,1|14,1|15,1|17,2|18,1|19,1:246.071:326.675,113.385:0.635209,0.635209:2.88909e-13,0.0495004,0.95058
-chr1	6519558	.	GTGTGTGTGTGTGTGTGT	GTGTGTGT	.	.	END=6519575;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.935555:4,4:4-5,4-5:8,24,0,0:4,8:NULL:254.948:366.612,131.36:0.469019,0.469019:1.0,0.0,0.0	0/0:24:0.999881:9,9:9-9,9-9:17,6,0,0:9,17:NULL:122.476:326.675,113.385:0.139319,0.139319:8.45691e-32,6.95839e-05,0.999933
-chr1	6520061	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=6520095;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:40:0.348329:5,7:5-5,5-8:22,10,0,8:5,22:3,3|5,1|7,4:251.551:366.612,131.36:0.0,0.516183:1.00958e-24,1.0,0.0	0/0:40:1.0:7,7:7-7,7-7:20,11,0,8:7,20:2,1|3,3|4,1|5,2|6,1:237.78:326.675,113.385:0.139319,0.139319:0.0,4.5035e-06,0.999995
-chr1	6520115	.	AACCAACCAACC	.	.	.	END=6520126;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.842359:3,3:3-3,3-3:6,9,0,0:3,6:NULL:104.041:366.612,131.36:0.0,0.0:8.02858e-22,0.0840801,0.916017	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.892:326.675,113.385:0.0,0.0:0.0,5.40295e-07,1.0
-chr1	6525229	.	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=6525264;RU=aaac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.0:7,7:7-7,7-7:27,13,0,4:7,27:3,1|6,3:259.229:366.612,131.36:0.0,0.0:1.0,2.10771e-08,0.0	0/0:41:1.0:9,9:9-9,9-9:19,15,0,7:9,19:3,1|4,2|5,1|6,1|8,2:266.151:326.675,113.385:0.0,0.0:0.0,8.39e-06,0.999994
-chr1	6525468	.	TGTGTGTGTGTGTGTG	.	.	.	END=6525483;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999729:8,8:8-8,8-8:15,20,0,5:8,15:6,4|7,1:286.139:366.612,131.36:0.0990099,0.0990099:4.7596e-28,0.000115341,0.999887	0/0:43:0.994747:8,8:7-8,7-8:29,10,0,4:7,4|8,25:4,1|5,2|7,1:253.989:326.675,113.385:0.419363,0.419363:4.07905e-40,0.00526366,0.994747
-chr1	6530019	.	AATTAATTAATT	.	.	.	END=6530030;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.92595:3,3:3-3,3-3:7,21,0,0:3,7:NULL:218.027:366.612,131.36:0.0,0.0:4.4995e-23,0.050793,0.949288	0/0:14:0.932457:3,3:3-3,3-3:7,7,0,0:3,7:NULL:92.1075:326.675,113.385:0.0,0.0:3.16866e-23,0.0352042,0.96486
-chr1	6540303	.	CAAAAACAAAAACAAAAA	.	.	.	END=6540320;RU=caaaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,19,0,3:3,23:2,3:280.557:366.612,131.36:0.0,0.0:0.0,2.94168e-07,1.0	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.404:326.675,113.385:0.0,0.0:0.0,1.50693e-06,1.0
-chr1	6542023	.	GTTTTGTTTTGTTTT	GTTTT	.	.	END=6542037;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0706208:1,1:1-4,1-4:0,12,0,0:NULL:NULL:111.332:366.612,131.36:1.20962,1.20962:0.24805,0.510238,0.241734	0/0:21:0.999747:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.451:326.675,113.385:0.0,0.0:0.0,0.000141988,0.999858
-chr1	6542152	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	END=6542199;RU=ttcc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:39:0.998437:11,12:11-11,9-12:7,20,0,12:11,5|12,2:2,1|3,2|4,2|5,4|6,2|8,1:306.906:366.612,131.36:0.0,0.705267:0.00121235,0.998792,2.93932e-09	0/0:21:0.996639:12,12:11-12,11-12:12,4,0,4:12,12:6,2|7,1|10,1:118.65:326.675,113.385:0.390807,0.390807:3.18866e-31,0.00190421,0.998102
-chr1	6549122	.	TATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATA	.	.	END=6549165;RU=ta;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:17:0.17645:19,19:17-19,17-19:2,11,0,4:19,2:4,1|5,1|8,1|17,1:144.179:366.612,131.36:0.542842,0.542842:0.871083,0.128396,0.000618529	1/3:11:0.028408:1,21:1-23,1-23:0,9,0,2:NULL:17,1|21,1:99.7489:326.675,113.385:8.54168,5.05515:0.263481,0.69884,0.0377403
-chr1	6555095	.	GTTGTTGTTGTT	.	.	.	END=6555106;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:24,20,0,0:4,24:NULL:282.923:366.612,131.36:0.0,0.0:0.0,1.12807e-06,1.0	0/0:43:1.0:4,4:4-4,4-4:30,11,0,2:4,30:3,2:230.61:326.675,113.385:0.0,0.0:0.0,4.15857e-09,1.0
-chr1	6557207	.	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	.	.	END=6557281;RU=ttc;PERIOD=3;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0444653:28,28:1-28,1-28:0,13,0,8:NULL:6,1|11,1|14,1|16,1|24,1|25,1|27,2:178.898:366.612,131.36:6.79896,6.79896:2.57014e-23,0.496631,0.503384	0/0:28:0.676758:25,25:25-25,25-25:5,7,0,16:25,5:3,2|4,1|9,1|10,1|12,1|14,3|15,1|16,1|17,2|20,1|22,1|23,1:208.385:326.675,113.385:0.0,0.0:2.55374e-08,0.150502,0.849579
-chr1	6558796	.	GGGTGGGTGGGT	.	.	.	END=6558807;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992568:3,3:3-3,3-3:10,12,0,0:3,10:NULL:147.84:366.612,131.36:0.0,0.0:1.03052e-29,0.00436478,0.995644	0/0:26:0.982124:3,3:3-3,3-3:9,17,0,0:3,9:NULL:193.248:326.675,113.385:0.0,0.0:1.17708e-26,0.0114446,0.988582
-chr1	6573728	.	TGTTTGTTTGTTTGTT	.	.	.	END=6573743;RU=tgtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:29,14,0,0:4,29:NULL:246.303:366.612,131.36:0.0,0.0:0.0,1.95774e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:24,8,0,0:4,24:NULL:166.086:326.675,113.385:0.0,0.0:0.0,4.58797e-07,1.0
-chr1	6574488	.	TATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=6574515;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999898:9,9:9-9,9-9:16,11,0,3:9,16:7,1|8,2:194.239:366.612,131.36:0.0990099,0.0990099:0.0,9.4853e-06,0.999993	0/0:30:0.999572:7,7:7-7,7-7:14,9,0,7:7,14:2,1|3,2|5,2|6,2:187.963:326.675,113.385:0.0,0.0:1.16039e-33,0.000195257,0.999805
-chr1	6575450	.	TTTATTTATTTATTTA	.	.	.	END=6575465;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:26,8,0,0:4,26:NULL:175.847:366.612,131.36:0.0,0.0:0.0,1.47876e-07,1.0	0/0:29:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:151.885:326.675,113.385:0.0,0.0:0.0,2.16543e-06,1.0
-chr1	6579057	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT	.	.	END=6579090;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:1.0:10,10:10-10,10-10:32,16,0,4:9,2|10,30:5,1|8,1|9,2:311.614:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:40:0.952174:17,17:16-18,16-18:15,12,0,12:16,3|17,12:5,1|9,1|10,1|11,2|12,2|14,1|15,3|16,1:284.142:326.675,113.385:0.382183,0.382183:4.47207e-14,0.0474327,0.952644
-chr1	6581899	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6581934;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.0409144:18,18:16-19,16-19:0,5,0,7:NULL:5,2|8,1|14,1|15,1|16,1|17,1:102.022:366.612,131.36:2.04575,2.04575:0.143728,0.552506,0.303883	1/0:23:0.741081:17,18:16-18,16-18:4,10,0,8:17,2|18,2:5,1|11,2|13,2|14,1|16,1|17,1:178.74:326.675,113.385:0.5634,0.711908:0.0240193,0.808404,0.167687
-chr1	6582216	.	TTTTGTTTTGTTTTG	.	.	.	END=6582230;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999709:3,3:3-3,3-3:15,6,0,0:3,15:NULL:115.111:366.612,131.36:0.0,0.0:0.0,0.000175043,0.999827	0/0:24:0.999727:3,3:3-3,3-3:15,9,0,0:3,15:NULL:141.616:326.675,113.385:0.0,0.0:0.0,0.000159982,0.999842
-chr1	6589837	.	AATGAATGAATG	.	.	.	END=6589848;RU=aatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:2-3,2-3:25,7,0,0:3,25:NULL:162.414:366.612,131.36:0.169767,0.169767:0.0,1.1825e-07,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:210.49:326.675,113.385:0.0,0.0:0.0,2.6585e-06,1.0
-chr1	6589908	.	AGTCAGTCAGTC	.	.	.	END=6589919;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999868:3,3:3-3,3-3:16,17,0,0:3,16:NULL:212.311:366.612,131.36:0.0,0.0:0.0,7.16104e-05,0.999932	0/0:45:1.0:3,3:3-3,3-3:22,21,0,2:3,22:2,2:286.925:326.675,113.385:0.0,0.0:0.0,6.81537e-07,1.0
-chr1	6591632	.	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	.	.	END=6591681;RU=ttcct;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:20:1.0:7,10:7-7,10-10:9,7,0,4:7,5|10,4:3,2|5,1|6,1:133.243:366.612,131.36:0.29703,0.0:8.67611e-10,1.0,2.09003e-09	0/0:28:0.970062:10,10:10-10,10-10:8,10,0,10:10,8:2,1|4,1|5,1|6,3|7,2|8,1|10,1:193.083:326.675,113.385:0.0,0.0:1.12305e-28,0.0144447,0.985586
-chr1	6591950	.	TCCTTTCCTTTCCTTTCCTT	.	.	.	END=6591969;RU=tcctt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.576692:4,4:4-4,4-4:4,2,0,0:4,4:NULL:32.3285:366.612,131.36:0.29703,0.29703:1.45405e-12,0.214419,0.785623	0/0:26:1.00001:4,4:4-4,4-4:23,1,0,2:4,23:2,1|3,1:113.988:326.675,113.385:0.0,0.0:0.0,4.22388e-07,1.0
-chr1	6598126	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6598147;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999831:11,11:11-11,11-11:17,12,0,2:11,17:6,1|8,1:193.141:366.612,131.36:0.0,0.0:6.30627e-27,0.000104113,0.999896	0/0:32:0.99526:11,11:10-11,10-11:17,12,0,3:10,2|11,15:6,1|7,1|8,1:215.682:326.675,113.385:0.195027,0.195027:7.28222e-22,0.00466829,0.995342
-chr1	6601383	.	TGTGTGTGTGTG	.	.	.	END=6601394;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999591:6,6:5-6,5-6:15,18,0,0:6,15:NULL:219.972:366.612,131.36:0.437216,0.437216:4.48063e-35,0.000300498,0.999704	0/0:34:1.00001:6,6:6-6,6-6:22,7,0,5:6,22:5,5:192.526:326.675,113.385:0.0,0.0:0.0,6.67475e-07,1.0
-chr1	6601485	.	AGGGAGGGAGGG	.	.	.	END=6601496;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:23,10,0,0:3,23:NULL:177.924:366.612,131.36:0.0,0.0:0.0,5.48719e-07,1.0	0/0:45:1.0:3,3:3-3,3-3:27,16,0,2:3,27:2,2:260.68:326.675,113.385:0.0,0.0:0.0,2.88615e-08,1.0
-chr1	6602519	.	TTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTATTA	.	.	END=6602545;RU=tta;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0356188:12,12:1-12,1-12:0,9,0,5:NULL:4,1|5,1|6,1|10,1|11,1:119.866:366.612,131.36:3.31696,3.31696:1.68215e-15,0.498435,0.501573	0/0:28:0.50064:9,9:8-9,8-9:15,8,0,5:8,3|9,12:3,1|5,1|6,1|7,1|8,1:177.338:326.675,113.385:0.472558,0.472558:4.96969e-19,0.499154,0.500847
-chr1	6626511	.	ACCCACCCACCC	.	.	.	END=6626522;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999187:3,3:3-3,3-3:13,19,0,0:3,13:NULL:223.009:366.612,131.36:0.0,0.0:4.387e-42,0.000474992,0.999529	0/0:51:1.00001:3,3:3-3,3-3:22,29,0,0:3,22:NULL:342.245:326.675,113.385:0.0,0.0:0.0,2.41659e-06,1.0
-chr1	6633217	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6633244;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.878848:15,15:13-16,13-16:17,19,0,12:13,2|15,12|16,3:5,3|6,4|9,1|10,1|14,3:359.766:366.612,131.36:0.751302,0.751302:1.4e-44,0.00210048,0.997905	0/0:51:1.0:14,14:14-14,14-14:26,16,0,9:14,26:5,1|6,1|7,2|8,2|9,1|10,1|13,1:333.577:326.675,113.385:0.0,0.0:5.2809e-28,3.76402e-07,1.0
-chr1	6635223	.	AGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6635246;RU=agga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.868967:12,12:9-12,9-12:8,29,0,12:12,8:4,3|6,2|7,2|8,1|9,3|10,1:399.905:366.612,131.36:0.727436,0.727436:0.0,0.0,1.0	0/0:50:1.0:6,6:6-6,6-6:22,23,0,5:6,22:3,2|4,1|5,2:338.493:326.675,113.385:0.0,0.0:0.0,1.79946e-06,1.0
-chr1	6637761	.	AAAACAAAACAAAAC	.	.	.	END=6637775;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:189.748:366.612,131.36:0.0,0.0:0.0,2.94786e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:19,9,0,2:3,19:2,1|3,1:177.292:326.675,113.385:0.0,0.0:0.0,4.63746e-06,0.999995
-chr1	6639022	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=6639049;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:54:0.99161:16,17:16-16,16-17:18,28,0,8:15,2|16,14|17,2:5,2|6,2|7,1|9,1|11,1|17,1:407.064:366.612,131.36:0.0,0.437216:2.0971e-39,2.13905e-10,1.0	0/0:77:0.981574:14,14:13-14,13-14:24,35,0,16:13,5|14,19:5,3|7,1|8,3|9,1|10,4|12,2|13,2:555.047:326.675,113.385:0.345543,0.345543:3.88947e-19,0.0184703,0.98157
-chr1	6650989	.	ACACACACACACACACAC	.	.	.	END=6651006;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:9,9:9-9,9-9:20,20,0,7:9,20:5,1|7,2|8,4:316.391:366.612,131.36:0.0990099,0.0990099:1.13195e-34,6.36215e-06,0.999994	0/0:38:0.999539:9,9:8-9,8-9:20,9,0,8:8,2|9,18:6,1|7,1|8,5|9,1:235.415:326.675,113.385:0.294378,0.294378:9.34017e-37,0.000476681,0.999523
-chr1	6652069	.	AATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	END=6652100;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.99999:7,9:7-7,7-9:21,13,0,2:7,15|8,2|9,4:5,1|8,1:250.151:366.612,131.36:0.0,0.45372:1.27709e-14,1.0,2.06024e-20	0/0:37:1.0:8,8:8-8,8-8:24,9,0,4:8,24:4,1|7,3:214.106:326.675,113.385:0.0,0.0:0.0,1.95385e-07,1.0
-chr1	6653054	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=6653073;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.00001:6,6:6-6,6-6:21,18,0,6:6,21:2,1|4,2|5,3:290.798:366.612,131.36:0.0,0.0:0.0,3.94884e-07,1.0	0/0:52:1.0:5,5:4-5,4-5:27,19,0,5:5,27:3,2|4,3:316.099:326.675,113.385:0.169767,0.169767:0.0,2.97714e-08,1.0
-chr1	6660614	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6660633;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999553:5,5:5-5,5-5:14,13,0,2:5,14:2,1|3,1:191.696:366.612,131.36:0.0,0.0:0.0,0.00022762,0.999774	0/0:29:0.999755:5,5:5-5,5-5:15,12,0,2:5,15:3,2:181.981:326.675,113.385:0.0,0.0:0.0,0.000150829,0.99985
-chr1	6661173	.	GTTTTGTTTTGTTTT	GTTTTGTTTTGTTTTGTTTT	.	.	END=6661187;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.995835:4,4:4-4,4-4:12,8,0,0:4,12:NULL:121.767:366.612,131.36:0.0,0.0:0.0,0.00236118,0.997647	0/0:32:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,2:183.986:326.675,113.385:0.0,0.0:0.0,3.33869e-06,1.0
-chr1	6662622	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6662661;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.997073:16,16:16-16,16-16:13,3,0,0:16,13:NULL:80.8523:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/2:42:0.286442:20,25:20-20,12-26:15,9,0,16:19,2|20,13:5,1|6,1|10,1|11,2|12,1|13,1|14,1|15,3|16,2|19,1|23,1|25,1:288.356:326.675,113.385:0.0,4.65993:6.93767e-25,5.20978e-13,1.0
-chr1	6663558	.	CTGCTGCTGCTG	.	.	.	END=6663569;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.577703:4,4:4-4,4-4:4,2,0,0:4,4:NULL:35.0695:366.612,131.36:0.0,0.0:2.88725e-11,0.234658,0.765367	0/0:63:1.0:4,4:4-4,4-4:34,27,0,2:4,34:3,2:402.862:326.675,113.385:0.0,0.0:0.0,3.71134e-10,1.0
-chr1	6664650	.	TATGTATGTATG	TATG	.	.	END=6664661;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:144.866:326.675,113.385:0.0,0.0:0.0,4.62343e-07,1.0
-chr1	6666335	.	TCCCTCCCTCCC	.	.	.	END=6666346;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:244.895:366.612,131.36:0.0,0.0:0.0,1.21091e-07,1.0	0/0:54:1.0:3,3:3-3,3-3:29,22,0,3:3,29:2,3:335.04:326.675,113.385:0.0,0.0:0.0,7.12479e-09,1.0
-chr1	6666349	.	TCTTTCTTTCTT	.	.	.	END=6666360;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00002:3,3:3-8,3-8:20,15,0,0:3,20:NULL:215.496:366.612,131.36:2.46433,2.46433:0.0,7.47024e-06,0.999994	0/0:51:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:300.283:326.675,113.385:0.0,0.0:0.0,1.5381e-09,1.0
-chr1	6666375	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6666390;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.996825:17,18:17-17,15-18:12,14,0,9:17,10|18,2:9,2|10,1|14,1|15,2|16,1|17,1|18,1:263.472:366.612,131.36:0.19802,0.8516:0.0,0.0,1.0	0/0:51:1.0:8,8:8-8,8-8:26,19,0,5:8,26:4,1|6,2|7,2:317.137:326.675,113.385:0.0,0.0:2.8061e-41,8.445e-08,1.0
-chr1	6671371	.	AAGAAAGAAAGAAAGA	.	.	.	END=6671386;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999854:4,4:3-4,3-4:16,13,0,0:4,16:NULL:181.48:366.612,131.36:0.236383,0.236383:0.0,0.00011318,0.999888	0/0:22:0.998983:4,4:4-4,4-4:14,8,0,0:4,14:NULL:134.801:326.675,113.385:0.0,0.0:2.455e-42,0.000664496,0.999339
-chr1	6673316	.	AAACAAACAAAC	.	.	.	END=6673327;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999999:3,3:3-3,3-3:19,6,0,0:3,19:NULL:126.548:366.612,131.36:0.0,0.0:0.0,9.74928e-06,0.999993	0/0:52:1.0:3,3:3-3,3-3:31,21,0,0:3,31:NULL:317.693:326.675,113.385:0.0,0.0:0.0,1.1136e-08,1.0
-chr1	6674435	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=6674462;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.316825:16,16:14-16,14-16:12,15,0,0:14,2|15,2|16,8:NULL:198.567:366.612,131.36:0.840244,0.840244:8.33851e-25,0.0022144,0.997791	0/0:54:0.993236:14,14:13-14,13-14:26,23,0,5:13,6|14,20:5,3|6,2:376.116:326.675,113.385:0.323567,0.323567:4.66391e-23,0.00678172,0.993234
-chr1	6680517	.	TGGGTGGGTGGG	.	.	.	END=6680528;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:189.462:366.612,131.36:0.0,0.0:0.0,3.00271e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:263.257:326.675,113.385:0.0,0.0:0.0,3.35788e-07,1.0
-chr1	6684271	.	ACAAACAAACAAACAA	.	.	.	END=6684286;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:228.612:366.612,131.36:0.0,0.0:0.0,5.85672e-06,0.999995	0/0:33:0.999992:4,4:4-4,4-4:18,9,0,6:4,18:3,6:196.145:326.675,113.385:0.0,0.0:0.0,1.14496e-05,0.999988
-chr1	6690576	.	TATATATATATA	.	.	.	END=6690587;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.975685:6,6:6-6,6-6:9,0,0,0:6,9:NULL:35.4976:366.612,131.36:0.0,0.0:3.9678e-15,0.0124883,0.987536	0/0:21:0.999204:6,6:6-6,6-6:14,7,0,0:6,14:NULL:125.106:326.675,113.385:0.0,0.0:7.2177e-23,0.000535469,0.999469
-chr1	6703494	.	TATATATATATATATATATATATATATA	TATATATATATATATATATATATATA	.	.	END=6703521;RU=ta;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.968492:13,13:13-13,13-13:9,9,0,3:13,9:8,1|10,1|13,1:146.856:366.612,131.36:0.139319,0.139319:0.982443,0.0175961,1.6944e-08	0/0:10:0.479794:14,14:14-14,14-14:4,6,0,0:14,4:NULL:71.5921:326.675,113.385:0.417958,0.417958:0.00029151,0.284597,0.715118
-chr1	6711923	.	CAAACAAACAAACAAA	.	.	.	END=6711938;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999782:4,4:4-4,4-4:15,22,0,2:4,15:2,1|3,1:285.144:366.612,131.36:0.0,0.0:2.09e-43,0.000166085,0.999835	0/0:36:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:181.384:326.675,113.385:0.0,0.0:0.0,3.89179e-08,1.0
-chr1	6713866	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6713917;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.221703:14,14:10-14,10-14:3,15,0,0:14,3:NULL:153.06:366.612,131.36:1.2177,1.2177:1.0,0.0,0.0	0/2:43:0.987703:26,27:21-26,21-28:13,15,0,12:25,2|26,9|27,2:5,1|6,1|13,2|14,1|15,1|21,1|23,3|24,1|27,1:300.289:326.675,113.385:0.973827,1.47541:6.51093e-19,1.9854e-05,0.99998
-chr1	6713993	.	TGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6714004;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.221145:6,6:3-6,3-6:2,13,0,0:6,2:NULL:129.107:366.612,131.36:0.991188,0.991188:6.73945e-05,0.532693,0.467348	0/1:62:0.284611:6,18:6-6,6-21:43,16,0,3:6,43:11,1|13,1|18,1:369.866:326.675,113.385:0.0,5.2541:0.0,5.92463e-21,1.0
-chr1	6716659	.	TTTCTTTCTTTC	.	.	.	END=6716670;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999993:3,3:3-3,3-3:18,20,0,2:3,18:2,2:265.082:366.612,131.36:0.0,0.0:0.0,1.79637e-05,0.999985	0/0:47:1.0:3,3:3-3,3-3:31,11,0,5:3,31:2,5:260.567:326.675,113.385:0.0,0.0:0.0,1.18079e-09,1.0
-chr1	6720277	.	ACATACATACAT	.	.	.	END=6720288;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:268.077:366.612,131.36:0.0,0.0:0.0,9.24506e-08,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.205:326.675,113.385:0.0,0.0:0.0,1.36787e-06,1.0
-chr1	6721062	.	CACACACACACA	.	.	.	END=6721073;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:19,12,0,6:6,19:4,1|5,5:235.048:366.612,131.36:0.0,0.0:8.662e-41,4.90018e-06,0.999995	0/0:34:0.999993:6,6:6-6,6-6:19,15,0,0:6,19:NULL:208.771:326.675,113.385:0.0,0.0:8.8628e-41,1.658e-05,0.999986
-chr1	6721105	.	TTTTGTTTTGTTTTG	.	.	.	END=6721119;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:198.723:366.612,131.36:0.0,0.0:0.0,1.695e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:32,6,0,3:3,32:2,3:204.171:326.675,113.385:0.0,0.0:0.0,5.65962e-10,1.0
-chr1	6722604	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=6722663;RU=ttttg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.998215:8,8:8-8,8-8:12,17,0,8:8,12:2,1|4,2|5,1|6,1|7,3:260.566:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:46:0.999287:12,12:12-12,12-12:13,15,0,18:12,13:3,1|4,2|5,4|6,1|7,1|8,3|9,2|11,4:320.81:326.675,113.385:0.0,0.0:1.50531e-38,0.000313811,0.999689
-chr1	6723584	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6723621;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:36:0.99981:19,23:19-23,23-24:7,16,0,11:19,3|23,4:4,1|6,1|13,3|15,1|17,2|18,1|22,2:268.49:366.612,131.36:1.01068,0.195027:2.2591e-26,0.000132187,0.999871	1/0:39:0.994947:18,19:18-20,19-19:14,11,0,13:18,4|19,10:6,1|8,1|9,2|10,2|14,2|15,2|16,2|18,1:273.883:326.675,113.385:0.540307,0.0:1.55211e-10,0.99495,0.0050625
-chr1	6728597	.	TTTCTTTCTTTC	.	.	.	END=6728608;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999538:3,3:3-3,3-3:14,9,0,0:3,14:NULL:133.683:366.612,131.36:0.0,0.0:0.0,0.000243385,0.999758	0/0:34:1.0:3,3:3-3,3-3:27,5,0,2:3,27:2,2:166.45:326.675,113.385:0.0,0.0:0.0,2.15002e-08,1.0
-chr1	6730348	.	TGGGTGGGTGGGTGGG	.	.	.	END=6730363;RU=tggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999531:4,4:4-4,4-4:15,27,0,0:4,15:NULL:301.947:366.612,131.36:0.0,0.0:0.0,0.000389541,0.999613	0/0:47:0.999845:4,4:4-4,4-4:16,29,0,2:4,16:3,2:341.888:326.675,113.385:0.0,0.0:0.0,0.000106812,0.999895
-chr1	6730422	.	TGCTTTGCTTTGCTT	.	.	.	END=6730436;RU=tgctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:33,20,0,0:3,33:NULL:310.714:366.612,131.36:0.0,0.0:0.0,7.62851e-10,1.0	0/0:69:1.0:3,3:3-3,3-3:54,10,0,5:3,54:2,5:341.071:326.675,113.385:0.0,0.0:0.0,1.7461e-16,1.0
-chr1	6734369	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=6734401;RU=ttg;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.980074:15,15:14-15,14-15:15,13,0,18:14,2|15,13:5,1|7,2|8,1|9,4|11,2|12,2|13,1|14,4|15,1:325.514:366.612,131.36:0.334882,0.334882:0.0,0.0,1.0	0/0:50:1.00001:11,11:11-11,11-11:20,16,0,14:11,20:3,1|4,1|5,2|6,2|7,2|8,1|9,2|10,3:341.701:326.675,113.385:0.0,0.0:3.28e-43,3.46465e-06,1.0
-chr1	6735467	.	AATCAATCAATC	.	.	.	END=6735478;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:3,3:2-3,2-3:20,8,0,0:3,20:NULL:153.232:366.612,131.36:0.36513,0.36513:0.0,3.69551e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:218.448:326.675,113.385:0.0,0.0:0.0,5.86043e-06,0.999995
-chr1	6736982	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6737025;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.609566:19,20:19-19,19-20:8,10,0,13:19,8:5,2|7,2|9,1|10,1|11,1|14,2|17,1|18,2|20,1:236.394:366.612,131.36:0.0,0.40582:0.75266,0.24735,4.34393e-15	0/0:43:0.903804:22,22:21-23,21-23:16,12,0,14:21,3|22,11|23,2:6,1|7,1|8,1|9,1|10,3|11,1|15,1|19,1|20,2|22,2:305.424:326.675,113.385:0.559734,0.559734:1.7949e-27,0.00514933,0.994866
-chr1	6740766	.	GTTTGTTTGTTTGTTT	.	.	.	END=6740781;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999991:4,4:4-4,4-4:19,15,0,2:4,19:3,2:228.062:366.612,131.36:0.0,0.0:0.0,1.52551e-05,0.999986	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:228.081:326.675,113.385:0.0,0.0:0.0,4.35477e-07,1.0
-chr1	6745472	.	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6745495;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.975726:6,6:5-6,5-6:19,23,0,9:5,2|6,17:2,2|3,2|4,1|5,4:362.099:366.612,131.36:0.419363,0.419363:0.0,0.0243312,0.975718	0/0:36:1.00001:6,6:3-6,3-6:21,8,0,6:6,21:2,1|3,1|4,2|5,2:198.513:326.675,113.385:0.934582,0.934582:0.0,1.88575e-06,1.0
-chr1	6748758	.	AAACAAACAAACAAAC	.	.	.	END=6748773;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,16,0,0:4,21:NULL:228.863:366.612,131.36:0.0,0.0:0.0,3.67721e-06,1.0	0/0:45:1.0:4,4:4-4,4-4:26,13,0,6:4,26:2,1|3,5:263.236:326.675,113.385:0.0,0.0:0.0,4.99948e-08,1.0
-chr1	6749336	.	GTTTGTTTGTTT	.	.	.	END=6749347;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.995381:3,3:3-3,3-3:11,10,0,0:3,11:NULL:133.595:366.612,131.36:0.0,0.0:6.29787e-37,0.00205199,0.997952	0/0:21:0.999856:3,3:3-3,3-3:16,5,0,0:3,16:NULL:109.32:326.675,113.385:0.0,0.0:0.0,6.8238e-05,0.999933
-chr1	6751150	.	AAAAGAAAAGAAAAG	AAAAG	.	.	END=6751164;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.108428:1,1:1-2,1-2:0,18,0,0:NULL:NULL:174.121:366.612,131.36:0.536301,0.536301:0.385972,0.49367,0.120449	0/0:35:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.154:326.675,113.385:0.0,0.0:0.0,9.84342e-06,0.999993
-chr1	6752073	.	TATCTATCTATC	.	.	.	END=6752084;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:2-3,2-3:30,27,0,2:3,30:2,2:374.491:366.612,131.36:0.236383,0.236383:0.0,5.52036e-09,1.0	0/0:41:1.0:3,3:3-3,3-3:27,12,0,2:3,27:2,2:228.917:326.675,113.385:0.0,0.0:0.0,2.1434e-08,1.0
-chr1	6752139	.	TTGTTGTTGTTG	.	.	.	END=6752150;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:32,23,0,0:4,32:NULL:334.176:366.612,131.36:0.0,0.0:0.0,4.61281e-09,1.0	0/0:39:1.00001:4,4:4-4,4-4:22,14,0,3:4,22:3,3:234.628:326.675,113.385:0.0,0.0:0.0,7.82498e-07,1.0
-chr1	6752213	.	AAACAAACAAAC	.	.	.	END=6752224;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:261.678:366.612,131.36:0.0,0.0:0.0,2.98266e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:27,11,0,2:3,27:2,2:222.519:326.675,113.385:0.0,0.0:0.0,2.70935e-08,1.0
-chr1	6754429	.	TTTGTTTTGTTTTGT	TTTGT	.	.	END=6754443;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0942719:1,1:1-3,1-3:0,14,0,0:NULL:NULL:133.774:366.612,131.36:0.8516,0.8516:0.236528,0.507018,0.256493	0/0:30:0.999998:3,3:3-3,3-3:18,9,0,3:3,18:2,3:174.936:326.675,113.385:0.0,0.0:0.0,9.15557e-06,0.999993
-chr1	6756494	.	TATATATATATATA	TATATATATATA	.	.	END=6756507;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.992278:6,6:6-7,6-7:11,7,0,0:6,11:NULL:106.224:366.612,131.36:0.382696,0.382696:0.996059,0.00394922,1.14248e-24	0/0:21:0.991242:7,7:7-7,7-7:11,10,0,0:7,11:NULL:132.924:326.675,113.385:0.0,0.0:1.14522e-19,0.00589292,0.994121
-chr1	6762157	.	CTTTCTTTCTTT	.	.	.	END=6762168;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.99973:3,3:3-3,3-3:15,6,0,0:3,15:NULL:115.032:366.612,131.36:0.0,0.0:0.0,0.000133363,0.999871	0/0:14:0.979383:3,3:3-3,3-3:9,5,0,0:3,9:NULL:84.5507:326.675,113.385:0.0,0.0:2.28729e-30,0.010148,0.989873
-chr1	6765667	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6765686;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:5,5:5-5,5-5:20,6,0,4:5,20:3,1|4,3:164.803:366.612,131.36:0.0,0.0:0.0,3.0411e-06,1.0	0/0:41:1.0:5,5:5-5,5-5:25,14,0,2:5,25:3,2:246.049:326.675,113.385:0.0,0.0:0.0,1.92216e-07,1.0
-chr1	6766469	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6766494;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.8163:20,20:18-23,18-23:7,16,0,8:20,7:8,1|10,1|13,2|14,1|16,1|18,1|19,1:243.529:366.612,131.36:1.7276,1.7276:0.0,0.0,1.0	0/0:44:0.997988:13,13:13-13,13-13:18,15,0,11:12,2|13,16:4,1|5,1|6,1|9,3|10,2|11,2|12,1:301.827:326.675,113.385:0.139319,0.139319:3.51002e-17,0.00196364,0.998042
-chr1	6766823	.	AAAAGAAAAGAAAAG	.	.	.	END=6766837;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999829:3,3:3-3,3-3:16,10,0,0:3,16:NULL:159.17:366.612,131.36:0.0,0.0:0.0,0.000110301,0.999894	0/0:28:0.999828:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.407:326.675,113.385:0.0,0.0:0.0,0.000120073,0.99988
-chr1	6772439	.	GGGTGGGTGGGT	.	.	.	END=6772450;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.568148:3,3:2-3,2-3:4,25,0,2:3,4:2,2:265.765:366.612,131.36:0.195027,0.195027:2.67462e-12,0.259457,0.740549	0/0:30:0.999152:3,3:3-3,3-3:14,16,0,0:3,14:NULL:197.744:326.675,113.385:0.0,0.0:7.51e-43,0.000631579,0.99937
-chr1	6777440	.	AAGAAGAAGAAG	.	.	.	END=6777451;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:24,10,0,0:4,24:NULL:188.867:366.612,131.36:0.0,0.0:0.0,4.41209e-07,1.0	0/0:38:1.0:4,4:4-4,4-4:25,11,0,2:4,25:3,2:210.852:326.675,113.385:0.0,0.0:0.0,1.09758e-07,1.0
-chr1	6782984	.	AAGAAGAAGAAG	.	.	.	END=6782995;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-5,4-5:25,11,0,0:4,25:NULL:198.879:366.612,131.36:0.311527,0.311527:0.0,3.56499e-07,1.0	0/0:44:1.0:4,4:3-4,3-4:24,19,0,0:4,24:NULL:268.718:326.675,113.385:0.270063,0.270063:0.0,6.42206e-07,1.0
-chr1	6784915	.	ACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6784950;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.538962:26,26:26-26,26-26:4,17,0,15:26,4:7,1|8,1|9,2|11,2|13,2|15,2|16,1|20,2|22,1|23,1:298.207:366.612,131.36:0.0990099,0.0990099:0.0,0.0,1.0	0/0:45:0.971275:18,18:16-18,16-18:10,21,0,12:18,10:5,1|7,2|9,1|10,2|11,1|12,1|14,2|15,2:331.534:326.675,113.385:0.480581,0.480581:1.27448e-12,0.0139845,0.986045
-chr1	6785690	.	TAAATAAATAAA	.	.	.	END=6785701;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,17,0,0:3,37:NULL:297.244:366.612,131.36:0.0,0.0:0.0,3.93083e-11,1.0	0/0:61:1.0:3,3:3-3,3-3:38,23,0,0:3,38:NULL:354.587:326.675,113.385:0.0,0.0:0.0,2.68286e-11,1.0
-chr1	6788409	.	TTTGTTTGTTTG	.	.	.	END=6788420;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:21,31,0,0:3,21:NULL:365.753:366.612,131.36:0.0,0.0:0.0,4.74914e-06,0.999995	0/0:47:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:259.589:326.675,113.385:0.0,0.0:0.0,7.9757e-10,1.0
-chr1	6790829	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6790884;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.100914:21,21:16-23,16-23:2,19,0,5:21,2:7,2|10,1|11,1|20,1:227.266:366.612,131.36:2.87013,2.87013:1.0,0.0,0.0	0/2:28:0.784671:28,29:28-29,28-29:6,13,0,9:28,4|29,2:5,1|6,1|7,1|13,1|14,1|15,1|16,1|24,1|25,1:230.192:326.675,113.385:0.253975,0.44763:8.85426e-07,0.0276042,0.972453
-chr1	6790889	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6790928;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.695649:14,15:14-16,15-16:9,21,0,4:14,3|15,6:11,2|12,1|14,1:268.723:366.612,131.36:0.637827,0.169767:1.0,0.0,0.0	0/0:33:0.98747:20,20:20-21,20-21:11,13,0,7:20,11:6,1|9,1|10,2|12,1|13,1|18,1:228.719:326.675,113.385:0.294378,0.294378:1.13944e-13,0.00558371,0.994429
-chr1	6798413	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=6798460;RU=gata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.649047:15,15:10-15,10-15:4,13,0,12:15,4:4,1|5,1|8,1|12,2|13,2|14,5:230.461:366.612,131.36:1.99337,1.99337:0.0,0.00268667,0.997321	0/0:32:0.992273:12,12:12-12,12-12:10,13,0,9:12,10:2,1|4,1|5,1|6,1|8,1|9,1|11,3:229.25:326.675,113.385:0.0,0.0:2.29615e-23,0.00432192,0.995689
-chr1	6801379	.	ACAAGACAAGACAAG	.	.	.	END=6801393;RU=acaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999695:3,3:3-3,3-3:14,10,0,0:3,14:NULL:150.4:366.612,131.36:0.0,0.0:0.0,0.00020878,0.999795	0/0:52:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:318.985:326.675,113.385:0.0,0.0:0.0,8.73404e-09,1.0
-chr1	6802048	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6802089;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.993973:15,15:15-15,15-15:12,19,0,8:15,12:5,1|6,1|8,1|9,1|10,1|12,1|14,2:285.784:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:43:0.961253:21,21:18-29,18-29:15,13,0,13:20,3|21,12:5,1|6,1|8,1|10,1|13,3|15,1|16,1|18,1|19,2|20,1:297.166:326.675,113.385:4.22868,4.22868:1.29016e-12,0.0378589,0.962208
-chr1	6804083	.	TGCTGCTGCTGCTGC	.	.	.	END=6804097;RU=tgc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999993:5,5:5-5,5-5:20,14,0,0:5,20:NULL:206.277:366.612,131.36:0.0,0.0:0.0,1.2538e-05,0.999987	0/0:39:1.0:5,5:5-5,5-5:29,10,0,0:5,29:NULL:204.217:326.675,113.385:0.0,0.0:0.0,1.42854e-08,1.0
-chr1	6806447	.	CATGCATGCATG	.	.	.	END=6806458;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:3,3:3-3,3-3:34,27,0,0:3,34:NULL:373.021:366.612,131.36:0.0,0.0:0.0,5.00038e-10,1.0	0/0:49:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:287.628:326.675,113.385:0.0,0.0:0.0,5.02911e-09,1.0
-chr1	6812486	.	AGCAAGCAAGCA	.	.	.	END=6812497;RU=agca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.99993:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.095:366.612,131.36:0.0,0.0:0.0,4.03126e-05,0.999963	0/0:30:0.999946:3,3:3-3,3-3:17,13,0,0:3,17:NULL:190.203:326.675,113.385:0.0,0.0:0.0,5.80473e-05,0.999942
-chr1	6829363	.	ACCCACCCACCC	.	.	.	END=6829374;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.916632:3,3:3-3,3-3:7,18,0,0:3,7:NULL:192.672:366.612,131.36:0.0,0.0:5.55052e-22,0.0621172,0.937973	0/0:43:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:284.469:326.675,113.385:0.0,0.0:0.0,4.73609e-06,0.999995
-chr1	6830436	.	ACACACACACAC	.	.	.	END=6830447;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999811:6,6:5-7,5-7:27,9,0,4:5,2|6,25:4,1|5,3:229.185:366.612,131.36:0.374933,0.374933:0.0,0.000191561,0.999811	0/0:37:0.998197:6,6:5-6,5-6:23,10,0,4:5,2|6,21:4,2|5,2:221.385:326.675,113.385:0.36513,0.36513:4.3e-44,0.00180941,0.998194
-chr1	6830470	.	GGAGGGAGGGAG	.	.	.	END=6830481;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,8,0,2:3,26:2,2:189.305:366.612,131.36:0.0,0.0:0.0,8.93492e-08,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:186.791:326.675,113.385:0.0,0.0:0.0,1.12599e-06,1.0
-chr1	6831326	.	AAGCAAGCAAGC	.	.	.	END=6831337;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.994923:3,3:3-3,3-3:11,23,0,0:3,11:NULL:260.069:366.612,131.36:0.0,0.0:6.69228e-35,0.0030612,0.99695	0/0:25:0.999973:3,3:3-3,3-3:18,7,0,0:3,18:NULL:136.979:326.675,113.385:0.0,0.0:0.0,2.05381e-05,0.99998
-chr1	6832131	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6832174;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:40:0.323942:22,39:22-22,22-40:13,13,0,13:21,4|22,9:5,1|9,1|10,2|12,1|17,2|18,1|20,2|22,1|25,1|39,1:295.33:366.612,131.36:0.0990099,7.11791:1.85089e-26,5.46776e-09,1.0	0/0:41:0.818535:22,22:22-23,22-23:15,12,0,14:21,2|22,11|23,2:4,1|5,1|6,1|9,1|10,1|11,1|12,1|13,1|15,3|16,1|18,1|20,1:293.524:326.675,113.385:0.469228,0.469228:1.8178e-13,0.00523002,0.994783
-chr1	6834875	.	CTTCTTCTTCTTCTT	.	.	.	END=6834889;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998465:5,5:4-5,4-5:14,15,0,0:5,14:NULL:196.131:366.612,131.36:0.36513,0.36513:5.05e-42,0.00124333,0.998762	0/0:41:1.0:5,5:5-5,5-5:24,17,0,0:5,24:NULL:253.329:326.675,113.385:0.0,0.0:0.0,8.6663e-07,1.0
-chr1	6842625	.	ATGGATGGATGG	.	.	.	END=6842636;RU=atgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:30,20,0,0:3,30:NULL:299.761:366.612,131.36:0.0,0.0:0.0,5.34059e-09,1.0	0/0:46:1.0:3,3:3-3,3-3:27,16,0,3:3,27:2,3:272.712:326.675,113.385:0.0,0.0:0.0,2.1608e-08,1.0
-chr1	6845815	.	TGTTGTTGTTGT	.	.	.	END=6845826;RU=tgt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:21,12,0,2:4,21:3,2:209.619:366.612,131.36:0.0,0.0:0.0,2.37087e-06,1.0	0/0:22:0.999669:4,4:4-4,4-4:15,7,0,0:4,15:NULL:125.168:326.675,113.385:0.0,0.0:0.0,0.00017801,0.999826
-chr1	6852419	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA,AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6852478;RU=agga;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:56:0.991325:15,17:5-15,5-17:6,30,0,18:15,4|17,2:3,1|5,1|6,1|7,1|8,1|9,4|10,2|11,2|12,1|14,2|15,1|16,1:437.994:366.612,131.36:4.50067,5.02301:2.62865e-23,2.88987e-06,1.0	0/1:44:0.879306:15,16:15-15,15-16:12,20,0,12:15,9|16,3:3,1|5,1|6,1|7,1|9,2|11,2|12,2|13,1|15,1:332.587:326.675,113.385:0.0,0.484441:2.61894e-23,0.000296602,0.999705
-chr1	6852486	.	AGGCAGGCAGGC	.	.	.	END=6852497;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:25,28,0,0:3,25:NULL:350.825:366.612,131.36:0.0,0.0:0.0,3.01088e-07,1.0	0/0:43:1.0:3,3:3-3,3-3:31,12,0,0:3,31:NULL:228.067:326.675,113.385:0.0,0.0:0.0,2.71519e-09,1.0
-chr1	6855646	.	CAGCAGCAGCAGCAG	.	.	.	END=6855660;RU=cag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:28,15,0,0:5,28:NULL:240.107:366.612,131.36:0.0,0.0:0.0,3.39882e-08,1.0	0/0:35:1.0:5,5:5-5,5-5:24,11,0,0:5,24:NULL:195.661:326.675,113.385:0.0,0.0:0.0,4.6101e-07,1.0
-chr1	6856365	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6856396;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.168138:31,31:22-31,22-31:2,6,0,9:31,2:5,1|7,1|8,1|13,1|15,1|17,1|23,1|28,1|30,1:139.102:366.612,131.36:4.26,4.26:0.0,0.0,1.0	0/0:29:0.999082:16,16:16-16,16-16:20,5,0,4:15,3|16,17:5,1|10,1|11,1|15,1:165.745:326.675,113.385:0.0,0.0:2.09772e-20,0.000841373,0.999164
-chr1	6858278	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6858317;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:49:0.293981:17,27:17-17,16-29:13,16,0,19:16,4|17,9:5,2|6,1|8,3|9,1|10,3|11,1|12,2|13,1|15,3|16,1|26,1:375.164:366.612,131.36:0.139319,5.28021:0.000461757,0.999538,1.06857e-27	0/3:48:0.330157:20,36:20-20,19-36:20,12,0,16:19,5|20,13|21,2:4,1|5,1|8,1|9,2|11,1|12,2|14,1|15,1|16,3|17,1|18,1|36,1:357.236:326.675,113.385:0.0990099,8.00505:3.23109e-15,0.00236699,0.99764
-chr1	6862315	.	AAAATAAAATAAAAT	.	.	.	END=6862329;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999771:3,3:3-3,3-3:16,13,0,0:3,16:NULL:184.204:366.612,131.36:0.0,0.0:0.0,0.000148907,0.99985	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:238.178:326.675,113.385:0.0,0.0:0.0,2.03729e-07,1.0
-chr1	6864440	.	TTTGTTTGTTTG	.	.	.	END=6864451;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.9999:3,3:3-3,3-3:16,18,0,0:3,16:NULL:224.335:366.612,131.36:0.0,0.0:0.0,7.11331e-05,0.999932	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:161.012:326.675,113.385:0.0,0.0:0.0,2.86971e-07,1.0
-chr1	6865995	.	AAAGAAAAGAAAAGA	AAAGAAAAGA	.	.	END=6866009;RU=aaaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.999474:2,2:2-2,2-2:14,22,0,0:2,14:NULL:281.364:366.612,131.36:0.0,0.0:0.999782,0.000218486,1.0213e-41	0/0:28:0.997123:3,3:3-3,3-3:11,14,0,3:3,11:2,3:191.584:326.675,113.385:0.0,0.0:2.80918e-35,0.00147673,0.998527
-chr1	6868261	.	GTTTGTTTGTTT	.	.	.	END=6868272;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.99998:3,3:3-3,3-3:18,12,0,0:3,18:NULL:182.169:366.612,131.36:0.0,0.0:0.0,1.59765e-05,0.999986	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:254.657:326.675,113.385:0.0,0.0:0.0,6.79809e-08,1.0
-chr1	6869420	.	ATGTAGATGTAGATGTAGATGTAG	ATGTAGATGTAGATGTAG	.	.	END=6869443;RU=atgtag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:1.0:3,3:3-3,3-3:30,15,0,2:3,30:2,2:271.461:366.612,131.36:0.0,0.0:1.0,2.36335e-09,0.0	0/0:38:1.0:4,4:4-4,4-4:28,8,0,2:4,28:3,2:201.403:326.675,113.385:0.0,0.0:0.0,1.7602e-08,1.0
-chr1	6870752	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6870787;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:49:0.681137:25,25:24-26,24-26:5,22,0,20:25,5:4,2|8,1|9,2|11,2|14,1|15,1|16,1|19,2|20,3|22,1|23,3|24,1:385.769:366.612,131.36:0.597515,0.597515:0.0,0.0,1.0	0/1:38:0.986942:18,19:17-18,17-19:14,13,0,11:17,3|18,9|19,2:4,1|6,1|7,1|10,1|12,1|13,1|15,2|16,1|17,1|19,1:282.411:326.675,113.385:0.169767,0.61895:5.50292e-17,0.000124617,0.999879
-chr1	6872012	.	TTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTG	.	.	END=6872031;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:26:0.984722:3,4:3-4,4-4:12,14,0,0:3,2|4,10:NULL:189.039:366.612,131.36:0.478946,0.0:4.49923e-26,0.984772,0.0152629	0/0:27:0.999866:4,4:4-4,4-4:16,8,0,3:4,16:2,1|3,2:156.875:326.675,113.385:0.0,0.0:0.0,6.58613e-05,0.999934
-chr1	6872093	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6872104;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.942844:18,19:18-19,19-19:9,13,0,8:18,2|19,7:6,2|9,1|14,1|15,1|17,2|18,1:229.936:366.612,131.36:0.489073,0.0:0.0,0.0,1.0	0/0:22:0.99991:6,6:6-6,6-6:17,5,0,0:6,17:NULL:110.788:326.675,113.385:0.0,0.0:2.43651e-29,5.65674e-05,0.999947
-chr1	6872191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6872254;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.835472:14,14:12-14,12-14:7,6,0,0:14,7:NULL:84.8398:366.612,131.36:0.803751,0.803751:1.0,0.0,0.0	2/3:26:0.0451539:29,34:16-32,16-34:0,13,0,10:NULL:5,1|8,1|13,1|16,1|20,1|26,1|27,1|29,2|34,1:195.557:326.675,113.385:7.01576,8.73288:5.43447e-08,0.643162,0.35688
-chr1	6876058	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC	.	.	END=6876085;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:0.985613:18,18:16-18,16-18:17,21,0,14:16,2|18,15:6,1|7,3|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,1:392.646:366.612,131.36:0.673267,0.673267:0.0,6.87905e-06,0.999994	0/0:35:0.999752:14,14:14-17,14-17:17,5,0,9:14,17:5,2|8,2|9,1|11,1|12,1|13,1|14,1:190.632:326.675,113.385:0.924033,0.924033:3.31908e-30,2.98706e-05,0.999971
-chr1	6876396	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=6876439;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:8,8:8-8,8-8:27,15,0,9:8,27:4,2|5,1|7,6:316.024:366.612,131.36:0.0,0.0:1.0,1.22712e-08,0.0	0/0:35:0.995289:11,11:10-11,10-11:11,15,0,8:11,11:3,1|4,1|5,2|6,1|7,1|8,1|9,1:246.682:326.675,113.385:0.323567,0.323567:2.91614e-28,0.00364165,0.996368
-chr1	6876754	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6876787;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.57464:20,20:17-20,17-20:8,15,0,4:19,2|20,6:6,1|14,3:218.122:366.612,131.36:1.04876,1.04876:2.22301e-25,0.0277766,0.972279	0/0:45:0.953393:17,17:17-18,17-18:15,15,0,15:17,13|18,2:4,2|7,2|9,1|11,1|12,4|13,1|14,2|15,1|16,1:330.521:326.675,113.385:0.298675,0.298675:9.93793e-16,0.00036573,0.999636
-chr1	6877580	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6877621;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.982039:16,16:16-16,16-16:11,21,0,9:16,11:6,2|8,1|9,2|10,2|15,2:310.378:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/2:22:0.299487:21,25:21-21,21-27:7,5,0,10:21,7:6,1|7,1|8,2|9,1|10,1|12,1|14,1|16,1|25,1:164.464:326.675,113.385:0.0,2.20972:3.99637e-15,1.38343e-07,1.0
-chr1	6877626	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6877675;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.921099:25,25:23-26,23-26:9,18,0,5:25,9:5,1|6,1|10,1|11,1|14,1:248.263:366.612,131.36:0.694906,0.694906:7.95104e-13,0.0391718,0.960897	1/1:20:0.124742:24,24:17-25,17-25:2,6,0,9:24,2:6,1|9,1|11,2|15,1|16,2|17,2:136.348:326.675,113.385:3.45807,3.45807:0.699534,0.284439,0.016058
-chr1	6881104	.	ATATATATATAT	ATATATATATATAT	.	.	END=6881115;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999432:7,7:6-8,6-8:23,12,0,0:6,2|7,19|8,2:NULL:218.603:366.612,131.36:0.263076,0.263076:0.0,2.27564e-06,1.0	0/0:31:1.00001:6,6:6-6,6-6:21,9,0,0:6,21:NULL:171.527:326.675,113.385:0.0,0.0:4.71048e-28,4.14109e-06,0.999995
-chr1	6881253	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6881268;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.0:7,7:7-7,7-7:32,21,0,2:7,32:4,1|5,1:332.74:366.612,131.36:0.0,0.0:1.0,1.53291e-09,0.0	0/2:35:0.296309:8,13:8-8,8-14:19,12,0,4:8,19:4,1|5,1|7,1|13,1:230.348:326.675,113.385:0.0,2.59293:3.54084e-40,9.23434e-08,1.0
-chr1	6882309	.	TTGTTGTTGTTG	.	.	.	END=6882320;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:21,18,0,0:4,21:NULL:252.298:366.612,131.36:0.0,0.0:0.0,6.90775e-06,0.999994	0/0:28:0.999986:4,4:4-4,4-4:19,9,0,0:4,19:NULL:159.511:326.675,113.385:0.0,0.0:0.0,1.9165e-05,0.99998
-chr1	6884104	.	CAACAACAACAACAA	.	.	.	END=6884118;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:5,5:5-5,5-5:29,25,0,5:5,29:3,2|4,3:394.96:366.612,131.36:0.0,0.0:0.0,7.48635e-09,1.0	0/0:33:1.00001:5,5:5-5,5-5:21,10,0,2:5,21:4,2:192.446:326.675,113.385:0.0,0.0:0.0,3.0523e-06,1.0
-chr1	6886094	.	AAAACAAAACAAAAC	.	.	.	END=6886108;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:239.002:366.612,131.36:0.0,0.0:0.0,2.78941e-07,1.0	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:152.486:326.675,113.385:0.0,0.0:0.0,6.3523e-06,0.999994
-chr1	6888655	.	GCCAGCCAGCCA	.	.	.	END=6888666;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:237.094:366.612,131.36:0.0,0.0:0.0,2.2127e-08,1.0	0/0:32:1.0:3,3:3-3,3-3:23,7,0,2:3,23:2,2:168.016:326.675,113.385:0.0,0.0:0.0,4.24213e-07,1.0
-chr1	6891722	.	AGGGAGGGAGGGAGGG	.	.	.	END=6891737;RU=aggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999993:4,4:4-4,4-4:19,20,0,0:4,19:NULL:256.994:366.612,131.36:0.0,0.0:0.0,1.69107e-05,0.999986	0/0:35:0.999888:4,4:3-4,3-4:16,18,0,0:4,16:NULL:228.159:326.675,113.385:0.21692,0.21692:1.29816e-39,0.000103964,0.999896
-chr1	6891738	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6891777;RU=ga;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.0539607:8,40:1-34,30-40:0,26,0,9:NULL:8,2|23,1|27,1|28,2|30,1|36,1|38,1:320.108:366.612,131.36:8.48812,2.77655:0.0,0.861394,0.138693	0/0:36:0.525647:20,20:18-20,18-20:9,18,0,8:19,3|20,6:5,1|6,1|8,1|14,3|18,1|20,1:277.976:326.675,113.385:0.66122,0.66122:2.49917e-14,0.468764,0.531344
-chr1	6897317	.	TATATATATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=6897366;RU=ta;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00329521:1,1:1-4,1-4:0,6,0,0:NULL:NULL:52.7677:366.612,131.36:0.947603,0.947603:0.508489,0.44558,0.046024	2/2:9:0.110435:24,24:19-26,19-26:2,4,0,0:24,2:NULL:48.8495:326.675,113.385:2.84784,2.84784:0.636096,0.33096,0.0330274
-chr1	6901344	.	TATTATTATTAT	.	.	.	END=6901355;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:34,19,0,2:4,34:3,2:320.056:366.612,131.36:0.0,0.0:0.0,3.95915e-10,1.0	0/0:21:0.999632:4,4:4-4,4-4:15,6,0,0:4,15:NULL:114.575:326.675,113.385:0.0,0.0:3.2e-44,0.000213797,0.999788
-chr1	6901756	.	TTGGTTGGTTGG	.	.	.	END=6901767;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:300.394:366.612,131.36:0.0,0.0:0.0,4.12473e-06,0.999995	0/0:26:0.999895:3,3:3-3,3-3:16,6,0,4:3,16:2,4:150.512:326.675,113.385:0.0,0.0:0.0,3.60843e-05,0.999964
-chr1	6905302	.	ACCACCACCACC	.	.	.	END=6905313;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:32,12,0,0:4,32:NULL:235.669:366.612,131.36:0.0,0.0:0.0,1.35117e-09,1.0	0/0:19:0.995309:4,4:4-4,4-4:11,8,0,0:4,11:NULL:114.625:326.675,113.385:0.0,0.0:1.1877e-37,0.00296103,0.997048
-chr1	6908211	.	CCCTCCCTCCCT	.	.	.	END=6908222;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:28,17,0,0:3,28:NULL:271.107:366.612,131.36:0.0,0.0:0.0,2.38284e-08,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.755:326.675,113.385:0.0,0.0:0.0,2.04981e-06,1.0
-chr1	6910139	.	AAACAAACAAACAAACAAAC	.	.	.	END=6910158;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:5,5:5-5,5-5:26,16,0,5:5,26:3,2|4,3:284.722:366.612,131.36:0.0,0.0:0.0,3.30433e-08,1.0	0/0:29:0.998254:5,5:5-5,5-5:13,14,0,2:5,13:2,1|4,1:194.432:326.675,113.385:0.0,0.0:2e-44,0.00126943,0.998733
-chr1	6911240	.	CCCACCCCACCCCAC	.	.	.	END=6911254;RU=cccac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999009:3,3:3-3,3-3:14,22,0,0:3,14:NULL:263.812:366.612,131.36:0.19802,0.19802:1.35e-43,0.000773966,0.999227	0/0:24:0.945509:3,3:3-3,3-3:8,16,0,0:3,8:NULL:177.178:326.675,113.385:0.19802,0.19802:1.03576e-24,0.0401747,0.959892
-chr1	6925140	.	TTTGTTTGTTTGTTTG	.	.	.	END=6925155;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:21,14,0,4:4,21:2,2|3,2:245.162:366.612,131.36:0.0,0.0:0.0,3.32111e-06,1.0	0/0:35:1.0:4,4:4-4,4-4:20,13,0,2:4,20:2,1|3,1:211.672:326.675,113.385:0.0,0.0:0.0,6.06461e-06,0.999994
-chr1	6930503	.	TGTTTTTTTGTTTTTTTGTTTTTT	.	.	.	END=6930526;RU=tgtttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.996973:3,3:1-3,1-3:12,10,0,0:3,12:NULL:142.16:366.612,131.36:0.922441,0.922441:1.80829e-40,0.00235837,0.997648	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:171.573:326.675,113.385:0.0,0.0:0.0,2.04177e-06,1.0
-chr1	6933915	.	GAGGGGAGGAGGGGAGGAGGGGAGGAGGGGAG	GAGGGGAGGAGGGGAG	.	.	END=6933946;RU=gaggggag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.999974:2,2:2-2,2-2:18,10,0,0:2,18:NULL:163.717:366.612,131.36:0.0,0.0:0.999986,1.75747e-05,0.0	0/0:8:0.353389:4,4:1-4,1-4:3,5,0,0:4,3:NULL:60.2262:326.675,113.385:0.782116,0.782116:2.05313e-08,0.459316,0.540791
-chr1	6935598	.	TACATACATACA	.	.	.	END=6935609;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:24,3,0,3:3,24:2,3:140.786:366.612,131.36:0.0,0.0:0.0,1.42977e-07,1.0	0/0:26:0.999555:3,3:3-3,3-3:14,8,0,4:3,14:2,4:155.577:326.675,113.385:0.0,0.0:0.0,0.000136997,0.999865
-chr1	6935929	.	TAATTAATTAAT	.	.	.	END=6935940;RU=taat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:24,18,0,3:3,24:2,3:274.258:366.612,131.36:0.0,0.0:0.0,1.95933e-07,1.0	0/0:20:0.997324:3,3:3-3,3-3:12,8,0,0:3,12:NULL:115.153:326.675,113.385:0.0,0.0:6.01711e-39,0.00141431,0.998588
-chr1	6938052	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6938097;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:56:0.340107:15,23:15-15,15-24:26,22,0,7:15,26:4,1|9,1|10,1|14,2|16,1|22,1:386.612:366.612,131.36:0.0,3.7378:0.269567,0.730435,0.0	0/2:58:0.361021:23,29:23-23,20-31:15,17,0,23:22,2|23,13:5,1|6,1|7,1|8,1|11,2|12,2|13,3|14,1|16,2|17,1|18,2|19,1|20,1|21,2|22,1|29,1:436.004:326.675,113.385:0.0,3.32414:1.20159e-17,2.01133e-05,0.99998
-chr1	6938544	.	ATACATACATACATAC	.	.	.	END=6938559;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:81:1.0:4,4:4-4,4-4:48,27,0,6:4,48:3,6:480.317:366.612,131.36:0.0,0.0:0.0,1.37533e-14,1.0	0/0:65:1.0:4,4:4-4,4-4:39,21,0,5:4,39:2,1|3,4:381.92:326.675,113.385:0.0,0.0:0.0,7.22622e-12,1.0
-chr1	6938593	.	CACACACACACACACACA	CACACACACACACACACACA,CACACACACACACACACACACA	.	.	END=6938610;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:42:0.969887:9,11:9-10,9-11:8,27,0,7:9,3|10,2|11,3:5,1|6,1|8,4|9,1:349.387:366.612,131.36:0.425627,0.513899:5.37484e-21,1.1268e-05,0.999993	0/1:64:0.961031:9,10:9-9,9-10:30,23,0,10:9,28|10,2:4,2|5,1|8,6|10,1:428.184:326.675,113.385:0.0,0.498798:7.6e-44,2.5635e-10,1.0
-chr1	6938918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6938965;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:76:0.560131:25,25:24-27,24-27:15,32,0,28:24,5|25,8|26,2:8,2|9,2|10,2|11,3|12,4|13,1|14,1|15,1|16,2|17,3|19,2|22,1|23,2|24,1|25,1:605.849:366.612,131.36:0.837322,0.837322:1.36305e-31,8.65444e-05,0.999917	0/2:64:0.403396:24,29:24-24,24-29:18,24,0,20:23,5|24,13:5,3|6,1|7,1|8,1|9,1|10,1|11,1|13,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|28,1|29,1:487.422:326.675,113.385:0.0,1.35271:1.02382e-27,1.19979e-11,1.0
-chr1	6945641	.	TGTGAGTGTGAGTGTGAG	TGTGAGTGTGAGTGTGAGTGTGAGTGTGAG	.	.	END=6945658;RU=tgtgag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:35:1.0:3,5:3-3,5-5:21,14,0,0:3,14|5,7:NULL:226.503:366.612,131.36:0.0,0.0:0.0,3.70882e-29,1.0	0/0:54:1.0:3,3:3-3,3-3:29,21,0,4:3,29:2,3|3,1:332.918:326.675,113.385:0.0,0.0:0.0,8.39224e-09,1.0
-chr1	6945661	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6945680;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.284109:16,33:16-16,15-34:20,14,0,9:15,5|16,13|18,2:5,1|8,2|11,1|12,2|16,1|29,1|32,1:327.387:366.612,131.36:0.0990099,8.11798:0.0,0.0,1.0	0/0:62:1.0:10,10:10-10,10-10:39,17,0,6:9,3|10,36:5,1|6,1|7,1|8,1|9,2:371.987:326.675,113.385:0.0990099,0.0990099:0.0,2.72637e-08,1.0
-chr1	6954438	.	TATATATATATATATATA	TATATATATATATATATATA	.	.	END=6954455;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.803913:10,10:10-11,10-11:6,5,0,0:10,6:NULL:69.3638:366.612,131.36:0.465241,0.465241:6.04208e-12,0.0552173,0.944865	0/0:22:0.999478:9,9:9-9,9-9:15,7,0,0:9,15:NULL:128.249:326.675,113.385:0.0,0.0:2.06945e-18,0.000350763,0.999652
-chr1	6956316	.	ATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=6956347;RU=attt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.816834:7,7:6-7,6-7:6,9,0,3:7,6:3,1|5,1|6,1:131.956:366.612,131.36:0.481803,0.481803:0.925084,0.0750118,2.38259e-10	0/0:26:0.999661:8,8:8-8,8-8:15,5,0,6:8,15:3,2|5,2|6,2:152.494:326.675,113.385:0.0,0.0:6.12333e-34,0.000170439,0.999833
-chr1	6957040	.	ATCATCATCATC	.	.	.	END=6957051;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999894:4,4:4-4,4-4:16,14,0,2:4,16:3,2:206.579:366.612,131.36:0.0,0.0:1.47e-43,7.23921e-05,0.999932	0/0:36:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:182.817:326.675,113.385:0.0,0.0:0.0,3.3155e-08,1.0
-chr1	6958768	.	GTGTGTGTGTGT	GTGTGT,GTGTGTGTGTGTGTGTGT	.	.	END=6958779;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:0.425553:3,6:3-13,6-13:17,14,0,4:3,11|6,6:4,1|5,1|9,1|11,1:275.27:366.612,131.36:2.75429,2.87398:6.8036e-10,1.0,4.1744e-19	0/2:29:0.293816:6,9:6-6,6-10:10,17,0,2:6,10:6,1|8,1:213.017:326.675,113.385:0.0,1.39551:5.11656e-28,6.98227e-08,1.0
-chr1	6958877	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6958916;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:53:0.288595:17,27:17-17,16-27:20,18,0,15:16,4|17,14|18,2:4,1|5,1|6,1|7,1|8,1|13,2|14,4|15,2|16,1|24,1:394.452:366.612,131.36:0.0,4.77915:0.0548475,0.945238,1.754e-42	0/3:44:0.318887:20,35:20-20,20-35:15,11,0,15:20,15:5,1|7,3|9,2|12,1|13,2|17,1|18,2|19,1|35,2:299.43:326.675,113.385:0.0,6.05764:5.30546e-27,3.70236e-14,1.0
-chr1	6961641	.	AAGAAAAAAGAAAAAAGAAAAAAGAAAA	.	.	.	END=6961668;RU=aagaaaa;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.87995:4,4:1-4,1-4:7,22,0,0:4,7:NULL:235.531:366.612,131.36:0.650759,0.650759:6.73077e-21,0.113659,0.886439	0/0:30:0.999069:4,4:4-4,4-4:15,15,0,0:4,15:NULL:201.791:326.675,113.385:0.0,0.0:9.2e-44,0.00088725,0.999118
-chr1	6967994	.	TAATAATAATAA	.	.	.	END=6968005;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:4,4:4-4,4-4:20,12,0,0:4,20:NULL:189.935:366.612,131.36:0.0,0.0:0.0,7.90063e-06,0.999994	0/0:25:0.999557:4,4:4-4,4-4:15,10,0,0:4,15:NULL:149.73:326.675,113.385:0.0,0.0:7.03689e-40,0.000286317,0.999713
-chr1	6969238	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6969285;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.890333:25,25:21-25,21-25:8,11,0,12:25,8:4,1|7,1|8,4|10,2|11,1|17,2|21,1:240.234:366.612,131.36:1.97147,1.97147:2.2967e-14,0.0600529,0.940036	0/0:47:0.66372:24,24:23-24,23-24:5,21,0,20:24,5:4,1|6,2|9,1|11,1|12,2|13,1|14,5|15,3|17,1|20,1|21,1|23,1:371.431:326.675,113.385:0.439006,0.439006:1.94957e-06,0.16676,0.83331
-chr1	6970340	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6970399;RU=ag;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0794809:21,21:16-25,16-25:2,9,0,0:21,2:NULL:102.005:366.612,131.36:3.59565,3.59565:1.0,0.0,0.0	0/0:28:0.484082:30,30:29-30,29-30:4,12,0,11:30,4:6,1|7,1|9,1|10,1|12,3|18,1|22,1|23,1|30,1:220.422:326.675,113.385:0.414188,0.414188:1.43804e-12,0.213388,0.786655
-chr1	6970529	.	AGACAGACAGAC	AGACAGACAGACAGAC	.	.	END=6970540;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.165059:3,4:1-4,1-4:0,22,0,0:NULL:NULL:217.65:366.612,131.36:0.696456,0.905169:0.0883328,0.445598,0.466221	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:168.514:326.675,113.385:0.0,0.0:0.0,4.77189e-06,0.999995
-chr1	6974307	.	ACACACACACAC	.	.	.	END=6974318;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997981:6,6:6-6,6-6:12,18,0,4:6,12:4,1|5,3:247.705:366.612,131.36:0.0,0.0:2.70056e-25,0.000648585,0.999355	0/0:19:0.92277:6,6:6-7,6-7:7,9,0,2:6,7:5,2:129.578:326.675,113.385:0.486863,0.486863:8.90486e-15,0.0332825,0.966779
-chr1	6978082	.	ATTTATTTATTTATTT	.	.	.	END=6978097;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999585:4,4:4-4,4-4:15,13,0,0:4,15:NULL:178.159:366.612,131.36:0.0,0.0:3e-45,0.000318068,0.999683	0/0:25:0.999606:4,4:4-4,4-4:15,10,0,0:4,15:NULL:154.043:326.675,113.385:0.0,0.0:3e-45,0.000300969,0.999704
-chr1	6979840	.	TTCATTCATTCA	.	.	.	END=6979851;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999935:3,3:3-3,3-3:17,10,0,0:3,17:NULL:155.607:366.612,131.36:0.0,0.0:0.0,3.22506e-05,0.999971	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:165.684:326.675,113.385:0.0,0.0:0.0,3.1439e-06,1.0
-chr1	6981484	.	TGTCTGTCTGTCTGTC	.	.	.	END=6981499;RU=tgtc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:4,4:4-4,4-4:44,11,0,2:4,44:3,2:283.345:366.612,131.36:0.0,0.0:0.0,2.90605e-13,1.0	0/0:60:1.0:4,4:4-4,4-4:32,19,0,9:4,32:2,1|3,8:361.317:326.675,113.385:0.0,0.0:0.0,7.5252e-10,1.0
-chr1	6982427	.	TTGTTTGTTTGTTTGT	.	.	.	END=6982442;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:30,13,0,4:4,30:2,1|3,3:265.948:366.612,131.36:0.0,0.0:0.0,3.12693e-09,1.0	0/0:48:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,3:271.065:326.675,113.385:0.0,0.0:0.0,1.84623e-09,1.0
-chr1	6982601	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6982652;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.542982:12,12:11-12,11-12:11,20,0,5:11,3|12,8:4,1|5,1|6,1|8,1|9,1:272.772:366.612,131.36:0.45695,0.45695:1.0,0.0,0.0	0/2:28:0.312785:26,39:24-27,24-39:3,6,0,17:26,3:7,1|8,2|10,1|12,1|15,2|16,1|17,2|18,1|24,3|25,2|39,1:210.08:326.675,113.385:0.517131,6.22137:8.48768e-11,0.000485426,0.999515
-chr1	6983427	.	GAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGA	.	.	END=6983442;RU=ga;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0292991:9,9:9-14,9-14:0,7,0,0:NULL:NULL:66.6014:366.612,131.36:1.08487,1.08487:0.0,0.0,1.0	0/0:23:0.929127:8,8:7-8,7-8:15,8,0,0:7,2|8,13:NULL:140.313:326.675,113.385:0.431574,0.431574:5.41404e-20,0.0708413,0.929253
-chr1	6985748	.	AATCAATCAATCAATCAATCAATCAATC	AATCAATCAATCAATC	.	.	END=6985775;RU=aatc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0496217:4,4:2-5,2-5:0,13,0,2:NULL:2,1|4,1:132.329:366.612,131.36:0.874544,0.874544:0.610375,0.347611,0.0421121	0/0:56:1.0:7,7:7-7,7-7:33,14,0,9:7,33:3,2|4,2|5,2|6,3:328.098:326.675,113.385:0.0,0.0:0.0,3.53258e-10,1.0
-chr1	6985795	.	AACAACAACAACAACAAC	.	.	.	END=6985812;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999876:6,6:5-6,5-6:17,16,0,0:6,17:NULL:214.345:366.612,131.36:0.236383,0.236383:1.7e-44,8.97379e-05,0.999911	0/0:50:1.0:6,6:6-6,6-6:34,14,0,2:6,34:4,2:280.867:326.675,113.385:0.0,0.0:0.0,3.42017e-10,1.0
-chr1	6986592	.	AAACAAACAAACAAAC	AAACAAACAAAC	.	.	END=6986607;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.095574:3,3:1-4,1-4:0,14,0,2:NULL:3,2:145.263:366.612,131.36:0.896573,0.896573:0.27164,0.550752,0.177626	0/0:33:0.998937:4,4:4-4,4-4:13,17,0,3:4,13:2,1|3,2:226.162:326.675,113.385:0.0,0.0:7.04477e-36,0.000588515,0.999415
-chr1	6987484	.	AAGAAAGAAAGA	.	.	.	END=6987495;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.408:366.612,131.36:0.0,0.0:0.0,1.80572e-06,1.0	0/0:26:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:128.281:326.675,113.385:0.0,0.0:0.0,2.64797e-06,1.0
-chr1	6988550	.	TAAATAAATAAA	.	.	.	END=6988561;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999939:3,3:3-3,3-3:17,8,0,0:3,17:NULL:148.37:366.612,131.36:0.0,0.0:0.0,3.19832e-05,0.999971	0/0:24:1.00001:3,3:3-3,3-3:21,3,0,0:3,21:NULL:111.913:326.675,113.385:0.0,0.0:0.0,2.54549e-06,1.0
-chr1	6988683	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=6988726;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.021606:9,9:1-11,1-11:0,7,0,2:NULL:8,1|9,1:82.6237:366.612,131.36:3.94562,3.94562:0.459313,0.48336,0.0574912	0/0:32:0.467214:11,11:9-11,9-11:13,12,0,7:9,2|11,11:3,1|6,2|7,1|8,1|10,2:229.771:326.675,113.385:0.999559,0.999559:5.65804e-20,0.53254,0.467569
-chr1	6988729	.	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	.	.	END=6988989;RU=cctttcttc;PERIOD=9;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0270839:9,9:1-10,1-10:0,4,0,2:NULL:8,1|9,1:49.0823:366.612,131.36:3.8178,3.8178:1.0,0.0,0.0	2/3:74:0.229205:13,44:10-19,40-49:0,5,45,24:NULL:4,4|5,1|6,3|7,3|8,2|9,3|10,5|11,1|12,1|13,1:532.764:326.675,113.385:1.94191,2.30908:2.71327e-26,1.0,2.09857e-20
-chr1	6988990	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=6989021;RU=cttt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0460909:12,12:12-15,12-15:0,8,0,3:NULL:3,2|7,1:99.5242:366.612,131.36:1.27204,1.27204:0.0,0.0,1.0	0/0:52:1.00001:8,8:4-8,4-8:23,14,0,14:8,23:3,2|4,5|5,2|6,1|7,4:324.178:326.675,113.385:0.780108,0.780108:0.0,4.11433e-07,1.0
-chr1	6994475	.	CTGCTGCTGCTG	.	.	.	END=6994486;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.992411:4,4:4-4,4-4:11,14,0,0:4,11:NULL:170.899:366.612,131.36:0.0,0.0:1.1156e-33,0.00521109,0.994799	0/0:43:1.0:4,4:4-4,4-4:24,19,0,0:4,24:NULL:271.361:326.675,113.385:0.0,0.0:0.0,1.08504e-06,1.0
-chr1	6996371	.	AATAATAATAATAATAAT	.	.	.	END=6996388;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999768:6,6:6-6,6-6:16,12,0,0:6,16:NULL:180.067:366.612,131.36:0.0,0.0:8.38304e-39,0.000169845,0.999833	0/0:42:1.0:6,6:2-6,2-6:26,11,0,4:6,26:5,4:232.728:326.675,113.385:1.24611,1.24611:0.0,5.89955e-08,1.0
-chr1	6996545	.	AAGAAGAAGAAGAAG	.	.	.	END=6996559;RU=aag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994013:5,5:5-5,5-5:11,12,0,2:5,11:3,1|5,1:174.922:366.612,131.36:0.0,0.0:2.00511e-39,0.00311578,0.996891	0/0:34:1.0:5,5:5-5,5-5:26,6,0,2:5,26:4,1|5,1:173.389:326.675,113.385:0.0,0.0:0.0,3.43247e-08,1.0
-chr1	6998981	.	AAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAAT	.	.	END=6998995;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.997585:5,5:5-5,5-5:13,14,0,0:5,13:NULL:187.766:366.612,131.36:0.0,0.0:0.0,0.000720986,0.99928	0/0:24:0.999132:3,3:3-3,3-3:13,9,0,2:3,13:2,2:142.538:326.675,113.385:0.0,0.0:6e-45,0.000369236,0.999636
-chr1	7000338	.	AATAAATAAATAAATAAATAAATA	AATA	.	.	END=7000361;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0780744:1,1:1-3,1-3:0,14,0,0:NULL:NULL:128.907:366.612,131.36:0.40047,0.40047:0.578545,0.378725,0.0428552	0/0:28:0.999853:6,6:6-6,6-6:16,8,0,4:6,16:3,1|4,1|5,2:169.898:326.675,113.385:0.0,0.0:4.152e-42,6.63619e-05,0.999934
-chr1	7002437	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7002468;RU=ga;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:31:0.98158:16,17:15-17,15-17:8,19,0,3:16,4|17,4:6,1|7,1|14,1:246.594:366.612,131.36:0.342408,0.451337:8.76787e-11,0.0012311,0.998771	0/0:36:0.731673:16,16:12-16,12-16:17,17,0,0:15,4|16,13:NULL:248.743:326.675,113.385:1.0297,1.0297:1.31245e-14,0.268042,0.731961
-chr1	7002484	.	GAAAGGAAAGGAAAG	.	.	.	END=7002498;RU=gaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:251.333:366.612,131.36:0.0,0.0:0.0,2.95141e-07,1.0	0/0:34:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:213.569:326.675,113.385:0.0,0.0:0.0,1.18702e-05,0.999987
-chr1	7003509	.	TATATATATATA	.	.	.	END=7003520;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.994474:6,6:6-6,6-6:12,18,0,0:6,12:NULL:217.202:366.612,131.36:0.0,0.0:2.94885e-21,0.00378633,0.996224	0/0:25:0.996778:6,6:6-6,6-6:12,13,0,0:6,12:NULL:167.642:326.675,113.385:0.0,0.0:1.43452e-21,0.00203514,0.997973
-chr1	7004299	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7004318;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:228.653:366.612,131.36:0.0,0.0:0.0,7.67878e-06,0.999994	0/0:30:0.999979:4,4:3-4,3-4:17,9,0,3:4,17:3,3:174.62:326.675,113.385:0.35561,0.35561:0.0,1.85123e-05,0.999985
-chr1	7004803	.	CACACACACACACACACACACACACACACA	.	.	.	END=7004832;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999293:15,15:15-15,15-15:15,19,0,14:15,15:4,1|7,1|10,2|11,4|12,2|14,4:356.714:366.612,131.36:0.0,0.0:2.76952e-21,0.000211699,0.999789	0/0:58:0.706049:15,15:14-15,14-15:16,20,0,22:14,4|15,12:5,4|6,4|7,2|8,2|9,1|10,4|11,1|12,1|14,3:434.637:326.675,113.385:0.442564,0.442564:8.53683e-14,0.293692,0.706312
-chr1	7005829	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=7005885;RU=tgt;PERIOD=3;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:0.741956:19,19:17-20,17-20:10,26,0,18:18,2|19,8:4,1|5,1|6,3|10,2|13,2|14,2|16,2|17,3|18,1|19,1:432.146:366.612,131.36:0.775697,0.775697:9.4889e-20,0.252631,0.747375	0/0:41:0.997035:19,19:18-19,18-19:12,12,0,16:19,12:5,2|6,1|7,2|12,2|13,1|14,1|15,2|16,3|18,2:284.233:326.675,113.385:0.169767,0.169767:2.05796e-21,0.00117709,0.998829
-chr1	7006807	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7006830;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999794:6,6:6-6,6-6:15,11,0,7:6,15:3,1|4,2|5,4:211.852:366.612,131.36:0.0,0.0:0.0,0.000106426,0.999895	0/0:23:0.975827:6,6:6-6,6-6:8,10,0,5:6,8:2,1|4,2|5,2:156.199:326.675,113.385:0.0,0.0:1.54873e-27,0.0118326,0.988195
-chr1	7006964	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=7007007;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.979752:13,13:13-13,13-13:9,7,0,4:13,9:4,1|6,1|7,2:131.034:366.612,131.36:0.0,0.0:6.58584e-29,0.00497299,0.99504	0/0:17:0.758626:11,11:11-11,11-11:5,5,0,7:11,5:2,1|4,1|6,1|7,1|8,1|9,2:116.354:326.675,113.385:0.0990099,0.0990099:1.36893e-12,0.116742,0.88336
-chr1	7008700	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=7008763;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.497359:17,17:16-17,16-17:3,16,0,12:17,3:4,2|6,1|7,2|8,2|10,1|13,1|15,1|16,2:253.862:366.612,131.36:0.253975,0.253975:3.20725e-23,0.0799344,0.920163	0/0:22:0.508596:16,16:13-16,13-16:4,10,0,8:16,4:5,1|6,3|7,2|8,1|10,1:169.954:326.675,113.385:0.772658,0.772658:4.78346e-09,0.374145,0.625905
-chr1	7009944	.	AACAACAACAAC	.	.	.	END=7009955;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:4,4:4-4,4-4:24,6,0,0:4,24:NULL:146.992:366.612,131.36:0.0,0.0:0.0,4.95377e-07,1.0	0/0:16:0.994513:4,4:4-4,4-4:11,5,0,0:4,11:NULL:89.5565:326.675,113.385:0.0,0.0:6.90523e-37,0.0032162,0.996792
-chr1	7016143	.	ATGTTATGTTATGTT	.	.	.	END=7016157;RU=atgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:26,9,0,0:3,26:NULL:183.945:366.612,131.36:0.0,0.0:0.0,1.15585e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:31,19,0,0:3,31:NULL:302.422:326.675,113.385:0.0,0.0:0.0,2.5526e-09,1.0
-chr1	7018592	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7018643;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.518763:14,14:14-15,14-15:11,11,0,8:14,9|15,2:5,1|6,1|9,1|12,2|13,3:214.581:366.612,131.36:0.594554,0.594554:1.0,0.0,0.0	2/3:49:0.975679:25,28:25-34,28-32:10,12,0,25:25,5|28,5:4,1|5,1|6,1|7,1|11,1|17,2|18,1|20,4|21,2|22,2|23,3|24,2|25,2|27,1|32,1:382.265:326.675,113.385:3.4316,1.90016:1.06017e-15,0.977485,0.022559
-chr1	7022856	.	ACACACACACACACACACACACAC	ACACACACACAC	.	.	END=7022879;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:38:0.94614:6,12:4-12,12-12:10,19,0,8:6,2|12,8:4,1|6,1|9,1|10,4|11,1:294.203:366.612,131.36:2.66025,0.0:8.80497e-17,0.951905,0.0481708	0/0:25:0.830934:12,12:10-12,10-12:6,9,0,8:12,6:4,1|5,1|6,2|7,1|9,1|10,1|11,1:174.926:326.675,113.385:0.831212,0.831212:1.38565e-12,0.094323,0.905777
-chr1	7022880	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7022935;RU=ag;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:35:0.377048:22,34:22-22,18-35:9,20,0,3:22,9:5,1|13,1|34,1:259.569:366.612,131.36:0.278639,6.38699:7.71756e-05,0.999925,8.7181e-26	0/2:25:0.217122:28,32:26-30,26-32:3,11,0,9:28,3:6,1|8,1|18,1|21,1|23,1|26,2|27,1|29,1:192.037:326.675,113.385:0.717258,1.5095:5.02768e-11,0.00427917,0.995733
-chr1	7023312	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=7023410;RU=ctt;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.0671344:25,29:23-31,25-31:0,16,0,19:NULL:4,1|9,2|10,1|13,1|14,1|15,1|16,2|17,1|20,1|21,1|22,2|23,1|24,2|26,1|29,1:296.96:366.612,131.36:2.70302,2.1949:1.0,0.0,0.0	3/3:31:0.0272976:34,34:11-34,11-34:0,15,0,15:NULL:6,1|7,2|13,2|15,1|18,1|20,1|21,1|22,1|23,1|28,1|32,1|33,1|34,1:257.589:326.675,113.385:10.0786,10.0786:9.48561e-16,0.620223,0.379835
-chr1	7025016	.	AACCAACCAACC	.	.	.	END=7025027;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:226.678:366.612,131.36:0.0,0.0:0.0,7.01753e-06,0.999994	0/0:35:1.00001:3,3:3-3,3-3:20,12,0,3:3,20:2,3:205.946:326.675,113.385:0.0,0.0:0.0,3.0456e-06,1.0
-chr1	7026416	.	TTTATTTTATTTTAT	.	.	.	END=7026430;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999863:3,3:3-3,3-3:16,20,0,0:3,16:NULL:251.656:366.612,131.36:0.0,0.0:0.0,0.000104511,0.999896	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:168.583:326.675,113.385:0.0,0.0:0.0,3.49234e-07,1.0
-chr1	7028391	.	AATAAATAAATA	.	.	.	END=7028402;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.735:366.612,131.36:0.0,0.0:0.0,9.56457e-07,1.0	0/0:43:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:243.642:326.675,113.385:0.0,0.0:0.0,1.91427e-08,1.0
-chr1	7028876	.	TTTATTTATTTA	.	.	.	END=7028887;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999966:3,3:3-3,3-3:18,11,0,0:3,18:NULL:172.431:366.612,131.36:0.0,0.0:0.0,2.71628e-05,0.999972	0/0:29:0.999871:3,3:3-3,3-3:17,12,0,0:3,17:NULL:186.491:326.675,113.385:0.0,0.0:0.0,9.72933e-05,0.999903
-chr1	7029276	.	ACACACACACACACACACACACAC	.	.	.	END=7029299;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999467:12,12:12-13,12-13:15,19,0,10:12,15:7,3|8,1|10,2|11,4:313.42:366.612,131.36:0.21692,0.21692:3.2571e-23,0.000121464,0.99988	0/0:56:0.999972:12,12:12-14,12-14:18,20,0,15:12,18:5,3|6,2|7,2|9,4|10,2|11,2:383.754:326.675,113.385:0.617999,0.617999:4.03621e-28,1.31504e-05,0.999987
-chr1	7029315	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7029344;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999899:6,6:6-6,6-6:17,16,0,4:6,17:2,2|3,1|5,1:243.699:366.612,131.36:0.0,0.0:0.0,7.21659e-05,0.999932	0/0:45:1.0:6,6:6-6,6-6:24,17,0,4:6,24:2,1|3,1|5,2:282.108:326.675,113.385:0.0,0.0:0.0,3.38642e-07,1.0
-chr1	7032756	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=7032799;RU=aata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.970244:11,11:11-11,11-11:7,14,0,14:11,7:3,1|5,4|6,1|7,2|8,3|9,1|10,2:257.761:366.612,131.36:0.0,0.0:1.68122e-16,0.0127223,0.987305	0/0:30:0.989657:11,11:11-15,11-15:10,12,0,7:11,10:6,3|7,2|10,2:198.339:326.675,113.385:1.77026,1.77026:2.88596e-22,0.00340046,0.99661
-chr1	7032984	.	ACAAAAAAACAAAAAAACAAAAAA	.	.	.	END=7033007;RU=acaaaaaa;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.975755:3,3:3-3,3-3:9,14,0,0:3,9:NULL:160.968:366.612,131.36:0.19802,0.19802:2.95058e-28,0.0203616,0.97968	0/0:25:0.99989:3,3:3-3,3-3:16,6,0,3:3,16:2,3:138.409:326.675,113.385:0.0,0.0:0.0,4.93539e-05,0.999955
-chr1	7033046	.	AGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC,AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	END=7033061;RU=agac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:27:0.276065:4,17:3-4,3-17:13,10,0,3:3,6|4,7:13,2|14,1:202.123:366.612,131.36:0.412766,5.41922:4.18022e-24,6.21541e-06,0.999995	0/1:33:0.338812:4,14:4-4,4-14:22,8,0,3:4,22:7,1|10,1|14,1:200.432:326.675,113.385:0.0,3.25928:0.0,5.07546e-22,1.0
-chr1	7033993	.	TATATATATATA	TATATATATATATATATATATATATATATATATATATA	.	.	END=7034004;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0159096:19,19:1-20,1-20:0,5,0,3:NULL:9,1|12,1|19,1:72.9907:366.612,131.36:5.54252,5.54252:1.41404e-22,0.182165,0.817898	0/0:29:0.998488:6,6:6-6,6-6:13,16,0,0:6,13:NULL:199.889:326.675,113.385:0.0,0.0:8.53176e-25,0.000960543,0.999043
-chr1	7035493	.	CACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACA	.	.	END=7035530;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.876971:17,19:16-18,18-19:9,9,0,12:16,3|17,3|19,3:6,2|7,2|8,1|9,1|11,1|16,1|17,1|18,3:231.892:366.612,131.36:0.693494,0.382696:0.000484166,0.999074,0.000449598	0/0:34:0.607126:19,19:18-19,18-19:14,10,0,10:18,4|19,10:7,1|8,1|10,1|11,2|12,1|13,2|17,1|19,1:245.262:326.675,113.385:0.481803,0.481803:1.87697e-18,0.391868,0.608193
-chr1	7035536	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7035569;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.924009:14,16:14-16,16-16:8,13,0,3:14,3|16,5:5,1|8,1|10,1:182.436:366.612,131.36:0.951732,0.278639:0.996528,0.00347855,1.03467e-06	0/0:33:0.572888:17,17:17-18,17-18:20,10,0,3:16,3|17,14|18,3:5,1|8,1|13,1:222.459:326.675,113.385:0.475866,0.475866:2.53131e-18,0.000967349,0.999036
-chr1	7038709	.	AAATAAATAAAT	AAATAAATAAATAAATAAAT	.	.	END=7038720;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:21:1.0:3,5:3-3,5-5:10,9,0,2:3,7|5,3:5,2:141.417:366.612,131.36:0.0,0.0:1e-45,3.77514e-20,1.0	0/0:8:0.928445:3,3:3-3,3-3:7,1,0,0:3,7:NULL:37.2692:326.675,113.385:0.0,0.0:7.60169e-21,0.0294883,0.970568
-chr1	7038726	.	TAAATAAATAAATAAATAAATAAATAAATAAATAAA	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	.	.	END=7038761;RU=taaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.502446:11,11:8-11,8-11:4,7,0,0:11,4:NULL:80.8551:366.612,131.36:0.630406,0.630406:2.8178e-14,0.129084,0.871013	0/0:9:0.726846:9,9:9-9,9-9:5,2,0,2:9,5:3,1|5,1:53.6287:326.675,113.385:0.0,0.0:5.87215e-13,0.144436,0.855649
-chr1	7039465	.	TATATATATATATATATATATATATATATATA	TATATA,TATATATATATA	.	.	END=7039496;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:14:0.0164109:3,6:1-8,1-8:0,14,0,0:NULL:NULL:142.434:366.612,131.36:2.00357,2.14927:0.721099,0.264067,0.0148589	0/0:14:0.265955:16,16:4-16,4-16:5,5,0,0:16,5:NULL:74.2867:326.675,113.385:3.94882,3.94882:4.58141e-07,0.622396,0.377661
-chr1	7046294	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAATAAATAAAT	.	.	END=7046333;RU=aaat;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.993317:8,8:8-8,8-8:11,19,0,4:8,11:2,1|4,1|5,1|7,1:243.68:366.612,131.36:0.0,0.0:0.998276,0.00172933,1.72211e-26	0/0:54:0.999995:10,10:9-10,9-10:19,23,0,11:10,19:3,1|4,2|6,2|7,1|8,3|9,2:380.597:326.675,113.385:0.236383,0.236383:0.0,1.23677e-05,0.999987
-chr1	7046658	.	AATAAATAAATAAATA	AATA	.	.	END=7046673;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0869115:1,1:1-4,1-4:0,13,0,0:NULL:NULL:133.022:366.612,131.36:1.30693,1.30693:0.464361,0.44253,0.0932569	0/0:26:0.971748:4,4:4-4,4-4:9,17,0,0:4,9:NULL:183.662:326.675,113.385:0.0,0.0:7.18699e-20,0.0220878,0.977957
-chr1	7047632	.	ATTATTATTATT	.	.	.	END=7047643;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.97436:4,4:4-4,4-4:9,12,0,0:4,9:NULL:149.826:366.612,131.36:0.0,0.0:1.857e-26,0.0166801,0.983356	0/0:23:0.999909:4,4:4-4,4-4:17,6,0,0:4,17:NULL:120.143:326.675,113.385:0.0,0.0:0.0,5.72559e-05,0.999942
-chr1	7047891	.	TAATATAATATAATATAATATAATA	TAATATAATATAATATAATATAATATAATATAATA	.	.	END=7047915;RU=taata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998981:7,7:7-8,7-8:14,17,0,4:7,14:3,1|4,1|5,2:245.806:366.612,131.36:0.382696,0.382696:0.0,0.000136251,0.999865	0/0:26:0.997731:5,5:5-5,5-5:12,10,0,4:5,12:2,1|3,1|4,2:170.786:326.675,113.385:0.0,0.0:5.98175e-27,0.00149521,0.998511
-chr1	7050067	.	AAATAAATAAATAAAT	.	.	.	END=7050082;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997876:4,4:4-4,4-4:13,9,0,2:4,13:3,2:150.223:366.612,131.36:0.0,0.0:4.01234e-40,0.000994216,0.999012	0/0:29:0.999941:4,4:2-4,2-4:17,8,0,2:4,17:3,2:157.568:326.675,113.385:0.694341,0.694341:0.0,2.86342e-05,0.999972
-chr1	7052312	.	TTTCTTTCTTTC	.	.	.	END=7052323;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999977:3,3:3-3,3-3:17,19,0,2:3,17:2,2:259.885:366.612,131.36:0.0,0.0:0.0,2.67102e-05,0.999972	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.089:326.675,113.385:0.0,0.0:0.0,9.44406e-08,1.0
-chr1	7068379	.	CCCCCCACCCCCCACCCCCCA	CCCCCCA	.	.	END=7068399;RU=cccccca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.599661:3,3:1-3,1-3:4,7,0,0:3,4:NULL:76.9325:366.612,131.36:0.339533,0.339533:3.80433e-10,0.225051,0.774984	1/1:4:0.0466103:1,1:1-3,1-3:0,3,0,0:NULL:NULL:26.5653:326.675,113.385:0.913899,0.913899:0.162367,0.48561,0.352167
-chr1	7069168	.	TGTGTGTGTGTGTG	TGTGTGTGTGTG,TGTGTGTGTGTGTGTG	.	.	END=7069181;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.734558:6,8:6-8,8-8:20,13,0,0:6,2|8,18:NULL:214.145:366.612,131.36:0.98891,0.0:0.0,0.734637,0.265363	0/0:33:0.999851:7,7:6-7,6-7:16,14,0,2:7,16:6,2:203.023:326.675,113.385:0.345543,0.345543:3.63253e-33,8.08638e-05,0.999919
-chr1	7069209	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7069246;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.583046:19,19:16-20,16-20:5,17,0,3:19,5:9,1|10,1|17,1:203.784:366.612,131.36:1.39016,1.39016:2.35734e-07,0.292289,0.707716	0/0:40:0.993181:19,19:19-19,19-19:15,12,0,12:18,2|19,13:7,1|10,1|11,2|12,1|13,2|15,2|16,1|17,2:271.882:326.675,113.385:0.139319,0.139319:9.11502e-17,0.00584253,0.994173
-chr1	7071018	.	TTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTA	.	.	END=7071053;RU=tta;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999002:10,10:10-10,10-10:13,23,0,11:10,13:4,3|5,1|6,2|7,1|8,1|9,3:339.761:366.612,131.36:0.0,0.0:0.999697,0.00030462,1.39775e-29	0/0:26:0.979369:12,12:12-12,12-12:9,12,0,5:12,9:5,1|9,1|10,1|11,2:189.892:326.675,113.385:0.0,0.0:7.30704e-17,0.0105619,0.989462
-chr1	7072179	.	TTTGTTTGTTTG	.	.	.	END=7072190;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.00001:3,3:3-3,3-3:20,5,0,2:3,20:2,2:136.258:366.612,131.36:0.0,0.0:0.0,3.13871e-06,1.0	0/0:52:1.0:3,3:3-3,3-3:37,15,0,0:3,37:NULL:289.246:326.675,113.385:0.0,0.0:0.0,4.57678e-11,1.0
-chr1	7086512	.	TCCTTCCTTCCT	.	.	.	END=7086523;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:30,27,0,0:3,30:NULL:354.947:366.612,131.36:0.0,0.0:0.0,8.16899e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:19,15,0,0:3,19:NULL:209.826:326.675,113.385:0.0,0.0:0.0,9.0128e-06,0.999994
-chr1	7087714	.	TATATATATATATATATA	TATATA,TATATATATATATATA	.	.	END=7087731;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999984:3,3:3-3,3-3:19,20,0,0:3,19:NULL:257.181:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	2/0:14:0.933757:8,9:8-9,9-9:11,3,0,0:8,3|9,8:NULL:78.6639:326.675,113.385:0.478946,0.0:1.99405e-08,0.934517,0.0655771
-chr1	7088366	.	AAACAAACAAACAAAC	.	.	.	END=7088381;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:27,18,0,3:4,27:2,1|3,2:298.647:366.612,131.36:0.0,0.0:0.0,1.04635e-07,1.0	0/0:34:1.0:4,4:4-4,4-4:23,8,0,2:4,23:2,1|3,1:183.097:326.675,113.385:0.139319,0.139319:0.0,4.63816e-07,1.0
-chr1	7089402	.	AGGAGGAGGAGG	.	.	.	END=7089413;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.999055:4,4:4-4,4-4:14,5,0,0:4,14:NULL:104.682:366.612,131.36:0.0,0.0:0.0,0.000531556,0.99947	0/0:23:0.999212:4,4:4-4,4-4:14,9,0,0:4,14:NULL:136.969:326.675,113.385:0.0,0.0:0.0,0.00055484,0.999447
-chr1	7091385	.	ATCATCATCATCATC	.	.	.	END=7091399;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:22,19,0,3:5,22:3,1|4,2:285.323:366.612,131.36:0.0,0.0:0.0,1.23723e-06,1.0	0/0:25:0.999985:5,5:5-5,5-5:18,7,0,0:5,18:NULL:140.115:326.675,113.385:0.0,0.0:0.0,1.96216e-05,0.99998
-chr1	7091399	.	CACCACCACCACCAC	.	.	.	END=7091413;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:5,5:5-5,5-5:21,18,0,3:5,21:4,3:272.157:366.612,131.36:0.0,0.0:0.0,2.06007e-06,1.0	0/0:24:0.999984:5,5:5-5,5-5:18,6,0,0:5,18:NULL:130.27:326.675,113.385:0.0,0.0:0.0,2.13014e-05,0.999979
-chr1	7097340	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7097369;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.266045:16,21:15-16,15-22:15,13,0,11:15,5|16,10:6,1|7,2|8,2|10,1|11,1|12,1|14,1|15,1|19,1:287.967:366.612,131.36:0.169767,2.39935:2.43486e-36,8.03973e-08,1.0	0/0:34:0.979289:15,15:14-15,14-15:12,12,0,9:14,2|15,10:7,1|9,2|10,1|12,1|13,1|14,2|15,1:238.408:326.675,113.385:0.352842,0.352842:2.76799e-20,0.016334,0.983702
-chr1	7097804	.	ATAATAATAATA	.	.	.	END=7097815;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.996042:4,4:4-4,4-4:12,13,0,0:4,12:NULL:164.437:366.612,131.36:0.0,0.0:3.65495e-28,0.00297296,0.997034	0/0:29:0.999954:4,4:4-4,4-4:17,8,0,4:4,17:3,3|4,1:169.671:326.675,113.385:0.0,0.0:0.0,1.21917e-05,0.999987
-chr1	7099389	.	ATTTATTTATTTATTTATTTATTT	.	.	.	END=7099412;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:6,6:6-6,6-6:26,19,0,3:6,26:2,1|5,2:293.598:366.612,131.36:0.0,0.0:0.0,7.89356e-08,1.0	0/0:26:0.99991:6,6:6-6,6-6:17,6,0,3:6,17:3,2|4,1:150.344:326.675,113.385:0.0,0.0:1.42e-42,5.46034e-05,0.999948
-chr1	7099628	.	TGTGTGTGTGTG	.	.	.	END=7099639;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:6,6:6-6,6-6:33,18,0,6:6,33:4,5|5,1:335.292:366.612,131.36:0.0,0.0:0.0,7.73598e-10,1.0	0/0:73:1.0:6,6:6-7,6-7:49,14,0,9:5,2|6,47:4,3|5,5|7,1:422.624:326.675,113.385:0.431574,0.431574:0.0,5.61873e-11,1.0
-chr1	7099942	.	ATGTATGTATGTATGTATGT	.	.	.	END=7099961;RU=atgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:5,5:5-5,5-5:19,18,0,3:5,19:2,2|4,1:261.311:366.612,131.36:0.0,0.0:0.0,1.01711e-05,0.999993	0/0:68:1.0:5,5:5-5,5-5:35,26,0,7:5,35:2,1|3,2|4,4:429.734:326.675,113.385:0.0,0.0:0.0,9.13639e-11,1.0
-chr1	7101482	.	TTGTTGTTGTTGTTG	.	.	.	END=7101496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999921:5,5:5-5,5-5:17,12,0,3:5,17:3,1|4,2:197.488:366.612,131.36:0.0,0.0:0.0,4.4001e-05,0.999957	0/0:39:1.0:5,5:5-5,5-5:25,11,0,3:5,25:4,3:224.371:326.675,113.385:0.0,0.0:0.0,7.60404e-08,1.0
-chr1	7101721	.	AACAACAACAAC	.	.	.	END=7101732;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:2-4,2-4:25,19,0,2:4,25:3,2:281.334:366.612,131.36:0.569802,0.569802:0.0,2.04694e-07,1.0	0/0:44:1.0:4,4:4-4,4-4:26,15,0,3:4,26:3,3:260.772:326.675,113.385:0.0,0.0:0.0,4.34561e-08,1.0
-chr1	7102309	.	CAACAACAACAACAACAA	.	.	.	END=7102326;RU=caa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.854997:6,6:6-6,6-6:6,17,0,2:6,6:5,2:191.637:366.612,131.36:0.0,0.0:2.48895e-15,0.0832395,0.916856	0/0:25:0.977648:6,6:6-6,6-6:9,14,0,2:6,9:4,1|5,1:178.927:326.675,113.385:0.0,0.0:7.69728e-23,0.0128845,0.987142
-chr1	7112567	.	TGCTTGCTTGCT	.	.	.	END=7112578;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.531923:3,3:1-3,1-3:4,11,0,0:3,4:NULL:119.182:366.612,131.36:0.851255,0.851255:8.10748e-13,0.289411,0.710593	0/0:4:0.610326:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.7523:326.675,113.385:0.0,0.0:3.60438e-13,0.15294,0.847136
-chr1	7112580	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC,TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=7112635;RU=tccc;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:10:0.0426785:10,10:9-12,9-12:0,9,0,0:NULL:NULL:84.7417:366.612,131.36:0.960855,0.960855:0.690324,0.283001,0.0267151	1/1:7:0.0395119:9,9:4-9,4-9:0,1,0,6:NULL:3,2|4,2|7,1|8,1:51.8568:326.675,113.385:1.05556,1.05556:1.0,0.0,0.0
-chr1	7112643	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7112706;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0678086:10,10:8-11,8-11:0,10,0,2:NULL:7,1|10,1:107.562:366.612,131.36:0.725953,0.725953:1.0,0.0,0.0	2/2:4:0.0231414:17,17:11-17,11-17:0,1,0,3:NULL:5,1|16,1|17,1:30.1058:326.675,113.385:2.17123,2.17123:1.44707e-15,0.562026,0.438073
-chr1	7114417	.	TATTTATTTATT	.	.	.	END=7114428;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,11,0,3:3,21:2,3:207.032:366.612,131.36:0.0,0.0:0.0,1.37851e-06,1.0	0/0:29:0.999531:3,3:3-3,3-3:14,12,0,3:3,14:2,3:194.42:326.675,113.385:0.0,0.0:0.0,0.000209233,0.999795
-chr1	7114880	.	GTTTGTTTGTTT	.	.	.	END=7114891;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.99997:3,3:3-3,3-3:18,20,0,0:3,18:NULL:249.412:366.612,131.36:0.0,0.0:0.0,3.72643e-05,0.999964	0/0:51:1.0:3,3:3-3,3-3:39,10,0,2:3,39:2,2:260.0:326.675,113.385:0.0,0.0:0.0,5.14724e-12,1.0
-chr1	7114905	.	TGCCTGCCTGCCTGCCTGCC	.	.	.	END=7114924;RU=tgcc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999735:5,5:5-5,5-5:15,21,0,4:5,15:2,1|3,1|4,2:277.064:366.612,131.36:0.0,0.0:0.0,0.000197653,0.999804	0/0:60:1.0:5,5:5-5,5-5:32,19,0,9:5,32:3,5|4,4:364.328:326.675,113.385:0.0,0.0:0.0,7.61377e-10,1.0
-chr1	7114923	.	CCTTCCTTCCTT	.	.	.	END=7114934;RU=cctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999925:3,3:3-3,3-3:17,18,0,0:3,17:NULL:228.78:366.612,131.36:0.0,0.0:0.0,7.08889e-05,0.999932	0/0:53:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:294.268:326.675,113.385:0.0,0.0:0.0,1.28063e-10,1.0
-chr1	7115852	.	CAACAACAACAA	.	.	.	END=7115863;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.995236:4,4:4-4,4-4:11,29,0,2:4,11:3,1|4,1:335.829:366.612,131.36:0.0,0.0:4.37565e-40,0.00359673,0.996413	0/0:38:1.00001:4,4:4-10,4-10:21,16,0,0:4,21:NULL:229.452:326.675,113.385:2.98215,2.98215:0.0,5.39507e-06,0.999995
-chr1	7115879	.	AACCAACCAACCAACCAACC	.	.	.	END=7115898;RU=aacc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.996785:5,5:5-5,5-5:12,25,0,2:5,12:2,1|4,1:301.208:366.612,131.36:0.0,0.0:4.2689e-36,0.00270055,0.997306	0/0:34:0.999855:5,5:5-5,5-5:16,15,0,3:5,16:2,2|4,1:224.039:326.675,113.385:0.0,0.0:0.0,0.000123741,0.999879
-chr1	7116409	.	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7116432;RU=ttg;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.00001:8,8:8-8,8-8:21,21,0,4:8,21:3,1|4,2|7,1:303.429:366.612,131.36:0.0,0.0:0.0,3.5402e-06,1.0	0/0:38:1.0:8,8:8-8,8-8:20,13,0,5:8,20:5,1|6,3|7,1:239.316:326.675,113.385:0.0,0.0:0.0,4.78065e-06,0.999995
-chr1	7117084	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=7117101;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999899:6,6:6-6,6-6:17,5,0,0:6,17:NULL:115.028:366.612,131.36:0.0,0.0:1e-45,7.1154e-05,0.999932	0/0:30:0.99988:6,6:6-6,6-6:16,11,0,3:6,16:5,3:187.085:326.675,113.385:0.0,0.0:4.64e-43,5.67073e-05,0.999947
-chr1	7117723	.	TTATTTATTTAT	.	.	.	END=7117734;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999944:3,3:3-3,3-3:17,19,0,0:3,17:NULL:241.297:366.612,131.36:0.0,0.0:0.0,4.02304e-05,0.999963	.
-chr1	7123652	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATATATATA	.	.	END=7123683;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0256018:10,10:10-17,10-17:0,12,0,0:NULL:NULL:105.881:366.612,131.36:2.26765,2.26765:0.487018,0.42469,0.0883901	2/2:4:0.0176259:14,14:14-16,14-16:0,2,0,0:NULL:NULL:18.051:326.675,113.385:0.668445,0.668445:0.262568,0.499919,0.237526
-chr1	7123681	.	ATAGATAGATAGATAG	.	.	.	END=7123696;RU=atag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.308041:4,4:1-6,1-6:3,13,0,0:4,3:NULL:127.107:366.612,131.36:1.2509,1.2509:1.57402e-06,0.425549,0.574539	0/0:8:0.467441:4,4:4-4,4-4:3,3,0,2:4,3:3,2:52.7516:326.675,113.385:0.139319,0.139319:7.90252e-07,0.195937,0.804113
-chr1	7127713	.	ATGCATGCATGC	.	.	.	END=7127724;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.998886:3,3:3-3,3-3:13,9,0,0:3,13:NULL:135.151:366.612,131.36:0.0,0.0:4e-45,0.000670271,0.999332	0/0:22:0.999502:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.86:326.675,113.385:0.0,0.0:0.0,0.000298726,0.999704
-chr1	7129508	.	GCCTGCCTGCCT	.	.	.	END=7129519;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.196:366.612,131.36:0.0,0.0:0.0,6.69502e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:188.359:326.675,113.385:0.0,0.0:0.0,8.97093e-07,1.0
-chr1	7129995	.	AGCAGCAGCAGC	.	.	.	END=7130006;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:23,24,0,2:4,23:3,2:327.467:366.612,131.36:0.0,0.0:0.0,7.46945e-07,1.0	0/0:54:1.0:4,4:4-4,4-4:40,14,0,0:4,40:NULL:287.299:326.675,113.385:0.0,0.0:0.0,8.80671e-12,1.0
-chr1	7138899	.	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC,CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	.	.	END=7138976;RU=cctctc;PERIOD=6;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.097887:10,12:10-13,10-13:0,9,0,12:NULL:3,2|4,2|5,1|6,2|7,2|8,1|10,2:167.19:366.612,131.36:1.17651,1.02837:0.410451,0.467083,0.122569	0/0:41:0.611322:13,13:11-13,11-13:4,15,0,22:13,4:3,2|4,5|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2:308.531:326.675,113.385:0.474835,0.474835:6.11111e-08,0.261255,0.738746
-chr1	7139015	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7139054;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.777986:24,24:16-25,16-25:6,14,0,7:24,6:11,1|13,1|18,1|21,2|22,1|23,1:211.599:366.612,131.36:4.19713,4.19713:0.0,0.0157563,0.984278	0/1:52:0.615788:20,22:20-20,19-22:21,16,0,15:19,6|20,15:7,1|9,1|10,1|12,1|14,4|16,1|17,2|19,3|22,1:384.84:326.675,113.385:0.0,1.01136:3.32272e-17,0.000540725,0.999462
-chr1	7139855	.	CAACAACAACAA	.	.	.	END=7139866;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:25,18,0,4:4,25:3,4:286.567:366.612,131.36:0.0,0.0:0.0,1.39598e-07,1.0	0/0:53:1.0:4,4:4-4,4-4:29,22,0,2:4,29:3,2:332.281:326.675,113.385:0.0,0.0:0.0,8.94474e-09,1.0
-chr1	7141910	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7141955;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:68:0.944554:19,19:19-20,19-20:8,31,0,27:19,8:5,1|6,1|7,1|8,1|9,2|10,6|11,2|12,2|13,1|14,2|15,5|19,3:539.829:366.612,131.36:0.358902,0.358902:0.995439,0.00457489,4.49258e-22	0/0:78:0.828414:23,23:20-23,20-23:9,33,0,35:22,2|23,7:5,2|6,2|8,2|9,5|10,2|12,1|13,3|14,9|16,1|18,2|19,2|20,1|21,1|22,1|23,1:617.134:326.675,113.385:1.08749,1.08749:7.09369e-14,0.154714,0.845364
-chr1	7142903	.	TTTATTTATTTA	.	.	.	END=7142914;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999657:3,3:3-3,3-3:15,3,0,0:3,15:NULL:88.4566:366.612,131.36:0.0,0.0:4e-45,0.000127952,0.999873	0/0:25:1.00001:3,3:3-4,3-4:21,3,0,0:3,21:NULL:110.108:326.675,113.385:0.298675,0.298675:0.0,2.16394e-06,1.0
-chr1	7149749	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=7149768;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999981:10,10:10-10,10-10:19,11,0,5:10,19:4,1|6,1|7,1|9,2:217.879:366.612,131.36:0.0,0.0:1.71733e-30,1.14603e-05,0.999988	0/0:61:1.0:10,10:10-10,10-10:33,18,0,9:10,33:5,2|6,2|7,2|9,3:372.271:326.675,113.385:0.0,0.0:0.0,1.25285e-09,1.0
-chr1	7150526	.	CAGCCAGCCAGC	.	.	.	END=7150537;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:217.341:366.612,131.36:0.0,0.0:0.0,2.87344e-06,1.0	0/0:55:1.0:3,3:3-3,3-3:42,13,0,0:3,42:NULL:281.387:326.675,113.385:0.0,0.0:0.0,1.12619e-12,1.0
-chr1	7151580	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7151625;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.907183:22,22:21-23,21-23:13,20,0,7:21,3|22,10:5,1|8,1|10,1|13,1|15,1|17,1|22,1:305.099:366.612,131.36:0.38423,0.38423:0.996535,0.00347349,1.51364e-09	1/0:46:0.948189:22,23:21-23,22-23:10,15,0,21:21,2|22,3|23,5:5,2|7,1|8,1|11,2|12,2|13,2|14,3|15,1|17,1|19,1|20,1|22,4:357.742:326.675,113.385:0.554102,0.317759:0.00154081,0.961704,0.0368281
-chr1	7152237	.	GTTGTTGTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=7152266;RU=gtt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999992:10,10:10-10,10-10:19,15,0,11:10,19:4,2|5,3|7,1|8,2|9,3:308.082:366.612,131.36:0.0,0.0:4.55911e-36,1.42231e-05,0.999987	0/0:42:1.0:10,10:10-10,10-10:24,11,0,7:10,24:3,1|6,1|8,2|9,3:248.698:326.675,113.385:0.0,0.0:0.0,2.10796e-07,1.0
-chr1	7157339	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7157358;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.946256:4,4:1-4,1-4:8,27,0,4:4,8:2,1|3,3:311.435:366.612,131.36:0.5093,0.5093:4.82258e-26,0.0315994,0.968457	0/0:31:0.999938:4,4:4-4,4-4:17,12,0,2:4,17:3,2:192.613:326.675,113.385:0.0,0.0:0.0,4.32609e-05,0.999957
-chr1	7157442	.	TTTTGGTTTTTGGTTTTTGGT	.	.	.	END=7157462;RU=ttttggt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:235.917:366.612,131.36:0.0,0.0:0.0,1.75816e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:175.786:326.675,113.385:0.0,0.0:0.0,8.52949e-06,0.999994
-chr1	7157813	.	CAAACAAACAAACAAA	.	.	.	END=7157828;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999842:4,4:4-4,4-4:16,10,0,3:4,16:3,3:172.962:366.612,131.36:0.0,0.0:0.0,6.26255e-05,0.99994	0/0:52:1.0:4,4:4-4,4-4:23,24,0,5:4,23:3,5:345.664:326.675,113.385:0.0,0.0:0.0,5.28929e-07,1.0
-chr1	7164237	.	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	.	.	END=7164331;RU=tctct;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.0866162:21,21:20-23,20-23:0,17,0,24:NULL:2,2|5,1|6,1|7,3|9,4|10,4|11,1|12,1|13,1|16,1|17,1|18,2|19,1|21,1:332.371:366.612,131.36:1.2242,1.2242:0.0,0.0,1.0	0/0:40:0.134004:19,19:11-19,11-19:2,20,0,17:19,2:3,2|5,1|6,1|7,3|8,1|9,1|10,1|12,1|13,1|14,2|15,2|18,1:316.316:326.675,113.385:2.63675,2.63675:0.000196628,0.75379,0.246027
-chr1	7165649	.	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	.	END=7165672;RU=tttgtt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999941:4,4:4-4,4-4:17,14,0,4:4,17:3,4:228.493:366.612,131.36:0.0,0.0:0.0,3.76231e-05,0.999964	0/0:38:0.997965:4,4:4-4,4-4:11,22,0,5:4,11:3,5:280.981:326.675,113.385:0.0,0.0:2.16762e-36,0.00154586,0.998459
-chr1	7167675	.	TTTGTTTGTTTG	.	.	.	END=7167686;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99977:3,3:3-3,3-3:15,10,0,2:3,15:2,2:168.111:366.612,131.36:0.0,0.0:0.0,9.43e-05,0.999909	0/0:20:0.999928:3,3:3-3,3-3:17,3,0,0:3,17:NULL:92.8925:326.675,113.385:0.0,0.0:0.0,3.49392e-05,0.999964
-chr1	7172621	.	AAAAGAAAAGAAAAG	.	.	.	END=7172635;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:23,16,0,2:3,23:2,2:246.775:366.612,131.36:0.0,0.0:0.0,4.23121e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:30,9,0,2:3,30:2,2:218.999:326.675,113.385:0.0,0.0:0.0,3.21717e-09,1.0
-chr1	7173577	.	ACACACACACAC	.	.	.	END=7173588;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:6,6:6-6,6-6:28,16,0,0:6,28:NULL:253.69:366.612,131.36:0.0,0.0:0.0,2.40619e-08,1.0	0/0:49:1.0:6,6:6-6,6-6:35,13,0,0:6,35:NULL:256.223:326.675,113.385:0.0990099,0.0990099:0.0,3.04857e-10,1.0
-chr1	7179754	.	AATAATAATAATAAT	.	.	.	END=7179768;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999533:5,5:5-5,5-5:14,12,0,3:5,14:3,1|4,2:185.772:366.612,131.36:0.0,0.0:1.8076e-36,0.000174118,0.999827	0/0:26:0.998277:5,5:4-5,4-5:12,11,0,2:5,12:4,2:166.309:326.675,113.385:0.36513,0.36513:2.64615e-31,0.00105222,0.998952
-chr1	7183424	.	AAGAAAGAAAGAAAGA	.	.	.	END=7183439;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999955:4,4:3-4,3-4:16,14,0,4:4,16:2,1|3,3:226.025:366.612,131.36:0.284901,0.284901:0.0,2.46733e-05,0.999978	0/0:48:1.0:4,4:4-4,4-4:35,9,0,3:4,35:2,1|3,2:247.573:326.675,113.385:0.0,0.0:0.0,9.05384e-11,1.0
-chr1	7187849	.	TGTGTGTGTGTGTG	.	.	.	END=7187862;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:7,7:7-8,7-8:20,17,0,0:7,20:NULL:239.511:366.612,131.36:0.284901,0.284901:1.26e-43,8.33049e-06,0.999994	0/0:23:0.999325:7,7:7-7,7-7:14,9,0,0:7,14:NULL:139.81:326.675,113.385:0.0,0.0:6.28781e-31,0.000398072,0.999605
-chr1	7189612	.	AATCAATCAATC	.	.	.	END=7189623;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:32,14,0,2:3,32:2,2:267.131:366.612,131.36:0.0,0.0:0.0,1.29813e-09,1.0	0/0:26:0.999995:3,3:3-4,3-4:19,6,0,0:3,19:NULL:132.971:326.675,113.385:0.382696,0.382696:0.0,1.15177e-05,0.999987
-chr1	7196731	.	GGGTGGGTGGGT	.	.	.	END=7196742;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.259324:3,3:3-6,3-6:2,10,0,0:3,2:NULL:94.8097:366.612,131.36:1.03142,1.03142:3.4255e-06,0.28281,0.717196	0/0:23:0.265731:3,3:2-6,2-6:2,21,0,0:3,2:NULL:186.44:326.675,113.385:0.686818,0.686818:5.23069e-06,0.314433,0.685577
-chr1	7200628	.	TATTTATTTATT	.	.	.	END=7200639;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:2-3,2-3:20,23,0,0:3,20:NULL:284.103:366.612,131.36:0.284901,0.284901:0.0,5.16915e-06,0.999995	0/0:11:0.93621:3,3:3-3,3-3:7,4,0,0:3,7:NULL:63.2243:326.675,113.385:0.0,0.0:1.08546e-20,0.0320985,0.967963
-chr1	7202878	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7202915;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:0.972029:19,19:18-19,18-19:20,22,0,10:18,5|19,15:5,1|6,1|9,1|10,1|12,1|13,2|16,1|17,1|18,1:384.392:366.612,131.36:0.438559,0.438559:6.84937e-17,0.027957,0.972098	0/0:47:0.474592:19,19:19-20,19-20:11,19,0,16:19,9|20,2:4,1|6,1|8,2|9,1|11,4|13,2|16,1|17,2|18,2:353.673:326.675,113.385:0.478127,0.478127:1.97729e-13,0.00220667,0.997799
-chr1	7211598	.	TTAATTAATTAA	.	.	.	END=7211609;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:217.659:366.612,131.36:0.0,0.0:0.0,3.9667e-06,0.999995	0/0:22:0.999911:3,3:3-3,3-3:16,6,0,0:3,16:NULL:121.627:326.675,113.385:0.0,0.0:0.0,5.47336e-05,0.999948
-chr1	7211666	.	TTTATTTATTTA	.	.	.	END=7211677;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:21,17,0,4:3,21:2,4:261.473:366.612,131.36:0.0,0.0:0.0,1.59179e-06,1.0	0/0:40:1.0:3,3:3-3,3-3:22,18,0,0:3,22:NULL:247.566:326.675,113.385:0.0,0.0:0.0,1.2383e-06,1.0
-chr1	7211691	.	ATTGATTGATTG	.	.	.	END=7211702;RU=attg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:41,9,0,3:3,41:2,3:263.741:366.612,131.36:0.0,0.0:0.0,2.13209e-12,1.0	0/0:47:1.0:3,3:3-3,3-3:29,16,0,2:3,29:2,2:269.281:326.675,113.385:0.0,0.0:0.0,6.33694e-09,1.0
-chr1	7217580	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=7217607;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.75922:15,15:13-15,13-15:11,21,0,2:14,3|15,8:7,1|13,1:255.373:366.612,131.36:0.573745,0.573745:2.97386e-18,0.00496799,0.995046	0/0:29:0.860925:14,14:10-15,10-15:7,15,0,4:14,7:6,1|9,1|10,1|12,1:198.8:326.675,113.385:2.02736,2.02736:1.63669e-09,0.0777891,0.922306
-chr1	7219811	.	ACACACACACACACACACACACACACAC	.	.	.	END=7219838;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.561237:14,14:11-15,11-15:12,13,0,3:13,3|14,9:7,1|8,1|11,1:197.929:366.612,131.36:1.20776,1.20776:9.43812e-11,0.436715,0.563388	0/0:38:0.999919:14,14:14-14,14-14:18,8,0,9:14,18:6,1|7,3|8,2|9,2|14,1:222.087:326.675,113.385:0.0990099,0.0990099:1.05852e-33,3.29776e-05,0.99997
-chr1	7226245	.	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	.	.	END=7226304;RU=ggcagg;PERIOD=6;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.558807:9,9:5-9,5-9:5,25,0,7:9,5:3,3|4,1|6,1|8,2:308.032:366.612,131.36:1.05035,1.05035:0.971675,0.0283795,9.27092e-13	0/0:39:0.550706:10,10:3-10,3-10:3,20,0,13:10,3:2,1|3,1|4,2|6,1|7,1|8,3|9,4:288.409:326.675,113.385:1.81796,1.81796:2.69798e-05,0.369363,0.630662
-chr1	7227370	.	AAATAAAATAAAATAAAATAAAATA	.	.	.	END=7227394;RU=aaata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.994263:5,5:5-5,5-5:11,17,0,7:5,11:2,2|3,4|4,1:255.27:366.612,131.36:0.0,0.0:8.55266e-37,0.00397439,0.996036	0/0:37:1.0:5,5:5-5,5-5:23,10,0,4:5,23:3,2|4,2:209.855:326.675,113.385:0.0,0.0:0.0,4.30756e-07,1.0
-chr1	7240279	.	ATTTATTTATTT	.	.	.	END=7240290;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:175.037:366.612,131.36:0.0,0.0:0.0,1.48899e-06,1.0	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:153.32:326.675,113.385:0.0,0.0:0.0,1.07333e-05,0.999993
-chr1	7240750	.	ATGCATGCATGC	.	.	.	END=7240761;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999371:3,3:3-3,3-3:14,14,0,0:3,14:NULL:180.484:366.612,131.36:0.0,0.0:9.596e-42,0.00036374,0.999637	0/0:21:0.997102:3,3:3-3,3-3:12,9,0,0:3,12:NULL:128.833:326.675,113.385:0.0,0.0:1.46053e-35,0.00175663,0.998247
-chr1	7241788	.	TCTCTCTCTCTCTC	.	.	.	END=7241801;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.995579:7,7:7-7,7-7:11,12,0,4:7,11:5,1|6,3:188.603:366.612,131.36:0.0,0.0:5.84163e-25,0.00174596,0.998261	0/0:21:0.99991:7,7:7-7,7-7:17,4,0,0:7,17:NULL:106.626:326.675,113.385:0.0,0.0:1.80641e-38,5.65364e-05,0.999947
-chr1	7245079	.	ATAATAATAATA	.	.	.	END=7245090;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998856:4,4:4-4,4-4:13,13,0,0:4,13:NULL:167.994:366.612,131.36:0.0,0.0:8.78662e-34,0.000611726,0.999392	0/0:21:0.946898:4,4:4-4,4-4:8,13,0,0:4,8:NULL:150.095:326.675,113.385:0.0,0.0:7.85469e-21,0.0389249,0.961143
-chr1	7247751	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7247798;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:51:0.868045:24,25:22-24,22-25:14,20,0,16:22,3|23,3|24,8:6,2|7,1|8,1|9,2|11,1|12,1|13,1|16,1|17,1|18,3|20,1|25,1:402.153:366.612,131.36:0.803751,1.19724:2.11915e-11,0.00923074,0.990791	0/2:31:0.312892:24,29:12-24,12-29:5,11,0,13:24,5:6,2|7,1|8,1|9,1|10,1|12,1|13,2|15,1|19,1|21,1|29,1:231.449:326.675,113.385:4.3687,7.89588:8.50332e-13,1.16424e-06,1.0
-chr1	7253471	.	TAAATAAATAAA	.	.	.	END=7253482;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999982:3,3:3-3,3-3:18,10,0,0:3,18:NULL:163.726:366.612,131.36:0.0,0.0:0.0,2.50208e-05,0.999978	0/0:17:0.995584:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.4252:326.675,113.385:0.0,0.0:3.59897e-33,0.00242419,0.997585
-chr1	7253491	.	ATATATATATATAT	.	.	.	END=7253504;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.998169:7,7:7-7,7-7:13,11,0,0:7,13:NULL:153.192:366.612,131.36:0.0,0.0:3.80595e-25,0.00114606,0.99886	0/0:19:0.999227:7,7:7-7,7-7:14,5,0,0:7,14:NULL:101.671:326.675,113.385:0.0,0.0:1.73846e-27,0.000431609,0.999569
-chr1	7254256	.	CCCACCCACCCA	.	.	.	END=7254267;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:28,17,0,0:3,28:NULL:260.773:366.612,131.36:0.0,0.0:0.0,1.17482e-08,1.0	0/0:22:0.999886:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.393:326.675,113.385:0.0,0.0:0.0,7.30345e-05,0.999926
-chr1	7256849	.	ATTTATTTATTT	.	.	.	END=7256860;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:21,16,0,0:3,21:NULL:233.195:366.612,131.36:0.0,0.0:0.0,4.97224e-06,0.999995	0/0:43:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:241.71:326.675,113.385:0.0,0.0:0.0,1.21702e-08,1.0
-chr1	7260017	.	TATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTAT	.	.	END=7260043;RU=tat;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:0.998782:10,10:7-10,7-10:14,29,0,7:10,14:3,2|5,2|7,1|8,1|9,1:388.096:366.612,131.36:1.06766,1.06766:3.65611e-39,0.000746253,0.999256	0/0:35:0.999432:9,9:9-10,9-10:15,13,0,5:9,15:4,2|6,1|8,2:225.477:326.675,113.385:0.322657,0.322657:6.9475e-26,0.000247089,0.999757
-chr1	7267550	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7267573;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:72:0.991578:12,12:11-12,11-12:33,30,0,8:11,6|12,25|13,2:5,1|6,1|7,1|8,1|11,4:493.028:366.612,131.36:0.452422,0.452422:6.60644e-32,0.00844298,0.991577	0/0:42:0.999214:12,12:11-12,11-12:24,10,0,8:11,3|12,21:7,1|8,1|9,2|10,2|11,2:263.425:326.675,113.385:0.169767,0.169767:3.8886e-28,0.000792244,0.999211
-chr1	7269602	.	TGTTTGTTTGTT	.	.	.	END=7269613;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:3,3:3-3,3-3:36,27,0,0:3,36:NULL:388.619:366.612,131.36:0.0,0.0:0.0,4.76789e-11,1.0	0/0:53:1.0:3,3:3-3,3-3:30,23,0,0:3,30:NULL:328.499:326.675,113.385:0.0,0.0:0.0,1.00681e-08,1.0
-chr1	7269942	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7269983;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:71:0.289082:21,21:21-31,21-31:23,27,0,21:20,2|21,18|22,3:5,1|6,4|7,2|9,1|10,1|11,3|12,1|14,4|15,1|20,1|21,1|29,1:540.445:366.612,131.36:4.00162,4.00162:2.35062e-28,2.28465e-05,0.999979	0/0:58:0.957569:21,21:21-22,21-22:21,21,0,14:19,2|21,16|22,3:4,1|5,2|6,2|7,1|11,2|13,1|14,1|15,2|17,1|18,1:410.119:326.675,113.385:0.480581,0.480581:1.11615e-18,0.00176366,0.99824
-chr1	7281471	.	AGCAGCAGCAGC	.	.	.	END=7281482;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,17,0,0:4,26:NULL:253.314:366.612,131.36:0.0,0.0:0.0,1.49434e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:27,12,0,2:4,27:3,2:231.62:326.675,113.385:0.0,0.0:0.0,4.11805e-08,1.0
-chr1	7281705	.	ACCCACCCACCC	.	.	.	END=7281716;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.921271:3,3:1-3,1-3:8,14,0,0:3,8:NULL:161.358:366.612,131.36:0.339533,0.339533:5.11599e-23,0.0587992,0.941284	0/0:24:0.994423:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.602:326.675,113.385:0.0,0.0:1.21422e-32,0.00349456,0.996513
-chr1	7287856	.	CTGCTGCTGCTG	.	.	.	END=7287867;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.00001:4,4:4-4,4-4:22,31,0,2:4,22:3,2:387.235:366.612,131.36:0.0,0.0:0.0,1.92848e-06,1.0	0/0:49:1.0:4,4:4-4,4-4:28,19,0,2:4,28:3,2:295.475:326.675,113.385:0.0,0.0:0.0,1.55583e-08,1.0
-chr1	7289516	.	AACAACAACAACAACAACAACAAC	.	.	.	END=7289539;RU=aac;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999984:8,8:7-8,7-8:18,22,0,8:8,18:4,1|5,2|7,4|8,1:337.307:366.612,131.36:0.195027,0.195027:0.0,7.08475e-06,0.999994	0/0:64:1.0:8,8:8-8,8-8:32,21,0,10:8,32:4,3|5,2|6,1|7,4:395.626:326.675,113.385:0.0,0.0:0.0,7.39514e-10,1.0
-chr1	7295421	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=7295444;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997089:6,6:6-6,6-6:12,14,0,2:6,12:3,2:198.845:366.612,131.36:0.0,0.0:1.10866e-29,0.00180377,0.998201	0/0:20:0.985667:6,6:6-6,6-6:10,8,0,2:6,10:2,1|3,1:133.664:326.675,113.385:0.0,0.0:8.02214e-25,0.0101885,0.989835
-chr1	7300043	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7300082;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.791622:21,22:21-22,21-22:5,21,0,11:21,2|22,3:5,1|8,2|9,2|16,1|17,1|19,1|20,2|21,1:300.216:366.612,131.36:0.489073,0.253975:2.05885e-32,0.0041394,0.99587	0/3:31:0.271667:20,31:20-21,20-33:5,14,0,11:20,5:7,1|8,2|10,2|11,1|13,1|15,1|16,1|18,1|30,1:249.731:326.675,113.385:0.311527,5.17131:1.2747e-12,9.41717e-07,1.0
-chr1	7308819	.	CTTCCTTCCTTC	.	.	.	END=7308830;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:19,17,0,0:3,19:NULL:235.2:366.612,131.36:0.0,0.0:0.0,8.92855e-06,0.999994	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:176.634:326.675,113.385:0.0,0.0:0.0,5.62191e-06,0.999995
-chr1	7311860	.	AATAAATAAATA	.	.	.	END=7311871;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:243.629:366.612,131.36:0.0,0.0:0.0,1.32772e-06,1.0	0/0:35:1.00001:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.639:326.675,113.385:0.0,0.0:0.0,3.8687e-06,1.0
-chr1	7312335	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7312382;RU=ga;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:40:0.627028:26,27:26-27,26-27:6,19,0,15:26,3|27,3:5,1|6,1|10,1|11,1|12,1|14,1|17,2|18,2|20,1|21,2|24,1|26,1:327.935:366.612,131.36:0.499387,0.270063:1.13217e-27,0.00412896,0.995884	0/0:24:0.366625:24,24:21-25,21-25:4,11,0,7:24,4:4,1|9,1|13,1|19,2|20,2:184.691:326.675,113.385:1.32681,1.32681:3.50187e-05,0.22487,0.775126
-chr1	7317649	.	TATATATATATATATATATATATATATATATATA	TATATATATA	.	.	END=7317682;RU=ta;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00159136:5,5:1-5,1-5:0,4,0,0:NULL:NULL:38.0264:366.612,131.36:1.9367,1.9367:0.214444,0.566663,0.218941	0/0:5:0.214537:17,17:12-17,12-17:3,1,0,0:17,3:NULL:23.9926:326.675,113.385:2.46433,2.46433:0.000415716,0.495034,0.504577
-chr1	7319965	.	TGTTTTGTTTTGTTT	.	.	.	END=7319979;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:32,20,0,3:3,32:2,3:325.88:366.612,131.36:0.0990099,0.0990099:0.0,9.31041e-10,1.0	0/0:38:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.419:326.675,113.385:0.0,0.0:0.0,1.10491e-08,1.0
-chr1	7320026	.	CAACAACAACAA	.	.	.	END=7320037;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:23,25,0,0:4,23:NULL:313.598:366.612,131.36:0.0,0.0:0.0,1.41139e-06,1.0	0/0:45:1.0:4,4:4-4,4-4:35,8,0,2:4,35:3,2:219.811:326.675,113.385:0.0,0.0:0.0,1.13476e-10,1.0
-chr1	7320521	.	TACATACATACA	.	.	.	END=7320532;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999718:3,3:3-3,3-3:15,13,0,4:3,15:2,4:208.139:366.612,131.36:0.0,0.0:0.0,8.72314e-05,0.999917	0/0:24:0.999363:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.282:326.675,113.385:0.0,0.0:0.0,0.000375133,0.999628
-chr1	7321482	.	ACACACACACACAC	.	.	.	END=7321495;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:23,18,0,6:7,23:5,2|6,3|7,1:303.377:366.612,131.36:0.0,0.0:0.0,1.80126e-07,1.0	0/0:36:0.999919:7,7:6-7,6-7:17,16,0,2:7,17:5,1|6,1:226.164:326.675,113.385:0.169767,0.169767:3.24696e-33,4.78734e-05,0.999955
-chr1	7322714	.	CCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTC	.	.	.	END=7322755;RU=cccttc;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.996653:7,7:7-7,7-7:11,11,0,3:7,11:5,1|6,1|7,1:170.747:366.612,131.36:0.0,0.0:3.41976e-34,0.00110666,0.998898	0/0:13:0.961654:7,7:7-11,7-11:9,0,0,3:7,9:3,1|4,2:58.7664:326.675,113.385:1.93776,1.93776:1.54565e-21,0.0115338,0.988493
-chr1	7322758	.	CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	CCCTCCCTCCCTCCCTCCCTCCCTCCCT,CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	.	.	END=7322825;RU=ccct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:20:0.0513381:12,12:7-13,7-13:0,12,0,8:NULL:4,1|5,2|7,1|9,2|10,1|12,1:166.878:366.612,131.36:1.53046,1.53046:1.0,0.0,0.0	1/1:3:0.034616:7,7:4-7,4-7:0,0,0,3:NULL:4,1|5,1|7,1:21.8234:326.675,113.385:1.0297,1.0297:1.0,0.0,0.0
-chr1	7322843	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7322906;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.722905:17,17:17-17,17-17:5,11,0,5:17,5:3,1|8,1|10,1|13,1|15,1:163.352:366.612,131.36:0.0,0.0:5.502e-11,0.0988771,0.901225	0/0:6:0.392285:16,16:16-16,16-16:3,0,0,3:16,3:3,1|5,1|9,1:35.5546:326.675,113.385:0.0,0.0:3.24348e-05,0.308657,0.691323
-chr1	7328752	.	ACCCACCCACCC	.	.	.	END=7328763;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.613872:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6549:366.612,131.36:0.0,0.0:3.22758e-10,0.15496,0.845119	0/0:11:0.757354:3,3:3-3,3-3:5,6,0,0:3,5:NULL:74.6943:326.675,113.385:0.19802,0.19802:2.47669e-12,0.128837,0.871257
-chr1	7336314	.	TTTGTTTGTTTGTTTG	.	.	.	END=7336329;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999524:4,4:4-4,4-4:14,13,0,4:4,14:3,4:202.302:366.612,131.36:0.0,0.0:0.0,0.000197975,0.999804	0/0:42:1.0:4,4:4-4,4-4:23,15,0,4:4,23:3,4:255.565:326.675,113.385:0.0,0.0:0.0,3.73456e-07,1.0
-chr1	7336498	.	TTGCTTGCTTGC	.	.	.	END=7336509;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99571:3,3:3-3,3-3:11,15,0,0:3,11:NULL:182.109:366.612,131.36:0.0,0.0:1.17594e-37,0.00278756,0.997222	0/0:46:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:287.118:326.675,113.385:0.0,0.0:0.0,8.91218e-08,1.0
-chr1	7338572	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7338615;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.421656:26,26:25-27,25-27:5,18,0,10:25,2|26,3:5,2|8,2|11,1|15,1|20,1|21,1|25,1|26,1:269.903:366.612,131.36:0.77215,0.77215:0.0,0.0,1.0	0/0:26:0.775999:22,22:15-23,15-23:9,13,0,2:21,2|22,7:8,1|18,1:187.222:326.675,113.385:3.54718,3.54718:4.10557e-09,0.194642,0.805411
-chr1	7338650	.	GAGAGAGAGAGA	.	.	.	END=7338661;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:199.444:366.612,131.36:0.0,0.0:0.0,7.39755e-06,0.999994	0/0:31:0.677083:6,6:5-6,5-6:16,15,0,0:5,2|6,14:NULL:213.658:326.675,113.385:0.481803,0.481803:3.46657e-31,0.322893,0.677118
-chr1	7339588	.	GGAGGGAGGGAG	.	.	.	END=7339599;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:20,15,0,6:3,20:2,6:258.753:366.612,131.36:0.0,0.0:0.0,1.87913e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.179:326.675,113.385:0.0,0.0:0.0,1.76217e-07,1.0
-chr1	7342098	.	CTTCCTTCCTTC	.	.	.	END=7342109;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:239.784:366.612,131.36:0.0,0.0:0.0,1.00833e-05,0.999993	0/0:27:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:140.672:326.675,113.385:0.0,0.0:0.0,3.06032e-06,1.0
-chr1	7346787	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7346820;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.835079:15,15:15-16,15-16:15,9,0,4:14,2|15,11|16,2:8,1|11,1|13,1|14,1:187.666:366.612,131.36:0.478127,0.478127:0.998868,0.00113628,2.39974e-18	0/2:40:0.820877:17,18:17-17,17-18:14,14,0,11:17,11|18,3:6,1|8,1|9,1|10,1|12,4|16,3:286.675:326.675,113.385:0.0,0.51751:2.57552e-17,0.000174086,0.999827
-chr1	7348276	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	.	END=7348327;RU=ctcc;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.301025:13,13:10-13,10-13:2,18,0,11:13,2:2,1|3,2|5,2|6,2|7,1|11,2|12,1:255.873:366.612,131.36:0.744223,0.744223:4.55782e-05,0.480577,0.519467	0/0:21:0.299182:13,13:6-13,6-13:3,7,0,10:13,3:2,2|4,2|5,1|6,1|7,1|9,3:147.626:326.675,113.385:3.34451,3.34451:3.97709e-07,0.52238,0.477716
-chr1	7358397	.	GAACGAACGAAC	.	.	.	END=7358408;RU=gaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:19,21,0,2:3,19:2,2:283.523:366.612,131.36:0.0,0.0:0.0,7.11925e-06,0.999994	0/0:36:0.999979:3,3:2-3,2-3:18,17,0,0:3,18:NULL:228.634:326.675,113.385:0.382696,0.382696:0.0,2.71399e-05,0.999972
-chr1	7358417	.	GGAGGGAGGGAG	.	.	.	END=7358428;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999972:3,3:3-3,3-3:18,22,0,0:3,18:NULL:271.15:366.612,131.36:0.0,0.0:0.0,2.61653e-05,0.999978	0/0:36:0.999992:3,3:3-3,3-3:18,15,0,3:3,18:2,3:231.967:326.675,113.385:0.0,0.0:0.0,1.52545e-05,0.999986
-chr1	7358698	.	GTGTGTGTGTGTGT	.	.	.	END=7358711;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999251:7,7:6-7,6-7:14,24,0,2:7,14:5,1|6,1:292.536:366.612,131.36:0.253975,0.253975:2.38892e-31,0.000399694,0.999605	0/0:42:1.0:7,7:7-7,7-7:20,19,0,3:7,20:5,3:276.71:326.675,113.385:0.0,0.0:3.9e-44,6.48288e-06,0.999995
-chr1	7360103	.	GCTGGCTGGCTG	.	.	.	END=7360114;RU=gctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:145.701:366.612,131.36:0.0,0.0:0.0,1.49409e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:20,19,0,2:3,20:2,2:266.982:326.675,113.385:0.0,0.0:0.0,8.91998e-06,0.999994
-chr1	7364232	.	AACAACAACAACAACAACAACAACAAC	.	.	.	END=7364258;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.99988:9,9:9-9,9-9:16,18,0,8:9,16:4,2|5,3|6,1|7,1|8,1:294.402:366.612,131.36:0.0,0.0:1e-45,8.34886e-05,0.999918	0/0:37:0.998618:9,9:4-9,4-9:23,4,0,9:8,2|9,21:4,2|5,3|7,1|8,3:207.845:326.675,113.385:1.27865,1.27865:0.0,0.00139733,0.998609
-chr1	7369828	.	TTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGT	.	.	.	END=7369877;RU=ttggt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.988251:10,10:10-10,10-10:9,17,0,11:10,9:3,1|4,2|5,1|6,3|7,1|8,1|9,2:267.282:366.612,131.36:0.0990099,0.0990099:4.56816e-24,0.00662809,0.993385	0/0:42:0.983934:10,10:10-10,10-10:10,17,0,15:10,10:2,1|3,2|4,1|5,4|6,3|8,4:309.264:326.675,113.385:0.0,0.0:4.08607e-26,0.0115998,0.988427
-chr1	7370253	.	TCTATCTATCTATCTATCTATCTATCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7370288;RU=tcta;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999473:9,9:8-9,8-9:15,19,0,5:9,15:2,1|3,1|5,1|7,1|8,1:273.082:366.612,131.36:0.236383,0.236383:8.91454e-31,0.000343567,0.999659	1/1:32:0.987571:10,10:9-10,9-10:10,15,0,6:10,10:3,2|6,1|9,3:229.725:326.675,113.385:0.382696,0.382696:0.0,0.00361669,0.996391
-chr1	7372684	.	GTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7372697;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.992972:7,7:7-7,7-7:11,7,0,0:7,11:NULL:109.451:366.612,131.36:0.0,0.0:1.69996e-23,0.00378935,0.996218	0/1:26:0.275371:7,17:7-7,6-17:20,4,0,2:6,2|7,18:5,1|17,1:155.27:326.675,113.385:0.0,4.95623:4.12548e-36,0.000283499,0.99972
-chr1	7373113	.	AATAATAATAAT	.	.	.	END=7373124;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99978:4,4:4-4,4-4:15,9,0,2:4,15:3,2:162.12:366.612,131.36:0.0,0.0:7.85066e-39,9.29249e-05,0.99991	0/0:20:0.999906:4,4:4-4,4-4:17,3,0,0:4,17:NULL:97.0953:326.675,113.385:0.0,0.0:1.44e-43,6.04494e-05,0.999941
-chr1	7374196	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7374220;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:21,10,0,6:5,21:2,1|4,5:216.13:366.612,131.36:0.0,0.0:0.0,7.71321e-07,1.0	0/0:40:1.0:5,5:5-5,5-5:29,5,0,6:5,29:4,6:207.505:326.675,113.385:0.0,0.0:0.0,5.08972e-09,1.0
-chr1	7375130	.	AAGAAGAAGAAG	.	.	.	END=7375141;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:23,17,0,0:4,23:NULL:243.004:366.612,131.36:0.0,0.0:0.0,1.47844e-06,1.0	0/0:27:0.999994:4,4:3-4,3-4:19,7,0,0:4,19:NULL:139.553:326.675,113.385:0.236383,0.236383:0.0,1.34472e-05,0.999987
-chr1	7377589	.	GTGTGTGTGTGT	.	.	.	END=7377600;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.00001:6,6:6-6,6-6:22,23,0,0:6,22:NULL:305.402:366.612,131.36:0.0,0.0:0.0,2.00292e-06,1.0	0/0:33:0.999991:6,6:6-6,6-6:18,13,0,2:6,18:5,2:200.378:326.675,113.385:0.0,0.0:1e-45,1.50686e-05,0.999986
-chr1	7378672	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7378691;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:5,5:5-5,5-5:22,17,0,2:5,22:3,1|4,1:259.382:366.612,131.36:0.0,0.0:0.0,1.4993e-06,1.0	0/0:27:0.999944:5,5:5-5,5-5:17,7,0,3:5,17:3,1|4,2:158.67:326.675,113.385:0.0,0.0:0.0,2.59651e-05,0.999978
-chr1	7379008	.	GTGTGTGTGTGT	GTGTGTGTGT	.	.	END=7379019;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:1.0:5,6:5-5,6-6:21,15,0,0:4,2|5,11|6,8:NULL:244.131:366.612,131.36:0.0990099,0.220506:2.68448e-10,1.0,1.29073e-16	0/0:37:0.997376:6,6:2-6,2-6:22,11,0,2:5,2|6,20:4,1|5,1:210.677:326.675,113.385:1.55789,1.55789:2.05557e-35,0.00263789,0.997368
-chr1	7379032	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACA	.	.	END=7379059;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999806:13,13:13-13,13-13:25,16,0,5:12,3|13,22:8,3|10,1|11,1:304.336:366.612,131.36:0.0,0.0:1.0,1.76595e-06,4.13362e-22	0/0:39:0.999089:14,14:10-14,10-14:22,10,0,6:13,3|14,19:6,1|7,1|8,1|10,2|11,1:238.742:326.675,113.385:1.24776,1.24776:1.8e-21,0.000919131,0.999082
-chr1	7382087	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7382106;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.996054:4,4:4-4,4-4:10,24,0,3:4,10:3,3:276.813:366.612,131.36:0.0,0.0:1.88766e-33,0.00203106,0.997974	0/0:19:0.993888:4,4:4-4,4-4:11,8,0,0:4,11:NULL:112.713:326.675,113.385:0.0,0.0:4.26474e-36,0.00449055,0.995522
-chr1	7384157	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=7384198;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:66:0.746841:22,23:22-22,21-23:13,30,0,22:21,2|22,8|23,3:5,1|6,1|7,1|9,1|10,2|11,1|14,2|15,2|16,4|18,2|20,2|21,1|22,2:518.97:366.612,131.36:0.139319,0.664031:3.11801e-38,7.10975e-05,0.999932	0/1:53:0.746418:21,22:21-21,21-22:16,17,0,18:21,12|22,4:5,1|6,2|9,1|10,1|11,1|12,2|13,3|14,1|16,2|18,2|20,2:378.127:326.675,113.385:0.0,0.538126:1.12812e-15,9.63829e-05,0.999903
-chr1	7385475	.	CAACAACAACAA	.	.	.	END=7385486;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:29,17,0,3:4,29:4,3:300.122:366.612,131.36:0.0,0.0:0.0,1.86986e-09,1.0	0/0:31:0.99995:4,4:4-5,4-5:17,8,0,5:4,17:3,3|4,2:177.236:326.675,113.385:0.412766,0.412766:0.0,6.88485e-06,0.999994
-chr1	7385514	.	AAAACAAAACAAAAC	.	.	.	END=7385528;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:27,17,0,0:3,27:NULL:267.996:366.612,131.36:0.0,0.0:0.0,6.51147e-08,1.0	0/0:28:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:141.849:326.675,113.385:0.0,0.0:0.0,1.66293e-06,1.0
-chr1	7385949	.	ACAAAACAAAACAAAACAAA	.	.	.	END=7385968;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.998894:4,4:4-4,4-4:15,16,0,0:4,15:NULL:215.301:366.612,131.36:0.0,0.0:0.0,0.000847047,0.999157	0/0:29:1.0:4,4:4-4,4-4:21,8,0,0:4,21:NULL:161.162:326.675,113.385:0.0,0.0:0.0,5.3986e-06,0.999995
-chr1	7386148	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7386177;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.45196:15,27:15-15,15-27:19,14,0,10:14,3|15,16:4,2|8,2|9,1|10,2|11,1|14,1|27,1:319.729:366.612,131.36:0.0,5.81499:1.70628e-20,6.75452e-05,0.999933	0/0:31:0.990378:15,15:15-15,15-15:11,9,0,10:15,11:4,2|8,1|9,1|10,1|12,1|13,3|14,1:210.515:326.675,113.385:0.139319,0.139319:1.95257e-14,0.00320105,0.996807
-chr1	7389238	.	AAAACAAAACAAAAC	.	.	.	END=7389252;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999582:3,3:3-3,3-3:14,21,0,3:3,14:2,3:266.595:366.612,131.36:0.0,0.0:0.0,0.000228812,0.999773	0/0:20:0.996706:3,3:3-3,3-3:11,6,0,3:3,11:2,3:117.808:326.675,113.385:0.0,0.0:3.58095e-38,0.00114915,0.998854
-chr1	7389561	.	AACAACAACAAC	.	.	.	END=7389572;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.986302:4,4:4-4,4-4:10,16,0,0:4,10:NULL:184.473:366.612,131.36:0.0,0.0:3.2027e-33,0.00898798,0.991031	0/0:8:0.572521:4,4:4-4,4-4:4,4,0,0:4,4:NULL:50.0009:326.675,113.385:0.29703,0.29703:1.07314e-13,0.254933,0.745076
-chr1	7390007	.	ACACACACACAC	.	.	.	END=7390018;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:28,8,0,4:6,28:4,2|5,2:213.884:366.612,131.36:0.0,0.0:0.0,1.5855e-08,1.0	0/0:12:0.956369:6,6:6-6,6-6:8,4,0,0:6,8:NULL:64.5737:326.675,113.385:0.0,0.0:3.70441e-17,0.0228166,0.97723
-chr1	7390525	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7390544;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:23,13,0,2:4,23:3,2:218.835:366.612,131.36:0.0,0.0:0.0,4.33981e-07,1.0	0/0:19:0.998138:4,4:4-4,4-4:12,5,0,2:4,12:3,2:102.812:326.675,113.385:0.0,0.0:4.38078e-36,0.000734944,0.99927
-chr1	7391902	.	AAACAAACAAAC	.	.	.	END=7391913;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.95787:3,3:3-3,3-3:8,9,0,0:3,8:NULL:117.574:366.612,131.36:0.0,0.0:1.6678e-25,0.0217778,0.978265	0/0:9:0.454772:3,3:1-3,1-3:3,6,0,0:3,3:NULL:64.9642:326.675,113.385:0.390054,0.390054:2.83571e-10,0.286577,0.713424
-chr1	7392178	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=7392205;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.989337:13,13:13-15,13-15:18,15,0,5:13,16|14,2:7,1|8,1|9,1|11,1|12,1:258.558:366.612,131.36:0.655861,0.655861:0.989359,0.0106623,1.70261e-14	0/0:32:0.745438:14,14:13-14,13-14:14,12,0,6:13,3|14,11:5,1|6,1|9,1|10,2|11,1:220.514:326.675,113.385:0.469019,0.469019:1.61047e-11,0.254054,0.745954
-chr1	7392363	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7392394;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.990618:8,8:8-8,8-8:12,12,0,2:8,12:3,1|6,1:179.708:366.612,131.36:0.0,0.0:9.96931e-33,0.00644949,0.993565	0/1:30:0.293661:8,12:8-8,8-12:18,6,0,6:8,18:4,1|7,3|8,1|11,1:185.442:326.675,113.385:0.0,1.79249:0.0,1.26003e-08,1.0
-chr1	7393303	.	TAAATAAATAAATAAA	.	.	.	END=7393318;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.945166:4,4:4-4,4-4:9,14,0,0:4,9:NULL:164.952:366.612,131.36:0.0,0.0:8.62914e-26,0.0447158,0.955357	0/0:5:0.572755:4,4:4-4,4-4:4,1,0,0:4,4:NULL:24.6243:326.675,113.385:0.0,0.0:2.61914e-12,0.227011,0.773022
-chr1	7395935	.	TATATTATATTATAT	.	.	.	END=7395949;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.987288:3,3:3-3,3-3:9,6,0,2:3,9:2,2:104.632:366.612,131.36:0.0,0.0:1.594e-26,0.00461756,0.995394	0/0:12:0.990461:3,3:3-3,3-3:10,2,0,0:3,10:NULL:56.8744:326.675,113.385:0.0,0.0:3.51705e-29,0.00420052,0.995809
-chr1	7397361	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7397400;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:38:0.731255:21,22:21-23,21-23:8,16,0,12:21,6|22,2:4,1|6,1|7,1|8,2|9,2|10,1|17,1|19,2|20,1:279.421:366.612,131.36:0.382183,0.782491:3.14671e-23,0.00209191,0.997913	0/0:29:0.904946:20,20:19-21,19-21:7,10,0,10:20,7:6,1|7,1|8,1|9,2|18,4|19,1:201.872:326.675,113.385:0.424474,0.424474:6.32146e-09,0.0305788,0.969479
-chr1	7398005	.	CCCGCCCGCCCG	.	.	.	END=7398016;RU=cccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:23,13,0,0:3,23:NULL:211.852:366.612,131.36:0.0,0.0:0.0,8.05988e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.369:326.675,113.385:0.0,0.0:0.0,3.3594e-07,1.0
-chr1	7399995	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=7400022;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.99992:7,7:7-7,7-7:17,18,0,2:7,17:4,1|6,1:252.317:366.612,131.36:0.0,0.0:8.398e-42,6.27518e-05,0.99994	0/0:29:0.999872:7,7:2-7,2-7:16,7,0,5:7,16:2,1|3,1|4,1|6,2:168.405:326.675,113.385:2.26211,2.26211:6.47696e-40,7.5926e-05,0.999926
-chr1	7400995	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7401018;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999799:6,6:5-6,5-6:15,15,0,5:6,15:3,1|4,2|5,2:236.311:366.612,131.36:0.284901,0.284901:1.1652e-41,9.16741e-05,0.99991	0/0:53:1.0:6,6:6-6,6-6:26,16,0,11:6,26:2,1|3,5|4,3|5,2:331.38:326.675,113.385:0.0,0.0:0.0,5.8558e-08,1.0
-chr1	7401260	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7401291;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.999134:15,15:15-15,15-15:25,13,0,7:14,3|15,20|16,2:4,1|7,1|9,2|11,1|12,1|13,1:297.301:366.612,131.36:0.139319,0.139319:0.99925,0.000751175,7.51773e-16	0/0:55:1.0:16,16:16-16,16-16:31,17,0,6:15,3|16,28:7,1|11,2|12,1|13,1|15,1:351.031:326.675,113.385:0.0,0.0:5.42445e-32,1.93846e-06,1.0
-chr1	7403154	.	ATTTATTTATTT	.	.	.	END=7403165;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:30,18,0,0:3,30:NULL:285.884:366.612,131.36:0.0,0.0:0.0,6.03542e-09,1.0	0/0:30:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:138.461:326.675,113.385:0.0,0.0:0.0,7.52932e-08,1.0
-chr1	7403493	.	ACACACACACACACAC	.	.	.	END=7403508;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:8,8:8-8,8-8:23,21,0,5:8,23:4,1|5,1|6,1|7,2:333.163:366.612,131.36:0.0,0.0:1.72e-43,7.76178e-07,1.0	0/0:33:0.99689:8,8:8-9,8-9:12,16,0,4:8,12:5,2|6,2:226.827:326.675,113.385:0.334882,0.334882:4.59965e-23,0.0016035,0.998404
-chr1	7403509	.	CCACCACCACCACCACCACCA	.	.	.	END=7403529;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:7,7:7-7,7-7:21,19,0,0:7,21:NULL:268.328:366.612,131.36:0.0,0.0:0.0,1.092e-05,0.999993	0/0:31:0.99736:7,7:7-7,7-7:12,15,0,4:7,12:4,2|5,2:216.079:326.675,113.385:0.0,0.0:2.04253e-36,0.00152758,0.998475
-chr1	7403538	.	AAATAAATAAAT	.	.	.	END=7403549;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:279.211:366.612,131.36:0.0,0.0:0.0,1.52631e-06,1.0	0/0:26:0.999353:3,3:3-3,3-3:14,12,0,0:3,14:NULL:167.036:326.675,113.385:0.0,0.0:1.7057e-41,0.000411744,0.999591
-chr1	7407348	.	TAATAATAATAATAATAA	.	.	.	END=7407365;RU=taa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:6,6:6-6,6-6:27,20,0,0:6,27:NULL:286.472:366.612,131.36:0.0,0.0:0.0,8.2752e-08,1.0	0/0:36:0.999988:6,6:5-6,5-6:18,12,0,5:6,18:4,2|5,3:225.568:326.675,113.385:0.195027,0.195027:1.25e-43,9.64497e-06,0.999993
-chr1	7407486	.	TATATATATATA	.	.	.	END=7407497;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999744:6,6:6-6,6-6:16,11,0,0:6,16:NULL:166.769:366.612,131.36:0.0,0.0:4.11278e-28,0.000193897,0.99981	0/0:23:0.987407:6,6:6-6,6-6:10,13,0,0:6,10:NULL:161.381:326.675,113.385:0.0,0.0:6.72984e-18,0.00804479,0.991974
-chr1	7407553	.	ACACACACACAC	.	.	.	END=7407564;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:6,6:6-6,6-6:23,9,0,2:6,23:5,2:189.028:366.612,131.36:0.0,0.0:0.0,4.76762e-07,1.0	0/0:33:1.0:6,6:6-6,6-6:25,7,0,0:6,25:NULL:165.558:326.675,113.385:0.0,0.0:0.0,1.80849e-07,1.0
-chr1	7409238	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7409277;RU=aaaac;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999948:8,8:8-8,8-8:17,13,0,13:8,17:3,1|4,4|5,1|6,2|7,5:276.522:366.612,131.36:0.0,0.0:1.2e-43,2.10434e-05,0.999979	0/0:21:0.982309:8,8:7-8,7-8:9,3,0,8:8,9:3,1|4,3|6,1|7,3:120.301:326.675,113.385:0.45695,0.45695:1.97341e-23,0.00575558,0.994257
-chr1	7410953	.	AGAAGAAGAAGA	.	.	.	END=7410964;RU=aga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997912:4,4:4-4,4-4:13,15,0,0:4,13:NULL:186.244:366.612,131.36:0.0,0.0:5.88746e-31,0.00152302,0.998481	0/0:29:0.998108:4,4:4-4,4-4:13,16,0,0:4,13:NULL:196.156:326.675,113.385:0.0,0.0:4.49557e-31,0.00144172,0.998564
-chr1	7416243	.	ATTTATTTATTT	.	.	.	END=7416254;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:216.436:366.612,131.36:0.0,0.0:0.0,1.14461e-06,1.0	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.715:326.675,113.385:0.0,0.0:0.0,4.6248e-07,1.0
-chr1	7421873	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7421914;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.998197:21,21:21-23,21-23:14,18,0,11:21,14:6,1|7,3|12,2|15,1|19,2|20,2:324.695:366.612,131.36:0.670934,0.670934:5.09017e-16,0.000522917,0.999478	0/0:38:0.686723:21,21:20-22,20-22:5,16,0,15:21,5:4,1|8,1|9,1|10,2|11,1|14,2|15,1|16,1|17,1|18,1|19,1|20,2:290.947:326.675,113.385:0.626507,0.626507:4.14178e-06,0.120716,0.879379
-chr1	7423553	.	TGGGTTGGGTTGGGT	.	.	.	END=7423567;RU=tgggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:28,13,0,2:3,28:2,1|3,1:245.609:366.612,131.36:0.0,0.0:0.0,6.4823e-09,1.0	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.697:326.675,113.385:0.0,0.0:0.0,2.56633e-06,1.0
-chr1	7423835	.	CCAGCCAGCCAG	.	.	.	END=7423846;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998069:3,3:3-3,3-3:12,18,0,0:3,12:NULL:213.338:366.612,131.36:0.0,0.0:2.9623e-41,0.00101561,0.99899	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.014:326.675,113.385:0.0,0.0:0.0,8.03606e-06,0.999994
-chr1	7424052	.	ATATATATATATAT	.	.	.	END=7424065;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.982641:7,7:6-8,6-8:10,7,0,0:7,10:NULL:108.711:366.612,131.36:0.466294,0.466294:2.7639e-16,0.0114908,0.988532	0/0:25:0.998037:7,7:6-8,6-8:13,10,0,0:7,13:NULL:137.626:326.675,113.385:0.344122,0.344122:1.78319e-21,0.00109507,0.998907
-chr1	7425278	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7425323;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.94803:23,23:21-24,21-24:9,16,0,16:23,9:8,1|9,2|10,2|11,1|12,1|13,1|15,1|17,2|20,1|21,1|22,3:322.991:366.612,131.36:0.570833,0.570833:8.83532e-11,0.0119463,0.988078	0/0:63:0.513251:23,23:21-27,21-27:20,24,0,18:21,3|22,4|23,11|24,2:5,4|9,1|10,1|11,3|14,2|15,4|19,1|20,2:473.466:326.675,113.385:1.61365,1.61365:3.31356e-10,0.476846,0.523247
-chr1	7426578	.	TCTTTCTTTCTT	.	.	.	END=7426589;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999873:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.935:366.612,131.36:0.0,0.0:0.0,7.34154e-05,0.999926	0/0:12:0.924749:3,3:3-3,3-3:7,5,0,0:3,7:NULL:72.4247:326.675,113.385:0.0,0.0:1.24085e-20,0.0349296,0.965131
-chr1	7426730	.	TATATATATATATATATATATATATATATATATATATATATATATATA	TA	.	.	END=7426777;RU=ta;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0256329:1,1:1-1,1-1:0,14,0,0:NULL:NULL:123.961:366.612,131.36:0.0,0.0:0.866772,0.131153,0.00217551	1/1:4:0.00195412:1,1:1-1,1-1:0,4,0,0:NULL:NULL:34.6221:326.675,113.385:0.0,0.0:0.371713,0.539518,0.0888731
-chr1	7431725	.	ATTATTATTATT	.	.	.	END=7431736;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999499:4,4:4-4,4-4:14,11,0,4:4,14:3,4:187.286:366.612,131.36:0.0,0.0:7.8315e-37,0.000191455,0.999811	0/0:35:1.0:4,4:4-4,4-4:26,9,0,0:4,26:NULL:183.414:326.675,113.385:0.0,0.0:0.0,1.08437e-07,1.0
-chr1	7440876	.	TTCCTTCCTTCC	.	.	.	END=7440887;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:213.709:366.612,131.36:0.0,0.0:0.0,4.1056e-09,1.0	0/0:40:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:249.022:326.675,113.385:0.0,0.0:0.0,1.88782e-06,1.0
-chr1	7440950	.	AAACAAACAAAC	.	.	.	END=7440961;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:155.473:366.612,131.36:0.0,0.0:0.0,7.67418e-08,1.0	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:221.718:326.675,113.385:0.0,0.0:0.0,7.89085e-06,0.999994
-chr1	7444083	.	ATATATATATATAT	.	.	.	END=7444096;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.515785:7,7:6-8,6-8:4,9,0,0:7,4:NULL:101.366:366.612,131.36:0.820887,0.820887:1.31889e-07,0.297634,0.702376	0/0:10:0.952448:7,7:7-7,7-7:8,2,0,0:7,8:NULL:49.8835:326.675,113.385:0.0,0.0:2.21982e-14,0.0249351,0.975111
-chr1	7447332	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7447355;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:6,6:6-6,6-6:29,25,0,5:6,29:3,4|4,1:381.561:366.612,131.36:0.0,0.0:0.0,1.29042e-08,1.0	0/0:39:1.0:6,6:6-6,6-6:27,7,0,5:6,27:2,2|3,1|4,1|5,1:210.645:326.675,113.385:0.0,0.0:0.0,4.00341e-08,1.0
-chr1	7449579	.	TCTGTCTCTGTCTCTGTCTCTGTC	.	.	.	END=7449602;RU=tctgtc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:323.571:366.612,131.36:0.0,0.0:0.0,7.14102e-07,1.0	0/0:29:0.999342:4,4:3-4,3-4:15,13,0,0:4,15:NULL:180.716:326.675,113.385:0.311527,0.311527:6e-45,0.000577142,0.999424
-chr1	7450712	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7450769;RU=tc;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.325423:26,26:10-26,10-26:6,14,0,10:25,2|26,4:6,1|8,2|9,1|12,1|15,2|17,2|18,1:238.154:366.612,131.36:6.80582,6.80582:0.989552,0.0104685,2.18193e-10	2/2:20:0.0285637:32,32:25-32,25-32:0,7,0,9:NULL:4,2|5,1|8,1|13,1|27,2|28,1|32,1:141.607:326.675,113.385:1.50058,1.50058:9.70053e-09,0.34967,0.650364
-chr1	7453756	.	AGCAGCAGCAGC	.	.	.	END=7453767;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:286.722:366.612,131.36:0.0,0.0:0.0,3.87272e-09,1.0	0/0:44:1.0:4,4:4-4,4-4:27,17,0,0:4,27:NULL:265.752:326.675,113.385:0.0,0.0:0.0,1.23179e-07,1.0
-chr1	7456598	.	TTTATTTATTTA	.	.	.	END=7456609;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:269.69:366.612,131.36:0.0,0.0:0.0,2.51275e-07,1.0	0/0:34:0.999931:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.423:326.675,113.385:0.0,0.0:0.0,6.4736e-05,0.999939
-chr1	7460799	.	ATTTATTTATTT	.	.	.	END=7460810;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:37,23,0,0:3,37:NULL:352.908:366.612,131.36:0.0,0.0:0.0,7.23043e-11,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.937:326.675,113.385:0.0,0.0:0.0,6.82864e-07,1.0
-chr1	7461208	.	CACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACA	.	.	END=7461233;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:69:0.902457:19,19:6-20,6-20:21,29,0,18:16,2|18,3|19,14|20,2:5,1|7,1|8,2|11,3|14,2|16,4|17,4|18,1:531.308:366.612,131.36:4.86734,4.86734:0.0,2.49675e-08,1.0	0/0:62:0.99988:13,13:4-13,4-13:29,18,0,13:12,4|13,25:5,1|6,2|7,1|8,1|9,2|10,3|11,1|12,1|13,1:406.177:326.675,113.385:2.43794,2.43794:8.67065e-38,0.000120026,0.99988
-chr1	7466892	.	TAAATAAATAAA	.	.	.	END=7466903;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:20,10,0,3:3,20:2,2|3,1:193.314:366.612,131.36:0.0,0.0:0.0,2.12392e-06,1.0	0/0:24:0.999881:3,3:3-3,3-3:16,8,0,0:3,16:NULL:134.134:326.675,113.385:0.0,0.0:0.0,7.06065e-05,0.999933
-chr1	7466980	.	AAAGTTTAAAGTTTAAAGTTT	.	.	.	END=7467000;RU=aaagttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:230.609:366.612,131.36:0.0,0.0:0.0,5.97646e-06,0.999995	0/0:19:0.999723:3,3:3-3,3-3:15,4,0,0:3,15:NULL:96.7021:326.675,113.385:0.0,0.0:0.0,0.000150997,0.99985
-chr1	7468038	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC,TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=7468113;RU=tttc;PERIOD=4;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.0273217:21,21:17-23,17-23:0,12,0,15:NULL:3,2|4,1|5,1|8,1|9,2|10,3|13,1|15,2|19,1|21,1:217.9:366.612,131.36:2.02262,2.02262:5.75985e-16,0.383764,0.616294	1/1:25:0.020238:16,16:7-19,7-19:0,7,0,13:NULL:7,2|10,1|11,2|12,5|13,1|14,1|16,1:158.469:326.675,113.385:3.56232,3.56232:0.312801,0.5122,0.175013
-chr1	7468830	.	AAAACAAAACAAAAC	.	.	.	END=7468844;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999744:3,3:3-3,3-3:15,16,0,2:3,15:2,2:222.579:366.612,131.36:0.0,0.0:0.0,0.00017591,0.999826	0/0:24:0.999755:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.313:326.675,113.385:0.0,0.0:0.0,0.00016387,0.999841
-chr1	7469326	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7469375;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:53:0.532474:25,30:19-27,19-31:10,24,0,17:19,2|25,6|27,2:4,1|7,2|8,2|9,3|12,1|13,1|16,1|18,1|19,1|22,1|26,2|30,1:423.149:366.612,131.36:1.50195,2.63117:3.63299e-29,2.26825e-07,1.0	0/0:50:0.984792:25,25:20-27,20-27:11,23,0,12:25,11:6,2|7,2|9,1|13,1|14,2|18,1|19,2|25,1:366.528:326.675,113.385:1.77125,1.77125:1.29155e-26,0.00944488,0.990575
-chr1	7469376	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7469415;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.287036:16,19:16-16,16-19:7,20,0,17:16,7:4,1|6,2|8,2|9,1|10,4|11,1|15,5|18,1:349.347:366.612,131.36:0.19802,1.12645:0.566,0.434096,8.58628e-15	0/0:52:0.920153:20,20:20-20,20-20:7,24,0,21:20,7:5,2|6,1|7,4|8,1|9,1|10,1|11,2|12,2|14,2|15,2|16,1|18,1|19,1:420.393:326.675,113.385:0.0,0.0:4.29867e-09,0.0449381,0.955134
-chr1	7473898	.	AAACAAACAAAC	.	.	.	END=7473909;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.259:366.612,131.36:0.0,0.0:0.0,7.52061e-07,1.0	0/0:25:0.999257:3,3:3-3,3-3:14,11,0,0:3,14:NULL:154.952:326.675,113.385:0.0,0.0:9.73e-43,0.000477853,0.999523
-chr1	7475210	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=7475227;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.878:366.612,131.36:0.0,0.0:0.0,1.86616e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:177.338:326.675,113.385:0.0,0.0:0.0,3.60068e-07,1.0
-chr1	7475765	.	TATTATTATTAT	.	.	.	END=7475776;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.997794:4,4:4-4,4-4:12,15,0,0:4,12:NULL:188.056:366.612,131.36:0.0,0.0:1.78865e-40,0.00138378,0.998619	0/0:17:0.993907:4,4:4-4,4-4:11,6,0,0:4,11:NULL:98.0058:326.675,113.385:0.0,0.0:7.5814e-37,0.00390186,0.99611
-chr1	7482108	.	TTTTTTGTTTTTTGTTTTTTGTTTTTTG	TTTTTTGTTTTTTGTTTTTTG	.	.	END=7482135;RU=ttttttg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.0593018:3,3:3-3,3-3:0,0,0,4:NULL:3,4:26.8546:366.612,131.36:0.0,0.0:0.0740912,0.397935,0.528156	0/0:25:0.999114:4,4:4-4,4-4:13,7,0,5:4,13:2,1|3,4:149.54:326.675,113.385:0.0,0.0:3.87466e-38,0.000414173,0.99959
-chr1	7482227	.	ACCCACCCACCC	.	.	.	END=7482238;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.783895:3,3:3-3,3-3:5,14,0,0:3,5:NULL:136.395:366.612,131.36:0.0,0.0:3.03597e-14,0.117362,0.882742	0/0:26:0.951091:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.78:326.675,113.385:0.19802,0.19802:4.98595e-22,0.0337134,0.966351
-chr1	7492065	.	GGAGGGAGGGAG	.	.	.	END=7492076;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:214.218:366.612,131.36:0.0,0.0:0.0,4.3342e-07,1.0	0/0:30:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:154.508:326.675,113.385:0.0,0.0:0.0,5.77157e-07,1.0
-chr1	7493936	.	TAAATAAATAAATAAA	.	.	.	END=7493951;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:189.401:366.612,131.36:0.0,0.0:0.0,4.13945e-07,1.0	0/0:23:0.999022:4,4:4-4,4-4:13,6,0,4:4,13:3,4:131.793:326.675,113.385:0.0,0.0:1.34938e-38,0.000363209,0.999637
-chr1	7495072	.	AAAATAAAATAAAAT	.	.	.	END=7495086;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999951:3,3:3-3,3-3:18,22,0,0:3,18:NULL:271.354:366.612,131.36:0.0,0.0:0.0,4.36311e-05,0.999957	0/0:35:0.999969:3,3:3-3,3-3:18,17,0,0:3,18:NULL:232.209:326.675,113.385:0.0,0.0:0.0,3.56805e-05,0.999964
-chr1	7497345	.	CAAACAAACAAA	.	.	.	END=7497356;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,22,0,0:3,24:NULL:292.966:366.612,131.36:0.0,0.0:0.0,5.38177e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.094:326.675,113.385:0.0,0.0:0.0,2.8124e-06,1.0
-chr1	7500168	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=7500193;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:17:0.59259:13,14:12-14,12-14:5,11,0,0:13,2|14,3:NULL:130.067:366.612,131.36:0.742244,0.868696:1.86284e-05,0.116728,0.88336	1/2:16:0.419391:12,14:12-13,12-14:9,7,0,0:12,3|13,3|14,3:NULL:116.493:326.675,113.385:0.538126,0.588255:0.000815859,0.579807,0.419465
-chr1	7502120	.	ACACACACACACAC	.	.	.	END=7502133;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:75:1.0:7,7:7-7,7-7:41,30,0,3:7,39|8,2:4,1|5,1|6,1:478.922:366.612,131.36:0.0,0.0:0.0,6.18289e-12,1.0	0/0:50:0.999841:7,7:6-7,6-7:28,19,0,3:6,3|7,25:4,1|5,2:329.444:326.675,113.385:0.253975,0.253975:0.0,0.000161628,0.999841
-chr1	7507479	.	TTTTAAATTTTAAATTTTAAA	.	.	.	END=7507499;RU=ttttaaa;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999978:3,3:3-3,3-3:18,10,0,0:3,18:NULL:168.716:366.612,131.36:0.0,0.0:0.0,2.90937e-05,0.999972	0/0:22:0.997651:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.947:326.675,113.385:0.0,0.0:1.18906e-35,0.00174143,0.998262
-chr1	7512509	.	TAAATAAATAAA	.	.	.	END=7512520;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998885:3,3:3-3,3-3:13,13,0,0:3,13:NULL:173.123:366.612,131.36:0.0,0.0:3.62e-43,0.00064395,0.999361	0/0:18:0.995942:3,3:3-3,3-3:11,7,0,0:3,11:NULL:105.003:326.675,113.385:0.0,0.0:1.63034e-36,0.00216985,0.997837
-chr1	7518438	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7518481;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.889935:19,19:19-19,19-19:7,6,0,11:19,7:7,2|8,3|12,1|13,1|18,4:174.41:366.612,131.36:0.0,0.0:0.985099,0.0149306,8.37e-15	0/0:34:0.769607:22,22:21-22,21-22:9,11,0,14:21,2|22,7:5,2|6,1|7,1|11,2|12,1|13,2|14,1|15,2|16,2:254.253:326.675,113.385:0.398507,0.398507:6.15149e-07,0.210266,0.789782
-chr1	7520010	.	TGTGTGTGTGTGTG	TGTGTGTGTGTG	.	.	END=7520023;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:38:1.0:6,7:6-6,7-7:19,18,0,0:6,8|7,11:NULL:255.836:366.612,131.36:0.0,0.0:3.15511e-09,1.0,1.36487e-11	0/0:36:1.0:7,7:7-7,7-7:28,8,0,0:7,28:NULL:187.502:326.675,113.385:0.0,0.0:4.34125e-35,6.38469e-08,1.0
-chr1	7520572	.	AAACAAAACAAAACA	.	.	.	END=7520586;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999963:3,3:3-3,3-3:18,10,0,0:3,18:NULL:166.883:366.612,131.36:0.0,0.0:0.0,3.36053e-05,0.99997	0/0:31:1.0:3,3:3-3,3-3:25,6,0,0:3,25:NULL:150.359:326.675,113.385:0.0,0.0:0.0,1.45848e-07,1.0
-chr1	7522440	.	ATACATACATAC	.	.	.	END=7522451;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.980761:3,3:3-3,3-3:9,10,0,0:3,9:NULL:122.028:366.612,131.36:0.0,0.0:1.1521e-29,0.0106761,0.989349	0/0:20:0.999312:3,3:3-3,3-3:14,6,0,0:3,14:NULL:110.981:326.675,113.385:0.0,0.0:0.0,0.000350902,0.999651
-chr1	7522568	.	TATATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=7522619;RU=ta;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:5:0.0384164:25,25:23-26,23-26:0,4,0,0:NULL:NULL:41.887:366.612,131.36:1.03142,1.03142:0.310425,0.502293,0.187294	1/1:1:0.020438:23,23:26-26,26-26:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
-chr1	7522982	.	TTCTTTCTTTCTTTCT	.	.	.	END=7522997;RU=ttct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997267:4,4:4-4,4-4:11,10,0,3:4,11:3,3:159.691:366.612,131.36:0.0,0.0:2.07316e-37,0.00102804,0.998975	0/0:29:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:147.627:326.675,113.385:0.0,0.0:0.0,1.34801e-06,1.0
-chr1	7524309	.	TAAAATAAAATAAAATAAAATAAAA	.	.	.	END=7524333;RU=taaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999598:5,5:5-5,5-5:16,20,0,0:5,16:NULL:250.858:366.612,131.36:0.0,0.0:1e-45,0.000380237,0.999621	0/0:23:0.959119:5,5:5-5,5-5:7,11,0,5:5,7:4,5:166.74:326.675,113.385:0.0,0.0:2.65051e-20,0.0202231,0.979819
-chr1	7524638	.	AACAAACAAACAAACAAACA	.	.	.	END=7524657;RU=aaca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.99787:5,5:5-5,5-5:12,5,0,3:5,12:4,3:119.09:366.612,131.36:0.0,0.0:6.85631e-34,0.000774939,0.999227	0/0:40:1.0:5,5:3-5,3-5:24,9,0,6:5,24:3,2|4,4:220.454:326.675,113.385:0.43384,0.43384:0.0,1.91326e-07,1.0
-chr1	7527088	.	TTTTATTTTATTTTA	.	.	.	END=7527102;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999917:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.538:366.612,131.36:0.0,0.0:0.0,5.55056e-05,0.999948	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:198.701:326.675,113.385:0.0,0.0:0.0,6.87673e-06,0.999994
-chr1	7527397	.	AATAAATAAATA	.	.	.	END=7527408;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999312:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.911:366.612,131.36:0.0,0.0:0.0,0.000414194,0.99959	0/0:24:1.0:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.585:326.675,113.385:0.0,0.0:0.0,5.10849e-06,0.999995
-chr1	7532994	.	TCTCTCTCTCTCTCTC	.	.	.	END=7533009;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.998564:8,8:6-8,6-8:25,14,0,4:7,3|8,22:4,2|6,1|7,1:268.724:366.612,131.36:0.479355,0.479355:7.15827e-37,0.00144231,0.998564	0/0:65:1.0:8,8:8-8,8-8:32,24,0,8:8,32:5,3|6,2|7,3:406.392:326.675,113.385:0.0,0.0:0.0,1.17275e-09,1.0
-chr1	7538575	.	TTAATTAATTAATTAA	.	.	.	END=7538590;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999827:4,4:4-4,4-4:17,16,0,0:4,17:NULL:213.35:366.612,131.36:0.0,0.0:0.0,0.000140341,0.999864	0/0:25:0.999905:4,4:4-4,4-4:17,8,0,0:4,17:NULL:137.243:326.675,113.385:0.0,0.0:0.0,6.42069e-05,0.99994
-chr1	7542839	.	TCTCCTCTCCTCTCC	.	.	.	END=7542853;RU=tctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:225.92:366.612,131.36:0.0,0.0:0.0,2.00965e-06,1.0	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:172.591:326.675,113.385:0.0,0.0:0.0,8.90944e-08,1.0
-chr1	7544211	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=7544230;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998288:4,4:4-4,4-4:12,10,0,4:4,12:3,4:168.562:366.612,131.36:0.0,0.0:3.492e-37,0.000736078,0.999265	0/0:32:1.0:4,4:4-4,4-4:19,11,0,2:4,19:3,2:191.689:326.675,113.385:0.0,0.0:0.0,7.93364e-06,0.999994
-chr1	7544358	.	ATATATATATATATAT	.	.	.	END=7544373;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.778181:8,8:8-10,8-10:16,3,0,0:8,14|10,2:NULL:101.556:366.612,131.36:0.932167,0.932167:2.9458e-20,0.000123362,0.999879	0/0:23:0.997822:8,8:8-8,8-8:13,10,0,0:8,13:NULL:149.317:326.675,113.385:0.0,0.0:2.6257e-17,0.00140249,0.998603
-chr1	7546856	.	TTTGTTTGTTTG	.	.	.	END=7546867;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,18,0,2:3,29:2,2:296.504:366.612,131.36:0.0,0.0:0.0,6.73998e-09,1.0	0/0:45:1.0:3,3:3-3,3-3:32,13,0,0:3,32:NULL:240.066:326.675,113.385:0.0,0.0:0.0,1.40992e-09,1.0
-chr1	7549821	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7549896;RU=ag;PERIOD=2;REF=38.0;EXPTHRESH=38	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:25:0.0346401:43,43:32-43,32-43:0,10,0,15:NULL:5,2|6,1|8,1|9,1|13,1|18,1|25,1|26,1|27,1|29,1|30,1|32,1|39,1|40,1:210.818:366.612,131.36:3.20615,3.20615:2.41683e-15,0.418057,0.582021	1/1:29:0.240765:37,37:35-37,35-37:2,14,0,13:37,2:5,1|8,1|9,1|14,2|15,2|16,1|19,1|24,1|27,1|30,1|34,1:243.499:326.675,113.385:0.43384,0.43384:0.619148,0.35909,0.0218496
-chr1	7550748	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=7550765;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,14,0,2:3,23:2,2:239.754:366.612,131.36:0.0,0.0:0.0,6.73102e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.669:326.675,113.385:0.0,0.0:0.0,2.4095e-07,1.0
-chr1	7554806	.	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=7554849;RU=tatt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999608:9,9:9-9,9-9:15,12,0,5:9,15:3,1|5,2|7,2:210.091:366.612,131.36:0.0,0.0:0.999896,0.000104551,7.20019e-34	0/0:31:0.995921:11,11:11-11,11-11:11,10,0,10:11,11:5,1|6,2|7,2|9,1|10,4:208.914:326.675,113.385:0.0,0.0:1.39714e-23,0.00136196,0.998641
-chr1	7559127	.	GTTAATGGTTAATGGTTAATGGTTAATG	.	.	.	END=7559154;RU=gttaatg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:20,11,0,5:4,20:3,5:213.852:366.612,131.36:0.0,0.0:0.0,3.7562e-06,1.0	0/0:38:0.999927:4,4:4-4,4-4:16,14,0,8:4,16:3,8:247.545:326.675,113.385:0.0,0.0:0.0,5.09107e-05,0.999949
-chr1	7560900	.	TTTATTTATTTATTTATTTA	.	.	.	END=7560919;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:5,5:5-5,5-5:26,9,0,3:5,26:4,3:204.862:366.612,131.36:0.0,0.0:0.0,4.48993e-08,1.0	0/0:41:1.0:5,5:5-5,5-5:30,8,0,2:5,30:3,1|4,1:207.471:326.675,113.385:0.0,0.0:0.0,5.3766e-09,1.0
-chr1	7570199	.	TTGTTGTTGTTG	.	.	.	END=7570210;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999875:4,4:4-4,4-4:16,11,0,3:4,16:3,3:187.712:366.612,131.36:0.0,0.0:0.0,5.7529e-05,0.999942	0/0:33:1.00001:4,4:4-4,4-4:21,12,0,0:4,21:NULL:193.419:326.675,113.385:0.0,0.0:0.0,3.83183e-06,1.0
-chr1	7579482	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7579505;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.99029:8,8:2-8,2-8:10,21,0,10:8,10:2,3|3,1|5,1|7,5:307.104:366.612,131.36:2.89082,2.89082:0.0,0.000535287,0.999469	0/0:40:0.995425:6,6:5-6,5-6:22,11,0,7:5,2|6,20:2,1|3,1|4,1|5,4:251.596:326.675,113.385:0.398507,0.398507:0.0,0.00459544,0.995416
-chr1	7584141	.	AACAACAACAAC	.	.	.	END=7584152;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:24,12,0,0:4,24:NULL:208.236:366.612,131.36:0.0,0.0:0.0,8.88332e-07,1.0	0/0:29:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:152.193:326.675,113.385:0.0,0.0:0.0,3.31203e-06,1.0
-chr1	7586036	.	TGGGTGGGTGGG	.	.	.	END=7586047;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:25,21,0,0:3,25:NULL:286.938:366.612,131.36:0.0,0.0:0.0,2.03703e-07,1.0	0/0:31:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:197.905:326.675,113.385:0.0,0.0:0.0,4.50361e-05,0.999956
-chr1	7590013	.	ATGTATGTATGTATGTATGTATGTATGT	ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	END=7590040;RU=atgt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:1.0:11,11:11-11,11-11:20,20,0,22:11,20:4,1|5,2|6,2|7,4|8,5|9,1|10,7:432.91:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:53:1.0:7,7:7-7,7-7:27,15,0,11:7,27:2,1|3,2|4,2|5,3|6,3:334.025:326.675,113.385:0.0,0.0:6.34877e-36,7.12813e-08,1.0
-chr1	7591071	.	GAGGAGGAGGAGGAGGAG	.	.	.	END=7591088;RU=gag;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999987:6,6:6-6,6-6:20,28,0,0:6,20:NULL:346.721:366.612,131.36:0.0,0.0:0.0,2.01279e-05,0.99998	0/0:48:1.00001:6,6:6-6,6-6:22,24,0,2:6,22:4,1|5,1:315.295:326.675,113.385:0.0,0.0:0.0,1.8212e-06,1.0
-chr1	7592319	.	CAAACAAACAAA	.	.	.	END=7592330;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.998935:3,3:3-3,3-3:13,13,0,3:3,13:2,3:195.04:366.612,131.36:0.0,0.0:8.418e-42,0.000410217,0.999591	0/0:14:0.997808:3,3:3-3,3-3:12,2,0,0:3,12:NULL:65.2842:326.675,113.385:0.0,0.0:6.32806e-39,0.000946074,0.999058
-chr1	7593902	.	AAACAAACAAACAAAC	.	.	.	END=7593917;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:4,4:4-4,4-4:31,28,0,3:4,31:3,3:401.189:366.612,131.36:0.0,0.0:0.0,1.30138e-09,1.0	0/0:44:1.00001:4,4:4-4,4-4:22,18,0,4:4,22:2,1|3,3:291.754:326.675,113.385:0.0,0.0:0.0,2.25469e-06,1.0
-chr1	7604547	.	TTAATTAATTAA	.	.	.	END=7604558;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.99893:3,3:3-3,3-3:13,27,0,0:3,13:NULL:298.801:366.612,131.36:0.0,0.0:2.38039e-40,0.000887786,0.999118	0/0:33:0.999946:3,3:3-3,3-3:17,16,0,0:3,17:NULL:206.927:326.675,113.385:0.0,0.0:0.0,4.86683e-05,0.999955
-chr1	7606004	.	CTGCTGCTGCTG	CTG	.	.	END=7606015;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.000327754:1,1:1-1,1-1:0,1,0,0:NULL:NULL:8.70265:366.612,131.36:0.0,0.0:0.0027931,0.119525,0.877789	0/0:50:1.0:4,4:4-4,4-4:33,17,0,0:4,33:NULL:284.495:326.675,113.385:0.0,0.0:0.0,1.60651e-09,1.0
-chr1	7614755	.	TCCTCCTCCTCC	.	.	.	END=7614766;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:4,4:4-4,4-4:32,19,0,2:4,32:3,2:316.87:366.612,131.36:0.0,0.0:0.0,9.31883e-10,1.0	0/0:55:1.0:4,4:4-4,4-4:39,13,0,3:4,39:3,3:289.997:326.675,113.385:0.0,0.0:0.0,7.01508e-12,1.0
-chr1	7618269	.	AATAAATAAATA	.	.	.	END=7618280;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:244.391:366.612,131.36:0.0,0.0:0.0,9.92004e-08,1.0	0/0:27:1.0:3,3:3-3,3-3:25,2,0,0:3,25:NULL:115.743:326.675,113.385:0.0,0.0:0.0,1.26847e-07,1.0
-chr1	7621644	.	CTTTCTTTCTTT	.	.	.	END=7621655;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995956:3,3:3-3,3-3:11,19,0,0:3,11:NULL:225.21:366.612,131.36:0.0,0.0:8.52516e-38,0.00211426,0.99789	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.959:326.675,113.385:0.0,0.0:0.0,1.43963e-07,1.0
-chr1	7624737	.	CAACAACAACAACAACAACAACAACAACAA	CAACAACAACAACAACAACAACAACAACAACAACAA	.	.	END=7624766;RU=caa;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.998272:12,12:9-12,9-12:14,18,0,7:12,14:4,1|5,1|6,1|7,1|10,3:281.034:366.612,131.36:1.03993,1.03993:0.0,0.000371058,0.99963	0/0:40:1.0:10,10:10-10,10-10:24,9,0,6:10,24:6,2|7,2|9,2:226.838:326.675,113.385:0.0,0.0:0.0,2.91704e-07,1.0
-chr1	7626618	.	TTATTTATTTATTTAT	.	.	.	END=7626633;RU=ttat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:4,4:4-4,4-4:32,25,0,4:4,32:2,1|3,3:372.388:366.612,131.36:0.0,0.0:0.0,1.15553e-09,1.0	0/0:24:1.0:4,4:4-4,4-4:19,3,0,2:4,19:2,1|3,1:115.882:326.675,113.385:0.0,0.0:0.0,6.68964e-06,0.999994
-chr1	7630404	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7630451;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.380134:23,23:21-24,21-24:6,9,0,11:22,2|23,4:6,2|7,1|8,1|11,2|14,1|16,1|17,1|22,2:205.339:366.612,131.36:0.851485,0.851485:0.92278,0.0772677,4.64652e-05	0/2:58:0.983016:24,25:23-24,23-25:21,13,0,23:23,8|24,11|25,2:4,1|6,1|8,1|10,2|11,1|12,1|14,1|15,1|16,1|17,3|18,2|20,1|21,2|22,2|23,1|24,1|25,1:429.446:326.675,113.385:0.475866,0.848371:1.52509e-19,0.0136464,0.986385
-chr1	7632861	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7632920;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:35:0.999725:14,15:14-14,14-15:6,17,0,12:14,4|15,2:3,1|4,1|5,2|6,1|8,1|9,3|11,1|12,1|13,1:269.527:366.612,131.36:0.14072,0.311527:0.000176912,0.999826,7.76206e-08	0/0:62:0.930921:15,15:14-15,14-15:8,31,0,22:15,8:3,1|4,4|5,2|6,1|7,1|8,1|9,4|10,3|11,4|13,1:479.498:326.675,113.385:0.499387,0.499387:6.14073e-22,0.0616203,0.938469
-chr1	7633359	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7633396;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.420345:22,27:20-22,20-27:7,15,0,13:20,3|22,4:7,1|8,1|9,1|11,2|13,1|16,1|17,2|18,2|20,1|27,1:289.539:366.612,131.36:0.651061,3.31844:1.51187e-26,4.74397e-08,1.0	0/0:21:0.79191:19,19:19-19,19-19:6,7,0,8:19,6:8,1|10,1|12,2|13,1|15,1|17,1|18,1:157.17:326.675,113.385:0.0,0.0:1.67294e-08,0.0692101,0.930883
-chr1	7633397	.	ATTAATTAATTA	ATTAATTAATTAATTA	.	.	END=7633408;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.605946:4,4:1-4,1-4:5,12,0,0:4,5:NULL:133.234:366.612,131.36:0.585081,0.585081:1.87865e-14,0.192351,0.807701	0/0:17:0.99704:3,3:3-3,3-3:12,5,0,0:3,12:NULL:96.7465:326.675,113.385:0.0,0.0:1.72428e-21,0.00151512,0.998489
-chr1	7637624	.	CACACACACACACA	CACACACACACACACA,CACACACACACACACACA	.	.	END=7637637;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.999391:8,9:8-10,9-10:12,25,0,0:8,3|9,7|10,2:NULL:285.742:366.612,131.36:0.683384,0.21692:3.87704e-34,1.49308e-06,1.0	0/0:38:0.999836:7,7:7-9,7-9:27,10,0,0:7,24|8,3:NULL:204.461:326.675,113.385:0.405095,0.405095:1.08056e-35,1.06684e-07,1.0
-chr1	7637849	.	TAATAATAATAA	.	.	.	END=7637860;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:21,28,0,0:4,21:NULL:332.138:366.612,131.36:0.0,0.0:0.0,4.61686e-06,0.999995	0/0:37:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:226.901:326.675,113.385:0.0,0.0:0.0,1.6664e-06,1.0
-chr1	7642243	.	AACAACAACAACAACAACAACAACAAC	AACAACAACAACAACAACAACAACAACAAC	.	.	END=7642269;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.99301:10,10:9-10,9-10:18,14,0,4:9,2|10,16:5,2|7,1|9,1:244.852:366.612,131.36:0.323567,0.323567:0.0,1.39032e-05,0.999987	0/0:32:0.994938:9,9:9-10,9-10:11,13,0,7:9,11:4,2|6,1|7,1|8,3:214.352:326.675,113.385:0.46122,0.46122:3.66479e-24,0.00171286,0.998292
-chr1	7644073	.	GGGTGGGTGGGT	.	.	.	END=7644084;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.990731:3,3:3-3,3-3:11,24,0,2:3,11:2,2:274.989:366.612,131.36:0.0,0.0:3.1445e-32,0.00562824,0.994385	0/0:48:0.996096:3,3:3-3,3-3:12,36,0,0:3,12:NULL:366.483:326.675,113.385:0.0,0.0:1.17169e-35,0.00335808,0.996649
-chr1	7651115	.	TTTCTTTCTTTC	.	.	.	END=7651126;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999978:3,3:3-3,3-3:18,16,0,0:3,18:NULL:223.168:366.612,131.36:0.0,0.0:0.0,2.81898e-05,0.999972	0/0:26:0.99948:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.136:326.675,113.385:0.0,0.0:0.0,0.000349136,0.999652
-chr1	7652360	.	GAGAGAGAGAGAGAGAGA	GAGAGAGA,GAGAGAGAGAGAGA	.	.	END=7652377;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:49:0.999988:7,9:7-9,9-9:27,17,0,4:7,10|9,17:5,1|8,3:316.932:366.612,131.36:0.472766,0.0:5.84026e-33,0.999986,1.46053e-05	1/0:45:0.929022:4,9:4-9,9-9:29,15,0,0:4,5|7,5|9,19:NULL:288.077:326.675,113.385:1.79969,0.0:1.63191e-37,0.99934,0.000661574
-chr1	7658674	.	TTTATTTATTTA	.	.	.	END=7658685;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:221.295:366.612,131.36:0.0,0.0:0.0,1.78929e-06,1.0	0/0:48:1.0:3,3:3-3,3-3:30,12,0,6:3,30:2,6:271.917:326.675,113.385:0.0,0.0:0.0,2.61691e-09,1.0
-chr1	7660964	.	TGCCTGCCTGCCTGCC	.	.	.	END=7660979;RU=tgcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999939:4,4:4-4,4-4:17,12,0,4:4,17:3,4:203.556:366.612,131.36:0.0,0.0:0.0,2.74925e-05,0.999972	0/0:27:0.999887:4,4:3-4,3-4:16,7,0,3:4,16:2,1|3,2:152.085:326.675,113.385:0.419363,0.419363:0.0,5.94852e-05,0.999941
-chr1	7660996	.	TCTTTCTTTCTTTCTT	.	.	.	END=7661011;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992254:4,4:4-4,4-4:11,11,0,0:4,11:NULL:141.609:366.612,131.36:0.0,0.0:4.56328e-37,0.0052796,0.994732	0/0:22:0.999809:4,4:4-4,4-4:16,6,0,0:4,16:NULL:120.568:326.675,113.385:0.0,0.0:0.0,0.000139604,0.999864
-chr1	7661246	.	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTG	.	.	END=7661265;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.829463:9,9:8-12,8-12:15,17,0,2:8,2|9,13:6,1|7,1:244.023:366.612,131.36:1.45844,1.45844:0.999522,0.000480569,7.49084e-22	0/0:37:0.970158:10,10:10-11,10-11:20,12,0,5:10,17|11,3:5,1|6,1|7,1|8,2:243.239:326.675,113.385:0.374147,0.374147:2.30016e-25,9.69941e-06,0.999993
-chr1	7661271	.	TTGTTGTTGTTG	TTGTTGTTGTTGTTG	.	.	END=7661282;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:38:0.999729:4,5:4-5,5-5:18,20,0,0:4,3|5,15:NULL:266.92:366.612,131.36:0.425627,0.0:0.0,6.53169e-07,1.0	0/0:37:1.0:4,4:4-4,4-4:26,11,0,0:4,26:NULL:207.408:326.675,113.385:0.0,0.0:0.0,1.57076e-07,1.0
-chr1	7667977	.	GGGGTGGGGTGGGGT	.	.	.	END=7667991;RU=ggggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:3,3:3-3,3-3:34,25,0,3:3,34:2,3:373.822:366.612,131.36:0.0,0.0:0.0,3.26358e-10,1.0	0/0:66:1.0:3,3:3-3,3-3:38,25,0,3:3,38:2,3:409.533:326.675,113.385:0.0,0.0:0.0,2.39564e-11,1.0
-chr1	7668272	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7668301;RU=ga;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.238356:24,29:23-26,26-30:4,11,0,7:23,2|24,2:8,1|15,1|17,1|19,1|28,3:182.126:366.612,131.36:0.77595,0.915079:0.0,0.0,1.0	0/0:63:0.999955:15,15:15-15,15-15:33,18,0,12:14,5|15,28:5,1|7,1|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,1:408.274:326.675,113.385:0.0990099,0.0990099:3.48e-39,4.78434e-05,0.999955
-chr1	7668463	.	GGAGAGGAGAGGAGA	.	.	.	END=7668477;RU=ggaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999726:3,3:3-3,3-3:15,6,0,0:3,15:NULL:111.479:366.612,131.36:0.0,0.0:2.9388e-41,0.000137001,0.999865	0/0:22:0.884408:3,3:3-3,3-3:6,16,0,0:3,6:NULL:168.509:326.675,113.385:0.0,0.0:8.96207e-17,0.0784737,0.921624
-chr1	7678104	.	TGTTTTGTTTTGTTT	.	.	.	END=7678118;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.990119:3,3:3-3,3-3:10,6,0,0:3,10:NULL:96.8139:366.612,131.36:0.0,0.0:1.51957e-31,0.00544876,0.994565	0/0:25:0.999438:3,3:3-3,3-3:14,11,0,0:3,14:NULL:162.108:326.675,113.385:0.0,0.0:2.4e-44,0.00034485,0.999659
-chr1	7684673	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7684693;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.992494:7,7:7-7,7-7:11,8,0,2:7,11:3,1|6,1:134.095:366.612,131.36:0.0,0.0:1.22226e-33,0.00318471,0.996822	0/0:29:0.998834:7,7:7-7,7-7:13,12,0,4:7,13:4,1|5,2|6,1:193.784:326.675,113.385:0.0,0.0:1.27248e-39,0.000558105,0.999446
-chr1	7686794	.	TTATTTATTTAT	.	.	.	END=7686805;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999415:3,3:3-3,3-3:14,11,0,0:3,14:NULL:159.567:366.612,131.36:0.0,0.0:0.0,0.000336862,0.999666	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:156.467:326.675,113.385:0.0,0.0:0.0,2.85844e-07,1.0
-chr1	7688060	.	TATATTATATTATAT	.	.	.	END=7688074;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997224:3,3:3-3,3-3:12,12,0,0:3,12:NULL:159.819:366.612,131.36:0.0,0.0:3.5616e-40,0.00164966,0.998353	0/0:21:0.99878:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.606:326.675,113.385:0.0,0.0:1.23e-43,0.000718745,0.999286
-chr1	7691107	.	CATCATCATCAT	.	.	.	END=7691118;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:4,4:4-4,4-4:43,16,0,2:4,43:3,2:325.445:366.612,131.36:0.0,0.0:0.0,4.72132e-13,1.0	0/0:56:1.0:4,4:4-4,4-4:35,17,0,4:4,35:3,4:322.898:326.675,113.385:0.0,0.0:0.0,7.26367e-11,1.0
-chr1	7694774	.	GTTGTTGTTGTTGTTGTT	.	.	.	END=7694791;RU=gtt;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999814:6,6:5-6,5-6:16,16,0,0:6,16:NULL:210.71:366.612,131.36:0.35561,0.35561:1.7937e-41,0.000124117,0.999879	0/0:22:0.9979:6,6:6-6,6-6:12,8,0,2:6,12:4,1|5,1:136.005:326.675,113.385:0.0,0.0:5.14711e-31,0.00100407,0.998998
-chr1	7694925	.	AAAAACAAAAAACAAAAAACA	.	.	.	END=7694945;RU=aaaaaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994642:3,3:3-3,3-3:11,14,0,0:3,11:NULL:172.931:366.612,131.36:0.0,0.0:6.27708e-36,0.0041541,0.995855	0/0:24:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:116.335:326.675,113.385:0.0,0.0:0.0,3.64749e-06,1.0
-chr1	7695814	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7695835;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999993:11,11:6-11,6-11:29,16,0,7:10,3|11,26:6,2|8,2|9,2|11,1:338.434:366.612,131.36:1.08686,1.08686:6e-44,9.69241e-06,0.999993	0/1:28:0.293335:11,15:11-11,11-15:16,6,0,5:11,16:7,1|10,3|15,1:170.999:326.675,113.385:0.0,1.9624:1.21793e-27,7.70312e-08,1.0
-chr1	7695943	.	ATTTATTTATTTATTT	ATTT	.	.	END=7695958;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.100699:1,1:1-3,1-3:0,24,0,0:NULL:NULL:233.385:366.612,131.36:0.681228,0.681228:0.674214,0.300808,0.0250224	0/0:28:0.999907:4,4:4-4,4-4:17,11,0,0:4,17:NULL:160.39:326.675,113.385:0.0,0.0:1.4e-44,5.94761e-05,0.999941
-chr1	7696936	.	AAGGAAGGAAGG	.	.	.	END=7696947;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.9998:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.238:366.612,131.36:0.0,0.0:0.0,9.38424e-05,0.999909	0/0:49:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:311.19:326.675,113.385:0.0,0.0:0.0,4.7513e-08,1.0
-chr1	7708555	.	TATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATA	.	.	END=7708594;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.727258:13,13:5-13,5-13:7,6,0,0:13,7:NULL:87.3032:366.612,131.36:3.78047,3.78047:1.0,0.0,0.0	0/0:4:0.210509:20,20:19-20,19-20:2,2,0,0:20,2:NULL:27.8346:326.675,113.385:0.284901,0.284901:0.0129125,0.424261,0.562949
-chr1	7714389	.	TTTATTTATTTA	.	.	.	END=7714400;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999999:3,3:3-3,3-3:18,15,0,2:3,18:2,2:224.081:366.612,131.36:0.0,0.0:0.0,1.10948e-05,0.999993	0/0:21:0.998997:3,3:3-3,3-3:13,6,0,2:3,13:2,2:118.63:326.675,113.385:0.0,0.0:5.2e-44,0.000355482,0.999645
-chr1	7716510	.	TTCTTCTTCTTC	.	.	.	END=7716521;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:31,21,0,0:4,31:NULL:313.248:366.612,131.36:0.0,0.0:0.0,3.48626e-09,1.0	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:219.121:326.675,113.385:0.0,0.0:0.0,4.9399e-07,1.0
-chr1	7722901	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7722920;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.809748:4,4:4-4,4-4:4,18,0,3:4,4:3,3:206.834:366.612,131.36:0.0,0.0:5.48788e-15,0.0990296,0.90107	0/0:15:0.993087:4,4:4-4,4-4:11,4,0,0:4,11:NULL:82.8366:326.675,113.385:0.0,0.0:1.07704e-37,0.00430158,0.995711
-chr1	7726872	.	GCATGCATGCAT	.	.	.	END=7726883;RU=gcat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:242.362:366.612,131.36:0.0,0.0:0.0,6.85042e-08,1.0	0/0:38:1.0:3,3:3-3,3-3:25,8,0,5:3,25:2,5:204.689:326.675,113.385:0.0,0.0:0.0,6.51567e-08,1.0
-chr1	7730158	.	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC,TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC,TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	.	.	END=7730267;RU=ttccc;PERIOD=5;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.235495:18,20:18-18,19-23:6,5,0,13:18,6:4,1|5,1|6,2|7,1|8,2|13,1|14,1|17,1|19,1|20,2:177.152:366.612,131.36:0.557277,1.07269:0.399266,0.600796,5.83373e-27	3/3:37:0.0548084:21,21:8-23,8-23:0,12,0,22:NULL:3,1|4,2|5,1|8,1|9,1|10,1|11,2|13,1|14,2|16,3|18,1|19,2|20,4:268.821:326.675,113.385:5.02335,5.02335:0.261242,0.509873,0.228898
-chr1	7730913	.	TTATTTATTTAT	.	.	.	END=7730924;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,14,0,0:3,20:NULL:204.163:366.612,131.36:0.0,0.0:0.0,2.67187e-06,1.0	0/0:31:0.999976:3,3:3-3,3-3:17,12,0,2:3,17:2,2:191.298:326.675,113.385:0.0,0.0:0.0,1.77926e-05,0.999986
-chr1	7730966	.	TTAATTAATTAA	.	.	.	END=7730977;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:151.309:366.612,131.36:0.0,0.0:0.0,6.24065e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:181.216:326.675,113.385:0.0,0.0:0.0,4.03032e-06,0.999995
-chr1	7731592	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7731635;RU=tc;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:49:0.326748:25,28:25-25,24-30:10,25,0,14:24,3|25,7:4,1|5,1|9,1|13,1|15,1|16,1|17,1|18,1|19,1|21,1|22,2|27,1|28,1:400.056:366.612,131.36:0.0990099,1.45096:0.0,3.79329e-14,1.0	0/1:40:0.564427:22,24:21-22,21-24:10,17,0,12:21,4|22,6:9,1|11,3|13,1|18,1|19,1|21,3|22,1|24,1:316.193:326.675,113.385:0.298675,1.12871:1.40782e-18,0.000296911,0.999705
-chr1	7731916	.	TGTATGTATGTA	.	.	.	END=7731927;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:19,18,0,4:3,19:2,4:275.074:366.612,131.36:0.0,0.0:0.0,7.01978e-06,0.999994	0/0:22:0.999697:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.413:326.675,113.385:0.0,0.0:0.0,0.00016162,0.999841
-chr1	7731957	.	TGTATGTATGTA	.	.	.	END=7731968;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:245.533:366.612,131.36:0.0,0.0:0.0,3.28198e-07,1.0	0/0:26:0.999966:3,3:3-3,3-3:18,6,0,2:3,18:2,2:143.569:326.675,113.385:0.0,0.0:0.0,1.6661e-05,0.999986
-chr1	7732202	.	GGTTGGGTTGGGTTG	.	.	.	END=7732216;RU=ggttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:287.468:366.612,131.36:0.0,0.0:0.0,2.66084e-07,1.0	0/0:26:0.999927:3,3:3-3,3-3:17,9,0,0:3,17:NULL:154.298:326.675,113.385:0.0,0.0:0.0,5.22394e-05,0.999949
-chr1	7736177	.	CACACACACACACA	.	.	.	END=7736190;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999598:7,7:4-7,4-7:15,16,0,4:7,15:5,1|6,3:242.359:366.612,131.36:1.29472,1.29472:1.71162e-36,0.000150262,0.99985	0/0:31:0.977661:7,7:6-7,6-7:21,6,0,4:6,2|7,19:5,1|6,3:179.53:326.675,113.385:0.412766,0.412766:7.098e-42,0.0223881,0.977653
-chr1	7741556	.	CTCTCTCTCTCT	.	.	.	END=7741567;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999959:6,6:6-6,6-6:18,3,0,0:6,18:NULL:99.8163:366.612,131.36:0.0,0.0:0.0,2.33026e-05,0.999979	0/0:39:1.0:6,6:6-6,6-6:23,16,0,0:6,23:NULL:239.065:326.675,113.385:0.0,0.0:0.0,9.61291e-07,1.0
-chr1	7742062	.	GTGGTGGTGGTGGTGGTGGTGGTGGTG	GTGGTGGTGGTGGTG	.	.	END=7742088;RU=gtg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:65:0.80763:5,9:5-9,9-9:21,39,0,5:5,2|9,19:5,2|7,1|8,1|9,1:493.627:366.612,131.36:1.99912,0.0:0.0,0.80792,0.192135	0/0:62:0.919382:9,9:5-9,5-9:26,32,0,4:5,2|8,2|9,22:6,1|8,3:453.025:326.675,113.385:1.77932,1.77932:0.0,0.0807176,0.919377
-chr1	7750668	.	AGGAGGAGGAGGAGGAGG	.	.	.	END=7750685;RU=agg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999891:6,6:6-6,6-6:16,19,0,3:6,16:4,2|5,1:262.318:366.612,131.36:0.0,0.0:1e-44,6.22465e-05,0.99994	0/0:53:1.0:6,6:6-6,6-6:31,16,0,5:6,31:3,2|5,3:309.142:326.675,113.385:0.0,0.0:0.0,1.43422e-09,1.0
-chr1	7751603	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=7751648;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.924204:20,20:19-20,19-20:11,13,0,15:19,2|20,9:5,2|7,1|8,1|10,1|11,1|12,2|15,2|18,3|19,2:286.55:366.612,131.36:0.284901,0.284901:0.999339,0.000667048,6.53359e-23	0/0:53:0.902676:23,23:23-24,23-24:8,19,0,25:23,8:5,1|7,2|8,2|9,1|10,2|11,2|12,2|13,1|14,1|16,1|17,1|18,2|19,1|20,2|21,3|22,1:408.968:326.675,113.385:0.398507,0.398507:7.15271e-09,0.0285055,0.971546
-chr1	7753197	.	CATACATACATACATACATACATACATACATACATA	CATACATACATACATACATACATACATACATACATACATA	.	.	END=7753232;RU=cata;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999229:10,10:10-10,10-10:13,21,0,15:10,13:4,3|5,3|7,2|8,4|9,3:359.982:366.612,131.36:0.0,0.0:0.0,3.85728e-05,0.999963	0/0:48:1.0:9,9:9-9,9-9:19,13,0,15:9,19:3,1|4,3|5,5|6,2|7,1|8,3:306.119:326.675,113.385:0.0,0.0:3.61896e-38,5.86017e-06,0.999995
-chr1	7754174	.	TTGTCCCTTGTCCCTTGTCCC	.	.	.	END=7754194;RU=ttgtccc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.998875:3,3:3-3,3-3:13,10,0,0:3,13:NULL:141.821:366.612,131.36:0.0,0.0:7.13e-43,0.000787695,0.999217	0/0:30:1.00001:3,3:3-3,3-3:21,7,0,2:3,21:2,2:165.233:326.675,113.385:0.0,0.0:0.0,1.73527e-06,1.0
-chr1	7756374	.	GTGGGTGGGTGG	.	.	.	END=7756385;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,10,0,3:3,28:2,3:226.375:366.612,131.36:0.0,0.0:0.0,6.78654e-09,1.0	0/0:58:1.00001:3,3:3-3,3-3:21,35,0,2:3,21:2,2:419.101:326.675,113.385:0.0,0.0:0.0,2.44914e-06,1.0
-chr1	7757086	.	TAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTA	TAGTATAGTATAGTATAGTATAGTATAGTA	.	.	END=7757130;RU=tagta;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.0:6,6:6-6,6-6:29,11,0,5:6,29:2,2|4,1|5,2:253.025:366.612,131.36:0.0,0.0:1.0,3.5764e-09,0.0	0/0:38:0.999994:9,9:6-9,6-9:19,12,0,6:9,19:2,2|3,1|6,1|7,1|8,1:237.37:326.675,113.385:0.810189,0.810189:3e-45,1.63925e-05,0.999986
-chr1	7769821	.	TAAATAAATAAA	.	.	.	END=7769832;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:268.979:366.612,131.36:0.0,0.0:0.0,4.49312e-08,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:151.86:326.675,113.385:0.0,0.0:0.0,2.38585e-06,1.0
-chr1	7771289	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=7771316;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.0:6,6:6-6,6-6:20,14,0,3:6,20:2,1|4,2:235.568:366.612,131.36:0.0,0.0:1.0,2.87929e-06,5.2e-44	0/0:21:0.997637:7,7:7-7,7-7:12,7,0,2:7,12:2,1|6,1:126.413:326.675,113.385:0.0,0.0:1.45808e-39,0.0012583,0.998747
-chr1	7771869	.	TCTTTCTTTCTTTCTTTCTT	.	.	.	END=7771888;RU=tctt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999699:5,5:5-5,5-5:14,16,0,4:5,14:2,1|4,3:230.877:366.612,131.36:0.0,0.0:1.21585e-40,0.000162183,0.999841	0/0:23:0.999415:5,5:5-5,5-5:14,6,0,3:5,14:2,1|3,1|4,1:137.823:326.675,113.385:0.0,0.0:4.70182e-40,0.000351915,0.999651
-chr1	7774572	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7774631;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:1.0:10,12:10-10,12-12:12,8,0,2:10,6|12,6:6,1|11,1:147.747:366.612,131.36:0.19802,0.0:1.0,5.84118e-14,1.27227e-40	0/0:28:0.909649:15,15:14-15,14-15:6,12,0,9:15,6:4,2|6,1|8,1|12,1|13,1|14,3:205.97:326.675,113.385:0.469019,0.469019:1.82433e-14,0.0521929,0.947889
-chr1	7774898	.	GAGAAGAGAAGAGAAGAGAAGAGAAGAGAA	GAGAA	.	.	END=7774927;RU=gagaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.0866575:1,1:1-3,1-3:0,30,0,0:NULL:NULL:265.586:366.612,131.36:0.628849,0.628849:0.821411,0.173243,0.00542432	0/0:24:0.404266:6,6:3-6,3-6:3,18,0,3:6,3:3,1|5,2:195.218:326.675,113.385:1.06683,1.06683:4.95948e-08,0.451993,0.54812
-chr1	7778042	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7778123;RU=ga;PERIOD=2;REF=41.0;EXPTHRESH=41	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.0487611:20,20:18-21,18-21:0,17,0,10:NULL:5,1|6,1|8,2|9,2|14,2|19,1|20,1:233.463:366.612,131.36:0.774179,0.774179:1.0,0.0,0.0	1/2:32:0.0276154:20,52:14-52,31-53:0,16,0,16:NULL:4,1|7,1|10,1|12,3|15,1|18,2|20,1|28,2|39,1|45,2|52,1:284.165:326.675,113.385:12.7726,4.55678:9.26909e-22,0.769413,0.230618
-chr1	7779108	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=7779135;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.998802:10,10:10-10,10-10:14,12,0,8:10,14:4,1|5,2|6,2|8,3:230.951:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:22:0.993219:14,14:14-15,14-15:11,5,0,5:14,11:6,2|8,1|11,1|13,1:133.13:326.675,113.385:0.35561,0.35561:3.71014e-16,0.00236198,0.997647
-chr1	7781851	.	AACAAAACAAAACAA	.	.	.	END=7781865;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:212.897:366.612,131.36:0.0,0.0:0.0,5.38134e-06,0.999995	0/0:38:1.0:3,3:3-3,3-3:25,13,0,0:3,25:NULL:214.334:326.675,113.385:0.0,0.0:0.0,2.10585e-07,1.0
-chr1	7788005	.	ACCCACCCACCC	.	.	.	END=7788016;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999289:3,3:3-3,3-3:14,22,0,0:3,14:NULL:248.527:366.612,131.36:0.0,0.0:2.657e-42,0.00049849,0.999506	0/0:27:0.999849:3,3:3-3,3-3:16,11,0,0:3,16:NULL:167.991:326.675,113.385:0.0,0.0:0.0,0.000115193,0.999887
-chr1	7795035	.	ACCCACCCACCC	.	.	.	END=7795046;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.992668:3,3:3-3,3-3:11,18,0,0:3,11:NULL:205.859:366.612,131.36:0.0,0.0:1.09167e-32,0.00539508,0.994618	0/0:39:0.998387:3,3:3-3,3-3:13,26,0,0:3,13:NULL:287.107:326.675,113.385:0.0,0.0:2.00258e-38,0.00140911,0.998595
-chr1	7798081	.	TATTTTATTTTATTT	TATTT	.	.	END=7798095;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:20:0.496895:1,3:1-3,1-3:2,18,0,0:3,2:NULL:174.067:366.612,131.36:0.999559,0.623055:2.27498e-07,0.624351,0.375705	0/0:27:0.999956:3,3:3-3,3-3:17,10,0,0:3,17:NULL:157.95:326.675,113.385:0.0,0.0:0.0,3.8157e-05,0.999964
-chr1	7799463	.	ATGATGATGATG	.	.	.	END=7799474;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:27,22,0,2:4,27:3,2:322.329:366.612,131.36:0.0,0.0:0.0,4.87752e-08,1.0	0/0:38:1.0:4,4:4-4,4-4:30,8,0,0:4,30:NULL:188.498:326.675,113.385:0.0,0.0:0.0,6.34163e-09,1.0
-chr1	7801805	.	GTGGGTGGGTGG	.	.	.	END=7801816;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:223.028:366.612,131.36:0.0,0.0:0.0,1.55783e-06,1.0	0/0:37:0.999994:3,3:3-3,3-3:19,16,0,2:3,19:2,2:233.35:326.675,113.385:0.0,0.0:0.0,1.24675e-05,0.999987
-chr1	7803754	.	ACCCACCCACCC	.	.	.	END=7803765;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999118:3,3:3-3,3-3:14,17,0,0:3,14:NULL:212.631:366.612,131.36:0.0,0.0:1.415e-42,0.000604116,0.9994	0/0:34:0.96189:3,3:3-3,3-3:8,26,0,0:3,8:NULL:262.362:326.675,113.385:0.0,0.0:5.20764e-25,0.0283073,0.971747
-chr1	7815175	.	TTGTTGTTGTTG	.	.	.	END=7815186;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:190.375:366.612,131.36:0.0,0.0:0.0,1.82115e-07,1.0	0/0:27:0.99998:4,4:4-5,4-5:18,6,0,2:4,18:3,2:140.519:326.675,113.385:0.284901,0.284901:2.1276e-41,1.56478e-05,0.999986
-chr1	7815188	.	TAGTAGTAGTAGTAGTAGTAG	.	.	.	END=7815208;RU=tag;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:7,7:7-7,7-7:21,12,0,5:7,21:5,1|6,4:233.821:366.612,131.36:0.0,0.0:0.0,1.60282e-06,1.0	0/0:25:0.999849:7,7:7-7,7-7:16,6,0,3:7,16:4,1|6,2:141.732:326.675,113.385:0.0,0.0:2.43164e-35,5.96846e-05,0.999941
-chr1	7817458	.	TTAATTAATTAA	.	.	.	END=7817469;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.983662:3,3:3-3,3-3:10,16,0,0:3,10:NULL:185.333:366.612,131.36:0.0,0.0:8.74342e-33,0.0118355,0.988189	0/0:14:0.929308:3,3:3-3,3-3:7,7,0,0:3,7:NULL:89.6001:326.675,113.385:0.0,0.0:1.61186e-23,0.0389226,0.961144
-chr1	7819272	.	ACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7819295;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.31213:18,25:18-18,18-28:8,12,0,13:18,8:5,2|8,1|9,1|12,2|16,2|17,3|24,1|25,1:256.603:366.612,131.36:0.0,2.54892:0.0,0.0,1.0	0/0:29:0.987278:12,12:11-12,11-12:14,11,0,4:11,2|12,12:8,2|9,1|10,1:196.047:326.675,113.385:0.236383,0.236383:1.05692e-17,0.0116967,0.98833
-chr1	7819739	.	ACCTGGGACGAGAAAACCTGGGACGAGAAAACCTGGGACGAGAAA	ACCTGGGACGAGAAAACCTGGGACGAGAAA	.	.	END=7819783;RU=acctgggacgagaaa;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.993555:2,2:2-2,2-2:11,14,0,0:2,11:NULL:183.204:366.612,131.36:0.0,0.0:0.99902,0.000983438,1.21058e-16	0/0:16:0.993527:3,3:3-3,3-3:11,5,0,0:3,11:NULL:95.4833:326.675,113.385:0.0,0.0:5.11705e-14,0.0047793,0.995235
-chr1	7820296	.	AAAAGAAAAGAAAAG	.	.	.	END=7820310;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.973171:3,3:3-3,3-3:9,11,0,0:3,9:NULL:136.448:366.612,131.36:0.19802,0.19802:7.20979e-29,0.0185596,0.981481	0/0:23:0.999993:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.7:326.675,113.385:0.0,0.0:0.0,1.19035e-05,0.999987
-chr1	7821542	.	TTTGTTTGTTTG	.	.	.	END=7821553;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.874:366.612,131.36:0.0,0.0:0.0,4.49495e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:21,12,0,0:3,21:NULL:185.675:326.675,113.385:0.0,0.0:0.0,4.07183e-06,0.999995
-chr1	7823455	.	TTTATTTATTTA	.	.	.	END=7823466;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:156.071:366.612,131.36:0.0,0.0:0.0,1.02177e-05,0.999993	0/0:23:0.999854:3,3:3-3,3-3:16,7,0,0:3,16:NULL:122.28:326.675,113.385:0.0,0.0:0.0,7.10557e-05,0.999932
-chr1	7838440	.	CTGCTGCTGCTG	.	.	.	END=7838451;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:19,9,0,3:4,19:3,3:182.054:366.612,131.36:0.0,0.0:0.0,7.13775e-06,0.999994	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:224.091:326.675,113.385:0.0,0.0:0.0,8.09682e-06,0.999994
-chr1	7840652	.	ACCCACCCACCC	.	.	.	END=7840663;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:5:0.633775:3,3:3-3,3-3:4,1,0,0:3,4:NULL:24.55:366.612,131.36:0.0,0.0:1.78363e-11,0.150741,0.849338	0/0:23:0.990279:3,3:3-3,3-3:10,13,0,0:3,10:NULL:152.789:326.675,113.385:0.0,0.0:1.10363e-26,0.00576428,0.994249
-chr1	7849736	.	GGGTGGGTGGGT	GGGT	.	.	END=7849747;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0580046:1,1:1-3,1-3:0,9,0,0:NULL:NULL:83.0494:366.612,131.36:1.03018,1.03018:0.182364,0.502118,0.315633	0/0:27:0.993975:3,3:3-3,3-3:10,15,0,2:3,10:2,2:188.748:326.675,113.385:0.0,0.0:1.60427e-28,0.00273042,0.997276
-chr1	7851717	.	ATTTTTTTATTTTTTTATTTTTTT	.	.	.	END=7851740;RU=attttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.995889:3,3:3-3,3-3:11,6,0,0:3,11:NULL:101.894:366.612,131.36:0.0,0.0:7.14769e-35,0.00241098,0.997595	0/0:15:0.943631:3,3:3-3,3-3:7,6,0,2:3,7:2,2:99.6613:326.675,113.385:0.0,0.0:2.55924e-22,0.0283061,0.971747
-chr1	7857369	.	TTTAATTTAATTTAATTTAATTTAA	TTTAATTTAATTTAATTTAATTTAATTTAA	.	.	END=7857393;RU=tttaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.981201:6,6:4-6,4-6:10,3,0,0:6,10:NULL:69.5344:366.612,131.36:0.985733,0.985733:4.18017e-39,0.0116041,0.98842	0/0:26:0.999993:5,5:5-5,5-5:19,7,0,0:5,19:NULL:141.068:326.675,113.385:0.0,0.0:0.0,1.77228e-05,0.999986
-chr1	7861967	.	TTTGTTTTGTTTTGT	.	.	.	END=7861981;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:26,24,0,2:3,26:2,2:334.791:366.612,131.36:0.0,0.0:0.0,1.30562e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:26,5,0,4:3,26:2,4:173.888:326.675,113.385:0.0,0.0:0.0,3.36513e-08,1.0
-chr1	7863803	.	TAAGATTAAGATTAAGAT	.	.	.	END=7863820;RU=taagat;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999948:3,3:3-3,3-3:17,21,0,0:3,17:NULL:268.794:366.612,131.36:0.0,0.0:0.0,5.8172e-05,0.999942	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.778:326.675,113.385:0.0,0.0:0.0,8.92912e-07,1.0
-chr1	7867431	.	AAACAAACAAACAAAC	.	.	.	END=7867446;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:34,12,0,0:4,34:NULL:255.579:366.612,131.36:0.0990099,0.0990099:0.0,5.22199e-10,1.0	0/0:44:1.0:4,4:4-4,4-4:25,16,0,3:4,25:2,2|3,1:271.543:326.675,113.385:0.0,0.0:0.0,1.07199e-07,1.0
-chr1	7871205	.	ATTTATTTATTTATTTATTT	.	.	.	END=7871224;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:5,5:5-5,5-5:27,16,0,5:5,27:2,2|3,2|4,1:299.309:366.612,131.36:0.0,0.0:0.0,1.8124e-08,1.0	0/0:37:0.999962:5,5:5-5,5-5:17,13,0,7:5,17:3,4|4,3:240.395:326.675,113.385:0.0,0.0:0.0,3.07993e-05,0.999971
-chr1	7879267	.	AAGAAAGAAAGA	.	.	.	END=7879278;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.5:366.612,131.36:0.0,0.0:0.0,1.94776e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:26,7,0,3:3,26:2,3:185.156:326.675,113.385:0.0,0.0:0.0,3.62187e-08,1.0
-chr1	7881454	.	GACAGACAGACA	.	.	.	END=7881465;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995138:3,3:3-3,3-3:11,19,0,0:3,11:NULL:223.799:366.612,131.36:0.0,0.0:3.50654e-37,0.00251302,0.997495	0/0:51:1.0:3,3:3-3,3-3:29,18,0,4:3,29:2,4:308.153:326.675,113.385:0.0,0.0:0.0,5.51923e-09,1.0
-chr1	7883786	.	ATTTATTTATTTATTTATTTATTT	ATTT	.	.	END=7883809;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:31:0.999929:6,6:6-6,6-6:17,10,0,4:6,17:3,1|4,1|5,1|6,1:191.156:326.675,113.385:0.0,0.0:0.0,2.64831e-05,0.999978
-chr1	7887170	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=7887201;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:43:0.988754:8,8:6-8,6-8:26,13,0,4:6,2|8,24:4,1|6,2|7,1:278.17:326.675,113.385:0.904844,0.904844:0.0,0.0112725,0.988754
-chr1	7888946	.	GACAGACAGACA	.	.	.	END=7888957;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.615416:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6225:366.612,131.36:0.0,0.0:8.99095e-14,0.154049,0.84603	0/0:39:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:210.054:326.675,113.385:0.0,0.0:0.0,1.55212e-08,1.0
-chr1	7891093	.	ATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATAT	.	.	END=7891130;RU=at;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0554638:18,18:17-20,17-20:0,15,0,2:NULL:12,2:149.827:366.612,131.36:1.15947,1.15947:0.220319,0.514231,0.265508	0/0:12:0.647398:19,19:18-22,18-22:6,4,0,0:19,6:NULL:62.7653:326.675,113.385:1.28538,1.28538:2.63552e-05,0.140772,0.859295
-chr1	7891383	.	TGTTTTGTTTTGTTT	.	.	.	END=7891397;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:243.922:366.612,131.36:0.0,0.0:0.0,1.33914e-07,1.0	0/0:25:0.999915:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.421:326.675,113.385:0.0,0.0:0.0,5.49623e-05,0.999948
-chr1	7892968	.	AATAATAATAAT	.	.	.	END=7892979;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:201.513:366.612,131.36:0.0,0.0:0.0,4.54687e-06,0.999995	0/0:33:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:180.598:326.675,113.385:0.0,0.0:0.0,7.9396e-07,1.0
-chr1	7895098	.	TTTTGTTTTGTTTTG	.	.	.	END=7895112;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.395108:3,3:1-3,1-3:3,22,0,0:3,3:NULL:218.472:366.612,131.36:0.734944,0.734944:2.0804e-10,0.469974,0.530126	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:242.509:326.675,113.385:0.0,0.0:0.0,1.08537e-07,1.0
-chr1	7898220	.	ATAGATAGATAG	.	.	.	END=7898231;RU=atag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,12,0,3:3,23:2,3:218.714:366.612,131.36:0.0,0.0:0.0,2.8081e-07,1.0	0/0:42:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:272.183:326.675,113.385:0.0,0.0:0.0,1.8962e-06,1.0
-chr1	7902277	.	CTCTCTTGCTCTCTTGCTCTCTTGCTCTCTTG	.	.	.	END=7902308;RU=ctctcttg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999986:4,4:4-4,4-4:18,24,0,6:4,18:2,1|3,5:336.429:366.612,131.36:0.0,0.0:0.0,2.38834e-05,0.999979	0/0:40:0.999988:4,4:4-4,4-4:19,18,0,3:4,19:3,3:267.977:326.675,113.385:0.0,0.0:0.0,2.09661e-05,0.999979
-chr1	7902333	.	CTCTCCTCTCCTCTC	.	.	.	END=7902347;RU=ctctc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999995:3,3:3-3,3-3:19,17,0,0:3,19:NULL:233.639:366.612,131.36:0.0,0.0:0.0,1.28276e-05,0.999987	0/0:37:1.0:3,3:3-3,3-3:22,13,0,2:3,22:2,2:226.959:326.675,113.385:0.0,0.0:0.0,1.32696e-06,1.0
-chr1	7902723	.	CACCCCACCCCACCCCACCC	.	.	.	END=7902742;RU=caccc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999145:4,4:4-4,4-4:13,15,0,3:4,13:3,2|4,1:210.981:366.612,131.36:0.0,0.0:0.0,0.000394074,0.999607	0/0:33:0.999912:4,4:4-4,4-4:16,14,0,3:4,16:3,3:212.011:326.675,113.385:0.0,0.0:0.0,5.59225e-05,0.999947
-chr1	7904296	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7904335;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99201:9,9:8-9,8-9:15,10,0,7:8,2|9,13:4,2|5,1|6,2|7,2:215.141:366.612,131.36:0.169767,0.169767:1.0,0.0,0.0	0/2:33:0.704436:20,21:19-20,18-21:9,7,0,16:19,2|20,5|21,2:5,3|6,2|12,2|13,1|15,1|16,2|17,2|18,1|19,2:238.51:326.675,113.385:0.469854,0.98424:1.38315e-07,0.101529,0.898575
-chr1	7906023	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7906042;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999855:5,5:5-5,5-5:16,12,0,3:5,16:3,2|4,1:194.783:366.612,131.36:0.0,0.0:0.0,6.73828e-05,0.999933	0/0:37:1.0:5,5:5-5,5-5:24,6,0,7:5,24:2,1|3,4|4,2:198.611:326.675,113.385:0.0,0.0:0.0,1.73549e-07,1.0
-chr1	7909399	.	TCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7909410;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:38:0.316243:3,14:3-3,14-16:15,17,0,6:3,15:2,2|14,4:267.265:366.612,131.36:0.0,1.27219:0.0,2.12252e-29,1.0	0/1:16:0.290253:3,14:3-3,3-15:5,9,0,2:3,5:13,1|14,1:119.213:326.675,113.385:0.0,4.03871:2.8659e-27,6.00102e-14,1.0
-chr1	7915045	.	GTGTGTGTGTGT	GTGTGTGTGTGTGT	.	.	END=7915056;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999418:7,7:6-10,6-10:14,23,0,3:7,14:5,1|6,1|7,1:282.392:366.612,131.36:1.3654,1.3654:0.0,8.56386e-05,0.999917	0/0:29:0.965444:6,6:6-8,6-8:9,18,0,0:6,9:NULL:198.063:326.675,113.385:0.856192,0.856192:9.95762e-17,0.0222382,0.977805
-chr1	7926986	.	CAAAACAAAACAAAACAAAACAAAACAAAA	CAAAA	.	.	END=7927015;RU=caaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:56:1.0:6,6:6-6,6-6:27,24,0,5:6,27:2,1|3,2|4,1|5,1:368.58:326.675,113.385:0.0,0.0:0.0,5.05438e-08,1.0
-chr1	7937066	.	ACACACACACACAC	.	.	.	END=7937079;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:22:0.999137:7,7:7-8,7-8:14,5,0,2:7,14:5,2:116.11:326.675,113.385:0.253975,0.253975:5.97146e-25,0.000346904,0.999658
-chr1	7937514	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT	.	.	END=7937567;RU=gt;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:0.848815:27,27:25-27,25-27:7,9,0,12:27,7:4,1|11,1|12,1|13,1|16,2|17,1|19,1|20,1|21,1|23,2:208.109:326.675,113.385:0.669764,0.669764:4.12169e-09,0.0626275,0.937463
-chr1	7939725	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC	.	.	END=7939776;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:46:0.598119:26,26:23-26,23-26:4,21,0,20:26,4:5,1|6,3|7,1|8,1|9,3|11,1|15,1|16,1|18,1|19,1|20,2|21,1|25,2|26,1:369.806:326.675,113.385:1.00893,1.00893:6.09719e-14,0.206923,0.793123
-chr1	7939777	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7939814;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/2:31:0.342097:19,26:19-19,18-27:15,13,0,3:18,2|19,13:18,1|21,1|26,1:228.743:326.675,113.385:0.0,3.06477:5.61739e-33,5.98841e-12,1.0
-chr1	7967867	.	AAACAAACAAACAAACAAAC	.	.	.	END=7967886;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:5,5:5-5,5-5:23,16,0,2:5,23:3,1|4,1:254.919:366.612,131.36:0.0,0.0:0.0,7.37833e-07,1.0	0/0:28:0.997946:5,5:5-5,5-5:12,11,0,5:5,12:2,1|3,1|4,3:180.598:326.675,113.385:0.0,0.0:1.398e-42,0.000923213,0.999081
-chr1	7968753	.	AAGCAAGCAAGC	.	.	.	END=7968764;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999979:3,3:3-3,3-3:18,7,0,0:3,18:NULL:132.608:366.612,131.36:0.0,0.0:0.0,1.75045e-05,0.999986	0/0:15:0.96209:3,3:3-3,3-3:8,7,0,0:3,8:NULL:94.2688:326.675,113.385:0.0,0.0:3.25334e-27,0.0200543,0.979987
-chr1	7969719	.	AAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAAT	.	.	END=7969738;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.999939:6,6:6-6,6-6:17,9,0,3:6,17:3,1|5,2:167.937:366.612,131.36:0.0,0.0:0.0,9.13269e-06,0.999993	0/0:13:0.977978:5,5:5-5,5-5:9,4,0,0:5,9:NULL:72.6275:326.675,113.385:0.0,0.0:3.47392e-30,0.0125675,0.987461
-chr1	7986821	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7986852;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:9,9:9-9,9-9:19,13,0,9:9,19:3,2|5,1|6,3|8,3:265.268:366.612,131.36:0.0,0.0:0.0,1.16032e-06,1.0	0/0:43:0.999515:8,8:8-8,8-8:14,14,0,15:8,14:3,2|4,1|5,5|6,4|7,3:291.605:326.675,113.385:0.0,0.0:2.75757e-38,0.000194398,0.99981
-chr1	8003962	.	TTGTTTGTTTGT	.	.	.	END=8003973;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999578:3,3:3-3,3-3:15,10,0,0:3,15:NULL:156.054:366.612,131.36:0.0,0.0:0.0,0.000284195,0.999719	0/0:16:0.883694:3,3:3-3,3-3:6,10,0,0:3,6:NULL:118.129:326.675,113.385:0.0,0.0:9.06063e-21,0.0639908,0.936099
-chr1	8004898	.	AAGGAAGGAAGG	.	.	.	END=8004909;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:23,25,0,2:3,23:2,2:337.579:366.612,131.36:0.0,0.0:0.0,7.4372e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:213.394:326.675,113.385:0.0,0.0:0.0,8.8998e-06,0.999994
-chr1	8005269	.	TTTATTTATTTA	.	.	.	END=8005280;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:24,30,0,5:3,24:2,5:403.316:366.612,131.36:0.0,0.0:0.0,1.95327e-07,1.0	0/0:36:0.999995:3,3:3-3,3-3:20,16,0,0:3,20:NULL:233.918:326.675,113.385:0.0,0.0:0.0,1.32684e-05,0.999987
-chr1	8005894	.	GTGTGTGTGTGTGT	.	.	.	END=8005907;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.993775:7,7:7-7,7-7:11,10,0,3:7,11:5,1|6,2:160.454:366.612,131.36:0.0,0.0:1.51517e-20,0.00212715,0.997881	0/0:32:0.99969:7,7:7-8,7-8:15,12,0,4:7,15:4,1|6,3:200.321:326.675,113.385:0.270063,0.270063:6.405e-28,0.000103737,0.999896
-chr1	8015093	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG,GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	END=8015152;RU=ggag;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.246659:9,15:9-16,12-16:2,24,0,3:15,2:9,2|14,1:252.076:366.612,131.36:2.22065,1.22596:0.000347671,0.806366,0.193342	2/2:9:0.0494967:12,12:8-12,8-12:0,3,0,6:NULL:3,1|6,1|8,1|11,1|12,2:70.3561:326.675,113.385:1.30046,1.30046:0.676946,0.294354,0.028742
-chr1	8015152	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=8015183;RU=ggaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.993505:8,8:8-10,8-10:12,25,0,0:8,12:NULL:283.844:366.612,131.36:0.817177,0.817177:1.32354e-28,0.00572351,0.994293	0/0:22:0.999814:8,8:8-10,8-10:16,2,0,3:8,16:3,1|7,2:105.387:326.675,113.385:0.797014,0.797014:1.31413e-38,5.16073e-05,0.999949
-chr1	8015590	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8015635;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:17:0.78673:16,17:16-17,16-17:5,7,0,5:16,3|17,2:4,1|6,1|7,1|15,2:131.804:366.612,131.36:0.374147,0.374147:1.0,0.0,0.0	0/3:24:0.654856:23,24:22-23,21-24:11,7,0,5:22,3|23,6|24,2:4,1|5,2|6,1|12,1:164.248:326.675,113.385:0.429525,0.920845:3.63768e-08,0.076716,0.923377
-chr1	8018726	.	CTGCTGCTGCTG	.	.	.	END=8018737;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:255.397:366.612,131.36:0.0,0.0:0.0,6.28587e-07,1.0	0/0:43:1.0:4,4:4-4,4-4:22,21,0,0:4,22:NULL:268.061:326.675,113.385:0.0,0.0:0.0,2.23241e-06,1.0
-chr1	8019993	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8020020;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:0.999518:11,11:10-11,10-11:30,16,0,5:10,4|11,24|12,2:4,1|5,1|7,2|8,1:325.381:366.612,131.36:0.270063,0.270063:1.0,6.34455e-09,0.0	0/0:47:0.999506:14,14:14-15,14-15:26,15,0,6:13,3|14,21|15,2:4,1|5,1|7,1|9,1|12,2:312.639:326.675,113.385:0.195027,0.195027:3.34035e-27,0.000366867,0.999636
-chr1	8023350	.	TGATGATGATGA	.	.	.	END=8023361;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:232.112:366.612,131.36:0.0,0.0:0.0,4.19874e-08,1.0	0/0:32:0.999993:4,4:4-4,4-4:19,13,0,0:4,19:NULL:194.258:326.675,113.385:0.0,0.0:0.0,1.44639e-05,0.999986
-chr1	8028124	.	ACACACACACACACAC	.	.	.	END=8028139;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.246956:8,8:8-8,8-8:2,0,0,0:8,2:NULL:7.97734:366.612,131.36:0.0,0.0:6.89451e-05,0.374285,0.625703	0/0:47:1.0:8,8:8-8,8-8:28,12,0,7:8,28:5,2|6,1|7,4:281.72:326.675,113.385:0.0,0.0:0.0,1.34757e-08,1.0
-chr1	8035149	.	GTGTGTGTGTGTGT	.	.	.	END=8035162;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:7,7:7-7,7-7:20,15,0,2:7,20:5,2:233.838:366.612,131.36:0.139319,0.139319:5.08562e-39,5.57218e-06,0.999995	0/0:49:1.0:7,7:7-7,7-7:30,17,0,2:7,30:6,2:300.087:326.675,113.385:0.0,0.0:0.0,8.81438e-09,1.0
-chr1	8039355	.	GTGGGTGGGTGG	.	.	.	END=8039366;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:1.0:3,3:3-3,3-3:40,25,0,0:3,40:NULL:385.189:366.612,131.36:0.0,0.0:0.0,5.97085e-12,1.0	0/0:66:1.0:3,3:3-3,3-3:51,11,0,4:3,51:2,4:327.464:326.675,113.385:0.0,0.0:0.0,1.1277e-15,1.0
-chr1	8039460	.	ATACATACATACATACATACATAC	ATACATACATACATACATAC	.	.	END=8039483;RU=atac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:5,5:5-5,5-5:30,17,0,7:5,30:2,3|3,1|4,3:325.203:366.612,131.36:0.0,0.0:1.0,3.32293e-09,0.0	0/0:51:1.0:6,6:6-6,6-6:28,15,0,8:6,28:2,2|3,2|4,2|5,2:306.503:326.675,113.385:0.0,0.0:0.0,1.9037e-08,1.0
-chr1	8047704	.	TGGTTGGTTGGT	.	.	.	END=8047715;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:355.566:366.612,131.36:0.0,0.0:0.0,2.55212e-08,1.0	0/0:44:1.0:3,3:3-3,3-3:32,12,0,0:3,32:NULL:233.934:326.675,113.385:0.0,0.0:0.0,1.47459e-09,1.0
-chr1	8053368	.	AAATAAATAAAT	.	.	.	END=8053379;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:219.592:366.612,131.36:0.0,0.0:0.0,1.6413e-06,1.0	0/0:20:0.995495:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.957:326.675,113.385:0.0,0.0:2.08069e-37,0.0027254,0.997283
-chr1	8057815	.	TTTATTTATTTA	.	.	.	END=8057826;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999994:3,3:3-3,3-3:19,11,0,0:3,19:NULL:174.251:366.612,131.36:0.0,0.0:0.0,1.34549e-05,0.999987	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:210.317:326.675,113.385:0.0,0.0:0.0,5.71642e-06,0.999995
-chr1	8058525	.	CTACTACTACTA	.	.	.	END=8058536;RU=cta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:24,13,0,0:4,24:NULL:219.275:366.612,131.36:0.0,0.0:0.0,5.10952e-07,1.0	0/0:34:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:202.493:326.675,113.385:0.0,0.0:0.0,6.14543e-06,0.999995
-chr1	8058938	.	TTGGTTGGTTGG	.	.	.	END=8058949;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:33,17,0,2:3,33:2,2:298.514:366.612,131.36:0.0,0.0:0.0,7.62773e-10,1.0	0/0:45:0.999986:3,3:3-3,3-3:19,26,0,0:3,19:NULL:314.665:326.675,113.385:0.0,0.0:0.0,2.32134e-05,0.999979
-chr1	8061760	.	TTTATTTATTTA	.	.	.	END=8061771;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:203.399:366.612,131.36:0.0,0.0:0.0,9.55518e-06,0.999993	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:209.233:326.675,113.385:0.0,0.0:0.0,1.0808e-07,1.0
-chr1	8063311	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8063358;RU=ct;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.366873:24,24:20-29,20-29:7,9,0,2:23,2|24,5:6,1|12,1:140.755:366.612,131.36:3.03436,3.03436:6.45338e-06,0.549389,0.450712	0/1:32:0.942422:24,25:23-24,23-26:13,11,0,6:23,3|24,7|25,3:5,2|10,1|18,2|24,1:231.017:326.675,113.385:0.253975,0.85905:5.17546e-17,0.0127168,0.987312
-chr1	8063359	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA	.	.	END=8063386;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:26:0.975883:14,18:14-19,16-20:10,10,0,3:14,5|18,3|19,2:5,1|6,1|9,1:178.02:366.612,131.36:1.13054,0.860418:2.49471e-18,7.04711e-09,1.0	0/0:33:0.998811:14,14:13-14,13-14:13,12,0,7:14,13:5,1|7,1|10,2|12,2|13,1:226.441:326.675,113.385:0.253975,0.253975:1.41554e-22,0.000607714,0.999394
-chr1	8066722	.	CATGCATGCATG	.	.	.	END=8066733;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:19,9,0,3:3,19:2,3:177.705:366.612,131.36:0.0,0.0:0.0,2.81014e-06,1.0	0/0:22:0.999638:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.182:326.675,113.385:0.0,0.0:0.0,0.000209397,0.999795
-chr1	8068975	.	ATTCATTCATTC	.	.	.	END=8068986;RU=attc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:274.872:366.612,131.36:0.0,0.0:0.0,8.47198e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:146.035:326.675,113.385:0.0,0.0:0.0,2.6369e-07,1.0
-chr1	8075123	.	CTCCCTCCCTCC	.	.	.	END=8075134;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.99998:3,3:3-3,3-3:18,19,0,4:3,18:2,4:270.132:366.612,131.36:0.0,0.0:0.0,1.23562e-05,0.999987	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:248.856:326.675,113.385:0.0,0.0:0.0,1.1653e-07,1.0
-chr1	8083970	.	GTGTGTGTGTGT	.	.	.	END=8083981;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:6,6:6-6,6-6:28,18,0,2:6,28:4,1|5,1:289.967:366.612,131.36:0.139319,0.139319:0.0,2.06437e-08,1.0	0/0:53:1.0:6,6:6-6,6-6:33,20,0,0:6,33:NULL:306.839:326.675,113.385:0.0,0.0:0.0,1.10416e-09,1.0
-chr1	8091175	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8091222;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.957696:25,26:25-26,25-26:7,9,0,7:25,3|26,4:4,1|6,1|7,1|10,1|11,2|22,1:176.37:366.612,131.36:0.40582,0.236383:1.10855e-12,0.00186889,0.998139	0/0:32:0.641589:24,24:23-24,23-24:13,12,0,7:23,3|24,10:11,1|16,1|17,1|19,3|23,1:225.676:326.675,113.385:0.491073,0.491073:6.05201e-11,0.357067,0.642976
-chr1	8093608	.	AGAAAGAAAGAA	.	.	.	END=8093619;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:188.384:366.612,131.36:0.0,0.0:0.0,4.88905e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:220.726:326.675,113.385:0.0,0.0:0.0,6.07462e-08,1.0
-chr1	8095889	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8095942;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:0.99954:15,15:15-15,15-15:26,23,0,14:14,4|15,22:5,1|8,3|9,1|11,1|12,3|13,3|14,1|15,1:440.902:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/2:69:0.276807:27,36:27-27,9-36:14,20,0,33:26,3|27,9|28,2:5,2|6,1|8,1|9,1|11,3|12,2|13,1|14,1|15,2|16,1|17,1|18,1|19,1|20,1|21,4|22,1|24,1|25,2|26,2|27,1|29,1|30,1|34,1:534.626:326.675,113.385:0.0990099,7.57372:7.14644e-35,2.33556e-10,1.0
-chr1	8098070	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=8098089;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999434:4,4:4-4,4-4:14,27,0,4:4,14:2,1|3,3:319.267:366.612,131.36:0.0,0.0:0.0,0.000306516,0.999697	0/0:31:0.999931:4,4:4-4,4-4:17,12,0,2:4,17:3,2:191.621:326.675,113.385:0.0,0.0:0.0,3.87537e-05,0.999963
-chr1	8099157	.	ATATATATATATATATATATATATATATAT	AT,ATAT	.	.	END=8099186;RU=at;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:8:0.00773839:1,2:1-7,1-7:0,8,0,0:NULL:NULL:69.9445:366.612,131.36:2.05187,2.03604:0.389323,0.503565,0.107215	0/0:14:0.884329:15,15:13-18,13-18:8,2,0,0:15,8:NULL:53.528:326.675,113.385:1.0936,1.0936:4.83461e-07,0.0599293,0.940159
-chr1	8099251	.	TTTGTTTGTTTGTTTG	.	.	.	END=8099266;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:4,4:4-4,4-4:20,7,0,0:4,20:NULL:140.623:366.612,131.36:0.0,0.0:0.0,6.8825e-06,0.999994	0/0:18:0.999251:4,4:4-4,4-4:14,4,0,0:4,14:NULL:88.6924:326.675,113.385:0.0,0.0:1e-45,0.000424862,0.999576
-chr1	8104863	.	AGGAAGGAAGGA	.	.	.	END=8104874;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.99993:3,3:3-3,3-3:17,17,0,2:3,17:2,2:242.556:366.612,131.36:0.0,0.0:0.0,3.98932e-05,0.999963	0/0:52:1.0:3,3:3-3,3-3:23,27,0,2:3,23:2,2:352.532:326.675,113.385:0.0,0.0:0.0,5.92066e-07,1.0
-chr1	8108241	.	TCTTCTTCTTCT	.	.	.	END=8108252;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:32,17,0,0:4,32:NULL:287.673:366.612,131.36:0.0,0.0:0.0,3.52764e-09,1.0	0/0:33:0.999976:4,4:4-4,4-4:19,14,0,0:4,19:NULL:206.848:326.675,113.385:0.0,0.0:0.0,3.39215e-05,0.99997
-chr1	8108409	.	TCTTTCTTTCTT	.	.	.	END=8108420;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:35,21,0,3:3,35:2,3:354.824:366.612,131.36:0.0,0.0:0.0,9.24194e-11,1.0	0/0:46:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:237.13:326.675,113.385:0.0,0.0:0.0,2.04546e-10,1.0
-chr1	8109627	.	ATATATATATATAT	.	.	.	END=8109640;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999854:7,7:7-7,7-7:17,16,0,0:7,17:NULL:222.961:366.612,131.36:0.0,0.0:6.85001e-22,9.72556e-05,0.999903	0/0:30:1.0:7,7:7-7,7-7:20,6,0,2:7,20:4,2:150.079:326.675,113.385:0.0,0.0:7.87813e-26,1.11203e-05,0.999993
-chr1	8111389	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8111422;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:52:0.92424:20,21:20-20,20-21:19,12,0,20:19,3|20,16:5,1|6,2|7,2|8,1|9,3|11,1|12,2|13,2|15,1|16,1|17,2|21,2:374.466:366.612,131.36:0.0,0.298675:0.0,2.51775e-16,1.0	1/0:43:0.771566:13,17:13-17,17-17:15,13,0,15:13,2|16,3|17,10:6,2|8,2|9,2|10,2|11,2|12,3|16,2:324.918:326.675,113.385:1.82038,0.0:4.76351e-10,0.91326,0.0868381
-chr1	8113654	.	TATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=8113685;RU=tatt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.880564:10,10:10-10,10-10:6,11,0,10:10,6:2,1|3,2|5,3|6,2|8,2:199.947:366.612,131.36:0.0,0.0:1.30764e-35,0.0149906,0.985039	0/0:41:0.999572:8,8:7-8,7-8:14,18,0,8:8,14:3,1|4,1|5,2|7,3|8,1:281.979:326.675,113.385:0.345543,0.345543:0.0,0.000167456,0.999834
-chr1	8114127	.	TTGTTTGTTTGT	.	.	.	END=8114138;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:26,17,0,4:3,26:2,4:286.37:366.612,131.36:0.0,0.0:0.0,4.42697e-08,1.0	0/0:30:0.999927:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.804:326.675,113.385:0.0,0.0:0.0,5.3239e-05,0.999948
-chr1	8114704	.	TTAATTAATTAATTAA	.	.	.	END=8114719;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.99981:4,4:4-4,4-4:16,23,0,0:4,16:NULL:277.303:366.612,131.36:0.0,0.0:0.0,0.000160105,0.999842	0/0:26:0.999136:4,4:4-4,4-4:14,12,0,0:4,14:NULL:164.933:326.675,113.385:0.0,0.0:1.562e-42,0.000666524,0.999339
-chr1	8115132	.	AAATAAATAAAT	.	.	.	END=8115143;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999857:3,3:3-3,3-3:17,11,0,0:3,17:NULL:175.865:366.612,131.36:0.0,0.0:0.0,0.000104486,0.999896	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.987:326.675,113.385:0.0,0.0:0.0,2.60132e-07,1.0
-chr1	8115975	.	AGAAAGAAAGAA	.	.	.	END=8115986;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999882:3,3:3-3,3-3:16,14,0,0:3,16:NULL:201.072:366.612,131.36:0.0,0.0:0.0,8.62163e-05,0.999917	0/0:34:1.0:3,3:3-3,3-3:22,12,0,0:3,22:NULL:198.796:326.675,113.385:0.0,0.0:0.0,1.41773e-06,1.0
-chr1	8116438	.	GTTGTTGTTGTTGTT	.	.	.	END=8116452;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999999:5,5:5-5,5-5:18,13,0,3:5,18:4,2|5,1:213.382:366.612,131.36:0.0,0.0:0.0,7.17428e-06,0.999994	0/0:23:0.986297:5,5:5-5,5-5:10,13,0,0:5,10:NULL:158.594:326.675,113.385:0.0,0.0:1.25291e-30,0.00974018,0.990283
-chr1	8119064	.	TTTGTTTGTTTG	.	.	.	END=8119075;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:227.549:366.612,131.36:0.0,0.0:0.0,2.36075e-06,1.0	0/0:39:1.0:3,3:3-3,3-3:29,10,0,0:3,29:NULL:209.031:326.675,113.385:0.0,0.0:0.0,9.50918e-09,1.0
-chr1	8122477	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8122534;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:66:0.963354:19,19:19-20,19-20:18,28,0,19:18,2|19,14|20,2:5,2|7,3|8,1|13,2|14,4|15,1|16,1|17,2|18,3:500.719:366.612,131.36:0.369666,0.369666:1.0,0.0,0.0	0/0:48:0.327823:29,29:27-30,27-30:3,22,0,20:29,3:4,1|5,3|7,2|8,1|10,1|13,1|14,1|15,2|16,1|18,1|19,1|20,3|25,1|27,1:374.998:326.675,113.385:1.16277,1.16277:9.19554e-05,0.424578,0.575422
-chr1	8122771	.	ATCTATCTATCT	.	.	.	END=8122782;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:30,24,0,3:3,30:2,3:360.085:366.612,131.36:0.0,0.0:0.0,4.51023e-09,1.0	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:225.757:326.675,113.385:0.0,0.0:0.0,4.68736e-07,1.0
-chr1	8130079	.	ATCTATCTATCT	.	.	.	END=8130090;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:20,17,0,3:3,20:2,3:256.317:366.612,131.36:0.0,0.0:0.0,2.22684e-06,1.0	0/0:52:1.0:3,3:3-3,3-3:30,20,0,2:3,30:2,2:316.916:326.675,113.385:0.0,0.0:0.0,2.97695e-09,1.0
-chr1	8130171	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8130210;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999032:15,15:15-15,15-15:16,8,0,4:15,16:12,2|13,1|15,1:175.304:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.891619:20,20:18-20,18-20:10,15,0,7:19,2|20,8:6,1|8,1|11,3|12,1|19,1:251.968:326.675,113.385:0.62211,0.62211:3.15234e-10,0.0847739,0.915325
-chr1	8132817	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8132848;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.346622:22,22:20-22,20-22:6,19,0,16:21,2|22,4:4,1|5,1|6,1|7,1|8,3|10,1|11,1|12,2|15,1|17,2|21,2:336.438:366.612,131.36:0.623841,0.623841:0.0,0.0,1.0	0/0:28:0.958789:16,16:15-16,15-16:14,11,0,3:15,3|16,11:11,1|12,1|13,1:192.157:326.675,113.385:0.21692,0.21692:1.2706e-12,0.0390885,0.960981
-chr1	8135933	.	TATTTTATTTTATTT	.	.	.	END=8135947;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999845:3,3:3-3,3-3:16,14,0,0:3,16:NULL:187.842:366.612,131.36:0.0,0.0:0.0,8.98638e-05,0.999911	0/0:17:0.95758:3,3:3-3,3-3:8,9,0,0:3,8:NULL:112.795:326.675,113.385:0.0,0.0:1.3255e-26,0.025304,0.974748
-chr1	8136804	.	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	END=8136863;RU=ttgtt;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.0353704:19,19:12-19,12-19:0,17,0,20:NULL:3,2|4,4|5,1|7,2|8,1|10,3|11,2|13,1|14,1|18,3:295.425:366.612,131.36:1.8477,1.8477:0.0,0.0,1.0	0/0:47:0.999732:12,12:12-12,12-12:15,18,0,14:12,15:3,1|4,4|7,2|8,3|9,1|11,3:335.976:326.675,113.385:0.0,0.0:3e-45,0.000192081,0.999811
-chr1	8138672	.	AGCAGCAGCAGC	.	.	.	END=8138683;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:1.0:4,4:4-4,4-4:34,37,0,3:4,34:3,3:490.06:366.612,131.36:0.0,0.0:0.0,4.72644e-10,1.0	0/0:44:1.0:4,4:4-4,4-4:36,8,0,0:4,36:NULL:220.562:326.675,113.385:0.0,0.0:0.0,1.65479e-10,1.0
-chr1	8149815	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATA	.	.	END=8149860;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.759141:8,8:7-8,7-8:6,9,0,0:8,6:NULL:105.876:366.612,131.36:0.253975,0.253975:1.0,0.0,0.0	0/0:10:0.200773:23,23:22-24,22-24:2,4,0,2:23,2:6,1|12,1:61.958:326.675,113.385:0.828495,0.828495:0.00693742,0.433048,0.560128
-chr1	8152098	.	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	TTTATTTA	.	.	END=8152145;RU=ttta;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.6329:2,2:2-2,2-2:3,9,0,0:2,3:NULL:88.3409:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:27:0.98957:12,12:12-12,12-12:10,8,0,9:12,10:4,1|5,1|6,1|7,1|8,2|10,1|11,2:181.088:326.675,113.385:0.0,0.0:2.07029e-22,0.00534625,0.994669
-chr1	8163528	.	GAGAGGAGAGGAGAG	.	.	.	END=8163542;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999637:3,3:3-3,3-3:15,24,0,0:3,15:NULL:276.149:366.612,131.36:0.0,0.0:1.4e-44,0.000315992,0.999689	0/0:19:0.982968:3,3:3-3,3-3:9,10,0,0:3,9:NULL:130.81:326.675,113.385:0.0,0.0:3.91995e-27,0.0109445,0.989081
-chr1	8167006	.	AATTTAATTTAATTT	.	.	.	END=8167020;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:26,17,0,3:3,26:2,3:278.626:366.612,131.36:0.0,0.0:0.0,7.90845e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:170.283:326.675,113.385:0.0,0.0:0.0,9.03986e-08,1.0
-chr1	8167756	.	ATATATATATATAT	ATATATATATATATAT	.	.	END=8167769;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999899:7,7:7-7,7-7:17,12,0,0:7,17:NULL:188.649:366.612,131.36:0.0,0.0:2.91558e-24,5.57885e-05,0.999948	0/1:14:0.748426:7,8:7-7,7-8:9,5,0,0:7,7|8,2:NULL:86.5737:326.675,113.385:0.0,0.498798:2.74331e-13,0.00406086,0.995952
-chr1	8169940	.	AAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAAT	.	.	END=8169959;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:6,6:6-6,6-6:20,26,0,8:6,20:2,2|3,2|4,3|5,1:374.098:366.612,131.36:0.0,0.0:0.0,2.79208e-06,1.0	0/0:39:1.0:5,5:5-5,5-5:25,10,0,4:5,25:3,2|4,2:223.984:326.675,113.385:0.0,0.0:0.0,1.14854e-07,1.0
-chr1	8172972	.	CTTTCTTTCTTT	.	.	.	END=8172983;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999871:3,3:3-3,3-3:16,9,0,0:3,16:NULL:140.907:366.612,131.36:0.0,0.0:0.0,7.42312e-05,0.999926	0/0:28:0.999983:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.497:326.675,113.385:0.0,0.0:0.0,2.2279e-05,0.999979
-chr1	8173983	.	ATAAATAAATAA	.	.	.	END=8173994;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:20,9,0,2:3,20:2,2:177.08:366.612,131.36:0.0,0.0:0.0,4.86084e-06,0.999995	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.598:326.675,113.385:0.0,0.0:0.0,5.37023e-06,0.999995
-chr1	8174320	.	AGGAAGGAAGGA	.	.	.	END=8174331;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999648:3,3:3-3,3-3:15,12,0,0:3,15:NULL:172.893:366.612,131.36:0.0,0.0:0.0,0.000194825,0.999805	0/0:38:1.0:3,3:2-3,2-3:26,9,0,2:3,26:2,2:199.81:326.675,113.385:0.253975,0.253975:0.0,4.32072e-08,1.0
-chr1	8177036	.	AGGGAGGGAGGG	.	.	.	END=8177047;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999978:3,3:3-3,3-3:18,21,0,0:3,18:NULL:260.815:366.612,131.36:0.0,0.0:0.0,2.8336e-05,0.999972	0/0:22:0.997989:3,3:3-3,3-3:12,10,0,0:3,12:NULL:134.192:326.675,113.385:0.0,0.0:6.5965e-41,0.000969514,0.999035
-chr1	8179090	.	ACACACACACAC	ACACACACACACACAC	.	.	END=8179101;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999393:8,8:8-9,8-9:14,13,0,2:8,14:7,1|8,1:193.538:366.612,131.36:0.311527,0.311527:0.0,9.19338e-05,0.99991	0/0:40:1.0:6,6:6-14,6-14:29,8,0,2:6,29:5,1|6,1:207.577:326.675,113.385:3.72193,3.72193:0.0,5.69252e-09,1.0
-chr1	8183007	.	AAAGAAAGAAAG	.	.	.	END=8183018;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999844:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.479:366.612,131.36:0.0,0.0:0.0,7.54248e-05,0.999926	0/0:19:0.99913:3,3:3-3,3-3:13,6,0,0:3,13:NULL:108.628:326.675,113.385:0.0,0.0:3.9e-44,0.000489509,0.999514
-chr1	8186005	.	GAGAGAGAGAGAGAGAGAGAGAGA	GA	.	.	END=8186028;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0280876:1,1:1-6,1-6:0,20,0,0:NULL:NULL:187.222:366.612,131.36:1.59716,1.59716:0.784559,0.206896,0.00860633	0/0:44:0.962329:12,12:12-14,12-14:17,21,0,5:11,2|12,13|13,2:5,1|6,1|9,3:321.879:326.675,113.385:0.681228,0.681228:4.07662e-16,0.00669391,0.993323
-chr1	8198691	.	AAACAAACAAAC	.	.	.	END=8198702;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:25,27,0,0:3,25:NULL:345.572:366.612,131.36:0.0,0.0:0.0,1.38727e-07,1.0	0/0:61:1.0:3,3:3-3,3-3:38,21,0,2:3,38:2,2:357.131:326.675,113.385:0.0,0.0:0.0,1.73423e-11,1.0
-chr1	8204150	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=8204173;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.911458:6,6:5-6,5-6:7,17,0,3:6,7:3,1|4,2:210.269:366.612,131.36:0.499387,0.499387:1.76364e-24,0.0691695,0.930922	0/0:31:0.999832:6,6:6-6,6-6:16,10,0,5:6,16:3,1|4,4:192.651:326.675,113.385:0.0,0.0:0.0,0.000111831,0.999888
-chr1	8206337	.	CCACCACCACCA	.	.	.	END=8206348;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999348:4,4:4-4,4-4:14,9,0,0:4,14:NULL:132.349:366.612,131.36:0.0,0.0:1.551e-42,0.000394259,0.999606	0/0:32:1.00001:4,4:4-4,4-4:22,10,0,0:4,22:NULL:178.452:326.675,113.385:0.0,0.0:0.0,1.7583e-06,1.0
-chr1	8223406	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8223453;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.864123:18,18:18-18,18-18:7,5,0,0:18,7:NULL:77.959:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:36:0.985847:24,24:24-25,24-25:11,11,0,12:24,11:4,1|5,1|6,4|11,1|14,1|17,1|18,1|21,1|23,1:244.728:326.675,113.385:0.195027,0.195027:3.05043e-12,0.00493001,0.995084
-chr1	8225347	.	TCCCTCCCTCCC	.	.	.	END=8225358;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999401:3,3:3-3,3-3:14,29,0,0:3,14:NULL:311.694:366.612,131.36:0.0,0.0:0.0,0.000475557,0.999529	0/0:43:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:233.175:326.675,113.385:0.0,0.0:0.0,4.43822e-09,1.0
-chr1	8227632	.	TCCTTCCTTCCT	TCCT	.	.	END=8227643;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:43:1.0:3,3:3-3,3-3:30,11,0,2:3,30:2,2:240.348:326.675,113.385:0.0,0.0:0.0,3.05243e-09,1.0
-chr1	8229590	.	TAATAATAATAA	.	.	.	END=8229601;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999907:4,4:4-4,4-4:18,24,0,0:4,18:NULL:291.457:366.612,131.36:0.0,0.0:0.0,7.27538e-05,0.999927	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:165.956:326.675,113.385:0.0,0.0:0.0,1.92415e-06,1.0
-chr1	8234581	.	CTCTCTCTCTCTCT	CT	.	.	END=8234594;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:39:0.999659:7,7:6-7,6-7:24,11,0,3:6,2|7,22:5,2|6,1:229.004:326.675,113.385:0.294378,0.294378:1e-45,0.000343236,0.999659
-chr1	8242991	.	TTGTTGTTGTTGTTG	TTG	.	.	END=8243005;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:31:0.999806:5,5:5-5,5-5:15,13,0,3:5,15:4,3:199.113:326.675,113.385:0.0,0.0:1.78e-43,0.000116566,0.999887
-chr1	8246899	.	AAGCAAGCAAGCAAGC	.	.	.	END=8246914;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999315:4,4:4-4,4-4:14,9,0,0:4,14:NULL:145.545:366.612,131.36:0.0,0.0:0.0,0.000468451,0.999537	0/0:48:1.0:4,4:4-4,4-4:30,15,0,3:4,30:2,1|3,2:274.711:326.675,113.385:0.0,0.0:0.0,5.01533e-09,1.0
-chr1	8246965	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	END=8247014;RU=aagaa;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.7408:8,8:8-8,8-8:5,2,0,0:8,5:NULL:39.8858:366.612,131.36:0.0,0.0:0.922423,0.0776716,9.9957e-14	0/0:40:0.898434:10,10:7-10,7-10:6,16,0,17:10,6:3,1|4,2|5,3|6,2|7,2|8,5|9,2:289.122:326.675,113.385:1.44541,1.44541:3.21687e-14,0.052063,0.948018
-chr1	8266031	.	GTGGTGGTGGTG	.	.	.	END=8266042;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:24,11,0,0:4,24:NULL:196.125:366.612,131.36:0.0,0.0:0.0,6.85821e-07,1.0	0/0:23:0.997056:4,4:4-4,4-4:12,11,0,0:4,12:NULL:151.09:326.675,113.385:0.0,0.0:2.38039e-40,0.00193777,0.99807
-chr1	8266249	.	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	CAAAA	.	.	END=8266303;RU=caaaa;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0719045:1,1:1-2,1-2:0,14,0,0:NULL:NULL:126.948:366.612,131.36:0.253975,0.253975:0.901064,0.0980899,0.000948109	0/0:32:0.985697:11,11:11-11,11-11:11,13,0,8:11,11:3,1|4,2|5,2|6,2|8,1:230.731:326.675,113.385:0.0,0.0:4.34179e-34,0.0130186,0.987009
-chr1	8266615	.	ACACACACACACACACACACACACACACACACACACACAC	ACAC,ACACAC,ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8266654;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:12:0.0212688:2,3:1-3,1-4:0,12,0,0:NULL:NULL:107.779:366.612,131.36:0.622425,0.8247:0.721107,0.265612,0.0133016	0/3:37:0.629295:20,21:19-20,19-21:16,11,0,10:19,4|20,9|21,3:4,1|7,2|11,1|13,1|14,1|15,1|16,1|19,2:266.552:326.675,113.385:0.253975,0.783868:6.61717e-12,0.131809,0.868288
-chr1	8277000	.	ACCCACCCACCC	.	.	.	END=8277011;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.285533:3,3:3-3,3-3:2,0,0,0:3,2:NULL:7.81672:366.612,131.36:0.0,0.0:1.6909e-06,0.28606,0.713946	0/0:23:0.932852:3,3:3-3,3-3:7,16,0,0:3,7:NULL:175.271:326.675,113.385:0.0,0.0:2.30008e-19,0.0474448,0.952631
-chr1	8279683	.	CTCTCTCTCTCT	CTCTCTCTCTCTCT	.	.	END=8279694;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999973:7,7:7-8,7-8:18,17,0,2:7,18:5,1|6,1:241.681:366.612,131.36:0.309,0.309:0.0,1.18429e-05,0.999987	0/0:46:1.0:6,6:6-6,6-6:31,15,0,0:6,31:NULL:262.196:326.675,113.385:0.0,0.0:0.0,5.96934e-09,1.0
-chr1	8279713	.	TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC	TCCTC	.	.	END=8279762;RU=tcctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0751248:1,1:1-2,1-2:0,15,0,0:NULL:NULL:131.48:366.612,131.36:0.195027,0.195027:0.893997,0.104919,0.00118645	0/0:48:0.892845:10,10:3-10,3-10:8,20,0,18:10,8:2,4|3,3|4,3|5,1|6,4|7,2|8,1:347.23:326.675,113.385:2.778,2.778:1.45748e-16,0.0949286,0.905171
-chr1	8280732	.	CACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=8280753;RU=ca;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.287648:25,25:23-26,23-26:2,13,0,18:25,2:6,1|7,2|9,2|10,2|13,2|14,1|15,2|16,1|20,1|21,1|23,2|24,1:272.998:366.612,131.36:1.32466,1.32466:0.0,0.0,1.0	0/0:32:0.929785:11,11:11-12,11-12:21,6,0,4:11,18|12,3:5,2|6,1|10,1:187.392:326.675,113.385:0.398507,0.398507:3.70661e-29,5.56129e-06,0.999995
-chr1	8282353	.	GGGTGGGTGGGT	.	.	.	END=8282364;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.468139:3,3:1-3,1-3:3,16,0,0:3,3:NULL:153.316:366.612,131.36:0.442786,0.442786:3.80222e-09,0.316452,0.683557	0/0:27:0.987199:3,3:3-3,3-3:10,17,0,0:3,10:NULL:188.791:326.675,113.385:0.0,0.0:2.35018e-28,0.00808223,0.991936
-chr1	8290480	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=8290543;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.996497:14,14:6-14,6-14:12,18,0,17:14,12:3,1|5,1|6,2|8,2|9,4|10,3|11,1|12,3:344.02:366.612,131.36:3.27122,3.27122:0.999507,0.000495853,6.86637e-24	0/0:45:0.997484:16,16:16-16,16-16:12,15,0,18:16,12:3,2|5,1|6,2|8,3|9,2|10,3|13,1|15,3|16,1:324.595:326.675,113.385:0.0,0.0:1.61841e-34,0.000532592,0.999469
-chr1	8290943	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=8291032;RU=tct;PERIOD=3;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0418623:28,28:18-28,18-28:0,6,0,12:NULL:7,1|9,1|11,1|16,2|17,1|18,1|22,2|23,1|27,2:147.29:366.612,131.36:3.92719,3.92719:0.730439,0.253303,0.0162825	0/0:31:0.280789:30,30:26-30,26-30:3,9,0,17:30,3:5,2|6,1|8,1|9,3|12,1|14,2|16,1|19,1|20,1|21,1|23,2|28,1:227.676:326.675,113.385:1.32066,1.32066:5.78395e-06,0.449715,0.550385
-chr1	8293500	.	TGGTGGTGGTGG	.	.	.	END=8293511;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:27,21,0,0:4,27:NULL:299.948:366.612,131.36:0.0,0.0:0.0,9.36759e-08,1.0	0/0:32:0.999984:4,4:4-4,4-4:19,13,0,0:4,19:NULL:192.347:326.675,113.385:0.0,0.0:0.0,2.57329e-05,0.999978
-chr1	8295438	.	CTGCCTGCCTGC	.	.	.	END=8295449;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:26,22,0,3:3,26:2,3:329.686:366.612,131.36:0.0,0.0:0.0,5.76648e-08,1.0	0/0:20:0.997312:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.932:326.675,113.385:0.0,0.0:2.08556e-37,0.00150062,0.998504
-chr1	8296427	.	GGTAGGTAGGTA	.	.	.	END=8296438;RU=ggta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:194.976:366.612,131.36:0.0,0.0:0.0,5.29213e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.415:326.675,113.385:0.0,0.0:0.0,1.54454e-07,1.0
-chr1	8303139	.	ACCACCACCACCACCACC	.	.	.	END=8303156;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999833:6,6:6-6,6-6:16,11,0,0:6,16:NULL:168.394:366.612,131.36:0.0,0.0:0.0,0.000115779,0.999887	0/0:26:0.999411:6,6:4-6,4-6:14,7,0,4:6,14:4,3|5,1:145.61:326.675,113.385:0.851255,0.851255:3.77311e-40,0.000251334,0.99975
-chr1	8303362	.	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	.	.	END=8303409;RU=ataa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999021:11,11:11-11,11-11:13,14,0,10:11,13:2,1|3,1|4,2|7,1|8,1|9,1|10,3:254.298:366.612,131.36:0.0,0.0:0.999378,0.000625603,1.9791e-22	0/0:24:0.571462:12,12:11-14,11-14:4,9,0,8:12,4:3,1|6,1|7,1|8,3|9,1|11,1:157.02:326.675,113.385:1.11535,1.11535:6.3577e-09,0.241148,0.758872
-chr1	8303901	.	AACAACAACAACAAC	AACAACAACAACAACAAC	.	.	END=8303915;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:1.0:5,6:5-5,6-6:23,13,0,0:5,16|6,7:NULL:229.551:366.612,131.36:0.0,0.172061:0.0,1.36785e-17,1.0	0/0:24:0.997124:5,5:5-5,5-5:12,10,0,2:5,12:4,2:160.303:326.675,113.385:0.0,0.0:7.74398e-31,0.00124512,0.998761
-chr1	8314805	.	AATAAAATAAAATAA	.	.	.	END=8314819;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:23,17,0,0:3,23:NULL:246.085:366.612,131.36:0.0,0.0:0.0,4.89499e-07,1.0	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:138.841:326.675,113.385:0.0,0.0:0.0,1.05149e-05,0.999993
-chr1	8314957	.	CACAACACAACACAA	.	.	.	END=8314971;RU=cacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:235.946:366.612,131.36:0.0,0.0:0.0,2.10711e-06,1.0	0/0:29:0.999999:3,3:3-3,3-3:18,9,0,2:3,18:2,1|3,1:165.01:326.675,113.385:0.0,0.0:0.0,7.22613e-06,0.999994
-chr1	8316961	.	TATATATATATATA	TATATATATA	.	.	END=8316974;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:1.00001:5,5:5-5,5-5:22,16,0,0:5,22:NULL:231.619:366.612,131.36:0.0,0.0:1.0,6.09319e-07,0.0	0/0:21:0.999463:7,7:7-8,7-8:15,5,0,0:7,15:NULL:108.023:326.675,113.385:0.195027,0.195027:4.76262e-23,0.000320093,0.999682
-chr1	8321168	.	TTTGTTTGTTTG	.	.	.	END=8321179;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999991:3,3:3-3,3-3:18,23,0,4:3,18:2,4:300.988:366.612,131.36:0.0,0.0:0.0,1.71594e-05,0.999986	0/0:26:0.93009:3,3:3-3,3-3:6,15,0,5:3,6:2,5:193.937:326.675,113.385:0.0,0.0:1.02792e-20,0.0346144,0.965449
-chr1	8322155	.	CAACAACAACAACAA	CAACAACAACAA	.	.	END=8322169;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.999751:4,4:4-4,4-4:16,7,0,0:4,16:NULL:128.369:366.612,131.36:0.0,0.0:0.999888,0.000111333,1.484e-42	0/0:33:1.0:5,5:5-5,5-5:24,7,0,2:5,24:3,1|4,1:173.71:326.675,113.385:0.0,0.0:0.0,2.6353e-07,1.0
-chr1	8322582	.	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	.	.	END=8322666;RU=tctgt;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.331779:13,13:10-13,10-13:3,13,0,0:13,3:NULL:137.248:366.612,131.36:1.20206,1.20206:1.0,0.0,0.0	0/0:48:0.889489:17,17:17-17,17-17:6,23,0,19:17,6:2,1|3,1|5,1|6,2|7,3|9,1|10,1|11,1|12,3|13,1|15,1|16,2|17,1:381.173:326.675,113.385:0.278639,0.278639:2.99727e-17,0.0723204,0.927774
-chr1	8325886	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=8325921;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:1.0:8,8:8-8,8-8:26,19,0,7:8,26:2,1|3,1|5,1|6,2|7,2:332.825:366.612,131.36:0.0,0.0:1.0,1.00529e-07,3e-45	0/0:31:0.985159:9,9:8-9,8-9:9,13,0,8:9,9:2,1|4,1|6,1|7,4|8,1:214.639:326.675,113.385:0.45695,0.45695:5.96041e-20,0.00861212,0.991405
-chr1	8328000	.	CAACAACAACAA	.	.	.	END=8328011;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:225.419:366.612,131.36:0.0,0.0:0.0,4.10969e-07,1.0	0/0:35:1.0:4,4:4-4,4-4:20,15,0,0:4,20:NULL:214.427:326.675,113.385:0.0,0.0:0.0,7.2502e-06,0.999994
-chr1	8329731	.	ATAAATAAATAA	.	.	.	END=8329742;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:35,24,0,0:3,35:NULL:359.0:366.612,131.36:0.0,0.0:0.0,2.54448e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:30,14,0,0:3,30:NULL:246.505:326.675,113.385:0.0,0.0:0.0,5.56693e-09,1.0
-chr1	8330089	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8330126;RU=ag;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.835824:20,20:20-20,20-20:6,7,0,3:20,6:7,1|12,1|19,1:115.104:366.612,131.36:0.0,0.0:2.33946e-18,0.027077,0.972978	0/0:30:0.705345:19,19:19-20,19-20:12,12,0,6:19,10|20,2:4,1|8,1|9,1|11,1|13,1|16,1:216.776:326.675,113.385:0.452422,0.452422:1.00315e-13,0.00259924,0.997406
-chr1	8331327	.	TGTCTGTCTGTC	.	.	.	END=8331338;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:3,3:3-3,3-3:23,24,0,2:3,23:2,2:322.453:366.612,131.36:0.0,0.0:0.0,6.30554e-07,1.0	0/0:38:1.00001:3,3:3-3,3-3:21,13,0,4:3,21:2,4:233.26:326.675,113.385:0.0,0.0:0.0,1.12939e-06,1.0
-chr1	8332124	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8332161;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:44:0.725266:25,26:24-27,25-27:4,20,0,18:25,2|26,2:5,1|7,1|8,1|9,1|10,1|14,1|15,2|18,2|19,1|20,2|23,2|24,1|25,2:345.674:366.612,131.36:0.986131,0.685675:0.0,0.0,1.0	0/1:52:0.317539:19,24:19-19,19-25:16,20,0,16:18,2|19,14:4,1|6,2|8,1|9,1|11,2|12,1|14,3|15,1|17,1|18,1|19,1|24,1:396.996:326.675,113.385:0.0,2.71258:4.67477e-25,7.44892e-06,0.999994
-chr1	8333431	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	END=8333470;RU=tttgt;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:58:0.999958:7,7:7-7,7-7:17,27,0,14:7,17:2,1|3,5|4,2|5,1|6,5:417.359:366.612,131.36:0.0,0.0:0.999986,1.70365e-05,4.73916e-37	0/0:42:0.999865:8,8:8-9,8-9:16,15,0,10:8,16:3,2|4,3|6,2|7,3:282.05:326.675,113.385:0.382696,0.382696:0.0,7.31916e-05,0.999926
-chr1	8334958	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=8334981;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.0:5,5:5-5,5-5:25,14,0,5:5,25:3,4|4,1:264.435:366.612,131.36:0.0,0.0:1.0,2.64791e-07,0.0	0/0:34:0.571229:6,6:5-6,5-6:20,6,0,8:5,3|6,17:3,2|4,2|5,4:204.081:326.675,113.385:0.469019,0.469019:1.44932e-37,0.428869,0.571225
-chr1	8338614	.	ATAAATAAATAAATAAATAA	ATAAATAAATAAATAA	.	.	END=8338633;RU=ataa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.00001:4,4:4-4,4-4:21,15,0,3:4,21:2,2|3,1:246.6:366.612,131.36:0.0,0.0:1.0,2.3266e-06,0.0	0/0:32:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:2,1|3,2|4,1:178.83:326.675,113.385:0.0,0.0:0.0,2.26863e-06,1.0
-chr1	8338698	.	AATAATAATAAT	.	.	.	END=8338709;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:31,5,0,0:4,31:NULL:170.937:366.612,131.36:0.0,0.0:0.0,3.20903e-09,1.0	0/0:24:0.999899:4,4:4-4,4-4:17,7,0,0:4,17:NULL:129.851:326.675,113.385:0.0,0.0:0.0,7.15077e-05,0.999932
-chr1	8339191	.	CTGTGCTGTGCTGTG	.	.	.	END=8339205;RU=ctgtg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:36,21,0,2:3,36:2,2:353.993:366.612,131.36:0.0,0.0:0.0,4.50307e-11,1.0	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.963:326.675,113.385:0.0,0.0:0.0,6.85317e-06,0.999994
-chr1	8339827	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8339862;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.841567:13,13:11-13,11-13:6,3,0,4:13,6:4,1|10,1|11,1|12,1:87.0629:366.612,131.36:0.739465,0.739465:1.0,0.0,0.0	0/0:28:0.980216:18,18:14-19,14-19:10,6,0,8:18,10:6,2|7,1|9,2|12,2|17,1:159.194:326.675,113.385:1.50632,1.50632:4.74857e-16,0.00819059,0.99183
-chr1	8339980	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8340019;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:9:0.168409:22,22:19-22,19-22:2,6,0,0:22,2:NULL:68.9241:366.612,131.36:0.724736,0.724736:9.0371e-05,0.253796,0.746121	1/0:13:0.601332:19,20:19-21,20-21:5,5,0,2:19,2|20,3:4,1|11,1:85.3542:326.675,113.385:0.753387,0.40582:0.0111203,0.695401,0.293511
-chr1	8345278	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=8345305;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.99932:10,10:10-10,10-10:14,18,0,7:10,14:3,2|5,1|6,1|7,2|8,1:276.122:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:42:1.0:7,7:6-7,6-7:23,10,0,6:7,23:4,1|5,1|6,4:239.707:326.675,113.385:0.29703,0.29703:0.0,4.11408e-07,1.0
-chr1	8353434	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=8353449;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.997514:5,5:5-5,5-5:12,10,0,0:5,12:NULL:140.318:366.612,131.36:0.0,0.0:0.0,0.00119794,0.998807	0/0:26:0.999895:4,4:4-4,4-4:17,9,0,0:4,17:NULL:151.271:326.675,113.385:0.0,0.0:9.70261e-38,8.64309e-05,0.999917
-chr1	8354049	.	AAGCAAGCAAGC	.	.	.	END=8354060;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999679:3,3:3-3,3-3:15,16,0,0:3,15:NULL:195.511:366.612,131.36:0.0,0.0:0.0,0.000194791,0.999805	0/0:13:0.945666:3,3:3-3,3-3:7,4,0,2:3,7:2,2:78.2415:326.675,113.385:0.0,0.0:2.55084e-23,0.0192365,0.980801
-chr1	8357311	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8357328;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.979753:9,9:8-9,8-9:19,16,0,0:8,2|9,17:NULL:234.28:366.612,131.36:0.390807,0.390807:8.54647e-27,0.0202936,0.979746	0/0:43:1.0:9,9:9-9,9-9:26,12,0,4:9,26:6,1|7,1|8,2:242.065:326.675,113.385:0.0,0.0:0.0,6.70531e-08,1.0
-chr1	8366194	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8366227;RU=ct;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.236521:26,26:23-26,23-26:2,18,0,13:26,2:5,3|11,1|13,1|17,2|18,2|22,3|23,1:278.578:366.612,131.36:1.449,1.449:0.0,0.0,1.0	0/0:43:0.763277:17,17:16-17,16-17:21,12,0,8:16,6|17,15:4,1|9,2|11,1|12,1|13,1|14,1|16,1:277.096:326.675,113.385:0.696878,0.696878:3.64364e-12,0.236711,0.763312
-chr1	8366995	.	ATATATATATATATATATATATATATATATATAT	ATATATATATATATATAT	.	.	END=8367028;RU=at;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0306099:9,9:9-14,9-14:0,11,0,2:NULL:4,1|9,1:114.917:366.612,131.36:1.76671,1.76671:0.881275,0.115555,0.00327874	0/0:8:0.729332:17,17:17-17,17-17:6,2,0,0:17,6:NULL:46.4011:326.675,113.385:0.0,0.0:1.36574e-06,0.105537,0.894565
-chr1	8371543	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=8371606;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:13:0.926383:16,17:16-17,16-17:5,6,0,2:16,2|17,3:10,1|15,1:99.6572:366.612,131.36:0.429525,0.290354:4.86265e-08,0.0197682,0.980273	0/0:21:0.685203:16,16:16-16,16-16:5,8,0,8:16,5:5,2|7,1|10,1|11,2|12,1|14,1:155.276:326.675,113.385:0.19802,0.19802:1.05189e-07,0.206014,0.794033
-chr1	8374412	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=8374432;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:7,7:7-7,7-7:19,12,0,5:7,19:4,2|5,2|6,1:221.878:366.612,131.36:0.0,0.0:0.0,8.39317e-06,0.999994	0/0:33:0.999219:7,7:7-7,7-7:13,14,0,6:7,13:3,1|4,2|6,3:226.934:326.675,113.385:0.0,0.0:4.64972e-32,0.000408752,0.999592
-chr1	8374431	.	TGATGATGATGATGATGA	.	.	.	END=8374448;RU=tga;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:6,6:6-6,6-6:21,13,0,4:6,21:3,1|4,2|5,1:227.019:366.612,131.36:0.0,0.0:0.0,1.39271e-06,1.0	0/0:34:0.999992:6,6:6-6,6-6:18,11,0,5:6,18:3,1|4,3|5,1:213.13:326.675,113.385:0.0,0.0:0.0,1.50354e-05,0.999986
-chr1	8378065	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	.	END=8378114;RU=tcttt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.753591:10,10:10-10,10-10:5,9,0,5:10,5:3,1|4,1|7,2|9,1:143.055:366.612,131.36:0.139319,0.139319:3.18022e-16,0.130091,0.870006	0/0:22:0.902909:10,10:9-10,9-10:7,8,0,6:10,7:2,1|3,1|5,1|6,1|7,1|8,1:149.552:326.675,113.385:0.607117,0.607117:1.93876e-22,0.0627019,0.937389
-chr1	8383454	.	TAATTAATTAATTAAT	TAATTAATTAAT	.	.	END=8383469;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.700614:3,4:3-4,4-4:17,13,0,0:3,2|4,15:NULL:198.121:366.612,131.36:0.499975,0.0:1.21728e-38,0.700637,0.29937	0/0:24:0.999182:4,4:4-4,4-4:14,10,0,0:4,14:NULL:152.232:326.675,113.385:0.0,0.0:1.50491e-40,0.000573469,0.999431
-chr1	8384813	.	TGTGTGTGTGTG	.	.	.	END=8384824;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.998269:6,6:5-6,5-6:26,17,0,2:5,3|6,23:5,2:287.022:366.612,131.36:0.311527,0.311527:0.0,0.00173601,0.998269	0/0:44:1.0:6,6:6-6,6-6:26,17,0,0:6,26:NULL:264.41:326.675,113.385:0.139319,0.139319:0.0,1.56232e-07,1.0
-chr1	8389556	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=8389603;RU=tatc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:59:0.571161:11,12:11-11,11-12:15,26,0,18:11,15:3,2|4,2|5,3|6,1|7,4|8,1|10,2|11,2|12,1:446.744:366.612,131.36:0.0,0.48221:0.00027855,0.999721,9.60695e-16	0/0:41:0.966978:12,12:11-12,11-12:8,19,0,13:12,8:3,3|5,2|8,3|10,2|11,3:308.233:326.675,113.385:0.419363,0.419363:6.27891e-11,0.0183287,0.981709
-chr1	8389896	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	.	END=8389935;RU=atct;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.981228:10,10:10-10,10-10:9,20,0,14:10,9:2,2|3,1|4,3|5,2|6,2|8,2|9,2:327.676:366.612,131.36:0.19802,0.19802:4.86114e-22,0.01021,0.989813	0/0:51:0.999886:10,10:10-10,10-10:16,22,0,13:10,16:4,3|5,1|6,2|7,2|8,2|9,3:363.177:326.675,113.385:0.0,0.0:4.44127e-38,8.00208e-05,0.999924
-chr1	8389961	.	TTTGTTTGTTTG	.	.	.	END=8389972;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:218.76:366.612,131.36:0.0,0.0:0.0,2.83242e-06,1.0	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:348.37:326.675,113.385:0.0,0.0:0.0,3.40439e-08,1.0
-chr1	8409196	.	AAAAACAAAAACAAAAAC	.	.	.	END=8409213;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.783:366.612,131.36:0.0,0.0:0.0,4.60431e-08,1.0	0/0:14:0.983591:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.7495:326.675,113.385:0.0,0.0:3.68951e-30,0.00828025,0.991741
-chr1	8410948	.	CGCTCGCTCGCT	.	.	.	END=8410959;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99408:3,3:3-3,3-3:11,15,0,0:3,11:NULL:183.329:366.612,131.36:0.0,0.0:2.54557e-38,0.00344241,0.996565	0/0:64:1.0:3,3:3-3,3-3:39,19,0,6:3,39:2,6:366.886:326.675,113.385:0.0,0.0:0.0,6.181e-12,1.0
-chr1	8413506	.	TTATTTATTTAT	.	.	.	END=8413517;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:176.382:366.612,131.36:0.0,0.0:0.0,3.84885e-07,1.0	0/0:22:0.999463:3,3:3-3,3-3:14,8,0,0:3,14:NULL:128.065:326.675,113.385:0.0,0.0:0.0,0.000323489,0.999681
-chr1	8415286	.	AAACAAACAAACAAACAAAC	.	.	.	END=8415305;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999777:5,5:5-5,5-5:15,21,0,6:5,15:2,1|3,2|4,3:303.295:366.612,131.36:0.0,0.0:0.0,9.65488e-05,0.999903	0/0:43:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:2,1|3,5|4,1:263.434:326.675,113.385:0.0,0.0:0.0,8.23304e-07,1.0
-chr1	8418293	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=8418328;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:8,8:8-8,8-8:19,22,0,9:8,19:3,1|4,3|5,4|7,1:347.812:366.612,131.36:0.139319,0.139319:0.999995,4.34615e-06,1.75392e-34	0/0:44:1.0:9,9:9-9,9-9:24,13,0,6:9,24:3,1|4,1|6,1|7,1|8,2:265.715:326.675,113.385:0.0,0.0:0.0,3.37734e-07,1.0
-chr1	8419081	.	AAATAAATAAAT	.	.	.	END=8419092;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:220.143:366.612,131.36:0.0,0.0:0.0,4.41593e-06,0.999995	0/0:30:0.999885:3,3:2-3,2-3:16,13,0,0:3,16:NULL:178.943:326.675,113.385:0.419363,0.419363:0.0,7.18237e-05,0.999932
-chr1	8420846	.	AAATAAATAAAT	.	.	.	END=8420857;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.937:366.612,131.36:0.0,0.0:0.0,3.35584e-06,1.0	0/0:28:0.999923:3,3:3-3,3-3:17,11,0,0:3,17:NULL:163.458:326.675,113.385:0.0,0.0:0.0,4.61361e-05,0.999956
-chr1	8423083	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8423108;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.172272:21,21:18-22,18-22:2,4,0,2:21,2:11,1|14,1:60.6674:366.612,131.36:0.881911,0.881911:0.0,0.0,1.0	0/0:20:0.596815:13,13:11-14,11-14:14,6,0,0:11,2|12,2|13,8|14,2:NULL:135.215:326.675,113.385:0.827074,0.827074:9.63291e-06,0.326822,0.673181
-chr1	8424107	.	CCAGCCAGCCAG	.	.	.	END=8424118;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:211.855:366.612,131.36:0.0,0.0:0.0,2.95663e-07,1.0	0/0:27:1.00001:3,3:3-3,3-3:22,5,0,0:3,22:NULL:132.923:326.675,113.385:0.0,0.0:0.0,9.49426e-07,1.0
-chr1	8433296	.	TATTTATTTATT	.	.	.	END=8433307;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:177.46:366.612,131.36:0.0,0.0:0.0,5.30392e-08,1.0	0/0:10:0.980539:3,3:3-3,3-3:9,1,0,0:3,9:NULL:45.09:326.675,113.385:0.0,0.0:1.04721e-29,0.00803098,0.991988
-chr1	8433511	.	TATATATATATATATATATA	TATATATATATATATATA,TATATATATATATATATATATA	.	.	END=8433530;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.973682:9,9:8-9,8-9:19,22,0,0:8,3|9,16:NULL:292.357:366.612,131.36:0.438559,0.438559:0.999979,2.24515e-05,6.28827e-20	2/2:10:0.143587:11,11:8-11,8-11:2,5,0,0:11,2:NULL:53.8357:326.675,113.385:0.842923,0.842923:0.000431743,0.502089,0.497491
-chr1	8433926	.	TATATATATATA	.	.	.	END=8433937;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999997:6,6:6-7,6-7:19,12,0,0:6,19:NULL:189.643:366.612,131.36:0.169767,0.169767:1.64088e-30,1.25063e-05,0.999987	0/0:22:0.999781:6,6:6-6,6-6:16,5,0,0:6,16:NULL:109.602:326.675,113.385:0.139319,0.139319:9.12765e-26,0.000111527,0.999888
-chr1	8456266	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8456293;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.155711:16,16:16-27,16-27:2,4,0,0:16,2:NULL:47.4802:366.612,131.36:5.3798,5.3798:6.48768e-08,0.0609947,0.939094	0/0:29:0.99989:14,14:11-14,11-14:17,4,0,7:14,17:4,1|5,1|8,1|9,1|10,2|13,1:166.18:326.675,113.385:1.00465,1.00465:4.58367e-29,4.43602e-05,0.999956
-chr1	8470720	.	TCTCTCTCTCTCTC	.	.	.	END=8470733;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.16141:7,7:7-24,7-24:22,13,0,2:7,22:5,1|21,1:239.062:366.612,131.36:8.06485,8.06485:0.0,2.46782e-07,1.0	0/0:34:0.999993:7,7:7-7,7-7:19,15,0,0:7,19:NULL:221.843:326.675,113.385:0.0,0.0:8.84e-43,1.81607e-05,0.999985
-chr1	8470767	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8470826;RU=ct;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.892976:22,22:22-22,22-22:8,12,0,5:22,8:6,1|18,1|19,1|21,2:184.724:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/2:21:0.0222805:26,26:25-29,25-29:0,11,0,8:NULL:6,3|7,1|11,1|15,1|16,1|17,1:174.168:326.675,113.385:1.64368,1.64368:0.722255,0.257109,0.0206627
-chr1	8470857	.	CTCTCTCTCTCTCTCT	.	.	.	END=8470872;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999933:8,8:8-8,8-8:18,18,0,0:8,18:NULL:233.544:366.612,131.36:0.0990099,0.0990099:3.36816e-33,4.64844e-05,0.999956	0/0:27:0.868555:8,8:8-8,8-8:6,18,0,3:8,6:6,3:216.942:326.675,113.385:0.0,0.0:1.3158e-11,0.0731223,0.926973
-chr1	8477191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8477250;RU=ga;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:19:0.0277315:32,32:31-34,31-34:0,9,0,7:NULL:7,1|11,1|14,1|18,1|26,1|31,1|32,1:140.727:366.612,131.36:1.27412,1.27412:2.35232e-16,0.152828,0.84725	1/0:19:0.513868:29,30:23-30,23-30:4,9,0,5:29,2|30,2:7,1|12,1|15,1|18,1|19,1:147.648:326.675,113.385:1.81115,1.95434:0.0172261,0.766209,0.216644
-chr1	8480096	.	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	.	.	END=8480191;RU=agaaagga;PERIOD=8;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:24:0.998877:7,12:4-9,11-12:6,8,0,6:7,2|12,4:3,2|6,1|8,2|10,1:150.18:366.612,131.36:1.54513,0.456091:4.45744e-11,1.0,6.69644e-08	1/3:35:0.364967:6,10:6-11,9-11:4,11,0,18:6,4:2,1|3,2|4,1|5,2|6,3|7,1|8,1|9,5|10,2:242.488:326.675,113.385:0.899956,0.56427:0.61593,0.38413,1.79851e-19
-chr1	8496447	.	TCTCTCTCTCTC	TCTCTCTCTCTCTC	.	.	END=8496458;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.998725:7,7:5-7,5-7:14,14,0,0:7,14:NULL:191.968:366.612,131.36:0.863148,0.863148:0.0,0.000871573,0.999134	0/0:28:1.00001:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.068:326.675,113.385:0.0,0.0:7e-45,3.71249e-06,1.0
-chr1	8498887	.	TGTGTGTGTGTG	.	.	.	END=8498898;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:6,6:6-6,6-6:22,19,0,5:6,22:4,1|5,4:293.567:366.612,131.36:0.0,0.0:0.0,5.43531e-07,1.0	0/0:23:0.999971:6,6:6-6,6-6:18,5,0,0:6,18:NULL:113.239:326.675,113.385:0.0,0.0:8.34546e-39,2.40389e-05,0.999979
-chr1	8500395	.	AGGAAGGAAGGA	.	.	.	END=8500406;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.263:366.612,131.36:0.0,0.0:0.0,6.90293e-07,1.0	0/0:27:0.999531:3,3:3-3,3-3:14,11,0,2:3,14:2,2:170.995:326.675,113.385:0.0,0.0:0.0,0.000248712,0.999751
-chr1	8503531	.	TAAATAAATAAA	.	.	.	END=8503542;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999993:3,3:3-3,3-3:19,16,0,0:3,19:NULL:221.348:366.612,131.36:0.0,0.0:0.0,1.39744e-05,0.999987	0/0:26:0.998985:3,3:3-3,3-3:13,9,0,4:3,13:2,4:161.383:326.675,113.385:0.0,0.0:1.3e-43,0.000375542,0.999628
-chr1	8504809	.	TTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=8504823;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:0.999994:7,7:4-7,4-7:19,26,0,6:7,19:3,2|4,1|5,2|6,1:356.642:366.612,131.36:0.896026,0.896026:0.0,1.83484e-06,1.0	0/0:37:1.00001:5,5:5-5,5-5:23,8,0,6:5,23:3,1|4,5:210.727:326.675,113.385:0.0,0.0:0.0,2.7635e-07,1.0
-chr1	8528507	.	TTGTTGTTGTTG	.	.	.	END=8528518;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:22,13,0,0:4,22:NULL:203.703:366.612,131.36:0.0,0.0:0.0,9.52647e-07,1.0	0/0:26:0.999939:4,4:4-4,4-4:17,7,0,2:4,17:3,2:151.591:326.675,113.385:0.0,0.0:0.0,3.18312e-05,0.999971
-chr1	8529981	.	AACCAACCAACCAACC	AACCAACCAACC	.	.	END=8529996;RU=aacc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:40:1.0:3,4:3-3,4-4:27,11,0,2:3,10|4,17:2,1|3,1:240.874:366.612,131.36:0.0,0.0:0.0,1.0,4.47201e-20	0/0:24:0.985496:4,4:4-4,4-4:10,14,0,0:4,10:NULL:167.18:326.675,113.385:0.0,0.0:3.47962e-34,0.0120016,0.988025
-chr1	8536034	.	AAAACAAAACAAAAC	.	.	.	END=8536048;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.476:366.612,131.36:0.0,0.0:0.0,1.08851e-05,0.999993	0/0:38:1.00001:3,3:3-3,3-3:23,15,0,0:3,23:NULL:233.041:326.675,113.385:0.0,0.0:0.0,2.21728e-06,1.0
-chr1	8536113	.	CAACAACAACAACAACAACAACAACAA	CAACAACAACAACAACAA	.	.	END=8536139;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.495472:6,6:3-9,3-9:4,14,0,0:6,4:NULL:145.49:366.612,131.36:1.9144,1.9144:0.918823,0.0812714,3.42406e-12	0/0:34:0.999281:9,9:9-9,9-9:14,16,0,4:9,14:4,1|5,1|8,2:234.098:326.675,113.385:0.0,0.0:2.68761e-26,0.000352468,0.999651
-chr1	8536661	.	ACAACAACAACA	.	.	.	END=8536672;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:168.447:366.612,131.36:0.0,0.0:0.0,3.16091e-06,1.0	0/0:27:0.999897:4,4:4-4,4-4:16,8,0,3:4,16:3,3:158.328:326.675,113.385:0.0,0.0:0.0,3.98677e-05,0.999963
-chr1	8536682	.	CAAACAAACAAA	.	.	.	END=8536693;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999998:3,3:3-3,3-3:19,10,0,2:3,19:2,2:179.592:366.612,131.36:0.0,0.0:0.0,1.04607e-05,0.999993	0/0:24:0.999723:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.967:326.675,113.385:0.0,0.0:0.0,0.000151341,0.99985
-chr1	8537537	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=8537556;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.99989:4,4:3-4,3-4:16,7,0,4:4,16:2,1|3,3:155.271:366.612,131.36:0.40582,0.40582:0.0,4.45846e-05,0.999956	0/0:20:0.991856:4,4:4-4,4-4:10,8,0,2:4,10:3,2:128.224:326.675,113.385:0.0,0.0:6.05885e-31,0.00459612,0.995416
-chr1	8543734	.	AAATAAATAAAT	.	.	.	END=8543745;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:200.084:366.612,131.36:0.0,0.0:0.0,8.25062e-08,1.0	0/0:16:0.997637:3,3:3-3,3-3:12,4,0,0:3,12:NULL:81.7413:326.675,113.385:0.0,0.0:2.84343e-35,0.00106447,0.998938
-chr1	8554881	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=8554988;RU=agaggc;PERIOD=6;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:31:0.298195:6,21:5-13,13-21:2,6,0,21:6,2:2,2|3,2|4,3|5,1|6,1|7,1|8,3|9,1|10,2|12,1|16,2|18,1|19,1:216.764:366.612,131.36:3.12548,1.90866:4.36146e-16,1.0,3.07779e-23	2/0:51:0.994923:13,18:4-13,17-18:5,18,0,25:13,3|17,2:3,2|4,2|5,1|7,5|8,4|9,2|10,1|12,1|13,2|14,1|15,2|16,1|18,1:373.705:326.675,113.385:2.97959,0.547696:1.91093e-05,0.999985,2.24371e-15
-chr1	8557824	.	ACACACACACACAC	ACACACACACAC	.	.	END=8557837;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.994354:6,6:6-7,6-7:12,10,0,0:6,12:NULL:136.46:366.612,131.36:0.412766,0.412766:0.997344,0.00266321,3.95322e-22	0/0:35:1.00001:7,7:7-7,7-7:21,11,0,2:7,21:4,1|6,1:197.338:326.675,113.385:0.139319,0.139319:1.6042e-41,2.70255e-06,1.0
-chr1	8567230	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTA	.	.	END=8567268;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.97243:11,11:11-11,11-11:9,8,0,0:11,9:NULL:111.207:366.612,131.36:0.0,0.0:0.993655,0.00635861,1.57671e-20	0/0:14:0.809962:13,13:13-13,13-13:6,6,0,2:13,6:3,1|9,1:98.1398:326.675,113.385:0.0,0.0:1.63673e-10,0.119958,0.880145
-chr1	8574197	.	CACACACACACA	.	.	.	END=8574208;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:6,6:6-6,6-6:21,17,0,0:6,21:NULL:234.116:366.612,131.36:0.0,0.0:1e-45,4.21085e-06,0.999995	0/0:36:1.0:6,6:6-6,6-6:25,9,0,2:6,25:4,2:198.818:326.675,113.385:0.0,0.0:0.0,2.05172e-07,1.0
-chr1	8575616	.	TGGTGGTGGTGGTGGTGG	.	.	.	END=8575633;RU=tgg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999936:6,6:6-6,6-6:17,16,0,2:6,17:5,2:234.43:366.612,131.36:0.0,0.0:2.7e-44,3.00017e-05,0.999971	0/0:28:0.999978:6,6:6-6,6-6:18,8,0,2:6,18:4,1|5,1:159.315:326.675,113.385:0.0,0.0:0.0,1.73442e-05,0.999986
-chr1	8580889	.	GTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT	.	.	END=8580912;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.989305:10,10:9-10,9-10:17,21,0,4:9,2|10,15:5,2|7,1|9,1:302.27:366.612,131.36:0.298675,0.298675:0.999971,3.22529e-05,3.67174e-31	0/0:40:0.999625:12,12:12-13,12-13:24,10,0,5:12,22|13,2:5,3|11,2:236.795:326.675,113.385:0.284901,0.284901:6.62828e-34,5.70766e-07,1.0
-chr1	8584648	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8584699;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0306459:11,11:11-14,11-14:0,8,0,0:NULL:NULL:72.4529:366.612,131.36:0.952864,0.952864:1.0,0.0,0.0	0/0:9:0.24064:26,26:23-26,23-26:2,2,0,5:26,2:5,1|8,1|9,1|14,1|18,1:66.5773:326.675,113.385:0.772658,0.772658:0.000298698,0.390389,0.609378
-chr1	8584700	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATAT,ATATATATATATATATATATATATATATATATATATAT	.	.	END=8584747;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:10:0.0316378:19,19:17-20,17-20:0,9,0,0:NULL:NULL:82.3892:366.612,131.36:1.15795,1.15795:1.0,0.0,0.0	1/1:1:0.000252147:6,6:6-6,6-6:0,1,0,0:NULL:NULL:8.42831:326.675,113.385:0.0,0.0:0.107513,0.489833,0.402853
-chr1	8585797	.	TATTTATTTATTTATT	.	.	.	END=8585812;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.991404:4,4:4-4,4-4:11,15,0,0:4,11:NULL:180.622:366.612,131.36:0.0,0.0:6.17043e-36,0.00623376,0.993782	0/0:24:0.998301:4,4:4-4,4-4:13,11,0,0:4,13:NULL:151.104:326.675,113.385:0.0,0.0:9.11e-43,0.00118285,0.998823
-chr1	8586014	.	TTTATTTATTTA	.	.	.	END=8586025;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.996092:3,3:3-3,3-3:12,11,0,0:3,12:NULL:150.001:366.612,131.36:0.0,0.0:5.02997e-39,0.00182207,0.998185	0/0:22:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.173:326.675,113.385:0.0,0.0:0.0,7.8491e-05,0.999925
-chr1	8594736	.	TGTGTGTGTGTGTG	.	.	.	END=8594749;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.99945:7,7:7-7,7-7:14,18,0,2:7,14:6,2:240.607:366.612,131.36:0.0,0.0:1.37954e-27,0.000272071,0.999728	0/0:29:0.99987:7,7:7-7,7-7:16,8,0,5:7,16:4,1|5,2|6,2:178.756:326.675,113.385:0.0,0.0:7.19342e-32,4.09985e-05,0.999963
-chr1	8596349	.	TGTGTGTGTGTG	.	.	.	END=8596360;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.986206:6,6:6-6,6-6:10,8,0,0:6,10:NULL:106.886:366.612,131.36:0.0,0.0:6.00194e-24,0.00732323,0.992693	0/0:20:0.986306:6,6:6-6,6-6:10,10,0,0:6,10:NULL:133.658:326.675,113.385:0.0,0.0:4.46305e-24,0.00791973,0.9921
-chr1	8597826	.	CACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=8597851;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.818865:15,15:15-15,15-15:6,3,0,0:15,6:NULL:51.6084:366.612,131.36:0.0,0.0:7.6657e-20,0.0258792,0.97417	0/0:11:0.40379:13,13:13-14,13-14:3,3,0,4:13,3:5,1|11,1|12,2:69.6071:326.675,113.385:0.518267,0.518267:6.64642e-05,0.161811,0.838196
-chr1	8614957	.	AAACAAACAAACAAACAAAC	.	.	.	END=8614976;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:27,13,0,3:5,27:3,3:252.777:366.612,131.36:0.0,0.0:0.0,9.01005e-08,1.0	0/0:23:0.995445:5,5:5-5,5-5:11,10,0,2:5,11:4,2:149.524:326.675,113.385:0.0,0.0:6.34409e-38,0.00224629,0.997761
-chr1	8619173	.	GTTGTTGTTGTTGTT	GTTGTTGTTGTT,GTTGTTGTTGTTGTTGTT	.	.	END=8619187;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0910916:4,6:4-7,4-7:0,15,0,4:NULL:3,1|4,3:169.146:366.612,131.36:1.17826,1.11561:0.0425979,0.336559,0.620952	0/0:20:0.997823:5,5:5-5,5-5:12,6,0,2:5,12:4,2:118.793:326.675,113.385:0.0,0.0:3.09658e-36,0.000974604,0.999028
-chr1	8628070	.	TTTGTTTGTTTG	TTTG	.	.	END=8628081;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0968113:1,1:1-2,1-2:0,20,0,0:NULL:NULL:185.299:366.612,131.36:0.506017,0.506017:0.302128,0.512574,0.185307	0/0:18:0.996572:3,3:3-3,3-3:11,5,0,2:3,11:2,2:106.536:326.675,113.385:0.0,0.0:2.83415e-36,0.00109878,0.998906
-chr1	8628100	.	TTGTTTTGTTTTGTT	.	.	.	END=8628114;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999919:3,3:3-3,3-3:17,23,0,0:3,17:NULL:278.982:366.612,131.36:0.0,0.0:0.0,7.79595e-05,0.999925	0/0:21:0.999719:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.395:326.675,113.385:0.0,0.0:0.0,0.000150872,0.99985
-chr1	8628129	.	TTTATTTTTATTTTTATT	.	.	.	END=8628146;RU=tttatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999891:3,3:3-3,3-3:16,18,0,2:3,16:2,2:247.617:366.612,131.36:0.0,0.0:0.0,7.63338e-05,0.999925	0/0:19:0.999864:3,3:3-3,3-3:16,3,0,0:3,16:NULL:95.0823:326.675,113.385:0.0,0.0:0.0,7.19751e-05,0.999932
-chr1	8631314	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC	.	.	END=8631341;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.988226:14,14:13-14,13-14:18,5,0,2:13,3|14,15:7,1|11,1:144.884:326.675,113.385:0.236383,0.236383:1.25388e-15,0.0117186,0.988308
-chr1	8631352	.	TGTGTGTGTGTGTGTGTGTGTG	TG	.	.	END=8631373;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:22:0.679657:11,11:10-12,10-12:14,5,0,3:10,2|11,10|12,2:5,1|10,2:139.777:326.675,113.385:0.653165,0.653165:1.8551e-16,0.0629716,0.937121
-chr1	8631769	.	TTTTGTTTTGTTTTG	TTTTG	.	.	END=8631783;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:23:0.998185:3,3:3-3,3-3:12,9,0,2:3,12:2,2:143.831:326.675,113.385:0.0,0.0:2.94001e-37,0.000914917,0.999089
-chr1	8631787	.	GTTTGTTTGTTT	GTTT	.	.	END=8631798;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:172.164:326.675,113.385:0.0,0.0:0.0,1.10055e-05,0.999993
-chr1	8632668	.	CCCACCCACCCA	CCCACCCACCCACCCACCCA	.	.	END=8632679;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.996957:5,5:5-5,5-5:12,0,0,0:5,12:NULL:48.0199:366.612,131.36:0.0,0.0:1.27465e-30,0.000505948,0.999499	0/1:36:1.0:3,5:3-3,5-5:31,5,0,0:3,18|5,13:NULL:191.55:326.675,113.385:0.0,0.0:0.0,1.0066e-26,1.0
-chr1	8633725	.	ATAAATAAATAA	ATAA	.	.	END=8633736;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:24:0.999912:3,3:3-3,3-3:17,7,0,0:3,17:NULL:135.44:326.675,113.385:0.0,0.0:0.0,5.65693e-05,0.999947
-chr1	8633735	.	AACAACAACAAC	AAC	.	.	END=8633746;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.999715:4,4:4-4,4-4:16,10,0,0:4,16:NULL:157.321:326.675,113.385:0.0,0.0:1e-45,0.000207364,0.999796
-chr1	8635079	.	ACCCACCCACCC	.	.	.	END=8635090;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.436831:3,3:3-3,3-3:3,1,0,0:3,3:NULL:19.9896:366.612,131.36:0.0990099,0.0990099:1.20682e-08,0.229503,0.77053	0/0:11:0.808579:3,3:3-3,3-3:5,6,0,0:3,5:NULL:73.0765:326.675,113.385:0.0,0.0:7.69984e-14,0.0907137,0.909384
-chr1	8641425	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8641448;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997989:12,12:12-12,12-12:12,11,0,5:12,12:5,1|6,2|11,2:194.886:366.612,131.36:0.0,0.0:2.21356e-21,0.000836114,0.999166	0/0:17:0.998552:12,12:12-12,12-12:13,2,0,2:12,13:6,1|11,1:88.402:326.675,113.385:0.0,0.0:6.60585e-23,0.000666587,0.999339
-chr1	8642579	.	AAATAAATAAAT	.	.	.	END=8642590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.00001:3,3:3-4,3-4:19,29,0,4:3,19:2,4:367.151:366.612,131.36:0.253975,0.253975:0.0,6.69503e-06,0.999994	0/0:28:0.999431:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.869:326.675,113.385:0.0,0.0:1.361e-41,0.00026199,0.999742
-chr1	8642988	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8643027;RU=tc;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.321181:15,19:15-15,15-22:8,12,0,4:15,8:7,1|8,1|10,1|19,1:188.563:366.612,131.36:0.0,2.24742:0.321103,0.678909,4.43521e-22	0/0:27:0.41447:20,20:19-20,19-20:8,11,0,8:19,3|20,5:6,1|8,1|11,1|13,1|14,1|16,1|18,1|19,1:206.384:326.675,113.385:0.484441,0.484441:3.2159e-05,0.557393,0.442685
-chr1	8643034	.	TCTATCTATCTA	TCTATCTA	.	.	END=8643045;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.0739848:2,2:1-3,1-3:0,16,0,0:NULL:NULL:151.244:366.612,131.36:0.765136,0.765136:0.269062,0.506557,0.224385	0/0:27:0.999628:3,3:2-3,2-3:15,11,0,0:3,15:NULL:161.037:326.675,113.385:0.323567,0.323567:7.78753e-29,0.000218365,0.999782
-chr1	8643653	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTT	.	.	END=8643682;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0460221:4,4:2-5,2-5:0,17,0,2:NULL:4,2:163.884:366.612,131.36:1.01097,1.01097:0.386743,0.490343,0.123007	0/0:34:0.999927:6,6:6-6,6-6:17,11,0,5:6,17:3,3|4,1|5,1:207.421:326.675,113.385:0.139319,0.139319:1e-45,5.03197e-05,0.999949
-chr1	8643693	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8643718;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:25:0.32159:14,17:12-14,12-18:2,15,0,6:14,2:5,1|6,1|11,1|13,1|14,1|17,1:192.189:366.612,131.36:0.680941,1.99696:6.49809e-26,0.000350704,0.999652	0/2:38:0.456917:13,15:13-13,13-15:19,12,0,6:12,2|13,17:5,1|6,1|8,1|10,1|12,1|15,1:257.188:326.675,113.385:0.0,1.01474:4.28029e-29,3.84308e-06,1.0
-chr1	8646828	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATT	.	.	END=8646863;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.99891:7,7:7-7,7-7:13,18,0,2:7,13:4,1|6,1:234.583:366.612,131.36:0.0,0.0:0.999819,0.000181101,1.7486e-33	0/0:25:0.998611:9,9:4-9,4-9:13,6,0,4:9,13:6,1|7,2|8,1:137.185:326.675,113.385:2.04948,2.04948:8.80789e-28,0.000791479,0.999211
-chr1	8650375	.	ACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=8650398;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.996598:16,16:16-18,16-18:16,11,0,6:15,2|16,14:6,1|7,1|9,1|15,3:222.279:366.612,131.36:0.581383,0.581383:0.0,0.0,1.0	0/0:24:0.984644:12,12:11-12,11-12:17,3,0,4:11,3|12,14:8,1|11,3:137.599:326.675,113.385:0.270063,0.270063:5.28161e-17,0.0152271,0.984803
-chr1	8650639	.	ATATATATATATATATATATATATATATATATATATATAT	AT,ATATATATATATATATATATATATATATATAT	.	.	END=8650678;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00128449:1,1:1-6,1-6:0,4,0,0:NULL:NULL:35.4749:366.612,131.36:1.92492,1.92492:0.248497,0.563877,0.187649	2/2:4:0.0175477:16,16:16-20,16-20:0,2,0,0:NULL:NULL:17.2343:326.675,113.385:0.900283,0.900283:0.271692,0.499525,0.228792
-chr1	8650679	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=8650710;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.299029:19,19:17-19,17-19:3,3,0,0:19,3:NULL:41.0175:366.612,131.36:0.813329,0.813329:7.60869e-10,0.18253,0.817535	0/0:8:0.436188:16,16:16-16,16-16:3,3,0,2:16,3:11,1|15,1:54.5607:326.675,113.385:0.19802,0.19802:1.21553e-05,0.246219,0.753781
-chr1	8651209	.	AATAAATAAATA	AATA	.	.	END=8651220;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0982358:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.293:366.612,131.36:0.975134,0.975134:0.238523,0.50738,0.254128	0/0:32:1.0:3,3:3-3,3-3:24,5,0,3:3,24:2,3:160.953:326.675,113.385:0.0,0.0:0.0,1.48101e-07,1.0
-chr1	8651810	.	AAAACAAAAACAAAAACA	.	.	.	END=8651827;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:211.408:366.612,131.36:0.0,0.0:0.0,1.21047e-07,1.0	0/0:18:0.989372:3,3:3-3,3-3:10,8,0,0:3,10:NULL:112.49:326.675,113.385:0.0,0.0:6.9492e-33,0.0064146,0.993602
-chr1	8653498	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	.	END=8653537;RU=aagaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.503954:8,8:5-8,5-8:4,12,0,0:8,4:NULL:126.321:366.612,131.36:0.761926,0.761926:6.16962e-12,0.372315,0.627739	0/0:30:0.998573:8,8:8-8,8-8:13,12,0,5:8,13:3,1|4,1|5,2|7,1:202.014:326.675,113.385:0.0,0.0:4.65052e-38,0.000786841,0.999218
-chr1	8654962	.	CTCTCTCCTCTCTCCTCTCTC	CTCTCTC	.	.	END=8654982;RU=ctctctc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.250215:1,1:1-1,1-1:0,18,0,0:NULL:NULL:160.895:366.612,131.36:0.0990099,0.0990099:0.520212,0.417376,0.0625452	0/0:25:0.99915:3,3:3-3,3-3:14,11,0,0:3,14:NULL:158.356:326.675,113.385:0.0,0.0:5.11259e-39,0.00063414,0.99937
-chr1	8655539	.	TGTATATACAGTTTGTATATACAGTTTGTATATACAGTT	.	.	.	END=8655577;RU=tgtatatacagtt;PERIOD=13;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.991493:3,3:3-3,3-3:11,14,0,0:3,11:NULL:171.34:366.612,131.36:0.0,0.0:6.08752e-14,0.00739242,0.992625	0/0:38:1.0:3,3:3-3,3-3:27,11,0,0:3,27:NULL:220.313:326.675,113.385:0.0,0.0:7.89224e-34,2.1361e-07,1.0
-chr1	8661278	.	TCTGCGCACTGCCTCTCTGCGCACTGCCTCTCTGCGCACTGCCTC	.	.	.	END=8661322;RU=tctgcgcactgcctc;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.735443:3,3:1-3,1-3:5,4,0,0:3,5:NULL:63.5448:366.612,131.36:0.339533,0.339533:1.33779e-06,0.179636,0.820434	0/0:27:0.999987:3,3:3-3,3-3:20,7,0,0:3,20:NULL:149.294:326.675,113.385:0.0,0.0:1.29928e-24,2.25915e-05,0.999979
-chr1	8662879	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8662932;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.559272:24,24:21-24,21-24:4,17,0,14:24,4:5,1|6,1|7,3|9,1|12,2|14,1|17,1|19,1|21,2|22,1:288.885:366.612,131.36:1.34719,1.34719:0.955649,0.044423,3.39378e-08	0/0:30:0.79467:27,27:26-28,26-28:6,9,0,13:27,6:8,1|11,1|13,1|14,1|15,1|16,2|17,1|18,2|22,1|23,1|27,1:210.896:326.675,113.385:0.464609,0.464609:1.75214e-14,0.0702106,0.929885
-chr1	8670288	.	AAATAAATAAAT	.	.	.	END=8670299;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999475:3,3:3-3,3-3:14,13,0,0:3,14:NULL:169.599:366.612,131.36:0.0,0.0:0.0,0.000333998,0.999667	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.846:326.675,113.385:0.0,0.0:0.0,7.53837e-06,0.999994
-chr1	8675250	.	CACACACACACACACACA	CACACACACACA,CACACACACACACA	.	.	END=8675267;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.929463:6,7:6-6,6-10:23,14,0,2:5,2|6,16|7,3|9,2:4,1|7,1:266.324:366.612,131.36:0.0,1.13866:0.929583,0.0705108,5.71458e-32	0/0:29:0.69922:9,9:5-10,5-10:20,9,0,0:5,2|8,2|9,14|10,2:NULL:190.405:326.675,113.385:1.99244,1.99244:2.03531e-21,0.280196,0.719807
-chr1	8675272	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8675305;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.999897:14,14:14-14,14-14:22,16,0,4:13,2|14,20:6,1|7,1|8,1|13,1:274.611:366.612,131.36:0.0,0.0:1.0,7.88526e-07,0.0	0/0:29:0.907371:17,17:15-18,15-18:12,11,0,4:16,2|17,10:4,1|13,1|15,1|16,1:191.535:326.675,113.385:0.615775,0.615775:1.33605e-10,0.0899302,0.910167
-chr1	8675459	.	ACAGAAACACAGAAACACAGAAAC	.	.	.	END=8675482;RU=acagaaac;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999994:3,3:3-3,3-3:20,19,0,0:3,20:NULL:255.512:366.612,131.36:0.0,0.0:0.0,1.85232e-05,0.999985	0/0:25:0.999268:3,3:3-3,3-3:13,10,0,2:3,13:2,2:159.691:326.675,113.385:0.0,0.0:9.36e-43,0.000455439,0.999546
-chr1	8675986	.	ATTTATTTATTT	.	.	.	END=8675997;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:31,13,0,0:3,31:NULL:243.113:366.612,131.36:0.0,0.0:0.0,2.39922e-09,1.0	0/0:30:0.999964:3,3:3-3,3-3:18,12,0,0:3,18:NULL:186.787:326.675,113.385:0.0,0.0:0.0,2.80001e-05,0.999972
-chr1	8676389	.	AAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC,AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	END=8676418;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.960004:8,9:8-9,9-9:13,10,0,5:8,4|9,9:5,3|6,1|7,1:195.192:366.612,131.36:0.45695,0.0:0.0,4.26259e-06,0.999995	0/0:34:0.999914:6,6:6-6,6-6:17,9,0,8:6,17:3,3|4,2|5,3:213.522:326.675,113.385:0.0,0.0:5.66594e-34,3.7178e-05,0.999964
-chr1	8678460	.	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8678479;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.955016:17,18:13-17,13-18:7,10,0,6:17,5|18,2:6,1|8,2|15,1|16,2:180.984:366.612,131.36:1.33704,1.91348:0.0,0.0,1.0	0/0:14:0.896921:10,10:10-11,10-11:7,4,0,2:10,7:5,1|8,1:79.5285:326.675,113.385:0.475866,0.475866:1.70654e-11,0.0425545,0.957517
-chr1	8678493	.	TACATATATACATATATACATATA	.	.	.	END=8678516;RU=tacatata;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999933:3,3:3-3,3-3:17,10,0,0:3,17:NULL:163.081:366.612,131.36:0.0,0.0:0.0,5.9905e-05,0.999941	0/0:16:0.992139:3,3:3-3,3-3:10,4,0,2:3,10:2,2:88.166:326.675,113.385:0.0,0.0:2.3385e-30,0.00314205,0.996867
-chr1	8679768	.	ATAAAATAAAATAAA	.	.	.	END=8679782;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:3,3:3-3,3-3:20,22,0,2:3,20:2,2:296.659:366.612,131.36:0.0,0.0:0.0,3.54493e-06,1.0	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.886:326.675,113.385:0.0,0.0:0.0,3.57574e-07,1.0
-chr1	8681683	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	END=8681750;RU=aagg;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.280439:12,12:11-12,11-12:2,10,0,6:12,2:6,1|9,1|10,1|11,2|12,1:148.243:366.612,131.36:0.437216,0.437216:1.0,0.0,0.0	0/0:39:0.280034:17,17:13-17,13-17:2,17,0,19:17,2:2,1|4,1|5,2|6,2|7,3|8,1|10,3|12,1|13,3|15,2:298.812:326.675,113.385:1.83337,1.83337:2.37018e-05,0.427834,0.572237
-chr1	8682359	.	CACACACACACACACACACA	CACACACACACACACACACACA	.	.	END=8682378;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:32:0.691927:10,11:10-10,10-11:15,11,0,5:10,12|11,3:5,1|7,2|8,1|9,1:208.492:366.612,131.36:0.0,0.533001:1.26372e-21,5.01982e-05,0.999949	0/0:41:0.999694:10,10:10-11,10-11:15,17,0,8:10,15:6,2|7,1|8,1|9,3|10,1:286.511:326.675,113.385:0.169767,0.169767:4.6019e-29,8.81946e-05,0.999911
-chr1	8682430	.	CTCTCTCTCTCT	CTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8682441;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:1.0:5,5:5-5,5-5:20,10,0,0:5,20:NULL:171.799:366.612,131.36:0.0,0.0:0.999995,4.85419e-06,1.68552e-36	0/2:33:0.451644:6,13:6-6,5-13:14,17,0,2:5,2|6,12:5,1|13,1:252.805:326.675,113.385:0.0,3.78075:7.49433e-20,0.000777866,0.999226
-chr1	8682935	.	CACACACACACACACA	CACACACACACACA	.	.	END=8682950;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.152359:7,7:5-8,5-8:2,23,0,0:7,2:NULL:218.895:366.612,131.36:0.89526,0.89526:0.71237,0.287602,3.5247e-05	0/0:32:0.999976:8,8:8-8,8-8:18,12,0,2:8,18:4,1|6,1:195.974:326.675,113.385:0.0,0.0:1.15451e-31,2.82206e-05,0.999972
-chr1	8703164	.	GGCTCAGGGCTCAGGGCTCAG	.	.	.	END=8703184;RU=ggctcag;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:32,20,0,2:3,32:2,2:327.025:366.612,131.36:0.0,0.0:0.0,8.8737e-10,1.0	0/0:40:1.0:3,3:3-3,3-3:20,17,0,3:3,20:2,3:257.668:326.675,113.385:0.0,0.0:0.0,6.52146e-06,0.999994
-chr1	8704534	.	AACAAACAAACA	.	.	.	END=8704545;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.86:366.612,131.36:0.0,0.0:0.0,2.13067e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:28,8,0,0:3,28:NULL:181.495:326.675,113.385:0.0,0.0:0.0,2.64883e-08,1.0
-chr1	8705430	.	CAAACAAACAAA	.	.	.	END=8705441;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,11,0,2:3,22:2,2:208.072:366.612,131.36:0.0,0.0:0.0,1.44749e-06,1.0	0/0:29:0.999935:3,3:3-3,3-3:17,12,0,0:3,17:NULL:172.513:326.675,113.385:0.0,0.0:0.0,4.61238e-05,0.999956
-chr1	8707303	.	ATGATGATGATG	.	.	.	END=8707314;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:27,16,0,4:4,27:3,4:286.396:366.612,131.36:0.0,0.0:0.0,3.8379e-08,1.0	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:196.225:326.675,113.385:0.0,0.0:0.0,3.46047e-07,1.0
-chr1	8713399	.	AGCAGCAGCAGC	.	.	.	END=8713410;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:4,4:4-4,4-4:41,18,0,0:4,41:NULL:319.55:366.612,131.36:0.0,0.0:0.0,3.76502e-12,1.0	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:222.677:326.675,113.385:0.0,0.0:0.0,2.32344e-07,1.0
-chr1	8714830	.	CATAACATAACATAACATAACATAA	.	.	.	END=8714854;RU=cataa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:5,5:4-5,4-5:22,17,0,4:5,22:2,2|3,2:270.52:366.612,131.36:0.195027,0.195027:0.0,2.05309e-06,1.0	0/0:21:0.942765:5,5:5-5,5-5:7,8,0,6:5,7:2,1|3,3|4,2:140.677:326.675,113.385:0.0,0.0:7.30822e-19,0.0268526,0.973201
-chr1	8723775	.	CACACACACACACA	CACACACACACACACACA	.	.	END=8723788;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:1.0:7,9:7-7,9-9:22,13,0,0:7,11|9,11:NULL:214.794:366.612,131.36:0.0,0.0:0.0,9.26156e-24,1.0	0/0:32:0.976786:7,7:6-7,6-7:20,12,0,0:6,2|7,18:NULL:198.465:326.675,113.385:0.44763,0.44763:9.9095e-36,0.0232696,0.976773
-chr1	8723801	.	GAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGA	.	.	END=8723818;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.989256:11,11:10-12,10-12:21,13,0,2:10,2|11,17|12,2:6,1|9,1:228.637:366.612,131.36:0.42884,0.42884:0.0,2.20501e-06,1.0	0/0:29:0.999479:9,9:9-9,9-9:15,14,0,0:9,15:NULL:187.994:326.675,113.385:0.0,0.0:3.7835e-27,0.000316983,0.999683
-chr1	8724576	.	AAAGAAAGAAAG	.	.	.	END=8724587;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.744:366.612,131.36:0.0,0.0:0.0,2.32757e-06,1.0	0/0:24:0.999755:3,3:3-3,3-3:15,7,0,2:3,15:2,2:134.146:326.675,113.385:0.0,0.0:0.0,9.06099e-05,0.999911
-chr1	8734504	.	ACACACACACAC	.	.	.	END=8734515;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:6,6:5-6,5-6:20,10,0,0:6,20:NULL:172.515:366.612,131.36:0.21692,0.21692:6.7e-44,1.11878e-05,0.999993	0/0:27:0.980354:6,6:5-7,5-7:19,5,0,2:5,2|6,17:4,1|5,1:149.183:326.675,113.385:0.503882,0.503882:8.75392e-34,0.0196928,0.980346
-chr1	8735119	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACA	.	.	END=8735148;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.378135:16,17:15-16,15-18:9,17,0,6:15,3|16,6:7,1|8,2|10,1|13,1|17,1:260.347:366.612,131.36:0.431574,1.08333:1.95696e-19,5.77162e-07,1.0	0/0:20:0.943262:15,15:14-15,14-15:12,4,0,4:14,2|15,10:5,2|10,1|12,1:123.677:326.675,113.385:0.298675,0.298675:5.12276e-12,0.0537033,0.946383
-chr1	8737285	.	AAACAAACAAAC	.	.	.	END=8737296;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:299.192:366.612,131.36:0.0,0.0:0.0,1.45837e-10,1.0	0/0:38:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.572:326.675,113.385:0.0,0.0:0.0,8.58223e-09,1.0
-chr1	8737336	.	ACAAAACAAAACAAAACAAAACAAAACAAA	ACAAAACAAAACAAAACAAA	.	.	END=8737365;RU=acaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.999942:4,4:4-4,4-4:16,23,0,4:4,16:2,2|3,2:303.954:366.612,131.36:0.0,0.0:0.999987,1.18551e-05,0.0	0/0:28:0.993833:6,6:6-6,6-6:10,13,0,5:6,10:3,1|4,1|5,3:191.525:326.675,113.385:0.0,0.0:3.38817e-33,0.00281481,0.997193
-chr1	8737581	.	AAAACAAAACAAAACAAAAC	.	.	.	END=8737600;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:4,4:3-4,3-4:22,16,0,2:4,22:3,2:264.311:366.612,131.36:0.311527,0.311527:0.0,3.04094e-06,1.0	0/0:18:0.995904:4,4:4-4,4-4:11,4,0,3:4,11:3,3:102.332:326.675,113.385:0.0,0.0:8.70255e-37,0.00136317,0.998641
-chr1	8743177	.	TATATATATATATA	TATATATATA	.	.	END=8743190;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.867895:5,5:5-5,5-5:6,13,0,0:5,6:NULL:145.689:366.612,131.36:0.0,0.0:0.977026,0.0230208,1.56871e-16	0/0:14:0.889317:7,7:6-8,6-8:7,5,0,0:7,7:NULL:73.888:326.675,113.385:0.608246,0.608246:3.74191e-10,0.065115,0.934977
-chr1	8743192	.	TTGTTGTTGTTGTTG	TTGTTGTTGTTG	.	.	END=8743206;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.110593:4,4:4-5,4-5:0,13,0,2:NULL:4,2:136.973:366.612,131.36:0.489874,0.489874:0.214803,0.531368,0.253882	0/0:21:0.995999:5,5:5-5,5-5:11,8,0,2:5,11:3,1|4,1:129.239:326.675,113.385:0.0,0.0:1.82559e-33,0.00187478,0.998132
-chr1	8747307	.	CTTTCTTTCTTT	.	.	.	END=8747318;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.997834:3,3:3-3,3-3:12,4,0,0:3,12:NULL:83.5965:366.612,131.36:0.0,0.0:8.14254e-35,0.000934292,0.999067	0/0:19:0.998932:3,3:3-3,3-3:13,6,0,0:3,13:NULL:103.89:326.675,113.385:0.0,0.0:9.97061e-38,0.00050504,0.999499
-chr1	8747937	.	TTTATTTATTTA	.	.	.	END=8747948;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999946:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.806:366.612,131.36:0.0,0.0:0.0,2.47065e-05,0.999978	0/0:13:0.98465:3,3:3-3,3-3:9,4,0,0:3,9:NULL:73.8153:326.675,113.385:0.0,0.0:7.94114e-30,0.00766915,0.992348
-chr1	8748060	.	TTTTGTTTTGTTTTG	TTTTGTTTTG	.	.	END=8748074;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.080817:2,2:1-4,1-4:0,10,0,0:NULL:NULL:90.1502:366.612,131.36:0.699686,0.699686:0.285972,0.507413,0.206621	0/0:15:0.990939:3,3:3-3,3-3:10,5,0,0:3,10:NULL:87.1438:326.675,113.385:0.0,0.0:2.88402e-32,0.00531553,0.9947
-chr1	8750524	.	TCTCTCTCTCTC	TCTCTCTC	.	.	END=8750535;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:28:1.0:4,6:4-6,6-6:18,10,0,0:4,5|6,13:NULL:181.687:366.612,131.36:0.647134,0.0:4.78554e-25,1.0,1.79426e-07	0/0:19:0.997357:6,6:6-6,6-6:12,5,0,2:6,12:4,2:114.706:326.675,113.385:0.0,0.0:1.90457e-24,0.00151952,0.998488
-chr1	8750590	.	TCTCTCTCTC	.	.	.	END=8750599;RU=tc;PERIOD=2;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.958213:5,5:5-5,5-5:8,12,0,0:5,8:NULL:147.136:366.612,131.36:0.0990099,0.0990099:7.00962e-20,0.0238383,0.976206	0/0:17:0.989181:5,5:5-13,5-13:11,5,0,0:5,11:NULL:93.3733:326.675,113.385:3.99824,3.99824:3.62781e-27,0.00379959,0.99621
-chr1	8753159	.	AGAGAGAGAGAG	.	.	.	END=8753170;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999384:6,6:6-6,6-6:14,15,0,0:6,14:NULL:194.554:366.612,131.36:0.0,0.0:2.70498e-32,0.000309613,0.999691	0/0:34:0.999963:6,6:6-6,6-6:17,14,0,3:6,17:4,1|5,2:225.969:326.675,113.385:0.0,0.0:4.18258e-39,1.76549e-05,0.999986
-chr1	8754911	.	TTTGTTTGTTTG	.	.	.	END=8754922;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.992501:3,3:3-3,3-3:10,5,0,0:3,10:NULL:85.1877:366.612,131.36:0.0,0.0:1.03384e-34,0.00308253,0.996927	0/0:22:0.997164:3,3:3-4,3-4:12,9,0,0:3,12:NULL:132.107:326.675,113.385:0.475866,0.475866:1.13921e-40,0.00179077,0.998216
-chr1	8758313	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=8758332;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.994917:5,5:5-5,5-5:11,12,0,4:5,11:3,3|4,1:184.025:366.612,131.36:0.0,0.0:5.55056e-32,0.00249623,0.997511	0/0:27:0.999632:5,5:5-5,5-5:14,10,0,3:5,14:3,2|4,1:170.794:326.675,113.385:0.0,0.0:7.5234e-41,0.000212208,0.999789
-chr1	8759459	.	TATTTATTTATT	.	.	.	END=8759470;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.917:366.612,131.36:0.0,0.0:0.0,8.85738e-06,0.999994	0/0:23:0.999922:3,3:3-3,3-3:17,6,0,0:3,17:NULL:121.223:326.675,113.385:0.0,0.0:0.0,4.54659e-05,0.999956
-chr1	8765668	.	AATAAATAAATA	.	.	.	END=8765679;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.985827:3,3:3-3,3-3:9,16,0,0:3,9:NULL:194.591:366.612,131.36:0.0,0.0:7.47013e-30,0.0105569,0.989469	0/0:13:0.959532:3,3:3-3,3-3:8,5,0,0:3,8:NULL:77.3003:326.675,113.385:0.0,0.0:1.84624e-26,0.0212171,0.978826
-chr1	8771953	.	AGGAAAGGAAAGGAA	.	.	.	END=8771967;RU=aggaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999873:3,3:3-3,3-3:16,8,0,0:3,16:NULL:132.728:366.612,131.36:0.0,0.0:0.0,7.98286e-05,0.999924	0/0:26:0.999792:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.516:326.675,113.385:0.0,0.0:0.0,0.000158064,0.999843
-chr1	8778970	.	TTTCTTTCTTTC	.	.	.	END=8778981;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999944:3,3:3-3,3-3:17,14,0,2:3,17:2,2:215.313:366.612,131.36:0.0,0.0:0.0,2.12768e-05,0.999979	0/0:31:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:175.96:326.675,113.385:0.0,0.0:0.0,6.06985e-06,0.999994
-chr1	8783282	.	ATATATATATATAT	ATATATATATATATATAT	.	.	END=8783295;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.997796:9,9:8-9,8-9:13,13,0,0:9,13:NULL:170.275:366.612,131.36:0.222277,0.222277:1.11918e-35,0.00061759,0.999385	0/0:13:0.49888:7,7:6-7,6-7:10,3,0,0:6,2|7,8:NULL:75.1751:326.675,113.385:0.486863,0.486863:9.80189e-09,0.497037,0.502977
-chr1	8784610	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8784647;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.644557:11,11:10-12,10-12:14,13,0,0:10,2|11,10|12,2:NULL:188.579:366.612,131.36:0.536667,0.536667:1.0,0.0,0.0	0/0:24:0.971893:19,19:17-19,17-19:9,6,0,7:19,9:7,1|11,2|13,1|17,2|18,1:148.768:326.675,113.385:0.634591,0.634591:7.52986e-13,0.0110308,0.988993
-chr1	8784672	.	AAAACAAAACAAAAC	.	.	.	END=8784686;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999716:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.975:366.612,131.36:0.0,0.0:0.0,0.000161651,0.999841	0/0:22:0.998793:3,3:3-3,3-3:13,9,0,0:3,13:NULL:133.991:326.675,113.385:0.0,0.0:1e-44,0.000765121,0.99924
-chr1	8785066	.	TAAATAAATAAA	.	.	.	END=8785077;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999868:3,3:3-3,3-3:16,13,0,2:3,16:2,2:195.894:366.612,131.36:0.0,0.0:0.0,6.85765e-05,0.999933	0/0:22:0.999799:3,3:3-3,3-3:16,6,0,0:3,16:NULL:123.274:326.675,113.385:0.0,0.0:0.0,0.000122937,0.999879
-chr1	8786909	.	CTCTTGCTCTTGCTCTTGCTCTTG	.	.	.	END=8786932;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998181:4,4:4-4,4-4:12,14,0,2:4,12:3,2:192.038:366.612,131.36:0.0,0.0:4.48662e-35,0.0012672,0.998739	0/0:32:0.998131:4,4:4-4,4-4:12,17,0,3:4,12:3,3:221.197:326.675,113.385:0.0,0.0:8.55373e-35,0.00145832,0.998549
-chr1	8790230	.	CTCTTGCTCTTGCTCTTGCTCTTG	CTCTTGCTCTTGCTCTTGCTCTTGCTCTTG	.	.	END=8790253;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999955:5,5:4-5,4-5:18,17,0,5:5,18:2,1|3,1|4,3:261.763:366.612,131.36:0.169767,0.169767:0.0,1.11323e-05,0.999993	0/0:22:0.985433:4,4:4-4,4-4:9,11,0,2:4,9:3,2:153.147:326.675,113.385:0.0,0.0:4.64383e-30,0.00909807,0.990925
-chr1	8794964	.	ATATATATATATATATATATATAT	ATATATATATATAT,ATATATATATATATATATATAT	.	.	END=8794987;RU=at;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:1.00001:7,7:7-7,7-7:22,5,0,0:7,22:NULL:135.279:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/0:11:0.932931:11,12:11-12,11-12:6,5,0,0:11,2|12,4:NULL:74.3812:326.675,113.385:0.484441,0.21692:0.00011127,0.943244,0.0567284
-chr1	8796394	.	ATTTATTTATTT	ATTT	.	.	END=8796405;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0726585:1,1:1-1,1-1:0,14,0,0:NULL:NULL:121.378:366.612,131.36:0.0,0.0:0.142909,0.492976,0.364275	0/0:20:0.998744:3,3:3-3,3-3:13,7,0,0:3,13:NULL:116.182:326.675,113.385:0.0,0.0:1.53173e-38,0.000632784,0.99937
-chr1	8798684	.	AGCAGCAGCAGC	AGC	.	.	END=8798695;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.0214006:1,1:1-4,1-4:0,1,0,0:NULL:NULL:8.21738:366.612,131.36:1.29472,1.29472:0.184075,0.489982,0.326062	0/0:37:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:226.317:326.675,113.385:0.0,0.0:0.0,5.43975e-06,0.999995
-chr1	8800250	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGA	.	.	END=8800297;RU=agga;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.139509:1,1:1-1,1-1:0,19,0,0:NULL:NULL:173.395:366.612,131.36:0.0,0.0:0.936995,0.0627439,0.000350964	0/0:22:0.594842:12,12:12-12,12-12:4,8,0,10:12,4:2,1|4,2|6,1|7,2|8,1|9,2|11,1:162.595:326.675,113.385:0.0990099,0.0990099:1.58453e-08,0.225544,0.774489
-chr1	8800676	.	TAAATAAATAAA	.	.	.	END=8800687;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999959:3,3:3-3,3-3:18,10,0,0:3,18:NULL:167.07:366.612,131.36:0.0,0.0:0.0,2.59607e-05,0.999978	0/0:20:0.99217:3,3:3-3,3-3:10,8,0,2:3,10:2,2:128.633:326.675,113.385:0.0,0.0:5.11394e-33,0.00312934,0.996881
-chr1	8800714	.	AACAACAACAAC	.	.	.	END=8800725;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.987725:4,4:4-4,4-4:11,14,0,0:4,11:NULL:174.339:366.612,131.36:0.0,0.0:2.62346e-30,0.00853959,0.991479	0/0:21:0.992712:4,4:4-4,4-4:11,10,0,0:4,11:NULL:135.379:326.675,113.385:0.0,0.0:6.64144e-31,0.00496701,0.995047
-chr1	8805447	.	GGGGGAGGGGGAGGGGGA	GGGGGA	.	.	END=8805464;RU=ggggga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.109134:1,1:1-2,1-2:0,16,0,0:NULL:NULL:147.015:366.612,131.36:0.38244,0.38244:0.332073,0.509501,0.15845	0/0:20:0.990143:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.811:326.675,113.385:0.0,0.0:1.04539e-30,0.00676799,0.993249
-chr1	8807437	.	TTTGTTTGTTTG	.	.	.	END=8807448;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:182.822:366.612,131.36:0.0,0.0:0.0,8.47762e-06,0.999994	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:195.556:326.675,113.385:0.0,0.0:0.0,1.13934e-06,1.0
-chr1	8810096	.	TAAATAAATAAA	.	.	.	END=8810107;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.990155:3,3:3-3,3-3:10,7,0,0:3,10:NULL:106.147:366.612,131.36:0.0,0.0:1.39982e-33,0.00538124,0.994632	0/0:25:0.999928:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.067:326.675,113.385:0.0,0.0:0.0,3.91424e-05,0.999963
-chr1	8810477	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=8810494;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:21,20,0,0:3,21:NULL:267.378:366.612,131.36:0.0,0.0:0.0,2.79993e-06,1.0	0/0:30:0.999814:3,3:3-3,3-3:15,12,0,3:3,15:2,3:192.709:326.675,113.385:0.0,0.0:0.0,9.18495e-05,0.99991
-chr1	8814191	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8814208;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999651:9,9:8-9,8-9:21,14,0,5:8,2|9,19:4,1|6,1|7,2|8,1:257.454:366.612,131.36:0.169767,0.169767:1.22881e-31,0.000361579,0.999643	0/0:26:0.966826:9,9:8-10,8-10:17,3,0,5:8,3|9,14:4,1|7,1|8,2|9,1:142.198:326.675,113.385:0.461008,0.461008:3.05001e-29,0.0331402,0.966922
-chr1	8815663	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8815726;RU=tc;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:19:0.0165681:30,46:16-31,16-49:0,10,0,7:NULL:13,2|15,1|18,1|30,2|46,1:150.577:366.612,131.36:7.66383,14.7344:8.05921e-08,0.577402,0.422683	1/1:17:0.0181341:28,28:28-32,28-32:0,8,0,7:NULL:4,1|8,1|9,1|11,1|21,1|22,1|26,1:128.18:326.675,113.385:1.25387,1.25387:0.387564,0.473392,0.139121
-chr1	8816641	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=8816672;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.96131:13,13:13-13,13-13:9,14,0,0:13,9:NULL:162.474:366.612,131.36:0.139319,0.139319:0.997654,0.00235383,2.07518e-22	0/0:23:0.80832:16,16:15-16,15-16:10,9,0,4:15,2|16,8:8,1|12,1|15,2:161.939:326.675,113.385:0.390807,0.390807:1.74484e-09,0.183516,0.816552
-chr1	8817844	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8817913;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.150498:11,11:11-18,11-18:23,11,0,5:11,23:6,1|7,2|10,1|16,1:257.355:366.612,131.36:2.58994,2.58994:1.0,0.0,0.0	2/2:19:0.011417:34,34:9-34,9-34:0,11,0,8:NULL:9,2|11,1|18,1|21,1|23,1|29,1|33,1:161.9:326.675,113.385:9.00396,9.00396:0.497947,0.47067,0.0314397
-chr1	8819083	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8819132;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:44:0.78078:27,28:26-27,26-28:7,28,0,9:26,3|27,4:5,2|11,1|12,1|18,1|20,1|23,1|26,1|28,1:373.218:366.612,131.36:0.398507,0.7392:2.9394e-26,7.47407e-05,0.999926	1/1:26:0.153341:26,26:24-26,24-26:2,12,0,10:26,2:5,2|6,2|8,1|10,1|16,1|17,1|19,1|23,1:201.787:326.675,113.385:0.915079,0.915079:0.000331256,0.3795,0.620228
-chr1	8820361	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8820396;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:29:0.301035:25,29:25-25,25-29:5,14,0,10:25,5:4,1|6,1|8,1|12,1|13,2|17,1|18,1|23,1|27,1:236.256:366.612,131.36:0.0,1.69778:0.0,0.0,1.0	0/1:29:0.294315:18,23:18-19,16-23:9,9,0,9:18,7|19,2:5,2|6,1|8,1|9,2|13,1|14,1|23,1:201.422:326.675,113.385:0.236383,2.38098:3.51614e-15,2.22824e-07,1.0
-chr1	8823929	.	TGGGTGGGTGGG	.	.	.	END=8823940;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:30,22,0,4:3,30:2,4:347.42:366.612,131.36:0.0,0.0:0.0,4.20299e-09,1.0	0/0:30:0.99987:3,3:3-3,3-3:15,12,0,3:3,15:2,3:186.501:326.675,113.385:0.0,0.0:0.0,6.40528e-05,0.99994
-chr1	8824054	.	ATTTATTTATTT	.	.	.	END=8824065;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:259.214:366.612,131.36:0.0,0.0:0.0,2.92656e-07,1.0	0/0:40:1.0:3,3:3-3,3-3:30,8,0,2:3,30:2,2:203.191:326.675,113.385:0.0,0.0:0.0,2.58817e-09,1.0
-chr1	8827247	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=8827291;RU=ttg;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.00001:10,10:8-10,8-10:21,24,0,10:10,21:4,2|5,1|7,2|8,1|9,4:383.611:366.612,131.36:0.339533,0.339533:1.0,0.0,0.0	0/0:47:0.999999:15,15:15-15,15-15:19,13,0,15:15,19:3,2|4,1|5,1|6,1|7,2|9,1|10,1|11,1|12,1|13,1|14,3:312.501:326.675,113.385:0.0,0.0:1.25107e-38,7.04996e-06,0.999994
-chr1	8833833	.	ACCACCACCACCACCACC	.	.	.	END=8833850;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:1.0:6,6:6-6,6-6:34,33,0,7:6,34:3,1|4,3|5,3:485.676:366.612,131.36:0.0,0.0:0.0,1.99673e-10,1.0	0/0:47:1.0:6,6:6-6,6-6:28,11,0,8:6,28:3,1|4,3|5,4:273.788:326.675,113.385:0.0,0.0:0.0,1.24028e-08,1.0
-chr1	8834106	.	AAAGAAAGAAAG	.	.	.	END=8834117;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:28,25,0,0:3,28:NULL:342.64:366.612,131.36:0.0,0.0:0.0,1.26556e-07,1.0	0/0:34:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:202.146:326.675,113.385:0.0,0.0:0.0,3.19142e-06,1.0
-chr1	8835404	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8835449;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:51:0.360317:19,23:19-19,18-23:15,26,0,9:18,3|19,12:4,1|5,1|7,1|8,1|9,1|12,1|13,1|17,1|23,1:389.399:366.612,131.36:0.0,2.07647:0.000589075,0.999415,9.12762e-34	2/0:42:0.679654:22,23:22-23,23-23:17,12,0,13:22,7|23,10:5,2|6,1|7,2|8,1|9,1|17,2|20,1|21,1|22,2:298.777:326.675,113.385:0.495841,0.0:9.49549e-09,0.679662,0.320347
-chr1	8837723	.	AATAAATAAATAAATA	AATA	.	.	END=8837738;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.31628:1,1:1-2,1-2:0,28,0,0:NULL:NULL:273.351:366.612,131.36:0.195027,0.195027:0.705939,0.277012,0.0170776	0/0:21:0.999735:4,4:4-4,4-4:15,4,0,2:4,15:2,1|3,1:108.529:326.675,113.385:0.0,0.0:1e-45,0.000120001,0.99988
-chr1	8840838	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=8840876;RU=ctt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:27:0.974815:12,13:12-13,13-13:13,8,0,6:12,3|13,10:4,2|7,1|9,1|10,1|11,1:181.955:366.612,131.36:0.489073,0.0:6.14641e-24,0.974835,0.0252135	0/0:37:0.997373:13,13:13-13,13-13:12,17,0,8:13,12:4,1|6,1|8,1|9,3|10,1|11,1:258.066:326.675,113.385:0.0,0.0:6.14404e-33,0.00142455,0.99858
-chr1	8848162	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8848191;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.0236259:14,14:14-17,14-17:0,1,0,0:NULL:NULL:9.91206:366.612,131.36:1.32769,1.32769:0.0236151,0.261023,0.715409	0/0:24:0.991418:15,15:13-16,13-16:11,4,0,6:15,11:5,1|6,2|10,1|14,2:136.868:326.675,113.385:0.489474,0.489474:2.55922e-15,0.00317791,0.99683
-chr1	8848195	.	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	GAA,GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA,GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=8848293;RU=gaa;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:2:0.000598994:1,59:1-59,1-59:0,2,0,0:NULL:NULL:18.9572:366.612,131.36:24.6864,23.1134:0.10077,0.561584,0.337791	2/2:23:0.322535:32,32:30-34,30-34:2,9,0,12:32,2:4,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|28,1|30,1|31,1|32,1:189.229:326.675,113.385:0.626507,0.626507:0.539029,0.458295,0.00279247
-chr1	8848386	.	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	.	.	END=8848480;RU=gggaa;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0376241:12,12:7-12,7-12:0,1,0,5:NULL:4,1|5,1|7,1|10,1|11,1:45.0742:366.612,131.36:1.23203,1.23203:1.0,0.0,0.0	0/0:25:0.460313:19,19:18-19,18-19:3,9,0,13:19,3:3,1|5,1|8,1|10,1|11,1|13,1|15,1|17,1|18,5:193.919:326.675,113.385:0.284901,0.284901:1.42522e-06,0.210658,0.789391
-chr1	8850301	.	CATACATACATA	.	.	.	END=8850312;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.048:366.612,131.36:0.0,0.0:0.0,1.75028e-07,1.0	0/0:25:1.00001:3,3:3-3,3-3:20,3,0,2:3,20:2,2:124.456:326.675,113.385:0.0,0.0:0.0,3.10488e-06,1.0
-chr1	8851721	.	AGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAA	.	.	END=8851744;RU=agaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:35:1.0:4,6:4-6,6-6:12,23,0,0:4,4|6,8:NULL:259.097:366.612,131.36:0.339533,0.0:1.20748e-15,1.0,2.89637e-09	0/0:40:0.995531:6,6:5-6,5-6:11,23,0,5:6,11:2,1|4,1|5,3:285.933:326.675,113.385:0.425627,0.425627:3.18763e-21,0.00288447,0.997124
-chr1	8852685	.	GGGTGGGTGGGT	.	.	.	END=8852696;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.350289:3,3:1-3,1-3:2,25,0,0:3,2:NULL:230.69:366.612,131.36:0.687673,0.687673:8.77469e-07,0.40522,0.594852	0/0:28:0.928769:3,3:3-3,3-3:7,21,0,0:3,7:NULL:222.275:326.675,113.385:0.19802,0.19802:3.35873e-21,0.043614,0.956457
-chr1	8856513	.	TATATATATATA	TATATATATA	.	.	END=8856524;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:0.971816:5,6:4-6,6-6:18,18,0,0:4,3|5,5|6,10:NULL:253.14:366.612,131.36:0.613062,0.0:3.13099e-10,0.984218,0.0158172	0/0:17:0.891103:6,6:5-6,5-6:14,3,0,0:5,3|6,11:NULL:92.127:326.675,113.385:0.36513,0.36513:2.12696e-13,0.10786,0.892238
-chr1	8857202	.	GAGAGAGAGAGA	GAGAGAGAGA	.	.	END=8857213;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.00001:5,5:5-5,5-5:23,24,0,2:5,23:4,2:322.378:366.612,131.36:0.0,0.0:1.0,7.08375e-07,0.0	0/0:25:0.999129:6,6:5-6,5-6:13,8,0,3:6,13:5,3:149.8:326.675,113.385:0.419363,0.419363:1.06978e-35,0.000363674,0.999637
-chr1	8860742	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8860779;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.940994:20,20:19-20,19-20:8,23,0,13:20,8:5,2|8,1|10,1|11,1|13,1|14,2|15,1|16,2|17,1|19,1:351.72:366.612,131.36:0.323567,0.323567:2.8294e-23,0.0144076,0.985623	0/1:30:0.996848:19,20:18-19,18-20:11,5,0,14:18,2|19,6|20,3:4,1|5,2|6,2|7,1|9,1|10,2|13,2|14,1|20,2:219.945:326.675,113.385:0.323567,0.363786:2.20948e-23,0.000960826,0.999043
-chr1	8863873	.	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG,CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG,CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	.	.	END=8863991;RU=ctgcctg;PERIOD=7;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:59:0.924128:13,20:10-16,15-23:2,23,1,29:13,2:2,1|5,1|6,2|7,2|8,3|9,6|10,4|11,1|13,4|14,2|15,3:459.505:366.612,131.36:1.67955,2.60763:0.0,1.0,7.78635e-10	2/2:50:0.179105:16,16:14-16,14-16:0,18,0,32:NULL:2,1|3,4|4,1|6,3|7,1|8,5|9,2|10,2|11,4|13,4|14,1|15,2|16,2:378.902:326.675,113.385:0.607763,0.607763:0.385714,0.501196,0.113186
-chr1	8865199	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8865252;RU=tc;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.483501:22,24:22-27,23-27:7,21,0,13:22,3|23,2|24,2:4,1|5,1|6,1|7,2|8,1|9,1|11,2|13,1|14,1|22,1|23,1:336.074:366.612,131.36:1.62732,1.37962:0.997519,0.00248811,6.59812e-10	3/0:39:0.968546:26,27:5-27,5-27:19,8,0,9:25,4|26,6|27,9:5,2|6,1|8,1|12,1|15,1|16,1|22,1|26,1:251.944:326.675,113.385:9.18917,7.11396:2.393e-07,0.974888,0.0251617
-chr1	8865253	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8865286;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.831195:15,17:12-15,12-17:9,17,0,4:12,2|14,2|15,3|17,2:11,1|12,2|13,1:243.725:366.612,131.36:1.06407,1.95794:0.10753,0.892336,0.000235103	0/2:25:0.353293:17,18:17-17,17-18:11,8,0,5:17,11:15,4|18,1:170.877:326.675,113.385:0.0,0.537032:1.58965e-25,3.94925e-08,1.0
-chr1	8865886	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8865933;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.483152:24,24:24-26,24-26:4,13,0,9:24,4:7,1|9,2|14,1|15,1|16,1|20,1|24,2:211.934:366.612,131.36:0.744223,0.744223:1.16041e-19,0.0937735,0.906328	0/0:39:0.590958:24,24:24-25,24-25:16,11,0,12:24,13|25,3:5,1|7,2|12,1|13,3|15,1|17,1|19,1|21,1|23,1:275.553:326.675,113.385:0.481803,0.481803:4.06428e-17,0.000140235,0.999864
-chr1	8866609	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8866646;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.944924:20,20:19-24,19-24:15,14,0,17:19,3|20,12:5,1|6,1|8,1|9,2|10,1|11,2|12,1|14,2|15,1|16,2|17,2|19,1:331.989:366.612,131.36:1.62895,1.62895:8.41321e-30,0.000257595,0.999743	0/1:53:0.898856:19,20:19-19,19-20:19,17,0,16:18,2|19,17:5,2|6,1|9,1|10,1|11,2|12,2|14,2|15,4|20,1:390.696:326.675,113.385:0.0,0.472558:6.33979e-22,2.9656e-07,1.0
-chr1	8868138	.	CAAACCAAACCAAAC	.	.	.	END=8868152;RU=caaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:23,10,0,2:3,23:2,2:199.603:366.612,131.36:0.0,0.0:0.0,5.30068e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:28,22,0,0:3,28:NULL:315.714:326.675,113.385:0.0,0.0:0.0,4.2339e-08,1.0
-chr1	8869124	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8869175;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0181264:22,22:23-26,23-26:0,4,0,0:NULL:NULL:37.1521:366.612,131.36:0.783868,0.783868:0.46442,0.437085,0.0986378	2/2:3:0.029014:23,23:23-26,23-26:0,2,0,0:NULL:NULL:22.634:326.675,113.385:1.2356,1.2356:0.258741,0.506922,0.23435
-chr1	8870489	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8870542;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.492783:22,22:19-22,19-22:4,18,0,12:22,4:5,1|9,3|10,2|12,1|19,1|20,1|21,3:273.202:366.612,131.36:1.40196,1.40196:1.0,0.0,0.0	0/2:27:0.229769:27,39:25-27,26-41:5,8,0,13:26,3|27,2:5,2|6,1|11,1|14,1|18,1|19,2|21,1|22,2|23,1|39,1:209.587:326.675,113.385:1.34486,6.22146:1.87855e-07,0.175017,0.825054
-chr1	8870819	.	TTTTATTTTATTTTA	.	.	.	END=8870833;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:209.892:366.612,131.36:0.0,0.0:0.0,1.69948e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:30,7,0,0:3,30:NULL:183.953:326.675,113.385:0.0,0.0:0.0,4.23064e-09,1.0
-chr1	8881143	.	AAATAAATAAAT	.	.	.	END=8881154;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999663:3,3:3-3,3-3:15,16,0,0:3,15:NULL:202.324:366.612,131.36:0.0,0.0:0.0,0.000200851,0.999803	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.894:326.675,113.385:0.0,0.0:0.0,6.30973e-07,1.0
-chr1	8891081	.	CATGCATGCATG	.	.	.	END=8891092;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.965842:3,3:3-3,3-3:8,7,0,0:3,8:NULL:95.5284:366.612,131.36:0.0,0.0:6.51114e-17,0.0148534,0.985179	0/0:21:0.999769:3,3:3-3,3-3:15,6,0,0:3,15:NULL:121.647:326.675,113.385:0.0,0.0:3.8172e-31,0.000124544,0.999879
-chr1	8894445	.	TTTGTTTGTTTG	.	.	.	END=8894456;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999531:3,3:3-3,3-3:14,9,0,0:3,14:NULL:139.193:366.612,131.36:0.0,0.0:0.0,0.000248745,0.999751	0/0:25:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:123.879:326.675,113.385:0.0,0.0:0.0,3.92141e-06,0.999995
-chr1	8896564	.	TCTTTCTTTCTT	.	.	.	END=8896575;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99997:3,3:3-3,3-3:18,9,0,0:3,18:NULL:151.099:366.612,131.36:0.0,0.0:0.0,2.52087e-05,0.999978	0/0:37:1.0:3,3:3-3,3-3:26,9,0,2:3,26:2,2:200.704:326.675,113.385:0.0,0.0:0.0,3.85101e-08,1.0
-chr1	8896983	.	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTT	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	END=8897012;RU=tttgtt;PERIOD=6;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.993442:4,4:4-4,4-4:11,9,0,2:4,11:2,1|3,1:142.233:366.612,131.36:0.0,0.0:0.997042,0.00296483,4.66393e-27	0/0:43:0.999962:5,5:5-5,5-5:17,20,0,6:5,17:2,3|3,1|4,2:291.268:326.675,113.385:0.0,0.0:1e-45,4.48778e-05,0.999956
-chr1	8902045	.	TCTCCTCTCCTCTCCTCTCC	.	.	.	END=8902064;RU=tctcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:26,18,0,2:4,26:2,1|3,1:285.964:366.612,131.36:0.0,0.0:0.0,1.81415e-07,1.0	0/0:35:1.0:4,4:4-4,4-4:25,6,0,4:4,25:3,4:184.34:326.675,113.385:0.0,0.0:0.0,7.11103e-08,1.0
-chr1	8903368	.	TAAATAAATAAA	.	.	.	END=8903379;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999985:3,3:3-3,3-3:18,13,0,0:3,18:NULL:189.562:366.612,131.36:0.0,0.0:0.0,2.00924e-05,0.99998	0/0:24:0.999722:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.598:326.675,113.385:0.0,0.0:0.0,0.000152183,0.999849
-chr1	8905683	.	TCTCTCTCTCTC	.	.	.	END=8905694;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999972:6,6:6-6,6-6:18,8,0,0:6,18:NULL:146.342:366.612,131.36:0.0,0.0:1.2e-43,1.97853e-05,0.99998	0/0:38:1.00001:6,6:6-6,6-6:22,16,0,0:6,22:NULL:232.951:326.675,113.385:0.0,0.0:0.0,1.45279e-06,1.0
-chr1	8907395	.	CACACACACACA	.	.	.	END=8907406;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:6,6:6-6,6-6:29,28,0,3:6,29:5,3:384.25:366.612,131.36:0.0,0.0:0.0,7.76301e-09,1.0	0/0:23:0.995262:6,6:6-6,6-6:11,12,0,0:6,11:NULL:159.469:326.675,113.385:0.0,0.0:9.17521e-26,0.00274876,0.99726
-chr1	8909209	.	TATACATATACATATACATATACATATACATATACATATACATATACA	TATACATATACATATACATATACATATACA,TATACATATACATATACATATACATATACATATACATATACA	.	.	END=8909256;RU=tataca;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.70847:5,7:5-7,7-7:13,9,0,6:5,2|7,11:4,2|5,1|6,3:187.788:366.612,131.36:0.996022,0.0:0.999782,0.000218416,2.55627e-25	0/0:19:0.868755:8,8:8-11,8-11:7,8,0,3:8,7:3,2|6,1:123.592:326.675,113.385:1.47322,1.47322:1.3311e-16,0.0746377,0.925456
-chr1	8909266	.	AGAGAGAGAGAGAG	.	.	.	END=8909279;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999991:7,7:7-7,7-7:19,5,0,0:7,19:NULL:121.83:366.612,131.36:0.0,0.0:3.2e-44,1.76356e-05,0.999986	0/0:16:0.865302:7,7:7-7,7-7:7,9,0,0:7,7:NULL:109.484:326.675,113.385:0.0,0.0:1.3106e-16,0.077319,0.922778
-chr1	8909506	.	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA,CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	.	.	END=8909589;RU=catcta;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.398597:13,15:13-13,13-16:8,15,0,22:13,8:3,5|4,2|5,2|6,2|7,3|8,1|10,3|12,3|15,1:332.842:366.612,131.36:0.0,1.12637:1.09292e-06,1.0,6.81827e-15	0/0:34:0.83448:14,14:14-14,14-14:5,10,0,19:14,5:3,2|5,3|6,1|7,1|8,2|9,1|11,1|12,3|13,5:241.438:326.675,113.385:0.0990099,0.0990099:2.26933e-10,0.0688562,0.931239
-chr1	8912340	.	ATTTATTTATTT	.	.	.	END=8912351;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.99996:3,3:3-3,3-3:17,21,0,0:3,17:NULL:253.744:366.612,131.36:0.0,0.0:0.0,4.85428e-05,0.999955	0/0:24:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.168:326.675,113.385:0.0,0.0:0.0,3.28267e-06,1.0
-chr1	8917312	.	GTTTGTTTGTTT	.	.	.	END=8917323;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:266.186:366.612,131.36:0.0,0.0:0.0,3.14481e-07,1.0	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.076:326.675,113.385:0.0,0.0:0.0,6.01145e-06,0.999995
-chr1	8917711	.	TTTGTTTGTTTGTTTG	.	.	.	END=8917726;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:4,4:4-4,4-4:22,18,0,0:4,22:NULL:258.297:366.612,131.36:0.0,0.0:0.0,3.57385e-06,1.0	0/0:39:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:240.042:326.675,113.385:0.0,0.0:0.0,7.93477e-07,1.0
-chr1	8926905	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=8926964;RU=tttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.638773:10,10:10-10,10-10:4,6,0,2:10,4:3,2:84.7246:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:22:0.527139:15,15:8-15,8-15:4,7,0,9:15,4:2,1|3,1|4,1|5,1|7,1|11,2|12,1|14,1:152.15:326.675,113.385:3.13625,3.13625:2.44555e-09,0.341895,0.658126
-chr1	8927634	.	CTCTCTCTCTCTCTCT	CTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8927649;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.0520976:4,26:1-15,4-27:0,14,0,2:NULL:15,1|26,1:148.603:366.612,131.36:4.1245,7.9309:4.7329e-14,0.622097,0.377956	0/0:52:0.999995:8,8:8-8,8-8:28,18,0,6:7,2|8,26:4,1|6,2|7,3:336.47:326.675,113.385:0.0,0.0:2.082e-42,6.42184e-06,0.999995
-chr1	8928347	.	AAACAAACAAACAAAC	.	.	.	END=8928362;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.165297:4,4:4-7,4-7:0,20,0,0:NULL:NULL:193.107:366.612,131.36:1.38465,1.38465:0.0,0.0,1.0	0/0:28:0.999279:4,4:4-4,4-4:14,14,0,0:4,14:NULL:181.16:326.675,113.385:0.0,0.0:0.0,0.000534942,0.999469
-chr1	8931732	.	TTTGTTTGTTTGTTTG	.	.	.	END=8931747;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999978:4,4:4-4,4-4:19,16,0,0:4,19:NULL:221.065:366.612,131.36:0.0,0.0:0.0,3.19381e-05,0.999971	0/0:16:0.995511:4,4:4-4,4-4:11,3,0,2:4,11:2,1|3,1:84.3862:326.675,113.385:0.0,0.0:3.83811e-36,0.00198111,0.998026
-chr1	8932575	.	TTTATTTATTTATTTA	.	.	.	END=8932590;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:275.257:366.612,131.36:0.0,0.0:0.0,1.20957e-07,1.0	0/0:28:0.99834:4,4:4-4,4-4:13,15,0,0:4,13:NULL:182.651:326.675,113.385:0.0,0.0:2.88158e-36,0.00128161,0.998724
-chr1	8937294	.	GAGGCAGAGGCAGAGGCA	GAGGCAGAGGCA	.	.	END=8937311;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999806:2,2:2-2,2-2:15,19,0,0:2,15:NULL:228.073:366.612,131.36:0.0,0.0:0.999911,8.97412e-05,0.0	0/0:18:0.999731:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.413:326.675,113.385:0.0,0.0:8.13e-43,0.000145271,0.999857
-chr1	8942569	.	TCTTTCTTTCTTTCTT	.	.	.	END=8942584;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.991117:4,4:4-4,4-4:10,11,0,4:4,10:2,1|3,3:164.949:366.612,131.36:0.0,0.0:9.58098e-29,0.0041009,0.995908	0/0:17:0.99744:4,4:4-4,4-4:12,5,0,0:4,12:NULL:92.7736:326.675,113.385:0.0,0.0:6.66647e-35,0.00157776,0.998428
-chr1	8943948	.	GTTTTTGTTTTTGTTTTT	.	.	.	END=8943965;RU=gttttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:263.669:366.612,131.36:0.0,0.0:0.0,2.36322e-07,1.0	0/0:18:0.998791:3,3:3-3,3-3:13,5,0,0:3,13:NULL:96.9382:326.675,113.385:0.0,0.0:5.3e-44,0.000689368,0.999316
-chr1	8944123	.	GTTGGTTGGTTGGTTGGTTG	GTTGGTTGGTTGGTTG	.	.	END=8944142;RU=gttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.166411:4,4:1-4,1-4:0,20,0,4:NULL:4,4:207.832:366.612,131.36:0.699545,0.699545:0.272568,0.516949,0.210488	0/0:40:1.0:5,5:5-5,5-5:25,8,0,7:5,25:3,2|4,5:221.734:326.675,113.385:0.0,0.0:0.0,7.72888e-08,1.0
-chr1	8945703	.	ACACACACACACACAC	ACACACACACACACACACAC	.	.	END=8945718;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.99884:10,10:9-10,9-10:24,17,0,4:9,3|10,21:6,1|9,2|10,1:305.1:366.612,131.36:0.309,0.309:0.0,8.1627e-08,1.0	0/0:27:0.99982:8,8:8-8,8-8:16,5,0,6:8,16:5,1|6,3|7,2:154.178:326.675,113.385:0.0,0.0:2.7511e-30,5.01359e-05,0.999949
-chr1	8946213	.	ACACACACACACACACACACAC	ACACACACAC,ACACACACACACACAC	.	.	END=8946234;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:59:1.0:5,8:5-5,8-8:35,18,0,4:5,23|8,12:6,2|7,2:359.627:366.612,131.36:0.0,0.0:1.0,1.40569e-24,0.0	0/0:32:0.993926:11,11:10-11,10-11:20,6,0,5:10,2|11,18:4,1|5,1|9,1|10,2:180.137:326.675,113.385:0.398753,0.398753:2.41738e-26,0.00609946,0.993917
-chr1	8949155	.	ATTTATTTATTT	.	.	.	END=8949166;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999956:3,3:3-3,3-3:16,28,0,2:3,16:2,2:345.392:366.612,131.36:0.0,0.0:0.0,4.12694e-05,0.999963	0/0:18:0.999001:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.5095:326.675,113.385:0.0,0.0:2.07056e-40,0.000524939,0.999477
-chr1	8954485	.	AATAAATAAATAAATA	.	.	.	END=8954500;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.339876:4,4:1-4,1-4:4,24,0,0:4,4:NULL:256.281:366.612,131.36:1.28766,1.28766:9.34563e-13,0.589488,0.410587	0/0:21:0.995693:4,4:4-4,4-4:11,8,0,2:4,11:3,2:132.213:326.675,113.385:0.0,0.0:2.8702e-33,0.00223349,0.997775
-chr1	8957579	.	AAACAAACAAAC	.	.	.	END=8957590;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.998328:3,3:3-3,3-3:12,20,0,0:3,12:NULL:230.836:366.612,131.36:0.0,0.0:1.85379e-37,0.00112181,0.998883	0/0:25:0.999946:3,3:3-3,3-3:17,6,0,2:3,17:2,2:133.668:326.675,113.385:0.0,0.0:0.0,2.2052e-05,0.999979
-chr1	8962592	.	TTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=8962619;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:7,7:7-8,7-8:22,2,0,3:7,22:3,1|5,1|6,1:130.768:366.612,131.36:0.298675,0.298675:0.0,8.84921e-07,1.0	0/0:22:0.991848:7,7:7-8,7-8:10,7,0,4:7,10:5,2|6,2:139.12:326.675,113.385:0.452422,0.452422:1.87179e-23,0.0030756,0.996935
-chr1	8966427	.	AATGAATGAATGAATG	.	.	.	END=8966442;RU=aatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:34,15,0,3:4,34:3,3:294.258:366.612,131.36:0.0,0.0:0.0,2.03031e-10,1.0	0/0:28:0.999909:4,4:4-4,4-4:16,8,0,4:4,16:3,4:164.559:326.675,113.385:0.0,0.0:0.0,3.99346e-05,0.999963
-chr1	8967541	.	AAAACAAAACAAAACAAAACAAAAC	AAAAC	.	.	END=8967565;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.030121:1,1:1-2,1-2:0,10,0,0:NULL:NULL:91.174:366.612,131.36:0.553571,0.553571:0.292457,0.527873,0.179681	0/0:18:0.991041:5,5:5-5,5-5:10,6,0,2:5,10:4,2:114.147:326.675,113.385:0.0,0.0:2.27669e-34,0.00402819,0.995983
-chr1	8969212	.	CTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8969235;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.315118:15,15:15-16,15-16:3,2,0,0:15,3:NULL:33.7344:366.612,131.36:0.539944,0.539944:0.0,0.0,1.0	0/0:11:0.660708:12,12:12-13,12-13:5,1,0,4:12,5:6,1|7,1|9,1|10,1:61.3337:326.675,113.385:0.345543,0.345543:4.09213e-05,0.150859,0.849184
-chr1	8969424	.	TATATATATATATATATATATATATATATATATATATATA	TATATATATATATA	.	.	END=8969463;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00330237:7,7:1-7,1-7:0,6,0,0:NULL:NULL:59.7665:366.612,131.36:2.0456,2.0456:0.449076,0.48442,0.066672	0/0:6:0.174936:20,20:18-20,18-20:2,2,0,0:20,2:NULL:27.3013:326.675,113.385:0.744881,0.744881:0.00757335,0.50548,0.487012
-chr1	8969463	.	AGAGAGAGAGAGAGAGAGAGAGAG	AG	.	.	END=8969486;RU=ag;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00373898:1,1:1-8,1-8:0,6,0,0:NULL:NULL:60.4272:366.612,131.36:1.77987,1.77987:0.244967,0.559202,0.195847	0/0:14:0.922272:12,12:12-12,12-12:7,4,0,3:12,7:7,1|10,1|11,1:88.785:326.675,113.385:0.0,0.0:6.57346e-13,0.027556,0.972496
-chr1	8974355	.	CATCATCATCAT	CATCATCATCATCATCAT	.	.	END=8974366;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.000355263:6,6:6-6,6-6:0,1,0,0:NULL:NULL:10.2861:366.612,131.36:0.0,0.0:0.00265944,0.115218,0.882229	0/0:47:1.0:4,4:4-4,4-4:24,23,0,0:4,24:NULL:300.522:326.675,113.385:0.0,0.0:0.0,8.12535e-07,1.0
-chr1	8976339	.	TTATTATTATTA	TTATTATTATTATTA	.	.	END=8976350;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.838289:5,5:5-5,5-5:6,16,0,0:5,6:NULL:172.039:366.612,131.36:0.19802,0.19802:1.00381e-25,0.0844077,0.91569	0/0:35:0.999996:4,4:4-5,4-5:20,14,0,0:4,20:NULL:213.92:326.675,113.385:0.431574,0.431574:0.0,1.74031e-05,0.999986
-chr1	8976507	.	CCCACCCACCCA	.	.	.	END=8976518;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999913:3,3:3-3,3-3:16,12,0,0:3,16:NULL:177.625:366.612,131.36:0.0,0.0:0.0,5.45229e-05,0.999948	0/0:60:1.0:3,3:3-3,3-3:37,21,0,2:3,37:2,2:353.756:326.675,113.385:0.0,0.0:0.0,5.56012e-11,1.0
-chr1	8977413	.	AGGAGGAGGAGG	.	.	.	END=8977424;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:22,14,0,0:4,22:NULL:211.443:366.612,131.36:0.0,0.0:0.0,1.70713e-06,1.0	0/0:38:0.999979:4,4:4-4,4-4:18,18,0,2:4,18:3,2:251.578:326.675,113.385:0.0,0.0:0.0,1.51235e-05,0.999986
-chr1	8978639	.	AAAATTAAAATTAAAATT	AAAATT	.	.	END=8978656;RU=aaaatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:0.999948:3,3:3-3,3-3:17,12,0,0:3,17:NULL:178.649:326.675,113.385:0.0,0.0:0.0,4.79368e-05,0.999955
-chr1	8992158	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=8992189;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999219:8,8:7-8,7-8:13,14,0,11:8,13:2,2|4,3|5,3|7,3:262.314:366.612,131.36:0.311527,0.311527:1.92324e-35,0.000353678,0.999651	0/0:41:0.997771:8,8:8-8,8-8:12,21,0,8:8,12:3,1|4,1|6,4|7,2:299.467:326.675,113.385:0.0,0.0:4.40686e-32,0.00147235,0.998534
-chr1	8996946	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8996997;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.443872:26,26:24-31,24-31:4,15,0,9:26,4:5,2|13,2|17,1|18,1|20,1|23,1|24,1:225.953:366.612,131.36:2.41178,2.41178:8.45751e-06,0.180153,0.819909	1/2:18:0.250404:25,28:25-28,25-28:2,5,0,9:25,2:9,1|15,3|16,1|17,1|19,1|25,1|28,1:129.107:326.675,113.385:0.807523,0.960549:6.73269e-08,0.946104,0.053981
-chr1	8997017	.	TTTCTTTCTTTC	.	.	.	END=8997028;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999753:3,3:3-3,3-3:15,14,0,0:3,15:NULL:183.878:366.612,131.36:0.0,0.0:0.0,0.00015218,0.999849	0/0:18:0.999859:3,3:3-3,3-3:16,2,0,0:3,16:NULL:80.5162:326.675,113.385:0.0,0.0:0.0,6.20326e-05,0.999941
-chr1	9000049	.	ATGATGATGATG	.	.	.	END=9000060;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:35,14,0,3:4,35:3,3:288.249:366.612,131.36:0.0,0.0:0.0,7.66698e-11,1.0	0/0:41:1.0:4,4:4-4,4-4:24,15,0,2:4,24:3,2:250.432:326.675,113.385:0.0,0.0:0.0,4.66483e-07,1.0
-chr1	9000143	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=9000170;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:6,6:6-6,6-6:29,20,0,2:6,29:3,2:318.407:366.612,131.36:0.0,0.0:1.0,5.87949e-09,0.0	0/0:48:1.0:7,7:7-7,7-7:24,13,0,11:7,24:2,2|4,3|5,2|6,4:298.135:326.675,113.385:0.0,0.0:0.0,1.88854e-07,1.0
-chr1	9003159	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9003188;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0294368:12,12:12-18,12-18:0,7,0,2:NULL:6,1|12,1:79.4565:366.612,131.36:1.34033,1.34033:0.235741,0.502044,0.26226	0/0:19:0.9442:15,15:14-15,14-15:8,5,0,5:15,8:5,1|9,2|10,1|11,1:120.392:326.675,113.385:0.195027,0.195027:3.1254e-15,0.0284693,0.971582
-chr1	9003186	.	TCTATCTATCTATCTA	.	.	.	END=9003201;RU=tcta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.338585:4,4:1-4,1-4:3,6,0,0:4,3:NULL:67.7316:366.612,131.36:0.645921,0.645921:0.000190663,0.405217,0.594663	0/0:13:0.986866:4,4:4-4,4-4:10,3,0,0:4,10:NULL:68.9658:326.675,113.385:0.0,0.0:3.03064e-13,0.00828464,0.991734
-chr1	9007831	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9007856;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.468166:26,26:25-26,25-26:4,14,0,4:26,4:10,1|15,1|16,1|23,1:181.784:366.612,131.36:0.539944,0.539944:0.0,0.0,1.0	0/0:33:0.858364:13,13:12-14,12-14:21,8,0,4:12,5|13,14|14,2:9,1|11,2|12,1:214.993:326.675,113.385:0.560784,0.560784:4.82571e-17,0.137341,0.862749
-chr1	9008428	.	TATTTATTTATT	.	.	.	END=9008439;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:196.612:366.612,131.36:0.0,0.0:0.0,2.74101e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:193.865:326.675,113.385:0.0,0.0:0.0,2.09592e-07,1.0
-chr1	9010782	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATAT,ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9010839;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0877655:3,3:1-4,1-4:0,6,0,0:NULL:NULL:54.7806:366.612,131.36:1.06139,1.06139:1.0,0.0,0.0	2/2:6:0.0249467:22,22:22-25,22-25:0,3,0,2:NULL:5,1|19,1:40.9669:326.675,113.385:1.44541,1.44541:1.0,0.0,0.0
-chr1	9010840	.	ACACACACACACACAC	ACAC	.	.	END=9010855;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00198465:2,2:2-14,2-14:0,6,0,0:NULL:NULL:55.5589:366.612,131.36:5.27203,5.27203:0.0549711,0.404721,0.54048	0/0:5:0.392876:8,8:8-8,8-8:3,2,0,0:8,3:NULL:29.0822:326.675,113.385:0.0,0.0:3.84704e-09,0.321237,0.678776
-chr1	9012172	.	TATATATATATATATATATA	TATATATA	.	.	END=9012191;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00232879:4,4:1-7,1-7:0,6,0,0:NULL:NULL:53.2959:366.612,131.36:1.41352,1.41352:0.142922,0.527029,0.330191	0/0:14:0.886758:10,10:9-10,9-10:7,6,0,0:10,7:NULL:84.391:326.675,113.385:0.398507,0.398507:3.0459e-08,0.0742848,0.925809
-chr1	9015094	.	AAAGAAAGAAAG	.	.	.	END=9015105;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.988736:3,3:3-3,3-3:10,7,0,0:3,10:NULL:108.484:366.612,131.36:0.0,0.0:1.22412e-30,0.00610427,0.99391	0/0:35:0.99985:3,3:3-3,3-3:16,19,0,0:3,16:NULL:229.756:326.675,113.385:0.0,0.0:0.0,0.000113049,0.999888
-chr1	9015582	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9015617;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:48:0.879977:11,12:11-11,11-12:24,18,0,6:10,4|11,20:5,2|7,1|8,2|12,1:332.225:366.612,131.36:0.0,0.537944:1.0,0.0,0.0	0/0:42:0.840554:18,18:11-18,11-18:10,15,0,15:17,2|18,8:5,3|8,1|10,1|12,2|13,2|15,3|16,1|17,1|18,1:307.155:326.675,113.385:2.7477,2.7477:7.32886e-17,0.147725,0.852355
-chr1	9020212	.	GAATGAATGAATGAATGAATGAAT	GAATGAATGAAT,GAATGAATGAATGAAT	.	.	END=9020235;RU=gaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.946082:3,4:2-3,2-4:8,14,0,2:3,5|4,3:3,2:183.765:366.612,131.36:0.275098,0.776833:0.999713,0.000286357,8.49709e-27	0/0:23:0.999425:6,6:6-6,6-6:15,8,0,0:6,15:NULL:135.366:326.675,113.385:0.0,0.0:1.88457e-16,0.000431303,0.999569
-chr1	9021852	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9021905;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0340543:30,30:26-30,26-30:0,7,0,6:NULL:5,1|8,1|9,1|10,1|22,1|26,1:110.405:366.612,131.36:1.08568,1.08568:0.0470722,0.36094,0.592117	1/1:20:0.0477433:26,26:26-27,26-27:0,7,0,11:NULL:8,1|10,1|12,1|13,1|14,1|15,1|16,1|24,2|26,2:156.553:326.675,113.385:0.534653,0.534653:0.0916676,0.439076,0.469425
-chr1	9022665	.	TGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=9022689;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.149837:9,9:6-9,6-9:2,14,0,4:9,2:3,2|5,2:165.398:366.612,131.36:1.43267,1.43267:0.0,0.0,1.0	0/0:36:1.0:5,5:5-5,5-5:26,6,0,4:5,26:2,1|3,2|4,1:189.236:326.675,113.385:0.0,0.0:0.0,6.84067e-08,1.0
-chr1	9025967	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9026010;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.293938:25,25:25-26,25-26:3,10,0,8:25,3:7,1|8,1|11,1|13,1|15,1|20,1|21,1|24,1:172.892:366.612,131.36:0.590584,0.590584:0.0,0.0,1.0	0/0:31:0.84528:22,22:8-23,8-23:7,8,0,11:22,7:5,1|7,1|8,1|9,1|11,1|13,1|14,1|18,2|19,2:191.718:326.675,113.385:4.31912,4.31912:4.1625e-08,0.0753746,0.924719
-chr1	9027019	.	TTTATTTATTTA	TTTATTTATTTATTTA	.	.	END=9027030;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999559:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.767:366.612,131.36:0.0,0.0:1e-45,0.000217421,0.999787	0/0:17:0.985866:3,3:3-3,3-3:9,6,0,2:3,9:2,2:101.237:326.675,113.385:0.0,0.0:1.1158e-20,0.00535034,0.994663
-chr1	9029369	.	ATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9029380;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:3:0.000321662:27,57:14-77,14-76:0,3,0,0:NULL:NULL:26.0914:366.612,131.36:24.3716,23.0378:0.00111219,0.0825436,0.916443	0/0:31:0.994092:6,6:4-7,4-7:19,10,0,0:6,17|7,2:NULL:171.876:326.675,113.385:0.397522,0.397522:1.02527e-22,4.64167e-05,0.999956
-chr1	9029380	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9029417;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.216645:17,17:16-17,16-17:2,2,0,3:17,2:7,1|9,1|10,1:49.2363:366.612,131.36:0.607279,0.607279:0.765264,0.234492,0.000271143	0/0:46:0.977209:19,19:17-20,17-20:18,16,0,11:19,16|20,2:5,2|9,2|10,1|13,1|16,1|17,1|18,2|19,1:315.247:326.675,113.385:0.483833,0.483833:1.89571e-33,1.92268e-05,0.99998
-chr1	9029844	.	CAACAACAACAACAA	CAACAACAACAA	.	.	END=9029858;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.0:4,4:4-4,4-4:23,8,0,0:4,23:NULL:165.026:366.612,131.36:0.0,0.0:1.0,4.87866e-07,0.0	0/0:40:1.0:5,5:5-5,5-5:23,13,0,4:5,23:3,1|4,3:240.983:326.675,113.385:0.0,0.0:0.0,3.9763e-07,1.0
-chr1	9036620	.	TTGCTTGCTTGC	.	.	.	END=9036631;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:258.932:366.612,131.36:0.0,0.0:0.0,2.43865e-07,1.0	0/0:31:0.999979:3,3:3-3,3-3:18,11,0,2:3,18:2,2:189.103:326.675,113.385:0.0,0.0:0.0,1.8714e-05,0.999985
-chr1	9037227	.	TTGTTTGTTTGT	.	.	.	END=9037238;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.987905:3,3:3-3,3-3:10,26,0,0:3,10:NULL:281.733:366.612,131.36:0.0,0.0:6.40431e-34,0.00634645,0.993669	0/0:25:0.999784:3,3:3-3,3-3:15,8,0,2:3,15:2,2:141.515:326.675,113.385:0.0,0.0:0.0,9.43857e-05,0.999909
-chr1	9044406	.	TATATATATATA	.	.	.	END=9044417;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999311:6,6:6-6,6-6:14,14,0,0:6,14:NULL:185.079:366.612,131.36:0.0,0.0:6.79552e-31,0.000474014,0.999529	0/0:24:0.957473:6,6:6-6,6-6:9,15,0,0:6,9:NULL:171.372:326.675,113.385:0.0,0.0:1.20608e-19,0.0299865,0.970067
-chr1	9044826	.	CTTTTCTTTTCTTTTCTTTT	CTTTT	.	.	END=9044845;RU=ctttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:30:0.999993:4,4:4-4,4-4:19,9,0,2:4,19:3,2:174.322:326.675,113.385:0.0,0.0:0.0,1.1877e-05,0.999987
-chr1	9051415	.	TTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=9051434;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0162539:1,1:1-2,1-2:0,9,0,0:NULL:NULL:76.295:366.612,131.36:0.465241,0.465241:0.194826,0.531917,0.273329	0/0:40:1.0:5,5:5-5,5-5:30,10,0,0:5,30:NULL:213.903:326.675,113.385:0.0,0.0:0.0,7.71664e-09,1.0
-chr1	9052040	.	ATATATATATATAT	ATATATATATAT	.	.	END=9052053;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998463:6,6:6-6,6-6:13,23,0,0:6,13:NULL:267.562:366.612,131.36:0.0,0.0:0.999553,0.000449969,6.37458e-27	0/0:14:0.974584:7,7:7-7,7-7:9,5,0,0:7,9:NULL:79.1573:326.675,113.385:0.0,0.0:2.30478e-15,0.0141506,0.985881
-chr1	9054350	.	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	.	.	END=9054388;RU=gtg;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:0.999893:11,11:11-11,11-11:18,30,0,12:11,18:4,2|5,1|6,1|7,1|8,4|10,3:444.343:366.612,131.36:0.0990099,0.0990099:0.999963,4.02213e-05,2.23574e-35	0/0:43:0.97978:13,13:12-13,12-13:17,17,0,9:12,2|13,15:3,2|4,2|5,1|6,1|8,1|9,2:304.92:326.675,113.385:0.334882,0.334882:9.55963e-30,0.0202098,0.979833
-chr1	9055550	.	GAGAGAGAGAGA	.	.	.	END=9055561;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999743:6,6:6-6,6-6:15,12,0,0:6,15:NULL:169.215:366.612,131.36:0.0,0.0:1.53773e-33,0.0001457,0.999857	0/0:23:0.999908:6,6:6-6,6-6:17,6,0,0:6,17:NULL:124.175:326.675,113.385:0.0,0.0:2.18165e-37,5.48361e-05,0.999948
-chr1	9057035	.	ACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9057070;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.697452:25,25:25-25,25-25:5,15,0,7:25,5:10,1|12,1|13,2|14,1|16,1|23,1:220.418:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:36:0.897055:18,18:17-18,17-18:12,10,0,14:17,3|18,9:5,2|7,1|8,1|9,1|10,2|11,1|13,2|14,1|15,1|16,1|17,1:260.454:326.675,113.385:0.345543,0.345543:3.99221e-10,0.0980294,0.902074
-chr1	9065820	.	ACCCACCCACCC	.	.	.	END=9065831;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.721236:3,3:1-3,1-3:5,20,0,0:3,5:NULL:206.575:366.612,131.36:0.647134,0.647134:1.95027e-15,0.215081,0.784963	0/0:30:0.977326:3,3:3-3,3-3:9,21,0,0:3,9:NULL:225.439:326.675,113.385:0.0,0.0:8.67199e-27,0.0162112,0.983822
-chr1	9066850	.	TTGTTGTTGTTG	.	.	.	END=9066861;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999984:4,4:4-4,4-4:18,12,0,0:4,18:NULL:188.271:366.612,131.36:0.0,0.0:0.0,2.54679e-05,0.999978	0/0:34:0.99999:4,4:4-4,4-4:18,13,0,3:4,18:3,3:216.888:326.675,113.385:0.0,0.0:0.0,1.61757e-05,0.999986
-chr1	9077038	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=9077077;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.290493:11,15:11-11,11-16:14,10,0,10:10,2|11,12:6,2|7,2|8,2|9,1|11,1|12,1|14,1:248.852:366.612,131.36:0.0,1.72902:1.0,0.0,0.0	3/0:41:0.992087:19,20:19-22,20-20:15,9,0,16:19,7|20,8:4,2|5,2|10,2|11,1|13,1|14,2|16,2|17,1|18,2|19,1:283.071:326.675,113.385:0.914864,0.19802:3.63782e-08,0.992064,0.0079529
-chr1	9080272	.	AAAGGAAAAGGAAAAGGA	.	.	.	END=9080289;RU=aaagga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:206.352:366.612,131.36:0.0,0.0:0.0,5.27149e-06,0.999995	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:167.245:326.675,113.385:0.0,0.0:0.0,1.10308e-07,1.0
-chr1	9093163	.	CAACAACAACAA	.	.	.	END=9093174;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:27,10,0,0:4,27:NULL:201.787:366.612,131.36:0.0,0.0:0.0,6.24979e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:23,7,0,2:4,23:3,2:169.731:326.675,113.385:0.0,0.0:0.0,4.45989e-07,1.0
-chr1	9101067	.	TAAATAAATAAA	.	.	.	END=9101078;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:26,18,0,2:3,26:2,2:283.387:366.612,131.36:0.0,0.0:0.0,6.84041e-08,1.0	0/0:33:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:202.305:326.675,113.385:0.0,0.0:0.0,1.23536e-05,0.999987
-chr1	9101909	.	GATGGATGGATGGATGGATGGATGGATGGATGGATGGATG	.	.	.	END=9101948;RU=gatg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.909487:10,10:10-10,10-10:7,11,0,2:10,7:5,1|8,1:150.22:366.612,131.36:0.0,0.0:1.72265e-19,0.06029,0.9398	0/0:37:0.999347:10,10:6-10,6-10:14,12,0,10:10,14:4,3|5,2|6,1|8,2|9,2:243.867:326.675,113.385:1.80969,1.80969:3.52163e-38,0.00031278,0.999689
-chr1	9101975	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	END=9102022;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.998561:11,11:10-11,10-11:13,13,0,12:11,13:4,1|6,2|8,1|9,2|10,6:266.263:366.612,131.36:0.323567,0.323567:0.999219,0.000782351,4.25651e-20	0/0:43:0.999885:12,12:12-12,12-12:17,13,0,12:12,17:2,1|3,1|4,2|5,1|6,1|7,2|8,2|11,2:282.169:326.675,113.385:0.139319,0.139319:1.82656e-35,6.6536e-05,0.999934
-chr1	9103931	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9103958;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.848607:19,19:17-20,17-20:14,13,0,15:19,12|20,2:5,1|7,2|8,1|9,1|13,1|14,1|15,2|16,4|18,2:305.51:366.612,131.36:0.586587,0.586587:0.0,0.0,1.0	0/0:33:0.9842:14,14:12-14,12-14:10,10,0,12:14,10:4,1|5,4|6,4|9,1|11,1|13,1:235.664:326.675,113.385:0.765392,0.765392:4.05923e-13,0.0066438,0.99337
-chr1	9104117	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=9104156;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.99989:9,9:9-9,9-9:16,11,0,7:9,16:2,1|3,1|4,1|5,1|7,1|8,2:220.223:366.612,131.36:0.0,0.0:0.0,2.07957e-05,0.999979	0/0:37:0.999927:8,8:8-8,8-8:17,14,0,6:8,17:3,3|4,2|6,1:241.36:326.675,113.385:0.0,0.0:0.0,6.51563e-05,0.999934
-chr1	9108162	.	AATCAATCAATCAATC	.	.	.	END=9108177;RU=aatc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:179.28:366.612,131.36:0.0,0.0:0.0,7.04389e-06,0.999994	0/0:41:1.00001:4,4:4-4,4-4:22,14,0,5:4,22:2,1|3,4:248.72:326.675,113.385:0.0,0.0:0.0,9.11744e-07,1.0
-chr1	9118041	.	TTTATTTATTTA	.	.	.	END=9118052;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.997525:3,3:3-3,3-3:13,17,0,0:3,13:NULL:208.579:366.612,131.36:0.0,0.0:3.4895e-41,0.00174604,0.998261	0/0:23:1.0:3,3:3-3,3-3:19,2,0,2:3,19:2,2:106.128:326.675,113.385:0.0,0.0:0.0,5.02187e-06,0.999995
-chr1	9118141	.	CCCACCCACCCACCCACCCACCCA	.	.	.	END=9118164;RU=ccca;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.964596:6,6:6-6,6-6:8,10,0,4:6,8:3,1|4,1|5,2:153.156:366.612,131.36:0.0,0.0:1.70703e-22,0.0190878,0.980953	0/0:19:0.969243:6,6:6-6,6-6:8,4,0,7:6,8:2,1|3,3|5,3:117.826:326.675,113.385:0.0,0.0:7.17771e-23,0.0105606,0.989462
-chr1	9127223	.	TATATATATATATATA	.	.	.	END=9127238;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999925:8,8:8-8,8-8:18,9,0,0:8,18:NULL:156.836:366.612,131.36:0.0990099,0.0990099:1.19149e-23,4.76761e-05,0.999955	0/0:22:0.66523:8,8:8-8,8-8:5,17,0,0:8,5:NULL:181.379:326.675,113.385:0.0,0.0:3.98815e-07,0.190437,0.809619
-chr1	9130256	.	CATCATCATCATCAT	.	.	.	END=9130270;RU=cat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999986:5,5:5-5,5-5:18,11,0,0:5,18:NULL:173.323:366.612,131.36:0.0,0.0:0.0,2.12812e-05,0.999979	0/0:43:1.0:5,5:5-5,5-5:25,14,0,4:5,25:3,1|4,3:257.681:326.675,113.385:0.0,0.0:0.0,6.90025e-08,1.0
-chr1	9131824	.	TAAATAAATAAA	.	.	.	END=9131835;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999531:3,3:3-3,3-3:14,15,0,0:3,14:NULL:188.824:366.612,131.36:0.0,0.0:0.0,0.000294935,0.999706	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.923:326.675,113.385:0.0,0.0:0.0,3.12728e-06,1.0
-chr1	9133465	.	AAGCAAGCAAGC	AAGCAAGC	.	.	END=9133476;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999676:2,2:2-2,2-2:15,10,0,0:2,15:NULL:151.462:366.612,131.36:0.0,0.0:0.999812,0.000188883,2.7e-43	0/0:32:0.999907:3,3:3-3,3-3:17,15,0,0:3,17:NULL:200.299:326.675,113.385:0.0,0.0:0.0,6.32466e-05,0.99994
-chr1	9142553	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9142586;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0344154:35,35:4-38,4-38:0,11,0,9:NULL:14,1|18,2|22,1|23,1|32,2|35,2:177.59:366.612,131.36:8.20969,8.20969:0.0,0.0698149,0.930281	0/0:40:0.325667:17,17:16-20,16-20:25,6,0,8:16,6|17,19:5,1|6,1|7,1|10,1|11,1|12,1|15,1|20,1:259.707:326.675,113.385:1.49914,1.49914:9.32892e-22,0.0031623,0.996845
-chr1	9143268	.	AATAAATAAATA	.	.	.	END=9143279;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.988991:3,3:3-3,3-3:10,13,0,0:3,10:NULL:156.669:366.612,131.36:0.0,0.0:1.49166e-29,0.00640972,0.993603	0/0:40:1.0:3,3:3-3,3-3:19,17,0,4:3,19:2,4:255.414:326.675,113.385:0.0,0.0:0.0,6.32514e-06,0.999994
-chr1	9154316	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9154355;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.88495:17,17:16-18,16-18:19,19,0,9:16,5|17,12|18,2:6,2|7,1|8,1|9,1|11,1|12,1|14,1|17,1:345.099:366.612,131.36:0.575792,0.575792:0.999988,1.14857e-05,1.63775e-36	0/2:35:0.272305:20,37:20-20,19-39:15,8,0,11:19,2|20,13:7,1|10,2|12,2|14,1|15,1|17,1|19,2|36,1:242.669:326.675,113.385:0.0990099,8.55464:2.43813e-16,1.05788e-05,0.999993
-chr1	9155619	.	ATAAATAAATAA	.	.	.	END=9155630;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999851:3,3:3-3,3-3:16,12,0,0:3,16:NULL:169.846:366.612,131.36:0.0,0.0:1.05e-43,8.45388e-05,0.999918	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:138.642:326.675,113.385:0.0,0.0:0.0,4.30834e-06,0.999995
-chr1	9156170	.	TTTGTTTGTTTG	.	.	.	END=9156181;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999834:3,3:2-3,2-3:16,5,0,0:3,16:NULL:107.347:366.612,131.36:0.345543,0.345543:0.0,8.75503e-05,0.999917	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:175.6:326.675,113.385:0.0,0.0:0.0,4.95853e-06,0.999995
-chr1	9156695	.	GATGATGATGATGATGAT	.	.	.	END=9156712;RU=gat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999953:6,6:5-6,5-6:18,25,0,5:6,18:4,2|5,3:340.272:366.612,131.36:0.236383,0.236383:1.4e-44,1.58438e-05,0.999986	0/0:36:0.999722:6,6:6-6,6-6:15,16,0,5:6,15:3,1|4,2|5,2:250.053:326.675,113.385:0.0,0.0:4.94222e-37,0.000153961,0.999849
-chr1	9157471	.	TGGTTGGTTGGTTGGTTGGTTGGT	.	.	.	END=9157494;RU=tggt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:6,6:6-6,6-6:19,16,0,6:6,19:2,1|3,2|4,1|5,2:269.107:366.612,131.36:0.0,0.0:0.0,8.59828e-06,0.999994	0/0:41:0.999594:6,6:5-6,5-6:14,19,0,7:6,14:3,1|4,5|5,1:286.031:326.675,113.385:0.334882,0.334882:0.0,0.000298026,0.999705
-chr1	9158960	.	AACAACAACAACAAC	AACAACAACAACAACAACAAC	.	.	END=9158974;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.987689:7,7:7-7,7-7:10,17,0,6:7,10:3,1|4,2|5,1|6,2:247.771:366.612,131.36:0.29703,0.29703:0.0,0.00145246,0.998551	0/0:27:1.0:5,5:5-5,5-5:19,6,0,2:5,19:4,2:146.829:326.675,113.385:0.0,0.0:0.0,7.46421e-06,0.999994
-chr1	9164239	.	CAACAACAACAA	.	.	.	END=9164250;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.984929:4,4:4-4,4-4:10,22,0,0:4,10:NULL:242.204:366.612,131.36:0.0,0.0:2.12531e-29,0.0121012,0.987928	0/0:39:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:226.222:326.675,113.385:0.0,0.0:0.0,5.94517e-07,1.0
-chr1	9167899	.	AACAAAAACAAAAACAAA	.	.	.	END=9167916;RU=aacaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999676:3,3:3-3,3-3:15,14,0,2:3,15:2,1|3,1:208.483:366.612,131.36:0.0,0.0:0.0,0.000197021,0.999804	0/0:18:0.997682:3,3:3-3,3-3:12,6,0,0:3,12:NULL:107.052:326.675,113.385:0.0,0.0:4.81654e-40,0.00123496,0.99877
-chr1	9168809	.	TGGTGGTGGTGG	.	.	.	END=9168820;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,22,0,0:4,28:NULL:321.123:366.612,131.36:0.0,0.0:0.0,3.43302e-08,1.0	0/0:39:1.00001:4,4:4-4,4-4:21,16,0,2:4,21:3,2:240.021:326.675,113.385:0.0,0.0:0.0,1.95118e-06,1.0
-chr1	9174269	.	AAAATAAAATAAAAT	.	.	.	END=9174283;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998659:3,3:3-3,3-3:13,8,0,0:3,13:NULL:121.529:366.612,131.36:0.0,0.0:4.34e-43,0.000804771,0.999197	0/0:23:0.999924:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.148:326.675,113.385:0.0,0.0:0.0,4.24173e-05,0.999957
-chr1	9185149	.	AAATAAATAAAT	.	.	.	END=9185160;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:188.035:366.612,131.36:0.0,0.0:0.0,1.60488e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:200.239:326.675,113.385:0.0,0.0:0.0,3.84078e-08,1.0
-chr1	9190774	.	TGTTTGTTTGTT	.	.	.	END=9190785;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998971:3,3:3-3,3-3:13,8,0,0:3,13:NULL:126.822:366.612,131.36:0.0,0.0:3.9e-44,0.000613067,0.999392	0/0:28:0.999996:3,3:3-3,3-3:18,7,0,3:3,18:2,3:155.211:326.675,113.385:0.0,0.0:0.0,1.06511e-05,0.999993
-chr1	9192850	.	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG,AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	.	.	END=9192944;RU=aaagg;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0708864:15,15:12-16,12-16:0,10,0,12:NULL:3,1|5,1|6,1|7,2|8,1|9,1|11,1|12,1|13,2|14,1:174.677:366.612,131.36:1.04623,1.04623:1.0,0.0,0.0	2/2:36:0.634562:17,17:9-17,9-17:4,14,0,17:17,4:2,1|5,1|6,2|8,1|9,2|11,1|13,3|14,1|15,3|16,2:270.043:326.675,113.385:3.99824,3.99824:0.88729,0.11281,2.86131e-10
-chr1	9198920	.	ATCCATCCATCC	.	.	.	END=9198931;RU=atcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:20,11,0,2:3,20:2,2:195.498:366.612,131.36:0.0,0.0:0.0,2.88559e-06,1.0	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:247.93:326.675,113.385:0.0,0.0:0.0,1.34858e-07,1.0
-chr1	9200129	.	TTTATTTATTTA	.	.	.	END=9200140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:209.886:366.612,131.36:0.0,0.0:0.0,9.18779e-06,0.999993	0/0:44:1.0:3,3:3-3,3-3:36,6,0,2:3,36:2,2:212.001:326.675,113.385:0.0,0.0:0.0,4.11194e-11,1.0
-chr1	9201395	.	TATATATATATATATATATATATATATATATATATATATA	TATATA	.	.	END=9201434;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00226727:3,3:21-24,21-24:0,2,0,0:NULL:NULL:17.2916:366.612,131.36:1.13521,1.13521:0.516699,0.405381,0.0780363	0/0:9:0.134691:20,20:19-22,19-22:2,4,0,0:20,2:NULL:51.6454:326.675,113.385:0.765776,0.765776:0.00662868,0.410622,0.58284
-chr1	9203282	.	AGTCAGTCAGTC	.	.	.	END=9203293;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:19,15,0,2:3,19:2,2:229.987:366.612,131.36:0.0,0.0:0.0,5.45693e-06,0.999995	0/0:40:1.00001:3,3:3-3,3-3:20,15,0,5:3,20:2,5:257.356:326.675,113.385:0.0,0.0:0.0,3.54959e-06,1.0
-chr1	9204564	.	TCATCATCATCA	.	.	.	END=9204575;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:217.629:366.612,131.36:0.0,0.0:0.0,2.91543e-07,1.0	0/0:31:0.999999:4,4:4-4,4-4:18,8,0,5:4,18:3,5:181.185:326.675,113.385:0.0,0.0:0.0,8.05792e-06,0.999994
-chr1	9211529	.	CAAAACAAAACAAAA	.	.	.	END=9211543;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:2-3,2-3:21,12,0,2:3,21:2,2:212.916:366.612,131.36:0.374147,0.374147:0.0,2.66644e-06,1.0	0/0:26:0.999935:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.809:326.675,113.385:0.0,0.0:0.0,4.89388e-05,0.999955
-chr1	9211779	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACAC	.	.	END=9211816;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.913569:14,14:13-14,13-14:11,9,0,15:13,2|14,9:4,1|5,1|6,2|7,1|9,1|10,2|11,4|12,2|13,1:254.655:366.612,131.36:0.345543,0.345543:1.0,0.0,0.0	0/0:29:0.814705:19,19:18-20,18-20:6,12,0,9:19,6:6,1|7,2|14,1|15,1|16,2|18,2:206.507:326.675,113.385:0.55233,0.55233:1.1296e-08,0.0586354,0.941447
-chr1	9216945	.	GAGGGAGGGAGG	.	.	.	END=9216956;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:247.435:366.612,131.36:0.0,0.0:0.0,4.13697e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:193.378:326.675,113.385:0.0,0.0:0.0,3.34687e-06,1.0
-chr1	9218068	.	AATTAATTAATT	.	.	.	END=9218079;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.995878:3,3:3-3,3-3:11,8,0,0:3,11:NULL:117.08:366.612,131.36:0.0,0.0:4.43428e-34,0.00242352,0.997586	0/0:24:0.999921:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.889:326.675,113.385:0.0,0.0:0.0,4.7444e-05,0.999955
-chr1	9225255	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	END=9225306;RU=gaaa;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:33:0.999997:13,14:13-14,14-14:12,13,0,8:13,5|14,7:4,1|6,2|8,2|11,2|12,1:234.093:366.612,131.36:0.169767,0.0:1.91211e-24,1.68997e-08,1.0	0/0:33:0.838936:13,13:5-13,5-13:6,14,0,12:13,6:2,1|3,1|4,2|6,1|8,1|9,1|10,3|11,1|12,1:248.732:326.675,113.385:4.05346,4.05346:4.40474e-13,0.112307,0.88779
-chr1	9226135	.	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATA,ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9226188;RU=ata;PERIOD=3;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.998211:10,10:9-11,9-11:13,24,0,9:10,13:3,2|6,1|7,3|8,1|9,2:335.221:366.612,131.36:0.312156,0.312156:1.0,0.0,0.0	2/0:22:0.990369:17,18:16-18,16-18:7,5,0,9:17,3|18,4:4,1|5,1|7,3|8,1|9,1|14,1|16,1:147.675:326.675,113.385:0.480988,0.363786:6.80332e-05,0.991309,0.00864358
-chr1	9227593	.	TGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9227613;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.967829:7,7:7-7,7-7:8,9,0,3:7,8:5,1|6,2:136.638:366.612,131.36:0.0,0.0:4.71476e-15,0.00994836,0.990074	0/0:18:0.996976:7,7:6-7,6-7:12,3,0,2:7,12:5,1|6,1:91.0383:326.675,113.385:0.236383,0.236383:7.79232e-22,0.00126966,0.998733
-chr1	9227617	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=9227655;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.953525:13,13:13-13,13-13:8,9,0,4:13,8:6,1|9,1|10,1|12,1:147.325:366.612,131.36:0.0,0.0:7.76344e-13,0.0174828,0.982554	0/0:24:0.945038:13,13:12-13,12-13:8,7,0,8:13,8:3,3|5,1|6,2|7,1|11,1:156.105:326.675,113.385:0.298675,0.298675:1.16214e-12,0.0303655,0.969693
-chr1	9229745	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9229764;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.997521:5,5:5-5,5-5:12,14,0,6:5,12:2,1|3,4|4,1:219.47:366.612,131.36:0.0,0.0:9.983e-42,0.00150345,0.998503	0/0:35:1.00001:5,5:5-5,5-5:21,11,0,3:5,21:3,1|4,2:208.109:326.675,113.385:0.0,0.0:0.0,2.10188e-06,1.0
-chr1	9235751	.	TCTGATGTCTGTGTTCTGATGTCTGTGTTCTGATGTCTGTGT	.	.	.	END=9235792;RU=tctgatgtctgtgt;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.995393:3,3:3-3,3-3:15,24,0,0:3,15:NULL:287.148:366.612,131.36:0.0,0.0:1.91692e-17,0.00460891,0.995402	0/0:26:0.801702:3,3:1-3,1-3:8,18,0,0:3,8:NULL:202.589:326.675,113.385:0.569802,0.569802:1.96275e-09,0.194535,0.805516
-chr1	9247060	.	GGGTGGGTGGGT	.	.	.	END=9247071;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.828891:3,3:3-3,3-3:6,23,0,0:3,6:NULL:223.101:366.612,131.36:0.19802,0.19802:2.50678e-18,0.110301,0.889796	0/0:23:0.959299:3,3:3-3,3-3:8,15,0,0:3,8:NULL:165.037:326.675,113.385:0.0,0.0:1.89467e-24,0.0252493,0.9748
-chr1	9251161	.	AAATAAATAAAT	.	.	.	END=9251172;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997824:3,3:3-3,3-3:13,21,0,0:3,13:NULL:250.863:366.612,131.36:0.0,0.0:1.0388e-41,0.00169011,0.998315	0/0:26:0.999524:3,3:3-3,3-3:14,12,0,0:3,14:NULL:160.371:326.675,113.385:0.0,0.0:1e-45,0.000271586,0.999729
-chr1	9252401	.	AGAGAGAGAGAG	.	.	.	END=9252412;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999986:6,6:6-6,6-6:19,25,0,5:6,19:4,3|5,2:348.615:366.612,131.36:0.0,0.0:0.0,9.15573e-06,0.999993	0/0:37:1.0:6,6:6-6,6-6:24,13,0,0:6,24:NULL:213.251:326.675,113.385:0.0,0.0:0.0,5.19551e-07,1.0
-chr1	9253812	.	TAAATAAATAAA	.	.	.	END=9253823;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:216.651:366.612,131.36:0.0,0.0:0.0,5.9982e-06,0.999995	0/0:28:1.0:3,3:3-3,3-3:24,4,0,0:3,24:NULL:130.617:326.675,113.385:0.0,0.0:0.0,2.63531e-07,1.0
-chr1	9257431	.	AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAG	AGACAGAGACAGAGACAGAGACAG	.	.	END=9257472;RU=agacag;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999995:4,4:4-4,4-4:19,18,0,4:4,19:2,3|3,1:271.847:366.612,131.36:0.0,0.0:1.0,8.86764e-07,0.0	0/0:44:0.999974:7,7:7-7,7-7:18,16,0,10:7,18:4,6|6,4:297.01:326.675,113.385:0.0,0.0:0.0,2.37702e-05,0.999979
-chr1	9258341	.	CTTCCTTCCTTCCTTC	.	.	.	END=9258356;RU=cttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:24,17,0,0:4,24:NULL:255.707:366.612,131.36:0.0,0.0:0.0,1.40646e-06,1.0	0/0:47:1.0:4,4:4-4,4-4:25,22,0,0:4,25:NULL:303.27:326.675,113.385:0.0,0.0:0.0,5.21673e-07,1.0
-chr1	9260912	.	AAGAAAAGAAAAGAA	.	.	.	END=9260926;RU=aagaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,12,0,0:3,30:NULL:231.624:366.612,131.36:0.0,0.0:0.0,3.85823e-09,1.0	0/0:29:1.0:3,3:3-3,3-3:25,4,0,0:3,25:NULL:137.727:326.675,113.385:0.0,0.0:0.0,1.41967e-07,1.0
-chr1	9273522	.	TTGATTGATTGATTGATTGATTGATTGA	.	.	.	END=9273549;RU=ttga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:7,7:7-7,7-7:36,23,0,7:7,36:2,3|5,3|6,1:408.576:366.612,131.36:0.0,0.0:0.0,1.05388e-10,1.0	0/0:63:1.0:7,7:7-7,7-7:34,21,0,7:7,34:2,2|3,3|5,1|6,1:399.62:326.675,113.385:0.0,0.0:0.0,1.36727e-09,1.0
-chr1	9274125	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9274170;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:49:0.28917:18,28:18-18,18-30:17,16,0,14:17,2|18,15:5,1|6,1|7,1|9,2|10,2|13,1|15,2|16,1|17,2|28,1:348.667:366.612,131.36:0.0,5.02939:0.00361416,0.996398,7e-45	2/0:44:0.956737:22,23:19-23,23-23:15,14,0,14:21,2|22,5|23,8:5,1|8,2|9,2|10,1|12,1|13,1|16,5|21,1:320.63:326.675,113.385:0.899847,0.39604:5.11288e-07,0.96099,0.0390799
-chr1	9277902	.	ATATATATATATATAT	.	.	.	END=9277917;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.988758:8,8:8-9,8-9:11,11,0,0:8,11:NULL:149.074:366.612,131.36:0.253975,0.253975:2.95112e-15,0.00717039,0.992844	0/0:21:0.999429:8,8:8-8,8-8:15,5,0,0:8,15:NULL:105.87:326.675,113.385:0.0,0.0:8.80438e-21,0.000358104,0.999644
-chr1	9279853	.	ATACATACATACATAC	.	.	.	END=9279868;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:23,18,0,2:4,23:3,2:269.686:366.612,131.36:0.0,0.0:0.0,7.3893e-07,1.0	0/0:38:1.00001:4,4:4-4,4-4:22,12,0,4:4,22:2,2|3,2:224.55:326.675,113.385:0.0,0.0:0.0,8.97549e-07,1.0
-chr1	9281951	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9281994;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.838921:21,21:20-21,20-21:7,10,0,11:21,7:5,1|7,1|10,3|12,1|13,1|14,1|16,2|18,1:207.014:366.612,131.36:0.253975,0.253975:0.911248,0.0888383,1.37494e-05	0/0:43:0.998108:22,22:22-22,22-22:14,11,0,18:22,14:6,1|8,1|9,3|11,2|13,1|14,1|15,2|18,1|19,2|20,2|21,2:309.278:326.675,113.385:0.0,0.0:1.38778e-17,0.000334466,0.999667
-chr1	9282129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9282164;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.276294:24,27:23-25,23-27:5,15,0,15:23,2|24,3:5,1|6,1|9,1|10,1|12,1|15,3|16,1|17,1|18,1|23,3|26,1:284.08:366.612,131.36:0.459943,1.26972:0.0,0.0,1.0	0/0:41:0.989568:18,18:17-18,17-18:19,12,0,8:17,4|18,15:4,1|6,1|9,1|10,1|14,1|16,1|17,1|18,1:261.136:326.675,113.385:0.290354,0.290354:1.77746e-23,0.0103277,0.989694
-chr1	9285357	.	TTTATTTATTTA	.	.	.	END=9285368;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:232.842:366.612,131.36:0.0,0.0:0.0,4.84406e-06,0.999995	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.413:326.675,113.385:0.0,0.0:0.0,4.26591e-06,0.999995
-chr1	9286427	.	TTTTATTTTATTTTA	.	.	.	END=9286441;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:20,15,0,2:3,20:2,2:228.55:366.612,131.36:0.0,0.0:0.0,3.13928e-06,1.0	0/0:21:0.989896:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.98:326.675,113.385:0.0,0.0:1.23609e-32,0.00643952,0.993578
-chr1	9289377	.	TATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=9289400;RU=tatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999907:9,9:1-9,1-9:16,18,0,14:9,16:3,1|5,3|6,3|7,3|8,4:326.474:366.612,131.36:3.40502,3.40502:0.0,1.19741e-07,1.0	0/0:20:0.997387:6,6:6-6,6-6:12,4,0,4:6,12:3,2|4,1|5,1:114.495:326.675,113.385:0.0,0.0:1.98832e-30,0.00113359,0.998869
-chr1	9290815	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9290852;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:0.967706:19,19:18-19,18-19:15,18,0,13:18,3|19,12:5,1|8,1|9,1|10,2|11,1|13,3|15,1|16,1|17,1|18,1:340.356:366.612,131.36:0.399735,0.399735:1.49956e-12,0.0314958,0.968563	0/0:25:0.655712:19,19:11-20,11-20:5,9,0,8:19,5:5,2|7,1|12,1|14,1|15,1|18,2:166.296:326.675,113.385:3.94512,3.94512:1.10631e-06,0.124407,0.875694
-chr1	9296627	.	ATTAATTAATTA	.	.	.	END=9296638;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999935:3,3:3-3,3-3:16,12,0,3:3,16:2,3:190.493:366.612,131.36:0.0,0.0:0.0,3.03256e-05,0.999971	0/0:43:1.00001:3,3:3-3,3-3:21,19,0,3:3,21:2,3:278.445:326.675,113.385:0.0,0.0:0.0,1.42207e-06,1.0
-chr1	9296985	.	AAAGAAAGAAAG	.	.	.	END=9296996;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:240.218:366.612,131.36:0.0,0.0:0.0,2.7802e-07,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:190.06:326.675,113.385:0.0,0.0:0.0,6.452e-07,1.0
-chr1	9301041	.	TAAATAAATAAA	.	.	.	END=9301052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.992895:3,3:3-3,3-3:10,11,0,0:3,10:NULL:142.384:366.612,131.36:0.0,0.0:4.71169e-33,0.0039423,0.996067	0/0:28:0.999938:3,3:3-3,3-3:17,9,0,2:3,17:2,2:162.806:326.675,113.385:0.0,0.0:0.0,2.85568e-05,0.999972
-chr1	9302120	.	CACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACA	.	.	END=9302159;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.938087:18,19:16-19,18-20:10,23,0,10:18,5|19,5:7,1|8,1|11,1|13,1|15,1|16,3|18,1|19,1:334.803:366.612,131.36:0.667418,0.371782:0.997883,0.00212291,4.80765e-08	0/0:49:0.990551:20,20:19-20,19-20:14,18,0,15:19,2|20,12:8,2|10,1|12,2|14,1|15,1|16,4|18,2|19,1|20,1:349.293:326.675,113.385:0.390054,0.390054:4.34398e-19,0.00830726,0.991711
-chr1	9302309	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9302354;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.993142:19,19:18-19,18-19:20,16,0,8:18,3|19,17:6,1|7,1|8,1|10,1|12,1|15,1|16,1|18,1:304.203:366.612,131.36:0.275098,0.275098:1.0,0.0,0.0	0/2:49:0.303115:23,38:23-23,2-39:13,15,0,18:21,2|23,9|24,2:6,1|7,1|8,1|9,1|10,1|12,2|14,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|32,1|38,1:361.606:326.675,113.385:0.243733,12.4842:8.54821e-26,9.88519e-09,1.0
-chr1	9307495	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA,TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=9307558;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.84055:17,17:16-17,16-17:6,12,0,10:17,6:3,1|5,1|6,1|8,1|13,2|14,2|15,2:211.044:366.612,131.36:0.425627,0.425627:3.8558e-15,0.0676248,0.93247	1/1:36:0.997979:15,15:14-15,14-15:13,9,0,13:15,13:5,1|7,1|8,3|9,3|10,2|13,2|14,1:237.268:326.675,113.385:0.253975,0.253975:0.998922,0.00108148,1.56142e-16
-chr1	9310514	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9310563;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.486569:25,25:22-26,22-26:11,10,0,19:24,2|25,7|26,2:8,1|9,2|11,4|13,1|14,1|16,1|17,1|18,1|19,1|20,1|22,1|23,2|24,2:299.975:366.612,131.36:1.02923,1.02923:2.07079e-08,0.0369271,0.963139	0/1:31:0.298027:25,35:24-25,24-35:8,11,0,12:24,2|25,6:5,1|9,2|10,1|11,1|12,1|13,1|15,1|20,1|23,1|24,1|34,1:247.892:326.675,113.385:0.169767,4.95744:5.61813e-11,1.06178e-05,0.999993
-chr1	9314806	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9314831;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:39:0.768871:23,24:23-24,24-24:9,13,0,17:23,3|24,6:4,1|5,1|6,2|7,1|9,2|10,2|11,3|16,2|17,1|19,1|20,1:301.593:366.612,131.36:0.499975,0.0:0.0,0.0,1.0	0/1:47:0.856598:13,14:13-13,13-14:22,15,0,10:12,3|13,19:4,1|5,2|6,1|8,1|9,1|11,2|12,1|14,1:329.622:326.675,113.385:0.0,0.515422:7.72604e-23,7.13848e-06,0.999994
-chr1	9318491	.	TATATATATATATA	.	.	.	END=9318504;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:7,7:7-7,7-7:26,17,0,0:7,26:NULL:263.698:366.612,131.36:0.0,0.0:5.19875e-33,2.97156e-07,1.0	0/0:20:0.998886:7,7:6-7,6-7:14,5,0,0:7,14:NULL:101.696:326.675,113.385:0.323567,0.323567:2.86529e-18,0.000686551,0.999317
-chr1	9324727	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=9324744;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99986:3,3:3-3,3-3:17,12,0,0:3,17:NULL:185.029:366.612,131.36:0.0,0.0:0.0,0.000120491,0.99988	0/0:18:0.996535:3,3:3-3,3-3:11,5,0,2:3,11:2,2:100.743:326.675,113.385:0.0,0.0:3.86184e-38,0.00153338,0.998473
-chr1	9326142	.	TCCCTCCCTCCC	.	.	.	END=9326153;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:26,28,0,0:3,26:NULL:358.283:366.612,131.36:0.0,0.0:0.0,3.30543e-07,1.0	0/0:34:0.999349:3,3:3-3,3-3:14,20,0,0:3,14:NULL:244.48:326.675,113.385:0.0,0.0:0.0,0.000523905,0.999477
-chr1	9328079	.	AAACAAACAAAC	.	.	.	END=9328090;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:24,4,0,2:3,24:2,2:148.846:366.612,131.36:0.0,0.0:0.0,1.27146e-07,1.0	0/0:68:1.0:3,3:3-3,3-3:44,21,0,2:3,44:2,2:371.366:326.675,113.385:0.0,0.0:0.0,1.8272e-13,1.0
-chr1	9332135	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTG,TTTGTTTGTTTGTTTGTTTG	.	.	END=9332150;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:48:1.0:3,5:3-3,5-5:27,21,0,0:3,9|5,18:NULL:331.849:366.612,131.36:0.0,0.0:0.0,1.0,1.0768e-11	0/0:31:0.99967:4,4:4-4,4-4:15,12,0,4:4,15:3,4:197.49:326.675,113.385:0.0,0.0:0.0,0.00013273,0.999871
-chr1	9335058	.	TTTTGTTTTGTTTTG	.	.	.	END=9335072;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.304:366.612,131.36:0.0,0.0:0.0,4.31613e-06,0.999995	0/0:29:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:145.745:326.675,113.385:0.0,0.0:0.0,6.17845e-07,1.0
-chr1	9336951	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9336970;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999245:4,4:4-4,4-4:14,17,0,2:4,14:2,1|3,1:230.494:366.612,131.36:0.0,0.0:1e-45,0.000526817,0.999476	0/0:26:0.978285:4,4:3-4,3-4:9,12,0,4:4,9:3,4:176.105:326.675,113.385:0.497026,0.497026:4.14237e-29,0.0118562,0.988168
-chr1	9340284	.	TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC	TGCTGCTGCTGCTGCTGCTGCTGCTGC	.	.	END=9340316;RU=tgc;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999971:9,9:9-9,9-9:18,16,0,5:9,18:4,1|6,2|7,1|8,1:264.09:366.612,131.36:0.0,0.0:0.999993,1.10553e-05,4.96732e-40	0/0:27:0.992223:11,11:11-11,11-11:10,9,0,8:11,10:3,1|4,2|7,1|9,1|10,3:192.427:326.675,113.385:0.0,0.0:2.04128e-27,0.00258091,0.997427
-chr1	9346828	.	TCATCATCATCA	.	.	.	END=9346839;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:41,4,0,0:4,41:NULL:195.359:366.612,131.36:0.0,0.0:0.0,2.65167e-12,1.0	0/0:42:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:257.942:326.675,113.385:0.0,0.0:0.0,6.09121e-07,1.0
-chr1	9348812	.	TTTGTTTTGTTTTGT	TTTGT	.	.	END=9348826;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0735964:1,1:1-4,1-4:0,19,0,0:NULL:NULL:177.141:366.612,131.36:0.883688,0.883688:0.231507,0.512275,0.256255	0/0:23:0.999229:3,3:3-3,3-3:14,9,0,0:3,14:NULL:141.122:326.675,113.385:0.0,0.0:0.0,0.000509649,0.999492
-chr1	9350228	.	ACAGCGACAGCGACAGCG	ACAGCG	.	.	END=9350245;RU=acagcg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.165627:1,1:1-2,1-2:0,21,0,0:NULL:NULL:186.527:366.612,131.36:0.311527,0.311527:0.406392,0.475241,0.118464	0/0:44:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:276.894:326.675,113.385:0.0,0.0:0.0,2.46273e-07,1.0
-chr1	9350646	.	TTTGTTTGTTTG	.	.	.	END=9350657;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999568:3,3:3-3,3-3:15,17,0,0:3,15:NULL:219.527:366.612,131.36:0.0,0.0:1e-45,0.00031849,0.999682	0/0:29:0.999998:3,3:3-3,3-3:18,9,0,2:3,18:2,2:163.919:326.675,113.385:0.0,0.0:0.0,9.79155e-06,0.999993
-chr1	9352617	.	TTTGTTTGTTTG	.	.	.	END=9352628;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:31,16,0,0:3,31:NULL:268.199:366.612,131.36:0.0,0.0:0.0,2.12163e-09,1.0	0/0:54:1.0:3,3:3-3,3-3:39,15,0,0:3,39:NULL:292.504:326.675,113.385:0.0,0.0:0.0,1.07657e-11,1.0
-chr1	9360153	.	TTGTTTGTTTGT	.	.	.	END=9360164;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:250.243:366.612,131.36:0.0,0.0:0.0,9.24726e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:198.994:326.675,113.385:0.0,0.0:0.0,5.31601e-07,1.0
-chr1	9366180	.	TCCCTCCCTCCCTCCC	.	.	.	END=9366195;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999289:4,4:4-4,4-4:15,11,0,0:4,15:NULL:159.697:366.612,131.36:0.0,0.0:0.0,0.00051322,0.999491	0/0:25:1.00001:4,4:4-4,4-4:21,4,0,0:4,21:NULL:122.492:326.675,113.385:0.0,0.0:0.0,3.79849e-06,1.0
-chr1	9384508	.	TGTGTGTGTGTG	TGTGTGTGTG,TGTGTGTGTGTGTG	.	.	END=9384519;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:53:0.99989:5,7:5-5,6-7:29,19,0,4:5,17|6,4|7,8:5,2|6,2:354.905:366.612,131.36:0.0,0.352842:1.35892e-21,1.0,9.49165e-16	0/0:26:0.628284:6,6:5-6,5-6:20,6,0,0:5,4|6,16:NULL:150.794:326.675,113.385:0.44763,0.44763:7.92581e-13,0.371769,0.62828
-chr1	9384520	.	TATATATATATATATATA	TATATATATATATATA	.	.	END=9384537;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.908251:8,8:6-10,6-10:18,21,0,0:8,15|9,3:NULL:276.123:366.612,131.36:0.754427,0.754427:0.908294,0.0918042,1.71562e-14	0/0:22:0.815459:9,9:8-9,8-9:16,6,0,0:8,3|9,13:NULL:131.98:326.675,113.385:0.425627,0.425627:3.99286e-13,0.184457,0.815606
-chr1	9392580	.	CACACACACACACACA	.	.	.	END=9392595;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:8,8:8-8,8-8:26,22,0,3:8,26:4,1|6,1|7,1:333.753:366.612,131.36:0.0,0.0:3.5e-44,1.14853e-07,1.0	0/0:48:1.0:8,8:8-8,8-8:32,12,0,3:8,32:5,2|6,1:259.698:326.675,113.385:0.0,0.0:0.0,1.69574e-09,1.0
-chr1	9394954	.	TTTCTTTTCTTTTCT	.	.	.	END=9394968;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999994:3,3:3-3,3-3:19,10,0,0:3,19:NULL:167.96:366.612,131.36:0.0,0.0:0.0,1.26792e-05,0.999987	0/0:30:0.999975:3,3:3-3,3-3:18,12,0,0:3,18:NULL:178.442:326.675,113.385:0.0,0.0:0.0,3.36197e-05,0.99997
-chr1	9397849	.	TCTCTCTCTCTC	.	.	.	END=9397860;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:6,6:6-6,6-6:38,21,0,0:6,38:NULL:345.738:366.612,131.36:0.0,0.0:0.0,6.80768e-11,1.0	0/0:40:1.0:6,6:6-6,6-6:24,15,0,0:6,24:NULL:235.651:326.675,113.385:0.0990099,0.0990099:0.0,9.29089e-07,1.0
-chr1	9400767	.	GAGGGAGGGAGG	.	.	.	END=9400778;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:33,27,0,0:3,33:NULL:381.784:366.612,131.36:0.0,0.0:0.0,1.46477e-09,1.0	0/0:38:1.00001:3,3:3-3,3-3:21,15,0,2:3,21:2,2:237.819:326.675,113.385:0.0,0.0:0.0,1.35646e-06,1.0
-chr1	9407672	.	ATATATATATATATAT	AT	.	.	END=9407687;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0268074:1,1:1-6,1-6:0,22,0,0:NULL:NULL:205.027:366.612,131.36:1.55644,1.55644:0.381771,0.483122,0.135186	0/0:19:0.986192:8,8:8-9,8-9:10,8,0,0:8,10:NULL:115.125:326.675,113.385:0.345543,0.345543:1.81266e-16,0.00695297,0.993062
-chr1	9413992	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9414011;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.996606:7,7:7-7,7-7:11,10,0,4:7,11:5,1|6,3:166.465:366.612,131.36:0.0,0.0:0.0,7.4379e-05,0.999926	0/0:36:0.999055:5,5:5-5,5-5:13,16,0,7:5,13:2,1|3,3|4,3:248.56:326.675,113.385:0.0,0.0:5.94545e-39,0.000475321,0.999529
-chr1	9418611	.	TTCTTTCTTTCT	.	.	.	END=9418622;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,19,0,2:3,22:2,2:271.278:366.612,131.36:0.0,0.0:0.0,1.01741e-06,1.0	0/0:37:1.0:3,3:3-3,3-3:26,11,0,0:3,26:NULL:199.853:326.675,113.385:0.0,0.0:0.0,9.92493e-08,1.0
-chr1	9420278	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=9420321;RU=tgtt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999993:8,8:8-8,8-8:18,22,0,9:8,18:3,1|5,3|6,1|7,4:343.572:366.612,131.36:0.0990099,0.0990099:1.0,2.31478e-06,0.0	0/0:53:1.0:11,11:11-15,11-15:29,15,0,7:11,29:3,3|5,2|9,1|10,1:313.405:326.675,113.385:1.08025,1.08025:0.0,1.55196e-08,1.0
-chr1	9422121	.	AATAAATAAATA	.	.	.	END=9422132;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999562:3,3:3-3,3-3:14,7,0,0:3,14:NULL:123.654:366.612,131.36:0.0,0.0:1.8e-44,0.000234214,0.999766	0/0:21:0.998933:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.022:326.675,113.385:0.0,0.0:2.4053e-41,0.000576164,0.999424
-chr1	9424740	.	TCTCTTCTCTTCTCT	.	.	.	END=9424754;RU=tctct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999984:3,3:3-3,3-3:18,16,0,0:3,18:NULL:218.131:366.612,131.36:0.0,0.0:0.0,2.62183e-05,0.999978	0/0:20:0.997447:3,3:3-3,3-3:12,8,0,0:3,12:NULL:121.749:326.675,113.385:0.0,0.0:3.67533e-40,0.00153279,0.998473
-chr1	9431832	.	AAACCAAAACCAAAACCA	.	.	.	END=9431849;RU=aaacca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999845:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.258:366.612,131.36:0.0,0.0:0.0,0.000104917,0.999896	0/0:25:0.999993:3,3:3-3,3-3:19,6,0,0:3,19:NULL:134.242:326.675,113.385:0.0,0.0:0.0,1.72612e-05,0.999986
-chr1	9435914	.	ACAGAGACAGAGACAGAGACAGAG	.	.	.	END=9435937;RU=acagag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999917:4,4:3-4,3-4:16,21,0,4:4,16:2,2|3,2:279.521:366.612,131.36:0.374147,0.374147:0.0,6.21351e-05,0.99994	0/0:27:0.999746:4,4:3-4,3-4:15,8,0,3:4,15:2,2|3,1:155.267:326.675,113.385:0.374147,0.374147:7e-45,0.00014349,0.999857
-chr1	9438550	.	AAATCAAATCAAATC	.	.	.	END=9438564;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999971:3,3:3-3,3-3:18,19,0,0:3,18:NULL:249.079:366.612,131.36:0.0,0.0:0.0,3.60357e-05,0.999964	0/0:35:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:208.921:326.675,113.385:0.0,0.0:0.0,4.69581e-06,0.999995
-chr1	9440244	.	CCACCACCACCACCACCA	.	.	.	END=9440261;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:19,13,0,5:6,19:4,2|5,3:240.689:366.612,131.36:0.0,0.0:0.0,4.53287e-06,0.999995	0/0:31:1.00001:6,6:6-6,6-6:22,7,0,2:6,22:5,2:161.055:326.675,113.385:0.0,0.0:0.0,8.65582e-07,1.0
-chr1	9440854	.	TTATTATTATTATTA	.	.	.	END=9440868;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997378:5,5:5-5,5-5:11,10,0,3:5,11:4,3:159.876:366.612,131.36:0.0,0.0:3.52558e-28,0.00105255,0.998952	0/0:15:0.981375:5,5:5-5,5-5:9,4,0,2:5,9:4,2:90.8043:326.675,113.385:0.0,0.0:8.55695e-23,0.00799974,0.992018
-chr1	9442366	.	TCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=9442379;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.983957:8,8:8-9,8-9:10,18,0,0:8,10:NULL:206.99:366.612,131.36:0.46122,0.46122:7.8753e-34,0.00705923,0.992956	0/0:34:0.990911:7,7:6-8,6-8:11,21,0,0:7,11:NULL:231.834:326.675,113.385:0.446534,0.446534:6.00934e-24,0.00629505,0.993721
-chr1	9443711	.	ATACATACATACATAC	.	.	.	END=9443726;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.9997:4,4:4-4,4-4:14,18,0,4:4,14:2,1|3,3:250.416:366.612,131.36:0.0,0.0:1.09036e-38,0.000189682,0.999812	0/0:15:0.993713:4,4:4-4,4-4:11,4,0,0:4,11:NULL:78.9:326.675,113.385:0.0,0.0:1.21939e-30,0.00338957,0.996618
-chr1	9444202	.	ACCCACCCACCC	.	.	.	END=9444213;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.661794:3,3:2-3,2-3:4,20,0,0:3,4:NULL:195.19:366.612,131.36:0.240494,0.240494:1.39751e-12,0.218393,0.781647	0/0:26:0.991091:3,3:3-3,3-3:10,16,0,0:3,10:NULL:189.381:326.675,113.385:0.0,0.0:1.7653e-30,0.0063046,0.993708
-chr1	9450506	.	GGGTGGGTGGGT	.	.	.	END=9450517;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999723:3,3:3-3,3-3:15,13,0,0:3,15:NULL:178.435:366.612,131.36:0.0,0.0:0.0,0.000165041,0.999835	0/0:23:0.999917:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.376:326.675,113.385:0.0,0.0:0.0,5.0317e-05,0.999949
-chr1	9452272	.	AAAACAAAACAAAAC	.	.	.	END=9452286;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999909:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.479:366.612,131.36:0.0,0.0:0.0,5.94196e-05,0.999941	0/0:37:1.0:3,3:3-3,3-3:25,9,0,3:3,25:2,3:202.435:326.675,113.385:0.0,0.0:0.0,8.19423e-08,1.0
-chr1	9459770	.	TCTCTCTCTCTC	.	.	.	END=9459781;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998603:6,6:6-6,6-6:13,12,0,3:6,13:5,3:187.993:366.612,131.36:0.0,0.0:7.18605e-30,0.000555701,0.999447	0/0:21:0.998424:6,6:6-7,6-7:13,7,0,0:6,13:NULL:113.472:326.675,113.385:0.345543,0.345543:2.92193e-30,0.000800413,0.999203
-chr1	9461244	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	END=9461298;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.998204:13,13:12-13,12-13:12,16,0,19:13,12:4,4|6,3|7,1|8,2|9,2|10,3|11,1|12,3:336.703:366.612,131.36:0.35561,0.35561:0.0,7.50168e-05,0.999926	0/0:46:0.988769:11,11:6-11,6-11:10,16,0,19:11,10:3,2|4,2|5,3|6,3|7,5|8,1|9,2|10,1:326.85:326.675,113.385:2.23815,2.23815:4.06269e-27,0.00860565,0.991413
-chr1	9462516	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT	.	.	END=9462541;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0142412:12,12:13-17,13-17:0,10,0,0:NULL:NULL:89.5365:366.612,131.36:1.95664,1.95664:0.118219,0.453785,0.428162	0/0:13:0.79068:13,13:11-14,11-14:7,3,0,0:13,7:NULL:60.1106:326.675,113.385:0.783743,0.783743:1.10101e-07,0.0955401,0.904565
-chr1	9463887	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACA	.	.	END=9463930;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:0.296089:19,22:18-19,18-24:10,14,0,9:18,4|19,6:5,1|6,1|10,1|11,1|17,3|18,1|22,1:257.221:366.612,131.36:0.35561,2.07165:5.98453e-05,0.999941,1.80856e-16	0/0:28:0.738784:22,22:21-22,21-22:5,10,0,12:22,5:4,1|5,2|8,1|9,1|11,1|13,1|16,1|17,1|21,3:208.298:326.675,113.385:0.270063,0.270063:6.73055e-07,0.0717911,0.928307
-chr1	9468830	.	GAGGGAGGGAGG	.	.	.	END=9468841;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:20,21,0,0:3,20:NULL:262.44:366.612,131.36:0.0,0.0:0.0,1.11017e-05,0.999993	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:196.84:326.675,113.385:0.0,0.0:0.0,4.90263e-07,1.0
-chr1	9470692	.	CACACACACACA	.	.	.	END=9470703;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:6,6:6-6,6-6:24,8,0,2:6,24:5,2:184.022:366.612,131.36:0.0,0.0:0.0,2.70614e-07,1.0	0/0:41:1.0:6,6:6-6,6-6:25,11,0,5:6,25:4,3|5,2:239.921:326.675,113.385:0.0,0.0:0.0,1.09519e-07,1.0
-chr1	9471535	.	GAGAGGAGAGGAGAG	.	.	.	END=9471549;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.679762:3,3:1-3,1-3:4,13,0,0:3,4:NULL:136.237:366.612,131.36:0.390054,0.390054:2.55998e-13,0.199129,0.800916	0/0:6:0.475982:3,3:3-3,3-3:3,3,0,0:3,3:NULL:40.6212:326.675,113.385:0.281439,0.281439:2.60341e-10,0.221156,0.778882
-chr1	9472682	.	ATGAATGAATGA	.	.	.	END=9472693;RU=atga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.977545:3,3:3-3,3-3:8,13,0,0:3,8:NULL:147.361:366.612,131.36:0.0,0.0:3.09987e-24,0.0139718,0.986059	0/0:22:0.997079:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.437:326.675,113.385:0.0,0.0:7.52693e-33,0.00197559,0.998033
-chr1	9472967	.	TGTGTGTGTGTGTG	.	.	.	END=9472980;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99761:7,7:7-8,7-8:12,11,0,2:7,12:5,1|6,1:161.169:366.612,131.36:0.36513,0.36513:5.2729e-25,0.00114661,0.99886	0/0:22:0.999708:7,7:7-7,7-7:15,5,0,2:7,15:6,2:120.874:326.675,113.385:0.0,0.0:2.76285e-31,0.000108582,0.999894
-chr1	9474757	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=9474784;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:14,14:14-14,14-14:30,17,0,10:13,2|14,28:8,1|10,1|11,3|12,4|13,1:368.603:366.612,131.36:0.0,0.0:1.7378e-41,3.7235e-07,1.0	0/0:50:0.999638:14,14:13-14,13-14:20,20,0,9:12,2|14,18:5,1|7,1|10,3|13,4:347.548:326.675,113.385:0.294378,0.294378:9.25131e-27,0.000345403,0.999658
-chr1	9475821	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9475866;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.306361:19,29:19-20,19-31:14,17,0,9:18,2|19,9|20,3:6,2|7,1|11,2|16,1|17,1|18,1|29,1:310.496:366.612,131.36:0.35561,4.9792:0.00254241,0.997465,1.18371e-28	0/0:32:0.415505:23,23:21-23,21-23:6,9,0,16:22,2|23,4:5,1|7,1|8,1|9,2|10,1|11,2|14,2|16,1|17,1|18,1|19,1|20,2:246.597:326.675,113.385:0.716027,0.716027:0.000398632,0.510801,0.488861
-chr1	9476189	.	GCAGGCAGGCAG	.	.	.	END=9476200;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:217.696:366.612,131.36:0.0,0.0:0.0,3.95231e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:19,13,0,2:3,19:2,2:208.939:326.675,113.385:0.0,0.0:0.0,6.78018e-06,0.999994
-chr1	9482508	.	AATTAATTAATTAATTAATT	.	.	.	END=9482527;RU=aatt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.852369:5,5:5-5,5-5:7,16,0,0:5,7:NULL:175.534:366.612,131.36:0.19802,0.19802:5.761e-20,0.119528,0.880572	0/0:18:0.990887:5,5:5-5,5-5:10,8,0,0:5,10:NULL:112.505:326.675,113.385:0.0,0.0:1.32822e-28,0.00598998,0.994023
-chr1	9482533	.	AAAGAAAGAAAG	.	.	.	END=9482544;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.996445:3,3:3-3,3-3:12,14,0,0:3,12:NULL:176.654:366.612,131.36:0.0,0.0:1.69466e-35,0.00239988,0.997608	0/0:27:0.999906:3,3:3-3,3-3:16,11,0,0:3,16:NULL:162.705:326.675,113.385:0.0,0.0:0.0,5.78138e-05,0.999942
-chr1	9491448	.	AAATAAATAAATAAAT	.	.	.	END=9491463;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.997205:4,4:4-4,4-4:12,3,0,2:4,12:2,1|3,1:90.9731:366.612,131.36:0.0,0.0:9.02464e-38,0.00126858,0.998738	0/0:11:0.987186:4,4:4-4,4-4:10,1,0,0:4,10:NULL:50.208:326.675,113.385:0.0,0.0:6.382e-32,0.00633264,0.993684
-chr1	9496534	.	GAGGGAGGGAGG	.	.	.	END=9496545;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:34,16,0,0:3,34:NULL:275.852:366.612,131.36:0.0,0.0:0.0,1.86609e-10,1.0	0/0:35:1.0:3,3:3-3,3-3:28,7,0,0:3,28:NULL:174.907:326.675,113.385:0.0,0.0:0.0,2.73175e-08,1.0
-chr1	9497089	.	ACCAACCAACCA	.	.	.	END=9497100;RU=acca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999456:3,3:3-3,3-3:16,30,0,0:3,16:NULL:331.528:366.612,131.36:0.0,0.0:0.0,0.000509167,0.999492	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:222.338:326.675,113.385:0.0,0.0:0.0,1.24897e-06,1.0
-chr1	9497489	.	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	ATTATTATTATTATTATTATTATTATTATT	.	.	END=9497533;RU=att;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.994666:10,10:9-10,9-10:12,7,0,0:10,12:NULL:118.12:366.612,131.36:0.270063,0.270063:1.0,0.0,0.0	0/0:23:0.875025:15,15:15-15,15-15:6,9,0,8:15,6:4,1|6,2|8,1|10,1|11,1|13,1|14,1:168.58:326.675,113.385:0.29703,0.29703:1.54199e-10,0.051828,0.948252
-chr1	9497958	.	TTTGTTTGTTTG	.	.	.	END=9497969;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:32,11,0,2:3,32:2,2:241.553:366.612,131.36:0.0,0.0:0.0,9.19255e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:157.936:326.675,113.385:0.0,0.0:0.0,6.28813e-08,1.0
-chr1	9502657	.	ACACACACACAC	.	.	.	END=9502668;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:6,6:6-6,6-6:23,9,0,3:6,23:4,1|5,2:197.511:366.612,131.36:0.0,0.0:0.0,3.19025e-07,1.0	0/0:24:0.999982:6,6:6-6,6-6:18,4,0,2:6,18:4,1|5,1:123.674:326.675,113.385:0.0,0.0:2.646e-42,2.0149e-05,0.99998
-chr1	9504503	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=9504522;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:23,11,0,0:4,23:NULL:194.415:366.612,131.36:0.0,0.0:0.0,9.40221e-07,1.0	0/0:22:0.999891:4,4:4-4,4-4:17,5,0,0:4,17:NULL:115.806:326.675,113.385:0.0,0.0:0.0,7.52509e-05,0.999926
-chr1	9508248	.	CAAACAAACAAA	.	.	.	END=9508259;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,10,0,3:3,22:2,2|3,1:200.333:366.612,131.36:0.0,0.0:0.0,3.35221e-07,1.0	0/0:35:0.9997:3,3:3-3,3-3:15,20,0,0:3,15:NULL:240.187:326.675,113.385:0.0,0.0:0.0,0.000252808,0.99975
-chr1	9508516	.	ATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9508554;RU=ata;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.94838:14,14:14-14,14-14:8,4,0,2:14,8:4,1|10,1:88.2184:366.612,131.36:0.0,0.0:9.66214e-16,0.0202783,0.979761	0/0:33:0.91691:13,13:13-14,13-14:8,15,0,9:13,8:3,1|4,3|5,1|7,1|8,2|10,1:246.436:326.675,113.385:0.374147,0.374147:5.2725e-12,0.0673377,0.932756
-chr1	9508833	.	CACACACACACACACACA	.	.	.	END=9508850;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.955873:9,9:8-9,8-9:9,12,0,0:9,9:NULL:146.289:366.612,131.36:0.270063,0.270063:7.22498e-16,0.0326351,0.967427	0/0:27:0.999883:9,9:9-11,9-11:17,7,0,2:9,17:5,1|8,1:149.286:326.675,113.385:0.691086,0.691086:8.54708e-30,4.60868e-05,0.999956
-chr1	9511167	.	TTATTTATTTAT	.	.	.	END=9511178;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.996662:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.398:366.612,131.36:0.0,0.0:1.32255e-40,0.00211994,0.997889	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:258.692:326.675,113.385:0.0,0.0:0.0,5.52396e-07,1.0
-chr1	9514249	.	TGGATGGATGGATGGA	.	.	.	END=9514264;RU=tgga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:4,4:4-4,4-4:21,9,0,2:4,21:3,2:178.171:366.612,131.36:0.0,0.0:0.0,2.86383e-06,1.0	0/0:30:0.999927:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:178.978:326.675,113.385:0.0,0.0:0.0,3.8318e-05,0.999963
-chr1	9516045	.	AAAGAAAGAAAG	.	.	.	END=9516056;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999963:3,3:3-3,3-3:17,12,0,0:3,17:NULL:175.375:366.612,131.36:0.0,0.0:0.0,3.04347e-05,0.999971	0/0:20:0.999451:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.773:326.675,113.385:0.0,0.0:0.0,0.000288093,0.999713
-chr1	9516633	.	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAG,GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	.	.	END=9516692;RU=gggag;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0677191:6,6:5-8,5-8:0,11,0,4:NULL:3,1|4,2|5,1:125.733:366.612,131.36:1.04988,1.04988:1.0,0.0,0.0	2/2:1:0.00037075:8,8:8-8,8-8:0,1,0,0:NULL:NULL:8.16001:326.675,113.385:0.0,0.0:0.0410663,0.409397,0.549689
-chr1	9517848	.	ATTTATTTATTT	ATTTATTT	.	.	END=9517859;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:27:0.998884:2,3:2-2,2-3:12,15,0,0:2,10|3,2:NULL:190.032:366.612,131.36:0.0,0.46122:0.00112286,0.998883,1.13057e-29	0/0:26:0.98931:3,3:3-3,3-3:11,15,0,0:3,11:NULL:186.743:326.675,113.385:0.19802,0.19802:5.67931e-35,0.00761143,0.992408
-chr1	9522426	.	TTTGTTTGTTTG	.	.	.	END=9522437;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,9,0,2:3,21:2,1|3,1:178.619:366.612,131.36:0.0,0.0:0.0,6.71013e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:216.985:326.675,113.385:0.0,0.0:0.0,1.61937e-07,1.0
-chr1	9525101	.	CACACACACACACACACA	.	.	.	END=9525118;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.990074:9,9:8-9,8-9:17,8,0,2:8,2|9,15:7,1|9,1:166.143:366.612,131.36:0.311527,0.311527:1.00911e-29,0.00990056,0.99012	0/0:28:0.998546:9,9:9-9,9-9:13,12,0,3:9,13:4,2|8,1:190.377:326.675,113.385:0.0,0.0:6.30261e-22,0.000801553,0.999202
-chr1	9525246	.	ATGAATGAATGAATGAATGAATGA	.	.	.	END=9525269;RU=atga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:27,10,0,2:6,27:3,1|5,1:211.986:366.612,131.36:0.0990099,0.0990099:0.0,4.27536e-08,1.0	0/0:34:0.999832:6,6:5-6,5-6:16,14,0,3:6,16:3,1|5,2:213.876:326.675,113.385:0.345543,0.345543:1e-45,0.000123183,0.999879
-chr1	9525501	.	AAACAAACAAACAAAC	.	.	.	END=9525516;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.99998:4,4:4-4,4-4:18,10,0,6:4,18:2,2|3,4:207.534:366.612,131.36:0.0,0.0:0.0,1.20039e-05,0.999987	0/0:32:0.999956:4,4:4-4,4-4:17,10,0,5:4,17:2,1|3,4:196.242:326.675,113.385:0.0,0.0:0.0,2.47553e-05,0.999978
-chr1	9525744	.	GAGGAGGAGGAG	.	.	.	END=9525755;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:205.735:366.612,131.36:0.0,0.0:0.0,1.90918e-06,1.0	0/0:35:0.999892:4,4:4-4,4-4:16,17,0,2:4,16:3,2:236.803:326.675,113.385:0.0,0.0:0.0,6.3783e-05,0.99994
-chr1	9526193	.	AAACAAACAAACAAAC	.	.	.	END=9526208;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999704:4,4:4-4,4-4:15,24,0,3:4,15:3,3:303.015:366.612,131.36:0.0,0.0:0.0,0.000129205,0.999872	0/0:22:0.991715:4,4:4-4,4-4:11,11,0,0:4,11:NULL:144.452:326.675,113.385:0.0,0.0:3.33123e-34,0.00610614,0.99391
-chr1	9526390	.	AAATAAATAAAT	.	.	.	END=9526401;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:222.351:366.612,131.36:0.0,0.0:0.0,3.88531e-08,1.0	0/0:24:0.999751:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.747:326.675,113.385:0.0,0.0:0.0,0.000140297,0.999864
-chr1	9529332	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC	.	.	END=9529373;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.488687:17,18:7-18,7-18:10,10,0,4:16,2|17,2|18,6:10,2|12,1|15,1:172.994:366.612,131.36:4.96592,5.25089:0.99975,0.0002516,4.76555e-21	0/0:35:0.68762:21,21:20-21,20-21:8,14,0,13:20,2|21,6:8,2|10,3|11,1|12,2|13,1|15,2|18,1|20,1:277.011:326.675,113.385:0.382696,0.382696:1.44107e-06,0.28187,0.718132
-chr1	9533361	.	AGAGAGAGAGAG	.	.	.	END=9533372;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:6,6:6-7,6-7:24,11,0,0:6,24:NULL:197.143:366.612,131.36:0.253975,0.253975:0.0,5.50644e-07,1.0	0/0:33:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:193.621:326.675,113.385:0.0,0.0:0.0,8.066e-06,0.999994
-chr1	9533849	.	AAATAAATAAAT	.	.	.	END=9533860;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:229.092:366.612,131.36:0.0,0.0:0.0,9.41042e-07,1.0	0/0:17:0.994368:3,3:3-3,3-3:11,6,0,0:3,11:NULL:102.525:326.675,113.385:0.0,0.0:1.5121e-35,0.00279059,0.997216
-chr1	9536352	.	CCCACCCACCCA	CCCA	.	.	END=9536363;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.222461:1,1:1-2,1-2:0,41,0,0:NULL:NULL:368.316:366.612,131.36:0.236383,0.236383:0.544329,0.393009,0.0628117	0/0:32:0.999949:3,3:3-3,3-3:17,15,0,0:3,17:NULL:211.421:326.675,113.385:0.0,0.0:0.0,4.53939e-05,0.999956
-chr1	9536489	.	TGGAGCTGGAGCTGGAGC	.	.	.	END=9536506;RU=tggagc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:3,3:3-3,3-3:27,33,0,2:3,27:2,2:415.135:366.612,131.36:0.0,0.0:0.0,4.20734e-08,1.0	0/0:29:1.0:3,3:3-3,3-3:23,4,0,2:3,23:2,2:141.472:326.675,113.385:0.0,0.0:0.0,3.16403e-07,1.0
-chr1	9541751	.	TATATTATATTATAT	.	.	.	END=9541765;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:175.287:366.612,131.36:0.0,0.0:0.0,9.08982e-08,1.0	0/0:18:0.999729:3,3:3-3,3-3:15,3,0,0:3,15:NULL:84.3241:326.675,113.385:0.0,0.0:1e-45,0.000132508,0.999871
-chr1	9542204	.	TATTTATTTATTTATT	.	.	.	END=9542219;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.99959:4,4:4-4,4-4:14,21,0,2:4,14:2,1|3,1:259.97:366.612,131.36:0.0,0.0:2.57224e-40,0.00025296,0.99975	0/0:30:0.999828:4,4:4-4,4-4:16,12,0,2:4,16:3,2:187.136:326.675,113.385:0.0,0.0:3e-45,0.000103024,0.999896
-chr1	9544492	.	AAACAAACAAAC	.	.	.	END=9544503;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999924:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.571:366.612,131.36:0.0,0.0:0.0,5.20927e-05,0.999949	0/0:29:0.999936:3,3:3-3,3-3:17,12,0,0:3,17:NULL:171.869:326.675,113.385:0.0,0.0:0.0,4.52417e-05,0.999956
-chr1	9544579	.	AAATAAATAAAT	AAATAAATAAATAAAT	.	.	END=9544590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.95751:4,4:4-4,4-4:8,15,0,0:4,8:NULL:169.733:366.612,131.36:0.0,0.0:1.14659e-30,0.0221433,0.9779	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.482:326.675,113.385:0.0,0.0:0.0,4.78866e-07,1.0
-chr1	9544631	.	CAAACAAACAAACAAACAAA	CAAACAAACAAA	.	.	END=9544650;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.858271:3,3:3-3,3-3:6,8,0,0:3,6:NULL:96.7295:366.612,131.36:0.0,0.0:0.957888,0.0421824,2.13894e-21	0/0:30:0.999989:5,5:5-5,5-5:17,8,0,5:5,17:3,1|4,4:180.185:326.675,113.385:0.0,0.0:4e-45,1.66117e-05,0.999986
-chr1	9550027	.	AGGCAGGCTGAGGCAGGCTGAGGCAGGCTG	.	.	.	END=9550056;RU=aggcaggctg;PERIOD=10;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999978:3,3:3-3,3-3:19,18,0,3:3,19:2,3:258.204:366.612,131.36:0.0,0.0:9.2709e-24,3.21158e-05,0.999971	0/0:22:0.991697:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.68:326.675,113.385:0.0,0.0:3.84619e-14,0.00708497,0.992933
-chr1	9551002	.	TGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGT	.	.	END=9551022;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.0:5,5:5-5,5-5:18,17,0,2:5,18:4,1|5,1:236.622:366.612,131.36:0.0,0.0:0.999995,5.00637e-06,0.0	0/0:46:1.0:7,7:7-7,7-7:30,12,0,4:7,30:3,1|4,1|5,1|6,1:257.203:326.675,113.385:0.0,0.0:0.0,4.08431e-09,1.0
-chr1	9551523	.	GAAAGAAAGAAA	.	.	.	END=9551534;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:239.44:366.612,131.36:0.0,0.0:0.0,4.80066e-06,0.999995	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.768:326.675,113.385:0.0,0.0:0.0,1.69865e-06,1.0
-chr1	9553997	.	ACAGACAGACAG	.	.	.	END=9554008;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:243.212:366.612,131.36:0.0,0.0:0.0,1.54342e-06,1.0	0/0:25:0.999424:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.558:326.675,113.385:0.0,0.0:0.0,0.000310663,0.99969
-chr1	9555100	.	CATACATACATACATA	.	.	.	END=9555115;RU=cata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:4,4:4-4,4-4:21,18,0,3:4,21:2,1|3,2:272.614:366.612,131.36:0.0,0.0:0.0,3.50491e-06,1.0	0/0:43:1.0:4,4:4-4,4-4:28,11,0,4:4,28:3,4:240.061:326.675,113.385:0.0,0.0:0.0,7.57256e-09,1.0
-chr1	9557814	.	AGGCAGGCAGGC	.	.	.	END=9557825;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:288.198:366.612,131.36:0.0,0.0:0.0,1.93264e-07,1.0	0/0:49:1.0:3,3:3-3,3-3:28,19,0,2:3,28:2,2:303.728:326.675,113.385:0.0,0.0:0.0,2.70369e-08,1.0
-chr1	9559035	.	TTTATTTATTTA	.	.	.	END=9559046;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:19,18,0,0:3,19:NULL:237.608:366.612,131.36:0.0,0.0:0.0,9.02066e-06,0.999994	0/0:29:0.999997:3,3:2-3,2-3:18,8,0,2:3,18:2,2:159.677:326.675,113.385:0.253975,0.253975:0.0,9.92915e-06,0.999993
-chr1	9559216	.	CTATCTATCTAT	.	.	.	END=9559227;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998311:3,3:3-3,3-3:12,13,0,0:3,12:NULL:166.195:366.612,131.36:0.0,0.0:5.86568e-39,0.00103494,0.998968	0/0:20:0.99055:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.843:326.675,113.385:0.0,0.0:1.5807e-32,0.00583339,0.994181
-chr1	9559239	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=9559262;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998634:4,4:4-4,4-4:12,9,0,4:4,12:3,4:160.987:366.612,131.36:0.0,0.0:8.31654e-36,0.000721811,0.99928	0/0:24:0.975961:4,4:4-4,4-4:9,12,0,3:4,9:2,2|3,1:166.59:326.675,113.385:0.0,0.0:1.77814e-26,0.0163539,0.983681
-chr1	9561161	.	AAAGAAAGAAAG	.	.	.	END=9561172;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:251.128:366.612,131.36:0.0,0.0:0.0,3.12008e-06,1.0	0/0:30:0.999957:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.958:326.675,113.385:0.0,0.0:0.0,3.4985e-05,0.999964
-chr1	9567718	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9567759;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.368352:22,30:22-22,22-31:6,12,0,12:22,6:5,1|9,3|11,1|12,1|15,1|17,1|19,1|20,2|30,1:247.171:366.612,131.36:0.0,4.05102:7.66898e-17,7.24313e-08,1.0	0/0:54:0.998695:21,21:18-21,18-21:16,17,0,18:21,16:4,1|5,1|7,4|8,2|9,2|10,1|11,3|12,1|13,1|16,1|19,1:371.306:326.675,113.385:0.712046,0.712046:2.3557e-18,0.000297949,0.999705
-chr1	9569212	.	GTGGTGGTGGTG	.	.	.	END=9569223;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.997553:4,4:4-4,4-4:12,17,0,2:4,12:3,2:224.309:366.612,131.36:0.0,0.0:7.40471e-33,0.00122997,0.998777	0/0:30:0.991951:4,4:4-4,4-4:11,19,0,0:4,11:NULL:216.225:326.675,113.385:0.0,0.0:2.08963e-30,0.00592683,0.99409
-chr1	9571015	.	AAAGGAAAGGAAAGG	.	.	.	END=9571029;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.984032:3,3:3-3,3-3:10,27,0,0:3,10:NULL:289.309:366.612,131.36:0.0,0.0:5.75521e-33,0.0138028,0.986229	0/0:35:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.53:326.675,113.385:0.0,0.0:0.0,2.13318e-05,0.999979
-chr1	9571032	.	AAAGGAAAGGAAAGG	.	.	.	END=9571046;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999745:3,3:3-3,3-3:15,22,0,2:3,15:2,2:276.457:366.612,131.36:0.0,0.0:0.0,0.000159529,0.999842	0/0:36:0.999955:3,3:3-3,3-3:17,16,0,3:3,17:2,3:239.298:326.675,113.385:0.0,0.0:0.0,3.66339e-05,0.999964
-chr1	9571264	.	AGATTAGATTAGATTAGATT	.	.	.	END=9571283;RU=agatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999969:4,4:4-4,4-4:19,17,0,0:4,19:NULL:235.226:366.612,131.36:0.0,0.0:0.0,4.0984e-05,0.999963	0/0:40:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:246.326:326.675,113.385:0.0,0.0:0.0,1.61577e-06,1.0
-chr1	9571292	.	CATACATACATA	.	.	.	END=9571303;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999992:3,3:3-3,3-3:19,17,0,0:3,19:NULL:234.857:366.612,131.36:0.0,0.0:0.0,1.7738e-05,0.999986	0/0:30:0.999841:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.408:326.675,113.385:0.0,0.0:4.61e-43,0.000103159,0.999896
-chr1	9571354	.	GATTGATTGATT	.	.	.	END=9571365;RU=gatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.995849:3,3:3-3,3-3:11,15,0,2:3,11:2,2:198.858:366.612,131.36:0.0,0.0:5.99504e-37,0.00180972,0.998194	0/0:32:0.999991:3,3:3-3,3-3:18,12,0,2:3,18:2,2:191.128:326.675,113.385:0.0,0.0:0.0,1.34985e-05,0.999987
-chr1	9575481	.	TGGTGGTGGTGG	.	.	.	END=9575492;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:29,21,0,0:4,29:NULL:308.213:366.612,131.36:0.0,0.0:0.0,2.5531e-08,1.0	0/0:51:1.0:4,4:4-4,4-4:28,23,0,0:4,28:NULL:322.028:326.675,113.385:0.0,0.0:0.0,2.93502e-08,1.0
-chr1	9579567	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9579598;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.286408:16,21:16-16,16-24:18,13,0,13:15,3|16,15:6,1|10,1|11,3|13,3|14,3|15,1|21,1:314.996:366.612,131.36:0.0,3.20612:3.07634e-19,3.561e-05,0.999964	0/0:33:0.865572:16,16:15-16,15-16:18,7,0,8:15,5|16,13:7,2|9,1|11,1|13,2|15,1|16,1:210.355:326.675,113.385:0.442564,0.442564:1.78213e-20,0.13442,0.865673
-chr1	9579965	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9579994;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.881122:15,15:13-17,13-17:6,20,0,13:15,6:4,1|7,2|9,1|10,1|11,3|12,1|13,1|14,2|15,1:306.867:366.612,131.36:1.01087,1.01087:1.33388e-15,0.0251713,0.974879	0/0:25:0.982053:15,15:14-15,14-15:15,3,0,7:14,2|15,13:6,1|10,2|11,1|13,2|14,1:151.138:326.675,113.385:0.236383,0.236383:1.49043e-14,0.0174023,0.982635
-chr1	9579994	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=9580031;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:29:0.999525:17,19:16-17,16-19:13,10,0,4:16,3|17,6|19,4:5,3|10,1:195.896:366.612,131.36:0.21692,0.801063:4.20143e-06,0.999996,2.77594e-06	0/0:22:0.999096:19,19:19-19,19-19:15,2,0,5:19,15:15,1|16,1|17,2|18,1:125.664:326.675,113.385:0.0,0.0:2.3307e-29,0.000121848,0.99988
-chr1	9582597	.	CCTCCTCCTCCT	.	.	.	END=9582608;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.882089:4,4:4-4,4-4:7,21,0,0:4,7:NULL:219.266:366.612,131.36:0.29703,0.29703:6.7549e-21,0.0953619,0.904739	0/0:31:0.999283:4,4:4-4,4-4:13,16,0,2:4,13:3,2:218.782:326.675,113.385:0.0,0.0:9.46324e-39,0.00046551,0.999537
-chr1	9583195	.	AAATAAATAAATAAAT	.	.	.	END=9583210;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999814:4,4:4-4,4-4:15,13,0,5:4,15:2,1|3,4:206.943:366.612,131.36:0.0,0.0:0.0,8.99761e-05,0.999911	0/0:27:0.999477:4,4:3-5,3-5:14,7,0,4:4,14:3,4:143.282:326.675,113.385:0.633818,0.633818:4.2e-44,0.000160403,0.999842
-chr1	9583659	.	AACCAACCAACC	.	.	.	END=9583670;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.997728:3,3:3-3,3-3:12,15,0,0:3,12:NULL:186.758:366.612,131.36:0.0,0.0:9.2434e-41,0.00143367,0.998572	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:176.01:326.675,113.385:0.0,0.0:0.0,1.07304e-06,1.0
-chr1	9585234	.	AGAGAGAGAGAG	.	.	.	END=9585245;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:6,6:6-6,6-6:35,15,0,2:6,35:4,1|5,1:293.376:366.612,131.36:0.0,0.0:0.0,1.1327e-10,1.0	0/0:31:0.999978:6,6:6-7,6-7:18,12,0,0:6,18:NULL:181.935:326.675,113.385:0.236383,0.236383:4.664e-42,3.27745e-05,0.99997
-chr1	9587125	.	TAAATAAATAAA	.	.	.	END=9587136;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999965:3,3:3-3,3-3:18,22,0,0:3,18:NULL:276.885:366.612,131.36:0.0,0.0:0.0,2.96693e-05,0.999971	0/0:36:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:204.769:326.675,113.385:0.0,0.0:0.0,4.47188e-07,1.0
-chr1	9588885	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9588932;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:33:0.276794:24,32:24-24,24-32:7,10,0,16:24,7:4,1|6,1|7,2|8,1|9,2|16,2|20,3|21,3|29,1:255.89:366.612,131.36:0.0,3.61865:4.9677e-15,1.70444e-07,1.0	0/0:36:0.776549:24,24:23-25,23-25:9,10,0,16:23,2|24,7:8,2|11,1|12,2|13,2|14,3|15,3|16,1|18,1|21,1:266.77:326.675,113.385:0.532817,0.532817:2.4315e-08,0.173489,0.826583
-chr1	9591730	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9591759;RU=tc;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:6:0.021554:14,14:12-14,12-14:0,2,0,2:NULL:10,1|12,1:34.2186:366.612,131.36:0.947603,0.947603:0.348761,0.49392,0.157365	1/1:8:0.025942:12,12:12-15,12-15:0,5,0,2:NULL:6,1|8,1:58.7703:326.675,113.385:1.46059,1.46059:0.206663,0.496322,0.297103
-chr1	9591759	.	CACACACACACACACA	.	.	.	END=9591774;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.847064:8,8:8-13,8-13:7,2,0,0:8,7:NULL:47.2816:366.612,131.36:2.19962,2.19962:7.07238e-10,0.0476111,0.952465	0/0:12:0.930569:8,8:7-8,7-8:8,3,0,0:8,8:NULL:59.1515:326.675,113.385:0.35561,0.35561:3.91321e-11,0.0389658,0.961101
-chr1	9591774	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=9591823;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.0191554:25,25:25-30,25-30:0,2,0,4:NULL:7,1|10,1|11,1|16,1:50.299:366.612,131.36:0.949876,0.949876:0.0,0.0,1.0	0/0:10:0.178814:25,25:22-25,22-25:2,3,0,4:25,2:5,1|10,1|12,1|17,1:67.505:326.675,113.385:0.707349,0.707349:0.00626058,0.457123,0.53674
-chr1	9600354	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9600391;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.859315:19,19:19-20,19-20:15,12,0,11:18,2|19,11|20,2:8,1|9,1|12,1|13,1|14,3|16,2|17,1|18,1:276.718:366.612,131.36:0.436093,0.436093:2.62061e-13,0.00978464,0.990238	0/1:32:0.849525:19,20:18-19,18-20:13,6,0,12:18,2|19,8|20,3:4,2|6,2|7,1|13,1|14,2|15,1|16,2|18,1:220.619:326.675,113.385:0.169767,0.620058:1.20253e-11,0.00373575,0.996277
-chr1	9600392	.	AGAGAGAGAGAGAGAGAG	.	.	.	END=9600409;RU=ag;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999913:9,9:9-9,9-9:17,11,0,2:9,17:6,1|8,1:188.881:366.612,131.36:0.0,0.0:1.12396e-34,5.29395e-05,0.999949	0/0:32:0.999832:9,9:8-9,8-9:23,7,0,2:8,2|9,21:6,1|9,1:179.499:326.675,113.385:0.195027,0.195027:0.0,0.000174119,0.999827
-chr1	9601375	.	AAGAAAGAAAGAAAGAAAGA	AAGAAAGAAAGAAAGAAAGAAAGA	.	.	END=9601394;RU=aaga;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.999322:6,6:6-6,6-6:14,10,0,4:6,14:2,1|4,1|5,2:177.803:366.612,131.36:0.0,0.0:0.0,6.95015e-05,0.999933	0/0:25:0.999919:5,5:5-5,5-5:17,6,0,2:5,17:2,1|4,1:142.303:326.675,113.385:0.0,0.0:1.65e-43,3.54743e-05,0.999964
-chr1	9606362	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9606389;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.936713:13,13:12-13,12-13:15,21,0,8:12,3|13,12:6,1|8,2|10,1|11,2|12,1|13,1:322.203:366.612,131.36:0.390807,0.390807:0.99962,0.000382853,3.60786e-14	0/0:54:0.999707:14,14:14-14,14-14:27,15,0,11:13,4|14,23:6,1|8,1|9,1|11,1|12,3|13,4:351.894:326.675,113.385:0.139319,0.139319:1.02861e-27,0.000300045,0.999704
-chr1	9608925	.	AAAACAAAACAAAACAAAAC	.	.	.	END=9608944;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998729:4,4:4-4,4-4:12,9,0,7:4,12:2,1|3,6:179.669:366.612,131.36:0.0,0.0:8.2591e-41,0.000420259,0.999583	0/0:22:0.999873:4,4:4-4,4-4:16,3,0,3:4,16:2,1|3,2:111.98:326.675,113.385:0.0,0.0:0.0,4.67673e-05,0.999956
-chr1	9611150	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9611195;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.797661:23,23:22-23,22-23:7,22,0,15:23,7:4,1|7,1|9,2|10,1|11,1|16,2|17,2|18,1|19,1|20,1|22,2:357.74:366.612,131.36:0.422855,0.422855:1.38107e-07,0.116839,0.883262	0/0:40:0.994831:23,23:23-24,23-24:13,10,0,15:23,13:4,1|8,1|9,1|10,1|13,1|14,1|16,2|18,2|20,4|22,1:271.859:326.675,113.385:0.344691,0.344691:1.28818e-14,0.00110153,0.9989
-chr1	9612365	.	AAACAAACAAAC	.	.	.	END=9612376;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:33,20,0,0:3,33:NULL:315.123:366.612,131.36:0.0,0.0:0.0,6.36956e-10,1.0	0/0:41:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:257.034:326.675,113.385:0.0,0.0:0.0,1.22239e-06,1.0
-chr1	9615067	.	AAGGAAAGGAAAGGA	.	.	.	END=9615081;RU=aagga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.99992:3,3:3-3,3-3:17,3,0,0:3,17:NULL:97.9314:366.612,131.36:0.0,0.0:0.0,4.50181e-05,0.999956	0/0:20:0.994808:3,3:3-3,3-3:11,9,0,0:3,11:NULL:125.05:326.675,113.385:0.0,0.0:8.87133e-32,0.0033707,0.99664
-chr1	9615435	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9615462;RU=tg;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.691524:19,20:18-20,20-20:10,17,0,14:18,2|19,2|20,6:5,1|6,1|8,1|9,1|10,3|12,2|13,1|14,1|16,1|19,2:319.502:366.612,131.36:0.800696,0.19802:0.0,0.0,1.0	0/0:43:0.988039:14,14:13-14,13-14:17,8,0,16:13,3|14,14:5,2|6,4|7,2|8,1|9,2|10,1|11,2|12,2:282.1:326.675,113.385:0.284901,0.284901:8.18095e-17,0.0116994,0.988324
-chr1	9615830	.	ACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=9615845;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.995308:16,16:16-16,16-16:12,20,0,4:16,12:5,1|6,1|12,1|14,1:265.114:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:41:1.0:8,8:8-8,8-8:25,14,0,0:8,25:NULL:232.466:326.675,113.385:0.0990099,0.0990099:2.2519e-41,6.3841e-07,1.0
-chr1	9618148	.	GTTTTGTGTTTTGTGTTTTGT	.	.	.	END=9618168;RU=gttttgt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999203:3,3:3-3,3-3:14,10,0,0:3,14:NULL:143.662:366.612,131.36:0.0,0.0:3e-44,0.000537251,0.999468	0/0:32:0.999542:3,3:3-3,3-3:15,17,0,0:3,15:NULL:215.623:326.675,113.385:0.0,0.0:0.0,0.000414123,0.99959
-chr1	9618314	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9618343;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.977343:8,17:8-17,17-17:7,13,0,3:8,2|17,5:6,1|8,1|15,1:183.5:366.612,131.36:1.70101,0.0990099:1.20571e-18,1.0,2.71908e-08	0/0:28:0.398018:15,15:6-16,6-16:7,9,0,9:14,2|15,5:4,3|5,2|6,1|7,1|12,2:195.299:326.675,113.385:4.2295,4.2295:1.62833e-05,0.564795,0.435288
-chr1	9622730	.	CCATCCATCCAT	.	.	.	END=9622741;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:19,21,0,0:3,19:NULL:267.1:366.612,131.36:0.0,0.0:0.0,8.51368e-06,0.999994	0/0:39:0.449397:3,3:2-3,2-3:20,17,0,2:2,2|3,18:2,2:263.617:326.675,113.385:0.484441,0.484441:0.0,0.550717,0.449392
-chr1	9623134	.	AAACAAACAAAC	.	.	.	END=9623145;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:27,22,0,0:3,27:NULL:308.672:366.612,131.36:0.0,0.0:0.0,3.99432e-08,1.0	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:247.555:326.675,113.385:0.0,0.0:0.0,1.54894e-07,1.0
-chr1	9626974	.	TGTGTGTGTGTG	.	.	.	END=9626985;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999554:6,6:6-6,6-6:15,12,0,0:6,15:NULL:165.631:366.612,131.36:0.0,0.0:8.9785e-38,0.000244724,0.999758	0/0:22:0.997736:6,6:6-6,6-6:12,8,0,2:6,12:4,2:138.635:326.675,113.385:0.0,0.0:2.33487e-30,0.00106104,0.998944
-chr1	9629064	.	ACACACACACACAC	.	.	.	END=9629077;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999739:7,7:7-7,7-7:15,27,0,0:7,15:NULL:303.9:366.612,131.36:0.0,0.0:1.9304e-36,0.000198213,0.999804	0/0:39:1.00001:7,7:7-7,7-7:22,17,0,0:7,22:NULL:239.609:326.675,113.385:0.0,0.0:0.0,2.05518e-06,1.0
-chr1	9630961	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9630988;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0278896:21,21:21-25,21-25:0,7,0,2:NULL:10,1|17,1:77.7278:366.612,131.36:0.885682,0.885682:0.0,0.0,1.0	0/0:20:0.911054:14,14:12-15,12-15:8,7,0,2:14,8:8,1|13,1:116.934:326.675,113.385:0.670203,0.670203:4.68467e-11,0.036892,0.963175
-chr1	9632449	.	TATTTATTTATT	.	.	.	END=9632460;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99891:3,3:3-3,3-3:13,18,0,0:3,13:NULL:219.01:366.612,131.36:0.0,0.0:5.5e-44,0.000874406,0.999127	0/0:23:0.999721:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.398:326.675,113.385:0.0,0.0:0.0,0.000167424,0.999834
-chr1	9638514	.	ACATACATACAT	.	.	.	END=9638525;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:24,17,0,0:3,24:NULL:253.993:366.612,131.36:0.0,0.0:0.0,3.71575e-07,1.0	0/0:44:1.0:3,3:3-3,3-3:27,13,0,4:3,27:2,4:249.201:326.675,113.385:0.0,0.0:0.0,1.83583e-08,1.0
-chr1	9640123	.	TAAATAAATAAA	.	.	.	END=9640134;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:69:1.0:3,3:3-3,3-3:48,20,0,0:3,48:NULL:378.221:366.612,131.36:0.0,0.0:0.0,5.36149e-14,1.0	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:334.737:326.675,113.385:0.0,0.0:0.0,9.27498e-09,1.0
-chr1	9643772	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9643803;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:43:0.99998:17,18:17-17,18-18:21,14,0,6:16,2|17,11|18,8:6,1|10,1|11,1|14,1|16,1|18,1:283.602:366.612,131.36:0.220506,0.0990099:0.0,1.0533e-10,1.0	1/0:35:0.76529:14,16:10-16,16-16:14,11,0,8:13,2|14,2|15,2|16,8:5,1|7,1|8,1|10,1|11,1|12,1|13,1|14,1:240.834:326.675,113.385:1.4234,0.60323:8.8141e-09,0.975704,0.0243449
-chr1	9646643	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=9646702;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.255423:14,14:9-14,9-14:3,12,0,6:14,3:3,1|5,1|6,1|7,1|8,1|13,1:164.828:366.612,131.36:1.61079,1.61079:0.876379,0.123719,5.4977e-07	0/2:18:0.314643:15,17:15-15,15-20:5,7,0,6:15,5:4,1|6,1|7,1|12,1|14,1|17,1:138.479:326.675,113.385:0.0,1.42485:3.16289e-17,5.02754e-08,1.0
-chr1	9647869	.	AAAACAAAACAAAAC	.	.	.	END=9647883;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999978:3,3:3-3,3-3:19,19,0,0:3,19:NULL:252.99:366.612,131.36:0.0,0.0:0.0,3.05267e-05,0.999971	0/0:42:1.0:3,3:3-3,3-3:29,13,0,0:3,29:NULL:236.008:326.675,113.385:0.0,0.0:0.0,1.02047e-08,1.0
-chr1	9648036	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9648079;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.521603:27,27:26-27,26-27:4,16,0,20:27,4:7,1|8,2|9,1|12,2|13,2|14,1|15,1|16,3|17,2|19,3|20,2:326.497:366.612,131.36:0.508722,0.508722:0.0,0.0,1.0	0/0:56:0.953332:22,22:21-22,21-22:17,20,0,19:21,5|22,12:5,3|6,1|9,3|10,1|13,1|14,1|15,3|16,1|17,1|18,1|19,1|21,1|22,1:429.358:326.675,113.385:0.298675,0.298675:1.24157e-18,0.0456814,0.954391
-chr1	9648525	.	AACAACAACAACAAC	.	.	.	END=9648539;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:5,5:5-5,5-5:25,18,0,3:5,25:4,3:283.272:366.612,131.36:0.139319,0.139319:0.0,1.49358e-07,1.0	0/0:31:0.999979:5,5:5-5,5-5:18,11,0,2:5,18:4,2:186.423:326.675,113.385:0.0,0.0:0.0,1.53856e-05,0.999986
-chr1	9649233	.	AGCAGCAGCAGCAGCAGC	.	.	.	END=9649250;RU=agc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:210.823:366.612,131.36:0.0,0.0:0.0,9.54899e-09,1.0	0/0:33:1.0:6,6:6-6,6-6:24,5,0,4:6,24:5,4:171.0:326.675,113.385:0.0,0.0:0.0,1.31746e-07,1.0
-chr1	9649872	.	AGACAGACAGAC	.	.	.	END=9649883;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999951:3,3:3-3,3-3:17,15,0,0:3,17:NULL:206.542:366.612,131.36:0.0,0.0:0.0,3.27145e-05,0.999971	0/0:40:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:246.077:326.675,113.385:0.0,0.0:0.0,1.99257e-06,1.0
-chr1	9650822	.	AGGCAGGCAGGC	.	.	.	END=9650833;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:252.446:366.612,131.36:0.0,0.0:0.0,6.37642e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:241.716:326.675,113.385:0.0,0.0:0.0,2.43994e-08,1.0
-chr1	9653697	.	AATTAATTAATT	.	.	.	END=9653708;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:163.635:366.612,131.36:0.0,0.0:0.0,5.9558e-06,0.999995	0/0:35:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:210.987:326.675,113.385:0.0,0.0:0.0,1.87657e-06,1.0
-chr1	9654181	.	ACACACACACACACAC	.	.	.	END=9654196;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:8,8:6-8,6-8:23,15,0,2:8,23:5,1|6,1:243.973:366.612,131.36:0.451337,0.451337:2.0842e-41,1.49445e-06,1.0	0/0:39:0.998193:8,8:8-9,8-9:29,6,0,4:8,26|9,3:5,2|6,1|7,1:220.67:326.675,113.385:0.345543,0.345543:0.0,1.40534e-08,1.0
-chr1	9654418	.	TGTTTGTTTGTT	.	.	.	END=9654429;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:27,24,0,0:3,27:NULL:331.579:366.612,131.36:0.0,0.0:0.0,9.52743e-08,1.0	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:246.432:326.675,113.385:0.0,0.0:0.0,3.09154e-07,1.0
-chr1	9657317	.	TAGGTAGGTAGGTAGG	.	.	.	END=9657332;RU=tagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999952:4,4:4-4,4-4:18,13,0,0:4,18:NULL:197.062:366.612,131.36:0.0,0.0:0.0,5.66923e-05,0.999947	0/0:29:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:158.96:326.675,113.385:0.0,0.0:0.0,3.75096e-06,1.0
-chr1	9657503	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=9657520;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999909:9,9:9-10,9-10:17,11,0,3:9,17:6,1|8,2:198.971:366.612,131.36:0.169767,0.169767:6.39357e-30,4.71416e-05,0.999955	0/0:32:0.9955:9,9:8-10,8-10:22,5,0,4:8,2|9,18|10,2:5,2|8,2:180.788:326.675,113.385:0.487064,0.487064:2.29285e-31,0.000320013,0.999682
-chr1	9657524	.	GACAGACAGACA	.	.	.	END=9657535;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-4,3-4:21,10,0,2:3,21:2,2:193.092:366.612,131.36:0.334882,0.334882:0.0,1.46363e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:23,5,0,2:3,23:2,2:150.605:326.675,113.385:0.0,0.0:0.0,3.26794e-07,1.0
-chr1	9658926	.	CCCACCCCCACCCCCACC	.	.	.	END=9658943;RU=cccacc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.902147:3,3:3-3,3-3:7,25,0,0:3,7:NULL:252.469:366.612,131.36:0.278639,0.278639:4.55821e-21,0.0822109,0.917883	0/0:27:0.951281:3,3:3-3,3-3:8,19,0,0:3,8:NULL:214.396:326.675,113.385:0.19802,0.19802:5.9391e-24,0.0431802,0.95689
-chr1	9659382	.	GGTTGGTTGGTTGGTT	.	.	.	END=9659397;RU=ggtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:25,21,0,5:4,25:2,1|3,4:322.734:366.612,131.36:0.0,0.0:0.0,1.41532e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:235.149:326.675,113.385:0.0,0.0:0.0,8.22004e-08,1.0
-chr1	9660032	.	AATTAATTAATT	AATTAATT	.	.	END=9660043;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:17:1.0:2,3:2-3,1-3:4,13,0,0:2,2|3,2:NULL:139.697:366.612,131.36:0.309,0.439006:2.25175e-06,1.0,1.67431e-06	0/0:12:0.962574:3,3:3-3,3-3:8,4,0,0:3,8:NULL:69.585:326.675,113.385:0.0,0.0:3.78813e-27,0.0192602,0.980778
-chr1	9661858	.	TATTTATTTATT	.	.	.	END=9661869;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:223.698:366.612,131.36:0.0,0.0:0.0,2.98853e-06,1.0	0/0:33:0.999909:3,3:3-3,3-3:16,13,0,4:3,16:2,4:212.817:326.675,113.385:0.0,0.0:0.0,5.11926e-05,0.999949
-chr1	9663095	.	CTTCTTCTTCTTCTT	.	.	.	END=9663109;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:4-5,4-5:20,8,0,3:5,20:3,1|4,2:176.232:366.612,131.36:0.169767,0.169767:0.0,3.18149e-06,1.0	0/0:37:1.00001:5,5:5-5,5-5:21,16,0,0:5,21:NULL:225.4:326.675,113.385:0.0,0.0:0.0,3.45165e-06,1.0
-chr1	9667084	.	GTGGGTGGGTGG	.	.	.	END=9667095;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:21,18,0,2:3,21:2,2:262.453:366.612,131.36:0.0,0.0:0.0,1.76325e-06,1.0	0/0:64:1.0:3,3:3-3,3-3:45,16,0,3:3,45:2,3:346.008:326.675,113.385:0.0,0.0:0.0,9.71045e-14,1.0
-chr1	9670565	.	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	.	.	END=9670612;RU=agagac;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.993949:9,9:9-9,9-9:10,23,0,11:9,10:3,1|4,2|5,2|6,2|7,2|8,2:338.596:366.612,131.36:0.0,0.0:0.0,0.00211497,0.99789	0/0:47:0.999883:8,8:8-8,8-8:16,20,0,11:8,16:2,1|3,2|4,4|5,1|7,3:323.809:326.675,113.385:0.0,0.0:1e-45,8.4119e-05,0.999918
-chr1	9671049	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9671068;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:21,10,0,8:4,21:2,2|3,6:229.649:366.612,131.36:0.0,0.0:0.0,1.28719e-06,1.0	0/0:28:0.999895:4,4:4-4,4-4:16,8,0,4:4,16:3,4:168.625:326.675,113.385:0.0,0.0:0.0,5.65325e-05,0.999947
-chr1	9677855	.	AATTAATTAATT	.	.	.	END=9677866;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.980491:3,3:3-3,3-3:9,13,0,0:3,9:NULL:154.314:366.612,131.36:0.0,0.0:7.7152e-31,0.0108427,0.98918	0/0:24:0.999993:3,3:3-3,3-3:19,5,0,0:3,19:NULL:121.778:326.675,113.385:0.0,0.0:0.0,1.26746e-05,0.999987
-chr1	9679931	.	TTAATTAATTAA	.	.	.	END=9679942;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:170.439:366.612,131.36:0.0,0.0:0.0,1.05695e-05,0.999993	0/0:23:0.999972:3,3:3-3,3-3:18,5,0,0:3,18:NULL:119.233:326.675,113.385:0.0,0.0:0.0,2.05989e-05,0.999979
-chr1	9680037	.	AAATAAATAAAT	.	.	.	END=9680048;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:161.662:366.612,131.36:0.0,0.0:0.0,2.71179e-06,1.0	0/0:15:0.920147:3,3:3-3,3-3:7,8,0,0:3,7:NULL:101.501:326.675,113.385:0.0,0.0:1.12079e-23,0.0432247,0.956847
-chr1	9682805	.	TTTGTTTTGTTTTGT	.	.	.	END=9682819;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:290.035:366.612,131.36:0.0,0.0:0.0,7.31982e-06,0.999994	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:212.141:326.675,113.385:0.0,0.0:0.0,9.4052e-07,1.0
-chr1	9683361	.	AAAACAAAACAAAAC	.	.	.	END=9683375;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:196.245:366.612,131.36:0.0,0.0:0.0,1.84855e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:256.143:326.675,113.385:0.0,0.0:0.0,5.61949e-08,1.0
-chr1	9687633	.	TCTTCTTCTTCT	.	.	.	END=9687644;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:4-4,4-4:31,21,0,2:4,31:3,2:326.845:366.612,131.36:0.0,0.0:0.0,2.87601e-09,1.0	0/0:44:1.0:4,4:4-4,4-4:20,22,0,2:4,20:3,2:285.82:326.675,113.385:0.0,0.0:0.0,6.53391e-06,0.999994
-chr1	9687930	.	CAACAACAACAACAA	.	.	.	END=9687944;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:5,5:5-5,5-5:20,15,0,2:5,20:4,2:235.364:366.612,131.36:0.0,0.0:0.0,4.26737e-06,0.999995	0/0:31:1.00001:5,5:5-5,5-5:22,7,0,2:5,22:4,2:168.444:326.675,113.385:0.0,0.0:0.0,1.00261e-06,1.0
-chr1	9688759	.	ATTATTATTATT	.	.	.	END=9688770;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999995:4,4:4-4,4-4:20,19,0,0:4,20:NULL:251.938:366.612,131.36:0.0,0.0:0.0,1.41438e-05,0.999987	0/0:33:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:181.887:326.675,113.385:0.0,0.0:0.0,1.26347e-06,1.0
-chr1	9688938	.	TTTGTTTGTTTG	.	.	.	END=9688949;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.991918:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.402:366.612,131.36:0.0,0.0:7.14483e-34,0.00501164,0.995002	0/0:34:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:193.646:326.675,113.385:0.0,0.0:0.0,1.62571e-06,1.0
-chr1	9689761	.	ACACACACACACACACACAC	.	.	.	END=9689780;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:0.999987:10,10:10-10,10-10:26,21,0,5:9,2|10,24:5,2|7,1|8,1|9,1:350.776:366.612,131.36:0.0990099,0.0990099:2.1023e-36,1.42608e-05,0.999987	0/0:57:0.999991:10,10:10-10,10-10:32,12,0,12:9,2|10,28|11,2:4,1|5,2|6,4|7,4|9,1:354.602:326.675,113.385:0.430892,0.430892:2.5e-44,2.95574e-07,1.0
-chr1	9691108	.	ATTTATTTATTT	.	.	.	END=9691119;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999878:3,3:3-3,3-3:16,10,0,0:3,16:NULL:149.003:366.612,131.36:0.0,0.0:0.0,6.04867e-05,0.999941	0/0:19:0.999853:3,3:3-3,3-3:16,3,0,0:3,16:NULL:89.7674:326.675,113.385:0.0,0.0:0.0,6.84543e-05,0.999933
-chr1	9691851	.	AGTAAGTAAGTAAGTA	.	.	.	END=9691866;RU=agta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:4,4:4-4,4-4:22,17,0,5:4,22:3,5:279.691:366.612,131.36:0.0,0.0:0.0,5.4925e-07,1.0	0/0:31:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:177.721:326.675,113.385:0.0,0.0:0.0,4.7318e-06,0.999995
-chr1	9694314	.	ATACATACATAC	.	.	.	END=9694325;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:219.473:366.612,131.36:0.0,0.0:0.0,1.13225e-06,1.0	0/0:38:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:208.619:326.675,113.385:0.0,0.0:0.0,7.87691e-08,1.0
-chr1	9695885	.	AAATAAATAAAT	.	.	.	END=9695896;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-4,3-4:20,20,0,3:3,20:2,3:284.861:366.612,131.36:0.345543,0.345543:0.0,6.69801e-06,0.999994	0/0:34:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:201.333:326.675,113.385:0.0,0.0:0.0,3.61883e-06,1.0
-chr1	9696536	.	AAATAAATAAAT	.	.	.	END=9696547;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:306.625:366.612,131.36:0.0,0.0:0.0,6.52315e-10,1.0	0/0:25:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:122.673:326.675,113.385:0.0,0.0:0.0,5.87155e-06,0.999995
-chr1	9699257	.	ACAACAACAACA	.	.	.	END=9699268;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:152.568:366.612,131.36:0.0,0.0:0.0,1.1249e-06,1.0	0/0:39:1.0:4,4:4-4,4-4:25,11,0,3:4,25:3,3:222.319:326.675,113.385:0.0,0.0:0.0,1.11363e-07,1.0
-chr1	9703468	.	AAACAAACAAAC	.	.	.	END=9703479;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999994:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.066:366.612,131.36:0.0,0.0:0.0,1.17266e-05,0.999987	0/0:19:0.996173:3,3:3-3,3-3:11,6,0,2:3,11:2,2:112.545:326.675,113.385:0.0,0.0:4.16261e-36,0.00136399,0.998641
-chr1	9703640	.	TTGTTGTTGTTG	.	.	.	END=9703651;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:234.651:366.612,131.36:0.0,0.0:0.0,1.66171e-06,1.0	0/0:25:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:125.859:326.675,113.385:0.0,0.0:0.0,9.80125e-06,0.999993
-chr1	9704060	.	TGGTTTTGGTTTTGGTTT	.	.	.	END=9704077;RU=tggttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999932:3,3:3-3,3-3:17,13,0,0:3,17:NULL:184.213:366.612,131.36:0.0,0.0:0.0,5.85795e-05,0.999941	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.201:326.675,113.385:0.0,0.0:0.0,5.56269e-06,0.999995
-chr1	9705815	.	GTTTGTTTGTTTGTTT	.	.	.	END=9705830;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.674159:4,4:2-4,2-4:5,15,0,0:4,5:NULL:158.217:366.612,131.36:0.477306,0.477306:2.98968e-17,0.236009,0.764015	0/0:26:0.999993:4,4:4-4,4-4:19,7,0,0:4,19:NULL:141.001:326.675,113.385:0.0,0.0:0.0,1.56908e-05,0.999986
-chr1	9710499	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=9710522;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.998341:4,4:4-4,4-4:12,12,0,4:4,12:3,4:185.253:366.612,131.36:0.0,0.0:0.999477,0.000525053,2.34701e-38	0/0:28:0.999938:6,6:6-6,6-6:18,7,0,3:6,18:2,2|3,1:160.473:326.675,113.385:0.0,0.0:0.0,4.24882e-05,0.999957
-chr1	9710692	.	TTTGTTTGTTTG	.	.	.	END=9710703;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99993:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.914:366.612,131.36:0.0,0.0:0.0,3.98414e-05,0.999963	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:139.644:326.675,113.385:0.0,0.0:0.0,4.75786e-06,0.999995
-chr1	9710885	.	ATTTATTTATTTATTT	.	.	.	END=9710900;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.71043:4,4:3-4,3-4:5,17,0,4:4,5:2,2|3,2:205.355:366.612,131.36:0.253975,0.253975:2.75459e-15,0.174742,0.825328	0/0:28:0.999157:4,4:4-4,4-4:13,10,0,5:4,13:3,5:177.402:326.675,113.385:0.0,0.0:4.21589e-40,0.000347666,0.999653
-chr1	9712334	.	TAAATAAATAAATAAATAAA	.	.	.	END=9712353;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999998:5,5:5-5,5-5:18,14,0,6:5,18:3,1|4,5:247.198:366.612,131.36:0.0,0.0:2.5e-44,1.03477e-05,0.999993	0/0:22:0.991102:5,5:5-5,5-5:10,10,0,2:5,10:4,2:149.796:326.675,113.385:0.0,0.0:1.02584e-24,0.00490215,0.995108
-chr1	9712678	.	TGTATGTATGTA	.	.	.	END=9712689;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:27,24,0,0:3,27:NULL:331.077:366.612,131.36:0.0,0.0:0.0,4.25356e-08,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.328:326.675,113.385:0.0,0.0:0.0,6.61577e-07,1.0
-chr1	9712838	.	GGCTGGCTGGCT	.	.	.	END=9712849;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:3,3:3-3,3-3:21,25,0,3:3,21:2,3:333.27:366.612,131.36:0.0,0.0:0.0,1.0754e-06,1.0	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:160.56:326.675,113.385:0.0,0.0:0.0,2.80029e-06,1.0
-chr1	9713883	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9713918;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.783324:29,30:29-30,29-30:5,16,0,21:29,2|30,3:4,1|5,1|6,1|8,1|9,2|10,1|12,1|13,1|14,1|15,1|16,1|18,1|19,4|24,1|25,1|27,1|28,1:338.818:366.612,131.36:0.582057,0.585081:0.0,0.0,1.0	0/0:35:0.634928:18,18:17-18,17-18:11,11,0,13:17,3|18,8:6,2|8,1|10,1|11,2|12,1|13,1|14,2|16,2|18,1:256.984:326.675,113.385:0.45695,0.45695:1.01629e-14,0.360848,0.639196
-chr1	9719437	.	TAAATAAATAAA	.	.	.	END=9719448;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:29,21,0,2:3,29:2,2:321.514:366.612,131.36:0.0,0.0:0.0,7.19871e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.708:326.675,113.385:0.0,0.0:0.0,3.85455e-07,1.0
-chr1	9725821	.	AAACAAACAAACAAACAAAC	.	.	.	END=9725840;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.98873:5,5:5-5,5-5:10,9,0,0:5,10:NULL:120.746:366.612,131.36:0.0,0.0:6.68574e-36,0.00721016,0.992806	0/0:26:0.999871:5,5:5-5,5-5:16,5,0,5:5,16:2,2|3,1|4,2:147.576:326.675,113.385:0.0,0.0:0.0,5.49581e-05,0.999948
-chr1	9725879	.	AATAAATAAATA	AATAAATAAATAAATA	.	.	END=9725890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.541156:4,4:3-4,3-4:4,12,0,0:4,4:NULL:121.68:366.612,131.36:0.326282,0.326282:8.05336e-16,0.185431,0.814632	0/0:23:0.999126:3,3:3-3,3-3:13,8,0,2:3,13:2,2:138.552:326.675,113.385:0.0,0.0:2.34e-43,0.000423082,0.999582
-chr1	9726064	.	ACAACAACAACA	.	.	.	END=9726075;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999299:4,4:4-4,4-4:14,4,0,0:4,14:NULL:90.4591:366.612,131.36:0.0,0.0:0.0,0.00034447,0.999659	0/0:27:0.999997:4,4:4-4,4-4:18,6,0,3:4,18:3,3:146.303:326.675,113.385:0.0,0.0:0.0,1.10421e-05,0.999993
-chr1	9726319	.	GAAAGAAAGAAA	.	.	.	END=9726330;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999389:3,3:3-3,3-3:14,15,0,0:3,14:NULL:187.761:366.612,131.36:0.0,0.0:0.0,0.000348747,0.999652	0/0:31:0.999991:3,3:3-3,3-3:18,11,0,2:3,18:2,2:185.272:326.675,113.385:0.0,0.0:0.0,1.32864e-05,0.999987
-chr1	9726354	.	TATTTATTTATT	.	.	.	END=9726365;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999407:3,3:3-3,3-3:14,13,0,0:3,14:NULL:170.997:366.612,131.36:0.0,0.0:8.671e-42,0.000330732,0.999673	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:204.567:326.675,113.385:0.0,0.0:0.0,1.8859e-06,1.0
-chr1	9727029	.	AAAACAAAACAAAACAAAAC	AAAAC	.	.	END=9727048;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.147142:1,1:1-3,1-3:0,29,0,0:NULL:NULL:260.807:366.612,131.36:0.611622,0.611622:0.774622,0.214201,0.0112283	0/0:45:1.0:4,4:4-4,4-4:23,17,0,5:4,23:2,1|3,4:276.386:326.675,113.385:0.0,0.0:0.0,2.68601e-07,1.0
-chr1	9728119	.	TTGTTGTTGTTG	.	.	.	END=9728130;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999633:4,4:4-4,4-4:15,17,0,0:4,15:NULL:213.604:366.612,131.36:0.0,0.0:0.0,0.000271032,0.999729	0/0:23:0.999951:4,4:4-4,4-4:18,5,0,0:4,18:NULL:116.76:326.675,113.385:0.0,0.0:0.0,3.20147e-05,0.999971
-chr1	9728313	.	ATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9728330;RU=at;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.821532:25,25:25-25,25-25:6,8,0,0:25,6:NULL:104.497:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:19:0.673641:9,9:9-10,9-10:5,13,0,0:9,5:NULL:142.839:326.675,113.385:0.603392,0.603392:1.10353e-05,0.188155,0.8119
-chr1	9729577	.	TTGTTGTTGTTG	.	.	.	END=9729588;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:4,4:4-4,4-4:24,0,0,0:4,24:NULL:93.8005:366.612,131.36:0.0,0.0:0.0,3.61953e-07,1.0	0/0:46:1.0:4,4:4-4,4-4:28,15,0,3:4,28:3,3:269.199:326.675,113.385:0.0,0.0:0.0,1.38348e-08,1.0
-chr1	9729594	.	ATTTATTTATTTATTT	.	.	.	END=9729609;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:29,0,0,0:4,29:NULL:114.501:366.612,131.36:0.0,0.0:0.0,1.14181e-08,1.0	0/0:46:1.0:4,4:3-4,3-4:27,15,0,3:4,27:3,3:267.498:326.675,113.385:0.169767,0.169767:0.0,3.26584e-08,1.0
-chr1	9730050	.	TGTGTGTGTGTGTGTG	.	.	.	END=9730065;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:73:1.0:8,8:8-8,8-8:45,20,0,6:8,45:5,2|6,2|7,1|8,1:410.914:366.612,131.36:0.0,0.0:0.0,1.52131e-13,1.0	0/0:69:1.0:8,8:8-8,8-8:45,15,0,5:8,45:5,1|6,1|7,3:360.851:326.675,113.385:0.835916,0.835916:0.0,1.68201e-13,1.0
-chr1	9730553	.	AGGAGGAGGAGG	.	.	.	END=9730564;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999248:4,4:4-4,4-4:15,23,0,0:4,15:NULL:283.987:366.612,131.36:0.0,0.0:0.0,0.000659289,0.999346	0/0:38:1.0:4,4:4-4,4-4:20,18,0,0:4,20:NULL:241.989:326.675,113.385:0.0,0.0:0.0,9.69816e-06,0.999993
-chr1	9730578	.	GAGGGAGGGAGG	.	.	.	END=9730589;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:23,18,0,3:3,23:2,3:288.801:366.612,131.36:0.0,0.0:0.0,1.09775e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:240.53:326.675,113.385:0.0,0.0:0.0,1.10364e-07,1.0
-chr1	9731162	.	AAAATAAAATAAAAT	.	.	.	END=9731176;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:24,23,0,3:3,24:2,3:324.123:366.612,131.36:0.0,0.0:0.0,4.06907e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:205.696:326.675,113.385:0.0,0.0:0.0,1.97209e-08,1.0
-chr1	9732554	.	AATAATAATAAT	.	.	.	END=9732565;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999678:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.542:366.612,131.36:0.0,0.0:0.0,0.000186926,0.999818	0/0:36:1.0:4,4:4-4,4-4:24,10,0,2:4,24:3,2:202.029:326.675,113.385:0.0,0.0:0.0,2.81655e-07,1.0
-chr1	9733417	.	ACACACACACACACAC	.	.	.	END=9733432;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.994154:8,8:7-9,7-9:18,13,0,0:7,2|8,16:NULL:194.667:366.612,131.36:0.385503,0.385503:4.85808e-28,0.00585527,0.994159	0/0:39:1.0:8,8:8-8,8-8:19,13,0,6:8,19:4,1|5,2|7,3:237.836:326.675,113.385:0.0990099,0.0990099:2.27551e-36,5.86533e-06,0.999995
-chr1	9736402	.	GGGTGGGTGGGT	.	.	.	END=9736413;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999623:3,3:3-3,3-3:15,29,0,0:3,15:NULL:326.54:366.612,131.36:0.0,0.0:4.575e-42,0.000206288,0.999796	0/0:44:0.997205:3,3:3-3,3-3:13,31,0,0:3,13:NULL:332.866:326.675,113.385:0.0,0.0:1.49104e-35,0.00244273,0.997564
-chr1	9736710	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGT	.	.	END=9736727;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:1.0:7,7:7-7,7-7:33,27,0,2:7,31|8,2:5,1|6,1:407.127:366.612,131.36:0.0,0.0:1.0,1.6412e-09,0.0	0/0:61:1.0:9,9:9-9,9-9:36,17,0,8:8,2|9,32|10,2:5,6|6,1|9,1:382.691:326.675,113.385:0.0,0.0:0.0,1.24426e-07,1.0
-chr1	9740263	.	TTTGTTTGTTTGTTTG	.	.	.	END=9740278;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999301:4,4:4-4,4-4:13,18,0,3:4,13:3,3:232.383:366.612,131.36:0.0,0.0:1.078e-42,0.000389996,0.999613	0/0:41:1.0:4,4:4-4,4-4:27,10,0,4:4,27:3,4:231.344:326.675,113.385:0.0,0.0:0.0,2.00338e-08,1.0
-chr1	9740932	.	AATAAATAAATA	.	.	.	END=9740943;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.990468:3,3:1-3,1-3:10,11,0,0:3,10:NULL:135.689:366.612,131.36:0.998774,0.998774:3.04931e-29,0.00513869,0.994874	0/0:24:0.999148:3,3:3-3,3-3:13,9,0,2:3,13:2,2:143.419:326.675,113.385:0.0,0.0:8.42605e-38,0.000372926,0.999629
-chr1	9741427	.	ATATATATATATAT	.	.	.	END=9741440;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.834358:7,7:6-7,6-7:15,10,0,0:6,2|7,13:NULL:155.991:366.612,131.36:0.419363,0.419363:2.42473e-16,0.16554,0.83453	0/0:23:0.98283:7,7:6-7,6-7:9,11,0,2:7,9:6,2:152.903:326.675,113.385:0.40582,0.40582:9.70936e-14,0.00935361,0.990665
-chr1	9742971	.	ACACACACACACACACACACACACACAC	.	.	.	END=9742998;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.260718:14,14:14-18,14-18:3,2,0,0:14,3:NULL:31.2034:366.612,131.36:1.68637,1.68637:4.67353e-05,0.219261,0.780736	0/0:16:0.673437:14,14:6-14,6-14:10,0,0,5:13,3|14,7:6,1|8,1|11,1|12,1|14,1:88.1707:326.675,113.385:3.81398,3.81398:2.73843e-15,0.316227,0.683785
-chr1	9743019	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9743048;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:7:0.268864:19,19:19-20,19-20:2,1,0,4:19,2:13,1|14,1|17,1|18,1:50.6647:366.612,131.36:0.317759,0.317759:0.0,0.0,1.0	1/0:6:0.714264:14,15:14-15,14-15:4,0,0,2:14,2|15,2:5,1|11,1:35.4905:326.675,113.385:0.492866,0.323567:0.0133686,0.802258,0.184464
-chr1	9743703	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	END=9743732;RU=tcttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.98728:8,8:6-8,6-8:11,8,0,0:8,11:NULL:122.033:366.612,131.36:0.874432,0.874432:1.207e-42,0.00771628,0.992303	0/0:31:0.999756:6,6:6-6,6-6:15,12,0,4:6,15:3,1|4,1|5,2:199.947:326.675,113.385:0.0,0.0:0.0,0.00014613,0.999857
-chr1	9743909	.	AAAACAAAACAAAAC	.	.	.	END=9743923;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999971:3,3:3-3,3-3:18,20,0,0:3,18:NULL:255.789:366.612,131.36:0.0,0.0:0.0,4.0055e-05,0.999963	0/0:45:1.0:3,3:3-3,3-3:31,14,0,0:3,31:NULL:250.64:326.675,113.385:0.0,0.0:0.0,5.20746e-09,1.0
-chr1	9748068	.	GCCGCCGCCGCC	.	.	.	END=9748079;RU=gcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,17,0,0:4,26:NULL:257.092:366.612,131.36:0.0,0.0:0.0,1.47759e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:22,19,0,0:4,22:NULL:267.859:326.675,113.385:0.0,0.0:0.0,4.34809e-06,0.999995
-chr1	9748275	.	TCCTCCTCCTCC	.	.	.	END=9748286;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:27,18,0,0:4,27:NULL:270.516:366.612,131.36:0.0,0.0:0.0,8.17244e-08,1.0	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:288.438:326.675,113.385:0.0,0.0:0.0,4.31425e-09,1.0
-chr1	9748387	.	CACTCACTCACT	.	.	.	END=9748398;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999851:3,3:3-3,3-3:16,21,0,2:3,16:2,2:268.385:366.612,131.36:0.0,0.0:0.0,0.000101391,0.999902	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:197.561:326.675,113.385:0.0,0.0:0.0,7.43655e-08,1.0
-chr1	9749147	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=9749162;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.284783:4,5:4-4,4-8:15,6,0,2:4,15:2,1|5,1:139.489:366.612,131.36:0.0,0.954612:0.0,4.00039e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:21,11,0,0:4,21:NULL:188.623:326.675,113.385:0.0,0.0:0.0,4.79595e-06,0.999995
-chr1	9749755	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG	.	.	END=9749786;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.99473:11,11:11-11,11-11:12,8,0,0:11,12:NULL:125.418:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:26:0.507991:16,16:15-17,15-17:9,6,0,10:15,2|16,7:6,1|10,2|14,2|15,5:180.248:326.675,113.385:0.606956,0.606956:3.50875e-07,0.483237,0.516843
-chr1	9750225	.	AGTAGTAGTAGT	.	.	.	END=9750236;RU=agt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:21,24,0,0:4,21:NULL:298.024:366.612,131.36:0.0,0.0:0.0,5.6266e-06,0.999995	0/0:29:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:149.83:326.675,113.385:0.0,0.0:0.0,2.38812e-06,1.0
-chr1	9752253	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9752286;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.997256:17,17:17-17,17-17:17,17,0,16:16,2|17,15:5,1|6,1|7,1|9,1|10,1|12,2|13,2|14,1|15,3|16,3:365.646:366.612,131.36:0.139319,0.139319:8.89801e-17,0.00262498,0.997382	0/1:53:0.277617:17,28:17-17,17-29:20,13,0,20:16,2|17,15|18,3:4,1|5,1|6,4|9,1|10,3|11,3|12,1|16,2|17,1|22,1|25,1|27,1:398.995:326.675,113.385:0.0,3.61678:9.044e-42,3.50049e-19,1.0
-chr1	9754367	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9754416;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:57:0.990223:27,27:27-27,27-27:13,19,0,23:27,13:4,2|5,1|6,1|8,1|11,1|12,1|13,1|16,2|17,3|18,2|19,1|20,2|21,2|23,2|25,1:420.448:366.612,131.36:0.0,0.0:3.55007e-33,0.00110758,0.998898	0/0:44:0.998768:25,25:20-25,20-25:18,8,0,15:24,2|25,16:6,1|7,1|10,1|12,1|13,1|14,1|15,2|20,2|21,2|22,1|24,2:282.635:326.675,113.385:1.19347,1.19347:5.59785e-17,0.000549827,0.999453
-chr1	9755337	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9755366;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:25:0.0259109:21,38:18-38,18-40:0,11,0,14:NULL:5,1|8,1|9,1|10,1|11,1|13,1|14,1|15,2|18,3|20,1|38,1:208.402:366.612,131.36:6.23399,8.69789:0.0,0.00387329,0.996135	0/1:40:0.28343:15,18:15-15,14-21:15,14,0,10:14,3|15,12:7,2|8,2|11,1|13,1|14,2|15,1|18,1:292.839:326.675,113.385:0.0,2.01937:2.47547e-24,2.57404e-05,0.999978
-chr1	9755657	.	TTGTTTGTTTGT	.	.	.	END=9755668;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:186.489:366.612,131.36:0.0,0.0:0.0,3.11925e-07,1.0	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.226:326.675,113.385:0.0,0.0:0.0,1.51129e-08,1.0
-chr1	9756639	.	TACATACATACA	.	.	.	END=9756650;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.966555:3,3:3-3,3-3:8,6,0,0:3,8:NULL:87.5348:366.612,131.36:0.0,0.0:9.22639e-24,0.0144593,0.985571	0/0:25:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:130.067:326.675,113.385:0.0,0.0:0.0,1.92148e-05,0.99998
-chr1	9757162	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9757199;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.627552:20,20:20-20,20-20:4,16,0,13:20,4:7,1|10,1|11,3|12,2|14,1|16,1|17,2|18,1|20,1:268.773:366.612,131.36:0.0,0.0:1.04652e-15,0.0540829,0.946001	0/0:39:0.810248:19,19:17-19,17-19:18,9,0,10:17,2|18,4|19,12:6,1|8,1|10,2|11,1|12,1|15,1|16,3:255.456:326.675,113.385:0.725682,0.725682:5.86452e-12,0.18951,0.81055
-chr1	9758381	.	GAGGGAGGGAGG	.	.	.	END=9758392;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999043:3,3:3-3,3-3:13,17,0,3:3,13:2,3:233.894:366.612,131.36:0.0,0.0:9.2e-44,0.000391643,0.999613	0/0:20:0.999413:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.155:326.675,113.385:0.0,0.0:0.0,0.000297211,0.999705
-chr1	9760350	.	TCTGTCTGTCTG	.	.	.	END=9760361;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999711:3,3:3-3,3-3:15,11,0,0:3,15:NULL:162.063:366.612,131.36:0.0,0.0:0.0,0.000177622,0.999826	0/0:21:0.992456:3,3:3-3,3-3:10,11,0,0:3,10:NULL:145.772:326.675,113.385:0.0,0.0:8.02761e-33,0.00492337,0.995091
-chr1	9762148	.	GCTTGCTTGCTTGCTT	.	.	.	END=9762163;RU=gctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997277:4,4:3-4,3-4:13,11,0,0:4,13:NULL:157.657:366.612,131.36:0.484441,0.484441:7.004e-42,0.00191796,0.998087	0/0:15:0.997053:4,4:4-4,4-4:12,3,0,0:4,12:NULL:72.1752:326.675,113.385:0.0,0.0:3.34431e-39,0.0016027,0.998405
-chr1	9762349	.	ATTTATTTATTT	ATTT	.	.	END=9762360;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:23:0.444967:1,3:1-4,3-4:2,20,0,0:3,2:NULL:212.951:366.612,131.36:1.24587,0.479355:2.66417e-05,0.665763,0.334226	0/0:14:0.86346:3,3:3-3,3-3:6,8,0,0:3,6:NULL:97.6072:326.675,113.385:0.0,0.0:2.96324e-15,0.0753266,0.92477
-chr1	9763714	.	AATAAATAAATAAATA	.	.	.	END=9763729;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999239:4,4:4-4,4-4:14,20,0,2:4,14:3,2:252.735:366.612,131.36:0.0,0.0:1.4954e-40,0.000504567,0.999499	0/0:29:0.999768:4,4:4-4,4-4:16,13,0,0:4,16:NULL:181.07:326.675,113.385:0.0,0.0:0.0,0.000168551,0.999834
-chr1	9763878	.	AAAAACAAAAACAAAAAC	.	.	.	END=9763895;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.964413:3,3:3-3,3-3:8,15,0,2:3,8:2,2:184.52:366.612,131.36:0.0,0.0:7.99829e-27,0.0215309,0.978512	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.123:326.675,113.385:0.0,0.0:0.0,7.80059e-06,0.999994
-chr1	9765363	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9765406;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:22:0.999992:22,26:22-22,22-26:13,7,0,2:22,8|26,5:7,1|18,1:148.74:366.612,131.36:0.0,0.780108:8.05933e-23,2.55888e-10,1.0	1/0:27:0.72604:21,22:21-22,22-22:7,9,0,11:21,2|22,5:6,1|9,1|10,1|11,2|12,2|13,1|17,1|18,1|20,1:202.097:326.675,113.385:0.499387,0.0990099:2.71366e-05,0.744188,0.255792
-chr1	9765415	.	GCGCGCGCGCGCGC	.	.	.	END=9765428;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999862:7,7:6-7,6-7:17,8,0,0:7,17:NULL:142.377:366.612,131.36:0.169767,0.169767:8.93e-43,8.60959e-05,0.999917	0/0:23:0.997911:7,7:7-7,7-7:13,10,0,0:7,13:NULL:140.463:326.675,113.385:0.0,0.0:7.27135e-33,0.000986207,0.99902
-chr1	9770170	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9770189;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999402:10,10:10-11,10-11:14,16,0,5:10,14:6,1|7,1|8,2|9,1:246.55:366.612,131.36:0.322657,0.322657:7.76315e-25,0.000246239,0.999757	0/1:32:0.291365:10,14:10-10,10-14:16,13,0,2:10,16:7,1|13,1:216.461:326.675,113.385:0.0,1.55007:3.90969e-31,1.72145e-07,1.0
-chr1	9770190	.	GCGCGCGCGCGCGCGCGCGC	.	.	.	END=9770209;RU=gc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997553:10,10:10-10,10-10:12,13,0,0:10,12:NULL:169.02:366.612,131.36:0.0,0.0:3.79124e-31,0.00132692,0.998678	0/0:26:0.997978:10,10:10-10,10-10:13,13,0,0:10,13:NULL:176.391:326.675,113.385:0.0,0.0:1.62128e-33,0.00144893,0.998557
-chr1	9770676	.	GCCCAGCCCAGCCCA	.	.	.	END=9770690;RU=gccca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999697:3,3:3-3,3-3:15,18,0,0:3,15:NULL:217.894:366.612,131.36:0.0,0.0:0.0,0.000236184,0.999766	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:174.723:326.675,113.385:0.0,0.0:0.0,2.41586e-07,1.0
-chr1	9771804	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9771841;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:60:0.999998:13,13:13-13,13-13:29,19,0,10:12,3|13,26:5,2|6,2|7,2|8,1|12,3:381.097:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:58:0.979498:19,19:18-19,18-19:24,18,0,16:17,2|18,4|19,18:5,1|6,4|9,1|10,1|11,1|12,2|13,2|16,1|17,2|18,1:414.085:326.675,113.385:0.253975,0.253975:4.98745e-19,0.0205358,0.979505
-chr1	9771917	.	CCACCACCACCACCACCACCA	.	.	.	END=9771937;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:7,7:7-7,7-7:26,15,0,3:7,26:5,2|6,1:261.157:366.612,131.36:0.0,0.0:0.0,7.95077e-08,1.0	0/0:45:1.0:7,7:7-7,7-7:24,16,0,5:7,24:3,1|5,1|6,3:286.844:326.675,113.385:0.0,0.0:0.0,2.22096e-07,1.0
-chr1	9772803	.	TATTTATTTATT	.	.	.	END=9772814;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.9895:3,3:3-3,3-3:10,10,0,0:3,10:NULL:126.035:366.612,131.36:0.0,0.0:6.07052e-30,0.00541532,0.994596	0/0:20:0.999978:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.7298:326.675,113.385:0.0,0.0:0.0,1.57048e-05,0.999986
-chr1	9773234	.	CACTCACTCACTCACTCACTCACT	.	.	.	END=9773257;RU=cact;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:6,6:6-6,6-6:21,14,0,3:6,21:2,1|3,2:237.891:366.612,131.36:0.0,0.0:0.0,7.5556e-06,0.999994	0/0:38:0.999985:6,6:6-6,6-6:18,14,0,6:6,18:3,3|4,3:238.929:326.675,113.385:0.0,0.0:0.0,2.30818e-05,0.999979
-chr1	9773465	.	AGGGAGGGAGGG	.	.	.	END=9773476;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.990242:3,3:3-3,3-3:10,20,0,2:3,10:2,2:240.93:366.612,131.36:0.0,0.0:1.05612e-25,0.00535308,0.994662	0/0:27:0.995156:3,3:3-3,3-3:11,16,0,0:3,11:NULL:188.95:326.675,113.385:0.0,0.0:5.69066e-29,0.00309688,0.996912
-chr1	9775295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9775348;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:50:0.359204:16,31:16-16,16-32:14,18,0,17:16,14:6,2|8,2|9,2|10,2|12,1|13,3|14,3|16,1|31,1:378.404:366.612,131.36:0.0,7.41562:0.000827229,0.999174,0.0	0/2:63:0.420572:27,29:26-27,25-29:10,19,0,32:26,2|27,8:5,2|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,3|16,1|18,1|19,3|21,1|23,1|24,1|26,3|27,1|28,1|29,1:481.528:326.675,113.385:0.363786,0.950392:1.92112e-27,2.60118e-07,1.0
-chr1	9776621	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9776664;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.728612:19,20:18-20,19-20:7,14,0,11:19,3|20,4:6,1|11,1|13,3|15,2|16,1|18,1|19,2:245.307:366.612,131.36:0.482006,0.258566:0.987298,0.0127278,6.95088e-09	3/0:35:0.690203:21,22:21-22,22-22:8,11,0,16:21,4|22,4:6,2|7,1|8,2|11,1|12,2|17,1|18,2|19,1|20,1|21,2|22,1:266.453:326.675,113.385:0.499779,0.0990099:6.32586e-11,0.695356,0.304656
-chr1	9778986	.	GTTTTGTTTTGTTTTGTTTT	GTTTT	.	.	END=9779005;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:28:0.989419:4,4:4-4,4-4:9,15,0,4:4,9:3,4:197.918:326.675,113.385:0.0,0.0:1.9785e-29,0.00514016,0.994873
-chr1	9781279	.	ACACACACACAC	ACACACAC	.	.	END=9781290;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:1.0:4,6:4-4,6-6:23,9,0,2:4,18|6,5:5,2:205.748:366.612,131.36:0.0,0.220506:8.01649e-15,1.0,3.01e-43	0/0:36:1.0:6,6:4-6,4-6:25,8,0,2:6,25:5,2:188.694:326.675,113.385:0.472766,0.472766:0.0,1.46617e-07,1.0
-chr1	9781294	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9781321;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:1.00001:6,6:6-6,6-6:21,10,0,3:6,21:3,1|5,2:198.83:366.612,131.36:0.0,0.0:1.0,3.46571e-06,1.64653e-38	0/0:37:1.0:7,7:7-7,7-7:24,8,0,4:7,24:3,2|6,2:202.003:326.675,113.385:0.0990099,0.0990099:0.0,3.46566e-07,1.0
-chr1	9782765	.	ACACACACACAC	.	.	.	END=9782776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:6,6:6-6,6-6:25,14,0,2:6,25:5,2:240.552:366.612,131.36:0.0,0.0:0.0,1.41851e-07,1.0	0/0:31:0.999979:6,6:6-6,6-6:18,11,0,2:6,18:4,1|5,1:185.59:326.675,113.385:0.0,0.0:5.9746e-41,1.31117e-05,0.999987
-chr1	9783489	.	TTAATTAATTAA	.	.	.	END=9783500;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.931726:3,3:3-3,3-3:7,12,0,0:3,7:NULL:143.564:366.612,131.36:0.0,0.0:1.00431e-22,0.0421595,0.957909	0/0:20:0.977339:3,3:3-3,3-3:9,11,0,0:3,9:NULL:133.384:326.675,113.385:0.0,0.0:7.88699e-29,0.0123908,0.987638
-chr1	9783579	.	TTTTTCTTTTTCTTTTTC	.	.	.	END=9783596;RU=tttttc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:191.105:366.612,131.36:0.0,0.0:0.0,3.26877e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:24,7,0,2:3,24:2,2:172.379:326.675,113.385:0.0,0.0:0.0,2.68502e-07,1.0
-chr1	9784280	.	CACACACACACA	.	.	.	END=9784291;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:6,6:6-6,6-6:48,3,0,10:6,48:5,10:295.928:366.612,131.36:0.0,0.0:0.0,1.23147e-14,1.0	0/0:62:1.0:6,6:6-6,6-6:37,17,0,8:6,37:4,1|5,7:375.86:326.675,113.385:0.0,0.0:0.0,2.25615e-11,1.0
-chr1	9784615	.	GAGGCAGAGGCAGAGGCA	GAGGCAGAGGCA	.	.	END=9784632;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.248705:2,2:2-4,2-4:2,0,0,0:2,2:NULL:7.85465:366.612,131.36:0.930482,0.930482:0.373682,0.62612,0.000254202	0/0:61:0.621118:3,3:2-6,2-6:24,34,0,2:2,3|3,21:2,1|5,1:451.761:326.675,113.385:1.18638,1.18638:0.0,0.0207558,0.979286
-chr1	9784654	.	AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	AGAGGCAGAGAGGCAGAGAGGCAG,AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	.	.	END=9784685;RU=agaggcag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.985133:3,5:3-7,4-7:8,0,0,0:3,3|4,2|5,3:NULL:45.1349:366.612,131.36:1.04922,0.802164:4.22929e-07,0.992433,0.00758428	0/0:52:0.999119:4,4:4-7,4-7:27,21,0,2:4,24|5,3:3,2:334.649:326.675,113.385:0.839777,0.839777:2.4e-44,9.83233e-08,1.0
-chr1	9784706	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=9784741;RU=agaggc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.0278135:1,1:3-3,3-3:0,0,0,0:NULL:NULL:-25.0:366.612,131.36:0.0,0.0:0.694258,0.277978,0.0277995	0/2:40:0.395279:6,8:6-6,6-9:21,13,0,6:6,21:3,2|4,3|8,1:264.25:326.675,113.385:0.0,1.03293:0.0,1.19432e-07,1.0
-chr1	9786376	.	GTTTGGTTTGGTTTG	.	.	.	END=9786390;RU=gtttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999852:3,3:3-3,3-3:16,8,0,0:3,16:NULL:133.565:366.612,131.36:0.0,0.0:0.0,8.14397e-05,0.999919	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:189.598:326.675,113.385:0.0,0.0:0.0,5.16134e-06,0.999995
-chr1	9788816	.	AACAACAACAAC	AACAACAACAACAAC	.	.	END=9788827;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.938741:5,5:5-5,5-5:8,9,0,0:5,8:NULL:109.917:366.612,131.36:0.0,0.0:4.20051e-38,0.0268514,0.973202	0/0:21:0.99973:4,4:4-4,4-4:15,4,0,2:4,15:3,2:112.361:326.675,113.385:0.0,0.0:0.0,0.000101813,0.999902
-chr1	9789386	.	ATTTTATTTTATTTT	.	.	.	END=9789400;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,11,0,2:3,22:2,2:208.141:366.612,131.36:0.0,0.0:0.0,8.52529e-07,1.0	0/0:26:0.999417:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.853:326.675,113.385:0.0,0.0:0.0,0.000427715,0.999575
-chr1	9796569	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=9796608;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.955718:13,13:12-14,12-14:12,19,0,4:12,2|13,10:5,1|7,1|9,1|12,1:263.311:366.612,131.36:0.397522,0.397522:1.0,0.0,0.0	0/0:39:0.851358:20,20:19-20,19-20:17,12,0,9:19,5|20,12:8,3|10,1|12,1|14,1|16,1|17,2:268.039:326.675,113.385:0.478127,0.478127:1.68661e-13,0.148339,0.85174
-chr1	9798093	.	CCGCCCGCCCGCCCGCCCGC	.	.	.	END=9798112;RU=ccgc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999086:5,5:5-5,5-5:13,17,0,5:5,13:2,1|3,1|4,3:247.0:366.612,131.36:0.0,0.0:3.414e-42,0.000565405,0.999438	0/0:44:1.0:5,5:5-5,5-5:23,17,0,4:5,23:3,1|4,3:281.783:326.675,113.385:0.0,0.0:0.0,3.9344e-07,1.0
-chr1	9800381	.	TTTTATTTTATTTTA	.	.	.	END=9800395;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.988017:3,3:3-3,3-3:10,8,0,0:3,10:NULL:117.52:366.612,131.36:0.0,0.0:6.69032e-33,0.00776259,0.992257	0/0:28:0.999938:3,3:3-3,3-3:17,8,0,3:3,17:2,3:164.191:326.675,113.385:0.0,0.0:0.0,2.82943e-05,0.999972
-chr1	9801889	.	TTCTTTCTTTCT	.	.	.	END=9801900;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999516:3,3:3-3,3-3:15,11,0,0:3,15:NULL:163.087:366.612,131.36:0.0,0.0:6.9e-44,0.000268222,0.999735	0/0:10:0.964687:3,3:3-3,3-3:8,2,0,0:3,8:NULL:48.5915:326.675,113.385:0.0,0.0:5.61729e-24,0.0150769,0.984957
-chr1	9803579	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=9803606;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.88391:15,15:15-16,15-16:6,18,0,7:15,6:6,1|7,1|8,1|11,1|13,2|14,1:243.146:366.612,131.36:0.398507,0.398507:1.37015e-19,0.0164038,0.98363	0/1:27:0.815792:14,15:14-14,14-15:17,6,0,4:14,13|15,4:8,2|10,1|12,1:173.844:326.675,113.385:0.0,0.498798:1.52138e-19,2.32917e-05,0.999979
-chr1	9804974	.	TTGTTTGTTTGTTTGT	.	.	.	END=9804989;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999777:4,4:4-4,4-4:16,6,0,0:4,16:NULL:118.431:366.612,131.36:0.0,0.0:0.0,0.000128633,0.999872	0/0:17:0.998613:4,4:4-4,4-4:13,4,0,0:4,13:NULL:89.6982:326.675,113.385:0.0,0.0:3.39e-43,0.000790602,0.999211
-chr1	9806598	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=9806615;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.853582:6,6:6-6,6-6:6,6,0,0:6,6:NULL:77.6782:366.612,131.36:0.0,0.0:4.9514e-15,0.0782325,0.921864	0/0:17:0.994489:6,6:6-6,6-6:11,6,0,0:6,11:NULL:99.6822:326.675,113.385:0.0,0.0:1.39924e-26,0.00350447,0.996504
-chr1	9806750	.	TTGTTGTTGTTG	.	.	.	END=9806761;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999921:4,4:4-4,4-4:17,11,0,0:4,17:NULL:161.608:366.612,131.36:0.0,0.0:0.0,4.79419e-05,0.999955	0/0:24:0.996284:4,4:4-4,4-4:12,12,0,0:4,12:NULL:157.937:326.675,113.385:0.0,0.0:4.87992e-40,0.00240843,0.997601
-chr1	9806981	.	CGGGCGGGCGGGCGGG	.	.	.	END=9806996;RU=cggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.989594:4,4:3-4,3-4:10,29,0,0:4,10:NULL:297.311:366.612,131.36:0.489073,0.489073:1.19331e-31,0.00907198,0.990948	0/0:22:0.986559:4,4:4-4,4-4:10,12,0,0:4,10:NULL:147.084:326.675,113.385:0.0,0.0:1.26129e-31,0.00847134,0.991547
-chr1	9807678	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9807697;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999646:4,4:4-4,4-4:14,14,0,3:4,14:2,1|3,2:201.224:366.612,131.36:0.0,0.0:0.0,0.000195752,0.999805	0/0:27:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:132.185:326.675,113.385:0.0,0.0:0.0,2.19567e-06,1.0
-chr1	9808179	.	TGTGTGTGTGTGTGTG	.	.	.	END=9808194;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999386:8,8:8-8,8-8:16,14,0,0:8,16:NULL:200.534:366.612,131.36:0.0,0.0:1.96352e-29,0.000336866,0.999666	0/0:32:0.999918:8,8:8-8,8-8:18,9,0,4:8,18:4,1|5,2|6,1:188.85:326.675,113.385:0.0990099,0.0990099:6.67356e-33,3.72853e-05,0.999964
-chr1	9808200	.	GAGAGAGAGAGA	.	.	.	END=9808211;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999693:6,6:6-6,6-6:16,18,0,0:6,16:NULL:230.695:366.612,131.36:0.0,0.0:1.655e-42,0.00018272,0.999819	0/0:34:1.0:6,6:6-6,6-6:24,10,0,0:6,24:NULL:186.575:326.675,113.385:0.0,0.0:0.0,6.11492e-07,1.0
-chr1	9808370	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	END=9808417;RU=tcca;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998063:10,10:10-10,10-10:12,13,0,11:10,12:4,2|6,4|7,2|8,1|9,2:253.601:366.612,131.36:0.0,0.0:0.999514,0.000488608,2.76787e-32	0/0:29:0.999744:12,12:7-12,7-12:16,6,0,5:12,16:2,1|6,1|8,1|9,1|11,1:163.278:326.675,113.385:2.13292,2.13292:2.5e-44,0.000172019,0.999828
-chr1	9808990	.	GTTGGTTGGTTG	.	.	.	END=9809001;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999405:3,3:3-3,3-3:14,13,0,0:3,14:NULL:177.168:366.612,131.36:0.0,0.0:0.0,0.000397118,0.999606	0/0:33:0.999972:3,3:3-3,3-3:17,12,0,4:3,17:2,4:202.829:326.675,113.385:0.0,0.0:0.0,1.99062e-05,0.99998
-chr1	9812671	.	ATTATATTATATTATATTATATTATATTATATTATATTAT	ATTATATTATATTATATTATATTATATTATATTATATTATATTATATTAT	.	.	END=9812710;RU=attat;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.929431:10,10:10-10,10-10:7,7,0,10:10,7:2,1|3,3|5,1|6,1|8,1|9,3:170.782:366.612,131.36:0.0,0.0:0.0,0.00194016,0.998064	0/0:16:0.97688:8,8:8-10,8-10:9,3,0,3:8,9:4,1|6,1|8,1:89.9138:326.675,113.385:0.985733,0.985733:7.60617e-29,0.00642369,0.993594
-chr1	9818042	.	CTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT	.	.	END=9818065;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.998255:8,8:8-8,8-8:13,12,0,4:8,13:4,1|5,1|7,2:196.425:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/0:39:0.994984:12,12:11-12,11-12:18,14,0,6:11,2|12,16:5,2|6,1|7,1|8,1|11,1:258.777:326.675,113.385:0.19802,0.19802:1.30381e-19,0.0050082,0.995003
-chr1	9818295	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9818334;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.48605:22,22:20-23,20-23:7,18,0,10:21,2|22,5:9,1|13,1|15,1|16,1|18,1|19,3|20,2:275.557:366.612,131.36:0.839893,0.839893:1.30512e-28,0.0037958,0.996216	0/0:36:0.966917:20,20:19-20,19-20:15,8,0,12:19,3|20,12:5,3|6,1|8,2|9,2|14,3|15,1:238.437:326.675,113.385:0.311527,0.311527:1.02404e-11,0.0317838,0.968277
-chr1	9820226	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9820273;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.694588:23,23:22-23,22-23:11,19,0,13:22,4|23,7:5,1|7,1|10,1|13,4|16,1|17,1|19,2|22,2:332.197:366.612,131.36:0.398507,0.398507:0.986097,0.01393,2.23481e-06	0/0:36:0.993385:24,24:21-25,21-25:15,10,0,9:24,15:5,1|7,1|8,1|10,1|11,2|13,1|16,1|20,1:235.877:326.675,113.385:0.561483,0.561483:3.0861e-17,0.000580728,0.999423
-chr1	9821837	.	ATTTATTTATTT	.	.	.	END=9821848;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.998511:3,3:3-3,3-3:13,7,0,0:3,13:NULL:117.565:366.612,131.36:0.0,0.0:5.13e-38,0.000747728,0.999256	0/0:30:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:156.203:326.675,113.385:0.0,0.0:0.0,4.60405e-07,1.0
-chr1	9821849	.	TATGTATGTATG	.	.	.	END=9821860;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.994045:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.202:366.612,131.36:0.0,0.0:4.28964e-32,0.00311552,0.996891	0/0:30:1.0:3,3:3-3,3-3:19,8,0,3:3,19:2,3:172.917:326.675,113.385:0.0,0.0:0.0,6.31206e-06,0.999994
-chr1	9823285	.	TTCTTTCTTTCT	.	.	.	END=9823296;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.990103:3,3:3-3,3-3:10,15,0,0:3,10:NULL:173.987:366.612,131.36:0.0,0.0:4.47423e-25,0.0067479,0.99327	0/0:32:1.00001:3,3:3-3,3-3:23,6,0,3:3,23:2,3:167.214:326.675,113.385:0.0,0.0:0.0,4.1974e-07,1.0
-chr1	9824948	.	TGTCTGTCTGTC	.	.	.	END=9824959;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:0.993508:3,3:3-6,3-6:40,25,0,2:3,34|5,2|6,4:2,2:434.181:366.612,131.36:1.34522,1.34522:0.0,8.55004e-11,1.0	0/0:41:1.00001:3,3:3-3,3-3:22,16,0,3:3,22:2,3:254.318:326.675,113.385:0.0,0.0:9.1404e-41,1.24183e-06,1.0
-chr1	9824960	.	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	.	.	END=9825019;RU=tcct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:75:0.894101:18,18:17-18,17-18:6,36,0,32:18,6:3,1|4,2|5,2|6,4|7,3|8,4|9,4|10,1|11,3|12,2|13,2|14,1|15,1|16,2:590.562:366.612,131.36:0.601439,0.601439:5.7e-44,0.0205646,0.979476	0/0:50:0.886348:15,15:15-15,15-15:6,21,0,23:15,6:3,1|4,2|5,1|6,3|7,2|8,5|10,1|11,1|12,2|13,4|15,1:385.936:326.675,113.385:0.19802,0.19802:2.6076e-24,0.0454539,0.95462
-chr1	9825656	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=9825687;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.836127:18,19:18-18,18-19:16,16,0,7:17,2|18,14:5,1|6,1|10,1|12,1|16,1|17,1|19,1:286.494:366.612,131.36:0.0,0.552507:0.0,4.13143e-09,1.0	0/0:43:0.929022:16,16:14-16,14-16:14,15,0,13:15,3|16,11:6,2|7,1|8,1|9,5|12,2|13,1|14,1:311.934:326.675,113.385:0.467134,0.467134:2.76491e-11,0.0697273,0.930367
-chr1	9827879	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	END=9827922;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.997821:12,12:12-14,12-14:13,9,0,6:12,13:2,1|3,1|4,1|5,1|6,1|11,1:185.044:366.612,131.36:0.938037,0.938037:1e-45,0.000621068,0.999384	0/0:34:0.990326:11,11:10-11,10-11:10,10,0,13:11,10:3,1|4,1|5,2|6,3|7,1|8,1|9,3|10,1:226.932:326.675,113.385:0.486863,0.486863:3.51965e-21,0.00474081,0.995273
-chr1	9829194	.	CAAACAAACAAA	.	.	.	END=9829205;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.931957:3,3:3-3,3-3:8,20,0,0:3,8:NULL:215.818:366.612,131.36:0.19802,0.19802:2.28635e-26,0.0536245,0.946459	0/0:23:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:110.934:326.675,113.385:0.0,0.0:0.0,7.53979e-06,0.999994
-chr1	9830384	.	TGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGTTGT	.	.	END=9830407;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.00001:7,7:7-7,7-7:20,5,0,6:7,20:4,2|5,2|6,2:170.636:366.612,131.36:0.0,0.0:0.999994,7.56169e-06,1.09839e-35	0/0:42:1.00001:8,8:8-9,8-9:21,13,0,7:8,21:4,1|5,2|6,1|7,3:258.526:326.675,113.385:0.236383,0.236383:0.0,2.35716e-06,1.0
-chr1	9830483	.	ATTTATTTATTTATTT	.	.	.	END=9830498;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999662:4,4:4-4,4-4:15,8,0,0:4,15:NULL:129.304:366.612,131.36:0.0,0.0:0.0,0.000198231,0.999804	0/0:40:1.0:4,4:4-4,4-4:25,9,0,6:4,25:2,2|3,4:227.354:326.675,113.385:0.0,0.0:0.0,9.26518e-08,1.0
-chr1	9831159	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA	.	.	END=9831204;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.875261:18,18:17-18,17-18:10,7,0,5:17,2|18,8:5,1|7,1|8,1|11,2:153.974:366.612,131.36:0.298675,0.298675:1.0,0.0,0.0	0/0:41:0.979102:23,23:21-23,21-23:10,12,0,17:23,10:5,3|8,1|9,1|11,2|14,2|15,2|16,1|18,1|20,2|21,1|22,1:293.713:326.675,113.385:0.374933,0.374933:2.1171e-11,0.00763937,0.992378
-chr1	9837956	.	AGAAAAGAAAAGAAA	AGAAA	.	.	END=9837970;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0297231:1,1:1-2,1-2:0,8,0,0:NULL:NULL:71.9503:366.612,131.36:0.390807,0.390807:0.0782578,0.444725,0.477189	0/0:30:1.00001:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.123:326.675,113.385:0.0,0.0:0.0,3.63503e-06,1.0
-chr1	9838257	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9838310;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:3:0.0468556:33,35:33-36,33-36:0,2,0,0:NULL:NULL:19.3453:366.612,131.36:0.950392,0.950392:0.0,0.0,1.0	0/3:39:0.304945:27,50:27-28,27-50:7,15,0,16:26,2|27,5:7,2|9,1|10,1|13,1|14,1|15,1|16,1|17,1|22,3|25,1|26,1|27,1|48,1:307.266:326.675,113.385:0.242928,10.4355:5.27967e-17,3.53169e-05,0.999964
-chr1	9839831	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9839872;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:15:0.141619:27,27:23-27,23-27:2,7,0,5:27,2:5,2|7,1|8,1|21,1:113.089:366.612,131.36:0.778346,0.778346:0.0,0.0,1.0	1/0:36:0.679783:20,21:17-21,21-22:14,9,0,9:20,6|21,8:5,1|9,1|10,1|13,2|15,2|16,1|20,1:225.393:326.675,113.385:1.12139,0.433614:2.84722e-07,0.680048,0.319968
-chr1	9840939	.	GGCAGGCAGGCA	GGCAGGCAGGCAGGCAGGCAGGCA	.	.	END=9840950;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.00129243:6,6:2-26,2-26:0,5,0,0:NULL:NULL:47.1789:366.612,131.36:9.54068,9.54068:0.00160588,0.112949,0.885551	0/0:43:1.0:3,3:3-3,3-3:26,14,0,3:3,26:2,3:250.977:326.675,113.385:0.0,0.0:0.0,5.21674e-08,1.0
-chr1	9841455	.	ATTTATTTATTT	.	.	.	END=9841466;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.745145:3,3:3-3,3-3:5,9,0,0:3,5:NULL:102.013:366.612,131.36:0.19802,0.19802:3.2461e-17,0.128006,0.872092	0/0:34:1.0:3,3:3-3,3-3:18,13,0,3:3,18:2,3:211.788:326.675,113.385:0.0,0.0:0.0,7.91138e-06,0.999994
-chr1	9844142	.	TTTGTTTTGTTTTGT	.	.	.	END=9844156;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:214.616:366.612,131.36:0.0,0.0:0.0,3.18974e-06,1.0	0/0:31:0.999995:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.375:326.675,113.385:0.0,0.0:0.0,1.24004e-05,0.999987
-chr1	9845384	.	TTTGTTTGTTTGTTTG	.	.	.	END=9845399;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.998791:4,4:4-4,4-4:13,17,0,4:4,13:2,1|3,3:239.939:366.612,131.36:0.0,0.0:1.195e-42,0.000582992,0.999422	0/0:39:1.00001:4,4:4-4,4-4:22,13,0,4:4,22:3,4:234.074:326.675,113.385:0.0,0.0:0.0,8.18899e-07,1.0
-chr1	9849556	.	ATAAATAAATAA	.	.	.	END=9849567;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999492:3,3:3-3,3-3:14,6,0,3:3,14:2,3:130.899:366.612,131.36:0.0,0.0:0.0,0.000200496,0.999803	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.533:326.675,113.385:0.0,0.0:0.0,2.51299e-06,1.0
-chr1	9852948	.	GTGTGTGTGTGT	.	.	.	END=9852959;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:6,6:6-6,6-6:25,20,0,4:6,25:4,1|5,3:310.852:366.612,131.36:0.139319,0.139319:0.0,1.32196e-07,1.0	0/0:80:1.0:6,6:6-6,6-6:52,20,0,7:6,52:4,1|5,5|6,1:443.199:326.675,113.385:0.0,0.0:0.0,6.31683e-16,1.0
-chr1	9853686	.	TGGGGGTGGGGGTGGGGG	.	.	.	END=9853703;RU=tggggg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.997794:3,3:3-3,3-3:12,4,0,0:3,12:NULL:85.2044:366.612,131.36:0.0,0.0:3.32937e-37,0.0011244,0.998877	0/0:24:0.999793:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.883:326.675,113.385:0.0,0.0:0.0,0.000124373,0.999879
-chr1	9854454	.	GGTGTGGGTGTGGGTGTG	.	.	.	END=9854471;RU=ggtgtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999504:3,3:3-3,3-3:15,24,0,0:3,15:NULL:283.829:366.612,131.36:0.0,0.0:0.0,0.000434667,0.999568	0/0:46:1.0:3,3:3-3,3-3:28,16,0,2:3,28:2,2:277.364:326.675,113.385:0.0,0.0:0.0,2.70576e-08,1.0
-chr1	9855719	.	AAAACAAAACAAAAC	.	.	.	END=9855733;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:20,24,0,3:3,20:2,3:313.064:366.612,131.36:0.0,0.0:0.0,9.3561e-06,0.999993	0/0:42:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:254.18:326.675,113.385:0.0,0.0:0.0,3.36552e-07,1.0
-chr1	9856153	.	TCTCTGTCTCTGTCTCTGTCTCTG	.	.	.	END=9856176;RU=tctctg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999708:4,4:4-4,4-4:15,16,0,2:4,15:3,2:226.754:366.612,131.36:0.0,0.0:0.0,0.000228585,0.999773	0/0:35:1.00001:4,4:4-4,4-4:22,11,0,2:4,22:2,1|3,1:200.712:326.675,113.385:0.0,0.0:0.0,1.50182e-06,1.0
-chr1	9856692	.	TTGGTTGGTTGG	.	.	.	END=9856703;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.147:366.612,131.36:0.0,0.0:0.0,6.00121e-06,0.999995	0/0:38:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:242.701:326.675,113.385:0.0,0.0:0.0,3.8504e-06,1.0
-chr1	9861552	.	CACACACACACA	.	.	.	END=9861563;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996689:6,6:6-6,6-6:12,17,0,0:6,12:NULL:199.806:366.612,131.36:0.0,0.0:1.73761e-30,0.00195815,0.998049	0/0:28:0.999915:6,6:6-6,6-6:17,11,0,0:6,17:NULL:168.335:326.675,113.385:0.0,0.0:5.68e-43,5.40906e-05,0.999948
-chr1	9862138	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9862197;RU=tc;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.283346:28,34:28-34,28-35:2,12,0,6:28,2:11,1|20,1|27,2|32,2:173.596:366.612,131.36:1.98781,2.06212:1.3212e-14,0.996905,0.00310473	0/3:23:0.243131:30,37:30-37,30-39:2,8,0,12:30,2:5,2|8,2|15,1|21,1|23,1|24,1|26,1|27,1|31,1|36,1:182.082:326.675,113.385:1.48138,3.03113:6.09945e-17,0.00714323,0.992873
-chr1	9863057	.	GTTGTTGTTGTT	.	.	.	END=9863068;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:222.293:366.612,131.36:0.0,0.0:0.0,3.25984e-07,1.0	0/0:44:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:248.583:326.675,113.385:0.0,0.0:0.0,1.11874e-08,1.0
-chr1	9864594	.	CACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACA	.	.	END=9864631;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.999921:14,14:14-14,14-14:22,14,0,9:13,2|14,20:6,2|9,2|11,2|12,1|13,2:289.763:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:37:0.675596:19,19:18-19,18-19:14,11,0,12:18,4|19,10:7,3|8,1|11,1|12,2|13,1|15,1|18,2|19,1:265.578:326.675,113.385:0.484441,0.484441:1.43435e-18,0.32366,0.676349
-chr1	9867773	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9867818;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.611123:24,25:23-24,23-25:9,6,0,0:23,3|24,4|25,2:NULL:108.064:366.612,131.36:0.509492,0.987918:2.54692e-12,0.0019901,0.998018	0/3:58:0.323888:23,30:22-23,22-31:17,13,0,26:22,7|23,10:5,1|7,3|9,2|10,1|11,1|12,1|13,1|15,1|17,4|18,3|19,1|20,1|21,4|26,1|30,1:432.974:326.675,113.385:0.236383,3.65447:3.68409e-18,4.2178e-08,1.0
-chr1	9869113	.	AAACAAACAAAC	.	.	.	END=9869124;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:190.381:366.612,131.36:0.0,0.0:0.0,4.82552e-06,0.999995	0/0:48:1.0:3,3:3-3,3-3:29,16,0,3:3,29:2,3:287.382:326.675,113.385:0.0,0.0:0.0,5.28486e-09,1.0
-chr1	9869920	.	TTATTTATTTAT	TTATTTAT	.	.	END=9869931;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:1.0:2,2:2-2,2-2:19,19,0,0:2,19:NULL:248.076:366.612,131.36:0.0,0.0:0.999994,7.2952e-06,0.0	0/0:48:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:295.033:326.675,113.385:0.0,0.0:0.0,3.15431e-08,1.0
-chr1	9870260	.	AAAACAAAACAAAAC	.	.	.	END=9870274;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999959:3,3:3-3,3-3:17,10,0,2:3,17:2,2:178.341:366.612,131.36:0.0,0.0:0.0,2.2708e-05,0.999979	0/0:47:1.0:3,3:3-3,3-3:26,19,0,2:3,26:2,2:291.141:326.675,113.385:0.0,0.0:0.0,3.40741e-08,1.0
-chr1	9871386	.	AAACAAACAAAC	.	.	.	END=9871397;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999952:3,3:3-3,3-3:17,5,0,2:3,17:2,2:125.436:366.612,131.36:0.0,0.0:0.0,1.64594e-05,0.999986	0/0:31:0.999928:3,3:3-3,3-3:17,14,0,0:3,17:NULL:191.988:326.675,113.385:0.0,0.0:0.0,5.03227e-05,0.999949
-chr1	9879082	.	TTAATTAATTAATTAA	.	.	.	END=9879097;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:20,9,0,0:4,20:NULL:159.068:366.612,131.36:0.0,0.0:0.0,6.97538e-06,0.999994	0/0:28:0.999416:4,4:2-4,2-4:14,11,0,2:4,14:2,2:168.38:326.675,113.385:0.838725,0.838725:0.0,0.000365613,0.999636
-chr1	9879249	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9879284;RU=ct;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.992848:15,15:14-16,14-16:16,17,0,8:14,2|15,14:5,1|9,1|10,2|13,1|14,3:289.126:366.612,131.36:0.243733,0.243733:0.99997,3.39202e-05,1.05713e-27	2/0:18:0.767584:17,18:16-18,16-18:5,8,0,4:17,2|18,3:5,1|12,1|13,1|18,1:129.478:326.675,113.385:0.680364,0.40047:3.97845e-11,0.813711,0.186351
-chr1	9879878	.	AAATAAATAAAT	.	.	.	END=9879889;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999975:3,3:3-3,3-3:18,23,0,0:3,18:NULL:275.822:366.612,131.36:0.0,0.0:0.0,2.97102e-05,0.999971	0/0:18:0.999676:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.7982:326.675,113.385:0.0,0.0:0.0,0.000170969,0.999833
-chr1	9881346	.	AAACAAACAAAC	.	.	.	END=9881357;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99988:3,3:3-3,3-3:16,13,0,2:3,16:2,2:195.991:366.612,131.36:0.0,0.0:0.0,7.08186e-05,0.999933	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:169.089:326.675,113.385:0.0,0.0:0.0,5.3849e-06,0.999995
-chr1	9882998	.	AGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAG	.	.	END=9883013;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.899765:11,11:10-11,10-11:20,15,0,0:10,4|11,16:NULL:232.783:366.612,131.36:0.496236,0.496236:0.0,5.84748e-06,0.999995	0/0:46:0.999933:8,8:7-8,7-8:27,19,0,0:7,3|8,24:NULL:287.503:326.675,113.385:0.195027,0.195027:1.96e-43,6.88518e-05,0.999933
-chr1	9885007	.	AAATAAATAAAT	.	.	.	END=9885018;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999448:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.404:366.612,131.36:0.0,0.0:0.0,0.000289629,0.999712	0/0:43:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:265.343:326.675,113.385:0.0,0.0:0.0,6.64981e-07,1.0
-chr1	9885057	.	AAGCAAGCAAGCAAGC	.	.	.	END=9885072;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999615:4,4:4-4,4-4:14,13,0,2:4,14:3,2:183.777:366.612,131.36:0.0,0.0:0.0,0.000180652,0.99982	0/0:49:1.0:4,4:4-4,4-4:22,22,0,5:4,22:2,1|3,4:322.98:326.675,113.385:0.0,0.0:0.0,9.46111e-07,1.0
-chr1	9885469	.	AAACAAACAAACAAACAAAC	.	.	.	END=9885488;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999674:5,5:5-5,5-5:15,23,0,2:5,15:3,1|4,1:286.081:366.612,131.36:0.0,0.0:0.0,0.000260613,0.999742	0/0:32:0.999898:5,5:5-5,5-5:16,12,0,4:5,16:2,1|4,3:208.683:326.675,113.385:0.0,0.0:0.0,5.205e-05,0.999949
-chr1	9887284	.	GTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9887299;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:0.209314:14,14:8-14,8-14:2,44,0,4:14,2:4,1|7,1|12,2:449.64:366.612,131.36:1.88218,1.88218:0.0,0.0,1.0	0/0:48:1.00001:8,8:8-8,8-8:22,23,0,2:8,22:6,2:333.026:326.675,113.385:0.0,0.0:2.00117e-39,1.37359e-06,1.0
-chr1	9887485	.	AACAACAACAAC	AAC,AACAACAAC	.	.	END=9887496;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:12:0.0586291:1,3:3-6,3-6:0,10,0,0:NULL:NULL:97.0339:366.612,131.36:1.11394,1.06646:0.245824,0.507488,0.246708	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:224.506:326.675,113.385:0.0,0.0:0.0,2.42337e-07,1.0
-chr1	9890042	.	TTACTTACTTAC	.	.	.	END=9890053;RU=ttac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:29,22,0,0:3,29:NULL:313.361:366.612,131.36:0.0,0.0:0.0,3.53268e-08,1.0	0/0:45:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:258.912:326.675,113.385:0.0,0.0:0.0,1.2277e-08,1.0
-chr1	9892145	.	TGCTTGCTTGCT	.	.	.	END=9892156;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999911:3,3:3-3,3-3:17,6,0,0:3,17:NULL:119.963:366.612,131.36:0.0,0.0:0.0,5.25139e-05,0.999948	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:222.228:326.675,113.385:0.0,0.0:0.0,1.95093e-08,1.0
-chr1	9893504	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9893541;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0238588:1,1:1-7,1-7:0,28,0,0:NULL:NULL:259.638:366.612,131.36:1.75429,1.75429:0.97156,0.0284034,8.91644e-05	0/2:52:0.297224:19,24:19-19,19-25:17,15,0,18:18,2|19,15:5,1|6,1|7,3|8,2|9,1|10,1|12,1|13,3|15,1|16,2|18,1|24,1:372.061:326.675,113.385:0.0,2.45313:2.49488e-16,1.29365e-05,0.999987
-chr1	9893935	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC,TCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9893984;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:8:0.00457127:1,2:1-7,1-7:0,8,0,0:NULL:NULL:67.714:366.612,131.36:2.33974,2.32123:0.544137,0.406993,0.0490268	0/3:38:0.376588:25,27:22-25,22-28:4,22,0,12:25,4:11,2|12,1|14,2|15,1|17,2|18,1|21,1|22,1|27,1:312.196:326.675,113.385:0.5093,1.40594:2.97015e-12,0.000131841,0.999872
-chr1	9898438	.	GTATGTATGTAT	.	.	.	END=9898449;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.978492:3,3:3-3,3-3:9,14,0,0:3,9:NULL:166.738:366.612,131.36:0.0,0.0:1.9341e-33,0.0150783,0.984951	0/0:42:1.0:3,3:3-3,3-3:25,15,0,2:3,25:2,2:259.815:326.675,113.385:0.0,0.0:0.0,1.99488e-07,1.0
-chr1	9901685	.	TTTGTTTGTTTG	.	.	.	END=9901696;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.956383:3,3:3-3,3-3:8,19,0,0:3,8:NULL:204.764:366.612,131.36:0.0,0.0:4.14176e-25,0.0298128,0.970245	0/0:37:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:227.902:326.675,113.385:0.0,0.0:0.0,1.54881e-06,1.0
-chr1	9902992	.	CAGCCAGCCAGC	.	.	.	END=9903003;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.493114:3,3:1-3,1-3:4,13,0,0:3,4:NULL:138.826:366.612,131.36:0.464609,0.464609:6.93932e-13,0.263274,0.736731	0/0:18:0.891041:3,3:3-3,3-3:7,11,0,0:3,7:NULL:128.4:326.675,113.385:0.0,0.0:4.43637e-22,0.0645661,0.935524
-chr1	9903318	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9903365;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.411727:25,28:25-25,25-28:7,24,0,13:25,7:7,1|8,1|10,1|11,2|14,1|15,1|19,1|21,1|22,1|24,1|25,1|28,1:363.359:366.612,131.36:0.0,1.47853:1.40748e-31,1.59087e-07,1.0	0/1:50:0.996071:24,25:24-25,24-25:16,16,0,18:23,2|24,9|25,5:5,2|6,1|7,1|8,1|9,4|11,1|13,1|14,2|16,1|19,1|20,1|21,1|22,1:377.873:326.675,113.385:0.195027,0.345543:1.73537e-16,5.01236e-05,0.999949
-chr1	9905688	.	TAAATAAATAAA	.	.	.	END=9905699;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:245.165:366.612,131.36:0.0,0.0:0.0,6.23891e-06,0.999995	0/0:26:0.999304:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.728:326.675,113.385:0.0,0.0:0.0,0.000467848,0.999537
-chr1	9908942	.	CTGTCTGTCTGT	.	.	.	END=9908953;RU=ctgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999835:3,3:3-3,3-3:16,19,0,0:3,16:NULL:238.973:366.612,131.36:0.0,0.0:0.0,9.62251e-05,0.999904	0/0:38:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:254.86:326.675,113.385:0.0,0.0:0.0,9.79986e-06,0.999993
-chr1	9909330	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=9909349;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999896:4,4:4-4,4-4:17,21,0,0:4,17:NULL:262.052:366.612,131.36:0.0,0.0:0.0,9.88637e-05,0.999903	0/0:23:0.999776:4,4:4-4,4-4:15,4,0,4:4,15:2,2|3,2:126.019:326.675,113.385:0.0,0.0:2e-44,8.28355e-05,0.999918
-chr1	9909905	.	TGGTGGTGGTGGTGG	.	.	.	END=9909919;RU=tgg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999914:5,5:5-5,5-5:16,15,0,2:5,16:4,2:213.466:366.612,131.36:0.0,0.0:0.0,4.13652e-05,0.999962	0/0:37:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:4,2:225.98:326.675,113.385:0.0,0.0:0.0,1.89249e-06,1.0
-chr1	9910263	.	ATGTATGTATGTATGTATGTATGTATGTATGT	ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT,ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	END=9910294;RU=atgt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:1.0:11,12:11-11,12-12:13,18,0,5:11,7|12,6:4,1|9,1|10,1|11,2:268.62:366.612,131.36:0.0990099,0.0:0.0,0.0,1.0	0/0:57:1.0:8,8:8-9,8-9:22,22,0,11:8,22:2,1|3,1|4,4|5,1|7,4:372.409:326.675,113.385:0.169767,0.169767:0.0,1.6759e-06,1.0
-chr1	9911074	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9911103;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.940177:21,21:20-21,20-21:11,12,0,16:20,2|21,9:5,1|7,2|11,1|12,1|13,2|14,3|15,1|18,1|19,1|20,3:293.216:366.612,131.36:0.422623,0.422623:0.0,0.0,1.0	0/0:50:0.995963:15,15:14-16,14-16:23,16,0,9:13,2|14,3|15,18:6,1|9,2|11,2|12,1|13,1|14,2:331.675:326.675,113.385:0.430892,0.430892:3.29582e-21,0.00404109,0.995968
-chr1	9911501	.	TTGTTGTTGTTG	TTG	.	.	END=9911512;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.0667818:1,1:1-3,1-3:0,17,0,0:NULL:NULL:153.882:366.612,131.36:0.461008,0.461008:0.326566,0.517452,0.156012	0/0:25:0.999989:4,4:4-4,4-4:18,5,0,2:4,18:3,2:133.462:326.675,113.385:0.0,0.0:0.0,1.61308e-05,0.999986
-chr1	9913930	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=9913979;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.600148:19,19:18-19,18-19:5,14,0,6:19,5:6,1|8,1|11,1|12,1|13,2:197.352:366.612,131.36:0.352842,0.352842:1.0,0.0,0.0	0/0:39:0.284415:25,25:12-25,12-25:6,20,0,11:24,2|25,4:5,1|9,2|11,3|12,1|13,1|16,2|21,1:300.186:326.675,113.385:5.37526,5.37526:0.00137437,0.683164,0.31548
-chr1	9914697	.	TTATTTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTATTTATTTATTTAT	.	.	END=9914724;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.936097:9,9:9-9,9-9:7,13,0,3:9,7:4,1|7,1|8,1:170.463:366.612,131.36:0.0,0.0:1.69215e-38,0.00880929,0.99121	0/0:20:0.999825:7,7:7-7,7-7:16,4,0,0:7,16:NULL:106.409:326.675,113.385:0.0,0.0:1.23276e-40,0.000110242,0.999894
-chr1	9914909	.	TATTTATTTATT	.	.	.	END=9914920;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999952:3,3:3-3,3-3:17,9,0,0:3,17:NULL:149.228:366.612,131.36:0.0,0.0:0.0,3.09509e-05,0.999971	0/0:38:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:237.639:326.675,113.385:0.0,0.0:0.0,2.51367e-06,1.0
-chr1	9916204	.	ACAAACAAACAAACAAACAAACAA	.	.	.	END=9916227;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999805:6,6:6-6,6-6:15,17,0,5:6,15:3,1|4,1|5,3:258.758:366.612,131.36:0.0,0.0:1.112e-41,0.000114363,0.999887	0/0:42:1.0:6,6:6-6,6-6:22,14,0,6:6,22:3,1|4,1|5,4:270.528:326.675,113.385:0.0,0.0:0.0,5.54593e-07,1.0
-chr1	9916809	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9916844;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:43:0.354926:21,22:21-23,22-23:8,24,0,11:21,3|22,3|23,2:5,2|9,3|11,1|12,1|14,1|15,1|16,1|21,1:359.386:366.612,131.36:0.969893,0.494455:0.0,0.0,1.0	0/0:27:0.987027:18,18:17-19,17-19:14,9,0,3:17,2|18,12:7,1|9,1|15,1:173.626:326.675,113.385:0.329868,0.329868:9.77748e-14,0.0120442,0.987981
-chr1	9918705	.	ATTTATTTATTT	.	.	.	END=9918716;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999363:3,3:3-3,3-3:14,20,0,2:3,14:2,2:254.897:366.612,131.36:0.0,0.0:0.0,0.00037565,0.999628	0/0:39:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:223.823:326.675,113.385:0.0,0.0:0.0,2.44769e-07,1.0
-chr1	9920939	.	CACCACCACCAC	.	.	.	END=9920950;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997915:4,4:4-4,4-4:12,13,0,3:4,12:3,3:186.52:366.612,131.36:0.0,0.0:9.20825e-40,0.000727877,0.999278	0/0:25:0.999758:4,4:4-4,4-4:15,8,0,2:4,15:3,2:148.712:326.675,113.385:0.0,0.0:0.0,0.000113113,0.999888
-chr1	9922186	.	GTTTGTTTGTTTGTTT	.	.	.	END=9922201;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:4,4:4-4,4-4:23,14,0,4:4,23:2,3|3,1:250.895:366.612,131.36:0.0,0.0:0.0,6.67579e-07,1.0	0/0:42:1.00001:4,4:4-4,4-4:22,15,0,5:4,22:2,2|3,3:261.244:326.675,113.385:0.0,0.0:0.0,9.56311e-07,1.0
-chr1	9923740	.	AAACAAACAAAC	.	.	.	END=9923751;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:221.137:366.612,131.36:0.0,0.0:0.0,7.15839e-08,1.0	0/0:32:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:173.336:326.675,113.385:0.0,0.0:0.0,9.15984e-07,1.0
-chr1	9926111	.	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC	.	.	.	END=9926146;RU=tgcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:9,9:9-9,9-9:26,27,0,3:9,26:5,1|6,2:385.972:366.612,131.36:0.0,0.0:0.0,3.23186e-07,1.0	0/0:60:1.0:9,9:9-9,9-9:30,16,0,14:9,30:2,1|3,4|4,2|5,2|6,2|7,1|8,2:372.654:326.675,113.385:0.0,0.0:0.0,2.1782e-09,1.0
-chr1	9927265	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACAC,ACACACACACACACACACACACACACACACAC	.	.	END=9927298;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.999983:8,8:8-8,8-8:20,23,0,3:8,20:5,2|7,1:316.603:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/0:46:0.938:16,17:16-18,17-17:23,16,0,6:16,7|17,14|18,2:6,1|10,1|11,1|14,2|15,1:321.003:326.675,113.385:0.589421,0.0:5.79561e-16,0.937993,0.0620969
-chr1	9928606	.	CAAACAAACAAACAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAA,CAAACAAACAAACAAACAAACAAACAAA	.	.	END=9928637;RU=caaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.999999:6,7:6-6,6-7:27,8,0,2:6,20|7,7:5,1|6,1:217.641:366.612,131.36:0.0,0.298675:1.0,1.35717e-12,0.0	0/0:47:1.0:8,8:8-8,8-8:19,16,0,12:8,19:2,1|3,2|5,4|6,1|7,4:310.491:326.675,113.385:0.0,0.0:7.54194e-38,6.13532e-06,0.999994
-chr1	9929327	.	ATTTATTTATTT	.	.	.	END=9929338;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999178:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.782:366.612,131.36:0.0,0.0:5.32e-43,0.000467032,0.999537	0/0:37:1.0:3,3:3-3,3-3:19,16,0,2:3,19:2,2:226.484:326.675,113.385:0.0,0.0:0.0,6.84549e-06,0.999994
-chr1	9931528	.	GTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9931551;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.300779:25,27:24-25,24-27:3,10,0,14:25,3:6,1|7,1|8,2|11,1|12,2|14,2|22,2|23,1|24,1|27,1:213.196:366.612,131.36:0.414188,1.25785:0.0,0.0,1.0	0/0:54:0.999892:12,12:12-12,12-12:25,20,0,8:11,3|12,22:6,3|8,2|9,1|10,2:355.594:326.675,113.385:0.0990099,0.0990099:4.0669e-29,0.000110906,0.999889
-chr1	9932293	.	CATGCATGCATG	.	.	.	END=9932304;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999915:3,3:3-3,3-3:17,10,0,0:3,17:NULL:159.901:366.612,131.36:0.0,0.0:0.0,4.9656e-05,0.999949	0/0:27:1.0:3,3:3-3,3-3:24,3,0,0:3,24:NULL:123.691:326.675,113.385:0.0,0.0:0.0,3.65319e-07,1.0
-chr1	9932642	.	TTGTTGTTGTTG	.	.	.	END=9932653;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998884:4,4:4-4,4-4:14,26,0,0:4,14:NULL:306.3:366.612,131.36:0.0,0.0:0.0,0.000958701,0.999044	0/0:51:1.0:4,4:4-4,4-4:36,13,0,2:4,36:3,2:276.95:326.675,113.385:0.0,0.0:0.0,6.98338e-11,1.0
-chr1	9932828	.	ATTTATTTATTT	.	.	.	END=9932839;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:22,32,0,0:3,22:NULL:379.475:366.612,131.36:0.0,0.0:0.0,1.63408e-06,1.0	0/0:57:1.0:3,3:3-3,3-3:30,23,0,4:3,30:2,4:361.396:326.675,113.385:0.0,0.0:0.0,6.78511e-09,1.0
-chr1	9934352	.	AATAAATAAATA	AATA	.	.	END=9934363;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.12816:1,1:1-2,1-2:0,18,0,0:NULL:NULL:181.554:366.612,131.36:0.48807,0.48807:0.324607,0.534066,0.141371	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:234.426:326.675,113.385:0.0,0.0:0.0,2.12861e-07,1.0
-chr1	9935825	.	AATAAATAAATA	.	.	.	END=9935836;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999946:3,3:3-3,3-3:17,9,0,3:3,17:2,3:174.81:366.612,131.36:0.0,0.0:0.0,2.60871e-05,0.999978	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:168.481:326.675,113.385:0.0,0.0:0.0,6.61641e-06,0.999994
-chr1	9936450	.	CACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9936469;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.754773:29,29:14-30,14-30:5,26,0,21:29,5:6,1|9,2|11,2|13,1|15,1|16,1|17,3|19,1|21,1|22,1|24,3|25,1|26,1|27,2:431.551:366.612,131.36:7.38805,7.38805:0.0,0.0,1.0	0/0:46:0.999835:10,10:10-10,10-10:25,10,0,10:9,2|10,23:5,1|7,3|8,1|9,5:282.769:326.675,113.385:0.0,0.0:2.73707e-27,0.000164869,0.999835
-chr1	9937602	.	AGACAGACAGAC	.	.	.	END=9937613;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:251.557:366.612,131.36:0.0,0.0:0.0,5.17987e-08,1.0	0/0:55:1.0:3,3:3-3,3-3:38,17,0,0:3,38:NULL:306.04:326.675,113.385:0.0,0.0:0.0,3.47401e-11,1.0
-chr1	9938474	.	ATTTATTTATTT	.	.	.	END=9938485;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.998051:3,3:3-3,3-3:12,20,0,0:3,12:NULL:227.664:366.612,131.36:0.0,0.0:2.00917e-35,0.00146511,0.998541	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:201.908:326.675,113.385:0.0,0.0:0.0,3.09853e-06,1.0
-chr1	9944919	.	AAAGAAAGAAAGAAAG	.	.	.	END=9944934;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.291195:4,4:1-4,1-4:4,21,0,0:4,4:NULL:210.783:366.612,131.36:1.42918,1.42918:4.83796e-12,0.605732,0.394331	0/0:22:0.998394:4,4:4-4,4-4:13,9,0,0:4,13:NULL:133.016:326.675,113.385:0.0,0.0:1.19106e-38,0.00113158,0.998875
-chr1	9945172	.	AAATAAATAAAT	AAATAAATAAATAAAT	.	.	END=9945183;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.94616:3,4:3-3,3-4:14,9,0,2:3,12|4,2:2,2:162.388:366.612,131.36:0.0,0.499779:4.32895e-35,1.41116e-05,0.999987	0/0:23:0.999466:3,3:3-3,3-3:14,9,0,0:3,14:NULL:135.122:326.675,113.385:0.0,0.0:1.65127e-37,0.000301198,0.999704
-chr1	9946807	.	ATTTATTTATTTATTT	.	.	.	END=9946822;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,18,0,0:4,23:NULL:256.771:366.612,131.36:0.0,0.0:0.0,1.9099e-06,1.0	0/0:24:0.997971:4,4:4-4,4-4:12,9,0,3:4,12:3,3:150.242:326.675,113.385:0.0,0.0:4.41124e-35,0.000867772,0.999135
-chr1	9947166	.	TCTCTCTCTCTC	.	.	.	END=9947177;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.996535:6,6:6-6,6-6:12,12,0,0:6,12:NULL:156.996:366.612,131.36:0.0,0.0:1.88734e-26,0.0018215,0.998185	0/0:24:0.999224:6,6:6-6,6-6:14,10,0,0:6,14:NULL:147.189:326.675,113.385:0.0,0.0:9.76726e-31,0.000426219,0.999576
-chr1	9948124	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9948161;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:67:0.9884:20,20:19-20,19-20:25,25,0,15:19,6|20,19:5,2|8,2|10,1|13,2|14,2|15,1|16,2|19,2|20,1:474.865:366.612,131.36:0.407748,0.407748:0.0,3.44628e-07,1.0	0/0:46:0.71969:19,19:14-21,14-21:22,12,0,10:17,2|18,5|19,15:4,1|6,4|9,1|10,1|13,1|18,2:308.056:326.675,113.385:1.22324,1.22324:1.63252e-15,0.280307,0.719693
-chr1	9948680	.	GCTAGCTAGCTA	.	.	.	END=9948691;RU=gcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:215.978:366.612,131.36:0.0,0.0:0.0,1.10919e-06,1.0	0/0:27:0.999737:3,3:3-3,3-3:15,10,0,2:3,15:2,2:164.22:326.675,113.385:0.0,0.0:0.0,0.000118598,0.999881
-chr1	9949344	.	GGAGGGAGGGAG	.	.	.	END=9949355;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:23,19,0,0:3,23:NULL:267.64:366.612,131.36:0.0,0.0:0.0,1.65122e-06,1.0	0/0:24:0.99956:3,3:3-3,3-3:14,10,0,0:3,14:NULL:148.374:326.675,113.385:0.0,0.0:0.0,0.000285647,0.999719
-chr1	9949792	.	CACACACACACA	CACACACACACACA	.	.	END=9949803;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.828594:7,7:6-8,6-8:7,22,0,0:7,7:NULL:230.641:366.612,131.36:0.806551,0.806551:3.48337e-18,0.105813,0.894289	0/0:32:0.75241:6,6:6-7,6-7:16,16,0,0:6,14|7,2:NULL:225.665:326.675,113.385:0.472558,0.472558:5.09718e-31,0.000158717,0.999842
-chr1	9952017	.	AATTAATTAATTAATT	.	.	.	END=9952032;RU=aatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999444:4,4:4-4,4-4:14,26,0,0:4,14:NULL:294.719:366.612,131.36:0.0,0.0:1.99e-43,0.000478412,0.999523	0/0:24:0.998082:4,4:4-4,4-4:13,11,0,0:4,13:NULL:147.239:326.675,113.385:0.0,0.0:8.69591e-40,0.00148927,0.998518
-chr1	9954129	.	AAATAAATAAATAAAT	.	.	.	END=9954144;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999395:4,4:4-4,4-4:14,19,0,0:4,14:NULL:228.251:366.612,131.36:0.0,0.0:0.0,0.000436763,0.999567	0/0:30:0.999958:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:176.546:326.675,113.385:0.0,0.0:0.0,2.22757e-05,0.999979
-chr1	9955647	.	AAAACAAAACAAAAC	.	.	.	END=9955661;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999977:3,3:3-3,3-3:18,20,0,0:3,18:NULL:256.039:366.612,131.36:0.0,0.0:0.0,3.37449e-05,0.99997	0/0:44:1.0:3,3:3-3,3-3:23,21,0,0:3,23:NULL:298.006:326.675,113.385:0.0,0.0:0.0,2.53549e-06,1.0
-chr1	9956363	.	TGTGTGTGTGTG	.	.	.	END=9956374;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:0.599682:6,6:6-10,6-10:27,17,0,3:6,27:5,2|7,1:299.204:366.612,131.36:1.03739,1.03739:0.0,1.96076e-08,1.0	0/0:35:1.0:6,6:5-6,5-6:24,8,0,2:6,24:5,2:186.469:326.675,113.385:0.169767,0.169767:0.0,2.89937e-07,1.0
-chr1	9956833	.	TTTCTTTCTTTC	.	.	.	END=9956844;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:2-3,2-3:22,17,0,0:3,22:NULL:240.663:366.612,131.36:0.270063,0.270063:0.0,1.76112e-06,1.0	0/0:34:1.00001:3,3:3-3,3-3:23,11,0,0:3,23:NULL:194.583:326.675,113.385:0.0,0.0:0.0,8.88355e-07,1.0
-chr1	9958725	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=9958749;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999999:5,5:5-5,5-5:18,16,0,7:5,18:2,1|3,1|4,5:263.611:366.612,131.36:0.0,0.0:0.0,1.04761e-05,0.999993	0/0:41:1.0:5,5:5-5,5-5:24,14,0,3:5,24:3,1|4,2:243.839:326.675,113.385:0.0,0.0:0.0,2.1328e-07,1.0
-chr1	9964154	.	CACACACACACA	CACACACACA	.	.	END=9964165;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:44:0.973327:5,6:5-6,6-6:23,16,0,4:5,4|6,19:4,1|5,3:292.296:366.612,131.36:0.498011,0.0:1.09539e-28,0.973325,0.0267257	0/0:40:1.0:6,6:6-6,6-6:23,17,0,0:6,23:NULL:241.746:326.675,113.385:0.0,0.0:1.526e-42,1.09676e-06,1.0
-chr1	9966035	.	TATTATTATTAT	.	.	.	END=9966046;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:20,17,0,0:4,20:NULL:235.128:366.612,131.36:0.0,0.0:0.0,1.06038e-05,0.999993	0/0:28:0.999974:4,4:4-4,4-4:18,10,0,0:4,18:NULL:156.766:326.675,113.385:0.0,0.0:0.0,3.35008e-05,0.99997
-chr1	9967640	.	CCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCG	CCCGCCCGCCCGCCCGCCCG	.	.	END=9967671;RU=cccg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999921:5,5:5-5,5-5:17,26,0,6:5,17:4,6:355.515:366.612,131.36:0.0,0.0:0.999993,9.34284e-06,0.0	0/0:69:1.0:8,8:8-8,8-8:27,33,0,9:8,27:4,2|5,4|6,1|7,2:505.436:326.675,113.385:0.0,0.0:0.0,1.28947e-07,1.0
-chr1	9969740	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=9969757;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.0:7,7:7-7,7-7:20,11,0,2:7,20:5,2:199.72:366.612,131.36:0.0,0.0:0.0,3.86837e-06,1.0	0/0:34:1.0:6,6:6-6,6-6:19,10,0,4:6,19:5,4:198.517:326.675,113.385:0.0990099,0.0990099:0.0,6.04175e-06,0.999994
-chr1	9970610	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9970627;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:32:0.279716:18,27:18-18,16-27:10,11,0,9:16,2|18,8:7,1|9,1|10,1|12,1|13,1|16,1|17,2|24,1:233.594:366.612,131.36:0.0,4.23348:0.0,0.0,1.0	0/1:30:0.362935:9,11:9-9,9-11:15,10,0,5:9,15:5,1|6,1|8,2|11,1:205.017:326.675,113.385:0.0,0.885129:1.01799e-27,4.71352e-08,1.0
-chr1	9971832	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=9971863;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.992697:6,6:6-6,6-6:10,15,0,2:6,10:4,1|5,1:203.936:366.612,131.36:0.0990099,0.0990099:0.998944,0.0010614,4.04235e-28	0/0:32:0.995512:8,8:8-8,8-8:11,11,0,10:8,11:3,1|4,3|5,1|6,3|7,2:221.554:326.675,113.385:0.0,0.0:1.77565e-31,0.00219471,0.997813
-chr1	9973536	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9973555;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:59:0.902665:12,12:8-22,8-22:27,26,0,4:11,6|12,21:6,1|7,2|19,1:424.73:366.612,131.36:4.08502,4.08502:0.0,1.04962e-07,1.0	0/0:53:0.999501:10,10:10-11,10-11:29,14,0,8:10,26|11,3:4,2|5,1|6,1|7,2|8,1|9,1:318.327:326.675,113.385:0.236383,0.236383:1.51294e-36,3.1442e-08,1.0
-chr1	9974995	.	CCTCCCTCCCTCCCTCCCTCCCTCCCTC	CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC,CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC	.	.	END=9975022;RU=cctc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.138925:9,12:9-12,9-12:0,18,0,5:NULL:5,2|6,1|7,1|11,1:203.91:366.612,131.36:1.41185,1.03975:0.0,0.0,1.0	0/0:43:0.946905:7,7:6-7,6-7:7,21,0,14:7,7:2,2|3,4|4,2|6,6:331.615:326.675,113.385:0.498798,0.498798:6.1531e-18,0.02783,0.972222
-chr1	9975875	.	AAACAAACAAAC	.	.	.	END=9975886;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999883:3,3:3-3,3-3:16,23,0,0:3,16:NULL:280.224:366.612,131.36:0.0,0.0:0.0,9.63939e-05,0.999903	0/0:38:1.0:3,3:3-3,3-3:24,11,0,3:3,24:2,3:215.89:326.675,113.385:0.0,0.0:0.0,1.27547e-07,1.0
-chr1	9977198	.	TTTGTTTGTTTG	.	.	.	END=9977209;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:350.953:366.612,131.36:0.0,0.0:0.0,1.5997e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:256.659:326.675,113.385:0.0,0.0:0.0,3.31841e-07,1.0
-chr1	9977219	.	TGTTTGTTTGTT	.	.	.	END=9977230;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:27,30,0,2:3,27:2,2:397.372:366.612,131.36:0.0,0.0:0.0,2.00918e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:257.592:326.675,113.385:0.0,0.0:0.0,8.22526e-08,1.0
-chr1	9978977	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9979014;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.896527:26,26:24-26,24-26:7,14,0,18:26,7:5,2|6,1|8,1|9,1|14,2|15,1|16,1|19,2|20,2|21,1|22,1|24,1|25,2:312.007:366.612,131.36:0.825531,0.825531:0.0,0.0,1.0	0/2:55:0.289981:19,29:19-19,19-32:16,16,0,21:19,16:5,4|7,2|8,2|9,1|10,1|11,3|12,1|13,1|14,1|15,1|17,2|20,1|29,1:399.795:326.675,113.385:0.0,4.91823:2.38919e-27,5.47478e-14,1.0
-chr1	9979016	.	AAAATAAAAATAAAAATA	.	.	.	END=9979033;RU=aaaata;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:22,17,0,0:3,22:NULL:246.388:366.612,131.36:0.0,0.0:0.0,2.00612e-06,1.0	0/0:48:1.0:3,3:3-3,3-3:31,15,0,2:3,31:2,2:269.157:326.675,113.385:0.0,0.0:0.0,1.91913e-09,1.0
-chr1	9980211	.	AAATAAATAAATAAAT	.	.	.	END=9980226;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999921:4,4:4-4,4-4:17,6,0,0:4,17:NULL:119.881:366.612,131.36:0.0,0.0:0.0,4.93888e-05,0.999955	0/0:31:1.00001:4,4:4-4,4-4:22,6,0,3:4,22:3,3:163.046:326.675,113.385:0.0,0.0:0.0,7.88772e-07,1.0
-chr1	9981579	.	AAATAAATAAAT	.	.	.	END=9981590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997694:3,3:3-3,3-3:12,13,0,0:3,12:NULL:166.886:366.612,131.36:0.0,0.0:4.75854e-37,0.00125553,0.998747	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:174.335:326.675,113.385:0.0,0.0:0.0,3.34348e-06,1.0
-chr1	9982246	.	ACACACACACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=9982265;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.972552:15,15:14-16,14-16:13,19,0,6:14,2|15,11:8,2|12,1|13,2|14,1:280.815:366.612,131.36:0.405095,0.405095:0.0,0.0,1.0	0/0:50:0.999953:10,10:9-10,9-10:33,12,0,5:9,5|10,26|11,2:5,1|7,2|8,1|9,1:306.31:326.675,113.385:0.242928,0.242928:7.60741e-36,3.70945e-05,0.999964
-chr1	9982521	.	TTGTTGTTGTTG	.	.	.	END=9982532;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:22,9,0,3:4,22:3,3:193.373:366.612,131.36:0.0,0.0:0.0,9.32828e-07,1.0	0/0:57:1.0:4,4:4-4,4-4:45,9,0,3:4,45:3,3:280.876:326.675,113.385:0.0,0.0:0.0,7.36941e-14,1.0
-chr1	9984525	.	GCAAGAGCAAGAGCAAGA	GCAAGA	.	.	END=9984542;RU=gcaaga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:1.00001:1,1:1-1,1-1:21,19,0,0:1,21:NULL:254.048:366.612,131.36:0.0,0.0:1.0,7.08224e-07,0.0	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:239.768:326.675,113.385:0.0,0.0:0.0,1.29823e-07,1.0
-chr1	9986540	.	TTGTTGTTGTTG	.	.	.	END=9986551;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.00001:4,4:4-4,4-4:23,27,0,3:4,23:3,3:365.923:366.612,131.36:0.0,0.0:0.0,6.35825e-07,1.0	0/0:42:1.0:4,4:4-4,4-4:26,16,0,0:4,26:NULL:243.992:326.675,113.385:0.0,0.0:0.0,1.1716e-07,1.0
-chr1	9987209	.	AATAAATAAATAAATAAATAAATA	.	.	.	END=9987232;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.981668:6,6:5-6,5-6:9,10,0,3:6,9:2,1|4,1|5,1:150.808:366.612,131.36:0.425627,0.425627:1.86629e-24,0.0108559,0.98917	0/0:29:0.99986:6,6:6-6,6-6:16,11,0,2:6,16:5,2:179.84:326.675,113.385:0.0,0.0:6.45e-43,7.34505e-05,0.999926
-chr1	9987535	.	CAAACAAACAAACAAA	.	.	.	END=9987550;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999932:4,4:4-4,4-4:17,11,0,2:4,17:3,2:181.058:366.612,131.36:0.0,0.0:0.0,3.59208e-05,0.999964	0/0:35:0.999911:4,4:4-4,4-4:16,14,0,5:4,16:3,5:226.155:326.675,113.385:0.0,0.0:0.0,4.04958e-05,0.999963
-chr1	9989590	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9989609;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999454:8,8:8-8,8-8:15,8,0,2:8,15:3,1|5,1:155.464:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:36:1.0:5,5:5-5,5-5:26,8,0,2:5,26:3,1|4,1:193.06:326.675,113.385:0.0,0.0:0.0,7.69892e-08,1.0
-chr1	9989921	.	TCATCATCATCA	.	.	.	END=9989932;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:220.703:366.612,131.36:0.0,0.0:0.0,3.39588e-07,1.0	0/0:62:1.0:4,4:4-4,4-4:43,17,0,2:4,43:3,2:346.1:326.675,113.385:0.0,0.0:0.0,4.68102e-13,1.0
-chr1	9990327	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9990360;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.790985:23,23:22-24,22-24:9,20,0,6:22,2|23,7:6,1|13,1|16,1|18,1|19,1|22,1:277.297:366.612,131.36:0.578848,0.578848:0.0,0.0,1.0	0/0:56:0.998586:17,17:16-17,16-17:19,17,0,17:16,3|17,16:4,1|7,1|8,4|9,1|10,4|12,1|13,2|14,1|16,1|17,1:373.085:326.675,113.385:0.21692,0.21692:6.86508e-27,0.0012838,0.998723
-chr1	9993008	.	AAATAAATAAAT	.	.	.	END=9993019;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999925:3,3:3-3,3-3:17,10,0,0:3,17:NULL:156.012:366.612,131.36:0.0,0.0:0.0,4.21511e-05,0.999957	0/0:21:0.999304:3,3:3-3,3-3:14,7,0,0:3,14:NULL:122.489:326.675,113.385:0.0,0.0:0.0,0.00039125,0.999613
-chr1	9996407	.	AATAAATAAATA	.	.	.	END=9996418;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.681:366.612,131.36:0.0,0.0:0.0,1.46403e-06,1.0	0/0:27:0.999931:3,3:3-3,3-3:17,10,0,0:3,17:NULL:153.515:326.675,113.385:0.0,0.0:0.0,4.14139e-05,0.999962
-chr1	9997562	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAACAAACAAA	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.931239:8,8:7-9,7-9:7,23,0,7:8,7:3,1|4,2|6,1|7,3:290.899:366.612,131.36:0.762826,0.762826:0.961227,0.0388423,1.67923e-15	.
-chr1	9997609	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.946889:8,8:6-8,6-8:8,20,0,0:8,8:NULL:217.425:366.612,131.36:0.996022,0.996022:5.08871e-18,0.0405452,0.959521	.
-chr2	2	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:37:0.99925:9,9:9-9,9-9:14,15,0,8:9,14:3,2|5,2|6,1|8,3:257.71:326.675,113.385:0.0,0.0:5.53904e-32,0.000440525,0.999561
-chr2	10	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:34:0.999453:8,8:7-9,7-9:15,15,0,2:8,15:4,1|7,1:216.15:326.675,113.385:0.370196,0.370196:1.5076e-32,0.000343545,0.999659
diff --git a/trtools/mergeSTR/tests/mydir/test_GangSTRRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_GangSTRRightFilecurrent
deleted file mode 120000
index 3cef0ee3..00000000
--- a/trtools/mergeSTR/tests/mydir/test_GangSTRRightFilecurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_GangSTRRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0/test.vcf b/trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0/test.vcf
deleted file mode 100644
index 85eff7a9..00000000
--- a/trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0/test.vcf
+++ /dev/null
@@ -1,2723 +0,0 @@
-##fileformat=VCFv4.1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0358_BXD40_TyJ_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0358_BXD40_TyJ/res_chr1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr10,length=130694993>
-##contig=<ID=chr11,length=122082543>
-##contig=<ID=chr12,length=120129022>
-##contig=<ID=chr13,length=120421639>
-##contig=<ID=chr14,length=124902244>
-##contig=<ID=chr15,length=104043685>
-##contig=<ID=chr16,length=98207768>
-##contig=<ID=chr17,length=94987271>
-##contig=<ID=chr18,length=90702639>
-##contig=<ID=chr19,length=61431566>
-##contig=<ID=chr1,length=195471971>
-##contig=<ID=chr2,length=182113224>
-##contig=<ID=chr3,length=160039680>
-##contig=<ID=chr4,length=156508116>
-##contig=<ID=chr5,length=151834684>
-##contig=<ID=chr6,length=149736546>
-##contig=<ID=chr7,length=145441459>
-##contig=<ID=chr8,length=129401213>
-##contig=<ID=chr9,length=124595110>
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
-##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
-##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
-##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
-##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
-##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
-##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
-##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
-##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
-##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
-##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
-##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	BXD196_0366	BXD40_TyJ_0358
-chr1	3004986	.	TCTGTCTGTCTG	.	.	.	END=3004997;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:0.999912:3,3:3-3,3-3:17,12,0,2:3,17:2,2:193.56:366.612,131.36:0.0,0.0:0.0,5.1188e-05,0.999949	0/0:0.888534:3,3:3-3,3-3:6,4,0,0:3,6:NULL:61.3218:326.675,113.385:0.0,0.0:4.48253e-20,0.0502949,0.949783
-chr1	3005549	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3005568;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:181.959:366.612,131.36:0.0,0.0:0.0,8.11654e-06,0.999994	0/0:0.997039:4,4:4-4,4-4:12,3,0,0:4,12:NULL:73.0332:326.675,113.385:0.0,0.0:1.26878e-38,0.00169958,0.998307
-chr1	3009351	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3009402;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:0.597778:24,24:22-24,22-24:7,10,0,10:23,2|24,5:5,1|6,2|7,1|8,3|9,1|11,1|12,1:204.961:366.612,131.36:0.647588,0.647588:0.977848,0.0221963,7.63327e-09	0/0:0.389735:26,26:24-27,24-27:4,9,0,10:26,4:4,1|5,2|6,1|9,1|12,1|16,1|19,1|22,2:180.81:326.675,113.385:1.00776,1.00776:5.15603e-05,0.319906,0.680058
-chr1	3011925	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATA,TATATATATATATATATATATATATA	.	.	END=3011970;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:0.941159:13,13:11-13,11-13:9,12,0,0:13,9:NULL:154.4:366.612,131.36:0.623055,0.623055:1.0,0.0,0.0	1/1:0.00116485:4,4:2-7,2-7:0,4,0,0:NULL:NULL:36.0216:326.675,113.385:2.01694,2.01694:0.320181,0.553256,0.12662
-chr1	3013640	.	TTTGTTTGTTTGTTTG	.	.	.	END=3013655;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976022:4,4:4-4,4-4:9,4,0,0:4,9:NULL:70.0754:326.675,113.385:0.0,0.0:1.01814e-29,0.0139402,0.986089
-chr1	3021480	.	ATGATGATGATG	.	.	.	END=3021491;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,14,0,0:4,21:NULL:202.925:326.675,113.385:0.0,0.0:0.0,5.06534e-06,0.999995
-chr1	3029298	.	AGAGAGAGAGAG	.	.	.	END=3029309;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:37,14,0,0:6,37:NULL:279.964:326.675,113.385:0.0,0.0:0.0,6.57464e-11,1.0
-chr1	3030350	.	TTTATTTATTTA	.	.	.	END=3030361;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99982:3,3:3-3,3-3:15,11,0,3:3,15:2,3:178.082:326.675,113.385:0.0,0.0:0.0,8.74391e-05,0.999917
-chr1	3034212	.	ATCTATCTATCT	.	.	.	END=3034223;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:295.256:326.675,113.385:0.0,0.0:0.0,1.88135e-07,1.0
-chr1	3045469	.	CACACACACACACACACACACACACACA	.	.	.	END=3045496;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993315:14,14:13-14,13-14:20,21,0,20:13,3|14,17:4,1|5,2|6,2|8,2|9,2|10,3|12,3|13,5:450.41:326.675,113.385:0.21692,0.21692:3.05269e-18,0.00668016,0.993338
-chr1	3050738	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=3050765;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999981:7,7:7-7,7-7:18,9,0,6:7,18:5,5|6,1:198.876:326.675,113.385:0.0,0.0:0.0,1.1874e-05,0.999987
-chr1	3050955	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3051002;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.624164:24,24:23-24,23-24:12,14,0,19:23,4|24,8:5,1|7,2|9,1|11,3|12,1|14,1|16,2|18,3|21,1|22,3|23,1:336.158:326.675,113.385:0.437216,0.437216:1.08153e-07,0.371064,0.628986
-chr1	3051394	.	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	.	.	END=3051533;RU=tttttgg;PERIOD=7;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.735437:6,24:5-14,21-31:6,13,7,34:5,2|6,2|11,2:3,6|4,1|5,6|6,3|7,1|8,2|9,3|10,1|12,2|13,2|14,3|15,1|16,3:567.888:326.675,113.385:2.62352,2.31001:0.0,1.0,0.0
-chr1	3062124	.	ATACATACATACATACATACATACATACATACATACATACATAC	.	.	.	END=3062167;RU=atac;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:11,11:11-11,11-11:33,10,0,24:11,33:2,1|3,2|4,5|5,3|7,5|8,2|9,3|10,3:408.226:326.675,113.385:0.0,0.0:0.0,7.09676e-10,1.0
-chr1	3063324	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	.	.	.	END=3063367;RU=attt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:11,11:3-11,3-11:18,18,0,11:11,18:4,1|5,1|6,1|7,3|8,3|10,2:326.395:326.675,113.385:3.17431,3.17431:3.81225e-40,2.08506e-05,0.999979
-chr1	3068357	.	TGTGTGTGTGTG	.	.	.	END=3068368;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:34,16,0,4:6,34:5,4:310.554:326.675,113.385:0.0,0.0:0.0,2.88506e-10,1.0
-chr1	3072369	.	TTTATTTATTTA	.	.	.	END=3072380;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,14,0,3:3,38:2,3:300.933:326.675,113.385:0.0,0.0:0.0,9.70525e-12,1.0
-chr1	3072798	.	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=3072822;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,24,0,9:5,24:3,6|4,3:383.48:326.675,113.385:0.0,0.0:0.0,2.30288e-07,1.0
-chr1	3074617	.	GAAAGAAAGAAA	.	.	.	END=3074628;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:290.927:326.675,113.385:0.0,0.0:0.0,9.75116e-13,1.0
-chr1	3074661	.	CATGCATGCATGCATG	.	.	.	END=3074676;RU=catg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:34,11,0,0:4,34:NULL:240.772:326.675,113.385:0.0,0.0:0.0,6.64784e-10,1.0
-chr1	3078669	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3078700;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.398947:16,19:16-16,4-19:31,19,0,18:15,4|16,25|17,2:6,2|7,1|8,2|9,4|12,2|13,1|14,3|15,1|18,1|19,1:487.907:326.675,113.385:0.0,5.6364:6.95224e-32,1.39769e-10,1.0
-chr1	3079448	.	TAAATAAATAAA	.	.	.	END=3079459;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,25,0,0:3,34:NULL:363.805:326.675,113.385:0.0,0.0:0.0,9.55245e-10,1.0
-chr1	3079495	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	.	END=3079545;RU=aag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:17,17:17-17,17-17:17,25,0,20:17,17:4,1|6,1|7,1|9,1|10,5|11,2|12,2|13,2|14,1|15,1|16,3:456.172:326.675,113.385:0.220506,0.220506:3.04352e-34,3.54294e-05,0.999964
-chr1	3083387	.	TGACTTGACTTGACT	.	.	.	END=3083401;RU=tgact;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,13,0,3:3,34:2,3:273.285:326.675,113.385:0.0,0.0:0.0,2.83012e-10,1.0
-chr1	3086726	.	ACCCACCCACCC	.	.	.	END=3086737;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,47,0,7:3,19:2,7:542.298:326.675,113.385:0.0,0.0:0.0,1.27627e-05,0.999987
-chr1	3086953	.	AACAACAACAACAAC	.	.	.	END=3086967;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:37,31,0,6:5,37:3,1|4,5:470.789:326.675,113.385:0.0,0.0:0.0,3.12612e-11,1.0
-chr1	3087313	.	GGTTGGTTGGTT	.	.	.	END=3087324;RU=ggtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999862:3,3:3-3,3-3:16,28,0,0:3,16:NULL:319.124:326.675,113.385:0.0,0.0:0.0,0.000130932,0.999872
-chr1	3091604	.	GGGTGGGTGGGT	.	.	.	END=3091615;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999847:3,3:3-3,3-3:16,34,0,0:3,16:NULL:360.367:326.675,113.385:0.0,0.0:0.0,0.000119209,0.999881
-chr1	3095754	.	TCTCTCTCTCTC	.	.	.	END=3095765;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:27,20,0,3:6,27:5,2|6,1:315.128:326.675,113.385:0.139319,0.139319:0.0,2.1589e-08,1.0
-chr1	3095926	.	AAAATAAAATAAAATAAAAT	.	.	.	END=3095945;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:252.882:326.675,113.385:0.0,0.0:0.0,8.81486e-10,1.0
-chr1	3095965	.	CAAACAAACAAA	.	.	.	END=3095976;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:33,20,0,2:3,33:2,2:321.64:326.675,113.385:0.0,0.0:0.0,4.6792e-10,1.0
-chr1	3097482	.	TTGTTGTTGTTGTTG	.	.	.	END=3097496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:33,16,0,2:5,33:3,1|4,1:299.39:326.675,113.385:0.0,0.0:0.0,6.26055e-10,1.0
-chr1	3099936	.	GGGTGGGTGGGT	.	.	.	END=3099947;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994187:3,3:3-3,3-3:10,42,0,4:3,10:2,4:444.101:326.675,113.385:0.0,0.0:2.9741e-31,0.00299531,0.997012
-chr1	3105146	.	GGAAGGAAGGAA	.	.	.	END=3105157;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:265.389:326.675,113.385:0.139319,0.139319:0.0,7.22832e-08,1.0
-chr1	3116455	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	.	END=3116512;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.0319735:29,29:26-29,26-29:0,5,0,2:NULL:14,1|27,1:63.3289:326.675,113.385:0.775065,0.775065:0.170548,0.491322,0.338258
-chr1	3120976	.	TTGTTGTTGTTG	.	.	.	END=3120987;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:45,22,0,3:4,45:3,3:402.864:326.675,113.385:0.0,0.0:0.0,1.57143e-13,1.0
-chr1	3122158	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=3122191;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999857:17,17:9-17,9-17:48,40,0,17:9,3|16,4|17,39|18,2:5,1|8,1|9,3|10,1|12,2|13,1|14,1|15,6|16,1:767.221:326.675,113.385:3.24656,3.24656:0.0,0.000144555,0.999857
-chr1	3122249	.	CAGACAGACAGA	.	.	.	END=3122260;RU=caga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:58,29,0,3:3,58:2,3:515.856:326.675,113.385:0.0,0.0:0.0,7.92967e-18,1.0
-chr1	3125367	.	AACAAACAAACAAACA	.	.	.	END=3125382;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,20,0,5:4,28:3,5:327.977:326.675,113.385:0.0,0.0:0.0,1.31461e-08,1.0
-chr1	3125745	.	TTATTATTATTATTA	.	.	.	END=3125759;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:34,16,0,7:4,2|5,32:3,1|4,6:348.986:326.675,113.385:0.169767,0.169767:0.0,1.65507e-06,1.0
-chr1	3130290	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3130337;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.28766:24,33:24-24,23-33:21,19,0,34:22,2|23,5|24,11|25,3:4,1|7,5|9,2|10,3|12,2|13,3|14,1|15,5|16,3|17,2|18,2|20,2|25,1|26,1|31,1:576.311:326.675,113.385:0.0990099,3.5386:1.17544e-25,2.47281e-10,1.0
-chr1	3131093	.	TGACTGACTGAC	.	.	.	END=3131104;RU=tgac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:46,23,0,0:3,46:NULL:387.79:326.675,113.385:0.0,0.0:0.0,1.31898e-13,1.0
-chr1	3132979	.	CTCCCTCCCTCC	.	.	.	END=3132990;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:246.583:326.675,113.385:0.0,0.0:0.0,6.02507e-09,1.0
-chr1	3134119	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3134160;RU=ttg;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:14,14:14-14,14-14:33,20,0,23:14,33:4,1|5,1|6,1|7,5|8,2|9,5|10,1|11,1|12,5|13,1:503.566:326.675,113.385:0.0,0.0:0.0,6.14385e-10,1.0
-chr1	3153384	.	AATAAATAAATA	.	.	.	END=3153395;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99958:3,3:3-3,3-3:14,8,0,3:3,14:2,3:150.528:326.675,113.385:0.0,0.0:1.58e-43,0.000173232,0.999827
-chr1	3161509	.	GGGTGGGTGGGT	.	.	.	END=3161520;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.458435:3,3:2-3,2-3:3,30,0,3:3,3:2,3:309.733:326.675,113.385:0.429525,0.429525:5.10445e-09,0.356641,0.643398
-chr1	3162873	.	TGCTGCTGCTGC	.	.	.	END=3162884;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,13,0,0:4,30:NULL:235.308:326.675,113.385:0.0,0.0:0.0,7.52117e-09,1.0
-chr1	3163213	.	ATTCTATTCTATTCT	.	.	.	END=3163227;RU=attct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999735:3,3:3-3,3-3:15,5,0,0:3,15:NULL:107.258:326.675,113.385:0.0,0.0:0.0,0.000138567,0.999864
-chr1	3164426	.	TCTTCCTCTTCCTCTTCC	.	.	.	END=3164443;RU=tcttcc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999874:3,3:3-3,3-3:15,20,0,3:3,15:2,3:272.773:326.675,113.385:0.0,0.0:0.0,0.000119291,0.999881
-chr1	3164472	.	TCATCATCATCATCA	.	.	.	END=3164486;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:5,5:5-5,5-5:19,10,0,0:5,19:NULL:171.622:326.675,113.385:0.0,0.0:0.0,1.43699e-05,0.999986
-chr1	3166251	.	AAACAAACAAAC	.	.	.	END=3166262;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:185.606:326.675,113.385:0.0,0.0:0.0,1.43407e-06,1.0
-chr1	3169195	.	GTAGTAGTAGTA	.	.	.	END=3169206;RU=gta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:23,5,0,0:4,23:NULL:131.731:326.675,113.385:0.0,0.0:0.0,8.37304e-07,1.0
-chr1	3169225	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=3169258;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998848:17,17:10-17,10-17:14,6,0,8:17,14:5,1|7,1|8,1|13,2|14,1|16,2:177.981:326.675,113.385:3.49571,3.49571:7.17539e-19,0.000371304,0.999629
-chr1	3169275	.	AATAAATAAATA	.	.	.	END=3169286;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996749:3,3:3-3,3-3:11,8,0,3:3,11:2,3:136.283:326.675,113.385:0.0,0.0:5.49383e-36,0.00126031,0.998746
-chr1	3170541	.	ACAAAACAAAACAAAACAAA	.	.	.	END=3170560;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:303.202:326.675,113.385:0.0,0.0:0.0,1.04162e-07,1.0
-chr1	3180457	.	GGGTGGGTGGGT	.	.	.	END=3180468;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998747:3,3:3-3,3-3:13,26,0,0:3,13:NULL:272.37:326.675,113.385:0.0,0.0:5.06635e-39,0.000898473,0.999104
-chr1	3184125	.	ACACACACACACACACACACACACACAC	.	.	.	END=3184152;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.714594:14,14:13-14,13-14:18,5,0,15:13,5|14,13:5,1|6,2|7,5|8,2|11,3|13,2:253.613:326.675,113.385:0.458235,0.458235:1.65788e-13,0.285296,0.714708
-chr1	3184524	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=3184541;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,14,0,5:6,23:3,1|5,4:254.377:326.675,113.385:0.139319,0.139319:0.0,3.86922e-07,1.0
-chr1	3185654	.	AGAGAGAGAGAG	.	.	.	END=3185665;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,14,0,0:6,21:NULL:210.56:326.675,113.385:0.0,0.0:0.0,2.89898e-06,1.0
-chr1	3188551	.	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	.	.	.	END=3188606;RU=gcttttt;PERIOD=7;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.932444:8,8:8-8,8-8:6,15,0,18:8,6:3,6|4,4|5,2|6,2|7,2|8,2:285.442:326.675,113.385:0.0,0.0:8.04339e-25,0.0264434,0.973607
-chr1	3189480	.	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=3189527;RU=tta;PERIOD=3;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980651:16,16:15-16,15-16:9,11,0,11:16,9:4,1|5,2|8,1|9,1|10,1|12,1|13,1|14,1|15,2:228.914:326.675,113.385:0.36513,0.36513:4.46609e-12,0.00943155,0.990589
-chr1	3190239	.	TTTGTTTGTTTGTTTG	.	.	.	END=3190254;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,10,0,3:4,19:3,3:194.354:326.675,113.385:0.0,0.0:0.0,4.98852e-06,0.999995
-chr1	3192683	.	GTGTGTGTGTGTGT	.	.	.	END=3192696;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999933:7,7:7-7,7-7:17,10,0,4:7,17:5,3|6,1:188.688:326.675,113.385:0.0,0.0:2.69012e-33,3.3069e-05,0.99997
-chr1	3192934	.	TATATATATATATA	.	.	.	END=3192947;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,8,0,0:7,22:NULL:161.681:326.675,113.385:0.139319,0.139319:1.59678e-37,2.31998e-06,1.0
-chr1	3193519	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3193554;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.357509:18,28:18-22,19-29:6,24,0,20:17,2|18,4:6,2|9,3|10,4|11,2|12,1|14,1|15,1|16,1|17,1|18,2|20,1|28,1:421.12:326.675,113.385:1.11332,3.06777:6.2436e-31,8.09123e-05,0.999919
-chr1	3194182	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194229;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.309339:24,28:17-25,17-28:3,13,0,24:24,3:5,1|9,1|12,1|13,1|14,3|15,3|17,4|18,2|20,2|21,1|22,1|23,2|24,1|28,1:323.096:326.675,113.385:1.47355,2.81063:2.01499e-19,5.77486e-05,0.999942
-chr1	3194304	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194333;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.303584:15,37:15-16,19-39:15,9,0,15:14,2|15,11|16,2:5,1|8,1|9,1|10,1|11,1|16,3|17,1|18,1|19,1|21,1|22,1|35,1|37,1:292.474:326.675,113.385:0.195027,4.9142:0.0,5.51792e-15,1.0
-chr1	3198131	.	AAAAAACAAAAAACAAAAAAC	.	.	.	END=3198151;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999434:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.589:326.675,113.385:0.0,0.0:0.0,0.000348704,0.999652
-chr1	3207640	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=3207663;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985475:6,6:6-6,6-6:9,16,0,9:6,9:3,2|4,3|5,4:247.302:326.675,113.385:0.0,0.0:3.58493e-26,0.0070461,0.992971
-chr1	3209528	.	AAAAACAAAAACAAAAACAAAAAC	.	.	.	END=3209551;RU=aaaaac;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,10,0,4:4,21:2,1|3,3:203.768:326.675,113.385:0.0,0.0:0.0,1.48659e-06,1.0
-chr1	3209577	.	AACAAAACAAAACAA	.	.	.	END=3209591;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:195.055:326.675,113.385:0.0,0.0:0.0,3.04889e-07,1.0
-chr1	3212208	.	TATTTATTTATT	.	.	.	END=3212219;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999844:3,3:3-3,3-3:16,11,0,0:3,16:NULL:161.29:326.675,113.385:0.0,0.0:0.0,8.8955e-05,0.999911
-chr1	3219276	.	ATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=3219308;RU=att;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.652411:11,11:10-11,10-11:5,7,0,0:11,5:NULL:87.0853:326.675,113.385:0.486863,0.486863:2.85734e-08,0.237372,0.76265
-chr1	3224265	.	AAACAAACAAAC	.	.	.	END=3224276;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,12,0,0:3,19:NULL:180.318:326.675,113.385:0.0,0.0:0.0,1.19101e-05,0.999987
-chr1	3229231	.	AACAAAACAAAACAAAACAAAACAA	.	.	.	END=3229255;RU=aacaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999593:5,5:5-5,5-5:14,8,0,8:5,14:2,1|3,2|4,5:184.138:326.675,113.385:0.0,0.0:1.17395e-36,0.000157612,0.999843
-chr1	3230661	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3230700;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.977378:19,20:17-21,19-21:8,15,0,15:19,4|20,4:4,1|6,1|7,3|8,1|9,1|11,1|12,1|13,1|14,2|16,1|17,1|18,1:301.046:326.675,113.385:0.922547,0.601276:0.000508468,0.979059,0.0204738
-chr1	3247218	.	AAAACAAAACAAAAC	.	.	.	END=3247232;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99952:3,3:3-3,3-3:14,8,0,2:3,14:2,2:141.793:326.675,113.385:0.0,0.0:6e-45,0.000223836,0.99978
-chr1	3248425	.	TTGCTTGCTTGCTTGC	.	.	.	END=3248440;RU=ttgc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,14,0,0:4,28:NULL:236.422:326.675,113.385:0.0,0.0:0.0,3.28777e-08,1.0
-chr1	3250571	.	ACCACCACCACCACC	.	.	.	END=3250585;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:27,12,0,0:5,27:NULL:215.956:326.675,113.385:0.169767,0.169767:0.0,8.70194e-08,1.0
-chr1	3256241	.	AAACAAACAAAC	.	.	.	END=3256252;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:200.029:326.675,113.385:0.0,0.0:0.0,5.2323e-09,1.0
-chr1	3257455	.	GAAGAAGAAGAAGAA	.	.	.	END=3257469;RU=gaa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:30,8,0,0:5,30:NULL:194.078:326.675,113.385:0.0,0.0:0.0,1.01573e-08,1.0
-chr1	3263762	.	ACCCACCCACCC	.	.	.	END=3263773;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99999:3,3:3-3,3-3:18,5,0,0:3,18:NULL:118.308:326.675,113.385:0.0,0.0:0.0,1.72567e-05,0.999986
-chr1	3266661	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=3266706;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.969164:23,23:13-23,13-23:16,11,0,12:22,3|23,13:6,1|12,1|14,2|15,1|16,1|17,1|19,1|20,1|22,3:271.086:326.675,113.385:4.42132,4.42132:2.23068e-12,0.0300615,0.969994
-chr1	3266707	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3266746;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.307853:20,21:20-20,15-22:11,11,0,13:20,11:5,1|7,1|10,1|14,1|16,1|17,1|18,1|19,5|21,1:255.799:326.675,113.385:0.0,1.50169:6.83388e-24,2.67566e-08,1.0
-chr1	3283714	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=3283733;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:19,10,0,6:5,19:2,1|3,1|4,4:218.899:326.675,113.385:0.311527,0.311527:0.0,8.6473e-06,0.999994
-chr1	3284144	.	AACCAACCAACC	.	.	.	END=3284155;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999893:3,3:3-4,3-4:16,5,0,0:3,16:NULL:107.814:326.675,113.385:0.425627,0.425627:0.0,5.48176e-05,0.999948
-chr1	3284442	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3284483;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.302197:21,33:21-21,21-33:18,9,0,12:21,18:5,1|13,1|14,1|15,1|17,1|18,1|19,3|20,2|33,1:272.176:326.675,113.385:0.0,6.07264:2.65257e-24,2.95194e-07,1.0
-chr1	3284513	.	TGAATGAATGAATGAATGAATGAA	.	.	.	END=3284536;RU=tgaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:26,10,0,5:6,26:2,1|3,2|5,2:234.8:326.675,113.385:0.0,0.0:0.0,7.37534e-08,1.0
-chr1	3286188	.	CATCATCATCAT	.	.	.	END=3286199;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999774:4,4:4-4,4-4:15,11,0,2:4,15:3,2:169.069:326.675,113.385:0.0,0.0:0.0,0.000113157,0.999888
-chr1	3287342	.	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	.	.	END=3287441;RU=tctcc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0230831:12,12:5-15,5-15:0,6,0,9:NULL:5,2|7,1|9,3|10,1|11,1|12,1:120.258:326.675,113.385:4.65146,4.65146:1.0,0.0,0.0
-chr1	3287445	.	TCCCCCTCCCCCTCCCCCTCCCCC	.	.	.	END=3287468;RU=tccccc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.937132:4,4:4-4,4-4:8,8,0,0:4,8:NULL:109.373:326.675,113.385:0.29703,0.29703:6.49485e-17,0.047431,0.952645
-chr1	3287528	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	.	END=3287583;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.869864:14,14:14-15,14-15:6,7,0,10:14,6:2,1|8,3|9,2|10,1|13,3:162.679:326.675,113.385:0.45695,0.45695:3.90143e-11,0.0418628,0.958209
-chr1	3298789	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3298808;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,18,0,3:4,26:3,3:286.097:326.675,113.385:0.0,0.0:0.0,6.66746e-08,1.0
-chr1	3308941	.	AAAATAAAATAAAATAAAATAAAATAAAAT	.	.	.	END=3308970;RU=aaaat;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959181:6,6:6-6,6-6:8,6,0,0:6,8:NULL:84.4534:326.675,113.385:0.0,0.0:8.40327e-25,0.0235629,0.976482
-chr1	3309296	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	.	END=3309339;RU=ttct;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.950048:11,11:11-11,11-11:8,7,0,3:11,8:4,1|7,1|8,1:122.558:326.675,113.385:0.0,0.0:2.46773e-21,0.030773,0.969285
-chr1	3311045	.	AAGAAAAAGAAAAAGAAA	.	.	.	END=3311062;RU=aagaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,9,0,2:3,22:2,2:180.68:326.675,113.385:0.0,0.0:0.0,1.03504e-06,1.0
-chr1	3317551	.	TAAATAAATAAA	.	.	.	END=3317562;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.469645:3,3:1-3,1-3:3,5,0,0:3,3:NULL:57.5009:326.675,113.385:0.339533,0.339533:2.24631e-09,0.263676,0.736329
-chr1	3317572	.	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	TATATA	.	.	END=3317629;RU=ta;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.00090688:3,3:1-3,1-3:0,2,0,0:NULL:NULL:19.0558:326.675,113.385:0.851255,0.851255:0.262426,0.580756,0.156859
-chr1	3317629	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=3317664;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.0227178:18,18:18-18,18-18:0,1,0,0:NULL:NULL:9.12935:326.675,113.385:0.0,0.0:0.187493,0.491102,0.321513
-chr1	3318469	.	TTTTGTTTTGTTTTG	.	.	.	END=3318483;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:233.804:326.675,113.385:0.0,0.0:0.0,1.73051e-07,1.0
-chr1	3319830	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3319850;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999541:7,7:7-7,7-7:14,11,0,4:7,14:4,1|5,1|6,2:186.226:326.675,113.385:0.0,0.0:2.56804e-37,0.000211661,0.999789
-chr1	3325716	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=3325743;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.659866:14,14:14-14,14-14:5,10,0,0:14,5:NULL:112.97:326.675,113.385:0.29703,0.29703:2.65894e-06,0.2113,0.78875
-chr1	3327145	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3327194;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.289986:25,28:24-25,23-28:10,8,0,17:23,2|25,8:5,2|7,1|8,1|10,1|12,1|13,1|14,3|15,1|16,1|17,1|21,1|23,1|24,1|28,1:268.127:326.675,113.385:0.240494,2.03792:2.52992e-12,1.94684e-05,0.99998
-chr1	3327251	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	.	END=3327290;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-11,10-11:19,6,0,7:10,19:2,1|5,1|9,5:185.78:326.675,113.385:0.270063,0.270063:7.3456e-41,6.86667e-06,0.999994
-chr1	3339592	.	GAGAGAGAGAGAGAGAGAGA	.	.	.	END=3339611;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991072:10,10:10-11,10-11:11,8,0,2:10,11:5,1|7,1:134.709:326.675,113.385:0.442343,0.442343:7.4509e-22,0.00419897,0.99581
-chr1	3339980	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=3340011;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999453:8,8:8-8,8-8:14,9,0,4:8,14:5,1|6,1|7,2:163.819:326.675,113.385:0.0,0.0:1.3722e-41,0.000249176,0.999751
-chr1	3340203	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=3340226;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992594:6,6:6-6,6-6:10,10,0,4:6,10:3,2|5,2:158.865:326.675,113.385:0.0,0.0:2.79459e-24,0.00326886,0.996739
-chr1	3342039	.	CATGCATGCATG	.	.	.	END=3342050;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.955581:3,3:3-3,3-3:8,3,0,0:3,8:NULL:61.7549:326.675,113.385:0.0,0.0:8.05459e-27,0.0209154,0.979125
-chr1	3342663	.	ATAAATAAATAA	.	.	.	END=3342674;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:133.089:326.675,113.385:0.0,0.0:2.13385e-34,2.63915e-05,0.999978
-chr1	3355412	.	ATGTATGTATGT	.	.	.	END=3355423;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:278.085:326.675,113.385:0.0,0.0:0.0,6.5236e-08,1.0
-chr1	3357227	.	TTATTTATTTAT	.	.	.	END=3357238;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.327:326.675,113.385:0.0,0.0:0.0,6.20079e-07,1.0
-chr1	3360114	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=3360159;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.636893:23,23:21-24,21-24:5,12,0,17:23,5:4,1|7,1|8,1|9,1|10,1|11,1|12,2|14,3|15,1|16,2|19,1|20,1|21,1:271.022:326.675,113.385:0.905494,0.905494:7.81328e-06,0.17981,0.820249
-chr1	3361293	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=3361348;RU=ct;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.931998:28,28:27-29,27-29:8,11,0,13:28,8:5,1|12,2|15,1|16,1|18,1|19,1|21,1|24,3|25,1|27,1:244.907:326.675,113.385:0.48807,0.48807:4.27324e-11,0.032789,0.967271
-chr1	3361348	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=3361393;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979008:23,23:20-23,20-23:9,15,0,14:23,9:5,1|6,1|7,1|9,1|10,1|11,1|12,1|13,2|14,2|18,1|22,2:290.388:326.675,113.385:1.18481,1.18481:2.84686e-16,0.0140861,0.985942
-chr1	3365708	.	TTTCTTTCTTTC	.	.	.	END=3365719;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999884:3,3:3-3,3-3:16,5,0,3:3,16:2,3:132.662:326.675,113.385:0.0,0.0:1.3774e-39,4.05224e-05,0.999963
-chr1	3365944	.	TGTGTGTGTGTG	.	.	.	END=3365955;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:20,13,0,2:6,20:5,2:212.768:326.675,113.385:0.0,0.0:0.0,3.18577e-06,1.0
-chr1	3386948	.	TCTTTCTTTCTT	.	.	.	END=3386959;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999936:3,3:3-3,3-3:17,11,0,0:3,17:NULL:170.847:326.675,113.385:0.0,0.0:0.0,4.5359e-05,0.999956
-chr1	3388595	.	ACTTCACTTCACTTC	.	.	.	END=3388609;RU=acttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:232.247:326.675,113.385:0.0,0.0:0.0,1.93775e-06,1.0
-chr1	3390191	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=3390216;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999873:13,13:12-13,12-13:30,8,0,7:12,4|13,26:5,1|7,1|10,1|11,3|12,1:265.253:326.675,113.385:0.236383,0.236383:7.1e-44,0.00012746,0.999873
-chr1	3393075	.	ACACACACACACAC	.	.	.	END=3393088;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:25,19,0,2:7,25:6,2:296.677:326.675,113.385:0.0990099,0.0990099:0.0,3.55528e-07,1.0
-chr1	3395163	.	AAGAAAGAAAGA	.	.	.	END=3395174;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:18,14,0,3:3,18:2,3:217.461:326.675,113.385:0.0,0.0:0.0,9.75855e-06,0.999993
-chr1	3403481	.	TATATATATATATATATA	.	.	.	END=3403498;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.956424:9,9:8-9,8-9:9,11,0,0:9,9:NULL:138.289:326.675,113.385:0.21692,0.21692:5.35994e-12,0.0302066,0.969851
-chr1	3403725	.	ACCACCACCACC	.	.	.	END=3403736;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:33,15,0,0:4,33:NULL:271.867:326.675,113.385:0.0,0.0:0.0,1.89479e-09,1.0
-chr1	3405593	.	TATTTATTTATT	.	.	.	END=3405604;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999792:3,3:3-3,3-3:15,6,0,2:3,15:2,2:129.67:326.675,113.385:0.0,0.0:0.0,8.11512e-05,0.999919
-chr1	3405717	.	AACAACAACAAC	.	.	.	END=3405728;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999896:4,4:4-4,4-4:16,12,0,4:4,16:3,4:203.848:326.675,113.385:0.0,0.0:0.0,5.05573e-05,0.999949
-chr1	3407095	.	AAAATAAAATAAAAT	.	.	.	END=3407109;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,14,0,2:3,27:2,2:251.859:326.675,113.385:0.0,0.0:0.0,3.11129e-08,1.0
-chr1	3408522	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	.	END=3408561;RU=gaaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.824507:10,10:9-10,9-10:14,19,0,8:9,2|10,12:7,1|8,2|9,5:296.651:326.675,113.385:0.469019,0.469019:6.06932e-23,0.175327,0.824741
-chr1	3408702	.	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3408745;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99681:22,22:22-23,22-23:13,11,0,15:22,13:4,1|6,1|7,1|8,1|9,3|12,1|14,1|15,2|16,2|19,1|21,1:274.457:326.675,113.385:0.284901,0.284901:2.11754e-16,0.000787401,0.999217
-chr1	3412976	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3413019;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.371156:22,24:21-24,21-24:4,17,0,15:21,2|22,2:6,1|7,1|9,1|11,2|12,1|13,1|15,1|16,1|19,1|21,2|22,2|24,1:301.446:326.675,113.385:0.661813,1.29601:9.28366e-23,0.0855846,0.914515
-chr1	3413022	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3413083;RU=tc;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.663264:29,31:29-31,30-31:8,16,0,6:29,3|30,2|31,3:5,1|10,1|14,1|23,1|26,1|31,1:243.069:326.675,113.385:0.638134,0.284901:1.47557e-10,0.955712,0.0443579
-chr1	3413143	.	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3413186;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.718486:22,22:21-22,21-22:5,13,0,9:22,5:5,1|7,1|11,2|12,1|18,1|19,1|20,1|21,1:216.602:326.675,113.385:0.442564,0.442564:1.43829e-06,0.128759,0.871339
-chr1	3415813	.	TAAATAAATAAA	.	.	.	END=3415824;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.329:326.675,113.385:0.0,0.0:0.0,2.02195e-06,1.0
-chr1	3418452	.	ATGTATGTATGT	.	.	.	END=3418463;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999963:3,3:3-3,3-3:18,9,0,0:3,18:NULL:159.97:326.675,113.385:0.0,0.0:0.0,2.95723e-05,0.999971
-chr1	3419362	.	CCTACCTACCTA	.	.	.	END=3419373;RU=ccta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:168.082:326.675,113.385:0.0,0.0:0.0,9.83807e-09,1.0
-chr1	3427014	.	TATCTATCTATC	.	.	.	END=3427025;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.991:326.675,113.385:0.0,0.0:0.0,3.03433e-07,1.0
-chr1	3437788	.	AAACAAACAAAC	.	.	.	END=3437799;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,8,0,2:3,28:2,2:198.144:326.675,113.385:0.0,0.0:0.0,8.29792e-09,1.0
-chr1	3440889	.	AATAAATAAATA	.	.	.	END=3440900;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:119.376:326.675,113.385:0.0,0.0:0.0,2.36557e-06,1.0
-chr1	3442170	.	CCACCACCACCACCA	.	.	.	END=3442184;RU=cca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993269:5,5:5-5,5-5:11,15,0,0:5,11:NULL:183.557:326.675,113.385:0.0,0.0:4.64275e-28,0.00515572,0.994858
-chr1	3444468	.	AAGGAAGGAAGGAAGG	.	.	.	END=3444483;RU=aagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,10,0,0:4,20:NULL:165.675:326.675,113.385:0.0,0.0:0.0,9.72115e-06,0.999993
-chr1	3452271	.	TTTGTTTGTTTG	.	.	.	END=3452282;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,4,0,0:3,27:NULL:140.314:326.675,113.385:0.0,0.0:0.0,3.06181e-08,1.0
-chr1	3452589	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=3452612;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:24,12,0,0:4,24:NULL:204.184:326.675,113.385:0.270063,0.270063:0.0,7.76877e-07,1.0
-chr1	3459217	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	.	END=3459272;RU=atct;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999734:14,14:14-14,14-14:15,29,0,23:14,15:2,2|4,2|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2|13,4:499.709:326.675,113.385:0.0,0.0:2.04347e-33,0.00020263,0.999797
-chr1	3460396	.	GGGACGGGACGGGAC	.	.	.	END=3460410;RU=gggac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990023:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6133:326.675,113.385:0.0,0.0:6.37805e-33,0.00536677,0.994647
-chr1	3462940	.	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=3462963;RU=gttt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999933:6,6:6-6,6-6:16,21,0,7:6,16:3,3|4,1|5,3:303.228:326.675,113.385:0.0,0.0:0.0,4.7846e-05,0.999955
-chr1	3470981	.	CACACACACACACACACACACACA	.	.	.	END=3471004;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997233:12,12:10-12,10-12:12,11,0,12:12,12:6,2|7,1|9,3|10,3|11,3:246.658:326.675,113.385:0.422855,0.422855:8.55909e-17,0.00120403,0.9988
-chr1	3478864	.	ACACACACACACACACAC	.	.	.	END=3478881;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.455559:9,9:8-9,8-9:12,7,0,4:8,2|9,10:6,1|8,3:155.419:326.675,113.385:0.491073,0.491073:7.61899e-16,0.543848,0.456264
-chr1	3481278	.	TTTGTTTGTTTGTTTG	.	.	.	END=3481293;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,8,0,6:4,28:3,6:224.482:326.675,113.385:0.0,0.0:0.0,8.98187e-09,1.0
-chr1	3483580	.	ACACACACACACACACACACACACACAC	.	.	.	END=3483607;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:14,14:14-14,14-14:40,15,0,12:12,3|13,4|14,31|15,2:4,1|5,1|6,4|7,1|8,1|10,1|11,1|13,2:431.313:326.675,113.385:0.19802,0.19802:1.95358e-39,5.81579e-06,0.999995
-chr1	3487177	.	CCATCCATCCAT	.	.	.	END=3487188;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:211.739:326.675,113.385:0.0,0.0:0.0,4.44959e-06,0.999995
-chr1	3487959	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=3487988;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984228:15,15:15-16,15-16:10,16,0,6:15,10:5,1|8,1|12,1|14,2|15,1:242.817:326.675,113.385:0.270063,0.270063:5.38519e-19,0.0034699,0.996541
-chr1	3487988	.	TATATATATATATATATATATATATATATATA	.	.	.	END=3488019;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.944694:16,16:15-17,15-17:9,10,0,0:16,9:NULL:136.375:326.675,113.385:0.4771,0.4771:1.98586e-11,0.0365298,0.963536
-chr1	3490427	.	GCGCGCGCGCGCGC	.	.	.	END=3490440;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:30,15,0,0:7,30:NULL:258.92:326.675,113.385:0.278639,0.278639:4.9453e-41,1.68511e-08,1.0
-chr1	3491872	.	CACACACACACA	CACACACACA	.	.	END=3491883;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.986961:5,6:5-6,6-6:7,18,0,0:5,2|6,5:NULL:198.102:326.675,113.385:0.452422,0.0:5.90355e-10,0.98821,0.0118178
-chr1	3494930	.	CATTCATTCATTCATTCATTCATT	.	.	.	END=3494953;RU=catt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,15,0,10:6,22:3,4|4,4|5,2:295.517:326.675,113.385:0.0,0.0:0.0,1.17652e-06,1.0
-chr1	3496471	.	TTCTTTTCTTTTCTT	.	.	.	END=3496485;RU=ttctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997268:3,3:1-3,1-3:12,8,0,0:3,12:NULL:120.166:326.675,113.385:0.991682,0.991682:7.039e-42,0.00157585,0.998429
-chr1	3496603	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3496632;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984143:15,15:14-16,14-16:16,6,0,6:14,3|15,13:5,1|6,1|9,1|11,2|14,1:177.115:326.675,113.385:0.281439,0.281439:8.76319e-15,0.0152588,0.984773
-chr1	3499569	.	ACCCACCCACCC	.	.	.	END=3499580;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997556:3,3:3-3,3-3:12,6,0,0:3,12:NULL:97.0083:326.675,113.385:0.0,0.0:3.21421e-31,0.00127003,0.998733
-chr1	3507557	.	ACAGACAGACAGACAGACAG	.	.	.	END=3507576;RU=acag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:5,5:5-5,5-5:17,11,0,5:5,17:3,1|4,4:205.65:326.675,113.385:0.0,0.0:1.1e-44,2.35347e-05,0.999979
-chr1	3507759	.	AACAACAACAAC	.	.	.	END=3507770;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,9,0,3:4,23:3,3:195.863:326.675,113.385:0.0,0.0:0.0,3.21403e-07,1.0
-chr1	3509243	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3509290;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.889263:24,24:24-25,24-25:10,11,0,13:23,2|24,8:5,1|7,1|8,1|10,2|13,1|16,1|18,1|19,1|22,1|23,3:253.622:326.675,113.385:0.275098,0.275098:9.72665e-08,0.0958738,0.904227
-chr1	3509605	.	AAACAAAACAAAACA	.	.	.	END=3509619;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999027:3,3:3-3,3-3:13,6,0,0:3,13:NULL:106.151:326.675,113.385:0.0,0.0:1.49e-43,0.000556877,0.999446
-chr1	3510223	.	AAATAAATAAAT	.	.	.	END=3510234;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999264:3,3:3-3,3-3:13,12,0,3:3,13:2,3:182.213:326.675,113.385:0.0,0.0:2.11445e-40,0.000337643,0.999666
-chr1	3518996	.	TATTATTATTATTATTATTATTATTATTATTATTATTAT	.	.	.	END=3519034;RU=tat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.95199:13,13:13-14,13-14:8,10,0,8:13,8:4,1|5,1|6,1|7,1|9,1|11,1|12,2:187.125:326.675,113.385:0.46122,0.46122:2.83563e-14,0.0151482,0.984883
-chr1	3519121	.	ACTCACTCACTC	.	.	.	END=3519132;RU=actc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:172.558:326.675,113.385:0.0,0.0:0.0,4.38183e-07,1.0
-chr1	3523067	.	TAATAATAATAATAATAATAATAATAA	.	.	.	END=3523093;RU=taa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.461444:9,9:9-10,9-10:20,11,0,7:9,17|10,3:5,1|6,1|7,2|8,3:250.211:326.675,113.385:0.499387,0.499387:4.041e-34,3.47245e-06,1.0
-chr1	3527389	.	CATCCATCCATC	.	.	.	END=3527400;RU=catc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:317.531:326.675,113.385:0.0,0.0:0.0,1.12177e-10,1.0
-chr1	3529807	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	.	.	.	END=3529850;RU=aaat;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999428:11,11:11-11,11-11:14,8,0,6:11,14:3,1|5,1|7,1|9,2|10,1:177.812:326.675,113.385:0.0,0.0:4.52009e-32,0.000279724,0.999721
-chr1	3530404	.	TATTATTATTATTATTATTATTATTATTATTATTATTATTAT	.	.	.	END=3530445;RU=tat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992469:14,14:14-15,14-15:11,18,0,12:14,11:3,2|5,1|6,1|7,3|8,1|11,3|13,1:304.679:326.675,113.385:0.298675,0.298675:2.55207e-16,0.00392428,0.996088
-chr1	3537894	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=3537913;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.975432:10,10:9-11,9-11:15,8,0,4:9,2|10,13:5,1|7,1|8,1|9,1:171.686:326.675,113.385:0.43384,0.43384:2.5878e-18,0.0243184,0.975727
-chr1	3540990	.	TGTTGTTGTTGTTGT	.	.	.	END=3541004;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:31,13,0,3:5,31:4,3:261.497:326.675,113.385:0.0,0.0:0.0,1.72273e-09,1.0
-chr1	3541012	.	TTGTTTTTTGTTTTTTGTTTT	.	.	.	END=3541032;RU=ttgtttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:225.609:326.675,113.385:0.0,0.0:0.0,7.44215e-08,1.0
-chr1	3554787	.	GTGTGTGTGTGTGTGT	.	.	.	END=3554802;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98132:8,8:8-17,8-17:31,13,0,5:8,31:5,1|6,1|7,2|15,1:304.298:326.675,113.385:3.80811,3.80811:0.0,2.92854e-09,1.0
-chr1	3555544	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3555593;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.260705:25,27:22-25,22-27:2,8,0,10:25,2:8,1|10,2|12,1|13,1|18,1|19,1|22,1|24,1|27,1:166.814:326.675,113.385:1.14218,1.93736:2.32776e-09,0.0255083,0.974539
-chr1	3559181	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=3559216;RU=tc;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.766734:18,18:16-18,16-18:6,8,0,5:18,6:5,2|12,1|14,1|16,1:138.427:326.675,113.385:0.74567,0.74567:7.06198e-09,0.110577,0.889519
-chr1	3559217	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3559264;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.274637:24,32:24-25,24-33:4,8,0,18:24,4:5,1|7,1|9,2|11,1|12,1|14,3|16,2|19,1|20,2|22,1|23,1|25,1|32,1:237.468:326.675,113.385:0.412766,3.4929:4.38113e-20,9.92807e-07,1.0
-chr1	3559288	.	TCTCTCTCTCTC	.	.	.	END=3559299;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983739:6,6:6-16,6-16:32,4,0,2:6,32:5,1|14,1:195.327:326.675,113.385:3.76974,3.76974:0.0,1.15641e-09,1.0
-chr1	3560915	.	AAACAAACAAACAAACAAAC	.	.	.	END=3560934;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,12,0,4:5,23:4,3|5,1:230.346:326.675,113.385:0.0,0.0:0.0,2.06752e-07,1.0
-chr1	3567195	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3567244;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.573095:25,26:10-25,10-26:6,8,0,7:24,2|25,4:6,1|7,1|8,1|14,1|17,1|21,1|26,1:169.038:326.675,113.385:7.14562,7.63548:2.708e-11,0.0172721,0.982767
-chr1	3568471	.	GATGGATGGATG	.	.	.	END=3568482;RU=gatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,9,0,0:3,25:NULL:180.427:326.675,113.385:0.0,0.0:0.0,1.92562e-07,1.0
-chr1	3569699	.	GAGGAGGAGGAG	.	.	.	END=3569710;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:247.882:326.675,113.385:0.0990099,0.0990099:0.0,2.60625e-08,1.0
-chr1	3570098	.	CAAAACAAAACAAAA	.	.	.	END=3570112;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:245.567:326.675,113.385:0.0,0.0:0.0,7.38688e-08,1.0
-chr1	3570893	.	ATATCATATCATATATATCATATCATATATATCATATCATAT	.	.	.	END=3570934;RU=atatcatatcatat;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994483:3,3:3-3,3-3:11,10,0,2:3,11:2,2:148.089:326.675,113.385:0.0,0.0:7.66727e-14,0.00376926,0.99624
-chr1	3574648	.	CACACACACACACACACACACACA	.	.	.	END=3574671;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:12,12:5-12,5-12:20,21,0,5:12,20:7,1|8,1|9,2|11,1:323.513:326.675,113.385:2.41896,2.41896:2.44051e-28,1.74376e-05,0.999986
-chr1	3575668	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3575713;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.278433:23,28:23-23,22-31:14,24,0,22:22,4|23,10:4,2|5,1|7,2|8,3|9,1|10,1|11,1|12,1|13,3|14,2|15,1|18,1|19,2|28,1:485.687:326.675,113.385:0.0,3.12812:3.576e-14,0.000275774,0.999727
-chr1	3576109	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=3576152;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:11,11:11-11,11-11:24,18,0,17:11,24:3,4|5,3|6,1|7,1|8,2|9,2|10,4:388.513:326.675,113.385:0.0,0.0:1.17738e-30,7.58134e-07,1.0
-chr1	3576169	.	TAAATAAATAAATAAATAAATAAA	.	.	.	END=3576192;RU=taaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:32,18,0,6:6,32:3,2|4,1|5,3:335.677:326.675,113.385:0.0,0.0:0.0,1.09011e-09,1.0
-chr1	3576190	.	AAACAAACAAAC	.	.	.	END=3576201;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:35,14,0,0:3,35:NULL:265.705:326.675,113.385:0.0,0.0:0.0,2.63675e-10,1.0
-chr1	3576505	.	TAGTAGTAGTAGTAGTAGTAGTAGTAG	.	.	.	END=3576531;RU=tag;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:9,9:9-9,9-9:20,8,0,3:9,20:7,2|8,1:176.424:326.675,113.385:0.139319,0.139319:1.07664e-33,4.93298e-06,0.999995
-chr1	3576606	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=3576674;RU=aga;PERIOD=3;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.984391:23,24:22-25,23-25:8,12,0,8:23,4|24,4:4,1|10,1|13,1|14,1|15,2|16,1|21,1:207.178:326.675,113.385:0.691512,0.390054:2.67454e-12,0.000776178,0.999226
-chr1	3577214	.	CAATCAATCAAT	.	.	.	END=3577225;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:157.478:326.675,113.385:0.0,0.0:0.0,1.38944e-06,1.0
-chr1	3581254	.	CAAACAAACAAACAAACAAA	.	.	.	END=3581273;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99584:5,5:5-5,5-5:11,7,0,5:5,11:3,3|4,2:146.225:326.675,113.385:0.0,0.0:2.42381e-38,0.00168218,0.998322
-chr1	3585710	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3585763;RU=ac;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.294279:27,30:25-27,24-30:6,8,0,15:25,2|27,4:5,1|6,1|11,2|12,1|17,1|19,1|20,2|22,1|23,1|24,2|25,1|30,1:227.254:326.675,113.385:0.839893,2.50693:2.65437e-10,0.000150105,0.99985
-chr1	3588411	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3588450;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.545097:19,20:18-20,18-20:14,18,0,15:18,3|19,3|20,8:5,1|6,1|7,1|9,1|11,1|13,2|14,3|16,1|17,3|18,1:355.199:326.675,113.385:0.840593,0.339533:7.22038e-07,0.88835,0.111751
-chr1	3589857	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=3589900;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.776566:22,22:20-22,20-22:10,10,0,14:21,3|22,7:10,4|12,1|13,1|14,2|15,2|19,3|22,1:252.111:326.675,113.385:0.669325,0.669325:8.57183e-15,0.206472,0.793575
-chr1	3590265	.	ATATATATATATAT	.	.	.	END=3590278;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:7,7:7-7,7-7:19,12,0,0:7,19:NULL:186.993:326.675,113.385:0.0990099,0.0990099:1.38016e-34,2.74559e-05,0.999972
-chr1	3593993	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3594042;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.31823:25,34:24-25,13-34:9,16,0,17:23,2|24,2|25,5:6,2|8,2|9,1|10,1|11,1|17,2|18,1|19,3|24,3|33,1:340.608:326.675,113.385:0.469854,9.1742:2.0047e-08,0.00153837,0.998466
-chr1	3594304	.	TTTGTTTTGTTTTGT	.	.	.	END=3594318;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.331:326.675,113.385:0.0,0.0:0.0,1.13909e-05,0.999988
-chr1	3595528	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=3595547;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:3,2|4,4|5,1:263.14:326.675,113.385:0.0,0.0:0.0,2.20549e-07,1.0
-chr1	3597713	.	CCACCCACCCAC	.	.	.	END=3597724;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:33,25,0,3:3,33:2,3:380.699:326.675,113.385:0.0,0.0:0.0,3.59453e-10,1.0
-chr1	3598374	.	AGAGAGAGAGAGAG	.	.	.	END=3598387;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:7,7:6-7,6-7:19,10,0,2:7,19:4,1|6,1:177.761:326.675,113.385:0.21692,0.21692:0.0,1.1847e-05,0.999987
-chr1	3599536	.	ATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATAT	.	.	END=3599577;RU=at;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.155543:20,20:20-22,20-22:2,4,0,0:20,2:NULL:50.4491:326.675,113.385:0.906252,0.906252:0.466256,0.47373,0.060177
-chr1	3599896	.	AAACAAACAAAC	.	.	.	END=3599907;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,4:3,21:2,3|3,1:241.059:326.675,113.385:0.0,0.0:0.0,5.51798e-07,1.0
-chr1	3600086	.	ACAAACAAACAAACAAACAA	.	.	.	END=3600105;RU=acaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:28,17,0,3:5,28:4,3:294.706:326.675,113.385:0.0,0.0:0.0,9.54704e-09,1.0
-chr1	3608018	.	TTGTTTGTTTGT	.	.	.	END=3608029;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,7,0,0:3,36:NULL:206.438:326.675,113.385:0.0,0.0:0.0,1.14619e-10,1.0
-chr1	3608156	.	TTTGTTTGTTTGTTTG	.	.	.	END=3608171;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,16,0,6:4,25:3,6:283.617:326.675,113.385:0.0,0.0:0.0,9.75639e-08,1.0
-chr1	3610003	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=3610046;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999485:22,22:22-22,22-22:16,16,0,19:22,16:5,1|6,1|8,1|9,2|10,1|11,2|12,1|13,1|15,1|16,2|17,2|19,2|21,1|22,1:373.435:326.675,113.385:0.0,0.0:9.25308e-26,9.79314e-05,0.999903
-chr1	3612774	.	AAAGAAAGAAAGAAAG	.	.	.	END=3612789;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,19,0,4:4,26:3,4:315.785:326.675,113.385:0.0,0.0:0.0,7.2981e-08,1.0
-chr1	3613442	.	CTGCTGCTGCTG	.	.	.	END=3613453;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:37,17,0,0:4,37:NULL:294.658:326.675,113.385:0.0,0.0:0.0,9.79091e-11,1.0
-chr1	3630160	.	AATTAATTAATT	.	.	.	END=3630171;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:109.798:326.675,113.385:0.0,0.0:0.0,8.58725e-06,0.999994
-chr1	3631051	.	ATTAATTAATTA	.	.	.	END=3631062;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.256:326.675,113.385:0.0,0.0:0.0,5.80739e-07,1.0
-chr1	3638662	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=3638693;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:24,26,0,15:8,24:2,2|3,1|4,3|5,2|6,1|7,6:454.389:326.675,113.385:0.0,0.0:0.0,3.53291e-07,1.0
-chr1	3639042	.	AAGAAAGAAAGA	.	.	.	END=3639053;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:48,15,0,0:3,48:NULL:321.101:326.675,113.385:0.0,0.0:0.0,1.76623e-14,1.0
-chr1	3649526	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3649573;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.862321:24,24:23-24,23-24:7,9,0,12:24,7:5,1|6,1|8,1|9,1|10,1|12,1|14,1|15,1|19,3|21,1:206.345:326.675,113.385:0.253975,0.253975:3.65728e-09,0.0713484,0.928746
-chr1	3650739	.	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3650782;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.808444:22,22:19-22,19-22:17,13,0,28:21,5|22,12:4,2|5,1|7,1|8,5|9,2|10,3|13,2|14,1|16,2|17,1|18,2|19,1|20,1|21,3|22,1:426.994:326.675,113.385:0.695329,0.695329:1.83475e-18,0.191368,0.808688
-chr1	3651177	.	AAGGAAGGAAGG	.	.	.	END=3651188;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.048:326.675,113.385:0.0,0.0:0.0,7.46354e-08,1.0
-chr1	3652162	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3652195;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.752574:17,17:16-17,16-17:11,9,0,3:16,3|17,8:9,2|15,1:160.628:326.675,113.385:0.412766,0.412766:1.17992e-08,0.24142,0.758596
-chr1	3652198	.	ATGTATGTATGT	.	.	.	END=3652209;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999242:3,3:3-3,3-3:14,7,0,0:3,14:NULL:121.301:326.675,113.385:0.0,0.0:1.08e-42,0.000431677,0.999569
-chr1	3652267	.	ATTTATTTATTT	.	.	.	END=3652278;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999819:3,3:3-3,3-3:16,8,0,0:3,16:NULL:137.147:326.675,113.385:0.0,0.0:0.0,0.000102968,0.999896
-chr1	3653461	.	GTGGGTGGGTGG	.	.	.	END=3653472;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999931:3,3:3-3,3-3:17,8,0,0:3,17:NULL:136.47:326.675,113.385:0.0,0.0:0.0,3.93278e-05,0.999963
-chr1	3655005	.	ATAAATAAATAAATAAATAAATAA	.	.	.	END=3655028;RU=ataa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999:6,6:6-6,6-6:13,7,0,2:6,13:5,2:129.011:326.675,113.385:0.0,0.0:8.21165e-40,0.000428176,0.999575
-chr1	3658217	.	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3658262;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.928376:23,23:21-24,21-24:11,8,0,14:22,2|23,9:5,1|8,1|10,2|14,2|16,1|19,2|20,2|22,3:236.441:326.675,113.385:0.507951,0.507951:9.4495e-09,0.0600128,0.940076
-chr1	3658997	.	TAAAATAAAATAAAA	.	.	.	END=3659011;RU=taaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993071:3,3:3-3,3-3:10,19,0,2:3,10:2,2:238.715:326.675,113.385:0.0,0.0:7.02703e-33,0.00430459,0.995704
-chr1	3659687	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3659732;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.973781:23,23:14-23,14-23:10,17,0,20:23,10:4,1|5,1|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,2|18,1|20,1|21,1:361.452:326.675,113.385:4.1361,4.1361:2.24582e-11,0.0119948,0.988032
-chr1	3660735	.	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=3660759;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,7,0,5:5,23:3,1|4,4:194.246:326.675,113.385:0.0,0.0:0.0,3.25399e-07,1.0
-chr1	3661144	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=3661161;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:20,11,0,4:9,20:5,1|6,1|8,1|9,1:215.734:326.675,113.385:0.0,0.0:1.8807e-38,4.27597e-06,0.999995
-chr1	3667713	.	AACAAACAAACA	.	.	.	END=3667724;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:192.588:326.675,113.385:0.0,0.0:0.0,4.54549e-06,0.999995
-chr1	3671145	.	GCAGCAGCAGCAGCA	.	.	.	END=3671159;RU=gca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:21,18,0,2:5,21:3,1|4,1:268.021:326.675,113.385:0.0,0.0:0.0,4.46015e-06,0.999995
-chr1	3671658	.	GCCGCCGCCGCCGCC	.	.	.	END=3671672;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:45,33,0,2:5,45:4,2:511.722:326.675,113.385:0.0,0.0:0.0,2.72444e-13,1.0
-chr1	3672852	.	CACCACCACCAC	.	.	.	END=3672863;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.242123:4,4:1-4,1-4:2,4,0,0:4,2:NULL:41.7069:326.675,113.385:0.857222,0.857222:4.36802e-06,0.405199,0.59487
-chr1	3673065	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	.	END=3673124;RU=cttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.66215:15,15:13-15,13-15:5,10,0,5:15,5:3,1|5,1|7,1|10,1|13,1:152.866:326.675,113.385:0.404368,0.404368:4.1154e-10,0.210486,0.789562
-chr1	3673125	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3673174;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0214122:24,24:23-26,23-26:0,10,0,6:NULL:5,1|6,1|12,1|16,1|21,1|24,1:143.116:326.675,113.385:1.0234,1.0234:0.120437,0.554704,0.325002
-chr1	3677305	.	AGAGAGAGAGAG	.	.	.	END=3677316;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,10,0,2:6,24:5,2:207.0:326.675,113.385:0.0,0.0:0.0,1.97072e-07,1.0
-chr1	3679100	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=3679119;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,7,0,3:5,26:4,3:191.379:326.675,113.385:0.0,0.0:0.0,4.85084e-08,1.0
-chr1	3680409	.	TTTTGTTTTGTTTTG	.	.	.	END=3680423;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:227.682:326.675,113.385:0.0,0.0:0.0,2.28936e-07,1.0
-chr1	3681094	.	TCTATCTATCTA	.	.	.	END=3681105;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,13,0,3:3,32:2,3:264.039:326.675,113.385:0.0,0.0:0.0,8.76106e-10,1.0
-chr1	3686501	.	TATATATATATATATATATATATATATATATATATATA	.	.	.	END=3686538;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.782299:19,19:19-19,19-19:6,7,0,0:19,6:NULL:88.745:326.675,113.385:0.417958,0.417958:3.40388e-08,0.123674,0.876425
-chr1	3688514	.	AAACAAACAAACAAAC	.	.	.	END=3688529;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999821:4,4:4-4,4-4:17,12,0,0:4,17:NULL:183.456:326.675,113.385:0.0,0.0:0.0,0.00014699,0.999856
-chr1	3689585	.	GTGGGTGGGTGGGTGG	.	.	.	END=3689600;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980853:4,4:4-4,4-4:9,28,0,3:4,9:3,3:307.763:326.675,113.385:0.0,0.0:1.30993e-24,0.0128877,0.987141
-chr1	3693848	.	TCTCTGTCTCTGTCTCTG	.	.	.	END=3693865;RU=tctctg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:201.695:326.675,113.385:0.0,0.0:0.0,1.96197e-06,1.0
-chr1	3693870	.	TGTGTGTGTGTGTG	.	.	.	END=3693883;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999913:7,7:7-8,7-8:17,8,0,3:7,17:6,3:159.633:326.675,113.385:0.261581,0.261581:1.32769e-31,2.84845e-05,0.999972
-chr1	3695906	.	TTTTATTTTATTTTA	.	.	.	END=3695920;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999485:3,3:3-3,3-3:14,12,0,2:3,14:2,2:185.671:326.675,113.385:0.0,0.0:1.2918e-40,0.000265004,0.999736
-chr1	3699904	.	CTTTCTTTCTTT	.	.	.	END=3699915;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:175.035:326.675,113.385:0.0,0.0:0.0,3.71979e-07,1.0
-chr1	3700824	.	CATCATCATCAT	.	.	.	END=3700835;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:47,15,0,4:4,47:3,4:350.769:326.675,113.385:0.0,0.0:0.0,3.01842e-14,1.0
-chr1	3702280	.	AAATAAATAAAT	.	.	.	END=3702291;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.624:326.675,113.385:0.0,0.0:0.0,2.31843e-06,1.0
-chr1	3702293	.	AAATAAAATAAAATA	.	.	.	END=3702307;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:143.124:326.675,113.385:0.0,0.0:0.0,9.21183e-06,0.999993
-chr1	3708462	.	GAGAGAGAGAGAGA	.	.	.	END=3708475;RU=ga;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999898:7,7:7-7,7-7:17,7,0,3:7,17:4,1|5,1|6,1:157.139:326.675,113.385:0.0990099,0.0990099:1.44551e-31,3.82113e-05,0.999963
-chr1	3712175	.	ACACACACACACACACACACACACACAC	.	.	.	END=3712202;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.866293:14,14:13-16,13-16:15,14,0,7:13,3|14,12:6,1|7,1|9,2|10,1|12,1|13,1:256.427:326.675,113.385:0.696456,0.696456:1.35313e-13,0.133089,0.867002
-chr1	3712203	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=3712260;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.954639:29,29:24-30,24-30:11,12,0,14:28,2|29,9:5,1|6,1|7,1|13,1|14,1|15,1|16,1|18,1|19,1|20,2|21,1|24,1|29,1:276.241:326.675,113.385:1.67885,1.67885:5.44121e-18,0.0265952,0.973455
-chr1	3719601	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3719644;RU=ag;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.465736:22,25:21-22,20-25:16,11,0,11:20,5|21,3|22,8:7,1|10,2|14,2|15,2|20,1|21,1|24,1|25,1:285.322:326.675,113.385:0.358902,1.23703:2.13583e-17,1.41103e-05,0.999987
-chr1	3719848	.	CCAGCCAGCCAG	.	.	.	END=3719859;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:288.791:326.675,113.385:0.0,0.0:0.0,1.16681e-07,1.0
-chr1	3720011	.	GTGGTGGTGGTG	.	.	.	END=3720022;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,12,0,0:4,35:NULL:254.334:326.675,113.385:0.0,0.0:0.0,2.74008e-10,1.0
-chr1	3722193	.	CACCACCACCAC	.	.	.	END=3722204;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:4,4:4-4,4-4:20,16,0,0:4,20:NULL:226.869:326.675,113.385:0.0,0.0:0.0,1.35846e-05,0.999987
-chr1	3724786	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3724835;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.88837:25,27:13-26,13-27:13,28,0,22:23,2|25,8|26,3:5,1|7,3|9,1|12,2|13,2|14,1|15,2|16,1|19,2|20,1|22,1|23,1|24,3|27,1:510.895:326.675,113.385:3.432,4.39533:6.1595e-17,1.69852e-07,1.0
-chr1	3724835	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=3724868;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:17,17:8-17,8-17:27,26,0,15:17,27:4,2|5,2|7,1|8,4|9,1|13,1|14,3|15,1:469.515:326.675,113.385:2.68881,2.68881:0.0,8.94391e-08,1.0
-chr1	3726870	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	.	END=3726905;RU=cttc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.670658:9,9:9-9,9-9:5,13,0,3:9,5:3,1|6,2:160.314:326.675,113.385:0.19802,0.19802:7.56913e-10,0.260988,0.739012
-chr1	3727052	.	CCACCCACCCAC	.	.	.	END=3727063;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,9,0,4:3,31:2,3|3,1:231.54:326.675,113.385:0.0,0.0:0.0,5.74388e-10,1.0
-chr1	3727955	.	CACACACACACA	CACACA	.	.	END=3727966;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.323451:3,6:3-6,3-6:2,27,0,0:6,2:NULL:249.758:326.675,113.385:1.38061,1.03663:9.28477e-05,0.665603,0.334317
-chr1	3730566	.	ATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3730609;RU=at;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.167736:21,21:17-21,17-21:2,8,0,0:21,2:NULL:84.4048:326.675,113.385:1.1439,1.1439:0.620722,0.34227,0.0370962
-chr1	3730917	.	AAAATAAAATAAAAT	.	.	.	END=3730931;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,6,0,0:3,18:NULL:128.579:326.675,113.385:0.0,0.0:0.0,1.8288e-05,0.999985
-chr1	3732771	.	ACAAACAAACAAACAA	.	.	.	END=3732786;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:37,12,0,3:4,37:3,3:281.16:326.675,113.385:0.0,0.0:0.0,2.69868e-11,1.0
-chr1	3733827	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=3733846;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:20,18,0,4:5,20:3,1|4,3:274.694:326.675,113.385:0.0,0.0:0.0,4.27277e-06,0.999995
-chr1	3733847	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3733864;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:221.582:326.675,113.385:0.0,0.0:0.0,4.92952e-06,0.999995
-chr1	3742835	.	ACATACATACAT	.	.	.	END=3742846;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999756:3,3:3-3,3-3:15,6,0,2:3,15:2,2:128.457:326.675,113.385:0.0,0.0:0.0,0.000104244,0.999896
-chr1	3744407	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=3744462;RU=ggaa;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994739:14,14:14-14,14-14:11,13,0,11:14,11:3,1|4,2|5,1|7,2|8,2|11,1|12,2:247.076:326.675,113.385:0.0,0.0:3.08675e-25,0.00330763,0.996701
-chr1	3745050	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=3745103;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.811515:27,27:23-27,23-27:6,13,0,7:27,6:11,1|17,2|19,1|23,1|26,2:200.791:326.675,113.385:1.59366,1.59366:2.83126e-07,0.0964777,0.903624
-chr1	3752086	.	GTGTGTGTGTGT	.	.	.	END=3752097;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,15,0,2:6,21:5,2:235.47:326.675,113.385:0.139319,0.139319:0.0,2.68487e-06,1.0
-chr1	3758404	.	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	.	.	.	END=3758448;RU=aaaca;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99793:9,9:9-9,9-9:12,9,0,7:9,12:5,3|7,1|8,3:176.998:326.675,113.385:0.0,0.0:2.98334e-31,0.00078847,0.999217
-chr1	3765019	.	ATTTATTTATTT	.	.	.	END=3765030;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999971:3,3:3-3,3-3:18,10,0,0:3,18:NULL:156.196:326.675,113.385:0.0,0.0:0.0,2.37635e-05,0.999979
-chr1	3766121	.	ACCCACCCACCC	.	.	.	END=3766132;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981572:3,3:3-3,3-3:9,21,0,0:3,9:NULL:219.913:326.675,113.385:0.0,0.0:9.73776e-28,0.0135567,0.986474
-chr1	3774612	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3774657;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.766394:23,24:21-23,17-25:16,13,0,19:21,2|22,3|23,11:5,2|8,1|9,3|11,3|13,1|14,5|21,1|22,1|23,1|24,1:364.47:326.675,113.385:0.893506,2.31438:9.02236e-21,4.32181e-05,0.999957
-chr1	3779502	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3779519;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996225:3,3:3-3,3-3:11,10,0,2:3,11:2,2:146.011:326.675,113.385:0.0,0.0:4.10704e-36,0.00189986,0.998108
-chr1	3784264	.	TTTATTTATTTA	.	.	.	END=3784275;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:196.026:326.675,113.385:0.0,0.0:0.0,4.68302e-07,1.0
-chr1	3785257	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3785292;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999161:18,18:18-18,18-18:16,9,0,7:18,16:6,2|10,1|11,2|13,1|16,1:210.872:326.675,113.385:0.0,0.0:1.9113e-20,0.000261504,0.999742
-chr1	3786174	.	TTTATTTATTTA	.	.	.	END=3786185;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:3,3:3-3,3-3:17,9,0,0:3,17:NULL:151.107:326.675,113.385:0.0,0.0:0.0,6.01705e-05,0.999941
-chr1	3786490	.	TAAATAAATAAA	.	.	.	END=3786501;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:185.487:326.675,113.385:0.0,0.0:0.0,1.83393e-08,1.0
-chr1	3788152	.	CATACATACATA	.	.	.	END=3788163;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:18,10,0,5:3,18:2,5:200.301:326.675,113.385:0.0,0.0:0.0,1.22226e-05,0.999987
-chr1	3788588	.	CTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCC	.	.	.	END=3788627;RU=ctctctcc;PERIOD=8;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.887773:5,5:5-5,5-5:6,9,0,3:5,6:2,1|4,2:124.338:326.675,113.385:0.29703,0.29703:5.95352e-18,0.0705128,0.929582
-chr1	3789797	.	AATAAATAAATA	.	.	.	END=3789808;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999822:3,3:3-3,3-3:16,5,0,0:3,16:NULL:110.646:326.675,113.385:0.0,0.0:0.0,9.87633e-05,0.999903
-chr1	3805050	.	TTGGTTGGTTGG	.	.	.	END=3805061;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:231.613:326.675,113.385:0.0,0.0:0.0,7.69771e-08,1.0
-chr1	3805151	.	CTGCCTCTGCCTCTGCCTCTGCCT	.	.	.	END=3805174;RU=ctgcct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,12,0,3:4,25:3,3:229.306:326.675,113.385:0.0,0.0:0.0,1.29196e-07,1.0
-chr1	3805421	.	ACCCACCCACCC	.	.	.	END=3805432;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.933602:3,3:3-3,3-3:7,10,0,0:3,7:NULL:114.943:326.675,113.385:0.0,0.0:2.59369e-20,0.0362776,0.96379
-chr1	3808366	.	TTGTTTGTTTGT	.	.	.	END=3808377;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:166.117:326.675,113.385:0.0,0.0:0.0,5.45415e-06,0.999995
-chr1	3820046	.	ATACATACATAC	.	.	.	END=3820057;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998942:3,3:3-3,3-3:13,5,0,2:3,13:2,2:109.567:326.675,113.385:0.0,0.0:1.1e-44,0.000421401,0.999583
-chr1	3820489	.	GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	.	.	.	END=3820553;RU=gaaga;PERIOD=5;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.495419:13,13:11-13,11-13:3,13,0,4:13,3:6,1|11,2|12,1:162.65:326.675,113.385:0.634282,0.634282:1.54106e-06,0.353491,0.646549
-chr1	3821324	.	ATGAAATGAAATGAA	.	.	.	END=3821338;RU=atgaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:162.026:326.675,113.385:0.0,0.0:0.0,2.89903e-06,1.0
-chr1	3821877	.	AATAAATAAATA	.	.	.	END=3821888;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,6,0,0:3,18:NULL:123.511:326.675,113.385:0.0,0.0:0.0,2.01864e-05,0.99998
-chr1	3824596	.	GGGTGGGTGGGT	.	.	.	END=3824607;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985127:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.238:326.675,113.385:0.0,0.0:2.41429e-25,0.00757214,0.992446
-chr1	3830973	.	TGGCTGGCTGGC	.	.	.	END=3830984;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,22,0,3:3,38:2,3:370.915:326.675,113.385:0.0,0.0:0.0,1.51153e-11,1.0
-chr1	3835805	.	ACACACACACACACACACACACACAC	.	.	.	END=3835830;RU=ac;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990705:13,13:12-13,12-13:17,19,0,7:12,3|13,14:8,1|9,1|10,2|11,1|12,1|13,1:317.303:326.675,113.385:0.222277,0.222277:4.40569e-26,0.0089973,0.991023
-chr1	3838836	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=3838855;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99562:5,5:5-5,5-5:11,9,0,2:5,11:3,1|4,1:142.612:326.675,113.385:0.0,0.0:2.51935e-32,0.0024653,0.997541
-chr1	3842935	.	GTTTGTTTGTTTGTTT	.	.	.	END=3842950;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998957:4,4:4-4,4-4:13,5,0,3:4,13:2,3:122.152:326.675,113.385:0.0,0.0:1.62355e-39,0.000587118,0.999416
-chr1	3846941	.	ACCCACCCACCC	.	.	.	END=3846952;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98379:3,3:3-3,3-3:9,12,0,0:3,9:NULL:143.689:326.675,113.385:0.0,0.0:3.48521e-27,0.00981038,0.990209
-chr1	3856577	.	CTTGCTTGCTTGCTTGCTTGCTTG	.	.	.	END=3856600;RU=cttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,21,0,6:6,20:4,1|5,5:322.057:326.675,113.385:0.0,0.0:0.0,7.0502e-06,0.999994
-chr1	3858322	.	GGAGGGAGGGAG	.	.	.	END=3858333;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,10,0,2:3,28:2,2:214.309:326.675,113.385:0.0,0.0:0.0,1.39737e-08,1.0
-chr1	3859194	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=3859211;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:6,6:6-6,6-6:18,3,0,2:6,18:4,1|5,1:115.133:326.675,113.385:0.0,0.0:4e-45,1.38367e-05,0.999987
-chr1	3863716	.	AATAACAATAACAATAAC	.	.	.	END=3863733;RU=aataac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,15,0,4:3,21:2,4:248.811:326.675,113.385:0.0,0.0:0.0,2.85121e-06,1.0
-chr1	3869461	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=3869485;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999988:5,5:4-5,4-5:20,17,0,2:5,20:2,2:254.198:326.675,113.385:0.284901,0.284901:0.0,2.21254e-05,0.999979
-chr1	3870192	.	TAAATAAATAAA	.	.	.	END=3870203;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.939518:3,3:3-3,3-3:7,9,0,0:3,7:NULL:111.194:326.675,113.385:0.0,0.0:1.192e-24,0.0342012,0.965862
-chr1	3870234	.	AAAATAAAATAAAAT	.	.	.	END=3870248;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.945741:3,3:3-3,3-3:7,7,0,0:3,7:NULL:91.0854:326.675,113.385:0.0,0.0:1.41804e-21,0.0326951,0.967364
-chr1	3886751	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=3886794;RU=taga;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999928:11,11:11-11,11-11:17,4,0,4:11,17:3,1|5,1|9,1|10,1:141.46:326.675,113.385:0.139319,0.139319:3e-45,3.76311e-05,0.999964
-chr1	3896272	.	ACCCACCCACCC	.	.	.	END=3896283;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997375:3,3:3-3,3-3:12,34,0,0:3,12:NULL:355.046:326.675,113.385:0.0,0.0:1.21639e-35,0.00217,0.997837
-chr1	3898788	.	TAAATAAATAAA	.	.	.	END=3898799;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998845:3,3:3-3,3-3:13,9,0,0:3,13:NULL:137.994:326.675,113.385:0.0,0.0:1.90907e-39,0.000696988,0.999308
-chr1	3898809	.	ATAATAATAATA	.	.	.	END=3898820;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.843641:4,4:3-4,3-4:6,7,0,0:4,6:NULL:91.4475:326.675,113.385:0.497026,0.497026:9.08117e-17,0.0951607,0.904939
-chr1	3902855	.	AAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=3902882;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999965:7,7:7-7,7-7:18,12,0,2:7,18:5,1|6,1:195.079:326.675,113.385:0.0,0.0:0.0,2.76481e-05,0.999972
-chr1	3908575	.	TGTTTTGTTTTGTTT	.	.	.	END=3908589;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:168.466:326.675,113.385:0.0,0.0:0.0,1.73616e-06,1.0
-chr1	3911778	.	ACAGACAGACAG	.	.	.	END=3911789;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,14,0,2:3,19:2,2:218.129:326.675,113.385:0.0,0.0:0.0,1.6093e-05,0.999986
-chr1	3913472	.	CCCCACCCCCACCCCCAC	.	.	.	END=3913489;RU=ccccac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.799407:3,3:1-3,1-3:5,12,0,0:3,5:NULL:130.679:326.675,113.385:0.339533,0.339533:1.86304e-15,0.140504,0.85958
-chr1	3917711	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=3917748;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.682436:19,19:18-19,18-19:10,6,0,7:18,2|19,8:5,1|9,1|11,1|14,1|15,1|18,2:158.387:326.675,113.385:0.452422,0.452422:5.22233e-11,0.308645,0.691365
-chr1	3919065	.	TTTGTTTGTTTG	.	.	.	END=3919076;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:218.523:326.675,113.385:0.0,0.0:0.0,1.10826e-06,1.0
-chr1	3919745	.	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTT	.	.	.	END=3919794;RU=tattt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.940551:10,10:10-10,10-10:7,12,0,12:10,7:4,5|6,4|7,1|8,1|9,1:223.928:326.675,113.385:0.0,0.0:5.12712e-19,0.0354483,0.964613
-chr1	3923978	.	TATATATATATATATA	.	.	.	END=3923993;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998938:8,8:8-8,8-8:14,4,0,0:8,14:NULL:95.9206:326.675,113.385:0.0,0.0:3.50024e-20,0.000529512,0.999476
-chr1	3924698	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	END=3924742;RU=gagag;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.962867:8,8:8-8,8-8:8,8,0,3:8,8:5,1|6,1|7,1:132.604:326.675,113.385:0.0,0.0:0.985408,0.0146238,3.942e-21
-chr1	3924854	.	CTGCTGCTGCTG	.	.	.	END=3924865;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999959:4,4:4-4,4-4:18,11,0,0:4,18:NULL:175.104:326.675,113.385:0.0,0.0:0.0,4.83312e-05,0.999955
-chr1	3925698	.	AGAGAGAGAGAG	.	.	.	END=3925709;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:26,0,0,0:6,26:NULL:102.029:326.675,113.385:0.0,0.0:0.0,9.26147e-08,1.0
-chr1	3929285	.	ACACACACACACACACACACACACACAC	.	.	.	END=3929312;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.19087:14,14:14-16,14-16:24,8,0,7:14,24:7,1|8,2|10,1|11,1|13,1|16,1:245.259:326.675,113.385:0.991682,0.991682:2.33484e-36,7.62607e-08,1.0
-chr1	3932876	.	AAAACAAAACAAAAC	.	.	.	END=3932890;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:136.58:326.675,113.385:0.0,0.0:0.0,8.88413e-06,0.999994
-chr1	3936576	.	AACAAACAAACA	.	.	.	END=3936587;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999654:3,3:3-3,3-3:15,8,0,0:3,15:NULL:130.869:326.675,113.385:0.0,0.0:0.0,0.000206511,0.999796
-chr1	3943923	.	ATATATATATAT	.	.	.	END=3943934;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999959:6,6:6-6,6-6:18,10,0,0:6,18:NULL:165.23:326.675,113.385:0.0,0.0:1.10252e-32,4.65672e-05,0.999956
-chr1	3945858	.	AGAAAGAAAGAA	.	.	.	END=3945869;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99866:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.299:326.675,113.385:0.0,0.0:1.5e-44,0.00084985,0.999156
-chr1	3949566	.	ACACACACACAC	.	.	.	END=3949577;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:6,6:6-6,6-6:19,15,0,0:6,19:NULL:211.802:326.675,113.385:0.139319,0.139319:6e-45,2.42264e-05,0.999978
-chr1	3952215	.	AAACAAACAAACAAAC	.	.	.	END=3952230;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:23,15,0,5:4,23:2,1|3,4:262.927:326.675,113.385:0.169767,0.169767:0.0,5.08034e-07,1.0
-chr1	3952974	.	AGACAGACAGAC	.	.	.	END=3952985;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,4,0,2:3,21:2,2:131.297:326.675,113.385:0.0,0.0:0.0,1.24022e-06,1.0
-chr1	3955861	.	TAAATAAATAAA	.	.	.	END=3955872;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:147.329:326.675,113.385:0.0,0.0:0.0,4.77117e-07,1.0
-chr1	3956922	.	TAATAATAATAA	.	.	.	END=3956933;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,16,0,2:4,31:3,2:286.016:326.675,113.385:0.0,0.0:0.0,2.13785e-09,1.0
-chr1	3960762	.	TGATGATGATGA	.	.	.	END=3960773;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,16,0,3:4,19:3,3:240.278:326.675,113.385:0.0,0.0:0.0,8.06454e-06,0.999994
-chr1	3967310	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3967353;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.71542:21,22:19-23,21-23:8,13,0,10:21,3|22,5:6,1|11,2|12,3|15,1|17,1|18,1|21,1:236.647:326.675,113.385:1.12802,0.516942:0.000163929,0.727214,0.272628
-chr1	3969294	.	CAAACAAACAAACAAA	.	.	.	END=3969309;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995609:4,4:4-4,4-4:12,14,0,0:4,12:NULL:169.889:326.675,113.385:0.0,0.0:6.9e-43,0.00336124,0.996648
-chr1	3972539	.	TTATTTATTTATTTATTTAT	.	.	.	END=3972558;RU=ttat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999802:5,5:5-5,5-5:16,12,0,2:5,16:4,2:188.376:326.675,113.385:0.0,0.0:0.0,0.000120794,0.99988
-chr1	3985823	.	CACACACACACA	.	.	.	END=3985834;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,14,0,5:6,21:4,1|5,4:249.701:326.675,113.385:0.0,0.0:0.0,1.83576e-06,1.0
-chr1	3992697	.	GCAGAGGCAGAGGCAGAG	.	.	.	END=3992714;RU=gcagag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999906:3,3:3-3,3-3:17,11,0,0:3,17:NULL:169.069:326.675,113.385:0.0,0.0:0.0,7.31684e-05,0.999926
-chr1	3996489	.	ACACACACACACACACACACACAC	.	.	.	END=3996512;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999811:12,12:11-12,11-12:16,11,0,9:12,16:7,3|8,3|10,1|11,2:240.974:326.675,113.385:0.169767,0.169767:1.96006e-27,8.2643e-05,0.999918
-chr1	3997264	.	TTATTATTATTA	.	.	.	END=3997275;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979968:4,4:4-4,4-4:9,8,0,0:4,9:NULL:108.54:326.675,113.385:0.0,0.0:1.74558e-27,0.0128414,0.987186
-chr1	3997282	.	TTTATTTATTTA	.	.	.	END=3997293;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999445:3,3:3-3,3-3:14,5,0,0:3,14:NULL:103.056:326.675,113.385:0.0,0.0:0.0,0.00029396,0.999706
-chr1	4000875	.	ATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=4000920;RU=at;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.224362:21,21:18-21,18-21:2,2,0,0:21,2:NULL:27.9122:326.675,113.385:0.650759,0.650759:0.768271,0.231586,0.000171727
-chr1	4008030	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4008077;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.262515:24,41:24-25,24-44:10,11,0,19:23,2|24,6|25,2:4,1|6,1|7,1|11,1|13,1|14,2|16,2|17,1|18,2|19,1|21,1|22,3|23,1|41,1:316.903:326.675,113.385:0.35561,8.37565:7.71648e-11,1.76728e-05,0.999986
-chr1	4008365	.	AAGAAAGAAAGA	.	.	.	END=4008376;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.165:326.675,113.385:0.0,0.0:0.0,2.00184e-05,0.99998
-chr1	4012417	.	AAAGAAAGAAAG	.	.	.	END=4012428;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999853:3,3:3-3,3-3:16,4,0,0:3,16:NULL:98.1249:326.675,113.385:0.0,0.0:0.0,7.07918e-05,0.999933
-chr1	4014539	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4014563;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999961:5,5:5-5,5-5:18,12,0,0:5,18:NULL:178.102:326.675,113.385:0.0,0.0:0.0,4.37563e-05,0.999957
-chr1	4019418	.	TATTTATTTATT	.	.	.	END=4019429;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:183.726:326.675,113.385:0.0,0.0:0.0,9.13158e-06,0.999993
-chr1	4036362	.	CTGGAGCTGGAGCTGGAG	.	.	.	END=4036379;RU=ctggag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:33,23,0,2:3,33:2,1|3,1:350.227:326.675,113.385:0.0,0.0:0.0,3.79735e-10,1.0
-chr1	4039989	.	TTGTTGTTGTTGTTG	.	.	.	END=4040003;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99925:5,5:5-5,5-5:14,4,0,0:5,14:NULL:89.9581:326.675,113.385:0.0,0.0:2.772e-42,0.000409517,0.999591
-chr1	4042319	.	CTTCTTCTTCTT	.	.	.	END=4042330;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:131.321:326.675,113.385:0.0,0.0:0.0,1.48064e-06,1.0
-chr1	4043396	.	AGAAAAGAAAAGAAA	.	.	.	END=4043410;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998571:3,3:3-3,3-3:12,12,0,2:3,12:2,2:163.438:326.675,113.385:0.0,0.0:5.81734e-31,0.000729566,0.999272
-chr1	4043458	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4043521;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0103348:28,28:20-31,20-31:0,2,0,7:NULL:6,1|8,1|12,1|14,1|15,1|24,1|28,1:72.7319:326.675,113.385:5.03241,5.03241:0.48066,0.444317,0.0751495
-chr1	4048648	.	GAGTGAGTGAGT	.	.	.	END=4048659;RU=gagt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:304.176:326.675,113.385:0.0,0.0:0.0,1.0279e-09,1.0
-chr1	4048769	.	AATTAATTAATTAATTAATTAATT	.	.	.	END=4048792;RU=aatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998984:6,6:5-6,5-6:15,18,0,0:6,15:NULL:229.027:326.675,113.385:0.334882,0.334882:1.13576e-37,0.000935996,0.999066
-chr1	4049279	.	AAACAAACAAACAAAC	.	.	.	END=4049294;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,14,0,0:4,26:NULL:233.691:326.675,113.385:0.0,0.0:0.0,2.26657e-07,1.0
-chr1	4055341	.	ATTATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=4055376;RU=att;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:12,12:12-12,12-12:19,12,0,8:12,19:4,2|6,1|7,1|9,1|10,1|11,2:247.211:326.675,113.385:0.0,0.0:6.52832e-30,8.2327e-06,0.999994
-chr1	4056452	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4056505;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.31158:27,27:23-28,23-28:3,21,0,9:27,3:7,1|10,1|16,1|17,2|21,1|23,2|27,1:279.724:326.675,113.385:2.33668,2.33668:7.22297e-12,0.453397,0.546713
-chr1	4060377	.	AAACAAACAAACAAACAAAC	.	.	.	END=4060396;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:5,5:5-5,5-5:18,10,0,3:5,18:3,2|4,1:185.131:326.675,113.385:0.0,0.0:0.0,1.62247e-05,0.999986
-chr1	4063131	.	CACACACACACACA	.	.	.	END=4063144;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:24,14,0,0:7,24:NULL:227.233:326.675,113.385:0.0,0.0:0.0,4.36936e-07,1.0
-chr1	4065627	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4065661;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.954031:5,7:5-7,7-7:13,10,0,8:5,2|7,11:3,2|4,1|5,1|6,4:213.486:326.675,113.385:0.985733,0.0:5.22102e-30,0.954154,0.0459211
-chr1	4065673	.	AAACAAACAAACAAAC	.	.	.	END=4065688;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,6,0,0:4,21:NULL:139.16:326.675,113.385:0.0,0.0:0.0,3.96176e-06,0.999995
-chr1	4069662	.	ATTAATTAATTAATTAATTAATTA	.	.	.	END=4069685;RU=atta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.748805:6,6:6-6,6-6:5,5,0,0:6,5:NULL:66.1588:326.675,113.385:0.0,0.0:4.26125e-15,0.160237,0.839837
-chr1	4070485	.	ATATATATATATAT	.	.	.	END=4070498;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987133:7,7:7-7,7-7:10,4,0,0:7,10:NULL:76.1992:326.675,113.385:0.0,0.0:6.28506e-12,0.00772012,0.992296
-chr1	4070608	.	GTTAGTTAGTTA	.	.	.	END=4070619;RU=gtta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,5,0,2:3,31:2,2:183.313:326.675,113.385:0.0,0.0:0.0,1.47285e-09,1.0
-chr1	4086252	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=4086285;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998783:17,17:14-17,14-17:15,8,0,10:17,15:4,1|7,3|8,1|9,3|11,1|14,1:218.492:326.675,113.385:0.970701,0.970701:2.62421e-20,0.000455687,0.999546
-chr1	4088150	.	GTTTGTTTGTTTGTTTGTTT	.	.	.	END=4088169;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:34,27,0,8:5,34:2,1|4,7:447.005:326.675,113.385:0.0,0.0:0.0,3.86099e-10,1.0
-chr1	4090397	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4090442;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.726241:22,23:21-23,23-23:11,5,0,17:21,2|22,3|23,6:6,2|7,1|8,2|12,2|13,1|14,2|16,1|20,2|21,3|22,1:238.146:326.675,113.385:0.754297,0.314035:7.48832e-05,0.783309,0.216657
-chr1	4091063	.	ACAACAACAACAACA	.	.	.	END=4091077;RU=aca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,14,0,3:5,25:4,3:249.245:326.675,113.385:0.0,0.0:0.0,7.75351e-08,1.0
-chr1	4095201	.	AAGGAAGGAAGG	.	.	.	END=4095212;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999568:3,3:3-3,3-3:14,9,0,0:3,14:NULL:136.301:326.675,113.385:0.0,0.0:0.0,0.000262446,0.999742
-chr1	4095413	.	TTTGTTTGTTTGTTTG	.	.	.	END=4095428;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999912:4,4:4-4,4-4:16,11,0,6:4,16:3,6:204.035:326.675,113.385:0.0,0.0:0.0,3.98243e-05,0.999963
-chr1	4100799	.	ATTTTATTTTATTTTATTTTATTTTATTTT	.	.	.	END=4100828;RU=atttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999887:6,6:6-7,6-7:16,9,0,4:6,16:2,1|4,1|5,2:174.799:326.675,113.385:0.284901,0.284901:1.77483e-39,5.38703e-05,0.999948
-chr1	4101417	.	TGTTGTTGTTGTTGT	.	.	.	END=4101431;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999739:5,5:5-5,5-5:15,5,0,4:5,15:3,2|4,2:132.402:326.675,113.385:0.0,0.0:2.26489e-40,9.25796e-05,0.99991
-chr1	4107366	.	TATATATATATA	.	.	.	END=4107377;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:6,6:6-6,6-6:19,5,0,0:6,19:NULL:125.715:326.675,113.385:0.139319,0.139319:1.95623e-34,1.41815e-05,0.999987
-chr1	4112131	.	GCTGCTGCTGCT	.	.	.	END=4112142;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:102.343:326.675,113.385:0.0,0.0:0.0,1.31815e-05,0.999987
-chr1	4114636	.	CTATCTATCTAT	.	.	.	END=4114647;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,18,0,2:3,27:2,2:283.559:326.675,113.385:0.0,0.0:0.0,3.29652e-08,1.0
-chr1	4116064	.	CTCTCTCTCTCT	.	.	.	END=4116075;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:6,6:5-6,5-6:20,11,0,0:6,20:NULL:178.829:326.675,113.385:0.236383,0.236383:0.0,1.40272e-05,0.999987
-chr1	4119174	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=4119245;RU=aaag;PERIOD=4;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.407903:18,18:15-18,15-18:4,10,0,10:18,4:3,1|4,1|5,1|9,2|10,2|13,2|16,1:184.936:326.675,113.385:1.39643,1.39643:6.16298e-09,0.46418,0.535927
-chr1	4121252	.	TGTCTGTCTGTC	.	.	.	END=4121263;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:347.076:326.675,113.385:0.0,0.0:0.0,5.83131e-09,1.0
-chr1	4122075	.	AAATAAATAAAT	.	.	.	END=4122086;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:181.442:326.675,113.385:0.0,0.0:0.0,3.61167e-07,1.0
-chr1	4122666	.	ATCTATCTATCT	.	.	.	END=4122677;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,4:3,26:2,4:261.757:326.675,113.385:0.0,0.0:0.0,3.76513e-08,1.0
-chr1	4123576	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=4123599;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,13,0,10:6,25:2,1|3,5|4,2|5,2:286.859:326.675,113.385:0.0,0.0:0.0,9.49871e-08,1.0
-chr1	4123957	.	TCTCTCTCTCTCTC	.	.	.	END=4123970;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:27,10,0,0:7,27:NULL:209.815:326.675,113.385:0.0,0.0:9.8278e-36,1.16556e-07,1.0
-chr1	4129715	.	CTTTCTTTCTTT	.	.	.	END=4129726;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,16,0,5:3,20:2,5:263.411:326.675,113.385:0.0,0.0:0.0,3.28561e-06,1.0
-chr1	4129886	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=4129913;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:29,19,0,10:7,29:2,2|3,3|4,1|5,1|6,3:361.213:326.675,113.385:0.0,0.0:0.0,9.64579e-09,1.0
-chr1	4129930	.	TTGTTGTTGTTG	.	.	.	END=4129941;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:33,27,0,2:4,33:3,2:382.399:326.675,113.385:0.0,0.0:0.0,7.35907e-10,1.0
-chr1	4140418	.	TTTGTTTGTTTG	.	.	.	END=4140429;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:204.552:326.675,113.385:0.0,0.0:0.0,8.95016e-06,0.999994
-chr1	4140449	.	TTTGGTTTGGTTTGG	.	.	.	END=4140463;RU=tttgg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999782:3,3:3-3,3-3:15,13,0,0:3,15:NULL:180.456:326.675,113.385:0.0,0.0:0.0,0.000169065,0.999834
-chr1	4142498	.	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	.	.	.	END=4142575;RU=cag;PERIOD=3;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.673074:26,26:25-27,25-27:4,25,0,31:26,4:4,1|5,1|6,1|7,2|8,1|9,3|10,1|11,1|12,1|13,2|14,2|15,1|17,1|18,1|19,1|20,2|21,1|22,3|23,1|24,2|25,2:482.865:326.675,113.385:0.678922,0.678922:1.65866e-07,0.112299,0.887802
-chr1	4144308	.	TTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=4144334;RU=ttg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:28,12,0,8:9,28:3,2|5,1|6,1|7,3|8,1:286.039:326.675,113.385:0.0,0.0:0.0,1.41547e-08,1.0
-chr1	4144510	.	TTGTTTTGTTTTGTTTTGTT	.	.	.	END=4144529;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993702:4,4:4-6,4-6:33,17,0,3:4,33:3,2|6,1:323.727:326.675,113.385:0.81164,0.81164:0.0,9.36676e-10,1.0
-chr1	4148898	.	TTTATTTTATTTTAT	.	.	.	END=4148912;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,13,0,0:3,22:NULL:215.568:326.675,113.385:0.0,0.0:0.0,3.91503e-06,0.999995
-chr1	4153288	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=4153307;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:20,17,0,7:5,20:2,1|3,2|4,4:288.974:326.675,113.385:0.0990099,0.0990099:0.0,3.58766e-06,1.0
-chr1	4163090	.	ATTATTATTATT	.	.	.	END=4163101;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:267.259:326.675,113.385:0.0,0.0:0.0,1.23235e-07,1.0
-chr1	4168643	.	TTTATTTATTTA	.	.	.	END=4168654;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:217.241:326.675,113.385:0.0,0.0:0.0,7.03676e-06,0.999994
-chr1	4173459	.	ATTTATTTATTTATTT	.	.	.	END=4173474;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997971:4,4:4-4,4-4:12,9,0,4:4,12:3,4:159.204:326.675,113.385:0.0,0.0:3.14464e-38,0.000692925,0.99931
-chr1	4185941	.	TTTGTTTGTTTG	.	.	.	END=4185952;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:159.974:326.675,113.385:0.0,0.0:0.0,3.14951e-06,1.0
-chr1	4186148	.	TAAATAAATAAA	.	.	.	END=4186159;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:184.863:326.675,113.385:0.0,0.0:0.0,3.44099e-07,1.0
-chr1	4195196	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4195231;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.512226:18,18:17-18,17-18:16,12,0,16:17,4|18,12:5,3|6,1|7,1|11,3|13,2|14,1|15,2|16,3:312.952:326.675,113.385:0.489674,0.489674:1.30546e-13,0.487717,0.512341
-chr1	4196255	.	TTTGTTTGTTTG	.	.	.	END=4196266;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:263.701:326.675,113.385:0.0,0.0:0.0,8.27065e-09,1.0
-chr1	4199614	.	AATTAATTAATT	.	.	.	END=4199625;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990811:3,3:3-3,3-3:10,6,0,0:3,10:NULL:89.9067:326.675,113.385:0.0,0.0:5.26693e-33,0.00436205,0.99565
-chr1	4201150	.	TAAATAAATAAA	.	.	.	END=4201161;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:164.257:326.675,113.385:0.0,0.0:0.0,7.31605e-08,1.0
-chr1	4201564	.	AAACAAACAAAC	.	.	.	END=4201575;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,17,0,2:3,30:2,2:288.108:326.675,113.385:0.0,0.0:0.0,4.0014e-09,1.0
-chr1	4202537	.	AAATAAATAAAT	.	.	.	END=4202548;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,2:3,23:2,2:186.422:326.675,113.385:0.0,0.0:0.0,3.56569e-07,1.0
-chr1	4208149	.	AACAAACAAACA	.	.	.	END=4208160;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999891:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.852:326.675,113.385:0.0,0.0:0.0,6.16608e-05,0.999941
-chr1	4212306	.	AAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=4212333;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:21,9,0,0:7,21:NULL:169.604:326.675,113.385:0.0,0.0:0.0,4.44128e-06,0.999995
-chr1	4215533	.	ATACATACATACATACATACATACATACATACATAC	.	.	.	END=4215568;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993646:9,9:9-9,9-9:11,13,0,19:9,11:3,3|4,3|5,2|6,3|7,5|8,3:308.544:326.675,113.385:0.0,0.0:2.63742e-21,0.00276035,0.997246
-chr1	4216566	.	TGGGTGGGTGGG	.	.	.	END=4216577;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:41,32,0,0:3,41:NULL:443.123:326.675,113.385:0.0,0.0:0.0,3.03466e-12,1.0
-chr1	4219533	.	ACCCACCCACCC	.	.	.	END=4219544;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961038:3,3:3-3,3-3:8,22,0,0:3,8:NULL:225.816:326.675,113.385:0.0,0.0:2.78787e-23,0.0278937,0.972158
-chr1	4222234	.	TGATGATGATGA	.	.	.	END=4222245;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:20,21,0,4:4,20:3,4:302.025:326.675,113.385:0.0,0.0:0.0,3.68792e-06,1.0
-chr1	4239423	.	AAACAAACAAACAAACAAAC	.	.	.	END=4239442;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,14,0,8:5,22:2,3|3,3|4,2:271.56:326.675,113.385:0.0,0.0:0.0,6.11487e-07,1.0
-chr1	4243137	.	TCTGTCTGTCTG	.	.	.	END=4243148;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,26,0,4:3,29:2,4:378.044:326.675,113.385:0.0,0.0:0.0,7.81909e-09,1.0
-chr1	4243659	.	TTGTTGTTGTTGTTG	.	.	.	END=4243673;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:38,6,0,3:5,38:4,3:224.836:326.675,113.385:0.0990099,0.0990099:0.0,1.20459e-11,1.0
-chr1	4244758	.	AACAACAACAAC	.	.	.	END=4244769;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,15,0,3:4,27:3,3:266.465:326.675,113.385:0.0,0.0:0.0,4.53214e-08,1.0
-chr1	4247940	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4247969;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.301817:15,19:15-15,15-20:20,10,0,17:14,2|15,18:5,2|6,1|7,1|9,1|10,5|11,1|12,1|14,4|19,1:327.643:326.675,113.385:0.0,2.03272:2.09358e-25,5.07357e-06,0.999995
-chr1	4261751	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=4261794;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982188:11,11:11-11,11-11:8,7,0,12:11,8:2,1|3,1|5,3|7,2|8,1|10,2|11,2:184.845:326.675,113.385:0.0,0.0:2.19061e-33,0.00320668,0.9968
-chr1	4269351	.	AAATAAATAAAT	.	.	.	END=4269362;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:40,12,0,2:3,40:2,2:283.617:326.675,113.385:0.0,0.0:0.0,6.96112e-12,1.0
-chr1	4275434	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=4275483;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.855347:25,25:24-26,24-26:13,10,0,22:24,3|25,10:6,2|7,1|8,3|9,1|10,2|14,1|15,1|16,2|17,1|18,1|20,1|21,3|22,2|23,1:332.119:326.675,113.385:0.579017,0.579017:1.34034e-09,0.14187,0.858217
-chr1	4275539	.	ATAATAATAATA	.	.	.	END=4275550;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,7,0,0:4,26:NULL:164.927:326.675,113.385:0.0,0.0:0.0,1.25792e-07,1.0
-chr1	4281780	.	CAAACAAACAAA	.	.	.	END=4281791;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,15,0,0:3,38:NULL:284.782:326.675,113.385:0.0,0.0:0.0,2.32525e-11,1.0
-chr1	4285029	.	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	.	.	END=4285113;RU=gaagg;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.99898:10,17:5-17,17-17:5,9,0,16:10,2|17,3:3,1|4,1|5,1|6,1|10,2|11,1|12,3|13,2|15,3|16,1:234.259:326.675,113.385:3.27335,0.372309:2.04025e-06,1.0,7.76487e-37
-chr1	4285247	.	GGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGG	.	.	.	END=4285300;RU=gggaaaggggaagaaagg;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999955:3,3:3-3,3-3:17,14,0,3:3,17:2,1|3,2:222.686:326.675,113.385:0.0,0.0:4.41303e-37,5.37061e-05,0.999948
-chr1	4285317	.	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	.	.	END=4285436;RU=gaaag;PERIOD=5;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0290068:23,23:10-24,10-24:0,7,0,16:NULL:4,2|5,1|6,2|10,3|11,1|13,1|14,1|15,2|18,1|22,1|23,1:178.687:326.675,113.385:4.1875,4.1875:0.291361,0.614,0.094706
-chr1	4287727	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4287770;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.78164:20,22:20-22,22-22:8,14,0,16:20,3|22,5:5,2|8,2|9,1|10,1|11,3|13,2|16,1|18,3|21,1:296.738:326.675,113.385:0.973726,0.0990099:1.1863e-05,0.889694,0.11039
-chr1	4288691	.	TATATATATATA	.	.	.	END=4288702;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999868:6,6:6-8,6-8:17,2,0,0:6,17:NULL:89.5175:326.675,113.385:0.390054,0.390054:6.16941e-24,6.33034e-05,0.99994
-chr1	4290243	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4290302;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.994339:14,14:13-14,13-14:11,13,0,8:14,11:3,1|5,1|7,1|9,1|11,1|12,2|13,1:230.879:326.675,113.385:0.169767,0.169767:0.99755,0.00245547,3.53208e-13
-chr1	4290307	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4290346;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.727856:20,20:18-20,18-20:5,12,0,11:20,5:7,1|9,3|10,2|12,1|16,1|17,1|19,1|20,1:224.134:326.675,113.385:0.851255,0.851255:1.73201e-15,0.0946413,0.905458
-chr1	4292154	.	TGTGTGTGTGTGTG	.	.	.	END=4292167;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,11,0,0:7,22:NULL:184.467:326.675,113.385:0.139319,0.139319:4.9e-44,2.60359e-06,1.0
-chr1	4293061	.	ATTTATTTATTT	.	.	.	END=4293072;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:118.827:326.675,113.385:0.0,0.0:0.0,2.20646e-06,1.0
-chr1	4297521	.	AAATAAATAAAT	.	.	.	END=4297532;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999683:3,3:3-3,3-3:14,12,0,3:3,14:2,3:188.508:326.675,113.385:0.0,0.0:0.0,0.000159458,0.999842
-chr1	4298525	.	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	.	.	.	END=4298564;RU=aggg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.445983:10,10:8-10,8-10:3,9,0,5:10,3:3,1|6,1|7,1|8,1|9,1:135.037:326.675,113.385:0.963606,0.963606:8.30868e-05,0.335561,0.664371
-chr1	4303708	.	GTTTGTTTGTTT	.	.	.	END=4303719;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:254.878:326.675,113.385:0.0,0.0:0.0,7.89661e-10,1.0
-chr1	4304220	.	CTTCCTTCCTTC	.	.	.	END=4304231;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999578:3,3:2-3,2-3:14,21,0,2:3,14:2,2:262.18:326.675,113.385:0.46122,0.46122:0.0,0.000264883,0.999736
-chr1	4304531	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=4304562;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:8,8:8-8,8-8:22,16,0,9:8,22:3,1|4,1|5,1|6,1|7,5:308.08:326.675,113.385:0.0,0.0:0.0,7.07656e-07,1.0
-chr1	4305067	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4305100;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.728765:17,17:16-19,16-19:5,9,0,10:17,5:7,1|9,1|12,1|13,1|15,4|16,2:182.064:326.675,113.385:1.0865,1.0865:3.43413e-08,0.073556,0.926541
-chr1	4307140	.	AATAAAATAAAATAA	.	.	.	END=4307154;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:138.153:326.675,113.385:0.0,0.0:0.0,2.24604e-06,1.0
-chr1	4307673	.	TTGTTGTTGTTG	.	.	.	END=4307684;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:26,13,0,0:4,26:NULL:228.879:326.675,113.385:0.195027,0.195027:0.0,1.37826e-07,1.0
-chr1	4309252	.	TTTGTTTGTTTGTTTG	.	.	.	END=4309267;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,9,0,5:4,35:2,3|3,2:261.591:326.675,113.385:0.0,0.0:0.0,1.11506e-10,1.0
-chr1	4312047	.	AATAATAATAAT	.	.	.	END=4312058;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999633:4,4:4-4,4-4:15,8,0,0:4,15:NULL:131.449:326.675,113.385:0.0,0.0:0.0,0.000241621,0.999759
-chr1	4315806	.	TTTATTTATTTA	.	.	.	END=4315817;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961691:3,3:3-3,3-3:8,8,0,0:3,8:NULL:104.974:326.675,113.385:0.0,0.0:2.31783e-26,0.0214061,0.978636
-chr1	4318869	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	.	END=4318923;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997389:11,11:11-11,11-11:11,11,0,11:11,11:3,1|5,1|8,1|9,3|10,5:224.136:326.675,113.385:0.0,0.0:3.92039e-33,0.00105901,0.998945
-chr1	4328602	.	GTGGGTGGGTGGGTGG	.	.	.	END=4328617;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,16,0,0:4,22:NULL:233.942:326.675,113.385:0.0,0.0:0.0,4.15676e-06,0.999995
-chr1	4328704	.	ATAAATAAATAA	.	.	.	END=4328715;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:197.266:326.675,113.385:0.0,0.0:0.0,6.85972e-06,0.999994
-chr1	4329272	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=4329291;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999204:4,4:3-4,3-4:13,11,0,4:4,13:3,4:178.448:326.675,113.385:0.40582,0.40582:6.01e-43,0.000413943,0.99959
-chr1	4329605	.	GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	.	.	END=4329684;RU=ggaag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.000317116:17,17:17-17,17-17:0,1,0,0:NULL:NULL:8.30332:326.675,113.385:0.0,0.0:0.0516048,0.397132,0.551422
-chr1	4331004	.	AGAGAGAGAGAGAG	.	.	.	END=4331017;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997633:7,7:7-8,7-8:13,15,0,0:7,13:NULL:187.971:326.675,113.385:0.437216,0.437216:1.60787e-27,0.00151059,0.998496
-chr1	4331408	.	TATTATTATTATTATTAT	.	.	.	END=4331425;RU=tat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99739:6,6:6-6,6-6:12,6,0,2:6,12:3,1|5,1:120.743:326.675,113.385:0.0,0.0:3.27621e-34,0.00136058,0.998642
-chr1	4365108	.	TCTTTCTTTCTT	.	.	.	END=4365119;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,3:3,20:2,3:223.14:326.675,113.385:0.0,0.0:0.0,5.17857e-06,0.999995
-chr1	4367608	.	ACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=4367649;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.95915:21,21:11-21,11-21:14,8,0,16:20,3|21,11:10,1|12,1|13,1|14,1|16,2|17,2|19,5|20,3:271.685:326.675,113.385:4.35711,4.35711:1.72038e-11,0.0372044,0.962863
-chr1	4368385	.	CAAACAAACAAACAAA	.	.	.	END=4368400;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:211.969:326.675,113.385:0.0,0.0:0.0,2.97353e-06,1.0
-chr1	4376870	.	AAATAAAATAAAATA	.	.	.	END=4376884;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930548:3,3:3-3,3-3:7,9,0,0:3,7:NULL:110.478:326.675,113.385:0.19802,0.19802:1.82652e-23,0.0449047,0.955169
-chr1	4380706	.	ATATACTATACATATACTATACATATACTATAC	.	.	.	END=4380738;RU=atatactatac;PERIOD=11;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.922507:3,3:3-3,3-3:7,5,0,0:3,7:NULL:74.7609:326.675,113.385:0.0,0.0:1.98248e-09,0.047239,0.952838
-chr1	4381338	.	CTTTCTTTCTTT	.	.	.	END=4381349;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.07:326.675,113.385:0.0,0.0:0.0,8.56297e-08,1.0
-chr1	4383095	.	AAAATAAAATAAAATAAAAT	.	.	.	END=4383114;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999977:4,4:4-4,4-4:18,4,0,0:4,18:NULL:110.196:326.675,113.385:0.0,0.0:0.0,2.68047e-05,0.999972
-chr1	4388234	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=4388268;RU=ttttg;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99907:7,7:6-7,6-7:13,7,0,10:7,13:2,2|3,3|6,5:184.792:326.675,113.385:0.390807,0.390807:2.42909e-35,0.000341891,0.999659
-chr1	4389924	.	AAACAAACAAAC	.	.	.	END=4389935;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999743:3,3:3-3,3-3:15,11,0,0:3,15:NULL:155.687:326.675,113.385:0.0,0.0:0.0,0.000163545,0.999841
-chr1	4390516	.	GAGAAGAGAGAAGAGAGAAGA	.	.	.	END=4390536;RU=gagaaga;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:223.091:326.675,113.385:0.0,0.0:0.0,1.10314e-07,1.0
-chr1	4391542	.	TAAATAAATAAA	.	.	.	END=4391553;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:223.19:326.675,113.385:0.0,0.0:0.0,5.08592e-07,1.0
-chr1	4391556	.	AACAACAACAAC	.	.	.	END=4391567;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,14,0,4:4,19:3,4:235.756:326.675,113.385:0.0,0.0:0.0,6.8877e-06,0.999994
-chr1	4394196	.	TTTGTTTGTTTGTTTG	.	.	.	END=4394211;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:20,7,0,3:4,20:2,1|3,2:171.045:326.675,113.385:0.0,0.0:0.0,3.13178e-06,1.0
-chr1	4399750	.	GAACAGAACAGAACA	.	.	.	END=4399764;RU=gaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999941:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.316:326.675,113.385:0.0,0.0:0.0,5.14948e-05,0.999949
-chr1	4404415	.	ACCACCACCACCACC	.	.	.	END=4404429;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,11,0,2:5,22:3,1|4,1:204.569:326.675,113.385:0.0,0.0:0.0,1.20117e-06,1.0
-chr1	4413710	.	ATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATAC	.	.	.	END=4413789;RU=atagatac;PERIOD=8;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.93962:10,10:10-10,10-10:7,8,0,16:10,7:2,1|3,2|4,1|5,2|6,2|7,4|8,3|9,1:209.782:326.675,113.385:0.0,0.0:9.99768e-20,0.0315962,0.968463
-chr1	4416214	.	AGACAGACAGAC	.	.	.	END=4416225;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,21,0,3:3,20:2,3:296.935:326.675,113.385:0.0,0.0:0.0,2.77719e-06,1.0
-chr1	4417332	.	CATGCATGCATG	.	.	.	END=4417343;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,8,0,0:3,18:NULL:147.202:326.675,113.385:0.0,0.0:0.0,2.16373e-05,0.999979
-chr1	4423050	.	TAATTTAATTTAATT	.	.	.	END=4423064;RU=taatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981437:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.535:326.675,113.385:0.0,0.0:2.28684e-29,0.00902879,0.990993
-chr1	4423239	.	CACACACACACA	.	.	.	END=4423250;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:23,2,0,4:6,23:5,4:138.927:326.675,113.385:0.0,0.0:0.0,3.36608e-07,1.0
-chr1	4425083	.	CCACCACCACCACCACCA	.	.	.	END=4425100;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:29,20,0,5:6,29:5,5:334.155:326.675,113.385:0.0,0.0:0.0,6.39426e-09,1.0
-chr1	4426093	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4426130;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.283368:19,34:19-19,19-34:15,9,0,10:18,3|19,12:8,1|12,1|13,1|15,1|16,1|18,3|19,1|32,1:249.377:326.675,113.385:0.0,6.86953:1.57146e-22,1.97878e-05,0.99998
-chr1	4426860	.	AAACAAACAAAC	.	.	.	END=4426871;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999963:3,3:3-3,3-3:17,5,0,0:3,17:NULL:118.047:326.675,113.385:0.0,0.0:0.0,3.00444e-05,0.999971
-chr1	4429409	.	CCACCACCACCA	.	.	.	END=4429420;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:29,12,0,0:4,29:NULL:225.644:326.675,113.385:0.139319,0.139319:0.0,2.04925e-08,1.0
-chr1	4429719	.	GTGTGTGTGTGT	.	.	.	END=4429730;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999978:6,6:6-6,6-6:19,6,0,0:6,19:NULL:131.122:326.675,113.385:0.0,0.0:6.31465e-34,1.52283e-05,0.999986
-chr1	4429733	.	GAGAGAGAGAGAGAGAGAGA	.	.	.	END=4429752;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.955031:10,10:10-11,10-11:21,8,0,3:10,18|11,3:5,1|8,1|9,1:192.258:326.675,113.385:0.412766,0.412766:3.22241e-26,5.15855e-06,0.999995
-chr1	4430764	.	ATGAATGAATGAATGAATGAATGAATGAATGA	.	.	.	END=4430795;RU=atga;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:19,6,0,6:8,19:2,1|3,1|7,4:179.494:326.675,113.385:0.0,0.0:0.0,4.54047e-06,0.999995
-chr1	4434303	.	TATATATATATA	.	.	.	END=4434314;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.916793:6,6:5-7,5-7:7,14,0,2:6,7:5,2:175.812:326.675,113.385:0.531343,0.531343:4.91889e-09,0.0459664,0.954107
-chr1	4435269	.	CAATCAATCAAT	.	.	.	END=4435280;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999981:3,3:3-3,3-3:18,12,0,2:3,18:2,2:189.296:326.675,113.385:0.0,0.0:0.0,1.38634e-05,0.999987
-chr1	4448845	.	CTGCCTGCCTGC	.	.	.	END=4448856;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:162.143:326.675,113.385:0.0,0.0:0.0,1.34186e-06,1.0
-chr1	4449017	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	.	END=4449072;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.968477:14,14:11-15,11-15:8,18,0,19:14,8:2,1|3,3|4,1|6,3|7,1|8,2|9,2|10,1|12,2|13,3:341.121:326.675,113.385:1.35177,1.35177:1.51877e-16,0.0150207,0.985009
-chr1	4450115	.	ATATATATATAT	.	.	.	END=4450126;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997716:6,6:5-6,5-6:13,17,0,0:6,13:NULL:201.31:326.675,113.385:0.334882,0.334882:6.22094e-24,0.00170779,0.998299
-chr1	4451210	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4451261;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.887578:26,27:11-27,11-27:10,11,0,22:25,3|26,4|27,3:5,3|6,1|7,1|8,1|9,2|14,1|16,1|19,3|20,2|22,2|23,2|24,3:331.719:326.675,113.385:5.24564,6.06172:5.90559e-07,0.101421,0.898681
-chr1	4451385	.	TTGTTTTGTTTTGTT	.	.	.	END=4451399;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.192:326.675,113.385:0.0,0.0:0.0,1.28186e-05,0.999987
-chr1	4451409	.	TCTGTCTGTCTG	.	.	.	END=4451420;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:233.131:326.675,113.385:0.0,0.0:0.0,1.73914e-07,1.0
-chr1	4453062	.	GGAGGGAGGGAG	.	.	.	END=4453073;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,2:3,21:2,2:214.931:326.675,113.385:0.0,0.0:0.0,1.49998e-06,1.0
-chr1	4454884	.	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	.	.	END=4454995;RU=cctgctg;PERIOD=7;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.999114:14,19:10-16,3-21:10,21,1,24:10,3|14,3|16,4:2,2|3,3|4,1|5,1|6,1|9,1|11,2|12,2|13,1|14,5|15,4|16,1:535.961:326.675,113.385:2.21278,4.46079:0.0,1.0,2.26331e-06
-chr1	4461472	.	GAAGGGAAGGGAAGGGAAGG	.	.	.	END=4461491;RU=gaagg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,13,0,3:4,24:3,3:239.676:326.675,113.385:0.0,0.0:0.0,2.98127e-07,1.0
-chr1	4462221	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4462246;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.646146:13,13:13-17,13-17:27,12,0,8:12,2|13,23|14,2:8,1|9,2|10,2|11,1|12,1|17,1:311.76:326.675,113.385:1.82404,1.82404:2.00885e-34,2.38216e-06,1.0
-chr1	4467043	.	ATAAATAAATAA	.	.	.	END=4467054;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.454:326.675,113.385:0.0,0.0:0.0,1.14046e-05,0.999988
-chr1	4467845	.	TTGTTTGTTTGTTTGT	.	.	.	END=4467860;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99997:4,4:4-4,4-4:18,14,0,0:4,18:NULL:199.375:326.675,113.385:0.0,0.0:0.0,3.81478e-05,0.999964
-chr1	4468187	.	ATCATCATCATC	.	.	.	END=4468198;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,15,0,0:4,22:NULL:227.915:326.675,113.385:0.0,0.0:0.0,3.11186e-06,1.0
-chr1	4469245	.	CACACACACACACACACA	.	.	.	END=4469262;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:9,9:9-9,9-9:21,20,0,5:9,21:5,1|6,1|8,3:310.661:326.675,113.385:0.0,0.0:3.32615e-35,1.90036e-06,1.0
-chr1	4471019	.	AGCCAGCCAGCC	.	.	.	END=4471030;RU=agcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:224.631:326.675,113.385:0.0,0.0:0.0,6.74975e-07,1.0
-chr1	4472443	.	TGTGTGTGTGTGTG	.	.	.	END=4472456;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:23,11,0,4:7,23:5,2|6,2:226.914:326.675,113.385:0.0,0.0:0.0,3.91387e-07,1.0
-chr1	4473588	.	TTTGTTTGTTTG	.	.	.	END=4473599;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,13,0,3:3,29:2,3:253.947:326.675,113.385:0.0,0.0:0.0,6.24976e-09,1.0
-chr1	4475372	.	GTTGGTTGGTTG	.	.	.	END=4475383;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,32,0,2:3,24:2,2:399.093:326.675,113.385:0.0,0.0:0.0,6.3523e-07,1.0
-chr1	4475462	.	TGGTTGGTTGGT	.	.	.	END=4475473;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:294.213:326.675,113.385:0.0,0.0:0.0,5.04333e-06,0.999995
-chr1	4476345	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=4476384;RU=ggaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996083:10,10:10-10,10-10:11,10,0,10:10,11:2,1|5,1|7,2|9,6:209.801:326.675,113.385:0.0,0.0:2.03327e-31,0.0011957,0.998808
-chr1	4476816	.	CCCTCCCTCCCTCCCT	.	.	.	END=4476831;RU=ccct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966917:4,4:4-4,4-4:9,14,0,0:4,9:NULL:168.071:326.675,113.385:0.0,0.0:6.6534e-14,0.0255635,0.974488
-chr1	4477626	.	TAAATAAATAAA	.	.	.	END=4477637;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:197.046:326.675,113.385:0.0,0.0:0.0,1.8844e-08,1.0
-chr1	4490091	.	AACAACAACAACAACAACAAC	.	.	.	END=4490111;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999329:7,7:7-7,7-7:14,8,0,3:7,14:4,1|5,1|6,1:155.084:326.675,113.385:0.0,0.0:4.45758e-38,0.000267166,0.999735
-chr1	4491987	.	TGCTGCTGCTGC	.	.	.	END=4491998;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999976:4,4:4-4,4-4:18,11,0,0:4,18:NULL:174.657:326.675,113.385:0.0,0.0:0.0,3.28594e-05,0.99997
-chr1	4500015	.	ATAATAATAATA	.	.	.	END=4500026;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:226.75:326.675,113.385:0.0,0.0:0.0,2.00146e-06,1.0
-chr1	4500558	.	ACATACATACAT	.	.	.	END=4500569;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99975:3,3:3-3,3-3:15,10,0,0:3,15:NULL:153.146:326.675,113.385:0.0,0.0:3.50738e-38,0.000171094,0.999833
-chr1	4500614	.	AATAAATAAATA	.	.	.	END=4500625;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999519:3,3:3-3,3-3:14,11,0,0:3,14:NULL:157.545:326.675,113.385:0.0,0.0:1.93e-43,0.000309201,0.999691
-chr1	4501653	.	GTAGTAGTAGTAGTA	.	.	.	END=4501667;RU=gta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:5,5:4-5,4-5:19,10,0,2:5,19:4,2:184.127:326.675,113.385:0.195027,0.195027:0.0,1.32039e-05,0.999987
-chr1	4509810	.	TGTGTGTGTGTG	.	.	.	END=4509821;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-9,6-9:100,11,0,2:4,2|6,96|7,2:5,1|7,1:542.75:326.675,113.385:0.771007,0.771007:0.0,3.3599e-26,1.0
-chr1	4510185	.	TATTTATTTATT	.	.	.	END=4510196;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:3,3:3-3,3-3:19,17,0,0:3,19:NULL:222.763:326.675,113.385:0.0,0.0:0.0,1.3827e-05,0.999987
-chr1	4510496	.	GAAGAAGAAGAAGAAGAA	.	.	.	END=4510513;RU=gaa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,9,0,0:6,20:NULL:161.976:326.675,113.385:0.0,0.0:0.0,8.88947e-06,0.999994
-chr1	4510513	.	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	.	.	.	END=4510542;RU=agg;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99965:10,10:10-10,10-10:15,10,0,5:10,15:4,1|6,3|8,1:189.774:326.675,113.385:0.0,0.0:4e-45,0.000222649,0.999781
-chr1	4512324	.	AACAAAACAAAACAA	.	.	.	END=4512338;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998154:3,3:3-4,3-4:12,13,0,2:3,12:2,2:178.278:326.675,113.385:0.484441,0.484441:1.24142e-39,0.00100998,0.998991
-chr1	4514924	.	TTGGTTGGTTGG	.	.	.	END=4514935;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,8,0,2:3,27:2,2:196.928:326.675,113.385:0.0,0.0:0.0,2.16884e-08,1.0
-chr1	4515460	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4515507;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.584003:24,24:16-24,16-24:14,7,0,10:23,5|24,9:9,1|11,2|14,3|18,1|19,1|21,1|22,1:216.042:326.675,113.385:3.21674,3.21674:6.79599e-08,0.413248,0.586829
-chr1	4515925	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=4515960;RU=gttt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:28,19,0,15:9,28:3,2|5,1|6,2|8,10:398.289:326.675,113.385:0.0,0.0:0.0,1.04606e-08,1.0
-chr1	4517194	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4517241;RU=aata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.947807:12,12:12-12,12-12:7,12,0,10:12,7:3,1|4,1|5,1|6,2|11,5:206.508:326.675,113.385:0.0,0.0:4.58471e-16,0.0210618,0.978979
-chr1	4517464	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=4517491;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.846884:14,14:13-15,13-15:16,7,0,13:13,2|14,12|15,2:6,1|7,1|8,3|9,3|10,3|11,1|13,1:242.078:326.675,113.385:0.495247,0.495247:3.39869e-16,0.00271662,0.997291
-chr1	4519236	.	TTTTGTTTTGTTTTG	.	.	.	END=4519250;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:223.843:326.675,113.385:0.0,0.0:0.0,2.45399e-05,0.999978
-chr1	4522379	.	TTTGTTTGTTTG	.	.	.	END=4522390;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995174:3,3:3-3,3-3:11,11,0,0:3,11:NULL:142.451:326.675,113.385:0.0,0.0:1.64583e-36,0.00271403,0.997292
-chr1	4527121	.	TATATATATATATATATA	.	.	.	END=4527138;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.278082:9,9:5-9,5-9:3,1,0,0:9,3:NULL:22.0666:326.675,113.385:1.79052,1.79052:5.24669e-05,0.502426,0.497538
-chr1	4527198	.	ATATATATATATATATATAT	.	.	.	END=4527217;RU=at;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.33062:10,10:9-11,9-11:3,3,0,0:10,3:NULL:39.0087:326.675,113.385:0.741055,0.741055:5.23093e-05,0.359284,0.640709
-chr1	4528748	.	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=4528795;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9829:24,24:24-24,24-24:10,9,0,13:24,10:5,1|7,1|8,1|9,1|16,2|18,1|19,1|21,1|23,4:237.715:326.675,113.385:0.0990099,0.0990099:5.91749e-13,0.0046174,0.995394
-chr1	4529762	.	GGGTGGGTGGGT	.	.	.	END=4529773;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.865018:3,3:3-3,3-3:6,14,0,0:3,6:NULL:151.244:326.675,113.385:0.19802,0.19802:2.29599e-17,0.0763372,0.92376
-chr1	4530947	.	GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	.	.	END=4531030;RU=gagg;PERIOD=4;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0358677:9,9:7-9,7-9:0,0,0,3:NULL:7,1|8,1|9,1:21.8276:326.675,113.385:0.540307,0.540307:1.0,0.0,0.0
-chr1	4533708	.	AAACAAACAAAC	.	.	.	END=4533719;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,8,0,0:3,18:NULL:148.323:326.675,113.385:0.0,0.0:0.0,2.30936e-05,0.999979
-chr1	4536587	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4536616;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99191:15,15:14-16,14-16:22,15,0,8:13,2|14,2|15,16|16,2:5,1|7,2|9,1|11,2|13,1|14,1:313.078:326.675,113.385:0.409188,0.409188:8.50151e-21,0.00223313,0.997775
-chr1	4537486	.	CCCACCCACCCA	.	.	.	END=4537497;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,6,0,0:3,28:NULL:165.859:326.675,113.385:0.0,0.0:0.0,1.44741e-08,1.0
-chr1	4539497	.	AAAACAAAACAAAACAAAAC	.	.	.	END=4539516;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,8,0,4:4,21:2,1|3,3:181.496:326.675,113.385:0.0,0.0:0.0,1.42155e-06,1.0
-chr1	4540447	.	TTTATTTTATTTTAT	.	.	.	END=4540461;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:142.828:326.675,113.385:0.0,0.0:0.0,5.00032e-06,0.999995
-chr1	4542382	.	AAGAAAGAAAGA	.	.	.	END=4542393;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995299:3,3:3-3,3-3:11,5,0,0:3,11:NULL:86.14:326.675,113.385:0.0,0.0:1.94761e-37,0.00231251,0.997693
-chr1	4543194	.	TTATTATTATTA	.	.	.	END=4543205;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999571:4,4:4-4,4-4:15,9,0,0:4,15:NULL:145.931:326.675,113.385:0.0,0.0:3.91876e-40,0.000276912,0.999727
-chr1	4544564	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=4544591;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994105:7,7:7-7,7-7:11,10,0,3:7,11:3,2|6,1:159.312:326.675,113.385:0.0,0.0:7.66103e-37,0.00394,0.996072
-chr1	4545765	.	ACACACACACAC	.	.	.	END=4545776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:33,18,0,3:6,33:4,1|5,2:325.214:326.675,113.385:0.0,0.0:0.0,4.0991e-10,1.0
-chr1	4547787	.	AGGAGGAGGAGG	.	.	.	END=4547798;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,9,0,0:4,28:NULL:190.861:326.675,113.385:0.0,0.0:0.0,3.96374e-08,1.0
-chr1	4556934	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=4556979;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.833758:23,23:21-23,21-23:7,12,0,13:23,7:5,1|6,1|7,1|9,2|10,1|11,1|12,1|13,1|15,1|19,1|20,1|22,1:246.824:326.675,113.385:0.673849,0.673849:9.5259e-08,0.0841745,0.915921
-chr1	4566916	.	GGGTGGGTGGGT	.	.	.	END=4566927;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.760216:3,3:3-3,3-3:5,28,0,0:3,5:NULL:259.804:326.675,113.385:0.0,0.0:1.50785e-13,0.153551,0.846528
-chr1	4567644	.	GTGTGTGTGTGT	.	.	.	END=4567655;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999936:6,6:6-6,6-6:17,8,0,3:6,17:4,1|5,2:171.094:326.675,113.385:0.0,0.0:1.44138e-40,3.13488e-05,0.999971
-chr1	4569841	.	TTGTTTGTTTGT	.	.	.	END=4569852;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:191.967:326.675,113.385:0.0,0.0:0.0,5.36049e-07,1.0
-chr1	4571456	.	AAACAAACAAAC	.	.	.	END=4571467;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:240.533:326.675,113.385:0.0,0.0:0.0,9.15509e-08,1.0
-chr1	4578817	.	ATTGCATTGCATTGC	.	.	.	END=4578831;RU=attgc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:2-3,2-3:23,10,0,2:3,23:2,2:194.365:326.675,113.385:0.323567,0.323567:0.0,5.35587e-07,1.0
-chr1	4579277	.	ACACACACACACACACACACACACACACAC	.	.	.	END=4579306;RU=ac;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980888:15,15:14-16,14-16:19,14,0,9:14,3|15,14|16,2:5,1|6,1|7,2|9,1|12,1|14,3:302.927:326.675,113.385:0.441011,0.441011:1.26407e-17,0.00565926,0.994354
-chr1	4580702	.	ATTTATTTATTT	.	.	.	END=4580713;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.636:326.675,113.385:0.139319,0.139319:0.0,1.64117e-07,1.0
-chr1	4581133	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4581176;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.480372:22,22:21-22,21-22:8,13,0,19:21,3|22,5:5,3|7,1|8,1|9,1|11,1|12,1|13,4|15,1|16,1|18,1|20,2|21,1|22,1:307.642:326.675,113.385:0.492866,0.492866:1.39042e-12,0.48673,0.513336
-chr1	4581630	.	AATTAATTAATT	.	.	.	END=4581641;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.98:326.675,113.385:0.0,0.0:0.0,6.67178e-07,1.0
-chr1	4599798	.	TTTGTTTTGTTTTGT	.	.	.	END=4599812;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:3,3:3-3,3-3:17,19,0,0:3,17:NULL:237.147:326.675,113.385:0.0,0.0:0.0,6.69849e-05,0.999934
-chr1	4602828	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4602885;RU=ct;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.585198:29,29:28-30,28-30:7,10,0,4:28,2|29,5:4,1|5,1|8,1|15,1:162.432:326.675,113.385:0.659736,0.659736:1.82059e-05,0.345316,0.654699
-chr1	4603083	.	CCTCCCCTCCCCTCC	.	.	.	END=4603097;RU=cctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:3,3:3-3,3-3:19,13,0,0:3,19:NULL:188.353:326.675,113.385:0.0,0.0:0.0,1.20483e-05,0.999987
-chr1	4608057	.	GGGTGGGTGGGT	.	.	.	END=4608068;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996315:3,3:3-3,3-3:11,19,0,0:3,11:NULL:212.434:326.675,113.385:0.0,0.0:8.84134e-33,0.00266666,0.997343
-chr1	4612833	.	TATTTATTTATT	.	.	.	END=4612844;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999638:3,3:3-3,3-3:14,14,0,2:3,14:2,2:198.623:326.675,113.385:0.0,0.0:0.0,0.000219158,0.999781
-chr1	4613348	.	AAATAAATAAATAAAT	.	.	.	END=4613363;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:250.85:326.675,113.385:0.0,0.0:0.0,2.46058e-06,1.0
-chr1	4618031	.	CTCTCTCTCTCT	.	.	.	END=4618042;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:34,9,0,3:6,34:4,1|5,2:244.385:326.675,113.385:0.0,0.0:0.0,2.11434e-10,1.0
-chr1	4618737	.	GTTTGTTTGTTTGTTT	.	.	.	END=4618752;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,9,0,0:4,23:NULL:176.817:326.675,113.385:0.0,0.0:0.0,8.71602e-07,1.0
-chr1	4619846	.	ACCACCACCACC	.	.	.	END=4619857;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999638:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.883:326.675,113.385:0.0,0.0:0.0,0.000296661,0.999705
-chr1	4619861	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	.	END=4619904;RU=tcca;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987388:11,11:10-11,10-11:9,19,0,15:11,9:3,2|4,1|5,1|6,1|7,2|8,4|9,2|10,2:319.568:326.675,113.385:0.45695,0.45695:4.95012e-19,0.00840036,0.991621
-chr1	4620573	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=4620612;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.840529:20,20:19-20,19-20:21,24,0,11:19,6|20,15:6,2|9,1|10,1|11,1|12,1|15,2|16,1|19,2:414.162:326.675,113.385:0.382696,0.382696:1.23218e-12,0.15951,0.840564
-chr1	4621359	.	TTTTTTCTTTTTTCTTTTTTC	.	.	.	END=4621379;RU=ttttttc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,21,0,0:3,24:NULL:289.748:326.675,113.385:0.0,0.0:0.0,8.82954e-07,1.0
-chr1	4624755	.	AGGCAGAGGCAGAGGCAGAGGCAG	.	.	.	END=4624778;RU=aggcag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,18,0,5:4,31:3,5:319.943:326.675,113.385:0.0,0.0:0.0,2.05728e-09,1.0
-chr1	4625336	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=4625385;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.745876:25,25:24-25,24-25:6,10,0,8:25,6:11,1|15,1|16,1|17,1|20,1|23,2|24,1:182.304:326.675,113.385:0.21692,0.21692:3.33279e-08,0.0666003,0.933493
-chr1	4626527	.	TTTGTTTGTTTG	.	.	.	END=4626538;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,10,0,2:3,18:2,2:179.203:326.675,113.385:0.0,0.0:0.0,1.23552e-05,0.999987
-chr1	4626573	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=4626592;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999967:4,4:4-4,4-4:18,8,0,0:4,18:NULL:147.753:326.675,113.385:0.0,0.0:0.0,4.01851e-05,0.999963
-chr1	4626799	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4626850;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.678:24,26:23-28,26-28:12,14,0,17:23,3|24,2|25,2|26,5:6,1|7,1|10,1|11,1|12,2|14,1|15,2|16,3|17,1|18,1|22,1|24,2:328.255:326.675,113.385:1.38175,0.586754:0.000234479,0.977781,0.0220282
-chr1	4629230	.	AGAGAGAGAGAGAG	.	.	.	END=4629243;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:40,24,0,2:7,40:4,1|5,1:392.862:326.675,113.385:0.0,0.0:0.0,9.17971e-12,1.0
-chr1	4629974	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4630023;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.776363:24,25:12-25,12-25:9,23,0,10:24,4|25,5:5,1|8,1|9,1|11,1|15,1|16,2|17,1|18,1|21,1:325.245:326.675,113.385:5.93518,6.46133:0.000205716,0.786996,0.212843
-chr1	4631170	.	AAGGACAAAGGACAAAGGACA	.	.	.	END=4631190;RU=aaggaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.712:326.675,113.385:0.0,0.0:0.0,5.48697e-06,0.999995
-chr1	4637541	.	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	.	.	END=4637620;RU=aagag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.666402:15,15:7-15,7-15:4,13,0,19:15,4:4,4|6,3|7,2|8,2|10,1|12,3|13,2|14,2:271.649:326.675,113.385:3.85559,3.85559:0.86852,0.131573,2.53072e-08
-chr1	4637824	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4637855;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.641168:16,16:15-17,15-17:13,13,0,6:15,4|16,9:6,1|9,1|10,2|15,2:236.615:326.675,113.385:0.609213,0.609213:1.13819e-09,0.357257,0.64279
-chr1	4639717	.	ATTTATTTATTTATTT	.	.	.	END=4639732;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,7,0,2:4,25:3,2:184.06:326.675,113.385:0.0,0.0:0.0,1.53537e-07,1.0
-chr1	4642589	.	CTTTCTTTCTTT	.	.	.	END=4642600;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:275.826:326.675,113.385:0.0,0.0:0.0,8.98022e-07,1.0
-chr1	4643335	.	AAGGAAGGAAGG	.	.	.	END=4643346;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,17,0,3:3,29:2,3:290.615:326.675,113.385:0.0,0.0:0.0,9.02746e-09,1.0
-chr1	4648909	.	TTGTTTTGTTTTGTT	.	.	.	END=4648923;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.912248:3,3:3-3,3-3:7,16,0,0:3,7:NULL:178.273:326.675,113.385:0.0,0.0:9.71457e-23,0.070973,0.929121
-chr1	4653049	.	TTTCTTTCTTTC	.	.	.	END=4653060;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999371:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.355:326.675,113.385:0.0,0.0:0.0,0.000334464,0.999667
-chr1	4653751	.	AAAACAAAAACAAAAACA	.	.	.	END=4653768;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,16,0,2:3,18:2,2:230.727:326.675,113.385:0.0,0.0:0.0,1.67796e-05,0.999986
-chr1	4654599	.	GTTGGTTGGTTG	.	.	.	END=4654610;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999943:3,3:3-3,3-3:17,8,0,0:3,17:NULL:139.825:326.675,113.385:0.0,0.0:0.0,3.49385e-05,0.999964
-chr1	4655498	.	TGTGTGTGTGTG	.	.	.	END=4655509;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:6,6:6-6,6-6:19,16,0,0:6,19:NULL:220.995:326.675,113.385:0.0,0.0:2.6249e-41,1.50959e-05,0.999986
-chr1	4661585	.	ACAACAACAACA	.	.	.	END=4661596;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:4,4:4-4,4-4:19,9,0,0:4,19:NULL:163.593:326.675,113.385:0.0,0.0:0.0,1.5113e-05,0.999986
-chr1	4661836	.	GTGGGTGGGTGG	.	.	.	END=4661847;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:189.198:326.675,113.385:0.0,0.0:0.0,3.92993e-07,1.0
-chr1	4663912	.	AATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4663943;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992977:8,8:8-8,8-8:10,6,0,5:8,10:3,1|4,1|5,1|6,1|7,1:132.276:326.675,113.385:0.0,0.0:1.45405e-32,0.0035816,0.996428
-chr1	4664837	.	GTTTGTTTGTTTGTTT	.	.	.	END=4664852;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999068:4,4:2-4,2-4:14,15,0,0:4,14:NULL:192.754:326.675,113.385:0.997595,0.997595:4.60983e-38,0.000776317,0.999226
-chr1	4666307	.	AAACAAACAAACAAACAAAC	.	.	.	END=4666326;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,12,0,5:5,22:2,2|3,1|4,2:233.656:326.675,113.385:0.0,0.0:0.0,8.89071e-07,1.0
-chr1	4666832	.	TAAATAAATAAA	.	.	.	END=4666843;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998541:3,3:3-3,3-3:12,10,0,3:3,12:2,3:161.795:326.675,113.385:0.0,0.0:5.2568e-41,0.00054033,0.999462
-chr1	4675038	.	AAAACAAAACAAAAC	.	.	.	END=4675052;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,14,0,2:3,34:2,2:279.961:326.675,113.385:0.0,0.0:0.0,2.22486e-10,1.0
-chr1	4675154	.	ATAAATAAATAA	.	.	.	END=4675165;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,17,0,0:3,31:NULL:279.737:326.675,113.385:0.0,0.0:0.0,2.42215e-09,1.0
-chr1	4678790	.	AGTGAGTGAGTG	.	.	.	END=4678801;RU=agtg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999849:3,3:3-3,3-3:16,14,0,0:3,16:NULL:198.303:326.675,113.385:0.0,0.0:0.0,0.00010299,0.999896
-chr1	4678965	.	ACAGACAGACAG	.	.	.	END=4678976;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998838:3,3:3-3,3-3:13,9,0,0:3,13:NULL:138.47:326.675,113.385:0.0,0.0:1.0019e-41,0.000656811,0.999347
-chr1	4682367	.	TGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=4682390;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999871:8,8:8-8,8-8:16,4,0,5:8,16:3,1|6,2|7,2:137.885:326.675,113.385:0.0,0.0:4.181e-42,4.04716e-05,0.999963
-chr1	4686168	.	CACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=4686209;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.914242:21,21:20-22,20-22:8,7,0,15:21,8:5,2|6,1|7,1|9,3|10,2|13,1|14,1|15,1|16,1|17,2:218.165:326.675,113.385:0.43744,0.43744:1.32364e-09,0.0367255,0.963338
-chr1	4686524	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	.	.	.	END=4686563;RU=attt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.947364:10,10:10-10,10-10:7,12,0,10:10,7:4,1|5,5|7,1|8,1|9,2:216.363:326.675,113.385:0.0,0.0:6.04772e-18,0.0269432,0.973108
-chr1	4686877	.	CTCTTGCCTCTTGCCTCTTGC	.	.	.	END=4686897;RU=ctcttgc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:171.243:326.675,113.385:0.0,0.0:0.0,1.90551e-05,0.999985
-chr1	4686995	.	CAACCAACCAAC	.	.	.	END=4687006;RU=caac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,7,0,2:3,22:2,2:165.401:326.675,113.385:0.0,0.0:0.0,6.19326e-07,1.0
-chr1	4687079	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=4687118;RU=tttg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999473:10,10:10-10,10-10:14,9,0,8:10,14:3,2|4,1|5,2|6,1|8,1|9,1:196.508:326.675,113.385:0.0,0.0:4.71767e-36,0.000248488,0.999751
-chr1	4689281	.	CCGCCGCCGCCG	.	.	.	END=4689292;RU=ccg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:36,19,0,0:4,36:NULL:318.93:326.675,113.385:0.0,0.0:0.0,2.99631e-10,1.0
-chr1	4689823	.	AAACAAACAAAC	.	.	.	END=4689834;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:157.83:326.675,113.385:0.0,0.0:0.0,3.10126e-06,1.0
-chr1	4697276	.	CACACACACACACACACACACACA	.	.	.	END=4697299;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982059:12,12:11-13,11-13:14,6,0,8:11,2|12,12:4,1|6,1|8,2|9,1|10,2|11,1:184.4:326.675,113.385:0.280742,0.280742:1.87038e-14,0.0171058,0.98293
-chr1	4697462	.	ATTATTATTATT	.	.	.	END=4697473;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,20,0,2:4,31:3,2:325.467:326.675,113.385:0.0,0.0:0.0,2.24018e-09,1.0
-chr1	4698068	.	GGAGGAGGAGGA	.	.	.	END=4698079;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999945:4,4:4-4,4-4:17,6,0,3:4,17:3,3:141.186:326.675,113.385:0.0,0.0:0.0,2.1746e-05,0.999979
-chr1	4699171	.	TTTTGTTTTGTTTTG	.	.	.	END=4699185;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:196.267:326.675,113.385:0.0,0.0:0.0,4.22444e-08,1.0
-chr1	4700769	.	CCTCCTCCTCCT	.	.	.	END=4700780;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:101.437:326.675,113.385:0.0,0.0:0.0,1.29604e-05,0.999987
-chr1	4700784	.	CCACCACCACCA	.	.	.	END=4700795;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999771:4,4:4-4,4-4:15,4,0,3:4,15:3,3:116.705:326.675,113.385:0.0,0.0:7e-45,8.66633e-05,0.999917
-chr1	4702033	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4702088;RU=ac;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.603072:27,28:26-28,26-28:4,17,0,16:27,2|28,2:6,2|10,1|12,1|13,1|14,1|18,1|20,2|21,4|26,2|27,1:299.119:326.675,113.385:0.60323,0.547158:0.0242104,0.693448,0.282391
-chr1	4704115	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4704162;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.730822:23,24:23-24,24-24:8,14,0,10:23,3|24,5:5,2|11,2|15,3|17,1|18,1|23,1:250.512:326.675,113.385:0.498011,0.0990099:0.00034609,0.740631,0.259029
-chr1	4704841	.	TCTTTCTTTCTT	.	.	.	END=4704852;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:259.944:326.675,113.385:0.0,0.0:0.0,1.46928e-07,1.0
-chr1	4706710	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=4706733;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981548:6,6:6-6,6-6:9,4,0,4:6,9:3,2|4,1|5,1:103.685:326.675,113.385:0.0,0.0:8.31345e-23,0.00768594,0.992333
-chr1	4713034	.	ATATATATATAT	.	.	.	END=4713045;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999591:6,6:6-6,6-6:15,7,0,0:6,15:NULL:125.478:326.675,113.385:0.0,0.0:4.14375e-25,0.000265164,0.999736
-chr1	4715718	.	TTGTTGTTGTTG	.	.	.	END=4715729;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,9,0,2:4,19:3,2:175.124:326.675,113.385:0.0,0.0:0.0,8.15183e-06,0.999994
-chr1	4717842	.	TCTTTCTTTCTTTCTT	.	.	.	END=4717857;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:4,4:4-4,4-4:20,21,0,0:4,20:NULL:270.973:326.675,113.385:0.0,0.0:0.0,2.59705e-05,0.999978
-chr1	4718882	.	AACTAACTAACT	.	.	.	END=4718893;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999882:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.664:326.675,113.385:0.0,0.0:0.0,6.8464e-05,0.999933
-chr1	4719899	.	CACACACACACACACACA	.	.	.	END=4719916;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:24,6,0,0:9,24:NULL:154.629:326.675,113.385:0.0990099,0.0990099:9.45833e-37,6.36154e-07,1.0
-chr1	4722124	.	AAACAAACAAACAAAC	.	.	.	END=4722139;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999591:4,4:4-4,4-4:14,10,0,6:4,14:2,3|3,3:188.17:326.675,113.385:0.0,0.0:4.64806e-36,0.000157759,0.999843
-chr1	4725802	.	ACATACATACAT	.	.	.	END=4725813;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,8,0,0:3,27:NULL:182.575:326.675,113.385:0.0,0.0:0.0,4.38532e-08,1.0
-chr1	4726010	.	TTGCTTTGCTTTGCTTTGCTTTGCT	.	.	.	END=4726034;RU=ttgct;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:4-5,4-5:22,9,0,2:5,22:2,1|3,1:187.145:326.675,113.385:0.236383,0.236383:0.0,2.3239e-06,1.0
-chr1	4727699	.	ATAAATAAATAA	.	.	.	END=4727710;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998966:3,3:3-3,3-3:13,14,0,0:3,13:NULL:177.13:326.675,113.385:0.0,0.0:4.2333e-41,0.000612016,0.999392
-chr1	4730651	.	CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	.	.	.	END=4730686;RU=ctc;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9577:12,12:11-12,11-12:8,9,0,3:12,8:8,2|11,1:137.236:326.675,113.385:0.382696,0.382696:2.19064e-17,0.0232822,0.976764
-chr1	4732027	.	CTCTCTCTCTCTCT	.	.	.	END=4732040;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999355:7,7:7-8,7-8:23,12,0,4:7,21|8,2:4,1|5,1|6,2:242.981:326.675,113.385:0.169767,0.169767:1.39357e-38,6.40975e-07,1.0
-chr1	4736939	.	AAATAAATAAATAAAT	.	.	.	END=4736954;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.826804:4,4:4-4,4-4:6,8,0,0:4,6:NULL:94.3292:326.675,113.385:0.0,0.0:3.84179e-18,0.110392,0.889705
-chr1	4744698	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=4744727;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999864:6,6:6-6,6-6:16,9,0,4:6,16:2,1|3,2|5,1:173.344:326.675,113.385:0.0,0.0:0.0,8.61569e-05,0.999917
-chr1	4746881	.	TAGATAGATAGA	.	.	.	END=4746892;RU=taga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99898:3,3:3-3,3-3:13,7,0,0:3,13:NULL:113.283:326.675,113.385:0.0,0.0:1.927e-42,0.000512317,0.999491
-chr1	4749824	.	ATATATATATATATATATATATATATATATATATAT	.	.	.	END=4749859;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.355433:18,18:17-18,17-18:3,3,0,0:18,3:NULL:40.6567:326.675,113.385:0.607117,0.607117:0.00025367,0.373956,0.625845
-chr1	4755604	.	GGAGGGAGGGAGGGAG	.	.	.	END=4755619;RU=ggag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994918:4,4:4-4,4-4:11,2,0,2:4,11:2,2:74.6159:326.675,113.385:0.0,0.0:3.27251e-26,0.00232733,0.997678
-chr1	4755631	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	.	END=4755720;RU=gagag;PERIOD=5;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.204562:18,18:6-18,6-18:2,6,0,12:18,2:3,1|4,3|5,1|6,1|8,2|12,2|13,1|16,1:149.302:326.675,113.385:5.75506,5.75506:0.000265565,0.60808,0.39172
-chr1	4757329	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4757372;RU=ct;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.290199:22,22:18-22,18-22:6,7,0,3:21,2|22,4:5,1|6,1|12,1:120.818:326.675,113.385:1.77374,1.77374:0.00012047,0.657285,0.34262
-chr1	4758257	.	AATAAATAAATA	.	.	.	END=4758268;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992514:3,3:3-3,3-3:10,7,0,2:3,10:2,2:120.596:326.675,113.385:0.0,0.0:2.10875e-29,0.00267692,0.99733
-chr1	4761246	.	TTTGTTTGTTTG	.	.	.	END=4761257;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:129.24:326.675,113.385:0.0,0.0:0.0,2.46117e-06,1.0
-chr1	4765570	.	AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA	AAAGAAAAGAAAAGAAAAGAAAAGA	.	.	END=4765609;RU=aaaga;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.020438:5,5:8-8,8-8:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
-chr1	4767274	.	TTTTGTTTTGTTTTG	.	.	.	END=4767288;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.989:326.675,113.385:0.0,0.0:0.0,1.98159e-06,1.0
-chr1	4769727	.	TTTTTTTGTTTTTTTGTTTTTTTG	.	.	.	END=4769750;RU=tttttttg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.653109:3,3:1-3,1-3:4,3,0,0:3,4:NULL:42.5872:326.675,113.385:0.968882,0.968882:1.43076e-12,0.160707,0.839368
-chr1	4772542	.	AATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4772569;RU=aata;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.955763:7,7:7-7,7-7:7,9,0,7:7,7:3,1|5,2|6,4:162.133:326.675,113.385:0.0,0.0:5.84855e-18,0.0186585,0.981379
-chr1	4777183	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=4777216;RU=tc;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.754583:17,17:16-17,16-17:5,14,0,11:17,5:4,1|5,2|6,1|9,1|10,1|11,1|12,1|14,1|16,2:236.182:326.675,113.385:0.442564,0.442564:3.68037e-08,0.107497,0.892602
-chr1	4778087	.	TGTGTGTGTGTG	.	.	.	END=4778098;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996471:6,6:6-7,6-7:12,18,0,0:6,12:NULL:212.097:326.675,113.385:0.169767,0.169767:7.9323e-14,0.00208419,0.997921
-chr1	4779799	.	TGTGTGTGTGTGTG	.	.	.	END=4779812;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999693:7,7:7-7,7-7:15,1,0,2:7,15:5,1|6,1:84.5827:326.675,113.385:0.0,0.0:1.64184e-29,0.0001191,0.999881
-chr1	4780052	.	GTTTGTTTGTTT	.	.	.	END=4780063;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,7,0,2:3,20:2,2:156.501:326.675,113.385:0.0,0.0:0.0,2.69589e-06,1.0
-chr1	4781290	.	AAAACAAAACAAAACAAAAC	.	.	.	END=4781309;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998513:4,4:4-4,4-4:13,6,0,3:4,13:3,3:130.081:326.675,113.385:0.0,0.0:3.564e-42,0.000659424,0.999346
-chr1	4783247	.	ATATATATATATAT	.	.	.	END=4783260;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.97951:7,7:6-7,6-7:10,5,0,0:7,10:NULL:92.6401:326.675,113.385:0.253975,0.253975:2.75527e-13,0.0112003,0.988822
-chr1	4783908	.	AAAAAACAAAAAACAAAAAAC	.	.	.	END=4783928;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999388:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.87:326.675,113.385:0.0,0.0:0.0,0.00041394,0.99959
-chr1	4789575	.	TGAATGAATGAA	.	.	.	END=4789586;RU=tgaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:3,3:3-3,3-3:18,4,0,0:3,18:NULL:103.76:326.675,113.385:0.0,0.0:0.0,1.71272e-05,0.999986
-chr1	4790408	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=4790503;RU=aag;PERIOD=3;REF=32.0;EXPTHRESH=32	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0217444:31,31:6-32,6-32:0,12,0,13:NULL:6,1|7,2|9,1|12,1|15,1|22,1|28,4|29,1|31,1:211.088:326.675,113.385:11.7012,11.7012:0.153782,0.603073,0.243224
-chr1	4790591	.	AATAATAATAATAATAAT	.	.	.	END=4790608;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999865:6,6:6-6,6-6:16,1,0,2:6,16:4,1|5,1:86.8798:326.675,113.385:0.0,0.0:9.7689e-37,5.64849e-05,0.999947
-chr1	4794293	.	AGACAGACAGACAGACAGAC	.	.	.	END=4794312;RU=agac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999962:5,5:4-5,4-5:17,18,0,10:5,17:2,2|3,2|4,6:306.135:326.675,113.385:0.236383,0.236383:0.0,1.79042e-05,0.999986
-chr1	4795085	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	.	END=4795132;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.808038:12,12:11-12,11-12:6,5,0,6:12,6:4,2|6,1|7,2|9,1:115.137:326.675,113.385:0.486863,0.486863:1.85358e-15,0.117728,0.882373
-chr1	4795238	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=4795257;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999259:4,4:4-4,4-4:14,3,0,0:4,14:NULL:82.904:326.675,113.385:0.0,0.0:0.0,0.000434742,0.999568
-chr1	4796020	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=4796043;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999782:6,6:5-6,5-6:15,24,0,7:6,15:2,1|3,1|4,2|5,3:330.305:326.675,113.385:0.21692,0.21692:3.8787e-40,0.000165203,0.999835
-chr1	4802916	.	TCTCTCTCTCTCTC	.	.	.	END=4802929;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999643:7,7:6-7,6-7:16,14,0,0:7,16:NULL:187.072:326.675,113.385:0.258566,0.258566:1.91725e-19,0.000245916,0.999757
-chr1	4804071	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=4804095;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999989:5,5:5-5,5-5:18,8,0,2:5,18:3,1|4,1:156.963:326.675,113.385:0.0,0.0:0.0,1.81889e-05,0.999985
-chr1	4804879	.	AAAAACAAAAACAAAAAC	.	.	.	END=4804896;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:3,3:3-3,3-3:16,12,0,0:3,16:NULL:173.907:326.675,113.385:0.0,0.0:0.0,0.00012135,0.99988
-chr1	4805189	.	ATTTATTTATTT	.	.	.	END=4805200;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999635:3,3:3-3,3-3:15,9,0,0:3,15:NULL:140.572:326.675,113.385:0.0,0.0:0.0,0.000191892,0.999811
-chr1	4806133	.	TGTGTGTGTGTGTG	.	.	.	END=4806146;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:7,7:7-7,7-7:19,15,0,0:7,19:NULL:214.097:326.675,113.385:0.0,0.0:6.24431e-39,1.63575e-05,0.999986
-chr1	4806257	.	CTGACTGACTGA	.	.	.	END=4806268;RU=ctga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.994:326.675,113.385:0.0,0.0:0.0,2.00295e-05,0.99998
-chr1	4806381	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	.	END=4806412;RU=ttct;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.445733:8,8:6-8,6-8:3,10,0,13:8,3:2,1|3,1|4,1|5,3|6,7:196.493:326.675,113.385:0.390054,0.390054:0.000803766,0.336268,0.662947
-chr1	4808103	.	GCCTGCCTGCCT	.	.	.	END=4808114;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:195.369:326.675,113.385:0.0,0.0:0.0,2.4422e-07,1.0
-chr1	4809703	.	ATGAATGAATGAATGA	.	.	.	END=4809718;RU=atga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99999:4,4:4-4,4-4:18,5,0,2:4,18:2,1|3,1:134.833:326.675,113.385:0.0,0.0:0.0,1.84135e-05,0.999985
-chr1	4809829	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=4809848;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,10,0,0:4,21:NULL:174.053:326.675,113.385:0.0,0.0:0.0,5.23654e-06,0.999995
-chr1	4809864	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4809903;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.997816:20,21:20-20,20-21:17,11,0,14:19,2|20,12|21,3:5,1|7,3|9,1|13,2|14,1|16,1|17,3|19,1|21,1:302.448:326.675,113.385:0.0990099,0.521285:9.21874e-20,2.73005e-07,1.0
-chr1	4810353	.	TTTGTTTGTTTG	.	.	.	END=4810364;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:203.079:326.675,113.385:0.0,0.0:0.0,2.59322e-09,1.0
-chr1	4810746	.	CATGCATGCATG	.	.	.	END=4810757;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.068:326.675,113.385:0.0,0.0:0.0,7.25219e-07,1.0
-chr1	4810950	.	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	.	.	END=4811123;RU=ttctcc;PERIOD=6;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.181505:20,28:4-20,24-33:0,13,7,28:NULL:2,1|3,1|4,1|5,3|6,4|7,3|8,1|12,2|13,1|15,3|16,2|17,3|18,1|19,1|20,1:451.787:326.675,113.385:4.3648,2.33042:0.587313,0.412763,0.0
-chr1	4811609	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=4811650;RU=ga;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999961:21,21:19-21,19-21:25,13,0,9:19,2|20,2|21,21:5,1|8,1|11,2|12,2|16,1|17,1|21,1:310.978:326.675,113.385:0.339533,0.339533:0.0,4.87385e-05,0.999955
-chr1	4811806	.	TTTTGTTTTGTTTTG	.	.	.	END=4811820;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,10,0,4:3,29:2,4:232.858:326.675,113.385:0.0,0.0:0.0,3.1766e-09,1.0
-chr1	4814327	.	AAATAAATAAAT	.	.	.	END=4814338;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998738:3,3:3-3,3-3:13,9,0,0:3,13:NULL:134.801:326.675,113.385:0.0,0.0:6.24e-42,0.000728609,0.999272
-chr1	4815548	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=4815577;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99597:15,15:15-15,15-15:16,12,0,10:14,2|15,14:5,2|6,2|8,1|10,1|11,1|12,1|13,1|14,1:267.548:326.675,113.385:0.0990099,0.0990099:7.71523e-18,0.00342976,0.99658
-chr1	4817565	.	CAGCAGCAGCAG	.	.	.	END=4817576;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:29,17,0,0:4,29:NULL:271.562:326.675,113.385:0.0,0.0:0.0,2.73496e-08,1.0
-chr1	4819449	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=4819472;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999954:6,6:6-8,6-8:16,13,0,8:6,16:2,1|3,1|4,1|5,5:240.238:326.675,113.385:0.797014,0.797014:3e-45,2.72189e-05,0.999972
-chr1	4820555	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4820572;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.351083:9,12:9-9,9-14:31,20,0,10:9,31:4,3|5,3|6,1|7,1|12,2:410.123:326.675,113.385:0.0,1.53456:0.0,1.54242e-14,1.0
-chr1	4822262	.	TGTTTGTTTGTT	.	.	.	END=4822273;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.716:326.675,113.385:0.0,0.0:0.0,6.86054e-07,1.0
-chr1	4822494	.	CACACACACACA	.	.	.	END=4822505;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-7,6-7:23,20,0,7:6,23:4,1|5,5|6,1:327.044:326.675,113.385:0.169767,0.169767:0.0,2.23788e-07,1.0
-chr1	4823989	.	TGTCTGTCTGTCTGTCTGTCTGTC	.	.	.	END=4824012;RU=tgtc;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,12,0,3:6,21:3,1|5,2:217.679:326.675,113.385:0.0,0.0:0.0,1.83163e-06,1.0
-chr1	4831112	.	CTGGCTGGCTGG	.	.	.	END=4831123;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,10,0,0:3,30:NULL:208.27:326.675,113.385:0.0,0.0:0.0,5.0826e-09,1.0
-chr1	4832670	.	CTCCCTCCCTCC	CTCCCTCCCTCCCTCC	.	.	END=4832681;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.359416:3,4:3-3,3-4:23,22,0,3:3,23:2,2|4,1:343.057:326.675,113.385:0.0,0.519212:0.0,5.03971e-08,1.0
-chr1	4835862	.	TTTTGTTTTGTTTTG	.	.	.	END=4835876;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:199.012:326.675,113.385:0.0,0.0:0.0,2.26284e-08,1.0
-chr1	4836013	.	TTTCTTTTCTTTTCT	.	.	.	END=4836027;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:199.94:326.675,113.385:0.0,0.0:0.0,7.37652e-07,1.0
-chr1	4836682	.	TTTATTTATTTA	.	.	.	END=4836693;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,13,0,2:3,18:2,2:204.284:326.675,113.385:0.0,0.0:0.0,1.45272e-05,0.999987
-chr1	4837261	.	TTCATTCATTCATTCATTCA	.	.	.	END=4837280;RU=ttca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99859:5,5:5-5,5-5:13,7,0,0:5,13:NULL:113.046:326.675,113.385:0.0,0.0:8.49476e-37,0.000864304,0.999141
-chr1	4840709	.	AATAAATAAATA	.	.	.	END=4840720;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.951778:3,3:3-3,3-3:8,14,0,0:3,8:NULL:157.058:326.675,113.385:0.0,0.0:1.58998e-26,0.0305701,0.969486
-chr1	4841846	.	AAAGAAAGAAAG	.	.	.	END=4841857;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999869:3,3:3-3,3-3:16,4,0,0:3,16:NULL:102.145:326.675,113.385:0.0,0.0:0.0,6.76053e-05,0.999933
-chr1	4843541	.	TTTGTTTGTTTG	.	.	.	END=4843552;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,4,0,2:3,20:2,2:127.33:326.675,113.385:0.0,0.0:0.0,2.47031e-06,1.0
-chr1	4844779	.	AAAATAAAATAAAAT	.	.	.	END=4844793;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.43:326.675,113.385:0.0,0.0:0.0,2.47012e-06,1.0
-chr1	4845843	.	AAACAAACAAACAAACAAAC	.	.	.	END=4845862;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999957:5,5:5-5,5-5:17,14,0,5:5,17:3,3|4,2:229.622:326.675,113.385:0.0,0.0:0.0,2.45349e-05,0.999978
-chr1	4846452	.	CCAACCAACCAA	.	.	.	END=4846463;RU=ccaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99958:3,3:3-3,3-3:14,5,0,2:3,14:2,2:113.893:326.675,113.385:0.0,0.0:0.0,0.000159645,0.999842
-chr1	4848400	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=4848435;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977879:9,9:8-9,8-9:9,15,0,9:9,9:3,1|5,2|6,2|7,2|8,2:239.873:326.675,113.385:0.437216,0.437216:9.02383e-25,0.011419,0.988606
-chr1	4849030	.	AAAGAAAGAAAGAAAG	.	.	.	END=4849045;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999962:4,4:4-4,4-4:18,12,0,0:4,18:NULL:181.991:326.675,113.385:0.0,0.0:0.0,4.23994e-05,0.999957
-chr1	4849772	.	CAACAACAACAACAACAACAACAACAA	.	.	.	END=4849798;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:20,14,0,3:9,20:4,1|5,1|7,1:234.633:326.675,113.385:0.0990099,0.0990099:0.0,1.02211e-05,0.999993
-chr1	4850587	.	CACACACACACACACACACACACACACACA	.	.	.	END=4850616;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.504365:15,15:12-15,12-15:8,8,0,9:14,2|15,6:9,1|11,2|13,3|14,3:186.57:326.675,113.385:0.877565,0.877565:1.92327e-06,0.477716,0.522377
-chr1	4858043	.	GGGCCGGGCCGGGCCGGGCC	.	.	.	END=4858062;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,11,0,4:4,31:3,4:261.334:326.675,113.385:0.0,0.0:0.0,2.28666e-09,1.0
-chr1	4858328	.	GCTGCTGCTGCT	.	.	.	END=4858339;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,10,0,0:4,30:NULL:212.965:326.675,113.385:0.0,0.0:0.0,7.88224e-09,1.0
-chr1	4859454	.	CAAACAAACAAA	.	.	.	END=4859465;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.96338:3,3:3-3,3-3:8,1,0,0:3,8:NULL:42.1661:326.675,113.385:0.0,0.0:2.92369e-26,0.0150861,0.984943
-chr1	4859713	.	CTCTCTCTCTCTCTCT	.	.	.	END=4859728;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.957459:8,8:8-8,8-8:8,16,0,2:8,8:5,1|7,1:195.057:326.675,113.385:0.0,0.0:8.91426e-16,0.0212945,0.978746
-chr1	4861410	.	TTCTTTCTTTCT	.	.	.	END=4861421;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999288:3,3:3-3,3-3:13,7,0,3:3,13:2,3:138.485:326.675,113.385:0.0,0.0:1.7e-44,0.000239742,0.999765
-chr1	4862097	.	ACACACACACACACACAC	.	.	.	END=4862114;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988749:9,9:7-9,7-9:17,10,0,6:8,2|9,15:5,1|6,4|7,1:219.231:326.675,113.385:0.631028,0.631028:3.55181e-24,0.0112089,0.988814
-chr1	4862140	.	ACACACACACACAC	.	.	.	END=4862153;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976578:7,7:7-7,7-7:9,11,0,0:7,9:NULL:141.55:326.675,113.385:0.0,0.0:2.90656e-20,0.0134479,0.986579
-chr1	4864608	.	AAACAAACAAAC	.	.	.	END=4864619;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:153.582:326.675,113.385:0.0,0.0:0.0,1.29397e-06,1.0
-chr1	4866501	.	CCAGGCTGGCCTCCAGGCTGGCCTCCAGGCTGGCCT	.	.	.	END=4866536;RU=ccaggctggcct;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999134:3,3:3-3,3-3:14,6,0,2:3,14:2,2:130.066:326.675,113.385:0.0,0.0:1.10892e-17,0.000575615,0.99943
-chr1	4867295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=4867334;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.943524:20,20:7-21,7-21:9,20,0,11:20,9:7,1|8,3|10,1|12,1|13,1|15,3|19,1:314.66:326.675,113.385:6.33959,6.33959:2.54871e-11,0.028072,0.971984
-chr1	4867339	.	TACATACATACATACA	.	.	.	END=4867354;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,17,0,3:4,19:3,3:256.592:326.675,113.385:0.0,0.0:0.0,1.11741e-05,0.999993
-chr1	4870254	.	TATTTATTTATT	.	.	.	END=4870265;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999891:3,3:3-3,3-3:16,8,0,3:3,16:2,3:156.429:326.675,113.385:0.0,0.0:0.0,4.43e-05,0.999956
-chr1	4871522	.	TCCTCCTCCTCC	.	.	.	END=4871533;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:253.255:326.675,113.385:0.0,0.0:0.0,5.23008e-10,1.0
-chr1	4874307	.	GGAAGGAAGGAA	.	.	.	END=4874318;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999929:3,3:3-3,3-3:17,5,0,0:3,17:NULL:113.657:326.675,113.385:0.0,0.0:0.0,3.86341e-05,0.999963
-chr1	4874466	.	AACAACAACAACAAC	.	.	.	END=4874480;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993029:5,5:4-5,4-5:11,8,0,0:5,11:NULL:115.916:326.675,113.385:0.492866,0.492866:1.06517e-32,0.00475677,0.995257
-chr1	4877242	.	TATTTATTTATTTATT	.	.	.	END=4877257;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999635:4,4:4-4,4-4:15,3,0,0:4,15:NULL:86.5963:326.675,113.385:0.0,0.0:3e-45,0.000210023,0.99979
-chr1	4878697	.	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	.	.	.	END=4878766;RU=ctctt;PERIOD=5;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.869346:14,14:13-14,13-14:6,9,0,11:14,6:2,1|3,2|5,2|7,1|10,1|11,1|12,3:187.457:326.675,113.385:0.495841,0.495841:3.7595e-17,0.0802297,0.919866
-chr1	4878791	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	.	END=4878822;RU=ctcc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.385621:8,8:6-8,6-8:3,10,0,0:8,3:NULL:108.263:326.675,113.385:0.592572,0.592572:5.86256e-05,0.414281,0.585739
-chr1	4880388	.	CTTCTTCTTCTT	.	.	.	END=4880399;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,13,0,0:4,23:NULL:208.752:326.675,113.385:0.0,0.0:0.0,1.05248e-06,1.0
-chr1	4881181	.	TGTTTTGTTTTGTTT	.	.	.	END=4881195;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999866:3,3:2-3,2-3:16,4,0,0:3,16:NULL:98.8823:326.675,113.385:0.44763,0.44763:0.0,7.15648e-05,0.999932
-chr1	4882279	.	TTATTATTATTA	.	.	.	END=4882290;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.910161:4,4:4-4,4-4:7,7,0,0:4,7:NULL:89.739:326.675,113.385:0.0,0.0:1.5882e-21,0.056422,0.943661
-chr1	4885247	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	.	END=4885286;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.973807:10,10:10-11,10-11:9,15,0,9:10,9:3,2|4,1|6,2|7,2|9,2:249.563:326.675,113.385:0.425627,0.425627:4.41641e-18,0.0157938,0.984241
-chr1	4885324	.	TTAGTTAGTTAGTTAGTTAGTTAG	.	.	.	END=4885347;RU=ttag;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998726:6,6:5-6,5-6:13,13,0,6:6,13:3,2|5,4:218.947:326.675,113.385:0.40582,0.40582:1.3011e-26,0.000756045,0.999248
-chr1	4890962	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=4890997;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:9,9:9-9,9-9:22,10,0,5:9,22:2,1|3,1|4,1|8,2:219.858:326.675,113.385:0.0990099,0.0990099:0.0,1.1242e-06,1.0
-chr1	4894530	.	GTTGGTTGGTTG	.	.	.	END=4894541;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:213.064:326.675,113.385:0.0,0.0:0.0,4.05818e-07,1.0
-chr1	4895853	.	CTCACTCACTCA	.	.	.	END=4895864;RU=ctca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,14,0,0:3,18:NULL:199.106:326.675,113.385:0.0,0.0:0.0,1.80082e-05,0.999985
-chr1	4899661	.	ACACACACACACACAC	.	.	.	END=4899676;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999948:8,8:8-8,8-8:26,12,0,2:7,2|8,24:6,2:240.928:326.675,113.385:0.0990099,0.0990099:3.6123e-41,5.54085e-05,0.999948
-chr1	4902415	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=4902432;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99869:9,9:9-12,9-12:14,7,0,2:9,14:7,2:137.093:326.675,113.385:1.27688,1.27688:1.593e-24,0.000449994,0.999553
-chr1	4902708	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=4902725;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.866791:9,9:9-10,9-10:7,8,0,0:9,7:NULL:102.351:326.675,113.385:0.486863,0.486863:2.29488e-12,0.0699126,0.930182
-chr1	4903639	.	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	.	.	.	END=4903674;RU=tttttg;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999917:6,6:6-6,6-6:17,9,0,2:6,17:3,1|5,1:173.895:326.675,113.385:0.0,0.0:0.0,6.41162e-05,0.99994
-chr1	4903855	.	TTTGTTTGTTTG	.	.	.	END=4903866;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990731:3,3:3-3,3-3:10,14,0,0:3,10:NULL:170.769:326.675,113.385:0.0,0.0:5.87266e-34,0.00569124,0.994324
-chr1	4905039	.	TACATACATACA	.	.	.	END=4905050;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,6,0,3:3,19:2,3:151.536:326.675,113.385:0.0,0.0:0.0,5.64564e-06,0.999995
-chr1	4905095	.	TGGATGGATGGA	.	.	.	END=4905106;RU=tgga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,4,0,2:3,25:2,2:148.365:326.675,113.385:0.0,0.0:0.0,8.21081e-08,1.0
-chr1	4909777	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4909828;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.321447:26,36:25-26,25-36:5,15,0,17:25,2|26,3:6,3|11,1|12,2|13,2|14,2|15,1|17,1|20,1|22,1|24,1|25,1|33,1:305.858:326.675,113.385:0.284901,4.78637:2.06714e-08,0.0110324,0.988992
-chr1	4909833	.	ATGCATGCATGC	.	.	.	END=4909844;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999905:3,3:3-3,3-3:16,17,0,0:3,16:NULL:217.664:326.675,113.385:0.0,0.0:0.0,7.34374e-05,0.999926
-chr1	4914303	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=4914366;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.640366:16,16:15-16,15-16:4,12,0,9:16,4:3,1|5,1|9,1|12,1|13,3|14,1|15,1:192.607:326.675,113.385:0.499779,0.499779:4.19595e-09,0.200213,0.79983
-chr1	4914896	.	GGAGGAGGAGGA	.	.	.	END=4914907;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.93709:4,4:4-4,4-4:8,15,0,0:4,8:NULL:166.795:326.675,113.385:0.0,0.0:8.34997e-25,0.0488196,0.951257
-chr1	4916037	.	TACATACATACATACA	.	.	.	END=4916052;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,2|4,1:275.235:326.675,113.385:0.0,0.0:0.0,7.53442e-10,1.0
-chr1	4918464	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	.	END=4918491;RU=ggag;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.935308:7,7:7-7,7-7:8,15,0,0:7,8:NULL:175.432:326.675,113.385:0.29703,0.29703:2.75131e-15,0.0517317,0.948348
-chr1	4918494	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4918545;RU=ga;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.930118:25,26:21-26,21-26:6,14,0,7:25,3|26,3:5,1|8,2|10,2|11,1|21,1:212.74:326.675,113.385:1.98598,1.86701:0.00122754,0.952779,0.0460742
-chr1	4920839	.	TTATTATTATTA	.	.	.	END=4920850;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998916:4,4:4-4,4-4:13,3,0,2:4,13:3,2:92.8638:326.675,113.385:0.0,0.0:9.477e-41,0.000412151,0.999591
-chr1	4920879	.	TGGCTGGCTGGC	.	.	.	END=4920890;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995248:3,3:3-3,3-3:11,7,0,0:3,11:NULL:106.999:326.675,113.385:0.0,0.0:7.72716e-29,0.00241556,0.997593
-chr1	4920889	.	GCCAGCCAGCCA	.	.	.	END=4920900;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995246:3,3:3-3,3-3:11,7,0,0:3,11:NULL:107.018:326.675,113.385:0.0,0.0:3.17835e-37,0.00238722,0.997618
-chr1	4921013	.	ATTTATTTATTT	.	.	.	END=4921024;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983079:3,3:3-3,3-3:9,9,0,0:3,9:NULL:115.759:326.675,113.385:0.0,0.0:8.49186e-29,0.00831875,0.991703
-chr1	4921202	.	TTCTTCTTCTTC	.	.	.	END=4921213;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996708:4,4:4-4,4-4:12,4,0,0:4,12:NULL:86.1021:326.675,113.385:0.0,0.0:6.54629e-39,0.00186305,0.998141
-chr1	4921293	.	ATTTATTTATTTATTT	.	.	.	END=4921308;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996908:4,4:4-4,4-4:12,12,0,0:4,12:NULL:152.192:326.675,113.385:0.0,0.0:2.11086e-32,0.00229159,0.997715
-chr1	4922764	.	AAATAAATAAAT	.	.	.	END=4922775;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999375:3,3:3-3,3-3:14,9,0,2:3,14:2,2:161.812:326.675,113.385:0.0,0.0:1e-45,0.000258235,0.999743
-chr1	4925089	.	ATTCATTCATTCATTCATTC	.	.	.	END=4925108;RU=attc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,19,0,7:5,25:3,1|4,5|5,1:319.377:326.675,113.385:0.0,0.0:0.0,7.26226e-08,1.0
-chr1	4930713	.	ATCTATCTATCT	.	.	.	END=4930724;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:3,3:3-3,3-3:18,12,0,0:3,18:NULL:177.406:326.675,113.385:0.0,0.0:0.0,2.00988e-05,0.99998
-chr1	4931717	.	AGAGAGAGAGAGAG	.	.	.	END=4931730;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-8,7-8:22,21,0,6:7,22:5,4|6,2:328.993:326.675,113.385:0.21692,0.21692:1e-45,1.63351e-06,1.0
-chr1	4931731	.	ACACACACACAC	.	.	.	END=4931742;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:21,20,0,0:6,21:NULL:267.481:326.675,113.385:0.0,0.0:0.0,8.48974e-06,0.999994
-chr1	4935229	.	CTCCCTCCCTCCCTCC	.	.	.	END=4935244;RU=ctcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:198.54:326.675,113.385:0.0,0.0:0.0,1.37551e-06,1.0
-chr1	4936747	.	AAACAAACAAAC	.	.	.	END=4936758;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,10,0,2:3,22:2,2:194.602:326.675,113.385:0.0,0.0:0.0,8.6363e-07,1.0
-chr1	4937389	.	AACAACAACAACAACAAC	.	.	.	END=4937406;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,13,0,6:6,25:4,2|5,4:264.154:326.675,113.385:0.0,0.0:0.0,9.31293e-08,1.0
-chr1	4938098	.	AGAAAGAAAGAA	.	.	.	END=4938109;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999394:3,3:3-3,3-3:14,4,0,0:3,14:NULL:92.2743:326.675,113.385:0.0,0.0:1e-45,0.000270359,0.999734
-chr1	4940874	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4940918;RU=aaaac;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98792:9,9:9-9,9-9:10,5,0,4:9,10:3,1|5,1|6,1|7,1:119.203:326.675,113.385:0.0,0.0:6.96937e-28,0.00650601,0.993511
-chr1	4941227	.	TTGTTGTTGTTG	.	.	.	END=4941238;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999974:4,4:4-4,4-4:18,7,0,0:4,18:NULL:140.213:326.675,113.385:0.0,0.0:0.0,3.12652e-05,0.999971
-chr1	4941826	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4941867;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.304313:21,26:20-22,20-27:7,17,0,13:20,3|21,4:5,1|6,1|9,2|11,1|15,2|16,1|17,1|18,1|19,1|21,1|26,1:297.187:326.675,113.385:0.393557,2.53527:5.53095e-16,0.00150292,0.998504
-chr1	4943920	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=4943943;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994255:12,12:9-12,9-12:12,17,0,9:12,12:4,2|5,1|6,1|7,1|8,1|9,3:280.274:326.675,113.385:1.09539,1.09539:4.15738e-18,0.00303051,0.99698
-chr1	4944834	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=4944857;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99596:6,6:6-6,6-6:11,13,0,4:6,11:2,1|4,2|5,1:196.374:326.675,113.385:0.0,0.0:9.78336e-31,0.00239827,0.997609
-chr1	4946471	.	ATAACATATAACATATAACAT	.	.	.	END=4946491;RU=ataacat;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999471:3,3:3-3,3-3:14,7,0,2:3,14:2,2:133.637:326.675,113.385:0.0,0.0:2.875e-42,0.000263905,0.999736
-chr1	4957150	.	AAACAAACAAAC	.	.	.	END=4957161;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,5,0,0:3,25:NULL:146.34:326.675,113.385:0.0,0.0:0.0,1.3194e-07,1.0
-chr1	4958201	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=4958218;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,4,0,0:3,28:NULL:148.516:326.675,113.385:0.0,0.0:0.0,1.95092e-08,1.0
-chr1	4960946	.	ACACACACACACACACACACACAC	.	.	.	END=4960969;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991119:12,12:10-12,10-12:11,11,0,5:12,11:4,1|5,3|10,1:182.992:326.675,113.385:0.788731,0.788731:3.74833e-18,0.0052448,0.994768
-chr1	4967461	.	GGTGGTGGTGGT	.	.	.	END=4967472;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:231.014:326.675,113.385:0.0,0.0:0.0,2.10865e-06,1.0
-chr1	4967521	.	CTTGCTTGCTTG	.	.	.	END=4967532;RU=cttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:210.541:326.675,113.385:0.0,0.0:0.0,1.61021e-06,1.0
-chr1	4976938	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=4976965;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.794639:14,15:14-14,14-15:35,14,0,15:13,2|14,31|15,2:5,2|6,1|7,3|8,4|9,1|11,2|12,1|15,1:416.39:326.675,113.385:0.0,0.498798:1.45964e-38,2.05051e-08,1.0
-chr1	4977099	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4977144;RU=ag;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.467761:23,24:22-24,22-24:8,11,0,4:22,2|23,4|24,2:6,1|10,1|13,1|21,1:180.98:326.675,113.385:0.479355,0.832743:0.00041485,0.339338,0.660268
-chr1	4977990	.	TCATCATCATCATCA	.	.	.	END=4978004;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999902:5,5:5-5,5-5:17,12,0,2:5,17:4,2:199.785:326.675,113.385:0.0,0.0:0.0,6.39382e-05,0.99994
-chr1	4983563	.	CATCATCATCAT	.	.	.	END=4983574;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,14,0,3:4,26:3,3:252.485:326.675,113.385:0.0,0.0:0.0,5.93857e-08,1.0
-chr1	4985196	.	TTTGTTTGTTTG	.	.	.	END=4985207;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,11,0,3:3,30:2,3:240.878:326.675,113.385:0.0,0.0:0.0,2.65166e-09,1.0
-chr1	4996877	.	TATATATATATATATATA	.	.	.	END=4996894;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.909:9,9:5-9,5-9:8,6,0,0:9,8:NULL:85.502:326.675,113.385:1.94745,1.94745:2.03074e-09,0.0722748,0.92782
-chr1	4998367	.	CTCCCTCCCTCC	.	.	.	END=4998378;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:148.076:326.675,113.385:0.0,0.0:0.0,9.50006e-06,0.999993
-chr1	5001697	.	TTTTGTTTTGTTTTG	.	.	.	END=5001711;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999795:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.747:326.675,113.385:0.0,0.0:0.0,0.000154956,0.999849
-chr1	5003140	.	ACACACACACACACACACACACACACAC	.	.	.	END=5003167;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998635:14,14:13-14,13-14:20,17,0,8:13,2|14,18:7,1|8,1|9,1|10,1|12,2|13,2:305.347:326.675,113.385:0.19802,0.19802:3.33707e-24,0.00138137,0.998625
-chr1	5005661	.	GAGGAGGAGGAG	.	.	.	END=5005672;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,19,0,7:4,28:3,7:339.99:326.675,113.385:0.0,0.0:0.0,1.08848e-08,1.0
-chr1	5007022	.	TTTATTTTATTTTAT	.	.	.	END=5007036;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999989:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.73:326.675,113.385:0.0,0.0:0.0,1.56403e-05,0.999986
-chr1	5008480	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=5008511;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:20,15,0,8:8,20:3,1|4,3|5,1|6,2|7,1:279.858:326.675,113.385:0.0,0.0:0.0,5.71248e-06,0.999995
-chr1	5011517	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5011560;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998362:22,22:22-22,22-22:14,7,0,14:22,14:5,2|8,1|13,2|14,1|17,2|18,2|20,1|21,2|22,1:244.354:326.675,113.385:0.139319,0.139319:5.65472e-23,0.000382178,0.999621
-chr1	5011684	.	AAAACAAAACAAAACAAAAC	.	.	.	END=5011703;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,7,0,3:4,19:3,3:161.314:326.675,113.385:0.0,0.0:0.0,5.98742e-06,0.999995
-chr1	5012007	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	.	END=5012062;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.882252:14,14:14-14,14-14:6,11,0,8:14,6:5,2|8,1|11,3|12,2:186.386:326.675,113.385:0.355334,0.355334:4.35448e-15,0.0746844,0.92541
-chr1	5013650	.	CAGAGCAGAGCAGAGCAGAGCAGAGCAGAG	.	.	.	END=5013679;RU=cagag;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.925409:6,6:5-6,5-6:19,9,0,4:5,2|6,17:3,2|4,1|5,1:194.947:326.675,113.385:0.442564,0.442564:0.0,0.0746917,0.925404
-chr1	5014848	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5014891;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.836759:22,22:21-23,21-23:18,23,0,18:21,3|22,12|23,3:6,1|7,1|8,1|9,1|10,2|11,2|14,1|15,1|16,1|17,3|18,1|21,3:450.295:326.675,113.385:0.661665,0.661665:1.00629e-12,0.0123263,0.987699
-chr1	5019542	.	CGCTCGCTCGCT	.	.	.	END=5019553;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:37,18,0,2:3,37:2,2:329.618:326.675,113.385:0.0,0.0:0.0,5.87802e-11,1.0
-chr1	5020039	.	GCCAGCCAGCCA	.	.	.	END=5020050;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:53,11,0,0:3,53:NULL:310.857:326.675,113.385:0.0,0.0:0.0,1.15808e-15,1.0
-chr1	5022514	.	TTGTTGTTGTTG	.	.	.	END=5022525;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,11,0,0:4,21:NULL:181.785:326.675,113.385:0.0,0.0:0.0,3.66862e-06,1.0
-chr1	5023422	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5023467;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990676:23,23:12-23,12-23:17,30,0,22:22,3|23,14:4,1|6,2|7,3|8,3|9,1|11,2|12,3|13,1|15,1|17,2|21,3:533.46:326.675,113.385:5.35709,5.35709:2.13956e-14,0.00902075,0.991
-chr1	5024078	.	AATAATAATAATAATAATAATAATAATAATAATAATAATAAT	.	.	.	END=5024119;RU=aat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.719744:14,14:12-14,12-14:5,5,0,9:14,5:4,1|5,1|6,2|8,1|9,1|10,1|11,1|13,1:140.5:326.675,113.385:0.765136,0.765136:3.24644e-08,0.164517,0.835557
-chr1	5026610	.	CTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=5026631;RU=ct;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996622:11,11:11-12,11-12:12,6,0,3:11,12:8,1|10,2:129.641:326.675,113.385:0.284901,0.284901:1.52129e-18,0.00103294,0.998968
-chr1	5030577	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=5030644;RU=tccc;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0282725:10,10:5-10,5-10:0,0,0,4:NULL:3,1|4,1|7,1|10,1:29.1062:326.675,113.385:2.2931,2.2931:1.0,0.0,0.0
-chr1	5032870	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5032919;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.652812:25,25:23-28,23-28:5,4,0,25:25,5:4,1|6,2|8,1|9,1|10,1|11,2|12,2|13,1|14,1|16,1|17,2|19,1|20,1|21,4|22,2|24,1|25,1:258.187:326.675,113.385:1.7121,1.7121:2.82121e-14,0.0563919,0.943694
-chr1	5034803	.	ACCCACCCACCC	.	.	.	END=5034814;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.920083:3,3:3-3,3-3:7,16,0,0:3,7:NULL:173.165:326.675,113.385:0.19802,0.19802:5.54696e-21,0.0536464,0.946438
-chr1	5042658	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=5042677;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:5,5:5-5,5-5:19,12,0,0:5,19:NULL:191.35:326.675,113.385:0.0,0.0:0.0,2.86153e-05,0.999972
-chr1	5043950	.	GTTTGTTTGTTTGTTT	.	.	.	END=5043965;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:3-4,3-4:22,19,0,3:4,22:2,1|3,2:284.906:326.675,113.385:0.21692,0.21692:0.0,1.11147e-06,1.0
-chr1	5046122	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=5046183;RU=ct;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.029794:31,31:28-34,28-34:0,11,0,9:NULL:7,1|10,1|12,1|15,2|20,2|25,1|31,1:172.568:326.675,113.385:1.12192,1.12192:1.72614e-08,0.478179,0.521908
-chr1	5046685	.	GTGGTGGTGGTG	.	.	.	END=5046696;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,32,0,0:4,30:NULL:418.869:326.675,113.385:0.0990099,0.0990099:0.0,1.7048e-08,1.0
-chr1	5047709	.	TATATATATATATA	.	.	.	END=5047722;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984738:7,7:7-9,7-9:10,4,0,0:7,10:NULL:74.9247:326.675,113.385:0.922441,0.922441:4.13136e-16,0.0068031,0.993212
-chr1	5055484	.	TGCTGCTGCTGC	.	.	.	END=5055495;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,10,0,0:4,19:NULL:162.768:326.675,113.385:0.0,0.0:0.0,1.46827e-05,0.999986
-chr1	5064770	.	GGCTGGCTGGCT	.	.	.	END=5064781;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:194.449:326.675,113.385:0.0,0.0:0.0,4.37869e-05,0.999957
-chr1	5066467	.	TTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCT	.	.	.	END=5066502;RU=tttcct;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,16,0,6:6,24:2,1|3,1|4,2|5,2:288.471:326.675,113.385:0.0,0.0:0.0,3.17017e-07,1.0
-chr1	5068662	.	CTCTCTCTCTCTCTCTCT	.	.	.	END=5068679;RU=ct;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.94179:9,9:9-9,9-9:7,9,0,2:9,7:7,1|8,1:124.687:326.675,113.385:0.0,0.0:1.14451e-16,0.0254612,0.974589
-chr1	5071017	.	ATTTATTTATTT	.	.	.	END=5071028;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999334:3,3:3-3,3-3:14,13,0,0:3,14:NULL:171.023:326.675,113.385:0.0,0.0:1.43838e-40,0.000438231,0.999567
-chr1	5073289	.	CTTCCTTCCTTC	.	.	.	END=5073300;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:146.637:326.675,113.385:0.0,0.0:0.0,2.01791e-05,0.99998
-chr1	5073332	.	CCCTCTCCCTCTCCCTCTCCCTCT	CCCTCT	.	.	END=5073355;RU=ccctct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0145428:1,1:1-1,1-1:0,6,0,0:NULL:NULL:50.552:326.675,113.385:0.0,0.0:0.106345,0.511468,0.38237
-chr1	5074855	.	AAACAAACAAACAAAC	.	.	.	END=5074870;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999781:4,4:4-4,4-4:15,6,0,3:4,15:3,3:138.025:326.675,113.385:0.0,0.0:0.0,8.98934e-05,0.999911
-chr1	5075461	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5075502;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.334589:21,42:21-21,21-42:16,14,0,6:20,4|21,12:8,1|13,1|14,1|19,1|20,1|42,1:275.005:326.675,113.385:0.0,10.4015:2.64187e-15,0.000464744,0.999538
-chr1	5076742	.	AAACAAAACAAAACA	.	.	.	END=5076756;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976225:3,3:3-3,3-3:9,18,0,0:3,9:NULL:209.489:326.675,113.385:0.0,0.0:4.81057e-29,0.0183779,0.981659
-chr1	5083412	.	GGGCCGGGCCGGGCCGGGCC	.	.	.	END=5083431;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998278:4,4:4-4,4-4:13,18,0,2:4,13:3,2:232.973:326.675,113.385:0.0,0.0:3.013e-42,0.0013592,0.998647
-chr1	5084805	.	ATGTATGTATGT	.	.	.	END=5084816;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.527:326.675,113.385:0.0,0.0:0.0,2.36315e-06,1.0
-chr1	5087801	.	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	.	.	.	END=5087900;RU=ctttc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.224341:20,20:18-20,18-20:2,15,0,27:20,2:3,3|4,2|5,2|6,1|7,1|8,1|9,2|10,3|11,1|12,5|16,1|17,2|18,3:341.413:326.675,113.385:1.01397,1.01397:6.01713e-05,0.632259,0.367732
-chr1	5087905	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=5087943;RU=tgt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999969:13,13:13-13,13-13:18,5,0,11:13,18:4,2|5,1|6,3|8,1|9,1|10,2|12,1:207.319:326.675,113.385:0.0,0.0:2.99767e-37,2.41469e-05,0.999978
-chr1	5089647	.	TTTATTTTATTTTAT	.	.	.	END=5089661;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:169.797:326.675,113.385:0.0,0.0:0.0,3.75043e-06,1.0
-chr1	5093894	.	ATTTTATTTTATTTT	.	.	.	END=5093908;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:210.294:326.675,113.385:0.0,0.0:0.0,2.23212e-05,0.999979
-chr1	5094712	.	ATATATATATATATATATATATATATATATAT	.	.	.	END=5094743;RU=at;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.957031:16,16:13-16,13-16:10,12,0,0:16,10:NULL:155.669:326.675,113.385:1.06729,1.06729:4.33584e-11,0.0290692,0.970985
-chr1	5094744	.	ACACACACACACACAC	.	.	.	END=5094759;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998945:8,8:8-8,8-8:14,12,0,3:8,14:6,2|7,1:191.816:326.675,113.385:0.139319,0.139319:1.03682e-19,0.000471918,0.99953
-chr1	5094790	.	ACACACACACACAC	.	.	.	END=5094803;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999462:7,7:7-7,7-7:14,11,0,4:7,14:6,1|7,3:189.759:326.675,113.385:0.0,0.0:0.0,4.86949e-05,0.999955
-chr1	5097446	.	TTTATTTATTTA	.	.	.	END=5097457;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:155.907:326.675,113.385:0.0,0.0:0.0,4.98331e-06,0.999995
-chr1	5102138	.	ATTTTATTTTATTTTATTTT	.	.	.	END=5102157;RU=atttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995369:4,4:4-4,4-4:11,12,0,2:4,11:3,2:170.556:326.675,113.385:0.0,0.0:2.25603e-36,0.00291734,0.997088
-chr1	5106170	.	ATTTATTTATTT	.	.	.	END=5106181;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:207.406:326.675,113.385:0.0,0.0:0.0,1.2672e-05,0.999987
-chr1	5119029	.	TGTATGTATGTA	.	.	.	END=5119040;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:232.028:326.675,113.385:0.0,0.0:0.0,3.10227e-06,1.0
-chr1	5120108	.	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=5120132;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:5,5:5-5,5-5:18,8,0,3:5,18:4,3:172.739:326.675,113.385:0.0,0.0:0.0,7.62036e-06,0.999994
-chr1	5122238	.	ATTTTATTTTATTTT	.	.	.	END=5122252;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:182.449:326.675,113.385:0.0,0.0:0.0,7.64385e-06,0.999994
-chr1	5124506	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=5124523;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999951:9,9:9-9,9-9:17,17,0,8:9,17:5,2|6,1|7,1|8,4:292.165:326.675,113.385:0.139319,0.139319:5.24719e-27,2.88864e-05,0.999972
-chr1	5130293	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=5130313;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99936:7,7:6-7,6-7:14,11,0,6:7,14:3,2|4,2|5,2:199.703:326.675,113.385:0.195027,0.195027:4.93393e-32,0.000344328,0.999659
-chr1	5131927	.	TTTATTTATTTATTTATTTATTTA	.	.	.	END=5131950;RU=ttta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,8,0,4:6,23:3,3|5,1:195.315:326.675,113.385:0.0,0.0:0.0,5.79974e-07,1.0
-chr1	5136692	.	TAATTAATTAATTAAT	.	.	.	END=5136707;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:241.36:326.675,113.385:0.0,0.0:0.0,4.79915e-06,0.999995
-chr1	5136778	.	TTTGTTTGTTTGTTTG	.	.	.	END=5136793;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:23,16,0,4:4,23:3,4:265.691:326.675,113.385:0.169767,0.169767:0.0,3.97615e-07,1.0
-chr1	5137285	.	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAA	.	.	.	END=5137324;RU=aacaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:8,8:7-8,7-8:18,19,0,11:8,18:3,2|4,1|5,3|6,2|7,3:330.796:326.675,113.385:0.311527,0.311527:0.0,2.48916e-05,0.999978
-chr1	5138729	.	AAATAAATAAAT	.	.	.	END=5138740;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999945:3,3:3-3,3-3:17,7,0,2:3,17:2,2:140.376:326.675,113.385:0.0,0.0:0.0,2.30953e-05,0.999979
-chr1	5139656	.	CACACACACACACACACACACACACACACACACACA	.	.	.	END=5139691;RU=ca;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.408681:18,18:17-19,17-19:15,9,0,8:17,2|18,10|19,3:8,1|9,1|10,1|12,3|14,1|17,1:223.782:326.675,113.385:0.646679,0.646679:6.46431e-13,0.00452802,0.995484
-chr1	5144394	.	TAAATAAATAAA	.	.	.	END=5144405;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,9,0,2:3,25:2,2:191.591:326.675,113.385:0.0,0.0:0.0,1.22971e-07,1.0
-chr1	5144427	.	AAAAGAAAAGAAAAG	.	.	.	END=5144441;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:164.921:326.675,113.385:0.0,0.0:0.0,7.35247e-07,1.0
-chr1	5146387	.	CTCTCTCTCTCTCT	.	.	.	END=5146400;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966795:7,7:7-7,7-7:9,12,0,0:7,9:NULL:144.35:326.675,113.385:0.29703,0.29703:2.06253e-17,0.0224026,0.977639
-chr1	5151445	.	TTGTTGTTGTTG	.	.	.	END=5151456;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999896:4,4:4-4,4-4:16,17,0,4:4,16:3,4:250.819:326.675,113.385:0.0,0.0:0.0,7.1918e-05,0.999932
-chr1	5152296	.	AAGTCAAGTCAAGTC	.	.	.	END=5152310;RU=aagtc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,7,0,2:3,25:2,2:180.137:326.675,113.385:0.0,0.0:0.0,1.04653e-07,1.0
-chr1	5155085	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=5155102;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.300237:6,7:6-6,6-8:15,10,0,3:6,15:5,2|7,1:186.515:326.675,113.385:0.0,0.859278:0.0,3.67236e-08,1.0
-chr1	5162575	.	TCCCCCTCCCCCTCCCCC	.	.	.	END=5162592;RU=tccccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99991:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.329:326.675,113.385:0.0,0.0:0.0,5.99108e-05,0.999941
-chr1	5163622	.	TCTCTCTCTCTCTCTC	.	.	.	END=5163637;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988585:8,8:8-9,8-9:23,10,0,2:8,21|9,2:4,1|7,1:212.43:326.675,113.385:0.425627,0.425627:0.0,8.37333e-07,1.0
-chr1	5164581	.	TGTTTTGTTTTGTTT	.	.	.	END=5164595;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:213.3:326.675,113.385:0.0,0.0:0.0,7.12203e-08,1.0
-chr1	5170810	.	CCACCACCACCA	.	.	.	END=5170821;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:326.038:326.675,113.385:0.0,0.0:0.0,7.19001e-07,1.0
-chr1	5173050	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=5173067;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999982:6,6:6-6,6-6:18,8,0,0:6,18:NULL:144.716:326.675,113.385:0.0,0.0:0.0,2.45148e-05,0.999978
-chr1	5173130	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=5173165;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995345:9,9:8-9,8-9:11,7,0,3:9,11:4,1|8,2:133.298:326.675,113.385:0.298675,0.298675:2.13587e-23,0.0021916,0.997814
-chr1	5181851	.	TAAATAAATAAA	.	.	.	END=5181862;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999774:3,3:3-3,3-3:15,5,0,2:3,15:2,2:116.435:326.675,113.385:0.0,0.0:0.0,8.72359e-05,0.999917
-chr1	5195638	.	GGGTGGGTGGGT	.	.	.	END=5195649;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988988:3,3:3-3,3-3:10,18,0,0:3,10:NULL:206.144:326.675,113.385:0.0,0.0:1.91723e-29,0.00707587,0.992941
-chr1	5199281	.	AACAACAACAACAACAACAAC	.	.	.	END=5199301;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,18,0,4:7,22:3,1|4,1|5,1|6,1:283.57:326.675,113.385:0.0,0.0:0.0,1.18639e-06,1.0
-chr1	5199415	.	TCAATTCAATTCAAT	.	.	.	END=5199429;RU=tcaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:173.551:326.675,113.385:0.0,0.0:0.0,7.79094e-07,1.0
-chr1	5203454	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5203499;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.990147:23,24:8-23,8-24:16,16,0,20:21,2|22,3|23,9|24,2:4,3|6,3|7,1|8,2|9,2|11,1|13,1|15,2|16,1|19,1|20,2|24,1:398.603:326.675,113.385:6.28355,6.4573:3.53341e-14,0.00125951,0.998746
-chr1	5204415	.	AAAACAAAACAAAAC	.	.	.	END=5204429;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:207.813:326.675,113.385:0.0,0.0:0.0,1.32214e-06,1.0
-chr1	5206150	.	TATTATTATTAT	.	.	.	END=5206161;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:179.209:326.675,113.385:0.0,0.0:0.0,5.83942e-06,0.999995
-chr1	5209488	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=5209507;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:29,17,0,4:5,29:2,2|3,1|4,1:305.847:326.675,113.385:0.0,0.0:0.0,1.4108e-08,1.0
-chr1	5212542	.	AATAAATAAATA	.	.	.	END=5212553;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999534:3,3:3-3,3-3:14,16,0,0:3,14:NULL:200.165:326.675,113.385:0.0,0.0:5e-44,0.000297945,0.999705
-chr1	5214463	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5214514;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.816593:26,26:22-26,22-26:8,24,0,22:25,2|26,6:5,2|6,1|8,1|10,2|12,2|14,2|15,1|16,1|17,2|20,1|21,3|22,1|23,1|24,1|26,1:439.895:326.675,113.385:1.52231,1.52231:7.61869e-14,0.109333,0.890764
-chr1	5214858	.	ACAAACAAACAAACAAACAAACAA	.	.	.	END=5214881;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:32,6,0,6:6,32:3,1|4,2|5,3:227.028:326.675,113.385:0.0,0.0:0.0,7.81639e-10,1.0
-chr1	5215016	.	AAACAAACAAACAAAC	.	.	.	END=5215031;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999896:4,4:4-4,4-4:16,14,0,4:4,16:3,4:222.896:326.675,113.385:0.0,0.0:0.0,5.2001e-05,0.999949
-chr1	5215414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=5215441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999947:7,7:6-7,6-7:17,11,0,7:7,17:3,1|5,2|6,4:222.254:326.675,113.385:0.35561,0.35561:0.0,2.25514e-05,0.999979
-chr1	5215633	.	GTTTTTTTGTTTTTTTGTTTTTTT	.	.	.	END=5215656;RU=gttttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929627:3,3:3-3,3-3:7,12,0,0:3,7:NULL:137.474:326.675,113.385:0.0,0.0:4.70423e-20,0.051824,0.948258
-chr1	5222650	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5222685;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.591313:18,18:7-20,7-20:12,7,0,8:17,3|18,9:5,1|7,2|9,1|11,1|12,1|13,2:186.063:326.675,113.385:3.56991,3.56991:4.53689e-11,0.404719,0.595353
-chr1	5222686	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5222719;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988323:17,17:12-17,12-17:10,9,0,6:17,10:6,3|12,1|16,1|17,1:168.324:326.675,113.385:2.15787,2.15787:1.15349e-24,0.00401421,0.995997
-chr1	5223713	.	TTTGTTTGTTTG	.	.	.	END=5223724;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999719:3,3:3-3,3-3:15,19,0,0:3,15:NULL:235.265:326.675,113.385:0.0,0.0:6e-45,0.000233093,0.999767
-chr1	5224486	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	.	END=5224521;RU=ttcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999249:9,9:8-9,8-9:14,10,0,0:9,14:NULL:153.745:326.675,113.385:0.270063,0.270063:5.5024e-40,0.000564618,0.999438
-chr1	5225503	.	TTTATTTATTTATTTATTTA	.	.	.	END=5225522;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:5,5:5-5,5-5:18,15,0,8:5,18:2,1|3,3|4,4:267.129:326.675,113.385:0.0,0.0:0.0,1.16671e-05,0.999987
-chr1	5225865	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5225896;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.378564:16,16:13-16,13-16:8,12,0,9:15,3|16,5:5,1|7,1|8,1|9,1|11,1|12,3|16,1:226.415:326.675,113.385:0.967363,0.967363:9.83265e-13,0.604702,0.395359
-chr1	5228543	.	TTTATTTATTTA	.	.	.	END=5228554;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,14,0,0:3,18:NULL:201.611:326.675,113.385:0.0,0.0:0.0,2.33616e-05,0.999979
-chr1	5232603	.	TAATAATAATAA	.	.	.	END=5232614;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,4,0,0:4,20:NULL:116.086:326.675,113.385:0.0,0.0:0.0,5.85088e-06,0.999995
-chr1	5237129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5237166;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996205:19,19:10-19,10-19:17,7,0,8:18,2|19,15:10,1|11,1|14,1|15,1|16,1|17,2|18,1:205.591:326.675,113.385:3.76193,3.76193:5.78756e-18,0.00365141,0.99636
-chr1	5237829	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5237896;RU=ttct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.762862:18,18:17-18,17-18:5,14,0,17:18,5:5,2|6,2|8,3|9,1|10,2|11,1|12,1|13,1|15,2|16,1|17,1:276.605:326.675,113.385:0.494455,0.494455:4.1147e-18,0.076631,0.923462
-chr1	5248663	.	ACCACCACCACC	.	.	.	END=5248674;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,18,0,4:4,32:3,4:326.504:326.675,113.385:0.0,0.0:0.0,7.37035e-10,1.0
-chr1	5256153	.	GAGCAAGAGCAAGAGCAA	.	.	.	END=5256170;RU=gagcaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:269.734:326.675,113.385:0.0,0.0:0.0,9.40678e-10,1.0
-chr1	5258418	.	CACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5258457;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:20,20:20-20,20-20:47,24,0,30:19,7|20,38|21,2:4,1|5,2|6,2|7,1|8,1|9,3|10,2|12,1|14,2|15,2|16,3|17,2|18,1|19,5|20,2:681.747:326.675,113.385:0.0990099,0.0990099:0.0,9.9887e-08,1.0
-chr1	5258712	.	GTTTGTTTGTTTGTTTGTTT	.	.	.	END=5258731;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:5,5:4-5,4-5:31,17,0,3:4,2|5,29:3,1|4,2:311.605:326.675,113.385:0.298675,0.298675:0.0,1.61664e-05,0.999986
-chr1	5259167	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=5259184;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992784:9,9:8-9,8-9:21,12,0,3:8,3|9,18:5,1|7,1|8,1:222.927:326.675,113.385:0.298675,0.298675:1.90519e-30,0.00723947,0.992776
-chr1	5260536	.	AGAGAGAGAGAG	.	.	.	END=5260547;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:27,11,0,2:6,27:4,1|5,1:221.878:326.675,113.385:0.139319,0.139319:0.0,3.43838e-08,1.0
-chr1	5261841	.	ACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCAC	.	.	.	END=5261894;RU=accctgtgaggggagcac;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.457035:3,3:1-3,1-3:8,18,0,0:3,8:NULL:212.032:326.675,113.385:0.982146,0.982146:1.46782e-08,0.542026,0.458084
-chr1	5274498	.	CACACACACACACACACACACACACACACA	.	.	.	END=5274527;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999387:15,15:14-15,14-15:20,18,0,9:14,2|15,18:4,2|5,2|10,1|11,1|14,3:327.507:326.675,113.385:0.290354,0.290354:1.052e-19,0.000612737,0.999392
-chr1	5275399	.	CCAACCAACCAACCAA	.	.	.	END=5275414;RU=ccaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999116:4,4:3-4,3-4:14,9,0,0:4,14:NULL:137.796:326.675,113.385:0.412766,0.412766:4e-45,0.000609573,0.999393
-chr1	5277383	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5277428;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.947523:23,23:22-23,22-23:11,11,0,8:22,2|23,9:5,1|7,1|8,1|16,2|17,3:221.047:326.675,113.385:0.335467,0.335467:4.2736e-11,0.0337459,0.966317
-chr1	5287020	.	CTTTCTTTCTTT	.	.	.	END=5287031;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:182.96:326.675,113.385:0.0,0.0:0.0,2.75502e-06,1.0
-chr1	5287167	.	CACTCACTCACT	.	.	.	END=5287178;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:222.996:326.675,113.385:0.0,0.0:0.0,9.17748e-07,1.0
-chr1	5292757	.	TATTTATTTATTTATT	.	.	.	END=5292772;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,12,0,2:4,31:2,1|3,1:249.227:326.675,113.385:0.0,0.0:0.0,2.36608e-09,1.0
-chr1	5293618	.	ACCCACCCACCC	.	.	.	END=5293629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997083:3,3:3-3,3-3:11,20,0,2:3,11:2,2:235.353:326.675,113.385:0.0,0.0:1.65754e-32,0.00180725,0.9982
-chr1	5296079	.	TCTCTCTCTCTC	.	.	.	END=5296090;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:24,16,0,0:6,24:NULL:243.658:326.675,113.385:0.339533,0.339533:0.0,1.01115e-06,1.0
-chr1	5297215	.	TTATTATTATTA	.	.	.	END=5297226;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:285.39:326.675,113.385:0.0,0.0:0.0,6.96663e-09,1.0
-chr1	5301831	.	AAAGAAAGAAAG	.	.	.	END=5301842;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,20,0,0:3,22:NULL:269.307:326.675,113.385:0.0,0.0:0.0,2.30349e-06,1.0
-chr1	5303346	.	TTTGTTTGTTTGTTTG	.	.	.	END=5303361;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999824:4,4:4-4,4-4:15,10,0,6:4,15:3,6:189.096:326.675,113.385:0.0,0.0:0.0,7.15698e-05,0.999932
-chr1	5303465	.	TAGGTAGGTAGG	.	.	.	END=5303476;RU=tagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,5,0,3:3,27:2,3:170.725:326.675,113.385:0.0,0.0:0.0,1.88107e-08,1.0
-chr1	5304109	.	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	.	.	.	END=5304158;RU=caaag;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999662:10,10:6-10,6-10:16,13,0,4:10,16:2,1|6,2|9,1:221.236:326.675,113.385:1.8278,1.8278:0.0,0.000306716,0.999697
-chr1	5305886	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5305925;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.357551:20,24:20-20,10-24:17,18,0,14:19,6|20,11:6,1|7,3|8,2|9,2|13,1|14,1|17,1|18,1|20,1|24,1:379.134:326.675,113.385:0.139319,5.17495:3.42354e-19,0.00235956,0.997647
-chr1	5306965	.	ATCATCATCATC	.	.	.	END=5306976;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:29,16,0,5:4,29:3,5:297.402:326.675,113.385:0.0,0.0:0.0,8.0037e-09,1.0
-chr1	5312273	.	TCTCTCTCTCTCTCTC	.	.	.	END=5312288;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99995:8,8:8-9,8-9:22,4,0,3:7,2|8,20:5,2|6,1:155.316:326.675,113.385:0.39604,0.39604:4.36e-43,6.0267e-05,0.999941
-chr1	5312289	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5312324;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981324:18,18:17-19,17-19:15,4,0,14:17,3|18,12:5,2|6,1|7,1|9,2|10,2|11,1|14,2|16,1|17,2:221.142:326.675,113.385:0.393557,0.393557:4.0892e-18,0.016289,0.983747
-chr1	5312324	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5312357;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.869753:17,17:16-17,16-17:17,9,0,7:16,3|17,14:4,1|8,3|13,1|16,2:218.032:326.675,113.385:0.419363,0.419363:3.86306e-25,0.13016,0.869937
-chr1	5318871	.	ACACACACACACACACACACACACACAC	.	.	.	END=5318898;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999671:14,14:14-14,14-14:16,10,0,11:14,16:4,1|5,1|7,1|8,1|9,1|11,2|12,2|13,2:246.933:326.675,113.385:0.0,0.0:1.71366e-21,0.00011102,0.999888
-chr1	5327635	.	CTCTTTCCCTCTTTCCCTCTTTCC	.	.	.	END=5327658;RU=ctctttcc;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985248:3,3:3-3,3-3:10,15,0,0:3,10:NULL:176.475:326.675,113.385:0.19802,0.19802:5.32981e-25,0.013287,0.986741
-chr1	5333023	.	TATATATATATATATA	.	.	.	END=5333038;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.802531:8,8:8-8,8-8:6,2,0,0:8,6:NULL:42.6017:326.675,113.385:0.0,0.0:6.33462e-08,0.0949859,0.905114
-chr1	5334011	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=5334042;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991203:16,16:16-16,16-16:14,4,0,4:15,2|16,12:5,1|10,1|13,1|15,1:131.76:326.675,113.385:0.139319,0.139319:1.15746e-14,0.00625518,0.99376
-chr1	5337377	.	TTTATTTATTTA	.	.	.	END=5337388;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:202.756:326.675,113.385:0.0,0.0:0.0,2.36752e-05,0.999979
-chr1	5340739	.	TATTTATTTATT	.	.	.	END=5340750;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983407:3,3:3-3,3-3:9,5,0,2:3,9:2,2:96.8479:326.675,113.385:0.0,0.0:4.01017e-31,0.00686109,0.993158
-chr1	5341947	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	.	END=5341974;RU=aagg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979243:7,7:6-7,6-7:9,15,0,2:7,9:6,2:192.077:326.675,113.385:0.442564,0.442564:5.8151e-25,0.0143806,0.985652
-chr1	5357169	.	GGGTGGGTGGGT	.	.	.	END=5357180;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984164:3,3:3-3,3-3:9,24,0,0:3,9:NULL:245.497:326.675,113.385:0.0,0.0:2.5687e-24,0.0106184,0.989403
-chr1	5365050	.	CCTCCCTCCCTC	.	.	.	END=5365061;RU=cctc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,9,0,2:3,27:2,2:205.87:326.675,113.385:0.0,0.0:0.0,1.47401e-08,1.0
-chr1	5368230	.	CTCTTGCGCTCTTGCGCTCTTGCGCTCTTGCG	.	.	.	END=5368261;RU=ctcttgcg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999916:4,4:4-4,4-4:16,17,0,3:4,16:3,3:243.009:326.675,113.385:0.0,0.0:0.0,8.91984e-05,0.999911
-chr1	5368294	.	CTTGCACTCTTGCACTCTTGCACT	.	.	.	END=5368317;RU=cttgcact;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999965:3,3:3-3,3-3:18,17,0,0:3,18:NULL:235.837:326.675,113.385:0.0,0.0:0.0,4.25038e-05,0.999957
-chr1	5369349	.	GTTTGTTTGTTT	.	.	.	END=5369360;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999752:3,3:3-3,3-3:15,4,0,2:3,15:2,2:112.933:326.675,113.385:0.0,0.0:0.0,8.85613e-05,0.999911
-chr1	5369470	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT	.	.	END=5369505;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0133204:12,12:15-19,15-19:0,5,0,0:NULL:NULL:47.5052:326.675,113.385:1.68323,1.68323:0.354018,0.483083,0.162943
-chr1	5374204	.	TTTGTTTGTTTGTTTG	.	.	.	END=5374219;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999914:4,4:4-4,4-4:17,4,0,0:4,17:NULL:104.508:326.675,113.385:0.0,0.0:0.0,5.65094e-05,0.999947
-chr1	5380595	.	ACACACACACAC	.	.	.	END=5380606;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,13,0,0:6,23:NULL:210.926:326.675,113.385:0.0,0.0:0.0,8.84609e-07,1.0
-chr1	5380856	.	TCTGTCTGTCTG	.	.	.	END=5380867;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,12,0,2:3,30:2,2:243.845:326.675,113.385:0.0,0.0:0.0,3.59975e-09,1.0
-chr1	5380890	.	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5380943;RU=ca;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.937524:27,27:18-27,18-27:8,15,0,18:27,8:7,1|9,1|11,2|12,1|13,1|14,1|17,2|18,1|22,3|23,1|25,3|26,1:317.864:326.675,113.385:4.08564,4.08564:5.81294e-08,0.0327406,0.967321
-chr1	5382870	.	GAGGAAGAGGAAGAGGAA	.	.	.	END=5382887;RU=gaggaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:197.584:326.675,113.385:0.0,0.0:0.0,2.89385e-06,1.0
-chr1	5384698	.	AGAAAGAAAGAAAGAA	.	.	.	END=5384713;RU=agaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994208:4,4:3-4,3-4:11,1,0,0:4,11:NULL:52.2596:326.675,113.385:0.452422,0.452422:1.09039e-36,0.00304955,0.996958
-chr1	5384783	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5384850;RU=ga;PERIOD=2;REF=34.0;EXPTHRESH=34	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.00722649:26,26:24-35,24-35:0,3,0,4:NULL:5,1|8,1|13,1|15,1:59.5948:326.675,113.385:2.9505,2.9505:0.523716,0.401562,0.0748556
-chr1	5384864	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	END=5384923;RU=agaa;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.995891:13,15:13-15,15-15:7,6,0,5:13,2|15,5:7,1|9,1|12,2|13,1:128.201:326.675,113.385:0.825531,0.0:1.40358e-11,0.996498,0.00350955
-chr1	5390035	.	CCTCCTCCTCCT	.	.	.	END=5390046;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:25,13,0,3:4,25:3,3:233.407:326.675,113.385:0.21692,0.21692:0.0,8.32903e-08,1.0
-chr1	5391563	.	TTTCTTTCTTTC	.	.	.	END=5391574;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.858:326.675,113.385:0.0,0.0:0.0,2.44321e-06,1.0
-chr1	5393656	.	TTTATTTATTTA	.	.	.	END=5393667;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99984:3,3:3-3,3-3:16,6,0,0:3,16:NULL:119.896:326.675,113.385:0.0,0.0:0.0,8.31027e-05,0.999918
-chr1	5400536	.	GGGGTGGGGGTGGGGGTG	.	.	.	END=5400553;RU=ggggtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986756:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.634:326.675,113.385:0.0,0.0:5.56677e-27,0.00952345,0.990499
-chr1	5400652	.	TAAATAAATAAATAAA	.	.	.	END=5400667;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:169.93:326.675,113.385:0.0,0.0:0.0,2.37959e-06,1.0
-chr1	5401591	.	CAAACAAACAAACAAACAAA	.	.	.	END=5401610;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998896:5,5:4-5,4-5:15,18,0,0:5,15:NULL:226.268:326.675,113.385:0.284901,0.284901:5.5e-44,0.00102301,0.998982
-chr1	5407272	.	AATAAATAAATAAATA	.	.	.	END=5407287;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,20,0,4:4,32:2,2|3,1|4,1:340.155:326.675,113.385:0.0,0.0:0.0,1.50266e-09,1.0
-chr1	5411524	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5411557;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.900944:17,17:16-17,16-17:21,16,0,19:16,6|17,15:4,1|5,3|6,1|9,1|10,4|11,1|12,2|13,1|14,2|15,3:398.882:326.675,113.385:0.437216,0.437216:2.70896e-15,0.0991223,0.900982
-chr1	5412318	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=5412335;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999588:9,9:9-9,9-9:15,5,0,2:9,15:7,2:121.002:326.675,113.385:0.0,0.0:1.725e-24,0.000183454,0.999819
-chr1	5412585	.	GCAGGCAGGCAG	.	.	.	END=5412596;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:141.585:326.675,113.385:0.0,0.0:0.0,5.03885e-06,0.999995
-chr1	5414201	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5414252;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.799191:26,26:26-26,26-26:6,5,0,16:26,6:4,1|5,2|8,1|11,1|13,1|15,1|16,2|17,1|18,1|20,1|21,1|22,1|25,2:200.894:326.675,113.385:0.0,0.0:2.87718e-07,0.0580028,0.942083
-chr1	5420026	.	ATGTATGTATGT	.	.	.	END=5420037;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999831:3,3:3-3,3-3:16,4,0,0:3,16:NULL:101.288:326.675,113.385:0.0,0.0:0.0,9.05735e-05,0.999911
-chr1	5421453	.	AGAAAAGAAAAGAAA	.	.	.	END=5421467;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99925:3,3:3-3,3-3:14,11,0,2:3,14:2,2:171.015:326.675,113.385:0.0,0.0:1.787e-42,0.000363445,0.999637
-chr1	5421483	.	AACAAACAAACAAACA	.	.	.	END=5421498;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98592:4,4:4-4,4-4:10,10,0,3:4,10:2,3:155.459:326.675,113.385:0.0,0.0:7.92884e-30,0.00829948,0.991719
-chr1	5421960	.	TTTGTTTGTTTG	.	.	.	END=5421971;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998824:3,3:2-3,2-3:13,8,0,0:3,13:NULL:131.18:326.675,113.385:0.452422,0.452422:2.207e-42,0.000683346,0.999318
-chr1	5429464	.	GGGTGGGTGGGT	.	.	.	END=5429475;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992779:3,3:3-3,3-3:10,25,0,0:3,10:NULL:265.199:326.675,113.385:0.0,0.0:1.95984e-27,0.00480293,0.995206
-chr1	5439295	.	AAATAAATAAAT	.	.	.	END=5439306;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999972:3,3:3-3,3-3:17,14,0,3:3,17:2,3:218.014:326.675,113.385:0.0,0.0:0.0,1.9811e-05,0.99998
-chr1	5439862	.	AAAAACAAAAACAAAAAC	.	.	.	END=5439879;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,12,0,2:3,28:2,2:231.902:326.675,113.385:0.0,0.0:0.0,2.05311e-08,1.0
-chr1	5439880	.	CAAGCAAGCAAG	.	.	.	END=5439891;RU=caag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,14,0,2:3,28:2,2:247.995:326.675,113.385:0.0,0.0:0.0,1.62076e-08,1.0
-chr1	5440024	.	AAAACAAAACAAAAC	.	.	.	END=5440038;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:183.432:326.675,113.385:0.0,0.0:0.0,2.03527e-08,1.0
-chr1	5448684	.	GTGGTGGTGGTG	.	.	.	END=5448695;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:4,4:4-4,4-4:19,8,0,0:4,19:NULL:144.751:326.675,113.385:0.0,0.0:0.0,1.63653e-05,0.999986
-chr1	5448817	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5448840;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982701:6,6:6-6,6-6:9,13,0,5:6,9:2,1|4,2|5,2:191.308:326.675,113.385:0.0,0.0:8.67818e-27,0.0079832,0.992034
-chr1	5448857	.	AAACAAAACAAAACA	.	.	.	END=5448871;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.937648:3,3:3-3,3-3:8,13,0,0:3,8:NULL:154.225:326.675,113.385:0.220506,0.220506:1.31029e-26,0.0483356,0.95174
-chr1	5449710	.	TTTCTTTCTTTC	.	.	.	END=5449721;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:251.345:326.675,113.385:0.0,0.0:0.0,3.88499e-10,1.0
-chr1	5450202	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5450241;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.91676:20,20:19-20,19-20:20,22,0,30:18,2|19,4|20,14:6,1|7,2|8,2|9,4|10,2|11,3|13,4|14,1|15,2|17,2|18,3|19,4:532.856:326.675,113.385:0.391308,0.391308:2.08895e-13,0.0831682,0.916927
-chr1	5457139	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5457182;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.947557:22,23:22-22,21-23:22,8,0,11:20,2|21,5|22,15:5,1|6,1|10,1|14,1|16,1|17,1|18,1|19,1|21,2|23,1:292.012:326.675,113.385:0.0990099,0.738271:2.52359e-16,0.000188425,0.999812
-chr1	5457182	.	GAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5457205;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980078:12,12:10-12,10-12:21,12,0,6:10,2|11,2|12,17:8,1|9,1|10,2|11,2:261.833:326.675,113.385:0.640587,0.640587:1.28858e-27,0.0199597,0.980082
-chr1	5458563	.	GTTGGTTGGTTG	.	.	.	END=5458574;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:191.171:326.675,113.385:0.0,0.0:0.0,2.52026e-07,1.0
-chr1	5467842	.	TTGTTTGTTTGT	.	.	.	END=5467853;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.865:326.675,113.385:0.0,0.0:0.0,8.0646e-07,1.0
-chr1	5469905	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	.	END=5469964;RU=ttct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998617:15,15:13-16,13-16:13,23,0,23:15,13:2,1|4,2|5,1|7,1|8,2|9,2|10,2|11,6|12,2|13,1|14,3:441.154:326.675,113.385:0.554102,0.554102:2.05185e-19,0.000934836,0.999067
-chr1	5470375	.	ATTTATTTATTTATTTATTT	.	.	.	END=5470394;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:19,10,0,5:5,19:4,5:204.259:326.675,113.385:0.270063,0.270063:0.0,5.63075e-06,0.999995
-chr1	5487012	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=5487095;RU=aga;PERIOD=3;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0350084:26,26:26-28,26-28:0,13,0,14:NULL:5,1|8,1|10,1|15,2|16,1|19,1|21,1|22,3|24,1|26,2:224.711:326.675,113.385:0.788731,0.788731:0.213982,0.516544,0.269537
-chr1	5487104	.	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	.	.	.	END=5487154;RU=gag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.227302:17,17:10-17,10-17:3,6,0,7:17,3:5,2|7,1|8,1|10,2|11,1:122.998:326.675,113.385:3.21628,3.21628:1.88104e-06,0.621967,0.378086
-chr1	5491577	.	TTTCTTTCTTTCTTTC	.	.	.	END=5491592;RU=tttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999873:4,4:4-4,4-4:16,14,0,2:4,16:2,1|3,1:203.31:326.675,113.385:0.0,0.0:0.0,7.7951e-05,0.999925
-chr1	5495145	.	TATTATTATTAT	.	.	.	END=5495156;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:190.37:326.675,113.385:0.0,0.0:0.0,9.03848e-07,1.0
-chr1	5499413	.	AAACAAACAAAC	.	.	.	END=5499424;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:183.415:326.675,113.385:0.0,0.0:0.0,3.58705e-08,1.0
-chr1	5499767	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	AT	.	.	END=5499818;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	.
-chr1	5504534	.	TATTTATTTATT	.	.	.	END=5504545;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:216.165:326.675,113.385:0.0,0.0:0.0,3.61663e-07,1.0
-chr1	5513530	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5513567;RU=tc;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987245:19,19:11-19,11-19:11,10,0,11:19,11:5,1|6,1|8,1|9,1|13,2|14,2|15,3:226.557:326.675,113.385:3.57627,3.57627:1.20532e-13,0.00759209,0.992424
-chr1	5516671	.	TCTCTCTCTCTCTC	.	.	.	END=5516684;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999066:7,7:7-8,7-8:14,9,0,0:7,14:NULL:143.434:326.675,113.385:0.390807,0.390807:7.46736e-28,0.000425895,0.999576
-chr1	5518233	.	ACACACACACAC	.	.	.	END=5518244;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:203.485:326.675,113.385:0.139319,0.139319:0.0,1.84411e-08,1.0
-chr1	5522366	.	TTTATTTATTTA	.	.	.	END=5522377;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99986:3,3:3-3,3-3:16,19,0,0:3,16:NULL:231.943:326.675,113.385:0.0,0.0:0.0,0.000107282,0.999895
-chr1	5526299	.	TTATTTATTTATTTATTTATTTAT	.	.	.	END=5526322;RU=ttat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999737:6,6:6-6,6-6:15,3,0,2:6,15:5,2:102.456:326.675,113.385:0.0,0.0:2.452e-42,0.000103453,0.999896
-chr1	5531371	.	AAATAAATAAATAAAT	.	.	.	END=5531386;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:4,4:4-4,4-4:18,9,0,2:4,18:2,1|3,1:165.399:326.675,113.385:0.0,0.0:0.0,2.12228e-05,0.999979
-chr1	5532982	.	TGTGTGTGTGTGTGTG	.	.	.	END=5532997;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:27,12,0,3:8,27:6,1|7,2:250.369:326.675,113.385:0.0,0.0:1.72e-43,5.25782e-08,1.0
-chr1	5534046	.	ATGTATGTATGTATGT	.	.	.	END=5534061;RU=atgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,16,0,3:4,27:3,3:272.756:326.675,113.385:0.0,0.0:0.0,1.82221e-08,1.0
-chr1	5534075	.	TATGTATGTATGTATG	.	.	.	END=5534090;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,15,0,2:4,30:3,2:273.347:326.675,113.385:0.0,0.0:0.0,3.21582e-09,1.0
-chr1	5534127	.	TGTGTGTGTGTG	.	.	.	END=5534138;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:31,20,0,4:6,31:4,1|5,3:344.947:326.675,113.385:0.0,0.0:0.0,1.02131e-09,1.0
-chr1	5538600	.	TTTTGTTTTGTTTTG	.	.	.	END=5538614;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.842:326.675,113.385:0.0,0.0:0.0,3.18443e-07,1.0
-chr1	5539245	.	AGAGAGAGAGAG	.	.	.	END=5539256;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-7,6-7:20,15,0,0:6,20:NULL:216.86:326.675,113.385:0.236383,0.236383:0.0,7.99914e-06,0.999994
-chr1	5541995	.	TCTATCTATCTA	.	.	.	END=5542006;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,7,0,0:3,25:NULL:162.531:326.675,113.385:0.0,0.0:0.0,1.63627e-07,1.0
-chr1	5543920	.	AAACAAACAAACAAACAAAC	.	.	.	END=5543939;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:32,8,0,3:5,32:4,3:218.073:326.675,113.385:0.0,0.0:0.0,7.62889e-10,1.0
-chr1	5548928	.	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	.	.	.	END=5548963;RU=gtgtgc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:3-6,3-6:21,12,0,6:6,21:2,1|4,1|5,4:243.175:326.675,113.385:0.650759,0.650759:0.0,1.87243e-06,1.0
-chr1	5568606	.	TATATATATATATATATATATATATATATATA	.	.	.	END=5568637;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.241205:16,16:11-16,11-16:3,0,0,0:16,3:NULL:13.3392:326.675,113.385:1.94044,1.94044:0.0041078,0.534572,0.461435
-chr1	5568681	.	TCTCTCTCTCTCTCTCTCTC	.	.	.	END=5568700;RU=tc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.389106:10,10:10-10,10-10:3,1,0,0:10,3:NULL:20.8043:326.675,113.385:0.0,0.0:0.000122906,0.325088,0.674802
-chr1	5568724	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=5568751;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.667283:14,14:14-14,14-14:5,3,0,0:14,5:NULL:46.9753:326.675,113.385:0.0,0.0:4.33107e-07,0.162209,0.837866
-chr1	5571339	.	AACAACAACAAC	.	.	.	END=5571350;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999866:4,4:2-4,2-4:16,9,0,2:4,16:3,2:161.802:326.675,113.385:0.885129,0.885129:3.8e-44,6.70363e-05,0.999934
-chr1	5573523	.	GAAAGAAAGAAAGAAA	.	.	.	END=5573538;RU=gaaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-5,4-5:23,14,0,4:4,23:3,4:249.905:326.675,113.385:0.311527,0.311527:0.0,4.699e-07,1.0
-chr1	5573587	.	AAAGAAAGAAAG	.	.	.	END=5573598;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,15,0,2:3,24:3,2:244.91:326.675,113.385:0.0,0.0:0.0,1.01008e-07,1.0
-chr1	5579717	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5579762;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.28606:23,25:21-23,21-28:4,10,0,14:23,4:5,1|6,1|8,1|9,1|12,2|13,1|14,1|15,1|17,1|21,1|22,2|25,1:229.174:326.675,113.385:0.446534,1.60396:2.90831e-11,0.000185028,0.999818
-chr1	5581808	.	GTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5581829;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.918632:11,11:11-12,11-12:7,5,0,3:11,7:6,1|10,1|11,1:96.9763:326.675,113.385:0.40582,0.40582:1.2915e-18,0.016726,0.983311
-chr1	5585680	.	CTCTCTCTCTCT	.	.	.	END=5585691;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985692:6,6:6-6,6-6:10,9,0,0:6,10:NULL:122.269:326.675,113.385:0.0,0.0:2.78805e-20,0.00890045,0.99112
-chr1	5589327	.	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	.	.	.	END=5589356;RU=ggt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.964384:10,10:9-10,9-10:8,11,0,4:10,8:4,1|5,1|9,2:162.775:326.675,113.385:0.465241,0.465241:2.92195e-21,0.0195605,0.980478
-chr1	5589376	.	TGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5589399;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992728:12,12:9-12,9-12:11,11,0,4:12,11:7,1|10,1|11,2:180.542:326.675,113.385:1.30955,1.30955:2.36841e-16,0.00337366,0.996634
-chr1	5589780	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5589835;RU=tg;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.434615:28,28:25-29,25-29:4,10,0,15:28,4:4,1|8,2|10,2|11,1|13,2|14,2|18,2|19,1|21,1|26,1:229.133:326.675,113.385:1.42595,1.42595:5.64146e-05,0.301819,0.698134
-chr1	5592598	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5592667;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.217245:35,35:30-35,30-35:2,17,0,16:35,2:5,1|6,2|10,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|26,1|28,1|29,1|34,2:297.947:326.675,113.385:1.11605,1.11605:0.00272634,0.394995,0.602354
-chr1	5593742	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5593777;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.971211:18,18:17-18,17-18:16,12,0,11:17,3|18,13:4,1|5,1|7,1|9,1|11,1|12,1|13,2|14,1|15,1|17,1:276.968:326.675,113.385:0.323567,0.323567:7.60834e-14,0.0281487,0.971905
-chr1	5594362	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594409;RU=acagatatcagc;PERIOD=12;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993895:4,4:4-4,4-4:11,12,0,6:4,11:3,6:194.69:326.675,113.385:0.0,0.0:1.35695e-13,0.00487052,0.995139
-chr1	5594483	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594518;RU=acagatatcagc;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99893:3,3:3-3,3-3:13,11,0,3:3,13:2,2|3,1:171.44:326.675,113.385:0.0,0.0:2.17272e-24,0.000780489,0.999225
-chr1	5601522	.	CTCTCTCTCTCTCTCT	.	.	.	END=5601537;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.859694:8,8:6-8,6-8:7,2,0,0:8,7:NULL:47.0547:326.675,113.385:0.81164,0.81164:3.07523e-11,0.0813469,0.918751
-chr1	5601538	.	CACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=5601571;RU=ca;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.226687:15,15:15-17,15-17:2,4,0,4:15,2:4,1|8,1|10,1|14,1:74.861:326.675,113.385:0.733609,0.733609:0.596184,0.403375,0.000510556
-chr1	5605789	.	TATATATATATA	.	.	.	END=5605800;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.680517:6,6:6-7,6-7:5,5,0,0:6,5:NULL:67.2546:326.675,113.385:0.491073,0.491073:1.41842e-09,0.179353,0.820711
-chr1	5607518	.	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	.	.	END=5607567;RU=ccctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0418975:6,6:6-9,6-9:0,3,0,0:NULL:NULL:28.9:326.675,113.385:1.35727,1.35727:0.366524,0.478544,0.154989
-chr1	5609483	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=5609534;RU=tctt;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.820827:12,13:8-13,13-13:9,13,0,13:12,2|13,7:4,1|5,1|6,3|7,3|9,1|10,3|12,1:260.367:326.675,113.385:1.75429,0.0:1.0024e-14,0.823073,0.176996
-chr1	5609614	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5609639;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.542862:13,13:11-13,11-13:4,12,0,4:13,4:7,2|9,1|11,1:160.209:326.675,113.385:0.497617,0.497617:1.63911e-05,0.276384,0.723601
-chr1	5612315	.	CTGGCTGGCTGG	.	.	.	END=5612326;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.940243:3,3:3-3,3-3:7,15,0,0:3,7:NULL:175.706:326.675,113.385:0.0,0.0:7.17578e-23,0.0445383,0.955537
-chr1	5612776	.	TTTATTTATTTA	.	.	.	END=5612787;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999421:3,3:3-3,3-3:14,4,0,0:3,14:NULL:91.4822:326.675,113.385:0.0,0.0:5.724e-42,0.000277712,0.999727
-chr1	5614359	.	TCCCTCCCTCCCTCCC	.	.	.	END=5614374;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999522:4,4:4-4,4-4:15,13,0,0:4,15:NULL:179.777:326.675,113.385:0.0,0.0:0.0,0.000362995,0.999637
-chr1	5616757	.	AAGCAAGCAAGC	.	.	.	END=5616768;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999902:3,3:3-3,3-3:16,8,0,2:3,16:2,2:151.309:326.675,113.385:0.0,0.0:0.0,4.69939e-05,0.999956
-chr1	5617140	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5617189;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.343833:25,25:24-26,24-26:11,6,0,9:24,3|25,6|26,2:7,1|9,1|11,1|15,1|17,1|18,1|19,1|20,1|23,1:192.044:326.675,113.385:0.713833,0.713833:5.2481e-07,0.146591,0.853494
-chr1	5617615	.	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	.	.	END=5617699;RU=ttctc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0362275:20,20:16-20,16-20:0,1,0,7:NULL:4,1|6,1|10,1|13,1|15,1|16,2:57.8107:326.675,113.385:1.3165,1.3165:0.059034,0.378311,0.562803
-chr1	5618977	.	CAGCAGCAGCAG	.	.	.	END=5618988;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:4,4:4-4,4-4:20,11,0,0:4,20:NULL:187.212:326.675,113.385:0.0,0.0:0.0,1.45056e-05,0.999987
-chr1	5620595	.	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5620640;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.370281:23,23:22-24,22-24:6,4,0,12:22,2|23,4:6,1|7,2|11,1|12,1|18,1|19,1|20,1|21,1|22,3:165.941:326.675,113.385:0.722976,0.722976:0.000106707,0.555466,0.444532
-chr1	5623551	.	TTATTTTATTTTATT	.	.	.	END=5623565;RU=ttatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999475:3,3:3-3,3-3:14,5,0,2:3,14:2,2:115.762:326.675,113.385:0.0,0.0:1e-44,0.000232575,0.999772
-chr1	5625250	.	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=5625297;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.576253:24,24:23-24,23-24:22,19,0,11:23,7|24,15:7,1|8,1|10,1|12,1|16,1|20,1|21,2|22,2|23,1:376.926:326.675,113.385:0.452422,0.452422:2.10056e-11,0.4238,0.576288
-chr1	5626755	.	TATATATATATATA	.	.	.	END=5626768;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.951073:7,7:7-7,7-7:8,3,0,0:7,8:NULL:57.6703:326.675,113.385:0.0,0.0:2.05221e-11,0.0266218,0.973432
-chr1	5627434	.	ACCCACCCACCC	.	.	.	END=5627445;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981742:3,3:3-3,3-3:9,4,0,0:3,9:NULL:71.9961:326.675,113.385:0.0,0.0:7.77127e-24,0.00726744,0.992752
-chr1	5628800	.	GTGTGTGTGTGT	.	.	.	END=5628811;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999816:6,6:6-6,6-6:16,16,0,0:6,16:NULL:198.309:326.675,113.385:0.0,0.0:1.65706e-33,0.000107345,0.999895
-chr1	5634536	.	ACATACATACAT	.	.	.	END=5634547;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999689:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.811:326.675,113.385:0.0,0.0:3.2e-44,0.000172858,0.999827
-chr1	5645300	.	CCACCCACCCACCCAC	.	.	.	END=5645315;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987727:4,4:4-4,4-4:10,10,0,0:4,10:NULL:132.37:326.675,113.385:0.0,0.0:1.37064e-33,0.00887219,0.991149
-chr1	5648208	.	TTTCTTTCTTTC	.	.	.	END=5648219;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998321:3,3:3-3,3-3:13,6,0,0:3,13:NULL:107.261:326.675,113.385:0.0,0.0:4.6e-44,0.00108233,0.998922
-chr1	5658059	.	AACCAACCAACCAACCAACCAACCAACCAACC	.	.	.	END=5658090;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995541:8,8:8-8,8-8:11,4,0,7:8,11:3,2|6,2|7,3:134.487:326.675,113.385:0.0,0.0:2.63941e-34,0.0014174,0.998587
-chr1	5659996	.	ACACACACACACAC	.	.	.	END=5660009;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:23,7,0,2:7,23:5,1|6,1:172.037:326.675,113.385:0.0,0.0:0.0,5.81845e-07,1.0
-chr1	5667369	.	TTGTTTTGTTTTGTT	.	.	.	END=5667383;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991355:3,3:3-3,3-3:10,9,0,0:3,10:NULL:123.116:326.675,113.385:0.0,0.0:3.09465e-33,0.00534692,0.994664
-chr1	5668188	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=5668233;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.878676:23,23:22-23,22-23:7,12,0,9:23,7:8,1|12,2|15,2|16,2|17,1|20,1:213.066:326.675,113.385:0.298675,0.298675:7.90049e-11,0.0683182,0.931775
-chr1	5668714	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=5668747;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.937667:17,17:17-18,17-18:21,12,0,12:17,18|18,3:6,1|7,1|8,2|10,2|12,1|13,1|15,3|16,1:308.257:326.675,113.385:0.334882,0.334882:4.03709e-26,5.38759e-06,0.999995
-chr1	5683487	.	CAAACAAACAAACAAA	.	.	.	END=5683502;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999211:4,4:3-4,3-4:13,15,0,3:4,13:3,3:210.706:326.675,113.385:0.40582,0.40582:2.35e-43,0.000417593,0.999584
-chr1	5686946	.	ACTCCACTCCACTCCACTCCACTCC	.	.	.	END=5686970;RU=actcc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,11,0,4:5,21:3,2|4,2:214.731:326.675,113.385:0.0,0.0:0.0,1.48824e-06,1.0
-chr1	5691957	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5691994;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.774457:18,19:16-19,19-19:6,7,0,11:18,2|19,4:6,2|7,1|8,1|9,2|10,1|13,1|17,1|18,2:184.123:326.675,113.385:1.0388,0.139319:1.04829e-05,0.781348,0.218685
-chr1	5702366	.	GGGTGGGTGGGT	.	.	.	END=5702377;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.952356:3,3:3-3,3-3:7,30,0,2:3,7:2,2:314.196:326.675,113.385:0.0,0.0:6.10428e-21,0.0250173,0.975031
-chr1	5703039	.	TTTCTTTCTTTC	.	.	.	END=5703050;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999954:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.288:326.675,113.385:0.0,0.0:0.0,1.64207e-05,0.999986
-chr1	5703348	.	TCTCTCTCTCTC	.	.	.	END=5703359;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999944:6,6:6-6,6-6:17,15,0,2:6,17:5,1|6,1:213.761:326.675,113.385:0.0,0.0:4.966e-42,1.96654e-05,0.99998
-chr1	5705129	.	TTTATTTATTTA	.	.	.	END=5705140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:18,9,0,2:3,18:2,2:172.875:326.675,113.385:0.0,0.0:0.0,1.42805e-05,0.999987
-chr1	5705229	.	CCCACCCACCCA	.	.	.	END=5705240;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.539:326.675,113.385:0.0,0.0:0.0,2.42264e-06,1.0
-chr1	5706741	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5706764;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99992:6,6:5-6,5-6:17,8,0,3:6,17:3,2|5,1:162.246:326.675,113.385:0.236383,0.236383:0.0,4.85328e-05,0.999955
-chr1	5708798	.	TTTATTTATTTA	.	.	.	END=5708809;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.191:326.675,113.385:0.0,0.0:0.0,5.58044e-06,0.999995
-chr1	5709925	.	TTCTTTCTTTCT	.	.	.	END=5709936;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:224.239:326.675,113.385:0.0,0.0:0.0,9.42141e-08,1.0
-chr1	5710226	.	TTGTTTTGTTTTGTTTTGTT	.	.	.	END=5710245;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,19,0,5:4,23:2,1|3,4:301.264:326.675,113.385:0.0,0.0:0.0,4.63585e-07,1.0
-chr1	5712340	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=5712369;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997542:6,6:6-6,6-6:12,6,0,3:6,12:2,1|3,1|5,1:124.805:326.675,113.385:0.0,0.0:2.80473e-30,0.00135867,0.998648
-chr1	5718275	.	TTTATTTATTTA	.	.	.	END=5718286;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.25:326.675,113.385:0.0,0.0:0.0,2.59941e-06,1.0
-chr1	5722194	.	TATATATATATA	.	.	.	END=5722205;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.936977:6,6:5-7,5-7:8,2,0,0:6,8:NULL:48.6909:326.675,113.385:0.651813,0.651813:1.33637e-13,0.034441,0.965621
-chr1	5722249	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5722268;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995876:4,4:4-4,4-4:11,5,0,2:4,11:3,2:99.6182:326.675,113.385:0.0,0.0:5.11647e-38,0.0017386,0.998268
-chr1	5727994	.	ATACATACATAC	.	.	.	END=5728005;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.919973:3,3:3-3,3-3:7,5,0,0:3,7:NULL:75.9551:326.675,113.385:0.0,0.0:7.27925e-25,0.0435556,0.956519
-chr1	5733779	.	ACCCACCCACCC	.	.	.	END=5733790;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930157:3,3:3-3,3-3:7,15,0,0:3,7:NULL:161.446:326.675,113.385:0.0,0.0:3.30203e-21,0.0487605,0.951318
-chr1	5742710	.	GGGTGGGTGGGT	.	.	.	END=5742721;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.958695:3,3:3-3,3-3:7,33,0,2:3,7:2,2:337.752:326.675,113.385:0.0,0.0:8.78633e-22,0.0259419,0.974111
-chr1	5743415	.	TTTATTTATTTA	.	.	.	END=5743426;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,14,0,0:3,27:NULL:231.169:326.675,113.385:0.0,0.0:0.0,4.34196e-08,1.0
-chr1	5743494	.	CCCACCCACCCACCCA	.	.	.	END=5743509;RU=ccca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997609:4,4:4-4,4-4:12,23,0,3:4,12:2,1|3,2:280.913:326.675,113.385:0.0,0.0:5.76151e-36,0.00168956,0.998315
-chr1	5749087	.	CTCTTGCTCTTGCTCTTG	.	.	.	END=5749104;RU=ctcttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:211.324:326.675,113.385:0.0,0.0:0.0,2.97405e-08,1.0
-chr1	5759909	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5759948;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.96388:20,20:18-21,18-21:13,9,0,7:18,2|20,11:9,1|10,1|11,2|18,1|19,1|20,1:200.219:326.675,113.385:0.49505,0.49505:7.4202e-20,0.0325171,0.967542
-chr1	5762305	.	AGAGAGAGAGAGAGAG	.	.	.	END=5762320;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999964:8,8:8-8,8-8:18,13,0,2:8,18:5,1|6,1:200.676:326.675,113.385:0.0,0.0:6.50713e-37,2.77855e-05,0.999972
-chr1	5769922	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=5769941;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:5,5:5-5,5-5:16,10,0,4:5,16:4,4:189.343:326.675,113.385:0.0,0.0:0.0,3.41362e-05,0.99997
-chr1	5772735	.	AAATAAATAAATAAAT	.	.	.	END=5772750;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999846:4,4:4-4,4-4:17,11,0,0:4,17:NULL:171.988:326.675,113.385:0.0,0.0:0.0,0.000125561,0.999879
-chr1	5773613	.	GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	GGAGGGGAGGGGAGGGGAGGGGAGG	.	.	END=5773672;RU=ggagg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0502929:5,5:4-6,4-6:0,2,0,5:NULL:3,2|4,2|5,1:52.5778:326.675,113.385:0.782491,0.782491:1.0,0.0,0.0
-chr1	5774929	.	AAAATAAAATAAAATAAAATAAAATAAAATAAAAT	.	.	.	END=5774963;RU=aaaat;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999866:7,7:6-7,6-7:16,9,0,6:7,16:3,2|4,2|5,2:193.838:326.675,113.385:0.311527,0.311527:6.10738e-38,9.78369e-05,0.999903
-chr1	5775613	.	AAACAAACAAACAAAC	.	.	.	END=5775628;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,16,0,5:4,21:3,5:266.998:326.675,113.385:0.0,0.0:0.0,1.32175e-06,1.0
-chr1	5779912	.	AATAATAATAATAAT	.	.	.	END=5779926;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.738405:5,5:5-5,5-5:5,10,0,0:5,5:NULL:112.525:326.675,113.385:0.29703,0.29703:1.91527e-11,0.178554,0.821514
-chr1	5780434	.	CATTGTGAGCATTGTGAGCATTGTGAG	.	.	.	END=5780460;RU=cattgtgag;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999569:3,3:3-3,3-3:15,11,0,0:3,15:NULL:167.59:326.675,113.385:0.0,0.0:0.0,0.000368101,0.999636
-chr1	5781296	.	TTATTATTATTA	.	.	.	END=5781307;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:20,8,0,2:4,20:3,2:164.757:326.675,113.385:0.0,0.0:0.0,3.46079e-06,1.0
-chr1	5783455	.	GTGGGTGGGTGG	GTGGGTGGGTGGGTGGGTGGGTGGGTGG	.	.	END=5783466;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:1.0:3,7:3-3,7-7:24,23,0,0:3,18|7,6:NULL:317.768:326.675,113.385:0.0,0.557277:0.0,2.32863e-16,1.0
-chr1	5785041	.	TAAATAAATAAA	.	.	.	END=5785052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:132.735:326.675,113.385:0.0,0.0:0.0,9.0504e-06,0.999994
-chr1	5785417	.	TTATTTATTTAT	.	.	.	END=5785428;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:296.537:326.675,113.385:0.0,0.0:0.0,1.65893e-09,1.0
-chr1	5791745	.	CACACACACACACA	.	.	.	END=5791758;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:6-7,6-7:43,18,0,6:6,3|7,38|8,2:6,6:405.178:326.675,113.385:0.195027,0.195027:0.0,6.50369e-07,1.0
-chr1	5793084	.	AATAAATAAATA	.	.	.	END=5793095;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:160.328:326.675,113.385:0.0,0.0:0.0,1.96478e-07,1.0
-chr1	5795883	.	TAAATAAATAAA	.	.	.	END=5795894;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.643:326.675,113.385:0.0,0.0:0.0,8.64019e-08,1.0
-chr1	5796091	.	TTTGTTTTGTTTTGT	.	.	.	END=5796105;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,8,0,0:3,30:NULL:194.535:326.675,113.385:0.0,0.0:0.0,4.90667e-09,1.0
-chr1	5796722	.	AATAAATAAATA	.	.	.	END=5796733;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:2-3,2-3:18,14,0,0:3,18:NULL:203.111:326.675,113.385:0.35561,0.35561:0.0,1.86871e-05,0.999985
-chr1	5797431	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5797454;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:23,6,0,5:6,23:4,3|5,2:186.325:326.675,113.385:0.410384,0.410384:0.0,4.34187e-07,1.0
-chr1	5799311	.	TATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATA	.	.	END=5799348;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.982163:17,19:6-19,6-19:9,2,0,0:17,4|19,5:NULL:65.3645:326.675,113.385:4.72276,4.99312:1.88777e-05,0.990785,0.00921863
-chr1	5799404	.	TAAATAAATAAA	.	.	.	END=5799415;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998939:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.1688:326.675,113.385:0.0,0.0:1.8887e-37,0.000540242,0.999462
-chr1	5800120	.	TTATTATTATTATTA	.	.	.	END=5800134;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99239:5,5:5-5,5-5:11,11,0,0:5,11:NULL:145.145:326.675,113.385:0.0,0.0:9.87934e-32,0.00529762,0.994716
-chr1	5803800	.	CAACAACAACAACAA	.	.	.	END=5803814;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,8,0,5:5,24:4,5:208.194:326.675,113.385:0.0,0.0:0.0,1.5221e-07,1.0
-chr1	5813834	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=5813884;RU=tct;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.94456:16,17:16-17,17-17:12,23,0,10:16,3|17,9:4,1|7,1|9,1|10,1|11,2|13,1|14,1|15,1|16,1:356.573:326.675,113.385:0.469019,0.0:1.41439e-15,0.94468,0.0554052
-chr1	5813889	.	TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	.	.	END=5813933;RU=ttctt;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.610104:9,12:9-9,11-13:9,22,0,20:9,9:3,2|4,2|5,1|6,4|7,3|8,5|11,2|12,1:399.269:326.675,113.385:0.0,0.613702:1e-45,9.28955e-22,1.0
-chr1	5819521	.	AAACAAACAAACAAACAAAC	.	.	.	END=5819540;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999981:5,5:5-5,5-5:18,15,0,7:5,18:2,1|3,4|4,2:261.639:326.675,113.385:0.0,0.0:0.0,1.39299e-05,0.999987
-chr1	5829633	.	TTCCTTCCTTCC	.	.	.	END=5829644;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:244.365:326.675,113.385:0.0,0.0:0.0,5.32516e-08,1.0
-chr1	5831560	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	.	END=5831615;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998937:14,14:9-15,9-15:13,13,0,15:14,13:4,1|5,1|8,3|9,3|11,1|12,1|13,5:282.937:326.675,113.385:1.39944,1.39944:8.61859e-31,0.000348108,0.999652
-chr1	5832533	.	AACAAACAAACA	.	.	.	END=5832544;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997564:3,3:3-3,3-3:13,21,0,0:3,13:NULL:243.631:326.675,113.385:0.0,0.0:2.98e-43,0.00208502,0.99792
-chr1	5833064	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=5833091;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:23,16,0,10:7,23:3,2|4,2|5,2|6,4:319.451:326.675,113.385:0.0,0.0:0.0,4.69348e-07,1.0
-chr1	5836792	.	TTTTGTTTTGTTTTG	.	.	.	END=5836806;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,4,0,2:3,28:2,1|3,1:161.592:326.675,113.385:0.0,0.0:0.0,8.26137e-09,1.0
-chr1	5843531	.	GTTGTTGTTGTT	.	.	.	END=5843542;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999906:4,4:4-4,4-4:17,11,0,0:4,17:NULL:166.827:326.675,113.385:0.0,0.0:1.1e-43,6.42646e-05,0.99994
-chr1	5844583	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5844632;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.348451:25,25:23-25,23-25:8,10,0,15:24,3|25,5:5,1|6,1|11,2|12,2|13,1|14,1|16,1|18,1|20,3|23,1|24,1:254.626:326.675,113.385:0.561658,0.561658:6.94529e-05,0.630722,0.369266
-chr1	5861282	.	ATATATATATAT	.	.	.	END=5861293;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999911:6,6:6-6,6-6:17,6,0,0:6,17:NULL:118.354:326.675,113.385:0.0,0.0:2.05423e-27,5.61991e-05,0.999947
-chr1	5863544	.	GGGTGGGTGGGT	.	.	.	END=5863555;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.849824:3,3:3-3,3-3:6,28,0,2:3,6:2,2:289.551:326.675,113.385:0.278639,0.278639:8.24928e-16,0.0757857,0.924308
-chr1	5864371	.	ATTAATTAATTA	.	.	.	END=5864382;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:3,3:3-3,3-3:18,8,0,0:3,18:NULL:146.274:326.675,113.385:0.0,0.0:0.0,1.68976e-05,0.999986
-chr1	5865370	.	TCTCTCTCTCTCTC	.	.	.	END=5865383;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-8,7-8:20,8,0,4:7,20:4,1|5,3:182.858:326.675,113.385:0.253975,0.253975:7.068e-42,5.16475e-06,0.999995
-chr1	5868012	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=5868059;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.848199:24,24:22-24,22-24:7,13,0,16:24,7:7,1|9,1|10,1|13,2|14,2|15,3|16,1|21,1|22,1|23,2|24,1:283.199:326.675,113.385:0.467344,0.467344:4.72747e-16,0.0181405,0.9819
-chr1	5871062	.	TATTTTATTTTATTT	.	.	.	END=5871076;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999792:3,3:3-3,3-3:15,15,0,2:3,15:2,2:213.109:326.675,113.385:0.0,0.0:3e-45,0.000128777,0.999873
-chr1	5877999	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=5878042;RU=gata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.999836:10,10:10-10,10-10:16,15,0,6:10,16:5,1|7,2|8,1|9,2:251.085:326.675,113.385:0.0,0.0:0.999909,9.38047e-05,6.43078e-23
-chr1	5882501	.	TAAATAAATAAA	.	.	.	END=5882512;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,10,0,0:3,36:NULL:229.319:326.675,113.385:0.0,0.0:0.0,1.04705e-10,1.0
-chr1	5887687	.	AGAATAGAATAGAAT	.	.	.	END=5887701;RU=agaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:220.324:326.675,113.385:0.0,0.0:0.0,6.13223e-09,1.0
-chr1	5889757	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=5889788;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995842:16,16:16-17,16-17:26,18,0,25:16,23|17,3:5,1|6,1|7,2|8,1|9,2|10,1|11,4|12,3|13,3|14,4|15,3:487.37:326.675,113.385:0.284901,0.284901:5.44931e-31,2.91005e-07,1.0
-chr1	5890307	.	ACAAAACAAAACAAA	.	.	.	END=5890321;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:227.577:326.675,113.385:0.0,0.0:0.0,2.32011e-06,1.0
-chr1	5896268	.	TAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=5896295;RU=taga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,14,0,4:7,22:3,1|4,1|5,1|6,1:252.308:326.675,113.385:0.0,0.0:2.80159e-28,3.30435e-06,1.0
-chr1	5896295	.	AGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	.	END=5896330;RU=agac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999706:9,9:9-9,9-9:15,15,0,8:9,15:5,2|6,1|7,3|8,2:261.206:326.675,113.385:0.0,0.0:1.00938e-31,0.000138485,0.999864
-chr1	5897769	.	ATATATATATAT	.	.	.	END=5897780;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99999:6,6:6-6,6-6:32,15,0,0:6,29|7,3:NULL:275.497:326.675,113.385:0.0990099,0.0990099:3.05501e-34,1.71758e-08,1.0
-chr1	5897783	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5897826;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.97549:22,22:19-23,19-23:16,22,0,25:22,14|23,2:5,2|6,1|7,3|9,2|10,4|11,3|12,2|13,3|14,2|19,2|21,1:474.739:326.675,113.385:0.657354,0.657354:1.16935e-16,0.000428123,0.999575
-chr1	5897969	.	ACACACACACACACACAC	.	.	.	END=5897986;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.944427:9,9:7-19,7-19:29,17,0,8:8,3|9,26:6,4|7,2|8,1|16,1:361.609:326.675,113.385:3.5902,3.5902:1.1e-44,5.74913e-05,0.999942
-chr1	5898251	.	TTGTTGTTGTTG	.	.	.	END=5898262;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:178.491:326.675,113.385:0.0,0.0:0.0,1.01053e-05,0.999993
-chr1	5899946	.	CATACATACATACATACATACATACATACATACATACATA	.	.	.	END=5899985;RU=cata;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999909:10,10:10-10,10-10:17,13,0,12:10,17:3,1|4,1|5,2|6,1|7,3|8,3|9,1:279.428:326.675,113.385:0.0990099,0.0990099:2.73826e-25,4.24703e-05,0.999957
-chr1	5899987	.	GTATGTATGTAT	.	.	.	END=5899998;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,10,0,0:3,19:NULL:170.457:326.675,113.385:0.0,0.0:0.0,1.08231e-05,0.999993
-chr1	5902689	.	CACACACACACACACACACACACACACACA	.	.	.	END=5902718;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997902:15,15:13-15,13-15:20,14,0,13:13,2|15,18:4,2|6,1|7,1|8,1|11,2|12,2|13,3|14,1:318.723:326.675,113.385:0.833449,0.833449:1.42274e-22,0.00208513,0.99792
-chr1	5903515	.	TGTTTTGTTTTGTTT	.	.	.	END=5903529;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999876:3,3:3-3,3-3:16,4,0,0:3,16:NULL:103.791:326.675,113.385:0.0,0.0:0.0,6.71815e-05,0.999934
-chr1	5907759	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5907810;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.942176:25,26:24-26,25-26:7,26,0,24:25,4|26,3:4,1|5,2|6,1|7,3|8,1|10,1|11,1|12,2|13,2|16,1|19,2|20,1|22,1|23,1|24,1|25,3:460.169:326.675,113.385:0.314035,0.429525:0.0225164,0.950009,0.02757
-chr1	5912141	.	TAAATAAATAAA	.	.	.	END=5912152;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:314.115:326.675,113.385:0.0,0.0:0.0,1.17494e-10,1.0
-chr1	5915677	.	CACCACCACCACCAC	.	.	.	END=5915691;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:75,14,0,5:5,75:4,5:454.381:326.675,113.385:0.0,0.0:0.0,8.44432e-23,1.0
-chr1	5915768	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=5915801;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999597:17,17:17-22,17-22:41,25,0,17:16,7|17,30|18,4:4,2|8,1|9,2|10,2|12,1|13,3|14,3|16,2|22,1:583.029:326.675,113.385:2.24099,2.24099:5.98141e-35,8.34372e-06,0.999994
-chr1	5918994	.	CCCTCCCTCCCT	.	.	.	END=5919005;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999354:3,3:3-3,3-3:14,7,0,0:3,14:NULL:117.558:326.675,113.385:0.0,0.0:1e-45,0.00039642,0.999606
-chr1	5919625	.	ATATATATATAT	.	.	.	END=5919636;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999622:6,6:6-7,6-7:15,13,0,0:6,15:NULL:171.564:326.675,113.385:0.195027,0.195027:5.98538e-26,0.000235845,0.999766
-chr1	5919950	.	GATGATGATGAT	.	.	.	END=5919961;RU=gat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:196.784:326.675,113.385:0.0,0.0:0.0,8.43741e-07,1.0
-chr1	5922252	.	ATATATATATATATATATATATATATAT	.	.	.	END=5922279;RU=at;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.620937:14,14:13-15,13-15:5,10,0,0:14,5:NULL:114.364:326.675,113.385:0.421694,0.421694:0.000215381,0.241347,0.758457
-chr1	5926025	.	TCTTTCTTTCTT	.	.	.	END=5926036;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:3,3:3-3,3-3:18,10,0,3:3,18:2,3:188.06:326.675,113.385:0.0,0.0:0.0,1.04438e-05,0.999993
-chr1	5927629	.	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	.	.	.	END=5927700;RU=gatgaa;PERIOD=6;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.844477:12,12:9-12,9-12:6,27,0,19:12,6:2,2|3,3|4,2|5,2|6,1|7,1|8,1|9,4|11,3:411.108:326.675,113.385:0.619742,0.619742:7.03679e-18,0.137528,0.862561
-chr1	5927964	.	ACCCACCCACCC	.	.	.	END=5927975;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.966:326.675,113.385:0.0,0.0:0.0,6.46021e-06,0.999995
-chr1	5929823	.	TTTGTTTGTTTG	.	.	.	END=5929834;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999841:3,3:3-3,3-3:16,2,0,2:3,16:2,2:98.7639:326.675,113.385:0.0,0.0:0.0,6.37898e-05,0.99994
-chr1	5930224	.	GTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=5930247;RU=gtt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:27,13,0,5:8,27:3,1|5,4:263.401:326.675,113.385:0.19802,0.19802:0.0,9.0939e-08,1.0
-chr1	5934390	.	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	.	.	.	END=5934474;RU=tttcc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.199924:17,17:14-17,14-17:2,11,0,11:17,2:3,1|4,2|6,1|9,2|10,3|12,1|13,1:185.373:326.675,113.385:1.49816,1.49816:8.06284e-05,0.626446,0.373523
-chr1	5940366	.	AATTAATTAATT	.	.	.	END=5940377;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999916:3,3:3-3,3-3:17,8,0,0:3,17:NULL:143.032:326.675,113.385:0.0,0.0:0.0,5.15884e-05,0.999949
-chr1	5940451	.	TTTGTTTTGTTTTGT	.	.	.	END=5940465;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:215.504:326.675,113.385:0.0,0.0:0.0,1.34636e-06,1.0
-chr1	5941150	.	ACACACACACAC	.	.	.	END=5941161;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,20,0,3:6,20:4,1|5,2:278.91:326.675,113.385:0.0,0.0:5.56e-43,3.98785e-06,0.999995
-chr1	5942017	.	ACAAAACAAAACAAA	.	.	.	END=5942031;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999954:3,3:3-3,3-3:17,1,0,2:3,17:2,1|3,1:90.8318:326.675,113.385:0.0,0.0:0.0,1.14842e-05,0.999988
-chr1	5945567	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5945590;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,18,0,5:6,22:3,1|4,1|5,3:292.462:326.675,113.385:0.0,0.0:0.0,9.82135e-07,1.0
-chr1	5946795	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5946832;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991405:19,19:4-21,4-21:14,19,0,9:18,2|19,12:5,1|6,1|7,1|8,1|9,1|10,1|12,1|17,1|19,1:315.022:326.675,113.385:7.29921,7.29921:2.95628e-20,0.00747542,0.992543
-chr1	5947011	.	TCCATCCATCCA	.	.	.	END=5947022;RU=tcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,11,0,0:3,31:NULL:223.229:326.675,113.385:0.0,0.0:0.0,2.78806e-09,1.0
-chr1	5953047	.	TCATTCATTCATTCAT	.	.	.	END=5953062;RU=tcat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,12,0,2:4,22:3,2:214.53:326.675,113.385:0.0,0.0:0.0,1.25837e-06,1.0
-chr1	5953771	.	ATTTTATTTTATTTT	.	.	.	END=5953785;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,17,0,2:3,22:2,2:259.852:326.675,113.385:0.0,0.0:0.0,1.55559e-06,1.0
-chr1	5956109	.	AGAGAGAGAGAG	.	.	.	END=5956120;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:19,14,0,2:6,19:4,1|5,1:211.292:326.675,113.385:0.699966,0.699966:1.1e-44,1.05018e-05,0.999993
-chr1	5956842	.	TTCTTTCTTTCT	.	.	.	END=5956853;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:236.194:326.675,113.385:0.0,0.0:0.0,2.68644e-06,1.0
-chr1	5958262	.	GAAGGAAGGAAGGAAGGAAG	.	.	.	END=5958281;RU=gaag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:27,16,0,4:5,27:2,1|4,3:283.017:326.675,113.385:0.0,0.0:0.0,4.85953e-08,1.0
-chr1	5963266	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=5963305;RU=gttt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:24,12,0,17:10,24:3,1|4,2|5,3|6,1|8,5|9,5:336.913:326.675,113.385:0.0,0.0:0.0,2.83696e-07,1.0
-chr1	5964606	.	ATATATATATATAT	.	.	.	END=5964619;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.836108:7,7:4-7,4-7:14,10,0,0:6,3|7,11:NULL:160.179:326.675,113.385:0.862467,0.862467:2.47795e-12,0.162866,0.837207
-chr1	5964620	.	ACACACACACACACACACACAC	.	.	.	END=5964641;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.445205:11,11:9-11,9-11:12,14,0,6:10,3|11,9:4,1|5,1|6,1|9,2|10,1:234.396:326.675,113.385:0.708457,0.708457:2.48055e-09,0.553166,0.44694
-chr1	5969864	.	CCACCCACCCACCCAC	.	.	.	END=5969879;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:33,22,0,2:4,33:3,2:343.641:326.675,113.385:0.0,0.0:0.0,6.62047e-10,1.0
-chr1	5971172	.	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=5971195;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99981:6,6:5-6,5-6:28,17,0,4:5,2|6,26:2,1|3,1|4,1|5,1:310.005:326.675,113.385:0.298675,0.298675:0.0,0.000194253,0.99981
-chr1	5973006	.	ACACACACACAC	.	.	.	END=5973017;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983031:6,6:6-6,6-6:9,6,0,3:6,9:5,3:112.405:326.675,113.385:0.0,0.0:3.2648e-20,0.00572335,0.994293
-chr1	5974638	.	AAATAAATAAAT	.	.	.	END=5974649;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.736692:3,3:1-3,1-3:5,17,0,0:3,5:NULL:171.101:326.675,113.385:0.507951,0.507951:1.13701e-16,0.20747,0.792576
-chr1	5974827	.	ATAATAATAATAATAATA	.	.	.	END=5974844;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996343:6,6:6-6,6-6:11,8,0,4:6,11:3,1|4,2|5,1:152.714:326.675,113.385:0.0,0.0:3.15835e-24,0.00184095,0.998163
-chr1	5974849	.	AAATTAAATTAAATTAAATT	.	.	.	END=5974868;RU=aaatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.964528:4,4:4-4,4-4:8,11,0,2:4,8:2,2:149.833:326.675,113.385:0.19802,0.19802:4.66856e-25,0.0264723,0.973578
-chr1	5976547	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5976566;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993463:4,4:4-4,4-4:10,10,0,2:4,10:3,2:140.83:326.675,113.385:0.0,0.0:3.90347e-33,0.00345787,0.99655
-chr1	5978570	.	AAAGAAAGAAAG	.	.	.	END=5978581;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:187.058:326.675,113.385:0.0,0.0:0.0,1.19858e-08,1.0
-chr1	5981538	.	ATAATAATAATA	.	.	.	END=5981549;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9988:4,4:4-4,4-4:13,11,0,0:4,13:NULL:148.367:326.675,113.385:0.0,0.0:2.02401e-34,0.000860891,0.999142
-chr1	5990630	.	TGGATTATCTGGATTATCTGGATTATC	.	.	.	END=5990656;RU=tggattatc;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,16,0,4:3,22:2,4:261.29:326.675,113.385:0.0,0.0:0.0,2.32205e-06,1.0
-chr1	5990673	.	ACACACACACAC	.	.	.	END=5990684;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,13,0,3:6,20:4,1|5,2:222.117:326.675,113.385:0.0,0.0:1.71735e-39,4.97916e-06,0.999995
-chr1	5991174	.	AAAACAAAACAAAAC	.	.	.	END=5991188;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.705:326.675,113.385:0.0,0.0:0.0,9.51013e-06,0.999993
-chr1	5999275	.	GGGTGGGTGGGT	.	.	.	END=5999286;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.932367:3,3:3-3,3-3:7,44,0,2:3,7:2,2:430.394:326.675,113.385:0.278639,0.278639:6.02717e-20,0.0580408,0.942047
-chr1	6002341	.	AAATAAATAAAT	.	.	.	END=6002352;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990347:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6385:326.675,113.385:0.0,0.0:9.0193e-33,0.00438464,0.995628
-chr1	6003957	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6003980;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993524:6,6:6-6,6-6:11,5,0,0:6,11:NULL:89.6854:326.675,113.385:0.0,0.0:5.95831e-34,0.00386801,0.996142
-chr1	6007179	.	TGTGTGTGTGTGTG	.	.	.	END=6007192;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:7,7:7-7,7-7:19,4,0,0:7,19:NULL:113.025:326.675,113.385:0.0,0.0:2.37576e-35,1.83346e-05,0.999985
-chr1	6008813	.	CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=6008864;RU=ca;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.550003:26,26:25-26,25-26:5,10,0,8:26,5:6,1|7,1|8,1|11,3|13,1|16,1:179.894:326.675,113.385:0.35561,0.35561:3.90968e-06,0.288238,0.711762
-chr1	6010711	.	ATTTATTTATTT	.	.	.	END=6010722;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999907:3,3:3-3,3-3:16,4,0,0:3,16:NULL:100.387:326.675,113.385:0.0,0.0:0.0,5.41553e-05,0.999948
-chr1	6016751	.	CATACATACATA	.	.	.	END=6016762;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999492:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.222:326.675,113.385:0.0,0.0:0.0,0.000290229,0.999712
-chr1	6022355	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6022386;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:24,21,0,12:8,24:3,6|4,1|5,2|6,2|7,1:372.745:326.675,113.385:0.0990099,0.0990099:0.0,5.46256e-07,1.0
-chr1	6023295	.	TTATTTATTTATTTATTTATTTATTTAT	.	.	.	END=6023322;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995703:7,7:7-7,7-7:11,11,0,6:7,11:2,2|3,2|5,1|6,1:183.374:326.675,113.385:0.0,0.0:5.7497e-34,0.00238712,0.997618
-chr1	6023967	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=6023984;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999955:3,3:3-3,3-3:18,18,0,0:3,18:NULL:235.55:326.675,113.385:0.0,0.0:0.0,5.44966e-05,0.999948
-chr1	6025872	.	TTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=6025899;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961678:7,7:7-7,7-7:8,5,0,2:7,8:3,1|6,1:92.9615:326.675,113.385:0.0,0.0:1.86636e-19,0.0193302,0.980711
-chr1	6025930	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6025961;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.66936:15,16:15-17,16-16:10,1,0,4:15,3|16,7:5,1|11,1|13,1|14,1:90.1498:326.675,113.385:0.59653,0.139319:1.76427e-06,0.672544,0.327468
-chr1	6033005	.	TAAATAAATAAA	.	.	.	END=6033016;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999932:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.95:326.675,113.385:0.0,0.0:0.0,3.9076e-05,0.999963
-chr1	6033244	.	ATACATACATACATACATACATACATACATACATAC	.	.	.	END=6033279;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.906221:9,9:9-9,9-9:7,8,0,3:9,7:3,1|4,1|7,1:124.6:326.675,113.385:0.29703,0.29703:3.74206e-17,0.0603248,0.939766
-chr1	6033357	.	ATATATATATATATAT	.	.	.	END=6033372;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987169:8,8:8-8,8-8:10,4,0,0:8,10:NULL:77.138:326.675,113.385:0.0,0.0:2.36841e-16,0.00686831,0.99315
-chr1	6034894	.	GGCAGGCAGGCAGGCA	.	.	.	END=6034909;RU=ggca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.967518:4,4:4-4,4-4:8,9,0,2:4,8:3,2:131.181:326.675,113.385:0.0,0.0:2.16302e-26,0.0180274,0.98201
-chr1	6041090	.	AAAATAAAATAAAAT	.	.	.	END=6041104;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:317.917:326.675,113.385:0.0,0.0:0.0,1.53151e-08,1.0
-chr1	6041134	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6041161;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:28,16,0,8:7,28:2,2|3,3|5,1|6,2:317.829:326.675,113.385:0.278639,0.278639:0.0,3.35055e-08,1.0
-chr1	6041922	.	TTGGTTTGGTTTGGTTTGGT	.	.	.	END=6041941;RU=ttggt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,10,0,5:4,19:2,4|3,1:200.289:326.675,113.385:0.0,0.0:0.0,7.07621e-06,0.999994
-chr1	6041960	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=6041977;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,4,0,0:3,23:NULL:128.968:326.675,113.385:0.0,0.0:0.0,5.73006e-07,1.0
-chr1	6042004	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	.	END=6042038;RU=tttgt;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:19,8,0,7:7,19:2,1|3,1|4,2|5,1|6,1|7,1:201.051:326.675,113.385:0.0,0.0:0.0,4.35751e-06,0.999995
-chr1	6048614	.	AAACAAACAAAC	.	.	.	END=6048625;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:154.817:326.675,113.385:0.0,0.0:0.0,2.35957e-05,0.999979
-chr1	6051144	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=6051171;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-8,7-8:26,7,0,6:7,26:4,1|6,5:217.953:326.675,113.385:0.21692,0.21692:0.0,3.26809e-08,1.0
-chr1	6056382	.	CCTCCTCCTCCTCCT	.	.	.	END=6056396;RU=cct;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98372:5,5:5-5,5-5:10,17,0,0:5,10:NULL:192.524:326.675,113.385:0.0,0.0:3.52835e-29,0.0132492,0.986779
-chr1	6056414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6056441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997307:7,7:7-7,7-7:11,14,0,13:7,11:3,3|4,1|5,3|6,6:268.22:326.675,113.385:0.0,0.0:5.31752e-33,0.00134459,0.998662
-chr1	6059464	.	AAAAACAAAAACAAAAAC	.	.	.	END=6059481;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,16,0,0:3,28:NULL:260.005:326.675,113.385:0.0,0.0:0.0,5.9262e-08,1.0
-chr1	6059973	.	AAATAAATAAAT	.	.	.	END=6059984;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.651:326.675,113.385:0.0,0.0:0.0,1.0502e-05,0.999993
-chr1	6061243	.	AGAGAGAGAGAG	.	.	.	END=6061254;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:26,14,0,3:6,26:5,3:249.986:326.675,113.385:0.339533,0.339533:0.0,6.44112e-08,1.0
-chr1	6062647	.	GTGGGTGGGTGG	.	.	.	END=6062658;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997682:3,3:3-3,3-3:12,23,0,0:3,12:NULL:249.551:326.675,113.385:0.0,0.0:5.23451e-40,0.00149923,0.998505
-chr1	6062751	.	TAAATAAATAAA	.	.	.	END=6062762;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997745:3,3:3-3,3-3:12,4,0,0:3,12:NULL:82.2321:326.675,113.385:0.0,0.0:9.1662e-41,0.00103777,0.998967
-chr1	6066036	.	CTCTGTCTCTGTCTCTGT	.	.	.	END=6066053;RU=ctctgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.554:326.675,113.385:0.0,0.0:0.0,2.05396e-07,1.0
-chr1	6072915	.	AATAATAATAATAATAATAATAATAATAATAATAATAAT	.	.	.	END=6072953;RU=aat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930029:13,13:12-14,12-14:8,9,0,5:13,8:4,1|5,1|6,2|7,1:152.319:326.675,113.385:0.53502,0.53502:5.64677e-12,0.0433137,0.956757
-chr1	6077184	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=6077227;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.755053:22,22:18-22,18-22:6,5,0,8:22,6:6,1|14,2|15,1|17,2|18,1|21,1:133.559:326.675,113.385:1.92222,1.92222:5.48777e-09,0.0867559,0.913343
-chr1	6080857	.	AAACAAACAAACAAACAAAC	.	.	.	END=6080876;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976075:5,5:5-5,5-5:8,5,0,8:5,8:2,1|3,2|4,5:135.037:326.675,113.385:0.0,0.0:7.29175e-27,0.00865998,0.991359
-chr1	6083873	.	AATAAATAAATA	.	.	.	END=6083884;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994711:3,3:3-3,3-3:10,16,0,2:3,10:2,1|3,1:207.602:326.675,113.385:0.0,0.0:3.33485e-40,0.00209673,0.997912
-chr1	6084220	.	ATTTATTTATTT	.	.	.	END=6084231;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998322:3,3:3-3,3-3:13,6,0,0:3,13:NULL:109.814:326.675,113.385:0.0,0.0:1.01883e-32,0.000871197,0.999134
-chr1	6085465	.	TAATAATAATAATAA	.	.	.	END=6085479;RU=taa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996344:5,5:5-5,5-5:12,6,0,0:5,12:NULL:103.466:326.675,113.385:0.0,0.0:8.40892e-32,0.00230582,0.997701
-chr1	6085756	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6085801;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.811173:23,23:23-23,23-23:6,13,0,10:23,6:5,1|8,2|10,1|11,2|14,1|19,1|22,2:226.27:326.675,113.385:0.0,0.0:6.11263e-08,0.0622423,0.937851
-chr1	6086268	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=6086299;RU=tc;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.86262:16,16:16-16,16-16:6,6,0,5:16,6:4,1|5,1|14,1|15,1|16,1:123.14:326.675,113.385:0.0,0.0:4.58227e-17,0.0297807,0.970274
-chr1	6087008	.	TATTTATTTATT	.	.	.	END=6087019;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999661:3,3:3-3,3-3:15,3,0,0:3,15:NULL:85.7931:326.675,113.385:0.0,0.0:0.0,0.000154233,0.999849
-chr1	6092499	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6092524;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999858:13,13:13-13,13-13:17,10,0,6:13,17:6,1|7,1|10,2|11,1|13,1:210.266:326.675,113.385:0.19802,0.19802:4.57521e-30,4.70373e-05,0.999955
-chr1	6093013	.	CACACACACACACA	.	.	.	END=6093026;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.421024:7,7:5-7,5-7:3,9,0,2:7,3:5,2:109.583:326.675,113.385:0.575281,0.575281:6.83108e-05,0.324228,0.675718
-chr1	6098593	.	CTAGAACTAGAACTAGAA	.	.	.	END=6098610;RU=ctagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999799:3,3:3-3,3-3:15,8,0,2:3,15:2,2:146.151:326.675,113.385:0.0,0.0:0.0,9.13691e-05,0.99991
-chr1	6099223	.	TTGGTTGGTTGG	.	.	.	END=6099234;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999602:3,3:1-3,1-3:15,15,0,0:3,15:NULL:196.668:326.675,113.385:0.913899,0.913899:0.0,0.000276285,0.999727
-chr1	6099488	.	CCCACCCACCCA	.	.	.	END=6099499;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,13,0,0:3,18:NULL:188.538:326.675,113.385:0.0,0.0:0.0,2.42689e-05,0.999978
-chr1	6099665	.	TTGTTTGTTTGTTTGTTTGTTTGT	.	.	.	END=6099688;RU=ttgt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,16,0,5:6,23:2,1|3,2|4,1|5,1:276.875:326.675,113.385:0.0,0.0:0.0,1.05494e-06,1.0
-chr1	6102505	.	CAACAACAACAA	.	.	.	END=6102516;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999977:4,4:4-4,4-4:18,18,0,0:4,18:NULL:228.586:326.675,113.385:0.0,0.0:0.0,3.11281e-05,0.999971
-chr1	6107421	.	AAATAAATAAAT	.	.	.	END=6107432;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.826:326.675,113.385:0.0,0.0:0.0,4.03319e-06,0.999995
-chr1	6108219	.	CACACACACACACACACACACACACACACACACACACA	.	.	.	END=6108256;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993249:19,19:19-20,19-20:25,18,0,18:17,2|19,20|20,3:4,2|5,3|7,1|8,1|9,1|10,1|11,3|13,1|14,2|15,2|18,1:429.764:326.675,113.385:0.29703,0.29703:1.847e-21,6.9518e-05,0.999933
-chr1	6108461	.	AGAGAGAGAGAGAGAG	.	.	.	END=6108476;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99941:8,8:8-8,8-8:15,10,0,0:8,15:NULL:150.292:326.675,113.385:0.139319,0.139319:3.98759e-33,0.000372694,0.999629
-chr1	6109390	.	CACCCACCCACC	.	.	.	END=6109401;RU=cacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:2-3,2-3:24,13,0,0:3,24:NULL:212.488:326.675,113.385:0.298675,0.298675:0.0,4.71475e-07,1.0
-chr1	6109799	.	AAATAAATAAAT	.	.	.	END=6109810;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.156:326.675,113.385:0.0,0.0:0.0,1.66408e-07,1.0
-chr1	6109840	.	CAACAACAACAA	.	.	.	END=6109851;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:156.084:326.675,113.385:0.0,0.0:0.0,7.19318e-06,0.999994
-chr1	6110101	.	AAATAAATAAAT	.	.	.	END=6110112;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999394:3,3:3-3,3-3:14,5,0,0:3,14:NULL:97.881:326.675,113.385:0.0,0.0:8.52e-43,0.000282072,0.99972
-chr1	6114158	.	AATAAATAAATA	.	.	.	END=6114169;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.767742:3,3:3-3,3-3:5,7,0,0:3,5:NULL:81.3956:326.675,113.385:0.0,0.0:3.77461e-12,0.127857,0.872242
-chr1	6118166	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6118197;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98645:16,16:16-17,16-17:10,9,0,12:16,10:5,1|6,2|9,1|10,3|12,1|13,1|14,3:227.308:326.675,113.385:0.345543,0.345543:5.24999e-15,0.00639446,0.993618
-chr1	6118512	.	TTCAATTCAATTCAATTCAA	.	.	.	END=6118531;RU=ttcaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99998:4,4:4-4,4-4:18,9,0,4:4,18:3,4:184.02:326.675,113.385:0.0,0.0:0.0,1.38592e-05,0.999987
-chr1	6122082	.	AAAACAAAACAAAAC	.	.	.	END=6122096;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:207.671:326.675,113.385:0.0,0.0:0.0,1.27218e-05,0.999987
-chr1	6124347	.	TAAATAAATAAATAAATAAA	.	.	.	END=6124366;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,5,0,0:5,22:NULL:138.504:326.675,113.385:0.0,0.0:0.0,1.54925e-06,1.0
-chr1	6126323	.	AATCAATCAATCAATCAATCAATCAATCAATC	.	.	.	END=6126354;RU=aatc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999059:8,8:8-8,8-8:13,5,0,7:8,13:2,1|4,1|5,1|6,2|7,2:152.492:326.675,113.385:0.0,0.0:1.43201e-31,0.000422655,0.999582
-chr1	6130083	.	AAATCAAATCAAATC	.	.	.	END=6130097;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999472:3,3:3-3,3-3:14,9,0,0:3,14:NULL:144.783:326.675,113.385:0.0,0.0:0.0,0.000341248,0.99966
-chr1	6131636	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=6131675;RU=atag;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984166:10,10:10-10,10-10:9,8,0,8:10,9:2,1|4,1|5,1|7,1|8,1|9,3:173.745:326.675,113.385:0.0,0.0:5.2531e-22,0.00554703,0.994467
-chr1	6132801	.	TTGGTTGGTTGGTTGG	.	.	.	END=6132816;RU=ttgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:4,4:4-4,4-4:18,14,0,5:4,18:2,1|3,4:230.985:326.675,113.385:0.0,0.0:0.0,1.08062e-05,0.999993
-chr1	6133624	.	AAATAAATAAAT	.	.	.	END=6133635;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994882:3,3:3-3,3-3:11,5,0,0:3,11:NULL:92.3692:326.675,113.385:0.0,0.0:1.38372e-34,0.002219,0.99779
-chr1	6134579	.	AAATAAAATAAAATA	.	.	.	END=6134593;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:177.07:326.675,113.385:0.0,0.0:0.0,4.22136e-06,0.999995
-chr1	6134731	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=6134782;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.429794:26,26:25-26,25-26:6,18,0,9:25,2|26,4:5,1|6,1|7,1|11,1|12,1|15,1|21,1|26,2:270.245:326.675,113.385:0.472558,0.472558:8.09277e-19,0.522431,0.47766
-chr1	6136631	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=6136660;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.636075:15,15:14-16,14-16:25,16,0,7:13,2|14,6|15,14|16,3:5,1|6,1|8,1|11,1|14,3:338.333:326.675,113.385:0.673122,0.673122:3.52494e-13,0.351759,0.648281
-chr1	6137129	.	TATTATTATTAT	.	.	.	END=6137140;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999578:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.607:326.675,113.385:0.0,0.0:1.757e-41,0.000238084,0.999765
-chr1	6137380	.	TTGTTTGTTTGT	.	.	.	END=6137391;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:183.108:326.675,113.385:0.0,0.0:0.0,8.06194e-09,1.0
-chr1	6137986	.	TGCATGCATGCA	.	.	.	END=6137997;RU=tgca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994469:3,3:3-3,3-3:11,7,0,0:3,11:NULL:116.139:326.675,113.385:0.0,0.0:7.27824e-38,0.00322665,0.996784
-chr1	6142183	.	AAACAAACAAACAAAC	.	.	.	END=6142198;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:23,17,0,2:4,23:3,2:263.53:326.675,113.385:0.0,0.0:0.0,9.19229e-07,1.0
-chr1	6144901	.	GAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=6144922;RU=ga;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999973:11,11:11-11,11-11:25,13,0,4:10,2|11,23:6,1|7,1|10,2:261.614:326.675,113.385:0.0,0.0:1.5765e-36,3.36838e-05,0.99997
-chr1	6153283	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=6153306;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999981:6,6:6-6,6-6:18,5,0,2:6,18:4,1|5,1:133.222:326.675,113.385:0.0,0.0:0.0,1.21902e-05,0.999987
-chr1	6153696	.	AACTAACTAACT	.	.	.	END=6153707;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989695:3,3:3-3,3-3:10,4,0,0:3,10:NULL:76.5681:326.675,113.385:0.0,0.0:1.32747e-32,0.00489523,0.995116
-chr1	6156105	.	GGTGGTGGTGGT	.	.	.	END=6156116;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:245.438:326.675,113.385:0.0,0.0:0.0,4.38061e-08,1.0
-chr1	6156235	.	AAACAAACAAACAAACAAAC	.	.	.	END=6156254;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.947843:5,5:5-5,5-5:9,18,0,0:5,9:NULL:205.243:326.675,113.385:0.0,0.0:1.78488e-25,0.0429236,0.957147
-chr1	6157851	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=6157890;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.752279:20,20:17-20,17-20:12,9,0,5:17,2|20,10:4,1|10,1|11,1|17,1|20,1:183.179:326.675,113.385:1.30783,1.30783:1.61306e-21,0.24328,0.756734
-chr1	6158692	.	AGCAGCAGCAGC	.	.	.	END=6158703;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,19,0,0:4,26:NULL:279.647:326.675,113.385:0.0,0.0:0.0,1.50567e-07,1.0
-chr1	6158961	.	GTGGTGGTGGTG	.	.	.	END=6158972;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,21,0,2:4,30:3,2:321.545:326.675,113.385:0.0,0.0:0.0,4.70615e-09,1.0
-chr1	6160096	.	TACATACATACA	.	.	.	END=6160107;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:231.279:326.675,113.385:0.0,0.0:0.0,9.43314e-08,1.0
-chr1	6160598	.	AATAAATAAATA	.	.	.	END=6160609;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:225.602:326.675,113.385:0.0,0.0:0.0,3.47456e-07,1.0
-chr1	6162049	.	CCACCACCACCA	.	.	.	END=6162060;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:177.09:326.675,113.385:0.0,0.0:0.0,7.64484e-06,0.999994
-chr1	6163104	.	TTTGTTTGTTTG	.	.	.	END=6163115;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:262.632:326.675,113.385:0.0,0.0:0.0,2.08384e-07,1.0
-chr1	6178405	.	ATAAAATAAAATAAA	.	.	.	END=6178419;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:229.543:326.675,113.385:0.0,0.0:0.0,4.18841e-07,1.0
-chr1	6178663	.	GACCTGACCTGACCT	.	.	.	END=6178677;RU=gacct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,6,0,3:3,25:2,3:175.922:326.675,113.385:0.0,0.0:0.0,1.12569e-07,1.0
-chr1	6180765	.	TAAATAAATAAA	.	.	.	END=6180776;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.936818:3,3:3-3,3-3:7,5,0,2:3,7:2,2:84.2429:326.675,113.385:0.0,0.0:5.72889e-23,0.0212536,0.978789
-chr1	6188010	.	TTTAATTTAATTTAA	.	.	.	END=6188024;RU=tttaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999711:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.999:326.675,113.385:0.0,0.0:0.0,0.000179156,0.999825
-chr1	6190661	.	AAATAAATAAAT	.	.	.	END=6190672;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:19,15,0,0:3,19:NULL:211.052:326.675,113.385:0.0,0.0:0.0,1.27372e-05,0.999987
-chr1	6191823	.	AACAAACAAACA	.	.	.	END=6191834;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999944:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.552:326.675,113.385:0.0,0.0:0.0,3.98189e-05,0.999963
-chr1	6193268	.	CAACAACAACAACAA	.	.	.	END=6193282;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:5,5:5-5,5-5:18,13,0,3:5,18:4,3:208.346:326.675,113.385:0.0,0.0:0.0,1.1307e-05,0.999993
-chr1	6194222	.	AACAAAAACAAAAACAAAAACAAA	.	.	.	END=6194245;RU=aacaaa;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:24,8,0,7:4,24:2,1|3,6:217.741:326.675,113.385:0.253975,0.253975:0.0,1.443e-07,1.0
-chr1	6196714	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6196751;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.816281:19,19:18-19,18-19:9,5,0,5:18,2|19,7:6,2|15,2|17,1:128.555:326.675,113.385:0.311527,0.311527:3.19036e-07,0.158704,0.84137
-chr1	6197125	.	GTTTGTTTGTTTGTTT	.	.	.	END=6197140;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,14,0,6:4,20:2,1|3,5:244.8:326.675,113.385:0.0,0.0:2.10572e-29,4.70157e-06,0.999995
-chr1	6197608	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6197647;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.965823:20,20:19-20,19-20:13,18,0,17:19,2|20,11:5,3|9,2|10,2|11,2|12,1|15,1|16,1|18,3|19,2:365.533:326.675,113.385:0.236383,0.236383:1.13737e-10,0.0318096,0.968249
-chr1	6197805	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=6197822;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,18,0,0:3,39:NULL:320.576:326.675,113.385:0.0,0.0:0.0,1.62659e-11,1.0
-chr1	6198434	.	CACACACACACACA	.	.	.	END=6198447;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:25,5,0,0:7,25:NULL:144.648:326.675,113.385:0.0,0.0:3e-45,2.28277e-07,1.0
-chr1	6199733	.	TTATTTATTTAT	.	.	.	END=6199744;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,17,0,3:3,22:2,3:268.516:326.675,113.385:0.0,0.0:0.0,8.0634e-07,1.0
-chr1	6203219	.	AAACAAACAAAC	.	.	.	END=6203230;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:183.432:326.675,113.385:0.0,0.0:0.0,2.854e-06,1.0
-chr1	6207701	.	GTTTGTTTGTTT	.	.	.	END=6207712;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.425:326.675,113.385:0.0,0.0:0.0,8.11456e-07,1.0
-chr1	6208513	.	GTTGTTGTTGTT	.	.	.	END=6208524;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:151.135:326.675,113.385:0.0,0.0:0.0,9.37241e-06,0.999993
-chr1	6208671	.	TTATTTTTATTTTTATTT	.	.	.	END=6208688;RU=ttattt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99963:3,3:3-3,3-3:14,10,0,2:3,14:2,1|3,1:162.315:326.675,113.385:0.0,0.0:0.0,0.000182714,0.999819
-chr1	6210401	.	TTTGTTTGTTTG	.	.	.	END=6210412;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998483:3,3:3-3,3-3:12,5,0,3:3,12:2,3:116.13:326.675,113.385:0.0,0.0:8.19467e-38,0.000558929,0.999445
-chr1	6219473	.	GTTTGTTTGTTTGTTT	.	.	.	END=6219488;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,17,0,0:4,21:NULL:254.168:326.675,113.385:0.0,0.0:0.0,7.24935e-06,0.999994
-chr1	6219491	.	ATTTATTTATTT	.	.	.	END=6219502;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,17,0,3:3,25:2,3:289.229:326.675,113.385:0.0,0.0:0.0,1.11238e-07,1.0
-chr1	6224070	.	GTGTGTGTGTGT	.	.	.	END=6224081;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,10,0,2:6,21:5,2:185.081:326.675,113.385:0.0,0.0:0.0,1.72515e-06,1.0
-chr1	6226500	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6226537;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997486:19,19:18-19,18-19:24,9,0,7:18,5|19,19:6,1|9,1|12,1|13,1|14,1|15,1|18,1:259.282:326.675,113.385:0.5093,0.5093:7.5948e-22,0.00251275,0.997495
-chr1	6226712	.	TTTGTTTGTTTGTTTG	.	.	.	END=6226727;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,16,0,5:4,24:2,1|3,4:275.322:326.675,113.385:0.0,0.0:0.0,1.73189e-07,1.0
-chr1	6227414	.	TTGTTTGTTTGT	.	.	.	END=6227425;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:212.816:326.675,113.385:0.0,0.0:0.0,4.12816e-06,0.999995
-chr1	6228918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6228955;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.323881:19,19:19-22,19-22:3,6,0,11:19,3:4,1|6,3|11,2|15,2|16,1|18,2:155.522:326.675,113.385:1.40014,1.40014:0.000263973,0.159522,0.840288
-chr1	6229792	.	CAAAACAAAACAAAACAAAACAAAA	.	.	.	END=6229816;RU=caaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959818:5,5:5-5,5-5:8,6,0,2:5,8:2,1|3,1:100.318:326.675,113.385:0.0,0.0:1.16675e-24,0.0229229,0.977121
-chr1	6231061	.	GTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6231082;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999295:11,11:9-12,9-12:22,10,0,6:11,20|12,2:5,1|6,2|9,1|10,2:232.667:326.675,113.385:0.410145,0.410145:5.22495e-29,2.21999e-06,1.0
-chr1	6232825	.	TTTGTTTGTTTG	.	.	.	END=6232836;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.983:326.675,113.385:0.0,0.0:0.0,7.29909e-07,1.0
-chr1	6232863	.	TTTGTTTGTTTG	.	.	.	END=6232874;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,8,0,3:3,22:2,3:182.425:326.675,113.385:0.0,0.0:0.0,7.23581e-07,1.0
-chr1	6232977	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=6232994;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:200.399:326.675,113.385:0.0,0.0:0.0,7.36549e-07,1.0
-chr1	6233703	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6233722;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995233:4,4:4-4,4-4:11,11,0,3:4,11:2,1|3,2:169.752:326.675,113.385:0.0,0.0:3.18555e-30,0.00296114,0.997048
-chr1	6236385	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6236434;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.477729:25,25:24-25,24-25:7,14,0,10:24,2|25,5:7,1|9,1|10,1|11,2|16,1|19,2|23,1|24,1:242.309:326.675,113.385:0.452422,0.452422:2.07637e-05,0.478374,0.521694
-chr1	6238596	.	ATTATTATTATT	.	.	.	END=6238607;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999393:4,4:4-4,4-4:15,14,0,0:4,15:NULL:194.976:326.675,113.385:0.0,0.0:2.88657e-37,0.000419021,0.999583
-chr1	6239066	.	TTTGTTTGTTTG	.	.	.	END=6239077;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999785:3,3:3-3,3-3:15,11,0,3:3,15:2,3:182.834:326.675,113.385:0.0,0.0:1.56924e-40,0.00010514,0.999896
-chr1	6240390	.	GTGCGTGCGTGC	.	.	.	END=6240401;RU=gtgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:173.043:326.675,113.385:0.0,0.0:0.0,6.06587e-06,0.999994
-chr1	6247906	.	TGTTGTTGTTGTTGT	.	.	.	END=6247920;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:24,11,0,2:5,24:3,1|4,1:216.699:326.675,113.385:0.236383,0.236383:0.0,4.22916e-07,1.0
-chr1	6250708	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=6250725;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999563:6,6:6-6,6-6:15,9,0,2:6,15:3,1|5,1:161.233:326.675,113.385:0.0,0.0:1.7459e-41,0.000263725,0.999736
-chr1	6250858	.	TATGTATGTATGTATG	.	.	.	END=6250873;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994009:4,4:3-4,3-4:21,9,0,2:3,2|4,19:3,2:192.209:326.675,113.385:0.419363,0.419363:0.0,0.00601312,0.994001
-chr1	6251852	.	AAATAAATAAAT	.	.	.	END=6251863;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.405:326.675,113.385:0.0,0.0:0.0,6.98634e-05,0.999933
-chr1	6252245	.	ATATATATATATATAT	ATATATATAT	.	.	END=6252260;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0176847:5,5:5-9,5-9:0,5,0,0:NULL:NULL:43.6947:326.675,113.385:1.38875,1.38875:0.375284,0.481424,0.14336
-chr1	6252276	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATAT	.	.	END=6252315;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0197936:17,17:1-17,1-17:0,4,0,3:NULL:5,1|8,1|17,1:59.9756:326.675,113.385:5.72911,5.72911:0.76738,0.225041,0.00762246
-chr1	6260354	.	TAAATAAATAAA	.	.	.	END=6260365;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.565:326.675,113.385:0.0,0.0:0.0,1.0302e-05,0.999993
-chr1	6266174	.	TTGTTTTGTTTTGTTTTGTTTTGTT	.	.	.	END=6266198;RU=ttgtt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999863:5,5:5-5,5-5:16,9,0,4:5,16:3,4:176.745:326.675,113.385:0.0,0.0:5.2806e-34,0.00010021,0.999902
-chr1	6267793	.	TGTTTGTTTGTT	.	.	.	END=6267804;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.408:326.675,113.385:0.0,0.0:0.0,2.42279e-06,1.0
-chr1	6269522	.	GTTGTTGTTGTT	.	.	.	END=6269533;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,15,0,2:4,22:3,2:240.943:326.675,113.385:0.0,0.0:0.0,1.42327e-06,1.0
-chr1	6269576	.	GATAGGATAGGATAG	.	.	.	END=6269590;RU=gatag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:218.717:326.675,113.385:0.0,0.0:0.0,7.19534e-08,1.0
-chr1	6271401	.	TCATCATCATCA	.	.	.	END=6271412;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:121.848:326.675,113.385:0.0,0.0:0.0,7.85478e-06,0.999994
-chr1	6273501	.	TTCATTCATTCA	.	.	.	END=6273512;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999431:3,3:3-3,3-3:14,5,0,0:3,14:NULL:101.03:326.675,113.385:0.0,0.0:7.8e-44,0.000273069,0.999728
-chr1	6273618	.	ACCCACCCACCC	.	.	.	END=6273629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989861:3,3:3-3,3-3:10,11,0,0:3,10:NULL:134.88:326.675,113.385:0.0,0.0:7.59975e-27,0.00483192,0.995182
-chr1	6274375	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=6274394;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,7,0,4:5,26:3,1|4,3:196.057:326.675,113.385:0.0,0.0:0.0,4.63645e-08,1.0
-chr1	6276992	.	ATGATGATGATG	.	.	.	END=6277003;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,11,0,0:4,22:NULL:185.686:326.675,113.385:0.0,0.0:0.0,2.22016e-06,1.0
-chr1	6277038	.	AGCAGCAGCAGC	.	.	.	END=6277049;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:23,10,0,0:4,23:NULL:184.665:326.675,113.385:0.0,0.0:0.0,1.51151e-06,1.0
-chr1	6285646	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6285691;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.742702:23,23:22-24,22-24:14,13,0,20:22,3|23,9|24,2:5,2|6,1|7,1|8,1|9,1|12,1|14,1|15,3|16,1|17,3|18,1|21,1|22,1|23,2:352.699:326.675,113.385:0.561134,0.561134:1.89285e-24,0.0129286,0.987098
-chr1	6290853	.	TCCTTCCTTCCT	.	.	.	END=6290864;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,20,0,0:3,32:NULL:317.715:326.675,113.385:0.0,0.0:0.0,4.87576e-09,1.0
-chr1	6293821	.	CTCCCTCCCTCC	.	.	.	END=6293832;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:218.038:326.675,113.385:0.0,0.0:0.0,9.94156e-08,1.0
-chr1	6301879	.	AATAAATAAATA	.	.	.	END=6301890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,17,0,2:3,23:2,2:261.177:326.675,113.385:0.0,0.0:0.0,3.68189e-07,1.0
-chr1	6303590	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6303631;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.873441:21,23:21-21,20-23:14,13,0,24:20,3|21,9|22,2:4,1|5,1|6,2|7,1|8,1|9,3|10,1|11,2|13,1|15,3|16,2|18,1|19,1|20,3|23,1:393.598:326.675,113.385:0.0990099,1.0187:1.21109e-14,2.029e-06,1.0
-chr1	6311549	.	GGTGGTGGTGGT	.	.	.	END=6311560;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999576:4,4:4-4,4-4:15,10,0,0:4,15:NULL:155.49:326.675,113.385:0.0,0.0:0.0,0.000278707,0.999721
-chr1	6312247	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	.	END=6312294;RU=tccc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.519107:12,12:11-12,11-12:4,6,0,5:12,4:3,1|4,2|8,1|10,1:109.704:326.675,113.385:0.486863,0.486863:3.2532e-09,0.268059,0.731941
-chr1	6312789	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=6312844;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.233564:28,28:25-29,25-29:2,11,0,12:28,2:6,1|7,1|8,1|12,1|13,1|14,1|19,1|21,2|26,1|27,1|28,1:211.077:326.675,113.385:1.44649,1.44649:1.4493e-10,0.228072,0.771956
-chr1	6317256	.	AAAAACAAAAACAAAAAC	.	.	.	END=6317273;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,7,0,0:3,29:NULL:180.098:326.675,113.385:0.0,0.0:0.0,1.09115e-08,1.0
-chr1	6324793	.	TTATTTATTTAT	.	.	.	END=6324804;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999899:3,3:3-3,3-3:16,5,0,3:3,16:2,3:131.718:326.675,113.385:0.0,0.0:0.0,3.49466e-05,0.999964
-chr1	6326106	.	CTGCTGCTGCTG	.	.	.	END=6326117;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999879:4,4:4-4,4-4:17,15,0,0:4,17:NULL:206.579:326.675,113.385:0.0,0.0:0.0,9.01237e-05,0.999911
-chr1	6328025	.	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	.	.	.	END=6328108;RU=tccctc;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.276711:14,14:11-14,11-14:2,7,0,10:14,2:2,1|4,1|5,1|6,1|7,2|9,1|10,1|12,1|13,1:148.089:326.675,113.385:0.927845,0.927845:0.00346715,0.435722,0.560919
-chr1	6329503	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6329524;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.355466:11,11:10-11,10-11:20,21,0,7:10,5|11,15:4,1|6,1|8,2|10,2|11,1:344.554:326.675,113.385:0.516562,0.516562:1.06726e-25,0.644578,0.355461
-chr1	6330314	.	TGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6330337;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999663:12,12:12-12,12-12:16,15,0,4:12,16:7,2|11,2:241.719:326.675,113.385:0.0,0.0:9.40051e-21,0.000149188,0.99985
-chr1	6332594	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=6332633;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999945:8,8:8-8,8-8:17,12,0,10:8,17:3,2|4,1|5,3|6,2|7,2:256.922:326.675,113.385:0.0,0.0:0.0,3.51892e-05,0.999964
-chr1	6332921	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=6332940;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:20,7,0,4:4,20:3,4:174.049:326.675,113.385:0.0,0.0:0.0,2.65643e-06,1.0
-chr1	6341827	.	TTTATTTATTTATTTATTTA	.	.	.	END=6341846;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997836:5,5:5-5,5-5:12,11,0,8:5,12:3,3|4,5:204.514:326.675,113.385:0.0,0.0:6.80122e-33,0.000836161,0.999166
-chr1	6345062	.	TATTATTATTATTATTATTATTATTATTAT	.	.	.	END=6345091;RU=tat;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.71864:10,10:9-10,9-10:11,7,0,3:9,2|10,9:7,3:136.316:326.675,113.385:0.452422,0.452422:3.92122e-13,0.278474,0.721527
-chr1	6347126	.	ATTTATTTATTT	.	.	.	END=6347137;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-4,3-4:21,8,0,0:3,21:NULL:157.025:326.675,113.385:0.21692,0.21692:0.0,2.56255e-06,1.0
-chr1	6348865	.	TTGTTGTTGTTGTTG	.	.	.	END=6348879;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:27,9,0,5:5,27:4,5:225.486:326.675,113.385:0.0,0.0:0.0,1.41317e-08,1.0
-chr1	6354453	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=6354502;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.614482:25,25:19-25,19-25:8,17,0,10:24,2|25,6:5,2|6,1|7,1|13,1|17,1|19,1|20,2|22,1:280.44:326.675,113.385:2.29536,2.29536:5.97258e-07,0.33895,0.661073
-chr1	6354954	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6354981;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.801285:13,14:13-14,14-14:12,8,0,4:13,4|14,8:7,1|8,2|11,1:159.248:326.675,113.385:0.494455,0.0:1.73115e-09,0.801783,0.198264
-chr1	6355000	.	AGGCAGGCAGGC	.	.	.	END=6355011;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:3,3:3-3,3-3:18,11,0,3:3,18:2,3:190.865:326.675,113.385:0.0,0.0:0.0,1.01497e-05,0.999993
-chr1	6357634	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6357691;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.132999:28,28:17-29,17-29:2,8,0,11:28,2:5,1|10,1|11,1|13,3|15,1|17,1|20,1|21,2:172.541:326.675,113.385:5.3983,5.3983:0.748314,0.241926,0.00978573
-chr1	6359367	.	CTGCTGCTGCTG	.	.	.	END=6359378;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:39,22,0,0:4,39:NULL:362.516:326.675,113.385:0.0,0.0:0.0,4.16911e-11,1.0
-chr1	6368193	.	CATCATCATCAT	.	.	.	END=6368204;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-5,4-5:30,8,0,0:4,30:NULL:188.186:326.675,113.385:0.236383,0.236383:0.0,7.14351e-09,1.0
-chr1	6368347	.	TTTATTTATTTATTTATTTA	.	.	.	END=6368366;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997218:5,5:5-5,5-5:12,18,0,0:5,12:NULL:207.885:326.675,113.385:0.0,0.0:1.13771e-33,0.00223835,0.997768
-chr1	6371007	.	AGGTAGGTAGGT	.	.	.	END=6371018;RU=aggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:259.845:326.675,113.385:0.0,0.0:0.0,1.20261e-07,1.0
-chr1	6371335	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=6371382;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.026833:23,23:21-25,21-25:0,3,0,0:NULL:NULL:31.1618:326.675,113.385:0.859164,0.859164:0.231877,0.505364,0.262804
-chr1	6379206	.	AAACAAACAAAC	.	.	.	END=6379217;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,11,0,0:3,36:NULL:244.338:326.675,113.385:0.0,0.0:0.0,7.01717e-11,1.0
-chr1	6379384	.	TGTTTTGTTTTGTTT	.	.	.	END=6379398;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,7,0,3:3,19:2,3:161.935:326.675,113.385:0.0,0.0:0.0,4.73307e-06,0.999995
-chr1	6386715	.	GCCAGCCAGCCA	.	.	.	END=6386726;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:170.238:326.675,113.385:0.0,0.0:0.0,2.20524e-06,1.0
-chr1	6389231	.	TGAGAATGAGAATGAGAA	.	.	.	END=6389248;RU=tgagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:227.167:326.675,113.385:0.0,0.0:0.0,1.66007e-06,1.0
-chr1	6390202	.	TATATATATATATATATATATA	.	.	.	END=6390223;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.886395:11,11:11-11,11-11:7,4,0,0:11,7:NULL:68.6352:326.675,113.385:0.0,0.0:7.10004e-08,0.0573829,0.942704
-chr1	6390677	.	ACATACATACATACATACATACATACATACAT	.	.	.	END=6390708;RU=acat;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999966:8,8:8-8,8-8:18,16,0,6:8,18:3,2|6,2|7,2:261.855:326.675,113.385:0.0,0.0:2.71797e-36,3.02089e-05,0.999971
-chr1	6391128	.	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG	.	.	.	END=6391159;RU=tctg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998722:8,8:8-8,8-8:13,5,0,6:8,13:2,1|3,3|4,1|6,1:142.657:326.675,113.385:0.0,0.0:3.41302e-38,0.000658743,0.999346
-chr1	6391479	.	CAAACAAACAAA	.	.	.	END=6391490;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:213.709:326.675,113.385:0.0,0.0:0.0,4.31277e-07,1.0
-chr1	6394101	.	AAAACAAAACAAAAC	.	.	.	END=6394115;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,9,0,2:3,18:2,2:166.137:326.675,113.385:0.0,0.0:0.0,1.259e-05,0.999987
-chr1	6403250	.	TGTTTGTTTGTT	.	.	.	END=6403261;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998589:3,3:3-3,3-3:12,8,0,3:3,12:2,3:146.182:326.675,113.385:0.0,0.0:1.93543e-40,0.000508567,0.999493
-chr1	6410410	.	CCACCCCCACCCCCACCC	.	.	.	END=6410427;RU=ccaccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999862:3,3:3-3,3-3:17,20,0,0:3,17:NULL:262.94:326.675,113.385:0.0,0.0:0.0,0.000146166,0.999857
-chr1	6411672	.	CCACCACCACCA	.	.	.	END=6411683;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984921:4,4:4-4,4-4:10,14,0,0:4,10:NULL:168.232:326.675,113.385:0.0,0.0:1.06299e-23,0.0104089,0.989612
-chr1	6412880	.	TATGTATGTATG	.	.	.	END=6412891;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:151.166:326.675,113.385:0.0,0.0:0.0,2.57264e-07,1.0
-chr1	6415172	.	TATATATATATATATATATATA	.	.	.	END=6415193;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.571699:11,11:7-11,7-11:5,3,0,0:11,5:NULL:50.6524:326.675,113.385:1.9881,1.9881:5.17558e-08,0.304474,0.695536
-chr1	6417480	.	AGCTGGAGAAGCTGGAGAAGCTGGAGAAGCTGGAGA	.	.	.	END=6417515;RU=agctggaga;PERIOD=9;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999971:4,4:4-4,4-4:18,22,0,4:4,18:2,1|3,3:299.858:326.675,113.385:0.0,0.0:0.0,3.82692e-05,0.999963
-chr1	6419181	.	TTCCTTTCCTTTCCT	.	.	.	END=6419195;RU=ttcct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:57,12,0,0:3,57:NULL:335.583:326.675,113.385:0.0,0.0:0.0,4.64831e-17,1.0
-chr1	6419368	.	TCTCTTTCTCTTTCTCTTTCTCTT	.	.	.	END=6419391;RU=tctctt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,13,0,6:4,30:3,6:283.516:326.675,113.385:0.0,0.0:0.0,2.87679e-09,1.0
-chr1	6419434	.	CTCCTCCTCCTCCTCCTCCTC	.	.	.	END=6419454;RU=ctc;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997097:7,7:3-7,3-7:13,6,0,0:7,13:NULL:113.007:326.675,113.385:1.92721,1.92721:4.64473e-22,0.00220684,0.997799
-chr1	6424394	.	TTGTTGTTGTTG	.	.	.	END=6424405;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999895:4,4:4-4,4-4:16,8,0,2:4,16:3,2:149.289:326.675,113.385:0.0,0.0:0.0,5.31242e-05,0.999948
-chr1	6427092	.	ATATATATATATATATATATATATAT	.	.	.	END=6427117;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.373616:13,13:9-13,9-13:9,1,0,0:12,3|13,6:NULL:55.0636:326.675,113.385:1.49816,1.49816:5.54377e-05,0.610766,0.389242
-chr1	6427177	.	ATTTATTTATTTATTT	.	.	.	END=6427192;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981664:4,4:4-4,4-4:9,9,0,2:4,9:3,2:132.02:326.675,113.385:0.0,0.0:7.25624e-25,0.00914487,0.990874
-chr1	6441337	.	GCCGCCGCCGCCGCC	.	.	.	END=6441351;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:48,22,0,3:5,48:3,2|4,1:418.21:326.675,113.385:0.0,0.0:0.0,3.65892e-14,1.0
-chr1	6441476	.	GCCGGCCGGCCG	.	.	.	END=6441487;RU=gccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,39,0,8:3,39:2,8:565.491:326.675,113.385:0.0,0.0:0.0,1.5715e-11,1.0
-chr1	6442029	.	AACAACAACAACAACAACAACAACAACAACAACAAC	.	.	.	END=6442064;RU=aac;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:12,12:12-12,12-12:19,17,0,6:12,19:4,1|6,1|10,2|11,2:285.658:326.675,113.385:0.0,0.0:0.0,7.73598e-06,0.999994
-chr1	6442239	.	TAAGATTGTAAGATTGTAAGATTG	.	.	.	END=6442262;RU=taagattg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:253.768:326.675,113.385:0.0,0.0:0.0,2.23496e-07,1.0
-chr1	6443834	.	GTTGGTTGGTTG	.	.	.	END=6443845;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,4,0,0:3,29:NULL:154.01:326.675,113.385:0.0,0.0:0.0,7.97915e-09,1.0
-chr1	6444502	.	CTGCTGCTGCTG	.	.	.	END=6444513;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999896:4,4:4-4,4-4:17,17,0,0:4,17:NULL:221.897:326.675,113.385:0.0,0.0:0.0,8.4194e-05,0.999918
-chr1	6445953	.	TATTTTATTTTATTTTATTTTATTT	.	.	.	END=6445977;RU=tattt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959768:5,5:5-5,5-5:8,5,0,2:5,8:3,1|4,1:94.2959:326.675,113.385:0.0,0.0:1.15631e-17,0.0226392,0.977405
-chr1	6450086	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6450121;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.93274:17,18:17-18,18-18:15,6,0,7:17,6|18,9:4,1|5,1|6,1|7,2|10,1|15,1:190.025:326.675,113.385:0.437216,0.0:1.14586e-09,0.932763,0.0673315
-chr1	6453097	.	TTTGTTTGTTTG	.	.	.	END=6453108;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:174.755:326.675,113.385:0.0,0.0:0.0,1.27653e-06,1.0
-chr1	6454520	.	ATCATCATCATCATC	.	.	.	END=6454534;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:31,16,0,3:5,31:4,3:293.005:326.675,113.385:0.0,0.0:0.0,1.47837e-09,1.0
-chr1	6455399	.	AGAAAAGAAAAGAAA	.	.	.	END=6455413;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997507:3,3:3-3,3-3:12,10,0,0:3,12:NULL:142.479:326.675,113.385:0.0,0.0:1.9739e-40,0.00158037,0.998427
-chr1	6456272	.	ACACACACACACACACACACAC	.	.	.	END=6456293;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:11,11:11-11,11-11:21,21,0,11:11,21:4,1|5,1|6,3|7,1|8,2|9,1|10,2:368.916:326.675,113.385:0.0,0.0:4.12443e-30,4.83856e-06,0.999995
-chr1	6456451	.	GTGGTGGTGGTGGTG	.	.	.	END=6456465;RU=gtg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:38,13,0,5:5,38:4,5:310.504:326.675,113.385:0.0,0.0:0.0,9.48682e-12,1.0
-chr1	6459379	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6459398;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999975:4,4:4-4,4-4:18,5,0,0:4,18:NULL:119.271:326.675,113.385:0.0,0.0:0.0,3.32964e-05,0.99997
-chr1	6461977	.	TTTTCTTTTCTTTTC	.	.	.	END=6461991;RU=ttttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:180.804:326.675,113.385:0.0,0.0:0.0,6.43755e-06,0.999995
-chr1	6467447	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	.	END=6467494;RU=agaa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.718776:12,12:9-12,9-12:6,16,0,5:12,6:3,1|4,2|7,1|10,1:220.248:326.675,113.385:0.574428,0.574428:6.58609e-14,0.254121,0.745886
-chr1	6467698	.	CCCTTCCCTTCCCTT	.	.	.	END=6467712;RU=ccctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:237.557:326.675,113.385:0.0,0.0:0.0,1.90104e-07,1.0
-chr1	6467732	.	TGTGTGTGTGTGTG	.	.	.	END=6467745;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:26,13,0,5:7,26:6,4|7,1:264.22:326.675,113.385:0.0990099,0.0990099:0.0,2.91863e-08,1.0
-chr1	6470121	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6470162;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.984002:21,22:20-21,20-22:16,24,0,31:20,5|21,9|22,2:4,1|5,2|6,2|8,4|9,3|10,1|11,1|13,4|14,2|15,3|16,1|19,3|20,3|22,1:557.227:326.675,113.385:0.390807,0.725277:3.74851e-13,0.00585111,0.994165
-chr1	6474556	.	TTGTTGTTGTTG	.	.	.	END=6474567;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,13,0,2:4,19:3,2:211.583:326.675,113.385:0.0,0.0:0.0,8.20497e-06,0.999994
-chr1	6479132	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6479171;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.701656:20,21:19-20,19-21:11,16,0,9:19,3|20,5|21,3:7,2|8,2|9,1|10,1|15,1|18,1|19,1:281.897:326.675,113.385:0.425627,0.791708:2.93234e-06,0.159303,0.84077
-chr1	6481961	.	AATAAATAAATA	.	.	.	END=6481972;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:3,3:3-3,3-3:16,19,0,0:3,16:NULL:233.09:326.675,113.385:0.0,0.0:0.0,0.000120095,0.999881
-chr1	6485320	.	AATTTAATTTAATTT	.	.	.	END=6485334;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988664:3,3:3-3,3-3:10,9,0,0:3,10:NULL:122.733:326.675,113.385:0.0,0.0:2.01741e-29,0.0065498,0.993466
-chr1	6485835	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6485900;RU=tc;PERIOD=2;REF=33.0;EXPTHRESH=33	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0592474:30,30:29-33,29-33:0,16,0,10:NULL:7,1|8,1|10,1|13,1|20,1|25,2|26,1|27,1|30,1:233.514:326.675,113.385:1.16057,1.16057:0.424781,0.462446,0.112889
-chr1	6486465	.	ATAATAATAATAATAATA	.	.	.	END=6486482;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.848806:6,6:5-7,5-7:14,16,0,0:6,12|7,2:NULL:212.196:326.675,113.385:0.573403,0.573403:4.96e-21,0.00105893,0.998945
-chr1	6486709	.	GAGGTAGAGGTAGAGGTA	.	.	.	END=6486726;RU=gaggta;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,38,0,0:3,26:NULL:437.551:326.675,113.385:0.0,0.0:0.0,3.27061e-07,1.0
-chr1	6489307	.	AACCAACCAACCAACCAACCAACCAACCAACC	.	.	.	END=6489338;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999807:8,8:8-8,8-8:16,14,0,5:8,16:2,1|3,1|4,1|7,2:234.493:326.675,113.385:0.0,0.0:9.71125e-37,0.000126954,0.999873
-chr1	6497659	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6497698;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961433:20,20:18-20,18-20:15,22,0,15:19,3|20,12:4,1|5,1|11,2|12,2|14,1|15,3|16,1|17,1|18,2|19,1:397.666:326.675,113.385:0.694341,0.694341:2.62129e-12,0.0371701,0.962893
-chr1	6507213	.	GGCAGGCAGGCA	.	.	.	END=6507224;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,41,0,6:3,19:2,6:480.663:326.675,113.385:0.0,0.0:0.0,5.54561e-06,0.999995
-chr1	6507332	.	CACACACACACACACA	.	.	.	END=6507347;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.217846:8,8:5-8,5-8:2,27,0,0:8,2:NULL:258.606:326.675,113.385:1.2144,1.2144:0.000712133,0.468084,0.531312
-chr1	6507470	.	GTTGTTGTTGTT	.	.	.	END=6507481;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,9,0,3:4,30:3,3:232.787:326.675,113.385:0.0,0.0:0.0,3.9359e-09,1.0
-chr1	6509128	.	AAGAAAGAAAGA	.	.	.	END=6509139;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:223.052:326.675,113.385:0.0,0.0:0.0,5.27716e-08,1.0
-chr1	6509313	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6509338;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.646039:13,14:13-13,13-14:11,15,0,5:13,11:8,2|9,1|10,1|14,1:229.145:326.675,113.385:0.0,0.484441:2.72351e-19,9.01106e-08,1.0
-chr1	6509599	.	AAAAGAAAAGAAAAG	.	.	.	END=6509613;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999312:3,3:3-3,3-3:14,12,0,0:3,14:NULL:169.371:326.675,113.385:0.0,0.0:0.0,0.000471465,0.99953
-chr1	6513189	.	ACAAGTACAAGTACAAGT	.	.	.	END=6513206;RU=acaagt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.592:326.675,113.385:0.0,0.0:0.0,2.41846e-05,0.999978
-chr1	6519516	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=6519555;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.811379:20,20:19-21,19-21:17,10,0,8:19,4|20,11|21,2:6,1|12,1|14,1|15,1|17,2|18,1|19,1:246.071:326.675,113.385:0.635209,0.635209:2.88909e-13,0.0495004,0.95058
-chr1	6519558	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=6519575;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999881:9,9:9-9,9-9:17,6,0,0:9,17:NULL:122.476:326.675,113.385:0.139319,0.139319:8.45691e-32,6.95839e-05,0.999933
-chr1	6520061	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=6520095;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:20,11,0,8:7,20:2,1|3,3|4,1|5,2|6,1:237.78:326.675,113.385:0.139319,0.139319:0.0,4.5035e-06,0.999995
-chr1	6520115	.	AACCAACCAACC	.	.	.	END=6520126;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.892:326.675,113.385:0.0,0.0:0.0,5.40295e-07,1.0
-chr1	6525229	.	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=6525264;RU=aaac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:19,15,0,7:9,19:3,1|4,2|5,1|6,1|8,2:266.151:326.675,113.385:0.0,0.0:0.0,8.39e-06,0.999994
-chr1	6525468	.	TGTGTGTGTGTGTGTG	.	.	.	END=6525483;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994747:8,8:7-8,7-8:29,10,0,4:7,4|8,25:4,1|5,2|7,1:253.989:326.675,113.385:0.419363,0.419363:4.07905e-40,0.00526366,0.994747
-chr1	6530019	.	AATTAATTAATT	.	.	.	END=6530030;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.932457:3,3:3-3,3-3:7,7,0,0:3,7:NULL:92.1075:326.675,113.385:0.0,0.0:3.16866e-23,0.0352042,0.96486
-chr1	6540303	.	CAAAAACAAAAACAAAAA	.	.	.	END=6540320;RU=caaaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.404:326.675,113.385:0.0,0.0:0.0,1.50693e-06,1.0
-chr1	6542023	.	GTTTTGTTTTGTTTT	.	.	.	END=6542037;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999747:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.451:326.675,113.385:0.0,0.0:0.0,0.000141988,0.999858
-chr1	6542152	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	.	END=6542199;RU=ttcc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996639:12,12:11-12,11-12:12,4,0,4:12,12:6,2|7,1|10,1:118.65:326.675,113.385:0.390807,0.390807:3.18866e-31,0.00190421,0.998102
-chr1	6549122	.	TATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATATATA	.	.	END=6549165;RU=ta;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.028408:1,21:1-23,1-23:0,9,0,2:NULL:17,1|21,1:99.7489:326.675,113.385:8.54168,5.05515:0.263481,0.69884,0.0377403
-chr1	6555095	.	GTTGTTGTTGTT	.	.	.	END=6555106;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,11,0,2:4,30:3,2:230.61:326.675,113.385:0.0,0.0:0.0,4.15857e-09,1.0
-chr1	6557207	.	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	.	.	.	END=6557281;RU=ttc;PERIOD=3;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.676758:25,25:25-25,25-25:5,7,0,16:25,5:3,2|4,1|9,1|10,1|12,1|14,3|15,1|16,1|17,2|20,1|22,1|23,1:208.385:326.675,113.385:0.0,0.0:2.55374e-08,0.150502,0.849579
-chr1	6558796	.	GGGTGGGTGGGT	.	.	.	END=6558807;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982124:3,3:3-3,3-3:9,17,0,0:3,9:NULL:193.248:326.675,113.385:0.0,0.0:1.17708e-26,0.0114446,0.988582
-chr1	6573728	.	TGTTTGTTTGTTTGTT	.	.	.	END=6573743;RU=tgtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,8,0,0:4,24:NULL:166.086:326.675,113.385:0.0,0.0:0.0,4.58797e-07,1.0
-chr1	6574488	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=6574515;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999572:7,7:7-7,7-7:14,9,0,7:7,14:2,1|3,2|5,2|6,2:187.963:326.675,113.385:0.0,0.0:1.16039e-33,0.000195257,0.999805
-chr1	6575450	.	TTTATTTATTTATTTA	.	.	.	END=6575465;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:151.885:326.675,113.385:0.0,0.0:0.0,2.16543e-06,1.0
-chr1	6579057	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6579090;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.952174:17,17:16-18,16-18:15,12,0,12:16,3|17,12:5,1|9,1|10,1|11,2|12,2|14,1|15,3|16,1:284.142:326.675,113.385:0.382183,0.382183:4.47207e-14,0.0474327,0.952644
-chr1	6581899	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6581934;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.741081:17,18:16-18,16-18:4,10,0,8:17,2|18,2:5,1|11,2|13,2|14,1|16,1|17,1:178.74:326.675,113.385:0.5634,0.711908:0.0240193,0.808404,0.167687
-chr1	6582216	.	TTTTGTTTTGTTTTG	.	.	.	END=6582230;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999727:3,3:3-3,3-3:15,9,0,0:3,15:NULL:141.616:326.675,113.385:0.0,0.0:0.0,0.000159982,0.999842
-chr1	6589837	.	AATGAATGAATG	.	.	.	END=6589848;RU=aatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:210.49:326.675,113.385:0.0,0.0:0.0,2.6585e-06,1.0
-chr1	6589908	.	AGTCAGTCAGTC	.	.	.	END=6589919;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,21,0,2:3,22:2,2:286.925:326.675,113.385:0.0,0.0:0.0,6.81537e-07,1.0
-chr1	6591632	.	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	.	.	.	END=6591681;RU=ttcct;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.970062:10,10:10-10,10-10:8,10,0,10:10,8:2,1|4,1|5,1|6,3|7,2|8,1|10,1:193.083:326.675,113.385:0.0,0.0:1.12305e-28,0.0144447,0.985586
-chr1	6591950	.	TCCTTTCCTTTCCTTTCCTT	.	.	.	END=6591969;RU=tcctt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:23,1,0,2:4,23:2,1|3,1:113.988:326.675,113.385:0.0,0.0:0.0,4.22388e-07,1.0
-chr1	6598126	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6598147;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99526:11,11:10-11,10-11:17,12,0,3:10,2|11,15:6,1|7,1|8,1:215.682:326.675,113.385:0.195027,0.195027:7.28222e-22,0.00466829,0.995342
-chr1	6601383	.	TGTGTGTGTGTG	.	.	.	END=6601394;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,7,0,5:6,22:5,5:192.526:326.675,113.385:0.0,0.0:0.0,6.67475e-07,1.0
-chr1	6601485	.	AGGGAGGGAGGG	.	.	.	END=6601496;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,16,0,2:3,27:2,2:260.68:326.675,113.385:0.0,0.0:0.0,2.88615e-08,1.0
-chr1	6602519	.	TTATTATTATTATTATTATTATTATTA	.	.	.	END=6602545;RU=tta;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.50064:9,9:8-9,8-9:15,8,0,5:8,3|9,12:3,1|5,1|6,1|7,1|8,1:177.338:326.675,113.385:0.472558,0.472558:4.96969e-19,0.499154,0.500847
-chr1	6626511	.	ACCCACCCACCC	.	.	.	END=6626522;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,29,0,0:3,22:NULL:342.245:326.675,113.385:0.0,0.0:0.0,2.41659e-06,1.0
-chr1	6633217	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6633244;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:14,14:14-14,14-14:26,16,0,9:14,26:5,1|6,1|7,2|8,2|9,1|10,1|13,1:333.577:326.675,113.385:0.0,0.0:5.2809e-28,3.76402e-07,1.0
-chr1	6635223	.	AGGAAGGAAGGAAGGAAGGAAGGA	.	.	.	END=6635246;RU=agga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:22,23,0,5:6,22:3,2|4,1|5,2:338.493:326.675,113.385:0.0,0.0:0.0,1.79946e-06,1.0
-chr1	6637761	.	AAAACAAAACAAAAC	.	.	.	END=6637775;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,9,0,2:3,19:2,1|3,1:177.292:326.675,113.385:0.0,0.0:0.0,4.63746e-06,0.999995
-chr1	6639022	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=6639049;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981574:14,14:13-14,13-14:24,35,0,16:13,5|14,19:5,3|7,1|8,3|9,1|10,4|12,2|13,2:555.047:326.675,113.385:0.345543,0.345543:3.88947e-19,0.0184703,0.98157
-chr1	6650989	.	ACACACACACACACACAC	.	.	.	END=6651006;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999539:9,9:8-9,8-9:20,9,0,8:8,2|9,18:6,1|7,1|8,5|9,1:235.415:326.675,113.385:0.294378,0.294378:9.34017e-37,0.000476681,0.999523
-chr1	6652069	.	AATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=6652100;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:24,9,0,4:8,24:4,1|7,3:214.106:326.675,113.385:0.0,0.0:0.0,1.95385e-07,1.0
-chr1	6653054	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=6653073;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:4-5,4-5:27,19,0,5:5,27:3,2|4,3:316.099:326.675,113.385:0.169767,0.169767:0.0,2.97714e-08,1.0
-chr1	6660614	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6660633;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999755:5,5:5-5,5-5:15,12,0,2:5,15:3,2:181.981:326.675,113.385:0.0,0.0:0.0,0.000150829,0.99985
-chr1	6661173	.	GTTTTGTTTTGTTTT	.	.	.	END=6661187;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,2:183.986:326.675,113.385:0.0,0.0:0.0,3.33869e-06,1.0
-chr1	6662622	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6662661;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.286442:20,25:20-20,12-26:15,9,0,16:19,2|20,13:5,1|6,1|10,1|11,2|12,1|13,1|14,1|15,3|16,2|19,1|23,1|25,1:288.356:326.675,113.385:0.0,4.65993:6.93767e-25,5.20978e-13,1.0
-chr1	6663558	.	CTGCTGCTGCTG	.	.	.	END=6663569;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:34,27,0,2:4,34:3,2:402.862:326.675,113.385:0.0,0.0:0.0,3.71134e-10,1.0
-chr1	6664650	.	TATGTATGTATG	.	.	.	END=6664661;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:144.866:326.675,113.385:0.0,0.0:0.0,4.62343e-07,1.0
-chr1	6666335	.	TCCCTCCCTCCC	.	.	.	END=6666346;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,22,0,3:3,29:2,3:335.04:326.675,113.385:0.0,0.0:0.0,7.12479e-09,1.0
-chr1	6666349	.	TCTTTCTTTCTT	.	.	.	END=6666360;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:300.283:326.675,113.385:0.0,0.0:0.0,1.5381e-09,1.0
-chr1	6666375	.	TGTGTGTGTGTGTGTG	.	.	.	END=6666390;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:26,19,0,5:8,26:4,1|6,2|7,2:317.137:326.675,113.385:0.0,0.0:2.8061e-41,8.445e-08,1.0
-chr1	6671371	.	AAGAAAGAAAGAAAGA	.	.	.	END=6671386;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998983:4,4:4-4,4-4:14,8,0,0:4,14:NULL:134.801:326.675,113.385:0.0,0.0:2.455e-42,0.000664496,0.999339
-chr1	6673316	.	AAACAAACAAAC	.	.	.	END=6673327;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,21,0,0:3,31:NULL:317.693:326.675,113.385:0.0,0.0:0.0,1.1136e-08,1.0
-chr1	6674435	.	ACACACACACACACACACACACACACAC	.	.	.	END=6674462;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993236:14,14:13-14,13-14:26,23,0,5:13,6|14,20:5,3|6,2:376.116:326.675,113.385:0.323567,0.323567:4.66391e-23,0.00678172,0.993234
-chr1	6680517	.	TGGGTGGGTGGG	.	.	.	END=6680528;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:263.257:326.675,113.385:0.0,0.0:0.0,3.35788e-07,1.0
-chr1	6684271	.	ACAAACAAACAAACAA	.	.	.	END=6684286;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:4,4:4-4,4-4:18,9,0,6:4,18:3,6:196.145:326.675,113.385:0.0,0.0:0.0,1.14496e-05,0.999988
-chr1	6690576	.	TATATATATATA	.	.	.	END=6690587;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999204:6,6:6-6,6-6:14,7,0,0:6,14:NULL:125.106:326.675,113.385:0.0,0.0:7.2177e-23,0.000535469,0.999469
-chr1	6703494	.	TATATATATATATATATATATATATATA	.	.	.	END=6703521;RU=ta;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.479794:14,14:14-14,14-14:4,6,0,0:14,4:NULL:71.5921:326.675,113.385:0.417958,0.417958:0.00029151,0.284597,0.715118
-chr1	6711923	.	CAAACAAACAAACAAA	.	.	.	END=6711938;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:181.384:326.675,113.385:0.0,0.0:0.0,3.89179e-08,1.0
-chr1	6713866	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6713917;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.987703:26,27:21-26,21-28:13,15,0,12:25,2|26,9|27,2:5,1|6,1|13,2|14,1|15,1|21,1|23,3|24,1|27,1:300.289:326.675,113.385:0.973827,1.47541:6.51093e-19,1.9854e-05,0.99998
-chr1	6713993	.	TGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6714004;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.284611:6,18:6-6,6-21:43,16,0,3:6,43:11,1|13,1|18,1:369.866:326.675,113.385:0.0,5.2541:0.0,5.92463e-21,1.0
-chr1	6716659	.	TTTCTTTCTTTC	.	.	.	END=6716670;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,11,0,5:3,31:2,5:260.567:326.675,113.385:0.0,0.0:0.0,1.18079e-09,1.0
-chr1	6720277	.	ACATACATACAT	.	.	.	END=6720288;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.205:326.675,113.385:0.0,0.0:0.0,1.36787e-06,1.0
-chr1	6721062	.	CACACACACACA	.	.	.	END=6721073;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:6,6:6-6,6-6:19,15,0,0:6,19:NULL:208.771:326.675,113.385:0.0,0.0:8.8628e-41,1.658e-05,0.999986
-chr1	6721105	.	TTTTGTTTTGTTTTG	.	.	.	END=6721119;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,6,0,3:3,32:2,3:204.171:326.675,113.385:0.0,0.0:0.0,5.65962e-10,1.0
-chr1	6722604	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=6722663;RU=ttttg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999287:12,12:12-12,12-12:13,15,0,18:12,13:3,1|4,2|5,4|6,1|7,1|8,3|9,2|11,4:320.81:326.675,113.385:0.0,0.0:1.50531e-38,0.000313811,0.999689
-chr1	6723584	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6723621;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.994947:18,19:18-20,19-19:14,11,0,13:18,4|19,10:6,1|8,1|9,2|10,2|14,2|15,2|16,2|18,1:273.883:326.675,113.385:0.540307,0.0:1.55211e-10,0.99495,0.0050625
-chr1	6728597	.	TTTCTTTCTTTC	.	.	.	END=6728608;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,5,0,2:3,27:2,2:166.45:326.675,113.385:0.0,0.0:0.0,2.15002e-08,1.0
-chr1	6730348	.	TGGGTGGGTGGGTGGG	.	.	.	END=6730363;RU=tggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999845:4,4:4-4,4-4:16,29,0,2:4,16:3,2:341.888:326.675,113.385:0.0,0.0:0.0,0.000106812,0.999895
-chr1	6730422	.	TGCTTTGCTTTGCTT	.	.	.	END=6730436;RU=tgctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:54,10,0,5:3,54:2,5:341.071:326.675,113.385:0.0,0.0:0.0,1.7461e-16,1.0
-chr1	6734369	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=6734401;RU=ttg;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:11,11:11-11,11-11:20,16,0,14:11,20:3,1|4,1|5,2|6,2|7,2|8,1|9,2|10,3:341.701:326.675,113.385:0.0,0.0:3.28e-43,3.46465e-06,1.0
-chr1	6735467	.	AATCAATCAATC	.	.	.	END=6735478;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:218.448:326.675,113.385:0.0,0.0:0.0,5.86043e-06,0.999995
-chr1	6736982	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6737025;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.903804:22,22:21-23,21-23:16,12,0,14:21,3|22,11|23,2:6,1|7,1|8,1|9,1|10,3|11,1|15,1|19,1|20,2|22,2:305.424:326.675,113.385:0.559734,0.559734:1.7949e-27,0.00514933,0.994866
-chr1	6740766	.	GTTTGTTTGTTTGTTT	.	.	.	END=6740781;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:228.081:326.675,113.385:0.0,0.0:0.0,4.35477e-07,1.0
-chr1	6745472	.	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6745495;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:3-6,3-6:21,8,0,6:6,21:2,1|3,1|4,2|5,2:198.513:326.675,113.385:0.934582,0.934582:0.0,1.88575e-06,1.0
-chr1	6748758	.	AAACAAACAAACAAAC	.	.	.	END=6748773;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,13,0,6:4,26:2,1|3,5:263.236:326.675,113.385:0.0,0.0:0.0,4.99948e-08,1.0
-chr1	6749336	.	GTTTGTTTGTTT	.	.	.	END=6749347;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999856:3,3:3-3,3-3:16,5,0,0:3,16:NULL:109.32:326.675,113.385:0.0,0.0:0.0,6.8238e-05,0.999933
-chr1	6751150	.	AAAAGAAAAGAAAAG	.	.	.	END=6751164;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.154:326.675,113.385:0.0,0.0:0.0,9.84342e-06,0.999993
-chr1	6752073	.	TATCTATCTATC	.	.	.	END=6752084;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,12,0,2:3,27:2,2:228.917:326.675,113.385:0.0,0.0:0.0,2.1434e-08,1.0
-chr1	6752139	.	TTGTTGTTGTTG	.	.	.	END=6752150;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,14,0,3:4,22:3,3:234.628:326.675,113.385:0.0,0.0:0.0,7.82498e-07,1.0
-chr1	6752213	.	AAACAAACAAAC	.	.	.	END=6752224;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,11,0,2:3,27:2,2:222.519:326.675,113.385:0.0,0.0:0.0,2.70935e-08,1.0
-chr1	6754429	.	TTTGTTTTGTTTTGT	.	.	.	END=6754443;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:3,3:3-3,3-3:18,9,0,3:3,18:2,3:174.936:326.675,113.385:0.0,0.0:0.0,9.15557e-06,0.999993
-chr1	6756494	.	TATATATATATATA	.	.	.	END=6756507;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991242:7,7:7-7,7-7:11,10,0,0:7,11:NULL:132.924:326.675,113.385:0.0,0.0:1.14522e-19,0.00589292,0.994121
-chr1	6762157	.	CTTTCTTTCTTT	.	.	.	END=6762168;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979383:3,3:3-3,3-3:9,5,0,0:3,9:NULL:84.5507:326.675,113.385:0.0,0.0:2.28729e-30,0.010148,0.989873
-chr1	6765667	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6765686;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,14,0,2:5,25:3,2:246.049:326.675,113.385:0.0,0.0:0.0,1.92216e-07,1.0
-chr1	6766469	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6766494;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997988:13,13:13-13,13-13:18,15,0,11:12,2|13,16:4,1|5,1|6,1|9,3|10,2|11,2|12,1:301.827:326.675,113.385:0.139319,0.139319:3.51002e-17,0.00196364,0.998042
-chr1	6766823	.	AAAAGAAAAGAAAAG	.	.	.	END=6766837;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999828:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.407:326.675,113.385:0.0,0.0:0.0,0.000120073,0.99988
-chr1	6772439	.	GGGTGGGTGGGT	.	.	.	END=6772450;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999152:3,3:3-3,3-3:14,16,0,0:3,14:NULL:197.744:326.675,113.385:0.0,0.0:7.51e-43,0.000631579,0.99937
-chr1	6777440	.	AAGAAGAAGAAG	.	.	.	END=6777451;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,11,0,2:4,25:3,2:210.852:326.675,113.385:0.0,0.0:0.0,1.09758e-07,1.0
-chr1	6782984	.	AAGAAGAAGAAG	.	.	.	END=6782995;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:24,19,0,0:4,24:NULL:268.718:326.675,113.385:0.270063,0.270063:0.0,6.42206e-07,1.0
-chr1	6784915	.	ACACACACACACACACACACACACACACACACACAC	.	.	.	END=6784950;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.971275:18,18:16-18,16-18:10,21,0,12:18,10:5,1|7,2|9,1|10,2|11,1|12,1|14,2|15,2:331.534:326.675,113.385:0.480581,0.480581:1.27448e-12,0.0139845,0.986045
-chr1	6785690	.	TAAATAAATAAA	.	.	.	END=6785701;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,23,0,0:3,38:NULL:354.587:326.675,113.385:0.0,0.0:0.0,2.68286e-11,1.0
-chr1	6788409	.	TTTGTTTGTTTG	.	.	.	END=6788420;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:259.589:326.675,113.385:0.0,0.0:0.0,7.9757e-10,1.0
-chr1	6790829	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6790884;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.784671:28,29:28-29,28-29:6,13,0,9:28,4|29,2:5,1|6,1|7,1|13,1|14,1|15,1|16,1|24,1|25,1:230.192:326.675,113.385:0.253975,0.44763:8.85426e-07,0.0276042,0.972453
-chr1	6790889	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6790928;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98747:20,20:20-21,20-21:11,13,0,7:20,11:6,1|9,1|10,2|12,1|13,1|18,1:228.719:326.675,113.385:0.294378,0.294378:1.13944e-13,0.00558371,0.994429
-chr1	6798413	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	.	END=6798460;RU=gata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992273:12,12:12-12,12-12:10,13,0,9:12,10:2,1|4,1|5,1|6,1|8,1|9,1|11,3:229.25:326.675,113.385:0.0,0.0:2.29615e-23,0.00432192,0.995689
-chr1	6801379	.	ACAAGACAAGACAAG	.	.	.	END=6801393;RU=acaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:318.985:326.675,113.385:0.0,0.0:0.0,8.73404e-09,1.0
-chr1	6802048	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6802089;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961253:21,21:18-29,18-29:15,13,0,13:20,3|21,12:5,1|6,1|8,1|10,1|13,3|15,1|16,1|18,1|19,2|20,1:297.166:326.675,113.385:4.22868,4.22868:1.29016e-12,0.0378589,0.962208
-chr1	6804083	.	TGCTGCTGCTGCTGC	.	.	.	END=6804097;RU=tgc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:29,10,0,0:5,29:NULL:204.217:326.675,113.385:0.0,0.0:0.0,1.42854e-08,1.0
-chr1	6806447	.	CATGCATGCATG	.	.	.	END=6806458;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:287.628:326.675,113.385:0.0,0.0:0.0,5.02911e-09,1.0
-chr1	6812486	.	AGCAAGCAAGCA	.	.	.	END=6812497;RU=agca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:3,3:3-3,3-3:17,13,0,0:3,17:NULL:190.203:326.675,113.385:0.0,0.0:0.0,5.80473e-05,0.999942
-chr1	6829363	.	ACCCACCCACCC	.	.	.	END=6829374;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:284.469:326.675,113.385:0.0,0.0:0.0,4.73609e-06,0.999995
-chr1	6830436	.	ACACACACACAC	.	.	.	END=6830447;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998197:6,6:5-6,5-6:23,10,0,4:5,2|6,21:4,2|5,2:221.385:326.675,113.385:0.36513,0.36513:4.3e-44,0.00180941,0.998194
-chr1	6830470	.	GGAGGGAGGGAG	.	.	.	END=6830481;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:186.791:326.675,113.385:0.0,0.0:0.0,1.12599e-06,1.0
-chr1	6831326	.	AAGCAAGCAAGC	.	.	.	END=6831337;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999973:3,3:3-3,3-3:18,7,0,0:3,18:NULL:136.979:326.675,113.385:0.0,0.0:0.0,2.05381e-05,0.99998
-chr1	6832131	.	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=6832174;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.818535:22,22:22-23,22-23:15,12,0,14:21,2|22,11|23,2:4,1|5,1|6,1|9,1|10,1|11,1|12,1|13,1|15,3|16,1|18,1|20,1:293.524:326.675,113.385:0.469228,0.469228:1.8178e-13,0.00523002,0.994783
-chr1	6834875	.	CTTCTTCTTCTTCTT	.	.	.	END=6834889;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,17,0,0:5,24:NULL:253.329:326.675,113.385:0.0,0.0:0.0,8.6663e-07,1.0
-chr1	6842625	.	ATGGATGGATGG	.	.	.	END=6842636;RU=atgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,16,0,3:3,27:2,3:272.712:326.675,113.385:0.0,0.0:0.0,2.1608e-08,1.0
-chr1	6845815	.	TGTTGTTGTTGT	.	.	.	END=6845826;RU=tgt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999669:4,4:4-4,4-4:15,7,0,0:4,15:NULL:125.168:326.675,113.385:0.0,0.0:0.0,0.00017801,0.999826
-chr1	6852419	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6852478;RU=agga;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.879306:15,16:15-15,15-16:12,20,0,12:15,9|16,3:3,1|5,1|6,1|7,1|9,2|11,2|12,2|13,1|15,1:332.587:326.675,113.385:0.0,0.484441:2.61894e-23,0.000296602,0.999705
-chr1	6852486	.	AGGCAGGCAGGC	.	.	.	END=6852497;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,12,0,0:3,31:NULL:228.067:326.675,113.385:0.0,0.0:0.0,2.71519e-09,1.0
-chr1	6855646	.	CAGCAGCAGCAGCAG	.	.	.	END=6855660;RU=cag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,11,0,0:5,24:NULL:195.661:326.675,113.385:0.0,0.0:0.0,4.6101e-07,1.0
-chr1	6856365	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6856396;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999082:16,16:16-16,16-16:20,5,0,4:15,3|16,17:5,1|10,1|11,1|15,1:165.745:326.675,113.385:0.0,0.0:2.09772e-20,0.000841373,0.999164
-chr1	6858278	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6858317;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.330157:20,36:20-20,19-36:20,12,0,16:19,5|20,13|21,2:4,1|5,1|8,1|9,2|11,1|12,2|14,1|15,1|16,3|17,1|18,1|36,1:357.236:326.675,113.385:0.0990099,8.00505:3.23109e-15,0.00236699,0.99764
-chr1	6862315	.	AAAATAAAATAAAAT	.	.	.	END=6862329;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:238.178:326.675,113.385:0.0,0.0:0.0,2.03729e-07,1.0
-chr1	6864440	.	TTTGTTTGTTTG	.	.	.	END=6864451;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:161.012:326.675,113.385:0.0,0.0:0.0,2.86971e-07,1.0
-chr1	6865995	.	AAAGAAAAGAAAAGA	.	.	.	END=6866009;RU=aaaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997123:3,3:3-3,3-3:11,14,0,3:3,11:2,3:191.584:326.675,113.385:0.0,0.0:2.80918e-35,0.00147673,0.998527
-chr1	6868261	.	GTTTGTTTGTTT	.	.	.	END=6868272;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:254.657:326.675,113.385:0.0,0.0:0.0,6.79809e-08,1.0
-chr1	6869420	.	ATGTAGATGTAGATGTAGATGTAG	.	.	.	END=6869443;RU=atgtag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,8,0,2:4,28:3,2:201.403:326.675,113.385:0.0,0.0:0.0,1.7602e-08,1.0
-chr1	6870752	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6870787;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.986942:18,19:17-18,17-19:14,13,0,11:17,3|18,9|19,2:4,1|6,1|7,1|10,1|12,1|13,1|15,2|16,1|17,1|19,1:282.411:326.675,113.385:0.169767,0.61895:5.50292e-17,0.000124617,0.999879
-chr1	6872012	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=6872031;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999866:4,4:4-4,4-4:16,8,0,3:4,16:2,1|3,2:156.875:326.675,113.385:0.0,0.0:0.0,6.58613e-05,0.999934
-chr1	6872093	.	GTGTGTGTGTGT	.	.	.	END=6872104;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99991:6,6:6-6,6-6:17,5,0,0:6,17:NULL:110.788:326.675,113.385:0.0,0.0:2.43651e-29,5.65674e-05,0.999947
-chr1	6872191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6872254;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.0451539:29,34:16-32,16-34:0,13,0,10:NULL:5,1|8,1|13,1|16,1|20,1|26,1|27,1|29,2|34,1:195.557:326.675,113.385:7.01576,8.73288:5.43447e-08,0.643162,0.35688
-chr1	6876058	.	ACACACACACACACACACACACACACAC	.	.	.	END=6876085;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999752:14,14:14-17,14-17:17,5,0,9:14,17:5,2|8,2|9,1|11,1|12,1|13,1|14,1:190.632:326.675,113.385:0.924033,0.924033:3.31908e-30,2.98706e-05,0.999971
-chr1	6876396	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	.	END=6876439;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995289:11,11:10-11,10-11:11,15,0,8:11,11:3,1|4,1|5,2|6,1|7,1|8,1|9,1:246.682:326.675,113.385:0.323567,0.323567:2.91614e-28,0.00364165,0.996368
-chr1	6876754	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=6876787;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.953393:17,17:17-18,17-18:15,15,0,15:17,13|18,2:4,2|7,2|9,1|11,1|12,4|13,1|14,2|15,1|16,1:330.521:326.675,113.385:0.298675,0.298675:9.93793e-16,0.00036573,0.999636
-chr1	6877580	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6877621;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.299487:21,25:21-21,21-27:7,5,0,10:21,7:6,1|7,1|8,2|9,1|10,1|12,1|14,1|16,1|25,1:164.464:326.675,113.385:0.0,2.20972:3.99637e-15,1.38343e-07,1.0
-chr1	6877626	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6877675;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.124742:24,24:17-25,17-25:2,6,0,9:24,2:6,1|9,1|11,2|15,1|16,2|17,2:136.348:326.675,113.385:3.45807,3.45807:0.699534,0.284439,0.016058
-chr1	6881104	.	ATATATATATAT	.	.	.	END=6881115;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,9,0,0:6,21:NULL:171.527:326.675,113.385:0.0,0.0:4.71048e-28,4.14109e-06,0.999995
-chr1	6881253	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6881268;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.296309:8,13:8-8,8-14:19,12,0,4:8,19:4,1|5,1|7,1|13,1:230.348:326.675,113.385:0.0,2.59293:3.54084e-40,9.23434e-08,1.0
-chr1	6882309	.	TTGTTGTTGTTG	.	.	.	END=6882320;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:4,4:4-4,4-4:19,9,0,0:4,19:NULL:159.511:326.675,113.385:0.0,0.0:0.0,1.9165e-05,0.99998
-chr1	6884104	.	CAACAACAACAACAA	.	.	.	END=6884118;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,10,0,2:5,21:4,2:192.446:326.675,113.385:0.0,0.0:0.0,3.0523e-06,1.0
-chr1	6886094	.	AAAACAAAACAAAAC	.	.	.	END=6886108;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:152.486:326.675,113.385:0.0,0.0:0.0,6.3523e-06,0.999994
-chr1	6888655	.	GCCAGCCAGCCA	.	.	.	END=6888666;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,7,0,2:3,23:2,2:168.016:326.675,113.385:0.0,0.0:0.0,4.24213e-07,1.0
-chr1	6891722	.	AGGGAGGGAGGGAGGG	.	.	.	END=6891737;RU=aggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999888:4,4:3-4,3-4:16,18,0,0:4,16:NULL:228.159:326.675,113.385:0.21692,0.21692:1.29816e-39,0.000103964,0.999896
-chr1	6891738	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=6891777;RU=ga;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.525647:20,20:18-20,18-20:9,18,0,8:19,3|20,6:5,1|6,1|8,1|14,3|18,1|20,1:277.976:326.675,113.385:0.66122,0.66122:2.49917e-14,0.468764,0.531344
-chr1	6897317	.	TATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=6897366;RU=ta;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.110435:24,24:19-26,19-26:2,4,0,0:24,2:NULL:48.8495:326.675,113.385:2.84784,2.84784:0.636096,0.33096,0.0330274
-chr1	6901344	.	TATTATTATTAT	.	.	.	END=6901355;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999632:4,4:4-4,4-4:15,6,0,0:4,15:NULL:114.575:326.675,113.385:0.0,0.0:3.2e-44,0.000213797,0.999788
-chr1	6901756	.	TTGGTTGGTTGG	.	.	.	END=6901767;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999895:3,3:3-3,3-3:16,6,0,4:3,16:2,4:150.512:326.675,113.385:0.0,0.0:0.0,3.60843e-05,0.999964
-chr1	6905302	.	ACCACCACCACC	.	.	.	END=6905313;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995309:4,4:4-4,4-4:11,8,0,0:4,11:NULL:114.625:326.675,113.385:0.0,0.0:1.1877e-37,0.00296103,0.997048
-chr1	6908211	.	CCCTCCCTCCCT	.	.	.	END=6908222;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.755:326.675,113.385:0.0,0.0:0.0,2.04981e-06,1.0
-chr1	6910139	.	AAACAAACAAACAAACAAAC	.	.	.	END=6910158;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998254:5,5:5-5,5-5:13,14,0,2:5,13:2,1|4,1:194.432:326.675,113.385:0.0,0.0:2e-44,0.00126943,0.998733
-chr1	6911240	.	CCCACCCCACCCCAC	.	.	.	END=6911254;RU=cccac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.945509:3,3:3-3,3-3:8,16,0,0:3,8:NULL:177.178:326.675,113.385:0.19802,0.19802:1.03576e-24,0.0401747,0.959892
-chr1	6925140	.	TTTGTTTGTTTGTTTG	.	.	.	END=6925155;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,13,0,2:4,20:2,1|3,1:211.672:326.675,113.385:0.0,0.0:0.0,6.06461e-06,0.999994
-chr1	6930503	.	TGTTTTTTTGTTTTTTTGTTTTTT	.	.	.	END=6930526;RU=tgtttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:171.573:326.675,113.385:0.0,0.0:0.0,2.04177e-06,1.0
-chr1	6933915	.	GAGGGGAGGAGGGGAGGAGGGGAGGAGGGGAG	.	.	.	END=6933946;RU=gaggggag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.353389:4,4:1-4,1-4:3,5,0,0:4,3:NULL:60.2262:326.675,113.385:0.782116,0.782116:2.05313e-08,0.459316,0.540791
-chr1	6935598	.	TACATACATACA	.	.	.	END=6935609;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999555:3,3:3-3,3-3:14,8,0,4:3,14:2,4:155.577:326.675,113.385:0.0,0.0:0.0,0.000136997,0.999865
-chr1	6935929	.	TAATTAATTAAT	.	.	.	END=6935940;RU=taat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997324:3,3:3-3,3-3:12,8,0,0:3,12:NULL:115.153:326.675,113.385:0.0,0.0:6.01711e-39,0.00141431,0.998588
-chr1	6938052	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6938097;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.361021:23,29:23-23,20-31:15,17,0,23:22,2|23,13:5,1|6,1|7,1|8,1|11,2|12,2|13,3|14,1|16,2|17,1|18,2|19,1|20,1|21,2|22,1|29,1:436.004:326.675,113.385:0.0,3.32414:1.20159e-17,2.01133e-05,0.99998
-chr1	6938544	.	ATACATACATACATAC	.	.	.	END=6938559;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:39,21,0,5:4,39:2,1|3,4:381.92:326.675,113.385:0.0,0.0:0.0,7.22622e-12,1.0
-chr1	6938593	.	CACACACACACACACACA	CACACACACACACACACACA	.	.	END=6938610;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.961031:9,10:9-9,9-10:30,23,0,10:9,28|10,2:4,2|5,1|8,6|10,1:428.184:326.675,113.385:0.0,0.498798:7.6e-44,2.5635e-10,1.0
-chr1	6938918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6938965;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.403396:24,29:24-24,24-29:18,24,0,20:23,5|24,13:5,3|6,1|7,1|8,1|9,1|10,1|11,1|13,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|28,1|29,1:487.422:326.675,113.385:0.0,1.35271:1.02382e-27,1.19979e-11,1.0
-chr1	6945641	.	TGTGAGTGTGAGTGTGAG	.	.	.	END=6945658;RU=tgtgag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,21,0,4:3,29:2,3|3,1:332.918:326.675,113.385:0.0,0.0:0.0,8.39224e-09,1.0
-chr1	6945661	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=6945680;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:39,17,0,6:9,3|10,36:5,1|6,1|7,1|8,1|9,2:371.987:326.675,113.385:0.0990099,0.0990099:0.0,2.72637e-08,1.0
-chr1	6954438	.	TATATATATATATATATA	.	.	.	END=6954455;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999478:9,9:9-9,9-9:15,7,0,0:9,15:NULL:128.249:326.675,113.385:0.0,0.0:2.06945e-18,0.000350763,0.999652
-chr1	6956316	.	ATTTATTTATTTATTTATTTATTTATTTATTT	.	.	.	END=6956347;RU=attt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999661:8,8:8-8,8-8:15,5,0,6:8,15:3,2|5,2|6,2:152.494:326.675,113.385:0.0,0.0:6.12333e-34,0.000170439,0.999833
-chr1	6957040	.	ATCATCATCATC	.	.	.	END=6957051;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:182.817:326.675,113.385:0.0,0.0:0.0,3.3155e-08,1.0
-chr1	6958768	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGT	.	.	END=6958779;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.293816:6,9:6-6,6-10:10,17,0,2:6,10:6,1|8,1:213.017:326.675,113.385:0.0,1.39551:5.11656e-28,6.98227e-08,1.0
-chr1	6958877	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6958916;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.318887:20,35:20-20,20-35:15,11,0,15:20,15:5,1|7,3|9,2|12,1|13,2|17,1|18,2|19,1|35,2:299.43:326.675,113.385:0.0,6.05764:5.30546e-27,3.70236e-14,1.0
-chr1	6961641	.	AAGAAAAAAGAAAAAAGAAAAAAGAAAA	.	.	.	END=6961668;RU=aagaaaa;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999069:4,4:4-4,4-4:15,15,0,0:4,15:NULL:201.791:326.675,113.385:0.0,0.0:9.2e-44,0.00088725,0.999118
-chr1	6967994	.	TAATAATAATAA	.	.	.	END=6968005;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999557:4,4:4-4,4-4:15,10,0,0:4,15:NULL:149.73:326.675,113.385:0.0,0.0:7.03689e-40,0.000286317,0.999713
-chr1	6969238	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=6969285;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.66372:24,24:23-24,23-24:5,21,0,20:24,5:4,1|6,2|9,1|11,1|12,2|13,1|14,5|15,3|17,1|20,1|21,1|23,1:371.431:326.675,113.385:0.439006,0.439006:1.94957e-06,0.16676,0.83331
-chr1	6970340	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=6970399;RU=ag;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.484082:30,30:29-30,29-30:4,12,0,11:30,4:6,1|7,1|9,1|10,1|12,3|18,1|22,1|23,1|30,1:220.422:326.675,113.385:0.414188,0.414188:1.43804e-12,0.213388,0.786655
-chr1	6970529	.	AGACAGACAGAC	.	.	.	END=6970540;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:168.514:326.675,113.385:0.0,0.0:0.0,4.77189e-06,0.999995
-chr1	6974307	.	ACACACACACAC	.	.	.	END=6974318;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.92277:6,6:6-7,6-7:7,9,0,2:6,7:5,2:129.578:326.675,113.385:0.486863,0.486863:8.90486e-15,0.0332825,0.966779
-chr1	6978082	.	ATTTATTTATTTATTT	.	.	.	END=6978097;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999606:4,4:4-4,4-4:15,10,0,0:4,15:NULL:154.043:326.675,113.385:0.0,0.0:3e-45,0.000300969,0.999704
-chr1	6979840	.	TTCATTCATTCA	.	.	.	END=6979851;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:165.684:326.675,113.385:0.0,0.0:0.0,3.1439e-06,1.0
-chr1	6981484	.	TGTCTGTCTGTCTGTC	.	.	.	END=6981499;RU=tgtc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,19,0,9:4,32:2,1|3,8:361.317:326.675,113.385:0.0,0.0:0.0,7.5252e-10,1.0
-chr1	6982427	.	TTGTTTGTTTGTTTGT	.	.	.	END=6982442;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,3:271.065:326.675,113.385:0.0,0.0:0.0,1.84623e-09,1.0
-chr1	6982601	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6982652;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.312785:26,39:24-27,24-39:3,6,0,17:26,3:7,1|8,2|10,1|12,1|15,2|16,1|17,2|18,1|24,3|25,2|39,1:210.08:326.675,113.385:0.517131,6.22137:8.48768e-11,0.000485426,0.999515
-chr1	6983427	.	GAGAGAGAGAGAGAGA	.	.	.	END=6983442;RU=ga;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929127:8,8:7-8,7-8:15,8,0,0:7,2|8,13:NULL:140.313:326.675,113.385:0.431574,0.431574:5.41404e-20,0.0708413,0.929253
-chr1	6985748	.	AATCAATCAATCAATCAATCAATCAATC	.	.	.	END=6985775;RU=aatc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:33,14,0,9:7,33:3,2|4,2|5,2|6,3:328.098:326.675,113.385:0.0,0.0:0.0,3.53258e-10,1.0
-chr1	6985795	.	AACAACAACAACAACAAC	.	.	.	END=6985812;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:34,14,0,2:6,34:4,2:280.867:326.675,113.385:0.0,0.0:0.0,3.42017e-10,1.0
-chr1	6986592	.	AAACAAACAAACAAAC	.	.	.	END=6986607;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998937:4,4:4-4,4-4:13,17,0,3:4,13:2,1|3,2:226.162:326.675,113.385:0.0,0.0:7.04477e-36,0.000588515,0.999415
-chr1	6987484	.	AAGAAAGAAAGA	.	.	.	END=6987495;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:128.281:326.675,113.385:0.0,0.0:0.0,2.64797e-06,1.0
-chr1	6988550	.	TAAATAAATAAA	.	.	.	END=6988561;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,3,0,0:3,21:NULL:111.913:326.675,113.385:0.0,0.0:0.0,2.54549e-06,1.0
-chr1	6988683	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	.	END=6988726;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.467214:11,11:9-11,9-11:13,12,0,7:9,2|11,11:3,1|6,2|7,1|8,1|10,2:229.771:326.675,113.385:0.999559,0.999559:5.65804e-20,0.53254,0.467569
-chr1	6988729	.	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	.	.	END=6988989;RU=cctttcttc;PERIOD=9;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.229205:13,44:10-19,40-49:0,5,45,24:NULL:4,4|5,1|6,3|7,3|8,2|9,3|10,5|11,1|12,1|13,1:532.764:326.675,113.385:1.94191,2.30908:2.71327e-26,1.0,2.09857e-20
-chr1	6988990	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	.	END=6989021;RU=cttt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:8,8:4-8,4-8:23,14,0,14:8,23:3,2|4,5|5,2|6,1|7,4:324.178:326.675,113.385:0.780108,0.780108:0.0,4.11433e-07,1.0
-chr1	6994475	.	CTGCTGCTGCTG	.	.	.	END=6994486;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,19,0,0:4,24:NULL:271.361:326.675,113.385:0.0,0.0:0.0,1.08504e-06,1.0
-chr1	6996371	.	AATAATAATAATAATAAT	.	.	.	END=6996388;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:2-6,2-6:26,11,0,4:6,26:5,4:232.728:326.675,113.385:1.24611,1.24611:0.0,5.89955e-08,1.0
-chr1	6996545	.	AAGAAGAAGAAGAAG	.	.	.	END=6996559;RU=aag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,6,0,2:5,26:4,1|5,1:173.389:326.675,113.385:0.0,0.0:0.0,3.43247e-08,1.0
-chr1	6998981	.	AAAATAAAATAAAAT	.	.	.	END=6998995;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999132:3,3:3-3,3-3:13,9,0,2:3,13:2,2:142.538:326.675,113.385:0.0,0.0:6e-45,0.000369236,0.999636
-chr1	7000338	.	AATAAATAAATAAATAAATAAATA	.	.	.	END=7000361;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999853:6,6:6-6,6-6:16,8,0,4:6,16:3,1|4,1|5,2:169.898:326.675,113.385:0.0,0.0:4.152e-42,6.63619e-05,0.999934
-chr1	7002437	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7002468;RU=ga;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.731673:16,16:12-16,12-16:17,17,0,0:15,4|16,13:NULL:248.743:326.675,113.385:1.0297,1.0297:1.31245e-14,0.268042,0.731961
-chr1	7002484	.	GAAAGGAAAGGAAAG	.	.	.	END=7002498;RU=gaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:213.569:326.675,113.385:0.0,0.0:0.0,1.18702e-05,0.999987
-chr1	7003509	.	TATATATATATA	.	.	.	END=7003520;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996778:6,6:6-6,6-6:12,13,0,0:6,12:NULL:167.642:326.675,113.385:0.0,0.0:1.43452e-21,0.00203514,0.997973
-chr1	7004299	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7004318;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:4,4:3-4,3-4:17,9,0,3:4,17:3,3:174.62:326.675,113.385:0.35561,0.35561:0.0,1.85123e-05,0.999985
-chr1	7004803	.	CACACACACACACACACACACACACACACA	.	.	.	END=7004832;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.706049:15,15:14-15,14-15:16,20,0,22:14,4|15,12:5,4|6,4|7,2|8,2|9,1|10,4|11,1|12,1|14,3:434.637:326.675,113.385:0.442564,0.442564:8.53683e-14,0.293692,0.706312
-chr1	7005829	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=7005885;RU=tgt;PERIOD=3;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997035:19,19:18-19,18-19:12,12,0,16:19,12:5,2|6,1|7,2|12,2|13,1|14,1|15,2|16,3|18,2:284.233:326.675,113.385:0.169767,0.169767:2.05796e-21,0.00117709,0.998829
-chr1	7006807	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7006830;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.975827:6,6:6-6,6-6:8,10,0,5:6,8:2,1|4,2|5,2:156.199:326.675,113.385:0.0,0.0:1.54873e-27,0.0118326,0.988195
-chr1	7006964	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=7007007;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.758626:11,11:11-11,11-11:5,5,0,7:11,5:2,1|4,1|6,1|7,1|8,1|9,2:116.354:326.675,113.385:0.0990099,0.0990099:1.36893e-12,0.116742,0.88336
-chr1	7008700	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=7008763;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.508596:16,16:13-16,13-16:4,10,0,8:16,4:5,1|6,3|7,2|8,1|10,1:169.954:326.675,113.385:0.772658,0.772658:4.78346e-09,0.374145,0.625905
-chr1	7009944	.	AACAACAACAAC	.	.	.	END=7009955;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994513:4,4:4-4,4-4:11,5,0,0:4,11:NULL:89.5565:326.675,113.385:0.0,0.0:6.90523e-37,0.0032162,0.996792
-chr1	7016143	.	ATGTTATGTTATGTT	.	.	.	END=7016157;RU=atgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,19,0,0:3,31:NULL:302.422:326.675,113.385:0.0,0.0:0.0,2.5526e-09,1.0
-chr1	7018592	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7018643;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.975679:25,28:25-34,28-32:10,12,0,25:25,5|28,5:4,1|5,1|6,1|7,1|11,1|17,2|18,1|20,4|21,2|22,2|23,3|24,2|25,2|27,1|32,1:382.265:326.675,113.385:3.4316,1.90016:1.06017e-15,0.977485,0.022559
-chr1	7022856	.	ACACACACACACACACACACACAC	.	.	.	END=7022879;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.830934:12,12:10-12,10-12:6,9,0,8:12,6:4,1|5,1|6,2|7,1|9,1|10,1|11,1:174.926:326.675,113.385:0.831212,0.831212:1.38565e-12,0.094323,0.905777
-chr1	7022880	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7022935;RU=ag;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.217122:28,32:26-30,26-32:3,11,0,9:28,3:6,1|8,1|18,1|21,1|23,1|26,2|27,1|29,1:192.037:326.675,113.385:0.717258,1.5095:5.02768e-11,0.00427917,0.995733
-chr1	7023312	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=7023410;RU=ctt;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0272976:34,34:11-34,11-34:0,15,0,15:NULL:6,1|7,2|13,2|15,1|18,1|20,1|21,1|22,1|23,1|28,1|32,1|33,1|34,1:257.589:326.675,113.385:10.0786,10.0786:9.48561e-16,0.620223,0.379835
-chr1	7025016	.	AACCAACCAACC	.	.	.	END=7025027;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,12,0,3:3,20:2,3:205.946:326.675,113.385:0.0,0.0:0.0,3.0456e-06,1.0
-chr1	7026416	.	TTTATTTTATTTTAT	.	.	.	END=7026430;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:168.583:326.675,113.385:0.0,0.0:0.0,3.49234e-07,1.0
-chr1	7028391	.	AATAAATAAATA	.	.	.	END=7028402;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:243.642:326.675,113.385:0.0,0.0:0.0,1.91427e-08,1.0
-chr1	7028876	.	TTTATTTATTTA	.	.	.	END=7028887;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999871:3,3:3-3,3-3:17,12,0,0:3,17:NULL:186.491:326.675,113.385:0.0,0.0:0.0,9.72933e-05,0.999903
-chr1	7029276	.	ACACACACACACACACACACACAC	.	.	.	END=7029299;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999972:12,12:12-14,12-14:18,20,0,15:12,18:5,3|6,2|7,2|9,4|10,2|11,2:383.754:326.675,113.385:0.617999,0.617999:4.03621e-28,1.31504e-05,0.999987
-chr1	7029315	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7029344;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,17,0,4:6,24:2,1|3,1|5,2:282.108:326.675,113.385:0.0,0.0:0.0,3.38642e-07,1.0
-chr1	7032756	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=7032799;RU=aata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989657:11,11:11-15,11-15:10,12,0,7:11,10:6,3|7,2|10,2:198.339:326.675,113.385:1.77026,1.77026:2.88596e-22,0.00340046,0.99661
-chr1	7032984	.	ACAAAAAAACAAAAAAACAAAAAA	.	.	.	END=7033007;RU=acaaaaaa;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99989:3,3:3-3,3-3:16,6,0,3:3,16:2,3:138.409:326.675,113.385:0.0,0.0:0.0,4.93539e-05,0.999955
-chr1	7033046	.	AGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	END=7033061;RU=agac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.338812:4,14:4-4,4-14:22,8,0,3:4,22:7,1|10,1|14,1:200.432:326.675,113.385:0.0,3.25928:0.0,5.07546e-22,1.0
-chr1	7033993	.	TATATATATATA	.	.	.	END=7034004;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998488:6,6:6-6,6-6:13,16,0,0:6,13:NULL:199.889:326.675,113.385:0.0,0.0:8.53176e-25,0.000960543,0.999043
-chr1	7035493	.	CACACACACACACACACACACACACACACACACACACA	.	.	.	END=7035530;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.607126:19,19:18-19,18-19:14,10,0,10:18,4|19,10:7,1|8,1|10,1|11,2|12,1|13,2|17,1|19,1:245.262:326.675,113.385:0.481803,0.481803:1.87697e-18,0.391868,0.608193
-chr1	7035536	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7035569;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.572888:17,17:17-18,17-18:20,10,0,3:16,3|17,14|18,3:5,1|8,1|13,1:222.459:326.675,113.385:0.475866,0.475866:2.53131e-18,0.000967349,0.999036
-chr1	7038709	.	AAATAAATAAAT	.	.	.	END=7038720;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.928445:3,3:3-3,3-3:7,1,0,0:3,7:NULL:37.2692:326.675,113.385:0.0,0.0:7.60169e-21,0.0294883,0.970568
-chr1	7038726	.	TAAATAAATAAATAAATAAATAAATAAATAAATAAA	.	.	.	END=7038761;RU=taaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.726846:9,9:9-9,9-9:5,2,0,2:9,5:3,1|5,1:53.6287:326.675,113.385:0.0,0.0:5.87215e-13,0.144436,0.855649
-chr1	7039465	.	TATATATATATATATATATATATATATATATA	.	.	.	END=7039496;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.265955:16,16:4-16,4-16:5,5,0,0:16,5:NULL:74.2867:326.675,113.385:3.94882,3.94882:4.58141e-07,0.622396,0.377661
-chr1	7046294	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	.	.	.	END=7046333;RU=aaat;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:10,10:9-10,9-10:19,23,0,11:10,19:3,1|4,2|6,2|7,1|8,3|9,2:380.597:326.675,113.385:0.236383,0.236383:0.0,1.23677e-05,0.999987
-chr1	7046658	.	AATAAATAAATAAATA	.	.	.	END=7046673;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.971748:4,4:4-4,4-4:9,17,0,0:4,9:NULL:183.662:326.675,113.385:0.0,0.0:7.18699e-20,0.0220878,0.977957
-chr1	7047632	.	ATTATTATTATT	.	.	.	END=7047643;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999909:4,4:4-4,4-4:17,6,0,0:4,17:NULL:120.143:326.675,113.385:0.0,0.0:0.0,5.72559e-05,0.999942
-chr1	7047891	.	TAATATAATATAATATAATATAATA	.	.	.	END=7047915;RU=taata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997731:5,5:5-5,5-5:12,10,0,4:5,12:2,1|3,1|4,2:170.786:326.675,113.385:0.0,0.0:5.98175e-27,0.00149521,0.998511
-chr1	7050067	.	AAATAAATAAATAAAT	.	.	.	END=7050082;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999941:4,4:2-4,2-4:17,8,0,2:4,17:3,2:157.568:326.675,113.385:0.694341,0.694341:0.0,2.86342e-05,0.999972
-chr1	7052312	.	TTTCTTTCTTTC	.	.	.	END=7052323;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.089:326.675,113.385:0.0,0.0:0.0,9.44406e-08,1.0
-chr1	7068379	.	CCCCCCACCCCCCACCCCCCA	CCCCCCA	.	.	END=7068399;RU=cccccca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0466103:1,1:1-3,1-3:0,3,0,0:NULL:NULL:26.5653:326.675,113.385:0.913899,0.913899:0.162367,0.48561,0.352167
-chr1	7069168	.	TGTGTGTGTGTGTG	.	.	.	END=7069181;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999851:7,7:6-7,6-7:16,14,0,2:7,16:6,2:203.023:326.675,113.385:0.345543,0.345543:3.63253e-33,8.08638e-05,0.999919
-chr1	7069209	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7069246;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993181:19,19:19-19,19-19:15,12,0,12:18,2|19,13:7,1|10,1|11,2|12,1|13,2|15,2|16,1|17,2:271.882:326.675,113.385:0.139319,0.139319:9.11502e-17,0.00584253,0.994173
-chr1	7071018	.	TTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=7071053;RU=tta;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979369:12,12:12-12,12-12:9,12,0,5:12,9:5,1|9,1|10,1|11,2:189.892:326.675,113.385:0.0,0.0:7.30704e-17,0.0105619,0.989462
-chr1	7072179	.	TTTGTTTGTTTG	.	.	.	END=7072190;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:37,15,0,0:3,37:NULL:289.246:326.675,113.385:0.0,0.0:0.0,4.57678e-11,1.0
-chr1	7086512	.	TCCTTCCTTCCT	.	.	.	END=7086523;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,15,0,0:3,19:NULL:209.826:326.675,113.385:0.0,0.0:0.0,9.0128e-06,0.999994
-chr1	7087714	.	TATATATATATATATATA	TATATATATATATATA	.	.	END=7087731;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.933757:8,9:8-9,9-9:11,3,0,0:8,3|9,8:NULL:78.6639:326.675,113.385:0.478946,0.0:1.99405e-08,0.934517,0.0655771
-chr1	7088366	.	AAACAAACAAACAAAC	.	.	.	END=7088381;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,8,0,2:4,23:2,1|3,1:183.097:326.675,113.385:0.139319,0.139319:0.0,4.63816e-07,1.0
-chr1	7089402	.	AGGAGGAGGAGG	.	.	.	END=7089413;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999212:4,4:4-4,4-4:14,9,0,0:4,14:NULL:136.969:326.675,113.385:0.0,0.0:0.0,0.00055484,0.999447
-chr1	7091385	.	ATCATCATCATCATC	.	.	.	END=7091399;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:5,5:5-5,5-5:18,7,0,0:5,18:NULL:140.115:326.675,113.385:0.0,0.0:0.0,1.96216e-05,0.99998
-chr1	7091399	.	CACCACCACCACCAC	.	.	.	END=7091413;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:5,5:5-5,5-5:18,6,0,0:5,18:NULL:130.27:326.675,113.385:0.0,0.0:0.0,2.13014e-05,0.999979
-chr1	7097340	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7097369;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979289:15,15:14-15,14-15:12,12,0,9:14,2|15,10:7,1|9,2|10,1|12,1|13,1|14,2|15,1:238.408:326.675,113.385:0.352842,0.352842:2.76799e-20,0.016334,0.983702
-chr1	7097804	.	ATAATAATAATA	.	.	.	END=7097815;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999954:4,4:4-4,4-4:17,8,0,4:4,17:3,3|4,1:169.671:326.675,113.385:0.0,0.0:0.0,1.21917e-05,0.999987
-chr1	7099389	.	ATTTATTTATTTATTTATTTATTT	.	.	.	END=7099412;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99991:6,6:6-6,6-6:17,6,0,3:6,17:3,2|4,1:150.344:326.675,113.385:0.0,0.0:1.42e-42,5.46034e-05,0.999948
-chr1	7099628	.	TGTGTGTGTGTG	.	.	.	END=7099639;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-7,6-7:49,14,0,9:5,2|6,47:4,3|5,5|7,1:422.624:326.675,113.385:0.431574,0.431574:0.0,5.61873e-11,1.0
-chr1	7099942	.	ATGTATGTATGTATGTATGT	.	.	.	END=7099961;RU=atgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:35,26,0,7:5,35:2,1|3,2|4,4:429.734:326.675,113.385:0.0,0.0:0.0,9.13639e-11,1.0
-chr1	7101482	.	TTGTTGTTGTTGTTG	.	.	.	END=7101496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,11,0,3:5,25:4,3:224.371:326.675,113.385:0.0,0.0:0.0,7.60404e-08,1.0
-chr1	7101721	.	AACAACAACAAC	.	.	.	END=7101732;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,15,0,3:4,26:3,3:260.772:326.675,113.385:0.0,0.0:0.0,4.34561e-08,1.0
-chr1	7102309	.	CAACAACAACAACAACAA	.	.	.	END=7102326;RU=caa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977648:6,6:6-6,6-6:9,14,0,2:6,9:4,1|5,1:178.927:326.675,113.385:0.0,0.0:7.69728e-23,0.0128845,0.987142
-chr1	7112567	.	TGCTTGCTTGCT	.	.	.	END=7112578;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.610326:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.7523:326.675,113.385:0.0,0.0:3.60438e-13,0.15294,0.847136
-chr1	7112580	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=7112635;RU=tccc;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0395119:9,9:4-9,4-9:0,1,0,6:NULL:3,2|4,2|7,1|8,1:51.8568:326.675,113.385:1.05556,1.05556:1.0,0.0,0.0
-chr1	7112643	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7112706;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0231414:17,17:11-17,11-17:0,1,0,3:NULL:5,1|16,1|17,1:30.1058:326.675,113.385:2.17123,2.17123:1.44707e-15,0.562026,0.438073
-chr1	7114417	.	TATTTATTTATT	.	.	.	END=7114428;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999531:3,3:3-3,3-3:14,12,0,3:3,14:2,3:194.42:326.675,113.385:0.0,0.0:0.0,0.000209233,0.999795
-chr1	7114880	.	GTTTGTTTGTTT	.	.	.	END=7114891;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,10,0,2:3,39:2,2:260.0:326.675,113.385:0.0,0.0:0.0,5.14724e-12,1.0
-chr1	7114905	.	TGCCTGCCTGCCTGCCTGCC	.	.	.	END=7114924;RU=tgcc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:32,19,0,9:5,32:3,5|4,4:364.328:326.675,113.385:0.0,0.0:0.0,7.61377e-10,1.0
-chr1	7114923	.	CCTTCCTTCCTT	.	.	.	END=7114934;RU=cctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:294.268:326.675,113.385:0.0,0.0:0.0,1.28063e-10,1.0
-chr1	7115852	.	CAACAACAACAA	.	.	.	END=7115863;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-10,4-10:21,16,0,0:4,21:NULL:229.452:326.675,113.385:2.98215,2.98215:0.0,5.39507e-06,0.999995
-chr1	7115879	.	AACCAACCAACCAACCAACC	.	.	.	END=7115898;RU=aacc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999855:5,5:5-5,5-5:16,15,0,3:5,16:2,2|4,1:224.039:326.675,113.385:0.0,0.0:0.0,0.000123741,0.999879
-chr1	7116409	.	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7116432;RU=ttg;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:20,13,0,5:8,20:5,1|6,3|7,1:239.316:326.675,113.385:0.0,0.0:0.0,4.78065e-06,0.999995
-chr1	7117084	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=7117101;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99988:6,6:6-6,6-6:16,11,0,3:6,16:5,3:187.085:326.675,113.385:0.0,0.0:4.64e-43,5.67073e-05,0.999947
-chr1	7123652	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATA	.	.	END=7123683;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0176259:14,14:14-16,14-16:0,2,0,0:NULL:NULL:18.051:326.675,113.385:0.668445,0.668445:0.262568,0.499919,0.237526
-chr1	7123681	.	ATAGATAGATAGATAG	.	.	.	END=7123696;RU=atag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.467441:4,4:4-4,4-4:3,3,0,2:4,3:3,2:52.7516:326.675,113.385:0.139319,0.139319:7.90252e-07,0.195937,0.804113
-chr1	7127713	.	ATGCATGCATGC	.	.	.	END=7127724;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999502:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.86:326.675,113.385:0.0,0.0:0.0,0.000298726,0.999704
-chr1	7129508	.	GCCTGCCTGCCT	.	.	.	END=7129519;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:188.359:326.675,113.385:0.0,0.0:0.0,8.97093e-07,1.0
-chr1	7129995	.	AGCAGCAGCAGC	.	.	.	END=7130006;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:40,14,0,0:4,40:NULL:287.299:326.675,113.385:0.0,0.0:0.0,8.80671e-12,1.0
-chr1	7138899	.	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	.	.	.	END=7138976;RU=cctctc;PERIOD=6;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.611322:13,13:11-13,11-13:4,15,0,22:13,4:3,2|4,5|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2:308.531:326.675,113.385:0.474835,0.474835:6.11111e-08,0.261255,0.738746
-chr1	7139015	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7139054;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.615788:20,22:20-20,19-22:21,16,0,15:19,6|20,15:7,1|9,1|10,1|12,1|14,4|16,1|17,2|19,3|22,1:384.84:326.675,113.385:0.0,1.01136:3.32272e-17,0.000540725,0.999462
-chr1	7139855	.	CAACAACAACAA	.	.	.	END=7139866;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:29,22,0,2:4,29:3,2:332.281:326.675,113.385:0.0,0.0:0.0,8.94474e-09,1.0
-chr1	7141910	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7141955;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.828414:23,23:20-23,20-23:9,33,0,35:22,2|23,7:5,2|6,2|8,2|9,5|10,2|12,1|13,3|14,9|16,1|18,2|19,2|20,1|21,1|22,1|23,1:617.134:326.675,113.385:1.08749,1.08749:7.09369e-14,0.154714,0.845364
-chr1	7142903	.	TTTATTTATTTA	.	.	.	END=7142914;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-4,3-4:21,3,0,0:3,21:NULL:110.108:326.675,113.385:0.298675,0.298675:0.0,2.16394e-06,1.0
-chr1	7149749	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=7149768;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:33,18,0,9:10,33:5,2|6,2|7,2|9,3:372.271:326.675,113.385:0.0,0.0:0.0,1.25285e-09,1.0
-chr1	7150526	.	CAGCCAGCCAGC	.	.	.	END=7150537;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:42,13,0,0:3,42:NULL:281.387:326.675,113.385:0.0,0.0:0.0,1.12619e-12,1.0
-chr1	7151580	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7151625;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.948189:22,23:21-23,22-23:10,15,0,21:21,2|22,3|23,5:5,2|7,1|8,1|11,2|12,2|13,2|14,3|15,1|17,1|19,1|20,1|22,4:357.742:326.675,113.385:0.554102,0.317759:0.00154081,0.961704,0.0368281
-chr1	7152237	.	GTTGTTGTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=7152266;RU=gtt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:24,11,0,7:10,24:3,1|6,1|8,2|9,3:248.698:326.675,113.385:0.0,0.0:0.0,2.10796e-07,1.0
-chr1	7157339	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7157358;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999938:4,4:4-4,4-4:17,12,0,2:4,17:3,2:192.613:326.675,113.385:0.0,0.0:0.0,4.32609e-05,0.999957
-chr1	7157442	.	TTTTGGTTTTTGGTTTTTGGT	.	.	.	END=7157462;RU=ttttggt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:175.786:326.675,113.385:0.0,0.0:0.0,8.52949e-06,0.999994
-chr1	7157813	.	CAAACAAACAAACAAA	.	.	.	END=7157828;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,24,0,5:4,23:3,5:345.664:326.675,113.385:0.0,0.0:0.0,5.28929e-07,1.0
-chr1	7164237	.	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	.	.	.	END=7164331;RU=tctct;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.134004:19,19:11-19,11-19:2,20,0,17:19,2:3,2|5,1|6,1|7,3|8,1|9,1|10,1|12,1|13,1|14,2|15,2|18,1:316.316:326.675,113.385:2.63675,2.63675:0.000196628,0.75379,0.246027
-chr1	7165649	.	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	.	END=7165672;RU=tttgtt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997965:4,4:4-4,4-4:11,22,0,5:4,11:3,5:280.981:326.675,113.385:0.0,0.0:2.16762e-36,0.00154586,0.998459
-chr1	7167675	.	TTTGTTTGTTTG	.	.	.	END=7167686;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999928:3,3:3-3,3-3:17,3,0,0:3,17:NULL:92.8925:326.675,113.385:0.0,0.0:0.0,3.49392e-05,0.999964
-chr1	7172621	.	AAAAGAAAAGAAAAG	.	.	.	END=7172635;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,9,0,2:3,30:2,2:218.999:326.675,113.385:0.0,0.0:0.0,3.21717e-09,1.0
-chr1	7173577	.	ACACACACACAC	.	.	.	END=7173588;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:35,13,0,0:6,35:NULL:256.223:326.675,113.385:0.0990099,0.0990099:0.0,3.04857e-10,1.0
-chr1	7179754	.	AATAATAATAATAAT	.	.	.	END=7179768;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998277:5,5:4-5,4-5:12,11,0,2:5,12:4,2:166.309:326.675,113.385:0.36513,0.36513:2.64615e-31,0.00105222,0.998952
-chr1	7183424	.	AAGAAAGAAAGAAAGA	.	.	.	END=7183439;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,9,0,3:4,35:2,1|3,2:247.573:326.675,113.385:0.0,0.0:0.0,9.05384e-11,1.0
-chr1	7187849	.	TGTGTGTGTGTGTG	.	.	.	END=7187862;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999325:7,7:7-7,7-7:14,9,0,0:7,14:NULL:139.81:326.675,113.385:0.0,0.0:6.28781e-31,0.000398072,0.999605
-chr1	7189612	.	AATCAATCAATC	.	.	.	END=7189623;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-4,3-4:19,6,0,0:3,19:NULL:132.971:326.675,113.385:0.382696,0.382696:0.0,1.15177e-05,0.999987
-chr1	7196731	.	GGGTGGGTGGGT	.	.	.	END=7196742;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.265731:3,3:2-6,2-6:2,21,0,0:3,2:NULL:186.44:326.675,113.385:0.686818,0.686818:5.23069e-06,0.314433,0.685577
-chr1	7200628	.	TATTTATTTATT	.	.	.	END=7200639;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.93621:3,3:3-3,3-3:7,4,0,0:3,7:NULL:63.2243:326.675,113.385:0.0,0.0:1.08546e-20,0.0320985,0.967963
-chr1	7202878	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7202915;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.474592:19,19:19-20,19-20:11,19,0,16:19,9|20,2:4,1|6,1|8,2|9,1|11,4|13,2|16,1|17,2|18,2:353.673:326.675,113.385:0.478127,0.478127:1.97729e-13,0.00220667,0.997799
-chr1	7211598	.	TTAATTAATTAA	.	.	.	END=7211609;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999911:3,3:3-3,3-3:16,6,0,0:3,16:NULL:121.627:326.675,113.385:0.0,0.0:0.0,5.47336e-05,0.999948
-chr1	7211666	.	TTTATTTATTTA	.	.	.	END=7211677;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,18,0,0:3,22:NULL:247.566:326.675,113.385:0.0,0.0:0.0,1.2383e-06,1.0
-chr1	7211691	.	ATTGATTGATTG	.	.	.	END=7211702;RU=attg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,16,0,2:3,29:2,2:269.281:326.675,113.385:0.0,0.0:0.0,6.33694e-09,1.0
-chr1	7217580	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=7217607;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.860925:14,14:10-15,10-15:7,15,0,4:14,7:6,1|9,1|10,1|12,1:198.8:326.675,113.385:2.02736,2.02736:1.63669e-09,0.0777891,0.922306
-chr1	7219811	.	ACACACACACACACACACACACACACAC	.	.	.	END=7219838;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:14,14:14-14,14-14:18,8,0,9:14,18:6,1|7,3|8,2|9,2|14,1:222.087:326.675,113.385:0.0990099,0.0990099:1.05852e-33,3.29776e-05,0.99997
-chr1	7226245	.	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	.	.	.	END=7226304;RU=ggcagg;PERIOD=6;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.550706:10,10:3-10,3-10:3,20,0,13:10,3:2,1|3,1|4,2|6,1|7,1|8,3|9,4:288.409:326.675,113.385:1.81796,1.81796:2.69798e-05,0.369363,0.630662
-chr1	7227370	.	AAATAAAATAAAATAAAATAAAATA	.	.	.	END=7227394;RU=aaata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,10,0,4:5,23:3,2|4,2:209.855:326.675,113.385:0.0,0.0:0.0,4.30756e-07,1.0
-chr1	7240279	.	ATTTATTTATTT	.	.	.	END=7240290;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:153.32:326.675,113.385:0.0,0.0:0.0,1.07333e-05,0.999993
-chr1	7240750	.	ATGCATGCATGC	.	.	.	END=7240761;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997102:3,3:3-3,3-3:12,9,0,0:3,12:NULL:128.833:326.675,113.385:0.0,0.0:1.46053e-35,0.00175663,0.998247
-chr1	7241788	.	TCTCTCTCTCTCTC	.	.	.	END=7241801;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99991:7,7:7-7,7-7:17,4,0,0:7,17:NULL:106.626:326.675,113.385:0.0,0.0:1.80641e-38,5.65364e-05,0.999947
-chr1	7245079	.	ATAATAATAATA	.	.	.	END=7245090;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.946898:4,4:4-4,4-4:8,13,0,0:4,8:NULL:150.095:326.675,113.385:0.0,0.0:7.85469e-21,0.0389249,0.961143
-chr1	7247751	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7247798;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.312892:24,29:12-24,12-29:5,11,0,13:24,5:6,2|7,1|8,1|9,1|10,1|12,1|13,2|15,1|19,1|21,1|29,1:231.449:326.675,113.385:4.3687,7.89588:8.50332e-13,1.16424e-06,1.0
-chr1	7253471	.	TAAATAAATAAA	.	.	.	END=7253482;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995584:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.4252:326.675,113.385:0.0,0.0:3.59897e-33,0.00242419,0.997585
-chr1	7253491	.	ATATATATATATAT	.	.	.	END=7253504;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999227:7,7:7-7,7-7:14,5,0,0:7,14:NULL:101.671:326.675,113.385:0.0,0.0:1.73846e-27,0.000431609,0.999569
-chr1	7254256	.	CCCACCCACCCA	.	.	.	END=7254267;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999886:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.393:326.675,113.385:0.0,0.0:0.0,7.30345e-05,0.999926
-chr1	7256849	.	ATTTATTTATTT	.	.	.	END=7256860;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:241.71:326.675,113.385:0.0,0.0:0.0,1.21702e-08,1.0
-chr1	7260017	.	TATTATTATTATTATTATTATTATTAT	.	.	.	END=7260043;RU=tat;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999432:9,9:9-10,9-10:15,13,0,5:9,15:4,2|6,1|8,2:225.477:326.675,113.385:0.322657,0.322657:6.9475e-26,0.000247089,0.999757
-chr1	7267550	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7267573;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999214:12,12:11-12,11-12:24,10,0,8:11,3|12,21:7,1|8,1|9,2|10,2|11,2:263.425:326.675,113.385:0.169767,0.169767:3.8886e-28,0.000792244,0.999211
-chr1	7269602	.	TGTTTGTTTGTT	.	.	.	END=7269613;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,23,0,0:3,30:NULL:328.499:326.675,113.385:0.0,0.0:0.0,1.00681e-08,1.0
-chr1	7269942	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7269983;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.957569:21,21:21-22,21-22:21,21,0,14:19,2|21,16|22,3:4,1|5,2|6,2|7,1|11,2|13,1|14,1|15,2|17,1|18,1:410.119:326.675,113.385:0.480581,0.480581:1.11615e-18,0.00176366,0.99824
-chr1	7281471	.	AGCAGCAGCAGC	.	.	.	END=7281482;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,12,0,2:4,27:3,2:231.62:326.675,113.385:0.0,0.0:0.0,4.11805e-08,1.0
-chr1	7281705	.	ACCCACCCACCC	.	.	.	END=7281716;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994423:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.602:326.675,113.385:0.0,0.0:1.21422e-32,0.00349456,0.996513
-chr1	7287856	.	CTGCTGCTGCTG	.	.	.	END=7287867;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,19,0,2:4,28:3,2:295.475:326.675,113.385:0.0,0.0:0.0,1.55583e-08,1.0
-chr1	7289516	.	AACAACAACAACAACAACAACAAC	.	.	.	END=7289539;RU=aac;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:32,21,0,10:8,32:4,3|5,2|6,1|7,4:395.626:326.675,113.385:0.0,0.0:0.0,7.39514e-10,1.0
-chr1	7295421	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=7295444;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985667:6,6:6-6,6-6:10,8,0,2:6,10:2,1|3,1:133.664:326.675,113.385:0.0,0.0:8.02214e-25,0.0101885,0.989835
-chr1	7300043	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7300082;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.271667:20,31:20-21,20-33:5,14,0,11:20,5:7,1|8,2|10,2|11,1|13,1|15,1|16,1|18,1|30,1:249.731:326.675,113.385:0.311527,5.17131:1.2747e-12,9.41717e-07,1.0
-chr1	7308819	.	CTTCCTTCCTTC	.	.	.	END=7308830;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:176.634:326.675,113.385:0.0,0.0:0.0,5.62191e-06,0.999995
-chr1	7311860	.	AATAAATAAATA	.	.	.	END=7311871;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.639:326.675,113.385:0.0,0.0:0.0,3.8687e-06,1.0
-chr1	7312335	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7312382;RU=ga;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.366625:24,24:21-25,21-25:4,11,0,7:24,4:4,1|9,1|13,1|19,2|20,2:184.691:326.675,113.385:1.32681,1.32681:3.50187e-05,0.22487,0.775126
-chr1	7317649	.	TATATATATATATATATATATATATATATATATA	.	.	.	END=7317682;RU=ta;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.214537:17,17:12-17,12-17:3,1,0,0:17,3:NULL:23.9926:326.675,113.385:2.46433,2.46433:0.000415716,0.495034,0.504577
-chr1	7319965	.	TGTTTTGTTTTGTTT	.	.	.	END=7319979;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.419:326.675,113.385:0.0,0.0:0.0,1.10491e-08,1.0
-chr1	7320026	.	CAACAACAACAA	.	.	.	END=7320037;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,8,0,2:4,35:3,2:219.811:326.675,113.385:0.0,0.0:0.0,1.13476e-10,1.0
-chr1	7320521	.	TACATACATACA	.	.	.	END=7320532;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999363:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.282:326.675,113.385:0.0,0.0:0.0,0.000375133,0.999628
-chr1	7321482	.	ACACACACACACAC	.	.	.	END=7321495;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:7,7:6-7,6-7:17,16,0,2:7,17:5,1|6,1:226.164:326.675,113.385:0.169767,0.169767:3.24696e-33,4.78734e-05,0.999955
-chr1	7322714	.	CCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTC	.	.	.	END=7322755;RU=cccttc;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.961654:7,7:7-11,7-11:9,0,0,3:7,9:3,1|4,2:58.7664:326.675,113.385:1.93776,1.93776:1.54565e-21,0.0115338,0.988493
-chr1	7322758	.	CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	CCCTCCCTCCCTCCCTCCCTCCCTCCCT	.	.	END=7322825;RU=ccct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.034616:7,7:4-7,4-7:0,0,0,3:NULL:4,1|5,1|7,1:21.8234:326.675,113.385:1.0297,1.0297:1.0,0.0,0.0
-chr1	7322843	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	.	END=7322906;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.392285:16,16:16-16,16-16:3,0,0,3:16,3:3,1|5,1|9,1:35.5546:326.675,113.385:0.0,0.0:3.24348e-05,0.308657,0.691323
-chr1	7328752	.	ACCCACCCACCC	.	.	.	END=7328763;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.757354:3,3:3-3,3-3:5,6,0,0:3,5:NULL:74.6943:326.675,113.385:0.19802,0.19802:2.47669e-12,0.128837,0.871257
-chr1	7336314	.	TTTGTTTGTTTGTTTG	.	.	.	END=7336329;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,15,0,4:4,23:3,4:255.565:326.675,113.385:0.0,0.0:0.0,3.73456e-07,1.0
-chr1	7336498	.	TTGCTTGCTTGC	.	.	.	END=7336509;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:287.118:326.675,113.385:0.0,0.0:0.0,8.91218e-08,1.0
-chr1	7338572	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7338615;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.775999:22,22:15-23,15-23:9,13,0,2:21,2|22,7:8,1|18,1:187.222:326.675,113.385:3.54718,3.54718:4.10557e-09,0.194642,0.805411
-chr1	7338650	.	GAGAGAGAGAGA	.	.	.	END=7338661;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.677083:6,6:5-6,5-6:16,15,0,0:5,2|6,14:NULL:213.658:326.675,113.385:0.481803,0.481803:3.46657e-31,0.322893,0.677118
-chr1	7339588	.	GGAGGGAGGGAG	.	.	.	END=7339599;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.179:326.675,113.385:0.0,0.0:0.0,1.76217e-07,1.0
-chr1	7342098	.	CTTCCTTCCTTC	.	.	.	END=7342109;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:140.672:326.675,113.385:0.0,0.0:0.0,3.06032e-06,1.0
-chr1	7346787	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7346820;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.820877:17,18:17-17,17-18:14,14,0,11:17,11|18,3:6,1|8,1|9,1|10,1|12,4|16,3:286.675:326.675,113.385:0.0,0.51751:2.57552e-17,0.000174086,0.999827
-chr1	7348276	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	.	END=7348327;RU=ctcc;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.299182:13,13:6-13,6-13:3,7,0,10:13,3:2,2|4,2|5,1|6,1|7,1|9,3:147.626:326.675,113.385:3.34451,3.34451:3.97709e-07,0.52238,0.477716
-chr1	7358397	.	GAACGAACGAAC	.	.	.	END=7358408;RU=gaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:3,3:2-3,2-3:18,17,0,0:3,18:NULL:228.634:326.675,113.385:0.382696,0.382696:0.0,2.71399e-05,0.999972
-chr1	7358417	.	GGAGGGAGGGAG	.	.	.	END=7358428;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:3,3:3-3,3-3:18,15,0,3:3,18:2,3:231.967:326.675,113.385:0.0,0.0:0.0,1.52545e-05,0.999986
-chr1	7358698	.	GTGTGTGTGTGTGT	.	.	.	END=7358711;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:20,19,0,3:7,20:5,3:276.71:326.675,113.385:0.0,0.0:3.9e-44,6.48288e-06,0.999995
-chr1	7360103	.	GCTGGCTGGCTG	.	.	.	END=7360114;RU=gctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,19,0,2:3,20:2,2:266.982:326.675,113.385:0.0,0.0:0.0,8.91998e-06,0.999994
-chr1	7364232	.	AACAACAACAACAACAACAACAACAAC	.	.	.	END=7364258;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998618:9,9:4-9,4-9:23,4,0,9:8,2|9,21:4,2|5,3|7,1|8,3:207.845:326.675,113.385:1.27865,1.27865:0.0,0.00139733,0.998609
-chr1	7369828	.	TTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGT	.	.	.	END=7369877;RU=ttggt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983934:10,10:10-10,10-10:10,17,0,15:10,10:2,1|3,2|4,1|5,4|6,3|8,4:309.264:326.675,113.385:0.0,0.0:4.08607e-26,0.0115998,0.988427
-chr1	7370253	.	TCTATCTATCTATCTATCTATCTATCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7370288;RU=tcta;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.987571:10,10:9-10,9-10:10,15,0,6:10,10:3,2|6,1|9,3:229.725:326.675,113.385:0.382696,0.382696:0.0,0.00361669,0.996391
-chr1	7372684	.	GTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7372697;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.275371:7,17:7-7,6-17:20,4,0,2:6,2|7,18:5,1|17,1:155.27:326.675,113.385:0.0,4.95623:4.12548e-36,0.000283499,0.99972
-chr1	7373113	.	AATAATAATAAT	.	.	.	END=7373124;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999906:4,4:4-4,4-4:17,3,0,0:4,17:NULL:97.0953:326.675,113.385:0.0,0.0:1.44e-43,6.04494e-05,0.999941
-chr1	7374196	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7374220;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:29,5,0,6:5,29:4,6:207.505:326.675,113.385:0.0,0.0:0.0,5.08972e-09,1.0
-chr1	7375130	.	AAGAAGAAGAAG	.	.	.	END=7375141;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:4,4:3-4,3-4:19,7,0,0:4,19:NULL:139.553:326.675,113.385:0.236383,0.236383:0.0,1.34472e-05,0.999987
-chr1	7377589	.	GTGTGTGTGTGT	.	.	.	END=7377600;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:6,6:6-6,6-6:18,13,0,2:6,18:5,2:200.378:326.675,113.385:0.0,0.0:1e-45,1.50686e-05,0.999986
-chr1	7378672	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7378691;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999944:5,5:5-5,5-5:17,7,0,3:5,17:3,1|4,2:158.67:326.675,113.385:0.0,0.0:0.0,2.59651e-05,0.999978
-chr1	7379008	.	GTGTGTGTGTGT	.	.	.	END=7379019;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997376:6,6:2-6,2-6:22,11,0,2:5,2|6,20:4,1|5,1:210.677:326.675,113.385:1.55789,1.55789:2.05557e-35,0.00263789,0.997368
-chr1	7379032	.	CACACACACACACACACACACACACACA	.	.	.	END=7379059;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999089:14,14:10-14,10-14:22,10,0,6:13,3|14,19:6,1|7,1|8,1|10,2|11,1:238.742:326.675,113.385:1.24776,1.24776:1.8e-21,0.000919131,0.999082
-chr1	7382087	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7382106;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993888:4,4:4-4,4-4:11,8,0,0:4,11:NULL:112.713:326.675,113.385:0.0,0.0:4.26474e-36,0.00449055,0.995522
-chr1	7384157	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA	.	.	END=7384198;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.746418:21,22:21-21,21-22:16,17,0,18:21,12|22,4:5,1|6,2|9,1|10,1|11,1|12,2|13,3|14,1|16,2|18,2|20,2:378.127:326.675,113.385:0.0,0.538126:1.12812e-15,9.63829e-05,0.999903
-chr1	7385475	.	CAACAACAACAA	.	.	.	END=7385486;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99995:4,4:4-5,4-5:17,8,0,5:4,17:3,3|4,2:177.236:326.675,113.385:0.412766,0.412766:0.0,6.88485e-06,0.999994
-chr1	7385514	.	AAAACAAAACAAAAC	.	.	.	END=7385528;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:141.849:326.675,113.385:0.0,0.0:0.0,1.66293e-06,1.0
-chr1	7385949	.	ACAAAACAAAACAAAACAAA	.	.	.	END=7385968;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,8,0,0:4,21:NULL:161.162:326.675,113.385:0.0,0.0:0.0,5.3986e-06,0.999995
-chr1	7386148	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7386177;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990378:15,15:15-15,15-15:11,9,0,10:15,11:4,2|8,1|9,1|10,1|12,1|13,3|14,1:210.515:326.675,113.385:0.139319,0.139319:1.95257e-14,0.00320105,0.996807
-chr1	7389238	.	AAAACAAAACAAAAC	.	.	.	END=7389252;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996706:3,3:3-3,3-3:11,6,0,3:3,11:2,3:117.808:326.675,113.385:0.0,0.0:3.58095e-38,0.00114915,0.998854
-chr1	7389561	.	AACAACAACAAC	.	.	.	END=7389572;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.572521:4,4:4-4,4-4:4,4,0,0:4,4:NULL:50.0009:326.675,113.385:0.29703,0.29703:1.07314e-13,0.254933,0.745076
-chr1	7390007	.	ACACACACACAC	.	.	.	END=7390018;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.956369:6,6:6-6,6-6:8,4,0,0:6,8:NULL:64.5737:326.675,113.385:0.0,0.0:3.70441e-17,0.0228166,0.97723
-chr1	7390525	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7390544;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998138:4,4:4-4,4-4:12,5,0,2:4,12:3,2:102.812:326.675,113.385:0.0,0.0:4.38078e-36,0.000734944,0.99927
-chr1	7391902	.	AAACAAACAAAC	.	.	.	END=7391913;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.454772:3,3:1-3,1-3:3,6,0,0:3,3:NULL:64.9642:326.675,113.385:0.390054,0.390054:2.83571e-10,0.286577,0.713424
-chr1	7392178	.	ACACACACACACACACACACACACACAC	.	.	.	END=7392205;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.745438:14,14:13-14,13-14:14,12,0,6:13,3|14,11:5,1|6,1|9,1|10,2|11,1:220.514:326.675,113.385:0.469019,0.469019:1.61047e-11,0.254054,0.745954
-chr1	7392363	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7392394;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.293661:8,12:8-8,8-12:18,6,0,6:8,18:4,1|7,3|8,1|11,1:185.442:326.675,113.385:0.0,1.79249:0.0,1.26003e-08,1.0
-chr1	7393303	.	TAAATAAATAAATAAA	.	.	.	END=7393318;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.572755:4,4:4-4,4-4:4,1,0,0:4,4:NULL:24.6243:326.675,113.385:0.0,0.0:2.61914e-12,0.227011,0.773022
-chr1	7395935	.	TATATTATATTATAT	.	.	.	END=7395949;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990461:3,3:3-3,3-3:10,2,0,0:3,10:NULL:56.8744:326.675,113.385:0.0,0.0:3.51705e-29,0.00420052,0.995809
-chr1	7397361	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=7397400;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.904946:20,20:19-21,19-21:7,10,0,10:20,7:6,1|7,1|8,1|9,2|18,4|19,1:201.872:326.675,113.385:0.424474,0.424474:6.32146e-09,0.0305788,0.969479
-chr1	7398005	.	CCCGCCCGCCCG	.	.	.	END=7398016;RU=cccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.369:326.675,113.385:0.0,0.0:0.0,3.3594e-07,1.0
-chr1	7399995	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=7400022;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999872:7,7:2-7,2-7:16,7,0,5:7,16:2,1|3,1|4,1|6,2:168.405:326.675,113.385:2.26211,2.26211:6.47696e-40,7.5926e-05,0.999926
-chr1	7400995	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7401018;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:26,16,0,11:6,26:2,1|3,5|4,3|5,2:331.38:326.675,113.385:0.0,0.0:0.0,5.8558e-08,1.0
-chr1	7401260	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7401291;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:16,16:16-16,16-16:31,17,0,6:15,3|16,28:7,1|11,2|12,1|13,1|15,1:351.031:326.675,113.385:0.0,0.0:5.42445e-32,1.93846e-06,1.0
-chr1	7403154	.	ATTTATTTATTT	.	.	.	END=7403165;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:138.461:326.675,113.385:0.0,0.0:0.0,7.52932e-08,1.0
-chr1	7403493	.	ACACACACACACACAC	.	.	.	END=7403508;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99689:8,8:8-9,8-9:12,16,0,4:8,12:5,2|6,2:226.827:326.675,113.385:0.334882,0.334882:4.59965e-23,0.0016035,0.998404
-chr1	7403509	.	CCACCACCACCACCACCACCA	.	.	.	END=7403529;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99736:7,7:7-7,7-7:12,15,0,4:7,12:4,2|5,2:216.079:326.675,113.385:0.0,0.0:2.04253e-36,0.00152758,0.998475
-chr1	7403538	.	AAATAAATAAAT	.	.	.	END=7403549;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999353:3,3:3-3,3-3:14,12,0,0:3,14:NULL:167.036:326.675,113.385:0.0,0.0:1.7057e-41,0.000411744,0.999591
-chr1	7407348	.	TAATAATAATAATAATAA	.	.	.	END=7407365;RU=taa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999988:6,6:5-6,5-6:18,12,0,5:6,18:4,2|5,3:225.568:326.675,113.385:0.195027,0.195027:1.25e-43,9.64497e-06,0.999993
-chr1	7407486	.	TATATATATATA	.	.	.	END=7407497;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987407:6,6:6-6,6-6:10,13,0,0:6,10:NULL:161.381:326.675,113.385:0.0,0.0:6.72984e-18,0.00804479,0.991974
-chr1	7407553	.	ACACACACACAC	.	.	.	END=7407564;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,7,0,0:6,25:NULL:165.558:326.675,113.385:0.0,0.0:0.0,1.80849e-07,1.0
-chr1	7409238	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7409277;RU=aaaac;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982309:8,8:7-8,7-8:9,3,0,8:8,9:3,1|4,3|6,1|7,3:120.301:326.675,113.385:0.45695,0.45695:1.97341e-23,0.00575558,0.994257
-chr1	7410953	.	AGAAGAAGAAGA	.	.	.	END=7410964;RU=aga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998108:4,4:4-4,4-4:13,16,0,0:4,13:NULL:196.156:326.675,113.385:0.0,0.0:4.49557e-31,0.00144172,0.998564
-chr1	7416243	.	ATTTATTTATTT	.	.	.	END=7416254;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.715:326.675,113.385:0.0,0.0:0.0,4.6248e-07,1.0
-chr1	7421873	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7421914;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.686723:21,21:20-22,20-22:5,16,0,15:21,5:4,1|8,1|9,1|10,2|11,1|14,2|15,1|16,1|17,1|18,1|19,1|20,2:290.947:326.675,113.385:0.626507,0.626507:4.14178e-06,0.120716,0.879379
-chr1	7423553	.	TGGGTTGGGTTGGGT	.	.	.	END=7423567;RU=tgggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.697:326.675,113.385:0.0,0.0:0.0,2.56633e-06,1.0
-chr1	7423835	.	CCAGCCAGCCAG	.	.	.	END=7423846;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.014:326.675,113.385:0.0,0.0:0.0,8.03606e-06,0.999994
-chr1	7424052	.	ATATATATATATAT	.	.	.	END=7424065;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998037:7,7:6-8,6-8:13,10,0,0:7,13:NULL:137.626:326.675,113.385:0.344122,0.344122:1.78319e-21,0.00109507,0.998907
-chr1	7425278	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7425323;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.513251:23,23:21-27,21-27:20,24,0,18:21,3|22,4|23,11|24,2:5,4|9,1|10,1|11,3|14,2|15,4|19,1|20,2:473.466:326.675,113.385:1.61365,1.61365:3.31356e-10,0.476846,0.523247
-chr1	7426578	.	TCTTTCTTTCTT	.	.	.	END=7426589;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.924749:3,3:3-3,3-3:7,5,0,0:3,7:NULL:72.4247:326.675,113.385:0.0,0.0:1.24085e-20,0.0349296,0.965131
-chr1	7426730	.	TATATATATATATATATATATATATATATATATATATATATATATATA	TA	.	.	END=7426777;RU=ta;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.00195412:1,1:1-1,1-1:0,4,0,0:NULL:NULL:34.6221:326.675,113.385:0.0,0.0:0.371713,0.539518,0.0888731
-chr1	7431725	.	ATTATTATTATT	.	.	.	END=7431736;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,9,0,0:4,26:NULL:183.414:326.675,113.385:0.0,0.0:0.0,1.08437e-07,1.0
-chr1	7440876	.	TTCCTTCCTTCC	.	.	.	END=7440887;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:249.022:326.675,113.385:0.0,0.0:0.0,1.88782e-06,1.0
-chr1	7440950	.	AAACAAACAAAC	.	.	.	END=7440961;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:221.718:326.675,113.385:0.0,0.0:0.0,7.89085e-06,0.999994
-chr1	7444083	.	ATATATATATATAT	.	.	.	END=7444096;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.952448:7,7:7-7,7-7:8,2,0,0:7,8:NULL:49.8835:326.675,113.385:0.0,0.0:2.21982e-14,0.0249351,0.975111
-chr1	7447332	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7447355;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:27,7,0,5:6,27:2,2|3,1|4,1|5,1:210.645:326.675,113.385:0.0,0.0:0.0,4.00341e-08,1.0
-chr1	7449579	.	TCTGTCTCTGTCTCTGTCTCTGTC	.	.	.	END=7449602;RU=tctgtc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999342:4,4:3-4,3-4:15,13,0,0:4,15:NULL:180.716:326.675,113.385:0.311527,0.311527:6e-45,0.000577142,0.999424
-chr1	7450712	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7450769;RU=tc;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0285637:32,32:25-32,25-32:0,7,0,9:NULL:4,2|5,1|8,1|13,1|27,2|28,1|32,1:141.607:326.675,113.385:1.50058,1.50058:9.70053e-09,0.34967,0.650364
-chr1	7453756	.	AGCAGCAGCAGC	.	.	.	END=7453767;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,17,0,0:4,27:NULL:265.752:326.675,113.385:0.0,0.0:0.0,1.23179e-07,1.0
-chr1	7456598	.	TTTATTTATTTA	.	.	.	END=7456609;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999931:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.423:326.675,113.385:0.0,0.0:0.0,6.4736e-05,0.999939
-chr1	7460799	.	ATTTATTTATTT	.	.	.	END=7460810;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.937:326.675,113.385:0.0,0.0:0.0,6.82864e-07,1.0
-chr1	7461208	.	CACACACACACACACACACACACACA	.	.	.	END=7461233;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99988:13,13:4-13,4-13:29,18,0,13:12,4|13,25:5,1|6,2|7,1|8,1|9,2|10,3|11,1|12,1|13,1:406.177:326.675,113.385:2.43794,2.43794:8.67065e-38,0.000120026,0.99988
-chr1	7466892	.	TAAATAAATAAA	.	.	.	END=7466903;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999881:3,3:3-3,3-3:16,8,0,0:3,16:NULL:134.134:326.675,113.385:0.0,0.0:0.0,7.06065e-05,0.999933
-chr1	7466980	.	AAAGTTTAAAGTTTAAAGTTT	.	.	.	END=7467000;RU=aaagttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999723:3,3:3-3,3-3:15,4,0,0:3,15:NULL:96.7021:326.675,113.385:0.0,0.0:0.0,0.000150997,0.99985
-chr1	7468038	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=7468113;RU=tttc;PERIOD=4;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.020238:16,16:7-19,7-19:0,7,0,13:NULL:7,2|10,1|11,2|12,5|13,1|14,1|16,1:158.469:326.675,113.385:3.56232,3.56232:0.312801,0.5122,0.175013
-chr1	7468830	.	AAAACAAAACAAAAC	.	.	.	END=7468844;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999755:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.313:326.675,113.385:0.0,0.0:0.0,0.00016387,0.999841
-chr1	7469326	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=7469375;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984792:25,25:20-27,20-27:11,23,0,12:25,11:6,2|7,2|9,1|13,1|14,2|18,1|19,2|25,1:366.528:326.675,113.385:1.77125,1.77125:1.29155e-26,0.00944488,0.990575
-chr1	7469376	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7469415;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.920153:20,20:20-20,20-20:7,24,0,21:20,7:5,2|6,1|7,4|8,1|9,1|10,1|11,2|12,2|14,2|15,2|16,1|18,1|19,1:420.393:326.675,113.385:0.0,0.0:4.29867e-09,0.0449381,0.955134
-chr1	7473898	.	AAACAAACAAAC	.	.	.	END=7473909;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999257:3,3:3-3,3-3:14,11,0,0:3,14:NULL:154.952:326.675,113.385:0.0,0.0:9.73e-43,0.000477853,0.999523
-chr1	7475210	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=7475227;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:177.338:326.675,113.385:0.0,0.0:0.0,3.60068e-07,1.0
-chr1	7475765	.	TATTATTATTAT	.	.	.	END=7475776;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993907:4,4:4-4,4-4:11,6,0,0:4,11:NULL:98.0058:326.675,113.385:0.0,0.0:7.5814e-37,0.00390186,0.99611
-chr1	7482108	.	TTTTTTGTTTTTTGTTTTTTGTTTTTTG	.	.	.	END=7482135;RU=ttttttg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999114:4,4:4-4,4-4:13,7,0,5:4,13:2,1|3,4:149.54:326.675,113.385:0.0,0.0:3.87466e-38,0.000414173,0.99959
-chr1	7482227	.	ACCCACCCACCC	.	.	.	END=7482238;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.951091:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.78:326.675,113.385:0.19802,0.19802:4.98595e-22,0.0337134,0.966351
-chr1	7492065	.	GGAGGGAGGGAG	.	.	.	END=7492076;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:154.508:326.675,113.385:0.0,0.0:0.0,5.77157e-07,1.0
-chr1	7493936	.	TAAATAAATAAATAAA	.	.	.	END=7493951;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999022:4,4:4-4,4-4:13,6,0,4:4,13:3,4:131.793:326.675,113.385:0.0,0.0:1.34938e-38,0.000363209,0.999637
-chr1	7495072	.	AAAATAAAATAAAAT	.	.	.	END=7495086;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999969:3,3:3-3,3-3:18,17,0,0:3,18:NULL:232.209:326.675,113.385:0.0,0.0:0.0,3.56805e-05,0.999964
-chr1	7497345	.	CAAACAAACAAA	.	.	.	END=7497356;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.094:326.675,113.385:0.0,0.0:0.0,2.8124e-06,1.0
-chr1	7500168	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=7500193;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.419391:12,14:12-13,12-14:9,7,0,0:12,3|13,3|14,3:NULL:116.493:326.675,113.385:0.538126,0.588255:0.000815859,0.579807,0.419465
-chr1	7502120	.	ACACACACACACAC	.	.	.	END=7502133;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999841:7,7:6-7,6-7:28,19,0,3:6,3|7,25:4,1|5,2:329.444:326.675,113.385:0.253975,0.253975:0.0,0.000161628,0.999841
-chr1	7507479	.	TTTTAAATTTTAAATTTTAAA	.	.	.	END=7507499;RU=ttttaaa;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997651:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.947:326.675,113.385:0.0,0.0:1.18906e-35,0.00174143,0.998262
-chr1	7512509	.	TAAATAAATAAA	.	.	.	END=7512520;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995942:3,3:3-3,3-3:11,7,0,0:3,11:NULL:105.003:326.675,113.385:0.0,0.0:1.63034e-36,0.00216985,0.997837
-chr1	7518438	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7518481;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.769607:22,22:21-22,21-22:9,11,0,14:21,2|22,7:5,2|6,1|7,1|11,2|12,1|13,2|14,1|15,2|16,2:254.253:326.675,113.385:0.398507,0.398507:6.15149e-07,0.210266,0.789782
-chr1	7520010	.	TGTGTGTGTGTGTG	.	.	.	END=7520023;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:28,8,0,0:7,28:NULL:187.502:326.675,113.385:0.0,0.0:4.34125e-35,6.38469e-08,1.0
-chr1	7520572	.	AAACAAAACAAAACA	.	.	.	END=7520586;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,6,0,0:3,25:NULL:150.359:326.675,113.385:0.0,0.0:0.0,1.45848e-07,1.0
-chr1	7522440	.	ATACATACATAC	.	.	.	END=7522451;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999312:3,3:3-3,3-3:14,6,0,0:3,14:NULL:110.981:326.675,113.385:0.0,0.0:0.0,0.000350902,0.999651
-chr1	7522568	.	TATATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=7522619;RU=ta;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.020438:23,23:26-26,26-26:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
-chr1	7522982	.	TTCTTTCTTTCTTTCT	.	.	.	END=7522997;RU=ttct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:147.627:326.675,113.385:0.0,0.0:0.0,1.34801e-06,1.0
-chr1	7524309	.	TAAAATAAAATAAAATAAAATAAAA	.	.	.	END=7524333;RU=taaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959119:5,5:5-5,5-5:7,11,0,5:5,7:4,5:166.74:326.675,113.385:0.0,0.0:2.65051e-20,0.0202231,0.979819
-chr1	7524638	.	AACAAACAAACAAACAAACA	.	.	.	END=7524657;RU=aaca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:3-5,3-5:24,9,0,6:5,24:3,2|4,4:220.454:326.675,113.385:0.43384,0.43384:0.0,1.91326e-07,1.0
-chr1	7527088	.	TTTTATTTTATTTTA	.	.	.	END=7527102;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:198.701:326.675,113.385:0.0,0.0:0.0,6.87673e-06,0.999994
-chr1	7527397	.	AATAAATAAATA	.	.	.	END=7527408;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.585:326.675,113.385:0.0,0.0:0.0,5.10849e-06,0.999995
-chr1	7532994	.	TCTCTCTCTCTCTCTC	.	.	.	END=7533009;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:32,24,0,8:8,32:5,3|6,2|7,3:406.392:326.675,113.385:0.0,0.0:0.0,1.17275e-09,1.0
-chr1	7538575	.	TTAATTAATTAATTAA	.	.	.	END=7538590;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999905:4,4:4-4,4-4:17,8,0,0:4,17:NULL:137.243:326.675,113.385:0.0,0.0:0.0,6.42069e-05,0.99994
-chr1	7542839	.	TCTCCTCTCCTCTCC	.	.	.	END=7542853;RU=tctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:172.591:326.675,113.385:0.0,0.0:0.0,8.90944e-08,1.0
-chr1	7544211	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=7544230;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,11,0,2:4,19:3,2:191.689:326.675,113.385:0.0,0.0:0.0,7.93364e-06,0.999994
-chr1	7544358	.	ATATATATATATATAT	.	.	.	END=7544373;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997822:8,8:8-8,8-8:13,10,0,0:8,13:NULL:149.317:326.675,113.385:0.0,0.0:2.6257e-17,0.00140249,0.998603
-chr1	7546856	.	TTTGTTTGTTTG	.	.	.	END=7546867;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,13,0,0:3,32:NULL:240.066:326.675,113.385:0.0,0.0:0.0,1.40992e-09,1.0
-chr1	7549821	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7549896;RU=ag;PERIOD=2;REF=38.0;EXPTHRESH=38	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.240765:37,37:35-37,35-37:2,14,0,13:37,2:5,1|8,1|9,1|14,2|15,2|16,1|19,1|24,1|27,1|30,1|34,1:243.499:326.675,113.385:0.43384,0.43384:0.619148,0.35909,0.0218496
-chr1	7550748	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=7550765;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.669:326.675,113.385:0.0,0.0:0.0,2.4095e-07,1.0
-chr1	7554806	.	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=7554849;RU=tatt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995921:11,11:11-11,11-11:11,10,0,10:11,11:5,1|6,2|7,2|9,1|10,4:208.914:326.675,113.385:0.0,0.0:1.39714e-23,0.00136196,0.998641
-chr1	7559127	.	GTTAATGGTTAATGGTTAATGGTTAATG	.	.	.	END=7559154;RU=gttaatg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:4,4:4-4,4-4:16,14,0,8:4,16:3,8:247.545:326.675,113.385:0.0,0.0:0.0,5.09107e-05,0.999949
-chr1	7560900	.	TTTATTTATTTATTTATTTA	.	.	.	END=7560919;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:30,8,0,2:5,30:3,1|4,1:207.471:326.675,113.385:0.0,0.0:0.0,5.3766e-09,1.0
-chr1	7570199	.	TTGTTGTTGTTG	.	.	.	END=7570210;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,12,0,0:4,21:NULL:193.419:326.675,113.385:0.0,0.0:0.0,3.83183e-06,1.0
-chr1	7579482	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7579505;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995425:6,6:5-6,5-6:22,11,0,7:5,2|6,20:2,1|3,1|4,1|5,4:251.596:326.675,113.385:0.398507,0.398507:0.0,0.00459544,0.995416
-chr1	7584141	.	AACAACAACAAC	.	.	.	END=7584152;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:152.193:326.675,113.385:0.0,0.0:0.0,3.31203e-06,1.0
-chr1	7586036	.	TGGGTGGGTGGG	.	.	.	END=7586047;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:197.905:326.675,113.385:0.0,0.0:0.0,4.50361e-05,0.999956
-chr1	7590013	.	ATGTATGTATGTATGTATGTATGTATGT	.	.	.	END=7590040;RU=atgt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:27,15,0,11:7,27:2,1|3,2|4,2|5,3|6,3:334.025:326.675,113.385:0.0,0.0:6.34877e-36,7.12813e-08,1.0
-chr1	7591071	.	GAGGAGGAGGAGGAGGAG	.	.	.	END=7591088;RU=gag;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,24,0,2:6,22:4,1|5,1:315.295:326.675,113.385:0.0,0.0:0.0,1.8212e-06,1.0
-chr1	7592319	.	CAAACAAACAAA	.	.	.	END=7592330;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997808:3,3:3-3,3-3:12,2,0,0:3,12:NULL:65.2842:326.675,113.385:0.0,0.0:6.32806e-39,0.000946074,0.999058
-chr1	7593902	.	AAACAAACAAACAAAC	.	.	.	END=7593917;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,18,0,4:4,22:2,1|3,3:291.754:326.675,113.385:0.0,0.0:0.0,2.25469e-06,1.0
-chr1	7604547	.	TTAATTAATTAA	.	.	.	END=7604558;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:3,3:3-3,3-3:17,16,0,0:3,17:NULL:206.927:326.675,113.385:0.0,0.0:0.0,4.86683e-05,0.999955
-chr1	7606004	.	CTGCTGCTGCTG	.	.	.	END=7606015;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:33,17,0,0:4,33:NULL:284.495:326.675,113.385:0.0,0.0:0.0,1.60651e-09,1.0
-chr1	7614755	.	TCCTCCTCCTCC	.	.	.	END=7614766;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:39,13,0,3:4,39:3,3:289.997:326.675,113.385:0.0,0.0:0.0,7.01508e-12,1.0
-chr1	7618269	.	AATAAATAAATA	.	.	.	END=7618280;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,2,0,0:3,25:NULL:115.743:326.675,113.385:0.0,0.0:0.0,1.26847e-07,1.0
-chr1	7621644	.	CTTTCTTTCTTT	.	.	.	END=7621655;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.959:326.675,113.385:0.0,0.0:0.0,1.43963e-07,1.0
-chr1	7624737	.	CAACAACAACAACAACAACAACAACAACAA	.	.	.	END=7624766;RU=caa;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:10,10:10-10,10-10:24,9,0,6:10,24:6,2|7,2|9,2:226.838:326.675,113.385:0.0,0.0:0.0,2.91704e-07,1.0
-chr1	7626618	.	TTATTTATTTATTTAT	.	.	.	END=7626633;RU=ttat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:19,3,0,2:4,19:2,1|3,1:115.882:326.675,113.385:0.0,0.0:0.0,6.68964e-06,0.999994
-chr1	7630404	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7630451;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.983016:24,25:23-24,23-25:21,13,0,23:23,8|24,11|25,2:4,1|6,1|8,1|10,2|11,1|12,1|14,1|15,1|16,1|17,3|18,2|20,1|21,2|22,2|23,1|24,1|25,1:429.446:326.675,113.385:0.475866,0.848371:1.52509e-19,0.0136464,0.986385
-chr1	7632861	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	.	END=7632920;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930921:15,15:14-15,14-15:8,31,0,22:15,8:3,1|4,4|5,2|6,1|7,1|8,1|9,4|10,3|11,4|13,1:479.498:326.675,113.385:0.499387,0.499387:6.14073e-22,0.0616203,0.938469
-chr1	7633359	.	ACACACACACACACACACACACACACACACACACACAC	.	.	.	END=7633396;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.79191:19,19:19-19,19-19:6,7,0,8:19,6:8,1|10,1|12,2|13,1|15,1|17,1|18,1:157.17:326.675,113.385:0.0,0.0:1.67294e-08,0.0692101,0.930883
-chr1	7633397	.	ATTAATTAATTA	.	.	.	END=7633408;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99704:3,3:3-3,3-3:12,5,0,0:3,12:NULL:96.7465:326.675,113.385:0.0,0.0:1.72428e-21,0.00151512,0.998489
-chr1	7637624	.	CACACACACACACA	.	.	.	END=7637637;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999836:7,7:7-9,7-9:27,10,0,0:7,24|8,3:NULL:204.461:326.675,113.385:0.405095,0.405095:1.08056e-35,1.06684e-07,1.0
-chr1	7637849	.	TAATAATAATAA	.	.	.	END=7637860;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:226.901:326.675,113.385:0.0,0.0:0.0,1.6664e-06,1.0
-chr1	7642243	.	AACAACAACAACAACAACAACAACAAC	.	.	.	END=7642269;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994938:9,9:9-10,9-10:11,13,0,7:9,11:4,2|6,1|7,1|8,3:214.352:326.675,113.385:0.46122,0.46122:3.66479e-24,0.00171286,0.998292
-chr1	7644073	.	GGGTGGGTGGGT	.	.	.	END=7644084;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996096:3,3:3-3,3-3:12,36,0,0:3,12:NULL:366.483:326.675,113.385:0.0,0.0:1.17169e-35,0.00335808,0.996649
-chr1	7651115	.	TTTCTTTCTTTC	.	.	.	END=7651126;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99948:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.136:326.675,113.385:0.0,0.0:0.0,0.000349136,0.999652
-chr1	7652360	.	GAGAGAGAGAGAGAGAGA	GAGAGAGA	.	.	END=7652377;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.929022:4,9:4-9,9-9:29,15,0,0:4,5|7,5|9,19:NULL:288.077:326.675,113.385:1.79969,0.0:1.63191e-37,0.99934,0.000661574
-chr1	7658674	.	TTTATTTATTTA	.	.	.	END=7658685;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,12,0,6:3,30:2,6:271.917:326.675,113.385:0.0,0.0:0.0,2.61691e-09,1.0
-chr1	7660964	.	TGCCTGCCTGCCTGCC	.	.	.	END=7660979;RU=tgcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999887:4,4:3-4,3-4:16,7,0,3:4,16:2,1|3,2:152.085:326.675,113.385:0.419363,0.419363:0.0,5.94852e-05,0.999941
-chr1	7660996	.	TCTTTCTTTCTTTCTT	.	.	.	END=7661011;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999809:4,4:4-4,4-4:16,6,0,0:4,16:NULL:120.568:326.675,113.385:0.0,0.0:0.0,0.000139604,0.999864
-chr1	7661246	.	TGTGTGTGTGTGTGTGTGTG	.	.	.	END=7661265;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.970158:10,10:10-11,10-11:20,12,0,5:10,17|11,3:5,1|6,1|7,1|8,2:243.239:326.675,113.385:0.374147,0.374147:2.30016e-25,9.69941e-06,0.999993
-chr1	7661271	.	TTGTTGTTGTTG	.	.	.	END=7661282;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,11,0,0:4,26:NULL:207.408:326.675,113.385:0.0,0.0:0.0,1.57076e-07,1.0
-chr1	7667977	.	GGGGTGGGGTGGGGT	.	.	.	END=7667991;RU=ggggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,25,0,3:3,38:2,3:409.533:326.675,113.385:0.0,0.0:0.0,2.39564e-11,1.0
-chr1	7668272	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7668301;RU=ga;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999955:15,15:15-15,15-15:33,18,0,12:14,5|15,28:5,1|7,1|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,1:408.274:326.675,113.385:0.0990099,0.0990099:3.48e-39,4.78434e-05,0.999955
-chr1	7668463	.	GGAGAGGAGAGGAGA	.	.	.	END=7668477;RU=ggaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.884408:3,3:3-3,3-3:6,16,0,0:3,6:NULL:168.509:326.675,113.385:0.0,0.0:8.96207e-17,0.0784737,0.921624
-chr1	7678104	.	TGTTTTGTTTTGTTT	.	.	.	END=7678118;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999438:3,3:3-3,3-3:14,11,0,0:3,14:NULL:162.108:326.675,113.385:0.0,0.0:2.4e-44,0.00034485,0.999659
-chr1	7684673	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7684693;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998834:7,7:7-7,7-7:13,12,0,4:7,13:4,1|5,2|6,1:193.784:326.675,113.385:0.0,0.0:1.27248e-39,0.000558105,0.999446
-chr1	7686794	.	TTATTTATTTAT	.	.	.	END=7686805;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:156.467:326.675,113.385:0.0,0.0:0.0,2.85844e-07,1.0
-chr1	7688060	.	TATATTATATTATAT	.	.	.	END=7688074;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99878:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.606:326.675,113.385:0.0,0.0:1.23e-43,0.000718745,0.999286
-chr1	7691107	.	CATCATCATCAT	.	.	.	END=7691118;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:35,17,0,4:4,35:3,4:322.898:326.675,113.385:0.0,0.0:0.0,7.26367e-11,1.0
-chr1	7694774	.	GTTGTTGTTGTTGTTGTT	.	.	.	END=7694791;RU=gtt;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9979:6,6:6-6,6-6:12,8,0,2:6,12:4,1|5,1:136.005:326.675,113.385:0.0,0.0:5.14711e-31,0.00100407,0.998998
-chr1	7694925	.	AAAAACAAAAAACAAAAAACA	.	.	.	END=7694945;RU=aaaaaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:116.335:326.675,113.385:0.0,0.0:0.0,3.64749e-06,1.0
-chr1	7695814	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7695835;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.293335:11,15:11-11,11-15:16,6,0,5:11,16:7,1|10,3|15,1:170.999:326.675,113.385:0.0,1.9624:1.21793e-27,7.70312e-08,1.0
-chr1	7695943	.	ATTTATTTATTTATTT	.	.	.	END=7695958;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999907:4,4:4-4,4-4:17,11,0,0:4,17:NULL:160.39:326.675,113.385:0.0,0.0:1.4e-44,5.94761e-05,0.999941
-chr1	7696936	.	AAGGAAGGAAGG	.	.	.	END=7696947;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:311.19:326.675,113.385:0.0,0.0:0.0,4.7513e-08,1.0
-chr1	7708555	.	TATATATATATATATATATATATATATATATATATATATA	.	.	.	END=7708594;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.210509:20,20:19-20,19-20:2,2,0,0:20,2:NULL:27.8346:326.675,113.385:0.284901,0.284901:0.0129125,0.424261,0.562949
-chr1	7714389	.	TTTATTTATTTA	.	.	.	END=7714400;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998997:3,3:3-3,3-3:13,6,0,2:3,13:2,2:118.63:326.675,113.385:0.0,0.0:5.2e-44,0.000355482,0.999645
-chr1	7716510	.	TTCTTCTTCTTC	.	.	.	END=7716521;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:219.121:326.675,113.385:0.0,0.0:0.0,4.9399e-07,1.0
-chr1	7722901	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7722920;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993087:4,4:4-4,4-4:11,4,0,0:4,11:NULL:82.8366:326.675,113.385:0.0,0.0:1.07704e-37,0.00430158,0.995711
-chr1	7726872	.	GCATGCATGCAT	.	.	.	END=7726883;RU=gcat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,8,0,5:3,25:2,5:204.689:326.675,113.385:0.0,0.0:0.0,6.51567e-08,1.0
-chr1	7730158	.	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	.	.	END=7730267;RU=ttccc;PERIOD=5;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0548084:21,21:8-23,8-23:0,12,0,22:NULL:3,1|4,2|5,1|8,1|9,1|10,1|11,2|13,1|14,2|16,3|18,1|19,2|20,4:268.821:326.675,113.385:5.02335,5.02335:0.261242,0.509873,0.228898
-chr1	7730913	.	TTATTTATTTAT	.	.	.	END=7730924;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999976:3,3:3-3,3-3:17,12,0,2:3,17:2,2:191.298:326.675,113.385:0.0,0.0:0.0,1.77926e-05,0.999986
-chr1	7730966	.	TTAATTAATTAA	.	.	.	END=7730977;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:181.216:326.675,113.385:0.0,0.0:0.0,4.03032e-06,0.999995
-chr1	7731592	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7731635;RU=tc;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.564427:22,24:21-22,21-24:10,17,0,12:21,4|22,6:9,1|11,3|13,1|18,1|19,1|21,3|22,1|24,1:316.193:326.675,113.385:0.298675,1.12871:1.40782e-18,0.000296911,0.999705
-chr1	7731916	.	TGTATGTATGTA	.	.	.	END=7731927;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999697:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.413:326.675,113.385:0.0,0.0:0.0,0.00016162,0.999841
-chr1	7731957	.	TGTATGTATGTA	.	.	.	END=7731968;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999966:3,3:3-3,3-3:18,6,0,2:3,18:2,2:143.569:326.675,113.385:0.0,0.0:0.0,1.6661e-05,0.999986
-chr1	7732202	.	GGTTGGGTTGGGTTG	.	.	.	END=7732216;RU=ggttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:3,3:3-3,3-3:17,9,0,0:3,17:NULL:154.298:326.675,113.385:0.0,0.0:0.0,5.22394e-05,0.999949
-chr1	7736177	.	CACACACACACACA	.	.	.	END=7736190;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977661:7,7:6-7,6-7:21,6,0,4:6,2|7,19:5,1|6,3:179.53:326.675,113.385:0.412766,0.412766:7.098e-42,0.0223881,0.977653
-chr1	7741556	.	CTCTCTCTCTCT	.	.	.	END=7741567;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,16,0,0:6,23:NULL:239.065:326.675,113.385:0.0,0.0:0.0,9.61291e-07,1.0
-chr1	7742062	.	GTGGTGGTGGTGGTGGTGGTGGTGGTG	.	.	.	END=7742088;RU=gtg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.919382:9,9:5-9,5-9:26,32,0,4:5,2|8,2|9,22:6,1|8,3:453.025:326.675,113.385:1.77932,1.77932:0.0,0.0807176,0.919377
-chr1	7750668	.	AGGAGGAGGAGGAGGAGG	.	.	.	END=7750685;RU=agg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:31,16,0,5:6,31:3,2|5,3:309.142:326.675,113.385:0.0,0.0:0.0,1.43422e-09,1.0
-chr1	7751603	.	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=7751648;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.902676:23,23:23-24,23-24:8,19,0,25:23,8:5,1|7,2|8,2|9,1|10,2|11,2|12,2|13,1|14,1|16,1|17,1|18,2|19,1|20,2|21,3|22,1:408.968:326.675,113.385:0.398507,0.398507:7.15271e-09,0.0285055,0.971546
-chr1	7753197	.	CATACATACATACATACATACATACATACATACATA	.	.	.	END=7753232;RU=cata;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:19,13,0,15:9,19:3,1|4,3|5,5|6,2|7,1|8,3:306.119:326.675,113.385:0.0,0.0:3.61896e-38,5.86017e-06,0.999995
-chr1	7754174	.	TTGTCCCTTGTCCCTTGTCCC	.	.	.	END=7754194;RU=ttgtccc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,2:3,21:2,2:165.233:326.675,113.385:0.0,0.0:0.0,1.73527e-06,1.0
-chr1	7756374	.	GTGGGTGGGTGG	.	.	.	END=7756385;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,35,0,2:3,21:2,2:419.101:326.675,113.385:0.0,0.0:0.0,2.44914e-06,1.0
-chr1	7757086	.	TAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTA	.	.	.	END=7757130;RU=tagta;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:9,9:6-9,6-9:19,12,0,6:9,19:2,2|3,1|6,1|7,1|8,1:237.37:326.675,113.385:0.810189,0.810189:3e-45,1.63925e-05,0.999986
-chr1	7769821	.	TAAATAAATAAA	.	.	.	END=7769832;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:151.86:326.675,113.385:0.0,0.0:0.0,2.38585e-06,1.0
-chr1	7771289	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7771316;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997637:7,7:7-7,7-7:12,7,0,2:7,12:2,1|6,1:126.413:326.675,113.385:0.0,0.0:1.45808e-39,0.0012583,0.998747
-chr1	7771869	.	TCTTTCTTTCTTTCTTTCTT	.	.	.	END=7771888;RU=tctt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999415:5,5:5-5,5-5:14,6,0,3:5,14:2,1|3,1|4,1:137.823:326.675,113.385:0.0,0.0:4.70182e-40,0.000351915,0.999651
-chr1	7774572	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	.	END=7774631;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.909649:15,15:14-15,14-15:6,12,0,9:15,6:4,2|6,1|8,1|12,1|13,1|14,3:205.97:326.675,113.385:0.469019,0.469019:1.82433e-14,0.0521929,0.947889
-chr1	7774898	.	GAGAAGAGAAGAGAAGAGAAGAGAAGAGAA	.	.	.	END=7774927;RU=gagaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.404266:6,6:3-6,3-6:3,18,0,3:6,3:3,1|5,2:195.218:326.675,113.385:1.06683,1.06683:4.95948e-08,0.451993,0.54812
-chr1	7778042	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7778123;RU=ga;PERIOD=2;REF=41.0;EXPTHRESH=41	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.0276154:20,52:14-52,31-53:0,16,0,16:NULL:4,1|7,1|10,1|12,3|15,1|18,2|20,1|28,2|39,1|45,2|52,1:284.165:326.675,113.385:12.7726,4.55678:9.26909e-22,0.769413,0.230618
-chr1	7779108	.	ACACACACACACACACACACACACACAC	.	.	.	END=7779135;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993219:14,14:14-15,14-15:11,5,0,5:14,11:6,2|8,1|11,1|13,1:133.13:326.675,113.385:0.35561,0.35561:3.71014e-16,0.00236198,0.997647
-chr1	7781851	.	AACAAAACAAAACAA	.	.	.	END=7781865;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,13,0,0:3,25:NULL:214.334:326.675,113.385:0.0,0.0:0.0,2.10585e-07,1.0
-chr1	7788005	.	ACCCACCCACCC	.	.	.	END=7788016;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999849:3,3:3-3,3-3:16,11,0,0:3,16:NULL:167.991:326.675,113.385:0.0,0.0:0.0,0.000115193,0.999887
-chr1	7795035	.	ACCCACCCACCC	.	.	.	END=7795046;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998387:3,3:3-3,3-3:13,26,0,0:3,13:NULL:287.107:326.675,113.385:0.0,0.0:2.00258e-38,0.00140911,0.998595
-chr1	7798081	.	TATTTTATTTTATTT	.	.	.	END=7798095;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999956:3,3:3-3,3-3:17,10,0,0:3,17:NULL:157.95:326.675,113.385:0.0,0.0:0.0,3.8157e-05,0.999964
-chr1	7799463	.	ATGATGATGATG	.	.	.	END=7799474;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,8,0,0:4,30:NULL:188.498:326.675,113.385:0.0,0.0:0.0,6.34163e-09,1.0
-chr1	7801805	.	GTGGGTGGGTGG	.	.	.	END=7801816;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999994:3,3:3-3,3-3:19,16,0,2:3,19:2,2:233.35:326.675,113.385:0.0,0.0:0.0,1.24675e-05,0.999987
-chr1	7803754	.	ACCCACCCACCC	.	.	.	END=7803765;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.96189:3,3:3-3,3-3:8,26,0,0:3,8:NULL:262.362:326.675,113.385:0.0,0.0:5.20764e-25,0.0283073,0.971747
-chr1	7815175	.	TTGTTGTTGTTG	.	.	.	END=7815186;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99998:4,4:4-5,4-5:18,6,0,2:4,18:3,2:140.519:326.675,113.385:0.284901,0.284901:2.1276e-41,1.56478e-05,0.999986
-chr1	7815188	.	TAGTAGTAGTAGTAGTAGTAG	.	.	.	END=7815208;RU=tag;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999849:7,7:7-7,7-7:16,6,0,3:7,16:4,1|6,2:141.732:326.675,113.385:0.0,0.0:2.43164e-35,5.96846e-05,0.999941
-chr1	7817458	.	TTAATTAATTAA	.	.	.	END=7817469;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929308:3,3:3-3,3-3:7,7,0,0:3,7:NULL:89.6001:326.675,113.385:0.0,0.0:1.61186e-23,0.0389226,0.961144
-chr1	7819272	.	ACACACACACACACACACACACAC	.	.	.	END=7819295;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987278:12,12:11-12,11-12:14,11,0,4:11,2|12,12:8,2|9,1|10,1:196.047:326.675,113.385:0.236383,0.236383:1.05692e-17,0.0116967,0.98833
-chr1	7819739	.	ACCTGGGACGAGAAAACCTGGGACGAGAAAACCTGGGACGAGAAA	.	.	.	END=7819783;RU=acctgggacgagaaa;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993527:3,3:3-3,3-3:11,5,0,0:3,11:NULL:95.4833:326.675,113.385:0.0,0.0:5.11705e-14,0.0047793,0.995235
-chr1	7820296	.	AAAAGAAAAGAAAAG	.	.	.	END=7820310;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.7:326.675,113.385:0.0,0.0:0.0,1.19035e-05,0.999987
-chr1	7821542	.	TTTGTTTGTTTG	.	.	.	END=7821553;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,12,0,0:3,21:NULL:185.675:326.675,113.385:0.0,0.0:0.0,4.07183e-06,0.999995
-chr1	7823455	.	TTTATTTATTTA	.	.	.	END=7823466;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999854:3,3:3-3,3-3:16,7,0,0:3,16:NULL:122.28:326.675,113.385:0.0,0.0:0.0,7.10557e-05,0.999932
-chr1	7838440	.	CTGCTGCTGCTG	.	.	.	END=7838451;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:224.091:326.675,113.385:0.0,0.0:0.0,8.09682e-06,0.999994
-chr1	7840652	.	ACCCACCCACCC	.	.	.	END=7840663;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990279:3,3:3-3,3-3:10,13,0,0:3,10:NULL:152.789:326.675,113.385:0.0,0.0:1.10363e-26,0.00576428,0.994249
-chr1	7849736	.	GGGTGGGTGGGT	.	.	.	END=7849747;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993975:3,3:3-3,3-3:10,15,0,2:3,10:2,2:188.748:326.675,113.385:0.0,0.0:1.60427e-28,0.00273042,0.997276
-chr1	7851717	.	ATTTTTTTATTTTTTTATTTTTTT	.	.	.	END=7851740;RU=attttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.943631:3,3:3-3,3-3:7,6,0,2:3,7:2,2:99.6613:326.675,113.385:0.0,0.0:2.55924e-22,0.0283061,0.971747
-chr1	7857369	.	TTTAATTTAATTTAATTTAATTTAA	.	.	.	END=7857393;RU=tttaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:5,5:5-5,5-5:19,7,0,0:5,19:NULL:141.068:326.675,113.385:0.0,0.0:0.0,1.77228e-05,0.999986
-chr1	7861967	.	TTTGTTTTGTTTTGT	.	.	.	END=7861981;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,5,0,4:3,26:2,4:173.888:326.675,113.385:0.0,0.0:0.0,3.36513e-08,1.0
-chr1	7863803	.	TAAGATTAAGATTAAGAT	.	.	.	END=7863820;RU=taagat;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.778:326.675,113.385:0.0,0.0:0.0,8.92912e-07,1.0
-chr1	7867431	.	AAACAAACAAACAAAC	.	.	.	END=7867446;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,16,0,3:4,25:2,2|3,1:271.543:326.675,113.385:0.0,0.0:0.0,1.07199e-07,1.0
-chr1	7871205	.	ATTTATTTATTTATTTATTT	.	.	.	END=7871224;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999962:5,5:5-5,5-5:17,13,0,7:5,17:3,4|4,3:240.395:326.675,113.385:0.0,0.0:0.0,3.07993e-05,0.999971
-chr1	7879267	.	AAGAAAGAAAGA	.	.	.	END=7879278;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,7,0,3:3,26:2,3:185.156:326.675,113.385:0.0,0.0:0.0,3.62187e-08,1.0
-chr1	7881454	.	GACAGACAGACA	.	.	.	END=7881465;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,18,0,4:3,29:2,4:308.153:326.675,113.385:0.0,0.0:0.0,5.51923e-09,1.0
-chr1	7883786	.	ATTTATTTATTTATTTATTTATTT	.	.	.	END=7883809;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999929:6,6:6-6,6-6:17,10,0,4:6,17:3,1|4,1|5,1|6,1:191.156:326.675,113.385:0.0,0.0:0.0,2.64831e-05,0.999978
-chr1	7887170	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7887201;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988754:8,8:6-8,6-8:26,13,0,4:6,2|8,24:4,1|6,2|7,1:278.17:326.675,113.385:0.904844,0.904844:0.0,0.0112725,0.988754
-chr1	7888946	.	GACAGACAGACA	.	.	.	END=7888957;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:210.054:326.675,113.385:0.0,0.0:0.0,1.55212e-08,1.0
-chr1	7891093	.	ATATATATATATATATATATATATATATATATATATAT	.	.	.	END=7891130;RU=at;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.647398:19,19:18-22,18-22:6,4,0,0:19,6:NULL:62.7653:326.675,113.385:1.28538,1.28538:2.63552e-05,0.140772,0.859295
-chr1	7891383	.	TGTTTTGTTTTGTTT	.	.	.	END=7891397;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999915:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.421:326.675,113.385:0.0,0.0:0.0,5.49623e-05,0.999948
-chr1	7892968	.	AATAATAATAAT	.	.	.	END=7892979;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:180.598:326.675,113.385:0.0,0.0:0.0,7.9396e-07,1.0
-chr1	7895098	.	TTTTGTTTTGTTTTG	.	.	.	END=7895112;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:242.509:326.675,113.385:0.0,0.0:0.0,1.08537e-07,1.0
-chr1	7898220	.	ATAGATAGATAG	.	.	.	END=7898231;RU=atag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:272.183:326.675,113.385:0.0,0.0:0.0,1.8962e-06,1.0
-chr1	7902277	.	CTCTCTTGCTCTCTTGCTCTCTTGCTCTCTTG	.	.	.	END=7902308;RU=ctctcttg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999988:4,4:4-4,4-4:19,18,0,3:4,19:3,3:267.977:326.675,113.385:0.0,0.0:0.0,2.09661e-05,0.999979
-chr1	7902333	.	CTCTCCTCTCCTCTC	.	.	.	END=7902347;RU=ctctc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,13,0,2:3,22:2,2:226.959:326.675,113.385:0.0,0.0:0.0,1.32696e-06,1.0
-chr1	7902723	.	CACCCCACCCCACCCCACCC	.	.	.	END=7902742;RU=caccc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999912:4,4:4-4,4-4:16,14,0,3:4,16:3,3:212.011:326.675,113.385:0.0,0.0:0.0,5.59225e-05,0.999947
-chr1	7904296	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7904335;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.704436:20,21:19-20,18-21:9,7,0,16:19,2|20,5|21,2:5,3|6,2|12,2|13,1|15,1|16,2|17,2|18,1|19,2:238.51:326.675,113.385:0.469854,0.98424:1.38315e-07,0.101529,0.898575
-chr1	7906023	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7906042;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,6,0,7:5,24:2,1|3,4|4,2:198.611:326.675,113.385:0.0,0.0:0.0,1.73549e-07,1.0
-chr1	7909399	.	TCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7909410;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.290253:3,14:3-3,3-15:5,9,0,2:3,5:13,1|14,1:119.213:326.675,113.385:0.0,4.03871:2.8659e-27,6.00102e-14,1.0
-chr1	7915045	.	GTGTGTGTGTGT	.	.	.	END=7915056;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.965444:6,6:6-8,6-8:9,18,0,0:6,9:NULL:198.063:326.675,113.385:0.856192,0.856192:9.95762e-17,0.0222382,0.977805
-chr1	7926986	.	CAAAACAAAACAAAACAAAACAAAACAAAA	.	.	.	END=7927015;RU=caaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:27,24,0,5:6,27:2,1|3,2|4,1|5,1:368.58:326.675,113.385:0.0,0.0:0.0,5.05438e-08,1.0
-chr1	7937066	.	ACACACACACACAC	.	.	.	END=7937079;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999137:7,7:7-8,7-8:14,5,0,2:7,14:5,2:116.11:326.675,113.385:0.253975,0.253975:5.97146e-25,0.000346904,0.999658
-chr1	7937514	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7937567;RU=gt;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.848815:27,27:25-27,25-27:7,9,0,12:27,7:4,1|11,1|12,1|13,1|16,2|17,1|19,1|20,1|21,1|23,2:208.109:326.675,113.385:0.669764,0.669764:4.12169e-09,0.0626275,0.937463
-chr1	7939725	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=7939776;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.598119:26,26:23-26,23-26:4,21,0,20:26,4:5,1|6,3|7,1|8,1|9,3|11,1|15,1|16,1|18,1|19,1|20,2|21,1|25,2|26,1:369.806:326.675,113.385:1.00893,1.00893:6.09719e-14,0.206923,0.793123
-chr1	7939777	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7939814;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.342097:19,26:19-19,18-27:15,13,0,3:18,2|19,13:18,1|21,1|26,1:228.743:326.675,113.385:0.0,3.06477:5.61739e-33,5.98841e-12,1.0
-chr1	7967867	.	AAACAAACAAACAAACAAAC	.	.	.	END=7967886;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997946:5,5:5-5,5-5:12,11,0,5:5,12:2,1|3,1|4,3:180.598:326.675,113.385:0.0,0.0:1.398e-42,0.000923213,0.999081
-chr1	7968753	.	AAGCAAGCAAGC	.	.	.	END=7968764;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.96209:3,3:3-3,3-3:8,7,0,0:3,8:NULL:94.2688:326.675,113.385:0.0,0.0:3.25334e-27,0.0200543,0.979987
-chr1	7969719	.	AAATAAATAAATAAATAAAT	.	.	.	END=7969738;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977978:5,5:5-5,5-5:9,4,0,0:5,9:NULL:72.6275:326.675,113.385:0.0,0.0:3.47392e-30,0.0125675,0.987461
-chr1	7986821	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=7986852;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999515:8,8:8-8,8-8:14,14,0,15:8,14:3,2|4,1|5,5|6,4|7,3:291.605:326.675,113.385:0.0,0.0:2.75757e-38,0.000194398,0.99981
-chr1	8003962	.	TTGTTTGTTTGT	.	.	.	END=8003973;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.883694:3,3:3-3,3-3:6,10,0,0:3,6:NULL:118.129:326.675,113.385:0.0,0.0:9.06063e-21,0.0639908,0.936099
-chr1	8004898	.	AAGGAAGGAAGG	.	.	.	END=8004909;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:213.394:326.675,113.385:0.0,0.0:0.0,8.8998e-06,0.999994
-chr1	8005269	.	TTTATTTATTTA	.	.	.	END=8005280;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:20,16,0,0:3,20:NULL:233.918:326.675,113.385:0.0,0.0:0.0,1.32684e-05,0.999987
-chr1	8005894	.	GTGTGTGTGTGTGT	.	.	.	END=8005907;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99969:7,7:7-8,7-8:15,12,0,4:7,15:4,1|6,3:200.321:326.675,113.385:0.270063,0.270063:6.405e-28,0.000103737,0.999896
-chr1	8015093	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	END=8015152;RU=ggag;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0494967:12,12:8-12,8-12:0,3,0,6:NULL:3,1|6,1|8,1|11,1|12,2:70.3561:326.675,113.385:1.30046,1.30046:0.676946,0.294354,0.028742
-chr1	8015152	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=8015183;RU=ggaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999814:8,8:8-10,8-10:16,2,0,3:8,16:3,1|7,2:105.387:326.675,113.385:0.797014,0.797014:1.31413e-38,5.16073e-05,0.999949
-chr1	8015590	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8015635;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.654856:23,24:22-23,21-24:11,7,0,5:22,3|23,6|24,2:4,1|5,2|6,1|12,1:164.248:326.675,113.385:0.429525,0.920845:3.63768e-08,0.076716,0.923377
-chr1	8018726	.	CTGCTGCTGCTG	.	.	.	END=8018737;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,21,0,0:4,22:NULL:268.061:326.675,113.385:0.0,0.0:0.0,2.23241e-06,1.0
-chr1	8019993	.	ACACACACACACACACACACACACACAC	.	.	.	END=8020020;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999506:14,14:14-15,14-15:26,15,0,6:13,3|14,21|15,2:4,1|5,1|7,1|9,1|12,2:312.639:326.675,113.385:0.195027,0.195027:3.34035e-27,0.000366867,0.999636
-chr1	8023350	.	TGATGATGATGA	.	.	.	END=8023361;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,13,0,0:4,19:NULL:194.258:326.675,113.385:0.0,0.0:0.0,1.44639e-05,0.999986
-chr1	8028124	.	ACACACACACACACAC	.	.	.	END=8028139;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:28,12,0,7:8,28:5,2|6,1|7,4:281.72:326.675,113.385:0.0,0.0:0.0,1.34757e-08,1.0
-chr1	8035149	.	GTGTGTGTGTGTGT	.	.	.	END=8035162;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:30,17,0,2:7,30:6,2:300.087:326.675,113.385:0.0,0.0:0.0,8.81438e-09,1.0
-chr1	8039355	.	GTGGGTGGGTGG	.	.	.	END=8039366;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:51,11,0,4:3,51:2,4:327.464:326.675,113.385:0.0,0.0:0.0,1.1277e-15,1.0
-chr1	8039460	.	ATACATACATACATACATACATAC	.	.	.	END=8039483;RU=atac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:28,15,0,8:6,28:2,2|3,2|4,2|5,2:306.503:326.675,113.385:0.0,0.0:0.0,1.9037e-08,1.0
-chr1	8047704	.	TGGTTGGTTGGT	.	.	.	END=8047715;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:32,12,0,0:3,32:NULL:233.934:326.675,113.385:0.0,0.0:0.0,1.47459e-09,1.0
-chr1	8053368	.	AAATAAATAAAT	.	.	.	END=8053379;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995495:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.957:326.675,113.385:0.0,0.0:2.08069e-37,0.0027254,0.997283
-chr1	8057815	.	TTTATTTATTTA	.	.	.	END=8057826;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:210.317:326.675,113.385:0.0,0.0:0.0,5.71642e-06,0.999995
-chr1	8058525	.	CTACTACTACTA	.	.	.	END=8058536;RU=cta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:202.493:326.675,113.385:0.0,0.0:0.0,6.14543e-06,0.999995
-chr1	8058938	.	TTGGTTGGTTGG	.	.	.	END=8058949;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:3,3:3-3,3-3:19,26,0,0:3,19:NULL:314.665:326.675,113.385:0.0,0.0:0.0,2.32134e-05,0.999979
-chr1	8061760	.	TTTATTTATTTA	.	.	.	END=8061771;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:209.233:326.675,113.385:0.0,0.0:0.0,1.0808e-07,1.0
-chr1	8063311	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8063358;RU=ct;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.942422:24,25:23-24,23-26:13,11,0,6:23,3|24,7|25,3:5,2|10,1|18,2|24,1:231.017:326.675,113.385:0.253975,0.85905:5.17546e-17,0.0127168,0.987312
-chr1	8063359	.	CACACACACACACACACACACACACACA	.	.	.	END=8063386;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998811:14,14:13-14,13-14:13,12,0,7:14,13:5,1|7,1|10,2|12,2|13,1:226.441:326.675,113.385:0.253975,0.253975:1.41554e-22,0.000607714,0.999394
-chr1	8066722	.	CATGCATGCATG	.	.	.	END=8066733;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999638:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.182:326.675,113.385:0.0,0.0:0.0,0.000209397,0.999795
-chr1	8068975	.	ATTCATTCATTC	.	.	.	END=8068986;RU=attc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:146.035:326.675,113.385:0.0,0.0:0.0,2.6369e-07,1.0
-chr1	8075123	.	CTCCCTCCCTCC	.	.	.	END=8075134;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:248.856:326.675,113.385:0.0,0.0:0.0,1.1653e-07,1.0
-chr1	8083970	.	GTGTGTGTGTGT	.	.	.	END=8083981;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:33,20,0,0:6,33:NULL:306.839:326.675,113.385:0.0,0.0:0.0,1.10416e-09,1.0
-chr1	8091175	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8091222;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.641589:24,24:23-24,23-24:13,12,0,7:23,3|24,10:11,1|16,1|17,1|19,3|23,1:225.676:326.675,113.385:0.491073,0.491073:6.05201e-11,0.357067,0.642976
-chr1	8093608	.	AGAAAGAAAGAA	.	.	.	END=8093619;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:220.726:326.675,113.385:0.0,0.0:0.0,6.07462e-08,1.0
-chr1	8095889	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8095942;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.276807:27,36:27-27,9-36:14,20,0,33:26,3|27,9|28,2:5,2|6,1|8,1|9,1|11,3|12,2|13,1|14,1|15,2|16,1|17,1|18,1|19,1|20,1|21,4|22,1|24,1|25,2|26,2|27,1|29,1|30,1|34,1:534.626:326.675,113.385:0.0990099,7.57372:7.14644e-35,2.33556e-10,1.0
-chr1	8098070	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=8098089;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999931:4,4:4-4,4-4:17,12,0,2:4,17:3,2:191.621:326.675,113.385:0.0,0.0:0.0,3.87537e-05,0.999963
-chr1	8099157	.	ATATATATATATATATATATATATATATAT	.	.	.	END=8099186;RU=at;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.884329:15,15:13-18,13-18:8,2,0,0:15,8:NULL:53.528:326.675,113.385:1.0936,1.0936:4.83461e-07,0.0599293,0.940159
-chr1	8099251	.	TTTGTTTGTTTGTTTG	.	.	.	END=8099266;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999251:4,4:4-4,4-4:14,4,0,0:4,14:NULL:88.6924:326.675,113.385:0.0,0.0:1e-45,0.000424862,0.999576
-chr1	8104863	.	AGGAAGGAAGGA	.	.	.	END=8104874;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,27,0,2:3,23:2,2:352.532:326.675,113.385:0.0,0.0:0.0,5.92066e-07,1.0
-chr1	8108241	.	TCTTCTTCTTCT	.	.	.	END=8108252;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999976:4,4:4-4,4-4:19,14,0,0:4,19:NULL:206.848:326.675,113.385:0.0,0.0:0.0,3.39215e-05,0.99997
-chr1	8108409	.	TCTTTCTTTCTT	.	.	.	END=8108420;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:237.13:326.675,113.385:0.0,0.0:0.0,2.04546e-10,1.0
-chr1	8109627	.	ATATATATATATAT	.	.	.	END=8109640;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:20,6,0,2:7,20:4,2:150.079:326.675,113.385:0.0,0.0:7.87813e-26,1.11203e-05,0.999993
-chr1	8111389	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8111422;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.771566:13,17:13-17,17-17:15,13,0,15:13,2|16,3|17,10:6,2|8,2|9,2|10,2|11,2|12,3|16,2:324.918:326.675,113.385:1.82038,0.0:4.76351e-10,0.91326,0.0868381
-chr1	8113654	.	TATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=8113685;RU=tatt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999572:8,8:7-8,7-8:14,18,0,8:8,14:3,1|4,1|5,2|7,3|8,1:281.979:326.675,113.385:0.345543,0.345543:0.0,0.000167456,0.999834
-chr1	8114127	.	TTGTTTGTTTGT	.	.	.	END=8114138;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.804:326.675,113.385:0.0,0.0:0.0,5.3239e-05,0.999948
-chr1	8114704	.	TTAATTAATTAATTAA	.	.	.	END=8114719;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999136:4,4:4-4,4-4:14,12,0,0:4,14:NULL:164.933:326.675,113.385:0.0,0.0:1.562e-42,0.000666524,0.999339
-chr1	8115132	.	AAATAAATAAAT	.	.	.	END=8115143;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.987:326.675,113.385:0.0,0.0:0.0,2.60132e-07,1.0
-chr1	8115975	.	AGAAAGAAAGAA	.	.	.	END=8115986;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:22,12,0,0:3,22:NULL:198.796:326.675,113.385:0.0,0.0:0.0,1.41773e-06,1.0
-chr1	8116438	.	GTTGTTGTTGTTGTT	.	.	.	END=8116452;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986297:5,5:5-5,5-5:10,13,0,0:5,10:NULL:158.594:326.675,113.385:0.0,0.0:1.25291e-30,0.00974018,0.990283
-chr1	8119064	.	TTTGTTTGTTTG	.	.	.	END=8119075;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,10,0,0:3,29:NULL:209.031:326.675,113.385:0.0,0.0:0.0,9.50918e-09,1.0
-chr1	8122477	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=8122534;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.327823:29,29:27-30,27-30:3,22,0,20:29,3:4,1|5,3|7,2|8,1|10,1|13,1|14,1|15,2|16,1|18,1|19,1|20,3|25,1|27,1:374.998:326.675,113.385:1.16277,1.16277:9.19554e-05,0.424578,0.575422
-chr1	8122771	.	ATCTATCTATCT	.	.	.	END=8122782;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:225.757:326.675,113.385:0.0,0.0:0.0,4.68736e-07,1.0
-chr1	8130079	.	ATCTATCTATCT	.	.	.	END=8130090;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,20,0,2:3,30:2,2:316.916:326.675,113.385:0.0,0.0:0.0,2.97695e-09,1.0
-chr1	8130171	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8130210;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.891619:20,20:18-20,18-20:10,15,0,7:19,2|20,8:6,1|8,1|11,3|12,1|19,1:251.968:326.675,113.385:0.62211,0.62211:3.15234e-10,0.0847739,0.915325
-chr1	8132817	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=8132848;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.958789:16,16:15-16,15-16:14,11,0,3:15,3|16,11:11,1|12,1|13,1:192.157:326.675,113.385:0.21692,0.21692:1.2706e-12,0.0390885,0.960981
-chr1	8135933	.	TATTTTATTTTATTT	.	.	.	END=8135947;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.95758:3,3:3-3,3-3:8,9,0,0:3,8:NULL:112.795:326.675,113.385:0.0,0.0:1.3255e-26,0.025304,0.974748
-chr1	8136804	.	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	.	END=8136863;RU=ttgtt;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999732:12,12:12-12,12-12:15,18,0,14:12,15:3,1|4,4|7,2|8,3|9,1|11,3:335.976:326.675,113.385:0.0,0.0:3e-45,0.000192081,0.999811
-chr1	8138672	.	AGCAGCAGCAGC	.	.	.	END=8138683;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:36,8,0,0:4,36:NULL:220.562:326.675,113.385:0.0,0.0:0.0,1.65479e-10,1.0
-chr1	8149815	.	TATATATATATATATATATATATATATATATATATATATATATATA	.	.	.	END=8149860;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.200773:23,23:22-24,22-24:2,4,0,2:23,2:6,1|12,1:61.958:326.675,113.385:0.828495,0.828495:0.00693742,0.433048,0.560128
-chr1	8152098	.	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=8152145;RU=ttta;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98957:12,12:12-12,12-12:10,8,0,9:12,10:4,1|5,1|6,1|7,1|8,2|10,1|11,2:181.088:326.675,113.385:0.0,0.0:2.07029e-22,0.00534625,0.994669
-chr1	8163528	.	GAGAGGAGAGGAGAG	.	.	.	END=8163542;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982968:3,3:3-3,3-3:9,10,0,0:3,9:NULL:130.81:326.675,113.385:0.0,0.0:3.91995e-27,0.0109445,0.989081
-chr1	8167006	.	AATTTAATTTAATTT	.	.	.	END=8167020;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:170.283:326.675,113.385:0.0,0.0:0.0,9.03986e-08,1.0
-chr1	8167756	.	ATATATATATATAT	ATATATATATATATAT	.	.	END=8167769;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.748426:7,8:7-7,7-8:9,5,0,0:7,7|8,2:NULL:86.5737:326.675,113.385:0.0,0.498798:2.74331e-13,0.00406086,0.995952
-chr1	8169940	.	AAATAAATAAATAAATAAAT	.	.	.	END=8169959;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,10,0,4:5,25:3,2|4,2:223.984:326.675,113.385:0.0,0.0:0.0,1.14854e-07,1.0
-chr1	8172972	.	CTTTCTTTCTTT	.	.	.	END=8172983;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.497:326.675,113.385:0.0,0.0:0.0,2.2279e-05,0.999979
-chr1	8173983	.	ATAAATAAATAA	.	.	.	END=8173994;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.598:326.675,113.385:0.0,0.0:0.0,5.37023e-06,0.999995
-chr1	8174320	.	AGGAAGGAAGGA	.	.	.	END=8174331;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:2-3,2-3:26,9,0,2:3,26:2,2:199.81:326.675,113.385:0.253975,0.253975:0.0,4.32072e-08,1.0
-chr1	8177036	.	AGGGAGGGAGGG	.	.	.	END=8177047;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997989:3,3:3-3,3-3:12,10,0,0:3,12:NULL:134.192:326.675,113.385:0.0,0.0:6.5965e-41,0.000969514,0.999035
-chr1	8179090	.	ACACACACACAC	.	.	.	END=8179101;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-14,6-14:29,8,0,2:6,29:5,1|6,1:207.577:326.675,113.385:3.72193,3.72193:0.0,5.69252e-09,1.0
-chr1	8183007	.	AAAGAAAGAAAG	.	.	.	END=8183018;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99913:3,3:3-3,3-3:13,6,0,0:3,13:NULL:108.628:326.675,113.385:0.0,0.0:3.9e-44,0.000489509,0.999514
-chr1	8186005	.	GAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=8186028;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.962329:12,12:12-14,12-14:17,21,0,5:11,2|12,13|13,2:5,1|6,1|9,3:321.879:326.675,113.385:0.681228,0.681228:4.07662e-16,0.00669391,0.993323
-chr1	8198691	.	AAACAAACAAAC	.	.	.	END=8198702;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,21,0,2:3,38:2,2:357.131:326.675,113.385:0.0,0.0:0.0,1.73423e-11,1.0
-chr1	8204150	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=8204173;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:6,6:6-6,6-6:16,10,0,5:6,16:3,1|4,4:192.651:326.675,113.385:0.0,0.0:0.0,0.000111831,0.999888
-chr1	8206337	.	CCACCACCACCA	.	.	.	END=8206348;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,10,0,0:4,22:NULL:178.452:326.675,113.385:0.0,0.0:0.0,1.7583e-06,1.0
-chr1	8223406	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8223453;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985847:24,24:24-25,24-25:11,11,0,12:24,11:4,1|5,1|6,4|11,1|14,1|17,1|18,1|21,1|23,1:244.728:326.675,113.385:0.195027,0.195027:3.05043e-12,0.00493001,0.995084
-chr1	8225347	.	TCCCTCCCTCCC	.	.	.	END=8225358;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:233.175:326.675,113.385:0.0,0.0:0.0,4.43822e-09,1.0
-chr1	8227632	.	TCCTTCCTTCCT	.	.	.	END=8227643;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,11,0,2:3,30:2,2:240.348:326.675,113.385:0.0,0.0:0.0,3.05243e-09,1.0
-chr1	8229590	.	TAATAATAATAA	.	.	.	END=8229601;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:165.956:326.675,113.385:0.0,0.0:0.0,1.92415e-06,1.0
-chr1	8234581	.	CTCTCTCTCTCTCT	.	.	.	END=8234594;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999659:7,7:6-7,6-7:24,11,0,3:6,2|7,22:5,2|6,1:229.004:326.675,113.385:0.294378,0.294378:1e-45,0.000343236,0.999659
-chr1	8242991	.	TTGTTGTTGTTGTTG	.	.	.	END=8243005;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999806:5,5:5-5,5-5:15,13,0,3:5,15:4,3:199.113:326.675,113.385:0.0,0.0:1.78e-43,0.000116566,0.999887
-chr1	8246899	.	AAGCAAGCAAGCAAGC	.	.	.	END=8246914;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,15,0,3:4,30:2,1|3,2:274.711:326.675,113.385:0.0,0.0:0.0,5.01533e-09,1.0
-chr1	8246965	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	.	END=8247014;RU=aagaa;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.898434:10,10:7-10,7-10:6,16,0,17:10,6:3,1|4,2|5,3|6,2|7,2|8,5|9,2:289.122:326.675,113.385:1.44541,1.44541:3.21687e-14,0.052063,0.948018
-chr1	8266031	.	GTGGTGGTGGTG	.	.	.	END=8266042;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997056:4,4:4-4,4-4:12,11,0,0:4,12:NULL:151.09:326.675,113.385:0.0,0.0:2.38039e-40,0.00193777,0.99807
-chr1	8266249	.	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	.	.	.	END=8266303;RU=caaaa;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985697:11,11:11-11,11-11:11,13,0,8:11,11:3,1|4,2|5,2|6,2|8,1:230.731:326.675,113.385:0.0,0.0:4.34179e-34,0.0130186,0.987009
-chr1	8266615	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8266654;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.629295:20,21:19-20,19-21:16,11,0,10:19,4|20,9|21,3:4,1|7,2|11,1|13,1|14,1|15,1|16,1|19,2:266.552:326.675,113.385:0.253975,0.783868:6.61717e-12,0.131809,0.868288
-chr1	8277000	.	ACCCACCCACCC	.	.	.	END=8277011;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.932852:3,3:3-3,3-3:7,16,0,0:3,7:NULL:175.271:326.675,113.385:0.0,0.0:2.30008e-19,0.0474448,0.952631
-chr1	8279683	.	CTCTCTCTCTCT	.	.	.	END=8279694;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:31,15,0,0:6,31:NULL:262.196:326.675,113.385:0.0,0.0:0.0,5.96934e-09,1.0
-chr1	8279713	.	TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC	.	.	.	END=8279762;RU=tcctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.892845:10,10:3-10,3-10:8,20,0,18:10,8:2,4|3,3|4,3|5,1|6,4|7,2|8,1:347.23:326.675,113.385:2.778,2.778:1.45748e-16,0.0949286,0.905171
-chr1	8280732	.	CACACACACACACACACACACA	.	.	.	END=8280753;RU=ca;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929785:11,11:11-12,11-12:21,6,0,4:11,18|12,3:5,2|6,1|10,1:187.392:326.675,113.385:0.398507,0.398507:3.70661e-29,5.56129e-06,0.999995
-chr1	8282353	.	GGGTGGGTGGGT	.	.	.	END=8282364;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987199:3,3:3-3,3-3:10,17,0,0:3,10:NULL:188.791:326.675,113.385:0.0,0.0:2.35018e-28,0.00808223,0.991936
-chr1	8290480	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=8290543;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997484:16,16:16-16,16-16:12,15,0,18:16,12:3,2|5,1|6,2|8,3|9,2|10,3|13,1|15,3|16,1:324.595:326.675,113.385:0.0,0.0:1.61841e-34,0.000532592,0.999469
-chr1	8290943	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	.	END=8291032;RU=tct;PERIOD=3;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.280789:30,30:26-30,26-30:3,9,0,17:30,3:5,2|6,1|8,1|9,3|12,1|14,2|16,1|19,1|20,1|21,1|23,2|28,1:227.676:326.675,113.385:1.32066,1.32066:5.78395e-06,0.449715,0.550385
-chr1	8293500	.	TGGTGGTGGTGG	.	.	.	END=8293511;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999984:4,4:4-4,4-4:19,13,0,0:4,19:NULL:192.347:326.675,113.385:0.0,0.0:0.0,2.57329e-05,0.999978
-chr1	8295438	.	CTGCCTGCCTGC	.	.	.	END=8295449;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997312:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.932:326.675,113.385:0.0,0.0:2.08556e-37,0.00150062,0.998504
-chr1	8296427	.	GGTAGGTAGGTA	.	.	.	END=8296438;RU=ggta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.415:326.675,113.385:0.0,0.0:0.0,1.54454e-07,1.0
-chr1	8303139	.	ACCACCACCACCACCACC	.	.	.	END=8303156;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999411:6,6:4-6,4-6:14,7,0,4:6,14:4,3|5,1:145.61:326.675,113.385:0.851255,0.851255:3.77311e-40,0.000251334,0.99975
-chr1	8303362	.	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	.	.	.	END=8303409;RU=ataa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.571462:12,12:11-14,11-14:4,9,0,8:12,4:3,1|6,1|7,1|8,3|9,1|11,1:157.02:326.675,113.385:1.11535,1.11535:6.3577e-09,0.241148,0.758872
-chr1	8303901	.	AACAACAACAACAAC	.	.	.	END=8303915;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997124:5,5:5-5,5-5:12,10,0,2:5,12:4,2:160.303:326.675,113.385:0.0,0.0:7.74398e-31,0.00124512,0.998761
-chr1	8314805	.	AATAAAATAAAATAA	.	.	.	END=8314819;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:138.841:326.675,113.385:0.0,0.0:0.0,1.05149e-05,0.999993
-chr1	8314957	.	CACAACACAACACAA	.	.	.	END=8314971;RU=cacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:3,3:3-3,3-3:18,9,0,2:3,18:2,1|3,1:165.01:326.675,113.385:0.0,0.0:0.0,7.22613e-06,0.999994
-chr1	8316961	.	TATATATATATATA	.	.	.	END=8316974;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999463:7,7:7-8,7-8:15,5,0,0:7,15:NULL:108.023:326.675,113.385:0.195027,0.195027:4.76262e-23,0.000320093,0.999682
-chr1	8321168	.	TTTGTTTGTTTG	.	.	.	END=8321179;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.93009:3,3:3-3,3-3:6,15,0,5:3,6:2,5:193.937:326.675,113.385:0.0,0.0:1.02792e-20,0.0346144,0.965449
-chr1	8322155	.	CAACAACAACAACAA	.	.	.	END=8322169;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,7,0,2:5,24:3,1|4,1:173.71:326.675,113.385:0.0,0.0:0.0,2.6353e-07,1.0
-chr1	8322582	.	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	.	.	.	END=8322666;RU=tctgt;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.889489:17,17:17-17,17-17:6,23,0,19:17,6:2,1|3,1|5,1|6,2|7,3|9,1|10,1|11,1|12,3|13,1|15,1|16,2|17,1:381.173:326.675,113.385:0.278639,0.278639:2.99727e-17,0.0723204,0.927774
-chr1	8325886	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=8325921;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985159:9,9:8-9,8-9:9,13,0,8:9,9:2,1|4,1|6,1|7,4|8,1:214.639:326.675,113.385:0.45695,0.45695:5.96041e-20,0.00861212,0.991405
-chr1	8328000	.	CAACAACAACAA	.	.	.	END=8328011;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,15,0,0:4,20:NULL:214.427:326.675,113.385:0.0,0.0:0.0,7.2502e-06,0.999994
-chr1	8329731	.	ATAAATAAATAA	.	.	.	END=8329742;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,14,0,0:3,30:NULL:246.505:326.675,113.385:0.0,0.0:0.0,5.56693e-09,1.0
-chr1	8330089	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8330126;RU=ag;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.705345:19,19:19-20,19-20:12,12,0,6:19,10|20,2:4,1|8,1|9,1|11,1|13,1|16,1:216.776:326.675,113.385:0.452422,0.452422:1.00315e-13,0.00259924,0.997406
-chr1	8331327	.	TGTCTGTCTGTC	.	.	.	END=8331338;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,4:3,21:2,4:233.26:326.675,113.385:0.0,0.0:0.0,1.12939e-06,1.0
-chr1	8332124	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8332161;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.317539:19,24:19-19,19-25:16,20,0,16:18,2|19,14:4,1|6,2|8,1|9,1|11,2|12,1|14,3|15,1|17,1|18,1|19,1|24,1:396.996:326.675,113.385:0.0,2.71258:4.67477e-25,7.44892e-06,0.999994
-chr1	8333431	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	.	END=8333470;RU=tttgt;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999865:8,8:8-9,8-9:16,15,0,10:8,16:3,2|4,3|6,2|7,3:282.05:326.675,113.385:0.382696,0.382696:0.0,7.31916e-05,0.999926
-chr1	8334958	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=8334981;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.571229:6,6:5-6,5-6:20,6,0,8:5,3|6,17:3,2|4,2|5,4:204.081:326.675,113.385:0.469019,0.469019:1.44932e-37,0.428869,0.571225
-chr1	8338614	.	ATAAATAAATAAATAAATAA	.	.	.	END=8338633;RU=ataa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:2,1|3,2|4,1:178.83:326.675,113.385:0.0,0.0:0.0,2.26863e-06,1.0
-chr1	8338698	.	AATAATAATAAT	.	.	.	END=8338709;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999899:4,4:4-4,4-4:17,7,0,0:4,17:NULL:129.851:326.675,113.385:0.0,0.0:0.0,7.15077e-05,0.999932
-chr1	8339191	.	CTGTGCTGTGCTGTG	.	.	.	END=8339205;RU=ctgtg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.963:326.675,113.385:0.0,0.0:0.0,6.85317e-06,0.999994
-chr1	8339827	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8339862;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980216:18,18:14-19,14-19:10,6,0,8:18,10:6,2|7,1|9,2|12,2|17,1:159.194:326.675,113.385:1.50632,1.50632:4.74857e-16,0.00819059,0.99183
-chr1	8339980	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT	.	.	END=8340019;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.601332:19,20:19-21,20-21:5,5,0,2:19,2|20,3:4,1|11,1:85.3542:326.675,113.385:0.753387,0.40582:0.0111203,0.695401,0.293511
-chr1	8345278	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=8345305;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:6-7,6-7:23,10,0,6:7,23:4,1|5,1|6,4:239.707:326.675,113.385:0.29703,0.29703:0.0,4.11408e-07,1.0
-chr1	8353434	.	TTTGTTTGTTTGTTTG	.	.	.	END=8353449;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999895:4,4:4-4,4-4:17,9,0,0:4,17:NULL:151.271:326.675,113.385:0.0,0.0:9.70261e-38,8.64309e-05,0.999917
-chr1	8354049	.	AAGCAAGCAAGC	.	.	.	END=8354060;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.945666:3,3:3-3,3-3:7,4,0,2:3,7:2,2:78.2415:326.675,113.385:0.0,0.0:2.55084e-23,0.0192365,0.980801
-chr1	8357311	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8357328;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:26,12,0,4:9,26:6,1|7,1|8,2:242.065:326.675,113.385:0.0,0.0:0.0,6.70531e-08,1.0
-chr1	8366194	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=8366227;RU=ct;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.763277:17,17:16-17,16-17:21,12,0,8:16,6|17,15:4,1|9,2|11,1|12,1|13,1|14,1|16,1:277.096:326.675,113.385:0.696878,0.696878:3.64364e-12,0.236711,0.763312
-chr1	8366995	.	ATATATATATATATATATATATATATATATATAT	.	.	.	END=8367028;RU=at;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.729332:17,17:17-17,17-17:6,2,0,0:17,6:NULL:46.4011:326.675,113.385:0.0,0.0:1.36574e-06,0.105537,0.894565
-chr1	8371543	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	.	END=8371606;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.685203:16,16:16-16,16-16:5,8,0,8:16,5:5,2|7,1|10,1|11,2|12,1|14,1:155.276:326.675,113.385:0.19802,0.19802:1.05189e-07,0.206014,0.794033
-chr1	8374412	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=8374432;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999219:7,7:7-7,7-7:13,14,0,6:7,13:3,1|4,2|6,3:226.934:326.675,113.385:0.0,0.0:4.64972e-32,0.000408752,0.999592
-chr1	8374431	.	TGATGATGATGATGATGA	.	.	.	END=8374448;RU=tga;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999992:6,6:6-6,6-6:18,11,0,5:6,18:3,1|4,3|5,1:213.13:326.675,113.385:0.0,0.0:0.0,1.50354e-05,0.999986
-chr1	8378065	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	.	END=8378114;RU=tcttt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.902909:10,10:9-10,9-10:7,8,0,6:10,7:2,1|3,1|5,1|6,1|7,1|8,1:149.552:326.675,113.385:0.607117,0.607117:1.93876e-22,0.0627019,0.937389
-chr1	8383454	.	TAATTAATTAATTAAT	.	.	.	END=8383469;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999182:4,4:4-4,4-4:14,10,0,0:4,14:NULL:152.232:326.675,113.385:0.0,0.0:1.50491e-40,0.000573469,0.999431
-chr1	8384813	.	TGTGTGTGTGTG	.	.	.	END=8384824;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:26,17,0,0:6,26:NULL:264.41:326.675,113.385:0.139319,0.139319:0.0,1.56232e-07,1.0
-chr1	8389556	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	.	END=8389603;RU=tatc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966978:12,12:11-12,11-12:8,19,0,13:12,8:3,3|5,2|8,3|10,2|11,3:308.233:326.675,113.385:0.419363,0.419363:6.27891e-11,0.0183287,0.981709
-chr1	8389896	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	.	END=8389935;RU=atct;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999886:10,10:10-10,10-10:16,22,0,13:10,16:4,3|5,1|6,2|7,2|8,2|9,3:363.177:326.675,113.385:0.0,0.0:4.44127e-38,8.00208e-05,0.999924
-chr1	8389961	.	TTTGTTTGTTTG	.	.	.	END=8389972;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:348.37:326.675,113.385:0.0,0.0:0.0,3.40439e-08,1.0
-chr1	8409196	.	AAAAACAAAAACAAAAAC	.	.	.	END=8409213;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.983591:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.7495:326.675,113.385:0.0,0.0:3.68951e-30,0.00828025,0.991741
-chr1	8410948	.	CGCTCGCTCGCT	.	.	.	END=8410959;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,19,0,6:3,39:2,6:366.886:326.675,113.385:0.0,0.0:0.0,6.181e-12,1.0
-chr1	8413506	.	TTATTTATTTAT	.	.	.	END=8413517;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999463:3,3:3-3,3-3:14,8,0,0:3,14:NULL:128.065:326.675,113.385:0.0,0.0:0.0,0.000323489,0.999681
-chr1	8415286	.	AAACAAACAAACAAACAAAC	.	.	.	END=8415305;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:2,1|3,5|4,1:263.434:326.675,113.385:0.0,0.0:0.0,8.23304e-07,1.0
-chr1	8418293	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=8418328;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:24,13,0,6:9,24:3,1|4,1|6,1|7,1|8,2:265.715:326.675,113.385:0.0,0.0:0.0,3.37734e-07,1.0
-chr1	8419081	.	AAATAAATAAAT	.	.	.	END=8419092;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999885:3,3:2-3,2-3:16,13,0,0:3,16:NULL:178.943:326.675,113.385:0.419363,0.419363:0.0,7.18237e-05,0.999932
-chr1	8420846	.	AAATAAATAAAT	.	.	.	END=8420857;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999923:3,3:3-3,3-3:17,11,0,0:3,17:NULL:163.458:326.675,113.385:0.0,0.0:0.0,4.61361e-05,0.999956
-chr1	8423083	.	ATATATATATATATATATATATATAT	.	.	.	END=8423108;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.596815:13,13:11-14,11-14:14,6,0,0:11,2|12,2|13,8|14,2:NULL:135.215:326.675,113.385:0.827074,0.827074:9.63291e-06,0.326822,0.673181
-chr1	8424107	.	CCAGCCAGCCAG	.	.	.	END=8424118;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,5,0,0:3,22:NULL:132.923:326.675,113.385:0.0,0.0:0.0,9.49426e-07,1.0
-chr1	8433296	.	TATTTATTTATT	.	.	.	END=8433307;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980539:3,3:3-3,3-3:9,1,0,0:3,9:NULL:45.09:326.675,113.385:0.0,0.0:1.04721e-29,0.00803098,0.991988
-chr1	8433511	.	TATATATATATATATATATA	TATATATATATATATATATATA	.	.	END=8433530;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.143587:11,11:8-11,8-11:2,5,0,0:11,2:NULL:53.8357:326.675,113.385:0.842923,0.842923:0.000431743,0.502089,0.497491
-chr1	8433926	.	TATATATATATA	.	.	.	END=8433937;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999781:6,6:6-6,6-6:16,5,0,0:6,16:NULL:109.602:326.675,113.385:0.139319,0.139319:9.12765e-26,0.000111527,0.999888
-chr1	8456266	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8456293;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99989:14,14:11-14,11-14:17,4,0,7:14,17:4,1|5,1|8,1|9,1|10,2|13,1:166.18:326.675,113.385:1.00465,1.00465:4.58367e-29,4.43602e-05,0.999956
-chr1	8470720	.	TCTCTCTCTCTCTC	.	.	.	END=8470733;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:7,7:7-7,7-7:19,15,0,0:7,19:NULL:221.843:326.675,113.385:0.0,0.0:8.84e-43,1.81607e-05,0.999985
-chr1	8470767	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8470826;RU=ct;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0222805:26,26:25-29,25-29:0,11,0,8:NULL:6,3|7,1|11,1|15,1|16,1|17,1:174.168:326.675,113.385:1.64368,1.64368:0.722255,0.257109,0.0206627
-chr1	8470857	.	CTCTCTCTCTCTCTCT	.	.	.	END=8470872;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.868555:8,8:8-8,8-8:6,18,0,3:8,6:6,3:216.942:326.675,113.385:0.0,0.0:1.3158e-11,0.0731223,0.926973
-chr1	8477191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8477250;RU=ga;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.513868:29,30:23-30,23-30:4,9,0,5:29,2|30,2:7,1|12,1|15,1|18,1|19,1:147.648:326.675,113.385:1.81115,1.95434:0.0172261,0.766209,0.216644
-chr1	8480096	.	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	.	.	END=8480191;RU=agaaagga;PERIOD=8;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.364967:6,10:6-11,9-11:4,11,0,18:6,4:2,1|3,2|4,1|5,2|6,3|7,1|8,1|9,5|10,2:242.488:326.675,113.385:0.899956,0.56427:0.61593,0.38413,1.79851e-19
-chr1	8496447	.	TCTCTCTCTCTC	.	.	.	END=8496458;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.068:326.675,113.385:0.0,0.0:7e-45,3.71249e-06,1.0
-chr1	8498887	.	TGTGTGTGTGTG	.	.	.	END=8498898;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999971:6,6:6-6,6-6:18,5,0,0:6,18:NULL:113.239:326.675,113.385:0.0,0.0:8.34546e-39,2.40389e-05,0.999979
-chr1	8500395	.	AGGAAGGAAGGA	.	.	.	END=8500406;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999531:3,3:3-3,3-3:14,11,0,2:3,14:2,2:170.995:326.675,113.385:0.0,0.0:0.0,0.000248712,0.999751
-chr1	8503531	.	TAAATAAATAAA	.	.	.	END=8503542;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998985:3,3:3-3,3-3:13,9,0,4:3,13:2,4:161.383:326.675,113.385:0.0,0.0:1.3e-43,0.000375542,0.999628
-chr1	8504809	.	TTGTTGTTGTTGTTG	.	.	.	END=8504823;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:23,8,0,6:5,23:3,1|4,5:210.727:326.675,113.385:0.0,0.0:0.0,2.7635e-07,1.0
-chr1	8528507	.	TTGTTGTTGTTG	.	.	.	END=8528518;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999939:4,4:4-4,4-4:17,7,0,2:4,17:3,2:151.591:326.675,113.385:0.0,0.0:0.0,3.18312e-05,0.999971
-chr1	8529981	.	AACCAACCAACCAACC	.	.	.	END=8529996;RU=aacc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985496:4,4:4-4,4-4:10,14,0,0:4,10:NULL:167.18:326.675,113.385:0.0,0.0:3.47962e-34,0.0120016,0.988025
-chr1	8536034	.	AAAACAAAACAAAAC	.	.	.	END=8536048;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,15,0,0:3,23:NULL:233.041:326.675,113.385:0.0,0.0:0.0,2.21728e-06,1.0
-chr1	8536113	.	CAACAACAACAACAACAACAACAACAA	.	.	.	END=8536139;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999281:9,9:9-9,9-9:14,16,0,4:9,14:4,1|5,1|8,2:234.098:326.675,113.385:0.0,0.0:2.68761e-26,0.000352468,0.999651
-chr1	8536661	.	ACAACAACAACA	.	.	.	END=8536672;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999897:4,4:4-4,4-4:16,8,0,3:4,16:3,3:158.328:326.675,113.385:0.0,0.0:0.0,3.98677e-05,0.999963
-chr1	8536682	.	CAAACAAACAAA	.	.	.	END=8536693;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999723:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.967:326.675,113.385:0.0,0.0:0.0,0.000151341,0.99985
-chr1	8537537	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=8537556;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991856:4,4:4-4,4-4:10,8,0,2:4,10:3,2:128.224:326.675,113.385:0.0,0.0:6.05885e-31,0.00459612,0.995416
-chr1	8543734	.	AAATAAATAAAT	.	.	.	END=8543745;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997637:3,3:3-3,3-3:12,4,0,0:3,12:NULL:81.7413:326.675,113.385:0.0,0.0:2.84343e-35,0.00106447,0.998938
-chr1	8554881	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=8554988;RU=agaggc;PERIOD=6;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.994923:13,18:4-13,17-18:5,18,0,25:13,3|17,2:3,2|4,2|5,1|7,5|8,4|9,2|10,1|12,1|13,2|14,1|15,2|16,1|18,1:373.705:326.675,113.385:2.97959,0.547696:1.91093e-05,0.999985,2.24371e-15
-chr1	8557824	.	ACACACACACACAC	.	.	.	END=8557837;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:21,11,0,2:7,21:4,1|6,1:197.338:326.675,113.385:0.139319,0.139319:1.6042e-41,2.70255e-06,1.0
-chr1	8567230	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=8567268;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.809962:13,13:13-13,13-13:6,6,0,2:13,6:3,1|9,1:98.1398:326.675,113.385:0.0,0.0:1.63673e-10,0.119958,0.880145
-chr1	8574197	.	CACACACACACA	.	.	.	END=8574208;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,9,0,2:6,25:4,2:198.818:326.675,113.385:0.0,0.0:0.0,2.05172e-07,1.0
-chr1	8575616	.	TGGTGGTGGTGGTGGTGG	.	.	.	END=8575633;RU=tgg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999978:6,6:6-6,6-6:18,8,0,2:6,18:4,1|5,1:159.315:326.675,113.385:0.0,0.0:0.0,1.73442e-05,0.999986
-chr1	8580889	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8580912;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999625:12,12:12-13,12-13:24,10,0,5:12,22|13,2:5,3|11,2:236.795:326.675,113.385:0.284901,0.284901:6.62828e-34,5.70766e-07,1.0
-chr1	8584648	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=8584699;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.24064:26,26:23-26,23-26:2,2,0,5:26,2:5,1|8,1|9,1|14,1|18,1:66.5773:326.675,113.385:0.772658,0.772658:0.000298698,0.390389,0.609378
-chr1	8584700	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATAT	.	.	END=8584747;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.000252147:6,6:6-6,6-6:0,1,0,0:NULL:NULL:8.42831:326.675,113.385:0.0,0.0:0.107513,0.489833,0.402853
-chr1	8585797	.	TATTTATTTATTTATT	.	.	.	END=8585812;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998301:4,4:4-4,4-4:13,11,0,0:4,13:NULL:151.104:326.675,113.385:0.0,0.0:9.11e-43,0.00118285,0.998823
-chr1	8586014	.	TTTATTTATTTA	.	.	.	END=8586025;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.173:326.675,113.385:0.0,0.0:0.0,7.8491e-05,0.999925
-chr1	8594736	.	TGTGTGTGTGTGTG	.	.	.	END=8594749;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99987:7,7:7-7,7-7:16,8,0,5:7,16:4,1|5,2|6,2:178.756:326.675,113.385:0.0,0.0:7.19342e-32,4.09985e-05,0.999963
-chr1	8596349	.	TGTGTGTGTGTG	.	.	.	END=8596360;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986306:6,6:6-6,6-6:10,10,0,0:6,10:NULL:133.658:326.675,113.385:0.0,0.0:4.46305e-24,0.00791973,0.9921
-chr1	8597826	.	CACACACACACACACACACACACACA	.	.	.	END=8597851;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.40379:13,13:13-14,13-14:3,3,0,4:13,3:5,1|11,1|12,2:69.6071:326.675,113.385:0.518267,0.518267:6.64642e-05,0.161811,0.838196
-chr1	8614957	.	AAACAAACAAACAAACAAAC	.	.	.	END=8614976;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995445:5,5:5-5,5-5:11,10,0,2:5,11:4,2:149.524:326.675,113.385:0.0,0.0:6.34409e-38,0.00224629,0.997761
-chr1	8619173	.	GTTGTTGTTGTTGTT	.	.	.	END=8619187;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997823:5,5:5-5,5-5:12,6,0,2:5,12:4,2:118.793:326.675,113.385:0.0,0.0:3.09658e-36,0.000974604,0.999028
-chr1	8628070	.	TTTGTTTGTTTG	.	.	.	END=8628081;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996572:3,3:3-3,3-3:11,5,0,2:3,11:2,2:106.536:326.675,113.385:0.0,0.0:2.83415e-36,0.00109878,0.998906
-chr1	8628100	.	TTGTTTTGTTTTGTT	.	.	.	END=8628114;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999719:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.395:326.675,113.385:0.0,0.0:0.0,0.000150872,0.99985
-chr1	8628129	.	TTTATTTTTATTTTTATT	.	.	.	END=8628146;RU=tttatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999864:3,3:3-3,3-3:16,3,0,0:3,16:NULL:95.0823:326.675,113.385:0.0,0.0:0.0,7.19751e-05,0.999932
-chr1	8631314	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8631341;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988226:14,14:13-14,13-14:18,5,0,2:13,3|14,15:7,1|11,1:144.884:326.675,113.385:0.236383,0.236383:1.25388e-15,0.0117186,0.988308
-chr1	8631352	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8631373;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.679657:11,11:10-12,10-12:14,5,0,3:10,2|11,10|12,2:5,1|10,2:139.777:326.675,113.385:0.653165,0.653165:1.8551e-16,0.0629716,0.937121
-chr1	8631769	.	TTTTGTTTTGTTTTG	.	.	.	END=8631783;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998185:3,3:3-3,3-3:12,9,0,2:3,12:2,2:143.831:326.675,113.385:0.0,0.0:2.94001e-37,0.000914917,0.999089
-chr1	8631787	.	GTTTGTTTGTTT	.	.	.	END=8631798;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:172.164:326.675,113.385:0.0,0.0:0.0,1.10055e-05,0.999993
-chr1	8632668	.	CCCACCCACCCA	CCCACCCACCCACCCACCCA	.	.	END=8632679;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:1.0:3,5:3-3,5-5:31,5,0,0:3,18|5,13:NULL:191.55:326.675,113.385:0.0,0.0:0.0,1.0066e-26,1.0
-chr1	8633725	.	ATAAATAAATAA	.	.	.	END=8633736;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999912:3,3:3-3,3-3:17,7,0,0:3,17:NULL:135.44:326.675,113.385:0.0,0.0:0.0,5.65693e-05,0.999947
-chr1	8633735	.	AACAACAACAAC	.	.	.	END=8633746;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999715:4,4:4-4,4-4:16,10,0,0:4,16:NULL:157.321:326.675,113.385:0.0,0.0:1e-45,0.000207364,0.999796
-chr1	8635079	.	ACCCACCCACCC	.	.	.	END=8635090;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.808579:3,3:3-3,3-3:5,6,0,0:3,5:NULL:73.0765:326.675,113.385:0.0,0.0:7.69984e-14,0.0907137,0.909384
-chr1	8641425	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8641448;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998552:12,12:12-12,12-12:13,2,0,2:12,13:6,1|11,1:88.402:326.675,113.385:0.0,0.0:6.60585e-23,0.000666587,0.999339
-chr1	8642579	.	AAATAAATAAAT	.	.	.	END=8642590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999431:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.869:326.675,113.385:0.0,0.0:1.361e-41,0.00026199,0.999742
-chr1	8642988	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8643027;RU=tc;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.41447:20,20:19-20,19-20:8,11,0,8:19,3|20,5:6,1|8,1|11,1|13,1|14,1|16,1|18,1|19,1:206.384:326.675,113.385:0.484441,0.484441:3.2159e-05,0.557393,0.442685
-chr1	8643034	.	TCTATCTATCTA	.	.	.	END=8643045;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999628:3,3:2-3,2-3:15,11,0,0:3,15:NULL:161.037:326.675,113.385:0.323567,0.323567:7.78753e-29,0.000218365,0.999782
-chr1	8643653	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=8643682;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:6,6:6-6,6-6:17,11,0,5:6,17:3,3|4,1|5,1:207.421:326.675,113.385:0.139319,0.139319:1e-45,5.03197e-05,0.999949
-chr1	8643693	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8643718;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.456917:13,15:13-13,13-15:19,12,0,6:12,2|13,17:5,1|6,1|8,1|10,1|12,1|15,1:257.188:326.675,113.385:0.0,1.01474:4.28029e-29,3.84308e-06,1.0
-chr1	8646828	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	.	END=8646863;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998611:9,9:4-9,4-9:13,6,0,4:9,13:6,1|7,2|8,1:137.185:326.675,113.385:2.04948,2.04948:8.80789e-28,0.000791479,0.999211
-chr1	8650375	.	ACACACACACACACACACACACAC	.	.	.	END=8650398;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.984644:12,12:11-12,11-12:17,3,0,4:11,3|12,14:8,1|11,3:137.599:326.675,113.385:0.270063,0.270063:5.28161e-17,0.0152271,0.984803
-chr1	8650639	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATAT	.	.	END=8650678;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0175477:16,16:16-20,16-20:0,2,0,0:NULL:NULL:17.2343:326.675,113.385:0.900283,0.900283:0.271692,0.499525,0.228792
-chr1	8650679	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=8650710;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.436188:16,16:16-16,16-16:3,3,0,2:16,3:11,1|15,1:54.5607:326.675,113.385:0.19802,0.19802:1.21553e-05,0.246219,0.753781
-chr1	8651209	.	AATAAATAAATA	.	.	.	END=8651220;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,5,0,3:3,24:2,3:160.953:326.675,113.385:0.0,0.0:0.0,1.48101e-07,1.0
-chr1	8651810	.	AAAACAAAAACAAAAACA	.	.	.	END=8651827;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989372:3,3:3-3,3-3:10,8,0,0:3,10:NULL:112.49:326.675,113.385:0.0,0.0:6.9492e-33,0.0064146,0.993602
-chr1	8653498	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	.	END=8653537;RU=aagaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998573:8,8:8-8,8-8:13,12,0,5:8,13:3,1|4,1|5,2|7,1:202.014:326.675,113.385:0.0,0.0:4.65052e-38,0.000786841,0.999218
-chr1	8654962	.	CTCTCTCCTCTCTCCTCTCTC	.	.	.	END=8654982;RU=ctctctc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99915:3,3:3-3,3-3:14,11,0,0:3,14:NULL:158.356:326.675,113.385:0.0,0.0:5.11259e-39,0.00063414,0.99937
-chr1	8655539	.	TGTATATACAGTTTGTATATACAGTTTGTATATACAGTT	.	.	.	END=8655577;RU=tgtatatacagtt;PERIOD=13;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,11,0,0:3,27:NULL:220.313:326.675,113.385:0.0,0.0:7.89224e-34,2.1361e-07,1.0
-chr1	8661278	.	TCTGCGCACTGCCTCTCTGCGCACTGCCTCTCTGCGCACTGCCTC	.	.	.	END=8661322;RU=tctgcgcactgcctc;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999987:3,3:3-3,3-3:20,7,0,0:3,20:NULL:149.294:326.675,113.385:0.0,0.0:1.29928e-24,2.25915e-05,0.999979
-chr1	8662879	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8662932;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.79467:27,27:26-28,26-28:6,9,0,13:27,6:8,1|11,1|13,1|14,1|15,1|16,2|17,1|18,2|22,1|23,1|27,1:210.896:326.675,113.385:0.464609,0.464609:1.75214e-14,0.0702106,0.929885
-chr1	8670288	.	AAATAAATAAAT	.	.	.	END=8670299;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.846:326.675,113.385:0.0,0.0:0.0,7.53837e-06,0.999994
-chr1	8675250	.	CACACACACACACACACA	.	.	.	END=8675267;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.69922:9,9:5-10,5-10:20,9,0,0:5,2|8,2|9,14|10,2:NULL:190.405:326.675,113.385:1.99244,1.99244:2.03531e-21,0.280196,0.719807
-chr1	8675272	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=8675305;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.907371:17,17:15-18,15-18:12,11,0,4:16,2|17,10:4,1|13,1|15,1|16,1:191.535:326.675,113.385:0.615775,0.615775:1.33605e-10,0.0899302,0.910167
-chr1	8675459	.	ACAGAAACACAGAAACACAGAAAC	.	.	.	END=8675482;RU=acagaaac;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999268:3,3:3-3,3-3:13,10,0,2:3,13:2,2:159.691:326.675,113.385:0.0,0.0:9.36e-43,0.000455439,0.999546
-chr1	8675986	.	ATTTATTTATTT	.	.	.	END=8675997;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999964:3,3:3-3,3-3:18,12,0,0:3,18:NULL:186.787:326.675,113.385:0.0,0.0:0.0,2.80001e-05,0.999972
-chr1	8676389	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=8676418;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999914:6,6:6-6,6-6:17,9,0,8:6,17:3,3|4,2|5,3:213.522:326.675,113.385:0.0,0.0:5.66594e-34,3.7178e-05,0.999964
-chr1	8678460	.	TGTGTGTGTGTGTGTGTGTG	.	.	.	END=8678479;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.896921:10,10:10-11,10-11:7,4,0,2:10,7:5,1|8,1:79.5285:326.675,113.385:0.475866,0.475866:1.70654e-11,0.0425545,0.957517
-chr1	8678493	.	TACATATATACATATATACATATA	.	.	.	END=8678516;RU=tacatata;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992139:3,3:3-3,3-3:10,4,0,2:3,10:2,2:88.166:326.675,113.385:0.0,0.0:2.3385e-30,0.00314205,0.996867
-chr1	8679768	.	ATAAAATAAAATAAA	.	.	.	END=8679782;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.886:326.675,113.385:0.0,0.0:0.0,3.57574e-07,1.0
-chr1	8681683	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	.	END=8681750;RU=aagg;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.280034:17,17:13-17,13-17:2,17,0,19:17,2:2,1|4,1|5,2|6,2|7,3|8,1|10,3|12,1|13,3|15,2:298.812:326.675,113.385:1.83337,1.83337:2.37018e-05,0.427834,0.572237
-chr1	8682359	.	CACACACACACACACACACA	.	.	.	END=8682378;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999694:10,10:10-11,10-11:15,17,0,8:10,15:6,2|7,1|8,1|9,3|10,1:286.511:326.675,113.385:0.169767,0.169767:4.6019e-29,8.81946e-05,0.999911
-chr1	8682430	.	CTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8682441;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.451644:6,13:6-6,5-13:14,17,0,2:5,2|6,12:5,1|13,1:252.805:326.675,113.385:0.0,3.78075:7.49433e-20,0.000777866,0.999226
-chr1	8682935	.	CACACACACACACACA	.	.	.	END=8682950;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999976:8,8:8-8,8-8:18,12,0,2:8,18:4,1|6,1:195.974:326.675,113.385:0.0,0.0:1.15451e-31,2.82206e-05,0.999972
-chr1	8703164	.	GGCTCAGGGCTCAGGGCTCAG	.	.	.	END=8703184;RU=ggctcag;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,17,0,3:3,20:2,3:257.668:326.675,113.385:0.0,0.0:0.0,6.52146e-06,0.999994
-chr1	8704534	.	AACAAACAAACA	.	.	.	END=8704545;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,8,0,0:3,28:NULL:181.495:326.675,113.385:0.0,0.0:0.0,2.64883e-08,1.0
-chr1	8705430	.	CAAACAAACAAA	.	.	.	END=8705441;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999935:3,3:3-3,3-3:17,12,0,0:3,17:NULL:172.513:326.675,113.385:0.0,0.0:0.0,4.61238e-05,0.999956
-chr1	8707303	.	ATGATGATGATG	.	.	.	END=8707314;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:196.225:326.675,113.385:0.0,0.0:0.0,3.46047e-07,1.0
-chr1	8713399	.	AGCAGCAGCAGC	.	.	.	END=8713410;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:222.677:326.675,113.385:0.0,0.0:0.0,2.32344e-07,1.0
-chr1	8714830	.	CATAACATAACATAACATAACATAA	.	.	.	END=8714854;RU=cataa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.942765:5,5:5-5,5-5:7,8,0,6:5,7:2,1|3,3|4,2:140.677:326.675,113.385:0.0,0.0:7.30822e-19,0.0268526,0.973201
-chr1	8723775	.	CACACACACACACA	.	.	.	END=8723788;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.976786:7,7:6-7,6-7:20,12,0,0:6,2|7,18:NULL:198.465:326.675,113.385:0.44763,0.44763:9.9095e-36,0.0232696,0.976773
-chr1	8723801	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=8723818;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999479:9,9:9-9,9-9:15,14,0,0:9,15:NULL:187.994:326.675,113.385:0.0,0.0:3.7835e-27,0.000316983,0.999683
-chr1	8724576	.	AAAGAAAGAAAG	.	.	.	END=8724587;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999755:3,3:3-3,3-3:15,7,0,2:3,15:2,2:134.146:326.675,113.385:0.0,0.0:0.0,9.06099e-05,0.999911
-chr1	8734504	.	ACACACACACAC	.	.	.	END=8734515;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.980354:6,6:5-7,5-7:19,5,0,2:5,2|6,17:4,1|5,1:149.183:326.675,113.385:0.503882,0.503882:8.75392e-34,0.0196928,0.980346
-chr1	8735119	.	CACACACACACACACACACACACACACACA	.	.	.	END=8735148;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.943262:15,15:14-15,14-15:12,4,0,4:14,2|15,10:5,2|10,1|12,1:123.677:326.675,113.385:0.298675,0.298675:5.12276e-12,0.0537033,0.946383
-chr1	8737285	.	AAACAAACAAAC	.	.	.	END=8737296;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.572:326.675,113.385:0.0,0.0:0.0,8.58223e-09,1.0
-chr1	8737336	.	ACAAAACAAAACAAAACAAAACAAAACAAA	.	.	.	END=8737365;RU=acaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993833:6,6:6-6,6-6:10,13,0,5:6,10:3,1|4,1|5,3:191.525:326.675,113.385:0.0,0.0:3.38817e-33,0.00281481,0.997193
-chr1	8737581	.	AAAACAAAACAAAACAAAAC	.	.	.	END=8737600;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995904:4,4:4-4,4-4:11,4,0,3:4,11:3,3:102.332:326.675,113.385:0.0,0.0:8.70255e-37,0.00136317,0.998641
-chr1	8743177	.	TATATATATATATA	.	.	.	END=8743190;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.889317:7,7:6-8,6-8:7,5,0,0:7,7:NULL:73.888:326.675,113.385:0.608246,0.608246:3.74191e-10,0.065115,0.934977
-chr1	8743192	.	TTGTTGTTGTTGTTG	.	.	.	END=8743206;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995999:5,5:5-5,5-5:11,8,0,2:5,11:3,1|4,1:129.239:326.675,113.385:0.0,0.0:1.82559e-33,0.00187478,0.998132
-chr1	8747307	.	CTTTCTTTCTTT	.	.	.	END=8747318;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998932:3,3:3-3,3-3:13,6,0,0:3,13:NULL:103.89:326.675,113.385:0.0,0.0:9.97061e-38,0.00050504,0.999499
-chr1	8747937	.	TTTATTTATTTA	.	.	.	END=8747948;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98465:3,3:3-3,3-3:9,4,0,0:3,9:NULL:73.8153:326.675,113.385:0.0,0.0:7.94114e-30,0.00766915,0.992348
-chr1	8748060	.	TTTTGTTTTGTTTTG	.	.	.	END=8748074;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990939:3,3:3-3,3-3:10,5,0,0:3,10:NULL:87.1438:326.675,113.385:0.0,0.0:2.88402e-32,0.00531553,0.9947
-chr1	8750524	.	TCTCTCTCTCTC	.	.	.	END=8750535;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997357:6,6:6-6,6-6:12,5,0,2:6,12:4,2:114.706:326.675,113.385:0.0,0.0:1.90457e-24,0.00151952,0.998488
-chr1	8750590	.	TCTCTCTCTC	.	.	.	END=8750599;RU=tc;PERIOD=2;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989181:5,5:5-13,5-13:11,5,0,0:5,11:NULL:93.3733:326.675,113.385:3.99824,3.99824:3.62781e-27,0.00379959,0.99621
-chr1	8753159	.	AGAGAGAGAGAG	.	.	.	END=8753170;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999963:6,6:6-6,6-6:17,14,0,3:6,17:4,1|5,2:225.969:326.675,113.385:0.0,0.0:4.18258e-39,1.76549e-05,0.999986
-chr1	8754911	.	TTTGTTTGTTTG	.	.	.	END=8754922;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997164:3,3:3-4,3-4:12,9,0,0:3,12:NULL:132.107:326.675,113.385:0.475866,0.475866:1.13921e-40,0.00179077,0.998216
-chr1	8758313	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=8758332;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999632:5,5:5-5,5-5:14,10,0,3:5,14:3,2|4,1:170.794:326.675,113.385:0.0,0.0:7.5234e-41,0.000212208,0.999789
-chr1	8759459	.	TATTTATTTATT	.	.	.	END=8759470;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999922:3,3:3-3,3-3:17,6,0,0:3,17:NULL:121.223:326.675,113.385:0.0,0.0:0.0,4.54659e-05,0.999956
-chr1	8765668	.	AATAAATAAATA	.	.	.	END=8765679;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959532:3,3:3-3,3-3:8,5,0,0:3,8:NULL:77.3003:326.675,113.385:0.0,0.0:1.84624e-26,0.0212171,0.978826
-chr1	8771953	.	AGGAAAGGAAAGGAA	.	.	.	END=8771967;RU=aggaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999792:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.516:326.675,113.385:0.0,0.0:0.0,0.000158064,0.999843
-chr1	8778970	.	TTTCTTTCTTTC	.	.	.	END=8778981;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:175.96:326.675,113.385:0.0,0.0:0.0,6.06985e-06,0.999994
-chr1	8783282	.	ATATATATATATAT	.	.	.	END=8783295;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.49888:7,7:6-7,6-7:10,3,0,0:6,2|7,8:NULL:75.1751:326.675,113.385:0.486863,0.486863:9.80189e-09,0.497037,0.502977
-chr1	8784610	.	ACACACACACACACACACACACACACACACACACACAC	.	.	.	END=8784647;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.971893:19,19:17-19,17-19:9,6,0,7:19,9:7,1|11,2|13,1|17,2|18,1:148.768:326.675,113.385:0.634591,0.634591:7.52986e-13,0.0110308,0.988993
-chr1	8784672	.	AAAACAAAACAAAAC	.	.	.	END=8784686;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998793:3,3:3-3,3-3:13,9,0,0:3,13:NULL:133.991:326.675,113.385:0.0,0.0:1e-44,0.000765121,0.99924
-chr1	8785066	.	TAAATAAATAAA	.	.	.	END=8785077;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999799:3,3:3-3,3-3:16,6,0,0:3,16:NULL:123.274:326.675,113.385:0.0,0.0:0.0,0.000122937,0.999879
-chr1	8786909	.	CTCTTGCTCTTGCTCTTGCTCTTG	.	.	.	END=8786932;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998131:4,4:4-4,4-4:12,17,0,3:4,12:3,3:221.197:326.675,113.385:0.0,0.0:8.55373e-35,0.00145832,0.998549
-chr1	8790230	.	CTCTTGCTCTTGCTCTTGCTCTTG	.	.	.	END=8790253;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985433:4,4:4-4,4-4:9,11,0,2:4,9:3,2:153.147:326.675,113.385:0.0,0.0:4.64383e-30,0.00909807,0.990925
-chr1	8794964	.	ATATATATATATATATATATATAT	ATATATATATATATATATATAT	.	.	END=8794987;RU=at;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.932931:11,12:11-12,11-12:6,5,0,0:11,2|12,4:NULL:74.3812:326.675,113.385:0.484441,0.21692:0.00011127,0.943244,0.0567284
-chr1	8796394	.	ATTTATTTATTT	.	.	.	END=8796405;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998744:3,3:3-3,3-3:13,7,0,0:3,13:NULL:116.182:326.675,113.385:0.0,0.0:1.53173e-38,0.000632784,0.99937
-chr1	8798684	.	AGCAGCAGCAGC	.	.	.	END=8798695;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:226.317:326.675,113.385:0.0,0.0:0.0,5.43975e-06,0.999995
-chr1	8800250	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	.	END=8800297;RU=agga;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.594842:12,12:12-12,12-12:4,8,0,10:12,4:2,1|4,2|6,1|7,2|8,1|9,2|11,1:162.595:326.675,113.385:0.0990099,0.0990099:1.58453e-08,0.225544,0.774489
-chr1	8800676	.	TAAATAAATAAA	.	.	.	END=8800687;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99217:3,3:3-3,3-3:10,8,0,2:3,10:2,2:128.633:326.675,113.385:0.0,0.0:5.11394e-33,0.00312934,0.996881
-chr1	8800714	.	AACAACAACAAC	.	.	.	END=8800725;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992712:4,4:4-4,4-4:11,10,0,0:4,11:NULL:135.379:326.675,113.385:0.0,0.0:6.64144e-31,0.00496701,0.995047
-chr1	8805447	.	GGGGGAGGGGGAGGGGGA	.	.	.	END=8805464;RU=ggggga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990143:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.811:326.675,113.385:0.0,0.0:1.04539e-30,0.00676799,0.993249
-chr1	8807437	.	TTTGTTTGTTTG	.	.	.	END=8807448;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:195.556:326.675,113.385:0.0,0.0:0.0,1.13934e-06,1.0
-chr1	8810096	.	TAAATAAATAAA	.	.	.	END=8810107;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999928:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.067:326.675,113.385:0.0,0.0:0.0,3.91424e-05,0.999963
-chr1	8810477	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=8810494;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999814:3,3:3-3,3-3:15,12,0,3:3,15:2,3:192.709:326.675,113.385:0.0,0.0:0.0,9.18495e-05,0.99991
-chr1	8814191	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8814208;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966826:9,9:8-10,8-10:17,3,0,5:8,3|9,14:4,1|7,1|8,2|9,1:142.198:326.675,113.385:0.461008,0.461008:3.05001e-29,0.0331402,0.966922
-chr1	8815663	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8815726;RU=tc;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0181341:28,28:28-32,28-32:0,8,0,7:NULL:4,1|8,1|9,1|11,1|21,1|22,1|26,1:128.18:326.675,113.385:1.25387,1.25387:0.387564,0.473392,0.139121
-chr1	8816641	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8816672;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.80832:16,16:15-16,15-16:10,9,0,4:15,2|16,8:8,1|12,1|15,2:161.939:326.675,113.385:0.390807,0.390807:1.74484e-09,0.183516,0.816552
-chr1	8817844	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8817913;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.011417:34,34:9-34,9-34:0,11,0,8:NULL:9,2|11,1|18,1|21,1|23,1|29,1|33,1:161.9:326.675,113.385:9.00396,9.00396:0.497947,0.47067,0.0314397
-chr1	8819083	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8819132;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.153341:26,26:24-26,24-26:2,12,0,10:26,2:5,2|6,2|8,1|10,1|16,1|17,1|19,1|23,1:201.787:326.675,113.385:0.915079,0.915079:0.000331256,0.3795,0.620228
-chr1	8820361	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8820396;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.294315:18,23:18-19,16-23:9,9,0,9:18,7|19,2:5,2|6,1|8,1|9,2|13,1|14,1|23,1:201.422:326.675,113.385:0.236383,2.38098:3.51614e-15,2.22824e-07,1.0
-chr1	8823929	.	TGGGTGGGTGGG	.	.	.	END=8823940;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99987:3,3:3-3,3-3:15,12,0,3:3,15:2,3:186.501:326.675,113.385:0.0,0.0:0.0,6.40528e-05,0.99994
-chr1	8824054	.	ATTTATTTATTT	.	.	.	END=8824065;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,8,0,2:3,30:2,2:203.191:326.675,113.385:0.0,0.0:0.0,2.58817e-09,1.0
-chr1	8827247	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=8827291;RU=ttg;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:15,15:15-15,15-15:19,13,0,15:15,19:3,2|4,1|5,1|6,1|7,2|9,1|10,1|11,1|12,1|13,1|14,3:312.501:326.675,113.385:0.0,0.0:1.25107e-38,7.04996e-06,0.999994
-chr1	8833833	.	ACCACCACCACCACCACC	.	.	.	END=8833850;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:28,11,0,8:6,28:3,1|4,3|5,4:273.788:326.675,113.385:0.0,0.0:0.0,1.24028e-08,1.0
-chr1	8834106	.	AAAGAAAGAAAG	.	.	.	END=8834117;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:202.146:326.675,113.385:0.0,0.0:0.0,3.19142e-06,1.0
-chr1	8835404	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8835449;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.679654:22,23:22-23,23-23:17,12,0,13:22,7|23,10:5,2|6,1|7,2|8,1|9,1|17,2|20,1|21,1|22,2:298.777:326.675,113.385:0.495841,0.0:9.49549e-09,0.679662,0.320347
-chr1	8837723	.	AATAAATAAATAAATA	.	.	.	END=8837738;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999735:4,4:4-4,4-4:15,4,0,2:4,15:2,1|3,1:108.529:326.675,113.385:0.0,0.0:1e-45,0.000120001,0.99988
-chr1	8840838	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	.	END=8840876;RU=ctt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997373:13,13:13-13,13-13:12,17,0,8:13,12:4,1|6,1|8,1|9,3|10,1|11,1:258.066:326.675,113.385:0.0,0.0:6.14404e-33,0.00142455,0.99858
-chr1	8848162	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8848191;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991418:15,15:13-16,13-16:11,4,0,6:15,11:5,1|6,2|10,1|14,2:136.868:326.675,113.385:0.489474,0.489474:2.55922e-15,0.00317791,0.99683
-chr1	8848195	.	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=8848293;RU=gaa;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.322535:32,32:30-34,30-34:2,9,0,12:32,2:4,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|28,1|30,1|31,1|32,1:189.229:326.675,113.385:0.626507,0.626507:0.539029,0.458295,0.00279247
-chr1	8848386	.	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	.	.	.	END=8848480;RU=gggaa;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.460313:19,19:18-19,18-19:3,9,0,13:19,3:3,1|5,1|8,1|10,1|11,1|13,1|15,1|17,1|18,5:193.919:326.675,113.385:0.284901,0.284901:1.42522e-06,0.210658,0.789391
-chr1	8850301	.	CATACATACATA	.	.	.	END=8850312;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,3,0,2:3,20:2,2:124.456:326.675,113.385:0.0,0.0:0.0,3.10488e-06,1.0
-chr1	8851721	.	AGAAAGAAAGAAAGAAAGAAAGAA	.	.	.	END=8851744;RU=agaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995531:6,6:5-6,5-6:11,23,0,5:6,11:2,1|4,1|5,3:285.933:326.675,113.385:0.425627,0.425627:3.18763e-21,0.00288447,0.997124
-chr1	8852685	.	GGGTGGGTGGGT	.	.	.	END=8852696;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.928769:3,3:3-3,3-3:7,21,0,0:3,7:NULL:222.275:326.675,113.385:0.19802,0.19802:3.35873e-21,0.043614,0.956457
-chr1	8856513	.	TATATATATATA	.	.	.	END=8856524;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.891103:6,6:5-6,5-6:14,3,0,0:5,3|6,11:NULL:92.127:326.675,113.385:0.36513,0.36513:2.12696e-13,0.10786,0.892238
-chr1	8857202	.	GAGAGAGAGAGA	.	.	.	END=8857213;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999129:6,6:5-6,5-6:13,8,0,3:6,13:5,3:149.8:326.675,113.385:0.419363,0.419363:1.06978e-35,0.000363674,0.999637
-chr1	8860742	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8860779;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.996848:19,20:18-19,18-20:11,5,0,14:18,2|19,6|20,3:4,1|5,2|6,2|7,1|9,1|10,2|13,2|14,1|20,2:219.945:326.675,113.385:0.323567,0.363786:2.20948e-23,0.000960826,0.999043
-chr1	8863873	.	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	.	.	END=8863991;RU=ctgcctg;PERIOD=7;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.179105:16,16:14-16,14-16:0,18,0,32:NULL:2,1|3,4|4,1|6,3|7,1|8,5|9,2|10,2|11,4|13,4|14,1|15,2|16,2:378.902:326.675,113.385:0.607763,0.607763:0.385714,0.501196,0.113186
-chr1	8865199	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8865252;RU=tc;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.968546:26,27:5-27,5-27:19,8,0,9:25,4|26,6|27,9:5,2|6,1|8,1|12,1|15,1|16,1|22,1|26,1:251.944:326.675,113.385:9.18917,7.11396:2.393e-07,0.974888,0.0251617
-chr1	8865253	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8865286;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.353293:17,18:17-17,17-18:11,8,0,5:17,11:15,4|18,1:170.877:326.675,113.385:0.0,0.537032:1.58965e-25,3.94925e-08,1.0
-chr1	8865886	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8865933;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.590958:24,24:24-25,24-25:16,11,0,12:24,13|25,3:5,1|7,2|12,1|13,3|15,1|17,1|19,1|21,1|23,1:275.553:326.675,113.385:0.481803,0.481803:4.06428e-17,0.000140235,0.999864
-chr1	8866609	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8866646;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.898856:19,20:19-19,19-20:19,17,0,16:18,2|19,17:5,2|6,1|9,1|10,1|11,2|12,2|14,2|15,4|20,1:390.696:326.675,113.385:0.0,0.472558:6.33979e-22,2.9656e-07,1.0
-chr1	8868138	.	CAAACCAAACCAAAC	.	.	.	END=8868152;RU=caaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,22,0,0:3,28:NULL:315.714:326.675,113.385:0.0,0.0:0.0,4.2339e-08,1.0
-chr1	8869124	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8869175;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.029014:23,23:23-26,23-26:0,2,0,0:NULL:NULL:22.634:326.675,113.385:1.2356,1.2356:0.258741,0.506922,0.23435
-chr1	8870489	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8870542;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.229769:27,39:25-27,26-41:5,8,0,13:26,3|27,2:5,2|6,1|11,1|14,1|18,1|19,2|21,1|22,2|23,1|39,1:209.587:326.675,113.385:1.34486,6.22146:1.87855e-07,0.175017,0.825054
-chr1	8870819	.	TTTTATTTTATTTTA	.	.	.	END=8870833;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,7,0,0:3,30:NULL:183.953:326.675,113.385:0.0,0.0:0.0,4.23064e-09,1.0
-chr1	8881143	.	AAATAAATAAAT	.	.	.	END=8881154;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.894:326.675,113.385:0.0,0.0:0.0,6.30973e-07,1.0
-chr1	8891081	.	CATGCATGCATG	.	.	.	END=8891092;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999769:3,3:3-3,3-3:15,6,0,0:3,15:NULL:121.647:326.675,113.385:0.0,0.0:3.8172e-31,0.000124544,0.999879
-chr1	8894445	.	TTTGTTTGTTTG	.	.	.	END=8894456;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:123.879:326.675,113.385:0.0,0.0:0.0,3.92141e-06,0.999995
-chr1	8896564	.	TCTTTCTTTCTT	.	.	.	END=8896575;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,9,0,2:3,26:2,2:200.704:326.675,113.385:0.0,0.0:0.0,3.85101e-08,1.0
-chr1	8896983	.	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTT	.	.	.	END=8897012;RU=tttgtt;PERIOD=6;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999962:5,5:5-5,5-5:17,20,0,6:5,17:2,3|3,1|4,2:291.268:326.675,113.385:0.0,0.0:1e-45,4.48778e-05,0.999956
-chr1	8902045	.	TCTCCTCTCCTCTCCTCTCC	.	.	.	END=8902064;RU=tctcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,6,0,4:4,25:3,4:184.34:326.675,113.385:0.0,0.0:0.0,7.11103e-08,1.0
-chr1	8903368	.	TAAATAAATAAA	.	.	.	END=8903379;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999722:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.598:326.675,113.385:0.0,0.0:0.0,0.000152183,0.999849
-chr1	8905683	.	TCTCTCTCTCTC	.	.	.	END=8905694;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,16,0,0:6,22:NULL:232.951:326.675,113.385:0.0,0.0:0.0,1.45279e-06,1.0
-chr1	8907395	.	CACACACACACA	.	.	.	END=8907406;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995262:6,6:6-6,6-6:11,12,0,0:6,11:NULL:159.469:326.675,113.385:0.0,0.0:9.17521e-26,0.00274876,0.99726
-chr1	8909209	.	TATACATATACATATACATATACATATACATATACATATACATATACA	.	.	.	END=8909256;RU=tataca;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.868755:8,8:8-11,8-11:7,8,0,3:8,7:3,2|6,1:123.592:326.675,113.385:1.47322,1.47322:1.3311e-16,0.0746377,0.925456
-chr1	8909266	.	AGAGAGAGAGAGAG	.	.	.	END=8909279;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.865302:7,7:7-7,7-7:7,9,0,0:7,7:NULL:109.484:326.675,113.385:0.0,0.0:1.3106e-16,0.077319,0.922778
-chr1	8909506	.	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	.	.	.	END=8909589;RU=catcta;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.83448:14,14:14-14,14-14:5,10,0,19:14,5:3,2|5,3|6,1|7,1|8,2|9,1|11,1|12,3|13,5:241.438:326.675,113.385:0.0990099,0.0990099:2.26933e-10,0.0688562,0.931239
-chr1	8912340	.	ATTTATTTATTT	.	.	.	END=8912351;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.168:326.675,113.385:0.0,0.0:0.0,3.28267e-06,1.0
-chr1	8917312	.	GTTTGTTTGTTT	.	.	.	END=8917323;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.076:326.675,113.385:0.0,0.0:0.0,6.01145e-06,0.999995
-chr1	8917711	.	TTTGTTTGTTTGTTTG	.	.	.	END=8917726;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:240.042:326.675,113.385:0.0,0.0:0.0,7.93477e-07,1.0
-chr1	8926905	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	.	END=8926964;RU=tttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.527139:15,15:8-15,8-15:4,7,0,9:15,4:2,1|3,1|4,1|5,1|7,1|11,2|12,1|14,1:152.15:326.675,113.385:3.13625,3.13625:2.44555e-09,0.341895,0.658126
-chr1	8927634	.	CTCTCTCTCTCTCTCT	.	.	.	END=8927649;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:8,8:8-8,8-8:28,18,0,6:7,2|8,26:4,1|6,2|7,3:336.47:326.675,113.385:0.0,0.0:2.082e-42,6.42184e-06,0.999995
-chr1	8928347	.	AAACAAACAAACAAAC	.	.	.	END=8928362;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999279:4,4:4-4,4-4:14,14,0,0:4,14:NULL:181.16:326.675,113.385:0.0,0.0:0.0,0.000534942,0.999469
-chr1	8931732	.	TTTGTTTGTTTGTTTG	.	.	.	END=8931747;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995511:4,4:4-4,4-4:11,3,0,2:4,11:2,1|3,1:84.3862:326.675,113.385:0.0,0.0:3.83811e-36,0.00198111,0.998026
-chr1	8932575	.	TTTATTTATTTATTTA	.	.	.	END=8932590;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99834:4,4:4-4,4-4:13,15,0,0:4,13:NULL:182.651:326.675,113.385:0.0,0.0:2.88158e-36,0.00128161,0.998724
-chr1	8937294	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=8937311;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999731:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.413:326.675,113.385:0.0,0.0:8.13e-43,0.000145271,0.999857
-chr1	8942569	.	TCTTTCTTTCTTTCTT	.	.	.	END=8942584;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99744:4,4:4-4,4-4:12,5,0,0:4,12:NULL:92.7736:326.675,113.385:0.0,0.0:6.66647e-35,0.00157776,0.998428
-chr1	8943948	.	GTTTTTGTTTTTGTTTTT	.	.	.	END=8943965;RU=gttttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998791:3,3:3-3,3-3:13,5,0,0:3,13:NULL:96.9382:326.675,113.385:0.0,0.0:5.3e-44,0.000689368,0.999316
-chr1	8944123	.	GTTGGTTGGTTGGTTGGTTG	.	.	.	END=8944142;RU=gttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,8,0,7:5,25:3,2|4,5:221.734:326.675,113.385:0.0,0.0:0.0,7.72888e-08,1.0
-chr1	8945703	.	ACACACACACACACAC	.	.	.	END=8945718;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99982:8,8:8-8,8-8:16,5,0,6:8,16:5,1|6,3|7,2:154.178:326.675,113.385:0.0,0.0:2.7511e-30,5.01359e-05,0.999949
-chr1	8946213	.	ACACACACACACACACACACAC	.	.	.	END=8946234;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993926:11,11:10-11,10-11:20,6,0,5:10,2|11,18:4,1|5,1|9,1|10,2:180.137:326.675,113.385:0.398753,0.398753:2.41738e-26,0.00609946,0.993917
-chr1	8949155	.	ATTTATTTATTT	.	.	.	END=8949166;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999001:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.5095:326.675,113.385:0.0,0.0:2.07056e-40,0.000524939,0.999477
-chr1	8954485	.	AATAAATAAATAAATA	.	.	.	END=8954500;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995693:4,4:4-4,4-4:11,8,0,2:4,11:3,2:132.213:326.675,113.385:0.0,0.0:2.8702e-33,0.00223349,0.997775
-chr1	8957579	.	AAACAAACAAAC	.	.	.	END=8957590;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999946:3,3:3-3,3-3:17,6,0,2:3,17:2,2:133.668:326.675,113.385:0.0,0.0:0.0,2.2052e-05,0.999979
-chr1	8962592	.	TTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=8962619;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991848:7,7:7-8,7-8:10,7,0,4:7,10:5,2|6,2:139.12:326.675,113.385:0.452422,0.452422:1.87179e-23,0.0030756,0.996935
-chr1	8966427	.	AATGAATGAATGAATG	.	.	.	END=8966442;RU=aatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999909:4,4:4-4,4-4:16,8,0,4:4,16:3,4:164.559:326.675,113.385:0.0,0.0:0.0,3.99346e-05,0.999963
-chr1	8967541	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=8967565;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991041:5,5:5-5,5-5:10,6,0,2:5,10:4,2:114.147:326.675,113.385:0.0,0.0:2.27669e-34,0.00402819,0.995983
-chr1	8969212	.	CTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=8969235;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.660708:12,12:12-13,12-13:5,1,0,4:12,5:6,1|7,1|9,1|10,1:61.3337:326.675,113.385:0.345543,0.345543:4.09213e-05,0.150859,0.849184
-chr1	8969424	.	TATATATATATATATATATATATATATATATATATATATA	.	.	.	END=8969463;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.174936:20,20:18-20,18-20:2,2,0,0:20,2:NULL:27.3013:326.675,113.385:0.744881,0.744881:0.00757335,0.50548,0.487012
-chr1	8969463	.	AGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=8969486;RU=ag;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.922272:12,12:12-12,12-12:7,4,0,3:12,7:7,1|10,1|11,1:88.785:326.675,113.385:0.0,0.0:6.57346e-13,0.027556,0.972496
-chr1	8974355	.	CATCATCATCAT	.	.	.	END=8974366;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,23,0,0:4,24:NULL:300.522:326.675,113.385:0.0,0.0:0.0,8.12535e-07,1.0
-chr1	8976339	.	TTATTATTATTA	.	.	.	END=8976350;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:4,4:4-5,4-5:20,14,0,0:4,20:NULL:213.92:326.675,113.385:0.431574,0.431574:0.0,1.74031e-05,0.999986
-chr1	8976507	.	CCCACCCACCCA	.	.	.	END=8976518;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:37,21,0,2:3,37:2,2:353.756:326.675,113.385:0.0,0.0:0.0,5.56012e-11,1.0
-chr1	8977413	.	AGGAGGAGGAGG	.	.	.	END=8977424;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:4,4:4-4,4-4:18,18,0,2:4,18:3,2:251.578:326.675,113.385:0.0,0.0:0.0,1.51235e-05,0.999986
-chr1	8978639	.	AAAATTAAAATTAAAATT	.	.	.	END=8978656;RU=aaaatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999948:3,3:3-3,3-3:17,12,0,0:3,17:NULL:178.649:326.675,113.385:0.0,0.0:0.0,4.79368e-05,0.999955
-chr1	8992158	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=8992189;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997771:8,8:8-8,8-8:12,21,0,8:8,12:3,1|4,1|6,4|7,2:299.467:326.675,113.385:0.0,0.0:4.40686e-32,0.00147235,0.998534
-chr1	8996946	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8996997;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/2:0.250404:25,28:25-28,25-28:2,5,0,9:25,2:9,1|15,3|16,1|17,1|19,1|25,1|28,1:129.107:326.675,113.385:0.807523,0.960549:6.73269e-08,0.946104,0.053981
-chr1	8997017	.	TTTCTTTCTTTC	.	.	.	END=8997028;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999859:3,3:3-3,3-3:16,2,0,0:3,16:NULL:80.5162:326.675,113.385:0.0,0.0:0.0,6.20326e-05,0.999941
-chr1	9000049	.	ATGATGATGATG	.	.	.	END=9000060;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,15,0,2:4,24:3,2:250.432:326.675,113.385:0.0,0.0:0.0,4.66483e-07,1.0
-chr1	9000143	.	AAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=9000170;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:24,13,0,11:7,24:2,2|4,3|5,2|6,4:298.135:326.675,113.385:0.0,0.0:0.0,1.88854e-07,1.0
-chr1	9003159	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=9003188;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9442:15,15:14-15,14-15:8,5,0,5:15,8:5,1|9,2|10,1|11,1:120.392:326.675,113.385:0.195027,0.195027:3.1254e-15,0.0284693,0.971582
-chr1	9003186	.	TCTATCTATCTATCTA	.	.	.	END=9003201;RU=tcta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986866:4,4:4-4,4-4:10,3,0,0:4,10:NULL:68.9658:326.675,113.385:0.0,0.0:3.03064e-13,0.00828464,0.991734
-chr1	9007831	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9007856;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.858364:13,13:12-14,12-14:21,8,0,4:12,5|13,14|14,2:9,1|11,2|12,1:214.993:326.675,113.385:0.560784,0.560784:4.82571e-17,0.137341,0.862749
-chr1	9008428	.	TATTTATTTATT	.	.	.	END=9008439;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:193.865:326.675,113.385:0.0,0.0:0.0,2.09592e-07,1.0
-chr1	9010782	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9010839;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0249467:22,22:22-25,22-25:0,3,0,2:NULL:5,1|19,1:40.9669:326.675,113.385:1.44541,1.44541:1.0,0.0,0.0
-chr1	9010840	.	ACACACACACACACAC	.	.	.	END=9010855;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.392876:8,8:8-8,8-8:3,2,0,0:8,3:NULL:29.0822:326.675,113.385:0.0,0.0:3.84704e-09,0.321237,0.678776
-chr1	9012172	.	TATATATATATATATATATA	.	.	.	END=9012191;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.886758:10,10:9-10,9-10:7,6,0,0:10,7:NULL:84.391:326.675,113.385:0.398507,0.398507:3.0459e-08,0.0742848,0.925809
-chr1	9015094	.	AAAGAAAGAAAG	.	.	.	END=9015105;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99985:3,3:3-3,3-3:16,19,0,0:3,16:NULL:229.756:326.675,113.385:0.0,0.0:0.0,0.000113049,0.999888
-chr1	9015582	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9015617;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.840554:18,18:11-18,11-18:10,15,0,15:17,2|18,8:5,3|8,1|10,1|12,2|13,2|15,3|16,1|17,1|18,1:307.155:326.675,113.385:2.7477,2.7477:7.32886e-17,0.147725,0.852355
-chr1	9020212	.	GAATGAATGAATGAATGAATGAAT	.	.	.	END=9020235;RU=gaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999425:6,6:6-6,6-6:15,8,0,0:6,15:NULL:135.366:326.675,113.385:0.0,0.0:1.88457e-16,0.000431303,0.999569
-chr1	9021852	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9021905;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.0477433:26,26:26-27,26-27:0,7,0,11:NULL:8,1|10,1|12,1|13,1|14,1|15,1|16,1|24,2|26,2:156.553:326.675,113.385:0.534653,0.534653:0.0916676,0.439076,0.469425
-chr1	9022665	.	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=9022689;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,6,0,4:5,26:2,1|3,2|4,1:189.236:326.675,113.385:0.0,0.0:0.0,6.84067e-08,1.0
-chr1	9025967	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9026010;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.84528:22,22:8-23,8-23:7,8,0,11:22,7:5,1|7,1|8,1|9,1|11,1|13,1|14,1|18,2|19,2:191.718:326.675,113.385:4.31912,4.31912:4.1625e-08,0.0753746,0.924719
-chr1	9027019	.	TTTATTTATTTA	.	.	.	END=9027030;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.985866:3,3:3-3,3-3:9,6,0,2:3,9:2,2:101.237:326.675,113.385:0.0,0.0:1.1158e-20,0.00535034,0.994663
-chr1	9029369	.	ATATATATATAT	.	.	.	END=9029380;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994092:6,6:4-7,4-7:19,10,0,0:6,17|7,2:NULL:171.876:326.675,113.385:0.397522,0.397522:1.02527e-22,4.64167e-05,0.999956
-chr1	9029380	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9029417;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977209:19,19:17-20,17-20:18,16,0,11:19,16|20,2:5,2|9,2|10,1|13,1|16,1|17,1|18,2|19,1:315.247:326.675,113.385:0.483833,0.483833:1.89571e-33,1.92268e-05,0.99998
-chr1	9029844	.	CAACAACAACAACAA	.	.	.	END=9029858;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,13,0,4:5,23:3,1|4,3:240.983:326.675,113.385:0.0,0.0:0.0,3.9763e-07,1.0
-chr1	9036620	.	TTGCTTGCTTGC	.	.	.	END=9036631;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:3,3:3-3,3-3:18,11,0,2:3,18:2,2:189.103:326.675,113.385:0.0,0.0:0.0,1.8714e-05,0.999985
-chr1	9037227	.	TTGTTTGTTTGT	.	.	.	END=9037238;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999784:3,3:3-3,3-3:15,8,0,2:3,15:2,2:141.515:326.675,113.385:0.0,0.0:0.0,9.43857e-05,0.999909
-chr1	9044406	.	TATATATATATA	.	.	.	END=9044417;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.957473:6,6:6-6,6-6:9,15,0,0:6,9:NULL:171.372:326.675,113.385:0.0,0.0:1.20608e-19,0.0299865,0.970067
-chr1	9044826	.	CTTTTCTTTTCTTTTCTTTT	.	.	.	END=9044845;RU=ctttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,9,0,2:4,19:3,2:174.322:326.675,113.385:0.0,0.0:0.0,1.1877e-05,0.999987
-chr1	9051415	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9051434;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:30,10,0,0:5,30:NULL:213.903:326.675,113.385:0.0,0.0:0.0,7.71664e-09,1.0
-chr1	9052040	.	ATATATATATATAT	.	.	.	END=9052053;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.974584:7,7:7-7,7-7:9,5,0,0:7,9:NULL:79.1573:326.675,113.385:0.0,0.0:2.30478e-15,0.0141506,0.985881
-chr1	9054350	.	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	.	.	.	END=9054388;RU=gtg;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.97978:13,13:12-13,12-13:17,17,0,9:12,2|13,15:3,2|4,2|5,1|6,1|8,1|9,2:304.92:326.675,113.385:0.334882,0.334882:9.55963e-30,0.0202098,0.979833
-chr1	9055550	.	GAGAGAGAGAGA	.	.	.	END=9055561;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999908:6,6:6-6,6-6:17,6,0,0:6,17:NULL:124.175:326.675,113.385:0.0,0.0:2.18165e-37,5.48361e-05,0.999948
-chr1	9057035	.	ACACACACACACACACACACACACACACACACACAC	.	.	.	END=9057070;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.897055:18,18:17-18,17-18:12,10,0,14:17,3|18,9:5,2|7,1|8,1|9,1|10,2|11,1|13,2|14,1|15,1|16,1|17,1:260.454:326.675,113.385:0.345543,0.345543:3.99221e-10,0.0980294,0.902074
-chr1	9065820	.	ACCCACCCACCC	.	.	.	END=9065831;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977326:3,3:3-3,3-3:9,21,0,0:3,9:NULL:225.439:326.675,113.385:0.0,0.0:8.67199e-27,0.0162112,0.983822
-chr1	9066850	.	TTGTTGTTGTTG	.	.	.	END=9066861;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99999:4,4:4-4,4-4:18,13,0,3:4,18:3,3:216.888:326.675,113.385:0.0,0.0:0.0,1.61757e-05,0.999986
-chr1	9077038	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=9077077;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.992087:19,20:19-22,20-20:15,9,0,16:19,7|20,8:4,2|5,2|10,2|11,1|13,1|14,2|16,2|17,1|18,2|19,1:283.071:326.675,113.385:0.914864,0.19802:3.63782e-08,0.992064,0.0079529
-chr1	9080272	.	AAAGGAAAAGGAAAAGGA	.	.	.	END=9080289;RU=aaagga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:167.245:326.675,113.385:0.0,0.0:0.0,1.10308e-07,1.0
-chr1	9093163	.	CAACAACAACAA	.	.	.	END=9093174;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,7,0,2:4,23:3,2:169.731:326.675,113.385:0.0,0.0:0.0,4.45989e-07,1.0
-chr1	9101067	.	TAAATAAATAAA	.	.	.	END=9101078;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:202.305:326.675,113.385:0.0,0.0:0.0,1.23536e-05,0.999987
-chr1	9101909	.	GATGGATGGATGGATGGATGGATGGATGGATGGATGGATG	.	.	.	END=9101948;RU=gatg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999347:10,10:6-10,6-10:14,12,0,10:10,14:4,3|5,2|6,1|8,2|9,2:243.867:326.675,113.385:1.80969,1.80969:3.52163e-38,0.00031278,0.999689
-chr1	9101975	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	.	END=9102022;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999885:12,12:12-12,12-12:17,13,0,12:12,17:2,1|3,1|4,2|5,1|6,1|7,2|8,2|11,2:282.169:326.675,113.385:0.139319,0.139319:1.82656e-35,6.6536e-05,0.999934
-chr1	9103931	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9103958;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9842:14,14:12-14,12-14:10,10,0,12:14,10:4,1|5,4|6,4|9,1|11,1|13,1:235.664:326.675,113.385:0.765392,0.765392:4.05923e-13,0.0066438,0.99337
-chr1	9104117	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=9104156;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:8,8:8-8,8-8:17,14,0,6:8,17:3,3|4,2|6,1:241.36:326.675,113.385:0.0,0.0:0.0,6.51563e-05,0.999934
-chr1	9108162	.	AATCAATCAATCAATC	.	.	.	END=9108177;RU=aatc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,14,0,5:4,22:2,1|3,4:248.72:326.675,113.385:0.0,0.0:0.0,9.11744e-07,1.0
-chr1	9118041	.	TTTATTTATTTA	.	.	.	END=9118052;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,2,0,2:3,19:2,2:106.128:326.675,113.385:0.0,0.0:0.0,5.02187e-06,0.999995
-chr1	9118141	.	CCCACCCACCCACCCACCCACCCA	.	.	.	END=9118164;RU=ccca;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.969243:6,6:6-6,6-6:8,4,0,7:6,8:2,1|3,3|5,3:117.826:326.675,113.385:0.0,0.0:7.17771e-23,0.0105606,0.989462
-chr1	9127223	.	TATATATATATATATA	.	.	.	END=9127238;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.66523:8,8:8-8,8-8:5,17,0,0:8,5:NULL:181.379:326.675,113.385:0.0,0.0:3.98815e-07,0.190437,0.809619
-chr1	9130256	.	CATCATCATCATCAT	.	.	.	END=9130270;RU=cat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:25,14,0,4:5,25:3,1|4,3:257.681:326.675,113.385:0.0,0.0:0.0,6.90025e-08,1.0
-chr1	9131824	.	TAAATAAATAAA	.	.	.	END=9131835;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.923:326.675,113.385:0.0,0.0:0.0,3.12728e-06,1.0
-chr1	9133465	.	AAGCAAGCAAGC	.	.	.	END=9133476;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999907:3,3:3-3,3-3:17,15,0,0:3,17:NULL:200.299:326.675,113.385:0.0,0.0:0.0,6.32466e-05,0.99994
-chr1	9142553	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=9142586;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.325667:17,17:16-20,16-20:25,6,0,8:16,6|17,19:5,1|6,1|7,1|10,1|11,1|12,1|15,1|20,1:259.707:326.675,113.385:1.49914,1.49914:9.32892e-22,0.0031623,0.996845
-chr1	9143268	.	AATAAATAAATA	.	.	.	END=9143279;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,17,0,4:3,19:2,4:255.414:326.675,113.385:0.0,0.0:0.0,6.32514e-06,0.999994
-chr1	9154316	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9154355;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.272305:20,37:20-20,19-39:15,8,0,11:19,2|20,13:7,1|10,2|12,2|14,1|15,1|17,1|19,2|36,1:242.669:326.675,113.385:0.0990099,8.55464:2.43813e-16,1.05788e-05,0.999993
-chr1	9155619	.	ATAAATAAATAA	.	.	.	END=9155630;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:138.642:326.675,113.385:0.0,0.0:0.0,4.30834e-06,0.999995
-chr1	9156170	.	TTTGTTTGTTTG	.	.	.	END=9156181;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:175.6:326.675,113.385:0.0,0.0:0.0,4.95853e-06,0.999995
-chr1	9156695	.	GATGATGATGATGATGAT	.	.	.	END=9156712;RU=gat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999722:6,6:6-6,6-6:15,16,0,5:6,15:3,1|4,2|5,2:250.053:326.675,113.385:0.0,0.0:4.94222e-37,0.000153961,0.999849
-chr1	9157471	.	TGGTTGGTTGGTTGGTTGGTTGGT	.	.	.	END=9157494;RU=tggt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999594:6,6:5-6,5-6:14,19,0,7:6,14:3,1|4,5|5,1:286.031:326.675,113.385:0.334882,0.334882:0.0,0.000298026,0.999705
-chr1	9158960	.	AACAACAACAACAAC	.	.	.	END=9158974;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:19,6,0,2:5,19:4,2:146.829:326.675,113.385:0.0,0.0:0.0,7.46421e-06,0.999994
-chr1	9164239	.	CAACAACAACAA	.	.	.	END=9164250;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:226.222:326.675,113.385:0.0,0.0:0.0,5.94517e-07,1.0
-chr1	9167899	.	AACAAAAACAAAAACAAA	.	.	.	END=9167916;RU=aacaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997682:3,3:3-3,3-3:12,6,0,0:3,12:NULL:107.052:326.675,113.385:0.0,0.0:4.81654e-40,0.00123496,0.99877
-chr1	9168809	.	TGGTGGTGGTGG	.	.	.	END=9168820;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,16,0,2:4,21:3,2:240.021:326.675,113.385:0.0,0.0:0.0,1.95118e-06,1.0
-chr1	9174269	.	AAAATAAAATAAAAT	.	.	.	END=9174283;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999924:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.148:326.675,113.385:0.0,0.0:0.0,4.24173e-05,0.999957
-chr1	9185149	.	AAATAAATAAAT	.	.	.	END=9185160;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:200.239:326.675,113.385:0.0,0.0:0.0,3.84078e-08,1.0
-chr1	9190774	.	TGTTTGTTTGTT	.	.	.	END=9190785;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999996:3,3:3-3,3-3:18,7,0,3:3,18:2,3:155.211:326.675,113.385:0.0,0.0:0.0,1.06511e-05,0.999993
-chr1	9192850	.	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	.	.	END=9192944;RU=aaagg;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.634562:17,17:9-17,9-17:4,14,0,17:17,4:2,1|5,1|6,2|8,1|9,2|11,1|13,3|14,1|15,3|16,2:270.043:326.675,113.385:3.99824,3.99824:0.88729,0.11281,2.86131e-10
-chr1	9198920	.	ATCCATCCATCC	.	.	.	END=9198931;RU=atcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:247.93:326.675,113.385:0.0,0.0:0.0,1.34858e-07,1.0
-chr1	9200129	.	TTTATTTATTTA	.	.	.	END=9200140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:36,6,0,2:3,36:2,2:212.001:326.675,113.385:0.0,0.0:0.0,4.11194e-11,1.0
-chr1	9201395	.	TATATATATATATATATATATATATATATATATATATATA	.	.	.	END=9201434;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.134691:20,20:19-22,19-22:2,4,0,0:20,2:NULL:51.6454:326.675,113.385:0.765776,0.765776:0.00662868,0.410622,0.58284
-chr1	9203282	.	AGTCAGTCAGTC	.	.	.	END=9203293;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,15,0,5:3,20:2,5:257.356:326.675,113.385:0.0,0.0:0.0,3.54959e-06,1.0
-chr1	9204564	.	TCATCATCATCA	.	.	.	END=9204575;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999999:4,4:4-4,4-4:18,8,0,5:4,18:3,5:181.185:326.675,113.385:0.0,0.0:0.0,8.05792e-06,0.999994
-chr1	9211529	.	CAAAACAAAACAAAA	.	.	.	END=9211543;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999935:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.809:326.675,113.385:0.0,0.0:0.0,4.89388e-05,0.999955
-chr1	9211779	.	ACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9211816;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.814705:19,19:18-20,18-20:6,12,0,9:19,6:6,1|7,2|14,1|15,1|16,2|18,2:206.507:326.675,113.385:0.55233,0.55233:1.1296e-08,0.0586354,0.941447
-chr1	9216945	.	GAGGGAGGGAGG	.	.	.	END=9216956;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:193.378:326.675,113.385:0.0,0.0:0.0,3.34687e-06,1.0
-chr1	9218068	.	AATTAATTAATT	.	.	.	END=9218079;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999921:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.889:326.675,113.385:0.0,0.0:0.0,4.7444e-05,0.999955
-chr1	9225255	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	.	END=9225306;RU=gaaa;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.838936:13,13:5-13,5-13:6,14,0,12:13,6:2,1|3,1|4,2|6,1|8,1|9,1|10,3|11,1|12,1:248.732:326.675,113.385:4.05346,4.05346:4.40474e-13,0.112307,0.88779
-chr1	9226135	.	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9226188;RU=ata;PERIOD=3;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.990369:17,18:16-18,16-18:7,5,0,9:17,3|18,4:4,1|5,1|7,3|8,1|9,1|14,1|16,1:147.675:326.675,113.385:0.480988,0.363786:6.80332e-05,0.991309,0.00864358
-chr1	9227593	.	TGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9227613;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996976:7,7:6-7,6-7:12,3,0,2:7,12:5,1|6,1:91.0383:326.675,113.385:0.236383,0.236383:7.79232e-22,0.00126966,0.998733
-chr1	9227617	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=9227655;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.945038:13,13:12-13,12-13:8,7,0,8:13,8:3,3|5,1|6,2|7,1|11,1:156.105:326.675,113.385:0.298675,0.298675:1.16214e-12,0.0303655,0.969693
-chr1	9229745	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9229764;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,11,0,3:5,21:3,1|4,2:208.109:326.675,113.385:0.0,0.0:0.0,2.10188e-06,1.0
-chr1	9235751	.	TCTGATGTCTGTGTTCTGATGTCTGTGTTCTGATGTCTGTGT	.	.	.	END=9235792;RU=tctgatgtctgtgt;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.801702:3,3:1-3,1-3:8,18,0,0:3,8:NULL:202.589:326.675,113.385:0.569802,0.569802:1.96275e-09,0.194535,0.805516
-chr1	9247060	.	GGGTGGGTGGGT	.	.	.	END=9247071;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.959299:3,3:3-3,3-3:8,15,0,0:3,8:NULL:165.037:326.675,113.385:0.0,0.0:1.89467e-24,0.0252493,0.9748
-chr1	9251161	.	AAATAAATAAAT	.	.	.	END=9251172;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999524:3,3:3-3,3-3:14,12,0,0:3,14:NULL:160.371:326.675,113.385:0.0,0.0:1e-45,0.000271586,0.999729
-chr1	9252401	.	AGAGAGAGAGAG	.	.	.	END=9252412;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,13,0,0:6,24:NULL:213.251:326.675,113.385:0.0,0.0:0.0,5.19551e-07,1.0
-chr1	9253812	.	TAAATAAATAAA	.	.	.	END=9253823;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,4,0,0:3,24:NULL:130.617:326.675,113.385:0.0,0.0:0.0,2.63531e-07,1.0
-chr1	9257431	.	AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAG	.	.	.	END=9257472;RU=agacag;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999974:7,7:7-7,7-7:18,16,0,10:7,18:4,6|6,4:297.01:326.675,113.385:0.0,0.0:0.0,2.37702e-05,0.999979
-chr1	9258341	.	CTTCCTTCCTTCCTTC	.	.	.	END=9258356;RU=cttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,22,0,0:4,25:NULL:303.27:326.675,113.385:0.0,0.0:0.0,5.21673e-07,1.0
-chr1	9260912	.	AAGAAAAGAAAAGAA	.	.	.	END=9260926;RU=aagaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,4,0,0:3,25:NULL:137.727:326.675,113.385:0.0,0.0:0.0,1.41967e-07,1.0
-chr1	9273522	.	TTGATTGATTGATTGATTGATTGATTGA	.	.	.	END=9273549;RU=ttga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:34,21,0,7:7,34:2,2|3,3|5,1|6,1:399.62:326.675,113.385:0.0,0.0:0.0,1.36727e-09,1.0
-chr1	9274125	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9274170;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.956737:22,23:19-23,23-23:15,14,0,14:21,2|22,5|23,8:5,1|8,2|9,2|10,1|12,1|13,1|16,5|21,1:320.63:326.675,113.385:0.899847,0.39604:5.11288e-07,0.96099,0.0390799
-chr1	9277902	.	ATATATATATATATAT	.	.	.	END=9277917;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999429:8,8:8-8,8-8:15,5,0,0:8,15:NULL:105.87:326.675,113.385:0.0,0.0:8.80438e-21,0.000358104,0.999644
-chr1	9279853	.	ATACATACATACATAC	.	.	.	END=9279868;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,12,0,4:4,22:2,2|3,2:224.55:326.675,113.385:0.0,0.0:0.0,8.97549e-07,1.0
-chr1	9281951	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9281994;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998108:22,22:22-22,22-22:14,11,0,18:22,14:6,1|8,1|9,3|11,2|13,1|14,1|15,2|18,1|19,2|20,2|21,2:309.278:326.675,113.385:0.0,0.0:1.38778e-17,0.000334466,0.999667
-chr1	9282129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9282164;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989568:18,18:17-18,17-18:19,12,0,8:17,4|18,15:4,1|6,1|9,1|10,1|14,1|16,1|17,1|18,1:261.136:326.675,113.385:0.290354,0.290354:1.77746e-23,0.0103277,0.989694
-chr1	9285357	.	TTTATTTATTTA	.	.	.	END=9285368;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.413:326.675,113.385:0.0,0.0:0.0,4.26591e-06,0.999995
-chr1	9286427	.	TTTTATTTTATTTTA	.	.	.	END=9286441;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989896:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.98:326.675,113.385:0.0,0.0:1.23609e-32,0.00643952,0.993578
-chr1	9289377	.	TATTTATTTATTTATTTATTTATT	.	.	.	END=9289400;RU=tatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997387:6,6:6-6,6-6:12,4,0,4:6,12:3,2|4,1|5,1:114.495:326.675,113.385:0.0,0.0:1.98832e-30,0.00113359,0.998869
-chr1	9290815	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9290852;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.655712:19,19:11-20,11-20:5,9,0,8:19,5:5,2|7,1|12,1|14,1|15,1|18,2:166.296:326.675,113.385:3.94512,3.94512:1.10631e-06,0.124407,0.875694
-chr1	9296627	.	ATTAATTAATTA	.	.	.	END=9296638;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,19,0,3:3,21:2,3:278.445:326.675,113.385:0.0,0.0:0.0,1.42207e-06,1.0
-chr1	9296985	.	AAAGAAAGAAAG	.	.	.	END=9296996;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:190.06:326.675,113.385:0.0,0.0:0.0,6.452e-07,1.0
-chr1	9301041	.	TAAATAAATAAA	.	.	.	END=9301052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999938:3,3:3-3,3-3:17,9,0,2:3,17:2,2:162.806:326.675,113.385:0.0,0.0:0.0,2.85568e-05,0.999972
-chr1	9302120	.	CACACACACACACACACACACACACACACACACACACACA	.	.	.	END=9302159;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990551:20,20:19-20,19-20:14,18,0,15:19,2|20,12:8,2|10,1|12,2|14,1|15,1|16,4|18,2|19,1|20,1:349.293:326.675,113.385:0.390054,0.390054:4.34398e-19,0.00830726,0.991711
-chr1	9302309	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9302354;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.303115:23,38:23-23,2-39:13,15,0,18:21,2|23,9|24,2:6,1|7,1|8,1|9,1|10,1|12,2|14,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|32,1|38,1:361.606:326.675,113.385:0.243733,12.4842:8.54821e-26,9.88519e-09,1.0
-chr1	9307495	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=9307558;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.997979:15,15:14-15,14-15:13,9,0,13:15,13:5,1|7,1|8,3|9,3|10,2|13,2|14,1:237.268:326.675,113.385:0.253975,0.253975:0.998922,0.00108148,1.56142e-16
-chr1	9310514	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9310563;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.298027:25,35:24-25,24-35:8,11,0,12:24,2|25,6:5,1|9,2|10,1|11,1|12,1|13,1|15,1|20,1|23,1|24,1|34,1:247.892:326.675,113.385:0.169767,4.95744:5.61813e-11,1.06178e-05,0.999993
-chr1	9314806	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9314831;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.856598:13,14:13-13,13-14:22,15,0,10:12,3|13,19:4,1|5,2|6,1|8,1|9,1|11,2|12,1|14,1:329.622:326.675,113.385:0.0,0.515422:7.72604e-23,7.13848e-06,0.999994
-chr1	9318491	.	TATATATATATATA	.	.	.	END=9318504;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998886:7,7:6-7,6-7:14,5,0,0:7,14:NULL:101.696:326.675,113.385:0.323567,0.323567:2.86529e-18,0.000686551,0.999317
-chr1	9324727	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=9324744;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996535:3,3:3-3,3-3:11,5,0,2:3,11:2,2:100.743:326.675,113.385:0.0,0.0:3.86184e-38,0.00153338,0.998473
-chr1	9326142	.	TCCCTCCCTCCC	.	.	.	END=9326153;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999349:3,3:3-3,3-3:14,20,0,0:3,14:NULL:244.48:326.675,113.385:0.0,0.0:0.0,0.000523905,0.999477
-chr1	9328079	.	AAACAAACAAAC	.	.	.	END=9328090;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:44,21,0,2:3,44:2,2:371.366:326.675,113.385:0.0,0.0:0.0,1.8272e-13,1.0
-chr1	9332135	.	TTTGTTTGTTTGTTTG	.	.	.	END=9332150;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99967:4,4:4-4,4-4:15,12,0,4:4,15:3,4:197.49:326.675,113.385:0.0,0.0:0.0,0.00013273,0.999871
-chr1	9335058	.	TTTTGTTTTGTTTTG	.	.	.	END=9335072;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:145.745:326.675,113.385:0.0,0.0:0.0,6.17845e-07,1.0
-chr1	9336951	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9336970;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.978285:4,4:3-4,3-4:9,12,0,4:4,9:3,4:176.105:326.675,113.385:0.497026,0.497026:4.14237e-29,0.0118562,0.988168
-chr1	9340284	.	TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC	.	.	.	END=9340316;RU=tgc;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992223:11,11:11-11,11-11:10,9,0,8:11,10:3,1|4,2|7,1|9,1|10,3:192.427:326.675,113.385:0.0,0.0:2.04128e-27,0.00258091,0.997427
-chr1	9346828	.	TCATCATCATCA	.	.	.	END=9346839;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:257.942:326.675,113.385:0.0,0.0:0.0,6.09121e-07,1.0
-chr1	9348812	.	TTTGTTTTGTTTTGT	.	.	.	END=9348826;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999229:3,3:3-3,3-3:14,9,0,0:3,14:NULL:141.122:326.675,113.385:0.0,0.0:0.0,0.000509649,0.999492
-chr1	9350228	.	ACAGCGACAGCGACAGCG	.	.	.	END=9350245;RU=acagcg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:276.894:326.675,113.385:0.0,0.0:0.0,2.46273e-07,1.0
-chr1	9350646	.	TTTGTTTGTTTG	.	.	.	END=9350657;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999998:3,3:3-3,3-3:18,9,0,2:3,18:2,2:163.919:326.675,113.385:0.0,0.0:0.0,9.79155e-06,0.999993
-chr1	9352617	.	TTTGTTTGTTTG	.	.	.	END=9352628;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:39,15,0,0:3,39:NULL:292.504:326.675,113.385:0.0,0.0:0.0,1.07657e-11,1.0
-chr1	9360153	.	TTGTTTGTTTGT	.	.	.	END=9360164;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:198.994:326.675,113.385:0.0,0.0:0.0,5.31601e-07,1.0
-chr1	9366180	.	TCCCTCCCTCCCTCCC	.	.	.	END=9366195;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,4,0,0:4,21:NULL:122.492:326.675,113.385:0.0,0.0:0.0,3.79849e-06,1.0
-chr1	9384508	.	TGTGTGTGTGTG	.	.	.	END=9384519;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.628284:6,6:5-6,5-6:20,6,0,0:5,4|6,16:NULL:150.794:326.675,113.385:0.44763,0.44763:7.92581e-13,0.371769,0.62828
-chr1	9384520	.	TATATATATATATATATA	.	.	.	END=9384537;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.815459:9,9:8-9,8-9:16,6,0,0:8,3|9,13:NULL:131.98:326.675,113.385:0.425627,0.425627:3.99286e-13,0.184457,0.815606
-chr1	9392580	.	CACACACACACACACA	.	.	.	END=9392595;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:32,12,0,3:8,32:5,2|6,1:259.698:326.675,113.385:0.0,0.0:0.0,1.69574e-09,1.0
-chr1	9394954	.	TTTCTTTTCTTTTCT	.	.	.	END=9394968;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999975:3,3:3-3,3-3:18,12,0,0:3,18:NULL:178.442:326.675,113.385:0.0,0.0:0.0,3.36197e-05,0.99997
-chr1	9397849	.	TCTCTCTCTCTC	.	.	.	END=9397860;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,15,0,0:6,24:NULL:235.651:326.675,113.385:0.0990099,0.0990099:0.0,9.29089e-07,1.0
-chr1	9400767	.	GAGGGAGGGAGG	.	.	.	END=9400778;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,15,0,2:3,21:2,2:237.819:326.675,113.385:0.0,0.0:0.0,1.35646e-06,1.0
-chr1	9407672	.	ATATATATATATATAT	.	.	.	END=9407687;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986192:8,8:8-9,8-9:10,8,0,0:8,10:NULL:115.125:326.675,113.385:0.345543,0.345543:1.81266e-16,0.00695297,0.993062
-chr1	9413992	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9414011;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999055:5,5:5-5,5-5:13,16,0,7:5,13:2,1|3,3|4,3:248.56:326.675,113.385:0.0,0.0:5.94545e-39,0.000475321,0.999529
-chr1	9418611	.	TTCTTTCTTTCT	.	.	.	END=9418622;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,11,0,0:3,26:NULL:199.853:326.675,113.385:0.0,0.0:0.0,9.92493e-08,1.0
-chr1	9420278	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=9420321;RU=tgtt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:11,11:11-15,11-15:29,15,0,7:11,29:3,3|5,2|9,1|10,1:313.405:326.675,113.385:1.08025,1.08025:0.0,1.55196e-08,1.0
-chr1	9422121	.	AATAAATAAATA	.	.	.	END=9422132;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998933:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.022:326.675,113.385:0.0,0.0:2.4053e-41,0.000576164,0.999424
-chr1	9424740	.	TCTCTTCTCTTCTCT	.	.	.	END=9424754;RU=tctct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997447:3,3:3-3,3-3:12,8,0,0:3,12:NULL:121.749:326.675,113.385:0.0,0.0:3.67533e-40,0.00153279,0.998473
-chr1	9431832	.	AAACCAAAACCAAAACCA	.	.	.	END=9431849;RU=aaacca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,6,0,0:3,19:NULL:134.242:326.675,113.385:0.0,0.0:0.0,1.72612e-05,0.999986
-chr1	9435914	.	ACAGAGACAGAGACAGAGACAGAG	.	.	.	END=9435937;RU=acagag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999746:4,4:3-4,3-4:15,8,0,3:4,15:2,2|3,1:155.267:326.675,113.385:0.374147,0.374147:7e-45,0.00014349,0.999857
-chr1	9438550	.	AAATCAAATCAAATC	.	.	.	END=9438564;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:208.921:326.675,113.385:0.0,0.0:0.0,4.69581e-06,0.999995
-chr1	9440244	.	CCACCACCACCACCACCA	.	.	.	END=9440261;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:6,6:6-6,6-6:22,7,0,2:6,22:5,2:161.055:326.675,113.385:0.0,0.0:0.0,8.65582e-07,1.0
-chr1	9440854	.	TTATTATTATTATTA	.	.	.	END=9440868;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.981375:5,5:5-5,5-5:9,4,0,2:5,9:4,2:90.8043:326.675,113.385:0.0,0.0:8.55695e-23,0.00799974,0.992018
-chr1	9442366	.	TCTCTCTCTCTCTC	.	.	.	END=9442379;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990911:7,7:6-8,6-8:11,21,0,0:7,11:NULL:231.834:326.675,113.385:0.446534,0.446534:6.00934e-24,0.00629505,0.993721
-chr1	9443711	.	ATACATACATACATAC	.	.	.	END=9443726;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993713:4,4:4-4,4-4:11,4,0,0:4,11:NULL:78.9:326.675,113.385:0.0,0.0:1.21939e-30,0.00338957,0.996618
-chr1	9444202	.	ACCCACCCACCC	.	.	.	END=9444213;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991091:3,3:3-3,3-3:10,16,0,0:3,10:NULL:189.381:326.675,113.385:0.0,0.0:1.7653e-30,0.0063046,0.993708
-chr1	9450506	.	GGGTGGGTGGGT	.	.	.	END=9450517;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999917:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.376:326.675,113.385:0.0,0.0:0.0,5.0317e-05,0.999949
-chr1	9452272	.	AAAACAAAACAAAAC	.	.	.	END=9452286;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,9,0,3:3,25:2,3:202.435:326.675,113.385:0.0,0.0:0.0,8.19423e-08,1.0
-chr1	9459770	.	TCTCTCTCTCTC	.	.	.	END=9459781;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998424:6,6:6-7,6-7:13,7,0,0:6,13:NULL:113.472:326.675,113.385:0.345543,0.345543:2.92193e-30,0.000800413,0.999203
-chr1	9461244	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	.	END=9461298;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988769:11,11:6-11,6-11:10,16,0,19:11,10:3,2|4,2|5,3|6,3|7,5|8,1|9,2|10,1:326.85:326.675,113.385:2.23815,2.23815:4.06269e-27,0.00860565,0.991413
-chr1	9462516	.	ATATATATATATATATATATATATAT	.	.	.	END=9462541;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.79068:13,13:11-14,11-14:7,3,0,0:13,7:NULL:60.1106:326.675,113.385:0.783743,0.783743:1.10101e-07,0.0955401,0.904565
-chr1	9463887	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=9463930;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.738784:22,22:21-22,21-22:5,10,0,12:22,5:4,1|5,2|8,1|9,1|11,1|13,1|16,1|17,1|21,3:208.298:326.675,113.385:0.270063,0.270063:6.73055e-07,0.0717911,0.928307
-chr1	9468830	.	GAGGGAGGGAGG	.	.	.	END=9468841;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:196.84:326.675,113.385:0.0,0.0:0.0,4.90263e-07,1.0
-chr1	9470692	.	CACACACACACA	.	.	.	END=9470703;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:25,11,0,5:6,25:4,3|5,2:239.921:326.675,113.385:0.0,0.0:0.0,1.09519e-07,1.0
-chr1	9471535	.	GAGAGGAGAGGAGAG	.	.	.	END=9471549;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.475982:3,3:3-3,3-3:3,3,0,0:3,3:NULL:40.6212:326.675,113.385:0.281439,0.281439:2.60341e-10,0.221156,0.778882
-chr1	9472682	.	ATGAATGAATGA	.	.	.	END=9472693;RU=atga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997079:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.437:326.675,113.385:0.0,0.0:7.52693e-33,0.00197559,0.998033
-chr1	9472967	.	TGTGTGTGTGTGTG	.	.	.	END=9472980;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999708:7,7:7-7,7-7:15,5,0,2:7,15:6,2:120.874:326.675,113.385:0.0,0.0:2.76285e-31,0.000108582,0.999894
-chr1	9474757	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=9474784;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999638:14,14:13-14,13-14:20,20,0,9:12,2|14,18:5,1|7,1|10,3|13,4:347.548:326.675,113.385:0.294378,0.294378:9.25131e-27,0.000345403,0.999658
-chr1	9475821	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9475866;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.415505:23,23:21-23,21-23:6,9,0,16:22,2|23,4:5,1|7,1|8,1|9,2|10,1|11,2|14,2|16,1|17,1|18,1|19,1|20,2:246.597:326.675,113.385:0.716027,0.716027:0.000398632,0.510801,0.488861
-chr1	9476189	.	GCAGGCAGGCAG	.	.	.	END=9476200;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,13,0,2:3,19:2,2:208.939:326.675,113.385:0.0,0.0:0.0,6.78018e-06,0.999994
-chr1	9482508	.	AATTAATTAATTAATTAATT	.	.	.	END=9482527;RU=aatt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990887:5,5:5-5,5-5:10,8,0,0:5,10:NULL:112.505:326.675,113.385:0.0,0.0:1.32822e-28,0.00598998,0.994023
-chr1	9482533	.	AAAGAAAGAAAG	.	.	.	END=9482544;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999906:3,3:3-3,3-3:16,11,0,0:3,16:NULL:162.705:326.675,113.385:0.0,0.0:0.0,5.78138e-05,0.999942
-chr1	9491448	.	AAATAAATAAATAAAT	.	.	.	END=9491463;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987186:4,4:4-4,4-4:10,1,0,0:4,10:NULL:50.208:326.675,113.385:0.0,0.0:6.382e-32,0.00633264,0.993684
-chr1	9496534	.	GAGGGAGGGAGG	.	.	.	END=9496545;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,7,0,0:3,28:NULL:174.907:326.675,113.385:0.0,0.0:0.0,2.73175e-08,1.0
-chr1	9497089	.	ACCAACCAACCA	.	.	.	END=9497100;RU=acca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:222.338:326.675,113.385:0.0,0.0:0.0,1.24897e-06,1.0
-chr1	9497489	.	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=9497533;RU=att;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.875025:15,15:15-15,15-15:6,9,0,8:15,6:4,1|6,2|8,1|10,1|11,1|13,1|14,1:168.58:326.675,113.385:0.29703,0.29703:1.54199e-10,0.051828,0.948252
-chr1	9497958	.	TTTGTTTGTTTG	.	.	.	END=9497969;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:157.936:326.675,113.385:0.0,0.0:0.0,6.28813e-08,1.0
-chr1	9502657	.	ACACACACACAC	.	.	.	END=9502668;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999982:6,6:6-6,6-6:18,4,0,2:6,18:4,1|5,1:123.674:326.675,113.385:0.0,0.0:2.646e-42,2.0149e-05,0.99998
-chr1	9504503	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=9504522;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999891:4,4:4-4,4-4:17,5,0,0:4,17:NULL:115.806:326.675,113.385:0.0,0.0:0.0,7.52509e-05,0.999926
-chr1	9508248	.	CAAACAAACAAA	.	.	.	END=9508259;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9997:3,3:3-3,3-3:15,20,0,0:3,15:NULL:240.187:326.675,113.385:0.0,0.0:0.0,0.000252808,0.99975
-chr1	9508516	.	ATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	.	END=9508554;RU=ata;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.91691:13,13:13-14,13-14:8,15,0,9:13,8:3,1|4,3|5,1|7,1|8,2|10,1:246.436:326.675,113.385:0.374147,0.374147:5.2725e-12,0.0673377,0.932756
-chr1	9508833	.	CACACACACACACACACA	.	.	.	END=9508850;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999883:9,9:9-11,9-11:17,7,0,2:9,17:5,1|8,1:149.286:326.675,113.385:0.691086,0.691086:8.54708e-30,4.60868e-05,0.999956
-chr1	9511167	.	TTATTTATTTAT	.	.	.	END=9511178;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:258.692:326.675,113.385:0.0,0.0:0.0,5.52396e-07,1.0
-chr1	9514249	.	TGGATGGATGGATGGA	.	.	.	END=9514264;RU=tgga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999927:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:178.978:326.675,113.385:0.0,0.0:0.0,3.8318e-05,0.999963
-chr1	9516045	.	AAAGAAAGAAAG	.	.	.	END=9516056;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999451:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.773:326.675,113.385:0.0,0.0:0.0,0.000288093,0.999713
-chr1	9516633	.	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	.	.	END=9516692;RU=gggag;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.00037075:8,8:8-8,8-8:0,1,0,0:NULL:NULL:8.16001:326.675,113.385:0.0,0.0:0.0410663,0.409397,0.549689
-chr1	9517848	.	ATTTATTTATTT	.	.	.	END=9517859;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98931:3,3:3-3,3-3:11,15,0,0:3,11:NULL:186.743:326.675,113.385:0.19802,0.19802:5.67931e-35,0.00761143,0.992408
-chr1	9522426	.	TTTGTTTGTTTG	.	.	.	END=9522437;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:216.985:326.675,113.385:0.0,0.0:0.0,1.61937e-07,1.0
-chr1	9525101	.	CACACACACACACACACA	.	.	.	END=9525118;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998546:9,9:9-9,9-9:13,12,0,3:9,13:4,2|8,1:190.377:326.675,113.385:0.0,0.0:6.30261e-22,0.000801553,0.999202
-chr1	9525246	.	ATGAATGAATGAATGAATGAATGA	.	.	.	END=9525269;RU=atga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:6,6:5-6,5-6:16,14,0,3:6,16:3,1|5,2:213.876:326.675,113.385:0.345543,0.345543:1e-45,0.000123183,0.999879
-chr1	9525501	.	AAACAAACAAACAAAC	.	.	.	END=9525516;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999956:4,4:4-4,4-4:17,10,0,5:4,17:2,1|3,4:196.242:326.675,113.385:0.0,0.0:0.0,2.47553e-05,0.999978
-chr1	9525744	.	GAGGAGGAGGAG	.	.	.	END=9525755;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999892:4,4:4-4,4-4:16,17,0,2:4,16:3,2:236.803:326.675,113.385:0.0,0.0:0.0,6.3783e-05,0.99994
-chr1	9526193	.	AAACAAACAAACAAAC	.	.	.	END=9526208;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991715:4,4:4-4,4-4:11,11,0,0:4,11:NULL:144.452:326.675,113.385:0.0,0.0:3.33123e-34,0.00610614,0.99391
-chr1	9526390	.	AAATAAATAAAT	.	.	.	END=9526401;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999751:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.747:326.675,113.385:0.0,0.0:0.0,0.000140297,0.999864
-chr1	9529332	.	ACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9529373;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.68762:21,21:20-21,20-21:8,14,0,13:20,2|21,6:8,2|10,3|11,1|12,2|13,1|15,2|18,1|20,1:277.011:326.675,113.385:0.382696,0.382696:1.44107e-06,0.28187,0.718132
-chr1	9533361	.	AGAGAGAGAGAG	.	.	.	END=9533372;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:193.621:326.675,113.385:0.0,0.0:0.0,8.066e-06,0.999994
-chr1	9533849	.	AAATAAATAAAT	.	.	.	END=9533860;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994368:3,3:3-3,3-3:11,6,0,0:3,11:NULL:102.525:326.675,113.385:0.0,0.0:1.5121e-35,0.00279059,0.997216
-chr1	9536352	.	CCCACCCACCCA	.	.	.	END=9536363;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999949:3,3:3-3,3-3:17,15,0,0:3,17:NULL:211.421:326.675,113.385:0.0,0.0:0.0,4.53939e-05,0.999956
-chr1	9536489	.	TGGAGCTGGAGCTGGAGC	.	.	.	END=9536506;RU=tggagc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,4,0,2:3,23:2,2:141.472:326.675,113.385:0.0,0.0:0.0,3.16403e-07,1.0
-chr1	9541751	.	TATATTATATTATAT	.	.	.	END=9541765;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999729:3,3:3-3,3-3:15,3,0,0:3,15:NULL:84.3241:326.675,113.385:0.0,0.0:1e-45,0.000132508,0.999871
-chr1	9542204	.	TATTTATTTATTTATT	.	.	.	END=9542219;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999828:4,4:4-4,4-4:16,12,0,2:4,16:3,2:187.136:326.675,113.385:0.0,0.0:3e-45,0.000103024,0.999896
-chr1	9544492	.	AAACAAACAAAC	.	.	.	END=9544503;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999936:3,3:3-3,3-3:17,12,0,0:3,17:NULL:171.869:326.675,113.385:0.0,0.0:0.0,4.52417e-05,0.999956
-chr1	9544579	.	AAATAAATAAAT	.	.	.	END=9544590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.482:326.675,113.385:0.0,0.0:0.0,4.78866e-07,1.0
-chr1	9544631	.	CAAACAAACAAACAAACAAA	.	.	.	END=9544650;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999989:5,5:5-5,5-5:17,8,0,5:5,17:3,1|4,4:180.185:326.675,113.385:0.0,0.0:4e-45,1.66117e-05,0.999986
-chr1	9550027	.	AGGCAGGCTGAGGCAGGCTGAGGCAGGCTG	.	.	.	END=9550056;RU=aggcaggctg;PERIOD=10;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991697:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.68:326.675,113.385:0.0,0.0:3.84619e-14,0.00708497,0.992933
-chr1	9551002	.	TGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9551022;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:30,12,0,4:7,30:3,1|4,1|5,1|6,1:257.203:326.675,113.385:0.0,0.0:0.0,4.08431e-09,1.0
-chr1	9551523	.	GAAAGAAAGAAA	.	.	.	END=9551534;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.768:326.675,113.385:0.0,0.0:0.0,1.69865e-06,1.0
-chr1	9553997	.	ACAGACAGACAG	.	.	.	END=9554008;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999424:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.558:326.675,113.385:0.0,0.0:0.0,0.000310663,0.99969
-chr1	9555100	.	CATACATACATACATA	.	.	.	END=9555115;RU=cata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,11,0,4:4,28:3,4:240.061:326.675,113.385:0.0,0.0:0.0,7.57256e-09,1.0
-chr1	9557814	.	AGGCAGGCAGGC	.	.	.	END=9557825;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,19,0,2:3,28:2,2:303.728:326.675,113.385:0.0,0.0:0.0,2.70369e-08,1.0
-chr1	9559035	.	TTTATTTATTTA	.	.	.	END=9559046;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999997:3,3:2-3,2-3:18,8,0,2:3,18:2,2:159.677:326.675,113.385:0.253975,0.253975:0.0,9.92915e-06,0.999993
-chr1	9559216	.	CTATCTATCTAT	.	.	.	END=9559227;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99055:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.843:326.675,113.385:0.0,0.0:1.5807e-32,0.00583339,0.994181
-chr1	9559239	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=9559262;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.975961:4,4:4-4,4-4:9,12,0,3:4,9:2,2|3,1:166.59:326.675,113.385:0.0,0.0:1.77814e-26,0.0163539,0.983681
-chr1	9561161	.	AAAGAAAGAAAG	.	.	.	END=9561172;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999957:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.958:326.675,113.385:0.0,0.0:0.0,3.4985e-05,0.999964
-chr1	9567718	.	ACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9567759;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998695:21,21:18-21,18-21:16,17,0,18:21,16:4,1|5,1|7,4|8,2|9,2|10,1|11,3|12,1|13,1|16,1|19,1:371.306:326.675,113.385:0.712046,0.712046:2.3557e-18,0.000297949,0.999705
-chr1	9569212	.	GTGGTGGTGGTG	.	.	.	END=9569223;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991951:4,4:4-4,4-4:11,19,0,0:4,11:NULL:216.225:326.675,113.385:0.0,0.0:2.08963e-30,0.00592683,0.99409
-chr1	9571015	.	AAAGGAAAGGAAAGG	.	.	.	END=9571029;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.53:326.675,113.385:0.0,0.0:0.0,2.13318e-05,0.999979
-chr1	9571032	.	AAAGGAAAGGAAAGG	.	.	.	END=9571046;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999955:3,3:3-3,3-3:17,16,0,3:3,17:2,3:239.298:326.675,113.385:0.0,0.0:0.0,3.66339e-05,0.999964
-chr1	9571264	.	AGATTAGATTAGATTAGATT	.	.	.	END=9571283;RU=agatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:246.326:326.675,113.385:0.0,0.0:0.0,1.61577e-06,1.0
-chr1	9571292	.	CATACATACATA	.	.	.	END=9571303;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999841:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.408:326.675,113.385:0.0,0.0:4.61e-43,0.000103159,0.999896
-chr1	9571354	.	GATTGATTGATT	.	.	.	END=9571365;RU=gatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,12,0,2:3,18:2,2:191.128:326.675,113.385:0.0,0.0:0.0,1.34985e-05,0.999987
-chr1	9575481	.	TGGTGGTGGTGG	.	.	.	END=9575492;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,23,0,0:4,28:NULL:322.028:326.675,113.385:0.0,0.0:0.0,2.93502e-08,1.0
-chr1	9579567	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9579598;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.865572:16,16:15-16,15-16:18,7,0,8:15,5|16,13:7,2|9,1|11,1|13,2|15,1|16,1:210.355:326.675,113.385:0.442564,0.442564:1.78213e-20,0.13442,0.865673
-chr1	9579965	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9579994;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.982053:15,15:14-15,14-15:15,3,0,7:14,2|15,13:6,1|10,2|11,1|13,2|14,1:151.138:326.675,113.385:0.236383,0.236383:1.49043e-14,0.0174023,0.982635
-chr1	9579994	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=9580031;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999096:19,19:19-19,19-19:15,2,0,5:19,15:15,1|16,1|17,2|18,1:125.664:326.675,113.385:0.0,0.0:2.3307e-29,0.000121848,0.99988
-chr1	9582597	.	CCTCCTCCTCCT	.	.	.	END=9582608;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999283:4,4:4-4,4-4:13,16,0,2:4,13:3,2:218.782:326.675,113.385:0.0,0.0:9.46324e-39,0.00046551,0.999537
-chr1	9583195	.	AAATAAATAAATAAAT	.	.	.	END=9583210;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999477:4,4:3-5,3-5:14,7,0,4:4,14:3,4:143.282:326.675,113.385:0.633818,0.633818:4.2e-44,0.000160403,0.999842
-chr1	9583659	.	AACCAACCAACC	.	.	.	END=9583670;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:176.01:326.675,113.385:0.0,0.0:0.0,1.07304e-06,1.0
-chr1	9585234	.	AGAGAGAGAGAG	.	.	.	END=9585245;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999978:6,6:6-7,6-7:18,12,0,0:6,18:NULL:181.935:326.675,113.385:0.236383,0.236383:4.664e-42,3.27745e-05,0.99997
-chr1	9587125	.	TAAATAAATAAA	.	.	.	END=9587136;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:204.769:326.675,113.385:0.0,0.0:0.0,4.47188e-07,1.0
-chr1	9588885	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9588932;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.776549:24,24:23-25,23-25:9,10,0,16:23,2|24,7:8,2|11,1|12,2|13,2|14,3|15,3|16,1|18,1|21,1:266.77:326.675,113.385:0.532817,0.532817:2.4315e-08,0.173489,0.826583
-chr1	9591730	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9591759;RU=tc;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/1:0.025942:12,12:12-15,12-15:0,5,0,2:NULL:6,1|8,1:58.7703:326.675,113.385:1.46059,1.46059:0.206663,0.496322,0.297103
-chr1	9591759	.	CACACACACACACACA	.	.	.	END=9591774;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.930569:8,8:7-8,7-8:8,3,0,0:8,8:NULL:59.1515:326.675,113.385:0.35561,0.35561:3.91321e-11,0.0389658,0.961101
-chr1	9591774	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=9591823;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.178814:25,25:22-25,22-25:2,3,0,4:25,2:5,1|10,1|12,1|17,1:67.505:326.675,113.385:0.707349,0.707349:0.00626058,0.457123,0.53674
-chr1	9600354	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9600391;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.849525:19,20:18-19,18-20:13,6,0,12:18,2|19,8|20,3:4,2|6,2|7,1|13,1|14,2|15,1|16,2|18,1:220.619:326.675,113.385:0.169767,0.620058:1.20253e-11,0.00373575,0.996277
-chr1	9600392	.	AGAGAGAGAGAGAGAGAG	.	.	.	END=9600409;RU=ag;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999832:9,9:8-9,8-9:23,7,0,2:8,2|9,21:6,1|9,1:179.499:326.675,113.385:0.195027,0.195027:0.0,0.000174119,0.999827
-chr1	9601375	.	AAGAAAGAAAGAAAGAAAGA	.	.	.	END=9601394;RU=aaga;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999919:5,5:5-5,5-5:17,6,0,2:5,17:2,1|4,1:142.303:326.675,113.385:0.0,0.0:1.65e-43,3.54743e-05,0.999964
-chr1	9606362	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9606389;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999707:14,14:14-14,14-14:27,15,0,11:13,4|14,23:6,1|8,1|9,1|11,1|12,3|13,4:351.894:326.675,113.385:0.139319,0.139319:1.02861e-27,0.000300045,0.999704
-chr1	9608925	.	AAAACAAAACAAAACAAAAC	.	.	.	END=9608944;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999873:4,4:4-4,4-4:16,3,0,3:4,16:2,1|3,2:111.98:326.675,113.385:0.0,0.0:0.0,4.67673e-05,0.999956
-chr1	9611150	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9611195;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994831:23,23:23-24,23-24:13,10,0,15:23,13:4,1|8,1|9,1|10,1|13,1|14,1|16,2|18,2|20,4|22,1:271.859:326.675,113.385:0.344691,0.344691:1.28818e-14,0.00110153,0.9989
-chr1	9612365	.	AAACAAACAAAC	.	.	.	END=9612376;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:257.034:326.675,113.385:0.0,0.0:0.0,1.22239e-06,1.0
-chr1	9615067	.	AAGGAAAGGAAAGGA	.	.	.	END=9615081;RU=aagga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994808:3,3:3-3,3-3:11,9,0,0:3,11:NULL:125.05:326.675,113.385:0.0,0.0:8.87133e-32,0.0033707,0.99664
-chr1	9615435	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9615462;RU=tg;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.988039:14,14:13-14,13-14:17,8,0,16:13,3|14,14:5,2|6,4|7,2|8,1|9,2|10,1|11,2|12,2:282.1:326.675,113.385:0.284901,0.284901:8.18095e-17,0.0116994,0.988324
-chr1	9615830	.	ACACACACACACACAC	.	.	.	END=9615845;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:25,14,0,0:8,25:NULL:232.466:326.675,113.385:0.0990099,0.0990099:2.2519e-41,6.3841e-07,1.0
-chr1	9618148	.	GTTTTGTGTTTTGTGTTTTGT	.	.	.	END=9618168;RU=gttttgt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999542:3,3:3-3,3-3:15,17,0,0:3,15:NULL:215.623:326.675,113.385:0.0,0.0:0.0,0.000414123,0.99959
-chr1	9618314	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=9618343;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.398018:15,15:6-16,6-16:7,9,0,9:14,2|15,5:4,3|5,2|6,1|7,1|12,2:195.299:326.675,113.385:4.2295,4.2295:1.62833e-05,0.564795,0.435288
-chr1	9622730	.	CCATCCATCCAT	.	.	.	END=9622741;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.449397:3,3:2-3,2-3:20,17,0,2:2,2|3,18:2,2:263.617:326.675,113.385:0.484441,0.484441:0.0,0.550717,0.449392
-chr1	9623134	.	AAACAAACAAAC	.	.	.	END=9623145;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:247.555:326.675,113.385:0.0,0.0:0.0,1.54894e-07,1.0
-chr1	9626974	.	TGTGTGTGTGTG	.	.	.	END=9626985;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997736:6,6:6-6,6-6:12,8,0,2:6,12:4,2:138.635:326.675,113.385:0.0,0.0:2.33487e-30,0.00106104,0.998944
-chr1	9629064	.	ACACACACACACAC	.	.	.	END=9629077;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:7,7:7-7,7-7:22,17,0,0:7,22:NULL:239.609:326.675,113.385:0.0,0.0:0.0,2.05518e-06,1.0
-chr1	9630961	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=9630988;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.911054:14,14:12-15,12-15:8,7,0,2:14,8:8,1|13,1:116.934:326.675,113.385:0.670203,0.670203:4.68467e-11,0.036892,0.963175
-chr1	9632449	.	TATTTATTTATT	.	.	.	END=9632460;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999721:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.398:326.675,113.385:0.0,0.0:0.0,0.000167424,0.999834
-chr1	9638514	.	ACATACATACAT	.	.	.	END=9638525;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,13,0,4:3,27:2,4:249.201:326.675,113.385:0.0,0.0:0.0,1.83583e-08,1.0
-chr1	9640123	.	TAAATAAATAAA	.	.	.	END=9640134;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:334.737:326.675,113.385:0.0,0.0:0.0,9.27498e-09,1.0
-chr1	9643772	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9643803;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.76529:14,16:10-16,16-16:14,11,0,8:13,2|14,2|15,2|16,8:5,1|7,1|8,1|10,1|11,1|12,1|13,1|14,1:240.834:326.675,113.385:1.4234,0.60323:8.8141e-09,0.975704,0.0243449
-chr1	9646643	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=9646702;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.314643:15,17:15-15,15-20:5,7,0,6:15,5:4,1|6,1|7,1|12,1|14,1|17,1:138.479:326.675,113.385:0.0,1.42485:3.16289e-17,5.02754e-08,1.0
-chr1	9647869	.	AAAACAAAACAAAAC	.	.	.	END=9647883;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,13,0,0:3,29:NULL:236.008:326.675,113.385:0.0,0.0:0.0,1.02047e-08,1.0
-chr1	9648036	.	CACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=9648079;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.953332:22,22:21-22,21-22:17,20,0,19:21,5|22,12:5,3|6,1|9,3|10,1|13,1|14,1|15,3|16,1|17,1|18,1|19,1|21,1|22,1:429.358:326.675,113.385:0.298675,0.298675:1.24157e-18,0.0456814,0.954391
-chr1	9648525	.	AACAACAACAACAAC	.	.	.	END=9648539;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:5,5:5-5,5-5:18,11,0,2:5,18:4,2:186.423:326.675,113.385:0.0,0.0:0.0,1.53856e-05,0.999986
-chr1	9649233	.	AGCAGCAGCAGCAGCAGC	.	.	.	END=9649250;RU=agc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,5,0,4:6,24:5,4:171.0:326.675,113.385:0.0,0.0:0.0,1.31746e-07,1.0
-chr1	9649872	.	AGACAGACAGAC	.	.	.	END=9649883;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:246.077:326.675,113.385:0.0,0.0:0.0,1.99257e-06,1.0
-chr1	9650822	.	AGGCAGGCAGGC	.	.	.	END=9650833;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:241.716:326.675,113.385:0.0,0.0:0.0,2.43994e-08,1.0
-chr1	9653697	.	AATTAATTAATT	.	.	.	END=9653708;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:210.987:326.675,113.385:0.0,0.0:0.0,1.87657e-06,1.0
-chr1	9654181	.	ACACACACACACACAC	.	.	.	END=9654196;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998193:8,8:8-9,8-9:29,6,0,4:8,26|9,3:5,2|6,1|7,1:220.67:326.675,113.385:0.345543,0.345543:0.0,1.40534e-08,1.0
-chr1	9654418	.	TGTTTGTTTGTT	.	.	.	END=9654429;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:246.432:326.675,113.385:0.0,0.0:0.0,3.09154e-07,1.0
-chr1	9657317	.	TAGGTAGGTAGGTAGG	.	.	.	END=9657332;RU=tagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:158.96:326.675,113.385:0.0,0.0:0.0,3.75096e-06,1.0
-chr1	9657503	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=9657520;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.9955:9,9:8-10,8-10:22,5,0,4:8,2|9,18|10,2:5,2|8,2:180.788:326.675,113.385:0.487064,0.487064:2.29285e-31,0.000320013,0.999682
-chr1	9657524	.	GACAGACAGACA	.	.	.	END=9657535;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,5,0,2:3,23:2,2:150.605:326.675,113.385:0.0,0.0:0.0,3.26794e-07,1.0
-chr1	9658926	.	CCCACCCCCACCCCCACC	.	.	.	END=9658943;RU=cccacc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.951281:3,3:3-3,3-3:8,19,0,0:3,8:NULL:214.396:326.675,113.385:0.19802,0.19802:5.9391e-24,0.0431802,0.95689
-chr1	9659382	.	GGTTGGTTGGTTGGTT	.	.	.	END=9659397;RU=ggtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:235.149:326.675,113.385:0.0,0.0:0.0,8.22004e-08,1.0
-chr1	9660032	.	AATTAATTAATT	.	.	.	END=9660043;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.962574:3,3:3-3,3-3:8,4,0,0:3,8:NULL:69.585:326.675,113.385:0.0,0.0:3.78813e-27,0.0192602,0.980778
-chr1	9661858	.	TATTTATTTATT	.	.	.	END=9661869;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999909:3,3:3-3,3-3:16,13,0,4:3,16:2,4:212.817:326.675,113.385:0.0,0.0:0.0,5.11926e-05,0.999949
-chr1	9663095	.	CTTCTTCTTCTTCTT	.	.	.	END=9663109;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,16,0,0:5,21:NULL:225.4:326.675,113.385:0.0,0.0:0.0,3.45165e-06,1.0
-chr1	9667084	.	GTGGGTGGGTGG	.	.	.	END=9667095;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:45,16,0,3:3,45:2,3:346.008:326.675,113.385:0.0,0.0:0.0,9.71045e-14,1.0
-chr1	9670565	.	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	.	.	.	END=9670612;RU=agagac;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999883:8,8:8-8,8-8:16,20,0,11:8,16:2,1|3,2|4,4|5,1|7,3:323.809:326.675,113.385:0.0,0.0:1e-45,8.4119e-05,0.999918
-chr1	9671049	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9671068;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999895:4,4:4-4,4-4:16,8,0,4:4,16:3,4:168.625:326.675,113.385:0.0,0.0:0.0,5.65325e-05,0.999947
-chr1	9677855	.	AATTAATTAATT	.	.	.	END=9677866;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:3,3:3-3,3-3:19,5,0,0:3,19:NULL:121.778:326.675,113.385:0.0,0.0:0.0,1.26746e-05,0.999987
-chr1	9679931	.	TTAATTAATTAA	.	.	.	END=9679942;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999972:3,3:3-3,3-3:18,5,0,0:3,18:NULL:119.233:326.675,113.385:0.0,0.0:0.0,2.05989e-05,0.999979
-chr1	9680037	.	AAATAAATAAAT	.	.	.	END=9680048;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.920147:3,3:3-3,3-3:7,8,0,0:3,7:NULL:101.501:326.675,113.385:0.0,0.0:1.12079e-23,0.0432247,0.956847
-chr1	9682805	.	TTTGTTTTGTTTTGT	.	.	.	END=9682819;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:212.141:326.675,113.385:0.0,0.0:0.0,9.4052e-07,1.0
-chr1	9683361	.	AAAACAAAACAAAAC	.	.	.	END=9683375;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:256.143:326.675,113.385:0.0,0.0:0.0,5.61949e-08,1.0
-chr1	9687633	.	TCTTCTTCTTCT	.	.	.	END=9687644;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,22,0,2:4,20:3,2:285.82:326.675,113.385:0.0,0.0:0.0,6.53391e-06,0.999994
-chr1	9687930	.	CAACAACAACAACAA	.	.	.	END=9687944;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:22,7,0,2:5,22:4,2:168.444:326.675,113.385:0.0,0.0:0.0,1.00261e-06,1.0
-chr1	9688759	.	ATTATTATTATT	.	.	.	END=9688770;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:181.887:326.675,113.385:0.0,0.0:0.0,1.26347e-06,1.0
-chr1	9688938	.	TTTGTTTGTTTG	.	.	.	END=9688949;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:193.646:326.675,113.385:0.0,0.0:0.0,1.62571e-06,1.0
-chr1	9689761	.	ACACACACACACACACACAC	.	.	.	END=9689780;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:10,10:10-10,10-10:32,12,0,12:9,2|10,28|11,2:4,1|5,2|6,4|7,4|9,1:354.602:326.675,113.385:0.430892,0.430892:2.5e-44,2.95574e-07,1.0
-chr1	9691108	.	ATTTATTTATTT	.	.	.	END=9691119;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999853:3,3:3-3,3-3:16,3,0,0:3,16:NULL:89.7674:326.675,113.385:0.0,0.0:0.0,6.84543e-05,0.999933
-chr1	9691851	.	AGTAAGTAAGTAAGTA	.	.	.	END=9691866;RU=agta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:177.721:326.675,113.385:0.0,0.0:0.0,4.7318e-06,0.999995
-chr1	9694314	.	ATACATACATAC	.	.	.	END=9694325;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:208.619:326.675,113.385:0.0,0.0:0.0,7.87691e-08,1.0
-chr1	9695885	.	AAATAAATAAAT	.	.	.	END=9695896;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:201.333:326.675,113.385:0.0,0.0:0.0,3.61883e-06,1.0
-chr1	9696536	.	AAATAAATAAAT	.	.	.	END=9696547;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:122.673:326.675,113.385:0.0,0.0:0.0,5.87155e-06,0.999995
-chr1	9699257	.	ACAACAACAACA	.	.	.	END=9699268;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,11,0,3:4,25:3,3:222.319:326.675,113.385:0.0,0.0:0.0,1.11363e-07,1.0
-chr1	9703468	.	AAACAAACAAAC	.	.	.	END=9703479;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996173:3,3:3-3,3-3:11,6,0,2:3,11:2,2:112.545:326.675,113.385:0.0,0.0:4.16261e-36,0.00136399,0.998641
-chr1	9703640	.	TTGTTGTTGTTG	.	.	.	END=9703651;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:125.859:326.675,113.385:0.0,0.0:0.0,9.80125e-06,0.999993
-chr1	9704060	.	TGGTTTTGGTTTTGGTTT	.	.	.	END=9704077;RU=tggttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.201:326.675,113.385:0.0,0.0:0.0,5.56269e-06,0.999995
-chr1	9705815	.	GTTTGTTTGTTTGTTT	.	.	.	END=9705830;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999993:4,4:4-4,4-4:19,7,0,0:4,19:NULL:141.001:326.675,113.385:0.0,0.0:0.0,1.56908e-05,0.999986
-chr1	9710499	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=9710522;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999938:6,6:6-6,6-6:18,7,0,3:6,18:2,2|3,1:160.473:326.675,113.385:0.0,0.0:0.0,4.24882e-05,0.999957
-chr1	9710692	.	TTTGTTTGTTTG	.	.	.	END=9710703;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:139.644:326.675,113.385:0.0,0.0:0.0,4.75786e-06,0.999995
-chr1	9710885	.	ATTTATTTATTTATTT	.	.	.	END=9710900;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999157:4,4:4-4,4-4:13,10,0,5:4,13:3,5:177.402:326.675,113.385:0.0,0.0:4.21589e-40,0.000347666,0.999653
-chr1	9712334	.	TAAATAAATAAATAAATAAA	.	.	.	END=9712353;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.991102:5,5:5-5,5-5:10,10,0,2:5,10:4,2:149.796:326.675,113.385:0.0,0.0:1.02584e-24,0.00490215,0.995108
-chr1	9712678	.	TGTATGTATGTA	.	.	.	END=9712689;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.328:326.675,113.385:0.0,0.0:0.0,6.61577e-07,1.0
-chr1	9712838	.	GGCTGGCTGGCT	.	.	.	END=9712849;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:160.56:326.675,113.385:0.0,0.0:0.0,2.80029e-06,1.0
-chr1	9713883	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9713918;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.634928:18,18:17-18,17-18:11,11,0,13:17,3|18,8:6,2|8,1|10,1|11,2|12,1|13,1|14,2|16,2|18,1:256.984:326.675,113.385:0.45695,0.45695:1.01629e-14,0.360848,0.639196
-chr1	9719437	.	TAAATAAATAAA	.	.	.	END=9719448;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.708:326.675,113.385:0.0,0.0:0.0,3.85455e-07,1.0
-chr1	9725821	.	AAACAAACAAACAAACAAAC	.	.	.	END=9725840;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999871:5,5:5-5,5-5:16,5,0,5:5,16:2,2|3,1|4,2:147.576:326.675,113.385:0.0,0.0:0.0,5.49581e-05,0.999948
-chr1	9725879	.	AATAAATAAATA	.	.	.	END=9725890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999126:3,3:3-3,3-3:13,8,0,2:3,13:2,2:138.552:326.675,113.385:0.0,0.0:2.34e-43,0.000423082,0.999582
-chr1	9726064	.	ACAACAACAACA	.	.	.	END=9726075;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999997:4,4:4-4,4-4:18,6,0,3:4,18:3,3:146.303:326.675,113.385:0.0,0.0:0.0,1.10421e-05,0.999993
-chr1	9726319	.	GAAAGAAAGAAA	.	.	.	END=9726330;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999991:3,3:3-3,3-3:18,11,0,2:3,18:2,2:185.272:326.675,113.385:0.0,0.0:0.0,1.32864e-05,0.999987
-chr1	9726354	.	TATTTATTTATT	.	.	.	END=9726365;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:204.567:326.675,113.385:0.0,0.0:0.0,1.8859e-06,1.0
-chr1	9727029	.	AAAACAAAACAAAACAAAAC	.	.	.	END=9727048;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:23,17,0,5:4,23:2,1|3,4:276.386:326.675,113.385:0.0,0.0:0.0,2.68601e-07,1.0
-chr1	9728119	.	TTGTTGTTGTTG	.	.	.	END=9728130;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999951:4,4:4-4,4-4:18,5,0,0:4,18:NULL:116.76:326.675,113.385:0.0,0.0:0.0,3.20147e-05,0.999971
-chr1	9728313	.	ATATATATATATATATAT	.	.	.	END=9728330;RU=at;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.673641:9,9:9-10,9-10:5,13,0,0:9,5:NULL:142.839:326.675,113.385:0.603392,0.603392:1.10353e-05,0.188155,0.8119
-chr1	9729577	.	TTGTTGTTGTTG	.	.	.	END=9729588;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:28,15,0,3:4,28:3,3:269.199:326.675,113.385:0.0,0.0:0.0,1.38348e-08,1.0
-chr1	9729594	.	ATTTATTTATTTATTT	.	.	.	END=9729609;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:3-4,3-4:27,15,0,3:4,27:3,3:267.498:326.675,113.385:0.169767,0.169767:0.0,3.26584e-08,1.0
-chr1	9730050	.	TGTGTGTGTGTGTGTG	.	.	.	END=9730065;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:45,15,0,5:8,45:5,1|6,1|7,3:360.851:326.675,113.385:0.835916,0.835916:0.0,1.68201e-13,1.0
-chr1	9730553	.	AGGAGGAGGAGG	.	.	.	END=9730564;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:20,18,0,0:4,20:NULL:241.989:326.675,113.385:0.0,0.0:0.0,9.69816e-06,0.999993
-chr1	9730578	.	GAGGGAGGGAGG	.	.	.	END=9730589;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:240.53:326.675,113.385:0.0,0.0:0.0,1.10364e-07,1.0
-chr1	9731162	.	AAAATAAAATAAAAT	.	.	.	END=9731176;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:205.696:326.675,113.385:0.0,0.0:0.0,1.97209e-08,1.0
-chr1	9732554	.	AATAATAATAAT	.	.	.	END=9732565;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:24,10,0,2:4,24:3,2:202.029:326.675,113.385:0.0,0.0:0.0,2.81655e-07,1.0
-chr1	9733417	.	ACACACACACACACAC	.	.	.	END=9733432;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:19,13,0,6:8,19:4,1|5,2|7,3:237.836:326.675,113.385:0.0990099,0.0990099:2.27551e-36,5.86533e-06,0.999995
-chr1	9736402	.	GGGTGGGTGGGT	.	.	.	END=9736413;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997205:3,3:3-3,3-3:13,31,0,0:3,13:NULL:332.866:326.675,113.385:0.0,0.0:1.49104e-35,0.00244273,0.997564
-chr1	9736710	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=9736727;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:36,17,0,8:8,2|9,32|10,2:5,6|6,1|9,1:382.691:326.675,113.385:0.0,0.0:0.0,1.24426e-07,1.0
-chr1	9740263	.	TTTGTTTGTTTGTTTG	.	.	.	END=9740278;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:27,10,0,4:4,27:3,4:231.344:326.675,113.385:0.0,0.0:0.0,2.00338e-08,1.0
-chr1	9740932	.	AATAAATAAATA	.	.	.	END=9740943;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999148:3,3:3-3,3-3:13,9,0,2:3,13:2,2:143.419:326.675,113.385:0.0,0.0:8.42605e-38,0.000372926,0.999629
-chr1	9741427	.	ATATATATATATAT	.	.	.	END=9741440;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.98283:7,7:6-7,6-7:9,11,0,2:7,9:6,2:152.903:326.675,113.385:0.40582,0.40582:9.70936e-14,0.00935361,0.990665
-chr1	9742971	.	ACACACACACACACACACACACACACAC	.	.	.	END=9742998;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.673437:14,14:6-14,6-14:10,0,0,5:13,3|14,7:6,1|8,1|11,1|12,1|14,1:88.1707:326.675,113.385:3.81398,3.81398:2.73843e-15,0.316227,0.683785
-chr1	9743019	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9743048;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.714264:14,15:14-15,14-15:4,0,0,2:14,2|15,2:5,1|11,1:35.4905:326.675,113.385:0.492866,0.323567:0.0133686,0.802258,0.184464
-chr1	9743703	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	.	END=9743732;RU=tcttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999756:6,6:6-6,6-6:15,12,0,4:6,15:3,1|4,1|5,2:199.947:326.675,113.385:0.0,0.0:0.0,0.00014613,0.999857
-chr1	9743909	.	AAAACAAAACAAAAC	.	.	.	END=9743923;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,14,0,0:3,31:NULL:250.64:326.675,113.385:0.0,0.0:0.0,5.20746e-09,1.0
-chr1	9748068	.	GCCGCCGCCGCC	.	.	.	END=9748079;RU=gcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,19,0,0:4,22:NULL:267.859:326.675,113.385:0.0,0.0:0.0,4.34809e-06,0.999995
-chr1	9748275	.	TCCTCCTCCTCC	.	.	.	END=9748286;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:288.438:326.675,113.385:0.0,0.0:0.0,4.31425e-09,1.0
-chr1	9748387	.	CACTCACTCACT	.	.	.	END=9748398;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:197.561:326.675,113.385:0.0,0.0:0.0,7.43655e-08,1.0
-chr1	9749147	.	TTTGTTTGTTTGTTTG	.	.	.	END=9749162;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:21,11,0,0:4,21:NULL:188.623:326.675,113.385:0.0,0.0:0.0,4.79595e-06,0.999995
-chr1	9749755	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9749786;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.507991:16,16:15-17,15-17:9,6,0,10:15,2|16,7:6,1|10,2|14,2|15,5:180.248:326.675,113.385:0.606956,0.606956:3.50875e-07,0.483237,0.516843
-chr1	9750225	.	AGTAGTAGTAGT	.	.	.	END=9750236;RU=agt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:149.83:326.675,113.385:0.0,0.0:0.0,2.38812e-06,1.0
-chr1	9752253	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9752286;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.277617:17,28:17-17,17-29:20,13,0,20:16,2|17,15|18,3:4,1|5,1|6,4|9,1|10,3|11,3|12,1|16,2|17,1|22,1|25,1|27,1:398.995:326.675,113.385:0.0,3.61678:9.044e-42,3.50049e-19,1.0
-chr1	9754367	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9754416;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998768:25,25:20-25,20-25:18,8,0,15:24,2|25,16:6,1|7,1|10,1|12,1|13,1|14,1|15,2|20,2|21,2|22,1|24,2:282.635:326.675,113.385:1.19347,1.19347:5.59785e-17,0.000549827,0.999453
-chr1	9755337	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9755366;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.28343:15,18:15-15,14-21:15,14,0,10:14,3|15,12:7,2|8,2|11,1|13,1|14,2|15,1|18,1:292.839:326.675,113.385:0.0,2.01937:2.47547e-24,2.57404e-05,0.999978
-chr1	9755657	.	TTGTTTGTTTGT	.	.	.	END=9755668;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.226:326.675,113.385:0.0,0.0:0.0,1.51129e-08,1.0
-chr1	9756639	.	TACATACATACA	.	.	.	END=9756650;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:130.067:326.675,113.385:0.0,0.0:0.0,1.92148e-05,0.99998
-chr1	9757162	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9757199;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.810248:19,19:17-19,17-19:18,9,0,10:17,2|18,4|19,12:6,1|8,1|10,2|11,1|12,1|15,1|16,3:255.456:326.675,113.385:0.725682,0.725682:5.86452e-12,0.18951,0.81055
-chr1	9758381	.	GAGGGAGGGAGG	.	.	.	END=9758392;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999413:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.155:326.675,113.385:0.0,0.0:0.0,0.000297211,0.999705
-chr1	9760350	.	TCTGTCTGTCTG	.	.	.	END=9760361;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.992456:3,3:3-3,3-3:10,11,0,0:3,10:NULL:145.772:326.675,113.385:0.0,0.0:8.02761e-33,0.00492337,0.995091
-chr1	9762148	.	GCTTGCTTGCTTGCTT	.	.	.	END=9762163;RU=gctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997053:4,4:4-4,4-4:12,3,0,0:4,12:NULL:72.1752:326.675,113.385:0.0,0.0:3.34431e-39,0.0016027,0.998405
-chr1	9762349	.	ATTTATTTATTT	.	.	.	END=9762360;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.86346:3,3:3-3,3-3:6,8,0,0:3,6:NULL:97.6072:326.675,113.385:0.0,0.0:2.96324e-15,0.0753266,0.92477
-chr1	9763714	.	AATAAATAAATAAATA	.	.	.	END=9763729;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999768:4,4:4-4,4-4:16,13,0,0:4,16:NULL:181.07:326.675,113.385:0.0,0.0:0.0,0.000168551,0.999834
-chr1	9763878	.	AAAAACAAAAACAAAAAC	.	.	.	END=9763895;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.123:326.675,113.385:0.0,0.0:0.0,7.80059e-06,0.999994
-chr1	9765363	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9765406;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.72604:21,22:21-22,22-22:7,9,0,11:21,2|22,5:6,1|9,1|10,1|11,2|12,2|13,1|17,1|18,1|20,1:202.097:326.675,113.385:0.499387,0.0990099:2.71366e-05,0.744188,0.255792
-chr1	9765415	.	GCGCGCGCGCGCGC	.	.	.	END=9765428;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997911:7,7:7-7,7-7:13,10,0,0:7,13:NULL:140.463:326.675,113.385:0.0,0.0:7.27135e-33,0.000986207,0.99902
-chr1	9770170	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9770189;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.291365:10,14:10-10,10-14:16,13,0,2:10,16:7,1|13,1:216.461:326.675,113.385:0.0,1.55007:3.90969e-31,1.72145e-07,1.0
-chr1	9770190	.	GCGCGCGCGCGCGCGCGCGC	.	.	.	END=9770209;RU=gc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997978:10,10:10-10,10-10:13,13,0,0:10,13:NULL:176.391:326.675,113.385:0.0,0.0:1.62128e-33,0.00144893,0.998557
-chr1	9770676	.	GCCCAGCCCAGCCCA	.	.	.	END=9770690;RU=gccca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:174.723:326.675,113.385:0.0,0.0:0.0,2.41586e-07,1.0
-chr1	9771804	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9771841;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979498:19,19:18-19,18-19:24,18,0,16:17,2|18,4|19,18:5,1|6,4|9,1|10,1|11,1|12,2|13,2|16,1|17,2|18,1:414.085:326.675,113.385:0.253975,0.253975:4.98745e-19,0.0205358,0.979505
-chr1	9771917	.	CCACCACCACCACCACCACCA	.	.	.	END=9771937;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:24,16,0,5:7,24:3,1|5,1|6,3:286.844:326.675,113.385:0.0,0.0:0.0,2.22096e-07,1.0
-chr1	9772803	.	TATTTATTTATT	.	.	.	END=9772814;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999978:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.7298:326.675,113.385:0.0,0.0:0.0,1.57048e-05,0.999986
-chr1	9773234	.	CACTCACTCACTCACTCACTCACT	.	.	.	END=9773257;RU=cact;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999985:6,6:6-6,6-6:18,14,0,6:6,18:3,3|4,3:238.929:326.675,113.385:0.0,0.0:0.0,2.30818e-05,0.999979
-chr1	9773465	.	AGGGAGGGAGGG	.	.	.	END=9773476;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995156:3,3:3-3,3-3:11,16,0,0:3,11:NULL:188.95:326.675,113.385:0.0,0.0:5.69066e-29,0.00309688,0.996912
-chr1	9775295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9775348;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.420572:27,29:26-27,25-29:10,19,0,32:26,2|27,8:5,2|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,3|16,1|18,1|19,3|21,1|23,1|24,1|26,3|27,1|28,1|29,1:481.528:326.675,113.385:0.363786,0.950392:1.92112e-27,2.60118e-07,1.0
-chr1	9776621	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9776664;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.690203:21,22:21-22,22-22:8,11,0,16:21,4|22,4:6,2|7,1|8,2|11,1|12,2|17,1|18,2|19,1|20,1|21,2|22,1:266.453:326.675,113.385:0.499779,0.0990099:6.32586e-11,0.695356,0.304656
-chr1	9778986	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=9779005;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.989419:4,4:4-4,4-4:9,15,0,4:4,9:3,4:197.918:326.675,113.385:0.0,0.0:1.9785e-29,0.00514016,0.994873
-chr1	9781279	.	ACACACACACAC	.	.	.	END=9781290;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:4-6,4-6:25,8,0,2:6,25:5,2:188.694:326.675,113.385:0.472766,0.472766:0.0,1.46617e-07,1.0
-chr1	9781294	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=9781321;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:7,7:7-7,7-7:24,8,0,4:7,24:3,2|6,2:202.003:326.675,113.385:0.0990099,0.0990099:0.0,3.46566e-07,1.0
-chr1	9782765	.	ACACACACACAC	.	.	.	END=9782776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999979:6,6:6-6,6-6:18,11,0,2:6,18:4,1|5,1:185.59:326.675,113.385:0.0,0.0:5.9746e-41,1.31117e-05,0.999987
-chr1	9783489	.	TTAATTAATTAA	.	.	.	END=9783500;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.977339:3,3:3-3,3-3:9,11,0,0:3,9:NULL:133.384:326.675,113.385:0.0,0.0:7.88699e-29,0.0123908,0.987638
-chr1	9783579	.	TTTTTCTTTTTCTTTTTC	.	.	.	END=9783596;RU=tttttc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,7,0,2:3,24:2,2:172.379:326.675,113.385:0.0,0.0:0.0,2.68502e-07,1.0
-chr1	9784280	.	CACACACACACA	.	.	.	END=9784291;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:37,17,0,8:6,37:4,1|5,7:375.86:326.675,113.385:0.0,0.0:0.0,2.25615e-11,1.0
-chr1	9784615	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=9784632;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.621118:3,3:2-6,2-6:24,34,0,2:2,3|3,21:2,1|5,1:451.761:326.675,113.385:1.18638,1.18638:0.0,0.0207558,0.979286
-chr1	9784654	.	AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	.	.	.	END=9784685;RU=agaggcag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999119:4,4:4-7,4-7:27,21,0,2:4,24|5,3:3,2:334.649:326.675,113.385:0.839777,0.839777:2.4e-44,9.83233e-08,1.0
-chr1	9784706	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=9784741;RU=agaggc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.395279:6,8:6-6,6-9:21,13,0,6:6,21:3,2|4,3|8,1:264.25:326.675,113.385:0.0,1.03293:0.0,1.19432e-07,1.0
-chr1	9786376	.	GTTTGGTTTGGTTTG	.	.	.	END=9786390;RU=gtttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:189.598:326.675,113.385:0.0,0.0:0.0,5.16134e-06,0.999995
-chr1	9788816	.	AACAACAACAAC	.	.	.	END=9788827;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99973:4,4:4-4,4-4:15,4,0,2:4,15:3,2:112.361:326.675,113.385:0.0,0.0:0.0,0.000101813,0.999902
-chr1	9789386	.	ATTTTATTTTATTTT	.	.	.	END=9789400;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999417:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.853:326.675,113.385:0.0,0.0:0.0,0.000427715,0.999575
-chr1	9796569	.	ACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9796608;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.851358:20,20:19-20,19-20:17,12,0,9:19,5|20,12:8,3|10,1|12,1|14,1|16,1|17,2:268.039:326.675,113.385:0.478127,0.478127:1.68661e-13,0.148339,0.85174
-chr1	9798093	.	CCGCCCGCCCGCCCGCCCGC	.	.	.	END=9798112;RU=ccgc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:23,17,0,4:5,23:3,1|4,3:281.783:326.675,113.385:0.0,0.0:0.0,3.9344e-07,1.0
-chr1	9800381	.	TTTTATTTTATTTTA	.	.	.	END=9800395;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999938:3,3:3-3,3-3:17,8,0,3:3,17:2,3:164.191:326.675,113.385:0.0,0.0:0.0,2.82943e-05,0.999972
-chr1	9801889	.	TTCTTTCTTTCT	.	.	.	END=9801900;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.964687:3,3:3-3,3-3:8,2,0,0:3,8:NULL:48.5915:326.675,113.385:0.0,0.0:5.61729e-24,0.0150769,0.984957
-chr1	9803579	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=9803606;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.815792:14,15:14-14,14-15:17,6,0,4:14,13|15,4:8,2|10,1|12,1:173.844:326.675,113.385:0.0,0.498798:1.52138e-19,2.32917e-05,0.999979
-chr1	9804974	.	TTGTTTGTTTGTTTGT	.	.	.	END=9804989;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998613:4,4:4-4,4-4:13,4,0,0:4,13:NULL:89.6982:326.675,113.385:0.0,0.0:3.39e-43,0.000790602,0.999211
-chr1	9806598	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=9806615;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994489:6,6:6-6,6-6:11,6,0,0:6,11:NULL:99.6822:326.675,113.385:0.0,0.0:1.39924e-26,0.00350447,0.996504
-chr1	9806750	.	TTGTTGTTGTTG	.	.	.	END=9806761;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.996284:4,4:4-4,4-4:12,12,0,0:4,12:NULL:157.937:326.675,113.385:0.0,0.0:4.87992e-40,0.00240843,0.997601
-chr1	9806981	.	CGGGCGGGCGGGCGGG	.	.	.	END=9806996;RU=cggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.986559:4,4:4-4,4-4:10,12,0,0:4,10:NULL:147.084:326.675,113.385:0.0,0.0:1.26129e-31,0.00847134,0.991547
-chr1	9807678	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9807697;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:132.185:326.675,113.385:0.0,0.0:0.0,2.19567e-06,1.0
-chr1	9808179	.	TGTGTGTGTGTGTGTG	.	.	.	END=9808194;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999918:8,8:8-8,8-8:18,9,0,4:8,18:4,1|5,2|6,1:188.85:326.675,113.385:0.0990099,0.0990099:6.67356e-33,3.72853e-05,0.999964
-chr1	9808200	.	GAGAGAGAGAGA	.	.	.	END=9808211;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:24,10,0,0:6,24:NULL:186.575:326.675,113.385:0.0,0.0:0.0,6.11492e-07,1.0
-chr1	9808370	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	.	END=9808417;RU=tcca;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999744:12,12:7-12,7-12:16,6,0,5:12,16:2,1|6,1|8,1|9,1|11,1:163.278:326.675,113.385:2.13292,2.13292:2.5e-44,0.000172019,0.999828
-chr1	9808990	.	GTTGGTTGGTTG	.	.	.	END=9809001;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999972:3,3:3-3,3-3:17,12,0,4:3,17:2,4:202.829:326.675,113.385:0.0,0.0:0.0,1.99062e-05,0.99998
-chr1	9812671	.	ATTATATTATATTATATTATATTATATTATATTATATTAT	.	.	.	END=9812710;RU=attat;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.97688:8,8:8-10,8-10:9,3,0,3:8,9:4,1|6,1|8,1:89.9138:326.675,113.385:0.985733,0.985733:7.60617e-29,0.00642369,0.993594
-chr1	9818042	.	CTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=9818065;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.994984:12,12:11-12,11-12:18,14,0,6:11,2|12,16:5,2|6,1|7,1|8,1|11,1:258.777:326.675,113.385:0.19802,0.19802:1.30381e-19,0.0050082,0.995003
-chr1	9818295	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9818334;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.966917:20,20:19-20,19-20:15,8,0,12:19,3|20,12:5,3|6,1|8,2|9,2|14,3|15,1:238.437:326.675,113.385:0.311527,0.311527:1.02404e-11,0.0317838,0.968277
-chr1	9820226	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9820273;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.993385:24,24:21-25,21-25:15,10,0,9:24,15:5,1|7,1|8,1|10,1|11,2|13,1|16,1|20,1:235.877:326.675,113.385:0.561483,0.561483:3.0861e-17,0.000580728,0.999423
-chr1	9821837	.	ATTTATTTATTT	.	.	.	END=9821848;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:156.203:326.675,113.385:0.0,0.0:0.0,4.60405e-07,1.0
-chr1	9821849	.	TATGTATGTATG	.	.	.	END=9821860;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,8,0,3:3,19:2,3:172.917:326.675,113.385:0.0,0.0:0.0,6.31206e-06,0.999994
-chr1	9823285	.	TTCTTTCTTTCT	.	.	.	END=9823296;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,6,0,3:3,23:2,3:167.214:326.675,113.385:0.0,0.0:0.0,4.1974e-07,1.0
-chr1	9824948	.	TGTCTGTCTGTC	.	.	.	END=9824959;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,16,0,3:3,22:2,3:254.318:326.675,113.385:0.0,0.0:9.1404e-41,1.24183e-06,1.0
-chr1	9824960	.	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	.	.	.	END=9825019;RU=tcct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.886348:15,15:15-15,15-15:6,21,0,23:15,6:3,1|4,2|5,1|6,3|7,2|8,5|10,1|11,1|12,2|13,4|15,1:385.936:326.675,113.385:0.19802,0.19802:2.6076e-24,0.0454539,0.95462
-chr1	9825656	.	ACACACACACACACACACACACACACACACAC	.	.	.	END=9825687;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.929022:16,16:14-16,14-16:14,15,0,13:15,3|16,11:6,2|7,1|8,1|9,5|12,2|13,1|14,1:311.934:326.675,113.385:0.467134,0.467134:2.76491e-11,0.0697273,0.930367
-chr1	9827879	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=9827922;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.990326:11,11:10-11,10-11:10,10,0,13:11,10:3,1|4,1|5,2|6,3|7,1|8,1|9,3|10,1:226.932:326.675,113.385:0.486863,0.486863:3.51965e-21,0.00474081,0.995273
-chr1	9829194	.	CAAACAAACAAA	.	.	.	END=9829205;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:110.934:326.675,113.385:0.0,0.0:0.0,7.53979e-06,0.999994
-chr1	9830384	.	TGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9830407;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:8,8:8-9,8-9:21,13,0,7:8,21:4,1|5,2|6,1|7,3:258.526:326.675,113.385:0.236383,0.236383:0.0,2.35716e-06,1.0
-chr1	9830483	.	ATTTATTTATTTATTT	.	.	.	END=9830498;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,9,0,6:4,25:2,2|3,4:227.354:326.675,113.385:0.0,0.0:0.0,9.26518e-08,1.0
-chr1	9831159	.	CACACACACACACACACACACACACACACACACACACACACACACA	.	.	.	END=9831204;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.979102:23,23:21-23,21-23:10,12,0,17:23,10:5,3|8,1|9,1|11,2|14,2|15,2|16,1|18,1|20,2|21,1|22,1:293.713:326.675,113.385:0.374933,0.374933:2.1171e-11,0.00763937,0.992378
-chr1	9837956	.	AGAAAAGAAAAGAAA	.	.	.	END=9837970;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.123:326.675,113.385:0.0,0.0:0.0,3.63503e-06,1.0
-chr1	9838257	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9838310;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.304945:27,50:27-28,27-50:7,15,0,16:26,2|27,5:7,2|9,1|10,1|13,1|14,1|15,1|16,1|17,1|22,3|25,1|26,1|27,1|48,1:307.266:326.675,113.385:0.242928,10.4355:5.27967e-17,3.53169e-05,0.999964
-chr1	9839831	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9839872;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.679783:20,21:17-21,21-22:14,9,0,9:20,6|21,8:5,1|9,1|10,1|13,2|15,2|16,1|20,1:225.393:326.675,113.385:1.12139,0.433614:2.84722e-07,0.680048,0.319968
-chr1	9840939	.	GGCAGGCAGGCA	.	.	.	END=9840950;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,14,0,3:3,26:2,3:250.977:326.675,113.385:0.0,0.0:0.0,5.21674e-08,1.0
-chr1	9841455	.	ATTTATTTATTT	.	.	.	END=9841466;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:18,13,0,3:3,18:2,3:211.788:326.675,113.385:0.0,0.0:0.0,7.91138e-06,0.999994
-chr1	9844142	.	TTTGTTTTGTTTTGT	.	.	.	END=9844156;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999995:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.375:326.675,113.385:0.0,0.0:0.0,1.24004e-05,0.999987
-chr1	9845384	.	TTTGTTTGTTTGTTTG	.	.	.	END=9845399;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,13,0,4:4,22:3,4:234.074:326.675,113.385:0.0,0.0:0.0,8.18899e-07,1.0
-chr1	9849556	.	ATAAATAAATAA	.	.	.	END=9849567;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.533:326.675,113.385:0.0,0.0:0.0,2.51299e-06,1.0
-chr1	9852948	.	GTGTGTGTGTGT	.	.	.	END=9852959;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:52,20,0,7:6,52:4,1|5,5|6,1:443.199:326.675,113.385:0.0,0.0:0.0,6.31683e-16,1.0
-chr1	9853686	.	TGGGGGTGGGGGTGGGGG	.	.	.	END=9853703;RU=tggggg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999793:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.883:326.675,113.385:0.0,0.0:0.0,0.000124373,0.999879
-chr1	9854454	.	GGTGTGGGTGTGGGTGTG	.	.	.	END=9854471;RU=ggtgtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,16,0,2:3,28:2,2:277.364:326.675,113.385:0.0,0.0:0.0,2.70576e-08,1.0
-chr1	9855719	.	AAAACAAAACAAAAC	.	.	.	END=9855733;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:254.18:326.675,113.385:0.0,0.0:0.0,3.36552e-07,1.0
-chr1	9856153	.	TCTCTGTCTCTGTCTCTGTCTCTG	.	.	.	END=9856176;RU=tctctg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,11,0,2:4,22:2,1|3,1:200.712:326.675,113.385:0.0,0.0:0.0,1.50182e-06,1.0
-chr1	9856692	.	TTGGTTGGTTGG	.	.	.	END=9856703;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:242.701:326.675,113.385:0.0,0.0:0.0,3.8504e-06,1.0
-chr1	9861552	.	CACACACACACA	.	.	.	END=9861563;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999915:6,6:6-6,6-6:17,11,0,0:6,17:NULL:168.335:326.675,113.385:0.0,0.0:5.68e-43,5.40906e-05,0.999948
-chr1	9862138	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9862197;RU=tc;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.243131:30,37:30-37,30-39:2,8,0,12:30,2:5,2|8,2|15,1|21,1|23,1|24,1|26,1|27,1|31,1|36,1:182.082:326.675,113.385:1.48138,3.03113:6.09945e-17,0.00714323,0.992873
-chr1	9863057	.	GTTGTTGTTGTT	.	.	.	END=9863068;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:248.583:326.675,113.385:0.0,0.0:0.0,1.11874e-08,1.0
-chr1	9864594	.	CACACACACACACACACACACACACACACACACACACA	.	.	.	END=9864631;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.675596:19,19:18-19,18-19:14,11,0,12:18,4|19,10:7,3|8,1|11,1|12,2|13,1|15,1|18,2|19,1:265.578:326.675,113.385:0.484441,0.484441:1.43435e-18,0.32366,0.676349
-chr1	9867773	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9867818;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.323888:23,30:22-23,22-31:17,13,0,26:22,7|23,10:5,1|7,3|9,2|10,1|11,1|12,1|13,1|15,1|17,4|18,3|19,1|20,1|21,4|26,1|30,1:432.974:326.675,113.385:0.236383,3.65447:3.68409e-18,4.2178e-08,1.0
-chr1	9869113	.	AAACAAACAAAC	.	.	.	END=9869124;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,16,0,3:3,29:2,3:287.382:326.675,113.385:0.0,0.0:0.0,5.28486e-09,1.0
-chr1	9869920	.	TTATTTATTTAT	.	.	.	END=9869931;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:295.033:326.675,113.385:0.0,0.0:0.0,3.15431e-08,1.0
-chr1	9870260	.	AAAACAAAACAAAAC	.	.	.	END=9870274;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,19,0,2:3,26:2,2:291.141:326.675,113.385:0.0,0.0:0.0,3.40741e-08,1.0
-chr1	9871386	.	AAACAAACAAAC	.	.	.	END=9871397;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999928:3,3:3-3,3-3:17,14,0,0:3,17:NULL:191.988:326.675,113.385:0.0,0.0:0.0,5.03227e-05,0.999949
-chr1	9879082	.	TTAATTAATTAATTAA	.	.	.	END=9879097;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999416:4,4:2-4,2-4:14,11,0,2:4,14:2,2:168.38:326.675,113.385:0.838725,0.838725:0.0,0.000365613,0.999636
-chr1	9879249	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9879284;RU=ct;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.767584:17,18:16-18,16-18:5,8,0,4:17,2|18,3:5,1|12,1|13,1|18,1:129.478:326.675,113.385:0.680364,0.40047:3.97845e-11,0.813711,0.186351
-chr1	9879878	.	AAATAAATAAAT	.	.	.	END=9879889;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999676:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.7982:326.675,113.385:0.0,0.0:0.0,0.000170969,0.999833
-chr1	9881346	.	AAACAAACAAAC	.	.	.	END=9881357;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:169.089:326.675,113.385:0.0,0.0:0.0,5.3849e-06,0.999995
-chr1	9882998	.	AGAGAGAGAGAGAGAG	.	.	.	END=9883013;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999933:8,8:7-8,7-8:27,19,0,0:7,3|8,24:NULL:287.503:326.675,113.385:0.195027,0.195027:1.96e-43,6.88518e-05,0.999933
-chr1	9885007	.	AAATAAATAAAT	.	.	.	END=9885018;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:265.343:326.675,113.385:0.0,0.0:0.0,6.64981e-07,1.0
-chr1	9885057	.	AAGCAAGCAAGCAAGC	.	.	.	END=9885072;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:22,22,0,5:4,22:2,1|3,4:322.98:326.675,113.385:0.0,0.0:0.0,9.46111e-07,1.0
-chr1	9885469	.	AAACAAACAAACAAACAAAC	.	.	.	END=9885488;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999898:5,5:5-5,5-5:16,12,0,4:5,16:2,1|4,3:208.683:326.675,113.385:0.0,0.0:0.0,5.205e-05,0.999949
-chr1	9887284	.	GTGTGTGTGTGTGTGT	.	.	.	END=9887299;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:8,8:8-8,8-8:22,23,0,2:8,22:6,2:333.026:326.675,113.385:0.0,0.0:2.00117e-39,1.37359e-06,1.0
-chr1	9887485	.	AACAACAACAAC	.	.	.	END=9887496;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:224.506:326.675,113.385:0.0,0.0:0.0,2.42337e-07,1.0
-chr1	9890042	.	TTACTTACTTAC	.	.	.	END=9890053;RU=ttac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:258.912:326.675,113.385:0.0,0.0:0.0,1.2277e-08,1.0
-chr1	9892145	.	TGCTTGCTTGCT	.	.	.	END=9892156;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:222.228:326.675,113.385:0.0,0.0:0.0,1.95093e-08,1.0
-chr1	9893504	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9893541;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.297224:19,24:19-19,19-25:17,15,0,18:18,2|19,15:5,1|6,1|7,3|8,2|9,1|10,1|12,1|13,3|15,1|16,2|18,1|24,1:372.061:326.675,113.385:0.0,2.45313:2.49488e-16,1.29365e-05,0.999987
-chr1	9893935	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9893984;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.376588:25,27:22-25,22-28:4,22,0,12:25,4:11,2|12,1|14,2|15,1|17,2|18,1|21,1|22,1|27,1:312.196:326.675,113.385:0.5093,1.40594:2.97015e-12,0.000131841,0.999872
-chr1	9898438	.	GTATGTATGTAT	.	.	.	END=9898449;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,15,0,2:3,25:2,2:259.815:326.675,113.385:0.0,0.0:0.0,1.99488e-07,1.0
-chr1	9901685	.	TTTGTTTGTTTG	.	.	.	END=9901696;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:227.902:326.675,113.385:0.0,0.0:0.0,1.54881e-06,1.0
-chr1	9902992	.	CAGCCAGCCAGC	.	.	.	END=9903003;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.891041:3,3:3-3,3-3:7,11,0,0:3,7:NULL:128.4:326.675,113.385:0.0,0.0:4.43637e-22,0.0645661,0.935524
-chr1	9903318	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9903365;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.996071:24,25:24-25,24-25:16,16,0,18:23,2|24,9|25,5:5,2|6,1|7,1|8,1|9,4|11,1|13,1|14,2|16,1|19,1|20,1|21,1|22,1:377.873:326.675,113.385:0.195027,0.345543:1.73537e-16,5.01236e-05,0.999949
-chr1	9905688	.	TAAATAAATAAA	.	.	.	END=9905699;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999304:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.728:326.675,113.385:0.0,0.0:0.0,0.000467848,0.999537
-chr1	9908942	.	CTGTCTGTCTGT	.	.	.	END=9908953;RU=ctgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:254.86:326.675,113.385:0.0,0.0:0.0,9.79986e-06,0.999993
-chr1	9909330	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=9909349;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999776:4,4:4-4,4-4:15,4,0,4:4,15:2,2|3,2:126.019:326.675,113.385:0.0,0.0:2e-44,8.28355e-05,0.999918
-chr1	9909905	.	TGGTGGTGGTGGTGG	.	.	.	END=9909919;RU=tgg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:4,2:225.98:326.675,113.385:0.0,0.0:0.0,1.89249e-06,1.0
-chr1	9910263	.	ATGTATGTATGTATGTATGTATGTATGTATGT	.	.	.	END=9910294;RU=atgt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-9,8-9:22,22,0,11:8,22:2,1|3,1|4,4|5,1|7,4:372.409:326.675,113.385:0.169767,0.169767:0.0,1.6759e-06,1.0
-chr1	9911074	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9911103;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995963:15,15:14-16,14-16:23,16,0,9:13,2|14,3|15,18:6,1|9,2|11,2|12,1|13,1|14,2:331.675:326.675,113.385:0.430892,0.430892:3.29582e-21,0.00404109,0.995968
-chr1	9911501	.	TTGTTGTTGTTG	.	.	.	END=9911512;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999989:4,4:4-4,4-4:18,5,0,2:4,18:3,2:133.462:326.675,113.385:0.0,0.0:0.0,1.61308e-05,0.999986
-chr1	9913930	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=9913979;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.284415:25,25:12-25,12-25:6,20,0,11:24,2|25,4:5,1|9,2|11,3|12,1|13,1|16,2|21,1:300.186:326.675,113.385:5.37526,5.37526:0.00137437,0.683164,0.31548
-chr1	9914697	.	TTATTTATTTATTTATTTATTTATTTAT	.	.	.	END=9914724;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999825:7,7:7-7,7-7:16,4,0,0:7,16:NULL:106.409:326.675,113.385:0.0,0.0:1.23276e-40,0.000110242,0.999894
-chr1	9914909	.	TATTTATTTATT	.	.	.	END=9914920;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:237.639:326.675,113.385:0.0,0.0:0.0,2.51367e-06,1.0
-chr1	9916204	.	ACAAACAAACAAACAAACAAACAA	.	.	.	END=9916227;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:22,14,0,6:6,22:3,1|4,1|5,4:270.528:326.675,113.385:0.0,0.0:0.0,5.54593e-07,1.0
-chr1	9916809	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9916844;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.987027:18,18:17-19,17-19:14,9,0,3:17,2|18,12:7,1|9,1|15,1:173.626:326.675,113.385:0.329868,0.329868:9.77748e-14,0.0120442,0.987981
-chr1	9918705	.	ATTTATTTATTT	.	.	.	END=9918716;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:223.823:326.675,113.385:0.0,0.0:0.0,2.44769e-07,1.0
-chr1	9920939	.	CACCACCACCAC	.	.	.	END=9920950;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999758:4,4:4-4,4-4:15,8,0,2:4,15:3,2:148.712:326.675,113.385:0.0,0.0:0.0,0.000113113,0.999888
-chr1	9922186	.	GTTTGTTTGTTTGTTT	.	.	.	END=9922201;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,15,0,5:4,22:2,2|3,3:261.244:326.675,113.385:0.0,0.0:0.0,9.56311e-07,1.0
-chr1	9923740	.	AAACAAACAAAC	.	.	.	END=9923751;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:173.336:326.675,113.385:0.0,0.0:0.0,9.15984e-07,1.0
-chr1	9926111	.	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC	.	.	.	END=9926146;RU=tgcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:9,9:9-9,9-9:30,16,0,14:9,30:2,1|3,4|4,2|5,2|6,2|7,1|8,2:372.654:326.675,113.385:0.0,0.0:0.0,2.1782e-09,1.0
-chr1	9927265	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=9927298;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	1/0:0.938:16,17:16-18,17-17:23,16,0,6:16,7|17,14|18,2:6,1|10,1|11,1|14,2|15,1:321.003:326.675,113.385:0.589421,0.0:5.79561e-16,0.937993,0.0620969
-chr1	9928606	.	CAAACAAACAAACAAACAAACAAACAAACAAA	.	.	.	END=9928637;RU=caaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:19,16,0,12:8,19:2,1|3,2|5,4|6,1|7,4:310.491:326.675,113.385:0.0,0.0:7.54194e-38,6.13532e-06,0.999994
-chr1	9929327	.	ATTTATTTATTT	.	.	.	END=9929338;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:19,16,0,2:3,19:2,2:226.484:326.675,113.385:0.0,0.0:0.0,6.84549e-06,0.999994
-chr1	9931528	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9931551;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999892:12,12:12-12,12-12:25,20,0,8:11,3|12,22:6,3|8,2|9,1|10,2:355.594:326.675,113.385:0.0990099,0.0990099:4.0669e-29,0.000110906,0.999889
-chr1	9932293	.	CATGCATGCATG	.	.	.	END=9932304;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,3,0,0:3,24:NULL:123.691:326.675,113.385:0.0,0.0:0.0,3.65319e-07,1.0
-chr1	9932642	.	TTGTTGTTGTTG	.	.	.	END=9932653;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:36,13,0,2:4,36:3,2:276.95:326.675,113.385:0.0,0.0:0.0,6.98338e-11,1.0
-chr1	9932828	.	ATTTATTTATTT	.	.	.	END=9932839;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:30,23,0,4:3,30:2,4:361.396:326.675,113.385:0.0,0.0:0.0,6.78511e-09,1.0
-chr1	9934352	.	AATAAATAAATA	.	.	.	END=9934363;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:234.426:326.675,113.385:0.0,0.0:0.0,2.12861e-07,1.0
-chr1	9935825	.	AATAAATAAATA	.	.	.	END=9935836;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:168.481:326.675,113.385:0.0,0.0:0.0,6.61641e-06,0.999994
-chr1	9936450	.	CACACACACACACACACACA	.	.	.	END=9936469;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999835:10,10:10-10,10-10:25,10,0,10:9,2|10,23:5,1|7,3|8,1|9,5:282.769:326.675,113.385:0.0,0.0:2.73707e-27,0.000164869,0.999835
-chr1	9937602	.	AGACAGACAGAC	.	.	.	END=9937613;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:38,17,0,0:3,38:NULL:306.04:326.675,113.385:0.0,0.0:0.0,3.47401e-11,1.0
-chr1	9938474	.	ATTTATTTATTT	.	.	.	END=9938485;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:201.908:326.675,113.385:0.0,0.0:0.0,3.09853e-06,1.0
-chr1	9944919	.	AAAGAAAGAAAGAAAG	.	.	.	END=9944934;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998394:4,4:4-4,4-4:13,9,0,0:4,13:NULL:133.016:326.675,113.385:0.0,0.0:1.19106e-38,0.00113158,0.998875
-chr1	9945172	.	AAATAAATAAAT	.	.	.	END=9945183;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999466:3,3:3-3,3-3:14,9,0,0:3,14:NULL:135.122:326.675,113.385:0.0,0.0:1.65127e-37,0.000301198,0.999704
-chr1	9946807	.	ATTTATTTATTTATTT	.	.	.	END=9946822;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.997971:4,4:4-4,4-4:12,9,0,3:4,12:3,3:150.242:326.675,113.385:0.0,0.0:4.41124e-35,0.000867772,0.999135
-chr1	9947166	.	TCTCTCTCTCTC	.	.	.	END=9947177;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999224:6,6:6-6,6-6:14,10,0,0:6,14:NULL:147.189:326.675,113.385:0.0,0.0:9.76726e-31,0.000426219,0.999576
-chr1	9948124	.	ACACACACACACACACACACACACACACACACACACAC	.	.	.	END=9948161;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.71969:19,19:14-21,14-21:22,12,0,10:17,2|18,5|19,15:4,1|6,4|9,1|10,1|13,1|18,2:308.056:326.675,113.385:1.22324,1.22324:1.63252e-15,0.280307,0.719693
-chr1	9948680	.	GCTAGCTAGCTA	.	.	.	END=9948691;RU=gcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999737:3,3:3-3,3-3:15,10,0,2:3,15:2,2:164.22:326.675,113.385:0.0,0.0:0.0,0.000118598,0.999881
-chr1	9949344	.	GGAGGGAGGGAG	.	.	.	END=9949355;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99956:3,3:3-3,3-3:14,10,0,0:3,14:NULL:148.374:326.675,113.385:0.0,0.0:0.0,0.000285647,0.999719
-chr1	9949792	.	CACACACACACA	.	.	.	END=9949803;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.75241:6,6:6-7,6-7:16,16,0,0:6,14|7,2:NULL:225.665:326.675,113.385:0.472558,0.472558:5.09718e-31,0.000158717,0.999842
-chr1	9952017	.	AATTAATTAATTAATT	.	.	.	END=9952032;RU=aatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998082:4,4:4-4,4-4:13,11,0,0:4,13:NULL:147.239:326.675,113.385:0.0,0.0:8.69591e-40,0.00148927,0.998518
-chr1	9954129	.	AAATAAATAAATAAAT	.	.	.	END=9954144;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999958:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:176.546:326.675,113.385:0.0,0.0:0.0,2.22757e-05,0.999979
-chr1	9955647	.	AAAACAAAACAAAAC	.	.	.	END=9955661;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:23,21,0,0:3,23:NULL:298.006:326.675,113.385:0.0,0.0:0.0,2.53549e-06,1.0
-chr1	9956363	.	TGTGTGTGTGTG	.	.	.	END=9956374;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:5-6,5-6:24,8,0,2:6,24:5,2:186.469:326.675,113.385:0.169767,0.169767:0.0,2.89937e-07,1.0
-chr1	9956833	.	TTTCTTTCTTTC	.	.	.	END=9956844;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:23,11,0,0:3,23:NULL:194.583:326.675,113.385:0.0,0.0:0.0,8.88355e-07,1.0
-chr1	9958725	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=9958749;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:24,14,0,3:5,24:3,1|4,2:243.839:326.675,113.385:0.0,0.0:0.0,2.1328e-07,1.0
-chr1	9964154	.	CACACACACACA	.	.	.	END=9964165;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:23,17,0,0:6,23:NULL:241.746:326.675,113.385:0.0,0.0:1.526e-42,1.09676e-06,1.0
-chr1	9966035	.	TATTATTATTAT	.	.	.	END=9966046;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999974:4,4:4-4,4-4:18,10,0,0:4,18:NULL:156.766:326.675,113.385:0.0,0.0:0.0,3.35008e-05,0.99997
-chr1	9967640	.	CCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCG	.	.	.	END=9967671;RU=cccg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:8,8:8-8,8-8:27,33,0,9:8,27:4,2|5,4|6,1|7,2:505.436:326.675,113.385:0.0,0.0:0.0,1.28947e-07,1.0
-chr1	9969740	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=9969757;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:6,6:6-6,6-6:19,10,0,4:6,19:5,4:198.517:326.675,113.385:0.0990099,0.0990099:0.0,6.04175e-06,0.999994
-chr1	9970610	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT	.	.	END=9970627;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.362935:9,11:9-9,9-11:15,10,0,5:9,15:5,1|6,1|8,2|11,1:205.017:326.675,113.385:0.0,0.885129:1.01799e-27,4.71352e-08,1.0
-chr1	9971832	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=9971863;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.995512:8,8:8-8,8-8:11,11,0,10:8,11:3,1|4,3|5,1|6,3|7,2:221.554:326.675,113.385:0.0,0.0:1.77565e-31,0.00219471,0.997813
-chr1	9973536	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=9973555;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999501:10,10:10-11,10-11:29,14,0,8:10,26|11,3:4,2|5,1|6,1|7,2|8,1|9,1:318.327:326.675,113.385:0.236383,0.236383:1.51294e-36,3.1442e-08,1.0
-chr1	9974995	.	CCTCCCTCCCTCCCTCCCTCCCTCCCTC	.	.	.	END=9975022;RU=cctc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.946905:7,7:6-7,6-7:7,21,0,14:7,7:2,2|3,4|4,2|6,6:331.615:326.675,113.385:0.498798,0.498798:6.1531e-18,0.02783,0.972222
-chr1	9975875	.	AAACAAACAAAC	.	.	.	END=9975886;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,11,0,3:3,24:2,3:215.89:326.675,113.385:0.0,0.0:0.0,1.27547e-07,1.0
-chr1	9977198	.	TTTGTTTGTTTG	.	.	.	END=9977209;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:256.659:326.675,113.385:0.0,0.0:0.0,3.31841e-07,1.0
-chr1	9977219	.	TGTTTGTTTGTT	.	.	.	END=9977230;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:257.592:326.675,113.385:0.0,0.0:0.0,8.22526e-08,1.0
-chr1	9978977	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9979014;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/1:0.289981:19,29:19-19,19-32:16,16,0,21:19,16:5,4|7,2|8,2|9,1|10,1|11,3|12,1|13,1|14,1|15,1|17,2|20,1|29,1:399.795:326.675,113.385:0.0,4.91823:2.38919e-27,5.47478e-14,1.0
-chr1	9979016	.	AAAATAAAAATAAAAATA	.	.	.	END=9979033;RU=aaaata;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:31,15,0,2:3,31:2,2:269.157:326.675,113.385:0.0,0.0:0.0,1.91913e-09,1.0
-chr1	9980211	.	AAATAAATAAATAAAT	.	.	.	END=9980226;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:4,4:4-4,4-4:22,6,0,3:4,22:3,3:163.046:326.675,113.385:0.0,0.0:0.0,7.88772e-07,1.0
-chr1	9981579	.	AAATAAATAAAT	.	.	.	END=9981590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:174.335:326.675,113.385:0.0,0.0:0.0,3.34348e-06,1.0
-chr1	9982246	.	ACACACACACACACACACAC	.	.	.	END=9982265;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999953:10,10:9-10,9-10:33,12,0,5:9,5|10,26|11,2:5,1|7,2|8,1|9,1:306.31:326.675,113.385:0.242928,0.242928:7.60741e-36,3.70945e-05,0.999964
-chr1	9982521	.	TTGTTGTTGTTG	.	.	.	END=9982532;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:45,9,0,3:4,45:3,3:280.876:326.675,113.385:0.0,0.0:0.0,7.36941e-14,1.0
-chr1	9984525	.	GCAAGAGCAAGAGCAAGA	.	.	.	END=9984542;RU=gcaaga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:239.768:326.675,113.385:0.0,0.0:0.0,1.29823e-07,1.0
-chr1	9986540	.	TTGTTGTTGTTG	.	.	.	END=9986551;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:26,16,0,0:4,26:NULL:243.992:326.675,113.385:0.0,0.0:0.0,1.1716e-07,1.0
-chr1	9987209	.	AATAAATAAATAAATAAATAAATA	.	.	.	END=9987232;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99986:6,6:6-6,6-6:16,11,0,2:6,16:5,2:179.84:326.675,113.385:0.0,0.0:6.45e-43,7.34505e-05,0.999926
-chr1	9987535	.	CAAACAAACAAACAAA	.	.	.	END=9987550;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999911:4,4:4-4,4-4:16,14,0,5:4,16:3,5:226.155:326.675,113.385:0.0,0.0:0.0,4.04958e-05,0.999963
-chr1	9989590	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9989609;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:5,5:5-5,5-5:26,8,0,2:5,26:3,1|4,1:193.06:326.675,113.385:0.0,0.0:0.0,7.69892e-08,1.0
-chr1	9989921	.	TCATCATCATCA	.	.	.	END=9989932;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:1.0:4,4:4-4,4-4:43,17,0,2:4,43:3,2:346.1:326.675,113.385:0.0,0.0:0.0,4.68102e-13,1.0
-chr1	9990327	.	ACACACACACACACACACACACACACACACACAC	.	.	.	END=9990360;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.998586:17,17:16-17,16-17:19,17,0,17:16,3|17,16:4,1|7,1|8,4|9,1|10,4|12,1|13,2|14,1|16,1|17,1:373.085:326.675,113.385:0.21692,0.21692:6.86508e-27,0.0012838,0.998723
-chr1	9993008	.	AAATAAATAAAT	.	.	.	END=9993019;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999304:3,3:3-3,3-3:14,7,0,0:3,14:NULL:122.489:326.675,113.385:0.0,0.0:0.0,0.00039125,0.999613
-chr1	9996407	.	AATAAATAAATA	.	.	.	END=9996418;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999931:3,3:3-3,3-3:17,10,0,0:3,17:NULL:153.515:326.675,113.385:0.0,0.0:0.0,4.14139e-05,0.999962
-chr2	2	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.99925:9,9:9-9,9-9:14,15,0,8:9,14:3,2|5,2|6,1|8,3:257.71:326.675,113.385:0.0,0.0:5.53904e-32,0.000440525,0.999561
-chr2	10	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:0.999453:8,8:7-9,7-9:15,15,0,2:8,15:4,1|7,1:216.15:326.675,113.385:0.370196,0.370196:1.5076e-32,0.000343545,0.999659
diff --git a/trtools/mergeSTR/tests/mydir/test_MissingFieldWarningscurrent b/trtools/mergeSTR/tests/mydir/test_MissingFieldWarningscurrent
deleted file mode 120000
index 9da844e7..00000000
--- a/trtools/mergeSTR/tests/mydir/test_MissingFieldWarningscurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_MissingFieldWarnings0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0/test.vcf
deleted file mode 100644
index e3a3d4d8..00000000
--- a/trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0/test.vcf
+++ /dev/null
@@ -1,8009 +0,0 @@
-##fileformat=VCFv4.1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##source=PopSTR
-##contig=<ID=chr21,length=46709983>
-##INFO=<ID=Motif,Number=1,Type=String,Description="Microsatellite repeat motif">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth">
-##FORMAT=<ID=PL,Number=G,Type=Integer,Description="PHRED-scaled genotype likelihoods">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_popstr1:NA12878	test_file_popstr1:NA12891	test_file_popstr2:NA12892
-chr21	5020351	chr21:5020351:M	GGGGGGGCGGGGGGGGGG	<14>,<17>	.	.	Motif=G	GT:AD:DP:PL	0/2:5,0,11:17:152,197,255,0,90,44	1/2:1,11,6:18:255,84,131,255,0,255	0/0:14,0,0:15:0,44,255,44,255,255
-chr21	5024618	chr21:5024618:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:57,0,3	0/1:5,5:11:61,0,53	0/0:11,1:13:0,12,166
-chr21	5031126	chr21:5031126:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:51,9,0	1/1:0,4:4:66,12,0	0/0:3,0:3:0,9,50
-chr21	5040718	chr21:5040718:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,24:35:255,0,105	0/1:12,13:25:160,0,141	0/0:18,0:19:0,56,255
-chr21	5042862	chr21:5042862:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:116,0,106	0/1:11,6:17:56,0,145	0/0:14,0:16:0,46,255
-chr21	5051279	chr21:5051279:M	TCACTCACTCATTCATCCCACATTCACTCACTCA	<1.8>	.	.	Motif=TCAC	GT:AD:DP:PL	0/1:8,3:11:43,0,165	0/1:4,7:11:142,0,66	0/1:5,7:13:147,0,85
-chr21	5051299	chr21:5051299:M	CATTCACTCACTCATTCATTCATCCCACATTCACTCATTCATTCAT	<4.8>	.	.	Motif=CATT	GT:AD:DP:PL	0/0:2,0:2:0,6,52	0/1:6,3:9:76,0,130	0/1:3,1:4:22,0,67
-chr21	5058258	chr21:5058258:M	TTTTTTTGTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:86,0,12	0/1:6,6:12:68,0,69	0/0:5,0:5:0,15,89
-chr21	5067052	chr21:5067052:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:163,18,0	0/1:8,5:13:99,0,175	0/1:1,1:2:21,0,20
-chr21	5103483	chr21:5103483:M	AAAAAAAAAAAAAAAAAGAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:10:0,29,166	0/0:8,2:12:0,1,119	0/1:4,13:17:174,0,19
-chr21	5103759	chr21:5103759:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<24.5>,<25.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,11,5,0:17:255,68,36,141,0,152,255,72,198,255	2/3:0,1,5,3:9:207,144,125,47,33,23,82,52,0,67	1/1:2,12,0,0:14:169,7,0,175,41,227,208,42,255,255
-chr21	5124343	chr21:5124343:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:8:84,0,12	0/1:8,3:11:19,0,104	0/1:7,2:11:6,0,104
-chr21	5224724	chr21:5224724:M	AAACAAACAAA	<2.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:180,60:256:61,0,255	0/1:172,46:242:27,0,255	0/1:156,91:272:255,0,255
-chr21	5229746	chr21:5229746:M	TTGTTGTTGTTGTT	<4.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:64,30:101:0,1,130	0/1:34,37:82:82,0,20	0/0:59,12:80:0,28,167
-chr21	5230609	chr21:5230609:M	ACACACACACACACACACACACACACACACACAC	<15>,<20>,<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/2:15,0,14,5,7:45:255,255,255,0,190,200,26,236,139,255,100,255,131,255,255	1/4:6,9,0,2,12:30:255,255,255,255,255,255,111,72,255,255,39,0,244,242,223	0/3:27,0,13,17,7:67:255,255,255,152,255,255,0,255,255,255,142,255,255,255,255
-chr21	5230670	chr21:5230670:M	AAAAAAGAAAAAACAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:79,43:122:255,0,255	0/1:72,45:117:255,0,255	0/1:99,20:119:192,0,255
-chr21	5240627	chr21:5240627:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:13,21,20:63:255,32,137,136,0,102	1/2:6,11,26:52:255,124,153,110,0,39	1/2:13,26,35:77:255,128,231,140,0,66
-chr21	5242046	chr21:5242046:M	TCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCT	<12.5>,<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:1,33,6:45:255,44,50,255,0,255	1/2:0,16,11:33:255,95,225,255,0,255	1/2:3,31,7:66:255,19,81,255,0,255
-chr21	5242078	chr21:5242078:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,12:39:77,0,170	1/1:2,10:22:115,4,0	0/1:24,15:56:110,0,240
-chr21	5245137	chr21:5245137:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGT	<14>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,28:82:255,0,255	0/1:19,28:77:255,0,237	0/1:12,44:94:255,0,255
-chr21	5247825	chr21:5247825:M	TTTATTTATTT	<2.5>,<3.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:1,28,9:45:124,41,19,144,0,255	1/2:0,39,16:57:198,101,81,183,0,255	1/2:0,29,15:48:170,101,98,138,0,255
-chr21	5247833	chr21:5247833:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:11,57:76:255,86,0	1/1:7,35:52:255,65,0	1/1:8,80:90:255,154,0
-chr21	5260390	chr21:5260390:M	ATATATATATATATAT	<7>,<9>	.	.	Motif=AT	GT:AD:DP:PL	1/2:5,15,15:36:255,197,255,188,0,255	0/2:4,0,8:12:101,135,255,0,57,33	0/1:23,12,0:35:108,0,255,208,255,255
-chr21	5261573	chr21:5261573:M	TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTT	<16.5>,<17.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/2:0,0,5:16:67,22,68,0,11,16	1/1:0,0,0:5:0,0,0,0,0,0	1/2:0,9,2:30:211,4,92,48,0,46
-chr21	5296708	chr21:5296708:M	ATAATAATAATAATAATAA	<4.7>,<5.3>	.	.	Motif=ATA	GT:AD:DP:PL	1/2:0,4,20:24:255,255,255,84,0,16	1/1:0,4,0:4:116,12,0,96,12,87	2/2:0,3,43:46:255,255,255,134,72,0
-chr21	5327591	chr21:5327591:M	AGTGGAGTGGAGTGGAGTGGAGTTGATCAGAGTGCAGTGGAATTGAATGGAATGGACTGGAATGGAATAGAGTGGAGTGGAGGGGAGTGG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	1/1:0,3:3:36,8,0	0/1:1,3:4:25,0,14	1/1:1,9:10:83,2,0
-chr21	5329879	chr21:5329879:M	GAATGGAATGGAATGGAGTGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	1/1:0,101:101:255,255,0	1/1:0,89:89:255,247,0	1/1:1,106:107:255,255,0
-chr21	5329940	chr21:5329940:M	AATGGAGTGGAATGGAAT	<27>	.	.	Motif=AATGG	GT:AD:DP:PL	0/1:17,101:118:255,0,130	0/1:17,89:106:255,0,167	0/1:17,105:122:255,0,119
-chr21	5329969	chr21:5329969:M	GAGTGGACTGGAGTGGAGTGGAGTTTAGTGGAGTG	<27>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:13,20:33:153,0,247	0/1:4,19:23:169,0,40	0/1:14,26:40:208,0,254
-chr21	5334486	chr21:5334486:M	TTTTTTTTTGTTTGTTTGTTTGTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	.	0/0:1,0:1:0,3,18	1/1:0,17:17:255,50,0
-chr21	5370146	chr21:5370146:M	AAATAATAAATAAATAAATAAATAAA	<7.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:8,1:12:0,19,139	0/1:0,3:6:26,0,20	0/0:9,0:9:0,26,130
-chr21	5448587	chr21:5448587:M	TTTTTTTTTTTTT	<12>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,5,8:24:159,138,224,0,63,255	0/1:17,13,3:33:78,0,129,94,142,255	1/2:9,13,7:29:160,58,111,50,0,255
-chr21	5505757	chr21:5505757:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,2:11:3,0,125	0/1:14,4:18:15,0,181	1/1:0,4:4:69,12,0
-chr21	5511978	chr21:5511978:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,1,3:7:132,92,101,46,0,32	1/2:1,3,1:7:106,33,63,60,0,69	1/2:0,0,5:8:144,124,143,32,0,14
-chr21	5515734	chr21:5515734:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,17:24:248,2,0	0/1:10,8:19:83,0,106	1/1:0,21:22:255,64,0
-chr21	5520202	chr21:5520202:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:2,1:3:2,0,12	0/1:6,3:11:1,0,46	.
-chr21	5520833	chr21:5520833:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,4,0:7:47,8,0,67,20,153	1/2:2,3,4:10:57,51,78,10,0,69	1/1:0,5,0:6:47,13,0,62,15,133
-chr21	5534983	chr21:5534983:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,1:1:5,2,0	0/0:5,2:7:0,3,14	1/1:0,3:3:14,5,0
-chr21	5535008	chr21:5535008:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:87,9,0	0/1:5,4:9:87,0,119	0/1:1,1:3:32,0,21
-chr21	5536014	chr21:5536014:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11:12:220,33,0	1/1:0,9:11:178,27,0	1/1:0,28:29:255,86,0
-chr21	5550856	chr21:5550856:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:6:68,1,0	0/0:5,0:5:0,15,81	0/0:1,0:1:0,3,17
-chr21	5552200	chr21:5552200:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,18:20:255,20,0	0/1:2,2:5:29,0,36	1/1:0,24:25:255,57,0
-chr21	5552591	chr21:5552591:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,3:4:35,8,0	1/1:0,5:7:58,14,0	1/1:0,5:6:58,14,0
-chr21	5555313	chr21:5555313:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:6,11,13:34:130,5,112,9,0,12	0/1:20,7,3:32:32,0,255,27,153,136	0/1:3,17,3:29:210,0,72,114,44,119
-chr21	5557399	chr21:5557399:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:16:158,0,108	0/1:4,6:10:119,0,72	1/1:1,10:12:240,11,0
-chr21	5557715	chr21:5557715:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:21:78,0,255	0/0:14,1:15:0,18,255	0/1:7,6:15:131,0,151
-chr21	5562461	chr21:5562461:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:162,0,96	1/1:1,10:14:218,12,0	0/1:2,10:12:196,0,11
-chr21	5563477	chr21:5563477:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:13,4:18:64,0,255	0/1:13,3:16:31,0,255	0/1:7,6:15:107,0,154
-chr21	5563948	chr21:5563948:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:5:38,0,65	0/1:2,1:6:81,0,49	0/1:2,3:6:91,0,38
-chr21	5564112	chr21:5564112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,10:21:93,0,108	0/1:13,6:20:43,0,135	1/1:3,15:19:191,9,0
-chr21	5580885	chr21:5580885:M	TCTCTCTCTTTCTTTCTTTCCTTCTCTCTCTCT	<4.5>,<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/2:5,0,3:8:57,35,159,0,132,124	0/2:13,1,3:17:83,23,255,0,255,255	1/1:0,4,1:5:215,15,0,51,2,36
-chr21	5582877	chr21:5582877:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,3:3:88,9,0	0/1:0,3:5:74,0,4	1/1:0,1:1:30,3,0
-chr21	5589529	chr21:5589529:M	AAAAGAAAAACAAAAA	<2.8>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:19,0:19:0,53,252	0/1:16,8:24:39,0,145	0/0:15,2:17:0,21,172
-chr21	5592304	chr21:5592304:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:18:38,0,58	0/0:7,0:13:0,26,145	0/1:0,6:10:73,0,17
-chr21	5598766	chr21:5598766:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,12:33:81,0,197	0/0:26,5:31:0,18,255	0/1:21,14:39:90,0,234
-chr21	5613671	chr21:5613671:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	0/1:2,6:19:81,0,11	0/1:4,6:14:73,0,9	1/1:0,10:16:96,1,0
-chr21	5614254	chr21:5614254:M	AGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:13,3:16:27,0,255	0/0:15,0:16:0,31,255	0/1:6,3:10:46,0,126
-chr21	5624629	chr21:5624629:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,9:17:200,0,52	0/1:4,5:13:140,0,43	0/1:6,14:20:234,0,63
-chr21	5625184	chr21:5625184:M	ATTTATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:21,1:22:0,47,194	0/0:21,6:27:0,12,143	0/1:17,9:26:20,0,97
-chr21	5687702	chr21:5687702:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,13:30:255,0,118	0/1:11,15:27:252,0,144	0/1:9,9:18:140,0,132
-chr21	5688257	chr21:5688257:M	ATTTATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:16,5:21:0,6,106	0/0:17,5:22:0,9,114	0/1:20,8:28:5,0,120
-chr21	5693908	chr21:5693908:M	ATTTATTTATTT	<2.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:7,7:16:31,0,16	0/1:7,8:16:31,0,16	1/1:1,11:12:76,20,0
-chr21	5698851	chr21:5698851:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:41:0,66,255	0/1:16,7:27:25,0,128	0/0:30,10:47:0,5,255
-chr21	5711871	chr21:5711871:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,4:4:124,12,0	1/1:0,4:4:119,12,0	1/1:0,4:4:123,12,0
-chr21	5717129	chr21:5717129:M	TTTTTTTTTTTTTTTTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,0,1:4:27,0,20,6,0,22	1/2:0,1,3:5:102,66,65,37,0,27	1/2:0,5,2:9:187,47,30,134,0,125
-chr21	5738430	chr21:5738430:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,2:9:0,4,36	0/0:8,0:13:0,28,96	1/1:0,4:7:41,12,0
-chr21	5745954	chr21:5745954:M	CACACACACACACACACACACACACAC	<14.5>,<15.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:19,2,0:21:0,34,207,57,255,255	0/0:15,4,0:19:0,4,131,45,182,255	1/2:2,5,3:10:77,12,9,24,0,55
-chr21	5757052	chr21:5757052:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,5:25:0,11,166	0/1:7,12:22:73,0,48	0/1:16,7:23:16,0,115
-chr21	5758152	chr21:5758152:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/1:31,10:41:28,0,255	0/0:34,1:35:0,85,255	0/1:31,11:42:37,0,255
-chr21	5762970	chr21:5762970:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,6:18:19,0,86	0/0:19,1:20:0,43,199	0/1:22,8:30:9,0,165
-chr21	5772988	chr21:5772988:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:2,8:11:82,1,0	1/1:3,12:15:119,2,0	1/1:0,17:17:229,48,0
-chr21	5774011	chr21:5774011:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:127,0,91	0/1:8,12:20:147,0,78	0/1:6,15:21:203,0,44
-chr21	5784132	chr21:5784132:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:7:7,0,36	0/0:6,0:7:0,8,63	0/1:6,3:9:13,0,51
-chr21	5790769	chr21:5790769:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,68,255	0/1:9,5:14:42,0,109	0/0:23,2:25:0,39,255
-chr21	5794367	chr21:5794367:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,13:45:80,0,255	0/1:17,16:38:172,0,176	0/0:30,3:33:0,48,255
-chr21	5859014	chr21:5859014:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,1:15:0,26,98,16,76,77	0/1:2,3,0:5:12,0,4,24,13,53	0/2:6,0,3:11:1,16,65,0,29,33
-chr21	5866538	chr21:5866538:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:13,4:17:1,0,110	0/0:17,2:21:0,33,198	0/1:3,4:9:44,0,12
-chr21	5877636	chr21:5877636:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,3:15:0,7,100	0/1:7,7:16:34,0,53	0/1:16,6:22:7,0,117
-chr21	5878736	chr21:5878736:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/1:21,9:30:44,0,218	0/0:33,3:36:0,60,255	0/1:24,12:36:69,0,240
-chr21	5881133	chr21:5881133:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:2,4:6:32,0,8	0/1:3,1:4:1,0,25	.
-chr21	5883554	chr21:5883554:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:13:22,0,56	0/0:28,4:34:0,47,255	0/1:22,10:33:24,0,169
-chr21	5893572	chr21:5893572:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:2,15:17:176,21,0	1/1:2,14:17:158,19,0	1/1:0,14:14:187,39,0
-chr21	5894595	chr21:5894595:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:13:33,0,115	0/1:6,12:18:152,0,49	0/1:6,9:16:119,0,59
-chr21	5904716	chr21:5904716:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,25,113	0/0:5,0:5:0,14,62	0/1:8,4:13:14,0,76
-chr21	5910071	chr21:5910071:M	GGGAGGGGGGAGGGA	<3.5>	.	.	Motif=GGGA	GT:AD:DP:PL	0/0:19,2:21:0,10,255	0/1:8,3:11:43,0,171	0/0:17,0:17:0,51,255
-chr21	5914951	chr21:5914951:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,10,0:33:68,0,255,135,255,255	0/2:12,9,9:31:187,22,124,0,68,255	0/0:40,0,0:41:0,119,255,123,255,255
-chr21	5972367	chr21:5972367:M	TTTTGTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,29,180	0/0:3,0:5:0,14,74	0/1:5,3:8:29,0,64
-chr21	5980542	chr21:5980542:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,11:12:185,17,0	0/1:2,12:16:163,0,11	1/1:1,8:9:127,8,0
-chr21	5981384	chr21:5981384:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:7:34,0,52	0/1:6,1:9:3,0,89	0/0:9,1:13:0,5,140
-chr21	5983797	chr21:5983797:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4,0:10:85,0,115,70,132,199	0/1:1,2,1:5:55,0,16,18,12,44	0/2:2,0,3:5:69,49,92,0,52,45
-chr21	5990439	chr21:5990439:M	TTTTTTTTTTTGTTGTTGTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:17:119,0,91	0/1:6,13:19:174,0,50	0/1:9,3:12:20,0,129
-chr21	5990535	chr21:5990535:M	TTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:15:156,0,174	0/1:3,0:5:13,0,86	0/0:7,0:9:0,9,189
-chr21	5996445	chr21:5996445:M	TTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,6:14:255,111,133,160,0,135	0/1:4,10,2:17:253,0,86,230,33,255	1/2:0,12,3:18:255,60,40,255,0,255
-chr21	6005386	chr21:6005386:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:9,9:18:124,0,121	0/1:9,8:17:98,0,113	0/1:7,14:21:207,0,70
-chr21	6020382	chr21:6020382:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGTGTGTG	<21>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,3:3:95,9,0	0/1:4,5:9:131,0,86	0/1:4,3:8:72,0,102
-chr21	6040905	chr21:6040905:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:26:203,0,128	0/1:10,6:17:65,0,127	0/1:12,10:23:115,0,161
-chr21	6070033	chr21:6070033:M	TGTGTGTGAGGTGTGTGGTGTGTGTG	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,14:33:71,0,255	0/1:30,12:42:19,0,255	0/1:26,16:42:68,0,255
-chr21	6070105	chr21:6070105:M	TGTGTGTGTAGTGTATGTGGTTGTGTG	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,14:36:66,0,255	0/1:27,12:39:31,0,255	0/1:30,16:46:60,0,255
-chr21	6071721	chr21:6071721:M	GGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/1:1,3:4:40,0,5	1/1:0,1:1:17,3,0	1/1:0,3:3:51,9,0
-chr21	6072175	chr21:6072175:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:10:42,0,78	0/0:2,0:2:0,6,34	1/1:0,1:1:18,3,0
-chr21	6073138	chr21:6073138:M	CCCCCCCACCCCCCCCC	<16>,<18>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,16,0:16:216,45,0,255,48,255	1/2:0,3,1:4:41,12,12,38,0,61	1/2:0,3,3:6:62,39,55,39,0,56
-chr21	6075369	chr21:6075369:M	TTTTTTTTTTAGTTTTTTAGTTTTTGTTTTTTTTGCTTTTTTTTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:7:33,0,52	0/0:4,0:4:0,12,69	0/1:1,1:2:12,0,12
-chr21	6097940	chr21:6097940:M	CACACACACACACACACACACACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:28:0,82,255	0/1:16,8:26:62,0,220	0/0:31,1:33:0,79,255
-chr21	6100222	chr21:6100222:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,13,7:21:255,105,63,177,0,180	0/2:22,1,6:31:93,94,255,0,255,255	1/1:2,18,3:23:255,32,0,242,15,255
-chr21	6109896	chr21:6109896:M	GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<27>,<29>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,5,4:10:255,255,255,108,108,88,143,142,0,128	1/2:0,3,4,0:9:211,130,120,81,0,66,209,127,84,209	3/3:0,0,0,6:6:184,184,184,179,179,175,18,18,18,0
-chr21	6132994	chr21:6132994:M	ATATATATATATATATATATATATATA	<12.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:2,0,5:8:137,143,168,0,31,35	1/2:0,6,1:7:97,23,6,90,0,156	0/0:9,0,0:10:0,29,151,30,178,255
-chr21	6222189	chr21:6222189:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,7:38:0,6,255	0/0:35,0:36:0,102,255	0/1:15,14:30:116,0,142
-chr21	6228654	chr21:6228654:M	TTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:8:68,0,52	0/0:4,0:5:0,12,107	0/1:4,2:18:46,0,159
-chr21	6240057	chr21:6240057:M	AGAGAGAGAGAAGGAAAGAAAGAAAGAGAGAGA	<5.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:4,0:5:0,3,94	0/1:9,4:13:111,0,244	.
-chr21	6256852	chr21:6256852:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,17:26:233,0,64	0/1:6,5:11:51,0,68	0/1:17,22:41:255,0,182
-chr21	6257009	chr21:6257009:M	AAAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,4:15:81,58,255,0,220,202	0/1:5,6,0:11:181,0,105,72,120,175	0/2:8,0,5:14:96,60,255,0,208,193
-chr21	6257055	chr21:6257055:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,21:23:255,18,0	1/1:0,5:5:140,15,0	0/1:16,25:46:255,0,255
-chr21	6257476	chr21:6257476:M	ACAACAACAACAACAACAACA	<10>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:5,4:10:86,0,97	0/1:12,2:15:10,0,255	0/1:3,2:9:61,0,59
-chr21	6258497	chr21:6258497:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,12:17:231,0,48	0/1:3,6:10:123,0,41	1/1:0,14:14:255,42,0
-chr21	6263230	chr21:6263230:M	CTGAAACTGAAA	<2.2>	.	.	Motif=CTGAAA	GT:AD:DP:PL	0/1:16,11:28:53,0,104	0/0:16,3:20:0,19,150	0/1:12,11:24:66,0,70
-chr21	6263239	chr21:6263239:M	AAAAGAAAAAAACAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,9:27:252,0,255	0/1:17,2:21:3,0,255	0/1:8,8:16:238,0,190
-chr21	6263552	chr21:6263552:M	TTTTTTTTTTTATTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:13:151,0,78	0/1:3,4:8:94,0,53	0/1:3,6:12:151,0,41
-chr21	6265649	chr21:6265649:M	AAAAAAAAAAAA	<10>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12,9:38:117,0,215,130,17,255	0/0:25,5,2:42:0,9,255,85,218,255	1/2:2,16,13:36:255,81,237,236,0,255
-chr21	6266473	chr21:6266473:M	AAAAAAAAAAAAACAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,8,7:22:247,17,54,35,0,39	0/2:16,1,7:31:84,26,255,0,255,240	0/1:5,7,9:23:232,0,66,1,0,30
-chr21	6268291	chr21:6268291:M	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTCCTTCTTC	<22.7>	.	.	Motif=TCT	GT:AD:DP:PL	1/1:0,3:5:90,9,0	1/1:0,2:5:106,12,0	0/0:0,0:1:0,0,0
-chr21	6268762	chr21:6268762:M	TGTGTGTGTGTG	<7>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,23:23:255,63,0	1/1:0,1:1:11,3,0	1/1:2,24:27:244,39,0
-chr21	6270105	chr21:6270105:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:72,14,0	0/1:3,2:5:14,0,28	0/0:1,0:1:0,3,14
-chr21	6284922	chr21:6284922:M	TGTGTGTGTGTGTGTGTGTGTGTGGTGTGTTTGTGTGT	<17>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,14:14:255,42,0	0/1:5,8:14:130,0,57	1/1:0,23:23:255,68,0
-chr21	6299706	chr21:6299706:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:3,1:5:9,0,29	0/1:4,5:14:67,0,26	.
-chr21	6299731	chr21:6299731:M	TTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3,0:10:13,0,27,31,49,149	0/2:3,1,3:7:55,42,54,0,19,64	0/0:2,0,0:2:0,5,19,6,25,49
-chr21	6300103	chr21:6300103:M	AAAAAAAAAAAAAAGAAAAAGAAAAGAAAAGAAAAAAA	<37>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4,0:6:23,0,4,40,21,125	1/2:3,5,5:14:90,76,114,19,0,115	1/1:0,3,0:5:28,8,0,37,9,78
-chr21	6300733	chr21:6300733:M	CACACACAAACACATCACACACACACACACACACACACA	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:4,0:4:0,10,37	0/1:5,3:8:7,0,26	.
-chr21	6305211	chr21:6305211:M	TTTTTTTTCTTTTTTCTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:17:196,15,0	0/1:4,9:13:107,0,26	1/1:0,20:20:255,58,0
-chr21	6308951	chr21:6308951:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,3:8:142,74,107,80,0,65	0/1:0,2,0:3:51,0,12,54,15,67	1/2:0,0,2:4:49,44,70,12,0,3
-chr21	6315192	chr21:6315192:M	ACACACACACAGACAGACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,5:9:54,0,38	0/1:18,5:23:11,0,211	1/1:0,3:3:47,9,0
-chr21	6320083	chr21:6320083:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,7:36:21,0,255	0/0:19,1:20:0,41,255	0/1:19,9:28:74,0,250
-chr21	6325896	chr21:6325896:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:200,23,0	0/1:19,4:24:6,0,243	0/1:14,4:18:15,0,184
-chr21	6334410	chr21:6334410:M	TTGTTGTATGTTGTTTTATTGTTGCTTTTATTGATGTATGTTGTTTTTTGTTGCTTTTATTGTTGTTGTT	<13.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:5,4:11:91,0,102	0/1:9,2:20:26,0,201	0/1:4,1:7:14,0,89
-chr21	6335235	chr21:6335235:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:19:59,0,97	0/1:13,5:21:10,0,152	0/0:6,0:6:0,17,84
-chr21	6337885	chr21:6337885:M	AAAAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,9,7:27:123,66,137,0,12,255	0/1:20,18,2:43:125,0,139,194,205,255	0/2:14,13,7:36:111,33,137,0,12,255
-chr21	6351126	chr21:6351126:M	AAAATAAAATAAA	<2.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:34,6:40:0,40,255	0/0:37,5:42:0,57,255	0/1:31,16:47:55,0,226
-chr21	6352933	chr21:6352933:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/1:15,16:31:177,0,161	0/1:17,8:25:56,0,200	0/0:19,3:22:0,15,255
-chr21	6356407	chr21:6356407:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:12:218,39,9,169,0,158	1/2:0,1,0:4:62,31,28,29,0,22	1/2:0,2,3:10:202,85,67,109,0,93
-chr21	6371108	chr21:6371108:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>,<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,4,3:23:255,57,46,188,0,132,255,14,163,255	2/3:5,1,3,10:30:115,57,255,16,90,57,28,11,0,13	1/2:3,9,7,1:28:255,43,91,130,0,110,250,22,135,227
-chr21	6374684	chr21:6374684:M	AAAAAAAAAAAAAAGAAAAGAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:70,6:84:0,94,255	0/1:41,17:68:93,0,255	0/0:82,3:93:0,216,255
-chr21	6376674	chr21:6376674:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,116:144:255,255,0	1/1:2,75:138:255,255,0	1/1:0,113:113:255,255,0
-chr21	6441721	chr21:6441721:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:40,0,22	0/1:3,5:8:63,0,28	0/1:2,0:3:1,0,27
-chr21	6444559	chr21:6444559:M	AAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,15:17:255,0,9	0/1:2,12:16:255,0,12	0/0:2,0:4:0,9,73
-chr21	6445451	chr21:6445451:M	GCCAGGCCAGGC	<1.4>	.	.	Motif=GCCAG	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:21,0:21:0,62,255	0/1:10,8:18:97,0,135
-chr21	6452919	chr21:6452919:M	TTTTCTTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:17:147,0,62	0/1:3,8:12:109,0,20	0/0:12,0:12:0,35,217
-chr21	6480511	chr21:6480511:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,72	.	0/1:5,3:10:25,0,76
-chr21	6523931	chr21:6523931:M	AAGAAGAAGAAGAAGAAGAA	<8.7>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:13,9:27:140,0,255	0/1:2,14:18:255,0,15	0/0:17,0:18:0,51,255
-chr21	6544947	chr21:6544947:M	TTTTTCGTTTTTGTTTTTGTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:2,2:4:24,0,24	0/0:11,0:11:0,32,198	0/1:4,6:10:78,0,43
-chr21	6559518	chr21:6559518:M	AATAATAATAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:9,0:9:0,27,253	0/0:8,0:8:0,24,225	0/1:11,12:23:255,0,241
-chr21	6572511	chr21:6572511:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/1:6,3:9:29,0,83	0/0:20,0:20:0,59,255
-chr21	6572679	chr21:6572679:M	TGTGTGTGTGTGTGTGGGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:14,2:16:0,7,231	0/0:11,0:11:0,32,200	1/1:0,7:7:135,21,0
-chr21	6576800	chr21:6576800:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:17:115,0,96	0/0:11,0:11:0,32,192	1/1:1,20:21:255,44,0
-chr21	6632687	chr21:6632687:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5,0:8:185,21,0,174,17,168	1/2:0,3,1:6:107,27,17,78,0,73	1/2:0,3,3:12:252,144,126,93,0,67
-chr21	6637988	chr21:6637988:M	TTTATTTTATTTT	<2.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/0:40,4:44:0,73,255	0/0:33,4:38:0,55,255	0/1:29,14:44:48,0,239
-chr21	6651229	chr21:6651229:M	TTTTTTTTTTTTT	<12>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,5,6:18:111,70,115,0,4,195	0/1:16,14,1:32:92,0,129,159,192,255	1/2:10,15,7:34:184,62,124,64,0,255
-chr21	6653878	chr21:6653878:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:19:31,0,111	0/1:16,6:23:21,0,154	0/0:6,0:6:0,17,83
-chr21	6654647	chr21:6654647:M	AACAACAACAATAAAAGCAACAAAAAACAACATACATCAATAAAAGCAACAATAAAACAACATACAACAA	<13.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:7,7:18:143,0,141	0/1:17,12:36:228,0,255	1/1:1,10:14:239,7,0
-chr21	6660338	chr21:6660338:M	TTTTTTTATTTTATTTTATTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,2:18:0,5,255	0/0:20,1:25:0,38,255	0/1:8,4:12:62,0,148
-chr21	6663216	chr21:6663216:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:166,29,0	0/1:11,5:16:36,0,135	0/1:11,3:15:10,0,146
-chr21	6664000	chr21:6664000:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,3:35:0,58,255	0/0:47,6:53:0,69,255	0/1:29,11:40:36,0,255
-chr21	6666585	chr21:6666585:M	AAAAAAAAAAAAAACAAAAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,54,255	0/0:6,0:6:0,18,155	0/1:11,4:16:55,0,234
-chr21	6669849	chr21:6669849:M	AAAAAACAAAAAACAAACAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:65,0,231	0/1:11,4:15:62,0,251	0/0:5,0:7:0,18,149
-chr21	6673910	chr21:6673910:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,2:11:3,0,125	0/1:13,4:17:17,0,167	1/1:0,5:5:86,15,0
-chr21	6680131	chr21:6680131:M	ACACACACACACACACACACACACACACACACACACACACACACA	<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,5:7:127,18,0	0/1:3,0:7:12,0,50	1/1:0,4:8:107,15,0
-chr21	6683887	chr21:6683887:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<27>,<28>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,8:12:166,96,112,33,0,16	2/2:2,0,16:18:227,233,255,20,52,0	2/2:0,0,15:16:251,240,237,44,35,0
-chr21	6688355	chr21:6688355:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,3:4:20,0,0	0/1:2,1:5:15,0,7	.
-chr21	6688986	chr21:6688986:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,2:9:58,23,24,47,0,137	0/2:5,0,4:13:46,72,137,0,50,65	1/1:0,2,0:3:19,5,0,25,6,50
-chr21	6689379	chr21:6689379:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4,2:9:53,0,35,21,12,27	0/2:4,1,4:10:21,20,92,0,37,21	0/1:4,2,0:7:16,0,69,16,43,45
-chr21	6689395	chr21:6689395:M	AGAGAGAGAGAGAGGGAGAGAGAGAG	<12.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:4,0:9:0,1,83	0/1:4,4:13:56,0,71	0/1:0,0:4:3,0,4
-chr21	6703136	chr21:6703136:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:3,3:6:4,0,4	0/0:3,0:4:0,7,19	1/1:0,1:1:5,2,0
-chr21	6703161	chr21:6703161:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:133,15,0	0/1:4,2:6:36,0,91	0/1:1,1:2:22,0,21
-chr21	6704167	chr21:6704167:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,21:24:255,62,0	1/1:1,9:13:160,10,0	1/1:0,21:21:255,62,0
-chr21	6710597	chr21:6710597:M	AAAAGAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,4:6:118,48,31,23,0,6	1/1:0,0,0:1:18,3,0,13,3,11	1/1:0,3,0:3:84,9,0,44,8,35
-chr21	6720353	chr21:6720353:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,19:20:255,37,0	0/1:3,3:6:47,0,48	0/1:2,22:27:255,0,19
-chr21	6720744	chr21:6720744:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,5:9:58,14,0	1/1:0,4:8:47,11,0	1/1:0,3:4:35,8,0
-chr21	6723466	chr21:6723466:M	TTTTTTTTTTTT	<10>,<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,8,12,5:37:80,17,231,0,76,55,127,102,43,255	0/2:17,1,9,1:28:17,55,255,0,144,85,76,205,100,236	1/3:5,23,1,14:43:255,75,255,245,207,255,255,0,174,255
-chr21	6725552	chr21:6725552:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,9:15:218,0,34	0/1:4,4:10:80,0,89	0/1:4,5:11:116,0,71
-chr21	6725868	chr21:6725868:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,7:27:120,0,255	0/1:9,3:14:49,0,208	0/1:12,9:21:201,0,255
-chr21	6730614	chr21:6730614:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,18:23:255,0,29	0/1:10,6:17:84,0,182	1/1:0,23:24:255,72,0
-chr21	6732265	chr21:6732265:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,15:27:152,0,106	0/1:12,5:17:25,0,129	0/1:3,12:15:138,0,2
-chr21	6828166	chr21:6828166:M	ATGAAGAACTGAATGAATGAATGAATGAATGAATGAAT	<10.5>	.	.	Motif=ATGA	GT:AD:DP:PL	1/1:0,14:14:255,41,0	0/1:15,8:23:78,0,203	0/1:11,6:17:63,0,155
-chr21	6987408	chr21:6987408:M	TTTTTTTATTTTATTTTATTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,4:15:54,0,215	0/0:18,0:21:0,54,255	0/1:6,3:10:46,0,134
-chr21	6990286	chr21:6990286:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:13:121,0,17	0/0:20,4:24:0,4,255	0/1:5,5:10:56,0,56
-chr21	6991070	chr21:6991070:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,4:46:0,75,255	0/0:35,6:41:0,35,255	0/1:35,16:52:81,0,255
-chr21	6993655	chr21:6993655:M	AAAAAAAAAAAAAACAAAAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,51,255	0/0:13,0:14:0,39,255	0/1:8,5:14:97,0,166
-chr21	7000980	chr21:7000980:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,3:14:13,0,155	0/1:18,4:22:4,0,241	1/1:0,5:5:88,15,0
-chr21	7007201	chr21:7007201:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<16.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,5,0,3:13:223,73,91,154,108,174,139,0,81,143	0/1:3,4,0,0:8:110,0,61,68,75,130,119,62,130,175	2/3:1,0,3,3:11:150,131,186,90,153,145,55,41,0,54
-chr21	7010957	chr21:7010957:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:18:255,52,0	0/1:6,19:26:232,0,32	1/1:0,9:9:149,26,0
-chr21	7016056	chr21:7016056:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,5,2:8:50,22,23,38,0,111	0/2:3,1,5:11:71,76,111,0,9,47	1/1:0,3,0:3:28,8,0,37,9,75
-chr21	7016449	chr21:7016449:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:7:1,0,67	0/1:5,2:10:12,0,80	0/1:3,3:6:37,0,37
-chr21	7031236	chr21:7031236:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,13:16:255,39,0	0/1:2,10:12:162,0,4	1/1:0,19:19:255,56,0
-chr21	7046078	chr21:7046078:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:17,3,0	0/1:9,6:15:53,0,102	0/0:4,0:4:0,12,66
-chr21	7047422	chr21:7047422:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,17:17:255,51,0	0/0:2,0:4:0,11,64	1/1:0,29:30:255,71,0
-chr21	7047813	chr21:7047813:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,2:5:23,5,0	1/1:0,1:3:12,3,0	1/1:0,7:7:82,19,0
-chr21	7050535	chr21:7050535:M	TTTTTTTTTTTT	<10>,<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/3:7,15,5,10:37:177,15,205,98,112,152,180,0,70,255	0/2:14,1,9,5:29:14,56,255,0,152,90,42,148,50,173	1/3:4,16,4,13:37:241,67,249,163,168,216,219,0,93,255
-chr21	7052621	chr21:7052621:M	AAAAAAAAAAATAAAAAAAAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,5:9:151,36,30,14,0,15	0/2:3,0,5:9:111,52,93,0,60,61	0/2:2,2,7:11:174,53,62,0,15,21
-chr21	7052937	chr21:7052937:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,7:25:122,0,255	0/0:19,2:21:0,6,255	0/1:8,9:19:196,0,166
-chr21	7057683	chr21:7057683:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,9:12:176,0,34	0/1:2,7:9:129,0,20	1/1:1,11:13:231,12,0
-chr21	7058699	chr21:7058699:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:6,5:11:96,0,120	0/0:16,1:18:0,23,255	0/1:4,2:9:40,0,96
-chr21	7059170	chr21:7059170:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:12:158,0,103	0/1:5,0:6:14,0,126	0/1:1,3:5:75,0,30
-chr21	7059334	chr21:7059334:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,16:29:162,0,116	0/1:12,3:15:1,0,135	0/1:5,10:15:108,0,33
-chr21	7078099	chr21:7078099:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:2,3:6:71,0,44	0/1:1,3:5:78,0,17	1/1:0,1:1:31,3,0
-chr21	7084755	chr21:7084755:M	AAAAGAAAAACAAAAA	<2.8>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:17,2:19:0,29,174	0/1:13,5:18:9,0,102	0/0:19,4:23:0,16,174
-chr21	7087530	chr21:7087530:M	AAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,1,0:7:0,1,58,6,24,33	0/0:3,0,0:5:0,9,49,6,31,23	1/2:3,4,4:15:52,24,119,34,0,57
-chr21	7093992	chr21:7093992:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,5:27:0,5,248	0/0:29,2:31:0,60,255	0/1:14,10:25:73,0,141
-chr21	7103609	chr21:7103609:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:15,6:22:13,0,132	0/0:15,0:15:0,41,178	0/0:17,4:24:0,14,170
-chr21	7108897	chr21:7108897:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>,<8.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	1/2:2,3,3:11:53,15,40,45,0,89	1/1:1,4,0:8:55,7,0,72,18,119	1/1:0,9,1:10:95,17,0,110,8,178
-chr21	7119855	chr21:7119855:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,9:15:185,0,38	0/1:6,6:14:130,0,80	0/1:4,12:16:209,0,34
-chr21	7126061	chr21:7126061:M	ATTTATTTATTT	<2.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:9,4:14:9,0,34	0/1:9,7:16:16,0,30	1/1:6,14:22:68,4,0
-chr21	7134149	chr21:7134149:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,7:26:85,0,255	0/1:15,15:36:246,0,249	0/1:27,9:45:111,0,255
-chr21	7144022	chr21:7144022:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,7:7:204,21,0	1/1:0,1:1:32,3,0	1/1:0,5:5:149,15,0
-chr21	7149280	chr21:7149280:M	TTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,18	0/0:0,0:1:0,3,18	0/1:0,3:7:84,0,12
-chr21	7232451	chr21:7232451:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:31,8,0	0/1:1,1:2:5,0,5	0/1:2,2:6:19,0,6
-chr21	7234039	chr21:7234039:M	TTGTGTTGTGT	<1.8>	.	.	Motif=TTGTG	GT:AD:DP:PL	0/1:59,17:76:237,0,255	0/0:49,0:49:0,147,255	0/1:43,46:89:255,0,255
-chr21	7257612	chr21:7257612:M	AGTGGAGTGGAGTGGAGTGGAGTTGATCAGAGTGCAGTGGAATTGAATGGAATGGACTGGAATGGAATAGAGTGGAGTGGAGGGGAGTGG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	0/1:2,12:14:102,0,11	1/1:1,13:14:128,14,0	1/1:1,14:15:140,16,0
-chr21	7258025	chr21:7258025:M	GGAATGGAAATGAATGGAATGGAATGGAATG	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:40,340:461:255,0,255	0/1:27,375:508:255,0,255	0/1:46,431:542:255,0,255
-chr21	7261697	chr21:7261697:M	GAATGGAATGGAATGGAGTGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	0/1:62,168:230:255,0,255	0/1:29,177:206:255,0,209	0/1:68,228:296:255,0,255
-chr21	7261758	chr21:7261758:M	AATGGAGTGGAATGGAAT	<27>	.	.	Motif=AATGG	GT:AD:DP:PL	0/1:148,167:315:255,0,255	0/1:123,177:300:255,0,255	0/1:130,225:355:255,0,255
-chr21	7261787	chr21:7261787:M	GAGTGGACTGGAGTGGAGTGGAGTTTAGTGGAGTG	<27>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:39,29:68:161,0,255	0/1:28,27:55:175,0,255	0/1:37,49:86:255,0,255
-chr21	7301246	chr21:7301246:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:37,17:56:12,0,207	1/1:3,26:31:219,50,0	0/0:50,1:63:0,147,255
-chr21	7304153	chr21:7304153:M	AAATAATAAATAAATAAATAAATAAA	<6>,<7.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:18,7,8:42:0,38,220,15,134,255	1/2:0,5,10:18:99,95,148,30,0,65	0/0:43,6,0:60:0,83,255,160,255,255
-chr21	7318946	chr21:7318946:M	AATAATAATAAAATAAAATAAAATAAAATAAA	<7.6>	.	.	Motif=AATAA	GT:AD:DP:PL	0/1:25,16:41:153,0,255	0/1:15,13:29:140,0,169	0/0:37,5:45:0,35,255
-chr21	7382758	chr21:7382758:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,2:9:9,0,95	0/1:14,9:23:83,0,165	1/1:0,3:3:52,9,0
-chr21	7388979	chr21:7388979:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,2,3:7:135,94,98,48,0,33	0/1:5,4,0:11:92,0,124,109,108,205	2/2:0,0,6:6:128,140,168,18,18,0
-chr21	7392735	chr21:7392735:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,14:20:215,7,0	0/1:4,16:21:207,0,3	1/1:2,15:17:214,17,0
-chr21	7397203	chr21:7397203:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:7:11,0,20	0/1:3,5:9:33,0,5	0/0:0,0:1:0,2,9
-chr21	7397834	chr21:7397834:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:13,0,13	0/0:6,2:11:0,4,44	1/1:0,5:6:56,15,0
-chr21	7398227	chr21:7398227:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3,0:9:32,0,55,25,38,48	0/2:6,1,3:10:11,14,102,0,46,31	0/1:1,2,0:3:28,0,10,17,8,19
-chr21	7412009	chr21:7412009:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:79,9,0	0/1:2,3:6:65,0,40	.
-chr21	7413015	chr21:7413015:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:21:255,56,0	0/1:2,9:14:147,0,8	1/1:0,24:25:255,74,0
-chr21	7429200	chr21:7429200:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,7:7:156,21,0	0/1:3,4:7:67,0,45	1/1:0,27:28:255,76,0
-chr21	7429591	chr21:7429591:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<23.7>,<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/2:0,0,2:7:90,20,5,71,0,65	1/2:0,0,2:3:39,20,17,19,0,13	1/2:0,3,4:7:115,40,31,75,0,63
-chr21	7432313	chr21:7432313:M	TTTTTTTTTTTT	<10>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,15,3:29:183,0,78,225,36,255	0/0:22,4,4:33:0,21,255,46,171,207	1/2:1,19,14:37:255,102,238,255,0,255
-chr21	7434399	chr21:7434399:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:19:238,0,107	0/1:3,5:9:114,0,49	0/1:4,6:13:136,0,70
-chr21	7434715	chr21:7434715:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:25:219,0,255	0/1:20,3:23:16,0,255	0/1:5,4:15:105,0,101
-chr21	7439461	chr21:7439461:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,8:14:156,0,55	1/1:0,2:2:44,6,0	1/1:2,15:17:255,4,0
-chr21	7440477	chr21:7440477:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:9,3:13:51,0,189	0/0:9,1:11:0,2,200	0/1:6,7:16:147,0,127
-chr21	7440948	chr21:7440948:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:9:54,0,144	0/1:3,0:6:20,0,76	0/1:2,3:7:96,0,34
-chr21	7441112	chr21:7441112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,18:32:183,0,122	0/1:7,6:13:51,0,66	0/1:12,16:29:158,0,108
-chr21	7455244	chr21:7455244:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAAAAA	<53>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:28,9,0	1/1:0,1:3:7,2,0	1/1:0,2:3:14,4,0
-chr21	7457885	chr21:7457885:M	TCTCTCTCTTTCTTTCTTTCCTTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:4,1:6:48,0,108	0/1:5,2:8:76,0,191	1/1:0,3:3:82,9,0
-chr21	7458909	chr21:7458909:M	TTTATTTATCTGTTTATTTACTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:10,1:11:0,16,144	0/1:7,3:10:18,0,79	0/1:4,2:6:14,0,45
-chr21	7459877	chr21:7459877:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,1:1:26,3,0	1/1:0,1:1:26,3,0	1/1:0,4:4:95,12,0
-chr21	7469308	chr21:7469308:M	AAAAAAAAAAAAA	<11>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8,3:17:91,0,42,50,1,193	0/2:4,0,3:9:81,94,148,0,63,77	0/2:4,3,2:14:50,28,88,0,20,92
-chr21	7475770	chr21:7475770:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,7:29:19,0,237	0/1:16,6:22:22,0,163	0/1:17,25:46:228,0,157
-chr21	7485387	chr21:7485387:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	0/0:14,3:18:0,13,144	0/0:20,0:21:0,57,248	0/1:14,6:20:17,0,113
-chr21	7490675	chr21:7490675:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	0/1:4,8:14:70,0,12	0/1:4,6:10:43,0,19	1/1:0,9:13:127,25,0
-chr21	7551450	chr21:7551450:M	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<7>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:3,9:12:107,0,12	1/1:2,12:14:151,10,0	1/1:0,27:27:255,78,0
-chr21	7561497	chr21:7561497:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,6:24:3,0,138	0/0:19,3:22:0,26,177	0/0:19,6:26:0,3,156
-chr21	7563872	chr21:7563872:M	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTGTTTTATTTTATTTTA	<10.4>	.	.	Motif=TATTT	GT:AD:DP:PL	0/1:3,5:8:40,0,15	0/1:3,2:5:11,0,23	0/1:4,3:9:22,0,27
-chr21	7567415	chr21:7567415:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,9:23:38,0,93	0/1:13,7:21:21,0,96	0/1:16,10:27:38,0,115
-chr21	7578497	chr21:7578497:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:20:0,54,232	0/1:10,5:15:18,0,77	0/1:7,5:16:57,0,41
-chr21	7586029	chr21:7586029:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:8:5,0,22	0/0:1,0:4:0,6,19	0/1:2,1:4:7,0,7
-chr21	7587421	chr21:7587421:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,3:21:0,3,255	0/1:7,3:11:28,0,105	0/1:8,4:17:34,0,147
-chr21	7607157	chr21:7607157:M	CACACACACACA	<7>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,9:31:66,0,255	0/0:32,5:39:0,31,255	0/0:39,4:44:0,61,255
-chr21	7607327	chr21:7607327:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,4:5:109,11,0	0/1:0,0:3:1,0,5
-chr21	7612522	chr21:7612522:M	AAAGAAAGAAAGAAAAAAGAAGAGAGAAAGAAAGAAGGAAAGAAAGAGAGAAAGAAAGAAGACAGAAAAGGAAAGAAAGAAAGAAA	<15.2>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,2:5:35,0,66	1/1:0,5:6:130,15,0	0/1:4,6:10:125,0,77
-chr21	7613641	chr21:7613641:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:11:6,0,112	0/1:2,3:6:38,0,20	0/1:6,2:8:11,0,82
-chr21	7636763	chr21:7636763:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,11:23:246,0,58	0/1:7,8:16:130,0,97	0/1:9,10:20:148,0,140
-chr21	7647685	chr21:7647685:M	ATAATCATAATCATAATCATAATCATAATCATAATCATAATCATAA	<6.7>,<8.7>	.	.	Motif=ATAATC	GT:AD:DP:PL	1/1:2,9,1:17:121,8,0,150,21,255	0/1:4,11,0:18:111,0,1,155,41,255	1/2:0,7,3:10:94,35,40,84,0,134
-chr21	7662620	chr21:7662620:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:25:0,71,255	0/0:21,4:25:0,15,240	0/1:12,13:27:110,0,118
-chr21	7669085	chr21:7669085:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,1:18:0,19,162	0/0:9,0:10:0,26,144	0/1:6,6:17:51,0,100
-chr21	7756074	chr21:7756074:M	AAAAAAAAAAAACAAAAAAAACCAAAAAAAAAAACCAAAAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,3:11:20,0,108	0/0:20,0:22:0,64,255	0/0:17,1:18:0,36,255
-chr21	7762615	chr21:7762615:M	ACACACACACACACACACACACCGCACACACACACA	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,255	0/1:7,5:12:54,0,90	0/0:16,0:17:0,50,255
-chr21	7772844	chr21:7772844:M	AAAAAAAGAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:13:56,0,115	0/1:8,10:18:127,0,91	0/1:10,7:18:87,0,134
-chr21	7773308	chr21:7773308:M	TTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:19:246,0,140	0/1:6,9:16:195,0,131	0/1:12,8:21:155,0,255
-chr21	7784201	chr21:7784201:M	CACACACACGCGCACACACACACACACACACACACACACACACACACACA	<26>	.	.	Motif=CA	GT:AD:DP:PL	0/1:8,5:13:51,0,104	0/1:0,1:2:11,0,5	0/0:9,0:10:0,29,167
-chr21	7788458	chr21:7788458:M	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	<6.2>,<9.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/2:0,2,3:5:103,57,75,54,0,45	0/1:5,5,0:10:117,0,116,131,89,208	1/2:0,4,8:12:235,148,197,107,0,84
-chr21	7788509	chr21:7788509:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:24,0,16	0/0:6,0:7:0,19,78	0/1:2,3:5:21,0,9
-chr21	7801440	chr21:7801440:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8:20:128,0,131	0/1:14,9:24:93,0,196	0/1:12,12:26:166,0,161
-chr21	7809419	chr21:7809419:M	TGTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,10:21:136,0,123	0/1:5,4:9:44,0,61	0/1:8,4:12:36,0,109
-chr21	7814549	chr21:7814549:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:9:59,0,116	0/0:3,0:5:0,9,83	0/0:8,0:8:0,24,223
-chr21	7820840	chr21:7820840:M	TTTATTTATTTATTTATTTATTTATTTA	<11>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/1:10,4:14:71,0,239	0/0:17,0:17:0,51,255
-chr21	7822727	chr21:7822727:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,16:22:230,0,37	0/1:10,13:23:160,0,107	0/0:15,0:15:0,44,255
-chr21	7825171	chr21:7825171:M	AAAAAAAAAAAAAAAGAAACAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:12:105,0,4	1/1:1,9:10:128,13,0	0/1:12,13:27:141,0,124
-chr21	7839019	chr21:7839019:M	AAACAAACAAACAAACA	<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,20:20:255,60,0	0/1:11,9:20:193,0,250
-chr21	7847038	chr21:7847038:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,21:21:255,62,0	0/1:13,14:27:187,0,165
-chr21	7851469	chr21:7851469:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:30,0,6	1/1:0,3:3:48,9,0	1/1:1,5:6:67,1,0
-chr21	7860950	chr21:7860950:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:11,0:11:0,33,210	0/0:13,0:14:0,41,244	0/1:3,6:10:83,0,36
-chr21	7915776	chr21:7915776:M	ATTCCATTCCATTC	<27>	.	.	Motif=ATTCC	GT:AD:DP:PL	0/1:119,133:252:255,0,255	0/1:132,147:279:255,0,255	0/1:124,135:259:255,0,255
-chr21	7915808	chr21:7915808:M	TCCATTCCATTCCTTTCCATTCC	<27>	.	.	Motif=TCCAT	GT:AD:DP:PL	0/1:70,134:204:255,0,255	0/1:64,148:212:255,0,255	0/1:62,136:198:255,0,255
-chr21	7957981	chr21:7957981:M	TTCCATTCCACTCCACTCAATTCCATTCCCTTCCATTCTGTTCCATTCCGTTTCATTCCA	<27>	.	.	Motif=TTCCA	GT:AD:DP:PL	0/1:49,52:103:255,0,255	0/1:66,68:135:255,0,255	0/1:62,44:108:219,0,255
-chr21	8108887	chr21:8108887:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:7:0,17,60	0/0:5,1:9:0,10,51	0/1:2,3:8:8,0,22
-chr21	8109940	chr21:8109940:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,3:3:89,9,0	1/1:0,3:3:90,9,0	1/1:0,5:5:156,15,0
-chr21	8113624	chr21:8113624:M	ATATAAATATACATATATATAT	<3.5>	.	.	Motif=ATATAA	GT:AD:DP:PL	0/0:20,0:20:0,57,255	0/1:12,4:16:13,0,131	0/1:27,9:36:29,0,255
-chr21	8127279	chr21:8127279:M	TTTTTTTTTTTTTTGTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:35:0,36,226	0/1:16,8:29:47,0,78	0/0:27,0:38:0,6,170
-chr21	8144024	chr21:8144024:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:20,2:22:0,36,219	0/1:14,6:20:17,0,112	0/1:5,6:12:50,0,27
-chr21	8155122	chr21:8155122:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,3:19:0,17,146	0/1:12,5:19:5,0,102	0/1:15,8:24:25,0,113
-chr21	8158619	chr21:8158619:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:4,4:8:27,0,27	0/1:1,1:2:7,0,7	0/1:1,1:3:9,0,5
-chr21	8161040	chr21:8161040:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,5:18:8,0,98	0/0:17,4:21:0,12,144	0/0:14,2:17:0,23,144
-chr21	8171058	chr21:8171058:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:1,8:10:95,12,0	1/1:4,19:23:198,12,0	1/1:0,14:14:188,39,0
-chr21	8172081	chr21:8172081:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:24:144,0,145	0/1:5,15:21:205,0,24	0/1:6,16:23:224,0,38
-chr21	8182202	chr21:8182202:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:30,0,44	0/1:6,2:8:3,0,52	0/1:7,4:11:20,0,57
-chr21	8188839	chr21:8188839:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,3:26:0,24,255	0/1:9,4:14:30,0,111	0/0:24,3:27:0,27,255
-chr21	8192437	chr21:8192437:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:34:46,0,255	0/1:11,13:28:152,0,109	0/0:37,6:45:0,30,255
-chr21	8195715	chr21:8195715:M	TTTTTTTTTTTTTTTTTTTTCTTTTTT	<28>,<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,14,2:20:199,0,9,161,33,253	0/2:3,3,3:9:62,7,30,0,7,62	0/1:4,10,2:18:142,0,19,95,24,183
-chr21	8200710	chr21:8200710:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:9:24,0,74	0/0:5,0:5:0,15,80	0/1:2,3:5:35,0,18
-chr21	8202105	chr21:8202105:M	AAGAAAAGAAAA	<27>	.	.	Motif=AAGAA	GT:AD:DP:PL	0/0:16,1:17:0,39,255	0/1:12,9:21:46,0,255	0/0:18,4:22:0,18,255
-chr21	8202867	chr21:8202867:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<17.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:67,39:212:229,0,255	0/1:129,51:302:129,0,255	0/1:34,58:182:255,0,255
-chr21	8204667	chr21:8204667:M	CCTCCCTCCCTCCCTCCCTCCCTCCCTGCTCCCTTCCCTCCCTCCTTCCCT	<14.8>	.	.	Motif=CCTC	GT:AD:DP:PL	0/1:58,10:76:41,0,255	0/0:49,0:60:0,170,255	0/1:29,10:39:136,0,255
-chr21	8211687	chr21:8211687:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>,<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:171,195,122:584:255,0,255,255,255,255	0/2:209,195,225:797:255,255,255,0,255,255	0/1:257,297,146:815:255,0,255,255,255,255
-chr21	8212486	chr21:8212486:M	GGGGGGGGGCGGGGGG	<15>	.	.	Motif=G	GT:AD:DP:PL	1/1:4,2277:2447:255,255,0	1/1:5,2047:2290:255,255,0	1/1:21,3722:3839:255,255,0
-chr21	8213330	chr21:8213330:M	CCTCCTCCTCC	<3.3>	.	.	Motif=CCT	GT:AD:DP:PL	0/1:121,96:217:255,0,255	0/1:117,86:203:255,0,255	0/1:89,178:267:255,0,255
-chr21	8214735	chr21:8214735:M	GGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG	<10.7>,<11.7>	.	.	Motif=GGC	GT:AD:DP:PL	0/1:137,165,86:499:255,0,255,255,255,255	0/1:157,129,66:435:255,0,255,255,255,255	0/2:143,35,154:353:255,255,255,0,255,255
-chr21	8216067	chr21:8216067:M	CCCCCGCCCCCCCCCC	<17>	.	.	Motif=C	GT:AD:DP:PL	0/1:99,38:142:229,0,255	0/1:133,31:169:3,0,255	0/1:112,26:142:16,0,255
-chr21	8217209	chr21:8217209:M	CCCCCCCCCACCCCAC	<3>	.	.	Motif=CCCCA	GT:AD:DP:PL	1/1:25,214:304:255,255,0	0/1:36,83:140:255,0,60	1/1:23,210:280:255,255,0
-chr21	8218942	chr21:8218942:M	CGCGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:1596,264:2059:255,0,255	0/1:1183,547:1917:255,0,255	0/1:2634,345:3129:255,0,255
-chr21	8219904	chr21:8219904:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCT	<11.5>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:426,375:1393:255,0,255	0/1:343,594:1622:255,0,255	0/1:734,217:1652:255,0,255
-chr21	8220187	chr21:8220187:M	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	<6.2>,<7.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:8,220,368:1221:255,255,255,255,0,255	1/2:4,573,642:1580:255,255,255,255,0,255	1/2:7,569,333:1565:255,255,255,255,0,255
-chr21	8220689	chr21:8220689:M	TTTTTTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:164,99:387:255,0,255	0/1:58,70:304:255,0,255	0/0:321,13:459:0,255,255
-chr21	8220758	chr21:8220758:M	TCTCGCTCTCGCTCTC	<1.3>	.	.	Motif=TCTCGC	GT:AD:DP:PL	0/1:1930,646:2576:255,0,255	0/1:1973,593:2567:255,0,255	0/0:2435,288:2728:0,255,255
-chr21	8221788	chr21:8221788:M	ACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<30>	.	.	Motif=AC	GT:AD:DP:PL	0/1:50,95:371:255,0,255	0/1:48,30:368:255,0,255	0/1:131,98:503:255,0,255
-chr21	8222183	chr21:8222183:M	GGTGGGGTGGGGTG	<5.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,1:4:25,0,30	1/1:0,4:4:110,12,0
-chr21	8222330	chr21:8222330:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<11>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:46,66:367:255,0,255	0/1:31,159:371:255,0,255	0/1:179,30:376:255,0,255
-chr21	8222802	chr21:8222802:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<13.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:27,172,163:545:255,255,255,255,0,255	1/2:53,236,82:707:255,255,255,255,0,255	0/2:156,50,131:676:255,255,255,0,255,255
-chr21	8223498	chr21:8223498:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<11.7>,<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/2:0,11,18:47:255,255,255,255,0,255	1/2:1,7,10:26:255,255,255,234,0,199	2/2:0,2,32:52:255,255,255,97,14,0
-chr21	8224496	chr21:8224496:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<19>	.	.	Motif=TC	GT:AD:DP:PL	0/1:249,306:1763:255,0,255	0/1:177,719:2098:255,0,255	0/1:259,102:1844:255,0,255
-chr21	8225211	chr21:8225211:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<11.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:718,133:1129:255,0,255	0/1:480,175:925:255,0,255	0/1:463,279:1104:255,0,255
-chr21	8226071	chr21:8226071:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<14.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:304,564:1442:255,0,255	0/1:481,795:1718:255,0,255	0/1:324,930:2005:255,0,255
-chr21	8228131	chr21:8228131:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,112,57:175:255,255,255,255,0,255	1/2:0,90,44:144:255,255,255,255,0,255	1/2:0,149,55:210:255,255,255,255,0,255
-chr21	8231395	chr21:8231395:M	GAGAAGAGAGGAGAGAGAGAGAGAGACGGGGAGAGAGGGGGGAGAGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGA	<67.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,187:187:255,255,0	1/1:0,189:195:255,255,0	1/1:0,166:172:255,255,0
-chr21	8239234	chr21:8239234:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,3:13:168,95,80,58,0,39	1/2:1,2,7:13:228,171,186,24,0,24	1/2:0,4,4:11:212,103,87,103,0,88
-chr21	8243074	chr21:8243074:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:17,43:87:255,0,245	0/1:13,39:70:255,0,223	1/1:9,90:119:255,73,0
-chr21	8245701	chr21:8245701:M	ATACAATACAATACGATACGATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATAC	<12.8>	.	.	Motif=ATACA	GT:AD:DP:PL	0/1:54,195:337:255,0,255	0/1:27,165:446:255,0,255	0/1:77,160:393:255,0,255
-chr21	8246914	chr21:8246914:M	TTTCTTTCTTTCTTTCTTTATTACTTTCTCTTTTTCTT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:964,316:1292:255,0,255	0/1:943,415:1370:255,0,255	0/1:1109,542:1674:255,0,255
-chr21	8247291	chr21:8247291:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:37,72:279:255,0,255	0/1:28,26:219:255,0,255	0/1:59,64:328:255,0,255
-chr21	8253488	chr21:8253488:M	CGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:17,4:21:6,0,217	0/1:13,12:26:119,0,131	0/0:16,0:16:0,47,255
-chr21	8253712	chr21:8253712:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:34,19:59:255,0,255	0/1:86,21:125:194,0,255	0/1:19,16:44:255,0,255
-chr21	8255893	chr21:8255893:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/1:51,90:212:255,0,255	0/1:101,92:304:255,0,255	0/1:138,117:362:255,0,255
-chr21	8256698	chr21:8256698:M	GGGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:3,13:18:255,0,39	0/1:4,6:11:119,0,81	0/1:3,1:4:16,0,67
-chr21	8327069	chr21:8327069:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:21,3:25:0,32,229	0/1:16,8:24:29,0,125	0/1:4,5:9:35,0,23
-chr21	8338167	chr21:8338167:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,5:23:0,7,142	0/1:6,4:11:14,0,45	0/1:12,11:24:56,0,76
-chr21	8339267	chr21:8339267:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/0:26,3:29:0,40,255	0/0:31,1:32:0,77,255	0/1:30,10:40:29,0,255
-chr21	8341664	chr21:8341664:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:3,4:8:32,0,16	0/1:2,3:5:22,0,10	0/1:1,0:3:2,0,6
-chr21	8344085	chr21:8344085:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,9:26:42,0,111	0/0:26,4:30:0,36,246	0/1:18,10:29:35,0,135
-chr21	8354103	chr21:8354103:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:0,8:10:110,23,0	0/1:6,15:21:141,0,21	1/1:0,15:15:204,42,0
-chr21	8355126	chr21:8355126:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,11:21:145,0,100	0/1:11,13:24:152,0,118	0/1:7,11:18:140,0,70
-chr21	8375482	chr21:8375482:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,11:41:74,0,255	0/1:18,11:33:113,0,204	0/0:39,2:43:0,92,255
-chr21	8377740	chr21:8377740:M	TTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:71,0,44	0/1:5,1:8:10,0,134	0/0:5,0:9:0,26,204
-chr21	8378760	chr21:8378760:M	TTTTTTTTTTTTTTTTTTTTCTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10,2:21:116,0,80,106,73,255	0/2:3,1,3:8:74,59,91,0,29,74	0/1:9,8,0:18:91,0,96,131,145,255
-chr21	8383755	chr21:8383755:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:16:15,0,154	0/1:8,6:16:62,0,85	0/0:11,2:13:0,5,147
-chr21	8385914	chr21:8385914:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<17.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:64,58:227:255,0,255	0/1:111,59:296:255,0,255	0/1:31,57:178:255,0,255
-chr21	8392532	chr21:8392532:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:21,6:28:81,0,255	0/1:94,20:115:162,0,255	0/1:33,15:53:246,0,255
-chr21	8394722	chr21:8394722:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>,<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:170,179,120:554:255,0,255,255,255,255	0/2:211,203,214:784:255,255,255,0,255,255	0/1:282,344,149:888:255,0,255,255,255,255
-chr21	8395521	chr21:8395521:M	GGGGGGGGGCGGGGGG	<15>	.	.	Motif=G	GT:AD:DP:PL	1/1:5,2318:2504:255,255,0	1/1:10,2064:2322:255,255,0	1/1:18,3744:3867:255,255,0
-chr21	8397769	chr21:8397769:M	GGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG	<10.7>,<11.7>	.	.	Motif=GGC	GT:AD:DP:PL	0/1:38,28,20:109:255,0,255,255,255,255	0/1:38,30,10:93:255,0,255,255,255,255	0/2:28,12,31:78:255,220,255,0,255,255
-chr21	8399101	chr21:8399101:M	CCCCCGCCCCCCCCCC	<17>	.	.	Motif=C	GT:AD:DP:PL	0/1:134,47:184:244,0,255	0/0:195,23:233:0,255,255	0/1:124,29:159:9,0,255
-chr21	8400242	chr21:8400242:M	CCCCCCCCCCCACCCC	<15>,<20>	.	.	Motif=C	GT:AD:DP:PL	1/2:16,62,47:173:255,255,255,255,0,255	0/2:88,40,61:235:255,255,255,0,255,255	1/2:24,44,74:194:255,255,255,255,0,255
-chr21	8402416	chr21:8402416:M	CTCTCGCTCTCTCTCTGTCTCT	<67.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,44:44:255,121,0	1/1:0,40:40:255,110,0	1/1:0,20:20:237,55,0
-chr21	8402454	chr21:8402454:M	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	<7.2>,<8.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:0,32,30:91:255,255,255,255,0,255	1/2:0,80,37:171:255,255,169,255,0,255	1/2:0,53,22:129:255,255,118,255,0,255
-chr21	8402956	chr21:8402956:M	TTTTTTTTTTTTTTTTTTT	<24>,<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,29,18,20:76:255,255,255,255,80,255,255,0,233,255	1/3:0,31,40,55:141:255,255,255,255,255,255,255,0,2,255	1/3:0,58,17,50:147:255,255,255,255,255,255,255,0,255,255
-chr21	8402972	chr21:8402972:M	TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,41:41:255,112,0	1/1:0,79:79:255,216,0	1/1:0,51:51:255,140,0
-chr21	8403707	chr21:8403707:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:20,33:85:206,0,255	0/1:15,82:128:255,0,237	0/1:25,44:80:255,0,255
-chr21	8404787	chr21:8404787:M	ACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<30>	.	.	Motif=AC	GT:AD:DP:PL	0/1:32,92:353:255,0,255	0/1:59,51:407:255,0,255	0/1:109,86:460:255,0,255
-chr21	8405182	chr21:8405182:M	GGTGGGGTGGGGTG	<5.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	0/1:0,1:2:22,0,11	0/1:0,0:3:4,0,22	0/1:1,4:6:100,0,23
-chr21	8405329	chr21:8405329:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<12>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:45,120:317:255,0,255	0/1:41,72:305:255,0,255	0/1:212,49:396:255,0,255
-chr21	8405574	chr21:8405574:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<27.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:145,321:869:255,0,255	0/1:178,287:861:255,0,255	0/1:107,56:842:255,0,255
-chr21	8405801	chr21:8405801:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<13.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:40,111,194:576:255,255,255,255,0,255	1/2:70,227,119:809:255,255,255,255,0,255	1/2:166,47,151:808:255,255,255,205,0,255
-chr21	8406497	chr21:8406497:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<11.7>,<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/2:0,10,9:32:255,247,209,255,0,255	1/2:0,7,8:27:255,221,220,204,0,185	2/2:0,0,24:36:255,255,255,65,5,0
-chr21	8407495	chr21:8407495:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<19>	.	.	Motif=TC	GT:AD:DP:PL	0/1:256,282:1794:255,0,255	0/1:188,721:2125:255,0,255	0/1:253,120:1808:255,0,255
-chr21	8408210	chr21:8408210:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<11.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:706,131:1121:255,0,255	0/1:540,198:1000:255,0,255	0/1:463,283:1094:255,0,255
-chr21	8409070	chr21:8409070:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<14.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:271,550:1400:255,0,255	0/1:501,750:1690:255,0,255	0/1:339,888:1944:255,0,255
-chr21	8411130	chr21:8411130:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,96,45:143:255,255,255,255,0,255	1/2:0,88,49:146:255,255,255,255,0,255	1/2:0,129,58:192:255,255,255,255,0,255
-chr21	8422258	chr21:8422258:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,0:3:8,10,37,0,28,25	1/2:0,2,3:5:131,79,73,51,0,42	1/1:0,3,0:5:91,10,0,79,0,77
-chr21	8426098	chr21:8426098:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:19,41:93:255,0,255	0/1:9,48:81:255,0,94	1/1:11,106:145:255,81,0
-chr21	8428725	chr21:8428725:M	ATACAATACAATACGATACGATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATAC	<12.8>	.	.	Motif=ATACA	GT:AD:DP:PL	0/1:51,197:347:255,0,255	0/1:50,167:477:255,0,255	0/1:92,234:474:255,0,255
-chr21	8429938	chr21:8429938:M	TTTCTTTCTTTCTTTCTTTATTACTTTCTCTTTTTCTT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:978,337:1326:255,0,255	0/1:906,441:1360:255,0,255	0/1:1156,522:1693:255,0,255
-chr21	8429966	chr21:8429966:M	TCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	<17.3>	.	.	Motif=TCT	GT:AD:DP:PL	0/1:118,119:460:255,0,255	0/1:83,57:501:255,0,255	0/1:175,122:1001:255,0,255
-chr21	8430315	chr21:8430315:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:45,68:256:255,0,255	0/1:20,17:185:255,0,255	0/1:66,58:322:255,0,255
-chr21	8432061	chr21:8432061:M	CTCCCTCCCTCACTCCCTCCCTCCCTCCCTCCCT	<5.5>,<7.5>	.	.	Motif=CTCC	GT:AD:DP:PL	2/2:0,0,13:14:218,254,255,38,39,0	0/2:1,0,1:2:10,16,52,0,16,10	1/2:0,9,4:14:255,68,72,230,0,210
-chr21	8436522	chr21:8436522:M	CGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/0:16,3:19:0,5,209	0/1:7,9:16:97,0,65	0/0:20,3:24:0,16,255
-chr21	8436746	chr21:8436746:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:18,16:40:255,0,255	0/1:130,31:178:255,0,255	0/1:18,18:42:255,0,255
-chr21	8438935	chr21:8438935:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/1:137,245:599:255,0,255	0/1:219,262:778:255,0,255	0/1:336,354:959:255,0,255
-chr21	8439740	chr21:8439740:M	GGGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:4,4:8:86,0,86	0/1:3,3:7:69,0,58	0/0:4,0:5:0,12,112
-chr21	8443335	chr21:8443335:M	CCCCCGCCCCCCCCCCC	<16>	.	.	Motif=C	GT:AD:DP:PL	0/1:106,59:231:255,0,255	0/1:127,34:215:198,0,255	0/1:183,88:342:255,0,255
-chr21	8444477	chr21:8444477:M	CCCCCCCCCCCACCCC	<15>,<20>	.	.	Motif=C	GT:AD:DP:PL	1/2:20,56,31:153:255,255,255,255,0,255	0/2:79,32,53:215:255,255,255,0,255,255	1/2:21,39,88:211:255,255,255,255,0,255
-chr21	8446212	chr21:8446212:M	CGCGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:1560,268:2085:255,0,255	0/1:1181,564:1930:255,0,255	0/0:2660,329:3158:0,194,255
-chr21	8447163	chr21:8447163:M	TTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:16:255,7,0	0/1:2,12:56:255,0,17	1/1:0,40:70:255,169,0
-chr21	8447179	chr21:8447179:M	TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,30:30:255,86,0	1/1:0,40:47:255,104,0	1/1:0,8:14:112,19,0
-chr21	8447235	chr21:8447235:M	CGCTCTCGCTCTC	<1.7>,<2.3>	.	.	Motif=CGCTCT	GT:AD:DP:PL	1/2:0,3,2:5:90,24,39,71,0,66	.	1/2:0,8,4:12:237,49,79,200,0,191
-chr21	8447914	chr21:8447914:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:17,24:78:186,0,255	0/1:11,49:89:255,0,255	0/1:20,8:48:17,0,255
-chr21	8448628	chr21:8448628:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:26,28:107:255,0,255	0/1:22,29:173:255,0,255	0/0:33,0:209:0,198,255
-chr21	8449389	chr21:8449389:M	GGTGGGGTGGGGTG	<3.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	0/1:1,1:4:9,0,17	0/1:2,0:4:4,0,23	0/1:2,3:6:36,0,18
-chr21	8449536	chr21:8449536:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<16>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:32,27:96:255,0,255	0/1:36,31:104:255,0,255	0/0:164,16:209:0,255,255
-chr21	8449781	chr21:8449781:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:58,69:186:255,0,255	0/1:150,43:237:157,0,255	0/1:35,58:203:255,0,255
-chr21	8449827	chr21:8449827:M	TGTATCTATGTATGTATGTATGTATGT	<9.2>	.	.	Motif=TGTA	GT:AD:DP:PL	1/1:0,1:2:34,5,0	0/1:2,3:8:69,0,75	1/1:0,1:3:43,7,0
-chr21	8449996	chr21:8449996:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<11.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:196,131,278:795:255,255,255,184,0,255	1/2:87,234,167:728:255,255,255,255,0,255	0/2:375,52,253:1090:255,255,255,0,255,255
-chr21	8450684	chr21:8450684:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/1:0,19:35:255,73,0	1/1:0,17:37:255,68,0	1/1:4,32:49:255,8,0
-chr21	8451682	chr21:8451682:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<14>,<17>	.	.	Motif=TC	GT:AD:DP:PL	1/2:14,508,30:654:255,255,196,255,0,255	1/2:34,142,150:424:255,255,255,255,0,255	1/2:8,533,25:724:255,255,255,255,0,255
-chr21	8452385	chr21:8452385:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<6.8>,<8.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:53,67,6:223:255,0,255,255,255,255	1/2:79,62,172:468:255,255,255,255,0,255	0/2:102,29,120:358:255,255,255,0,255,255
-chr21	8452413	chr21:8452413:M	TTTCTTTTTCTTTTTCT	<1.8>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/0:810,10:820:0,255,255	0/1:787,353:1140:255,0,255	0/0:934,198:1133:0,49,255
-chr21	8453237	chr21:8453237:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<11.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:250,37:293:0,214,255	0/1:38,37:78:255,0,255	0/1:201,159:365:255,0,255
-chr21	8455277	chr21:8455277:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,104,65:172:255,255,255,255,0,255	1/2:0,100,61:172:255,255,255,255,0,255	1/2:0,129,73:208:255,255,255,255,0,255
-chr21	8465015	chr21:8465015:M	GTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,24,1:60:255,0,22,255,50,255	1/2:9,24,54:121:255,255,255,165,0,173	1/1:0,46,1:56:255,148,0,255,130,255
-chr21	8466840	chr21:8466840:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:66,37:129:255,0,255	0/1:33,13:97:246,0,255	0/1:96,66:201:255,0,255
-chr21	8470659	chr21:8470659:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:19,32:83:255,0,255	0/1:11,34:61:255,0,147	1/1:8,90:117:255,95,0
-chr21	8523526	chr21:8523526:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:23:130,0,119	0/1:22,10:32:69,0,255	0/0:40,1:59:0,153,255
-chr21	8527356	chr21:8527356:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,25:33:255,0,23	1/1:8,36:44:255,0,0	0/1:33,22:56:207,0,255
-chr21	8538019	chr21:8538019:M	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<11.8>	.	.	Motif=GAAG	GT:AD:DP:PL	0/0:3,0:4:0,0,39	0/1:5,3:10:25,0,57	0/0:13,1:17:0,11,192
-chr21	8539043	chr21:8539043:M	TGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:1,0:4:0,9,58	0/0:2,0:4:0,6,57	0/1:9,4:16:77,0,220
-chr21	8557646	chr21:8557646:M	TTTTTTTGTTTTGTTTTGTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:66,0,40	0/1:4,6:10:134,0,80	0/1:19,7:27:110,0,255
-chr21	8558574	chr21:8558574:M	GTGTGTGTCTGTGTGTGTGAGAGAGTGTGTGGTTTGTGTGT	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,4:23:2,0,235	0/1:19,7:27:36,0,228	0/0:34,5:39:0,32,255
-chr21	8558996	chr21:8558996:M	ATATATATATATATATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/0:28,0:30:0,87,255	0/1:20,7:27:36,0,250
-chr21	8580414	chr21:8580414:M	AGACAAGACAAGA	<1.6>	.	.	Motif=AGACA	GT:AD:DP:PL	0/1:17,5:22:73,0,255	0/0:29,1:30:0,62,255	0/1:29,11:40:179,0,255
-chr21	8582351	chr21:8582351:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:23:25,0,203	0/1:10,25:35:255,0,55	0/0:30,2:32:0,61,255
-chr21	8584854	chr21:8584854:M	GAAAGAAAGAAAGAAGGAAAGAAGGAAGGAAGGAAAAAAAAGAAAGAAAAGAAAGAAAGGAAAAGAAAAAAGAAAAGAAA	<19.8>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,2:3:20,6,0	1/1:0,3:4:21,7,0	0/0:2,0:2:0,4,14
-chr21	8584947	chr21:8584947:M	GAAGAAAGGAAGGAAGAAGGCAAGGGAAGGGAAGAGAAGAGAAAGGAAGATGGAAAGAAGGAAGGAAG	<12.5>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:7,3:10:46,0,142	0/0:10,0:10:0,30,250	0/0:19,1:20:0,36,255
-chr21	8590466	chr21:8590466:M	GGGGGGGGGGGGG	<11>,<12>	.	.	Motif=G	GT:AD:DP:PL	2/2:1,1,11:13:172,150,172,22,22,0	2/2:1,0,13:14:185,188,211,25,40,0	1/2:0,28,9:38:255,108,35,255,0,255
-chr21	8591042	chr21:8591042:M	TTCTTCCTCTTCCTTTCTCTTCTTCTT	<7.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:14,8:24:92,0,202	0/1:15,13:29:168,0,201	0/0:30,0:34:0,84,255
-chr21	8598361	chr21:8598361:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:0,9:11:123,0,0	0/1:4,11:21:161,0,65	0/1:16,5:23:21,0,227
-chr21	8600957	chr21:8600957:M	ATATACATATTGCAATATACATATA	<1.8>	.	.	Motif=ATATAC	GT:AD:DP:PL	0/0:14,1:15:0,18,255	0/1:23,4:27:26,0,255	0/1:18,7:25:108,0,255
-chr21	8618445	chr21:8618445:M	TATATATATAAAATATATATATATATATATA	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,12:13:167,22,0	0/1:1,0:2:6,0,9	0/1:6,5:11:43,0,58
-chr21	8643027	chr21:8643027:M	ATAGACAGATAGATAGATAGATAGATAGATAAGGTAGATAG	<11.2>	.	.	Motif=ATAG	GT:AD:DP:PL	.	.	1/1:0,6:8:110,18,0
-chr21	8651787	chr21:8651787:M	CCGCCGCGCCGCCGCTGTCCGCCTCTCCGCCGCGCCGCCGCTGTCCGCCTCTCCGCCGCGCCGCCGC	<5>	.	.	Motif=CCG	GT:AD:DP:PL	1/1:0,1:2:28,3,0	1/1:0,4:5:114,12,0	0/1:1,3:4:85,0,14
-chr21	8656862	chr21:8656862:M	GGCCGTGGCCGTGGCCCTGGCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGCCCTGCCCTGGCCCT	<7.7>	.	.	Motif=GGCCCT	GT:AD:DP:PL	0/1:1,3:4:74,0,14	0/1:1,5:6:126,0,8	0/0:1,0:1:0,3,23
-chr21	8658750	chr21:8658750:M	AGGGTCAGGGCCAGGG	<22.5>	.	.	Motif=AGGGCC	GT:AD:DP:PL	0/0:16,0:16:0,48,255	0/0:23,0:23:0,69,255	0/1:7,4:11:15,0,147
-chr21	8659331	chr21:8659331:M	GGGCCAGGGCCAAGGCAGGGCCAG	<22.5>	.	.	Motif=GGGCCA	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/0:26,1:27:0,69,255	0/1:5,4:9:21,0,109
-chr21	8660483	chr21:8660483:M	GCCCCGCCCTACCCTGGCCTTGCCCTGCCCTGGCCCTGCC	<4.8>	.	.	Motif=GCCCT	GT:AD:DP:PL	0/1:7,1:9:1,0,161	0/1:7,4:11:67,0,156	0/1:1,1:3:19,0,18
-chr21	8661284	chr21:8661284:M	ATTTTTATTTTTA	<22.5>	.	.	Motif=ATTTTT	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:35,0:35:0,105,255	0/1:9,21:30:164,0,167
-chr21	8661972	chr21:8661972:M	CATTTCATTTCAT	<27>	.	.	Motif=CATTT	GT:AD:DP:PL	0/1:7,4:11:16,0,164	0/1:5,2:7:3,0,119	1/1:11,169:180:255,189,0
-chr21	8662029	chr21:8662029:M	TGAGATGAGATGAAATGACAAAATGATGAGATGAGATGAGATGATGAGATGA	<27>	.	.	Motif=TGAGA	GT:AD:DP:PL	0/1:4,2:6:7,0,89	0/1:1,3:4:25,0,15	0/1:1,7:8:62,0,4
-chr21	8662161	chr21:8662161:M	GAGATGAGATGAGTTAAAATGAGATGAAATGATGAGATGA	<3.8>,<27>	.	.	Motif=GAGAT	GT:AD:DP:PL	0/0:11,0,2:13:0,33,255,12,255,255	0/2:9,0,3:12:5,32,252,0,220,212	1/2:3,4,7:14:159,1,63,93,0,147
-chr21	8664794	chr21:8664794:M	GATGAGATGAGATTTGATGAAATGATGAGATGAAATGATGAGATGATATGAAATGATGAGATGAGATGGGATAAGATGAAATGA	<27>	.	.	Motif=GATGA	GT:AD:DP:PL	.	.	1/1:0,3:3:36,8,0
-chr21	8671550	chr21:8671550:M	CCCCACCCCAC	<2.4>	.	.	Motif=CCCCA	GT:AD:DP:PL	0/0:16,3:19:0,19,136	0/0:18,4:22:0,16,146	0/1:20,9:29:17,0,133
-chr21	8674134	chr21:8674134:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:80,9,0	1/1:0,6:6:158,18,0	0/1:10,2:14:13,0,247
-chr21	8681520	chr21:8681520:M	GGAAGGAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGGAAGGAAGGAAG	<14.2>	.	.	Motif=GGAA	GT:AD:DP:PL	0/1:2,0:3:6,0,34	0/1:1,0:3:20,0,12	0/1:12,12:26:190,0,182
-chr21	8682753	chr21:8682753:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,1,3	0/0:1,0:2:0,6,46	1/1:0,3:3:80,9,0
-chr21	8684339	chr21:8684339:M	TGTGCGTGTGTGTGTGGGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG	<13.5>	.	.	Motif=TGTG	GT:AD:DP:PL	0/1:6,4:11:59,0,109	0/1:7,3:11:53,0,126	0/1:12,5:19:92,0,218
-chr21	8684707	chr21:8684707:M	AAAATAAAATAAAA	<1.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:77,6:83:0,156,255	0/1:73,27:100:37,0,255	0/0:107,18:125:0,131,255
-chr21	8685216	chr21:8685216:M	GACAAAGACAAA	<2.2>	.	.	Motif=GACAAA	GT:AD:DP:PL	1/1:0,3:5:69,14,0	1/1:0,9:10:149,29,0	0/1:18,5:23:10,0,211
-chr21	8686014	chr21:8686014:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAA	<29>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:64,40,36,28,0,90	1/2:0,3,1:8:68,42,32,36,0,85	1/2:1,5,9:21:235,206,217,27,0,132
-chr21	8690190	chr21:8690190:M	AAAAAAAAAAAAAAAAAGAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,16,9:29:255,37,54,127,0,92	1/2:5,14,10:31:255,23,78,92,0,74	0/2:11,5,10:28:87,23,205,0,61,51
-chr21	8690516	chr21:8690516:M	TTTTTTCTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,3,22:29:255,196,224,46,31,0	1/2:3,12,13:34:235,33,125,51,0,49	0/2:12,3,32:54:255,239,255,0,146,51
-chr21	8690764	chr21:8690764:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10:20:219,0,151	0/1:6,8:18:165,0,150	0/1:18,5:28:61,0,255
-chr21	8691722	chr21:8691722:M	TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATATA	<21>,<25>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,3:4:128,101,96,12,9,0	.	1/1:0,4,0:5:157,12,0,149,12,144
-chr21	8695282	chr21:8695282:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,26,28:59:255,255,158,255,0,112	1/2:5,28,16:64:255,76,151,178,0,124	0/2:12,12,26:64:255,125,255,0,102,88
-chr21	8699297	chr21:8699297:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20:44:238,0,255	0/1:29,20:49:203,0,255	0/1:35,16:55:146,0,255
-chr21	8699702	chr21:8699702:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,13:29:70,146,255,0,123,82	0/2:6,2,4:14:15,21,92,0,20,51	0/1:34,13,4:51:2,0,255,94,231,255
-chr21	8700053	chr21:8700053:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,38:68:255,0,255	0/1:18,16:47:255,0,255	0/1:44,43:107:255,0,255
-chr21	8702753	chr21:8702753:M	TATATACATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:47,19:66:170,0,255	0/1:56,12:68:17,0,255	0/1:72,21:93:117,0,255
-chr21	8703149	chr21:8703149:M	TGTGTGTGTGTGTGTGTGTG	<8>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,62:79:255,0,110	0/1:23,49:78:255,0,255	0/1:40,55:100:255,0,255
-chr21	8703177	chr21:8703177:M	TATGTATGTGTGTGTGTGTGTATATATATATGTAT	<1.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:44,20:64:255,0,255	0/1:47,12:63:209,0,255	0/1:71,14:89:192,0,255
-chr21	8758717	chr21:8758717:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:44,11:56:97,0,255	0/1:27,14:50:204,0,255	0/1:38,9:51:86,0,255
-chr21	8777201	chr21:8777201:M	TTTTATTTTTAATTTTTTTTTTCTTTT	<4.3>	.	.	Motif=TTTTAT	GT:AD:DP:PL	1/1:6,47:53:255,63,0	1/1:0,34:34:255,98,0	1/1:11,54:65:255,23,0
-chr21	8782166	chr21:8782166:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	1/1:11,38:51:255,15,0	1/1:3,22:25:182,35,0	1/1:6,53:67:255,99,0
-chr21	8782187	chr21:8782187:M	TCTCTCTCTCTCTCT	<9.5>,<10.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,4,3:7:130,30,10,38,0,19	1/2:0,3,3:7:128,38,18,29,0,10	0/1:2,6,3:11:122,0,4,25,3,46
-chr21	8782201	chr21:8782201:M	TATATATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:21,18:39:79,0,108	0/1:6,9:15:50,0,20	0/1:26,28:58:168,0,106
-chr21	8784747	chr21:8784747:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,18:73:145,0,159	0/1:2,12:31:126,0,1	0/1:11,18:65:170,0,100
-chr21	8786414	chr21:8786414:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,26:74:239,0,255	0/1:26,25:51:255,0,255	0/1:50,24:74:196,0,255
-chr21	8788021	chr21:8788021:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT	<20>,<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,17,10:41:49,0,88,64,8,213	1/2:3,5,7:19:48,32,71,31,0,69	0/1:10,21,7:43:105,0,37,145,17,255
-chr21	8788743	chr21:8788743:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,15:51:99,0,138	0/1:11,13:35:128,0,28	0/1:38,11:60:45,0,231
-chr21	8806868	chr21:8806868:M	GTGTGTGTGTGCGCGCGTGTGTGTGTGTGTGTGTGTTTGTGTGTGCGGTGTGTGTTTGTGTGTGTG	<22.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,3:12:35,0,186	0/0:13,1:14:0,16,255	0/0:9,1:10:0,7,200
-chr21	8812136	chr21:8812136:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,70:96:255,0,37	0/1:15,38:55:255,0,33	0/1:34,81:116:255,0,103
-chr21	8812543	chr21:8812543:M	TTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,7:28:156,0,255	0/1:13,2:20:34,0,255	0/1:32,4:55:54,0,255
-chr21	8813848	chr21:8813848:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:7:105,0,6	1/1:0,0:1:9,2,0	0/1:0,1:4:23,0,7
-chr21	8814065	chr21:8814065:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,7:43:29,0,95	0/1:7,8:26:39,0,35	0/1:26,14:51:27,0,125
-chr21	8814500	chr21:8814500:M	TTTCTTTTTTTTCTTTT	<3.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/0:25,7:32:0,15,171	0/1:14,6:20:6,0,82	0/0:38,9:47:0,34,255
-chr21	8815123	chr21:8815123:M	TTTTTTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,1:12:56,22,183,0,160,157	1/2:0,3,3:6:158,31,13,31,0,13	0/1:8,4,1:13:92,0,186,29,189,215
-chr21	8816400	chr21:8816400:M	AGGGTTAGGGTTAGGGGTTAGGGTTAGGGTCAGGGGTTAGTGGTCAGGTTCAGGGGTTAGGGATCAGGGTCAGGGGTTAGGGATCAGGGTCAGGTTCAGGG	<12.5>	.	.	Motif=AGGGTC	GT:AD:DP:PL	1/1:0,4:4:106,12,0	0/0:0,0:2:0,0,0	1/1:0,2:2:53,6,0
-chr21	8817239	chr21:8817239:M	TTCTTTTCTTTCTTGTTTTTTTTTTTTTTTC	<5.8>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:13,20:36:168,0,54	0/1:9,25:35:209,0,10	1/1:9,24:40:241,0,0
-chr21	8824095	chr21:8824095:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,3:19:0,13,175	0/1:10,5:15:24,0,91	0/0:29,5:34:0,29,255
-chr21	8828774	chr21:8828774:M	AAAAAAAAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,8:12:189,0,27	0/1:2,11:15:255,0,31	0/1:2,20:26:255,0,6
-chr21	8829420	chr21:8829420:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6:28:7,0,147	0/1:14,12:31:55,0,121	0/1:33,12:50:4,0,255
-chr21	8831799	chr21:8831799:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,14:23:134,0,44	0/1:5,18:26:176,0,15	0/1:18,11:31:60,0,177
-chr21	8836653	chr21:8836653:M	AAAAAAAAAAAAAAAAAAAAGAAAA	<21>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,6,1:29:138,0,255,178,122,255	0/2:6,1,4:15:1,11,224,0,42,39	0/1:9,9,1:25:231,0,183,253,69,255
-chr21	8847278	chr21:8847278:M	TTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,9:28:146,0,255	0/1:18,5:36:89,0,255	0/1:21,2:43:3,0,255
-chr21	8877314	chr21:8877314:M	TTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,6,1:22:87,0,118,94,72,228	0/2:2,0,5:9:88,100,158,0,26,15	0/2:7,0,4:15:39,75,236,0,120,130
-chr21	8988039	chr21:8988039:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:20,12:36:215,0,255	0/1:99,22:123:152,0,255	0/1:34,16:54:224,0,255
-chr21	8990385	chr21:8990385:M	GTCTGTCTGTCTGTCT	<4.5>,<5.5>	.	.	Motif=GTCT	GT:AD:DP:PL	1/2:16,53,26:95:255,45,7,251,0,255	1/2:0,53,29:96:255,255,29,255,0,255	0/2:30,29,32:91:255,49,224,0,149,255
-chr21	8990441	chr21:8990441:M	CACACCACACACACACACACACAGACACTCTCACACTCACACACAC	<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:17,71:136:255,72,0	1/1:0,88:107:255,255,0	0/1:27,40:112:255,0,162
-chr21	8993629	chr21:8993629:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:16,81,83:180:255,255,255,255,0,255	1/2:1,107,79:188:255,255,255,255,0,255	1/2:39,80,73:194:255,255,197,213,0,255
-chr21	8995570	chr21:8995570:M	ATATATATATATATATATATATATATATATATATATATATATAT	<4>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,57:91:255,175,0	1/1:0,80:96:255,227,0	1/1:0,79:101:255,170,0
-chr21	8995801	chr21:8995801:M	ATGGATATGGAT	<2.2>	.	.	Motif=ATGGAT	GT:AD:DP:PL	0/0:38,8:46:0,38,255	0/0:24,8:33:0,3,177	0/1:46,23:70:56,0,255
-chr21	8996039	chr21:8996039:M	AAAAAAAAAAAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:81,9,0	1/1:0,2:4:78,9,0	0/1:0,8:16:218,0,22
-chr21	8996071	chr21:8996071:M	GAAGGAAGGAAGGAAGGAAGGA	<6.5>,<9.5>,<10.5>	.	.	Motif=GAAG	GT:AD:DP:PL	1/3:0,3,0,8:14:208,179,166,96,62,106,37,0,69,66	2/3:0,0,9,5:18:255,255,255,37,20,0,74,52,0,51	1/3:0,14,0,18:36:255,255,255,250,133,255,123,0,255,255
-chr21	8997980	chr21:8997980:M	TATATATATATTCATATATACATATGCATATATATGTATAATATACATATATACATGCATACACATATATAATATACATATATATA	<30.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,8:40:167,0,192	0/1:2,8:22:186,0,24	0/1:11,4:35:64,0,251
-chr21	9002075	chr21:9002075:M	GTGGGGTGGGG	<1.8>	.	.	Motif=GTGGG	GT:AD:DP:PL	0/1:93,57:150:255,0,255	0/1:94,39:133:255,0,255	0/1:161,31:192:18,0,255
-chr21	9021106	chr21:9021106:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTGTGTGTTTGTGTGTGTGTG	<24>,<26>,<30>,<32>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,6,0,5,3:18:255,198,177,255,162,229,177,0,85,145,239,61,124,130,215	1/2:0,11,5,1,0:18:255,80,30,176,0,128,255,53,150,255,255,68,165,255,255	2/4:0,2,5,1,14:28:255,255,255,255,255,255,255,255,193,255,220,107,0,162,174
-chr21	9022114	chr21:9022114:M	TATATATATACACTTTATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,11:45:90,0,51	0/0:9,3:14:0,3,49	0/1:16,26:59:179,0,26
-chr21	9022146	chr21:9022146:M	TCTCTCTCTCTCTCTCTCTATCTCTCTCT	<13.5>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:5,15,9:40:170,32,4,158,0,255	1/2:1,1,7:12:64,54,56,8,0,85	1/1:4,26,9:65:255,52,0,255,63,255
-chr21	9025188	chr21:9025188:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,8:59:0,49,255	0/0:46,9:68:0,68,255	0/1:26,21:61:76,0,216
-chr21	9027842	chr21:9027842:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:37:255,58,0	1/1:0,23:38:255,83,0	1/1:0,41:55:255,127,0
-chr21	9028014	chr21:9028014:M	TTGTTTTTTTTTGTTTGTTTGTTT	<5.8>,<7.2>	.	.	Motif=TTGT	GT:AD:DP:PL	1/2:0,12,3:19:107,62,47,76,0,230	2/2:0,0,6:8:133,145,166,23,24,0	1/2:4,21,8:35:176,109,109,108,0,255
-chr21	9038074	chr21:9038074:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:206,22,0	1/1:0,1:1:17,3,0	1/1:1,15:19:255,37,0
-chr21	9038270	chr21:9038270:M	TTTTTTTTTTTTTT	<10>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:7,34,20:73:255,29,255,255,0,255	0/1:7,37,16:72:255,0,255,255,3,255	0/1:30,32,9:97:255,0,255,255,255,255
-chr21	9038689	chr21:9038689:M	TTTTTTTTTTTTT	<10>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3,5:21:26,0,255,15,51,87	1/2:1,5,4:12:124,31,107,96,0,100	0/1:29,8,2:40:91,0,255,158,255,255
-chr21	9038885	chr21:9038885:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:164,27,0	0/1:1,0:2:5,0,12	1/1:1,15:16:249,29,0
-chr21	9039487	chr21:9039487:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,18:41:255,0,255	1/1:0,31:45:255,92,0	0/1:27,32:68:255,0,255
-chr21	9040283	chr21:9040283:M	TTTTTTTTTTTTTCTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,16:44:255,126,47,255,0,151	1/1:0,17,0:25:255,66,0,255,59,219	1/2:0,38,26:67:255,202,84,255,0,218
-chr21	9041099	chr21:9041099:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:28:71,0,230	1/1:0,7:11:125,11,0	0/1:21,19:43:228,0,255
-chr21	9041504	chr21:9041504:M	ATATATATATATATATATATATAT	<7.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:9,1,4:20:57,37,255,0,161,138	0/2:6,1,3:12:49,24,172,0,109,96	0/1:13,9,1:29:158,0,255,92,226,255
-chr21	9041527	chr21:9041527:M	TTTTTTTTTTTTTTTT	<11>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,8,2:14:168,0,62,140,38,210	1/2:0,4,3:9:165,80,71,89,0,74	1/1:0,23,0:24:255,56,0,255,69,255
-chr21	9042403	chr21:9042403:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,49:82:255,0,129	0/1:56,31:98:99,0,255	0/1:55,44:109:210,0,255
-chr21	9042798	chr21:9042798:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,20:36:187,0,64	0/1:15,17:32:123,0,98	0/1:10,29:41:253,0,34
-chr21	9044096	chr21:9044096:M	AGGGTTAGGGTTAGGGGTTAGGGTTAGGGTCAGGGGTTAGGGGTCAGGGGTTAGGGGTCAGGGTCAGGGGTCAGGGTCAGGTTCAGGG	<5.8>	.	.	Motif=AGGGTC	GT:AD:DP:PL	1/1:0,21:22:255,65,0	1/1:0,18:19:255,54,0	1/1:1,22:23:255,47,0
-chr21	9045179	chr21:9045179:M	TTGTTGTTGTTGTTGTT	<6.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:46,21:67:53,0,255	0/1:23,14:38:51,0,160	0/0:46,10:59:0,41,255
-chr21	9053749	chr21:9053749:M	ACACACACACACACACACACACACATACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:21,4:27:0,7,248	0/1:6,7:14:70,0,45	0/1:31,8:49:66,0,255
-chr21	9057942	chr21:9057942:M	AAAAAAAGAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,2:11:0,8,72	0/0:17,2:19:0,29,152	0/1:25,10:35:11,0,165
-chr21	9072878	chr21:9072878:M	GGAGGAGGAGAGGAG	<4>	.	.	Motif=GGA	GT:AD:DP:PL	0/1:24,10:34:80,0,255	0/1:4,7:11:87,0,36	0/1:36,14:50:100,0,255
-chr21	9078248	chr21:9078248:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:13,21,18:52:255,22,233,102,0,125	1/2:0,15,20:35:255,198,153,187,0,91	0/1:24,56,5:86:255,0,255,255,235,255
-chr21	9084568	chr21:9084568:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTG	<20.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:21,1,0:29:64,0,255,128,246,255	1/2:1,3,3:8:85,24,72,67,0,84	0/1:11,3,1:17:53,0,218,80,116,190
-chr21	9088788	chr21:9088788:M	TATGTATGTATGTAT	<1.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:8,0:8:0,24,222	.	0/1:2,4:6:91,0,37
-chr21	9088851	chr21:9088851:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:33:168,0,183	0/1:4,13:17:156,0,14	0/1:12,21:33:244,0,98
-chr21	9105777	chr21:9105777:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,62,0	.	1/1:1,15:16:246,29,0
-chr21	9106908	chr21:9106908:M	ACACACACACACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,11:48:160,0,255	0/1:10,15:39:212,0,207	0/1:23,7:43:93,0,255
-chr21	9107926	chr21:9107926:M	TATATATATAT	<3.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:26,1:27:0,59,255	0/1:6,3:9:38,0,102	0/0:44,2:47:0,96,255
-chr21	9110203	chr21:9110203:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:22:0,15,104	1/1:0,4:13:55,15,0	0/0:14,2:29:0,41,203
-chr21	9115662	chr21:9115662:M	AAAAAAAAAAAGAAAAGAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,18:36:227,0,216	1/1:0,18:18:255,53,0	0/1:20,26:47:255,0,238
-chr21	9117865	chr21:9117865:M	AAAAAAAAAAAAATAAAAATAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,12:37:214,0,255	0/1:7,19:27:255,0,122	0/1:41,19:61:255,0,255
-chr21	9121382	chr21:9121382:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:14:13,0,255	1/1:0,5:5:136,15,0	0/1:12,4:17:57,0,255
-chr21	9121528	chr21:9121528:M	AAAAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5,11:31:54,0,255,0,15,59	0/2:3,2,6:17:32,20,203,0,11,23	0/1:18,19,7:47:255,0,255,255,107,255
-chr21	9121942	chr21:9121942:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,18:51:82,0,255	0/1:5,19:27:156,0,18	0/1:36,27:68:155,0,255
-chr21	9124831	chr21:9124831:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:21:65,0,54	1/1:2,7:9:54,2,0	0/0:16,5:21:0,1,121
-chr21	9133336	chr21:9133336:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:5,0,100	0/0:6,0:6:0,16,72	0/0:5,0:8:0,18,77
-chr21	9134281	chr21:9134281:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,25:38:255,0,106	0/1:8,18:26:222,0,56	0/1:31,18:49:162,0,255
-chr21	9134732	chr21:9134732:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:53,20:76:34,0,255	0/1:44,18:65:38,0,255	0/1:72,30:103:77,0,255
-chr21	9134891	chr21:9134891:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,3:25:3,0,255	0/1:4,5:9:102,0,77	0/1:19,9:28:149,0,255
-chr21	9144154	chr21:9144154:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,7,17:42:73,88,255,0,45,142	1/2:1,4,7:12:73,62,108,31,0,48	0/2:18,6,11:35:25,53,255,0,87,159
-chr21	9148728	chr21:9148728:M	AAAAAGAAAAAGGAAAAAAAAAG	<3.7>	.	.	Motif=AAAAAG	GT:AD:DP:PL	0/1:11,20:31:187,0,64	0/1:7,3:10:13,0,68	0/1:11,13:24:111,0,83
-chr21	9149056	chr21:9149056:M	TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTATGTGTGTG	<19>	.	.	Motif=TG	GT:AD:DP:PL	0/0:37,0:39:0,84,255	1/1:1,9:13:105,20,0	0/0:25,4:31:0,26,231
-chr21	9151857	chr21:9151857:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,14:16:135,21,0	1/1:0,0:1:10,3,0	0/1:4,6:12:52,0,13
-chr21	9166200	chr21:9166200:M	TTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,7:15:151,0,159	1/1:0,6:8:153,7,0	0/1:12,4:21:49,0,255
-chr21	9181896	chr21:9181896:M	GTGTGTGTGTATGTGTGTTTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<27>	.	.	Motif=GT	GT:AD:DP:PL	0/1:30,26:61:76,0,141	0/0:19,8:34:0,14,146	0/1:29,16:51:25,0,151
-chr21	9192914	chr21:9192914:M	AAAAAAAAGGAAAAAAGAAAAAGAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,6:19:112,0,255	0/1:6,4:10:83,0,118	0/1:35,5:41:17,0,255
-chr21	9193067	chr21:9193067:M	TCTCTCTCTCTCTCTCT	<7.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:41,2:44:0,86,255	0/1:16,8:27:34,0,134	0/0:73,3:79:0,165,255
-chr21	9246106	chr21:9246106:M	GAATGGAATGGAATGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	1/1:43,549:592:255,255,0	1/1:65,608:673:255,118,0	0/1:68,558:626:255,0,83
-chr21	9246379	chr21:9246379:M	GGAATGGAATGGAAT	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:165,576:759:255,0,255	0/1:176,629:822:255,0,255	0/1:141,588:755:255,0,255
-chr21	9246463	chr21:9246463:M	GAATGGAATTGAATAGAGTGGAATGAAATGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	0/1:135,587:725:255,0,255	0/1:135,645:789:255,0,255	0/1:118,601:727:255,0,255
-chr21	9247746	chr21:9247746:M	AGTGGAGTGGGATGGAGTG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	0/1:252,125:377:255,0,255	0/1:260,148:408:255,0,255	0/1:250,150:400:255,0,255
-chr21	9247991	chr21:9247991:M	GGAATGGAATTGAATGGAGGGGAATGGAATGGGATGGA	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:256,367:639:255,0,255	0/1:213,377:612:255,0,255	0/1:213,374:600:255,0,255
-chr21	9248680	chr21:9248680:M	GGAATGGAACGGATTAGAGTGGAATGGAATGGA	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:89,266:356:255,0,255	0/1:109,277:386:255,0,255	0/1:96,259:355:255,0,255
-chr21	9254015	chr21:9254015:M	TTTGTGTGTGTGTTTGTTTTTTTTTGT	<7.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:1,37:41:255,95,0	0/0:15,0:16:0,44,255	1/1:0,25:32:255,75,0
-chr21	9254039	chr21:9254039:M	TGTGTGTGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,3:9:8,0,142	0/0:24,0:24:0,72,255	0/0:10,2:13:0,14,255
-chr21	9281359	chr21:9281359:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,15:27:255,0,75	0/1:10,7:25:110,0,161	0/1:13,14:45:255,0,180
-chr21	9293315	chr21:9293315:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAA	<8.5>,<11.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,12,5:17:255,63,84,255,0,255	0/1:8,3,1:12:33,0,164,50,85,132	0/1:10,4,0:15:51,0,192,85,123,192
-chr21	9305750	chr21:9305750:M	CACACACACACACACACACACACACACACACACACACAC	<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,21:69:103,0,6	0/1:27,9:74:21,0,98	0/1:12,17:98:38,0,111
-chr21	9306079	chr21:9306079:M	TATATATATATATATATATATATTTATATTTATATTTATATATTTATATTTATATTT	<9.2>,<10.2>	.	.	Motif=TATATT	GT:AD:DP:PL	1/2:1,7,4:15:68,38,34,48,0,106	0/2:0,0,1:2:8,11,17,0,4,2	1/1:3,15,0:19:78,19,0,127,53,255
-chr21	9317326	chr21:9317326:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:51,17:68:77,0,255	0/1:53,17:73:58,0,255	0/0:83,7:90:0,150,255
-chr21	9321493	chr21:9321493:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:11:154,15,0	0/1:22,6:28:17,0,255	1/1:1,20:22:255,38,0
-chr21	9324658	chr21:9324658:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<34>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:80,18,9,57,0,50	1/2:1,2,3:7:84,33,46,31,0,37	1/1:0,6,0:6:143,18,0,132,18,124
-chr21	9332490	chr21:9332490:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:67,10:78:0,87,255	0/1:63,22:86:45,0,255	0/0:111,1:122:0,255,255
-chr21	9333366	chr21:9333366:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:58,61:124:255,0,253	0/1:101,39:145:16,0,255	0/1:49,53:110:255,0,193
-chr21	9345622	chr21:9345622:M	TTTTCATTTTTTTTCCTTTTCTTTTCTTTTCTTTTTTTTTACTTT	<8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:67,37:105:255,0,255	0/1:73,65:141:255,0,255	0/1:104,44:150:255,0,255
-chr21	9352683	chr21:9352683:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:15:130,0,110	0/1:3,7:16:160,0,75	0/0:3,0:4:0,2,72
-chr21	9354167	chr21:9354167:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,15:38:255,0,122	0/1:20,14:43:255,0,255	0/1:15,14:38:255,0,255
-chr21	9355327	chr21:9355327:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:44,87:143:255,0,146	0/1:61,96:165:255,0,255	0/1:108,26:148:47,0,255
-chr21	9356028	chr21:9356028:M	TCTCTCTCTCTCTCTCTCTCT	<12.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:15,1:19:0,31,255	0/0:31,0:47:0,121,255	0/1:27,16:53:146,0,255
-chr21	9357476	chr21:9357476:M	AAAAAAAAAGAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:182,53:250:0,22,255	0/0:182,29:239:0,103,255	0/1:147,61:228:147,0,255
-chr21	9357529	chr21:9357529:M	TTTTTTGTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:100,87:232:255,0,255	0/1:133,54:224:106,0,255	0/1:85,56:187:201,0,255
-chr21	9373555	chr21:9373555:M	AAAAAAAAGAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,11:40:176,0,255	0/0:72,0:73:0,216,255	0/1:13,26:42:255,0,229
-chr21	9376219	chr21:9376219:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16.5>,<17.5>,<18.5>	.	.	Motif=TC	GT:AD:DP:PL	0/3:3,1,2,10:20:255,183,167,81,96,89,0,17,35,43	2/3:1,0,5,4:13:116,72,65,10,21,7,15,20,0,23	1/3:6,8,0,2:20:64,13,21,22,27,95,4,0,104,176
-chr21	9376249	chr21:9376249:M	TATATATATATATATATATATATATATA	<12.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,8,10:27:242,134,128,98,0,44	1/2:0,4,2:10:98,23,7,63,0,47	2/2:0,0,13:39:255,255,255,77,95,0
-chr21	9527280	chr21:9527280:M	TTTTTTTTTTTTTT	<12>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9,6:25:120,0,235,114,42,219	0/1:15,5,1:22:58,0,255,100,149,245	1/2:10,9,16:35:159,69,255,70,0,151
-chr21	9527753	chr21:9527753:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,21:26:255,13,0	0/1:10,27:39:255,0,48	0/1:8,15:24:159,0,63
-chr21	9536364	chr21:9536364:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:42,9:54:47,0,255	0/0:61,0:63:0,182,255	0/1:30,23:57:255,0,255
-chr21	9538526	chr21:9538526:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,2:30:0,55,255	0/1:13,9:22:77,0,140	0/0:19,3:23:0,19,255
-chr21	9538915	chr21:9538915:M	TTTTTTATTTCTTTCTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTT	<54>,<56>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,0,5:14:29,70,255,0,125,84	1/2:1,3,5:9:109,52,111,54,0,46	2/2:4,0,13:20:154,177,255,1,50,0
-chr21	9541066	chr21:9541066:M	TGTGTGTGTGTGAGTGTGCGTATGTGTGTGCGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,6:23:12,0,152	0/0:23,0:23:0,64,255	0/1:14,8:22:39,0,115
-chr21	9541916	chr21:9541916:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,5:29:0,24,196	0/0:22,2:25:0,45,213	0/1:12,13:28:89,0,50
-chr21	9544220	chr21:9544220:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,3,17:38:255,151,213,0,123,206	0/1:11,12,7:32:100,0,44,26,57,209	0/2:31,11,13:56:116,30,201,0,216,255
-chr21	9544541	chr21:9544541:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5:19:19,0,105	0/1:8,7:16:40,0,63	0/1:18,8:27:23,0,155
-chr21	9545072	chr21:9545072:M	GGGGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/1:25,11:43:5,0,174	0/0:12,0:20:0,49,173	0/1:21,22:51:100,0,109
-chr21	9546124	chr21:9546124:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,2,0:10:28,0,97,26,62,69	0/2:11,1,7:20:36,38,216,0,91,59	0/1:6,13,2:23:222,0,56,124,38,128
-chr21	9546599	chr21:9546599:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,4:18:9,0,163	0/0:9,0:11:0,31,154	0/1:17,6:23:24,0,191
-chr21	9547958	chr21:9547958:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:20:30,0,133	0/0:12,1:15:0,28,174	0/1:11,7:19:57,0,101
-chr21	9553153	chr21:9553153:M	TTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,13:20:255,0,77	0/1:0,7:11:163,0,5	0/1:5,4:12:80,0,121
-chr21	9554815	chr21:9554815:M	TTTTTTTTTTTGTTTTTTGTTTTTTTTT	<30>,<31>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,15:30:255,231,146,206,0,120	1/1:0,5,0:5:130,15,0,85,14,71	2/2:0,0,6:6:169,104,87,18,17,0
-chr21	9555114	chr21:9555114:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,20:28:182,0,1	0/1:9,9:18:60,0,60	0/1:4,2:8:24,0,28
-chr21	9568146	chr21:9568146:M	GATGATGATGATG	<5.3>	.	.	Motif=GAT	GT:AD:DP:PL	0/1:19,6:25:3,0,156	0/1:12,7:19:30,0,87	0/0:50,8:58:0,63,255
-chr21	9568474	chr21:9568474:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,13:55:0,9,255	0/0:50,11:61:0,47,255	0/1:32,23:56:91,0,193
-chr21	9576101	chr21:9576101:M	TTTATTTTATTT	<2.2>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/1:38,29:72:128,0,212	0/0:48,14:72:0,8,255	0/1:64,42:106:155,0,255
-chr21	9579077	chr21:9579077:M	TATATATATATATCATAT	<8>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:2,5,4:13:55,12,8,47,0,202	0/1:3,3,2:9:20,0,10,23,14,148	0/0:27,2,1:31:0,48,226,81,255,255
-chr21	9590868	chr21:9590868:M	CTTTTCCTTTTCTTTTTCTTTTTTTTTTTTTTTT	<6.4>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:6,0:6:0,16,61	0/0:2,0:5:0,6,22	1/1:0,6:6:61,16,0
-chr21	9592383	chr21:9592383:M	ACACACACACACACACACACTCACACAGAGACACACACACA	<17.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,9:20:78,122,255,0,134,78	0/0:13,0,3:16:0,47,255,6,177,131	1/2:0,7,21:28:255,255,255,166,0,93
-chr21	9592922	chr21:9592922:M	TTTTTTTTTTATTTTTTATTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:3:0,3,12	1/1:0,1:2:30,3,0	1/1:1,14:15:255,14,0
-chr21	9593108	chr21:9593108:M	TTTTATTTTACTTTTTTTTTTTATT	<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,11:11:97,27,0	1/1:2,16:18:123,27,0	0/0:18,5:23:0,13,114
-chr21	9604526	chr21:9604526:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:1,0,68	0/1:2,3:6:18,0,11	0/0:18,0:18:0,48,200
-chr21	9607114	chr21:9607114:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,1:10:0,16,93	0/1:7,3:11:5,0,60	0/0:25,6:31:0,15,219
-chr21	9610522	chr21:9610522:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:12:0,31,114	0/1:8,6:15:18,0,46	0/0:11,2:16:0,19,103
-chr21	9619746	chr21:9619746:M	TTATTATAATTATTAT	<4.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:30,9:39:57,0,255	0/1:24,11:35:95,0,255	0/0:36,0:36:0,106,255
-chr21	9626221	chr21:9626221:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:48,22:73:141,0,255	1/1:1,12:13:169,22,0	0/0:29,5:35:0,23,255
-chr21	9629089	chr21:9629089:M	ATATACATATATATATAGTATATAT	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:57,0:57:0,164,255	0/1:10,5:15:32,0,106	0/0:49,0:49:0,141,255
-chr21	9657308	chr21:9657308:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,5,0,1:9:102,34,60,78,58,86,85,0,46,123	1/3:0,6,0,6:15:186,116,178,166,171,200,101,0,54,134	2/3:0,1,3,0:6:54,41,42,30,24,23,37,18,0,83
-chr21	9662361	chr21:9662361:M	TTTTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:17,0,12:30:37,121,255,0,181,94	0/0:13,0,1:16:0,29,255,13,135,94	1/2:7,19,7:37:255,3,141,255,0,255
-chr21	9666845	chr21:9666845:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,0,21:36:255,255,255,0,214,113	1/2:1,21,10:36:255,151,200,255,0,255	0/2:21,0,16:50:143,255,255,0,255,255
-chr21	9680860	chr21:9680860:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:15,0:15:0,42,197	0/1:12,18:30:147,0,70	0/0:20,0:23:0,58,255
-chr21	9694961	chr21:9694961:M	ATATATATGTCTATATATATATATACATAT	<14>	.	.	Motif=AT	GT:AD:DP:PL	0/1:11,35:46:255,0,74	0/1:40,16:56:123,0,255	0/1:16,40:56:255,0,133
-chr21	9709049	chr21:9709049:M	GTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:0,0:1:0,0,0	1/1:1,16:17:208,34,0	1/1:0,4:5:70,14,0
-chr21	9709123	chr21:9709123:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:17,6:23:90,0,255	0/0:14,0:14:0,42,255	0/1:10,6:17:111,0,219
-chr21	9709864	chr21:9709864:M	AATAATAATAATAATAAT	<7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:31,0:31:0,88,255	0/0:4,0:5:0,1,42	0/1:11,5:17:22,0,120
-chr21	9709882	chr21:9709882:M	TATATATATATATATATATA	<4.5>,<9>,<11>	.	.	Motif=TA	GT:AD:DP:PL	0/3:10,0,0,15:26:82,159,255,139,255,255,0,114,70,39	2/3:0,0,6,4:11:75,106,255,43,88,60,54,113,0,82	0/1:6,11,0,0:19:255,0,123,255,50,255,255,64,255,255
-chr21	9709901	chr21:9709901:M	AGAGAGAGAGAGAGAGAGA	<11.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,10:34:162,0,242	0/0:15,0:16:0,44,255	0/1:12,5:24:68,0,203
-chr21	9712972	chr21:9712972:M	ACACACACACACACACACACACACACACAC	<13>,<14>,<16>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,3,0,11:16:151,114,255,154,234,242,64,0,41,57	0/2:20,0,9,5:34:10,84,255,0,255,186,45,255,119,255	1/3:2,9,0,14:25:255,136,255,231,255,255,164,0,96,183
-chr21	9722805	chr21:9722805:M	AACAACAACAACAACAACAACAA	<5.7>,<9.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/2:0,20,40:66:255,255,255,255,0,255	0/2:40,11,15:74:202,198,255,0,255,255	0/2:37,0,22:62:255,255,255,0,255,255
-chr21	9724209	chr21:9724209:M	ACACACACACACACACACACACACACACACACACACAC	<16>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,16,15:52:255,12,239,124,0,121	0/1:12,21,10:61:255,0,217,255,15,246	0/1:11,13,0:54:163,0,255,170,235,255
-chr21	9727768	chr21:9727768:M	AAAAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,25:35:255,255,255,76,95,0	0/2:9,13,8:46:111,95,209,0,13,255	0/2:14,1,11:41:205,255,255,0,161,255
-chr21	9742111	chr21:9742111:M	AAGTGAAGTGA	<2.4>	.	.	Motif=AAGTG	GT:AD:DP:PL	1/1:17,72:89:255,79,0	0/0:79,29:108:0,38,255	0/0:75,31:106:0,19,255
-chr21	9746229	chr21:9746229:M	TTTTTTTTTTTTTTTTTT	<16>,<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:7,7,25,8:48:171,103,255,6,65,16,218,152,0,255	2/3:5,2,11,8:27:79,76,245,27,110,70,76,76,0,164	1/2:5,14,28,1:50:255,123,172,69,0,7,255,215,104,255
-chr21	9746593	chr21:9746593:M	GTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,59:76:255,0,225	0/1:27,81:109:255,0,255	0/1:23,75:101:255,0,255
-chr21	9755719	chr21:9755719:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:52,30:84:204,0,255	0/1:23,41:65:255,0,138	0/1:24,40:82:255,0,255
-chr21	9761944	chr21:9761944:M	TGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,12,8:38:255,0,255,92,255,255	0/2:10,6,15:34:255,118,255,0,163,206	0/1:16,19,7:58:255,0,255,213,255,255
-chr21	9764569	chr21:9764569:M	CACACACACACACACACACACACACCACACACACA	<19.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:14,13,14:52:255,196,255,0,47,255	0/2:13,14,16:59:255,156,240,0,20,255	1/2:14,28,9:62:255,24,96,156,0,255
-chr21	9765079	chr21:9765079:M	TATATATATATATATATATATATATATATATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,34:58:255,0,141	1/1:0,20:23:255,58,0	0/1:0,18:31:255,0,2
-chr21	9775731	chr21:9775731:M	TTTCTTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<10.2>,<15.5>,<16.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,7,7,2:31:255,226,255,178,0,148,215,60,141,211	1/3:0,20,5,6:50:255,255,255,255,21,255,255,0,255,255	2/3:0,0,11,9:36:255,255,255,111,138,32,128,191,0,92
-chr21	9775782	chr21:9775782:M	TTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,6:55:8,0,255	0/1:38,9:49:111,0,255	0/1:47,29:78:255,0,255
-chr21	9785414	chr21:9785414:M	TTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3,0:6:57,50,120,0,71,59,49,70,26,61	2/3:2,0,2,3:9:55,64,172,12,87,64,18,35,0,14	1/3:1,4,2,3:16:164,39,124,75,45,106,117,0,59,109
-chr21	9791326	chr21:9791326:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,83:107:255,0,77	1/1:16,91:107:255,55,0	0/1:38,51:90:255,0,255
-chr21	9794599	chr21:9794599:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:12,27,14:54:255,1,97,144,0,119	1/2:9,19,30:58:255,126,202,89,0,26	1/1:7,40,0:49:255,20,0,255,61,255
-chr21	9794759	chr21:9794759:M	AAAAAAAAAATAAAAAAAAAAAAAA	<14>,<16>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,2,2,10:36:255,89,220,218,227,255,252,0,129,222	1/3:0,13,3,4:30:255,37,48,208,49,229,255,0,171,255	0/2:4,0,6,1:20:137,60,185,0,119,126,130,73,14,145
-chr21	9794783	chr21:9794783:M	ATATATATATATATATATATACATATATA	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,4:23:60,0,183	0/1:4,5:9:92,0,72	0/1:6,6:21:112,0,124
-chr21	9820677	chr21:9820677:M	ACACACACACAGACACACACACACACACACACACACACAC	<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	0/2:39,88,81:268:255,107,61,0,14,255	0/1:44,89,39:234:255,0,75,153,240,255	0/2:24,35,41:185:255,105,255,0,255,255
-chr21	9823502	chr21:9823502:M	AGACACACACACAGACACA	<2.8>	.	.	Motif=AGACAC	GT:AD:DP:PL	0/1:127,61:188:232,0,255	0/0:188,54:242:0,3,255	0/1:100,46:148:163,0,255
-chr21	9827726	chr21:9827726:M	ACACACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,22:43:92,0,24	0/0:23,10:42:0,20,152	1/1:6,17:33:125,17,0
-chr21	9833357	chr21:9833357:M	ACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,13:17:193,0,9	0/1:13,15:31:203,0,178	0/1:2,10:13:151,0,2
-chr21	9837570	chr21:9837570:M	ACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,2:15:50,0,246	0/1:9,6:15:142,0,193	0/1:12,7:19:149,0,255
-chr21	9838981	chr21:9838981:M	ACACAGACACACTCACACACACACACACACACACACACA	<18.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:20,8,12:40:99,121,255,0,104,255	0/2:31,1,7:43:8,87,255,0,252,255	1/2:16,16,12:49:105,51,173,21,0,255
-chr21	9851709	chr21:9851709:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,20:27:255,0,6	0/1:8,6:16:71,0,111	0/1:9,5:17:78,0,124
-chr21	9854366	chr21:9854366:M	TTTGTTTGTTTTTTTG	<5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:35,79:116:255,0,91	1/1:20,84:104:255,61,0	0/1:56,62:119:255,0,255
-chr21	9855936	chr21:9855936:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:53,36:90:223,0,255	0/1:65,19:84:11,0,255	0/1:36,54:90:255,0,219
-chr21	9858104	chr21:9858104:M	ATATATATATATATATATATATATATATATATATATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,31:37:255,109,0	1/1:0,21:22:255,66,0
-chr21	9873956	chr21:9873956:M	AAACAAACAAACAAACAAACAAACAAACAAAC	<7>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:14,91:106:255,119,0	1/1:17,95:112:255,102,0	1/1:20,105:126:255,101,0
-chr21	9874574	chr21:9874574:M	CACACACACACACACACACACACACACACACACACACACACACACACACACA	<19>,<21>,<23>,<24>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,8,7,4:19:255,255,255,128,161,110,116,96,0,63,198,138,19,78,151	3/4:0,0,0,8,9:19:255,255,255,236,255,255,73,64,59,23,81,64,50,0,29	0/1:3,7,4,0,0:18:214,0,83,43,55,125,177,79,133,243,208,56,101,231,247
-chr21	9878731	chr21:9878731:M	TTTTTTTCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,20,24:53:255,214,108,178,0,71	2/2:0,0,24:33:255,255,231,74,65,0	1/2:0,21,38:61:255,255,193,226,0,48
-chr21	9878921	chr21:9878921:M	TTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:16,30,7:64:255,93,187,161,0,255	1/2:0,32,28:65:255,255,255,255,0,255	0/1:40,36,2:78:179,0,237,255,255,255
-chr21	9884757	chr21:9884757:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,17:45:70,0,48	0/1:0,11:19:49,0,2	1/1:5,27:46:198,39,0
-chr21	9884923	chr21:9884923:M	AAAATAAAATAAAATAAA	<2.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:56,20:76:255,0,255	0/1:29,11:40:188,0,255	0/0:75,0:75:0,225,255
-chr21	9888581	chr21:9888581:M	TTTTTCTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,11:33:10,0,94	0/1:15,10:36:12,0,95	0/0:33,1:40:0,75,255
-chr21	9893417	chr21:9893417:M	ACACACACACACACACACACACACGCCACACAC	<14.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,29,15:89:255,0,236,255,53,255	1/2:18,29,25:85:197,22,255,218,0,255	1/1:1,28,0:98:255,159,0,255,153,255
-chr21	9894712	chr21:9894712:M	AAAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,39,15:74:255,0,255,229,180,255	1/1:9,69,3:82:255,2,0,255,102,255	1/2:0,63,47:110:255,255,166,255,0,255
-chr21	9907030	chr21:9907030:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,26:69:100,0,139	0/1:22,23:61:92,0,145	0/1:11,16:46:59,0,96
-chr21	9908432	chr21:9908432:M	ATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTA	<9>,<11>,<15>	.	.	Motif=ATCT	GT:AD:DP:PL	1/3:0,31,15,15:70:255,255,255,255,250,255,255,0,248,255	1/2:0,27,22,0:63:255,255,232,255,0,255,255,162,239,255	1/3:0,21,0,15:53:255,255,255,255,255,255,255,0,255,255
-chr21	9917528	chr21:9917528:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:5,37,9:52:255,37,38,255,0,255	1/2:1,25,17:44:255,146,203,231,0,255	0/1:20,22,2:46:121,0,101,219,139,255
-chr21	9923070	chr21:9923070:M	ACACACACACACACACACACACACA	<8.5>,<10.5>,<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:25,23,15,13:77:255,0,255,178,254,255,255,14,255,255	0/3:31,0,23,34:89:255,255,255,51,255,255,0,255,103,129	1/3:1,19,31,23:95:255,255,255,37,38,243,255,0,50,255
-chr21	9932468	chr21:9932468:M	AAAAAAACAAACAAACAAACAAAAAAAAACAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/1:65,16:81:123,0,255	0/1:62,13:75:68,0,255	0/1:33,53:86:255,0,255
-chr21	9939035	chr21:9939035:M	ATATATATGTTATTATATATGTTATATATATATATATAATATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:35,9:44:112,0,255	0/1:19,14:33:255,0,255	0/1:17,36:53:255,0,255
-chr21	9948821	chr21:9948821:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,5:50:0,21,255	0/0:42,0:58:0,130,255	0/1:36,14:52:208,0,255
-chr21	9949904	chr21:9949904:M	AAAATAAAATAAAA	<3.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:53,65:118:255,0,255	0/1:45,75:120:255,0,255	0/1:75,63:138:255,0,255
-chr21	9956781	chr21:9956781:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:42,23:85:177,0,255	0/1:20,27:61:255,0,113	0/1:62,47:115:255,0,255
-chr21	9963353	chr21:9963353:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:41,29:73:130,0,255	0/1:28,43:73:255,0,104	0/0:56,5:70:0,125,255
-chr21	9969989	chr21:9969989:M	TGTGTGCGTGTATGTGTGTGTGTGTGT	<12.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:37,16,18:90:255,255,255,0,222,255	1/2:20,31,19:78:255,228,255,128,0,255	0/2:33,1,34:69:255,255,255,0,255,255
-chr21	9984660	chr21:9984660:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,57:86:255,0,204	1/1:15,82:98:255,54,0	0/1:25,82:108:255,0,77
-chr21	9989193	chr21:9989193:M	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTGTCTCCCTCTCTCTCTCT	<26.5>,<27.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:8,11,3:26:173,0,98,91,51,113	1/2:0,11,10:25:255,79,41,127,0,69	0/0:10,0,1:18:0,30,195,19,119,91
-chr21	9992425	chr21:9992425:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:33,17:55:74,0,247	0/1:31,11:45:20,0,235	0/1:37,16:59:23,0,255
-chr21	9994453	chr21:9994453:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3,4:25:101,0,184,19,112,115	1/2:2,13,6:36:255,31,3,152,0,102	1/2:1,9,5:20:255,31,22,72,0,39
-chr21	9997462	chr21:9997462:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,0:1:0,0,0	1/1:0,3:3:38,8,0
-chr21	10001908	chr21:10001908:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,30,27:58:255,225,154,255,0,177	1/1:2,42,12:57:255,92,0,255,1,255	1/2:0,33,19:54:255,169,64,255,0,239
-chr21	10003301	chr21:10003301:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:55,19:74:133,0,255	0/1:56,28:85:241,0,255	0/1:31,51:84:255,0,255
-chr21	10004043	chr21:10004043:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:55,32,2:91:255,0,255,255,255,255	0/1:37,39,4:85:255,0,255,255,255,255	1/2:13,40,23:78:255,69,195,255,0,255
-chr21	10018178	chr21:10018178:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,14:41:54,0,170	0/1:30,16:49:44,0,213	0/1:25,15:44:46,0,193
-chr21	10021513	chr21:10021513:M	AAATAAATAAATAAATAAATAAATAAATGAAAT	<10.2>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:57,5:64:0,66,255	0/1:38,13:51:164,0,255	0/0:55,0:66:0,165,255
-chr21	10023756	chr21:10023756:M	AAAAAAAACAAAACAA	<3>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:34,9:43:0,25,230	0/1:13,12:25:48,0,57	0/0:49,7:57:0,79,255
-chr21	10028361	chr21:10028361:M	TTTTTTTTTTTTTTT	<16>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:30,15,14,5:65:213,57,203,0,181,255,126,255,255,255	1/3:12,14,9,15:53:255,219,212,92,94,212,39,0,168,255	0/2:31,18,22,3:77:255,93,235,0,183,255,230,255,255,255
-chr21	10034590	chr21:10034590:M	AAAAGAAAAAAAAAAAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:39,10:50:42,0,255	0/1:17,18:35:205,0,188	0/0:47,1:48:0,123,255
-chr21	10039657	chr21:10039657:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:19,4,4:27:30,7,183,0,204,255	1/2:0,8,3:11:145,38,8,82,0,73	0/1:21,13,0:34:75,0,180,138,255,255
-chr21	10044280	chr21:10044280:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,7,9:26:142,36,80,0,46,158	1/1:3,26,5:35:255,53,0,221,36,255	0/1:9,16,7:33:167,0,19,63,26,215
-chr21	10052192	chr21:10052192:M	TATATATATATACGCATATATATATACACATATATATA	<4>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,7:31:118,0,255	0/1:17,6:24:77,0,255	0/0:15,1:18:0,4,255
-chr21	10069359	chr21:10069359:M	ACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:30,12:46:158,0,255	0/1:15,12:31:193,0,255	0/0:47,0:48:0,140,255
-chr21	10079378	chr21:10079378:M	GAGAGAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:76,13:89:0,13,255	0/1:57,22:80:173,0,255	0/1:56,33:89:255,0,255
-chr21	10081399	chr21:10081399:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,5:41:0,46,255	0/1:14,7:22:43,0,126	0/0:22,0:22:0,62,255
-chr21	10081542	chr21:10081542:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTTATCATCTATCTATTTATCATCTATCTATC	<16.5>,<19.5>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,1,9:10:81,91,203,19,5,0	2/2:0,0,5:5:48,62,126,13,15,0	1/2:0,3,2:5:60,19,36,53,0,61
-chr21	10082927	chr21:10082927:M	TTTTCTTTTGCTTTCTTTTGTTTTTTTT	<5.4>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:61,2:63:0,151,255	0/0:44,0:44:0,125,255	0/1:63,28:92:146,0,255
-chr21	10094384	chr21:10094384:M	AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:9:1,0,66	0/1:5,3:10:20,0,46	0/0:7,1:8:0,9,78
-chr21	10095588	chr21:10095588:M	TTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTGTTTTTG	<6.2>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:22,6:28:106,0,255	0/0:28,0:28:0,84,255	0/1:16,10:26:239,0,255
-chr21	10098968	chr21:10098968:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:25:0,69,255	0/0:35,0:35:0,96,255	0/1:22,8:30:16,0,188
-chr21	10100032	chr21:10100032:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,9:41:1,0,235	0/1:21,15:40:61,0,157	0/0:50,13:65:0,19,255
-chr21	10105041	chr21:10105041:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:20:17,0,81	0/1:5,2:9:7,0,35	0/0:11,0:17:0,14,109
-chr21	10106363	chr21:10106363:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:18:255,20,0	1/1:1,9:13:200,6,0	0/1:1,1:6:32,0,15
-chr21	10108527	chr21:10108527:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,5:11:76,0,39	0/1:6,7:19:87,0,108	0/0:14,0:16:0,41,248
-chr21	10110321	chr21:10110321:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:45,21:66:194,0,255	0/1:31,20:52:198,0,255	0/0:55,0:55:0,162,255
-chr21	10118947	chr21:10118947:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<18>	.	.	Motif=GA	GT:AD:DP:PL	0/1:8,10:26:98,0,119	0/1:0,15:32:255,0,9	0/0:9,0:25:0,40,214
-chr21	10122154	chr21:10122154:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,5:48:0,4,255	0/1:26,15:41:255,0,255	0/0:51,0:54:0,156,255
-chr21	10122778	chr21:10122778:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,4:12:19,19,75,0,11,40	0/1:3,3,0:7:17,0,18,30,23,75	0/0:12,0,2:15:0,39,161,9,114,105
-chr21	10123588	chr21:10123588:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:5,10,18:35:178,151,255,67,0,135	1/2:6,12,8:27:95,39,118,71,0,182	2/2:2,0,21:23:202,255,255,40,62,0
-chr21	10124207	chr21:10124207:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:13:168,15,0	1/1:0,16:24:255,53,0	1/1:2,16:24:255,24,0
-chr21	10135895	chr21:10135895:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:16:13,0,84	0/1:3,7:10:56,0,8	0/1:8,4:15:29,0,66
-chr21	10138622	chr21:10138622:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,4:49:0,78,255	0/0:25,1:30:0,51,255	0/1:31,11:43:29,0,255
-chr21	10149470	chr21:10149470:M	AATAAATAAATAAATAAATAA	<6.2>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:21,18:39:126,0,164	0/1:20,15:35:94,0,157	0/0:47,0:47:0,131,255
-chr21	10165429	chr21:10165429:M	TATATATGTATATTATACATATATATGCATGTATATATATGAATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:22,20:42:255,0,255	0/1:32,15:47:255,0,255	0/1:19,15:34:255,0,255
-chr21	10270636	chr21:10270636:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:45,7:53:0,71,255	0/1:30,11:41:15,0,255	0/0:31,9:40:0,7,255
-chr21	10270664	chr21:10270664:M	ATATATAATATATATCATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,7:45:0,48,255	0/1:21,11:32:42,0,255	0/1:21,9:30:23,0,255
-chr21	10271575	chr21:10271575:M	ATATCTATAATATATATTATATATATTTTATATTATATTATCTATACTTAAATATATATATAAATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:7,12:19:94,0,134	0/1:1,4:5:36,0,13	0/1:2,5:7:42,0,34
-chr21	10272705	chr21:10272705:M	ATATAATATACATTATTATATATTATATATGAAATTATATAATATAATTATATTTAATATAAGATATATATAATATGATATATAACATATATAATATA	<27>	.	.	Motif=ATATA	GT:AD:DP:PL	1/1:0,11:11:138,31,0	1/1:0,2:2:25,6,0	1/1:0,15:15:188,42,0
-chr21	10273835	chr21:10273835:M	TATATTATTATATATTATTATATTATATATAATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,58:69:255,0,104	1/1:0,29:29:255,80,0	1/1:1,46:47:255,103,0
-chr21	10273898	chr21:10273898:M	TATATATATGTTATATATATTAAATATATAATTAATATCTGTAATATATATAACATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,27:41:223,0,188	0/1:4,14:19:120,0,56	0/1:3,20:23:181,0,16
-chr21	10325022	chr21:10325022:M	ATAATATTATATAATATATAATAATATTAAATTAAATAATAATTATAATA	<17.7>	.	.	Motif=ATA	GT:AD:DP:PL	1/1:0,6:7:102,18,0	.	.
-chr21	10327150	chr21:10327150:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:39,85:167:255,0,255	0/1:30,108:165:255,0,255	0/1:36,50:170:255,0,255
-chr21	10327672	chr21:10327672:M	TTTTTTGTTTTTTTGTTTTTGTTTTTTGTTTTTT	<35>,<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:30,32,17:105:255,0,255,80,47,255	1/2:21,44,41:130:255,255,255,255,0,255	0/1:72,39,20:146:255,0,255,108,255,255
-chr21	10331685	chr21:10331685:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:165,58:227:255,0,255	0/1:122,80:212:255,0,255	0/1:132,32:198:41,0,255
-chr21	10334325	chr21:10334325:M	ATATATATATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:56,14:77:0,24,255	0/1:21,22:58:135,0,186	0/0:64,16:89:0,28,255
-chr21	10334340	chr21:10334340:M	TTTTTTTTTCTTTCTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:54,15:71:193,0,255	0/0:36,0:38:0,113,255	0/1:38,22:69:255,0,255
-chr21	10334799	chr21:10334799:M	TTTTTTCTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:49,21:72:255,0,255	0/1:50,13:67:155,0,255	0/1:65,23:93:255,0,255
-chr21	10336724	chr21:10336724:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,10,14:45:255,79,255,0,240,255	0/2:11,10,12:39:255,20,228,0,120,255	0/1:17,14,11:50:255,0,255,38,252,255
-chr21	10340305	chr21:10340305:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:127,13,51:196:255,255,255,0,255,255	0/2:91,17,62:175:255,255,255,0,255,255	0/1:88,52,19:161:255,0,255,255,255,255
-chr21	10341491	chr21:10341491:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:59,76:184:255,0,255	0/1:31,123:179:255,0,255	0/1:90,15:168:39,0,255
-chr21	10348141	chr21:10348141:M	AAAAACAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:67,101,39:210:255,0,255,255,255,255	0/1:53,106,28:189:255,0,255,255,255,255	1/2:19,116,50:189:255,255,255,255,0,255
-chr21	10348506	chr21:10348506:M	AAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:73,48,33:160:255,0,255,250,255,255	0/2:66,39,56:164:255,255,255,0,255,255	0/1:73,47,35:157:255,0,255,197,255,255
-chr21	10353496	chr21:10353496:M	TTTTTTTTGTTTTTTTTTTGTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:35,82:161:255,0,255	0/1:35,56:141:255,0,255	0/1:35,66:134:255,0,255
-chr21	10355841	chr21:10355841:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,29,2:59:255,17,0,255,59,255	1/1:1,43,3:63:255,106,0,255,84,255	1/2:5,13,14:40:255,98,168,82,0,152
-chr21	10357174	chr21:10357174:M	TATATATATATGTATATA	<10>,<12>	.	.	Motif=TA	GT:AD:DP:PL	0/1:92,52,28:190:255,0,255,56,255,255	0/2:47,17,24:88:255,255,255,0,255,255	0/1:72,43,21:146:255,0,255,120,255,255
-chr21	10357635	chr21:10357635:M	CTTTCTTTCTTT	<1.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:22,8:34:180,0,255	0/1:26,11:39:214,0,255	0/0:28,3:33:0,8,255
-chr21	10367657	chr21:10367657:M	CACACACACACACACACACACACACACAGACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/1:34,45:198:255,0,255	0/1:43,61:210:255,0,255	0/1:25,18:172:255,0,255
-chr21	10370540	chr21:10370540:M	CTAGCTAGCTAGCT	<2.5>	.	.	Motif=CTAG	GT:AD:DP:PL	0/1:183,86:269:255,0,255	0/1:152,71:223:255,0,255	0/1:167,83:250:255,0,255
-chr21	10370588	chr21:10370588:M	TCTACTATATATCCATCATCTATCTATTATCCATCCATCTATCCATCTATCTATATATGTATTTATCTAT	<16.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:45,20:74:47,0,255	0/0:50,16:72:0,2,255	0/0:51,13:81:0,29,255
-chr21	10370708	chr21:10370708:M	CTAGCTAGCTAGCT	<2.5>	.	.	Motif=CTAG	GT:AD:DP:PL	0/1:137,55:197:112,0,255	0/1:140,51:198:79,0,255	0/0:150,44:201:0,0,255
-chr21	10370723	chr21:10370723:M	TCTATCTATCTACCTATC	<3.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:53,47:108:255,0,255	0/1:58,53:117:255,0,255	0/1:70,47:134:255,0,255
-chr21	10372020	chr21:10372020:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:76,126:248:255,0,255	0/1:77,138:231:255,0,255	0/1:80,74:193:255,0,255
-chr21	10372841	chr21:10372841:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:37:44,0,61	0/1:4,14:30:63,0,34	0/1:8,5:22:3,0,52
-chr21	10376581	chr21:10376581:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,80:127:255,0,37	0/1:16,61:110:255,0,112	0/1:20,73:119:255,0,157
-chr21	10377648	chr21:10377648:M	TTTTTTTTCTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:42,31:77:92,0,228	0/1:34,28:63:97,0,160	0/0:72,25:98:0,17,255
-chr21	10379736	chr21:10379736:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:55,18:76:0,17,255	0/1:45,20:66:26,0,255	0/0:80,16:103:0,108,255
-chr21	10381537	chr21:10381537:M	ACACACACACGCATACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:42,38:80:255,0,255	0/1:31,45:78:255,0,255	0/1:64,22:87:255,0,255
-chr21	10381570	chr21:10381570:M	ACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:55,48:104:255,0,255	0/1:37,67:105:255,0,255	0/1:67,39:106:255,0,255
-chr21	10382554	chr21:10382554:M	AAAAAAAAAAAAACAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:31,7:64:34,0,255	0/1:25,11:41:154,0,255	0/1:37,14:95:171,0,255
-chr21	10382572	chr21:10382572:M	AAGAAGAAGAAGAAAGAAAGAAAACAAAAAAGAAGAAGAAGAAAGAAAGAAAAAAAAGAAAAGAA	<22.3>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,10:18:119,34,0	1/1:0,9:17:77,22,0	1/1:0,9:21:121,35,0
-chr21	10382937	chr21:10382937:M	AAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:3,8,25:57:255,57,126,21,7,0	0/2:4,0,35:72:255,156,255,0,110,18	0/1:1,25,12:64:255,0,124,87,64,115
-chr21	10386555	chr21:10386555:M	AATTAATTAATTAA	<2.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:58,94:153:255,0,255	0/1:35,115:150:255,0,194	0/1:62,108:171:255,0,255
-chr21	10386619	chr21:10386619:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,78:78:255,231,0	1/1:2,63:65:255,155,0	1/1:0,94:94:255,255,0
-chr21	10386831	chr21:10386831:M	TTTTTTGTTTTTTGGTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,15:46:102,0,255	0/0:35,0:39:0,100,255	0/1:22,29:57:255,0,187
-chr21	10387432	chr21:10387432:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:92,38:150:78,0,255	0/1:78,39:122:38,0,255	0/0:115,26:165:0,27,255
-chr21	10388268	chr21:10388268:M	AGGAGGAGGAGGAGGAGCGGGAGGAGCAGGAGGAG	<10.7>	.	.	Motif=AGG	GT:AD:DP:PL	0/1:23,13:47:28,0,120	0/1:18,12:34:33,0,88	0/0:40,12:56:0,21,255
-chr21	10388964	chr21:10388964:M	AAAAATAAAAATAAAAATAAA	<4.5>	.	.	Motif=AAAAAT	GT:AD:DP:PL	0/1:163,35:202:82,0,255	0/1:128,26:160:9,0,255	0/1:141,68:210:255,0,255
-chr21	10392835	chr21:10392835:M	TGTTTTTTGTTTGTTTTTGTATTTTTGTTTTTTTGTTTTTGT	<6.7>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/1:66,83:158:255,0,255	0/1:66,72:138:255,0,255	0/1:63,52:119:255,0,255
-chr21	10395953	chr21:10395953:M	TCTCTGTCTCCCTCTCTCTCTCTGTCTGTCTCTGTTTCTGCTTCTCTGTCTCCATCTCTTTCTCTCTCTGTGTCTCTCT	<11.7>,<12.5>	.	.	Motif=TCTCTC	GT:AD:DP:PL	0/2:10,4,7:22:95,57,255,0,112,147	0/1:4,7,2:14:122,0,76,96,38,155	0/1:14,7,3:24:93,0,255,78,205,255
-chr21	10396039	chr21:10396039:M	TCTCTGTCTCTGTCTTTCTCTCCATCTCTGTATCTGTC	<7>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/1:0,16:16:249,46,0	1/1:0,11:11:171,32,0	1/1:0,17:17:255,49,0
-chr21	10398128	chr21:10398128:M	AAAACAAAACAAA	<1.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:135,71:206:255,0,255	0/1:110,75:185:255,0,255	0/1:123,51:174:255,0,255
-chr21	10398226	chr21:10398226:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:60,8:96:0,98,255	0/1:52,25:92:188,0,255	0/0:75,3:107:0,255,255
-chr21	10399238	chr21:10399238:M	TTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,21:63:255,0,27	0/1:3,20:71:255,0,71	0/1:8,25:64:255,0,248
-chr21	10401726	chr21:10401726:M	CAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCA	<9.4>	.	.	Motif=CAAAC	GT:AD:DP:PL	1/1:13,66:122:255,153,0	1/1:19,35:110:255,73,0	1/1:10,65:103:255,134,0
-chr21	10403944	chr21:10403944:M	TTTTATTTATTTTGTTTTACTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<12.6>,<13.4>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:2,12,0:18:107,16,0,123,37,174	1/2:0,8,4:12:137,49,18,71,0,69	1/1:3,22,0:30:205,36,0,226,63,255
-chr21	10404536	chr21:10404536:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:46,15:62:92,0,255	0/1:42,28:71:255,0,255	0/0:77,9:87:0,95,255
-chr21	10405054	chr21:10405054:M	AACAACAACAACAACAACAACAACAACAAAAAACAAAGAAAACAAACAACAACAA	<18>,<19.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/2:9,3,16:35:75,105,255,0,59,64	1/2:0,8,14:32:150,90,255,84,0,127	0/2:10,2,32:56:205,255,255,0,86,8
-chr21	10405906	chr21:10405906:M	ATTTTATTTATTTTAATTTTATTTTTTTT	<5.6>	.	.	Motif=ATTTT	GT:AD:DP:PL	0/1:24,25:56:51,0,17	1/1:0,44:54:251,93,0	0/0:51,13:72:0,30,147
-chr21	10406088	chr21:10406088:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:21,13:58:247,0,255	0/1:22,19:64:255,0,255	0/1:21,9:77:255,0,255
-chr21	10411695	chr21:10411695:M	AAAACCAAACCAAACTAAACCAAAACAAAAAAAAC	<6.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:52,25:92:21,0,74	0/1:26,32:59:41,0,20	0/0:75,11:95:0,70,238
-chr21	10415921	chr21:10415921:M	AAAACAAAACAAAACAAAACAAAAC	<4>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:47,214:262:255,225,0	1/1:28,218:246:255,255,0	1/1:55,204:260:255,148,0
-chr21	10418381	chr21:10418381:M	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:22,24:164:255,0,255	0/1:10,27:102:255,0,255	0/1:3,35:143:255,0,255
-chr21	10420350	chr21:10420350:M	TTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,41:62:255,0,184	0/1:5,30:37:255,0,35	0/1:12,38:60:255,0,190
-chr21	10422009	chr21:10422009:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:50,97:147:255,0,82	1/1:9,138:147:255,255,0	0/1:50,88:138:255,0,103
-chr21	10422126	chr21:10422126:M	TTTTTTTTTTTTTTT	<13>,<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/3:7,25,39,14:110:255,238,255,193,255,255,255,99,0,255	1/3:10,26,15,26:94:255,202,255,255,255,255,255,0,69,255	1/3:4,35,33,15:117:255,217,255,255,255,255,255,0,25,255
-chr21	10423314	chr21:10423314:M	TATATATATATTTATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:167,77:244:255,0,255	0/1:114,89:203:255,0,255	0/1:182,44:226:146,0,255
-chr21	10425218	chr21:10425218:M	TTTTTTTTTTCTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:91,86,93:272:255,141,183,0,114,255	1/1:89,116,84:292:255,7,0,77,49,255	0/1:127,72,37:239:240,0,255,183,255,255
-chr21	10427526	chr21:10427526:M	ACACACACACACAAACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:138,167:313:255,0,255	0/1:228,140:371:255,0,255	0/1:173,180:360:255,0,255
-chr21	10431007	chr21:10431007:M	TTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:69:255,84,0	1/1:1,36:87:255,187,0	0/1:2,13:44:255,0,4
-chr21	10431777	chr21:10431777:M	TCTCTCTCTCT	<3.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:168,90:330:255,0,255	0/1:184,70:339:175,0,255	0/0:260,34:335:0,255,255
-chr21	10434161	chr21:10434161:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:11,84:163:255,128,0	1/1:14,107:218:255,255,0	1/1:9,101:198:255,112,0
-chr21	10434867	chr21:10434867:M	TTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.8>,<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:11,16,21:64:159,103,244,90,0,206	0/2:16,0,19:45:92,171,255,0,100,48	1/2:0,25,20:51:255,159,213,210,0,255
-chr21	10435892	chr21:10435892:M	TATTATTATTA	<2.7>	.	.	Motif=TAT	GT:AD:DP:PL	0/1:220,46:266:106,0,255	0/1:212,65:277:255,0,255	0/1:201,77:278:255,0,255
-chr21	10437769	chr21:10437769:M	ATATATATATATATATATATATATATA	<10.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,4,9:41:157,0,70,133,63,255	1/2:0,2,5:12:133,45,27,99,0,124	1/1:1,14,2:38:255,3,0,255,73,255
-chr21	10439737	chr21:10439737:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,58:108:255,0,72	1/1:1,75:109:255,116,0	0/1:29,43:98:255,0,180
-chr21	10439930	chr21:10439930:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:11,17,41:73:255,244,163,37,0,40	0/2:33,9,32:79:255,175,247,0,162,255	1/2:3,21,37:75:255,255,186,101,0,22
-chr21	10445599	chr21:10445599:M	CTTTCTTTTCTTACTTTCTTT	<2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:50,12:65:171,0,255	0/1:36,16:56:255,0,255	0/1:68,9:81:144,0,255
-chr21	10446180	chr21:10446180:M	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	<3.7>,<4.7>	.	.	Motif=TTTGTT	GT:AD:DP:PL	1/2:17,34,91:142:255,255,255,255,0,255	1/2:15,55,75:145:255,255,255,255,0,255	2/2:13,18,116:147:255,255,255,234,74,0
-chr21	10447391	chr21:10447391:M	TTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:47:255,111,0	1/1:0,14:31:255,67,0	1/1:0,6:44:255,72,0
-chr21	10447576	chr21:10447576:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,47:152:255,0,255	0/1:12,43:118:255,0,255	0/1:36,40:132:255,0,255
-chr21	10449373	chr21:10449373:M	ATATATATGTATGTATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:0,77:156:255,0,255	0/1:1,111:171:255,0,255	0/1:0,78:161:255,0,255
-chr21	10449701	chr21:10449701:M	AAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,73:138:255,0,1	1/1:0,81:129:255,255,0	0/1:48,32:124:255,0,255
-chr21	10451234	chr21:10451234:M	TTTTTTTTTTTTT	<11>,<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/3:11,22,52,46:134:255,255,255,255,255,255,255,237,0,255	1/2:6,45,75,14:145:255,255,255,214,0,46,255,255,191,255	2/3:13,45,48,43:155:255,186,255,236,255,255,255,22,0,255
-chr21	10456321	chr21:10456321:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,12,2:20:255,0,34,70,36,85	1/2:2,9,5:18:255,1,23,25,0,25	1/1:1,11,1:20:255,10,0,106,20,86
-chr21	10459762	chr21:10459762:M	TTTTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:42,86,88:218:255,255,255,255,0,255	1/2:22,103,64:191:255,255,255,255,0,255	1/2:54,70,99:228:255,255,255,255,0,255
-chr21	10461781	chr21:10461781:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:48,65:160:255,0,255	0/1:17,91:163:255,0,40	0/1:56,34:131:255,0,255
-chr21	10468480	chr21:10468480:M	TGTGTGTGTGTGTGTATGTGTGTGTGTCTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,40:67:255,0,201	1/1:3,44:59:255,62,0	0/1:45,12:71:91,0,255
-chr21	10469402	chr21:10469402:M	AACAGCAACAACAACAGCAACAACAGCAACAACAACAACAA	<15.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:33,11:51:98,0,255	0/1:35,6:46:2,0,255	0/1:41,32:80:255,0,255
-chr21	10470052	chr21:10470052:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:18:138,0,189	1/1:0,10:15:255,11,0	0/1:20,10:33:195,0,255
-chr21	10470069	chr21:10470069:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<15>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,7,30,8:59:221,166,255,68,62,30,239,221,0,255	2/2:0,0,43,7:67:194,255,255,38,154,0,244,255,1,255	1/3:0,15,5,15:49:255,144,255,255,208,255,255,0,140,255
-chr21	10471357	chr21:10471357:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:112,11,0	1/1:0,0:1:23,3,0	1/1:0,3:5:124,15,0
-chr21	10472288	chr21:10472288:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:45,98,32:177:255,0,253,255,92,255	1/2:14,100,55:169:255,238,110,255,0,255	0/1:62,81,28:176:255,0,255,255,229,255
-chr21	10474923	chr21:10474923:M	TTTTGTTTTGTTTTG	<2.8>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:53,80:133:255,0,255	0/1:41,130:171:255,0,255	0/1:52,76:134:255,0,255
-chr21	10476863	chr21:10476863:M	TTTTGTTTTTTGTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,17:65:56,0,255	0/1:36,11:47:18,0,255	0/0:67,12:80:0,59,255
-chr21	10477785	chr21:10477785:M	TATTTCTTTATTTTATTTTTATTTATTT	<6>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:34,79:122:255,0,30	1/1:27,82:109:255,54,0	0/1:32,67:125:194,0,128
-chr21	10486318	chr21:10486318:M	ATATATATATATATATATATATATA	<7.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,32:49:255,255,255,255,0,255	2/2:0,0,34:38:255,255,255,105,101,0	1/2:0,27,32:60:255,255,255,255,0,255
-chr21	10486645	chr21:10486645:M	TTTTTTTTCTTCTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:38:9,0,240	0/0:23,2:32:0,44,255	0/1:23,15:45:83,0,197
-chr21	10487145	chr21:10487145:M	TTTCTTTTTTTTTTCTTTCTTTCTTT	<5.5>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:24,28:69:255,0,255	0/1:24,26:65:255,0,240	0/1:35,28:72:255,0,255
-chr21	10489767	chr21:10489767:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:24,0,28	0/1:5,4:10:33,0,34	0/1:7,4:12:19,0,57
-chr21	10495296	chr21:10495296:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:16:37,0,140	0/0:11,0:11:0,32,178	0/0:24,1:25:0,56,255
-chr21	10497571	chr21:10497571:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:10:37,0,34	1/1:1,9:10:105,15,0	0/0:27,4:36:0,36,255
-chr21	10501513	chr21:10501513:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:25:255,65,0	1/1:0,18:25:255,53,0	1/1:0,24:26:255,77,0
-chr21	10501938	chr21:10501938:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,34:36:255,70,0	1/1:0,34:34:255,100,0	1/1:1,38:40:255,99,0
-chr21	10510877	chr21:10510877:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,31:57:255,255,167,241,0,83	2/2:0,4,29:34:255,255,242,100,49,0	1/2:0,21,25:63:255,255,126,209,0,94
-chr21	10511667	chr21:10511667:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,8,4:14:255,255,255,64,64,24,87,84,0,45	3/3:0,0,0,1:4:80,78,77,45,45,36,11,11,10,0	1/2:0,6,7,3:18:255,192,151,134,0,85,211,28,89,171
-chr21	10512046	chr21:10512046:M	TTTTCTTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:9:49,0,0	1/1:0,6:8:89,22,0	0/1:1,2:5:21,0,9
-chr21	10512370	chr21:10512370:M	TTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,120,0	1/1:0,29:29:255,87,0	1/1:3,47:54:255,70,0
-chr21	10516135	chr21:10516135:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,18:33:255,253,158,189,0,94	2/2:0,1,21:24:255,255,255,72,54,0	1/2:0,13,22:39:255,255,180,212,0,108
-chr21	10516457	chr21:10516457:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,53:53:255,157,0	1/1:0,35:35:255,103,0	1/1:0,88:88:255,255,0
-chr21	10516879	chr21:10516879:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT	<10.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:7,6:17:20,0,55	0/1:5,8:13:47,0,17	0/0:24,1:28:0,61,255
-chr21	10516923	chr21:10516923:M	TATCTATCTGTCTATCTGTCTATCTATCTATCTATCT	<11.2>,<12.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,22:35:255,209,110,117,0,22	2/2:0,0,15:17:255,174,131,45,37,0	1/2:0,10,12:28:255,146,75,92,0,24
-chr21	10518572	chr21:10518572:M	CAAACAAACAAACAAACAAACAAACAAA	<6>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,60:60:255,178,0	1/1:0,34:34:255,100,0	1/1:0,69:69:255,204,0
-chr21	10519316	chr21:10519316:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,38:40:255,99,0	1/1:2,22:24:255,35,0	1/1:2,47:51:255,104,0
-chr21	10527134	chr21:10527134:M	CTCTCTCTCTCTCTCTCTCTCTCTC	<14.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:22,16:40:255,0,255	0/0:32,0:32:0,95,255	0/1:46,10:59:50,0,255
-chr21	10528201	chr21:10528201:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,38,16:54:255,255,116,255,0,255	2/2:0,2,33:37:255,255,255,105,75,0	1/2:5,63,19:88:255,241,74,255,0,255
-chr21	10529184	chr21:10529184:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,4:22:7,0,221	0/0:10,0:13:0,34,184	0/1:17,6:24:31,0,224
-chr21	10540010	chr21:10540010:M	AAAAACCAAAAACAACAACAACAAACAAAAACAAAAAACCAAAACAAAA	<7.5>	.	.	Motif=AAAAAC	GT:AD:DP:PL	0/1:29,11:40:166,0,255	0/0:27,0:27:0,81,255	0/1:33,19:52:255,0,255
-chr21	10541479	chr21:10541479:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:37,20:59:255,0,255	0/0:29,0:31:0,90,255	0/1:60,17:79:228,0,255
-chr21	10559916	chr21:10559916:M	ATATATATCTATATATACATATATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:34,8:42:54,0,255	0/0:27,0:27:0,81,255	0/1:54,22:76:255,0,255
-chr21	10567108	chr21:10567108:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0,0:29:0,81,255,83,255,255	0/2:8,0,6:14:49,90,255,0,119,79	0/1:14,14,1:34:255,0,255,255,195,255
-chr21	10572005	chr21:10572005:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,12:35:43,0,144	0/1:12,9:22:47,0,70	0/1:32,13:48:38,0,217
-chr21	10575827	chr21:10575827:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:57,1:58:0,148,255	0/0:39,0:39:0,107,255	0/1:66,24:93:48,0,255
-chr21	10576826	chr21:10576826:M	TATACATATATACATATATATATATATATATATATATATATATATATATATA	<18>,<27>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,12,5:26:255,0,194,255,13,255	0/0:0,0,0:2:0,6,58,5,23,17	1/2:0,8,4:13:214,23,79,196,0,192
-chr21	10584880	chr21:10584880:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,11:26:169,93,126,130,0,197	0/1:12,8,0:21:30,0,59,83,85,220	1/2:16,21,15:53:89,15,166,80,0,255
-chr21	10585242	chr21:10585242:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<28>,<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,14,1:28:216,0,159,135,106,187	0/2:6,0,11:17:67,85,185,0,60,16	0/1:32,8,3:43:41,0,255,45,255,255
-chr21	10588198	chr21:10588198:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,17:49:37,0,179	0/0:28,1:31:0,69,255	0/1:34,35:73:173,0,145
-chr21	10592806	chr21:10592806:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>	.	.	Motif=GT	GT:AD:DP:PL	0/0:44,0:45:0,133,255	0/0:31,0:33:0,98,255	0/1:42,16:64:140,0,255
-chr21	10597401	chr21:10597401:M	TTTTCTTTTTTCTTTTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:2,0,93	0/0:5,1:6:0,3,59	0/1:12,11:28:136,0,101
-chr21	10599800	chr21:10599800:M	TTAGTTAGTTAGTTAGTTAGTTAGTTAGTT	<6.5>	.	.	Motif=TTAG	GT:AD:DP:PL	0/0:49,0:63:0,21,255	0/1:20,16:36:100,0,150	0/0:60,1:72:0,67,255
-chr21	10611944	chr21:10611944:M	AAAAAAAAAAA	<12>,<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,18,0,26:45:255,255,255,255,200,242,142,0,126,164	3/3:0,0,0,45:45:255,255,255,255,255,255,135,131,108,0	2/3:0,15,26,22:64:255,255,255,178,66,36,227,48,0,182
-chr21	10615293	chr21:10615293:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,4,22:41:255,189,242,0,114,196	2/2:0,2,24:30:255,255,255,83,58,0	0/1:21,23,11:57:202,0,92,78,124,255
-chr21	10617403	chr21:10617403:M	GAAGGAAGGAAAAAGGAGGAAAGGAAGGGAGGGAGGAAGGAAG	<1.8>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,5:5:255,15,0	1/1:0,1:1:52,3,0	1/1:0,2:2:106,6,0
-chr21	10617559	chr21:10617559:M	GAAAGAAAGAAGGAAAGAAGGAAGGAAGGAGAAAAGAAAGAAAAGAAAGGAAAAGAAAAAAAAGAAAGA	<16.5>,<17.5>	.	.	Motif=GAAA	GT:AD:DP:PL	2/2:0,0,9:15:47,64,107,16,19,0	2/2:0,0,8:8:45,62,100,16,22,0	1/2:0,10,16:31:184,86,139,100,0,52
-chr21	10617758	chr21:10617758:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,30:51:177,0,83	1/1:1,39:40:255,94,0	0/1:21,40:61:252,0,56
-chr21	10620402	chr21:10620402:M	AAAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,15,8:23:255,86,18,153,0,85	1/1:0,20,0:20:255,60,0,248,51,189	1/2:0,16,8:24:255,86,15,162,0,91
-chr21	10637210	chr21:10637210:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,20:20:255,59,0
-chr21	10641224	chr21:10641224:M	ACACACACACACACACACACACGCACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,35:35:255,92,0	1/1:0,21:23:235,60,0	1/1:0,51:68:255,178,0
-chr21	10650893	chr21:10650893:M	ACACACACACACACACACACACACACACACACACACA	<25.5>,<26.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,5,5,0:12:253,45,12,51,0,20,195,41,50,173	2/2:0,0,3,0:3:85,31,22,9,7,0,53,29,9,44	1/3:0,3,1,8:18:255,197,162,135,104,91,73,0,7,33
-chr21	10732811	chr21:10732811:M	CCTTCCCCTTCC	<1.8>	.	.	Motif=CCTTCC	GT:AD:DP:PL	1/1:2,47:49:255,93,0	1/1:2,36:38:231,69,0	1/1:0,73:73:255,160,0
-chr21	10738615	chr21:10738615:M	CATTCCATTTGATTCCATTCGATTC	<27>	.	.	Motif=CATTC	GT:AD:DP:PL	0/1:42,25:67:109,0,255	0/1:34,16:50:48,0,255	0/1:72,27:99:40,0,255
-chr21	10738670	chr21:10738670:M	CATTCGATTCCATTCC	<27>	.	.	Motif=CATTC	GT:AD:DP:PL	0/1:54,25:79:73,0,255	0/1:39,16:55:33,0,255	0/1:81,27:108:13,0,255
-chr21	10738725	chr21:10738725:M	ATTCCATTCCA	<27>	.	.	Motif=ATTCC	GT:AD:DP:PL	0/1:62,25:87:56,0,255	0/1:30,16:46:64,0,255	0/1:82,27:109:17,0,255
-chr21	10774031	chr21:10774031:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,56:56:255,165,0	1/1:0,42:42:255,124,0
-chr21	10775774	chr21:10775774:M	AATAAAGTAAATAAATAAAATAAATAAATAAAT	<9>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:1,30:31:255,68,0	1/1:1,19:20:255,35,0	1/1:1,45:46:255,113,0
-chr21	12997128	chr21:12997128:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:62,2:64:0,154,255	0/0:70,2:75:0,185,255	0/1:46,21:69:129,0,255
-chr21	12999938	chr21:12999938:M	AAAAAATAAAAAAAAAAAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,24:43:182,0,88	0/1:24,8:35:9,0,206	0/1:14,23:40:181,0,60
-chr21	13000071	chr21:13000071:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.5>,<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/2:7,17,13:37:255,9,93,58,0,105	0/1:8,31,0:40:255,0,97,255,157,255	0/1:14,28,10:53:255,0,224,219,169,255
-chr21	13001123	chr21:13001123:M	AAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGA	<17.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,7:10:40,0,3	1/1:0,6:7:55,15,0	0/0:12,0:15:0,37,134
-chr21	13005366	chr21:13005366:M	GTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:28,13:42:117,0,255	0/1:27,23:53:255,0,255	0/0:42,8:51:0,5,255
-chr21	13007695	chr21:13007695:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,0:14:0,0,96	0/0:14,1:19:0,19,155	0/1:13,7:26:77,0,112
-chr21	13011665	chr21:13011665:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,5:25:22,0,191	0/1:16,9:26:55,0,165	0/0:28,2:31:0,59,255
-chr21	13012234	chr21:13012234:M	AAAAAACAAAAAAAAAAAACAAAAA	<26>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,23,10:39:255,254,190,255,0,255	1/2:11,13,18:44:255,255,255,21,0,255	0/1:10,17,0:39:112,0,45,124,57,255
-chr21	13014603	chr21:13014603:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,15,7:44:88,0,197,109,93,255	0/2:29,2,17:49:82,190,255,0,253,240	0/1:24,20,9:53:100,0,248,134,126,255
-chr21	13016283	chr21:13016283:M	AAAAAAAAAAGAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:24,5,12:41:132,82,255,0,255,255	0/1:27,18,1:47:255,0,255,255,255,255	0/2:32,0,8:41:8,107,255,0,255,255
-chr21	13016950	chr21:13016950:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,12:47:180,0,255	0/1:34,29:65:255,0,255	0/1:28,11:45:178,0,255
-chr21	13017296	chr21:13017296:M	TTTTTTTATTTTTTTGTTTTTTATTTTTTATTTATTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	0/2:18,8,10:36:255,27,255,0,255,255	0/1:26,15,0:41:255,0,255,196,255,255	0/2:23,5,5:33:122,0,255,0,255,255
-chr21	13017975	chr21:13017975:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,13:40:255,0,255	0/1:24,14:39:255,0,255	0/1:20,17:39:255,0,255
-chr21	13020152	chr21:13020152:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:45,11:56:26,0,255	0/0:46,2:53:0,117,255	0/1:36,14:56:92,0,255
-chr21	13020463	chr21:13020463:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,8:14:67,0,26	0/1:5,2:8:3,0,51	0/1:6,5:13:33,0,46
-chr21	13021130	chr21:13021130:M	AAAAAACAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:47,37:84:255,0,255	0/1:36,42:79:255,0,255	0/1:46,33:80:255,0,255
-chr21	13021854	chr21:13021854:M	AAACAAAAAAACAAACAAAAACAAACAAACAAACAAA	<6.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:32,35:71:255,0,255	0/1:27,22:55:255,0,255	0/1:33,22:57:255,0,255
-chr21	13026281	chr21:13026281:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:33,15,18:67:255,84,255,0,255,255	0/2:38,0,38:76:255,255,255,0,255,255	0/1:35,45,0:80:255,0,255,255,255,255
-chr21	13028775	chr21:13028775:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,0:3:20,0,20	0/1:3,5:13:147,0,42	0/1:2,3:8:60,0,50
-chr21	13032595	chr21:13032595:M	AAAATAAAATAAAATAAAATAAAATTAAAATAAAATAAAATAAAATAAAATAAAAATAAA	<7.8>,<8.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:18,4,3:25:74,0,255,14,255,255	0/2:5,0,6:11:134,82,188,0,121,104	0/1:12,10,0:22:211,0,255,139,255,255
-chr21	13034143	chr21:13034143:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:34,38:78:255,0,255	0/1:37,34:73:255,0,255	0/1:32,35:72:255,0,255
-chr21	13034350	chr21:13034350:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0,0:1:0,3,27,3,27,27	2/2:0,0,3:5:85,83,88,4,12,0	0/1:1,4,0:7:118,0,6,108,24,125
-chr21	13034668	chr21:13034668:M	AAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:38,10:60:158,0,255	0/1:31,21:56:255,0,255	0/1:33,1:54:17,0,255
-chr21	13034845	chr21:13034845:M	TTTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,5,4:11:157,28,51,48,0,71	0/1:2,10,0:13:242,0,16,199,48,225	0/2:8,0,3:12:47,57,253,0,203,194
-chr21	13039472	chr21:13039472:M	AATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:25,8:40:0,20,86	0/1:11,7:18:2,0,23	0/0:19,0:28:0,38,103
-chr21	13039507	chr21:13039507:M	AAAAAGAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:43:255,0,109	0/1:15,12:32:136,0,146	0/0:43,4:49:0,59,255
-chr21	13043998	chr21:13043998:M	TTTTCTTTTTTTCTTTCTCTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:18:189,0,69	0/1:4,8:15:168,0,66	0/1:11,0:22:21,0,241
-chr21	13092357	chr21:13092357:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,6,10:27:183,65,135,0,76,201	0/1:15,10,3:28:86,0,116,67,155,255	0/1:10,21,0:33:184,0,62,220,152,255
-chr21	13093615	chr21:13093615:M	AAAAAAAAAAAAAGAAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:36:255,88,0	1/1:2,30:33:255,65,0	1/1:1,41:42:255,106,0
-chr21	13102290	chr21:13102290:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:41,7:48:0,45,255	0/1:27,10:37:21,0,230	0/0:30,6:36:0,25,255
-chr21	13137904	chr21:13137904:M	ATAATAATAAAATAAAATAAAATAAAA	<4.4>	.	.	Motif=ATAAA	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:28,0:28:0,82,255	0/1:40,15:55:120,0,255
-chr21	13172591	chr21:13172591:M	TTTTTTCTTTTTCTTTCTTTCTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,8:25:147,0,255	0/0:17,0:17:0,51,255	0/1:20,9:31:166,0,255
-chr21	13192562	chr21:13192562:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,55,0	1/1:1,12:13:183,21,0	1/1:0,17:18:255,42,0
-chr21	13196897	chr21:13196897:M	AAAAAAAAAAAAAAAGAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,11:14:121,0,4	0/1:16,6:23:19,0,173	0/1:12,13:25:116,0,102
-chr21	13211837	chr21:13211837:M	TATATATATATATATATTATATATATATATATATATATA	<18.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,14:17:255,32,0	0/1:0,1:2:12,0,6	0/1:3,4:7:51,0,33
-chr21	13224899	chr21:13224899:M	AAAACAAAACAAAACAAGACAAAACAAAACAAGACAAAACAAAACAAAA	<10>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,18:18:255,53,0	1/1:0,20:20:255,59,0
-chr21	13234311	chr21:13234311:M	AAAAAAGAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,17:37:215,0,255	1/1:0,49:50:255,147,0	0/1:30,11:41:84,0,255
-chr21	13246762	chr21:13246762:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,13:23:255,0,182	1/1:0,32:33:255,99,0	0/1:13,16:29:255,0,255
-chr21	13251063	chr21:13251063:M	ATATATATATATA	<8.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,6,4:19:65,0,119,70,124,255	2/2:0,0,4:4:49,49,49,11,11,0	0/0:17,3,1:24:0,7,255,56,255,255
-chr21	13251105	chr21:13251105:M	ATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:14,4:21:0,13,255	0/1:0,4:6:31,0,8	0/0:18,1:23:0,55,255
-chr21	13255290	chr21:13255290:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:21:133,0,115	1/1:0,9:14:169,29,0	0/1:15,8:23:76,0,202
-chr21	13259015	chr21:13259015:M	CTCTTTCTCTTT	<1.7>	.	.	Motif=CTCTTT	GT:AD:DP:PL	0/1:15,16:31:255,0,255	1/1:0,27:27:255,81,0	0/1:13,20:33:255,0,255
-chr21	13261623	chr21:13261623:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,16:38:255,0,255	1/1:0,29:29:255,87,0	0/1:16,18:35:255,0,255
-chr21	13264531	chr21:13264531:M	CACACACACACACACACACACACACACATGCACACACACACA	<23>,<25>,<26>	.	.	Motif=CA	GT:AD:DP:PL	0/1:12,9,0,0:22:201,0,255,237,255,255,240,255,255,255	1/2:0,8,8,0:19:255,208,177,212,0,204,255,138,235,255	0/3:18,1,0,10:30:211,240,255,174,255,255,0,255,255,255
-chr21	13265399	chr21:13265399:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:134,0,96	1/1:3,18:22:250,2,0	0/1:21,12:35:132,0,255
-chr21	13267824	chr21:13267824:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:14,16:30:255,0,255	1/1:0,20:22:255,60,0	0/1:9,14:23:255,0,181
-chr21	13268681	chr21:13268681:M	ACACACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,8:25:77,0,187	1/1:1,32:36:255,58,0	0/1:15,15:32:179,0,197
-chr21	13272272	chr21:13272272:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,19,11:54:255,0,255,105,161,229	0/2:13,11,24:49:251,77,255,0,12,13	0/2:25,8,11:45:83,14,255,0,197,167
-chr21	13278047	chr21:13278047:M	GAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAG	<16.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:15,14:30:187,0,196	1/1:0,14:14:251,41,0	0/1:13,13:27:169,0,160
-chr21	13279121	chr21:13279121:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,13:28:172,0,181	1/1:0,38:38:255,112,0	0/1:26,22:48:255,0,255
-chr21	13290891	chr21:13290891:M	CACACACACACACACAC	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,22:40:255,0,210	1/1:0,33:34:255,100,0	0/1:19,24:45:255,0,225
-chr21	13301756	chr21:13301756:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,10:22:107,0,141	0/1:16,8:26:69,0,188	0/1:16,9:26:78,0,196
-chr21	13316249	chr21:13316249:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,21:47:254,0,255	0/1:20,17:38:189,0,250	0/1:22,20:42:240,0,255
-chr21	13330524	chr21:13330524:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<7.8>,<10.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,18,8:26:255,143,159,255,0,255	1/2:0,8,4:12:255,68,83,203,0,196	0/1:6,10,0:16:232,0,125,253,104,255
-chr21	13335024	chr21:13335024:M	TTTCTTTCTTTCTTTCTTTCTTTTTTTCT	<8.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:21,14:35:166,0,255	0/1:21,13:34:135,0,255	0/1:10,9:19:112,0,132
-chr21	13343201	chr21:13343201:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:23,0,23	1/1:1,6:8:92,7,0	0/1:6,6:12:66,0,67
-chr21	13346590	chr21:13346590:M	TTTTTTTTATTTATTATTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,8:15:174,0,145	0/1:10,12:22:255,0,204	0/1:5,16:21:255,0,72
-chr21	13355921	chr21:13355921:M	ATATACATATATATATATATATATATATATA	<12.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:7,1,11:22:211,113,255,0,147,109	0/1:2,12,0:17:255,0,3,164,36,158	1/2:0,9,7:17:255,81,33,117,0,67
-chr21	13355951	chr21:13355951:M	AGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGA	<31.5>,<67.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,4,4:10:85,37,22,61,0,117	2/2:0,0,4:4:51,51,51,11,11,0	0/0:0,0,0:3:0,5,19,6,24,32
-chr21	13358752	chr21:13358752:M	GAAAAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAA	<6.6>,<6.8>	.	.	Motif=GAAAA	GT:AD:DP:PL	0/1:5,10,0:20:153,0,37,64,38,72	0/2:3,0,7:11:48,35,74,0,36,15	0/1:4,9,0:17:114,0,51,50,49,73
-chr21	13359519	chr21:13359519:M	CCCTGACCCTGACCCGTGACCCTGACCCTTAACCCCTGACCCTGACCCCTATCCCCTGACCCTGACCC	<4.7>,<8>	.	.	Motif=CCCTGA	GT:AD:DP:PL	0/2:7,0,4:11:64,85,246,0,161,149	0/0:6,0,0:6:0,18,156,18,156,156	0/1:7,3,1:11:41,0,152,40,138,198
-chr21	13363222	chr21:13363222:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:25:139,0,158	0/1:13,18:35:226,0,148	0/1:10,9:20:103,0,130
-chr21	13381720	chr21:13381720:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,14,0:25:255,0,218,255,255,255	1/1:1,21,0:22:255,38,0,255,63,255	1/2:0,13,11:25:255,255,255,255,0,255
-chr21	13384063	chr21:13384063:M	TATACATATATATATACACACATATATATGTGTGTATATATATATACACACACATATATATATATAT	<34.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,6:16:16,0,32	0/1:4,2:7:7,0,16	1/1:1,4:7:40,8,0
-chr21	13384129	chr21:13384129:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,7,0:26:38,0,76,86,142,255	0/1:19,5,0:28:3,0,116,77,197,255	1/2:0,7,13:31:255,255,255,100,0,154
-chr21	13389552	chr21:13389552:M	TATATATATATATATATATATATATATATACATATA	<8>,<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,10,2:23:208,0,244,217,91,255	0/1:1,4,0:6:94,0,13,96,11,105	1/2:0,12,11:24:255,124,237,255,0,255
-chr21	13389637	chr21:13389637:M	AACAAAACAAAGCAAA	<2.2>	.	.	Motif=AACAA	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:27,0:27:0,79,255	0/1:11,28:39:255,0,90
-chr21	13392823	chr21:13392823:M	TGTTTGTTTGTTTGTTTGTTT	<4.2>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:26,0:26:0,77,255	0/1:12,10:22:124,0,161
-chr21	13393041	chr21:13393041:M	CACACCACATACACATACACACACACACACACACACACACACACACACA	<21.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:4,0,10:14:137,177,255,0,71,30	0/2:9,0,14:24:167,236,255,0,169,99	1/2:0,7,8:15:255,137,187,218,0,182
-chr21	13405436	chr21:13405436:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:40:0,118,255	0/0:44,0:45:0,132,255	0/1:20,17:37:206,0,255
-chr21	13409899	chr21:13409899:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<19>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,2,0:13:2,0,59,10,46,83	0/2:3,0,3:7:25,41,99,0,31,20	1/2:0,11,1:21:162,36,15,164,0,255
-chr21	13409934	chr21:13409934:M	GAGAGAGAGAGAGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<22>,<28>	.	.	Motif=GA	GT:AD:DP:PL	0/2:8,0,7:18:171,197,255,0,178,174	0/2:1,0,2:5:58,61,81,0,22,16	1/2:0,4,3:12:197,88,71,116,0,115
-chr21	13425654	chr21:13425654:M	CACACACACACACACACACACACACACACACACACACACAC	<14.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,16,0:27:255,0,188,255,242,255	0/1:15,19,0:39:255,0,255,255,255,255	1/2:0,18,15:36:255,255,255,255,0,255
-chr21	13431318	chr21:13431318:M	AAAAGAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:18:87,0,96	0/1:12,7:19:58,0,140	1/1:1,19:21:255,44,0
-chr21	13431490	chr21:13431490:M	AGAAAAAAAAAGAAAAGAAA	<4.2>	.	.	Motif=AGAAA	GT:AD:DP:PL	0/0:34,9:43:0,30,197	0/0:31,5:36:0,45,205	0/1:22,14:36:25,0,88
-chr21	13432655	chr21:13432655:M	AGAGAGAGAGAGAGAGAGAGAGAGAGA	<9.5>,<12.5>	.	.	Motif=AG	GT:AD:DP:PL	0/2:17,0,11:31:86,173,255,0,255,181	0/2:10,0,13:28:125,193,255,0,144,75	1/2:1,14,22:48:255,197,255,215,0,255
-chr21	13434213	chr21:13434213:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,2,9:28:66,73,255,0,191,144	0/2:12,0,10:27:56,107,255,0,208,140	1/2:3,26,16:46:255,124,124,255,0,219
-chr21	13435224	chr21:13435224:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,15,1:45:226,0,255,168,255,255	0/1:38,13,3:56:147,0,255,118,255,255	0/2:26,13,24:64:255,80,255,0,170,158
-chr21	13438466	chr21:13438466:M	AAAAAAAAAAAAAAAA	<13>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,6:20:38,95,255,0,176,121	0/2:10,0,5:18:40,90,255,0,145,96	0/1:14,8,6:29:147,0,255,125,118,255
-chr21	13440249	chr21:13440249:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,1:39:0,96,255	0/0:34,1:35:0,85,255	0/1:12,12:24:148,0,149
-chr21	13444327	chr21:13444327:M	AACAACAACAACAACAACAA	<6.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:8,7:18:28,0,28	0/1:20,17:41:70,0,73	0/1:17,11:29:27,0,75
-chr21	13448839	chr21:13448839:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,3:18:12,0,195	0/0:21,3:25:0,21,255	0/1:10,9:22:134,0,114
-chr21	13449197	chr21:13449197:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,5:10:54,69,195,0,83,55	0/2:3,1,7:11:90,77,148,0,32,17	0/1:4,3,1:8:59,0,87,34,50,77
-chr21	13449686	chr21:13449686:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,2:8:13,0,70,0,25,70	0/2:7,0,4:12:37,68,201,0,99,87	0/1:2,6,0:8:82,0,12,104,30,182
-chr21	13458146	chr21:13458146:M	ATAATAATAATAATAATAATAATAATGATAA	<11.3>	.	.	Motif=ATA	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/1:12,10:22:115,0,151	0/0:26,0:26:0,77,255
-chr21	13461891	chr21:13461891:M	AAAAAAAAAAAAGAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,1:33:0,80,255	0/0:36,2:40:0,82,255	0/1:18,8:31:41,0,198
-chr21	13467543	chr21:13467543:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:39:0,117,255	0/1:32,12:46:191,0,255	0/0:45,0:47:0,138,255
-chr21	13468039	chr21:13468039:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/0:31,2:34:0,65,255	0/1:17,14:33:152,0,217
-chr21	13468346	chr21:13468346:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,51,255	0/1:5,4:10:77,0,104	0/0:11,0:11:0,33,255
-chr21	13472158	chr21:13472158:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/0:30,0:30:0,90,255	0/1:20,24:45:255,0,255
-chr21	13474558	chr21:13474558:M	AAAAAAAAAAAAAAA	<16>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/3:11,0,1,5:17:109,132,255,72,255,255,0,197,255,255	1/2:1,9,9,1:20:255,146,109,114,0,111,255,114,148,255	0/0:22,1,1,0:28:0,50,255,49,255,255,70,255,255,255
-chr21	13476731	chr21:13476731:M	TTTTTTCTTTTTCTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:27:0,73,255	0/1:12,15:28:180,0,138	0/0:32,1:33:0,79,255
-chr21	13478586	chr21:13478586:M	CACACACACACACACACACACACACACACACA	<17>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,13:32:88,0,135	1/1:2,31:35:255,61,0	0/0:22,1:28:0,62,255
-chr21	13481274	chr21:13481274:M	TGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:15,0,5,0:21:98,133,255,0,255,255,141,255,255,255	2/3:0,0,5,4:12:255,255,246,109,104,84,158,135,0,141	0/1:18,10,0,0:31:211,0,255,255,255,255,255,255,255,255
-chr21	13482544	chr21:13482544:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,0,15:30:186,231,255,0,255,178	1/2:0,23,14:41:255,204,124,255,0,255	0/0:32,0,4:36:0,96,255,35,255,255
-chr21	13485069	chr21:13485069:M	AAGAAGAAGAAGAAGAAG	<8>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:11,10:22:130,0,149	0/1:15,10:28:109,0,232	0/1:29,14:48:143,0,255
-chr21	13487504	chr21:13487504:M	AAAAGAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,1:47:0,118,255	0/1:28,15:44:120,0,255	0/0:42,1:46:0,114,255
-chr21	13489516	chr21:13489516:M	ACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,20:33:212,0,104	0/1:11,18:29:184,0,80	0/1:17,18:36:169,0,162
-chr21	13490554	chr21:13490554:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<8.5>,<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,2,12,2:20:255,209,184,33,13,0,241,146,17,216	1/2:0,6,7,0:13:255,113,75,97,0,59,255,93,96,244	2/3:0,0,4,3:7:175,134,122,48,47,28,65,54,0,45
-chr21	13490611	chr21:13490611:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:21:123,24,0	0/1:3,6:10:34,0,13	1/1:0,0:6:34,10,0
-chr21	13492464	chr21:13492464:M	ACACACACACACACACACACACACACACACACAGAGAGACACACACA	<24.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,11,1:22:116,0,55,112,52,255	2/2:0,0,6:8:203,203,203,24,24,0	0/1:22,9,0:34:38,0,255,138,255,255
-chr21	13499795	chr21:13499795:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/1:15,16:31:194,0,175	0/1:19,15:36:190,0,243
-chr21	13501779	chr21:13501779:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:15,8:25:64,0,202	0/0:22,1:25:0,55,255
-chr21	13502393	chr21:13502393:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:1,16,77,0,53,50	1/2:1,2,3:6:47,33,66,17,0,40	0/1:3,3,0:7:38,0,27,56,39,123
-chr21	13506423	chr21:13506423:M	TATACATATACATACTTACATATGTATAATACATATACATA	<2.3>	.	.	Motif=TATACA	GT:AD:DP:PL	0/1:19,11:30:193,0,255	0/1:12,5:17:74,0,250	0/1:28,4:32:3,0,255
-chr21	13507637	chr21:13507637:M	CTTTCTTTCTTTC	<2.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:17,16:33:212,0,232	0/1:20,20:40:246,0,245	0/0:40,0:40:0,118,255
-chr21	13510435	chr21:13510435:M	TATATATATATATATATATATATATAT	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,22:30:185,5,0	1/1:1,9:12:112,21,0	1/1:4,20:26:166,3,0
-chr21	13518477	chr21:13518477:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:8:0,21,182	1/1:0,8:10:231,24,0	0/1:3,5:10:136,0,57
-chr21	13524301	chr21:13524301:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:6,0,72	1/1:0,15:18:198,39,0	0/1:7,6:17:55,0,54
-chr21	13535924	chr21:13535924:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,4:45:0,58,255	0/1:15,18:35:223,0,170	0/0:34,1:36:0,87,255
-chr21	13555888	chr21:13555888:M	TATATATATATATATATATATATATATATA	<12>,<19>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,0,3:10:64,85,255,0,195,186	1/1:0,3,0:3:94,9,0,94,9,94	0/0:5,0,0:7:0,17,158,15,156,155
-chr21	13566921	chr21:13566921:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:24,0,26:51:255,255,255,0,255,255	1/2:1,24,21:47:255,255,255,255,0,255	0/0:40,0,1:41:0,121,255,102,255,255
-chr21	13585167	chr21:13585167:M	AAAAAAAAAAAAAAAAGAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:21:145,0,255	0/1:8,5:14:98,0,185	0/0:13,0:17:0,47,255
-chr21	13595695	chr21:13595695:M	TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTATTTT	<9.8>,<10.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	2/2:0,0,8:9:155,155,155,24,23,0	1/1:0,3,0:5:92,10,0,65,10,57	2/2:0,0,6:6:113,113,113,18,18,0
-chr21	13597040	chr21:13597040:M	CACACAGACACACACACACACACACACACACACACACACACACACA	<26>	.	.	Motif=CA	GT:AD:DP:PL	0/0:6,0:6:0,18,180	1/1:0,6:8:189,21,0	0/0:4,0:6:0,18,148
-chr21	13597248	chr21:13597248:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:8:0,0,68	1/1:0,0:1:2,1,0	0/1:7,3:10:21,0,88
-chr21	13602769	chr21:13602769:M	AAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAA	<34>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:7:90,29,75,56,0,60	2/2:0,0,1:1:14,17,26,3,3,0	1/2:1,1,3:5:41,29,78,8,0,12
-chr21	13603076	chr21:13603076:M	ACACACCACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,4:13:81,0,221	0/1:0,5:7:127,0,19	0/1:20,7:30:140,0,255
-chr21	13615824	chr21:13615824:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:22:84,0,185	0/0:22,1:24:0,53,255	0/1:6,13:21:185,0,57
-chr21	13616139	chr21:13616139:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:12,0,10:26:248,255,255,0,255,255	2/2:0,0,17:20:255,255,255,56,58,0	0/1:13,12,0:27:255,0,255,255,255,255
-chr21	13619420	chr21:13619420:M	AAAAAATAAAAATAAAAAACAAAACAAAAACAAAACAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	.	1/1:0,8:8:221,24,0
-chr21	13627446	chr21:13627446:M	AAAAAAACAAAAAAAAAAAAGAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:12,0,178	1/1:0,9:9:159,26,0	0/0:17,2:19:0,20,255
-chr21	13678394	chr21:13678394:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:205,35,0	.	0/1:1,4:5:55,0,2
-chr21	13711753	chr21:13711753:M	ATGCTTATGCTTAT	<1.7>	.	.	Motif=ATGCTT	GT:AD:DP:PL	0/0:11,1:12:0,8,255	0/1:8,3:11:52,0,186	0/0:11,0:11:0,33,255
-chr21	13782884	chr21:13782884:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.2>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:10,12:22:161,0,124	0/0:15,0:16:0,44,255	0/1:10,15:25:202,0,110
-chr21	13795297	chr21:13795297:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:91,9,0	0/0:1,0:2:0,3,28	0/1:1,1:3:20,0,23
-chr21	13809190	chr21:13809190:M	ATTATTATTATTATTATT	<6.3>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,16:37:9,0,27	0/0:38,3:45:0,60,166	1/1:0,26:33:88,28,0
-chr21	13809206	chr21:13809206:M	TTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,12:33:255,251,255,242,0,255	0/1:13,16,0:32:255,0,255,255,255,255	1/2:0,4,22:29:255,255,255,97,0,32
-chr21	13809599	chr21:13809599:M	TTTTTTTTTTGTCCTTTTTTTTTTTTTTTTTTT	<12>,<31>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,7:10:175,150,171,33,0,12	0/2:2,2,2:8:34,0,63,0,2,35	1/2:0,3,8:12:232,170,187,73,0,49
-chr21	13818174	chr21:13818174:M	TTTTTTTTTTTTCTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,20:37:255,255,255,255,0,255	1/2:1,17,20:39:255,255,255,255,0,255	2/2:1,0,38:39:255,255,255,97,117,0
-chr21	13827697	chr21:13827697:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,25:36:255,0,101	0/0:37,3:40:0,64,255	0/1:12,10:24:114,0,169
-chr21	13828862	chr21:13828862:M	TATATATATTATTAAATATATAT	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/0:31,3:34:0,23,255	0/1:14,5:19:72,0,255	0/0:30,2:32:0,43,255
-chr21	13829683	chr21:13829683:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:39:230,0,255	0/0:53,0:53:0,156,255	0/1:15,12:27:139,0,195
-chr21	13830168	chr21:13830168:M	ACACACACACACACCCATACTCACCCACCTACACACAGAAACACACCCACACACACAC	<10>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,7:23:118,0,255	0/1:22,5:27:53,0,255	0/1:18,6:24:86,0,255
-chr21	13836136	chr21:13836136:M	TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,11:22:252,0,187	0/0:9,0:10:0,30,255	0/1:9,5:15:109,0,201
-chr21	13873837	chr21:13873837:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,10:33:91,0,255	0/0:39,1:45:0,113,255	0/1:12,18:31:216,0,108
-chr21	13909190	chr21:13909190:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:14:0,8,158	0/1:8,4:14:23,0,107	0/0:20,3:24:0,12,255
-chr21	13912347	chr21:13912347:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:26,0,152	0/1:8,11:21:136,0,85	0/0:21,1:23:0,50,255
-chr21	13912519	chr21:13912519:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,12:25:182,0,87	0/1:6,8:17:109,0,62	0/1:7,3:10:23,0,92
-chr21	13914343	chr21:13914343:M	TTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,6:8:135,0,12	0/1:5,3:9:64,0,108	0/1:5,2:7:33,0,112
-chr21	13916535	chr21:13916535:M	AAAAAAAAAAAAAAAA	<15>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,17,5:27:255,109,68,255,0,255	1/2:0,8,8:20:255,197,179,147,0,213	1/2:0,16,5:24:255,129,88,255,0,255
-chr21	13925531	chr21:13925531:M	TTTTTTTTTTTGTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:18:128,0,74	0/1:11,10:22:107,0,133	0/1:11,9:20:101,0,135
-chr21	13934234	chr21:13934234:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,12:30:140,0,254	0/1:21,24:45:255,0,244	0/1:30,29:59:255,0,255
-chr21	13939365	chr21:13939365:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,20:48:255,0,255	0/1:14,19:35:255,0,255	0/1:23,22:46:255,0,255
-chr21	13940759	chr21:13940759:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,11:33:108,0,255	0/1:19,17:36:192,0,228	0/1:18,19:37:236,0,217
-chr21	13941491	chr21:13941491:M	TTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,10:20:255,250,211,191,0,150	1/2:0,13,3:26:255,78,26,255,0,255	1/2:0,12,14:29:255,255,255,255,0,251
-chr21	13943764	chr21:13943764:M	TTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,6:9:189,21,0	1/1:0,12:14:255,37,0
-chr21	13944986	chr21:13944986:M	AAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,16:37:255,0,255	0/1:13,12:26:255,0,255	0/1:8,21:34:255,0,130
-chr21	13963526	chr21:13963526:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,27:38:255,0,87	0/1:17,26:43:255,0,178	0/1:18,21:40:255,0,225
-chr21	13966218	chr21:13966218:M	TGTATGTGTATATGTGCATGTGTCTATGTGTATGTGTAT	<7.5>	.	.	Motif=TGTATG	GT:AD:DP:PL	0/1:19,18:37:231,0,252	0/1:15,4:19:15,0,212	0/1:20,11:31:111,0,255
-chr21	13973878	chr21:13973878:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<20>	.	.	Motif=TG	GT:AD:DP:PL	0/1:13,14,0:31:255,0,255,255,255,255	0/2:10,0,6:17:52,102,255,0,179,133	0/1:11,18,0:32:255,0,255,255,208,255
-chr21	13981522	chr21:13981522:M	CCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,1:1:28,3,0	.	1/1:0,3:4:100,12,0
-chr21	13998484	chr21:13998484:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,34:38:255,255,255,97,72,0	1/2:1,31,15:47:255,235,118,255,0,255	1/2:2,21,23:47:255,255,255,255,0,254
-chr21	13999108	chr21:13999108:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1:34:0,83,255	0/1:27,10:38:41,0,255	0/0:29,1:33:0,79,255
-chr21	14000638	chr21:14000638:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:29:255,77,0	1/1:0,20:26:255,65,0	1/1:0,17:20:255,56,0
-chr21	14003480	chr21:14003480:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:18:255,34,0	1/1:1,30:33:255,79,0	1/1:1,31:32:255,76,0
-chr21	14019889	chr21:14019889:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:245,0,255	1/1:0,37:37:255,109,0	0/0:38,1:41:0,102,255
-chr21	14025002	chr21:14025002:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:34:172,0,245	1/1:3,32:36:255,52,0	0/0:38,0:40:0,115,255
-chr21	14029013	chr21:14029013:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:24:150,0,107	1/1:5,32:38:255,28,0	0/0:22,4:30:0,3,255
-chr21	14031160	chr21:14031160:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:8,0,4:14:84,92,255,0,211,200	1/2:0,5,2:8:171,44,29,112,0,102	0/0:9,0,0:9:0,27,250,27,251,252
-chr21	14047139	chr21:14047139:M	GAGTGGAGTGGAGTGGAGTGGAGAGTGGAGTGGAGTGGAGCGGAGCGGAGCAGAGTGGAGTGGAGTGGA	<14.8>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:4,5:9:65,0,47	0/0:15,0:15:0,44,255	0/1:2,7:9:100,0,10
-chr21	14058640	chr21:14058640:M	GGCCAGGGCCAGGGCACAGGCAGGGGCAGGGCCTGGATAAGGGCAGGGTCAGGGATATGGCAGGACCAGGGTCCAGGCCAGGGCCAGGGTCCAGG	<3.3>	.	.	Motif=GGCCAG	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,29:29:255,87,0	1/1:0,32:32:255,96,0
-chr21	14060241	chr21:14060241:M	CCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	0/1:3,1:5:4,0,53	0/0:6,0:6:0,18,106	0/1:1,4:5:58,0,4
-chr21	14062713	chr21:14062713:M	GGGGGGGGGGG	<10>,<12>	.	.	Motif=G	GT:AD:DP:PL	1/2:0,1,1:2:30,17,23,17,0,23	1/1:0,6,0:6:102,18,0,118,18,172	0/2:2,0,4:7:52,69,132,0,29,17
-chr21	14065631	chr21:14065631:M	TATATATATATATATATATATATATATATATATATATATATATAT	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,3:5:155,15,0	1/1:0,1:3:27,3,0	1/1:0,2:2:55,6,0
-chr21	14079985	chr21:14079985:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:27:167,0,175	0/0:36,2:38:0,76,255	0/1:20,21:42:255,0,244
-chr21	14081510	chr21:14081510:M	TTATTATTATTATTA	<6>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:33,6:39:0,21,255	0/1:8,5:13:36,0,80	0/0:30,0:30:0,86,255
-chr21	14081523	chr21:14081523:M	TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA	<12.7>,<13.7>	.	.	Motif=TAG	GT:AD:DP:PL	0/0:31,0,0:34:0,102,255,102,255,255	0/2:7,1,14:26:255,172,255,0,198,184	0/1:24,14,0:38:231,0,255,185,255,255
-chr21	14085976	chr21:14085976:M	TTTTTTTTTTTTTTCTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:22:84,0,175	0/0:30,0:31:0,88,255	0/1:13,13:28:161,0,161
-chr21	14088389	chr21:14088389:M	AATATAATTAAAAATATAATATATAATTATAAATATAGTATATAATTATAATTATA	<7.3>	.	.	Motif=AATATA	GT:AD:DP:PL	1/1:0,5:5:131,15,0	1/1:0,1:1:26,3,0	1/1:0,0:1:3,1,0
-chr21	14094056	chr21:14094056:M	AATAAATAAATAAATAAATAAATAAATAAATAAAT	<6.8>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,14:18:255,50,0	1/1:0,7:10:174,26,0	1/1:0,0:4:9,3,0
-chr21	14094088	chr21:14094088:M	AATTAATTAATTAATTTAATT	<2.2>,<7.2>,<8.2>	.	.	Motif=AATT	GT:AD:DP:PL	2/3:0,0,13,14:27:255,255,255,230,230,151,213,214,0,135	1/2:0,2,8,0:10:255,206,210,76,0,52,200,125,75,178	1/3:0,7,0,8:15:255,215,194,255,128,255,255,0,255,238
-chr21	14095297	chr21:14095297:M	TTTTTTTGTTTGTTTTTTGCTTTTTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,0:21:45,0,250	0/1:3,4:11:103,0,68	0/1:1,2:8:77,0,15
-chr21	14097272	chr21:14097272:M	TTTTTTATTTTTATTTTTATTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:29:200,0,183	0/1:10,9:19:106,0,124	1/1:0,21:21:255,62,0
-chr21	14100420	chr21:14100420:M	AAAAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20,0:34:255,0,255,255,255,255	0/2:12,3,15:31:255,206,255,0,255,255	1/2:0,16,16:33:255,255,190,255,0,202
-chr21	14100728	chr21:14100728:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/1:12,10:24:71,0,110	0/0:12,0:14:0,37,169	1/1:3,17:20:188,16,0
-chr21	14102653	chr21:14102653:M	AAAAAAAGAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:30:117,0,255	0/1:16,11:27:115,0,205	1/1:0,36:36:255,106,0
-chr21	14106744	chr21:14106744:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,16,10:27:255,166,213,255,0,255	0/1:11,19,0:30:247,0,106,255,163,255	0/2:12,0,11:23:132,197,255,0,183,150
-chr21	14107600	chr21:14107600:M	ACTCACTCACT	<1.8>	.	.	Motif=ACTC	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/1:9,19:28:255,0,81	0/1:23,25:48:255,0,255
-chr21	14110338	chr21:14110338:M	ATTTTTTTATTTATTTGTTTATTT	<5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:29,17:46:191,0,255	0/1:16,17:33:210,0,191	0/0:38,0:38:0,112,255
-chr21	14111844	chr21:14111844:M	TTTTGTTTTGTTTT	<2.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:26,17:43:255,0,255	1/1:0,39:39:255,117,0	0/1:25,23:48:255,0,255
-chr21	14114178	chr21:14114178:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,1,15:26:202,242,255,0,113,103	1/2:1,13,11:25:255,173,240,207,0,255	0/1:12,9,1:22:98,0,162,142,164,255
-chr21	14116010	chr21:14116010:M	GTGTGTGGGAGTGTGTGGGTGTGTGTG	<8.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:15,15:30:255,0,255	0/1:14,17:31:255,0,255
-chr21	14129799	chr21:14129799:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:3:26,7,0	1/1:0,3:5:46,12,0	1/1:0,0:2:14,5,0
-chr21	14129810	chr21:14129810:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:42:255,0,255	0/0:30,0:31:0,90,255	0/1:20,28:51:255,0,255
-chr21	14138203	chr21:14138203:M	AAAAATAAAAATAAA	<2.7>	.	.	Motif=AAAAAT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:19,12:31:214,0,255	0/1:32,20:52:255,0,255
-chr21	14141387	chr21:14141387:M	TTTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,24,18:42:255,255,220,255,0,255	0/1:17,17,0:36:255,0,255,255,255,255	0/2:22,2,23:50:255,255,255,0,255,255
-chr21	14141628	chr21:14141628:M	TTGTTGTTGTTTTGTTGT	<5>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,44:44:255,129,0	0/1:20,9:29:69,0,255	0/1:19,13:32:134,0,239
-chr21	14152072	chr21:14152072:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:10,11:21:150,0,131	0/0:6,0:6:0,18,109	0/1:6,7:13:93,0,74
-chr21	14163093	chr21:14163093:M	TATATATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,48:49:255,145,0	0/1:16,21:38:255,0,195	0/1:32,28:60:255,0,255
-chr21	14174541	chr21:14174541:M	TTTATTTTATTTTATTTTATTTTATTTT	<6.6>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:14,14:28:174,0,174	0/1:14,13:27:167,0,186
-chr21	14176176	chr21:14176176:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:20:105,0,141	1/1:0,14:14:242,41,0	0/1:12,7:20:76,0,155
-chr21	14176722	chr21:14176722:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:50:0,150,255	0/1:13,12:26:255,0,255	0/1:21,15:40:255,0,255
-chr21	14185883	chr21:14185883:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:45:0,134,255	0/1:17,18:36:255,0,255	0/1:18,13:33:255,0,255
-chr21	14191377	chr21:14191377:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:10:82,0,27	0/1:4,4:11:65,0,37	0/1:8,8:17:100,0,91
-chr21	14196127	chr21:14196127:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,18:19:255,55,0	1/1:0,27:27:255,79,0
-chr21	14196156	chr21:14196156:M	AAAAAAAAAAAACAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,1,3:25:17,36,255,0,255,255	1/2:0,7,4:16:255,76,34,152,0,117	0/1:23,6,1:31:97,0,255,96,255,255
-chr21	14197027	chr21:14197027:M	ACACACACACACACACACACACATACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:8,15:23:201,0,75	0/1:13,21:34:255,0,140
-chr21	14202992	chr21:14202992:M	AAACAAACAAAC	<2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:47,0:50:0,142,255	0/1:16,18:35:230,0,202	0/1:27,25:55:255,0,255
-chr21	14203857	chr21:14203857:M	AGAAAGAAAGAAA	<5.2>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:21,15:37:255,0,255	1/1:0,40:40:255,120,0	0/1:17,19:36:255,0,255
-chr21	14213003	chr21:14213003:M	ATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:11,8:19:203,0,254	0/1:28,12:40:255,0,255
-chr21	14213292	chr21:14213292:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	<12.8>,<13.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:0,4,7:11:247,130,100,64,0,43	2/2:0,0,15:16:255,255,255,45,44,0	1/2:0,9,7:16:255,126,82,140,0,119
-chr21	14214810	chr21:14214810:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:41:0,102,255	0/1:23,26:51:255,0,255	0/1:22,19:41:228,0,255
-chr21	14226620	chr21:14226620:M	AAAAAAAAAAAAAAAACAAACAAAAA	<25>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3,0:14:13,0,158,53,167,242	0/1:9,14,1:25:178,0,91,227,112,255	0/2:9,2,8:20:94,112,255,0,99,123
-chr21	14232691	chr21:14232691:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:33:0,77,255	0/1:12,13:27:152,0,136	0/0:27,1:33:0,75,255
-chr21	14235342	chr21:14235342:M	AAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1,0:45:0,114,255,135,255,255	0/2:20,0,7:27:119,178,255,0,255,255	0/1:24,14,0:39:150,0,255,255,255,255
-chr21	14235352	chr21:14235352:M	AGAGAGAGAGAGAGAGA	<9>	.	.	Motif=AG	GT:AD:DP:PL	0/0:40,0:41:0,79,226	0/0:33,0:34:0,66,187	0/1:20,14:36:14,0,46
-chr21	14243225	chr21:14243225:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/2:7,0,7:15:180,200,255,0,190,170	0/1:6,5,0:12:108,0,153,133,173,255	2/2:0,0,9:10:255,255,255,27,27,0
-chr21	14243744	chr21:14243744:M	GAAAGAAAGAGAGAAA	<3.5>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:21,17:38:255,0,255	0/0:32,0:32:0,96,255	1/1:0,38:38:255,114,0
-chr21	14250797	chr21:14250797:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:21:0,43,255	0/0:15,2:20:0,23,250	0/1:12,10:24:113,0,152
-chr21	14253390	chr21:14253390:M	TAAATAAATAAA	<2.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/0:37,0:37:0,106,255	0/0:50,0:50:0,144,255	0/1:24,23:51:197,0,249
-chr21	14254070	chr21:14254070:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/0:16,0,1:17:0,48,255,33,255,255	0/2:7,0,3:10:20,41,213,0,112,85	0/1:8,7,0:16:165,0,175,123,130,213
-chr21	14254572	chr21:14254572:M	ATATATATAATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/0:32,0:32:0,94,255	0/1:26,16:42:183,0,255
-chr21	14256500	chr21:14256500:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,3:19:28,0,255	0/0:23,0:23:0,69,255	1/1:0,13:15:255,41,0
-chr21	14257908	chr21:14257908:M	TTTCTTTGTTTCTTTCTTT	<6.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:11,4:17:52,0,226	0/0:12,0:12:0,36,255	1/1:0,15:19:255,31,0
-chr21	14258823	chr21:14258823:M	CAAAACAAAACAAAACAAACAAAA	<5>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/1:9,20:32:66,4,0	0/0:37,0:38:0,76,226	1/1:0,36:38:219,74,0
-chr21	14268220	chr21:14268220:M	ATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:14,20:34:255,0,171	0/1:8,13:21:179,0,84	0/1:21,9:30:84,0,255
-chr21	14270958	chr21:14270958:M	TATATATATATATATATATA	<13>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,8:34:164,0,255	0/0:21,0:26:0,57,255	0/1:1,7:24:239,0,5
-chr21	14270998	chr21:14270998:M	TATATATATATAATATA	<9.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,5,3:28:17,0,165,17,204,255	0/0:31,1,0:32:0,76,255,93,255,255	1/2:0,8,6:14:195,71,33,76,0,58
-chr21	14276705	chr21:14276705:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9,0:9:164,27,0,164,27,164	1/1:0,8,1:9:149,26,0,123,9,120	1/2:1,7,4:12:186,53,36,87,0,100
-chr21	14277463	chr21:14277463:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:38:0,83,255	0/1:20,10:31:82,0,255	0/1:18,6:33:64,0,253
-chr21	14291384	chr21:14291384:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:10:49,0,61	0/0:11,0:12:0,35,198	0/1:7,11:20:165,0,65
-chr21	14291457	chr21:14291457:M	GTGTGTGTGTGTGTGTGTGTGTGT	<8>,<14>,<15>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,20,1,14,0:35:255,255,255,255,245,255,255,0,255,255,255,255,255,255,255	3/4:0,0,2,10,10:22:255,255,255,255,255,255,179,179,142,115,199,201,115,0,141	1/2:0,19,19,0,0:40:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
-chr21	14292535	chr21:14292535:M	TGAATGAATGAATGAATGAATGAA	<7>	.	.	Motif=TGAA	GT:AD:DP:PL	0/1:21,23:44:255,0,255	0/1:12,16:28:208,0,136	0/1:22,18:40:221,0,255
-chr21	14295225	chr21:14295225:M	ACACACACACACATGCACACACACACGCACACACACACACATACACATATATATACACACACACACAC	<35>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,12:12:225,35,0	1/1:1,10:11:159,15,0	1/1:0,12:12:219,35,0
-chr21	14296463	chr21:14296463:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:38:255,92,0	1/1:0,34:36:255,105,0	1/1:1,33:35:255,84,0
-chr21	14297077	chr21:14297077:M	TTTATTTGTTTATTTACTTATTTTTATTTTTTATTTATTTATTATTTATTTATTTATTTATTCATTCATTTATTTATTTATTTATTT	<19.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:4,2:6:39,0,95	1/1:0,1:2:28,3,0	1/1:0,3:3:84,9,0
-chr21	14298756	chr21:14298756:M	ATATATATATATATATAT	<8>,<10.5>,<12>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,0,7,10:22:255,255,255,194,210,153,139,196,0,152	1/3:0,16,0,5:21:255,139,93,255,98,255,248,0,255,255	0/2:10,1,12,0:23:176,224,255,0,131,151,209,255,215,255
-chr21	14303560	chr21:14303560:M	AAAAAAAAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<40>,<44>,<51>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,9,5:14:255,255,255,134,135,108,245,245,0,230	1/3:0,11,0,4:15:255,105,74,255,107,255,255,0,255,255	2/3:0,0,1,5:8:175,177,179,132,134,125,45,45,0,30
-chr21	14304123	chr21:14304123:M	TGTGTGTGTGTGTGTGTGTGTGTGTTGTTTGTTTGTATGTGTG	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:14,0,24:38:255,255,255,0,255,153	0/1:10,11,0:22:255,0,224,255,175,255	0/2:16,0,18:34:231,255,255,0,255,195
-chr21	14312436	chr21:14312436:M	ACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:24,15:40:255,0,255	0/0:38,0:38:0,114,255	0/1:20,14:34:255,0,255
-chr21	14327266	chr21:14327266:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,22:38:255,0,186	0/0:21,2:24:0,35,255	0/1:9,16:26:226,0,88
-chr21	14340482	chr21:14340482:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:38:255,0,221	0/0:40,1:42:0,103,255	0/1:17,14:32:160,0,230
-chr21	14345905	chr21:14345905:M	AAGGAAGGAAGGAAGGAAGGAAGG	<7>	.	.	Motif=AAGG	GT:AD:DP:PL	1/1:2,8:10:76,3,0	0/0:18,2:20:0,31,196	1/1:0,11:11:137,30,0
-chr21	14351353	chr21:14351353:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,16:24:225,0,76	0/0:20,3:24:0,18,255	0/1:12,16:30:220,0,129
-chr21	14351997	chr21:14351997:M	ATATATATATATATATAATATATATATATA	<14>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:2,4:6:55,0,18	1/1:0,23:23:255,68,0
-chr21	14355255	chr21:14355255:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<16>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,7:11:104,0,22	1/1:0,14:14:241,41,0	1/1:0,13:14:239,41,0
-chr21	14366385	chr21:14366385:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:11,10:22:122,0,130	0/0:41,2:44:0,93,255
-chr21	14366686	chr21:14366686:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:23:0,49,255	0/1:9,9:18:102,0,102	0/0:20,1:22:0,46,255
-chr21	14369241	chr21:14369241:M	CCAGCCCAGCC	<2>	.	.	Motif=CCAGC	GT:AD:DP:PL	0/1:14,16:30:255,0,255	0/1:19,17:36:255,0,255	0/0:37,0:37:0,111,255
-chr21	14378625	chr21:14378625:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:36:0,106,255	0/1:17,8:26:147,0,255	0/0:32,0:34:0,101,255
-chr21	14389997	chr21:14389997:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12>,<16>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,24,0,11:36:255,201,234,255,191,255,255,0,255,255	1/2:0,16,16,0:32:255,255,255,255,0,255,255,255,255,255	3/3:0,0,4,24:28:255,255,255,255,255,255,82,84,10,0
-chr21	14391124	chr21:14391124:M	TTTGTTTGTTTGTTTG	<3>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:42,0:44:0,115,255	0/1:25,19:47:232,0,255	0/0:50,0:54:0,127,255
-chr21	14391868	chr21:14391868:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,5:41:0,36,255	0/1:15,6:22:30,0,143	0/0:31,4:35:0,44,255
-chr21	14394492	chr21:14394492:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:15:0,39,255	0/1:9,4:14:76,0,196	0/0:11,0:13:0,36,255
-chr21	14394572	chr21:14394572:M	GGGAGAGGGAGAGAGAGAG	<2.2>	.	.	Motif=GGGAGA	GT:AD:DP:PL	0/1:13,17:30:240,0,161	1/1:0,51:51:255,150,0	0/0:26,0:27:0,77,255
-chr21	14395059	chr21:14395059:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:38:213,0,255	0/1:14,18:36:241,0,151	0/0:42,2:46:0,89,255
-chr21	14396299	chr21:14396299:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,25:55:255,0,255	1/1:0,45:46:255,135,0	0/0:42,3:45:0,78,255
-chr21	14403219	chr21:14403219:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,25:38:255,0,131	0/1:17,13:31:139,0,218	0/0:29,1:30:0,70,255
-chr21	14403381	chr21:14403381:M	TTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTGTATTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:37,0,20	1/1:1,7:8:101,7,0	0/0:14,0:14:0,41,243
-chr21	14405802	chr21:14405802:M	TATTTACTTATTTATTT	<3.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:15,27:42:255,0,255	0/1:31,23:55:255,0,255	0/0:45,0:46:0,135,255
-chr21	14405812	chr21:14405812:M	TTTATTTTTATTTT	<1.7>	.	.	Motif=TTTATT	GT:AD:DP:PL	0/1:16,27:43:255,0,255	0/1:32,25:57:255,0,255	0/0:46,0:46:0,138,255
-chr21	14413530	chr21:14413530:M	TATTTTTATTTTATTTT	<3.5>	.	.	Motif=TATTTT	GT:AD:DP:PL	0/1:18,21:39:255,0,255	0/1:16,18:34:255,0,255	0/0:52,0:52:0,156,255
-chr21	14425316	chr21:14425316:M	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTATTTT	<7.6>,<8.6>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/2:0,17,10:27:255,189,113,255,0,248	1/2:0,10,7:17:255,126,77,179,0,131	0/2:12,0,9:21:196,166,255,0,255,255
-chr21	14429727	chr21:14429727:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:42:255,0,255	0/1:18,10:35:232,0,255	0/1:17,23:41:255,0,255
-chr21	14433765	chr21:14433765:M	ACAAACAAACAAACAAAC	<4.8>	.	.	Motif=ACAA	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,38:38:255,114,0	0/1:18,24:42:255,0,255
-chr21	14436442	chr21:14436442:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:23,3,0	1/1:0,4:4:137,12,0	1/1:0,0:1:22,3,0
-chr21	14436859	chr21:14436859:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,1:2:39,15,12,17,0,12	1/2:0,1,4:5:79,55,52,16,0,2	1/2:1,3,5:9:125,55,71,34,0,26
-chr21	14438576	chr21:14438576:M	AAAAAAAAAAAAAAAAAA	<19>,<21>,<22>,<25>	.	.	Motif=A	GT:AD:DP:PL	2/4:0,0,5,0,7:12:255,255,255,198,198,183,255,255,198,255,148,143,0,89,127	3/4:0,0,1,3,3:8:195,194,193,127,127,116,93,93,76,82,102,101,34,0,90	1/2:0,9,8,0,0:20:255,216,188,150,0,221,255,143,255,255,255,228,255,255,255
-chr21	14449137	chr21:14449137:M	TCTTTCTTTCTTTCTTTCTTT	<7.2>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:11,7:22:120,0,255	0/1:11,6:21:93,0,255	0/0:25,0:27:0,75,255
-chr21	14449155	chr21:14449155:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,5:14:97,0,168	0/1:9,6:18:104,0,200	0/1:13,0:20:1,0,255
-chr21	14451021	chr21:14451021:M	TTCTTCTCCTTCATTCTTCT	<6.3>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:22,19:41:255,0,255	0/1:21,19:40:255,0,255	0/0:43,0:43:0,129,255
-chr21	14452766	chr21:14452766:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,15:21:217,0,21	0/1:15,6:21:41,0,196	0/1:8,13:23:164,0,87
-chr21	14476391	chr21:14476391:M	AGAGAGAAAGAAAGAGAGAGAGAGA	<67.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:17,4:21:0,22,255	0/1:13,8:21:19,0,255	0/0:45,0:45:0,135,255
-chr21	14487330	chr21:14487330:M	TTTATCTTATTTATTTTTTAT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:24,16:44:34,0,126	1/1:0,20:22:158,37,0	0/0:44,0:45:0,106,255
-chr21	14487348	chr21:14487348:M	TATATATATATAT	<7.5>,<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:25,5,13:43:236,233,255,0,255,255	1/2:0,6,15:21:255,255,255,93,0,115	0/0:45,0,0:46:0,131,255,136,255,255
-chr21	14493575	chr21:14493575:M	ACACACACACACACACACACACACACACACACACACACA	<16.5>,<20.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,8,0:19:255,139,189,255,0,255,255,139,255,255	1/3:0,13,2,8:23:255,216,207,255,100,255,255,0,255,255	0/2:8,0,5,1:15:55,96,255,0,147,107,55,255,130,255
-chr21	14499492	chr21:14499492:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,10:34:255,180,95,255,0,255	1/2:0,18,15:34:255,255,159,255,0,223	2/2:0,3,31:36:255,255,255,101,46,0
-chr21	14507839	chr21:14507839:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11,0:24:136,0,173,203,206,255	0/1:19,14,1:37:174,0,240,254,255,255	0/2:19,1,17:39:210,255,255,0,255,247
-chr21	14513502	chr21:14513502:M	TGTGTGTGTTTGTGTGTGCGTGTGTGTGTGTCTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:28,19:47:227,0,255	0/1:8,20:28:255,0,62	0/1:19,12:31:134,0,255
-chr21	14521901	chr21:14521901:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,38:41:255,65,0	1/1:2,33:35:255,68,0	0/1:23,25:50:255,0,255
-chr21	14527761	chr21:14527761:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:21,0,49	0/1:1,4:7:117,0,9	0/1:0,3:4:76,0,5
-chr21	14530317	chr21:14530317:M	AAAAAAAAAAAAAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:7:85,0,15	1/1:0,1:2:32,4,0	0/0:4,0:7:0,21,161
-chr21	14534517	chr21:14534517:M	TTTTTTTCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,2:23:0,31,255	0/0:20,3:23:0,15,255	0/1:19,18:38:217,0,245
-chr21	14541324	chr21:14541324:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,14:37:255,0,255	0/1:14,22:37:255,0,255	0/1:14,17:35:255,0,255
-chr21	14541988	chr21:14541988:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:21,1,17:40:255,255,255,0,255,255	0/2:19,1,18:39:255,255,255,0,255,255	0/1:24,21,2:49:255,0,255,255,255,255
-chr21	14545537	chr21:14545537:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/0:31,1:32:0,76,255	0/1:29,21:50:237,0,255
-chr21	14546670	chr21:14546670:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,27:42:255,0,139	0/1:19,24:48:255,0,214	0/1:22,23:45:255,0,255
-chr21	14549929	chr21:14549929:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:41:0,120,255	0/0:38,0:41:0,119,255	0/1:19,15:35:255,0,255
-chr21	14554683	chr21:14554683:M	TTTTGTTTTCTTTTTCTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:11:23,0,96	0/1:7,5:13:48,0,93	0/1:2,2:6:19,0,39
-chr21	14569129	chr21:14569129:M	TAAAAAAAAAAATAAAAATA	<3.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/1:23,22:45:255,0,255	0/1:21,17:39:255,0,255	0/0:28,2:31:0,43,255
-chr21	14584000	chr21:14584000:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:255,0,255	0/1:18,19:41:255,0,255	1/1:0,29:32:255,95,0
-chr21	14587745	chr21:14587745:M	TTATTTATTTATTTATTTATTTTTTA	<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:20,25:49:255,0,203	0/1:12,6:18:43,0,137	0/0:27,0:28:0,79,255
-chr21	14605808	chr21:14605808:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<11.2>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:23,0:27:0,59,255	0/1:4,4:8:50,0,50	0/0:16,0:16:0,47,255
-chr21	14615314	chr21:14615314:M	AAAAAAGAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,17:36:217,0,255	0/0:61,0:61:0,179,255	1/1:0,39:39:255,115,0
-chr21	14615864	chr21:14615864:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,0:1:0,0,0	0/0:2,0:4:0,6,54	1/1:0,3:4:82,9,0
-chr21	14618651	chr21:14618651:M	TGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15>,<17>,<20>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,2,12:17:211,242,255,169,255,255,71,71,0,34	2/3:1,0,10,13:29:255,255,255,181,255,255,251,250,0,217	1/2:0,15,12,0:33:255,255,243,255,0,255,255,255,255,255
-chr21	14618710	chr21:14618710:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,9:25:73,0,169	0/0:43,0:45:0,127,255	0/0:27,5:33:0,17,255
-chr21	14649773	chr21:14649773:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,11,7:19:255,183,149,189,0,255	1/2:0,10,8:19:255,210,178,168,0,252	1/1:2,27,0:29:255,52,0,255,87,255
-chr21	14653851	chr21:14653851:M	ACACACACACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,58:58:255,174,0	1/1:0,35:35:255,105,0	1/1:0,52:52:255,156,0
-chr21	14660177	chr21:14660177:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,19,9:30:255,182,102,255,0,255	1/2:2,14,11:27:255,157,116,173,0,190	1/1:0,41,1:42:255,123,0,255,106,255
-chr21	14667322	chr21:14667322:M	ATATATATATATATATATATATATATATATATATATATATATATATATAT	<10>,<14>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,13,12:30:255,255,255,255,0,255	1/1:0,13,0:14:255,40,0,255,40,255	2/2:0,0,8:10:255,255,255,30,30,0
-chr21	14671988	chr21:14671988:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:54,0:55:0,162,255	0/1:19,10:30:98,0,247	0/0:40,0:41:0,120,255
-chr21	14672151	chr21:14672151:M	TTTTTTTTTTTTTTTT	<12>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,13:37:255,255,255,255,0,255	1/2:1,14,14:29:255,224,255,255,0,255	2/2:1,0,21:28:255,255,255,63,82,0
-chr21	14683617	chr21:14683617:M	GAAGGAAGGAAGGAAAGAAGAAAGGAAGAAAGGAAGGTAGGAAGGAGGGAAGGAAGGAAGG	<16.2>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:2,6:11:68,4,0	0/0:6,0:7:0,8,58	1/1:0,4:6:68,16,0
-chr21	14683660	chr21:14683660:M	GGAGGGAAGGAAGGAAGGCAGGGAGGGAGGGAGGGAAGGGA	<11.2>	.	.	Motif=GGAG	GT:AD:DP:PL	0/1:12,4:16:14,0,140	0/0:5,1:6:0,3,60	1/1:0,2:3:30,6,0
-chr21	14693109	chr21:14693109:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:35:225,0,206	0/1:12,11:25:122,0,158	0/1:18,11:29:116,0,243
-chr21	14693958	chr21:14693958:M	ACACACACACACACACACACACACACACACACACA	<15.5>,<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22,0,0:23:255,69,0,255,69,255,255,69,255,255	1/2:3,13,7,0:23:255,68,185,255,0,255,255,220,255,255	1/3:0,13,0,9:23:255,255,219,255,242,255,255,0,255,255
-chr21	14701868	chr21:14701868:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,21:41:255,0,244	0/0:29,0:29:0,85,255	1/1:2,42:45:255,96,0
-chr21	14702524	chr21:14702524:M	TTTTTTTGTTTTTTGTTTTTTTTTGTATTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:36:255,105,0	0/1:18,16:34:184,0,220	0/1:12,20:32:255,0,126
-chr21	14706667	chr21:14706667:M	GAATTAATGAATGAATGAAT	<6>	.	.	Motif=GAAT	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/0:29,0:29:0,85,255	0/1:24,17:41:197,0,255
-chr21	14710598	chr21:14710598:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:11:5,0,131	0/1:8,2:12:3,0,120	0/1:4,5:11:62,0,56
-chr21	14717701	chr21:14717701:M	AAAGAAGAAAGAAAGAAAGAAA	<6.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:56,0:56:0,164,255	0/1:15,15:33:183,0,199
-chr21	14718249	chr21:14718249:M	AAACAAACAAACAAACAAACAAACA	<8.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:55,0:55:0,165,255	0/0:33,0:33:0,99,255	0/1:15,18:33:255,0,255
-chr21	14724402	chr21:14724402:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:5:0,15,84	0/1:3,3:9:27,0,47	0/0:10,0:11:0,32,181
-chr21	14731524	chr21:14731524:M	TTTTCTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23,1:25:255,69,0,255,53,255	1/2:1,4,11:17:237,140,152,51,0,23	1/2:0,11,3:14:255,45,12,190,0,153
-chr21	14732360	chr21:14732360:M	TTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:99,17,0	1/1:0,6:10:127,24,0	1/1:0,8:10:164,29,0
-chr21	14733281	chr21:14733281:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,3:6:106,46,30,39,0,30	0/2:2,1,1:5:19,3,22,0,17,41	1/1:1,5,0:6:63,2,0,66,17,89
-chr21	14734369	chr21:14734369:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:41:255,119,0	1/1:1,39:43:255,108,0	1/1:0,33:34:255,99,0
-chr21	14740792	chr21:14740792:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:1,47:48:255,123,0	1/1:1,51:52:255,135,0
-chr21	14744410	chr21:14744410:M	AAAAAAACAAAACAAAACAAAACAAAACAAAACAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:13,21:34:255,0,255	0/1:13,9:22:174,0,255
-chr21	14751721	chr21:14751721:M	AAAGGAAAAAAAAGGAGAGGAGAGAACAGGAAAGGAGAGAAGAGGAGAAGAAAGGAAAGGAA	<2.4>,<10.4>	.	.	Motif=AAAGG	GT:AD:DP:PL	0/2:13,4,8:28:108,59,255,0,161,215	0/1:5,8,1:17:178,0,159,184,140,255	0/1:8,8,1:32:155,0,255,184,255,255
-chr21	14753289	chr21:14753289:M	AATTGAATTGA	<2>	.	.	Motif=AATTG	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:23,22:45:255,0,255	0/1:22,33:55:255,0,255
-chr21	14757527	chr21:14757527:M	ACACGCACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,13:34:255,0,255	1/1:0,30:30:255,90,0	0/1:28,13:42:255,0,255
-chr21	14760579	chr21:14760579:M	AAATAAATAAATAAAAAAAT	<4.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:20,14:34:218,0,255	0/1:16,8:24:110,0,255
-chr21	14765576	chr21:14765576:M	ACACACACACACACACACACACACACACACACACA	<14.5>,<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,2,27,0:30:255,255,255,89,48,0,255,255,89,255	2/3:0,3,18,11:34:255,255,255,255,255,255,255,255,0,255	1/2:0,15,7,0:24:255,126,57,255,0,225,255,127,255,255
-chr21	14768444	chr21:14768444:M	ACACACACACACACACACACACACA	<15.5>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,13,0:29:255,0,255,240,255,255	1/2:0,11,10:21:255,176,115,193,0,133	0/0:31,0,0:33:0,99,255,99,255,255
-chr21	14785448	chr21:14785448:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:1,31:33:255,79,0	0/1:18,25:44:255,0,209
-chr21	14788176	chr21:14788176:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,16:20:230,0,13	0/1:4,7:14:83,0,52	0/1:10,9:19:103,0,121
-chr21	14789973	chr21:14789973:M	TATATATATATATATATATATAAAAAATATATATA	<20.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,8,3:12:255,85,56,219,0,203	1/1:0,2,0:3:70,9,0,69,9,69	0/2:5,0,5:10:121,133,255,0,136,122
-chr21	14790818	chr21:14790818:M	TTTTTTTTCTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,21:22:255,64,0	0/1:9,18:29:255,0,81
-chr21	14795164	chr21:14795164:M	AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA	<12.7>,<14.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:5,16,0:21:255,0,92,255,139,255	1/1:0,7,0:9:247,27,0,221,21,211	0/2:7,0,5:12:118,139,255,0,193,175
-chr21	14797770	chr21:14797770:M	AAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:16:255,44,0	1/1:0,17:20:255,56,0	0/1:2,13:16:255,0,7
-chr21	14820939	chr21:14820939:M	AAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,3:4:96,12,0	0/1:5,2:9:43,0,132
-chr21	14825456	chr21:14825456:M	AAAAAAAAAATAAAAATAAAAGAAAAATAAACAAGAAAAAAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,17:18:255,50,0	0/1:10,14:24:183,0,111
-chr21	14836431	chr21:14836431:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,18:24:255,0,4	0/1:5,18:26:255,0,12	0/1:23,10:37:92,0,255
-chr21	14863039	chr21:14863039:M	AAAAAAAATAAAAATAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:11,17:28:226,0,117	0/1:24,15:39:166,0,255
-chr21	14871742	chr21:14871742:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,6:16:139,0,156	0/0:10,0:12:0,33,255	0/1:10,6:16:116,0,232
-chr21	14872982	chr21:14872982:M	AAAAAAAAAAAACAAGAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:11,12:23:143,0,125	0/0:26,1:28:0,62,255
-chr21	14883019	chr21:14883019:M	AAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,11,63	1/1:0,4:6:78,15,0	0/0:9,0:9:0,26,152
-chr21	14885045	chr21:14885045:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,15:19:255,56,0	1/1:0,9:9:239,27,0
-chr21	14892865	chr21:14892865:M	ATATATATATATATATA	<9>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,7:12:148,108,88,18,0,38	2/2:0,0,0:1:0,0,0,0,0,0	1/2:1,2,8:11:162,123,105,5,0,16
-chr21	14893828	chr21:14893828:M	GTGTGTGTGTGTATGTATGTGTGTGTGTGTGTGTGTG	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:22,0:22:0,66,255	0/1:19,12:33:251,0,255
-chr21	14897623	chr21:14897623:M	ATATATATATAT	<5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,23:38:255,0,178	1/1:0,48:48:255,142,0	0/0:48,0:48:0,142,255
-chr21	14899220	chr21:14899220:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,11:29:250,0,255	1/1:0,13:17:255,39,0	0/0:28,0:31:0,90,255
-chr21	14946845	chr21:14946845:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<10.8>,<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/3:0,0,7,4:11:255,245,225,78,77,46,136,117,0,105	1/2:0,8,8,0:16:255,145,100,124,0,100,255,124,145,255	1/3:1,16,0,5:22:255,119,86,255,93,255,255,0,255,255
-chr21	14948325	chr21:14948325:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,13,0:22:255,0,164,239,141,255	0/2:10,2,10:22:128,110,255,0,136,108	1/2:0,18,7:27:255,104,47,255,0,254
-chr21	14956663	chr21:14956663:M	AAAAAGAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:25:255,53,0	0/1:11,10:22:100,0,125	0/1:16,18:36:198,0,185
-chr21	14960673	chr21:14960673:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,16:38:196,0,255	0/1:17,16:36:198,0,205	0/0:31,2:35:0,65,255
-chr21	14961996	chr21:14961996:M	ATATATATATATATACATATTATATATATATATATATATATATATATAAAATATATA	<24.5>,<25.5>,<26.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,9,0:18:255,165,113,165,0,113,255,140,164,255	1/1:0,2,0,0:2:62,6,0,41,6,35,61,6,40,59	2/3:0,0,2,3:5:135,115,110,53,53,39,36,30,0,21
-chr21	14964173	chr21:14964173:M	CTTTTTTTTTTCTTTTT	<2.7>	.	.	Motif=CTTTTT	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,48:48:255,144,0	1/1:0,40:40:255,120,0
-chr21	14973679	chr21:14973679:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,16:25:223,0,94	1/1:1,13:20:187,8,0	0/1:12,14:29:183,0,145
-chr21	14973844	chr21:14973844:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13,0:14:219,23,0,222,41,247	0/1:2,8,0:10:108,0,5,114,34,166	1/2:1,6,5:13:197,70,54,72,0,83
-chr21	14975627	chr21:14975627:M	AAAAAAAAAAAAAAAAAA	<13>,<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,6,3:17:255,156,166,180,0,162,239,51,135,214	2/3:0,0,7,7:17:255,255,255,97,116,68,143,142,0,102	1/3:2,3,0,14:19:233,203,255,239,255,255,40,0,74,28
-chr21	14975659	chr21:14975659:M	GAGAGAGAGAGAGA	<5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:19,13:32:228,0,255	0/0:34,0:34:0,102,255	0/1:18,13:31:243,0,255
-chr21	14975670	chr21:14975670:M	AGAAAGAAAGAAAG	<2.5>	.	.	Motif=AGAA	GT:AD:DP:PL	0/0:14,2:16:0,18,165	0/1:5,3:8:18,0,44	0/0:29,1:30:0,71,255
-chr21	14981853	chr21:14981853:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,13,9,0:24:255,132,200,206,0,255,255,169,255,255	2/3:2,0,9,5:16:220,253,255,52,82,41,98,157,0,133	1/2:1,11,9,0:21:255,144,200,180,0,255,255,162,255,255
-chr21	14982699	chr21:14982699:M	TTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTTT	<21>,<32>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,25:26:255,255,255,66,75,0	1/2:0,12,10:24:255,174,247,255,0,255	2/2:0,0,23:25:255,255,255,73,75,0
-chr21	14983213	chr21:14983213:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:42:255,0,217	0/1:23,18:45:212,0,255	0/0:46,2:51:0,111,255
-chr21	14984368	chr21:14984368:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:13,11:24:120,0,156	0/0:36,0:37:0,108,255
-chr21	14988422	chr21:14988422:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGATAGATAATATAGATAGATAG	<16>,<16.5>,<17.5>,<18.5>	.	.	Motif=TAGA	GT:AD:DP:PL	2/3:2,1,4,6,0:13:54,62,166,39,97,76,28,32,0,56,89,155,96,91,241	3/4:0,0,0,4,7:15:205,236,255,230,255,255,121,128,127,88,44,75,66,0,36	1/2:0,3,7,0,0:10:95,51,42,29,0,3,119,68,33,174,124,72,33,197,255
-chr21	14988500	chr21:14988500:M	TGTGTGTGTGTGTGTGTGT	<10.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:5,21,0:32:195,34,0,255,95,255	1/2:4,23,11:42:255,255,221,175,0,255	0/0:26,0,0:29:0,47,208,85,255,255
-chr21	14988518	chr21:14988518:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:48,0:48:0,135,255	0/0:36,0:44:0,120,255	0/1:20,19:44:173,0,149
-chr21	14995758	chr21:14995758:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/0:18,0:19:0,56,255	0/1:16,13:30:156,0,215
-chr21	15002474	chr21:15002474:M	ACACACACACACACACGCACCCACGCACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,8:22:89,0,204	0/1:10,10:22:127,0,126	0/0:29,0:29:0,86,255
-chr21	15014828	chr21:15014828:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,19:38:255,0,212	0/1:20,17:38:187,0,247	0/1:21,18:39:211,0,255
-chr21	15019471	chr21:15019471:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:140,15,0	1/1:0,5:6:158,18,0	.
-chr21	15024568	chr21:15024568:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,13:32:255,0,255	0/1:10,12:23:255,0,220	0/0:22,0:25:0,74,255
-chr21	15029826	chr21:15029826:M	AAATAAATAAATAAATAAATAATAAA	<5.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:17,10:27:104,0,231	0/1:17,22:39:255,0,207
-chr21	15033225	chr21:15033225:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,2:8:119,35,33,105,0,143	0/2:2,0,8:10:107,134,224,0,29,5	0/1:13,12,0:26:136,0,156,196,182,255
-chr21	15035557	chr21:15035557:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,0:17:0,49,255	0/1:13,8:24:67,0,182	0/0:15,3:19:0,3,221
-chr21	15043812	chr21:15043812:M	TTGTTTTTTTGTTTGTTTGTTTTTTG	<5.5>	.	.	Motif=TTGT	GT:AD:DP:PL	0/1:16,15:31:195,0,216	0/1:24,19:44:215,0,255	0/0:35,0:35:0,103,255
-chr21	15051273	chr21:15051273:M	TGTGTGTGTGTGCGCGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:50,0:50:0,150,255	0/1:23,8:31:129,0,255	0/0:36,0:36:0,108,255
-chr21	15070306	chr21:15070306:M	ACACACACACACACACACACACACACACA	<11.5>,<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:18,1,27:46:255,255,255,0,255,255	0/1:17,22,0:39:255,0,255,255,255,255	1/2:0,17,19:37:255,255,243,255,0,207
-chr21	15072949	chr21:15072949:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,23:49:255,0,255	0/1:22,14:37:255,0,255	1/1:0,47:48:255,144,0
-chr21	15074088	chr21:15074088:M	TTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:22:215,0,203	0/1:9,6:20:140,0,218	1/1:0,16:17:255,51,0
-chr21	15084468	chr21:15084468:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,19,0:32:255,0,218,255,187,255	0/0:17,0,1:22:0,63,255,33,255,255	1/2:2,19,7:28:255,87,145,255,0,255
-chr21	15087274	chr21:15087274:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:10:126,0,37	0/0:5,0:5:0,15,136	0/1:7,7:22:175,0,146
-chr21	15087819	chr21:15087819:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,21:40:255,0,238	0/0:39,2:43:0,90,255	0/1:20,14:35:161,0,255
-chr21	15090170	chr21:15090170:M	TATATATATATATATATATAT	<11.5>,<12.5>,<13.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,25,0,0:44:255,0,217,255,255,255,255,255,255,255	1/2:1,11,9,0:21:255,139,97,145,0,144,255,133,202,255	0/3:15,0,0,6:21:122,163,255,108,255,255,0,255,255,255
-chr21	15098083	chr21:15098083:M	TTTTTGTTTTTTGTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:15,15:30:180,0,177	0/1:20,18:38:222,0,253
-chr21	15100303	chr21:15100303:M	CTACTACTACTACTACTACTACTACTACTAC	<8.3>	.	.	Motif=CTA	GT:AD:DP:PL	1/1:0,37:38:255,114,0	1/1:0,49:49:255,147,0	1/1:0,40:40:255,120,0
-chr21	15106989	chr21:15106989:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,10,8:22:255,255,255,154,160,101,173,190,0,132	1/2:0,6,6,0:14:255,157,166,153,0,140,255,119,163,255	1/3:0,5,0,7:12:255,188,173,253,118,238,135,0,138,118
-chr21	15108169	chr21:15108169:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,21:23:255,67,0	0/1:8,10:20:126,0,82	0/1:11,16:28:202,0,122
-chr21	15115128	chr21:15115128:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:33:0,81,255	0/1:20,24:45:255,0,204	0/1:25,28:53:255,0,255
-chr21	15115145	chr21:15115145:M	TGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,30:30:255,88,0	0/1:23,19:42:188,0,253	0/1:29,22:51:219,0,255
-chr21	15116601	chr21:15116601:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:24:255,52,0	0/1:18,13:33:149,0,218	1/1:0,34:36:255,105,0
-chr21	15118986	chr21:15118986:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:82,10,0	0/1:4,3:7:29,0,46	0/0:5,0:5:0,15,85
-chr21	15120250	chr21:15120250:M	ATCTATCTATCTATCTGTCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATC	<19.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/0:21,0:24:0,63,255	0/1:8,5:14:98,0,195
-chr21	15128288	chr21:15128288:M	ACACACACACACACACACATACACACAAACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	0/1:15,20:35:255,0,167	1/1:0,30:30:255,89,0
-chr21	15136635	chr21:15136635:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:37:255,109,0	0/1:21,17:38:191,0,255	0/1:22,11:35:110,0,255
-chr21	15137363	chr21:15137363:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,10:14:133,0,23	0/1:14,9:25:100,0,161	1/1:1,11:19:166,10,0
-chr21	15138122	chr21:15138122:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,1,16:18:255,255,255,48,32,0	1/2:0,20,10:30:255,171,85,255,0,255	2/2:0,2,23:25:255,255,255,69,38,0
-chr21	15146923	chr21:15146923:M	AAAAAAAAAAAAAAACAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:19:255,53,0	0/1:17,5:27:22,0,249	0/1:10,9:20:101,0,130
-chr21	15149898	chr21:15149898:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,34:35:255,85,0	0/1:18,17:35:196,0,213	0/1:20,18:39:220,0,248
-chr21	15155800	chr21:15155800:M	CACACACACACACACACACACACACACACACACACACACAC	<19.5>,<21.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,8,7:15:255,255,255,189,190,162,138,209,0,188	1/3:2,10,0,3:16:191,49,45,223,75,255,143,0,255,255	0/2:4,0,14,0:18:188,238,255,0,58,16,238,255,70,255
-chr21	15170061	chr21:15170061:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,8:13:240,111,96,83,0,46	0/2:3,0,2:6:15,27,112,0,57,42	0/2:2,0,3:9:29,39,109,0,49,36
-chr21	15175812	chr21:15175812:M	AAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:7:92,32,30,25,0,42	0/2:6,1,2:9:30,18,89,0,82,142	0/2:2,0,2:4:43,32,54,0,32,43
-chr21	15176666	chr21:15176666:M	CTCTCTCTCTCT	<14.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,17:24:255,64,0	0/1:13,12:33:246,0,255	0/1:11,10:25:204,0,243
-chr21	15176677	chr21:15176677:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,11:34:175,0,255	0/0:29,1:36:0,66,255	0/0:21,1:24:0,41,255
-chr21	15177805	chr21:15177805:M	AATTAATTAATTAATT	<3.2>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,10:10:255,30,0	0/1:16,6:23:103,0,255	0/0:14,1:16:0,10,255
-chr21	15177819	chr21:15177819:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:25:255,52,0	0/1:13,13:28:255,0,255	0/1:13,11:26:236,0,255
-chr21	15192747	chr21:15192747:M	TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTT	<9.6>	.	.	Motif=TTTAA	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:0,11:11:199,32,0	0/1:5,8:13:111,0,55
-chr21	15195361	chr21:15195361:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:78,9,0	0/1:3,3:6:59,0,62	0/1:4,2:10:25,0,109
-chr21	15213460	chr21:15213460:M	AAAAAAAAAAAAAAGAGAAAAGAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/0:14,0:14:0,41,243	0/1:9,11:21:145,0,100
-chr21	15219706	chr21:15219706:M	AAAAAAAAAAAAAAACACAAAAAACAAAAAAAACAAAAACAAACAAACAAAAAA	<56>,<57>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,3:11:246,51,22,124,0,105	2/2:0,1,11:12:255,204,171,36,18,0	0/1:5,8,0:15:173,0,100,141,130,255
-chr21	15220733	chr21:15220733:M	TGTGCGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<21>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,5,3:21:255,94,38,128,0,104,187,15,124,255	2/3:0,1,7,9:18:255,255,250,120,107,71,88,57,0,47	0/1:20,8,0,0:30:16,0,187,82,255,255,104,255,255,255
-chr21	15220770	chr21:15220770:M	GAGAGAGAGAGAGAGAGAGA	<11>,<12>	.	.	Motif=GA	GT:AD:DP:PL	1/2:1,22,17:40:255,217,120,229,0,200	2/2:0,4,20:24:255,255,213,60,14,0	0/1:18,12,1:31:86,0,157,119,229,255
-chr21	15228415	chr21:15228415:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,8:19:70,0,117	0/0:21,1:22:0,48,255	0/1:6,12:18:133,0,41
-chr21	15229863	chr21:15229863:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/0:46,1:47:0,120,255	0/1:19,19:38:242,0,242
-chr21	15229909	chr21:15229909:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,54,0	1/1:0,17:21:255,57,0	1/1:1,24:27:255,49,0
-chr21	15232493	chr21:15232493:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,52:52:255,154,0	1/1:0,52:52:255,153,0	1/1:1,47:48:255,123,0
-chr21	15237230	chr21:15237230:M	TTTTTTTTTTTTTTTGTTTTGTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:14:225,31,0	1/1:1,9:11:148,15,0	0/1:3,10:14:136,0,20
-chr21	15239758	chr21:15239758:M	TATATATATATATATATATATATATATATATATATATATAT	<11.5>,<17.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:13:255,255,255,38,38,0	2/2:0,0,0:1:12,13,14,3,3,0	1/2:0,10,3:14:255,80,47,255,0,255
-chr21	15244443	chr21:15244443:M	AAAAAAAAAAAAAGAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,36:37:255,91,0	0/1:8,24:32:255,0,51
-chr21	15247964	chr21:15247964:M	ATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:1,3:7:0,3,15	0/0:0,1:2:0,0,4	0/1:0,2:3:1,0,2
-chr21	15249320	chr21:15249320:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,39:41:255,84,0	1/1:3,36:40:255,65,0	0/1:23,21:44:253,0,255
-chr21	15255821	chr21:15255821:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,1,4:12:52,25,142,0,52,57	1/2:0,3,5:8:142,68,59,49,0,26	0/0:14,0,0:14:0,42,255,41,255,239
-chr21	15269928	chr21:15269928:M	TTCTTCTTCTTCTCCTCCTTCTCCTCCTCCTCCTCCTTCTTCTCCTTCTTCTTCTTCTT	<20.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:8,9:17:106,0,89	0/0:14,0:14:0,41,231	0/1:5,5:11:62,0,53
-chr21	15272024	chr21:15272024:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<8.7>,<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,23,0:25:255,75,0,255,75,255	1/1:0,27,0:27:255,81,0,255,81,255	1/2:0,15,9:24:255,242,200,255,0,255
-chr21	15284786	chr21:15284786:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,23:23:255,69,0	0/1:16,16:32:255,0,255
-chr21	15296442	chr21:15296442:M	ATATATATATATATATATATATATATATATATATATATA	<9.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,13,1,17:39:255,255,255,255,209,255,255,0,255,255	1/1:0,30,0,0:37:255,110,0,255,108,255,255,110,255,255	2/3:1,0,3,4:10:188,191,218,43,70,45,11,38,0,11
-chr21	15297475	chr21:15297475:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<23>,<26>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,8,4,0:12:255,67,106,244,0,233,255,130,245,255	1/1:0,21,0,0:22:255,66,0,255,66,255,255,66,255,255	2/3:0,0,5,4:9:170,187,255,104,108,93,83,153,0,141
-chr21	15297578	chr21:15297578:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:40:255,0,241	1/1:1,39:40:255,100,0	0/0:32,1:33:0,79,255
-chr21	15298922	chr21:15298922:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATTAAATAAAT	<12.2>,<13.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,9,5:14:255,83,56,173,0,133	1/1:0,9,0:9:255,27,0,188,26,163	2/2:0,0,12:12:226,226,226,35,35,0
-chr21	15299858	chr21:15299858:M	CACACACACACACACACACACACACACACACATACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	0/2:11,0,9:20:197,152,255,0,185,251	0/0:19,0,0:19:0,55,255,57,255,255	1/2:0,6,14:20:255,233,178,85,0,43
-chr21	15304739	chr21:15304739:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:242,0,255	1/1:0,41:41:255,120,0	0/0:51,1:53:0,137,255
-chr21	15314370	chr21:15314370:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,11:17:255,255,255,35,0,52	2/2:0,0,11:14:255,255,255,41,41,0	1/1:1,4,0:7:64,1,0,79,18,148
-chr21	15314986	chr21:15314986:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:34:255,0,157	1/1:1,22:24:255,53,0	0/0:36,1:37:0,91,255
-chr21	15316699	chr21:15316699:M	TTTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,9:23:194,0,255	1/1:0,31:37:255,109,0	0/0:23,0:25:0,75,255
-chr21	15318711	chr21:15318711:M	TTTTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTT	<9>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:8,3:11:20,0,107	0/0:8,0:8:0,23,139	0/0:5,1:7:0,2,76
-chr21	15323545	chr21:15323545:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:21:29,0,212	0/0:26,3:32:0,31,255	1/1:3,24:30:255,13,0
-chr21	15339623	chr21:15339623:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:40,0,57	0/0:8,1:11:0,4,111	0/1:4,2:8:30,0,43
-chr21	15345747	chr21:15345747:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:219,0,255	0/0:37,1:40:0,99,255	0/1:14,18:33:232,0,169
-chr21	15350679	chr21:15350679:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,23:46:255,0,239	1/1:0,31:33:255,96,0	0/0:30,1:31:0,73,255
-chr21	15399504	chr21:15399504:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<14.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:12,16:29:255,0,195	0/0:21,0:24:0,68,255	0/1:13,12:26:201,0,232
-chr21	15403890	chr21:15403890:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:15:0,27,229	0/1:7,7:16:81,0,82	0/1:12,5:17:36,0,156
-chr21	15412255	chr21:15412255:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,11:25:255,0,255	0/0:37,0:38:0,114,255	0/1:7,12:21:255,0,129
-chr21	15421121	chr21:15421121:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:19:90,0,137	0/0:18,0:19:0,53,255	0/1:14,4:19:16,0,205
-chr21	15435488	chr21:15435488:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	0/1:1,3:5:43,0,2	0/1:1,1:2:10,0,10
-chr21	15445742	chr21:15445742:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,22:51:255,0,255	0/0:49,3:52:0,101,255	1/1:1,32:35:255,85,0
-chr21	15470779	chr21:15470779:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,10:22:170,0,187	0/1:14,7:25:114,0,255	0/0:16,0:18:0,49,255
-chr21	15470817	chr21:15470817:M	AGAGAGAGAGAGAGAGAGAGA	<11.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:14,15:31:139,0,106	0/1:16,8:26:50,0,142	0/0:29,0:32:0,90,255
-chr21	15471646	chr21:15471646:M	ACACACACACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,12:26:252,0,255	0/1:12,5:19:79,0,255	0/0:17,0:19:0,56,255
-chr21	15474415	chr21:15474415:M	AATAAAATAAAATAAAA	<2.8>	.	.	Motif=AATAA	GT:AD:DP:PL	0/1:18,16:34:255,0,255	0/1:14,17:31:255,0,255	0/0:43,0:43:0,129,255
-chr21	15495553	chr21:15495553:M	TTTTTTTGTTGTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,11:34:102,0,255	0/1:26,8:35:45,0,255	0/0:40,3:43:0,73,255
-chr21	15518170	chr21:15518170:M	ATATATATATATATATATATATATATATATA	<14.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,6:13:185,101,136,118,0,169	.	0/0:2,0,0:3:0,6,34,5,33,32
-chr21	15519444	chr21:15519444:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGT	<22>,<25>,<28>	.	.	Motif=TG	GT:AD:DP:PL	3/3:0,0,0,5:5:86,100,150,100,150,150,15,15,15,0	1/3:1,10,0,2:14:255,16,31,255,63,255,255,0,255,255	2/3:1,0,3,4:9:122,137,203,50,114,102,71,89,0,75
-chr21	15520130	chr21:15520130:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:21:0,60,255	0/1:10,5:16:85,0,230	0/0:19,0:20:0,57,255
-chr21	15526728	chr21:15526728:M	AAAAAAAAGAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:33:255,0,255	1/1:0,31:36:255,98,0	0/0:37,0:37:0,111,255
-chr21	15534095	chr21:15534095:M	ATATATATATATATATATATA	<11.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:17,1,11:29:241,188,255,0,255,255	1/2:0,11,7:19:255,132,80,165,0,141	0/0:36,0,0:36:0,106,255,108,255,255
-chr21	15540648	chr21:15540648:M	TTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTATTT	<9.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:6,17:32:60,7,0	1/1:0,16:19:88,29,0	0/0:10,2:34:0,14,65
-chr21	15552166	chr21:15552166:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:34:122,0,255	1/1:0,30:36:255,105,0	0/0:59,0:61:0,182,255
-chr21	15566192	chr21:15566192:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19>,<23>,<24>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,6,0:20:255,159,118,229,0,255,255,105,255,255	1/3:0,5,0,5:10:204,134,119,167,83,205,84,0,135,120	0/2:8,1,10,0:20:244,253,255,0,120,195,179,255,227,255
-chr21	15570044	chr21:15570044:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,1,6:21:46,88,255,0,194,202	0/2:13,0,6:20:54,109,255,0,185,164	1/2:3,8,3:15:116,7,48,103,0,212
-chr21	15572708	chr21:15572708:M	TATATATATATATATATATATATATATAT	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:13,1:17:0,25,211	0/0:2,0:2:0,6,33	1/1:0,7:7:120,20,0
-chr21	15575687	chr21:15575687:M	TTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,39:40:255,120,0	1/1:0,36:40:255,119,0
-chr21	15597540	chr21:15597540:M	GTGTGTCTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTATGTG	<12.2>	.	.	Motif=GTGT	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,25:25:255,75,0	1/1:1,26:28:255,49,0
-chr21	15601839	chr21:15601839:M	TCTCTCTCTCTCAATCTCTCTCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<28>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,12:13:255,39,0	1/1:0,14:14:255,42,0	1/1:0,21:23:255,68,0
-chr21	15601899	chr21:15601899:M	GTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<26>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,5,2:7:150,30,32,120,0,110	0/0:5,0,1:6:0,18,157,2,77,60	1/2:0,4,10:15:236,149,219,108,0,76
-chr21	15606237	chr21:15606237:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,103,0	0/1:12,10:22:112,0,146	1/1:1,34:35:255,85,0
-chr21	15606728	chr21:15606728:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/1:16,18:35:216,0,190	0/0:38,1:40:0,99,255
-chr21	15610775	chr21:15610775:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,1:8:0,6,102	0/1:5,4:10:45,0,52	0/0:11,0:12:0,35,193
-chr21	15625607	chr21:15625607:M	CACACACACACACACACACACACGCACACACACACACACA	<19>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/2:3,16,16:35:255,250,255,252,0,255	0/1:7,20,0:29:255,0,39,255,105,255	1/2:1,15,8:24:255,131,199,255,0,255
-chr21	15628454	chr21:15628454:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,13:27:255,0,180	0/1:4,14:20:255,0,34	0/1:12,10:25:189,0,220
-chr21	15628492	chr21:15628492:M	AGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGACAGAGAGAGAGA	<26.5>,<27.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:10,6,3:20:60,0,92,27,105,250	0/2:7,2,11:20:215,121,159,0,68,118	0/2:12,3,5:20:73,32,138,0,126,247
-chr21	15628596	chr21:15628596:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,51:52:255,135,0	0/1:22,25:47:255,0,255	1/1:0,48:48:255,142,0
-chr21	15629254	chr21:15629254:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,18,8,0:31:255,234,174,255,0,255,255,230,255,255	0/2:2,0,14,1:17:255,255,255,0,65,23,255,255,17,255	1/3:0,18,0,13:32:255,229,255,255,255,255,255,0,255,255
-chr21	15629909	chr21:15629909:M	AAAAAAAAAACAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:44:255,129,0	0/1:16,18:35:227,0,182	1/1:1,32:35:255,84,0
-chr21	15632312	chr21:15632312:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,21:43:255,0,255	0/1:21,26:48:255,0,245	0/1:35,28:63:255,0,255
-chr21	15636907	chr21:15636907:M	ATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:19,14:37:255,0,255	0/1:21,10:31:227,0,255	0/1:18,11:31:255,0,255
-chr21	15645363	chr21:15645363:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:16,15:33:255,0,255	1/1:0,37:38:255,114,0
-chr21	15648427	chr21:15648427:M	AAGAAAGAAAGA	<3.8>	.	.	Motif=AAGA	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:24,18:42:255,0,255	1/1:0,35:35:255,105,0
-chr21	15659543	chr21:15659543:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,6:16:57,0,120	0/1:15,6:23:34,0,201	0/1:12,5:17:35,0,155
-chr21	15664869	chr21:15664869:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,14:18:240,25,0	0/1:8,9:22:113,0,95	1/1:3,19:24:255,17,0
-chr21	15667565	chr21:15667565:M	ACACTACACACACACACACACACACACACACACAAATACACACACACA	<22>,<23>,<25>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,8,0:21:255,128,89,243,0,183,255,149,244,255	1/3:0,15,0,11:26:255,194,255,255,255,255,255,0,255,255	2/2:0,0,18,0:18:255,255,255,53,53,0,255,255,54,255
-chr21	15669218	chr21:15669218:M	AAAAAAAAAAAAAACAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:6,10:17:123,0,63	1/1:0,29:29:255,85,0
-chr21	15672189	chr21:15672189:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,10:15:192,7,0	1/1:0,16:18:255,52,0	1/1:1,13:16:241,29,0
-chr21	15678835	chr21:15678835:M	ACACACACACACACACACACACACACACACACACACA	<20.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,12,0:30:255,208,124,255,0,224,255,178,255,255	0/1:17,6,0,0:23:104,0,255,99,255,255,155,255,255,255	2/3:0,0,6,11:17:255,255,255,190,188,141,104,87,0,54
-chr21	15679780	chr21:15679780:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,92	0/0:9,0:9:0,26,150	0/0:10,1:11:0,15,154
-chr21	15704677	chr21:15704677:M	ACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	0/0:28,0:31:0,91,255	0/1:18,10:28:97,0,239	0/0:44,0:44:0,130,255
-chr21	15706489	chr21:15706489:M	ATATATATATATATGTGTGTGTATATATATATATATATATA	<24.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,11:21:255,63,0	0/0:12,0:14:0,14,255	1/1:0,11:16:255,48,0
-chr21	15706529	chr21:15706529:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<12.5>,<16.5>,<17.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,0,9,8:19:255,255,255,73,97,40,123,128,0,73	1/2:0,9,4,1:16:255,84,86,255,0,250,255,34,252,255	2/2:0,0,17,1:22:255,255,255,62,66,0,255,255,48,224
-chr21	15708937	chr21:15708937:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<26>,<27>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,3,0:7:164,170,180,21,21,0,109,110,17,92	1/2:0,5,2,0:10:213,57,65,146,0,149,188,30,146,180	2/3:0,0,1,3:10:138,151,212,39,63,34,74,78,0,55
-chr21	15712760	chr21:15712760:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:58,6,0	0/0:1,0:3:0,7,44	1/1:0,3:7:105,14,0
-chr21	15714379	chr21:15714379:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,5,10,0:16:209,163,250,74,0,107,254,255,143,255	1/3:0,9,0,9:19:255,246,217,255,247,255,163,0,255,240	2/2:0,0,20,0:20:255,255,255,59,60,0,255,255,60,255
-chr21	15730977	chr21:15730977:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3,1:6:34,0,27,34,12,87	1/1:0,4,0:6:76,14,0,87,14,122	0/2:3,0,5:8:61,84,184,0,42,27
-chr21	15750215	chr21:15750215:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,3:6:25,28,49,0,12,1	0/1:1,3,1:6:54,0,15,25,6,28	1/2:0,1,3:5:48,28,25,12,0,1
-chr21	15775740	chr21:15775740:M	CCCCCCCCCCCCCCCGCCCCC	<20>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,1:2:16,3,0	1/1:0,1:1:15,3,0	1/1:0,3:3:47,9,0
-chr21	15790651	chr21:15790651:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,2:24:0,34,255	0/0:19,1:22:0,47,255	0/1:6,9:17:118,0,67
-chr21	15806426	chr21:15806426:M	TTTCTTTTTTTTTTTTCTTTCTTTTCT	<5.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:1,34:35:255,84,0	1/1:0,28:28:255,83,0	1/1:0,44:44:255,130,0
-chr21	15827753	chr21:15827753:M	TGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<28.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:5,6:12:146,0,127	0/1:4,4:9:99,0,93	0/1:1,8:11:215,0,1
-chr21	15846123	chr21:15846123:M	TATATATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,4:11:49,0,10	0/0:1,0:1:0,3,13	0/1:1,0:5:1,0,8
-chr21	15860954	chr21:15860954:M	ATATATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,13,0:28:124,0,94,207,175,255	0/1:13,8,0:23:66,0,105,135,170,255	1/2:1,12,12:26:255,255,255,143,0,255
-chr21	15860976	chr21:15860976:M	AGAGAGAGAGAGAGAGAGAG	<13>,<14>	.	.	Motif=AG	GT:AD:DP:PL	0/1:9,12,0:23:255,0,191,177,231,255	0/2:9,1,12:22:255,143,255,0,218,195	0/1:19,13,0:38:255,0,255,222,255,255
-chr21	15862572	chr21:15862572:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/1:5,10:16:126,0,49	0/0:20,0:21:0,61,255
-chr21	15862749	chr21:15862749:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,31:51:255,0,204	0/0:47,0:48:0,140,255	0/1:19,30:50:255,0,209
-chr21	15864159	chr21:15864159:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:24:0,49,255	0/1:11,10:21:109,0,127	0/0:23,0:28:0,81,255
-chr21	15884470	chr21:15884470:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,1:17:0,31,255	0/1:8,4:12:33,0,101	0/0:12,2:15:0,8,183
-chr21	15891364	chr21:15891364:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,6,4:11:231,59,38,115,0,87	2/2:1,0,15:16:236,239,255,30,47,0	1/1:0,8,0:13:234,13,0,160,25,150
-chr21	15891808	chr21:15891808:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,18:36:225,0,225	0/1:15,8:24:70,0,199	0/1:16,17:36:201,0,211
-chr21	15895048	chr21:15895048:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,42:45:255,111,0	1/1:1,45:46:255,117,0
-chr21	15903621	chr21:15903621:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,6:7:170,21,0
-chr21	15905522	chr21:15905522:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,5:30:13,0,255	0/1:11,13:27:173,0,109	0/0:28,2:32:0,58,255
-chr21	15907947	chr21:15907947:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:4:23,0,23	1/1:0,5:5:83,15,0	0/0:8,0:8:0,23,136
-chr21	15956506	chr21:15956506:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,2:37:0,71,255	0/0:21,1:23:0,49,255	0/1:24,22:47:255,0,255
-chr21	15959355	chr21:15959355:M	ACACACACACACACACACACACACACGCACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,12:18:89,0,18	1/1:0,4:5:55,13,0	0/1:7,3:10:7,0,52
-chr21	15959397	chr21:15959397:M	ATATATATATATATATATATATATATATATATAT	<18>,<21>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,4:8:136,98,86,47,0,86	.	2/2:0,0,1:1:28,28,28,3,3,0
-chr21	15963134	chr21:15963134:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:32,0,120	0/0:11,1:13:0,21,177	0/1:11,4:18:20,0,158
-chr21	15971170	chr21:15971170:M	TATCTATCTATCTAATGTATCTTATCTATCTATCTATCTATCTATCTATCTATCTATGTATCTA	<18>,<19>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,3,3:6:163,57,40,57,0,40	1/2:0,8,8:16:255,144,98,143,0,98	1/1:0,8,0:10:238,25,0,156,7,129
-chr21	15974836	chr21:15974836:M	AAATAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<7.8>,<12.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/3:0,0,13,11:24:255,255,255,208,209,140,211,246,0,178	2/2:0,0,11,0:11:198,229,255,32,33,0,198,229,32,198	1/3:0,11,0,10:21:255,255,243,255,184,255,255,0,255,255
-chr21	15985762	chr21:15985762:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,11:15:255,195,157,44,0,8	0/2:4,3,9:18:229,123,143,0,23,67	1/2:1,12,7:20:255,100,60,152,0,157
-chr21	15987744	chr21:15987744:M	TATTTTGTTTTTTTAATTTTGTTTTATATTATTTTATTTTATTTT	<9.4>,<9.6>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:0,21,0:21:255,63,0,255,63,255	1/1:0,22,0:22:255,66,0,255,66,255	1/2:0,17,20:37:255,255,255,255,0,255
-chr21	15988227	chr21:15988227:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:2,39:41:255,85,0	0/1:22,16:38:188,0,255
-chr21	15993247	chr21:15993247:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,12:13:255,255,228,39,38,0	2/2:0,0,9:9:255,178,154,27,26,0	1/2:1,5,5:11:179,69,56,56,0,67
-chr21	16003384	chr21:16003384:M	AAAAAAGAAAAAAGAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,37:37:255,109,0	1/1:0,38:38:255,112,0
-chr21	16004974	chr21:16004974:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:28,0,9	0/0:2,0:2:0,6,34	0/1:1,4:5:57,0,3
-chr21	16008278	chr21:16008278:M	ACACACACACACACACACACACACACACA	<19.5>,<21.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,16,0:17:255,255,255,51,48,0,255,255,51,255	2/3:0,0,7,3:11:255,255,255,78,75,52,196,182,0,183	1/2:0,10,5,0:17:255,135,99,255,0,246,255,132,255,255
-chr21	16011788	chr21:16011788:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<10>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,34,0:36:255,108,0,255,108,255	1/1:0,33,0:35:255,105,0,255,105,255	1/2:0,14,9:24:255,238,196,255,0,255
-chr21	16012632	chr21:16012632:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,65,0	1/1:0,9:10:247,27,0	1/1:0,19:22:255,60,0
-chr21	16033977	chr21:16033977:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/0:29,1:33:0,76,255	0/1:9,12:25:159,0,109
-chr21	16036689	chr21:16036689:M	TTATTTATTTATTTATTTATTT	<6.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:34,0:34:0,100,255	0/1:9,14:23:195,0,102
-chr21	16052752	chr21:16052752:M	TTTTTTTTTCTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,18:36:227,0,227	0/1:21,13:34:128,0,255	0/0:34,0:34:0,100,255
-chr21	16057473	chr21:16057473:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:136,0,255	0/0:31,0:32:0,94,255	0/1:17,17:35:220,0,211
-chr21	16063690	chr21:16063690:M	ATCTATCCATCTATTACCTATCTATCTATCTATCTATCTATCTATATATCTATCTAT	<15.2>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:13,10:23:124,0,182	0/1:7,12:19:161,0,70	0/0:17,0:17:0,50,255
-chr21	16066252	chr21:16066252:M	TCTTTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTT	<10.8>,<11.5>,<13.5>	.	.	Motif=TCTT	GT:AD:DP:PL	1/3:0,3,0,3:12:160,114,105,136,96,142,46,0,63,73	2/3:0,0,4,0:7:93,85,79,18,17,5,73,65,0,70	2/3:0,2,4,6:20:195,162,155,96,75,93,50,17,0,72
-chr21	16071570	chr21:16071570:M	CCCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,4:7:135,9,0	.	1/1:0,2:3:76,9,0
-chr21	16091623	chr21:16091623:M	ATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,21:21:255,63,0	0/1:14,9:23:209,0,255	1/1:0,22:22:255,66,0
-chr21	16095631	chr21:16095631:M	AGATAGATAGCAGTAAGATAGGTAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<17.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/1:0,13:14:252,41,0	0/1:4,4:9:54,0,45	0/1:8,4:12:38,0,111
-chr21	16095995	chr21:16095995:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:255,44,0	1/1:2,21:23:255,33,0	1/1:1,22:23:255,50,0
-chr21	16097598	chr21:16097598:M	TGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,0:33:0,88,255	0/0:26,2:29:0,47,255	0/1:15,20:36:255,0,170
-chr21	16105071	chr21:16105071:M	TTTTTTTTGGTTTTGTTTTTGTTTTTTTTGTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/1:8,12:20:158,0,86	0/0:17,0:17:0,50,255
-chr21	16114233	chr21:16114233:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/0:23,1:26:0,56,255	0/1:16,8:26:67,0,229
-chr21	16116725	chr21:16116725:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,109,0	0/1:13,18:31:232,0,141	1/1:0,50:50:255,148,0
-chr21	16154947	chr21:16154947:M	AAATAAATAAATAAATAATAAATAAATAAATAAATAAATAAA	<33.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:9,3:12:6,0,229	0/0:7,0:8:0,21,206	0/0:10,1:11:0,19,255
-chr21	16157677	chr21:16157677:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:24:255,0,135	0/1:11,8:21:180,0,242	0/1:10,15:27:255,0,201
-chr21	16164271	chr21:16164271:M	TTTTCTCTTCTTTTCTTTTCTTTTCTTTTTTTTTTTT	<7.6>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:9,4:14:12,0,85	0/1:4,3:8:18,0,31	0/1:11,8:20:55,0,84
-chr21	16167144	chr21:16167144:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<21>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,12:25:255,213,255,255,0,255	1/2:0,14,12:26:255,204,255,255,0,255	1/2:0,14,12:30:255,233,255,255,0,255
-chr21	16171591	chr21:16171591:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,1:3:78,17,9,35,0,26	1/2:0,2,4:8:183,67,44,53,0,34	1/2:0,4,2:9:208,35,9,97,0,78
-chr21	16178919	chr21:16178919:M	AAAAAAAAAAAGAAAAGAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:0,38:39:255,114,0	1/1:2,37:39:255,79,0
-chr21	16182568	chr21:16182568:M	TCTCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:4,14:19:220,0,23	1/1:1,15:16:255,29,0	1/1:1,6:7:99,2,0
-chr21	16187807	chr21:16187807:M	TCCTTCCTTCCTCCTTTCCTTCTTTCCTTTCTTTCTTTCTTGCTTCCTTCCTTCCCTCCTTCCTTC	<5>,<8.2>,<18.5>	.	.	Motif=TCCT	GT:AD:DP:PL	2/3:0,1,3,10:15:255,255,255,234,222,239,75,49,0,45	1/3:0,3,0,7:10:232,163,166,240,175,252,77,0,77,56	2/3:0,1,6,5:13:255,242,246,117,98,106,151,125,0,136
-chr21	16189426	chr21:16189426:M	TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,60,0	1/1:0,29:31:255,90,0	1/1:0,24:25:255,73,0
-chr21	16192978	chr21:16192978:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,28:31:255,36,0	1/1:1,28:29:255,68,0	1/1:1,37:38:255,94,0
-chr21	16193863	chr21:16193863:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,14:29:255,243,172,208,0,173	1/1:3,15,1:19:218,4,0,201,38,255	1/2:0,6,14:20:255,243,189,90,0,48
-chr21	16193922	chr21:16193922:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,9,11:22:255,222,163,137,0,98	1/1:1,20,1:22:255,47,0,255,47,255	1/2:4,19,8:32:255,63,52,200,0,255
-chr21	16197311	chr21:16197311:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,8:25:144,0,255	1/1:0,22:27:255,45,0	0/0:35,0:37:0,111,255
-chr21	16205191	chr21:16205191:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:36:200,0,255	1/1:1,48:49:255,126,0	0/0:49,1:50:0,129,255
-chr21	16207977	chr21:16207977:M	ACACATACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,23:41:255,0,255	1/1:1,20:23:255,39,0	0/0:43,0:44:0,132,255
-chr21	16213875	chr21:16213875:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,26:42:255,0,183	1/1:0,48:48:255,141,0	0/0:32,2:34:0,63,255
-chr21	16218220	chr21:16218220:M	TATATATATATATAACATATATATATCTATATATATATATAGATATATATA	<26.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:9,1:10:0,11,146	1/1:0,2:2:35,6,0	0/1:6,3:9:28,0,80
-chr21	16220076	chr21:16220076:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,8:25:153,0,255	0/0:25,0:25:0,75,255	0/1:9,12:22:255,0,172
-chr21	16220124	chr21:16220124:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:23:162,0,215	0/0:9,0:11:0,27,228	0/1:5,3:11:53,0,105
-chr21	16226937	chr21:16226937:M	AAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:5:56,0,17	1/1:0,2:4:57,6,0	1/1:0,4:5:112,12,0
-chr21	16237993	chr21:16237993:M	TATATATATATATACACATATATATGAGAATATATATCTATATCTATATATATATAT	<30.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:20,0:20:0,58,255	0/0:15,0:15:0,44,248	0/1:9,7:20:96,0,98
-chr21	16238049	chr21:16238049:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,15:29:66,0,53	1/1:5,17:22:109,10,0	0/1:17,12:32:30,0,101
-chr21	16238083	chr21:16238083:M	TATATATATATA	<5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,9:30:19,0,127	0/0:21,1:22:0,47,205	0/0:20,5:29:0,11,161
-chr21	16239526	chr21:16239526:M	TTTTTCTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:16:47,0,105	1/1:1,6:8:88,8,0	0/1:11,7:21:52,0,124
-chr21	16247684	chr21:16247684:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,9,9:21:255,108,104,85,0,136	1/1:0,19,0:21:255,48,0,255,48,255	1/2:0,12,13:26:255,235,165,181,0,139
-chr21	16248034	chr21:16248034:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT	<13.8>	.	.	Motif=TATG	GT:AD:DP:PL	1/1:0,17:18:255,53,0	1/1:0,19:22:255,65,0	1/1:0,16:20:255,59,0
-chr21	16249011	chr21:16249011:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,27:30:255,51,0	1/1:1,26:29:255,67,0	1/1:0,27:27:255,79,0
-chr21	16249737	chr21:16249737:M	TTTTTTTCTTTTTTCTTTTTTTTTTTCTTTTCTTTTTTTTTTTTTT	<49>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:174,12,0	1/1:0,5:5:140,15,0	1/1:0,3:4:98,12,0
-chr21	16251228	chr21:16251228:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:24,19:44:255,0,255	0/0:31,0:31:0,93,255	0/1:28,24:53:255,0,255
-chr21	16254112	chr21:16254112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:34:255,81,0	1/1:1,37:38:255,94,0	1/1:0,29:30:255,88,0
-chr21	16260029	chr21:16260029:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,22:38:255,0,195	1/1:1,38:41:255,85,0	0/1:33,21:54:242,0,255
-chr21	16261362	chr21:16261362:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,31:45:255,0,226	1/1:0,32:33:255,99,0	0/1:19,18:38:255,0,255
-chr21	16265716	chr21:16265716:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,5:11:178,70,57,57,0,68	0/1:3,9,1:13:127,0,13,111,34,183	1/2:1,5,5:11:174,68,55,56,0,66
-chr21	16273115	chr21:16273115:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:16:0,24,206	0/1:5,3:9:26,0,56	0/1:4,2:8:10,0,64
-chr21	16273814	chr21:16273814:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,17:19:255,255,255,55,20,0	1/2:1,12,8:23:255,98,81,203,0,161	2/2:2,1,23:26:255,255,255,41,58,0
-chr21	16274638	chr21:16274638:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,15:31:255,255,192,232,0,184	2/2:1,3,26:31:255,255,255,55,27,0	1/2:1,24,17:43:255,255,181,255,0,255
-chr21	16284659	chr21:16284659:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<15.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,24,0:30:255,255,255,89,86,0,255,255,89,255	1/2:0,12,11,0:30:255,255,255,255,0,234,255,255,255,255	2/3:0,0,7,4:12:245,240,255,66,121,100,191,174,0,177
-chr21	16286560	chr21:16286560:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:1,36:37:255,91,0	0/1:17,25:42:255,0,194
-chr21	16296053	chr21:16296053:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,1:9:0,6,63	1/1:1,8:13:109,21,0	0/0:2,0:4:0,10,37
-chr21	16314013	chr21:16314013:M	TATATATATATATATATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,3:4:32,8,0	.	1/1:0,1:1:11,3,0
-chr21	16318998	chr21:16318998:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	0/1:8,2:11:4,0,102	0/1:6,4:10:38,0,72
-chr21	16324595	chr21:16324595:M	TATATATATATATAACATAGACATATAATATATATTTAAATAAATTATATAAGTATATATA	<19>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,9:19:255,0,164	0/1:3,1:4:19,0,61	0/1:4,5:10:160,0,89
-chr21	16325630	chr21:16325630:M	TATATATATATATGTATTATATAT	<13>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,21:22:255,62,0	1/1:1,27:30:255,65,0	1/1:1,33:34:255,82,0
-chr21	16325924	chr21:16325924:M	TGTGTGTGCTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:20:255,60,0	1/1:0,20:21:255,63,0	1/1:0,15:19:255,53,0
-chr21	16326942	chr21:16326942:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:111,20,0	1/1:0,4:4:61,12,0	1/1:1,6:8:90,7,0
-chr21	16334137	chr21:16334137:M	TTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,51,0	1/1:0,12:14:255,39,0	1/1:0,14:17:255,44,0
-chr21	16339960	chr21:16339960:M	TATATATATATTTATATAGGTTATATATATATATTTATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,6:30:70,0,255	0/1:12,3:15:33,0,255	0/1:14,5:20:72,0,255
-chr21	16343728	chr21:16343728:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:0,32:33:255,86,0	1/1:3,33:37:255,52,0
-chr21	16349644	chr21:16349644:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47:48:255,142,0	1/1:0,47:49:255,144,0	1/1:0,57:61:255,180,0
-chr21	16351369	chr21:16351369:M	TTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:2,15:20:255,20,0	1/1:2,12:14:183,5,0	1/1:1,6:7:90,2,0
-chr21	16352876	chr21:16352876:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:25:255,73,0	1/1:1,42:44:255,111,0	1/1:0,39:40:255,118,0
-chr21	16353119	chr21:16353119:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,5:6:164,88,71,18,0,0	1/2:0,5,10:16:255,175,132,84,0,38	1/2:0,6,5:12:255,87,52,111,0,79
-chr21	16357494	chr21:16357494:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,21:22:255,65,0	1/1:0,20:20:255,60,0	1/1:0,16:18:255,51,0
-chr21	16365332	chr21:16365332:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:103,18,0	0/1:3,2:6:32,0,32	1/1:0,3:4:39,0,0
-chr21	16368736	chr21:16368736:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:212,35,0	0/1:6,7:17:99,0,57	0/1:2,8:18:124,0,8
-chr21	16369234	chr21:16369234:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:4:85,64,57,12,11,0	1/2:0,2,2:5:113,43,30,33,0,18	1/2:0,4,5:9:239,84,58,67,0,41
-chr21	16373579	chr21:16373579:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:13,14:28:175,0,148	0/0:34,0:34:0,100,255
-chr21	16387373	chr21:16387373:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/1:34,22:59:236,0,255	0/1:23,19:42:223,0,255
-chr21	16389399	chr21:16389399:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:3,34:39:255,51,0	1/1:1,47:50:255,119,0
-chr21	16390562	chr21:16390562:M	TTTTTTTTTTTTTTTTT	<18>,<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/3:2,1,1,3:8:63,45,64,35,47,90,0,3,29,58	1/2:1,4,3,2:12:91,45,54,32,0,103,56,21,72,144	0/2:9,0,9,0:20:204,213,255,0,133,202,222,255,231,255
-chr21	16393300	chr21:16393300:M	TTATTATTATTATTATTATTATTATTAT	<8.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,23:25:255,74,0	1/1:0,16:16:255,47,0	1/1:0,34:35:255,103,0
-chr21	16399731	chr21:16399731:M	TTTTGTTTTTTGTTTTTTGTTTTTTTT	<26>,<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15,0:26:207,0,132,255,206,255	1/2:0,12,12:25:255,255,255,207,0,255	0/2:15,0,15:30:255,255,255,0,255,255
-chr21	16400433	chr21:16400433:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6,1:13:147,0,105,97,72,152	1/2:3,16,4:24:255,8,30,227,0,214	0/2:4,1,6:12:81,71,175,0,60,46
-chr21	16407333	chr21:16407333:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,24:27:255,24,0	1/1:4,25:30:255,18,0	1/1:0,40:42:255,123,0
-chr21	16409823	chr21:16409823:M	TATATATATGTGTGTATATATATATATATATATATATATATATACACACACACATATATATATATACACACATATATATATATATA	<19>,<39>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,4:12:255,126,110,133,0,116	2/2:0,0,0:3:33,35,37,6,6,0	1/1:0,3,0:7:109,12,0,109,12,109
-chr21	16413109	chr21:16413109:M	ATATATATATATATATATATATATATATATATATA	<15.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:8,3,5:17:41,12,167,0,64,52	0/1:1,0,0:4:36,0,10,25,10,28	1/1:0,3,0:9:148,23,0,102,21,85
-chr21	16413143	chr21:16413143:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<24>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,6:7:173,20,0	1/1:0,0:2:16,5,0	1/1:0,1:4:26,3,0
-chr21	16414148	chr21:16414148:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,0:52:0,143,255	0/0:31,1:32:0,76,255	0/1:24,11:36:103,0,255
-chr21	16415006	chr21:16415006:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:14,20:34:252,0,146	0/0:56,0:57:0,167,255
-chr21	16417594	chr21:16417594:M	ATATATATATATATATATATATATATATA	<8.5>,<19.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:7:122,122,122,15,15,0	1/1:0,18,0:19:255,54,0,255,53,255	0/0:0,0,0:1:0,0,0,0,0,0
-chr21	16420341	chr21:16420341:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,22:26:255,22,0	1/1:2,27:29:255,51,0	1/1:0,21:23:255,67,0
-chr21	16427648	chr21:16427648:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:144,18,0	0/0:2,0:6:0,1,63	1/1:0,5:9:177,14,0
-chr21	16429651	chr21:16429651:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:91,9,0	0/0:0,0:2:0,0,0	1/1:0,2:3:77,9,0
-chr21	16431758	chr21:16431758:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:37:0,88,255	0/0:37,2:42:0,88,255	0/1:16,11:30:113,0,213
-chr21	16437303	chr21:16437303:M	AAAAAGACAAAAAAAAAAAAAGAAAAAGAA	<4.8>,<5.2>	.	.	Motif=AAAAAG	GT:AD:DP:PL	1/2:0,14,5:20:255,102,88,255,0,255	0/1:10,17,1:28:255,0,136,255,159,255	1/2:0,14,3:18:255,63,43,255,0,255
-chr21	16440491	chr21:16440491:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:20:0,40,255	0/0:12,0:15:0,38,220	0/1:14,8:23:77,0,201
-chr21	16448675	chr21:16448675:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:27,12:39:164,0,255	1/1:1,21:23:255,42,0	0/0:32,0:33:0,96,255
-chr21	16448713	chr21:16448713:M	TGTGTGTGTGTGTGTATGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,4:5:56,13,0	1/1:0,1:2:21,5,0	0/0:17,1:19:0,30,172
-chr21	16448733	chr21:16448733:M	TATATATATGTGTGTATATATATATGTATATATATATATATA	<22>,<29>,<30>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,3,3:8:189,189,189,36,36,13,36,36,0,13	3/3:0,0,3,5:14:233,228,225,59,52,41,21,14,2,0	1/3:0,7,0,2:11:76,39,28,64,16,210,48,0,199,194
-chr21	16448774	chr21:16448774:M	ACACACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,17,6:26:255,55,8,202,0,180	1/1:2,35,0:38:255,63,0,255,103,255	2/2:2,0,30:32:255,255,255,40,79,0
-chr21	16462413	chr21:16462413:M	CACAGACACACACACACACACACACACACACACACACACACACACACAC	<22.5>,<23.5>,<25.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,18,0:18:255,255,255,53,53,0,255,255,54,255	2/3:0,0,9,6:15:208,225,255,99,160,129,149,149,0,214	1/2:0,7,4,0:16:255,61,29,152,0,116,255,72,152,255
-chr21	16478618	chr21:16478618:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,8:23:75,0,200	0/0:12,2:16:0,2,170	0/1:9,10:25:145,0,97
-chr21	16503580	chr21:16503580:M	AAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:1,15:16:242,30,0	1/1:2,24:26:255,41,0
-chr21	16520902	chr21:16520902:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,9:24:255,161,196,228,0,255	0/1:9,6,0:17:72,0,99,116,123,255	1/2:1,13,7:22:255,102,136,216,0,255
-chr21	16534952	chr21:16534952:M	TTTTTGTTTTTTTTTTTTGTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,114,0	1/1:1,27:31:255,62,0	1/1:0,25:25:255,73,0
-chr21	16544226	chr21:16544226:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:28:226,0,119	0/1:17,21:39:255,0,181	0/1:15,20:37:255,0,170
-chr21	16546314	chr21:16546314:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,2:4:22,0,10	0/1:1,1:2:10,0,10	0/1:1,3:4:38,0,5
-chr21	16555773	chr21:16555773:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:47:255,138,0	1/1:0,42:42:255,123,0	1/1:2,49:51:255,114,0
-chr21	16558539	chr21:16558539:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:34,6,0	1/1:0,3:4:60,11,0	0/1:2,2:5:19,0,29
-chr21	16584313	chr21:16584313:M	ACACACACACACACACACACACACACACACACTCACAAACACAC	<21>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,8:23:78,0,207	0/1:16,11:28:119,0,196	0/1:17,13:31:151,0,214
-chr21	16588407	chr21:16588407:M	TTTTTTCTTTTCTTTCTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,96,255	0/1:17,16:33:160,0,175	0/0:41,0:41:0,119,255
-chr21	16615525	chr21:16615525:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,36:40:255,116,0	1/1:0,27:30:255,85,0
-chr21	16619903	chr21:16619903:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:108,18,0	1/1:1,10:13:153,10,0	1/1:1,16:18:255,33,0
-chr21	16622858	chr21:16622858:M	ACACACACACACACACACACACACACGTGCACACACACACACACA	<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6:21:47,0,212	0/1:6,10:17:123,0,64	1/1:1,14:15:231,26,0
-chr21	16627286	chr21:16627286:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:2,0,3:6:38,44,95,0,34,21	1/2:0,1,2:4:54,28,25,17,0,8	1/2:1,3,4:8:118,41,58,34,0,29
-chr21	16632173	chr21:16632173:M	TTTTTTTTTTTTTTT	<18>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8,0:9:255,24,0,255,13,252	1/2:0,8,3:13:255,79,65,228,0,229	2/2:0,0,4:7:149,136,132,18,8,0
-chr21	16634217	chr21:16634217:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,8:15:102,0,84	0/1:13,11:27:131,0,159	1/1:1,20:24:255,51,0
-chr21	16640784	chr21:16640784:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,25,0:26:255,75,0,255,76,255	1/2:0,4,8:14:255,148,113,71,0,42	1/1:0,27,1:29:255,84,0,255,67,255
-chr21	16653910	chr21:16653910:M	AAAAAAAAAAAAAAAAAAAAA	<16>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,2:13:255,31,14,255,0,255	1/1:0,5,0:6:157,18,0,157,18,157	2/2:1,0,5:6:63,80,150,2,18,0
-chr21	16658293	chr21:16658293:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,6,0:20:255,169,131,255,0,255,255,106,255,255	1/3:0,18,0,16:38:255,255,255,255,255,255,255,0,255,255	2/2:0,0,12,0:15:255,255,255,45,45,0,255,255,44,250
-chr21	16659712	chr21:16659712:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,17:31:228,0,154	0/1:31,17:49:157,0,255	1/1:2,38:41:255,84,0
-chr21	16663247	chr21:16663247:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:32:216,0,175	0/1:15,22:37:255,0,155	0/0:42,1:43:0,108,255
-chr21	16671838	chr21:16671838:M	TATTCTATCCATATTCTATTCT	<2.2>	.	.	Motif=TATTC	GT:AD:DP:PL	0/1:23,27:50:255,0,255	0/1:18,25:43:255,0,255	0/0:28,0:28:0,84,255
-chr21	16673104	chr21:16673104:M	ACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,16:32:255,0,255	0/1:15,7:23:127,0,255	0/0:28,0:29:0,87,255
-chr21	16682666	chr21:16682666:M	TATATATATATATATATATATATAT	<10>,<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,5,14:29:172,90,255,0,0,12	0/0:5,0,0:5:0,15,135,14,76,62	1/2:3,4,6:15:130,45,123,36,0,33
-chr21	16682690	chr21:16682690:M	TTTTTTTTTTT	<10>,<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/3:13,0,0,10:24:247,255,255,252,255,255,0,187,184,255	1/2:3,3,4,0:10:35,21,84,7,0,58,64,102,84,227	3/3:0,0,0,5:8:194,197,202,163,164,150,23,24,18,0
-chr21	16683234	chr21:16683234:M	CTCTCTCTCTCCCTCTGTCTCTCTCTCTCTCTCTC	<16.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:0,29:29:255,85,0	1/1:0,30:30:255,89,0
-chr21	16687644	chr21:16687644:M	AAAGAAAGAAAGAAAGAAA	<5.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:15,10:28:127,0,223	0/1:14,13:30:161,0,190	0/1:10,15:27:206,0,125
-chr21	16687752	chr21:16687752:M	TTTTTTTATTTTTATTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:35:199,0,255	0/1:15,14:29:164,0,182	0/1:20,19:39:235,0,254
-chr21	16689770	chr21:16689770:M	AAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:130,15,0	0/1:1,1:3:27,0,19	.
-chr21	16697281	chr21:16697281:M	ATTATTATTATT	<6>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,42:45:255,126,0	1/1:0,29:33:255,87,0	1/1:0,35:40:255,105,0
-chr21	16704013	chr21:16704013:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,52:52:255,152,0	1/1:0,49:49:255,142,0	1/1:0,55:55:255,160,0
-chr21	16710054	chr21:16710054:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:31:74,0,255	0/1:11,17:31:205,0,131	0/0:37,0:39:0,114,255
-chr21	16711351	chr21:16711351:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:15,0,60	0/1:1,4:6:50,0,9	0/1:5,7:12:85,0,51
-chr21	16714249	chr21:16714249:M	TATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,4:4:122,12,0	1/1:0,9:9:255,27,0
-chr21	16721263	chr21:16721263:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,44:44:255,130,0	1/1:0,39:39:255,115,0
-chr21	16730365	chr21:16730365:M	TTATTATTATTATTATTATTATTATTATTATTAT	<12.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10:10:189,30,0	0/1:5,2:8:12,0,76	0/1:10,7:17:79,0,135
-chr21	16743187	chr21:16743187:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:46:0,135,255	0/1:23,18:44:214,0,255	0/1:27,16:45:166,0,255
-chr21	16743301	chr21:16743301:M	TCTCTCTCTCTCTCTCTCTCTCACTCCCCTTTCTCTCTCTC	<19.5>,<21.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,16,0:17:255,50,0,255,51,255	1/2:0,15,11:27:255,193,234,255,0,255	1/2:0,9,15:24:255,255,255,163,0,186
-chr21	16751556	chr21:16751556:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,8:12:206,119,107,61,0,29	1/2:2,5,7:15:196,66,97,59,0,53	1/2:2,13,9:26:255,98,106,198,0,165
-chr21	16752589	chr21:16752589:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:25,22:47:255,0,255	0/1:20,17:38:206,0,255
-chr21	16755802	chr21:16755802:M	CCAAAAACAAAACAAAACAAAACCAAAAC	<1.5>	.	.	Motif=CCAAAA	GT:AD:DP:PL	0/0:29,1:31:0,65,255	0/1:13,5:19:81,0,255	0/0:34,1:39:0,77,255
-chr21	16764388	chr21:16764388:M	GTGTGTGTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:34:0,102,255	0/1:10,3:16:76,0,222	0/1:13,15:31:255,0,255
-chr21	16764407	chr21:16764407:M	TATATATATATATAATATATATATATGCACATATATATAT	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:7,2:9:9,0,99	0/1:12,11:32:109,0,255
-chr21	16764523	chr21:16764523:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGGTTTTG	<6.2>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/1:12,5:17:41,0,168	0/1:10,5:15:50,0,144
-chr21	16798416	chr21:16798416:M	AAAAAAAAAAAAAAAAAAAAAAAA	<12>,<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,1,4:5:83,94,131,58,69,55,17,17,0,3	0/2:4,0,4,3:11:88,111,252,0,113,90,24,91,24,59	1/2:0,19,2,1:24:255,60,11,255,0,255,255,25,255,255
-chr21	16818070	chr21:16818070:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:20:0,56,255	0/1:7,9:18:210,0,146	0/1:7,13:25:255,0,141
-chr21	16823200	chr21:16823200:M	TTCTCTTCTTTCTTCTTTCTTCTTTCTT	<1.8>	.	.	Motif=TTCT	GT:AD:DP:PL	0/0:35,4:39:0,11,255	0/1:10,12:22:254,0,191	0/1:20,13:33:247,0,255
-chr21	16825838	chr21:16825838:M	TATAGATATAGATAGATAGAGATATAGATATAGATACAGATATATAGATATAGATATA	<8.7>	.	.	Motif=TATAGA	GT:AD:DP:PL	0/1:11,10:21:130,0,149	0/1:8,7:15:82,0,100	0/0:20,0:20:0,59,255
-chr21	16829173	chr21:16829173:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,3:3:88,9,0	1/1:0,4:5:107,4,0
-chr21	16856678	chr21:16856678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:44:0,129,255	0/1:27,16:45:159,0,255	0/0:44,2:47:0,102,255
-chr21	16860273	chr21:16860273:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:2,32:34:255,65,0	1/1:2,41:43:255,90,0
-chr21	16860874	chr21:16860874:M	TTTTCTTTTTTTTTTTTTTTTTT	<22>,<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,8,1,4:17:213,86,82,191,49,255,137,0,216,233	2/3:3,2,6,8:21:204,198,255,64,64,83,16,39,0,85	1/3:2,10,1,6:23:255,120,120,255,79,255,173,0,255,255
-chr21	16866229	chr21:16866229:M	AAAAAAGAAAAAACAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:25:151,0,170	0/1:15,13:28:148,0,183	0/1:11,22:34:255,0,101
-chr21	16879285	chr21:16879285:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:8:224,24,0	1/1:0,24:25:255,72,0	1/1:0,4:5:126,15,0
-chr21	16880537	chr21:16880537:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,18:31:248,0,128	1/1:3,24:30:255,35,0	0/1:13,15:29:193,0,147
-chr21	16907243	chr21:16907243:M	AAAAATTAAAAATAAAAAAAAATAAAAATAAAAA	<5.5>	.	.	Motif=AAAAAT	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,15:15:255,45,0	1/1:0,24:24:255,72,0
-chr21	16907529	chr21:16907529:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:32:0,91,255	0/1:18,10:29:99,0,228	0/0:23,0:25:0,73,255
-chr21	16920035	chr21:16920035:M	TGTGTGTGTGT	<15.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:23,0,9:35:181,225,255,0,255,255	0/0:49,0,0:49:0,147,255,147,255,255	1/2:0,12,8:23:255,229,188,255,0,255
-chr21	16925983	chr21:16925983:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAAA	<42>,<43>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4,0:4:113,12,0,80,12,69	2/2:0,0,1:2:15,16,17,2,3,0	2/2:0,0,6:6:102,102,102,18,18,0
-chr21	16929294	chr21:16929294:M	TGAATGAATGAATGAATGAATGAA	<7>	.	.	Motif=TGAA	GT:AD:DP:PL	0/1:9,14:23:202,0,106	0/0:15,0:15:0,44,255	1/1:0,19:19:255,56,0
-chr21	16930625	chr21:16930625:M	TTTTTTTTTTTTTTGTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,1,16:42:255,255,255,0,255,255	0/0:24,0,0:26:0,75,255,75,255,255	1/2:0,23,16:40:255,255,170,255,0,255
-chr21	16930715	chr21:16930715:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:27:214,0,129	0/0:30,1:33:0,78,255	1/1:3,39:43:255,71,0
-chr21	16931315	chr21:16931315:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:33:0,54,255	0/0:29,2:31:0,59,255	1/1:0,6:8:91,17,0
-chr21	16937042	chr21:16937042:M	ATTTCTATTTCTATTTTTATTT	<3>	.	.	Motif=ATTTCT	GT:AD:DP:PL	0/0:42,2:44:0,83,255	0/1:31,5:36:15,0,255	0/1:13,6:19:86,0,255
-chr21	16941111	chr21:16941111:M	TTGTTTTTTTTTTTTTTTTGCTTTTGTTTTTGTTTTT	<6.3>	.	.	Motif=TTGTTT	GT:AD:DP:PL	0/0:6,1:8:0,4,104	0/0:8,1:11:0,12,148	0/1:7,3:10:27,0,104
-chr21	16941750	chr21:16941750:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:29,2:34:0,64,255	0/1:18,18:37:218,0,219
-chr21	16957263	chr21:16957263:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:46,6:52:0,45,255	0/0:31,0:31:0,91,255	0/1:14,18:33:229,0,150
-chr21	16970937	chr21:16970937:M	ATAATATAATATATTGTACATATTACATACTATAATATATTGTACATATTACATAACATAATATATTGTACATATTACATAATATAATATA	<2.6>	.	.	Motif=ATAAT	GT:AD:DP:PL	1/1:0,3:3:108,9,0	.	1/1:0,1:1:36,3,0
-chr21	16971741	chr21:16971741:M	ACATAACATAA	<1.8>	.	.	Motif=ACATA	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/0:9,0:9:0,27,243	0/1:6,3:9:54,0,135
-chr21	16975449	chr21:16975449:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:231,0,213	1/1:2,18:21:255,26,0	0/1:20,15:36:175,0,255
-chr21	16977305	chr21:16977305:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<18>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,24,0:24:255,72,0,255,71,255	1/1:0,20,1:21:255,63,0,255,44,255	1/2:0,15,12:27:255,220,142,255,0,198
-chr21	16996795	chr21:16996795:M	AGAGAGAGAGATAGAGAGAGAGAGA	<13.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/0:35,0:35:0,103,255	0/1:17,19:36:246,0,209
-chr21	17004191	chr21:17004191:M	TTTTTTTTTTTTTCTTTCTTTCTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:34:255,99,0	0/1:13,9:23:177,0,255	1/1:0,41:43:255,126,0
-chr21	17010741	chr21:17010741:M	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<17.2>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,3:5:70,4,0	0/0:0,0:4:0,2,4	1/1:0,1:3:38,3,0
-chr21	17010817	chr21:17010817:M	GGAGGGAAGGGGAGGGGATGGGAGGGGAGGGAAGGGAAGGG	<7.2>	.	.	Motif=GGAGG	GT:AD:DP:PL	1/1:0,18:19:255,42,0	1/1:0,15:15:253,44,0	0/1:6,10:16:126,0,56
-chr21	17021336	chr21:17021336:M	TCTCTCTCTCTTTCTCTCTCTCTCTCTC	<12>	.	.	Motif=TC	GT:AD:DP:PL	0/0:16,1:18:0,24,255	0/1:16,14:39:255,0,255	0/0:35,0:36:0,108,255
-chr21	17022773	chr21:17022773:M	AATAATAATAATAATAATAATAATAATGATAATAATAATAATAATAAT	<18>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/0:14,0:14:0,42,255	0/1:8,12:21:255,0,168
-chr21	17027733	chr21:17027733:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:155,18,0	1/1:0,6:8:195,23,0	0/1:2,1:5:12,0,65
-chr21	17031911	chr21:17031911:M	GAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAAT	<11.8>,<14.8>	.	.	Motif=GAATA	GT:AD:DP:PL	1/2:0,2,6:10:230,160,149,69,0,51	1/1:0,16,0:16:255,48,0,255,48,255	2/2:0,0,11:11:255,255,255,33,33,0
-chr21	17036135	chr21:17036135:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,2:37:0,72,255	0/0:13,0:16:0,46,255	0/1:12,8:21:78,0,158
-chr21	17040295	chr21:17040295:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,13:15:255,255,253,39,43,0	1/2:0,13,9:24:255,152,96,218,0,155	0/2:4,1,7:16:168,97,206,0,98,96
-chr21	17046109	chr21:17046109:M	ATATTATATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:31,13:44:128,0,255	1/1:0,24:24:255,71,0	0/0:40,0:40:0,118,255
-chr21	17046773	chr21:17046773:M	TCTTTTCTATCTTTTCTTTT	<2.2>	.	.	Motif=TCTTT	GT:AD:DP:PL	0/1:10,30:40:255,0,153	1/1:0,42:42:255,126,0	0/0:21,0:21:0,63,255
-chr21	17046900	chr21:17046900:M	TTTTTCTTTTTCTTTTTTTTTTTTTGTTTTTTTGTTTTTT	<41>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:18,0,125	0/0:17,0:17:0,50,255	0/1:2,5:7:67,0,14
-chr21	17069141	chr21:17069141:M	TATATATATATATATATACACATATATATGTGTGTATATATATATACATATATATATATATATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,13:17:255,2,0	1/1:0,23:27:255,81,0	.
-chr21	17082939	chr21:17082939:M	CACACACACAGACACACGCACACACACAGACACACGCGCACACACACACACAC	<28.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/0:12,0:12:0,36,255	0/1:8,5:15:113,0,180
-chr21	17085170	chr21:17085170:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:5:180,14,0	1/1:0,1:1:28,3,0	1/1:0,0:3:34,8,0
-chr21	17085264	chr21:17085264:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	0/2:4,2,7:15:162,50,116,0,81,99	0/0:2,0,0:4:0,9,55,9,60,71	1/1:0,5,1:7:113,18,0,58,8,49
-chr21	17085319	chr21:17085319:M	TATCTATCTATCTATCTATCTAT	<6.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/0:9,0:9:0,27,174	.	0/1:9,14:23:195,0,101
-chr21	17087610	chr21:17087610:M	GAAGAAAAAGAAGAAGAAAAGAAGAGGAAGAAGAAAAAGGAGGAGGAGGAGGGGAAGGAGAAGAATTATAAGAAGAAAAGAAGAGCAAGAGGAAGAAGAAG	<13>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,9:10:255,27,0	1/1:0,7:10:248,21,0
-chr21	17096524	chr21:17096524:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,20:37:255,0,191	0/1:17,21:39:255,0,187	0/1:26,27:53:255,0,255
-chr21	17100349	chr21:17100349:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<29>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6:10:142,74,145,84,0,67	2/2:0,0,2:2:24,30,59,6,6,0	1/2:0,1,0:3:40,16,13,23,0,18
-chr21	17100380	chr21:17100380:M	AATAATAATAATAATAATAATAATAAT	<8>,<11.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/2:4,0,4:15:104,80,126,0,18,103	0/1:7,0,0:9:4,0,83,29,108,217	1/2:0,13,1:17:220,52,16,204,0,255
-chr21	17112081	chr21:17112081:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,16,0:20:255,255,217,55,1,0,255,228,54,255	2/3:1,1,20,8:30:255,255,255,94,124,56,255,253,0,253	1/2:3,11,13,0:29:255,134,149,112,0,121,255,148,160,255
-chr21	17116180	chr21:17116180:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,10:12:142,0,0	0/1:8,9:19:117,0,80	1/1:2,10:13:139,0,0
-chr21	17116493	chr21:17116493:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,3:12:255,49,16,124,0,94	1/1:0,4,0:4:120,12,0,73,12,62	2/2:0,0,0:4:0,0,0,0,0,0
-chr21	17118409	chr21:17118409:M	AAAAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,3,28:32:255,255,255,95,40,0	0/2:6,1,8:15:194,117,254,0,145,136	1/2:0,21,18:41:255,255,195,255,0,255
-chr21	17120247	chr21:17120247:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,20:35:255,0,169	0/0:25,2:28:0,46,255	0/1:19,17:36:205,0,241
-chr21	17127850	chr21:17127850:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:40:255,118,0	0/1:21,15:37:167,0,255	1/1:3,49:55:255,104,0
-chr21	17130693	chr21:17130693:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,55:55:255,163,0	0/1:32,20:52:212,0,255	1/1:0,58:58:255,171,0
-chr21	17135247	chr21:17135247:M	AAAAAAAGAAAGAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	0/1:16,9:25:87,0,210	1/1:0,36:37:255,109,0
-chr21	17138814	chr21:17138814:M	GAAGGAAGGAAGGAAGGAAGGAAG	<10>,<11>,<12>	.	.	Motif=GAAG	GT:AD:DP:PL	1/2:0,6,6,0:12:255,114,80,114,0,80,255,98,114,255	0/1:21,9,0,0:30:179,0,255,161,255,255,238,255,255,255	2/3:0,0,8,11:19:255,255,255,204,203,150,149,127,0,94
-chr21	17138835	chr21:17138835:M	AAGCAAGAAAGCAAGC	<3>	.	.	Motif=AAGC	GT:AD:DP:PL	1/1:0,26:26:255,76,0	0/1:21,20:41:198,0,215	1/1:0,34:34:255,99,0
-chr21	17143208	chr21:17143208:M	GTGTGTGTGTGTGTGTGTGT	<12>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,14:30:255,0,255	0/0:39,0:40:0,120,255	0/1:15,13:30:255,0,255
-chr21	17144737	chr21:17144737:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:45:0,132,255	0/0:29,0:31:0,90,255	0/1:27,19:46:213,0,255
-chr21	17145268	chr21:17145268:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:31:255,72,0	0/1:15,10:27:105,0,192	1/1:0,31:31:255,91,0
-chr21	17146907	chr21:17146907:M	TGTTTTTTGTTTGTTTTTTTG	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,17:18:174,45,0	0/1:14,5:19:1,0,94	1/1:0,20:21:205,52,0
-chr21	17146930	chr21:17146930:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:10:222,21,0	0/0:4,0:5:0,12,127	1/1:0,5:6:185,10,0
-chr21	17168174	chr21:17168174:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:41:244,0,255	0/1:19,15:34:170,0,242	0/1:26,12:39:109,0,255
-chr21	17170900	chr21:17170900:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,3:34:0,45,255	0/0:36,4:40:0,47,255	0/1:23,31:59:255,0,254
-chr21	17174288	chr21:17174288:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:81,0,12	0/0:5,0:6:0,17,93	0/1:3,4:10:57,0,32
-chr21	17175314	chr21:17175314:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:44:0,111,255	0/0:42,1:44:0,111,255	0/1:28,20:50:228,0,255
-chr21	17176332	chr21:17176332:M	AAAAAAAAAAAAAAAAAGAAAAA	<17>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,15:19:216,255,255,0,72,16	0/2:3,0,14:17:190,237,255,0,52,2	1/1:2,20,0:24:255,9,0,255,37,255
-chr21	17178914	chr21:17178914:M	AAAAAAAAAAAAAAAAAAA	<13>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,13,11:25:255,255,255,201,202,131,227,226,0,154	0/2:8,0,11,0:23:255,255,255,0,253,220,193,255,254,255	1/3:0,20,0,8:29:255,249,190,255,146,255,255,0,255,255
-chr21	17186567	chr21:17186567:M	AAAAAAAAAAGAAAAAAGAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:28:248,0,255	1/1:0,22:25:255,66,0	0/1:17,15:32:255,0,255
-chr21	17197324	chr21:17197324:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:37:0,71,255	0/0:40,1:42:0,105,255	0/1:30,20:50:218,0,255
-chr21	17199969	chr21:17199969:M	ACACACACAGACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,17:36:255,0,255	0/0:33,0:33:0,99,255	1/1:2,28:32:255,43,0
-chr21	17224632	chr21:17224632:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<16.5>,<19.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4,0:5:122,12,0,121,11,120	1/1:0,3,0:3:92,9,0,92,9,92	2/2:0,0,3:4:91,91,91,10,10,0
-chr21	17235566	chr21:17235566:M	AAAAAATAAAAAAAAAAAAAGAAAGAAAAGAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,81,255	0/0:29,0:29:0,87,255	0/1:10,9:21:179,0,208
-chr21	17237590	chr21:17237590:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:47,2:51:0,114,255	0/1:20,17:39:209,0,255
-chr21	17254117	chr21:17254117:M	AAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:9:42,0,129	0/1:0,1:2:23,0,6	0/1:2,3:6:76,0,41
-chr21	17254229	chr21:17254229:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,2:44:0,91,255	0/1:16,16:32:197,0,195	0/1:19,28:47:255,0,218
-chr21	17262071	chr21:17262071:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20:37:255,0,179	0/1:15,15:31:181,0,174	0/0:37,0:38:0,111,255
-chr21	17266847	chr21:17266847:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,88,0	0/1:15,13:28:145,0,180	1/1:1,33:35:255,82,0
-chr21	17278372	chr21:17278372:M	AAAAAAAAAAAGAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,98,0	0/1:20,22:43:255,0,231	1/1:0,50:50:255,147,0
-chr21	17279810	chr21:17279810:M	GGGGGGGGGGGGG	<10>,<11>,<12>	.	.	Motif=G	GT:AD:DP:PL	1/3:0,9,0,7:16:255,107,135,229,106,203,227,0,139,199	3/3:0,0,0,4:5:49,63,109,52,74,63,3,13,12,0	1/2:0,9,5,0:14:255,77,37,140,0,99,255,64,138,255
-chr21	17283477	chr21:17283477:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:145,16,0	0/1:7,12:24:129,0,82	1/1:2,11:16:153,3,0
-chr21	17284947	chr21:17284947:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,45:45:255,131,0	0/1:12,22:34:248,0,91	1/1:0,35:35:255,102,0
-chr21	17289553	chr21:17289553:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,11:16:149,0,34	0/0:10,2:13:0,4,144	0/1:10,10:26:146,0,109
-chr21	17291500	chr21:17291500:M	TTTTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,12:24:255,218,255,254,0,212	0/1:6,14,0:21:255,0,115,255,102,255	1/2:2,14,8:27:255,110,182,255,0,255
-chr21	17305413	chr21:17305413:M	TTTTTATTTTTTTATTTTTTTTTTTTAATTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,11:22:255,199,137,200,0,137	0/2:8,0,9:17:210,154,255,0,209,183	1/2:0,4,8:12:255,141,108,71,0,37
-chr21	17308259	chr21:17308259:M	AAAAAAAAAAAAAACAAAAAAAAACAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:7,17:25:255,0,136	1/1:0,30:33:255,98,0
-chr21	17317336	chr21:17317336:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,4:10:178,68,67,54,0,34	0/2:3,0,3:7:64,51,130,0,80,66	1/2:0,10,3:16:255,51,15,181,0,144
-chr21	17321418	chr21:17321418:M	AAAAAATAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,10:22:111,0,127	0/1:25,5:31:2,0,255	0/1:6,15:24:205,0,34
-chr21	17326063	chr21:17326063:M	ACACACACACACACACACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,13:15:255,44,0	1/1:0,14:17:255,50,0	1/1:0,19:20:255,60,0
-chr21	17333813	chr21:17333813:M	TATATATATATATATATATAGTATATATATAGTATA	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,38:38:255,112,0	0/1:2,2:4:24,0,24	1/1:0,16:17:255,50,0
-chr21	17335836	chr21:17335836:M	TTTTTCTTTTCTTTTTCTCTTTCTTTTTTTTTTTTTTTTTTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:112,12,0	.	1/1:0,2:4:69,9,0
-chr21	17336845	chr21:17336845:M	AAATAAATAAATAAATAAATAAA	<6.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,20:41:137,0,79	0/0:18,0:25:0,58,238	0/1:10,5:22:9,0,96
-chr21	17337857	chr21:17337857:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:6,14:23:255,0,122	0/1:19,8:33:140,0,255	0/1:15,8:27:173,0,255
-chr21	17349582	chr21:17349582:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,22:39:255,0,255	0/1:10,14:28:255,0,199	0/1:22,10:37:180,0,255
-chr21	17352726	chr21:17352726:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,15:21:255,0,21	0/1:3,11:18:255,0,41	0/1:5,16:23:255,0,82
-chr21	17354984	chr21:17354984:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,29:45:255,0,157	0/1:13,13:27:161,0,151	0/1:16,26:45:255,0,170
-chr21	17357071	chr21:17357071:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:26,15:41:75,0,215	0/1:20,14:34:79,0,153	0/1:20,21:41:149,0,137
-chr21	17358528	chr21:17358528:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTATGTGTGCGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,19:35:253,0,186	0/1:8,12:20:154,0,83	0/1:11,9:20:105,0,142
-chr21	17361803	chr21:17361803:M	AAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:21:255,0,125	0/0:12,0:17:0,50,255	0/1:2,10:14:255,0,35
-chr21	17362108	chr21:17362108:M	AAAAAAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,13,7:25:255,70,164,255,0,255	2/2:2,0,20:24:255,255,255,26,68,0	1/2:1,21,7:34:255,110,124,255,0,255
-chr21	17362535	chr21:17362535:M	AAAATTAAAATT	<1.8>	.	.	Motif=AAAATT	GT:AD:DP:PL	0/1:19,19:39:255,0,255	1/1:0,32:32:255,96,0	0/1:14,21:35:255,0,214
-chr21	17364310	chr21:17364310:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<11>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,8,7:15:246,133,161,151,0,189	0/2:3,0,6:9:83,108,203,0,46,28	1/2:0,13,9:22:255,165,193,240,0,255
-chr21	17367127	chr21:17367127:M	AAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,3:6:65,52,89,0,52,69	0/1:1,5,1:8:71,0,4,54,7,83	0/1:2,2,0:7:18,0,40,20,43,85
-chr21	17367301	chr21:17367301:M	AAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2,0:4:65,7,0,42,6,36	2/2:0,1,7:8:236,125,102,24,6,0	1/2:0,3,1:7:143,27,9,71,0,56
-chr21	17369908	chr21:17369908:M	ATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,9:25:154,0,183	0/0:16,0:16:0,48,255	0/1:21,13:41:199,0,255
-chr21	17369929	chr21:17369929:M	TATATATATATA	<7>,<8>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,1,3:4:78,38,27,11,0,2	1/1:1,5,0:6:50,4,0,53,17,74	0/2:26,0,4:30:11,44,255,0,255,255
-chr21	17369969	chr21:17369969:M	TATATATATATATACATGTATATATATATATAT	<4.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,12:15:255,0,32	1/1:0,10:12:255,36,0	0/1:22,7:29:248,0,255
-chr21	17371646	chr21:17371646:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,11:31:255,171,111,255,0,255	1/1:0,30,0:31:255,93,0,255,91,255	0/2:18,2,8:28:82,86,255,0,255,242
-chr21	17372825	chr21:17372825:M	AAGAAGAAGAAGAAGAAGAAGAAG	<7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,40:41:255,119,0	0/1:15,23:38:255,0,170
-chr21	17375206	chr21:17375206:M	AGAGACAGAGACA	<1.8>	.	.	Motif=AGAGAC	GT:AD:DP:PL	0/1:21,6:27:87,0,255	1/1:0,37:37:255,111,0	0/0:47,0:47:0,141,255
-chr21	17381934	chr21:17381934:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>,<8.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,16,0,7:23:255,127,150,255,193,255,255,0,255,255	1/1:0,14,0,0:14:255,42,0,255,41,243,255,42,255,255	2/3:0,0,12,7:19:255,255,255,123,196,156,212,212,0,255
-chr21	17384220	chr21:17384220:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:143,18,0	.	0/1:14,17:33:255,0,255
-chr21	17384974	chr21:17384974:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,21,26:48:255,255,255,255,0,255	2/2:1,0,37:38:255,255,255,94,111,0	1/1:3,36,0:39:255,59,0,255,108,255
-chr21	17387683	chr21:17387683:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23,0:41:255,0,255,255,255,255	1/2:1,14,12:28:255,191,141,214,0,165	0/0:48,0,0:50:0,150,255,150,255,255
-chr21	17387964	chr21:17387964:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,14:42:146,0,255	0/0:25,0:27:0,78,255	0/1:19,13:33:139,0,255
-chr21	17391508	chr21:17391508:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,12:16:161,0,22	0/1:5,9:15:106,0,48	0/1:17,9:26:77,0,213
-chr21	17401499	chr21:17401499:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:22:93,0,160	1/1:1,35:41:255,89,0	0/0:27,2:30:0,51,255
-chr21	17407281	chr21:17407281:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,44:44:255,129,0	1/1:0,47:47:255,138,0
-chr21	17411233	chr21:17411233:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:16:0,47,255	0/1:5,8:13:98,0,47	0/0:15,1:17:0,32,255
-chr21	17422621	chr21:17422621:M	TTTGTTTGTTTGTTGTTTGTTGTTTTTTTTTTGT	<8.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:2,32:35:255,57,0	1/1:0,20:20:255,60,0
-chr21	17422802	chr21:17422802:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,12,0:35:125,0,255,194,255,255	1/2:0,13,8:21:255,141,81,195,0,171	0/0:33,1,0:35:0,84,255,102,255,255
-chr21	17423415	chr21:17423415:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:29:255,66,0	1/1:2,24:26:255,41,0	1/1:3,32:35:255,49,0
-chr21	17423597	chr21:17423597:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,5:16:42,0,148	0/0:18,0:18:0,53,255	0/1:18,4:23:3,0,254
-chr21	17425955	chr21:17425955:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,35:37:255,72,0	1/1:1,35:37:255,91,0	1/1:1,47:48:255,123,0
-chr21	17426908	chr21:17426908:M	AATAAATAAATAAATAAATAAATAAATAAATAA	<10.2>,<11.2>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,7,9:16:255,173,128,134,0,89	1/1:0,16,0:16:255,48,0,255,47,255	2/2:0,0,21:21:255,255,255,63,62,0
-chr21	17428199	chr21:17428199:M	TTTTTCTTTTTTTTTCTTTTTTTTT	<26>,<27>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,2:4:79,35,24,30,0,24	0/1:2,4,0:7:47,0,24,56,42,117	1/2:0,4,5:9:181,85,61,58,0,43
-chr21	17428635	chr21:17428635:M	AGTGCAGTGGAGTGCAGTGGAGTGCAGTGGAGTGCAGTGAAGTG	<6.8>	.	.	Motif=AGTGC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,26:26:255,78,0	1/1:0,32:32:255,96,0
-chr21	17429806	chr21:17429806:M	AAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,19:29:255,255,255,105,0,71	1/1:0,19,0:19:255,57,0,255,56,255	2/2:0,0,37:37:255,255,255,111,109,0
-chr21	17432731	chr21:17432731:M	GAAGGAAGGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGAAGG	<10.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:1,2:6:52,0,11	0/1:1,3:4:61,0,13	0/0:12,1:15:0,18,255
-chr21	17433559	chr21:17433559:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,43,0:43:255,129,0,255,127,255	1/1:0,34,0:36:255,108,0,255,105,255	1/2:0,17,13:30:255,200,149,255,0,222
-chr21	17434908	chr21:17434908:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAA	<41>,<42>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,10:13:255,187,153,38,2,0	2/2:0,0,9:10:255,178,154,26,26,0	1/2:0,7,6:13:255,105,67,123,0,85
-chr21	17436178	chr21:17436178:M	GGAAGGAAGGAAGGAAGGAAGGAAGG	<4.5>,<5.5>	.	.	Motif=GGAA	GT:AD:DP:PL	2/2:2,0,5:8:37,30,60,0,11,0	1/2:0,1,5:7:67,38,32,19,0,1	0/1:1,3,0:5:60,0,5,37,8,35
-chr21	17436201	chr21:17436201:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGAGAGG	<8>,<13>	.	.	Motif=AGGG	GT:AD:DP:PL	1/2:0,0,2:3:53,46,46,9,0,5	1/1:0,3,0:3:90,9,0,90,9,90	2/2:0,0,3:3:75,78,81,9,9,0
-chr21	17439342	chr21:17439342:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,11:28:255,207,128,255,0,243	1/1:1,32,1:34:255,82,0,255,82,255	0/2:26,0,22:48:255,255,255,0,255,255
-chr21	17440352	chr21:17440352:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,35:37:255,108,0	0/1:20,16:37:255,0,255
-chr21	17441929	chr21:17441929:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,24:26:255,48,0	1/1:2,26:30:255,52,0	0/1:28,14:45:153,0,255
-chr21	17443967	chr21:17443967:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTG	<21>,<27>,<28>,<29>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,7,3,7:18:255,255,255,202,203,168,178,198,79,149,126,199,0,75,162	3/4:0,0,0,4,6:10:255,255,255,223,224,207,98,98,97,69,65,66,54,0,36	1/2:1,11,2,0,0:17:255,6,34,255,0,255,255,45,255,255,255,68,255,255,255
-chr21	17454010	chr21:17454010:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,3,0,3:7:168,81,70,106,53,89,84,0,53,73	1/2:0,0,3,0:4:97,51,40,11,0,1,63,42,11,54	1/3:0,1,1,2:4:93,54,48,37,20,26,30,0,3,21
-chr21	17456517	chr21:17456517:M	AAAAAAAAAAAGAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,18,18:39:255,255,233,248,0,243	0/2:19,0,13:34:255,224,255,0,255,255	1/2:0,16,9:26:255,170,99,246,0,216
-chr21	17456963	chr21:17456963:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,24:24:255,71,0	1/1:1,35:36:255,88,0
-chr21	17457248	chr21:17457248:M	TTTTTTGTTTTTTGGTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,56,0	1/1:0,21:21:255,62,0	1/1:0,26:26:255,76,0
-chr21	17461784	chr21:17461784:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,7:8:212,124,102,24,6,0	1/2:1,1,5:9:144,54,59,10,0,16	1/2:0,3,5:10:204,83,68,48,0,24
-chr21	17462831	chr21:17462831:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,34:34:255,100,0	1/1:0,38:39:255,114,0
-chr21	17463131	chr21:17463131:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,6,0:8:159,0,5,112,17,111	1/2:1,3,5:11:135,53,67,43,0,33	1/2:3,8,5:18:228,22,66,101,0,107
-chr21	17464192	chr21:17464192:M	TTTTTTTGTTTTTGTTTTGTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:16:82,0,119	0/0:27,0:29:0,84,255	0/1:9,12:23:158,0,104
-chr21	17465277	chr21:17465277:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,19:38:243,0,243	0/0:25,1:27:0,51,255	0/1:12,20:32:255,0,124
-chr21	17466224	chr21:17466224:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,14:38:164,0,255	0/0:55,0:55:0,162,255	0/1:21,15:36:180,0,255
-chr21	17468375	chr21:17468375:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:71,12,0	0/1:3,8:13:115,0,15	1/1:1,6:10:119,9,0
-chr21	17470402	chr21:17470402:M	TTTTTTTTTTTTTTTTTTTTGTCTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:11:255,32,0	1/1:0,6:6:167,18,0	1/1:0,9:9:245,27,0
-chr21	17471023	chr21:17471023:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:1,17:20:255,41,0	1/1:2,12:15:179,9,0
-chr21	17476109	chr21:17476109:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,10:23:120,185,255,0,206,176	1/2:1,15,10:29:255,166,219,255,0,255	0/0:29,0,0:29:0,85,255,85,255,255
-chr21	17477581	chr21:17477581:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:25:138,0,151	0/0:13,1:18:0,34,252	0/1:18,4:22:7,0,255
-chr21	17478343	chr21:17478343:M	TTATTTATTTATTTAATTAATTAATTAATTTATTTATTTATTTATTT	<12.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:18,0:18:0,53,255	0/1:9,3:12:21,0,134
-chr21	17482556	chr21:17482556:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<11.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:6,7,0:14:105,0,75,142,99,255	0/1:4,4,0:8:49,0,49,71,61,162	0/2:4,0,3:7:36,55,141,0,64,55
-chr21	17484141	chr21:17484141:M	ATATATATATATATATATTTATATATATAT	<10>,<10.5>,<11>,<12>,<17>	.	.	Motif=AT	GT:AD:DP:PL	1/5:0,4,0,0,0,5:11:214,105,126,131,136,153,168,140,164,191,213,141,167,203,241,106,0,26,62,107,102	2/4:0,0,3,0,7,1:12:249,163,159,106,116,95,90,97,81,78,37,14,0,13,24,228,139,82,66,13,226	1/3:0,8,0,8,0,0:17:255,110,60,88,27,37,121,0,35,72,255,87,84,118,255,255,110,88,121,255,255
-chr21	17485034	chr21:17485034:M	TTTGTTTTTGTTTTTTTTTGTTTTGTTTTGTTTT	<6.6>	.	.	Motif=TTTGT	GT:AD:DP:PL	0/1:17,9:26:130,0,255	0/1:11,10:21:166,0,181	1/1:0,23:23:255,69,0
-chr21	17485435	chr21:17485435:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,22:39:255,0,185	0/1:14,18:32:225,0,155	0/0:43,1:46:0,117,255
-chr21	17486649	chr21:17486649:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:13:70,0,70	0/0:5,1:6:0,1,68	0/1:6,10:17:125,0,65
-chr21	17487433	chr21:17487433:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,1,15,5:21:255,255,255,76,71,28,255,206,0,217	1/2:0,5,21,0:26:255,255,255,86,0,9,255,255,84,255	1/3:0,9,1,10:22:255,175,233,255,157,255,255,0,149,218
-chr21	17487622	chr21:17487622:M	ACACACACACATACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:31:255,92,0	0/1:20,17:37:201,0,254	0/1:16,16:32:207,0,207
-chr21	17490960	chr21:17490960:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,5:13:251,90,53,123,0,108	1/1:2,10,1:13:150,3,0,130,20,178	1/2:0,2,8:11:225,134,113,23,0,7
-chr21	17500028	chr21:17500028:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:1,18:22:255,44,0	1/1:0,16:18:255,52,0
-chr21	17502090	chr21:17502090:M	TTTTCTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:10,3,0	0/1:1,3:5:45,0,2	1/1:0,0:2:20,5,0
-chr21	17504104	chr21:17504104:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:9,0,168	0/0:3,0:4:0,11,61	0/1:7,3:12:17,0,108
-chr21	17504994	chr21:17504994:M	AAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,7:10:251,118,90,51,0,22	2/2:0,2,13:17:255,246,203,50,16,0	2/2:0,2,14:16:255,246,202,47,13,0
-chr21	17505810	chr21:17505810:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:27:153,0,162	0/1:15,14:31:156,0,182	0/0:33,2:36:0,62,255
-chr21	17506009	chr21:17506009:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,42:42:255,123,0	1/1:0,43:45:255,132,0
-chr21	17507648	chr21:17507648:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:31:255,86,0	1/1:0,8:10:213,27,0	0/1:1,4:5:86,0,10
-chr21	17508972	chr21:17508972:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:73,7,0	1/1:0,3:4:37,0,0	0/1:0,2:3:24,0,2
-chr21	17511372	chr21:17511372:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,27:29:255,255,255,85,49,0	1/2:0,17,14:31:255,204,152,255,0,206	1/2:1,23,19:44:255,255,226,255,0,255
-chr21	17514566	chr21:17514566:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:0,41:41:255,120,0	1/1:2,52:55:255,125,0
-chr21	17514638	chr21:17514638:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,2:37:0,64,255	0/0:29,2:31:0,56,255	0/1:23,16:42:175,0,255
-chr21	17514974	chr21:17514974:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,19:48:216,0,255	0/0:44,1:46:0,117,255	0/0:47,0:47:0,139,255
-chr21	17524029	chr21:17524029:M	TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/0:9,0:11:0,32,182	0/1:10,11:22:141,0,122
-chr21	17529035	chr21:17529035:M	TTTTTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,9,94	0/0:3,0:4:0,12,125	1/1:1,13:14:255,11,0
-chr21	17530115	chr21:17530115:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9,0:9:156,26,0,156,26,156	1/1:0,4,0:4:66,12,0,66,12,66	1/2:1,2,5:8:131,67,62,12,0,22
-chr21	17531299	chr21:17531299:M	AAAAAAAAAAAAAGAAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,88,255	0/0:22,0:23:0,57,255	0/1:7,9:19:126,0,80
-chr21	17531938	chr21:17531938:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:26:0,64,255	0/1:11,18:31:199,0,72	0/0:36,2:43:0,88,255
-chr21	17534790	chr21:17534790:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6:18:58,0,142	1/1:2,18:21:255,27,0	0/1:12,7:22:69,0,166
-chr21	17541618	chr21:17541618:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,8,3:16:189,0,104,98,43,146	2/2:1,1,23:25:255,255,255,56,55,0	0/2:15,3,16:34:223,190,255,0,213,172
-chr21	17545773	chr21:17545773:M	TTTTTTTTGTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:129,0,147	1/1:2,30:32:255,59,0	0/1:15,21:38:255,0,152
-chr21	17550352	chr21:17550352:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,2:14:9,0,255	0/1:2,11:14:246,0,12	0/1:6,4:10:76,0,132
-chr21	17553615	chr21:17553615:M	TTTTTTTTTTTTTTTTTTTCTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,10:15:138,0,37	1/1:0,9:10:165,29,0	0/1:4,7:13:95,0,51
-chr21	17558082	chr21:17558082:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,17:33:255,0,255	1/1:0,46:47:255,138,0	0/1:15,27:43:255,0,255
-chr21	17559670	chr21:17559670:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:8:101,0,10	1/1:0,7:8:188,21,0	1/1:1,8:11:200,1,0
-chr21	17559972	chr21:17559972:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:34:255,0,185	1/1:0,41:43:255,126,0	0/1:22,16:40:199,0,255
-chr21	17565283	chr21:17565283:M	ACACACACACACACACACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,27:43:255,0,255	1/1:0,37:39:255,117,0	0/1:13,22:35:255,0,255
-chr21	17566947	chr21:17566947:M	AAAAAAAAAAAAGAAAGAAAAAGAAAAAAA	<29>,<31>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,9,16:28:255,255,255,152,0,180	2/2:1,0,23:24:255,255,255,53,69,0	1/2:4,14,16:37:255,228,255,194,0,255
-chr21	17567863	chr21:17567863:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:44:244,0,255	1/1:1,27:28:255,65,0	0/1:13,18:31:236,0,145
-chr21	17568126	chr21:17568126:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:9:108,8,0	0/1:2,4:6:49,0,16	0/1:3,4:8:57,0,28
-chr21	17568558	chr21:17568558:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,16,5:24:255,42,76,240,0,255	1/1:3,29,0:35:255,48,0,255,93,255	1/2:2,17,9:28:255,125,172,255,0,255
-chr21	17569360	chr21:17569360:M	TATATATTATATATATATATGTACATATAT	<16>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,16:33:210,0,228	0/0:16,0:17:0,47,255	0/1:12,14:26:185,0,148
-chr21	17572208	chr21:17572208:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,54,0	1/1:1,9:13:230,2,0	1/1:1,21:23:255,37,0
-chr21	17574999	chr21:17574999:M	ACATACATACATACATACATACATACATACATACATACATACATACATACATA	<10.8>,<12.2>	.	.	Motif=ACAT	GT:AD:DP:PL	1/2:0,11,9:20:255,171,244,255,0,255	1/1:0,23,0:25:255,75,0,255,74,255	1/2:0,17,16:33:255,255,255,255,0,255
-chr21	17575493	chr21:17575493:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,14:24:255,0,203	1/1:0,15:16:255,48,0	0/1:19,13:34:248,0,255
-chr21	17576088	chr21:17576088:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,7:15:77,0,86	0/1:11,9:21:87,0,130	0/1:13,8:21:74,0,159
-chr21	17579885	chr21:17579885:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/0:45,1:49:0,125,255	0/1:20,30:51:255,0,216
-chr21	17581848	chr21:17581848:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:212,35,0	1/1:0,7:7:123,21,0	1/1:0,6:7:117,20,0
-chr21	17581921	chr21:17581921:M	GTTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTTGTTT	<9>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,38:38:255,113,0	1/1:0,36:36:255,107,0
-chr21	17586383	chr21:17586383:M	TATATATATATATAATGTGTATATATATATATAATATATATTATATATGTATA	<27.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:1,0:1:0,3,18	0/1:5,7:12:96,0,57
-chr21	17589583	chr21:17589583:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/0:35,1:36:0,88,255	0/1:13,25:39:255,0,138
-chr21	17590229	chr21:17590229:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:31:255,54,0	1/1:2,26:29:255,50,0	1/1:3,27:31:255,37,0
-chr21	17599476	chr21:17599476:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,155	0/0:5,0:6:0,17,95	0/1:3,5:11:68,0,34
-chr21	17608374	chr21:17608374:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:43:0,107,255	0/0:26,0:26:0,76,255	0/1:17,15:32:180,0,215
-chr21	17614103	chr21:17614103:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,39:42:255,86,0	1/1:1,37:39:255,96,0	1/1:2,40:43:255,81,0
-chr21	17616336	chr21:17616336:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7:15:83,0,81	0/1:5,8:14:99,0,47	1/1:0,11:11:193,32,0
-chr21	17625226	chr21:17625226:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,1:48:0,123,255	0/0:47,0:48:0,141,255	0/1:25,20:46:243,0,255
-chr21	17630651	chr21:17630651:M	TTTTTTTTTTTTTTTTTT	<19>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,10,5:18:197,79,84,113,0,255	1/2:3,4,4:11:91,52,76,15,0,124	1/2:2,7,4:18:151,73,86,65,0,183
-chr21	17670334	chr21:17670334:M	TCTCTCTCTCTCTCTCTCTCTC	<10>	.	.	Motif=TC	GT:AD:DP:PL	0/1:13,20:36:255,0,152	0/1:14,21:35:255,0,149	0/0:36,1:37:0,90,255
-chr21	17673720	chr21:17673720:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:163,29,0	1/1:0,8:8:129,23,0	0/0:0,0:1:0,1,3
-chr21	17680037	chr21:17680037:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:14:3,0,142	0/0:10,0:12:0,34,183	0/1:5,4:11:45,0,63
-chr21	17680619	chr21:17680619:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,5:10:103,0,81	0/1:2,4:6:88,0,32	0/0:16,0:16:0,48,255
-chr21	17683821	chr21:17683821:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,7:27:255,83,112,255,0,255	0/1:13,6,0:21:138,0,255,161,172,255	0/2:3,0,6:10:64,81,207,0,39,13
-chr21	17685280	chr21:17685280:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTT	<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:19,18:37:255,0,255	0/1:15,9:26:163,0,255	0/0:46,0:48:0,144,255
-chr21	17692266	chr21:17692266:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,17:45:188,0,255	0/1:18,14:35:152,0,246	0/0:26,2:28:0,46,255
-chr21	17693272	chr21:17693272:M	TTTTTTCTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,11:16:154,0,44	0/1:7,8:16:102,0,75	0/0:22,0:23:0,67,255
-chr21	17693618	chr21:17693618:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:36:161,0,255	0/1:22,18:40:205,0,255	0/0:34,0:34:0,100,255
-chr21	17695717	chr21:17695717:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<5.2>,<11.2>	.	.	Motif=TTAT	GT:AD:DP:PL	1/2:0,19,10:29:255,193,225,255,0,255	0/1:8,20,0:28:255,0,155,255,144,255	0/2:10,0,7:17:83,132,255,0,187,139
-chr21	17698568	chr21:17698568:M	AAAAAAAAAAAGAAAAAAAAAAAAAAA	<19>,<26>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,5,11:25:252,139,255,120,0,109	0/1:6,5,0:16:113,0,149,136,103,221	0/2:7,0,8:21:72,126,255,0,133,83
-chr21	17703520	chr21:17703520:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGT	<22>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,10:21:255,148,115,191,0,133	1/2:0,12,7:19:255,99,63,198,0,146	2/2:0,1,15:16:255,246,243,47,30,0
-chr21	17711021	chr21:17711021:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,13:20:191,0,52	0/1:15,21:36:255,0,156	0/0:27,0:27:0,79,255
-chr21	17718102	chr21:17718102:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:16:139,0,194	0/1:2,7:12:168,0,18	0/0:9,0:11:0,30,253
-chr21	17722214	chr21:17722214:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:8,4:15:41,0,100	0/1:14,4:20:10,0,201
-chr21	17722924	chr21:17722924:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,20:36:255,0,190	0/1:14,23:38:255,0,134	0/0:31,1:33:0,79,255
-chr21	17723595	chr21:17723595:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:27:139,0,177	0/1:13,15:30:172,0,157	0/0:40,1:43:0,105,255
-chr21	17731757	chr21:17731757:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<12.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:2,13:15:216,6,0	0/1:4,2:6:19,0,55	0/1:12,5:17:45,0,175
-chr21	17737310	chr21:17737310:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:38,0,15	0/1:1,1:3:21,0,8	0/1:1,0:2:7,0,11
-chr21	17744946	chr21:17744946:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:6:0,14,80	0/0:15,0:17:0,49,255	0/1:7,3:11:19,0,99
-chr21	17745481	chr21:17745481:M	TTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,6:6:174,18,0	0/0:5,0:6:0,18,147
-chr21	17755233	chr21:17755233:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,3,14:19:255,255,229,48,1,0	2/2:0,0,9:10:255,193,167,30,29,0	1/2:3,6,5:15:177,29,49,29,0,100
-chr21	17756642	chr21:17756642:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:24:255,66,0	1/1:0,13:15:255,42,0	0/1:5,16:21:255,0,71
-chr21	17764534	chr21:17764534:M	ACACACACACACACACACACTCACACACACAC	<17>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,12:32:135,0,255	1/1:1,34:35:255,85,0	0/0:30,0:30:0,89,255
-chr21	17767776	chr21:17767776:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:38:255,0,169	1/1:0,43:43:255,126,0	0/0:34,0:36:0,105,255
-chr21	17786301	chr21:17786301:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:1,4:5:41,0,0	0/1:2,4:8:46,0,8
-chr21	17788586	chr21:17788586:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,35:37:255,72,0	1/1:0,26:26:255,76,0	1/1:3,35:39:255,60,0
-chr21	17789254	chr21:17789254:M	CACACACACACACACACACACACACACACACACA	<12>,<16>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,40,0:40:255,120,0,255,120,255	1/1:0,25,0:25:255,75,0,255,75,255	1/2:0,18,7:25:255,124,131,255,0,255
-chr21	17795005	chr21:17795005:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:18:255,35,0	1/1:1,13:14:202,24,0	0/1:17,7:26:55,0,230
-chr21	17812811	chr21:17812811:M	AAAAAAACAAAAAAAAACAAACAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/0:24,0:24:0,71,255	0/1:11,12:23:153,0,135
-chr21	17821900	chr21:17821900:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:1,15:17:251,32,0	0/1:13,12:26:137,0,163
-chr21	17826778	chr21:17826778:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:28:0,45,255	0/1:8,7:18:77,0,104	0/0:16,2:18:0,17,247
-chr21	17828370	chr21:17828370:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:32:255,83,0	1/1:0,31:32:255,94,0	1/1:2,30:34:255,63,0
-chr21	17833430	chr21:17833430:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:23:0,48,255	0/1:9,4:15:43,0,113	0/0:24,0:25:0,70,255
-chr21	17854771	chr21:17854771:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,26:40:255,0,144	1/1:2,34:38:255,76,0	0/0:33,1:34:0,82,255
-chr21	17858731	chr21:17858731:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,11:34:103,0,255	0/1:3,15:20:214,0,5	0/0:40,1:45:0,110,255
-chr21	17859355	chr21:17859355:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17:39:211,0,255	1/1:0,26:29:255,84,0	0/1:17,21:38:255,0,197
-chr21	17859472	chr21:17859472:M	CTTTCTCTTTCT	<1.8>	.	.	Motif=CTTTCT	GT:AD:DP:PL	0/1:20,20:40:255,0,255	1/1:0,38:38:255,114,0	0/0:33,0:33:0,99,255
-chr21	17863072	chr21:17863072:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,7,0,7:16:255,195,183,255,189,255,108,0,116,174	3/3:0,0,0,17:19:255,255,255,255,255,255,57,57,51,0	1/2:1,11,6,0:18:255,83,48,136,0,144,255,100,193,255
-chr21	17863624	chr21:17863624:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,17,1:43:255,0,255,255,255,255	1/1:0,27,2:31:255,87,0,255,55,255	0/2:11,1,16:29:219,225,255,0,189,127
-chr21	17865546	chr21:17865546:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,16:22:255,0,98	1/1:0,21:24:255,71,0	0/1:3,13:22:255,0,51
-chr21	17879632	chr21:17879632:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,1:2:12,0,6	1/1:0,0:1:1,1,0	0/1:1,4:6:51,0,10
-chr21	17880386	chr21:17880386:M	AAAAAACAAAAAAAAAAAAAAA	<29>,<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:4:92,10,0,61,9,52	2/2:0,0,3:3:89,57,49,9,9,0	1/2:0,4,3:7:181,50,29,66,0,46
-chr21	17882185	chr21:17882185:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:21:255,61,0	1/1:1,16:19:255,38,0	1/1:0,36:37:255,109,0
-chr21	17884241	chr21:17884241:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1:41:0,101,255	0/0:31,1:32:0,76,255	0/1:18,12:31:138,0,238
-chr21	17891086	chr21:17891086:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/0:21,0:24:0,66,255	0/1:5,15:23:231,0,23
-chr21	17896552	chr21:17896552:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,2:53:0,118,255	0/0:33,2:35:0,67,255	0/1:24,18:43:207,0,255
-chr21	17902139	chr21:17902139:M	TTTTTTTTTGTTTTTTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTT	<10.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,14:14:255,41,0	1/1:1,14:15:241,26,0	1/1:0,6:9:112,13,0
-chr21	17905587	chr21:17905587:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:34:224,0,161	1/1:3,25:29:255,34,0	0/1:22,16:39:164,0,255
-chr21	17917877	chr21:17917877:M	GTGTGTGTGTGTGTATGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/0:38,0:38:0,114,255	0/1:9,15:26:255,0,183	0/1:17,12:29:243,0,255
-chr21	17923463	chr21:17923463:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,63,255	0/1:5,5:11:99,0,103	0/1:8,1:10:0,0,187
-chr21	17926377	chr21:17926377:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:27:116,0,165	1/1:0,21:26:255,75,0	0/1:10,10:20:114,0,114
-chr21	17927209	chr21:17927209:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,11:35:54,0,194	0/1:11,9:25:94,0,69	0/0:23,3:26:0,35,252
-chr21	17929817	chr21:17929817:M	GGAGGGAGTGGGGAGGGAG	<2>	.	.	Motif=GGAG	GT:AD:DP:PL	0/0:38,2:40:0,65,255	0/1:13,22:35:255,0,254	0/1:16,17:33:255,0,255
-chr21	17934227	chr21:17934227:M	ATAAAAATAAAAAAAAAA	<2.8>	.	.	Motif=ATAAAA	GT:AD:DP:PL	0/0:23,2:25:0,33,255	0/1:13,21:34:255,0,165	0/1:13,18:31:255,0,173
-chr21	17934431	chr21:17934431:M	CTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:21,13:34:255,0,255	0/1:21,26:48:255,0,255
-chr21	17936465	chr21:17936465:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:37:0,90,255	0/1:16,15:35:160,0,217	0/1:18,20:41:240,0,233
-chr21	17938384	chr21:17938384:M	ATATATATAGATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:19,13:32:141,0,249	0/0:32,0:32:0,95,255
-chr21	17941287	chr21:17941287:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,7:14:93,0,49	0/1:4,4:9:43,0,43	1/1:0,7:10:131,24,0
-chr21	17945210	chr21:17945210:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,1,7:17:177,113,238,0,130,132	0/1:13,7,0:22:131,0,255,121,255,255	1/2:0,3,10:14:255,183,147,53,0,13
-chr21	17947533	chr21:17947533:M	ACACACACACAGACACACACACACACACACACACA	<16.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,26,0:42:255,0,182,255,255,255	0/2:16,1,16:33:191,255,255,0,224,203	1/1:0,34,0:35:255,103,0,255,105,255
-chr21	17948311	chr21:17948311:M	AAAAAAGAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:35:200,0,255	0/0:41,0:41:0,121,255	1/1:0,46:46:255,136,0
-chr21	17950493	chr21:17950493:M	ACACAACACACACACACACACACACACACACACACACACACAC	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:8,6:15:72,0,99	0/0:8,1:11:0,10,120	1/1:0,13:14:235,41,0
-chr21	17951108	chr21:17951108:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<14>,<15>,<19>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,23,16,0:40:255,255,255,253,255,183,255,255,0,255,255,255,255,255,255	3/4:0,1,1,17,9:29:255,255,255,255,255,255,255,255,255,255,255,255,255,0,255	1/2:0,29,13,0,0:43:255,238,110,255,0,255,255,201,255,255,255,239,255,255,255
-chr21	17952195	chr21:17952195:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,17	0/1:2,3:8:50,0,12	.
-chr21	17956280	chr21:17956280:M	CTCTCTCTCTC	<3.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:14,20:34:255,0,255	0/0:15,0:15:0,45,255	1/1:0,42:42:255,126,0
-chr21	17963064	chr21:17963064:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:13:157,31,0	0/0:0,0:1:0,0,0	1/1:0,10:10:144,29,0
-chr21	17963074	chr21:17963074:M	AATAATAATAATAATAATAATAA	<6.3>,<6.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/2:1,13,13:30:255,93,33,113,0,42	2/2:0,0,28:28:255,255,199,80,63,0	1/1:0,28,0:35:255,104,0,255,78,248
-chr21	17965912	chr21:17965912:M	TTTTTTTTTTTTTTTT	<17>,<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,15,8:26:255,255,255,165,162,93,255,255,0,208	1/3:0,9,0,7:16:255,213,186,255,119,255,153,0,250,238	2/2:0,2,19,2:27:255,255,255,55,10,0,255,255,38,255
-chr21	17966892	chr21:17966892:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,14:27:182,0,154	0/1:18,11:33:116,0,239	0/0:35,0:36:0,105,255
-chr21	17973395	chr21:17973395:M	TTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<7.4>,<7.6>,<8>	.	.	Motif=TTTTC	GT:AD:DP:PL	3/3:0,0,0,4:4:73,83,113,83,112,111,12,12,12,0	0/1:3,4,2,1:10:88,0,70,41,29,77,88,41,69,146	0/2:4,1,10,0:15:149,135,231,0,53,29,186,232,62,255
-chr21	17976271	chr21:17976271:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:5:115,15,0	.
-chr21	17977365	chr21:17977365:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:10:17,0,101	0/0:14,0:18:0,52,255	1/1:1,9:10:144,11,0
-chr21	17978717	chr21:17978717:M	AAAAAAGAAAAAAAAAGAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:19:93,0,69	0/1:9,10:20:91,0,76	1/1:1,13:15:178,25,0
-chr21	17988403	chr21:17988403:M	TTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:16,13:31:154,0,229	0/1:15,6:25:36,0,228	1/1:1,18:19:255,38,0
-chr21	17991659	chr21:17991659:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,13,0:20:255,0,95,236,95,255	1/2:0,10,8:21:255,114,76,194,0,142	0/0:10,0,2:13:0,30,255,0,174,141
-chr21	17992719	chr21:17992719:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,4:6:120,0,8	1/1:0,4:6:151,18,0	0/0:0,0:2:0,2,3
-chr21	18001774	chr21:18001774:M	TTTTTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3:7:32,52,174,0,61,43	0/1:2,7,2:14:216,0,44,194,0,216	0/2:4,0,1:6:3,17,135,0,67,53
-chr21	18003122	chr21:18003122:M	AAAAAAAAAAAAAACAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:14:165,0,126	0/1:6,8:17:170,0,143	0/0:16,0:18:0,53,255
-chr21	18003387	chr21:18003387:M	TTATTTTATTTTATT	<2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:15,28:43:255,0,163	0/1:13,9:22:99,0,172	0/0:27,0:27:0,80,255
-chr21	18008313	chr21:18008313:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,20:36:255,0,197	1/1:0,46:47:255,138,0	0/0:39,1:41:0,102,255
-chr21	18028209	chr21:18028209:M	CCTCCCCTCCCCTCCCCTCCCCTCCCCTTCCCCTTCCCCT	<7>,<8.2>	.	.	Motif=CCTCC	GT:AD:DP:PL	1/2:0,4,3:8:51,13,30,49,0,53	1/2:0,6,2:9:67,7,8,72,0,86	0/0:8,2,1:11:0,5,94,14,34,40
-chr21	18028246	chr21:18028246:M	CCTTTTCCTTTTCTTTTTCTTTTTCCTTTTCC	<2.3>,<6>	.	.	Motif=CCTTTT	GT:AD:DP:PL	1/2:0,1,6:18:179,148,171,52,0,48	1/2:0,3,4:8:160,96,102,73,0,62	0/2:6,0,4:11:69,95,255,0,136,115
-chr21	18028278	chr21:18028278:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<12.2>,<13.2>	.	.	Motif=CCTT	GT:AD:DP:PL	1/2:0,5,6:11:242,73,43,63,0,31	1/1:0,1,0:3:29,3,0,15,3,12	0/2:0,0,11:14:193,128,147,0,42,10
-chr21	18050927	chr21:18050927:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:43:0,126,255	0/0:31,3:37:0,55,255	0/1:24,18:44:214,0,255
-chr21	18056477	chr21:18056477:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/0:23,0:23:0,67,255	0/1:15,13:28:151,0,187
-chr21	18059494	chr21:18059494:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:39:255,96,0	1/1:1,34:37:255,91,0	0/1:17,11:29:113,0,231
-chr21	18084921	chr21:18084921:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/0:15,0:17:0,49,255	0/1:10,11:23:133,0,116
-chr21	18090727	chr21:18090727:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:9:0,5,103	0/1:3,5:10:61,0,37	0/1:9,11:23:162,0,95
-chr21	18108148	chr21:18108148:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:25:0,42,255	0/0:22,0:29:0,80,255	0/1:18,27:46:255,0,255
-chr21	18108838	chr21:18108838:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,14:25:255,250,180,178,0,110	1/2:0,15,10:25:255,171,98,255,0,184	0/1:16,16,0:33:255,0,255,255,255,255
-chr21	18117692	chr21:18117692:M	AATAAATAAATAAGATAAAATAAATAAATAAATAAGAAGAAATAAATAAATAAA	<12.5>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:7,10:20:81,0,41	0/1:3,5:11:40,0,15	0/0:16,0:18:0,44,201
-chr21	18122549	chr21:18122549:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:2,42:44:255,94,0	0/1:23,15:38:166,0,255
-chr21	18126596	chr21:18126596:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,21:40:255,0,226	0/1:23,14:38:145,0,255	0/1:17,23:40:255,0,190
-chr21	18129270	chr21:18129270:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:45:255,132,0	1/1:0,39:40:255,117,0	0/1:28,20:49:245,0,255
-chr21	18129873	chr21:18129873:M	TCTCTCTCTCTGTCTTTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:11,14:34:255,0,255	0/1:18,14:37:255,0,255	0/1:9,13:27:255,0,192
-chr21	18129893	chr21:18129893:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGT	<19.5>,<20.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,17,12,0:30:255,210,122,255,0,221,255,210,255,255	1/2:0,17,9,0:27:255,151,74,255,0,208,255,151,255,255	1/3:1,9,0,9:20:255,136,232,255,255,255,245,0,163,233
-chr21	18136106	chr21:18136106:M	AAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:87,9,0	1/1:0,2:4:71,9,0	0/1:0,2:5:59,0,1
-chr21	18136720	chr21:18136720:M	ATATATATATATATATATATATATATATATATATGTATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,17:18:255,36,0	1/1:0,0:2:16,4,0	1/1:0,5:6:68,4,0
-chr21	18145436	chr21:18145436:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:84,14,5,48,0,38	0/2:1,0,3:4:36,39,61,0,15,4	.
-chr21	18148885	chr21:18148885:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:33:255,94,0	1/1:3,45:49:255,91,0	1/1:0,30:35:255,98,0
-chr21	18151083	chr21:18151083:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,12:12:255,36,0	1/1:0,17:19:255,56,0
-chr21	18151989	chr21:18151989:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:19:255,57,0	1/1:0,22:25:255,69,0	1/1:0,17:18:255,54,0
-chr21	18158072	chr21:18158072:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,21:32:255,0,59	1/1:2,19:23:255,33,0	1/1:3,34:38:255,59,0
-chr21	18158839	chr21:18158839:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:10:143,28,0	1/1:1,6:8:85,8,0	1/1:1,5:8:72,5,0
-chr21	18158854	chr21:18158854:M	AAGAAGAAGAAAAGAA	<3.7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,1:1:20,3,0	1/1:0,1:1:20,3,0	1/1:0,3:3:61,9,0
-chr21	18162412	chr21:18162412:M	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCT	<22.5>,<25.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,19:19:255,255,255,57,57,0	1/2:1,8,11:20:255,255,255,113,0,185	1/2:0,10,2:13:183,49,29,162,0,250
-chr21	18167202	chr21:18167202:M	TCTCTCTCTCT	<3.5>,<7.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,16:17:255,255,255,48,51,0	2/2:0,0,17:20:255,255,255,51,60,0	1/1:0,3,0:4:76,9,0,84,12,105
-chr21	18167212	chr21:18167212:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,13:24:255,0,73	0/1:8,12:21:255,0,167	0/0:9,0:13:0,39,255
-chr21	18171115	chr21:18171115:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,24,18:44:255,255,215,255,0,255	1/2:2,15,14:32:255,220,169,192,0,197	1/1:1,51,1:53:255,138,0,255,137,255
-chr21	18171163	chr21:18171163:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:21:255,62,0	1/1:0,12:12:223,35,0	1/1:0,26:26:255,77,0
-chr21	18171737	chr21:18171737:M	TTTTTTTTTTTTTCTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,17:34:255,255,233,255,0,194	1/2:0,21,16:38:255,241,175,255,0,255	2/2:1,1,35:37:255,255,255,90,90,0
-chr21	18174099	chr21:18174099:M	ATATATATATATATATATCTTGGTGTATATATATATATATATATATATATATATATATATATA	<21.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,5:5:138,15,0	1/1:0,5:5:137,15,0	0/0:0,0:1:0,0,0
-chr21	18189630	chr21:18189630:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:53,9,0	0/1:3,3:6:33,0,33	0/1:1,2:5:43,0,3
-chr21	18194604	chr21:18194604:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:145,0,182	0/1:16,11:28:111,0,210	0/1:19,18:39:231,0,229
-chr21	18195029	chr21:18195029:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<9.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:5,6:11:78,0,58	0/1:11,12:23:161,0,139
-chr21	18201801	chr21:18201801:M	TTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:8:0,24,202	0/0:8,0:8:0,24,220	0/1:5,3:10:59,0,116
-chr21	18205738	chr21:18205738:M	TTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:22:255,65,0,255,66,255	0/1:11,12,1:25:138,0,132,180,165,255	1/2:1,9,6:20:255,137,136,152,0,239
-chr21	18206864	chr21:18206864:M	ATTATTATTATTATTATTATTATTATTATTATTTTATTAT	<11.3>,<12.3>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,29,0:29:255,87,0,255,86,255	0/1:3,11,0:14:255,0,45,196,53,213	1/2:0,12,5:17:255,80,44,223,0,177
-chr21	18207660	chr21:18207660:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:103,18,0	1/1:0,6:7:109,20,0	1/1:0,1:4:17,3,0
-chr21	18208172	chr21:18208172:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:38:0,97,255	0/1:21,0:29:22,0,255	0/1:13,11:30:243,0,255
-chr21	18211142	chr21:18211142:M	ACACACACACACACACACACACACACACTCACACTCACAC	<18>,<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,18,1:20:255,255,255,57,60,0,255,255,40,255	2/3:0,0,13,8:22:255,255,255,137,140,76,226,238,0,176	1/2:0,14,8,0:22:255,218,180,255,0,255,255,143,255,255
-chr21	18215200	chr21:18215200:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:41:0,120,255	0/0:38,1:39:0,97,255	0/1:25,17:43:176,0,255
-chr21	18219779	chr21:18219779:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:57,0:58:0,171,255	0/0:44,0:44:0,129,255	0/1:25,23:51:255,0,255
-chr21	18232943	chr21:18232943:M	ATATATATATATATATATATATATATATATGTATATATAT	<21>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,5:15:44,0,125	0/0:3,0:4:0,12,62	1/1:0,2:3:34,6,0
-chr21	18241250	chr21:18241250:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0,0:25:0,73,255,75,255,255	0/2:13,1,13:31:255,255,255,0,213,255	0/1:22,21,0:44:255,0,255,255,255,255
-chr21	18243548	chr21:18243548:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:39:0,105,255	0/1:19,14:33:148,0,235	0/0:20,1:23:0,46,255
-chr21	18251520	chr21:18251520:M	TATTTATTTTATTTATTATTT	<3.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,3:3:83,9,0	.	1/1:0,1:1:27,3,0
-chr21	18254135	chr21:18254135:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,0:46:0,135,255	0/1:23,26:51:255,0,255	0/0:52,1:53:0,138,255
-chr21	18254719	chr21:18254719:M	TCTATCTATCTATCTA	<3>	.	.	Motif=TCTA	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/1:19,29:48:255,0,204	0/0:42,0:42:0,124,255
-chr21	18260821	chr21:18260821:M	AACAACAACAACAACAACAACAACAACAAAAAAACACCACCAACAACAACAA	<15.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:11,7:18:134,0,244	0/0:22,0:22:0,66,255
-chr21	18261361	chr21:18261361:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1:21:0,41,255	0/0:17,2:21:0,26,255	0/1:17,10:29:114,0,219
-chr21	18263902	chr21:18263902:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2,0:40:0,81,255,114,255,255	0/1:23,13,0:38:111,0,255,186,255,255	0/2:14,2,11:32:232,166,255,0,244,255
-chr21	18264602	chr21:18264602:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:2,4,123,0,46,40	1/2:0,3,2:6:111,27,41,89,0,84	0/2:4,0,3:7:21,42,185,0,55,35
-chr21	18264624	chr21:18264624:M	AGAGAGAGAGA	<7.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:16,8:27:97,0,255	0/1:12,5:17:62,0,222
-chr21	18265311	chr21:18265311:M	ATATATATATAT	<5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:34:0,78,255	0/0:24,0:41:0,102,255	0/1:31,19:63:66,0,255
-chr21	18268938	chr21:18268938:M	CTCTCTCTCTCT	<4>	.	.	Motif=CT	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/1:23,24:47:255,0,255	0/1:19,32:51:255,0,255
-chr21	18271586	chr21:18271586:M	TTTTCTTTTCTTTTCTTTTTTTT	<5.6>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:17,18:35:243,0,224	0/1:21,21:42:255,0,255	0/0:47,0:47:0,139,255
-chr21	18276756	chr21:18276756:M	TTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0,0:6:0,18,170,18,170,170	0/2:4,0,7:14:217,200,255,0,105,81	1/1:0,11,0:13:255,39,0,255,39,255
-chr21	18280594	chr21:18280594:M	AACAACAAAACAACAA	<4.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:24,0:27:0,51,255	0/1:7,7:15:71,0,62	0/0:18,0:19:0,49,255
-chr21	18281026	chr21:18281026:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,3:50:0,91,255	0/1:27,23:52:255,0,255	0/0:44,0:44:0,130,255
-chr21	18285001	chr21:18285001:M	AAAAAAAAAAAAGAGAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:24:255,70,0	1/1:0,29:30:255,88,0	1/1:0,21:22:255,64,0
-chr21	18288529	chr21:18288529:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,3:5:95,52,75,53,0,45	1/1:0,3,0:5:109,15,0,111,15,114	2/2:0,0,2:2:34,40,58,6,6,0
-chr21	18300357	chr21:18300357:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:1,23:24:255,53,0	1/1:1,32:34:255,82,0
-chr21	18308377	chr21:18308377:M	ACACACACACACACACACACACACACACA	<17.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:14,1,8:23:171,184,255,0,255,255	0/0:20,0,0:20:0,60,255,60,255,255	1/2:0,15,10:25:255,255,214,255,0,255
-chr21	18308599	chr21:18308599:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,15:34:255,239,182,255,0,250	2/2:2,2,25:29:255,255,255,49,49,0	1/1:0,36,1:40:255,116,0,255,99,255
-chr21	18310934	chr21:18310934:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14,0:15:255,16,0,255,41,252	1/1:0,23,1:29:255,83,0,255,65,255	0/2:2,0,15:19:255,255,255,0,63,16
-chr21	18313336	chr21:18313336:M	TCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:20,15:39:207,0,255	1/1:0,27:31:255,80,0	0/1:27,19:49:255,0,255
-chr21	18313350	chr21:18313350:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,16:40:255,0,255	1/1:0,24:24:255,72,0	0/0:24,0:24:0,72,255
-chr21	18313894	chr21:18313894:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,0,14:27:190,244,255,0,186,114	0/0:23,0,1:25:0,74,255,56,255,255	1/2:0,12,17:34:255,255,255,255,0,255
-chr21	18315495	chr21:18315495:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,6:18:43,0,139	0/0:6,0:6:0,17,92	0/1:14,5:19:23,0,164
-chr21	18316025	chr21:18316025:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,26:26:255,76,0	1/1:0,16:16:255,47,0	1/1:0,30:33:255,96,0
-chr21	18319423	chr21:18319423:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:81,0,54	0/0:5,0:7:0,9,83	0/1:3,2:5:20,0,37
-chr21	18321350	chr21:18321350:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:52,2,0	0/1:2,2:7:41,0,15	0/1:1,3:5:50,0,3
-chr21	18331073	chr21:18331073:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,6:7:155,0,7	0/0:4,0:5:0,13,115	1/1:0,2:3:55,6,0
-chr21	18335940	chr21:18335940:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:27:255,70,0	1/1:1,31:32:255,76,0	1/1:1,30:32:255,76,0
-chr21	18338695	chr21:18338695:M	AGAGAGAGAGACAGAGACAGACAGAGAGAGAGATAAAGAGAGAGAAAGAGAGAGAGAG	<31>	.	.	Motif=AG	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/1:3,7:10:161,0,51	0/0:16,0:16:0,48,255
-chr21	18365744	chr21:18365744:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,69,255	0/1:9,3:14:11,0,116	0/1:3,3:7:44,0,29
-chr21	18369975	chr21:18369975:M	AAAAAAAAAAAAAAGAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,5:11:161,64,61,35,0,53	1/2:1,4,6:12:208,94,80,41,0,44	2/2:0,0,8:9:236,174,152,27,26,0
-chr21	18372099	chr21:18372099:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,6,0:17:55,0,142,104,190,255	1/2:1,7,10:20:255,242,224,103,0,154	0/1:4,7,0:11:87,0,36,118,68,255
-chr21	18376201	chr21:18376201:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:2,26:29:255,50,0	1/1:2,35:43:255,87,0
-chr21	18380168	chr21:18380168:M	CACACACACACACACACACACACACACACACACACACAC	<20.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,10,0:21:114,0,119,147,173,255	1/1:2,15,0:17:218,16,0,224,49,255	0/2:8,2,13:24:255,190,255,0,114,172
-chr21	18387597	chr21:18387597:M	ACACACACACACACATACACACACACACACACACACACACACACACACACACACGCACACACAC	<27>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,45,0	1/1:0,10:13:255,15,0	0/1:6,6:12:128,0,139
-chr21	18396809	chr21:18396809:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<12.8>,<14.8>,<33.8>	.	.	Motif=TCTA	GT:AD:DP:PL	1/2:0,9,4,5:18:255,98,67,210,0,198,255,47,168,255	2/3:0,0,3,7:12:150,145,142,71,71,60,79,74,0,60	1/2:1,7,4,0:12:238,72,71,138,0,153,249,97,173,255
-chr21	18402528	chr21:18402528:M	AAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,2:8:179,32,12,86,0,75	0/2:1,1,6:8:170,83,88,0,9,6	0/0:8,0,0:10:0,24,230,30,240,255
-chr21	18407426	chr21:18407426:M	TTTCTTTTTCTTTTTTTCTTTTCTTTTTTTTTTTTTTT	<5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:4,22:26:255,0,30	0/1:1,14:17:255,0,2	0/0:8,0:10:0,27,235
-chr21	18410117	chr21:18410117:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,18:30:246,0,118	0/0:19,0:21:0,61,255	0/1:11,8:19:89,0,143
-chr21	18410599	chr21:18410599:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:39:230,0,255	0/0:42,1:43:0,108,255	0/1:33,21:57:226,0,255
-chr21	18411340	chr21:18411340:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,21:36:255,0,154	0/1:19,20:39:237,0,219	0/0:38,0:38:0,112,255
-chr21	18413187	chr21:18413187:M	CCTTCCTGCCTTCCCTCCCTCCCTCCCTTCCTCTTCCTTCCTTCCTTTTCTCTCTCTTTCTTCCTTCCTT	<12>	.	.	Motif=CCTT	GT:AD:DP:PL	0/1:3,1:5:13,0,68	0/1:5,3:8:49,0,107	0/1:2,0:5:12,0,42
-chr21	18413585	chr21:18413585:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:21:236,0,204	0/1:11,6:19:118,0,240	0/0:12,0:13:0,36,255
-chr21	18419221	chr21:18419221:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:105,0,14	0/1:1,1:4:34,0,19	0/1:2,2:5:44,0,54
-chr21	18423410	chr21:18423410:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:12:65,0,65	0/0:14,1:15:0,26,223	0/1:2,7:10:104,0,7
-chr21	18440373	chr21:18440373:M	AAAAAAAAAAAAAAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:196,24,0	1/1:0,8:9:225,27,0	1/1:0,2:2:54,6,0
-chr21	18441282	chr21:18441282:M	AAACAAAACAAAACAAAACAAAACAAAACCAAAAAAACAAA	<11.2>	.	.	Motif=AAACA	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:10,7:17:141,0,221	0/0:30,0:30:0,90,255
-chr21	18441607	chr21:18441607:M	AAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,9:13:229,0,49	1/1:0,12:15:255,38,0	1/1:1,19:20:255,31,0
-chr21	18441662	chr21:18441662:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<11>,<12>,<13>,<16>	.	.	Motif=ATT	GT:AD:DP:PL	3/4:0,0,0,8,13:21:255,255,255,255,255,255,247,255,255,255,228,228,152,0,192	2/3:0,0,8,5,0:14:255,255,255,90,100,62,141,121,0,103,255,255,100,144,255	1/4:0,23,0,0,9:32:255,167,192,255,255,255,255,255,255,255,255,0,255,255,255
-chr21	18445207	chr21:18445207:M	TTTTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,17,10:31:255,147,220,255,0,255	0/2:7,0,12:21:172,208,255,0,117,62	1/2:0,15,10:28:255,182,206,255,0,255
-chr21	18447440	chr21:18447440:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:5:18,0,28	0/1:2,4:6:45,0,14	0/1:1,1:2:10,0,10
-chr21	18449859	chr21:18449859:M	ACACACACACACACACACGCACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,26:28:255,81,0	1/1:0,22:26:255,73,0	1/1:0,27:30:255,82,0
-chr21	18471477	chr21:18471477:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,26:45:255,0,225	0/1:14,23:38:255,0,148	0/1:27,23:50:255,0,255
-chr21	18472456	chr21:18472456:M	TATATATATATATATATATATATATA	<10>,<11>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,11,3,2:16:255,54,32,192,0,153,255,10,161,255	1/2:0,10,7,0:17:255,120,71,171,0,122,255,101,170,255	1/3:1,17,0,9:27:255,140,198,255,165,255,255,0,255,255
-chr21	18494091	chr21:18494091:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,18,1:29:255,0,100,255,165,255	1/2:2,12,9:23:255,124,92,143,0,165	0/1:16,9,0:25:90,0,215,138,255,255
-chr21	18494530	chr21:18494530:M	AAAAAACAAAACAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:18,12:30:125,0,229	0/0:38,0:38:0,112,255
-chr21	18496963	chr21:18496963:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,15:38:202,0,255	1/1:3,34:38:255,59,0	0/1:22,30:54:255,0,255
-chr21	18504705	chr21:18504705:M	TATATATATATATATATATATATATATATATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:5,0:6:0,17,153	.	1/1:0,4:4:135,12,0
-chr21	18506583	chr21:18506583:M	TTTTTTTTTTTCTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,19:32:255,0,255	1/1:0,32:32:255,96,0	0/1:24,20:45:255,0,255
-chr21	18506891	chr21:18506891:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:37:154,0,255	1/1:1,26:29:255,67,0	0/1:21,14:39:177,0,255
-chr21	18506936	chr21:18506936:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14,3:30:255,0,255,207,185,255	1/2:0,19,11:30:255,160,103,255,0,241	0/1:13,9,1:24:217,0,255,143,228,255
-chr21	18512845	chr21:18512845:M	CAAACAACAACAACAACAACAACAACAACAACAAAAAAAAAACAAAAACAAA	<6.2>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:10,16:26:255,0,175	1/1:0,36:36:255,108,0	0/1:6,14:20:255,0,91
-chr21	18513853	chr21:18513853:M	ATAAATAAATAAATAAATAAATAAATAA	<6>	.	.	Motif=ATAA	GT:AD:DP:PL	0/1:13,17:30:244,0,163	0/1:12,9:21:104,0,156	0/1:12,18:30:251,0,138
-chr21	18516435	chr21:18516435:M	ACACACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,19:39:247,0,255	0/1:20,21:42:255,0,236	0/1:24,18:43:210,0,255
-chr21	18519127	chr21:18519127:M	AAACAAACAAACAAACAAA	<3.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:8,15:23:225,0,87	0/1:18,11:29:116,0,242	0/1:23,11:34:109,0,255
-chr21	18519164	chr21:18519164:M	AACAACAACAACAACAACAACAA	<6.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:15,13:28:145,0,177	0/1:18,12:30:113,0,210	0/1:17,16:33:178,0,191
-chr21	18527500	chr21:18527500:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:24:132,0,151	1/1:1,18:20:255,41,0	0/1:12,12:25:149,0,143
-chr21	18528541	chr21:18528541:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:11,0,10:23:243,255,255,0,255,255	1/2:0,10,6:19:255,160,122,255,0,255	0/2:14,0,10:28:255,255,255,0,255,255
-chr21	18543627	chr21:18543627:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:32:255,94,0	1/1:3,30:33:255,44,0	1/1:4,41:45:255,60,0
-chr21	18548101	chr21:18548101:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:34:245,0,171	0/1:17,13:32:157,0,199	0/1:7,20:30:255,0,47
-chr21	18555872	chr21:18555872:M	ATATATATATATATA	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,22:40:255,0,194	1/1:0,30:31:255,88,0	0/1:23,26:50:255,0,255
-chr21	18570664	chr21:18570664:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:38:255,0,173	0/0:41,0:43:0,126,255	1/1:2,37:41:255,84,0
-chr21	18588171	chr21:18588171:M	AAAAAAAAAAAAAAAAAAAAGAAAGAAAGGAAAAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:43,0,33	0/1:3,1:5:4,0,40	0/1:1,3:7:54,0,8
-chr21	18597484	chr21:18597484:M	AAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,16:30:255,255,255,196,0,255	1/1:2,35,0:37:255,74,0,255,111,255	2/2:1,0,33:42:255,255,255,94,98,0
-chr21	18613195	chr21:18613195:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:11,0,13,0:25:158,181,255,0,181,122,226,255,161,255	2/3:2,2,11,5:20:202,174,255,54,109,94,170,154,0,255	0/1:5,12,1,0:20:255,0,88,209,69,242,255,87,255,255
-chr21	18625585	chr21:18625585:M	TTTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:22,0,13:35:255,211,255,0,255,255	0/0:41,0,0:42:0,126,255,123,255,255	1/2:0,12,12:26:255,193,119,214,0,142
-chr21	18630038	chr21:18630038:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,11:34:100,0,255	0/0:25,2:29:0,50,255	1/1:1,15:18:255,34,0
-chr21	18632516	chr21:18632516:M	GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,15:29:255,244,201,255,0,182	1/1:0,31,0:33:255,99,0,255,97,255	2/2:0,1,39:40:255,255,255,118,99,0
-chr21	18635482	chr21:18635482:M	ACACATACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<19.5>,<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/4:0,5,0,0,8:14:255,142,206,255,224,255,255,219,255,255,150,0,148,151,127	3/4:1,0,0,4,3:9:90,113,218,113,218,218,36,83,83,63,62,120,120,0,106	1/2:0,17,15,0,0:33:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
-chr21	18638775	chr21:18638775:M	CACACACACCATACACACACACACACAC	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,20:41:255,0,230	0/0:32,0:32:0,94,255	0/1:17,25:43:255,0,180
-chr21	18648171	chr21:18648171:M	CTATCTATCTAGCTATCATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATC	<19.2>,<20.2>	.	.	Motif=CTAT	GT:AD:DP:PL	0/2:2,0,1:3:18,18,48,0,37,49	0/1:9,3,0:12:19,0,127,46,159,255	1/2:0,6,3:9:171,55,29,94,0,85
-chr21	18648690	chr21:18648690:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,42:42:255,124,0	1/1:0,40:40:255,118,0
-chr21	18658665	chr21:18658665:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,2:35:0,66,255	0/1:14,14:30:162,0,164	0/0:17,2:22:0,28,255
-chr21	18661751	chr21:18661751:M	TTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:23,14:37:255,0,255	0/0:41,0:41:0,123,255	0/1:16,16:32:255,0,255
-chr21	18668457	chr21:18668457:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,21:28:255,0,111	0/0:37,0:40:0,114,255	0/1:21,15:38:255,0,255
-chr21	18669773	chr21:18669773:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTATT	<9.7>,<15.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,13,4:17:255,76,76,255,0,255	2/2:0,0,10:10:181,210,255,29,30,0	0/1:0,13,0:17:255,0,0,255,37,255
-chr21	18674538	chr21:18674538:M	ATATATATATGTGTATATATATACATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,6:16:85,0,195	0/0:11,0:11:0,33,255	0/0:15,2:17:0,5,255
-chr21	18682771	chr21:18682771:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:124,0,162	0/0:22,0:22:0,65,255	0/1:12,18:30:242,0,133
-chr21	18683495	chr21:18683495:M	TGTGTGTATGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,18:31:253,0,137	0/0:31,0:34:0,99,255	0/1:12,20:32:255,0,129
-chr21	18684544	chr21:18684544:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:14:37,0,45	0/0:7,0:10:0,10,69	0/0:9,0:9:0,25,105
-chr21	18692109	chr21:18692109:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:88,10,0	.	1/1:0,1:3:43,6,0
-chr21	18695530	chr21:18695530:M	CACACACACACACACACACACACACACACACA	<21>,<23>,<24>,<25>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,7,8,0:15:255,255,255,138,138,95,122,121,0,78,255,255,116,121,255	1/2:0,12,3,0,0:17:255,86,42,255,0,255,255,55,255,255,255,84,255,255,255	3/4:0,0,0,7,3:10:255,255,255,203,203,180,52,52,51,22,119,119,99,0,90
-chr21	18697021	chr21:18697021:M	TATATACATATATATAT	<10.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,43,0:43:255,129,0,255,129,255	1/2:0,19,7:27:255,197,140,255,0,255	1/1:0,36,0:36:255,108,0,255,108,255
-chr21	18705814	chr21:18705814:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:1,46:47:255,120,0	1/1:1,63:64:255,170,0
-chr21	18706968	chr21:18706968:M	TCCCTCTCCCTCTCCTTCTCC	<1.5>	.	.	Motif=TCCCTC	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:8,7:15:136,0,159	0/0:12,0:12:0,36,255
-chr21	18706982	chr21:18706982:M	CTTCTCCTTTTTCTTCTTCT	<2.3>,<7.3>	.	.	Motif=CTT	GT:AD:DP:PL	2/2:1,0,15:19:111,166,255,17,54,0	1/2:4,9,7:24:255,28,195,232,0,242	2/2:1,0,11:17:75,107,255,8,30,0
-chr21	18716677	chr21:18716677:M	GAAGGAAGGAAGGAAGGAAG	<6.2>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,32:36:255,87,0	1/1:0,32:34:255,92,0	1/1:0,47:48:255,139,0
-chr21	18727579	chr21:18727579:M	AAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,19,0:46:229,0,255,255,255,255	1/2:1,11,13:26:255,255,255,183,0,255	0/0:47,0,0:49:0,144,255,147,255,255
-chr21	18736210	chr21:18736210:M	AAAAAAAACAAAAAACAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,59,0	0/1:18,14:33:155,0,237	1/1:0,25:25:255,74,0
-chr21	18741702	chr21:18741702:M	ACACACACACACACACACACACACACACGCACACACACACAC	<23>,<29>,<30>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,11,6:17:255,255,255,108,108,58,197,197,0,148	1/3:1,8,0,6:15:255,140,142,255,101,255,191,0,225,207	2/2:0,0,4,0:4:125,125,125,12,12,0,82,82,12,70
-chr21	18758953	chr21:18758953:M	TTTTTTTTTTTTCTTTACTTTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:190,23,0	0/1:2,4:7:95,0,31	1/1:1,11:12:255,11,0
-chr21	18766361	chr21:18766361:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:43:255,125,0	0/1:17,13:33:255,0,255	1/1:0,62:67:255,192,0
-chr21	18784936	chr21:18784936:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,27:52:255,0,255	1/1:0,59:59:255,174,0	0/1:24,28:52:255,0,255
-chr21	18790419	chr21:18790419:M	ACACACACACACACACACACACACACACACACA	<11.5>,<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,14,0:33:255,0,255,255,255,255	0/1:7,21,0:29:255,0,133,255,195,255	0/2:11,0,14:26:255,255,255,0,255,247
-chr21	18791797	chr21:18791797:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:20:30,0,210	0/1:9,8:18:84,0,110	0/1:11,11:22:128,0,128
-chr21	18796472	chr21:18796472:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:13:78,0,69	1/1:2,8:13:122,1,0	0/1:4,4:9:53,0,44
-chr21	18796761	chr21:18796761:M	CACACACACACACACACACACACATACACACACACACACACAGACACA	<25>	.	.	Motif=CA	GT:AD:DP:PL	1/1:3,28:32:255,39,0	0/1:5,2:8:12,0,73	1/1:1,19:20:255,41,0
-chr21	18800869	chr21:18800869:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,6:10:89,114,210,0,45,24	1/2:1,3,1:5:39,2,17,36,0,73	0/0:2,0,0:2:0,6,35,6,35,35
-chr21	18802832	chr21:18802832:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,21:35:255,0,140	1/1:1,35:38:255,80,0	0/1:24,23:47:255,0,255
-chr21	18807399	chr21:18807399:M	CACACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,8:21:95,0,177	0/1:9,11:20:142,0,103	0/1:16,13:29:161,0,212
-chr21	18816512	chr21:18816512:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,15:25:210,0,92	1/1:2,27:31:255,56,0	0/1:13,19:37:255,0,138
-chr21	18820528	chr21:18820528:M	TTTTCTTTTTTTTTCTTTTTTTTTTTTT	<30>,<31>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10,0:27:198,0,255,177,255,255	1/2:0,8,4:14:255,63,28,136,0,121	0/1:6,11,1:18:255,0,116,173,136,255
-chr21	18827960	chr21:18827960:M	TTTTATTTTATTTTATTTATATTTTATTTTATTTATATTTT	<7.8>,<9.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/2:0,12,9:21:255,255,235,255,0,255	1/2:0,10,6:16:255,170,136,255,0,255	2/2:0,0,8:10:255,255,255,29,29,0
-chr21	18829614	chr21:18829614:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,2:17:7,0,255	0/0:12,0:12:0,36,255	1/1:0,3:3:77,9,0
-chr21	18829624	chr21:18829624:M	ATATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,22:35:255,0,255	0/1:2,10:16:255,0,26	1/1:0,30:36:255,108,0
-chr21	18831803	chr21:18831803:M	TTTATTTATTTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,16:29:224,0,166	0/1:14,23:37:255,0,146	0/1:20,18:38:227,0,255
-chr21	18846158	chr21:18846158:M	AATTAATTAATTAATTAATT	<6>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:12,12:25:160,0,163	0/1:10,8:20:113,0,123	1/1:0,32:33:255,97,0
-chr21	18848036	chr21:18848036:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,15:43:255,0,255	0/1:15,13:28:255,0,255	1/1:0,27:32:255,93,0
-chr21	18856187	chr21:18856187:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,6:18:122,0,250	0/1:19,14:33:255,0,255	1/1:0,27:28:255,81,0
-chr21	18859202	chr21:18859202:M	TATATATATATATATATATATATATGTATATATATATATATATATATATATATATATGTATATATATATATATATATATATATATATA	<9>,<16>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9,0:10:255,27,0,255,27,255	1/1:0,11,0:11:255,33,0,255,33,255	1/2:0,12,5:18:255,141,105,255,0,255
-chr21	18870047	chr21:18870047:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,23:40:255,0,199	0/1:11,11:22:129,0,129	0/1:21,30:52:255,0,228
-chr21	18884525	chr21:18884525:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,7,0:13:174,0,107,185,131,255	0/1:19,7,0:26:126,0,255,176,255,255	1/2:0,11,8:21:255,210,171,255,0,237
-chr21	18885273	chr21:18885273:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,1,10:24:230,161,255,0,255,255	0/1:9,18,0:30:255,0,210,255,240,255	0/2:13,0,11:28:238,184,255,0,255,255
-chr21	18891946	chr21:18891946:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:11:84,0,89	0/1:2,2:6:53,0,41	0/0:1,0:3:0,3,29
-chr21	18892031	chr21:18892031:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,4:13:137,0,214	0/1:6,1:11:15,0,212	0/1:3,0:6:11,0,84
-chr21	18901690	chr21:18901690:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:31:255,54,0	1/1:1,19:22:255,46,0	0/1:13,7:20:70,0,181
-chr21	18908717	chr21:18908717:M	GTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<7>	.	.	Motif=GTTTT	GT:AD:DP:PL	0/1:9,14:23:203,0,106	0/1:18,8:26:68,0,251	1/1:0,30:30:255,89,0
-chr21	18912184	chr21:18912184:M	TTTTTGTTTGTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,36:39:255,96,0	1/1:0,37:37:255,109,0
-chr21	18915208	chr21:18915208:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:38:255,94,0	1/1:3,38:42:255,70,0	1/1:0,53:55:255,161,0
-chr21	18920922	chr21:18920922:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,49:49:255,144,0	1/1:0,49:49:255,145,0
-chr21	18923133	chr21:18923133:M	AGATATAGATATAGATATAGATATAGATATAGATATA	<7.2>,<8.2>	.	.	Motif=AGATAT	GT:AD:DP:PL	0/1:16,23,0:39:255,0,197,255,255,255	0/2:6,0,16:22:255,255,255,0,107,109	1/2:0,18,8:26:255,149,75,255,0,255
-chr21	18926815	chr21:18926815:M	CCTCCCTCCCTCCCTCTCTTTTTTCCTTCCTTCCTCCCTCCCTCCCTCCTTCCTTTCCTTTCTCCCTCCCTCCCTCCC	<18.5>	.	.	Motif=CCTC	GT:AD:DP:PL	0/0:4,0:16:0,4,31	0/1:3,3:15:15,0,15	1/1:1,8:21:74,13,0
-chr21	18927353	chr21:18927353:M	GTGTGTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,37:37:255,109,0	1/1:0,33:34:255,100,0
-chr21	18942345	chr21:18942345:M	TCTCCCTCTCTCTCTCTCTCTCTCTCAATCTCTCTCTCT	<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,17:17:255,51,0	1/1:0,18:18:255,54,0	1/1:0,29:30:255,90,0
-chr21	18944354	chr21:18944354:M	CACACACACACACACACACACACACACGCACACACACAC	<18.5>,<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,20,0:34:255,0,160,255,220,255	1/2:1,18,9:31:255,148,182,255,0,255	0/2:20,2,12:34:118,179,255,0,255,255
-chr21	18945814	chr21:18945814:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,11,8:21:255,255,255,236,236,202,255,255,0,255	1/2:0,17,18,0:40:255,255,255,255,0,255,255,255,255,255	1/3:0,19,0,7:27:255,203,147,255,204,255,255,0,255,255
-chr21	18946786	chr21:18946786:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:30,16:46:156,0,255	0/1:20,16:37:193,0,255
-chr21	18957953	chr21:18957953:M	AAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:29:0,54,255	0/1:21,9:33:160,0,255	0/1:11,8:25:155,0,251
-chr21	18964657	chr21:18964657:M	CACACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/1:10,4:18:18,0,153	0/1:14,13:27:147,0,164
-chr21	18970348	chr21:18970348:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:85,9,0	0/0:6,1:9:0,1,164	0/0:11,0:12:0,36,255
-chr21	18981079	chr21:18981079:M	AAAAAAAAAAACAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,103,255	0/1:15,9:24:86,0,191	0/1:17,17:34:205,0,206
-chr21	18989204	chr21:18989204:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,55:57:255,130,0	0/1:23,14:37:143,0,255	1/1:0,51:51:255,151,0
-chr21	18989649	chr21:18989649:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,14:39:150,0,255	0/1:19,18:37:213,0,231	0/1:26,20:46:235,0,255
-chr21	18992545	chr21:18992545:M	TTTTTTTTTTTATTATTTTTT	<20>,<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,10,10,0:25:231,142,204,141,0,200,255,143,240,255	2/3:0,0,13,6:21:255,255,255,84,87,31,148,183,0,130	1/2:1,10,10,0:26:213,128,201,128,0,201,245,144,245,255
-chr21	19009436	chr21:19009436:M	AAAAAAAAAAATAAAAAATAAATAAAAAATAAAATAAAAAAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:21:200,0,47	0/0:6,1:7:0,4,86	0/1:7,10:17:126,0,73
-chr21	19022611	chr21:19022611:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,16,11:29:255,191,255,255,0,255	1/2:0,24,18:42:255,255,255,255,0,255	1/2:0,21,15:36:255,255,255,255,0,255
-chr21	19023140	chr21:19023140:M	AAAATAAAATAAAATAAAATAAAAAAATAAAATAAAATAATAAAATAAAATAAAATAAAACAAAACAAAATAAAA	<60>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,10:12:255,0,27	0/1:1,3:4:86,0,20	0/1:5,7:12:191,0,121
-chr21	19025137	chr21:19025137:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:26:143,0,171	0/1:15,19:35:231,0,162	0/1:19,20:40:242,0,233
-chr21	19036579	chr21:19036579:M	TTTCTTTCTTTCTTTCTTTCTTT	<3>,<3.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,4,3:7:188,22,1,26,0,5	1/1:0,0,0:1:13,3,0,6,1,4	0/0:13,1,0:17:0,10,255,17,255,255
-chr21	19036599	chr21:19036599:M	TTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,64,255	1/2:0,9,5:15:255,78,36,140,0,99	0/1:17,5,0:25:76,0,255,78,255,255
-chr21	19043910	chr21:19043910:M	ACACATACACACACACACACACACACACACACACACACACACACA	<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,12,0:13:193,21,0,196,38,222	1/2:0,7,4:12:210,76,44,97,0,82	0/1:10,9,0:19:99,0,116,129,169,255
-chr21	19066979	chr21:19066979:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,17:34:237,0,184	0/1:9,4:14:31,0,127	0/0:29,1:30:0,70,255
-chr21	19069366	chr21:19069366:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,6:24:255,160,106,255,0,255	1/2:0,6,13:23:255,255,255,114,0,115	0/1:20,12,0:33:123,0,255,215,255,255
-chr21	19071741	chr21:19071741:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:16:255,44,0	1/1:0,18:20:255,58,0	1/1:0,31:31:255,91,0
-chr21	19078947	chr21:19078947:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,4:14:255,71,77,239,0,223	0/1:1,5,0:8:144,0,23,137,26,155	0/2:2,0,4:7:61,70,162,0,33,15
-chr21	19081923	chr21:19081923:M	TTTATTTTATTTTATTTTATTTT	<3.6>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,33:33:255,97,0	1/1:0,36:36:255,106,0
-chr21	19082010	chr21:19082010:M	ACCTCCACCTCC	<1.8>	.	.	Motif=ACCTCC	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:17,21:38:255,0,255	0/0:27,0:27:0,81,255
-chr21	19094380	chr21:19094380:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAA	<47>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:53,9,0	0/1:1,2:5:39,0,3	1/1:0,6:9:122,23,0
-chr21	19095797	chr21:19095797:M	AAGGAAGGAAGGAAGAAAAGAAGGAAGGAAGGAA	<9.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:19,19:38:232,0,231	1/1:0,25:26:255,73,0	0/1:12,13:27:166,0,147
-chr21	19099925	chr21:19099925:M	AAAAAAAAATAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,2:35:0,68,255	0/1:20,22:43:239,0,216	0/0:54,0:54:0,158,255
-chr21	19102891	chr21:19102891:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:25,11:37:95,0,255	0/0:47,2:49:0,108,255
-chr21	19109672	chr21:19109672:M	TATCTATCTCTACTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<13>,<14>,<14.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,8,6,0:14:255,114,75,153,0,114,255,99,152,255	0/2:11,0,9,0:20:202,161,255,0,255,255,170,255,198,255	1/3:0,13,0,8:21:255,149,177,255,152,255,255,0,239,255
-chr21	19111472	chr21:19111472:M	AAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,9:15:255,161,125,70,0,36	1/2:0,7,2:10:223,31,4,116,0,100	2/2:0,1,8:11:248,157,132,30,12,0
-chr21	19111549	chr21:19111549:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3:14:12,0,158	0/0:28,2:31:0,56,255	0/1:10,13:25:165,0,113
-chr21	19118331	chr21:19118331:M	ACTCACTCACT	<2.5>	.	.	Motif=ACTC	GT:AD:DP:PL	1/1:0,52:52:255,144,0	1/1:0,40:40:255,111,0	1/1:0,39:39:255,108,0
-chr21	19121532	chr21:19121532:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:9:177,0,2	1/1:0,10:15:255,35,0	1/1:0,9:10:255,30,0
-chr21	19127600	chr21:19127600:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:82,9,0	0/1:3,4:12:101,0,66	0/1:6,2:11:26,0,151
-chr21	19128588	chr21:19128588:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0,0:17:0,50,255,50,255,255	0/1:1,3,0:6:47,0,3,50,4,88	0/2:3,0,9:12:120,153,255,0,44,17
-chr21	19135957	chr21:19135957:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:6:119,85,93,12,17,0	0/0:1,0,0:2:0,6,45,3,34,30	1/2:0,3,5:8:219,83,61,51,0,27
-chr21	19153216	chr21:19153216:M	ATATATATATATATA	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,29:32:255,87,0	1/1:0,27:29:255,81,0	1/1:0,41:41:255,123,0
-chr21	19153952	chr21:19153952:M	ATATATATATACATATATATATATATATATATATATAT	<24>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,3:12:255,39,12,255,0,247	1/2:0,0,2:3:37,26,23,12,0,6	1/1:0,3,0:4:107,12,0,107,12,107
-chr21	19154977	chr21:19154977:M	TTTTATTTTTTTTTTATTTTTTATTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:29:255,86,0	1/1:0,14:15:236,30,0	1/1:2,27:29:255,49,0
-chr21	19156588	chr21:19156588:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:120,15,0	0/1:4,2:8:65,0,104	1/1:0,2:4:76,10,0
-chr21	19157299	chr21:19157299:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,38:38:255,112,0	1/1:0,42:42:255,124,0
-chr21	19158838	chr21:19158838:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,38:39:255,96,0	0/1:14,16:30:201,0,164	1/1:1,38:39:255,96,0
-chr21	19161732	chr21:19161732:M	TTTTTTTTCTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:16:255,38,0	0/1:7,4:13:63,0,165	1/1:0,8:10:216,27,0
-chr21	19165953	chr21:19165953:M	TATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<9>,<13>,<14>	.	.	Motif=TATC	GT:AD:DP:PL	2/3:0,0,6,12:18:255,255,255,197,230,179,115,115,0,63	1/3:0,7,0,10:17:255,180,255,255,180,255,196,0,196,166	2/3:0,0,10,11:21:255,255,255,175,205,145,186,187,0,127
-chr21	19173721	chr21:19173721:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12,0:14:192,21,0,226,36,255	0/1:9,6,0:21:64,0,103,107,124,255	1/2:2,6,5:18:131,66,121,72,0,133
-chr21	19175582	chr21:19175582:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<10>,<10.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,10,0:13:211,32,0,64,14,33	1/1:0,2,0:3:39,6,0,12,2,6	1/2:0,12,9:24:255,62,1,71,0,10
-chr21	19175740	chr21:19175740:M	AAAAAAACAAAAACAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,15:15:255,44,0	0/1:11,8:19:94,0,151
-chr21	19183991	chr21:19183991:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,10:10:177,177,177,29,29,0	2/2:1,1,5:7:79,57,79,3,3,0	1/2:0,4,9:13:230,130,118,68,0,31
-chr21	19186895	chr21:19186895:M	ACACACACACACACACACACACACACACACACACACA	<17.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,7,11:18:255,255,255,194,195,144,105,124,0,72	1/2:0,16,15,0:33:255,249,255,255,0,255,255,250,255,255	0/3:11,0,2,14:27:255,255,255,210,255,255,0,196,160,249
-chr21	19189969	chr21:19189969:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:54,9,0	.	0/0:2,0:3:0,8,45
-chr21	19195354	chr21:19195354:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:3:78,9,0,49,8,41	0/1:7,2,0:9:23,0,150,25,91,93	2/2:1,3,11:18:136,79,135,1,7,0
-chr21	19195365	chr21:19195365:M	ATATATATATATATATATA	<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,13,7:24:255,114,46,240,0,181	0/1:7,1,0:13:1,0,197,21,203,221	0/2:13,0,6:25:111,75,255,0,255,255
-chr21	19200118	chr21:19200118:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25,0:25:255,74,0,255,74,255	1/1:0,6,0:6:106,18,0,106,18,106	1/2:0,9,7:16:255,126,80,137,0,116
-chr21	19200131	chr21:19200131:M	CACACACAAACACACACACACACACACACACACACACACACACACACA	<18>,<19>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,14,16:32:255,255,173,248,0,161	1/1:0,9,0:9:255,27,0,169,26,144	1/2:0,8,10:19:255,162,108,138,0,86
-chr21	19203510	chr21:19203510:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,74,0	0/1:20,25:46:255,0,221	0/1:26,20:48:237,0,255
-chr21	19204326	chr21:19204326:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,37:44:255,72,0	0/1:17,21:39:255,0,195	1/1:1,43:44:255,111,0
-chr21	19214306	chr21:19214306:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:74,9,0	1/1:0,2:3:49,6,0	1/1:0,6:7:162,21,0
-chr21	19216242	chr21:19216242:M	ACACACACACACACACACACAAACACACACACACACATACACACACACA	<27.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/0:19,0:20:0,60,255	0/1:10,11:23:249,0,211
-chr21	19223273	chr21:19223273:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,1:40:0,99,255	0/0:32,0:33:0,97,255	0/1:18,13:32:143,0,243
-chr21	19225155	chr21:19225155:M	TTTTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33,1:36:255,107,0,255,87,255	1/2:0,18,23:43:255,255,255,255,0,191	1/2:0,21,20:44:255,255,255,255,0,255
-chr21	19227216	chr21:19227216:M	AAAAAAAAAAACAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0,0:30:0,89,255,90,255,255	0/1:21,24,0:46:255,0,235,255,255,255	0/2:15,0,11:28:255,255,255,0,255,255
-chr21	19232571	chr21:19232571:M	TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCT	<22.5>,<23.5>,<24.5>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,1,11,9:21:255,255,255,123,106,61,161,105,0,100	2/3:0,4,11,10:25:255,255,255,135,78,61,190,64,0,120	1/2:0,16,9,0:27:255,123,45,228,0,153,255,97,224,255
-chr21	19232605	chr21:19232605:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTG	<14>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0:33:255,99,0,255,99,255	1/2:0,3,9:17:255,255,252,122,0,90	0/1:6,12,0:25:255,0,137,255,184,255
-chr21	19233751	chr21:19233751:M	TTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.2>,<9.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,12,9:21:255,163,103,217,0,158	1/1:0,22,0:23:255,69,0,255,68,255
-chr21	19242184	chr21:19242184:M	TTTTTTTTTTTTTCTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:31:0,62,255	0/1:18,17:37:255,0,255	0/0:26,0:28:0,83,255
-chr21	19248635	chr21:19248635:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:40:0,118,255	0/1:18,10:28:96,0,238	0/0:44,0:45:0,132,255
-chr21	19253451	chr21:19253451:M	TATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,52:53:255,159,0	1/1:0,16:19:255,48,0	1/1:0,16:16:255,48,0
-chr21	19254775	chr21:19254775:M	TATATATATATATATATATA	<8>,<9>,<12>	.	.	Motif=TA	GT:AD:DP:PL	3/3:0,0,0,27:27:255,255,255,255,255,255,81,81,81,0	2/3:0,0,16,5:21:255,255,255,138,141,94,255,255,0,255	1/3:0,14,0,12:28:255,255,255,255,255,255,255,0,255,255
-chr21	19260501	chr21:19260501:M	CACACACACACACACACACACACACACACACACACACACACACACACA	<13>,<25>	.	.	Motif=CA	GT:AD:DP:PL	0/2:10,0,3:13:14,52,255,0,172,135	0/2:8,0,8:17:86,132,255,0,132,86	0/1:5,18,0:23:255,0,77,255,84,255
-chr21	19261662	chr21:19261662:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:79,9,0	1/1:0,4:5:108,13,0	1/1:0,2:2:54,6,0
-chr21	19266518	chr21:19266518:M	ATATATATATATATATATGTATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:31,0:36:0,93,255	0/1:10,13:24:255,0,186	0/0:34,0:35:0,102,255
-chr21	19266542	chr21:19266542:M	ACACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:22,27:49:255,0,237	0/1:16,11:27:103,0,186	0/0:42,1:44:0,111,255
-chr21	19267499	chr21:19267499:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<7.5>,<12.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,29,0:29:255,255,255,86,87,0,255,255,87,255	1/2:0,16,16,0:33:255,255,255,255,0,255,255,255,255,255	2/3:1,0,7,19:27:255,255,255,255,255,255,112,200,0,137
-chr21	19271087	chr21:19271087:M	AAAATAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0,0:30:0,89,255,86,255,255	0/2:15,0,17:32:255,255,255,0,255,255	0/1:8,22,0:32:255,0,162,255,217,255
-chr21	19271733	chr21:19271733:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:0,17:18:255,52,0	1/1:0,12:12:220,35,0
-chr21	19274180	chr21:19274180:M	TTTTTCTTTCTTTCTTTTCTTTTTTTTTTTCTTTTCTTTCTTTTTTTTATTTTTTT	<59>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:13:0,39,255	0/1:4,7:12:193,0,83	0/1:9,7:17:177,0,213
-chr21	19276693	chr21:19276693:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:50,0:52:0,153,255	0/1:13,23:37:255,0,132	0/0:56,2:58:0,134,255
-chr21	19278413	chr21:19278413:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/1:23,11:35:102,0,255	0/1:12,19:32:255,0,126
-chr21	19283563	chr21:19283563:M	ACACACATACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:35,0:35:0,98,255	0/0:29,0:29:0,81,255	0/1:10,22:36:206,0,52
-chr21	19288908	chr21:19288908:M	ATACATACATACATACATACATACATACATACATACATACATACATAC	<11>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:11,11:23:140,0,130	0/0:16,0:17:0,50,255
-chr21	19292919	chr21:19292919:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:2,21:24:255,33,0	0/1:12,11:24:121,0,149	0/1:12,14:27:172,0,144
-chr21	19295856	chr21:19295856:M	ACAACAACAACAACAACAACAACAACAACGACAACAA	<13.3>	.	.	Motif=ACA	GT:AD:DP:PL	1/1:0,38:38:255,112,0	0/1:16,15:31:180,0,198	0/1:10,13:24:173,0,125
-chr21	19299309	chr21:19299309:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:32:0,93,255	0/0:26,1:28:0,64,255	0/1:34,13:47:91,0,255
-chr21	19309904	chr21:19309904:M	TTTTTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,4,5:11:143,51,55,24,0,60	0/1:3,2,0:5:19,0,35,28,49,101	0/2:7,0,2:10:26,33,127,0,117,169
-chr21	19324621	chr21:19324621:M	ACACAAACACACACACACACATACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,33:33:255,99,0	0/1:11,10:23:216,0,233
-chr21	19328514	chr21:19328514:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:0,0,62	0/0:0,0:1:0,3,11	0/1:2,3:5:36,0,19
-chr21	19329744	chr21:19329744:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,28:28:255,82,0	0/1:17,18:35:230,0,209
-chr21	19331481	chr21:19331481:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,3:8:115,35,31,43,0,58	0/1:4,5,0:9:59,0,42,71,68,173	0/2:4,0,4:9:84,68,123,0,75,95
-chr21	19341575	chr21:19341575:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:21,0,102	0/1:2,7:9:92,0,7	0/1:10,7:19:67,0,138
-chr21	19345531	chr21:19345531:M	TATATATATATATATATATATA	<8>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,35,0:36:255,105,0,255,105,255	1/2:0,9,5:15:255,88,110,244,0,229	1/2:0,21,10:32:255,191,217,255,0,255
-chr21	19349676	chr21:19349676:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,6:11:104,116,184,5,13,0	1/2:1,5,5:13:136,70,112,82,0,130	0/0:7,1,0:12:0,6,107,22,109,136
-chr21	19367520	chr21:19367520:M	ATATATATATATATATATATATA	<12.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:9,3,6:18:135,63,180,0,119,228	1/2:0,5,1:7:112,28,10,74,0,68	0/0:26,0,0:26:0,77,255,78,255,255
-chr21	19372104	chr21:19372104:M	AAAAAAAAAAAGAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17:38:206,0,255	0/0:31,2:33:0,62,255	0/1:15,18:33:232,0,176
-chr21	19372547	chr21:19372547:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:29:161,0,204	0/0:32,6:39:0,7,255	1/1:0,41:43:255,126,0
-chr21	19375706	chr21:19375706:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:55,0,3	0/1:2,1:5:24,0,19	.
-chr21	19400235	chr21:19400235:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:20:0,55,255	0/1:12,6:22:49,0,162	0/0:17,1:21:0,41,255
-chr21	19403322	chr21:19403322:M	ATCTATGTATCTATGTATCTATGTATCTATCTATGTATCTATCTATCTATCTATCTAT	<12.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:8,8:16:159,0,166	0/0:16,0:16:0,48,255	1/1:0,32:32:255,96,0
-chr21	19408203	chr21:19408203:M	ACACACACACACACACACACACACACACACACACA	<12.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,26,0:45:255,0,255,255,255,255	0/2:14,0,11:25:118,189,255,0,242,171	1/1:0,32,0:33:255,99,0,255,99,255
-chr21	19408262	chr21:19408262:M	TACATATACATATACATATACATATACATATA	<4.3>	.	.	Motif=TACATA	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:9,11:20:141,0,105	0/0:26,0:26:0,77,255
-chr21	19409697	chr21:19409697:M	ATATATATATATACATAAATTTATTTTATATATAATGGTATTATATTATATATAT	<28.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:7,5:12:55,0,89	0/0:13,0:14:0,41,248
-chr21	19439900	chr21:19439900:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,1:4:74,16,16,30,0,22	0/2:2,0,3:6:67,49,106,0,55,42	1/2:0,4,1:5:130,16,2,65,0,50
-chr21	19455460	chr21:19455460:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,2:19:0,19,255	0/1:11,11:24:139,0,122	0/0:24,3:28:0,28,255
-chr21	19459035	chr21:19459035:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:25:205,0,100	1/1:0,14:15:254,44,0	0/0:29,4:34:0,28,255
-chr21	19459199	chr21:19459199:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:20:0,54,255	0/1:10,8:21:155,0,213	0/0:17,0:18:0,54,255
-chr21	19460879	chr21:19460879:M	ATATATATATATATATATATATATA	<9.5>,<10.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:1,7,2,12:22:255,164,255,205,158,202,156,0,76,121	1/2:0,16,17,1:35:255,243,155,238,0,141,255,183,222,255	3/3:3,1,1,25:31:255,255,255,255,255,255,35,61,60,0
-chr21	19461588	chr21:19461588:M	CACACACACCACACACACATACACACACACACACACA	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,10:22:221,0,211	0/1:7,6:13:126,0,156	0/0:34,0:34:0,102,255
-chr21	19461624	chr21:19461624:M	AGAGAGAGAAAGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:7,12:19:239,0,117	0/1:7,12:20:234,0,115	0/0:38,0:38:0,114,255
-chr21	19463455	chr21:19463455:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,47:49:255,127,0	1/1:0,30:34:255,99,0	0/1:13,24:40:255,0,118
-chr21	19463993	chr21:19463993:M	ATATATATATATATATATATATATATATA	<15.5>,<20.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,6,8:16:255,210,205,72,0,144	0/2:0,0,1:3:21,27,45,0,21,22	1/1:1,15,0:16:203,31,0,249,48,255
-chr21	19466458	chr21:19466458:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,5:5:88,88,88,15,15,0	0/0:2,0,0:2:0,6,56,6,39,34	1/2:0,3,6:9:160,86,77,51,0,26
-chr21	19472165	chr21:19472165:M	CACACACACACA	<4>,<5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,8:19:255,126,93,201,0,148	1/1:0,12,0:12:255,36,0,243,35,211	2/2:0,0,24:24:255,255,255,71,71,0
-chr21	19472176	chr21:19472176:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<19.5>,<20.5>,<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:2,8,4,1,0:16:255,0,31,37,9,67,163,35,90,192,255,48,93,219,255	2/4:0,0,4,0,3:9:179,103,112,51,63,45,72,67,32,58,82,44,0,43,69	1/3:0,9,2,7,0:18:255,157,109,166,58,113,209,0,81,157,255,83,146,205,255
-chr21	19473227	chr21:19473227:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,13:28:255,255,255,241,0,255	1/2:0,15,10:25:255,255,212,255,0,255	1/1:0,45,0:45:255,133,0,255,135,255
-chr21	19486176	chr21:19486176:M	GTGTGTTTGTGTGTGTGTGTGTGTGTGTTGTGTATGTGT	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,24:43:255,0,235	0/0:20,0:20:0,59,255	0/1:18,11:30:116,0,254
-chr21	19488881	chr21:19488881:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:22:255,63,0,255,63,255	1/2:0,7,10:20:255,247,228,201,0,171	0/1:11,8,0:22:178,0,255,211,255,255
-chr21	19491193	chr21:19491193:M	TCTCTCTCTCTCTCTCTCTTCTC	<10.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,19:19:255,56,0	0/1:19,14:34:173,0,255
-chr21	19497486	chr21:19497486:M	AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0:12:0,34,183	0/1:7,13:24:160,0,41	0/0:14,1:17:0,30,210
-chr21	19501510	chr21:19501510:M	ATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,2:42:0,77,255	0/1:22,17:41:255,0,255	0/0:46,0:46:0,138,255
-chr21	19503371	chr21:19503371:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:1,27:28:255,64,0	1/1:0,34:34:255,100,0
-chr21	19503569	chr21:19503569:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,26,26:53:255,255,255,255,0,255	1/2:0,23,18:42:255,255,255,255,0,255	0/1:18,21,0:39:255,0,223,255,255,255
-chr21	19504846	chr21:19504846:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,3,4:7:106,125,189,71,106,96,53,80,0,66	1/2:0,21,7,0:31:255,148,164,255,0,255,255,221,255,255	0/3:3,0,1,9:13:122,158,255,140,255,255,0,63,27,27
-chr21	19509772	chr21:19509772:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,15:37:255,0,255	0/1:15,13:33:255,0,255	0/0:35,0:36:0,108,255
-chr21	19518955	chr21:19518955:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,28:29:255,87,0	0/1:11,15:29:255,0,221	0/1:16,16:33:255,0,255
-chr21	19524780	chr21:19524780:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,0,9:19:194,145,255,0,255,238	1/2:0,1,4:6:124,63,49,16,0,1	0/1:8,7,0:15:142,0,178,111,204,255
-chr21	19531621	chr21:19531621:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:17:201,0,4	1/1:3,23:27:255,27,0	0/0:21,1:23:0,50,255
-chr21	19533104	chr21:19533104:M	ACACACACACATACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,21:28:255,0,49	1/1:1,22:23:255,50,0	0/1:13,11:25:134,0,167
-chr21	19536416	chr21:19536416:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,2:47:0,102,255	0/0:35,2:39:0,79,255	0/1:22,18:41:205,0,255
-chr21	19536947	chr21:19536947:M	TATATATATATATATAT	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:28,0:31:0,61,179	0/0:8,0:8:0,16,46	0/1:7,12:22:27,0,10
-chr21	19543970	chr21:19543970:M	GTTTTTTGTTTGTTTTGTTTTTTTTTTGTTTTGTTTGTTTGTTTGTTT	<12.2>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:6,9:15:142,0,80	1/1:1,22:23:255,48,0	0/0:11,1:12:0,15,208
-chr21	19545826	chr21:19545826:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:4,0,103	1/1:0,6:7:94,17,0	0/0:9,0:10:0,29,156
-chr21	19546365	chr21:19546365:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	.	0/1:2,3:5:33,0,17	0/0:1,0:2:0,6,29
-chr21	19549187	chr21:19549187:M	TCTCTCTCTCTCTCTCTCTCTC	<7>,<9>,<10>	.	.	Motif=TC	GT:AD:DP:PL	0/2:13,7,12,1:33:238,99,255,0,142,223,157,142,146,247	1/2:0,20,7,0:30:255,145,77,255,0,255,255,84,255,255	0/3:7,0,1,10:20:86,127,255,77,255,230,0,91,75,44
-chr21	19549208	chr21:19549208:M	CACACACACACACACACACACACACACACACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,18:21:255,56,0	1/1:0,27:35:255,94,0	0/1:8,7:18:55,0,79
-chr21	19550359	chr21:19550359:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,13:29:154,0,210	0/1:19,13:32:133,0,238	0/0:16,2:18:0,17,252
-chr21	19551108	chr21:19551108:M	ATAGATAGGTAGGTAGGTAAATAGATTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<15.5>,<17.5>	.	.	Motif=ATAG	GT:AD:DP:PL	0/0:13,0,0:13:0,38,250,38,250,250	0/1:9,7,0:16:79,0,116,124,137,255	0/2:11,0,6:17:62,110,255,0,174,155
-chr21	19553279	chr21:19553279:M	ACACACACACATACACACACATACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:32:255,93,0	0/1:22,11:33:195,0,255	1/1:0,22:24:255,66,0
-chr21	19556560	chr21:19556560:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,42:44:255,93,0	0/1:20,11:32:101,0,255	1/1:0,29:29:255,85,0
-chr21	19563350	chr21:19563350:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:26:255,62,0	0/1:13,18:33:225,0,138	1/1:2,27:29:255,49,0
-chr21	19572358	chr21:19572358:M	CTCTCTCTCTTTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTC	<33.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:13,0:14:0,42,255	0/1:5,3:10:75,0,103	0/0:13,0:13:0,39,255
-chr21	19572418	chr21:19572418:M	CACACACACACACACACACACACACACACACACACACACACACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,2,9:11:254,122,92,33,5,0	2/2:0,0,8:8:192,124,102,24,22,0	1/2:0,7,3:11:242,40,19,90,0,60
-chr21	19574283	chr21:19574283:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/1:7,4:11:37,0,91	0/0:22,0:22:0,65,255
-chr21	19575396	chr21:19575396:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:20,9:29:70,0,255	0/0:38,0:39:0,114,255
-chr21	19577467	chr21:19577467:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:22:255,46,0	0/1:3,9:21:150,0,6	1/1:3,24:29:255,21,0
-chr21	19579446	chr21:19579446:M	TATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:22,0:24:0,71,255	0/1:5,7:12:160,0,104	0/0:14,0:14:0,42,255
-chr21	19582403	chr21:19582403:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:13,22:38:255,0,135	0/0:25,1:27:0,61,255
-chr21	19595617	chr21:19595617:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAGAAAAGAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,10:24:59,0,19	0/0:18,1:24:0,39,168	0/1:18,7:36:12,0,112
-chr21	19630647	chr21:19630647:M	GAGAGAGAGAGAGA	<9>	.	.	Motif=GA	GT:AD:DP:PL	0/1:12,16:28:255,0,251	0/1:8,16:25:255,0,149	0/1:14,14:28:255,0,255
-chr21	19632074	chr21:19632074:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<11>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:11,11:22:148,0,148	0/0:13,0:13:0,38,236	0/1:15,9:24:98,0,212
-chr21	19634033	chr21:19634033:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:200,0,171	0/1:15,9:24:87,0,192	0/1:23,15:38:159,0,255
-chr21	19634255	chr21:19634255:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,0,15:30:198,242,255,0,255,189	0/1:13,22,1:36:255,0,255,255,213,255	0/2:13,2,17:32:242,230,255,0,201,148
-chr21	19640047	chr21:19640047:M	TTTATGTATTTATGTATGTATGTATATATGTATGTATGTATGTATTTATTTATTTATTTATTTATTTATTT	<18.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:2,6:8:91,0,14	0/0:2,0:2:0,6,36	0/1:7,3:10:26,0,100
-chr21	19642719	chr21:19642719:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:119,20,0	0/1:1,2:5:24,0,9	0/0:2,0:2:0,6,35
-chr21	19661574	chr21:19661574:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:2,29:31:255,56,0	1/1:1,33:36:255,87,0
-chr21	19664497	chr21:19664497:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,9:22:106,0,135	0/1:14,11:27:109,0,180	0/0:21,0:23:0,65,255
-chr21	19672721	chr21:19672721:M	AAAAAAAAAAAACAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,9:32:74,0,255	0/1:16,14:32:153,0,216	0/0:36,1:38:0,93,255
-chr21	19672790	chr21:19672790:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,2:38:0,75,255	0/0:34,1:37:0,91,255	0/1:11,7:18:74,0,146
-chr21	19674852	chr21:19674852:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:29:255,0,122	0/0:33,2:35:0,67,255	0/1:23,24:47:255,0,255
-chr21	19689224	chr21:19689224:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<13.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,18:33:255,255,235,200,0,170	0/1:13,15,0:30:174,0,162,219,242,255	1/2:0,16,16:32:255,255,194,242,0,194
-chr21	19690717	chr21:19690717:M	TCCTTTCCTTT	<1.6>	.	.	Motif=TCCTT	GT:AD:DP:PL	0/0:44,0:45:0,124,255	0/0:44,0:44:0,132,255	0/1:18,26:45:255,0,255
-chr21	19692886	chr21:19692886:M	TTTTGTTTTTTGTTTTGTTTTTGTTTTTGTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,99,0	0/1:15,16:31:255,0,255	1/1:0,28:28:255,84,0
-chr21	19701141	chr21:19701141:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,3,1:4:111,108,106,17,17,5,51,51,0,39	1/1:0,1,0,0:1:31,3,0,30,3,29,31,3,29,31	1/3:0,3,0,3:8:170,79,67,127,46,114,90,0,77,80
-chr21	19702654	chr21:19702654:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:11:147,15,0	0/1:5,10:17:118,0,46	0/1:2,7:11:111,0,2
-chr21	19703633	chr21:19703633:M	ACACACACACACACACACACACAACATGCACACACACACACACA	<21>,<23>,<27>	.	.	Motif=AC	GT:AD:DP:PL	2/3:1,0,22,11:34:255,255,255,255,255,237,255,255,0,255	0/3:13,0,0,7:21:155,193,255,193,255,255,0,228,228,255	1/2:0,14,12,0:27:255,215,255,253,0,255,255,255,255,255
-chr21	19716793	chr21:19716793:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:23:0,50,255	0/0:21,1:22:0,47,255	0/1:20,16:37:185,0,245
-chr21	19732112	chr21:19732112:M	TATAGTATATATATATATGTGTATATGTCTATATATATATATATATATA	<23.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,7:17:80,0,136	0/1:4,1:5:3,0,55	0/1:9,10:19:126,0,107
-chr21	19737378	chr21:19737378:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,13,7:20:255,255,255,124,125,66,195,231,0,174	1/3:0,25,2,3:32:255,105,56,255,39,255,255,0,255,255	2/2:0,0,19,2:21:255,255,255,61,63,0,255,255,27,255
-chr21	19753579	chr21:19753579:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,10:30:255,186,101,255,0,255	1/2:1,17,11:30:255,188,122,237,0,227	2/2:1,3,32:36:255,255,255,70,39,0
-chr21	19758802	chr21:19758802:M	ACACACACACACACACACGCACACACACACAATACACACA	<19>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,12,0:22:166,0,128,226,164,255	0/1:14,17,0:31:216,0,162,255,213,255	0/2:17,1,18:36:232,255,255,0,251,223
-chr21	19761215	chr21:19761215:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,20:44:255,0,255	1/1:0,42:43:255,126,0	0/0:49,0:49:0,145,255
-chr21	19761608	chr21:19761608:M	TGTGTGTGTGTATGTGTGTGTGTGTATGTGTGTGTGTGTGTGTATGTGTGTGTG	<28>,<29>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,7,16:24:255,255,200,98,0,50	2/2:0,2,15:17:255,254,208,45,17,0	1/2:0,11,3:14:219,48,8,148,0,139
-chr21	19767479	chr21:19767479:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,19:39:239,0,248	1/1:1,23:25:255,55,0	0/0:31,0:31:0,91,255
-chr21	19772465	chr21:19772465:M	AAACAAACAAACAAACAAACAAACAAAAAACA	<9>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:22,12:34:118,0,255	0/0:27,0:27:0,80,255
-chr21	19773283	chr21:19773283:M	TATATATATATATATATATACACACATATATATACACATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	.	.	1/1:0,4:4:47,11,0
-chr21	19773353	chr21:19773353:M	TATATATATATATATATATATATATATATATATATATATATATAT	<11.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:1,0,0:5:0,6,52,6,52,52	0/0:0,0,0:1:0,3,22,3,22,22	1/2:0,10,4:16:255,48,18,255,0,255
-chr21	19774104	chr21:19774104:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:0,43:45:255,131,0	1/1:0,45:46:255,135,0
-chr21	19775100	chr21:19775100:M	CACACACACACACACACACACACACACACACACACACA	<18>,<20>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/3:1,12,2,7:25:255,167,161,255,139,255,167,0,255,255	3/3:0,0,0,27:29:255,255,255,255,255,255,87,87,87,0	1/2:0,14,13,0:28:255,202,255,227,0,255,255,255,255,255
-chr21	19789077	chr21:19789077:M	ACCCCCACCCCC	<2.2>	.	.	Motif=ACCCCC	GT:AD:DP:PL	0/1:19,13:32:239,0,255	0/0:24,0:24:0,72,255	0/1:20,9:29:145,0,255
-chr21	19790838	chr21:19790838:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:144,15,0	.	1/1:0,1:4:31,4,0
-chr21	19801794	chr21:19801794:M	TTTGTTTGCTTGTTTGTTTGTTTGTTTTTTG	<8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:18,11:29:207,0,255	1/1:0,35:35:255,105,0	0/0:30,0:30:0,90,255
-chr21	19804190	chr21:19804190:M	TGTGTGTGTGTGTGTGTG	<8>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,7:21:28,0,113	0/1:5,6:11:42,0,30	0/0:35,0:36:0,99,255
-chr21	19804207	chr21:19804207:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<15>,<16>	.	.	Motif=GA	GT:AD:DP:PL	0/2:15,2,17:34:255,208,255,0,255,255	1/2:0,5,16:21:255,219,158,70,0,9	0/1:16,12,0:31:221,0,255,171,255,255
-chr21	19804942	chr21:19804942:M	TGTTTTTTTTGTTGTTTGTTTTTTTGTTTTTTTTTTGTTTTGTTTTGTTTTG	<9.2>,<10.8>,<11>	.	.	Motif=TGTTT	GT:AD:DP:PL	1/2:0,9,9,1:19:255,239,216,255,0,242,255,140,254,255	1/1:0,14,0,0:14:255,42,0,255,42,255,255,42,255,255	2/3:0,0,4,5:9:251,252,254,90,90,64,70,71,0,45
-chr21	19806519	chr21:19806519:M	AAAAAAAAAAAAA	<10>,<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,25,1,23:49:255,255,255,255,255,255,255,0,255,255	1/1:0,49,1,0:50:255,150,0,255,129,255,255,147,255,255	2/3:0,0,19,14:33:255,255,255,222,255,165,255,255,0,255
-chr21	19807245	chr21:19807245:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:26:135,151,255,0,234,180	2/2:1,5,24:30:255,255,255,70,1,0	0/1:10,9,3:26:226,0,228,138,139,255
-chr21	19816728	chr21:19816728:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,17,23:41:255,255,255,255,0,214	1/1:0,34,0:34:255,100,0,255,100,255	2/2:0,1,41:43:255,255,255,126,108,0
-chr21	19821060	chr21:19821060:M	TGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,11:24:182,0,203	0/0:10,0:10:0,30,223	1/1:0,27:28:255,81,0
-chr21	19821070	chr21:19821070:M	TATATATATATATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:4,14:22:255,0,95	0/0:6,0:8:0,24,186	1/1:0,26:29:255,70,0
-chr21	19823974	chr21:19823974:M	TTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,2,4:19:59,30,255,0,255,255	1/2:0,3,9:12:251,131,99,44,0,10	0/0:30,0,0:33:0,98,255,98,255,255
-chr21	19829448	chr21:19829448:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,0:51:0,150,255	0/0:43,0:43:0,126,255	0/1:19,25:44:255,0,218
-chr21	19832180	chr21:19832180:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:44:0,111,255	0/0:35,3:38:0,58,255	0/1:23,23:47:255,0,255
-chr21	19832679	chr21:19832679:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/0:30,0:30:0,88,255	0/1:26,23:49:255,0,255
-chr21	19836593	chr21:19836593:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:17:255,30,0	1/1:0,28:29:255,85,0	0/1:16,15:31:183,0,201
-chr21	19846516	chr21:19846516:M	CTTTTCTTTTCTTTTTTTTTTTTCCTTTT	<6>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:26,0:26:0,77,255	0/1:10,7:17:97,0,161
-chr21	19846696	chr21:19846696:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,1:7:0,2,91	0/0:10,0:11:0,32,179	0/1:10,7:18:71,0,133
-chr21	19857142	chr21:19857142:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:92,0,101	0/0:16,1:18:0,36,255	1/1:1,9:10:138,12,0
-chr21	19861089	chr21:19861089:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:255,0,255	1/1:0,22:23:255,69,0	0/0:36,0:37:0,111,255
-chr21	19867626	chr21:19867626:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/1:24,29:53:255,0,255	1/1:0,44:45:255,132,0	0/1:17,20:37:255,0,211
-chr21	19868263	chr21:19868263:M	CTCTCTGTCTCTCTCTCTCTCTCTCTCTC	<11.5>,<12.5>	.	.	Motif=CT	GT:AD:DP:PL	0/2:10,1,14:29:255,206,255,0,255,234	2/2:0,2,22:24:255,255,255,72,38,0	0/1:18,13,0:32:255,0,255,204,255,255
-chr21	19868291	chr21:19868291:M	CACACACACACACACACACACAC	<12.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:18,6,6:32:93,91,242,0,148,255	1/2:0,11,11:25:255,255,255,125,0,255	0/2:17,0,0:27:72,88,224,0,190,255
-chr21	19872748	chr21:19872748:M	AATAAATAAATAAATAAATAAATAAATAAATAAAT	<7.8>,<10.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:18,13,0:31:162,0,255,250,255,255	1/1:0,32,0:32:255,94,0,255,96,255	0/2:10,0,11:21:255,255,255,0,186,231
-chr21	19884356	chr21:19884356:M	GTGTGTGTGTGTGTGTGTCTGTGTGTCTGTGTCTGTGTGTCTTGTGTATGTGTG	<28>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,9:20:111,0,149	1/1:0,21:21:255,62,0	0/1:14,4:18:21,0,205
-chr21	19885166	chr21:19885166:M	AAAAAAAAAAAATAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:45,0:45:0,132,255	0/1:21,9:30:77,0,255
-chr21	19892061	chr21:19892061:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,8:19:93,0,150	1/1:1,19:20:255,41,0	0/1:10,9:20:116,0,124
-chr21	19898883	chr21:19898883:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	<10>,<11>	.	.	Motif=TC	GT:AD:DP:PL	0/1:7,11,0:19:255,0,153,193,179,255	1/1:0,21,0:23:255,68,0,255,64,255	0/2:11,1,5:17:97,69,255,0,255,255
-chr21	19907271	chr21:19907271:M	AAAAAAAAAAAAAAAAAAAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:84,15,0	.	0/1:1,2:3:24,0,8
-chr21	19908336	chr21:19908336:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:3,22:29:255,31,0	1/1:3,36:42:255,68,0
-chr21	19913097	chr21:19913097:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:24:203,0,94	1/1:0,26:28:255,81,0	0/0:26,4:31:0,19,255
-chr21	19923167	chr21:19923167:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,11:28:131,0,242	0/0:8,0:8:0,24,144	1/1:0,19:19:255,56,0
-chr21	19923189	chr21:19923189:M	ATATATATATTTTATATATAATTATATATTAATGATATTAATATATATATATATATATAT	<29>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:9:172,27,0	1/1:0,2:2:35,6,0	1/1:0,7:7:130,21,0
-chr21	19927431	chr21:19927431:M	AAAGAAAGAAAAGAAAGAAAGA	<4.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:23,9:32:12,0,163	0/0:27,0:27:0,71,255	0/1:14,5:19:3,0,99
-chr21	19927503	chr21:19927503:M	GAAAGGAAGAAAGAAAAGACAAGAAAGAAAGACAAGAAA	<10>	.	.	Motif=GAAA	GT:AD:DP:PL	0/0:25,0:25:0,37,95	0/0:32,0:34:0,49,125	0/1:16,14:34:5,0,21
-chr21	19927539	chr21:19927539:M	AAAATAAAAAAAGAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:30,0:30:0,88,255	0/1:13,11:24:135,0,172
-chr21	19930365	chr21:19930365:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:29:173,0,191	1/1:1,35:42:255,103,0	0/1:12,27:43:255,0,91
-chr21	19932510	chr21:19932510:M	TGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/0:25,0:26:0,68,255	0/1:25,14:42:255,0,255
-chr21	19932524	chr21:19932524:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,16:21:210,33,0	1/1:4,20:25:210,20,0	1/1:4,18:24:198,16,0
-chr21	19945535	chr21:19945535:M	TGTTTGTTTGT	<1.8>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:38,0:38:0,111,255	0/0:34,0:34:0,99,255	0/1:18,18:36:192,0,193
-chr21	19954852	chr21:19954852:M	TTTATTTTATTTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<12.5>,<12.8>	.	.	Motif=TTTA	GT:AD:DP:PL	2/2:0,0,18:18:255,255,255,53,54,0	2/2:0,0,7:7:128,138,152,21,21,0	1/2:0,9,9:18:255,154,141,189,0,141
-chr21	19955308	chr21:19955308:M	ATATATATATGTATTTATGTATACATATATATATTTATGTATACATACATATGTATTTATGTGTATATATAT	<2.5>	.	.	Motif=ATAT	GT:AD:DP:PL	0/1:7,12:22:255,0,102	1/1:1,7:8:255,1,0	0/1:10,8:18:255,0,175
-chr21	19970267	chr21:19970267:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<10>,<13>,<14>	.	.	Motif=CCTT	GT:AD:DP:PL	0/2:15,0,6,0:21:51,112,255,0,255,220,96,255,255,255	0/3:6,0,0,12:18:255,255,255,208,255,255,0,158,104,121	1/2:0,9,13,0:23:255,235,255,243,0,209,255,231,244,255
-chr21	19970328	chr21:19970328:M	TTCTTTTCTTTTTTTTTTTTTTTTTTCT	<5.4>	.	.	Motif=TTCTT	GT:AD:DP:PL	1/1:0,4:5:73,14,0	1/1:0,2:3:43,9,0	1/1:0,5:5:75,14,0
-chr21	19972118	chr21:19972118:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:113,15,0	1/1:0,6:6:180,18,0	1/1:1,6:11:203,3,0
-chr21	19976356	chr21:19976356:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGGAAAAGAAAAAGAGAAAAAGAAAAAAAA	<54>,<55>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,2:13:0,33,255,2,197,162	0/2:7,0,3:10:23,44,211,0,117,90	0/1:5,4,0:9:96,0,113,70,86,132
-chr21	19977966	chr21:19977966:M	AAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,20:28:255,255,255,103,0,29	1/2:0,7,17:25:255,255,218,119,0,48	0/2:5,2,11:19:255,155,255,0,93,85
-chr21	19983891	chr21:19983891:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	<10.8>,<11.8>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:12,8,7:27:97,0,175,21,61,72	1/2:2,8,7:17:159,35,44,59,0,36	0/2:14,0,9:23:31,72,255,0,140,81
-chr21	19983947	chr21:19983947:M	CATACATACATACATACATA	<6>,<7>	.	.	Motif=CATA	GT:AD:DP:PL	1/2:0,18,24:49:255,213,159,100,0,132	0/1:12,19,0:33:134,0,74,176,162,255	1/2:3,14,19:36:255,190,129,99,0,102
-chr21	19985279	chr21:19985279:M	TGTGTGTGTGTGTGTGTGTGCGCATGTGGTGTGTGTCTATGTGTGTGTGT	<24>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,19:19:255,56,0	1/1:0,21:22:255,64,0
-chr21	19986791	chr21:19986791:M	TTTTTTTTGTTTTTTTTTTT	<21>,<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,4,12:16:255,255,255,190,190,144,65,64,0,17	3/3:0,0,1,24:25:255,255,255,255,255,255,75,75,57,0	1/2:1,18,8,0:27:255,184,138,255,0,255,255,123,255,255
-chr21	19990678	chr21:19990678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,43:45:255,96,0	1/1:2,31:33:255,62,0	1/1:1,39:41:255,92,0
-chr21	19992034	chr21:19992034:M	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<12.2>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:13,8:21:92,0,189	0/1:3,0:5:7,0,40	0/1:12,8:20:91,0,167
-chr21	20008399	chr21:20008399:M	CACACACACACACACACACACACACAC	<15.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:3,20,0:24:255,0,10,255,77,255	0/1:2,15,0:20:255,0,1,255,58,255	1/2:1,13,16:33:255,255,255,255,0,255
-chr21	20012563	chr21:20012563:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:0,23:23:255,67,0	1/1:1,34:36:255,88,0
-chr21	20018873	chr21:20018873:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,14:25:194,0,112	1/1:0,29:32:255,93,0	0/1:5,13:19:188,0,35
-chr21	20034153	chr21:20034153:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:22:135,0,136	0/0:22,2:25:0,38,255	0/1:5,6:14:70,0,78
-chr21	20034579	chr21:20034579:M	TATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTCTATCT	<13>,<19.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,8,5:13:255,95,107,208,0,194	1/1:0,17,0:17:255,51,0,255,51,255	1/2:0,8,6:14:255,111,132,210,0,192
-chr21	20039938	chr21:20039938:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,79,0	1/1:1,30:31:255,73,0	1/1:2,28:30:255,52,0
-chr21	20044416	chr21:20044416:M	TTTTTTTTTTTTTT	<15>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,13,1,3:19:255,72,46,247,62,255,230,0,227,255	1/1:1,23,1,0:25:255,55,0,255,56,255,255,75,255,255	2/3:0,2,12,7:21:255,255,255,180,149,142,255,179,0,255
-chr21	20047228	chr21:20047228:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,14:31:176,0,196	0/0:31,2:35:0,67,255	0/1:17,19:38:236,0,200
-chr21	20047917	chr21:20047917:M	ACAACAACAACAACAACAACAA	<6.3>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:14,23:37:255,0,162	0/0:35,0:36:0,97,255	0/1:20,22:42:255,0,253
-chr21	20052105	chr21:20052105:M	TTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6,0:26:107,0,255,115,255,255	1/2:0,5,3:9:244,52,26,95,0,71	0/1:16,3,0:20:43,0,255,53,255,255
-chr21	20052179	chr21:20052179:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13:26:176,0,147	1/1:2,22:24:255,35,0	0/1:17,11:30:131,0,222
-chr21	20056199	chr21:20056199:M	GTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<8.8>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:1,25:26:255,58,0	1/1:0,24:24:255,71,0
-chr21	20060660	chr21:20060660:M	AAAAGAAAAGAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,30:31:255,91,0	1/1:1,23:24:255,52,0
-chr21	20069438	chr21:20069438:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:1,34:35:255,85,0	1/1:0,38:38:255,112,0
-chr21	20075680	chr21:20075680:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:2,26:28:255,47,0	1/1:3,27:31:255,37,0
-chr21	20083115	chr21:20083115:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:21:0,62,255	0/1:14,10:25:100,0,180	0/1:17,11:30:109,0,235
-chr21	20089392	chr21:20089392:M	AAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,60,0	1/1:0,11:14:255,41,0	1/1:0,15:17:255,51,0
-chr21	20105937	chr21:20105937:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,7:9:216,121,97,26,0,1	1/2:0,4,2:7:173,34,13,78,0,60	1/2:0,4,5:9:239,86,60,69,0,43
-chr21	20106411	chr21:20106411:M	TCATCATTATCATTATCAATCATCATCA	<11.3>	.	.	Motif=TCA	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,24:24:255,72,0	1/1:0,28:28:255,84,0
-chr21	20110850	chr21:20110850:M	TGTTTGTTTGTTTGTTTGTTT	<6.2>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,35:35:255,103,0	1/1:0,36:36:255,106,0
-chr21	20111612	chr21:20111612:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,19,5:26:255,95,24,255,0,255	1/2:0,10,10:20:255,167,109,167,0,110	2/2:0,1,20:22:255,255,255,62,44,0
-chr21	20115343	chr21:20115343:M	TTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:37:255,110,0	1/1:0,35:37:255,110,0	1/1:0,27:28:255,84,0
-chr21	20116311	chr21:20116311:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,35:37:255,105,0	1/1:0,47:50:255,146,0
-chr21	20119173	chr21:20119173:M	TTTTTTTTTTTTTTTATTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:2,21:23:255,33,0	1/1:1,21:26:255,57,0
-chr21	20127279	chr21:20127279:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,33:33:255,99,0	1/1:0,23:24:255,72,0
-chr21	20129453	chr21:20129453:M	TTCTTCTTCTTC	<3>	.	.	Motif=TTC	GT:AD:DP:PL	1/1:0,50:50:255,148,0	1/1:0,34:34:255,100,0	1/1:0,40:40:255,118,0
-chr21	20133811	chr21:20133811:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,21:25:255,54,0	1/1:1,16:19:255,38,0	1/1:1,25:28:255,64,0
-chr21	20134855	chr21:20134855:M	ACACGACACACACACACGCACACACACACACACACACACA	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,27:28:255,81,0	1/1:0,23:26:255,72,0
-chr21	20141171	chr21:20141171:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:221,24,0	0/1:1,4:6:91,0,36	1/1:0,4:4:110,12,0
-chr21	20142639	chr21:20142639:M	TTATTATTATTATTATTATTATTATTATTATTACTATTATT	<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10:10:190,30,0	1/1:0,6:7:117,20,0	1/1:0,11:11:204,32,0
-chr21	20154733	chr21:20154733:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:13:179,19,0	0/1:3,14:19:195,0,6	1/1:2,22:26:255,40,0
-chr21	20155732	chr21:20155732:M	CCCCCCCCCCCCC	<14>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:2,22:24:255,36,0	1/1:2,19:22:255,29,0
-chr21	20161968	chr21:20161968:M	TATATATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,28:33:255,78,0	1/1:0,19:21:255,62,0	1/1:1,35:37:255,91,0
-chr21	20162432	chr21:20162432:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:67,12,0	1/1:0,0:2:13,3,0	0/1:1,2:3:24,0,8
-chr21	20169966	chr21:20169966:M	ACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:2,29:31:255,57,0	1/1:0,22:22:255,64,0
-chr21	20173559	chr21:20173559:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,7:10:191,106,97,13,0,18	1/2:0,3,9:12:255,151,118,43,0,16	2/2:0,0,10:10:255,203,176,30,29,0
-chr21	20192660	chr21:20192660:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,20:22:255,65,0	1/1:0,32:38:255,102,0
-chr21	20197845	chr21:20197845:M	ACACAGACACACACACACACACACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,45,0	1/1:0,18:21:255,62,0	1/1:0,26:26:255,78,0
-chr21	20199490	chr21:20199490:M	TTTTTTTTTTTAATGTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,23:23:255,69,0	1/1:0,20:20:255,60,0
-chr21	20204340	chr21:20204340:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:3,46:50:255,94,0	1/1:3,38:43:255,71,0
-chr21	20216880	chr21:20216880:M	AGAGGAGAGAGAAAAAGAAGAGAGAAGAAAGAGGAGAGAGA	<6>	.	.	Motif=AG	GT:AD:DP:PL	0/1:23,5:28:35,0,255	0/1:26,9:35:127,0,255	0/0:33,4:37:0,13,255
-chr21	20222867	chr21:20222867:M	TTTTTCTTTTCTTTTTTTTTTTCTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:139,12,0	1/1:0,10:10:166,29,0	1/1:0,12:12:205,35,0
-chr21	20229545	chr21:20229545:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<12.6>,<13.6>,<14.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/3:0,7,0,4:11:226,110,89,190,76,179,133,0,132,179	2/3:0,0,4,4:8:219,180,168,72,71,49,72,61,0,49	1/2:0,6,5,0:11:231,93,61,95,0,80,204,79,111,243
-chr21	20230494	chr21:20230494:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:3,10,3,0:16:134,7,47,127,0,254,171,59,255,255	1/3:0,11,2,5:19:255,129,117,237,49,255,184,0,255,255	0/2:2,0,6,2:10:95,118,204,0,29,5,51,101,0,97
-chr21	20244101	chr21:20244101:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6,2:10:91,0,4,49,1,98	1/2:0,5,7:13:255,125,89,65,0,41	1/2:0,9,4:13:222,64,27,119,0,107
-chr21	20254488	chr21:20254488:M	AAAAAAGAAAAAAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAAAAAAGAAAAAA	<57>,<58>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,11:17:160,178,255,0,112,64	0/1:10,8,0:18:173,0,231,140,176,255	1/2:0,5,8:13:253,126,111,91,0,55
-chr21	20256071	chr21:20256071:M	ACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,9,0:18:255,156,104,150,0,99,255,156,150,255	1/3:1,9,0,6:17:255,148,154,255,180,255,232,0,148,236	2/2:0,0,21,0:21:255,255,255,63,61,0,255,255,63,255
-chr21	20262640	chr21:20262640:M	TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT	<14.3>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:7,0:7:0,21,124	0/1:3,5:8:68,0,31
-chr21	20274542	chr21:20274542:M	GGAAGGAGGGAAGGAAGGACGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	<18.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,6:6:110,18,0	1/1:0,5:5:87,15,0	.
-chr21	20274922	chr21:20274922:M	ACACACACACACACACACACACACACACATACACA	<14.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:15,0,19:36:255,255,255,0,255,249	0/2:21,0,13:36:196,255,255,0,255,255	0/1:20,21,0:44:255,0,255,255,255,255
-chr21	20280929	chr21:20280929:M	TATATATATATATAAAAATGTCTATATATATATATATA	<20>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,17:33:245,0,185	0/1:6,4:10:42,0,77	0/0:18,0:18:0,53,255
-chr21	20286018	chr21:20286018:M	TTTTTTTTTTTTTTTTTCTTTTT	<21>,<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:2,0,17,0:19:255,255,255,19,55,0,255,255,51,255	2/2:0,2,20,0:22:255,255,255,64,30,0,255,255,65,255	1/3:1,8,2,5:16:255,66,119,177,101,210,199,0,104,220
-chr21	20291667	chr21:20291667:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,0,1	0/0:0,0:4:0,4,16	1/1:0,3:3:89,9,0
-chr21	20293211	chr21:20293211:M	ACACACACACACACACACACACAC	<16>,<17>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,9:23:194,151,255,0,255,255	0/1:13,8,0:22:174,0,255,144,255,255	1/2:0,13,12:25:255,211,140,229,0,159
-chr21	20296069	chr21:20296069:M	AAAAAAAAAAAAAAGAAAGAAAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,7,8:21:255,172,185,80,0,189	1/2:1,14,8:26:255,209,172,228,0,255	1/2:0,16,13:29:255,255,255,255,0,255
-chr21	20300407	chr21:20300407:M	ATATATATATATATATATATATATATATA	<6.5>,<8>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,9:18:255,143,96,132,0,82	1/2:0,7,4:12:255,62,32,112,0,81	1/1:0,19,0:24:255,69,0,255,43,255
-chr21	20301970	chr21:20301970:M	AAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:14:218,0,22	0/1:2,10:15:239,0,23	0/1:2,13:16:255,0,18
-chr21	20305495	chr21:20305495:M	TTATTATTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:18,25:43:255,0,222	0/1:17,22:39:255,0,194	0/1:18,23:41:255,0,217
-chr21	20308330	chr21:20308330:M	ACACACACACACACACACACACACACACA	<13.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,21:21:255,255,255,62,63,0	0/2:15,2,6:23:39,70,255,0,188,223	1/2:1,16,7:25:255,110,135,255,0,255
-chr21	20308357	chr21:20308357:M	CATGCGTGCACGCATGCATGCA	<6.5>	.	.	Motif=CATG	GT:AD:DP:PL	1/1:0,23:24:255,68,0	1/1:0,18:18:255,53,0	0/1:19,11:32:106,0,255
-chr21	20315482	chr21:20315482:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:41:255,118,0	1/1:0,30:32:255,93,0	0/1:15,12:27:143,0,198
-chr21	20318169	chr21:20318169:M	TATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,1:12:2,0,224	0/1:8,6:16:130,0,161	0/0:37,0:39:0,116,255
-chr21	20318188	chr21:20318188:M	ATACACACACACACACATACATACATACATACATA	<9.2>,<10.2>,<10.8>	.	.	Motif=ATAC	GT:AD:DP:PL	1/3:0,3,0,19:22:255,255,255,190,164,148,26,0,35,4	1/3:0,8,1,9:20:241,173,150,120,69,143,57,0,107,133	0/2:6,0,18,9:33:255,255,255,0,49,38,77,116,34,138
-chr21	20324165	chr21:20324165:M	TTTTTTCTTTTTTCTTCTCTTTTTTTTTTTTTT	<32>,<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8,0:16:99,0,99,144,145,255	0/1:14,9,0:24:97,0,172,163,239,255	1/2:0,12,10:23:255,255,224,210,0,255
-chr21	20326468	chr21:20326468:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:8:17,0,52	0/0:7,0:9:0,24,128	0/1:7,3:10:22,0,89
-chr21	20336857	chr21:20336857:M	ACACACACACACACGTACACACACACACACACACACACACACACACACACACA	<21.5>,<24.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,9,0,9:18:255,159,255,255,159,255,255,0,255,242	1/2:0,10,7,0:18:255,213,201,255,0,255,255,118,255,255	2/3:0,0,8,6:14:255,255,255,87,104,63,139,140,0,98
-chr21	20340932	chr21:20340932:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,14:32:188,0,178	0/1:13,18:33:240,0,132	0/1:23,14:44:171,0,255
-chr21	20344582	chr21:20344582:M	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTAT	<6.6>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,20:20:255,60,0	1/1:0,23:25:255,75,0
-chr21	20345787	chr21:20345787:M	ACACACACACACACACACACACACACACA	<13.5>,<18.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/4:0,14,0,0,4:19:255,114,70,255,112,255,255,72,255,255,255,0,255,255,255	1/3:0,11,0,8,0:21:255,231,196,255,127,255,198,0,255,255,255,139,255,255,255	2/4:0,0,7,1,6:15:255,255,255,170,170,140,225,225,91,184,209,209,0,117,184
-chr21	20351847	chr21:20351847:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,4,13:32:148,163,255,0,163,229	2/2:1,0,27:29:255,255,255,67,84,0	0/1:16,14,0:30:167,0,203,251,245,255
-chr21	20353330	chr21:20353330:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:20:0,38,255	0/0:23,0:24:0,70,255	0/1:13,11:25:126,0,153
-chr21	20354998	chr21:20354998:M	CACACACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,16:31:224,0,200	1/1:0,36:36:255,106,0	0/0:40,0:40:0,118,255
-chr21	20360344	chr21:20360344:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:16:0,44,255	0/0:21,2:27:0,41,255	0/1:14,7:24:53,0,207
-chr21	20365894	chr21:20365894:M	TTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,17,0:18:255,35,0,255,54,255	1/1:0,16,0:21:255,57,0,255,59,255	1/2:2,10,8:22:255,169,191,133,0,255
-chr21	20367038	chr21:20367038:M	TTTTCTTTTCTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:44,2:47:0,101,255	0/0:37,1:38:0,94,255	0/1:18,19:37:241,0,220
-chr21	20367366	chr21:20367366:M	TTTTCTTTTTTCTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,35:35:255,103,0	1/1:0,39:39:255,115,0
-chr21	20371170	chr21:20371170:M	AAAAAAAAAAAAAAAAAA	<14>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27,0:28:255,81,0,255,81,255	1/1:0,32,0:33:255,99,0,255,99,255	1/2:0,17,11:31:255,193,228,255,0,255
-chr21	20374052	chr21:20374052:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:1,30:31:255,73,0	0/1:18,10:30:97,0,253
-chr21	20374840	chr21:20374840:M	AAAAAAAAAAAAAGAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,12:19:162,0,54	0/1:6,8:16:99,0,65	1/1:0,17:17:255,50,0
-chr21	20377229	chr21:20377229:M	ATATATATATATATATATATATATATATATATCATATATAGATATGGTATATATA	<28.5>,<30.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,6,0:11:81,0,34,99,64,255	0/0:0,0,0:1:0,3,12,3,13,14	2/2:0,0,3:5:118,105,100,15,12,0
-chr21	20377292	chr21:20377292:M	TCTATCTATCTATCCATCTATCTATCTATCTATCTATC	<8.5>	.	.	Motif=TCTA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,19:19:255,56,0	1/1:0,17:17:255,50,0
-chr21	20381138	chr21:20381138:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAACAAATA	<12.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,14:14:255,41,0	1/1:0,9:9:163,26,0	0/1:17,10:27:107,0,238
-chr21	20381646	chr21:20381646:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:219,30,0	1/1:1,7:10:103,1,0	1/1:1,9:11:153,14,0
-chr21	20391009	chr21:20391009:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:28:0,63,255	0/0:20,0:23:0,67,255	0/1:18,15:34:181,0,224
-chr21	20393082	chr21:20393082:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:24:255,45,0	1/1:2,19:22:255,11,0	0/1:21,8:30:138,0,255
-chr21	20396019	chr21:20396019:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,11:40:171,0,255	0/1:19,28:47:255,0,255	0/0:32,0:34:0,99,255
-chr21	20398635	chr21:20398635:M	ATATATATATATATATATA	<8.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,27:28:255,255,255,82,84,0	2/2:1,0,21:22:255,255,255,47,63,0	1/2:2,19,15:36:255,238,255,255,0,255
-chr21	20402917	chr21:20402917:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,49:51:255,113,0	1/1:4,37:41:255,49,0	1/1:1,43:44:255,111,0
-chr21	20405735	chr21:20405735:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,49:50:255,129,0	1/1:0,52:52:255,154,0
-chr21	20423055	chr21:20423055:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:34:255,98,0	1/1:4,23:29:255,16,0	1/1:1,22:26:255,58,0
-chr21	20430762	chr21:20430762:M	TATATATATACATATATATATATACACATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,10:22:39,0,243	0/0:0,0:1:0,0,0	0/1:5,3:8:8,0,103
-chr21	20430814	chr21:20430814:M	TATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,10:11:88,2,0	0/0:1,0:1:0,3,28	0/1:1,3:4:24,0,16
-chr21	20430941	chr21:20430941:M	ATATATAGTCATATATATGTAACATATATACTCATATATATAACATATATAGTCATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,10:26:47,0,255	0/0:8,0:9:0,24,213	0/0:16,3:20:0,21,255
-chr21	20435496	chr21:20435496:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:52,0,2	0/1:0,2:3:23,0,3	0/1:1,2:3:24,0,8
-chr21	20440482	chr21:20440482:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,22:35:255,0,133	1/1:0,30:32:255,93,0	0/1:15,16:31:192,0,175
-chr21	20441660	chr21:20441660:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,15:19:217,0,1	0/1:10,10:22:116,0,116	0/1:8,8:17:101,0,91
-chr21	20445754	chr21:20445754:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,12:22:158,0,96	0/1:15,9:25:79,0,190	0/1:11,9:22:103,0,137
-chr21	20449355	chr21:20449355:M	ACACACACACACACACACACACACACACACACACACATACAC	<17>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,9,15:24:255,208,139,127,0,56	1/2:0,12,10:25:255,137,64,194,0,125	1/2:0,7,20:28:255,255,198,90,0,18
-chr21	20449540	chr21:20449540:M	ATATATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,35:38:255,109,0	1/1:0,20:21:255,61,0	1/1:1,37:41:255,99,0
-chr21	20449926	chr21:20449926:M	TATATATACATATATATGTGTATATATATATATATGTGTATATATATATATATATATATATATATATA	<24>,<27>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,10:19:255,255,248,160,0,117	1/1:0,4,0:5:186,15,0,142,15,129	1/2:0,1,1:4:91,23,14,57,0,51
-chr21	20450745	chr21:20450745:M	AGAAAAAAAAAAAGAAAAAGAA	<3.5>	.	.	Motif=AGAAAA	GT:AD:DP:PL	1/1:1,30:32:255,71,0	1/1:0,28:28:255,84,0	1/1:0,39:39:255,116,0
-chr21	20454899	chr21:20454899:M	TTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:16:255,47,0	1/1:0,9:17:255,47,0	1/1:0,11:12:255,36,0
-chr21	20460618	chr21:20460618:M	ACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,2:4:97,12,0	1/1:0,3:5:116,14,0	1/1:0,9:11:255,33,0
-chr21	20460632	chr21:20460632:M	AGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAAGAGA	<22.5>,<23.5>,<24.5>	.	.	Motif=AG	GT:AD:DP:PL	1/3:0,4,2,4:11:253,97,69,89,28,60,107,0,39,85	2/3:0,1,4,4:10:243,144,120,62,47,33,61,27,0,33	1/2:0,8,5,0:18:255,55,14,126,0,101,255,51,144,255
-chr21	20465604	chr21:20465604:M	ATATATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,28:28:255,84,0	1/1:0,38:39:255,117,0	1/1:0,36:36:255,108,0
-chr21	20466933	chr21:20466933:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:32:255,94,0	0/1:17,17:34:202,0,201	1/1:0,30:30:255,88,0
-chr21	20468084	chr21:20468084:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:7,0,22	0/1:1,4:5:46,0,1	0/1:1,3:4:35,0,4
-chr21	20475867	chr21:20475867:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:16:240,0,84	0/1:3,9:14:200,0,48	0/1:2,5:10:119,0,35
-chr21	20476756	chr21:20476756:M	TTATTATTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,38:38:255,113,0	1/1:0,33:33:255,97,0	1/1:0,39:40:255,118,0
-chr21	20481093	chr21:20481093:M	TTTTTTTTTATTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,40:40:255,120,0	1/1:0,43:43:255,129,0
-chr21	20482033	chr21:20482033:M	TGTGTGTGTGTGTGTGTGT	<12.5>,<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,26,19,0:46:255,255,255,255,0,255,255,255,255,255	1/3:0,17,1,15:35:255,255,255,255,239,255,255,0,255,255	1/2:0,23,18,0:41:255,255,255,255,0,255,255,255,255,255
-chr21	20482533	chr21:20482533:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:2,25:28:255,48,0	0/1:10,10:23:121,0,112
-chr21	20487619	chr21:20487619:M	AAAAAAACAAAAACAAAAACAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,23:46:255,0,255	0/1:25,19:44:255,0,255	1/1:0,37:37:255,111,0
-chr21	20488919	chr21:20488919:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,28:33:255,41,0	1/1:0,41:42:255,123,0	1/1:0,42:43:255,127,0
-chr21	20489184	chr21:20489184:M	ATATATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,25:25:255,74,0	0/1:20,17:37:209,0,255
-chr21	20493740	chr21:20493740:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5:18:37,0,172	0/1:9,9:19:98,0,108	1/1:0,21:23:255,66,0
-chr21	20500999	chr21:20500999:M	TGTGGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,5:18:255,110,88,197,0,255	1/2:0,13,7:23:255,186,136,227,0,255	1/2:1,9,10:20:255,242,226,140,0,210
-chr21	20503564	chr21:20503564:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,21,17:38:255,255,211,255,0,255	1/2:1,15,17:33:255,238,219,247,0,171	1/2:2,22,15:39:255,200,185,255,0,255
-chr21	20508543	chr21:20508543:M	TTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTT	<7.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:16,16:32:255,0,255	0/1:14,12:26:246,0,255	0/1:15,7:22:123,0,255
-chr21	20512491	chr21:20512491:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,11:26:140,155,255,0,229,178	0/2:26,1,26:54:255,255,255,0,255,255	0/1:13,20,0:33:255,0,255,255,231,255
-chr21	20535561	chr21:20535561:M	TTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,13:19:255,0,32	0/1:4,12:18:255,0,62	1/1:0,16:20:255,53,0
-chr21	20539643	chr21:20539643:M	CACACACACACACACACACACACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,17:39:196,0,255	0/1:14,25:40:255,0,136	0/1:24,18:43:197,0,255
-chr21	20553094	chr21:20553094:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,13,0,12:26:255,216,255,255,255,255,255,0,244,255	2/3:1,0,11,15:27:255,255,255,241,255,255,171,189,0,238	1/3:2,14,0,12:29:255,175,255,255,255,255,255,0,251,255
-chr21	20554292	chr21:20554292:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,30:31:255,89,0	1/1:0,11:15:189,25,0	0/1:5,16:21:225,0,28
-chr21	20560947	chr21:20560947:M	AAAAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:32:193,0,203	0/0:26,1:28:0,64,255	0/0:33,0:33:0,97,255
-chr21	20563377	chr21:20563377:M	GTTTTTTTGTTTGTTTGTTTTTGTTTGTTTGTTTTTTGTTTGTTT	<7.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/1:15,11:26:221,0,255	0/0:21,0:21:0,63,255
-chr21	20568009	chr21:20568009:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:19:34,0,196	0/1:16,4:20:10,0,215	0/1:15,3:23:17,0,219
-chr21	20572427	chr21:20572427:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:39:0,69,255	0/1:31,13:46:110,0,255	0/0:31,2:33:0,61,255
-chr21	20577323	chr21:20577323:M	AAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/1:12,10:25:207,0,255	0/0:17,0:23:0,67,255
-chr21	20579932	chr21:20579932:M	ACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:15,9:24:183,0,255	0/0:35,0:35:0,105,255
-chr21	20581354	chr21:20581354:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:39:0,115,255	0/1:25,23:51:255,0,255	0/0:32,0:37:0,110,255
-chr21	20584235	chr21:20584235:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,7:20:255,87,77,193,0,155	1/2:0,4,9:16:246,126,108,86,0,48	1/2:2,10,6:18:255,53,74,137,0,122
-chr21	20587000	chr21:20587000:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,15:16:255,44,0	1/1:0,2:2:37,6,0	1/1:0,14:14:255,41,0
-chr21	20587092	chr21:20587092:M	ACACACACACACACACACACACACACACACACACAC	<15>,<16>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,3,3:7:157,49,31,49,0,31	1/1:0,5,0:6:151,16,0,95,15,80	1/2:0,0,4:6:125,64,47,21,0,7
-chr21	20587129	chr21:20587129:M	TATATATATATATATATATATA	<9>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,5,4:11:149,46,31,113,0,122	2/2:0,0,1:1:14,14,14,3,3,0	1/1:0,7,1:10:189,24,0,195,13,235
-chr21	20587199	chr21:20587199:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,10:25:92,0,158	1/1:1,12:13:171,22,0	0/1:13,9:22:80,0,144
-chr21	20587266	chr21:20587266:M	TATATATATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,10:20:255,0,110	0/0:5,0:6:0,15,153	0/1:3,10:15:255,0,60
-chr21	20587529	chr21:20587529:M	TATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,9:29:26,0,255	0/0:19,2:21:0,38,255	0/0:14,1:15:0,33,255
-chr21	20587560	chr21:20587560:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,10:20:131,0,112	1/1:0,10:10:177,29,0	0/1:9,6:15:65,0,120
-chr21	20587665	chr21:20587665:M	TATATATATATATATATATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:9:121,25,0	1/1:0,2:2:27,6,0	1/1:0,1:2:13,3,0
-chr21	20587710	chr21:20587710:M	GTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,2:6:19,0,57	0/0:5,0:5:0,15,88	1/1:0,5:5:88,15,0
-chr21	20587723	chr21:20587723:M	TATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,9:17:62,0,178	0/1:5,2:7:4,0,121	0/0:6,1:7:0,9,158
-chr21	20587746	chr21:20587746:M	GTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,2:2:83,6,0	1/1:0,1:3:71,9,0	1/1:0,5:5:209,15,0
-chr21	20587767	chr21:20587767:M	TATATATATATATATATATATATATATATATATGTATATGTATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:9:126,26,0	1/1:0,2:3:28,6,0	1/1:0,1:1:14,3,0
-chr21	20587849	chr21:20587849:M	TATATATAGATATATATATCTATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,9:19:54,0,221	0/1:6,2:8:0,0,142	0/0:6,1:7:0,9,155
-chr21	20587901	chr21:20587901:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,9:16:57,0,146	0/0:9,1:10:0,18,236	0/0:7,1:8:0,13,215
-chr21	20587923	chr21:20587923:M	TATAATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,9:14:69,0,100	0/0:7,1:8:0,12,184	0/0:7,0:7:0,21,199
-chr21	20587966	chr21:20587966:M	TATATATATATATATATATATATATATATATA	<13>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,1,9:12:189,101,92,89,0,65	2/2:0,0,1:1:14,14,14,3,3,0	1/1:0,3,0:4:117,12,0,118,12,120
-chr21	20587997	chr21:20587997:M	ACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,5:13:110,0,129	1/1:0,9:10:252,30,0	0/0:9,1:10:0,3,217
-chr21	20588087	chr21:20588087:M	TATATATATATATATATA	<16>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:9:133,133,133,26,26,0	2/2:0,0,1:1:15,15,15,3,3,0	1/1:0,3,0:4:99,6,0,100,9,103
-chr21	20588119	chr21:20588119:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,9:21:50,0,255	0/0:5,1:6:0,6,131	0/0:27,0:28:0,84,255
-chr21	20588145	chr21:20588145:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,9:22:47,0,255	0/0:6,1:7:0,9,159	0/0:32,0:32:0,96,255
-chr21	20588236	chr21:20588236:M	ATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,9:17:62,0,179	0/0:5,1:6:0,6,127	0/0:20,0:20:0,60,255
-chr21	20588446	chr21:20588446:M	TATATATACATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,6:18:20,0,255	0/0:15,1:16:0,36,255	0/0:21,0:21:0,63,255
-chr21	20588518	chr21:20588518:M	TATATATATATATATATATATA	<16>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,6:12:187,58,40,129,0,113	2/2:0,0,1:1:12,12,12,3,3,0	1/1:0,3,0:4:98,12,0,98,12,98
-chr21	20600172	chr21:20600172:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,16:24:233,0,39	1/1:0,16:17:255,49,0	0/1:9,20:29:255,0,73
-chr21	20600593	chr21:20600593:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,20:32:255,0,133	1/1:0,23:23:255,68,0	0/1:20,17:39:219,0,255
-chr21	20603452	chr21:20603452:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTCTTTTCTCTTCTTTT	<7.6>,<9.6>,<12.6>,<13.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/2:0,8,8,0,0:16:255,226,200,222,0,195,255,226,222,255,255,226,222,255,255	2/3:0,0,12,4,0:16:255,255,255,115,115,79,255,255,0,255,255,255,72,255,255	1/4:0,13,0,0,5:18:255,142,103,255,142,255,255,94,255,255,255,0,255,255,255
-chr21	20606508	chr21:20606508:M	GAGAGAGAGAGAGAGAGAGAGA	<12>	.	.	Motif=GA	GT:AD:DP:PL	0/0:35,0:37:0,106,255	0/1:11,8:20:85,0,148	0/1:19,18:37:225,0,243
-chr21	20616707	chr21:20616707:M	ATATACATATATGTATATGTATAATATGTATTTATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,1:19:0,3,255	0/1:10,5:16:182,0,227	0/1:15,4:19:127,0,255
-chr21	20633056	chr21:20633056:M	ACACACACACAAACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:44,0:44:0,122,255	0/1:24,25:49:173,0,160	0/0:28,0:28:0,78,255
-chr21	20637098	chr21:20637098:M	AATAATAATAATAATAAATAAATAAATAAATAATAAT	<14>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:24,0:25:0,75,255	0/1:8,7:15:143,0,170	0/0:17,0:18:0,54,255
-chr21	20641025	chr21:20641025:M	AAAAAAAAAAAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:58,6,0	0/1:2,1:4:31,0,45	0/1:2,4:6:95,0,42
-chr21	20656183	chr21:20656183:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:7:74,4,0	0/1:3,1:5:2,0,42	0/1:1,3:4:36,0,4
-chr21	20657799	chr21:20657799:M	ATATATATATATATATATATATATATATATAT	<14>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,4:11:95,0,45	0/1:3,2:6:42,0,40	1/1:1,5:10:110,4,0
-chr21	20660697	chr21:20660697:M	ATCAGTCAATCAATCAAT	<3.8>	.	.	Motif=ATCA	GT:AD:DP:PL	0/1:16,13:29:248,0,255	0/1:15,17:32:255,0,255	1/1:0,25:25:255,75,0
-chr21	20681652	chr21:20681652:M	TTTTTGTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:159,0,196	0/1:12,18:30:228,0,123	1/1:1,29:32:255,75,0
-chr21	20683532	chr21:20683532:M	AAAAAAAAAAAAAAAAAAAGAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:10,16,80,0,77,107	0/2:1,1,3:7:68,35,46,0,12,25	1/2:0,3,1:4:67,17,5,42,0,39
-chr21	20686872	chr21:20686872:M	ACACACACACACACACACACACACACACACACACACACACA	<22.5>,<23.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,3,0,3:8:128,56,73,101,81,128,51,0,60,87	1/2:0,1,4,0:7:133,56,42,16,0,21,133,62,38,155	1/3:0,1,0,5:8:176,148,144,148,132,147,27,0,24,23
-chr21	20694434	chr21:20694434:M	AAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:96,0,8	0/1:2,3:7:83,0,32	1/1:0,5:5:131,15,0
-chr21	20694494	chr21:20694494:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,13:34:51,0,137	0/1:16,18:34:103,0,82	0/1:13,21:34:137,0,51
-chr21	20700747	chr21:20700747:M	TATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,33:37:255,69,0	1/1:0,37:39:255,114,0	1/1:2,50:55:255,125,0
-chr21	20701603	chr21:20701603:M	CCCCCCACCCCCCCCACCCCCCCC	<27>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,3:3:80,9,0	0/1:4,2:6:33,0,82	0/1:5,2:7:32,0,107
-chr21	20701939	chr21:20701939:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:35:255,84,0	0/1:6,11:19:154,0,50	0/1:12,17:30:216,0,137
-chr21	20726922	chr21:20726922:M	AAAATAAAAAAAATA	<3.2>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:22,20:42:255,0,255	0/0:45,0:45:0,135,255	0/1:19,14:33:253,0,255
-chr21	20732932	chr21:20732932:M	AATAATAATAATAATAATAATAAT	<10>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:17,8:26:157,0,255	0/0:32,0:32:0,96,255	0/1:21,14:35:255,0,255
-chr21	20740961	chr21:20740961:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,21:42:255,0,255	1/1:0,33:33:255,97,0	0/0:36,2:40:0,80,255
-chr21	20741363	chr21:20741363:M	TGTTTGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	<7.8>,<8.8>	.	.	Motif=TGTT	GT:AD:DP:PL	1/2:0,13,21:34:255,255,255,249,0,153	1/1:0,42,0:42:255,126,0,255,124,255	2/2:0,0,31:31:255,255,255,92,92,0
-chr21	20742184	chr21:20742184:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:37:214,0,255	0/0:31,0:31:0,91,255	0/1:17,28:46:255,0,190
-chr21	20742455	chr21:20742455:M	ATATATATATTATATATATATATATATATAATATATATATATAT	<20>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:10:198,23,0	.	0/1:1,6:7:139,0,7
-chr21	20744350	chr21:20744350:M	TATATATATATTTTATATATATATATAAAGTATGTATATATA	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,11:18:123,0,57	.	0/0:9,0:9:0,26,138
-chr21	20747431	chr21:20747431:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,10:21:255,158,125,199,0,142	2/2:1,2,16:19:255,238,255,38,20,0	0/1:11,14,1:27:255,0,238,242,180,255
-chr21	20750918	chr21:20750918:M	ACACACACACACACACACACACACACACGCACACACACACACAC	<8>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,13:28:255,255,255,255,0,255	2/2:0,0,22:23:255,255,255,69,69,0	0/1:8,13,0:22:255,0,173,255,212,255
-chr21	20758029	chr21:20758029:M	ACACACACATACACACACACACACACACACACACACACACACAC	<21>,<23>,<26>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,2:7:131,145,190,55,56,41,89,136,0,133	2/2:1,0,6,0:7:86,105,176,3,18,0,106,183,21,197	1/3:1,8,0,6:17:255,149,137,255,164,255,141,0,255,255
-chr21	20758579	chr21:20758579:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:36:255,106,0	1/1:1,32:34:255,82,0	0/1:20,17:38:197,0,255
-chr21	20771559	chr21:20771559:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:18:77,0,151	0/0:23,1:25:0,56,255	0/1:15,13:29:150,0,196
-chr21	20772669	chr21:20772669:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,8,1:11:117,13,0,96,14,117	1/1:0,16,0:16:234,46,0,234,46,234	0/2:12,0,11:23:220,159,255,0,174,245
-chr21	20776876	chr21:20776876:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,14:27:255,219,180,235,0,160	2/2:1,1,26:28:255,255,255,64,64,0	0/1:11,17,0:28:255,0,236,255,195,255
-chr21	20787783	chr21:20787783:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,7:20:255,111,72,240,0,185	2/2:0,0,33:33:255,255,255,97,97,0	0/1:14,23,0:37:255,0,255,255,249,255
-chr21	20791347	chr21:20791347:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:30,16:46:175,0,255	0/0:41,0:41:0,121,255	0/1:22,32:54:255,0,255
-chr21	20793091	chr21:20793091:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,4:17:22,0,184	0/1:2,9:11:122,0,2	0/0:14,0:18:0,52,255
-chr21	20813660	chr21:20813660:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,5:39:0,24,255	0/1:28,7:36:26,0,255	0/1:16,16:34:205,0,186
-chr21	20815942	chr21:20815942:M	TGTTTTTGTTGTTGTTGTTGTTGTTTTTGTTTTTGTTTTTGTT	<6.7>	.	.	Motif=TGTTGT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,29:30:255,89,0	1/1:0,23:25:255,73,0
-chr21	20816929	chr21:20816929:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:8:120,36,31,43,0,59	2/2:0,0,2:3:82,59,51,9,9,0	1/2:1,2,2:6:50,7,20,2,0,33
-chr21	20818381	chr21:20818381:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,25:43:255,0,212	0/0:27,1:29:0,67,255	1/1:2,35:38:255,76,0
-chr21	20824260	chr21:20824260:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,57,0	1/1:0,20:24:255,63,0	0/1:17,10:29:201,0,255
-chr21	20826712	chr21:20826712:M	ATATATATATATATATATATATATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:18:255,8,0	0/1:0,0:3:1,0,12	1/1:0,5:7:161,20,0
-chr21	20833099	chr21:20833099:M	AACAACAACAACAACAACAACAACAACAACAACAACAACAA	<11.7>,<12.7>	.	.	Motif=AAC	GT:AD:DP:PL	2/2:0,1,21:22:255,255,255,65,46,0	2/2:0,1,27:28:255,255,255,82,64,0	1/2:0,13,9:22:255,144,105,241,0,180
-chr21	20837778	chr21:20837778:M	TTTTCTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,1:7:0,2,88	0/1:2,4:7:64,0,13	0/0:5,0:6:0,2,72
-chr21	20845702	chr21:20845702:M	TCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCT	<11.8>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:11,6:17:69,0,169	1/1:0,17:17:255,50,0	0/0:9,0:9:0,27,179
-chr21	20868827	chr21:20868827:M	CACACACACACACACACACAC	<9.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,17:31:233,0,176	1/1:1,41:42:255,106,0	0/0:53,1:54:0,141,255
-chr21	20872700	chr21:20872700:M	TTATTATTATTATTATTATTATTATTATTATTATTA	<14>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:13,10:24:205,0,255	0/0:7,0:7:0,21,192	1/1:0,13:13:255,39,0
-chr21	20874947	chr21:20874947:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,19:37:255,0,209	1/1:1,34:38:255,93,0	0/1:18,16:34:191,0,228
-chr21	20896785	chr21:20896785:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAGTGTGTGTGTGT	<12.5>,<14.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/3:6,1,0,9:16:95,115,255,137,255,255,0,70,92,49	2/3:0,0,3,3:10:90,100,137,35,73,64,58,66,0,58	0/1:6,4,0,0:10:72,0,130,88,142,227,89,89,176,162
-chr21	20899471	chr21:20899471:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGT	<21>,<23>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,10,0:26:255,141,220,210,0,255,255,255,255,255	1/3:0,4,0,4:8:165,111,99,172,107,204,65,0,103,94	2/2:1,0,13,0:15:205,246,255,24,42,0,246,255,45,255
-chr21	20899973	chr21:20899973:M	GTGTGTGGGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,13:29:165,0,222	0/0:35,0:35:0,103,255	1/1:0,46:46:255,136,0
-chr21	20902031	chr21:20902031:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:24:110,0,184	0/1:10,16:29:201,0,100	1/1:2,18:21:255,26,0
-chr21	20905429	chr21:20905429:M	TATATATATATATATATATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,6:17:64,0,157	0/0:2,0:2:0,6,36	1/1:0,10:10:187,30,0
-chr21	20906537	chr21:20906537:M	AAAAAAACAGAAAAAAAAAAAAAAAAAGAAAAAAA	<34>,<36>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,3:12:122,47,66,84,0,133	0/2:5,1,4:11:50,62,169,0,55,66	1/1:1,19,0:20:255,41,0,255,57,255
-chr21	20908692	chr21:20908692:M	AAAAAAAAAAAAA	<14>,<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,1,9,6:16:255,255,255,158,142,129,233,143,0,224	1/3:0,9,0,4:14:248,117,91,245,115,243,155,0,155,238	2/2:0,1,24,0:25:255,255,255,72,56,0,255,255,75,255
-chr21	20914534	chr21:20914534:M	AAAAAAAAAGAAAAAGAAAAAAAAA	<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16,0:30:215,0,177,255,255,255	0/2:16,0,15:31:255,255,255,0,255,255	1/1:0,27,0:27:255,80,0,255,80,255
-chr21	20918816	chr21:20918816:M	GAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA	<7.4>,<12.2>,<13.4>	.	.	Motif=GAAAA	GT:AD:DP:PL	2/3:0,0,6,2:8:218,218,218,54,54,34,159,159,0,150	1/2:0,9,4,0:14:255,109,79,253,0,241,255,105,253,255	3/3:0,0,0,10:10:255,255,255,255,255,255,30,30,30,0
-chr21	20926550	chr21:20926550:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,15,0:29:255,0,255,255,225,255	0/2:15,0,9:25:86,156,255,0,255,203	1/1:0,42,0:45:255,134,0,255,134,255
-chr21	20937991	chr21:20937991:M	ACACACGCACACACACACACACACACACACACGCACACAC	<17>,<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	2/3:1,0,14,13:28:255,255,255,226,245,163,205,255,0,189	1/2:0,19,8,0:28:255,141,227,255,0,255,255,141,255,255	3/3:0,0,0,23:23:255,255,255,255,255,255,69,69,68,0
-chr21	20945365	chr21:20945365:M	AATAATAATAAT	<3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:17,20:37:255,0,220	0/0:40,0:40:0,118,255	1/1:0,44:44:255,130,0
-chr21	20948462	chr21:20948462:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,11:23:236,0,208	0/0:19,0:20:0,57,255	1/1:0,26:29:255,83,0
-chr21	20955178	chr21:20955178:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,10:17:128,0,46	0/0:15,2:24:0,30,255	0/1:1,4:5:54,0,2
-chr21	20971844	chr21:20971844:M	AAAAAAAAACAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:24,11:39:208,0,255	0/0:37,0:38:0,114,255
-chr21	20972116	chr21:20972116:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,28:47:255,0,189	1/1:1,44:46:255,117,0	0/0:36,3:39:0,60,255
-chr21	20975051	chr21:20975051:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:7:0,21,125	0/1:6,5:12:60,0,67	0/0:7,0:7:0,21,122
-chr21	20975221	chr21:20975221:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:12,0,92	0/1:1,3:6:64,0,21	0/0:7,0:7:0,21,190
-chr21	20975464	chr21:20975464:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:129,15,0	1/1:0,2:3:73,9,0	.
-chr21	20976561	chr21:20976561:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,3:30:0,33,255	0/1:7,14:22:187,0,57	0/1:10,11:22:132,0,123
-chr21	20978900	chr21:20978900:M	TTTTTTTTATTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,20:27:255,0,51	0/1:12,9:22:104,0,147	0/0:22,0:23:0,67,255
-chr21	20981661	chr21:20981661:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,10,17:30:255,255,255,255,0,224	1/2:0,18,13:32:255,223,255,255,0,255	2/2:0,0,24:25:255,255,255,73,72,0
-chr21	20982238	chr21:20982238:M	TATATATATATATATATATATA	<20.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,3:7:108,36,24,73,0,64	.	1/1:0,4,0:4:119,12,0,119,12,119
-chr21	20984522	chr21:20984522:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:0,29:30:255,88,0	1/1:0,42:42:255,124,0
-chr21	20986545	chr21:20986545:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	0/1:3,3:7:31,0,32	1/1:0,0:1:11,3,0
-chr21	20992105	chr21:20992105:M	TTTAGTTTTATTTTTCTATTTTTTTTTTTTTTA	<5.3>	.	.	Motif=TTTATT	GT:AD:DP:PL	1/1:0,10:10:132,28,0	1/1:1,11:12:132,20,0	1/1:1,37:40:255,98,0
-chr21	20995361	chr21:20995361:M	CTCTCTCTCTCTCTCTTATCTTCCCTCTGTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTC	<29.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:11,7:18:42,0,95	0/1:10,3:13:2,0,92	0/0:14,3:17:0,9,144
-chr21	20995623	chr21:20995623:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:13:233,38,0	1/1:1,11:12:170,18,0	1/1:1,16:17:255,32,0
-chr21	20996106	chr21:20996106:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<20>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/4:0,7,0,0,5:12:255,141,123,255,144,255,255,144,255,255,202,0,197,202,187	1/2:0,9,13,0,0:25:255,255,255,255,0,207,255,255,254,255,255,255,255,255,255	3/4:0,0,0,7,3:10:181,203,255,202,255,255,82,85,85,63,121,198,193,0,189
-chr21	21009884	chr21:21009884:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,10,0:22:239,0,255,255,255,255	1/2:0,13,8:23:255,218,174,255,0,255	0/0:14,0,0:16:0,42,255,42,255,255
-chr21	21011155	chr21:21011155:M	TTTTTTTTTCTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,0:38:0,112,255	0/1:12,25:38:255,0,105	0/1:26,16:42:174,0,255
-chr21	21013782	chr21:21013782:M	AAAAAAAAAAAAAGAAAATAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0,0:30:0,90,255,87,255,255	0/2:7,0,11:20:255,193,255,0,190,152	0/1:8,16,0:26:255,0,167,255,214,255
-chr21	21014424	chr21:21014424:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:18:0,35,255	0/1:8,4:13:30,0,108	0/0:13,0:16:0,43,243
-chr21	21026626	chr21:21026626:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,62,0	0/1:23,13:39:130,0,255	0/1:12,11:23:120,0,137
-chr21	21026856	chr21:21026856:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:14:0,11,112	1/1:2,8:13:77,5,0	0/0:6,0:7:0,19,85
-chr21	21031810	chr21:21031810:M	ACACACACACACACACACACTCACACACAC	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	0/2:22,0,22:44:255,255,255,0,255,255	1/2:0,14,28:42:255,255,255,255,0,133	0/0:33,1,1:35:0,69,255,70,255,255
-chr21	21032929	chr21:21032929:M	TTTCTTTCTTTCTTTCTTT	<1.5>,<2.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,7,0:7:184,21,0,148,21,132	1/2:0,12,9:21:255,160,101,209,0,152	2/2:0,0,16:16:255,255,255,48,47,0
-chr21	21032945	chr21:21032945:M	TTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:9:174,128,116,58,0,127	.	1/2:0,2,3:7:124,79,67,57,0,107
-chr21	21043851	chr21:21043851:M	AAAAAAAAAAAAAAAAAGAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:164,29,0	0/1:2,10:14:135,0,3	1/1:2,18:20:255,24,0
-chr21	21044036	chr21:21044036:M	TGTGTGTGTGTGTGTG	<9>,<10>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,7:23:255,132,66,255,0,239	1/2:0,19,12:31:255,214,125,255,0,251	1/1:1,40,0:41:255,102,0,255,121,255
-chr21	21049014	chr21:21049014:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,2:11:255,36,4,163,0,132	1/1:0,10,0:11:255,30,0,203,32,185	1/2:0,5,5:11:255,97,68,88,0,57
-chr21	21049872	chr21:21049872:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,17:42:202,0,255	0/0:45,0:46:0,135,255	0/1:23,20:44:241,0,255
-chr21	21050137	chr21:21050137:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:41:224,0,255	0/0:38,2:40:0,83,255	0/1:18,16:36:181,0,226
-chr21	21051263	chr21:21051263:M	AGCTAGCTAGC	<1.8>	.	.	Motif=AGCT	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:21,21:42:255,0,255	1/1:0,52:52:255,154,0
-chr21	21052151	chr21:21052151:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,3:3:91,91,91,9,9,0	2/2:0,0,1:2:28,30,41,3,6,0	1/1:0,4,0:5:141,15,0,137,15,134
-chr21	21053945	chr21:21053945:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,58:59:255,155,0	1/1:0,43:43:255,127,0	1/1:0,48:48:255,142,0
-chr21	21056491	chr21:21056491:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<20>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,14,6,0:20:255,103,121,242,0,255,255,163,255,255	1/1:0,8,0,0:8:134,23,0,156,24,233,157,24,239,247	2/3:0,0,12,6:21:255,255,255,180,181,135,209,255,0,255
-chr21	21056528	chr21:21056528:M	GAGAGAGGGGGAGAGAGAGGAGAGAGAGAGAGAGTGAGAGAGAGAGATAGTGAGAGAGAGAGA	<30.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:2,8:10:80,2,0	1/1:0,8:8:104,22,0	0/0:9,0:9:0,25,118
-chr21	21058145	chr21:21058145:M	AAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:26:255,78,0	1/1:0,11:18:255,41,0	1/1:0,19:21:255,60,0
-chr21	21058670	chr21:21058670:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,27:30:255,52,0	0/1:13,14:31:171,0,153	1/1:4,34:39:255,35,0
-chr21	21063211	chr21:21063211:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,14:17:255,49,0	0/0:0,0:1:0,0,0
-chr21	21066418	chr21:21066418:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:20,16:36:183,0,255	0/0:33,0:34:0,100,255
-chr21	21068127	chr21:21068127:M	TTTTTTTTCTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:8:137,23,0	0/1:3,4:8:53,0,26	1/1:0,10:11:179,32,0
-chr21	21068459	chr21:21068459:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:10:147,0,27	0/1:5,7:14:155,0,94	0/0:10,0:11:0,30,255
-chr21	21070268	chr21:21070268:M	TATATATATATATATATATA	<9>,<11>	.	.	Motif=TA	GT:AD:DP:PL	0/1:6,19,1:26:255,0,47,255,78,255	1/2:0,15,7:23:255,137,189,255,0,255	0/0:31,0,0:31:0,91,255,91,255,255
-chr21	21071871	chr21:21071871:M	CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11>	.	.	Motif=CTAT	GT:AD:DP:PL	0/1:13,13:27:255,0,255	1/1:0,20:21:255,63,0	0/1:11,9:20:188,0,244
-chr21	21076117	chr21:21076117:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,7:23:134,0,255	0/1:12,9:23:175,0,255	0/0:29,0:29:0,87,255
-chr21	21080615	chr21:21080615:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:24:96,0,198	0/1:12,9:21:96,0,148	0/0:26,0:26:0,77,255
-chr21	21080657	chr21:21080657:M	AAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:143,13,0	0/1:1,2:3:45,0,17	0/0:4,0:5:0,15,149
-chr21	21081863	chr21:21081863:M	AAACAAACAAACA	<2.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:22,29:51:255,0,255	1/1:0,60:60:255,177,0	0/0:35,0:35:0,103,255
-chr21	21082226	chr21:21082226:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:13:103,0,146	1/1:0,3:4:97,12,0	0/0:17,0:20:0,59,255
-chr21	21082277	chr21:21082277:M	AAAACAAAAAAAAAAAAACAAAACAAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,4:14:227,101,90,109,0,193	2/2:0,0,12:13:255,255,255,39,36,0	1/1:2,20,0:22:255,29,0,255,65,255
-chr21	21085202	chr21:21085202:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:45:252,0,255	1/1:1,34:36:255,88,0	0/0:46,0:47:0,138,255
-chr21	21088971	chr21:21088971:M	AAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,15:26:255,0,211	1/1:0,19:21:255,62,0	0/0:37,0:38:0,114,255
-chr21	21106315	chr21:21106315:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:14:208,24,0	.	1/1:1,24:28:255,64,0
-chr21	21114827	chr21:21114827:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:40:255,117,0	1/1:2,27:30:255,52,0	1/1:1,38:40:255,100,0
-chr21	21115958	chr21:21115958:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTTTCATGCTGAGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<37.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,1:7:44,6,0	1/1:0,7:14:204,21,0	0/0:0,0:6:0,0,0
-chr21	21123400	chr21:21123400:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,25:28:255,46,0	1/1:2,27:30:255,53,0	1/1:1,40:41:255,103,0
-chr21	21125715	chr21:21125715:M	AGAGAGAGAGAGA	<10.5>,<11.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,6,21:27:255,255,205,85,0,4	1/2:0,4,10:14:255,132,91,55,0,13	2/2:0,4,19:23:255,255,199,69,12,0
-chr21	21128245	chr21:21128245:M	TTTTTTTTTTTTCTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,34:35:255,102,0	1/1:1,37:39:255,96,0
-chr21	21134065	chr21:21134065:M	TTTTTTTTTTTTTTTTT	<14>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	3/3:1,0,0,20:21:255,255,255,255,255,255,44,63,62,0	1/3:1,10,1,16:29:255,255,255,255,255,255,255,0,166,224	2/3:1,0,7,5:13:244,196,248,58,98,64,107,106,0,88
-chr21	21134711	chr21:21134711:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,32:33:255,255,255,79,97,0	1/2:0,18,10:30:255,151,93,255,0,255	2/2:1,0,19:20:255,255,255,41,59,0
-chr21	21135080	chr21:21135080:M	AAAAAAAAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,4:10:56,82,235,0,82,56	0/1:6,7,1:14:174,0,146,177,87,255	0/2:11,0,7:20:79,134,255,0,207,154
-chr21	21135246	chr21:21135246:M	AAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5,0:5:144,15,0,104,15,91	1/2:0,1,7:10:205,114,91,18,0,13	1/2:0,5,1:6:161,18,0,88,0,71
-chr21	21136465	chr21:21136465:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,71,255	0/1:12,19:33:255,0,233	0/0:15,0:18:0,44,255
-chr21	21136902	chr21:21136902:M	TTTTTTTTTTTT	<11>,<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,29,19:51:255,255,255,255,255,220,255,255,0,255	1/3:2,16,1,20:41:255,255,255,255,255,255,255,0,255,255	2/3:1,0,18,19:41:255,255,255,255,255,255,255,255,0,223
-chr21	21142366	chr21:21142366:M	TTTTTTTTTATGTTTTTTTTTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,2:6:72,17,18,26,0,46	1/2:1,6,2:9:113,17,7,66,0,83	1/2:0,5,3:8:146,51,28,71,0,62
-chr21	21143805	chr21:21143805:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,1,19:37:255,255,255,0,233,255	1/2:1,10,11:23:255,186,140,130,0,119	0/2:13,4,13:35:255,171,255,0,190,255
-chr21	21144345	chr21:21144345:M	AAAAAGAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,18:26:255,0,73	0/1:14,25:41:255,0,137	0/1:17,9:27:94,0,231
-chr21	21146547	chr21:21146547:M	ATATATATATGTATATATATATATATAT	<11>,<13>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,11:19:255,202,255,241,0,194	1/2:0,4,1:5:128,17,18,108,0,102	1/2:0,10,2:13:255,37,20,255,0,255
-chr21	21147706	chr21:21147706:M	ATATTATATACTATATATAATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,6:23:107,0,255	0/0:10,0:10:0,30,255	0/1:14,13:27:255,0,255
-chr21	21150978	chr21:21150978:M	ATATATATATAT	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,117,0	0/1:18,27:45:255,0,255	1/1:0,50:50:255,149,0
-chr21	21156569	chr21:21156569:M	ATAGATAGATTATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<13.5>,<14.5>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:8,12,0:20:160,0,87,184,143,255	0/0:29,1,0:31:0,71,255,87,255,255	1/2:0,6,6:14:236,105,72,89,0,71
-chr21	21158613	chr21:21158613:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:23:255,42,0	1/1:0,13:15:255,44,0	1/1:0,21:22:255,66,0
-chr21	21161562	chr21:21161562:M	TGTGTGTGTGTGTGTGTGTATGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,40:42:255,123,0	1/1:1,42:44:255,111,0	1/1:1,40:41:255,103,0
-chr21	21175533	chr21:21175533:M	AAAAAAAATAAAAAAAAATAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:28:0,76,255	0/0:27,0:27:0,79,255	0/1:15,14:31:157,0,175
-chr21	21198185	chr21:21198185:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,14:30:255,255,255,255,0,255	1/2:0,16,6:23:255,159,105,255,0,255	1/2:0,12,15:30:255,255,255,255,0,255
-chr21	21200410	chr21:21200410:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:17:240,22,0	0/1:5,14:20:180,0,37	1/1:3,21:25:255,20,0
-chr21	21200752	chr21:21200752:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:80,9,0	0/1:1,1:2:21,0,21	0/1:0,0:2:0,0,0
-chr21	21210968	chr21:21210968:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<20>,<21>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,24:26:255,255,255,75,64,0	1/2:0,11,10:23:255,167,100,204,0,142	2/2:0,2,18:20:255,255,255,60,24,0
-chr21	21212743	chr21:21212743:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:90,15,0	0/1:2,9:11:123,0,2	1/1:0,6:6:106,18,0
-chr21	21215733	chr21:21215733:M	AAATAAATAAATAAA	<2.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,37:37:255,109,0	1/1:0,30:30:255,88,0	1/1:0,29:29:255,86,0
-chr21	21236757	chr21:21236757:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,35:37:255,110,0	1/1:0,23:23:255,69,0	1/1:0,40:40:255,120,0
-chr21	21237950	chr21:21237950:M	TTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,17:20:255,60,0	1/1:0,23:26:255,78,0
-chr21	21251745	chr21:21251745:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,75,0	1/1:0,37:42:255,115,0	1/1:0,30:41:255,101,0
-chr21	21254899	chr21:21254899:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,25:28:255,79,0	1/1:0,23:25:255,73,0	1/1:0,32:33:255,97,0
-chr21	21254950	chr21:21254950:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,29:30:255,90,0	1/1:0,40:41:255,123,0
-chr21	21259920	chr21:21259920:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,42,0	1/1:0,16:16:255,48,0	1/1:0,18:18:255,54,0
-chr21	21260565	chr21:21260565:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,43:46:255,98,0	1/1:0,41:41:255,121,0	1/1:2,38:42:255,86,0
-chr21	21264743	chr21:21264743:M	TATATATATACATATATATATATTCCACTATATATATACATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,18:30:255,0,211	1/1:0,21:21:255,63,0	0/1:11,19:30:255,0,209
-chr21	21272498	chr21:21272498:M	GCGCGCGCGCGC	<4>,<7>	.	.	Motif=GC	GT:AD:DP:PL	1/2:0,11,6:17:255,80,111,242,0,241	1/2:0,27,13:40:255,169,238,255,0,255	1/2:1,11,5:17:255,53,98,226,0,240
-chr21	21272509	chr21:21272509:M	CACACACACACACACACACACACAC	<9.5>,<10.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,15,11:29:255,151,66,237,0,154	2/2:0,3,29:32:255,255,255,96,51,0	1/2:0,27,13:42:255,178,55,255,0,255
-chr21	21272935	chr21:21272935:M	CACACACACACACACACACACACACACACGGGACATGCATTCACACACATACACACACACACACACACACACACA	<35.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,3:3:80,9,0	0/0:0,0:1:0,0,0	1/1:0,1:1:27,3,0
-chr21	21280170	chr21:21280170:M	GTGTGTGTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,18:36:240,0,239	1/1:0,45:45:255,132,0	0/1:23,26:49:255,0,255
-chr21	21298589	chr21:21298589:M	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGATAGA	<10.5>,<11.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/2:0,8,13:23:255,226,166,140,0,79	1/1:0,20,0:21:255,60,0,255,58,255	1/2:0,13,12:28:255,206,132,225,0,151
-chr21	21301371	chr21:21301371:M	TTTTTTTTTTTCTATTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,11:18:255,0,94	1/1:0,29:30:255,90,0	0/1:13,19:35:255,0,255
-chr21	21308063	chr21:21308063:M	ACACACATACACACACACACACACGTACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,7:26:122,0,255	1/1:0,19:21:255,62,0	0/1:18,8:27:138,0,255
-chr21	21311336	chr21:21311336:M	TTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:71,0,44	1/1:0,8:10:251,29,0	0/1:1,3:4:77,0,18
-chr21	21312567	chr21:21312567:M	GAAAAAGAAAAAAAAA	<2.5>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:27,29:56:255,0,255	1/1:0,38:38:255,114,0	0/1:28,19:47:255,0,255
-chr21	21316534	chr21:21316534:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3,0:8:32,0,52,41,47,125	1/2:1,1,4:6:53,53,104,2,0,14	0/2:4,0,5:9:61,87,199,0,58,43
-chr21	21319704	chr21:21319704:M	TTATTTTTTTTTTATTTTT	<3.3>	.	.	Motif=TTATTT	GT:AD:DP:PL	1/1:1,35:36:255,85,0	1/1:1,48:50:255,125,0	1/1:0,33:33:255,99,0
-chr21	21327307	chr21:21327307:M	AAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:6:19,0,29	0/1:2,4:6:47,0,15	1/1:0,1:1:17,3,0
-chr21	21331518	chr21:21331518:M	TATATATATATATATATACTCTATATACATATATATATATACTCTATATACATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:6:54,13,0	1/1:0,3:3:32,8,0	1/1:0,4:5:43,11,0
-chr21	21331579	chr21:21331579:M	AGAGAGAGAGAGAGAGAGAGAGAGTGAGAGAGAGA	<20.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,2:2:53,6,0	0/0:1,0:2:0,3,28	1/1:0,3:6:118,17,0
-chr21	21331901	chr21:21331901:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:11,12:23:164,0,145	1/1:0,24:24:255,71,0	0/1:15,16:31:210,0,191
-chr21	21341709	chr21:21341709:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:0,29:30:255,85,0	1/1:1,19:21:255,33,0
-chr21	21343353	chr21:21343353:M	ACACATACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,7:15:255,121,160,203,0,186	2/2:0,0,14:15:234,255,255,41,41,0	1/2:0,11,13:24:255,221,255,255,0,251
-chr21	21346209	chr21:21346209:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:34:216,0,189	0/1:14,4:21:8,0,209	0/1:20,9:29:73,0,255
-chr21	21351118	chr21:21351118:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:87,9,0	1/1:0,5:7:168,21,0	1/1:0,3:4:97,12,0
-chr21	21352827	chr21:21352827:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,1,15:26:214,218,255,0,165,109	1/2:2,22,13:38:255,158,141,255,0,255	0/2:9,1,11:22:152,151,255,0,156,113
-chr21	21356988	chr21:21356988:M	AATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<10.8>,<11.8>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,9,10:19:255,191,139,149,0,119	1/1:0,14,0:14:255,41,0,255,41,255	1/2:0,3,4:7:153,74,55,48,0,36
-chr21	21365239	chr21:21365239:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<14>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,32,0:34:255,102,0,255,100,255	1/2:0,8,9:17:255,157,107,140,0,90	1/1:0,19,0:19:255,57,0,255,56,255
-chr21	21378176	chr21:21378176:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:0,39:39:255,115,0	1/1:0,47:50:255,146,0
-chr21	21385372	chr21:21385372:M	ACACACACACACACACACACACACACACGCACACACACATACACACACACA	<29.5>,<30.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:4,0,4:10:99,80,183,0,113,99	1/2:0,6,5:12:255,86,52,112,0,80	0/2:8,0,4:12:81,70,255,0,211,199
-chr21	21387177	chr21:21387177:M	CACACACACATACACACACACACACACACACACACACACACACACACA	<23>,<25>,<27>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,10,0,4:14:255,109,80,255,108,255,179,0,255,255	2/3:1,0,6,9:17:255,255,255,236,251,222,87,162,0,143	1/3:0,11,0,0:17:205,43,11,236,44,255,193,0,255,255
-chr21	21400598	chr21:21400598:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,6:19:52,0,171	0/0:20,1:23:0,47,255	0/1:13,8:21:79,0,168
-chr21	21411006	chr21:21411006:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:12:0,9,255	0/1:9,5:15:101,0,187	0/0:16,2:19:0,0,255
-chr21	21411220	chr21:21411220:M	ATATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:28,11:39:20,0,255	0/0:29,0:29:0,87,255	0/0:29,5:34:0,40,255
-chr21	21414474	chr21:21414474:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,9:18:110,0,109	0/0:13,0:14:0,41,233	1/1:2,14:17:225,14,0
-chr21	21414950	chr21:21414950:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,14:33:173,0,239	1/1:1,36:38:255,93,0	0/1:11,20:33:255,0,104
-chr21	21416495	chr21:21416495:M	AAAAAAAAAAAGAAAAGAAAAAAGAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,11:25:224,0,255	1/1:0,35:37:255,110,0	0/1:21,9:31:163,0,255
-chr21	21419306	chr21:21419306:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,6:10:142,0,58	1/1:0,11:14:255,41,0	0/1:3,5:10:119,0,57
-chr21	21431047	chr21:21431047:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,52	1/1:0,0:2:2,1,0	0/1:1,3:4:39,0,5
-chr21	21431124	chr21:21431124:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,17:36:177,0,208	1/1:0,12:16:191,35,0	0/1:18,18:36:189,0,187
-chr21	21431321	chr21:21431321:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:33:205,0,223	1/1:0,36:37:255,108,0	0/1:16,23:39:255,0,179
-chr21	21436760	chr21:21436760:M	TTTTTTTTTCTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6,1:17:63,0,146,93,140,255	1/2:0,10,21:34:255,255,255,171,0,183	0/1:21,24,0:45:255,0,251,255,255,255
-chr21	21436929	chr21:21436929:M	TTTTTTTTTTTATTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:12,17:29:219,0,130	0/0:34,1:35:0,85,255
-chr21	21437475	chr21:21437475:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,0,4:22:65,116,255,0,255,255	1/2:0,12,6:18:255,156,120,255,0,255	0/2:14,0,4:20:72,116,255,0,255,255
-chr21	21437909	chr21:21437909:M	ATATTATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:44,0:44:0,132,255	0/1:24,10:34:207,0,255	0/0:43,0:43:0,129,255
-chr21	21439123	chr21:21439123:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:29:0,87,255	0/1:14,9:24:174,0,255	0/0:29,0:33:0,95,255
-chr21	21440690	chr21:21440690:M	AAAAAAAAGAAAAGAAAAGAAAAGAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:255,0,255	0/1:17,14:31:255,0,255	0/1:15,19:34:255,0,255
-chr21	21443425	chr21:21443425:M	TTTTTTTTTTCTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:31:242,0,149	0/1:17,16:33:183,0,201	0/1:21,25:46:255,0,244
-chr21	21450290	chr21:21450290:M	GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:25,0:26:0,75,255	0/1:21,20:43:255,0,255
-chr21	21450772	chr21:21450772:M	ATGTATGTATGTATGTATGTAT	<8>	.	.	Motif=ATGT	GT:AD:DP:PL	0/0:15,2:17:0,2,255	0/1:11,5:17:70,0,234	0/0:11,1:12:0,12,246
-chr21	21450794	chr21:21450794:M	ACACACACACACACACACACACACACACACACACACACACA	<11.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,13:26:255,255,255,255,0,255	0/1:0,23,0:30:255,0,10,255,79,255	1/2:0,13,9:22:255,252,213,255,0,255
-chr21	21450959	chr21:21450959:M	ATATATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:23,20:43:255,0,255	0/1:17,30:48:255,0,166	0/1:17,22:39:255,0,204
-chr21	21452169	chr21:21452169:M	CACACACACACACACACACACACACACA	<12>,<13>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,24,18:42:255,255,215,255,0,255	0/1:11,9,0:23:217,0,253,173,192,255	1/2:1,14,11:26:255,153,137,235,0,181
-chr21	21452572	chr21:21452572:M	TATTGTATATATATTGTATTGT	<2.2>	.	.	Motif=TATTG	GT:AD:DP:PL	1/1:0,4:4:111,12,0	.	.
-chr21	21455211	chr21:21455211:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,5:15:248,125,99,144,0,193	0/1:8,6,0:17:76,0,92,118,130,255	1/1:1,12,1:16:204,26,0,216,18,255
-chr21	21460933	chr21:21460933:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,21:42:255,0,255	1/1:1,37:39:255,96,0	0/1:19,15:34:176,0,249
-chr21	21472968	chr21:21472968:M	ACACACACACACACACACACACACACGCACACATACACACACACACAC	<25>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,13:23:169,0,105	0/0:23,1:24:0,53,255	0/1:14,13:30:146,0,183
-chr21	21473301	chr21:21473301:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,10:25:121,0,215	0/0:26,0:26:0,77,255	0/1:16,9:25:96,0,228
-chr21	21473345	chr21:21473345:M	TATATATAATATACAAAATATATGTATAAATATATATATATATATATATTATATATA	<31.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,7:16:179,0,201	0/0:2,0:2:0,6,58	0/1:0,2:4:46,0,13
-chr21	21473904	chr21:21473904:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:24:109,0,181	1/1:1,13:16:205,19,0	0/1:16,7:24:55,0,215
-chr21	21474979	chr21:21474979:M	TATATATATAACACATATATAATACATTATAATACATATATATAATACACATATATAATGCACATATATATATATATA	<38>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,4:5:61,0,4	0/0:8,0:8:0,24,143	0/1:7,2:9:11,0,103
-chr21	21480367	chr21:21480367:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:7:58,0,14	0/0:4,0:4:0,12,66	1/1:0,4:4:68,12,0
-chr21	21488276	chr21:21488276:M	ATTATAATTAATTATAAT	<3.2>	.	.	Motif=ATTATA	GT:AD:DP:PL	1/1:0,44:44:255,132,0	1/1:0,26:26:255,78,0	1/1:0,45:45:255,135,0
-chr21	21495993	chr21:21495993:M	TATATATATATGAAATATATATATAATATATAAAATATATATAT	<24>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,10:15:196,0,76	1/1:0,5:5:117,15,0	0/1:5,3:10:48,0,96
-chr21	21500528	chr21:21500528:M	ATTTTCATTTTCCTTTT	<2.7>	.	.	Motif=ATTTTC	GT:AD:DP:PL	0/1:26,15:41:255,0,255	0/0:48,0:48:0,144,255	0/1:22,22:44:255,0,255
-chr21	21501618	chr21:21501618:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,0,8:28:65,145,255,0,255,255	0/1:13,16,0:29:195,0,142,255,190,255	1/2:5,29,17:51:255,224,255,255,0,255
-chr21	21507789	chr21:21507789:M	AAAAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,1,2:6:32,8,69,0,6,21	0/1:5,7,0:15:187,0,116,200,93,255	0/2:5,0,6:13:70,103,255,0,94,62
-chr21	21508809	chr21:21508809:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,8:9:241,27,0	.
-chr21	21514466	chr21:21514466:M	AAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,68,0	1/1:0,26:26:255,78,0	1/1:0,7:9:190,11,0
-chr21	21522244	chr21:21522244:M	ATATATATGAATACTATATTTATATATAAATATGATTATATAT	<19.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,11:11:255,33,0	1/1:0,2:2:73,6,0	0/1:6,5:11:152,0,126
-chr21	21522613	chr21:21522613:M	TTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<39>,<40>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:57,41,36,6,6,0	1/2:0,3,5:10:228,102,78,51,0,22	0/2:4,0,1:6:10,17,127,0,112,109
-chr21	21524424	chr21:21524424:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:29:0,81,255	0/1:10,17:30:255,0,213	0/0:27,0:28:0,81,255
-chr21	21527114	chr21:21527114:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,3:24:0,14,255	0/1:17,8:26:74,0,221	0/0:25,0:26:0,67,255
-chr21	21531827	chr21:21531827:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:14:0,40,235	0/1:7,4:12:34,0,93	0/0:28,1:31:0,73,255
-chr21	21533649	chr21:21533649:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:31:0,69,255	0/1:13,7:21:61,0,174	0/1:12,10:25:107,0,172
-chr21	21536394	chr21:21536394:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:15,9:25:95,0,189	0/1:10,12:24:166,0,111
-chr21	21540255	chr21:21540255:M	ATATATATATACACATATATATATATACACATATATATACATATATATATAT	<25>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,0:15:0,44,255	0/1:6,3:9:28,0,81	0/1:12,7:19:76,0,168
-chr21	21546804	chr21:21546804:M	TATATATATGTATATAAAAACATGTATGTATATATATGTATATACATACATGTTTATATATATACATATATATA	<23>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,2:7:35,0,121	0/1:1,3:6:66,0,39	0/1:10,4:14:72,0,240
-chr21	21548032	chr21:21548032:M	TGGTGGTGGTGGTGGTGGTGGT	<6.3>	.	.	Motif=TGG	GT:AD:DP:PL	0/0:20,0:22:0,64,255	0/1:11,14:29:202,0,120	0/0:22,0:24:0,70,255
-chr21	21548052	chr21:21548052:M	GTTTTTTTGTTTGTTTGTTTGTT	<7.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:11,9:21:209,0,236	0/0:29,0:29:0,87,255
-chr21	21551647	chr21:21551647:M	ACACACCCACACCACACACACACACACACACACACACACACACA	<19>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/2:16,0,9:26:93,166,255,0,255,221	0/1:7,12,0:21:255,0,157,255,130,255	0/2:17,0,12:29:131,215,255,0,255,220
-chr21	21556370	chr21:21556370:M	TTTTTTTTTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,11:25:135,0,164	0/1:8,17:26:218,0,72	1/1:2,27:30:255,52,0
-chr21	21562032	chr21:21562032:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:16,0:21:0,47,255	0/1:4,9:14:111,0,28	0/0:18,0:18:0,53,255
-chr21	21568386	chr21:21568386:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:32,0,120	0/0:11,0:12:0,32,183	0/0:14,1:16:0,26,223
-chr21	21569748	chr21:21569748:M	CACACACACACACAAGGAACACACACATACACGCACACACACA	<22.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/0:15,0:16:0,47,255	0/1:14,13:27:162,0,182
-chr21	21573511	chr21:21573511:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,1:42:0,95,255	0/1:8,11:20:138,0,84	0/0:23,0:23:0,68,255
-chr21	21574435	chr21:21574435:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/1:23,22:46:255,0,255	0/0:42,0:42:0,124,255
-chr21	21576758	chr21:21576758:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:5:101,60,48,14,0,2	1/2:1,6,3:11:148,42,28,64,0,78	1/2:0,2,3:5:102,49,35,27,0,18
-chr21	21577180	chr21:21577180:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:11,8:20:93,0,132	0/0:17,1:19:0,38,255
-chr21	21578022	chr21:21578022:M	ACACACACACACACACACACACACACACAC	<16>	.	.	Motif=AC	GT:AD:DP:PL	0/0:29,0:31:0,90,255	0/1:19,11:32:108,0,249	0/0:34,0:36:0,105,255
-chr21	21579437	chr21:21579437:M	ATATATATATATACATATA	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/1:15,6:22:114,0,255	0/0:33,0:33:0,99,255
-chr21	21581115	chr21:21581115:M	TTTTTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,12:16:221,255,255,29,47,0	1/2:0,17,5:26:255,80,69,255,0,255	2/2:0,1,12:16:232,239,255,43,17,0
-chr21	21592329	chr21:21592329:M	AAAAAAAAAACAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,106,255	0/1:22,17:39:196,0,255	0/0:42,0:43:0,127,255
-chr21	21599770	chr21:21599770:M	AAAACAAAACAAAAAAAAAC	<4.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:31,0:31:0,93,255	0/0:36,0:36:0,108,255	0/1:25,16:41:255,0,255
-chr21	21603052	chr21:21603052:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,31:32:255,96,0	1/1:0,23:25:255,74,0
-chr21	21603633	chr21:21603633:M	AAAAAAAAAATAGAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:38:255,112,0	0/1:20,24:44:255,0,227	0/1:23,22:45:255,0,255
-chr21	21616069	chr21:21616069:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:40:238,0,255	0/0:36,0:38:0,111,255	0/1:23,16:39:177,0,255
-chr21	21636654	chr21:21636654:M	ATTTATTTATTTATTTA	<5.2>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:27,22:49:255,0,255	0/1:19,15:34:182,0,255
-chr21	21639473	chr21:21639473:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:15,11:29:120,0,200	0/1:14,19:33:249,0,157
-chr21	21642019	chr21:21642019:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,111,255	0/1:11,8:20:148,0,245	0/1:10,5:18:86,0,222
-chr21	21658675	chr21:21658675:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:25:255,69,0	1/1:2,19:23:255,7,0	1/1:1,15:19:255,19,0
-chr21	21678015	chr21:21678015:M	TTTTTTTTTTTTTGTTTTTTTTGTTTTTTTTTTTTTT	<21>,<39>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:5:120,125,138,12,15,0	1/1:0,15,0:16:255,33,0,255,33,255	1/1:0,15,1:16:255,44,0,255,17,255
-chr21	21680621	chr21:21680621:M	TTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:12,3,0	1/1:0,11:12:255,36,0	1/1:0,13:15:255,45,0
-chr21	21689957	chr21:21689957:M	TATTATTATTTTATTA	<5.7>	.	.	Motif=TAT	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,43:43:255,129,0	1/1:0,38:38:255,114,0
-chr21	21691734	chr21:21691734:M	TTTTTTTTTTTTTT	<13>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45,0:47:255,138,0,255,141,255	1/2:1,24,7:34:255,182,129,255,0,255	1/2:1,22,15:40:255,255,255,255,0,255
-chr21	21692585	chr21:21692585:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,38:40:255,81,0	1/1:1,22:23:255,50,0	1/1:1,30:34:255,61,0
-chr21	21698212	chr21:21698212:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,20:23:249,22,0	1/1:1,11:14:124,7,0	1/1:2,12:14:145,11,0
-chr21	21703021	chr21:21703021:M	ATCATCATCATCATCATCA	<5.3>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:0,25:25:255,74,0	1/1:0,43:43:255,127,0
-chr21	21704904	chr21:21704904:M	TTTTCTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,48,0	0/1:5,9:15:222,0,109	0/1:4,15:23:255,0,69
-chr21	21712686	chr21:21712686:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:14,17:31:212,0,158	0/1:15,23:40:255,0,167
-chr21	21717302	chr21:21717302:M	TATACTATACT	<1.2>	.	.	Motif=TATAC	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:24,11:35:97,0,255	0/1:20,19:39:247,0,255
-chr21	21718440	chr21:21718440:M	AGTATAGTATACCATAGTATGTAT	<5>	.	.	Motif=AGTAT	GT:AD:DP:PL	1/1:0,24:24:255,66,0	1/1:0,32:32:255,89,0	1/1:0,32:32:255,89,0
-chr21	21720243	chr21:21720243:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTTCCT	<16.2>,<18.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,11,0:11:255,33,0,255,33,255	1/1:0,14,0:15:255,45,0,255,45,255	1/2:0,5,3:8:210,78,62,130,0,121
-chr21	21722379	chr21:21722379:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,1:19:0,29,255	0/1:13,13:26:255,0,255	0/1:6,10:17:230,0,114
-chr21	21725339	chr21:21725339:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,30	1/1:0,0:2:27,6,0	0/1:1,3:4:82,0,18
-chr21	21742413	chr21:21742413:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:10:203,2,0	0/1:1,1:2:22,0,21	0/1:7,1:9:3,0,164
-chr21	21755217	chr21:21755217:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:14,18:32:228,0,156	0/1:15,13:29:165,0,192
-chr21	21755677	chr21:21755677:M	TTTTTTTTTTTGTTTGTTTTGTTTTGTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:41:0,67,255	0/1:13,8:25:99,0,198	0/1:17,19:43:255,0,242
-chr21	21757626	chr21:21757626:M	AAAAAAAAAAAAAGAAAAAAAGAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:14,9:24:94,0,174	0/1:4,16:20:227,0,13
-chr21	21762446	chr21:21762446:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<6>,<10>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,37,0:37:255,111,0,255,111,255	1/2:0,16,15:31:255,255,255,255,0,255	1/2:0,22,9:32:255,176,185,255,0,255
-chr21	21780037	chr21:21780037:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGT	<20>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,6,0:16:127,0,228,156,168,255	1/2:1,9,8:18:255,119,192,219,0,210	0/2:5,0,7:12:89,123,255,0,88,53
-chr21	21790945	chr21:21790945:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,1,3:7:32,34,98,0,27,42	1/2:2,2,2:8:38,5,37,23,0,63	0/1:2,7,0:10:103,0,5,127,29,210
-chr21	21793477	chr21:21793477:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,1:37:0,89,255	0/1:14,26:44:255,0,139	0/1:14,17:33:213,0,185
-chr21	21809024	chr21:21809024:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:14:255,42,0	1/1:0,10:12:255,35,0	1/1:0,13:13:255,39,0
-chr21	21816049	chr21:21816049:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,22,9:31:255,236,174,255,0,255	0/2:14,1,9:25:185,218,255,0,227,255	0/1:12,20,0:34:255,0,118,255,215,255
-chr21	21831461	chr21:21831461:M	TATATATATATATATATATATATATATATATATATATATATA	<8>,<10>,<14>	.	.	Motif=TA	GT:AD:DP:PL	1/3:0,9,2,10:28:255,255,255,255,255,255,255,0,188,255	1/2:0,10,7,0:18:255,150,101,228,0,174,255,150,228,255	3/3:1,0,0,7:13:255,255,255,255,255,255,2,32,29,0
-chr21	21831902	chr21:21831902:M	ACACACACACACACACACACACACACACACA	<12.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,17:35:255,255,255,255,0,255	0/1:10,8,0:19:194,0,240,219,174,255	0/2:13,0,18:31:236,255,255,0,235,145
-chr21	21849015	chr21:21849015:M	TGTGTGTGTTTATGTGTGTATGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<25.5>,<28.5>,<31.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,5,0:12:255,92,120,184,0,169,255,141,184,255	2/3:1,0,7,1:10:106,133,248,10,38,13,102,209,0,202	1/3:0,9,0,4:13:255,108,83,255,110,255,255,0,255,246
-chr21	21853576	chr21:21853576:M	ACACACACACACACATACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,11:29:49,0,130	0/0:32,0:35:0,95,255	0/1:14,9:30:23,0,159
-chr21	21861251	chr21:21861251:M	ACACACACACACACACAC	<8>,<10>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,14:32:255,255,255,255,0,255	0/2:23,0,16:39:178,255,255,0,255,255	0/1:14,23,0:37:255,0,156,255,226,255
-chr21	21863873	chr21:21863873:M	ACAACAACAACAACAACAACAACAACAACAACAACAACAA	<10>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:9,18:27:255,0,172	0/0:23,0:23:0,69,255	0/1:9,10:20:218,0,203
-chr21	21869562	chr21:21869562:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,18:35:232,0,214	0/0:35,0:37:0,108,255	0/1:6,15:21:210,0,47
-chr21	21870371	chr21:21870371:M	TTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,4,1:7:50,0,19,38,3,140	1/1:0,16,0:18:255,52,0,255,54,255	1/2:0,9,6:18:255,180,179,158,0,255
-chr21	21871318	chr21:21871318:M	ATTATTATTATTATTATTATTATTATTATT	<11>,<12>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,9,0:23:106,0,202,148,255,255	0/2:8,0,2:10:28,35,151,0,142,203	1/2:0,10,11:21:255,202,144,159,0,126
-chr21	21878669	chr21:21878669:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:16,17:33:205,0,186	0/1:17,19:36:243,0,204
-chr21	21886166	chr21:21886166:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:37:0,91,255	0/1:10,12:26:138,0,100	0/0:25,0:33:0,66,255
-chr21	21890012	chr21:21890012:M	TTTTGTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:150,0,185	0/1:16,22:38:255,0,160	0/0:38,0:39:0,114,255
-chr21	21891325	chr21:21891325:M	TTTTTTTTGTTTGTTTGTTTTGTTTTTTGTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,16:30:221,0,181	0/1:11,13:25:163,0,133	0/0:34,0:34:0,100,255
-chr21	21895791	chr21:21895791:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:11:136,0,80	1/1:0,2:6:56,7,0	0/1:5,1:7:16,0,120
-chr21	21900123	chr21:21900123:M	AAAGAAAAAAAAAAAAAGAAAGAAAGAAAG	<6.5>,<7.8>	.	.	Motif=AAAG	GT:AD:DP:PL	2/2:0,0,19:20:247,255,255,55,60,0	2/2:1,0,21:22:248,255,255,48,65,0	1/2:0,13,9:22:255,110,175,234,0,255
-chr21	21900498	chr21:21900498:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:9:116,8,0	0/1:3,3:8:43,0,30	1/1:0,1:1:17,3,0
-chr21	21909098	chr21:21909098:M	ACACACACACACACACACACACAC	<11>,<14>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,34:34:255,255,255,102,102,0	2/2:0,0,28:30:255,255,255,84,90,0	1/2:0,18,12:30:255,255,255,255,0,255
-chr21	21911154	chr21:21911154:M	AAAAAAAAAAAAAAAAAGAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,46,0	1/1:1,11:13:156,13,0	0/1:2,6:8:77,0,10
-chr21	21911395	chr21:21911395:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/0:42,3:45:0,80,255	0/1:14,21:37:255,0,160
-chr21	21912501	chr21:21912501:M	CACACACACACACACACACACACACACACACACACACACACACA	<17>,<23>	.	.	Motif=CA	GT:AD:DP:PL	0/2:16,0,13:30:141,227,255,0,255,205	0/0:15,0,0:18:0,53,255,52,255,255	1/2:2,11,5:21:255,51,110,255,0,255
-chr21	21913199	chr21:21913199:M	TTTTCTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:36:0,105,255	0/0:33,0:37:0,99,255	0/1:22,20:42:255,0,255
-chr21	21913905	chr21:21913905:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:7:87,3,0	0/1:2,6:8:77,0,10	1/1:0,6:7:113,20,0
-chr21	21921722	chr21:21921722:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,38:38:255,112,0	1/1:1,54:55:255,144,0
-chr21	21928854	chr21:21928854:M	ACACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:13:0,38,243	0/0:10,0:10:0,29,177	0/1:16,9:25:91,0,219
-chr21	21930841	chr21:21930841:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,27:28:255,81,0	0/1:9,4:18:64,0,215
-chr21	21931300	chr21:21931300:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,4:4:70,70,70,12,12,0	1/2:1,3,6:10:139,67,82,33,0,21	1/2:0,1,2:3:54,29,26,17,0,8
-chr21	21931502	chr21:21931502:M	ATATATATTATATATAATAATGTAACATATATTATATAGTATATATATATATA	<28.5>,<29.5>,<31.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:0,0,7,5:14:255,239,216,127,125,93,157,87,0,124	2/2:0,0,5,0:5:141,75,60,15,14,0,124,74,15,115	1/1:0,8,0,0:8:186,24,0,119,22,98,201,24,121,228
-chr21	21931554	chr21:21931554:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	<11>,<13>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,17,19:44:255,239,255,255,0,255	2/2:0,0,18:20:236,255,255,55,54,0	0/1:8,8,2:20:196,0,184,174,72,228
-chr21	21944388	chr21:21944388:M	TTTTTCTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,8:20:93,99,255,0,173,134	0/0:9,1,0:11:0,5,244,20,163,151	1/2:0,10,4:14:255,58,27,169,0,130
-chr21	21947321	chr21:21947321:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:31:255,90,0	1/1:0,35:37:255,108,0	1/1:0,34:35:255,103,0
-chr21	21957321	chr21:21957321:M	ATATATATACATATATATATATATATATAT	<16>	.	.	Motif=AT	GT:AD:DP:PL	0/0:23,1:24:0,52,255	0/1:4,7:11:93,0,39	0/1:10,12:23:154,0,126
-chr21	21959696	chr21:21959696:M	AATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,40:40:255,118,0	1/1:0,34:34:255,100,0
-chr21	21963149	chr21:21963149:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:19:255,56,0	1/1:1,27:29:255,65,0	1/1:2,24:27:255,44,0
-chr21	21970357	chr21:21970357:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,23:25:255,72,0	1/1:1,31:33:255,78,0
-chr21	21972019	chr21:21972019:M	TTTTTTTTTTGTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30,0:32:255,96,0,255,94,255	1/1:0,29,1:31:255,90,0,255,73,255	1/2:1,15,14:31:255,193,170,253,0,186
-chr21	21980902	chr21:21980902:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:6:65,0,0	0/1:1,3:5:47,0,3	1/1:0,4:6:97,17,0
-chr21	21986197	chr21:21986197:M	TCTTTCTTTCTTTCTTTCTTCTTT	<7>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:12,7:20:70,0,176	0/0:22,0:22:0,64,255	0/1:12,9:22:96,0,167
-chr21	21986218	chr21:21986218:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:15:0,0,134	0/0:12,0:13:0,35,201	0/1:5,8:14:99,0,48
-chr21	21986630	chr21:21986630:M	TATATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,4:8:56,0,10	0/1:0,1:2:10,0,7	0/0:0,0:2:0,1,2
-chr21	21987890	chr21:21987890:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/0:33,0:34:0,102,255	0/1:15,18:34:255,0,255
-chr21	21994807	chr21:21994807:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>	.	.	Motif=TG	GT:AD:DP:PL	0/0:13,1:15:0,16,205	0/1:6,8:14:95,0,61	0/1:5,11:16:146,0,40
-chr21	21997415	chr21:21997415:M	CTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCT	<22>	.	.	Motif=CT	GT:AD:DP:PL	0/1:12,10:22:123,0,160	1/1:2,19:22:255,27,0	0/0:21,1:22:0,47,255
-chr21	21998954	chr21:21998954:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8,1:20:183,0,234,201,158,255	1/1:1,17,0:22:255,34,0,255,54,255	0/2:14,0,7:26:48,109,255,0,243,225
-chr21	22018550	chr21:22018550:M	GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,10:21:121,0,122	0/1:13,5:19:34,0,172	1/1:1,17:18:255,35,0
-chr21	22019648	chr21:22019648:M	TATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,30:38:255,93,0	1/1:1,19:23:255,40,0	1/1:1,23:25:255,47,0
-chr21	22019664	chr21:22019664:M	TGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:2,36:43:255,65,0	1/1:0,18:18:255,54,0	1/1:0,23:26:255,69,0
-chr21	22027397	chr21:22027397:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:255,38,0	1/1:0,17:18:255,51,0	1/1:0,20:20:255,60,0
-chr21	22027975	chr21:22027975:M	AAAAAAAAAAAAAAAAGAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:22:255,60,0	1/1:1,25:30:255,53,0	1/1:2,27:34:255,31,0
-chr21	22028158	chr21:22028158:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:2,36:40:255,81,0	1/1:0,36:36:255,106,0
-chr21	22037072	chr21:22037072:M	ATTTTTATTTTTATTTTTATTT	<4.7>	.	.	Motif=ATTTTT	GT:AD:DP:PL	1/1:0,29:34:255,61,0	1/1:0,29:33:255,61,0	1/1:0,28:32:255,51,0
-chr21	22038801	chr21:22038801:M	TTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:188,21,0	1/1:0,4:6:147,18,0	1/1:0,5:9:199,26,0
-chr21	22079649	chr21:22079649:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:14,13:29:149,0,167	0/0:34,0:34:0,100,255
-chr21	22085803	chr21:22085803:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,47:49:255,126,0	1/1:0,41:41:255,120,0	1/1:2,45:47:255,102,0
-chr21	22095972	chr21:22095972:M	TTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,16,0:22:255,0,26,207,82,255	1/2:0,5,3:10:228,39,10,82,0,59	1/2:0,13,7:25:255,91,37,166,0,129
-chr21	22107048	chr21:22107048:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,104,0	0/1:20,15:35:168,0,255	1/1:0,44:44:255,130,0
-chr21	22110951	chr21:22110951:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,10:13:173,35,0	.
-chr21	22113151	chr21:22113151:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,62,0	0/1:4,11:15:145,0,25	0/1:10,7:18:82,0,125
-chr21	22115310	chr21:22115310:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:63,11,0	1/1:0,2:2:34,6,0	0/1:3,4:9:57,0,29
-chr21	22133073	chr21:22133073:M	GGGGGGGGGGG	<12>,<13>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,6,0:6:105,18,0,105,18,105	1/2:0,8,3:11:187,50,18,110,0,101	0/1:12,3,0:16:5,0,172,44,214,255
-chr21	22137207	chr21:22137207:M	AAATATAATATATATAAATATAAAT	<4.5>	.	.	Motif=AAATAT	GT:AD:DP:PL	0/1:12,15:27:255,0,237	0/1:18,9:27:154,0,255	0/0:43,0:43:0,129,255
-chr21	22137249	chr21:22137249:M	AAAACAAAAACAAA	<2.5>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,40:40:255,120,0	1/1:0,43:43:255,129,0
-chr21	22156912	chr21:22156912:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17,1:33:217,0,190,255,216,255	0/2:13,1,11:27:127,172,255,0,164,163	0/1:11,26,1:40:255,0,92,255,150,255
-chr21	22165708	chr21:22165708:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:255,199,173,30,29,0	1/2:2,13,8:23:255,97,65,145,0,170	2/2:0,0,5:6:151,109,95,18,17,0
-chr21	22169136	chr21:22169136:M	AAAAAAAAAAAAAAAAAAAAAAA	<18>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,3:4:52,60,92,9,10,0	1/2:0,3,3:7:134,48,68,94,0,85	0/0:9,0,0:12:0,30,255,20,178,148
-chr21	22173482	chr21:22173482:M	ATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,37:39:255,114,0	1/1:2,38:40:255,82,0	0/1:18,24:44:255,0,199
-chr21	22181778	chr21:22181778:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:217,0,180	0/0:27,2:30:0,44,255	0/1:18,15:35:175,0,230
-chr21	22187839	chr21:22187839:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:138,0,160	0/0:19,0:19:0,56,255	0/1:18,9:28:84,0,255
-chr21	22190801	chr21:22190801:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:13:195,21,0	1/1:1,8:9:118,9,0	1/1:0,16:16:255,47,0
-chr21	22227390	chr21:22227390:M	TTTTTTATTTTTTTTTGTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:27:0,61,255	0/0:43,0:44:0,129,255	0/1:21,17:38:205,0,255
-chr21	22232657	chr21:22232657:M	GGAAGGAAGGGAGGAAGGAAGGAAGGAAAAGAAGGAAGGAAGAAAGGAAGGAAAAAAGGAAGGAGGGAGGGAGGGAAGGAA	<33.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,9:9:106,25,0	1/1:0,3:3:35,8,0	1/1:0,2:3:23,5,0
-chr21	22237285	chr21:22237285:M	TCTCTCTCTCTCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:14,11:30:126,0,214	0/1:4,1:8:1,0,73	0/0:23,0:25:0,71,255
-chr21	22237303	chr21:22237303:M	TATATATATATATATTACATATATATATATATATATA	<20.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,18:23:255,32,0	1/1:0,0:1:0,0,0	0/1:12,8:22:138,0,238
-chr21	22237532	chr21:22237532:M	ACACACACACACACATACATATACACACACACACACACACACACACACACACACACA	<23.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:17,0,0:19:0,57,255,57,255,255	0/1:7,7,0:14:168,0,162,189,183,255	0/2:7,0,5:12:106,127,255,0,182,167
-chr21	22238420	chr21:22238420:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,11:13:255,36,0	0/0:1,0:3:0,8,51
-chr21	22258321	chr21:22258321:M	TAGATGATAGCTAGCTAGCTAGCTAGATAGATAGATAGATAGATA	<10.2>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,20:20:255,59,0	1/1:0,6:6:112,18,0
-chr21	22262706	chr21:22262706:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,43:47:255,127,0	0/1:20,17:37:183,0,234	0/1:18,23:41:255,0,197
-chr21	22265996	chr21:22265996:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	1/1:1,12:13:187,21,0	1/1:0,15:15:255,44,0
-chr21	22269977	chr21:22269977:M	TATATATATATATATA	<9>,<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/3:1,13,1,17:32:255,255,255,255,255,255,230,0,239,255	1/2:0,10,7,0:17:255,126,77,152,0,131,255,107,179,255	3/3:0,0,2,15:23:255,255,255,255,255,255,56,50,18,0
-chr21	22271183	chr21:22271183:M	TTTTCTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:7,0:7:0,21,135	0/0:3,0:4:0,11,64	0/1:4,6:11:83,0,45
-chr21	22271870	chr21:22271870:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,20:48:243,0,255	0/1:21,28:49:255,0,228	1/1:1,38:39:255,97,0
-chr21	22277803	chr21:22277803:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:21,31:52:255,0,220	0/0:41,0:41:0,121,255
-chr21	22278107	chr21:22278107:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:30:255,86,0	1/1:0,15:16:255,48,0	1/1:0,14:15:255,45,0
-chr21	22282463	chr21:22282463:M	TCTCTCTCTCTCTCTCTCTCTCTCTC	<17>	.	.	Motif=TC	GT:AD:DP:PL	0/1:22,8:30:127,0,255	0/1:17,18:36:255,0,255	0/1:11,9:20:188,0,242
-chr21	22283049	chr21:22283049:M	TTTTCTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:140,0,86	0/1:3,5:9:68,0,25	0/1:5,14:20:194,0,29
-chr21	22285674	chr21:22285674:M	TATATAGATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,13:33:154,0,255	0/1:23,15:38:160,0,255	0/1:17,20:37:255,0,210
-chr21	22290578	chr21:22290578:M	TGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:25,18:43:255,0,255	0/1:25,31:57:255,0,255	0/1:24,27:52:255,0,255
-chr21	22291414	chr21:22291414:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,9:26:99,0,222	0/1:18,16:34:181,0,218	0/1:12,10:24:120,0,158
-chr21	22294925	chr21:22294925:M	AAAAAAAAAACAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:26:255,0,225	0/1:9,9:18:181,0,191	0/1:7,13:20:255,0,132
-chr21	22295091	chr21:22295091:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:255,30,0	1/1:0,7:8:209,24,0	1/1:0,2:5:98,14,0
-chr21	22295638	chr21:22295638:M	GTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGT	<17>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,5:16:255,89,99,255,0,255	1/2:0,20,14:34:255,236,255,255,0,255	1/2:0,11,10:24:255,189,242,255,0,255
-chr21	22296202	chr21:22296202:M	CATAACATAACATAACATAACATAACATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCAT	<11.6>,<13.6>,<15.6>	.	.	Motif=CATAG	GT:AD:DP:PL	2/3:0,0,8,1:10:255,255,255,22,37,9,240,236,0,231	2/3:0,0,8,2:10:255,255,255,37,67,39,234,229,0,223	1/3:0,11,0,4:15:255,77,109,255,135,255,255,0,255,255
-chr21	22300006	chr21:22300006:M	AATAAATAAATAAATAAATAAATAAATAAA	<10.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,4:4:113,12,0	1/1:0,4:4:113,12,0	1/1:0,10:11:255,33,0
-chr21	22309259	chr21:22309259:M	AATTAATTGATTAATTAATTGTATTAATAATTATTAATAATTATATTAATAATTA	<14.8>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,4:4:65,12,0	1/1:0,9:9:149,26,0
-chr21	22312532	chr21:22312532:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:4,26:32:255,21,0	1/1:3,19:24:255,15,0	1/1:3,35:40:255,55,0
-chr21	22314934	chr21:22314934:M	TATATATATATATATATAATTATATATGTACATATATATA	<18>,<19>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,13,13:26:255,215,176,252,0,176	1/2:0,4,1:5:136,15,3,73,0,58	1/2:0,8,5:13:255,80,56,149,0,112
-chr21	22320057	chr21:22320057:M	ACACACACACACACACACACACACACACACACATATATATATACACATACACATACACACACACACAC	<38>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,4:11:85,0,145	0/1:6,3:9:56,0,142	0/1:1,0:3:6,0,23
-chr21	22320726	chr21:22320726:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,5,5,0:12:255,133,108,148,0,126,244,82,148,229	1/2:0,15,7,0:25:255,188,127,255,0,255,255,115,255,255	1/3:0,10,0,5:16:255,135,102,255,76,255,255,0,255,255
-chr21	22322259	chr21:22322259:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:0,23:23:255,68,0	1/1:2,41:45:255,96,0
-chr21	22326471	chr21:22326471:M	TTTTGTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<38>,<39>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:4:42,0,6,45,18,72	2/2:0,0,2:2:54,39,34,6,6,0	1/2:0,2,3:5:105,52,38,30,0,21
-chr21	22355494	chr21:22355494:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:11:37,68,201,0,102,90	0/1:11,4,0:15:23,0,139,65,151,248	0/2:6,1,4:11:36,50,164,0,69,82
-chr21	22367768	chr21:22367768:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,11,8:22:255,87,79,112,0,165	1/1:3,13,3:19:204,4,0,137,4,204	1/2:0,11,4:19:255,79,42,153,0,143
-chr21	22368161	chr21:22368161:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTGTGTGTGTATGTATGTTTGTGTGTGTGTGTGTG	<34.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,4:11:60,0,44	0/1:3,3:6:33,0,33	0/1:8,5:14:56,0,100
-chr21	22371281	chr21:22371281:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:28:200,0,162	0/0:44,1:47:0,120,255	0/1:28,17:47:185,0,255
-chr21	22386058	chr21:22386058:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,7,4:14:132,38,78,100,0,180	1/2:0,9,8:18:239,129,173,155,0,216	1/2:1,11,7:19:235,102,150,169,0,255
-chr21	22389137	chr21:22389137:M	ATTTATTTATTTATTTATTT	<6>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:21,16:37:181,0,255	1/1:0,29:29:255,86,0
-chr21	22394071	chr21:22394071:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:32:255,95,0	1/1:2,39:42:255,87,0	1/1:1,34:40:255,98,0
-chr21	22397934	chr21:22397934:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,15:17:255,255,255,48,31,0	1/2:2,7,5:16:162,33,45,50,0,100	2/2:0,1,11:14:255,229,197,38,23,0
-chr21	22402360	chr21:22402360:M	TTTTTTTTTTTTTTTATTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,36:40:255,116,0	1/1:0,27:27:255,81,0
-chr21	22409781	chr21:22409781:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<15.2>	.	.	Motif=CCTT	GT:AD:DP:PL	1/1:0,11:13:255,32,0	1/1:0,9:13:217,29,0	1/1:0,18:24:255,55,0
-chr21	22417700	chr21:22417700:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,11:18:171,0,36	1/1:0,16:21:255,50,0	0/1:14,16:33:219,0,149
-chr21	22419763	chr21:22419763:M	ATATATATATATATGTATAT	<22>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:0,6,2:13:153,0,15,140,19,172	2/2:0,0,1:1:12,12,12,3,3,0	1/2:0,3,4:9:123,38,24,84,0,73
-chr21	22420261	chr21:22420261:M	ATGTATGTATTTATGTGTGTAT	<4.5>	.	.	Motif=ATGT	GT:AD:DP:PL	1/1:0,41:42:255,121,0	0/1:12,17:30:221,0,131	1/1:0,55:56:255,162,0
-chr21	22421148	chr21:22421148:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,100,0	0/1:26,20:46:223,0,255	1/1:1,25:26:255,59,0
-chr21	22422148	chr21:22422148:M	ACACACACACACACACACACACACACACACACA	<9.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,36,0:39:255,117,0,255,117,255	1/2:0,9,6:16:255,170,144,234,0,213	1/1:0,38,0:43:255,129,0,255,129,255
-chr21	22422180	chr21:22422180:M	ATATATATATATATA	<3.5>,<9.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,7,0,8:18:255,224,203,255,189,255,255,0,255,255	1/2:0,2,7,1:14:218,156,210,81,0,58,175,131,54,197	3/3:0,0,0,3:3:82,82,82,69,69,62,9,9,9,0
-chr21	22424318	chr21:22424318:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:3,1,26:30:255,255,255,33,69,0	1/2:0,10,13:24:255,188,157,171,0,106	2/2:1,1,25:27:255,255,255,61,61,0
-chr21	22427198	chr21:22427198:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:8:40,0,40	0/0:9,0:9:0,26,136	0/0:4,1:6:0,2,56
-chr21	22431129	chr21:22431129:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,0:5:14,0,100	0/1:4,3:10:114,0,85	0/0:5,0:7:0,15,155
-chr21	22431843	chr21:22431843:M	TTTTATTATCATTTTATTTTATTTTATTTT	<6.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:1,25:26:255,54,0	1/1:0,28:28:255,84,0	1/1:0,30:30:255,90,0
-chr21	22440522	chr21:22440522:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:22:255,45,0	0/1:16,11:30:104,0,218	1/1:1,17:19:255,38,0
-chr21	22445459	chr21:22445459:M	TCTCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,43:45:255,135,0	0/1:19,14:38:255,0,255	1/1:0,36:38:255,114,0
-chr21	22449053	chr21:22449053:M	TTTTTTTCTTTTTTTTGTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:28:255,83,0	0/1:15,10:28:115,0,194	1/1:1,43:44:255,111,0
-chr21	22456607	chr21:22456607:M	GTGTGTGTGTGTGT	<6>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,11:11:139,31,0	0/1:1,3:4:26,0,1	1/1:0,10:10:125,28,0
-chr21	22460603	chr21:22460603:M	ATATATATATATATAATTATATTTAAAAATATAATTATATATAT	<21>,<23>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,6,14:23:165,151,242,61,0,70	1/2:0,2,2:5:32,21,30,21,0,31	1/2:0,4,11:16:123,118,191,40,0,41
-chr21	22461339	chr21:22461339:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:170,18,0	0/1:0,2:3:48,0,4	1/1:0,7:9:216,24,0
-chr21	22481465	chr21:22481465:M	AAAAAAAAAAAAAAAGAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,15:16:255,255,236,48,46,0	2/2:0,1,14:19:255,249,209,47,33,0	1/2:0,3,8:12:216,117,88,36,0,13
-chr21	22508091	chr21:22508091:M	TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:18,0,23	0/0:5,0:5:0,15,83	0/1:5,3:8:28,0,61
-chr21	22511605	chr21:22511605:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,6:19:53,0,168	0/1:8,7:16:73,0,99	1/1:1,11:13:184,20,0
-chr21	22553830	chr21:22553830:M	ACACACACACACACACACATACACACTCATACACACAC	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,27:29:255,86,0	1/1:0,26:26:255,78,0	1/1:0,26:28:255,83,0
-chr21	22556100	chr21:22556100:M	TATATATATATATATATATATATATGTATATATATATGTATATATA	<19>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,28:30:255,89,0	1/1:0,14:14:255,42,0	1/1:0,11:12:255,36,0
-chr21	22558509	chr21:22558509:M	TTTTCTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:136,15,0	1/1:0,7:8:237,24,0	1/1:0,4:6:168,18,0
-chr21	22559635	chr21:22559635:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,4:6:154,68,51,34,0,17	1/2:0,3,5:8:202,82,59,49,0,26	1/2:0,1,3:4:102,50,39,17,0,5
-chr21	22562387	chr21:22562387:M	CACACACACACACACACAAACACACACACACACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,22:24:255,71,0	1/1:0,29:29:255,87,0
-chr21	22562733	chr21:22562733:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:11,4,0	1/1:0,0:2:7,2,0	1/1:0,3:4:91,11,0
-chr21	22563552	chr21:22563552:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,27:31:255,91,0	1/1:0,19:22:255,65,0
-chr21	22564127	chr21:22564127:M	TTTTTTTTTGTTTGTTTTGTTTTG	<5.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,30:30:255,90,0	1/1:0,32:32:255,96,0
-chr21	22567823	chr21:22567823:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,10:11:255,172,142,30,16,0	0/2:1,1,4:6:89,47,46,0,2,12	1/2:0,4,6:10:192,92,64,51,0,33
-chr21	22569707	chr21:22569707:M	AAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7,1:8:207,24,0,129,6,108	1/2:0,3,5:9:215,85,60,60,0,37	1/1:0,11,1:13:255,38,0,220,20,187
-chr21	22570428	chr21:22570428:M	GTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,34:35:255,105,0	1/1:0,39:39:255,117,0	1/1:0,28:29:255,87,0
-chr21	22575672	chr21:22575672:M	ATATATATATATAT	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,16:21:86,27,0	1/1:0,9:10:52,18,0	1/1:0,24:24:138,48,0
-chr21	22578639	chr21:22578639:M	AAAAAAAAAATAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,35:38:255,110,0	1/1:0,36:36:255,106,0
-chr21	22579088	chr21:22579088:M	TTTTTTTTTCTTTTTTTTCTTTTTCTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:1,25:26:255,59,0	1/1:0,21:21:255,62,0
-chr21	22587030	chr21:22587030:M	AAAAAAAAAAAAAGAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:43:255,126,0	1/1:1,26:30:255,67,0	1/1:0,38:39:255,114,0
-chr21	22593282	chr21:22593282:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:33:233,0,160	0/1:11,11:24:122,0,141	0/0:23,1:25:0,55,255
-chr21	22593864	chr21:22593864:M	AAAAAAAAAAAAAAAAAA	<17>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,2,3:10:58,44,114,0,52,162	0/0:2,0,0:3:0,9,46,6,42,57	0/1:11,4,0:16:23,0,158,67,192,255
-chr21	22602555	chr21:22602555:M	TATATATATATATATATATATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:6:139,15,0	1/1:0,6:7:177,21,0	1/1:0,25:25:255,75,0
-chr21	22612048	chr21:22612048:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,10:17:130,0,76	0/1:10,6:18:53,0,130	0/0:13,0:13:0,38,228
-chr21	22615153	chr21:22615153:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,4:6:94,58,52,28,0,13	1/1:0,3,0:4:101,12,0,72,12,62	1/2:0,1,3:5:68,42,39,17,0,5
-chr21	22615924	chr21:22615924:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:36:202,0,251	1/1:0,29:29:255,85,0	0/1:14,18:32:234,0,161
-chr21	22622798	chr21:22622798:M	ACACACACACACACACACACACACACACACA	<20.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,6,0,0:23:129,0,255,177,255,255,177,255,255,255	1/3:0,7,0,3:12:255,85,58,255,51,254,212,0,212,203	0/2:18,0,8,0:27:182,235,255,0,255,255,149,255,255,255
-chr21	22624464	chr21:22624464:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,22:37:255,0,174	1/1:0,37:37:255,109,0	0/1:18,18:37:232,0,222
-chr21	22629244	chr21:22629244:M	TATATATATACATATACACATATATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,15:24:255,0,172	1/1:0,28:28:255,84,0	0/1:7,13:20:255,0,132
-chr21	22631152	chr21:22631152:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23:39:255,0,189	1/1:0,36:36:255,106,0	0/1:25,26:51:255,0,255
-chr21	22633079	chr21:22633079:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,13:38:134,0,255	1/1:1,37:38:255,94,0	0/0:40,2:42:0,87,255
-chr21	22634146	chr21:22634146:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,9:27:86,0,252	1/1:2,24:27:255,44,0	0/0:23,1:26:0,48,255
-chr21	22634315	chr21:22634315:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	<11.5>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:9,11:20:123,0,90	0/0:24,1:25:0,57,255	1/1:0,27:27:255,79,0
-chr21	22634363	chr21:22634363:M	TAGATAGATAGATA	<2.5>,<4.5>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:27,18,0:45:208,0,255,255,255,255	1/2:0,23,19:42:255,255,255,255,0,255	0/0:53,0,0:53:0,156,255,156,255,255
-chr21	22642380	chr21:22642380:M	TTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:19:255,57,0	1/1:1,13:14:255,8,0	1/1:0,31:33:255,98,0
-chr21	22647136	chr21:22647136:M	TTTTCTTTTCTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:30:255,70,0	0/1:16,11:29:128,0,194	1/1:0,17:19:255,55,0
-chr21	22651065	chr21:22651065:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,7:21:255,122,82,114,0,76	1/2:0,12,4:18:255,76,29,201,0,153	2/2:0,0,18:22:255,255,255,55,44,0
-chr21	22651693	chr21:22651693:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,13:16:135,27,0	0/1:14,7:22:21,0,98	0/1:9,6:19:34,0,58
-chr21	22651706	chr21:22651706:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTGTGTGTGTGT	<31.5>,<67.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,0,7:10:96,69,63,27,0,8	0/1:3,3,1:9:86,0,60,86,65,158	2/2:0,0,3:4:38,38,38,8,8,0
-chr21	22651754	chr21:22651754:M	TATATATATATATGTATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,2:2:25,6,0	0/0:10,1:11:0,21,255	1/1:0,3:3:37,8,0
-chr21	22651784	chr21:22651784:M	TGTGTGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,7:7:85,19,0	0/0:13,1:14:0,30,255	1/1:0,3:3:37,8,0
-chr21	22651794	chr21:22651794:M	TATATATATATATA	<5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,3,2:6:53,0,10,41,1,70	0/0:12,0,1:13:0,36,255,26,255,255	2/2:0,0,3:3:37,37,37,8,8,0
-chr21	22651807	chr21:22651807:M	ACACACACACACA	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:47,11,0	0/0:10,2:12:0,12,247	1/1:0,4:4:47,11,0
-chr21	22651863	chr21:22651863:M	ATATATATATA	<4.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,2:6:90,23,11,79,0,194	0/1:13,3,1:17:8,0,190,45,223,255	1/2:0,5,3:8:115,33,18,96,0,241
-chr21	22651885	chr21:22651885:M	ATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,1:18:0,28,255	1/1:0,6:8:124,21,0	0/0:25,1:29:0,58,255
-chr21	22651933	chr21:22651933:M	GTGTGTGTGTGT	<5>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,3,7:10:110,74,65,44,0,54	0/1:7,2,1:10:3,0,77,19,92,220	1/2:0,6,3:9:103,31,14,88,0,141
-chr21	22651944	chr21:22651944:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,2:2:25,6,0	0/0:9,1:11:0,20,246	1/1:0,3:3:36,8,0
-chr21	22651959	chr21:22651959:M	ACACACACACACACACACACACACACACACATACACACA	<14>,<16>,<67.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,4,0,4:8:154,43,31,136,43,127,111,0,93,100	0/1:8,4,0,2:18:76,0,223,73,207,255,87,213,255,255	1/2:1,8,6,4:20:255,114,98,179,0,165,255,95,159,255
-chr21	22675107	chr21:22675107:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<12.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,11:17:255,9,0	1/1:0,13:17:255,43,0
-chr21	22675946	chr21:22675946:M	AAAAAAAAAAAAGAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,21:22:255,46,0	0/1:18,15:34:173,0,218	0/1:16,20:37:255,0,183
-chr21	22680392	chr21:22680392:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:4,26:31:255,10,0	1/1:1,29:31:255,73,0	1/1:3,32:35:255,49,0
-chr21	22702028	chr21:22702028:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,6,78	0/1:4,3:8:39,0,45	0/0:7,1:8:0,6,104
-chr21	22721717	chr21:22721717:M	TTATTATTATTATTATTATTATTATTATTATT	<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:9,10:20:219,0,193	0/0:17,0:17:0,51,255	0/1:10,12:22:255,0,211
-chr21	22742290	chr21:22742290:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:14:28,0,123	0/1:9,3:15:16,0,126	0/0:9,0:10:0,29,161
-chr21	22743177	chr21:22743177:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,60,0	1/1:1,29:34:255,65,0	1/1:0,25:31:255,78,0
-chr21	22771546	chr21:22771546:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,11:12:177,17,0	0/1:1,3:5:48,0,3	1/1:2,9:12:132,0,0
-chr21	22788715	chr21:22788715:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,3,12	1/1:0,5:9:195,24,0	0/0:1,0:1:0,3,31
-chr21	22794798	chr21:22794798:M	AAAGAGAAAGAGAAGGAGACGAGAGAGAGATAGATAGAGAGAGAGAGAGAGAGAAAGACAAAGAAAAAGAAAAAGAAAGAAAAAGA	<13>	.	.	Motif=AAAGAG	GT:AD:DP:PL	1/1:0,3:4:68,9,0	1/1:0,7:9:171,24,0	1/1:0,4:7:84,7,0
-chr21	22800510	chr21:22800510:M	TATATATACATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:4,9:16:239,0,110	0/0:15,0:21:0,63,255	0/1:12,5:19:116,0,255
-chr21	22800534	chr21:22800534:M	TTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,0,2:17:27,37,255,0,255,255	1/2:0,3,5:10:201,70,47,42,0,17	0/2:6,1,7:16:165,81,214,0,141,132
-chr21	22807992	chr21:22807992:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/0:21,1:25:0,52,255	0/0:21,1:23:0,50,255	0/1:16,8:24:70,0,212
-chr21	22810958	chr21:22810958:M	GAAGGAAGGAAAGAAGGAAGGAAGGGAGGGAGGGAGGGCAGAGAGAAAGAAGGAAGGGAGGAAGGAAGGAAGGAAG	<20>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,3:3:43,9,0	0/0:3,0:4:0,11,54	1/1:0,6:9:84,17,0
-chr21	22815228	chr21:22815228:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,35:36:255,255,255,106,108,0	1/2:1,21,16:39:255,255,255,255,0,255	2/2:1,0,38:39:255,255,255,96,114,0
-chr21	22817959	chr21:22817959:M	AGAGAGAGAGAGA	<8>,<9.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,18,8:26:255,145,68,255,0,247	0/1:17,20,8:46:255,0,169,154,156,255	1/1:1,23,4:34:255,75,0,255,24,255
-chr21	22825191	chr21:22825191:M	TATATATATATATATATATATATATATATAT	<7.5>,<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,25,20:45:255,255,225,255,0,255	0/2:5,1,17:24:255,255,255,0,123,87	1/2:0,19,22:41:255,255,255,255,0,211
-chr21	22825362	chr21:22825362:M	ACACACACACACACACACACACACACACACA	<16.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,15,10:28:255,255,232,253,0,255	0/2:11,0,8:21:188,223,255,0,198,255	1/2:1,14,10:25:255,247,220,229,0,255
-chr21	22825758	chr21:22825758:M	ACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,26:52:255,0,255	0/1:19,21:40:255,0,228	0/1:23,20:43:252,0,255
-chr21	22832286	chr21:22832286:M	AAAAAACAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:38:232,0,255	0/1:17,18:35:221,0,201	0/1:23,20:43:246,0,255
-chr21	22832328	chr21:22832328:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	0/1:26,22:49:255,0,255	1/1:1,39:40:255,100,0
-chr21	22834374	chr21:22834374:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,19:21:255,25,0	0/0:24,0:24:0,70,255	1/1:1,20:21:255,44,0
-chr21	22837419	chr21:22837419:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,13:26:112,0,66	0/1:8,14:28:129,0,46	0/0:15,2:17:0,22,162
-chr21	22845624	chr21:22845624:M	ATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,15:31:193,0,210	0/1:26,13:41:121,0,255	1/1:0,40:40:255,118,0
-chr21	22879455	chr21:22879455:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:9,0,27	0/1:7,2:11:13,0,98	1/1:0,8:10:158,29,0
-chr21	22886743	chr21:22886743:M	TATATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:10:105,26,0	.	.
-chr21	22889371	chr21:22889371:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,23:42:255,0,232	0/1:25,19:44:208,0,255	1/1:1,35:36:255,88,0
-chr21	22889807	chr21:22889807:M	GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTATGTGTATGTG	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,12:25:150,0,170	0/1:10,14:24:177,0,106	0/1:18,15:33:177,0,232
-chr21	22890571	chr21:22890571:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAA	<34>,<36>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,8,3,0:15:110,29,43,101,0,177,136,45,199,255	0/1:3,7,1,0:15:67,0,20,84,21,174,96,42,194,244	2/3:1,0,6,3:11:118,139,205,28,39,14,54,83,0,68
-chr21	22898463	chr21:22898463:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,20:30:255,0,101	0/1:14,14:29:175,0,166	1/1:0,25:26:255,76,0
-chr21	22899484	chr21:22899484:M	TCTATATATCTATCTATCTATCTATCTATCTATCTATCGATCTATCTATCTACCTATC	<15.5>,<16.5>,<17.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:3,6,3,0:12:65,0,1,19,0,66,67,28,95,177	1/2:0,5,6,0:11:151,65,36,43,0,25,120,51,55,142	1/3:5,6,0,5:18:126,69,84,67,68,140,9,0,108,153
-chr21	22902958	chr21:22902958:M	AAAAAAAAAAAAAAAAAAAGAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,93	0/0:1,0:1:0,3,17	0/1:2,5:7:65,0,14
-chr21	22903820	chr21:22903820:M	ATAGATAGATAGATAGATAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAG	<13.8>,<16.8>	.	.	Motif=ATAG	GT:AD:DP:PL	1/2:0,15,3:18:255,81,36,255,0,255	1/2:0,9,7:16:255,187,160,235,0,218	1/1:0,19,0:19:255,57,0,255,57,255
-chr21	22905669	chr21:22905669:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:0,37:37:255,109,0	1/1:0,28:28:255,83,0
-chr21	22906103	chr21:22906103:M	ATATATATATATATATATATAT	<11.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,17,0,6:30:210,148,121,159,78,255,87,0,255,255	1/2:2,7,10,0:21:214,178,165,14,0,166,131,115,211,255	1/3:0,9,0,9:25:241,202,189,139,99,255,49,0,220,255
-chr21	22924336	chr21:22924336:M	AAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:210,26,0	0/1:1,1:2:22,0,23	1/1:0,5:10:201,27,0
-chr21	22924349	chr21:22924349:M	ATATATATATATATATATATA	<11>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:10,0,10:21:199,199,245,0,85,196	0/2:2,0,0:5:6,10,22,0,17,38	1/2:1,4,7:12:170,131,117,25,0,69
-chr21	22935687	chr21:22935687:M	TTTTATTTTAT	<1.4>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,2:3:54,6,0	1/1:0,3:3:81,9,0	.
-chr21	22935695	chr21:22935695:M	TATATATATATATATATATATATATATATATCTAGTATATATA	<18.5>,<19.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/3:0,9,0,7:17:255,115,173,255,202,255,255,0,158,248	1/3:0,0,0,1:2:24,16,26,26,29,38,11,0,10,8	2/3:0,0,5,1:6:143,96,94,16,28,13,135,81,0,138
-chr21	22940332	chr21:22940332:M	TACATAGACTATATATATATATATACATATACA	<5.2>	.	.	Motif=TACATA	GT:AD:DP:PL	1/1:0,32:33:255,96,0	1/1:0,29:29:255,87,0	0/1:23,17:40:255,0,255
-chr21	22950542	chr21:22950542:M	TTTTTTTTTTTTTTT	<13>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,27:28:255,255,255,64,84,0	2/2:1,0,23:28:255,255,255,64,83,0	1/2:0,19,18:39:255,255,255,255,0,255
-chr21	22951905	chr21:22951905:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/0:30,0:32:0,91,255	0/1:13,27:43:255,0,121
-chr21	22952682	chr21:22952682:M	TGTGTGTGTGT	<3.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,39:39:255,117,0	0/1:19,13:32:255,0,255
-chr21	22952822	chr21:22952822:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<19.5>,<20.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,23,0:24:255,67,0,255,68,255	1/1:1,18,0:22:255,10,0,255,57,255	1/2:1,7,12:21:255,196,157,88,0,78
-chr21	22972340	chr21:22972340:M	ATATATACATATATATAT	<12.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,5,12,8:30:255,217,140,98,0,23,203,18,9,146	1/2:0,3,5,3:13:255,88,52,55,0,19,112,11,20,85	1/3:0,10,0,11:25:255,253,198,248,132,189,215,0,109,162
-chr21	22972357	chr21:22972357:M	TTTTTTTTTTTTTTTT	<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,9,7:20:255,177,163,117,0,233	0/2:6,0,5:12:112,129,197,0,84,144	1/1:1,23,0:31:255,65,0,255,84,255
-chr21	22976433	chr21:22976433:M	TAGATAGATAGATAGATAGATAGATAG	<9.8>,<10.8>	.	.	Motif=TAGA	GT:AD:DP:PL	1/2:0,14,10:24:255,179,110,250,0,182	2/2:0,0,16:16:255,255,255,48,47,0	1/1:0,19,0:19:255,57,0,255,56,255
-chr21	22977752	chr21:22977752:M	ACACACACACACACACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,12:31:123,0,220	0/1:15,8:23:68,0,186	0/1:13,7:20:63,0,167
-chr21	22991104	chr21:22991104:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,80,0	1/1:0,33:35:255,99,0	0/1:18,9:31:185,0,255
-chr21	23011953	chr21:23011953:M	AGAGAGACAGAGAGAGGAGGGAGAGAGAGAGAGAGAGGAGAGAG	<24>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,18:19:255,54,0	1/1:0,19:19:255,57,0	0/1:14,6:20:109,0,255
-chr21	23012986	chr21:23012986:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,8:16:112,0,48	0/1:6,2:8:10,0,79	0/1:4,3:8:38,0,47
-chr21	23016025	chr21:23016025:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,16:34:202,0,209	0/1:23,11:36:109,0,255	1/1:1,42:46:255,116,0
-chr21	23016132	chr21:23016132:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,13:41:127,0,255	0/1:14,18:32:230,0,157	0/1:24,24:48:255,0,255
-chr21	23017712	chr21:23017712:M	TTTTTTTTTTTGTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,10:24:255,255,223,255,0,255	1/2:0,16,11:30:255,255,255,255,0,255	0/1:17,10,0:28:239,0,255,255,255,255
-chr21	23019855	chr21:23019855:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,17:43:199,0,255	0/1:16,19:36:240,0,176	0/0:42,0:44:0,129,255
-chr21	23020514	chr21:23020514:M	AAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,10:24:76,0,92	0/1:19,6:30:7,0,194	0/0:32,0:37:0,91,255
-chr21	23021316	chr21:23021316:M	CCCCCCCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	2/2:0,0,3:3:94,56,48,9,9,0	1/1:0,5,0:6:175,18,0,106,17,90	2/2:0,0,4:6:138,76,62,16,4,0
-chr21	23022631	chr21:23022631:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,42:43:255,108,0	1/1:0,46:46:255,135,0	0/1:19,23:42:255,0,231
-chr21	23028073	chr21:23028073:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,6,8:14:255,116,98,103,0,63	1/2:0,9,4:14:255,55,26,156,0,120	0/1:7,6,0:13:130,0,159,100,117,183
-chr21	23029660	chr21:23029660:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:34,0,25	.	1/1:0,3:3:50,9,0
-chr21	23032661	chr21:23032661:M	TTTGTTTTTCTGTTTTTTGTTTGTTTGTTTGTTT	<6.5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:2,0:4:0,12,76	0/1:3,3:11:79,0,69	1/1:0,4:4:90,12,0
-chr21	23032878	chr21:23032878:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,1,15:24:224,209,255,0,101,63	0/2:10,1,13:24:169,175,255,0,156,106	1/2:0,20,13:33:255,199,139,255,0,255
-chr21	23033778	chr21:23033778:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:35,15:50:133,0,255	0/0:44,0:44:0,129,255	0/0:52,1:53:0,138,255
-chr21	23036584	chr21:23036584:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,3,6:19:120,60,181,0,122,221	0/2:9,1,6:18:119,87,215,0,156,231	1/2:0,4,8:12:255,141,108,60,0,36
-chr21	23055398	chr21:23055398:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,34:34:255,100,0	0/1:9,27:36:255,0,60
-chr21	23055425	chr21:23055425:M	AGAAAAGAAAAAAAA	<2.8>	.	.	Motif=AGAAA	GT:AD:DP:PL	1/1:0,32:32:255,94,0	1/1:0,32:33:255,97,0	1/1:1,28:30:255,61,0
-chr21	23056893	chr21:23056893:M	CTTTCTTTCTTTCTTT	<5>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:17,0:17:0,47,217	0/0:18,0:18:0,50,224	0/1:8,11:20:95,0,45
-chr21	23056906	chr21:23056906:M	TTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:33,3,0	1/1:0,3:5:92,9,0	0/1:11,2:13:22,0,255
-chr21	23062061	chr21:23062061:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:132,15,0	1/1:0,5:6:139,7,0	0/1:7,3:11:56,0,192
-chr21	23064939	chr21:23064939:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:13:0,38,217	0/0:16,1:19:0,39,255	0/1:3,3:9:26,0,53
-chr21	23071073	chr21:23071073:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,50:51:255,132,0	1/1:0,36:36:255,106,0	1/1:0,45:45:255,133,0
-chr21	23072542	chr21:23072542:M	TTTTTTTTTTTTTTT	<16>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,15,0:20:255,227,182,43,21,0,245,180,40,222	1/2:1,7,5,0:13:170,54,31,63,0,70,148,55,104,221	2/3:0,0,8,6:14:255,252,222,84,82,43,110,89,0,71
-chr21	23074392	chr21:23074392:M	AAATTAAATTAATAAATTAAATTATTATTAATTAATTAAATTA	<7.8>	.	.	Motif=AAATT	GT:AD:DP:PL	1/1:0,20:25:255,62,0	1/1:0,10:12:255,31,0	1/1:0,11:14:255,33,0
-chr21	23081511	chr21:23081511:M	TTTGTTTGTTTGCTTGTTTGTTTTTTGT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/0:27,0:27:0,81,255	0/1:19,18:37:255,0,255
-chr21	23083054	chr21:23083054:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:34:0,100,255	0/0:30,0:31:0,91,255	0/1:19,22:43:255,0,240
-chr21	23086950	chr21:23086950:M	TTTTTCTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:29:0,84,255	0/0:18,0:19:0,55,255	0/1:15,11:27:105,0,182
-chr21	23087957	chr21:23087957:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,93,0	1/1:2,24:28:255,46,0	1/1:1,40:43:255,108,0
-chr21	23088060	chr21:23088060:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:45,1:46:0,117,255	0/1:16,14:30:168,0,206
-chr21	23098465	chr21:23098465:M	ACACACACACATACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:39,0:39:0,115,255	0/1:15,19:34:255,0,183
-chr21	23101985	chr21:23101985:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,63,0	1/1:0,14:16:255,42,0	0/1:10,8:23:167,0,209
-chr21	23105277	chr21:23105277:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,48:49:255,144,0	1/1:0,28:30:255,87,0	0/1:24,26:51:255,0,255
-chr21	23107329	chr21:23107329:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:38,0:38:0,112,255	0/1:21,27:48:255,0,253
-chr21	23115298	chr21:23115298:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,26:28:255,83,0	1/1:0,28:32:255,94,0
-chr21	23125620	chr21:23125620:M	TTTTTCTTTTTTTTTGTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,19:28:255,0,91	1/1:1,36:37:255,91,0	0/1:21,25:46:255,0,255
-chr21	23128903	chr21:23128903:M	TTTTGTTTTTATTTTGTTTTGTTTTGTTTTGTTTTTGTTTT	<10.2>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:15,8:23:145,0,255	1/1:0,20:20:255,60,0	0/1:8,7:15:145,0,170
-chr21	23139975	chr21:23139975:M	AAAAAAATAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,10:27:112,0,244	1/1:0,39:39:255,115,0	0/1:16,24:41:255,0,186
-chr21	23151602	chr21:23151602:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,3:12:19,0,118	0/0:18,0:20:0,58,255	0/1:11,4:17:21,0,165
-chr21	23169907	chr21:23169907:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,14:38:153,0,255	1/1:0,34:35:255,102,0	0/1:28,13:41:118,0,255
-chr21	23173559	chr21:23173559:M	TATATATATATATATATATATATA	<14>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:13:233,24,0	1/1:0,0:2:30,6,0	1/1:0,3:5:88,9,0
-chr21	23198691	chr21:23198691:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGTTTTTGTGTGTGTGTG	<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,9:13:212,0,69	1/1:0,22:22:255,66,0	0/1:8,9:18:208,0,164
-chr21	23198925	chr21:23198925:M	AACAACAACAACAA	<3.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:17,22:39:255,0,255	1/1:0,34:34:255,102,0	0/1:18,20:38:255,0,255
-chr21	23204441	chr21:23204441:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<20>,<23>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,6,3:9:219,74,56,145,0,136	1/1:0,1,0:1:28,3,0,28,3,28	.
-chr21	23222767	chr21:23222767:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:29:255,85,0	1/1:0,24:24:255,70,0	1/1:3,26:32:255,40,0
-chr21	23225544	chr21:23225544:M	TATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,37:38:255,102,0	1/1:0,19:19:255,57,0	1/1:0,28:28:255,84,0
-chr21	23226847	chr21:23226847:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:33:185,0,240	1/1:0,40:40:255,118,0	0/1:17,29:47:255,0,183
-chr21	23231341	chr21:23231341:M	GCTAAGCTAAG	<1.8>	.	.	Motif=GCTAA	GT:AD:DP:PL	0/1:19,24:43:255,0,255	0/0:49,0:49:0,147,255	0/1:16,27:43:255,0,255
-chr21	23242236	chr21:23242236:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<13>,<14>,<16>	.	.	Motif=AG	GT:AD:DP:PL	1/3:0,12,5,4:22:255,48,53,108,20,83,255,0,68,255	2/3:0,0,16,6:23:255,222,253,59,105,48,255,152,0,241	1/2:0,13,12,5:33:255,101,85,104,0,55,255,34,51,255
-chr21	23242269	chr21:23242269:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,5:16:84,0,231	1/1:0,19:26:255,44,0	0/1:12,4:20:65,0,255
-chr21	23243414	chr21:23243414:M	TATATTTATATGTGTAAATGTATATATATATTTATATGTGTAAATGTATATATATATTTATAT	<2.2>,<6.2>	.	.	Motif=TATATT	GT:AD:DP:PL	1/2:1,9,4:24:255,153,124,255,0,255	1/2:0,1,3:6:164,94,85,70,0,60	1/2:3,5,6:20:255,173,210,223,0,255
-chr21	23257660	chr21:23257660:M	ATATATATATA	<4.5>,<7.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,1,20:25:255,255,255,45,32,0	1/2:0,11,17:33:255,255,255,113,0,192	2/2:0,1,15:21:255,255,255,35,35,0
-chr21	23257670	chr21:23257670:M	ACACACACACACACACACACACACACACACACACACACACACACATATACACACACACATATATATACACACACACACACACACACA	<41.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:6:96,15,0	1/1:0,3:4:61,9,0	0/1:0,0:1:0,0,0
-chr21	23266223	chr21:23266223:M	ACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:3,19:22:255,15,0	1/1:1,24:25:255,57,0	1/1:0,8:9:130,23,0
-chr21	23273075	chr21:23273075:M	ATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	1/1:5,36:41:255,26,0	1/1:2,48:51:255,114,0	1/1:1,48:50:255,129,0
-chr21	23274906	chr21:23274906:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12,0:14:209,23,0,244,39,255	1/1:0,11,0:13:209,37,0,239,38,255	1/2:4,4,7:15:90,61,161,10,0,82
-chr21	23275272	chr21:23275272:M	GTGCACGTGCAC	<1.7>	.	.	Motif=GTGCAC	GT:AD:DP:PL	1/1:0,9:9:234,27,0	1/1:0,14:14:255,42,0	0/1:19,5:24:58,0,255
-chr21	23275281	chr21:23275281:M	CACACACACACACACACACACACACACACACACACACGCACA	<15>,<17>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,42:45:255,255,255,135,129,0	2/2:0,0,26:26:255,255,255,78,78,0	1/2:0,17,16:34:255,255,255,255,0,255
-chr21	23282834	chr21:23282834:M	TTATTTTATTTTTTTTA	<3.6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:39,0:39:0,117,255	0/0:18,0:18:0,54,255	0/1:20,18:38:255,0,255
-chr21	23284448	chr21:23284448:M	ACACACACACACACACACACACACACACA	<12.5>,<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39,2:42:255,118,0,255,87,255	1/1:0,39,2:42:255,120,0,255,90,255	1/2:1,22,13:38:255,156,111,255,0,254
-chr21	23286586	chr21:23286586:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:39:255,95,0	1/1:1,44:45:255,115,0	1/1:0,43:44:255,129,0
-chr21	23291206	chr21:23291206:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:12:86,0,34	1/1:1,7:8:98,7,0	1/1:1,4:6:58,0,0
-chr21	23296677	chr21:23296677:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/0:26,3:29:0,32,255	0/1:20,30:50:255,0,222
-chr21	23297320	chr21:23297320:M	TAGGTAGGTAGGTAGGTAGGTAGGTAGGTAG	<6.8>	.	.	Motif=TAGG	GT:AD:DP:PL	1/1:0,28:29:255,83,0	1/1:1,30:34:255,80,0	1/1:0,19:26:255,63,0
-chr21	23297348	chr21:23297348:M	TAGATAGATAGATAGATAGAAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGAT	<16.8>,<19.8>	.	.	Motif=TAGA	GT:AD:DP:PL	0/2:5,0,4:9:81,98,166,0,77,108	0/0:16,0,0:17:0,49,254,48,255,255	1/2:0,5,6:11:205,147,138,76,0,110
-chr21	23298313	chr21:23298313:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:13:179,20,0	1/1:1,10:12:161,18,0	0/1:8,8:19:107,0,86
-chr21	23299937	chr21:23299937:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:1,38:41:255,102,0	1/1:2,29:32:255,58,0
-chr21	23302016	chr21:23302016:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:15:0,43,252	0/1:4,3:8:38,0,45	0/1:4,4:10:62,0,41
-chr21	23302187	chr21:23302187:M	TTTTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:175,21,0	1/1:0,6:6:179,18,0	1/1:0,9:9:255,27,0
-chr21	23313960	chr21:23313960:M	ATGTATGTATGTATGTATGTATGTATGTATGTAT	<9.5>	.	.	Motif=ATGT	GT:AD:DP:PL	0/0:11,2:23:0,30,168	0/1:7,6:17:25,0,63	0/1:6,10:22:67,0,39
-chr21	23313991	chr21:23313991:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTGTCTGTCTAGCTATC	<15.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:8,6:14:106,0,162	1/1:0,18:18:255,54,0	0/0:14,0:14:0,42,255
-chr21	23317226	chr21:23317226:M	ATATTATATTATATTATATTATA	<7.6>,<8.6>	.	.	Motif=ATATT	GT:AD:DP:PL	1/2:0,10,12:22:255,231,170,193,0,131	2/2:0,0,3:3:90,63,55,9,9,0	0/1:24,9,0:33:169,0,255,168,255,255
-chr21	23317324	chr21:23317324:M	ACACACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:26,2:28:0,44,255	0/0:23,1:24:0,52,255	0/1:8,13:21:178,0,85
-chr21	23319544	chr21:23319544:M	ATATATATATATGTATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,51:51:255,150,0	1/1:0,42:42:255,124,0
-chr21	23337081	chr21:23337081:M	CTCTTCTCTCTCTCTCTCTCTGTCTTTCTCTCT	<15.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,23:25:255,66,0	1/1:0,35:41:255,103,0	1/1:0,39:43:255,112,0
-chr21	23344054	chr21:23344054:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:9:122,9,0	0/1:3,2:6:19,0,35	1/1:0,4:5:69,12,0
-chr21	23347928	chr21:23347928:M	ATATATATATATATATATATATATA	<10.5>,<14.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:1,9,2,11:26:255,255,255,255,129,255,218,0,239,230	1/2:0,15,2,0:18:255,47,6,255,0,255,255,26,255,255	2/3:0,0,7,7:14:255,255,255,96,96,54,94,96,0,54
-chr21	23348086	chr21:23348086:M	GTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,8:19:196,0,253	0/1:11,10:24:255,0,238	0/0:23,0:24:0,72,255
-chr21	23349529	chr21:23349529:M	ATATATATATACATATATATATACACACATATATAATATAAATATATATTTATAATTATATAAATATATA	<5>,<21.5>,<22.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,2,5,6:14:248,198,217,62,34,55,48,20,0,41	1/2:1,3,3,0:7:123,48,64,53,0,69,94,41,78,111	1/3:0,2,0,10:12:255,246,240,191,140,163,51,0,49,21
-chr21	23350532	chr21:23350532:M	TATATTTATAGTTATATGAATATATCTAATATATATTTATAGTTATAT	<2.8>	.	.	Motif=TATATT	GT:AD:DP:PL	0/1:8,13:21:255,0,129	.	0/1:2,5:7:123,0,27
-chr21	23355503	chr21:23355503:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,56,0	1/1:2,9:12:130,1,0	1/1:0,16:17:255,50,0
-chr21	23356968	chr21:23356968:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,1:12:0,6,208	0/0:11,1:15:0,5,255	0/1:12,5:19:82,0,252
-chr21	23367655	chr21:23367655:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:17,1,13,0:31:255,220,255,0,255,255,248,255,255,255	1/2:0,10,12,0:22:255,210,146,176,0,111,255,177,174,255	0/3:5,1,0,13:19:184,205,255,188,255,255,0,63,79,37
-chr21	23371763	chr21:23371763:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<25>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:11,17,56,0,17,11	1/2:0,4,3:8:162,49,70,122,0,113	0/2:1,0,0:3:16,21,51,0,17,8
-chr21	23385554	chr21:23385554:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,43:43:255,127,0	1/1:0,55:55:255,162,0
-chr21	23388243	chr21:23388243:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:31:0,90,255	0/1:15,10:25:228,0,255	0/0:33,1:42:0,87,255
-chr21	23396673	chr21:23396673:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:18,0,4:22:49,73,255,0,255,255	0/0:35,1,0:36:0,88,255,105,255,255	1/2:0,16,14:30:255,253,170,250,0,208
-chr21	23401019	chr21:23401019:M	AAAAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,16:29:243,0,82	0/0:33,3:36:0,53,255	1/1:1,20:22:255,46,0
-chr21	23401344	chr21:23401344:M	TTAAAATTAAAA	<1.3>	.	.	Motif=TTAAAA	GT:AD:DP:PL	0/1:15,5:20:56,0,255	0/0:20,1:22:0,43,255	0/0:17,0:18:0,54,255
-chr21	23404278	chr21:23404278:M	CTTTTCTTTTTCCTTTT	<2.2>	.	.	Motif=CTTTTC	GT:AD:DP:PL	0/1:22,15:37:255,0,255	0/1:19,6:25:79,0,255	0/1:18,11:29:189,0,255
-chr21	23404291	chr21:23404291:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,12:24:255,186,152,199,0,134	2/2:1,1,21:23:255,255,255,50,50,0	1/2:1,15,14:30:255,193,173,250,0,181
-chr21	23404753	chr21:23404753:M	AACAAACAAACAAACAAACAAACAAACAAAACAAACAAACAAAAAACCAAAGCCAAAACAAACAAACAAACAAAAAACA	<18.8>	.	.	Motif=AACA	GT:AD:DP:PL	1/1:0,11:11:211,33,0	1/1:0,10:10:180,29,0	1/1:0,18:18:255,53,0
-chr21	23418946	chr21:23418946:M	AAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,22:33:255,0,108	0/0:27,0:28:0,82,255	0/1:11,9:21:110,0,139
-chr21	23419977	chr21:23419977:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,16:19:255,1,0	0/1:2,1:3:16,0,43	1/1:0,9:9:236,27,0
-chr21	23424170	chr21:23424170:M	AATAATAATAATAATAATAATAATAATAATAATAATAATA	<10.3>,<12.3>,<15.3>	.	.	Motif=AAT	GT:AD:DP:PL	1/3:0,10,0,8:18:255,222,195,255,225,255,255,0,255,255	1/1:0,11,0,0:11:255,33,0,255,33,255,255,33,255,255	2/3:0,0,13,6:19:255,255,255,165,169,130,237,255,0,255
-chr21	23428356	chr21:23428356:M	AAAAAAAAAAAAAAAAAAACAAAAAAAAA	<23>,<28>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:3:47,54,74,9,9,0	1/2:0,11,6:17:255,98,124,255,0,255	.
-chr21	23430740	chr21:23430740:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<17.5>,<22.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,6,1,5:13:255,255,255,121,136,115,255,255,111,255,157,170,0,145,155	0/1:3,9,0,1,2:15:220,0,66,233,93,255,220,24,255,245,181,40,255,205,255	2/3:0,0,10,8,0:18:255,255,255,97,215,185,255,255,0,240,255,255,215,255,255
-chr21	23436375	chr21:23436375:M	CACACACATGCACACACACACACACACACACACACACAC	<18.5>,<22.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,4,3:8:170,164,163,30,20,14,41,31,0,25	2/3:0,0,1,1:2:51,52,53,11,11,5,11,11,0,5	1/3:1,3,0,3:8:104,82,83,64,42,124,22,0,92,82
-chr21	23436417	chr21:23436417:M	ATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:11:138,26,0	1/1:0,1:2:15,3,0	1/1:0,1:2:15,3,0
-chr21	23436626	chr21:23436626:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTCTCTCCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	<33.5>,<35.5>	.	.	Motif=TC	GT:AD:DP:PL	0/2:5,0,4:9:43,68,173,0,72,60	1/2:0,3,2:7:84,32,35,66,0,85	0/0:4,0,0:4:0,12,68,12,68,68
-chr21	23437627	chr21:23437627:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,24:49:255,0,255	0/1:20,22:43:255,0,255	0/1:18,20:42:255,0,255
-chr21	23439124	chr21:23439124:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,34:39:255,77,0	1/1:1,35:39:255,94,0	0/1:17,20:38:255,0,191
-chr21	23439503	chr21:23439503:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,84,0	1/1:0,45:46:255,138,0	0/1:10,21:34:255,0,182
-chr21	23441622	chr21:23441622:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,3,6:9:241,238,236,102,102,77,52,52,0,25	2/3:0,0,5,9:15:255,255,255,156,156,115,83,83,0,39	1/3:0,5,2,6:14:255,182,163,211,67,185,148,0,110,124
-chr21	23447303	chr21:23447303:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,26:52:255,0,255	0/1:26,18:45:187,0,255	1/1:2,35:38:255,75,0
-chr21	23449337	chr21:23449337:M	TATTTATTTATTT	<2.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/0:54,0:54:0,160,255	0/0:35,0:35:0,103,255	0/1:26,19:45:234,0,255
-chr21	23450276	chr21:23450276:M	ATATATATATATATATATATGTATAT	<15>,<19>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,16,9:27:255,241,201,255,0,255	1/2:0,6,1:8:198,40,22,163,0,163	2/2:0,0,2:3:62,62,62,6,6,0
-chr21	23457242	chr21:23457242:M	AAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:90,0,8	0/1:3,9:13:189,0,37	1/1:1,9:10:200,4,0
-chr21	23457561	chr21:23457561:M	TTTTTTTTTTTTTT	<13>,<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,10,0,3:15:255,124,94,255,124,255,183,0,255,255	1/3:2,22,0,6:32:255,153,115,255,184,255,255,0,255,255	2/3:1,0,12,5:19:255,255,255,160,176,140,196,255,0,255
-chr21	23469329	chr21:23469329:M	AAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:17:83,0,102	0/0:12,0:14:0,38,217	1/1:2,14:16:214,11,0
-chr21	23470007	chr21:23470007:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:17,10:28:91,0,224	0/0:25,3:28:0,28,255
-chr21	23475349	chr21:23475349:M	ATATATATATATATATATATATATATATATAT	<10>,<25>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:6:111,111,111,11,11,0	.	1/1:0,14,0:15:255,45,0,255,45,255
-chr21	23477802	chr21:23477802:M	TGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<10.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,2,33:35:255,255,255,103,65,0	1/2:0,8,12:20:255,182,158,142,0,86	2/2:0,0,24:24:255,255,255,71,71,0
-chr21	23486142	chr21:23486142:M	CAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAAAAAACCAAAACA	<9.4>	.	.	Motif=CAAAA	GT:AD:DP:PL	0/1:6,10:21:113,0,39	0/0:18,0:24:0,51,255	1/1:0,22:25:255,63,0
-chr21	23490881	chr21:23490881:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:5:106,29,20,52,0,38	1/2:0,1,4:5:81,55,52,17,0,2	1/1:0,2,0:5:80,12,0,62,12,56
-chr21	23493519	chr21:23493519:M	TTGTCTTGTCTTG	<1.6>	.	.	Motif=TTGTC	GT:AD:DP:PL	0/1:11,25:36:255,0,202	0/0:25,0:25:0,75,255	1/1:0,47:47:255,141,0
-chr21	23501439	chr21:23501439:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:26:124,0,177	0/0:24,2:27:0,34,255	1/1:0,24:26:255,73,0
-chr21	23501644	chr21:23501644:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,17:46:188,0,255	0/0:39,3:42:0,69,255	1/1:1,22:23:255,49,0
-chr21	23502144	chr21:23502144:M	TGTGTGGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGT	<27>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,11:25:151,0,111	0/0:16,0:20:0,53,255	0/1:7,6:19:75,0,90
-chr21	23509554	chr21:23509554:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<21>,<23>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,0,11,0:23:129,194,255,0,180,147,195,255,213,255	0/3:7,0,0,5:12:113,134,232,130,229,226,0,118,118,180	1/2:0,17,10,0:27:255,171,211,255,0,255,255,255,255,255
-chr21	23512654	chr21:23512654:M	ATATATATATATATATATATATATATATATATTATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,6:7:82,17,0	.	1/1:0,1:1:14,3,0
-chr21	23521581	chr21:23521581:M	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT	<12.7>,<15.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:12,5,0:17:98,0,255,135,224,255	0/2:1,0,3:4:42,53,107,0,18,6	0/1:9,6,0:16:134,0,219,165,167,255
-chr21	23536884	chr21:23536884:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:17:0,29,240	0/0:16,1:20:0,38,255	0/1:13,15:28:177,0,143
-chr21	23538512	chr21:23538512:M	AAATAAATAAAATAAATAAAT	<5.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:1,37:39:255,78,0	1/1:1,30:34:228,59,0	0/1:20,13:34:24,0,87
-chr21	23548261	chr21:23548261:M	AGAAAAAGAAAAAAAAAAAGA	<3.7>	.	.	Motif=AGAAAA	GT:AD:DP:PL	0/0:26,2:29:0,41,255	0/1:18,13:31:197,0,255	0/0:28,0:29:0,85,255
-chr21	23559406	chr21:23559406:M	AAACAAACAAACAAACAAACAAACAAACAAAAAAC	<7.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:15,10:25:120,0,217	1/1:0,28:28:255,82,0	0/0:17,0:17:0,50,255
-chr21	23559955	chr21:23559955:M	TTTTTATTTGTTTTTTTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,21:40:255,255,255,255,0,255	2/2:0,0,34:39:255,255,255,114,102,0	1/1:2,35,0:39:255,78,0,255,111,255
-chr21	23560837	chr21:23560837:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	1/1:0,3:5:130,15,0	1/1:0,0:1:12,3,0
-chr21	23561169	chr21:23561169:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28,0:29:255,67,0,255,84,255	1/1:0,26,0:26:255,76,0,255,78,255	1/2:2,14,15:31:255,238,255,221,0,255
-chr21	23565159	chr21:23565159:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:147,0,166	1/1:0,34:39:255,113,0	0/0:32,6:38:0,4,255
-chr21	23565494	chr21:23565494:M	TGTGTGTGTGTGTGTATGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,10:20:187,0,105	0/0:6,0:6:0,18,128	0/1:9,2:11:10,0,160
-chr21	23565524	chr21:23565524:M	TATATATATATATATATATATATATATATATATATATAT	<13.5>,<17.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,5,3:11:255,86,114,190,0,169	0/0:0,0,0:2:0,3,12,3,12,12	0/1:2,1,0:5:32,0,85,21,22,48
-chr21	23574675	chr21:23574675:M	TATCTATCTATCTATATCTATCTATCTATCTATCTATCTATCTATC	<12.5>,<16.5>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,8:20:255,214,178,228,0,255	0/1:10,7,0:17:77,0,132,126,180,255	0/2:9,0,8:17:188,215,255,0,167,218
-chr21	23580505	chr21:23580505:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:19:191,0,17	0/0:18,2:21:0,28,255	1/1:3,18:22:255,12,0
-chr21	23584980	chr21:23584980:M	AAAAAAAAAAAAAAGAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,5:21:29,0,222	0/1:3,9:12:120,0,16	0/1:8,8:16:95,0,95
-chr21	23595926	chr21:23595926:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,19:36:244,0,197	0/0:32,3:37:0,55,255	0/1:16,16:35:204,0,195
-chr21	23601984	chr21:23601984:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:17,3,0	0/0:8,0:9:0,26,148	0/1:2,5:7:64,0,13
-chr21	23603142	chr21:23603142:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,6:21:41,0,199	0/0:39,0:39:0,114,255	0/1:20,10:30:80,0,253
-chr21	23605499	chr21:23605499:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,23:49:255,0,255	0/0:44,0:45:0,135,255	0/1:18,16:37:255,0,255
-chr21	23610549	chr21:23610549:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<31>,<32>	.	.	Motif=T	GT:AD:DP:PL	0/2:2,3,5:13:140,28,32,0,4,20	1/2:0,5,4:13:188,48,30,34,0,17	0/2:1,0,0:8:18,14,26,0,17,17
-chr21	23611502	chr21:23611502:M	AATAATAATAATAATAATAA	<10.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:15,9:24:169,0,255	0/0:30,0:30:0,90,255	0/1:18,12:32:229,0,255
-chr21	23611935	chr21:23611935:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:50,9,0	0/1:1,1:2:10,0,10	0/0:0,0:1:0,0,0
-chr21	23619726	chr21:23619726:M	TTTATTTTATTTTATTTTATTTTATTTTTTTTTTTT	<6>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,15:18:255,53,0	0/1:4,6:11:136,0,84	0/1:5,8:16:195,0,99
-chr21	23624737	chr21:23624737:M	ATATATATATATATACACATATATATGGAGTATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,2:27:2,0,255	0/1:7,4:12:99,0,154	0/1:19,6:29:128,0,255
-chr21	23627991	chr21:23627991:M	TATATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,27:30:255,81,0	0/1:26,21:50:255,0,255	0/1:28,14:45:193,0,255
-chr21	23630930	chr21:23630930:M	TTGTTGTTGTTTTGTT	<4.7>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,23:28:255,66,0	0/1:21,18:39:106,0,140	0/1:16,11:30:70,0,108
-chr21	23634472	chr21:23634472:M	TTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,56,0	0/1:8,10:20:232,0,158	0/1:5,16:23:255,0,87
-chr21	23643392	chr21:23643392:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,42:45:255,95,0	0/1:23,23:48:255,0,255	0/1:16,23:40:255,0,186
-chr21	23651450	chr21:23651450:M	AAAAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,5:11:232,85,103,159,0,145	0/2:5,0,4:9:40,66,233,0,83,57	0/1:5,10,0:17:255,0,99,255,76,255
-chr21	23653615	chr21:23653615:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,8:17:219,135,192,109,0,151	0/1:7,8,0:18:116,0,70,159,102,255	0/2:14,1,6:21:46,87,255,0,192,199
-chr21	23653646	chr21:23653646:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,16,8:26:255,199,164,255,0,255	0/2:12,0,9:26:212,255,255,0,255,255	0/1:9,11,0:24:255,0,186,255,230,255
-chr21	23653673	chr21:23653673:M	TATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:16,13:32:230,0,255	1/1:1,22:28:255,50,0	0/1:16,9:29:144,0,255
-chr21	23655832	chr21:23655832:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,5:6:154,18,0	1/1:0,3:4:86,10,0
-chr21	23662030	chr21:23662030:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,29:46:255,0,164	0/0:43,2:47:0,102,255	0/1:21,22:44:255,0,253
-chr21	23671631	chr21:23671631:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:6:109,12,0	1/1:0,0:1:3,1,0	1/1:0,1:3:60,9,0
-chr21	23673860	chr21:23673860:M	TTTGTTTGTTTG	<3.2>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:13,13:29:49,0,63	0/1:20,19:44:68,0,102	0/0:23,0:25:0,61,222
-chr21	23675047	chr21:23675047:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:101,12,0	0/0:1,0:1:0,3,29	1/1:0,3:4:88,10,0
-chr21	23675412	chr21:23675412:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,26:54:255,0,255	0/0:50,0:51:0,150,255	0/1:23,22:45:255,0,255
-chr21	23676233	chr21:23676233:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,11:34:106,0,255	0/0:37,1:38:0,94,255	0/1:22,21:43:255,0,255
-chr21	23676759	chr21:23676759:M	AAACAAAAACAAAA	<2.5>	.	.	Motif=AAACAA	GT:AD:DP:PL	1/1:0,41:41:255,113,0	1/1:0,45:45:255,124,0	1/1:0,43:43:255,119,0
-chr21	23685841	chr21:23685841:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,18,16:34:255,255,255,255,255,204,255,255,0,243	1/2:0,31,14,0:45:255,250,118,255,0,255,255,212,255,255	3/3:0,0,0,35:35:255,255,255,255,255,255,103,105,103,0
-chr21	23689272	chr21:23689272:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:20,19:39:218,0,235	1/1:0,20:20:255,59,0
-chr21	23692049	chr21:23692049:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAA	<58>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0:11:0,32,194	0/1:3,1:4:5,0,39	0/1:1,3:4:40,0,6
-chr21	23693801	chr21:23693801:M	TTTTTTTCTTTTTTTCTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:39:0,117,255	0/1:17,16:33:255,0,255	0/0:38,0:38:0,114,255
-chr21	23697927	chr21:23697927:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:23:6,0,247	0/1:6,5:12:51,0,76	0/0:30,0:31:0,91,255
-chr21	23706889	chr21:23706889:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,27:30:255,33,0	1/1:1,32:33:255,79,0	1/1:0,38:39:255,114,0
-chr21	23722243	chr21:23722243:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:167,18,0	0/0:0,0:1:0,3,10	1/1:0,6:7:174,21,0
-chr21	23723516	chr21:23723516:M	TTTCTTTATTTCTTTTCTTTTCCTTTTTTTTTTTTCTTTCT	<10>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,21:22:255,64,0	1/1:0,24:26:255,73,0	1/1:0,22:24:255,69,0
-chr21	23729960	chr21:23729960:M	TTTTATTTTTTTATTTTTTATTTTTTATTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:14:111,0,73	0/0:16,2:18:0,17,250	1/1:0,24:25:255,64,0
-chr21	23730910	chr21:23730910:M	TTTATTTATTTATTTATTTATT	<6.5>,<7.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:9,21,0:30:255,0,87,255,173,255	0/0:33,0,0:33:0,97,255,99,255,255	1/2:0,18,25:43:255,255,255,255,0,215
-chr21	23741349	chr21:23741349:M	TTTTGTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,66,0	1/1:0,15:15:255,45,0	1/1:0,28:29:255,87,0
-chr21	23748118	chr21:23748118:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:18:255,50,0	1/1:0,17:21:255,54,0	1/1:0,23:25:255,69,0
-chr21	23754218	chr21:23754218:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,54:54:255,160,0	1/1:1,52:53:255,138,0	1/1:0,51:51:255,150,0
-chr21	23756750	chr21:23756750:M	CCCTCCCCCTCCCCC	<2.7>	.	.	Motif=CCCTCC	GT:AD:DP:PL	0/1:1,3:4:42,0,6	0/0:2,0:2:0,6,36	1/1:0,1:1:18,3,0
-chr21	23758057	chr21:23758057:M	AAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:112,12,0	1/1:0,7:8:200,23,0	.
-chr21	23758226	chr21:23758226:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:211,24,0	1/1:0,8:10:251,29,0	1/1:0,10:14:255,40,0
-chr21	23767163	chr21:23767163:M	ACACACACACACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,28:29:255,84,0	1/1:0,26:28:255,83,0
-chr21	23767798	chr21:23767798:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:8:171,23,0	1/1:0,12:15:255,44,0	1/1:0,13:16:255,45,0
-chr21	23769267	chr21:23769267:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:19:255,55,0	1/1:2,14:17:214,15,0	1/1:1,7:9:114,8,0
-chr21	23772296	chr21:23772296:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,34:36:255,69,0	1/1:0,26:27:255,70,0	1/1:0,28:29:255,85,0
-chr21	23776244	chr21:23776244:M	TTTTTTTTGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>,<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15,0:17:255,50,0,255,48,255	1/2:0,10,15:27:255,255,255,255,0,229	1/1:0,11,0:15:255,44,0,255,36,255
-chr21	23777141	chr21:23777141:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,45:49:255,106,0	0/1:21,23:46:255,0,244	1/1:1,34:36:255,87,0
-chr21	23779387	chr21:23779387:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26,1:28:255,64,0,255,64,255	1/1:0,23,0:23:255,67,0,255,67,255	1/2:0,13,8:22:255,134,82,188,0,173
-chr21	23782961	chr21:23782961:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:155,18,0	0/1:5,1:12:16,0,161	0/1:1,1:3:21,0,32
-chr21	23783661	chr21:23783661:M	ATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:3,42:45:255,76,0	0/1:23,11:34:98,0,255	1/1:1,39:40:255,99,0
-chr21	23796742	chr21:23796742:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>,<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:1,9,5:15:255,64,63,153,0,131	2/2:0,0,12:12:219,219,219,35,35,0	1/2:0,9,6:15:255,96,69,168,0,126
-chr21	23797911	chr21:23797911:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,32,0:32:255,96,0,255,96,255	1/2:0,10,5:15:255,90,105,255,0,251	1/1:0,18,0:18:255,54,0,255,54,255
-chr21	23797971	chr21:23797971:M	TTTTCTTTTTTTTCCTTTTTTCCTTTTTTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:87,15,0	0/1:4,3:7:30,0,46	1/1:1,8:9:120,9,0
-chr21	23798157	chr21:23798157:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:12:37,0,110	0/1:5,5:10:57,0,57	0/1:7,5:13:59,0,86
-chr21	23803677	chr21:23803677:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:92,17,0	1/1:0,3:4:39,2,0	0/1:2,3:5:35,0,18
-chr21	23803686	chr21:23803686:M	AAAGAAAGAAAGAAAGAAAAGAAA	<6.2>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,17:21:53,18,0	1/1:0,16:17:58,23,0	1/1:0,10:15:30,10,0
-chr21	23803777	chr21:23803777:M	TATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:3,25:30:255,40,0	0/1:4,8:12:83,0,24	1/1:0,15:16:224,43,0
-chr21	23805623	chr21:23805623:M	TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:2,36:38:255,75,0	0/1:18,10:29:92,0,241	1/1:2,29:32:255,55,0
-chr21	23806439	chr21:23806439:M	GAGAGAAAGAAAGAGAGAGAGGGAGAGAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,33:33:255,99,0	0/1:13,11:24:255,0,255	1/1:0,17:17:255,51,0
-chr21	23806476	chr21:23806476:M	GAAAGAAAGAAAGAAAAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<15>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,6:8:228,24,0	.	1/1:0,0:2:26,6,0
-chr21	23806571	chr21:23806571:M	AAGGAAGGAAGGAAGGAAGGAAGAAAACGAAGGAAGGAGGGAGGGAGAGAGGGAGGAAAAAAGAAAAAAGGAAGGAAGGAAGGAAAAGAAAGAAGGAAGG	<9>	.	.	Motif=AAGG	GT:AD:DP:PL	1/1:0,3:6:137,18,0	1/1:0,3:4:90,11,0	1/1:0,2:4:91,12,0
-chr21	23810815	chr21:23810815:M	AAAAAAAAAAAGAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:28:255,83,0	0/1:30,16:46:152,0,255	1/1:1,35:37:255,90,0
-chr21	23811329	chr21:23811329:M	GTGTTTGTGTGTGTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,20:25:255,74,0	0/1:30,16:55:255,0,255	1/1:0,34:40:255,117,0
-chr21	23814189	chr21:23814189:M	AAAAAACAAAAACAAAAACAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:37:255,88,0	0/1:24,7:33:6,0,228	1/1:0,32:36:255,90,0
-chr21	23814756	chr21:23814756:M	TATATATATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7,0:7:113,20,0,113,20,113	0/1:6,3,0:10:18,0,77,39,103,196	1/2:0,4,8:12:255,128,93,53,0,29
-chr21	23818534	chr21:23818534:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,1:17:0,32,255	0/0:18,0:18:0,53,255	0/1:12,5:17:38,0,161
-chr21	23818713	chr21:23818713:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:5:47,0,3	0/0:4,0:4:0,12,65	0/0:4,0:6:0,14,77
-chr21	23822338	chr21:23822338:M	AAAAAAAAACAAAAAACAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:32,0:32:0,94,255	0/1:13,12:25:150,0,168
-chr21	23823025	chr21:23823025:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,17:31:232,0,175	0/0:37,0:38:0,111,255	1/1:0,31:32:255,94,0
-chr21	23824022	chr21:23824022:M	TTTTATTTTCTTTTTCTTTTTTCTTTTTTCTTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:18:255,54,0	0/1:16,6:27:124,0,255	1/1:0,23:25:255,74,0
-chr21	23827547	chr21:23827547:M	TATGTGTGTATGTTTGTGTGTCTGTGTGTGTGTATGTAT	<10.2>	.	.	Motif=TATG	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:3,8:11:124,0,26	1/1:0,18:18:255,53,0
-chr21	23827583	chr21:23827583:M	TATATATATATATATATATAATATTTATAT	<18>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,20:23:255,47,0	0/1:5,3:9:50,0,112	1/1:0,14:15:255,34,0
-chr21	23830140	chr21:23830140:M	TTATTTATTTATTTATTTATTTA	<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,33:34:255,101,0	0/1:14,4:19:49,0,255	1/1:0,25:27:255,78,0
-chr21	23832333	chr21:23832333:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,36:42:255,83,0	0/1:17,20:39:255,0,183	1/1:0,28:30:255,85,0
-chr21	23836148	chr21:23836148:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,57,0	0/1:8,11:22:243,0,163	1/1:0,21:26:255,71,0
-chr21	23837002	chr21:23837002:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:49,0,48	0/0:14,1:18:0,31,236	0/0:11,0:11:0,32,192
-chr21	23837167	chr21:23837167:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:144,11,0	0/1:10,9:20:106,0,114	1/1:2,12:15:186,8,0
-chr21	23839400	chr21:23839400:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:17:198,4,0	0/1:15,7:23:63,0,192	1/1:1,22:23:255,50,0
-chr21	23846125	chr21:23846125:M	TGTTTTGTTTTTTTTGTTTT	<4.2>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:15,11:26:180,0,255	0/1:18,13:31:211,0,255	0/1:13,14:28:245,0,226
-chr21	23853857	chr21:23853857:M	AGAGAGAGAGAAAATGAGAGAGGGAGAGAGAGAGAGAGAGAGGAGAGAAGAGA	<25.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,20:22:255,64,0	0/1:13,15:28:187,0,151	1/1:0,14:14:255,41,0
-chr21	23858405	chr21:23858405:M	AAAAGAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:16:255,47,0	0/1:1,4:6:54,0,11	1/1:0,10:10:184,29,0
-chr21	23858427	chr21:23858427:M	ACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6:6:176,18,0	0/0:0,0:2:0,5,27	1/1:0,3:4:108,12,0
-chr21	23858457	chr21:23858457:M	ATATATATATATATATATATATATATATATATATATATATATATATATA	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,12:14:255,42,0	1/1:0,2:4:54,6,0	1/1:0,4:5:120,14,0
-chr21	23859435	chr21:23859435:M	ATTATAATTATATAAAATTATATATTTATAATTATA	<2>	.	.	Motif=ATTATA	GT:AD:DP:PL	0/1:4,3:7:83,0,85	0/0:0,0:1:0,0,0	.
-chr21	23860662	chr21:23860662:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,28,0:29:255,84,0,255,86,255	1/2:0,17,12:29:255,207,255,255,0,255	1/1:0,21,0:22:255,65,0,255,66,255
-chr21	23864699	chr21:23864699:M	ACACACACACACACACACACACACACACACACACACACACACAC	<20>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,14:24:151,181,255,0,156,88	0/1:10,11,2:25:231,0,214,139,133,235	0/2:5,1,10:17:119,112,241,0,71,41
-chr21	23865257	chr21:23865257:M	TATATATATATATATATA	<6>,<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:19,13,3:35:255,0,255,255,216,255	1/2:4,13,18:37:255,186,255,255,0,236	0/0:30,0,3:33:0,98,255,53,255,255
-chr21	23874464	chr21:23874464:M	AAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:10:66,0,114	1/1:0,4:6:128,15,0	0/0:11,0:11:0,33,255
-chr21	23891093	chr21:23891093:M	ATATATAAATATATATATATATATATATATATATATATATATATATATATATATATATAT	<16>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,18:22:255,57,0	1/1:0,7:8:209,24,0	.
-chr21	23892751	chr21:23892751:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>,<17>,<18>	.	.	Motif=ATT	GT:AD:DP:PL	1/2:0,6,9,0:15:255,169,233,165,0,140,255,169,167,255	1/1:0,7,0,0:7:210,21,0,213,21,218,213,21,218,218	2/3:0,0,7,3:10:191,212,255,55,56,26,109,129,0,100
-chr21	23896888	chr21:23896888:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTATCTATTTAACTATCTATCTA	<17.5>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:2,5:7:75,0,18	1/1:0,10:10:180,29,0	0/0:14,0:14:0,41,255
-chr21	23903804	chr21:23903804:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2,0:5:18,0,35,33,49,125	0/1:4,3,0:7:27,0,43,47,63,171	0/2:8,0,3:12:50,68,174,0,119,185
-chr21	23904757	chr21:23904757:M	TTTTTATTTTTATTTTTATTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:17:83,0,128	1/1:0,18:19:255,55,0	0/0:23,0:23:0,68,255
-chr21	23906360	chr21:23906360:M	TTATTTTATTTTATTTTATTTTATT	<6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:23,8:31:63,0,255	1/1:0,24:24:255,71,0	0/0:27,0:27:0,80,255
-chr21	23914137	chr21:23914137:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:8,0,25	.	1/1:0,4:4:67,12,0
-chr21	23919663	chr21:23919663:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:2,33:36:255,71,0	1/1:1,42:43:255,109,0
-chr21	23922844	chr21:23922844:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:27:255,58,0	1/1:2,27:31:255,53,0	1/1:0,32:34:255,99,0
-chr21	23924291	chr21:23924291:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:17,15:32:195,0,235	1/1:0,32:32:255,94,0	0/0:37,0:37:0,109,255
-chr21	23927858	chr21:23927858:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,93	1/1:0,6:6:106,18,0	0/1:9,2:11:4,0,130
-chr21	23948909	chr21:23948909:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:70,12,0	0/1:1,4:5:52,0,2	1/1:0,3:4:40,0,0
-chr21	23966637	chr21:23966637:M	CCCCCCCCCCCC	<13>	.	.	Motif=C	GT:AD:DP:PL	0/1:6,5:12:54,0,81	0/0:7,0:7:0,20,118	0/1:5,5:10:58,0,58
-chr21	23985888	chr21:23985888:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/0:27,2:30:0,51,255	0/1:14,13:32:150,0,186
-chr21	24006315	chr21:24006315:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,16,1,5:22:255,98,100,255,71,255,255,0,255,255	1/3:0,12,0,5:17:255,84,102,255,84,255,255,0,255,255	2/3:0,0,11,6:19:255,255,255,89,105,50,210,211,0,161
-chr21	24014707	chr21:24014707:M	TTGTTGTTGGGTTGTTGTTGTTGTTGTTTTGT	<9.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:12,20:32:255,0,123	0/1:20,23:43:255,0,249
-chr21	24018554	chr21:24018554:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:18,13:34:131,0,244	0/1:23,14:38:144,0,255
-chr21	24018856	chr21:24018856:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:26:0,77,255	0/1:16,8:26:153,0,255	0/1:15,10:28:199,0,255
-chr21	24034195	chr21:24034195:M	AACAACAACAA	<2.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:52,0:55:0,107,255	0/1:28,17:46:195,0,255	0/1:22,20:43:255,0,255
-chr21	24034667	chr21:24034667:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,81,255	0/1:28,26:54:255,0,255	0/1:13,30:43:255,0,116
-chr21	24034856	chr21:24034856:M	AATAAATAAATAAATAAATAA	<4.2>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/1:18,20:38:252,0,215	0/1:20,23:43:255,0,250
-chr21	24036151	chr21:24036151:M	AGACAAAGACAAAGA	<1.5>	.	.	Motif=AGACAA	GT:AD:DP:PL	0/0:32,0:35:0,81,255	0/1:19,17:38:205,0,242	0/1:17,18:37:248,0,206
-chr21	24042337	chr21:24042337:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,10:14:249,151,139,71,0,31	0/2:2,1,6:10:86,69,124,0,24,15	0/2:10,3,5:18:68,22,255,0,123,126
-chr21	24043471	chr21:24043471:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:14,14:31:172,0,162	0/1:14,19:35:255,0,149
-chr21	24045498	chr21:24045498:M	AAAAAAAAAAAAAAAAAA	<15>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19,0:21:255,62,0,255,62,255	0/1:5,10,0:19:251,0,123,255,109,255	1/2:0,11,6:19:255,103,122,255,0,255
-chr21	24047697	chr21:24047697:M	AAGAAAAAAAAAAAAAAGAAAAAGAAAAGAAA	<6.6>	.	.	Motif=AAGAA	GT:AD:DP:PL	0/1:6,10:17:161,0,82	0/0:8,1:10:0,8,153	0/1:11,6:18:73,0,184
-chr21	24049400	chr21:24049400:M	TATTTATTTATTTATTTATTTATTTA	<7.5>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:25,9:34:73,0,255	0/0:38,0:38:0,112,255	0/1:11,12:23:157,0,139
-chr21	24051269	chr21:24051269:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,13:25:164,0,146	1/1:2,18:23:255,29,0	0/1:15,10:26:103,0,201
-chr21	24051901	chr21:24051901:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,15:21:209,0,11	1/1:0,23:24:255,70,0	0/1:2,12:17:160,0,19
-chr21	24055340	chr21:24055340:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:25:111,0,194	1/1:2,27:31:255,53,0	0/0:24,0:27:0,78,255
-chr21	24055350	chr21:24055350:M	AACAACAACAAAAACAAACAAC	<5.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:4,1:5:8,0,88	0/1:28,2:37:27,0,255	1/1:1,12:14:255,16,0
-chr21	24061789	chr21:24061789:M	TTTTTCTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,20:38:255,0,225	1/1:2,28:34:255,63,0	0/1:19,17:36:203,0,241
-chr21	24076811	chr21:24076811:M	AGAGAGAGAGAGAGAGGAAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:11,16:29:255,0,211	0/0:22,0:23:0,69,255	0/1:18,11:31:217,0,255
-chr21	24081073	chr21:24081073:M	ATAACATAACA	<1.2>	.	.	Motif=ATAAC	GT:AD:DP:PL	0/1:17,24:41:255,0,211	0/0:22,0:22:0,65,255	0/1:24,29:53:255,0,255
-chr21	24093400	chr21:24093400:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21,1:41:255,0,240,255,255,255	0/0:38,0,0:40:0,117,255,120,255,255	0/2:19,6,11:38:224,105,255,0,255,255
-chr21	24096907	chr21:24096907:M	TCTCTCTCTCTCTCTCTCTCTCTCTC	<18>,<20>,<21>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,6,0:10:211,204,198,21,21,0,141,139,21,122	1/2:0,11,12,2:27:255,255,255,255,0,250,255,172,255,255	3/3:0,0,1,8:11:255,255,255,147,147,121,27,27,9,0
-chr21	24109572	chr21:24109572:M	TTTTTTTTTTTTTTTTT	<14>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,12,2,13:28:255,240,255,255,203,255,255,0,195,255	3/3:1,0,1,20:22:255,255,255,255,255,255,47,63,47,0	1/2:0,16,19,0:36:255,255,234,255,0,192,255,255,255,255
-chr21	24113576	chr21:24113576:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGA	<23>	.	.	Motif=AG	GT:AD:DP:PL	0/0:8,0:11:0,24,143	0/1:9,3:12:16,0,118	0/1:8,2:14:14,0,108
-chr21	24119044	chr21:24119044:M	TGTGTGTGTGTCTGTGTGTGTGTGTGTCTGTGTGTGCGTGCCTCTGTGTGTGTGTGTGTGTGTGT	<31.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:9,1:10:0,11,150	0/0:9,0:9:0,26,159	0/1:6,6:13:81,0,71
-chr21	24122103	chr21:24122103:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,11:31:121,0,242	0/0:34,4:41:0,49,255	0/1:18,18:41:232,0,224
-chr21	24126833	chr21:24126833:M	AAAAAAAAAAAAAAAGAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:23:255,0,178	0/0:26,1:30:0,56,255	0/1:10,10:20:205,0,210
-chr21	24129417	chr21:24129417:M	ACACACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,9:20:187,0,230	0/0:17,0:20:0,59,255	0/1:10,14:26:255,0,201
-chr21	24142240	chr21:24142240:M	AAAAAAAAAAAAACAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,26:30:255,37,0	1/1:1,27:29:255,68,0	1/1:0,33:36:255,101,0
-chr21	24157799	chr21:24157799:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:31,1:32:0,76,255	0/1:17,17:35:191,0,180	0/0:40,0:41:0,120,255
-chr21	24173632	chr21:24173632:M	AGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGACAGATAGATAGATAGGTATAGATAGAT	<11.2>,<18.5>,<19.5>,<20.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/2:0,5,5,0,4:14:204,93,126,83,0,103,140,28,82,126,149,26,30,96,130	1/4:0,1,0,0,5:6:79,66,130,92,119,137,79,66,92,79,26,0,27,26,12	1/3:0,2,2,4,0:10:187,120,119,100,27,83,74,0,46,56,147,74,89,73,133
-chr21	24175695	chr21:24175695:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,18:49:203,0,255	0/0:43,2:47:0,102,255	0/1:15,16:32:209,0,179
-chr21	24186995	chr21:24186995:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:14:0,23,212	0/1:8,9:19:105,0,89	0/0:18,2:22:0,9,255
-chr21	24203912	chr21:24203912:M	ACACACACACACACACACACACACACACA	<15.5>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:2,16,17:35:255,248,183,190,0,189	1/2:1,11,8:20:255,111,70,130,0,130	1/1:2,27,0:29:255,52,0,255,84,255
-chr21	24206789	chr21:24206789:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,0,3:8:207,78,61,136,50,114,128,0,84,119	1/2:0,5,6,1:13:255,105,72,83,0,56,213,66,74,202	3/3:0,0,0,4:5:135,132,129,92,92,80,15,15,14,0
-chr21	24210498	chr21:24210498:M	AAAACAAAACAAAACA	<4.4>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:22,18:40:255,0,255	0/1:22,22:44:255,0,255	0/0:53,0:53:0,159,255
-chr21	24214629	chr21:24214629:M	GAAAGAGATAAAGAGAAAGAAAGAGAAGGAGGGAGAGAGAAAGAGAAAG	<7.7>	.	.	Motif=GAAAGA	GT:AD:DP:PL	0/0:10,0:15:0,25,95	0/1:6,9:17:49,0,19	0/0:15,0:21:0,37,142
-chr21	24218390	chr21:24218390:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:7:32,0,50	1/1:0,3:3:50,9,0	0/1:2,2:5:29,0,20
-chr21	24222719	chr21:24222719:M	ACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,31:31:255,91,0	1/1:0,30:30:255,89,0
-chr21	24226730	chr21:24226730:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,0:52:0,152,255	0/1:28,23:53:255,0,255	0/1:21,19:40:232,0,255
-chr21	24229201	chr21:24229201:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:251,0,196	0/1:24,11:37:105,0,255	0/0:43,1:44:0,112,255
-chr21	24230523	chr21:24230523:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,14:22:199,0,63	0/1:13,14:27:162,0,145	1/1:0,18:19:255,55,0
-chr21	24235523	chr21:24235523:M	TATATATATATATATACTATATATGTATATATATATAT	<21>,<24>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,17,11:30:255,255,255,255,0,255	0/1:5,5,0:11:109,0,125,131,144,255	0/2:12,0,2:17:55,87,255,0,255,255
-chr21	24237613	chr21:24237613:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9,2:17:209,0,126,130,77,194	0/2:8,1,6:15:70,71,255,0,121,96	0/1:4,5,0:10:126,0,84,96,70,142
-chr21	24246457	chr21:24246457:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,18:21:255,25,0	0/1:11,4:15:25,0,146	1/1:2,17:19:255,20,0
-chr21	24250212	chr21:24250212:M	TGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:4,0,6:10:141,102,190,0,102,82	0/1:2,9,0:11:230,0,25,146,50,170	0/2:7,1,9:20:213,138,255,0,174,152
-chr21	24253627	chr21:24253627:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,1:48:0,123,255	0/1:20,17:37:195,0,248	0/0:59,0:59:0,174,255
-chr21	24257979	chr21:24257979:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/2:2,11,11:24:255,167,255,167,0,253	1/2:1,15,23:41:255,255,255,249,0,255	1/2:0,19,17:37:255,255,255,255,0,255
-chr21	24267083	chr21:24267083:M	AAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,26:26:255,78,0	.
-chr21	24271463	chr21:24271463:M	AGATAAATAGGTAGATAGATGATTGATTGATTGATAGATGGATAGATAGATAGATGATAGACAGATGATAGA	<20>	.	.	Motif=AGAT	GT:AD:DP:PL	0/1:4,2:6:33,0,84	0/0:13,0:13:0,39,255	0/1:8,5:14:85,0,166
-chr21	24273612	chr21:24273612:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:14:233,41,0	0/1:7,3:11:28,0,84	1/1:0,15:17:255,49,0
-chr21	24274643	chr21:24274643:M	TTTTTTTTTTTCTCTTTTTTGTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,0:17:0,41,255	0/1:11,6:19:114,0,243	0/0:11,0:13:0,29,255
-chr21	24277609	chr21:24277609:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,11:35:100,0,255	0/1:15,19:36:242,0,152	0/1:13,14:29:172,0,154
-chr21	24280683	chr21:24280683:M	TATATATATATATATATATATATAT	<13.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,15,12:29:255,193,131,206,0,197	0/2:1,1,2:4:50,19,25,0,3,20	1/1:1,6,0:9:89,4,0,72,2,93
-chr21	24287743	chr21:24287743:M	ATAATAATAATAATAATAATAATAAT	<6.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:12,4:18:38,0,211	1/1:0,8:10:170,24,0	0/0:18,1:19:0,35,255
-chr21	24287767	chr21:24287767:M	ATCATCATCATCATCATCAT	<9.7>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,29:33:255,98,0	1/1:0,27:28:255,83,0	1/1:0,32:37:255,108,0
-chr21	24292912	chr21:24292912:M	TGTTTTTGTTTTTTTTTT	<3.2>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/0:16,0:16:0,48,255	0/1:18,17:35:250,0,255	0/0:13,0:13:0,39,255
-chr21	24295450	chr21:24295450:M	AAAAAAACAAAAACAAAAACAAAACAAAACAAAAAAAA	<39>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:12:0,28,171	0/1:16,6:24:43,0,213	0/0:14,0:16:0,34,236
-chr21	24296135	chr21:24296135:M	TTTTTTCTTTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,15:19:227,9,0	1/1:0,13:16:182,12,0	1/1:0,9:13:154,15,0
-chr21	24302678	chr21:24302678:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,26,0:28:255,77,0,255,79,255	1/2:4,8,8:21:173,80,185,90,0,198	1/2:2,13,11:26:255,166,254,202,0,255
-chr21	24307116	chr21:24307116:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19:34:255,0,164	0/1:30,25:56:255,0,255	0/1:25,14:40:140,0,255
-chr21	24307538	chr21:24307538:M	TTTTTCTTTTTTTTTTTTTTTTTTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,0:3:16,20,36,0,14,9	1/1:0,3,0:4:49,9,0,56,8,82	2/2:0,0,4:6:90,102,141,17,18,0
-chr21	24310402	chr21:24310402:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,20,13:34:255,225,255,255,0,255	1/2:0,29,9:38:255,157,151,255,0,255	1/2:0,22,15:37:255,255,255,255,0,255
-chr21	24314168	chr21:24314168:M	AAATAAATAAATAAATAAATAAATAAATAAATAAAT	<8>,<10>	.	.	Motif=AAAT	GT:AD:DP:PL	0/2:7,0,9:16:132,178,255,0,117,89	1/2:0,7,7:14:217,127,186,129,0,208	0/2:9,0,10:20:134,191,255,0,148,118
-chr21	24315345	chr21:24315345:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:132,15,0	1/1:0,3:4:98,12,0	0/1:1,5:10:166,0,2
-chr21	24316096	chr21:24316096:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8,0:11:243,8,0,249,27,255	1/2:0,1,3:9:96,51,84,51,0,50	0/1:0,0,0:3:3,0,16,10,19,29
-chr21	24320424	chr21:24320424:M	AATAAATAAATAAATAAA	<3.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:22,20:42:244,0,255	1/1:0,41:41:255,121,0
-chr21	24322175	chr21:24322175:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,0,14:34:168,255,255,0,255,255	1/2:0,25,21:46:255,255,255,255,0,255	0/2:21,1,24:46:255,255,255,0,255,255
-chr21	24325234	chr21:24325234:M	ATATATATATATATATATATATATATATATATAT	<20.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,3:5:66,0,18	0/0:1,0:2:0,6,51	0/0:0,0:1:0,2,5
-chr21	24327928	chr21:24327928:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,25:29:255,46,0	1/1:1,38:41:255,102,0	1/1:0,23:25:255,73,0
-chr21	24341060	chr21:24341060:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:30:255,83,0	1/1:0,44:48:255,135,0	1/1:0,28:32:255,89,0
-chr21	24342272	chr21:24342272:M	ATCTATCTATCTATCTATGTATCTATCTATCAACTGTCTATCATCTGTCTATTTATCATCTATCTATCT	<18.2>	.	.	Motif=ATCT	GT:AD:DP:PL	1/1:0,9:10:141,26,0	1/1:0,8:9:121,23,0	1/1:0,19:21:255,55,0
-chr21	24349210	chr21:24349210:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:52,0,80	0/1:2,8:10:104,0,4	0/1:3,3:8:29,0,47
-chr21	24350862	chr21:24350862:M	AAAGAAAGAAA	<1.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,59:59:255,174,0	1/1:0,49:49:255,145,0
-chr21	24357842	chr21:24357842:M	TATATATATATATATGTATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:26,20:46:250,0,255	1/1:0,36:36:255,106,0	0/0:47,2:49:0,107,255
-chr21	24361597	chr21:24361597:M	TTTTTGTTTGTTTTTTTTTTGTTGTTTTTTGTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:30,1:31:0,73,255	0/1:17,12:29:132,0,223
-chr21	24367103	chr21:24367103:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,5:5:131,15,0
-chr21	24373121	chr21:24373121:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:29:89,0,248	1/1:4,28:35:255,35,0	0/1:17,16:36:178,0,201
-chr21	24374789	chr21:24374789:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,100,0	1/1:2,44:47:255,103,0	1/1:2,49:51:255,114,0
-chr21	24379399	chr21:24379399:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:7:83,0,43	0/1:1,6:8:140,0,4	0/1:5,6:12:120,0,101
-chr21	24379660	chr21:24379660:M	TTATTATTATTATTATTATTATT	<8.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:17,21:38:255,0,216	1/1:0,21:21:255,62,0	0/1:12,19:31:255,0,134
-chr21	24382599	chr21:24382599:M	AAAAATAAAAAAAAAAAAAAA	<18>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,11,4,8:25:255,141,168,245,75,201,255,0,135,255	1/2:0,19,11,0:32:255,175,88,255,0,215,255,145,255,255	2/3:1,0,19,13:36:255,255,255,160,218,127,255,254,0,214
-chr21	24383530	chr21:24383530:M	ATATATATATATATATATATATA	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:13,0:19:0,42,255	1/1:0,0:2:0,0,0	0/1:10,6:16:118,0,229
-chr21	24383556	chr21:24383556:M	AGAGAGAGAGAGA	<8.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:17,0:17:0,51,255	.	0/1:12,4:16:50,0,255
-chr21	24383571	chr21:24383571:M	ATATATATATACAGATATATATATATATATATACAGATATATATATACAGATATATATATATATATATA	<35.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:4:47,11,0	.	0/1:3,1:4:1,0,24
-chr21	24387454	chr21:24387454:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,12,0,5:18:255,157,123,255,142,255,208,0,255,255	2/3:1,0,10,4:17:255,255,255,99,114,74,154,255,0,255	1/1:0,30,0,0:31:255,91,0,255,93,255,255,93,255,255
-chr21	24391572	chr21:24391572:M	ATATATATAGTTATTTATAACATATAATATATATTTATAATATATATTATAT	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,3:13:43,0,222	0/1:2,3:5:67,0,37	0/1:5,5:10:107,0,100
-chr21	24402019	chr21:24402019:M	AAAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,7:23:58,0,211	1/1:1,11:15:179,16,0	0/0:21,1:22:0,47,255
-chr21	24412839	chr21:24412839:M	ATATGTATATATATGTATATATATATATATATACATATATATAT	<24>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,10:16:255,0,124	0/1:0,0:1:0,0,0	0/0:8,0:10:0,24,232
-chr21	24434397	chr21:24434397:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,2:13:19,0,255	0/0:19,0:25:0,74,255	0/1:10,5:19:92,0,246
-chr21	24480365	chr21:24480365:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:23:0,48,255	0/0:34,3:40:0,64,255	0/1:13,13:27:155,0,167
-chr21	24483526	chr21:24483526:M	AAAATAAAATAAAATAAAATAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<13>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:8,10:18:142,0,103	0/1:1,1:2:12,0,12	1/1:0,5:7:115,20,0
-chr21	24492847	chr21:24492847:M	TCTCTCTCTCTCTCTCTCTCCCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:29,0:30:0,87,255	0/0:46,1:47:0,116,255	0/1:16,20:36:255,0,255
-chr21	24492880	chr21:24492880:M	TGTTTTTTTTGTTGTTTTGATTTGTTTTGTTTTGTTTT	<7.8>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:35,0:35:0,104,255	0/1:13,7:20:93,0,228
-chr21	24501023	chr21:24501023:M	ACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	<9.2>,<10.2>	.	.	Motif=ACAAA	GT:AD:DP:PL	0/2:8,0,11:19:255,211,255,0,153,179	0/1:10,12,0:23:152,0,127,185,189,255	2/2:0,0,20:20:255,255,255,60,59,0
-chr21	24505690	chr21:24505690:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:25:0,58,255	0/0:20,0:25:0,46,255	0/1:16,19:40:255,0,255
-chr21	24508486	chr21:24508486:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:25:0,70,255	0/0:32,0:36:0,101,255	0/1:16,7:27:54,0,227
-chr21	24518180	chr21:24518180:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:97,12,0	1/1:0,5:8:181,23,0	1/1:0,7:7:203,21,0
-chr21	24519399	chr21:24519399:M	TCTCTCTCTCCCTTTCTCTGTCTCTCTCTCTCTCTCTC	<18>,<20>	.	.	Motif=TC	GT:AD:DP:PL	0/2:17,0,12:30:70,141,255,0,161,138	0/2:16,1,8:25:30,86,255,0,144,140	1/2:0,8,21:29:255,255,255,93,0,100
-chr21	24519436	chr21:24519436:M	CACACACACACACACAAACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/1:22,24:47:255,0,255	0/1:18,14:33:255,0,255	1/1:0,31:34:255,101,0
-chr21	24521573	chr21:24521573:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAA	<33>,<35>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:12:88,100,201,0,120,165	0/2:12,1,7:23:144,159,255,0,197,255	1/2:1,11,2:15:198,41,22,171,0,255
-chr21	24526323	chr21:24526323:M	TTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,3:5:124,62,50,18,0,4	1/2:0,2,0:3:71,10,3,34,0,26	1/2:0,5,2:7:206,35,15,87,0,67
-chr21	24527024	chr21:24527024:M	TTTTCTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7,0:15:82,0,100,106,142,255	0/2:6,0,9:17:207,158,227,0,108,130	1/1:1,12,0:13:193,21,0,196,38,221
-chr21	24530150	chr21:24530150:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,14:23:186,0,96	0/1:16,8:28:68,0,225	0/0:34,0:38:0,110,255
-chr21	24533391	chr21:24533391:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,9:22:255,218,195,194,0,255	1/2:1,9,8:18:255,191,174,134,0,216	0/1:20,12,0:33:114,0,255,208,255,255
-chr21	24543216	chr21:24543216:M	TGTGTGTGTGTGTGTGTGTGTG	<12>,<16>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,15,17:34:255,255,255,255,0,255	1/2:0,14,10:26:255,255,239,245,0,255	0/1:24,12,0:37:112,0,255,219,255,255
-chr21	24545569	chr21:24545569:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,27,12:39:255,217,224,255,0,255	1/2:2,13,17:33:255,255,255,204,0,255	0/1:26,25,0:53:255,0,255,255,255,255
-chr21	24551703	chr21:24551703:M	TTTTCTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:13:0,30,171	1/1:0,6:11:127,24,0	0/1:9,3:13:14,0,130
-chr21	24563122	chr21:24563122:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:30:255,70,0	1/1:1,45:46:255,117,0	1/1:1,42:44:255,111,0
-chr21	24566744	chr21:24566744:M	TATATATATATATATATATATATATATA	<16>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:12:227,33,0	0/1:1,1:3:15,0,15	0/1:1,3:7:51,0,9
-chr21	24572962	chr21:24572962:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:40:218,0,255	0/1:24,16:42:159,0,255	0/0:41,0:44:0,128,255
-chr21	24580128	chr21:24580128:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:6:119,51,66,76,0,67	0/1:3,7,0:11:166,0,66,178,58,228	2/2:0,0,2:2:34,40,59,6,6,0
-chr21	24584325	chr21:24584325:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:17:7,0,179	0/1:4,7:13:91,0,40	0/0:22,0:24:0,69,255
-chr21	24586155	chr21:24586155:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTT	<29>,<30>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,7:15:255,134,94,106,0,83	2/2:0,0,6:8:199,143,125,24,23,0	1/2:1,4,4:9:145,53,45,42,0,55
-chr21	24586339	chr21:24586339:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,5:9:74,0,28	1/1:2,13:18:221,17,0	0/0:10,0:10:0,29,177
-chr21	24592409	chr21:24592409:M	TTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:5:72,9,0	1/1:0,3:4:104,12,0	.
-chr21	24593600	chr21:24593600:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,6:6:165,18,0	0/1:8,9:17:198,0,175
-chr21	24599889	chr21:24599889:M	TTTTATTTTTAT	<2.3>	.	.	Motif=TTTTAT	GT:AD:DP:PL	1/1:0,46:46:255,138,0	1/1:0,39:39:255,117,0	0/1:15,20:35:255,0,255
-chr21	24601238	chr21:24601238:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,1:16:0,29,249	0/0:19,1:23:0,49,255	0/1:14,9:25:97,0,174
-chr21	24616356	chr21:24616356:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0:30:255,90,0,255,90,255	1/1:0,47,0:49:255,147,0,255,147,255	1/2:0,26,13:39:255,255,255,255,0,255
-chr21	24617888	chr21:24617888:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,5:47:0,46,255	0/0:40,2:42:0,88,255	0/1:36,31:69:255,0,255
-chr21	24618983	chr21:24618983:M	TTTTTGTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:89,15,0	1/1:1,8:10:117,9,0	0/1:6,6:16:62,0,87
-chr21	24621663	chr21:24621663:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,22:27:255,24,0	1/1:2,21:23:255,33,0	0/1:17,8:28:61,0,250
-chr21	24622313	chr21:24622313:M	AAAAAAAAAAAGAAAAAAAGAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:0,29:30:255,88,0	0/1:13,11:24:130,0,167
-chr21	24624600	chr21:24624600:M	AACAAACAAACAAACAAACAAACAAACAAA	<8.5>	.	.	Motif=AACA	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,30:30:255,88,0	0/1:14,13:27:169,0,184
-chr21	24627642	chr21:24627642:M	ATAAATACATAAGTAAATAAATAA	<6.2>	.	.	Motif=ATAA	GT:AD:DP:PL	1/1:6,26:32:227,18,0	1/1:5,24:30:210,17,0	0/1:26,13:39:42,0,191
-chr21	24627670	chr21:24627670:M	GTGTGTGTGTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,34:34:255,102,0	0/1:21,23:45:255,0,255
-chr21	24630988	chr21:24630988:M	TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,38:39:255,114,0	0/1:11,21:32:255,0,110
-chr21	24633370	chr21:24633370:M	TGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,9:21:255,104,47,109,0,82	1/2:1,7,5:13:143,45,22,51,0,55	0/2:11,1,3:15:25,22,107,0,113,201
-chr21	24634911	chr21:24634911:M	TAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	<10.2>,<11.2>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/2:4,0,5:10:69,69,165,0,62,50	0/2:3,0,3:7:37,33,104,0,41,36	1/2:0,7,4:11:243,63,42,129,0,99
-chr21	24636570	chr21:24636570:M	TATATATATATATATATATATATATAT	<7.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,23:24:255,255,255,72,72,0	2/2:0,0,4:4:116,116,116,12,12,0	1/2:0,8,5:15:255,133,116,200,0,188
-chr21	24636638	chr21:24636638:M	TATATATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,34:35:255,98,0	1/1:0,12:13:169,36,0	0/1:17,8:28:67,0,146
-chr21	24636656	chr21:24636656:M	TTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,5,27:34:255,255,249,99,11,0	2/2:0,0,9:11:255,119,87,31,8,0	1/1:0,20,4:30:255,86,0,255,33,255
-chr21	24641986	chr21:24641986:M	TTTGTTTCTGTTTTTGTTTTTTTTTT	<4.5>	.	.	Motif=TTTGTT	GT:AD:DP:PL	0/0:35,2:38:0,76,255	0/1:7,13:21:171,0,60	0/0:22,0:22:0,64,255
-chr21	24644109	chr21:24644109:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,3:4:39,0,5	1/1:0,1:2:28,6,0
-chr21	24645907	chr21:24645907:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:17:255,51,0	1/1:0,11:15:255,36,0	1/1:1,15:17:255,21,0
-chr21	24656275	chr21:24656275:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:15:202,7,0	0/1:2,7:13:124,0,15	1/1:2,11:14:174,5,0
-chr21	24660566	chr21:24660566:M	TTAATTAAATTAATTGATTAATTA	<5>	.	.	Motif=TTAA	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,37:38:255,112,0	1/1:0,37:37:255,109,0
-chr21	24663567	chr21:24663567:M	TTTTCTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:12:255,35,0	1/1:0,9:12:255,31,0	1/1:0,3:3:89,9,0
-chr21	24667453	chr21:24667453:M	ATATATATATATATATAAAATATATATAT	<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,23:23:255,69,0	1/1:0,8:8:210,24,0	1/1:0,17:17:255,51,0
-chr21	24667499	chr21:24667499:M	ATATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,14:14:255,42,0	1/1:0,19:21:255,60,0
-chr21	24669541	chr21:24669541:M	CTCTCTCTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:1,40:41:255,103,0	1/1:0,34:36:255,105,0
-chr21	24680590	chr21:24680590:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:32:255,56,0	1/1:1,43:45:255,114,0	1/1:0,34:34:255,100,0
-chr21	24681669	chr21:24681669:M	CACACACACACAC	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,41:42:255,105,0	1/1:1,29:30:255,70,0	1/1:0,29:29:255,86,0
-chr21	24682960	chr21:24682960:M	ACACACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39:41:255,122,0	1/1:0,36:36:255,108,0	1/1:0,48:48:255,144,0
-chr21	24686391	chr21:24686391:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:47:255,138,0	1/1:2,52:56:255,128,0	1/1:0,42:43:255,126,0
-chr21	24688236	chr21:24688236:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,44:47:255,101,0	0/1:20,21:42:255,0,231	0/1:15,28:44:255,0,145
-chr21	24690435	chr21:24690435:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAA	<39>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4,0:5:52,0,2,55,16,79	0/1:4,6,0:11:64,0,43,78,72,182	0/2:2,1,3:6:63,34,50,0,18,39
-chr21	24696204	chr21:24696204:M	TGTGTGTATGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,18:30:255,0,138	0/0:20,0:22:0,62,255	1/1:0,19:23:255,68,0
-chr21	24696241	chr21:24696241:M	ACACACACACACACACACATACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,10:24:175,0,250	0/0:22,0:22:0,66,255	1/1:0,17:17:255,51,0
-chr21	24698516	chr21:24698516:M	AAAAAAATAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,255	0/0:43,0:43:0,129,255	1/1:0,52:55:255,164,0
-chr21	24701845	chr21:24701845:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,1:36:0,88,255	0/1:14,21:36:255,0,143	0/0:46,1:47:0,120,255
-chr21	24715815	chr21:24715815:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:12:119,0,45	0/0:0,0:1:0,3,19	1/1:0,6:10:206,23,0
-chr21	24715854	chr21:24715854:M	AGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,9:28:139,0,255	0/0:26,0:26:0,78,255	1/1:0,15:17:255,37,0
-chr21	24718412	chr21:24718412:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,11:27:180,0,255	0/1:16,16:36:255,0,255	1/1:2,26:34:255,37,0
-chr21	24727598	chr21:24727598:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,22:42:255,0,244	0/0:30,0:32:0,93,255	0/1:23,19:44:212,0,255
-chr21	24729171	chr21:24729171:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0,0:37:0,109,255,111,255,255	0/2:16,2,18:38:255,255,255,0,255,255	0/1:26,24,1:51:255,0,255,255,255,255
-chr21	24736981	chr21:24736981:M	GTGGGGTGGGG	<2.4>	.	.	Motif=GTGGG	GT:AD:DP:PL	0/1:3,14:17:255,0,18	0/0:16,0:16:0,48,255	0/1:11,15:26:255,0,174
-chr21	24738324	chr21:24738324:M	AAAAAAAAATAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,14:37:150,0,255	0/1:14,12:26:133,0,168	1/1:0,21:22:255,64,0
-chr21	24741148	chr21:24741148:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>,<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,10,5,0,0:28:255,0,255,63,237,255,255,162,221,255,255,255,255,255,255	0/4:11,0,0,1,5:18:83,130,255,130,255,255,57,195,192,143,0,253,229,120,208	2/3:4,9,12,20,1:46:255,241,255,207,255,255,255,37,0,255,255,255,255,255,255
-chr21	24741192	chr21:24741192:M	ATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:20,23:46:255,0,255	0/0:24,0:24:0,72,255	0/1:27,24:52:255,0,255
-chr21	24741202	chr21:24741202:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/1:10,12:22:249,0,177	0/1:31,21:52:255,0,255
-chr21	24748702	chr21:24748702:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,7:23:124,0,255	0/0:28,0:29:0,87,255	0/1:20,15:38:255,0,255
-chr21	24765824	chr21:24765824:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,13:28:255,243,168,219,0,178	0/1:14,12,0:28:129,0,185,177,255,255	0/2:13,0,8:21:165,141,255,0,230,255
-chr21	24767358	chr21:24767358:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:251,0,255	0/1:17,22:39:255,0,255	0/0:32,0:33:0,99,255
-chr21	24767403	chr21:24767403:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:197,15,0	0/1:0,1:2:39,0,7	1/1:0,1:1:32,3,0
-chr21	24774242	chr21:24774242:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,22:50:255,0,255	0/0:43,0:46:0,134,255	0/1:20,27:50:255,0,223
-chr21	24781970	chr21:24781970:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:31:96,0,180	0/1:15,14:31:135,0,128	0/0:30,1:32:0,75,255
-chr21	24784350	chr21:24784350:M	ATATATATATATATATATAT	<9>,<11>	.	.	Motif=AT	GT:AD:DP:PL	1/2:2,14,16:34:255,255,255,245,0,255	0/1:16,17,0:36:218,0,187,255,242,255	0/2:16,0,14:31:181,255,255,0,251,207
-chr21	24791984	chr21:24791984:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTG	<22.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,5,0:13:52,0,100,76,134,255	0/1:13,9,0:22:90,0,159,129,220,255	0/2:14,2,11:29:240,161,255,0,230,255
-chr21	24797961	chr21:24797961:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:14:73,0,162	0/1:11,8:24:161,0,255	0/0:24,0:24:0,72,255
-chr21	24799402	chr21:24799402:M	AAAAAAAAAAAAAAAAAAA	<17>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18,0:22:255,62,0,255,65,255	1/2:0,4,6:11:187,107,157,99,0,82	1/2:2,24,8:39:255,106,166,255,0,255
-chr21	24802225	chr21:24802225:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGT	<16>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,29:29:255,87,0	0/1:14,16:30:255,0,255	0/1:20,17:41:255,0,255
-chr21	24806111	chr21:24806111:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:0,33:33:255,97,0	0/0:19,0:20:0,59,255
-chr21	24807935	chr21:24807935:M	ATATTATATATATATATATGTAAATATATATATA	<18>,<19>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,12,18:31:255,255,253,175,0,147	0/2:6,1,7:14:159,108,177,0,90,132	0/1:10,13,0:23:174,0,118,204,183,255
-chr21	24811882	chr21:24811882:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:22:94,0,146	0/1:12,10:24:104,0,147	0/0:20,0:20:0,59,255
-chr21	24828390	chr21:24828390:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,8:20:168,0,224	0/1:7,6:15:136,0,153	1/1:1,15:22:255,21,0
-chr21	24832630	chr21:24832630:M	ACACACACACACACACAC	<10>	.	.	Motif=AC	GT:AD:DP:PL	0/1:27,18:46:202,0,255	0/0:42,0:44:0,129,255	0/1:29,22:52:255,0,255
-chr21	24835684	chr21:24835684:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,9:28:187,0,255	0/0:20,0:27:0,63,255	0/1:17,8:28:146,0,255
-chr21	24836423	chr21:24836423:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,29:47:255,0,202	0/1:14,14:29:165,0,174	0/1:13,24:37:255,0,131
-chr21	24838266	chr21:24838266:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,22:24:255,255,255,65,58,0	1/2:0,12,12:27:255,211,255,255,0,255	0/2:11,0,10:26:134,201,255,0,210,142
-chr21	24841845	chr21:24841845:M	TTTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:29:0,82,255	0/1:24,9:33:59,0,255	0/0:29,0:29:0,85,255
-chr21	24847015	chr21:24847015:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:30:211,0,155	0/1:24,17:43:186,0,255	1/1:0,27:29:255,85,0
-chr21	24855453	chr21:24855453:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2:39:0,78,255	0/1:20,14:36:145,0,255	0/1:11,21:32:255,0,106
-chr21	24859691	chr21:24859691:M	ATATATATATATATATATA	<7.5>,<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:19,17,1:37:255,0,255,255,255,255	0/2:9,0,19:28:255,255,255,0,159,79	1/2:0,18,19:37:255,255,247,255,0,228
-chr21	24870562	chr21:24870562:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,14:34:155,0,255	0/1:12,13:28:144,0,156	1/1:1,28:35:255,80,0
-chr21	24878687	chr21:24878687:M	TTTGTTTTGTTTGTGGTGTTTTTCTTTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	<10>	.	.	Motif=TTTGT	GT:AD:DP:PL	1/1:0,2:3:61,9,0	1/1:0,6:8:169,24,0	1/1:0,3:3:68,9,0
-chr21	24879776	chr21:24879776:M	TATTTTTTTATGTGTATTTATTTATATTTATTT	<7>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:18,8:26:125,0,255	0/0:8,0:8:0,24,214	0/1:10,9:19:173,0,210
-chr21	24879820	chr21:24879820:M	TATATATATTTTTATATATGTTTATATATATTTTATATATTTATATATACGTATATATATATACGTATATATATATATATATATATACACATATATATA	<27.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,1:1:23,3,0	.	1/1:0,3:3:69,9,0
-chr21	24889901	chr21:24889901:M	ATATATATATATATGTGTGTGTATATATATATATATATAT	<18>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,14:29:255,0,255	0/1:5,13:18:255,0,80	1/1:0,34:34:255,102,0
-chr21	24899193	chr21:24899193:M	GAGAGAGAGAGAGAGAGAGAGACGGAAAGAGAGAGAGAGAGACAGACAGAGAGACAGACAGACAGAGAGACAGACAGAGAGA	<5.5>	.	.	Motif=GAGA	GT:AD:DP:PL	0/1:2,4:10:92,0,38	0/1:3,1:9:15,0,71	0/0:4,0:11:0,15,122
-chr21	24905907	chr21:24905907:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3,2:12:20,0,114,18,71,144	0/2:6,1,2:11:17,19,116,0,62,85	2/2:1,0,6:7:89,108,173,3,18,0
-chr21	24917569	chr21:24917569:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:30:0,69,255	0/1:18,17:35:204,0,221	0/1:25,25:50:255,0,255
-chr21	24922191	chr21:24922191:M	ATATATATGGTATATATCATATATATAT	<15>	.	.	Motif=AT	GT:AD:DP:PL	0/1:14,3:17:8,0,220	0/0:15,0:15:0,44,255	0/1:17,6:23:45,0,251
-chr21	24922373	chr21:24922373:M	TTTTTTTTCTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,2,10:24:255,255,255,0,159,255	0/1:5,7,0:14:82,0,59,119,94,255	1/2:0,11,2:17:250,94,73,183,0,255
-chr21	24928678	chr21:24928678:M	TTTTTTTTATTTTTTTTATTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:0,28:28:255,82,0	1/1:1,33:34:255,82,0
-chr21	24934629	chr21:24934629:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:30:119,0,235	1/1:1,17:21:255,34,0	0/1:10,14:24:175,0,105
-chr21	24937333	chr21:24937333:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:36,0,19	1/1:1,7:8:97,7,0	1/1:0,5:5:83,15,0
-chr21	24940527	chr21:24940527:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:2:52,6,0	.	1/1:0,3:3:91,9,0
-chr21	24941147	chr21:24941147:M	TAAAAATAAAAA	<2.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/1:21,30:52:255,0,158	0/1:29,17:47:122,0,255	0/0:41,0:42:0,112,255
-chr21	24943428	chr21:24943428:M	TTTTTTTTTTTTCTTTTTTTTTTTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3,0:6:47,0,18,61,30,114	0/2:2,0,3:5:36,50,106,0,28,19	1/2:0,6,3:10:139,61,68,103,0,144
-chr21	24946296	chr21:24946296:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:79,14,0	0/1:1,3:5:51,0,2	1/1:0,3:3:51,9,0
-chr21	24952227	chr21:24952227:M	TTCTTGTTCTTGTTTTGTT	<3.7>	.	.	Motif=TTCTTG	GT:AD:DP:PL	0/1:22,16:38:255,0,255	0/0:44,0:45:0,133,255	0/1:27,14:41:253,0,255
-chr21	24955214	chr21:24955214:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,10:18:132,0,61	0/1:10,4:16:23,0,134	0/1:6,12:19:154,0,50
-chr21	24957091	chr21:24957091:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,17:22:255,50,0	1/1:0,4:6:82,14,0	1/1:0,6:7:108,18,0
-chr21	24958748	chr21:24958748:M	AAAAAAGAAAAAAAAAAAAAAAAACAAAGAAAAGAAAA	<37>,<39>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,8:15:165,122,189,64,0,90	2/2:1,0,9:13:166,195,255,21,35,0	1/2:0,4,5:10:136,83,111,76,0,97
-chr21	24969519	chr21:24969519:M	ACACACACGCAGACACACACACACACATCTAAACACACACACACACACAC	<26>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,9:18:117,0,116	1/1:0,24:24:255,71,0	0/1:11,10:22:119,0,146
-chr21	24974689	chr21:24974689:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,5:28:9,0,255	1/1:0,16:17:255,49,0	0/1:11,6:19:68,0,135
-chr21	24981549	chr21:24981549:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,10:27:255,162,106,201,0,194	1/2:0,18,8:27:255,141,66,248,0,221	1/2:2,13,18:35:255,255,211,142,0,149
-chr21	24987372	chr21:24987372:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:27:238,0,255	0/0:19,0:23:0,62,255	0/1:11,5:19:87,0,251
-chr21	24990644	chr21:24990644:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:20:255,40,0	0/1:18,10:30:97,0,221	0/1:11,14:30:185,0,119
-chr21	24991240	chr21:24991240:M	AAAAAAAAAAAACGAAAAAAGAAAAGAGAAAGAAAAAAAAAGAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:136,0,154	1/1:0,28:29:255,85,0	0/0:16,1:17:0,32,255
-chr21	24997456	chr21:24997456:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,20:24:255,54,0	1/1:0,8:10:91,15,0	1/1:0,21:26:255,59,0
-chr21	25004368	chr21:25004368:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/1:13,18:31:245,0,151	1/1:0,24:24:255,70,0	0/0:30,0:30:0,88,255
-chr21	25010479	chr21:25010479:M	ACACACACACATACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:37,0:38:0,111,255	0/1:20,18:40:255,0,255	0/0:51,0:51:0,153,255
-chr21	25010667	chr21:25010667:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,5:46:0,43,255	0/0:32,2:36:0,67,255	0/1:25,21:49:255,0,255
-chr21	25018811	chr21:25018811:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,50:52:255,134,0	1/1:4,58:63:255,114,0	0/1:20,20:41:244,0,254
-chr21	25021697	chr21:25021697:M	GTTTGTTTGTTTGTTTGTTT	<6>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:33,0:33:0,97,255	0/1:24,24:48:255,0,255
-chr21	25022199	chr21:25022199:M	GGGGGGGGGGGGG	<10>,<12>	.	.	Motif=G	GT:AD:DP:PL	2/2:0,0,3:5:75,67,89,14,9,0	2/2:0,0,3:5:76,65,87,14,9,0	1/2:0,4,4:9:179,72,92,109,0,93
-chr21	25023583	chr21:25023583:M	ATTTATTTATTTATT	<4.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:47,0:47:0,139,255	0/0:53,0:53:0,156,255	0/1:23,23:46:255,0,255
-chr21	25027856	chr21:25027856:M	ACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:18,20:38:247,0,206	0/0:57,0:57:0,168,255
-chr21	25029138	chr21:25029138:M	TATATATATATATATATATATATATATATATATATATAT	<15.5>,<16.5>,<20.5>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,14,4:18:255,255,255,66,110,69,255,231,0,255	2/2:0,0,1,0:1:31,19,16,3,3,0,31,19,3,31	1/3:0,6,0,3:9:207,49,64,146,82,163,167,0,97,158
-chr21	25030087	chr21:25030087:M	TTCCTTCCTTCCTTCTTTCCTTTCTTCCTTCCTCCCTCCCTCCCTCCTTCTTCCTTCCTTCCTTGCTTCCTTCCTTTTTTCCTTCCTTC	<2.8>,<18.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:2,3,6:12:169,103,145,22,0,51	0/2:2,1,2:7:77,59,106,0,26,38	0/2:3,1,5:11:141,126,199,0,51,54
-chr21	25040379	chr21:25040379:M	AAAAAAAAAATAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/0:43,0:44:0,129,255	0/1:16,20:36:255,0,190
-chr21	25040543	chr21:25040543:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,23,0:28:255,0,8,255,89,255	1/1:2,25,0:27:255,45,0,255,79,255	1/2:0,20,10:30:255,174,89,255,0,255
-chr21	25052192	chr21:25052192:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:22,0,16	0/1:1,4:5:50,0,2	0/1:3,4:10:50,0,35
-chr21	25061130	chr21:25061130:M	TTATTTTTTATTTATTTATTTATTTATTTATTTATTTATTT	<13.2>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,8:8:223,24,0	1/1:0,2:2:56,6,0	0/1:9,6:15:122,0,205
-chr21	25061461	chr21:25061461:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,22:25:255,38,0	1/1:0,20:24:255,68,0	0/1:8,16:25:212,0,64
-chr21	25063956	chr21:25063956:M	CACACACACACACACACACACACACACACACACACA	<15>,<16>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,19,23:42:255,255,255,255,0,225	1/1:0,26,1:29:255,86,0,255,67,255	0/2:6,0,21:28:255,255,255,0,148,92
-chr21	25070637	chr21:25070637:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,24:27:255,43,0	1/1:2,21:26:255,38,0	0/1:14,15:30:186,0,159
-chr21	25096779	chr21:25096779:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,13:23:182,0,74	0/1:3,6:12:90,0,18	0/1:4,12:19:172,0,25
-chr21	25096945	chr21:25096945:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:31:0,69,255	0/1:15,11:27:110,0,189	0/0:30,1:31:0,74,255
-chr21	25102864	chr21:25102864:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:29:255,84,0	1/1:0,29:31:255,87,0	0/1:21,22:43:255,0,255
-chr21	25130137	chr21:25130137:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,31:33:255,61,0	1/1:1,31:34:255,82,0	0/1:15,20:36:253,0,171
-chr21	25138954	chr21:25138954:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,12:18:173,0,17	1/1:1,10:11:147,16,0	0/0:9,0:10:0,29,164
-chr21	25144016	chr21:25144016:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:13:94,0,42	0/1:1,4:5:53,0,2	0/0:7,0:7:0,21,121
-chr21	25145300	chr21:25145300:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:21:131,0,255	1/1:0,8:11:231,21,0	0/0:24,0:26:0,78,255
-chr21	25152194	chr21:25152194:M	TATATAAATATATATAAATTATATATAAATTTATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,4:30:34,0,255	0/1:4,3:7:68,0,83	0/1:17,5:26:85,0,255
-chr21	25158458	chr21:25158458:M	GAAGGAAGGAAGG	<2.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:11,15:26:220,0,136	0/0:22,0:22:0,65,255	0/1:18,17:35:222,0,236
-chr21	25162327	chr21:25162327:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,44:44:255,129,0	0/1:24,25:49:255,0,255
-chr21	25170469	chr21:25170469:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,9:19:104,0,122	0/1:10,6:17:60,0,120	0/0:18,1:22:0,46,255
-chr21	25174547	chr21:25174547:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,4:10:99,41,59,26,0,24	1/2:1,8,3:14:255,26,22,137,0,118	2/2:0,0,4:6:67,68,69,10,12,0
-chr21	25179952	chr21:25179952:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,19:38:243,0,233	1/1:0,40:41:255,120,0	0/0:41,3:45:0,77,255
-chr21	25180903	chr21:25180903:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,23:49:255,0,255	1/1:4,44:51:255,78,0	0/0:49,2:52:0,116,255
-chr21	25181034	chr21:25181034:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,19:48:222,0,255	0/0:43,2:45:0,96,255	0/1:30,23:54:255,0,255
-chr21	25181846	chr21:25181846:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<7.5>,<8>,<12.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/2:0,11,8,0:19:255,220,185,255,0,255,255,220,255,255	2/2:0,0,18,0:18:255,255,255,54,54,0,255,255,54,255	1/3:0,12,0,4:16:255,75,77,255,113,255,255,0,255,255
-chr21	25183010	chr21:25183010:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>,<21>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,15,11,0:29:255,255,255,255,0,255,255,255,255,255	2/3:0,0,10,7:18:255,255,255,191,191,153,255,255,0,241	0/1:20,14,0,0:36:255,0,255,255,255,255,255,255,255,255
-chr21	25186124	chr21:25186124:M	AAAAAAAAGAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/0:42,0:43:0,124,255	0/1:21,27:48:255,0,248
-chr21	25186446	chr21:25186446:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:117,0,63	0/0:9,0:11:0,32,174	0/1:3,4:9:54,0,37
-chr21	25187519	chr21:25187519:M	TGTTTTTTTTTTTGTTTGTTT	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:53,0:55:0,157,255	0/0:31,0:31:0,93,255	0/1:22,15:37:225,0,255
-chr21	25190702	chr21:25190702:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:91,12,0	1/1:0,0:1:14,3,0	0/1:6,4:10:79,0,140
-chr21	25194404	chr21:25194404:M	ACACATACAGACACACACACACACACACACACACACACACACA	<17.5>,<25.5>,<27.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,16,0,5:21:255,133,85,255,131,255,255,0,255,255	2/3:0,0,12,12:26:255,255,255,255,255,255,255,255,0,255	0/1:11,17,0,0:29:255,0,255,255,255,255,255,255,255,255
-chr21	25195902	chr21:25195902:M	TTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTT	<33>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,7,6:15:209,69,63,69,0,101	0/1:8,6,0:15:57,0,103,84,143,255	0/2:5,1,4:11:81,53,119,0,77,120
-chr21	25196771	chr21:25196771:M	TATATATATAGGATATATATA	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,20:34:255,0,151	1/1:0,15:16:255,46,0	0/0:52,0:52:0,154,255
-chr21	25198324	chr21:25198324:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,22:40:255,0,220	1/1:1,27:29:255,67,0	0/0:32,0:32:0,94,255
-chr21	25203356	chr21:25203356:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,22:27:255,24,0	1/1:4,20:25:255,4,0	0/1:10,7:17:76,0,129
-chr21	25210329	chr21:25210329:M	TTTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTT	<33>,<35>,<36>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,4,9,0:23:56,65,232,0,42,104,95,182,162,255	0/3:11,0,1,6:19:96,141,255,62,173,152,0,139,125,216	1/2:1,10,15,0:28:234,177,255,113,0,174,255,192,240,255
-chr21	25214217	chr21:25214217:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:25,0,8	1/1:0,7:8:113,20,0	0/1:6,5:12:59,0,65
-chr21	25223513	chr21:25223513:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,1:4:6,15,94,0,52,40	2/2:0,0,8:10:137,113,108,25,4,0	1/2:2,3,3:9:83,9,56,17,0,28
-chr21	25228145	chr21:25228145:M	ATATATATATATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,5:21:160,0,86	1/1:0,3:5:104,12,0	0/0:5,0:8:0,23,183
-chr21	25228176	chr21:25228176:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:8,2,5:17:106,34,191,0,169,202	1/2:0,1,1:2:43,12,6,11,0,6	0/1:2,7,0:9:125,0,16,77,38,104
-chr21	25232074	chr21:25232074:M	AAAAAAGAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,126,0	1/1:0,37:37:255,111,0	1/1:0,48:50:255,144,0
-chr21	25237376	chr21:25237376:M	AATAGTAATAGT	<2.7>	.	.	Motif=AATAGT	GT:AD:DP:PL	0/1:10,18:28:255,0,195	1/1:0,34:34:255,102,0	0/0:32,0:32:0,96,255
-chr21	25242694	chr21:25242694:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:0,33:35:255,102,0	0/1:21,6:30:41,0,255
-chr21	25244413	chr21:25244413:M	GTGTGTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,38:38:255,112,0	0/1:18,24:43:255,0,212
-chr21	25247870	chr21:25247870:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,1,13:30:148,215,255,0,224,211	0/0:24,2,1:27:0,45,255,61,255,255	1/2:0,13,8:22:255,148,187,226,0,255
-chr21	25259483	chr21:25259483:M	ATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATAGATAATAGATAGATA	<17.2>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:6,2:9:20,0,86	1/1:1,14:15:230,27,0	0/1:5,10:15:139,0,47
-chr21	25259585	chr21:25259585:M	ATGATGATGATGATGATGATGA	<6.3>	.	.	Motif=ATG	GT:AD:DP:PL	1/1:0,47:47:255,139,0	1/1:0,41:41:255,121,0	1/1:0,42:42:255,124,0
-chr21	25266888	chr21:25266888:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:20:255,41,0	1/1:3,17:21:242,11,0	1/1:0,19:20:255,58,0
-chr21	25269904	chr21:25269904:M	AAAAAGAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:27:55,0,255	0/1:8,7:18:77,0,104	0/1:4,11:19:150,0,37
-chr21	25280880	chr21:25280880:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGT	<17>,<19>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,18,17:37:255,255,255,255,0,255	1/2:0,24,5:30:255,88,57,255,0,255	0/2:12,0,16:28:203,255,255,0,212,132
-chr21	25303267	chr21:25303267:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,5:7:71,0,16	1/1:1,11:14:193,23,0	0/1:15,5:21:28,0,223
-chr21	25309386	chr21:25309386:M	ACAACAACAACAACAACAA	<7.7>	.	.	Motif=ACA	GT:AD:DP:PL	1/1:0,54:54:255,162,0	1/1:0,31:31:255,93,0	0/1:29,20:49:255,0,255
-chr21	25310083	chr21:25310083:M	ATATATATATATGTGTGTATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,5:5:61,14,0	1/1:0,2:2:24,5,0	1/1:0,6:6:73,17,0
-chr21	25317688	chr21:25317688:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,54:54:255,159,0	0/1:26,20:47:232,0,255
-chr21	25318545	chr21:25318545:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,58:58:255,174,0	1/1:0,47:48:255,144,0	0/1:22,27:51:255,0,255
-chr21	25328125	chr21:25328125:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:16:93,0,93	0/1:6,8:15:99,0,57	0/0:19,0:22:0,53,255
-chr21	25328639	chr21:25328639:M	ATATTAATATTAATTTATGTTAATTATTAATAT	<3>	.	.	Motif=ATATTA	GT:AD:DP:PL	0/1:30,12:42:192,0,255	0/1:30,6:38:52,0,255	0/1:41,7:49:43,0,255
-chr21	25330156	chr21:25330156:M	ATTATTATCATTATTATTAATTATTAT	<8>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,25:25:255,74,0	0/1:23,25:48:255,0,255
-chr21	25330181	chr21:25330181:M	ATGATAATGATA	<1.5>	.	.	Motif=ATGATA	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,38:38:255,114,0	0/1:30,30:60:255,0,255
-chr21	25332291	chr21:25332291:M	ATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:2,16,13:33:255,255,255,255,0,255	1/2:0,9,2:11:183,50,24,157,0,236	0/2:12,0,3:15:43,78,255,0,215,255
-chr21	25349188	chr21:25349188:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,2,0:22:4,0,255,61,255,255	0/1:3,5,0:10:100,0,76,115,64,181	0/2:16,0,8:28:123,195,255,0,255,230
-chr21	25351944	chr21:25351944:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,20:46:233,0,255	0/1:21,20:43:225,0,242	0/0:43,3:46:0,82,255
-chr21	25352085	chr21:25352085:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,23:39:255,0,172	0/1:19,18:39:210,0,229	0/0:38,0:39:0,112,255
-chr21	25368279	chr21:25368279:M	AAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:6:118,51,35,44,0,35	2/2:0,1,5:7:147,93,76,18,4,0	0/2:10,2,2:15:26,12,142,0,139,240
-chr21	25399853	chr21:25399853:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:13:83,0,67	0/1:9,3:14:10,0,129	0/1:4,6:11:79,0,37
-chr21	25420159	chr21:25420159:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,111,0	1/1:0,31:35:255,99,0	1/1:0,33:37:255,102,0
-chr21	25427328	chr21:25427328:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/1:28,17:45:172,0,255	0/0:55,2:57:0,131,255
-chr21	25431540	chr21:25431540:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,22:50:255,0,255	0/1:25,19:46:222,0,255	0/0:37,1:39:0,96,255
-chr21	25439922	chr21:25439922:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:33:161,0,244	0/1:18,13:33:150,0,218	0/0:37,1:41:0,101,255
-chr21	25449117	chr21:25449117:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,7:23:255,89,70,238,0,196	1/2:2,11,3:17:255,10,25,161,0,151	1/1:0,27,1:30:255,86,0,255,70,255
-chr21	25452012	chr21:25452012:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,21,7:31:255,124,129,255,0,255	1/2:0,11,12:23:255,203,255,255,0,255	2/2:1,0,29:31:255,255,255,73,92,0
-chr21	25453066	chr21:25453066:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,4:5:55,58,83,0,17,3	2/2:0,0,3:3:50,50,50,9,9,0	1/2:2,3,4:9:93,23,63,17,0,25
-chr21	25477440	chr21:25477440:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:161,0,179	0/0:37,1:39:0,97,255	0/1:16,20:37:255,0,180
-chr21	25496834	chr21:25496834:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,19:21:255,25,0	0/1:16,15:33:165,0,195	1/1:1,17:19:255,38,0
-chr21	25510247	chr21:25510247:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:19:199,0,9	0/1:5,3:9:24,0,69	1/1:2,8:14:131,2,0
-chr21	25511959	chr21:25511959:M	ATATATATATATATATATATA	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:22,2:26:0,36,255	0/0:12,0:13:0,38,250	0/1:12,7:19:85,0,185
-chr21	25514771	chr21:25514771:M	ATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGA	<11.2>,<13.2>	.	.	Motif=ATGG	GT:AD:DP:PL	1/2:1,11,9:21:255,152,202,190,0,255	1/1:0,33,0:33:255,97,0,255,99,255	2/2:0,0,22:22:255,255,255,65,66,0
-chr21	25524688	chr21:25524688:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,49:51:255,131,0	0/1:8,13:23:183,0,74	1/1:1,27:31:255,72,0
-chr21	25534823	chr21:25534823:M	ACACACACACACACACACACACACACACACACACA	<9.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,7:22:137,184,255,0,255,255	1/2:0,15,8:30:255,194,137,255,0,255	0/0:18,0,0:30:0,85,255,17,255,255
-chr21	25535422	chr21:25535422:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:26:0,41,255	0/1:11,5:20:36,0,137	0/0:25,3:28:0,31,255
-chr21	25540122	chr21:25540122:M	AATAATAATAATAATAATAA	<5.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:40,0:42:0,102,255	0/1:16,13:30:160,0,203	0/0:45,1:48:0,101,255
-chr21	25547348	chr21:25547348:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<24>,<27>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11,0:14:208,40,0,240,41,255	0/2:2,1,4:12:109,84,109,0,7,64	1/1:2,9,0:13:132,6,0,164,38,255
-chr21	25552832	chr21:25552832:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/0:33,4:38:0,41,255	0/1:17,15:35:189,0,214
-chr21	25559376	chr21:25559376:M	TTTTTTTTTTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:12:0,33,255	0/1:4,3:7:59,0,86	0/0:5,0:6:0,17,141
-chr21	25562048	chr21:25562048:M	GGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/1:7,3:12:19,0,92	0/0:20,0:21:0,58,255
-chr21	25566946	chr21:25566946:M	TCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:16,25:42:255,0,165	0/0:34,0:34:0,100,255
-chr21	25572109	chr21:25572109:M	ATATATATATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:14,2:19:0,17,57	0/1:6,8:17:7,0,15	0/0:19,0:20:0,35,95
-chr21	25572130	chr21:25572130:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12,0:29:255,0,235,139,255,255	1/2:0,4,5:13:255,73,37,76,0,47	0/0:21,0,0:24:0,50,255,66,255,255
-chr21	25573530	chr21:25573530:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	0/1:22,21:45:254,0,255	1/1:0,34:34:255,100,0
-chr21	25575777	chr21:25575777:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,67,0	0/1:11,13:25:164,0,118	1/1:1,32:35:255,82,0
-chr21	25576486	chr21:25576486:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<11>,<12>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,14,0:27:255,233,153,214,0,135,255,233,214,255	1/3:0,15,0,22:39:255,255,255,255,255,255,255,0,237,255	2/2:0,0,38,0:38:255,255,255,114,111,0,255,255,114,255
-chr21	25577031	chr21:25577031:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,53:55:255,143,0	1/1:0,55:56:255,164,0	1/1:0,36:38:255,111,0
-chr21	25577094	chr21:25577094:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,52:56:255,127,0	1/1:0,35:35:255,103,0	1/1:1,36:38:255,87,0
-chr21	25581342	chr21:25581342:M	CTTTCTTTCTTTCTTT	<1.5>,<1.8>	.	.	Motif=CTTT	GT:AD:DP:PL	2/2:0,0,3:7:165,46,26,21,0,0	1/2:0,0,0:5:83,25,12,19,0,5	1/1:0,3,0:5:124,14,0,41,4,26
-chr21	25581355	chr21:25581355:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:50,9,0	1/1:0,2:3:45,9,0	0/1:1,1:3:21,0,8
-chr21	25581993	chr21:25581993:M	TATATATATATATCTTATATATATACACTATTATATATATA	<21>,<22>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,3,4:12:72,44,37,2,0,33	1/1:0,2,0:3:6,3,0,10,4,22	1/2:1,1,4:6:46,39,34,0,0,9
-chr21	25582033	chr21:25582033:M	ACACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:18,0:21:0,62,255	0/1:5,3:11:38,0,97	0/0:13,0:16:0,47,255
-chr21	25584863	chr21:25584863:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,10:20:125,0,125	0/1:9,18:31:249,0,73	0/0:23,3:30:0,18,255
-chr21	25588312	chr21:25588312:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,91,0	0/1:21,17:39:188,0,255	1/1:0,47:48:255,141,0
-chr21	25589422	chr21:25589422:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:23:255,63,0	1/1:0,37:40:255,111,0	1/1:0,32:35:255,96,0
-chr21	25591080	chr21:25591080:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:39:255,116,0	1/1:0,13:14:255,42,0	1/1:0,40:41:255,123,0
-chr21	25594250	chr21:25594250:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,4:12:222,52,31,108,0,78	0/2:0,0,1:4:4,13,47,0,30,24	1/1:0,9,0:10:255,30,0,177,29,152
-chr21	25596675	chr21:25596675:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,48:50:255,149,0	0/1:25,23:51:255,0,255	1/1:0,54:55:255,162,0
-chr21	25598857	chr21:25598857:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24,0:30:255,78,0,255,86,255	1/2:2,15,10:31:255,146,239,255,0,255	1/1:0,28,0:32:255,95,0,255,95,255
-chr21	25600396	chr21:25600396:M	AAAAAAAAAAAAAAAAAAAAAA	<23>,<26>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,1:4:56,55,54,9,9,0	1/1:0,4,0:4:66,12,0,78,12,118	2/2:0,0,5:5:141,141,141,15,15,0
-chr21	25600576	chr21:25600576:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:24:255,72,0	0/1:14,9:28:174,0,255	1/1:0,23:24:255,69,0
-chr21	25611041	chr21:25611041:M	AAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,91,255	0/1:21,15:38:161,0,255	0/0:30,1:33:0,78,255
-chr21	25612118	chr21:25612118:M	TATATATATATATACGTATATATATACGTATATATA	<12>,<19>	.	.	Motif=TA	GT:AD:DP:PL	0/2:12,0,8:20:97,155,255,0,231,175	0/1:10,20,1:31:255,0,227,255,162,255	2/2:0,0,16:21:255,255,255,47,48,0
-chr21	25613552	chr21:25613552:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,23,0:39:255,0,159,255,255,255	0/2:8,2,11:21:250,250,255,0,103,187	1/1:0,31,0:34:255,97,0,255,99,255
-chr21	25614426	chr21:25614426:M	AAAAAAAAAAAAAAAACAAAAACAAAAAACAAACAAACAAAAAAAAACAAAGAAAAAAAGAAAAAAGAAAAGAAAAAGAAAAAA	<78>,<79>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:57,41,36,6,6,0	1/1:0,6,0:6:178,18,0,119,18,103	2/2:0,0,4:5:126,90,78,14,14,0
-chr21	25615130	chr21:25615130:M	CTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16>,<17>,<23>	.	.	Motif=CT	GT:AD:DP:PL	1/2:0,13,10,0:24:255,190,118,255,0,190,255,190,255,255	2/3:0,1,17,15:33:255,255,255,255,255,255,255,255,0,255	1/1:0,24,0,0:27:255,80,0,255,78,255,255,80,255,255
-chr21	25625815	chr21:25625815:M	AATAATAATAATAAT	<4>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,3:3:58,9,0	.	.
-chr21	25631295	chr21:25631295:M	TCTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTT	<4.8>	.	.	Motif=TCTTTT	GT:AD:DP:PL	1/1:0,23:24:255,70,0	0/1:4,7:11:94,0,40	1/1:0,13:14:248,40,0
-chr21	25633261	chr21:25633261:M	AAAAAAAAAAGAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:36:0,69,255	0/1:24,20:44:222,0,255	0/0:37,0:37:0,109,255
-chr21	25633939	chr21:25633939:M	AAAAAAAAAAAAAAA	<17>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,1,4:5:133,133,132,69,69,56,18,18,0,3	1/1:1,10,1,0:15:255,8,0,242,10,255,255,29,255,255	2/3:0,0,7,4:11:255,255,255,69,69,37,120,119,0,88
-chr21	25640796	chr21:25640796:M	CTTTCTCTTTCTTCTTTCTTTCTCTCTCTCTTTCT	<6.5>	.	.	Motif=CTTTCT	GT:AD:DP:PL	1/1:0,12:19:165,34,0	0/0:11,0:17:0,31,152	1/1:0,21:25:255,59,0
-chr21	25641596	chr21:25641596:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	0/1:23,18:42:201,0,255	1/1:0,39:39:255,115,0
-chr21	25644867	chr21:25644867:M	TTTGTTTGTTTGTTTGTTTGTTTGTTT	<5.8>,<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,31,0:31:255,92,0,255,93,255	1/2:0,19,15:34:255,255,255,255,0,255	1/1:0,36,0:36:255,106,0,255,108,255
-chr21	25648444	chr21:25648444:M	GTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:10,13:26:255,0,212	0/0:30,0:32:0,95,255
-chr21	25651062	chr21:25651062:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,3,3:10:31,7,54,18,0,71	0/1:4,0,1:8:6,0,42,11,28,55	1/2:1,1,2:5:26,15,38,13,0,30
-chr21	25655915	chr21:25655915:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,1:49:0,126,255	0/1:27,21:50:225,0,255	0/0:36,3:40:0,62,255
-chr21	25659255	chr21:25659255:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,25:36:255,0,61	0/1:21,17:39:187,0,255	1/1:0,34:35:255,102,0
-chr21	25660760	chr21:25660760:M	ATATATATATATATATATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,5:11:75,0,93	.	0/1:5,3:12:29,0,141
-chr21	25669372	chr21:25669372:M	AAAAAAAAGAAAAAAAAGAAAAAAAGAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/1:7,16:23:255,0,125	0/0:31,0:31:0,93,255
-chr21	25680769	chr21:25680769:M	TGGATGGATGGATGGATGGATGGATGACGATCGATGGATGGATGGATGGATGG	<12.2>	.	.	Motif=TGGA	GT:AD:DP:PL	0/1:12,15:27:205,0,151	0/0:16,0:16:0,47,255	1/1:0,25:26:255,76,0
-chr21	25685525	chr21:25685525:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0,0:3:0,9,85,9,60,52	0/2:3,0,4:7:46,55,127,0,49,29	1/2:1,3,3:8:104,26,38,42,0,39
-chr21	25686445	chr21:25686445:M	TATGTGTATGTGT	<1.8>	.	.	Motif=TATGTG	GT:AD:DP:PL	0/1:23,27:50:255,0,255	0/0:39,0:39:0,117,255	1/1:0,53:53:255,159,0
-chr21	25688244	chr21:25688244:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<21>,<26>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,13,0:27:255,0,255,255,255,255	0/2:9,0,7:20:149,180,255,0,243,226	1/1:0,18,0:18:255,54,0,255,54,255
-chr21	25688291	chr21:25688291:M	CACACGCACGCACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,18:39:219,0,255	0/0:33,0:34:0,97,255	1/1:0,24:24:255,71,0
-chr21	25689013	chr21:25689013:M	TTTTTTGTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,20:35:255,0,146	0/0:48,0:49:0,143,255	1/1:0,45:46:255,135,0
-chr21	25692007	chr21:25692007:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,9:22:187,161,255,0,223,255	0/1:14,8,0:22:75,0,180,117,241,255	2/2:0,1,15:18:255,255,255,50,34,0
-chr21	25694836	chr21:25694836:M	AAAAAAAAAAAAAATAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,2:30:0,51,255	0/1:12,8:23:94,0,145	0/0:25,1:27:0,61,255
-chr21	25694969	chr21:25694969:M	TTTTTCTTTCTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,12:18:166,0,57	0/0:17,1:19:0,38,255	1/1:3,20:24:255,6,0
-chr21	25697008	chr21:25697008:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:11:0,32,198	0/1:7,2:10:5,0,100	0/1:9,3:12:17,0,123
-chr21	25697952	chr21:25697952:M	CTCTCTCTCTCGCTCTCTCTC	<9.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:33,1:35:0,82,255	0/0:33,0:33:0,90,255	0/1:13,16:31:108,0,76
-chr21	25700317	chr21:25700317:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,1:49:0,126,255	0/1:23,17:42:190,0,255	0/0:46,1:47:0,120,255
-chr21	25701925	chr21:25701925:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,3:40:0,63,255	0/1:17,24:42:255,0,180	0/0:37,2:40:0,82,255
-chr21	25703769	chr21:25703769:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:51:255,139,0	0/1:16,17:39:255,0,255	1/1:0,25:35:255,101,0
-chr21	25715986	chr21:25715986:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9,1:10:172,29,0,145,12,142	1/2:0,3,3:6:123,51,34,42,0,33	0/1:2,4,1:8:61,0,15,41,18,93
-chr21	25720457	chr21:25720457:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:15:234,26,0	1/1:1,10:12:143,7,0	0/1:3,12:15:167,0,9
-chr21	25731407	chr21:25731407:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:19:255,55,0	1/1:0,27:27:255,78,0	1/1:0,34:34:255,99,0
-chr21	25742760	chr21:25742760:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,33:34:255,255,255,82,100,0	1/2:0,17,12:30:255,178,124,255,0,224	2/2:0,0,33:33:255,255,255,97,97,0
-chr21	25743585	chr21:25743585:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,3:34:0,44,255	0/1:12,19:33:239,0,116	0/0:30,2:35:0,66,255
-chr21	25744043	chr21:25744043:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:12:9,0,121	0/0:1,0:1:0,3,17	1/1:1,7:9:101,6,0
-chr21	25746010	chr21:25746010:M	TTTTTTTTTTTCTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,2:40:0,81,255	0/1:16,19:35:234,0,180	0/0:36,0:36:0,106,255
-chr21	25755433	chr21:25755433:M	AAAAAAAAAAAAAAAAAAAAA	<15>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0,1:7:0,21,182,3,106,87	0/2:4,0,6:10:70,98,250,0,67,38	1/2:1,14,2:18:255,9,16,255,0,255
-chr21	25756195	chr21:25756195:M	TTTTTATTTTTA	<1.3>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/1:21,34:55:255,0,255	0/1:25,21:46:255,0,255	0/0:47,0:47:0,141,255
-chr21	25775232	chr21:25775232:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:48:0,132,255	0/1:21,15:38:174,0,255	0/0:48,2:50:0,111,255
-chr21	25780241	chr21:25780241:M	TGAATGAATGA	<1.8>	.	.	Motif=TGAA	GT:AD:DP:PL	0/0:49,0:49:0,145,255	0/1:24,22:46:255,0,255	0/0:38,0:38:0,112,255
-chr21	25784517	chr21:25784517:M	GTTTGTTTGTTT	<2.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:21,0:22:0,35,97	0/1:15,17:36:33,0,10	0/0:26,0:26:0,46,125
-chr21	25784526	chr21:25784526:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:17:0,16,215	0/1:4,17:23:214,0,9	0/0:19,1:20:0,42,255
-chr21	25785745	chr21:25785745:M	TTTTCTTTTCTT	<1.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,49:49:255,147,0	1/1:0,39:39:255,117,0
-chr21	25786151	chr21:25786151:M	AAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,0,24:44:255,255,255,0,255,235	0/1:18,22,0:42:255,0,255,255,255,255	0/2:23,0,24:49:255,255,255,0,255,255
-chr21	25789328	chr21:25789328:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:20:0,23,255	0/0:20,3:25:0,3,255	0/1:17,7:27:46,0,255
-chr21	25797941	chr21:25797941:M	AAAAAAAAAAAAATAAATAAATAAATAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,74,255	0/1:12,7:19:125,0,255	0/0:21,0:22:0,65,255
-chr21	25800869	chr21:25800869:M	CAAAAAAACAAACAAACAAA	<4>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:21,15:36:181,0,255	0/0:40,0:40:0,118,255	1/1:0,31:31:255,92,0
-chr21	25800972	chr21:25800972:M	TTTTTTTCTTTTCTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:17,14:33:169,0,203	0/0:16,1:17:0,32,255
-chr21	25804875	chr21:25804875:M	CCCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/1:10,8:18:192,0,210	0/0:19,0:19:0,57,255
-chr21	25805640	chr21:25805640:M	TGTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTT	<6.4>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:14,21:36:255,0,255	0/1:12,19:32:255,0,228
-chr21	25808500	chr21:25808500:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:26:188,0,255	0/1:9,7:18:148,0,186	0/1:11,7:20:134,0,243
-chr21	25809875	chr21:25809875:M	CTCTCTCTCTCGCTTTCTCTCTC	<6.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:21,25:46:255,0,255	0/1:12,29:41:255,0,206	0/0:33,0:33:0,99,255
-chr21	25815569	chr21:25815569:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:5:18,0,27	0/1:7,3:11:15,0,86	0/1:7,4:12:37,0,76
-chr21	25816582	chr21:25816582:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:41:255,0,253	0/1:19,13:32:136,0,241	0/0:48,0:49:0,144,255
-chr21	25819113	chr21:25819113:M	TTTTTCTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:19,0:20:0,58,255	0/1:8,10:20:120,0,103
-chr21	25819625	chr21:25819625:M	ACACACACACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,10:18:245,0,153	0/1:1,12:18:255,0,27	0/1:4,12:17:255,0,66
-chr21	25825746	chr21:25825746:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:33:167,0,250	1/1:0,27:27:255,79,0	0/1:27,23:51:255,0,255
-chr21	25826419	chr21:25826419:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,8,3:17:143,8,54,129,0,242	1/1:2,17,0:25:255,37,0,255,68,255	0/2:5,0,7:14:107,142,255,0,75,49
-chr21	25830138	chr21:25830138:M	AAATAAATAAATAAATAAATAAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:35,0:35:0,103,255	0/1:15,13:28:162,0,200
-chr21	25836137	chr21:25836137:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:34,6,0	0/1:1,4:6:50,0,2	1/1:0,3:4:50,9,0
-chr21	25855579	chr21:25855579:M	AAAAAAAAAAAAA	<10>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10,7:30:184,0,255,158,67,255	0/1:10,9,4:28:162,0,255,159,91,255	0/2:20,5,10:36:31,3,255,0,128,162
-chr21	25855607	chr21:25855607:M	ACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:37:0,90,255	0/1:15,10:35:35,0,196	0/0:26,0:34:0,76,255
-chr21	25860626	chr21:25860626:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3,1:8:68,0,65,38,38,73	1/2:1,3,4:8:111,40,57,33,0,28	0/1:5,4,2:14:109,0,107,63,57,119
-chr21	25865507	chr21:25865507:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,7,0:14:205,0,140,133,160,255	1/1:0,5,0:10:245,27,0,182,27,166	0/2:4,3,6:16:201,51,151,0,63,95
-chr21	25866543	chr21:25866543:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,7:16:84,0,99	1/1:2,12:16:177,3,0	0/1:17,12:30:130,0,230
-chr21	25867440	chr21:25867440:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,4,8:20:140,42,197,0,35,64	1/2:0,14,7:22:255,101,56,246,0,187	0/2:5,1,10:17:144,130,255,0,76,48
-chr21	25873196	chr21:25873196:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6,0:17:57,0,131,89,173,255	1/2:2,5,5:12:152,49,49,37,0,72	0/1:9,7,0:18:71,0,118,102,163,255
-chr21	25873977	chr21:25873977:M	TTTTTTTTTTTTTTTTT	<18>,<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,7,0,5:14:227,120,112,178,89,191,107,0,134,185	0/2:1,0,5,1:7:142,95,95,0,17,9,68,71,10,79	1/3:1,11,2,6:21:255,163,136,231,85,234,181,0,172,255
-chr21	25877608	chr21:25877608:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<8>,<9>	.	.	Motif=TAAA	GT:AD:DP:PL	1/2:0,13,3:16:255,50,11,250,0,207	1/1:0,14,0:14:255,42,0,255,41,255	1/2:0,19,10:29:255,161,104,255,0,255
-chr21	25880010	chr21:25880010:M	TTTATTTATTTATTTATTTATTTATTTATTTATT	<6.5>,<9.5>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,4,4:8:169,76,93,104,0,93	1/1:0,6,0:6:168,18,0,170,18,171	1/2:0,3,3:6:125,56,71,78,0,69
-chr21	25887518	chr21:25887518:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,15:29:255,0,63	0/1:2,11:19:255,0,43	0/1:5,12:22:255,0,88
-chr21	25890723	chr21:25890723:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:171,21,0	0/1:5,3:9:52,0,122	1/1:0,6:8:176,23,0
-chr21	25892047	chr21:25892047:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,9,7:20:255,72,92,133,0,119	1/2:1,9,7:17:255,84,82,136,0,106	1/2:1,17,10:29:255,132,103,255,0,229
-chr21	25892950	chr21:25892950:M	AAAAAAAAAAAACAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,14:28:255,255,184,255,0,184	0/2:14,0,15:29:255,255,255,0,255,255	1/2:0,17,16:33:255,255,199,255,0,218
-chr21	25895111	chr21:25895111:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/1:20,26:50:255,0,255	0/1:25,28:56:255,0,255
-chr21	25895177	chr21:25895177:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:21:255,0,159	0/1:12,17:29:255,0,249	0/1:12,16:29:255,0,250
-chr21	25896414	chr21:25896414:M	ACACTCACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:21,24:47:219,0,185	0/1:17,17:38:138,0,156	0/1:22,21:43:181,0,195
-chr21	25900988	chr21:25900988:M	AAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:7,16:24:255,0,132	1/1:0,23:23:255,69,0
-chr21	25901297	chr21:25901297:M	AAAAAAAAAAAAAAAAAAAAAACAAAA	<15>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,1:6:83,83,83,15,15,0	1/1:0,21,1:24:255,66,0,255,27,255	2/2:0,0,3:4:101,101,101,12,12,0
-chr21	25901399	chr21:25901399:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47:48:255,141,0	0/1:23,25:48:255,0,255	1/1:1,46:49:255,115,0
-chr21	25908693	chr21:25908693:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,30:36:255,0,4	1/1:3,30:34:255,44,0	1/1:5,35:40:255,28,0
-chr21	25924380	chr21:25924380:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,15:18:223,0,2	1/1:2,16:18:244,18,0	1/1:1,10:11:162,14,0
-chr21	25927003	chr21:25927003:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:10,3,0	.	1/1:0,3:3:78,9,0
-chr21	25928343	chr21:25928343:M	AAACAAACAAACAAACAAACAAACAAACAAAAAAAC	<10>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:1,26:27:255,61,0	1/1:0,27:27:255,80,0
-chr21	25928754	chr21:25928754:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:18:255,45,0	1/1:0,14:18:255,50,0	1/1:0,20:26:255,43,0
-chr21	25930587	chr21:25930587:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,27:28:255,82,0	0/1:17,9:26:84,0,229	0/1:17,15:32:182,0,222
-chr21	25935840	chr21:25935840:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:44,8,0	1/1:0,5:5:81,15,0	0/1:1,3:4:39,0,5
-chr21	25946667	chr21:25946667:M	AAAAATAAAAATAAAAATAAAAATAAAAATAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:233,0,255	0/0:29,0:29:0,87,255	0/1:17,18:35:255,0,255
-chr21	25951141	chr21:25951141:M	GGCCAGGGCCAG	<2.2>	.	.	Motif=GGCCAG	GT:AD:DP:PL	1/1:0,35:35:255,97,0	1/1:0,49:49:255,136,0	1/1:0,50:50:255,138,0
-chr21	25952192	chr21:25952192:M	ACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,8:28:55,0,250	0/1:22,12:35:94,0,255	0/1:17,10:27:88,0,204
-chr21	25952379	chr21:25952379:M	TTTTTTTTTTTCTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,40:43:255,71,0	1/1:2,27:29:255,50,0	1/1:2,31:33:255,61,0
-chr21	25964595	chr21:25964595:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,13:16:186,0,7	0/1:3,4:7:48,0,31	0/1:7,10:17:126,0,73
-chr21	25968323	chr21:25968323:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,3:16:3,0,169	0/0:11,1:12:0,19,159	0/1:8,5:14:41,0,99
-chr21	25969834	chr21:25969834:M	GAAAAGAAAAGAAAAGAAAACAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGAAGA	<12.8>	.	.	Motif=GAAAA	GT:AD:DP:PL	1/1:0,5:6:89,17,0	1/1:0,4:5:74,14,0	0/0:6,1:7:0,5,80
-chr21	25980661	chr21:25980661:M	AAACAAACAAACAAAAAACAAAACAAACAAACAAAAAACA	<9.2>,<10.2>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,0,48:48:255,255,255,144,142,0	1/2:0,12,23:35:255,255,255,217,0,116	2/2:0,0,28:28:255,255,255,84,83,0
-chr21	25981712	chr21:25981712:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:12:17,0,120	0/1:11,10:22:103,0,120	0/1:12,3:18:6,0,172
-chr21	25989923	chr21:25989923:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,3:43:0,71,255	0/1:20,28:49:255,0,221	0/0:44,3:47:0,84,255
-chr21	25990438	chr21:25990438:M	AGCAATAGCAATA	<2.7>	.	.	Motif=AGCAAT	GT:AD:DP:PL	0/0:43,0:43:0,129,255	0/1:20,21:41:255,0,255	0/0:47,0:47:0,141,255
-chr21	25992388	chr21:25992388:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:7,25:33:255,0,35	0/0:28,0:31:0,90,255
-chr21	25995945	chr21:25995945:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:26,14:42:135,0,255	0/0:46,0:46:0,136,255
-chr21	25998391	chr21:25998391:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,2,12:27:150,187,255,0,149,161	0/1:11,14,2:29:174,0,130,215,125,255	0/2:15,1,10:27:110,166,255,0,206,200
-chr21	26007431	chr21:26007431:M	TATATTTATAAATTATATATTATATACTATATATTACAATATATAATTATATA	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,3:12:99,0,151	0/0:1,0:1:0,3,25	0/1:6,1:7:21,0,128
-chr21	26009580	chr21:26009580:M	TTTTTCTTTTCTTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,20:22:255,43,0	0/1:14,16:31:195,0,154	1/1:1,22:23:255,50,0
-chr21	26012976	chr21:26012976:M	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAACAAACAAAA	<7>	.	.	Motif=AACAA	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,26:26:255,78,0	1/1:0,30:30:255,90,0
-chr21	26013483	chr21:26013483:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:2,42:46:255,99,0	1/1:1,43:46:255,108,0
-chr21	26016931	chr21:26016931:M	GGGGGGCGGGGGGCGGGGGGCGGGGGG	<10>,<19>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,26,0:26:255,78,0,255,78,255	1/2:0,11,4:15:255,104,71,255,0,255	1/1:0,37,0:37:255,111,0,255,111,255
-chr21	26017199	chr21:26017199:M	AAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:119,12,0	1/1:0,1:2:29,3,0	1/1:0,3:4:88,10,0
-chr21	26017410	chr21:26017410:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:115,20,0	0/1:3,12:15:158,0,7	1/1:0,7:9:131,23,0
-chr21	26021047	chr21:26021047:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:13:215,38,0	0/1:4,6:11:79,0,35	1/1:1,5:8:80,3,0
-chr21	26028177	chr21:26028177:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:25:0,42,255	0/1:12,11:25:135,0,130	0/0:26,2:30:0,52,255
-chr21	26032795	chr21:26032795:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,25,15:40:255,198,123,255,0,255	2/2:0,0,21:21:255,255,255,61,61,0	0/1:14,22,1:37:255,0,255,255,201,255
-chr21	26034639	chr21:26034639:M	AAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAGAAAAGAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:172,17,0	1/1:1,10:14:183,23,0	1/1:0,6:7:114,20,0
-chr21	26040606	chr21:26040606:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:12:82,0,47	0/1:10,6:16:56,0,125	0/1:14,4:18:18,0,195
-chr21	26040762	chr21:26040762:M	AAACAAACAAACAAACAAACAAACAAACA	<8.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/1:17,17:34:209,0,209	0/1:15,18:33:242,0,185
-chr21	26054621	chr21:26054621:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:96,17,0	0/1:4,4:8:42,0,42	0/1:3,2:7:13,0,53
-chr21	26057467	chr21:26057467:M	CACACACCACACACACACACACACACACACACAC	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:30:0,85,255	0/1:15,18:36:213,0,187	0/0:23,0:24:0,70,255
-chr21	26059891	chr21:26059891:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,0,0	.	1/1:0,4:6:145,18,0
-chr21	26062231	chr21:26062231:M	ACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,11:25:195,0,255	0/1:14,7:22:125,0,255	0/0:27,0:30:0,74,255
-chr21	26062662	chr21:26062662:M	AAATAAATAAATAAATAAATAAATAAATAAATA	<9.2>,<11.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,12,3:15:255,79,43,229,0,255	0/2:11,0,6:17:127,157,255,0,198,255	1/1:0,20,0:20:255,59,0,255,60,255
-chr21	26068364	chr21:26068364:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:20:90,0,255	0/1:11,13:28:255,0,217	0/0:18,1:20:0,30,255
-chr21	26074751	chr21:26074751:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,23:43:255,0,235	1/1:0,40:40:255,117,0	0/1:22,21:43:246,0,255
-chr21	26077063	chr21:26077063:M	AAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,14:21:255,24,0	1/1:0,18:19:255,53,0	1/1:1,19:20:255,41,0
-chr21	26079045	chr21:26079045:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,1,2:9:9,17,121,0,71,93	0/1:1,3,0:6:38,0,6,42,6,81	0/2:6,1,5:13:51,59,183,0,61,80
-chr21	26080770	chr21:26080770:M	AAAAAAAAAAAAAAAGAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:16,12:28:120,0,188	0/0:22,1:24:0,50,255
-chr21	26082231	chr21:26082231:M	AAATAAATAAATAAATAAATAA	<6.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:19,9:28:83,0,255	0/1:15,26:41:255,0,162
-chr21	26084228	chr21:26084228:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:23,5,0	1/1:0,3:4:99,12,0	.
-chr21	26086563	chr21:26086563:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,45,0:46:255,117,0,255,135,255	1/2:1,19,21:41:255,255,249,255,0,225	1/1:3,28,4:35:255,48,0,255,29,255
-chr21	26105069	chr21:26105069:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,6:10:84,89,177,2,22,0	1/2:0,5,3:10:193,47,51,129,0,108	0/2:3,0,4:10:53,58,181,0,49,27
-chr21	26108608	chr21:26108608:M	CGGGTGCGGGTG	<1.8>	.	.	Motif=CGGGTG	GT:AD:DP:PL	1/1:0,40:40:255,111,0	1/1:0,48:48:255,133,0	1/1:0,43:43:255,119,0
-chr21	26111088	chr21:26111088:M	AAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,0:11:0,33,255	0/1:2,5:10:124,0,51	0/0:5,0:8:0,23,179
-chr21	26118885	chr21:26118885:M	AAAAAAAAATGAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:33:211,0,189	0/1:16,17:38:198,0,190	0/1:22,13:36:137,0,255
-chr21	26119686	chr21:26119686:M	ACACACACACACACACACACATATACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,19:39:248,0,255	0/1:24,17:41:184,0,255	0/1:14,11:26:128,0,192
-chr21	26126978	chr21:26126978:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,16:29:213,0,157	0/0:38,0:39:0,112,255	0/1:24,11:38:90,0,255
-chr21	26127200	chr21:26127200:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:35:199,0,255	0/1:22,23:46:255,0,255	0/1:20,28:50:255,0,231
-chr21	26131906	chr21:26131906:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,108,255	0/1:22,15:39:255,0,255	0/0:44,0:48:0,138,255
-chr21	26136134	chr21:26136134:M	AAAGAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAAGAAA	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,7:7:78,19,0	.	1/1:0,4:4:44,11,0
-chr21	26138527	chr21:26138527:M	AAAAAAAAAAAAAAAAA	<14>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,11,9:20:255,255,255,143,166,110,204,175,0,148	1/3:1,18,1,12:32:255,194,255,255,203,255,255,0,255,255	2/3:2,0,17,8:27:255,255,255,88,164,91,255,255,0,232
-chr21	26138695	chr21:26138695:M	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	<6.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/1:15,15:30:184,0,184	0/0:41,0:41:0,121,255
-chr21	26139880	chr21:26139880:M	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAA	<8.5>,<9.5>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,1,32:33:255,255,255,97,78,0	1/2:0,15,14:29:255,216,171,255,0,189	2/2:0,1,31:32:255,255,255,94,76,0
-chr21	26150598	chr21:26150598:M	TAGATAGACAGATAGATAGACAGATAGATAGA	<10>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:9,7:19:120,0,166	0/1:10,1:20:3,0,196	0/1:10,20:33:255,0,148
-chr21	26153456	chr21:26153456:M	TTGTTGTTGTTGTTGTT	<6.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:11,12:23:164,0,145	0/0:35,0:35:0,103,255	0/1:13,21:34:255,0,144
-chr21	26156001	chr21:26156001:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,4:11:46,0,72	0/0:6,1:8:0,6,92	0/1:3,3:9:39,0,37
-chr21	26162910	chr21:26162910:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,7:25:59,0,255	0/0:36,0:40:0,116,255	0/1:24,14:38:148,0,255
-chr21	26163066	chr21:26163066:M	AAAAAAAAAAAAAACAAAAACAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,10:23:115,0,171	0/1:15,17:34:198,0,180	0/1:9,4:13:33,0,123
-chr21	26164856	chr21:26164856:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:9,11:22:139,0,88	0/0:23,1:25:0,56,255
-chr21	26164894	chr21:26164894:M	AAAAAAAGAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:151,0,187	0/0:42,1:44:0,111,255	0/1:12,13:26:163,0,153
-chr21	26166872	chr21:26166872:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAAAGAGACAGAG	<19.5>,<20.5>	.	.	Motif=GA	GT:AD:DP:PL	0/2:9,3,9:23:255,74,255,0,207,205	0/1:7,12,0:19:255,0,142,128,174,255	0/2:4,0,15:22:255,162,255,0,132,92
-chr21	26166928	chr21:26166928:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<15>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,13,1:35:121,0,205,194,255,255	0/2:11,0,12:23:243,255,255,0,164,225	0/1:16,18,0:36:189,0,148,255,248,255
-chr21	26172797	chr21:26172797:M	AAAAAAAAGAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:41:255,121,0	1/1:1,33:34:255,82,0	0/1:17,17:34:214,0,216
-chr21	26180161	chr21:26180161:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:17:55,0,143	0/0:13,1:15:0,27,210	0/1:9,10:21:122,0,96
-chr21	26186140	chr21:26186140:M	TTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:88,15,0	0/1:3,2:7:22,0,41	0/1:4,4:9:43,0,54
-chr21	26192948	chr21:26192948:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,21:40:255,0,243	0/1:17,10:27:100,0,225	0/0:38,0:38:0,112,255
-chr21	26193424	chr21:26193424:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,2:21:0,25,255	0/1:10,10:24:143,0,103	0/1:14,12:26:137,0,173
-chr21	26193552	chr21:26193552:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:13:0,4,254	0/1:8,11:21:255,0,164	0/1:9,8:18:173,0,204
-chr21	26193721	chr21:26193721:M	TTTTTTTTGTTCTGTTTTTTTTTTTTTTTTT	<45>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:7:98,13,0	1/1:0,0:4:0,0,0	1/1:0,8:12:235,27,0
-chr21	26194289	chr21:26194289:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:22,0,30:52:255,255,255,0,255,255	0/1:12,22,1:37:255,0,255,255,211,255	1/2:0,21,19:40:255,255,234,255,0,255
-chr21	26197508	chr21:26197508:M	ATACATACATACATACATACATACATACATACATACATACATGCATACATA	<8.8>,<10.8>,<11.8>	.	.	Motif=ATAC	GT:AD:DP:PL	2/3:0,0,9,14:23:255,255,255,189,230,162,146,147,0,80	1/3:0,12,2,16:30:255,255,255,255,219,255,255,0,255,255	1/2:0,15,8,0:24:255,206,161,255,0,255,255,127,255,255
-chr21	26198424	chr21:26198424:M	AAAAAAAAAAAAAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:25:200,0,97	1/1:0,24:24:255,70,0	0/1:19,14:34:155,0,239
-chr21	26198462	chr21:26198462:M	TTTCTTTTTTTTTCTTTT	<1.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:14,16:31:255,0,255	0/1:19,17:36:255,0,255	1/1:0,46:46:255,138,0
-chr21	26202002	chr21:26202002:M	AACAACAACAA	<2.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:15,29:44:255,0,161	0/0:46,0:46:0,135,255	0/1:32,31:63:255,0,255
-chr21	26208416	chr21:26208416:M	AATTTTATTTTTAATTTT	<3.2>	.	.	Motif=AATTTT	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:9,8:17:147,0,172	0/1:21,13:34:220,0,255
-chr21	26209215	chr21:26209215:M	TTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/1:8,11:19:144,0,89	0/1:15,15:30:194,0,194
-chr21	26215457	chr21:26215457:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,8:12:104,0,35	0/1:0,1:5:7,0,16	0/1:1,8:10:107,0,1
-chr21	26216604	chr21:26216604:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,6:24:38,0,247	0/1:7,2:11:3,0,110	1/1:0,11:12:183,24,0
-chr21	26226509	chr21:26226509:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:96,6,0	1/1:0,3:5:61,11,0	0/1:1,4:5:53,0,2
-chr21	26226711	chr21:26226711:M	AGAGAGAAAGAGAGAGAGA	<3.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:23,26:49:255,0,255	0/1:22,26:48:255,0,255	0/0:41,0:41:0,123,255
-chr21	26226759	chr21:26226759:M	AAAAAGAAAAGAAAAGAAATAAAAAAAGAAAAAAGAAAGAAAAAAGAAAA	<22>,<49>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,17:37:255,197,255,255,0,255	1/2:0,9,10:27:255,114,221,201,0,174	1/2:0,9,15:28:255,172,255,200,0,159
-chr21	26235433	chr21:26235433:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,28:44:255,0,99	0/0:34,1:36:0,88,255	0/1:16,17:35:228,0,192
-chr21	26236885	chr21:26236885:M	TGCCCATGCCCA	<1.8>	.	.	Motif=TGCCCA	GT:AD:DP:PL	1/1:0,28:31:255,78,0	1/1:0,23:25:255,64,0	1/1:0,39:40:255,108,0
-chr21	26241099	chr21:26241099:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,7:8:206,127,106,24,6,0	1/2:0,3,12:15:255,199,158,51,0,6	1/2:2,4,9:16:255,104,127,16,0,27
-chr21	26241264	chr21:26241264:M	TTTTGTTTTTTTTTTTATTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:1,13:15:218,26,0	1/1:1,16:17:255,32,0
-chr21	26242421	chr21:26242421:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,24:40:255,0,206	0/0:25,0:26:0,78,255	0/1:13,18:37:255,0,255
-chr21	26243631	chr21:26243631:M	TTTTTCTTTCTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,15:32:191,0,226	0/0:39,0:39:0,115,255	0/1:11,14:25:186,0,128
-chr21	26247353	chr21:26247353:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,27,22:49:255,255,255,255,0,255	2/2:0,2,51:53:255,255,255,156,120,0	1/2:0,29,35:64:255,255,255,255,0,255
-chr21	26249109	chr21:26249109:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:19:137,0,70	0/1:12,4:18:26,0,161	0/1:9,10:19:120,0,101
-chr21	26252985	chr21:26252985:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:9:36,0,53	0/0:4,1:6:0,1,61	1/1:0,3:5:40,1,0
-chr21	26256744	chr21:26256744:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:7:124,21,0	.	1/1:0,7:7:122,21,0
-chr21	26259758	chr21:26259758:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,4:16:255,42,36,165,0,141	0/2:2,1,6:9:85,67,115,0,17,8	1/2:1,6,8:16:249,99,103,92,0,67
-chr21	26262784	chr21:26262784:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:145,0,180	0/0:26,0:28:0,81,255	0/1:12,15:29:187,0,144
-chr21	26264705	chr21:26264705:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,44:45:255,114,0	1/1:0,40:40:255,118,0	1/1:2,60:62:255,146,0
-chr21	26268884	chr21:26268884:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,54:57:255,148,0	1/1:1,33:37:255,90,0	1/1:4,49:54:255,86,0
-chr21	26270944	chr21:26270944:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,49:50:255,147,0	1/1:0,45:45:255,132,0	1/1:0,40:40:255,118,0
-chr21	26279778	chr21:26279778:M	AAAAGAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:30:255,0,119	1/1:1,30:32:255,76,0	0/1:16,10:27:104,0,223
-chr21	26280552	chr21:26280552:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:14:69,0,78	1/1:1,12:15:196,24,0	0/1:9,4:15:44,0,114
-chr21	26280623	chr21:26280623:M	AAAAAAAAAAACAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,19:32:242,0,137	1/1:0,19:19:255,56,0	0/0:21,4:25:0,4,255
-chr21	26284281	chr21:26284281:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,8:21:83,0,155	0/1:3,15:20:198,0,12	0/1:12,7:20:67,0,157
-chr21	26287412	chr21:26287412:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:11:0,6,248	0/0:14,0:19:0,55,255	0/1:9,4:13:70,0,207
-chr21	26288931	chr21:26288931:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGCATGCATGTATGCATGCATGCATGTATGTATGTATGTATGTATGTATGTATGTAT	<12.8>,<15.8>,<16.8>	.	.	Motif=TATG	GT:AD:DP:PL	1/2:0,4,2,0:10:124,38,23,74,0,63,111,29,74,106	2/3:0,0,2,3:5:102,98,95,45,45,32,30,29,0,16	1/2:0,3,3,0:8:123,56,43,55,0,42,105,43,55,98
-chr21	26289027	chr21:26289027:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<14.8>,<16.8>,<17.8>	.	.	Motif=TATC	GT:AD:DP:PL	2/3:0,0,9,8:24:255,255,255,140,140,91,157,157,0,108	0/3:17,0,0,5:22:85,137,255,83,255,255,0,255,255,255	1/2:0,10,6,0:22:255,163,133,255,0,255,255,102,255,255
-chr21	26289692	chr21:26289692:M	TTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:205,24,0	1/1:0,3:6:131,18,0	1/1:0,6:9:210,25,0
-chr21	26291439	chr21:26291439:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:38:255,114,0	1/1:0,32:36:255,99,0	1/1:0,48:50:255,147,0
-chr21	26291833	chr21:26291833:M	AAAAAAAAAAACAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,63,0	1/1:0,20:23:255,65,0	1/1:1,23:25:255,45,0
-chr21	26294961	chr21:26294961:M	TTATTTTATTTTATTTATATTATATTATATTATATTATATTATATTATATTAT	<14.6>,<15.6>	.	.	Motif=TTATA	GT:AD:DP:PL	1/2:0,9,3:12:255,59,23,175,0,140	.	1/2:0,1,1:2:61,19,13,19,0,13
-chr21	26299947	chr21:26299947:M	TTTTTTTGTTTTTTGTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,19:23:255,255,255,63,18,0	1/2:0,3,7:10:255,119,90,51,0,22	2/2:0,0,17:17:255,255,255,51,50,0
-chr21	26311383	chr21:26311383:M	ATATATATATACATGTATATATATATATATGTGCATACATATATACATGTATATATAT	<15>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,5:15:89,0,223	0/0:27,0:27:0,81,255	0/1:7,2:9:26,0,161
-chr21	26311771	chr21:26311771:M	ATATATACACATACATATATACATATATACATATATGTATGTACGTATATATATACATTTATATAT	<10>	.	.	Motif=ATAT	GT:AD:DP:PL	0/1:3,10:13:255,0,38	0/1:5,15:20:255,0,68	1/1:0,16:16:255,48,0
-chr21	26311850	chr21:26311850:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,0,0:34:0,102,255,96,255,255	0/2:13,0,23:39:211,211,255,0,140,66	0/1:13,20,1:35:255,0,220,255,156,255
-chr21	26311874	chr21:26311874:M	TATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:9,1,7:20:54,93,240,0,71,63	0/1:9,10,0:27:115,0,32,172,82,255	1/2:1,11,7:33:194,104,142,134,0,203
-chr21	26325011	chr21:26325011:M	AAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,9,0:25:89,0,207,160,255,255	0/2:14,1,3:22:59,78,255,0,226,255	1/2:1,16,7:25:255,169,134,255,0,255
-chr21	26334783	chr21:26334783:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,24:40:255,0,172	0/0:19,2:21:0,26,255	0/1:15,13:30:159,0,194
-chr21	26334945	chr21:26334945:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<10>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:7,6:13:71,0,89	0/1:3,10:13:150,0,18
-chr21	26351915	chr21:26351915:M	AGAGAGAGAGAGAGAGAGAGTGAGAGAAAGACAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:10,13:23:255,0,202	0/0:26,0:27:0,78,255	0/1:15,14:31:255,0,255
-chr21	26356078	chr21:26356078:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,19:33:255,0,255	0/0:35,0:35:0,105,255	0/1:16,16:32:255,0,255
-chr21	26363925	chr21:26363925:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,20:23:255,48,0	1/1:3,21:24:255,18,0	1/1:0,18:19:255,55,0
-chr21	26365813	chr21:26365813:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,34:34:255,100,0	1/1:0,38:38:255,112,0
-chr21	26367626	chr21:26367626:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:21:84,0,255	1/1:0,16:17:255,51,0	0/1:13,6:22:124,0,255
-chr21	26371726	chr21:26371726:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,8,1:12:255,140,123,21,2,0,152,89,3,125	3/3:0,1,1,11:13:255,255,255,189,172,152,37,6,7,0	1/2:0,3,7,0:11:255,119,87,63,0,32,215,99,62,192
-chr21	26379272	chr21:26379272:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:35,0,34	0/1:1,5:8:72,0,4	1/1:1,7:10:126,12,0
-chr21	26385124	chr21:26385124:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:82,14,0	1/1:2,8:12:124,1,0	1/1:0,8:8:138,23,0
-chr21	26401715	chr21:26401715:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,2:25:0,35,255	0/0:19,0:20:0,58,255	0/1:14,9:23:93,0,182
-chr21	26409615	chr21:26409615:M	ACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,9:25:160,0,255	0/1:12,15:32:255,0,255	0/1:25,9:40:141,0,255
-chr21	26412725	chr21:26412725:M	ACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:9,0,6:17:117,102,234,0,171,228	1/2:0,9,5:14:249,83,43,125,0,110	0/0:13,0,0:14:0,41,236,42,255,255
-chr21	26417907	chr21:26417907:M	TAAAATAAAATAA	<2.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:23,20:43:255,0,255	0/1:15,18:33:255,0,225	0/1:25,19:44:255,0,255
-chr21	26418523	chr21:26418523:M	TGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/1:31,18:52:255,0,255	0/1:20,21:43:255,0,255	0/1:15,32:48:255,0,255
-chr21	26426663	chr21:26426663:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<17.5>,<18.5>,<20.5>	.	.	Motif=AG	GT:AD:DP:PL	0/3:8,0,0,5:14:111,140,255,137,255,255,0,219,219,198	1/3:0,8,1,4:14:255,116,91,222,88,193,234,0,116,219	0/2:3,1,7,0:14:191,95,174,0,77,80,195,176,82,255
-chr21	26428225	chr21:26428225:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:28:255,0,255	1/1:0,25:29:255,80,0	0/1:11,11:24:231,0,243
-chr21	26437131	chr21:26437131:M	GTGTGTGTGTGTGTGTGTGTATGTGTTTGTGT	<24>,<25>	.	.	Motif=GT	GT:AD:DP:PL	0/2:15,1,15:31:255,248,255,0,255,255	1/2:0,12,6:19:255,102,50,203,0,153	0/1:19,6,1:27:106,0,255,87,255,255
-chr21	26443409	chr21:26443409:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,3:30:0,34,255	0/1:10,12:24:137,0,122	0/0:35,0:36:0,105,255
-chr21	26451872	chr21:26451872:M	CACACACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,12:24:147,0,139	1/1:2,18:21:255,27,0	0/0:27,0:27:0,79,255
-chr21	26463243	chr21:26463243:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:25:0,63,255	0/1:11,6:21:106,0,249	0/1:9,4:17:87,0,191
-chr21	26474037	chr21:26474037:M	TTTTTGTTTTCGTTTTTTTTTTTTTTTTG	<4.7>	.	.	Motif=TTTTTG	GT:AD:DP:PL	1/1:0,16:17:255,50,0	1/1:1,23:25:255,56,0	1/1:0,16:17:255,50,0
-chr21	26476577	chr21:26476577:M	CTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAATCTTCTATTATCTATCTATCTATCTA	<17.2>,<21.2>	.	.	Motif=CTAT	GT:AD:DP:PL	0/0:7,0,0:8:0,24,212,23,161,143	0/1:2,5,0:7:123,0,37,129,35,159	2/2:0,0,4:4:74,85,115,12,12,0
-chr21	26480555	chr21:26480555:M	TTTTTCTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:33:255,79,0	1/1:2,20:25:255,37,0	1/1:1,31:34:255,77,0
-chr21	26483413	chr21:26483413:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,22:31:255,0,123	1/1:0,45:46:255,138,0	0/1:12,20:37:255,0,218
-chr21	26486620	chr21:26486620:M	TTTTTTTTTCTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:149,0,226	0/0:42,0:42:0,124,255	0/1:20,13:33:147,0,255
-chr21	26487917	chr21:26487917:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:40:255,113,0	1/1:0,47:48:255,143,0	1/1:0,39:42:255,122,0
-chr21	26487960	chr21:26487960:M	TTTTTTTATTTTGCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30:31:255,93,0	1/1:0,46:47:255,141,0	1/1:0,44:44:255,132,0
-chr21	26488241	chr21:26488241:M	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<12.2>,<13.2>	.	.	Motif=CTTC	GT:AD:DP:PL	0/1:8,7,0:15:89,0,108,113,150,255	1/2:0,16,15:31:255,255,178,241,0,196	0/1:11,8,0:19:92,0,148,125,201,255
-chr21	26492717	chr21:26492717:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,40:42:255,86,0	1/1:1,28:29:255,68,0	1/1:1,44:46:255,117,0
-chr21	26502303	chr21:26502303:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,10,13:24:255,202,169,190,0,125	1/1:0,17,2:22:255,57,0,255,27,255	1/2:0,8,14:24:255,212,185,150,0,87
-chr21	26504225	chr21:26504225:M	TATTTATTTATTTATTTATTTATTT	<8.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:18,17:35:255,0,255	0/0:35,0:35:0,105,255	0/1:16,12:28:255,0,255
-chr21	26511981	chr21:26511981:M	CACACATACACACACACACACACACACACACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,11:33:222,0,255	0/1:8,15:25:255,0,161	0/0:26,0:28:0,83,255
-chr21	26512196	chr21:26512196:M	TTTTTTTATTTATTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:18,10:28:97,0,242	0/0:36,0:36:0,106,255
-chr21	26514067	chr21:26514067:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,34:34:255,100,0	0/1:19,21:40:255,0,227
-chr21	26517115	chr21:26517115:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,5:5:138,15,0	0/0:0,0:1:0,3,13
-chr21	26520114	chr21:26520114:M	ATATATATATATATATATATATATATAT	<9>,<12>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,17,16:34:255,255,255,255,0,255	1/1:0,12,0:13:255,39,0,255,39,255	0/2:7,0,8:17:186,212,255,0,188,159
-chr21	26542278	chr21:26542278:M	TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<25.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,10,10:27:255,249,220,138,0,246	0/1:0,3,0:7:30,0,13,46,25,104	2/2:0,1,12:16:255,255,255,34,10,0
-chr21	26544947	chr21:26544947:M	AACAAAAACAAAAACAAAAA	<1.2>	.	.	Motif=AACAAA	GT:AD:DP:PL	1/1:0,4:4:109,12,0	1/1:0,4:4:110,12,0	1/1:0,2:2:51,6,0
-chr21	26547780	chr21:26547780:M	TTTTTTTTTTTTTTCTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,24,11:35:255,176,103,255,0,255	0/2:13,1,18:33:233,251,255,0,218,145	1/2:0,15,10:27:255,155,105,255,0,218
-chr21	26561314	chr21:26561314:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,12,20:34:255,255,255,210,0,255	0/2:20,1,17:38:187,255,255,0,255,247	0/1:18,19,1:39:241,0,221,255,255,255
-chr21	26567009	chr21:26567009:M	AAAAAAAAAAAAAAAAAAAA	<13>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,20,0,6:29:255,154,113,255,124,255,255,0,255,255	2/3:0,0,5,6:12:255,255,255,101,101,69,86,85,0,54	1/2:0,14,3,0:18:255,90,47,255,0,255,255,60,255,255
-chr21	26571518	chr21:26571518:M	AAACAAACAAACAAACAAACAAA	<4.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:10,15:25:217,0,120	0/0:46,0:46:0,135,255	0/1:17,18:35:236,0,217
-chr21	26581993	chr21:26581993:M	TTTACTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<9>,<12>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,15,0:28:255,0,255,255,248,255	1/2:0,11,4:15:255,72,78,255,0,255	0/0:19,0,0:19:0,57,255,56,255,255
-chr21	26583559	chr21:26583559:M	ACACACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/1:17,15:32:176,0,212	0/1:21,30:51:255,0,240
-chr21	26583616	chr21:26583616:M	TATATATATATATAATGTGTATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:14,12:26:157,0,190	0/1:19,7:26:51,0,255	0/0:21,0:21:0,62,255
-chr21	26584093	chr21:26584093:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/1:16,15:32:172,0,200	0/1:17,20:38:255,0,209
-chr21	26596831	chr21:26596831:M	AAATAAATAAATAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:24,20:44:255,0,255	0/1:12,17:29:255,0,239	0/0:41,0:41:0,123,255
-chr21	26599354	chr21:26599354:M	GTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,6,6:13:255,255,255,163,162,138,159,104,0,138	1/3:1,14,1,5:21:255,124,94,255,118,255,221,0,221,255	1/2:1,14,9,0:24:255,133,81,179,0,178,255,151,245,255
-chr21	26618920	chr21:26618920:M	AAAAAAAAAAAAA	<14>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20,0:37:255,0,190,255,255,255	0/2:11,0,8:19:183,216,255,0,189,255	1/2:1,13,16:32:255,255,255,212,0,255
-chr21	26620910	chr21:26620910:M	GTGTGTGTGCATGCGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:22,0:25:0,63,255	0/1:15,14:33:117,0,132	0/1:15,16:38:145,0,130
-chr21	26626951	chr21:26626951:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:0,0,0	1/1:0,1:4:62,9,0	1/1:0,3:5:123,15,0
-chr21	26628410	chr21:26628410:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,23,15:41:255,242,255,255,0,255	1/2:3,17,18:38:255,255,255,249,0,255	2/2:0,0,29:33:255,255,255,96,98,0
-chr21	26628921	chr21:26628921:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,14:24:255,255,255,220,0,178	2/2:0,0,16:16:255,255,255,48,48,0	1/2:0,7,8:18:255,203,178,214,0,190
-chr21	26629167	chr21:26629167:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,23,11:35:255,193,253,255,0,255	1/1:2,31,0:33:255,61,0,255,93,255	1/2:0,15,16:31:255,255,255,255,0,255
-chr21	26630679	chr21:26630679:M	TGTGTGTGTATGTGTGTGTGTGTGTGT	<11.5>,<12.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,2,14:21:209,164,158,45,19,0	1/1:0,13,0:21:255,48,0,244,44,203	1/2:0,9,18:29:255,187,154,139,0,60
-chr21	26632239	chr21:26632239:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:0,0,0	1/1:0,3:4:108,12,0	1/1:0,2:3:73,6,0
-chr21	26638122	chr21:26638122:M	TATATATATATATATATATACACATATATATATATATATGTATATATAT	<8.5>,<18.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:2,0,5:8:123,131,191,0,60,45	1/2:0,14,6:20:255,156,114,255,0,255	0/1:2,11,0:15:255,0,34,255,67,255
-chr21	26638345	chr21:26638345:M	TATATATATATATATATA	<18>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,3:12:39,0,194	1/1:0,1:1:25,3,0	0/0:15,0:16:0,48,255
-chr21	26639690	chr21:26639690:M	GTGTGTGGGTGTCTATGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<25>,<31>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,3,0,3:9:103,70,61,111,70,141,41,0,71,62	2/3:0,0,2,2:5:100,100,100,49,49,43,51,51,0,45	1/2:0,4,4,0:8:144,101,89,54,0,83,155,101,95,196
-chr21	26642320	chr21:26642320:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/1:19,25:44:255,0,238	0/1:25,18:44:198,0,255	0/0:44,0:44:0,130,255
-chr21	26645859	chr21:26645859:M	ATAAAAACAAAAAAGAAAATAAAAATA	<3.7>	.	.	Motif=ATAAAA	GT:AD:DP:PL	0/1:16,24:40:255,0,255	0/1:15,15:30:255,0,255	0/0:36,0:36:0,108,255
-chr21	26646887	chr21:26646887:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,23:47:255,255,255,255,0,255	1/2:0,14,21:36:255,255,255,255,0,255	2/2:1,0,43:46:255,255,255,117,132,0
-chr21	26650125	chr21:26650125:M	GAAAAAGAAAAGGAAAAAGA	<3.5>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:19,24:43:255,0,255	0/1:28,19:47:255,0,255	0/0:37,0:37:0,110,255
-chr21	26651820	chr21:26651820:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:41:255,0,255	0/1:25,19:46:255,0,255	0/0:40,0:42:0,123,255
-chr21	26653445	chr21:26653445:M	TTTTTTTTTTTTTTTTTT	<13>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,0,11:19:166,214,255,0,108,53	1/2:0,21,5:30:255,93,76,255,0,255	0/2:6,0,9:19:136,182,255,0,113,61
-chr21	26658481	chr21:26658481:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:15,6:22:113,0,255	0/0:32,0:32:0,96,255
-chr21	26665544	chr21:26665544:M	CTTTCTTTCTTTCTTT	<3>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:7,28:35:255,0,24	0/0:41,0:41:0,121,255
-chr21	26679776	chr21:26679776:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:20:0,59,255	1/1:2,18:20:255,24,0	0/0:37,6:44:0,21,255
-chr21	26681384	chr21:26681384:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,19:48:212,0,255	1/1:3,28:32:255,41,0	0/0:51,1:56:0,143,255
-chr21	26697932	chr21:26697932:M	AAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,19:22:255,255,255,0,60,4	0/2:1,0,17:22:255,255,255,0,55,1	1/1:1,20,1:22:255,35,0,255,44,255
-chr21	26698764	chr21:26698764:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:28:109,0,221	0/1:15,15:32:180,0,180	0/0:37,0:38:0,112,255
-chr21	26700305	chr21:26700305:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,26,18:44:255,255,218,255,0,255	1/2:0,27,26:53:255,255,255,255,0,255	1/2:0,37,24:61:255,255,255,255,0,255
-chr21	26706669	chr21:26706669:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<11.2>,<12.2>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:16,8,0:24:84,0,240,132,255,255	0/2:14,0,15:30:255,255,255,0,255,255	1/1:0,22,0:22:255,65,0,255,65,255
-chr21	26707896	chr21:26707896:M	GATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<11>	.	.	Motif=GATA	GT:AD:DP:PL	0/0:12,0:19:0,42,255	0/1:10,14:27:255,0,190	0/1:13,17:38:255,0,255
-chr21	26708936	chr21:26708936:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/1:8,13:21:182,0,87	1/1:1,33:34:255,83,0	0/1:9,12:21:159,0,103
-chr21	26714260	chr21:26714260:M	TTTTGTTTTGTTTTGTTTTGTTCTGTTT	<6.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:29,0:29:0,85,255	0/1:14,13:27:164,0,183
-chr21	26717745	chr21:26717745:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGT	<25.5>,<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,3,0,7:10:194,126,201,179,204,244,91,0,54,74	2/3:1,0,6,2:9:96,105,162,19,62,39,88,105,0,166	0/1:11,8,0,0:19:193,0,255,139,191,255,232,192,255,255
-chr21	26719085	chr21:26719085:M	AAAAAAAAAAAAAAAGAAAAAAAGAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:16:194,0,146	1/1:0,18:19:255,54,0	0/1:3,11:14:252,0,44
-chr21	26721320	chr21:26721320:M	AAAAAAAAAAAGAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,17,0:31:230,0,173,255,224,255	1/2:0,17,17:34:255,255,255,255,0,255	0/1:18,26,0:45:255,0,200,255,255,255
-chr21	26721683	chr21:26721683:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:21:255,63,0,255,60,255	1/2:0,6,4:11:255,106,85,166,0,147	1/2:0,12,1:17:255,27,32,255,0,255
-chr21	26722340	chr21:26722340:M	TTTCTTTTTTTTTCTTTT	<3.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,25:25:255,75,0	0/1:24,19:43:255,0,255	0/1:22,23:45:255,0,255
-chr21	26724731	chr21:26724731:M	TGTTTTTTTTTTTTTTTTGTTTTTG	<4>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/0:9,1:10:0,10,152	0/1:4,9:15:138,0,36	0/0:13,0:13:0,38,250
-chr21	26725779	chr21:26725779:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:5:3,0,55	0/1:3,4:7:46,0,30	0/1:3,1:4:6,0,40
-chr21	26727602	chr21:26727602:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,85,255	0/1:14,11:28:111,0,161	0/0:37,0:39:0,111,255
-chr21	26734714	chr21:26734714:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:33:219,0,180	1/1:4,35:40:255,47,0	0/1:15,13:29:160,0,187
-chr21	26742280	chr21:26742280:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:146,15,0	0/0:0,0:4:0,0,0	1/1:0,10:11:255,30,0
-chr21	26742481	chr21:26742481:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,10:18:128,0,85	1/1:1,4:9:73,4,0	0/1:3,6:12:95,0,21
-chr21	26746256	chr21:26746256:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,2,36:40:255,255,255,96,70,0	1/2:2,15,21:38:255,255,255,229,0,157	1/2:0,20,18:42:255,255,213,255,0,255
-chr21	26746899	chr21:26746899:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:25:199,0,255	0/1:10,9:20:189,0,215	0/0:23,0:27:0,74,255
-chr21	26762626	chr21:26762626:M	AAAAAAAAAAAAAAAAAAAA	<21>,<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,4,3:7:193,151,138,53,52,32,70,59,0,50	1/2:0,3,1,0:5:68,17,5,42,0,39,67,14,50,94	1/2:0,2,3,0:5:109,51,37,29,0,20,85,43,34,94
-chr21	26764388	chr21:26764388:M	CACACACACACACACACACACACACACACACACACAC	<14.5>,<15.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,65,255	1/2:0,10,8:19:255,137,82,179,0,127	1/2:0,12,8:20:255,141,83,210,0,154
-chr21	26765106	chr21:26765106:M	TGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<19>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,12,0:24:154,0,146,190,210,255	1/2:0,5,6:11:227,104,74,74,0,56	0/2:16,1,10:31:218,163,255,0,255,255
-chr21	26766282	chr21:26766282:M	ACACACACACACACACACACACACACACACACACACATACCCACACACATACACACACACA	<26.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,4,4:8:166,69,96,108,0,96	1/1:0,5,0:7:161,17,0,154,9,151	0/2:1,0,3:4:39,51,109,0,17,5
-chr21	26767776	chr21:26767776:M	ACACACACACACACACACACACACACACACACACACACACAC	<17>,<18>,<22>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,12,0:26:255,215,139,249,0,175,255,215,249,255	0/2:8,0,11,0:19:255,186,255,0,222,190,255,255,135,255	1/3:1,13,1,6:22:255,86,136,255,150,255,255,0,200,255
-chr21	26768757	chr21:26768757:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:33:0,78,255	0/1:12,9:21:105,0,156	0/1:13,13:26:172,0,168
-chr21	26770320	chr21:26770320:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,33:34:255,100,0	1/1:0,35:36:255,106,0
-chr21	26770853	chr21:26770853:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,2:41:0,81,255	0/1:19,25:45:255,0,201	0/0:42,2:46:0,99,255
-chr21	26772465	chr21:26772465:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:8:31,0,66	0/0:10,2:12:0,1,136	0/1:3,9:14:134,0,15
-chr21	26775179	chr21:26775179:M	TTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:26:255,77,0	0/1:14,8:27:203,0,255	0/1:25,10:38:179,0,255
-chr21	26776964	chr21:26776964:M	ACACACACACACACACACACACACACACACACA	<19.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,13,0,0:30:255,0,255,255,255,255,255,255,255,255	0/3:10,0,2,10:23:255,255,255,82,255,255,0,252,230,229	1/2:0,9,8,2:24:255,212,153,224,0,174,255,76,205,255
-chr21	26786802	chr21:26786802:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:52,2:55:0,126,255	0/1:18,15:33:178,0,233
-chr21	26813982	chr21:26813982:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:37:0,72,255	0/1:16,22:41:255,0,180	0/1:21,19:40:225,0,255
-chr21	26814938	chr21:26814938:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,11:20:133,0,89	1/1:1,14:17:215,27,0	0/0:12,1:16:0,21,188
-chr21	26815095	chr21:26815095:M	AAACAAACAAACAAACAAAACAAAAAAC	<7.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:17,11:28:220,0,255	1/1:0,24:24:255,72,0	0/1:15,12:27:251,0,255
-chr21	26816216	chr21:26816216:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTGTGTGTGTGTGTGTATGTGTGTGTCTGTGT	<36.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,5:6:59,3,0	1/1:0,3:6:43,9,0	1/1:0,2:5:40,8,0
-chr21	26816399	chr21:26816399:M	ATATATATATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,15:29:255,0,202	0/1:21,13:37:216,0,255	0/0:34,1:35:0,80,255
-chr21	26816417	chr21:26816417:M	ACACACACACACACACACACACACACACACACA	<13.5>,<14.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:2,1,7,3:15:159,93,160,23,84,67,127,84,0,233	1/2:0,12,4,0:16:255,49,2,141,0,93,255,50,141,255	2/3:3,4,4,4:15:166,24,117,25,65,81,115,8,0,199
-chr21	26824985	chr21:26824985:M	GAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAA	<5.8>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:1,2:5:39,0,20	0/1:1,4:5:75,0,10	0/0:2,0:2:0,6,47
-chr21	26829295	chr21:26829295:M	GATAGATAGAGAGATCTAGATAGATCTAGATAGATAGATAGATAGATAGATAGA	<12.5>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:12,16:28:227,0,147	1/1:0,11:11:200,32,0	0/1:9,10:19:132,0,112
-chr21	26849665	chr21:26849665:M	TTTTTTTTTTTTTTTT	<17>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,4:14:181,106,83,93,0,157	1/2:0,5,6:13:220,166,150,69,0,120	0/1:10,1,0:21:25,0,76,23,80,255
-chr21	26856469	chr21:26856469:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,21:41:255,0,249	1/1:0,30:33:255,86,0	0/1:16,15:32:178,0,206
-chr21	26863306	chr21:26863306:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,4:5:56,69,111,0,15,3	1/2:0,9,2:14:168,32,16,164,0,231	0/2:2,0,9:12:131,161,255,0,30,0
-chr21	26864743	chr21:26864743:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,18:27:249,0,75	0/1:11,11:25:141,0,120	0/1:5,11:16:149,0,42
-chr21	26868351	chr21:26868351:M	GTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,16,7:25:255,112,144,255,0,255	1/2:0,24,6:31:255,106,86,255,0,255	1/2:0,13,12:27:255,217,255,255,0,255
-chr21	26876593	chr21:26876593:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<7.5>,<20.5>,<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,0,4,0:24:12,72,255,0,255,225,35,255,255,255	1/2:1,8,9,0:24:255,138,252,190,0,178,255,95,206,255	0/3:9,1,0,5:20:84,100,255,44,185,171,0,210,161,206
-chr21	26876629	chr21:26876629:M	GCGCGCGTGCGCGCGCGCGCGC	<7>	.	.	Motif=GC	GT:AD:DP:PL	1/1:0,11:12:255,36,0	1/1:0,22:25:255,75,0	1/1:1,14:18:255,28,0
-chr21	26879466	chr21:26879466:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:4:0,12,70	1/1:0,1:3:38,8,0	0/1:1,3:4:40,0,5
-chr21	26882714	chr21:26882714:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:28:255,0,235	0/0:20,1:26:0,48,255	0/1:8,12:28:255,0,166
-chr21	26883167	chr21:26883167:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,10:26:255,177,226,209,0,255	0/1:18,14,1:33:149,0,230,224,246,255	1/2:2,18,8:29:255,110,148,255,0,255
-chr21	26885723	chr21:26885723:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:32:184,0,217	0/1:19,24:45:255,0,226	0/1:12,16:28:214,0,137
-chr21	26904803	chr21:26904803:M	AAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:13:67,0,163	0/1:7,4:13:67,0,175	0/1:6,3:10:62,0,135
-chr21	26911752	chr21:26911752:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:5,14:21:255,0,79	0/1:8,20:33:255,0,159
-chr21	26919217	chr21:26919217:M	TTTTTTATTTGTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:178,0,206	0/0:27,3:30:0,37,255	0/1:13,17:32:218,0,146
-chr21	26926668	chr21:26926668:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:21:255,60,0	0/1:8,6:16:78,0,89	0/1:8,16:26:221,0,64
-chr21	26941373	chr21:26941373:M	AACAGAAACAGA	<2.3>	.	.	Motif=AACAGA	GT:AD:DP:PL	1/1:0,37:37:255,111,0	0/1:16,34:50:255,0,255	0/1:25,23:48:255,0,255
-chr21	26945151	chr21:26945151:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,36:40:255,63,0	0/1:19,20:39:235,0,216	0/1:19,22:41:255,0,220
-chr21	26949137	chr21:26949137:M	ATATATATATATATATATCACACATATATCCATATATATATATCACACATATATATATATAT	<32>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,11:15:142,18,0	0/1:9,8:19:69,0,64	0/1:12,5:18:25,0,107
-chr21	26949200	chr21:26949200:M	GAGAGAGAGAGAGAGAGAGAGAGAG	<13.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,24:25:255,71,0	0/1:7,9:17:102,0,79	0/1:18,11:30:103,0,234
-chr21	26957430	chr21:26957430:M	ATAGATAGATGGATAGATGATAGATAGATAGATAGATAGATAGATAGATA	<11.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,20:20:255,59,0	0/1:8,8:16:98,0,97	0/1:10,4:14:34,0,146
-chr21	26980002	chr21:26980002:M	AAAAAAAAAAAAATAATAAAAAATAAAAAAAA	<34>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,11:22:255,201,139,199,0,138	1/2:1,8,9:19:255,130,105,114,0,98	1/2:0,3,15:19:255,255,215,54,0,9
-chr21	26986375	chr21:26986375:M	AAAACAAAACAAAACA	<4.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,27:30:255,74,0	0/1:14,17:32:255,0,255	0/1:19,14:36:255,0,255
-chr21	26987399	chr21:26987399:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,9:14:213,112,127,51,0,28	1/1:0,4,0:5:114,12,0,77,12,66	1/2:1,5,3:10:163,26,33,77,0,68
-chr21	26997705	chr21:26997705:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,39:39:255,115,0	1/1:0,40:40:255,118,0
-chr21	27012585	chr21:27012585:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7,1:9:111,9,0,90,9,110	1/2:0,2,3:6:108,56,41,27,0,15	1/2:1,2,2:5:56,16,18,11,0,30
-chr21	27015316	chr21:27015316:M	TTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:8,8:16:108,0,108	0/1:16,14:30:166,0,203	0/1:19,7:27:53,0,255
-chr21	27021023	chr21:27021023:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,11:28:254,0,191	0/1:16,12:28:247,0,255	0/1:16,12:32:255,0,255
-chr21	27029599	chr21:27029599:M	GTGTGTATGTGTGTGTGTGTGTGTGTG	<12.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,21:41:255,0,236	0/1:11,10:21:115,0,133	0/1:21,17:40:209,0,255
-chr21	27031040	chr21:27031040:M	CATTCATTCATTCATTC	<8.2>,<9.2>	.	.	Motif=CATT	GT:AD:DP:PL	1/2:0,20,15:35:255,255,188,255,0,255	1/2:0,16,17:33:255,255,213,255,0,195	1/1:0,29,0:29:255,87,0,255,86,255
-chr21	27032693	chr21:27032693:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:24:112,0,138	0/1:6,7:16:103,0,56	0/1:7,9:18:114,0,80
-chr21	27038060	chr21:27038060:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/0:30,1:31:0,73,255	0/1:18,13:32:150,0,229
-chr21	27038723	chr21:27038723:M	ATATATATATTATATATATATAT	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:18,16:34:214,0,247	0/1:12,7:19:73,0,162	0/1:22,8:30:64,0,255
-chr21	27041912	chr21:27041912:M	TTTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,0,10:23:121,184,255,0,220,168	0/0:32,0,0:34:0,96,255,99,255,255	0/1:18,19,0:38:255,0,255,255,255,255
-chr21	27042351	chr21:27042351:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,47,255	0/1:17,5:24:25,0,230	0/1:3,10:14:145,0,12
-chr21	27045046	chr21:27045046:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:26:0,75,255	0/1:14,4:22:60,0,255	0/1:5,14:21:255,0,76
-chr21	27046453	chr21:27046453:M	ACACACACACACACACACACACACACACACACACACATACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:10,0:12:0,33,255	0/1:13,15:29:255,0,255
-chr21	27048700	chr21:27048700:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,1,1:43:0,98,255,105,255,255	0/2:20,2,21:44:255,255,255,0,255,252	0/1:17,23,0:40:255,0,197,255,255,255
-chr21	27052291	chr21:27052291:M	TATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:25,0:26:0,76,255	0/1:17,14:31:170,0,226
-chr21	27059475	chr21:27059475:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/0:26,0:36:0,99,255	0/1:23,12:39:221,0,255
-chr21	27059489	chr21:27059489:M	TCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:21,11:36:156,0,255	0/1:28,8:39:79,0,255
-chr21	27061705	chr21:27061705:M	AAATAAATAAATAAATAAATAAATAAATAAA	<8.8>,<9.8>,<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,10,11,0:21:255,213,154,167,0,134,255,213,194,255	1/3:0,10,0,4:15:255,121,91,255,109,255,181,0,179,255	2/2:0,0,14,0:16:255,255,255,42,41,0,255,255,33,255
-chr21	27068129	chr21:27068129:M	CTAAAACTAAAA	<2.3>	.	.	Motif=CTAAAA	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:19,17:36:255,0,255	0/1:20,18:38:255,0,255
-chr21	27069922	chr21:27069922:M	AAGAGAAAGAGAAGGAGAA	<2.7>	.	.	Motif=AAGAGA	GT:AD:DP:PL	0/0:36,0:36:0,108,255	0/0:37,0:37:0,111,255	0/1:15,20:35:255,0,255
-chr21	27070430	chr21:27070430:M	AAAAAAAAAAAAAGAAAAGAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1,0:44:0,110,255,128,255,255	0/1:21,14,0:37:135,0,255,204,255,255	0/2:16,2,9:28:190,136,255,0,251,255
-chr21	27070466	chr21:27070466:M	AAAAAAAAAATAAGAAAAAAATAAAAAAATAAAAAATAAAAA	<43>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:9,10:20:121,0,108	0/0:25,0:25:0,74,255
-chr21	27070523	chr21:27070523:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,1:41:0,102,255	0/1:19,12:34:125,0,255	0/0:46,2:51:0,113,255
-chr21	27072946	chr21:27072946:M	TTTTTTTTTCTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:36,1:37:0,91,255	0/1:12,17:30:232,0,131
-chr21	27079287	chr21:27079287:M	TCTCGCTCTCTCTCCCTCTCTCTCTTTCTCTGTCTCTC	<20>	.	.	Motif=TC	GT:AD:DP:PL	0/0:15,2:17:0,22,170	0/1:10,12:22:92,0,66	0/0:24,4:28:0,26,255
-chr21	27084962	chr21:27084962:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:11,7:18:67,0,134	0/1:6,6:12:70,0,69
-chr21	27085793	chr21:27085793:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/1:17,13:31:147,0,208	0/0:30,1:32:0,75,255
-chr21	27086775	chr21:27086775:M	AAAAAACAAAACAAACAAACAAACAAACAAAAAAAAAA	<33>,<37>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,12:21:165,223,255,0,167,108	1/2:0,7,14:21:255,245,255,177,0,136	0/2:17,0,16:34:194,255,255,0,255,223
-chr21	27103259	chr21:27103259:M	TATATATATATATATATATATATATAT	<10.5>,<12.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:2,0,33,0:37:255,255,255,73,105,0,255,255,110,255	1/2:0,12,8,0:21:255,131,169,255,0,255,255,214,255,255	2/3:1,0,9,6:18:255,255,255,145,175,144,143,252,0,249
-chr21	27107708	chr21:27107708:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,39:40:255,99,0	0/1:21,17:38:191,0,255	0/1:14,23:38:255,0,147
-chr21	27116215	chr21:27116215:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:151,26,0	1/1:0,3:4:52,9,0	0/1:4,1:5:3,0,55
-chr21	27134124	chr21:27134124:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<17.5>,<18.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:20,0,0:22:0,63,255,66,255,255	0/1:19,19,0:39:255,0,255,255,255,255	0/2:17,1,15:34:255,245,255,0,255,255
-chr21	27136797	chr21:27136797:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/0:26,0:27:0,79,255	0/1:12,17:29:221,0,130
-chr21	27139200	chr21:27139200:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/1:18,8:26:146,0,255	0/0:27,0:28:0,84,255
-chr21	27143123	chr21:27143123:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:36:0,87,255	0/1:19,15:35:168,0,227	0/1:14,10:25:115,0,178
-chr21	27148034	chr21:27148034:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<14.5>,<22>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,10,0:11:255,33,0,255,33,255	1/2:0,19,10:32:255,255,229,255,0,255	1/2:0,14,0:18:255,47,5,255,0,255
-chr21	27149732	chr21:27149732:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47,0:47:255,138,0,255,141,255	1/2:2,21,22:45:255,255,255,255,0,255	0/1:16,26,2:46:255,0,161,255,195,255
-chr21	27151654	chr21:27151654:M	ACACACACACACACACATACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,26:26:255,77,0	0/1:19,21:40:255,0,226	0/1:15,30:45:255,0,148
-chr21	27153416	chr21:27153416:M	AGAGAGAGAGAGAGAGAGATAGAG	<13>,<16>	.	.	Motif=AG	GT:AD:DP:PL	2/2:0,0,33:36:255,255,255,107,107,0	1/2:0,12,5:17:255,129,93,212,0,255	0/2:14,0,8:23:181,222,255,0,255,255
-chr21	27155237	chr21:27155237:M	AAAACCAAACCAAAACAAACAAGAAAGAACAAAACAA	<8.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,24:24:255,72,0	0/1:7,12:19:249,0,125
-chr21	27158953	chr21:27158953:M	AAAAAAAAAAAAAGAAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:25:0,63,255	0/0:15,0:17:0,47,255	0/1:7,12:21:255,0,113
-chr21	27159918	chr21:27159918:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:37:0,100,255	0/1:12,11:25:218,0,255	0/0:33,0:34:0,101,255
-chr21	27162693	chr21:27162693:M	TTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:34:0,98,255	0/1:14,5:19:87,0,255	0/0:46,0:53:0,156,255
-chr21	27167102	chr21:27167102:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,20,112	0/1:5,6:13:80,0,45	0/0:8,1:9:0,9,118
-chr21	27167875	chr21:27167875:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:45:0,114,255	0/1:23,22:47:229,0,255	0/1:21,29:50:255,0,211
-chr21	27170090	chr21:27170090:M	GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTG	<17.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:31,0,0:31:0,93,255,92,255,255	0/1:12,15,0:27:255,0,255,255,210,255	0/2:18,0,24:42:255,255,255,0,255,210
-chr21	27171002	chr21:27171002:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:5:6,0,34	0/1:1,3:5:47,0,2	0/0:1,0:1:0,3,17
-chr21	27172720	chr21:27172720:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4,2:10:39,0,61,34,23,122	0/2:2,0,2:6:38,51,97,0,27,16	0/2:3,0,5:8:60,82,167,0,42,27
-chr21	27174600	chr21:27174600:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:21:0,54,255	0/0:15,0:15:0,45,255	0/1:15,7:24:130,0,255
-chr21	27177682	chr21:27177682:M	TTACTTACTTAC	<2>	.	.	Motif=TTAC	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:24,28:52:255,0,255	0/1:20,29:49:255,0,232
-chr21	27179550	chr21:27179550:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,1:8:3,0,159	0/0:15,0:15:0,45,255	0/1:7,7:17:151,0,146
-chr21	27182356	chr21:27182356:M	ATCTATCTATCTATCTATCTATCTATCTAT	<5.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:4,6:13:137,0,69	0/0:26,0:26:0,78,255
-chr21	27186560	chr21:27186560:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1,1:4:18,0,59,8,17,34	0/1:3,4,0:11:121,0,66,102,49,141	0/2:2,0,6:8:79,101,200,0,34,11
-chr21	27186863	chr21:27186863:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGT	<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,7:7:118,137,202,20,21,0	1/2:0,6,1:10:110,15,1,114,0,168	1/2:2,4,4:11:76,37,89,38,0,90
-chr21	27188142	chr21:27188142:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/1:13,7:21:58,0,171	0/0:32,2:38:0,47,255
-chr21	27193593	chr21:27193593:M	GAGAGAGAGAGAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,28:29:255,87,0	1/1:0,28:28:255,84,0
-chr21	27194368	chr21:27194368:M	AAAAAAAAAAAAAAGCAAAAAACAAAAGAACAAAAAACAAAACAAACAAAAAAAA	<60>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:72,9,0	1/1:0,2:4:79,11,0	1/1:0,4:5:128,15,0
-chr21	27198459	chr21:27198459:M	TTCTTTCTTTATTCTTTTTTTCTT	<6.8>	.	.	Motif=TTCT	GT:AD:DP:PL	1/1:0,6:6:252,18,0	1/1:0,11:11:255,33,0	1/1:0,13:13:255,39,0
-chr21	27198602	chr21:27198602:M	ATTATTATTATTATTATT	<6.3>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:27,15:44:0,6,59	0/1:22,18:46:6,0,43	0/0:41,0:45:0,76,202
-chr21	27198618	chr21:27198618:M	TTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,14:42:255,0,255	0/1:19,14:36:255,0,255	0/0:39,0:41:0,118,255
-chr21	27223734	chr21:27223734:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:47:0,119,255	0/0:33,0:35:0,102,255	0/1:19,16:37:185,0,238
-chr21	27228563	chr21:27228563:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,33:34:255,99,0	1/1:0,36:36:255,106,0
-chr21	27233281	chr21:27233281:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<17>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/0:28,0:29:0,85,255	0/1:13,15:28:189,0,152
-chr21	27238205	chr21:27238205:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:32,0:33:0,98,255	0/0:46,0:46:0,135,255	0/1:19,25:44:255,0,227
-chr21	27249823	chr21:27249823:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:10,12:23:141,0,108	0/0:20,0:22:0,64,255
-chr21	27259481	chr21:27259481:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:34:130,0,255	0/0:16,0:18:0,52,255	0/0:24,0:25:0,73,255
-chr21	27260895	chr21:27260895:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<11.8>,<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,10,15:25:255,255,212,162,0,117	1/1:0,7,0:7:126,21,0,126,21,126	2/2:0,0,18:18:255,255,255,54,53,0
-chr21	27277660	chr21:27277660:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,19:23:255,58,0	1/1:0,24:28:255,82,0
-chr21	27278342	chr21:27278342:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,30:32:255,57,0	1/1:1,25:26:255,59,0	1/1:1,25:26:255,58,0
-chr21	27279983	chr21:27279983:M	TTTTTAATTTTTATTTTATTATTATTATTATTATTATTATTATTATTATTATTATT	<6.3>,<6.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	1/1:0,26,0:28:255,78,0,255,70,255	1/1:0,13,0:14:255,39,0,185,35,149	1/2:0,11,10:24:255,119,56,132,0,70
-chr21	27283284	chr21:27283284:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:10:217,3,0	1/1:0,5:6:133,15,0	1/1:0,5:6:134,15,0
-chr21	27289363	chr21:27289363:M	ATATATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:0,44:44:255,130,0	1/1:0,42:43:255,126,0
-chr21	27291239	chr21:27291239:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,21:36:255,0,169	0/0:19,3:23:0,15,255	0/1:15,14:30:174,0,180
-chr21	27297370	chr21:27297370:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,5:22:255,80,29,255,0,253	1/1:0,30,2:34:255,96,0,255,64,255	1/2:1,11,12:24:255,166,157,180,0,130
-chr21	27298892	chr21:27298892:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:11:87,0,12	0/1:4,9:15:111,0,30	0/1:2,2:4:21,0,21
-chr21	27300538	chr21:27300538:M	TTTTTTATTTTTATTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,25:47:255,0,255	1/1:0,30:30:255,88,0	0/1:16,26:42:255,0,176
-chr21	27303089	chr21:27303089:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:31:174,0,220	0/0:33,0:34:0,100,255	0/1:20,27:47:255,0,229
-chr21	27312623	chr21:27312623:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:38,0,16	1/1:0,2:3:46,9,0	0/1:0,1:5:8,0,18
-chr21	27321410	chr21:27321410:M	TATCTATCATCTATCTTATCTATCTATCTATCTATCTATCTATCATCTATCTATCCACCTACCTATCTATC	<19.8>,<20.8>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,0,6:6:174,131,116,18,18,0	1/1:0,4,0:4:115,12,0,83,12,73	2/2:0,0,2:2:58,43,38,6,6,0
-chr21	27321658	chr21:27321658:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,37:38:255,111,0	1/1:0,40:40:255,120,0
-chr21	27322683	chr21:27322683:M	TGTGTGTGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,26:26:255,78,0	1/1:0,33:35:255,105,0
-chr21	27329320	chr21:27329320:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,49:49:255,144,0	1/1:0,41:41:255,121,0
-chr21	27330242	chr21:27330242:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:109,12,0	.	1/1:0,1:1:42,3,0
-chr21	27333318	chr21:27333318:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,30:53:255,255,255,255,0,255	1/1:0,31,1:32:255,94,0,255,76,255	1/2:0,26,21:47:255,255,252,255,0,255
-chr21	27335847	chr21:27335847:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:10:81,0,18	0/0:10,0:11:0,32,180	0/1:2,7:9:96,0,9
-chr21	27337467	chr21:27337467:M	TATATATATATATATATATATATA	<8>,<9>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,18,9:28:255,168,86,255,0,255	2/2:0,3,21:24:255,255,255,72,17,0	1/2:0,13,17:30:255,255,222,236,0,149
-chr21	27338345	chr21:27338345:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	.	1/2:0,2,3:5:139,47,33,32,0,17	1/1:0,3,0:5:114,15,0,82,14,72
-chr21	27348281	chr21:27348281:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:229,43,0	0/1:8,9:22:117,0,60	1/1:0,18:19:255,52,0
-chr21	27357584	chr21:27357584:M	AAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,108,0	0/1:22,22:46:255,0,255	1/1:0,32:33:255,99,0
-chr21	27364791	chr21:27364791:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:32:255,48,0	0/1:18,21:41:255,0,207	1/1:1,38:40:255,99,0
-chr21	27365015	chr21:27365015:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14,3:19:255,55,0,255,3,215	0/1:7,10,0:20:230,0,173,160,182,255	1/2:0,10,7:20:255,119,65,188,0,139
-chr21	27368218	chr21:27368218:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:86,9,0	0/1:1,0:5:5,0,32	1/1:0,4:5:128,15,0
-chr21	27369620	chr21:27369620:M	TTTTATTTTTATTTTATTTTATTTTATTTTATTTATTTTATTTTATTTTATTTTAT	<12.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,9:9:173,27,0	0/1:5,2:7:16,0,70	1/1:0,12:12:225,35,0
-chr21	27380980	chr21:27380980:M	TGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,28:35:255,92,0	0/1:16,7:24:134,0,255	1/1:0,27:32:255,95,0
-chr21	27380998	chr21:27380998:M	TATATATATATATATATATA	<12>	.	.	Motif=TA	GT:AD:DP:PL	0/0:24,0:27:0,80,255	0/0:20,0:21:0,63,255	0/1:18,12:33:177,0,255
-chr21	27384274	chr21:27384274:M	AAATAAAATAAAAT	<1.8>	.	.	Motif=AAATA	GT:AD:DP:PL	1/1:0,45:45:255,133,0	0/1:17,19:36:239,0,203	0/1:23,26:49:255,0,255
-chr21	27385910	chr21:27385910:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:44,8,0	0/1:2,1:3:8,0,24	1/1:0,9:9:153,26,0
-chr21	27388054	chr21:27388054:M	TATATATAGTATATAGTATATATAGTTATATAGTATTATTATATA	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:36,4:40:3,0,255	0/1:6,4:10:92,0,125	0/1:23,8:31:151,0,255
-chr21	27389584	chr21:27389584:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:83,0,102	0/1:5,2:8:11,0,73	1/1:0,12:13:222,38,0
-chr21	27393482	chr21:27393482:M	AAAAACAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAGAAGAAAAAGAAAAAAAAA	<76>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:49,9,0	1/1:0,1:2:16,3,0	0/0:2,0:2:0,6,32
-chr21	27400982	chr21:27400982:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,3,12	1/1:0,5:7:184,21,0	1/1:0,0:2:9,1,0
-chr21	27404660	chr21:27404660:M	ATACATACACACACACATACATAC	<5.5>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:47,0:47:0,141,255	0/1:16,17:33:255,0,255	0/1:26,19:45:255,0,255
-chr21	27405018	chr21:27405018:M	ACACACACACACACACACACACACACAC	<13>,<15>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,20,13,0:34:255,217,255,255,0,255,255,255,255,255	1/3:0,19,0,12:34:255,255,255,255,255,255,255,0,255,255	2/3:2,0,16,3:21:255,255,255,50,79,31,233,255,0,255
-chr21	27407722	chr21:27407722:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,28:29:255,84,0	1/1:1,30:31:255,67,0
-chr21	27407829	chr21:27407829:M	TATATATTATATAAAATATGTATATATAAATAATATATATTATACATAATATTATA	<29>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,11:11:215,33,0	1/1:0,3:3:55,9,0	1/1:0,12:12:228,35,0
-chr21	27411879	chr21:27411879:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,3:6:124,17,0	1/1:0,2:2:57,6,0
-chr21	27412866	chr21:27412866:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,102,0	0/1:18,14:35:255,0,255	0/1:21,23:46:255,0,255
-chr21	27419850	chr21:27419850:M	AAATAAATAAATAAATAAATAAATAAATAA	<6.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,39:40:255,118,0	1/1:0,35:35:255,103,0	1/1:0,33:33:255,97,0
-chr21	27421161	chr21:27421161:M	TTTTTTTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,18:20:255,41,0	0/1:2,7:10:92,0,22	0/1:2,7:9:99,0,9
-chr21	27421335	chr21:27421335:M	TTTTCTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,12:21:255,226,255,145,0,170	1/2:3,15,9:29:255,117,186,224,0,255	2/2:2,0,19:21:255,255,255,26,57,0
-chr21	27424968	chr21:27424968:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:120,0,150	0/1:3,9:13:209,0,44	0/1:2,5:10:124,0,34
-chr21	27425068	chr21:27425068:M	TTGTTATTGTTGTTGTTCGTTG	<8.3>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,21:22:255,55,0	0/1:16,15:32:174,0,194	1/1:0,24:25:255,73,0
-chr21	27425091	chr21:27425091:M	TTTCTTTCTTTCCTCTTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCTTTCTT	<4.2>,<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/2:6,0,8:14:55,73,208,0,135,113	0/0:12,0,2:15:0,36,255,18,255,255	0/1:5,8,4:22:161,0,88,140,76,241
-chr21	27425193	chr21:27425193:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTCTTTTCTTTTCTTT	<33.8>	.	.	Motif=CTTT	GT:AD:DP:PL	1/1:0,8:8:95,22,0	1/1:0,2:7:23,5,0	1/1:0,4:7:47,11,0
-chr21	27426776	chr21:27426776:M	GTGTGTGTGTGTGTGTGTGTGT	<12>,<14>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,19,0:36:255,0,218,255,255,255	0/2:24,0,24:50:255,255,255,0,255,255	0/1:22,14,0:36:154,0,255,255,255,255
-chr21	27429363	chr21:27429363:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,9:25:109,0,142	0/1:15,24:44:255,0,111	1/1:1,35:43:255,107,0
-chr21	27431644	chr21:27431644:M	AAAAAAAAAAAAAAAAA	<11>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,7:23:62,129,255,0,255,220	1/2:3,23,5:31:255,35,94,255,0,255	0/0:24,0,1:27:0,80,255,61,255,255
-chr21	27431810	chr21:27431810:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:12:1,0,134	0/0:28,1:29:0,68,255	0/1:7,8:16:103,0,77
-chr21	27444341	chr21:27444341:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:21:104,0,150	0/0:16,0:16:0,47,255	1/1:2,15:17:234,14,0
-chr21	27445915	chr21:27445915:M	TAGATGGATACATAGGTAGACACATAGATAGATACATAGATA	<11.5>,<12.5>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:1,13,2:16:228,29,0,183,12,200	1/1:1,17,0:18:255,36,0,255,52,255	2/2:0,0,15:15:255,255,255,45,44,0
-chr21	27447655	chr21:27447655:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,22,9,0:35:255,255,196,255,0,255,255,174,255,255	2/3:0,0,5,6:11:255,255,255,100,100,68,83,83,0,51	1/3:0,12,0,5:17:255,135,99,255,85,255,255,0,255,255
-chr21	27451701	chr21:27451701:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,29:33:255,57,0	1/1:0,33:34:255,97,0	1/1:2,33:37:255,72,0
-chr21	27457671	chr21:27457671:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1,0:20:0,40,255,59,255,255	0/1:19,22,0:41:255,0,216,255,255,255	0/2:22,0,13:36:142,241,255,0,255,255
-chr21	27459419	chr21:27459419:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:34:255,82,0	0/1:13,20:35:255,0,122	1/1:2,37:41:255,84,0
-chr21	27462244	chr21:27462244:M	ACACACACACACACACACACAC	<10.5>,<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:3,0,24:30:255,255,255,0,41,1	0/2:15,0,11:27:225,255,255,0,181,255	1/2:1,27,13:44:255,255,255,255,0,255
-chr21	27463499	chr21:27463499:M	ACACACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:19:255,54,0	0/1:18,22:40:255,0,255	0/1:19,16:36:255,0,255
-chr21	27465654	chr21:27465654:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:24:0,69,255	0/0:17,0:19:0,54,255	0/1:13,8:25:148,0,255
-chr21	27466676	chr21:27466676:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,48:48:255,142,0	0/1:26,29:55:255,0,255	1/1:0,49:49:255,144,0
-chr21	27471190	chr21:27471190:M	AAAAAAAATACAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5,0:16:47,0,163,81,207,255	0/1:10,12,0:22:150,0,115,180,177,255	0/2:7,0,7:14:157,127,218,0,127,160
-chr21	27473868	chr21:27473868:M	CACACAGACACACACACACACACACACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:27,0:27:0,79,255	0/1:14,15:31:187,0,187
-chr21	27480671	chr21:27480671:M	ACACCACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39:40:255,109,0	0/1:8,15:23:192,0,71	0/1:16,16:33:191,0,192
-chr21	27486540	chr21:27486540:M	ATATACATACATATATATATGTATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/0:27,0:27:0,81,255	0/1:8,15:24:255,0,151
-chr21	27488619	chr21:27488619:M	TTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,2:7:176,34,14,85,0,66	0/2:4,0,3:8:63,49,148,0,110,104	1/1:0,3,0:3:83,9,0,59,9,51
-chr21	27492969	chr21:27492969:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/0:31,0:31:0,93,255	0/1:15,7:23:136,0,255
-chr21	27496900	chr21:27496900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,10:21:110,0,127	0/0:12,0:12:0,35,197	0/1:9,9:19:104,0,97
-chr21	27501207	chr21:27501207:M	TTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:21:47,0,255	0/1:15,5:20:59,0,255	0/1:20,6:28:84,0,255
-chr21	27501555	chr21:27501555:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,38:40:255,81,0	1/1:0,38:39:255,114,0	0/1:26,14:40:138,0,255
-chr21	27503971	chr21:27503971:M	ACACACACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:2,10,4,0:16:255,34,97,234,0,255,255,126,255,255	2/3:0,0,9,4:13:232,255,255,105,106,75,147,237,0,218	1/2:2,12,7,0:22:255,85,170,255,0,255,255,204,255,255
-chr21	27509416	chr21:27509416:M	ACACACACACACACACACACACACACACACACACACAC	<18>,<21>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,11:25:255,255,255,250,0,255	1/1:1,20,0:24:255,30,0,255,48,255	0/2:11,0,9:21:199,238,255,0,193,252
-chr21	27514789	chr21:27514789:M	ACACACACACACACACATACACAC	<11>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,19:38:255,0,254	0/0:37,2:39:0,78,255	0/1:21,25:46:255,0,255
-chr21	27522644	chr21:27522644:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7:8:215,22,0	.	1/1:0,0:3:4,2,0
-chr21	27523022	chr21:27523022:M	AATAATAATAATAATAATAATA	<8.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:20,13:33:154,0,255	0/1:17,12:30:130,0,230	0/0:22,0:23:0,67,255
-chr21	27529516	chr21:27529516:M	TTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:170,21,0	0/1:3,11:14:255,0,39	.
-chr21	27531879	chr21:27531879:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:4:0,9,70	0/1:3,1:7:37,0,51	0/1:3,3:7:53,0,51
-chr21	27540985	chr21:27540985:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,110,0	1/1:0,47:47:255,138,0	0/1:25,17:42:196,0,255
-chr21	27541214	chr21:27541214:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:41,0,6	0/1:6,3:9:24,0,75	0/1:6,2:9:9,0,88
-chr21	27552656	chr21:27552656:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:1,25:27:255,61,0	0/1:20,13:34:135,0,255
-chr21	27558016	chr21:27558016:M	ACACACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,5:25:33,0,255	0/1:11,16:27:208,0,116	0/0:31,1:33:0,66,255
-chr21	27559114	chr21:27559114:M	TTTTATTCTATTTTATTTTATTTTATTTTATTTTAT	<4.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:16,27:43:255,0,255	0/0:33,0:33:0,99,255	0/1:8,22:30:255,0,131
-chr21	27561187	chr21:27561187:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:9:9,0,97	0/1:6,3:11:31,0,73	0/0:19,1:22:0,46,255
-chr21	27567038	chr21:27567038:M	ATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:51,1:52:0,135,255	0/1:14,10:24:109,0,181	0/0:35,2:37:0,72,255
-chr21	27587785	chr21:27587785:M	TATATATATTATATTATGTGACATATATTTTATATATATTATATATATATA	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:19,4:24:53,0,255	0/1:4,1:5:10,0,84	0/1:5,3:8:52,0,100
-chr21	27590230	chr21:27590230:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:37:255,0,163	1/1:4,37:42:255,52,0	0/1:13,17:30:224,0,150
-chr21	27594389	chr21:27594389:M	TGGTTGGTTGGTTGGTTG	<5.5>	.	.	Motif=TGGT	GT:AD:DP:PL	0/1:23,12:35:130,0,255	1/1:0,47:47:255,138,0	0/0:39,0:39:0,115,255
-chr21	27606894	chr21:27606894:M	TTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTTGT	<16>,<17.7>,<19.3>	.	.	Motif=TTG	GT:AD:DP:PL	1/3:0,11,0,9:20:255,250,217,255,250,255,255,0,255,255	1/1:0,17,0,0:17:255,51,0,255,51,255,255,51,255,255	2/3:0,0,8,10:18:255,255,255,255,255,253,225,225,0,195
-chr21	27607235	chr21:27607235:M	TCTTTTTCTTTTTTTTTT	<3.2>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/1:23,17:40:230,0,255	1/1:2,44:46:255,96,0	0/0:35,0:35:0,104,255
-chr21	27608798	chr21:27608798:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,9,0,10:19:255,255,241,255,182,255,242,0,163,209	2/3:0,2,12,11:25:255,255,255,193,157,121,226,143,0,158	1/1:0,20,0,0:23:255,65,0,255,65,255,255,66,255,255
-chr21	27610328	chr21:27610328:M	TTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,6:22:255,158,110,255,0,255	1/2:0,2,10:16:255,255,255,58,0,17	1/1:1,24,0:32:255,48,0,255,89,255
-chr21	27627474	chr21:27627474:M	ATATATATATCTTTATATATATATATATATATAT	<16>,<23>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,4:15:245,101,69,169,0,255	1/1:0,3,0:3:49,9,0,57,9,86	1/2:0,5,3:8:146,77,62,83,0,149
-chr21	27628596	chr21:27628596:M	TATACATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,17,16:34:255,255,213,255,0,232	1/2:0,10,21:31:255,255,255,181,0,90	1/2:0,12,17:29:255,255,236,224,0,140
-chr21	27629606	chr21:27629606:M	AAAATAAATAAATAAATAAATAATAAAAATAAGAATAAAAATAAAAAT	<8.7>	.	.	Motif=AAAATA	GT:AD:DP:PL	0/1:12,5:17:122,0,255	0/1:4,7:11:209,0,70	0/1:13,9:22:242,0,255
-chr21	27647985	chr21:27647985:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<6.8>,<8.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,10,15:25:255,255,255,255,0,255	1/2:0,14,17:32:255,255,255,255,0,255	1/2:0,24,14:38:255,255,255,255,0,255
-chr21	27655297	chr21:27655297:M	TTCTTTTTTCTTTTTTCTTTTCTTTTCTTCTTCTTTTTTTTTTTT	<8>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:9,8:17:103,0,122	0/1:9,11:20:138,0,103	0/1:12,13:25:168,0,150
-chr21	27663587	chr21:27663587:M	AAACAAACAAAC	<3.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:37,13:52:206,0,255	0/1:22,25:49:255,0,255	0/1:15,18:33:255,0,255
-chr21	27665678	chr21:27665678:M	TTTTTTTTTTTATTTTGTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:152,0,170	0/1:20,16:36:178,0,248	0/1:19,16:36:188,0,252
-chr21	27676113	chr21:27676113:M	AAAAAAAAAAATAAAATAAAATAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,21:32:255,0,85	0/1:5,14:21:197,0,37	0/1:7,13:20:180,0,69
-chr21	27688423	chr21:27688423:M	TCTCCCTCTCTCTCTCTCTCTCT	<10.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,14:30:180,0,218	0/1:18,10:28:98,0,242	0/1:17,10:27:107,0,238
-chr21	27694000	chr21:27694000:M	AAAATAAAAATAAA	<2.5>	.	.	Motif=AAAATA	GT:AD:DP:PL	0/1:18,16:34:255,0,255	0/0:38,0:38:0,114,255	0/1:27,25:52:255,0,255
-chr21	27695616	chr21:27695616:M	TCTCTTTCTCTT	<1.3>	.	.	Motif=TCTCTT	GT:AD:DP:PL	0/1:15,21:36:255,0,255	0/1:13,19:32:255,0,255	0/1:9,17:27:255,0,174
-chr21	27714523	chr21:27714523:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,7:24:6,0,101	0/0:9,1:10:0,16,75	0/0:15,1:17:0,34,142
-chr21	27714551	chr21:27714551:M	TATATATATATATATATATA	<11>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:2,19,8:29:255,67,12,143,0,156	1/2:3,11,7:21:181,44,21,62,0,96	1/2:1,14,7:22:235,67,19,110,0,107
-chr21	27714655	chr21:27714655:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,13:16:255,39,0	1/1:0,17:20:255,51,0	1/1:0,16:21:255,19,0
-chr21	27741987	chr21:27741987:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,28:30:255,70,0	1/1:1,33:34:255,82,0
-chr21	27761385	chr21:27761385:M	AAAGAAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<16.8>,<20.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/2:0,9,3:13:255,75,48,235,0,229	2/2:0,0,5:5:140,142,144,15,15,0	1/2:0,8,1:9:231,25,1,209,0,209
-chr21	27769825	chr21:27769825:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,10:12:255,210,183,33,32,0	1/2:0,4,10:14:255,163,123,66,0,25	1/2:0,2,8:10:255,134,106,34,0,4
-chr21	27772078	chr21:27772078:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:40:255,112,0	1/1:0,33:33:255,97,0	1/1:0,31:32:255,91,0
-chr21	27781493	chr21:27781493:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,20:45:246,0,255	0/1:30,20:50:209,0,255	0/0:40,1:41:0,102,255
-chr21	27782690	chr21:27782690:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,23:47:255,255,255,255,0,255	2/2:0,2,34:40:255,255,255,113,81,0	1/2:1,25,16:44:255,255,186,255,0,255
-chr21	27784992	chr21:27784992:M	ACACACACACACACACACACACACACACACACACAAACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,20:22:255,64,0	0/1:14,13:29:157,0,156	1/1:0,29:30:255,88,0
-chr21	27786346	chr21:27786346:M	TGTGTGCGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,28:28:255,82,0	1/1:0,43:43:255,127,0
-chr21	27793653	chr21:27793653:M	TATATATATATATATATATATATATATATATAT	<12.5>,<13.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,13,12:26:255,255,255,215,224,152,230,197,0,158	1/2:0,4,2,0:7:179,34,14,79,0,61,154,29,78,145	1/3:0,8,0,7:16:255,187,173,255,130,228,214,0,138,188
-chr21	27797322	chr21:27797322:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>,<21.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,11,0:20:255,192,134,158,0,99,255,191,158,255	1/3:0,9,0,5:15:255,149,121,255,133,251,255,0,147,237	2/3:0,0,8,6:14:255,255,255,160,159,132,211,135,0,189
-chr21	27801363	chr21:27801363:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/0:37,0:37:0,108,255	0/1:12,13:26:159,0,141
-chr21	27804074	chr21:27804074:M	TTATTTATTTATTTATTTATTTATTTATTTATTTA	<7.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:11,23:34:255,0,112	0/1:16,18:34:227,0,191	0/0:30,0:30:0,89,255
-chr21	27804852	chr21:27804852:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,34:34:255,100,0	1/1:0,39:40:255,118,0
-chr21	27810529	chr21:27810529:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,21,0:22:255,64,0,255,64,255	0/1:9,11,0:21:255,0,185,255,229,255	1/2:0,5,6:12:255,162,147,127,0,111
-chr21	27811041	chr21:27811041:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:11,14:25:170,0,118	0/0:37,3:41:0,67,255
-chr21	27811592	chr21:27811592:M	CACACACACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/0:43,0:44:0,130,255	0/1:19,30:50:255,0,214	0/1:18,21:39:255,0,222
-chr21	27815912	chr21:27815912:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:29:0,83,255	0/1:16,12:29:121,0,199	0/0:35,0:37:0,108,255
-chr21	27817799	chr21:27817799:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19,3:22:255,57,0,255,10,255	1/2:0,8,9:17:255,130,106,137,0,89	1/1:0,27,1:29:255,84,0,255,67,255
-chr21	27820032	chr21:27820032:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTACTTACTTATTT	<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:0,10:13:204,35,0	1/1:0,14:14:255,41,0
-chr21	27824230	chr21:27824230:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:12:208,35,0	1/1:0,11:13:210,38,0	1/1:0,15:15:255,44,0
-chr21	27827116	chr21:27827116:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:31:0,90,255	0/0:20,0:22:0,65,255	0/1:16,13:32:255,0,255
-chr21	27829055	chr21:27829055:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,72,255	0/0:30,0:33:0,95,255	0/1:18,7:27:107,0,255
-chr21	27836791	chr21:27836791:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,30	0/1:1,1:5:43,0,18	1/1:0,4:4:116,12,0
-chr21	27837650	chr21:27837650:M	AAAAAAAAAAAAAGAAAAGAAAAGAAAACAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:21,0,133	0/1:9,10:20:117,0,110	1/1:1,20:21:255,44,0
-chr21	27849622	chr21:27849622:M	TTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,15,128	0/0:9,0:12:0,33,255	1/1:0,18:20:255,28,0
-chr21	27851002	chr21:27851002:M	TTTTTTTTTTTTT	<11>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:21,1,14:37:172,212,255,0,255,255	0/2:18,3,22:43:255,255,255,0,255,196	1/2:0,21,26:47:255,255,255,255,0,255
-chr21	27854747	chr21:27854747:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,2:24:0,24,255	0/1:19,4:24:0,0,255	0/1:13,14:29:185,0,151
-chr21	27859465	chr21:27859465:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:6:55,0,0	0/1:1,0:3:13,0,8	0/0:6,0:6:0,18,101
-chr21	27863795	chr21:27863795:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,22:44:255,0,255	0/1:20,29:49:255,0,213	0/1:23,23:46:255,0,255
-chr21	27866101	chr21:27866101:M	CACACACACATGCACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,32:32:255,94,0	1/1:0,37:37:255,109,0
-chr21	27873205	chr21:27873205:M	CCCCCCCCCCC	<10>,<12>	.	.	Motif=C	GT:AD:DP:PL	0/1:12,13,0:25:167,0,149,237,188,255	0/1:18,13,0:31:137,0,224,224,255,255	0/2:10,1,11:22:133,176,255,0,134,127
-chr21	27879186	chr21:27879186:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/0:38,0:38:0,114,255	0/1:20,22:43:255,0,255
-chr21	27881675	chr21:27881675:M	TTTTTTTTTTTTCTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,14,0:31:174,0,231,255,255,255	0/0:22,0,0:22:0,65,255,65,255,255	1/2:0,13,17:30:255,255,255,235,0,255
-chr21	27888391	chr21:27888391:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:18:47,0,255	0/1:10,1:15:32,0,254	0/1:9,7:18:173,0,215
-chr21	27894287	chr21:27894287:M	GTGTGTGTGTGTGTGTGTGT	<12>,<13>	.	.	Motif=GT	GT:AD:DP:PL	0/1:21,14,1:36:255,0,255,241,255,255	0/2:13,1,13:27:255,211,255,0,255,255	1/2:0,22,15:37:255,255,167,255,0,255
-chr21	27902942	chr21:27902942:M	AAAAAAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5,0:9:159,0,52,146,66,199	0/1:1,3,0:7:75,0,61,60,37,98	1/2:1,3,3:9:137,43,80,36,0,57
-chr21	27903765	chr21:27903765:M	ATATATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,18:39:225,0,141	0/1:15,22:39:245,0,116	1/1:0,45:45:255,130,0
-chr21	27904539	chr21:27904539:M	GAGGGAGGGAGGGA	<4.5>	.	.	Motif=GAGG	GT:AD:DP:PL	0/1:23,16:39:78,0,159	0/0:20,6:26:0,2,158	0/1:35,16:51:45,0,255
-chr21	27908706	chr21:27908706:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:122,21,0	0/1:4,7:14:92,0,33	0/0:0,0:2:0,0,1
-chr21	27910087	chr21:27910087:M	TAGTAGTAGTAGTAGTA	<6.7>	.	.	Motif=TAG	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:37,0:37:0,109,255	0/1:25,13:38:134,0,255
-chr21	27911651	chr21:27911651:M	AAAAAAACAAAAAACAAAACAAAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:31,0:33:0,96,255	0/1:21,9:30:76,0,255
-chr21	27920809	chr21:27920809:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,3,30	0/1:1,0:2:10,0,21	0/1:5,3:10:55,0,132
-chr21	27932757	chr21:27932757:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2,0:4:48,0,20,35,17,44	1/1:0,3,0:5:98,12,0,72,12,63	1/2:0,2,6:9:147,85,76,44,0,20
-chr21	27940508	chr21:27940508:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,3:7:68,0,78	1/1:0,9:11:255,32,0	0/0:16,0:17:0,51,255
-chr21	27943150	chr21:27943150:M	ATTATTATTATTATTATT	<8>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,17:40:255,0,255	0/0:37,0:40:0,119,255	0/1:19,12:35:183,0,255
-chr21	27945556	chr21:27945556:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,4:7:63,0,16	0/1:1,3:5:48,0,3	0/1:7,5:13:50,0,95
-chr21	27946687	chr21:27946687:M	TTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:25:255,75,0	1/1:0,23:26:255,78,0	0/1:3,12:17:255,0,63
-chr21	27948655	chr21:27948655:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:8:127,15,0	1/1:0,5:7:152,18,0	0/1:4,1:6:13,0,97
-chr21	27948988	chr21:27948988:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:9:197,24,0	1/1:0,13:13:255,39,0	0/1:13,2:19:11,0,255
-chr21	27951397	chr21:27951397:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:16:174,6,0	0/1:5,6:11:71,0,53	0/0:18,1:19:0,38,255
-chr21	27955149	chr21:27955149:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,5:18:89,0,255	0/1:7,6:16:125,0,168	0/0:12,0:14:0,31,255
-chr21	27958196	chr21:27958196:M	ACACACACACACACACACACACACACACACACACAC	<24>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,5:17:89,0,255	0/1:12,5:22:86,0,255	0/1:17,4:25:66,0,255
-chr21	27963693	chr21:27963693:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:24:203,0,255	0/1:9,15:29:255,0,172	0/1:9,13:22:255,0,179
-chr21	27966629	chr21:27966629:M	CACACACACACACACACACACACACACGCACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,14:24:190,0,117	0/1:20,16:36:177,0,248	0/1:14,16:30:203,0,168
-chr21	27970738	chr21:27970738:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,16:30:204,0,151	0/1:8,10:19:116,0,93	0/1:13,9:23:93,0,172
-chr21	27977886	chr21:27977886:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:57,0,3	0/0:6,1:7:0,3,85	0/1:1,6:10:87,0,11
-chr21	28000880	chr21:28000880:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,64,0	1/1:0,7:10:140,26,0	1/1:1,13:14:211,23,0
-chr21	28007950	chr21:28007950:M	TTGTTGTTGTTTGTTTGTTTTTGTTGTTGTTGTTATTGTTG	<14>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:29,12:46:0,15,114	0/1:25,14:40:3,0,74	0/0:27,9:38:0,19,109
-chr21	28009794	chr21:28009794:M	CACACACACACACACACATTCTAGATACCCACACACATACACACATAAACACACACACACACACACACACACACA	<33.5>,<36.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:3,11,6:20:255,45,149,230,0,249	0/1:5,2,2:10:29,0,139,11,34,61	0/1:4,7,2:13:157,0,99,144,30,186
-chr21	28009932	chr21:28009932:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTGTGT	<25>	.	.	Motif=TG	GT:AD:DP:PL	0/0:15,0:18:0,43,213	0/1:7,12:20:112,0,43	0/0:15,0:15:0,43,210
-chr21	28020603	chr21:28020603:M	AGAGAGAGAGAGA	<8.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:21,14:35:255,0,255	0/1:17,17:35:255,0,255	0/1:17,9:26:215,0,255
-chr21	28027198	chr21:28027198:M	TTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:26:175,0,255	0/1:17,7:29:143,0,255	0/1:12,4:20:76,0,255
-chr21	28034621	chr21:28034621:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,13:28:160,0,198	0/1:20,10:32:93,0,255	0/1:21,19:40:228,0,255
-chr21	28051047	chr21:28051047:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:12:95,0,48	1/1:1,13:15:220,26,0	0/0:16,0:17:0,50,255
-chr21	28051175	chr21:28051175:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATATAAAATATATATATA	<19.5>,<25.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,6:9:231,231,231,26,26,0	2/2:0,0,1:3:59,59,59,9,9,0	1/1:0,3,0:3:94,9,0,94,9,94
-chr21	28053599	chr21:28053599:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<22>,<24>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,16,0:32:255,0,255,255,255,255	1/2:0,8,6:18:255,164,128,225,0,198	0/1:13,4,0:20:78,0,255,119,255,255
-chr21	28055573	chr21:28055573:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<13>,<15>	.	.	Motif=GT	GT:AD:DP:PL	0/3:14,0,0,13:27:167,244,255,243,255,255,0,255,225,186	2/3:1,0,17,9:27:255,255,255,142,246,189,255,255,0,255	0/1:12,17,0,1:30:255,0,255,255,226,255,255,200,255,255
-chr21	28056344	chr21:28056344:M	AAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,16,1:30:255,0,248,255,255,255	1/1:0,23,0:25:255,74,0,255,73,255	0/2:18,1,21:40:255,255,255,0,255,255
-chr21	28058283	chr21:28058283:M	TGTTTTTTTTTGTTTGTTTGTTTGTTT	<7>	.	.	Motif=TGTT	GT:AD:DP:PL	0/1:13,15:28:255,0,214	1/1:1,33:34:255,79,0	0/1:14,11:25:177,0,248
-chr21	28064292	chr21:28064292:M	AAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,3:22:24,73,255,0,255,255	2/2:0,0,11:13:255,255,255,38,36,0	0/1:7,9,0:18:206,0,160,233,193,255
-chr21	28066426	chr21:28066426:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,2:39:0,78,255	0/0:29,0:31:0,90,255	0/1:26,15:44:170,0,255
-chr21	28066490	chr21:28066490:M	AAAAAAAAAAGAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,25:41:255,0,186	1/1:0,33:33:255,97,0	0/1:25,16:41:181,0,255
-chr21	28071269	chr21:28071269:M	AAATAAATAAATAAATAAATAAATAAATA	<8.2>,<9.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,24,0:24:255,71,0,255,71,255	1/1:0,20,0:20:255,59,0,255,59,255	1/2:0,15,7:23:255,131,68,241,0,220
-chr21	28077985	chr21:28077985:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,3:44:0,73,255	0/1:24,26:52:255,0,255	0/0:37,4:43:0,53,255
-chr21	28079036	chr21:28079036:M	CACACACACACACACACACACACACACACACACACACACACACACACACAGACGCACATACACACA	<26>,<28>,<30>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,3,5:8:255,249,244,146,146,132,95,90,0,75	1/2:0,6,10,0:16:255,255,255,172,0,134,255,255,172,255	3/3:0,0,0,10:11:255,255,255,255,255,255,33,33,30,0
-chr21	28081085	chr21:28081085:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:17:0,31,255	0/1:11,6:18:51,0,147	0/0:18,3:24:0,16,255
-chr21	28094804	chr21:28094804:M	AGATAGATAGATAGATAGATAGATAGACAGACAGACAGACAGACAGATAGAT	<13.2>	.	.	Motif=AGAT	GT:AD:DP:PL	1/1:0,16:16:146,40,0	1/1:0,21:22:191,52,0	1/1:0,22:22:201,55,0
-chr21	28098537	chr21:28098537:M	TTTATTTATTTAATTTTTTTAATTTA	<5.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:37,0:39:0,109,255	0/1:15,13:32:165,0,201	0/0:29,0:32:0,85,255
-chr21	28101323	chr21:28101323:M	AATATTAATATTA	<2.7>	.	.	Motif=AATATT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:5,5:10:109,0,111	0/0:28,0:28:0,84,255
-chr21	28106215	chr21:28106215:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,17:36:212,0,249	0/0:16,0:16:0,47,255	0/1:30,28:58:255,0,255
-chr21	28106678	chr21:28106678:M	TTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:23,12:37:237,0,255	0/0:41,0:41:0,123,255
-chr21	28114773	chr21:28114773:M	TATATATATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,22:38:255,0,255	0/0:25,0:27:0,75,255	0/1:12,25:39:255,0,210
-chr21	28114796	chr21:28114796:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:40,0:40:0,119,255	0/1:20,10:32:132,0,255	0/0:49,0:49:0,146,255
-chr21	28120501	chr21:28120501:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:35:255,83,0	1/1:1,21:24:255,53,0	1/1:1,26:29:255,67,0
-chr21	28129676	chr21:28129676:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,23,13:37:255,225,139,255,0,255	1/1:1,31,0:32:255,76,0,255,94,255	1/2:1,19,21:42:255,255,255,255,0,241
-chr21	28132778	chr21:28132778:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:35:255,66,0	1/1:4,34:39:255,44,0	1/1:3,33:38:255,57,0
-chr21	28134457	chr21:28134457:M	GAATGAATGAATGAATGAATGAATGAATGAATGA	<7.5>,<10.5>	.	.	Motif=GAAT	GT:AD:DP:PL	0/2:21,0,17:38:255,255,255,0,255,255	0/1:13,16,0:29:208,0,153,255,236,255	0/2:15,0,9:24:190,236,255,0,255,255
-chr21	28136091	chr21:28136091:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,8,15:23:255,255,255,249,0,193	1/2:0,11,7:19:255,207,164,255,0,255	1/2:0,8,6:15:255,188,153,241,0,211
-chr21	28141738	chr21:28141738:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:4,8:12:184,0,74	0/0:25,0:25:0,75,255
-chr21	28142238	chr21:28142238:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:49:0,144,255	0/1:17,13:31:150,0,211	0/0:50,2:53:0,119,255
-chr21	28147674	chr21:28147674:M	ACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,5:17:92,0,223	0/0:10,0:10:0,30,255	0/1:3,4:8:97,0,56
-chr21	28149925	chr21:28149925:M	CGCGCGCGCGCGCG	<4>,<5>	.	.	Motif=CG	GT:AD:DP:PL	2/2:0,0,1:1:20,13,10,3,3,0	0/0:15,0,0:15:0,45,255,44,255,255	1/2:1,3,4:8:120,25,25,16,0,11
-chr21	28149938	chr21:28149938:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17.5>,<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,8,0:19:255,95,38,128,0,72,255,71,122,255	0/2:15,1,5,0:24:85,43,255,0,255,255,64,255,255,255	1/3:0,9,2,7:18:255,150,102,160,56,107,189,0,77,144
-chr21	28168360	chr21:28168360:M	TAAAATAAAAGGTATAATCAAATAAAAGAATAATAAAATAAAA	<8>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:13,8:21:146,0,255	0/0:27,0:27:0,81,255	0/1:20,18:38:255,0,255
-chr21	28168793	chr21:28168793:M	GTGTGTGTGTGGGTGTGTATGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,15:27:208,0,149	0/0:31,1:32:0,76,255	0/1:13,20:34:255,0,142
-chr21	28169645	chr21:28169645:M	AATTAATTAATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:13,16:29:223,0,166	0/0:30,0:30:0,88,255	0/1:17,16:33:203,0,223
-chr21	28173037	chr21:28173037:M	TATATATATATATATATATATATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	.	0/0:5,0:5:0,15,88	1/1:1,23:24:255,53,0
-chr21	28177833	chr21:28177833:M	AAAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:8,17:28:255,0,136	1/1:0,21:21:255,63,0
-chr21	28177937	chr21:28177937:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,37:43:255,91,0	0/1:12,8:22:80,0,124	0/1:21,25:47:255,0,209
-chr21	28179995	chr21:28179995:M	TATATATATACATATATAT	<11.5>,<12.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,20,13,0:33:255,140,43,201,0,112,255,141,209,255	0/2:19,0,16,0:35:255,153,255,0,255,255,255,255,255,255	1/3:0,8,0,3:12:195,66,43,142,64,127,147,0,86,194
-chr21	28180018	chr21:28180018:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<10>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:15,10:28:168,0,255	0/1:23,5:32:48,0,255	0/1:7,4:15:64,0,135
-chr21	28186676	chr21:28186676:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:89,9,0	0/0:8,0:9:0,14,234	0/1:2,1:5:16,0,70
-chr21	28188143	chr21:28188143:M	GAGAGAAAGACAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:17,24:41:255,0,187	0/1:25,19:44:226,0,255
-chr21	28194002	chr21:28194002:M	AAAAAAAAGAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,34:34:255,255,255,102,101,0	0/2:9,2,13:27:255,216,255,0,145,212	1/2:0,17,17:34:255,255,215,255,0,214
-chr21	28194845	chr21:28194845:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:80,9,0	.	1/1:0,1:1:26,3,0
-chr21	28205871	chr21:28205871:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:156,18,0	0/1:1,4:6:107,0,10	0/0:0,0:3:0,1,2
-chr21	28206704	chr21:28206704:M	TCTTTTGCTTTTTCTTTTCTTTTTTTTTTTTTTCTTTTTTTTT	<6.8>	.	.	Motif=TCTTTT	GT:AD:DP:PL	1/1:0,14:15:255,42,0	0/1:3,11:15:236,0,39	1/1:0,18:18:255,54,0
-chr21	28216326	chr21:28216326:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:24:0,42,255	0/0:27,1:30:0,70,255	0/1:11,15:27:189,0,126
-chr21	28225063	chr21:28225063:M	AAAGAAAAAGAAAGAAAGAGAAAAA	<2.5>	.	.	Motif=AAAGAA	GT:AD:DP:PL	0/1:32,14:46:131,0,255	0/1:40,9:49:26,0,255	0/1:17,8:37:96,0,255
-chr21	28234141	chr21:28234141:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,30,0:33:255,59,0,255,92,255	1/1:1,30,2:33:255,79,0,255,62,255	1/2:2,13,7:24:255,89,71,151,0,188
-chr21	28237991	chr21:28237991:M	CACACACACACACACACACACACACACACAC	<17.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,11:22:255,195,133,194,0,132	0/2:22,0,4:26:38,67,255,0,255,255	1/2:0,12,16:29:255,255,196,208,0,137
-chr21	28256095	chr21:28256095:M	ATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAA	<8.2>,<9.2>	.	.	Motif=ATATA	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,3,0:5:76,0,9,48,0,40	1/2:0,4,6:10:255,112,84,75,0,46
-chr21	28264840	chr21:28264840:M	AAAAAAAAAAAAGATAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0:28:0,83,255	0/0:29,0:32:0,92,255	0/1:22,9:32:146,0,255
-chr21	28264967	chr21:28264967:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/0:21,0:26:0,71,255	0/1:13,10:25:193,0,255
-chr21	28265082	chr21:28265082:M	AAAAACAAAAACAAAAAC	<5>	.	.	Motif=AAAAAC	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:22,0:22:0,66,255	0/1:13,10:23:195,0,255
-chr21	28266771	chr21:28266771:M	TTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTATTCTTTTTTTTTTTTTTTTT	<53>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:102,18,0	0/1:2,7:10:95,0,4	0/1:6,5:11:51,0,68
-chr21	28267754	chr21:28267754:M	TTTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,12:14:210,245,255,23,41,0	0/2:2,0,11:14:148,185,255,0,35,4	1/2:0,10,4:18:255,67,65,255,0,255
-chr21	28284744	chr21:28284744:M	ACACACACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,48:49:255,147,0	1/1:0,26:27:255,81,0
-chr21	28288702	chr21:28288702:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,2:8:12,0,73	0/1:3,3:7:40,0,30	0/0:10,0:10:0,29,172
-chr21	28292366	chr21:28292366:M	GAGAGAGAGAGAGAGAGAGAGA	<13>,<14>	.	.	Motif=GA	GT:AD:DP:PL	2/2:0,2,30:32:255,255,255,95,57,0	2/2:0,4,47:51:255,255,255,152,79,0	1/2:0,18,14:32:255,253,161,255,0,234
-chr21	28300160	chr21:28300160:M	ATTTATTTATTTATTTATTTATGTATTTATTTATTTATTTATTT	<10>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,12:12:220,35,0	0/1:12,16:28:220,0,144
-chr21	28309061	chr21:28309061:M	ATATATATGTGTATATATATATATATGCATATAAATATATATAT	<39>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:8:190,21,0	1/1:0,3:3:81,9,0	0/0:15,1:16:0,21,255
-chr21	28312992	chr21:28312992:M	AAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAA	<25>,<26>,<33>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,2,0:9:234,34,8,112,0,89,234,34,112,234	1/1:0,20,1,0:24:255,71,0,255,53,255,255,71,255,255	2/3:2,0,5,5:15:175,124,222,40,145,137,114,84,0,137
-chr21	28314045	chr21:28314045:M	AAAAGAAAAAAAAAAAACAAAAAAACAAAAAAAAA	<36>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28,1:30:255,70,0,255,70,255	1/2:0,12,4:16:255,68,22,173,0,161	1/1:0,21,0:21:255,62,0,255,62,255
-chr21	28314789	chr21:28314789:M	ATATATATATATATATATA	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:42,0:46:0,135,255	0/0:16,0:17:0,51,255	0/1:25,14:40:255,0,255
-chr21	28314875	chr21:28314875:M	TATATATAGATATATATATATATGTGTGTATATATATATATAT	<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,17:17:255,50,0	1/1:0,17:17:255,50,0
-chr21	28319699	chr21:28319699:M	ATAATATAATATATTATATATATATATATAAAATATAATATAAT	<9.6>,<10>	.	.	Motif=ATAAT	GT:AD:DP:PL	1/2:0,7,5:12:255,127,105,179,0,162	2/2:0,0,1:1:28,28,28,3,3,0	2/2:0,0,1:3:27,27,27,2,2,0
-chr21	28324507	chr21:28324507:M	CACACACACACACACACACACACACACACA	<18>,<19>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,11:18:255,196,145,124,0,73	1/2:0,15,9:25:255,153,81,255,0,195	0/2:17,2,10:31:224,138,255,0,255,255
-chr21	28330674	chr21:28330674:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16,0:19:255,38,0,255,53,255	1/1:2,15,0:19:237,22,0,255,50,255	1/2:1,6,5:13:146,68,100,95,0,146
-chr21	28334329	chr21:28334329:M	TATATAAATACATATACATATATATATGTACATTTATATATATATATATACACATTTTTATATATATACATATATATA	<40>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:10:189,30,0	.	0/0:2,0:2:0,6,37
-chr21	28336739	chr21:28336739:M	TATATATATATATATATATATATATATATAT	<21.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,3:7:197,47,26,63,0,42	.	2/2:0,0,2:4:63,37,31,6,6,0
-chr21	28341280	chr21:28341280:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:16:0,28,232	0/1:6,3:9:24,0,75	0/0:6,1:8:0,6,97
-chr21	28350605	chr21:28350605:M	GAGAGAGAGAGAGAGAGAGAGAG	<10.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,29:30:255,88,0	0/1:14,15:29:196,0,174
-chr21	28355701	chr21:28355701:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,19:40:240,0,250	0/1:22,18:41:193,0,255	0/1:26,20:47:232,0,255
-chr21	28356871	chr21:28356871:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,10:17:255,255,239,82,0,53	1/2:0,6,3:9:222,74,54,146,0,137	0/2:2,0,4:7:108,112,160,0,52,38
-chr21	28358629	chr21:28358629:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:30:148,0,202	0/1:16,24:42:255,0,152	0/1:20,21:43:246,0,247
-chr21	28364391	chr21:28364391:M	TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<9.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,13:14:255,34,0	1/1:0,8:9:214,24,0	1/1:0,18:18:255,54,0
-chr21	28370023	chr21:28370023:M	TTTTGTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:20,16:37:184,0,245	0/0:46,0:46:0,136,255
-chr21	28374560	chr21:28374560:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:49:0,145,255	0/1:24,14:38:138,0,255	0/0:55,0:57:0,167,255
-chr21	28383471	chr21:28383471:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,29,0:52:255,0,255,255,255,255	0/1:27,29,1:57:255,0,255,255,255,255	1/2:2,18,20:40:255,255,255,255,0,255
-chr21	28388007	chr21:28388007:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<18>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,14,0:27:255,0,255,255,223,255	0/1:11,15,0:30:255,0,249,255,197,255	1/2:0,14,6:23:255,105,102,255,0,255
-chr21	28406523	chr21:28406523:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:95,4,0	1/1:0,5:5:66,14,0	1/1:0,8:11:84,5,0
-chr21	28409173	chr21:28409173:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:96,12,0	1/1:0,4:4:120,12,0	1/1:0,4:4:124,12,0
-chr21	28413975	chr21:28413975:M	TTTTTCTTTTTTTTTTTTTTTTCTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,1:3:11,0,6	1/1:0,5:6:73,6,0	0/0:1,0:2:0,6,29
-chr21	28414160	chr21:28414160:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,41,0	1/1:3,28:31:255,39,0	1/1:2,21:24:255,35,0
-chr21	28416295	chr21:28416295:M	TTTTTTTTTGTTTTTTTTTTTTTT	<23>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,5:8:180,142,134,44,0,51	1/2:0,2,3:12:119,95,101,21,0,41	1/2:1,5,1:9:101,35,35,66,0,142
-chr21	28416535	chr21:28416535:M	GGTTTGGGTTTGGGTTT	<22.5>	.	.	Motif=GGTTTG	GT:AD:DP:PL	0/0:45,6:51:0,79,255	0/1:36,12:48:3,0,255	0/0:40,3:43:0,92,255
-chr21	28417429	chr21:28417429:M	GTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<24>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,1,7:13:201,78,64,176,53,173,123,0,98,103	2/3:0,3,2,13:22:238,169,167,143,70,126,99,33,0,70	1/2:0,6,5,4:17:255,126,125,138,0,129,230,98,104,235
-chr21	28438165	chr21:28438165:M	TCTCTCTCTCTCT	<10.5>,<11.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,1,51:53:255,255,255,158,124,0	2/2:0,2,27:29:255,255,255,87,55,0	1/2:0,10,13:24:255,169,99,142,0,72
-chr21	28446082	chr21:28446082:M	CTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTGTCTCTC	<23.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,18:18:255,54,0	0/1:7,9:16:196,0,141
-chr21	28454591	chr21:28454591:M	TGTGTGTGTTTGTGTGTGTGTGTGTGTGCATGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,15:16:255,28,0	1/1:0,18:19:255,42,0	0/1:10,12:22:162,0,121
-chr21	28463741	chr21:28463741:M	ACAAACAAACAAACAAACAAA	<5.5>	.	.	Motif=ACAA	GT:AD:DP:PL	1/1:1,17:20:108,25,0	1/1:0,28:31:193,52,0	1/1:0,26:30:185,49,0
-chr21	28471376	chr21:28471376:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,49:49:255,144,0	0/1:25,25:50:255,0,255
-chr21	28472428	chr21:28472428:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,0,13:15:195,201,248,9,43,0	1/2:0,10,17:27:255,237,207,166,0,90	0/2:8,2,12:24:162,130,255,0,102,82
-chr21	28480083	chr21:28480083:M	CTCTCTCTCTCTCTCT	<6>	.	.	Motif=CT	GT:AD:DP:PL	1/1:1,26:33:255,37,0	1/1:0,28:40:255,62,0	0/1:12,18:38:255,0,255
-chr21	28480098	chr21:28480098:M	TATATATATATATATATATAT	<7.5>,<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,23,13:41:255,188,80,255,0,255	1/1:0,42,0:46:255,137,0,255,130,255	0/2:12,2,19:37:255,245,255,0,255,208
-chr21	28482391	chr21:28482391:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:1,31:34:255,81,0	0/1:15,10:27:101,0,209
-chr21	28485051	chr21:28485051:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:43,8,0	1/1:0,7:7:108,20,0	0/1:1,4:5:49,0,1
-chr21	28486604	chr21:28486604:M	AAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,27:27:255,80,0	1/1:0,27:27:255,80,0
-chr21	28495194	chr21:28495194:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,39:41:255,83,0	1/1:0,30:32:255,93,0	1/1:1,43:45:255,114,0
-chr21	28499874	chr21:28499874:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,40,0	0/1:7,25:34:255,0,32	1/1:2,33:36:255,60,0
-chr21	28501934	chr21:28501934:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:69,12,0	1/1:0,2:4:53,11,0	0/1:3,3:7:41,0,31
-chr21	28506326	chr21:28506326:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:62,11,0	1/1:0,2:3:43,8,0	1/1:0,6:7:113,20,0
-chr21	28512558	chr21:28512558:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:64,12,0	0/1:1,3:5:35,0,14	0/1:1,2:3:25,0,8
-chr21	28516788	chr21:28516788:M	ATATATATATATATATATATA	<11.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,17,13:31:255,249,163,255,0,228	1/2:0,4,7:11:242,122,92,60,0,39	1/1:1,44,0:45:255,114,0,255,132,255
-chr21	28540406	chr21:28540406:M	ATATACTATATATATATATATATGTCATATATA	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,24:24:255,71,0	1/1:0,13:13:231,38,0	1/1:1,31:32:255,76,0
-chr21	28544464	chr21:28544464:M	TATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4:6:42,11,0	1/1:0,1:1:10,3,0	1/1:0,2:2:21,5,0
-chr21	28559670	chr21:28559670:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:13:195,20,0	0/1:1,6:11:91,0,8	1/1:0,8:10:121,9,0
-chr21	28561175	chr21:28561175:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:42:255,124,0	1/1:1,53:54:255,141,0	1/1:1,42:45:255,104,0
-chr21	28562301	chr21:28562301:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:19:72,0,155	0/1:11,10:23:107,0,145	0/0:29,3:34:0,43,255
-chr21	28562488	chr21:28562488:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:140,12,0	0/1:3,7:10:87,0,20	1/1:1,9:11:146,14,0
-chr21	28563171	chr21:28563171:M	CTCTCCCTCTCCCTCTCCCTCTCCC	<5.2>	.	.	Motif=CTCTCC	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,27:27:255,79,0	1/1:0,30:30:255,89,0
-chr21	28566812	chr21:28566812:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:168,17,0	0/1:2,4:8:55,0,14	1/1:2,11:13:155,4,0
-chr21	28569477	chr21:28569477:M	ACACACACACACACACACACACACACACACACACACACAC	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,15:15:255,45,0	1/1:0,9:9:234,27,0	1/1:0,15:19:255,38,0
-chr21	28569628	chr21:28569628:M	ACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,34:34:255,100,0	1/1:0,43:43:255,127,0
-chr21	28572830	chr21:28572830:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<24>,<25>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,5,0:19:255,135,90,255,0,255,255,86,255,255	2/3:0,0,5,9:14:255,255,255,149,149,109,84,83,0,42	1/2:0,4,7,0:12:255,184,165,116,0,93,237,118,116,218
-chr21	28580569	chr21:28580569:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:55,9,0	1/1:0,4:4:70,12,0	0/1:1,6:8:85,0,4
-chr21	28585330	chr21:28585330:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<10.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:8,3:11:22,0,113	1/1:0,25:25:255,74,0
-chr21	28587176	chr21:28587176:M	AAAAAAAAAAAAAA	<10>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,12:25:153,222,255,0,221,152	0/1:16,14,1:31:255,0,255,255,255,255	2/2:1,0,29:30:255,255,255,70,90,0
-chr21	28588983	chr21:28588983:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:12,5:19:34,0,166	0/0:17,2:24:0,29,255
-chr21	28595764	chr21:28595764:M	TTTATTTTACTTTATTTATTTATTTATTTATTTATTT	<10.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,9:22:109,0,186	0/1:6,15:21:210,0,47	1/1:0,25:25:255,74,0
-chr21	28601605	chr21:28601605:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<15.5>,<21.5>,<24.5>	.	.	Motif=TC	GT:AD:DP:PL	1/3:0,12,0,7:20:255,204,165,255,203,255,255,0,255,255	0/1:12,4,0,0:16:76,0,255,111,202,255,112,255,255,255	2/3:2,0,10,6:19:255,255,255,135,170,134,138,255,0,255
-chr21	28603550	chr21:28603550:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:11,0,2:18:46,83,255,0,255,255	1/2:0,6,6:14:255,163,142,179,0,161	0/0:22,0,0:23:0,69,255,69,255,255
-chr21	28608389	chr21:28608389:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:22:135,0,135	0/1:21,18:40:204,0,246	1/1:0,32:35:255,101,0
-chr21	28609568	chr21:28609568:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:18:159,0,57	1/1:0,14:19:255,52,0	0/0:15,0:18:0,50,255
-chr21	28611912	chr21:28611912:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,0:11:0,33,255,32,222,193	0/1:4,8,0:13:186,0,77,131,65,165	0/2:8,0,4:13:31,57,255,0,143,109
-chr21	28613075	chr21:28613075:M	GATAGATAGATAGATAGATAGAAAGATAGATAGATAGATAGATAGACAGATCTACAGATAGATAGATA	<16>	.	.	Motif=GATA	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:9,5:14:49,0,121	0/0:11,0:11:0,32,206
-chr21	28613620	chr21:28613620:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1,0:2:45,6,0,33,6,29	2/2:0,0,11:12:255,208,177,32,32,0	1/1:0,8,0:9:255,27,0,167,26,144
-chr21	28617791	chr21:28617791:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,8:24:255,127,82,255,0,196	1/2:0,15,13:29:255,192,144,255,0,191	1/1:0,36,0:37:255,111,0,255,109,255
-chr21	28631798	chr21:28631798:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,1:39:0,96,255	0/0:33,2:38:0,63,255	0/1:21,26:48:255,0,240
-chr21	28635102	chr21:28635102:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,3:33:0,41,255	0/0:21,3:25:0,11,255	0/1:13,6:20:58,0,176
-chr21	28647509	chr21:28647509:M	AAAAAAAAAAAAAAAAAGAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:6:52,0,17	1/1:1,7:8:100,7,0	1/1:0,6:8:122,23,0
-chr21	28649850	chr21:28649850:M	AATAATAAAATAATAA	<6.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/0:43,0:43:0,127,255	0/1:15,11:26:130,0,204
-chr21	28672960	chr21:28672960:M	AGAAAGAAAAAAAATAAAAAAAGAGAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGA	<16>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:5,6:11:74,0,55	0/1:4,0:8:1,0,50	0/1:3,1:5:6,0,40
-chr21	28700831	chr21:28700831:M	ACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/0:36,0:36:0,108,255	0/1:14,24:38:255,0,255
-chr21	28701547	chr21:28701547:M	CACACACACACATACACACACACACACACACACACACACACACACACACA	<15>,<24>	.	.	Motif=CA	GT:AD:DP:PL	0/2:8,0,13:21:169,228,255,0,142,81	0/2:7,0,11:19:142,194,255,0,118,63	0/1:4,15,1:20:255,0,68,255,52,255
-chr21	28702310	chr21:28702310:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:43:0,126,255	0/0:44,1:47:0,119,255	0/1:25,24:51:255,0,255
-chr21	28704558	chr21:28704558:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:23:0,67,255	0/1:9,4:15:23,0,124	0/1:10,23:35:255,0,77
-chr21	28705329	chr21:28705329:M	CTTTTCTTTTCTTT	<2>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/0:49,0:49:0,147,255	0/1:27,25:52:255,0,255
-chr21	28707257	chr21:28707257:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:20:0,57,255	0/0:18,0:21:0,62,255	0/1:16,11:30:221,0,255
-chr21	28708225	chr21:28708225:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/0:37,0:37:0,109,255	0/1:21,36:57:255,0,220
-chr21	28718618	chr21:28718618:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,2:45:0,95,255	0/0:45,0:45:0,132,255	0/1:30,33:63:255,0,255
-chr21	28724548	chr21:28724548:M	TTGTTTGTTTGTTTGTTTGTTT	<4.5>	.	.	Motif=TTGT	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/0:40,0:40:0,118,255	0/1:18,24:42:255,0,215
-chr21	28726870	chr21:28726870:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:17:0,50,255	0/0:18,0:22:0,64,255	0/1:9,6:20:118,0,217
-chr21	28730374	chr21:28730374:M	ACACACACAGACACACACACACACACACACACACACACACACACA	<21.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18,0:19:255,56,0,255,57,255	1/1:0,16,0:19:255,55,0,255,57,255	1/2:0,11,5:18:255,137,102,201,0,255
-chr21	28731760	chr21:28731760:M	AAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,96,255	0/0:34,0:39:0,113,255	0/1:12,28:41:255,0,209
-chr21	28746673	chr21:28746673:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:38:255,90,0	1/1:0,41:42:255,123,0	1/1:0,43:45:255,131,0
-chr21	28753357	chr21:28753357:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:15:0,39,255	0/0:8,0:9:0,27,221	0/1:15,16:35:255,0,255
-chr21	28761600	chr21:28761600:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:38:0,111,255	0/0:30,2:34:0,64,255	0/1:15,15:31:179,0,189
-chr21	28767425	chr21:28767425:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:35:0,103,255	0/0:46,0:47:0,138,255	0/1:14,20:34:255,0,157
-chr21	28771007	chr21:28771007:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/0:42,0:42:0,124,255	0/1:22,25:47:255,0,255
-chr21	28774589	chr21:28774589:M	AAAAAAAAAGAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:38:0,114,255	0/0:45,0:45:0,135,255	0/1:21,23:45:255,0,255
-chr21	28808412	chr21:28808412:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:24,1,12:38:114,201,255,0,255,255	1/2:3,16,15:35:255,207,255,232,0,255	0/2:19,2,9:30:70,121,255,0,242,255
-chr21	28811250	chr21:28811250:M	GAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAGAAAG	<33.8>	.	.	Motif=GAAA	GT:AD:DP:PL	0/0:22,0:24:0,66,255	0/0:12,0:14:0,36,255	0/1:12,7:19:17,0,250
-chr21	28819545	chr21:28819545:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:29:0,61,255	0/0:13,1:15:0,27,210	0/1:11,4:16:22,0,154
-chr21	28822573	chr21:28822573:M	ATATATATATATATATATACACATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/0:23,0:24:0,68,255	0/1:19,14:34:156,0,255
-chr21	28830878	chr21:28830878:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,3,13:18:214,147,185,19,2,0	2/2:1,0,14:15:206,209,233,28,43,0	1/2:1,6,6:13:201,64,70,79,0,60
-chr21	28856084	chr21:28856084:M	TTATTTTATTT	<1.2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:54,0:54:0,160,255	0/0:32,0:32:0,94,255	0/1:21,22:43:255,0,255
-chr21	28863411	chr21:28863411:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<12>	.	.	Motif=TA	GT:AD:DP:PL	0/0:0,0:4:0,0,0	1/1:0,5:5:155,15,0	.
-chr21	28864809	chr21:28864809:M	AGACAGACAGACAGA	<1.8>	.	.	Motif=AGAC	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,3:4:80,9,0	0/0:26,2:28:0,31,255
-chr21	28866176	chr21:28866176:M	ACACACACACACA	<7>,<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,9:19:234,166,129,56,0,153	1/2:0,3,11:14:255,211,183,17,0,19	0/0:25,3,2:30:0,31,114,36,162,255
-chr21	28877180	chr21:28877180:M	GAGGGAGGGAGGAAGGAAGGGAGGGAAGGGAG	<3.2>,<9>	.	.	Motif=GAGG	GT:AD:DP:PL	1/2:1,3,15:19:223,197,255,53,0,22	1/2:1,4,10:15:185,124,239,77,0,59	0/1:11,2,1:16:31,0,255,50,140,173
-chr21	28879081	chr21:28879081:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:174,18,0	1/1:0,1:1:29,3,0	1/1:0,2:3:67,9,0
-chr21	28880929	chr21:28880929:M	AAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,55,255	0/0:17,0:22:0,61,255	0/1:4,3:10:32,0,61
-chr21	28881626	chr21:28881626:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,6:8:200,104,82,35,0,12	1/2:0,3,4:8:188,67,44,60,0,39	0/2:2,0,1:4:19,20,76,0,54,48
-chr21	28886202	chr21:28886202:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:30:255,84,0	1/1:0,36:40:255,108,0	0/1:21,14:38:255,0,255
-chr21	28888334	chr21:28888334:M	TTTTTTTTTTTTCTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,51,0	1/1:1,18:19:255,30,0	0/1:17,8:28:149,0,255
-chr21	28889765	chr21:28889765:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,24:26:255,255,255,75,72,0	1/2:0,7,11:18:255,255,255,182,0,145	1/2:0,12,6:20:255,174,131,255,0,255
-chr21	28894577	chr21:28894577:M	AAAAAAAAAAAGAAGAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:32:255,75,0	1/1:0,32:33:255,96,0	0/1:13,18:32:231,0,151
-chr21	28901231	chr21:28901231:M	AAGAAAAAAAAGAAAAGAAAAGAAAA	<4.8>	.	.	Motif=AAGAA	GT:AD:DP:PL	1/1:1,38:39:255,94,0	1/1:0,27:27:255,81,0	0/1:16,13:29:211,0,255
-chr21	28901258	chr21:28901258:M	ATATATATATATATATGTATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,34:35:255,100,0	1/1:0,27:27:255,79,0	0/1:20,16:36:168,0,236
-chr21	28914934	chr21:28914934:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,17:18:255,52,0	1/1:0,26:27:255,79,0
-chr21	28926896	chr21:28926896:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:30,24:55:255,0,255	0/0:31,2:37:0,72,255	0/1:16,14:33:169,0,215
-chr21	28931067	chr21:28931067:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,22:32:255,0,179	0/0:32,0:37:0,96,255	1/1:0,40:41:255,120,0
-chr21	28933678	chr21:28933678:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,14:28:151,0,42	0/0:19,0:21:0,46,246	0/1:6,11:21:92,0,65
-chr21	28935840	chr21:28935840:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:23,0,23	0/0:12,1:14:0,24,192	0/1:7,4:12:34,0,94
-chr21	28947891	chr21:28947891:M	AAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,80,0	0/1:11,4:17:81,0,255	0/1:11,7:20:139,0,255
-chr21	28955923	chr21:28955923:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:83,9,0	0/0:4,0:6:0,15,123	0/1:3,6:9:138,0,58
-chr21	28960357	chr21:28960357:M	AAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAAAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:15:0,44,255	0/0:23,0:23:0,67,255	0/1:16,8:24:72,0,214
-chr21	28976119	chr21:28976119:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:32:165,0,230	0/1:17,25:42:255,0,174	0/0:32,0:33:0,87,255
-chr21	28977374	chr21:28977374:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:30,0,66	0/0:12,0:12:0,35,204	0/1:4,8:15:126,0,27
-chr21	28977928	chr21:28977928:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,4:23:9,0,255	0/1:23,8:31:49,0,255	0/0:35,0:35:0,103,255
-chr21	28980570	chr21:28980570:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,29:49:255,0,225	0/1:28,22:52:248,0,255	0/0:52,0:53:0,156,255
-chr21	28984653	chr21:28984653:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/0:46,1:48:0,121,255	0/1:16,16:33:195,0,205
-chr21	28988142	chr21:28988142:M	AAAAAAAAAAAAAAACAACAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,4:10:41,0,76	0/1:6,5:11:51,0,69	0/0:13,1:15:0,26,216
-chr21	28988467	chr21:28988467:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,3,4:20:15,16,232,0,146,212	0/0:23,1,1:25:0,56,255,56,255,255	1/2:1,19,12:35:255,200,244,255,0,255
-chr21	28991291	chr21:28991291:M	AAAAAAAAAAAAAAGAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:27:255,62,0	1/1:0,23:25:255,73,0	1/1:0,35:38:255,108,0
-chr21	28994777	chr21:28994777:M	ATATATATATATATATATTTATGCATATATATATAATATA	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,9:14:130,0,53	0/1:7,9:16:114,0,78	0/0:13,0:13:0,38,240
-chr21	28996019	chr21:28996019:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:27:0,76,255	0/1:11,8:21:79,0,130	0/1:16,7:25:50,0,203
-chr21	28996948	chr21:28996948:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:32:137,0,222	0/0:24,0:26:0,76,255	0/1:1,13:22:207,0,9
-chr21	29002115	chr21:29002115:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,18:20:255,22,0	0/0:11,1:13:0,21,184	0/1:14,17:33:219,0,164
-chr21	29003606	chr21:29003606:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:153,57,42,81,0,68	2/2:0,0,4:4:115,112,109,12,12,0	1/2:0,4,2:8:171,49,30,119,0,111
-chr21	29009393	chr21:29009393:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,13:19:196,0,17	0/1:7,10:18:129,0,68	0/0:9,1:10:0,12,142
-chr21	29010608	chr21:29010608:M	AAAAAATAAAAATAAAAAAAAAAAACCAAAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:19:63,0,144	0/0:7,1:8:0,6,103	0/1:3,2:5:21,0,38
-chr21	29012771	chr21:29012771:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,1:30:0,70,255	0/1:14,24:39:255,0,145	0/0:50,2:53:0,111,255
-chr21	29013689	chr21:29013689:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:13:0,35,207	0/0:16,0:17:0,49,255	0/1:2,3:5:36,0,19
-chr21	29016564	chr21:29016564:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,30:47:255,0,180	0/1:21,24:45:255,0,239	0/0:41,0:41:0,121,255
-chr21	29019351	chr21:29019351:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:29:255,86,0	1/1:0,37:38:255,114,0	1/1:0,27:28:255,81,0
-chr21	29019534	chr21:29019534:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,16,0:17:255,32,0,255,50,255	1/2:2,5,6:14:185,69,66,38,0,70	0/1:14,11,0:25:122,0,176,164,246,255
-chr21	29021802	chr21:29021802:M	AAAAAAAAGAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,13:24:179,0,115	0/1:13,16:31:190,0,155	0/1:12,15:30:187,0,151
-chr21	29026456	chr21:29026456:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:20,0,9	0/1:4,8:12:100,0,33	1/1:0,8:9:149,26,0
-chr21	29026538	chr21:29026538:M	TTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:4:0,12,96	0/0:0,0:1:0,3,12	1/1:0,6:7:175,17,0
-chr21	29028124	chr21:29028124:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,7:22:63,0,211	0/1:13,7:22:66,0,173	0/1:7,6:13:69,0,87
-chr21	29034298	chr21:29034298:M	TTTTCTTTTTTTTTTTTTTTTTATTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,9:18:117,0,91	0/1:11,8:19:81,0,132	0/1:6,5:13:60,0,77
-chr21	29037580	chr21:29037580:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,1:4:5,14,90,0,51,40	0/1:2,2,0:4:52,0,44,33,32,54	1/2:0,3,3:6:126,42,33,51,0,33
-chr21	29044448	chr21:29044448:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,2,6:15:67,73,225,0,72,105	1/2:3,13,3:19:178,7,36,179,0,255	0/0:15,0,1:16:0,47,255,29,254,251
-chr21	29047910	chr21:29047910:M	TGTGTGTGTGTGT	<4.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/0:33,0:33:0,99,255	0/1:26,26:53:255,0,255
-chr21	29048049	chr21:29048049:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,7:15:162,0,152	0/0:6,0:7:0,18,167	1/1:0,7:9:193,20,0
-chr21	29054601	chr21:29054601:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:5:17,4,0	1/1:0,4:8:155,18,0	1/1:0,0:2:28,6,0
-chr21	29057167	chr21:29057167:M	TTTTTTTTTTTTTTTCTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:25:99,0,200	0/1:10,11:21:130,0,112	0/0:27,0:28:0,82,255
-chr21	29058594	chr21:29058594:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:174,29,0	1/1:3,17:21:254,9,0	1/1:0,15:16:255,44,0
-chr21	29060086	chr21:29060086:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12:30:127,0,236	0/0:24,1:26:0,59,255	1/1:0,27:28:255,82,0
-chr21	29066082	chr21:29066082:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,13:14:255,39,0	1/1:0,12:12:255,36,0
-chr21	29083833	chr21:29083833:M	TGTGTGTGTGTGTGTATATATGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:27:0,78,255	0/0:14,0:14:0,41,251	0/1:13,7:20:71,0,182
-chr21	29087579	chr21:29087579:M	TTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,1:9:13,0,78	0/1:3,1:6:11,0,44	1/1:0,6:9:123,23,0
-chr21	29089169	chr21:29089169:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,3:3:89,89,89,9,9,0	2/2:0,0,2:4:86,86,86,12,12,0	1/1:0,11,0:13:255,39,0,255,39,255
-chr21	29095142	chr21:29095142:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	0/1:15,12:27:130,0,185	1/1:2,13:16:209,10,0
-chr21	29100084	chr21:29100084:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:12:97,0,27	0/1:5,2:8:19,0,60	0/0:1,0:1:0,3,17
-chr21	29102460	chr21:29102460:M	TCTCTCTCTCTCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:22,0:24:0,69,255	0/0:17,0:19:0,56,255	0/1:11,10:23:164,0,221
-chr21	29102478	chr21:29102478:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2,4:13:52,0,89,2,19,35	0/1:4,1,0:9:1,0,113,12,76,73	1/2:1,5,7:16:181,61,65,64,0,41
-chr21	29111265	chr21:29111265:M	AAAAACAAAACAACAACAACAACAACAACAAAAA	<5.2>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,31:31:255,93,0	0/1:18,19:37:255,0,255	1/1:0,30:30:255,90,0
-chr21	29119663	chr21:29119663:M	TTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,8,5:15:202,88,93,104,0,204	0/1:11,5,0:17:35,0,148,84,194,255	1/2:1,6,2:11:139,45,39,88,0,150
-chr21	29120180	chr21:29120180:M	TTTTCTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,23:47:255,0,255	0/0:32,0:32:0,94,255	0/1:16,18:34:231,0,192
-chr21	29120657	chr21:29120657:M	TTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTGTTTCTTTCTTTCCTTTCTCTCCTTCTCTCTTTCTTT	<17>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,9:9:146,26,0	0/1:3,3:6:30,0,30	1/1:0,7:7:112,20,0
-chr21	29121056	chr21:29121056:M	ATATATATATATAGTGTATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,3:3:35,8,0	0/0:22,0:22:0,66,255	.
-chr21	29123056	chr21:29123056:M	TTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:83,9,0	0/1:1,3:6:91,0,10	1/1:0,1:2:42,6,0
-chr21	29128306	chr21:29128306:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:33:190,0,209	0/0:21,0:24:0,69,255	0/1:18,11:29:114,0,242
-chr21	29131818	chr21:29131818:M	TATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,15:37:255,0,255	0/0:57,0:57:0,171,255	0/1:32,21:53:255,0,255
-chr21	29136508	chr21:29136508:M	TTTTTTTCTTTTCTTTTTTATTTTATTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:17,8:25:70,0,232	1/1:0,33:33:255,97,0
-chr21	29139896	chr21:29139896:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:51,9,0	0/0:1,0:1:0,3,16	.
-chr21	29141513	chr21:29141513:M	AAAAAGAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:17:149,0,43	0/1:13,15:31:184,0,142	0/1:10,7:17:72,0,124
-chr21	29150772	chr21:29150772:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:24:0,52,255	0/1:4,6:10:73,0,39	0/0:23,2:26:0,41,255
-chr21	29154392	chr21:29154392:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:28:255,82,0	0/1:13,14:29:171,0,154	1/1:0,32:33:255,97,0
-chr21	29158918	chr21:29158918:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:7:51,0,15	0/1:4,4:8:44,0,43	0/1:6,6:13:73,0,65
-chr21	29159826	chr21:29159826:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,1,36:38:255,255,255,93,93,0	1/2:1,24,16:41:255,224,177,255,0,255	2/2:0,0,45:45:255,255,255,133,133,0
-chr21	29162312	chr21:29162312:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:40:255,108,0	0/1:25,23:49:255,0,255	1/1:1,40:42:255,96,0
-chr21	29162684	chr21:29162684:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,16:21:232,0,30	0/1:17,11:30:116,0,211	0/1:18,16:34:187,0,223
-chr21	29163353	chr21:29163353:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,29:47:255,0,210	0/0:56,0:56:0,165,255	0/1:25,29:54:255,0,255
-chr21	29163694	chr21:29163694:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:19:37,0,171	0/1:10,3:15:16,0,133	0/1:7,9:17:111,0,70
-chr21	29167694	chr21:29167694:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,4:11:228,70,41,89,0,65	1/2:1,6,2:13:189,7,35,75,0,77	1/2:0,6,5:11:255,86,55,103,0,71
-chr21	29170622	chr21:29170622:M	TCTCTCTCTCTTTCTCT	<7>	.	.	Motif=TC	GT:AD:DP:PL	0/1:23,9:41:174,0,255	0/0:43,0:43:0,129,255	0/1:19,15:42:255,0,255
-chr21	29170638	chr21:29170638:M	TTTTTTTTTTCTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,20:39:242,0,224	0/0:37,0:37:0,108,255	0/1:13,18:31:222,0,136
-chr21	29170940	chr21:29170940:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:40:255,0,255	1/1:0,29:33:255,95,0	0/1:17,20:40:255,0,255
-chr21	29171807	chr21:29171807:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:8:116,0,33	1/1:0,4:6:128,17,0	0/1:3,5:11:112,0,68
-chr21	29172237	chr21:29172237:M	TTTTCTTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,4:12:184,72,92,144,0,222	1/1:0,41,0:43:255,126,0,255,129,255	1/2:0,19,2:23:255,35,3,255,0,255
-chr21	29176088	chr21:29176088:M	TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCT	<19>,<28>,<36>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	2/4:0,1,6,0,4:12:187,158,168,25,6,20,190,166,33,197,152,133,0,160,154	1/3:0,2,2,3,1:10:95,42,87,53,39,97,62,0,10,50,97,83,94,54,145	1/2:0,3,4,0,0:11:234,116,109,114,0,106,236,121,119,240,236,122,120,241,242
-chr21	29176172	chr21:29176172:M	TTTTTTTCTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:12:78,21,0	1/1:1,10:18:87,19,0	1/1:0,11:17:107,29,0
-chr21	29179544	chr21:29179544:M	CAAACAAACAAACAAACA	<5.5>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:12,15:27:193,0,139	1/1:0,34:34:255,100,0
-chr21	29180911	chr21:29180911:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>,<13.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:9,15,1:26:213,0,118,255,136,255	1/2:0,2,9:11:166,160,228,35,0,25	0/2:11,0,11:23:150,211,255,0,174,139
-chr21	29186228	chr21:29186228:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<12>,<13>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,1,28:29:255,255,255,84,67,0	1/2:1,11,14:26:255,232,177,150,0,134	2/2:0,0,32:32:255,255,255,96,94,0
-chr21	29186698	chr21:29186698:M	TGTGTGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,40:42:255,105,0	0/1:21,14:36:162,0,255	1/1:1,30:32:255,73,0
-chr21	29192034	chr21:29192034:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:127,15,0	.	1/1:0,1:1:28,3,0
-chr21	29193716	chr21:29193716:M	TTTGTTTTTTTGTTTGTTTGTTTTTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,23:23:255,68,0	1/1:0,28:28:255,83,0
-chr21	29202815	chr21:29202815:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:31:255,87,0	1/1:1,31:35:255,74,0	1/1:0,29:31:255,89,0
-chr21	29209502	chr21:29209502:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:15:34,0,123	0/1:14,5:20:27,0,175	0/1:10,4:18:28,0,140
-chr21	29217750	chr21:29217750:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:10:139,12,0	1/1:0,10:13:182,33,0	1/1:1,12:16:223,29,0
-chr21	29220759	chr21:29220759:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:32:237,0,163	1/1:0,38:40:255,114,0	0/1:13,15:29:193,0,149
-chr21	29231552	chr21:29231552:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,14:25:186,0,131	0/1:6,7:13:85,0,67	0/1:11,16:28:209,0,126
-chr21	29240964	chr21:29240964:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0,0:10:0,29,174,29,174,174	0/2:6,2,4:12:32,33,143,0,51,85	0/1:3,3,0:6:34,0,34,50,43,117
-chr21	29281612	chr21:29281612:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,16:27:216,0,123	0/1:10,11:22:139,0,110	0/0:24,1:25:0,55,255
-chr21	29296050	chr21:29296050:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,7:18:255,103,70,190,0,141	1/2:0,4,4:8:154,55,43,66,0,44	2/2:0,1,7:8:131,106,103,23,6,0
-chr21	29306170	chr21:29306170:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,16,8:24:255,255,255,122,144,74,255,255,0,218	1/3:0,12,3,9:26:255,181,237,255,102,255,255,0,255,255	0/2:10,0,10,1:21:240,255,255,0,255,235,159,255,158,255
-chr21	29309258	chr21:29309258:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,2:23:0,32,255	0/1:8,11:21:136,0,85	0/0:19,1:22:0,46,255
-chr21	29324557	chr21:29324557:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,24:25:255,75,0	1/1:0,35:35:255,105,0	1/1:0,29:32:255,93,0
-chr21	29339630	chr21:29339630:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:119,20,0	1/1:2,8:13:136,3,0	1/1:1,8:11:146,14,0
-chr21	29344635	chr21:29344635:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<17.5>,<18.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0,0:29:255,87,0,255,85,255,255,87,255,255	1/3:0,14,1,10:26:255,174,222,255,155,255,255,0,234,255	1/2:0,18,12,0:30:255,213,126,255,0,233,255,180,255,255
-chr21	29346278	chr21:29346278:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:44:255,129,0	1/1:1,37:39:255,97,0	1/1:1,62:63:255,167,0
-chr21	29358740	chr21:29358740:M	AGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAA	<20.2>	.	.	Motif=AGAA	GT:AD:DP:PL	.	1/1:0,6:6:160,18,0	.
-chr21	29360846	chr21:29360846:M	AAAAAAAAAAAAAAAACAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,54,255	0/1:6,7:14:141,0,118	0/0:11,0:13:0,33,255
-chr21	29377731	chr21:29377731:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:43,0:45:0,131,255	0/1:24,35:60:255,0,255
-chr21	29380744	chr21:29380744:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<8.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:11,15,0:26:255,0,251,255,211,255	0/0:8,0,0:8:0,24,239,24,168,146	1/2:0,9,10:19:255,187,255,255,0,236
-chr21	29381778	chr21:29381778:M	TGTGTGTGCCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:19,16:35:186,0,239	0/0:28,0:28:0,83,255
-chr21	29410941	chr21:29410941:M	TATATATATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,3:6:48,4,0	.	1/1:0,0:1:0,0,0
-chr21	29423027	chr21:29423027:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<13>	.	.	Motif=AG	GT:AD:DP:PL	0/0:26,0:28:0,78,255	0/1:16,10:28:192,0,255	0/0:42,1:44:0,102,255
-chr21	29431086	chr21:29431086:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,6,0:13:158,0,102,164,73,218	0/2:3,0,5:10:65,72,187,0,39,15	1/2:0,6,6:15:239,99,128,143,0,115
-chr21	29441829	chr21:29441829:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,46:47:255,120,0	0/1:23,23:47:255,0,255	0/1:25,25:51:255,0,255
-chr21	29443197	chr21:29443197:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,16:35:194,0,241	0/0:36,0:38:0,111,255	0/1:18,18:38:217,0,236
-chr21	29446397	chr21:29446397:M	AATTAATTAATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:12,20:32:255,0,138	0/0:26,0:26:0,77,255	0/1:15,13:28:162,0,200
-chr21	29450360	chr21:29450360:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:82,0,12	1/1:0,4:5:77,14,0	1/1:0,4:5:70,12,0
-chr21	29451825	chr21:29451825:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,18:33:255,0,219	0/0:21,0:24:0,63,255	0/1:12,19:33:255,0,240
-chr21	29454957	chr21:29454957:M	AAAAATAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,15:32:182,0,218	0/0:27,0:28:0,82,255	0/1:17,25:43:255,0,189
-chr21	29457518	chr21:29457518:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:4,0:6:0,13,123	0/0:0,0:4:0,6,30	1/1:1,12:15:255,11,0
-chr21	29461527	chr21:29461527:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,24:47:255,0,255	0/0:40,0:40:0,118,255	0/1:32,21:54:234,0,255
-chr21	29461666	chr21:29461666:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,3:4:36,0,4	0/1:2,0:3:3,0,24
-chr21	29461842	chr21:29461842:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10:20:129,0,109	0/0:29,1:31:0,73,255	0/1:14,11:27:131,0,185
-chr21	29465939	chr21:29465939:M	TTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,8,3:17:178,2,40,119,0,196	0/2:10,0,5:20:111,132,255,0,247,255	0/1:9,12,0:25:252,0,215,255,255,255
-chr21	29469147	chr21:29469147:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:11:42,0,87	0/1:15,5:20:28,0,200	0/0:17,0:19:0,53,255
-chr21	29469791	chr21:29469791:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:4:25,0,8	0/0:4,0:5:0,14,79	0/1:2,5:8:77,0,10
-chr21	29474442	chr21:29474442:M	CGCGCGCGCGCGC	<5.5>	.	.	Motif=CG	GT:AD:DP:PL	1/1:0,5:5:65,14,0	0/1:1,2:4:14,0,12	1/1:0,1:1:13,3,0
-chr21	29474454	chr21:29474454:M	CACACACACACACACACACACACACACACCACA	<21.5>,<22.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,22:30:255,255,201,93,0,4	2/2:0,3,19:23:255,251,184,68,16,0	1/2:0,9,16:25:255,201,128,116,0,42
-chr21	29476701	chr21:29476701:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,1:2:12,0,5	1/1:1,4:6:63,0,0	1/1:1,9:10:140,12,0
-chr21	29477669	chr21:29477669:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:21:255,44,0	1/1:0,29:29:255,84,0	1/1:1,21:22:255,47,0
-chr21	29480269	chr21:29480269:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,49:49:255,145,0	1/1:0,43:43:255,127,0	1/1:1,49:50:255,129,0
-chr21	29482380	chr21:29482380:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,4:10:255,73,44,110,0,82	1/2:0,5,4:13:255,76,42,113,0,85	1/2:0,9,3:13:255,54,19,161,0,127
-chr21	29485336	chr21:29485336:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:220,27,0	1/1:0,11:13:255,36,0	1/1:0,13:15:255,39,0
-chr21	29497688	chr21:29497688:M	TATATATATATATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,44:47:255,141,0	1/1:0,45:45:255,135,0	1/1:0,52:56:255,165,0
-chr21	29505365	chr21:29505365:M	AAAAAGAAAAAAAAGAAAACAAACAAAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,18:18:255,53,0	1/1:0,26:26:255,77,0
-chr21	29505561	chr21:29505561:M	AAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:5:145,18,3,71,0,57	1/2:0,1,3:6:129,63,49,18,0,4	1/2:0,0,2:3:66,35,26,11,0,4
-chr21	29519863	chr21:29519863:M	TATATATATATAAAATAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7:9:230,24,0	1/1:0,0:2:35,6,0	1/1:0,0:1:1,0,0
-chr21	29540971	chr21:29540971:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:15:255,42,0	1/1:0,23:26:255,75,0	1/1:0,20:24:255,71,0
-chr21	29541576	chr21:29541576:M	TTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:18:255,53,0	1/1:0,8:9:255,27,0	1/1:0,11:14:255,39,0
-chr21	29542033	chr21:29542033:M	GTGTGTGTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,43:47:255,137,0	1/1:0,41:42:255,126,0	1/1:0,36:36:255,108,0
-chr21	29558346	chr21:29558346:M	ATATATATATATATATTTCATATATATAT	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:21,14:35:60,0,136	0/1:8,21:29:149,0,9	0/1:20,19:39:103,0,113
-chr21	29558377	chr21:29558377:M	CACACACACACACACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,41:41:255,121,0	1/1:2,15:17:226,15,0	1/1:3,43:46:255,81,0
-chr21	29570844	chr21:29570844:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:27:255,32,0	1/1:1,22:28:255,50,0	1/1:5,30:35:255,12,0
-chr21	29574684	chr21:29574684:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:64,11,0	1/1:0,1:2:29,6,0	1/1:0,5:5:87,15,0
-chr21	29579956	chr21:29579956:M	TGTGTGTGTGT	<4.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,8:8:148,24,0	1/1:0,1:1:18,3,0	1/1:0,1:1:18,3,0
-chr21	29580488	chr21:29580488:M	TCTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,40:40:255,118,0	1/1:0,55:55:255,162,0
-chr21	29589425	chr21:29589425:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:9,20:29:255,0,72	0/0:15,2:18:0,16,249
-chr21	29591447	chr21:29591447:M	TCTTTTTCTTTTTC	<1.3>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:28,19:47:207,0,255	0/0:45,0:45:0,133,255
-chr21	29594180	chr21:29594180:M	TGTGTATGTGTGTGTGTGTGTGTGTGTATGTG	<14>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:33:0,90,255	0/1:12,16:32:255,0,238	0/0:27,0:28:0,81,255
-chr21	29595341	chr21:29595341:M	TTTTTTTTTTTTTTTTTCTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,4:16:25,0,170	0/1:13,4:17:19,0,173	0/0:18,1:21:0,43,255
-chr21	29606019	chr21:29606019:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:25:0,56,255	0/1:11,10:21:109,0,126	0/0:23,1:25:0,55,255
-chr21	29606665	chr21:29606665:M	AAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/1:8,17:26:255,0,142	0/0:21,0:22:0,66,255
-chr21	29606794	chr21:29606794:M	TCTTGTCTTGTCTTGTCTTGTCTTGT	<4.2>	.	.	Motif=TCTTG	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:17,12:29:133,0,224	0/0:37,0:37:0,109,255
-chr21	29619124	chr21:29619124:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,0,0:7:0,21,196,21,143,124	0/2:5,0,5:11:52,70,205,0,93,65	0/1:7,3,0:11:52,0,173,51,127,152
-chr21	29629195	chr21:29629195:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:28:0,80,255	0/1:7,7:16:71,0,91	0/1:8,17:27:213,0,79
-chr21	29632513	chr21:29632513:M	ACACACACACACACACACACACAC	<7>	.	.	Motif=AC	GT:AD:DP:PL	0/0:39,0:40:0,120,255	0/1:13,15:29:255,0,255	0/0:35,0:36:0,108,255
-chr21	29640162	chr21:29640162:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:18,20:39:250,0,205	0/0:40,0:41:0,120,255
-chr21	29654602	chr21:29654602:M	AAAGAAAGAAGGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAAAG	<13.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:10,9:19:96,0,112	0/0:23,0:24:0,70,255
-chr21	29695437	chr21:29695437:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<9.2>,<10.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,20,0:31:255,91,0,255,85,255	0/1:5,11,0:16:188,0,57,130,42,135	1/2:0,18,14:39:255,116,75,255,0,175
-chr21	29695477	chr21:29695477:M	TATATATATATAT	<4.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,16,15:32:255,255,255,255,0,255	1/2:0,8,7:18:255,177,219,174,0,255	1/2:7,8,23:39:255,255,255,23,0,255
-chr21	29707425	chr21:29707425:M	TCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC	<7.5>,<33.8>	.	.	Motif=TCCC	GT:AD:DP:PL	2/2:0,0,3:3:38,38,38,8,8,0	1/2:0,3,4:7:116,39,30,77,0,66	2/2:0,0,3:3:38,38,38,8,8,0
-chr21	29712084	chr21:29712084:M	ACACACACACACACACACACACACACACACACACACACACA	<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,10,9:21:255,169,145,188,0,162	1/1:0,17,1:22:255,59,0,255,33,255	2/2:0,1,12:18:255,255,255,44,10,0
-chr21	29719075	chr21:29719075:M	TATATACATATATATATATATATATAT	<11.5>,<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,12,15:27:255,255,255,255,0,255	1/1:0,8,0:8:189,24,0,203,24,226	2/2:0,0,25:27:255,255,255,80,81,0
-chr21	29725008	chr21:29725008:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,4:15:26,0,149	0/1:9,4:14:36,0,110	0/1:12,6:19:58,0,150
-chr21	29734346	chr21:29734346:M	CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<9>,<11>,<12>	.	.	Motif=CTTTT	GT:AD:DP:PL	1/2:0,11,11,0:22:255,255,255,255,0,255,255,208,255,255	1/3:0,13,0,7:20:255,187,148,255,125,255,255,0,255,255	2/3:0,0,11,6:17:255,255,255,112,112,63,204,204,0,156
-chr21	29735847	chr21:29735847:M	AAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6:11:227,106,96,48,0,22	2/2:0,2,11:14:255,188,152,39,3,0	1/2:0,3,13:19:255,225,196,56,0,8
-chr21	29736205	chr21:29736205:M	ATTATGATTATGATTATGATTATGATTAT	<3.8>	.	.	Motif=ATTATG	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,40:41:255,120,0	1/1:0,38:38:255,112,0
-chr21	29750217	chr21:29750217:M	CTCCCTCCCTTCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTC	<13>,<16.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:0,3,7:14:202,171,164,39,0,61	1/2:0,2,3:6:92,72,68,25,0,46	1/2:0,6,10:20:255,246,230,78,0,130
-chr21	29765858	chr21:29765858:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:34:0,102,255	0/1:13,12:26:255,0,255	0/0:40,0:40:0,120,255
-chr21	29767865	chr21:29767865:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19,1:20:255,60,0,255,40,255	1/2:0,19,13:33:255,247,149,255,0,237	1/1:0,23,0:23:255,69,0,255,68,255
-chr21	29774447	chr21:29774447:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,5:9:133,58,79,35,0,28	1/2:1,4,3:8:131,26,39,51,0,46	0/2:2,0,6:10:81,80,144,0,38,22
-chr21	29775276	chr21:29775276:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:7:0,3,81	0/1:2,3:5:35,0,18	0/0:4,0:6:0,11,68
-chr21	29779336	chr21:29779336:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGCACGTGTGTGTGTG	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,24:27:255,71,0	1/1:0,17:25:255,59,0	1/1:0,25:29:255,75,0
-chr21	29779495	chr21:29779495:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,38:39:255,115,0	0/1:12,17:33:248,0,119	1/1:1,41:43:255,108,0
-chr21	29782087	chr21:29782087:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,0:18:0,52,255	0/0:12,1:13:0,21,189	0/1:11,4:16:33,0,149
-chr21	29785562	chr21:29785562:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:6:0,1,68	1/1:0,5:6:92,17,0	0/0:4,0:5:0,14,76
-chr21	29796976	chr21:29796976:M	AAAAAAAAAAAAGAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,38:39:255,96,0	1/1:1,32:33:255,79,0	1/1:1,37:39:255,96,0
-chr21	29799497	chr21:29799497:M	TTTGTTTGTTTGTTTGTTTTCATTTGTTTTTTGTTTGTTTGTTTGTTTTTTG	<12>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,19:20:255,59,0	0/1:14,12:26:140,0,177	1/1:0,21:21:255,62,0
-chr21	29810297	chr21:29810297:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28,1:29:255,84,0,255,67,255	1/2:0,20,15:36:255,223,160,255,0,255	1/1:0,39,0:39:255,117,0,255,115,255
-chr21	29813914	chr21:29813914:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,89	0/1:9,8:18:93,0,101	0/0:12,0:12:0,35,210
-chr21	29814091	chr21:29814091:M	ATAAAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/0:19,1:21:0,37,226	0/1:11,5:17:25,0,96	0/1:12,4:18:18,0,106
-chr21	29821058	chr21:29821058:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11:24:132,0,169	0/1:20,11:34:105,0,255	1/1:1,22:26:255,47,0
-chr21	29827976	chr21:29827976:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,11:23:202,0,167	0/1:13,11:25:183,0,224	0/0:21,0:25:0,74,255
-chr21	29828012	chr21:29828012:M	TGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,9:27:51,0,141	0/1:15,9:25:54,0,120	0/0:31,0:32:0,89,255
-chr21	29830308	chr21:29830308:M	CACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACA	<28>,<30>,<31>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,9,1,6:17:255,116,162,255,89,255,255,0,255,255	1/3:0,2,0,5:7:139,85,144,133,85,130,68,0,62,53	2/3:0,0,6,4:10:229,241,255,59,71,41,105,105,0,76
-chr21	29839041	chr21:29839041:M	TTTCTTTTCTTTTCTTTTCTTTTTTTT	<6.4>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:16,25:41:255,0,187	0/1:18,7:25:53,0,252	0/0:32,0:32:0,94,255
-chr21	29847930	chr21:29847930:M	CACACACACACA	<8>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,17:41:255,0,255	0/0:23,1:24:0,48,255	0/1:22,14:38:250,0,255
-chr21	29848049	chr21:29848049:M	TTATTATTATTATTATTATTA	<8>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:16,13:29:166,0,224	0/0:30,0:30:0,88,255	0/1:17,10:27:109,0,241
-chr21	29848756	chr21:29848756:M	TATATATATATATATATATATATAT	<15.5>,<16.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,1,5:14:101,37,164,0,130,133	1/1:0,1,0:1:26,3,0,13,3,11	0/1:7,4,0:11:67,0,154,42,168,202
-chr21	29848780	chr21:29848780:M	TTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,5:14:255,154,132,140,0,115	1/2:0,3,0:6:103,18,6,79,0,76	1/2:0,1,3:7:146,99,89,40,0,26
-chr21	29851057	chr21:29851057:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:37:166,0,255	0/0:22,3:28:0,17,255	0/1:17,17:36:228,0,206
-chr21	29859378	chr21:29859378:M	ATAAAATAAAATGAAATAAAAAAACAAAAAAAAATAAA	<7.8>	.	.	Motif=ATAAA	GT:AD:DP:PL	0/1:11,15:26:82,0,42	0/0:12,0:14:0,35,129	0/1:16,13:30:52,0,90
-chr21	29861308	chr21:29861308:M	TCTTTTTTTTTCTTTT	<3.4>	.	.	Motif=TCTTT	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,30:30:255,90,0	1/1:0,34:34:255,102,0
-chr21	29868026	chr21:29868026:M	AAGGAAGGAAGGAAGGAAGGAAGGGAAGGA	<5.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/0:40,0:40:0,120,255	0/1:22,21:43:255,0,255
-chr21	29871761	chr21:29871761:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3,0:10:153,41,25,77,0,79,145,44,104,199	2/3:0,0,4,4:8:210,169,156,66,66,43,66,55,0,43	0/1:3,5,1,0:9:70,0,25,54,34,129,84,49,147,204
-chr21	29872193	chr21:29872193:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:9:64,0,46	1/1:2,8:12:122,0,0	0/0:6,0:6:0,18,106
-chr21	29875002	chr21:29875002:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,30:34:255,45,0	1/1:0,30:33:255,96,0	1/1:1,34:38:255,71,0
-chr21	29876113	chr21:29876113:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,19,11:31:255,193,106,255,0,255	2/2:0,2,25:27:255,255,255,80,45,0	1/2:0,9,8:17:255,139,90,157,0,109
-chr21	29888133	chr21:29888133:M	CCCTCCCTCCCTCCCTCCCTCC	<33.8>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:11,4:15:5,0,255	0/1:11,4:15:4,0,253	0/0:14,4:18:0,5,255
-chr21	29900084	chr21:29900084:M	AAAAAAAAAAAAAAAAGAAAATAAAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,16:20:255,22,0	1/1:0,21:24:255,69,0	1/1:1,17:22:255,43,0
-chr21	29926106	chr21:29926106:M	AAAAAAAAAAAAAAAA	<13>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,16,10:27:255,162,219,255,0,255	1/2:2,25,12:40:255,172,255,255,0,255	1/1:0,42,0:46:255,135,0,255,135,255
-chr21	29937798	chr21:29937798:M	TTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,15:35:255,255,255,255,0,255	1/2:0,18,26:48:255,255,255,255,0,255	2/2:0,0,23:25:255,255,255,75,75,0
-chr21	29944864	chr21:29944864:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,12:15:183,9,0	1/1:1,20:21:255,45,0	1/1:4,19:25:255,5,0
-chr21	29948120	chr21:29948120:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:42:255,123,0	1/1:1,28:29:255,68,0	1/1:1,35:36:255,88,0
-chr21	29953362	chr21:29953362:M	AAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:114,20,0	0/1:3,4:7:45,0,29	1/1:0,5:7:86,11,0
-chr21	29954739	chr21:29954739:M	TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:1,0,21:22:255,255,255,46,63,0	2/2:2,0,30:32:255,255,255,59,90,0	1/2:0,15,10:25:255,178,210,255,0,255
-chr21	29962870	chr21:29962870:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:10:39,0,61	0/1:2,3:6:34,0,18	0/1:3,5:13:60,0,47
-chr21	29969361	chr21:29969361:M	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<9.5>	.	.	Motif=ATAA	GT:AD:DP:PL	0/1:13,12:25:158,0,177	0/1:6,11:17:149,0,59	0/1:8,12:21:173,0,89
-chr21	29971487	chr21:29971487:M	ATCATCATCAT	<2.7>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,47:47:255,139,0	1/1:0,55:55:255,162,0	1/1:0,46:46:255,136,0
-chr21	29978464	chr21:29978464:M	ATATATATATATATATATA	<12.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,14,0:18:255,36,0,255,53,255	1/1:0,6,0:8:229,24,0,225,24,223	1/2:0,8,3:12:255,104,77,255,0,255
-chr21	29990798	chr21:29990798:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,56:56:255,166,0	1/1:1,42:43:255,109,0	1/1:1,39:40:255,99,0
-chr21	30000683	chr21:30000683:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,89,0	1/1:1,35:37:255,91,0	1/1:2,29:31:255,55,0
-chr21	30006879	chr21:30006879:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:49,1:53:0,137,255	0/0:39,0:40:0,117,255	0/1:10,19:31:255,0,103
-chr21	30008818	chr21:30008818:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:88,15,0	1/1:0,4:5:56,3,0	1/1:1,5:6:69,0,0
-chr21	30009965	chr21:30009965:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,3:38:0,47,255	0/0:31,1:33:0,79,255	0/1:13,14:28:178,0,150
-chr21	30010152	chr21:30010152:M	AAAAAAAAAAAAAAAAAGAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:24:255,71,0	1/1:0,29:34:255,95,0	1/1:0,16:17:255,48,0
-chr21	30017215	chr21:30017215:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:45,0,18	0/1:1,1:3:8,0,20	0/1:2,8:10:108,0,5
-chr21	30020817	chr21:30020817:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:36:255,103,0	1/1:0,21:22:255,64,0	1/1:0,44:45:255,132,0
-chr21	30032208	chr21:30032208:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:1,22:24:255,43,0	1/1:3,29:32:255,40,0
-chr21	30037106	chr21:30037106:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:34:255,96,0	1/1:0,26:29:255,83,0	1/1:0,41:45:255,128,0
-chr21	30038266	chr21:30038266:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,1,2:4:65,16,34,0,10,18	1/2:0,3,1:5:120,16,1,57,0,44	0/2:1,1,4:7:124,57,67,0,9,8
-chr21	30045691	chr21:30045691:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:0,40:41:255,120,0	1/1:0,42:44:255,129,0
-chr21	30046812	chr21:30046812:M	TGTGTATGGGTATGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGT	<9.5>,<10.5>	.	.	Motif=TGTGTA	GT:AD:DP:PL	1/1:0,20,0:20:255,59,0,255,59,255	1/2:0,7,7:14:255,126,86,107,0,86	1/1:0,23,1:24:255,71,0,255,52,255
-chr21	30058533	chr21:30058533:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:16:0,46,255	0/0:19,3:27:0,6,255	0/1:13,7:23:56,0,187
-chr21	30062279	chr21:30062279:M	AAAAATAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAA	<62>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:15:159,0,188	0/1:5,3:8:64,0,122	0/0:7,0:8:0,21,204
-chr21	30088691	chr21:30088691:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:30:0,87,255	0/0:31,0:34:0,96,255	0/1:13,10:25:105,0,179
-chr21	30103334	chr21:30103334:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,3:30:0,26,255	0/1:21,10:33:88,0,255	0/0:40,1:43:0,108,255
-chr21	30106442	chr21:30106442:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:86,19,0	1/1:0,3:3:38,8,0	0/1:1,1:4:23,0,2
-chr21	30128143	chr21:30128143:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,1:14:0,2,156	0/1:5,3:10:42,0,56	0/0:6,1:8:0,6,97
-chr21	30174970	chr21:30174970:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:28:255,27,0	1/1:5,28:36:255,20,0	1/1:3,27:31:255,38,0
-chr21	30191980	chr21:30191980:M	TCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTTGCTCTCTCTCTTTCTCCTCTC	<32>	.	.	Motif=TC	GT:AD:DP:PL	0/1:10,8:20:172,0,215	0/1:10,5:15:91,0,227	0/1:8,7:16:149,0,175
-chr21	30205795	chr21:30205795:M	TTTTTCTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,10:21:128,0,119	0/1:10,12:23:148,0,103	0/1:10,12:25:157,0,114
-chr21	30217900	chr21:30217900:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<29>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7,0:8:106,6,0,128,24,219	1/2:0,3,3:8:139,90,78,58,0,75	1/1:0,4,0:6:93,17,0,104,17,138
-chr21	30219685	chr21:30219685:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,32,186	0/1:5,9:14:112,0,44	0/0:17,0:19:0,53,255
-chr21	30226492	chr21:30226492:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:3:81,9,0	.
-chr21	30231682	chr21:30231682:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,2:43:0,89,255	0/1:15,18:33:224,0,171	0/0:25,1:26:0,58,255
-chr21	30235160	chr21:30235160:M	TTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:41:0,121,255	0/0:30,0:37:0,108,255	0/1:10,13:26:255,0,218
-chr21	30237551	chr21:30237551:M	TTTCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTCT	<12>,<12.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/0:13,0,0:13:0,39,255,39,255,254	0/1:6,5,0:11:113,0,144,131,108,223	0/2:3,0,9:13:132,168,255,0,66,31
-chr21	30241248	chr21:30241248:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:21,17:38:255,0,255	0/0:35,0:35:0,105,255
-chr21	30254274	chr21:30254274:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:20:0,57,255	0/1:14,15:33:255,0,255	0/0:17,0:21:0,53,255
-chr21	30268072	chr21:30268072:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:6:71,0,0	0/1:2,6:9:77,0,10	1/1:0,2:2:34,6,0
-chr21	30271040	chr21:30271040:M	AAACAAAACAAAAACAACAACAACAACAAAAAAAAA	<5.8>	.	.	Motif=AAACAA	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:13,20:33:255,0,180	0/0:32,0:32:0,95,255
-chr21	30279336	chr21:30279336:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,54:54:255,255,255,160,160,0	1/2:0,28,33:61:255,255,255,255,0,255	2/2:0,1,52:53:255,255,255,156,138,0
-chr21	30279861	chr21:30279861:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,4:16:18,0,148	0/1:9,2:13:8,0,106	0/0:15,2:17:0,17,208
-chr21	30280874	chr21:30280874:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:19:0,19,253	0/1:15,8:25:85,0,184	0/0:21,0:25:0,69,255
-chr21	30292509	chr21:30292509:M	AAAAAAATAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/1:14,19:33:240,0,152	0/0:36,1:37:0,91,255
-chr21	30297067	chr21:30297067:M	TGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGCGTGTGTGTGTGT	<31.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:3,6:9:78,0,26	0/0:14,0:14:0,41,252
-chr21	30304472	chr21:30304472:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:15:0,44,254	0/1:11,9:22:89,0,133	0/0:11,0:13:0,35,199
-chr21	30313592	chr21:30313592:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:157,15,0	0/1:11,8:20:75,0,135	1/1:0,15:15:255,44,0
-chr21	30322393	chr21:30322393:M	GTGTGTGTGTG	<7.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:15,0:17:0,51,255	0/1:4,8:13:146,0,66	0/0:13,0:13:0,39,255
-chr21	30322403	chr21:30322403:M	GGGGGGGGGGGGGCGGTGGGGGGG	<23>,<25>	.	.	Motif=G	GT:AD:DP:PL	0/2:4,0,5:9:44,69,152,0,45,30	1/2:0,7,3:11:105,38,41,92,0,140	1/2:0,1,3:5:43,40,62,13,0,12
-chr21	30333520	chr21:30333520:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,20,197	1/1:0,6:7:103,18,0	0/0:8,0:10:0,26,149
-chr21	30334488	chr21:30334488:M	ATAGATAGATAGATGATAGATGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<15.5>,<15.8>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:5,14,0:19:255,0,87,190,127,255	1/2:0,11,7:18:255,98,45,152,0,100	0/1:8,10,0:18:230,0,174,135,205,255
-chr21	30334616	chr21:30334616:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/1:10,6:17:131,0,249	0/0:25,0:27:0,81,255
-chr21	30337984	chr21:30337984:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:35:0,79,255	0/1:14,7:22:58,0,178	0/0:36,0:39:0,113,255
-chr21	30341737	chr21:30341737:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:35:122,0,255	1/1:4,21:26:255,7,0	0/1:23,7:31:33,0,255
-chr21	30346402	chr21:30346402:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/1:13,12:25:140,0,157	0/0:23,0:23:0,68,255
-chr21	30347297	chr21:30347297:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:39:0,77,255	0/1:22,16:42:179,0,255	0/0:40,0:44:0,128,255
-chr21	30351716	chr21:30351716:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTA	<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:17,0:18:0,50,255	0/1:8,9:17:114,0,95	0/0:22,0:22:0,65,255
-chr21	30356359	chr21:30356359:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:33:0,96,255	0/1:23,15:38:147,0,255	0/0:34,0:34:0,100,255
-chr21	30362723	chr21:30362723:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:27:209,0,125	1/1:1,29:32:255,76,0	0/1:14,19:34:246,0,163
-chr21	30367276	chr21:30367276:M	TTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:31:0,92,255	0/1:8,12:22:255,0,166	0/0:22,0:24:0,71,255
-chr21	30367585	chr21:30367585:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,41:41:255,121,0	1/1:0,26:26:255,77,0
-chr21	30388523	chr21:30388523:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,30:31:255,73,0	1/1:1,40:41:255,102,0
-chr21	30388644	chr21:30388644:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,12:15:255,42,0	1/1:0,15:16:255,48,0
-chr21	30390184	chr21:30390184:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:95,6,0	1/1:0,2:2:33,6,0	0/1:0,1:3:19,0,3
-chr21	30393447	chr21:30393447:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,66,0	1/1:1,30:39:255,74,0	1/1:0,34:38:255,102,0
-chr21	30394202	chr21:30394202:M	TTTTTTTTTTTTTTTTTTTTTTTT	<18>,<25>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:32,38,59,6,6,0	0/2:3,0,3:6:29,46,153,0,47,29	1/2:0,5,2:9:181,31,31,155,0,149
-chr21	30394756	chr21:30394756:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,43:44:255,129,0	1/1:1,41:43:255,108,0
-chr21	30403976	chr21:30403976:M	TTTTTCGTTTTCTTTTTCTTTTTTTTT	<4.7>	.	.	Motif=TTTTTC	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,30:30:255,90,0	1/1:0,20:20:255,60,0
-chr21	30404948	chr21:30404948:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:8:95,5,0	1/1:0,6:6:102,18,0	1/1:0,8:8:140,23,0
-chr21	30405493	chr21:30405493:M	TTTATTTTTATTATTTATTTTTATTTTTTATTTTTATTTTT	<4.7>	.	.	Motif=TTTATT	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,27:27:255,81,0	1/1:0,36:36:255,108,0
-chr21	30410757	chr21:30410757:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,11:13:191,20,0	1/1:0,5:7:108,20,0	1/1:1,19:22:255,44,0
-chr21	30411772	chr21:30411772:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:25:148,0,139	0/0:28,2:32:0,54,255	0/1:14,14:29:157,0,172
-chr21	30420803	chr21:30420803:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:4,0,107	0/1:3,3:6:31,0,32	0/1:5,7:13:79,0,55
-chr21	30449424	chr21:30449424:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<25>	.	.	Motif=CT	GT:AD:DP:PL	0/0:5,0:8:0,20,109	0/0:1,0:1:0,3,17	0/1:1,5:8:64,0,7
-chr21	30452826	chr21:30452826:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:32:255,56,0	0/1:15,20:39:152,0,88	1/1:1,42:51:255,51,0
-chr21	30461491	chr21:30461491:M	AAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,11:14:255,255,255,41,41,0	1/2:1,11,5:17:255,109,91,168,0,255	2/2:0,0,12:13:255,255,255,39,39,0
-chr21	30466481	chr21:30466481:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<20.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:2,0,9,11:22:255,255,255,255,255,255,122,255,0,246	1/3:0,16,0,7:24:255,195,144,255,195,255,255,0,255,255	2/3:2,0,5,7:14:224,244,255,158,193,172,51,159,0,138
-chr21	30482218	chr21:30482218:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,17,19:38:255,255,255,252,0,218	0/2:22,1,11:36:224,182,255,0,255,255	0/1:9,36,0:46:255,0,40,255,170,255
-chr21	30483959	chr21:30483959:M	TATATATATATATATGTATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	0/0:16,0:16:0,46,255	0/1:5,12:17:138,0,29	0/0:28,0:28:0,81,255
-chr21	30483978	chr21:30483978:M	AGAGAGAGAGAGAGAGAGA	<12.5>,<14.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,15,13:30:255,255,255,255,0,255	0/2:13,1,9:24:195,201,255,0,255,255	1/2:0,13,9:23:255,242,195,255,0,255
-chr21	30489116	chr21:30489116:M	ACACATACACACACACACACACACACACACAC	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:13,12:26:139,0,156	1/1:0,25:25:255,74,0
-chr21	30492859	chr21:30492859:M	TTTTCTTTTCTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25,0:25:255,75,0,255,74,255	1/2:0,13,14:28:255,208,167,238,0,161	1/1:0,26,2:28:255,78,0,255,46,255
-chr21	30494709	chr21:30494709:M	AAAAAAAAAAAAAAGAAAAAAAAAAGAAAAGAAAAGAAAA	<35>,<39>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6,0:6:172,18,0,172,18,172	1/2:2,9,6:17:255,67,140,194,0,204	1/1:0,9,0:10:255,30,0,255,30,255
-chr21	30498212	chr21:30498212:M	GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,16,0:18:255,51,0,255,51,255	1/2:0,8,9:19:255,232,198,219,0,184	1/1:0,23,0:23:255,69,0,255,69,255
-chr21	30507160	chr21:30507160:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,49:50:255,129,0	0/1:23,27:52:255,0,255	1/1:0,42:42:255,124,0
-chr21	30522235	chr21:30522235:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:12,1:13:0,23,140	0/0:8,1:9:0,12,87	0/1:7,6:13:40,0,52
-chr21	30522251	chr21:30522251:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:104,12,0	0/1:4,2:6:33,0,85	0/1:1,7:8:154,0,2
-chr21	30522265	chr21:30522265:M	ATATATATATATATACATATATATATATA	<17.5>,<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,12:23:255,166,98,111,0,42	1/2:0,1,2:3:105,24,15,12,0,3	1/2:0,8,6:18:255,113,63,97,0,44
-chr21	30524108	chr21:30524108:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,97,0	0/1:19,23:42:255,0,214	1/1:1,43:44:255,111,0
-chr21	30524233	chr21:30524233:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:4,22:27:255,9,0	1/1:3,33:38:255,47,0
-chr21	30533037	chr21:30533037:M	GTTTTGTTTTTGTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<12.2>,<13.2>	.	.	Motif=GTTTT	GT:AD:DP:PL	1/2:0,5,6:11:238,114,84,83,0,65	0/2:9,0,6:16:128,107,230,0,162,215	1/1:0,9,0:9:171,27,0,171,27,171
-chr21	30552729	chr21:30552729:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<29.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:7:32,0,49	0/1:6,3:10:21,0,81	0/1:3,5:9:60,0,35
-chr21	30558067	chr21:30558067:M	TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:70,12,0	0/1:2,7:10:91,0,7	1/1:0,6:6:102,18,0
-chr21	30562374	chr21:30562374:M	TATATATATATATATATGTATATATATATATATACATGTATGTATGTATATATA	<33.8>	.	.	Motif=TATA	GT:AD:DP:PL	1/1:0,3:7:44,9,0	.	0/0:0,0:2:0,0,0
-chr21	30576984	chr21:30576984:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,40:40:255,118,0	1/1:0,40:40:255,118,0
-chr21	30621612	chr21:30621612:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:30:255,60,0	1/1:3,23:28:255,30,0	0/1:8,26:35:255,0,40
-chr21	30623886	chr21:30623886:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:213,24,0	1/1:0,7:9:220,27,0	1/1:0,2:3:67,9,0
-chr21	30626625	chr21:30626625:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:31:255,54,0	1/1:2,26:29:255,50,0	1/1:0,22:23:255,67,0
-chr21	30632675	chr21:30632675:M	AAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:69,9,0	1/1:0,5:6:157,18,0	1/1:0,1:1:29,3,0
-chr21	30650305	chr21:30650305:M	TTTTTTTTTCTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:242,27,0	1/1:0,12:12:255,36,0	1/1:0,13:14:255,39,0
-chr21	30656424	chr21:30656424:M	AAAAAAAAAAAAAAAAAGAAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:17:255,49,0	1/1:1,14:16:221,27,0	1/1:0,20:20:255,59,0
-chr21	30683970	chr21:30683970:M	AAAAAAAAAAGAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,2:23:0,3,255	1/1:0,6:7:158,18,0	0/1:13,4:17:57,0,255
-chr21	30690894	chr21:30690894:M	AAAAAAAAATGAAAAGAAAAGAAAA	<4.8>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:20,19:39:255,0,255	1/1:0,36:36:255,108,0	0/1:18,20:38:255,0,255
-chr21	30695589	chr21:30695589:M	CAAACAAACAAACAAACAAAC	<6.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:20,23:43:255,0,255	1/1:1,32:33:255,79,0	0/1:14,15:29:197,0,178
-chr21	30701769	chr21:30701769:M	TGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGT	<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,9,0:19:200,0,227,163,255,255	1/2:0,9,6:15:255,104,61,156,0,114	0/1:20,7,0:30:116,0,255,130,255,255
-chr21	30705468	chr21:30705468:M	GTTTTTTGTTTGTTTTTTGTTTGTTT	<5.5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:19,19:38:226,0,226	1/1:0,40:40:255,117,0	0/1:22,18:42:196,0,255
-chr21	30707314	chr21:30707314:M	AAAACAAAACAAAACAAA	<4.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:17,21:38:255,0,217	1/1:0,39:39:255,115,0	0/1:16,15:31:191,0,210
-chr21	30713016	chr21:30713016:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:23:255,0,182	1/1:0,34:35:255,105,0	0/1:9,15:25:255,0,166
-chr21	30715751	chr21:30715751:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,1:7:0,2,80	1/1:0,7:7:118,20,0	0/1:3,1:4:5,0,40
-chr21	30716787	chr21:30716787:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,20,177	0/1:9,3:14:10,0,130	0/1:8,3:11:20,0,106
-chr21	30717762	chr21:30717762:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,9,0:23:196,0,255,163,255,255	1/2:0,12,11:23:255,191,125,208,0,142	0/1:9,13,0:25:255,0,207,244,250,255
-chr21	30725133	chr21:30725133:M	ACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:20,0:24:0,63,255	0/1:14,11:38:203,0,255	0/0:28,0:28:0,84,255
-chr21	30727925	chr21:30727925:M	AAGAAGAAAAGAGAGAAGAAG	<6.3>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:21,20:41:255,0,255	1/1:0,40:40:255,120,0	0/1:17,23:40:255,0,255
-chr21	30731863	chr21:30731863:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,23:47:255,0,255	1/1:0,49:49:255,144,0	0/1:25,31:56:255,0,255
-chr21	30752614	chr21:30752614:M	ACACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:9,0:10:0,30,255	0/1:11,6:22:108,0,255	0/0:7,0:9:0,26,228
-chr21	30755257	chr21:30755257:M	CCACAGCCATACCCACAGCCATAGCCAGTTCCATAGCCACAGCCACAGCCAGAGCCAGAGCCATAGCCACAGCCACAGCCGGAGCCATAGCCACAG	<14>	.	.	Motif=CCACAG	GT:AD:DP:PL	1/1:0,4:4:101,12,0	1/1:0,1:1:25,3,0	1/1:0,5:5:125,15,0
-chr21	30763383	chr21:30763383:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:27:127,136,255,0,218,169	0/1:8,16,1:27:255,0,186,255,131,255	0/2:6,2,8:17:119,67,222,0,55,55
-chr21	30767367	chr21:30767367:M	ACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:2,16:18:254,17,0	1/1:2,23:25:255,39,0	1/1:2,16:18:248,17,0
-chr21	30768842	chr21:30768842:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,21:27:255,39,0	1/1:1,18:21:255,44,0	1/1:2,16:19:252,20,0
-chr21	30799212	chr21:30799212:M	AAAAAAAAAAAAAAAAAAAAGAATAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:6:110,15,0	1/1:0,1:2:27,3,0	1/1:0,2:3:55,6,0
-chr21	30800786	chr21:30800786:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,7:7:127,21,0	1/1:0,19:19:255,56,0
-chr21	30803046	chr21:30803046:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,63,0	1/1:0,17:17:255,51,0	1/1:0,10:14:255,33,0
-chr21	30805071	chr21:30805071:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:14:173,4,0	1/1:2,15:18:235,17,0	1/1:0,13:13:233,38,0
-chr21	30806882	chr21:30806882:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,12:34:125,0,255	1/1:2,26:29:255,50,0	0/1:24,11:36:95,0,255
-chr21	30807296	chr21:30807296:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,5,39:44:255,255,255,131,39,0	1/2:0,17,17:36:255,255,210,255,0,188	2/2:0,2,33:36:255,255,255,105,59,0
-chr21	30813491	chr21:30813491:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:169,0,226	0/1:20,17:37:191,0,244	0/1:15,15:30:185,0,185
-chr21	30816279	chr21:30816279:M	CACACACACACACACACACACACACACACACACACACACACACACACA	<21>,<22>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,5,4,0:11:248,64,33,99,0,71,210,53,98,195	1/3:0,9,0,5:17:255,76,88,210,74,183,236,0,146,213	2/2:0,2,17,1:20:255,255,249,57,26,0,255,230,42,255
-chr21	30818841	chr21:30818841:M	AAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20,1:44:255,0,255,255,255,255	0/2:19,0,14:36:255,243,255,0,255,255	0/1:21,6,2:31:99,0,255,70,255,255
-chr21	30820551	chr21:30820551:M	TGGTGGTGGTGCTGGTGGTGATGGTGGTGGTGTTGGT	<13.3>	.	.	Motif=TGG	GT:AD:DP:PL	0/1:11,24:35:184,0,33	0/1:10,13:23:86,0,52	0/1:10,9:19:52,0,64
-chr21	30821072	chr21:30821072:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,27:46:255,0,206	0/1:16,18:34:223,0,187	0/1:23,17:41:195,0,255
-chr21	30824991	chr21:30824991:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,8:20:255,145,169,218,0,255	1/2:2,11,6:20:221,73,116,168,0,255	1/2:0,11,7:19:255,131,152,195,0,255
-chr21	30826652	chr21:30826652:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGATGATAGATACATAGATACATACATAGGTAGATAGATGATAGA	<16.8>,<17.8>	.	.	Motif=GATA	GT:AD:DP:PL	1/2:0,1,1:3:72,12,3,18,0,10	1/1:0,3,0:4:113,9,0,39,7,29	1/2:0,1,3:6:152,33,16,27,0,11
-chr21	30834204	chr21:30834204:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<10.2>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,21:21:255,63,0	1/1:0,15:15:255,45,0
-chr21	30835514	chr21:30835514:M	GAATGAATGAATGAATGAATGAATGAATGAAATGAATGAAT	<12.2>,<13.2>	.	.	Motif=GAAT	GT:AD:DP:PL	1/2:0,11,11:22:255,211,150,211,0,149	1/2:0,9,13:22:255,235,173,163,0,100	2/2:0,0,21:21:255,255,255,63,62,0
-chr21	30841846	chr21:30841846:M	AAAAAAAAAAAAAAAAATTAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:12:182,0,1	1/1:0,1:3:27,3,0	1/1:0,3:7:82,9,0
-chr21	30841882	chr21:30841882:M	AACAACAACAACAACAA	<7.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,20:23:255,30,0	1/1:0,7:8:176,5,0	1/1:1,17:19:255,30,0
-chr21	30842198	chr21:30842198:M	AAAAAAAAAAAACCAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:20:255,40,0	1/1:0,17:17:255,50,0	1/1:1,21:23:255,50,0
-chr21	30847416	chr21:30847416:M	AAAAAAAAAAAATAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:2,28:31:255,55,0	1/1:0,40:40:255,118,0
-chr21	30849697	chr21:30849697:M	CACACACACACACACGCGCGCGCGCACACACACACACACACAC	<23.5>,<33.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,6:8:210,210,210,24,24,0	1/2:0,10,1:14:255,45,15,255,0,255	2/2:0,0,4:5:139,139,139,15,15,0
-chr21	30851142	chr21:30851142:M	ATATATATATATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:6:61,12,0	0/0:0,0:3:0,3,8	.
-chr21	30851163	chr21:30851163:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:78,2,0	1/1:0,1:2:33,5,0	0/1:0,2:3:45,0,3
-chr21	30866162	chr21:30866162:M	ACACACACACACACACACACACACACACACACACACACACA	<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,35,0:36:255,108,0,255,108,255	1/2:0,14,8:23:255,142,177,255,0,255	1/1:0,28,0:29:255,87,0,255,87,255
-chr21	30867730	chr21:30867730:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,8:13:195,97,110,51,0,31	1/2:0,1,1:6:49,14,8,26,0,19	1/2:0,1,1:2:38,14,11,16,0,11
-chr21	30869146	chr21:30869146:M	ATATATATACATATATGTGTATATATATATATATATATATATATAT	<21>,<22>	.	.	Motif=AT	GT:AD:DP:PL	0/2:4,0,5:14:65,77,184,0,72,46	0/0:2,0,0:4:0,11,81,11,62,56	1/2:0,5,6:12:246,90,75,90,0,58
-chr21	30869384	chr21:30869384:M	TGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,3:6:160,38,20,38,0,20	0/0:0,0,0:1:0,3,10,3,12,15	2/2:0,0,2:2:60,30,24,6,6,0
-chr21	30869398	chr21:30869398:M	TATATATATATATATATATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:5:53,13,0	.	1/1:0,1:1:11,3,0
-chr21	30870909	chr21:30870909:M	ACACACACACACACACACACACACACACACAC	<17>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22,1:24:255,68,0,255,41,255	1/2:0,14,13:32:255,255,255,233,0,255	1/1:3,32,3:38:255,54,0,255,30,255
-chr21	30871225	chr21:30871225:M	AAAAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:153,16,0	1/1:0,3:5:102,12,0	1/1:0,1:3:55,9,0
-chr21	30872688	chr21:30872688:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,13:15:255,255,229,42,26,0	2/2:0,1,9:10:254,165,138,27,12,0	1/2:3,10,9:22:255,105,96,97,0,145
-chr21	30876230	chr21:30876230:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:227,40,0	0/1:7,9:16:104,0,71	1/1:2,11:13:156,4,0
-chr21	30879280	chr21:30879280:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:5,33:39:255,13,0	1/1:4,28:36:255,24,0	1/1:0,31:31:255,91,0
-chr21	30888116	chr21:30888116:M	CACACACACACACACACACACACAC	<9.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:25,0:26:0,65,255	0/1:21,17:39:255,0,255	0/0:30,0:32:0,96,255
-chr21	30921538	chr21:30921538:M	AAAAAAAAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,0:36:0,103,255	0/1:22,19:42:221,0,255	0/0:35,1:36:0,88,255
-chr21	30935715	chr21:30935715:M	GGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:8,10:18:128,0,92	1/1:2,11:13:155,4,0	0/1:10,15:25:192,0,104
-chr21	30943175	chr21:30943175:M	TATAAATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,17:17:255,50,0	1/1:0,27:27:255,80,0
-chr21	30957610	chr21:30957610:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:16:255,47,0	1/1:0,21:21:255,63,0	1/1:0,26:32:255,84,0
-chr21	30958092	chr21:30958092:M	ACACACACACACACACACACACACACACACACACACACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:26:255,77,0	1/1:0,19:20:255,60,0	1/1:0,22:26:255,77,0
-chr21	30958483	chr21:30958483:M	GTGTGTGTGTGTGTGTGTGTGTGTTTGTG	<17.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,14:28:255,255,255,255,0,255	1/1:0,33,0:35:255,93,0,255,103,255	1/2:0,11,2:13:255,54,19,255,0,255
-chr21	30959343	chr21:30959343:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:0,5:6:140,15,0	1/1:0,3:4:86,9,0
-chr21	30959443	chr21:30959443:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,87,0	1/1:2,29:33:255,61,0	1/1:4,39:44:255,57,0
-chr21	30968763	chr21:30968763:M	AAAAAAAAAACAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,66,0	1/1:0,27:28:255,82,0	1/1:1,19:21:255,44,0
-chr21	30968939	chr21:30968939:M	GAAAGAGAGAGAGAAAGAAGGAAAGAAAGGAAGGAAAGAA	<7>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:13,3:19:55,0,243	0/0:8,1:10:0,1,156	0/1:9,4:14:62,0,166
-chr21	30974558	chr21:30974558:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:1,29:32:255,76,0	1/1:2,30:32:255,58,0
-chr21	30974987	chr21:30974987:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,17:21:255,7,0	1/1:3,17:22:255,12,0	1/1:1,12:14:193,20,0
-chr21	30977846	chr21:30977846:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:7:89,3,0	1/1:0,3:4:60,11,0	1/1:0,7:7:123,21,0
-chr21	30987664	chr21:30987664:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:8:56,0,28	1/1:0,6:8:120,23,0	0/1:7,3:11:18,0,96
-chr21	30993252	chr21:30993252:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,38:41:255,72,0	1/1:0,34:34:255,102,0	1/1:0,33:33:255,99,0
-chr21	30993277	chr21:30993277:M	TATATATATGTGTATATATAT	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:42,14:59:114,0,255	0/1:20,17:37:209,0,255	0/1:34,14:48:123,0,255
-chr21	30993334	chr21:30993334:M	ACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,25:29:255,56,0	1/1:4,37:42:255,33,0	1/1:1,30:36:255,70,0
-chr21	30999071	chr21:30999071:M	TTTTATTTTATCGTATTTTATTTTATTTTATTTTATTTTA	<9>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:15,8:23:86,0,222	0/1:15,13:28:153,0,190	0/1:11,13:24:173,0,136
-chr21	31009121	chr21:31009121:M	TTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:83,9,0	1/1:0,3:4:81,9,0	1/1:0,2:2:68,6,0
-chr21	31010336	chr21:31010336:M	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	<6.8>	.	.	Motif=AGGA	GT:AD:DP:PL	1/1:0,0:1:0,0,0	1/1:0,6:6:74,17,0	1/1:0,2:4:45,11,0
-chr21	31011348	chr21:31011348:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:206,35,0	1/1:2,18:20:255,25,0	1/1:2,14:17:219,15,0
-chr21	31029267	chr21:31029267:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:11,0,53	0/1:2,4:7:47,0,24	0/0:14,1:16:0,29,234
-chr21	31029387	chr21:31029387:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,21:32:255,0,112	0/1:16,15:31:175,0,192	0/0:29,2:31:0,55,255
-chr21	31029688	chr21:31029688:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:171,17,0	1/1:0,26:28:255,81,0	1/1:1,23:25:255,55,0
-chr21	31042646	chr21:31042646:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,17:36:255,0,255	0/1:14,9:25:147,0,244	1/1:3,25:31:255,16,0
-chr21	31046279	chr21:31046279:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:124,21,0	1/1:0,7:9:119,21,0	1/1:0,11:12:201,35,0
-chr21	31050234	chr21:31050234:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:6:131,61,46,27,0,11	1/2:0,2,3:6:146,58,43,33,0,16	1/2:0,3,0:5:104,19,9,50,0,36
-chr21	31054015	chr21:31054015:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:30:255,51,0	1/1:0,14:18:255,45,0	1/1:0,15:16:255,45,0
-chr21	31055973	chr21:31055973:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,2,20:22:255,255,255,66,29,0	1/2:0,7,10:20:255,175,118,134,0,78	1/2:0,13,11:24:255,192,123,226,0,158
-chr21	31061692	chr21:31061692:M	AAAAAAAAAAAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:18:238,33,0	0/1:8,10:22:102,0,71	1/1:1,18:20:255,39,0
-chr21	31064059	chr21:31064059:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:15:255,44,0	1/1:0,4:6:128,17,0	1/1:0,13:14:255,42,0
-chr21	31069176	chr21:31069176:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	.	0/1:9,3:12:11,0,103	0/0:0,0:1:0,0,0
-chr21	31073487	chr21:31073487:M	AAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,55,0:55:255,165,0,255,165,255	1/2:0,24,15:40:255,255,255,255,0,255	1/1:0,49,0:52:255,153,0,255,150,255
-chr21	31074222	chr21:31074222:M	CACAAACACACACACACACACACACACACACACACACAAACACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,16,1:21:255,61,0,255,42,255	1/2:0,9,7:16:255,116,69,149,0,102	1/1:0,22,0:23:255,67,0,255,65,255
-chr21	31077721	chr21:31077721:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:25:0,55,255	0/1:7,9:19:120,0,75	0/0:22,0:26:0,73,255
-chr21	31082605	chr21:31082605:M	AAAAAAAAAAAAAAGAAAAGAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,8:20:88,0,162	0/1:10,12:23:145,0,109	0/0:18,2:20:0,23,255
-chr21	31086494	chr21:31086494:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<24.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,1:1:35,3,0	1/1:0,3:6:108,9,0	0/0:0,0:2:0,3,21
-chr21	31089047	chr21:31089047:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,6:21:57,0,194	0/1:18,6:27:37,0,253	0/0:16,3:20:0,5,241
-chr21	31089419	chr21:31089419:M	TATATATATAT	<7>,<7.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,4:8:173,37,14,37,0,14	0/2:0,1,1:3:30,0,9,0,6,12	1/1:0,3,1:4:83,12,0,28,1,16
-chr21	31089429	chr21:31089429:M	TTTTTTTTTATTTATTTTTTTTTTTT	<25>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,10,14:27:255,255,255,92,0,255	1/2:0,5,12:17:255,255,255,63,0,104	0/2:5,0,21:28:255,255,255,0,66,39
-chr21	31091878	chr21:31091878:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:5:15,0,32	0/1:2,1:5:17,0,22	0/1:6,3:9:26,0,78
-chr21	31097880	chr21:31097880:M	TTTTTTTTATTTTTTTTTATTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,7:23:67,0,240	0/1:10,18:28:243,0,99	0/0:33,0:33:0,97,255
-chr21	31112362	chr21:31112362:M	TATATATATATATATATATATATATA	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4:7:170,17,0	0/0:0,0:2:0,3,17	0/0:6,0:8:0,24,223
-chr21	31112387	chr21:31112387:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:6,2:9:0,5,39	0/0:2,0:3:0,6,18	0/1:9,4:14:7,0,40
-chr21	31119471	chr21:31119471:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:1,37:41:255,99,0	0/1:14,27:43:255,0,132
-chr21	31119812	chr21:31119812:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,35:38:255,56,0	1/1:3,37:41:255,57,0	0/1:35,16:52:151,0,255
-chr21	31127413	chr21:31127413:M	TTTTTTTTTTTTTTTTTCTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:20:86,0,150	0/1:6,14:22:187,0,50	0/1:10,5:17:47,0,139
-chr21	31135651	chr21:31135651:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,82,0	0/1:13,16:30:195,0,152	0/1:16,16:32:198,0,198
-chr21	31142631	chr21:31142631:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAAGAAAAAGAAAAAGAAAAAAAA	<47>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:10:181,0,24	1/1:0,10:10:255,30,0	0/0:7,0:7:0,21,184
-chr21	31143440	chr21:31143440:M	TATATATAATTTTTATATATATATATA	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:11,10:21:116,0,134	0/0:34,0:34:0,100,255
-chr21	31144831	chr21:31144831:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,8:9:123,9,0	1/1:0,4:4:67,12,0	0/0:1,0:1:0,3,17
-chr21	31146711	chr21:31146711:M	AAAAAAAAAAAAAATGAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,18:22:255,10,0	1/1:3,17:20:239,7,0	0/1:7,9:16:112,0,77
-chr21	31148951	chr21:31148951:M	TTTTTCTTTTTCTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,23:30:255,0,36	0/1:8,25:33:255,0,107	0/1:21,26:47:255,0,255
-chr21	31152022	chr21:31152022:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,1:5:119,26,14,91,0,86	1/2:0,3,2:7:159,55,39,92,0,81	1/2:0,0,3:6:129,89,78,23,0,9
-chr21	31153713	chr21:31153713:M	ATATATATATATATATA	<6.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:26,21,0:47:255,0,255,255,255,255	1/2:1,17,9:27:255,143,212,255,0,255	0/2:21,0,21:42:255,255,255,0,255,255
-chr21	31154062	chr21:31154062:M	AAAAAAACAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:32:176,0,252	0/1:18,20:38:251,0,214	0/0:36,0:37:0,109,255
-chr21	31161036	chr21:31161036:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:20:255,60,0,255,60,255	1/1:0,13,1:19:255,27,0,255,1,255	1/2:0,7,6:15:255,158,151,191,0,173
-chr21	31173503	chr21:31173503:M	AAAGCAAGAAAGAAAGAGAGAGCGAGAGAAAGAGAGAGAGAGAGAGAGAGAAAAGAAAAGAAAGAAAGAAAG	<19>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:6,4:10:44,0,81	0/1:7,2:9:9,0,96	0/0:9,0:9:0,26,163
-chr21	31179547	chr21:31179547:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,1:41:0,101,255	0/1:15,9:27:98,0,193	0/0:38,2:43:0,89,255
-chr21	31179903	chr21:31179903:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,18,144	0/1:1,6:7:140,0,6	0/0:5,0:6:0,15,135
-chr21	31180522	chr21:31180522:M	TTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:36:0,107,255	0/1:18,21:41:255,0,255	0/0:34,0:34:0,102,255
-chr21	31181738	chr21:31181738:M	CTTCTTCTTCTTCTTCTTCTT	<6.3>,<7.3>	.	.	Motif=CTT	GT:AD:DP:PL	0/1:7,4,0:11:71,0,150,58,98,128	0/2:5,0,4:9:31,47,164,0,71,46	1/1:0,7,0:7:181,21,0,123,20,105
-chr21	31183697	chr21:31183697:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,2:29:0,48,255	0/0:21,0:23:0,67,255	0/1:10,5:15:44,0,133
-chr21	31196299	chr21:31196299:M	TTTTCTTTTCTTTTTTCTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:16,0:16:0,47,255	0/1:10,8:20:86,0,141
-chr21	31199533	chr21:31199533:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:25:0,55,255	0/1:9,12:23:160,0,89	0/0:19,2:22:0,28,255
-chr21	31199911	chr21:31199911:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,2:35:0,66,255	0/0:34,3:41:0,67,255	0/1:17,16:34:183,0,210
-chr21	31202389	chr21:31202389:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:12,20:34:251,0,130	0/0:29,0:31:0,90,255
-chr21	31215562	chr21:31215562:M	AAAAAAGAAAAAAAAAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:9,0,20	0/1:1,3:5:47,0,2	0/0:5,0:8:0,21,110
-chr21	31222677	chr21:31222677:M	ATATATATATATATATATATATATATATATAT	<16.5>,<18.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:6,2,3:11:38,36,44,0,17,138	0/0:2,0,0:4:0,5,14,9,23,69	1/2:0,3,1:6:15,7,5,7,0,67
-chr21	31225657	chr21:31225657:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:31:0,55,255	0/1:13,11:26:120,0,154	0/0:26,1:27:0,62,255
-chr21	31226953	chr21:31226953:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:2:0,6,53	0/1:1,3:5:76,0,12	0/0:2,0:2:0,6,53
-chr21	31228078	chr21:31228078:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,3:25:0,15,255	0/1:7,11:19:146,0,66	0/0:17,3:21:0,7,255
-chr21	31228221	chr21:31228221:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,4:7:39,5,0	.	.
-chr21	31232014	chr21:31232014:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,73,255	0/1:16,17:34:200,0,193	0/0:34,0:36:0,105,255
-chr21	31242861	chr21:31242861:M	AAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:3,0,51	0/0:0,0:2:0,3,12	1/1:0,3:3:52,9,0
-chr21	31243193	chr21:31243193:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:10:44,0,46	0/1:2,0:4:14,0,18	1/1:0,8:9:118,23,0
-chr21	31256589	chr21:31256589:M	ACACACACACACACACACACACACACACACACACACACAC	<24>,<25>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6,1:7:175,21,0,104,3,85	1/2:0,9,7:18:255,113,62,161,0,114	1/1:0,4,0:4:110,12,0,77,12,67
-chr21	31258814	chr21:31258814:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,4:17:255,63,24,237,0,191	1/2:0,6,13:19:255,190,172,104,0,50	1/1:0,32,0:33:255,99,0,255,97,255
-chr21	31259124	chr21:31259124:M	TTCTTTTTTTTTTTCCTTTTTCTTTTT	<4.7>	.	.	Motif=TTCTTT	GT:AD:DP:PL	1/1:0,14:14:255,42,0	.	1/1:2,25:27:255,40,0
-chr21	31259625	chr21:31259625:M	AATAAAATAATAATAATAATAATAATAATAAT	<12.7>,<13.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:16,14,0:30:255,0,255,255,255,255	1/2:0,6,3:10:249,64,36,107,0,80	0/0:29,0,0:29:0,87,255,87,255,255
-chr21	31260244	chr21:31260244:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:6,5:12:54,0,81	0/0:23,1:24:0,52,255
-chr21	31260676	chr21:31260676:M	AGAAAAAGAAAGATAAAGAGAAAAGAAAAAAAAAA	<6>	.	.	Motif=AGAAAA	GT:AD:DP:PL	0/1:15,9:24:105,0,226	0/1:17,15:34:200,0,243	1/1:1,16:18:255,27,0
-chr21	31261263	chr21:31261263:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13:34:255,0,255	1/1:1,15:17:255,21,0	0/0:20,0:21:0,63,255
-chr21	31262935	chr21:31262935:M	AAAAAAAAAGAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:21,24:46:255,0,255	0/0:53,0:55:0,159,255
-chr21	31267517	chr21:31267517:M	TTTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:21,0,12:35:114,209,255,0,255,255	1/2:1,24,4:34:255,56,39,255,0,255	0/0:27,1,0:32:0,56,255,90,255,255
-chr21	31269672	chr21:31269672:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,1:8:0,7,96	0/1:4,8:13:97,0,24	0/1:11,3:15:4,0,141
-chr21	31275127	chr21:31275127:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:23:0,49,255	0/1:16,12:30:133,0,201	0/0:18,1:23:0,48,255
-chr21	31281086	chr21:31281086:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:9:73,0,24	0/0:4,1:6:0,1,59	0/1:4,4:11:54,0,37
-chr21	31283538	chr21:31283538:M	TTTATTTATTTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/0:36,0:36:0,106,255	0/1:18,19:37:250,0,230
-chr21	31290647	chr21:31290647:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:59,59,59,6,6,0	1/1:0,3,0:4:109,12,0,109,12,109	0/2:1,0,5:8:153,154,181,0,29,8
-chr21	31298736	chr21:31298736:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,8,0:25:150,0,255,130,255,255	0/2:15,3,9:30:208,92,255,0,255,255	0/1:10,12,1:25:255,0,209,175,241,255
-chr21	31301842	chr21:31301842:M	AAATAAATAGATAAATAGATAAATAAATAAATAAA	<9.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:6,7:14:76,0,64	0/1:2,1:4:5,0,26	0/1:12,6:19:43,0,145
-chr21	31305417	chr21:31305417:M	AAAAATAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:30:203,0,167	0/1:13,18:31:220,0,134	0/1:9,17:27:234,0,82
-chr21	31311151	chr21:31311151:M	GTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTTTGT	<8.5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:14,10:24:153,0,241	0/1:17,13:31:203,0,255	0/1:16,17:33:255,0,255
-chr21	31321335	chr21:31321335:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.2>	.	.	Motif=TGTT	GT:AD:DP:PL	0/1:9,21:30:255,0,161	0/1:12,12:24:255,0,255	0/1:14,17:32:255,0,255
-chr21	31325287	chr21:31325287:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,10:27:197,0,255	0/1:15,19:34:255,0,255	0/1:18,16:35:255,0,255
-chr21	31327644	chr21:31327644:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:10:5,0,100	0/1:3,4:8:42,0,36	1/1:1,4:6:58,0,0
-chr21	31334290	chr21:31334290:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,23:25:255,72,0	0/1:14,8:23:88,0,186
-chr21	31335706	chr21:31335706:M	AAAAAAAAAGAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:31:0,90,255	0/0:25,0:27:0,75,255	0/1:17,9:28:160,0,255
-chr21	31336489	chr21:31336489:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:2,0,55	0/1:6,4:10:37,0,70	0/1:3,4:9:62,0,25
-chr21	31337501	chr21:31337501:M	TTATTATTATTATTGTTGTTATTATTATTATTATTATTATTATTATT	<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/0:13,0:14:0,38,211	0/1:22,11:34:88,0,255
-chr21	31352546	chr21:31352546:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:18:37,0,146	0/1:7,6:13:64,0,81	0/0:24,1:27:0,61,255
-chr21	31355174	chr21:31355174:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,22,178	0/1:4,11:18:141,0,14	0/1:5,2:8:12,0,59
-chr21	31355525	chr21:31355525:M	TTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<9.2>,<12.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:7,8,0:15:226,0,159,252,133,255	1/2:0,8,3:11:255,55,66,237,0,236	0/2:9,0,6:15:71,115,255,0,168,126
-chr21	31359806	chr21:31359806:M	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGAA	<16.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:4,4:9:82,0,82	0/1:3,9:13:200,0,43	0/1:2,8:11:177,0,23
-chr21	31361838	chr21:31361838:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<10>,<12>	.	.	Motif=TAGA	GT:AD:DP:PL	0/2:16,0,17:33:213,255,255,0,247,195	0/1:16,27,0:43:255,0,151,255,232,255	0/2:10,0,13:23:165,229,255,0,149,110
-chr21	31362446	chr21:31362446:M	ATTATTATTATTATTATTATTATTATTATTATTAT	<13.7>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,8:22:155,0,255	0/0:8,0:9:0,24,219	1/1:0,9:9:248,27,0
-chr21	31366086	chr21:31366086:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,3,11	0/1:2,3:5:67,0,40	0/1:1,1:2:22,0,22
-chr21	31377184	chr21:31377184:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,15:30:255,255,185,255,0,176	1/2:0,11,9:22:255,154,91,206,0,148	2/2:0,2,14:16:255,255,214,47,12,0
-chr21	31384402	chr21:31384402:M	AAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5,1:14:59,0,102,57,123,255	0/2:4,2,4:13:105,56,104,0,48,95	0/2:7,2,2:14:24,5,111,0,107,190
-chr21	31385718	chr21:31385718:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,4:26:0,2,255	0/1:14,4:18:17,0,192	0/1:12,11:24:129,0,157
-chr21	31387196	chr21:31387196:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:146,15,0	1/1:0,7:8:210,22,0	0/0:1,0:1:0,3,29
-chr21	31388213	chr21:31388213:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<16>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:5,0,16:23:255,189,255,0,142,96	1/2:0,15,12:29:255,150,64,187,0,102	0/0:4,0,0:5:0,12,121,12,121,121
-chr21	31388480	chr21:31388480:M	AAAATAAATGAAATAAAATAAAATAAAATAAA	<7.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:11,9:20:104,0,140	0/1:14,11:25:132,0,188
-chr21	31392571	chr21:31392571:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:166,17,0	0/1:2,7:10:96,0,5	0/1:2,3:5:37,0,19
-chr21	31392959	chr21:31392959:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:30:192,0,179	1/1:2,22:26:255,41,0	0/0:19,2:24:0,33,255
-chr21	31394688	chr21:31394688:M	TCTCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTC	<12>,<22>,<24>,<25>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,0,3,6,0:11:173,197,255,105,109,78,30,58,0,26,96,149,55,53,121	2/4:3,0,5,3,5:18:189,220,255,132,165,122,42,160,24,111,25,189,0,101,149	1/3:0,6,0,6,0:16:255,147,146,251,102,237,151,0,151,134,203,52,200,148,186
-chr21	31394729	chr21:31394729:M	CACACACACACACACACACACACACACACACACACACACACACACAC	<19.5>,<21.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,3,3:12:160,142,172,81,101,89,83,77,0,102	0/3:3,0,0,3:8:90,102,187,102,171,165,0,79,64,63	1/2:0,8,5,0:22:255,112,61,245,0,197,255,123,245,255
-chr21	31395238	chr21:31395238:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:33:185,0,242	0/1:16,19:35:234,0,181	0/0:30,1:34:0,71,255
-chr21	31406181	chr21:31406181:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/0:29,2:31:0,56,255	0/1:17,9:26:84,0,228
-chr21	31409108	chr21:31409108:M	TTTTCTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/0:12,0:13:0,39,255	0/1:4,13:19:255,0,69
-chr21	31410087	chr21:31410087:M	GTGTGTGTGTGTGTGTGAGGTTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:31,0:33:0,96,255	0/1:17,7:24:59,0,246
-chr21	31410487	chr21:31410487:M	GTGTGTGTGATAGTGTGTATGTGTATGTG	<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,24:24:255,71,0	1/1:0,34:34:255,100,0
-chr21	31411472	chr21:31411472:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:11:15,0,100	0/1:3,5:9:68,0,24	0/1:2,5:11:74,0,24
-chr21	31412785	chr21:31412785:M	AAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,3,13	0/0:2,0:3:0,9,74	0/1:2,11:17:255,0,26
-chr21	31423701	chr21:31423701:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,4,32	0/0:1,0:2:0,3,31	1/1:0,19:19:255,57,0
-chr21	31428883	chr21:31428883:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:26:0,55,255	0/0:15,2:22:0,18,255	0/1:13,12:27:158,0,155
-chr21	31428893	chr21:31428893:M	AAAAGTAAAAGTAAA	<1.8>	.	.	Motif=AAAAGT	GT:AD:DP:PL	0/0:26,2:28:0,40,255	0/1:20,7:27:71,0,255	0/1:31,6:37:19,0,255
-chr21	31430211	chr21:31430211:M	AAAAAAAAAAAAAAAA	<11>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,19:24:178,241,255,21,67,0	2/2:0,0,3:7:72,73,130,18,15,0	0/1:1,5,2:12:121,0,91,106,5,128
-chr21	31430226	chr21:31430226:M	ATATATATATATATATATATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,0:16:1,0,102	0/0:5,0:6:0,16,71	1/1:3,6:16:106,7,0
-chr21	31430274	chr21:31430274:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/0:31,0:32:0,86,255	0/0:17,0:17:0,46,190	0/1:9,14:25:115,0,34
-chr21	31438180	chr21:31438180:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,14	0/0:0,0:1:0,3,17	1/1:0,13:14:255,42,0
-chr21	31441886	chr21:31441886:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,45,0	1/1:1,13:17:255,19,0	0/1:20,5:27:68,0,255
-chr21	31442071	chr21:31442071:M	ATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:4:47,11,0	.	0/0:17,0:17:0,51,255
-chr21	31445017	chr21:31445017:M	AGAACAGAAGAGAAGAGAAAAGAAAGAACAGAA	<7.8>	.	.	Motif=AGAAC	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,19:19:255,57,0	1/1:0,28:28:255,84,0
-chr21	31448610	chr21:31448610:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:21:220,0,13	0/1:8,8:18:98,0,89	0/1:7,9:16:113,0,78
-chr21	31451710	chr21:31451710:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<23>,<24>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,10,8:18:255,134,83,168,0,117	2/2:0,3,16:19:255,255,211,56,7,0	1/2:0,9,10:19:255,164,111,149,0,94
-chr21	31453691	chr21:31453691:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<8.5>,<9.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,25,0:25:255,75,0,255,74,255	1/2:0,5,3:8:210,54,31,90,0,68	1/2:0,11,10:21:255,186,127,205,0,146
-chr21	31455280	chr21:31455280:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,2,2:6:50,5,31,11,0,20	1/2:0,3,2:5:99,28,19,49,0,35	2/2:0,0,3:3:51,51,51,9,9,0
-chr21	31455417	chr21:31455417:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:143,0,217	1/1:0,29:29:255,85,0	0/1:14,13:28:165,0,174
-chr21	31462730	chr21:31462730:M	TTTTTTGTTTTTTTTTTTTGTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,24:25:255,56,0	1/1:0,9:10:163,29,0	1/1:1,16:19:255,37,0
-chr21	31463813	chr21:31463813:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:19:134,0,90	0/0:22,0:23:0,67,255	0/1:15,10:28:104,0,205
-chr21	31464846	chr21:31464846:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,6:15:117,0,173	1/1:0,7:9:196,24,0	0/1:9,3:14:43,0,205
-chr21	31465576	chr21:31465576:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:20:119,0,128	1/1:2,16:18:247,18,0	0/1:17,9:26:88,0,233
-chr21	31468086	chr21:31468086:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,12:23:158,0,116	1/1:0,25:25:255,73,0	0/1:10,9:19:105,0,122
-chr21	31469080	chr21:31469080:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:9:92,46,74,53,0,90	1/1:0,5,0:8:107,20,0,122,21,168	0/1:3,4,2:10:52,0,45,44,9,115
-chr21	31470002	chr21:31470002:M	TTTTTTTTTTTTTTTTTT	<14>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,9:19:255,164,200,247,0,220	1/1:0,24,0:25:255,75,0,255,75,255	1/2:1,13,8:22:255,125,177,255,0,255
-chr21	31471871	chr21:31471871:M	AATAATAATAATAATAATAATAATAATAATAA	<9.3>,<11.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/2:0,18,16:34:255,255,255,255,0,255	1/1:0,32,0:32:255,96,0,255,96,255	1/2:0,19,9:28:255,168,184,255,0,255
-chr21	31474547	chr21:31474547:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,11:21:247,0,184	1/1:0,34:36:255,102,0	0/1:7,15:24:255,0,121
-chr21	31475026	chr21:31475026:M	TTATTATTATTATTATTATTATTATTATTATTATTATT	<13.3>,<16.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,11,8:20:255,236,204,255,0,255	1/1:0,4,0:5:99,9,0,110,15,138	1/2:0,0,4:6:139,119,113,20,0,8
-chr21	31477475	chr21:31477475:M	TTTTTTTTTTTTTTTTTT	<15>,<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,10,2:13:255,229,211,53,62,32,255,176,0,255	1/2:0,14,10,0:25:255,170,110,235,0,165,255,181,237,255	2/3:0,0,9,5:15:255,255,255,127,132,103,236,165,0,237
-chr21	31482061	chr21:31482061:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<15>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,23,21:46:255,255,255,255,0,255	1/1:0,31,0:34:255,99,0,255,99,255	1/2:0,12,27:39:255,255,255,255,0,238
-chr21	31487538	chr21:31487538:M	TTTTTTTTTTTTTTGTATTTTTTTTTTTTTT	<29>,<30>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:181,181,181,29,29,0	1/2:0,2,4:6:105,57,51,34,0,17	1/2:0,3,3:6:119,45,36,52,0,36
-chr21	31489007	chr21:31489007:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,13:40:128,0,255	1/1:0,33:33:255,97,0	0/1:17,24:42:255,0,190
-chr21	31489495	chr21:31489495:M	GAGGGAGGGAGACAGGGAGGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGA	<13.8>	.	.	Motif=GAGG	GT:AD:DP:PL	0/0:8,0:9:0,24,102	0/1:7,4:11:15,0,49	0/0:6,0:7:0,19,79
-chr21	31489572	chr21:31489572:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	1/1:2,19:21:255,24,0	1/1:0,17:17:255,50,0	1/1:1,24:25:255,55,0
-chr21	31491150	chr21:31491150:M	AAGGAAGGGAAGGAAGGGAAGGAAGGAAGGA	<10>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:10,10:20:223,0,221	1/1:0,28:28:255,84,0	0/1:14,10:24:217,0,255
-chr21	31492042	chr21:31492042:M	TATGTGTGTATATATATATGTGATGTGTGTATATATGTATGTAT	<11.5>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:14,19:37:109,0,66	1/1:0,26:31:255,57,0	0/1:17,12:30:49,0,101
-chr21	31496460	chr21:31496460:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,3:12:255,51,17,129,0,102	1/1:0,4,1:6:142,17,0,77,1,62	1/1:0,2,0:3:73,9,0,52,9,46
-chr21	31499869	chr21:31499869:M	AAAACAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:31:255,91,0	1/1:0,28:31:255,86,0	1/1:0,36:36:255,105,0
-chr21	31500167	chr21:31500167:M	AAAATAAAATAAAATAAATAAAA	<4.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:31,0:31:0,93,255	0/1:15,19:34:255,0,239
-chr21	31506011	chr21:31506011:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,3:8:161,44,29,80,0,59	1/1:0,9,0:10:255,28,0,176,27,151	1/1:0,5,0:7:156,19,0,112,18,98
-chr21	31506262	chr21:31506262:M	ACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,12:25:255,225,152,245,0,172	1/1:0,33,0:38:255,113,0,255,111,255	1/2:0,17,15:32:255,255,182,255,0,219
-chr21	31508388	chr21:31508388:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:19:123,0,106	0/1:7,2:10:5,0,101	0/1:4,12:16:164,0,23
-chr21	31510815	chr21:31510815:M	AAAAAAAAAAAAACAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:24:255,53,0	1/1:3,32:35:255,50,0	1/1:2,30:34:255,63,0
-chr21	31519509	chr21:31519509:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:8:94,5,0	1/1:0,5:5:84,15,0	0/1:1,2:5:27,0,7
-chr21	31521737	chr21:31521737:M	CACACACAAACACACACACACACACACACACACACACACACA	<23>,<25>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,4,8:13:255,214,196,108,0,82	2/2:0,0,14:14:255,255,255,42,42,0	1/2:0,6,8:16:255,207,183,158,0,138
-chr21	31524017	chr21:31524017:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:30:116,0,255	0/0:29,1:31:0,73,255	0/1:12,14:27:176,0,150
-chr21	31525368	chr21:31525368:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,35,243	0/1:14,5:19:29,0,183	0/0:20,0:21:0,61,255
-chr21	31526034	chr21:31526034:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:162,14,0	1/1:0,6:7:114,20,0	1/1:0,8:10:161,29,0
-chr21	31528829	chr21:31528829:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:41:255,121,0	1/1:0,43:44:255,129,0	1/1:0,48:49:255,144,0
-chr21	31531761	chr21:31531761:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,21:34:255,0,105	0/0:35,2:38:0,76,255	1/1:3,33:39:255,59,0
-chr21	31537443	chr21:31537443:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,19:27:255,0,134	0/0:14,0:20:0,39,255	1/1:0,20:22:255,63,0
-chr21	31539271	chr21:31539271:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:196,0,205	1/1:1,21:22:255,47,0	0/0:26,0:27:0,79,255
-chr21	31540386	chr21:31540386:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:16:0,46,255	0/1:10,4:16:21,0,141	0/0:25,1:27:0,62,255
-chr21	31542427	chr21:31542427:M	AAAAAAAAAGAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:138,0,157	0/0:20,0:20:0,59,255	1/1:3,32:35:255,49,0
-chr21	31546188	chr21:31546188:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,19:37:255,255,255,255,0,191	1/1:0,24,0:24:255,72,0,255,71,255	2/2:0,0,28:28:255,255,255,83,83,0
-chr21	31546557	chr21:31546557:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<6.8>,<9.8>,<10.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/3:0,8,0,7:17:255,204,175,255,131,255,172,0,255,238	1/1:0,22,0,0:28:255,81,0,255,83,255,255,83,255,255	2/3:0,0,15,16:31:255,255,255,255,255,203,255,255,0,185
-chr21	31548133	chr21:31548133:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:6:103,0,12	1/1:0,0:2:15,3,0	1/1:0,4:5:142,13,0
-chr21	31548482	chr21:31548482:M	TTGTTGTTGTT	<4>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:12,2:14:0,17,85	1/1:1,3:4:17,1,0	0/0:30,0:31:0,72,253
-chr21	31552049	chr21:31552049:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	1/1:0,3:3:90,9,0	0/0:0,0:1:0,3,11
-chr21	31555187	chr21:31555187:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,15:32:185,0,218	1/1:0,35:35:255,103,0	0/0:31,0:33:0,94,255
-chr21	31556536	chr21:31556536:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,28:54:255,0,255	0/0:38,1:39:0,97,255	1/1:1,50:51:255,132,0
-chr21	31562564	chr21:31562564:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,20:21:255,63,0	1/1:0,19:22:255,65,0
-chr21	31564537	chr21:31564537:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,2,4:9:83,46,101,35,0,57	0/1:3,3,0:8:67,0,64,83,54,143	0/2:2,0,2:4:23,34,103,0,34,22
-chr21	31565032	chr21:31565032:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:12:55,0,89	0/0:15,1:17:0,22,227	1/1:1,16:19:255,37,0
-chr21	31566411	chr21:31566411:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,20:26:255,37,0	1/1:0,14:16:222,45,0	1/1:1,15:22:234,39,0
-chr21	31567031	chr21:31567031:M	TCTCTGTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:21,21:42:255,0,255	0/0:31,1:32:0,69,255	1/1:0,29:30:255,90,0
-chr21	31567529	chr21:31567529:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,7:33:43,0,255	1/1:0,24:26:255,63,0	0/0:39,0:40:0,117,255
-chr21	31569074	chr21:31569074:M	TTTTAATTTTATTTTTTTTTTA	<3.8>	.	.	Motif=TTTTAT	GT:AD:DP:PL	0/1:22,13:35:185,0,255	1/1:2,29:31:255,47,0	0/0:32,1:33:0,78,255
-chr21	31570685	chr21:31570685:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:41:185,0,255	1/1:2,14:16:203,13,0	0/0:24,2:30:0,51,255
-chr21	31571656	chr21:31571656:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,9:19:176,0,176	1/1:0,14:15:255,32,0	0/0:10,0:12:0,30,254
-chr21	31571668	chr21:31571668:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:2:0,3,23	0/1:3,3:6:51,0,51	1/1:0,0:2:17,3,0
-chr21	31574170	chr21:31574170:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:5:28,0,13	1/1:1,9:11:122,15,0	0/1:2,1:5:1,0,37
-chr21	31574614	chr21:31574614:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:8:121,0,28	0/1:2,3:8:94,0,34	0/1:1,2:6:51,0,26
-chr21	31577048	chr21:31577048:M	AAAAACAAAAAACAAACAAACAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,241	1/1:1,30:31:255,73,0	0/0:35,0:35:0,103,255
-chr21	31579809	chr21:31579809:M	AAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:3:11,3,0	1/1:0,3:4:101,12,0	0/0:0,0:1:0,0,0
-chr21	31585776	chr21:31585776:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,10:15:255,148,133,77,0,37	1/2:2,3,7:13:142,65,104,24,0,23	2/2:1,2,9:12:161,113,131,17,0,0
-chr21	31585937	chr21:31585937:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:6:72,0,0	0/1:2,8:11:115,0,2	1/1:0,10:10:176,29,0
-chr21	31587279	chr21:31587279:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,41:42:255,106,0	1/1:0,50:50:255,147,0	1/1:1,36:37:255,91,0
-chr21	31587931	chr21:31587931:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:19:255,54,0	1/1:0,19:23:255,68,0	1/1:0,25:25:255,75,0
-chr21	31588097	chr21:31588097:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:101,18,6,53,0,42	1/2:0,3,1:4:101,17,5,50,0,39	1/2:0,1,3:4:100,52,41,17,0,6
-chr21	31590020	chr21:31590020:M	ACACACACACATACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,19:20:255,57,0	1/1:0,21:21:255,63,0	1/1:0,12:13:255,36,0
-chr21	31590832	chr21:31590832:M	GGGGTGGGGGGCGGGGGGGAGGGGGGGGG	<22>,<28>	.	.	Motif=G	GT:AD:DP:PL	0/1:5,3,0:8:60,0,117,75,91,153	0/2:6,0,7:13:85,121,255,0,103,67	1/1:0,11,0:11:255,33,0,255,33,255
-chr21	31591568	chr21:31591568:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,3:19:29,36,235,0,228,255	0/1:12,10,1:24:110,0,144,125,192,255	2/2:0,2,16:20:255,255,255,53,23,0
-chr21	31592291	chr21:31592291:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14,0:32:170,0,245,255,255,255	0/2:18,0,22:41:255,255,255,0,255,200	1/1:0,43,0:44:255,129,0,255,132,255
-chr21	31593928	chr21:31593928:M	TTTTTTTTTTTTTTTCTTTTTTTTTT	<23>,<27>,<28>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,7,5:14:197,227,255,52,88,47,69,140,0,104	1/2:0,14,6,0:21:255,99,130,255,0,255,255,99,255,255	3/3:0,0,0,10:10:255,255,255,198,199,171,30,30,29,0
-chr21	31595480	chr21:31595480:M	TTTTTTTTTCTTTTCTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,12:29:139,0,237	0/1:14,17:31:209,0,156	0/0:38,0:38:0,112,255
-chr21	31599363	chr21:31599363:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:5:22,0,8	0/1:1,4:8:50,0,11	0/0:0,0:2:0,0,0
-chr21	31601432	chr21:31601432:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,15:26:255,231,198,189,0,118	0/1:7,4,4:16:87,0,164,18,62,97	1/1:0,21,2:27:255,74,0,255,42,255
-chr21	31602226	chr21:31602226:M	AAAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,9,88	0/1:5,12:19:255,0,104	.
-chr21	31602592	chr21:31602592:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:23:0,49,255	0/0:11,1:13:0,20,179	0/1:12,7:21:82,0,150
-chr21	31603593	chr21:31603593:M	ACACACACACACACACACACACACACAC	<13>,<15>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,16,0,11:31:255,255,255,255,255,255,255,0,255,255	1/2:3,16,14,0:33:255,195,255,230,0,255,255,255,255,255	3/3:0,0,0,22:25:255,255,255,255,255,255,74,74,74,0
-chr21	31606993	chr21:31606993:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:26:168,0,168	0/0:28,2:31:0,55,255	1/1:1,36:37:255,91,0
-chr21	31607875	chr21:31607875:M	AAGAAAAAAAAAAAGAAATAAATAAAGAAAGAAAGAGAGAGATGGACAGAGAGAAAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAGAAAGA	<8.5>	.	.	Motif=AAGA	GT:AD:DP:PL	1/1:0,5:5:114,15,0	1/1:0,2:2:48,6,0	1/1:0,2:2:44,6,0
-chr21	31608132	chr21:31608132:M	TTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:10,8:19:83,0,117	0/0:25,0:27:0,73,255	1/1:0,24:24:255,70,0
-chr21	31612588	chr21:31612588:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:10:52,0,138	0/0:10,0:13:0,27,255	1/1:0,2:2:53,6,0
-chr21	31616857	chr21:31616857:M	TTTTTTCTTTTTATTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:247,0,255	0/1:16,13:29:255,0,255	1/1:0,24:24:255,72,0
-chr21	31618324	chr21:31618324:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,4:5:123,15,0	0/1:1,0:2:5,0,23
-chr21	31620706	chr21:31620706:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,2:19:0,20,255	0/0:23,2:25:0,39,255	0/1:11,4:16:23,0,163
-chr21	31622131	chr21:31622131:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATA	<9>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,2,4:11:163,83,66,41,0,24	2/2:0,0,0:1:0,0,0,0,0,0	1/2:0,4,1:6:159,22,4,88,0,71
-chr21	31629079	chr21:31629079:M	AAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,13:22:255,0,151	0/0:26,0:30:0,88,255	1/1:0,31:36:255,106,0
-chr21	31631721	chr21:31631721:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:0,29:30:255,88,0	1/1:0,28:28:255,82,0
-chr21	31632640	chr21:31632640:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:18:4,0,197	0/1:16,6:24:35,0,232	0/1:2,9:11:131,0,4
-chr21	31633645	chr21:31633645:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,21:36:255,0,176	0/1:23,27:50:255,0,255	1/1:1,45:47:255,120,0
-chr21	31634123	chr21:31634123:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14:16:255,42,0	1/1:0,18:21:255,48,0	1/1:0,15:18:255,45,0
-chr21	31634730	chr21:31634730:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2,0:3:49,0,19,34,25,53	0/2:1,0,3:4:74,49,65,0,24,15	1/1:0,5,1:6:169,18,0,86,1,69
-chr21	31634920	chr21:31634920:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,4,16:33:255,222,255,0,160,255	0/1:19,10,1:31:95,0,250,128,255,255	2/2:0,3,23:27:255,255,255,72,26,0
-chr21	31636513	chr21:31636513:M	TTTTTGTTTTGTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20:22:255,29,0	1/1:0,10:14:171,29,0	1/1:1,18:19:255,38,0
-chr21	31637234	chr21:31637234:M	TTATTATTTATTATTATTAATATTATTATTATT	<9>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:6,8:14:175,0,119	0/0:31,0:31:0,93,255
-chr21	31641109	chr21:31641109:M	TTTTTTTTTTGTTGTTTTTTTTTGTTTTGTTTTTTTTTT	<38>,<49>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:21:255,62,0,255,63,255	1/2:0,8,5:15:255,140,114,146,0,199	1/1:0,24,0:24:255,71,0,255,72,255
-chr21	31643999	chr21:31643999:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:7:47,0,30	0/1:1,2:4:21,0,16	1/1:1,6:8:93,7,0
-chr21	31650075	chr21:31650075:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:129,0,95	0/1:6,11:18:145,0,50	1/1:1,19:21:255,44,0
-chr21	31652835	chr21:31652835:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:51,2:54:0,122,255	0/1:6,14:21:191,0,43	0/0:45,2:49:0,108,255
-chr21	31652917	chr21:31652917:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:4:9,0,19	0/1:2,4:8:58,0,13	0/1:3,7:11:100,0,20
-chr21	31653960	chr21:31653960:M	AAAAAATAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:24,13:37:125,0,255	0/0:28,0:28:0,83,255
-chr21	31663120	chr21:31663120:M	TTTTTCTTTTTTTTTTTTT	<13>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,14,0:22:255,0,135,255,120,255	0/2:10,0,10:23:110,176,255,0,206,146	1/1:0,18,0:23:255,66,0,255,66,255
-chr21	31665971	chr21:31665971:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:17,0,23	0/1:7,2:9:6,0,88	1/1:0,6:7:100,18,0
-chr21	31670629	chr21:31670629:M	CACAGACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,21:43:255,0,255	0/0:41,1:43:0,106,255	1/1:0,51:51:255,150,0
-chr21	31671109	chr21:31671109:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,3,12:35:114,159,255,0,249,255	0/1:9,10,1:22:130,0,101,170,112,255	0/2:3,0,13:16:182,225,255,0,45,6
-chr21	31682377	chr21:31682377:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:26:107,0,198	0/0:30,1:33:0,79,255	1/1:1,31:35:255,84,0
-chr21	31683710	chr21:31683710:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/1:17,26:48:255,0,181	0/0:33,1:36:0,87,255
-chr21	31684992	chr21:31684992:M	GGGGGGGTGGGGGGGGGGTGGGG	<22>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,15:15:255,44,0	0/1:8,4:12:35,0,101	1/1:0,15:16:255,47,0
-chr21	31686204	chr21:31686204:M	AAAAAAAAAAAAAGAAAAAAAAAAAAAA	<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,9:14:117,132,255,0,87,47	0/1:3,10,0:14:239,0,41,170,48,185	2/2:1,0,10:12:155,150,171,15,24,0
-chr21	31689465	chr21:31689465:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,20:31:255,0,161	0/0:15,0:16:0,45,255	1/1:0,16:18:255,48,0
-chr21	31691673	chr21:31691673:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,1,7:19:91,121,255,0,119,119	1/1:3,18,0:24:255,18,0,255,62,255	0/2:5,1,17:24:240,255,255,0,57,28
-chr21	31699503	chr21:31699503:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,0:42:0,120,255	0/1:13,22:38:255,0,247	0/0:38,0:42:0,120,255
-chr21	31702509	chr21:31702509:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,0:45:0,133,255	0/1:18,11:29:114,0,236	0/0:52,1:53:0,137,255
-chr21	31704533	chr21:31704533:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:25,21:49:234,0,255	0/0:49,2:52:0,117,255
-chr21	31709351	chr21:31709351:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,5:30:51,0,255	0/0:30,0:32:0,96,255	1/1:0,6:10:178,5,0
-chr21	31709855	chr21:31709855:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,1:40:0,100,255	0/1:25,13:39:120,0,255	0/0:44,2:46:0,100,255
-chr21	31712223	chr21:31712223:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,25:26:255,255,255,58,75,0	1/2:2,10,10:23:255,140,223,148,0,230	2/2:3,0,16:19:230,255,255,3,48,0
-chr21	31712528	chr21:31712528:M	TTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,5:11:68,88,250,0,86,58	0/1:8,5,3:16:95,0,220,73,85,176	2/2:1,0,13:14:210,247,255,24,42,0
-chr21	31713747	chr21:31713747:M	GGGGTGGGGTGGGGGGGG	<3.8>	.	.	Motif=GGGGT	GT:AD:DP:PL	0/1:19,12:31:204,0,255	0/0:30,1:31:0,68,255	1/1:0,19:19:255,57,0
-chr21	31717827	chr21:31717827:M	ATATATATATATATATA	<13.5>,<14.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,4,3,0:23:140,0,255,20,255,255,179,255,255,255	0/3:10,0,0,5:18:14,52,255,52,255,255,0,255,255,255	1/2:0,11,9,0:21:255,104,41,134,0,73,255,104,134,255
-chr21	31723611	chr21:31723611:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,18:35:192,0,150	0/0:22,0:30:0,63,255	1/1:0,27:28:255,70,0
-chr21	31732180	chr21:31732180:M	GCCCCGCCCCCTCCCCGCCTCGTCCCGCCCTGCGCCGCCCTGCACCGCCCCGC	<10.8>	.	.	Motif=GCCCC	GT:AD:DP:PL	0/1:4,7:11:46,0,13	0/1:8,4:12:11,0,54	0/0:7,0:7:0,19,75
-chr21	31735264	chr21:31735264:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:3:30,3,0	.	1/1:0,6:8:187,24,0
-chr21	31737397	chr21:31737397:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:21:32,0,235	0/1:9,2:12:2,0,126	0/1:4,10:14:141,0,32
-chr21	31737562	chr21:31737562:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2,2:8:13,0,69,0,25,71	0/1:12,9,2:26:111,0,148,144,137,255	0/2:2,1,9:13:130,146,243,0,13,8
-chr21	31739170	chr21:31739170:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,2:26:0,39,255	0/1:19,18:43:238,0,214	0/0:49,1:51:0,124,255
-chr21	31739889	chr21:31739889:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:6:0,18,107	0/0:6,1:7:0,3,85	0/1:5,3:9:26,0,70
-chr21	31740692	chr21:31740692:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0,0:4:0,12,83,6,64,58	0/1:4,3,0:9:76,0,95,93,110,214	0/2:1,0,7:9:201,213,255,0,26,3
-chr21	31742780	chr21:31742780:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,12	1/1:0,2:4:30,4,0	0/1:1,3:5:38,0,14
-chr21	31745357	chr21:31745357:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:23:143,0,135	0/0:35,2:39:0,69,255	1/1:2,19:21:255,26,0
-chr21	31746683	chr21:31746683:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,10:16:255,174,150,45,0,38	2/2:0,0,11:11:255,223,193,33,32,0	1/1:2,15,2:19:255,19,0,211,19,255
-chr21	31746848	chr21:31746848:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:34,0,35	0/1:4,6:13:81,0,39	0/0:8,0:11:0,19,137
-chr21	31748867	chr21:31748867:M	TTTTCTTTTTCTTTTCTTTCCTTTTTTTTTTTTTTTTTTTT	<6.5>,<7.2>	.	.	Motif=TTTTCT	GT:AD:DP:PL	2/2:0,0,3:3:74,74,75,9,9,0	1/1:0,4,0:4:100,12,0,101,12,102	0/0:1,0,0:1:0,3,27,3,27,27
-chr21	31749973	chr21:31749973:M	AAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:30:180,0,255	0/1:15,7:25:114,0,255	1/1:0,14:15:255,42,0
-chr21	31750467	chr21:31750467:M	TTTTTTCTTTTCTTTTCTTTTCGTTTTTTTTTTTTTTTTTT	<40>,<42>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,13:14:242,255,255,41,42,0	1/2:1,4,2:9:84,19,32,70,0,110	2/2:1,0,19:21:255,255,255,44,60,0
-chr21	31751658	chr21:31751658:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,21,2:25:255,37,0,255,38,255	1/2:2,7,4:14:162,40,37,64,0,98	1/1:1,17,1:19:255,38,0,255,38,255
-chr21	31753782	chr21:31753782:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,16:19:255,255,255,78,0,29	1/2:1,5,15:22:255,228,255,129,0,93	1/1:0,6,0:6:178,18,0,174,18,171
-chr21	31753798	chr21:31753798:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,16:33:119,0,91	0/0:15,1:16:0,32,165	1/1:0,30:35:255,95,0
-chr21	31757605	chr21:31757605:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,8:13:94,109,231,0,81,44	0/1:3,5,2:11:117,0,59,53,20,72	2/2:2,0,14:16:195,201,248,14,46,0
-chr21	31761135	chr21:31761135:M	TCTCTCCCTCCCTCTCTCCCTCCCTCTCTCCCTCTTTCTCTTTCTCCCTCCCTTTCTCCCTTTCTCTCTCTCTCTCTTTCTCTCT	<19.2>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:2,2:5:24,0,25	0/1:6,3:9:27,0,83	0/1:3,2:7:21,0,40
-chr21	31762836	chr21:31762836:M	TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,34:35:255,103,0	1/1:0,26:26:255,77,0
-chr21	31770101	chr21:31770101:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:9:189,42,24,99,0,74	2/2:2,1,9:12:124,105,153,2,18,0	1/1:0,9,0:10:255,30,0,183,29,158
-chr21	31771013	chr21:31771013:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:22:255,54,0	0/1:1,6:12:163,0,24	1/1:0,22:25:255,74,0
-chr21	31772337	chr21:31772337:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,109,0	1/1:0,15:15:255,44,0	1/1:0,33:33:255,97,0
-chr21	31774025	chr21:31774025:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:26:0,66,255	0/1:13,14:28:166,0,140	0/0:21,0:21:0,62,255
-chr21	31776758	chr21:31776758:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,9,2,4:15:255,110,75,197,39,155,245,0,127,223	2/3:0,1,7,10:18:255,255,255,168,150,116,128,82,0,78	1/1:0,23,0,0:25:255,74,0,255,73,255,255,74,255,255
-chr21	31779996	chr21:31779996:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,17:30:238,248,255,0,189,126	0/1:9,10,1:26:252,0,206,183,156,255	2/2:0,0,22:23:255,255,255,65,57,0
-chr21	31782896	chr21:31782896:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,10,10:25:250,135,225,131,0,226	2/2:1,0,22:23:255,255,255,50,66,0	1/1:0,21,0:24:255,70,0,255,71,255
-chr21	31785883	chr21:31785883:M	CCACTACCACCACCACCACCACCACCA	<45>	.	.	Motif=CCA	GT:AD:DP:PL	0/0:23,6:32:0,20,255	0/1:21,9:30:21,0,255	0/0:36,8:47:0,42,255
-chr21	31787642	chr21:31787642:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,2,11:27:138,174,255,0,169,185	0/1:6,11,1:19:152,0,63,185,72,255	2/2:2,0,20:22:255,255,255,28,60,0
-chr21	31787807	chr21:31787807:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:15:0,43,253	0/1:6,3:10:24,0,77	0/0:11,1:12:0,18,176
-chr21	31788117	chr21:31788117:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,8:17:255,121,97,132,0,90	1/2:1,5,6:15:218,69,71,94,0,76	1/2:1,3,11:16:206,137,162,26,0,9
-chr21	31788880	chr21:31788880:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,19:19:255,56,0	0/1:11,10:21:106,0,124	1/1:0,22:22:255,64,0
-chr21	31796630	chr21:31796630:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,18,11:29:255,255,255,255,0,255	2/2:0,0,10:13:255,255,255,31,31,0	1/1:0,36,0:36:255,106,0,255,108,255
-chr21	31799675	chr21:31799675:M	ACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<18.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,1,11,16:28:255,255,255,255,255,204,206,148,0,126	1/2:0,18,10,1:31:255,181,92,255,0,241,255,126,255,255	3/3:0,0,1,20:22:255,255,255,255,255,255,66,63,47,0
-chr21	31800059	chr21:31800059:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15>,<16>,<21>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,10,7:17:255,255,255,124,189,159,255,179,0,255	1/3:0,11,0,9:22:255,172,239,255,255,255,255,0,187,255	2/2:0,0,25,0:25:255,255,255,75,73,0,255,255,75,255
-chr21	31802596	chr21:31802596:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:20:89,0,133	0/1:7,6:14:62,0,89	0/1:4,9:13:120,0,32
-chr21	31803120	chr21:31803120:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2:8:11,0,81	0/0:8,1:10:0,10,116	1/1:0,9:11:163,29,0
-chr21	31804468	chr21:31804468:M	TCTCTCTCTCTCTCTCTCT	<8.5>,<10.5>,<11.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,9,11,0:21:184,130,196,102,0,144,197,119,183,255	2/3:1,0,11,7:20:227,255,255,74,88,34,90,131,0,86	1/1:0,20,2,0:23:217,39,0,248,17,255,255,30,255,255
-chr21	31806342	chr21:31806342:M	ACAACAACAACAACAACAACAACAACAACAACAACAACAACAA	<9.3>,<10.3>	.	.	Motif=ACA	GT:AD:DP:PL	0/2:13,0,16:30:255,255,255,0,255,255	0/1:10,14,1:25:255,0,224,232,250,255	2/2:0,0,40:40:255,255,255,120,118,0
-chr21	31814221	chr21:31814221:M	TTTATTTATTTATTTATTTATTTATTATTTA	<8.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:16,11:27:120,0,211	0/0:40,0:40:0,118,255
-chr21	31821753	chr21:31821753:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,1,7:19:73,108,255,0,153,157	0/1:13,13,0:30:184,0,140,255,190,255	2/2:3,1,25:29:255,255,255,21,50,0
-chr21	31825690	chr21:31825690:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/1:21,21:42:248,0,245	0/0:35,1:37:0,90,255
-chr21	31830774	chr21:31830774:M	AAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:15:121,0,148	0/0:15,0:18:0,50,255	1/1:0,18:20:255,59,0
-chr21	31835152	chr21:31835152:M	ATTAATTAATTAATTAATTAATTAA	<5.2>	.	.	Motif=ATTA	GT:AD:DP:PL	0/1:25,18:43:222,0,255	0/0:38,0:38:0,112,255	1/1:0,41:41:255,121,0
-chr21	31837540	chr21:31837540:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,11:31:120,0,249	0/1:19,17:38:204,0,219	1/1:1,33:36:255,87,0
-chr21	31841226	chr21:31841226:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7:19:212,0,124	0/0:9,0:10:0,27,253	1/1:0,16:22:255,60,0
-chr21	31843710	chr21:31843710:M	TCTCTCTCTCTCTCT	<67.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,7:24:12,0,255	0/0:16,5:21:0,3,255	0/1:15,18:33:117,0,255
-chr21	31843779	chr21:31843779:M	TCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTC	<11.8>,<12.8>,<33.8>	.	.	Motif=TCCT	GT:AD:DP:PL	2/3:0,0,10,7:18:210,213,227,66,77,46,162,176,0,233	1/3:0,6,0,5:11:198,56,38,154,55,138,145,0,99,134	2/3:0,0,7,18:27:255,255,255,199,199,173,143,143,0,157
-chr21	31843834	chr21:31843834:M	TTTCTTTTTCTTTTT	<22.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:18,7:25:2,0,255	0/0:18,5:23:0,14,255	0/1:16,18:34:96,0,255
-chr21	31849903	chr21:31849903:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,6:8:191,115,96,23,6,0	1/2:0,12,8:20:255,130,72,194,0,137	2/2:0,1,5:6:159,84,67,18,1,0
-chr21	31850852	chr21:31850852:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,2:20:0,23,255	0/1:10,13:26:164,0,105	0/0:18,1:20:0,41,255
-chr21	31853113	chr21:31853113:M	ATATATATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:7:89,20,0	0/0:0,0:2:0,4,15	1/1:0,2:2:26,6,0
-chr21	31853137	chr21:31853137:M	ACACACACACATACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,3:8:51,0,51	0/0:6,0:6:0,18,135	1/1:0,2:4:45,6,0
-chr21	31853265	chr21:31853265:M	ATAGATAGATAGATAGATAGATAGATAGATA	<6.8>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:0,19:19:255,56,0	1/1:0,14:14:255,41,0
-chr21	31853741	chr21:31853741:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,13:44:146,0,255	0/1:7,6:13:71,0,88	0/0:29,0:32:0,89,255
-chr21	31855075	chr21:31855075:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:33:255,59,0	1/1:2,30:34:255,64,0	1/1:2,34:37:255,72,0
-chr21	31856724	chr21:31856724:M	TCTCTCTCTCTCTCTCTCTCTCT	<9.5>,<13.5>,<15.5>	.	.	Motif=TC	GT:AD:DP:PL	1/3:0,9,2,4:25:255,164,135,255,39,255,255,0,255,255	1/3:0,3,0,4:12:224,164,157,147,76,147,72,0,82,70	2/3:0,0,20,5:29:255,255,255,107,108,24,255,255,0,255
-chr21	31857384	chr21:31857384:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,23:43:255,0,191	1/1:0,28:29:255,85,0	0/0:33,0:33:0,97,255
-chr21	31857549	chr21:31857549:M	TTTTTTGTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,42:42:255,123,0	1/1:0,38:38:255,112,0
-chr21	31857814	chr21:31857814:M	ATTTATTTATTTATTTATTTATTTATTTATTT	<7>,<11>,<13>	.	.	Motif=ATTT	GT:AD:DP:PL	2/3:0,0,9,7:17:255,255,255,195,195,166,250,250,0,227	1/2:0,19,9,0:28:255,249,193,255,0,255,255,246,255,255	3/3:0,0,0,9:9:255,255,255,255,255,255,27,27,27,0
-chr21	31858141	chr21:31858141:M	TTGTTGTTGTT	<2.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:26,19:45:214,0,255	0/0:31,0:31:0,92,255
-chr21	31858924	chr21:31858924:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:239,40,0	0/1:6,11:20:155,0,57	1/1:2,8:13:140,2,0
-chr21	31862350	chr21:31862350:M	TTTTTTTTTTTTTCTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:21:115,0,144	1/1:1,21:23:255,49,0	0/0:30,2:34:0,61,255
-chr21	31863345	chr21:31863345:M	TTTTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,8:17:99,146,255,0,153,107	0/1:9,12,1:23:255,0,205,255,138,255	0/0:16,0,0:17:0,51,255,50,255,255
-chr21	31864998	chr21:31864998:M	CCTTCCTTTCTTCCTTCCTTCC	<6.5>	.	.	Motif=CCTT	GT:AD:DP:PL	0/1:17,11:30:150,0,235	1/1:0,15:15:255,44,0	0/0:27,0:27:0,80,255
-chr21	31865216	chr21:31865216:M	TCTATCAATCATCTATTTATCTATCATCTAT	<6.8>,<33.8>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:16,6,0:22:44,0,219,109,255,255	1/2:0,12,5:17:221,50,15,203,0,255	0/0:27,0,0:27:0,79,255,81,255,255
-chr21	31865578	chr21:31865578:M	ATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATC	<15.2>,<33.8>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:9,0,0:9:0,27,169,27,191,248	2/2:0,0,5:5:62,62,62,14,14,0	0/1:7,4,0:14:83,0,88,119,127,255
-chr21	31867823	chr21:31867823:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<16>	.	.	Motif=GA	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/1:10,13:25:255,0,196	0/0:24,0:27:0,72,255
-chr21	31868681	chr21:31868681:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,9:21:104,0,159	1/1:1,21:23:255,50,0	0/0:22,1:24:0,52,255
-chr21	31869154	chr21:31869154:M	GTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,7:18:255,122,156,255,0,255	1/1:0,12,0:13:255,39,0,255,39,255	2/2:2,0,13:15:190,231,255,9,45,0
-chr21	31871339	chr21:31871339:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,11,1:13:255,203,179,26,17,0,255,185,8,255	1/2:0,6,5,0:11:255,85,53,102,0,70,255,85,102,255	0/3:3,0,0,6:10:76,104,245,101,235,231,0,60,52,34
-chr21	31878259	chr21:31878259:M	AAAAAAAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,4:11:48,71,208,0,69,60	1/2:0,11,4:17:255,63,65,255,0,255	0/0:10,1,2:13:0,10,255,2,144,138
-chr21	31886424	chr21:31886424:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:127,0,92	0/1:11,8:19:82,0,133	0/0:38,1:42:0,104,255
-chr21	31892149	chr21:31892149:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:22:119,9,0	0/1:4,2:6:4,0,24	0/1:9,7:21:28,0,65
-chr21	31892181	chr21:31892181:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<16>,<17>	.	.	Motif=AG	GT:AD:DP:PL	0/2:4,2,5:11:73,33,46,0,23,54	0/0:6,1,0:7:0,8,51,18,69,118	1/2:3,5,7:17:117,39,37,3,0,43
-chr21	31892210	chr21:31892210:M	GTGTGTGTGTGTGTGTGTGTGT	<13>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:7,4:12:53,0,121	0/0:16,0:16:0,48,255
-chr21	31900447	chr21:31900447:M	ACACACACACACACACACACACACACACACACA	<15.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:7,0,13:20:175,230,255,0,106,67	1/2:1,17,19:40:255,255,255,255,0,255	0/0:21,2,0:23:0,33,255,67,255,255
-chr21	31905077	chr21:31905077:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:0,32:34:255,99,0	1/1:0,25:28:255,81,0
-chr21	31915055	chr21:31915055:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:23:255,66,0	1/1:0,24:27:255,75,0	1/1:0,31:33:255,96,0
-chr21	31917696	chr21:31917696:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<29>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,2:2:52,6,0	1/1:0,3:4:80,8,0	1/1:0,2:2:56,6,0
-chr21	31924267	chr21:31924267:M	TGTGTGTGTGTGTGTGTGTTTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,1:35:0,84,255	0/0:45,1:46:0,117,255	0/1:17,21:40:255,0,197
-chr21	31925925	chr21:31925925:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:0,21:21:255,62,0	0/1:17,25:42:255,0,185
-chr21	31926952	chr21:31926952:M	TTCTTTCTTTCTTTCCTTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTTTTCTTTCTTATTTCTTTATTTCTTT	<13>,<20.5>	.	.	Motif=TTCT	GT:AD:DP:PL	1/2:1,3,1:7:95,26,43,46,0,63	1/2:1,1,3:6:79,45,65,12,0,28	0/2:2,0,3:7:77,70,118,0,37,39
-chr21	31931069	chr21:31931069:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:3:8,0,24	1/1:0,1:1:16,3,0	0/1:1,4:5:50,0,1
-chr21	31932912	chr21:31932912:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:12:0,0,132	0/0:12,0:12:0,35,201	0/1:9,3:12:16,0,119
-chr21	31933785	chr21:31933785:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:21:0,61,255	0/0:22,1:28:0,52,255	0/1:5,10:17:138,0,41
-chr21	31934443	chr21:31934443:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,121	0/0:2,0:2:0,6,33	0/1:1,3:5:45,0,3
-chr21	31939718	chr21:31939718:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0,1:25:0,72,255,56,255,255	0/2:15,0,6:22:39,85,255,0,251,193	0/1:11,9,2:22:198,0,254,124,158,253
-chr21	31952206	chr21:31952206:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41:43:255,108,0	1/1:0,38:40:255,117,0	0/1:14,33:49:255,0,116
-chr21	31955259	chr21:31955259:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:25:255,62,0	1/1:0,21:22:255,66,0	0/1:18,10:31:206,0,255
-chr21	31955427	chr21:31955427:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,26:30:255,86,0	0/1:9,11:24:238,0,192
-chr21	31960382	chr21:31960382:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,1:40:0,95,255	0/0:50,2:52:0,118,255	0/1:31,23:58:244,0,255
-chr21	31965589	chr21:31965589:M	TTTTTCTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3,0:12:18,0,125,52,134,207	0/1:6,4,0:10:38,0,72,67,84,185	0/2:5,1,5:12:61,75,183,0,56,62
-chr21	31968716	chr21:31968716:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:13,1,6:22:88,33,255,0,224,203	0/0:16,0,0:19:0,56,255,50,255,255	1/2:0,6,14:24:255,150,85,107,0,39
-chr21	31968754	chr21:31968754:M	GAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:14,14:29:255,0,255	0/0:23,0:25:0,63,255	1/1:0,25:32:255,94,0
-chr21	31968804	chr21:31968804:M	GTGTTGTGTCTGTGTGTGTGTATGTGTTGTGTGTAAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<32>,<35>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,6:12:247,109,135,154,0,136	2/2:0,0,11:11:193,222,255,32,33,0	1/1:0,17,0:17:255,51,0,255,51,255
-chr21	31971070	chr21:31971070:M	TTTATTTATTTATTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,32:37:118,45,0	1/1:0,28:30:107,42,0	1/1:0,24:29:90,35,0
-chr21	31971831	chr21:31971831:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:18:56,0,160	0/0:14,1:19:0,37,255	1/1:0,9:13:181,26,0
-chr21	31973562	chr21:31973562:M	GATGATGGTGATGGTGGTGGTGATGATGATGATGATGATGATGATGATG	<17.3>	.	.	Motif=GAT	GT:AD:DP:PL	0/1:15,9:24:101,0,216	0/0:20,0:20:0,59,255	1/1:0,22:22:255,65,0
-chr21	31974997	chr21:31974997:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,2:22:0,27,255	0/0:34,2:36:0,70,255	0/1:19,7:27:57,0,255
-chr21	31979109	chr21:31979109:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:26:222,0,255	0/0:26,0:30:0,89,255	1/1:0,16:19:255,47,0
-chr21	31979516	chr21:31979516:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:12,3,0	0/0:0,0:1:0,3,14	1/1:0,4:4:117,12,0
-chr21	31989714	chr21:31989714:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:11:83,0,120	0/0:12,0:12:0,36,255	1/1:0,8:11:233,27,0
-chr21	31995159	chr21:31995159:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:6,0,11	1/1:0,0:4:24,6,0	1/1:0,3:3:49,9,0
-chr21	32001654	chr21:32001654:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,10:30:104,0,255	0/0:36,0:36:0,106,255	1/1:0,45:45:255,133,0
-chr21	32005669	chr21:32005669:M	AAAAAAAACAAAAAAACAAAAACAAAAAAAAA	<26>,<38>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,14:31:255,255,255,255,0,255	1/2:0,14,11:25:255,255,236,255,0,255	2/2:0,0,16:16:255,255,255,48,48,0
-chr21	32007938	chr21:32007938:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:57,6,0	1/1:0,0:3:3,1,0	1/1:0,7:8:199,21,0
-chr21	32008238	chr21:32008238:M	AAAACAAAACAAAACAAAACAAA	<2.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,50:50:255,150,0	1/1:0,32:32:255,96,0	1/1:0,35:35:255,105,0
-chr21	32013127	chr21:32013127:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:39:255,96,0	0/1:21,18:42:216,0,255	1/1:1,27:30:255,70,0
-chr21	32020058	chr21:32020058:M	CAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATA	<15>,<16>,<17>	.	.	Motif=CAATA	GT:AD:DP:PL	1/2:0,3,3,0:6:126,54,38,47,0,38,109,47,55,126	0/1:3,6,0,0:9:78,0,26,87,52,165,103,52,182,236	2/3:0,0,3,3:6:158,131,122,53,53,36,53,45,0,36
-chr21	32029559	chr21:32029559:M	ACACACACACACACACACACACACACACACA	<13.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,15:27:195,231,255,0,217,142	1/2:0,7,14:21:255,203,182,120,0,60	0/0:20,1,0:21:0,33,255,50,255,255
-chr21	32034249	chr21:32034249:M	TTTTTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10,0:18:251,0,182,255,147,255	1/2:0,11,9:20:255,157,206,255,0,255	0/0:18,0,0:18:0,54,255,53,255,255
-chr21	32044874	chr21:32044874:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,1,3:7:31,34,100,0,26,43	1/2:1,4,1:8:69,2,7,71,0,118	0/2:1,0,2:4:34,43,76,0,14,5
-chr21	32046185	chr21:32046185:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,28:43:255,0,159	0/1:24,18:42:201,0,255	0/0:30,0:30:0,89,255
-chr21	32046565	chr21:32046565:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:25:147,0,255	0/1:13,12:26:244,0,255	0/0:38,0:41:0,117,255
-chr21	32048116	chr21:32048116:M	ACACACAGACACACACACACACACACACACAGACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,16:32:212,0,185	0/1:17,15:33:167,0,212	0/0:31,1:32:0,76,255
-chr21	32049955	chr21:32049955:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:18:76,0,150	0/0:26,1:27:0,62,255	0/1:20,19:40:225,0,252
-chr21	32053344	chr21:32053344:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18,5:45:255,0,255,246,255,255	0/2:14,2,8:25:85,84,255,0,216,183	2/2:1,3,21:25:255,255,255,55,19,0
-chr21	32069592	chr21:32069592:M	TATCTATCTCTATCTACCTACCTACCTATCAATCTAT	<11.2>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:17,20:47:255,0,255	0/0:22,0:30:0,66,255	0/1:12,15:33:255,0,217
-chr21	32077210	chr21:32077210:M	ACACACACCACAACACACACACATACACACACACACACACACACACACACACACACACACACACAC	<36>	.	.	Motif=AC	GT:AD:DP:PL	.	1/1:0,4:4:104,12,0	1/1:0,3:3:79,9,0
-chr21	32078377	chr21:32078377:M	TATTTATTTATTTATTTATTTATTTAT	<9.8>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,10:26:204,0,255	0/0:34,0:35:0,94,255	0/1:14,13:27:255,0,255
-chr21	32080091	chr21:32080091:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:31:95,0,255	0/0:31,1:37:0,87,255	0/1:20,9:31:73,0,255
-chr21	32080732	chr21:32080732:M	TCTCTCTCTCTTTCCTTCTTTCTCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTCTCTCTCTCTCTCTCT	<4.5>,<32>,<37>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,1,3,2:7:94,75,94,25,23,37,74,50,0,68	1/3:0,3,0,3:7:98,38,65,107,74,142,68,0,69,59	2/3:0,2,6,5:17:202,171,224,73,85,114,144,99,0,126
-chr21	32086693	chr21:32086693:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:13:21,0,120	0/0:9,0:11:0,32,172	0/1:11,4:16:22,0,154
-chr21	32092087	chr21:32092087:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:17,0,122	0/1:5,2:8:13,0,63	0/0:11,1:13:0,21,181
-chr21	32096335	chr21:32096335:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,12,98	0/1:10,4:16:49,0,207	0/1:7,6:15:104,0,131
-chr21	32098421	chr21:32098421:M	CTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7.8>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:4,2:6:36,0,98	1/1:0,3:4:97,12,0	0/0:3,0:4:0,11,97
-chr21	32108422	chr21:32108422:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:13:96,0,51	1/1:1,7:11:126,13,0	0/1:1,2:4:23,0,18
-chr21	32109144	chr21:32109144:M	AACAAAAACAAAAAAAAAAC	<3.7>	.	.	Motif=AACAAA	GT:AD:DP:PL	0/1:15,16:32:255,0,255	1/1:0,35:38:255,107,0	0/1:27,19:46:255,0,255
-chr21	32110501	chr21:32110501:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,20,12:33:255,185,121,255,0,255	1/2:0,12,19:32:255,255,237,206,0,118	1/1:0,46,1:50:255,144,0,255,126,255
-chr21	32115837	chr21:32115837:M	TATATATATATCATATATATAATATACATTATATTATTATATATAATAATATAT	<29>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,6:11:105,0,83	0/1:1,1:2:17,0,17	0/0:11,0:11:0,33,254
-chr21	32119419	chr21:32119419:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:27:255,75,0	1/1:1,22:24:255,50,0	1/1:1,27:30:255,69,0
-chr21	32120646	chr21:32120646:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,14:27:179,0,117	0/1:9,11:21:136,0,91	1/1:0,31:34:255,99,0
-chr21	32121018	chr21:32121018:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:10:43,0,60	0/0:10,1:11:0,15,152	0/1:6,8:16:92,0,76
-chr21	32125166	chr21:32125166:M	TTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:22:255,29,0	0/1:3,16:21:255,0,39	1/1:0,22:25:255,73,0
-chr21	32126948	chr21:32126948:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:113,29,17,61,0,47	0/1:3,4,0:8:95,0,60,73,49,103	1/2:1,2,4:7:86,41,58,17,0,14
-chr21	32130074	chr21:32130074:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:14:255,33,0	1/1:1,9:12:233,5,0	1/1:0,17:18:255,51,0
-chr21	32133461	chr21:32133461:M	AAACAAACAAACAAACAAACAAACAAACAGACAAACA	<10.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:11,11:22:147,0,148	0/1:12,6:18:56,0,165	0/0:32,0:32:0,95,255
-chr21	32144785	chr21:32144785:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,2:23:0,9,255	0/1:11,12:28:242,0,251	1/1:0,15:19:255,50,0
-chr21	32147949	chr21:32147949:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:41,0,41	0/1:3,2:7:48,0,61	1/1:0,5:7:133,14,0
-chr21	32157028	chr21:32157028:M	TTTCCTTTCTTTTCCTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<8.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:2,8:10:122,0,9	1/1:0,7:8:139,23,0	0/1:6,2:8:14,0,90
-chr21	32158472	chr21:32158472:M	TTTTTTTTTTTTTTCTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,29:48:255,0,200	0/1:15,10:25:102,0,189	1/1:0,34:34:255,100,0
-chr21	32160286	chr21:32160286:M	ACACACACACACACACACACACACACACACACACACACACACACACATACAC	<19>,<20>	.	.	Motif=AC	GT:AD:DP:PL	0/2:9,0,13:22:255,229,255,0,237,199	0/2:6,0,10:16:246,168,255,0,154,124	1/2:0,12,17:30:255,255,210,217,0,133
-chr21	32160650	chr21:32160650:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,14:24:189,0,115	0/1:11,15:26:187,0,117	0/1:16,12:29:141,0,205
-chr21	32161471	chr21:32161471:M	TTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTGTTT	<10>,<11>	.	.	Motif=TTGT	GT:AD:DP:PL	0/2:10,0,14:24:255,255,255,0,190,216	0/1:8,13,0:21:175,0,84,199,144,255	0/2:20,0,13:33:255,239,255,0,255,255
-chr21	32165433	chr21:32165433:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:41:0,116,255	0/1:24,8:34:43,0,255	0/1:14,11:30:121,0,203
-chr21	32175809	chr21:32175809:M	CAAAAAAAACAAAAACAAAAACAAAACAA	<6>	.	.	Motif=CAAAA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:30,0:30:0,90,255	0/1:11,19:30:255,0,166
-chr21	32177898	chr21:32177898:M	CTTTTTTTTTCTTTTGTTTTCTTTTCTTTTTTTT	<5.8>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:27,0:27:0,79,255	1/1:0,11:11:205,32,0
-chr21	32179440	chr21:32179440:M	CACACACACACACA	<6>	.	.	Motif=CA	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/0:37,0:37:0,109,255	0/1:24,22:46:255,0,255
-chr21	32188004	chr21:32188004:M	TCTCTCTCTCTCTCTCTGTCCCTTTCTCTCTCTCTC	<22>	.	.	Motif=TC	GT:AD:DP:PL	0/0:29,0:31:0,89,255	0/0:25,0:28:0,80,255	0/1:14,6:21:98,0,255
-chr21	32193467	chr21:32193467:M	GATAGATAGATAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATAGAT	<14.8>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:8,11:20:120,0,72	1/1:0,10:10:153,29,0	0/0:14,0:22:0,48,239
-chr21	32196460	chr21:32196460:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:3:0,9,54	0/1:6,3:9:25,0,76	0/0:8,1:9:0,9,122
-chr21	32200430	chr21:32200430:M	TTTTTCTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,1:17:0,32,255	0/0:21,1:23:0,50,255	0/1:9,6:16:62,0,115
-chr21	32209156	chr21:32209156:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:43:0,126,255	0/0:40,0:42:0,123,255	0/1:21,21:44:255,0,255
-chr21	32236211	chr21:32236211:M	AAAAAAAAAAAAATACAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/0:19,0:19:0,56,255	0/1:8,14:23:197,0,79
-chr21	32240770	chr21:32240770:M	TGGTTTTGGTTTT	<2.3>	.	.	Motif=TGGTTT	GT:AD:DP:PL	1/1:1,32:34:255,81,0	1/1:0,29:29:255,80,0	1/1:0,44:44:255,122,0
-chr21	32258835	chr21:32258835:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<9>,<10>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:12,8,0:20:133,0,236,103,157,210	0/2:9,0,9:19:69,86,255,0,108,67	0/1:8,8,0:16:145,0,148,102,103,165
-chr21	32268930	chr21:32268930:M	TTTTTTTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,4:35:0,29,255	0/0:17,0:17:0,50,255	0/1:11,11:22:134,0,134
-chr21	32270263	chr21:32270263:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/0:31,0:32:0,94,255	0/1:16,19:37:240,0,191
-chr21	32280506	chr21:32280506:M	TTTTTTTTTTCTTTTCTTTATTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:23,0:23:0,68,255	0/1:14,18:33:242,0,181
-chr21	32287244	chr21:32287244:M	CACACACACACACACACACACACACACACACACAC	<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,17:31:182,0,134	1/1:4,29:34:255,36,0	0/0:39,0:41:0,118,255
-chr21	32295976	chr21:32295976:M	AAAAAACAAAACAAAACAAAACAAAAAACAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:21,29:50:255,0,255	0/0:23,0:23:0,69,255
-chr21	32301030	chr21:32301030:M	ATATCAAATATATCATATGATATATATCATATCATATATCCATATATATCATGATATATCGTATATGATATCATAT	<12>	.	.	Motif=ATATC	GT:AD:DP:PL	0/0:10,1:13:0,5,244	0/1:12,4:16:61,0,255	0/1:9,3:15:48,0,207
-chr21	32302980	chr21:32302980:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,3,2:15:44,8,99,0,83,173	0/0:15,0,0:16:0,46,254,48,255,255	1/2:0,3,4:10:164,90,69,42,0,21
-chr21	32304613	chr21:32304613:M	CAAACAAAAAAAAACAAACAAAAAACAAAACAAAACAAACAAACAAACAAAACAAAC	<13.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:11,6:27:35,0,77	0/0:18,0:31:0,34,186	1/1:0,27:38:255,83,0
-chr21	32304954	chr21:32304954:M	TTTTTTTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:8:67,0,12	0/0:1,0:1:0,3,17	1/1:0,11:11:192,32,0
-chr21	32315315	chr21:32315315:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:34:123,0,223	0/1:11,4:18:15,0,162	0/1:6,18:25:244,0,30
-chr21	32329107	chr21:32329107:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:34:255,78,0	1/1:1,22:24:255,52,0	1/1:2,27:29:255,49,0
-chr21	32330198	chr21:32330198:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:5:87,0,16,88,17,101	1/1:0,5,0:9:198,24,0,184,22,177	0/2:2,0,4:7:50,56,147,0,23,16
-chr21	32332478	chr21:32332478:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,10:14:255,33,0	1/1:0,11:14:255,33,0
-chr21	32332508	chr21:32332508:M	AAAAAAACAAAAGACAAAAAAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,2:10:0,0,56	0/1:2,4:7:29,0,16	0/0:7,1:11:0,16,93
-chr21	32332555	chr21:32332555:M	AAAAAAACAAAAGACAAAAAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5,1:7:67,8,0,48,5,58	2/2:0,0,3:3:76,47,39,9,8,0	1/1:0,3,1:5:40,1,0,19,1,39
-chr21	32333103	chr21:32333103:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:248,0,255	1/1:1,36:37:255,91,0	0/0:53,1:54:0,141,255
-chr21	32342038	chr21:32342038:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,35:35:255,102,0	1/1:0,40:40:255,116,0
-chr21	32357315	chr21:32357315:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:19:0,28,255	0/1:17,6:24:33,0,217	0/0:14,2:17:0,15,215
-chr21	32369976	chr21:32369976:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:22,0,22	0/0:6,0:6:0,17,98	1/1:1,7:8:100,6,0
-chr21	32376807	chr21:32376807:M	TTTGTTTTGTTTGTTTGTTTGTTTGTTTGTTT	<9>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:12,14:26:192,0,154	0/0:32,0:33:0,97,255	1/1:0,35:35:255,103,0
-chr21	32381427	chr21:32381427:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:35:237,0,185	1/1:2,32:36:255,70,0	0/0:24,3:27:0,26,255
-chr21	32384987	chr21:32384987:M	GAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	<11.8>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:12,10:22:128,0,167	1/1:0,14:14:253,41,0	0/0:22,0:22:0,65,255
-chr21	32387601	chr21:32387601:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:95,6,0	1/1:1,9:13:152,17,0	1/1:0,9:9:153,26,0
-chr21	32391370	chr21:32391370:M	AAAAAAAAAAGAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,16:40:193,0,255	1/1:0,29:31:255,90,0	0/0:35,0:37:0,108,255
-chr21	32391857	chr21:32391857:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,10:17:132,0,77	0/1:4,19:25:255,0,6	0/0:30,1:31:0,74,255
-chr21	32397699	chr21:32397699:M	AAAAAAAAAAAAAAAAAAAAGAGAAAAGAAAAAAGAAAAAAAAA	<45>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:5:37,0,20	1/1:0,2:3:34,7,0	0/0:7,0:9:0,26,139
-chr21	32403009	chr21:32403009:M	AAAAAAAAAAGAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,19:35:255,0,199	1/1:1,43:44:255,112,0	0/0:39,0:40:0,118,255
-chr21	32404234	chr21:32404234:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,6:20:98,0,255	1/1:0,13:15:255,42,0	0/0:14,0:18:0,47,255
-chr21	32404797	chr21:32404797:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:3:29,0,19	1/1:0,9:10:255,30,0	0/0:1,0:1:0,3,26
-chr21	32406053	chr21:32406053:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:124,0,11	1/1:0,11:13:255,39,0	0/0:0,0:1:0,1,2
-chr21	32416305	chr21:32416305:M	TTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,3:18:0,0,216	0/1:7,6:13:64,0,81	0/0:12,2:17:0,12,194
-chr21	32422045	chr21:32422045:M	AAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,3:10:56,76,165,0,102,140	2/2:0,0,2:5:93,94,96,14,14,0	0/1:7,6,0:14:75,0,80,113,120,255
-chr21	32423071	chr21:32423071:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,6:9:202,24,0	.
-chr21	32425151	chr21:32425151:M	AAACAAACAAACAAACAAACAA	<7.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:17,9:30:167,0,255	1/1:0,32:34:255,98,0	0/0:38,0:38:0,114,255
-chr21	32425963	chr21:32425963:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,20:41:255,0,250	1/1:0,34:34:255,100,0	0/0:40,0:42:0,123,255
-chr21	32427856	chr21:32427856:M	AAAAAAAAAAAAAAAAAAAAAA	<19>,<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4,0,0:5:138,15,0,96,15,84,135,15,96,133	1/2:0,7,4,0:12:255,68,33,129,0,96,255,57,128,249	3/3:1,1,0,12:14:194,202,255,186,228,209,21,12,29,0
-chr21	32434594	chr21:32434594:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<6.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,9:19:198,0,223	1/1:0,10:11:255,30,0	0/0:13,0:13:0,39,255
-chr21	32438487	chr21:32438487:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:16,0,51	1/1:0,4:4:65,12,0	0/1:2,3:5:35,0,19
-chr21	32442664	chr21:32442664:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:23:105,0,148	0/1:4,7:11:87,0,36	0/1:13,4:18:17,0,185
-chr21	32444054	chr21:32444054:M	ACACACACACACACACACACACACACACACACACACACA	<16.5>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,9,14:24:255,255,255,242,0,190	2/2:0,0,30:32:255,255,255,96,87,0	0/1:8,14,0:23:255,0,180,255,203,255
-chr21	32447533	chr21:32447533:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:255,0,199	1/1:1,32:35:255,84,0	0/0:34,0:36:0,105,255
-chr21	32450384	chr21:32450384:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,19:30:255,0,106	1/1:2,26:28:255,47,0	0/0:32,0:36:0,104,255
-chr21	32463727	chr21:32463727:M	AAACAAAACAAAACAAAAAAAA	<4.2>	.	.	Motif=AAACA	GT:AD:DP:PL	0/1:25,17:42:255,0,255	1/1:0,44:44:255,131,0	0/0:44,1:45:0,112,255
-chr21	32463782	chr21:32463782:M	AAAAAAAGAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,20:39:255,0,247	1/1:0,45:45:255,132,0	0/0:51,0:51:0,150,255
-chr21	32466825	chr21:32466825:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,21:34:255,0,132	1/1:2,27:30:255,52,0	0/0:31,3:34:0,46,255
-chr21	32467906	chr21:32467906:M	ATATATATATATATATCCTATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,15:41:112,0,227	1/1:0,16:17:228,46,0	0/0:31,0:32:0,89,255
-chr21	32470735	chr21:32470735:M	TCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTT	<8.5>	.	.	Motif=TCTT	GT:AD:DP:PL	0/0:16,6:32:0,7,29	1/1:0,13:26:44,17,0	0/0:20,0:27:0,29,71
-chr21	32471317	chr21:32471317:M	TTTTTTTCTTTTTTCTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,30,255	1/1:0,10:12:255,33,0	0/0:18,0:19:0,57,255
-chr21	32472155	chr21:32472155:M	ATTTATTTATTTATTTATTT	<3>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:1,3:5:61,0,12	0/0:41,0:41:0,123,255
-chr21	32472638	chr21:32472638:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:41:255,0,214	1/1:0,47:47:255,138,0	0/0:27,1:28:0,65,255
-chr21	32475341	chr21:32475341:M	ATCATCATCATCATCATCATCATCATCAT	<10.7>	.	.	Motif=ATC	GT:AD:DP:PL	0/1:16,19:35:255,0,206	1/1:2,30:32:255,58,0	0/0:29,1:31:0,72,255
-chr21	32475880	chr21:32475880:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<13.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,9:9:172,27,0	.	0/1:14,13:27:162,0,181
-chr21	32479848	chr21:32479848:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:196,0,205	1/1:0,30:31:255,91,0	0/0:45,1:47:0,120,255
-chr21	32480303	chr21:32480303:M	AAAAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:19:0,56,255	1/1:0,3:3:82,9,0	0/0:34,0:38:0,113,255
-chr21	32480962	chr21:32480962:M	AAAAAAAAAAAAATAAATAAAAATAAAATAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:165,0,184	1/1:0,23:23:255,68,0	0/0:16,2:18:0,16,255
-chr21	32481510	chr21:32481510:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:35:255,0,170	1/1:2,31:35:255,67,0	0/0:32,4:36:0,32,255
-chr21	32482855	chr21:32482855:M	TTTTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:12:0,35,255	0/0:6,0:7:0,19,175	0/1:3,27:32:255,0,11
-chr21	32483963	chr21:32483963:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,8:24:255,108,191,255,0,255	1/1:0,31,0:31:255,93,0,255,93,255	0/2:12,1,8:21:84,114,255,0,184,155
-chr21	32488588	chr21:32488588:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:40:246,0,255	1/1:1,28:30:255,68,0	0/0:30,1:34:0,81,255
-chr21	32492700	chr21:32492700:M	TTTTCTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,24:40:255,0,185	1/1:2,32:35:255,66,0	0/0:36,2:39:0,78,255
-chr21	32493771	chr21:32493771:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<9.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,10,10:20:255,166,136,191,0,135	1/1:0,19,0:19:255,57,0,255,56,255	0/2:12,0,7:19:76,112,255,0,223,171
-chr21	32494782	chr21:32494782:M	AAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:32:231,0,255	1/1:0,11:13:255,38,0	0/0:30,0:33:0,98,255
-chr21	32498440	chr21:32498440:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:16:41,0,121	1/1:1,9:12:152,17,0	0/0:18,0:18:0,53,255
-chr21	32500191	chr21:32500191:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:107,12,0	1/1:0,7:8:218,24,0	0/0:2,0:2:0,6,72
-chr21	32500818	chr21:32500818:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10:26:110,0,222	1/1:1,28:30:255,70,0	0/0:41,0:41:0,121,255
-chr21	32513167	chr21:32513167:M	TTATTTTATTTTATTTATTTATTTT	<4.8>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:10,6:16:81,0,168	0/0:24,0:24:0,72,255
-chr21	32513541	chr21:32513541:M	TTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:7:0,21,188	0/1:3,4:8:79,0,59	0/0:11,0:11:0,33,255
-chr21	32516184	chr21:32516184:M	TTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:21:0,63,255	0/1:5,11:22:255,0,126	0/0:13,0:17:0,51,255
-chr21	32519455	chr21:32519455:M	ACACACACAAACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<30>	.	.	Motif=AC	GT:AD:DP:PL	0/2:4,0,3:7:31,51,184,0,68,48	0/1:2,5,0:9:129,0,44,137,42,173	0/2:7,0,2:9:7,34,236,0,117,92
-chr21	32523066	chr21:32523066:M	TAAAAATAAAAA	<2.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/0:53,0:54:0,160,255	0/1:17,17:34:255,0,255	0/0:40,0:40:0,120,255
-chr21	32531819	chr21:32531819:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	<1.8>,<4.8>	.	.	Motif=AGGG	GT:AD:DP:PL	1/2:0,0,1:3:59,26,19,19,0,11	1/2:0,3,7:12:255,191,168,84,0,55	1/2:0,0,1:5:58,42,38,9,0,0
-chr21	32540787	chr21:32540787:M	AAAAAAAAAACAAACAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:10,16:26:191,0,91	0/0:26,1:28:0,65,255
-chr21	32545033	chr21:32545033:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:12:0,6,154	0/1:6,7:14:92,0,64	0/0:16,2:20:0,8,251
-chr21	32553744	chr21:32553744:M	AAAAAAAAAAAGAAAAGAAAAAAAGAAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:0,20:21:255,61,0	1/1:0,25:25:255,74,0
-chr21	32560849	chr21:32560849:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:52,0:52:0,154,255	0/1:26,28:55:255,0,255	0/0:49,1:52:0,134,255
-chr21	32567198	chr21:32567198:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<8.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:16,0:17:0,51,255	0/1:6,8:14:181,0,127	0/0:20,0:20:0,60,255
-chr21	32572220	chr21:32572220:M	GTTTTTTTTGTTTTGTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTT	<10.6>	.	.	Motif=GTTTT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:10,18:28:255,0,160	0/0:15,0:15:0,45,255
-chr21	32572428	chr21:32572428:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:39:0,112,255	0/1:17,11:29:216,0,255	0/0:33,0:33:0,99,255
-chr21	32580477	chr21:32580477:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,3:14:47,0,244	0/1:3,3:10:61,0,76	0/0:12,0:18:0,45,255
-chr21	32582567	chr21:32582567:M	TTTCTTTCTTCTTTCTTTCCTTTCTTTCTTTCTTTTCTTTTCTTTTTTC	<13.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:10,11:21:137,0,119	0/0:24,0:24:0,71,255
-chr21	32586207	chr21:32586207:M	GTGTGTGTGTGTGTCCTGAGGTGTGCGAGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:28:0,72,255	0/1:12,6:20:38,0,126	0/0:16,0:20:0,46,242
-chr21	32590335	chr21:32590335:M	GAGAAAGAGAAAGAAAAAGAAAGAAAGAGGAAAGAAAGAGAGAGAGAGAAAGA	<8.2>	.	.	Motif=GAGAAA	GT:AD:DP:PL	0/0:23,0:24:0,69,255	0/1:10,6:16:114,0,223	0/0:20,0:24:0,60,255
-chr21	32598546	chr21:32598546:M	TTTTTTTTTTCTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,2:16:3,0,255	0/1:4,6:10:123,0,79	0/0:9,1:10:0,4,214
-chr21	32608225	chr21:32608225:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:8:54,0,24	0/1:3,2:7:21,0,36	0/1:5,2:9:18,0,54
-chr21	32614237	chr21:32614237:M	TTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:6:0,17,140	0/1:3,11:15:255,0,57	0/0:5,0:6:0,18,160
-chr21	32625344	chr21:32625344:M	ATTTTTTTATTTTATTTATTTATTTATT	<6.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:15,24:39:255,0,237	0/0:28,0:28:0,84,255
-chr21	32627525	chr21:32627525:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:26,0,9	0/1:1,4:5:52,0,2	0/0:4,0:6:0,15,80
-chr21	32637394	chr21:32637394:M	TTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,90	1/1:0,7:9:98,4,0	0/0:6,1:8:0,5,97
-chr21	32667112	chr21:32667112:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:53,0:54:0,159,255	0/1:23,22:47:250,0,255	0/0:52,0:53:0,156,255
-chr21	32668010	chr21:32668010:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:7,0,21:30:255,255,255,0,117,29	1/2:1,14,10:29:255,151,238,255,0,255	1/2:0,23,9:32:255,145,171,255,0,255
-chr21	32674624	chr21:32674624:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,29:30:255,255,255,88,70,0	1/2:0,20,11:33:255,163,98,255,0,255	2/2:2,1,30:33:255,255,255,60,78,0
-chr21	32697499	chr21:32697499:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:18,17:38:206,0,215	0/0:18,3:23:0,12,255
-chr21	32722190	chr21:32722190:M	AAAAAAAAAAAAAAAAA	<11>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,1:7:1,21,177,0,124,108	1/2:0,5,3:8:189,63,64,133,0,124	0/0:6,0,0:7:0,21,186,21,158,145
-chr21	32744261	chr21:32744261:M	AAAAAAAAAAAAAAAAGAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,7:11:149,0,23	0/1:6,7:18:130,0,129	0/1:7,8:22:163,0,125
-chr21	32755128	chr21:32755128:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,27:31:255,19,0	1/1:1,28:33:255,78,0	1/1:1,42:45:255,114,0
-chr21	32758645	chr21:32758645:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,2:15:0,8,180	0/1:5,5:12:73,0,50	0/1:6,1:11:3,0,95
-chr21	32760888	chr21:32760888:M	TGTGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:20:255,56,0	0/1:8,12:20:147,0,78	1/1:0,16:16:255,47,0
-chr21	32763995	chr21:32763995:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:15:1,0,149	0/1:10,11:22:127,0,100	0/0:16,1:19:0,28,253
-chr21	32775615	chr21:32775615:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:24:255,16,0	1/1:2,17:19:255,21,0	1/1:0,9:11:182,32,0
-chr21	32777563	chr21:32777563:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:20:30,0,209	0/0:17,1:20:0,41,255	0/1:15,4:20:12,0,212
-chr21	32780407	chr21:32780407:M	AAAAAGAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:27:255,78,0	0/1:3,21:26:255,0,2	1/1:0,26:30:255,83,0
-chr21	32784925	chr21:32784925:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,40:40:255,118,0	1/1:1,39:40:255,100,0
-chr21	32792904	chr21:32792904:M	TTATTATTATTATT	<5>,<6.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:1,6,37:47:255,255,255,14,0,5	1/2:0,10,30:40:255,255,255,38,0,55	1/2:0,10,33:43:255,255,255,38,0,47
-chr21	32792916	chr21:32792916:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,38:43:255,84,0	1/1:0,29:31:255,78,0	1/1:0,30:35:255,80,0
-chr21	32800804	chr21:32800804:M	AAAAAAACAAAAAAAAAACCAAAAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,13:13:255,39,0	1/1:0,28:28:255,84,0
-chr21	32804276	chr21:32804276:M	TATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,19:19:255,56,0	1/1:1,34:35:255,85,0
-chr21	32805361	chr21:32805361:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,28:30:255,89,0	1/1:1,28:29:255,60,0
-chr21	32807335	chr21:32807335:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:152,18,0	1/1:0,10:11:255,33,0	1/1:0,5:7:167,20,0
-chr21	32809183	chr21:32809183:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:2,7,1,6:16:239,141,149,173,87,255,87,0,196,198	1/2:0,6,3,0:11:179,84,61,102,0,149,161,52,166,222	3/3:0,0,0,7:7:223,223,222,141,141,121,21,21,21,0
-chr21	32809266	chr21:32809266:M	TCCCTCCCTCC	<3.8>	.	.	Motif=TCCC	GT:AD:DP:PL	1/1:0,25:25:255,70,0	1/1:0,14:16:187,42,0	1/1:0,22:22:255,61,0
-chr21	32810247	chr21:32810247:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:100,12,0	1/1:0,2:2:58,6,0	1/1:0,2:2:58,6,0
-chr21	32810422	chr21:32810422:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:12:47,0,73	0/1:7,2:9:7,0,91	0/0:8,0:8:0,23,138
-chr21	32820387	chr21:32820387:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,4:25:19,0,255	0/0:18,2:21:0,3,255	0/1:15,6:23:80,0,255
-chr21	32823072	chr21:32823072:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:11,8:20:177,0,249	1/1:0,7:7:193,21,0	0/0:29,0:29:0,87,255
-chr21	32826211	chr21:32826211:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,2:3:66,9,0	.
-chr21	32847782	chr21:32847782:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,19:42:244,0,255	1/1:0,37:39:255,114,0	0/0:45,0:45:0,133,255
-chr21	32861553	chr21:32861553:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:10:34,0,76	0/0:12,1:14:0,14,174	0/0:10,1:11:0,15,155
-chr21	32869647	chr21:32869647:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCTATCT	<13.8>,<16.8>	.	.	Motif=TCTA	GT:AD:DP:PL	0/2:14,0,10:24:255,255,255,0,255,255	1/2:0,7,13:20:255,255,255,128,0,206	0/0:24,0,0:24:0,71,255,72,255,255
-chr21	32887709	chr21:32887709:M	ACACACACACACACACACACACACACACACACACACACAC	<18>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,13:33:255,199,139,255,0,255	1/2:0,16,13:31:255,187,133,255,0,210	2/2:0,2,21:23:255,255,255,67,32,0
-chr21	32888296	chr21:32888296:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,20:42:255,0,255	1/1:0,54:54:255,159,0	0/0:47,0:47:0,139,255
-chr21	32890901	chr21:32890901:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,20:45:247,0,255	1/1:0,26:26:255,76,0	0/0:35,0:35:0,103,255
-chr21	32891062	chr21:32891062:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:34,0,124	0/0:13,1:14:0,24,207	0/1:8,5:13:50,0,104
-chr21	32901909	chr21:32901909:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:31:255,81,0	1/1:2,36:41:255,84,0	0/1:19,25:49:255,0,220
-chr21	32914140	chr21:32914140:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:19,27:48:255,0,196	0/1:26,16:42:168,0,255
-chr21	32918456	chr21:32918456:M	GGGGGGGGGGTGGGGGG	<19>,<20>	.	.	Motif=G	GT:AD:DP:PL	1/2:0,5,3:14:191,41,17,65,0,49	1/1:0,6,0:22:149,20,0,96,21,120	1/2:0,1,7:18:220,94,69,15,0,21
-chr21	32927053	chr21:32927053:M	GTGTGTGTGTGTGTGTATGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,49:49:255,144,0	0/1:18,16:34:201,0,237
-chr21	32930199	chr21:32930199:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:8:183,23,0	1/1:0,6:6:207,18,0	1/1:0,6:7:211,21,0
-chr21	32932474	chr21:32932474:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,4:41:0,47,255	0/1:17,17:35:205,0,195	0/0:33,4:38:0,39,255
-chr21	32933983	chr21:32933983:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:2:59,6,0	1/1:0,6:7:176,18,0	.
-chr21	32936125	chr21:32936125:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:15:0,43,231	0/1:11,4:15:17,0,121	0/0:13,1:15:0,25,182
-chr21	32936328	chr21:32936328:M	TATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:28,0:30:0,89,255	0/1:17,11:30:214,0,255	0/0:41,0:41:0,123,255
-chr21	32943260	chr21:32943260:M	TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<6.8>,<9.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	2/2:1,0,11:14:195,228,255,16,36,0	2/2:0,0,20:24:255,255,255,59,60,0	1/2:0,10,8:18:255,150,195,255,0,255
-chr21	32944636	chr21:32944636:M	ACAACACAACACAACACAACACAACA	<7.2>	.	.	Motif=ACAAC	GT:AD:DP:PL	0/0:21,0:21:0,63,255	0/0:29,0:29:0,87,255	0/1:18,9:27:165,0,255
-chr21	32950893	chr21:32950893:M	TTTTTTTTTTTTTTTTTTTT	<17>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:1,0,4,7:12:187,176,252,87,133,102,53,60,0,36	2/3:0,0,4,15:19:255,255,255,211,252,199,67,57,0,12	1/3:3,15,2,4:27:255,22,81,255,68,255,255,0,255,255
-chr21	32965121	chr21:32965121:M	ACACACACACACACACACACATACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,22:35:255,0,144	0/0:33,0:33:0,97,255	0/1:24,23:48:255,0,255
-chr21	32967436	chr21:32967436:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:19:84,0,113	1/1:2,16:19:251,21,0	0/0:14,0:15:0,44,255
-chr21	32976555	chr21:32976555:M	CACACACACACACACATACACACACACACACACACACACACACA	<15>,<21>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,15,9,0:24:255,162,210,255,0,255,255,250,255,255	1/3:3,11,0,8:23:255,96,238,255,230,255,255,0,255,255	2/2:0,0,12,0:18:224,255,255,37,39,0,237,255,16,255
-chr21	32986251	chr21:32986251:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,7,4:12:255,69,37,124,0,102	0/1:8,6,1:17:132,0,199,84,207,255	1/2:0,7,4:12:255,67,35,121,0,99
-chr21	32999572	chr21:32999572:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,21:22:255,66,0	0/1:17,18:35:255,0,255	1/1:3,45:48:255,69,0
-chr21	32999586	chr21:32999586:M	ACACACACACACACACACACACACACACACACACTGCACACCACACACCACACACCACACACACAC	<28.5>,<29>,<30>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,3,8:12:255,230,207,139,129,105,62,26,0,29	1/3:0,7,0,9:17:255,222,185,236,144,189,184,0,86,146	2/3:0,0,10,7:21:255,255,217,120,89,59,209,84,0,158
-chr21	33001056	chr21:33001056:M	TTTTTTTTTTTTTTTTT	<13>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,9,0:30:255,164,191,255,0,255,255,249,255,255	2/3:2,0,12,10:25:255,255,255,143,255,232,185,255,0,255	1/2:2,16,12,0:35:255,186,255,255,0,255,255,255,255,255
-chr21	33002579	chr21:33002579:M	TTTATTTATTTATTT	<4.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:14,16:31:220,0,182	0/1:14,17:32:217,0,163	0/1:14,12:26:148,0,186
-chr21	33007081	chr21:33007081:M	TTTTTTTTTTTTTTTTT	<14>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,1,15,4:27:224,246,255,0,91,58,218,255,6,255	1/2:1,19,15,0:38:255,249,255,255,0,255,255,255,255,255	0/3:9,0,0,10:19:124,179,255,178,255,255,0,161,137,106
-chr21	33038352	chr21:33038352:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41,1:43:255,108,0,255,108,255	1/2:1,25,9:36:255,148,64,255,0,255	0/1:25,20,0:45:241,0,255,255,255,255
-chr21	33038431	chr21:33038431:M	TTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7,0:9:240,27,0,237,27,233	2/2:0,0,3:4:102,100,98,12,12,0	0/1:14,4,0:21:100,0,255,119,255,255
-chr21	33039575	chr21:33039575:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,36:40:255,255,255,98,111,0	1/2:2,16,14:37:255,211,255,255,0,255	0/2:21,0,16:39:174,255,255,0,255,255
-chr21	33045483	chr21:33045483:M	AAAAAGAAAAAGAAA	<22.5>	.	.	Motif=AAAAAG	GT:AD:DP:PL	0/1:24,11:37:32,0,255	0/0:26,6:33:0,21,255	0/0:30,10:45:0,1,255
-chr21	33045491	chr21:33045491:M	AAAGAAAGAAAGAGAGAGAGAGAAAGGAAGGACGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,11:11:115,29,0	1/1:0,6:6:63,16,0	1/1:0,10:10:105,26,0
-chr21	33049858	chr21:33049858:M	AAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,3:4:89,10,0	0/1:2,5:8:124,0,47
-chr21	33051155	chr21:33051155:M	TTTTGTTTTGTTTTGTTGTGTTTTGTTTTGTTTTGTTTTG	<4>,<6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,47,0:47:255,141,0,255,141,255	1/2:0,22,11:33:255,255,222,255,0,255	0/1:16,19,0:35:255,0,255,255,255,255
-chr21	33065862	chr21:33065862:M	AAAAAAAAAAAAGAGAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:35:0,102,255	0/0:29,1:32:0,76,255	0/1:17,25:44:255,0,185
-chr21	33065949	chr21:33065949:M	CACACACACACACACACACACACACACACACAC	<15.5>,<17.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,37,0:39:255,114,0,255,116,255	1/2:0,14,13:30:255,228,255,252,0,255	0/1:13,22,0:36:255,0,124,255,193,255
-chr21	33078677	chr21:33078677:M	AAAAGAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:37:255,71,0	1/1:1,29:31:255,73,0	0/1:18,19:38:235,0,225
-chr21	33080202	chr21:33080202:M	ATATATATATATTTTAATAAAATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/1:25,14:40:255,0,255	0/1:5,2:7:47,0,104	0/1:12,7:19:176,0,242
-chr21	33082426	chr21:33082426:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<10.7>,<15.7>	.	.	Motif=TTA	GT:AD:DP:PL	2/2:0,0,9:9:171,195,255,27,27,0	1/2:0,3,2:6:108,35,46,78,0,72	0/2:7,0,6:13:73,110,255,0,128,91
-chr21	33083496	chr21:33083496:M	TTTTTCTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:11:162,15,0	0/0:9,1:10:0,12,137	0/1:7,10:18:124,0,80
-chr21	33085354	chr21:33085354:M	CTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTTTCTCTCT	<19>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,15:16:255,47,0	0/1:15,23:38:255,0,163
-chr21	33087286	chr21:33087286:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,23:25:255,37,0	1/1:2,19:22:255,29,0	0/1:12,17:31:219,0,147
-chr21	33090078	chr21:33090078:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:30,0,137	0/0:7,0:10:0,26,143	0/1:15,2:20:12,0,204
-chr21	33091444	chr21:33091444:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:32,1:33:0,78,255	0/1:16,16:32:197,0,197	0/1:22,19:41:237,0,255
-chr21	33096191	chr21:33096191:M	TTTTTCTTTTTTTCTTTTTTTTTCTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:28:255,0,181	0/1:13,13:26:229,0,226	0/1:11,15:26:255,0,184
-chr21	33096218	chr21:33096218:M	TGTGGGTGTGTGTGTGTGTGTGTGTGTG	<15>	.	.	Motif=TG	GT:AD:DP:PL	1/1:3,36:40:255,64,0	1/1:2,31:36:255,71,0	1/1:1,28:30:255,70,0
-chr21	33096431	chr21:33096431:M	AAACAAAACAAACAAACAAA	<4>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:40,0:41:0,119,255	0/1:27,16:43:173,0,255
-chr21	33098011	chr21:33098011:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:2,1,18:21:255,255,255,26,43,0	1/2:2,6,10:19:255,103,139,65,0,50	0/2:7,1,12:20:167,157,255,0,103,63
-chr21	33102753	chr21:33102753:M	AAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAAAAAAA	<49>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:100,14,0	.	0/1:3,2:5:40,0,69
-chr21	33103773	chr21:33103773:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,7:11:147,111,149,63,0,71	2/2:1,1,9:11:114,127,202,5,3,0	2/2:1,1,9:12:128,141,221,7,5,0
-chr21	33103788	chr21:33103788:M	AGAGAGAGAGAGAGAGAGA	<10>,<11.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:3,10,5:19:113,59,37,41,0,199	1/2:0,8,17:28:255,255,228,58,0,90	0/2:13,6,6:26:70,52,78,0,44,255
-chr21	33105431	chr21:33105431:M	AAAAAAAAATAAAAAAATAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:1,19:20:255,41,0	0/1:19,15:34:179,0,254
-chr21	33107256	chr21:33107256:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:8:77,0,6	1/1:1,5:6:67,1,0	0/1:2,1:5:23,0,21
-chr21	33109001	chr21:33109001:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTT	<3.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,34:34:255,102,0	0/1:14,26:40:255,0,255
-chr21	33112851	chr21:33112851:M	AAAAAGAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:39:255,115,0	1/1:2,34:36:255,70,0	0/1:22,32:54:255,0,242
-chr21	33118875	chr21:33118875:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,25:28:255,29,0	1/1:2,21:27:255,33,0	0/1:10,8:21:107,0,113
-chr21	33119648	chr21:33119648:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:3,33:36:255,53,0	0/1:23,24:47:255,0,255
-chr21	33124517	chr21:33124517:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:230,40,0	0/1:4,9:15:119,0,35	0/1:12,3:15:8,0,166
-chr21	33126872	chr21:33126872:M	TTTTTTTTGTTTTTTGGTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:156,26,0	1/1:1,7:9:111,9,0	0/1:0,4:7:51,0,4
-chr21	33126916	chr21:33126916:M	TATATATATATATATATATGTATA	<11>,<19>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,18:20:255,255,255,60,60,0	2/2:0,0,8:8:215,215,215,24,24,0	1/2:0,11,6:18:255,151,119,169,0,245
-chr21	33129284	chr21:33129284:M	TTATTTTATTATTATTATTATTATTATTATTATTATTATT	<11.3>,<16.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,14,7:21:255,183,141,255,0,255	2/2:0,0,1:1:29,29,29,3,3,0	1/2:0,19,7:26:255,184,127,255,0,255
-chr21	33135339	chr21:33135339:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,13,18:36:255,255,255,193,0,255	0/2:15,0,9:26:194,228,255,0,255,255	1/1:0,36,0:37:255,109,0,255,108,255
-chr21	33138253	chr21:33138253:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:32:255,94,0	0/1:16,14:31:154,0,198	0/1:12,19:31:251,0,124
-chr21	33147645	chr21:33147645:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:38:192,0,255	0/1:11,7:18:69,0,139	0/0:34,1:36:0,88,255
-chr21	33148646	chr21:33148646:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAAAGAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:6:35,0,36	0/1:3,2:5:19,0,36	0/0:6,0:6:0,18,104
-chr21	33151782	chr21:33151782:M	GAAGGAAGGAAAGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGG	<3.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:3,14:21:255,0,53	0/1:1,8:11:189,0,10	0/1:3,15:19:255,0,25
-chr21	33153210	chr21:33153210:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:18:41,0,158	0/0:18,0:20:0,58,255	0/1:7,9:20:105,0,99
-chr21	33155034	chr21:33155034:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	<4.8>	.	.	Motif=AGGG	GT:AD:DP:PL	0/1:3,11:16:255,0,32	0/1:4,6:15:156,0,64	0/1:2,1:3:16,0,43
-chr21	33160384	chr21:33160384:M	ACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/1:30,19:50:255,0,255	0/0:52,0:52:0,156,255
-chr21	33161914	chr21:33161914:M	TCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	<24>,<29>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,8,8:17:255,209,184,219,0,195	0/1:6,7,0:13:163,0,137,181,155,255	0/2:7,0,9:16:205,229,255,0,180,151
-chr21	33164953	chr21:33164953:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,8:33:120,0,255	0/1:15,14:30:255,0,255	0/0:38,0:40:0,114,255
-chr21	33173737	chr21:33173737:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:6:0,15,84	0/0:1,0:1:0,3,16	0/1:6,3:9:23,0,72
-chr21	33179246	chr21:33179246:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:25:144,0,163	0/1:13,8:21:76,0,163	0/0:23,1:27:0,58,255
-chr21	33188370	chr21:33188370:M	TTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,11:27:223,0,255	0/1:13,7:21:139,0,255	0/1:20,5:28:64,0,255
-chr21	33191112	chr21:33191112:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,31:56:255,0,255	0/1:18,21:39:255,0,209	0/1:20,30:50:255,0,225
-chr21	33194740	chr21:33194740:M	AAAACAAAAAAAAAAAGGAAAAAGAAAAAGAAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:15:59,0,125	0/1:14,15:29:180,0,161	0/1:10,14:24:184,0,112
-chr21	33195716	chr21:33195716:M	AAAAAAGAAAAAAAAAAAAAGAAAGAAAAAGAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:124,0,89	0/1:11,10:21:107,0,124	0/1:6,16:23:210,0,47
-chr21	33205242	chr21:33205242:M	TTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:9:44,0,43	0/0:4,1:6:0,1,60	0/1:3,1:5:13,0,36
-chr21	33205385	chr21:33205385:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,4:11:76,0,148	1/1:0,4:4:108,12,0	0/0:8,0:10:0,24,226
-chr21	33217093	chr21:33217093:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:22:78,0,185	0/1:12,11:28:106,0,171	0/0:25,2:31:0,54,255
-chr21	33217359	chr21:33217359:M	AAAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,7:15:162,125,255,0,150,129	0/2:3,3,15:22:255,203,240,0,34,32	0/1:2,10,1:15:255,0,24,165,41,194
-chr21	33222102	chr21:33222102:M	TTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5,1:7:198,0,8,70,9,79	1/2:0,3,1:4:135,17,5,50,0,38	0/2:1,0,4:6:129,68,122,0,57,43
-chr21	33224958	chr21:33224958:M	TTTTTTTGTTTTTTTTTTTTCTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:31:0,57,255	0/0:28,1:31:0,47,255	0/1:10,10:29:196,0,229
-chr21	33226687	chr21:33226687:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:21:0,43,255	0/1:11,4:15:23,0,140	0/0:6,0:8:0,17,102
-chr21	33229879	chr21:33229879:M	CCCCGCCCCTGGCTCCGCCCCCGCCCCCGC	<2>	.	.	Motif=CCCCGC	GT:AD:DP:PL	0/1:11,4:15:57,0,220	0/1:24,4:28:18,0,255	0/1:18,10:28:174,0,255
-chr21	33231006	chr21:33231006:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:50:0,147,255	0/1:22,17:39:189,0,255	0/1:18,29:48:255,0,202
-chr21	33232655	chr21:33232655:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:31:150,0,255	0/1:11,8:20:156,0,238	0/0:53,0:54:0,159,255
-chr21	33234184	chr21:33234184:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0,0:22:0,66,255,66,255,255	0/1:11,8,0:21:161,0,255,130,255,255	0/2:12,0,7:22:141,115,255,0,255,255
-chr21	33237079	chr21:33237079:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<18>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/3:12,0,0,5:18:112,148,255,148,255,255,0,255,255,255	2/3:0,0,8,4:14:255,255,255,114,116,90,215,232,0,218	0/1:7,12,0,0:21:255,0,150,255,192,255,255,196,255,255
-chr21	33238775	chr21:33238775:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,18:42:214,0,255	0/1:21,12:35:111,0,255	0/1:26,21:48:255,0,255
-chr21	33240815	chr21:33240815:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,15,0:26:196,0,116,229,187,255	0/2:11,0,5:16:88,83,228,0,186,255	0/1:15,12,0:27:133,0,188,178,255,255
-chr21	33242753	chr21:33242753:M	GTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,4,7:12:255,177,162,119,0,98	1/2:0,2,5:7:184,129,123,55,0,40	1/1:0,9,0:10:255,30,0,255,30,255
-chr21	33246073	chr21:33246073:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:16,2:19:0,21,255	0/1:10,11:24:138,0,127
-chr21	33247255	chr21:33247255:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:53,0,213	0/0:8,1:10:0,6,192	.
-chr21	33249344	chr21:33249344:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5,0:6:128,0,11,87,25,99	0/1:2,6,0:8:146,0,33,99,49,131	1/2:0,6,6:14:255,103,66,110,0,76
-chr21	33252082	chr21:33252082:M	ATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<8.5>,<11.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:12,10,0:36:93,0,117,158,183,255	0/1:17,13,0:41:109,0,163,198,251,255	1/2:0,14,9:34:255,221,187,236,0,255
-chr21	33262764	chr21:33262764:M	CTCTCTCTCTCT	<7.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,25:30:255,14,0	1/1:0,32:38:255,3,0	0/1:11,13:25:169,0,152
-chr21	33262775	chr21:33262775:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:35:191,0,107	0/1:13,22:38:210,0,101	0/0:26,1:30:0,48,255
-chr21	33263855	chr21:33263855:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:14:54,0,89	0/1:7,7:17:82,0,94	1/1:1,15:18:255,34,0
-chr21	33267483	chr21:33267483:M	TTTTTTTTTTTGTTTGTTTGTTTTTTTGTTTTTTTGTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:58,0,3	1/1:0,9:9:156,26,0	0/1:1,4:6:61,0,1
-chr21	33269652	chr21:33269652:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:71,0,55	0/0:14,2:19:0,19,218	0/1:3,2:7:26,0,34
-chr21	33275148	chr21:33275148:M	TTTTCTTTTTTTTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,1,5:8:88,56,76,10,0,6	1/2:0,4,5:10:183,70,55,76,0,50	2/2:1,0,11:13:174,167,190,18,26,0
-chr21	33277335	chr21:33277335:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:24:255,63,0	1/1:1,11:15:255,9,0	1/1:1,21:26:255,41,0
-chr21	33277644	chr21:33277644:M	TTTTCTTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTT	<48>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:189,21,0	0/1:1,1:4:21,0,20	1/1:0,5:6:131,15,0
-chr21	33287342	chr21:33287342:M	GTTTGTTTGTTT	<4>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:15,17:32:234,0,196	0/1:20,14:34:153,0,255	1/1:0,40:40:255,118,0
-chr21	33288382	chr21:33288382:M	CACACACACACACACACACACACAGACAC	<12.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,11:24:239,0,198	0/1:9,7:19:165,0,180	1/1:0,26:27:255,78,0
-chr21	33293807	chr21:33293807:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,87,0	1/1:0,31:37:255,101,0	0/1:10,24:34:255,0,160
-chr21	33294370	chr21:33294370:M	TGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,10:19:112,0,88	0/1:13,9:22:80,0,144	0/1:11,12:23:130,0,113
-chr21	33295672	chr21:33295672:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,10:28:255,107,111,233,0,188	1/2:1,2,8:11:138,90,109,16,0,0	0/1:0,8,1:14:216,0,6,136,17,139
-chr21	33296954	chr21:33296954:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:15:255,45,0	1/1:0,8:12:243,30,0	0/1:9,11:24:245,0,194
-chr21	33297431	chr21:33297431:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:26,19:49:186,0,255	0/0:43,1:46:0,117,255	0/1:16,14:30:142,0,175
-chr21	33300442	chr21:33300442:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11,0:19:248,0,145,180,122,255	1/2:0,14,15:30:255,200,155,230,0,148	0/0:33,0,2:35:0,99,255,69,255,255
-chr21	33303351	chr21:33303351:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:9:146,0,15	0/1:1,2:5:58,0,28	0/1:2,1:4:21,0,50
-chr21	33319699	chr21:33319699:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,8:33:49,0,255	0/0:26,2:36:0,62,255	0/1:14,15:33:179,0,142
-chr21	33322075	chr21:33322075:M	ATATACATATGGAATATACATATA	<1.8>	.	.	Motif=ATATAC	GT:AD:DP:PL	0/0:24,2:26:0,22,255	0/0:19,2:21:0,7,255	1/1:0,26:26:255,78,0
-chr21	33322236	chr21:33322236:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,6:39:0,41,255	0/0:16,2:19:0,30,255	0/1:12,9:22:48,0,255
-chr21	33322290	chr21:33322290:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,6:44:0,58,255	0/0:14,2:16:0,23,255	0/1:17,9:26:34,0,255
-chr21	33322318	chr21:33322318:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:41,6:47:0,67,255	0/0:12,2:14:0,17,255	0/1:16,9:25:37,0,255
-chr21	33322939	chr21:33322939:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,5:45:0,73,255	0/0:6,1:7:0,9,150	0/1:6,11:17:86,0,122
-chr21	33322967	chr21:33322967:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:39,5:44:0,70,255	0/0:6,1:7:0,9,150	0/1:12,11:23:68,0,255
-chr21	33322995	chr21:33322995:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:47,5:52:0,94,255	0/0:6,1:7:0,9,150	0/1:18,11:29:50,0,255
-chr21	33323023	chr21:33323023:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:45,5:50:0,88,255	0/0:6,1:7:0,9,150	0/1:19,11:30:47,0,255
-chr21	33323051	chr21:33323051:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,5:43:0,67,255	0/0:4,1:5:0,3,98	0/1:15,11:26:59,0,255
-chr21	33323079	chr21:33323079:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:2,5:7:41,0,36	1/1:0,1:1:12,3,0	1/1:0,11:11:134,30,0
-chr21	33323107	chr21:33323107:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,5:8:38,0,61	0/1:1,1:2:6,0,22	1/1:0,10:10:122,28,0
-chr21	33326213	chr21:33326213:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:20:255,0,152	0/1:8,13:24:255,0,171	0/1:9,14:25:255,0,184
-chr21	33326786	chr21:33326786:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:43:0,125,255	0/0:38,0:38:0,110,255	0/1:13,24:37:255,0,105
-chr21	33333615	chr21:33333615:M	TTTTTTTTTTTCTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:8:0,23,134	0/1:3,2:6:15,0,42	0/1:5,4:9:39,0,55
-chr21	33335916	chr21:33335916:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:24:142,0,107	0/1:11,7:18:60,0,124	0/1:12,13:25:142,0,125
-chr21	33336748	chr21:33336748:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:40,1,0	1/1:1,5:6:64,1,0	0/1:3,4:8:53,0,26
-chr21	33337628	chr21:33337628:M	ATATATACACTATATATATACATACTGTATATATA	<16.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,13:25:147,0,126	0/1:20,16:36:155,0,214	0/1:19,18:37:192,0,202
-chr21	33338532	chr21:33338532:M	AAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:198,24,0	1/1:0,9:11:243,23,0	0/1:12,5:19:81,0,255
-chr21	33339928	chr21:33339928:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,3:5:40,34,56,0,8,5	0/1:2,5,0:7:121,0,36,81,32,94	0/2:2,1,6:9:86,67,116,0,17,8
-chr21	33342689	chr21:33342689:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:24,0,96	0/0:5,0:7:0,20,108	0/0:6,0:8:0,21,118
-chr21	33344162	chr21:33344162:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,26:45:255,0,227	0/1:23,22:47:255,0,255	0/1:21,27:49:255,0,253
-chr21	33344761	chr21:33344761:M	TTTACTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.8>,<13.8>,<14.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/3:0,15,0,10:25:255,255,227,255,183,255,255,0,255,255	1/3:0,1,0,2:3:84,55,51,52,35,44,27,0,17,21	2/3:0,0,7,8:15:255,255,255,145,144,102,127,108,0,84
-chr21	33347132	chr21:33347132:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:22:121,0,123	0/1:6,9:17:127,0,55	0/1:6,8:17:105,0,76
-chr21	33360397	chr21:33360397:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,4:35:0,29,255	0/0:29,0:32:0,93,255	0/1:15,16:32:196,0,186
-chr21	33367887	chr21:33367887:M	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTCTTTTCTCTTCTTTTCTTTT	<12.6>	.	.	Motif=TCTTT	GT:AD:DP:PL	0/1:5,9:14:132,0,55	0/1:7,5:12:55,0,92	0/1:7,5:12:58,0,96
-chr21	33368257	chr21:33368257:M	TGTGTGTGTGTGTGTGTGTG	<9>	.	.	Motif=TG	GT:AD:DP:PL	0/0:45,1:46:0,117,255	0/0:41,1:43:0,108,255	0/1:15,13:29:167,0,194
-chr21	33371123	chr21:33371123:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,22:36:255,0,157	1/1:1,29:31:255,73,0	0/1:16,16:33:196,0,205
-chr21	33372253	chr21:33372253:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:7:33,0,35	0/0:1,0:2:0,5,26	0/1:1,2:3:26,0,8
-chr21	33373135	chr21:33373135:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:35,0,128	0/1:10,4:14:29,0,134	0/0:15,0:18:0,52,255
-chr21	33373435	chr21:33373435:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:28:0,81,255	0/1:7,4:14:87,0,155	0/0:14,0:17:0,45,255
-chr21	33379468	chr21:33379468:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:22:0,45,255	0/1:6,7:15:78,0,77	0/0:16,1:19:0,37,255
-chr21	33382245	chr21:33382245:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/1:18,11:30:109,0,234	0/0:27,1:28:0,64,255
-chr21	33384083	chr21:33384083:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,6,57	1/1:0,7:7:196,21,0	.
-chr21	33384265	chr21:33384265:M	GTTTTTTGTTTGTTGGTTGGTTTGTTTGTTTGTTT	<4.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:20,7:27:107,0,255	0/0:28,2:32:0,35,255	0/0:18,2:20:0,5,255
-chr21	33385978	chr21:33385978:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/1:17,9:27:81,0,222	0/0:18,0:19:0,55,255
-chr21	33388953	chr21:33388953:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,15,143	0/1:5,7:13:164,0,100	0/0:7,0:7:0,21,196
-chr21	33392702	chr21:33392702:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<12>	.	.	Motif=GT	GT:AD:DP:PL	0/0:16,0:18:0,50,255	0/1:8,8:17:98,0,81	0/0:23,0:25:0,73,255
-chr21	33398652	chr21:33398652:M	TGTGATGTGATGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:15,0:18:0,43,255	0/1:4,8:14:212,0,99	0/0:13,1:14:0,9,255
-chr21	33401595	chr21:33401595:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAATAAATAA	<14.8>,<15.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:3,5,0:8:73,0,35,82,57,162	1/1:0,6,0:6:109,18,0,109,18,109	0/2:9,0,5:15:102,92,229,0,173,229
-chr21	33405104	chr21:33405104:M	AAAAAAAAAAAAAAAAAAAAGAAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,2:11:4,31,255,0,160,130	0/1:1,11,1:15:255,0,12,170,19,168	0/2:6,0,3:10:24,44,210,0,113,88
-chr21	33406649	chr21:33406649:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,4:34:0,27,255	0/1:14,7:21:58,0,177	0/0:24,1:27:0,61,255
-chr21	33410167	chr21:33410167:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:17:87,0,115	1/1:2,22:26:255,41,0	0/0:14,0:15:0,41,250
-chr21	33416822	chr21:33416822:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:254,41,0	1/1:1,11:12:173,18,0	0/1:5,12:17:163,0,39
-chr21	33419460	chr21:33419460:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:25,13:39:134,0,255	0/1:25,24:50:255,0,255	0/0:42,0:42:0,124,255
-chr21	33421332	chr21:33421332:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,5:10:45,0,34	0/1:3,6:10:67,0,14	0/0:7,2:13:0,4,101
-chr21	33423829	chr21:33423829:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,0,14:24:255,253,255,0,182,219	1/2:0,17,7:25:255,129,60,249,0,226	0/1:16,14,1:32:171,0,208,196,255,255
-chr21	33428210	chr21:33428210:M	TTTTTTTTTTTTTTTT	<14>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,0,6:23:107,159,255,0,255,255	0/2:8,0,7:18:151,186,255,0,210,181	0/1:14,16,0:34:255,0,255,255,255,255
-chr21	33433790	chr21:33433790:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:4,24:30:255,16,0	0/1:21,21:44:255,0,255
-chr21	33437983	chr21:33437983:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,6:22:41,0,218	0/0:15,2:18:0,16,219	0/1:13,6:20:45,0,176
-chr21	33438732	chr21:33438732:M	TTTTTTTTTTTCTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,30:34:255,80,0	1/1:1,23:24:255,53,0	0/1:22,16:38:181,0,255
-chr21	33442012	chr21:33442012:M	TTTGTTTGCTTGTTTGTTTG	<4>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,40:40:255,118,0	0/1:20,26:46:255,0,239
-chr21	33442921	chr21:33442921:M	AAAAAAAAAAACAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:1,37:40:255,99,0	0/1:27,24:51:255,0,255
-chr21	33443893	chr21:33443893:M	TTTTTTTTTGTTTGTTTGTTTGTTTTTTT	<22>,<30>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,17:35:255,255,255,255,0,255	2/2:0,0,29:29:255,255,255,85,87,0	0/1:18,23,0:41:255,0,255,255,255,255
-chr21	33444804	chr21:33444804:M	AAAAAAAAAAAAAAAAAGAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:2:14,3,0	1/1:0,3:3:84,9,0	0/0:4,0:4:0,12,119
-chr21	33445084	chr21:33445084:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,2:16:0,12,207	0/1:7,3:12:34,0,82	0/0:14,0:14:0,41,237
-chr21	33445787	chr21:33445787:M	AAAAAAAAAAGGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:31:186,0,204	0/0:27,0:29:0,84,255	0/1:16,24:41:255,0,178
-chr21	33446214	chr21:33446214:M	TTTTTCTTTTATTTTTTTTATTTTTTATTTTTTATTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:207,0,255	0/1:6,12:20:255,0,108	0/0:32,0:34:0,101,255
-chr21	33446636	chr21:33446636:M	ACACACACACACACACACACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,3:16:8,0,189	0/1:13,5:18:37,0,180	0/0:17,1:19:0,38,255
-chr21	33447144	chr21:33447144:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,19:23:255,30,0	1/1:2,21:23:255,32,0	0/1:18,12:32:123,0,247
-chr21	33447682	chr21:33447682:M	ACACACACACACACACACACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,24,13:39:255,177,68,255,0,187	0/2:12,0,12:27:255,153,255,0,255,255	0/1:12,7,0:24:140,0,255,67,255,255
-chr21	33447720	chr21:33447720:M	ATATATATATATA	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,2:2:49,6,0	1/1:0,3:4:99,12,0	0/0:23,1:25:0,50,255
-chr21	33454103	chr21:33454103:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,3:5:103,52,38,30,0,21	0/1:2,5,1:8:71,0,10,53,17,99	0/1:3,4,0:7:49,0,31,58,51,131
-chr21	33457652	chr21:33457652:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:17:234,31,0	1/1:1,12:15:207,26,0	0/1:9,7:17:84,0,107
-chr21	33459668	chr21:33459668:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:16:177,0,8	1/1:0,9:9:154,26,0	0/1:13,6:22:60,0,176
-chr21	33464199	chr21:33464199:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:27:141,0,186	0/0:26,0:28:0,81,255	1/1:0,13:14:242,41,0
-chr21	33464805	chr21:33464805:M	AAAAAAAAAAAAAAAAAAAACAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:24:255,72,0	1/1:0,29:29:255,87,0	0/1:1,6:9:146,0,7
-chr21	33466781	chr21:33466781:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,50:50:255,148,0	1/1:1,36:37:255,91,0	0/1:16,31:47:255,0,161
-chr21	33472030	chr21:33472030:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:38:0,94,255	0/0:23,0:24:0,69,255	0/1:16,11:30:82,0,177
-chr21	33473458	chr21:33473458:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,1,5:13:64,80,213,0,75,84	0/2:10,2,3:19:35,36,201,0,100,146	0/1:8,4,0:13:46,0,105,81,120,240
-chr21	33473655	chr21:33473655:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:27:0,62,255	0/0:20,2:23:0,33,255	0/1:14,14:33:180,0,167
-chr21	33476761	chr21:33476761:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:53,9,0	1/1:0,4:5:66,11,0	0/1:2,2:5:20,0,30
-chr21	33483226	chr21:33483226:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:36,0,29	0/1:8,3:12:26,0,101	0/1:5,4:9:43,0,61
-chr21	33485003	chr21:33485003:M	TTGTTGTTGTTGTTGTTGTTGTT	<8.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:17,11:28:129,0,247	0/1:11,22:33:255,0,103	0/0:24,0:24:0,71,255
-chr21	33486707	chr21:33486707:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/1:9,7:17:70,0,113	0/0:18,3:24:0,16,255
-chr21	33492341	chr21:33492341:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:12:148,90,114,82,0,99	1/2:0,7,2:11:146,34,25,137,0,191	0/1:5,6,0:12:83,0,55,114,76,238
-chr21	33493267	chr21:33493267:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:2,31:34:255,64,0	0/1:24,18:42:204,0,255
-chr21	33494494	chr21:33494494:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:110,0,13	1/1:0,3:5:87,2,0	1/1:0,2:4:82,12,0
-chr21	33494613	chr21:33494613:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:12:11,0,118	0/1:10,5:19:58,0,127	0/0:20,2:24:0,32,255
-chr21	33496461	chr21:33496461:M	CTCTCTCTCTCTC	<7.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:22,16:39:193,0,255	0/1:17,8:25:72,0,235	0/1:16,13:29:159,0,216
-chr21	33498801	chr21:33498801:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:32:153,0,191	0/1:11,9:25:89,0,153	0/1:9,14:26:174,0,99
-chr21	33499432	chr21:33499432:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,12:31:255,218,131,255,0,237	1/2:0,14,5:21:255,87,26,255,0,207	0/1:8,12,0:23:255,0,182,219,209,255
-chr21	33499903	chr21:33499903:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:11:7,0,116	0/1:11,5:19:50,0,144	0/0:20,1:24:0,52,255
-chr21	33503184	chr21:33503184:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATT	<7.2>,<10.2>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:12,0,10:22:130,192,255,0,230,169	1/2:0,16,4:20:255,72,59,255,0,255	0/0:24,0,0:25:0,72,255,74,255,255
-chr21	33503371	chr21:33503371:M	TTTTTTTTTTTTTTTTTTTTT	<15>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,2:18:255,35,2,255,0,255	1/2:0,5,3:9:177,50,58,134,0,126	0/1:4,12,0:16:255,0,67,255,70,255
-chr21	33512290	chr21:33512290:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:9:98,0,1	0/1:3,2:5:19,0,36	0/1:4,4:10:63,0,40
-chr21	33513084	chr21:33513084:M	TGTGTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:5,4:12:90,0,113	0/1:6,8:16:174,0,138	0/1:5,7:13:163,0,99
-chr21	33516247	chr21:33516247:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:87,15,0	0/1:2,4:8:52,0,20	1/1:0,4:4:68,12,0
-chr21	33519553	chr21:33519553:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:14:101,0,48	0/0:13,2:16:0,4,177	0/1:3,8:12:103,0,26
-chr21	33519824	chr21:33519824:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:25:255,72,0	1/1:1,27:32:255,75,0	1/1:1,19:21:255,43,0
-chr21	33523968	chr21:33523968:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,0:2:5,0,5	0/0:3,0:4:0,11,61	0/1:4,3:7:30,0,47
-chr21	33528612	chr21:33528612:M	AAAAAAGAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:28:145,0,183	0/1:17,5:24:27,0,234	0/1:16,14:30:161,0,197
-chr21	33528757	chr21:33528757:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,21:35:255,0,98	0/0:24,2:26:0,42,255	0/1:10,12:28:156,0,127
-chr21	33529451	chr21:33529451:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:22,0,84	0/0:11,2:13:0,4,151	0/0:11,0:12:0,35,202
-chr21	33531570	chr21:33531570:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,6:24:25,0,126	0/1:15,4:28:6,0,139	0/0:19,3:26:0,14,202
-chr21	33533439	chr21:33533439:M	AAAAAAAAAAAAATAAATAAATAAATAAAAATAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2:9:12,0,54	0/1:2,7:10:65,0,1	0/1:6,3:10:14,0,53
-chr21	33538242	chr21:33538242:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:32,0,41	0/1:5,2:9:19,0,60	0/1:4,2:6:16,0,50
-chr21	33543531	chr21:33543531:M	CCCCTCCCCCTC	<2.2>	.	.	Motif=CCCCTC	GT:AD:DP:PL	1/1:0,37:37:255,102,0	1/1:0,31:31:255,86,0	1/1:0,36:36:255,100,0
-chr21	33547706	chr21:33547706:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:149,15,0	0/1:1,2:4:55,0,23	.
-chr21	33547891	chr21:33547891:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,11,13:26:255,190,180,195,0,143	1/2:0,14,17:34:255,254,204,255,0,185	0/1:16,15,1:32:255,0,255,255,255,255
-chr21	33549082	chr21:33549082:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,16:31:197,0,180	0/0:27,2:30:0,53,255	0/1:14,13:29:154,0,172
-chr21	33555095	chr21:33555095:M	GCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGC	<3.8>,<7.3>	.	.	Motif=GCCGCA	GT:AD:DP:PL	1/2:1,6,12:19:255,239,244,120,0,107	1/2:0,7,5:12:255,113,92,149,0,134	1/2:1,11,4:16:255,65,56,226,0,237
-chr21	33556712	chr21:33556712:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,11:21:149,0,85	0/1:7,4:12:43,0,85	0/1:12,8:23:85,0,156
-chr21	33558960	chr21:33558960:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:2:19,3,0	1/1:0,3:3:51,9,0	1/1:0,3:3:52,9,0
-chr21	33564862	chr21:33564862:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:9:79,0,19	0/0:2,0:2:0,6,33	0/0:2,0:3:0,9,46
-chr21	33572169	chr21:33572169:M	TATATTATATATTTATATATATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,19:19:255,56,0	1/1:0,3:3:53,9,0	1/1:0,16:17:255,47,0
-chr21	33577605	chr21:33577605:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<24>,<34>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,4:8:121,121,121,14,14,0	2/2:0,0,3:5:94,94,94,12,12,0	1/1:0,8,0:11:255,30,0,255,30,255
-chr21	33580240	chr21:33580240:M	ATGAATGAATGAATGAATGAATGAATGAATG	<6.8>	.	.	Motif=ATGA	GT:AD:DP:PL	0/1:10,13:23:183,0,126	0/1:12,8:20:86,0,159	0/1:8,12:20:167,0,92
-chr21	33583201	chr21:33583201:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:171,21,0	1/1:0,3:4:88,10,0	0/0:1,0:1:0,3,27
-chr21	33584015	chr21:33584015:M	TATATATATATATATATATATATATATATATA	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:16:254,5,0	1/1:0,3:5:98,13,0	0/1:2,8:13:204,0,29
-chr21	33585388	chr21:33585388:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:8:31,0,58	0/0:6,1:7:0,3,86	0/1:2,3:7:33,0,33
-chr21	33594639	chr21:33594639:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:7:42,0,32	0/0:4,0:5:0,3,56	0/1:2,2:6:28,0,27
-chr21	33597615	chr21:33597615:M	TTTTTGTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:255,0,255	0/1:18,10:28:202,0,255	0/1:21,11:32:225,0,255
-chr21	33599639	chr21:33599639:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,128,0	1/1:0,43:44:255,128,0	1/1:1,38:40:255,100,0
-chr21	33604529	chr21:33604529:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,11:12:181,17,0	1/1:2,9:13:138,3,0	0/1:7,7:16:95,0,78
-chr21	33615155	chr21:33615155:M	TTTTTTTTTTTTTTTTTT	<15>,<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,10,1:24:255,182,127,230,0,164,255,135,213,255	1/2:0,15,9,0:25:255,156,82,255,0,198,255,130,255,255	2/3:1,1,10,4:16:255,213,255,42,67,40,175,131,0,148
-chr21	33618289	chr21:33618289:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:5:0,15,86	0/1:3,3:8:32,0,33	0/1:7,2:10:8,0,93
-chr21	33627740	chr21:33627740:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:11:49,0,45	0/1:2,3:6:44,0,16	0/1:2,4:7:60,0,15
-chr21	33628604	chr21:33628604:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:28:255,79,0	1/1:0,27:29:255,84,0	1/1:1,23:26:255,59,0
-chr21	33629067	chr21:33629067:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:30:255,70,0	1/1:1,22:26:255,58,0	1/1:0,27:28:255,82,0
-chr21	33634881	chr21:33634881:M	ATATATATATATATATATATATATA	<10.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,15,12:28:255,169,150,254,0,194	1/2:0,3,3:6:122,44,35,52,0,35	1/2:0,22,12:35:255,182,113,255,0,255
-chr21	33635347	chr21:33635347:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:53,9,0	1/1:1,5:8:91,6,0	1/1:1,6:8:98,6,0
-chr21	33637761	chr21:33637761:M	ATATATATATATATATATATATATATATA	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:33,0:38:0,101,255	0/1:5,8:17:217,0,65	0/0:20,1:24:0,41,255
-chr21	33637789	chr21:33637789:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:41,2:43:0,86,255	0/1:7,12:21:208,0,99	0/1:13,5:23:56,0,238
-chr21	33638211	chr21:33638211:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:11:0,15,159	0/1:2,3:7:41,0,24	0/1:4,4:9:43,0,51
-chr21	33639826	chr21:33639826:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,7,1,3:12:218,119,138,175,46,236,126,0,190,213	1/2:0,12,7,1:22:255,130,163,229,0,255,255,104,255,255	0/0:9,0,0,0:9:0,26,163,26,163,163,27,187,187,255
-chr21	33644828	chr21:33644828:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,17:44:191,0,255	0/1:17,8:26:66,0,236	0/1:21,19:42:236,0,255
-chr21	33650031	chr21:33650031:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:31:0,74,255	0/1:9,3:12:9,0,97	0/0:24,0:25:0,71,255
-chr21	33655584	chr21:33655584:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,146	0/0:1,0:3:0,6,41	0/1:2,3:9:81,0,40
-chr21	33659706	chr21:33659706:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,4:6:94,0,13
-chr21	33669443	chr21:33669443:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,12:27:152,0,156	0/1:10,4:15:35,0,130	0/1:18,8:28:70,0,255
-chr21	33677343	chr21:33677343:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,79,255	0/0:29,1:32:0,76,255	0/1:20,7:28:42,0,255
-chr21	33681616	chr21:33681616:M	TTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTGTTTTGTTTTTGTTTT	<53>,<68>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,0,5:12:110,131,255,0,183,168	0/2:1,0,2:3:49,52,78,0,26,20	0/1:8,5,0:13:103,0,194,127,209,255
-chr21	33687231	chr21:33687231:M	AAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,15:32:185,0,223	0/1:12,17:29:215,0,127	0/0:28,1:29:0,67,255
-chr21	33687399	chr21:33687399:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,3,29	0/0:0,0:1:0,0,0	0/1:1,3:5:79,0,14
-chr21	33689968	chr21:33689968:M	AAAAAAAAAAAAAAATAATTAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,1:17:0,32,255	0/0:10,0:11:0,32,179	0/1:14,14:29:159,0,168
-chr21	33690600	chr21:33690600:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:26:170,0,170	0/1:19,8:27:63,0,255	0/0:26,0:26:0,77,255
-chr21	33697235	chr21:33697235:M	TTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:13:255,36,0	1/1:0,4:4:111,12,0	0/1:3,1:6:16,0,69
-chr21	33700952	chr21:33700952:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,12:24:255,255,255,201,0,255	1/2:0,9,7:19:255,179,169,153,0,224	1/2:0,11,7:18:255,180,152,187,0,255
-chr21	33703084	chr21:33703084:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,19,9:28:255,162,82,255,0,255	1/2:0,11,11:22:255,189,126,160,0,127	0/1:10,11,0:21:135,0,117,165,176,255
-chr21	33705111	chr21:33705111:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:14:55,0,99	0/0:7,1:9:0,9,110	0/0:3,0:3:0,9,51
-chr21	33711646	chr21:33711646:M	TGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGT	<23.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,18:29:255,255,239,175,0,97	0/1:6,9,0:16:223,0,122,160,100,220	0/2:9,1,10:20:128,130,255,0,138,99
-chr21	33713829	chr21:33713829:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,3:5:45,0,3
-chr21	33714623	chr21:33714623:M	TATATCTATATCTATATCTATA	<2.7>	.	.	Motif=TATATC	GT:AD:DP:PL	1/1:0,47:47:255,137,0	1/1:0,35:35:255,102,0	1/1:0,44:44:255,128,0
-chr21	33717730	chr21:33717730:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,6:23:51,0,243	0/1:16,20:37:255,0,183	0/1:24,18:42:213,0,255
-chr21	33724084	chr21:33724084:M	TGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGT	<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,17:30:255,255,239,177,0,153	1/2:1,17,14:32:255,232,159,240,0,224	0/1:23,16,0:40:182,0,255,254,255,255
-chr21	33725121	chr21:33725121:M	TTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTT	<30>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6,0:10:149,24,0,169,29,218	1/1:0,11,0:17:255,46,0,255,50,255	1/2:3,4,5:16:84,15,117,72,0,118
-chr21	33741895	chr21:33741895:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:7:86,0,60	0/1:7,3:10:45,0,158	0/0:5,0:7:0,17,145
-chr21	33748990	chr21:33748990:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:25:255,72,0	1/1:3,33:39:255,61,0	0/1:8,12:22:163,0,82
-chr21	33752825	chr21:33752825:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,13:31:140,0,230	0/1:12,12:27:134,0,145	0/0:38,1:40:0,99,255
-chr21	33763230	chr21:33763230:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:5:6,0,24	0/1:1,5:8:41,0,13	0/0:3,1:5:0,0,31
-chr21	33769700	chr21:33769700:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:34:198,0,225	0/1:17,21:38:255,0,187	0/0:33,1:35:0,84,255
-chr21	33770765	chr21:33770765:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,6:14:68,107,255,0,122,104	0/1:6,3,2:12:28,0,89,25,53,127	0/0:24,1,2:27:0,61,255,44,255,255
-chr21	33776387	chr21:33776387:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,13:32:147,0,213	0/1:10,5:18:38,0,133	0/1:16,6:24:45,0,219
-chr21	33776545	chr21:33776545:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:18:109,0,84	0/1:6,6:14:74,0,63	0/0:15,0:15:0,44,255
-chr21	33783692	chr21:33783692:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:30:122,0,223	0/1:8,13:23:178,0,71	0/1:21,10:32:94,0,255
-chr21	33784311	chr21:33784311:M	ACACACACACACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,17:29:255,0,218	0/1:7,13:21:255,0,129	0/1:6,15:23:255,0,106
-chr21	33795951	chr21:33795951:M	TTTTTTTTTTTTTTTTAATTTTTTATTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:255,209,182,30,29,0	1/2:2,7,15:24:255,221,189,67,0,73	1/2:0,8,5:13:247,88,51,119,0,104
-chr21	33798265	chr21:33798265:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,16:36:201,0,239	0/1:14,9:24:88,0,186	0/0:30,0:31:0,91,255
-chr21	33806048	chr21:33806048:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:112,12,0	0/1:12,5:19:87,0,255	0/1:10,5:17:93,0,237
-chr21	33813755	chr21:33813755:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/1:20,21:43:254,0,236	0/0:47,0:48:0,141,255
-chr21	33813824	chr21:33813824:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,8:25:74,0,239	0/1:13,12:25:136,0,153	0/0:38,1:41:0,99,255
-chr21	33840358	chr21:33840358:M	TTTTTTGTTTTTTAATTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:18,17:35:203,0,218	0/0:35,0:35:0,103,255
-chr21	33841938	chr21:33841938:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,3:4:42,53,90,0,15,6	1/2:1,6,3:13:125,51,73,87,0,137	0/0:14,1,1:16:0,29,240,29,219,240
-chr21	33842496	chr21:33842496:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:8,0,14:24:255,255,255,0,210,160	1/2:0,11,13:27:255,255,255,255,0,255	0/0:21,0,0:23:0,69,255,63,255,255
-chr21	33862165	chr21:33862165:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:29,3,0	1/1:0,0:2:28,6,0	1/1:0,4:7:131,16,0
-chr21	33867639	chr21:33867639:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:21:255,58,0	1/1:0,12:15:255,41,0	1/1:0,21:24:255,68,0
-chr21	33871430	chr21:33871430:M	AAAAAAACAAAAAAAAAAACAAAAAACAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,34:34:255,102,0	1/1:0,32:33:255,99,0
-chr21	33871740	chr21:33871740:M	AAAAAAAAAAAAAGAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,54:55:255,164,0	1/1:0,33:34:255,99,0	1/1:0,36:38:255,113,0
-chr21	33874157	chr21:33874157:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:51,9,0	1/1:0,3:3:49,9,0	0/1:2,3:6:35,0,19
-chr21	33874640	chr21:33874640:M	TTTTCTTTTTCTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:175,18,0	1/1:0,8:10:239,24,0	1/1:0,8:9:232,24,0
-chr21	33876234	chr21:33876234:M	TCTCTCTCTCTTTCTTCTCCTTCCTTCCTCTCTTCTTTTTCTCTCTTTCTTTCCTTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,18:18:255,54,0	1/1:0,27:27:255,81,0
-chr21	33876883	chr21:33876883:M	AGATATAGATATAGATGTAGATATAGATATAGATATAGA	<7.5>	.	.	Motif=AGATAT	GT:AD:DP:PL	1/1:0,16:16:255,47,0	1/1:0,20:20:255,59,0	1/1:0,24:24:255,71,0
-chr21	33877826	chr21:33877826:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,40:41:255,123,0	1/1:0,39:39:255,117,0	1/1:0,37:39:255,116,0
-chr21	33878009	chr21:33878009:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,9:23:255,102,34,153,0,86	1/2:0,11,28:39:255,255,187,128,0,11	1/2:0,16,12:30:255,135,46,195,0,108
-chr21	33881946	chr21:33881946:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:9:158,26,0	0/1:4,5:10:64,0,39	0/1:2,6:8:80,0,11
-chr21	33887320	chr21:33887320:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,39:43:255,117,0	0/1:15,22:38:255,0,171
-chr21	33887587	chr21:33887587:M	TTTTTTCTTTTTATTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:37:255,80,0	1/1:0,28:32:255,80,0	0/1:19,16:35:143,0,188
-chr21	33887944	chr21:33887944:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:26:255,58,0	1/1:0,43:43:255,126,0	0/1:24,21:46:243,0,255
-chr21	33895494	chr21:33895494:M	TGTGTGTGCGTGCGCGTGTTTGTGTGTGCATGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,14:14:242,41,0	0/1:12,7:19:70,0,155
-chr21	33908170	chr21:33908170:M	AAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:117,0,13	1/1:0,4:6:144,18,0	0/0:3,0:4:0,12,101
-chr21	33911663	chr21:33911663:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:2:0,1,2	0/1:7,3:10:20,0,86	0/0:1,0:3:0,6,27
-chr21	33914164	chr21:33914164:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,20:43:248,0,255	1/1:4,42:47:255,67,0	0/0:44,0:45:0,132,255
-chr21	33918442	chr21:33918442:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,22:38:255,0,142	1/1:0,32:33:255,97,0	0/0:25,2:27:0,43,255
-chr21	33921263	chr21:33921263:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:7,0,35	0/1:2,4:8:58,0,24	0/0:9,0:9:0,26,159
-chr21	33921419	chr21:33921419:M	AAAAAAAAAAAAAAAAAAACAAAAAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:10:50,0,57	1/1:0,11:13:201,37,0	0/0:6,0:6:0,18,102
-chr21	33925237	chr21:33925237:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:29:178,0,198	0/0:27,0:27:0,79,255	1/1:0,24:25:255,73,0
-chr21	33938189	chr21:33938189:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:8:166,45,30,87,0,65	2/2:1,1,6:8:95,74,95,6,6,0	1/2:1,6,5:12:196,56,63,85,0,69
-chr21	33940587	chr21:33940587:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:43:255,0,211	0/0:46,5:51:0,62,255	1/1:0,39:40:255,117,0
-chr21	33944306	chr21:33944306:M	AAAAAAAAAAAACAAAAAGAAAAAGAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8:18:95,0,132	0/1:9,8:19:87,0,115	1/1:0,30:30:255,88,0
-chr21	33945707	chr21:33945707:M	AAAAAAATAGAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:15:71,0,90	1/1:0,11:12:197,35,0	0/0:16,2:19:0,21,253
-chr21	33946576	chr21:33946576:M	TCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,18:34:134,0,108	0/1:14,15:29:106,0,93	1/1:2,32:34:255,69,0
-chr21	33952629	chr21:33952629:M	AAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:55,40,35,6,6,0	0/2:1,1,4:6:108,50,62,0,9,11	1/2:0,4,10:15:255,179,140,70,0,26
-chr21	33956189	chr21:33956189:M	AAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,3:9:162,52,65,85,0,104	1/2:0,1,4:8:153,125,121,28,0,8	2/2:0,0,7:7:208,208,208,21,21,0
-chr21	33956225	chr21:33956225:M	ACACACACACACACACACACACACACACACACACACACACGCACA	<20.5>,<21.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,12,5:18:255,255,255,141,141,106,209,209,0,255	0/3:8,0,1,5:14:111,135,255,120,252,228,0,202,116,202	1/2:0,12,6,0:18:255,88,52,206,0,156,255,104,207,255
-chr21	33960271	chr21:33960271:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,10:28:104,0,244	0/1:23,7:30:35,0,255	1/1:2,26:31:255,54,0
-chr21	33961657	chr21:33961657:M	AAAAAAAAAAAAAAAAGAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:12:36,0,107	0/1:2,3:6:35,0,19	1/1:1,6:8:94,6,0
-chr21	33965116	chr21:33965116:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2:41:0,74,255	0/1:19,12:31:121,0,244	0/0:45,0:49:0,143,255
-chr21	33965458	chr21:33965458:M	AATATAATAAATATAATAAATATA	<5.6>	.	.	Motif=AATAT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,8:8:255,24,0	1/1:0,32:32:255,96,0
-chr21	33971511	chr21:33971511:M	ACACACACACACACACACACACACACAC	<11>,<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,24,0:40:255,0,255,255,255,255	1/2:0,14,12:28:255,219,255,255,0,255	0/0:34,0,1:36:0,98,255,85,255,255
-chr21	33972215	chr21:33972215:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:22,18,30,0,18,23	1/1:0,3,0:3:51,9,0,51,9,51	1/2:0,2,7:9:201,120,96,30,0,9
-chr21	33974050	chr21:33974050:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACATATATACACACACACA	<33.5>,<39.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,2,3:5:108,80,74,34,0,43	1/1:0,3,0:3:49,9,0,58,9,90	2/2:0,0,0:2:3,3,3,1,1,0
-chr21	33976338	chr21:33976338:M	CACTCACTCACTCACTCACTCA	<3.5>,<4.5>	.	.	Motif=CACT	GT:AD:DP:PL	1/2:0,19,26:45:255,255,255,255,0,239	1/2:0,12,20:32:255,255,255,217,0,126	2/2:0,0,31:31:255,255,255,92,92,0
-chr21	33982429	chr21:33982429:M	ATTTTTATTTTCTATTTTTTTTTTTTTTTA	<4.8>	.	.	Motif=ATTTTT	GT:AD:DP:PL	0/1:10,10:20:141,0,141	0/1:10,10:22:149,0,137	0/0:19,1:21:0,41,255
-chr21	33989253	chr21:33989253:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:23,0,22	1/1:0,2:3:69,9,0	0/1:1,4:5:95,0,12
-chr21	34002127	chr21:34002127:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:11:35,0,70	0/0:13,2:20:0,17,208	0/0:11,2:16:0,10,178
-chr21	34007811	chr21:34007811:M	TGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,9:18:119,0,98	0/1:18,10:28:97,0,240	0/1:19,16:38:197,0,253
-chr21	34010553	chr21:34010553:M	AAAAAAAAATAAAAAAATAAAAATATAAAATAAAAAATAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12:30:142,0,255	0/1:6,13:19:178,0,52	0/1:9,12:21:162,0,107
-chr21	34012002	chr21:34012002:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,1,30:32:255,255,255,67,65,0	0/2:8,1,8:17:150,92,152,0,93,152	1/2:3,9,6:20:156,21,28,39,0,109
-chr21	34017396	chr21:34017396:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,20:40:255,0,255	0/1:17,23:43:255,0,202	0/0:33,2:35:0,66,255
-chr21	34026119	chr21:34026119:M	ATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCT	<19.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:6,0:6:0,18,113	0/0:8,0:8:0,24,143	0/1:9,4:13:35,0,127
-chr21	34029557	chr21:34029557:M	AAAAAAAAAAAATAAAATAAAAATAAAAATAAAAATAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:164,0,178	0/1:5,9:18:211,0,98	0/0:24,0:25:0,75,255
-chr21	34030496	chr21:34030496:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:41:226,0,255	1/1:4,28:33:255,26,0	0/0:46,3:49:0,90,255
-chr21	34044971	chr21:34044971:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6:17:68,0,134	0/0:10,0:12:0,35,194	1/1:0,12:12:215,35,0
-chr21	34045613	chr21:34045613:M	ATAATAATAATAATA	<6>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:20,19:39:252,0,255	0/0:41,0:41:0,121,255	1/1:1,43:44:255,111,0
-chr21	34047500	chr21:34047500:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,2:31:0,51,255	0/1:14,5:20:38,0,185	0/0:23,2:27:0,42,255
-chr21	34049832	chr21:34049832:M	ACACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,7,1:9:216,24,0,140,9,117	1/2:0,3,8:12:197,110,98,60,0,27	.
-chr21	34051025	chr21:34051025:M	ACACACACACACACACACACATACACACACACACACACAGACATACACACACACACA	<24.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,1,17:18:255,255,255,54,35,0	0/2:9,0,11:21:254,184,255,0,240,208	1/2:0,18,10:29:255,173,90,255,0,243
-chr21	34051448	chr21:34051448:M	TAAAAATAAAAA	<1.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:22,23:45:255,0,255	1/1:0,45:45:255,135,0
-chr21	34053014	chr21:34053014:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:19:71,0,161	1/1:0,19:20:255,58,0	0/0:16,3:19:0,3,230
-chr21	34053864	chr21:34053864:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:77,9,0	0/1:1,3:5:65,0,15	1/1:0,2:2:49,6,0
-chr21	34055336	chr21:34055336:M	CCTGGGCCTGGG	<2.2>	.	.	Motif=CCTGGG	GT:AD:DP:PL	1/1:0,24:24:255,66,0	1/1:0,33:33:255,91,0	1/1:0,32:32:255,89,0
-chr21	34055867	chr21:34055867:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,28	1/1:0,3:4:72,1,0	0/1:1,1:4:19,0,32
-chr21	34056514	chr21:34056514:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3:18:42,0,255	0/1:4,5:10:121,0,80	0/1:13,4:19:55,0,255
-chr21	34061096	chr21:34061096:M	AAAAAAAAAAAAAAAGAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,8,3:18:209,87,68,148,0,222	1/2:0,7,8:18:255,198,200,114,0,167	1/2:1,5,1:13:80,18,39,64,0,138
-chr21	34061108	chr21:34061108:M	AAAGAAAAGAAAGAAA	<3.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,16:16:255,47,0	1/1:0,19:19:255,55,0	1/1:0,12:12:197,35,0
-chr21	34070391	chr21:34070391:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,15:43:152,0,255	0/1:21,34:55:255,0,206	0/1:14,17:31:217,0,161
-chr21	34084280	chr21:34084280:M	GTGCTTGTGCTT	<2.2>	.	.	Motif=GTGCTT	GT:AD:DP:PL	0/1:26,19:45:255,0,255	0/1:28,19:47:255,0,255	0/0:43,0:43:0,129,255
-chr21	34086512	chr21:34086512:M	TGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,10:29:109,0,249	1/1:0,33:35:255,100,0	0/1:18,18:37:226,0,217
-chr21	34092126	chr21:34092126:M	ATATATATATATATA	<8.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,18:33:255,255,249,245,0,191	1/1:0,40,0:40:255,118,0,255,118,255	1/2:0,19,17:36:255,255,212,255,0,250
-chr21	34093239	chr21:34093239:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6:20:48,0,191	0/0:17,0:17:0,50,255	0/1:16,9:27:81,0,213
-chr21	34103316	chr21:34103316:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,17:34:212,0,183	0/1:20,14:36:137,0,255	0/1:8,27:37:255,0,37
-chr21	34116179	chr21:34116179:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGT	<21.5>,<22.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,6,0,4:13:255,111,100,228,120,219,168,0,117,166	0/3:3,0,0,7:12:207,217,255,217,255,255,0,80,50,56	1/2:0,10,8,0:19:255,115,82,182,0,130,255,137,183,255
-chr21	34136137	chr21:34136137:M	TTTTTCTTTTCTTTTTTCTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:21:0,43,255	0/0:34,0:34:0,100,255	0/1:10,15:25:200,0,109
-chr21	34152398	chr21:34152398:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,1:7:53,8,6,49,0,118	1/2:2,2,3:8:55,38,56,9,0,66	0/1:4,2,0:7:6,0,41,23,50,127
-chr21	34156610	chr21:34156610:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:20:255,39,0	0/1:9,9:19:102,0,111	1/1:0,34:36:255,105,0
-chr21	34156782	chr21:34156782:M	AAAAAAAATAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,8:20:158,0,255	0/1:14,14:28:255,0,255	0/1:32,17:50:255,0,255
-chr21	34156832	chr21:34156832:M	TTTTCTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:29:193,0,165	0/1:22,24:46:255,0,252	0/1:28,19:48:214,0,255
-chr21	34157173	chr21:34157173:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<18>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,12,0:22:255,0,206,218,244,255	0/1:11,17,0:28:255,0,231,255,255,255	0/2:9,1,15:27:255,250,255,0,235,210
-chr21	34164894	chr21:34164894:M	TTTTTTTTTTTTCTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:23:159,0,129	0/1:16,11:29:111,0,219	0/1:14,11:26:135,0,181
-chr21	34169333	chr21:34169333:M	TTATTTATTTATTTATTTATTTATTTAT	<6>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,35:35:255,103,0	1/1:0,35:35:255,103,0
-chr21	34169520	chr21:34169520:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:20:255,59,0	1/1:0,16:22:255,59,0	1/1:0,14:17:255,50,0
-chr21	34173737	chr21:34173737:M	AACAACAACAACAACAACAACAACAACAACAACAACAACA	<12.3>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,28:30:255,88,0	1/1:0,16:16:255,47,0	1/1:0,32:32:255,94,0
-chr21	34190143	chr21:34190143:M	CACACACACACACACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/1:16,21:38:255,0,255	0/1:30,11:41:255,0,255	1/1:0,39:41:255,123,0
-chr21	34193227	chr21:34193227:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:10,20:30:255,0,188	0/0:3,0:3:0,9,83	0/1:7,6:13:125,0,155
-chr21	34196837	chr21:34196837:M	ATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,19:35:255,0,204	0/1:16,10:26:104,0,213	0/0:40,0:40:0,118,255
-chr21	34202389	chr21:34202389:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>,<25.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,6,5,3:17:255,74,42,85,16,53,229,0,11,223	1/2:0,8,6,0:15:255,69,28,91,0,49,255,69,91,255	0/3:6,0,0,10:22:247,255,255,255,255,255,0,183,160,148
-chr21	34202433	chr21:34202433:M	GAGAGAGAGAGAGAGAGAAAGAG	<13.5>,<67.5>	.	.	Motif=GA	GT:AD:DP:PL	1/2:0,1,5:7:83,49,43,37,0,27	0/2:11,0,7:18:35,68,255,0,236,255	0/1:8,5,0:14:74,0,143,110,176,255
-chr21	34203756	chr21:34203756:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,15:36:176,0,255	0/1:13,15:28:181,0,146	0/0:29,0:29:0,85,255
-chr21	34207705	chr21:34207705:M	ACACACACACACACACACACACACACACACACACACACACACAC	<18>,<21>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,7:29:255,129,127,255,0,255	1/2:0,11,5:19:255,91,102,255,0,255	1/1:0,19,0:23:255,66,0,255,66,255
-chr21	34210825	chr21:34210825:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:1,38:40:255,97,0	1/1:2,45:48:255,101,0
-chr21	34213151	chr21:34213151:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,2,5:11:82,41,125,0,27,35	1/2:2,3,4:10:80,11,67,5,0,25	1/2:0,4,8:12:224,119,107,70,0,36
-chr21	34221642	chr21:34221642:M	ACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/0:41,0:43:0,128,255	0/1:17,14:32:255,0,255	0/0:41,0:44:0,131,255
-chr21	34224729	chr21:34224729:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:6,0,42	1/1:0,4:4:68,12,0	0/1:3,5:9:61,0,38
-chr21	34224877	chr21:34224877:M	TTTATTTATTTATTTATTTATTTATTTA	<8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:12,14:26:178,0,142	0/0:39,0:39:0,115,255
-chr21	34228482	chr21:34228482:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	<13.5>,<14.5>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:1,10,12:23:255,207,163,145,0,135	1/1:1,22,0:23:255,50,0,255,67,255	0/2:15,1,12:28:255,204,255,0,255,255
-chr21	34236881	chr21:34236881:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/1:19,18:39:210,0,230	0/0:39,1:42:0,105,255
-chr21	34239301	chr21:34239301:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,93	1/1:1,9:10:132,12,0	0/1:4,4:8:44,0,45
-chr21	34249910	chr21:34249910:M	AAAAAAAAAGAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:24,13:37:124,0,255	0/0:43,0:44:0,129,255
-chr21	34256624	chr21:34256624:M	CACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,10:24:198,0,247	0/0:37,0:42:0,122,255	0/1:14,13:32:255,0,255
-chr21	34260532	chr21:34260532:M	TATATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,11:32:109,0,255	0/0:3,0:5:0,8,51	0/1:10,9:19:106,0,124
-chr21	34271310	chr21:34271310:M	CACACACACACACACACACACACACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/0:32,0:34:0,101,255	0/1:17,10:27:199,0,255	0/0:34,0:36:0,107,255
-chr21	34282247	chr21:34282247:M	AAAAAAAAAAAAAAAGCAAAAAAACAGAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,44,255	0/1:9,8:18:88,0,107	0/0:10,1:15:0,22,191
-chr21	34301962	chr21:34301962:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:26:255,77,0	0/1:7,2:11:24,0,178	1/1:0,17:21:255,61,0
-chr21	34302299	chr21:34302299:M	TTTTTTTTTCTTTTTTTTTTTTTTCTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,17:19:255,37,0	0/1:8,12:21:146,0,86	1/1:1,23:25:255,55,0
-chr21	34317719	chr21:34317719:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,44:45:255,114,0	0/1:20,18:39:204,0,249	1/1:1,41:42:255,105,0
-chr21	34321893	chr21:34321893:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,3:17:4,0,204	0/1:9,6:15:60,0,110	0/1:9,7:16:77,0,112
-chr21	34324973	chr21:34324973:M	TATATATATATACACATATATAT	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,19:27:255,49,0	0/1:12,5:18:52,0,164	1/1:0,13:15:255,44,0
-chr21	34324995	chr21:34324995:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,3,20:30:255,255,225,78,38,0	1/2:1,8,8:22:255,70,37,66,0,63	2/2:0,5,14:22:255,185,122,64,6,0
-chr21	34333503	chr21:34333503:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:19:255,37,0	1/1:1,14:16:223,30,0	1/1:0,19:22:255,61,0
-chr21	34341186	chr21:34341186:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:12:151,14,0	0/1:5,8:15:111,0,42	0/1:4,12:16:162,0,23
-chr21	34341979	chr21:34341979:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:23:255,67,0	0/1:10,15:26:189,0,100	1/1:2,21:28:255,45,0
-chr21	34349071	chr21:34349071:M	TAAATAAATAAATAAATAAATAAATAAATAAATAA	<7.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:20,14:34:171,0,255	1/1:0,15:15:255,44,0	0/1:19,18:37:230,0,249
-chr21	34355694	chr21:34355694:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,30:31:255,73,0	1/1:0,24:25:255,73,0
-chr21	34357176	chr21:34357176:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:58,11,0	0/1:2,0:6:14,0,20	0/1:1,6:9:78,0,5
-chr21	34363026	chr21:34363026:M	AAAACAACAACAACAAACAAAAAC	<4.5>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:35,0:35:0,105,255	0/1:12,9:21:166,0,241	0/0:38,0:38:0,114,255
-chr21	34364773	chr21:34364773:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:31:255,72,0	0/1:10,12:23:143,0,116	1/1:0,19:19:255,56,0
-chr21	34368198	chr21:34368198:M	CACACACACACACACACACACACACACACACA	<17>	.	.	Motif=CA	GT:AD:DP:PL	0/0:13,1:14:0,27,137	0/0:13,0:13:0,35,145	0/1:7,3:10:7,0,52
-chr21	34368230	chr21:34368230:M	ATATATATATATATATATATATATATATATATGTATGTTATATATATGTATGTTATATATAT	<28>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,5:9:110,0,49	1/1:0,0:1:14,3,0	0/1:3,5:8:101,0,53
-chr21	34374051	chr21:34374051:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:12:80,0,53	0/1:10,3:14:10,0,137	0/1:5,8:13:99,0,47
-chr21	34393139	chr21:34393139:M	ACACACACACACACACACACACCGCACACACACACA	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,251	0/1:12,5:18:36,0,171	0/0:13,1:15:0,25,231
-chr21	34403368	chr21:34403368:M	AAAAAAAGAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:21:110,0,168	0/1:7,6:13:70,0,88	0/1:10,10:20:127,0,127
-chr21	34403832	chr21:34403832:M	TTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:11:132,0,107	0/1:5,7:12:154,0,103	0/1:8,15:23:255,0,155
-chr21	34414213	chr21:34414213:M	CACACACACGCGCACACACACACACACACACACACACACACACACACACA	<24>,<26>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,1,4:7:51,52,109,0,13,26	1/2:0,5,1:7:91,16,7,91,0,131	0/0:11,2,1:14:0,6,168,23,148,195
-chr21	34418470	chr21:34418470:M	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	<6.2>,<9.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/2:0,3,6:9:179,114,150,80,0,62	0/1:3,3,0:6:72,0,71,80,54,126	1/2:0,5,1:6:147,19,12,131,0,128
-chr21	34431453	chr21:34431453:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:28:129,0,240	0/1:11,15:26:196,0,120	0/1:8,8:16:103,0,101
-chr21	34439432	chr21:34439432:M	TGTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,7:14:89,0,88	0/1:5,5:11:59,0,58	0/1:6,8:14:105,0,67
-chr21	34444562	chr21:34444562:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,6,39	0/0:6,0:9:0,26,206	0/1:4,4:9:100,0,91
-chr21	34455183	chr21:34455183:M	AAAAAAAAAAAAAAAGAAACAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:88,0,21	0/1:3,11:17:145,0,5	0/1:2,5:10:59,0,22
-chr21	34469031	chr21:34469031:M	AAACAAACAAACAAACA	<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,9:9:252,27,0	0/1:10,8:18:172,0,228
-chr21	34477050	chr21:34477050:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,15:16:255,28,0	1/1:0,22:22:255,65,0	0/1:12,10:22:126,0,161
-chr21	34490963	chr21:34490963:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,255	0/0:14,0:14:0,41,252	0/1:12,9:21:106,0,161
-chr21	34491139	chr21:34491139:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:4:0,0,0	1/1:0,7:7:210,21,0	0/0:1,0:4:0,3,29
-chr21	34519363	chr21:34519363:M	TTTTCTTTTCTTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<53>,<54>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:12,15,41,0,18,12	1/2:0,3,6:9:161,85,76,50,0,25	2/2:0,0,5:6:76,79,88,6,15,0
-chr21	34522189	chr21:34522189:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,3:38:0,55,255	0/0:28,2:33:0,57,255	0/1:17,20:40:255,0,202
-chr21	34523785	chr21:34523785:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,37:37:255,109,0	0/1:25,19:44:221,0,255
-chr21	34527855	chr21:34527855:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:29:0,72,255	0/0:25,0:27:0,78,255	0/1:16,13:33:255,0,255
-chr21	34528956	chr21:34528956:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,2:46:0,98,255	0/0:46,2:48:0,106,255	0/1:21,23:45:255,0,255
-chr21	34532964	chr21:34532964:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,13,15:30:255,255,255,217,0,255	2/2:1,0,20:23:255,255,255,46,54,0	1/2:1,11,7:21:255,116,153,187,0,255
-chr21	34546374	chr21:34546374:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/1:30,12:43:81,0,255	0/0:38,3:41:0,67,255
-chr21	34556066	chr21:34556066:M	AAATAAATAAATAAATAAATAAATAAATAAATAATTAAA	<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:5,4:9:85,0,112	1/1:0,6:6:166,18,0	0/0:12,0:12:0,36,255
-chr21	34556109	chr21:34556109:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,58,0	1/1:1,7:9:112,9,0	1/1:1,15:17:255,32,0
-chr21	34556430	chr21:34556430:M	AATAATAATAATAATAATAATAATAATAATA	<11.3>,<12.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/2:13,0,12:25:255,227,255,0,244,255	0/0:19,0,0:20:0,58,255,59,255,255	1/2:0,10,8:20:255,159,103,169,0,140
-chr21	34563755	chr21:34563755:M	AAAAAAAAAAAAAAAAA	<13>,<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,6,2,4:16:247,71,107,82,57,76,108,0,39,75	2/3:0,0,3,0:5:69,31,50,1,18,6,25,22,0,16	1/3:0,4,0,3:7:155,49,37,67,27,48,76,0,36,56
-chr21	34563795	chr21:34563795:M	AGAGAGAGAGAGAGAGAGAGAGAGAG	<14>,<15>,<16>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,3,12,7:22:255,234,179,72,42,16,128,66,0,96	1/3:0,2,2,2:6:81,43,28,20,4,9,25,0,4,28	0/1:2,3,2,0:8:33,0,2,4,0,33,32,17,50,98
-chr21	34583179	chr21:34583179:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:62,0,88	0/0:16,2:19:0,21,248	1/1:0,18:19:255,53,0
-chr21	34601818	chr21:34601818:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,1:8:0,6,100	0/1:5,3:8:27,0,61	0/0:14,0:18:0,30,243
-chr21	34605922	chr21:34605922:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2,0:9:31,0,158,32,153,177	0/0:12,0,0:15:0,44,255,42,255,255	1/2:0,3,7:10:253,119,91,52,0,23
-chr21	34619211	chr21:34619211:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:41:0,120,255	0/0:38,1:41:0,100,255	0/1:18,20:39:255,0,214
-chr21	34625574	chr21:34625574:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:45:0,114,255	0/0:23,2:26:0,42,255	0/1:17,14:34:171,0,204
-chr21	34635885	chr21:34635885:M	TTTTTTTTTTTTTTTTTCTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,3:16:0,1,139	0/0:18,1:21:0,45,255	0/1:10,9:21:84,0,91
-chr21	34644138	chr21:34644138:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:61,40,34,6,6,0	1/2:0,1,3:5:118,58,46,17,0,2	1/2:0,4,1:5:140,17,2,67,0,53
-chr21	34664881	chr21:34664881:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:32:0,94,255	0/0:14,0:14:0,41,241	0/1:19,16:36:190,0,233
-chr21	34666297	chr21:34666297:M	TTATTTTATTTTTATTTTTTTT	<4.6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/0:44,2:47:0,92,255	0/1:11,23:34:255,0,152
-chr21	34671122	chr21:34671122:M	AAAAAAAAAAAAAAAAAAAAA	<14>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,2:8:56,72,159,0,72,56	2/2:0,0,6:8:161,173,195,21,21,0	0/1:4,10,0:17:255,0,89,255,89,255
-chr21	34675253	chr21:34675253:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1,0:12:0,17,182,35,185,208	0/1:12,4,0:16:22,0,160,68,172,255	0/2:7,1,3:11:21,35,157,0,87,102
-chr21	34678276	chr21:34678276:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:14:0,22,203	0/0:11,2:13:0,4,156	0/1:11,11:25:141,0,132
-chr21	34691553	chr21:34691553:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,232	1/1:1,35:37:255,81,0	0/1:13,22:38:255,0,146
-chr21	34693971	chr21:34693971:M	TTTTCTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,21:27:255,0,56	0/1:1,11:17:255,0,12	0/0:7,0:15:0,27,234
-chr21	34694136	chr21:34694136:M	TTTTTTTTTTTTTTTTT	<16>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,1,2:12:21,33,167,0,144,243	2/2:0,0,3:3:84,84,84,9,9,0	0/1:15,6,0:21:45,0,206,106,255,255
-chr21	34699416	chr21:34699416:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,2,9:19:128,90,241,0,68,63	1/2:2,6,12:21:255,134,164,73,0,50	0/2:4,2,3:9:48,10,102,0,34,43
-chr21	34700447	chr21:34700447:M	AAAAAAAAAAAAAAAAGAAAAGAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:20,0,97	1/1:0,3:3:84,9,0	0/0:5,0:6:0,18,157
-chr21	34707438	chr21:34707438:M	CACACACACACACACACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:12,11:23:239,0,255	1/1:0,36:36:255,108,0	0/0:29,0:32:0,93,255
-chr21	34711517	chr21:34711517:M	AAATAAACAAACAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<12>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	2/2:0,0,14:14:255,255,255,41,41,0	1/2:0,5,5:10:205,77,62,90,0,62	0/2:9,0,11:20:149,176,255,0,167,112
-chr21	34714685	chr21:34714685:M	AAAAAAACAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,0:10:0,29,167	0/0:13,0:16:0,46,255	0/1:5,6:11:76,0,57
-chr21	34716832	chr21:34716832:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:7,6:17:89,0,111	1/1:0,17:21:255,61,0	0/0:23,0:25:0,63,255
-chr21	34716863	chr21:34716863:M	CACACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,7:20:38,0,86	0/1:11,9:22:51,0,78	0/0:20,0:22:0,60,255
-chr21	34720274	chr21:34720274:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5,0:17:41,0,169,89,184,255	0/2:14,1,7:24:72,118,255,0,185,183	0/1:11,2,0:14:6,0,155,44,164,224
-chr21	34725632	chr21:34725632:M	TTTTTTTTTTGTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:18:19,0,131	1/1:1,18:20:231,40,0	0/0:24,0:24:0,68,255
-chr21	34739954	chr21:34739954:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,16:33:223,0,186	1/1:3,38:41:255,67,0	0/0:42,1:44:0,111,255
-chr21	34740525	chr21:34740525:M	ATCCATCCATCCATCCATCCATCCATCCACTCATCAATTTGCCCCATCGTCCATCCATCCATCCATCCATC	<18.8>	.	.	Motif=ATCC	GT:AD:DP:PL	0/1:2,6:8:89,0,14	0/0:3,0:3:0,9,53	0/0:10,0:10:0,29,184
-chr21	34747424	chr21:34747424:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10:22:117,0,153	0/1:13,14:30:178,0,140	0/0:20,1:23:0,49,255
-chr21	34748558	chr21:34748558:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGT	<24>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,8:16:91,0,89	0/1:12,8:20:73,0,138	0/0:19,0:21:0,61,255
-chr21	34753378	chr21:34753378:M	ACACACACACACACACACACAC	<12>,<13>	.	.	Motif=AC	GT:AD:DP:PL	0/2:5,1,8:16:114,68,85,0,41,63	0/1:12,7,1:20:27,0,67,46,108,238	0/0:24,0,0:28:0,70,255,80,255,255
-chr21	34753399	chr21:34753399:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<27.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:2,0:6:11,0,63	1/1:0,3:3:80,9,0	1/1:0,3:8:99,4,0
-chr21	34757755	chr21:34757755:M	TTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:5:128,127,127,15,15,0	1/2:0,7,2:11:255,65,41,198,0,188	2/2:0,0,5:5:163,163,162,15,15,0
-chr21	34764477	chr21:34764477:M	TCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,29:31:255,93,0	0/1:8,8:17:168,0,187	1/1:0,34:37:255,111,0
-chr21	34764606	chr21:34764606:M	AAATAAAATATAAATAAATAAATAAATAAATAAATACATTAAAAAAATAAA	<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,20:20:255,59,0	0/1:6,11:17:148,0,58	1/1:0,29:29:255,86,0
-chr21	34764702	chr21:34764702:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:6:66,0,0	0/0:2,0:3:0,9,47	0/1:2,0:5:14,0,23
-chr21	34767335	chr21:34767335:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:25:255,48,0	0/1:8,11:22:137,0,88	0/1:4,18:22:255,0,6
-chr21	34772764	chr21:34772764:M	CTTTCTTTCTTTC	<6.2>	.	.	Motif=CTTT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	0/1:24,15:39:255,0,255	1/1:0,38:39:255,117,0
-chr21	34773326	chr21:34773326:M	TGTGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,14:31:255,0,255	0/1:25,14:41:255,0,255	0/1:18,17:38:255,0,255
-chr21	34774464	chr21:34774464:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,7,15:28:255,255,255,166,0,104	0/1:6,6,0:16:127,0,139,135,147,255	1/2:0,9,11:23:255,255,255,206,0,164
-chr21	34776527	chr21:34776527:M	TTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:97,12,0	0/0:3,0:5:0,11,103	.
-chr21	34793707	chr21:34793707:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:222,0,185	0/1:13,11:26:139,0,153	0/1:25,5:30:3,0,255
-chr21	34804743	chr21:34804743:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:15:38,0,138	0/1:4,9:17:106,0,61	0/1:7,3:13:37,0,98
-chr21	34820645	chr21:34820645:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,15:28:202,0,140	0/0:30,0:31:0,91,255	0/1:13,11:26:123,0,176
-chr21	34823431	chr21:34823431:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,11:17:255,200,154,87,0,38	2/2:0,1,12:13:255,219,183,39,21,0	1/2:0,6,18:25:255,255,235,112,0,41
-chr21	34842493	chr21:34842493:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,17	0/1:2,4:6:47,0,15	1/1:0,1:3:36,8,0
-chr21	34844581	chr21:34844581:M	AATGAATGAGTGAGTGAGTGAATGAATGAATGA	<7.2>	.	.	Motif=AATG	GT:AD:DP:PL	0/1:7,9:20:110,0,74	0/1:16,21:38:242,0,156	0/0:24,0:24:0,70,255
-chr21	34847918	chr21:34847918:M	TTTTTTTTTTCTTCTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:35:193,0,252	0/1:17,17:34:199,0,200	0/0:41,0:41:0,121,255
-chr21	34850028	chr21:34850028:M	AACAACAACAACAA	<3.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:22,17:45:255,0,255	0/1:14,17:33:249,0,169	0/0:38,0:38:0,112,255
-chr21	34852170	chr21:34852170:M	AAAACAAAACAAAACAAAACAAAACAAAACAA	<5.4>,<7.4>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:7,16,0:23:243,0,68,255,116,255	1/2:0,18,13:31:255,231,255,255,0,255	0/2:13,0,18:32:248,255,255,0,211,157
-chr21	34853816	chr21:34853816:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,9:20:98,0,119	0/1:12,16:29:181,0,117	1/1:2,18:21:255,27,0
-chr21	34860519	chr21:34860519:M	GTGTGTCTGTGCGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,24:25:255,55,0	0/1:14,9:23:93,0,182	0/1:21,15:37:168,0,255
-chr21	34865275	chr21:34865275:M	TGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:5,0:6:0,18,156	0/0:3,0:5:0,9,88	1/1:0,3:4:84,9,0
-chr21	34871847	chr21:34871847:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:19:255,0,135	0/0:21,0:22:0,63,255	0/1:7,20:27:255,0,112
-chr21	34874124	chr21:34874124:M	TCTCTCTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:14,22:36:255,0,255	0/1:25,24:53:255,0,255	0/0:21,0:21:0,63,255
-chr21	34874678	chr21:34874678:M	AAAAAAAAAACAACAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,16:29:214,0,158	0/1:15,13:28:148,0,183	0/0:32,0:33:0,97,255
-chr21	34876851	chr21:34876851:M	TTTCTTTTTCTTTTTTCTTTTT	<2.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:11,21:32:255,0,214	0/1:21,20:41:255,0,255	0/0:41,0:41:0,123,255
-chr21	34878345	chr21:34878345:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10,0:20:108,0,81,162,114,255	1/2:3,12,5:20:158,36,83,139,0,255	0/0:13,2,0:17:0,4,155,44,164,222
-chr21	34878361	chr21:34878361:M	ATATATATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:30,0:32:0,95,255	0/0:23,0:26:0,76,255	0/1:11,7:22:137,0,232
-chr21	34882691	chr21:34882691:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,31:46:255,0,255	0/1:15,23:42:255,0,255	0/0:32,2:34:0,37,255
-chr21	34894881	chr21:34894881:M	ACACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,3,1:4:103,25,17,78,0,75	0/1:10,8,0:19:191,0,238,221,255,255	0/2:4,0,4:9:88,105,222,0,106,89
-chr21	34909589	chr21:34909589:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,2:13:0,4,148	0/0:7,0:8:0,21,116	0/1:3,3:6:33,0,33
-chr21	34928962	chr21:34928962:M	GGGGGGGGGGG	<13>	.	.	Motif=G	GT:AD:DP:PL	1/1:2,12:21:255,10,0	1/1:1,9:14:225,16,0	0/1:3,14:20:255,0,17
-chr21	34937321	chr21:34937321:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,3,3:9:65,7,35,0,8,67	0/1:5,3,2:10:43,0,56,9,50,127	0/1:4,6,0:11:75,0,40,78,60,177
-chr21	34964488	chr21:34964488:M	AAAAAAAAAAAAAAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:6,7:14:82,0,65	0/1:14,10:24:105,0,178
-chr21	34971505	chr21:34971505:M	CCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACCACCATC	<12>,<14>	.	.	Motif=CCAT	GT:AD:DP:PL	0/0:20,0,0:20:0,59,255,59,255,255	0/1:5,11,0:16:151,0,43,194,77,255	0/2:13,0,9:23:101,165,255,0,216,188
-chr21	34976129	chr21:34976129:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:38:255,0,155	0/0:32,2:35:0,67,255	0/1:17,20:39:255,0,192
-chr21	34978924	chr21:34978924:M	ACACACACACAGATACACACACACACACACACACACACACACACACACACACACACA	<29.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6,0:7:101,18,0,106,6,163	2/2:0,0,6:8:204,188,180,24,21,0	0/1:1,4,0:7:51,0,2,65,17,132
-chr21	34982398	chr21:34982398:M	GTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,16:17:255,51,0	1/1:0,25:29:255,83,0	1/1:0,22:22:255,66,0
-chr21	34985868	chr21:34985868:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:14,3,0	0/1:0,0:2:0,0,0	1/1:0,4:5:126,15,0
-chr21	34991545	chr21:34991545:M	GATGATGATGATGATGATGATGATGATGATGGTGATGATGA	<12.7>	.	.	Motif=GAT	GT:AD:DP:PL	1/1:1,27:30:255,66,0	1/1:0,21:21:255,62,0	1/1:0,27:29:255,85,0
-chr21	34992675	chr21:34992675:M	AAAAAAAAAAAAAAGAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:20:196,0,50	0/1:12,11:25:128,0,143	1/1:1,22:26:255,58,0
-chr21	34995436	chr21:34995436:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,89	0/0:1,0:3:0,5,27	0/1:1,3:6:48,0,3
-chr21	35001309	chr21:35001309:M	TATATATATATATATATATATATATA	<8>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,26,17:44:255,255,255,255,0,255	1/2:0,23,9:33:255,157,173,255,0,255	1/1:1,32,0:33:255,69,0,255,87,255
-chr21	35002383	chr21:35002383:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTTATTTATTTATTTA	<13.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,8:10:236,24,0	1/1:0,1:2:27,3,0	1/1:0,10:10:255,30,0
-chr21	35022896	chr21:35022896:M	AATAATAATAATAATAATAATAATAA	<12.7>,<13.7>,<14.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/3:0,7,1,4:12:255,114,89,193,59,160,197,0,116,180	2/3:0,0,3,3:6:169,136,126,54,54,37,54,46,0,37	1/2:0,13,5,0:19:255,94,38,251,0,200,255,80,250,255
-chr21	35033123	chr21:35033123:M	TCATTCATTCATTCATTCA	<5.8>	.	.	Motif=TCAT	GT:AD:DP:PL	0/1:24,15:39:174,0,255	1/1:1,26:27:255,61,0	0/1:26,24:50:255,0,255
-chr21	35037925	chr21:35037925:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:1,19:22:255,47,0	1/1:2,25:28:255,46,0
-chr21	35038573	chr21:35038573:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<12>,<13>,<18>	.	.	Motif=CT	GT:AD:DP:PL	2/3:2,2,3,3:11:136,44,81,25,56,61,70,19,0,109	1/2:0,12,2,0:17:255,54,4,127,0,77,255,54,127,255	1/3:0,6,0,8:20:255,220,206,255,220,255,191,0,70,161
-chr21	35038614	chr21:35038614:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<21>,<24>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,3,8,5:20:255,184,155,131,97,106,230,38,0,227	1/2:0,5,12,0:17:255,130,80,58,0,7,255,130,58,255	1/2:1,7,8,2:19:255,67,45,55,0,33,255,40,30,255
-chr21	35038647	chr21:35038647:M	GAGATAGAGAGAGAGAGAGAGAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/0:17,4:22:0,8,185	0/0:27,0:27:0,76,255	0/1:14,14:30:112,0,112
-chr21	35040772	chr21:35040772:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:28,6,0	.	1/1:0,3:4:59,11,0
-chr21	35047515	chr21:35047515:M	ACACACACACACACACACACACACACACACACACACACACACACACAC	<18>,<19>,<20>,<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	3/4:0,2,4,8,8,2:25:255,255,255,203,201,167,99,64,47,48,132,49,8,0,76,255,167,82,39,104,242	1/4:0,6,0,2,2,1:12:255,78,55,122,48,93,144,8,78,117,175,0,68,114,156,210,26,83,122,163,196	2/5:0,1,4,3,0,5:14:255,154,158,101,105,99,115,81,66,91,152,75,45,75,120,150,45,0,25,97,126
-chr21	35047562	chr21:35047562:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<16.5>,<20.5>,<25.5>	.	.	Motif=CT	GT:AD:DP:PL	0/2:6,0,4,0:12:28,57,176,0,78,93,64,201,126,255	2/3:2,0,5,4:12:128,151,244,70,99,81,46,149,0,167	0/1:2,6,0,0:11:84,0,5,115,32,236,116,38,248,255
-chr21	35049396	chr21:35049396:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,97,255	0/1:17,14:33:155,0,227	0/0:38,1:40:0,99,255
-chr21	35049986	chr21:35049986:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,10,0,6:17:255,159,129,255,106,255,255,0,255,255	1/1:0,24,0,0:24:255,72,0,255,72,255,255,72,255,255	2/3:3,0,5,5:13:140,165,255,34,87,50,21,115,0,86
-chr21	35060265	chr21:35060265:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,22:41:255,0,243	0/1:14,19:34:241,0,162	0/1:20,21:41:255,0,252
-chr21	35064790	chr21:35064790:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,19:43:233,0,255	0/1:16,22:40:255,0,169	0/1:18,23:41:255,0,212
-chr21	35072210	chr21:35072210:M	CTCTCTCTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:11,16:27:203,0,115	0/0:27,1:28:0,64,255
-chr21	35076743	chr21:35076743:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,15,0:22:255,0,96,255,140,255	0/2:6,0,11:20:255,255,255,0,168,129	0/1:7,16,0:26:255,0,131,255,184,255
-chr21	35079563	chr21:35079563:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:4:0,0,22	0/1:2,4:9:39,0,7	0/1:3,2:6:15,0,17
-chr21	35079739	chr21:35079739:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:83,0,110	0/1:9,8:17:90,0,108	0/1:19,12:34:127,0,255
-chr21	35083042	chr21:35083042:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:16,0,38	1/1:0,3:6:52,10,0	0/1:3,3:7:31,0,43
-chr21	35084547	chr21:35084547:M	TATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,11:40:76,0,249	1/1:0,13:16:212,45,0	0/1:16,17:37:157,0,143
-chr21	35086386	chr21:35086386:M	CACACATACACACACACACACACACACACACACACACACA	<18>,<23>	.	.	Motif=CA	GT:AD:DP:PL	0/2:14,0,6:22:106,148,255,0,255,255	1/2:0,9,7:17:255,180,150,241,0,225	0/2:10,0,8:19:188,218,255,0,255,238
-chr21	35093006	chr21:35093006:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:12,17:31:255,0,255	1/1:0,13:18:255,39,0	0/1:13,19:34:255,0,255
-chr21	35099863	chr21:35099863:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,31:52:255,0,246	0/0:36,1:39:0,93,255	0/1:21,25:46:255,0,253
-chr21	35102904	chr21:35102904:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,4:6:67,81,129,0,16,1	1/2:0,8,0:13:140,25,3,138,0,216	0/1:4,1,0:5:3,0,56,18,59,86
-chr21	35105835	chr21:35105835:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,2:12:255,38,25,222,0,210	1/1:0,6,0:8:205,24,0,182,18,173	0/2:5,0,7:13:96,121,255,0,84,49
-chr21	35106755	chr21:35106755:M	CCAGCCCAGCCCAGCCCAGCCCAGCCCAGCACAGCACAGCACAGCCCTGCCCAG	<11.8>	.	.	Motif=CCAGC	GT:AD:DP:PL	0/1:9,7:16:86,0,124	0/1:12,10:22:115,0,151	0/0:19,0:19:0,56,255
-chr21	35114655	chr21:35114655:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:33:0,90,255	0/1:17,10:34:42,0,122	0/0:30,1:31:0,73,255
-chr21	35116447	chr21:35116447:M	GTGTGTGTGTGTGT	<6>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,33:52:255,0,208	0/0:8,0:8:0,24,143	1/1:0,51:51:255,150,0
-chr21	35116460	chr21:35116460:M	TATATATATATAT	<5.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:51,0:51:0,145,255	0/1:8,13:22:117,0,57	0/0:54,2:56:0,131,255
-chr21	35123994	chr21:35123994:M	AAAAAAAAAAAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:34:255,0,157	0/0:31,1:36:0,86,255	1/1:3,31:39:255,34,0
-chr21	35126441	chr21:35126441:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,20:45:253,0,255	0/1:17,17:34:209,0,209	1/1:0,39:39:255,115,0
-chr21	35127742	chr21:35127742:M	ATATATATATATATAT	<9>,<10>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,23,0:39:255,0,195,255,255,255	0/0:38,0,0:38:0,112,255,114,255,255	1/2:0,19,11:30:255,208,121,255,0,255
-chr21	35132879	chr21:35132879:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,2:7:37,0,65	0/0:1,0:1:0,3,25	1/1:0,8:12:234,29,0
-chr21	35134159	chr21:35134159:M	GTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<28>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:19:0,57,255	0/1:5,2:8:32,0,124	0/1:2,3:5:65,0,39
-chr21	35137864	chr21:35137864:M	TTTATTTATTTATTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:11,12:23:255,0,228	0/0:37,0:37:0,111,255
-chr21	35138383	chr21:35138383:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,6,0:19:255,93,54,235,0,182,255,109,236,255	2/3:0,0,19,10:30:255,255,255,255,255,224,255,255,0,255	1/1:0,39,0,0:41:255,123,0,255,120,255,255,123,255,255
-chr21	35139452	chr21:35139452:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:21:0,54,255	0/1:18,25:48:255,0,255	0/0:38,0:43:0,122,255
-chr21	35140180	chr21:35140180:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,3:8:28,52,212,0,86,63	0/1:2,10,1:14:247,0,32,239,16,255	0/2:5,0,2:8:11,34,191,0,92,72
-chr21	35141273	chr21:35141273:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,2:21:0,24,255	0/1:9,9:19:110,0,102	0/0:15,1:17:0,32,255
-chr21	35153190	chr21:35153190:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:7:14,0,66	0/0:9,1:12:0,18,151	0/1:13,5:18:33,0,170
-chr21	35154687	chr21:35154687:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:17,7:24:118,0,255	0/1:13,12:28:255,0,255
-chr21	35156060	chr21:35156060:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,70,255	0/1:5,4:9:25,0,38	0/0:15,0:15:0,42,190
-chr21	35158843	chr21:35158843:M	CAAAAAACAAACAAACAAACAAACAAACAAA	<5.8>	.	.	Motif=CAAA	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:23,18:42:255,0,255	0/0:27,0:30:0,81,255
-chr21	35166279	chr21:35166279:M	GAAGGAGGGAGGGAGGGAAGGAAGGGGGAAGGGAAGAAAGAAAGAAGGAACGAAGGAAGGAAGGAA	<8.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:11,4:15:54,0,238	0/0:18,0:19:0,44,255	0/1:12,3:19:58,0,255
-chr21	35188926	chr21:35188926:M	AAAAAAAGAAAAAAAAAGAGAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:25,0:25:0,74,255	0/1:15,11:26:130,0,204
-chr21	35188980	chr21:35188980:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,2:43:0,89,255	0/0:30,0:30:0,88,255	0/1:19,13:32:149,0,255
-chr21	35189009	chr21:35189009:M	ACACACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,16:42:91,0,169	0/1:10,15:30:107,0,73	0/1:13,14:36:80,0,112
-chr21	35199034	chr21:35199034:M	ACACACACACACACACACACACACACACACACACA	<13.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:20,0,0:20:0,60,255,60,255,255	0/2:16,0,13:29:255,255,255,0,255,255	0/1:11,10,0:22:245,0,255,255,255,255
-chr21	35205674	chr21:35205674:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<18.5>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/2:6,0,6:15:128,157,255,0,184,164	0/0:10,0,0:10:0,30,255,30,255,255	1/2:0,8,4:12:255,99,77,217,0,205
-chr21	35211072	chr21:35211072:M	ACAAACAAACAAACAAACAAACAAACAAACAAAAAAC	<10.2>	.	.	Motif=ACAA	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/0:28,0:29:0,85,255	0/1:22,15:37:173,0,255
-chr21	35216611	chr21:35216611:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:43,1:45:0,114,255	0/1:22,18:40:210,0,255
-chr21	35224602	chr21:35224602:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:13,1:14:0,24,203	0/1:11,14:25:171,0,119
-chr21	35230373	chr21:35230373:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/0:15,0:18:0,45,255	0/1:12,8:24:142,0,255
-chr21	35232459	chr21:35232459:M	TGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:14,9:23:90,0,178	0/1:17,14:31:162,0,217
-chr21	35236635	chr21:35236635:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,6:18:114,0,141	0/1:15,2:21:3,0,255	0/1:4,7:16:167,0,54
-chr21	35240430	chr21:35240430:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,5,7:21:67,27,177,0,27,135	0/2:16,0,10:26:93,165,255,0,227,197	0/1:14,12,0:27:139,0,165,211,204,255
-chr21	35247362	chr21:35247362:M	TAATAATAATAATAATAATAATAATAATAATAATAA	<11>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/0:11,0:11:0,32,197	0/1:13,12:25:149,0,167
-chr21	35254535	chr21:35254535:M	GTGTGTGTGTGTGTGTGCGTGTGTGTGCTTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/0:22,0:22:0,65,255	0/1:12,13:26:165,0,153
-chr21	35264890	chr21:35264890:M	TTTTTGTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:15:0,41,251	0/0:12,1:13:0,21,187	0/1:9,9:19:101,0,110
-chr21	35265062	chr21:35265062:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:29:0,82,255	0/0:15,0:18:0,45,255	0/1:14,13:28:255,0,255
-chr21	35266369	chr21:35266369:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:17:255,32,0	1/1:1,22:23:255,50,0	0/1:9,8:17:93,0,111
-chr21	35271394	chr21:35271394:M	AAAAAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,34,0:55:255,0,228,255,255,255	0/1:20,22,0:44:255,0,222,255,255,255	0/2:19,0,12:34:255,255,255,0,255,255
-chr21	35279809	chr21:35279809:M	AACAACAACAACAACAACAACAACAACAACAACAA	<12.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:21,0:21:0,62,255	0/1:21,11:32:112,0,255
-chr21	35282442	chr21:35282442:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,30,0:33:255,96,0,255,96,255	1/1:0,25,0:25:255,75,0,255,75,255	1/2:0,14,6:21:255,166,126,255,0,255
-chr21	35287880	chr21:35287880:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:1,24:26:255,59,0	1/1:1,26:29:255,65,0
-chr21	35297316	chr21:35297316:M	CACACACACACACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,12:12:255,36,0	0/1:1,4:7:97,0,26	1/1:0,16:17:255,51,0
-chr21	35301722	chr21:35301722:M	AAAAAAAAAAAAAAAAAAGAAAA	<22>,<31>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,8,2:16:122,29,22,96,0,229	0/1:8,3,0:15:24,0,66,49,93,255	1/2:0,8,5:13:200,120,97,102,0,175
-chr21	35305131	chr21:35305131:M	TGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG	<14>,<15>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,20,23,0:43:255,255,255,255,0,255,255,255,255,255	1/3:1,17,0,14:32:255,234,255,255,255,255,255,0,255,255	2/2:0,1,32,0:33:255,255,255,97,79,0,255,255,99,255
-chr21	35307408	chr21:35307408:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:191,33,0	1/1:0,4:4:66,12,0	1/1:0,15:15:254,44,0
-chr21	35314220	chr21:35314220:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,7:9:96,0,9	0/1:5,3:8:27,0,61	0/1:5,8:14:106,0,46
-chr21	35348646	chr21:35348646:M	ATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCT	<16>	.	.	Motif=ATTCT	GT:AD:DP:PL	.	1/1:0,4:4:98,12,0	.
-chr21	35360149	chr21:35360149:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCTCTCTTCTCT	<29>,<32>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,11,7:18:255,184,151,255,0,255	2/2:0,0,14:15:255,255,255,45,45,0	1/1:0,23,0:23:255,69,0,255,69,255
-chr21	35362489	chr21:35362489:M	TGTTTTGTTTTTGTTTTTTTTTTTTG	<5.4>	.	.	Motif=TGTTT	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:0,27:27:255,80,0	1/1:4,28:33:255,22,0
-chr21	35371185	chr21:35371185:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,17:34:255,255,231,222,0,194	0/2:27,0,19:47:255,255,255,0,255,255	1/1:2,31,2:35:255,66,0,255,66,255
-chr21	35376223	chr21:35376223:M	TTTTTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23,0:25:255,74,0,255,74,255	0/1:6,12,0:22:255,0,113,255,110,255	1/2:1,13,8:23:255,120,180,255,0,255
-chr21	35382541	chr21:35382541:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,13:32:144,0,254	0/1:15,8:25:66,0,206	0/0:28,3:31:0,38,255
-chr21	35385951	chr21:35385951:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:39:220,0,248	0/1:23,14:38:140,0,255	0/0:37,0:37:0,109,255
-chr21	35393207	chr21:35393207:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,6:21:24,0,110	1/1:1,11:15:110,10,0	0/0:14,0:17:0,40,184
-chr21	35395417	chr21:35395417:M	TATATATACATATATATATGTATATATATATATATATATATGTATATATATATATAT	<31.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,6:10:116,47,38,70,0,65	.	.
-chr21	35395473	chr21:35395473:M	TTTTTTTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,6:10:234,137,120,67,0,43	0/2:0,0,2:3:51,46,55,0,14,8	1/2:0,2,1:3:79,22,15,46,0,39
-chr21	35395628	chr21:35395628:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,6:19:16,0,255	0/0:10,0:10:0,30,255	0/0:17,0:17:0,51,255
-chr21	35401192	chr21:35401192:M	TTCTTTTTCATTTTCTTTTTTTTTTTTTT	<4.7>,<5>	.	.	Motif=TTCTTT	GT:AD:DP:PL	1/2:0,4,9:13:227,175,201,79,0,71	0/2:13,1,7:23:82,109,255,0,202,213	0/1:18,15,0:34:216,0,255,255,255,255
-chr21	35403024	chr21:35403024:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<20.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,2,9,0:11:255,154,123,35,0,2,255,155,35,255	1/1:0,11,0,0:13:255,33,0,212,32,181,255,33,212,255	2/3:0,0,6,6:13:255,255,255,182,181,164,165,101,0,150
-chr21	35409715	chr21:35409715:M	CACACACACACACACACACA	<11>,<12>	.	.	Motif=CA	GT:AD:DP:PL	1/2:1,13,18:32:255,255,252,194,0,166	1/1:0,30,0:30:255,88,0,255,88,255	1/2:1,22,21:44:255,255,255,255,0,255
-chr21	35413203	chr21:35413203:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,9,0:12:169,120,140,18,0,1,197,162,34,255	2/3:0,0,6,3:9:129,137,172,51,83,63,102,102,0,152	0/1:8,6,2,0:16:137,0,197,75,110,171,169,146,194,255
-chr21	35414094	chr21:35414094:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,9:13:140,3,0	0/1:3,8:11:100,0,17	0/1:8,8:18:83,0,101
-chr21	35426247	chr21:35426247:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,26:28:255,46,0	1/1:3,28:31:255,38,0	1/1:1,32:34:255,72,0
-chr21	35429428	chr21:35429428:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,5:9:136,58,75,35,0,27	1/2:2,2,4:9:90,24,66,16,0,24	1/1:0,4,1:7:149,18,0,92,3,77
-chr21	35430398	chr21:35430398:M	TTCCTTCCTTTCTCCTTCCTTCCTTCCTTCC	<6.8>	.	.	Motif=TTCC	GT:AD:DP:PL	0/0:45,0:45:0,133,255	0/1:13,5:18:38,0,181	0/0:37,0:37:0,109,255
-chr21	35435661	chr21:35435661:M	TTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,12,0:12:255,228,195,36,35,0,228,195,35,195	0/1:12,5,2,0:20:44,0,142,34,165,255,79,192,255,255	2/3:1,0,3,6:10:226,186,183,71,86,69,23,30,0,23
-chr21	35437242	chr21:35437242:M	TTTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,3:12:255,50,16,152,0,120	0/1:7,5,0:14:108,0,164,88,177,249	0/1:4,4,0:10:79,0,98,66,108,163
-chr21	35438215	chr21:35438215:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,115,0	0/1:19,22:42:255,0,225	0/1:23,17:41:193,0,255
-chr21	35440714	chr21:35440714:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,153	0/0:6,0:6:0,18,102	0/1:6,4:10:41,0,76
-chr21	35443412	chr21:35443412:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:45:255,135,0	0/1:2,16:26:255,0,43	0/1:2,18:26:255,0,19
-chr21	35446085	chr21:35446085:M	ATATATATATATATATATATATATATATAT	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17,0:22:255,58,0,255,60,255	0/1:3,3,0:6:24,0,24,35,10,54	1/2:0,6,11:20:83,35,169,75,0,86
-chr21	35446114	chr21:35446114:M	TTTTTTTTTTTTTTTT	<11>,<15>,<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:1,0,13,9,0:24:242,255,255,116,229,175,176,255,0,255,255,255,231,255,255	1/3:0,4,2,3,0:9:118,20,74,103,24,125,89,0,62,99,132,85,136,112,197	2/4:0,0,6,0,4:12:179,183,255,108,96,89,196,250,108,254,88,157,0,155,158
-chr21	35463310	chr21:35463310:M	ACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:21,13:36:211,0,255	0/1:25,18:44:255,0,255	0/1:4,25:33:255,0,10
-chr21	35467967	chr21:35467967:M	CTCCTTCTCCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTC	<12.3>	.	.	Motif=CTC	GT:AD:DP:PL	0/1:7,10:17:137,0,81	0/1:11,13:24:159,0,124	0/0:32,0:32:0,94,255
-chr21	35480819	chr21:35480819:M	ATATATTATATATATATATA	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,15:32:195,0,231	0/1:20,11:32:106,0,255	1/1:2,29:31:255,54,0
-chr21	35505020	chr21:35505020:M	TTTTTTTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,5:22:27,0,217	0/1:10,5:15:42,0,128	0/0:27,1:32:0,74,255
-chr21	35507159	chr21:35507159:M	CACACACACACACACACACACACACACACACACACACACACACACACAC	<18.5>,<19.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,1,23:24:255,255,255,72,53,0	1/2:0,13,5:21:255,95,36,237,0,183	1/2:0,13,13:26:255,226,151,225,0,151
-chr21	35512066	chr21:35512066:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:26:255,76,0	1/1:1,25:26:255,59,0	1/1:0,19:20:255,58,0
-chr21	35512864	chr21:35512864:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:192,21,0	1/1:0,4:6:119,13,0	1/1:0,2:3:60,6,0
-chr21	35517123	chr21:35517123:M	AAAAAAAAAAGAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:21,18:40:205,0,255	0/0:44,0:44:0,130,255
-chr21	35519353	chr21:35519353:M	CACACACACACACACACACACACACACACACACA	<20>,<22>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,15:19:255,255,255,56,48,0	2/2:0,0,20:24:255,255,255,71,63,0	1/2:0,10,12:24:255,255,255,255,0,223
-chr21	35522517	chr21:35522517:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,19:51:255,0,255	0/1:15,16:34:255,0,255	0/0:39,0:43:0,120,255
-chr21	35526670	chr21:35526670:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,6:9:238,102,76,51,0,25	0/1:4,6,0:10:138,0,82,97,102,186	0/2:8,0,7:15:160,116,255,0,206,192
-chr21	35526746	chr21:35526746:M	ATATATATATATAATATATAATATATTATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,10:10:119,27,0	.	1/1:0,1:1:12,3,0
-chr21	35526825	chr21:35526825:M	ACACACACACACACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,2:17:4,0,255	0/1:5,3:9:52,0,115	0/0:14,0:14:0,42,255
-chr21	35526925	chr21:35526925:M	ATATATAGATATAGATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,10:27:31,0,255	0/0:8,0:8:0,24,207	0/0:17,1:19:0,45,255
-chr21	35526949	chr21:35526949:M	ACACACACACACACACACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:14,0:20:0,17,255	1/1:0,7:13:171,25,0	0/0:20,0:20:0,60,255
-chr21	35535564	chr21:35535564:M	AAAAAGAAAGAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:34:0,92,255	0/0:21,1:22:0,47,255	0/1:21,8:30:57,0,255
-chr21	35536843	chr21:35536843:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,119	0/1:7,3:11:17,0,94	0/0:5,1:8:0,4,80
-chr21	35553026	chr21:35553026:M	AAAAAGAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,20:49:255,0,255	0/1:13,17:32:255,0,255	1/1:0,58:61:255,182,0
-chr21	35558605	chr21:35558605:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,9,53	0/0:5,0:7:0,18,95	1/1:1,6:7:85,3,0
-chr21	35578256	chr21:35578256:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,3:43:0,73,255	0/0:33,3:38:0,60,255	0/1:19,27:47:255,0,193
-chr21	35589667	chr21:35589667:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,11:13:161,2,0	1/1:1,15:19:255,37,0	0/1:4,9:14:117,0,39
-chr21	35599704	chr21:35599704:M	GAGGAGGAGGAGGAGGAG	<7>	.	.	Motif=GAG	GT:AD:DP:PL	0/1:18,21:40:255,0,239	0/1:19,21:40:255,0,228	0/0:38,0:38:0,112,255
-chr21	35605494	chr21:35605494:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,22:35:255,0,119	0/1:22,17:41:187,0,255	1/1:0,41:41:255,121,0
-chr21	35610052	chr21:35610052:M	TATATATATATATATATATATATA	<11>,<13>	.	.	Motif=TA	GT:AD:DP:PL	0/2:13,1,9:23:99,146,255,0,184,181	1/2:0,15,3:20:255,59,36,255,0,255	0/1:8,17,0:25:233,0,71,255,122,255
-chr21	35622140	chr21:35622140:M	ATATATATATATATATATATATA	<9.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,8,6:19:209,93,146,134,0,204	1/1:0,7,0:7:140,21,0,156,21,196	2/2:1,0,5:8:97,116,174,1,21,0
-chr21	35622162	chr21:35622162:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<17>,<25>	.	.	Motif=AG	GT:AD:DP:PL	0/2:1,0,5:11:82,100,171,0,23,2	1/1:0,3,0:5:88,9,0,88,9,88	0/2:2,0,5:7:79,97,186,0,39,19
-chr21	35622263	chr21:35622263:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,14:24:189,0,104	0/1:9,8:19:95,0,112	0/0:20,0:21:0,61,255
-chr21	35629473	chr21:35629473:M	AAAAAAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,16,11:31:255,213,129,255,0,218	1/2:0,15,9:25:255,152,80,255,0,194	2/2:0,3,25:29:255,255,255,86,32,0
-chr21	35630479	chr21:35630479:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGCGTGTGTGTGT	<25>,<26>,<29>	.	.	Motif=GT	GT:AD:DP:PL	1/3:2,7,0,12:22:255,166,255,255,255,255,158,0,125,151	1/3:1,8,0,2:12:230,16,36,152,61,174,207,0,136,214	1/2:0,8,10,0:21:255,163,104,161,0,106,255,164,161,255
-chr21	35630813	chr21:35630813:M	ACACACACATACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,32:35:255,96,0	1/1:1,31:37:255,72,0	1/1:0,33:35:255,99,0
-chr21	35642006	chr21:35642006:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:21:191,0,242	0/1:15,12:30:237,0,255	0/1:14,13:30:255,0,255
-chr21	35647614	chr21:35647614:M	TTTTTCTTTTTTTTTCCTGTTTTCTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:15:255,42,0	1/1:0,11:13:255,38,0	1/1:0,14:16:255,47,0
-chr21	35650174	chr21:35650174:M	AAATAAATAAATAAATAAATAAATA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,26:26:255,77,0	1/1:0,43:43:255,127,0
-chr21	35654188	chr21:35654188:M	CACACACACACACACACACACACACACACACACACACACACA	<19>,<20>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,17,0:19:255,56,0,255,55,255	1/1:0,16,0:18:255,53,0,255,52,255	1/2:1,9,7:18:255,84,80,143,0,113
-chr21	35655703	chr21:35655703:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:18:255,52,0	1/1:0,21:21:255,62,0	1/1:2,27:30:255,52,0
-chr21	35660079	chr21:35660079:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:10:79,0,104	0/1:2,2:4:41,0,41	0/1:2,4:8:98,0,32
-chr21	35671189	chr21:35671189:M	TTTTTTTTTTTTTTTTTTTTTTT	<12>,<27>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,8:15:223,235,255,0,90,57	0/2:1,0,5:10:153,160,198,0,38,14	1/1:2,17,0:19:255,3,0,255,51,255
-chr21	35674619	chr21:35674619:M	TTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTTGTTGTT	<11.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:18,12:32:173,0,255	0/1:16,20:37:255,0,236	0/0:32,3:36:0,39,255
-chr21	35675592	chr21:35675592:M	CCCCCCCCCCCCCC	<13>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,3:4:63,12,0	0/0:1,0:1:0,3,16	0/0:1,0:1:0,3,17
-chr21	35680545	chr21:35680545:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/0:45,0:46:0,135,255	0/1:19,22:43:255,0,229
-chr21	35699740	chr21:35699740:M	ACACACACACACACACACACACACACACACACACACAC	<15>,<17>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,15,11:26:255,255,236,255,0,255	1/2:0,16,10:29:255,254,210,255,0,255	2/2:0,0,24:26:255,255,255,78,72,0
-chr21	35704557	chr21:35704557:M	AGAGAGAGAGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:20,11:33:179,0,255	0/1:12,12:25:222,0,233	0/0:37,0:37:0,111,255
-chr21	35704577	chr21:35704577:M	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<7.5>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:14,8:22:48,0,132	1/1:1,17:18:215,37,0	0/0:27,0:27:0,76,255
-chr21	35704663	chr21:35704663:M	AGAGAAAGAAGAAAGAAAAAGAAAGGAATGAAAGAAAGAGAAAGGGAACGAAAGAAAGGAAAAAGAGATAGAAAAGAGAGACAGAGACAGAGA	<7.3>	.	.	Motif=AGAGAA	GT:AD:DP:PL	1/1:0,4:4:135,12,0	1/1:0,2:2:65,6,0	1/1:0,1:1:35,3,0
-chr21	35704814	chr21:35704814:M	GAAGGAAGGAAGAAAGGAAGGAAGGAAGGAAGAAAGG	<10.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:14,3:17:8,0,215	0/1:11,7:18:74,0,143	0/0:26,0:26:0,77,255
-chr21	35704888	chr21:35704888:M	GAAAGAAAGAGAAAAGAGAAGGAAAGAGAGAGAGACAGACAGAAAAGAAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAAGGAAGAAAG	<20.2>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:1,1:2:12,0,13	0/0:2,0:2:0,6,37	1/1:0,4:4:72,12,0
-chr21	35708251	chr21:35708251:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,14,0:30:255,0,255,237,255,255	0/1:15,15,1:37:255,0,255,255,255,255	0/2:9,0,15:25:255,255,255,0,235,184
-chr21	35711660	chr21:35711660:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,20:25:255,0,18	0/1:7,14:21:181,0,59	0/1:9,6:19:79,0,115
-chr21	35714726	chr21:35714726:M	TGAGGTGAGGTGAGGTGAGGGAGG	<6.8>	.	.	Motif=TGAGG	GT:AD:DP:PL	0/1:17,13:30:255,0,255	0/1:22,12:35:228,0,255	0/1:9,16:25:255,0,175
-chr21	35719552	chr21:35719552:M	TTTTTTGTTTTTGTTTTTGTTTTTGTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:37:255,0,255	0/1:10,20:30:255,0,185	0/0:38,0:38:0,114,255
-chr21	35730163	chr21:35730163:M	TTTTTTTTTGTTTTGGTTTGGTTTGGTTTTTGGTTTTTGATTTTTGTTTTTTTTTTTTGTTTTTTTT	<15>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:5,4:10:87,0,95	0/1:3,6:9:128,0,47	0/1:4,10:15:213,0,67
-chr21	35739972	chr21:35739972:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:61,0,87	0/1:5,13:18:167,0,32	0/1:9,5:16:41,0,128
-chr21	35744789	chr21:35744789:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,8:17:174,0,146	1/1:0,8:9:229,27,0	0/0:14,0:16:0,47,255
-chr21	35768210	chr21:35768210:M	GAGAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGA	<25>	.	.	Motif=GA	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:8,8:16:166,0,169	0/0:22,0:22:0,66,255
-chr21	35782884	chr21:35782884:M	AAATAAATAAATAAAATAAACAATAAATAACAAATAAATAAATAAAATAAACAAATAAA	<16.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,15:15:255,45,0	1/1:0,5:5:122,15,0	1/1:0,9:9:223,27,0
-chr21	35788663	chr21:35788663:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,99,0	1/1:0,32:32:255,96,0	1/1:0,29:29:255,87,0
-chr21	35793298	chr21:35793298:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:39,0,5	0/1:1,4:5:50,0,2	0/1:1,2:3:24,0,8
-chr21	35816065	chr21:35816065:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30:31:255,91,0	1/1:1,34:36:255,88,0	1/1:0,26:33:255,95,0
-chr21	35832723	chr21:35832723:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,5:33:0,25,255	0/1:25,10:35:35,0,234	0/0:30,7:37:0,10,255
-chr21	35840723	chr21:35840723:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:25:255,20,0	1/1:1,20:21:255,45,0	0/1:5,15:21:206,0,26
-chr21	35840875	chr21:35840875:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7,0:8:107,6,0,110,23,135	0/1:2,6,0:8:78,0,11,84,34,135	1/2:2,6,5:14:159,43,49,46,0,89
-chr21	35841486	chr21:35841486:M	TTTTTTTTGTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,14,6:22:255,97,54,193,0,196	1/1:1,23,0:24:255,53,0,255,70,255	1/2:2,12,14:29:255,216,173,142,0,149
-chr21	35842576	chr21:35842576:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,16:19:255,56,0	1/1:0,12:12:255,36,0	1/1:0,21:25:255,74,0
-chr21	35843636	chr21:35843636:M	AGATCAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	<12.2>,<13.2>,<14.2>	.	.	Motif=AGAT	GT:AD:DP:PL	0/1:10,15,0,0:25:220,0,121,250,192,255,255,193,255,255	1/3:0,9,0,14:23:255,255,255,255,253,255,164,0,163,232	0/2:12,0,14,0:26:255,255,255,0,223,255,255,255,255,255
-chr21	35850352	chr21:35850352:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,40,0	1/1:2,33:36:255,60,0	1/1:4,35:40:255,35,0
-chr21	35851419	chr21:35851419:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,14:19:255,250,199,91,0,36	2/2:0,1,16:19:255,255,255,51,27,0	2/2:0,1,19:20:255,255,255,60,41,0
-chr21	35874526	chr21:35874526:M	TTTTGTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:15:221,27,0	0/1:2,6:10:88,0,4	1/1:2,16:22:237,7,0
-chr21	35880490	chr21:35880490:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:93,17,0	1/1:0,6:7:89,8,0	0/1:2,8:10:111,0,6
-chr21	35894902	chr21:35894902:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:21:151,0,98	0/0:24,4:29:0,17,255	0/1:13,8:24:99,0,156
-chr21	35926944	chr21:35926944:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:16:173,0,18	1/1:4,23:29:255,12,0	1/1:4,23:29:255,13,0
-chr21	35942571	chr21:35942571:M	CACACACACACACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:20,13:33:255,0,255	0/1:19,15:34:255,0,255
-chr21	35946176	chr21:35946176:M	AGAGAGAGAGAGAGAAAGAAAGAGGGAGAGAGAGAGGGAGAGAGAAGGGGGGGACAGAGAGAGAGAGA	<32>	.	.	Motif=AG	GT:AD:DP:PL	0/0:13,0:14:0,42,255	0/1:3,7:10:166,0,48	0/1:7,7:15:174,0,145
-chr21	35957269	chr21:35957269:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:7,15:25:192,0,64	0/1:11,4:19:58,0,141
-chr21	35960221	chr21:35960221:M	TCTCTCTCTCTCTCTCTCTCTCTCT	<11.5>,<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:18,9,0:27:44,0,163,119,190,255	0/2:4,3,7:14:52,51,143,0,4,47	0/2:12,0,9:21:59,117,255,0,126,99
-chr21	35960245	chr21:35960245:M	TATATATATATATATACATATACATATATATATAT	<19.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,16:20:255,28,0	1/1:0,4:4:88,12,0	1/1:0,9:10:200,27,0
-chr21	35960440	chr21:35960440:M	TGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGG	<9.8>,<12.8>	.	.	Motif=TGGA	GT:AD:DP:PL	2/2:0,0,26:26:255,255,255,77,78,0	1/2:0,7,5:12:255,89,109,185,0,170	1/2:0,16,10:26:255,185,219,255,0,255
-chr21	35965382	chr21:35965382:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,45,255	0/1:9,16:26:198,0,73	0/1:11,11:24:126,0,125
-chr21	35966749	chr21:35966749:M	TTTTTTGTTTTGTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:23:0,63,255	0/1:11,5:16:81,0,248	0/1:7,8:17:177,0,141
-chr21	35967625	chr21:35967625:M	TTTTTTGTTGTTTGTTTTTGTTTGTTTTTTTTTTGTATGTTTGTTTTTTTTTT	<52>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,46,255	0/1:7,13:20:174,0,65	0/1:14,10:24:115,0,182
-chr21	35968833	chr21:35968833:M	GAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAG	<17.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:14,14:29:158,0,158	0/1:15,10:25:104,0,192
-chr21	35970172	chr21:35970172:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:24:0,51,255	0/1:13,5:18:34,0,174	0/1:9,10:21:122,0,114
-chr21	35975950	chr21:35975950:M	GAATGAGATAGAATGAAAATAATGAATGAATGAATGAATGAATGA	<10.2>	.	.	Motif=GAAT	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/1:24,12:36:114,0,255	0/1:10,9:19:115,0,131
-chr21	35982990	chr21:35982990:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6,0:17:54,0,132,103,178,255	0/1:9,4,0:14:36,0,107,75,147,255	0/2:4,0,4:8:88,99,155,0,67,95
-chr21	35985925	chr21:35985925:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:66,0,5	0/1:1,1:2:14,0,14	1/1:0,0:3:16,3,0
-chr21	35985941	chr21:35985941:M	ATATATATATATATATATATATATATATGTATAT	<15>,<17.5>,<19>	.	.	Motif=AT	GT:AD:DP:PL	2/3:0,0,4,7:12:174,196,255,129,137,106,20,72,0,38	1/3:0,3,0,1:4:86,23,17,85,18,87,70,0,74,74	1/3:0,6,0,1:8:154,23,4,155,18,159,140,0,147,148
-chr21	35988750	chr21:35988750:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,0,0:12:0,32,255,24,255,255	0/1:5,6,0:15:197,0,129,132,155,255	0/2:2,2,6:13:207,88,130,0,30,34
-chr21	35990734	chr21:35990734:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:15:0,25,215	0/1:11,14:27:173,0,112	0/1:8,4:12:35,0,106
-chr21	35991721	chr21:35991721:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:36:0,84,255	0/1:11,13:27:246,0,174	0/1:16,16:34:255,0,255
-chr21	35999299	chr21:35999299:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,16:26:226,0,112	0/1:26,19:47:220,0,255	0/0:41,1:42:0,106,255
-chr21	36002580	chr21:36002580:M	AAAAAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<62>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:7,0:7:0,21,193	0/1:10,4:14:68,0,234
-chr21	36011661	chr21:36011661:M	TTTTTTTTTTTTTTTCTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,16:26:220,0,108	1/1:1,23:26:255,58,0	0/1:12,11:23:131,0,149
-chr21	36012783	chr21:36012783:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:26:198,0,124	0/1:11,16:28:206,0,110	0/0:22,1:24:0,52,255
-chr21	36015896	chr21:36015896:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,0:42:0,122,255	0/1:21,6:27:23,0,255	0/1:19,12:35:127,0,251
-chr21	36018714	chr21:36018714:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,3:12:20,36,187,0,105,123	2/2:0,0,9:9:157,182,255,26,27,0	0/1:8,11,0:21:158,0,82,212,120,255
-chr21	36022333	chr21:36022333:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:49:0,144,255	0/1:15,23:39:255,0,165	0/1:20,17:38:214,0,255
-chr21	36023845	chr21:36023845:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,2:14:0,6,178	0/1:5,2:7:13,0,64	0/1:4,8:13:100,0,41
-chr21	36026541	chr21:36026541:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0,0:24:0,70,255,72,255,255	0/1:8,7,1:17:85,0,94,85,121,255	0/2:16,1,12:32:255,210,255,0,255,255
-chr21	36027264	chr21:36027264:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19:34:255,0,162	0/1:32,25:58:255,0,255	0/0:54,1:57:0,149,255
-chr21	36028188	chr21:36028188:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,19:34:255,0,179	0/0:34,0:34:0,100,255	0/1:21,13:35:133,0,255
-chr21	36029251	chr21:36029251:M	AAAAAAAAAAAAAAGAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,6:32:89,0,255	0/1:2,10:13:229,0,13	0/0:13,0:15:0,42,255
-chr21	36037605	chr21:36037605:M	AAAAAAAAAAAAAAAATAGAAAAGAAAAAGAAAAAATAAAAATAAAAAA	<50>,<51>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1,0:10:0,9,128,24,151,227	0/2:3,2,3:10:55,21,67,0,39,79	0/1:2,7,0:9:97,0,9,103,35,152
-chr21	36041897	chr21:36041897:M	AAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,21,0:45:255,0,255,255,255,255	1/2:0,30,24:55:255,255,255,255,0,255	0/2:26,1,19:50:255,255,255,0,255,255
-chr21	36048718	chr21:36048718:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,2:14:16,0,143	1/1:0,7:9:120,14,0	0/1:9,4:13:33,0,123
-chr21	36052385	chr21:36052385:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:17,0,53	1/1:0,1:2:18,4,0	0/1:7,6:14:62,0,90
-chr21	36058506	chr21:36058506:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:187,0,174	0/1:11,9:25:180,0,255	0/0:21,0:22:0,66,255
-chr21	36062811	chr21:36062811:M	AAAACAAAACAAAACAAAACAAAA	<5.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:22,12:34:132,0,255	0/1:15,17:32:215,0,179	0/0:31,0:31:0,92,255
-chr21	36065532	chr21:36065532:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,8:22:82,0,183	0/1:9,14:24:173,0,95	0/0:22,1:23:0,50,255
-chr21	36070854	chr21:36070854:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>,<28>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,13:21:177,206,255,0,66,62	2/2:2,0,11:16:179,215,255,10,39,0	0/1:4,3,2:9:27,0,67,18,24,98
-chr21	36074330	chr21:36074330:M	TTTATTTATTTATTTATTTATTTGTTTGTTTGTTTGTTTGTTTATT	<10.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:7,3:10:27,0,103	1/1:0,13:13:233,38,0	0/1:20,7:27:50,0,255
-chr21	36076015	chr21:36076015:M	AACAACAACAACAA	<5.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:28,14:42:148,0,255	0/1:28,20:48:224,0,255	0/0:63,0:63:0,186,255
-chr21	36076746	chr21:36076746:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,21:45:255,0,255	0/1:22,17:39:185,0,255	0/0:47,1:48:0,123,255
-chr21	36079609	chr21:36079609:M	TTTTTTTTTGTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:146,0,184	0/1:25,14:40:129,0,255	0/0:37,0:37:0,109,255
-chr21	36080802	chr21:36080802:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,2:13:0,3,158	0/1:2,6:10:84,0,8	0/1:8,8:20:111,0,83
-chr21	36081135	chr21:36081135:M	AAAAAAAAAAAAAGAAAAAGAAAAGAAAAGAAAA	<33>,<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,15,0:28:198,0,161,255,239,255	1/2:0,15,10:26:255,251,209,255,0,255	0/2:11,1,7:19:141,160,255,0,180,255
-chr21	36082608	chr21:36082608:M	TTTTTTTTTTTTTTTTTTTTTT	<18>,<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7,4,1:21:255,0,144,84,111,234,255,90,174,255	2/3:0,0,7,7:15:255,251,255,121,195,167,195,121,0,166	0/3:5,0,0,1:8:7,28,195,18,184,181,0,97,95,77
-chr21	36084184	chr21:36084184:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:12:72,0,73	1/1:2,14:19:205,9,0	0/1:6,5:12:53,0,79
-chr21	36086854	chr21:36086854:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,51	0/1:1,3:4:37,0,5	1/1:0,1:1:17,3,0
-chr21	36089404	chr21:36089404:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:3:0,8,40	0/1:0,1:3:20,0,3	0/1:4,3:8:29,0,59
-chr21	36092423	chr21:36092423:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<12>,<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,3:7:159,44,24,51,0,31	1/2:0,1,3:5:102,42,28,26,0,13	1/2:0,2,5:8:167,71,52,29,0,9
-chr21	36096200	chr21:36096200:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,15:30:192,0,191	0/0:27,1:28:0,65,255	0/1:23,13:36:131,0,255
-chr21	36096365	chr21:36096365:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:17:192,32,0	0/1:8,8:19:70,0,59	0/0:12,1:15:0,23,149
-chr21	36112325	chr21:36112325:M	AAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,5,0:21:86,0,255,94,255,255	0/1:11,6,0:17:111,0,255,98,255,255	1/2:0,6,5:14:255,87,56,102,0,86
-chr21	36113676	chr21:36113676:M	CACACACACACACACACACACAC	<7.5>,<10.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:1,0,5:8:66,78,166,9,21,0	1/2:0,5,2:7:146,23,35,126,0,120	0/0:6,0,0:6:0,18,174,16,89,71
-chr21	36114246	chr21:36114246:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,4:9:45,68,222,0,69,45	0/1:1,1,0:7:43,0,18,26,11,33	1/2:0,7,5:15:255,86,108,195,0,174
-chr21	36115229	chr21:36115229:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,8,0:11:111,0,21,141,45,251	0/2:6,1,6:14:72,92,224,0,69,72	1/2:2,7,8:20:210,106,168,120,0,183
-chr21	36116142	chr21:36116142:M	TTTTTCTTTCTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:22,1:25:0,53,255	0/1:19,14:35:155,0,255
-chr21	36118512	chr21:36118512:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,6,57	0/1:4,3:9:63,0,92	0/0:2,0:4:0,12,84
-chr21	36122200	chr21:36122200:M	AAAAAAGAAAAAAAAAAAAAAAA	<22>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0,0:21:0,61,255,60,255,255	0/1:17,9,0:27:84,0,207,160,255,255	0/2:12,0,8:21:165,207,255,0,206,255
-chr21	36123192	chr21:36123192:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAAAATA	<11>,<12>	.	.	Motif=AAAT	GT:AD:DP:PL	0/2:7,0,12:19:178,199,255,0,133,80	0/1:3,4,0:7:97,0,65,72,53,107	2/2:1,0,9:10:152,155,182,11,29,0
-chr21	36124861	chr21:36124861:M	AAAAAAGAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,23:44:255,0,255	0/0:31,1:32:0,76,255	1/1:0,34:37:255,107,0
-chr21	36127575	chr21:36127575:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:12:0,35,209	0/0:12,0:12:0,35,200	0/1:4,4:8:45,0,45
-chr21	36128711	chr21:36128711:M	TTTTTCTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:23:0,57,255	0/1:9,6:18:49,0,96	0/0:30,0:31:0,90,255
-chr21	36131912	chr21:36131912:M	AAATAAATAAATAAATAAATAATTTAAAAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,9:26:71,0,119	0/1:7,5:18:38,0,68	1/1:0,25:33:255,45,0
-chr21	36133767	chr21:36133767:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,6,1:8:201,119,100,24,5,0,121,77,6,101	0/1:2,9,1,0:13:248,0,25,134,37,161,238,52,189,255	2/3:0,1,11,5:17:255,255,255,87,69,38,201,143,0,155
-chr21	36133848	chr21:36133848:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,69,0	1/1:1,9:10:139,12,0	0/1:12,11:23:129,0,147
-chr21	36136309	chr21:36136309:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12,1:31:144,0,247,172,255,255	0/2:7,2,11:21:255,161,238,0,101,157	1/2:1,14,13:29:255,214,155,198,0,185
-chr21	36137028	chr21:36137028:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,6:10:246,123,99,35,0,6	0/0:0,0,0:1:0,0,0,0,0,0	1/2:0,3,4:7:197,67,47,51,0,30
-chr21	36137467	chr21:36137467:M	AAAGAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAG	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:17,2:19:0,12,255	0/1:7,4:13:72,0,135	0/0:30,1:31:0,68,255
-chr21	36137504	chr21:36137504:M	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<7.5>,<11.5>,<12.5>,<13.5>	.	.	Motif=AAGG	GT:AD:DP:PL	2/4:0,0,19,0,11:30:255,255,255,191,255,248,255,255,190,255,255,255,0,255,255	3/4:1,0,1,6,12:20:255,255,255,255,255,255,150,210,192,154,95,113,67,0,56	1/2:0,27,17,0,0:44:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
-chr21	36138104	chr21:36138104:M	TTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTTGTTTTGTTT	<6.6>,<9.6>	.	.	Motif=TTTAG	GT:AD:DP:PL	0/1:14,10,0:24:210,0,255,253,255,255	0/0:21,0,0:21:0,63,255,62,255,255	1/2:0,13,14:27:255,255,255,255,0,255
-chr21	36138720	chr21:36138720:M	TTTTCTTTTCTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,16:18:255,15,0	0/0:3,0:4:0,9,88	0/1:5,9:16:226,0,104
-chr21	36139377	chr21:36139377:M	TTTTTCTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,4:13:36,41,221,0,81,94	0/2:7,0,7:15:74,114,255,0,117,84	1/2:2,7,6:20:238,71,145,158,0,186
-chr21	36139882	chr21:36139882:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:6:0,7,72	0/1:8,4:13:25,0,99	1/1:0,1:3:38,8,0
-chr21	36141262	chr21:36141262:M	AAAAAAAAAAAAAAA	<17>,<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,1,6,0:21:131,88,255,0,255,255,173,255,255,255	0/2:10,1,7,0:20:174,105,255,0,249,255,206,255,255,255	1/3:1,3,2,3:10:159,63,75,80,55,93,73,0,18,92
-chr21	36143880	chr21:36143880:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:12:122,0,28	0/1:3,6:12:139,0,43	0/1:5,3:8:54,0,105
-chr21	36145961	chr21:36145961:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1,0:11:0,4,229,21,158,150	1/2:1,5,3:10:160,25,34,75,0,66	0/0:9,0,0:10:0,30,255,29,191,166
-chr21	36146908	chr21:36146908:M	TCTCTCTCTCTCTCTCT	<5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:8,3:11:56,0,166	0/0:17,0:19:0,55,255	1/1:0,5:5:148,15,0
-chr21	36148538	chr21:36148538:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:27:0,79,255	0/1:14,12:28:128,0,182	0/0:20,0:23:0,64,255
-chr21	36152312	chr21:36152312:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:17:0,16,255	0/1:2,4:11:109,0,29	0/0:7,0:8:0,21,195
-chr21	36154077	chr21:36154077:M	AAAAAAAAAAAAAAAGAAAGAAAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0,1:17:0,37,255,21,209,181	0/1:11,9,0:20:203,0,255,152,186,255	2/2:0,1,8:11:152,127,124,26,9,0
-chr21	36154429	chr21:36154429:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13,0:27:166,0,166,238,205,255	0/2:12,0,11:24:139,204,255,0,177,141	1/1:4,24,0:28:255,10,0,255,72,255
-chr21	36155067	chr21:36155067:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,19,0:33:255,0,255,255,229,255	0/2:16,1,17:36:209,236,255,0,255,200	1/2:0,24,18:42:255,255,207,255,0,255
-chr21	36155104	chr21:36155104:M	TTTTTTTTTTGTTGTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:33:191,0,173	0/0:43,1:44:0,112,255	1/1:0,33:34:255,99,0
-chr21	36158803	chr21:36158803:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:27,0,204	0/0:9,0:12:0,29,255	1/1:0,11:15:255,36,0
-chr21	36161139	chr21:36161139:M	TGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/0:43,0:43:0,129,255	0/1:27,16:43:255,0,255
-chr21	36163345	chr21:36163345:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,1:15:0,19,255	0/0:17,0:18:0,54,255	1/1:0,3:5:99,14,0
-chr21	36163357	chr21:36163357:M	AAAGAAAGAAAGAAAG	<2.2>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:15,1:18:14,0,255	0/1:11,4:17:102,0,255	1/1:0,3:7:149,18,0
-chr21	36165719	chr21:36165719:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7,1:21:78,0,161,90,196,255	0/2:7,2,3:12:56,22,109,0,90,168	0/1:6,2,1:11:15,0,98,13,106,181
-chr21	36166437	chr21:36166437:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/1:13,12:25:139,0,156	0/0:34,0:35:0,103,255
-chr21	36167915	chr21:36167915:M	TTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,5:7:146,0,40	0/0:3,0:6:0,13,118	1/1:0,2:4:96,12,0
-chr21	36170609	chr21:36170609:M	ATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,0:36:0,89,255	0/0:16,0:16:0,48,255	0/1:21,16:39:255,0,255
-chr21	36170802	chr21:36170802:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,3:28:0,28,255	0/1:6,11:18:137,0,61	0/0:28,5:33:0,9,255
-chr21	36173425	chr21:36173425:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,0,6:19:56,110,255,0,204,186	0/0:22,0,0:24:0,47,255,66,255,255	1/2:1,12,6:20:255,99,130,199,0,255
-chr21	36173868	chr21:36173868:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,21:42:255,0,255	0/0:39,3:46:0,62,255	0/1:18,17:37:218,0,220
-chr21	36175117	chr21:36175117:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:26:146,0,255	0/0:26,1:28:0,47,255	0/1:20,16:38:255,0,255
-chr21	36176088	chr21:36176088:M	GTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTG	<23.5>,<27.5>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,14:19:255,255,255,53,53,0	1/2:0,17,13:32:255,255,255,255,0,255	2/2:0,0,13:19:255,255,255,51,51,0
-chr21	36178438	chr21:36178438:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:28:125,0,226	0/1:12,11:24:127,0,145	0/0:32,3:36:0,51,255
-chr21	36180579	chr21:36180579:M	AAAAAAAGAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:16,20:36:255,0,185	0/1:22,22:44:255,0,255
-chr21	36180886	chr21:36180886:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,17:36:222,0,208	0/0:26,1:28:0,64,255	0/1:16,15:35:184,0,206
-chr21	36183867	chr21:36183867:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,5:17:105,0,186	0/1:11,8:22:154,0,255	0/0:32,0:34:0,101,255
-chr21	36190010	chr21:36190010:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:15:63,0,100	0/1:7,3:12:28,0,87	0/0:11,1:13:0,10,165
-chr21	36191256	chr21:36191256:M	AAAAAAAAAAAAACAAAAAACAGAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	0/1:13,13:26:154,0,153	0/1:15,20:35:255,0,170
-chr21	36192392	chr21:36192392:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:18:164,0,179	0/0:19,0:22:0,60,255	0/1:10,4:14:66,0,231
-chr21	36192694	chr21:36192694:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:20:156,0,92	0/0:39,0:39:0,115,255	0/1:17,9:26:89,0,235
-chr21	36194488	chr21:36194488:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<20>,<23>	.	.	Motif=T	GT:AD:DP:PL	3/4:0,1,1,5,3:11:162,164,175,130,123,122,41,38,41,54,73,79,46,0,121	1/2:1,3,3,2,0:10:43,38,64,16,0,27,11,12,18,113,66,82,55,135,235	0/4:5,0,0,0,5:13:127,142,182,131,164,160,110,155,152,213,0,55,35,104,131
-chr21	36195341	chr21:36195341:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:5:37,0,20	0/0:2,0:3:0,8,44	0/1:4,2:9:20,0,64
-chr21	36199443	chr21:36199443:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,16:45:255,0,255	0/1:24,8:33:107,0,255	0/0:23,0:23:0,69,255
-chr21	36206011	chr21:36206011:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:35:255,66,0	0/1:23,18:44:201,0,255	0/1:14,20:34:255,0,156
-chr21	36206530	chr21:36206530:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,14:27:193,0,122	0/1:8,9:18:111,0,86	0/0:32,0:33:0,97,255
-chr21	36217075	chr21:36217075:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:78,2,0	0/1:5,3:8:26,0,60	1/1:1,6:7:85,3,0
-chr21	36220668	chr21:36220668:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:74,0,65	0/1:13,9:24:104,0,155	1/1:0,19:22:255,61,0
-chr21	36228766	chr21:36228766:M	AAAATAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<10.4>,<11.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,9,0:9:255,27,0,198,27,175	1/2:0,2,7:9:158,107,101,36,0,10	1/1:0,12,0:12:255,36,0,255,35,227
-chr21	36231845	chr21:36231845:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:18:255,54,0	1/1:0,11:14:255,38,0	1/1:0,18:18:255,54,0
-chr21	36236751	chr21:36236751:M	TTTTTTTCTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<45>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:112,20,0	0/1:2,4:6:47,0,15	1/1:0,3:4:61,11,0
-chr21	36241676	chr21:36241676:M	TTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTT	<35>,<36>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,9:15:255,133,115,94,0,55	1/1:0,6,0:6:164,18,0,117,18,101	1/2:0,8,3:12:241,44,17,142,0,112
-chr21	36242152	chr21:36242152:M	ATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:11,0:11:0,32,195	0/1:12,12:24:149,0,149
-chr21	36243350	chr21:36243350:M	TTTTTTTTTCCTTTTCTTCTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:26:0,58,255	0/1:12,5:19:31,0,168	0/0:20,1:22:0,44,255
-chr21	36246844	chr21:36246844:M	TTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTAT	<8.8>,<9.8>	.	.	Motif=TTATG	GT:AD:DP:PL	1/1:0,23,0:24:255,70,0,255,69,255	1/1:0,20,0:21:255,63,0,255,62,255	1/2:0,10,7:17:255,112,82,186,0,139
-chr21	36257588	chr21:36257588:M	TAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAAGTAGTTAGGTAAATAGATAGAT	<14>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:12,4:16:55,0,253	0/1:10,3:13:38,0,212	0/1:11,5:16:80,0,228
-chr21	36260154	chr21:36260154:M	AAAAAGAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:34:243,0,180	1/1:1,30:33:255,79,0	0/1:14,13:27:157,0,175
-chr21	36272650	chr21:36272650:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:3,0,117	0/1:6,3:11:18,0,88	0/0:18,0:18:0,53,255
-chr21	36286640	chr21:36286640:M	ACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,10:20:124,0,124	1/1:0,26:27:255,79,0	0/1:15,13:29:160,0,182
-chr21	36289425	chr21:36289425:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<26.5>,<27.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,0,8:13:255,216,204,255,144,255,147,0,147,123	1/2:1,11,5,1:18:255,77,120,255,0,255,255,78,255,255	2/3:1,0,8,5:15:245,255,255,73,92,48,104,155,0,114
-chr21	36302779	chr21:36302779:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:6:139,18,0	1/1:0,6:6:171,18,0	1/1:0,3:5:99,12,0
-chr21	36305752	chr21:36305752:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:22:0,46,255	0/1:12,11:23:126,0,143	0/1:17,21:38:255,0,196
-chr21	36306937	chr21:36306937:M	AAAAAAAAAAAAAAGAAAAAGAAAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,11:19:145,197,255,0,124,91	1/2:0,10,4:15:209,76,79,169,0,230	0/1:13,13,1:28:161,0,163,218,178,255
-chr21	36307652	chr21:36307652:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:21:0,61,255	0/1:9,6:21:132,0,219	0/1:4,3:10:60,0,101
-chr21	36308874	chr21:36308874:M	TTTATTTATTTATTTATTTATTTATTTATTTATTT	<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:8,5:13:100,0,186	0/1:13,3:16:36,0,255	1/1:0,9:9:254,27,0
-chr21	36309316	chr21:36309316:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:6:19,0,54	0/1:1,1:2:11,0,11	1/1:0,14:16:255,47,0
-chr21	36310424	chr21:36310424:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,14:34:255,0,255	0/0:23,0:23:0,69,255	0/1:26,4:31:31,0,255
-chr21	36313320	chr21:36313320:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,6:24:34,0,243	0/0:18,0:25:0,68,255	0/0:20,3:25:0,9,255
-chr21	36318465	chr21:36318465:M	AAAAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/1:9,9:19:108,0,102	0/0:23,0:23:0,68,255
-chr21	36327156	chr21:36327156:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:3:0,6,45	1/1:0,5:6:159,15,0	0/0:3,0:5:0,9,94
-chr21	36328343	chr21:36328343:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:8:0,23,125	0/1:2,3:6:39,0,13	0/1:8,4:12:27,0,88
-chr21	36328907	chr21:36328907:M	AAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,13:23:255,0,131	0/1:10,8:22:165,0,226	0/1:12,8:24:153,0,255
-chr21	36329295	chr21:36329295:M	AAAAACAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:22:0,65,255	0/1:11,16:30:255,0,236	0/0:22,0:25:0,74,255
-chr21	36331602	chr21:36331602:M	AAAAAAACAAAAAACAAACAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:21:186,0,255	0/1:13,13:27:255,0,255	0/1:17,14:31:255,0,255
-chr21	36332791	chr21:36332791:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10:27:116,0,216	0/1:11,4:17:32,0,154	0/1:16,8:25:71,0,226
-chr21	36335311	chr21:36335311:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:22,0,51	0/1:2,2:7:64,0,43	0/1:6,3:10:72,0,151
-chr21	36343093	chr21:36343093:M	GTTTTTTTGTTTGTTTGTTTG	<5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:24,18:42:255,0,255	0/1:22,18:40:255,0,255	0/1:19,27:46:255,0,255
-chr21	36343450	chr21:36343450:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:26:185,0,255	0/1:14,9:24:184,0,255	0/1:9,18:30:255,0,172
-chr21	36347008	chr21:36347008:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:19:11,0,171	0/0:11,0:15:0,41,221	0/1:7,6:15:62,0,92
-chr21	36350543	chr21:36350543:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,6:16:70,0,115	0/1:10,7:18:77,0,118	0/1:6,8:16:97,0,71
-chr21	36370599	chr21:36370599:M	ATATACATACATACATATATATATATATATATATATATATAT	<18.5>,<20.5>,<21.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,3,1,0:9:47,0,85,46,19,56,52,11,51,67	0/1:1,1,0,0:2:18,0,18,18,5,19,21,5,21,26	2/3:0,0,4,3:8:18,36,143,9,31,11,19,43,0,31
-chr21	36370670	chr21:36370670:M	TTCTTCTTCTTCTT	<6.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:4,3:7:50,0,75	1/1:0,0:1:7,2,0	1/1:0,2:2:47,6,0
-chr21	36371799	chr21:36371799:M	TGTTTTGTTTTGTTTTGTTTTTTTTTTTT	<5.6>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:9,11:20:157,0,118	0/0:17,1:18:0,33,255	0/1:8,12:22:179,0,100
-chr21	36381288	chr21:36381288:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,3:18:255,69,51,240,0,255	0/1:13,17,1:31:211,0,149,255,177,255	1/2:2,10,11:25:255,174,250,157,0,233
-chr21	36382523	chr21:36382523:M	TTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTT	<21>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,5:22:255,103,100,255,0,255	0/2:7,0,4:11:37,69,255,0,120,89	1/2:0,17,8:25:255,140,153,255,0,255
-chr21	36382695	chr21:36382695:M	TTATTATTATTATTATTATTATTATT	<7.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:10,20:30:255,0,105	0/1:11,14:26:188,0,124	0/1:13,16:30:222,0,157
-chr21	36383088	chr21:36383088:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:233,40,0	0/1:3,4:8:48,0,30	1/1:1,10:12:166,17,0
-chr21	36388469	chr21:36388469:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:11:100,0,111	0/1:7,2:11:27,0,159	0/1:3,4:8:92,0,57
-chr21	36389760	chr21:36389760:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/1:9,5:16:86,0,189	0/0:8,0:18:0,32,245
-chr21	36396654	chr21:36396654:M	AAAAAAAAAAGAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,14:27:174,0,156	0/0:39,0:42:0,122,255	0/1:11,12:23:146,0,128
-chr21	36397392	chr21:36397392:M	GTGTGTGTGTGT	<6.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:22,23:45:177,0,163	0/0:57,0:57:0,160,255	0/1:17,31:48:255,0,89
-chr21	36397720	chr21:36397720:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:9,0,26	0/1:3,3:6:33,0,33	0/0:2,0:4:0,11,58
-chr21	36404097	chr21:36404097:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,1:13:0,6,134	0/0:9,0:10:0,26,150	0/1:3,3:8:28,0,52
-chr21	36404400	chr21:36404400:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,9:30:86,0,255	0/0:34,1:36:0,88,255	0/1:12,11:25:125,0,162
-chr21	36404733	chr21:36404733:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:3:29,3,0	1/1:0,2:4:82,12,0	1/1:0,3:6:109,14,0
-chr21	36407301	chr21:36407301:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:14:16,0,141	0/0:12,2:14:0,7,171	0/1:8,6:16:68,0,104
-chr21	36411117	chr21:36411117:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:25:255,71,0	1/1:1,32:34:255,82,0	1/1:0,25:27:255,76,0
-chr21	36417329	chr21:36417329:M	TTTTTTTTCTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/0:33,0:35:0,100,255	0/1:18,24:43:255,0,255
-chr21	36418849	chr21:36418849:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:13:29,0,101	0/0:9,0:9:0,26,155	0/1:12,10:23:118,0,145
-chr21	36420337	chr21:36420337:M	TTCATTCATTCATTCATTCATTCATTCATTCATTCA	<10>,<11>	.	.	Motif=TTCA	GT:AD:DP:PL	0/2:21,0,10:31:202,191,255,0,255,255	1/2:0,10,9:19:255,162,109,154,0,127	0/1:17,21,0:38:255,0,211,255,255,255
-chr21	36433912	chr21:36433912:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18:40:233,0,255	0/0:23,0:26:0,75,255	0/1:11,14:26:182,0,136
-chr21	36436383	chr21:36436383:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:5:47,0,40	0/1:3,3:6:58,0,62	0/1:1,1:2:20,0,21
-chr21	36436914	chr21:36436914:M	ATATATATATA	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:40:255,118,0	0/1:21,18:39:199,0,246	1/1:0,40:40:255,118,0
-chr21	36437842	chr21:36437842:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:19,0:23:0,66,255	0/1:9,5:14:48,0,119
-chr21	36438131	chr21:36438131:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6,1:13:97,0,14,98,6,173	0/2:2,0,5:9:64,83,151,0,28,13	1/2:3,8,3:19:140,15,50,120,0,217
-chr21	36441053	chr21:36441053:M	CCCCGCCCCCACCCCC	<3.7>	.	.	Motif=CCCCAC	GT:AD:DP:PL	0/1:13,4:17:26,0,192	0/1:11,13:24:163,0,127	0/1:9,12:21:161,0,104
-chr21	36442154	chr21:36442154:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:19:18,0,220	0/0:28,1:30:0,70,255	0/1:17,10:29:101,0,229
-chr21	36443922	chr21:36443922:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:8:192,23,0	1/1:0,4:6:128,15,0	1/1:0,6:6:170,18,0
-chr21	36444734	chr21:36444734:M	AAAAAAAAAAAAAAAAAAA	<20>,<25>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,1,4,0:6:94,84,94,0,0,27,97,97,39,134	1/3:1,1,0,3:7:86,67,74,83,73,118,10,0,48,39	1/2:1,3,2,0:9:74,37,40,32,0,83,83,51,90,139
-chr21	36448351	chr21:36448351:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,4:10:64,24,118,0,34,41	0/1:2,3,0:6:68,0,41,50,33,69	0/2:5,0,3:9:25,43,175,0,92,69
-chr21	36448769	chr21:36448769:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:54,0:55:0,162,255	0/1:26,13:39:116,0,255	0/0:51,4:57:0,94,255
-chr21	36449331	chr21:36449331:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,98,255	0/1:13,10:27:201,0,255	0/0:35,0:36:0,108,255
-chr21	36450532	chr21:36450532:M	AAAAAAACAAAACAAAACAAAACAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:11,11:22:236,0,238	0/0:31,0:31:0,93,255
-chr21	36450893	chr21:36450893:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:32:0,75,255	0/1:13,9:23:94,0,178	0/0:34,0:35:0,103,255
-chr21	36451305	chr21:36451305:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3:8:31,53,168,0,66,49	0/1:6,3,2:12:63,0,161,51,67,128	0/2:5,0,3:9:36,52,201,0,84,61
-chr21	36454621	chr21:36454621:M	ACACACACACACACACACACACACACACACACACACACACACAC	<14>,<17>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,20:40:255,255,255,255,0,255	0/2:5,0,10:16:255,255,255,0,125,92	1/2:0,17,10:28:255,255,217,255,0,255
-chr21	36457708	chr21:36457708:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:91,0,31	0/1:3,7:10:89,0,21	0/1:4,6:10:74,0,40
-chr21	36459018	chr21:36459018:M	CAAACAAACAAACAAA	<3>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:14,21:35:255,0,168	0/0:24,0:24:0,71,255	0/1:16,17:33:223,0,204
-chr21	36459962	chr21:36459962:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:26:225,0,252	0/0:17,0:19:0,56,255	0/1:14,6:26:102,0,255
-chr21	36476456	chr21:36476456:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,15:18:252,16,0	1/1:2,24:26:255,41,0	1/1:1,18:20:255,31,0
-chr21	36485854	chr21:36485854:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,19:46:230,0,255	0/0:34,1:39:0,92,255	0/1:22,17:41:183,0,255
-chr21	36488221	chr21:36488221:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<15.5>,<16.5>	.	.	Motif=CCTT	GT:AD:DP:PL	1/1:0,4,0:5:123,12,0,83,12,72	1/2:0,2,0:5:96,22,11,49,0,36	2/2:0,0,3:4:95,61,53,9,9,0
-chr21	36489118	chr21:36489118:M	AAAAAAAAAAAAAAA	<16>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,7:9:246,245,244,27,27,0	1/2:0,3,0:4:39,14,6,32,0,76	1/2:0,2,5:9:146,132,134,12,0,41
-chr21	36490945	chr21:36490945:M	CACAGACACACACACACACACACACACACACACACACACACACAC	<20.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,6,6:12:255,93,75,109,0,75	1/1:0,22,0:24:255,72,0,255,70,255	1/2:0,14,8:25:255,121,70,255,0,221
-chr21	36496437	chr21:36496437:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12,0:15:255,42,0,255,41,238	1/2:0,3,3:6:118,42,33,50,0,33	1/2:0,3,7:12:194,102,87,68,0,39
-chr21	36501924	chr21:36501924:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,114,0	1/1:0,37:40:255,116,0	1/1:1,38:40:255,99,0
-chr21	36514623	chr21:36514623:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,12:14:255,41,0	1/1:0,12:15:255,44,0	1/1:0,8:10:235,25,0
-chr21	36515790	chr21:36515790:M	TTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:118,12,0	1/1:0,4:6:118,13,0	1/1:0,5:6:157,18,0
-chr21	36518076	chr21:36518076:M	ACACACACACACACACACACACACACACACACAC	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,15,20:35:255,255,255,255,0,178	2/2:0,2,29:32:255,255,255,95,58,0	1/1:0,37,0:38:255,114,0,255,112,255
-chr21	36518598	chr21:36518598:M	CAAACAAACAAACAAACAAACAA	<6.8>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,32:34:255,70,0	1/1:0,31:34:255,54,0	1/1:0,36:39:255,69,0
-chr21	36519710	chr21:36519710:M	AAAAACAACAACAACAACAACAACAAAACCCCAAAAACAAAAA	<7.7>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,24:24:255,71,0	1/1:0,30:30:255,89,0	1/1:0,27:30:255,80,0
-chr21	36523760	chr21:36523760:M	AAAGAAAGAAAGAGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	.	1/1:0,4:4:58,11,0	0/0:0,0:3:0,0,0
-chr21	36524115	chr21:36524115:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,33:38:255,55,0	1/1:0,40:40:255,117,0	0/1:18,31:51:255,0,198
-chr21	36532398	chr21:36532398:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,48,0:49:255,126,0,255,144,255	1/1:1,28,0:29:255,67,0,255,84,255	1/2:1,30,18:49:255,255,255,255,0,255
-chr21	36535390	chr21:36535390:M	AAATAAATACATAAATAAATAAAAGTAAAAAATAAA	<8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:0,28:29:255,82,0	0/1:11,18:31:240,0,114
-chr21	36537630	chr21:36537630:M	TTTTTTCTTTGTTTTTCTTTTCTTTTCTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:172,18,0	1/1:0,1:2:29,3,0	0/0:19,0:19:0,57,255
-chr21	36537990	chr21:36537990:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,17,10:39:255,184,150,255,0,255	1/2:0,21,6:35:255,145,54,255,0,255	0/1:17,16,0:35:255,0,255,255,255,255
-chr21	36539312	chr21:36539312:M	GAGTGAGTGCGTGTGGAGTGTGTGTGGAGTGAGTGTGTGTGGAGTGAGTGTATGTGCGGAGTGAGTGTGTGTGGAGTGAGTG	<2.2>	.	.	Motif=GAGT	GT:AD:DP:PL	1/1:1,18:19:255,32,0	1/1:0,18:22:255,54,0	1/1:1,14:19:255,20,0
-chr21	36552674	chr21:36552674:M	AAAACAAGACAAAAACAAAACAAAACAAAACAAAACAAAA	<7>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,24:24:255,71,0	1/1:0,48:48:255,142,0
-chr21	36555807	chr21:36555807:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,4:23:255,98,34,155,0,90	1/1:0,15,5:24:255,71,0,212,9,145	1/2:0,13,7:25:255,131,60,149,0,75
-chr21	36555851	chr21:36555851:M	GAGAGAGAGAGAG	<8.5>,<9.5>	.	.	Motif=GA	GT:AD:DP:PL	2/2:0,0,4:5:137,82,69,15,14,0	2/2:0,0,5:7:183,111,93,21,20,0	1/2:0,6,1:8:178,26,3,84,0,62
-chr21	36555863	chr21:36555863:M	GTGTGTGTGTGTGTG	<6.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,16:21:130,0,1	0/1:8,15:23:109,0,29	0/1:16,17:34:116,0,93
-chr21	36559173	chr21:36559173:M	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<5.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,24:25:255,74,0	1/1:0,35:35:255,105,0	1/1:0,31:31:255,93,0
-chr21	36560224	chr21:36560224:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:2,42:45:255,97,0	1/1:2,43:48:255,104,0
-chr21	36562698	chr21:36562698:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:43:255,126,0	1/1:0,40:43:255,122,0	1/1:0,43:48:255,135,0
-chr21	36565422	chr21:36565422:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:22:255,66,0	1/1:0,33:37:255,104,0	1/1:0,43:47:255,132,0
-chr21	36569416	chr21:36569416:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:34:0,95,255	0/0:31,0:31:0,93,255	0/1:15,7:23:123,0,255
-chr21	36573301	chr21:36573301:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:14:255,11,0	1/1:1,11:18:255,14,0	0/1:9,3:12:48,0,222
-chr21	36577422	chr21:36577422:M	AAAAAAAAAAAAGAAAAGAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,24:27:255,42,0	1/1:1,26:27:255,62,0	1/1:0,27:27:255,79,0
-chr21	36585863	chr21:36585863:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<11.2>,<13.2>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:9,11,0:23:233,0,171,236,112,255	0/1:3,8,0:11:180,0,45,171,37,188	0/2:3,0,5:10:48,54,160,0,27,13
-chr21	36595125	chr21:36595125:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:4:84,11,0	1/1:0,4:6:142,18,0	0/1:1,1:4:29,0,30
-chr21	36597906	chr21:36597906:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	1/1:0,7:9:141,26,0	0/1:4,6:12:80,0,47
-chr21	36598426	chr21:36598426:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,3:35:0,45,255	0/1:17,14:31:154,0,207	0/0:25,0:25:0,74,255
-chr21	36601775	chr21:36601775:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,1,42:44:255,255,255,111,111,0	2/2:0,1,30:31:255,255,255,91,73,0	1/2:0,21,22:43:255,255,255,255,0,255
-chr21	36603712	chr21:36603712:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:39,0:41:0,122,255	0/0:26,0:26:0,78,255	0/1:17,9:28:179,0,255
-chr21	36612458	chr21:36612458:M	TTATATTATATTATATTATATTATATTAT	<7.8>,<10.8>	.	.	Motif=TTATA	GT:AD:DP:PL	1/2:0,5,3:8:223,85,69,139,0,132	1/1:0,2,0:4:86,12,0,86,11,86	2/2:0,0,5:5:156,156,156,15,15,0
-chr21	36615947	chr21:36615947:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:30:255,78,0	1/1:0,31:31:255,91,0	1/1:0,50:50:255,147,0
-chr21	36623256	chr21:36623256:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:1,25:29:255,64,0	1/1:0,29:30:255,88,0
-chr21	36629951	chr21:36629951:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:62,0,89	0/1:4,3:8:48,0,72	0/0:11,0:16:0,41,255
-chr21	36629976	chr21:36629976:M	AAAGAAAGAAAGAAAG	<2.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:13,2:15:4,0,255	0/1:15,5:20:59,0,255	0/1:28,4:32:1,0,255
-chr21	36630329	chr21:36630329:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:7:22,0,45	0/1:5,5:11:46,0,58	0/0:12,2:16:0,11,168
-chr21	36634376	chr21:36634376:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:8:131,8,0	1/1:0,2:3:54,6,0	0/0:3,0:6:0,12,97
-chr21	36635067	chr21:36635067:M	TTTTTGTTTTATTTTAGTTTTTGTTTT	<3>	.	.	Motif=TTTTAG	GT:AD:DP:PL	0/1:9,12:23:255,0,155	0/1:14,6:21:104,0,255	0/0:25,1:27:0,49,255
-chr21	36638487	chr21:36638487:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:73,9,0	1/1:0,4:6:127,15,0	0/1:1,2:7:73,0,14
-chr21	36640229	chr21:36640229:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,11:21:255,205,147,160,0,127	1/2:2,18,20:40:255,255,241,234,0,226	0/1:28,18,0:46:197,0,255,255,255,255
-chr21	36644630	chr21:36644630:M	ATATATATATATGTGTATATATATATGTATATGTATGTATATATATGTGTATATAT	<29>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,6:16:96,23,0	1/1:0,6:9:79,18,0	0/0:9,1:13:0,12,95
-chr21	36644685	chr21:36644685:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:19,0,9:29:190,143,255,0,255,255	0/1:8,15,0:24:255,0,158,224,204,255	0/2:22,0,16:38:255,233,255,0,255,255
-chr21	36645694	chr21:36645694:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<11.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,5,15:20:255,255,255,137,0,93	1/2:0,3,4:8:145,77,110,80,0,65	0/1:13,2,1:16:13,0,255,37,209,225
-chr21	36645755	chr21:36645755:M	TATATATATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:14:207,138,111,35,30,0	2/2:0,0,8:13:144,93,78,14,18,0	1/1:3,14,3:21:139,25,0,87,16,122
-chr21	36645772	chr21:36645772:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<12.5>,<15.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,13,10:24:255,115,197,255,0,255	1/2:0,6,9:18:255,110,198,165,0,135	0/1:9,9,6:28:206,0,255,160,20,216
-chr21	36649303	chr21:36649303:M	TTTTTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,6:14:255,118,151,173,0,152	1/2:0,1,4:6:95,69,101,36,0,24	0/2:3,0,5:9:77,99,228,0,54,28
-chr21	36650763	chr21:36650763:M	AAAAAAAAAAGAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,14:36:162,0,255	0/1:17,11:29:118,0,213	0/0:30,0:30:0,88,255
-chr21	36651873	chr21:36651873:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:15,13:30:166,0,202	0/1:20,6:26:35,0,255	0/1:18,5:24:24,0,255
-chr21	36656169	chr21:36656169:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,23:46:255,0,255	0/1:24,20:44:227,0,255	0/0:35,0:35:0,103,255
-chr21	36657147	chr21:36657147:M	AAAAAAAAAAAAAAAA	<17>,<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,4,2:9:171,90,69,46,0,28,89,25,18,97	2/3:0,1,10,2:14:255,214,183,41,26,5,170,126,0,143	0/3:8,0,0,9:18:214,235,255,157,255,255,0,149,221,198
-chr21	36657951	chr21:36657951:M	AAAAAAAAAAAAAAAACAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,5:16:255,80,46,143,0,137	1/2:0,3,5:8:167,84,62,43,0,28	0/2:5,1,5:11:110,71,129,0,72,113
-chr21	36658195	chr21:36658195:M	TTTATTTATTTTTTATATATTTATATATTTATAAATATTTTTATTTATTTATT	<14>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:5,5:10:78,0,75	1/1:0,1:1:22,3,0	1/1:0,1:3:22,3,0
-chr21	36659451	chr21:36659451:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,9:16:113,0,61	1/1:1,14:17:236,33,0	0/1:14,3:17:1,0,190
-chr21	36661240	chr21:36661240:M	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	<7.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,11:12:160,34,0	1/1:0,15:15:199,42,0	0/1:5,5:10:39,0,39
-chr21	36661504	chr21:36661504:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:8:131,41,26,66,0,48	1/1:0,6,1:7:160,18,0,98,5,79	0/2:4,0,4:8:41,53,150,0,64,41
-chr21	36661524	chr21:36661524:M	AAGAAGAAGAAGAAAAAGAAAAGAA	<10.3>	.	.	Motif=AAG	GT:AD:DP:PL	0/0:9,0:10:0,27,218	0/0:15,0:15:0,45,255	0/1:7,5:16:70,0,189
-chr21	36664510	chr21:36664510:M	ACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11,0:16:152,35,0,187,38,255	1/1:0,13,0:22:188,44,0,233,48,255	1/2:2,5,6:14:145,108,135,47,0,148
-chr21	36664552	chr21:36664552:M	AGAGAGAGAAAGAGCGAGAGAGA	<13.5>,<16.5>,<18.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,0,9,18:27:255,255,255,255,255,255,209,209,0,140	2/3:0,0,8,5:13:255,255,255,115,115,81,183,183,0,154	1/3:0,10,1,15:27:255,255,255,255,255,255,229,0,231,209
-chr21	36665099	chr21:36665099:M	TCTCTCTCTCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:11,12:30:255,0,167	0/1:6,8:19:166,0,83	0/1:11,17:37:255,0,177
-chr21	36665121	chr21:36665121:M	TTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,17:25:255,0,2	1/1:0,17:21:255,28,0	0/1:10,14:26:255,0,208
-chr21	36665702	chr21:36665702:M	ATATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13,0:23:197,35,0,226,34,255	1/1:0,6,0:9:97,22,0,111,23,138	2/2:0,2,10:18:20,39,214,2,5,0
-chr21	36665725	chr21:36665725:M	TTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,9:15:255,221,201,29,15,0	1/2:0,1,3:6:110,71,62,23,0,10	1/1:0,8,1:13:242,26,0,184,2,167
-chr21	36668367	chr21:36668367:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,7:21:67,109,255,0,183,188	0/2:14,1,6:22:51,94,255,0,186,191	0/1:16,13,0:30:157,0,200,240,241,255
-chr21	36672834	chr21:36672834:M	ACACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/0:31,1:33:0,79,255	0/1:15,10:25:88,0,169	0/0:23,0:24:0,70,255
-chr21	36673359	chr21:36673359:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,17:30:235,0,132	0/0:25,2:30:0,49,255	0/0:24,2:27:0,33,255
-chr21	36675129	chr21:36675129:M	TTTTTTTTTCTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,32:33:255,97,0	1/1:0,33:33:255,97,0
-chr21	36690462	chr21:36690462:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:8:62,0,21	0/1:4,7:12:80,0,42	0/1:1,7:10:92,0,0
-chr21	36700284	chr21:36700284:M	TTTCTCTCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTCCTCTTTCTTTCATTCT	<18.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,11:11:131,30,0	1/1:0,6:6:71,16,0	1/1:0,10:10:119,27,0
-chr21	36702943	chr21:36702943:M	AAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,11,0:26:123,0,188,197,255,255	1/2:0,6,5:11:213,128,110,102,0,147	0/0:27,0,0:28:0,82,255,84,255,255
-chr21	36716861	chr21:36716861:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,11:30:118,0,255	0/1:15,8:25:77,0,202	0/0:36,0:37:0,108,255
-chr21	36719947	chr21:36719947:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,14:29:180,0,198	0/1:16,18:34:222,0,186	0/0:39,0:39:0,115,255
-chr21	36733561	chr21:36733561:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:19:99,0,107	0/1:10,13:24:153,0,111	0/0:24,1:29:0,66,255
-chr21	36736712	chr21:36736712:M	CTTCCTTCCCTTCCTTCCCTCCTTCCCTTCC	<9>	.	.	Motif=CTTC	GT:AD:DP:PL	0/0:29,0:30:0,82,255	0/1:12,11:27:73,0,115	0/0:22,0:24:0,65,255
-chr21	36739982	chr21:36739982:M	AGAAAGAAGAGAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA	<15.8>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:4,2:6:39,0,95	1/1:0,5:6:128,4,0	0/0:9,0:9:0,27,255
-chr21	36744312	chr21:36744312:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:16:112,0,76	0/0:9,0:11:0,29,161	0/1:12,4:16:22,0,161
-chr21	36758984	chr21:36758984:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:25:0,55,255	0/1:18,8:26:64,0,240	0/0:37,1:39:0,96,255
-chr21	36760610	chr21:36760610:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:20:0,58,255	0/0:15,1:19:0,33,250	0/1:12,9:22:94,0,156
-chr21	36771997	chr21:36771997:M	AAAAAAAAAAAACAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,79,255	0/1:19,11:31:109,0,237	0/0:31,0:32:0,94,255
-chr21	36772639	chr21:36772639:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:46,0,18	1/1:0,1:2:28,6,0	0/0:9,1:11:0,15,147
-chr21	36772980	chr21:36772980:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,1,4:13:34,53,201,0,103,117	1/2:1,4,2:7:68,19,38,53,0,96	0/0:8,1,0:9:0,9,123,26,126,153
-chr21	36781260	chr21:36781260:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10,0:20:133,0,103,187,136,255	1/1:2,11,0:18:199,15,0,237,45,255	0/2:11,1,11:23:125,172,255,0,144,137
-chr21	36783796	chr21:36783796:M	TGCACATGCACACACACACATGCACATACACA	<5.7>	.	.	Motif=TGCACA	GT:AD:DP:PL	0/1:9,16:34:63,0,10	0/1:11,14:35:48,0,25	0/0:29,0:39:0,67,218
-chr21	36784312	chr21:36784312:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:14:0,25,255	0/1:12,13:28:255,0,255	0/0:12,1:18:0,4,255
-chr21	36786284	chr21:36786284:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,25:48:255,0,250	0/1:15,23:40:255,0,157	0/0:37,2:40:0,81,255
-chr21	36796869	chr21:36796869:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:18,2:22:0,28,255	0/1:12,13:27:178,0,142
-chr21	36801783	chr21:36801783:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,1,0:51:0,119,255,148,255,255	0/1:18,16,0:35:193,0,215,255,255,255	0/2:30,1,19:52:218,255,255,0,255,255
-chr21	36803755	chr21:36803755:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,40:42:255,103,0	1/1:1,39:42:255,105,0	1/1:1,36:38:255,94,0
-chr21	36808047	chr21:36808047:M	AAAATAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:30:255,70,0	1/1:0,33:35:255,102,0	1/1:1,38:40:255,99,0
-chr21	36816396	chr21:36816396:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:39:218,0,255	0/0:38,2:43:0,82,255	1/1:5,32:40:255,26,0
-chr21	36823611	chr21:36823611:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<25>	.	.	Motif=GT	GT:AD:DP:PL	0/2:4,0,3:11:87,78,181,0,105,96	0/0:22,0,0:26:0,77,255,77,255,255	1/2:0,4,8:15:255,209,188,118,0,89
-chr21	36827574	chr21:36827574:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:24:184,0,93	0/0:23,1:25:0,56,255	1/1:1,14:16:239,29,0
-chr21	36827798	chr21:36827798:M	TTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,11:20:144,0,106	0/0:12,1:13:0,21,192	1/1:0,10:11:170,23,0
-chr21	36828367	chr21:36828367:M	GAATGAATGAATGAATGAATGAATGAATGAATGAATGAGTGAATAAATG	<11.2>,<14.2>	.	.	Motif=GAAT	GT:AD:DP:PL	0/2:18,0,7:25:127,181,255,0,255,255	0/1:11,11,0:22:136,0,136,199,198,255	0/2:8,0,6:14:132,157,255,0,148,188
-chr21	36830822	chr21:36830822:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:5,0,11	1/1:0,3:6:57,5,0	.
-chr21	36833594	chr21:36833594:M	TATATATATATATATATATAT	<12>,<14>	.	.	Motif=TA	GT:AD:DP:PL	0/0:18,0,1:20:0,56,255,31,255,255	0/0:14,0,0:14:0,42,255,42,255,255	1/2:0,8,7:16:255,178,149,195,0,196
-chr21	36838299	chr21:36838299:M	CACACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:17,0:19:0,56,255	0/0:30,0:30:0,90,255	0/1:19,13:37:253,0,255
-chr21	36838704	chr21:36838704:M	AAAAGAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,16:27:205,0,93	0/0:27,2:29:0,52,255	1/1:1,23:28:255,52,0
-chr21	36848272	chr21:36848272:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,7:18:76,0,143	0/0:15,2:21:0,26,255	1/1:2,16:19:255,20,0
-chr21	36855369	chr21:36855369:M	AAAAATAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:24,2:27:0,43,255	0/1:18,10:28:101,0,248
-chr21	36855537	chr21:36855537:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:14:255,42,0	0/0:2,0:2:0,6,54	1/1:1,16:17:255,24,0
-chr21	36862946	chr21:36862946:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:29:0,83,255	0/0:26,0:29:0,81,255	0/1:13,8:24:154,0,255
-chr21	36866207	chr21:36866207:M	GGGAAGGGAATGGTAAGGGAAGGG	<5>	.	.	Motif=GGGAA	GT:AD:DP:PL	1/1:0,31:31:255,86,0	1/1:0,28:28:255,77,0	1/1:0,48:48:255,133,0
-chr21	36866841	chr21:36866841:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,19:33:248,0,149	0/0:26,1:31:0,60,255	0/1:22,17:43:176,0,255
-chr21	36869098	chr21:36869098:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:9,9:19:127,0,118	0/0:8,0:8:0,24,145	1/1:0,15:15:255,44,0
-chr21	36874405	chr21:36874405:M	AAAATAAAATAAAATAAAATAAAATAAAATAAATAAATTAAAA	<8.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:14,1:15:0,23,255	0/0:18,0:18:0,54,255	1/1:0,8:8:169,24,0
-chr21	36879916	chr21:36879916:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:23:111,0,167	0/0:17,2:24:0,34,255	0/1:17,14:32:172,0,215
-chr21	36880955	chr21:36880955:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>,<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:6,14,0:20:215,0,58,255,100,255	0/2:11,0,10:21:121,180,255,0,170,140	0/1:11,18,0:29:255,0,123,255,178,255
-chr21	36886433	chr21:36886433:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	0/1:1,2:4:25,0,7	0/1:1,0:2:6,0,11
-chr21	36887130	chr21:36887130:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:19:135,0,90	1/1:0,18:20:255,58,0	0/1:6,13:22:174,0,63
-chr21	36888433	chr21:36888433:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,6,0:8:51,0,0,57,21,85	0/1:2,4,0:6:31,0,7,37,24,77	1/2:0,1,3:4:70,36,25,10,0,1
-chr21	36888446	chr21:36888446:M	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,4:9:124,0,8	1/1:0,1:3:44,7,0	0/0:0,0:1:0,1,3
-chr21	36888495	chr21:36888495:M	TATTTATTTATTTATTT	<6.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:2,6:8:141,0,32	.	0/1:3,0:5:9,0,70
-chr21	36894847	chr21:36894847:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,20:49:229,0,255	0/0:29,0:31:0,90,255	1/1:3,34:39:255,59,0
-chr21	36906050	chr21:36906050:M	AAAAAAAAAAAAAAACAAAACAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:15:0,42,255	0/0:16,0:19:0,51,255	0/1:2,5:8:117,0,28
-chr21	36906678	chr21:36906678:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:4,13,10:28:255,116,215,177,0,255	0/2:7,2,11:20:130,152,255,0,67,82	1/1:1,23,0:24:255,53,0,255,69,255
-chr21	36908392	chr21:36908392:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:33:105,0,255	0/0:29,0:31:0,90,255	1/1:1,21:24:255,52,0
-chr21	36910547	chr21:36910547:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:27:252,0,255	0/0:31,0:31:0,93,255	1/1:0,25:29:255,78,0
-chr21	36911749	chr21:36911749:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:53,6,0	0/1:0,0:1:0,0,0	1/1:0,4:4:111,12,0
-chr21	36912072	chr21:36912072:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:12:36,0,107	0/0:14,2:17:0,14,205	0/1:13,6:20:46,0,179
-chr21	36917951	chr21:36917951:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:33:203,0,183	0/0:30,1:34:0,82,255	1/1:2,26:30:255,51,0
-chr21	36926742	chr21:36926742:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:71,0,0	0/1:2,8:11:115,0,2	0/1:6,1:9:2,0,89
-chr21	36931284	chr21:36931284:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:8:241,24,0	1/1:0,5:6:150,15,0	1/1:0,1:2:45,6,0
-chr21	36933552	chr21:36933552:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,6,2:10:169,13,16,97,0,90	2/2:0,0,4:4:68,68,68,12,12,0	1/2:0,6,6:13:246,88,67,111,0,77
-chr21	36942399	chr21:36942399:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:69,9,0	1/1:0,11:12:255,36,0	1/1:0,6:8:193,23,0
-chr21	36943818	chr21:36943818:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:139,0,109	1/1:2,15:21:255,25,0	0/1:10,12:23:154,0,117
-chr21	36948292	chr21:36948292:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:9:83,0,20	0/1:4,11:17:161,0,20	0/1:8,5:16:53,0,114
-chr21	36950180	chr21:36950180:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,29:54:255,0,255	1/1:0,45:45:255,132,0	0/1:21,20:41:252,0,255
-chr21	36950638	chr21:36950638:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:26:211,0,133	1/1:0,26:26:255,76,0	0/1:18,21:39:255,0,221
-chr21	36954744	chr21:36954744:M	AAAAAAACAAAACAAAACAAAACAAAACAAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,10:32:98,0,255	1/1:0,26:26:255,77,0	0/1:13,17:30:230,0,156
-chr21	36957053	chr21:36957053:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:15:160,0,70	1/1:0,20:25:255,63,0	0/1:4,6:13:138,0,73
-chr21	36958254	chr21:36958254:M	AAAGAAAGAAAGAAAGAAAGAAA	<6.8>,<8.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/2:13,0,8:26:255,255,255,0,210,255	1/2:0,6,8:30:255,255,255,67,0,162	0/1:13,8,0:24:74,0,167,144,236,255
-chr21	36960132	chr21:36960132:M	CCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,5:5:141,15,0	1/1:0,13:13:255,39,0	1/1:0,7:7:192,21,0
-chr21	36965732	chr21:36965732:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/1:17,10:27:99,0,223	0/0:29,1:32:0,73,255
-chr21	36965919	chr21:36965919:M	TGTTTTTTTTGTTTTGTTTT	<5>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:16,8:24:83,0,237	1/1:0,23:23:255,68,0	0/1:11,20:31:255,0,115
-chr21	36969582	chr21:36969582:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,22:31:255,0,82	1/1:0,22:25:255,71,0	0/1:11,21:37:255,0,210
-chr21	36970994	chr21:36970994:M	AAAAAAAAAAAAAGAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,14:32:255,0,255	1/1:0,18:19:255,54,0	0/1:11,8:20:153,0,240
-chr21	36973055	chr21:36973055:M	AAAAAAAAACAAAACA	<3.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:19,23:42:255,0,255	1/1:0,27:28:255,84,0	0/1:24,14:41:255,0,255
-chr21	36983837	chr21:36983837:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:84,15,0	1/1:0,2:2:32,6,0	0/1:1,2:4:32,0,5
-chr21	36985770	chr21:36985770:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5:22:50,0,177	0/0:31,3:37:0,56,255	0/1:23,9:35:78,0,255
-chr21	36989010	chr21:36989010:M	TTTTAATTTTATTTTATTTTATTTATTTATTTATTTATTTTTTTT	<8.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:9,7:16:109,0,155	0/1:5,10:15:179,0,68	0/1:13,13:27:214,0,212
-chr21	36992242	chr21:36992242:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,19:29:255,0,102	0/1:18,19:37:229,0,211	0/1:15,21:36:255,0,170
-chr21	36993289	chr21:36993289:M	AAACAAACAAACAAACAAA	<5.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:22,19:41:247,0,255	0/1:12,11:23:132,0,151	0/1:23,21:44:255,0,255
-chr21	36995250	chr21:36995250:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:43:255,126,0	1/1:0,49:49:255,147,0	1/1:0,49:49:255,147,0
-chr21	36996415	chr21:36996415:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,18:27:253,0,66	0/1:12,13:25:150,0,133	0/1:12,16:28:200,0,130
-chr21	36996511	chr21:36996511:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:19:189,0,220	0/1:10,8:18:166,0,221	0/1:21,13:34:255,0,255
-chr21	36998164	chr21:36998164:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:34:212,0,202	0/1:7,11:18:138,0,69	0/1:11,23:35:255,0,104
-chr21	37002773	chr21:37002773:M	TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:9:46,0,64	0/1:5,4:11:48,0,65	0/1:4,7:12:92,0,38
-chr21	37004922	chr21:37004922:M	TTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:6:30,0,69	0/1:5,9:18:237,0,103	0/1:2,3:7:79,0,43
-chr21	37005243	chr21:37005243:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:2,19:24:255,35,0	0/1:3,10:13:137,0,15
-chr21	37008757	chr21:37008757:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:81,3,0	1/1:0,7:9:140,26,0	1/1:0,10:10:173,29,0
-chr21	37009235	chr21:37009235:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,28:55:255,0,255	0/1:23,22:46:255,0,255	0/1:17,27:44:255,0,183
-chr21	37010993	chr21:37010993:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,13:30:255,225,255,255,0,255	1/2:0,15,11:26:255,192,234,255,0,255	1/2:1,13,16:32:255,255,255,229,0,255
-chr21	37012213	chr21:37012213:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATT	<12.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/2:5,0,10:15:146,187,255,0,81,51	0/2:4,0,6:10:78,106,213,0,60,42	1/2:0,13,2:15:233,36,13,237,0,255
-chr21	37012864	chr21:37012864:M	TTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,8:10:204,0,12	1/1:0,4:5:127,15,0	1/1:0,7:9:201,15,0
-chr21	37015876	chr21:37015876:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:14:0,30,207	0/1:14,7:22:55,0,183	0/1:8,8:17:90,0,100
-chr21	37017153	chr21:37017153:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,6:15:243,95,73,87,0,90	1/2:2,4,3:10:101,25,33,23,0,62	1/2:0,5,3:9:135,44,28,65,0,64
-chr21	37019265	chr21:37019265:M	AAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:24:255,0,67	1/1:0,10:16:255,31,0	1/1:0,17:23:255,28,0
-chr21	37022163	chr21:37022163:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:62,0,70	0/1:5,0:7:3,0,63	0/1:5,2:7:14,0,65
-chr21	37026043	chr21:37026043:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,15:25:220,0,97	0/1:11,17:29:227,0,112	0/1:16,20:36:255,0,190
-chr21	37026491	chr21:37026491:M	GAGAGAGAGAGAGA	<6>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,43:44:255,129,0	1/1:0,58:58:255,171,0
-chr21	37039780	chr21:37039780:M	CCTTCCCTTTCCCTTCCCTCTCCTTTCCTCTCCTTTCCTCTCTTTTCCTCTCCTTTCCTTTCCTTTCCT	<5.4>	.	.	Motif=CCTTT	GT:AD:DP:PL	0/1:2,2:4:60,0,37	0/1:1,3:4:105,0,12	0/1:1,2:3:57,0,16
-chr21	37042969	chr21:37042969:M	TATTTATTTATTTATTTATTTATTTATTT	<5.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	0/1:10,11:21:239,0,214	1/1:0,34:34:255,102,0
-chr21	37043739	chr21:37043739:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,0,1:11:0,30,255,15,187,157	0/2:9,0,5:15:42,69,255,0,148,109	0/1:4,5,2:12:124,0,84,64,39,101
-chr21	37044386	chr21:37044386:M	CCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	1/2:0,4,3:7:137,53,34,61,0,52	0/2:3,0,2:5:41,33,71,0,51,72	1/2:0,7,4:11:208,70,39,104,0,92
-chr21	37045161	chr21:37045161:M	TTTTTTTTTGTTGTTTGTTTTTG	<3.3>	.	.	Motif=TTTTGT	GT:AD:DP:PL	1/1:0,47:47:255,141,0	0/1:17,19:36:255,0,255	1/1:0,34:34:255,102,0
-chr21	37045634	chr21:37045634:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,46:51:255,93,0	0/1:18,23:42:255,0,206	1/1:0,33:33:255,97,0
-chr21	37051655	chr21:37051655:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:7,5:12:50,0,84	1/1:1,11:12:174,18,0
-chr21	37052860	chr21:37052860:M	TATATATATAT	<4.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,6:6:107,18,0	0/0:29,1:30:0,71,255	1/1:0,3:3:53,9,0
-chr21	37052870	chr21:37052870:M	TGTGTGTGTATGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:45:255,133,0	0/1:25,15:44:255,0,255	1/1:0,27:31:255,92,0
-chr21	37054515	chr21:37054515:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:28:255,81,0	0/1:11,7:19:75,0,134	0/1:7,11:19:140,0,78
-chr21	37056958	chr21:37056958:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:25:255,69,0	0/1:11,10:24:226,0,230	1/1:0,27:30:255,89,0
-chr21	37061892	chr21:37061892:M	AAAAAAAAAAAAAATAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,21,10:32:255,172,255,255,0,255	1/1:0,28,0:29:255,85,0,255,87,255	2/2:1,0,21:22:255,255,255,47,63,0
-chr21	37066972	chr21:37066972:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,28,26:57:255,255,255,255,0,255	2/2:0,0,19:22:255,255,255,63,63,0	1/1:0,32,0:32:255,96,0,255,96,255
-chr21	37068011	chr21:37068011:M	TTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:1,31:33:255,79,0	1/1:0,40:41:255,120,0
-chr21	37068208	chr21:37068208:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,21:30:255,0,71	1/1:1,32:35:255,84,0	0/0:52,0:52:0,153,255
-chr21	37073316	chr21:37073316:M	GCTGCTGCTGCTGCTGC	<7.7>	.	.	Motif=GCT	GT:AD:DP:PL	1/1:0,21:25:255,63,0	1/1:1,31:35:255,71,0	1/1:0,38:40:255,114,0
-chr21	37075167	chr21:37075167:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	0/1:4,10:14:133,0,29	1/1:1,18:19:255,38,0
-chr21	37076695	chr21:37076695:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:11:255,33,0	1/1:0,9:14:255,36,0	0/0:0,0:1:0,0,0
-chr21	37080369	chr21:37080369:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,31:52:255,0,255	1/1:0,38:38:255,114,0	0/0:46,1:54:0,113,255
-chr21	37081866	chr21:37081866:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:27:255,0,250	0/0:28,0:35:0,93,255	1/1:0,14:15:255,42,0
-chr21	37084992	chr21:37084992:M	CAAACAAACAAACAAACAAAC	<7.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:9,14:24:255,0,175	1/1:0,28:29:255,84,0	0/0:35,0:35:0,105,255
-chr21	37089985	chr21:37089985:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:40:216,0,255	1/1:1,22:24:255,52,0	0/0:35,1:37:0,90,255
-chr21	37090468	chr21:37090468:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,26:49:255,0,255	0/0:26,2:31:0,35,255	1/1:0,44:46:255,135,0
-chr21	37091565	chr21:37091565:M	TTTATTATTTATTTATTTATTTATTTATTTATTT	<7.5>,<10.5>,<11.5>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,18,10,0:32:255,255,237,255,0,255,255,207,255,255	2/3:0,0,3,4:8:203,205,207,73,73,50,62,63,0,42	1/1:0,29,0,0:31:255,89,0,255,90,255,255,90,255,255
-chr21	37093380	chr21:37093380:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:10:73,0,39	0/0:4,0:5:0,14,77	0/1:1,4:5:53,0,2
-chr21	37095138	chr21:37095138:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,5:24:84,0,255	1/1:0,14:17:255,47,0	0/0:28,0:29:0,87,255
-chr21	37101352	chr21:37101352:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,13,0:28:255,0,255,255,255,255	0/1:12,16,2:32:255,0,255,255,171,255	0/2:8,0,16:24:216,255,255,0,142,73
-chr21	37101919	chr21:37101919:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,12:36:253,0,255	1/1:0,2:2:60,6,0	0/0:37,0:37:0,111,255
-chr21	37104589	chr21:37104589:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:5:111,17,14,99,0,98	1/1:0,3,0:3:81,9,0,82,9,84	0/2:1,0,3:4:38,49,99,0,17,5
-chr21	37107077	chr21:37107077:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,17:39:201,0,255	1/1:0,31:34:255,96,0	0/0:23,2:26:0,40,255
-chr21	37115175	chr21:37115175:M	ATAATAATAATAATAATAATAATAATAA	<10.3>,<11.3>,<12.3>	.	.	Motif=ATA	GT:AD:DP:PL	1/3:0,17,0,8:25:255,218,165,255,150,255,255,0,255,255	3/3:0,0,1,11:12:255,255,255,215,214,181,36,33,17,0	1/2:0,12,11,0:23:255,204,138,190,0,157,255,174,222,255
-chr21	37118116	chr21:37118116:M	TTTTTCTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,49:50:255,147,0	1/1:0,37:37:255,109,0	1/1:0,55:55:255,162,0
-chr21	37122405	chr21:37122405:M	ATATATATATATATAATATATATATATATATATTATATATATATATATA	<7.5>,<13>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,3,17:20:255,255,255,76,0,25	2/2:0,0,10:10:255,255,255,30,30,0	1/1:0,5,0:5:140,15,0,140,15,140
-chr21	37122954	chr21:37122954:M	TGTGTGTGTGTGTGTG	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,38:39:255,115,0	1/1:0,37:37:255,111,0
-chr21	37126042	chr21:37126042:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:163,0,163	0/0:32,2:35:0,67,255	1/1:3,28:33:255,42,0
-chr21	37132327	chr21:37132327:M	TTTTTTTTCTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,2,12:24:183,153,255,0,147,117	0/0:33,0,3:36:0,99,255,53,255,255	1/2:0,3,8:11:199,123,114,54,0,22
-chr21	37134449	chr21:37134449:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:194,0,183	0/0:37,0:39:0,114,255	1/1:0,38:38:255,112,0
-chr21	37150054	chr21:37150054:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:37:255,0,174	0/1:19,20:43:255,0,220	1/1:2,35:39:255,78,0
-chr21	37152380	chr21:37152380:M	TTTTTTTTTTTTGTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,6:12:74,0,74	0/0:4,0:5:0,14,80	1/1:0,19:22:255,64,0
-chr21	37156043	chr21:37156043:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,13:30:155,0,231	0/0:41,0:43:0,126,255	1/1:2,38:40:255,81,0
-chr21	37156207	chr21:37156207:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,19:33:255,0,249	0/0:38,0:40:0,119,255	1/1:0,46:46:255,138,0
-chr21	37161104	chr21:37161104:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,24:51:255,0,255	0/0:42,0:44:0,128,255	1/1:1,32:35:255,84,0
-chr21	37164341	chr21:37164341:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:20:98,0,144	0/0:26,2:29:0,50,255	1/1:3,25:32:255,38,0
-chr21	37175100	chr21:37175100:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,9:22:101,0,175	0/0:23,0:24:0,70,255	1/1:2,18:21:255,25,0
-chr21	37175264	chr21:37175264:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,4:6:108,76,92,0,27,12	0/0:6,0,0:6:0,18,177,18,177,177	1/2:0,3,8:11:255,133,102,51,0,18
-chr21	37184630	chr21:37184630:M	TTTTTTTTTTTTTTTTTTT	<18>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,2:6:38,49,108,0,69,101	0/1:11,6,0:18:59,0,132,109,184,255	2/2:0,0,4:4:111,111,111,12,12,0
-chr21	37190121	chr21:37190121:M	TTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	.	.	1/1:0,3:5:102,12,0
-chr21	37192492	chr21:37192492:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,4:16:255,102,65,255,0,255	0/1:11,8,0:20:176,0,255,206,255,255	2/2:0,0,11:11:255,255,255,33,33,0
-chr21	37193366	chr21:37193366:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,21:45:255,255,255,255,0,255	0/1:26,18,0:47:185,0,255,255,255,255	2/2:0,1,41:43:255,255,255,126,108,0
-chr21	37196227	chr21:37196227:M	TTTTTTCTTTCTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:14:104,0,69	0/1:10,5:15:43,0,128	1/1:2,18:20:255,23,0
-chr21	37197755	chr21:37197755:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,11:39:219,0,255	0/0:34,0:36:0,105,255	1/1:1,19:25:255,32,0
-chr21	37198851	chr21:37198851:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,29:54:255,0,255	0/0:38,2:40:0,82,255	1/1:0,49:49:255,145,0
-chr21	37204423	chr21:37204423:M	TGTGTGTGTGTGTGTGTGTGTG	<10>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,28:29:255,85,0	1/1:0,29:30:255,88,0
-chr21	37207073	chr21:37207073:M	AAAAAACAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,39:40:255,99,0	1/1:0,29:29:255,85,0	1/1:1,30:34:255,81,0
-chr21	37212896	chr21:37212896:M	AAAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAG	<7.2>,<13.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:10,3,2:16:46,0,255,57,83,130	0/0:27,1,0:31:0,16,255,71,255,255	1/2:0,4,8:12:154,83,191,92,0,71
-chr21	37212994	chr21:37212994:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:12:21,0,82	0/1:5,2:8:12,0,61	0/0:10,2:15:0,6,149
-chr21	37214385	chr21:37214385:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,1:6:17,23,117,0,85,75	0/0:5,0,0:6:0,18,164,15,150,144	1/2:0,5,3:8:213,52,29,87,0,64
-chr21	37215269	chr21:37215269:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5,0:12:129,0,126,95,132,212	0/0:2,0,0:5:0,14,95,9,76,69	1/2:0,5,3:8:217,52,29,87,0,64
-chr21	37216209	chr21:37216209:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:20:71,0,163	0/0:15,0:16:0,46,255	1/1:2,25:30:255,51,0
-chr21	37229022	chr21:37229022:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,22:39:255,0,207	0/1:14,22:36:255,0,144	0/0:48,1:49:0,126,255
-chr21	37235011	chr21:37235011:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/1:13,15:28:184,0,149	0/0:29,0:31:0,82,255
-chr21	37235852	chr21:37235852:M	TATATATATATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,11:16:255,48,0	1/1:0,9:12:255,24,0	1/1:0,9:13:255,39,0
-chr21	37235880	chr21:37235880:M	TTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:26:183,0,255	1/1:0,10:13:255,37,0	0/1:17,13:32:255,0,255
-chr21	37239604	chr21:37239604:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:144,0,180	0/1:10,9:19:101,0,118	0/1:13,11:26:133,0,160
-chr21	37248335	chr21:37248335:M	GGGGGTGGGGGGAGGGGGGG	<13>	.	.	Motif=G	GT:AD:DP:PL	0/1:7,31:38:255,0,68	0/0:7,0:7:0,21,193	1/1:0,48:48:255,144,0
-chr21	37250900	chr21:37250900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,6:15:66,0,112	0/0:11,0:12:0,35,202	0/1:1,6:9:83,0,5
-chr21	37255852	chr21:37255852:M	TTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:107,14,0	0/1:5,6:15:151,0,116	.
-chr21	37261654	chr21:37261654:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:40:255,0,219	0/1:22,14:37:139,0,255	0/0:42,1:43:0,109,255
-chr21	37274998	chr21:37274998:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.5>,<12.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:7,0,6:14:79,106,255,0,104,98	0/2:7,0,3:10:26,54,190,0,107,98	0/1:8,8,0:16:106,0,104,152,128,255
-chr21	37275958	chr21:37275958:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:27:255,80,0	0/1:20,18:38:209,0,244	1/1:0,38:38:255,112,0
-chr21	37277526	chr21:37277526:M	AAAACAAAAACAAAAACAAAAAACAAACAAACAAAAA	<7>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,29:29:255,87,0	0/1:12,12:24:251,0,251	1/1:0,29:29:255,87,0
-chr21	37278234	chr21:37278234:M	CCCCCCCCCGCCCCCCC	<18>,<20>	.	.	Motif=C	GT:AD:DP:PL	2/2:0,0,7:7:210,206,202,21,21,0	1/2:0,7,3:12:187,89,66,114,0,164	2/2:0,0,5:6:151,147,144,15,15,0
-chr21	37284569	chr21:37284569:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<10.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:0,5:12:120,0,29	0/0:12,0:17:0,19,255	0/1:0,14:28:255,0,0
-chr21	37284597	chr21:37284597:M	TTTTTTTTTTTTTTTTTTTT	<21>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,1:8:56,21,20,36,0,111	0/0:1,0,0:2:0,5,23,6,29,56	1/2:1,7,3:12:159,98,87,71,0,184
-chr21	37293474	chr21:37293474:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:5:18,0,35	1/1:0,5:8:96,9,0	0/1:5,2:7:15,0,68
-chr21	37296540	chr21:37296540:M	TTTTTTTTTTTTTTT	<14>,<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,15,3,9:27:255,248,235,255,110,255,255,0,255,255	1/2:4,14,10,1:29:255,123,238,184,0,255,255,167,255,255	2/3:0,0,3,15:18:255,255,255,255,255,219,46,55,0,1
-chr21	37303361	chr21:37303361:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,1:37:0,90,255	0/1:15,10:26:100,0,188	0/0:33,0:34:0,99,255
-chr21	37308460	chr21:37308460:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:6:27,0,6	0/0:3,0:3:0,8,32	0/0:3,0:3:0,8,32
-chr21	37309286	chr21:37309286:M	TATTTATTTATTTATTTATTTATTTATTTATTATTT	<10>,<11>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,9,0:27:91,0,255,145,255,255	0/2:5,0,8:14:185,140,197,0,90,105	1/1:0,19,0:22:255,46,0,255,61,255
-chr21	37318424	chr21:37318424:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:5:0,15,85	0/0:5,1:6:0,1,65	0/1:1,5:10:77,0,11
-chr21	37318980	chr21:37318980:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,3,11:27:124,145,255,0,148,191	0/1:14,16,0:30:191,0,156,255,204,255	2/2:1,0,22:25:255,255,255,55,71,0
-chr21	37321432	chr21:37321432:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	<6.5>,<8.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:5,16,0:23:255,0,91,255,137,255	0/2:2,0,8:12:209,213,255,0,54,28	1/1:0,21,0:24:255,66,0,255,66,255
-chr21	37321983	chr21:37321983:M	GTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:5,19,12,0:36:255,143,255,255,0,255,255,236,255,255	0/1:9,17,0,0:26:224,0,81,255,132,255,255,157,255,255	2/3:2,0,13,13:28:255,255,255,199,231,154,163,236,0,185
-chr21	37325022	chr21:37325022:M	TCTCTCTCTCTCTCTCTCTCT	<12.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,12:25:201,0,202	0/1:1,22:28:255,0,2	0/0:31,0:34:0,95,255
-chr21	37327340	chr21:37327340:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,6:14:199,71,69,57,0,90	1/2:0,11,7:19:255,111,69,151,0,140	1/2:3,10,5:19:227,45,47,97,0,154
-chr21	37330840	chr21:37330840:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:31:164,0,127	0/1:18,12:32:98,0,188	0/1:25,14:41:101,0,255
-chr21	37331534	chr21:37331534:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,22:47:255,0,255	0/1:15,16:32:192,0,175	0/1:24,17:42:199,0,255
-chr21	37332171	chr21:37332171:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:11:217,52,59,173,0,164	1/2:0,1,1:5:74,16,14,58,0,54	1/2:0,7,2:14:255,43,31,231,0,222
-chr21	37340818	chr21:37340818:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:10,3:14:11,0,137	0/1:7,6:14:74,0,81
-chr21	37341121	chr21:37341121:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,10:33:90,0,246	0/0:24,2:28:0,49,255	0/1:9,8:17:80,0,96
-chr21	37341131	chr21:37341131:M	AAAGAAAGAAAGAAAGAAAG	<4.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:22,6:36:0,5,40	0/0:25,0:26:0,37,96	1/1:0,5:13:42,17,0
-chr21	37345516	chr21:37345516:M	AAATAAATAAATAAATAAATAAAATAAA	<6>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:17,20:37:255,0,219	0/0:40,0:40:0,118,255	1/1:0,41:41:255,121,0
-chr21	37346955	chr21:37346955:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:35:255,0,149	0/0:28,1:31:0,70,255	1/1:2,40:46:255,88,0
-chr21	37352837	chr21:37352837:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:15:212,25,0	0/1:4,5:11:61,0,45	1/1:0,7:7:120,20,0
-chr21	37360872	chr21:37360872:M	CTCTCTCTCTCTCTCTCTCT	<11>	.	.	Motif=CT	GT:AD:DP:PL	0/1:19,22:41:255,0,241	0/0:30,0:30:0,88,255	1/1:0,35:36:255,103,0
-chr21	37362853	chr21:37362853:M	AAAAAAAAAAAAAAGGAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,6:18:63,0,141	0/1:9,5:17:56,0,105	0/0:27,1:28:0,65,255
-chr21	37372278	chr21:37372278:M	AAAAAACAAAACAAAACAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:21:255,62,0	0/1:10,13:23:163,0,110	1/1:0,20:20:255,59,0
-chr21	37372449	chr21:37372449:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:19:151,0,71	0/0:22,2:25:0,29,255	1/1:2,19:21:255,27,0
-chr21	37375520	chr21:37375520:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:48,9,0	1/1:0,4:5:80,14,0	1/1:0,0:1:1,1,0
-chr21	37383833	chr21:37383833:M	GTGTATGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,10:26:194,0,255	0/0:35,0:37:0,110,255	1/1:0,27:27:255,81,0
-chr21	37388101	chr21:37388101:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2,0:5:74,1,0,56,5,59	1/2:1,10,4:16:255,50,90,254,0,250	0/1:2,1,0:4:33,0,52,34,35,61
-chr21	37388655	chr21:37388655:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,21:35:255,0,151	0/1:16,18:34:221,0,185	0/0:29,2:31:0,55,255
-chr21	37389039	chr21:37389039:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,3:20:0,10,226	0/0:40,1:41:0,103,255	1/1:0,4:4:64,12,0
-chr21	37389914	chr21:37389914:M	TTTTGTTTTTTGTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,11:30:110,0,235	0/1:9,8:18:93,0,102	0/0:24,0:25:0,73,255
-chr21	37394227	chr21:37394227:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,20:37:255,0,207	0/0:38,2:41:0,85,255	1/1:1,40:41:255,103,0
-chr21	37396521	chr21:37396521:M	TTTTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,35:36:255,88,0	0/1:22,14:38:149,0,255	1/1:2,43:45:255,96,0
-chr21	37398077	chr21:37398077:M	ATATATATATATATTTATATTTATATATTTTTGTATATTTTATATTTATATATGTGTATATATATATAT	<33>,<34>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,6,2:17:75,0,120,54,37,71	.	0/2:10,0,6:17:5,48,236,0,77,32
-chr21	37398344	chr21:37398344:M	AAAAAAAAAAAAATAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,1:50:0,129,255	0/1:11,14:25:172,0,120	0/0:23,0:23:0,68,255
-chr21	37398905	chr21:37398905:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,8:20:173,0,211	0/1:13,11:26:226,0,255	0/0:25,0:31:0,71,255
-chr21	37401483	chr21:37401483:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,10:24:111,0,183	0/1:10,8:18:85,0,119	0/0:20,0:21:0,61,255
-chr21	37403635	chr21:37403635:M	AAAAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,18:27:255,219,146,84,0,5	0/1:12,5,0:22:81,0,255,23,255,255	2/2:0,1,29:31:255,255,255,82,71,0
-chr21	37403664	chr21:37403664:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,12:25:255,142,68,149,0,77	0/1:4,7,0:13:172,0,90,86,109,174	2/2:0,4,25:29:255,255,235,87,33,0
-chr21	37408006	chr21:37408006:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,19:43:230,0,255	0/0:45,0:45:0,132,255	1/1:1,42:43:255,109,0
-chr21	37417494	chr21:37417494:M	TTTTTTATTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:10:228,29,0	1/1:1,8:9:181,3,0	.
-chr21	37426755	chr21:37426755:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:230,38,0	0/1:6,6:12:69,0,69	1/1:1,13:15:223,26,0
-chr21	37433045	chr21:37433045:M	ATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,17:35:233,0,189	0/0:19,1:20:0,41,255	1/1:3,21:25:255,16,0
-chr21	37440131	chr21:37440131:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,0,0	.	0/1:1,3:5:85,0,15
-chr21	37441963	chr21:37441963:M	TTTTTTTTTTTTTT	<12>,<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,21,4,1:49:255,0,255,255,255,255,255,255,255,255	2/3:0,1,15,8:26:255,255,255,148,212,177,255,244,0,255	0/0:38,0,0,1:39:0,117,255,115,255,255,97,255,255,255
-chr21	37446582	chr21:37446582:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:27:255,42,0	0/1:21,17:42:196,0,255	1/1:2,27:30:255,52,0
-chr21	37451346	chr21:37451346:M	CTCCGTCCCTCCATCCCTCCCTCCCTCCATCCCTCCC	<11.5>	.	.	Motif=CTCC	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/1:10,5:15:79,0,207	0/0:23,0:23:0,69,255
-chr21	37452758	chr21:37452758:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	0/1:2,4:7:91,0,38	1/1:1,15:21:255,28,0
-chr21	37454086	chr21:37454086:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,0,0	1/1:0,6:6:163,18,0	.
-chr21	37455020	chr21:37455020:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,6:12:194,88,75,43,0,51	0/0:5,1,0:8:0,6,90,20,107,166	0/2:3,3,6:12:145,59,78,0,7,58
-chr21	37457014	chr21:37457014:M	TTACTTACTTACTTACTTACTTACTTA	<1.8>,<8.8>	.	.	Motif=TTAC	GT:AD:DP:PL	0/2:6,0,6:19:95,124,255,0,144,122	0/1:4,8,0:14:172,0,95,190,106,255	0/2:2,0,17:26:255,255,255,0,72,5
-chr21	37457038	chr21:37457038:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<8.8>,<9.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:16,0,8:24:147,128,255,0,255,255	1/2:0,6,7:13:255,110,73,95,0,57	0/0:17,0,0:17:0,51,255,51,255,255
-chr21	37458269	chr21:37458269:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<22.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,16,0,0:18:255,54,0,255,54,255,255,54,255,255	1/3:0,13,0,8:22:255,222,180,255,132,255,255,0,255,255	1/2:0,14,8,0:25:255,229,183,255,0,255,255,145,255,255
-chr21	37463204	chr21:37463204:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<14>,<20>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,19,22,0:42:255,255,255,255,0,255,255,255,255,255	2/3:0,0,12,9:23:255,255,255,255,255,255,207,255,0,255	1/1:0,24,0,0:24:255,72,0,255,72,255,255,72,255,255
-chr21	37467102	chr21:37467102:M	AAAAGAAAAAAAAAAAAAAACAAAACAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:26:255,58,0	1/1:0,17:17:255,50,0	1/1:0,23:24:255,70,0
-chr21	37476819	chr21:37476819:M	CCCCCCCCCCCC	<13>,<14>	.	.	Motif=C	GT:AD:DP:PL	0/0:14,1,0:15:0,26,239,42,255,255	0/2:4,4,18:26:255,250,248,0,9,45	0/1:7,4,0:13:34,0,108,60,138,246
-chr21	37484330	chr21:37484330:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14:15:255,44,0	0/1:10,7:18:68,0,128	1/1:1,12:13:195,20,0
-chr21	37489634	chr21:37489634:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:36:255,67,0	0/1:15,11:27:231,0,255	1/1:1,30:40:255,58,0
-chr21	37494946	chr21:37494946:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,27:29:255,48,0	1/1:0,24:25:255,73,0	1/1:1,38:40:255,99,0
-chr21	37495153	chr21:37495153:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<21>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,26,0:27:255,81,0,255,81,255	1/2:0,17,8:27:255,225,170,255,0,255	1/1:0,19,0:19:255,57,0,255,57,255
-chr21	37512925	chr21:37512925:M	TTTTTTTTTTTTCTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,13:29:255,181,158,252,0,188	0/1:9,6,0:16:136,0,206,110,151,222	2/2:1,0,22:23:255,255,255,50,67,0
-chr21	37526664	chr21:37526664:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,22:25:255,19,0	0/1:12,3:15:8,0,163	1/1:1,16:19:255,37,0
-chr21	37529451	chr21:37529451:M	TGGATGGATGGATGGATGGA	<3>,<4>	.	.	Motif=TGGA	GT:AD:DP:PL	1/1:0,11,1:15:255,41,0,191,28,156	0/0:12,0,0:12:0,36,255,33,181,149	1/2:0,7,5:14:210,51,24,104,0,69
-chr21	37537906	chr21:37537906:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<13.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10,0:11:255,32,0,225,32,199	1/2:0,8,11:19:255,166,142,142,0,88	1/1:0,12,0:13:255,39,0,255,38,233
-chr21	37545384	chr21:37545384:M	TAAATAAATAAATAAAGTAATAAATA	<5.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:20,16:36:255,0,255	0/1:16,17:33:255,0,255	0/0:35,0:35:0,105,255
-chr21	37545510	chr21:37545510:M	TGTGTGTGTGTGTG	<6>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,107,0	0/1:14,27:41:255,0,134	1/1:0,42:42:255,124,0
-chr21	37563876	chr21:37563876:M	CGTCCCCGTCCGCGTCCGC	<4.2>	.	.	Motif=CGTCCG	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:34,0:34:0,102,255	0/1:18,14:32:255,0,255
-chr21	37565447	chr21:37565447:M	CTTTCTTTCTTTCCTTTCTTCCTTCCTTTTTTTTTTCTTT	<6.5>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:19,7:30:136,0,255	0/1:11,5:18:83,0,255	0/1:16,3:29:71,0,255
-chr21	37565473	chr21:37565473:M	TTTTTTTTTTCTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:10:0,29,164	0/1:5,2:7:12,0,61	0/1:9,3:12:15,0,115
-chr21	37567973	chr21:37567973:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:135,0,154	0/0:14,0:15:0,44,254	0/1:10,9:19:106,0,124
-chr21	37572299	chr21:37572299:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:47,0,47	0/0:6,1:7:0,4,84	0/1:5,1:6:0,0,69
-chr21	37579027	chr21:37579027:M	TTTTTGTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,17:26:238,0,88	0/0:14,1:15:0,27,226	0/1:10,9:21:101,0,134
-chr21	37581954	chr21:37581954:M	AAAAAAAAACAAAAAACAAAAACAAAAA	<4.3>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,44:44:255,132,0	1/1:0,38:38:255,114,0
-chr21	37585793	chr21:37585793:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/0:35,2:39:0,78,255	0/1:28,31:59:255,0,255
-chr21	37597085	chr21:37597085:M	TTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:32:0,76,255	0/0:33,1:38:0,73,255	0/1:13,5:20:122,0,255
-chr21	37607464	chr21:37607464:M	ATATATATATATATATATAT	<15.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,6:10:255,70,40,47,0,18	0/2:7,0,2:11:44,31,223,0,199,191	0/1:10,2,0:15:50,0,244,44,255,255
-chr21	37612725	chr21:37612725:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:22:255,65,0	0/1:2,8:16:225,0,20	0/1:6,14:26:255,0,82
-chr21	37614360	chr21:37614360:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:27,0:27:0,79,255	0/1:12,9:22:103,0,135	0/1:16,10:26:97,0,197
-chr21	37614751	chr21:37614751:M	TGTGTGTGTATGCATGTGTCTGTGTGTATGTGTGTGTGTATGCATGTGTCTGTGTGTGTATTTGTGTGTATGTGTGTGTGT	<34>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:9:91,0,84	0/0:3,0:4:0,9,79	0/0:6,0:6:0,18,158
-chr21	37615245	chr21:37615245:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	.	1/1:0,7:7:195,21,0
-chr21	37616591	chr21:37616591:M	ATATATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,6:12:130,11,0	1/1:0,8:11:164,30,0	1/1:0,0:3:0,0,0
-chr21	37617170	chr21:37617170:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	<10.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,3:4:100,9,0	1/1:0,4:5:124,12,0	0/0:0,0:4:0,1,2
-chr21	37626131	chr21:37626131:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,13,13:29:255,193,159,160,0,181	0/2:22,2,13:38:255,194,255,0,255,255	0/1:19,18,0:39:212,0,253,255,255,255
-chr21	37630135	chr21:37630135:M	TGTGTGTGTGTGTGTGTGTGTGTGGTGT	<18>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,5:19:255,131,90,255,0,255	0/2:14,0,8:24:181,223,255,0,255,255	0/1:17,12,0:30:255,0,255,255,255,255
-chr21	37634762	chr21:37634762:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:10,13:26:173,0,110	0/1:16,19:37:246,0,191
-chr21	37645018	chr21:37645018:M	TTTTTTTTTTTTTTTTTT	<14>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,7:16:146,176,255,0,210,186	1/2:0,10,3:14:255,76,58,255,0,251	0/1:7,11,0:25:255,0,166,255,185,255
-chr21	37649921	chr21:37649921:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11,2:13:255,33,0,204,1,169	1/1:0,23,0:24:255,72,0,255,70,255	1/2:0,13,8:22:255,123,82,241,0,183
-chr21	37654106	chr21:37654106:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,10:16:119,0,10	0/1:3,2:9:26,0,42	0/1:6,1:9:1,0,74
-chr21	37654415	chr21:37654415:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:34:0,100,255	0/1:25,17:47:173,0,255	0/1:21,18:44:205,0,255
-chr21	37655180	chr21:37655180:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<19>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,3,12:18:255,135,89,48,13,0	1/2:0,3,3:9:160,29,11,29,0,11	1/2:0,9,7:16:255,70,22,88,0,40
-chr21	37655225	chr21:37655225:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<18.5>,<22.5>,<23.5>	.	.	Motif=GA	GT:AD:DP:PL	1/3:0,8,0,5:15:255,147,123,255,76,255,210,0,208,192	2/3:0,0,3,8:12:255,255,255,106,106,70,52,52,0,17	1/2:0,10,11,1:23:255,255,255,255,0,226,255,141,249,255
-chr21	37661799	chr21:37661799:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:32:255,95,0	1/1:0,29:29:255,85,0	1/1:0,42:42:255,124,0
-chr21	37663464	chr21:37663464:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,46:47:255,120,0	0/1:22,23:45:255,0,255	0/1:18,36:55:255,0,186
-chr21	37664793	chr21:37664793:M	TTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,2:7:189,35,14,87,0,67	0/1:2,4,1:9:106,0,47,41,36,85	1/2:1,3,8:14:237,91,105,7,0,18
-chr21	37669569	chr21:37669569:M	TGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,10:27:255,255,233,255,0,255	0/1:9,20,0:32:255,0,66,255,159,255	0/2:12,0,11:25:252,255,255,0,220,255
-chr21	37677690	chr21:37677690:M	TCCATCCATTTATCCATTCATTCAATCCATCCATCCATCCA	<33.8>	.	.	Motif=TCCA	GT:AD:DP:PL	0/1:19,10:29:37,0,255	0/0:16,5:21:0,1,255	0/0:22,4:26:0,29,255
-chr21	37677771	chr21:37677771:M	TCCATCCATCCATCCATCCACCCACCTATCCACCCACCCATCCA	<33.8>	.	.	Motif=TCCA	GT:AD:DP:PL	1/1:0,10:10:122,28,0	1/1:0,5:5:61,14,0	1/1:0,4:4:49,11,0
-chr21	37684349	chr21:37684349:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:255,0,200	1/1:2,27:32:255,57,0	0/1:9,25:42:255,0,124
-chr21	37688121	chr21:37688121:M	TTCTTCTTCTT	<2.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:20,19:39:253,0,255	0/1:18,24:42:255,0,203	0/0:62,0:62:0,183,255
-chr21	37690770	chr21:37690770:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:17:0,14,236	0/1:11,10:22:117,0,125	0/1:4,8:13:114,0,33
-chr21	37698699	chr21:37698699:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,7:21:67,0,187	1/1:2,17:19:255,21,0	0/1:7,4:12:38,0,100
-chr21	37701396	chr21:37701396:M	TGTGTGTGTGTGTGTG	<9>,<10>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,21,13:34:255,249,153,255,0,255	0/2:24,0,21:47:255,255,255,0,255,255	0/1:18,15,0:34:186,0,243,243,255,255
-chr21	37702235	chr21:37702235:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:7:118,0,11	1/1:0,1:1:27,3,0	0/1:1,3:6:73,0,16
-chr21	37704661	chr21:37704661:M	TCATCATCATCATCATCATCATCATC	<9.7>,<10.7>	.	.	Motif=TCA	GT:AD:DP:PL	1/2:0,15,12:27:255,224,148,241,0,205	0/2:20,0,10:30:199,174,255,0,255,255	1/1:0,27,0:27:255,80,0,255,80,255
-chr21	37709147	chr21:37709147:M	AAAGGAAAGGAA	<2.6>	.	.	Motif=AAAGG	GT:AD:DP:PL	0/1:30,19:49:255,0,255	0/0:40,0:40:0,120,255	1/1:0,44:44:255,132,0
-chr21	37709515	chr21:37709515:M	AAAAAAAAGAAAAGAAAAGAAAAGAAA	<6.4>,<7.6>	.	.	Motif=AAAAG	GT:AD:DP:PL	1/1:0,13,0:13:254,39,0,255,39,255	2/2:0,0,12:12:255,255,255,36,36,0	1/1:0,31,0:31:255,92,0,255,93,255
-chr21	37716380	chr21:37716380:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:27:140,0,192	0/0:27,1:32:0,76,255	0/1:4,20:27:255,0,2
-chr21	37720693	chr21:37720693:M	TTTTCTTTTCTTTTTTTTTTTTTTTT	<24>,<25>,<27>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,2,5,3:10:144,96,119,54,45,60,112,55,0,152	1/3:1,6,0,3:10:183,35,74,138,81,164,146,0,101,156	2/2:2,1,13,0:16:211,190,241,11,29,0,252,255,42,255
-chr21	37727459	chr21:37727459:M	GTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:1,24:25:255,56,0	1/1:2,23:25:255,36,0
-chr21	37728699	chr21:37728699:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:21,16:39:255,0,255	0/0:25,0:28:0,80,255	1/1:2,39:43:255,72,0
-chr21	37731101	chr21:37731101:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTG	<17>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,21:21:255,255,255,62,63,0	1/2:0,11,6:20:255,113,123,213,0,255	2/2:0,0,32:32:255,255,255,94,96,0
-chr21	37737463	chr21:37737463:M	GTTTGTTTGTTT	<2>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:29,16:45:158,0,255	0/0:48,0:48:0,142,255
-chr21	37739914	chr21:37739914:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,29:59:255,0,255	1/1:1,35:38:255,81,0	0/1:32,26:59:255,0,255
-chr21	37745073	chr21:37745073:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<14>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16,0:17:255,48,0,255,39,255	2/2:0,0,3:4:98,98,98,12,12,0	1/1:0,13,1:15:255,42,0,255,17,255
-chr21	37764384	chr21:37764384:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:21:255,53,0	0/1:15,8:27:142,0,255	1/1:0,18:23:255,57,0
-chr21	37769413	chr21:37769413:M	TTATTATTATTATTATTATTATTATTATTATTA	<9>,<10>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,15,19:34:255,255,255,255,0,190	0/2:3,0,6:9:82,92,170,0,54,28	1/2:0,15,16:31:255,255,210,255,0,191
-chr21	37796767	chr21:37796767:M	CTTTCTTTCTTTCTTT	<6.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:10,6:16:126,0,246	0/0:14,0:14:0,42,255	1/1:0,9:14:255,26,0
-chr21	37814897	chr21:37814897:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3:14:11,0,150	0/0:11,1:14:0,2,143	0/1:3,8:13:120,0,13
-chr21	37818194	chr21:37818194:M	GTGTGTGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>,<27>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,9,4:16:255,43,91,242,0,255	2/2:2,0,17:20:255,255,255,24,60,0	1/1:0,9,0:12:255,30,0,255,30,255
-chr21	37819247	chr21:37819247:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,25:36:255,0,101	0/0:48,2:51:0,114,255	0/1:30,27:57:255,0,255
-chr21	37819800	chr21:37819800:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:26:255,68,0	1/1:0,27:32:255,94,0	0/1:13,14:30:255,0,255
-chr21	37826612	chr21:37826612:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:40:239,0,255	0/1:30,22:52:237,0,255	0/0:41,0:41:0,121,255
-chr21	37835805	chr21:37835805:M	ACCCTAACCCTAACCCTAACCCTAACCCTAACCCT	<4.8>	.	.	Motif=ACCCTA	GT:AD:DP:PL	0/1:6,19:25:255,0,42	0/0:26,0:26:0,77,255	0/1:15,17:32:226,0,188
-chr21	37837714	chr21:37837714:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,17:40:232,0,250	0/0:26,1:27:0,61,255	0/1:19,17:36:206,0,242
-chr21	37844065	chr21:37844065:M	TTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,10,0:35:182,0,255,185,255,255	0/0:33,0,0:35:0,105,255,105,255,255	1/2:0,9,10:19:255,180,126,161,0,108
-chr21	37846354	chr21:37846354:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<19>,<20>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,9,0,0:16:255,255,240,178,0,151,255,157,177,255,255,247,167,255,255	2/4:0,0,12,1,5:18:255,255,255,141,141,102,255,255,123,255,255,255,0,184,255	1/3:0,8,0,12,0:21:255,255,255,255,196,255,229,0,217,192,255,255,255,229,255
-chr21	37847391	chr21:37847391:M	CTGCACCTGCAC	<1.8>	.	.	Motif=CTGCAC	GT:AD:DP:PL	1/1:0,25:26:255,72,0	1/1:0,21:21:255,58,0	1/1:0,23:23:255,64,0
-chr21	37850958	chr21:37850958:M	ATTGATTGATTGATT	<2.8>	.	.	Motif=ATTG	GT:AD:DP:PL	1/1:0,5:6:76,17,0	0/0:28,2:30:0,58,255	0/0:25,1:26:0,60,255
-chr21	37851900	chr21:37851900:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,11:31:115,0,255	0/0:30,1:33:0,79,255	0/1:22,16:38:181,0,255
-chr21	37853146	chr21:37853146:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:15:81,0,99	0/1:20,11:34:99,0,255	0/0:32,1:37:0,89,255
-chr21	37853836	chr21:37853836:M	ATATATATATGTATATATATATATATA	<16.5>,<20.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,16,6:23:255,175,127,255,0,255	2/2:0,0,1:1:31,31,31,3,3,0	0/1:9,7,0:16:167,0,216,194,237,255
-chr21	37859488	chr21:37859488:M	TATATATATATATATATATATATATATATATATATATATATATA	<13>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:5:146,15,0	.	1/1:0,2:2:60,6,0
-chr21	37863847	chr21:37863847:M	TTTTTTTTTTTTTGTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,11:13:255,36,0	1/1:0,5:8:154,18,0
-chr21	37864114	chr21:37864114:M	TTTTTTTTTTTTGTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:133,0,255	0/1:20,17:38:193,0,244	0/1:24,14:40:139,0,255
-chr21	37864862	chr21:37864862:M	TCTCTCTCTCT	<7.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,15:33:255,0,255	0/1:16,11:32:179,0,255	0/1:18,16:38:255,0,255
-chr21	37864872	chr21:37864872:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:26:82,0,120	0/1:10,5:17:26,0,95	0/1:11,12:29:89,0,121
-chr21	37878265	chr21:37878265:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:39:0,95,255	0/0:39,0:40:0,117,255	0/1:17,19:38:249,0,204
-chr21	37879715	chr21:37879715:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,10,0:24:255,0,136,175,148,255	0/2:4,3,6:15:141,36,121,0,53,54	0/1:6,6,0:18:156,0,146,90,127,185
-chr21	37880101	chr21:37880101:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:27:237,0,255	0/1:16,10:28:202,0,255	1/1:0,17:22:255,54,0
-chr21	37881471	chr21:37881471:M	GAGAGAGAGAGAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	0/1:18,13:32:163,0,250	0/1:13,18:31:233,0,142	1/1:0,37:43:255,122,0
-chr21	37891265	chr21:37891265:M	ACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:51,0:51:0,153,255	0/0:43,0:43:0,129,255	0/1:19,14:33:255,0,255
-chr21	37898583	chr21:37898583:M	AAAAGAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:13:0,38,236	0/1:14,15:30:172,0,164	0/0:21,0:24:0,69,255
-chr21	37903723	chr21:37903723:M	AAAAACAAAACAAAACAAAACAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:33,0:33:0,97,255	0/1:18,14:33:170,0,237
-chr21	37914009	chr21:37914009:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<24.5>,<25.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,2,4:8:173,141,127,70,68,49,26,20,0,3	2/3:0,0,3,5:8:188,146,128,61,59,38,37,29,0,14	1/3:0,3,0,6:9:186,133,113,99,70,82,35,0,34,43
-chr21	37914917	chr21:37914917:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,84,255	0/0:39,3:43:0,73,255	0/1:19,21:40:255,0,225
-chr21	37922389	chr21:37922389:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1:35:0,84,255	0/0:26,2:28:0,47,255	0/1:22,13:38:130,0,255
-chr21	37930956	chr21:37930956:M	GTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:27:0,81,255	0/0:28,0:29:0,87,255	0/1:14,9:24:178,0,255
-chr21	37939632	chr21:37939632:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,45:47:255,102,0	1/1:3,48:53:255,92,0	1/1:1,62:68:255,170,0
-chr21	37943341	chr21:37943341:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:13:40,0,102	0/1:7,6:13:62,0,79	0/1:10,5:16:49,0,125
-chr21	37955096	chr21:37955096:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:26,16:42:175,0,255	0/0:37,0:42:0,122,255	0/1:28,18:48:190,0,255
-chr21	37966370	chr21:37966370:M	CACACACACACACACACACACACACACACA	<19>	.	.	Motif=CA	GT:AD:DP:PL	0/0:32,0:34:0,99,255	0/1:16,16:35:255,0,255	0/0:29,0:31:0,93,255
-chr21	37970197	chr21:37970197:M	TGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTG	<30>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,13:13:223,38,0	1/1:1,5:10:66,1,0	1/1:1,6:7:84,4,0
-chr21	37980924	chr21:37980924:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:30:0,87,255	0/1:17,31:55:255,0,255	0/0:28,0:29:0,87,255
-chr21	37981360	chr21:37981360:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:73,0,1	1/1:0,1:1:17,3,0	0/0:2,0:4:0,2,37
-chr21	37987430	chr21:37987430:M	TATGTATGTATGTATGTATGTATGTATGCATGCATGCGTGTGTGTGTGTATGTATGTATGTATGTATGTATGTAT	<12.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:3,0:3:0,9,87	1/1:0,3:5:111,15,0	0/0:6,0:7:0,18,173
-chr21	37987502	chr21:37987502:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<13.2>,<14.2>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,0,12:12:255,209,175,36,34,0	1/2:0,9,8:18:255,112,62,127,0,87	2/2:0,0,22:22:255,255,255,66,63,0
-chr21	37987932	chr21:37987932:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:41:255,121,0	0/1:21,27:50:255,0,236	1/1:0,42:44:255,129,0
-chr21	37990432	chr21:37990432:M	AGGAAGGAAGGAAGGAAGGA	<4>	.	.	Motif=AGGA	GT:AD:DP:PL	1/1:0,13:13:167,36,0	0/0:14,3:17:0,9,139	1/1:0,6:6:77,17,0
-chr21	37990451	chr21:37990451:M	AGAAAGAAAAGAAAAAGAAAGAAGAAAG	<11>,<11.5>	.	.	Motif=AGAA	GT:AD:DP:PL	1/1:0,16,4:20:255,60,0,229,1,169	0/1:13,4,1:19:102,0,255,42,255,255	1/2:0,12,5:18:255,72,21,171,0,120
-chr21	37993413	chr21:37993413:M	TGTGTGTGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,42:45:255,127,0	0/1:23,13:38:92,0,205	1/1:0,44:44:255,125,0
-chr21	37993429	chr21:37993429:M	TATATATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,25:36:255,20,0	0/0:29,5:37:0,33,255	0/1:15,14:37:103,0,150
-chr21	38011592	chr21:38011592:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:22:255,51,0	0/1:9,6:20:127,0,218	1/1:0,16:19:255,53,0
-chr21	38022063	chr21:38022063:M	ACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/0:21,0:22:0,64,255	0/1:8,7:15:76,0,93	0/0:31,0:33:0,96,255
-chr21	38023059	chr21:38023059:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,5:21:40,0,195	0/0:22,0:22:0,64,255	0/1:4,3:8:30,0,58
-chr21	38026017	chr21:38026017:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:68,9,0	1/1:0,3:3:87,9,0	.
-chr21	38028769	chr21:38028769:M	AGGAGAAGGAGGAGGAGGAGGTGGTGGTGGAGGAGGAGGAGGAGGAGGA	<14.3>	.	.	Motif=AGG	GT:AD:DP:PL	0/0:5,0:6:0,6,124	0/0:2,0:2:0,6,58	0/1:6,9:16:199,0,123
-chr21	38034812	chr21:38034812:M	AAATAAATAAATAAATAAAT	<4>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:11,5:17:37,0,136	0/0:38,0:38:0,110,255	0/0:11,2:13:0,5,148
-chr21	38037800	chr21:38037800:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTG	<13>,<17>,<18>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,15,9,0:24:255,241,196,255,0,255,255,149,255,255	2/3:0,0,16,14:30:255,255,255,225,226,139,255,255,0,171	0/1:15,17,0,0:33:255,0,255,255,255,255,255,255,255,255
-chr21	38053207	chr21:38053207:M	CACACACACACACACACACACACACACACACAC	<14.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,7:16:255,183,161,212,0,210	0/2:15,0,7:25:130,188,255,0,255,255	0/1:9,15,0:25:255,0,178,255,226,255
-chr21	38074884	chr21:38074884:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:32:92,0,251	0/0:27,1:32:0,74,255	0/1:16,15:34:167,0,183
-chr21	38075752	chr21:38075752:M	AAAAAAAAAAAAAAAGAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:118,0,92	0/1:10,9:23:100,0,105	0/0:15,2:19:0,22,230
-chr21	38077058	chr21:38077058:M	ACACACACACACACACACACACACACACACACACTCACACACAC	<23>,<24>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/3:8,0,0,13:22:255,255,255,216,255,255,0,133,212,180	1/3:0,9,1,2:12:185,54,24,137,18,129,146,0,130,224	0/2:7,0,11,0:18:255,178,244,0,113,148,179,255,186,255
-chr21	38088584	chr21:38088584:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:37:255,0,188	0/1:12,17:31:219,0,128	0/0:28,1:30:0,70,255
-chr21	38091632	chr21:38091632:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,10:31:92,0,255	0/1:16,9:26:80,0,202	0/0:18,1:20:0,41,255
-chr21	38099746	chr21:38099746:M	TTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,17:24:245,0,39	0/1:7,11:22:153,0,67	0/0:18,3:23:0,14,255
-chr21	38100079	chr21:38100079:M	AAAAAAAAAGAAAAAGAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,11:27:130,0,215	0/1:13,12:25:142,0,160	0/0:39,0:39:0,115,255
-chr21	38103743	chr21:38103743:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,8:31:130,0,255	0/1:15,9:27:177,0,255	0/0:34,0:36:0,105,255
-chr21	38106141	chr21:38106141:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:90,17,0	1/1:0,4:4:58,11,0	1/1:1,8:9:104,11,0
-chr21	38108213	chr21:38108213:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,11:24:255,193,246,229,0,255	1/2:3,11,5:19:175,40,93,143,0,255	2/2:4,0,27:31:255,255,255,21,81,0
-chr21	38112872	chr21:38112872:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:127,0,108	0/1:6,8:15:96,0,71	0/0:28,2:30:0,52,255
-chr21	38115945	chr21:38115945:M	TACTACTACTA	<2.7>	.	.	Motif=TAC	GT:AD:DP:PL	0/1:24,7:31:46,0,255	0/1:22,8:30:60,0,255	0/0:43,0:43:0,127,255
-chr21	38116882	chr21:38116882:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,16:24:223,0,76	0/1:9,10:21:116,0,106	0/0:16,1:20:0,40,255
-chr21	38122819	chr21:38122819:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,19:34:255,0,255	0/1:14,17:33:255,0,255	0/0:43,0:45:0,134,255
-chr21	38124727	chr21:38124727:M	AAAAAAAAAAGGAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,20:37:255,0,212	0/1:17,21:38:255,0,191	0/0:37,0:37:0,109,255
-chr21	38126691	chr21:38126691:M	ACACACACACACACACACACACACAC	<16>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,13:28:255,0,255	0/1:20,10:30:246,0,255	0/0:32,0:33:0,99,255
-chr21	38133687	chr21:38133687:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:11,20:32:255,0,113	1/1:0,19:23:255,19,0	0/0:39,0:40:0,117,255
-chr21	38137397	chr21:38137397:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,13:22:255,0,106	0/1:12,7:22:132,0,255	0/0:26,1:31:0,56,255
-chr21	38147210	chr21:38147210:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20:36:255,0,176	0/1:8,16:25:204,0,76	0/0:24,0:24:0,71,255
-chr21	38149138	chr21:38149138:M	ACACACACACACGCACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:4,29:33:255,27,0	1/1:0,29:29:255,85,0
-chr21	38163737	chr21:38163737:M	CTTCTCCTTCTTCTTCATCTCTGTCTTTTTCTTCTCTTCTTC	<13>	.	.	Motif=CTT	GT:AD:DP:PL	0/1:10,8:18:57,0,82	0/1:8,7:15:50,0,61	0/0:28,0:28:0,78,255
-chr21	38172637	chr21:38172637:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:9:36,0,64	0/1:7,7:17:74,0,92	0/0:10,1:11:0,15,159
-chr21	38182537	chr21:38182537:M	GAGAGAGAGAGAGAGAGAGAGAAAAAGAGAGAGAGAAAAAAAAGAGAGAGAGAGAGA	<26.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:10,8:19:167,0,217	0/1:12,9:22:185,0,255	0/0:24,0:24:0,72,255
-chr21	38187742	chr21:38187742:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,35:60:255,0,255	0/1:19,23:42:255,0,216	0/0:59,0:59:0,174,255
-chr21	38193147	chr21:38193147:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,23,159	0/1:15,5:20:26,0,195	0/1:17,3:21:0,0,235
-chr21	38193799	chr21:38193799:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,2:26:0,30,255	0/0:14,2:17:0,16,210	0/1:9,4:14:29,0,122
-chr21	38202389	chr21:38202389:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,24:51:255,0,255	0/1:35,28:63:255,0,255	0/0:52,2:54:0,121,255
-chr21	38211838	chr21:38211838:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:38:189,0,255	0/0:39,1:41:0,102,255	0/0:41,0:43:0,126,255
-chr21	38232138	chr21:38232138:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,15:37:193,0,251	0/1:23,17:42:189,0,255	0/0:41,1:43:0,105,255
-chr21	38237950	chr21:38237950:M	AACAACAACAAGAACAACA	<8.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:20,18:38:255,0,255	0/1:21,19:40:255,0,255	0/0:29,0:29:0,87,255
-chr21	38241968	chr21:38241968:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:8:49,0,30	0/1:1,1:2:11,0,11	0/1:6,1:9:11,0,77
-chr21	38256361	chr21:38256361:M	TATATATATATATATATATAATAT	<14>,<18>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,25,3:29:255,81,6,255,0,255	1/1:0,12,0:14:255,36,0,255,24,255	2/2:0,0,5:7:167,167,167,18,18,0
-chr21	38268551	chr21:38268551:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<28>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,4:21:255,48,77,255,0,255	2/2:1,0,5:7:72,90,164,5,20,0	1/1:0,11,0:13:255,36,0,255,36,255
-chr21	38277028	chr21:38277028:M	TGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,42:42:255,126,0	1/1:0,44:44:255,132,0	1/1:0,31:33:255,96,0
-chr21	38304059	chr21:38304059:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,37:39:255,77,0	1/1:1,42:43:255,109,0	1/1:2,41:46:255,98,0
-chr21	38306372	chr21:38306372:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,111,0	1/1:0,36:38:255,111,0	1/1:0,38:39:255,114,0
-chr21	38316512	chr21:38316512:M	ATATATATATATATGAAATATATATATATTTCTATATATAT	<19.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,5:5:91,15,0	1/1:0,17:17:255,50,0
-chr21	38319388	chr21:38319388:M	ACACACACACA	<4.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:3:39,8,0	1/1:0,4:4:51,11,0	1/1:0,3:3:39,8,0
-chr21	38327939	chr21:38327939:M	AAAGAAAGAAAGAAAGAAAGAAAG	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:29,0:34:0,90,255	0/0:25,0:27:0,77,255	0/1:20,21:43:255,0,255
-chr21	38334621	chr21:38334621:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,20:33:255,0,124	0/1:13,12:26:134,0,162	0/0:20,3:25:0,16,255
-chr21	38354650	chr21:38354650:M	ACACACACACACACACACAC	<11>,<12>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,22,0:35:255,0,148,255,247,255	0/2:17,2,13:32:255,201,255,0,255,255	0/1:20,13,1:34:156,0,255,189,255,255
-chr21	38356732	chr21:38356732:M	CACACACACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,14:33:179,0,255	0/0:30,0:31:0,88,255	0/1:16,10:27:112,0,232
-chr21	38386790	chr21:38386790:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,4:54:212,0,255	0/1:22,20:44:253,0,255	0/1:20,2:56:255,0,215
-chr21	38391956	chr21:38391956:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,19:39:242,0,255	0/1:18,14:33:151,0,237	0/1:23,20:43:239,0,255
-chr21	38397597	chr21:38397597:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,1,1:4:12,3,23,3,0,22	1/2:0,3,1:4:53,16,15,48,0,72	2/2:0,0,3:3:50,58,84,9,9,0
-chr21	38402713	chr21:38402713:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:13:35,0,59	0/0:9,0:9:0,25,119	1/1:3,9:16:124,4,0
-chr21	38406155	chr21:38406155:M	AAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,4:7:147,19,0	1/1:0,5:7:174,21,0
-chr21	38407635	chr21:38407635:M	TATATATATATTTAATGTATATTATATGTATACTATATATCACCTATATATAATATAT	<32>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:11:255,32,0	1/1:0,2:3:68,9,0	1/1:0,6:7:193,21,0
-chr21	38418271	chr21:38418271:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,21,0:24:255,71,0,255,70,255	1/2:0,11,11:23:255,192,125,201,0,137	1/1:0,18,0:22:255,53,0,255,62,255
-chr21	38418928	chr21:38418928:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:7:81,12,0	1/1:0,0:1:2,1,0	1/1:0,4:8:139,19,0
-chr21	38419509	chr21:38419509:M	ATACACATACACACACACA	<3.5>	.	.	Motif=ATACAC	GT:AD:DP:PL	1/1:1,39:40:255,93,0	1/1:0,33:34:255,99,0	1/1:0,32:32:255,96,0
-chr21	38420032	chr21:38420032:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:39:0,116,255	0/1:16,10:27:188,0,255	0/0:39,0:43:0,122,255
-chr21	38420289	chr21:38420289:M	TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,28:30:255,69,0	0/1:11,19:31:255,0,107	0/1:12,15:27:199,0,144
-chr21	38423085	chr21:38423085:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:8,13:21:166,0,79	0/1:7,9:18:119,0,65	0/0:17,2:19:0,21,255
-chr21	38423982	chr21:38423982:M	AAAAGAAAAGAAAAGAAAAGAAA	<5.6>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:18,17:35:226,0,245	0/1:21,14:35:152,0,255	0/1:23,18:41:218,0,255
-chr21	38426770	chr21:38426770:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,239	0/0:26,0:26:0,76,255	0/1:14,20:35:255,0,167
-chr21	38426931	chr21:38426931:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,100,0	1/1:1,36:37:255,91,0	1/1:1,30:32:255,76,0
-chr21	38429348	chr21:38429348:M	ACATATACATATATAATATGTACACATATACATATA	<2.7>	.	.	Motif=ACATAT	GT:AD:DP:PL	0/1:23,6:37:205,0,255	0/1:13,2:16:52,0,255	0/1:15,12:32:255,0,255
-chr21	38429655	chr21:38429655:M	ATATATACATATATGTGTATATATGTATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,1:1:40,3,0	.	1/1:0,4:4:156,12,0
-chr21	38429747	chr21:38429747:M	ACACACACACACACACACCACA	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,41,1:44:255,126,0,255,111,255	1/2:0,21,15:39:255,238,127,255,0,175	1/1:1,38,0:42:255,95,0,255,94,255
-chr21	38430080	chr21:38430080:M	TATTTTTTTTTTATTTTTA	<3>	.	.	Motif=TATTTT	GT:AD:DP:PL	0/1:13,11:24:189,0,237	0/0:35,0:35:0,105,255	0/1:14,21:35:255,0,228
-chr21	38436013	chr21:38436013:M	TTTTTTTCTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:99,0,97	0/1:8,4:13:43,0,100	0/1:7,8:16:96,0,88
-chr21	38436881	chr21:38436881:M	TTTTTTTTTTCTTTCTCTCTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,16:23:226,0,52	0/0:14,1:15:0,27,227	0/1:9,10:19:124,0,106
-chr21	38440788	chr21:38440788:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	3/3:0,0,0,4:7:128,128,128,124,124,121,13,13,13,0	1/1:0,8,0,0:11:255,27,0,255,27,249,255,27,255,255	2/3:0,0,5,4:9:255,251,247,112,112,92,134,130,0,118
-chr21	38444727	chr21:38444727:M	AAAAAAAAAAAAAA	<12>,<13>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	3/4:0,0,0,12,8:21:255,255,255,255,255,255,154,155,155,97,188,221,220,0,161	1/3:1,10,0,5,1:18:255,79,128,255,147,255,255,0,179,255,255,78,251,255,255	2/4:0,1,13,0,12:26:255,255,255,255,255,255,255,255,215,255,240,214,0,255,255
-chr21	38445116	chr21:38445116:M	CTTTCTTTCTTTCTTTCTT	<3.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:19,0:21:0,31,255	0/0:28,0:28:0,82,255	0/1:11,8:23:120,0,141
-chr21	38446227	chr21:38446227:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:3,0:4:0,9,88	1/1:0,31:32:255,96,0
-chr21	38448003	chr21:38448003:M	AGTATTAGTATT	<1.8>	.	.	Motif=AGTATT	GT:AD:DP:PL	0/0:47,0:47:0,141,255	0/1:16,23:39:255,0,255	0/1:26,24:50:255,0,255
-chr21	38450206	chr21:38450206:M	AAAAAAAAAACAAAGAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:26:255,58,0	1/1:0,19:20:255,58,0	1/1:0,31:31:255,91,0
-chr21	38453883	chr21:38453883:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:255,33,0	0/1:4,3:9:56,0,95	0/1:12,5:18:83,0,255
-chr21	38455095	chr21:38455095:M	TTTCTTTCTTTCTTTCTTTCTTTCTTT	<6.2>,<6.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,22,0:29:181,58,0,129,38,94	1/2:0,9,14:25:86,39,16,35,0,1	1/2:0,13,11:28:107,34,4,52,0,16
-chr21	38455119	chr21:38455119:M	TTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,24:28:255,255,255,48,66,0	1/2:0,21,9:30:255,221,170,255,0,255	1/2:0,19,12:32:255,255,255,255,0,255
-chr21	38456587	chr21:38456587:M	ATCCCCATCCCCATC	<2.8>	.	.	Motif=ATCCCC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,34:34:255,102,0	1/1:0,45:45:255,135,0
-chr21	38457436	chr21:38457436:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,2,22:26:255,255,255,39,39,0	1/2:0,17,17:35:255,248,194,255,0,205	1/2:0,14,9:23:255,136,94,248,0,184
-chr21	38458424	chr21:38458424:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,9,157	0/1:2,3:5:67,0,39	0/1:4,4:10:87,0,90
-chr21	38466301	chr21:38466301:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,9:25:255,229,169,255,0,255	1/2:0,8,7:16:255,169,132,209,0,176	2/2:0,1,14:18:255,255,255,50,19,0
-chr21	38468983	chr21:38468983:M	AAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:16:255,47,0	1/1:0,16:19:255,54,0	1/1:0,16:16:255,48,0
-chr21	38470258	chr21:38470258:M	TATTATTATTATTATTATTATTATTGTTATAATTAT	<11>	.	.	Motif=TAT	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,19:19:255,56,0	1/1:0,33:33:255,97,0
-chr21	38473160	chr21:38473160:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,48,0	1/1:0,10:13:255,33,0	1/1:0,12:16:255,44,0
-chr21	38473795	chr21:38473795:M	TGTGTGTGTGTGTGTATGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,18:19:187,40,0	0/1:9,6:16:33,0,53	1/1:5,16:21:121,2,0
-chr21	38473836	chr21:38473836:M	ATGTGTATGTGTACATGTTTGCGTATGTATGCATGTGTATGTGTGAGCGTATGTGTGTGTAAGTGTTGTATATGTGTGTATGTGTGTGTATATGTATGTGT	<11.5>	.	.	Motif=ATGTGT	GT:AD:DP:PL	1/1:0,8:9:209,27,0	1/1:0,10:10:243,30,0	1/1:0,11:11:255,33,0
-chr21	38474732	chr21:38474732:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,36:40:255,114,0	1/1:0,39:40:255,117,0
-chr21	38476984	chr21:38476984:M	TTCTTTTTTCTTTTCTTTCTTTC	<6.2>	.	.	Motif=TTCT	GT:AD:DP:PL	1/1:0,11:11:228,33,0	1/1:0,11:12:227,33,0	1/1:0,23:23:255,68,0
-chr21	38485462	chr21:38485462:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:208,23,0	0/1:3,9:13:126,0,14	1/1:1,11:14:194,22,0
-chr21	38487121	chr21:38487121:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:30:255,53,0	1/1:1,16:17:255,32,0	1/1:0,20:22:255,64,0
-chr21	38491207	chr21:38491207:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,26:32:255,20,0	1/1:1,20:25:255,45,0	1/1:0,20:24:255,67,0
-chr21	38503369	chr21:38503369:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,37:42:255,67,0	1/1:2,33:37:255,72,0	1/1:1,38:40:255,99,0
-chr21	38507527	chr21:38507527:M	TGAATGAGTGAATGAATGAATGAATGAATGAATGAA	<10>,<11>	.	.	Motif=TGAA	GT:AD:DP:PL	1/2:0,9,8:17:255,153,106,149,0,125	1/2:0,9,15:24:255,255,203,139,0,94	1/2:0,14,12:26:255,223,151,225,0,189
-chr21	38507950	chr21:38507950:M	CACACACACGCACATGCACACACACAGAGACACACAGACACACACACATGCACACACACAGAGACACACAAACACACA	<8>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,3:3:84,9,0	1/1:0,4:6:112,12,0	0/1:4,1:7:11,0,99
-chr21	38513130	chr21:38513130:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:1,36:37:255,91,0	1/1:1,43:45:255,114,0
-chr21	38513139	chr21:38513139:M	AATAATAATAATA	<4.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:40,1:41:0,92,255	0/0:46,0:47:0,115,255	0/1:23,23:46:86,0,86
-chr21	38518237	chr21:38518237:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>,<12.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,7:19:255,113,77,224,0,172	2/2:1,0,18:19:255,255,255,38,56,0	0/1:7,12,0:19:255,0,147,218,126,255
-chr21	38520033	chr21:38520033:M	AACAAAAACAAAAA	<2.5>	.	.	Motif=AACAAA	GT:AD:DP:PL	1/1:0,29:30:255,89,0	0/1:25,17:43:243,0,255	1/1:0,49:50:255,148,0
-chr21	38537442	chr21:38537442:M	ATATATATATATATGTATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:48,0:49:0,144,255	0/0:31,0:31:0,93,255	0/1:26,22:49:255,0,255
-chr21	38539894	chr21:38539894:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,8,46	0/0:7,0:8:0,23,130	0/1:2,6:10:86,0,16
-chr21	38541913	chr21:38541913:M	AAATTAAATTAAATT	<4>	.	.	Motif=AAATT	GT:AD:DP:PL	0/1:17,10:27:114,0,250	0/0:43,0:43:0,127,255	0/1:20,19:39:243,0,255
-chr21	38543738	chr21:38543738:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:18:128,0,149	0/0:9,0:10:0,27,239	0/0:14,0:19:0,37,255
-chr21	38548451	chr21:38548451:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:20:89,0,163	0/1:17,5:22:23,0,232	0/0:35,1:39:0,95,255
-chr21	38548615	chr21:38548615:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:124,12,0	0/0:0,0:2:0,3,14	0/1:2,1:5:28,0,62
-chr21	38552847	chr21:38552847:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,1,3:21:43,46,255,0,250,255	0/0:36,1,0:38:0,94,255,111,255,255	1/2:1,14,8:24:255,131,83,189,0,188
-chr21	38555327	chr21:38555327:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,15:36:176,0,255	0/0:45,0:45:0,132,255	0/1:20,18:40:231,0,249
-chr21	38559384	chr21:38559384:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,0:5:5,0,22	1/1:0,0:3:5,2,0	0/1:5,4:10:35,0,63
-chr21	38572193	chr21:38572193:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:7:125,21,0	0/1:2,6:9:85,0,8	0/1:10,5:19:34,0,156
-chr21	38579826	chr21:38579826:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:22:38,0,234	0/0:19,0:20:0,58,255	0/1:11,6:18:57,0,158
-chr21	38586177	chr21:38586177:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<9.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,20:20:255,255,255,60,60,0	1/2:0,8,1:10:255,28,1,255,0,255	2/2:0,0,2:4:104,103,103,9,8,0
-chr21	38587361	chr21:38587361:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:28:175,0,175	0/1:4,14:18:191,0,17	1/1:2,16:18:252,17,0
-chr21	38592572	chr21:38592572:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>,<16>,<19>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,9,0,8:18:255,144,191,255,221,255,255,0,255,237	2/3:0,0,14,10:24:255,255,255,171,255,232,255,255,0,255	1/1:0,37,0,0:38:255,114,0,255,114,255,255,114,255,255
-chr21	38596057	chr21:38596057:M	GGGGGGGGGGGG	<10>,<11>	.	.	Motif=G	GT:AD:DP:PL	0/2:7,0,2:9:10,31,206,0,124,101	0/2:16,2,9:27:100,96,255,0,238,198	1/1:0,7,0:7:197,21,0,143,21,124
-chr21	38597473	chr21:38597473:M	ACACACACACACACACACACACACACACGCACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,21,4:26:255,97,30,255,0,255	1/1:0,28,0:29:255,83,0,255,84,255	2/2:0,0,24:26:255,255,255,78,72,0
-chr21	38610527	chr21:38610527:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:17,12:30:119,0,205	0/0:37,1:38:0,94,255
-chr21	38619327	chr21:38619327:M	TCCTCATCCTCCTCCTCTCTATTCCTCTTGCTCCCTCCCCTCATCCTCCTCCTC	<5.7>	.	.	Motif=TCC	GT:AD:DP:PL	0/1:12,11:23:208,0,222	0/1:11,8:19:140,0,211	0/1:21,13:34:218,0,255
-chr21	38627944	chr21:38627944:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,6:19:54,0,176	1/1:2,8:15:133,2,0	0/0:23,0:24:0,68,255
-chr21	38633879	chr21:38633879:M	AAAAAAAAAAAAA	<14>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,12,0,9:21:255,246,208,255,166,255,223,0,222,255	2/3:0,2,14,13:32:255,255,255,254,223,174,247,174,0,179	1/1:4,33,2,1:40:255,41,0,255,68,255,255,83,255,255
-chr21	38646280	chr21:38646280:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:44,0,62	0/1:6,4:12:44,0,70	0/0:12,0:14:0,40,224
-chr21	38660031	chr21:38660031:M	GGAAAGGAAAGG	<1.2>	.	.	Motif=GGAAA	GT:AD:DP:PL	0/0:23,0:23:0,69,255	0/0:50,0:50:0,150,255	0/1:13,12:25:255,0,255
-chr21	38662293	chr21:38662293:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,17:29:244,0,122	0/1:12,13:26:155,0,146	0/1:18,17:35:209,0,228
-chr21	38663352	chr21:38663352:M	GAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/0:34,0:34:0,102,255	0/1:19,10:30:184,0,255
-chr21	38671906	chr21:38671906:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/0:34,4:38:0,42,255	0/1:19,12:34:136,0,250
-chr21	38673768	chr21:38673768:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:9,12:21:169,0,112	0/1:7,20:27:255,0,48	0/1:9,17:26:242,0,93
-chr21	38675358	chr21:38675358:M	AAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:21,0,21	0/1:5,3:9:56,0,117	0/1:8,1:11:1,0,198
-chr21	38685288	chr21:38685288:M	AAATAAATAAATAAATAAATAAATAAATAAATAA	<9.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:18,0:18:0,53,255	0/1:13,10:23:120,0,177
-chr21	38692825	chr21:38692825:M	AAAAAAAAGAAAGGAAAAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,47,0	0/1:3,7:13:93,0,34	0/1:9,11:22:149,0,97
-chr21	38703696	chr21:38703696:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,10:30:107,0,227	0/1:7,5:15:44,0,107	0/1:16,6:24:40,0,228
-chr21	38707309	chr21:38707309:M	ATATATATATATATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13:16:255,41,0	1/1:0,6:7:175,21,0	1/1:0,10:10:255,30,0
-chr21	38707403	chr21:38707403:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,14:25:203,0,106	0/1:5,10:15:138,0,47	0/1:11,20:31:255,0,115
-chr21	38711058	chr21:38711058:M	AAAAAAAATAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:42:255,0,255	0/1:22,9:32:164,0,255	0/1:14,21:35:255,0,255
-chr21	38713078	chr21:38713078:M	GGGGGGAGGGGGGGGCGGGGGGGGGG	<27>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:50,9,0	0/1:1,1:2:10,0,10	1/1:0,2:3:33,6,0
-chr21	38718363	chr21:38718363:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:97,0,31	0/1:12,9:21:94,0,147	0/1:12,8:20:85,0,156
-chr21	38724538	chr21:38724538:M	GATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<11.5>,<14.5>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:15,5,0:25:63,0,234,116,152,255	0/1:10,8,0:22:123,0,139,172,103,255	1/2:1,10,9:24:235,76,176,195,0,238
-chr21	38724617	chr21:38724617:M	AGCTAGCTAGCTA	<4.2>	.	.	Motif=AGCT	GT:AD:DP:PL	0/1:18,24:42:255,0,255	0/1:17,10:27:200,0,255	0/1:21,32:53:255,0,255
-chr21	38726735	chr21:38726735:M	TTTCTTTTTCTTTTCTTT	<2.2>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:33,11:46:161,0,255	0/1:36,10:51:122,0,255	0/1:45,16:63:240,0,255
-chr21	38732116	chr21:38732116:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:2:0,6,28	0/1:2,3:5:34,0,18	0/1:1,1:2:11,0,11
-chr21	38733539	chr21:38733539:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<42>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/1:10,13:23:255,0,205	0/0:24,0:24:0,72,255
-chr21	38735929	chr21:38735929:M	AAAAAAAAAAGAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,97,0	1/1:1,27:28:255,65,0	0/1:25,22:47:255,0,255
-chr21	38737615	chr21:38737615:M	AAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAATAAAAAAAAAAAGAAAA	<56>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:173,21,0	1/1:0,3:3:82,9,0	0/1:5,5:14:104,0,124
-chr21	38757606	chr21:38757606:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:4,8:12:123,0,42	0/1:7,9:16:119,0,80	0/1:10,15:25:212,0,115
-chr21	38762099	chr21:38762099:M	TTTTTTTTTTTTTCTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:24:99,0,211	1/1:3,33:37:255,55,0	0/1:12,19:32:255,0,126
-chr21	38773030	chr21:38773030:M	AAGAAGAGAAGGCAAGAAGAAGAAGAAGAA	<9>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,26:26:255,77,0	0/1:13,18:31:236,0,144	1/1:0,38:38:255,112,0
-chr21	38781316	chr21:38781316:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,3:4:67,0,15
-chr21	38793516	chr21:38793516:M	TTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:27:255,69,0	0/1:13,16:34:255,0,255	1/1:1,17:23:255,38,0
-chr21	38799325	chr21:38799325:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:49:255,145,0	0/1:23,20:43:232,0,255	1/1:0,54:54:255,159,0
-chr21	38799673	chr21:38799673:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,32:35:255,65,0	0/1:17,12:31:125,0,235	1/1:1,25:26:255,58,0
-chr21	38807418	chr21:38807418:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,7:12:209,102,86,41,0,46	0/1:6,2,1:11:17,0,74,11,82,157	1/2:1,2,3:8:100,49,49,12,0,23
-chr21	38808580	chr21:38808580:M	GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGTGTGTGT	<27.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,5:5:135,15,0	0/1:6,7:15:148,0,129	1/1:0,16:16:255,48,0
-chr21	38812782	chr21:38812782:M	AATAATAATAATAATAAT	<5>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,25:25:255,74,0	0/1:22,16:38:178,0,255	1/1:0,31:31:255,92,0
-chr21	38815171	chr21:38815171:M	TGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,27,0:29:255,66,0,255,84,255	0/1:22,12,0:38:115,0,255,213,255,255	1/2:0,11,15:26:255,255,255,199,0,240
-chr21	38834774	chr21:38834774:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/0:22,0:23:0,67,255	0/1:21,27:49:255,0,241
-chr21	38836215	chr21:38836215:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:25:0,74,255	0/1:20,17:37:255,0,255	0/0:31,0:31:0,93,255
-chr21	38836788	chr21:38836788:M	AAGAAGAAGAAGA	<3.7>	.	.	Motif=AAG	GT:AD:DP:PL	0/0:13,0:13:0,39,255	0/1:8,3:11:49,0,191	0/0:21,0:21:0,63,255
-chr21	38837711	chr21:38837711:M	ACACACATACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:12,4:16:23,0,163	0/1:8,10:18:115,0,81	0/0:23,1:24:0,53,255
-chr21	38848893	chr21:38848893:M	TTTTTTCTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41:42:255,105,0	0/1:16,18:34:214,0,181	1/1:4,28:33:255,25,0
-chr21	38854557	chr21:38854557:M	AGAAAAGAACAGAAAA	<3.4>	.	.	Motif=AGAAA	GT:AD:DP:PL	1/1:0,46:46:255,138,0	0/1:19,17:36:255,0,255	1/1:0,48:48:255,144,0
-chr21	38866716	chr21:38866716:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:12:54,0,90	0/1:2,4:6:51,0,17	0/0:20,0:21:0,61,255
-chr21	38867617	chr21:38867617:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<12>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,7,10:17:255,165,144,133,0,86	1/2:0,6,8:14:255,123,105,108,0,68	2/2:0,0,15:15:255,255,255,44,44,0
-chr21	38870270	chr21:38870270:M	TGTGTGTGCGTGCATGTGTGTGTGTGTTTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,0:29:0,85,255	0/0:25,0:25:0,74,255	0/1:13,14:27:182,0,163
-chr21	38874621	chr21:38874621:M	AAAAAAAAAATAAAAAATAAAAAATAAAATAAAATAAAA	<40>,<50>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,6:18:255,153,117,225,0,255	1/1:2,12,0:14:180,6,0,219,41,255	1/2:0,15,5:20:255,124,80,255,0,255
-chr21	38878438	chr21:38878438:M	AAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:28,2,23:55:255,255,255,0,255,255	2/2:0,1,30:34:255,255,255,90,70,0	0/1:17,29,0:46:255,0,176,255,255,255
-chr21	38886454	chr21:38886454:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,3:37:0,52,255	0/0:38,3:42:0,70,255	0/1:19,17:38:211,0,246
-chr21	38904148	chr21:38904148:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,12,0:29:255,180,255,226,0,255,255,255,255,255	1/1:0,23,0,0:25:255,73,0,255,75,255,255,75,255,255	2/3:0,0,11,6:17:255,255,255,164,164,131,190,255,0,255
-chr21	38905111	chr21:38905111:M	TAGATAGAAAGATAGATAGATAGATAGATAGACAGATAGATAGATAGAT	<33.8>	.	.	Motif=TAGA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:21,0:21:0,63,255	0/1:20,7:27:6,0,255
-chr21	38908412	chr21:38908412:M	TTCCCATTCCCAT	<1.7>	.	.	Motif=TTCCCA	GT:AD:DP:PL	0/0:35,1:36:0,81,255	0/1:18,6:24:89,0,255	0/0:38,0:38:0,114,255
-chr21	38911271	chr21:38911271:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:28,0:28:0,82,255	0/1:10,16:26:222,0,110
-chr21	38915411	chr21:38915411:M	ATATATATATATATATATATATA	<9.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,28,6:37:255,92,0,255,32,255	1/1:0,19,6:28:255,66,0,249,9,175	1/2:0,20,30:50:255,255,198,221,0,87
-chr21	38916606	chr21:38916606:M	TTTGTTTGTTTGTTT	<2.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:29,0:29:0,85,255	0/1:31,16:47:163,0,255
-chr21	38917678	chr21:38917678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:25:255,54,0	1/1:1,23:24:255,53,0	1/1:1,36:37:255,91,0
-chr21	38920349	chr21:38920349:M	TTTTTTTTTCTTTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:18:255,54,0	1/1:0,18:19:255,57,0	1/1:0,2:4:76,11,0
-chr21	38924493	chr21:38924493:M	AAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:6:128,17,0	1/1:0,5:6:148,18,0	1/1:0,8:8:219,24,0
-chr21	38931367	chr21:38931367:M	AACAACAACAA	<4.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,32:33:255,89,0	1/1:0,33:34:255,102,0
-chr21	38934489	chr21:38934489:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,17:20:255,3,0	0/1:4,16:21:227,0,9	1/1:1,16:17:255,32,0
-chr21	38963875	chr21:38963875:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<25>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,1,1:2:38,38,38,12,12,9,27,27,0,24	2/3:0,0,4,3:7:142,142,142,35,35,23,106,106,0,98	1/1:0,5,0,0:5:146,15,0,146,15,146,146,15,146,146
-chr21	38965049	chr21:38965049:M	AAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,1,1	0/0:0,0:1:0,0,0	1/1:0,7:11:229,16,0
-chr21	38966587	chr21:38966587:M	CCCCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,19:23:255,66,0	1/1:0,11:11:255,33,0	1/1:0,7:7:181,21,0
-chr21	38967399	chr21:38967399:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:3:2,1,0	1/1:0,0:2:2,1,0	1/1:0,7:9:229,24,0
-chr21	38973998	chr21:38973998:M	CTCTCTCTCTCTCTTTCTCTCTCTCTCTCT	<16>	.	.	Motif=CT	GT:AD:DP:PL	0/0:24,0:25:0,74,255	0/0:26,0:28:0,82,255	0/1:16,11:29:126,0,219
-chr21	38982396	chr21:38982396:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,25:37:255,0,75	0/1:12,17:30:211,0,117	0/1:16,13:32:154,0,198
-chr21	38986349	chr21:38986349:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:20:0,56,255	0/1:4,7:12:161,0,75	0/0:16,0:19:0,54,255
-chr21	38994771	chr21:38994771:M	TCTCTGTCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTGTGTGTCTCTCTGTCTCCCCTCTCCCTCTCTCTCTCTGTCTCTC	<10>,<30.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,3,1:6:188,40,31,148,0,142	0/0:1,0,0:1:0,3,28,3,28,28	1/2:0,6,8:14:255,200,182,255,0,255
-chr21	38997796	chr21:38997796:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,23,14:39:255,255,161,255,0,255	2/2:1,2,22:27:255,255,255,46,33,0	1/1:3,40,5:49:255,86,0,255,51,255
-chr21	39001725	chr21:39001725:M	TAAAAAAAAAAAAAAAAATACATAAAATAAAATAAAA	<7.6>,<7.8>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:4,4,2:11:65,0,48,21,32,115	1/2:1,6,3:10:157,38,29,80,0,95	0/0:13,0,0:15:0,43,255,44,255,255
-chr21	39015385	chr21:39015385:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:18:101,0,103	1/1:0,12:13:213,37,0	0/1:14,11:26:118,0,182
-chr21	39016706	chr21:39016706:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,19:20:255,57,0	1/1:0,21:23:255,66,0
-chr21	39019459	chr21:39019459:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,25:26:255,58,0	1/1:0,31:32:255,94,0	1/1:2,38:40:255,81,0
-chr21	39034634	chr21:39034634:M	AAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:57,6,0	0/1:1,4:6:91,0,13	1/1:0,3:3:85,9,0
-chr21	39045357	chr21:39045357:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:19:0,56,255	0/0:16,1:19:0,38,255	0/1:7,6:15:72,0,88
-chr21	39047035	chr21:39047035:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,20,0,0:32:255,0,87,255,153,255,255,180,255,255	1/2:1,14,11,0:27:255,171,243,229,0,255,255,189,255,255	0/3:10,2,3,7:23:161,173,255,87,200,224,0,147,149,255
-chr21	39049544	chr21:39049544:M	ACACACACACACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:24,0:27:0,80,255	0/1:15,3:23:50,0,255	0/1:17,9:28:180,0,255
-chr21	39052506	chr21:39052506:M	ACACATACACATATACACACACATACATACACACACA	<14.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,17:27:255,255,255,255,0,205	1/2:0,3,7:11:249,175,170,77,0,56	2/2:0,0,21:22:255,255,255,63,63,0
-chr21	39058140	chr21:39058140:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:25:113,0,187	1/1:1,21:23:255,50,0	0/1:18,8:29:64,0,254
-chr21	39060531	chr21:39060531:M	ACACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,12:33:225,0,255	1/1:0,26:27:255,78,0	0/1:21,5:28:54,0,255
-chr21	39060676	chr21:39060676:M	ACACACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,12:28:255,0,255	1/1:0,27:28:255,81,0	0/1:22,22:44:255,0,255
-chr21	39064037	chr21:39064037:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:255,0,255	1/1:0,30:36:255,95,0	0/1:7,10:18:221,0,137
-chr21	39064072	chr21:39064072:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:18,12:30:142,0,255	1/1:0,23:23:255,68,0	0/1:18,20:38:255,0,221
-chr21	39070888	chr21:39070888:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:2,48:50:255,109,0	1/1:0,35:35:255,103,0	1/1:0,41:41:255,121,0
-chr21	39081684	chr21:39081684:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:15:170,0,10	0/1:2,8:11:114,0,2	1/1:0,18:19:255,55,0
-chr21	39084771	chr21:39084771:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,4:8:154,59,47,68,0,47	0/2:2,0,1:3:8,14,64,0,33,25	0/2:1,0,4:5:54,57,83,0,17,3
-chr21	39086583	chr21:39086583:M	AAAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,99,0	0/1:5,19:25:255,0,73	0/1:9,18:29:255,0,173
-chr21	39092788	chr21:39092788:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,8:14:177,127,221,73,0,117	0/2:13,3,8:24:67,86,255,0,132,198	0/1:7,9,0:17:124,0,72,172,102,255
-chr21	39095165	chr21:39095165:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:123,0,115	0/1:6,4:13:49,0,76	0/0:17,1:21:0,43,255
-chr21	39102175	chr21:39102175:M	ACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,1,5,5:11:255,205,188,131,116,113,126,68,0,120	1/3:0,5,0,4:11:172,105,99,162,103,168,72,0,81,126	1/2:0,4,5,0:9:188,85,59,57,0,42,200,85,68,240
-chr21	39105744	chr21:39105744:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23:39:255,0,184	0/1:15,14:31:177,0,175	0/0:42,1:45:0,113,255
-chr21	39112639	chr21:39112639:M	AAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,7,0:25:62,0,234,125,255,255	0/1:19,10,0:31:81,0,255,170,255,255	1/2:2,11,16:31:255,255,255,159,0,236
-chr21	39119685	chr21:39119685:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:6:36,0,36	0/1:3,1:4:5,0,39	0/1:10,4:14:29,0,135
-chr21	39125067	chr21:39125067:M	GTGTGTGTGTGTGTGTGTGTGT	<14>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,16:31:255,255,255,255,0,255	1/2:0,15,16:32:255,255,255,255,0,255	1/2:0,18,12:33:255,255,255,255,0,255
-chr21	39125915	chr21:39125915:M	ACACACCAGACACACACACCACACTGACACACACACACACACACACACA	<21.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,7,7:14:255,133,195,211,0,190	1/2:1,4,7:12:206,108,214,103,0,98	1/2:2,8,5:16:255,57,133,203,0,219
-chr21	39127478	chr21:39127478:M	TTTTTTTTTTGTTTTGTTTTGTTTTTTTT	<30>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,13:21:255,255,255,71,0,131	1/2:0,7,8:17:255,200,188,109,0,155	0/2:10,0,5:18:104,139,255,0,191,255
-chr21	39132692	chr21:39132692:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:5:69,43,40,17,0,6	1/2:0,4,3:7:142,41,29,65,0,46	0/0:1,0,0:1:0,3,29,3,20,17
-chr21	39136482	chr21:39136482:M	ATATATATATATATATATATATAT	<10>,<11>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,13:29:255,208,160,255,0,212	1/2:2,19,11:33:255,131,122,255,0,255	0/1:13,18,1:33:255,0,255,255,227,255
-chr21	39139981	chr21:39139981:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:31:255,72,0	1/1:0,20:20:255,59,0	0/1:10,18:32:252,0,98
-chr21	39143087	chr21:39143087:M	CTTCCCCTTCACCTTC	<2.8>	.	.	Motif=CTTCAC	GT:AD:DP:PL	0/1:18,18:36:255,0,255	0/1:11,13:24:250,0,200	0/1:19,25:44:255,0,255
-chr21	39149578	chr21:39149578:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,16,20:37:255,255,255,255,0,194	1/2:1,19,14:34:255,194,162,255,0,240	2/2:2,0,26:29:255,255,255,38,82,0
-chr21	39158201	chr21:39158201:M	AAAAAAAAAAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:30:0,88,255	0/0:29,1:33:0,78,255	0/1:18,9:28:84,0,252
-chr21	39158396	chr21:39158396:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:49,3,0	0/1:3,6:11:77,0,18	1/1:0,1:1:16,3,0
-chr21	39158840	chr21:39158840:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:9,0,19	0/1:1,2:3:24,0,8	0/1:8,3:11:19,0,104
-chr21	39166413	chr21:39166413:M	TTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:14:255,32,0	1/1:0,4:9:154,17,0	0/0:0,0:3:0,1,3
-chr21	39185296	chr21:39185296:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:137,0,16	1/1:0,2:3:71,9,0	1/1:0,1:3:56,9,0
-chr21	39185709	chr21:39185709:M	AAAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,24:37:255,255,255,0,255,255	0/2:20,1,24:46:255,255,255,0,255,255	1/2:0,23,26:49:255,255,255,255,0,255
-chr21	39195743	chr21:39195743:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:40:255,0,224	0/1:18,21:42:255,0,209	0/1:17,21:41:255,0,193
-chr21	39207452	chr21:39207452:M	ACACACACACACACACACACACACACACACACA	<20.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:14,0,3:20:31,74,255,0,255,255	0/2:6,0,10:16:231,236,255,0,155,125	1/1:0,8,0:10:237,27,0,219,18,209
-chr21	39208979	chr21:39208979:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:38:0,83,255	0/0:27,1:31:0,70,255	0/1:22,9:36:80,0,255
-chr21	39214870	chr21:39214870:M	TTTTTTTTTCCTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:99,0,99	0/1:13,14:28:163,0,146	1/1:1,16:18:255,35,0
-chr21	39217011	chr21:39217011:M	ATATATATATATATATATATATATAAATATATATATATATTTATATATATATATATATATATATATATATATAT	<15.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,0:5:20,20,19,5,5,0	2/2:0,0,0:1:0,0,0,0,0,0	1/2:0,6,12:20:255,255,206,122,0,67
-chr21	39217084	chr21:39217084:M	TTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,7,58	0/0:0,0:1:0,2,4	1/1:0,12:14:255,39,0
-chr21	39221155	chr21:39221155:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,16,164	0/0:8,1:14:0,20,160	0/1:7,4:13:42,0,96
-chr21	39238286	chr21:39238286:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:17:76,0,111	0/1:12,12:29:160,0,120	1/1:2,16:22:255,26,0
-chr21	39240901	chr21:39240901:M	TTTTTTTTTTTGTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:28:0,82,255	0/0:33,1:34:0,82,255	0/1:13,8:22:85,0,177
-chr21	39244922	chr21:39244922:M	ATATATATATATATATATATATAT	<9>,<14>	.	.	Motif=AT	GT:AD:DP:PL	0/2:14,0,14:31:255,255,255,0,255,255	0/0:9,0,0:11:0,30,255,30,255,255	1/2:0,13,4:18:255,105,66,255,0,255
-chr21	39245590	chr21:39245590:M	TTTTTTTTTTGGTTTTTTTTTTTTTTT	<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,4,11:23:174,96,255,0,61,70	0/2:19,1,12:32:124,156,255,0,255,233	1/2:0,10,11:21:255,163,133,174,0,115
-chr21	39248642	chr21:39248642:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>,<26>,<34>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6,0:10:245,155,143,90,0,72,245,155,90,245	1/2:0,1,2,0:6:102,64,59,37,0,28,102,64,37,102	2/3:0,0,3,3:8:173,173,173,87,87,76,86,86,0,74
-chr21	39249916	chr21:39249916:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>,<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,17,0,0:31:255,0,255,255,255,255,255,225,255,255	0/2:9,0,22,1:36:255,255,255,0,255,216,255,255,129,255	1/3:0,9,1,9:22:255,162,223,255,238,255,255,0,148,248
-chr21	39252250	chr21:39252250:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:10:0,2,197	0/1:13,3:16:31,0,255	0/1:8,4:13:70,0,182
-chr21	39257203	chr21:39257203:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:26:0,50,255	0/0:21,3:26:0,21,255	0/1:12,14:28:176,0,140
-chr21	39264429	chr21:39264429:M	AAAAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:16,0,9:26:95,158,255,0,255,210	0/2:16,0,6:24:54,101,255,0,255,202	1/2:0,18,12:36:255,211,241,255,0,255
-chr21	39268443	chr21:39268443:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8:15:109,0,55	0/1:7,16:24:211,0,48	0/1:7,14:24:204,0,53
-chr21	39272009	chr21:39272009:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7,0:20:69,0,180,108,235,255	0/1:8,5,0:15:43,0,115,73,151,255	1/2:3,6,4:14:116,9,34,29,0,102
-chr21	39272310	chr21:39272310:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,12:18:140,0,44	0/1:12,10:22:91,0,121	1/1:0,13:14:194,29,0
-chr21	39274298	chr21:39274298:M	AGAGAGCGAGAGAGAGAGAGAGAGAGAGA	<13.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:26,2:28:0,45,255	0/0:30,3:33:0,44,255	0/1:20,13:34:138,0,255
-chr21	39279639	chr21:39279639:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAA	<27>,<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0,0:7:0,21,178,20,130,114	0/2:6,0,3:9:23,49,224,0,98,73	0/1:1,6,1:9:145,0,15,134,0,145
-chr21	39286017	chr21:39286017:M	TTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:12:0,33,255	0/0:13,0:19:0,53,255	1/1:0,5:6:140,15,0
-chr21	39290491	chr21:39290491:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:13:0,20,186	0/1:12,7:19:63,0,149	0/1:10,2:13:6,0,138
-chr21	39292114	chr21:39292114:M	GTGGGGGGTGGGTGGG	<1.5>	.	.	Motif=GTGG	GT:AD:DP:PL	0/1:2,1:3:17,0,44	0/1:1,3:4:67,0,15	1/1:0,1:1:28,3,0
-chr21	39294655	chr21:39294655:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,1:16:0,29,241	0/0:16,1:19:0,36,255	0/1:13,7:20:63,0,169
-chr21	39299248	chr21:39299248:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,17:37:167,0,213	0/1:16,16:32:157,0,155	1/1:4,39:44:255,49,0
-chr21	39299260	chr21:39299260:M	ATATATATATAT	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:21,7:31:0,12,55	0/0:22,10:32:0,9,50	1/1:0,25:30:129,49,0
-chr21	39299813	chr21:39299813:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,21:38:255,0,203	0/1:20,14:34:146,0,250	1/1:0,31:33:255,96,0
-chr21	39301894	chr21:39301894:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,3:35:0,47,255	0/0:27,0:30:0,84,255	0/1:25,17:42:182,0,255
-chr21	39302755	chr21:39302755:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:11:89,0,25	0/1:4,10:18:150,0,27	1/1:2,8:13:139,2,0
-chr21	39303520	chr21:39303520:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7:8:103,6,0	0/1:7,2:10:8,0,88	0/1:2,2:7:19,0,32
-chr21	39303823	chr21:39303823:M	AAAAAAAAAAAGAAAAAGAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:33,0:34:0,99,255	0/1:8,10:18:129,0,93
-chr21	39304142	chr21:39304142:M	AAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:18:255,0,50	0/1:2,11:15:254,0,21	1/1:0,17:21:255,56,0
-chr21	39304958	chr21:39304958:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:70,0,16	0/0:3,0:5:0,9,83	0/1:2,1:3:18,0,48
-chr21	39305861	chr21:39305861:M	AAAAAGAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,124	0/1:10,6:16:54,0,123	1/1:2,11:14:164,6,0
-chr21	39308482	chr21:39308482:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,5:9:62,74,177,0,70,45	0/2:3,1,2:7:25,12,89,0,39,39	1/2:0,10,3:14:255,44,11,178,0,143
-chr21	39309289	chr21:39309289:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,14:23:195,0,102	0/1:13,13:26:154,0,155	0/1:12,14:26:181,0,144
-chr21	39309825	chr21:39309825:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:58,0,58	0/1:1,2:4:34,0,5	0/1:6,3:13:25,0,97
-chr21	39310604	chr21:39310604:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,17:48:114,0,255	0/1:18,13:33:95,0,166	0/1:24,24:50:209,0,205
-chr21	39310614	chr21:39310614:M	ATTATTATTATT	<3.7>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:31,3:35:0,59,255	0/0:22,3:25:0,32,232	1/1:0,5:6:57,11,0
-chr21	39313590	chr21:39313590:M	CGCCGCCGCCGCCGCCGCCGCCGCC	<7.3>,<9.3>	.	.	Motif=CGC	GT:AD:DP:PL	0/2:10,0,12:22:163,223,255,0,161,125	0/2:7,0,11:18:144,193,255,0,106,73	1/2:0,8,6:14:217,106,120,144,0,184
-chr21	39315748	chr21:39315748:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:20:109,0,147	0/1:16,18:34:219,0,183	1/1:0,45:46:255,135,0
-chr21	39320668	chr21:39320668:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:11:49,0,75	0/1:5,2:8:20,0,62	0/1:2,5:8:74,0,12
-chr21	39321449	chr21:39321449:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,8:25:87,0,208	0/1:15,6:24:47,0,213	1/1:2,20:23:255,31,0
-chr21	39325277	chr21:39325277:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:10:131,11,0	0/1:2,7:9:91,0,7	1/1:3,20:26:255,23,0
-chr21	39327502	chr21:39327502:M	TTTTTTTTGTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:29:255,0,224	0/1:23,18:42:255,0,255	1/1:0,49:51:255,152,0
-chr21	39327906	chr21:39327906:M	AATAAATAAATAAATAAATGAATAAATAAATAAATAAATAAAATTAAATAAA	<12>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:7,1:8:0,4,115	0/0:8,0:8:0,24,145	1/1:0,18:18:255,53,0
-chr21	39328192	chr21:39328192:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,13:29:159,0,216	0/1:8,13:21:170,0,81	1/1:0,35:36:255,106,0
-chr21	39329517	chr21:39329517:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:12:71,0,70	0/1:9,6:17:71,0,102	1/1:1,12:14:199,23,0
-chr21	39329854	chr21:39329854:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:16:138,0,64	0/1:13,6:19:49,0,172	1/1:0,16:17:255,50,0
-chr21	39330931	chr21:39330931:M	AATAATAATAATAATA	<6.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:21,11:32:207,0,255	0/1:10,10:22:212,0,206	1/1:0,43:46:255,134,0
-chr21	39331427	chr21:39331427:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:11:23,0,69	0/1:6,3:10:20,0,66	1/1:0,5:5:78,14,0
-chr21	39333390	chr21:39333390:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:16:64,0,133	0/0:10,2:13:0,3,154	1/1:2,13:16:215,12,0
-chr21	39337021	chr21:39337021:M	TTTTTTCTTTTCTTTTCTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,15:41:145,0,255	0/1:11,10:23:111,0,129	1/1:1,19:21:255,44,0
-chr21	39344257	chr21:39344257:M	AAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:18:255,15,0	1/1:0,7:10:203,20,0	1/1:0,32:34:255,101,0
-chr21	39345110	chr21:39345110:M	CACACACACACACACACACACACACACAC	<12.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,15:30:255,0,255	0/1:14,7:21:127,0,255	1/1:0,29:31:255,92,0
-chr21	39356284	chr21:39356284:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:24:147,0,148	0/1:17,7:24:50,0,223	0/0:15,3:21:0,7,242
-chr21	39370422	chr21:39370422:M	ACACACACACACACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:8,7:17:120,0,144	0/1:17,6:25:71,0,255	0/1:21,12:37:181,0,255
-chr21	39371147	chr21:39371147:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:16:79,0,116	0/1:15,6:22:49,0,193	1/1:3,25:31:255,33,0
-chr21	39374892	chr21:39374892:M	TCCCCTCCCCTCCACTTCTGTCCCCTCCCCTGCCCTCCACTTCCCTTTCCCCTCCCC	<11.6>	.	.	Motif=TCCCC	GT:AD:DP:PL	0/0:9,1:10:0,12,33	0/0:8,1:10:0,8,25	0/1:5,4:10:2,0,6
-chr21	39376103	chr21:39376103:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:40,0,5	.	0/0:1,0:1:0,3,17
-chr21	39384565	chr21:39384565:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,24:28:255,24,0	1/1:1,16:18:255,35,0	1/1:0,22:23:255,67,0
-chr21	39386850	chr21:39386850:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,61,0	1/1:0,34:36:255,97,0	1/1:2,26:29:255,49,0
-chr21	39395369	chr21:39395369:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,110,0	1/1:0,34:35:255,103,0	1/1:0,32:35:255,102,0
-chr21	39396686	chr21:39396686:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:179,29,0	1/1:2,11:15:173,9,0	1/1:0,3:4:63,11,0
-chr21	39403616	chr21:39403616:M	TATTTTTATTTTTATTTTTTTTTT	<3.8>	.	.	Motif=TATTTT	GT:AD:DP:PL	1/1:0,23:23:255,69,0	1/1:0,24:25:255,73,0	1/1:0,26:26:255,78,0
-chr21	39404751	chr21:39404751:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:86,15,0	1/1:1,4:6:58,1,0	1/1:0,2:2:34,6,0
-chr21	39414707	chr21:39414707:M	TCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,15:20:245,54,0	0/1:7,8:19:84,0,49	1/1:0,18:21:255,57,0
-chr21	39414743	chr21:39414743:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<24>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,10,6:17:255,72,22,125,0,78	1/2:0,7,5:13:255,59,21,88,0,53	1/2:0,4,10:15:255,116,72,57,0,15
-chr21	39419524	chr21:39419524:M	AAAAAAAAAAAAGAAAAAAGAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,17:24:214,0,4	1/1:0,22:22:255,64,0	1/1:1,28:31:255,68,0
-chr21	39428579	chr21:39428579:M	TATATATATATATATATATAT	<8>,<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,2:6:70,20,38,48,0,39	1/2:0,3,5:8:119,50,98,70,0,51	0/0:0,0,0:3:0,0,0,0,0,0
-chr21	39433928	chr21:39433928:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:9:116,8,0	0/1:1,2:4:32,0,5	0/1:2,6:9:78,0,19
-chr21	39446168	chr21:39446168:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:36:255,106,0	1/1:0,42:45:255,134,0	1/1:0,33:35:255,104,0
-chr21	39447417	chr21:39447417:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:15:40,0,84	0/0:4,0:6:0,12,60	0/0:4,0:6:0,14,76
-chr21	39473885	chr21:39473885:M	AAAAAAAAAAACAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:28:255,81,0	1/1:0,22:23:255,68,0	1/1:2,30:33:255,44,0
-chr21	39474891	chr21:39474891:M	GTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:2,40:42:255,86,0	1/1:0,33:33:255,97,0	1/1:2,31:33:255,60,0
-chr21	39485682	chr21:39485682:M	TTTTCTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:11:188,32,0	0/1:3,7:11:95,0,19	1/1:0,13:13:227,38,0
-chr21	39490740	chr21:39490740:M	TTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:36:255,104,0	1/1:0,40:44:255,130,0	1/1:0,45:45:255,135,0
-chr21	39491159	chr21:39491159:M	TTTATTTATTTATTTATTTATTTTATTTTTTATTT	<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,26:42:117,4,0	0/1:0,17:32:64,0,18	1/1:0,30:44:161,23,0
-chr21	39492467	chr21:39492467:M	TATATATATATATATA	<4>,<7>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,3:5:73,34,64,47,0,38	1/2:0,3,9:12:146,99,203,69,0,44	1/2:0,6,3:9:168,33,54,141,0,131
-chr21	39492482	chr21:39492482:M	ACACACACACACACACACCACA	<10>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,28:30:255,83,0	1/1:1,27:32:255,76,0	1/1:0,37:38:255,105,0
-chr21	39494223	chr21:39494223:M	TCTTCTTCCTCTTCTTCTTCTTCTTCTTCTT	<8.3>,<9.3>	.	.	Motif=TCT	GT:AD:DP:PL	2/2:0,1,39:44:255,255,255,119,63,0	2/2:0,1,29:34:255,255,255,91,36,0	1/2:0,19,21:49:255,209,129,255,0,176
-chr21	39494252	chr21:39494252:M	TTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:42:255,114,0	1/1:0,28:32:255,84,0	1/1:0,35:41:255,105,0
-chr21	39496507	chr21:39496507:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:11:239,27,0	1/1:0,4:7:163,21,0	1/1:0,6:8:193,21,0
-chr21	39499247	chr21:39499247:M	CTATCTATCATCTGTCTATCTGTCTATCTATCTAT	<11.8>,<14.8>	.	.	Motif=CTAT	GT:AD:DP:PL	1/2:0,11,14:28:255,255,255,255,0,226	2/2:0,0,15:18:255,255,255,48,35,0	1/2:0,15,8:24:255,198,154,255,0,255
-chr21	39502986	chr21:39502986:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:30:255,78,0	1/1:0,29:29:255,85,0	1/1:1,29:31:255,64,0
-chr21	39509472	chr21:39509472:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:14:255,39,0	1/1:0,7:9:255,27,0	1/1:0,9:11:255,30,0
-chr21	39515693	chr21:39515693:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,51:51:255,150,0	1/1:1,56:57:255,150,0
-chr21	39532565	chr21:39532565:M	AAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:231,6,0	1/1:1,11:13:255,13,0	1/1:0,15:16:255,45,0
-chr21	39533114	chr21:39533114:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:27:106,0,218	0/1:11,10:23:111,0,138	1/1:1,24:25:255,55,0
-chr21	39533987	chr21:39533987:M	ATTTTTTATTTTTTATTTTATTTATTTTAATTTTATTTATTT	<11.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,5:16:42,0,99	0/1:5,3:8:19,0,47	1/1:0,8:9:115,23,0
-chr21	39537149	chr21:39537149:M	GAGAGAGAGAGAGAGAGAGA	<12>	.	.	Motif=GA	GT:AD:DP:PL	0/1:21,21:44:255,0,255	0/1:22,13:36:247,0,255	1/1:0,34:34:255,102,0
-chr21	39541684	chr21:39541684:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,16:28:223,0,147	0/1:19,22:41:255,0,222	1/1:0,50:50:255,148,0
-chr21	39541723	chr21:39541723:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:25:181,0,130	0/1:11,10:23:127,0,135	1/1:4,29:34:255,28,0
-chr21	39541891	chr21:39541891:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:25:181,0,255	0/1:11,2:15:15,0,255	1/1:1,18:19:255,29,0
-chr21	39549254	chr21:39549254:M	AAAAAAAAAAAATAATAAAACAAGAAAACAAACAAACAAAAAAA	<48>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,9:20:180,0,196	0/1:15,6:22:95,0,255	1/1:0,15:16:255,47,0
-chr21	39550241	chr21:39550241:M	TTTTTTTTTAATTTTATTTTA	<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:15,15:31:255,0,255	0/1:9,14:23:255,0,176	1/1:0,34:35:255,104,0
-chr21	39554938	chr21:39554938:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:3:81,9,0,67,9,60	1/1:0,1,0:1:28,3,0,22,3,20	1/2:0,1,5:6:142,95,82,20,0,3
-chr21	39554968	chr21:39554968:M	ATATATATATATATATATATATAAAATATATATATATATATAAAATATATATATATATATATTTTATATATATATATATATATA	<9>,<9.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,4,0,3:7:186,57,37,65,34,44,76,0,24,56	1/3:0,1,0,2:3:72,35,28,31,23,23,19,0,6,10	2/3:0,1,7,7:18:255,152,103,94,55,42,126,18,0,80
-chr21	39555174	chr21:39555174:M	TTTTTCTTTCTTTTTCTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,10:13:255,0,47	0/1:2,6:9:171,0,28	1/1:0,19:19:255,57,0
-chr21	39555355	chr21:39555355:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:26:255,0,231	0/1:5,12:18:255,0,83	1/1:0,32:35:255,99,0
-chr21	39561125	chr21:39561125:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,17:29:234,0,139	0/1:18,22:41:255,0,209	1/1:0,43:43:255,127,0
-chr21	39565197	chr21:39565197:M	TTTTTTTTTTTTTCTTTTTCTTTTT	<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,9,0:14:225,0,104,237,92,255	0/1:8,13,0:24:255,0,171,255,145,255	1/2:1,15,18:36:255,255,255,255,0,255
-chr21	39565386	chr21:39565386:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGT	<25.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:4,1,7:14:130,67,172,0,98,80	0/2:7,3,7:19:148,43,218,0,138,130	1/2:0,5,14:20:255,162,107,72,0,14
-chr21	39565610	chr21:39565610:M	TTTTTTTTTCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:17:26,0,170	0/1:12,2:16:12,0,161	1/1:1,5:8:84,3,0
-chr21	39568414	chr21:39568414:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:14:133,0,146	0/1:6,11:21:239,0,134	1/1:0,9:10:251,29,0
-chr21	39570292	chr21:39570292:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:39:255,0,255	0/1:22,25:50:255,0,255	1/1:0,38:40:255,119,0
-chr21	39571324	chr21:39571324:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,10,10:21:255,159,221,159,0,215	1/2:1,7,7:15:179,102,152,102,0,150	1/1:0,33,0:35:255,100,0,255,102,255
-chr21	39573635	chr21:39573635:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,10:19:255,174,121,133,0,103	0/1:10,10,0:21:107,0,119,140,176,255	0/2:5,2,13:22:255,192,239,0,72,104
-chr21	39575782	chr21:39575782:M	ACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:18,16:36:255,0,255	0/1:8,13:23:243,0,125	0/1:22,9:32:119,0,255
-chr21	39584122	chr21:39584122:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:12:74,0,185	0/1:5,4:9:81,0,109	1/1:0,13:13:255,39,0
-chr21	39589605	chr21:39589605:M	AAAAAAAATAAATAAATAAATAAAATAAAAAAAAAAAAAAACAAAAAA	<46>,<47>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,7:19:255,110,74,219,0,167	1/2:0,6,4:10:208,59,41,103,0,76	1/1:0,18,0:19:255,57,0,255,56,255
-chr21	39591584	chr21:39591584:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,16:33:205,0,214	0/1:17,16:34:195,0,203	0/0:35,1:37:0,82,255
-chr21	39624852	chr21:39624852:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,19:38:248,0,249	0/1:19,21:41:255,0,220	0/0:29,0:29:0,86,255
-chr21	39642874	chr21:39642874:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:17:255,32,0	0/1:1,7:9:93,0,2	0/0:6,0:7:0,20,116
-chr21	39643052	chr21:39643052:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:29:190,0,172	0/1:20,11:32:108,0,254	0/0:35,3:38:0,58,255
-chr21	39643418	chr21:39643418:M	AAAAAAAAAAAAAAAAGAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:66,0,92	0/1:12,8:22:87,0,139	0/0:18,0:19:0,53,255
-chr21	39657655	chr21:39657655:M	ATCTATCTGTCTGTCTATCTATCTATCTGTCTA	<7.2>	.	.	Motif=ATCT	GT:AD:DP:PL	1/1:0,32:32:255,95,0	0/1:16,11:27:118,0,208	1/1:0,37:37:255,109,0
-chr21	39670212	chr21:39670212:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,16:31:206,0,188	0/0:31,0:34:0,98,255	0/1:16,16:33:193,0,202
-chr21	39677481	chr21:39677481:M	TGTTTTTTGTTTGTTTGTTTGTTT	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:18,11:29:113,0,241	0/1:20,15:35:178,0,255
-chr21	39679809	chr21:39679809:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<25>	.	.	Motif=GA	GT:AD:DP:PL	0/1:1,0:2:9,0,20	1/1:0,1:1:28,3,0	1/1:0,6:13:244,34,0
-chr21	39682187	chr21:39682187:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:28:0,76,255	0/1:16,14:34:165,0,199	0/1:18,10:29:92,0,246
-chr21	39682705	chr21:39682705:M	AAACAAACAAACAAACAAACAAACAAACA	<6.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:13,20:33:255,0,139	0/1:19,15:34:182,0,255
-chr21	39689801	chr21:39689801:M	TATATATATATATATATATATATATATATATATATA	<16>,<19>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,11,4:16:255,45,79,253,0,255	2/2:0,0,2:2:29,35,57,6,6,0	0/1:3,4,1:9:83,0,68,85,29,124
-chr21	39691888	chr21:39691888:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:14:14,0,151	1/1:2,12:14:172,7,0	0/1:10,4:16:45,0,130
-chr21	39697558	chr21:39697558:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:23,0,7	0/1:4,3:8:23,0,48	0/0:5,1:6:0,2,63
-chr21	39700601	chr21:39700601:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:44:0,129,255	0/1:20,21:43:247,0,250	0/1:22,21:44:255,0,255
-chr21	39700938	chr21:39700938:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/1:13,6:22:41,0,179	0/0:17,3:20:0,6,245
-chr21	39701615	chr21:39701615:M	AAAAAAAAAAAGAAAGAAAAAAAAGAAAAGAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,3:31:0,35,255	0/1:11,13:24:159,0,124	0/1:13,10:23:114,0,169
-chr21	39705825	chr21:39705825:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,1:9:1,0,89	0/1:8,8:19:111,0,77	0/1:2,4:6:50,0,16
-chr21	39715037	chr21:39715037:M	CCTTTCCTTTCCTTTTCTTTCTTTC	<4>	.	.	Motif=CCTTT	GT:AD:DP:PL	0/0:30,0:30:0,86,255	0/1:23,20:43:177,0,216	0/1:17,22:42:229,0,140
-chr21	39715050	chr21:39715050:M	TTTCTTTCTTTCGTTCTTTCTTTCTTTTCTTTCTTTCTCATCTCCCTTCCCTTCTCTTCCTTTCTTTCTTTTCTTTTCTTTCTTT	<20>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:9,0:10:0,26,145	0/1:3,2:6:25,0,31	0/1:2,5:10:68,0,9
-chr21	39721674	chr21:39721674:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<10.5>,<12.5>	.	.	Motif=CCTT	GT:AD:DP:PL	0/2:8,0,4:12:40,74,255,0,148,115	0/1:8,11,0:19:255,0,181,255,140,255	1/2:0,10,6:16:255,108,126,255,0,242
-chr21	39724068	chr21:39724068:M	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	<9>,<10>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,7,2:9:240,37,10,126,0,101	1/2:0,13,9:22:255,168,105,243,0,181
-chr21	39734423	chr21:39734423:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,7:13:160,63,125,86,0,66	1/2:2,4,5:11:105,31,102,55,0,49	0/2:10,2,4:18:12,7,255,0,76,70
-chr21	39734440	chr21:39734440:M	ACACACACACACACACACACACACACACACACACAC	<17>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/0:19,3,0:22:0,25,185,66,249,255	0/1:13,5,0:19:8,0,98,48,137,255	0/2:6,0,11:21:255,255,255,0,69,96
-chr21	39736044	chr21:39736044:M	CTCACTCTCACT	<1.8>	.	.	Motif=CTCACT	GT:AD:DP:PL	0/0:35,0:36:0,105,255	0/1:13,19:32:255,0,242	0/0:39,0:39:0,117,255
-chr21	39745057	chr21:39745057:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,18:33:255,255,246,255,0,189	0/1:27,23,1:52:255,0,255,255,255,255	2/2:1,2,43:46:255,255,255,117,98,0
-chr21	39747941	chr21:39747941:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:36:0,87,255	0/1:21,14:36:138,0,255	0/0:19,0:21:0,61,255
-chr21	39749214	chr21:39749214:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:25:255,65,0	0/1:11,7:21:134,0,247	1/1:0,29:30:255,87,0
-chr21	39750511	chr21:39750511:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:129,15,0	0/1:14,1:21:14,0,255	1/1:0,7:10:211,24,0
-chr21	39753742	chr21:39753742:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:43:255,127,0	0/1:15,25:40:255,0,154	1/1:0,56:56:255,165,0
-chr21	39753921	chr21:39753921:M	TTTTTTTGTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	0/1:23,18:41:203,0,255	1/1:0,48:49:255,144,0
-chr21	39755587	chr21:39755587:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:16:62,0,136	0/1:11,11:22:126,0,127	0/1:20,4:27:2,0,255
-chr21	39756090	chr21:39756090:M	CAAACAAACAAACAAACAAACAAACAAACAAAC	<5.2>,<6.2>,<7.2>	.	.	Motif=CAAA	GT:AD:DP:PL	1/2:0,16,15,0:31:255,255,203,255,0,223,255,251,255,255	2/3:0,0,21,12:33:255,255,255,187,218,124,255,255,0,255	1/1:0,37,0,0:37:255,111,0,255,109,255,255,111,255,255
-chr21	39757580	chr21:39757580:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:18,0,124	0/0:15,3:18:0,2,202	0/1:12,4:18:27,0,166
-chr21	39760579	chr21:39760579:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:11,13:25:168,0,122	1/1:0,39:40:255,117,0
-chr21	39773473	chr21:39773473:M	CTTTTCTTTTTTTTTC	<5.6>	.	.	Motif=CTTTT	GT:AD:DP:PL	1/1:0,32:33:255,98,0	0/1:13,17:31:255,0,255	1/1:0,43:44:255,132,0
-chr21	39787553	chr21:39787553:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:10:118,13,0	0/1:2,5:7:57,0,11	1/1:0,12:12:189,35,0
-chr21	39797219	chr21:39797219:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	0/1:2,6:8:79,0,11	0/1:2,7:14:118,0,15
-chr21	39803224	chr21:39803224:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:26:0,40,255	0/1:9,12:23:150,0,99	0/0:39,1:41:0,102,255
-chr21	39806269	chr21:39806269:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20,0:22:255,29,0,255,64,255	1/2:0,9,10:19:255,168,115,128,0,98	1/1:0,14,0:14:246,41,0,246,41,246
-chr21	39807319	chr21:39807319:M	CACACACACACACACACACACACACACACACACACACGCACACACAC	<19.5>,<21.5>,<25.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,13,0,6,0:21:255,164,137,255,178,255,255,0,255,255,255,116,255,255,255	1/2:0,14,8,0,0:22:255,210,168,255,0,255,255,217,255,255,255,217,255,255,255	3/4:0,0,0,7,4:14:255,255,255,255,255,255,62,70,70,29,121,152,152,0,119
-chr21	39809977	chr21:39809977:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:62,11,0	0/1:1,1:2:11,0,11	0/1:4,6:10:72,0,38
-chr21	39816411	chr21:39816411:M	GAGAGACAGAGAGAGAGAGGAGAG	<14.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:13,12:27:203,0,228	0/1:10,7:19:110,0,176	1/1:1,26:28:255,49,0
-chr21	39816429	chr21:39816429:M	GGAGAGGAGGGGAGGGGAGGGAAGGG	<6.2>	.	.	Motif=GGAGG	GT:AD:DP:PL	0/1:13,17:30:224,0,150	0/1:14,7:21:60,0,181	1/1:0,28:29:255,83,0
-chr21	39820810	chr21:39820810:M	TTATTTTATTTTATTTTTTTT	<4>	.	.	Motif=TTATT	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,27:27:255,81,0	1/1:0,29:29:255,87,0
-chr21	39823963	chr21:39823963:M	TATTTATTTATTTATTTATTTATTTATTTATT	<12>,<13>	.	.	Motif=TATT	GT:AD:DP:PL	0/2:6,0,11:17:255,210,255,0,160,128	0/1:14,8,0:22:172,0,255,144,255,255	2/2:0,0,15:15:255,255,255,45,44,0
-chr21	39826429	chr21:39826429:M	TATATATATATTTATCATATATGTATGACATATATATATA	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/1:14,11:26:184,0,255	0/1:17,8:25:111,0,255	0/0:36,0:36:0,108,255
-chr21	39827940	chr21:39827940:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,28:53:255,0,255	0/1:16,15:32:171,0,198	0/0:28,1:31:0,72,255
-chr21	39830454	chr21:39830454:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,26:54:255,0,255	0/1:20,23:44:255,0,235	0/0:46,2:48:0,105,255
-chr21	39834719	chr21:39834719:M	AGAGGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGCGAGAGAG	<15.5>,<38.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,15,6:23:255,174,129,255,0,255	1/1:0,13,0:19:255,17,0,255,42,255	2/2:0,0,1:5:61,61,61,9,9,0
-chr21	39837403	chr21:39837403:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:31,26:57:255,0,255	0/1:21,14:35:255,0,255	0/0:48,0:48:0,144,255
-chr21	39844867	chr21:39844867:M	AAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,5:15:113,138,222,0,88,119	0/1:5,4,0:11:38,0,42,64,69,215	0/2:2,1,10:14:215,222,255,0,17,27
-chr21	39853719	chr21:39853719:M	TTTTTTTCTTTTCTTTTGTTTTTTTCTTCTTCTTTTTTTTTTTTTTTTT	<47>,<48>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,3:8:32,46,147,0,76,58	0/0:5,0,0:5:0,15,136,15,99,86	1/2:1,8,3:12:224,28,29,123,0,108
-chr21	39867169	chr21:39867169:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:26:135,0,178	0/1:12,8:24:94,0,152	1/1:1,30:32:255,76,0
-chr21	39874662	chr21:39874662:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:46:255,134,0	1/1:0,38:40:255,114,0	1/1:0,32:35:255,99,0
-chr21	39878003	chr21:39878003:M	GAGAGAGAGAGAGAGA	<9>	.	.	Motif=GA	GT:AD:DP:PL	0/1:16,17:33:224,0,208	0/1:22,24:46:255,0,255	0/0:42,0:42:0,124,255
-chr21	39878973	chr21:39878973:M	TTTTCTTTTCTTTCCTTTTTCTTTTTTTTTTTT	<6.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:26,0:29:0,83,255	0/1:6,10:16:155,0,73	0/0:27,1:29:0,63,255
-chr21	39884801	chr21:39884801:M	AGAGAGAGAGAGAGAGAGAGAGACAGAGA	<16.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:12,15:30:255,0,255	0/1:11,11:26:255,0,235	0/0:24,0:26:0,77,255
-chr21	39887339	chr21:39887339:M	TTTTTTTTTGTTTTTTGGTTTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,14,2:29:178,0,135,169,180,255	0/2:15,0,13:29:255,219,255,0,243,255	1/1:4,25,0:29:255,17,0,255,84,255
-chr21	39889412	chr21:39889412:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,4:9:240,69,43,86,0,61	1/2:0,2,2:5:92,24,22,24,0,21	1/2:0,5,3:8:215,51,28,85,0,62
-chr21	39890523	chr21:39890523:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,11:26:255,203,235,255,0,255	0/1:20,18,0:39:220,0,244,255,255,255	1/2:0,8,14:22:255,253,255,145,0,168
-chr21	39897386	chr21:39897386:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:12:0,17,171	0/1:5,5:10:55,0,55	0/0:9,0:11:0,32,176
-chr21	39903868	chr21:39903868:M	AAAAAAAACAAAAAAAAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,53,0	1/1:1,15:16:231,30,0	0/1:1,1:2:11,0,11
-chr21	39905254	chr21:39905254:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,23,0:50:255,0,255,255,255,255	1/2:0,22,17:40:255,255,255,255,0,255	0/0:44,0,0:44:0,130,255,130,255,255
-chr21	39907797	chr21:39907797:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,19:32:255,0,148	0/0:40,1:41:0,103,255	0/1:11,21:32:255,0,106
-chr21	39912313	chr21:39912313:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:33:123,0,255	0/0:26,3:33:0,43,255	0/1:23,12:35:112,0,255
-chr21	39914574	chr21:39914574:M	AAAAAAAAAAAAAAGAAAAAAAAAA	<28>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8,1:9:245,27,0,147,9,122	1/2:0,1,3:6:125,50,33,36,0,24	1/1:0,3,0:5:111,14,0,82,14,74
-chr21	39915230	chr21:39915230:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,232	0/1:22,10:32:83,0,255	0/1:26,14:42:143,0,255
-chr21	39932406	chr21:39932406:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,23,14:37:255,249,144,255,0,255	0/1:18,18,1:38:210,0,210,241,255,255	2/2:0,0,35:37:255,255,255,111,108,0
-chr21	39933640	chr21:39933640:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,14:16:207,13,0	1/1:1,8:9:115,10,0	1/1:0,20:21:255,61,0
-chr21	39942651	chr21:39942651:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:24:255,52,0	0/1:6,13:23:186,0,46	0/1:14,7:22:67,0,178
-chr21	39955558	chr21:39955558:M	TTTTTTTTTTGTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/0:25,0:25:0,75,255	0/1:10,18:29:255,0,189
-chr21	39956182	chr21:39956182:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1,0:40:0,99,255,117,255,255	0/1:16,15,0:32:173,0,202,224,255,255	0/2:23,2,22:49:255,255,255,0,255,255
-chr21	39962325	chr21:39962325:M	CTTTTCTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:2,6:14:49,0,96	0/1:4,4:8:36,0,91	0/1:1,8:9:93,0,3
-chr21	39965557	chr21:39965557:M	CACACACAAGCACACACATGCACACACACACACACACAC	<18.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:25,1,0:26:0,58,255,78,255,255	0/2:7,1,18:26:255,255,255,0,106,135	0/1:13,19,0:35:255,0,156,255,241,255
-chr21	39971360	chr21:39971360:M	AAAAATAAAAAT	<1.8>	.	.	Motif=AAAAAT	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,37:39:255,113,0	1/1:0,34:36:255,105,0
-chr21	39971606	chr21:39971606:M	TTCTTTTCTTTTTTTT	<3.4>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:24,23:47:255,0,255	0/0:50,0:50:0,150,255	0/1:21,19:40:255,0,255
-chr21	39973795	chr21:39973795:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<20.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	2/4:0,0,13,0,9:22:255,255,255,254,255,222,255,255,160,255,255,255,0,255,255	1/2:0,18,12,0,0:31:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255	3/4:2,0,0,6,12:20:255,255,255,255,255,255,174,211,211,153,54,127,126,0,72
-chr21	39977704	chr21:39977704:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:202,0,201	0/1:9,10:19:119,0,102	1/1:2,25:28:255,46,0
-chr21	39983863	chr21:39983863:M	TCCCTCCCTCCCTCCCTCCCTCCCT	<7.2>,<8.2>	.	.	Motif=TCCC	GT:AD:DP:PL	1/2:0,9,4:13:184,53,17,95,0,83	1/2:1,6,3:11:98,13,8,36,0,73	1/1:1,16,3:22:210,22,0,149,22,208
-chr21	39984743	chr21:39984743:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<16>,<18>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,5,10,0:16:255,255,255,74,0,112,255,255,143,255	1/3:0,5,0,11:21:255,255,255,255,255,255,96,0,124,102	2/2:0,0,14,0:15:255,255,255,45,42,0,255,255,45,255
-chr21	39985947	chr21:39985947:M	CACACTACACACACACACTCACATATAACACAAACACACACCAAACACACAC	<25>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,6:15:72,0,126	0/1:7,8:15:100,0,81	1/1:0,9:9:168,27,0
-chr21	39986238	chr21:39986238:M	CACACACACACACACACACACACACACACACACACAC	<15.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,10,0:16:255,0,130,155,151,255	0/2:7,1,7:19:185,117,255,0,160,134	1/1:0,20,0:21:255,63,0,255,61,255
-chr21	39993395	chr21:39993395:M	TTTTATTTTACTTTTTTTTTTTT	<4.4>,<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/2:8,0,14:22:220,255,255,0,140,98	1/2:0,20,18:41:255,255,255,255,0,255	0/1:15,16,0:31:234,0,214,255,255,255
-chr21	40003928	chr21:40003928:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:43,0,73	1/1:0,1:4:26,2,0	1/1:0,8:9:229,24,0
-chr21	40005205	chr21:40005205:M	AAAAAAAAAAAAAAAAAAAAAAACCAAAAAACAAAAAAAAAAAA	<45>,<46>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,1:3:50,16,8,28,0,25	1/2:0,3,4:7:133,64,45,41,0,29	0/1:1,2,0:3:25,0,8,28,16,51
-chr21	40012908	chr21:40012908:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,24:25:255,255,255,75,74,0	2/2:0,3,27:33:255,255,255,89,43,0	1/2:2,17,16:35:255,251,188,224,0,227
-chr21	40015418	chr21:40015418:M	TTTTTTTTTTTTTTCTTTTTT	<19>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,4:23:255,103,47,255,0,255	1/2:0,18,13:34:255,255,255,255,0,255	1/1:0,30,0:32:255,90,0,255,93,255
-chr21	40017565	chr21:40017565:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:30:255,85,0	1/1:0,21:21:255,62,0	0/1:12,23:38:255,0,126
-chr21	40020531	chr21:40020531:M	GAGAGAGAGAGAGAGAGGAGAGAGA	<14.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:8,10:19:190,0,144	0/1:9,6:17:96,0,176	0/0:17,0:17:0,51,255
-chr21	40022781	chr21:40022781:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:228,0,189	0/1:25,25:52:255,0,255	0/0:60,0:61:0,179,255
-chr21	40029427	chr21:40029427:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,14:33:172,0,215	0/0:29,0:31:0,90,255	1/1:3,18:22:255,11,0
-chr21	40039299	chr21:40039299:M	AAATAAAAATCAAAAAAAAAA	<3.3>	.	.	Motif=AAATAA	GT:AD:DP:PL	0/1:11,15:27:228,0,151	0/1:14,18:32:255,0,192	0/0:37,0:37:0,110,255
-chr21	40040928	chr21:40040928:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,0:45:0,129,255	0/1:17,15:33:255,0,255	0/0:39,0:42:0,120,255
-chr21	40050488	chr21:40050488:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,10:21:125,0,144	0/0:24,1:27:0,61,255	1/1:0,21:21:255,62,0
-chr21	40061570	chr21:40061570:M	AAAAAAAAAAAAAAAAGAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,8:17:102,0,87	0/0:19,0:23:0,66,255	1/1:0,13:13:227,38,0
-chr21	40064117	chr21:40064117:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,11:36:105,0,255	0/1:17,13:30:145,0,216	1/1:0,29:29:255,86,0
-chr21	40067726	chr21:40067726:M	TCCCTCCCTCCCCTCATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	<7.2>	.	.	Motif=TCCC	GT:AD:DP:PL	1/1:0,6:8:255,24,0	0/0:0,0:2:0,5,29	1/1:0,7:8:255,24,0
-chr21	40069086	chr21:40069086:M	AGAAAAAAAAAAAAAAGAAAAAGAAAAGAAAGAAAA	<7.4>	.	.	Motif=AGAAA	GT:AD:DP:PL	0/1:8,9:19:131,0,116	0/0:14,0:15:0,43,255	0/1:10,7:19:102,0,149
-chr21	40070396	chr21:40070396:M	AAAAGAAAAGAAAAGAAAAGAAAAAGAAAGAGAAAGAAAGACAAAGAGAAAGAAA	<8.3>	.	.	Motif=AAAAGA	GT:AD:DP:PL	0/1:3,7:19:113,0,22	0/0:22,0:35:0,41,255	1/1:0,17:24:255,52,0
-chr21	40082695	chr21:40082695:M	AAAAGAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,22,13:36:255,204,136,255,0,255	0/2:17,0,12:30:122,176,255,0,255,220	1/2:0,14,13:28:255,198,153,255,0,180
-chr21	40084502	chr21:40084502:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACA	<13.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:8,1,18:28:255,255,255,0,213,175	2/2:1,0,17:20:255,255,255,2,50,0	0/1:5,18,0:24:255,0,96,255,149,255
-chr21	40097532	chr21:40097532:M	TAAACATAAACATA	<22.5>	.	.	Motif=TAAACA	GT:AD:DP:PL	0/0:34,9:43:0,20,255	0/0:44,4:48:0,96,255	0/1:42,19:61:47,0,255
-chr21	40097955	chr21:40097955:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<11.8>,<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:6,8,3:17:181,0,126,171,121,255	0/2:9,0,3:14:1,28,255,0,228,219	1/2:0,10,13:23:255,123,93,249,0,214
-chr21	40098861	chr21:40098861:M	CACCTCACCTC	<27>	.	.	Motif=CACCT	GT:AD:DP:PL	0/0:48,9:57:0,62,255	0/0:36,4:40:0,72,255	0/1:40,18:58:44,0,255
-chr21	40100636	chr21:40100636:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,8:27:62,0,255	0/0:15,2:18:0,10,209	0/0:25,3:30:0,32,255
-chr21	40106894	chr21:40106894:M	TATTTTATTTTTTTT	<3.2>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:1,15:17:255,28,0	1/1:0,24:27:255,77,0	.
-chr21	40117949	chr21:40117949:M	ACACACACACACACACACACACATACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,12:25:153,0,173	1/1:0,36:39:255,113,0	0/0:39,2:41:0,84,255
-chr21	40133602	chr21:40133602:M	AAAAAAAACAAAAAACAAAAAAAAAGAAAAGAAAGAAGAAAAAA	<43>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,10:20:135,0,132	1/1:0,26:26:255,77,0	0/0:27,0:27:0,80,255
-chr21	40137179	chr21:40137179:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:11:93,0,39	0/0:15,3:18:0,2,204	1/1:1,15:21:255,43,0
-chr21	40137595	chr21:40137595:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,24:25:255,255,255,71,64,0	1/2:0,18,10:29:255,145,88,255,0,238	2/2:0,2,22:25:255,255,255,70,35,0
-chr21	40141976	chr21:40141976:M	ACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6:22:102,0,255	1/1:0,21:22:255,66,0	0/0:38,0:39:0,117,255
-chr21	40145977	chr21:40145977:M	TGTATGTATGTATACATGTACATATGTATGTAT	<9.2>	.	.	Motif=TGTA	GT:AD:DP:PL	0/1:17,18:35:150,0,134	1/1:0,22:26:255,62,0	0/1:12,14:31:118,0,89
-chr21	40152117	chr21:40152117:M	AAAAAAAAAAACACAAAAAAAACAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,93,255	0/0:35,0:36:0,105,255	0/1:12,12:26:254,0,255
-chr21	40156054	chr21:40156054:M	TATATATAATATAATTTATATTATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,18:23:255,0,68	0/0:15,0:15:0,45,255	0/1:9,21:30:255,0,156
-chr21	40163071	chr21:40163071:M	ACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/3:11,0,0,4:18:71,106,255,60,255,255,0,204,255,255	0/2:10,0,8,1:20:201,233,255,0,178,255,118,255,255,255	1/3:0,16,1,10:29:255,255,244,255,150,255,255,0,255,255
-chr21	40164802	chr21:40164802:M	AAAATAAATAAATAAAATAAAATGAAATAAAA	<7.2>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:15,21:36:255,0,255	0/0:28,0:28:0,84,255
-chr21	40166989	chr21:40166989:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,23:40:255,0,147	0/1:5,15:23:211,0,43	1/1:1,28:29:255,67,0
-chr21	40174532	chr21:40174532:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:27:255,71,0	0/1:16,16:36:255,0,255	0/1:23,11:37:211,0,255
-chr21	40175771	chr21:40175771:M	ACACACACATACACACACACACACACACACACACACACGCACACACACACACACGCACACACACA	<34.5>,<37.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,5:5:141,141,141,15,15,0	1/2:0,2,2:4:101,51,45,51,0,46	1/1:0,3,0:3:83,9,0,84,9,86
-chr21	40188786	chr21:40188786:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,11:26:255,194,244,255,0,255	1/1:1,25,0:32:255,73,0,255,90,255	0/2:16,1,4:21:9,52,255,0,217,233
-chr21	40200017	chr21:40200017:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:22:111,0,138	0/1:13,7:23:69,0,164	0/1:10,5:18:37,0,155
-chr21	40201378	chr21:40201378:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,24:46:255,0,255	0/1:23,32:55:255,0,251	0/1:18,20:39:255,0,230
-chr21	40206687	chr21:40206687:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:37:153,0,232	0/1:10,12:29:137,0,136	0/1:12,15:30:175,0,142
-chr21	40214736	chr21:40214736:M	AAAAAAAAAAAAAAAAACAAAACAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,1:17:0,22,211	0/0:17,1:19:0,39,255	0/1:13,33:47:255,0,87
-chr21	40215226	chr21:40215226:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:3:77,9,0	.
-chr21	40215941	chr21:40215941:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,16:39:180,0,255	0/1:12,15:28:180,0,136	0/1:22,20:43:234,0,255
-chr21	40216284	chr21:40216284:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18:40:255,0,255	0/1:15,17:33:255,0,253	0/0:44,0:45:0,134,255
-chr21	40231125	chr21:40231125:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:28:159,0,168	0/1:12,9:23:111,0,142	1/1:2,24:32:255,56,0
-chr21	40240350	chr21:40240350:M	TTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:7:0,21,194	0/1:2,12:18:255,0,35	0/0:0,0:2:0,1,2
-chr21	40242150	chr21:40242150:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,5:43:0,39,255	0/1:17,14:31:143,0,192	0/0:35,3:39:0,63,255
-chr21	40257470	chr21:40257470:M	ACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,5:18:96,0,255	0/0:15,0:17:0,25,255	1/1:0,3:7:106,12,0
-chr21	40261653	chr21:40261653:M	ACACACACACACACACACACACACACACACACACA	<16.5>,<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,10,16,0:27:255,248,255,149,0,210,255,255,255,255	2/3:1,1,7,7:19:255,255,255,161,159,149,92,159,0,169	0/1:16,18,0,0:35:196,0,163,255,217,255,255,255,255,255
-chr21	40266778	chr21:40266778:M	ATATATATATATATATATATATA	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,1,0:6:65,14,8,28,0,71	1/1:0,4,0:5:107,12,0,110,15,135	2/2:0,0,4:10:232,150,132,27,19,0
-chr21	40266800	chr21:40266800:M	ACACACACACACACCCCCACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,2:5:12,0,25	0/0:8,0:8:0,22,102	0/1:6,3:9:14,0,52
-chr21	40280182	chr21:40280182:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2,0:10:7,0,107,30,132,217	0/2:12,0,2:14:15,33,196,0,200,255	1/2:2,7,3:12:137,17,18,68,0,109
-chr21	40282591	chr21:40282591:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,28	.	1/1:0,5:8:169,21,0
-chr21	40292061	chr21:40292061:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,15:30:197,0,196	0/1:11,19:30:252,0,109	0/1:19,18:37:224,0,242
-chr21	40292186	chr21:40292186:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,1,3:12:21,34,156,0,85,99	1/2:1,1,1:3:11,2,20,3,0,22	1/2:0,6,2:10:129,42,37,108,0,146
-chr21	40292501	chr21:40292501:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,1:47:0,120,255	0/0:38,1:42:0,105,255	0/1:18,27:47:255,0,207
-chr21	40296832	chr21:40296832:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:0,0:1:0,3,10	0/1:1,3:5:82,0,14
-chr21	40318337	chr21:40318337:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:51:255,0,208	0/1:15,20:36:248,0,169	1/1:0,28:29:255,85,0
-chr21	40321617	chr21:40321617:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/0:24,1:26:0,56,255	0/1:11,6:20:58,0,158
-chr21	40322522	chr21:40322522:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,18:29:255,0,103	0/1:13,14:28:177,0,149	0/1:12,14:27:187,0,141
-chr21	40329613	chr21:40329613:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAATAAAAAATAAA	<15>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,6:6:108,18,0	1/1:0,16:16:255,47,0
-chr21	40330274	chr21:40330274:M	TATATTTATTATATTATATGCATATATTTATATATAATAAATTATATATTTATTATATTATAT	<3.8>	.	.	Motif=TATAT	GT:AD:DP:PL	0/1:6,8:15:255,0,106	0/1:1,2:3:68,0,17	0/1:5,3:9:106,0,101
-chr21	40334716	chr21:40334716:M	ACCACAACCACAACC	<1.5>	.	.	Motif=ACCACA	GT:AD:DP:PL	0/1:23,12:35:129,0,255	0/1:14,23:37:255,0,146	0/1:15,21:36:255,0,176
-chr21	40342611	chr21:40342611:M	TGTGTGTGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:25:0,67,255	0/1:7,4:11:14,0,45	0/0:14,0:14:0,37,152
-chr21	40342627	chr21:40342627:M	TATATATATATATATATATATAT	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,5:18:111,0,255	0/1:0,0:7:18,0,25	0/0:13,0:16:0,36,255
-chr21	40349137	chr21:40349137:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,84	1/1:0,3:3:81,9,0	0/0:11,0:16:0,37,255
-chr21	40354849	chr21:40354849:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:22:255,45,0	1/1:0,13:13:255,39,0	0/0:2,0:3:0,9,69
-chr21	40356389	chr21:40356389:M	ATATATATATATATATATAT	<13>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,9:34:212,0,255	0/1:11,6:20:152,0,255	0/0:37,0:40:0,119,255
-chr21	40357862	chr21:40357862:M	AAAAAAAAACAAAAACAAAAA	<3.7>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/1:19,19:38:255,0,255	1/1:0,32:32:255,96,0	0/0:39,0:39:0,117,255
-chr21	40363253	chr21:40363253:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,30,255	0/1:2,4:7:110,0,44	0/0:4,0:8:0,15,145
-chr21	40369386	chr21:40369386:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/0:14,0:19:0,44,255	1/1:0,12:15:206,35,0	0/1:8,12:25:181,0,74
-chr21	40370256	chr21:40370256:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:30:0,70,255	0/1:13,13:26:148,0,148	0/0:35,2:39:0,78,255
-chr21	40370628	chr21:40370628:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,2:30:0,51,255	0/1:12,14:26:172,0,136	0/0:41,0:42:0,123,255
-chr21	40371423	chr21:40371423:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,23:41:255,0,194	0/1:20,24:48:255,0,220	0/0:42,4:48:0,68,255
-chr21	40378555	chr21:40378555:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:0,0,0	1/1:0,4:6:124,13,0	.
-chr21	40396680	chr21:40396680:M	CTACTACTACTACTACTACTACCACCACTCCTACCACAACTACTACCACTAC	<18.3>	.	.	Motif=CTA	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:5,8:14:101,0,47	0/0:17,0:18:0,50,255
-chr21	40398627	chr21:40398627:M	TTTTTTCTTTCTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:11:51,0,51	0/1:8,3:12:12,0,100	0/0:16,0:19:0,50,255
-chr21	40399270	chr21:40399270:M	ACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7.6>	.	.	Motif=ACAAA	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:6,16:22:226,0,44	0/0:23,0:23:0,68,255
-chr21	40402666	chr21:40402666:M	TTTTTTATTTGTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:32:0,76,255	0/1:16,16:33:190,0,182	0/0:39,2:41:0,85,255
-chr21	40403630	chr21:40403630:M	CACACACACACACACACACACACACACACACACA	<16>,<18>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,13:26:255,233,255,226,0,255	1/2:4,10,10:25:227,113,238,122,0,252	2/2:1,0,17:18:255,255,255,35,51,0
-chr21	40410760	chr21:40410760:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,15:38:255,0,255	0/1:20,13:33:255,0,255	0/0:45,0:50:0,148,255
-chr21	40411176	chr21:40411176:M	ACACACACACACACACACACACACACACACACACACACACACACACAC	<19>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/0:16,0,0:16:0,48,255,47,255,255	0/1:10,5,0:18:120,0,244,149,162,255	0/2:11,0,9:20:93,151,255,0,185,127
-chr21	40419139	chr21:40419139:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,5:15:47,0,139	1/1:1,19:20:255,41,0	0/0:20,1:21:0,44,255
-chr21	40425670	chr21:40425670:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:15:14,0,133	0/1:8,3:12:24,0,94	0/1:7,1:9:2,0,89
-chr21	40428235	chr21:40428235:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<22>,<26>,<27>	.	.	Motif=TG	GT:AD:DP:PL	1/4:0,6,0,0,3:10:217,52,78,216,92,253,213,48,214,211,173,0,164,169,164	1/2:0,11,7,0,0:18:255,196,154,255,0,255,255,196,255,255,255,196,255,255,255	3/4:0,0,0,6,4:10:218,235,255,235,255,255,57,69,69,39,101,102,102,0,73
-chr21	40428834	chr21:40428834:M	ACACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:43,0:44:0,130,255	0/0:47,0:48:0,141,255	0/1:15,17:32:219,0,181
-chr21	40432206	chr21:40432206:M	AATAAAAAATAAATATATAAATAAATAAATAAATA	<11.8>,<12.8>,<13.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,9,13,1:29:255,251,182,178,0,112,255,178,171,255	0/1:7,3,0,0:13:74,0,229,40,230,255,83,238,255,255	2/3:0,0,11,4:15:255,255,255,63,62,19,170,147,0,126
-chr21	40433347	chr21:40433347:M	AAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:44,0,20	0/1:1,1:4:17,0,31	1/1:0,3:3:79,9,0
-chr21	40435547	chr21:40435547:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,21,15:38:255,236,165,255,0,255	1/1:2,23,1:26:255,41,0,255,58,255	1/2:0,15,14:31:255,255,189,226,0,179
-chr21	40452238	chr21:40452238:M	ACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	0/3:14,0,0,10:24:233,255,255,255,255,255,0,255,255,255	1/3:0,14,0,5:20:255,149,107,255,148,255,255,0,235,255	0/2:11,1,5,0:18:114,69,255,0,255,255,150,255,255,255
-chr21	40453041	chr21:40453041:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21>,<24>,<29>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,8,5:18:255,255,255,153,153,121,251,255,0,239	1/2:0,6,7,0:13:255,187,178,167,0,145,255,196,167,255	1/3:0,9,0,3:14:255,103,77,255,105,255,252,0,252,238
-chr21	40457530	chr21:40457530:M	AAACAAACAAACAAACAAACAAACAAAAAAAC	<9>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:15,16:31:198,0,180	0/1:19,22:41:255,0,206	0/0:49,0:49:0,144,255
-chr21	40481531	chr21:40481531:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:1,5:6:64,1,0	0/1:2,3:5:35,0,18
-chr21	40487274	chr21:40487274:M	TGTGTGTGTGCATGTGTGCGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTG	<26>	.	.	Motif=TG	GT:AD:DP:PL	0/0:11,0:16:0,5,69	1/1:5,8:23:92,7,0	0/1:6,7:16:49,0,15
-chr21	40487327	chr21:40487327:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:11,20:37:221,0,45	0/1:12,14:30:140,0,73	0/0:25,3:29:0,41,255
-chr21	40492678	chr21:40492678:M	AGAACAGAAAAAAAGAAAGAA	<6.2>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:24,7:31:48,0,255	1/1:0,23:24:255,68,0	0/1:30,11:41:91,0,255
-chr21	40493864	chr21:40493864:M	AAAAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,6,6:22:145,7,208,0,90,193	1/2:0,3,9:12:255,196,173,65,0,33	0/0:9,1,0:10:0,1,217,24,219,239
-chr21	40493880	chr21:40493880:M	ATATATACATATATATACATATATATATA	<15>,<15.5>,<16.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,1,7,7,0:21:160,89,90,26,54,51,10,4,0,108,134,106,88,151,255	1/3:0,3,0,7,0:11:175,132,111,110,93,90,17,0,16,30,119,96,99,58,160	2/4:0,0,7,0,5:17:255,203,175,126,117,89,158,109,62,132,150,73,0,102,195
-chr21	40494825	chr21:40494825:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,23:47:255,0,255	0/1:32,14:46:112,0,255	0/0:53,3:56:0,110,255
-chr21	40516122	chr21:40516122:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,21:36:255,0,183	0/1:16,23:39:255,0,175	0/0:48,0:48:0,142,255
-chr21	40516889	chr21:40516889:M	ATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:12,0,8:23:187,213,255,0,147,255	0/2:8,0,7:16:165,182,254,0,96,180	0/1:16,8,0:27:37,0,135,111,210,255
-chr21	40519851	chr21:40519851:M	TGTGTGTGTGTATGCGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,7:25:93,0,255	0/1:16,13:33:229,0,255	0/0:31,0:31:0,93,255
-chr21	40530880	chr21:40530880:M	TCCATCCATCCATCCATCCATCCATCCATCCATCCATTCAACCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACCATCCAT	<11.2>	.	.	Motif=TCCA	GT:AD:DP:PL	1/1:0,9:9:239,27,0	1/1:0,8:8:217,24,0	.
-chr21	40532869	chr21:40532869:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>,<16>,<19>,<20>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,16,1,6:24:255,255,255,119,184,136,255,255,90,255,255,255,0,255,255	2/3:0,0,14,11,0:26:255,255,255,255,255,255,255,255,0,255,255,255,197,255,255	1/4:0,7,0,1,13:22:255,239,255,255,255,255,255,211,255,255,197,0,186,179,156
-chr21	40548504	chr21:40548504:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:21:0,62,255	0/0:26,0:26:0,76,255	1/1:1,23:24:255,53,0
-chr21	40554197	chr21:40554197:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,1:19:0,38,255	0/1:18,8:28:55,0,248	0/1:20,5:28:28,0,255
-chr21	40558448	chr21:40558448:M	AAAAAGAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,18:39:223,0,255	0/0:27,1:28:0,65,255	0/1:22,12:34:118,0,255
-chr21	40559459	chr21:40559459:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,5:22:255,76,25,255,0,241	0/1:6,5,2:14:103,0,142,55,81,129	0/2:6,0,7:14:85,93,241,0,95,67
-chr21	40559787	chr21:40559787:M	TTTTTTTTTTTTTTTTTTTT	<14>,<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,3,4:9:169,178,216,71,110,96,107,105,0,93	1/3:0,4,0,5:12:227,106,143,236,156,255,137,0,132,116	0/2:5,1,2,1:9:44,29,170,0,117,139,44,98,69,114
-chr21	40563649	chr21:40563649:M	TATGTTTATGTTTGTTTATATATATGTTTAT	<4.8>	.	.	Motif=TATGTT	GT:AD:DP:PL	0/1:11,11:23:24,0,24	0/0:2,0:2:0,4,13	1/1:0,16:16:103,34,0
-chr21	40572073	chr21:40572073:M	TGTGTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGT	<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,7,14:23:255,141,115,101,0,41	0/2:6,2,9:17:86,64,180,0,49,28	0/2:6,2,9:17:88,65,181,0,50,28
-chr21	40574707	chr21:40574707:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,50,0	0/1:3,3:8:69,0,59	1/1:0,13:17:255,44,0
-chr21	40577242	chr21:40577242:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:29:255,85,0	0/1:16,10:28:101,0,204	1/1:0,25:27:255,78,0
-chr21	40580081	chr21:40580081:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:33:226,0,173	0/0:28,0:35:0,100,255	0/1:21,7:30:39,0,255
-chr21	40583907	chr21:40583907:M	AAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,7:28:255,178,147,255,0,255	0/2:16,0,11:30:255,255,255,0,255,255	0/1:21,14,0:37:156,0,255,250,255,255
-chr21	40585180	chr21:40585180:M	TTTTTTTTTTTTTTT	<14>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:17,1,5:27:112,147,255,0,255,255	0/2:10,0,9:23:213,247,255,0,187,255	0/1:17,16,0:35:204,0,198,255,255,255
-chr21	40585420	chr21:40585420:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,2,9	1/1:0,9:9:247,27,0	0/0:1,0:2:0,6,35
-chr21	40593321	chr21:40593321:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,17:31:227,0,162	0/1:18,22:42:255,0,205	0/1:15,22:37:255,0,165
-chr21	40595378	chr21:40595378:M	AAAAAAAAAGAAAAGAAAAGA	<5.2>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:12,16:29:224,0,151	0/1:17,27:44:255,0,178	0/1:16,14:30:173,0,211
-chr21	40596870	chr21:40596870:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,15:32:193,0,233	0/0:35,0:35:0,103,255	0/1:20,19:39:239,0,255
-chr21	40597501	chr21:40597501:M	TTTTTTTTTTTTTTTTTTTTTTT	<11>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:4:136,145,171,12,12,0	1/2:0,15,1:17:255,33,24,255,0,255	0/2:2,0,1:5:33,44,137,0,80,73
-chr21	40598498	chr21:40598498:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:43,0,17	0/0:1,0:1:0,3,16	0/0:3,0:3:0,9,50
-chr21	40603926	chr21:40603926:M	TTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,9:21:255,161,101,215,0,155	2/2:0,1,15:19:255,255,252,49,25,0	0/1:4,10,1:17:255,0,83,155,87,227
-chr21	40611058	chr21:40611058:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,88	0/0:3,0:3:0,9,50	0/1:7,4:11:36,0,88
-chr21	40615282	chr21:40615282:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,20,116	0/1:9,1:14:12,0,113	0/1:3,7:11:99,0,19
-chr21	40617017	chr21:40617017:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,18	1/1:0,3:4:41,1,0	0/0:7,1:8:0,6,106
-chr21	40618664	chr21:40618664:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:255,0,255	0/1:15,13:34:255,0,255	0/1:16,18:38:255,0,255
-chr21	40621923	chr21:40621923:M	GGAAGGAAAGGAAGGAAGAAAAAAGAAAGGAAGGAAGGAA	<6>,<10.2>	.	.	Motif=GGAA	GT:AD:DP:PL	1/2:0,3,12:15:69,40,255,45,0,29	1/2:1,6,15:22:122,46,255,94,0,75	0/2:10,1,7:19:0,29,255,0,39,10
-chr21	40622872	chr21:40622872:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,15:35:183,0,249	1/1:2,31:33:255,62,0	0/0:35,0:41:0,118,255
-chr21	40623239	chr21:40623239:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:1,29:30:255,70,0	0/1:15,20:35:255,0,176
-chr21	40628693	chr21:40628693:M	CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<8.5>,<10.5>,<11.5>,<12.5>	.	.	Motif=CTAT	GT:AD:DP:PL	1/2:0,9,14,0,0:23:255,255,255,255,0,214,255,255,255,255,255,255,255,255,255	1/3:0,11,0,23,0:35:255,255,255,255,255,255,255,0,255,255,255,255,255,255,255	2/4:0,0,7,0,18:26:255,255,255,255,255,255,255,255,255,255,211,197,0,140,153
-chr21	40629042	chr21:40629042:M	TGTGTGTGTATGTGTGTGTAGTATGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<33>,<34>,<37>,<38>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,9,0,0:18:255,160,108,160,0,108,255,160,160,255,255,160,160,255,255	1/3:0,4,0,3,0:8:193,81,72,148,83,140,114,0,67,105,164,50,118,114,156	2/4:0,0,7,0,6:13:255,225,255,104,169,148,255,225,104,255,198,121,0,198,180
-chr21	40636761	chr21:40636761:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,18:37:255,0,255	0/0:20,0:25:0,54,255	0/1:10,14:25:255,0,194
-chr21	40639076	chr21:40639076:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:27:108,0,210	0/0:26,0:30:0,84,255	0/1:14,6:20:49,0,195
-chr21	40639668	chr21:40639668:M	TGTGTATGTGTATGTGTGTGCATGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,6:15:69,0,126	0/0:24,0:24:0,71,255	0/1:18,9:29:90,0,255
-chr21	40640821	chr21:40640821:M	CACACTCACACCCCACACACACAAAAACACCACACGCACACACACAC	<24.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,14:24:198,0,121	0/0:19,0:19:0,56,255	0/1:12,6:18:59,0,171
-chr21	40642043	chr21:40642043:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:17,0,123	0/1:7,8:17:85,0,89	0/1:4,2:6:17,0,52
-chr21	40648251	chr21:40648251:M	ACACACACACACACACACACACACACACACACTCACACAC	<16>,<21>,<24>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,10,10:21:255,255,255,255,255,253,179,255,0,241	1/2:0,10,9,0:21:255,153,211,255,0,255,255,247,255,255	0/3:18,0,1,9:32:222,255,255,255,255,255,0,255,255,255
-chr21	40652348	chr21:40652348:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,20:32:255,0,17	1/1:0,40:49:255,121,0	0/0:14,2:29:0,1,255
-chr21	40654095	chr21:40654095:M	AAAAAGAAAAAGAAAAAAGAAAAA	<3.8>	.	.	Motif=AAAAAG	GT:AD:DP:PL	1/1:0,1:1:6,2,0	1/1:0,11:11:64,22,0	0/0:16,0:19:0,30,90
-chr21	40655447	chr21:40655447:M	TTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,13,0:21:174,0,84,233,144,255	0/2:15,0,7:27:155,193,255,0,255,255	1/2:0,9,7:18:255,205,178,157,0,212
-chr21	40656523	chr21:40656523:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:23:101,0,193	0/0:27,0:29:0,85,255	0/1:17,19:41:255,0,211
-chr21	40663258	chr21:40663258:M	GTGTGTGTGTG	<4.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,4:22:16,0,255	0/1:7,3:10:26,0,98	0/1:15,6:21:53,0,220
-chr21	40669591	chr21:40669591:M	TTTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,60,0	0/1:13,8:27:184,0,255	1/1:3,25:28:255,1,0
-chr21	40670537	chr21:40670537:M	AAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,1:18:0,18,255	0/1:16,6:24:112,0,255	0/1:14,3:18:23,0,255
-chr21	40671693	chr21:40671693:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:5:0,0,82	0/0:8,0:11:0,33,255	0/1:3,3:7:82,0,71
-chr21	40674610	chr21:40674610:M	TTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTT	<5.3>	.	.	Motif=TTTTCT	GT:AD:DP:PL	1/1:0,2:3:38,6,0	0/0:1,0:3:0,3,18	1/1:0,4:6:75,12,0
-chr21	40675015	chr21:40675015:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,13:27:174,0,173	0/1:15,13:29:153,0,190	0/1:12,18:33:248,0,143
-chr21	40681490	chr21:40681490:M	TTTTTTTTTTTTTTT	<12>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,25,3,8:38:255,255,189,255,93,255,255,0,255,255	0/3:11,0,2,9:26:255,255,255,124,255,255,0,255,255,255	1/2:0,16,9,0:26:255,255,232,255,0,255,255,169,255,255
-chr21	40684063	chr21:40684063:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:8,7:15:80,0,98	1/1:1,19:22:255,46,0
-chr21	40698870	chr21:40698870:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,83	0/0:3,0:3:0,9,84	0/1:2,10:12:233,0,19
-chr21	40706181	chr21:40706181:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:22:0,53,255	0/0:9,1:10:0,14,116	0/1:6,5:12:42,0,56
-chr21	40708101	chr21:40708101:M	GGGGTAGGGGAAGGGCAAGTGGGAA	<4>	.	.	Motif=GGGGAA	GT:AD:DP:PL	0/0:34,0:34:0,99,255	0/0:29,2:32:0,51,255	0/1:18,17:35:186,0,203
-chr21	40712805	chr21:40712805:M	GAGACAGAGAGAGAGAGAGAGAGAGAGAGA	<17>	.	.	Motif=GA	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/0:37,0:38:0,114,255	0/1:12,14:28:255,0,249
-chr21	40716381	chr21:40716381:M	TGTGTGTGTGTGTGTGTGTG	<9>,<11>	.	.	Motif=TG	GT:AD:DP:PL	0/2:21,0,10:31:102,190,255,0,255,255	0/2:13,1,16:30:202,255,255,0,180,159	0/1:23,21,0:44:255,0,255,255,255,255
-chr21	40720675	chr21:40720675:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/0:36,0:36:0,106,255	0/1:22,21:43:255,0,255
-chr21	40726550	chr21:40726550:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0,0:40:0,118,255,120,255,255	0/1:15,21,1:37:255,0,161,255,248,255	0/2:21,2,22:46:255,255,255,0,255,255
-chr21	40731729	chr21:40731729:M	CCCCCCCCCCCGCCCCCC	<19>	.	.	Motif=C	GT:AD:DP:PL	0/1:3,3:6:35,0,35	0/0:12,0:12:0,35,203	1/1:1,24:25:255,56,0
-chr21	40739782	chr21:40739782:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:29:145,0,209	0/1:17,15:35:173,0,206	0/1:12,19:33:254,0,128
-chr21	40746376	chr21:40746376:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,12:34:237,0,255	0/1:22,21:44:255,0,255	0/1:20,23:45:255,0,255
-chr21	40755453	chr21:40755453:M	TAAAAAATAAATAAAAAATAAA	<6.5>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:9,15:24:218,0,103	0/1:21,14:35:151,0,255	0/1:12,12:24:154,0,154
-chr21	40756977	chr21:40756977:M	GTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,16:30:206,0,159	0/1:15,18:33:216,0,164	0/1:13,12:25:142,0,160
-chr21	40759959	chr21:40759959:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9.5>,<10.5>,<11.5>	.	.	Motif=ATTT	GT:AD:DP:PL	3/3:0,0,0,20:20:255,255,255,255,255,255,60,60,59,0	1/3:0,8,0,3:11:255,81,57,198,54,168,218,0,144,205	2/3:0,0,9,5:14:255,255,255,94,93,53,169,145,0,129
-chr21	40765100	chr21:40765100:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,18:32:247,0,152	0/1:18,19:40:231,0,219	0/1:19,19:38:237,0,235
-chr21	40766670	chr21:40766670:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:10:16,0,74	0/0:4,1:7:0,6,67	0/1:4,4:9:47,0,32
-chr21	40766693	chr21:40766693:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:42,0,204	0/1:6,1:8:6,0,137	0/1:12,3:16:33,0,255
-chr21	40767881	chr21:40767881:M	TCTCTCTTTCTCTCTCTC	<12>	.	.	Motif=TC	GT:AD:DP:PL	0/1:21,11:34:217,0,255	0/1:22,20:45:255,0,255	0/1:19,16:35:255,0,255
-chr21	40780399	chr21:40780399:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<6>,<7>,<12>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,17,2,0:19:255,57,0,255,27,202,255,57,255,255	1/3:0,9,3,5:20:255,55,97,146,95,191,255,0,91,255	1/2:0,7,4,1:12:255,41,22,81,0,62,255,28,68,255
-chr21	40780424	chr21:40780424:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:17,2:20:0,28,184	0/1:9,2:12:1,0,75	0/1:7,4:13:18,0,55
-chr21	40781013	chr21:40781013:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,18:32:250,0,175	0/1:12,19:32:250,0,132	0/1:20,18:38:224,0,255
-chr21	40781993	chr21:40781993:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:0,0:1:12,3,0	1/1:0,3:3:83,9,0
-chr21	40789268	chr21:40789268:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:30:0,69,255	0/1:18,23:44:255,0,199	0/0:42,1:44:0,111,255
-chr21	40789554	chr21:40789554:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,8:19:95,116,255,0,126,106	0/1:6,6,1:18:171,0,145,165,90,250	0/2:8,0,8:18:100,139,255,0,143,97
-chr21	40790167	chr21:40790167:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,9:11:238,0,21	0/1:3,8:13:198,0,57	0/1:4,14:19:255,0,62
-chr21	40791157	chr21:40791157:M	AAAAAAAAAAAAAGAAAAGAAAAA	<23>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,1,6:17:63,93,255,0,140,146	1/2:0,9,14:24:255,242,255,156,0,190	0/2:14,0,12:26:143,215,255,0,215,179
-chr21	40792124	chr21:40792124:M	TCTTCTTCTTCTTCTT	<6.7>	.	.	Motif=TCT	GT:AD:DP:PL	0/0:9,0:11:0,32,190	1/1:0,3:3:53,9,0	0/0:13,0:13:0,38,234
-chr21	40792138	chr21:40792138:M	TTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:5:0,7,28	0/1:2,9:13:220,0,23	0/0:3,0:3:0,9,86
-chr21	40794543	chr21:40794543:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:18:73,0,144	0/1:6,18:25:235,0,32	0/1:18,18:39:214,0,214
-chr21	40794889	chr21:40794889:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/1:17,12:29:124,0,212	0/0:40,0:41:0,120,255
-chr21	40795355	chr21:40795355:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,81,255	0/1:13,23:37:255,0,134	0/0:35,0:35:0,103,255
-chr21	40800716	chr21:40800716:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:11:37,0,88	0/0:6,1:8:0,7,97	0/0:14,2:20:0,13,223
-chr21	40800963	chr21:40800963:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:11,14:26:169,0,128	0/0:34,0:36:0,105,255
-chr21	40805699	chr21:40805699:M	TTTTCTTTCTTTTCTTTTCTTTTTTTT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:15,16:31:255,0,238	0/1:8,10:18:170,0,123	0/1:21,22:43:255,0,255
-chr21	40807110	chr21:40807110:M	AATCAATCAATCAATCAATCAATCAATCAATCAAT	<7.8>	.	.	Motif=AATC	GT:AD:DP:PL	1/1:0,36:37:255,107,0	1/1:0,30:30:255,88,0	1/1:0,32:32:255,95,0
-chr21	40808475	chr21:40808475:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13:16:236,28,0	1/1:2,16:20:219,3,0	0/1:6,23:31:255,0,15
-chr21	40817087	chr21:40817087:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,19:44:226,0,255	0/1:14,16:33:190,0,173	0/1:14,17:34:241,0,156
-chr21	40818548	chr21:40818548:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:1,0:1:0,3,27	1/1:0,15:16:255,48,0
-chr21	40821112	chr21:40821112:M	ATATATATAGATATATATATCTTCACATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,12:12:255,36,0	0/1:0,22:28:255,0,88
-chr21	40821372	chr21:40821372:M	CACACACACAGACACACGCGCGCACACACACACACACACACACACAC	<24.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,14:14:238,41,0	0/1:7,9:17:111,0,76
-chr21	40822319	chr21:40822319:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:27,3,0	1/1:0,3:3:79,9,0	.
-chr21	40823204	chr21:40823204:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,13,2:37:255,0,255,211,255,255	0/1:19,14,0:35:255,0,255,255,255,255	1/2:0,16,21:37:255,255,255,255,0,190
-chr21	40824404	chr21:40824404:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:97,0,97	0/1:8,12:21:153,0,76	0/1:5,9:15:124,0,45
-chr21	40825267	chr21:40825267:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<11.5>,<13.5>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:0,12,8:25:255,148,217,209,0,255	1/1:0,21,0:23:255,67,0,255,69,255	2/2:0,0,10:11:168,198,255,29,33,0
-chr21	40827469	chr21:40827469:M	AAAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,0:9:0,21,159	0/0:1,0:4:0,1,19	1/1:0,9:20:217,20,0
-chr21	40827484	chr21:40827484:M	AAAGAAAAGAAAGAAAGAAA	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:20,0:22:0,60,255	0/0:19,0:23:0,59,255	0/1:8,18:32:255,0,153
-chr21	40831308	chr21:40831308:M	CACACACACACAGGCACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,16:31:217,0,198	1/1:0,34:34:255,100,0	0/1:17,25:43:255,0,196
-chr21	40834410	chr21:40834410:M	AATAATAATAATAATAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	<15>,<21>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:8,10,0:18:247,0,184,255,151,255	0/1:5,4,0:10:94,0,122,101,81,174	1/2:0,5,4:9:199,74,94,136,0,124
-chr21	40843369	chr21:40843369:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,9:16:204,0,127	0/1:17,14:34:255,0,255	0/1:10,25:37:255,0,172
-chr21	40843791	chr21:40843791:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,12:22:160,0,80	0/1:14,7:24:79,0,166	0/1:11,8:21:89,0,132
-chr21	40851703	chr21:40851703:M	AAAAAAAGAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,2:45:0,95,255	0/1:14,18:33:230,0,150	0/0:39,2:41:0,84,255
-chr21	40853041	chr21:40853041:M	CACACACACACACACACACACACACACACACACACA	<23>,<25>,<26>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,5,0,2:8:207,54,36,183,35,174,153,0,148,146	2/3:0,0,5,6:11:255,255,255,100,100,68,84,83,0,52	1/2:0,4,5,0:10:255,140,122,110,0,89,209,88,109,194
-chr21	40853692	chr21:40853692:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,77,255	0/1:21,13:36:140,0,255	0/0:28,2:30:0,53,255
-chr21	40855201	chr21:40855201:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/1:5,5:13:79,0,50	0/1:8,3:11:22,0,111
-chr21	40856358	chr21:40856358:M	GAGAGAGAGAGAGAGAGAGA	<8>	.	.	Motif=GA	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:23,0:25:0,70,255	0/1:12,22:36:255,0,194
-chr21	40857178	chr21:40857178:M	ACACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:34:0,100,255	0/1:16,17:33:202,0,184	0/1:19,11:31:109,0,255
-chr21	40867099	chr21:40867099:M	AGAGAGAGAGAGAGAGA	<10.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,14:33:218,0,255	0/0:5,0:5:0,15,110	0/1:8,14:23:243,0,112
-chr21	40875086	chr21:40875086:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,3,0:18:21,0,180,68,194,255	0/2:6,1,4:13:50,59,184,0,60,78	0/1:11,5,0:20:65,0,137,111,160,255
-chr21	40883733	chr21:40883733:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:27:0,79,255	0/1:13,16:30:211,0,141	0/1:13,11:25:136,0,161
-chr21	40884083	chr21:40884083:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:15,6:22:43,0,212	0/1:10,8:18:95,0,131
-chr21	40889997	chr21:40889997:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,23:34:255,0,178	0/1:17,32:52:255,0,255	1/1:0,38:41:255,122,0
-chr21	40901110	chr21:40901110:M	CCCCCGCCCCCTCCCCCCCCCCC	<22>	.	.	Motif=C	GT:AD:DP:PL	0/1:7,19:28:255,0,51	0/1:2,7:10:92,0,7	1/1:0,19:19:255,56,0
-chr21	40905882	chr21:40905882:M	AAAAAAAAGAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,63,255	0/0:29,2:31:0,56,255	0/1:21,14:36:157,0,255
-chr21	40909827	chr21:40909827:M	ATATATATATATATATATATACTTTTATATATAT	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,7:25:170,0,255	0/0:5,0:5:0,15,134	1/1:0,13:13:255,39,0
-chr21	40912957	chr21:40912957:M	TTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5,0:7:177,21,0,129,20,115	1/2:0,3,2:5:144,35,20,52,0,37	1/2:0,6,3:11:249,42,23,104,0,90
-chr21	40913377	chr21:40913377:M	ACACACACACACACACACACACACACACACACACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,28:28:255,84,0	1/1:0,11:21:255,36,0	1/1:0,35:38:255,113,0
-chr21	40913800	chr21:40913800:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,33:38:255,37,0	0/1:17,19:36:229,0,194	1/1:3,55:59:255,119,0
-chr21	40922518	chr21:40922518:M	CACACACACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	.	1/1:0,12:13:223,38,0	.
-chr21	40922802	chr21:40922802:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<7>,<10>,<12>	.	.	Motif=TATC	GT:AD:DP:PL	0/3:19,0,0,9:28:91,172,255,171,255,255,0,255,255,255	1/3:0,17,0,7:24:255,125,144,255,192,255,255,0,255,255	0/2:13,0,10,0:23:120,186,255,0,242,176,185,255,206,255
-chr21	40922965	chr21:40922965:M	AAAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,31:34:255,255,255,101,93,0	1/2:0,19,15:36:255,255,255,255,0,255	2/2:0,1,40:46:255,255,255,131,98,0
-chr21	40923354	chr21:40923354:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:1,30:31:255,73,0	1/1:1,43:44:255,111,0
-chr21	40924546	chr21:40924546:M	AAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17,1:21:255,54,0,255,42,255	1/2:0,10,6:17:255,102,55,172,0,137	1/1:0,24,2:27:255,78,0,255,43,255
-chr21	40925384	chr21:40925384:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,40:41:255,102,0	1/1:0,39:39:255,115,0	1/1:0,49:49:255,145,0
-chr21	40926278	chr21:40926278:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,20:22:255,46,0	1/1:0,31:35:255,99,0	1/1:0,36:36:255,106,0
-chr21	40927731	chr21:40927731:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,60,1:61:255,180,0,255,161,255	1/2:0,18,32:50:255,255,255,255,0,177	1/1:0,53,0:53:255,159,0,255,156,255
-chr21	40935019	chr21:40935019:M	TTTTTCTTTTCTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	<44>,<45>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,4:7:128,58,49,51,0,31	1/2:0,1,3:4:65,41,38,16,0,5	1/2:0,2,2:4:77,28,22,34,0,22
-chr21	40950142	chr21:40950142:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,21:44:255,0,255	0/1:25,27:52:255,0,255	1/1:0,40:40:255,118,0
-chr21	40953242	chr21:40953242:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:42:0,105,255	0/1:18,21:41:255,0,209	0/0:42,3:46:0,80,255
-chr21	40964233	chr21:40964233:M	ATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:26,28:58:255,0,255	0/1:24,22:46:238,0,255	1/1:0,46:51:255,148,0
-chr21	40966924	chr21:40966924:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:21:102,0,139	0/1:9,10:19:116,0,99	1/1:1,24:28:255,63,0
-chr21	40973828	chr21:40973828:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,255	0/1:17,19:38:255,0,255	1/1:0,42:46:255,134,0
-chr21	40986198	chr21:40986198:M	AAAAGGAAAAGAAAAGAAAAGAA	<5.4>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:24,22:46:255,0,255	0/1:20,16:36:255,0,255	1/1:0,33:33:255,99,0
-chr21	40989717	chr21:40989717:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,16:41:255,0,255	0/1:19,11:33:220,0,255	1/1:0,30:31:255,90,0
-chr21	40999709	chr21:40999709:M	TTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,2,17:35:255,255,255,0,255,255	0/2:25,1,10:40:195,160,255,0,255,255	1/2:0,7,21:28:255,255,255,124,0,42
-chr21	41000138	chr21:41000138:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.8>,<9.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/2:9,0,14,0:23:255,255,255,0,250,205,255,255,172,255	0/1:3,10,0,0:13:255,0,54,255,83,255,255,54,255,255	2/3:0,0,9,12:21:255,255,255,193,226,166,169,170,0,109
-chr21	41006219	chr21:41006219:M	GTGTGTGTGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,16:33:205,0,224	0/1:13,19:32:245,0,138	0/0:32,0:33:0,97,255
-chr21	41012829	chr21:41012829:M	CACACTCACACACGCACTCACACACATACCCAACACAAACTCACACACA	<23.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,7:22:70,0,198	0/0:22,0:22:0,65,255	0/1:16,13:29:155,0,204
-chr21	41015243	chr21:41015243:M	AAATAAATAAATAAATAAATAA	<8.5>,<8.8>,<9.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,12,0,4:17:255,84,37,255,84,255,232,0,214,186	3/3:0,0,0,8:8:245,169,147,245,169,245,24,24,24,0	1/2:0,17,11,0:28:255,239,162,255,0,255,255,239,255,255
-chr21	41019616	chr21:41019616:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:22:172,0,98	1/1:1,20:26:255,45,0	0/0:25,0:25:0,73,255
-chr21	41023102	chr21:41023102:M	ATATATATATATATATATATATATATATATATATATATA	<12.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:1,0,10:18:255,209,255,0,77,39	2/2:0,0,0:1:8,10,11,2,3,0	1/2:0,11,4:22:255,106,48,255,0,215
-chr21	41023140	chr21:41023140:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15.5>,<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:1,0,3,5:10:73,99,234,33,47,20,12,36,0,8	.	1/2:0,5,3,2:10:151,37,101,126,0,114,127,8,111,122
-chr21	41035097	chr21:41035097:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAAGAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:0,23:23:255,67,0	0/1:13,3:18:1,0,196
-chr21	41041811	chr21:41041811:M	AGAAAGAGAAAGAGAAAGAAAGAGAGAGACAGAAAGAAAGAAAGAAAAAAGAAAGA	<1.5>	.	.	Motif=AGAAAG	GT:AD:DP:PL	1/1:0,6:7:169,21,0	.	0/1:8,5:14:83,0,142
-chr21	41044192	chr21:41044192:M	TCTCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:1,45:46:255,117,0	0/1:11,22:34:255,0,117
-chr21	41049550	chr21:41049550:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,22,18:41:255,255,227,255,0,255	2/2:0,3,32:37:255,255,255,102,55,0	0/1:7,20,0:27:255,0,49,255,126,255
-chr21	41051733	chr21:41051733:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:34:223,0,197	0/0:27,0:27:0,79,255	0/1:21,14:39:148,0,255
-chr21	41055109	chr21:41055109:M	AAAAAAAAAAAAAAAAA	<15>,<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,19,12,0:32:255,170,139,255,0,255,255,220,255,255	2/3:1,0,6,7:15:181,204,255,116,202,177,88,106,0,135	0/1:13,22,1,0:38:255,0,255,255,215,255,255,234,255,255
-chr21	41055830	chr21:41055830:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<22>,<23>,<26>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,6,5:11:217,220,223,133,136,118,103,103,0,150	1/3:0,5,0,1:6:152,27,13,109,28,96,129,0,82,130	2/3:0,0,5,6:11:227,231,236,161,165,151,84,84,0,118
-chr21	41062611	chr21:41062611:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,12:25:155,224,255,0,210,174	0/0:29,2,4:35:0,66,255,31,255,255	1/2:0,18,18:36:255,255,255,255,0,255
-chr21	41062905	chr21:41062905:M	AAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:13:106,0,139	0/0:11,0:15:0,36,255	1/1:0,18:23:255,68,0
-chr21	41070490	chr21:41070490:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,11:36:194,0,255	0/0:32,0:37:0,96,255	0/1:15,15:32:255,0,255
-chr21	41070734	chr21:41070734:M	TCTCTCTCTCTC	<5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:25,20:45:255,0,255	0/1:16,15:31:182,0,200	0/1:23,17:40:202,0,255
-chr21	41073040	chr21:41073040:M	TCTATCTATCTAGCTATATATCTAT	<5.2>	.	.	Motif=TCTA	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:49,0:49:0,144,255	0/1:15,15:30:200,0,192
-chr21	41085124	chr21:41085124:M	TTGTTGTTGTTGTTGTGTTGTTGTTGTTTTTGTTGTTGTTGCTGTT	<14.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:14,15:30:182,0,162	0/0:24,0:26:0,70,255	0/1:10,11:21:129,0,112
-chr21	41085947	chr21:41085947:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,11:20:144,0,107	0/0:20,0:21:0,61,255	0/1:6,13:22:181,0,57
-chr21	41091408	chr21:41091408:M	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAGGAA	<13>,<17>	.	.	Motif=GAAG	GT:AD:DP:PL	1/2:0,20,3:23:255,56,23,255,0,255	2/2:0,0,1:2:17,20,30,3,3,0	1/2:0,8,4:12:255,73,87,221,0,209
-chr21	41093559	chr21:41093559:M	CACATACACACACACA	<6>	.	.	Motif=CA	GT:AD:DP:PL	0/0:38,0:40:0,116,255	0/0:38,0:38:0,114,255	0/1:18,7:25:104,0,255
-chr21	41093587	chr21:41093587:M	ACACACACACACACACACACACACACACA	<19.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6,0:22:177,0,255,222,255,255	0/0:26,0,0:26:0,78,255,78,255,255	1/2:0,5,4:10:255,117,102,177,0,165
-chr21	41093868	chr21:41093868:M	TTTTTTTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,6:12:68,98,255,0,60,27	0/0:10,0,0:13:0,31,255,30,172,143	1/2:0,13,3:24:255,42,71,255,0,255
-chr21	41099351	chr21:41099351:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5,0:7:154,0,10,166,27,209	0/0:3,0,0:4:0,12,115,9,96,93	1/2:1,3,10:16:255,255,255,65,0,68
-chr21	41103102	chr21:41103102:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0,0:7:0,21,198,21,144,125	0/2:3,0,3:6:34,43,119,0,50,34	0/1:7,3,0:10:53,0,169,51,120,145
-chr21	41103488	chr21:41103488:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<26>,<27>	.	.	Motif=GT	GT:AD:DP:PL	0/3:11,0,0,2:13:21,54,255,34,255,255,0,255,255,255	2/3:0,0,5,5:10:255,255,255,83,83,54,83,83,0,54	0/1:9,5,0,0:14:110,0,235,133,251,255,137,251,255,255
-chr21	41107199	chr21:41107199:M	AAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3,0:14:57,0,221,78,233,255	0/0:18,0,0:23:0,63,255,63,255,255	1/2:0,3,4:9:196,106,90,78,0,61
-chr21	41108362	chr21:41108362:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:18,0,23:41:255,255,255,0,255,221	0/0:27,0,2:30:0,84,255,52,255,255	1/2:0,17,10:27:255,156,105,255,0,235
-chr21	41108524	chr21:41108524:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:22:0,46,255	0/0:21,0:24:0,69,255	0/1:7,8:16:97,0,81
-chr21	41112478	chr21:41112478:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:33:0,93,255	0/0:24,0:28:0,83,255	0/1:16,9:26:162,0,255
-chr21	41115488	chr21:41115488:M	TTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:155,18,0	.	1/1:0,4:6:123,15,0
-chr21	41116336	chr21:41116336:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,14:26:196,0,132	0/0:34,0:34:0,100,255	1/1:0,32:32:255,94,0
-chr21	41125939	chr21:41125939:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:24,17:42:189,0,255	0/0:46,2:48:0,105,255
-chr21	41126166	chr21:41126166:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,6:30:73,0,255	0/0:18,0:23:0,62,255	1/1:1,14:17:255,18,0
-chr21	41129065	chr21:41129065:M	AACAAAACAAAACAACAAAAAAAAAACACACACACAAAAAAACAAAACAACAACAACAACAA	<22.3>,<22.7>,<23.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/3:0,14,0,6:21:255,151,105,255,109,231,255,0,172,255	1/2:0,7,12,0:19:255,152,97,91,0,35,255,141,90,255	3/3:0,0,0,3:3:87,84,81,64,64,56,9,9,9,0
-chr21	41131440	chr21:41131440:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:14,18:32:255,0,175	0/1:24,20:44:238,0,255	1/1:0,37:37:255,109,0
-chr21	41140799	chr21:41140799:M	TGTGTTGTGTTGCTGTT	<2.6>	.	.	Motif=TGTGT	GT:AD:DP:PL	0/1:8,23:32:255,0,131	0/0:30,0:30:0,90,255	1/1:0,28:35:255,84,0
-chr21	41140817	chr21:41140817:M	GTGGTGGTGGTGGTGGTGGTG	<5.3>	.	.	Motif=GTG	GT:AD:DP:PL	0/1:13,25:38:255,0,246	0/0:30,0:30:0,90,255	1/1:0,41:41:255,123,0
-chr21	41145711	chr21:41145711:M	TTTTTTCTTTTCTTTTTTTTCTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,11:17:156,0,62	0/1:11,8:19:85,0,137	1/1:0,28:30:255,88,0
-chr21	41150797	chr21:41150797:M	TGTGTGTGTGGTGTGTGATGTATGTGTCTGGGTGTGTGATGTGAGGTGTGTAGTGTGGTGTG	<32>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,6:13:73,0,91	0/0:23,0:23:0,67,255	0/1:9,3:12:19,0,127
-chr21	41150916	chr21:41150916:M	TGTGTGTGTGTGTG	<6>	.	.	Motif=TG	GT:AD:DP:PL	0/1:23,7:30:50,0,255	0/0:44,0:44:0,130,255	0/1:16,14:30:181,0,213
-chr21	41154937	chr21:41154937:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,0,9:16:117,162,255,0,108,81	0/2:10,1,3:15:11,26,190,0,119,144	1/2:3,5,8:19:154,94,176,58,0,118
-chr21	41160431	chr21:41160431:M	ATATATATAGAAATATATATTACATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:9:217,21,0	1/1:0,0:1:1,0,0	1/1:0,2:4:86,11,0
-chr21	41168979	chr21:41168979:M	CCCTCCCTCCC	<2.5>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:6,3:9:6,0,34	0/0:3,0:4:0,1,19	0/0:4,0:4:0,10,38
-chr21	41168987	chr21:41168987:M	CCCCCCCGCCCCCCCCCCACCCC	<22>	.	.	Motif=C	GT:AD:DP:PL	1/1:1,8:10:127,8,0	.	1/1:0,1:1:18,3,0
-chr21	41169450	chr21:41169450:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/1:10,11:24:129,0,124	0/1:10,23:34:255,0,81
-chr21	41170216	chr21:41170216:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,32:47:255,0,122	0/1:21,21:44:250,0,251	1/1:0,45:45:255,132,0
-chr21	41189195	chr21:41189195:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,22:41:255,0,201	0/1:18,23:41:255,0,193	0/1:15,14:29:166,0,184
-chr21	41196316	chr21:41196316:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,30:32:255,76,0	1/1:1,34:35:255,86,0	1/1:1,37:40:255,100,0
-chr21	41197267	chr21:41197267:M	TTTTTTTTGTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:20:244,20,0	1/1:1,23:29:255,25,0	1/1:1,24:28:255,44,0
-chr21	41197656	chr21:41197656:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,20:29:255,0,81	0/1:26,34:62:255,0,255	0/1:28,19:47:205,0,255
-chr21	41198850	chr21:41198850:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<11.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:15,5:20:77,0,255	0/1:5,3:8:58,0,114	0/1:11,9:20:186,0,246
-chr21	41200191	chr21:41200191:M	AAAAAAAAAAACAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:195,0,196	0/1:11,7:20:81,0,131	0/1:21,18:40:207,0,254
-chr21	41218870	chr21:41218870:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:25:177,0,255	0/1:23,7:32:87,0,255	0/1:18,9:28:162,0,255
-chr21	41221045	chr21:41221045:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:13:104,0,52	0/1:14,6:24:43,0,214	0/1:11,15:30:203,0,135
-chr21	41221828	chr21:41221828:M	AAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:194,14,0	0/1:2,7:10:193,0,31	0/1:0,3:8:81,0,18
-chr21	41223354	chr21:41223354:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:29:116,0,234	0/1:17,14:32:159,0,201	0/1:16,13:30:153,0,199
-chr21	41225234	chr21:41225234:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,13:25:173,0,127	1/1:1,25:26:255,59,0	0/1:10,13:25:178,0,106
-chr21	41232869	chr21:41232869:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,5:19:44,0,152	0/1:7,5:12:50,0,85	0/1:8,9:17:109,0,91
-chr21	41242340	chr21:41242340:M	TCTCTCTCTCTCTCTCTC	<10>	.	.	Motif=TC	GT:AD:DP:PL	0/1:22,17:39:202,0,255	0/1:18,20:39:239,0,213	0/1:18,21:40:255,0,219
-chr21	41253442	chr21:41253442:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:60,0,60	0/0:18,0:19:0,55,255	0/1:5,7:13:87,0,52
-chr21	41259442	chr21:41259442:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,26:43:255,0,194	0/0:43,2:45:0,96,255	0/1:26,21:49:245,0,255
-chr21	41265174	chr21:41265174:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,16,0:37:189,0,255,255,255,255	1/2:3,19,10:32:255,127,196,255,0,255	0/1:9,14,0:24:196,0,93,255,138,255
-chr21	41266942	chr21:41266942:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<18>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,15:28:255,255,194,236,0,157	1/2:0,14,12:27:255,207,130,248,0,173	1/2:0,17,10:27:255,178,100,255,0,226
-chr21	41279025	chr21:41279025:M	TTGTTTTGTTTTTTTTG	<3.6>	.	.	Motif=TTGTT	GT:AD:DP:PL	0/1:21,30:51:255,0,255	0/1:22,15:37:255,0,255	0/1:27,31:58:255,0,255
-chr21	41286120	chr21:41286120:M	ATAGATAGATAGATAGATAGATAGATAGATAAATAAATGATAGATAGATA	<10.5>,<11.5>,<13.5>,<14.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/4:0,3,0,0,9:12:255,253,246,255,255,255,255,175,233,234,83,0,58,84,57	2/4:0,0,11,0,8:19:255,255,255,222,226,194,255,255,146,255,200,200,0,255,255	1/3:0,11,0,11,0:22:255,207,255,255,255,255,255,0,207,255,255,207,255,255,255
-chr21	41291172	chr21:41291172:M	CACACACACACACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,15:34:191,0,238	0/0:43,0:43:0,127,255	0/1:26,27:53:255,0,255
-chr21	41308519	chr21:41308519:M	TTTTTGTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:82,0,18	0/1:1,0:3:3,0,36	0/1:4,4:9:108,0,91
-chr21	41311252	chr21:41311252:M	ATATATATATATATATATATATATATATATATATATATATATATATGTATATATA	<29.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,3:4:52,0,10	.	0/0:0,0:1:0,0,0
-chr21	41312710	chr21:41312710:M	TGTGTGTGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,1,10,7:18:255,255,255,190,172,158,191,164,0,255	1/2:0,15,10,0:25:255,146,101,255,0,188,255,174,255,255	0/3:6,0,0,4:11:97,115,255,115,222,205,0,162,107,151
-chr21	41313801	chr21:41313801:M	TTGTTGTTGTTGTTGTTGTT	<7.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:18,17:35:232,0,245	0/1:22,15:37:168,0,255	0/1:20,18:39:229,0,255
-chr21	41314763	chr21:41314763:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,27:41:255,0,131	0/1:17,20:40:232,0,189	0/1:14,20:34:252,0,147
-chr21	41330135	chr21:41330135:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:18:208,0,1	0/1:11,13:30:158,0,133	1/1:0,15:17:255,49,0
-chr21	41333132	chr21:41333132:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:32:0,94,255	0/1:17,19:38:226,0,200	0/0:40,6:47:0,29,255
-chr21	41346023	chr21:41346023:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:43:255,0,255	0/0:42,0:43:0,126,255	0/1:6,30:47:255,0,30
-chr21	41352797	chr21:41352797:M	AAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,20,14:34:255,255,172,255,0,255	0/1:16,6,0:22:102,0,255,107,255,255	2/2:0,0,18:18:255,255,255,54,53,0
-chr21	41355557	chr21:41355557:M	AAACAAACAAACAAACAAACAAACA	<5.2>,<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,0,36:36:255,255,255,107,108,0	1/2:0,13,16:29:255,255,255,230,0,255	0/2:26,0,24:50:255,255,255,0,255,255
-chr21	41356041	chr21:41356041:M	ACACACACACACACACACACACACACACACACACACACACACACA	<19.5>,<21.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	3/4:0,0,0,11,9:20:255,255,255,255,255,255,153,154,154,95,157,188,187,0,130	1/4:0,14,0,0,9:25:255,255,232,255,255,255,255,158,255,255,255,0,255,255,255	2/3:1,0,4,4,0:11:104,119,239,52,113,94,64,111,0,109,120,193,69,128,199
-chr21	41362741	chr21:41362741:M	TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:121,21,0	1/1:0,6:6:99,17,0	0/1:2,3:5:36,0,19
-chr21	41365204	chr21:41365204:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,30:30:255,88,0	0/1:22,16:38:189,0,255
-chr21	41373806	chr21:41373806:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:6:0,17,96	0/1:10,3:14:13,0,129	0/1:11,4:15:25,0,145
-chr21	41384839	chr21:41384839:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,4:19:29,0,182	0/1:16,14:32:146,0,200	0/0:23,3:27:0,26,255
-chr21	41386996	chr21:41386996:M	AACAACAACAACAACAA	<4.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:27,20:47:255,0,255	0/1:16,18:34:232,0,191	0/0:41,1:42:0,105,255
-chr21	41389198	chr21:41389198:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,12:29:146,0,204	0/1:13,12:26:135,0,162	0/0:38,2:43:0,87,255
-chr21	41391006	chr21:41391006:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,16,13:30:255,216,255,255,0,255	0/2:12,3,12:27:130,155,255,0,123,161	0/1:7,16,0:23:219,0,57,255,105,255
-chr21	41391779	chr21:41391779:M	TTTTCTTTTTCTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,22:34:255,0,194	0/1:9,28:37:255,0,137	0/0:36,0:39:0,116,255
-chr21	41400704	chr21:41400704:M	TTTATTTATTTATTTATTT	<3.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,50:50:255,147,0	1/1:0,39:39:255,115,0
-chr21	41401686	chr21:41401686:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:3,30:35:255,49,0	1/1:1,40:41:255,103,0
-chr21	41409237	chr21:41409237:M	ACACACACACACACACACACACATACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:1,40:45:255,113,0	1/1:1,31:33:255,79,0
-chr21	41419783	chr21:41419783:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:6:69,1,0	1/1:0,8:9:141,26,0	1/1:1,7:9:108,9,0
-chr21	41420282	chr21:41420282:M	GGGCGGGGGCGCGGGCGCGGGCGCGGGC	<3.7>,<5.7>	.	.	Motif=GGGCGC	GT:AD:DP:PL	0/1:6,13,0:20:255,0,112,255,113,255	1/2:0,14,10:24:255,177,210,255,0,255	0/2:8,0,4:12:40,74,255,0,147,115
-chr21	41424227	chr21:41424227:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,2,12:25:169,150,255,0,163,129	1/2:0,9,10:20:255,146,116,165,0,111	0/0:29,0,3:32:0,87,255,40,255,255
-chr21	41429905	chr21:41429905:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:13:30,0,204	1/1:0,5:7:139,9,0	0/1:9,11:21:255,0,197
-chr21	41430452	chr21:41430452:M	TGGGAATGGGACTGGG	<2>	.	.	Motif=TGGGAA	GT:AD:DP:PL	0/1:12,4:16:50,0,250	0/0:29,1:30:0,65,255	0/0:35,2:37:0,63,255
-chr21	41431482	chr21:41431482:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,15:42:169,0,255	1/1:2,33:35:255,67,0	0/1:15,19:35:246,0,182
-chr21	41437475	chr21:41437475:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:22:182,0,105	0/0:48,1:49:0,126,255	0/1:13,19:32:255,0,146
-chr21	41442007	chr21:41442007:M	GTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGCGCGTGTGTGTGTG	<26.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,9:20:179,0,217	0/0:18,0:19:0,57,255	0/1:15,3:18:29,0,255
-chr21	41448931	chr21:41448931:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,22,4:26:255,102,37,255,0,255	1/1:0,31,0:31:255,93,0,255,93,255	1/2:0,14,5:20:255,137,97,255,0,255
-chr21	41451835	chr21:41451835:M	AAAAAAAAAAAAAAAAACAAACAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:5:0,11,98	0/1:1,4:7:96,0,11	0/0:9,1:13:0,8,246
-chr21	41462272	chr21:41462272:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:26:255,63,0	1/1:0,15:20:255,53,0	1/1:0,20:21:255,60,0
-chr21	41473915	chr21:41473915:M	GTGAGTGAGGGAGTGAGTGAGGAGTGAGGAGGTGAGGGGGTGAGTG	<12.5>	.	.	Motif=GTGA	GT:AD:DP:PL	0/1:4,6:10:73,0,37	1/1:0,5:5:81,15,0	0/1:5,4:9:41,0,55
-chr21	41483767	chr21:41483767:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,7,8:16:255,126,100,90,0,91	0/2:2,1,10:14:251,164,163,0,19,17	1/2:2,14,9:25:255,122,88,175,0,199
-chr21	41485082	chr21:41485082:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,10,0,3:14:255,45,54,228,83,238,255,0,183,255	1/1:0,30,0,0:31:255,90,0,255,88,255,255,90,255,255	2/3:0,1,10,6:17:255,255,255,108,158,143,255,161,0,255
-chr21	41485653	chr21:41485653:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,13:31:148,0,242	0/0:32,5:37:0,21,255	0/1:13,14:27:173,0,155
-chr21	41495068	chr21:41495068:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,16:34:255,249,195,255,0,224	2/2:1,3,23:27:255,255,255,61,27,0	1/2:0,11,14:25:255,212,179,196,0,125
-chr21	41495627	chr21:41495627:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,8:20:255,127,175,170,0,236	1/2:4,7,5:16:101,26,103,60,0,156	1/1:2,16,0:18:248,17,0,255,48,255
-chr21	41495916	chr21:41495916:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:41:218,0,255	0/0:45,2:50:0,109,255	0/1:16,18:38:222,0,189
-chr21	41501609	chr21:41501609:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,8:10:212,0,0	1/1:0,2:3:70,9,0	1/1:0,13:15:255,42,0
-chr21	41513419	chr21:41513419:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,10:18:246,165,233,112,0,153	0/2:12,1,4:17:20,52,255,0,158,172	0/1:12,15,0:28:199,0,135,255,183,255
-chr21	41517991	chr21:41517991:M	TATATATATATATACATACATATATATATATATATA	<20>,<23>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,9,9:19:255,228,199,199,0,186	0/1:9,5,0:15:77,0,172,114,204,255	1/2:0,7,5:15:255,111,89,154,0,189
-chr21	41518026	chr21:41518026:M	ACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,3:18:30,0,255	0/1:9,4:13:68,0,206	1/1:0,2:2:54,6,0
-chr21	41518038	chr21:41518038:M	ATATATATATATATAATAT	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:23,7:31:4,0,223	0/0:25,0:26:0,72,255	0/1:14,15:31:106,0,119
-chr21	41518474	chr21:41518474:M	ACACACACACACACACACACACACACACACAAACACGCACACACCACA	<21.5>,<25>,<27.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,1:6:103,117,165,27,27,12,89,137,0,134	2/2:1,0,23,0:24:255,255,255,53,72,0,255,255,72,255	1/3:0,7,0,3:11:255,81,58,255,81,255,207,0,208,199
-chr21	41519884	chr21:41519884:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,29,18:48:255,255,255,255,0,255	0/2:16,0,7:23:57,123,255,0,239,218	1/1:2,39,0:44:255,92,0,255,125,255
-chr21	41522527	chr21:41522527:M	TTTTTTTTTTAATTTTCATTTTTATTTT	<4.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/1:16,8:24:107,0,255	0/1:19,19:38:255,0,255	0/0:34,0:34:0,102,255
-chr21	41525941	chr21:41525941:M	AAAAAAAAAAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:30:245,0,111	1/1:0,20:20:255,59,0	0/0:14,0:16:0,44,255
-chr21	41528708	chr21:41528708:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0,3:27:0,71,255,23,255,255	0/2:14,1,12:30:138,160,255,0,244,185	0/1:13,13,1:29:255,0,255,230,216,255
-chr21	41530831	chr21:41530831:M	TGTGTGTGTGTATGCGTGTGCGTGTGTGTGTGTGTATGTGTGTGTGT	<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,11:23:147,0,140	0/1:7,7:14:83,0,83	0/0:22,0:23:0,67,255
-chr21	41531638	chr21:41531638:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,23:32:255,0,126	0/1:16,17:35:255,0,255	1/1:0,43:43:255,129,0
-chr21	41533411	chr21:41533411:M	TAATAATAATAAT	<4>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:18,3:21:0,21,188	0/0:25,2:27:0,50,255	1/1:0,4:6:50,11,0
-chr21	41542198	chr21:41542198:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:117,12,0	0/0:2,0:3:0,9,72	0/1:1,4:7:122,0,10
-chr21	41544227	chr21:41544227:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:18:0,47,255	0/1:9,4:16:68,0,220	0/0:11,0:14:0,36,255
-chr21	41545476	chr21:41545476:M	AGCAAGCAAGCAAGCAAGCAAGCAAG	<8.5>	.	.	Motif=AGCA	GT:AD:DP:PL	0/0:14,0:16:0,42,255	0/0:21,0:21:0,63,255	1/1:0,12:13:255,36,0
-chr21	41545520	chr21:41545520:M	GGAAGGAAGAAAGGGAGGCAGGGAGGAAGGGAAAGGAGGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAGAAGGAAGAAAGGA	<16>	.	.	Motif=GGAA	GT:AD:DP:PL	0/0:1,0:1:0,3,25	0/1:2,4:7:85,0,39	0/1:3,4:7:80,0,53
-chr21	41545610	chr21:41545610:M	GAGGGAGGGAGGGA	<3.8>	.	.	Motif=GAGG	GT:AD:DP:PL	0/1:19,13:32:124,0,223	0/1:13,11:24:114,0,146	1/1:0,22:22:255,64,0
-chr21	41547561	chr21:41547561:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,51,0	1/1:0,21:28:255,69,0	1/1:0,18:21:255,45,0
-chr21	41552908	chr21:41552908:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:24,20:46:255,0,255	0/0:46,0:47:0,138,255
-chr21	41553411	chr21:41553411:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32,0:32:255,96,0,255,95,255	1/2:0,14,11:25:255,169,127,252,0,182	1/1:0,40,0:40:255,120,0,255,118,255
-chr21	41553576	chr21:41553576:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,29:30:255,255,255,88,90,0	1/2:4,9,18:32:255,255,255,98,0,190	2/2:1,0,32:34:255,255,255,82,99,0
-chr21	41554154	chr21:41554154:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTT	<24>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27,0:30:255,89,0,255,89,255	1/2:0,14,16:35:255,255,255,255,0,255	1/1:0,22,0:26:255,77,0,255,77,255
-chr21	41559027	chr21:41559027:M	TAAATAAATAAATAAGTAAATAAATAAATAAATA	<9.5>,<10.5>	.	.	Motif=TAAA	GT:AD:DP:PL	2/2:0,0,23:23:255,255,255,69,68,0	2/2:0,0,18:18:255,255,255,54,53,0	1/2:0,15,11:26:255,206,131,241,0,208
-chr21	41561616	chr21:41561616:M	CTCTCTCTCTCTCTCTCTC	<11.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:1,14:16:255,21,0	1/1:1,20:25:255,42,0	1/1:2,17:22:255,11,0
-chr21	41561634	chr21:41561634:M	CACACACACACACACAGACACACACACACACACACACACACACACACACACACAC	<25.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,5,9:15:198,88,70,70,0,30	0/2:6,1,9:16:76,74,191,0,60,29	0/2:8,4,8:20:86,30,179,0,49,43
-chr21	41562069	chr21:41562069:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:46,1:48:0,123,255	0/0:47,1:49:0,126,255	0/1:14,25:40:255,0,150
-chr21	41564352	chr21:41564352:M	AAAATAAAATAACATAAAATAAAA	<5>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,38:38:255,114,0	1/1:0,30:32:255,91,0	0/1:18,15:33:255,0,255
-chr21	41565091	chr21:41565091:M	TTTTTTTTTGTTTGTTTTTCGTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1:39:0,97,255	0/0:34,0:36:0,105,255	0/1:17,12:29:137,0,228
-chr21	41565853	chr21:41565853:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,38:38:255,112,0	0/1:13,16:29:215,0,159
-chr21	41566112	chr21:41566112:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:28:255,72,0	1/1:0,18:25:255,73,0	0/1:15,6:24:114,0,255
-chr21	41566289	chr21:41566289:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:1,33:36:255,77,0	0/1:20,17:43:255,0,255
-chr21	41570145	chr21:41570145:M	AAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,12,104	0/0:3,0:4:0,12,101	1/1:0,6:6:181,18,0
-chr21	41572988	chr21:41572988:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:1,40:44:255,106,0	0/1:11,21:32:255,0,108
-chr21	41573374	chr21:41573374:M	AAAAAAAAGAAAGAAAGAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:40,0:40:0,118,255	0/1:14,17:31:220,0,166
-chr21	41585357	chr21:41585357:M	ACACAGCACACACACCACACATGCACACCCCACATACACACATACCATACACACACCACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,6:20:240,0,255	0/1:15,2:17:50,0,255	0/1:26,8:34:255,0,255
-chr21	41586087	chr21:41586087:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:10:0,30,255	0/0:8,0:10:0,15,210	1/1:1,7:13:207,4,0
-chr21	41590933	chr21:41590933:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11:27:129,0,182	0/1:8,14:25:202,0,68	0/0:32,1:35:0,84,255
-chr21	41591630	chr21:41591630:M	CCTGTCCCTGTC	<2.2>	.	.	Motif=CCTGTC	GT:AD:DP:PL	0/1:17,8:25:29,0,141	0/0:21,2:23:0,39,235	0/0:13,1:14:0,26,149
-chr21	41591642	chr21:41591642:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,18:22:255,11,0	1/1:1,12:15:196,24,0	1/1:2,11:13:157,3,0
-chr21	41607856	chr21:41607856:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,6:9:84,108,204,0,47,29	1/2:2,3,2:8:45,5,39,31,0,80	1/2:2,7,9:19:202,127,208,93,0,154
-chr21	41608020	chr21:41608020:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,11:13:209,37,0	1/1:1,16:19:255,37,0
-chr21	41618017	chr21:41618017:M	ACACACACACACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,13:33:153,0,255	1/1:0,7:7:127,21,0	0/1:18,9:31:114,0,255
-chr21	41618363	chr21:41618363:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,1:2:11,14,39,0,17,11	0/0:4,0,0:4:0,12,107,12,76,65	1/2:0,6,5:13:226,70,49,109,0,78
-chr21	41619085	chr21:41619085:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	3/3:0,0,1,27:28:255,255,255,255,255,255,81,84,64,0	1/3:1,16,1,7:25:255,173,155,255,100,255,255,0,255,255	2/3:2,0,12,13:27:255,255,255,196,227,154,145,214,0,160
-chr21	41621516	chr21:41621516:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,2:34:0,61,255	0/1:16,11:29:110,0,218	0/0:31,1:32:0,76,255
-chr21	41625239	chr21:41625239:M	TTTGTTTGTTTGCTTGCTTGCTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:1,39:40:255,99,0	1/1:0,29:30:255,87,0	1/1:0,39:39:255,115,0
-chr21	41640303	chr21:41640303:M	TTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<41>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:88,9,0	1/1:0,3:3:88,9,0	1/1:0,3:6:108,13,0
-chr21	41643176	chr21:41643176:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:55,9,0	1/1:0,2:2:34,6,0	0/0:6,0:10:0,10,113
-chr21	41649136	chr21:41649136:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:255,43,0	0/1:4,9:17:125,0,39	1/1:0,22:22:255,65,0
-chr21	41649300	chr21:41649300:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,2:4:35,44,74,0,15,7	1/2:4,4,4:12:44,10,89,10,0,91	1/2:1,2,5:10:102,90,146,20,0,33
-chr21	41649806	chr21:41649806:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:36,0,36	0/1:4,5:9:59,0,42	0/1:3,10:14:133,0,21
-chr21	41655264	chr21:41655264:M	AAATAAATAAATATAAATAAATAAATAAATAAAAAATAAA	<13.2>,<14.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,6,7:13:255,134,98,116,0,78	2/2:0,0,2:4:86,66,60,12,11,0	1/1:0,13,0:13:255,39,0,255,38,246
-chr21	41655940	chr21:41655940:M	CACACACACACACACACACACACACACACAC	<17.5>,<18.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,6,6,0:15:255,100,66,107,0,96,255,107,131,255	2/3:0,1,2,7:12:252,208,200,194,176,192,53,8,0,39	1/3:0,9,0,4:13:255,107,80,255,106,240,238,0,158,231
-chr21	41655976	chr21:41655976:M	AAAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21,0:21:255,63,0,255,62,255	1/2:0,5,3:8:195,51,28,84,0,62	1/2:0,12,5:17:255,88,39,209,0,162
-chr21	41657977	chr21:41657977:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:7:30,0,48	0/0:1,0:2:0,6,27	1/1:0,1:1:16,3,0
-chr21	41661694	chr21:41661694:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:6,0,7:13:158,177,255,0,152,129	0/1:10,12,0:25:255,0,235,255,255,255	1/2:0,10,12:23:255,255,255,255,0,229
-chr21	41672608	chr21:41672608:M	CACACATACACCACACACAGCACTCCCTCACACACACAAACCACACACACACCACAAACACCACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:13,14:27:82,0,255	0/1:14,10:24:44,0,255	0/1:15,9:24:33,0,255
-chr21	41675869	chr21:41675869:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:30:96,0,212	0/0:32,1:34:0,82,255	1/1:0,29:32:255,78,0
-chr21	41675879	chr21:41675879:M	AATAATAATAAT	<2.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:18,8:30:118,0,255	0/0:35,0:39:0,117,255	1/1:0,6:11:166,24,0
-chr21	41676677	chr21:41676677:M	TTTTCTTTTTTCTTTCTTTTTTTTCTTTTTTTTTT	<36>,<38>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17,1:18:255,50,0,255,26,255	0/1:12,8,0:21:77,0,155,137,212,255	2/2:0,0,4:4:109,108,107,12,12,0
-chr21	41679699	chr21:41679699:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:37:206,0,255	0/0:33,0:35:0,102,255	0/1:21,16:39:194,0,255
-chr21	41680430	chr21:41680430:M	AAAAAAAAAAACAAAACAAACAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,17,15:36:255,255,255,255,0,255	0/2:21,1,17:41:255,255,255,0,255,255	0/1:16,16,0:32:200,0,199,255,255,255
-chr21	41693196	chr21:41693196:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8:16:181,0,95	0/0:15,0:17:0,45,255	0/1:9,12:24:255,0,186
-chr21	41713084	chr21:41713084:M	TTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:31:255,0,255	0/1:10,10:24:230,0,227	1/1:0,32:34:255,101,0
-chr21	41723807	chr21:41723807:M	AAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAGAAAAA	<39>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:18:255,35,0	1/1:2,16:18:241,19,0	1/1:2,20:22:255,29,0
-chr21	41725128	chr21:41725128:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:20:0,58,255	0/1:3,3:7:29,0,39	0/0:19,0:19:0,55,255
-chr21	41726444	chr21:41726444:M	TCCTCCTCCCTCTCTCCTTCTTTCTCCTCCTCCTCCTCTTGTTCTTCTTCTTCCTCCTTCCTGCTCCTCCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTC	<15.3>	.	.	Motif=TCC	GT:AD:DP:PL	1/1:0,4:6:163,15,0	1/1:0,1:2:35,3,0	1/1:0,0:2:49,6,0
-chr21	41726591	chr21:41726591:M	CTTCTTCTTCTT	<3>	.	.	Motif=CTT	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,16:19:255,56,0	1/1:0,26:27:255,79,0
-chr21	41728907	chr21:41728907:M	ATGAATGAATGAATGAATGAATGAA	<7.2>	.	.	Motif=ATGA	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:16,14:30:166,0,202	0/0:40,0:40:0,118,255
-chr21	41731772	chr21:41731772:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/1:17,12:29:121,0,207	0/0:47,1:49:0,126,255
-chr21	41736023	chr21:41736023:M	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	<13>,<17>,<45>	.	.	Motif=CTT	GT:AD:DP:PL	1/2:0,15,7,1:24:255,190,150,158,0,255,255,185,255,255	2/3:0,0,11,6:17:255,255,255,63,63,30,255,255,0,255	1/1:3,22,0,0:33:255,53,0,255,78,255,255,95,255,255
-chr21	41736057	chr21:41736057:M	TTATTATTATTATTATTATTATTATTATTATTAATATT	<11.7>,<13.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	2/3:1,0,11,7:19:223,255,255,70,84,31,90,131,0,89	0/3:2,0,1,4:8:71,87,129,36,55,40,0,25,13,26	1/2:2,11,6,1:23:156,56,89,135,0,234,181,62,255,255
-chr21	41749890	chr21:41749890:M	AAAAAAAAAAAAAAAAAAAAGAAAAGAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:4:0,12,69	0/1:5,3:8:27,0,60	0/0:6,1:7:0,3,85
-chr21	41758022	chr21:41758022:M	ATATATATATATATATATATA	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,8:10:230,29,0	1/1:0,0:1:14,3,0	1/1:0,5:7:165,21,0
-chr21	41758042	chr21:41758042:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15.5>,<16.5>,<19.5>	.	.	Motif=AG	GT:AD:DP:PL	2/2:0,1,16,0:17:167,151,148,44,34,0,217,198,51,255	2/3:0,0,1,6:10:99,113,182,110,160,153,5,4,0,2	1/2:0,5,13,0:18:177,96,81,49,0,3,228,134,56,255
-chr21	41777706	chr21:41777706:M	CACACACATCACACACACACACACACACACACACACACACACACAC	<15>,<19>,<20>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,9,7:16:255,255,255,129,129,82,165,165,0,118	1/3:0,11,0,12:25:255,255,255,255,208,255,255,0,255,255	2/2:0,0,22,0:22:255,255,255,66,66,0,255,255,65,255
-chr21	41778783	chr21:41778783:M	TTTTGTTTTTTTTTTTTTTT	<21>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,21,0:24:255,52,0,255,70,255	1/2:2,7,4:16:238,133,133,102,0,255	1/1:4,18,0:25:238,5,0,255,70,255
-chr21	41780812	chr21:41780812:M	AGAAAGAAAGGAAAGGAAGAAAGGAAGGAAAGGAAGAAAGAAAGAAAG	<14>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:4,4:9:76,0,72	0/1:5,8:13:164,0,79	0/0:20,0:20:0,60,255
-chr21	41780859	chr21:41780859:M	GGAGGGAGGGAGGGAG	<1.5>	.	.	Motif=GGAG	GT:AD:DP:PL	0/0:16,1:21:0,26,255	0/1:4,3:8:59,0,86	0/0:39,0:41:0,123,255
-chr21	41780953	chr21:41780953:M	AAGGAAGGAAGGAGGGGAGGGAGGAGAGGGAGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	<14.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/0:0,0:1:0,0,0	.	1/1:0,3:3:67,9,0
-chr21	41781016	chr21:41781016:M	AGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGG	<4.8>,<7.8>,<8.8>,<33.8>	.	.	Motif=AGGG	GT:AD:DP:PL	3/4:0,1,1,2,4:8:70,53,88,49,29,46,43,18,31,35,35,50,11,0,70	1/1:0,6,0,0,1:9:171,17,0,170,18,168,172,18,170,173,161,7,160,162,159	2/3:0,0,4,3,0:7:109,129,212,28,37,16,47,49,0,28,129,221,37,49,246
-chr21	41782244	chr21:41782244:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,28	0/1:2,3:5:64,0,39	0/0:5,0:5:0,15,137
-chr21	41783093	chr21:41783093:M	TTTTTTTTTTTGTTTTTTTTTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,12:24:255,211,255,255,0,255	1/2:0,9,10:22:255,176,224,238,0,196	2/2:0,0,26:27:255,255,255,79,78,0
-chr21	41784640	chr21:41784640:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:15:255,43,0	1/1:1,12:14:201,24,0	1/1:0,20:23:255,66,0
-chr21	41786173	chr21:41786173:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAAA	<41>,<44>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:7:158,75,63,83,0,74	1/2:0,9,5:14:255,117,90,225,0,210	1/1:0,11,0:11:255,33,0,255,33,255
-chr21	41787018	chr21:41787018:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,11,6:18:255,88,55,148,0,156	2/2:1,1,17:20:255,255,255,28,29,0	0/1:9,23,0:32:255,0,65,255,157,255
-chr21	41787320	chr21:41787320:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,14,1,3:20:255,72,40,255,53,255,255,0,255,255	1/2:2,12,7,0:23:255,83,179,255,0,255,255,209,255,255	3/3:0,0,0,6:6:187,187,187,182,182,178,18,18,18,0
-chr21	41790393	chr21:41790393:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:12:104,0,107	0/1:3,4:7:92,0,63	0/0:3,0:6:0,12,94
-chr21	41791048	chr21:41791048:M	TTTTTTTTGTTTGTTTTATTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,29:29:255,85,0	1/1:0,24:25:255,73,0
-chr21	41793165	chr21:41793165:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,6:14:255,117,80,109,0,88	2/2:0,0,18:20:255,255,255,60,58,0	1/1:0,14,1:15:255,44,0,237,26,234
-chr21	41794539	chr21:41794539:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,2:4:82,30,24,35,0,24	0/1:1,3,1:8:85,0,33,46,20,64	2/2:1,0,6:7:88,91,116,3,20,0
-chr21	41797812	chr21:41797812:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:4:28,0,6	0/0:4,0:4:0,12,67	1/1:0,5:8:99,18,0
-chr21	41798025	chr21:41798025:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:30:140,0,191	0/1:22,13:37:129,0,255	0/0:27,1:30:0,69,255
-chr21	41803964	chr21:41803964:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,11:15:157,0,29	0/1:9,12:21:145,0,95	1/1:0,23:27:255,75,0
-chr21	41805703	chr21:41805703:M	CACCACCATCACCACCATAAGCACCACCACCACCA	<45>	.	.	Motif=CAC	GT:AD:DP:PL	0/1:19,10:29:37,0,255	0/1:25,17:42:87,0,255	0/0:17,4:21:0,13,255
-chr21	41805810	chr21:41805810:M	CCATCACCATTACCAACACCATCACCACCAACACAACCACCTCCATCACCATTAACAACACCATCACCA	<4.5>,<10.5>	.	.	Motif=CCATCA	GT:AD:DP:PL	1/2:1,10,4:18:255,35,75,255,0,255	0/1:4,6,0:12:168,0,78,179,46,214	1/2:0,8,5:16:255,57,91,255,0,251
-chr21	41807064	chr21:41807064:M	ACCACCATCTCCACCACTACCTCCACCACCA	<45>	.	.	Motif=ACC	GT:AD:DP:PL	0/0:27,6:33:0,35,255	0/1:17,10:27:26,0,255	0/0:20,4:24:0,29,255
-chr21	41809228	chr21:41809228:M	TTTTTTCTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:20:0,41,255	0/1:6,5:11:53,0,71	0/0:19,0:19:0,56,255
-chr21	41811468	chr21:41811468:M	AAAATAAAATAAAATAAAATAAAATAAAATAA	<5.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:16,8:24:75,0,220	0/0:18,0:18:0,53,255
-chr21	41811681	chr21:41811681:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,8:14:255,144,105,88,0,53	1/2:0,8,5:15:255,86,43,152,0,115	1/1:0,15,0:15:255,45,0,255,44,255
-chr21	41816895	chr21:41816895:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,37:41:255,65,0	1/1:0,24:26:255,75,0	1/1:1,27:30:255,67,0
-chr21	41823030	chr21:41823030:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:21,0,103	0/0:5,0:7:0,17,94	0/1:5,3:8:29,0,63
-chr21	41836425	chr21:41836425:M	CCTGGCCCTGGCCC	<2.5>	.	.	Motif=CCTGGC	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:19,11:30:189,0,255	0/0:30,0:30:0,90,255
-chr21	41840443	chr21:41840443:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:10:93,0,23	0/1:7,4:11:35,0,85	0/1:1,3:5:47,0,3
-chr21	41843951	chr21:41843951:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,5:13:35,71,206,0,93,78	1/2:2,3,4:12:67,42,84,28,0,62	0/0:14,2,0:16:0,17,170,45,176,222
-chr21	41844415	chr21:41844415:M	ACACACACACACACACACACACACACACACACACACACACACACA	<16.5>,<17.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,5:10:194,149,194,75,133,119,133,75,0,119	1/1:0,5,0,0:7:147,14,0,86,14,73,139,5,77,136	0/2:1,0,4,0:6:116,69,83,0,26,12,119,83,15,131
-chr21	41844710	chr21:41844710:M	ACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:4:58,9,0	1/1:0,2:3:37,6,0	1/1:0,0:2:0,0,0
-chr21	41849560	chr21:41849560:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:29:208,0,146	0/1:19,19:39:226,0,218	1/1:0,42:44:255,129,0
-chr21	41863169	chr21:41863169:M	AAAAAGAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:28:46,0,255	0/0:22,0:24:0,59,255	0/1:14,3:18:1,0,202
-chr21	41868038	chr21:41868038:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:33:168,0,203	0/1:10,7:18:77,0,119	1/1:1,17:19:255,38,0
-chr21	41868677	chr21:41868677:M	TTTTCCTTTTTCTTTTTCTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTC	GT:AD:DP:PL	0/0:11,1:12:0,11,250	0/1:6,2:8:24,0,125	1/1:0,10:11:255,32,0
-chr21	41869440	chr21:41869440:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:8:94,5,0	0/1:3,4:7:49,0,31	0/1:7,2:9:9,0,99
-chr21	41874503	chr21:41874503:M	ATATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:1,0,11:12:55,90,252,18,35,0	1/2:0,2,8:13:30,32,142,11,0,13	1/2:0,3,2:6:47,11,27,46,0,52
-chr21	41874526	chr21:41874526:M	TTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:108,12,0	1/1:0,0:4:10,3,0	1/1:0,1:6:105,15,0
-chr21	41886660	chr21:41886660:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,94,0	0/1:20,13:35:134,0,244	1/1:2,39:43:255,90,0
-chr21	41889629	chr21:41889629:M	TTTTTTTTCTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,23:37:255,0,135	0/1:20,21:42:255,0,230	0/0:28,2:32:0,57,255
-chr21	41905311	chr21:41905311:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:72,0,104	0/1:5,6:12:124,0,101	1/1:0,6:6:156,18,0
-chr21	41908244	chr21:41908244:M	TGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/1:8,9:18:208,0,167	0/1:14,8:22:152,0,255
-chr21	41909999	chr21:41909999:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:14:0,39,255	0/1:10,21:33:255,0,193	0/1:13,15:34:255,0,255
-chr21	41911389	chr21:41911389:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/0:6,0:6:0,18,102	0/1:8,3:12:20,0,108
-chr21	41914295	chr21:41914295:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,2:19:0,20,255	0/1:7,13:22:160,0,75	0/1:14,10:27:106,0,189
-chr21	41916665	chr21:41916665:M	ACACACACACACACACACACACACACACACACACACACACAC	<17>,<18>,<20>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,1,27,0:28:255,255,255,84,64,0,255,255,84,255	2/3:0,3,14,9:26:255,255,255,153,189,185,255,187,0,255	1/2:0,14,6,0:20:255,107,48,248,0,190,255,106,248,255
-chr21	41921755	chr21:41921755:M	TGTGTGTGTGTGTAGTGTGTGTGTGTAATGTGTAGTGTGTGTG	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,21:21:255,62,0	0/1:15,13:28:154,0,188	1/1:0,27:27:255,80,0
-chr21	41922150	chr21:41922150:M	TCTTCTTCTTCTTCTT	<3.7>	.	.	Motif=TCT	GT:AD:DP:PL	1/1:0,5:7:134,21,0	0/1:15,3:20:4,0,255	1/1:0,3:5:92,15,0
-chr21	41922164	chr21:41922164:M	TTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,9:14:239,0,23	0/1:19,7:29:125,0,255	1/1:0,13:20:255,6,0
-chr21	41922239	chr21:41922239:M	ACCTCCACCTCC	<2.5>	.	.	Motif=ACCTCC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	0/1:18,15:33:255,0,255	1/1:0,42:42:255,126,0
-chr21	41922477	chr21:41922477:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26,2:29:255,81,0,255,48,255	1/2:0,12,11:24:255,162,124,217,0,153	1/1:0,26,0:27:255,81,0,255,79,255
-chr21	41923000	chr21:41923000:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,3:40:0,62,255	0/1:13,18:31:225,0,137	0/0:28,3:31:0,37,255
-chr21	41928545	chr21:41928545:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,7:8:208,120,98,24,7,0	0/2:0,0,3:5:71,49,61,0,14,2	1/2:0,4,4:8:209,64,41,65,0,41
-chr21	41929103	chr21:41929103:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,10:24:113,0,179	0/0:40,0:44:0,127,255	0/1:19,19:41:222,0,250
-chr21	41931427	chr21:41931427:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	1/1:0,6:6:104,18,0	0/1:13,9:22:95,0,166
-chr21	41933261	chr21:41933261:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	1/1:0,23:23:255,68,0	0/1:15,22:37:255,0,167
-chr21	41934857	chr21:41934857:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:33:255,0,255	0/0:29,0:31:0,90,255	0/1:16,17:35:255,0,255
-chr21	41936816	chr21:41936816:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,145	0/1:1,0:3:17,0,22	0/1:5,7:14:215,0,101
-chr21	41938743	chr21:41938743:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,9:16:135,0,43	0/0:13,2:16:0,12,198	0/1:4,7:13:96,0,42
-chr21	41944522	chr21:41944522:M	AAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,1:4:17,26,65,0,28,23	1/1:1,4,0:7:53,0,0,67,14,116	1/2:1,6,3:11:115,35,57,94,0,155
-chr21	41947113	chr21:41947113:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCTCTC	<33.8>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:0,3:4:26,0,0	1/1:0,4:4:49,11,0	0/1:0,4:6:35,0,2
-chr21	41954912	chr21:41954912:M	GTGTGTGTGGTGTGTGTGTGTGGTGTGTGTGTGTGATGTGT	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/0:16,0:16:0,48,255	0/1:10,11:21:255,0,204
-chr21	41956052	chr21:41956052:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,120,0	1/1:0,15:18:255,50,0	0/1:9,8:17:166,0,193
-chr21	41962113	chr21:41962113:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,79,0	1/1:2,21:23:255,33,0	1/1:1,31:36:255,84,0
-chr21	41968732	chr21:41968732:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:11:198,32,0	0/1:10,3:15:18,0,137	0/1:10,5:16:41,0,139
-chr21	41971967	chr21:41971967:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:37:0,91,255	0/0:40,0:42:0,122,255	0/1:19,13:34:140,0,255
-chr21	41978347	chr21:41978347:M	TTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,151	0/1:5,2:7:14,0,64	0/1:6,4:12:46,0,84
-chr21	41982836	chr21:41982836:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,49:53:255,100,0	1/1:1,37:39:255,97,0	1/1:2,39:43:255,80,0
-chr21	41986007	chr21:41986007:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:8,0,18	0/1:7,4:12:40,0,78	0/0:2,0:3:0,8,43
-chr21	41997576	chr21:41997576:M	AAAAAAAAAAAAAACAAAAAAACAAAAAAACAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:27,1:28:0,65,255	0/1:9,9:21:119,0,109
-chr21	42004005	chr21:42004005:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:21:0,43,255	0/0:18,4:25:0,2,255	0/1:8,8:16:98,0,98
-chr21	42008541	chr21:42008541:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAGAAAAGAAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:128,15,0	0/1:2,2:4:49,0,48	1/1:0,4:5:125,15,0
-chr21	42010439	chr21:42010439:M	GGGCGGGGCGGGGGGGG	<3.2>	.	.	Motif=GGGCG	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,15:15:255,45,0	0/1:8,5:13:62,0,123
-chr21	42011205	chr21:42011205:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:30:255,88,0	0/1:24,16:41:165,0,255	1/1:0,40:41:255,120,0
-chr21	42011707	chr21:42011707:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:35:0,83,255	0/0:26,0:27:0,79,255	0/1:17,17:35:206,0,216
-chr21	42014899	chr21:42014899:M	TTTGTTTTGTTTTGTTTTGTTTTGTTTTTGTTTT	<5.8>	.	.	Motif=TTTGT	GT:AD:DP:PL	1/1:0,37:37:255,110,0	1/1:0,35:35:255,103,0	1/1:0,42:42:255,124,0
-chr21	42015810	chr21:42015810:M	TGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,36:36:255,106,0	0/1:21,24:45:255,0,255
-chr21	42017479	chr21:42017479:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,1,9:12:155,124,144,14,8,0	2/2:4,5,21:30:255,231,255,18,2,0	1/2:0,6,13:20:255,189,168,113,0,58
-chr21	42024967	chr21:42024967:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<18>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,20:34:255,255,255,255,0,255	1/1:0,37,0:39:255,117,0,255,117,255	2/2:0,0,19:23:255,255,255,65,65,0
-chr21	42027690	chr21:42027690:M	TGTGTGTTTGTGGTGTGTGTGTGGTGTGATGTGGCATATGTTGTGTGTTGTGTGGTGTGTGTG	<32>	.	.	Motif=TG	GT:AD:DP:PL	0/0:6,0:8:0,15,50	0/0:7,1:8:0,11,50	0/1:10,5:15:6,0,47
-chr21	42032535	chr21:42032535:M	TTTTTTTTTTGTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:32,1:36:0,86,255	0/1:16,15:31:183,0,200
-chr21	42049131	chr21:42049131:M	CAAAAAAAAAAACAAAAACAAAAACAAAAA	<4.8>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:8,15:23:255,0,110	0/1:17,13:31:204,0,255	0/1:13,15:29:248,0,210
-chr21	42053867	chr21:42053867:M	TTTTTTTTTTTTTTTTGTATTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:26:177,0,255	0/1:11,4:16:71,0,249	0/1:14,5:21:76,0,255
-chr21	42069230	chr21:42069230:M	ACACACACACACACACACACACACACACACACACACACA	<25.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,5:18:111,130,255,0,255,255	0/2:12,0,2:16:40,59,255,0,255,255	0/1:11,5,0:20:112,0,255,151,255,255
-chr21	42072044	chr21:42072044:M	CAAACAAACAAACAAACAAACAAA	<7>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:22,21:46:255,0,255	0/1:25,14:40:136,0,255	0/1:20,15:38:190,0,255
-chr21	42073008	chr21:42073008:M	GTGTGTGTGTGTGTGCGCGCGCGCGTGTGTGTGTGTGCGTGTG	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,13:32:143,0,234	0/1:8,7:15:77,0,94	0/1:21,10:32:92,0,255
-chr21	42077003	chr21:42077003:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<26.5>,<30.5>,<31.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,3,0:11:225,68,53,161,0,152,200,39,161,191	1/3:0,7,0,4:13:243,50,73,243,50,243,203,0,203,192	2/2:0,0,5,0:8:152,156,167,22,20,0,106,103,21,90
-chr21	42092386	chr21:42092386:M	TTTTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:234,0,214	1/1:1,41:42:255,106,0	0/0:38,0:39:0,112,255
-chr21	42104409	chr21:42104409:M	TTTCTTTTCTTTTTTTCTTTTCTTTTTTTTCTTTTTCTTTTCTTTTCTTTTTTTT	<10.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:10,10:20:101,0,101	0/0:9,0:9:0,26,143	0/1:8,10:18:107,0,75
-chr21	42109124	chr21:42109124:M	ACCCCCACCCCC	<1.8>	.	.	Motif=ACCCCC	GT:AD:DP:PL	0/1:18,12:30:220,0,255	0/0:31,0:31:0,93,255	0/1:14,7:21:114,0,255
-chr21	42121369	chr21:42121369:M	GTGTGTGTGTGTGTGTGTGATGTATGTGT	<13.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,21:31:255,255,255,188,0,235	0/1:15,17,0:33:230,0,175,255,229,255	0/2:20,1,6:27:34,94,255,0,255,255
-chr21	42122565	chr21:42122565:M	GTGTGTGCGTGCGTGTGTGCATGTGTGTGCATGTGTGTG	<7.2>	.	.	Motif=GTGT	GT:AD:DP:PL	0/1:14,17:31:255,0,255	0/1:14,16:30:255,0,255	0/0:34,0:34:0,102,255
-chr21	42122633	chr21:42122633:M	GTGTGTGTACGTGTGTGTGCATATGTGTGCGTGTGTGTGTGTGTGTGTG	<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,8:20:81,0,150	0/1:9,10:19:110,0,91	0/0:17,0:17:0,50,255
-chr21	42123481	chr21:42123481:M	GTGTGTGTGTGTGAGTGT	<4>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,10:34:167,0,255	0/1:20,14:36:255,0,255	0/0:43,0:44:0,132,255
-chr21	42130222	chr21:42130222:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<14.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,21,14,0:35:255,255,158,255,0,255,255,221,255,255	1/3:2,16,1,20:39:255,255,255,255,255,255,246,0,255,255	2/3:0,0,22,15:37:255,255,255,255,255,164,255,255,0,255
-chr21	42133889	chr21:42133889:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTCGTTTTGTTTTGTTT	<11.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,19:20:255,57,0	1/1:0,12:12:255,36,0	1/1:0,34:34:255,102,0
-chr21	42134781	chr21:42134781:M	TTTTTTTTTTTTTTATATTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,9:17:255,173,217,128,0,150	1/1:0,24,0:25:255,73,0,255,75,255	1/2:0,11,3:14:215,53,43,197,0,255
-chr21	42138579	chr21:42138579:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,3:32:0,38,255	0/1:13,20:33:255,0,133	0/1:20,14:35:153,0,255
-chr21	42149269	chr21:42149269:M	AAATAAATAAGTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/2:0,0,14:14:255,255,255,41,42,0	1/2:0,6,3:9:199,53,62,156,0,150	1/2:0,9,7:16:255,128,153,234,0,216
-chr21	42161052	chr21:42161052:M	CACAACACACAGACACACAAAGACACGGACAGACACAGATACACACACAGACACACACACACACACACACACACACA	<35.5>,<37.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,16,0:17:255,51,0,255,51,255	1/2:0,7,3:11:233,55,54,178,0,164	1/2:0,6,3:9:200,54,58,153,0,142
-chr21	42161422	chr21:42161422:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,78,0	0/1:6,18:25:255,0,85	0/1:7,12:20:255,0,132
-chr21	42168322	chr21:42168322:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:52,0,11	1/1:0,5:6:94,17,0	1/1:0,4:4:68,12,0
-chr21	42175111	chr21:42175111:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:99,14,0	0/1:3,0:8:17,0,61	0/0:4,0:6:0,4,103
-chr21	42177137	chr21:42177137:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,8:14:208,98,110,60,0,40	0/0:1,0,0:2:0,3,29,3,19,17	1/2:0,0,2:4:38,27,25,9,0,4
-chr21	42185407	chr21:42185407:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,8:11:255,139,108,52,0,20	.	1/2:0,2,3:7:137,51,34,43,0,28
-chr21	42189419	chr21:42189419:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:27,24:51:255,0,255	0/1:17,27:44:255,0,180
-chr21	42192481	chr21:42192481:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:13,17:31:255,0,255	0/1:15,18:33:255,0,255
-chr21	42200597	chr21:42200597:M	TTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:28:0,83,255	0/1:9,5:16:97,0,206	0/0:13,0:16:0,28,255
-chr21	42206352	chr21:42206352:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:32,0:32:0,92,255	0/1:11,4:15:15,0,117	0/1:10,8:18:66,0,97
-chr21	42206874	chr21:42206874:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/1:19,14:34:147,0,245	0/1:19,18:40:223,0,241
-chr21	42210960	chr21:42210960:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:9:122,9,0	0/0:15,2:18:0,7,204	0/1:8,5:14:55,0,96
-chr21	42212706	chr21:42212706:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:4,5:10:109,0,78	0/1:12,6:20:112,0,255
-chr21	42219223	chr21:42219223:M	CCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC	<8.7>	.	.	Motif=CCG	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:13,9:22:189,0,255	0/1:18,18:37:255,0,255
-chr21	42241605	chr21:42241605:M	AAAAAAAAAAAATAACAAAAAAAAAACAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,17:31:255,0,255	0/0:22,0:22:0,66,255	0/1:11,15:28:255,0,213
-chr21	42241821	chr21:42241821:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:27:114,0,209	0/0:24,1:27:0,61,255	0/1:9,14:26:196,0,90
-chr21	42241978	chr21:42241978:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:13:0,29,166	0/1:10,4:15:34,0,122	0/0:7,1:9:0,9,111
-chr21	42243436	chr21:42243436:M	GTGTGTGTGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<24.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,7:18:255,122,152,255,0,243	2/2:0,0,13:16:254,255,255,46,39,0	1/2:0,6,9:15:255,153,214,158,0,128
-chr21	42268363	chr21:42268363:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,10:17:255,255,250,131,0,110	0/2:10,0,11:22:251,255,255,0,226,232	0/1:15,5,0:23:57,0,255,117,255,255
-chr21	42268389	chr21:42268389:M	GCGCGCGCGCGC	<7>	.	.	Motif=GC	GT:AD:DP:PL	1/1:0,12:14:207,40,0	0/1:14,7:25:74,0,142	0/0:21,0:21:0,61,255
-chr21	42270260	chr21:42270260:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:54,0,3	0/1:7,5:13:53,0,77	0/1:8,3:11:18,0,103
-chr21	42296625	chr21:42296625:M	TTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:28:248,255,255,0,243,255	1/2:1,18,16:38:255,255,255,255,0,255	0/1:24,17,0:44:193,0,255,255,255,255
-chr21	42300358	chr21:42300358:M	CACACGCACACACACACATGCACACACACTCACATGGACACACACATACACACACATACACACACATACATGCACACACA	<24>,<25>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,0,4:8:117,54,96,0,53,41	1/1:0,3,0:4:102,9,0,49,8,40	0/1:3,2,1:7:91,0,68,26,66,95
-chr21	42305366	chr21:42305366:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGTTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/1:12,21:33:255,0,120	0/1:16,9:25:95,0,227
-chr21	42320721	chr21:42320721:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,44:45:255,114,0	0/1:19,14:33:158,0,244	1/1:0,36:36:255,106,0
-chr21	42326738	chr21:42326738:M	AAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:37:255,110,0	1/1:0,27:35:255,102,0	1/1:0,33:39:255,114,0
-chr21	42327038	chr21:42327038:M	AAAAAAAAGAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:36:255,105,0	1/1:1,35:37:255,91,0	1/1:0,38:39:255,114,0
-chr21	42341434	chr21:42341434:M	TTTTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:1,7:9:120,9,0	0/1:4,7:11:94,0,39
-chr21	42342753	chr21:42342753:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<18>,<19>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:1,15,0:16:255,28,0,255,47,255	1/2:0,1,1:2:41,17,12,15,0,12	1/2:0,5,5:10:204,89,62,77,0,62
-chr21	42359401	chr21:42359401:M	TTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTT	<78>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:224,27,0	1/1:0,7:7:182,21,0	1/1:0,7:7:183,21,0
-chr21	42362901	chr21:42362901:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,5:9:64,0,38	1/1:1,13:18:245,34,0	0/1:5,5:10:58,0,59
-chr21	42368726	chr21:42368726:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/0:30,0:30:0,88,255	0/1:22,17:39:197,0,255
-chr21	42378871	chr21:42378871:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>,<8.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/2:0,10,14:24:255,255,255,191,0,224	0/2:8,1,6:15:66,90,255,0,105,114	1/2:0,12,5:17:255,93,96,223,0,255
-chr21	42384157	chr21:42384157:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17,0:40:218,0,255,255,255,255	0/2:9,1,14:24:175,225,255,0,115,97	0/1:19,22,1:43:255,0,227,255,255,255
-chr21	42385023	chr21:42385023:M	CCCTCCCTCTCTTCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCCCTTCCTC	<2.2>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:5,3:8:47,0,91	0/1:3,2:5:31,0,55	0/1:4,1:7:8,0,78
-chr21	42387372	chr21:42387372:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/2:16,0,8:25:160,210,255,0,255,255	0/0:16,0,0:16:0,47,255,48,255,255	1/2:1,13,7:22:255,164,141,214,0,255
-chr21	42392561	chr21:42392561:M	ATGAATGAATGA	<4>	.	.	Motif=ATGA	GT:AD:DP:PL	0/1:24,25:49:255,0,255	1/1:0,35:35:255,103,0	0/0:58,0:58:0,171,255
-chr21	42393245	chr21:42393245:M	AAGAAAAAGAAAAAAAAAAAG	<3.3>	.	.	Motif=AAGAAA	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,37:37:255,110,0	1/1:0,43:43:255,128,0
-chr21	42401268	chr21:42401268:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:23:84,0,178	0/1:12,9:23:87,0,157	0/0:14,1:16:0,29,238
-chr21	42401422	chr21:42401422:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:25:186,0,234	0/1:6,5:19:113,0,131	0/0:24,0:26:0,72,255
-chr21	42402099	chr21:42402099:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20:45:255,0,255	0/1:9,12:24:255,0,198	0/0:44,0:45:0,135,255
-chr21	42405984	chr21:42405984:M	GGGGGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:90,9,0	0/0:1,0:1:0,3,30	1/1:0,1:4:43,6,0
-chr21	42408884	chr21:42408884:M	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<14.8>,<15.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/2:0,3,7:10:242,135,107,50,0,29	2/2:0,0,0:1:0,0,0,0,0,0	1/1:0,6,0:6:114,18,0,114,18,114
-chr21	42410779	chr21:42410779:M	CACACACACACACACACAGATAGACACAGAGACACACACATAGCTCACACACATAGACACACACA	<8>,<9>,<31.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,4,0,6:16:70,0,215,63,227,255,9,0,63,70	2/3:3,1,3,4:12:91,56,171,25,137,141,40,30,0,63	0/2:14,0,6,0:20:115,93,255,0,255,255,156,255,218,255
-chr21	42417420	chr21:42417420:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:6:32,0,73	1/1:0,3:4:100,12,0	0/0:4,0:5:0,15,130
-chr21	42417860	chr21:42417860:M	TTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,3:5:70,0,10	1/1:0,1:1:29,3,0	0/0:1,0:1:0,3,30
-chr21	42447788	chr21:42447788:M	ACACACACACACACACACACACACACACAGGCACATACACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23,0:24:255,72,0,255,72,255	0/1:13,7,0:23:164,0,255,195,223,255	1/2:0,3,9:13:215,152,234,84,0,55
-chr21	42450511	chr21:42450511:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:209,3,0	0/1:9,4:14:74,0,197	1/1:0,6:6:161,18,0
-chr21	42458220	chr21:42458220:M	TATTATTATTATTATTATTATTATTATTATTATTA	<8.7>,<12.7>,<15.7>	.	.	Motif=TAT	GT:AD:DP:PL	1/2:0,20,10,0:30:255,190,221,255,0,255,255,255,255,255	1/2:0,13,3,0:16:255,54,45,255,0,255,255,84,255,255	1/3:0,18,0,8:26:255,225,171,255,225,255,255,0,255,255
-chr21	42463782	chr21:42463782:M	AAAAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19,0:34:255,0,255,255,255,255	0/1:6,17,1:32:255,0,143,255,113,255	1/2:1,14,13:33:255,218,255,255,0,255
-chr21	42464909	chr21:42464909:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,1:22:0,19,255	0/0:8,0:14:0,30,244	1/1:0,9:16:238,22,0
-chr21	42466459	chr21:42466459:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:255,36,0	1/1:0,17:21:255,51,0	0/0:0,0:2:0,0,0
-chr21	42470031	chr21:42470031:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1,0:33:0,79,255,97,255,255	0/2:12,1,15:28:184,244,255,0,161,143	0/1:12,17,0:29:227,0,135,255,186,255
-chr21	42473490	chr21:42473490:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:20:255,58,0	1/1:0,18:23:255,64,0	1/1:2,20:28:255,43,0
-chr21	42479727	chr21:42479727:M	ACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,6:19:255,108,54,200,0,182	0/1:14,13,0:28:143,0,171,188,248,255	1/2:0,15,10:25:255,176,105,225,0,194
-chr21	42480641	chr21:42480641:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:23,0,16	0/1:3,3:6:32,0,32	0/0:2,0:2:0,6,34
-chr21	42483990	chr21:42483990:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:30,20:50:238,0,255	0/1:14,16:30:201,0,165	0/1:37,23:60:255,0,255
-chr21	42494705	chr21:42494705:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13,1:29:192,0,150,246,173,255	0/2:5,0,9:14:118,157,255,0,74,47	0/1:17,9,0:26:88,0,235,162,255,255
-chr21	42503249	chr21:42503249:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,7:19:67,0,157	1/1:2,11:14:151,4,0	0/1:9,5:17:38,0,134
-chr21	42512077	chr21:42512077:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:2,36:39:255,79,0	1/1:0,51:52:255,153,0
-chr21	42519958	chr21:42519958:M	GTGTGTTTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:36:0,102,255	0/1:15,16:33:182,0,185	0/0:29,0:31:0,88,255
-chr21	42523898	chr21:42523898:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,20:43:247,0,255	1/1:1,27:29:255,67,0	0/1:13,21:36:255,0,141
-chr21	42530596	chr21:42530596:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<16>,<18>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,9:15:255,255,248,32,27,0	1/2:0,5,4:9:231,99,80,123,0,107	2/2:0,0,7:7:203,196,191,21,21,0
-chr21	42554983	chr21:42554983:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:14:0,40,207	0/1:6,6:13:63,0,49	0/1:14,5:24:11,0,175
-chr21	42557780	chr21:42557780:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,2:32:0,57,255	0/1:24,19:43:208,0,255	0/1:14,25:40:255,0,145
-chr21	42559876	chr21:42559876:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,1,3:15:39,36,193,0,180,255	1/2:0,3,6:9:187,100,76,43,0,25	0/2:11,1,5:17:87,70,217,0,176,255
-chr21	42572678	chr21:42572678:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:19,0,210	0/1:7,5:17:75,0,106	0/0:9,1:12:0,6,166
-chr21	42573340	chr21:42573340:M	TCCCCTCCCCT	<2.4>	.	.	Motif=TCCCC	GT:AD:DP:PL	0/1:24,16:40:255,0,255	0/1:9,16:25:255,0,159	0/1:19,21:40:255,0,255
-chr21	42586020	chr21:42586020:M	TATTATTATTATT	<3.7>	.	.	Motif=TAT	GT:AD:DP:PL	0/0:37,0:38:0,104,255	0/1:8,11:19:80,0,44	0/0:22,0:25:0,66,255
-chr21	42586031	chr21:42586031:M	TTTTTTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,0,21:40:255,255,255,0,255,255	0/1:5,11,0:18:255,0,100,255,133,255	0/2:11,0,11:27:253,255,255,0,255,255
-chr21	42597880	chr21:42597880:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1:20:0,41,255	0/1:13,12:26:131,0,138	0/0:28,1:30:0,70,255
-chr21	42605210	chr21:42605210:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,20:24:255,52,0	0/1:7,4:11:36,0,86	0/1:3,4:7:49,0,32
-chr21	42607028	chr21:42607028:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:72,12,0	1/1:0,10:11:171,29,0	0/1:10,7:19:70,0,134
-chr21	42608302	chr21:42608302:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,41:42:255,105,0	1/1:0,37:37:255,109,0	0/1:18,25:44:255,0,202
-chr21	42608462	chr21:42608462:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAATAAAA	<32>,<34>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:12:47,78,214,0,107,92	0/1:8,4,1:13:31,0,110,51,98,194	0/2:7,0,5:12:53,87,228,0,104,88
-chr21	42611084	chr21:42611084:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:11,6:19:49,0,153	0/0:16,0:18:0,52,255
-chr21	42612545	chr21:42612545:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,49:52:255,134,0	1/1:0,35:36:255,106,0	1/1:1,47:48:255,123,0
-chr21	42615907	chr21:42615907:M	CACACACAAATACACATACACCACACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,27:48:186,0,255	0/0:26,7:33:0,14,255	0/1:17,24:41:169,0,255
-chr21	42615966	chr21:42615966:M	ACACACACCACGCACCACCCCCACAGCACACAGAAACACATACACACCACACACACA	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,26:45:187,0,255	0/1:18,7:25:11,0,255	0/1:11,24:35:192,0,196
-chr21	42625228	chr21:42625228:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:2,27:31:255,53,0	1/1:0,29:29:255,85,0
-chr21	42639292	chr21:42639292:M	ACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/0:48,0:48:0,132,255	0/0:42,0:43:0,114,255	0/1:17,19:40:137,0,98
-chr21	42643307	chr21:42643307:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:29:255,65,0	1/1:3,27:31:255,38,0	1/1:0,41:45:255,131,0
-chr21	42648271	chr21:42648271:M	TTTTCTTTTTGTTTTTGTTTTTGTTTTTTTTTTT	<35>,<37>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,5:22:255,128,76,255,0,255	1/1:0,20,0:20:255,59,0,255,60,255	2/2:0,0,17:19:255,255,255,56,56,0
-chr21	42661035	chr21:42661035:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:22:49,0,255	0/1:17,10:31:205,0,255	0/0:30,0:33:0,95,255
-chr21	42670311	chr21:42670311:M	ACACCACACTCACATTCACAC	<4.5>	.	.	Motif=ACACTC	GT:AD:DP:PL	0/1:19,9:34:73,0,252	0/1:22,8:33:45,0,255	0/0:41,0:42:0,120,255
-chr21	42674317	chr21:42674317:M	TTTTTTTTTTTTTTTTT	<18>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,6:20:138,157,255,0,190,255	1/1:0,7,0:9:124,22,0,123,3,191	0/1:8,7,0:17:80,0,101,125,144,255
-chr21	42684983	chr21:42684983:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,25:45:255,0,243	0/1:28,12:43:139,0,255	0/0:42,0:42:0,124,255
-chr21	42693300	chr21:42693300:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,5:16:59,0,119	0/0:11,1:12:0,18,173	0/1:9,8:17:93,0,111
-chr21	42693962	chr21:42693962:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:222,0,255	0/1:21,22:43:255,0,247	0/0:43,0:43:0,127,255
-chr21	42701431	chr21:42701431:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:44:244,0,255	0/0:31,2:34:0,64,255	0/1:16,23:41:255,0,190
-chr21	42704434	chr21:42704434:M	ACACACACACACACACACACACACACACACACACACA	<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,9,4:16:219,88,76,140,0,227	0/2:9,0,3:15:53,84,226,0,167,242	0/1:10,8,0:20:81,0,137,138,189,255
-chr21	42710409	chr21:42710409:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:32:222,0,132	0/1:7,8:17:97,0,79	0/0:17,1:18:0,35,255
-chr21	42711254	chr21:42711254:M	TTTTGTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:21:12,0,230	0/1:9,15:27:199,0,87	0/0:34,0:36:0,105,255
-chr21	42713130	chr21:42713130:M	TTGTTTTTGTTTTTGTTTTTGTTTT	<5.2>	.	.	Motif=TTGTTT	GT:AD:DP:PL	0/1:24,22:46:255,0,255	0/1:18,10:28:99,0,245	0/0:36,0:36:0,106,255
-chr21	42714017	chr21:42714017:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,12:19:185,0,24	0/1:6,3:9:25,0,74	0/0:15,0:18:0,39,255
-chr21	42715189	chr21:42715189:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:109,18,0	0/1:3,3:7:42,0,31	0/1:6,5:14:51,0,81
-chr21	42717295	chr21:42717295:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:7:50,0,3,61,15,102	0/2:1,0,3:6:39,49,88,0,13,5	0/1:2,4,0:6:52,0,17,69,29,135
-chr21	42717544	chr21:42717544:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,75,0	0/1:17,14:35:255,0,255	0/1:29,11:43:174,0,255
-chr21	42717901	chr21:42717901:M	GTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTT	<11.5>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	0/1:16,14:30:255,0,255	0/1:14,7:21:126,0,255
-chr21	42719640	chr21:42719640:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:5,15:22:255,0,73	1/1:0,14:16:255,42,0
-chr21	42721972	chr21:42721972:M	TTTTTCTTTTCTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:32:255,94,0	0/1:13,18:32:235,0,137	0/1:15,26:41:255,0,154
-chr21	42726594	chr21:42726594:M	ATATATATATATATATATATATATATATATAT	<11.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,5,3:8:126,11,60,119,0,115	1/1:0,2,0:4:51,5,0,50,2,48	0/2:2,0,2:6:4,19,121,0,15,0
-chr21	42726625	chr21:42726625:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:96,5,0	.	1/1:0,0:3:37,8,0
-chr21	42727078	chr21:42727078:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:5:92,0,16	0/1:0,1:3:20,0,19	0/0:3,0:5:0,15,117
-chr21	42727490	chr21:42727490:M	TTTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:254,30,0	1/1:0,9:9:252,27,0	.
-chr21	42729000	chr21:42729000:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:11:56,0,73	0/1:9,5:14:43,0,110	0/0:32,1:35:0,82,255
-chr21	42740444	chr21:42740444:M	AAAAAAAAAAAAAGAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,23:37:255,0,144	0/1:11,13:25:159,0,115	0/1:10,12:23:153,0,109
-chr21	42740574	chr21:42740574:M	GATGGATGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAATGGATACATAGATGAATGGATGGAT	<15.8>,<16.8>	.	.	Motif=GATG	GT:AD:DP:PL	1/2:0,9,7:16:255,114,68,146,0,101	1/2:0,3,5:10:198,81,58,49,0,26	1/2:0,6,3:11:226,48,23,98,0,72
-chr21	42740705	chr21:42740705:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAACAGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<12.5>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:0,1:1:37,3,0	.	1/1:0,4:4:152,12,0
-chr21	42751745	chr21:42751745:M	TTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:137,17,0	1/1:0,8:9:206,24,0	1/1:0,5:6:130,15,0
-chr21	42754187	chr21:42754187:M	AAAAAAAAAAACAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,14:35:155,0,255	0/1:25,19:45:210,0,255	1/1:0,49:50:255,147,0
-chr21	42759383	chr21:42759383:M	GTGTGTGTGTGTGTGGGAGCGTGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,7:11:184,0,75	0/1:8,6:16:141,0,174	0/0:27,0:27:0,81,255
-chr21	42768125	chr21:42768125:M	AGCAGCAGCAGCAG	<4.3>	.	.	Motif=AGC	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,25:25:255,75,0	1/1:0,27:27:255,81,0
-chr21	42769549	chr21:42769549:M	CACACACAGGCACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:1,3:5:97,0,23	0/1:3,4:7:117,0,83	1/1:0,14:14:255,42,0
-chr21	42774882	chr21:42774882:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3:17:40,0,255	0/1:1,5:9:145,0,16	0/0:8,0:13:0,38,255
-chr21	42776849	chr21:42776849:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:10:111,0,80	0/0:14,0:15:0,44,255	1/1:0,15:17:255,50,0
-chr21	42780026	chr21:42780026:M	TCTCTCTCTCTCTCTCTCGCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:14,24:38:255,0,255	0/0:35,0:37:0,105,255
-chr21	42780166	chr21:42780166:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:49,1:51:0,131,255	0/0:37,1:38:0,94,255	0/1:26,13:42:123,0,255
-chr21	42780416	chr21:42780416:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/1:12,17:29:215,0,126	0/0:32,1:34:0,81,255
-chr21	42787797	chr21:42787797:M	ATTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<13.8>,<14.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,7,0:17:163,0,237,125,255,255	0/1:3,3,0:6:74,0,67,51,78,122	0/2:7,0,6:13:157,106,255,0,182,168
-chr21	42788160	chr21:42788160:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:32:83,0,255	0/1:16,16:32:188,0,188	0/0:23,3:26:0,22,255
-chr21	42788306	chr21:42788306:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:23:96,0,188	0/1:10,12:22:142,0,109	0/1:12,9:24:111,0,147
-chr21	42795971	chr21:42795971:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:6:0,4,58	0/1:2,3:7:50,0,13	0/1:4,2:6:16,0,50
-chr21	42798803	chr21:42798803:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:12:92,0,47	0/1:12,4:18:17,0,173	1/1:2,23:25:255,38,0
-chr21	42800401	chr21:42800401:M	TGGTGGTGGTGGTGGTGGTGGTGGTGGTG	<7.7>	.	.	Motif=TGG	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,31:31:255,93,0	1/1:0,35:35:255,105,0
-chr21	42809780	chr21:42809780:M	CACATGCACAGGTACACATGCACAGGCACATACATGCACA	<5.3>	.	.	Motif=CACATG	GT:AD:DP:PL	0/1:19,4:23:2,0,255	0/0:24,2:26:0,43,255	0/1:18,6:24:34,0,247
-chr21	42809815	chr21:42809815:M	GCACACACACAGGCACACACTCGCACACGCACAGGCACGCACGCACACTCACATGCACACACGCACAAGCACAC	<8.7>	.	.	Motif=GCACAC	GT:AD:DP:PL	0/1:3,14:17:255,0,31	1/1:0,18:19:255,54,0	0/1:5,11:17:255,0,74
-chr21	42811264	chr21:42811264:M	TTTTTTTTAATTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,7:13:94,0,56	0/1:4,14:19:201,0,14	0/0:16,1:18:0,35,255
-chr21	42822490	chr21:42822490:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,5:27:11,0,255	0/1:17,10:29:110,0,207	0/0:31,3:35:0,49,255
-chr21	42824262	chr21:42824262:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,2:39:0,80,255	0/1:26,19:46:172,0,255	0/0:33,1:36:0,88,255
-chr21	42824756	chr21:42824756:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,13:27:151,0,153	1/1:2,11:14:159,7,0	0/1:8,13:23:177,0,72
-chr21	42824772	chr21:42824772:M	AAAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAGAGAGAAAGAGATAGAAAAAAAAGAAAAGAGAGAGAAAGAA	<18>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:1,1:4:17,0,10	0/1:2,3:5:40,0,22	0/0:7,0:7:0,21,129
-chr21	42824865	chr21:42824865:M	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	<8.5>,<12.5>	.	.	Motif=AGGA	GT:AD:DP:PL	0/2:5,0,14:21:255,255,255,0,73,101	0/0:18,0,0:18:0,50,227,54,255,255	1/2:1,14,10:27:255,227,210,157,0,255
-chr21	42827446	chr21:42827446:M	ATAGATAGATAGATAGATAGAT	<6.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,42:42:255,124,0	1/1:0,40:42:255,118,0
-chr21	42828695	chr21:42828695:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,35:36:255,105,0	1/1:0,35:38:255,108,0
-chr21	42830326	chr21:42830326:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,18:27:233,0,77	0/1:10,9:20:100,0,107	0/0:33,1:35:0,85,255
-chr21	42831402	chr21:42831402:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,11:21:234,165,255,88,0,130	1/1:0,13,1:15:226,34,0,247,18,255	1/2:1,7,13:22:255,217,255,105,0,131
-chr21	42832171	chr21:42832171:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,14:15:255,236,233,44,26,0	0/2:2,1,5:8:72,54,100,0,17,11	1/2:1,7,12:21:255,159,162,105,0,65
-chr21	42833820	chr21:42833820:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:25:0,65,255	0/1:10,7:23:58,0,145	0/1:17,5:24:16,0,225
-chr21	42836036	chr21:42836036:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,3:48:0,86,255	0/1:16,30:50:255,0,149	0/0:37,1:38:0,94,255
-chr21	42840650	chr21:42840650:M	TGTGTGCGTATGTGGTGTGGTGTGTGTAGTGTAATGTGTGGTGTGTATGTG	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,18:26:255,0,139	0/1:13,12:25:255,0,255	0/1:12,17:29:255,0,236
-chr21	42843407	chr21:42843407:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,14	1/1:0,0:5:29,6,0	1/1:0,4:4:124,12,0
-chr21	42847038	chr21:42847038:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,43:43:255,126,0	1/1:0,49:49:255,145,0
-chr21	42848344	chr21:42848344:M	CACACACACACA	<5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:13,7:20:68,0,175	0/0:42,0:42:0,124,255
-chr21	42849095	chr21:42849095:M	CACACACACACACA	<5>,<8>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,1:8:255,20,10,255,0,255	2/2:0,0,7:7:130,151,255,21,21,0	1/1:0,7,0:7:255,21,0,255,21,255
-chr21	42852916	chr21:42852916:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:21:106,0,143	1/1:2,19:22:255,20,0	0/1:13,12:27:154,0,156
-chr21	42855128	chr21:42855128:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:14:95,0,67	0/1:6,21:28:255,0,21	0/1:13,13:30:162,0,161
-chr21	42864108	chr21:42864108:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAA	<18>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0,0:1:0,3,28,3,20,17	1/1:0,6,0:7:179,21,0,179,21,179	2/2:0,0,3:3:49,57,80,9,9,0
-chr21	42870014	chr21:42870014:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,44,255	0/1:10,11:21:127,0,111	0/0:24,0:24:0,70,255
-chr21	42871991	chr21:42871991:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:223,0,255	1/1:0,33:33:255,97,0	0/1:11,16:27:217,0,124
-chr21	42876824	chr21:42876824:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/1:18,21:39:255,0,206	0/0:44,0:44:0,130,255
-chr21	42877139	chr21:42877139:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:5:32,0,21	1/1:0,7:7:117,20,0	0/1:2,1:4:15,0,23
-chr21	42877473	chr21:42877473:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:17,1,11:30:115,170,255,0,234,236	0/1:3,17,2:25:238,0,5,255,2,255	0/0:22,2,2:26:0,40,255,40,255,255
-chr21	42878042	chr21:42878042:M	AAAAAAAAAAAAAAAGAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,2:13:0,2,152	1/1:1,14:15:221,27,0	0/1:7,5:14:47,0,100
-chr21	42880935	chr21:42880935:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:23:118,0,175	1/1:1,10:14:191,23,0	0/1:13,9:24:94,0,186
-chr21	42881399	chr21:42881399:M	GTTTGTTTGTTTGTTTGTTT	<4>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:20,18:38:215,0,252	0/0:35,0:35:0,103,255
-chr21	42883275	chr21:42883275:M	AAAAAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:13:104,0,35	1/1:0,16:16:255,47,0	0/1:10,4:15:26,0,141
-chr21	42883315	chr21:42883315:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:16:0,29,243	0/0:16,1:18:0,35,255	0/1:6,14:20:187,0,47
-chr21	42887295	chr21:42887295:M	TTTTTTTTTTTTTTTTTTTTATTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:16:0,28,229	0/1:13,5:18:32,0,167	0/1:17,4:21:8,0,233
-chr21	42892254	chr21:42892254:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,13,0:21:255,0,167,232,143,255	1/2:0,16,12:30:255,173,120,255,0,211	0/1:10,16,1:28:255,0,202,255,159,255
-chr21	42895979	chr21:42895979:M	TTTTTCTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,4:18:28,0,167	0/1:2,2:5:28,0,20	0/1:13,6:20:56,0,172
-chr21	42896152	chr21:42896152:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,0,4,0:10:87,69,222,0,163,152,69,219,160,216	1/2:0,4,1,0:5:132,17,2,67,0,53,120,14,66,115	0/3:2,0,0,6:8:147,153,207,102,156,140,0,53,53,34
-chr21	42897407	chr21:42897407:M	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<6.4>	.	.	Motif=TTTGT	GT:AD:DP:PL	0/1:12,13:25:178,0,158	1/1:0,28:28:255,82,0	0/0:33,0:33:0,97,255
-chr21	42899439	chr21:42899439:M	TTTTTTGTTTTTTTGTTTTGTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:25:138,0,197	1/1:0,33:33:255,97,0	0/1:13,16:29:215,0,159
-chr21	42904492	chr21:42904492:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,1:7:0,2,90	0/1:3,6:9:77,0,25	0/1:9,3:14:25,0,121
-chr21	42905864	chr21:42905864:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,9,0:17:206,0,174,162,143,255	1/1:0,24,1:27:255,75,0,255,59,255	0/2:14,3,12:30:165,119,255,0,185,167
-chr21	42907449	chr21:42907449:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4,1:13:91,0,171,64,110,157	1/1:1,9,0:12:254,8,0,178,24,167	0/2:9,0,7:16:78,105,255,0,158,113
-chr21	42909137	chr21:42909137:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,4:8:50,0,31	1/1:0,0:2:22,5,0	0/1:1,1:3:8,0,21
-chr21	42912892	chr21:42912892:M	AAAAAAAAAAAACAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/1:7,8:15:94,0,77	0/0:21,0:21:0,62,255
-chr21	42914286	chr21:42914286:M	AAAAAAAAAAAAAAGAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,17:23:246,0,43	1/1:1,27:29:255,68,0	0/1:14,11:26:122,0,184
-chr21	42924949	chr21:42924949:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,1,4:18:61,56,240,0,212,255	1/2:0,2,9:11:255,156,126,30,0,3	0/1:14,12,1:27:148,0,176,166,233,255
-chr21	42926241	chr21:42926241:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,17:35:216,0,236	1/1:0,29:29:255,85,0	0/1:21,12:33:123,0,255
-chr21	42928557	chr21:42928557:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAA	<39>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0,0:4:0,12,114,12,114,114	1/2:0,3,2:5:123,34,19,50,0,36	0/2:5,1,3:9:66,34,147,0,107,113
-chr21	42929186	chr21:42929186:M	TTTCTTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTTTTTC	<15>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:13,6:19:90,0,255	0/1:2,17:20:255,0,3	0/1:15,7:22:106,0,255
-chr21	42933401	chr21:42933401:M	AAAGAGAGAAGAAAAAGAGAAAGAGA	<4.5>	.	.	Motif=AAAGAG	GT:AD:DP:PL	0/1:21,19:40:255,0,255	1/1:0,32:32:255,96,0	0/1:24,21:45:255,0,255
-chr21	42933679	chr21:42933679:M	AAAAAAAAGTAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:9:25,0,76	.	0/0:14,2:17:0,7,191
-chr21	42939258	chr21:42939258:M	TTTTTTGTTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:4:80,11,0	1/1:0,2:3:71,9,0	1/1:0,4:5:129,15,0
-chr21	42948050	chr21:42948050:M	TTTTTTTTTTTTTT	<11>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:25,0,22:49:255,255,255,0,255,255	0/2:19,0,20:41:242,255,255,0,255,225	1/2:1,18,14:37:255,250,255,255,0,255
-chr21	42956741	chr21:42956741:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,6:10:74,0,33	1/1:1,14:17:235,33,0	1/1:1,4:8:74,4,0
-chr21	42958065	chr21:42958065:M	GAGAGAGAGAGAGA	<8>	.	.	Motif=GA	GT:AD:DP:PL	0/1:9,12:21:170,0,110	0/1:13,14:27:172,0,156	0/0:24,0:24:0,71,255
-chr21	42958896	chr21:42958896:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:26:250,0,255	0/1:6,4:14:72,0,139	0/0:30,0:32:0,95,255
-chr21	42959404	chr21:42959404:M	ATTATTATTATTATTATTATTATTCTTATT	<9.7>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:9,8:26:20,2,0	0/1:15,9:33:14,0,9	0/0:22,5:35:0,5,37
-chr21	42960020	chr21:42960020:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:34:255,96,0	1/1:0,24:27:255,78,0	1/1:2,31:37:255,70,0
-chr21	42962840	chr21:42962840:M	TTTTCTTTTCTTTTCTTTTCT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:7,6:13:76,0,95	0/1:9,6:15:63,0,118	0/0:19,0:19:0,56,255
-chr21	42966421	chr21:42966421:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:23:145,0,135	0/1:12,3:15:8,0,165	1/1:1,23:24:255,53,0
-chr21	42966775	chr21:42966775:M	TTTTTTTTTTTTTTTTTT	<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,3:11:187,36,65,143,0,151	0/1:2,11,2:17:255,0,30,255,0,255	2/2:1,0,10:13:163,196,255,11,35,0
-chr21	42969908	chr21:42969908:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:24:255,46,0	1/1:0,13:13:223,38,0	1/1:1,20:22:255,46,0
-chr21	42975046	chr21:42975046:M	GCGGGGCGGGG	<3.4>	.	.	Motif=GCGGG	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,12:12:255,36,0	1/1:0,16:16:255,48,0
-chr21	42977538	chr21:42977538:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:81,9,0	1/1:0,3:5:84,5,0	1/1:0,1:1:27,3,0
-chr21	42978469	chr21:42978469:M	TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:17:130,0,195	0/1:4,2:8:31,0,108	0/1:7,4:14:97,0,153
-chr21	42982732	chr21:42982732:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,5:19:255,88,34,210,0,195	1/2:1,15,5:21:255,67,24,195,0,206	1/2:2,6,5:14:182,59,57,53,0,86
-chr21	42984066	chr21:42984066:M	GTGTGTGCGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,23:24:255,71,0	1/1:0,23:23:255,69,0	1/1:0,27:27:255,81,0
-chr21	42984965	chr21:42984965:M	TTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:60,11,0	.	1/1:0,0:1:10,3,0
-chr21	42986003	chr21:42986003:M	AAAAAAAAAAAAAAATTAAAAAAAAAA	<29>,<30>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,9,7:16:255,126,80,161,0,117	1/2:0,14,7:21:255,120,59,239,0,180	1/1:0,10,0:11:255,30,0,207,32,189
-chr21	42987383	chr21:42987383:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:65,8,0	.	1/1:0,3:7:121,5,0
-chr21	42987405	chr21:42987405:M	ATATATATATATATATATATATATGTATA	<13>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,4:12:86,0,104	0/0:8,0:9:0,26,213	0/1:7,3:12:50,0,156
-chr21	42987619	chr21:42987619:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:17:233,13,0	1/1:0,8:9:141,24,0	0/1:7,3:10:25,0,97
-chr21	42988049	chr21:42988049:M	TTTTTGTTTTTGTTTTTGTTTTTG	<3.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	1/1:0,9:9:232,27,0	1/1:0,11:11:255,33,0	1/1:0,2:2:52,6,0
-chr21	42990097	chr21:42990097:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:4,23:28:255,12,0	1/1:2,28:30:255,52,0
-chr21	42991734	chr21:42991734:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:1,21:22:255,47,0	1/1:1,32:36:255,87,0
-chr21	42993651	chr21:42993651:M	TTTTTTTTGTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,6:10:255,109,80,73,0,44	1/2:0,6,7:14:255,121,81,115,0,76	1/2:0,14,1:21:255,70,20,255,0,201
-chr21	42993726	chr21:42993726:M	TTTTTTTTTCTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,10:28:255,182,102,255,0,233	1/2:0,10,5:17:255,87,37,200,0,154	1/2:0,10,6:19:255,108,53,216,0,166
-chr21	42994032	chr21:42994032:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:1,1,0	0/1:1,2:6:59,0,17	1/1:0,3:3:86,9,0
-chr21	42994892	chr21:42994892:M	TTTCTTTTCTTTTCTTTTTCTTTCTTCTTTTTTTTTTTTTTTTTTTT	<7.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	1/1:0,4:7:94,6,0	0/1:1,2:5:39,0,24	0/1:1,2:4:41,0,18
-chr21	42996892	chr21:42996892:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20:22:255,27,0	1/1:2,30:33:255,52,0	0/1:23,21:44:254,0,255
-chr21	42999475	chr21:42999475:M	TTTTCTTTTCTTTTTTTTTCTTTT	<3.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:10,0:10:0,30,193	0/0:14,0:14:0,41,253	1/1:0,22:22:255,65,0
-chr21	43001961	chr21:43001961:M	AAATAAATAAATAAATAAATAAATAAA	<6.2>,<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:1,4,34:53:255,255,255,92,0,37	1/2:1,9,17:36:255,144,255,173,0,181	1/2:0,4,26:40:255,235,255,126,0,84
-chr21	43005535	chr21:43005535:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,26:28:255,63,0	1/1:1,37:41:255,102,0	0/1:16,20:36:255,0,188
-chr21	43008062	chr21:43008062:M	CACACACACACACACACACACACACACACACACACA	<16>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,27,0:28:255,81,0,255,84,255	1/1:0,16,0:24:255,51,0,255,41,255	1/2:0,14,11:28:255,255,255,255,0,255
-chr21	43009611	chr21:43009611:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:35,6,0	0/1:1,3:6:44,0,11	0/1:0,1:3:12,0,5
-chr21	43011067	chr21:43011067:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:7:79,2,0	1/1:1,4:6:62,0,0	1/1:0,11:12:204,35,0
-chr21	43019085	chr21:43019085:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:25:144,0,146	0/1:7,11:18:137,0,68	0/1:6,9:16:116,0,62
-chr21	43019926	chr21:43019926:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,2:5:138,36,21,54,0,39	1/2:0,3,0:6:86,0,7,55,0,46	2/2:0,0,5:6:154,88,71,17,1,0
-chr21	43023630	chr21:43023630:M	TTTTTTTTTTTTATTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14:30:187,0,177	0/1:15,18:33:224,0,171	0/1:13,19:32:255,0,146
-chr21	43028450	chr21:43028450:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,16:32:255,255,255,255,0,255	1/2:1,13,26:40:255,255,255,213,0,255	1/2:4,23,21:48:255,255,255,255,0,255
-chr21	43029396	chr21:43029396:M	TTTTTATTTTTTTTTATTTGTTTGCTTTGTTTTTTTTTTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:10:193,26,0	1/1:0,3:5:105,14,0	1/1:0,10:12:255,36,0
-chr21	43030261	chr21:43030261:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTG	<17.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,8,9:17:255,235,211,211,0,184	1/2:0,12,11:23:255,255,253,255,0,255	1/2:0,18,16:36:255,255,255,255,0,255
-chr21	43034832	chr21:43034832:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:30:220,0,138	0/1:26,11:37:84,0,255	0/1:24,22:46:255,0,255
-chr21	43035876	chr21:43035876:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAA	<15.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,3:5:91,9,0	1/1:0,2:3:62,6,0	1/1:0,0:2:11,3,0
-chr21	43052881	chr21:43052881:M	AAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:12:206,0,37	0/1:2,4:8:108,0,46	0/0:0,0:1:0,0,1
-chr21	43053773	chr21:43053773:M	GCCAGGCCAGGC	<1.4>	.	.	Motif=GCCAG	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:19,0:19:0,56,255	0/1:11,7:18:79,0,154
-chr21	43061241	chr21:43061241:M	TTTTCTTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:19:168,0,74	0/1:3,6:11:74,0,42	0/0:18,0:18:0,53,255
-chr21	43061415	chr21:43061415:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:8:0,23,128	0/1:1,1:3:9,0,19	0/1:10,4:14:30,0,137
-chr21	43151297	chr21:43151297:M	CATCCATCCATCCATCCATCCATCCATCCATCCATCCAT	<10.8>	.	.	Motif=CATC	GT:AD:DP:PL	0/0:19,0:19:0,56,255	1/1:0,10:10:183,29,0	0/1:19,13:32:152,0,255
-chr21	43153264	chr21:43153264:M	TTTTTCGTTTTTGTTTTTGTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:4,3:8:33,0,52	0/0:5,0:5:0,15,91	0/1:3,1:4:6,0,43
-chr21	43164478	chr21:43164478:M	TTTTTTTTTTTTTTCTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,14,84	0/0:21,2:25:0,38,255	0/1:1,8:11:112,0,7
-chr21	43167835	chr21:43167835:M	AATAATAATAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:14,0:14:0,42,255	0/0:15,0:15:0,45,255	0/1:7,9:16:214,0,148
-chr21	43179973	chr21:43179973:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:9,5:14:51,0,122	0/0:19,0:19:0,56,255
-chr21	43180141	chr21:43180141:M	TGTGTGTGTGTGTGTGGGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:7,0:7:0,21,134	0/0:16,0:16:0,47,255	1/1:0,3:3:56,9,0
-chr21	43184262	chr21:43184262:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:14:51,0,124	0/0:15,0:15:0,44,255	1/1:0,21:21:255,62,0
-chr21	43189691	chr21:43189691:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,35:38:255,76,0	1/1:1,24:25:255,56,0	0/1:16,15:32:171,0,188
-chr21	43190666	chr21:43190666:M	TTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,21:34:255,255,255,218,0,255	2/2:0,0,24:27:255,255,255,80,75,0	1/1:1,40,0:41:255,103,0,255,123,255
-chr21	43196331	chr21:43196331:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:2,31:34:255,53,0	0/1:21,27:49:255,0,240
-chr21	43198012	chr21:43198012:M	AAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:143,0,182	0/0:30,1:32:0,76,255	0/1:16,11:27:118,0,209
-chr21	43294100	chr21:43294100:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,14:23:255,255,191,165,0,99	0/2:13,1,10:25:243,164,255,0,255,255	1/1:0,32,0:33:255,96,0,255,97,255
-chr21	43298612	chr21:43298612:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,35:36:255,87,0	0/1:24,18:42:203,0,255	1/1:0,35:35:255,103,0
-chr21	43351329	chr21:43351329:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>,<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,12,0,0:29:255,217,131,255,0,217,255,182,255,255,255,216,255,255,255	1/3:0,13,1,13,0:27:255,255,255,255,205,255,255,0,205,255,255,223,255,255,255	2/4:0,1,11,0,8:20:255,255,255,230,211,187,255,255,139,255,255,174,0,203,255
-chr21	43357368	chr21:43357368:M	AATAATAATAATAATAATAATAATAATAATAATAATAATAA	<10.7>,<16.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:11,17,0:28:255,0,240,255,255,255	1/1:0,22,0:22:255,66,0,255,66,255	0/2:11,0,9:20:214,247,255,0,255,255
-chr21	43360515	chr21:43360515:M	GTGTGTGTGTGTG	<5.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,11:22:157,0,129	1/1:0,30:30:255,88,0	0/0:33,0:33:0,97,255
-chr21	43368635	chr21:43368635:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,22:45:255,0,255	0/1:21,19:40:220,0,255	0/0:49,0:49:0,144,255
-chr21	43369104	chr21:43369104:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,25:47:255,0,255	0/1:14,13:27:154,0,171	0/0:43,3:47:0,83,255
-chr21	43377297	chr21:43377297:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:75,14,0	0/0:11,0:12:0,35,184	1/1:3,16:20:222,9,0
-chr21	43405254	chr21:43405254:M	TATATATATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:5,0:5:0,15,81	1/1:0,7:9:121,23,0	0/0:23,1:25:0,56,255
-chr21	43440284	chr21:43440284:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>	.	.	Motif=TG	GT:AD:DP:PL	.	1/1:0,4:4:111,12,0	.
-chr21	43465111	chr21:43465111:M	GGGGGGGGGTGGGGGGG	<16>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:57,9,0	0/1:1,2:3:27,0,9	1/1:0,10:10:184,29,0
-chr21	43468205	chr21:43468205:M	ACACACCACACACCACACACCCCACATACCTCCCACACACACCATACACACACAC	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,12:17:100,0,88	0/1:4,8:12:63,0,75	1/1:1,11:12:108,6,0
-chr21	43468430	chr21:43468430:M	CACACAACCACATACACTACACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:7,12:19:90,0,135	0/1:8,8:16:49,0,170	0/1:6,11:17:83,0,114
-chr21	43468503	chr21:43468503:M	CACACACACCACACACCTCACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:4,12:16:99,0,64	0/1:7,8:15:52,0,147	0/1:2,11:13:95,0,18
-chr21	43468575	chr21:43468575:M	TGTGTGTGTGTGTGGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,25:43:177,0,255	0/1:17,11:28:51,0,255	0/1:21,11:32:38,0,255
-chr21	43468662	chr21:43468662:M	GTGTGTGGTGTGTATATGTGTGTGGGGTATGTGTGTGTGTGGTGTGTGCGTGT	<67.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:3,25:28:207,0,1	0/1:3,11:14:86,0,49	0/1:4,11:15:83,0,64
-chr21	43497651	chr21:43497651:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,9:13:129,0,37	0/1:5,8:13:103,0,50	0/1:10,11:21:139,0,121
-chr21	43518130	chr21:43518130:M	CACAGTCACACACAAAGACACACACACACACACACACACACACACACACACACACAGAGACAGACACAGA	<1.7>	.	.	Motif=CACAGA	GT:AD:DP:PL	0/1:2,2:5:44,0,48	0/1:1,1:4:18,0,36	0/1:1,3:6:71,0,23
-chr21	43533147	chr21:43533147:M	AAACAAACAAACAAACAAACAAACAAACAAACAAA	<7.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:6,3:9:31,0,90	0/1:8,8:17:98,0,98	0/1:8,10:18:135,0,97
-chr21	43542110	chr21:43542110:M	AAAAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,4:8:211,72,101,125,0,107	0/1:4,7,1:14:254,0,107,189,45,227	1/2:0,9,3:13:255,56,71,255,0,238
-chr21	43548107	chr21:43548107:M	AAAAAAAAACAACAACAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:17:160,0,62	0/1:3,5:9:64,0,36	0/1:7,6:14:76,0,87
-chr21	43554760	chr21:43554760:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4,1:9:99,0,62,53,63,127	0/1:9,2,0:12:17,0,222,32,233,255	0/2:4,1,3:8:70,33,121,0,84,91
-chr21	43558011	chr21:43558011:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,9:14:124,0,50	0/1:9,10:20:126,0,97	0/1:6,7:14:85,0,76
-chr21	43576119	chr21:43576119:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,11:12:202,176,173,35,18,0	1/2:0,3,8:13:201,109,95,66,0,34	1/2:1,5,8:14:215,96,106,67,0,44
-chr21	43587666	chr21:43587666:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:9:16,0,64	0/1:4,3:8:27,0,55	0/1:6,3:11:31,0,81
-chr21	43596887	chr21:43596887:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:12:126,0,98	0/1:5,7:18:142,0,125	0/1:4,6:10:123,0,78
-chr21	43598382	chr21:43598382:M	TTTTTTTGTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,16:25:255,0,129	0/1:8,4:14:67,0,195	0/1:12,15:31:255,0,239
-chr21	43599868	chr21:43599868:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,7:27:69,0,241	0/1:11,3:17:2,0,174	0/1:10,7:17:75,0,128
-chr21	43610436	chr21:43610436:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,28:31:255,55,0	0/1:2,8:13:100,0,34	1/1:1,15:17:247,29,0
-chr21	43616042	chr21:43616042:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:35:183,0,123	0/1:13,13:32:102,0,133	0/1:21,2:30:33,0,221
-chr21	43616053	chr21:43616053:M	ATATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/0:35,0:38:0,111,255	0/1:17,10:28:170,0,255	0/1:17,9:31:130,0,255
-chr21	43616931	chr21:43616931:M	AAAAAAAAAAGAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:30,18:50:255,0,255	0/1:18,21:40:255,0,255	0/1:23,15:40:232,0,255
-chr21	43622971	chr21:43622971:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,21:39:255,0,202	0/1:23,22:45:254,0,255	0/1:15,22:37:255,0,164
-chr21	43626868	chr21:43626868:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,20:43:254,0,255	0/1:10,21:34:255,0,77	0/1:13,26:39:255,0,121
-chr21	43631984	chr21:43631984:M	CACACACACACTCCCACACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:7,1:8:0,7,93	0/1:5,3:8:22,0,52	0/1:5,2:7:10,0,56
-chr21	43632872	chr21:43632872:M	TATGTATGTGTGTGTGTGTGTATGTAT	<7.2>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:25,14:47:99,0,170	0/1:24,15:46:93,0,168	0/1:18,10:37:83,0,116
-chr21	43635929	chr21:43635929:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:9:54,0,44	0/1:3,7:10:88,0,21	0/1:6,5:12:51,0,78
-chr21	43636192	chr21:43636192:M	AAAGAAAAAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA	<14.2>	.	.	Motif=AAAGA	GT:AD:DP:PL	1/1:0,1:1:27,3,0	0/1:6,6:13:123,0,122	0/0:13,0:13:0,39,255
-chr21	43636890	chr21:43636890:M	AAAACAAAAAAAAAAAAAAAAAAAAGAAATAAAGAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:133,15,0	0/1:2,3:5:65,0,36	0/1:1,5:8:120,0,6
-chr21	43637487	chr21:43637487:M	AAATAAATAAATAAATAAATAAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:12,21:33:255,0,135	0/1:11,12:23:151,0,132	0/1:18,12:30:138,0,250
-chr21	43637808	chr21:43637808:M	AAAAAAAAAAAAGAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7:20:71,0,183	0/1:21,17:38:188,0,255	0/1:16,14:32:179,0,198
-chr21	43641916	chr21:43641916:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:12:28,0,100	0/1:3,5:8:61,0,27	0/1:6,4:10:40,0,75
-chr21	43642791	chr21:43642791:M	TTTTCTTTTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:9:140,35,72,98,0,104	0/1:2,3,2:9:76,0,58,54,0,75	1/2:1,7,3:12:215,43,75,166,0,169
-chr21	43652401	chr21:43652401:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:10:85,0,23	0/1:3,4:9:55,0,26	0/1:3,2:6:26,0,34
-chr21	43653182	chr21:43653182:M	AAGGGAAAGGAAGGGAAGGGGAAGGGAAGGGAAGGGGAAGGGAAGGGAAGGGGAAGGGAAGGGGAGGGGAGGGGAGGGAAGGGAAGGGA	<14.6>	.	.	Motif=AAGGG	GT:AD:DP:PL	1/1:0,3:3:76,9,0	1/1:0,3:3:74,9,0	1/1:0,3:6:74,9,0
-chr21	43664328	chr21:43664328:M	AAAAAAAAAAAAAAAAAGAAAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:18:142,0,72	0/1:8,4:13:39,0,97	0/1:11,10:22:122,0,127
-chr21	43666717	chr21:43666717:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:14:84,0,67	0/1:5,6:13:76,0,51	0/1:10,8:19:95,0,120
-chr21	43667042	chr21:43667042:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,19:46:227,0,255	0/1:16,22:38:255,0,175	0/1:16,21:37:255,0,187
-chr21	43675844	chr21:43675844:M	ATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<13>	.	.	Motif=ATTTT	GT:AD:DP:PL	0/1:15,12:27:251,0,255	0/1:7,9:16:199,0,146	0/0:17,0:17:0,51,255
-chr21	43680404	chr21:43680404:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,15:31:196,0,203	0/1:12,16:29:212,0,129	0/1:22,16:38:185,0,255
-chr21	43681262	chr21:43681262:M	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<8.8>,<9.8>	.	.	Motif=AGAT	GT:AD:DP:PL	0/2:19,0,10:29:105,162,255,0,255,255	0/1:14,18,0:32:255,0,255,255,246,255	0/2:20,1,15:36:183,217,255,0,255,255
-chr21	43683973	chr21:43683973:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:10:9,0,97	0/0:7,1:8:0,7,100	0/1:5,4:9:42,0,60
-chr21	43691632	chr21:43691632:M	TTTTTATTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:17:132,0,70	0/1:4,5:9:60,0,43	0/1:3,8:12:117,0,19
-chr21	43695170	chr21:43695170:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:234,0,216	0/1:21,18:40:210,0,255	0/1:20,17:40:215,0,252
-chr21	43696984	chr21:43696984:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,39:39:255,115,0	1/1:0,42:43:255,126,0
-chr21	43704221	chr21:43704221:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:5:3,0,55	1/1:0,3:3:50,9,0	0/0:3,0:4:0,9,51
-chr21	43704960	chr21:43704960:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:28:226,0,255	0/1:20,11:34:230,0,255	0/1:18,6:25:101,0,255
-chr21	43705728	chr21:43705728:M	AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA	<36>,<41>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,3:10:130,60,60,69,0,121	1/2:0,2,2:6:85,58,53,31,0,35	1/2:0,6,7:15:255,178,160,103,0,131
-chr21	43706260	chr21:43706260:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:160,0,179	0/1:10,15:26:195,0,99	0/1:15,10:26:113,0,195
-chr21	43706593	chr21:43706593:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:13:82,0,53	0/1:1,3:5:48,0,2	0/1:6,4:10:39,0,74
-chr21	43706951	chr21:43706951:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:15:29,0,146	0/1:6,6:12:68,0,68	0/1:5,12:18:168,0,37
-chr21	43712199	chr21:43712199:M	AAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:12:125,0,9	1/1:1,5:6:68,1,0	0/1:5,14:20:194,0,28
-chr21	43713250	chr21:43713250:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:14:32,0,119	0/0:9,2:13:0,3,139	0/1:5,6:11:73,0,56
-chr21	43713398	chr21:43713398:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:7:67,0,9	0/1:4,1:7:2,0,53	0/1:3,1:8:0,0,58
-chr21	43724682	chr21:43724682:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:28:0,82,255	0/1:16,12:28:130,0,200	0/0:20,1:22:0,46,255
-chr21	43724841	chr21:43724841:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:16,9:32:183,0,255	0/0:33,0:36:0,102,255
-chr21	43726258	chr21:43726258:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:4:6,0,40	0/1:6,3:10:31,0,70	0/0:7,0:7:0,20,119
-chr21	43730103	chr21:43730103:M	TGATTGATTGATTGATTGATTGATTGATT	<5.2>	.	.	Motif=TGAT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:35,0:35:0,105,255	0/1:18,13:31:255,0,255
-chr21	43733238	chr21:43733238:M	CCCCTCCCCATCCCCACCCC	<2>	.	.	Motif=CCCCAT	GT:AD:DP:PL	0/1:2,6:11:134,0,30	0/1:7,2:14:59,0,149	0/1:2,3:5:61,0,37
-chr21	43736630	chr21:43736630:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0,0:7:0,21,201,21,144,125	0/2:7,0,3:12:16,43,242,0,137,109	0/1:6,3,0:10:60,0,156,51,112,140
-chr21	43738925	chr21:43738925:M	TTTTCTTTTTCTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,29,184	0/0:8,0:9:0,24,140	0/1:7,4:13:36,0,101
-chr21	43750953	chr21:43750953:M	TGTGTGTGCATGTGTGTGTGTGTGTGTG	<13>,<15>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,17,0,11:28:255,255,255,255,255,255,255,0,255,255	1/2:1,11,17,0:29:255,255,255,170,0,255,255,255,255,255	0/3:21,0,0,15:37:255,255,255,255,255,255,0,255,255,255
-chr21	43752102	chr21:43752102:M	TGTGTGTGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,19:31:250,0,124	0/0:39,0:39:0,114,255	0/1:21,13:35:136,0,255
-chr21	43757976	chr21:43757976:M	TTTTCTTTTTCTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,9:31:71,0,255	0/1:12,4:18:17,0,171	0/0:28,3:31:0,38,255
-chr21	43763884	chr21:43763884:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:12:92,0,39	0/1:6,12:20:163,0,44	0/1:7,12:19:152,0,66
-chr21	43766212	chr21:43766212:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:18:84,0,118	0/0:22,2:25:0,39,255	0/1:11,11:26:155,0,119
-chr21	43770107	chr21:43770107:M	AAAAACAAACAAACAAAAAAACAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,81,0	0/1:9,17:26:255,0,169	0/1:13,15:28:255,0,255
-chr21	43772172	chr21:43772172:M	AGAGAGAGAGAGAGA	<9.5>,<10.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:25,15,0:42:245,0,255,197,255,255	0/1:10,14,0:24:255,0,169,174,225,255	0/2:25,1,16:42:255,192,255,0,255,255
-chr21	43776445	chr21:43776445:M	GCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGG	<4.6>	.	.	Motif=GCGGG	GT:AD:DP:PL	0/1:16,9:25:169,0,255	0/1:5,13:19:255,0,81	0/0:14,0:14:0,42,255
-chr21	43776956	chr21:43776956:M	TTTCTTTTCTTTCTTTCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	<8.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,1:1:24,3,0	1/1:0,5:5:127,15,0	.
-chr21	43777289	chr21:43777289:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:15:99,0,74	0/1:4,4:8:45,0,45	0/0:7,0:8:0,23,132
-chr21	43781099	chr21:43781099:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:30:0,67,255	0/0:26,2:28:0,47,255	0/1:22,19:42:222,0,255
-chr21	43782527	chr21:43782527:M	AAACAAACAAACAAACAAACAAACAAACAAA	<8.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:14,16:30:221,0,182	0/1:13,11:24:129,0,166	0/1:19,12:31:133,0,255
-chr21	43785069	chr21:43785069:M	TGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,14:24:255,0,139	0/1:5,7:12:124,0,78	0/0:8,0:10:0,27,198
-chr21	43785978	chr21:43785978:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:164,0,202	0/1:13,19:33:243,0,144	0/1:13,9:22:102,0,175
-chr21	43788806	chr21:43788806:M	TTGTTGTTGTT	<2.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:18,0:18:0,53,255	0/1:21,18:39:225,0,255
-chr21	43805277	chr21:43805277:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:18:146,0,74	0/1:6,11:19:142,0,58	0/0:16,2:18:0,18,248
-chr21	43818195	chr21:43818195:M	TTTTTTGTTTTTGTTTTTGTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:29:166,0,150	0/1:7,13:20:150,0,54	0/1:10,22:33:255,0,78
-chr21	43820846	chr21:43820846:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:144,0,90	0/1:10,11:21:128,0,111	0/1:8,8:18:103,0,93
-chr21	43821502	chr21:43821502:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,8:29:60,0,255	0/1:9,7:20:82,0,116	0/0:13,1:14:0,23,211
-chr21	43821542	chr21:43821542:M	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCACGGTCTCCCTCTC	<7.5>	.	.	Motif=CCTCTC	GT:AD:DP:PL	1/1:0,2:6:70,9,0	0/1:0,1:7:36,0,8	1/1:0,4:5:130,15,0
-chr21	43823565	chr21:43823565:M	AAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,8:14:189,139,255,0,160,134	0/2:5,0,7:13:166,119,243,0,133,107	1/2:1,13,2:20:255,10,23,189,0,171
-chr21	43827368	chr21:43827368:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/0:35,2:38:0,76,255	0/1:19,8:27:69,0,255
-chr21	43827517	chr21:43827517:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:17:236,28,0	0/1:7,9:18:117,0,71	1/1:0,15:16:255,47,0
-chr21	43828954	chr21:43828954:M	CCCCCCCCCACCCCCA	<2.3>,<2.5>	.	.	Motif=CCCCAC	GT:AD:DP:PL	1/2:0,19,18:37:255,255,255,255,0,255	0/2:20,0,17:37:255,255,255,0,255,255	0/1:18,19,0:37:255,0,255,255,255,255
-chr21	43836582	chr21:43836582:M	AAACAAACAAACAAACAAACAAACAAAAAAAC	<7>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,31:31:255,91,0	0/1:15,23:38:255,0,170
-chr21	43838471	chr21:43838471:M	CAAAAAAAAACCAAACCAAACCAAACCAAAACAAAA	<6.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,27:27:255,79,0	0/1:15,13:29:158,0,197
-chr21	43840553	chr21:43840553:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:21:130,0,114	0/1:12,10:25:111,0,155	0/0:32,1:35:0,84,255
-chr21	43841445	chr21:43841445:M	TATTTATTTATTTATTTATTTATTTATATATTT	<7.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,18:34:246,0,208	0/1:14,9:23:95,0,186	0/0:28,0:28:0,83,255
-chr21	43841956	chr21:43841956:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,2:17:0,15,216	0/1:21,4:26:7,0,255	0/1:14,15:31:182,0,146
-chr21	43842687	chr21:43842687:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,7:20:72,0,101	0/1:12,17:30:168,0,84	0/0:32,2:40:0,10,255
-chr21	43843376	chr21:43843376:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:33,0,144	0/0:10,2:13:0,3,148	0/0:29,0:30:0,88,255
-chr21	43843987	chr21:43843987:M	TTTTTTTTTTTTTTTCTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:148,0,92	0/1:12,13:27:168,0,132	1/1:2,32:34:255,64,0
-chr21	43844676	chr21:43844676:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:26,1,18:46:214,255,255,0,255,255	1/2:0,24,12:37:255,208,233,255,0,255	0/0:32,2,0:34:0,64,255,100,255,255
-chr21	43846409	chr21:43846409:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,16:18:253,17,0	1/1:2,12:14:172,7,0	0/1:11,6:19:61,0,149
-chr21	43848256	chr21:43848256:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9>,<12>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:9,0,6:15:130,158,255,0,172,221	1/2:0,12,4:16:255,105,71,216,0,255	0/0:16,0,0:16:0,47,255,48,255,255
-chr21	43855411	chr21:43855411:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:116,0,153	0/1:8,5:17:37,0,127	0/0:32,1:36:0,87,255
-chr21	43856394	chr21:43856394:M	ATATATATATATATATATATATATATATATAT	<11.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:0,3,6:15:120,47,113,0,22,49	1/1:0,3,0:5:108,11,0,82,12,74	0/0:0,0,0:3:0,6,27,6,27,27
-chr21	43857286	chr21:43857286:M	AACAACAACAACAACAACAACAA	<5.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:21,16:38:255,0,255	0/1:17,10:27:190,0,255	0/0:32,0:34:0,102,255
-chr21	43857602	chr21:43857602:M	AAACAAACAAA	<1.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:16,18:34:251,0,210	0/1:31,25:56:255,0,255	0/1:13,23:36:255,0,139
-chr21	43857902	chr21:43857902:M	AAACAAACAAACAAGCAAAAAAAAAAACCAAACAAA	<9.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:14,10:25:141,0,235	0/1:10,7:17:100,0,166	0/0:16,0:16:0,48,255
-chr21	43858537	chr21:43858537:M	TTTGTTTGTTTGTTTTTTG	<5.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,48:48:255,141,0	0/1:24,22:46:255,0,255
-chr21	43861489	chr21:43861489:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:20:119,0,110	0/1:7,11:19:130,0,72	0/1:14,10:24:102,0,172
-chr21	43862723	chr21:43862723:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,62,0	0/1:3,9:15:114,0,14	0/1:11,12:23:136,0,119
-chr21	43864121	chr21:43864121:M	AAAAATAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,16,15:31:255,216,255,231,0,255	1/2:0,18,7:27:255,98,107,255,0,255	0/2:13,0,13:27:116,189,255,0,155,116
-chr21	43866121	chr21:43866121:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:25:170,0,253	0/1:11,7:21:125,0,254	1/1:0,13:15:255,39,0
-chr21	43866200	chr21:43866200:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,11:31:114,0,255	0/1:10,13:25:166,0,114	0/0:46,1:47:0,120,255
-chr21	43888399	chr21:43888399:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,41:41:255,121,0	1/1:0,51:51:255,151,0
-chr21	43889287	chr21:43889287:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,17:41:192,0,255	0/1:19,13:33:128,0,242	0/0:25,2:29:0,49,255
-chr21	43890716	chr21:43890716:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:35:255,83,0	1/1:2,30:35:255,66,0	1/1:1,40:42:255,105,0
-chr21	43894218	chr21:43894218:M	TTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14:30:255,0,255	0/1:14,5:24:65,0,255	0/0:24,0:25:0,65,255
-chr21	43895510	chr21:43895510:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,9:12:214,137,128,54,0,19	1/2:1,5,22:30:255,255,255,66,0,12	2/2:2,2,17:21:255,242,255,25,26,0
-chr21	43898886	chr21:43898886:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,25:56:255,0,255	0/1:23,26:49:255,0,255	1/1:0,48:49:255,145,0
-chr21	43901321	chr21:43901321:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15,1:20:255,56,0,255,40,255	1/1:0,11,1:12:255,33,0,205,18,172	1/2:0,13,5:18:255,74,35,227,0,177
-chr21	43904056	chr21:43904056:M	GTGTGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,5:16:255,77,44,197,0,154	1/2:0,13,12:26:255,173,131,230,0,160	2/2:0,2,16:18:255,255,249,52,17,0
-chr21	43905156	chr21:43905156:M	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,7:7:128,21,0	1/1:0,15:17:255,46,0
-chr21	43909293	chr21:43909293:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:56,0,3	0/1:2,2:4:22,0,22	0/1:1,3:4:40,0,6
-chr21	43917922	chr21:43917922:M	GGGTGTGGGTGT	<1.5>	.	.	Motif=GGGTGT	GT:AD:DP:PL	0/1:8,3:11:48,0,183	0/0:9,0:9:0,27,248	1/1:0,2:2:54,6,0
-chr21	43918589	chr21:43918589:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,26:28:255,46,0	0/1:9,11:21:129,0,104	1/1:0,30:30:255,88,0
-chr21	43920208	chr21:43920208:M	TGTGTGTGTGTGTGTGAGAGATTGTGAGTGAGTGTGTGTGTGT	<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:16,13:29:255,0,255	1/1:0,29:29:255,87,0
-chr21	43924181	chr21:43924181:M	TTTTTTTGTATTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:16:255,47,0	0/1:4,5:13:82,0,35	1/1:0,11:11:200,32,0
-chr21	43926637	chr21:43926637:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2,0:2:58,6,0,40,6,34	0/2:1,0,3:4:77,49,67,0,27,18	1/1:0,6,0:8:197,24,0,141,23,124
-chr21	43931923	chr21:43931923:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,9:22:255,255,236,255,0,241	0/1:9,12,0:22:255,0,214,255,249,255	2/2:0,0,29:29:255,255,255,87,87,0
-chr21	43938086	chr21:43938086:M	TCTCTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,21:39:225,0,125	0/0:38,0:38:0,108,255	1/1:0,34:34:255,97,0
-chr21	43938105	chr21:43938105:M	CACACACACACAGACACACACACACACACACACACACTCACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,10:25:66,0,105	0/1:13,12:30:76,0,110	0/0:18,1:21:0,45,227
-chr21	43938317	chr21:43938317:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:131,15,0	0/0:1,0:2:0,3,29	1/1:0,2:4:70,9,0
-chr21	43947679	chr21:43947679:M	TTTCTTTTCTTTTCTTTTTTTTTTTT	<5.4>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:11,10:21:144,0,166	0/1:14,8:24:100,0,226	0/0:23,1:24:0,51,255
-chr21	43955900	chr21:43955900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:12,10:23:114,0,138	0/0:31,1:35:0,82,255
-chr21	43965781	chr21:43965781:M	TTTTTATTTTTA	<1.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/0:49,0:49:0,147,255	0/1:23,11:34:186,0,255	0/0:40,0:40:0,120,255
-chr21	43972148	chr21:43972148:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,13:33:169,0,247	0/1:22,17:39:191,0,255	0/0:46,0:48:0,141,255
-chr21	43975986	chr21:43975986:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,9:34:192,0,255	0/1:17,16:40:255,0,255	0/0:43,0:45:0,132,255
-chr21	43980276	chr21:43980276:M	AAAAAAAAAAAAAAAACAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:105,18,0	0/0:5,0:6:0,17,94	0/1:8,3:12:17,0,110
-chr21	43984790	chr21:43984790:M	TCTTTTTTTTTTCTTTTTC	<3.3>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/1:11,16:27:255,0,173	0/1:14,16:31:255,0,235	0/0:38,0:39:0,115,255
-chr21	43989772	chr21:43989772:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,5,2:9:150,13,21,81,0,76	1/2:0,2,5:7:124,71,65,34,0,14	1/2:1,1,4:6:65,42,64,0,0,0
-chr21	43995336	chr21:43995336:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,8:16:105,0,79	0/1:3,5:8:61,0,28	0/0:21,0:22:0,64,255
-chr21	43998688	chr21:43998688:M	ATATAAATAAATATATATGTATTATATATATATATATAT	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/0:20,3:27:0,13,95	0/0:12,0:14:0,26,83	0/1:6,3:12:13,0,16
-chr21	44006674	chr21:44006674:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:27:0,60,255	0/0:32,0:36:0,105,255	0/1:17,8:25:70,0,228
-chr21	44009589	chr21:44009589:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,4:39:0,42,255	0/1:20,13:34:131,0,242	0/0:31,1:33:0,79,255
-chr21	44014384	chr21:44014384:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/0:47,1:49:0,126,255	0/1:22,22:44:255,0,255
-chr21	44014573	chr21:44014573:M	TTTTTTGTTTGTTTGTTTTTGTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:32:0,96,255	0/0:30,0:31:0,90,255	0/1:5,7:13:149,0,98
-chr21	44015611	chr21:44015611:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:23:0,49,255	0/0:24,0:29:0,81,255	0/1:20,14:35:158,0,255
-chr21	44018139	chr21:44018139:M	TTTTCTTTTTTTTTTTCTTTTT	<3.5>	.	.	Motif=TTTTCT	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/0:35,2:37:0,67,255	0/1:18,29:48:255,0,250
-chr21	44018692	chr21:44018692:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,20,195	0/0:6,0:6:0,18,101	0/1:9,4:13:31,0,118
-chr21	44022040	chr21:44022040:M	TTTCTTTCTTTTTTTTTTTCTTTC	<7>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:44,0:45:0,132,255	0/0:24,0:24:0,71,255	0/1:16,19:36:255,0,199
-chr21	44022277	chr21:44022277:M	TTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:7:0,20,155	0/0:2,0:4:0,11,85	0/1:4,13:17:255,0,69
-chr21	44025822	chr21:44025822:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,4:10:255,66,37,98,0,70	1/1:0,6,0:8:190,20,0,123,20,106	1/2:0,5,4:10:255,65,36,91,0,64
-chr21	44030247	chr21:44030247:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/0:42,0:42:0,123,255	0/1:23,20:44:233,0,255
-chr21	44034326	chr21:44034326:M	CCCCCAACCCCCCCCCCCACCCCC	<3.7>	.	.	Motif=CCCCCA	GT:AD:DP:PL	0/0:4,0:4:0,12,97	0/0:3,0:3:0,9,76	0/1:3,4:8:88,0,52
-chr21	44040771	chr21:44040771:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:21:0,61,255	0/1:16,4:20:9,0,213	0/1:8,5:14:56,0,99
-chr21	44043210	chr21:44043210:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:4:0,12,114	0/0:2,0:3:0,9,68	0/1:3,4:8:98,0,65
-chr21	44046507	chr21:44046507:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,0:23:0,65,255	0/0:11,0:18:0,35,185	0/1:7,5:16:38,0,89
-chr21	44047533	chr21:44047533:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,14,16,0:31:255,255,255,251,0,255,255,255,255,255	0/2:5,1,22,0:29:255,255,255,0,54,15,255,255,96,255	1/3:0,10,0,7:21:255,192,152,255,193,255,210,0,255,255
-chr21	44049879	chr21:44049879:M	TTTTTTTTTTGTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/0:42,0:44:0,126,255	0/1:15,16:34:255,0,255
-chr21	44056948	chr21:44056948:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,1:52:0,134,255	0/0:46,0:47:0,138,255	0/1:21,27:48:255,0,248
-chr21	44060276	chr21:44060276:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,4:14:35,47,197,0,97,122	0/2:7,2,4:13:32,35,169,0,67,105	0/1:14,11,0:26:131,0,173,201,209,255
-chr21	44060902	chr21:44060902:M	ATACATACATACATACA	<6.2>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:23,0:23:0,69,255	0/1:16,16:32:255,0,255
-chr21	44060916	chr21:44060916:M	ACACACACACACACACACACACACACACACAC	<16.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:12,8,0:20:2,0,19,62,79,255	0/1:13,12,0:27:11,0,15,85,90,255	0/2:11,1,8:25:198,211,237,0,39,255
-chr21	44064304	chr21:44064304:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTG	<15>,<20>,<22>	.	.	Motif=TG	GT:AD:DP:PL	0/2:9,0,10,0:21:143,199,255,0,163,103,198,255,138,255	2/3:1,0,8,7:16:197,243,255,104,189,158,122,222,0,193	0/1:12,14,0,0:27:255,0,255,255,212,255,255,212,255,255
-chr21	44076048	chr21:44076048:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:33:0,98,255	0/0:19,0:23:0,67,255	0/1:17,10:30:188,0,255
-chr21	44078441	chr21:44078441:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:9:9,0,98	0/1:12,4:18:25,0,161	0/1:9,8:18:87,0,112
-chr21	44085709	chr21:44085709:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:38:0,84,255	0/0:35,0:38:0,111,255	0/1:20,22:42:255,0,239
-chr21	44127856	chr21:44127856:M	AAAAAAAAAAAAAAAGAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:2,22:26:255,40,0
-chr21	44137693	chr21:44137693:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:35,0,35	0/1:5,5:11:42,0,42	0/0:4,0:5:0,1,44
-chr21	44193121	chr21:44193121:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:27,5,0	.	0/1:5,6:13:63,0,67
-chr21	44195083	chr21:44195083:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,2:12:0,1,135	1/1:1,7:9:105,10,0	0/0:28,0:30:0,74,255
-chr21	44199396	chr21:44199396:M	AAAAAAAAGAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:27:108,0,255	1/1:0,7:7:177,21,0	0/0:30,0:30:0,90,255
-chr21	44205391	chr21:44205391:M	AAAAAAAAAAAAAACAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:34,0,72	0/1:3,2:5:21,0,39	0/0:12,0:12:0,35,223
-chr21	44205747	chr21:44205747:M	TTTTTTTTTGTTTTTTTGTTTTGTTTTTTGTTTTATTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5:17:41,0,171	1/1:0,3:3:52,9,0	0/0:16,0:17:0,50,255
-chr21	44212356	chr21:44212356:M	TGAGTGAGTGAATGTGGGATGAATGAGTGAGTGA	<1.8>	.	.	Motif=TGAG	GT:AD:DP:PL	0/1:31,4:36:27,0,255	0/1:20,7:28:140,0,255	0/1:24,4:29:65,0,255
-chr21	44215767	chr21:44215767:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:6:0,18,109	1/1:0,3:4:41,1,0	0/0:4,0:6:0,17,94
-chr21	44220790	chr21:44220790:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,6:14:71,0,109	0/1:17,10:27:98,0,223	0/0:29,0:29:0,85,255
-chr21	44222935	chr21:44222935:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,15:22:217,0,66	0/1:10,12:22:148,0,112	0/0:24,0:24:0,71,255
-chr21	44232350	chr21:44232350:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:3:25,0,8	1/1:0,4:4:65,12,0	.
-chr21	44238860	chr21:44238860:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/1:5,6:11:70,0,52	0/1:2,2:6:20,0,31
-chr21	44243129	chr21:44243129:M	CCCCCCCCCCGCCCCCCC	<14>,<17>	.	.	Motif=C	GT:AD:DP:PL	0/2:5,0,7:14:75,111,255,0,82,47	1/2:0,6,9:15:255,136,219,161,0,135	0/0:7,0,0:9:0,23,215,22,134,114
-chr21	44254828	chr21:44254828:M	TTGTTGTTGTTGTT	<3.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:20,14:34:255,0,255	0/0:40,0:40:0,120,255
-chr21	44255506	chr21:44255506:M	AAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21,0:35:255,0,255,255,255,255	1/2:0,14,7:24:255,188,146,255,0,255	0/0:44,0,0:44:0,132,255,132,255,255
-chr21	44256420	chr21:44256420:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:35,0,35	0/0:3,0:3:0,9,51	0/0:1,0:1:0,3,17
-chr21	44257681	chr21:44257681:M	AAAAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,5:6:152,81,64,16,5,0	0/1:2,6,5:15:222,0,46,15,1,55	0/0:9,0,0:12:0,36,255,36,255,255
-chr21	44257694	chr21:44257694:M	AAATAAATAAATAAATAAATAAATAAATAAA	<6.5>,<6.8>,<33.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,4,0,3:7:113,33,21,59,30,48,89,0,27,105	1/2:0,6,6,0:12:204,47,14,49,0,14,236,50,50,255	0/0:15,0,0,1:18:0,43,255,36,255,243,39,255,255,255
-chr21	44264447	chr21:44264447:M	TTTTTCTTTTTCTTTTTCTTTTTTTTTT	<34>,<35>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,0,10:23:218,184,255,0,255,255	1/2:0,18,10:28:255,176,96,255,0,238	0/0:19,0,0:19:0,57,255,57,255,255
-chr21	44265035	chr21:44265035:M	TTTTTCTTTTCTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:120,0,65	1/1:0,10:10:172,29,0	0/0:5,0:5:0,15,89
-chr21	44266470	chr21:44266470:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,18:28:248,0,100	1/1:0,32:32:255,94,0	0/0:26,3:29:0,32,255
-chr21	44268689	chr21:44268689:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,15:18:255,34,0	0/1:2,11:14:150,0,4	0/1:12,8:20:84,0,155
-chr21	44269854	chr21:44269854:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:30:169,0,205	0/1:13,13:27:147,0,156	0/0:37,1:40:0,96,255
-chr21	44270162	chr21:44270162:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:9:65,0,47	0/1:1,6:8:81,0,6	0/0:18,0:19:0,56,255
-chr21	44271133	chr21:44271133:M	CTTTTCTTTCTTTTCTTTTCTTCTCTTTTTTTTTTTT	<7.2>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:14,12:27:133,0,157	1/1:1,22:25:255,55,0	0/0:20,0:22:0,61,255
-chr21	44276240	chr21:44276240:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,19:41:234,0,255	1/1:3,31:38:255,57,0	0/0:31,2:33:0,61,255
-chr21	44277413	chr21:44277413:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,2:9:10,0,91	0/1:7,3:11:19,0,98	0/1:1,2:5:23,0,18
-chr21	44278068	chr21:44278068:M	TTTTCTTTTCTTTTCTTTTCTTTCTTTTTTTT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:14,18:32:255,0,255	0/0:29,0:30:0,87,255	0/1:9,22:32:255,0,148
-chr21	44278712	chr21:44278712:M	TTATTTTATTTTATTTATTTTATTTTATTTTATATTTTATTTTATTTTATTTTATTTTATTTTATT	<12.2>,<14.2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:2,5,0:7:77,0,18,95,33,161	0/2:3,0,3:7:37,54,124,0,46,37	0/1:8,4,0:13:40,0,116,74,128,230
-chr21	44280278	chr21:44280278:M	AAAAGAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:169,0,225	0/0:40,0:42:0,122,255	0/1:21,18:40:209,0,255
-chr21	44303434	chr21:44303434:M	AAAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:108,12,0	1/1:0,4:4:115,12,0	.
-chr21	44308560	chr21:44308560:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:145,11,0	0/1:7,6:15:62,0,92	0/0:9,2:14:0,4,151
-chr21	44311151	chr21:44311151:M	CACACACAGACACACACACAGAGACAGACACGTGCACAAACACACACATGCAGACACACAGACATGCACACAGACGCACACACACACA	<11>,<28>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,1,3:6:81,63,106,0,23,37	0/1:2,3,1:6:64,0,37,40,16,83	0/2:2,0,2:4:53,59,104,0,46,40
-chr21	44337084	chr21:44337084:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:26:0,76,255	0/1:13,8:24:137,0,255	0/0:29,0:33:0,98,255
-chr21	44343669	chr21:44343669:M	AAAAAAAGAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:13,23:37:255,0,255	0/0:47,0:48:0,144,255
-chr21	44344383	chr21:44344383:M	AAAAAAAAAAAAAAAAAAAA	<14>,<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/3:1,12,0,5:20:255,71,105,255,141,255,255,0,255,255	2/3:0,0,10,2:13:255,255,255,44,65,34,255,255,0,255	1/3:1,10,0,7:18:255,104,170,255,200,255,252,0,255,246
-chr21	44356532	chr21:44356532:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,8:12:192,0,31	0/1:11,2:15:15,0,254	0/1:4,8:14:182,0,69
-chr21	44360569	chr21:44360569:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:145,0,181	1/1:0,18:19:255,55,0	0/1:13,12:26:140,0,167
-chr21	44362349	chr21:44362349:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/1:7,9:19:116,0,74	0/1:2,4:7:59,0,15
-chr21	44381936	chr21:44381936:M	GATATGATAGATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATGATAGATAGATAG	<15.2>,<17.2>	.	.	Motif=GATA	GT:AD:DP:PL	1/2:0,12,8:20:255,213,177,255,0,255	2/2:0,0,14:14:255,255,255,42,42,0	1/2:0,12,4:16:255,107,71,255,0,255
-chr21	44389874	chr21:44389874:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:25:137,0,158	0/0:23,2:25:0,38,255	0/1:19,19:40:245,0,227
-chr21	44394318	chr21:44394318:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/0:7,0:8:0,12,107	0/1:1,3:4:40,0,6
-chr21	44398207	chr21:44398207:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:31:198,0,181	1/1:0,20:21:255,51,0	0/1:18,12:31:129,0,247
-chr21	44403956	chr21:44403956:M	ACATACATACACACATGCACATACACATGCATACACACATACA	<9.8>	.	.	Motif=ACAT	GT:AD:DP:PL	0/1:16,11:27:86,0,158	1/1:0,18:20:255,51,0	0/1:13,9:22:69,0,126
-chr21	44404283	chr21:44404283:M	CATACACATATACATGCACACATACATGCACATACACATATACACACATGCATACACATACAAATACATGCAGACACATACA	<1.8>	.	.	Motif=CATACA	GT:AD:DP:PL	0/1:7,2:9:69,0,140	0/0:8,0:8:0,24,188	0/1:7,4:11:159,0,134
-chr21	44404370	chr21:44404370:M	CACACATACATACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:16,8:25:88,0,237	1/1:0,14:14:255,41,0	0/1:22,6:28:33,0,255
-chr21	44407132	chr21:44407132:M	TTCCTCCCTTCCTCCCTTCCTTCCTTCC	<33.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,3:3:36,8,0	1/1:0,2:2:24,5,0	1/1:0,1:1:12,3,0
-chr21	44407451	chr21:44407451:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:60,0,66	1/1:0,6:7:184,21,0	0/1:5,4:10:95,0,113
-chr21	44408655	chr21:44408655:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:13:40,0,92	1/1:0,9:10:148,27,0	0/1:3,7:10:89,0,22
-chr21	44430906	chr21:44430906:M	AATATAAATATA	<2.7>	.	.	Motif=AATATA	GT:AD:DP:PL	0/1:25,20:45:255,0,255	1/1:0,29:29:255,87,0	0/1:19,18:37:255,0,255
-chr21	44430965	chr21:44430965:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,22:47:255,0,255	1/1:1,32:35:255,74,0	0/1:23,16:40:177,0,255
-chr21	44445440	chr21:44445440:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,17:38:210,0,226	0/1:20,18:39:198,0,243	0/1:20,11:31:105,0,255
-chr21	44446004	chr21:44446004:M	AAAAAAAAAACAAAACAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,25:40:255,0,166	0/1:12,19:32:246,0,129	0/1:26,19:45:218,0,255
-chr21	44446922	chr21:44446922:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:110,0,93	0/1:6,5:13:61,0,67	0/1:6,9:18:117,0,65
-chr21	44448242	chr21:44448242:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:5,0,11	0/1:2,3:6:42,0,15	1/1:0,2:2:33,6,0
-chr21	44453121	chr21:44453121:M	CAAAAACAAAAACAAAAACAAAAACAAACAAACAAAAA	<7>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:15,18:39:255,0,242	0/1:10,11:29:182,0,166	0/1:13,10:31:155,0,228
-chr21	44468366	chr21:44468366:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,11:21:246,0,217	0/1:5,10:15:233,0,96	0/1:8,6:14:126,0,183
-chr21	44535897	chr21:44535897:M	AAAAAAAAAAAAAGGAAAAAAGAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,65,255	1/2:1,13,11:25:255,143,127,206,0,154	0/1:5,5,1:12:123,0,105,82,72,140
-chr21	44538423	chr21:44538423:M	CCCCCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	.	1/1:0,10,1:12:255,33,0,195,18,165	1/2:0,1,4:5:83,58,55,17,0,3
-chr21	44542743	chr21:44542743:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAGAAAAAAGAAAAAGAAAAAAA	<49>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:74,0,82	1/1:2,10:13:143,5,0	1/1:1,5:7:77,3,0
-chr21	44551494	chr21:44551494:M	GTGAGTGAGTGAGTGTGTGTGTGAGTGTGTGAGTGAGTGTGTGTGTGAG	<15.2>	.	.	Motif=GTGA	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,9:9:234,27,0	1/1:0,19:19:255,57,0
-chr21	44572835	chr21:44572835:M	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,12:15:255,221,196,26,27,0	1/2:0,10,8:18:255,132,80,164,0,112	2/2:0,0,9:9:255,177,152,27,26,0
-chr21	44582989	chr21:44582989:M	TTTTTCTTTCTTTCTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,37:37:255,109,0	1/1:0,33:33:255,98,0
-chr21	44583184	chr21:44583184:M	CTGAGTGAGCTGAGCTG	<3.6>	.	.	Motif=CTGAG	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,23:23:255,69,0	1/1:0,37:37:255,111,0
-chr21	44588754	chr21:44588754:M	TATGTATGTGTGTATATATATGTATGTGTGTGTGTAT	<9.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:19,4:28:0,22,126	1/1:3,8:15:52,5,0	0/1:14,6:23:2,0,69
-chr21	44588788	chr21:44588788:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:33,0:33:0,95,255	0/1:9,6:16:56,0,89	0/0:24,0:24:0,69,255
-chr21	44594823	chr21:44594823:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:22:27,0,229	0/1:4,4:10:40,0,62	1/1:1,7:10:128,11,0
-chr21	44599135	chr21:44599135:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<21>,<24>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,6,0,0:6:168,18,0,172,18,176,172,18,176,177	3/3:0,0,0,4:5:61,61,61,61,61,61,12,12,12,0	1/2:0,10,4,0:16:255,115,85,255,0,255,255,115,255,255
-chr21	44600560	chr21:44600560:M	ACTCACTCACTCATTCACTCACTCACCCACTCACTC	<8>	.	.	Motif=ACTC	GT:AD:DP:PL	0/1:12,12:24:159,0,160	0/0:23,0:23:0,68,255	0/1:13,17:30:230,0,155
-chr21	44606164	chr21:44606164:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6,0:12:70,0,70,104,88,244	0/1:10,4,1:16:32,0,131,59,122,227	0/2:3,0,7:11:100,127,225,0,43,19
-chr21	44615550	chr21:44615550:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:23:107,0,159	1/1:0,20:24:255,48,0	0/0:22,4:27:0,11,255
-chr21	44635346	chr21:44635346:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	1/1:0,0:1:0,0,0	0/1:5,2:7:14,0,64
-chr21	44645359	chr21:44645359:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,13:24:177,0,113	1/1:1,19:22:255,37,0	0/1:10,9:20:113,0,119
-chr21	44650215	chr21:44650215:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,21:30:255,0,79	1/1:1,30:31:255,74,0	0/1:9,15:24:202,0,94
-chr21	44651980	chr21:44651980:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:3:0,9,53	0/0:3,0:3:0,9,51	0/1:1,3:7:46,0,12
-chr21	44661282	chr21:44661282:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:64,0,70	1/1:0,4:5:79,14,0	0/0:3,0:5:0,14,75
-chr21	44672570	chr21:44672570:M	AAAACAAAAAAAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:31:193,0,211	1/1:0,34:34:255,100,0	0/1:16,22:38:255,0,184
-chr21	44674119	chr21:44674119:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:32:166,0,241	1/1:1,30:34:255,81,0	0/0:28,1:31:0,73,255
-chr21	44674732	chr21:44674732:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<23>,<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	2/4:0,0,5,1,2:8:176,178,199,42,66,51,147,149,17,140,140,136,0,119,131	3/4:1,0,0,7,4:12:217,239,255,232,255,255,38,77,77,43,97,115,114,0,80	1/2:0,7,10,0,0:17:255,255,243,193,0,156,255,255,193,255,255,255,193,255,255
-chr21	44674876	chr21:44674876:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,3:35:0,47,255	0/0:34,3:38:0,58,255	0/1:17,25:42:255,0,188
-chr21	44675528	chr21:44675528:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:138,0,255	1/1:0,46:46:255,135,0	0/1:18,26:44:255,0,205
-chr21	44689713	chr21:44689713:M	ATATATATATATATATATATATATATAT	<15>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:5:41,41,41,8,8,0	.	1/1:0,3,0:3:48,9,0,57,9,88
-chr21	44693648	chr21:44693648:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,138,0	1/1:0,44:44:255,132,0	1/1:0,46:47:255,138,0
-chr21	44708008	chr21:44708008:M	CACACACACACACACACACACACACACACACACACACACCACACA	<17.5>,<19.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,14,0:16:255,45,0,255,42,255	1/1:0,16,0:17:255,51,0,255,51,255	1/2:0,9,11:22:255,255,249,243,0,204
-chr21	44710075	chr21:44710075:M	CCCCCACCCCCAC	<2.3>	.	.	Motif=CCCCCA	GT:AD:DP:PL	.	1/1:0,25:25:255,75,0	0/0:23,0:23:0,69,255
-chr21	44716736	chr21:44716736:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:2,0,5:7:127,133,186,0,53,38	0/2:2,0,4:7:100,108,170,0,62,50	0/1:3,10,0:15:255,0,47,255,80,255
-chr21	44721227	chr21:44721227:M	ACACACACACACACACACACACACACACACACACACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,21:23:255,255,255,64,58,0	0/2:13,0,6:20:52,107,255,0,179,158	1/2:0,13,16:31:255,255,255,216,0,255
-chr21	44721299	chr21:44721299:M	ATAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAG	<10.8>,<12.8>,<13.8>	.	.	Motif=ATAG	GT:AD:DP:PL	2/2:0,0,19,0:19:255,255,255,56,57,0,255,255,56,255	2/3:0,0,12,11:23:255,255,255,199,200,134,185,217,0,151	1/2:1,11,11,0:23:255,189,255,189,0,255,255,208,255,255
-chr21	44721908	chr21:44721908:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,3:11:21,0,104	0/1:8,2:11:2,0,115	0/0:7,1:10:0,11,127
-chr21	44745301	chr21:44745301:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,30:32:255,57,0	0/1:29,19:49:193,0,255	0/1:22,19:41:226,0,255
-chr21	44752615	chr21:44752615:M	AGAGAGAAAGAGAGGGAGAGAGGGAGA	<12.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	0/1:13,12:25:143,0,161	0/1:13,10:23:119,0,175
-chr21	44757725	chr21:44757725:M	GGGGGGTGGGGGGGGGG	<18>	.	.	Motif=G	GT:AD:DP:PL	1/1:1,10:11:158,14,0	1/1:0,8:8:136,23,0	0/1:2,7:9:95,0,8
-chr21	44787093	chr21:44787093:M	AAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,10:23:73,124,255,0,90,60	0/2:14,1,10:27:60,117,255,0,123,109	1/2:0,20,10:39:255,123,144,239,0,255
-chr21	44794530	chr21:44794530:M	TTTTTTTGTTTTTTTTTTTTTTT	<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,6:14:174,100,144,92,0,134	0/1:3,8,2:14:111,0,35,113,10,221	1/1:0,20,0:21:255,62,0,255,63,255
-chr21	44800916	chr21:44800916:M	CAGAGACAGAGA	<1.7>	.	.	Motif=CAGAGA	GT:AD:DP:PL	0/1:22,19:41:255,0,255	0/1:26,26:52:255,0,255	1/1:0,42:42:255,126,0
-chr21	44826357	chr21:44826357:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,15:29:194,0,166	0/1:15,15:30:176,0,176	0/0:33,1:34:0,82,255
-chr21	44826837	chr21:44826837:M	AAAAAAAAAAAAAAAAAAGAAAAA	<17>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,6:30:255,107,89,255,0,255	1/2:1,13,7:24:255,102,151,255,0,255	1/1:0,36,0:40:255,119,0,255,119,255
-chr21	44828164	chr21:44828164:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:18:52,0,255	0/1:6,4:12:73,0,151	0/0:17,0:20:0,59,255
-chr21	44828783	chr21:44828783:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,13:20:200,0,34	0/1:6,5:12:61,0,69	0/0:17,0:17:0,50,255
-chr21	44830608	chr21:44830608:M	GGGGTGGGGGTGGGGGTGGGGGTGGGGG	<5.7>	.	.	Motif=GGGGTG	GT:AD:DP:PL	0/1:10,6:16:67,0,144	0/1:5,4:9:46,0,64	0/0:15,0:15:0,44,255
-chr21	44839696	chr21:44839696:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:59,0,59	0/1:6,7:14:89,0,61	1/1:0,12:15:239,43,0
-chr21	44842396	chr21:44842396:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,8:11:207,0,3	1/1:0,7:10:226,27,0	0/1:1,3:7:84,0,15
-chr21	44844250	chr21:44844250:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,30:31:255,73,0	1/1:2,31:33:255,61,0	1/1:0,40:40:255,118,0
-chr21	44848127	chr21:44848127:M	ACCTCCACCTCC	<1.8>	.	.	Motif=ACCTCC	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:21,19:40:255,0,255	1/1:0,41:41:255,123,0
-chr21	44852184	chr21:44852184:M	TTTTTTATTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:28:186,0,184	0/0:36,0:36:0,106,255	0/1:22,14:36:155,0,255
-chr21	44853508	chr21:44853508:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:9:106,57,62,43,0,86	1/2:1,4,3:8:110,58,62,50,0,100	1/1:1,11,0:13:186,20,0,219,38,255
-chr21	44866210	chr21:44866210:M	ACACACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,19:19:255,55,0	1/1:0,23:28:255,75,0	1/1:0,15:15:247,44,0
-chr21	44866424	chr21:44866424:M	ACACACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:80,12,0	1/1:0,1:2:19,3,0	1/1:0,2:2:39,6,0
-chr21	44870526	chr21:44870526:M	AAAAAAAAAAAAAAAAAAAAAAA	<14>,<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17,1:20:255,45,0,255,21,255	1/1:0,12,0:14:255,42,0,255,42,255	2/2:0,0,4:4:108,110,113,12,12,0
-chr21	44877125	chr21:44877125:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:13:65,0,75	0/1:9,4:14:29,0,126	0/1:4,19:23:255,0,4
-chr21	44880719	chr21:44880719:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:35:255,0,255	0/1:22,12:37:222,0,255	1/1:0,15:15:255,45,0
-chr21	44882992	chr21:44882992:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,19:42:255,0,255	0/1:12,24:38:255,0,222	1/1:0,20:21:255,60,0
-chr21	44883773	chr21:44883773:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:10:56,0,115	0/1:5,2:9:33,0,113	1/1:0,7:9:197,24,0
-chr21	44892605	chr21:44892605:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:9,0,26	0/1:1,1:3:11,0,10	1/1:0,5:5:85,15,0
-chr21	44892734	chr21:44892734:M	AAAAAAAAAAACAAAAAACAAAAAACAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,91,255	0/1:5,13:18:174,0,34	0/0:35,0:36:0,105,255
-chr21	44904606	chr21:44904606:M	ACACAAACACACCACATGCACGCACACACACTCGCACACACATACACACACCAAACACACACACATGCACTCACGCACATACACCACACACA	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:1,1:2:50,0,21	1/1:0,3:4:167,9,0	1/1:0,0:1:0,0,0
-chr21	44906128	chr21:44906128:M	CTTCCCTCCCTTCCCCTTCCCTCCCTTCCCTCCCTTCCCTCCCTCCCTTCCCTCCCCTTCTCTTCCCTTCC	<11.6>	.	.	Motif=CTTCC	GT:AD:DP:PL	0/1:4,8:12:184,0,72	1/1:0,21:21:255,63,0	0/0:3,0:4:0,10,83
-chr21	44914933	chr21:44914933:M	AAAAAAAAAAGAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,93,255	0/0:34,1:36:0,86,255	0/1:21,15:39:137,0,245
-chr21	44922659	chr21:44922659:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,78,0	1/1:0,32:35:255,101,0	1/1:0,22:26:255,76,0
-chr21	44925138	chr21:44925138:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,2:34:0,59,255	0/1:19,13:33:132,0,244	0/0:38,3:42:0,69,255
-chr21	44925397	chr21:44925397:M	AAGGAAGAAGGAAGGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<19.5>,<20.5>	.	.	Motif=AAGG	GT:AD:DP:PL	1/2:0,2,2:5:65,17,8,30,0,18	1/2:0,1,3:7:63,25,14,28,0,15	1/1:0,9,1:14:212,33,0,133,21,104
-chr21	44935942	chr21:44935942:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,97,0	0/1:7,12:19:160,0,68	1/1:1,25:27:255,61,0
-chr21	44938103	chr21:44938103:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,0:47:0,138,255	0/1:20,19:41:220,0,255	0/0:38,2:40:0,81,255
-chr21	44940673	chr21:44940673:M	TTTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,18:33:255,255,245,252,0,162	2/2:0,2,41:44:255,255,255,128,94,0	1/2:0,21,31:52:255,255,255,255,0,226
-chr21	44950101	chr21:44950101:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:21:88,0,171	0/0:16,1:19:0,38,255	0/1:16,18:34:228,0,192
-chr21	44955208	chr21:44955208:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,23:26:255,40,0	1/1:2,15:18:230,18,0	1/1:1,17:18:255,35,0
-chr21	44963376	chr21:44963376:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,9,11:23:255,195,255,147,0,197	2/2:2,0,15:19:248,255,255,21,50,0	1/2:4,11,14:30:255,192,255,132,0,236
-chr21	44968754	chr21:44968754:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:51,0,97	0/0:16,0:17:0,49,255	0/1:6,5:12:53,0,79
-chr21	44988460	chr21:44988460:M	TGTGTGTGCGTGTGTG	<9>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,9:24:96,0,209	0/0:29,0:29:0,85,255	0/1:17,16:33:196,0,213
-chr21	44988491	chr21:44988491:M	GTGTGCGTGTGCATGCGTGTGCGTGCGTGTGTGTGCGTGTGCGTGTGC	<8.3>	.	.	Motif=GTGTGC	GT:AD:DP:PL	0/0:14,4:18:0,12,71	0/0:23,0:23:0,52,165	0/1:5,7:12:23,0,9
-chr21	44992540	chr21:44992540:M	GTGTGTGTGTGTGTGTGAGAGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,11:24:235,0,255	0/0:28,0:28:0,84,255	0/1:11,20:32:255,0,216
-chr21	44994479	chr21:44994479:M	TGTGTGAGTGTGCGTGTGTGTGTGTTGTGTGTGTGTGTGTG	<21.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,6:15:255,160,133,169,0,220	1/1:0,18,0:19:255,56,0,255,57,255	1/2:0,13,7:20:255,185,147,237,0,255
-chr21	45013931	chr21:45013931:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,55,0	1/1:0,15:18:255,52,0	1/1:0,19:21:255,61,0
-chr21	45029237	chr21:45029237:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:17:158,0,41	0/1:10,14:28:180,0,110	0/1:13,9:22:95,0,165
-chr21	45052603	chr21:45052603:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7:20:72,0,183	0/0:33,0:33:0,97,255	0/1:18,15:34:175,0,231
-chr21	45057536	chr21:45057536:M	TTTTTTCTTTTCTTTCTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,9:30:88,0,255	0/0:27,0:27:0,79,255	0/1:15,3:18:2,0,219
-chr21	45059786	chr21:45059786:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,2:19:0,19,255	0/1:15,9:26:94,0,190	0/0:28,1:30:0,70,255
-chr21	45061429	chr21:45061429:M	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT	<10.8>,<11.8>	.	.	Motif=TCTG	GT:AD:DP:PL	0/2:16,1,11:28:237,184,255,0,255,255	0/1:15,9,0:24:88,0,193,133,255,255	0/2:19,0,14:33:255,247,255,0,255,255
-chr21	45065528	chr21:45065528:M	CCCCCCCCCCC	<14>	.	.	Motif=C	GT:AD:DP:PL	0/0:15,0:16:0,48,255	0/0:16,0:17:0,51,255	0/1:5,6:11:129,0,114
-chr21	45092899	chr21:45092899:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,43:44:255,111,0	0/1:29,26:55:255,0,255
-chr21	45105080	chr21:45105080:M	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<6.4>	.	.	Motif=TTGTT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,28:28:255,82,0	1/1:0,29:29:255,86,0
-chr21	45106194	chr21:45106194:M	TTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,11:34:255,200,105,255,0,255	1/1:0,26,0:29:255,78,0,255,84,255	0/2:22,1,15:41:255,255,255,0,255,255
-chr21	45113524	chr21:45113524:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:29,8:38:4,0,237	0/0:38,0:38:0,103,255	0/1:12,11:23:66,0,77
-chr21	45123275	chr21:45123275:M	GTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:0,41:41:255,120,0	0/1:18,23:41:255,0,203
-chr21	45124767	chr21:45124767:M	GTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<24>,<25>,<27>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,9,7:16:255,255,255,183,194,164,119,159,0,213	2/2:0,3,16,0:19:247,195,223,53,4,0,255,255,57,255	1/3:0,12,0,6:18:255,159,133,255,164,255,255,0,209,255
-chr21	45134690	chr21:45134690:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,15:19:225,2,0	0/1:5,22:28:255,0,4	0/1:13,7:24:54,0,199
-chr21	45138923	chr21:45138923:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:26:86,0,201	0/0:17,2:21:0,25,255	0/1:9,12:22:143,0,100
-chr21	45166880	chr21:45166880:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,52:53:255,138,0	0/1:18,38:56:255,0,172
-chr21	45174683	chr21:45174683:M	ATACATACATACATACATACATACATACATACATACATACATACAT	<10.5>	.	.	Motif=ATAC	GT:AD:DP:PL	0/1:16,16:33:210,0,221	1/1:0,37:38:255,111,0	0/0:27,0:28:0,82,255
-chr21	45184449	chr21:45184449:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13:17:242,29,0	1/1:2,21:29:255,49,0	0/1:12,12:25:142,0,152
-chr21	45188614	chr21:45188614:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,21:35:255,0,235	1/1:0,25:27:255,75,0	0/0:52,0:54:0,161,255
-chr21	45189734	chr21:45189734:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/1:17,11:30:104,0,228	0/0:36,1:39:0,96,255
-chr21	45191850	chr21:45191850:M	ATATATATATATATATATATATATATATATAT	<9.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,3:9:101,12,64,94,0,88	2/2:0,0,3:5:15,28,97,6,14,0	1/2:0,2,0:3:50,3,9,48,0,47
-chr21	45191881	chr21:45191881:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:18:255,36,0	1/1:0,0:1:0,0,0	1/1:0,18:19:255,56,0
-chr21	45197500	chr21:45197500:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:16,5:22:21,0,219	0/1:11,9:20:99,0,135
-chr21	45205263	chr21:45205263:M	AAAGAAAGAAAGAAAGAAAGAAAGAAATGAAA	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:31,0:32:0,83,255	0/0:22,0:22:0,64,255	0/1:10,15:30:204,0,86
-chr21	45219990	chr21:45219990:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,7:15:83,107,255,0,143,101	1/2:1,3,12:16:227,155,170,34,0,5	0/1:11,7,1:21:168,0,250,125,175,255
-chr21	45225071	chr21:45225071:M	TTGTTTTGTTTTGTTTTGTTTTGTT	<4>	.	.	Motif=TTGTT	GT:AD:DP:PL	0/1:34,24:58:255,0,255	1/1:0,52:53:255,154,0	0/0:45,0:45:0,133,255
-chr21	45243231	chr21:45243231:M	AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAACAAAAGAAAAAAAGAAAAA	<59>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,0:5:5,0,70	0/1:1,3:4:74,0,16	0/0:6,0:6:0,18,166
-chr21	45249978	chr21:45249978:M	AAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,28:42:255,0,224	0/1:16,16:34:255,0,255	0/0:22,0:29:0,85,255
-chr21	45275885	chr21:45275885:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,14:39:146,0,255	0/1:16,9:26:93,0,207	0/0:32,0:32:0,94,255
-chr21	45287191	chr21:45287191:M	GCCCCGGCCCCTGCCCCTGCCCCTGCCCCTG	<6.2>	.	.	Motif=GCCCCT	GT:AD:DP:PL	0/1:4,4:8:51,0,51	0/0:7,1:8:0,6,105	0/0:5,0:5:0,15,91
-chr21	45290565	chr21:45290565:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:29:205,0,141	0/1:19,16:38:185,0,226	0/0:41,0:41:0,120,255
-chr21	45308087	chr21:45308087:M	ACACACATACACAGACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,11:37:255,0,255	1/1:0,25:25:255,75,0	0/1:20,15:35:255,0,255
-chr21	45311773	chr21:45311773:M	ACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:22,1:26:0,48,255	0/1:8,22:32:255,0,51
-chr21	45311875	chr21:45311875:M	CCATCCATCCATCCATCCATCCATCCATCCATTCATCCATCCATCCATCCATCCA	<14.8>	.	.	Motif=CCAT	GT:AD:DP:PL	0/1:9,11:20:147,0,109	1/1:0,14:14:248,41,0	0/1:3,9:13:127,0,25
-chr21	45346258	chr21:45346258:M	TTTTTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:23:0,66,255	0/1:12,28:42:255,0,234	0/0:13,0:17:0,47,255
-chr21	45350807	chr21:45350807:M	CACACACACACACACACACAC	<8.5>,<9.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,42,0:42:255,126,0,255,124,255	1/2:0,22,22:45:255,255,255,255,0,255	1/1:0,48,0:48:255,144,0,255,142,255
-chr21	45398792	chr21:45398792:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:41:0,122,255	0/0:33,0:36:0,105,255	0/1:17,8:28:140,0,255
-chr21	45401127	chr21:45401127:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,6:7:92,111,170,2,18,0	0/2:7,0,6:13:66,102,247,0,102,84	0/1:6,10,4:21:131,0,88,115,21,255
-chr21	45401382	chr21:45401382:M	TTTGTTTGTTT	<1.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:39,0:39:0,115,255	0/1:29,24:53:255,0,255
-chr21	45412238	chr21:45412238:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:21:255,62,0	1/1:0,11:15:255,37,0	1/1:0,22:27:255,75,0
-chr21	45428891	chr21:45428891:M	TTTCTTTCTTTTCTTTTTTTTTTTT	<4.8>,<5.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:16,9,0:25:87,0,214,156,241,255	0/1:18,18,0:36:216,0,217,255,255,255	0/2:15,2,8:26:74,106,255,0,190,213
-chr21	45432237	chr21:45432237:M	GCTGGGGCTGGGGCTGGGCTGG	<2.7>	.	.	Motif=GCTGGG	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/0:27,0:27:0,80,255	0/1:15,16:31:210,0,191
-chr21	45437211	chr21:45437211:M	CACACACACACACAGACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/0:6,2:8:0,1,40	0/0:12,0:12:0,31,117	1/1:0,3:4:28,7,0
-chr21	45437246	chr21:45437246:M	ACACACACACACTCACACACTCAGACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,3:9:31,0,89	0/0:17,1:18:0,35,255	1/1:0,4:6:91,17,0
-chr21	45437359	chr21:45437359:M	CACACACACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,1:1:19,3,0	1/1:0,7:7:126,21,0	1/1:0,2:2:37,6,0
-chr21	45437435	chr21:45437435:M	CACACACACACTCACTCACAGACAGACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:29,10:40:126,0,255	0/1:25,5:31:37,0,255	0/1:13,8:23:140,0,255
-chr21	45437625	chr21:45437625:M	CACACACACTCACACA	<6>,<10>,<11>,<12>,<16>	.	.	Motif=CA	GT:AD:DP:PL	3/5:0,1,1,3,2,4:11:159,159,182,96,84,94,70,57,76,77,78,68,76,75,90,74,87,18,0,16,118	1/3:0,3,1,2,2,0:8:103,81,96,58,19,81,38,0,69,74,43,6,68,73,85,120,104,100,91,100,198	2/4:0,0,4,1,4,0:9:150,167,219,56,57,30,47,51,17,24,45,57,0,17,30,164,219,57,51,57,220
-chr21	45437689	chr21:45437689:M	CACACACACACACACACTCAGACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	0/1:2,3:8:66,0,17	0/1:1,3:5:50,0,5	1/1:0,7:12:181,31,0
-chr21	45437925	chr21:45437925:M	CACACACACACACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:10,0:12:0,15,77	0/0:10,0:12:0,30,107	1/1:0,4:4:36,10,0
-chr21	45437965	chr21:45437965:M	CACACACACACTCACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:14,0:18:0,2,165	0/0:10,0:14:0,18,137	1/1:1,5:6:61,2,0
-chr21	45438007	chr21:45438007:M	CACACACACACTCACTCACACACAGACACACA	<14>,<17>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,2,3:5:32,19,47,22,0,25	1/2:0,3,2:6:36,10,24,35,0,50	0/0:3,0,1:5:0,1,40,3,12,17
-chr21	45438249	chr21:45438249:M	CACACACACACACTCACACTCAGACACACA	<14>,<16>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,2,0:9:1,0,26,21,34,65	0/0:15,3,1:20:0,21,100,36,96,130	1/2:0,3,3:8:38,19,23,32,0,47
-chr21	45438327	chr21:45438327:M	CACACACACACACTCACACACTCAGACACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/1:2,4:7:51,0,17	0/1:4,3:11:31,0,48	0/1:5,6:15:66,0,78
-chr21	45438371	chr21:45438371:M	CACACACACACACTCACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:35,0:36:0,108,255	0/0:25,0:25:0,75,255	0/1:17,15:32:255,0,255
-chr21	45442905	chr21:45442905:M	GGTGGTGGTGCTGGTGTGGGCGGTGGTGGTGCTGGTG	<6.3>,<11.3>	.	.	Motif=GGT	GT:AD:DP:PL	0/1:8,8,3:20:134,0,255,133,56,191	0/1:9,4,2:15:55,0,243,63,72,128	1/2:2,11,8:21:255,64,246,214,0,209
-chr21	45452843	chr21:45452843:M	ATGTATGTATGT	<2.5>	.	.	Motif=ATGT	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:22,13:35:255,0,255	1/1:0,28:28:255,84,0
-chr21	45470482	chr21:45470482:M	TTTTTTTTTTGTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,12:33:116,0,255	0/1:9,8:18:97,0,100	0/0:18,0:19:0,55,255
-chr21	45479340	chr21:45479340:M	ACACACACTACACACAC	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:18,11:29:255,0,255	0/1:13,14:27:255,0,255	0/0:44,0:44:0,132,255
-chr21	45479602	chr21:45479602:M	CACACACACACACACA	<7>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,15:26:218,0,135	0/1:17,17:34:213,0,208	0/1:18,15:33:191,0,241
-chr21	45484083	chr21:45484083:M	ACACACACACAC	<7>	.	.	Motif=AC	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:12,2:14:0,5,182	0/1:15,5:20:35,0,223
-chr21	45484399	chr21:45484399:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	0/1:27,5:32:4,0,255	0/0:21,0:21:0,62,255	0/1:18,12:30:141,0,250
-chr21	45495709	chr21:45495709:M	CACACATACACGCACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	0/1:23,19:42:208,0,255	0/1:25,18:44:175,0,255	1/1:0,44:46:255,129,0
-chr21	45511050	chr21:45511050:M	ACACCCACACCCATCCACACCCCCACACACCACACACACA	<7>	.	.	Motif=ACACCC	GT:AD:DP:PL	0/1:5,6:11:83,0,65	1/1:0,8:8:154,24,0	0/0:10,0:10:0,30,196
-chr21	45515164	chr21:45515164:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,19:29:255,0,84	1/1:4,34:40:255,34,0	0/0:32,1:34:0,72,255
-chr21	45519571	chr21:45519571:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:71,0,0	1/1:0,9:9:151,26,0	0/1:1,1:3:9,0,20
-chr21	45521021	chr21:45521021:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,14:24:195,0,85	1/1:2,37:39:255,80,0	0/0:35,2:37:0,73,255
-chr21	45527941	chr21:45527941:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,14,12:28:255,183,255,219,0,255	0/2:13,1,9:23:88,136,255,0,171,169	1/1:0,20,0:22:255,64,0,255,65,255
-chr21	45537725	chr21:45537725:M	CCCACCCACCCAC	<2.2>	.	.	Motif=CCCA	GT:AD:DP:PL	0/1:12,4:16:20,0,153	0/1:6,2:8:9,0,72	0/1:10,7:17:65,0,114
-chr21	45541025	chr21:45541025:M	AAGAAGAAGAAGAA	<6.7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,43:43:255,129,0	0/1:24,16:40:255,0,255	1/1:0,35:35:255,105,0
-chr21	45558796	chr21:45558796:M	TTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:10,12:23:153,0,108	0/0:12,1:13:0,20,199
-chr21	45566179	chr21:45566179:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,18,168	0/1:8,3:12:25,0,98	0/0:15,2:19:0,21,242
-chr21	45591594	chr21:45591594:M	ACACACCATCACACCACACACACAAAACACATCACATAGAGACACACACCACACACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:24,13:37:231,0,255	0/1:11,4:23:87,0,255	0/1:17,4:21:42,0,255
-chr21	45597422	chr21:45597422:M	TTTATTTATTTATTTATTTATTTATTTATT	<6.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:18,11:29:127,0,255	0/0:31,0:31:0,91,255	0/1:16,18:34:238,0,201
-chr21	45616060	chr21:45616060:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,47,0	0/1:4,19:23:255,0,1	1/1:2,21:23:255,32,0
-chr21	45624081	chr21:45624081:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:6:69,0,0	0/1:3,5:8:59,0,26	0/1:8,9:17:103,0,86
-chr21	45627812	chr21:45627812:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:17:78,0,115	0/1:8,4:14:28,0,113	1/1:2,14:16:209,12,0
-chr21	45641986	chr21:45641986:M	TTTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:10:233,88,60,79,0,53	1/2:0,6,7:13:255,118,81,101,0,64	0/1:6,8,1:16:188,0,137,117,135,244
-chr21	45644506	chr21:45644506:M	TTTTTTTCTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,36:38:255,74,0	1/1:0,46:47:255,138,0	0/1:15,27:42:255,0,157
-chr21	45645239	chr21:45645239:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:42:255,124,0	1/1:0,39:39:255,115,0	1/1:0,38:39:255,115,0
-chr21	45646054	chr21:45646054:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCT	<26.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,3:6:64,16,0	1/1:0,3:6:44,11,0	1/1:0,5:6:56,13,0
-chr21	45646108	chr21:45646108:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,8,0,8:20:255,235,206,255,167,255,197,0,232,208	1/3:0,4,0,6:14:255,200,188,206,124,203,82,0,93,75	2/3:0,0,5,8:17:255,255,255,176,176,131,122,128,0,83
-chr21	45647063	chr21:45647063:M	AAAAAAAAAACAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,42:42:255,124,0	0/1:18,20:38:255,0,223
-chr21	45652443	chr21:45652443:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:82,0,101	0/1:9,6:15:60,0,111	0/0:20,1:23:0,49,255
-chr21	45654339	chr21:45654339:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,14,81	0/1:4,1:5:2,0,53	0/1:1,4:6:63,0,0
-chr21	45659338	chr21:45659338:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:60,0,85	0/0:8,1:11:0,14,130	0/0:11,0:11:0,32,189
-chr21	45662272	chr21:45662272:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,3:19:255,78,30,255,0,255	1/2:0,10,6:19:255,173,140,255,0,243	1/1:0,9,0:10:255,30,0,255,30,255
-chr21	45663159	chr21:45663159:M	TCTCCTCTCTCTCTCTCTCTCTCTC	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,38:39:255,114,0	1/1:0,37:37:255,109,0
-chr21	45664005	chr21:45664005:M	TTTTTCTTTTTTTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,21:23:255,31,0	1/1:0,18:18:255,53,0	1/1:1,23:25:255,56,0
-chr21	45664213	chr21:45664213:M	AATAATAATAATATAAGAATAATAATAATA	<4.3>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,9:9:249,27,0	1/1:0,9:9:249,27,0	0/1:17,8:25:146,0,255
-chr21	45664591	chr21:45664591:M	TTTTATTTTTTTTAATTTTTTTTTTCTTTTCTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,17:26:255,0,169	0/1:12,12:24:255,0,255	0/0:28,0:28:0,84,255
-chr21	45667076	chr21:45667076:M	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTC	<9.2>,<10.2>,<17.2>	.	.	Motif=TTCT	GT:AD:DP:PL	1/3:0,11,0,8:19:255,221,188,255,220,255,255,0,211,255	1/3:0,10,0,6:16:255,165,135,255,164,255,255,0,180,255	1/2:0,11,8,0:19:255,129,96,206,0,153,255,150,207,255
-chr21	45669788	chr21:45669788:M	TGTGTGTGTGTGTGTGTGT	<8.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:5,3,4:15:52,43,113,0,16,175	0/1:2,3,0:5:21,0,10,36,24,141	0/1:5,1,0:8:12,0,37,36,59,181
-chr21	45669806	chr21:45669806:M	TATATATATATATATATATATATATATATATATATATATAT	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:10:222,13,0	1/1:0,0:2:27,5,0	0/0:1,0:4:0,8,48
-chr21	45676368	chr21:45676368:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,11:37:101,0,255	0/1:20,22:42:255,0,236	0/1:25,28:53:255,0,255
-chr21	45678306	chr21:45678306:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,3,10:26:115,76,255,0,88,100	0/2:15,3,15:33:141,147,255,0,149,133	0/1:25,9,0:35:159,0,255,221,255,255
-chr21	45678319	chr21:45678319:M	AATAATAATAATAAAATAA	<8.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:12,10:27:168,0,251	0/1:19,10:33:147,0,255	1/1:0,27:36:255,33,0
-chr21	45679079	chr21:45679079:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:33,0,48	0/1:5,4:10:42,0,58	1/1:0,4:5:71,12,0
-chr21	45684056	chr21:45684056:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:7:14,0,68	0/1:1,4:5:52,0,2	0/1:5,2:8:11,0,72
-chr21	45685916	chr21:45685916:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:7:32,0,42	0/1:2,2:5:29,0,19	0/0:6,0:6:0,18,103
-chr21	45691385	chr21:45691385:M	TATATATATATATATCTCATATATATATTATATATATATAAAATATATATATCATATATAT	<32.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,5:18:57,0,167	1/1:0,1:1:20,3,0	0/1:3,2:5:27,0,47
-chr21	45691457	chr21:45691457:M	TGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,1:34:0,78,255	0/0:17,0:21:0,46,193	0/1:11,12:23:75,0,63
-chr21	45696793	chr21:45696793:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,27:42:255,0,158	0/1:27,18:48:190,0,255	0/0:33,1:34:0,82,255
-chr21	45697755	chr21:45697755:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:19,0,128	0/0:13,1:16:0,18,206	0/1:19,4:24:1,0,255
-chr21	45714436	chr21:45714436:M	ACACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:26,17:43:182,0,255	0/0:44,0:44:0,130,255
-chr21	45721413	chr21:45721413:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:10:76,0,41	0/1:5,4:10:49,0,55	1/1:0,8:10:159,29,0
-chr21	45731869	chr21:45731869:M	CTTTTTTTTTTCTTTTGCTTT	<3.7>	.	.	Motif=CTTTTT	GT:AD:DP:PL	0/1:15,16:31:255,0,252	0/1:21,24:46:255,0,255	0/0:46,1:47:0,117,255
-chr21	45732505	chr21:45732505:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:34:0,80,255	0/0:38,2:41:0,84,255	0/1:22,21:43:255,0,255
-chr21	45740584	chr21:45740584:M	GTGTGTGTGTGCATGTGAGTGTGTGTGTGGTGTGTGTAGTGTGTGTGTGTGTGTGAAGTGTGTGTG	<34>,<36>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,0,4:15:73,101,245,0,176,255	0/2:4,0,2:6:41,50,99,0,62,95	0/1:5,9,0:16:104,0,39,143,80,255
-chr21	45744119	chr21:45744119:M	TATATATATATATACATATGTATGTATATAACATATATAT	<21>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,16:40:189,0,255	0/1:14,12:26:140,0,175	0/0:43,1:44:0,111,255
-chr21	45750396	chr21:45750396:M	CCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	.	.	1/1:0,4:5:125,15,0
-chr21	45750897	chr21:45750897:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,23:52:255,0,255	0/1:22,22:45:255,0,255	0/0:48,0:48:0,144,255
-chr21	45752969	chr21:45752969:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,2:6:17,0,45	0/1:2,0:3:2,0,24	0/1:2,3:7:51,0,14
-chr21	45757891	chr21:45757891:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:30:184,0,191	0/1:14,16:32:197,0,163	1/1:1,27:30:255,70,0
-chr21	45776463	chr21:45776463:M	TCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTGTCTCCCTCT	<10.8>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:11,11:25:75,0,74	0/1:7,9:17:66,0,42	0/0:18,0:18:0,50,220
-chr21	45786127	chr21:45786127:M	AATAAAAAAATAAATAAATAAATAAATAAAT	<8>,<8.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/2:13,2,9:24:107,130,255,0,191,196	0/1:10,4,2:16:43,0,204,50,134,213	0/1:25,4,0:29:4,0,255,86,255,255
-chr21	45786290	chr21:45786290:M	TTTTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:1,27:30:255,70,0	0/1:27,11:38:91,0,255
-chr21	45789425	chr21:45789425:M	TGTGTATGTGTA	<1.7>	.	.	Motif=TGTGTA	GT:AD:DP:PL	0/1:21,18:39:255,0,255	0/1:17,18:35:255,0,255	0/0:37,0:37:0,111,255
-chr21	45795310	chr21:45795310:M	TTTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:36:0,105,255	0/0:27,1:30:0,70,255	0/1:25,10:38:69,0,255
-chr21	45810219	chr21:45810219:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGTGTGTGTG	<22>,<26>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,0,4:21:56,106,255,0,255,255	0/2:17,0,8:27:182,232,255,0,255,255	0/1:8,10,0:19:123,0,99,178,151,255
-chr21	45810430	chr21:45810430:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,18:38:234,0,243	0/1:26,19:45:203,0,255	0/0:24,2:29:0,48,255
-chr21	45816743	chr21:45816743:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,1,10:27:110,167,255,0,239,236	0/2:11,0,17:28:222,255,255,0,166,114	0/1:18,15,1:34:178,0,243,255,255,255
-chr21	45823723	chr21:45823723:M	TTTTTTTTTTATTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,75,0	1/1:0,40:45:255,114,0	1/1:2,35:42:255,77,0
-chr21	45826259	chr21:45826259:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:31:0,90,255	0/1:10,15:27:183,0,106	0/0:25,0:26:0,76,255
-chr21	45831409	chr21:45831409:M	AAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:255,41,0	0/1:5,14:20:255,0,82	0/1:1,13:16:255,0,1
-chr21	45831704	chr21:45831704:M	AGTTAGTTAGTTAGTT	<5>	.	.	Motif=AGTT	GT:AD:DP:PL	0/1:30,17:47:190,0,255	0/1:17,18:35:224,0,206	0/1:22,13:35:141,0,255
-chr21	45840457	chr21:45840457:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:13:1,0,134	0/1:6,7:17:90,0,63	0/1:9,3:12:16,0,120
-chr21	45842389	chr21:45842389:M	TTTGTTTGTTTGTTTGTTTGTT	<4.5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:21,15:36:183,0,255	0/1:20,29:49:255,0,219	0/0:40,0:40:0,118,255
-chr21	45851607	chr21:45851607:M	ATAGATGGATGGATAGATAGATAGATAGATAGATAG	<8>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:17,15:32:189,0,224	0/1:18,13:31:139,0,227	0/1:26,16:43:182,0,255
-chr21	45868412	chr21:45868412:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,71	1/1:0,4:8:68,12,0	0/1:6,1:10:6,0,80
-chr21	45877796	chr21:45877796:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,22:41:255,0,238	0/1:16,18:35:228,0,183	0/1:22,23:45:255,0,255
-chr21	45919815	chr21:45919815:M	GTGTGTGTGTGTGTGTGTGTGTG	<7.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,12:32:249,0,176	0/1:18,12:35:227,0,255	0/1:6,13:29:255,0,137
-chr21	45975615	chr21:45975615:M	GTGTGGGTGTGGGTG	<1.5>	.	.	Motif=GTGTGG	GT:AD:DP:PL	0/1:12,20:32:255,0,137	0/0:36,0:37:0,108,255	0/1:12,28:41:255,0,111
-chr21	45977004	chr21:45977004:M	TGGGGGTGGGGGTGGGGGTGGGGGTGG	<3.5>	.	.	Motif=TGGGGG	GT:AD:DP:PL	0/1:3,7:10:105,0,28	1/1:0,10:10:181,29,0	0/1:9,8:17:100,0,119
-chr21	45980161	chr21:45980161:M	ATAATAATAATAATAATAA	<5.3>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:14,16:30:216,0,179	1/1:0,34:34:255,100,0	0/1:13,14:27:180,0,162
-chr21	45980178	chr21:45980178:M	AAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAAGGAGAAG	<22.5>	.	.	Motif=AAGGAG	GT:AD:DP:PL	0/1:20,7:27:10,0,255	0/0:25,0:25:0,75,255	0/0:19,1:20:0,47,255
-chr21	46016495	chr21:46016495:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	0/1:19,15:35:165,0,246	1/1:1,49:50:255,129,0
-chr21	46018181	chr21:46018181:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,18,15:34:255,255,193,255,0,240	0/2:17,0,18:36:255,255,255,0,255,255	1/2:0,19,17:36:255,255,206,255,0,244
-chr21	46019068	chr21:46019068:M	TTTTTTTTTTTT	<13>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,8,7:17:255,255,255,129,124,81,162,147,0,119	1/2:1,17,6,0:26:255,140,100,255,0,255,255,98,255,255	2/2:1,0,21,3:26:255,255,255,44,62,0,255,255,9,255
-chr21	46031087	chr21:46031087:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:31:182,0,201	1/1:3,20:23:255,15,0	0/1:12,13:25:159,0,140
-chr21	46032166	chr21:46032166:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:24:96,0,195	1/1:1,22:24:255,53,0	0/1:18,7:25:52,0,249
-chr21	46043985	chr21:46043985:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:6,4:10:39,0,74	0/0:15,0:16:0,47,255
-chr21	46044147	chr21:46044147:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,10:22:255,171,120,161,0,139	1/2:2,7,8:18:255,111,97,67,0,91	1/2:1,6,8:15:255,123,99,72,0,74
-chr21	46053697	chr21:46053697:M	ACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,13:40:242,0,255	0/1:24,22:48:255,0,255	0/0:32,0:34:0,101,255
-chr21	46068541	chr21:46068541:M	TGTGTGTGTGTGTGTGCATGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,15:16:255,47,0	1/1:0,14:16:255,44,0	1/1:0,14:14:253,41,0
-chr21	46068644	chr21:46068644:M	GTGTGTGTGTGCGTGTGTGTGCGTGTG	<8.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:3,0:3:0,9,136	0/0:4,0:4:0,12,175	0/1:1,7:9:187,0,29
-chr21	46068728	chr21:46068728:M	GTGTGTGTGTG	<4.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,5:20:28,0,198	0/0:9,0:9:0,26,149	0/1:7,8:15:92,0,73
-chr21	46068804	chr21:46068804:M	GTGTGTGTGTGTG	<5.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:22,8:30:68,0,255	0/0:33,0:33:0,97,255	1/1:0,17:17:255,50,0
-chr21	46068849	chr21:46068849:M	TGTGCATGTGTGTGCAAGTCCATGTGTGTGCATGTGCATGTG	<4.3>	.	.	Motif=TGTGCA	GT:AD:DP:PL	0/0:13,0:15:0,20,255	0/0:19,0:19:0,57,255	0/1:0,3:4:87,0,9
-chr21	46068913	chr21:46068913:M	TGTGTGTGTGTGCATGTGTGCCTGGGTGTGTGTGGGTGTGTG	<10>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,9:16:255,0,50	1/1:0,20:21:255,58,0	0/0:5,0:5:0,15,137
-chr21	46069242	chr21:46069242:M	GTGTGTGTGTGCGTGTGTGTGTGCGCATGTGTGTCTGGGTGTGTGCGCGTGTGTGCGTGTGCGTGTGTG	<27.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,3:8:47,0,94	0/0:6,0:6:0,18,145	1/1:0,11:11:255,33,0
-chr21	46070708	chr21:46070708:M	AAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAA	<33>,<34>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,6:17:255,91,61,138,0,142	2/2:0,0,11:11:255,220,192,33,32,0	1/1:3,18,0:21:255,8,0,255,61,255
-chr21	46090107	chr21:46090107:M	TGTTGTTGTTGTTG	<3.7>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:1,6:7:147,0,3	1/1:0,4:4:112,12,0	0/0:17,0:17:0,51,255
-chr21	46090714	chr21:46090714:M	TGGTGATGGTGATGATGATGGCAATGGTGATAATGGTGATGGGGTGATGGTGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTG	<22.5>	.	.	Motif=TGGTGA	GT:AD:DP:PL	1/1:0,3:5:32,4,0	1/1:0,4:8:47,9,0	1/1:0,4:5:51,11,0
-chr21	46090809	chr21:46090809:M	AGTAGTAGTAGT	<45>	.	.	Motif=AGT	GT:AD:DP:PL	0/1:2,3:5:23,0,42	0/1:1,3:4:26,0,17	0/1:1,3:4:26,0,18
-chr21	46090843	chr21:46090843:M	TGATGGTGATGATGATG	<45>	.	.	Motif=TGA	GT:AD:DP:PL	0/1:7,3:10:8,0,164	0/0:10,3:13:0,1,239	0/1:9,3:12:2,0,212
-chr21	46097062	chr21:46097062:M	CAGACACAGACACACACCACACACAGATACACACACCACAGACTCAAACTCAGTCTCAGACACAGACACA	<2.3>	.	.	Motif=CAGACA	GT:AD:DP:PL	0/1:11,34:45:255,0,147	0/1:7,26:33:255,0,80	0/1:11,17:28:255,0,198
-chr21	46097121	chr21:46097121:M	ACACAGACACACACCACACACTCAGATGCACACACCACACACACTCAGTCTCAGACACACACACACACCACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,8:14:255,0,115	0/1:11,8:19:250,0,230	0/1:6,5:11:192,0,124
-chr21	46099890	chr21:46099890:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:4:23,0,23	0/1:1,3:7:36,0,13	0/0:4,0:4:0,12,67
-chr21	46101848	chr21:46101848:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	.	1/1:0,9:10:255,30,0
-chr21	46102707	chr21:46102707:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,48:52:255,134,0	1/1:2,42:46:255,99,0	1/1:0,30:42:255,10,0
-chr21	46116917	chr21:46116917:M	ACACACGCATACACACACACACACACACACACACACACAC	<22>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/2:8,0,4:13:90,113,255,0,207,195	2/2:0,0,7:8:212,212,212,24,24,0	0/1:10,9,0:20:198,0,227,234,255,255
-chr21	46123600	chr21:46123600:M	GATGGATGAATGGATGGATTGCTGGATGAGTGGGTGGGTGGATGGAT	<12.8>	.	.	Motif=GATG	GT:AD:DP:PL	0/1:12,3:15:14,0,184	1/1:0,21:21:255,62,0	0/0:31,0:31:0,91,255
-chr21	46123892	chr21:46123892:M	TGGATAGATGGATGGGTGGGTGGATAGAGGATGGATGG	<4.8>	.	.	Motif=TGGA	GT:AD:DP:PL	0/0:21,0:21:0,63,255	0/0:28,0:28:0,84,255	0/1:3,7:12:167,0,97
-chr21	46123969	chr21:46123969:M	GTGAGTGAGTG	<1.8>	.	.	Motif=GTGA	GT:AD:DP:PL	0/1:17,15:32:195,0,235	1/1:0,36:36:255,106,0	0/0:26,0:26:0,77,255
-chr21	46141304	chr21:46141304:M	TTTTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,12:24:156,0,153	1/1:1,21:23:255,50,0	0/0:34,1:35:0,85,255
-chr21	46141717	chr21:46141717:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:207,0,206	1/1:1,37:40:255,99,0	0/0:40,0:42:0,123,255
-chr21	46147290	chr21:46147290:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:31:255,91,0	1/1:1,30:34:255,81,0	1/1:1,39:41:255,92,0
-chr21	46147943	chr21:46147943:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:17,0,52	0/0:12,0:15:0,40,216	1/1:0,13:13:222,38,0
-chr21	46162591	chr21:46162591:M	TTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:9:230,54,28,108,0,84	1/2:0,1,4:5:128,68,55,18,0,3	1/2:0,5,5:11:255,88,60,89,0,60
-chr21	46164795	chr21:46164795:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:12:56,0,93	0/1:5,11:16:144,0,40	0/0:14,0:17:0,49,255
-chr21	46171429	chr21:46171429:M	AAAAAAAAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,10:25:255,179,214,255,0,255	1/1:0,23,0:25:255,75,0,255,75,255	2/2:0,0,17:19:255,255,255,55,56,0
-chr21	46171940	chr21:46171940:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:13:180,0,74	1/1:0,11:11:255,33,0	0/0:9,1:10:0,4,219
-chr21	46174333	chr21:46174333:M	AAAAAACAAAACAAAAAAAAAAAAAAAA	<20>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:4:82,0,0,85,9,93	1/1:0,3,0:5:119,15,0,119,15,119	0/2:1,0,8:11:109,140,255,0,39,10
-chr21	46179076	chr21:46179076:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:214,0,161	1/1:2,19:25:255,20,0	0/0:19,0:21:0,60,255
-chr21	46184714	chr21:46184714:M	CCACCACCACCACCA	<4>	.	.	Motif=CCA	GT:AD:DP:PL	0/1:22,19:41:115,0,152	0/1:26,20:46:110,0,181	0/1:37,13:50:18,0,255
-chr21	46186838	chr21:46186838:M	TTTGTTTGTTTGATTTCTTTTTTGT	<5.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,25:27:255,71,0	1/1:0,31:34:255,88,0	0/1:8,26:36:255,0,10
-chr21	46198268	chr21:46198268:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:40:255,98,0	1/1:0,31:32:255,94,0	0/1:16,22:40:255,0,171
-chr21	46198830	chr21:46198830:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,4:7:52,69,131,0,30,18	0/2:1,0,2:5:33,34,65,0,5,6	0/1:3,6,2:11:71,0,42,68,10,160
-chr21	46201802	chr21:46201802:M	TTTTTTTTTTTTTT	<11>,<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,14,8:25:255,255,255,113,224,173,231,255,0,255	2/2:0,0,22,0:23:255,255,255,67,66,0,255,255,69,255	1/3:0,21,0,8:30:255,142,158,255,219,255,255,0,255,255
-chr21	46218728	chr21:46218728:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:14:0,41,243	0/1:12,4:16:22,0,158	0/0:24,0:24:0,70,255
-chr21	46221363	chr21:46221363:M	TTTATTTTATT	<2.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,35:35:255,105,0	1/1:0,36:36:255,108,0
-chr21	46226136	chr21:46226136:M	AAAAAAAAAAAAAAAATACAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,4:26:14,0,255	0/0:18,0:19:0,55,255	0/1:7,12:21:170,0,64
-chr21	46227705	chr21:46227705:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:33:0,93,255	0/0:36,0:43:0,113,255	0/1:18,12:32:241,0,255
-chr21	46228807	chr21:46228807:M	CCGCCCAGCCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCC	<7>	.	.	Motif=CCGCC	GT:AD:DP:PL	0/1:3,2:7:35,0,57	1/1:0,5:6:122,15,0	0/1:1,4:6:80,0,8
-chr21	46229190	chr21:46229190:M	GGGCGGGGGCGGGG	<3.3>	.	.	Motif=GGGCGG	GT:AD:DP:PL	0/1:12,3:15:14,0,187	0/0:11,0:11:0,32,200	0/1:6,6:12:77,0,78
-chr21	46232748	chr21:46232748:M	AAAAAACAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,26:54:255,0,255	1/1:0,33:33:255,97,0	0/0:40,0:40:0,118,255
-chr21	46237101	chr21:46237101:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,11:13:188,220,255,20,36,0	2/2:1,0,9:10:136,163,255,12,27,0	1/2:1,8,4:16:191,67,88,147,0,219
-chr21	46242986	chr21:46242986:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:46:0,118,255	0/0:30,1:32:0,77,255	0/1:15,21:36:234,0,136
-chr21	46247124	chr21:46247124:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/0:32,0:33:0,87,255	0/1:18,14:34:165,0,236
-chr21	46248617	chr21:46248617:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:31:0,88,255	0/0:37,1:39:0,97,255	0/1:22,15:40:158,0,255
-chr21	46251882	chr21:46251882:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:6:18,0,41	0/0:2,0:4:0,11,57	1/1:1,6:8:86,3,0
-chr21	46257925	chr21:46257925:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:19:0,55,255	0/0:15,1:17:0,32,248	0/1:5,5:11:64,0,56
-chr21	46258738	chr21:46258738:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:21,26,0:47:255,0,255,255,255,255	1/1:0,51,0:51:255,150,0,255,153,255	0/2:20,0,14:34:255,255,255,0,255,255
-chr21	46259905	chr21:46259905:M	AAAAAAAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,15:25:255,0,145	0/0:8,0:9:0,26,227	0/1:9,18:31:255,0,173
-chr21	46261733	chr21:46261733:M	AAAAAAAAAAAAAAAAAGAAAGAAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,6:13:70,91,250,0,115,81	2/2:0,0,16:16:255,255,255,47,47,0	0/1:11,14,2:27:255,0,232,212,160,255
-chr21	46274939	chr21:46274939:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:28,0,63	0/0:7,1:9:0,10,111	1/1:0,1:4:16,2,0
-chr21	46276741	chr21:46276741:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9,0:26:113,0,204,181,236,255	1/1:0,23,0:25:255,73,0,255,75,255	0/2:9,1,4:14:32,53,217,0,120,132
-chr21	46278165	chr21:46278165:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:38:0,108,255	0/0:41,1:45:0,104,255	0/1:21,30:51:255,0,255
-chr21	46278990	chr21:46278990:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,4:20:19,0,198	0/1:8,4:15:34,0,112	0/0:22,4:29:0,4,255
-chr21	46280813	chr21:46280813:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:37,1:38:0,94,255	0/1:21,14:35:139,0,255
-chr21	46285613	chr21:46285613:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,0:37:0,108,255	0/0:36,0:38:0,111,255	0/1:20,14:34:155,0,255
-chr21	46288016	chr21:46288016:M	AAAAAAAAAAGAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:29:0,85,255	0/0:27,1:29:0,65,255	0/1:20,19:39:235,0,255
-chr21	46288678	chr21:46288678:M	AAAAAGAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:28:0,77,255	0/0:28,0:29:0,84,255	0/1:11,21:33:255,0,202
-chr21	46290211	chr21:46290211:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/0:42,2:44:0,94,255	0/1:28,19:47:212,0,255
-chr21	46291020	chr21:46291020:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:25:0,55,255	0/0:15,1:20:0,27,243	0/1:15,5:20:30,0,208
-chr21	46294759	chr21:46294759:M	AAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,82,0	1/1:0,19:23:255,67,0	1/1:0,35:36:255,108,0
-chr21	46299048	chr21:46299048:M	TTTTTTTTTTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,8:17:255,195,177,87,0,176	2/2:0,1,10:13:255,248,247,15,3,0	1/2:0,3,9:13:255,231,227,37,0,57
-chr21	46301144	chr21:46301144:M	TTTTTATTTTATTTTT	<2.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	1/1:0,33:33:255,91,0	1/1:0,41:41:255,113,0	1/1:0,29:29:255,80,0
-chr21	46302072	chr21:46302072:M	TGGTGGTGGTGGTGGTGGTGGTG	<8.7>	.	.	Motif=TGG	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:29,0:29:0,85,255	0/1:18,11:29:122,0,253
-chr21	46303678	chr21:46303678:M	ACACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,5:14:55,0,15	0/0:11,0:13:0,34,133	1/1:1,4:7:51,8,0
-chr21	46303709	chr21:46303709:M	ATATATATATATATATATATATATATATATATATATAT	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:0,0,3:7:80,57,73,0,18,3	1/2:0,4,3:11:255,54,22,101,0,71	0/0:0,0,0:2:0,3,9,3,9,9
-chr21	46303746	chr21:46303746:M	TTTTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:0,0,0:2:2,4,8,0,3,1	2/2:0,0,3:4:106,80,71,12,9,0	1/2:0,4,2:8:163,46,28,94,0,81
-chr21	46304021	chr21:46304021:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:39,0,5	0/0:1,0:1:0,3,16	1/1:0,4:4:66,12,0
-chr21	46305328	chr21:46305328:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,3,5:12:81,45,138,25,0,99	0/2:5,0,4:9:42,68,187,0,71,59	0/2:6,1,2:9:9,17,122,0,70,95
-chr21	46306070	chr21:46306070:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:104,0,96	0/0:23,1:24:0,53,255	1/1:1,24:26:255,58,0
-chr21	46309462	chr21:46309462:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:24:134,0,133	1/1:1,24:26:255,59,0	0/1:15,4:20:12,0,215
-chr21	46320513	chr21:46320513:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:56,5,0	1/1:0,5:8:183,23,0	0/0:1,0:2:0,4,33
-chr21	46321902	chr21:46321902:M	TTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:11:211,87,92,127,0,118	0/2:1,0,5:9:131,143,194,0,31,8	0/1:1,5,0:10:131,0,26,139,28,178
-chr21	46327386	chr21:46327386:M	TTTTCTTTTTCTTTTTTTTTCTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:35:0,105,255	0/0:35,0:35:0,105,255	0/1:23,11:34:196,0,255
-chr21	46335690	chr21:46335690:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:4,4,9:18:76,66,159,17,0,65	0/1:11,7,0:19:41,0,77,92,100,250	0/2:13,1,8:22:34,82,255,0,108,105
-chr21	46336987	chr21:46336987:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTG	<7>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,36:37:255,108,0	1/1:0,36:36:255,106,0
-chr21	46338605	chr21:46338605:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:1,22:25:255,55,0	1/1:0,14:16:255,46,0
-chr21	46341947	chr21:46341947:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:23:255,49,0	1/1:1,26:28:255,64,0	1/1:2,31:35:255,66,0
-chr21	46353716	chr21:46353716:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,10:22:255,255,255,255,0,255	1/1:0,27,0:28:255,84,0,255,84,255	0/2:8,0,9:20:218,253,255,0,203,158
-chr21	46358598	chr21:46358598:M	TTTTTGTTGTTGTTGTTGTTTTGTTGTTTTGTTTTTTTTTTTTTT	<7.7>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:9,6:16:17,0,33	0/0:16,0:16:0,38,126	1/1:0,10:10:79,24,0
-chr21	46360214	chr21:46360214:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:6,0,34	0/0:8,0:9:0,26,143	0/1:1,4:6:60,0,0
-chr21	46360521	chr21:46360521:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:2,17:21:255,26,0	1/1:1,17:19:255,37,0
-chr21	46367311	chr21:46367311:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:17:0,47,255	0/0:22,0:23:0,67,255	0/1:7,9:17:119,0,75
-chr21	46371215	chr21:46371215:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,20:28:227,25,0	1/1:1,12:15:154,26,0	0/1:9,6:16:37,0,77
-chr21	46373432	chr21:46373432:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:255,30,0	1/1:1,7:11:202,1,0	0/1:2,4:7:96,0,37
-chr21	46374850	chr21:46374850:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	0/1:3,2:6:19,0,35	0/1:5,2:7:14,0,65
-chr21	46381197	chr21:46381197:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,4,2,0:6:161,31,14,62,0,45,134,26,62,124	1/1:0,8,1,0:11:255,33,0,158,16,129,255,30,156,246	2/3:0,2,7,4:13:255,179,149,62,30,24,128,58,0,94
-chr21	46395592	chr21:46395592:M	AATAATAATAAAATA	<6>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:40,10:50:42,0,255	0/1:42,16:58:118,0,255	0/1:46,16:62:115,0,255
-chr21	46398805	chr21:46398805:M	TTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:3,0,58	0/0:6,1:8:0,6,102	0/1:2,4:6:53,0,18
-chr21	46400513	chr21:46400513:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:12,0,12	1/1:0,1:2:17,3,0	0/1:1,3:4:40,0,6
-chr21	46408720	chr21:46408720:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:116,0,63	1/1:0,8:10:157,29,0	0/0:15,0:15:0,44,255
-chr21	46409191	chr21:46409191:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:8:249,24,0	0/1:0,4:7:110,0,5	0/1:6,2:10:25,0,187
-chr21	46413995	chr21:46413995:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,50,0	1/1:0,20:21:255,61,0	0/1:15,11:28:107,0,162
-chr21	46414456	chr21:46414456:M	CCTCCTCCTCCT	<7>	.	.	Motif=CCT	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,5:5:137,15,0	0/0:13,0:13:0,39,255
-chr21	46438670	chr21:46438670:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:13:0,2,163	0/0:10,2:12:0,1,137	0/1:6,7:13:85,0,68
-chr21	46444648	chr21:46444648:M	TTTTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,10:27:255,184,205,255,0,255	1/1:0,20,0:22:255,66,0,255,66,255	1/2:0,10,16:29:255,255,255,255,0,228
-chr21	46449317	chr21:46449317:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:36:0,87,255	0/0:28,1:35:0,74,255	0/1:22,9:34:61,0,255
-chr21	46453744	chr21:46453744:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,6:14:174,93,133,98,0,137	1/1:0,21,0:23:255,67,0,255,69,255	1/2:4,6,6:19:131,53,138,60,0,143
-chr21	46463681	chr21:46463681:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:7,0,12:19:255,199,255,0,117,140	0/0:17,1,0:21:0,42,255,57,255,255	1/2:1,7,8:16:255,116,88,82,0,81
-chr21	46464818	chr21:46464818:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<33>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,1:5:114,16,5,49,0,37	2/2:0,0,4:5:142,88,75,15,14,0	0/0:0,0,0:1:0,0,0,0,0,0
-chr21	46467296	chr21:46467296:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,7:18:137,0,170	1/1:0,3:3:81,9,0	0/1:10,5:16:89,0,225
-chr21	46468262	chr21:46468262:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:27,0,9	0/1:1,3:4:39,0,5	1/1:0,4:5:80,14,0
-chr21	46468413	chr21:46468413:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:33:132,0,155	1/1:0,16:20:255,53,0	0/1:11,9:24:95,0,104
-chr21	46470475	chr21:46470475:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,12:33:123,0,255	0/0:21,0:22:0,64,255	0/1:7,17:25:240,0,52
-chr21	46470764	chr21:46470764:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/0:14,0:15:0,44,251	0/1:13,5:18:36,0,178
-chr21	46476080	chr21:46476080:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,28:32:255,39,0	1/1:0,31:33:255,96,0	1/1:1,25:29:255,66,0
-chr21	46476243	chr21:46476243:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:2,30:33:255,61,0	0/1:20,16:37:185,0,255
-chr21	46476653	chr21:46476653:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:8:181,47,32,91,0,69	2/2:0,0,4:5:71,62,59,12,4,0	0/2:6,0,4:12:41,52,217,0,106,86
-chr21	46477544	chr21:46477544:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,8:14:255,195,177,149,0,125	2/2:0,0,3:3:85,85,85,9,9,0	1/2:0,4,1:6:122,24,10,98,0,95
-chr21	46477741	chr21:46477741:M	TTTTTTTGTTTTGTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,13:13:255,39,0	0/1:10,10:20:213,0,214
-chr21	46480058	chr21:46480058:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13,2:16:255,42,0,253,10,213	2/2:2,2,17:23:255,230,255,27,18,0	0/1:8,6,0:15:135,0,190,113,141,218
-chr21	46485237	chr21:46485237:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:38,1:39:0,96,255	0/0:32,2:34:0,64,255	0/1:16,27:43:255,0,172
-chr21	46492932	chr21:46492932:M	AAAAAAAAAAGGAAGAAAAAAAAAA	<24>,<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,17,10:28:255,255,255,195,196,117,255,255,0,237	3/3:0,0,2,15:18:255,255,255,255,255,241,48,53,17,0	1/2:1,14,18,0:33:255,255,255,236,0,255,255,255,255,255
-chr21	46496071	chr21:46496071:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:33,6,0	1/1:0,1:1:16,3,0	1/1:0,6:6:99,17,0
-chr21	46502303	chr21:46502303:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:34:0,99,255	0/0:36,0:36:0,106,255	0/1:12,18:30:248,0,136
-chr21	46503326	chr21:46503326:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7:10:120,9,0	1/1:0,12:14:225,40,0	0/1:6,5:13:71,0,68
-chr21	46503572	chr21:46503572:M	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<8.8>,<12.8>	.	.	Motif=CTTC	GT:AD:DP:PL	1/2:0,0,1:2:33,21,22,15,0,12	2/2:0,0,3:3:64,71,84,9,9,0	1/1:0,5,0:8:111,15,0,124,15,161
-chr21	46506725	chr21:46506725:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTCTTTCTTCTCTTT	<14.5>,<18>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,10,2:15:255,94,65,255,0,250	2/2:0,0,18:18:255,255,255,54,54,0	1/1:0,8,0:10:218,11,0,222,24,236
-chr21	46506805	chr21:46506805:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:8,2:12:5,0,107	0/1:6,10:17:126,0,65
-chr21	46508043	chr21:46508043:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,7:19:73,0,165	0/0:25,1:27:0,61,255	0/1:18,6:24:37,0,254
-chr21	46508354	chr21:46508354:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	1/1:0,2:3:44,9,0	0/1:3,4:8:47,0,31
-chr21	46510628	chr21:46510628:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,6:8:102,122,210,6,24,0	2/2:0,0,6:8:126,143,206,23,24,0	1/2:1,4,6:13:202,86,157,117,0,113
-chr21	46512801	chr21:46512801:M	AAAAAAAAAAACAAACAAAACAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,18:33:255,0,231	1/1:0,29:37:255,100,0	0/0:46,0:46:0,138,255
-chr21	46514436	chr21:46514436:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:27:0,60,255	0/0:25,0:25:0,73,255	0/1:11,14:25:180,0,126
-chr21	46515453	chr21:46515453:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,85,255	0/0:29,0:30:0,88,255	0/1:26,20:47:224,0,255
-chr21	46523394	chr21:46523394:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,2:7:38,0,122	1/1:0,5:5:138,15,0	0/0:1,0:3:0,6,40
-chr21	46524873	chr21:46524873:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:14:255,37,0	1/1:0,4:4:107,12,0	1/1:0,5:5:146,15,0
-chr21	46525864	chr21:46525864:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>,<15>,<17>	.	.	Motif=ATT	GT:AD:DP:PL	2/3:0,1,14,6:21:255,255,255,159,139,112,255,237,0,255	3/3:0,0,0,5:5:146,146,146,144,144,141,15,15,15,0	1/2:0,8,8,0:16:255,144,98,144,0,98,255,144,144,255
-chr21	46527326	chr21:46527326:M	TTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:145,18,0	1/1:0,8:9:250,27,0	1/1:0,0:2:22,5,0
-chr21	46528528	chr21:46528528:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:142,18,0	1/1:0,3:3:77,9,0	.
-chr21	46529606	chr21:46529606:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,13:31:156,0,220	1/1:0,24:24:255,70,0	0/0:36,1:41:0,99,255
-chr21	46536904	chr21:46536904:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,66,0	1/1:1,19:20:255,41,0	0/1:15,16:32:193,0,185
-chr21	46538371	chr21:46538371:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/1:18,20:38:255,0,236	0/0:24,0:24:0,71,255	0/1:29,15:44:152,0,255
-chr21	46547657	chr21:46547657:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:153,26,0	1/1:0,3:4:60,11,0	0/1:2,0:5:12,0,34
-chr21	46548175	chr21:46548175:M	TGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,12:16:255,0,61	1/1:1,15:16:255,21,0	0/0:20,0:21:0,63,255
-chr21	46569484	chr21:46569484:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,17:30:231,0,122	0/0:23,0:25:0,70,255	0/1:25,17:48:197,0,255
-chr21	46587158	chr21:46587158:M	AAAAACAAAAACAAAAACAA	<2.3>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,53:53:255,156,0	1/1:0,52:52:255,154,0
-chr21	46589944	chr21:46589944:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,19:40:255,0,236	0/0:23,3:27:0,26,255	0/1:17,18:36:233,0,203
-chr21	46599781	chr21:46599781:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:35:255,0,172	0/0:37,0:37:0,109,255	0/1:31,22:53:252,0,255
-chr21	46611501	chr21:46611501:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:3,0:6:0,13,62	1/1:0,3:5:50,9,0
-chr21	46616504	chr21:46616504:M	TGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:13,26:39:255,0,185	0/0:13,1:14:0,19,255	0/1:7,21:28:255,0,78
-chr21	46616522	chr21:46616522:M	TATATATATATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,24:37:255,72,0	0/0:0,0:6:0,6,21	1/1:0,19:27:255,49,0
-chr21	46617772	chr21:46617772:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTAT	<12.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:9,13:23:255,0,190	1/1:0,41:41:255,123,0	0/1:6,19:25:255,0,92
-chr21	46632747	chr21:46632747:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,19:34:252,0,178	0/1:5,28:38:255,0,1	0/1:18,12:31:127,0,245
-chr21	46641124	chr21:46641124:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:9:220,24,0	1/1:0,4:6:111,12,0	1/1:0,11:11:255,33,0
-chr21	46641720	chr21:46641720:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,31:33:255,98,0	1/1:0,30:31:255,93,0	1/1:0,27:28:255,84,0
-chr21	46643476	chr21:46643476:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:16:244,29,0	0/1:2,7:11:94,0,12	0/1:2,6:8:80,0,11
-chr21	46645092	chr21:46645092:M	AAAAAAAAAATTAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10:23:122,0,166	0/0:37,0:37:0,109,255	0/1:21,10:31:94,0,255
-chr21	46645267	chr21:46645267:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,28:43:255,255,255,188,0,82	2/2:4,0,35:39:255,255,255,54,111,0	1/2:0,13,29:43:255,255,255,196,0,77
-chr21	46657377	chr21:46657377:M	AAAAAAAAAAAAAACAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,21:42:255,0,229	0/0:25,0:28:0,81,255	0/1:20,17:38:188,0,251
-chr21	46666304	chr21:46666304:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,16:23:233,0,62	0/0:30,1:31:0,74,255	0/1:6,6:13:82,0,72
-chr21	46668752	chr21:46668752:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,20,20:41:255,255,255,255,0,255	1/1:0,38,0:38:255,114,0,255,112,255	1/2:1,24,26:51:255,255,255,255,0,255
-chr21	46675495	chr21:46675495:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:209,22,0	1/1:0,15:15:255,44,0	1/1:1,17:18:255,35,0
-chr21	46676397	chr21:46676397:M	TTTTTTTTTTTTTCTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,13:25:170,0,116	1/1:0,19:20:255,59,0	0/1:16,10:26:100,0,203
-chr21	46688832	chr21:46688832:M	ACACACACACACACACACACACACACACACACA	<12.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,10:31:255,144,193,255,0,255	1/2:0,30,4:35:255,56,9,255,0,255	1/2:0,29,11:42:255,159,194,255,0,255
-chr21	46699291	chr21:46699291:M	CGCGCCGCGCC	<3.2>	.	.	Motif=CGCGC	GT:AD:DP:PL	0/0:20,0:20:0,56,255	0/0:61,3:64:0,140,255	0/1:1,3:4:28,0,2
diff --git a/trtools/mergeSTR/tests/mydir/test_PopSTRRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_PopSTRRightFilecurrent
deleted file mode 120000
index f0d9bce6..00000000
--- a/trtools/mergeSTR/tests/mydir/test_PopSTRRightFilecurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_PopSTRRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0/test.vcf b/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0/test.vcf
deleted file mode 100644
index f2b55045..00000000
--- a/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0/test.vcf
+++ /dev/null
@@ -1,28 +0,0 @@
-##fileformat=VCFv4.1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0358_BXD40_TyJ_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0358_BXD40_TyJ/res_chr1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr1,length=182113224>
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
-##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
-##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
-##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
-##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
-##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
-##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
-##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
-##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
-##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
-##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
-##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	BXD196_0366	BXD40_TyJ_0358
-chr1	3004986	.	TCTGTCTGTCTG	.	.	.	END=3004997;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999912:3,3:3-3,3-3:17,12,0,2:3,17:2,2:193.56:366.612,131.36:0.0,0.0:0.0,5.1188e-05,0.999949	0/0:10:0.888534:3,3:3-3,3-3:6,4,0,0:3,6:NULL:61.3218:326.675,113.385:0.0,0.0:4.48253e-20,0.0502949,0.949783
-chr1	3005549	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3005568;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:181.959:366.612,131.36:0.0,0.0:0.0,8.11654e-06,0.999994	0/0:15:0.997039:4,4:4-4,4-4:12,3,0,0:4,12:NULL:73.0332:326.675,113.385:0.0,0.0:1.26878e-38,0.00169958,0.998307
diff --git a/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigscurrent b/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigscurrent
deleted file mode 120000
index fe9120e4..00000000
--- a/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigscurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_RecordChromsNotInContigs0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0/test.vcf b/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0/test.vcf
deleted file mode 100644
index 6d37b92a..00000000
--- a/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0/test.vcf
+++ /dev/null
@@ -1,341 +0,0 @@
-##fileformat=VCFv4.1
-##command=HipSTR-v0.6.1 --bam-files /pedigree/projects/s1saini/hipstr.1kg/bam.afr.list --fasta /pedigree/projects/s1saini/ref/human_g1k_v37.fasta --regions bedfile.10 --str-vcf str.chr21.10.vcf.gz --bam-samps HG02561,HG02562,HG02620,HG02621,HG02721,HG02722,HG02768,HG02769,HG02771,HG02772,HG02851,HG02852,HG02973,HG02974,HG02982,HG02983,HG03039,HG03040,HG03063,HG03064,HG03069,HG03096,HG03097,HG03099,HG03100,HG03120,HG03121,HG03129,HG03130,HG03168,HG03169,HG03246,HG03247,HG03300,HG03301,HG03306,HG03307,HG03445,HG03451,HG03452,HG03484,HG03485,HG03520,HG03521,HG03574,HG03575,HG03577,HG03578,HG03582,HG03583 --lib-from-samp --log log.part10.txt
-##command=HipSTR-v0.6.1 --bam-files /pedigree/projects/s1saini/hipstr.1kg/bam.afr.list --fasta /pedigree/projects/s1saini/ref/human_g1k_v37.fasta --regions bedfile.10 --str-vcf str.chr21.10.vcf.gz --bam-samps HG02561,HG02562,HG02620,HG02621,HG02721,HG02722,HG02768,HG02769,HG02771,HG02772,HG02851,HG02852,HG02973,HG02974,HG02982,HG02983,HG03039,HG03040,HG03063,HG03064,HG03069,HG03096,HG03097,HG03099,HG03100,HG03120,HG03121,HG03129,HG03130,HG03168,HG03169,HG03246,HG03247,HG03300,HG03301,HG03306,HG03307,HG03445,HG03451,HG03452,HG03484,HG03485,HG03520,HG03521,HG03574,HG03575,HG03577,HG03578,HG03582,HG03583 --lib-from-samp --log log.part10.txt
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=1,length=249250621>
-##contig=<ID=2,length=243199373>
-##contig=<ID=3,length=198022430>
-##contig=<ID=4,length=191154276>
-##contig=<ID=5,length=180915260>
-##contig=<ID=6,length=171115067>
-##contig=<ID=7,length=159138663>
-##contig=<ID=8,length=146364022>
-##contig=<ID=9,length=141213431>
-##contig=<ID=10,length=135534747>
-##contig=<ID=11,length=135006516>
-##contig=<ID=12,length=133851895>
-##contig=<ID=13,length=115169878>
-##contig=<ID=14,length=107349540>
-##contig=<ID=15,length=102531392>
-##contig=<ID=16,length=90354753>
-##contig=<ID=17,length=81195210>
-##contig=<ID=18,length=78077248>
-##contig=<ID=19,length=59128983>
-##contig=<ID=20,length=63025520>
-##contig=<ID=21,length=48129895>
-##contig=<ID=22,length=51304566>
-##contig=<ID=X,length=155270560>
-##contig=<ID=Y,length=59373566>
-##contig=<ID=MT,length=16569>
-##contig=<ID=GL000207.1,length=4262>
-##contig=<ID=GL000226.1,length=15008>
-##contig=<ID=GL000229.1,length=19913>
-##contig=<ID=GL000231.1,length=27386>
-##contig=<ID=GL000210.1,length=27682>
-##contig=<ID=GL000239.1,length=33824>
-##contig=<ID=GL000235.1,length=34474>
-##contig=<ID=GL000201.1,length=36148>
-##contig=<ID=GL000247.1,length=36422>
-##contig=<ID=GL000245.1,length=36651>
-##contig=<ID=GL000197.1,length=37175>
-##contig=<ID=GL000203.1,length=37498>
-##contig=<ID=GL000246.1,length=38154>
-##contig=<ID=GL000249.1,length=38502>
-##contig=<ID=GL000196.1,length=38914>
-##contig=<ID=GL000248.1,length=39786>
-##contig=<ID=GL000244.1,length=39929>
-##contig=<ID=GL000238.1,length=39939>
-##contig=<ID=GL000202.1,length=40103>
-##contig=<ID=GL000234.1,length=40531>
-##contig=<ID=GL000232.1,length=40652>
-##contig=<ID=GL000206.1,length=41001>
-##contig=<ID=GL000240.1,length=41933>
-##contig=<ID=GL000236.1,length=41934>
-##contig=<ID=GL000241.1,length=42152>
-##contig=<ID=GL000243.1,length=43341>
-##contig=<ID=GL000242.1,length=43523>
-##contig=<ID=GL000230.1,length=43691>
-##contig=<ID=GL000237.1,length=45867>
-##contig=<ID=GL000233.1,length=45941>
-##contig=<ID=GL000204.1,length=81310>
-##contig=<ID=GL000198.1,length=90085>
-##contig=<ID=GL000208.1,length=92689>
-##contig=<ID=GL000191.1,length=106433>
-##contig=<ID=GL000227.1,length=128374>
-##contig=<ID=GL000228.1,length=129120>
-##contig=<ID=GL000214.1,length=137718>
-##contig=<ID=GL000221.1,length=155397>
-##contig=<ID=GL000209.1,length=159169>
-##contig=<ID=GL000218.1,length=161147>
-##contig=<ID=GL000220.1,length=161802>
-##contig=<ID=GL000213.1,length=164239>
-##contig=<ID=GL000211.1,length=166566>
-##contig=<ID=GL000199.1,length=169874>
-##contig=<ID=GL000217.1,length=172149>
-##contig=<ID=GL000216.1,length=172294>
-##contig=<ID=GL000215.1,length=172545>
-##contig=<ID=GL000205.1,length=174588>
-##contig=<ID=GL000219.1,length=179198>
-##contig=<ID=GL000224.1,length=179693>
-##contig=<ID=GL000223.1,length=180455>
-##contig=<ID=GL000195.1,length=182896>
-##contig=<ID=GL000212.1,length=186858>
-##contig=<ID=GL000222.1,length=186861>
-##contig=<ID=GL000200.1,length=187035>
-##contig=<ID=GL000193.1,length=189789>
-##contig=<ID=GL000194.1,length=191469>
-##contig=<ID=GL000225.1,length=211173>
-##contig=<ID=GL000192.1,length=547496>
-##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
-##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
-##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
-##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
-##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
-##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
-##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
-##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
-##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
-##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
-##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
-##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
-##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
-##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
-##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
-##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
-##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
-##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
-##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
-##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
-##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
-##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
-##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
-##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
-##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
-##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	HG02561	HG02562
-21	9412359	STR_868537	AAAAAAAAAAAA	AAAAAAAAAAAC,AAAAAAAAAAAAA,AAAAAAAAAAAAC	.	.	START=9412359;END=9412370;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|1:1.0:0.5:156:0:0|0:132.18|23.82:17.03:2:3:-21.15:0.0:140:0|115;1|18:0|111;1|16	0|3:0|1:1.0:0.5:129:0:0|0:92.19|36.81:38.68:3:3:-6.5:-0.17:120:-1|3;0|79;1|32:-1|3;0|71;1|27
-21	9416189	STR_868539	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	GTGTGTGTGTGTGTGTGTGTGTG,GTGTGTGTGTGTGTGTGTGTGTGTG,GTGTGTGTGTGTGTGTGTGTGTGTGTG,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	START=9416189;END=9416217;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9418366	STR_868540	CAAAAAAAACAAACAAACAAACAAAAACAAAACAAAACAAAA	CAAAAAAACAAACAAACAAACAAAAACAAAACAAAACAAAA,CAAAAAAAACAAACAAAGAAACAAAAACAAAACAAAACAAAA,CAAAACAAACAAACAAACAAACAAAAACAAAACAAAACAAAA,CAAAAAAAAACAAACAAACAAACAAAAACAAAACAAAACAAAA	.	.	START=9418366;END=9418407;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|1:0|-1:1.0:0.5:236:0:0|0:125.41|110.59:25.04:1:8:-0.58:-0.86:155:-1|47;0|59:-1|47;0|55
-21	9421431	STR_868541	TTTTTTTTTTTTTTT	TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,GTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT	.	.	START=9421431;END=9421445;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-3:1.0:0.5:224:0:0|0:126.03|97.97:17.33:113:4:-1.29:-0.65:222:-26|1;-15|3;-5|1;-3|23;-2|50;0|35;1|28;2|11;3|18:-5|1;-3|21;-2|42;0|31;1|24;2|10;3|16	0|1:0|-3:1.0:0.5:185:0:0|0:104.84|80.16:3.65:68:7:-1.14:-0.54:179:-15|1;-9|1;-5|7;-3|28;-2|29;0|32;1|13;3|18:-5|5;-3|26;-2|27;0|28;1|11;3|15
-21	9421591	STR_868542	TATTTTTTTTTTATTTTTATT	TATTTTTTTTAAAATTTTTATT,TATTTTTTTTTAAATTTTTATT,TATTTTTTTTTTAATTTTTATT	.	.	START=9421591;END=9421611;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|1:1.0:0.5:173:0:0|0:94.00|79.00:127.9:0:1:-0.54:0.0:173:0|57;1|38;12|1:0|58;1|40	0|1:0|1:1.0:0.5:151:0:0|0:96.00|55.00:59.55:0:0:-2.97:-0.4:151:-1|1;0|47;1|29:0|48;1|29
-21	9422104	STR_868543	TAATAATAATAATAA	TAATAATAAAAA,TAATAATAAAAAA,TAATAATAATAATA,TAATAATAATAAAAA	.	.	START=9422104;END=9422118;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9422279	STR_868544	AAAAAAAAAAA	AAAAAAAAAA,AAAAAGAAAA	.	.	START=9422279;END=9422289;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|-1:1.0:0.5:202:0:0|0:161.83|40.17:108.38:20:1:-19.15:-2.63:190:-1|45;0|118;1|1:-1|43;0|106;1|1	0|2:0|-1:1.0:0.5:148:0:0|0:96.63|51.37:94.87:14:3:-3.76:-1.8:146:-1|51;0|68:-1|51;0|60
-21	9424692	STR_868545	AAAAAAATAAAAAAA	.	.	.	START=9424692;END=9424706;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:224:0:0|0:112.00|112.00:.:0:0:0.0:0.0:-2147483648:0|182:0|172	0|0:0|0:1.0:1.0:217:0:0|0:108.50|108.50:.:0:2:0.0:0.0:-2147483648:0|178:0|164
-21	9431463	STR_868548	TTTTTTTTTCTTTTTTTTT	TTTTTTTTTTCTTTTTTTTT,TTTTTTTTTTTCTTTTTTTTT,TTTTTTTTTTTTCTTTTTTTTT	.	.	START=9431463;END=9431481;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|1:1.0:0.5:276:0:0|0:135.26|140.74:14.26:58:6:-3.3:-0.11:200:-24|1;0|64;1|63;2|12;3|32:0|57;1|56;2|12;3|28	0|2:0|2:1.0:0.5:226:0:0|0:102.77|123.23:5.27:91:4:-1.42:0.0:183:-1|1;0|24;1|39;2|57;3|32:0|22;1|38;2|52;3|31
-21	9434394	STR_868549	AATAAATAAATAAATAAATAAATAAATAAATAAATA	AAAAAATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATA,AAAAAATAAATAAATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATAAATA,AAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	START=9434394;END=9434429;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|4:4|4:1.0:0.5:229:0:0|0:61.18|167.82:6.59:73:4:-12.87:-0.06:226:-20|1;-12|1;-11|1;-9|1;-8|1;-4|24;-2|1;0|34;4|41:-4|22;0|34;4|39	0|4:0|4:1.0:0.5:221:0:0|0:124.66|96.34:11.05:60:11:-2.15:0.0:170:-10|1;-9|2;-8|6;-4|34;0|39;4|26:-4|32;0|38;4|24
-21	9440656	STR_868550	AAAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAAAT	.	.	START=9440656;END=9440673;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|2:-2|-3:1.0:0.5:250:0:0|0:159.33|90.67:25.37:139:19:-5.33:-0.05:237:-11|1;-10|2;-5|36;-4|9;-3|43;-2|1;-1|26;0|36;1|24;2|1;7|4:-5|33;-4|9;-3|38;-2|1;-1|25;0|28;1|20	4|2:-1|-3:1.0:0.5:195:0:0|0:119.53|75.47:10.94:91:15:-2.84:-0.45:184:-17|1;-7|1;-4|58;-3|26;-2|1;-1|19;0|36;2|1;6|1:-4|55;-3|22;-2|1;-1|15;0|30
-21	9440894	STR_868551	AAAAAAAAAAAAA	AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAACAAAA	.	.	START=9440894;END=9440906;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|3:-2|1:1.0:0.5:210:0:0|0:104.83|105.17:4.37:58:14:-0.0:-0.19:165:-7|1;-4|6;-3|15;-2|58;-1|1;0|51;1|34:-4|5;-3|7;-2|58;0|41;1|33	1|3:-2|1:1.0:0.5:156:0:0|0:80.08|75.92:2.73:33:19:0.0:-0.24:118:-4|6;-3|11;-2|49;0|26;1|27;2|3:-4|2;-3|3;-2|44;0|22;1|23;2|3
-21	9446074	STR_868553	GTTTTGTTTTGTTTCGTTTTGTTTT	GTTTTGTTTTGTTTTGTTTTGTTTT,GTTTTGTTTTGTTTTGTTTTGTTTTTT	.	.	START=9446074;END=9446098;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|1:0|0:1.0:0.5:261:0:0|0:100.06|160.94:239.55:60:33:-7.92:-0.91:233:-11|2;-5|22;-3|1;0|106;1|13;4|12;5|18:-10|14;-5|22;0|114;5|19
-21	9446819	STR_868554	TCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC,TTTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTC	.	.	START=9446819;END=9446836;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9447407	STR_868555	GTGTGTGTCTGTGTGTGTGAGAGAGTGTGTGGTTTGTGTGT	GTGTATGTCTGTGGTTGTGAGAGAGTGTGTGGTTTGTGTGT,GTGTGTGTCTCTGTGTGTGAGAGAGTGTGTGGTTTGTGTGT	.	.	START=9447407;END=9447447;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|1:0|0:1.0:0.5:269:0:0|0:198.24|70.76:27.6:38:33:-19.55:-2.09:213:-2|10;0|120;2|44:0|105;2|27
-21	9447829	STR_868556	ATATATATATATATATATA	ATATATATATATATATA,ATATATATATATATATATATA,ATATATATATATATATATATATA,ATATATATATATATATATATATATATATATATATA,GTGTATATATATATATATATATATATATATATATA	.	.	START=9447829;END=9447847;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|5:4|16:1.0:0.5:155:0:0|0:111.24|43.76:26.36:90:13:-8.99:0.0:123:-32|4;-16|2;-8|1;-6|5;-1|1;0|22;2|10;4|16;6|15;8|21;10|1;12|5;20|10;22|1;28|2:0|16;2|9;4|14;6|14;8|20;10|2;12|5;20|11;22|1	.
-21	9448254	STR_868557	AAAAAAAAAAAAAAAAA	.	.	.	START=9448254;END=9448270;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9449020	STR_868558	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAGAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAATATATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAATATATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATA	.	.	START=9449020;END=9449052;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9454717	STR_868559	TATATATATATATATATAT	TATATATATAT,TATATATATATAT,TATATATATATATAT,TATATATATATATATAT,TGTATATATATATATAT,TATATATATATATATATATAT,TGTATATATATATATATATAT,TATATATATATATATATATATAT,TATATATATATATATATATATATAT	.	.	START=9454717;END=9454735;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	2|3:-6|-4:1.0:0.5:221:0:0|0:152.68|68.32:15.23:110:18:-9.83:-0.06:187:-49|3;-28|1;-24|2;-8|12;-6|58;-4|22;-2|23;0|48;20|1:-8|12;-6|60;-4|20;-2|22;0|44
-21	9456783	STR_868560	TAAAAATAAAAATAAAAA	.	.	.	START=9456783;END=9456800;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:368:0:0|0:184.00|184.00:.:14:42:0.0:0.0:-2147483648:-6|14;-1|5;0|238:-6|14;0|213	0|0:0|0:1.0:1.0:290:0:0|0:145.00|145.00:.:8:42:0.0:0.0:-2147483648:-6|5;-1|7;0|187:-6|8;0|158
-21	9464424	STR_868561	TGTGTGTGGGTGTGTGCGTGTGT	TGTGTGTGGGTGTGGGCGTGTGT,TGTGTGTGGGTGTGTGCTTGTGT	.	.	START=9464424;END=9464446;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:294:0:0|0:144.83|149.17:112.29:0:11:0.0:0.0:-2147483648:0|213:0|199	0|0:0|0:1.0:1.0:299:0:0|0:136.38|162.62:30.5:0:14:0.0:0.0:-2147483648:0|212:0|186
-21	9466444	STR_868562	AAAAAAAAAAAAAA	AAAAAAAAAAAA,AAAATAAAAAAA,AAAATATAAAAA,AAAAAAAAAAAAA	.	.	START=9466444;END=9466457;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|4:-2|-1:1.0:0.5:347:0:0|0:99.91|247.09:36.06:108:49:-15.82:-0.37:299:-13|1;-4|22;-3|30;-2|108;-1|71;0|47:-4|22;-3|22;-2|86;-1|73;0|35	3|4:-2|-1:1.0:0.5:283:0:0|0:96.02|186.98:14.66:106:39:-8.92:-0.48:240:-13|1;-5|1;-4|29;-3|6;-2|107;-1|31;0|53;2|1:-5|1;-4|26;-3|6;-2|85;-1|35;0|39
-21	9467572	STR_868563	ACACACACACACA	ATACACACACACA,ATACACACCCACA,ATACACACACACACA,ATACACACACACACACA	.	.	START=9467572;END=9467584;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|1:0|0:1.0:1.0:255:0:0|0:153.33|101.67:40.13:93:36:0.0:0.0:-2147483648:-19|1;-12|1;-2|4;0|188;2|2;4|16;8|1:-2|4;0|113;2|54;4|20	.
-21	9471184	STR_868564	TTTTTTTTTTTTT	TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT	.	.	START=9471184;END=9471196;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|-2:1.0:0.5:178:0:0|0:60.21|117.79:10.28:23:14:-7.66:-0.15:140:-5|4;-3|1;-2|89;-1|17;0|33;1|3:-4|3;-2|80;-1|13;0|30;1|2	.
-21	9472552	STR_868565	TTTTTCTTTTTTTTTTTTTTTTTTTT	TTTTTCTTTCTTTTTTTTTTT,TTTTTCTTTCTTTTTTTTTTTT,TTTTTCTTTCTTTTTTTTTTTTT,TTTTTCTTTTTTTTTTTTTTTTT,TTTTTCTTTCTTTTTTTTTTTTTT,TTTTTCTTTTTTTTTTTTTTTTTTT,TTTTTCTTTTCTTTTTTTTTTTTTTT,TTTTTCTTTTTCTTTTTTTTTTTTTTT	.	.	START=9472552;END=9472577;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|7:-3|0:1.0:0.5:202:0:0|0:114.88|87.12:10.27:107:7:-1.55:0.0:152:-7|1;-5|3;-4|54;-3|42;-2|4;0|19;3|1:-5|3;-4|49;-3|34;-2|3;-1|1;0|17	0|2:0|-4:1.0:0.5:166:0:0|0:63.10|102.90:15.13:38:12:-3.12:-0.23:129:-8|2;-7|1;-4|42;-3|14;-2|16;-1|1;0|23:-4|36;-3|10;-2|12;0|19
-21	9473251	STR_868566	GAAGGAAGGAAATAAGGAAGGAAGGAAGGAA	.	.	.	START=9473251;END=9473281;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:162:0:0|0:81.00|81.00:.:1:13:0.0:0.0:-2147483648:-16|1;-1|1;0|99;4|1:0|90
-21	9473327	STR_868567	GGAGGGAGGGAGGGAGGAAGGGAG	AGAGGGAGGGAGGGAGGAAGGGAG	.	.	START=9473327;END=9473350;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:179:0:0|0:89.50|89.50:43.17:4:24:0.0:0.0:-2147483648:-27|1;-20|1;-13|1;-11|1;-7|1;-4|1;0|111:-4|2;0|106	.
-21	9473387	STR_868568	AAGAAAGAATGAAAGAAAGAGAAAGAAAGGGAAAGAGAAAGAAAGAAAG	AAGAAAGAATGAAAGAAAGAAAGAAAGGGAAAGAGAAAGAAAGAAAG,AAGAAAGAAAGAAAGAAAGAGAAAGAAAGGGAAAGAGAAAGAAAGAAAG,AAGAAAGAAAGAAAGAATGAAAGAAAGAGAAAGAAAGAGGGAAAGAGAAAGAAAG,AAGAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAGGGAAAGAGAAAGAAAG,AAGAAAGAAAGAAAGAAAGAATGAAAGAAAGAGAAAGAAAGAGGGAAAGAGAAAGAAAG	.	.	START=9473387;END=9473435;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9473512	STR_868569	GGAAGGAAGGAAAAAGAGGAAAGGAAGGGAGGGAGGAAGGAAG	GGAAGGAAGGAAAAAGAGGAAAGGAAGGAGGGAGGAAGGAAG,GGAAGGAAGGAAAAAGAGGAAAGGAAGGGAGGAAGGAAGGAAG,GGAATGAAGGAAAAAGAGGAAAGGAAGGGAGGGAGGAAGGAAG	.	.	START=9473512;END=9473554;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9473577	STR_868570	AGAAAAAAGGAAAGAAAGCAAGAACGTGAGAAAGAAAGAAA	.	.	.	START=9473577;END=9473617;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9476998	STR_868571	ATAATAATAATAATA	ATAATAATAACA,ATAATAATAATAACA,ATAATAATAATGATA	.	.	START=9476998;END=9477012;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|0:0|0:1.0:0.5:182:0:0|0:103.63|78.37:135.1:4:6:-1.21:-0.13:152:-6|1;-3|1;0|122;3|2:-6|1;-3|1;0|115;3|1	1|3:-3|0:1.0:0.5:154:0:0|0:52.21|101.79:38.11:2:18:-5.54:-0.08:127:-9|2;-6|2;-3|31;0|79;3|3:-3|28;0|68
-21	9477945	STR_868572	AAAAAAAAAAA	AAAAAAAAAT,AAAAAGAAAAAATT	.	.	START=9477945;END=9477955;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-1|3:1.0:0.5:207:0:0|0:167.13|39.87:173.85:88:8:-19.77:-2.79:202:-1|64;0|41;1|25;2|21;3|30:-1|61;0|36;1|22;2|20;3|30	.
-21	9479232	STR_868573	AAAAAAAAAAA	AAAAAAAAAA,TAAAAAAAAAA	.	.	START=9479232;END=9479242;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9479299	STR_868574	GGGGGGGGGGGGG	GTGGGGGGGG,GTGTGGGGGG,GTGGGGGGGGG,GAGGGGGGGGGG,GGGGGGGGGGGG,GTGGGGGGGGGG,GAGGGGGGGGGGG,GAGGGGGGGGGGGG,GAGGGGGGGGGGGGG	.	.	START=9479299;END=9479311;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	5|2:-1|-3:1.0:0.5:126:0:0|0:45.08|80.92:14.31:41:1:-2.92:-0.24:125:-7|3;-5|1;-3|59;-2|6;-1|13;0|35:-3|59;-2|5;-1|13;0|30
-21	9485114	STR_868576	ATTTATTTATGTATTTATTT	.	.	.	START=9485114;END=9485133;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:247:0:0|0:123.50|123.50:.:0:0:0.0:0.0:-2147483648:0|173:0|168	0|0:0|0:1.0:1.0:183:0:0|0:91.50|91.50:.:0:1:0.0:0.0:-2147483648:0|130:0|128
-21	9487194	STR_868577	GAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	START=9487194;END=9487219;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-6:1.0:0.5:240:0:0|0:98.85|141.15:2.7:95:9:-2.5:-0.19:185:-23|2;-6|57;-4|33;-2|22;0|26;2|29;4|4;8|2;10|1;12|1:-6|57;-4|32;-2|22;0|22;2|29;4|1;6|1	0|1:0|-6:1.0:0.5:205:0:0|0:92.70|112.30:37.0:60:4:-0.56:-0.36:167:-14|1;-6|52;-4|31;-2|5;0|49;2|21;8|2:-6|50;-4|32;-2|5;0|44;2|20;6|1
-21	9488851	STR_868578	AATAATAATAATAATCATCATCATAATAA	AATAATAATAATAATAA,AATAATAATAATAATAATAA,AATAATAATAATCATCATCATAATAA,AATAATAATAATAATAATCATCATAATAA,AATAATAATAATAATAATAATAATAATAATA	.	.	START=9488851;END=9488879;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9489767	STR_868579	TATGTATATATGTATGTAT	TATGTATATATGTATGTAC	.	.	START=9489767;END=9489785;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:92:0:0|0:79.49|12.51:7.14:0:0:-14.5:-1.89:81:0|69:0|68	0|0:0|0:1.0:1.0:91:0:0|0:45.50|45.50:18.37:0:2:0.0:0.0:-2147483648:0|66:0|63
-21	9489871	STR_868580	ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTTATATATAAATATTATATATATATTATATATATATATAT	ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTTATATATAAATATTATAATATATATTATATATATATAT,ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTATATATAAATATTATATTATATATTATATATATATATAT,ATATATAATATATATTATATATTTGTATATAATTTATATATATAATATATATTATATATAAATATTATATTATATATTATATATATATATAT,ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTTATATATAAATATTATAATATATATTATATATATATATAT,ATATATAATATATATTATATATTTATATATAATTTATATATATAATATATATTATATATTATATATAAATATTATATATATATTATATATATATATAT,ATATATAATATATATTATATGTTTATATATAATTTATATATATAATATATATTATATATTATATATAAATATTATATATATATTATATATATATATAT,ATATATGATATATATTATATATTTATATATAATTTATATATATAATATATATTATATATTATATATAAATATTATATATATATTATATATATATATAT,ATATATAATATATATTATATATTTATATATAATTTATATATATAACATATATTATATATTATATATAAATATTATATATATATTATATATATATATATATAT	.	.	START=9489871;END=9489962;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9500096	STR_868581	ATAATAATAATAATAATAATAA	ACAATAATAATAATAATAA,ATAATAATAATAATAATAA,ACAATAATAATAATAATAATAA	.	.	START=9500096;END=9500117;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-3|-3:1.0:0.5:129:0:0|0:19.99|109.01:13.47:8:2:-15.29:-3.69:129:-9|2;-3|93;0|6:-3|91;0|5	1|2:-3|-3:0.98:0.49:81:0:0|0:16.54|64.46:1.7:7:1:-7.23:-3.04:80:-3|52;0|7:-3|51;0|6
-21	9501362	STR_868582	CATTCATTCATTTACTTGTTCATTCATTCATT	CATTCATTCATTTACTCGTTCATTCATTCATT	.	.	START=9501362;END=9501393;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:213:0:0|0:69.25|143.75:175.51:0:1:-7.63:-0.73:176:0|129:0|127	0|1:0|0:1.0:0.5:195:0:0|0:89.57|105.43:271.29:0:3:-0.63:-0.37:158:0|118:0|114
-21	9501849	STR_868583	ATATATATATATATA	AATATATA,TATATATA,AATATATATA,TATATATATATA,AATATATATATATA,AAATATATATATATA,AAATATATATATATATA,ATATATATATATATATA	.	.	START=9501849;END=9501863;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9502317	STR_868584	TTCTCTTTCTCTTTCTCT	.	.	.	START=9502317;END=9502334;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:109:0:0|0:78.31|30.69:69.94:0:1:-6.14:-5.93:94:0|81:0|81	0|0:0|0:1.0:0.5:96:0:0|0:68.52|27.48:58.03:0:3:-5.25:-2.34:81:0|73:0|70
-21	9504302	STR_868585	TATATATAATATATATA	.	.	.	START=9504302;END=9504318;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:181:0:0|0:130.99|50.01:127.47:1:1:-9.81:-0.23:163:0|146;2|1:0|136;2|1	0|0:0|0:1.0:0.5:148:0:0|0:104.56|43.44:119.98:0:0:-7.09:-1.08:134:0|116:0|112
-21	9507278	STR_868586	TATATATATAAAATATATATATATATATATA	TATATATATAATATATATATATA,TATATATATAATATATATATATATATA,TATATATATAATATATATATATATATATA,TATATATATAAAATATATATATATATATATATA,TATATATATAATATATATATATATATATATATA,TATATATAAAAAAAAAAATATATATATATATATA,TATATATATAAAATATATATATATATATATATATA,TATATATATAAAATATATATATATATATATATATATATA,TATATATATAAAATATATATATATATATAATATATATATATATATATA,TATATATATAAAATATATATATATATATAATATATATATATATATATATA,TATATATATAAAATATATATATATATATAATATATATATATATATATATATA,TATATATATAAAATATATATATATATATATAATATATATATATATATATATA	.	.	START=9507278;END=9507308;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9519022	STR_868587	AAATAAGTAAATAAATAAA	.	.	.	START=9519022;END=9519040;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:148:0:0|0:74.00|74.00:.:0:0:0.0:0.0:-2147483648:0|104:0|103	0|0:0|0:1.0:1.0:157:0:0|0:78.50|78.50:.:0:3:0.0:0.0:-2147483648:0|116:0|111
-21	9522213	STR_868588	ATTCATTCATTCATT	.	.	.	START=9522213;END=9522227;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:165:0:0|0:133.63|31.37:27.91:0:1:-19.67:-0.36:134:0|117:0|111	0|0:0|0:1.0:1.0:168:0:0|0:84.00|84.00:44.2:0:1:0.0:0.0:-2147483648:0|135:0|130
-21	9525447	STR_868589	AAAAAAAAAAAAAAAA	AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAT,AAAAAAAAAAAAAAAAAAAAT	.	.	START=9525447;END=9525462;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	8|2:4|1:1.0:0.5:127:0:0|0:32.43|94.57:3.88:46:8:-8.15:-0.84:124:-39|1;-15|2;-5|1;0|15;1|30;2|1;3|20;4|13;5|6;6|5:0|12;1|29;3|19;4|9;5|5;6|3	8|2:4|1:1.0:0.5:105:0:0|0:52.77|52.23:5.52:31:13:0.0:0.0:95:0|6;1|25;2|13;3|8;4|12;5|8;6|8;7|2;9|1:1|27;2|5;3|8;4|12;5|5;6|8
-21	9531860	STR_868590	ATAGACAGATAGATAGATAGATAGATAGATAAGGTAGATAG	ATAAACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAAACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGACAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAAGGTAGATAG,ATAAACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAAACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAAGGTAGATAG,ATAGACAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGGTAGATAGATAGATAGATGGATAAGGTAGATAG	.	.	START=9531860;END=9531900;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|7:24|32:1.0:0.5:198:0:0|0:65.58|132.42:9.99:54:3:-6.57:-0.13:164:-20|4;-12|28;-10|1;-8|1;-6|1;-2|7;-1|1;2|5;3|1;6|7;10|1;11|1;20|4;22|1;24|20;28|11;32|6;44|7;52|3:20|5;24|19;28|11;32|6;44|7	3|10:28|36:1.0:0.5:196:0:0|0:77.12|118.88:5.67:53:2:-2.83:-0.3:152:-20|1;-12|26;-6|1;-2|1;-1|1;2|4;3|2;6|6;8|1;10|1;14|1;19|1;24|11;28|5;32|29;36|13:24|10;28|5;32|28;36|12
-21	9534565	STR_868591	CACACACACACA	.	.	.	START=9534565;END=9534576;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:157:0:0|0:90.98|66.02:.:0:0:0.0:0.0:-2147483648:0|136:0|131	0|0:0|0:1.0:1.0:127:0:0|0:67.00|60.00:.:0:1:0.0:0.0:-2147483648:0|106:0|101
-21	9538504	STR_868592	TATATATAATATATTATATATATA	TATATATATTATATATATA	.	.	START=9538504;END=9538527;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:201:0:0|0:103.96|97.04:583.43:0:0:0.0:0.0:-2147483648:0|137:0|128	0|0:0|0:1.0:1.0:181:0:0|0:74.00|107.00:441.26:0:0:0.0:0.0:-2147483648:0|133:0|125
-21	9544183	STR_868593	TGGCTCTGGCCCTGGCTCTGGCCCTGCCCCTTGTCCTGACCCTGGTCCTG	TGGCTCTGGCCCTCGCTCTGGCCCTGCCCCTTGTCCTGACCCTGGTCCTG	.	.	START=9544183;END=9544232;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:183:0:0|0:137.87|45.13:24.64:0:8:-18.68:-0.11:123:-25|2;-12|1;-6|1;0|85:0|81	0|1:0|0:1.0:0.5:182:0:0|0:114.29|67.71:122.24:0:13:-4.71:-0.08:124:-23|1;0|80:0|78
-21	9544525	STR_868594	CTGGCCCTGGCCCTAGCCCTGGTCCTGCCATATCCCTGGCCCTGCCCT	CTGGCCCTGGCCCTAGCCCTGGTCCTGCCATATCCCTGGGCCTGCCCT	.	.	START=9544525;END=9544572;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:182:0:0|0:81.93|100.07:87.51:0:14:-0.9:-0.99:124:-17|1;0|75:0|66	0|0:0|0:1.0:0.5:178:0:0|0:95.71|82.29:201.92:0:14:-0.59:-0.8:132:-35|1;0|78:0|70
-21	9544687	STR_868595	GACCCAGACCCAGACCCA	GACCCAGACCCAGACCCT	.	.	START=9544687;END=9544704;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:171:0:0|0:138.48|32.52:26.4:0:12:-21.4:-0.94:141:-24|1;-7|1;0|121:0|117	0|1:0|0:1.0:0.5:138:0:0|0:116.34|21.66:12.49:0:3:-19.93:-1.62:117:-7|1;0|95:0|96
-21	9545239	STR_868596	TGCCCTGCCCTGCCCTGCCCTG	TGCCCTGCCCTGCCCTTCCCTG,TGCCCTGCCCTGCCCTGCCCTGCCCTG	.	.	START=9545239;END=9545260;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:136:0:0|0:59.39|76.61:89.04:1:19:0.0:0.0:-2147483648:-4|1;0|102;1|1;22|1:0|85
-21	9545402	STR_868597	TGGCCCTGCCCTGGACCTGTCCTGGCCCTGGCCCT	TGGCCCTGCCCTGGACCTGTCCTGGCCCTGGTCCT,TGGCCCTGCCCTGGACCTGTCTTGGCCCTGGCCCT	.	.	START=9545402;END=9545436;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:167:0:0|0:83.48|83.52:152.28:1:14:0.0:-0.07:118:-50|1;-25|2;-23|1;-18|1;-17|1;-12|1;0|86:-6|1;0|80	0|1:0|0:1.0:0.5:141:0:0|0:65.21|75.79:146.59:0:18:-0.52:0.0:95:-32|1;-23|1;-9|1;0|77;1|1;54|1;56|1:0|70
-21	9545695	STR_868598	GGCCGTGGCCGTGGCCCTGGCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGCCCTGCCCTGGCCCT	GGCCATGGCCGTGGCCCTGGCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGCCCTGCCCTGGCCCT	.	.	START=9545695;END=9545768;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9545991	STR_868599	CCCTGGCCCTGCCCCTGCCCTTGCCCTTGCC	CCCTGGCCCTGTCCCTGCCCTTGCCCTTGCC	.	.	START=9545991;END=9546021;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:134:0:0|0:70.38|63.62:38.91:0:8:0.0:0.0:-2147483648:-52|1;0|78;4|1:0|74	0|0:0|0:1.0:1.0:142:0:0|0:65.90|76.10:94.15:0:14:0.0:0.0:-2147483648:-45|1;-8|1;-6|1;-5|1;-2|1;0|83:0|76
-21	9546087	STR_868600	TGGCCCTGCCCTGGCTCTGGCCCTGCCCCAGCCCTGGCCCTGCCCCGGCCC	TGGCCCTGCCCTGCCTCTGGCCCTGCCCCAGCCCTGGCCCTGCCCCGGCCC,TGGCCCTGCCCTGGCTCTGGCCCTGCCCCAGCCCTGGCCCTGCCCTGGCCC,TGGCCCTGCCCTGGCTCTGGCTCTGCCCCAGCCCTGGCCCTGCCCCGGCCC	.	.	START=9546087;END=9546137;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:130:0:0|0:66.43|63.57:96.38:1:15:0.0:0.0:-2147483648:-33|1;-17|2;-13|1;-7|1;0|63:0|56	.
-21	9546720	STR_868601	CTGGCCCTGGCCCTGTCCCAGCCCTGCTCTGGCCCTGG	.	.	.	START=9546720;END=9546757;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:144:0:0|0:74.78|69.22:.:0:11:0.0:0.0:-2147483648:-12|1;-7|2;-1|1;0|82:0|79	0|0:0|0:1.0:1.0:127:0:0|0:59.62|67.38:.:0:16:0.0:0.0:-2147483648:-28|2;-7|1;0|70:0|61
-21	9547185	STR_868602	GCCCTGGCCCTGGCCCTGGCCCTGGCCCTG	GCCCTGGCCCTGGCCCTGGCCCTG,GCCCTGGCCCTGGCCGTGGCCCTG,GCCCTAGCCCTGGCCCTGGCCCTGGCCCTG	.	.	START=9547185;END=9547214;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-6|-6:1.0:0.5:137:0:0|0:86.97|50.03:69.73:23:12:-3.38:-0.27:112:-11|1;-6|75;-4|1;0|24:-6|71;0|21	1|2:-6|-6:1.0:0.5:102:0:0|0:59.24|42.76:125.73:1:10:-1.28:-0.08:87:-22|1;-6|69;0|2:-12|1;-6|66
-21	9548648	STR_868603	CCTGCCCTGCCCTTCCATGCCCTGGCCTTGCCCTCACCCTGCATTGGCCCTGCACTGGTCCTGCCCTGCCCTG	CCTGCCCTGCCCTTCCGTGCCCTGGCCTTGCCCTCACCCTGCATTGGCCCTGCACTGGTCCTGCCCTGCCCTG	.	.	START=9548648;END=9548720;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9549052	STR_868604	TGCCCTGCCCTGGCCTTGCCCTGCCCTG	TGCCCTGCCCTGGCCTTGCCCTACCCTG,TGGCCTGCCCTGGCCTTGCCCTGCACTG	.	.	START=9549052;END=9549079;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9549157	STR_868605	TGACCCTGACCCTGGCCCTGAC	.	.	.	START=9549157;END=9549178;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:133:0:0|0:66.50|66.50:.:0:12:0.0:0.0:-2147483648:-44|1;-2|1;0|104:0|95	0|0:0|0:1.0:1.0:119:0:0|0:59.50|59.50:.:0:15:0.0:0.0:-2147483648:-40|1;-34|1;-28|1;-7|1;0|80;2|1;5|1:0|72
-21	9549316	STR_868606	GCCCCGCCCTACCCTGGCCTTGCCCTGCCCTGGCCCTGCC	.	.	.	START=9549316;END=9549355;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9550373	STR_868607	TAAATAAATAAATAAATAAATA	TAAATAAATAAATAAATAAATAAATA	.	.	START=9550373;END=9550394;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:185:0:0|0:98.97|86.03:75.32:23:4:0.0:0.0:-2147483648:-17|1;-8|1;0|92;4|15;12|2:0|87;4|15;12|2	0|0:0|0:1.0:1.0:150:0:0|0:81.48|68.52:47.79:14:4:0.0:0.0:-2147483648:-17|1;-8|1;-4|2;0|78;4|8;12|1:-4|1;0|76;4|8;12|1
-21	9550678	STR_868608	TAAAAATATAAATAAAAATAAGTAAAAATAAATATAAGTAAATATAAATATAAATACATATAAATATAAAAAT	TAAAAATATAAATAAAAATAAGTAAAAATAAATATAAGTAAATATAAATATAAATACATATAAAAAT	.	.	START=9550678;END=9550750;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:301:0:0|0:139.24|161.76:112.71:32:7:0.0:0.0:-2147483648:-6|17;0|68:-6|17;0|70	1|0:-6|0:1.0:0.5:238:0:0|0:99.60|138.40:81.78:0:3:-2.48:-1.07:160:-6|27;0|48:-6|28;0|48
-21	9550862	STR_868609	TGAGATGAGATGAAATGACAAAATGATGAGATGAGATGAGATGATGAGATGA	TGAGATGAGATGAAATGATGAGATGAAATGACAAAATGAGATGAGATGATGAGATGA,TGAGATGAGATGAAATGATGAGATGAAATGACAAAATGATGAGATGAGATGATGAGATGA,TGAGATGAGATGAAATGATGAGATGAAATGACAAAATGATGAGATGAGATGAGAAGATGAGATGA,TGAGATGAGATGAAATGATGAGATGAAATGACAAAATGATGAGATGAGATGAGATGATGAGATGA	.	.	START=9550862;END=9550913;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|13:1.0:0.5:162:0:0|0:111.88|50.12:15.01:29:7:-7.26:0.0:135:-39|1;-23|1;-15|1;-12|1;-10|1;-5|6;0|39;8|16;10|1;13|4:-5|5;0|35;8|16;13|5	0|3:0|13:1.0:0.5:149:0:0|0:97.77|51.23:69.31:13:6:-4.71:-0.16:119:-44|3;-31|1;-21|1;-20|1;-15|2;-5|2;-4|1;0|33;8|3;10|1;13|5:-5|2;0|33;8|5;13|5
-21	9561711	STR_868611	AAAAAAAAAAA	AAAAAAAAA,AAAAAAAAAA,AAAAAAACAA,AAAAAAGAAAA,AAAAAAAAAAAA	.	.	START=9561711;END=9561721;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9562967	STR_868612	TTTTTTTTTTTTTTTT	TTTTTTTTTTTATTTT,TTTTTTTTTTTTATTTT,TTTTTTTTTTTTTATTTT,TTTGTTTTTTTTTTTATGTT	.	.	START=9562967;END=9562982;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	3|4:2|4:1.0:0.5:189:0:0|0:155.58|33.42:51.44:88:5:-18.51:-0.36:184:-4|1;0|47;1|16;2|42;3|10;4|18;6|4;11|3:0|42;1|15;2|35;3|9;4|16;6|3
-21	9565451	STR_868613	TATGTATGTATGTATGT	TATGTATGTATGTATGTATGTATGTATGT,TATGTATGTATGTATGTATGTATGTATGTATGT,TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT,TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT,TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	START=9565451;END=9565467;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9568426	STR_868614	TTTTTTTTTTTTT	TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT	.	.	START=9568426;END=9568438;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|3:1.0:0.5:161:0:0|0:88.38|72.62:24.32:18:11:-0.57:-0.06:159:-9|4;-4|1;0|80;2|9;3|31;4|2;5|1:0|70;2|7;3|32;4|2;5|1	0|2:0|2:1.0:0.5:129:0:0|0:51.51|77.49:15.21:28:9:-1.59:-0.33:126:-9|2;-8|1;-2|1;0|47;1|5;2|34;3|20;4|1:0|40;1|5;2|33;3|22
-21	9569973	STR_868616	ACACTCACACACACAC	ACACACACACACACAC,ACACACACACACACGC,ACATTCACACACACAC	.	.	START=9569973;END=9569988;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:226:0:0|0:93.52|132.48:37.17:1:3:-3.68:0.0:199:0|186:0|178	0|0:0|0:1.0:0.5:189:0:0|0:70.72|118.28:5.5:3:9:-5.26:-1.41:155:-2|1;0|152;2|2:0|139;2|2
-21	9571586	STR_868617	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TTTTTTTTTTTTTTTTTTTTTT,CCTTTTTTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTGTTTTTTTTTTTTGTTTTTTTTTTTTTTTT	.	.	START=9571586;END=9571615;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9573172	STR_868618	TGTGCGTGTGTGTGTGGGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG	TGTGTGTGTGTGTGTGGGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG,TGTGTGTGTGTGTGTGGGTGTGTGCGTGTGTGTTTGTGTATGTATGTGTGTGTG,TGTGTGTGTGTGTGTGGGTGTGTGCGTGTGTGTGTGTGTGTGTGTATGTGTGTGTG,TGTGTGTGTGTGGGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG,TGTGTGTGTGTGTGTGGGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTG,TGTGTGTGTGTGTGTGCGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTATGTGTG	.	.	START=9573172;END=9573233;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|6:-8|0:1.0:0.5:233:0:0|0:119.15|113.85:5.34:70:11:-0.17:0.0:199:-26|2;-24|3;-22|3;-16|1;-10|3;-8|13;-6|24;0|47:-10|2;-8|11;-6|24;0|42	3|6:-6|0:0.52:0.26:216:0:0|0:119.30|96.70:0.04:50:21:-0.81:-0.11:197:-36|1;-34|3;-28|1;-26|5;-18|1;-10|1;-8|18;-6|22;0|45;6|3:-10|1;-8|16;-6|21;0|30
-21	9574847	STR_868619	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAA	AAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAA	.	.	START=9574847;END=9574876;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9575559	STR_868620	AAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA	.	.	START=9575559;END=9575573;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|2:0|1:1.0:0.5:78:0:0|0:46.47|31.53:17.79:3:6:-1.36:-1.02:56:-1|1;0|33;1|19;5|3:0|26;1|18
-21	9575950	STR_868621	TTTTCTATTTTCTATTTTTATTTTATTTTTATTTTT	.	.	.	START=9575950;END=9575985;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:118:0:0|0:81.87|36.13:57.35:0:0:-6.32:-0.73:84:0|48:0|48	0|0:0|0:1.0:1.0:110:0:0|0:55.00|55.00:21.65:0:1:0.0:0.0:-2147483648:0|42:0|41
-21	9579023	STR_868622	AAAAAAAAAAAAAAAAAGAAAA	AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAAAAAAAGAAAA	.	.	START=9579023;END=9579044;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|-6:1.0:0.5:109:0:0|0:62.66|46.34:2.36:42:15:-1.0:-0.08:84:-6|20;-5|9;-4|4;-2|10;0|15;1|14;2|2;3|3:-6|14;-5|9;-2|10;0|10;1|13;2|1	2|5:-6|-2:1.0:0.5:78:0:0|0:31.97|46.03:7.05:16:8:-0.94:-0.09:68:-6|19;-2|15;-1|11;0|4;1|1;3|1:-8|1;-6|16;-2|15;-1|10;0|1
-21	9579349	STR_868623	TTTTTTCTTTTTTTTTTTTTTTTTT	TTTTTTCTTTTTTTTTTTTTT,TTTTTTCTTTTTTTTTTTTTTTT,TTTTTTCTTTTTTCTTTTTTTTTT,TTTTTTCTTTTTTTTTTTTTTTTT,TTTTTTCTTTTCTTTTTTTTTTTTT	.	.	START=9579349;END=9579373;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	4|3:-1|-1:1.0:0.5:93:0:0|0:51.10|41.90:40.77:1:6:-0.58:0.0:79:-1|59;0|1;4|2:-1|49	4|3:-1|-1:1.0:0.5:88:0:0|0:47.71|40.29:31.53:0:7:-0.38:-0.61:74:-8|1;-6|1;-1|46;0|1;3|1;4|1:-1|42
-21	9579443	STR_868624	TTTTTTTTTTTTTTTTTT	TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT	.	.	START=9579443;END=9579460;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9579597	STR_868625	TTTTTTTTTTTTTTTTT	TTTTTTATTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT	.	.	START=9579597;END=9579613;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	1|5:-4|3:1.0:0.5:88:0:0|0:43.04|44.96:22.75:1:6:-0.13:-1.18:80:-45|1;-13|1;-7|3;-6|1;-4|33;3|27;5|2:-4|31;3|23;4|1
-21	9580555	STR_868626	TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATATA,TATATATATATATATATATATATATA,TATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATA,TATATATATGTGTGTGTATATATATATATATA,TATATATATGTGTGTGTATATATATATATATATA,TATATATATGTGTGTGTATATATATATATATATATATATATA,TATATATATGTGTGTATATATATATATATATATATATATATATA,TATATATATGTGTGTATATATATATATATATATATATATATATATA,TATATATATGTGTGTGTATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATA,TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATA	.	.	START=9580555;END=9580616;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	5|11:-32|-18:1.0:0.5:54:0:0|0:30.23|23.77:6.76:5:8:-0.64:-1.61:34:-32|16;-18|6;-16|1;0|5:-32|16;-26|1;-18|4
-21	9584115	STR_868627	AAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,GAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,GAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AACTAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA	.	.	START=9584115;END=9584131;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9584267	STR_868628	ATTTATTTATTTATT	.	.	.	START=9584267;END=9584281;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:202:0:0|0:153.46|48.54:96.39:0:5:-14.32:0.0:190:0|151:0|144	0|0:0|0:1.0:0.5:190:0:0|0:140.53|49.47:137.03:0:4:-11.1:-0.67:181:0|148:0|143
-21	9588130	STR_868629	AAAAAAAAAAA	AAAAAAGAAAA,AAAAAAAAAAAA	.	.	START=9588130;END=9588140;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9588535	STR_868630	AAAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA	.	.	START=9588535;END=9588552;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|0:-1|0:1.0:0.5:148:0:0|0:95.30|52.70:10.4:47:11:-3.88:-1.25:123:-11|1;-3|4;-2|8;-1|40;0|26;1|22;2|5;6|1;7|2;13|1:-3|6;-2|6;-1|41;0|14;1|19;2|4	.
-21	9588886	STR_868631	TTTTTTTTTTTTTT	TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT	.	.	START=9588886;END=9588899;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	4|2:-3|-5:1.0:0.5:157:0:0|0:108.83|48.17:23.93:55:6:-5.97:-1.09:155:-6|23;-5|35;-4|14;-3|35;-1|15;0|2:-6|23;-5|33;-4|13;-3|31;-1|15	3|2:-4|-5:1.0:0.5:117:0:0|0:78.84|38.16:7.95:62:5:-3.72:-0.76:117:-6|19;-5|48;-4|7;-3|3;-2|13;-1|2;0|2:-6|20;-5|45;-4|7;-3|3;-2|13;-1|2
-21	9591586	STR_868632	TATATACATATATATATAT	TATATACATATATATAT,TATATACATATGTATAT,TATATACATATATATATATATAT	.	.	START=9591586;END=9591604;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-2|-2:1.0:0.5:164:0:0|0:110.29|53.71:78.32:61:2:-5.83:-1.03:139:-2|61;0|55:-2|59;0|54	1|2:-2|-2:1.0:0.5:156:0:0|0:92.28|63.72:92.28:49:0:-1.7:-0.5:145:-2|76;0|42:-2|72;0|41
-21	9591982	STR_868633	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG,TATGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG	.	.	START=9591982;END=9592001;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9646960	STR_868635	GATGGATGGATGGATGGATG	GATTGATGGATGGATG	.	.	START=9646960;END=9646979;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-4:1.0:0.5:133:0:0|0:106.88|26.12:19.35:22:1:-16.6:-1.02:118:-8|1;-4|28;0|55:-4|32;0|55	0|0:0|0:0.97:0.97:151:0:0|0:75.50|75.50:1.46:26:4:0.0:0.0:-2147483648:-18|1;-4|26;0|74:-4|24;0|72
-21	9647550	STR_868636	AAAAAAAAAAAAAAA	AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAATAAAAAA	.	.	START=9647550;END=9647564;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9655804	STR_868637	AAAAAAAAAAA	AAAAAAAAAA,AAAAAAAAAAAA	.	.	START=9655804;END=9655814;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:205:0:0|0:102.50|102.50:3.31:62:30:0.0:0.0:-2147483648:-11|1;-7|1;-1|17;0|101;1|34;2|11;4|1;24|2:-1|17;0|78;1|26;2|9	0|2:0|1:0.97:0.49:172:0:0|0:101.49|70.51:1.56:16:17:-1.78:-0.98:128:-1|2;0|89;1|33;2|7;3|4;24|1:-1|2;0|70;1|32;2|6;3|5
-21	9656261	STR_868638	ATTATTTTATTTTATCATTACTATTATTATTATTAT	.	.	.	START=9656261;END=9656296;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:185:0:0|0:92.50|92.50:.:8:15:0.0:0.0:-2147483648:-2|1;0|99;2|1;3|2;6|2;7|2;15|1;26|1:0|92
-21	9666046	STR_868639	TTTTTTTTTTCTTTT	TTTTTTTTCTTTT,TTTTTTTTTCCTTT,TTTTTTTTTCTTTT	.	.	START=9666046;END=9666060;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|-1:1.0:0.5:121:0:0|0:46.68|74.32:18.96:31:0:-5.37:-0.62:95:-2|21;-1|45;0|18:-2|21;-1|42;0|16	0|3:0|-1:1.0:0.5:131:0:0|0:53.90|77.10:18.45:35:2:-3.22:-0.08:106:-2|26;-1|49;0|21:-2|24;-1|47;0|19
-21	9668157	STR_868640	TTTTCATTTTTTTTCCTTTTCTTTTCTTTCTTTT	TTTTCATTGTTTTTCCTTTTCTTTTCTTTCTTTT	.	.	START=9668157;END=9668190;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:213:0:0|0:127.76|85.24:178.72:0:14:0.0:0.0:-2147483648:-8|8;0|113;1|3:0|113
-21	9669543	STR_868641	TGTGTGTGTGTGT	.	.	.	START=9669543;END=9669555;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:0.5:172:0:0|0:152.66|19.34:22.5:0:17:-26.63:-2.72:169:0|159;11|1:0|157
-21	9670999	STR_868642	ATATATATATATATATATATTTCTCTCTCTCTCTCTATATATATATATATAT	ATATATATATATATTTTCTCTCTCTCTCTCTCTATATATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTATATATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTCTATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTATATATATAT,ATATATATATATATATATTTTTCTCTCTCTCTCTCTCTATATATATATAT,ATATATATATATATATATTTTTCTCTCTCTCTCTCTCTCTATATATATAT,ATATATATATATATATATTTTTCTCTCTCTCTCTCTCTCTCTATATATAT,ATATATATATATATTTTTTTTTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTATATATATATATATATAT,ATATATATATATATATATATATTTCTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTATATATATATATATATAT,ATATATATATATATATATTTCTCTCTCTCTCTCTCTCTATATATATATATATAT,ATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTCTATATATATATAT,ATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTCTCTATATATATATATAT,ATATATATATATATATATATATATTTCTCTCTCTCTCTCTCTCTATATATATATATATAT	.	.	START=9670999;END=9671050;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9672270	STR_868643	TTTTGTTTTTTTTTT	TTTTGTTTTTTTTT,TTTTGTTTTTGTTTTT,TTTTGTTTTTTTTTTT	.	.	START=9672270;END=9672284;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-1:1.0:0.5:132:0:0|0:82.30|49.70:29.27:1:1:-2.33:-0.07:129:-1|40;0|65;3|1:-1|40;0|60;3|1	0|1:0|-1:1.0:0.5:152:0:0|0:102.60|49.40:23.09:3:2:-5.1:-0.32:144:-1|37;0|85:-1|35;0|77
-21	9673580	STR_868644	TTTTTTTTTTTTTT	TTTTTTTTTTTT,TACTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTT	.	.	START=9673580;END=9673593;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9673899	STR_868645	TTTCTTTTGTTTTCTCTTTCTTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTTCTTTCTTTTTTTT	TTTCTTTTGTTTTCTCTTTCTTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTTATTTCTTTTTTTTT,TTTCTTTTGTTTTCTCTTTCTTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTTCTTTCTTTTTTTTT,TTTCTTTTGTTTTCTCTTTCTTTTCTTTTCTTTTCTTTCTCTCTCTTTCTTTCCTTTCTTTCTTTTTTTT	.	.	START=9673899;END=9673963;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|1:1.0:0.5:212:0:0|0:112.06|99.94:96.08:14:29:-0.59:0.0:130:-7|1;-5|1;0|27;1|31;5|16;25|1:0|27;1|30;5|3	0|2:0|1:1.0:0.5:245:0:0|0:106.86|138.14:149.06:27:17:-1.73:-0.41:163:-17|2;-4|17;0|29;1|32;5|2;6|2:-4|15;0|27;1|30;6|1
-21	9675247	STR_868646	TTTTTTTTTTT	TTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT	.	.	START=9675247;END=9675257;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|2:0|-1:0.99:0.49:191:0:0|0:118.10|72.90:2.07:20:25:-0.0:-1.45:153:-12|1;-4|1;-3|1;-2|10;-1|66;0|83;1|1:-3|4;-2|10;-1|66;0|56
-21	9676026	STR_868647	AAAAAAAAAGAAAAAAGAAAAAA	.	.	.	START=9676026;END=9676048;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:190:0:0|0:140.94|49.06:11.67:26:11:-18.32:0.0:118:-14|1;-5|1;0|84;1|13;2|11;3|1;4|1:0|80;1|10;2|9;3|1	0|0:0|0:1.0:0.5:173:0:0|0:133.80|39.20:3.36:11:3:-20.9:0.0:113:0|86;1|11;2|2;3|1:0|84;1|8;2|1
-21	9676788	STR_868648	AAAATAAAATAAAATAAA	AAATAAAATAAAATAAA	.	.	START=9676788;END=9676805;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-1:1.0:0.5:120:0:0|0:76.00|44.00:129.08:1:10:-2.83:-0.08:103:-5|1;-3|1;-1|25;0|51;1|2;5|2;21|1:-5|1;-1|25;0|51	0|1:0|-1:1.0:0.5:151:0:0|0:99.49|51.51:89.46:1:7:-4.93:-1.25:118:-1|28;0|67;1|1:-1|27;0|65
-21	9676854	STR_868649	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGT	.	.	START=9676854;END=9676895;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|13:-2|18:1.0:0.5:114:0:0|0:65.17|48.83:35.44:60:13:-1.03:-0.3:80:-18|1;-15|1;-10|1;-8|16;-7|3;-3|1;-2|1;0|13;2|7;4|4;5|1;10|1;12|5;14|5;16|8:-8|14;0|10;2|7;4|3;12|4;14|4;16|8	.
-21	9677576	STR_868650	AAAAAAAAAAAAA	AAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA	.	.	START=9677576;END=9677588;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-21	9682651	STR_868651	TTTTTTTCTTTTTTT	TATTTTTCTTTTTTT	.	.	START=9682651;END=9682665;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:134:0:0|0:62.61|71.39:155.06:4:7:0.0:0.0:-2147483648:-10|1;0|90;1|4:0|83;1|3	0|0:0|0:1.0:1.0:160:0:0|0:92.48|67.52:183.23:4:5:0.0:0.0:-2147483648:-14|1;-1|1;0|114;1|2:0|105;1|2
-21	9695816	STR_868652	AGACAGACAGACAGACAGA	AGACAGACAGACAGACAGACAGA,GGACAGACAGACAGACAGACAGA,AGACAGAGAGACAGACAGACAGACAGA,GGACAGACAGACAGACAGACAGACAGA	.	.	START=9695816;END=9695834;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|0:4|0:1.0:0.5:1129:0:0|0:549.06|579.94:312.73:215:23:-0.4:-6.23:874:-28|1;-15|3;-7|1;-5|6;0|400;4|129;5|1;8|177;12|2;16|1;20|2:0|374;4|130;8|172;12|2;16|3	1|0:4|0:1.0:0.5:1152:0:0|0:469.57|682.43:168.99:180:25:-11.91:-8.46:883:-22|1;-10|1;-7|1;-5|3;-4|1;-1|1;0|491;4|70;8|133;12|9;16|1;20|4:0|454;4|69;8|130;12|10;16|4
-22	16848278	STR_887762	ATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAAACATCGAATGGAATCGAAT	ATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAAT,ATCAAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAAACATCGAATGGACTCGAAT,ATCGAATGGAATCAAATGGAATCATCATCGAATGGAATCGAATGGAAACAACGAATGGACTCGAAT,ATCGAATGGAATCAAATGGAATCATCATCGAATGGAATCGAATGGAAACATCGAATGGAATCGAAT,ATCGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAAACATCGAATGGACTCGAAT	.	.	START=16848278;END=16848343;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16848493	STR_887763	ATCGAATGGAATCGAATGGAATCATCAACGAATGGAATCGAATGGAATC	ATCGAATGGAATCGAATGGAATC,ATCGAATGGAATTGAATGGAATC,GTCGAATGGAATCGAATGGAATC	.	.	START=16848493;END=16848541;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16849180	STR_887764	GAATGGAATGGAATGGAAT	.	.	.	START=16849180;END=16849198;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16849229	STR_887765	GAATGGAATGGAATGGAAT	GAATGGAATGGAAT	.	.	START=16849229;END=16849247;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16849376	STR_887766	GAATGGAATGGAATGGA	.	.	.	START=16849376;END=16849392;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16849476	STR_887767	GAATCGAATGGAATCATCATCGAATGGAATCGAATTGAATCATCGAATGGAATCGAAT	GAATCGAATGGAATCATCATCGAATGGAATCGAATTGAATCATTGAATGGAATCGAAT	.	.	START=16849476;END=16849533;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:54:0:0|0:28.22|25.78:57.54:0:6:-0.06:-0.14:34:0|18;3|1:0|17	0|0:0|0:1.0:1.0:70:0:0|0:35.00|35.00:13.56:0:10:0.0:0.0:-2147483648:-11|1;0|25:0|19
-22	16851734	STR_887768	ATGGAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGAAT	ATGGAATGGAATCGAATGGAATCATCAAATGGAATTGAATGGAAT,GTGGAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGAAT	.	.	START=16851734;END=16851778;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16852263	STR_887769	GAATGGAATGGAATGGAAT	AAATGGAATGGAATGGAAT	.	.	START=16852263;END=16852281;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16852588	STR_887770	GAATGGAATCGAATGGAATCATTGAATGGAATTGAATGGAAT	.	.	.	START=16852588;END=16852629;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:59:0:0|0:29.50|29.50:.:1:8:0.0:0.0:-2147483648:-56|1;-46|1;-1|1;0|27;3|1:-10|1;0|25
-22	16854540	STR_887771	TCGAATGGAATCGAATAGAATCATCGAATGAAATCGAATGGAATC	TCGAATGGAATCAAATAGAATCATCGAATGAAATCGAATGGAATC,TCGAATGGAATCGAATAGAATCATCAAATGAAATCGAATGGAATC	.	.	START=16854540;END=16854584;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|0:1.0:0.5:59:0:0|0:30.50|28.50:57.37:0:8:-0.05:-0.26:46:0|16;3|1:0|13	.
-22	16856407	STR_887772	GAATGGAATCGAATGGAATCATGGAATGGAATAGAATGGAAT	GAATGGAATCAAATGGAATCATGGAATGGAATAGAATGGAAT,GAATGGAATCGAATGGAATCATGGAATGGAATAAAATGGAAT,GAATGGAATCGAATGGAATCATGGAATGGAATTGAATGGAAT	.	.	START=16856407;END=16856448;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16858622	STR_887774	GAATGGAATCGAATGGAATCATAGAATGGAATTGAATGGAAT	GAATGGAATCGAATGGAATCATAGAATGGAATTTAATGGAAT	.	.	START=16858622;END=16858663;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16859128	STR_887775	GAATGGAATCGAATGGAATCATGGAGTGGAATCGAATGGAAT	.	.	.	START=16859128;END=16859169;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:45:0:0|0:23.00|22.00:.:0:6:0.0:0.0:-2147483648:-46|2;-25|1;0|20:0|20	0|0:0|0:1.0:1.0:47:0:0|0:23.50|23.50:.:0:4:0.0:0.0:-2147483648:-10|1;0|24:0|23
-22	16859490	STR_887776	GAATGGAATAGAATGGAATAATCGAATAGAATTGAATGGAAT	.	.	.	START=16859490;END=16859531;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:46:0:0|0:23.00|23.00:.:0:5:0.0:0.0:-2147483648:-6|1;0|26:0|22	0|0:0|0:1.0:1.0:43:0:0|0:21.50|21.50:.:0:4:0.0:0.0:-2147483648:-26|1;0|22:0|21
-22	16859558	STR_887777	AATCGAATGGAATCGACTGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT	AATCGAATGGAATCAACTGGAATCATAATCGAATGGAATCGAATGGAATTATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT,AATCGAATGGAATCAACTGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT,AATCGAATGGAATCAATTGGAATCATCATCGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT,AATCGAATGGAATCGACTGGAATCATCATCGAATGGAATTGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT,AATCGAATGGAATCGACTGGAATCATCATTGAATGGAATCGAATGGAATCATCGAATGGAATCGAATGGAATCATCAAATGGAATCGAAT	.	.	START=16859558;END=16859647;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:60:0:0|0:30.00|30.00:8.83:0:8:0.0:0.0:-2147483648:0|14:0|11
-22	16859807	STR_887778	GAATGGTATCGAATGGAATAAATCGAATGGAATTGAATGGAATCATCATGGAATGGAATCAAATGGAATCATGGAATGGAAT	GAATGGAATCGAATGGAAAAAATCGAATTGAATCAAATGGAACCATCATCTAATGGAATTAAATAGAATCATTGAATGGAAT,GAATGGTATCGAATGGAATAAATCAAATGGAATTGAATGGAATCATCATGGAATGGAATCAAATGGAATCATGGAATGGAAT,GAATGGTATCGAATGGAATAAATCGAATGGAATTGAATGGAATCATCATGGAATGGAATCAAATGGAATCATGGAATGGACT,GAATGGTATCGAATGGAATAAATTGAATGGAATTGAATGGAATCATCATGGAATGGAATCAAATGGAATCATGGAATGGAAT	.	.	START=16859807;END=16859888;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:57:0:0|0:45.64|11.36:62.17:0:3:-6.2:-1.95:48:-22|1;0|9:0|8	0|0:0|0:1.0:1.0:63:0:0|0:31.50|31.50:3.08:0:5:0.0:0.0:-2147483648:0|20:0|17
-22	16860043	STR_887779	GAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGAAT	GAATGGAATCGAATGGAATCATCAAATGGAATTGAATGGAAT	.	.	START=16860043;END=16860084;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:51:0:0|0:21.50|29.50:44.72:0:7:-0.59:-0.13:38:0|21:0|16	0|0:0|0:1.0:1.0:54:0:0|0:27.00|27.00:12.51:0:6:0.0:0.0:-2147483648:-26|1;-13|1;0|31;28|1:0|29
-22	16860190	STR_887780	GAATGGAATCGAATGGAATGATTGAATGGAATCGAATGAAATCATCGAATGGAATTGAATGGAAT	TGGAATTGAATGGAAT,GAATGGAATCGAATGGAATGATTGAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGAAT,GAATGGAATCGAATGGAATGATTGAATGGAATCGAATGGAATCATCGAATGGAATTGAATGGACT	.	.	START=16860190;END=16860254;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|2:0|0:1.0:0.5:49:0:0|0:22.96|26.04:48.21:0:6:-0.14:0.0:33:-46|1;-39|1;0|17:0|17
-22	16860595	STR_887781	GAATGGAATCGAATGGAATAATGGAATGGAAT	GAATGGAATCGAATGGAATAATAGAATGGAAT	.	.	START=16860595;END=16860626;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16861636	STR_887783	ATCGAATGGAATCGAATGGAATCATCGAATGGACTCGAATGGAATC	ATCGAATGGAATTGAATGGAATCATCGAATGGACTCGAATGGAATC	.	.	START=16861636;END=16861681;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16861791	STR_887784	GAATCGAATGGAATCATCGAATGGACTCGAATGGAATCAACATCGAATGGAATCAAATGGAATC	GAATAGAATGGAATCATCGAATGGACTCGAATGGAATCAACATCGAATGGAATCAAATGGAATC	.	.	START=16861791;END=16861854;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16862008	STR_887785	GAATGGAATTGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAATGGAATC	GAATGGAATTGAATGGAATCGAATGGAATAATCATCGAATGGAATCGAATGGAATC,GAATGGAATTGAATGGAATCGAATGGAATCATCATCGAATGGAATCGAAGGGAATC	.	.	START=16862008;END=16862063;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|0:1.0:0.5:67:0:0|0:34.29|32.71:73.46:0:10:-0.05:0.0:56:-65|2;-29|2;-19|1;0|30:0|25	.
-22	16862083	STR_887786	GAATGGAATGGAATGGAAT	.	.	.	START=16862083;END=16862101;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:54:0:0|0:26.21|27.79:.:0:3:0.0:0.0:-2147483648:0|39:0|37	0|0:0|0:1.0:1.0:41:0:0|0:20.50|20.50:.:0:2:0.0:0.0:-2147483648:-16|1;0|26:0|25
-22	16862132	STR_887787	ATGGAATGGAGTGGAATGGAA	.	.	.	START=16862132;END=16862152;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:51:0:0|0:25.50|25.50:.:0:1:0.0:0.0:-2147483648:0|26:0|25	0|0:0|0:1.0:1.0:42:0:0|0:21.00|21.00:.:0:2:0.0:0.0:-2147483648:-6|1;0|37:0|34
-22	16862288	STR_887788	ATTGAATGGAATTGAATTGAAT	ACTGAATGGAATTGAATTGAAT	.	.	START=16862288;END=16862309;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:46:0:0|0:19.04|26.96:55.41:0:4:0.0:0.0:-2147483648:-55|1;-42|1;-29|1;0|26:0|26	0|0:0|0:1.0:1.0:52:0:0|0:26.00|26.00:12.0:0:3:0.0:0.0:-2147483648:-18|1;-4|1;-3|1;0|38:0|36
-22	16862340	STR_887789	ATCGAATGGAATCGAATAGAATCATCGAATGGACTCGAATGGAATC	GAATGGAATCGAATAGAATCATCGAATGGACTCGAATGGAATC,ATCGAATGGAATCGAATAGAATCATCGAATGGACTCAAATGGAATC	.	.	START=16862340;END=16862385;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16873716	STR_887790	TTTTTTTTTTTTTTTTT	TTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT	.	.	START=16873716;END=16873732;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-5:1.0:0.5:64:0:0|0:42.98|21.02:20.14:1:4:-2.68:-1.31:48:-5|14;-1|1;0|34:-5|12;-1|1;0|27	0|1:0|-5:1.0:0.5:58:0:0|0:33.68|24.32:15.38:1:2:-0.78:-0.12:42:-5|16;-3|1;0|23:-5|15;-3|1;0|18
-22	16873970	STR_887791	AGATAGATGATTGATGGATAAATTGATACATAGATATATAGATATATAGA	.	.	.	START=16873970;END=16874019;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16874431	STR_887792	TGATTGATAGATGATTGATCGATTGATTGGTTGACTGATTGAT	.	.	.	START=16874431;END=16874473;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:109:0:0|0:44.02|64.98:.:0:0:0.0:0.0:-2147483648:0|64:0|61	0|0:0|0:1.0:1.0:112:0:0|0:43.01|68.99:.:0:0:0.0:0.0:-2147483648:0|68:0|65
-22	16875531	STR_887793	AAAAAAAGAAAAAAAAAAAAAAA	AAAAAAAGAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAGAAAAAAAAAAAAAAAA,AAAAAAAGAAAAAAAAAAAAAAAAA	.	.	START=16875531;END=16875553;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:76:0:0|0:38.00|38.00:6.32:1:10:0.0:0.0:-2147483648:-12|1;-10|3;0|35;1|1:0|29	0|0:0|0:1.0:1.0:61:0:0|0:30.50|30.50:3.76:0:9:0.0:0.0:-2147483648:-12|1;-10|4;0|39;2|1;3|1:0|33
-22	16876010	STR_887794	AAAAAATAAAAATAAAAAAAA	AAAAAATAAAAATAAAAAAAAA,AAAAAATAAAAATAAAAACAAA	.	.	START=16876010;END=16876030;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|1:1.0:0.5:64:0:0|0:40.53|23.47:21.75:0:4:-1.86:-0.14:43:-24|1;-11|1;0|22;1|11;6|1:0|20;1|11	0|1:0|1:1.0:0.5:62:0:0|0:41.57|20.43:16.14:0:4:-2.9:-1.8:44:0|27;1|12:0|20;1|11
-22	16880390	STR_887795	AAAAAGCAAAAACAGAAAACAAAAACAA	AAAAAGCAAAAACAGAAAAAAAACAA,AAAAAGCAAAAACAGAAAAAAAAACAA	.	.	START=16880390;END=16880417;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|-1:1.0:0.5:71:0:0|0:56.50|14.50:6.96:0:4:-9.35:-1.34:50:-2|3;-1|4;0|39:-1|4;0|39	0|1:0|-2:1.0:0.5:72:0:0|0:61.50|10.50:17.66:0:3:-10.79:0.0:63:-2|5;-1|1;0|38;7|1:-2|5;0|38
-22	16881478	STR_887796	ACAACAACAACAACAA	ACAACAACAACAAAAA,ACAACAACAACAACAACAA	.	.	START=16881478;END=16881493;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|0:3|0:1.0:0.5:73:0:0|0:20.97|52.03:59.46:0:1:-3.78:-1.02:70:0|46;3|17:0|45;3|16	0|2:0|3:1.0:0.5:84:0:0|0:50.05|33.95:143.83:0:3:-1.14:0.0:70:0|33;3|26:0|32;3|23
-22	16882992	STR_887797	AAAAAAAAAAAAAA	AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA	.	.	START=16882992;END=16883005;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|-1:1.0:0.5:102:0:0|0:64.10|37.90:6.15:26:2:-2.38:-0.3:90:-27|1;-2|4;-1|44;0|27;1|1;2|1:-2|4;-1|43;0|24;1|1;2|1	0|2:0|-2:0.6:0.3:98:0:0|0:55.00|43.00:0.17:22:6:-1.09:-2.1:74:-3|4;-2|8;-1|13;0|33;1|2;2|2:-3|4;-2|8;-1|13;0|30;1|2;2|1
-22	16884002	STR_887799	CCCTAACCGTAAACTTAACCCCTAACCCCTAACCCTAACACCAACCTTAACCCTA	CCCTAACCCTAAACTTAACCCCTAACCCCTAACCCTAACACCAACCTTAACCCTA	.	.	START=16884002;END=16884056;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:126:0:0|0:77.05|48.95:92.39:0:8:-2.26:-0.26:110:-7|1;-1|1;0|49:0|48	0|1:0|0:1.0:0.5:128:0:0|0:70.25|57.75:114.39:0:10:-0.66:-1.66:112:0|54:0|51
-22	16886765	STR_887800	TGTGTCTGTTTGTGTGTGTGT	TGTGTCTGTTTGTGTGTGTGTGT	.	.	START=16886765;END=16886785;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|2:1.0:0.5:58:0:0|0:50.49|7.51:8.07:0:0:-9.62:-0.96:51:0|41;2|4:0|37;2|4	0|1:0|2:1.0:0.5:51:0:0|0:44.50|6.50:11.19:0:0:-7.86:-1.3:48:0|35;2|5:0|33;2|5
-22	16889548	STR_887801	AAAAAAAAAAAA	AAAAAAAAAAA,AAAAAAAAAAAAA	.	.	START=16889548;END=16889559;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|0:1|0:1.0:0.5:63:0:0|0:43.00|20.00:2.33:25:0:-2.29:-0.38:63:-1|3;0|25;1|16:-1|3;0|21;1|16	0|0:0|0:1.0:1.0:47:0:0|0:23.50|23.50:6.77:4:1:0.0:0.0:-2147483648:-1|5;0|29:-1|4;0|28
-22	16891978	STR_887802	AAAAAAAAAAAGAAAAGAAAAGAAAAAA	AAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAAAAAGAAAAGAAAAAA,AAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAA	.	.	START=16891978;END=16892005;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16892581	STR_887803	AAAAAAAAAAACAAACAAAAAAA	AAAACAAAAAAACAAACAAAAAAA	.	.	START=16892581;END=16892603;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	1|0:1|0:1.0:0.5:63:0:0|0:15.45|47.55:52.84:1:9:-4.24:0.0:62:0|34;1|3:0|29;1|1
-22	16893474	STR_887804	AAACAAAACAAAACAAAA	.	.	.	START=16893474;END=16893491;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:54:0:0|0:27.00|27.00:.:0:0:0.0:0.0:-2147483648:0|31:0|31	0|0:0|0:1.0:1.0:53:0:0|0:28.50|24.50:.:3:1:0.0:0.0:-2147483648:-8|1;0|25;5|1:0|24
-22	16899609	STR_887805	AAAAAATAAAAAAAA	AAAAAATAAAAAA,AAAAAATAAAAAAAAA	.	.	START=16899609;END=16899623;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:51:0:0|0:25.50|25.50:5.5:3:3:0.0:0.0:-2147483648:-2|2;0|35:-2|2;-1|1;0|32	0|1:0|-2:1.0:0.5:56:0:0|0:45.02|10.98:6.12:0:6:-6.2:-0.35:48:-2|5;0|33:-2|5;0|32
-22	16904171	STR_887806	AAAAAAAAAAAAA	AAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA	.	.	START=16904171;END=16904183;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-4:1.0:0.5:52:0:0|0:41.61|10.39:9.22:0:2:-5.74:-1.08:46:-4|6;0|37:-4|5;0|31	0|1:0|-4:1.0:0.5:52:0:0|0:43.49|8.51:4.13:2:4:-8.03:-1.49:45:-4|3;-2|1;-1|1;0|37:-4|4;-2|1;-1|1;0|35
-22	16909237	STR_887807	TTTTTTTTTTCTTTTT	TTTTATTTTTCTTTTT,TTTTTTTTTTTCTTTTT	.	.	START=16909237;END=16909252;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|1:1.0:0.5:123:0:0|0:80.00|43.00:64.17:0:0:-3.24:-4.88:111:-13|2;-2|2;0|91:0|59;1|26	1|2:0|1:1.0:0.5:143:0:0|0:78.11|64.89:24.79:3:0:-0.52:-2.8:135:-13|2;-1|1;0|116:-1|1;0|59;1|44
-22	16911088	STR_887808	AAAAACAAAAACAAAAAC	AAAACAAAAACAAAAAC,AAAAACAAAAACAGAAAC	.	.	START=16911088;END=16911105;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-1:1.0:0.5:63:0:0|0:46.59|16.41:8.78:0:7:-3.51:-4.4:58:-1|7;0|33:-1|12;0|27	.
-22	16913537	STR_887809	AAAAAAAAAAAA	AAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA	.	.	START=16913537;END=16913548;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|1:1|-2:1.0:0.5:95:0:0|0:59.28|35.72:34.78:28:2:-1.63:-3.47:95:-3|11;-2|21;1|36;2|1;3|14;4|1;6|1:-3|11;-2|19;1|36;2|1;3|12;4|2	0|1:0|-2:1.0:0.5:72:0:0|0:47.50|24.50:47.54:8:3:-2.07:-0.49:71:-2|22;0|23;3|6;7|3:-2|20;0|22;3|8
-22	16913709	STR_887810	AAAATGAAAATAAAAATAAAAATAGAAAA	AAAATGAAAATAAAAATAGAAAA	.	.	START=16913709;END=16913737;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16913769	STR_887811	TTTATTTATTTATTTATTTATTT	TTTATTTATTTATTTATTTTTTT	.	.	START=16913769;END=16913791;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16916504	STR_887812	ATTTGCATTTCATTCATTTCATTTC	ATTTGCATTTCATTCATTTCATGTC	.	.	START=16916504;END=16916528;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16916943	STR_887813	TATATATACATATATA	TATATATATATACACA,TATATATATATACACACA	.	.	START=16916943;END=16916958;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16917858	STR_887814	AAAAAAAAAAAAAAAAAA	AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA	.	.	START=16917858;END=16917875;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16920146	STR_887815	AAAAAAAAAAA	AAAAAAAAAA,AAAAAAAAAAAA	.	.	START=16920146;END=16920156;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:55:0:0|0:15.03|39.97:3.74:1:6:0.0:0.0:-2147483648:-2|1;-1|1;0|41:-2|1;0|33	0|0:0|0:1.0:1.0:79:0:0|0:39.50|39.50:15.1:3:7:0.0:0.0:-2147483648:-2|2;-1|4;0|60:-2|2;-1|1;0|51
-22	16921805	STR_887816	CTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCT	.	.	START=16921805;END=16921818;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|4:1.0:0.5:98:0:0|0:57.05|40.95:29.51:22:6:-0.95:-4.76:90:0|46;2|6;4|14;6|17:0|40;2|5;4|14;6|17	0|2:0|4:1.0:0.5:85:0:0|0:56.07|28.93:13.91:9:11:-2.69:-2.22:78:0|43;2|9;4|20:0|34;2|9;4|20
-22	16922373	STR_887817	AAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA	.	.	START=16922373;END=16922387;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:65:0:0|0:32.50|32.50:14.63:0:7:0.0:0.0:-2147483648:-6|1;-5|1;0|56;8|2:0|49	0|3:0|3:1.0:0.5:47:0:0|0:25.36|21.64:26.46:0:4:-0.22:-0.33:32:-21|1;-5|1;0|21;3|12:0|18;3|13
-22	16923679	STR_887818	AAAAAAAAAAAA	AAAAAAAAAAA,AAAAAAAAAAAAA	.	.	START=16923679;END=16923690;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:0.94:0.94:57:0:0|0:14.72|42.28:1.16:5:3:0.0:0.0:-2147483648:-16|1;-15|1;-2|3;0|35:-2|3;0|31	0|1:0|-1:0.99:0.5:51:0:0|0:40.94|10.06:2.36:6:1:-4.62:0.0:50:-16|1;-15|2;-5|1;-2|2;-1|2;0|25:-2|1;-1|3;0|22
-22	16925998	STR_887819	TATCTATATCTATTATCTATATCTATATCTATATCTATAT	TATCTATATCTATTATCTATATCTATATCTATAT,TATCTATATCTATATCTATATCTATAGCTATATCTATAT,TATATATATCTATTATCTATATCTATATCTATATCTATAT	.	.	START=16925998;END=16926037;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	2|0:-1|0:1.0:0.5:110:0:0|0:45.97|64.03:58.64:4:16:-1.1:-0.27:94:-19|1;-5|1;-1|17;0|23:-1|17;0|23	0|2:0|-1:1.0:0.5:130:0:0|0:62.37|67.63:55.12:2:19:-0.16:-0.63:103:-8|3;-1|35;0|20:-1|35;0|21
-22	16926610	STR_887820	AAAAAAAAAAA	AAAAAAAAAAAAA,AAAAAAAAAAAAAA	.	.	START=16926610;END=16926620;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16936762	STR_887821	AACAACAACAACAACA	AACAACAACAACAAAC	.	.	START=16936762;END=16936777;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:62:0:0|0:50.38|11.62:55.01:0:3:-6.82:-0.86:57:-7|1;0|53:0|51	0|1:0|0:1.0:0.5:58:0:0|0:40.18|17.82:146.91:0:0:-2.27:-0.42:58:0|44:0|43
-22	16937186	STR_887822	TATATATATATAT	.	.	.	START=16937186;END=16937198;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16938056	STR_887823	TTTTTTTTTCTTTTTTT	.	.	.	START=16938056;END=16938072;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:98:0:0|0:49.00|49.00:.:1:3:0.0:0.0:-2147483648:0|72;1|1:0|65;1|1	0|0:0|0:1.0:1.0:114:0:0|0:55.59|58.41:.:0:1:0.0:0.0:-2147483648:-14|1;0|75:0|65
-22	16939832	STR_887824	GGGAAGTGAAGGGAAGGGGGAGGAGAGGGGAAGGGAAGGGAAGGAAAGAAGGGAAGAAGGGAAGGGAAGGGAA	GGTAAGGGAAGGGAAGGGGGAGGAGAGGGGAAGGGAAGGGAAGGGAAGAAGGGAAGGGGAGGGAATGGAA,GGGAAGGGAAGGGAAGGGGGAGGAGAGGGGAAGGGAAGGGAAGGAAAGAAGGGAAGAAGGGAAGGGAAGGGAA,GGGAAGGGAAGGGAAGGGGGAGGAGAGGGGAAGGGAAGGGAAGGGAAGAAGGGAAGAAGGGAAGGGAAGGGAA	.	.	START=16939832;END=16939904;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|2:-3|0:1.0:0.5:94:0:0|0:14.94|79.06:62.7:0:14:-13.37:-1.46:84:-1|1;0|24:-3|1;0|18	.
-22	16944457	STR_887825	CTGCTGTGTGCTGCTGCTGCTG	.	.	.	START=16944457;END=16944478;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:48:0:0|0:24.00|24.00:.:1:1:0.0:0.0:-2147483648:0|32;3|1:0|31;3|1	0|0:0|0:1.0:1.0:46:0:0|0:23.00|23.00:.:3:5:0.0:0.0:-2147483648:0|24;3|2:0|23;3|2
-22	16945912	STR_887826	AAAAAAAAAAAA	AAAAAAAA	.	.	START=16945912;END=16945923;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16947897	STR_887827	AAAAAAAAAAA	AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA	.	.	START=16947897;END=16947907;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|7:1.0:0.5:85:0:0|0:58.46|26.54:10.12:7:3:-3.88:-0.56:68:0|50;6|6;7|11:0|43;6|6;7|11	0|3:0|7:1.0:0.5:82:0:0|0:53.52|28.48:7.95:10:3:-2.73:-1.04:61:0|43;1|1;6|6;7|8;8|4:0|38;1|1;6|6;7|8;8|3
-22	16950535	STR_887828	ACAAAAAAAAACAAAACAAACAAACAAACAAA	ACAAAAAAAACAAAACAAACAAACAAACAAT,ACAAAAAAACCAAAACAAACAAACAAACAAT,ACGAAAAAACCAAAACAAACAAACAAACAAA	.	.	START=16950535;END=16950566;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16954482	STR_887829	TTTGTTTGTTTTGTTTTGTTTT	TTTGTTTTTTTGTTTTGTTTTT,TTTGTTTTTTTTGTTTTGTTTTT,TTTGTTTGTTTGTCTTATTTTGTTTT	.	.	START=16954482;END=16954503;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|4:1.0:0.5:99:0:0|0:75.84|23.16:6.73:0:14:-8.74:-0.45:78:0|48;4|7:0|45;4|6	0|1:0|0:1.0:0.5:99:0:0|0:75.51|23.49:93.68:0:10:-8.49:0.0:86:0|43;4|6:0|43
-22	16956353	STR_887830	ATTCATTCATTTATTCATT	ATGCATTCATTTATTCATT,ATTAATTCATTTATTCATT	.	.	START=16956353;END=16956371;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16957300	STR_887831	ACACACACACACACACA	ACACAAACACACACACA,ACACACACACACACACACA	.	.	START=16957300;END=16957316;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:49:0:0|0:24.50|24.50:12.06:0:1:0.0:0.0:-2147483648:0|42:0|37	0|0:0|0:1.0:1.0:63:0:0|0:31.50|31.50:9.63:1:6:0.0:0.0:-2147483648:-16|1;0|37:0|34
-22	16961712	STR_887832	AAAAAAAAAAAATTAAAAAAAAAAAAAAGAAAA	AAAAAAAAAAAATTAAAAAAAAAAAAAGAAAA,AAAAAAAAAAATTAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAATTAAAAAAAAAAAAAGAAAA,AAAAAAAAAAATTAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAATTAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAATTAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAAATTAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAATTAAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAAATTAAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAATTAAAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAATTAAAAAAAAAAAAAAAAAAGAAAA,AAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAGAAAA	.	.	START=16961712;END=16961744;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	6|6:1|1:0.78:0.78:23:0:0|0:13.98|9.02:0.99:2:0:0.0:0.0:-2147483648:1|9;2|1:1|9;2|1	0|11:0|3:1.0:0.5:21:0:0|0:12.49|8.51:5.66:2:3:-0.37:-0.66:14:0|8;2|1;3|2;5|1:0|4;2|1;3|2
-22	16964778	STR_887833	AACAACAATAACAACAACAACA	.	.	.	START=16964778;END=16964799;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:130:0:0|0:68.00|62.00:.:0:0:0.0:0.0:-2147483648:0|91:0|89	0|0:0|0:1.0:1.0:129:0:0|0:67.05|61.95:.:0:1:0.0:0.0:-2147483648:0|93:0|87
-22	16965931	STR_887834	TGTGTGTGTGTGTGTGT	TGTGTGTGTGTGTGTGTGT,TGTGTGTGTGTGTGTGTGTGTGT,TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	START=16965931;END=16965947;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|12:1.0:0.5:52:0:0|0:44.01|7.99:9.68:2:2:-7.77:0.0:44:0|42;16|2:0|37;16|2	0|0:0|0:1.0:1.0:42:0:0|0:21.00|21.00:8.22:1:1:0.0:0.0:-2147483648:0|35:0|31
-22	16966999	STR_887835	TTATTTGTTTATTTATTTATTTATTT	TTATTTGTTTATTTATTTATTT	.	.	START=16966999;END=16967024;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|0:-4|0:1.0:0.5:51:0:0|0:12.50|38.50:4.23:0:0:-4.16:-1.35:42:-4|6;0|25:-4|6;0|24	0|0:0|0:1.0:1.0:62:0:0|0:31.00|31.00:3.58:10:5:0.0:0.0:-2147483648:-4|7;0|27:-4|7;0|27
-22	16969703	STR_887836	AAAAAGAAAAAAAAA	CAAAAGAAAAAAAA,CAAAAGAAAAAAAAA	.	.	START=16969703;END=16969717;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|-1:1.0:0.5:83:0:0|0:48.61|34.39:34.78:0:0:-0.87:-2.03:76:-1|22;0|40:-1|22;0|32	0|1:0|-1:1.0:0.5:87:0:0|0:45.33|41.67:50.97:0:0:-0.13:-1.9:84:-1|33;0|39:-1|31;0|37
-22	16970459	STR_887837	ACACACCCACACACACACCCACA	ACACACCCACACCCACACCCACA,ACACACCCACACCCACATCCACA	.	.	START=16970459;END=16970481;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:70:0:0|0:41.00|29.00:87.19:0:0:-0.81:-1.43:60:0|54:0|54	0|1:0|0:1.0:0.5:71:0:0|0:45.48|25.52:15.36:0:1:-1.92:-0.11:58:0|47:0|44
-22	16971240	STR_887838	TAAAATAAAATAAAAAAAAATTAAAAAAAATAA	TAAAATAAAATTAAAAAAAATTAAAAAAAATAA,TAAAATAAAATAAAAAAAAAATTAAAAAAAATAA	.	.	START=16971240;END=16971272;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:74:0:0|0:37.00|37.00:14.82:0:2:0.0:0.0:-2147483648:0|36:0|36	0|0:0|0:1.0:1.0:64:0:0|0:32.00|32.00:13.57:3:1:0.0:0.0:-2147483648:-12|1;0|33:0|33
-22	16981571	STR_887839	AAAAAAAAAAAAAAAAAAAAAAAAAA	AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	.	.	START=16981571;END=16981596;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|8:0|-1:1.0:0.5:43:0:0|0:21.93|21.07:6.75:0:2:0.0:-0.23:21:-10|1;-1|8;0|11:-1|9;0|7
-22	16982328	STR_887840	TTTTATTTTATTTTATT	.	.	.	START=16982328;END=16982344;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:63:0:0|0:45.00|18.00:71.93:0:0:-3.05:-5.17:63:0|43:0|43	0|0:0|0:1.0:0.5:68:0:0|0:43.89|24.11:45.07:0:2:-1.57:-6.06:67:0|48:0|46
-22	16984432	STR_887841	TTTTTTTTTCTTTTTT	TTTTTTTTTTCTTTTTT	.	.	START=16984432;END=16984447;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:0.5:107:0:0|0:30.28|76.72:126.68:19:0:-5.2:-0.18:107:0|65;1|19:0|65;1|19	0|0:0|0:1.0:0.5:91:0:0|0:37.00|54.00:105.45:11:2:-1.05:0.0:89:-15|1;0|56;1|8;2|1:0|51;1|8
-22	16985806	STR_887842	AAAAAAAAAAAAA	AAAAAAAAAAAAAA	.	.	START=16985806;END=16985818;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:49:0:0|0:24.50|24.50:11.57:2:1:0.0:0.0:-2147483648:-1|2;0|40:-1|2;0|37	0|0:0|0:1.0:1.0:45:0:0|0:22.50|22.50:9.9:3:1:0.0:0.0:-2147483648:-1|3;0|34:-1|2;0|31
-22	16986789	STR_887843	TTTATTTATTTATTT	.	.	.	START=16986789;END=16986803;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:59:0:0|0:29.50|29.50:.:0:1:0.0:0.0:-2147483648:0|40:0|38	0|0:0|0:1.0:1.0:48:0:0|0:32.00|16.00:.:0:0:0.0:0.0:-2147483648:0|32:0|32
-22	16987382	STR_887844	CTTTCCTTCTTTCTTTCTT	.	.	.	START=16987382;END=16987400;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:45:0:0|0:22.50|22.50:.:0:3:0.0:0.0:-2147483648:0|28:0|27
-22	16987413	STR_887845	CCCCTCCCCTCTCCTCCATTCCTCTCCCCTCCCCTC	CCCCTCCCCTCTCCTCCATTTCTTTCCCCTCCCCTC	.	.	START=16987413;END=16987448;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	0|0:0|0:1.0:1.0:25:0:0|0:12.50|12.50:5.12:0:1:0.0:0.0:-2147483648:0|13:0|13
-22	16987645	STR_887846	TTTTTTTTTTTTTTTTTTTTTTT	TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT	.	.	START=16987645;END=16987667;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|3:-1|-1:0.92:0.92:47:0:0|0:23.50|23.50:1.04:3:0:0.0:0.0:-2147483648:-2|1;-1|21;0|4:-2|1;-1|23	.
-22	16989583	STR_887848	TTTTTTTTTTTTT	TTTTTTTCTTT,TTTTTTTTTTTT	.	.	START=16989583;END=16989595;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16990569	STR_887849	TTTATTATTTATTTATTT	TTTTTTATTTATTTATTT	.	.	START=16990569;END=16990586;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:71:0:0|0:32.00|39.00:54.44:2:0:0.0:0.0:-2147483648:0|35:0|33	0|0:0|0:1.0:1.0:83:0:0|0:36.95|46.05:65.15:0:0:0.0:0.0:-2147483648:0|43:0|40
-22	16991060	STR_887850	CTGGCTGGCTGGCTG	.	.	.	START=16991060;END=16991074;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:82:0:0|0:41.00|41.00:21.96:0:0:0.0:0.0:-2147483648:0|62:0|58	0|0:0|0:1.0:1.0:86:0:0|0:43.00|43.00:23.15:0:0:0.0:0.0:-2147483648:0|64:0|60
-22	16992082	STR_887851	TTTTTTTTTTTTTT	TTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTCTTTTTTTTTTTT,TTTCTTTTTTTTTTTTT	.	.	START=16992082;END=16992095;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|2:1.0:0.5:76:0:0|0:31.00|45.00:20.03:12:1:-0.87:-0.78:76:0|22;1|1;2|29;3|12:0|17;2|24;3|12	0|3:0|2:1.0:0.5:105:0:0|0:53.97|51.03:6.65:23:4:-0.07:-0.26:105:-7|1;-2|2;0|26;1|15;2|36;3|7:0|19;1|14;2|31;3|7
-22	16992600	STR_887852	TTTTTTTTTTTTTTTTTTTTTTTT	TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	.	.	START=16992600;END=16992623;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16994014	STR_887853	AAAAAAAAAAAAA	AAAAAAAAAAA	.	.	START=16994014;END=16994026;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	16995509	STR_887854	AAAAAAAAAAAAAA	AAAAAAAAAAAAAAA,AAAAAAAAAAAAACA,AAAAAGAAAAAAAAA,AAAAAAAAAAAAAACA,AAAAAGAAAAAAAAAA,AAAAAAAAAAAAAAACA,AAAAAAAAAAAAAAAACA	.	.	START=16995509;END=16995522;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|1:1|1:1.0:0.5:49:0:0|0:13.53|35.47:25.53:1:1:-2.78:-2.05:46:0|3;1|37;2|1:1|34;2|1	0|3:0|1:0.84:0.42:40:0:0|0:31.46|8.54:0.72:17:2:-3.72:-1.55:37:0|13;1|16;2|4:0|13;1|14;2|3
-22	17000929	STR_887855	AAAAAAAAAAAAAAAA	AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAGA,AAAAAAAAAAAAAAAAGA,AAAAAAAAAAAAAAAAAGA	.	.	START=17000929;END=17000944;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|3:0|2:1.0:0.5:74:0:0|0:46.49|27.51:12.87:1:1:-1.74:-4.72:59:0|36;2|12;3|1;13|1:0|34;2|12;3|1	0|3:0|2:1.0:0.5:65:0:0|0:42.51|22.49:9.9:2:2:-1.95:-2.92:63:0|31;1|2;2|15:0|25;1|2;2|15
-22	17001798	STR_887856	GTGTGTGTGGGTGTGTG	GTGTGTGTGGGTGTGTGGGTGTGTG	.	.	START=17001798;END=17001814;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:87:0:0|0:36.10|50.90:127.44:0:2:0.0:0.0:-2147483648:-11|1;0|65:0|61	0|0:0|0:1.0:1.0:80:0:0|0:34.00|46.00:125.44:0:3:0.0:0.0:-2147483648:0|62:0|53
-22	17002979	STR_887857	TAAATAATTAAATAAATACATAAAT	CAAATAAGAAAATAAATACATAAAT	.	.	START=17002979;END=17003003;PERIOD=4	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:102:0:0|0:56.00|46.00:422.15:0:0:-0.43:-0.37:102:-21|1;0|59:0|56	0|1:0|0:1.0:0.5:88:0:0|0:42.00|46.00:402.93:0:0:-0.13:-0.28:88:-21|3;0|55:0|54
-22	17003249	STR_887858	TTTTCTTTTTTTTCTTTTTTTTTTT	TTTTCTCATTTTTCTTTTTTTTT,TTTTCTTTTTTTTCTTTTTTTTTT,TTTTCTTTTTTTTCTTTTTTTTTTTT	.	.	START=17003249;END=17003273;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	3|1:1|-2:1.0:0.5:112:0:0|0:53.02|58.98:40.67:1:3:-0.2:-0.24:110:-15|1;-14|1;-2|47;1|29;3|1:-2|42;1|28	0|1:0|-2:1.0:0.5:127:0:0|0:50.00|77.00:38.37:2:5:-1.71:-0.44:125:-34|1;-2|52;-1|1;0|31;4|1:-2|48;-1|1;0|25
-22	17005574	STR_887860	TTTTTTTTTTTTTTTTTTT	TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT	.	.	START=17005574;END=17005592;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|11:-8|5:1.0:0.5:65:0:0|0:29.57|35.43:13.99:1:6:-0.34:-0.43:46:-9|2;-8|6;-7|1;-5|1;0|1;5|16:-8|5;5|13	1|11:-8|5:0.81:0.41:57:0:0|0:25.17|31.83:0.64:20:8:-0.46:-0.47:41:-15|1;-9|4;-8|4;-7|2;2|8;5|1;6|11;8|2:-8|1;-7|2;2|7;6|8
-22	17006959	STR_887861	GTGGTTGGTGGTGGTGGTG	GTGGTTGGTGGTGGCAGTG	.	.	START=17006959;END=17006977;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:55:0:0|0:38.97|16.03:76.35:0:2:-2.85:-1.99:49:0|38:0|38	0|1:0|0:1.0:0.5:64:0:0|0:48.00|16.00:88.94:0:1:-4.24:-1.15:62:0|49:0|48
-22	17008626	STR_887863	CCTGGCCCTGGCCCTAGCCCTGGTCCTG	.	.	.	START=17008626;END=17008653;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:62:0:0|0:31.00|31.00:.:0:8:0.0:0.0:-2147483648:0|37;1|1:0|35	.
-22	17008991	STR_887864	CCTGGCCCTGACCCTGGCCCTGG	CCTGGCCCTGACCCTAGCCCTGG	.	.	START=17008991;END=17009013;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:46:0:0|0:23.00|23.00:10.18:0:5:0.0:0.0:-2147483648:-24|1;0|22:0|22	0|0:0|0:1.0:1.0:44:0:0|0:22.00|22.00:10.13:0:4:0.0:0.0:-2147483648:0|33:0|30
-22	17009341	STR_887865	TGCCCTGCCCTGCCCTGCCCTG	TGCCCTGCCCTGCCCTGCCCTGCCCTG	.	.	START=17009341;END=17009362;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	17009794	STR_887866	CCTGGTCCTGCCCAGGCCCTGGCCCTGGCCCTGCCCTGGCTGTTCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGGCCTGCCTTGGCCCT	CCTGGTCCTGCCCAGGCCCTGGCCCTGGCCCTGCCCTGGCTGTTCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGTCCTGCCTTGCCCT,CCTGGTCCTGCCCAGGCCCTGGCCCTGGCCCTGCCCTGGCTGTTCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGTCCTGCCTTGGCCCT	.	.	START=17009794;END=17009891;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	17010324	STR_887867	CCCTGCCCTGGCCCTGCCCTCCCTTTGGCCCTGCCCTG	CCCTGCCCTTGCCCTGCCCTCCCTTTGGCCCTGCCCTG	.	.	START=17010324;END=17010361;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:61:0:0|0:20.90|40.10:6.93:0:8:0.0:0.0:-2147483648:-23|1;-10|1;-4|1;0|32:0|28	0|0:0|0:1.0:1.0:50:0:0|0:17.47|32.53:7.38:0:6:0.0:0.0:-2147483648:0|31;8|1:0|28
-22	17010846	STR_887869	CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCC	CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCC,CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCC,CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCC,CCCTGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCCCTGTCC	.	.	START=17010846;END=17010889;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:37:0:0|0:18.50|18.50:4.93:0:4:0.0:0.0:-2147483648:-1|1;0|18;9|1:0|16	.
-22	17010945	STR_887870	CCTGGTCCTGGCCCTGGCCCTG	CCTGGTCCTGGCCCTGGCTCTG	.	.	START=17010945;END=17010966;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	1|0:0|0:1.0:0.5:33:0:0|0:4.50|28.50:3.0:0:2:-6.09:0.0:26:0|21:0|20	1|0:0|0:1.0:0.5:47:0:0|0:11.34|35.66:31.36:0:4:-4.38:-0.18:37:0|32:0|29
-22	17011373	STR_887871	GCCCTGGCCCTGGCCCTG	GCCCTGGCCCCGGCCCTGGCCCTG	.	.	START=17011373;END=17011390;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	17012405	STR_887872	GCCCTGGCCCTGGCCTGAGCATTGGCCCTGGCCCTG	GCCCTGTCCCTGGCCTGAGCATTGGCCCTGGCCCTG,GCCCTGTCCCTGGCCTGAGCATTGGTCCTGGCCCTG	.	.	START=17012405;END=17012440;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:74:0:0|0:45.22|28.78:73.59:0:4:-1.02:-1.51:71:0|47:0|47	0|1:0|0:1.0:0.5:63:0:0|0:32.50|30.50:59.62:0:3:-0.05:-2.17:54:0|33:0|30
-22	17013165	STR_887873	TGCCCTGCCCTGGCCTTGCCCTTCCCTGGCCTTGCCCTGCCCTG	TGCCCTGCCCTGGCCTTGCCCTTCCCTGGCCTTGCCCTGCCCTGG	.	.	START=17013165;END=17013208;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	17013288	STR_887874	CCCTGGCCCTGCCCTTGCTCTGGCCCTGTCCCTGGCTCAGCCTTGACCCTGGCCCTGGCCCTG	CCCTGGCCCTGCCCTTGCTCTGGCCCTGTAGCTGGCTCAGCCTTGACCCTGACCCTGGCCCTG,CCCTGGCCCTGCCCTTGCTCTGGCCCTGTCGCTGGCTCAGCCTTGACCCTGACCCTGGCCCTG	.	.	START=17013288;END=17013350;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	17013478	STR_887875	GCCCTGCCCTACCCTGGCCTTGCCCTGCCCTGGCCCTGCCTTTGGCCTGCCCTG	GCCCTGCCCTACCCTGGCATTGCCCTGCCCTGGCCCTGCCTTTGGCCTGCCCTG,GCCCTGCCCTACCCTGGCGTTGCCCTGCCCTGGCCCTGCCTTTGGCCTGCCCTG	.	.	START=17013478;END=17013531;PERIOD=5	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	.	.
-22	17013794	STR_887876	CTGGCCCTGATCCTGCCATGGCCCTGGCCCTGCCATGTCCCTGCCCTGGCCCTGG	CTGGCCCTGATACTGCCATGGCCCTGGCCCGGCCATGTCCCTGCCCTGGCCCTGG,CTGGCCCTGATACTGCCATGGCCCTGGCCCTGCCATGTCCCTGCCCTGGCCCTGG,CTGGCCCTGATCCTGCCATGGCCCTCGCCCTGCCATGTCCCTGCCCTGGCCCTGG	.	.	START=17013794;END=17013848;PERIOD=6	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|0:1.0:0.5:69:0:0|0:45.52|23.48:45.32:0:10:-2.09:0.0:64:-57|1;-26|1;-18|1;-11|2;0|28;9|1:0|27	0|2:0|0:1.0:0.5:73:0:0|0:42.50|30.50:50.41:0:5:-0.77:-0.37:64:-12|1;0|35;7|1:0|33
-22	17018608	STR_887878	TTTTTTTTATTTTTT	TTTTTTTTTATTTTTT	.	.	START=17018608;END=17018622;PERIOD=1	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|0:0|0:1.0:1.0:49:0:0|0:24.50|24.50:11.32:1:2:0.0:0.0:-2147483648:0|35:0|32	0|0:0|0:1.0:1.0:38:0:0|0:19.00|19.00:7.11:2:2:0.0:0.0:-2147483648:-1|2;0|22:0|20
diff --git a/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrdercurrent b/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrdercurrent
deleted file mode 120000
index 5965a1b7..00000000
--- a/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrdercurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_SameContigsDifferentOrder0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_advntr_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_advntr_output0/test.vcf
deleted file mode 100644
index dfad43b7..00000000
--- a/trtools/mergeSTR/tests/mydir/test_advntr_output0/test.vcf
+++ /dev/null
@@ -1,15 +0,0 @@
-##fileformat=VCFv4.1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##source=adVNTR ver. 1.3.3
-##contig=<ID=chr21,length=48129895>
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
-##INFO=<ID=VID,Number=1,Type=Integer,Description="VNTR ID">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
-##INFO=<ID=RC,Number=1,Type=Integer,Description="Reference repeat unit count">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read depth">
-##FORMAT=<ID=SR,Number=1,Type=Integer,Description="Spanning read count">
-##FORMAT=<ID=FR,Number=1,Type=Integer,Description="Flanking read count">
-##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	CSTB_2_5_testdata.bam	CSTB_3_5_testdata.bam
-chr21	45196323	.	GCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGG	GCGCGGGGCGGGGCGCGGGGCGGG,GCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGG	.	.	END=45196359;VID=301645;RU=GCGCGGGGCGGG;RC=3	GT:DP:SR:FR:ML	1/2:60:39:21:1.0	0/0:58:37:21:1.0
diff --git a/trtools/mergeSTR/tests/mydir/test_advntr_outputcurrent b/trtools/mergeSTR/tests/mydir/test_advntr_outputcurrent
deleted file mode 120000
index 34916365..00000000
--- a/trtools/mergeSTR/tests/mydir/test_advntr_outputcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_advntr_output0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0/test.vcf b/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0/test.vcf
deleted file mode 100644
index e7228875..00000000
--- a/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0/test.vcf
+++ /dev/null
@@ -1,126 +0,0 @@
-##fileformat=VCFv4.1
-##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
-##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
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-##contig=<ID=GL000236.1,length=41934>
-##contig=<ID=GL000241.1,length=42152>
-##contig=<ID=GL000243.1,length=43341>
-##contig=<ID=GL000242.1,length=43523>
-##contig=<ID=GL000230.1,length=43691>
-##contig=<ID=GL000237.1,length=45867>
-##contig=<ID=GL000233.1,length=45941>
-##contig=<ID=GL000204.1,length=81310>
-##contig=<ID=GL000198.1,length=90085>
-##contig=<ID=GL000208.1,length=92689>
-##contig=<ID=GL000191.1,length=106433>
-##contig=<ID=GL000227.1,length=128374>
-##contig=<ID=GL000228.1,length=129120>
-##contig=<ID=GL000214.1,length=137718>
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-##contig=<ID=GL000209.1,length=159169>
-##contig=<ID=GL000218.1,length=161147>
-##contig=<ID=GL000220.1,length=161802>
-##contig=<ID=GL000213.1,length=164239>
-##contig=<ID=GL000211.1,length=166566>
-##contig=<ID=GL000199.1,length=169874>
-##contig=<ID=GL000217.1,length=172149>
-##contig=<ID=GL000216.1,length=172294>
-##contig=<ID=GL000215.1,length=172545>
-##contig=<ID=GL000205.1,length=174588>
-##contig=<ID=GL000219.1,length=179198>
-##contig=<ID=GL000224.1,length=179693>
-##contig=<ID=GL000223.1,length=180455>
-##contig=<ID=GL000195.1,length=182896>
-##contig=<ID=GL000212.1,length=186858>
-##contig=<ID=GL000222.1,length=186861>
-##contig=<ID=GL000200.1,length=187035>
-##contig=<ID=GL000193.1,length=189789>
-##contig=<ID=GL000194.1,length=191469>
-##contig=<ID=GL000225.1,length=211173>
-##contig=<ID=GL000192.1,length=547496>
-##contig=<ID=NC_007605,length=171823>
-##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
-##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
-##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
-##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
-##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
-##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
-##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
-##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
-##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
-##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
-##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
-##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
-##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
-##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
-##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
-##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
-##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
-##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
-##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
-##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
-##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
-##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
-##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
-##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
-##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
-##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	GTEX-R55C-0003	GTEX-R55C-0004
-1	16717	STR_2	GGTGGTGGTGGGGGCGGTGGGGGTGGTG	GGTGGTGGTGGGGGCGGTGGTGGTGCTG	.	.	START=16717;END=16744;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|0:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
diff --git a/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffecurrent b/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffecurrent
deleted file mode 120000
index 085dcced..00000000
--- a/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffecurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_alt_same_len_as_ref_diffe0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_duplicate_ids0/test.vcf b/trtools/mergeSTR/tests/mydir/test_duplicate_ids0/test.vcf
deleted file mode 100644
index b4cfe0d4..00000000
--- a/trtools/mergeSTR/tests/mydir/test_duplicate_ids0/test.vcf
+++ /dev/null
@@ -1,43 +0,0 @@
-##fileformat=VCFv4.1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr10,length=130694993>
-##contig=<ID=chr11,length=122082543>
-##contig=<ID=chr12,length=120129022>
-##contig=<ID=chr13,length=120421639>
-##contig=<ID=chr14,length=124902244>
-##contig=<ID=chr15,length=104043685>
-##contig=<ID=chr16,length=98207768>
-##contig=<ID=chr17,length=94987271>
-##contig=<ID=chr18,length=90702639>
-##contig=<ID=chr19,length=61431566>
-##contig=<ID=chr1,length=195471971>
-##contig=<ID=chr2,length=182113224>
-##contig=<ID=chr3,length=160039680>
-##contig=<ID=chr4,length=156508116>
-##contig=<ID=chr5,length=151834684>
-##contig=<ID=chr6,length=149736546>
-##contig=<ID=chr7,length=145441459>
-##contig=<ID=chr8,length=129401213>
-##contig=<ID=chr9,length=124595110>
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
-##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
-##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
-##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
-##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
-##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
-##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
-##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
-##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
-##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
-##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
-##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
diff --git a/trtools/mergeSTR/tests/mydir/test_duplicate_idscurrent b/trtools/mergeSTR/tests/mydir/test_duplicate_idscurrent
deleted file mode 120000
index 55ebd489..00000000
--- a/trtools/mergeSTR/tests/mydir/test_duplicate_idscurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_duplicate_ids0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0/test.vcf b/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0/test.vcf
deleted file mode 100644
index 0fb7220b..00000000
--- a/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0/test.vcf
+++ /dev/null
@@ -1,22 +0,0 @@
-##fileformat=VCFv4.1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chrX,length=156508116>
-##ALT=<ID=STR18,Description="Allele comprised of 18 repeat units">
-##ALT=<ID=STR16,Description="Allele comprised of 16 repeat units">
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant">
-##INFO=<ID=REF,Number=1,Type=Integer,Description="Reference copy number">
-##INFO=<ID=REPID,Number=1,Type=String,Description="Repeat identifier as specified in the variant catalog">
-##INFO=<ID=RL,Number=1,Type=Integer,Description="Reference length in bp">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat unit in the reference orientation">
-##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
-##INFO=<ID=VARID,Number=1,Type=String,Description="Variant identifier as specified in the variant catalog">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=ADFL,Number=1,Type=String,Description="Number of flanking reads consistent with the allele">
-##FORMAT=<ID=ADIR,Number=1,Type=String,Description="Number of in-repeat reads consistent with the allele">
-##FORMAT=<ID=ADSP,Number=1,Type=String,Description="Number of spanning reads consistent with the allele">
-##FORMAT=<ID=LC,Number=1,Type=Float,Description="Locus coverage">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence interval for REPCN">
-##FORMAT=<ID=REPCN,Number=1,Type=String,Description="Number of repeat units spanned by the allele">
-##FORMAT=<ID=SO,Number=1,Type=String,Description="Type of reads that support the allele; can be SPANNING, FLANKING, or INREPEAT meaning that the reads span, flank, or are fully contained in the repeat">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	N27483924	NSDFSDFSDF	NA12878_S1_HTT
-chrX	3076603	.	C	<STR16>	.	.	END=3076660;REF=19;REPID=HTT;RL=57;RU=CAG;VARID=HTT	GT:ADFL:ADIR:ADSP:LC:REPCI:REPCN:SO	0:319:0:4:34.624012:19-19:19:SPANNING	0/0:319/319:0/0:4/4:34.624012:19-19/19-19:19/19:SPANNING/SPANNING	1:319:0:4:34.624012:16-16:16:SPANNING
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_altcurrent b/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_altcurrent
deleted file mode 120000
index 4c430896..00000000
--- a/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_altcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_eh_mixed_ploidy_no_alt0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_no_alt0/test.vcf b/trtools/mergeSTR/tests/mydir/test_eh_no_alt0/test.vcf
deleted file mode 100644
index 93e52e73..00000000
--- a/trtools/mergeSTR/tests/mydir/test_eh_no_alt0/test.vcf
+++ /dev/null
@@ -1,22 +0,0 @@
-##fileformat=VCFv4.1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr4,length=156508116>
-##ALT=<ID=STR18,Description="Allele comprised of 18 repeat units">
-##ALT=<ID=STR16,Description="Allele comprised of 16 repeat units">
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant">
-##INFO=<ID=REF,Number=1,Type=Integer,Description="Reference copy number">
-##INFO=<ID=REPID,Number=1,Type=String,Description="Repeat identifier as specified in the variant catalog">
-##INFO=<ID=RL,Number=1,Type=Integer,Description="Reference length in bp">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat unit in the reference orientation">
-##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
-##INFO=<ID=VARID,Number=1,Type=String,Description="Variant identifier as specified in the variant catalog">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=ADFL,Number=1,Type=String,Description="Number of flanking reads consistent with the allele">
-##FORMAT=<ID=ADIR,Number=1,Type=String,Description="Number of in-repeat reads consistent with the allele">
-##FORMAT=<ID=ADSP,Number=1,Type=String,Description="Number of spanning reads consistent with the allele">
-##FORMAT=<ID=LC,Number=1,Type=Float,Description="Locus coverage">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence interval for REPCN">
-##FORMAT=<ID=REPCN,Number=1,Type=String,Description="Number of repeat units spanned by the allele">
-##FORMAT=<ID=SO,Number=1,Type=String,Description="Type of reads that support the allele; can be SPANNING, FLANKING, or INREPEAT meaning that the reads span, flank, or are fully contained in the repeat">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA12878_S1_HTT	N27483924
-chr4	3076603	.	C	<STR16>,<STR18>	.	.	END=3076660;REF=19;REPID=HTT;RL=57;RU=CAG;VARID=HTT	GT:ADFL:ADIR:ADSP:LC:REPCI:REPCN:SO	1/2:319/320:0/0:4/7:34.624012:16-16/18-18:16/18:SPANNING/SPANNING	0/0:319/320:0/0:4/7:34.624012:19-19/19-19:19/19:SPANNING/SPANNING
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_no_altcurrent b/trtools/mergeSTR/tests/mydir/test_eh_no_altcurrent
deleted file mode 120000
index 7cb532b2..00000000
--- a/trtools/mergeSTR/tests/mydir/test_eh_no_altcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_eh_no_alt0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_eh_output0/test.vcf
deleted file mode 100644
index a374ca72..00000000
--- a/trtools/mergeSTR/tests/mydir/test_eh_output0/test.vcf
+++ /dev/null
@@ -1,22 +0,0 @@
-##fileformat=VCFv4.1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr4,length=156508116>
-##ALT=<ID=STR18,Description="Allele comprised of 18 repeat units">
-##ALT=<ID=STR16,Description="Allele comprised of 16 repeat units">
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant">
-##INFO=<ID=REF,Number=1,Type=Integer,Description="Reference copy number">
-##INFO=<ID=REPID,Number=1,Type=String,Description="Repeat identifier as specified in the variant catalog">
-##INFO=<ID=RL,Number=1,Type=Integer,Description="Reference length in bp">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat unit in the reference orientation">
-##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
-##INFO=<ID=VARID,Number=1,Type=String,Description="Variant identifier as specified in the variant catalog">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=ADFL,Number=1,Type=String,Description="Number of flanking reads consistent with the allele">
-##FORMAT=<ID=ADIR,Number=1,Type=String,Description="Number of in-repeat reads consistent with the allele">
-##FORMAT=<ID=ADSP,Number=1,Type=String,Description="Number of spanning reads consistent with the allele">
-##FORMAT=<ID=LC,Number=1,Type=Float,Description="Locus coverage">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence interval for REPCN">
-##FORMAT=<ID=REPCN,Number=1,Type=String,Description="Number of repeat units spanned by the allele">
-##FORMAT=<ID=SO,Number=1,Type=String,Description="Type of reads that support the allele; can be SPANNING, FLANKING, or INREPEAT meaning that the reads span, flank, or are fully contained in the repeat">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA12878_S1_HTT	NA12822_S1_HTT
-chr4	3076603	.	C	<STR15>,<STR16>,<STR18>	.	.	END=3076660;REF=19;REPID=HTT;RL=57;RU=CAG;VARID=HTT	GT:ADFL:ADIR:ADSP:LC:REPCI:REPCN:SO	2/3:319/320:0/0:4/7:34.624012:16-16/18-18:16/18:SPANNING/SPANNING	1/1:310/322:0/0:3/6:33.46102:15-15/19-19:15/19:SPANNING/SPANNING
diff --git a/trtools/mergeSTR/tests/mydir/test_eh_outputcurrent b/trtools/mergeSTR/tests/mydir/test_eh_outputcurrent
deleted file mode 120000
index 2e7c9b8b..00000000
--- a/trtools/mergeSTR/tests/mydir/test_eh_outputcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_eh_output0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_gangstr_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_gangstr_output0/test.vcf
deleted file mode 100644
index b1d1cc54..00000000
--- a/trtools/mergeSTR/tests/mydir/test_gangstr_output0/test.vcf
+++ /dev/null
@@ -1,2727 +0,0 @@
-##fileformat=VCFv4.1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0366_BXD196_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0366_BXD196/res_chr1
-##command=GangSTR-2.4.2.12-9da7 --bam /scratch/bams/drive3/4512-JFI-0358_BXD40_TyJ_phased_possorted_bam.bam --regions /scratch/regions/0705_mm10.bed --ref /scratch/ref/mm10.fa --str-info /scratch/strinfo/100519_mm10_strinfo_wo_stutt_recalc_many_samples.bed --chrom chr1 --trim-to-readlength 128 --drop-dupes --out result/4512-JFI-0358_BXD40_TyJ/res_chr1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##contig=<ID=chr10,length=130694993>
-##contig=<ID=chr11,length=122082543>
-##contig=<ID=chr12,length=120129022>
-##contig=<ID=chr13,length=120421639>
-##contig=<ID=chr14,length=124902244>
-##contig=<ID=chr15,length=104043685>
-##contig=<ID=chr16,length=98207768>
-##contig=<ID=chr17,length=94987271>
-##contig=<ID=chr18,length=90702639>
-##contig=<ID=chr19,length=61431566>
-##contig=<ID=chr1,length=195471971>
-##contig=<ID=chr2,length=182113224>
-##contig=<ID=chr3,length=160039680>
-##contig=<ID=chr4,length=156508116>
-##contig=<ID=chr5,length=151834684>
-##contig=<ID=chr6,length=149736546>
-##contig=<ID=chr7,length=145441459>
-##contig=<ID=chr8,length=129401213>
-##contig=<ID=chr9,length=124595110>
-##INFO=<ID=END,Number=1,Type=Integer,Description="End position of variant">
-##INFO=<ID=RU,Number=1,Type=String,Description="Repeat motif">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Repeat period (length of motif)">
-##INFO=<ID=REF,Number=1,Type=Float,Description="Reference copy number">
-##INFO=<ID=EXPTHRESH,Number=1,Type=Integer,Description="Threshold for calling expansions">
-##INFO=<ID=STUTTERUP,Number=1,Type=Float,Description="Stutter model - up prob">
-##INFO=<ID=STUTTERDOWN,Number=1,Type=Float,Description="Stutter model - down prob">
-##INFO=<ID=STUTTERP,Number=1,Type=Float,Description="Stutter model - p">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Quality Score (posterior probability)">
-##FORMAT=<ID=REPCN,Number=2,Type=Integer,Description="Genotype given in number of copies of the repeat motif">
-##FORMAT=<ID=REPCI,Number=1,Type=String,Description="Confidence intervals">
-##FORMAT=<ID=RC,Number=1,Type=String,Description="Number of reads in each class (enclosing, spanning, FRR, bounding)">
-##FORMAT=<ID=ENCLREADS,Number=1,Type=String,Description="Summary of reads in enclosing class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=FLNKREADS,Number=1,Type=String,Description="Summary of reads in flanking class. Keys are number of copies and values show number of reads with that many copies.">
-##FORMAT=<ID=ML,Number=1,Type=Float,Description="Maximum likelihood">
-##FORMAT=<ID=INS,Number=2,Type=Float,Description="Insert size mean and stddev">
-##FORMAT=<ID=STDERR,Number=2,Type=Float,Description="Bootstrap standard error of each allele">
-##FORMAT=<ID=QEXP,Number=3,Type=Float,Description="Prob. of no expansion, 1 expanded allele, both expanded alleles">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	BXD196_0366	BXD40_TyJ_0358
-chr1	3004986	.	TCTGTCTGTCTG	.	.	.	END=3004997;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999912:3,3:3-3,3-3:17,12,0,2:3,17:2,2:193.56:366.612,131.36:0.0,0.0:0.0,5.1188e-05,0.999949	0/0:10:0.888534:3,3:3-3,3-3:6,4,0,0:3,6:NULL:61.3218:326.675,113.385:0.0,0.0:4.48253e-20,0.0502949,0.949783
-chr1	3005549	.	AAAACAAAACAAAACAAAAC	.	.	.	END=3005568;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:181.959:366.612,131.36:0.0,0.0:0.0,8.11654e-06,0.999994	0/0:15:0.997039:4,4:4-4,4-4:12,3,0,0:4,12:NULL:73.0332:326.675,113.385:0.0,0.0:1.26878e-38,0.00169958,0.998307
-chr1	3009351	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3009402;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.597778:24,24:22-24,22-24:7,10,0,10:23,2|24,5:5,1|6,2|7,1|8,3|9,1|11,1|12,1:204.961:366.612,131.36:0.647588,0.647588:0.977848,0.0221963,7.63327e-09	0/0:26:0.389735:26,26:24-27,24-27:4,9,0,10:26,4:4,1|5,2|6,1|9,1|12,1|16,1|19,1|22,2:180.81:326.675,113.385:1.00776,1.00776:5.15603e-05,0.319906,0.680058
-chr1	3011925	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATA,TATATATATATATATATATATATATA	.	.	END=3011970;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:24:0.941159:13,13:11-13,11-13:9,12,0,0:13,9:NULL:154.4:366.612,131.36:0.623055,0.623055:1.0,0.0,0.0	1/1:4:0.00116485:4,4:2-7,2-7:0,4,0,0:NULL:NULL:36.0216:326.675,113.385:2.01694,2.01694:0.320181,0.553256,0.12662
-chr1	3013640	.	TTTGTTTGTTTGTTTG	.	.	.	END=3013655;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999747:4,4:3-4,3-4:15,9,0,2:4,15:3,2:152.109:366.612,131.36:0.298675,0.298675:0.0,0.000127996,0.999873	0/0:13:0.976022:4,4:4-4,4-4:9,4,0,0:4,9:NULL:70.0754:326.675,113.385:0.0,0.0:1.01814e-29,0.0139402,0.986089
-chr1	3021480	.	ATGATGATGATG	.	.	.	END=3021491;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999619:4,4:4-4,4-4:15,12,0,0:4,15:NULL:172.657:366.612,131.36:0.0,0.0:0.0,0.000249006,0.999751	0/0:35:1.0:4,4:4-4,4-4:21,14,0,0:4,21:NULL:202.925:326.675,113.385:0.0,0.0:0.0,5.06534e-06,0.999995
-chr1	3029298	.	AGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAG	.	.	END=3029309;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0250924:10,10:1-13,1-13:0,9,0,2:NULL:10,2:102.272:366.612,131.36:4.66296,4.66296:4.77053e-15,0.489352,0.510706	0/0:51:1.0:6,6:6-6,6-6:37,14,0,0:6,37:NULL:279.964:326.675,113.385:0.0,0.0:0.0,6.57464e-11,1.0
-chr1	3030350	.	TTTATTTATTTA	.	.	.	END=3030361;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:18,16,0,2:3,18:2,2:235.97:366.612,131.36:0.0,0.0:0.0,6.94948e-06,0.999994	0/0:29:0.99982:3,3:3-3,3-3:15,11,0,3:3,15:2,3:178.082:326.675,113.385:0.0,0.0:0.0,8.74391e-05,0.999917
-chr1	3034212	.	ATCTATCTATCT	.	.	.	END=3034223;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:216.349:366.612,131.36:0.0,0.0:0.0,7.31421e-06,0.999994	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:295.256:326.675,113.385:0.0,0.0:0.0,1.88135e-07,1.0
-chr1	3045469	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA	.	.	END=3045496;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.219972:21,21:19-21,19-21:3,9,0,2:21,3:14,2:117.372:366.612,131.36:0.822319,0.822319:0.0,0.0,1.0	0/0:61:0.993315:14,14:13-14,13-14:20,21,0,20:13,3|14,17:4,1|5,2|6,2|8,2|9,2|10,3|12,3|13,5:450.41:326.675,113.385:0.21692,0.21692:3.05269e-18,0.00668016,0.993338
-chr1	3050738	.	TATTTATTTATTTATTTATTTATTTATT	TATTTATTTATT	.	.	END=3050765;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0818061:3,3:1-6,1-6:0,12,0,2:NULL:3,2:123.205:366.612,131.36:1.27442,1.27442:1.0,0.0,0.0	0/0:33:0.999981:7,7:7-7,7-7:18,9,0,6:7,18:5,5|6,1:198.876:326.675,113.385:0.0,0.0:0.0,1.1874e-05,0.999987
-chr1	3050955	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3051002;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.569695:19,19:17-20,17-20:15,8,0,8:17,3|18,2|19,10:6,1|7,2|12,1|13,2|16,1|17,1:221.818:366.612,131.36:0.927845,0.927845:1.0,0.0,0.0	0/0:45:0.624164:24,24:23-24,23-24:12,14,0,19:23,4|24,8:5,1|7,2|9,1|11,3|12,1|14,1|16,2|18,3|21,1|22,3|23,1:336.158:326.675,113.385:0.437216,0.437216:1.08153e-07,0.371064,0.628986
-chr1	3051394	.	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG,TTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGGTTTTTGG	.	.	END=3051533;RU=tttttgg;PERIOD=7;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/4:44:0.271392:17,33:12-22,27-40:0,8,11,24:NULL:3,3|4,2|5,2|6,1|7,1|8,1|9,1|10,1|11,3|12,1|14,1|15,2|16,1|17,4:373.0:366.612,131.36:3.3949,3.70244:0.0,0.99537,0.00464368	1/3:64:0.735437:6,24:5-14,21-31:6,13,7,34:5,2|6,2|11,2:3,6|4,1|5,6|6,3|7,1|8,2|9,3|10,1|12,2|13,2|14,3|15,1|16,3:567.888:326.675,113.385:2.62352,2.31001:0.0,1.0,0.0
-chr1	3062124	.	ATACATACATACATACATACATACATACATACATACATACATAC	.	.	.	END=3062167;RU=atac;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999926:11,11:11-16,11-16:16,17,0,12:11,16:4,2|5,5|6,1|7,1|10,3:309.428:366.612,131.36:1.95404,1.95404:9.34602e-34,3.55638e-05,0.999964	0/0:67:1.0:11,11:11-11,11-11:33,10,0,24:11,33:2,1|3,2|4,5|5,3|7,5|8,2|9,3|10,3:408.226:326.675,113.385:0.0,0.0:0.0,7.09676e-10,1.0
-chr1	3063324	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=3063367;RU=attt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0401205:7,7:7-10,7-10:0,6,0,4:NULL:3,3|4,1:84.8502:366.612,131.36:1.35575,1.35575:0.460155,0.439871,0.100118	0/0:49:0.999985:11,11:3-11,3-11:18,18,0,11:11,18:4,1|5,1|6,1|7,3|8,3|10,2:326.395:326.675,113.385:3.17431,3.17431:3.81225e-40,2.08506e-05,0.999979
-chr1	3068357	.	TGTGTGTGTGTG	TGTGTGTGTG	.	.	END=3068368;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.0:5,5:5-5,5-5:28,14,0,0:5,28:NULL:237.617:366.612,131.36:0.0,0.0:1.0,3.0363e-08,0.0	0/0:56:1.0:6,6:6-6,6-6:34,16,0,4:6,34:5,4:310.554:326.675,113.385:0.0,0.0:0.0,2.88506e-10,1.0
-chr1	3072369	.	TTTATTTATTTA	.	.	.	END=3072380;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999994:3,3:3-3,3-3:19,18,0,0:3,19:NULL:243.124:366.612,131.36:0.0,0.0:0.0,1.2668e-05,0.999987	0/0:55:1.0:3,3:3-3,3-3:38,14,0,3:3,38:2,3:300.933:326.675,113.385:0.0,0.0:0.0,9.70525e-12,1.0
-chr1	3072798	.	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	.	END=3072822;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999778:5,5:5-5,5-5:14,17,0,5:5,14:3,3|4,2:248.589:366.612,131.36:0.0,0.0:0.0,0.000141535,0.999858	0/0:57:1.0:5,5:5-5,5-5:24,24,0,9:5,24:3,6|4,3:383.48:326.675,113.385:0.0,0.0:0.0,2.30288e-07,1.0
-chr1	3074617	.	GAAAGAAAGAAA	.	.	.	END=3074628;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:31,7,0,0:3,31:NULL:187.183:366.612,131.36:0.0,0.0:0.0,1.99785e-09,1.0	0/0:56:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:290.927:326.675,113.385:0.0,0.0:0.0,9.75116e-13,1.0
-chr1	3074661	.	CATGCATGCATGCATG	CATGCATGCATGCATGCATG	.	.	END=3074676;RU=catg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999956:5,5:5-5,5-5:18,13,0,0:5,18:NULL:190.145:366.612,131.36:0.0,0.0:0.0,2.90782e-05,0.999972	0/0:45:1.0:4,4:4-4,4-4:34,11,0,0:4,34:NULL:240.772:326.675,113.385:0.0,0.0:0.0,6.64784e-10,1.0
-chr1	3078669	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3078700;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:31:0.0317504:36,36:33-36,33-36:0,9,0,21:NULL:6,2|7,1|12,4|15,1|18,2|19,1|21,1|22,1|25,2|26,1|30,2|31,1|33,2:249.104:366.612,131.36:0.717805,0.717805:0.0,0.0,1.0	0/1:70:0.398947:16,19:16-16,4-19:31,19,0,18:15,4|16,25|17,2:6,2|7,1|8,2|9,4|12,2|13,1|14,3|15,1|18,1|19,1:487.907:326.675,113.385:0.0,5.6364:6.95224e-32,1.39769e-10,1.0
-chr1	3079448	.	TAAATAAATAAA	.	.	.	END=3079459;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.993512:3,3:3-3,3-3:9,19,0,2:3,9:2,1|3,1:217.894:366.612,131.36:0.0,0.0:6.05535e-38,0.00285955,0.997148	0/0:59:1.0:3,3:3-3,3-3:34,25,0,0:3,34:NULL:363.805:326.675,113.385:0.0,0.0:0.0,9.55245e-10,1.0
-chr1	3079495	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=3079545;RU=aag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.313861:24,24:22-25,22-25:2,16,0,8:24,2:8,1|10,1|11,1|15,1|20,2|22,1|24,1:218.24:366.612,131.36:0.736676,0.736676:0.0,0.0,1.0	0/0:64:0.999927:17,17:17-17,17-17:17,25,0,20:17,17:4,1|6,1|7,1|9,1|10,5|11,2|12,2|13,2|14,1|15,1|16,3:456.172:326.675,113.385:0.220506,0.220506:3.04352e-34,3.54294e-05,0.999964
-chr1	3083387	.	TGACTTGACTTGACT	.	.	.	END=3083401;RU=tgact;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,22,0,0:3,23:NULL:298.503:366.612,131.36:0.0,0.0:0.0,7.11885e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:34,13,0,3:3,34:2,3:273.285:326.675,113.385:0.0,0.0:0.0,2.83012e-10,1.0
-chr1	3086726	.	ACCCACCCACCC	.	.	.	END=3086737;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.99608:3,3:3-3,3-3:11,32,0,0:3,11:NULL:333.133:366.612,131.36:0.0,0.0:2.92855e-34,0.00311361,0.996897	0/0:73:0.999993:3,3:3-3,3-3:19,47,0,7:3,19:2,7:542.298:326.675,113.385:0.0,0.0:0.0,1.27627e-05,0.999987
-chr1	3086953	.	AACAACAACAACAAC	AACAACAACAACAACAAC	.	.	END=3086967;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999987:6,6:6-6,6-6:19,24,0,4:6,19:3,1|4,3:327.885:366.612,131.36:0.0,0.0:0.0,1.24015e-05,0.999987	0/0:74:1.0:5,5:5-5,5-5:37,31,0,6:5,37:3,1|4,5:470.789:326.675,113.385:0.0,0.0:0.0,3.12612e-11,1.0
-chr1	3087313	.	GGTTGGTTGGTT	.	.	.	END=3087324;RU=ggtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.267226:3,3:1-3,1-3:2,31,0,0:3,2:NULL:290.32:366.612,131.36:0.697862,0.697862:2.84597e-06,0.590135,0.40994	0/0:44:0.999862:3,3:3-3,3-3:16,28,0,0:3,16:NULL:319.124:326.675,113.385:0.0,0.0:0.0,0.000130932,0.999872
-chr1	3091604	.	GGGTGGGTGGGT	.	.	.	END=3091615;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.930378:3,3:3-3,3-3:7,6,0,0:3,7:NULL:80.4305:366.612,131.36:0.0,0.0:5.49869e-21,0.0321949,0.967864	0/0:50:0.999847:3,3:3-3,3-3:16,34,0,0:3,16:NULL:360.367:326.675,113.385:0.0,0.0:0.0,0.000119209,0.999881
-chr1	3095754	.	TCTCTCTCTCTC	.	.	.	END=3095765;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:6,6:6-6,6-6:25,18,0,0:6,25:NULL:259.181:366.612,131.36:0.0,0.0:0.0,1.55939e-07,1.0	0/0:51:1.0:6,6:6-6,6-6:27,20,0,3:6,27:5,2|6,1:315.128:326.675,113.385:0.139319,0.139319:0.0,2.1589e-08,1.0
-chr1	3095926	.	AAAATAAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAAT	.	.	END=3095945;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.0:5,5:5-5,5-5:28,14,0,3:5,28:2,1|3,1|4,1:267.093:366.612,131.36:0.0,0.0:0.0,1.22478e-08,1.0	0/0:48:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:252.882:326.675,113.385:0.0,0.0:0.0,8.81486e-10,1.0
-chr1	3095965	.	CAAACAAACAAA	.	.	.	END=3095976;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.845777:3,3:3-3,3-3:5,17,0,2:3,5:2,2:186.828:366.612,131.36:0.0,0.0:6.79616e-16,0.074876,0.92522	0/0:55:1.0:3,3:3-3,3-3:33,20,0,2:3,33:2,2:321.64:326.675,113.385:0.0,0.0:0.0,4.6792e-10,1.0
-chr1	3097482	.	TTGTTGTTGTTGTTG	.	.	.	END=3097496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:5,5:5-5,5-5:20,11,0,0:5,20:NULL:182.636:366.612,131.36:0.0,0.0:0.0,6.53813e-06,0.999994	0/0:51:1.0:5,5:5-5,5-5:33,16,0,2:5,33:3,1|4,1:299.39:326.675,113.385:0.0,0.0:0.0,6.26055e-10,1.0
-chr1	3099936	.	GGGTGGGTGGGT	.	.	.	END=3099947;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995606:3,3:3-3,3-3:11,19,0,0:3,11:NULL:210.358:366.612,131.36:0.0,0.0:1.47805e-34,0.00247729,0.997527	0/0:56:0.994187:3,3:3-3,3-3:10,42,0,4:3,10:2,4:444.101:326.675,113.385:0.0,0.0:2.9741e-31,0.00299531,0.997012
-chr1	3105146	.	GGAAGGAAGGAA	GGAAGGAA	.	.	END=3105157;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.101965:2,2:2-3,2-3:0,15,0,2:NULL:2,2:149.768:366.612,131.36:0.390807,0.390807:0.150094,0.489507,0.360547	0/0:45:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:265.389:326.675,113.385:0.139319,0.139319:0.0,7.22832e-08,1.0
-chr1	3116455	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3116512;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.138491:22,22:19-22,19-22:2,7,0,0:22,2:NULL:72.0894:366.612,131.36:1.39572,1.39572:1.0,0.0,0.0	0/0:8:0.0319735:29,29:26-29,26-29:0,5,0,2:NULL:14,1|27,1:63.3289:326.675,113.385:0.775065,0.775065:0.170548,0.491322,0.338258
-chr1	3120976	.	TTGTTGTTGTTG	.	.	.	END=3120987;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:21,21,0,0:4,21:NULL:271.316:366.612,131.36:0.0,0.0:0.0,4.39296e-06,0.999995	0/0:70:1.0:4,4:4-4,4-4:45,22,0,3:4,45:3,3:402.864:326.675,113.385:0.0,0.0:0.0,1.57143e-13,1.0
-chr1	3122158	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3122191;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.385809:19,19:19-20,19-20:4,29,0,3:19,4:7,1|9,1|17,1:298.939:366.612,131.36:0.696174,0.696174:5.99569e-16,0.144868,0.855214	0/0:106:0.999857:17,17:9-17,9-17:48,40,0,17:9,3|16,4|17,39|18,2:5,1|8,1|9,3|10,1|12,2|13,1|14,1|15,6|16,1:767.221:326.675,113.385:3.24656,3.24656:0.0,0.000144555,0.999857
-chr1	3122249	.	CAGACAGACAGA	.	.	.	END=3122260;RU=caga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:37,9,0,0:3,37:NULL:227.276:366.612,131.36:0.0,0.0:0.0,3.83981e-11,1.0	0/0:90:1.0:3,3:3-3,3-3:58,29,0,3:3,58:2,3:515.856:326.675,113.385:0.0,0.0:0.0,7.92967e-18,1.0
-chr1	3125367	.	AACAAACAAACAAACA	AACA	.	.	END=3125382;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0664576:1,1:1-1,1-1:0,15,0,0:NULL:NULL:131.572:366.612,131.36:0.0,0.0:0.296148,0.540177,0.1637	0/0:53:1.0:4,4:4-4,4-4:28,20,0,5:4,28:3,5:327.977:326.675,113.385:0.0,0.0:0.0,1.31461e-08,1.0
-chr1	3125745	.	TTATTATTATTATTA	TTATTATTATTATTATTATTA	.	.	END=3125759;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0303655:7,7:7-10,7-10:0,5,0,0:NULL:NULL:44.1227:366.612,131.36:1.34223,1.34223:0.0,0.0,1.0	0/0:57:1.0:5,5:4-5,4-5:34,16,0,7:4,2|5,32:3,1|4,6:348.986:326.675,113.385:0.169767,0.169767:0.0,1.65507e-06,1.0
-chr1	3130290	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3130337;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:37:0.382746:24,42:24-25,23-42:15,17,0,5:23,4|24,8|25,3:14,1|17,1|19,1|21,1|40,1:291.567:366.612,131.36:0.358902,8.71943:5.58835e-11,0.00100609,0.998998	0/1:74:0.28766:24,33:24-24,23-33:21,19,0,34:22,2|23,5|24,11|25,3:4,1|7,5|9,2|10,3|12,2|13,3|14,1|15,5|16,3|17,2|18,2|20,2|25,1|26,1|31,1:576.311:326.675,113.385:0.0990099,3.5386:1.17544e-25,2.47281e-10,1.0
-chr1	3131093	.	TGACTGACTGAC	.	.	.	END=3131104;RU=tgac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:21,24,0,0:3,21:NULL:299.824:366.612,131.36:0.0,0.0:0.0,4.24596e-06,0.999995	0/0:69:1.0:3,3:3-3,3-3:46,23,0,0:3,46:NULL:387.79:326.675,113.385:0.0,0.0:0.0,1.31898e-13,1.0
-chr1	3132979	.	CTCCCTCCCTCC	.	.	.	END=3132990;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:21,16,0,0:3,21:NULL:232.377:366.612,131.36:0.0,0.0:0.0,4.51274e-06,0.999995	0/0:43:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:246.583:326.675,113.385:0.0,0.0:0.0,6.02507e-09,1.0
-chr1	3134119	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3134160;RU=ttg;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.978038:14,14:13-14,13-14:9,18,0,11:14,9:3,1|4,1|6,2|7,1|8,1|10,1|12,2|13,2:291.17:366.612,131.36:0.390807,0.390807:1.78453e-18,0.0105156,0.989507	0/0:78:1.0:14,14:14-14,14-14:33,20,0,23:14,33:4,1|5,1|6,1|7,5|8,2|9,5|10,1|11,1|12,5|13,1:503.566:326.675,113.385:0.0,0.0:0.0,6.14385e-10,1.0
-chr1	3153384	.	AATAAATAAATA	.	.	.	END=3153395;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:172.88:366.612,131.36:0.0,0.0:0.0,1.09816e-08,1.0	0/0:25:0.99958:3,3:3-3,3-3:14,8,0,3:3,14:2,3:150.528:326.675,113.385:0.0,0.0:1.58e-43,0.000173232,0.999827
-chr1	3161509	.	GGGTGGGTGGGT	.	.	.	END=3161520;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.994566:3,3:3-3,3-3:11,11,0,0:3,11:NULL:145.407:366.612,131.36:0.0,0.0:7.00828e-33,0.00300606,0.997003	0/0:36:0.458435:3,3:2-3,2-3:3,30,0,3:3,3:2,3:309.733:326.675,113.385:0.429525,0.429525:5.10445e-09,0.356641,0.643398
-chr1	3162873	.	TGCTGCTGCTGC	TGCTGCTGCTGCTGCTGC	.	.	END=3162884;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.999286:6,6:6-6,6-6:14,6,0,0:6,14:NULL:113.711:366.612,131.36:0.0,0.0:0.0,0.000160033,0.999842	0/0:43:1.0:4,4:4-4,4-4:30,13,0,0:4,30:NULL:235.308:326.675,113.385:0.0,0.0:0.0,7.52117e-09,1.0
-chr1	3163213	.	ATTCTATTCTATTCT	.	.	.	END=3163227;RU=attct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999547:3,3:3-3,3-3:14,11,0,0:3,14:NULL:153.89:366.612,131.36:0.0,0.0:3e-45,0.000269175,0.999735	0/0:20:0.999735:3,3:3-3,3-3:15,5,0,0:3,15:NULL:107.258:326.675,113.385:0.0,0.0:0.0,0.000138567,0.999864
-chr1	3164426	.	TCTTCCTCTTCCTCTTCC	.	.	.	END=3164443;RU=tcttcc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:247.76:366.612,131.36:0.0,0.0:0.0,8.32048e-07,1.0	0/0:38:0.999874:3,3:3-3,3-3:15,20,0,3:3,15:2,3:272.773:326.675,113.385:0.0,0.0:0.0,0.000119291,0.999881
-chr1	3164472	.	TCATCATCATCATCA	.	.	.	END=3164486;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:31,13,0,0:5,31:NULL:245.878:366.612,131.36:0.0,0.0:0.0,5.79757e-09,1.0	0/0:29:0.999994:5,5:5-5,5-5:19,10,0,0:5,19:NULL:171.622:326.675,113.385:0.0,0.0:0.0,1.43699e-05,0.999986
-chr1	3166251	.	AAACAAACAAAC	.	.	.	END=3166262;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:232.352:366.612,131.36:0.0,0.0:0.0,4.06024e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:185.606:326.675,113.385:0.0,0.0:0.0,1.43407e-06,1.0
-chr1	3169195	.	GTAGTAGTAGTA	.	.	.	END=3169206;RU=gta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:23,12,0,2:4,23:3,2:215.508:366.612,131.36:0.0,0.0:0.0,3.28087e-07,1.0	0/0:28:1.00001:4,4:4-4,4-4:23,5,0,0:4,23:NULL:131.731:326.675,113.385:0.0,0.0:0.0,8.37304e-07,1.0
-chr1	3169225	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=3169258;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.98882:13,13:13-14,13-14:11,15,0,16:13,11:5,1|6,3|7,1|8,2|9,3|10,1|11,1|12,4:311.885:366.612,131.36:0.341835,0.341835:0.998596,0.00140777,2.52175e-40	0/0:29:0.998848:17,17:10-17,10-17:14,6,0,8:17,14:5,1|7,1|8,1|13,2|14,1|16,2:177.981:326.675,113.385:3.49571,3.49571:7.17539e-19,0.000371304,0.999629
-chr1	3169275	.	AATAAATAAATA	.	.	.	END=3169286;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.98337:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.015:366.612,131.36:0.0,0.0:2.11896e-29,0.0105485,0.989476	0/0:22:0.996749:3,3:3-3,3-3:11,8,0,3:3,11:2,3:136.283:326.675,113.385:0.0,0.0:5.49383e-36,0.00126031,0.998746
-chr1	3170541	.	ACAAAACAAAACAAAACAAA	.	.	.	END=3170560;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:23,21,0,2:4,23:2,1|3,1:294.167:366.612,131.36:0.0,0.0:0.0,7.87942e-07,1.0	0/0:49:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:303.202:326.675,113.385:0.0,0.0:0.0,1.04162e-07,1.0
-chr1	3180457	.	GGGTGGGTGGGT	.	.	.	END=3180468;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.927026:3,3:3-3,3-3:7,20,0,0:3,7:NULL:201.976:366.612,131.36:0.0,0.0:2.07325e-21,0.0459557,0.95412	0/0:39:0.998747:3,3:3-3,3-3:13,26,0,0:3,13:NULL:272.37:326.675,113.385:0.0,0.0:5.06635e-39,0.000898473,0.999104
-chr1	3184125	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3184152;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.972076:19,19:19-20,19-20:9,9,0,13:19,9:5,1|6,2|7,2|9,1|11,1|12,1|13,2|15,1|17,2:230.576:366.612,131.36:0.398507,0.398507:0.0,0.0,1.0	0/0:39:0.714594:14,14:13-14,13-14:18,5,0,15:13,5|14,13:5,1|6,2|7,5|8,2|11,3|13,2:253.613:326.675,113.385:0.458235,0.458235:1.65788e-13,0.285296,0.714708
-chr1	3184524	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=3184541;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999765:6,6:6-6,6-6:15,19,0,3:6,15:5,3:255.504:366.612,131.36:0.0,0.0:0.0,0.000105367,0.999895	0/0:43:1.0:6,6:6-6,6-6:23,14,0,5:6,23:3,1|5,4:254.377:326.675,113.385:0.139319,0.139319:0.0,3.86922e-07,1.0
-chr1	3185654	.	AGAGAGAGAGAG	.	.	.	END=3185665;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999571:6,6:6-6,6-6:14,16,0,0:6,14:NULL:206.063:366.612,131.36:0.0,0.0:5.27875e-34,0.000291058,0.999712	0/0:35:1.00001:6,6:6-6,6-6:21,14,0,0:6,21:NULL:210.56:326.675,113.385:0.0,0.0:0.0,2.89898e-06,1.0
-chr1	3188551	.	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	GCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTTGCTTTTT	.	.	END=3188606;RU=gcttttt;PERIOD=7;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.98448:7,7:7-7,7-7:9,9,0,4:7,9:5,2|6,1|7,1:146.862:366.612,131.36:0.0,0.0:0.990598,0.00942173,4.03629e-19	0/0:39:0.932444:8,8:8-8,8-8:6,15,0,18:8,6:3,6|4,4|5,2|6,2|7,2|8,2:285.442:326.675,113.385:0.0,0.0:8.04339e-25,0.0264434,0.973607
-chr1	3189480	.	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	END=3189527;RU=tta;PERIOD=3;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.627346:17,17:17-20,17-20:5,14,0,9:17,5:5,1|9,2|10,2|11,3|15,1:227.535:366.612,131.36:1.36051,1.36051:3.08894e-09,0.0980891,0.902012	0/0:32:0.980651:16,16:15-16,15-16:9,11,0,11:16,9:4,1|5,2|8,1|9,1|10,1|12,1|13,1|14,1|15,2:228.914:326.675,113.385:0.36513,0.36513:4.46609e-12,0.00943155,0.990589
-chr1	3190239	.	TTTGTTTGTTTGTTTG	.	.	.	END=3190254;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:21,12,0,5:4,21:3,5:231.473:366.612,131.36:0.0,0.0:0.0,9.58837e-07,1.0	0/0:32:1.0:4,4:4-4,4-4:19,10,0,3:4,19:3,3:194.354:326.675,113.385:0.0,0.0:0.0,4.98852e-06,0.999995
-chr1	3192683	.	GTGTGTGTGTGTGT	.	.	.	END=3192696;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:7,7:7-8,7-8:20,8,0,5:7,20:4,1|5,1|6,3:190.257:366.612,131.36:0.195027,0.195027:3.28507e-39,2.62655e-06,1.0	0/0:31:0.999933:7,7:7-7,7-7:17,10,0,4:7,17:5,3|6,1:188.688:326.675,113.385:0.0,0.0:2.69012e-33,3.3069e-05,0.99997
-chr1	3192934	.	TATATATATATATA	.	.	.	END=3192947;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:7,7:7-7,7-7:24,8,0,0:7,24:NULL:166.924:366.612,131.36:0.0,0.0:7.6252e-41,5.24495e-07,1.0	0/0:31:1.00001:7,7:7-7,7-7:22,8,0,0:7,22:NULL:161.681:326.675,113.385:0.139319,0.139319:1.59678e-37,2.31998e-06,1.0
-chr1	3193519	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3193554;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.896001:25,26:25-26,25-26:5,6,0,5:25,3|26,2:6,1|8,1|14,1|17,1|18,1:130.22:366.612,131.36:0.363246,0.374147:0.0,0.0,1.0	0/3:54:0.357509:18,28:18-22,19-29:6,24,0,20:17,2|18,4:6,2|9,3|10,4|11,2|12,1|14,1|15,1|16,1|17,1|18,2|20,1|28,1:421.12:326.675,113.385:1.11332,3.06777:6.2436e-31,8.09123e-05,0.999919
-chr1	3194182	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194229;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.881189:25,26:25-26,26-26:9,14,0,18:25,4|26,5:6,1|7,1|8,1|10,1|14,4|15,2|16,1|17,1|18,1|19,3|23,1|24,1:322.102:366.612,131.36:0.431574,0.0:4.54279e-23,0.000752893,0.999249	0/3:44:0.309339:24,28:17-25,17-28:3,13,0,24:24,3:5,1|9,1|12,1|13,1|14,3|15,3|17,4|18,2|20,2|21,1|22,1|23,2|24,1|28,1:323.096:326.675,113.385:1.47355,2.81063:2.01499e-19,5.77486e-05,0.999942
-chr1	3194304	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3194333;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:44:0.281101:16,36:16-16,16-36:21,11,0,11:15,7|16,14:5,1|6,1|9,1|13,1|14,1|15,1|16,1|19,2|22,1|33,1:312.349:366.612,131.36:0.0,7.03249:0.0,9.98693e-29,1.0	0/3:39:0.303584:15,37:15-16,19-39:15,9,0,15:14,2|15,11|16,2:5,1|8,1|9,1|10,1|11,1|16,3|17,1|18,1|19,1|21,1|22,1|35,1|37,1:292.474:326.675,113.385:0.195027,4.9142:0.0,5.51792e-15,1.0
-chr1	3198131	.	AAAAAACAAAAAACAAAAAAC	AAAAAACAAAAAACAAAAAACAAAAAAC	.	.	END=3198151;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.379613:4,4:3-4,3-4:2,11,0,6:4,2:2,2|3,4:152.071:366.612,131.36:0.469019,0.469019:5.91913e-40,0.0394766,0.960594	0/0:21:0.999434:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.589:326.675,113.385:0.0,0.0:0.0,0.000348704,0.999652
-chr1	3207640	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3207663;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0797823:11,11:6-12,6-12:0,11,0,10:NULL:2,3|3,1|4,1|6,3|9,1|10,1:178.745:366.612,131.36:2.00988,2.00988:4.63405e-39,0.0583273,0.941757	0/0:34:0.985475:6,6:6-6,6-6:9,16,0,9:6,9:3,2|4,3|5,4:247.302:326.675,113.385:0.0,0.0:3.58493e-26,0.0070461,0.992971
-chr1	3209528	.	AAAAACAAAAACAAAAACAAAAAC	.	.	.	END=3209551;RU=aaaaac;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.916764:4,4:1-4,1-4:7,14,0,0:4,7:NULL:163.65:366.612,131.36:0.5093,0.5093:4.93839e-24,0.0720031,0.92809	0/0:35:1.00001:4,4:4-4,4-4:21,10,0,4:4,21:2,1|3,3:203.768:326.675,113.385:0.0,0.0:0.0,1.48659e-06,1.0
-chr1	3209577	.	AACAAAACAAAACAA	.	.	.	END=3209591;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999471:3,3:3-3,3-3:14,10,0,0:3,14:NULL:149.919:366.612,131.36:0.0,0.0:0.0,0.000357457,0.999644	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:195.055:326.675,113.385:0.0,0.0:0.0,3.04889e-07,1.0
-chr1	3212208	.	TATTTATTTATT	.	.	.	END=3212219;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999776:3,3:3-3,3-3:15,22,0,2:3,15:2,2:275.853:366.612,131.36:0.0,0.0:0.0,0.000127184,0.999873	0/0:27:0.999844:3,3:3-3,3-3:16,11,0,0:3,16:NULL:161.29:326.675,113.385:0.0,0.0:0.0,8.8955e-05,0.999911
-chr1	3219276	.	ATTATTATTATTATTATTATTATTATTATTATT	ATTATTATTATTATTATTATTATTATTATT	.	.	END=3219308;RU=att;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.993726:10,10:9-10,9-10:11,8,0,3:10,11:3,1|9,2:143.553:366.612,131.36:0.21692,0.21692:0.996844,0.00316656,1.55989e-15	0/0:13:0.652411:11,11:10-11,10-11:5,7,0,0:11,5:NULL:87.0853:326.675,113.385:0.486863,0.486863:2.85734e-08,0.237372,0.76265
-chr1	3224265	.	AAACAAACAAAC	.	.	.	END=3224276;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.555:366.612,131.36:0.0,0.0:0.0,3.11222e-06,1.0	0/0:31:0.999993:3,3:3-3,3-3:19,12,0,0:3,19:NULL:180.318:326.675,113.385:0.0,0.0:0.0,1.19101e-05,0.999987
-chr1	3229231	.	AACAAAACAAAACAAAACAAAACAA	AACAAAACAAAACAAAACAA	.	.	END=3229255;RU=aacaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.969771:4,4:4-4,4-4:9,9,0,0:4,9:NULL:117.579:366.612,131.36:0.0,0.0:0.990731,0.00929149,1.05996e-22	0/0:30:0.999593:5,5:5-5,5-5:14,8,0,8:5,14:2,1|3,2|4,5:184.138:326.675,113.385:0.0,0.0:1.17395e-36,0.000157612,0.999843
-chr1	3230661	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3230700;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0246166:29,29:18-29,18-29:0,9,0,6:NULL:11,1|12,1|17,1|20,1|22,1|27,1:132.661:366.612,131.36:2.88399,2.88399:3.81652e-23,0.111212,0.888885	1/0:40:0.977378:19,20:17-21,19-21:8,15,0,15:19,4|20,4:4,1|6,1|7,3|8,1|9,1|11,1|12,1|13,1|14,2|16,1|17,1|18,1:301.046:326.675,113.385:0.922547,0.601276:0.000508468,0.979059,0.0204738
-chr1	3247218	.	AAAACAAAACAAAAC	.	.	.	END=3247232;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999292:3,3:3-3,3-3:13,15,0,3:3,13:2,3:213.981:366.612,131.36:0.0,0.0:4.881e-42,0.000339974,0.99966	0/0:24:0.99952:3,3:3-3,3-3:14,8,0,2:3,14:2,2:141.793:326.675,113.385:0.0,0.0:6e-45,0.000223836,0.99978
-chr1	3248425	.	TTGCTTGCTTGCTTGC	.	.	.	END=3248440;RU=ttgc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:32,16,0,2:4,32:2,1|3,1:292.716:366.612,131.36:0.0,0.0:0.0,9.84893e-10,1.0	0/0:42:1.0:4,4:4-4,4-4:28,14,0,0:4,28:NULL:236.422:326.675,113.385:0.0,0.0:0.0,3.28777e-08,1.0
-chr1	3250571	.	ACCACCACCACCACC	ACCACCACCACC	.	.	END=3250585;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.0:4,4:4-4,4-4:21,18,0,0:4,21:NULL:250.656:366.612,131.36:0.0,0.0:1.0,2.14843e-06,0.0	0/0:40:1.0:5,5:4-5,4-5:27,12,0,0:5,27:NULL:215.956:326.675,113.385:0.169767,0.169767:0.0,8.70194e-08,1.0
-chr1	3256241	.	AAACAAACAAAC	.	.	.	END=3256252;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.187:366.612,131.36:0.0,0.0:0.0,1.7126e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:200.029:326.675,113.385:0.0,0.0:0.0,5.2323e-09,1.0
-chr1	3257455	.	GAAGAAGAAGAAGAA	.	.	.	END=3257469;RU=gaa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:23,11,0,3:5,23:4,3:216.8:366.612,131.36:0.0,0.0:0.0,4.39512e-07,1.0	0/0:38:1.0:5,5:5-5,5-5:30,8,0,0:5,30:NULL:194.078:326.675,113.385:0.0,0.0:0.0,1.01573e-08,1.0
-chr1	3263762	.	ACCCACCCACCC	.	.	.	END=3263773;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999996:3,3:3-3,3-3:20,15,0,0:3,20:NULL:218.28:366.612,131.36:0.0,0.0:0.0,1.16154e-05,0.999987	0/0:23:0.99999:3,3:3-3,3-3:18,5,0,0:3,18:NULL:118.308:326.675,113.385:0.0,0.0:0.0,1.72567e-05,0.999986
-chr1	3266661	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3266706;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.859583:16,17:16-18,15-18:6,10,0,5:16,4|17,2:6,1|14,2|15,2:158.259:366.612,131.36:0.702063,0.743564:1.0,0.0,0.0	0/0:42:0.969164:23,23:13-23,13-23:16,11,0,12:22,3|23,13:6,1|12,1|14,2|15,1|16,1|17,1|19,1|20,1|22,3:271.086:326.675,113.385:4.42132,4.42132:2.23068e-12,0.0300615,0.969994
-chr1	3266707	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3266746;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:33:0.271464:20,23:20-23,21-26:3,14,0,15:20,3:6,3|7,3|8,1|10,1|11,1|13,1|15,2|21,2|23,1:261.687:366.612,131.36:0.726627,1.33784:4.26235e-26,2.79685e-05,0.999972	0/1:38:0.307853:20,21:20-20,15-22:11,11,0,13:20,11:5,1|7,1|10,1|14,1|16,1|17,1|18,1|19,5|21,1:255.799:326.675,113.385:0.0,1.50169:6.83388e-24,2.67566e-08,1.0
-chr1	3283714	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=3283733;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998014:5,5:5-5,5-5:13,20,0,3:5,13:2,1|3,2:255.744:366.612,131.36:0.0,0.0:1.99649e-38,0.00152728,0.99848	0/0:36:1.0:5,5:4-5,4-5:19,10,0,6:5,19:2,1|3,1|4,4:218.899:326.675,113.385:0.311527,0.311527:0.0,8.6473e-06,0.999994
-chr1	3284144	.	AACCAACCAACC	.	.	.	END=3284155;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:276.757:366.612,131.36:0.0,0.0:0.0,3.40343e-08,1.0	0/0:22:0.999893:3,3:3-4,3-4:16,5,0,0:3,16:NULL:107.814:326.675,113.385:0.425627,0.425627:0.0,5.48176e-05,0.999948
-chr1	3284442	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3284483;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:47:0.804412:22,23:21-22,21-25:14,13,0,17:21,6|22,8:5,1|6,2|7,1|8,1|9,1|10,1|11,1|12,1|15,1|17,2|18,1|21,2|22,1|23,1:336.16:366.612,131.36:0.484441,1.48323:2.936e-42,1.0899e-08,1.0	0/3:42:0.302197:21,33:21-21,21-33:18,9,0,12:21,18:5,1|13,1|14,1|15,1|17,1|18,1|19,3|20,2|33,1:272.176:326.675,113.385:0.0,6.07264:2.65257e-24,2.95194e-07,1.0
-chr1	3284513	.	TGAATGAATGAATGAATGAATGAA	TGAATGAATGAATGAATGAATGAATGAA	.	.	END=3284536;RU=tgaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:0.999928:6,7:6-7,7-7:29,8,0,0:6,7|7,22:NULL:208.743:366.612,131.36:0.382696,0.0:0.0,2.17331e-12,1.0	0/0:41:1.0:6,6:6-6,6-6:26,10,0,5:6,26:2,1|3,2|5,2:234.8:326.675,113.385:0.0,0.0:0.0,7.37534e-08,1.0
-chr1	3286188	.	CATCATCATCAT	.	.	.	END=3286199;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:28,16,0,3:4,28:3,3:276.88:366.612,131.36:0.0,0.0:0.0,1.38019e-08,1.0	0/0:28:0.999774:4,4:4-4,4-4:15,11,0,2:4,15:3,2:169.069:326.675,113.385:0.0,0.0:0.0,0.000113157,0.999888
-chr1	3287342	.	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC,TCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCC	.	.	END=3287441;RU=tctcc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0428838:8,8:1-8,1-8:0,3,0,3:NULL:7,1|8,2:47.3284:366.612,131.36:1.99367,1.99367:1.0,0.0,0.0	2/2:17:0.0230831:12,12:5-15,5-15:0,6,0,9:NULL:5,2|7,1|9,3|10,1|11,1|12,1:120.258:326.675,113.385:4.65146,4.65146:1.0,0.0,0.0
-chr1	3287445	.	TCCCCCTCCCCCTCCCCCTCCCCC	TCCCCCTCCCCCTCCCCCTCCCCCTCCCCC	.	.	END=3287468;RU=tccccc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.557197:5,5:5-5,5-5:4,2,0,0:5,4:NULL:34.0361:366.612,131.36:0.29703,0.29703:5.92393e-13,0.157841,0.842234	0/0:16:0.937132:4,4:4-4,4-4:8,8,0,0:4,8:NULL:109.373:326.675,113.385:0.29703,0.29703:6.49485e-17,0.047431,0.952645
-chr1	3287528	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=3287583;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:10:0.0290867:7,15:3-14,6-15:0,6,0,2:NULL:4,1|14,1:69.6104:366.612,131.36:3.94079,3.01377:6.41645e-08,0.806418,0.193633	0/0:24:0.869864:14,14:14-15,14-15:6,7,0,10:14,6:2,1|8,3|9,2|10,1|13,3:162.679:326.675,113.385:0.45695,0.45695:3.90143e-11,0.0418628,0.958209
-chr1	3298789	.	AAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	END=3298808;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999963:7,7:7-7,7-7:18,11,0,2:7,18:4,1|5,1:193.51:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:47:1.0:4,4:4-4,4-4:26,18,0,3:4,26:3,3:286.097:326.675,113.385:0.0,0.0:0.0,6.66746e-08,1.0
-chr1	3308941	.	AAAATAAAATAAAATAAAATAAAATAAAAT	AAAAT	.	.	END=3308970;RU=aaaat;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:14:0.959181:6,6:6-6,6-6:8,6,0,0:6,8:NULL:84.4534:326.675,113.385:0.0,0.0:8.40327e-25,0.0235629,0.976482
-chr1	3309296	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCT,TTCTTTCT	.	.	END=3309339;RU=ttct;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:11:0.0507287:1,2:1-2,1-2:0,11,0,0:NULL:NULL:95.391:366.612,131.36:0.499387,0.494455:0.718816,0.268655,0.0125524	0/0:18:0.950048:11,11:11-11,11-11:8,7,0,3:11,8:4,1|7,1|8,1:122.558:326.675,113.385:0.0,0.0:2.46773e-21,0.030773,0.969285
-chr1	3311045	.	AAGAAAAAGAAAAAGAAA	.	.	.	END=3311062;RU=aagaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.983812:3,3:3-3,3-3:9,16,0,0:3,9:NULL:183.474:366.612,131.36:0.0,0.0:2.32816e-26,0.0130668,0.986963	0/0:33:1.00001:3,3:3-3,3-3:22,9,0,2:3,22:2,2:180.68:326.675,113.385:0.0,0.0:0.0,1.03504e-06,1.0
-chr1	3317551	.	TAAATAAATAAA	.	.	.	END=3317562;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.60986:3,3:3-3,3-3:4,7,0,0:3,4:NULL:78.8406:366.612,131.36:0.0,0.0:5.51413e-12,0.183566,0.816501	0/0:8:0.469645:3,3:1-3,1-3:3,5,0,0:3,3:NULL:57.5009:326.675,113.385:0.339533,0.339533:2.24631e-09,0.263676,0.736329
-chr1	3317572	.	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	TA,TATATA	.	.	END=3317629;RU=ta;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.00216521:1,1:1-26,1-26:0,10,0,0:NULL:NULL:89.3505:366.612,131.36:6.01366,6.01366:0.64016,0.333863,0.0260525	2/2:2:0.00090688:3,3:1-3,1-3:0,2,0,0:NULL:NULL:19.0558:326.675,113.385:0.851255,0.851255:0.262426,0.580756,0.156859
-chr1	3317629	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3317664;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0145036:17,17:8-20,8-20:0,7,0,3:NULL:8,1|10,1|17,1:89.8084:366.612,131.36:4.75419,4.75419:0.228232,0.664371,0.107496	0/0:2:0.0227178:18,18:18-18,18-18:0,1,0,0:NULL:NULL:9.12935:326.675,113.385:0.0,0.0:0.187493,0.491102,0.321513
-chr1	3318469	.	TTTTGTTTTGTTTTG	.	.	.	END=3318483;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:2-3,2-3:23,21,0,0:3,23:NULL:290.045:366.612,131.36:0.253975,0.253975:0.0,9.8791e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:233.804:326.675,113.385:0.0,0.0:0.0,1.73051e-07,1.0
-chr1	3319830	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=3319850;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999884:7,7:7-7,7-7:17,8,0,0:7,17:NULL:143.581:366.612,131.36:0.0,0.0:6e-45,7.1866e-05,0.999932	0/0:29:0.999541:7,7:7-7,7-7:14,11,0,4:7,14:4,1|5,1|6,2:186.226:326.675,113.385:0.0,0.0:2.56804e-37,0.000211661,0.999789
-chr1	3325716	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3325743;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:15:0.0305249:12,13:1-15,1-15:0,12,0,3:NULL:4,1|7,1|12,1:134.041:366.612,131.36:4.67388,4.71352:0.51569,0.449359,0.0350738	0/0:15:0.659866:14,14:14-14,14-14:5,10,0,0:14,5:NULL:112.97:326.675,113.385:0.29703,0.29703:2.65894e-06,0.2113,0.78875
-chr1	3327145	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3327194;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.453927:21,21:21-22,21-22:3,11,0,10:21,3:4,2|8,1|12,1|13,1|17,1|18,2|20,2:196.883:366.612,131.36:0.294378,0.294378:1.0,0.0,0.0	0/2:36:0.289986:25,28:24-25,23-28:10,8,0,17:23,2|25,8:5,2|7,1|8,1|10,1|12,1|13,1|14,3|15,1|16,1|17,1|21,1|23,1|24,1|28,1:268.127:326.675,113.385:0.240494,2.03792:2.52992e-12,1.94684e-05,0.99998
-chr1	3327251	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=3327290;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.950032:14,14:13-14,13-14:8,11,0,12:14,8:7,3|8,2|9,2|10,2|11,1|12,1|13,1:223.195:366.612,131.36:0.44763,0.44763:0.0,0.0,1.0	0/0:34:1.0:10,10:10-11,10-11:19,6,0,7:10,19:2,1|5,1|9,5:185.78:326.675,113.385:0.270063,0.270063:7.3456e-41,6.86667e-06,0.999994
-chr1	3339592	.	GAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=3339611;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0383828:8,8:8-10,8-10:0,8,0,0:NULL:NULL:75.7368:366.612,131.36:0.957892,0.957892:0.256004,0.503285,0.24073	0/0:23:0.991072:10,10:10-11,10-11:11,8,0,2:10,11:5,1|7,1:134.709:326.675,113.385:0.442343,0.442343:7.4509e-22,0.00419897,0.99581
-chr1	3339980	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=3340011;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999475:9,9:9-9,9-9:14,12,0,11:9,14:3,3|4,1|5,1|6,1|7,1|8,4:249.953:366.612,131.36:0.0,0.0:0.0,2.18235e-05,0.999979	0/0:27:0.999453:8,8:8-8,8-8:14,9,0,4:8,14:5,1|6,1|7,2:163.819:326.675,113.385:0.0,0.0:1.3722e-41,0.000249176,0.999751
-chr1	3340203	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=3340226;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.995765:5,5:5-5,5-5:12,15,0,0:5,12:NULL:185.688:366.612,131.36:0.0,0.0:0.998877,0.00112576,2.65565e-31	0/0:24:0.992594:6,6:6-6,6-6:10,10,0,4:6,10:3,2|5,2:158.865:326.675,113.385:0.0,0.0:2.79459e-24,0.00326886,0.996739
-chr1	3342039	.	CATGCATGCATG	.	.	.	END=3342050;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.75824:3,3:3-3,3-3:5,6,0,0:3,5:NULL:72.7852:366.612,131.36:0.0,0.0:3.67506e-17,0.125749,0.874349	0/0:11:0.955581:3,3:3-3,3-3:8,3,0,0:3,8:NULL:61.7549:326.675,113.385:0.0,0.0:8.05459e-27,0.0209154,0.979125
-chr1	3342663	.	ATAAATAAATAA	.	.	.	END=3342674;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.015:366.612,131.36:0.0,0.0:7.638e-42,1.64445e-06,1.0	0/0:25:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:133.089:326.675,113.385:0.0,0.0:2.13385e-34,2.63915e-05,0.999978
-chr1	3355412	.	ATGTATGTATGT	.	.	.	END=3355423;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:332.388:366.612,131.36:0.0,0.0:0.0,1.13867e-08,1.0	0/0:46:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:278.085:326.675,113.385:0.0,0.0:0.0,6.5236e-08,1.0
-chr1	3357227	.	TTATTTATTTAT	.	.	.	END=3357238;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,13,0,3:3,30:2,3:259.516:366.612,131.36:0.0,0.0:0.0,2.25091e-09,1.0	0/0:29:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.327:326.675,113.385:0.0,0.0:0.0,6.20079e-07,1.0
-chr1	3360114	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3360159;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.156806:26,26:22-26,22-26:2,11,0,9:26,2:4,1|5,1|7,1|11,1|12,1|15,1|18,2|19,1:183.118:366.612,131.36:1.29813,1.29813:1.00743e-06,0.171728,0.828341	0/0:37:0.636893:23,23:21-24,21-24:5,12,0,17:23,5:4,1|7,1|8,1|9,1|10,1|11,1|12,2|14,3|15,1|16,2|19,1|20,1|21,1:271.022:326.675,113.385:0.905494,0.905494:7.81328e-06,0.17981,0.820249
-chr1	3361293	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3361348;RU=ct;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.988165:17,18:15-17,15-18:8,21,0,3:17,5|18,3:5,1|6,1|11,1:254.984:366.612,131.36:0.447192,0.872412:1.0,0.0,0.0	0/0:34:0.931998:28,28:27-29,27-29:8,11,0,13:28,8:5,1|12,2|15,1|16,1|18,1|19,1|21,1|24,3|25,1|27,1:244.907:326.675,113.385:0.48807,0.48807:4.27324e-11,0.032789,0.967271
-chr1	3361348	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3361393;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.332648:30,35:23-30,23-36:4,20,0,16:30,4:7,1|11,1|12,1|14,1|17,1|18,1|19,1|20,3|22,1|24,1|25,1|28,1|31,1|35,1:338.187:366.612,131.36:2.4871,3.85048:0.0,1.165e-10,1.0	0/0:40:0.979008:23,23:20-23,20-23:9,15,0,14:23,9:5,1|6,1|7,1|9,1|10,1|11,1|12,1|13,2|14,2|18,1|22,2:290.388:326.675,113.385:1.18481,1.18481:2.84686e-16,0.0140861,0.985942
-chr1	3365708	.	TTTCTTTCTTTC	TTTC	.	.	END=3365719;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.31096:1,3:1-1,1-6:11,17,0,3:1,11:2,1|3,2:222.859:366.612,131.36:0.0,0.849641:6.25475e-16,1.0,1.7818e-41	0/0:24:0.999884:3,3:3-3,3-3:16,5,0,3:3,16:2,3:132.662:326.675,113.385:0.0,0.0:1.3774e-39,4.05224e-05,0.999963
-chr1	3365944	.	TGTGTGTGTGTG	.	.	.	END=3365955;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999788:6,6:6-6,6-6:15,12,0,4:6,15:5,4:193.16:366.612,131.36:0.0,0.0:5.2e-44,8.18518e-05,0.999918	0/0:35:1.00001:6,6:6-6,6-6:20,13,0,2:6,20:5,2:212.768:326.675,113.385:0.0,0.0:0.0,3.18577e-06,1.0
-chr1	3386948	.	TCTTTCTTTCTT	.	.	.	END=3386959;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.997909:3,3:3-3,3-3:12,17,0,0:3,12:NULL:198.545:366.612,131.36:0.0,0.0:4.33761e-40,0.00135655,0.998648	0/0:28:0.999936:3,3:3-3,3-3:17,11,0,0:3,17:NULL:170.847:326.675,113.385:0.0,0.0:0.0,4.5359e-05,0.999956
-chr1	3388595	.	ACTTCACTTCACTTC	.	.	.	END=3388609;RU=acttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.848:366.612,131.36:0.0,0.0:0.0,1.35613e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:232.247:326.675,113.385:0.0,0.0:0.0,1.93775e-06,1.0
-chr1	3390191	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTC	.	.	END=3390216;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:0.999474:5,13:3-13,13-13:23,9,0,0:3,2|5,3|13,18:NULL:203.98:366.612,131.36:1.7577,0.0:1.83634e-33,1.0,1.91746e-09	0/0:46:0.999873:13,13:12-13,12-13:30,8,0,7:12,4|13,26:5,1|7,1|10,1|11,3|12,1:265.253:326.675,113.385:0.236383,0.236383:7.1e-44,0.00012746,0.999873
-chr1	3393075	.	ACACACACACACAC	.	.	.	END=3393088;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:24,15,0,8:7,24:5,4|6,4:291.55:366.612,131.36:0.0,0.0:0.0,2.26844e-07,1.0	0/0:47:1.0:7,7:7-7,7-7:25,19,0,2:7,25:6,2:296.677:326.675,113.385:0.0990099,0.0990099:0.0,3.55528e-07,1.0
-chr1	3395163	.	AAGAAAGAAAGA	.	.	.	END=3395174;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.847:366.612,131.36:0.0,0.0:0.0,9.82503e-06,0.999993	0/0:35:1.0:3,3:3-3,3-3:18,14,0,3:3,18:2,3:217.461:326.675,113.385:0.0,0.0:0.0,9.75855e-06,0.999993
-chr1	3403481	.	TATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATA	.	.	END=3403498;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.165483:20,20:16-20,16-20:2,9,0,0:20,2:NULL:99.2001:366.612,131.36:1.26066,1.26066:0.0,0.0,1.0	0/0:21:0.956424:9,9:8-9,8-9:9,11,0,0:9,9:NULL:138.289:326.675,113.385:0.21692,0.21692:5.35994e-12,0.0302066,0.969851
-chr1	3403725	.	ACCACCACCACC	.	.	.	END=3403736;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:27,18,0,0:4,27:NULL:262.147:366.612,131.36:0.0,0.0:0.0,9.58616e-08,1.0	0/0:48:1.0:4,4:4-4,4-4:33,15,0,0:4,33:NULL:271.867:326.675,113.385:0.0,0.0:0.0,1.89479e-09,1.0
-chr1	3405593	.	TATTTATTTATT	.	.	.	END=3405604;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:22,15,0,2:3,22:2,2:234.717:366.612,131.36:0.0,0.0:0.0,6.5924e-07,1.0	0/0:23:0.999792:3,3:3-3,3-3:15,6,0,2:3,15:2,2:129.67:326.675,113.385:0.0,0.0:0.0,8.11512e-05,0.999919
-chr1	3405717	.	AACAACAACAAC	.	.	.	END=3405728;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:23,24,0,2:4,23:3,2:320.549:366.612,131.36:0.0,0.0:0.0,4.37449e-07,1.0	0/0:32:0.999896:4,4:4-4,4-4:16,12,0,4:4,16:3,4:203.848:326.675,113.385:0.0,0.0:0.0,5.05573e-05,0.999949
-chr1	3407095	.	AAAATAAAATAAAAT	.	.	.	END=3407109;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:140.173:366.612,131.36:0.0,0.0:0.0,7.06878e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:27,14,0,2:3,27:2,2:251.859:326.675,113.385:0.0,0.0:0.0,3.11129e-08,1.0
-chr1	3408522	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	END=3408561;RU=gaaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.65855:14,14:12-14,12-14:5,16,0,8:14,5:5,2|6,1|7,1|8,1|12,2|13,1:242.678:366.612,131.36:0.581383,0.581383:0.0,0.0,1.0	0/0:41:0.824507:10,10:9-10,9-10:14,19,0,8:9,2|10,12:7,1|8,2|9,5:296.651:326.675,113.385:0.469019,0.469019:6.06932e-23,0.175327,0.824741
-chr1	3408702	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3408745;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.744024:21,21:20-22,20-22:9,10,0,12:20,2|21,7:8,1|9,1|10,2|11,1|12,3|15,1|17,1|18,1|19,1:231.355:366.612,131.36:0.579863,0.579863:0.970769,0.0292858,4.61147e-07	0/0:40:0.99681:22,22:22-23,22-23:13,11,0,15:22,13:4,1|6,1|7,1|8,1|9,3|12,1|14,1|15,2|16,2|19,1|21,1:274.457:326.675,113.385:0.284901,0.284901:2.11754e-16,0.000787401,0.999217
-chr1	3412976	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3413019;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:47:0.266334:24,28:22-25,17-31:9,24,0,12:22,2|24,7:4,1|7,1|10,1|12,1|15,2|17,1|21,1|23,2|25,1|28,1:373.177:366.612,131.36:1.01145,3.92624:1.8091e-41,2.66864e-13,1.0	0/1:36:0.371156:22,24:21-24,21-24:4,17,0,15:21,2|22,2:6,1|7,1|9,1|11,2|12,1|13,1|15,1|16,1|19,1|21,2|22,2|24,1:301.446:326.675,113.385:0.661813,1.29601:9.28366e-23,0.0855846,0.914515
-chr1	3413022	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=3413083;RU=tc;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.026846:1,1:1-6,1-6:0,28,0,0:NULL:NULL:246.2:366.612,131.36:1.43779,1.43779:0.994656,0.00535392,5.58523e-07	2/0:30:0.663264:29,31:29-31,30-31:8,16,0,6:29,3|30,2|31,3:5,1|10,1|14,1|23,1|26,1|31,1:243.069:326.675,113.385:0.638134,0.284901:1.47557e-10,0.955712,0.0443579
-chr1	3413143	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=3413186;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.98753:13,13:13-13,13-13:10,20,0,2:13,10:8,1|13,1:243.265:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:28:0.718486:22,22:21-22,21-22:5,13,0,9:22,5:5,1|7,1|11,2|12,1|18,1|19,1|20,1|21,1:216.602:326.675,113.385:0.442564,0.442564:1.43829e-06,0.128759,0.871339
-chr1	3415813	.	TAAATAAATAAA	.	.	.	END=3415824;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999965:3,3:2-3,2-3:18,12,0,0:3,18:NULL:174.415:366.612,131.36:0.431574,0.431574:0.0,3.20106e-05,0.999971	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.329:326.675,113.385:0.0,0.0:0.0,2.02195e-06,1.0
-chr1	3418452	.	ATGTATGTATGT	.	.	.	END=3418463;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:39,18,0,2:3,39:2,2:334.767:366.612,131.36:0.0,0.0:0.0,9.76423e-12,1.0	0/0:27:0.999963:3,3:3-3,3-3:18,9,0,0:3,18:NULL:159.97:326.675,113.385:0.0,0.0:0.0,2.95723e-05,0.999971
-chr1	3419362	.	CCTACCTACCTA	.	.	.	END=3419373;RU=ccta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:35,18,0,3:3,35:2,3:320.414:366.612,131.36:0.0,0.0:0.0,9.58282e-11,1.0	0/0:35:1.0:3,3:3-3,3-3:29,6,0,0:3,29:NULL:168.082:326.675,113.385:0.0,0.0:0.0,9.83807e-09,1.0
-chr1	3427014	.	TATCTATCTATC	.	.	.	END=3427025;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999856:3,3:3-3,3-3:16,23,0,0:3,16:NULL:269.899:366.612,131.36:0.0,0.0:0.0,0.000120938,0.99988	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.991:326.675,113.385:0.0,0.0:0.0,3.03433e-07,1.0
-chr1	3437788	.	AAACAAACAAAC	.	.	.	END=3437799;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,17,0,0:3,37:NULL:298.755:366.612,131.36:0.0,0.0:0.0,8.48512e-11,1.0	0/0:38:1.0:3,3:3-3,3-3:28,8,0,2:3,28:2,2:198.144:326.675,113.385:0.0,0.0:0.0,8.29792e-09,1.0
-chr1	3440889	.	AATAAATAAATA	.	.	.	END=3440900;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:32,10,0,0:3,32:NULL:214.287:366.612,131.36:0.0,0.0:0.0,1.03455e-09,1.0	0/0:25:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:119.376:326.675,113.385:0.0,0.0:0.0,2.36557e-06,1.0
-chr1	3442170	.	CCACCACCACCACCA	CCACCACCACCA	.	.	END=3442184;RU=cca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.188092:4,4:1-4,1-4:2,26,0,0:4,2:NULL:236.847:366.612,131.36:0.944183,0.944183:0.8773,0.122763,3.51555e-05	0/0:26:0.993269:5,5:5-5,5-5:11,15,0,0:5,11:NULL:183.557:326.675,113.385:0.0,0.0:4.64275e-28,0.00515572,0.994858
-chr1	3444468	.	AAGGAAGGAAGGAAGG	.	.	.	END=3444483;RU=aagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:21,22,0,0:4,21:NULL:283.756:366.612,131.36:0.0,0.0:0.0,6.78867e-06,0.999994	0/0:30:1.0:4,4:4-4,4-4:20,10,0,0:4,20:NULL:165.675:326.675,113.385:0.0,0.0:0.0,9.72115e-06,0.999993
-chr1	3452271	.	TTTGTTTGTTTG	.	.	.	END=3452282;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999857:3,3:3-3,3-3:16,14,0,0:3,16:NULL:192.804:366.612,131.36:0.0,0.0:0.0,0.000103879,0.999896	0/0:31:1.0:3,3:3-3,3-3:27,4,0,0:3,27:NULL:140.314:326.675,113.385:0.0,0.0:0.0,3.06181e-08,1.0
-chr1	3452589	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=3452612;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.466473:4,4:1-4,1-4:4,14,0,0:4,4:NULL:151.644:366.612,131.36:0.948533,0.948533:2.53305e-10,0.412736,0.587339	0/0:37:1.0:4,4:3-4,3-4:24,12,0,0:4,24:NULL:204.184:326.675,113.385:0.270063,0.270063:0.0,7.76877e-07,1.0
-chr1	3459217	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	END=3459272;RU=atct;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:1.0:13,13:13-13,13-13:20,22,0,19:13,20:2,1|4,3|5,1|6,2|7,3|9,3|10,1|11,3|12,2:426.507:366.612,131.36:0.0,0.0:1.0,2.32162e-06,3.05588e-32	0/0:67:0.999734:14,14:14-14,14-14:15,29,0,23:14,15:2,2|4,2|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2|13,4:499.709:326.675,113.385:0.0,0.0:2.04347e-33,0.00020263,0.999797
-chr1	3460396	.	GGGACGGGACGGGAC	.	.	.	END=3460410;RU=gggac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.469102:3,3:1-3,1-3:3,8,0,0:3,3:NULL:84.2472:366.612,131.36:0.472766,0.472766:9.34441e-11,0.268776,0.731226	0/0:14:0.990023:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6133:326.675,113.385:0.0,0.0:6.37805e-33,0.00536677,0.994647
-chr1	3462940	.	GTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=3462963;RU=gttt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.997688:10,10:10-10,10-10:12,12,0,8:10,12:2,1|3,2|5,1|6,3|8,1:219.73:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:44:0.999933:6,6:6-6,6-6:16,21,0,7:6,16:3,3|4,1|5,3:303.228:326.675,113.385:0.0,0.0:0.0,4.7846e-05,0.999955
-chr1	3470981	.	CACACACACACACACACACACACA	CA,CACACACACACACA	.	.	END=3471004;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:7:0.00609839:1,7:1-15,1-15:0,7,0,0:NULL:NULL:66.3926:366.612,131.36:4.33019,4.14174:0.229482,0.554589,0.215959	0/0:37:0.997233:12,12:10-12,10-12:12,11,0,12:12,12:6,2|7,1|9,3|10,3|11,3:246.658:326.675,113.385:0.422855,0.422855:8.55909e-17,0.00120403,0.9988
-chr1	3478864	.	ACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=3478881;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.995329:10,10:10-10,10-10:11,13,0,2:10,11:4,1|9,1:180.777:366.612,131.36:0.0,0.0:4.37525e-40,0.0012587,0.998747	0/0:23:0.455559:9,9:8-9,8-9:12,7,0,4:8,2|9,10:6,1|8,3:155.419:326.675,113.385:0.491073,0.491073:7.61899e-16,0.543848,0.456264
-chr1	3481278	.	TTTGTTTGTTTGTTTG	.	.	.	END=3481293;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999981:4,4:4-5,4-5:19,15,0,0:4,19:NULL:218.731:366.612,131.36:0.334882,0.334882:0.0,3.05595e-05,0.999971	0/0:42:1.0:4,4:4-4,4-4:28,8,0,6:4,28:3,6:224.482:326.675,113.385:0.0,0.0:0.0,8.98187e-09,1.0
-chr1	3483580	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=3483607;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.919819:19,19:5-20,5-20:18,23,0,8:18,2|19,14|20,2:5,1|6,1|9,1|10,1|14,1|17,2|19,1:371.263:366.612,131.36:6.99379,6.99379:0.0,3.84008e-05,0.999963	0/0:67:0.999998:14,14:14-14,14-14:40,15,0,12:12,3|13,4|14,31|15,2:4,1|5,1|6,4|7,1|8,1|10,1|11,1|13,2:431.313:326.675,113.385:0.19802,0.19802:1.95358e-39,5.81579e-06,0.999995
-chr1	3487177	.	CCATCCATCCAT	.	.	.	END=3487188;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:26,22,0,0:3,26:NULL:300.483:366.612,131.36:0.0,0.0:0.0,8.36725e-08,1.0	0/0:35:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:211.739:326.675,113.385:0.0,0.0:0.0,4.44959e-06,0.999995
-chr1	3487959	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3487988;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.918849:10,12:9-12,12-12:14,17,0,3:9,2|10,3|12,9:8,1|9,1|10,1:257.849:366.612,131.36:1.08161,0.0:1.0,3.86238e-06,1.11061e-21	0/0:33:0.984228:15,15:15-16,15-16:10,16,0,6:15,10:5,1|8,1|12,1|14,2|15,1:242.817:326.675,113.385:0.270063,0.270063:5.38519e-19,0.0034699,0.996541
-chr1	3487988	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATA	.	.	END=3488019;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.758499:10,11:10-14,10-14:4,18,0,0:10,2|11,2:NULL:187.38:366.612,131.36:1.91717,1.5352:0.993196,0.00682201,1.22632e-09	0/0:22:0.944694:16,16:15-17,15-17:9,10,0,0:16,9:NULL:136.375:326.675,113.385:0.4771,0.4771:1.98586e-11,0.0365298,0.963536
-chr1	3490427	.	GCGCGCGCGCGCGC	GCGCGCGCGCGC	.	.	END=3490440;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.0:6,6:6-6,6-6:25,20,0,0:6,25:NULL:282.87:366.612,131.36:0.0990099,0.0990099:1.0,1.37667e-07,2.663e-41	0/0:46:1.0:7,7:7-7,7-7:30,15,0,0:7,30:NULL:258.92:326.675,113.385:0.278639,0.278639:4.9453e-41,1.68511e-08,1.0
-chr1	3491872	.	CACACACACACA	CACACACACA,CACACACACACACACA	.	.	END=3491883;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:18:0.227788:8,8:7-8,7-8:2,15,0,0:8,2:NULL:141.248:366.612,131.36:0.59948,0.59948:2.72633e-08,0.258838,0.741169	1/0:25:0.986961:5,6:5-6,6-6:7,18,0,0:5,2|6,5:NULL:198.102:326.675,113.385:0.452422,0.0:5.90355e-10,0.98821,0.0118178
-chr1	3494930	.	CATTCATTCATTCATTCATTCATT	.	.	.	END=3494953;RU=catt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997386:6,6:6-6,6-6:12,9,0,5:6,12:3,2|4,2|5,1:167.591:366.612,131.36:0.0,0.0:3.95949e-32,0.00131093,0.998694	0/0:47:1.00001:6,6:6-6,6-6:22,15,0,10:6,22:3,4|4,4|5,2:295.517:326.675,113.385:0.0,0.0:0.0,1.17652e-06,1.0
-chr1	3496471	.	TTCTTTTCTTTTCTT	.	.	.	END=3496485;RU=ttctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:260.674:366.612,131.36:0.0,0.0:0.0,5.47066e-07,1.0	0/0:21:0.997268:3,3:1-3,1-3:12,8,0,0:3,12:NULL:120.166:326.675,113.385:0.991682,0.991682:7.039e-42,0.00157585,0.998429
-chr1	3496603	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3496632;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:54:0.283637:22,29:22-22,21-29:15,11,0,25:21,4|22,11:5,1|8,1|9,1|11,1|12,1|13,2|14,1|15,2|16,4|17,4|18,2|19,1|20,2|21,1|27,1:382.349:366.612,131.36:0.0,3.54444:0.0,0.0,1.0	0/0:29:0.984143:15,15:14-16,14-16:16,6,0,6:14,3|15,13:5,1|6,1|9,1|11,2|14,1:177.115:326.675,113.385:0.281439,0.281439:8.76319e-15,0.0152588,0.984773
-chr1	3499569	.	ACCCACCCACCC	ACCCACCCACCCACCCACCC	.	.	END=3499580;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:3:0.00263713:3,5:1-15,1-15:0,3,0,0:NULL:NULL:27.7607:366.612,131.36:5.93652,5.79452:0.00457848,0.154971,0.840537	0/0:18:0.997556:3,3:3-3,3-3:12,6,0,0:3,12:NULL:97.0083:326.675,113.385:0.0,0.0:3.21421e-31,0.00127003,0.998733
-chr1	3507557	.	ACAGACAGACAGACAGACAG	.	.	.	END=3507576;RU=acag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.99109:5,5:4-5,4-5:11,5,0,0:5,11:NULL:87.6499:366.612,131.36:0.437216,0.437216:3.1104e-29,0.00586497,0.99415	0/0:33:0.999946:5,5:5-5,5-5:17,11,0,5:5,17:3,1|4,4:205.65:326.675,113.385:0.0,0.0:1.1e-44,2.35347e-05,0.999979
-chr1	3507759	.	AACAACAACAAC	.	.	.	END=3507770;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999806:4,4:4-4,4-4:16,2,0,0:4,16:NULL:81.2805:366.612,131.36:0.0,0.0:0.0,0.000112515,0.999888	0/0:35:1.0:4,4:4-4,4-4:23,9,0,3:4,23:3,3:195.863:326.675,113.385:0.0,0.0:0.0,3.21403e-07,1.0
-chr1	3509243	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	.	END=3509290;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:0.901943:24,24:23-25,23-25:20,17,0,15:23,4|24,13|25,3:8,1|11,1|14,2|15,1|17,2|18,1|19,2|21,2|22,1|23,2:377.082:366.612,131.36:0.474835,0.474835:3.69924e-13,0.0100262,0.989998	0/0:35:0.889263:24,24:24-25,24-25:10,11,0,13:23,2|24,8:5,1|7,1|8,1|10,2|13,1|16,1|18,1|19,1|22,1|23,3:253.622:326.675,113.385:0.275098,0.275098:9.72665e-08,0.0958738,0.904227
-chr1	3509605	.	AAACAAAACAAAACA	.	.	.	END=3509619;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999867:3,3:3-3,3-3:16,7,0,0:3,16:NULL:126.671:366.612,131.36:0.0,0.0:0.0,6.98466e-05,0.999933	0/0:19:0.999027:3,3:3-3,3-3:13,6,0,0:3,13:NULL:106.151:326.675,113.385:0.0,0.0:1.49e-43,0.000556877,0.999446
-chr1	3510223	.	AAATAAATAAAT	.	.	.	END=3510234;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:164.508:366.612,131.36:0.0,0.0:0.0,6.1897e-06,0.999995	0/0:28:0.999264:3,3:3-3,3-3:13,12,0,3:3,13:2,3:182.213:326.675,113.385:0.0,0.0:2.11445e-40,0.000337643,0.999666
-chr1	3518996	.	TATTATTATTATTATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTATTATTAT	.	.	END=3519034;RU=tat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.996552:12,12:10-12,10-12:12,10,0,8:12,12:3,1|4,1|7,2|10,3|11,1:200.993:366.612,131.36:0.647134,0.647134:0.998178,0.0018276,7.66627e-17	0/0:27:0.95199:13,13:13-14,13-14:8,10,0,8:13,8:4,1|5,1|6,1|7,1|9,1|11,1|12,2:187.125:326.675,113.385:0.46122,0.46122:2.83563e-14,0.0151482,0.984883
-chr1	3519121	.	ACTCACTCACTC	.	.	.	END=3519132;RU=actc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:219.554:366.612,131.36:0.0,0.0:0.0,7.08751e-07,1.0	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:172.558:326.675,113.385:0.0,0.0:0.0,4.38183e-07,1.0
-chr1	3523067	.	TAATAATAATAATAATAATAATAATAA	TAA	.	.	END=3523093;RU=taa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.039164:1,1:1-5,1-5:0,13,0,0:NULL:NULL:123.852:366.612,131.36:1.14834,1.14834:0.581722,0.376272,0.0421281	0/0:38:0.461444:9,9:9-10,9-10:20,11,0,7:9,17|10,3:5,1|6,1|7,2|8,3:250.211:326.675,113.385:0.499387,0.499387:4.041e-34,3.47245e-06,1.0
-chr1	3527389	.	CATCCATCCATC	.	.	.	END=3527400;RU=catc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:230.582:366.612,131.36:0.0,0.0:0.0,1.79127e-08,1.0	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:317.531:326.675,113.385:0.0,0.0:0.0,1.12177e-10,1.0
-chr1	3529807	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAATAAATAAATAAAT	.	.	END=3529850;RU=aaat;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999979:9,9:9-9,9-9:18,11,0,8:9,18:3,1|4,1|5,1|6,2|8,3:233.364:366.612,131.36:0.0,0.0:0.999993,1.06837e-05,6.47422e-38	0/0:28:0.999428:11,11:11-11,11-11:14,8,0,6:11,14:3,1|5,1|7,1|9,2|10,1:177.812:326.675,113.385:0.0,0.0:4.52009e-32,0.000279724,0.999721
-chr1	3530404	.	TATTATTATTATTATTATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAT	.	.	END=3530445;RU=tat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.901029:17,17:17-17,17-17:7,11,0,10:17,7:4,1|7,2|8,1|12,2|13,1|15,2|16,1:203.867:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:42:0.992469:14,14:14-15,14-15:11,18,0,12:14,11:3,2|5,1|6,1|7,3|8,1|11,3|13,1:304.679:326.675,113.385:0.298675,0.298675:2.55207e-16,0.00392428,0.996088
-chr1	3537894	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3537913;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.385014:15,15:13-15,13-15:3,9,0,5:15,3:5,1|7,1|12,2|14,1:137.424:366.612,131.36:0.921165,0.921165:0.0,0.0,1.0	0/0:28:0.975432:10,10:9-11,9-11:15,8,0,4:9,2|10,13:5,1|7,1|8,1|9,1:171.686:326.675,113.385:0.43384,0.43384:2.5878e-18,0.0243184,0.975727
-chr1	3540990	.	TGTTGTTGTTGTTGT	.	.	.	END=3541004;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999861:5,5:5-5,5-5:16,16,0,2:5,16:4,2:226.904:366.612,131.36:0.0,0.0:0.0,7.16376e-05,0.999932	0/0:47:1.0:5,5:5-5,5-5:31,13,0,3:5,31:4,3:261.497:326.675,113.385:0.0,0.0:0.0,1.72273e-09,1.0
-chr1	3541012	.	TTGTTTTTTGTTTTTTGTTTT	TTGTTTTTTGTTTT	.	.	END=3541032;RU=ttgtttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999509:2,2:2-2,2-2:13,13,0,0:2,13:NULL:172.491:366.612,131.36:0.0,0.0:0.999758,0.000244667,2.76786e-40	0/0:40:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:225.609:326.675,113.385:0.0,0.0:0.0,7.44215e-08,1.0
-chr1	3554787	.	GTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGT	.	.	END=3554802;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.999986:9,9:9-9,9-9:18,12,0,7:9,18:6,1|7,2|8,4:237.054:366.612,131.36:0.139319,0.139319:0.0,5.68972e-07,1.0	0/0:49:0.98132:8,8:8-17,8-17:31,13,0,5:8,31:5,1|6,1|7,2|15,1:304.298:326.675,113.385:3.80811,3.80811:0.0,2.92854e-09,1.0
-chr1	3555544	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3555593;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:44:0.362242:21,23:21-21,22-24:8,16,0,19:21,8:5,1|6,1|8,1|10,1|11,1|12,4|13,2|15,3|19,2|22,2|23,1:343.558:366.612,131.36:0.0990099,0.615138:0.636692,0.363356,8.41314e-18	0/3:22:0.260705:25,27:22-25,22-27:2,8,0,10:25,2:8,1|10,2|12,1|13,1|18,1|19,1|22,1|24,1|27,1:166.814:326.675,113.385:1.14218,1.93736:2.32776e-09,0.0255083,0.974539
-chr1	3559181	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=3559216;RU=tc;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.539656:8,8:6-8,6-8:5,17,0,0:8,5:NULL:177.717:366.612,131.36:0.472766,0.472766:1.0,0.0,0.0	0/0:21:0.766734:18,18:16-18,16-18:6,8,0,5:18,6:5,2|12,1|14,1|16,1:138.427:326.675,113.385:0.74567,0.74567:7.06198e-09,0.110577,0.889519
-chr1	3559217	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3559264;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.831844:8,13:8-24,11-24:7,10,0,2:8,3|11,2|13,2:6,1|7,1:146.703:366.612,131.36:6.53897,4.86742:1.0,2.25946e-06,4.52011e-29	0/3:31:0.274637:24,32:24-25,24-33:4,8,0,18:24,4:5,1|7,1|9,2|11,1|12,1|14,3|16,2|19,1|20,2|22,1|23,1|25,1|32,1:237.468:326.675,113.385:0.412766,3.4929:4.38113e-20,9.92807e-07,1.0
-chr1	3559288	.	TCTCTCTCTCTC	.	.	.	END=3559299;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999953:6,6:6-6,6-6:18,12,0,0:6,18:NULL:183.101:366.612,131.36:0.0,0.0:1.7e-44,5.04122e-05,0.999949	0/0:38:0.983739:6,6:6-16,6-16:32,4,0,2:6,32:5,1|14,1:195.327:326.675,113.385:3.76974,3.76974:0.0,1.15641e-09,1.0
-chr1	3560915	.	AAACAAACAAACAAACAAAC	.	.	.	END=3560934;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999839:5,5:5-5,5-5:15,19,0,4:5,15:3,1|4,3:259.872:366.612,131.36:0.0,0.0:0.0,8.33776e-05,0.999918	0/0:39:1.0:5,5:5-5,5-5:23,12,0,4:5,23:4,3|5,1:230.346:326.675,113.385:0.0,0.0:0.0,2.06752e-07,1.0
-chr1	3567195	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3567244;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.815539:25,25:22-25,22-25:9,6,0,9:24,2|25,7:4,1|5,1|10,1|11,2|13,1|16,1|17,1|22,1:170.884:366.612,131.36:1.1105,1.1105:3.3225e-09,0.143123,0.85696	0/1:23:0.573095:25,26:10-25,10-26:6,8,0,7:24,2|25,4:6,1|7,1|8,1|14,1|17,1|21,1|26,1:169.038:326.675,113.385:7.14562,7.63548:2.708e-11,0.0172721,0.982767
-chr1	3568471	.	GATGGATGGATG	.	.	.	END=3568482;RU=gatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999924:3,3:3-3,3-3:16,15,0,2:3,16:2,2:214.124:366.612,131.36:0.0,0.0:0.0,4.05373e-05,0.999963	0/0:34:1.0:3,3:3-3,3-3:25,9,0,0:3,25:NULL:180.427:326.675,113.385:0.0,0.0:0.0,1.92562e-07,1.0
-chr1	3569699	.	GAGGAGGAGGAG	.	.	.	END=3569710;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:23,21,0,0:4,23:NULL:284.952:366.612,131.36:0.0,0.0:0.0,1.6216e-06,1.0	0/0:44:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:247.882:326.675,113.385:0.0990099,0.0990099:0.0,2.60625e-08,1.0
-chr1	3570098	.	CAAAACAAAACAAAA	.	.	.	END=3570112;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:194.924:366.612,131.36:0.0,0.0:0.0,2.27263e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:245.567:326.675,113.385:0.0,0.0:0.0,7.38688e-08,1.0
-chr1	3570893	.	ATATCATATCATATATATCATATCATATATATCATATCATAT	.	.	.	END=3570934;RU=atatcatatcatat;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.984638:3,3:3-3,3-3:10,10,0,0:3,10:NULL:133.018:366.612,131.36:0.0,0.0:1.3946e-12,0.0121244,0.9879	0/0:23:0.994483:3,3:3-3,3-3:11,10,0,2:3,11:2,2:148.089:326.675,113.385:0.0,0.0:7.66727e-14,0.00376926,0.99624
-chr1	3574648	.	CACACACACACACACACACACACA	CACA,CACACACACACACACA	.	.	END=3574671;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.986214:2,8:1-12,3-12:4,32,0,2:2,2|8,2:5,1|7,1:334.309:366.612,131.36:1.82748,2.18962:0.999941,6.0901e-05,4.05663e-13	0/0:48:0.999993:12,12:5-12,5-12:20,21,0,5:12,20:7,1|8,1|9,2|11,1:323.513:326.675,113.385:2.41896,2.41896:2.44051e-28,1.74376e-05,0.999986
-chr1	3575668	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3575713;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.111384:14,22:12-24,22-24:2,20,0,6:22,2:7,2|8,1|9,1|13,1|17,1:240.982:366.612,131.36:5.29045,0.837205:0.887813,0.108392,0.00390201	0/3:60:0.278433:23,28:23-23,22-31:14,24,0,22:22,4|23,10:4,2|5,1|7,2|8,3|9,1|10,1|11,1|12,1|13,3|14,2|15,1|18,1|19,2|28,1:485.687:326.675,113.385:0.0,3.12812:3.576e-14,0.000275774,0.999727
-chr1	3576109	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	ATAGATAGATAGATAG,ATAGATAGATAGATAGATAG	.	.	END=3576152;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.997672:4,5:4-4,4-5:15,21,0,0:4,10|5,5:NULL:273.219:366.612,131.36:0.0,0.390807:1.0,0.0,0.0	0/0:59:1.0:11,11:11-11,11-11:24,18,0,17:11,24:3,4|5,3|6,1|7,1|8,2|9,2|10,4:388.513:326.675,113.385:0.0,0.0:1.17738e-30,7.58134e-07,1.0
-chr1	3576169	.	TAAATAAATAAATAAATAAATAAA	TAAATAAATAAA	.	.	END=3576192;RU=taaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.629186:3,3:3-4,3-4:21,24,0,0:3,19|4,2:NULL:322.466:366.612,131.36:0.491073,0.491073:1.0,1.28293e-06,0.0	0/0:56:1.0:6,6:6-6,6-6:32,18,0,6:6,32:3,2|4,1|5,3:335.677:326.675,113.385:0.0,0.0:0.0,1.09011e-09,1.0
-chr1	3576190	.	AAACAAACAAAC	AAAC	.	.	END=3576201;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0705051:1,1:1-2,1-2:0,20,0,0:NULL:NULL:187.471:366.612,131.36:0.572034,0.572034:0.267009,0.523725,0.209271	0/0:49:1.0:3,3:3-3,3-3:35,14,0,0:3,35:NULL:265.705:326.675,113.385:0.0,0.0:0.0,2.63675e-10,1.0
-chr1	3576505	.	TAGTAGTAGTAGTAGTAGTAGTAGTAG	TAGTAG	.	.	END=3576531;RU=tag;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.325152:2,2:2-8,2-8:3,9,0,0:2,3:NULL:89.3921:366.612,131.36:2.97837,2.97837:0.857414,0.14267,5.98554e-12	0/0:32:1.00001:9,9:9-9,9-9:20,8,0,3:9,20:7,2|8,1:176.424:326.675,113.385:0.139319,0.139319:1.07664e-33,4.93298e-06,0.999995
-chr1	3576606	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=3576674;RU=aga;PERIOD=3;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:18:0.0196081:28,39:12-39,15-40:0,6,0,12:NULL:6,1|8,1|12,4|14,1|18,1|25,2|28,1|37,1:148.215:366.612,131.36:8.12156,7.60409:7.34188e-30,0.228657,0.771374	0/1:30:0.984391:23,24:22-25,23-25:8,12,0,8:23,4|24,4:4,1|10,1|13,1|14,1|15,2|16,1|21,1:207.178:326.675,113.385:0.691512,0.390054:2.67454e-12,0.000776178,0.999226
-chr1	3577214	.	CAATCAATCAAT	.	.	.	END=3577225;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999312:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.142:366.612,131.36:0.0,0.0:0.0,0.000428151,0.999575	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:157.478:326.675,113.385:0.0,0.0:0.0,1.38944e-06,1.0
-chr1	3581254	.	CAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	END=3581273;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.924424:9,9:8-9,8-9:8,8,0,0:9,8:NULL:113.429:366.612,131.36:0.442564,0.442564:0.0,0.0,1.0	0/0:23:0.99584:5,5:5-5,5-5:11,7,0,5:5,11:3,3|4,2:146.225:326.675,113.385:0.0,0.0:2.42381e-38,0.00168218,0.998322
-chr1	3585710	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3585763;RU=ac;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.988159:19,19:19-19,19-19:11,14,0,0:19,11:NULL:180.75:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/2:31:0.294279:27,30:25-27,24-30:6,8,0,15:25,2|27,4:5,1|6,1|11,2|12,1|17,1|19,1|20,2|22,1|23,1|24,2|25,1|30,1:227.254:326.675,113.385:0.839893,2.50693:2.65437e-10,0.000150105,0.99985
-chr1	3588411	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=3588450;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:42:0.404092:18,20:17-18,16-20:14,12,0,16:16,3|17,2|18,9:4,1|5,5|7,1|12,3|13,1|14,2|17,2|20,1:318.935:366.612,131.36:0.275098,1.43157:0.000363908,0.999637,5.75798e-15	2/0:47:0.545097:19,20:18-20,18-20:14,18,0,15:18,3|19,3|20,8:5,1|6,1|7,1|9,1|11,1|13,2|14,3|16,1|17,3|18,1:355.199:326.675,113.385:0.840593,0.339533:7.22038e-07,0.88835,0.111751
-chr1	3589857	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3589900;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.94442:20,20:19-21,19-21:9,10,0,7:20,9:4,1|5,2|7,1|8,2|19,1:191.577:366.612,131.36:0.417958,0.417958:0.984787,0.0152459,6.41648e-11	0/0:35:0.776566:22,22:20-22,20-22:10,10,0,14:21,3|22,7:10,4|12,1|13,1|14,2|15,2|19,3|22,1:252.111:326.675,113.385:0.669325,0.669325:8.57183e-15,0.206472,0.793575
-chr1	3590265	.	ATATATATATATAT	ATATAT	.	.	END=3590278;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999755:3,3:1-3,1-3:15,16,0,0:3,15:NULL:213.737:366.612,131.36:0.851255,0.851255:1.0,0.0,0.0	0/0:32:0.999979:7,7:7-7,7-7:19,12,0,0:7,19:NULL:186.993:326.675,113.385:0.0990099,0.0990099:1.38016e-34,2.74559e-05,0.999972
-chr1	3593993	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=3594042;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00116688:2,2:2-12,2-12:0,4,0,0:NULL:NULL:34.3347:366.612,131.36:2.8056,2.8056:0.296546,0.547881,0.155608	0/2:43:0.31823:25,34:24-25,13-34:9,16,0,17:23,2|24,2|25,5:6,2|8,2|9,1|10,1|11,1|17,2|18,1|19,3|24,3|33,1:340.608:326.675,113.385:0.469854,9.1742:2.0047e-08,0.00153837,0.998466
-chr1	3594304	.	TTTGTTTTGTTTTGT	TTTGTTTTGTTTTGTTTTGT	.	.	END=3594318;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999784:4,4:4-4,4-4:15,21,0,5:4,15:2,1|3,4:300.965:366.612,131.36:0.0,0.0:0.0,2.69095e-05,0.999972	0/0:36:0.999996:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.331:326.675,113.385:0.0,0.0:0.0,1.13909e-05,0.999988
-chr1	3595528	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3595547;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999943:6,6:6-6,6-6:17,12,0,6:6,17:2,1|3,2|5,3:219.837:366.612,131.36:0.0,0.0:0.0,7.38434e-06,0.999994	0/0:43:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:3,2|4,4|5,1:263.14:326.675,113.385:0.0,0.0:0.0,2.20549e-07,1.0
-chr1	3597713	.	CCACCCACCCAC	.	.	.	END=3597724;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:26,27,0,0:3,26:NULL:356.282:366.612,131.36:0.0,0.0:0.0,1.9024e-07,1.0	0/0:61:1.0:3,3:3-3,3-3:33,25,0,3:3,33:2,3:380.699:326.675,113.385:0.0,0.0:0.0,3.59453e-10,1.0
-chr1	3598374	.	AGAGAGAGAGAGAG	AG	.	.	END=3598387;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0669496:1,1:1-3,1-3:0,13,0,0:NULL:NULL:121.25:366.612,131.36:0.913899,0.913899:1.0,0.0,0.0	0/0:32:0.999993:7,7:6-7,6-7:19,10,0,2:7,19:4,1|6,1:177.761:326.675,113.385:0.21692,0.21692:0.0,1.1847e-05,0.999987
-chr1	3599536	.	ATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATAT	.	.	END=3599577;RU=at;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.123078:15,15:12-16,12-16:2,6,0,0:15,2:NULL:67.6077:366.612,131.36:1.89137,1.89137:1.0,0.0,0.0	2/2:8:0.155543:20,20:20-22,20-22:2,4,0,0:20,2:NULL:50.4491:326.675,113.385:0.906252,0.906252:0.466256,0.47373,0.060177
-chr1	3599896	.	AAACAAACAAAC	.	.	.	END=3599907;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.998658:3,3:3-4,3-4:13,8,0,0:3,13:NULL:122.393:366.612,131.36:0.46122,0.46122:2.46323e-38,0.000685506,0.999317	0/0:39:1.00001:3,3:3-3,3-3:21,14,0,4:3,21:2,3|3,1:241.059:326.675,113.385:0.0,0.0:0.0,5.51798e-07,1.0
-chr1	3600086	.	ACAAACAAACAAACAAACAA	.	.	.	END=3600105;RU=acaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:5,5:5-5,5-5:20,13,0,6:5,20:4,6:238.826:366.612,131.36:0.0,0.0:0.0,2.78696e-06,1.0	0/0:48:1.0:5,5:5-5,5-5:28,17,0,3:5,28:4,3:294.706:326.675,113.385:0.0,0.0:0.0,9.54704e-09,1.0
-chr1	3608018	.	TTGTTTGTTTGT	.	.	.	END=3608029;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,13,0,5:3,27:2,4|3,1:267.245:366.612,131.36:0.0,0.0:0.0,1.50003e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:36,7,0,0:3,36:NULL:206.438:326.675,113.385:0.0,0.0:0.0,1.14619e-10,1.0
-chr1	3608156	.	TTTGTTTGTTTGTTTG	.	.	.	END=3608171;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:25,15,0,2:4,25:2,1|3,1:249.862:366.612,131.36:0.0,0.0:0.0,3.34792e-07,1.0	0/0:47:1.0:4,4:4-4,4-4:25,16,0,6:4,25:3,6:283.617:326.675,113.385:0.0,0.0:0.0,9.75639e-08,1.0
-chr1	3610003	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=3610046;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.646453:23,23:22-24,22-24:14,12,0,16:22,4|23,10:5,1|6,2|7,2|9,2|15,2|16,1|17,2|20,3|22,1:307.269:366.612,131.36:0.451337,0.451337:1.95176e-26,0.000370915,0.99963	0/0:52:0.999485:22,22:22-22,22-22:16,16,0,19:22,16:5,1|6,1|8,1|9,2|10,1|11,2|12,1|13,1|15,1|16,2|17,2|19,2|21,1|22,1:373.435:326.675,113.385:0.0,0.0:9.25308e-26,9.79314e-05,0.999903
-chr1	3612774	.	AAAGAAAGAAAGAAAG	.	.	.	END=3612789;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.210875:4,4:1-4,1-4:2,10,0,0:4,2:NULL:94.1995:366.612,131.36:1.38593,1.38593:2.8758e-07,0.546696,0.453414	0/0:49:1.0:4,4:4-4,4-4:26,19,0,4:4,26:3,4:315.785:326.675,113.385:0.0,0.0:0.0,7.2981e-08,1.0
-chr1	3613442	.	CTGCTGCTGCTG	.	.	.	END=3613453;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.999998:4,4:4-5,4-5:20,30,0,0:4,20:NULL:345.283:366.612,131.36:0.236383,0.236383:0.0,1.51018e-05,0.999986	0/0:54:1.0:4,4:4-4,4-4:37,17,0,0:4,37:NULL:294.658:326.675,113.385:0.0,0.0:0.0,9.79091e-11,1.0
-chr1	3630160	.	AATTAATTAATT	.	.	.	END=3630171;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999879:3,3:3-3,3-3:16,13,0,0:3,16:NULL:181.582:366.612,131.36:0.0,0.0:0.0,8.50016e-05,0.999917	0/0:23:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:109.798:326.675,113.385:0.0,0.0:0.0,8.58725e-06,0.999994
-chr1	3631051	.	ATTAATTAATTA	.	.	.	END=3631062;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998978:3,3:3-3,3-3:15,25,0,0:3,15:NULL:289.134:366.612,131.36:0.0,0.0:0.0,0.000866248,0.999135	0/0:37:1.00001:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.256:326.675,113.385:0.0,0.0:0.0,5.80739e-07,1.0
-chr1	3638662	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=3638693;RU=tgtt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.999957:6,6:6-6,6-6:17,25,0,4:6,17:3,2|5,2:331.039:366.612,131.36:0.0,0.0:0.999995,5.32595e-06,0.0	0/0:65:1.0:8,8:8-8,8-8:24,26,0,15:8,24:2,2|3,1|4,3|5,2|6,1|7,6:454.389:326.675,113.385:0.0,0.0:0.0,3.53291e-07,1.0
-chr1	3639042	.	AAGAAAGAAAGA	.	.	.	END=3639053;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,13,0,3:3,25:2,3:236.707:366.612,131.36:0.0,0.0:0.0,5.6034e-08,1.0	0/0:63:1.0:3,3:3-3,3-3:48,15,0,0:3,48:NULL:321.101:326.675,113.385:0.0,0.0:0.0,1.76623e-14,1.0
-chr1	3649526	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3649573;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.837773:21,21:20-21,20-21:6,20,0,16:21,6:5,1|6,1|7,2|12,2|13,2|14,2|15,2|16,1|19,2|20,1:340.528:366.612,131.36:0.298675,0.298675:0.986037,0.0139951,1.83348e-12	0/0:29:0.862321:24,24:23-24,23-24:7,9,0,12:24,7:5,1|6,1|8,1|9,1|10,1|12,1|14,1|15,1|19,3|21,1:206.345:326.675,113.385:0.253975,0.253975:3.65728e-09,0.0713484,0.928746
-chr1	3650739	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=3650782;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.998517:15,15:11-15,11-15:20,10,0,5:14,3|15,17:9,4|10,1:222.223:366.612,131.36:1.16277,1.16277:1.0,0.0,0.0	0/0:60:0.808444:22,22:19-22,19-22:17,13,0,28:21,5|22,12:4,2|5,1|7,1|8,5|9,2|10,3|13,2|14,1|16,2|17,1|18,2|19,1|20,1|21,3|22,1:426.994:326.675,113.385:0.695329,0.695329:1.83475e-18,0.191368,0.808688
-chr1	3651177	.	AAGGAAGGAAGG	.	.	.	END=3651188;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:219.182:366.612,131.36:0.0,0.0:0.0,2.11714e-06,1.0	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.048:326.675,113.385:0.0,0.0:0.0,7.46354e-08,1.0
-chr1	3652162	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=3652195;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.916268:17,17:16-17,16-17:16,21,0,5:16,4|17,12:8,1|9,1|12,1|14,2:316.434:366.612,131.36:0.382696,0.382696:1.15124e-12,0.0835824,0.916516	0/0:23:0.752574:17,17:16-17,16-17:11,9,0,3:16,3|17,8:9,2|15,1:160.628:326.675,113.385:0.412766,0.412766:1.17992e-08,0.24142,0.758596
-chr1	3652198	.	ATGTATGTATGT	.	.	.	END=3652209;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:252.979:366.612,131.36:0.0,0.0:0.0,2.25692e-06,1.0	0/0:21:0.999242:3,3:3-3,3-3:14,7,0,0:3,14:NULL:121.301:326.675,113.385:0.0,0.0:1.08e-42,0.000431677,0.999569
-chr1	3652267	.	ATTTATTTATTT	.	.	.	END=3652278;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:221.678:366.612,131.36:0.0,0.0:0.0,5.64366e-06,0.999995	0/0:24:0.999819:3,3:3-3,3-3:16,8,0,0:3,16:NULL:137.147:326.675,113.385:0.0,0.0:0.0,0.000102968,0.999896
-chr1	3653461	.	GTGGGTGGGTGG	.	.	.	END=3653472;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,27,0,0:3,29:NULL:360.913:366.612,131.36:0.0,0.0:0.0,5.32789e-08,1.0	0/0:25:0.999931:3,3:3-3,3-3:17,8,0,0:3,17:NULL:136.47:326.675,113.385:0.0,0.0:0.0,3.93278e-05,0.999963
-chr1	3655005	.	ATAAATAAATAAATAAATAAATAA	.	.	.	END=3655028;RU=ataa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999914:6,6:6-6,6-6:17,11,0,0:6,17:NULL:169.944:366.612,131.36:0.0,0.0:0.0,6.7504e-05,0.999933	0/0:22:0.999:6,6:6-6,6-6:13,7,0,2:6,13:5,2:129.011:326.675,113.385:0.0,0.0:8.21165e-40,0.000428176,0.999575
-chr1	3658217	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3658262;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.402513:28,28:27-28,27-28:6,11,0,12:27,2|28,4:6,3|9,1|10,1|17,1|18,1|22,1|23,1|24,2|27,1:222.141:366.612,131.36:0.478946,0.478946:0.0,0.0,1.0	0/0:35:0.928376:23,23:21-24,21-24:11,8,0,14:22,2|23,9:5,1|8,1|10,2|14,2|16,1|19,2|20,2|22,3:236.441:326.675,113.385:0.507951,0.507951:9.4495e-09,0.0600128,0.940076
-chr1	3658997	.	TAAAATAAAATAAAA	.	.	.	END=3659011;RU=taaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:243.445:366.612,131.36:0.0,0.0:0.0,2.70447e-07,1.0	0/0:31:0.993071:3,3:3-3,3-3:10,19,0,2:3,10:2,2:238.715:326.675,113.385:0.0,0.0:7.02703e-33,0.00430459,0.995704
-chr1	3659687	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3659732;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.525084:21,21:17-23,17-23:16,12,0,14:19,2|20,4|21,10:8,4|9,1|10,2|12,1|13,2|14,2|16,1|19,1:310.77:366.612,131.36:0.992275,0.992275:0.999879,0.000123886,3.17682e-17	0/0:50:0.973781:23,23:14-23,14-23:10,17,0,20:23,10:4,1|5,1|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,2|18,1|20,1|21,1:361.452:326.675,113.385:4.1361,4.1361:2.24582e-11,0.0119948,0.988032
-chr1	3660735	.	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	.	END=3660759;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.998797:5,5:5-5,5-5:12,21,0,9:5,12:3,6|4,2|5,1:312.548:366.612,131.36:0.0,0.0:0.0,0.000756779,0.999248	0/0:35:1.0:5,5:5-5,5-5:23,7,0,5:5,23:3,1|4,4:194.246:326.675,113.385:0.0,0.0:0.0,3.25399e-07,1.0
-chr1	3661144	.	TGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG	.	.	END=3661161;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:1.0:11,11:11-11,11-11:36,20,0,7:10,3|11,33:4,1|5,2|6,1|7,1|9,1|10,1:390.389:366.612,131.36:0.0,0.0:0.0,4.32167e-11,1.0	0/0:37:1.0:9,9:9-9,9-9:20,11,0,4:9,20:5,1|6,1|8,1|9,1:215.734:326.675,113.385:0.0,0.0:1.8807e-38,4.27597e-06,0.999995
-chr1	3667713	.	AACAAACAAACA	.	.	.	END=3667724;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:231.239:366.612,131.36:0.0,0.0:0.0,4.28522e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:192.588:326.675,113.385:0.0,0.0:0.0,4.54549e-06,0.999995
-chr1	3671145	.	GCAGCAGCAGCAGCA	.	.	.	END=3671159;RU=gca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:5,5:5-5,5-5:33,28,0,0:4,2|5,31:NULL:397.821:366.612,131.36:0.0990099,0.0990099:0.0,8.92102e-07,1.0	0/0:41:1.0:5,5:5-5,5-5:21,18,0,2:5,21:3,1|4,1:268.021:326.675,113.385:0.0,0.0:0.0,4.46015e-06,0.999995
-chr1	3671658	.	GCCGCCGCCGCCGCC	.	.	.	END=3671672;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:23,21,0,0:5,23:NULL:285.729:366.612,131.36:0.0,0.0:0.0,1.51329e-06,1.0	0/0:80:1.0:5,5:5-5,5-5:45,33,0,2:5,45:4,2:511.722:326.675,113.385:0.0,0.0:0.0,2.72444e-13,1.0
-chr1	3672852	.	CACCACCACCAC	CAC	.	.	END=3672863;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0545822:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.243:366.612,131.36:0.623212,0.623212:0.349383,0.488596,0.162064	0/0:6:0.242123:4,4:1-4,1-4:2,4,0,0:4,2:NULL:41.7069:326.675,113.385:0.857222,0.857222:4.36802e-06,0.405199,0.59487
-chr1	3673065	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	END=3673124;RU=cttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.48575:18,18:17-18,17-18:3,10,0,6:18,3:2,1|5,1|7,1|8,1|12,1|17,1:156.234:366.612,131.36:0.478946,0.478946:2.14036e-22,0.0868164,0.91328	0/0:20:0.66215:15,15:13-15,13-15:5,10,0,5:15,5:3,1|5,1|7,1|10,1|13,1:152.866:326.675,113.385:0.404368,0.404368:4.1154e-10,0.210486,0.789562
-chr1	3673125	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3673174;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.109:18,18:15-19,15-19:2,10,0,0:18,2:NULL:106.067:366.612,131.36:1.60555,1.60555:1.0,0.0,0.0	2/2:20:0.0214122:24,24:23-26,23-26:0,10,0,6:NULL:5,1|6,1|12,1|16,1|21,1|24,1:143.116:326.675,113.385:1.0234,1.0234:0.120437,0.554704,0.325002
-chr1	3677305	.	AGAGAGAGAGAG	.	.	.	END=3677316;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:6,6:6-6,6-6:23,20,0,0:6,23:NULL:282.976:366.612,131.36:0.0,0.0:0.0,1.29706e-06,1.0	0/0:36:1.0:6,6:6-6,6-6:24,10,0,2:6,24:5,2:207.0:326.675,113.385:0.0,0.0:0.0,1.97072e-07,1.0
-chr1	3679100	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=3679119;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999952:4,4:4-4,4-4:17,14,0,3:4,17:2,1|3,2:216.889:366.612,131.36:0.0,0.0:0.999971,3.05182e-05,8.95878e-40	0/0:36:1.0:5,5:5-5,5-5:26,7,0,3:5,26:4,3:191.379:326.675,113.385:0.0,0.0:0.0,4.85084e-08,1.0
-chr1	3680409	.	TTTTGTTTTGTTTTG	.	.	.	END=3680423;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999047:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.587:366.612,131.36:0.0,0.0:2.2255e-41,0.000601739,0.999401	0/0:39:1.0:3,3:3-3,3-3:24,12,0,3:3,24:2,3:227.682:326.675,113.385:0.0,0.0:0.0,2.28936e-07,1.0
-chr1	3681094	.	TCTATCTATCTA	.	.	.	END=3681105;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999866:3,3:3-3,3-3:16,8,0,0:3,16:NULL:135.989:366.612,131.36:0.0,0.0:0.0,8.57214e-05,0.999917	0/0:48:1.0:3,3:3-3,3-3:32,13,0,3:3,32:2,3:264.039:326.675,113.385:0.0,0.0:0.0,8.76106e-10,1.0
-chr1	3686501	.	TATATATATATATATATATATATATATATATATATATA	TA	.	.	END=3686538;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0184747:1,1:1-4,1-4:0,23,0,0:NULL:NULL:207.554:366.612,131.36:0.993953,0.993953:0.873247,0.124515,0.00234243	0/0:13:0.782299:19,19:19-19,19-19:6,7,0,0:19,6:NULL:88.745:326.675,113.385:0.417958,0.417958:3.40388e-08,0.123674,0.876425
-chr1	3688514	.	AAACAAACAAACAAAC	.	.	.	END=3688529;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999971:4,4:4-4,4-4:17,13,0,2:4,17:3,2:208.339:366.612,131.36:0.0,0.0:0.0,2.13281e-05,0.999979	0/0:29:0.999821:4,4:4-4,4-4:17,12,0,0:4,17:NULL:183.456:326.675,113.385:0.0,0.0:0.0,0.00014699,0.999856
-chr1	3689585	.	GTGGGTGGGTGGGTGG	.	.	.	END=3689600;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.846048:4,4:2-4,2-4:6,25,0,2:4,6:2,1|3,1:254.143:366.612,131.36:0.485452,0.485452:1.57694e-16,0.0988066,0.901298	0/0:40:0.980853:4,4:4-4,4-4:9,28,0,3:4,9:3,3:307.763:326.675,113.385:0.0,0.0:1.30993e-24,0.0128877,0.987141
-chr1	3693848	.	TCTCTGTCTCTGTCTCTG	.	.	.	END=3693865;RU=tctctg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:224.771:366.612,131.36:0.0,0.0:0.0,4.71796e-07,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:201.695:326.675,113.385:0.0,0.0:0.0,1.96197e-06,1.0
-chr1	3693870	.	TGTGTGTGTGTGTG	.	.	.	END=3693883;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:7,7:7-7,7-7:20,10,0,2:7,20:4,1|6,1:186.249:366.612,131.36:0.0,0.0:6.01707e-37,5.85978e-06,0.999995	0/0:30:0.999913:7,7:7-8,7-8:17,8,0,3:7,17:6,3:159.633:326.675,113.385:0.261581,0.261581:1.32769e-31,2.84845e-05,0.999972
-chr1	3695906	.	TTTTATTTTATTTTA	TTTTATTTTATTTTATTTTA	.	.	END=3695920;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.977606:4,4:4-4,4-4:9,10,0,2:4,9:3,2:143.282:366.612,131.36:0.0,0.0:0.0,0.00535545,0.994656	0/0:28:0.999485:3,3:3-3,3-3:14,12,0,2:3,14:2,2:185.671:326.675,113.385:0.0,0.0:1.2918e-40,0.000265004,0.999736
-chr1	3699904	.	CTTTCTTTCTTT	.	.	.	END=3699915;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997682:3,3:3-3,3-3:13,13,0,0:3,13:NULL:177.632:366.612,131.36:0.0,0.0:3.5e-43,0.00138937,0.998617	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:175.035:326.675,113.385:0.0,0.0:0.0,3.71979e-07,1.0
-chr1	3700824	.	CATCATCATCAT	.	.	.	END=3700835;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:24,21,0,4:4,24:3,4:317.857:366.612,131.36:0.0,0.0:0.0,3.12785e-07,1.0	0/0:66:1.0:4,4:4-4,4-4:47,15,0,4:4,47:3,4:350.769:326.675,113.385:0.0,0.0:0.0,3.01842e-14,1.0
-chr1	3702280	.	AAATAAATAAAT	.	.	.	END=3702291;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:24,15,0,2:3,24:2,2:246.834:366.612,131.36:0.0,0.0:0.0,6.36609e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.624:326.675,113.385:0.0,0.0:0.0,2.31843e-06,1.0
-chr1	3702293	.	AAATAAAATAAAATA	.	.	.	END=3702307;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:226.913:366.612,131.36:0.0,0.0:0.0,1.69776e-06,1.0	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:143.124:326.675,113.385:0.0,0.0:0.0,9.21183e-06,0.999993
-chr1	3708462	.	GAGAGAGAGAGAGA	GAGAGAGAGA	.	.	END=3708475;RU=ga;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.00667709:5,5:1-6,1-6:0,9,0,0:NULL:NULL:84.5076:366.612,131.36:1.98272,1.98272:0.147395,0.516524,0.336216	0/0:28:0.999898:7,7:7-7,7-7:17,7,0,3:7,17:4,1|5,1|6,1:157.139:326.675,113.385:0.0990099,0.0990099:1.44551e-31,3.82113e-05,0.999963
-chr1	3712175	.	ACACACACACACACACACACACACACAC	ACACACACACACACAC	.	.	END=3712202;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.723808:8,8:7-11,7-11:5,16,0,4:8,5:6,2|7,1|8,1:197.448:366.612,131.36:1.37592,1.37592:0.976772,0.0232742,1.39106e-16	0/0:38:0.866293:14,14:13-16,13-16:15,14,0,7:13,3|14,12:6,1|7,1|9,2|10,1|12,1|13,1:256.427:326.675,113.385:0.696456,0.696456:1.35313e-13,0.133089,0.867002
-chr1	3712203	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=3712260;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0579816:30,32:30-33,30-33:0,12,0,7:NULL:5,1|7,1|8,3|11,1|15,1:169.773:366.612,131.36:1.06793,1.04894:0.0,0.0,1.0	0/0:41:0.954639:29,29:24-30,24-30:11,12,0,14:28,2|29,9:5,1|6,1|7,1|13,1|14,1|15,1|16,1|18,1|19,1|20,2|21,1|24,1|29,1:276.241:326.675,113.385:1.67885,1.67885:5.44121e-18,0.0265952,0.973455
-chr1	3719601	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=3719644;RU=ag;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:19:0.0347453:30,33:10-32,10-32:0,9,0,8:NULL:13,1|14,1|19,1|20,1|22,1|26,1|28,1|30,1:149.785:366.612,131.36:9.11023,9.18537:1.2421e-29,0.214365,0.785679	0/1:38:0.465736:22,25:21-22,20-25:16,11,0,11:20,5|21,3|22,8:7,1|10,2|14,2|15,2|20,1|21,1|24,1|25,1:285.322:326.675,113.385:0.358902,1.23703:2.13583e-17,1.41103e-05,0.999987
-chr1	3719848	.	CCAGCCAGCCAG	.	.	.	END=3719859;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:216.479:366.612,131.36:0.0,0.0:0.0,8.62623e-07,1.0	0/0:46:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:288.791:326.675,113.385:0.0,0.0:0.0,1.16681e-07,1.0
-chr1	3720011	.	GTGGTGGTGGTG	.	.	.	END=3720022;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:25,15,0,0:4,25:NULL:234.32:366.612,131.36:0.0,0.0:0.0,2.50935e-07,1.0	0/0:47:1.0:4,4:4-4,4-4:35,12,0,0:4,35:NULL:254.334:326.675,113.385:0.0,0.0:0.0,2.74008e-10,1.0
-chr1	3722193	.	CACCACCACCAC	.	.	.	END=3722204;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999986:4,4:4-4,4-4:19,20,0,0:4,19:NULL:255.587:366.612,131.36:0.0,0.0:0.0,2.0731e-05,0.999979	0/0:36:0.999995:4,4:4-4,4-4:20,16,0,0:4,20:NULL:226.869:326.675,113.385:0.0,0.0:0.0,1.35846e-05,0.999987
-chr1	3724786	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=3724835;RU=ct;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.920241:8,8:7-8,7-8:11,6,0,0:7,2|8,9:NULL:107.946:366.612,131.36:0.311527,0.311527:1.0,0.0,0.0	0/2:64:0.88837:25,27:13-26,13-27:13,28,0,22:23,2|25,8|26,3:5,1|7,3|9,1|12,2|13,2|14,1|15,2|16,1|19,2|20,1|22,1|23,1|24,3|27,1:510.895:326.675,113.385:3.432,4.39533:6.1595e-17,1.69852e-07,1.0
-chr1	3724835	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG	.	.	END=3724868;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.704735:7,7:6-19,6-19:14,10,0,0:6,2|7,12:NULL:156.457:366.612,131.36:5.39532,5.39532:0.999773,0.000228516,0.0	0/0:70:1.0:17,17:8-17,8-17:27,26,0,15:17,27:4,2|5,2|7,1|8,4|9,1|13,1|14,3|15,1:469.515:326.675,113.385:2.68881,2.68881:0.0,8.94391e-08,1.0
-chr1	3726870	.	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTC	.	.	END=3726905;RU=cttc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.995342:6,7:6-9,7-9:6,5,0,0:6,2|7,4:NULL:80.5326:366.612,131.36:1.26508,0.526896:0.999614,0.000386882,3.11278e-14	0/0:21:0.670658:9,9:9-9,9-9:5,13,0,3:9,5:3,1|6,2:160.314:326.675,113.385:0.19802,0.19802:7.56913e-10,0.260988,0.739012
-chr1	3727052	.	CCACCCACCCAC	.	.	.	END=3727063;RU=ccac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999387:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.249:366.612,131.36:0.0,0.0:0.0,0.000337427,0.999666	0/0:44:1.0:3,3:3-3,3-3:31,9,0,4:3,31:2,3|3,1:231.54:326.675,113.385:0.0,0.0:0.0,5.74388e-10,1.0
-chr1	3727955	.	CACACACACACA	CACACA,CACACACACA	.	.	END=3727966;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:13:0.523675:5,5:5-6,5-6:4,8,0,0:5,4:NULL:88.9008:366.612,131.36:0.605662,0.605662:0.794176,0.205873,4.81081e-08	1/0:29:0.323451:3,6:3-6,3-6:2,27,0,0:6,2:NULL:249.758:326.675,113.385:1.38061,1.03663:9.28477e-05,0.665603,0.334317
-chr1	3730566	.	ATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=3730609;RU=at;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:5:0.0242636:23,23:23-27,23-27:0,3,0,0:NULL:NULL:27.3808:366.612,131.36:1.10572,1.10572:0.0,0.0,1.0	1/1:11:0.167736:21,21:17-21,17-21:2,8,0,0:21,2:NULL:84.4048:326.675,113.385:1.1439,1.1439:0.620722,0.34227,0.0370962
-chr1	3730917	.	AAAATAAAATAAAAT	.	.	.	END=3730931;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99712:3,3:3-3,3-3:12,10,0,0:3,12:NULL:138.177:366.612,131.36:0.0,0.0:1.15463e-39,0.0017405,0.998262	0/0:24:0.999991:3,3:3-3,3-3:18,6,0,0:3,18:NULL:128.579:326.675,113.385:0.0,0.0:0.0,1.8288e-05,0.999985
-chr1	3732771	.	ACAAACAAACAAACAA	.	.	.	END=3732786;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:20,9,0,0:4,20:NULL:159.888:366.612,131.36:0.0,0.0:0.0,6.7041e-06,0.999994	0/0:52:1.0:4,4:4-4,4-4:37,12,0,3:4,37:3,3:281.16:326.675,113.385:0.0,0.0:0.0,2.69868e-11,1.0
-chr1	3733827	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=3733846;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999765:6,6:6-6,6-6:15,13,0,6:6,15:3,2|4,1|5,3:218.421:366.612,131.36:0.0,0.0:0.0,2.32535e-05,0.999979	0/0:42:1.0:5,5:5-5,5-5:20,18,0,4:5,20:3,1|4,3:274.694:326.675,113.385:0.0,0.0:0.0,4.27277e-06,0.999995
-chr1	3733847	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3733864;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999818:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.606:366.612,131.36:0.0,0.0:0.0,0.000105411,0.999895	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:221.582:326.675,113.385:0.0,0.0:0.0,4.92952e-06,0.999995
-chr1	3742835	.	ACATACATACAT	.	.	.	END=3742846;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.131:366.612,131.36:0.0,0.0:0.0,2.71881e-07,1.0	0/0:23:0.999756:3,3:3-3,3-3:15,6,0,2:3,15:2,2:128.457:326.675,113.385:0.0,0.0:0.0,0.000104244,0.999896
-chr1	3744407	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	END=3744462;RU=ggaa;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.993983:11,11:11-11,11-11:11,3,0,6:11,11:3,1|5,1|7,2|8,1|9,1:116.828:366.612,131.36:0.0,0.0:0.999066,0.000937214,5.358e-29	0/0:35:0.994739:14,14:14-14,14-14:11,13,0,11:14,11:3,1|4,2|5,1|7,2|8,2|11,1|12,2:247.076:326.675,113.385:0.0,0.0:3.08675e-25,0.00330763,0.996701
-chr1	3745050	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAG	.	.	END=3745103;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.00833439:3,3:2-5,2-5:0,11,0,0:NULL:NULL:95.702:366.612,131.36:0.85137,0.85137:0.805952,0.189878,0.00422831	0/0:28:0.811515:27,27:23-27,23-27:6,13,0,7:27,6:11,1|17,2|19,1|23,1|26,2:200.791:326.675,113.385:1.59366,1.59366:2.83126e-07,0.0964777,0.903624
-chr1	3752086	.	GTGTGTGTGTGT	.	.	.	END=3752097;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999816:6,6:6-6,6-6:16,7,0,0:6,16:NULL:130.022:366.612,131.36:0.0,0.0:2.15979e-39,0.000115849,0.999887	0/0:39:1.00001:6,6:6-6,6-6:21,15,0,2:6,21:5,2:235.47:326.675,113.385:0.139319,0.139319:0.0,2.68487e-06,1.0
-chr1	3758404	.	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	AAACAAAACAAAACAAAACAAAACAAAACAAAACA	.	.	END=3758448;RU=aaaca;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.996019:7,7:7-7,7-7:11,11,0,3:7,11:3,1|5,1|6,1:166.028:366.612,131.36:0.0,0.0:0.998838,0.00116594,1.13138e-28	0/0:28:0.99793:9,9:9-9,9-9:12,9,0,7:9,12:5,3|7,1|8,3:176.998:326.675,113.385:0.0,0.0:2.98334e-31,0.00078847,0.999217
-chr1	3765019	.	ATTTATTTATTT	.	.	.	END=3765030;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999994:3,3:3-3,3-3:19,15,0,0:3,19:NULL:207.901:366.612,131.36:0.0,0.0:0.0,1.32469e-05,0.999987	0/0:28:0.999971:3,3:3-3,3-3:18,10,0,0:3,18:NULL:156.196:326.675,113.385:0.0,0.0:0.0,2.37635e-05,0.999979
-chr1	3766121	.	ACCCACCCACCC	.	.	.	END=3766132;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.963733:3,3:3-3,3-3:7,15,0,0:3,7:NULL:162.987:366.612,131.36:0.0,0.0:4.39709e-22,0.0207749,0.979265	0/0:30:0.981572:3,3:3-3,3-3:9,21,0,0:3,9:NULL:219.913:326.675,113.385:0.0,0.0:9.73776e-28,0.0135567,0.986474
-chr1	3774612	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3774657;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.861539:19,19:18-19,18-19:13,9,0,10:18,3|19,10:7,2|10,1|13,1|14,2|15,2|17,1|18,1:225.995:366.612,131.36:0.35561,0.35561:1.0,0.0,0.0	0/2:51:0.766394:23,24:21-23,17-25:16,13,0,19:21,2|22,3|23,11:5,2|8,1|9,3|11,3|13,1|14,5|21,1|22,1|23,1|24,1:364.47:326.675,113.385:0.893506,2.31438:9.02236e-21,4.32181e-05,0.999957
-chr1	3779502	.	TTTTGTTTTTGTTTTTGT	.	.	.	END=3779519;RU=ttttgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.978872:3,3:3-3,3-3:9,9,0,0:3,9:NULL:117.204:366.612,131.36:0.0,0.0:9.67506e-30,0.0137041,0.986326	0/0:23:0.996225:3,3:3-3,3-3:11,10,0,2:3,11:2,2:146.011:326.675,113.385:0.0,0.0:4.10704e-36,0.00189986,0.998108
-chr1	3784264	.	TTTATTTATTTA	.	.	.	END=3784275;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:224.825:366.612,131.36:0.0,0.0:0.0,3.24046e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:196.026:326.675,113.385:0.0,0.0:0.0,4.68302e-07,1.0
-chr1	3785257	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3785292;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.796789:23,24:21-25,24-25:10,9,0,20:23,4|24,6:4,2|5,2|6,1|9,1|10,2|11,2|15,1|16,2|17,1|18,4|22,1|23,1:290.161:366.612,131.36:0.845709,0.242928:0.0,0.0,1.0	0/0:34:0.999161:18,18:18-18,18-18:16,9,0,7:18,16:6,2|10,1|11,2|13,1|16,1:210.872:326.675,113.385:0.0,0.0:1.9113e-20,0.000261504,0.999742
-chr1	3786174	.	TTTATTTATTTA	.	.	.	END=3786185;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:169.623:366.612,131.36:0.0,0.0:0.0,2.02586e-06,1.0	0/0:26:0.999919:3,3:3-3,3-3:17,9,0,0:3,17:NULL:151.107:326.675,113.385:0.0,0.0:0.0,6.01705e-05,0.999941
-chr1	3786490	.	TAAATAAATAAA	.	.	.	END=3786501;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:23,5,0,0:3,23:NULL:139.261:366.612,131.36:0.0,0.0:0.0,4.1567e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:185.487:326.675,113.385:0.0,0.0:0.0,1.83393e-08,1.0
-chr1	3788152	.	CATACATACATA	.	.	.	END=3788163;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999885:3,3:3-3,3-3:16,19,0,0:3,16:NULL:237.894:366.612,131.36:0.0,0.0:0.0,8.15691e-05,0.999919	0/0:33:0.999993:3,3:3-3,3-3:18,10,0,5:3,18:2,5:200.301:326.675,113.385:0.0,0.0:0.0,1.22226e-05,0.999987
-chr1	3788588	.	CTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTCTCC	.	.	.	END=3788627;RU=ctctctcc;PERIOD=8;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.645137:5,5:2-5,2-5:5,11,0,0:5,5:NULL:123.911:366.612,131.36:0.675883,0.675883:1.07449e-14,0.312121,0.68789	0/0:18:0.887773:5,5:5-5,5-5:6,9,0,3:5,6:2,1|4,2:124.338:326.675,113.385:0.29703,0.29703:5.95352e-18,0.0705128,0.929582
-chr1	3789797	.	AATAAATAAATA	.	.	.	END=3789808;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.998953:3,3:3-3,3-3:14,6,0,0:3,14:NULL:115.25:366.612,131.36:0.0,0.0:0.0,0.000634039,0.99937	0/0:21:0.999822:3,3:3-3,3-3:16,5,0,0:3,16:NULL:110.646:326.675,113.385:0.0,0.0:0.0,9.87633e-05,0.999903
-chr1	3805050	.	TTGGTTGGTTGG	TTGGTTGG	.	.	END=3805061;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0810857:2,2:1-3,1-3:0,19,0,0:NULL:NULL:190.732:366.612,131.36:0.651813,0.651813:0.251698,0.520872,0.227449	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:231.613:326.675,113.385:0.0,0.0:0.0,7.69771e-08,1.0
-chr1	3805151	.	CTGCCTCTGCCTCTGCCTCTGCCT	CTGCCT,CTGCCTCTGCCT	.	.	END=3805174;RU=ctgcct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:19:0.268599:1,2:1-2,1-2:0,19,0,0:NULL:NULL:189.234:366.612,131.36:0.573574,0.493065:0.660386,0.313909,0.0257531	0/0:40:1.0:4,4:4-4,4-4:25,12,0,3:4,25:3,3:229.306:326.675,113.385:0.0,0.0:0.0,1.29196e-07,1.0
-chr1	3805421	.	ACCCACCCACCC	.	.	.	END=3805432;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.45434:3,3:2-3,2-3:3,5,0,0:3,3:NULL:53.6259:366.612,131.36:0.222277,0.222277:2.34056e-09,0.235506,0.764519	0/0:17:0.933602:3,3:3-3,3-3:7,10,0,0:3,7:NULL:114.943:326.675,113.385:0.0,0.0:2.59369e-20,0.0362776,0.96379
-chr1	3808366	.	TTGTTTGTTTGT	.	.	.	END=3808377;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999908:3,3:3-3,3-3:17,26,0,0:3,17:NULL:306.492:366.612,131.36:0.0,0.0:0.0,7.48206e-05,0.999926	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:166.117:326.675,113.385:0.0,0.0:0.0,5.45415e-06,0.999995
-chr1	3820046	.	ATACATACATAC	.	.	.	END=3820057;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:284.425:366.612,131.36:0.0,0.0:0.0,2.20899e-07,1.0	0/0:20:0.998942:3,3:3-3,3-3:13,5,0,2:3,13:2,2:109.567:326.675,113.385:0.0,0.0:1.1e-44,0.000421401,0.999583
-chr1	3820489	.	GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	GAAGA	.	.	END=3820553;RU=gaaga;PERIOD=5;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0470469:1,1:1-3,1-3:0,12,0,0:NULL:NULL:107.696:366.612,131.36:0.738802,0.738802:0.881235,0.117651,0.00121683	0/0:20:0.495419:13,13:11-13,11-13:3,13,0,4:13,3:6,1|11,2|12,1:162.65:326.675,113.385:0.634282,0.634282:1.54106e-06,0.353491,0.646549
-chr1	3821324	.	ATGAAATGAAATGAA	.	.	.	END=3821338;RU=atgaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:193.08:366.612,131.36:0.0,0.0:0.0,2.98735e-07,1.0	0/0:30:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:162.026:326.675,113.385:0.0,0.0:0.0,2.89903e-06,1.0
-chr1	3821877	.	AATAAATAAATA	.	.	.	END=3821888;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:209.292:366.612,131.36:0.0,0.0:0.0,3.26394e-06,1.0	0/0:24:0.999983:3,3:3-3,3-3:18,6,0,0:3,18:NULL:123.511:326.675,113.385:0.0,0.0:0.0,2.01864e-05,0.99998
-chr1	3824596	.	GGGTGGGTGGGT	.	.	.	END=3824607;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.270275:3,3:3-5,3-5:2,6,0,0:3,2:NULL:60.4922:366.612,131.36:0.557805,0.557805:1.71077e-06,0.273652,0.726351	0/0:23:0.985127:3,3:3-3,3-3:9,14,0,0:3,9:NULL:164.238:326.675,113.385:0.0,0.0:2.41429e-25,0.00757214,0.992446
-chr1	3830973	.	TGGCTGGCTGGC	.	.	.	END=3830984;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999344:3,3:3-3,3-3:14,25,0,0:3,14:NULL:289.904:366.612,131.36:0.0,0.0:0.0,0.000518182,0.999484	0/0:63:1.0:3,3:3-3,3-3:38,22,0,3:3,38:2,3:370.915:326.675,113.385:0.0,0.0:0.0,1.51153e-11,1.0
-chr1	3835805	.	ACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=3835830;RU=ac;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:55:0.524651:21,21:19-24,19-24:16,17,0,20:19,3|20,2|21,9|22,2:4,1|5,1|7,1|10,3|12,1|14,3|16,3|17,1|18,4|19,1|20,1:410.769:366.612,131.36:1.4981,1.4981:0.0,0.0,1.0	0/0:44:0.990705:13,13:12-13,12-13:17,19,0,7:12,3|13,14:8,1|9,1|10,2|11,1|12,1|13,1:317.303:326.675,113.385:0.222277,0.222277:4.40569e-26,0.0089973,0.991023
-chr1	3838836	.	TTGTTTGTTTGTTTGTTTGT	TTGT	.	.	END=3838855;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0611499:1,1:1-3,1-3:0,19,0,0:NULL:NULL:176.361:366.612,131.36:0.763982,0.763982:0.495318,0.428118,0.0766308	0/0:22:0.99562:5,5:5-5,5-5:11,9,0,2:5,11:3,1|4,1:142.612:326.675,113.385:0.0,0.0:2.51935e-32,0.0024653,0.997541
-chr1	3842935	.	GTTTGTTTGTTTGTTT	GTTTGTTTGTTT	.	.	END=3842950;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.103226:3,3:1-4,1-4:0,13,0,3:NULL:2,2|3,1:139.412:366.612,131.36:0.668152,0.668152:0.265285,0.537828,0.196891	0/0:21:0.998957:4,4:4-4,4-4:13,5,0,3:4,13:2,3:122.152:326.675,113.385:0.0,0.0:1.62355e-39,0.000587118,0.999416
-chr1	3846941	.	ACCCACCCACCC	.	.	.	END=3846952;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.964559:3,3:3-3,3-3:8,7,0,0:3,8:NULL:90.4399:366.612,131.36:0.0,0.0:1.77949e-24,0.014786,0.985246	0/0:21:0.98379:3,3:3-3,3-3:9,12,0,0:3,9:NULL:143.689:326.675,113.385:0.0,0.0:3.48521e-27,0.00981038,0.990209
-chr1	3856577	.	CTTGCTTGCTTGCTTGCTTGCTTG	CTTGCTTGCTTGCTTGCTTGCTTGCTTG	.	.	END=3856600;RU=cttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.999866:7,7:7-7,7-7:16,22,0,6:7,16:3,2|4,1|6,3:304.611:366.612,131.36:0.0,0.0:0.0,1.80724e-05,0.999985	0/0:47:1.0:6,6:6-6,6-6:20,21,0,6:6,20:4,1|5,5:322.057:326.675,113.385:0.0,0.0:0.0,7.0502e-06,0.999994
-chr1	3858322	.	GGAGGGAGGGAG	.	.	.	END=3858333;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:42,12,0,2:3,42:2,2:287.409:366.612,131.36:0.0,0.0:0.0,6.46565e-13,1.0	0/0:40:1.0:3,3:3-3,3-3:28,10,0,2:3,28:2,2:214.309:326.675,113.385:0.0,0.0:0.0,1.39737e-08,1.0
-chr1	3859194	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTG	.	.	END=3859211;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:69:1.0:5,5:5-5,5-5:41,24,0,4:5,41:3,2|4,2:410.296:366.612,131.36:0.0,0.0:1.0,2.43332e-12,0.0	0/0:23:0.999991:6,6:6-6,6-6:18,3,0,2:6,18:4,1|5,1:115.133:326.675,113.385:0.0,0.0:4e-45,1.38367e-05,0.999987
-chr1	3863716	.	AATAACAATAACAATAAC	.	.	.	END=3863733;RU=aataac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:208.152:366.612,131.36:0.0,0.0:0.0,1.27778e-06,1.0	0/0:40:1.00001:3,3:3-3,3-3:21,15,0,4:3,21:2,4:248.811:326.675,113.385:0.0,0.0:0.0,2.85121e-06,1.0
-chr1	3869461	.	AAAACAAAACAAAACAAAACAAAAC	AAAAC	.	.	END=3869485;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0233967:1,1:1-2,1-2:0,7,0,0:NULL:NULL:61.8713:366.612,131.36:0.379868,0.379868:0.2013,0.56247,0.236278	0/0:40:0.999988:5,5:4-5,4-5:20,17,0,2:5,20:2,2:254.198:326.675,113.385:0.284901,0.284901:0.0,2.21254e-05,0.999979
-chr1	3870192	.	TAAATAAATAAA	.	.	.	END=3870203;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999475:3,3:3-3,3-3:14,20,0,0:3,14:NULL:237.66:366.612,131.36:0.0,0.0:0.0,0.000336171,0.999667	0/0:16:0.939518:3,3:3-3,3-3:7,9,0,0:3,7:NULL:111.194:326.675,113.385:0.0,0.0:1.192e-24,0.0342012,0.965862
-chr1	3870234	.	AAAATAAAATAAAAT	AAAATAAAAT	.	.	END=3870248;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999274:2,2:2-2,2-2:13,21,0,0:2,13:NULL:246.786:366.612,131.36:0.0,0.0:0.999607,0.000394087,3.85503e-36	0/0:14:0.945741:3,3:3-3,3-3:7,7,0,0:3,7:NULL:91.0854:326.675,113.385:0.0,0.0:1.41804e-21,0.0326951,0.967364
-chr1	3886751	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	.	END=3886794;RU=taga;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99542:11,11:10-11,10-11:12,14,0,0:11,12:NULL:180.536:366.612,131.36:0.36513,0.36513:5.1308e-32,0.00375858,0.996254	0/0:26:0.999928:11,11:11-11,11-11:17,4,0,4:11,17:3,1|5,1|9,1|10,1:141.46:326.675,113.385:0.139319,0.139319:3e-45,3.76311e-05,0.999964
-chr1	3896272	.	ACCCACCCACCC	.	.	.	END=3896283;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.683871:3,3:2-3,2-3:5,4,0,0:3,5:NULL:58.6488:366.612,131.36:0.169767,0.169767:5.75032e-15,0.148271,0.851811	0/0:46:0.997375:3,3:3-3,3-3:12,34,0,0:3,12:NULL:355.046:326.675,113.385:0.0,0.0:1.21639e-35,0.00217,0.997837
-chr1	3898788	.	TAAATAAATAAA	.	.	.	END=3898799;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:236.45:366.612,131.36:0.0,0.0:0.0,4.53293e-06,0.999995	0/0:22:0.998845:3,3:3-3,3-3:13,9,0,0:3,13:NULL:137.994:326.675,113.385:0.0,0.0:1.90907e-39,0.000696988,0.999308
-chr1	3898809	.	ATAATAATAATA	.	.	.	END=3898820;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999304:4,4:4-4,4-4:14,19,0,0:4,14:NULL:234.002:366.612,131.36:0.0,0.0:6.90189e-39,0.000574116,0.99943	0/0:14:0.843641:4,4:3-4,3-4:6,7,0,0:4,6:NULL:91.4475:326.675,113.385:0.497026,0.497026:9.08117e-17,0.0951607,0.904939
-chr1	3902855	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=3902882;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.972597:6,6:5-6,5-6:19,10,0,2:5,2|6,17:5,2:191.553:366.612,131.36:0.398507,0.398507:0.999994,8.10062e-06,9.10738e-35	0/0:32:0.999965:7,7:7-7,7-7:18,12,0,2:7,18:5,1|6,1:195.079:326.675,113.385:0.0,0.0:0.0,2.76481e-05,0.999972
-chr1	3908575	.	TGTTTTGTTTTGTTT	.	.	.	END=3908589;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:23,19,0,0:3,23:NULL:261.146:366.612,131.36:0.0,0.0:0.0,8.71967e-07,1.0	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:168.466:326.675,113.385:0.0,0.0:0.0,1.73616e-06,1.0
-chr1	3911778	.	ACAGACAGACAG	.	.	.	END=3911789;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,14,0,0:3,20:NULL:202.137:366.612,131.36:0.0,0.0:0.0,3.67449e-06,1.0	0/0:35:0.999993:3,3:3-3,3-3:19,14,0,2:3,19:2,2:218.129:326.675,113.385:0.0,0.0:0.0,1.6093e-05,0.999986
-chr1	3913472	.	CCCCACCCCCACCCCCAC	.	.	.	END=3913489;RU=ccccac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.994325:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.599:366.612,131.36:0.0,0.0:6.82753e-33,0.00376458,0.996247	0/0:17:0.799407:3,3:1-3,1-3:5,12,0,0:3,5:NULL:130.679:326.675,113.385:0.339533,0.339533:1.86304e-15,0.140504,0.85958
-chr1	3917711	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=3917748;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:18:0.889114:19,24:19-23,22-24:7,5,0,5:19,3|23,2|24,2:5,1|7,1|12,1|13,1|15,1:123.646:366.612,131.36:1.71576,0.657801:3.79657e-12,5.74102e-05,0.999942	0/0:23:0.682436:19,19:18-19,18-19:10,6,0,7:18,2|19,8:5,1|9,1|11,1|14,1|15,1|18,2:158.387:326.675,113.385:0.452422,0.452422:5.22233e-11,0.308645,0.691365
-chr1	3919065	.	TTTGTTTGTTTG	.	.	.	END=3919076;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999992:3,3:3-3,3-3:19,11,0,0:3,19:NULL:175.122:366.612,131.36:0.0,0.0:0.0,1.60593e-05,0.999986	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:218.523:326.675,113.385:0.0,0.0:0.0,1.10826e-06,1.0
-chr1	3919745	.	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTT	TATTTTATTTTATTTTATTTTATTTTATTT	.	.	END=3919794;RU=tattt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.940197:6,6:6-6,6-6:8,16,0,2:6,8:4,1|5,1:200.349:366.612,131.36:0.417958,0.417958:1.0,0.0,0.0	0/0:31:0.940551:10,10:10-10,10-10:7,12,0,12:10,7:4,5|6,4|7,1|8,1|9,1:223.928:326.675,113.385:0.0,0.0:5.12712e-19,0.0354483,0.964613
-chr1	3923978	.	TATATATATATATATA	TATATATATATATATATA	.	.	END=3923993;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.926104:9,9:7-10,7-10:8,4,0,0:9,8:NULL:67.4941:366.612,131.36:0.929323,0.929323:6.6815e-18,0.0350496,0.965016	0/0:18:0.998938:8,8:8-8,8-8:14,4,0,0:8,14:NULL:95.9206:326.675,113.385:0.0,0.0:3.50024e-20,0.000529512,0.999476
-chr1	3924698	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	END=3924742;RU=gagag;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.0643016:9,9:6-11,6-11:0,11,0,9:NULL:2,1|3,1|6,3|7,2|8,1|9,1:165.574:366.612,131.36:1.57311,1.57311:5.08532e-09,0.495721,0.504304	1/1:19:0.962867:8,8:8-8,8-8:8,8,0,3:8,8:5,1|6,1|7,1:132.604:326.675,113.385:0.0,0.0:0.985408,0.0146238,3.942e-21
-chr1	3924854	.	CTGCTGCTGCTG	.	.	.	END=3924865;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999785:4,4:4-4,4-4:16,13,0,0:4,16:NULL:184.539:366.612,131.36:0.0,0.0:0.0,0.000136256,0.999865	0/0:29:0.999959:4,4:4-4,4-4:18,11,0,0:4,18:NULL:175.104:326.675,113.385:0.0,0.0:0.0,4.83312e-05,0.999955
-chr1	3925698	.	AGAGAGAGAGAG	.	.	.	END=3925709;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:31,7,0,2:6,31:5,2:208.134:366.612,131.36:0.0,0.0:0.0,2.33183e-09,1.0	0/0:26:1.0:6,6:6-6,6-6:26,0,0,0:6,26:NULL:102.029:326.675,113.385:0.0,0.0:0.0,9.26147e-08,1.0
-chr1	3929285	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=3929312;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.99692:11,11:10-11,10-11:12,20,0,7:11,12:4,1|6,2|8,3|10,1:289.866:366.612,131.36:0.169767,0.169767:0.999713,0.000288637,6.51961e-32	0/0:41:0.19087:14,14:14-16,14-16:24,8,0,7:14,24:7,1|8,2|10,1|11,1|13,1|16,1:245.259:326.675,113.385:0.991682,0.991682:2.33484e-36,7.62607e-08,1.0
-chr1	3932876	.	AAAACAAAACAAAAC	.	.	.	END=3932890;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99924:3,3:3-3,3-3:13,14,0,0:3,13:NULL:182.319:366.612,131.36:0.0,0.0:1.5e-44,0.000526743,0.999476	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:136.58:326.675,113.385:0.0,0.0:0.0,8.88413e-06,0.999994
-chr1	3936576	.	AACAAACAAACA	.	.	.	END=3936587;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,16,0,0:3,23:NULL:233.798:366.612,131.36:0.0,0.0:0.0,1.09396e-06,1.0	0/0:23:0.999654:3,3:3-3,3-3:15,8,0,0:3,15:NULL:130.869:326.675,113.385:0.0,0.0:0.0,0.000206511,0.999796
-chr1	3943923	.	ATATATATATAT	.	.	.	END=3943934;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996744:6,6:6-6,6-6:12,17,0,0:6,12:NULL:198.475:366.612,131.36:0.0,0.0:2.90152e-22,0.00225795,0.997746	0/0:28:0.999959:6,6:6-6,6-6:18,10,0,0:6,18:NULL:165.23:326.675,113.385:0.0,0.0:1.10252e-32,4.65672e-05,0.999956
-chr1	3945858	.	AGAAAGAAAGAA	.	.	.	END=3945869;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.994776:3,3:3-3,3-3:11,13,0,0:3,11:NULL:164.432:366.612,131.36:0.0,0.0:9.3349e-38,0.00312694,0.996882	0/0:23:0.99866:3,3:3-3,3-3:13,10,0,0:3,13:NULL:144.299:326.675,113.385:0.0,0.0:1.5e-44,0.00084985,0.999156
-chr1	3949566	.	ACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=3949577;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0905103:15,15:3-15,3-15:4,18,0,0:15,4:NULL:186.702:366.612,131.36:4.19547,4.19547:0.0,0.533203,0.466901	0/0:35:0.999985:6,6:6-6,6-6:19,15,0,0:6,19:NULL:211.802:326.675,113.385:0.139319,0.139319:6e-45,2.42264e-05,0.999978
-chr1	3952215	.	AAACAAACAAACAAAC	.	.	.	END=3952230;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999761:4,4:3-4,3-4:15,20,0,4:4,15:2,2|3,2:270.441:366.612,131.36:0.345543,0.345543:0.0,0.000148609,0.999856	0/0:44:1.0:4,4:3-4,3-4:23,15,0,5:4,23:2,1|3,4:262.927:326.675,113.385:0.169767,0.169767:0.0,5.08034e-07,1.0
-chr1	3952974	.	AGACAGACAGAC	.	.	.	END=3952985;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:167.283:366.612,131.36:0.0,0.0:0.0,2.12211e-06,1.0	0/0:27:1.00001:3,3:3-3,3-3:21,4,0,2:3,21:2,2:131.297:326.675,113.385:0.0,0.0:0.0,1.24022e-06,1.0
-chr1	3955861	.	TAAATAAATAAA	.	.	.	END=3955872;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:231.683:366.612,131.36:0.0,0.0:0.0,2.6316e-07,1.0	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:147.329:326.675,113.385:0.0,0.0:0.0,4.77117e-07,1.0
-chr1	3956922	.	TAATAATAATAA	.	.	.	END=3956933;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999886:4,4:4-4,4-4:17,18,0,0:4,17:NULL:230.649:366.612,131.36:0.0,0.0:0.0,8.15416e-05,0.999919	0/0:49:1.0:4,4:4-4,4-4:31,16,0,2:4,31:3,2:286.016:326.675,113.385:0.0,0.0:0.0,2.13785e-09,1.0
-chr1	3960762	.	TGATGATGATGA	.	.	.	END=3960773;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:29,20,0,2:4,29:3,2:305.791:366.612,131.36:0.0,0.0:0.0,7.27355e-09,1.0	0/0:38:1.0:4,4:4-4,4-4:19,16,0,3:4,19:3,3:240.278:326.675,113.385:0.0,0.0:0.0,8.06454e-06,0.999994
-chr1	3967310	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=3967353;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.306429:21,25:21-21,12-25:13,0,0,9:21,11|22,2:7,1|8,1|9,1|12,1|14,1|15,1|19,1|20,1|25,1:145.172:366.612,131.36:0.139319,4.93443:7.43147e-05,0.999921,4.24387e-06	1/0:33:0.71542:21,22:19-23,21-23:8,13,0,10:21,3|22,5:6,1|11,2|12,3|15,1|17,1|18,1|21,1:236.647:326.675,113.385:1.12802,0.516942:0.000163929,0.727214,0.272628
-chr1	3969294	.	CAAACAAACAAACAAA	.	.	.	END=3969309;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:20,14,0,2:4,20:3,2:225.215:366.612,131.36:0.0,0.0:0.0,6.4141e-06,0.999995	0/0:26:0.995609:4,4:4-4,4-4:12,14,0,0:4,12:NULL:169.889:326.675,113.385:0.0,0.0:6.9e-43,0.00336124,0.996648
-chr1	3972539	.	TTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTAT	.	.	END=3972558;RU=ttat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.00001:6,6:6-6,6-6:20,14,0,5:6,20:3,1|4,1|5,3:241.788:366.612,131.36:0.0,0.0:0.0,6.07488e-07,1.0	0/0:30:0.999802:5,5:5-5,5-5:16,12,0,2:5,16:4,2:188.376:326.675,113.385:0.0,0.0:0.0,0.000120794,0.99988
-chr1	3985823	.	CACACACACACA	CA	.	.	END=3985834;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:40:1.00001:6,6:6-6,6-6:21,14,0,5:6,21:4,1|5,4:249.701:326.675,113.385:0.0,0.0:0.0,1.83576e-06,1.0
-chr1	3992697	.	GCAGAGGCAGAGGCAGAG	.	.	.	END=3992714;RU=gcagag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:25,21,0,2:3,25:2,2:304.686:366.612,131.36:0.0,0.0:0.0,1.71221e-07,1.0	0/0:28:0.999906:3,3:3-3,3-3:17,11,0,0:3,17:NULL:169.069:326.675,113.385:0.0,0.0:0.0,7.31684e-05,0.999926
-chr1	3996489	.	ACACACACACACACACACACACAC	ACACACACACACAC	.	.	END=3996512;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:1.0:7,7:7-7,7-7:20,7,0,0:7,20:NULL:142.446:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:37:0.999811:12,12:11-12,11-12:16,11,0,9:12,16:7,3|8,3|10,1|11,2:240.974:326.675,113.385:0.169767,0.169767:1.96006e-27,8.2643e-05,0.999918
-chr1	3997264	.	TTATTATTATTA	.	.	.	END=3997275;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99985:4,4:4-4,4-4:16,10,0,0:4,16:NULL:155.95:366.612,131.36:0.0,0.0:0.0,0.00010225,0.999902	0/0:17:0.979968:4,4:4-4,4-4:9,8,0,0:4,9:NULL:108.54:326.675,113.385:0.0,0.0:1.74558e-27,0.0128414,0.987186
-chr1	3997282	.	TTTATTTATTTA	.	.	.	END=3997293;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:163.036:366.612,131.36:0.0,0.0:0.0,4.92314e-06,0.999995	0/0:19:0.999445:3,3:3-3,3-3:14,5,0,0:3,14:NULL:103.056:326.675,113.385:0.0,0.0:0.0,0.00029396,0.999706
-chr1	4000875	.	ATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=4000920;RU=at;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.405946:8,8:8-8,8-8:3,2,0,0:8,3:NULL:33.0948:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/2:4:0.224362:21,21:18-21,18-21:2,2,0,0:21,2:NULL:27.9122:326.675,113.385:0.650759,0.650759:0.768271,0.231586,0.000171727
-chr1	4008030	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4008077;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.39318:21,21:19-23,19-23:10,17,0,14:19,2|21,6|22,2:5,1|6,1|8,2|10,1|11,1|12,1|15,1|18,2|19,1|20,3:320.681:366.612,131.36:1.12445,1.12445:0.997836,0.00217262,4.18948e-16	0/2:40:0.262515:24,41:24-25,24-44:10,11,0,19:23,2|24,6|25,2:4,1|6,1|7,1|11,1|13,1|14,2|16,2|17,1|18,2|19,1|21,1|22,3|23,1|41,1:316.903:326.675,113.385:0.35561,8.37565:7.71648e-11,1.76728e-05,0.999986
-chr1	4008365	.	AAGAAAGAAAGA	.	.	.	END=4008376;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,20,0,0:3,24:NULL:269.288:366.612,131.36:0.0,0.0:0.0,3.01382e-07,1.0	0/0:23:0.999946:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.165:326.675,113.385:0.0,0.0:0.0,2.00184e-05,0.99998
-chr1	4012417	.	AAAGAAAGAAAG	.	.	.	END=4012428;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999412:3,3:3-3,3-3:14,19,0,0:3,14:NULL:232.822:366.612,131.36:0.0,0.0:0.0,0.000418171,0.999583	0/0:20:0.999853:3,3:3-3,3-3:16,4,0,0:3,16:NULL:98.1249:326.675,113.385:0.0,0.0:0.0,7.07918e-05,0.999933
-chr1	4014539	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4014563;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999984:5,5:5-5,5-5:17,15,0,3:5,17:2,1|3,1|4,1:234.113:366.612,131.36:0.0,0.0:0.0,2.31096e-05,0.999979	0/0:30:0.999961:5,5:5-5,5-5:18,12,0,0:5,18:NULL:178.102:326.675,113.385:0.0,0.0:0.0,4.37563e-05,0.999957
-chr1	4019418	.	TATTTATTTATT	.	.	.	END=4019429;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:29,20,0,3:3,29:2,3:324.942:366.612,131.36:0.0,0.0:0.0,5.3575e-09,1.0	0/0:31:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:183.726:326.675,113.385:0.0,0.0:0.0,9.13158e-06,0.999993
-chr1	4036362	.	CTGGAGCTGGAGCTGGAG	.	.	.	END=4036379;RU=ctggag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:241.53:366.612,131.36:0.0,0.0:0.0,5.28407e-07,1.0	0/0:58:1.0:3,3:3-3,3-3:33,23,0,2:3,33:2,1|3,1:350.227:326.675,113.385:0.0,0.0:0.0,3.79735e-10,1.0
-chr1	4039989	.	TTGTTGTTGTTGTTG	.	.	.	END=4040003;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999953:5,5:5-5,5-5:17,11,0,4:5,17:4,3|5,1:198.973:366.612,131.36:0.0,0.0:0.0,1.54565e-05,0.999986	0/0:18:0.99925:5,5:5-5,5-5:14,4,0,0:5,14:NULL:89.9581:326.675,113.385:0.0,0.0:2.772e-42,0.000409517,0.999591
-chr1	4042319	.	CTTCTTCTTCTT	.	.	.	END=4042330;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999908:4,4:4-4,4-4:17,17,0,0:4,17:NULL:225.388:366.612,131.36:0.0,0.0:0.0,5.97355e-05,0.999941	0/0:27:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:131.321:326.675,113.385:0.0,0.0:0.0,1.48064e-06,1.0
-chr1	4043396	.	AGAAAAGAAAAGAAA	.	.	.	END=4043410;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.986364:3,3:3-3,3-3:9,8,0,0:3,9:NULL:111.117:366.612,131.36:0.0,0.0:1.46513e-23,0.00742272,0.992595	0/0:26:0.998571:3,3:3-3,3-3:12,12,0,2:3,12:2,2:163.438:326.675,113.385:0.0,0.0:5.81734e-31,0.000729566,0.999272
-chr1	4043458	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4043521;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:16:0.0474443:24,32:12-34,14-34:0,8,0,8:NULL:6,1|11,1|12,1|17,1|22,1|24,2|32,1:139.366:366.612,131.36:5.90214,4.69152:1.60462e-07,0.855372,0.144712	2/2:12:0.0103348:28,28:20-31,20-31:0,2,0,7:NULL:6,1|8,1|12,1|14,1|15,1|24,1|28,1:72.7319:326.675,113.385:5.03241,5.03241:0.48066,0.444317,0.0751495
-chr1	4048648	.	GAGTGAGTGAGT	.	.	.	END=4048659;RU=gagt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:33,25,0,0:3,33:NULL:358.07:366.612,131.36:0.0,0.0:0.0,1.58187e-09,1.0	0/0:52:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:304.176:326.675,113.385:0.0,0.0:0.0,1.0279e-09,1.0
-chr1	4048769	.	AATTAATTAATTAATTAATTAATT	.	.	.	END=4048792;RU=aatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:21,19,0,2:6,21:3,1|4,1:279.964:366.612,131.36:0.0,0.0:0.0,5.16892e-06,0.999995	0/0:34:0.998984:6,6:5-6,5-6:15,18,0,0:6,15:NULL:229.027:326.675,113.385:0.334882,0.334882:1.13576e-37,0.000935996,0.999066
-chr1	4049279	.	AAACAAACAAACAAAC	.	.	.	END=4049294;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:18,19,0,7:4,18:3,7:299.67:366.612,131.36:0.0,0.0:0.0,8.99795e-06,0.999994	0/0:40:1.0:4,4:4-4,4-4:26,14,0,0:4,26:NULL:233.691:326.675,113.385:0.0,0.0:0.0,2.26657e-07,1.0
-chr1	4055341	.	ATTATTATTATTATTATTATTATTATTATTATTATT	.	.	.	END=4055376;RU=att;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999969:12,12:12-12,12-12:18,10,0,6:12,18:7,2|10,3|11,1:213.116:366.612,131.36:0.14072,0.14072:3.86333e-28,2.54812e-05,0.999978	0/0:39:0.999999:12,12:12-12,12-12:19,12,0,8:12,19:4,2|6,1|7,1|9,1|10,1|11,2:247.211:326.675,113.385:0.0,0.0:6.52832e-30,8.2327e-06,0.999994
-chr1	4056452	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	.	END=4056505;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.17784:27,27:26-30,26-30:2,15,0,8:27,2:7,1|12,1|14,1|17,3|22,1|25,1:218.029:366.612,131.36:1.68439,1.68439:0.00145928,0.39155,0.607056	0/0:35:0.31158:27,27:23-28,23-28:3,21,0,9:27,3:7,1|10,1|16,1|17,2|21,1|23,2|27,1:279.724:326.675,113.385:2.33668,2.33668:7.22297e-12,0.453397,0.546713
-chr1	4060377	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=4060396;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.997495:6,6:6-6,6-6:12,10,0,6:6,12:4,3|5,2|6,1:184.752:366.612,131.36:0.0,0.0:0.0,0.000218626,0.999782	0/0:31:0.999979:5,5:5-5,5-5:18,10,0,3:5,18:3,2|4,1:185.131:326.675,113.385:0.0,0.0:0.0,1.62247e-05,0.999986
-chr1	4063131	.	CACACACACACACA	.	.	.	END=4063144;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:7,7:7-8,7-8:20,17,0,5:7,20:5,2|6,3:266.987:366.612,131.36:0.195027,0.195027:2.772e-42,2.99005e-06,1.0	0/0:38:1.0:7,7:7-7,7-7:24,14,0,0:7,24:NULL:227.233:326.675,113.385:0.0,0.0:0.0,4.36936e-07,1.0
-chr1	4065627	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4065661;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.00001:5,5:5-5,5-5:21,8,0,4:5,21:3,2|4,2:183.106:366.612,131.36:0.0,0.0:1.0,1.37486e-06,0.0	1/0:31:0.954031:5,7:5-7,7-7:13,10,0,8:5,2|7,11:3,2|4,1|5,1|6,4:213.486:326.675,113.385:0.985733,0.0:5.22102e-30,0.954154,0.0459211
-chr1	4065673	.	AAACAAACAAACAAAC	.	.	.	END=4065688;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:20,12,0,2:4,20:3,2:202.169:366.612,131.36:0.0,0.0:0.0,2.97336e-06,1.0	0/0:27:1.0:4,4:4-4,4-4:21,6,0,0:4,21:NULL:139.16:326.675,113.385:0.0,0.0:0.0,3.96176e-06,0.999995
-chr1	4069662	.	ATTAATTAATTAATTAATTAATTA	.	.	.	END=4069685;RU=atta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.999628:6,6:6-6,6-6:15,1,0,0:6,15:NULL:68.9845:366.612,131.36:0.0,0.0:6.7e-44,0.000183829,0.999819	0/0:10:0.748805:6,6:6-6,6-6:5,5,0,0:6,5:NULL:66.1588:326.675,113.385:0.0,0.0:4.26125e-15,0.160237,0.839837
-chr1	4070485	.	ATATATATATATAT	.	.	.	END=4070498;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.915977:7,7:7-8,7-8:16,14,0,0:7,13|8,3:NULL:199.227:366.612,131.36:0.398507,0.398507:8.33491e-19,0.000217094,0.999787	0/0:14:0.987133:7,7:7-7,7-7:10,4,0,0:7,10:NULL:76.1992:326.675,113.385:0.0,0.0:6.28506e-12,0.00772012,0.992296
-chr1	4070608	.	GTTAGTTAGTTA	.	.	.	END=4070619;RU=gtta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.416:366.612,131.36:0.0,0.0:0.0,1.74971e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:31,5,0,2:3,31:2,2:183.313:326.675,113.385:0.0,0.0:0.0,1.47285e-09,1.0
-chr1	4086252	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=4086285;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:0.99982:13,13:13-13,13-13:24,18,0,11:12,3|13,21:6,1|7,1|8,2|9,1|10,2|11,2|12,2:360.267:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/0:35:0.998783:17,17:14-17,14-17:15,8,0,10:17,15:4,1|7,3|8,1|9,3|11,1|14,1:218.492:326.675,113.385:0.970701,0.970701:2.62421e-20,0.000455687,0.999546
-chr1	4088150	.	GTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4088169;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.994246:6,6:6-6,6-6:11,14,0,7:6,11:2,1|3,3|4,1|5,2:226.958:366.612,131.36:0.0,0.0:0.0,0.000958557,0.999044	0/0:69:1.0:5,5:5-5,5-5:34,27,0,8:5,34:2,1|4,7:447.005:326.675,113.385:0.0,0.0:0.0,3.86099e-10,1.0
-chr1	4090397	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4090442;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:41:0.269344:26,34:26-27,26-37:6,17,0,17:26,4|27,2:6,1|7,1|9,2|10,1|12,1|13,1|14,2|15,1|17,1|18,1|19,1|25,3|34,1:335.572:366.612,131.36:0.478127,3.78591:2.6192e-41,8.59452e-08,1.0	1/0:35:0.726241:22,23:21-23,23-23:11,5,0,17:21,2|22,3|23,6:6,2|7,1|8,2|12,2|13,1|14,2|16,1|20,2|21,3|22,1:238.146:326.675,113.385:0.754297,0.314035:7.48832e-05,0.783309,0.216657
-chr1	4091063	.	ACAACAACAACAACA	.	.	.	END=4091077;RU=aca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999691:5,5:5-5,5-5:15,11,0,0:5,15:NULL:159.729:366.612,131.36:0.0,0.0:2.7e-44,0.000197065,0.999804	0/0:42:1.0:5,5:5-5,5-5:25,14,0,3:5,25:4,3:249.245:326.675,113.385:0.0,0.0:0.0,7.75351e-08,1.0
-chr1	4095201	.	AAGGAAGGAAGG	.	.	.	END=4095212;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:24,19,0,4:3,24:2,4:291.104:366.612,131.36:0.0,0.0:0.0,1.63943e-07,1.0	0/0:23:0.999568:3,3:3-3,3-3:14,9,0,0:3,14:NULL:136.301:326.675,113.385:0.0,0.0:0.0,0.000262446,0.999742
-chr1	4095413	.	TTTGTTTGTTTGTTTG	.	.	.	END=4095428;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:24,11,0,2:4,24:3,2:208.474:366.612,131.36:0.0,0.0:0.0,2.60547e-07,1.0	0/0:33:0.999912:4,4:4-4,4-4:16,11,0,6:4,16:3,6:204.035:326.675,113.385:0.0,0.0:0.0,3.98243e-05,0.999963
-chr1	4100799	.	ATTTTATTTTATTTTATTTTATTTTATTTT	ATTTTATTTTATTTTATTTTATTTT	.	.	END=4100828;RU=atttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:5,5:5-5,5-5:28,11,0,0:5,28:NULL:216.446:366.612,131.36:0.314035,0.314035:1.0,1.76026e-08,0.0	0/0:30:0.999887:6,6:6-7,6-7:16,9,0,4:6,16:2,1|4,1|5,2:174.799:326.675,113.385:0.284901,0.284901:1.77483e-39,5.38703e-05,0.999948
-chr1	4101417	.	TGTTGTTGTTGTTGT	.	.	.	END=4101431;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999503:5,5:5-6,5-6:14,10,0,3:5,14:3,1|4,2:168.403:366.612,131.36:0.390807,0.390807:1.25007e-37,0.000219022,0.999782	0/0:24:0.999739:5,5:5-5,5-5:15,5,0,4:5,15:3,2|4,2:132.402:326.675,113.385:0.0,0.0:2.26489e-40,9.25796e-05,0.99991
-chr1	4107366	.	TATATATATATA	TATATATA	.	.	END=4107377;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999018:4,4:4-4,4-4:14,12,0,0:4,14:NULL:169.247:366.612,131.36:0.0,0.0:0.999828,0.000172148,0.0	0/0:25:0.999995:6,6:6-6,6-6:19,5,0,0:6,19:NULL:125.715:326.675,113.385:0.139319,0.139319:1.95623e-34,1.41815e-05,0.999987
-chr1	4112131	.	GCTGCTGCTGCT	.	.	.	END=4112142;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,16,0,2:4,23:3,2:252.469:366.612,131.36:0.0,0.0:0.0,5.36964e-07,1.0	0/0:22:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:102.343:326.675,113.385:0.0,0.0:0.0,1.31815e-05,0.999987
-chr1	4114636	.	CTATCTATCTAT	.	.	.	END=4114647;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:20,14,0,4:3,20:2,4:231.282:366.612,131.36:0.0,0.0:0.0,3.55721e-06,1.0	0/0:47:1.0:3,3:3-3,3-3:27,18,0,2:3,27:2,2:283.559:326.675,113.385:0.0,0.0:0.0,3.29652e-08,1.0
-chr1	4116064	.	CTCTCTCTCTCT	CTCTCTCTCT	.	.	END=4116075;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:5,5:5-5,5-5:29,12,0,0:5,29:NULL:225.742:366.612,131.36:0.0,0.0:1.0,1.27345e-08,0.0	0/0:32:0.999995:6,6:5-6,5-6:20,11,0,0:6,20:NULL:178.829:326.675,113.385:0.236383,0.236383:0.0,1.40272e-05,0.999987
-chr1	4119174	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4119245;RU=aaag;PERIOD=4;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0352826:14,14:14-18,14-18:0,9,0,0:NULL:NULL:85.5332:366.612,131.36:0.91647,0.91647:0.411079,0.463977,0.125045	0/0:26:0.407903:18,18:15-18,15-18:4,10,0,10:18,4:3,1|4,1|5,1|9,2|10,2|13,2|16,1:184.936:326.675,113.385:1.39643,1.39643:6.16298e-09,0.46418,0.535927
-chr1	4121252	.	TGTCTGTCTGTC	.	.	.	END=4121263;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:215.764:366.612,131.36:0.0,0.0:0.0,3.36844e-06,1.0	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:347.076:326.675,113.385:0.0,0.0:0.0,5.83131e-09,1.0
-chr1	4122075	.	AAATAAATAAAT	.	.	.	END=4122086;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999747:3,3:3-3,3-3:15,19,0,0:3,15:NULL:238.814:366.612,131.36:0.0,0.0:0.0,0.000190552,0.999811	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:181.442:326.675,113.385:0.0,0.0:0.0,3.61167e-07,1.0
-chr1	4122666	.	ATCTATCTATCT	.	.	.	END=4122677;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999583:3,3:3-3,3-3:15,18,0,2:3,15:2,2:240.054:366.612,131.36:0.0,0.0:0.0,0.000271211,0.999729	0/0:44:1.0:3,3:3-3,3-3:26,14,0,4:3,26:2,4:261.757:326.675,113.385:0.0,0.0:0.0,3.76513e-08,1.0
-chr1	4123576	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=4123599;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.00001:5,5:5-5,5-5:22,14,0,6:5,22:2,1|3,2|4,3:254.229:366.612,131.36:0.0,0.0:1.0,1.48473e-06,0.0	0/0:48:1.0:6,6:6-6,6-6:25,13,0,10:6,25:2,1|3,5|4,2|5,2:286.859:326.675,113.385:0.0,0.0:0.0,9.49871e-08,1.0
-chr1	4123957	.	TCTCTCTCTCTCTC	TCTCTCTCTCTC	.	.	END=4123970;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.00002:6,6:6-13,6-13:20,9,0,0:6,20:NULL:164.174:366.612,131.36:3.50358,3.50358:0.999993,1.07436e-05,6.70284e-33	0/0:38:1.0:7,7:7-7,7-7:27,10,0,0:7,27:NULL:209.815:326.675,113.385:0.0,0.0:9.8278e-36,1.16556e-07,1.0
-chr1	4129715	.	CTTTCTTTCTTT	.	.	.	END=4129726;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.997594:3,3:3-3,3-3:12,14,0,0:3,12:NULL:170.303:366.612,131.36:0.0,0.0:2.2163e-40,0.00131315,0.998693	0/0:41:1.00001:3,3:3-3,3-3:20,16,0,5:3,20:2,5:263.411:326.675,113.385:0.0,0.0:0.0,3.28561e-06,1.0
-chr1	4129886	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4129913;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.997906:6,6:6-6,6-6:12,7,0,3:6,12:5,3:135.019:366.612,131.36:0.0,0.0:0.998541,0.00146427,3.03668e-26	0/0:59:1.0:7,7:7-7,7-7:29,19,0,10:7,29:2,2|3,3|4,1|5,1|6,3:361.213:326.675,113.385:0.0,0.0:0.0,9.64579e-09,1.0
-chr1	4129930	.	TTGTTGTTGTTG	.	.	.	END=4129941;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99999:4,4:4-4,4-4:18,9,0,2:4,18:3,2:165.39:366.612,131.36:0.0,0.0:0.0,1.34504e-05,0.999987	0/0:62:1.0:4,4:4-4,4-4:33,27,0,2:4,33:3,2:382.399:326.675,113.385:0.0,0.0:0.0,7.35907e-10,1.0
-chr1	4140418	.	TTTGTTTGTTTG	.	.	.	END=4140429;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:188.772:366.612,131.36:0.0,0.0:0.0,5.09731e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:204.552:326.675,113.385:0.0,0.0:0.0,8.95016e-06,0.999994
-chr1	4140449	.	TTTGGTTTGGTTTGG	.	.	.	END=4140463;RU=tttgg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:161.345:366.612,131.36:0.0,0.0:0.0,6.67801e-06,0.999994	0/0:28:0.999782:3,3:3-3,3-3:15,13,0,0:3,15:NULL:180.456:326.675,113.385:0.0,0.0:0.0,0.000169065,0.999834
-chr1	4142498	.	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG	.	.	END=4142575;RU=cag;PERIOD=3;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.105745:27,27:26-28,26-28:0,20,0,17:NULL:6,1|8,1|14,1|15,1|16,1|17,2|18,1|19,2|20,1|21,1|22,1|23,1|25,1|27,2:318.949:366.612,131.36:0.964013,0.964013:3.46523e-16,0.372634,0.627414	0/0:62:0.673074:26,26:25-27,25-27:4,25,0,31:26,4:4,1|5,1|6,1|7,2|8,1|9,3|10,1|11,1|12,1|13,2|14,2|15,1|17,1|18,1|19,1|20,2|21,1|22,3|23,1|24,2|25,2:482.865:326.675,113.385:0.678922,0.678922:1.65866e-07,0.112299,0.887802
-chr1	4144308	.	TTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=4144334;RU=ttg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999524:10,10:8-11,8-11:15,11,0,2:10,15:6,1|9,1:179.861:366.612,131.36:0.743036,0.743036:0.0,0.000188528,0.999812	0/0:48:1.0:9,9:9-9,9-9:28,12,0,8:9,28:3,2|5,1|6,1|7,3|8,1:286.039:326.675,113.385:0.0,0.0:0.0,1.41547e-08,1.0
-chr1	4144510	.	TTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTTTTGTT,TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	END=4144529;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:1.0:5,8:5-5,8-8:13,7,0,0:5,7|8,6:NULL:126.229:366.612,131.36:0.0,0.29703:0.0,4.58966e-24,1.0	0/0:53:0.993702:4,4:4-6,4-6:33,17,0,3:4,33:3,2|6,1:323.727:326.675,113.385:0.81164,0.81164:0.0,9.36676e-10,1.0
-chr1	4148898	.	TTTATTTTATTTTAT	.	.	.	END=4148912;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.419:366.612,131.36:0.0,0.0:0.0,6.91862e-06,0.999994	0/0:35:1.0:3,3:3-3,3-3:22,13,0,0:3,22:NULL:215.568:326.675,113.385:0.0,0.0:0.0,3.91503e-06,0.999995
-chr1	4153288	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=4153307;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.789864:5,5:5-5,5-5:5,19,0,2:5,5:3,2:210.391:366.612,131.36:0.19802,0.19802:1.59991e-17,0.15992,0.840154	0/0:45:1.00001:5,5:5-5,5-5:20,17,0,7:5,20:2,1|3,2|4,4:288.974:326.675,113.385:0.0990099,0.0990099:0.0,3.58766e-06,1.0
-chr1	4163090	.	ATTATTATTATT	.	.	.	END=4163101;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999898:4,4:4-4,4-4:16,17,0,3:4,16:3,3:235.259:366.612,131.36:0.0,0.0:0.0,4.16304e-05,0.999962	0/0:45:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:267.259:326.675,113.385:0.0,0.0:0.0,1.23235e-07,1.0
-chr1	4168643	.	TTTATTTATTTA	.	.	.	END=4168654;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:240.263:366.612,131.36:0.0,0.0:0.0,1.01644e-10,1.0	0/0:35:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:217.241:326.675,113.385:0.0,0.0:0.0,7.03676e-06,0.999994
-chr1	4173459	.	ATTTATTTATTTATTT	.	.	.	END=4173474;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:21,17,0,2:4,21:3,2:258.487:366.612,131.36:0.0,0.0:0.0,4.15327e-06,0.999995	0/0:25:0.997971:4,4:4-4,4-4:12,9,0,4:4,12:3,4:159.204:326.675,113.385:0.0,0.0:3.14464e-38,0.000692925,0.99931
-chr1	4185941	.	TTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=4185952;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.984525:4,4:4-4,4-4:9,7,0,3:4,9:2,1|3,2:127.34:366.612,131.36:0.0,0.0:0.0,0.0021856,0.997821	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:159.974:326.675,113.385:0.0,0.0:0.0,3.14951e-06,1.0
-chr1	4186148	.	TAAATAAATAAA	.	.	.	END=4186159;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.96708:3,3:3-3,3-3:8,14,0,0:3,8:NULL:160.325:366.612,131.36:0.0,0.0:3.57923e-27,0.0206187,0.979424	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:184.863:326.675,113.385:0.0,0.0:0.0,3.44099e-07,1.0
-chr1	4195196	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTG	.	.	END=4195231;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.998545:8,8:8-8,8-8:13,16,0,11:8,13:4,1|5,4|6,2|7,4:285.784:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:45:0.512226:18,18:17-18,17-18:16,12,0,16:17,4|18,12:5,3|6,1|7,1|11,3|13,2|14,1|15,2|16,3:312.952:326.675,113.385:0.489674,0.489674:1.30546e-13,0.487717,0.512341
-chr1	4196255	.	TTTGTTTGTTTG	.	.	.	END=4196266;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:2-3,2-3:29,23,0,0:3,29:NULL:332.851:366.612,131.36:0.19802,0.19802:0.0,1.48593e-08,1.0	0/0:46:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:263.701:326.675,113.385:0.0,0.0:0.0,8.27065e-09,1.0
-chr1	4199614	.	AATTAATTAATT	.	.	.	END=4199625;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.998573:3,3:3-3,3-3:13,11,0,0:3,13:NULL:150.683:366.612,131.36:0.0,0.0:2.367e-42,0.000925454,0.99908	0/0:16:0.990811:3,3:3-3,3-3:10,6,0,0:3,10:NULL:89.9067:326.675,113.385:0.0,0.0:5.26693e-33,0.00436205,0.99565
-chr1	4201150	.	TAAATAAATAAA	.	.	.	END=4201161;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.664:366.612,131.36:0.0,0.0:0.0,3.7601e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:164.257:326.675,113.385:0.0,0.0:0.0,7.31605e-08,1.0
-chr1	4201564	.	AAACAAACAAAC	.	.	.	END=4201575;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:29,24,0,0:3,29:NULL:333.733:366.612,131.36:0.0,0.0:0.0,2.26288e-08,1.0	0/0:49:1.0:3,3:3-3,3-3:30,17,0,2:3,30:2,2:288.108:326.675,113.385:0.0,0.0:0.0,4.0014e-09,1.0
-chr1	4202537	.	AAATAAATAAAT	.	.	.	END=4202548;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999995:3,3:3-3,3-3:19,16,0,0:3,19:NULL:222.381:366.612,131.36:0.0,0.0:0.0,1.16407e-05,0.999987	0/0:34:1.0:3,3:3-3,3-3:23,9,0,2:3,23:2,2:186.422:326.675,113.385:0.0,0.0:0.0,3.56569e-07,1.0
-chr1	4208149	.	AACAAACAAACA	.	.	.	END=4208160;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999617:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.19:366.612,131.36:0.0,0.0:0.0,0.000186105,0.999818	0/0:30:0.999891:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.852:326.675,113.385:0.0,0.0:0.0,6.16608e-05,0.999941
-chr1	4212306	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=4212333;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999851:5,5:5-5,5-5:16,21,0,4:5,16:2,1|3,1|4,2:287.361:366.612,131.36:0.0,0.0:0.999971,3.26505e-05,6.2e-44	0/0:30:1.0:7,7:7-7,7-7:21,9,0,0:7,21:NULL:169.604:326.675,113.385:0.0,0.0:0.0,4.44128e-06,0.999995
-chr1	4215533	.	ATACATACATACATACATACATACATACATACATAC	ATACATACATACATACATACATACATACATACATACATAC	.	.	END=4215568;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.995602:10,10:9-10,9-10:11,19,0,18:10,11:2,1|3,2|4,4|5,2|6,4|7,2|8,2|9,1:355.453:366.612,131.36:0.323567,0.323567:1.31864e-37,0.00111544,0.99889	0/0:43:0.993646:9,9:9-9,9-9:11,13,0,19:9,11:3,3|4,3|5,2|6,3|7,5|8,3:308.544:326.675,113.385:0.0,0.0:2.63742e-21,0.00276035,0.997246
-chr1	4216566	.	TGGGTGGGTGGG	.	.	.	END=4216577;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:35,22,0,0:3,35:NULL:332.45:366.612,131.36:0.0,0.0:0.0,2.70489e-10,1.0	0/0:73:1.0:3,3:3-3,3-3:41,32,0,0:3,41:NULL:443.123:326.675,113.385:0.0,0.0:0.0,3.03466e-12,1.0
-chr1	4219533	.	ACCCACCCACCC	.	.	.	END=4219544;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.935437:3,3:3-3,3-3:7,10,0,0:3,7:NULL:119.381:366.612,131.36:0.0,0.0:1.49863e-20,0.0345989,0.965464	0/0:30:0.961038:3,3:3-3,3-3:8,22,0,0:3,8:NULL:225.816:326.675,113.385:0.0,0.0:2.78787e-23,0.0278937,0.972158
-chr1	4222234	.	TGATGATGATGA	.	.	.	END=4222245;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999847:4,4:4-4,4-4:16,11,0,0:4,16:NULL:165.48:366.612,131.36:0.0,0.0:0.0,0.000104117,0.999896	0/0:45:1.00001:4,4:4-4,4-4:20,21,0,4:4,20:3,4:302.025:326.675,113.385:0.0,0.0:0.0,3.68792e-06,1.0
-chr1	4239423	.	AAACAAACAAACAAACAAAC	.	.	.	END=4239442;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:5,5:5-5,5-5:26,16,0,4:5,26:2,1|3,2|4,1:279.305:366.612,131.36:0.0,0.0:0.0,6.7303e-08,1.0	0/0:44:1.00001:5,5:5-5,5-5:22,14,0,8:5,22:2,3|3,3|4,2:271.56:326.675,113.385:0.0,0.0:0.0,6.11487e-07,1.0
-chr1	4243137	.	TCTGTCTGTCTG	.	.	.	END=4243148;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:213.688:366.612,131.36:0.0,0.0:0.0,5.45651e-07,1.0	0/0:59:1.0:3,3:3-3,3-3:29,26,0,4:3,29:2,4:378.044:326.675,113.385:0.0,0.0:0.0,7.81909e-09,1.0
-chr1	4243659	.	TTGTTGTTGTTGTTG	.	.	.	END=4243673;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:5,5:5-5,5-5:31,21,0,2:5,31:4,2:327.119:366.612,131.36:0.0,0.0:0.0,1.94798e-09,1.0	0/0:48:1.0:5,5:5-5,5-5:38,6,0,3:5,38:4,3:224.836:326.675,113.385:0.0990099,0.0990099:0.0,1.20459e-11,1.0
-chr1	4244758	.	AACAACAACAAC	.	.	.	END=4244769;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:31,16,0,3:4,31:3,3:293.809:366.612,131.36:0.0,0.0:0.0,2.75083e-09,1.0	0/0:45:1.0:4,4:4-4,4-4:27,15,0,3:4,27:3,3:266.465:326.675,113.385:0.0,0.0:0.0,4.53214e-08,1.0
-chr1	4247940	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4247969;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:1.0:11,11:11-11,11-11:31,6,0,6:10,3|11,28:7,2|8,2|10,1|11,1:236.495:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/2:48:0.301817:15,19:15-15,15-20:20,10,0,17:14,2|15,18:5,2|6,1|7,1|9,1|10,5|11,1|12,1|14,4|19,1:327.643:326.675,113.385:0.0,2.03272:2.09358e-25,5.07357e-06,0.999995
-chr1	4261751	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4261794;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.487749:8,8:6-10,6-10:4,20,0,0:8,4:NULL:198.192:366.612,131.36:1.16916,1.16916:0.958826,0.0412442,5.35052e-12	0/0:27:0.982188:11,11:11-11,11-11:8,7,0,12:11,8:2,1|3,1|5,3|7,2|8,1|10,2|11,2:184.845:326.675,113.385:0.0,0.0:2.19061e-33,0.00320668,0.9968
-chr1	4269351	.	AAATAAATAAAT	.	.	.	END=4269362;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:320.916:366.612,131.36:0.0,0.0:0.0,8.01632e-08,1.0	0/0:54:1.0:3,3:3-3,3-3:40,12,0,2:3,40:2,2:283.617:326.675,113.385:0.0,0.0:0.0,6.96112e-12,1.0
-chr1	4275434	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACA	.	.	END=4275483;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:52:0.684601:20,21:19-22,19-22:10,18,0,23:19,3|20,3|21,4:7,1|8,3|10,1|11,3|12,1|13,2|14,1|15,2|16,2|17,1|18,1|19,4|20,1:401.399:366.612,131.36:0.840244,0.766416:0.999986,1.54866e-05,5.87923e-25	0/0:47:0.855347:25,25:24-26,24-26:13,10,0,22:24,3|25,10:6,2|7,1|8,3|9,1|10,2|14,1|15,1|16,2|17,1|18,1|20,1|21,3|22,2|23,1:332.119:326.675,113.385:0.579017,0.579017:1.34034e-09,0.14187,0.858217
-chr1	4275539	.	ATAATAATAATA	.	.	.	END=4275550;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999984:4,4:4-4,4-4:19,10,0,0:4,19:NULL:165.443:366.612,131.36:0.0,0.0:0.0,2.29498e-05,0.999979	0/0:33:1.0:4,4:4-4,4-4:26,7,0,0:4,26:NULL:164.927:326.675,113.385:0.0,0.0:0.0,1.25792e-07,1.0
-chr1	4281780	.	CAAACAAACAAA	.	.	.	END=4281791;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:290.686:366.612,131.36:0.0,0.0:0.0,3.08009e-09,1.0	0/0:53:1.0:3,3:3-3,3-3:38,15,0,0:3,38:NULL:284.782:326.675,113.385:0.0,0.0:0.0,2.32525e-11,1.0
-chr1	4285029	.	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	GAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGG	.	.	END=4285113;RU=gaagg;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.0829037:17,17:5-20,5-20:0,19,0,17:NULL:4,2|5,2|6,1|7,1|10,1|12,2|14,4|15,2|17,2:296.393:366.612,131.36:3.15082,3.15082:5.1637e-16,0.546962,0.453146	1/0:31:0.99898:10,17:5-17,17-17:5,9,0,16:10,2|17,3:3,1|4,1|5,1|6,1|10,2|11,1|12,3|13,2|15,3|16,1:234.259:326.675,113.385:3.27335,0.372309:2.04025e-06,1.0,7.76487e-37
-chr1	4285247	.	GGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGGGGGAAAGGGGAAGAAAGG	.	.	.	END=4285300;RU=gggaaaggggaagaaagg;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.996535:3,3:3-3,3-3:16,21,0,0:3,16:NULL:264.925:366.612,131.36:0.278639,0.278639:3.66962e-18,0.00345612,0.996551	0/0:34:0.999955:3,3:3-3,3-3:17,14,0,3:3,17:2,1|3,2:222.686:326.675,113.385:0.0,0.0:4.41303e-37,5.37061e-05,0.999948
-chr1	4285317	.	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG,GAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG	.	.	END=4285436;RU=gaaag;PERIOD=5;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:46:0.0760872:25,25:18-26,18-26:0,20,0,26:NULL:3,1|4,3|5,1|6,2|7,2|9,2|10,2|11,1|13,1|14,2|15,1|16,1|17,1|19,1|22,1|23,3|24,1:368.821:366.612,131.36:2.10326,2.10326:4.20639e-09,0.458576,0.541533	1/1:23:0.0290068:23,23:10-24,10-24:0,7,0,16:NULL:4,2|5,1|6,2|10,3|11,1|13,1|14,1|15,2|18,1|22,1|23,1:178.687:326.675,113.385:4.1875,4.1875:0.291361,0.614,0.094706
-chr1	4287727	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4287770;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.704682:22,22:21-23,21-23:10,14,0,14:21,4|22,6:5,1|7,2|11,1|12,2|13,1|15,2|19,3|20,1|22,1:291.615:366.612,131.36:0.558156,0.558156:2.0267e-13,0.266838,0.733165	1/0:38:0.78164:20,22:20-22,22-22:8,14,0,16:20,3|22,5:5,2|8,2|9,1|10,1|11,3|13,2|16,1|18,3|21,1:296.738:326.675,113.385:0.973726,0.0990099:1.1863e-05,0.889694,0.11039
-chr1	4288691	.	TATATATATATA	TATATATATATATATA	.	.	END=4288702;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.697637:8,8:8-9,8-9:5,3,0,0:8,5:NULL:50.136:366.612,131.36:0.452422,0.452422:1.82103e-14,0.0505904,0.949488	0/0:20:0.999868:6,6:6-8,6-8:17,2,0,0:6,17:NULL:89.5175:326.675,113.385:0.390054,0.390054:6.16941e-24,6.33034e-05,0.99994
-chr1	4290243	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4290302;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:41:0.889527:16,16:11-16,11-16:7,18,0,14:16,7:2,1|4,1|5,2|6,1|7,2|8,1|11,3|12,1|15,2:307.69:366.612,131.36:2.34317,2.34317:7.37063e-31,0.0402759,0.959793	1/1:33:0.994339:14,14:13-14,13-14:11,13,0,8:14,11:3,1|5,1|7,1|9,1|11,1|12,2|13,1:230.879:326.675,113.385:0.169767,0.169767:0.99755,0.00245547,3.53208e-13
-chr1	4290307	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4290346;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.535683:19,19:18-19,18-19:10,17,0,7:18,3|19,7:7,1|10,1|11,1|13,1|16,1|17,1|18,1:269.431:366.612,131.36:0.498011,0.498011:0.980544,0.0194926,2.83766e-07	0/0:29:0.727856:20,20:18-20,18-20:5,12,0,11:20,5:7,1|9,3|10,2|12,1|16,1|17,1|19,1|20,1:224.134:326.675,113.385:0.851255,0.851255:1.73201e-15,0.0946413,0.905458
-chr1	4292154	.	TGTGTGTGTGTGTG	.	.	.	END=4292167;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999993:7,7:7-7,7-7:28,19,0,6:6,2|7,26:4,1|5,2|6,3:336.129:366.612,131.36:0.0,0.0:0.0,1.02349e-05,0.999993	0/0:35:1.00001:7,7:7-7,7-7:22,11,0,0:7,22:NULL:184.467:326.675,113.385:0.139319,0.139319:4.9e-44,2.60359e-06,1.0
-chr1	4293061	.	ATTTATTTATTT	.	.	.	END=4293072;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:3,3:3-3,3-3:21,20,0,3:3,21:2,3:284.62:366.612,131.36:0.0,0.0:0.0,1.84527e-06,1.0	0/0:25:1.00001:3,3:3-3,3-3:21,4,0,0:3,21:NULL:118.827:326.675,113.385:0.0,0.0:0.0,2.20646e-06,1.0
-chr1	4297521	.	AAATAAATAAAT	.	.	.	END=4297532;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:2-3,2-3:24,14,0,2:3,24:2,2:241.549:366.612,131.36:0.21692,0.21692:0.0,2.96497e-07,1.0	0/0:29:0.999683:3,3:3-3,3-3:14,12,0,3:3,14:2,3:188.508:326.675,113.385:0.0,0.0:0.0,0.000159458,0.999842
-chr1	4298525	.	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG	.	.	END=4298564;RU=aggg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.324771:10,11:10-12,10-12:2,14,0,8:10,2:2,1|6,1|7,1|8,1|9,2|11,2:195.225:366.612,131.36:0.91978,0.752475:2.09996e-18,0.00323195,0.996777	0/0:18:0.445983:10,10:8-10,8-10:3,9,0,5:10,3:3,1|6,1|7,1|8,1|9,1:135.037:326.675,113.385:0.963606,0.963606:8.30868e-05,0.335561,0.664371
-chr1	4303708	.	GTTTGTTTGTTT	.	.	.	END=4303719;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99999:3,3:3-3,3-3:18,8,0,0:3,18:NULL:143.671:366.612,131.36:0.0,0.0:0.0,1.81234e-05,0.999985	0/0:47:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:254.878:326.675,113.385:0.0,0.0:0.0,7.89661e-10,1.0
-chr1	4304220	.	CTTCCTTCCTTC	.	.	.	END=4304231;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:244.536:366.612,131.36:0.0,0.0:0.0,2.37142e-06,1.0	0/0:38:0.999578:3,3:2-3,2-3:14,21,0,2:3,14:2,2:262.18:326.675,113.385:0.46122,0.46122:0.0,0.000264883,0.999736
-chr1	4304531	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=4304562;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.00001:7,7:5-7,5-7:22,22,0,8:7,22:3,2|4,2|5,3|6,1:353.905:366.612,131.36:0.410384,0.410384:1.0,1.43191e-06,1.3794e-39	0/0:47:1.00001:8,8:8-8,8-8:22,16,0,9:8,22:3,1|4,1|5,1|6,1|7,5:308.08:326.675,113.385:0.0,0.0:0.0,7.07656e-07,1.0
-chr1	4305067	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4305100;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0445602:29,29:12-31,12-31:0,14,0,14:NULL:5,3|7,1|8,1|9,1|11,2|16,1|17,1|20,1|27,1|28,1|29,1:235.738:366.612,131.36:4.68217,4.68217:2.11204e-37,0.105213,0.894887	0/0:26:0.728765:17,17:16-19,16-19:5,9,0,10:17,5:7,1|9,1|12,1|13,1|15,4|16,2:182.064:326.675,113.385:1.0865,1.0865:3.43413e-08,0.073556,0.926541
-chr1	4307140	.	AATAAAATAAAATAA	.	.	.	END=4307154;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:25,18,0,2:3,25:2,2:272.688:366.612,131.36:0.0,0.0:0.0,9.41783e-08,1.0	0/0:27:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:138.153:326.675,113.385:0.0,0.0:0.0,2.24604e-06,1.0
-chr1	4307673	.	TTGTTGTTGTTG	.	.	.	END=4307684;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:231.194:366.612,131.36:0.0,0.0:0.0,1.69388e-06,1.0	0/0:40:1.0:4,4:3-4,3-4:26,13,0,0:4,26:NULL:228.879:326.675,113.385:0.195027,0.195027:0.0,1.37826e-07,1.0
-chr1	4309252	.	TTTGTTTGTTTGTTTG	.	.	.	END=4309267;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:20,16,0,3:4,20:3,3:246.126:366.612,131.36:0.0,0.0:0.0,2.00039e-06,1.0	0/0:49:1.0:4,4:4-4,4-4:35,9,0,5:4,35:2,3|3,2:261.591:326.675,113.385:0.0,0.0:0.0,1.11506e-10,1.0
-chr1	4312047	.	AATAATAATAAT	AAT	.	.	END=4312058;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0756969:1,1:1-4,1-4:0,18,0,0:NULL:NULL:166.744:366.612,131.36:1.15812,1.15812:0.566582,0.379435,0.0541254	0/0:23:0.999633:4,4:4-4,4-4:15,8,0,0:4,15:NULL:131.449:326.675,113.385:0.0,0.0:0.0,0.000241621,0.999759
-chr1	4315806	.	TTTATTTATTTA	.	.	.	END=4315817;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:18,13,0,0:3,18:NULL:189.952:366.612,131.36:0.0,0.0:0.0,1.03387e-05,0.999993	0/0:16:0.961691:3,3:3-3,3-3:8,8,0,0:3,8:NULL:104.974:326.675,113.385:0.0,0.0:2.31783e-26,0.0214061,0.978636
-chr1	4318869	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	END=4318923;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.998032:7,7:7-7,7-7:13,11,0,0:7,13:NULL:155.431:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.997389:11,11:11-11,11-11:11,11,0,11:11,11:3,1|5,1|8,1|9,3|10,5:224.136:326.675,113.385:0.0,0.0:3.92039e-33,0.00105901,0.998945
-chr1	4328602	.	GTGGGTGGGTGGGTGG	.	.	.	END=4328617;RU=gtgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:4,4:4-4,4-4:27,29,0,0:4,27:NULL:356.43:366.612,131.36:0.0,0.0:0.0,9.63734e-08,1.0	0/0:38:1.0:4,4:4-4,4-4:22,16,0,0:4,22:NULL:233.942:326.675,113.385:0.0,0.0:0.0,4.15676e-06,0.999995
-chr1	4328704	.	ATAAATAAATAA	.	.	.	END=4328715;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:36,14,0,0:3,36:NULL:264.255:366.612,131.36:0.0,0.0:0.0,1.35046e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:197.266:326.675,113.385:0.0,0.0:0.0,6.85972e-06,0.999994
-chr1	4329272	.	TGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=4329291;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.999961:5,5:5-5,5-5:17,12,0,0:5,17:NULL:178.516:366.612,131.36:0.0,0.0:0.0,3.54679e-05,0.999964	0/0:29:0.999204:4,4:3-4,3-4:13,11,0,4:4,13:3,4:178.448:326.675,113.385:0.40582,0.40582:6.01e-43,0.000413943,0.99959
-chr1	4329605	.	GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	GGAAGGGAAGGGAAGGGAAG,GGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	.	.	END=4329684;RU=ggaag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00451592:4,4:1-5,1-5:0,6,0,0:NULL:NULL:50.7807:366.612,131.36:1.38953,1.38953:0.539407,0.424989,0.0357611	2/2:1:0.000317116:17,17:17-17,17-17:0,1,0,0:NULL:NULL:8.30332:326.675,113.385:0.0,0.0:0.0516048,0.397132,0.551422
-chr1	4331004	.	AGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4331017;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0229887:22,22:21-24,21-24:0,8,0,3:NULL:6,1|8,1|20,1:96.2491:366.612,131.36:1.14911,1.14911:0.0,0.0,1.0	0/0:29:0.997633:7,7:7-8,7-8:13,15,0,0:7,13:NULL:187.971:326.675,113.385:0.437216,0.437216:1.60787e-27,0.00151059,0.998496
-chr1	4331408	.	TATTATTATTATTATTAT	TAT	.	.	END=4331425;RU=tat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0117972:1,1:1-4,1-4:0,8,0,0:NULL:NULL:78.2954:366.612,131.36:1.13848,1.13848:0.184507,0.538962,0.276614	0/0:20:0.99739:6,6:6-6,6-6:12,6,0,2:6,12:3,1|5,1:120.743:326.675,113.385:0.0,0.0:3.27621e-34,0.00136058,0.998642
-chr1	4365108	.	TCTTTCTTTCTT	.	.	.	END=4365119;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:35,23,0,0:3,35:NULL:349.875:366.612,131.36:0.0,0.0:0.0,2.82414e-10,1.0	0/0:36:1.0:3,3:3-3,3-3:20,13,0,3:3,20:2,3:223.14:326.675,113.385:0.0,0.0:0.0,5.17857e-06,0.999995
-chr1	4367608	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4367649;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:55:0.966374:21,24:20-22,24-24:23,17,0,13:20,2|21,6|22,3|23,3|24,9:6,3|9,1|12,1|16,1|18,1|19,3|20,2|21,1:391.52:366.612,131.36:0.456091,0.0990099:4.87875e-38,1.21687e-06,1.0	0/0:40:0.95915:21,21:11-21,11-21:14,8,0,16:20,3|21,11:10,1|12,1|13,1|14,1|16,2|17,2|19,5|20,3:271.685:326.675,113.385:4.35711,4.35711:1.72038e-11,0.0372044,0.962863
-chr1	4368385	.	CAAACAAACAAACAAA	.	.	.	END=4368400;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999479:4,4:4-4,4-4:14,19,0,2:4,14:3,2:242.427:366.612,131.36:0.0,0.0:0.0,0.000338708,0.999666	0/0:36:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:211.969:326.675,113.385:0.0,0.0:0.0,2.97353e-06,1.0
-chr1	4376870	.	AAATAAAATAAAATA	.	.	.	END=4376884;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999929:3,3:3-3,3-3:17,12,0,0:3,17:NULL:177.043:366.612,131.36:0.0,0.0:0.0,3.89198e-05,0.999963	0/0:16:0.930548:3,3:3-3,3-3:7,9,0,0:3,7:NULL:110.478:326.675,113.385:0.19802,0.19802:1.82652e-23,0.0449047,0.955169
-chr1	4380706	.	ATATACTATACATATACTATACATATACTATAC	ATATACTATAC	.	.	END=4380738;RU=atatactatac;PERIOD=11;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.685505:1,1:1-1,1-1:0,27,0,0:NULL:NULL:261.91:366.612,131.36:0.0,0.0:0.856769,0.140636,0.00268363	0/0:12:0.922507:3,3:3-3,3-3:7,5,0,0:3,7:NULL:74.7609:326.675,113.385:0.0,0.0:1.98248e-09,0.047239,0.952838
-chr1	4381338	.	CTTTCTTTCTTT	.	.	.	END=4381349;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99978:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.896:366.612,131.36:0.0,0.0:0.0,0.000123774,0.999879	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.07:326.675,113.385:0.0,0.0:0.0,8.56297e-08,1.0
-chr1	4383095	.	AAAATAAAATAAAATAAAAT	AAAAT	.	.	END=4383114;RU=aaaat;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0611241:1,1:1-4,1-4:0,7,0,0:NULL:NULL:62.4723:366.612,131.36:1.40706,1.40706:0.350436,0.489755,0.159858	0/0:22:0.999977:4,4:4-4,4-4:18,4,0,0:4,18:NULL:110.196:326.675,113.385:0.0,0.0:0.0,2.68047e-05,0.999972
-chr1	4388234	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=4388268;RU=ttttg;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999706:5,5:4-5,4-5:15,16,0,5:5,15:2,2|3,2|4,1:243.899:366.612,131.36:0.236383,0.236383:0.999948,5.32144e-05,3.0148e-41	0/0:31:0.99907:7,7:6-7,6-7:13,7,0,10:7,13:2,2|3,3|6,5:184.792:326.675,113.385:0.390807,0.390807:2.42909e-35,0.000341891,0.999659
-chr1	4389924	.	AAACAAACAAAC	.	.	.	END=4389935;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:20,18,0,0:3,20:NULL:238.624:366.612,131.36:0.0,0.0:0.0,3.72101e-06,1.0	0/0:26:0.999743:3,3:3-3,3-3:15,11,0,0:3,15:NULL:155.687:326.675,113.385:0.0,0.0:0.0,0.000163545,0.999841
-chr1	4390516	.	GAGAAGAGAGAAGAGAGAAGA	GAGAAGA	.	.	END=4390536;RU=gagaaga;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.112712:1,1:1-2,1-2:0,16,0,0:NULL:NULL:147.878:366.612,131.36:0.491073,0.491073:0.419702,0.473992,0.106424	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:223.091:326.675,113.385:0.0,0.0:0.0,1.10314e-07,1.0
-chr1	4391542	.	TAAATAAATAAA	.	.	.	END=4391553;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.996426:3,3:3-4,3-4:12,20,0,0:3,12:NULL:236.309:366.612,131.36:0.495841,0.495841:2.13451e-37,0.00220599,0.997799	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:223.19:326.675,113.385:0.0,0.0:0.0,5.08592e-07,1.0
-chr1	4391556	.	AACAACAACAAC	AACAACAACAACAAC	.	.	END=4391567;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.849097:5,5:4-5,4-5:17,19,0,0:4,3|5,14:NULL:257.578:366.612,131.36:0.486863,0.486863:0.0,7.64905e-05,0.999925	0/0:37:1.0:4,4:4-4,4-4:19,14,0,4:4,19:3,4:235.756:326.675,113.385:0.0,0.0:0.0,6.8877e-06,0.999994
-chr1	4394196	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=4394211;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999904:5,5:5-5,5-5:16,11,0,3:5,16:3,1|4,2:192.136:366.612,131.36:0.0,0.0:0.0,2.63456e-05,0.999978	0/0:30:1.00001:4,4:4-4,4-4:20,7,0,3:4,20:2,1|3,2:171.045:326.675,113.385:0.0,0.0:0.0,3.13178e-06,1.0
-chr1	4399750	.	GAACAGAACAGAACA	.	.	.	END=4399764;RU=gaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,16,0,0:3,23:NULL:241.427:366.612,131.36:0.0,0.0:0.0,1.09336e-06,1.0	0/0:28:0.999941:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.316:326.675,113.385:0.0,0.0:0.0,5.14948e-05,0.999949
-chr1	4404415	.	ACCACCACCACCACC	.	.	.	END=4404429;RU=acc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:22,17,0,4:5,22:3,1|4,3:280.212:366.612,131.36:0.0,0.0:0.0,2.68116e-07,1.0	0/0:35:1.00001:5,5:5-5,5-5:22,11,0,2:5,22:3,1|4,1:204.569:326.675,113.385:0.0,0.0:0.0,1.20117e-06,1.0
-chr1	4413710	.	ATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATACATAGATAC	.	.	.	END=4413789;RU=atagatac;PERIOD=8;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.166102:10,10:5-10,5-10:2,12,0,8:10,2:2,1|4,4|6,1|7,1|8,1:170.496:366.612,131.36:1.1234,1.1234:5.66557e-06,0.721365,0.27863	0/0:31:0.93962:10,10:10-10,10-10:7,8,0,16:10,7:2,1|3,2|4,1|5,2|6,2|7,4|8,3|9,1:209.782:326.675,113.385:0.0,0.0:9.99768e-20,0.0315962,0.968463
-chr1	4416214	.	AGACAGACAGAC	.	.	.	END=4416225;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.042:366.612,131.36:0.0,0.0:0.0,4.45306e-06,0.999995	0/0:44:1.00001:3,3:3-3,3-3:20,21,0,3:3,20:2,3:296.935:326.675,113.385:0.0,0.0:0.0,2.77719e-06,1.0
-chr1	4417332	.	CATGCATGCATG	.	.	.	END=4417343;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:217.251:366.612,131.36:0.0,0.0:0.0,7.47455e-06,0.999994	0/0:26:0.999984:3,3:3-3,3-3:18,8,0,0:3,18:NULL:147.202:326.675,113.385:0.0,0.0:0.0,2.16373e-05,0.999979
-chr1	4423050	.	TAATTTAATTTAATT	.	.	.	END=4423064;RU=taatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.996592:3,3:3-3,3-3:11,10,0,0:3,11:NULL:135.921:366.612,131.36:0.0,0.0:4.76551e-36,0.00230319,0.997701	0/0:14:0.981437:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.535:326.675,113.385:0.0,0.0:2.28684e-29,0.00902879,0.990993
-chr1	4423239	.	CACACACACACA	CACACACACACACA	.	.	END=4423250;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999994:7,7:7-7,7-7:19,11,0,0:7,19:NULL:174.886:366.612,131.36:0.0,0.0:0.0,8.04436e-06,0.999994	0/0:29:1.00001:6,6:6-6,6-6:23,2,0,4:6,23:5,4:138.927:326.675,113.385:0.0,0.0:0.0,3.36608e-07,1.0
-chr1	4425083	.	CCACCACCACCACCACCA	CCA	.	.	END=4425100;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.108716:1,1:1-1,1-1:0,27,0,0:NULL:NULL:244.089:366.612,131.36:0.139319,0.139319:0.66748,0.30592,0.0266397	0/0:55:1.0:6,6:6-6,6-6:29,20,0,5:6,29:5,5:334.155:326.675,113.385:0.0,0.0:0.0,6.39426e-09,1.0
-chr1	4426093	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4426130;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.271415:27,30:27-28,27-32:3,14,0,12:27,3:7,2|8,1|9,1|10,1|14,1|16,1|17,1|23,1|26,2|29,1:245.354:366.612,131.36:0.537761,1.20589:0.0,0.0,1.0	0/3:37:0.283368:19,34:19-19,19-34:15,9,0,10:18,3|19,12:8,1|12,1|13,1|15,1|16,1|18,3|19,1|32,1:249.377:326.675,113.385:0.0,6.86953:1.57146e-22,1.97878e-05,0.99998
-chr1	4426860	.	AAACAAACAAAC	.	.	.	END=4426871;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999805:3,3:3-3,3-3:15,17,0,0:3,15:NULL:216.953:366.612,131.36:0.0,0.0:0.0,8.43516e-05,0.999918	0/0:22:0.999963:3,3:3-3,3-3:17,5,0,0:3,17:NULL:118.047:326.675,113.385:0.0,0.0:0.0,3.00444e-05,0.999971
-chr1	4429409	.	CCACCACCACCA	.	.	.	END=4429420;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:30,17,0,0:4,30:NULL:267.832:366.612,131.36:0.0,0.0:0.0,8.387e-09,1.0	0/0:42:1.0:4,4:4-4,4-4:29,12,0,0:4,29:NULL:225.644:326.675,113.385:0.139319,0.139319:0.0,2.04925e-08,1.0
-chr1	4429719	.	GTGTGTGTGTGT	GTGTGTGT	.	.	END=4429730;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.990269:4,4:4-6,4-6:11,18,0,0:4,11:NULL:206.913:366.612,131.36:0.863148,0.863148:0.997246,0.00275907,6.92527e-21	0/0:25:0.999978:6,6:6-6,6-6:19,6,0,0:6,19:NULL:131.122:326.675,113.385:0.0,0.0:6.31465e-34,1.52283e-05,0.999986
-chr1	4429733	.	GAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=4429752;RU=ga;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.979729:8,8:8-8,8-8:10,13,0,0:8,10:NULL:160.169:366.612,131.36:0.139319,0.139319:0.99593,0.00407977,1.80434e-17	0/0:32:0.955031:10,10:10-11,10-11:21,8,0,3:10,18|11,3:5,1|8,1|9,1:192.258:326.675,113.385:0.412766,0.412766:3.22241e-26,5.15855e-06,0.999995
-chr1	4430764	.	ATGAATGAATGAATGAATGAATGAATGAATGA	ATGAATGAATGAATGAATGAATGAATGAATGAATGA	.	.	END=4430795;RU=atga;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999375:9,9:9-9,9-9:14,15,0,11:9,14:2,1|3,1|4,1|5,2|6,1|7,1|8,4:274.613:366.612,131.36:0.0,0.0:0.0,2.02402e-05,0.99998	0/0:31:1.0:8,8:8-8,8-8:19,6,0,6:8,19:2,1|3,1|7,4:179.494:326.675,113.385:0.0,0.0:0.0,4.54047e-06,0.999995
-chr1	4434303	.	TATATATATATA	TATATATATATATATATA,TATATATATATATATATATATATA	.	.	END=4434314;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.974761:9,12:9-13,12-12:12,13,0,0:9,2|12,10:NULL:177.35:366.612,131.36:1.49377,0.0:0.0,0.0,1.0	0/0:25:0.916793:6,6:5-7,5-7:7,14,0,2:6,7:5,2:175.812:326.675,113.385:0.531343,0.531343:4.91889e-09,0.0459664,0.954107
-chr1	4435269	.	CAATCAATCAAT	.	.	.	END=4435280;RU=caat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:228.273:366.612,131.36:0.0,0.0:0.0,4.80746e-07,1.0	0/0:32:0.999981:3,3:3-3,3-3:18,12,0,2:3,18:2,2:189.296:326.675,113.385:0.0,0.0:0.0,1.38634e-05,0.999987
-chr1	4448845	.	CTGCCTGCCTGC	.	.	.	END=4448856;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999965:3,3:3-3,3-3:17,22,0,4:3,17:2,4:297.44:366.612,131.36:0.0,0.0:0.0,1.88329e-05,0.999985	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:162.143:326.675,113.385:0.0,0.0:0.0,1.34186e-06,1.0
-chr1	4449017	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=4449072;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:51:0.914811:15,16:15-15,15-16:10,21,0,20:15,8|16,2:2,2|3,1|4,1|5,2|7,2|9,2|10,1|12,3|13,2|14,3|15,1:398.823:366.612,131.36:0.0,0.491073:0.0,4.19426e-05,0.999957	0/0:47:0.968477:14,14:11-15,11-15:8,18,0,19:14,8:2,1|3,3|4,1|6,3|7,1|8,2|9,2|10,1|12,2|13,3:341.121:326.675,113.385:1.35177,1.35177:1.51877e-16,0.0150207,0.985009
-chr1	4450115	.	ATATATATATAT	ATATATATAT	.	.	END=4450126;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:21:1.0:5,6:4-5,5-7:11,8,0,0:5,5|6,6:NULL:122.639:366.612,131.36:0.342408,0.372309:1.28879e-08,1.0,4.9555e-08	0/0:31:0.997716:6,6:5-6,5-6:13,17,0,0:6,13:NULL:201.31:326.675,113.385:0.334882,0.334882:6.22094e-24,0.00170779,0.998299
-chr1	4451210	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4451261;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:46:0.632992:22,26:22-28,26-28:15,11,0,19:21,2|22,4|24,3|26,6:6,1|8,1|9,1|11,1|12,2|14,1|18,2|19,1|20,1|21,3|22,3|23,1|28,1:360.671:366.612,131.36:2.73257,1.06305:6.07213e-07,0.865972,0.134122	0/2:45:0.887578:26,27:11-27,11-27:10,11,0,22:25,3|26,4|27,3:5,3|6,1|7,1|8,1|9,2|14,1|16,1|19,3|20,2|22,2|23,2|24,3:331.719:326.675,113.385:5.24564,6.06172:5.90559e-07,0.101421,0.898681
-chr1	4451385	.	TTGTTTTGTTTTGTT	.	.	.	END=4451399;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:21,31,0,0:3,21:NULL:354.695:366.612,131.36:0.0,0.0:0.0,5.06123e-06,0.999995	0/0:35:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.192:326.675,113.385:0.0,0.0:0.0,1.28186e-05,0.999987
-chr1	4451409	.	TCTGTCTGTCTG	.	.	.	END=4451420;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,27,0,0:3,29:NULL:353.468:366.612,131.36:0.0,0.0:0.0,2.236e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:233.131:326.675,113.385:0.0,0.0:0.0,1.73914e-07,1.0
-chr1	4453062	.	GGAGGGAGGGAG	.	.	.	END=4453073;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.998932:3,3:3-3,3-3:14,24,0,0:3,14:NULL:276.614:366.612,131.36:0.0,0.0:0.0,0.000780357,0.999225	0/0:36:1.00001:3,3:3-3,3-3:21,13,0,2:3,21:2,2:214.931:326.675,113.385:0.0,0.0:0.0,1.49998e-06,1.0
-chr1	4454884	.	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG,CCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTG	.	.	END=4454995;RU=cctgctg;PERIOD=7;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:54:0.777954:6,16:6-13,12-16:6,24,0,18:6,2|10,2|14,2:2,1|3,2|5,4|6,1|7,1|8,1|10,1|11,1|12,3|13,1|16,2:417.147:366.612,131.36:1.93807,1.59992:3.3098e-10,1.0,1.04847e-27	2/3:59:0.999114:14,19:10-16,3-21:10,21,1,24:10,3|14,3|16,4:2,2|3,3|4,1|5,1|6,1|9,1|11,2|12,2|13,1|14,5|15,4|16,1:535.961:326.675,113.385:2.21278,4.46079:0.0,1.0,2.26331e-06
-chr1	4461472	.	GAAGGGAAGGGAAGGGAAGG	GAAGG	.	.	END=4461491;RU=gaagg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.00377504:1,1:1-5,1-5:0,3,0,0:NULL:NULL:26.5218:366.612,131.36:0.780108,0.780108:0.0267453,0.388297,0.585074	0/0:40:1.0:4,4:4-4,4-4:24,13,0,3:4,24:3,3:239.676:326.675,113.385:0.0,0.0:0.0,2.98127e-07,1.0
-chr1	4462221	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4462246;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0549007:24,24:24-26,24-26:0,11,0,8:NULL:4,1|5,1|10,1|13,1|15,1|20,1|24,2:161.879:366.612,131.36:0.592738,0.592738:0.0,0.0,1.0	0/0:47:0.646146:13,13:13-17,13-17:27,12,0,8:12,2|13,23|14,2:8,1|9,2|10,2|11,1|12,1|17,1:311.76:326.675,113.385:1.82404,1.82404:2.00885e-34,2.38216e-06,1.0
-chr1	4467043	.	ATAAATAAATAA	.	.	.	END=4467054;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999958:3,3:3-3,3-3:17,21,0,2:3,17:2,2:278.905:366.612,131.36:0.0,0.0:0.0,3.44744e-05,0.999965	0/0:35:0.999996:3,3:3-3,3-3:19,16,0,0:3,19:NULL:218.454:326.675,113.385:0.0,0.0:0.0,1.14046e-05,0.999988
-chr1	4467845	.	TTGTTTGTTTGTTTGT	.	.	.	END=4467860;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.953266:4,4:4-4,4-4:7,10,0,4:4,7:3,4:149.755:366.612,131.36:0.0,0.0:5.79576e-24,0.019206,0.980836	0/0:32:0.99997:4,4:4-4,4-4:18,14,0,0:4,18:NULL:199.375:326.675,113.385:0.0,0.0:0.0,3.81478e-05,0.999964
-chr1	4468187	.	ATCATCATCATC	.	.	.	END=4468198;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:23,11,0,2:4,23:3,2:207.549:366.612,131.36:0.0,0.0:0.0,5.2263e-07,1.0	0/0:37:1.00001:4,4:4-4,4-4:22,15,0,0:4,22:NULL:227.915:326.675,113.385:0.0,0.0:0.0,3.11186e-06,1.0
-chr1	4469245	.	CACACACACACACACACA	.	.	.	END=4469262;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:9,9:9-9,9-9:26,11,0,3:9,26:7,1|8,2:236.579:366.612,131.36:0.19802,0.19802:4.37e-43,1.08494e-07,1.0	0/0:47:1.00001:9,9:9-9,9-9:21,20,0,5:9,21:5,1|6,1|8,3:310.661:326.675,113.385:0.0,0.0:3.32615e-35,1.90036e-06,1.0
-chr1	4471019	.	AGCCAGCCAGCC	.	.	.	END=4471030;RU=agcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,12,0,2:3,20:2,2:201.95:366.612,131.36:0.0,0.0:0.0,2.25541e-06,1.0	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:224.631:326.675,113.385:0.0,0.0:0.0,6.74975e-07,1.0
-chr1	4472443	.	TGTGTGTGTGTGTG	.	.	.	END=4472456;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999899:7,7:7-7,7-7:17,14,0,0:7,17:NULL:202.743:366.612,131.36:0.0,0.0:5.0226e-40,6.89604e-05,0.999933	0/0:38:1.0:7,7:7-7,7-7:23,11,0,4:7,23:5,2|6,2:226.914:326.675,113.385:0.0,0.0:0.0,3.91387e-07,1.0
-chr1	4473588	.	TTTGTTTGTTTG	.	.	.	END=4473599;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,16,0,0:3,30:NULL:267.43:366.612,131.36:0.0,0.0:0.0,8.19186e-09,1.0	0/0:45:1.0:3,3:3-3,3-3:29,13,0,3:3,29:2,3:253.947:326.675,113.385:0.0,0.0:0.0,6.24976e-09,1.0
-chr1	4475372	.	GTTGGTTGGTTG	.	.	.	END=4475383;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:0.999993:3,3:3-3,3-3:19,31,0,0:3,19:NULL:352.768:366.612,131.36:0.0,0.0:0.0,1.81628e-05,0.999985	0/0:58:1.0:3,3:3-3,3-3:24,32,0,2:3,24:2,2:399.093:326.675,113.385:0.0,0.0:0.0,6.3523e-07,1.0
-chr1	4475462	.	TGGTTGGTTGGT	.	.	.	END=4475473;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999904:3,3:3-3,3-3:17,28,0,0:3,17:NULL:328.445:366.612,131.36:0.0,0.0:0.0,9.22666e-05,0.99991	0/0:44:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:294.213:326.675,113.385:0.0,0.0:0.0,5.04333e-06,0.999995
-chr1	4476345	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	END=4476384;RU=ggaa;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999495:9,9:9-9,9-9:14,12,0,4:9,14:3,1|8,3:203.82:366.612,131.36:0.0,0.0:0.999667,0.000333038,6.32498e-26	0/0:31:0.996083:10,10:10-10,10-10:11,10,0,10:10,11:2,1|5,1|7,2|9,6:209.801:326.675,113.385:0.0,0.0:2.03327e-31,0.0011957,0.998808
-chr1	4476816	.	CCCTCCCTCCCTCCCT	CCCTCCCTCCCT	.	.	END=4476831;RU=ccct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.153545:3,3:2-4,2-4:0,21,0,3:NULL:3,3:212.852:366.612,131.36:0.46881,0.46881:0.281163,0.517279,0.201561	0/0:23:0.966917:4,4:4-4,4-4:9,14,0,0:4,9:NULL:168.071:326.675,113.385:0.0,0.0:6.6534e-14,0.0255635,0.974488
-chr1	4477626	.	TAAATAAATAAA	.	.	.	END=4477637;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:27,20,0,0:3,27:NULL:295.899:366.612,131.36:0.0,0.0:0.0,9.2065e-08,1.0	0/0:38:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:197.046:326.675,113.385:0.0,0.0:0.0,1.8844e-08,1.0
-chr1	4490091	.	AACAACAACAACAACAACAAC	.	.	.	END=4490111;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.99516:7,7:7-7,7-7:11,8,0,3:7,11:3,1|4,1|6,1:138.756:366.612,131.36:0.0,0.0:4.41312e-30,0.00219522,0.997813	0/0:25:0.999329:7,7:7-7,7-7:14,8,0,3:7,14:4,1|5,1|6,1:155.084:326.675,113.385:0.0,0.0:4.45758e-38,0.000267166,0.999735
-chr1	4491987	.	TGCTGCTGCTGC	.	.	.	END=4491998;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999887:4,4:4-4,4-4:17,20,0,0:4,17:NULL:250.469:366.612,131.36:0.0,0.0:0.0,8.49653e-05,0.999917	0/0:29:0.999976:4,4:4-4,4-4:18,11,0,0:4,18:NULL:174.657:326.675,113.385:0.0,0.0:0.0,3.28594e-05,0.99997
-chr1	4500015	.	ATAATAATAATA	.	.	.	END=4500026;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:27,28,0,0:4,27:NULL:370.374:366.612,131.36:0.0,0.0:0.0,1.39988e-07,1.0	0/0:38:1.0:4,4:4-4,4-4:23,15,0,0:4,23:NULL:226.75:326.675,113.385:0.0,0.0:0.0,2.00146e-06,1.0
-chr1	4500558	.	ACATACATACAT	.	.	.	END=4500569;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:264.928:366.612,131.36:0.0990099,0.0990099:0.0,4.35992e-10,1.0	0/0:25:0.99975:3,3:3-3,3-3:15,10,0,0:3,15:NULL:153.146:326.675,113.385:0.0,0.0:3.50738e-38,0.000171094,0.999833
-chr1	4500614	.	AATAAATAAATA	.	.	.	END=4500625;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999964:3,3:3-3,3-3:18,11,0,0:3,18:NULL:177.338:366.612,131.36:0.0,0.0:0.0,3.26547e-05,0.999971	0/0:25:0.999519:3,3:3-3,3-3:14,11,0,0:3,14:NULL:157.545:326.675,113.385:0.0,0.0:1.93e-43,0.000309201,0.999691
-chr1	4501653	.	GTAGTAGTAGTAGTA	.	.	.	END=4501667;RU=gta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:5-5,5-5:21,11,0,0:5,21:NULL:187.389:366.612,131.36:0.0,0.0:0.0,3.62527e-06,1.0	0/0:32:0.999994:5,5:4-5,4-5:19,10,0,2:5,19:4,2:184.127:326.675,113.385:0.195027,0.195027:0.0,1.32039e-05,0.999987
-chr1	4509810	.	TGTGTGTGTGTG	.	.	.	END=4509821;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.00001:6,6:6-8,6-8:42,19,0,2:6,42:5,1|7,1:373.597:366.612,131.36:0.598989,0.598989:0.0,1.67446e-12,1.0	0/0:117:1.0:6,6:6-9,6-9:100,11,0,2:4,2|6,96|7,2:5,1|7,1:542.75:326.675,113.385:0.771007,0.771007:0.0,3.3599e-26,1.0
-chr1	4510185	.	TATTTATTTATT	.	.	.	END=4510196;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:221.005:366.612,131.36:0.0,0.0:0.0,6.7528e-07,1.0	0/0:36:0.999994:3,3:3-3,3-3:19,17,0,0:3,19:NULL:222.763:326.675,113.385:0.0,0.0:0.0,1.3827e-05,0.999987
-chr1	4510496	.	GAAGAAGAAGAAGAAGAA	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=4510513;RU=gaa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0382175:14,14:13-17,13-17:0,8,0,5:NULL:8,1|10,1|11,1|14,2:113.132:366.612,131.36:1.00025,1.00025:0.0,0.0,1.0	0/0:29:1.0:6,6:6-6,6-6:20,9,0,0:6,20:NULL:161.976:326.675,113.385:0.0,0.0:0.0,8.88947e-06,0.999994
-chr1	4510513	.	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG	.	.	END=4510542;RU=agg;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0515067:12,12:12-15,12-15:0,6,0,7:NULL:4,2|7,2|10,1|11,1|12,1:110.798:366.612,131.36:1.40594,1.40594:0.0,0.0,1.0	0/0:30:0.99965:10,10:10-10,10-10:15,10,0,5:10,15:4,1|6,3|8,1:189.774:326.675,113.385:0.0,0.0:4e-45,0.000222649,0.999781
-chr1	4512324	.	AACAAAACAAAACAA	.	.	.	END=4512338;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998922:3,3:3-4,3-4:14,18,0,3:3,14:2,3:242.475:366.612,131.36:0.452422,0.452422:1e-45,0.000483448,0.999521	0/0:28:0.998154:3,3:3-4,3-4:12,13,0,2:3,12:2,2:178.278:326.675,113.385:0.484441,0.484441:1.24142e-39,0.00100998,0.998991
-chr1	4514924	.	TTGGTTGGTTGG	.	.	.	END=4514935;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999946:3,3:3-3,3-3:16,21,0,4:3,16:2,3|3,1:284.082:366.612,131.36:0.0,0.0:0.0,1.97494e-05,0.99998	0/0:37:1.0:3,3:3-3,3-3:27,8,0,2:3,27:2,2:196.928:326.675,113.385:0.0,0.0:0.0,2.16884e-08,1.0
-chr1	4515460	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4515507;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.684135:26,27:25-26,24-27:10,15,0,11:25,2|26,6|27,2:6,1|7,1|8,1|11,1|14,2|16,2|18,1|21,2:281.402:366.612,131.36:0.363246,0.786989:1.3169e-16,0.00404163,0.995968	0/0:33:0.584003:24,24:16-24,16-24:14,7,0,10:23,5|24,9:9,1|11,2|14,3|18,1|19,1|21,1|22,1:216.042:326.675,113.385:3.21674,3.21674:6.79599e-08,0.413248,0.586829
-chr1	4515925	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=4515960;RU=gttt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:1.00001:7,7:5-7,5-7:20,18,0,8:7,20:2,1|4,1|6,6:306.672:366.612,131.36:0.339533,0.339533:1.0,2.28116e-06,0.0	0/0:62:1.0:9,9:9-9,9-9:28,19,0,15:9,28:3,2|5,1|6,2|8,10:398.289:326.675,113.385:0.0,0.0:0.0,1.04606e-08,1.0
-chr1	4517194	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	END=4517241;RU=aata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.99183:11,11:11-11,11-11:11,12,0,10:11,11:3,2|4,1|5,1|6,2|7,2|8,2:228.232:366.612,131.36:0.0,0.0:0.997852,0.00215301,3.01162e-19	0/0:29:0.947807:12,12:12-12,12-12:7,12,0,10:12,7:3,1|4,1|5,1|6,2|11,5:206.508:326.675,113.385:0.0,0.0:4.58471e-16,0.0210618,0.978979
-chr1	4517464	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4517491;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.989754:19,19:19-23,19-23:15,14,0,13:18,2|19,13:5,1|6,1|8,1|10,3|12,1|13,2|15,3|16,1:305.876:366.612,131.36:1.53858,1.53858:0.0,0.0,1.0	0/0:37:0.846884:14,14:13-15,13-15:16,7,0,13:13,2|14,12|15,2:6,1|7,1|8,3|9,3|10,3|11,1|13,1:242.078:326.675,113.385:0.495247,0.495247:3.39869e-16,0.00271662,0.997291
-chr1	4519236	.	TTTTGTTTTGTTTTG	.	.	.	END=4519250;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999986:3,3:3-3,3-3:18,23,0,0:3,18:NULL:280.201:366.612,131.36:0.0,0.0:0.0,2.30958e-05,0.999979	0/0:35:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:223.843:326.675,113.385:0.0,0.0:0.0,2.45399e-05,0.999978
-chr1	4522379	.	TTTGTTTGTTTG	.	.	.	END=4522390;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.447837:3,3:1-3,1-3:3,11,0,0:3,3:NULL:106.851:366.612,131.36:0.339533,0.339533:1.14479e-10,0.29444,0.705567	0/0:22:0.995174:3,3:3-3,3-3:11,11,0,0:3,11:NULL:142.451:326.675,113.385:0.0,0.0:1.64583e-36,0.00271403,0.997292
-chr1	4527121	.	TATATATATATATATATA	.	.	.	END=4527138;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.236118:9,9:9-9,9-9:2,0,0,0:9,2:NULL:8.24721:366.612,131.36:0.0,0.0:0.000905115,0.37211,0.627037	0/0:5:0.278082:9,9:5-9,5-9:3,1,0,0:9,3:NULL:22.0666:326.675,113.385:1.79052,1.79052:5.24669e-05,0.502426,0.497538
-chr1	4527198	.	ATATATATATATATATATAT	AT	.	.	END=4527217;RU=at;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:8:0.33062:10,10:9-11,9-11:3,3,0,0:10,3:NULL:39.0087:326.675,113.385:0.741055,0.741055:5.23093e-05,0.359284,0.640709
-chr1	4528748	.	CACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=4528795;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:55:0.99964:16,16:11-16,11-16:17,20,0,17:16,17:5,1|7,2|8,3|9,1|10,2|11,2|12,3|14,1|15,2:388.295:366.612,131.36:0.848833,0.848833:1.0,0.0,0.0	0/0:33:0.9829:24,24:24-24,24-24:10,9,0,13:24,10:5,1|7,1|8,1|9,1|16,2|18,1|19,1|21,1|23,4:237.715:326.675,113.385:0.0990099,0.0990099:5.91749e-13,0.0046174,0.995394
-chr1	4529762	.	GGGTGGGTGGGT	.	.	.	END=4529773;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.870944:3,3:3-3,3-3:6,5,0,0:3,6:NULL:67.1805:366.612,131.36:0.0,0.0:2.05362e-17,0.0642545,0.935837	0/0:20:0.865018:3,3:3-3,3-3:6,14,0,0:3,6:NULL:151.244:326.675,113.385:0.19802,0.19802:2.29599e-17,0.0763372,0.92376
-chr1	4530947	.	GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	GAGG,GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	.	.	END=4531030;RU=gagg;PERIOD=4;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	2/2:3:0.0358677:9,9:7-9,7-9:0,0,0,3:NULL:7,1|8,1|9,1:21.8276:326.675,113.385:0.540307,0.540307:1.0,0.0,0.0
-chr1	4533708	.	AAACAAACAAAC	AAAC	.	.	END=4533719;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.999983:3,3:3-3,3-3:18,8,0,0:3,18:NULL:148.323:326.675,113.385:0.0,0.0:0.0,2.30936e-05,0.999979
-chr1	4536587	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4536616;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.479008:25,25:23-29,23-29:7,5,0,14:24,2|25,5:6,2|7,3|8,2|10,1|13,1|14,1|19,2|22,1|23,1:190.956:366.612,131.36:2.46314,2.46314:0.0,0.0,1.0	0/0:45:0.99191:15,15:14-16,14-16:22,15,0,8:13,2|14,2|15,16|16,2:5,1|7,2|9,1|11,2|13,1|14,1:313.078:326.675,113.385:0.409188,0.409188:8.50151e-21,0.00223313,0.997775
-chr1	4537486	.	CCCACCCACCCA	.	.	.	END=4537497;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,12,0,0:3,30:NULL:228.608:366.612,131.36:0.0,0.0:0.0,5.14401e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:28,6,0,0:3,28:NULL:165.859:326.675,113.385:0.0,0.0:0.0,1.44741e-08,1.0
-chr1	4539497	.	AAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=4539516;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.999962:5,5:4-5,4-5:18,17,0,2:5,18:2,1|3,1:242.545:366.612,131.36:0.195027,0.195027:0.0,3.80167e-05,0.999964	0/0:33:1.00001:4,4:4-4,4-4:21,8,0,4:4,21:2,1|3,3:181.496:326.675,113.385:0.0,0.0:0.0,1.42155e-06,1.0
-chr1	4540447	.	TTTATTTTATTTTAT	.	.	.	END=4540461;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.578:366.612,131.36:0.0,0.0:0.0,3.02473e-06,1.0	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:142.828:326.675,113.385:0.0,0.0:0.0,5.00032e-06,0.999995
-chr1	4542382	.	AAGAAAGAAAGA	.	.	.	END=4542393;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:142.975:366.612,131.36:0.0,0.0:0.0,1.05021e-06,1.0	0/0:16:0.995299:3,3:3-3,3-3:11,5,0,0:3,11:NULL:86.14:326.675,113.385:0.0,0.0:1.94761e-37,0.00231251,0.997693
-chr1	4543194	.	TTATTATTATTA	.	.	.	END=4543205;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999995:4,4:4-4,4-4:20,13,0,0:4,20:NULL:200.318:366.612,131.36:0.0,0.0:0.0,1.19973e-05,0.999987	0/0:24:0.999571:4,4:4-4,4-4:15,9,0,0:4,15:NULL:145.931:326.675,113.385:0.0,0.0:3.91876e-40,0.000276912,0.999727
-chr1	4544564	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4544591;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.99878:6,6:6-6,6-6:13,19,0,2:6,13:3,1|4,1:244.016:366.612,131.36:0.0,0.0:0.999628,0.000375309,2.56771e-31	0/0:24:0.994105:7,7:7-7,7-7:11,10,0,3:7,11:3,2|6,1:159.312:326.675,113.385:0.0,0.0:7.66103e-37,0.00394,0.996072
-chr1	4545765	.	ACACACACACAC	ACACACACACACACAC	.	.	END=4545776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:1.00001:8,8:8-8,8-8:20,26,0,7:8,20:5,1|6,2|7,4:381.986:366.612,131.36:0.0,0.0:0.0,7.87563e-08,1.0	0/0:54:1.0:6,6:6-6,6-6:33,18,0,3:6,33:4,1|5,2:325.214:326.675,113.385:0.0,0.0:0.0,4.0991e-10,1.0
-chr1	4547787	.	AGGAGGAGGAGG	.	.	.	END=4547798;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:28,18,0,0:4,28:NULL:285.577:366.612,131.36:0.0,0.0:0.0,7.32086e-08,1.0	0/0:37:1.0:4,4:4-4,4-4:28,9,0,0:4,28:NULL:190.861:326.675,113.385:0.0,0.0:0.0,3.96374e-08,1.0
-chr1	4556934	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT	.	.	END=4556979;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:34:0.833758:23,23:21-23,21-23:7,12,0,13:23,7:5,1|6,1|7,1|9,2|10,1|11,1|12,1|13,1|15,1|19,1|20,1|22,1:246.824:326.675,113.385:0.673849,0.673849:9.5259e-08,0.0841745,0.915921
-chr1	4566916	.	GGGTGGGTGGGT	.	.	.	END=4566927;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.567369:3,3:2-3,2-3:4,8,0,0:3,4:NULL:85.089:366.612,131.36:0.48221,0.48221:3.09765e-11,0.190045,0.810013	0/0:33:0.760216:3,3:3-3,3-3:5,28,0,0:3,5:NULL:259.804:326.675,113.385:0.0,0.0:1.50785e-13,0.153551,0.846528
-chr1	4567644	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4567655;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0338735:22,22:19-22,19-22:0,0,0,12:NULL:4,1|6,2|7,1|9,1|14,1|16,1|18,1|19,3|22,1:95.6448:366.612,131.36:1.4827,1.4827:0.0,0.000460747,0.999544	0/0:28:0.999936:6,6:6-6,6-6:17,8,0,3:6,17:4,1|5,2:171.094:326.675,113.385:0.0,0.0:1.44138e-40,3.13488e-05,0.999971
-chr1	4569841	.	TTGTTTGTTTGT	TTGTTTGTTTGTTTGT	.	.	END=4569852;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:1.00001:4,4:4-4,4-4:22,17,0,3:4,22:3,3:260.7:366.612,131.36:0.0,0.0:0.0,3.04953e-07,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:191.967:326.675,113.385:0.0,0.0:0.0,5.36049e-07,1.0
-chr1	4571456	.	AAACAAACAAAC	.	.	.	END=4571467;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999049:3,3:2-3,2-3:13,20,0,2:3,13:2,2:245.581:366.612,131.36:0.469019,0.469019:5.38e-43,0.000642941,0.999362	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:240.533:326.675,113.385:0.0,0.0:0.0,9.15509e-08,1.0
-chr1	4578817	.	ATTGCATTGCATTGC	.	.	.	END=4578831;RU=attgc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:22,16,0,0:3,22:NULL:233.183:366.612,131.36:0.0,0.0:0.0,1.90477e-06,1.0	0/0:36:1.0:3,3:2-3,2-3:23,10,0,2:3,23:2,2:194.365:326.675,113.385:0.323567,0.323567:0.0,5.35587e-07,1.0
-chr1	4579277	.	ACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=4579306;RU=ac;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:43:0.939866:18,19:18-19,19-19:9,17,0,17:18,4|19,5:4,1|7,1|8,2|9,3|11,1|12,1|13,3|14,3|15,1|18,1:339.652:366.612,131.36:0.442564,0.139319:0.0,0.0,1.0	0/0:42:0.980888:15,15:14-16,14-16:19,14,0,9:14,3|15,14|16,2:5,1|6,1|7,2|9,1|12,1|14,3:302.927:326.675,113.385:0.441011,0.441011:1.26407e-17,0.00565926,0.994354
-chr1	4580702	.	ATTTATTTATTT	ATTT	.	.	END=4580713;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.125985:1,1:1-2,1-2:0,24,0,0:NULL:NULL:234.882:366.612,131.36:0.499779,0.499779:0.445043,0.463997,0.0911081	0/0:37:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.636:326.675,113.385:0.139319,0.139319:0.0,1.64117e-07,1.0
-chr1	4581133	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4581176;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.297711:29,38:28-29,23-39:7,14,0,12:28,3|29,4:4,1|7,1|9,1|16,1|18,3|19,2|23,1|29,1|37,1:263.144:366.612,131.36:0.695188,6.28375:0.0,6.17484e-08,1.0	0/0:40:0.480372:22,22:21-22,21-22:8,13,0,19:21,3|22,5:5,3|7,1|8,1|9,1|11,1|12,1|13,4|15,1|16,1|18,1|20,2|21,1|22,1:307.642:326.675,113.385:0.492866,0.492866:1.39042e-12,0.48673,0.513336
-chr1	4581630	.	AATTAATTAATT	.	.	.	END=4581641;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:187.918:366.612,131.36:0.0,0.0:0.0,3.38291e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.98:326.675,113.385:0.0,0.0:0.0,6.67178e-07,1.0
-chr1	4599798	.	TTTGTTTTGTTTTGT	.	.	.	END=4599812;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:0.999999:3,3:3-3,3-3:20,35,0,0:3,20:NULL:397.608:366.612,131.36:0.0,0.0:0.0,1.02541e-05,0.999993	0/0:36:0.999927:3,3:3-3,3-3:17,19,0,0:3,17:NULL:237.147:326.675,113.385:0.0,0.0:0.0,6.69849e-05,0.999934
-chr1	4602828	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=4602885;RU=ct;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.0249419:24,28:7-29,13-29:0,14,0,8:NULL:9,1|11,2|13,2|16,1|24,1|28,1:190.043:366.612,131.36:6.72884,4.25337:0.29436,0.659006,0.0467059	0/0:22:0.585198:29,29:28-30,28-30:7,10,0,4:28,2|29,5:4,1|5,1|8,1|15,1:162.432:326.675,113.385:0.659736,0.659736:1.82059e-05,0.345316,0.654699
-chr1	4603083	.	CCTCCCCTCCCCTCC	.	.	.	END=4603097;RU=cctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.99967:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.501:366.612,131.36:0.0,0.0:0.0,0.000205378,0.999796	0/0:32:0.999994:3,3:3-3,3-3:19,13,0,0:3,19:NULL:188.353:326.675,113.385:0.0,0.0:0.0,1.20483e-05,0.999987
-chr1	4608057	.	GGGTGGGTGGGT	.	.	.	END=4608068;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.880045:3,3:3-3,3-3:6,17,0,0:3,6:NULL:173.037:366.612,131.36:0.0,0.0:1.75633e-18,0.0713738,0.92872	0/0:30:0.996315:3,3:3-3,3-3:11,19,0,0:3,11:NULL:212.434:326.675,113.385:0.0,0.0:8.84134e-33,0.00266666,0.997343
-chr1	4612833	.	TATTTATTTATT	.	.	.	END=4612844;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999731:3,3:3-3,3-3:15,19,0,0:3,15:NULL:237.486:366.612,131.36:0.0,0.0:0.0,0.000187178,0.999812	0/0:30:0.999638:3,3:3-3,3-3:14,14,0,2:3,14:2,2:198.623:326.675,113.385:0.0,0.0:0.0,0.000219158,0.999781
-chr1	4613348	.	AAATAAATAAATAAAT	.	.	.	END=4613363;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:25,18,0,3:4,25:2,1|3,2:288.879:366.612,131.36:0.0,0.0:0.0,1.33209e-07,1.0	0/0:40:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:250.85:326.675,113.385:0.0,0.0:0.0,2.46058e-06,1.0
-chr1	4618031	.	CTCTCTCTCTCT	.	.	.	END=4618042;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999981:6,6:6-6,6-6:18,18,0,2:6,18:5,2:248.094:366.612,131.36:0.139319,0.139319:7.7e-44,1.47598e-05,0.999987	0/0:46:1.0:6,6:6-6,6-6:34,9,0,3:6,34:4,1|5,2:244.385:326.675,113.385:0.0,0.0:0.0,2.11434e-10,1.0
-chr1	4618737	.	GTTTGTTTGTTTGTTT	.	.	.	END=4618752;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999742:4,4:4-4,4-4:16,11,0,2:4,16:2,1|3,1:178.008:366.612,131.36:0.0,0.0:0.0,0.000134948,0.999865	0/0:32:1.0:4,4:4-4,4-4:23,9,0,0:4,23:NULL:176.817:326.675,113.385:0.0,0.0:0.0,8.71602e-07,1.0
-chr1	4619846	.	ACCACCACCACC	.	.	.	END=4619857;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999951:4,4:4-4,4-4:17,13,0,2:4,17:3,2:207.956:366.612,131.36:0.0,0.0:0.0,2.92333e-05,0.999971	0/0:32:0.999638:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.883:326.675,113.385:0.0,0.0:0.0,0.000296661,0.999705
-chr1	4619861	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	.	END=4619904;RU=tcca;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999879:11,11:11-11,11-11:17,12,0,0:11,17:NULL:190.814:366.612,131.36:0.0,0.0:8.87201e-36,8.94935e-05,0.999911	0/0:44:0.987388:11,11:10-11,10-11:9,19,0,15:11,9:3,2|4,1|5,1|6,1|7,2|8,4|9,2|10,2:319.568:326.675,113.385:0.45695,0.45695:4.95012e-19,0.00840036,0.991621
-chr1	4620573	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4620612;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.98897:22,22:22-23,22-23:11,14,0,17:22,11:9,1|10,2|11,1|12,2|13,1|14,1|15,1|16,4|21,4:323.128:366.612,131.36:0.253975,0.253975:0.0,0.00022719,0.999774	0/0:57:0.840529:20,20:19-20,19-20:21,24,0,11:19,6|20,15:6,2|9,1|10,1|11,1|12,1|15,2|16,1|19,2:414.162:326.675,113.385:0.382696,0.382696:1.23218e-12,0.15951,0.840564
-chr1	4621359	.	TTTTTTCTTTTTTCTTTTTTC	.	.	.	END=4621379;RU=ttttttc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998551:3,3:3-3,3-3:12,16,0,2:3,12:2,2:211.688:366.612,131.36:0.0,0.0:2.06014e-39,0.000943101,0.999059	0/0:45:1.0:3,3:3-3,3-3:24,21,0,0:3,24:NULL:289.748:326.675,113.385:0.0,0.0:0.0,8.82954e-07,1.0
-chr1	4624755	.	AGGCAGAGGCAGAGGCAGAGGCAG	.	.	.	END=4624778;RU=aggcag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99884:4,4:4-4,4-4:13,12,0,2:4,13:3,2:181.288:366.612,131.36:0.0,0.0:3.828e-42,0.000638048,0.999363	0/0:54:1.0:4,4:4-4,4-4:31,18,0,5:4,31:3,5:319.943:326.675,113.385:0.0,0.0:0.0,2.05728e-09,1.0
-chr1	4625336	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4625385;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.30768:29,30:10-30,10-31:3,9,0,3:29,3:13,1|23,1|30,1:126.424:366.612,131.36:8.90044,9.91346:4.7859e-17,0.126138,0.873959	0/0:25:0.745876:25,25:24-25,24-25:6,10,0,8:25,6:11,1|15,1|16,1|17,1|20,1|23,2|24,1:182.304:326.675,113.385:0.21692,0.21692:3.33279e-08,0.0666003,0.933493
-chr1	4626527	.	TTTGTTTGTTTG	.	.	.	END=4626538;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999129:3,3:3-3,3-3:13,14,0,2:3,13:2,2:191.306:366.612,131.36:0.0,0.0:1.39e-43,0.000304124,0.999697	0/0:30:0.999991:3,3:3-3,3-3:18,10,0,2:3,18:2,2:179.203:326.675,113.385:0.0,0.0:0.0,1.23552e-05,0.999987
-chr1	4626573	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=4626592;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:21,11,0,2:4,21:3,2:196.993:366.612,131.36:0.0,0.0:0.0,1.43994e-06,1.0	0/0:26:0.999967:4,4:4-4,4-4:18,8,0,0:4,18:NULL:147.753:326.675,113.385:0.0,0.0:0.0,4.01851e-05,0.999963
-chr1	4626799	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4626850;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:43:0.702903:25,26:25-26,23-26:5,23,0,15:25,3|26,2:5,1|6,1|7,1|8,1|9,1|13,1|15,2|17,1|18,2|21,1|22,2|25,1:367.648:366.612,131.36:0.569802,0.727436:0.0451303,0.841871,0.113169	1/0:45:0.678:24,26:23-28,26-28:12,14,0,17:23,3|24,2|25,2|26,5:6,1|7,1|10,1|11,1|12,2|14,1|15,2|16,3|17,1|18,1|22,1|24,2:328.255:326.675,113.385:1.38175,0.586754:0.000234479,0.977781,0.0220282
-chr1	4629230	.	AGAGAGAGAGAGAG	.	.	.	END=4629243;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:7,7:7-7,7-7:29,34,0,4:7,29:4,1|5,1|6,2:454.035:366.612,131.36:0.0,0.0:0.0,5.7408e-09,1.0	0/0:66:1.0:7,7:7-7,7-7:40,24,0,2:7,40:4,1|5,1:392.862:326.675,113.385:0.0,0.0:0.0,9.17971e-12,1.0
-chr1	4629974	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4630023;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.870331:23,23:23-25,23-25:10,16,0,3:22,2|23,8:14,1|16,1|19,1:227.158:366.612,131.36:0.767183,0.767183:0.995297,0.00471319,2.52889e-12	2/0:43:0.776363:24,25:12-25,12-25:9,23,0,10:24,4|25,5:5,1|8,1|9,1|11,1|15,1|16,2|17,1|18,1|21,1:325.245:326.675,113.385:5.93518,6.46133:0.000205716,0.786996,0.212843
-chr1	4631170	.	AAGGACAAAGGACAAAGGACA	.	.	.	END=4631190;RU=aaggaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,14,0,2:3,20:2,2:221.92:366.612,131.36:0.0,0.0:0.0,4.45143e-06,0.999995	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.712:326.675,113.385:0.0,0.0:0.0,5.48697e-06,0.999995
-chr1	4637541	.	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	AAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAG	.	.	END=4637620;RU=aagag;PERIOD=5;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:57:0.997026:15,16:15-16,15-16:5,29,0,23:15,2|16,3:2,1|3,3|4,1|5,2|6,2|7,3|8,3|9,1|13,1|14,3|15,3:458.031:366.612,131.36:0.298675,0.21692:5.33947e-07,0.997066,0.00294373	1/1:37:0.666402:15,15:7-15,7-15:4,13,0,19:15,4:4,4|6,3|7,2|8,2|10,1|12,3|13,2|14,2:271.649:326.675,113.385:3.85559,3.85559:0.86852,0.131573,2.53072e-08
-chr1	4637824	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4637855;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.995618:20,20:20-20,20-20:13,8,0,11:20,13:5,1|6,2|7,1|8,1|10,1|14,2|16,1|18,1|19,1:218.423:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:33:0.641168:16,16:15-17,15-17:13,13,0,6:15,4|16,9:6,1|9,1|10,2|15,2:236.615:326.675,113.385:0.609213,0.609213:1.13819e-09,0.357257,0.64279
-chr1	4639717	.	ATTTATTTATTTATTT	.	.	.	END=4639732;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:29,12,0,6:4,29:3,6:267.88:366.612,131.36:0.0,0.0:0.0,5.25643e-09,1.0	0/0:34:1.0:4,4:4-4,4-4:25,7,0,2:4,25:3,2:184.06:326.675,113.385:0.0,0.0:0.0,1.53537e-07,1.0
-chr1	4642589	.	CTTTCTTTCTTT	.	.	.	END=4642600;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:24,17,0,2:3,24:2,2:268.451:366.612,131.36:0.0,0.0:0.0,1.27997e-07,1.0	0/0:43:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:275.826:326.675,113.385:0.0,0.0:0.0,8.98022e-07,1.0
-chr1	4643335	.	AAGGAAGGAAGG	.	.	.	END=4643346;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,8,0,4:3,30:2,4:221.947:366.612,131.36:0.0,0.0:0.0,1.92521e-09,1.0	0/0:49:1.0:3,3:3-3,3-3:29,17,0,3:3,29:2,3:290.615:326.675,113.385:0.0,0.0:0.0,9.02746e-09,1.0
-chr1	4648909	.	TTGTTTTGTTTTGTT	.	.	.	END=4648923;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.459673:3,3:1-3,1-3:3,19,0,0:3,3:NULL:180.672:366.612,131.36:0.508722,0.508722:2.71995e-10,0.425296,0.574792	0/0:23:0.912248:3,3:3-3,3-3:7,16,0,0:3,7:NULL:178.273:326.675,113.385:0.0,0.0:9.71457e-23,0.070973,0.929121
-chr1	4653049	.	TTTCTTTCTTTC	.	.	.	END=4653060;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:166.14:366.612,131.36:0.0,0.0:0.0,1.51626e-06,1.0	0/0:21:0.999371:3,3:3-3,3-3:14,7,0,0:3,14:NULL:119.355:326.675,113.385:0.0,0.0:0.0,0.000334464,0.999667
-chr1	4653751	.	AAAACAAAAACAAAAACA	.	.	.	END=4653768;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999993:3,3:1-3,1-3:21,21,0,0:3,21:NULL:274.047:366.612,131.36:0.863148,0.863148:0.0,1.14986e-05,0.999988	0/0:36:0.999992:3,3:3-3,3-3:18,16,0,2:3,18:2,2:230.727:326.675,113.385:0.0,0.0:0.0,1.67796e-05,0.999986
-chr1	4654599	.	GTTGGTTGGTTG	GTTGGTTGGTTGGTTG	.	.	END=4654610;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999927:4,4:3-4,3-4:17,16,0,0:4,17:NULL:216.93:366.612,131.36:0.270063,0.270063:0.0,3.87117e-05,0.999963	0/0:25:0.999943:3,3:3-3,3-3:17,8,0,0:3,17:NULL:139.825:326.675,113.385:0.0,0.0:0.0,3.49385e-05,0.999964
-chr1	4655498	.	TGTGTGTGTGTG	TGTGTGTGTG	.	.	END=4655509;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999717:5,5:4-5,4-5:16,25,0,0:5,16:NULL:286.158:366.612,131.36:0.334882,0.334882:0.999949,5.08902e-05,1.01e-43	0/0:35:0.999992:6,6:6-6,6-6:19,16,0,0:6,19:NULL:220.995:326.675,113.385:0.0,0.0:2.6249e-41,1.50959e-05,0.999986
-chr1	4661585	.	ACAACAACAACA	.	.	.	END=4661596;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:21,13,0,2:4,21:3,2:219.982:366.612,131.36:0.0,0.0:0.0,3.05948e-06,1.0	0/0:28:0.999994:4,4:4-4,4-4:19,9,0,0:4,19:NULL:163.593:326.675,113.385:0.0,0.0:0.0,1.5113e-05,0.999986
-chr1	4661836	.	GTGGGTGGGTGG	.	.	.	END=4661847;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999839:3,3:3-3,3-3:16,13,0,0:3,16:NULL:182.229:366.612,131.36:0.0,0.0:0.0,9.61132e-05,0.999904	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:189.198:326.675,113.385:0.0,0.0:0.0,3.92993e-07,1.0
-chr1	4663912	.	AATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATA	.	.	END=4663943;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.997908:6,6:6-6,6-6:13,13,0,0:6,13:NULL:175.356:366.612,131.36:0.0,0.0:0.999734,0.000269517,6.86485e-36	0/0:21:0.992977:8,8:8-8,8-8:10,6,0,5:8,10:3,1|4,1|5,1|6,1|7,1:132.276:326.675,113.385:0.0,0.0:1.45405e-32,0.0035816,0.996428
-chr1	4664837	.	GTTTGTTTGTTTGTTT	.	.	.	END=4664852;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:21,15,0,2:4,21:2,1|3,1:230.746:366.612,131.36:0.0,0.0:0.0,1.93539e-06,1.0	0/0:30:0.999068:4,4:2-4,2-4:14,15,0,0:4,14:NULL:192.754:326.675,113.385:0.997595,0.997595:4.60983e-38,0.000776317,0.999226
-chr1	4666307	.	AAACAAACAAACAAACAAAC	.	.	.	END=4666326;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999992:5,5:5-5,5-5:18,21,0,5:5,18:3,1|4,4:300.251:366.612,131.36:0.0,0.0:0.0,1.29769e-05,0.999987	0/0:39:1.00001:5,5:5-5,5-5:22,12,0,5:5,22:2,2|3,1|4,2:233.656:326.675,113.385:0.0,0.0:0.0,8.89071e-07,1.0
-chr1	4666832	.	TAAATAAATAAA	.	.	.	END=4666843;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:20,16,0,3:3,20:2,3:241.532:366.612,131.36:0.0,0.0:0.0,2.62971e-06,1.0	0/0:25:0.998541:3,3:3-3,3-3:12,10,0,3:3,12:2,3:161.795:326.675,113.385:0.0,0.0:5.2568e-41,0.00054033,0.999462
-chr1	4675038	.	AAAACAAAACAAAAC	.	.	.	END=4675052;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:3,3:3-3,3-3:38,26,0,0:3,38:NULL:382.892:366.612,131.36:0.0,0.0:0.0,3.33165e-11,1.0	0/0:50:1.0:3,3:3-3,3-3:34,14,0,2:3,34:2,2:279.961:326.675,113.385:0.0,0.0:0.0,2.22486e-10,1.0
-chr1	4675154	.	ATAAATAAATAA	.	.	.	END=4675165;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:19,26,0,2:3,19:2,2:322.023:366.612,131.36:0.0,0.0:0.0,8.43525e-06,0.999994	0/0:48:1.0:3,3:3-3,3-3:31,17,0,0:3,31:NULL:279.737:326.675,113.385:0.0,0.0:0.0,2.42215e-09,1.0
-chr1	4678790	.	AGTGAGTGAGTG	.	.	.	END=4678801;RU=agtg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.99837:3,3:3-3,3-3:13,8,0,0:3,13:NULL:127.939:366.612,131.36:0.0,0.0:8.83e-43,0.000853769,0.99915	0/0:30:0.999849:3,3:3-3,3-3:16,14,0,0:3,16:NULL:198.303:326.675,113.385:0.0,0.0:0.0,0.00010299,0.999896
-chr1	4678965	.	ACAGACAGACAG	.	.	.	END=4678976;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.558221:3,3:2-3,2-3:4,11,0,0:3,4:NULL:114.069:366.612,131.36:0.169767,0.169767:6.68288e-13,0.253675,0.746332	0/0:22:0.998838:3,3:3-3,3-3:13,9,0,0:3,13:NULL:138.47:326.675,113.385:0.0,0.0:1.0019e-41,0.000656811,0.999347
-chr1	4682367	.	TGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGT	.	.	END=4682390;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:1.0:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.642:366.612,131.36:0.0,0.0:1.0,1.95473e-06,0.0	0/0:25:0.999871:8,8:8-8,8-8:16,4,0,5:8,16:3,1|6,2|7,2:137.885:326.675,113.385:0.0,0.0:4.181e-42,4.04716e-05,0.999963
-chr1	4686168	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4686209;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.187797:22,22:22-24,22-24:2,10,0,11:22,2:5,1|6,1|8,1|10,1|11,1|12,2|14,1|15,2|17,1:189.185:366.612,131.36:0.74264,0.74264:0.00012952,0.20116,0.798757	0/0:32:0.914242:21,21:20-22,20-22:8,7,0,15:21,8:5,2|6,1|7,1|9,3|10,2|13,1|14,1|15,1|16,1|17,2:218.165:326.675,113.385:0.43744,0.43744:1.32364e-09,0.0367255,0.963338
-chr1	4686524	.	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=4686563;RU=attt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.151438:7,7:7-10,7-10:0,28,0,0:NULL:NULL:276.397:366.612,131.36:1.35046,1.35046:0.470992,0.446304,0.0828489	0/0:29:0.947364:10,10:10-10,10-10:7,12,0,10:10,7:4,1|5,5|7,1|8,1|9,2:216.363:326.675,113.385:0.0,0.0:6.04772e-18,0.0269432,0.973108
-chr1	4686877	.	CTCTTGCCTCTTGCCTCTTGC	CTCTTGCCTCTTGC	.	.	END=4686897;RU=ctcttgc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:1.00001:2,2:2-2,2-2:20,2,0,0:2,20:NULL:101.017:366.612,131.36:0.0,0.0:0.999994,6.05004e-06,0.0	0/0:29:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:171.243:326.675,113.385:0.0,0.0:0.0,1.90551e-05,0.999985
-chr1	4686995	.	CAACCAACCAAC	.	.	.	END=4687006;RU=caac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999964:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.776:366.612,131.36:0.0,0.0:0.0,2.7351e-05,0.999972	0/0:31:1.00001:3,3:3-3,3-3:22,7,0,2:3,22:2,2:165.401:326.675,113.385:0.0,0.0:0.0,6.19326e-07,1.0
-chr1	4687079	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=4687118;RU=tttg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.97354:9,9:9-9,9-9:9,9,0,2:9,9:4,1|6,1:135.748:366.612,131.36:0.0,0.0:0.992191,0.00782769,1.51507e-15	0/0:31:0.999473:10,10:10-10,10-10:14,9,0,8:10,14:3,2|4,1|5,2|6,1|8,1|9,1:196.508:326.675,113.385:0.0,0.0:4.71767e-36,0.000248488,0.999751
-chr1	4689281	.	CCGCCGCCGCCG	.	.	.	END=4689292;RU=ccg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:244.472:366.612,131.36:0.0,0.0:0.0,7.97427e-09,1.0	0/0:55:1.0:4,4:4-4,4-4:36,19,0,0:4,36:NULL:318.93:326.675,113.385:0.0,0.0:0.0,2.99631e-10,1.0
-chr1	4689823	.	AAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=4689834;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.570554:4,4:1-4,1-4:4,18,0,0:4,4:NULL:181.263:366.612,131.36:0.896026,0.896026:5.26906e-18,0.295691,0.704315	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:157.83:326.675,113.385:0.0,0.0:0.0,3.10126e-06,1.0
-chr1	4697276	.	CACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=4697299;RU=ca;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.99099:16,16:13-16,13-16:12,15,0,0:16,12:NULL:194.439:366.612,131.36:1.26733,1.26733:0.0,0.00227994,0.997724	0/0:29:0.982059:12,12:11-13,11-13:14,6,0,8:11,2|12,12:4,1|6,1|8,2|9,1|10,2|11,1:184.4:326.675,113.385:0.280742,0.280742:1.87038e-14,0.0171058,0.98293
-chr1	4697462	.	ATTATTATTATT	.	.	.	END=4697473;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:22,30,0,3:4,22:3,3:390.194:366.612,131.36:0.0,0.0:0.0,1.00364e-06,1.0	0/0:53:1.0:4,4:4-4,4-4:31,20,0,2:4,31:3,2:325.467:326.675,113.385:0.0,0.0:0.0,2.24018e-09,1.0
-chr1	4698068	.	GGAGGAGGAGGA	GGAGGAGGAGGAGGAGGA	.	.	END=4698079;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.00001:6,6:6-6,6-6:23,16,0,4:6,23:4,3|5,1:261.501:366.612,131.36:0.0990099,0.0990099:0.0,5.27864e-08,1.0	0/0:26:0.999945:4,4:4-4,4-4:17,6,0,3:4,17:3,3:141.186:326.675,113.385:0.0,0.0:0.0,2.1746e-05,0.999979
-chr1	4699171	.	TTTTGTTTTGTTTTG	.	.	.	END=4699185;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:40,16,0,0:3,40:NULL:305.478:366.612,131.36:0.0,0.0:0.0,5.41064e-12,1.0	0/0:37:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:196.267:326.675,113.385:0.0,0.0:0.0,4.22444e-08,1.0
-chr1	4700769	.	CCTCCTCCTCCT	.	.	.	END=4700780;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,14,0,2:4,21:3,2:226.516:366.612,131.36:0.0,0.0:0.0,2.88555e-06,1.0	0/0:22:0.999993:4,4:4-4,4-4:19,3,0,0:4,19:NULL:101.437:326.675,113.385:0.0,0.0:0.0,1.29604e-05,0.999987
-chr1	4700784	.	CCACCACCACCA	.	.	.	END=4700795;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999947:4,4:4-4,4-4:17,13,0,3:4,17:3,3:209.523:366.612,131.36:0.0,0.0:0.0,2.62881e-05,0.999978	0/0:22:0.999771:4,4:4-4,4-4:15,4,0,3:4,15:3,3:116.705:326.675,113.385:0.0,0.0:7e-45,8.66633e-05,0.999917
-chr1	4702033	.	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4702088;RU=ac;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.949836:18,18:18-27,18-27:10,7,0,0:18,10:NULL:111.362:366.612,131.36:4.28531,4.28531:0.996482,0.00352666,0.0	2/0:38:0.603072:27,28:26-28,26-28:4,17,0,16:27,2|28,2:6,2|10,1|12,1|13,1|14,1|18,1|20,2|21,4|26,2|27,1:299.119:326.675,113.385:0.60323,0.547158:0.0242104,0.693448,0.282391
-chr1	4704115	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4704162;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	2/0:32:0.730822:23,24:23-24,24-24:8,14,0,10:23,3|24,5:5,2|11,2|15,3|17,1|18,1|23,1:250.512:326.675,113.385:0.498011,0.0990099:0.00034609,0.740631,0.259029
-chr1	4704841	.	TCTTTCTTTCTT	.	.	.	END=4704852;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:239.977:366.612,131.36:0.0,0.0:0.0,1.205e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:259.944:326.675,113.385:0.0,0.0:0.0,1.46928e-07,1.0
-chr1	4706710	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=4706733;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999301:6,6:6-6,6-6:14,12,0,9:6,14:3,4|4,4|5,1:233.335:366.612,131.36:0.0,0.0:1.17776e-34,0.000402795,0.999599	0/0:17:0.981548:6,6:6-6,6-6:9,4,0,4:6,9:3,2|4,1|5,1:103.685:326.675,113.385:0.0,0.0:8.31345e-23,0.00768594,0.992333
-chr1	4713034	.	ATATATATATAT	.	.	.	END=4713045;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.998997:6,6:6-7,6-7:14,12,0,0:6,14:NULL:161.232:366.612,131.36:0.345543,0.345543:1.41345e-23,0.000456233,0.999545	0/0:22:0.999591:6,6:6-6,6-6:15,7,0,0:6,15:NULL:125.478:326.675,113.385:0.0,0.0:4.14375e-25,0.000265164,0.999736
-chr1	4715718	.	TTGTTGTTGTTG	.	.	.	END=4715729;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999965:4,4:4-4,4-4:19,16,0,0:4,19:NULL:221.081:366.612,131.36:0.0,0.0:0.0,3.13059e-05,0.999971	0/0:30:1.0:4,4:4-4,4-4:19,9,0,2:4,19:3,2:175.124:326.675,113.385:0.0,0.0:0.0,8.15183e-06,0.999994
-chr1	4717842	.	TCTTTCTTTCTTTCTT	.	.	.	END=4717857;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:25,24,0,2:4,25:3,2:339.318:366.612,131.36:0.0,0.0:0.0,3.68868e-07,1.0	0/0:41:0.999986:4,4:4-4,4-4:20,21,0,0:4,20:NULL:270.973:326.675,113.385:0.0,0.0:0.0,2.59705e-05,0.999978
-chr1	4718882	.	AACTAACTAACT	.	.	.	END=4718893;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,20,0,2:3,24:2,2:285.668:366.612,131.36:0.0,0.0:0.0,4.09028e-07,1.0	0/0:26:0.999882:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.664:326.675,113.385:0.0,0.0:0.0,6.8464e-05,0.999933
-chr1	4719899	.	CACACACACACACACACA	CACACACACACACACACACA	.	.	END=4719916;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:0.997642:10,10:10-15,10-15:34,18,0,3:10,34:9,2|15,1:344.303:366.612,131.36:2.24763,2.24763:0.0,1.18615e-10,1.0	0/0:31:1.0:9,9:9-9,9-9:24,6,0,0:9,24:NULL:154.629:326.675,113.385:0.0990099,0.0990099:9.45833e-37,6.36154e-07,1.0
-chr1	4722124	.	AAACAAACAAACAAAC	AAACAAAC,AAACAAACAAAC	.	.	END=4722139;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.184894:2,3:1-4,2-4:0,27,0,2:NULL:3,2:288.601:366.612,131.36:0.914864,0.61098:0.38494,0.537507,0.0776752	0/0:30:0.999591:4,4:4-4,4-4:14,10,0,6:4,14:2,3|3,3:188.17:326.675,113.385:0.0,0.0:4.64806e-36,0.000157759,0.999843
-chr1	4725802	.	ACATACATACAT	.	.	.	END=4725813;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-9,3-9:32,16,0,0:3,32:NULL:276.69:366.612,131.36:2.76732,2.76732:0.0,2.35909e-09,1.0	0/0:35:1.0:3,3:3-3,3-3:27,8,0,0:3,27:NULL:182.575:326.675,113.385:0.0,0.0:0.0,4.38532e-08,1.0
-chr1	4726010	.	TTGCTTTGCTTTGCTTTGCTTTGCT	TTGCT	.	.	END=4726034;RU=ttgct;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0189889:1,1:1-5,1-5:0,9,0,0:NULL:NULL:79.2751:366.612,131.36:1.56624,1.56624:0.226535,0.525124,0.248383	0/0:34:1.00001:5,5:4-5,4-5:22,9,0,2:5,22:2,1|3,1:187.145:326.675,113.385:0.236383,0.236383:0.0,2.3239e-06,1.0
-chr1	4727699	.	ATAAATAAATAA	.	.	.	END=4727710;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:3:0.444226:3,3:3-3,3-3:3,0,0,0:3,3:NULL:11.7222:366.612,131.36:0.0,0.0:2.47845e-10,0.222364,0.777675	0/0:27:0.998966:3,3:3-3,3-3:13,14,0,0:3,13:NULL:177.13:326.675,113.385:0.0,0.0:4.2333e-41,0.000612016,0.999392
-chr1	4730651	.	CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	CTC	.	.	END=4730686;RU=ctc;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0285318:1,1:1-3,1-3:0,12,0,0:NULL:NULL:107.704:366.612,131.36:0.629628,0.629628:0.688685,0.293806,0.0175481	0/0:21:0.9577:12,12:11-12,11-12:8,9,0,3:12,8:8,2|11,1:137.236:326.675,113.385:0.382696,0.382696:2.19064e-17,0.0232822,0.976764
-chr1	4732027	.	CTCTCTCTCTCTCT	CTCTCTCTCTCT	.	.	END=4732040;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.0:6,6:6-6,6-6:40,9,0,0:6,40:NULL:244.43:366.612,131.36:0.0,0.0:1.0,6.78159e-12,0.0	0/0:39:0.999355:7,7:7-8,7-8:23,12,0,4:7,21|8,2:4,1|5,1|6,2:242.981:326.675,113.385:0.169767,0.169767:1.39357e-38,6.40975e-07,1.0
-chr1	4736939	.	AAATAAATAAATAAAT	.	.	.	END=4736954;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999453:4,4:4-4,4-4:15,16,0,0:4,15:NULL:209.92:366.612,131.36:0.0,0.0:4.8e-44,0.000465687,0.999537	0/0:14:0.826804:4,4:4-4,4-4:6,8,0,0:4,6:NULL:94.3292:326.675,113.385:0.0,0.0:3.84179e-18,0.110392,0.889705
-chr1	4744698	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTT	.	.	END=4744727;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999849:3,3:3-3,3-3:16,15,0,3:3,16:2,3:226.572:366.612,131.36:0.0,0.0:0.99998,1.92607e-05,0.0	0/0:29:0.999864:6,6:6-6,6-6:16,9,0,4:6,16:2,1|3,2|5,1:173.344:326.675,113.385:0.0,0.0:0.0,8.61569e-05,0.999917
-chr1	4746881	.	TAGATAGATAGA	.	.	.	END=4746892;RU=taga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,1|3,1:188.564:366.612,131.36:0.0,0.0:0.0,2.9315e-06,1.0	0/0:20:0.99898:3,3:3-3,3-3:13,7,0,0:3,13:NULL:113.283:326.675,113.385:0.0,0.0:1.927e-42,0.000512317,0.999491
-chr1	4749824	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=4749859;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.491197:12,14:12-19,12-19:6,15,0,0:12,2|13,2|14,2:NULL:170.202:366.612,131.36:2.80724,2.22986:0.998504,0.00150085,2.85157e-16	0/0:7:0.355433:18,18:17-18,17-18:3,3,0,0:18,3:NULL:40.6567:326.675,113.385:0.607117,0.607117:0.00025367,0.373956,0.625845
-chr1	4755604	.	GGAGGGAGGGAGGGAG	.	.	.	END=4755619;RU=ggag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.303264:4,4:4-4,4-4:2,5,0,0:4,2:NULL:51.7998:366.612,131.36:0.0,0.0:1.04381e-05,0.377089,0.622955	0/0:15:0.994918:4,4:4-4,4-4:11,2,0,2:4,11:2,2:74.6159:326.675,113.385:0.0,0.0:3.27251e-26,0.00232733,0.997678
-chr1	4755631	.	GAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAGGAGAG	.	.	.	END=4755720;RU=gagag;PERIOD=5;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.0345281:18,18:1-18,1-18:0,4,0,4:NULL:7,1|13,1|15,2:63.3554:366.612,131.36:4.54331,4.54331:0.631007,0.33457,0.0345084	0/0:21:0.204562:18,18:6-18,6-18:2,6,0,12:18,2:3,1|4,3|5,1|6,1|8,2|12,2|13,1|16,1:149.302:326.675,113.385:5.75506,5.75506:0.000265565,0.60808,0.39172
-chr1	4757329	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=4757372;RU=ct;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.0928393:18,18:18-21,18-21:0,24,0,0:NULL:NULL:219.478:366.612,131.36:1.4276,1.4276:0.50981,0.412801,0.0774748	0/0:17:0.290199:22,22:18-22,18-22:6,7,0,3:21,2|22,4:5,1|6,1|12,1:120.818:326.675,113.385:1.77374,1.77374:0.00012047,0.657285,0.34262
-chr1	4758257	.	AATAAATAAATA	AATA	.	.	END=4758268;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.247138:1,1:1-3,1-3:0,22,0,0:NULL:NULL:224.468:366.612,131.36:0.911644,0.911644:0.474337,0.438266,0.0875358	0/0:19:0.992514:3,3:3-3,3-3:10,7,0,2:3,10:2,2:120.596:326.675,113.385:0.0,0.0:2.10875e-29,0.00267692,0.99733
-chr1	4761246	.	TTTGTTTGTTTG	TTTGTTTG	.	.	END=4761257;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.999753:2,2:2-2,2-2:15,9,0,0:2,15:NULL:139.97:366.612,131.36:0.0,0.0:0.999841,0.000161256,4.8e-44	0/0:26:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:129.24:326.675,113.385:0.0,0.0:0.0,2.46117e-06,1.0
-chr1	4765570	.	AAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGA	AAAGA,AAAGAAAAGAAAAGAAAAGAAAAGA	.	.	END=4765609;RU=aaaga;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0327166:1,1:1-5,1-5:0,9,0,0:NULL:NULL:86.9262:366.612,131.36:1.26307,1.26307:0.53443,0.419224,0.0465006	2/2:1:0.020438:5,5:8-8,8-8:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
-chr1	4767274	.	TTTTGTTTTGTTTTG	TTTTGTTTTG	.	.	END=4767288;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.00001:2,2:2-2,2-2:22,11,0,0:2,22:NULL:183.799:366.612,131.36:0.0,0.0:1.0,1.05278e-06,0.0	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.989:326.675,113.385:0.0,0.0:0.0,1.98159e-06,1.0
-chr1	4769727	.	TTTTTTTGTTTTTTTGTTTTTTTG	TTTTTTTG	.	.	END=4769750;RU=tttttttg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.164897:1,1:1-2,1-2:0,27,0,0:NULL:NULL:231.409:366.612,131.36:0.412766,0.412766:0.544221,0.398179,0.057756	0/0:8:0.653109:3,3:1-3,1-3:4,3,0,0:3,4:NULL:42.5872:326.675,113.385:0.968882,0.968882:1.43076e-12,0.160707,0.839368
-chr1	4772542	.	AATAAATAAATAAATAAATAAATAAATA	.	.	.	END=4772569;RU=aata;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.275424:7,7:7-8,7-8:2,2,0,2:7,2:3,1|5,1:43.124:366.612,131.36:0.371782,0.371782:6.84117e-06,0.345865,0.654163	0/0:23:0.955763:7,7:7-7,7-7:7,9,0,7:7,7:3,1|5,2|6,4:162.133:326.675,113.385:0.0,0.0:5.84855e-18,0.0186585,0.981379
-chr1	4777183	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=4777216;RU=tc;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.998464:8,8:8-8,8-8:13,12,0,3:8,13:7,3:186.353:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:31:0.754583:17,17:16-17,16-17:5,14,0,11:17,5:4,1|5,2|6,1|9,1|10,1|11,1|12,1|14,1|16,2:236.182:326.675,113.385:0.442564,0.442564:3.68037e-08,0.107497,0.892602
-chr1	4778087	.	TGTGTGTGTGTG	TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG	.	.	END=4778098;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.982749:7,9:7-9,7-9:4,23,0,2:7,2|9,2:6,2:239.527:366.612,131.36:0.5634,0.665211:4.26849e-27,6.03865e-05,0.999941	0/0:31:0.996471:6,6:6-7,6-7:12,18,0,0:6,12:NULL:212.097:326.675,113.385:0.169767,0.169767:7.9323e-14,0.00208419,0.997921
-chr1	4779799	.	TGTGTGTGTGTGTG	.	.	.	END=4779812;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999841:7,7:7-7,7-7:16,14,0,0:7,16:NULL:192.429:366.612,131.36:0.0,0.0:2.56299e-31,8.08966e-05,0.999919	0/0:18:0.999693:7,7:7-7,7-7:15,1,0,2:7,15:5,1|6,1:84.5827:326.675,113.385:0.0,0.0:1.64184e-29,0.0001191,0.999881
-chr1	4780052	.	GTTTGTTTGTTT	.	.	.	END=4780063;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999904:3,3:3-3,3-3:17,19,0,0:3,17:NULL:238.62:366.612,131.36:0.0,0.0:0.0,7.31266e-05,0.999926	0/0:29:1.00001:3,3:3-3,3-3:20,7,0,2:3,20:2,2:156.501:326.675,113.385:0.0,0.0:0.0,2.69589e-06,1.0
-chr1	4781290	.	AAAACAAAACAAAACAAAAC	AAAAC	.	.	END=4781309;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.077236:1,1:1-3,1-3:0,9,0,0:NULL:NULL:83.6948:366.612,131.36:0.885129,0.885129:0.393228,0.473883,0.132974	0/0:22:0.998513:4,4:4-4,4-4:13,6,0,3:4,13:3,3:130.081:326.675,113.385:0.0,0.0:3.564e-42,0.000659424,0.999346
-chr1	4783247	.	ATATATATATATAT	ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATAT	.	.	END=4783260;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:15:0.914663:15,16:15-16,15-16:5,10,0,0:15,3|16,2:NULL:117.259:366.612,131.36:0.38423,0.661813:0.0,0.0,1.0	0/0:16:0.97951:7,7:6-7,6-7:10,5,0,0:7,10:NULL:92.6401:326.675,113.385:0.253975,0.253975:2.75527e-13,0.0112003,0.988822
-chr1	4783908	.	AAAAAACAAAAAACAAAAAAC	AAAAAAC	.	.	END=4783928;RU=aaaaaac;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.121674:1,1:1-2,1-2:0,13,0,0:NULL:NULL:122.189:366.612,131.36:0.38244,0.38244:0.327036,0.514355,0.158633	0/0:20:0.999388:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.87:326.675,113.385:0.0,0.0:0.0,0.00041394,0.99959
-chr1	4789575	.	TGAATGAATGAA	.	.	.	END=4789586;RU=tgaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.544:366.612,131.36:0.0,0.0:0.0,7.52438e-07,1.0	0/0:22:0.999979:3,3:3-3,3-3:18,4,0,0:3,18:NULL:103.76:326.675,113.385:0.0,0.0:0.0,1.71272e-05,0.999986
-chr1	4790408	.	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG,AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG	.	.	END=4790503;RU=aag;PERIOD=3;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0413989:14,14:14-16,14-16:0,14,0,3:NULL:5,1|12,1|14,1:150.9:366.612,131.36:0.752866,0.752866:1.0,0.0,0.0	2/2:28:0.0217444:31,31:6-32,6-32:0,12,0,13:NULL:6,1|7,2|9,1|12,1|15,1|22,1|28,4|29,1|31,1:211.088:326.675,113.385:11.7012,11.7012:0.153782,0.603073,0.243224
-chr1	4790591	.	AATAATAATAATAATAAT	AATAATAATAATAAT	.	.	END=4790608;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:1.00001:5,5:5-5,5-5:22,10,0,0:5,22:NULL:183.042:366.612,131.36:0.0,0.0:1.0,1.20863e-06,1e-44	0/0:19:0.999865:6,6:6-6,6-6:16,1,0,2:6,16:4,1|5,1:86.8798:326.675,113.385:0.0,0.0:9.7689e-37,5.64849e-05,0.999947
-chr1	4794293	.	AGACAGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGAC	.	.	END=4794312;RU=agac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:7,7:7-7,7-7:20,16,0,5:7,20:2,1|3,2|6,2:262.128:366.612,131.36:0.0,0.0:0.0,8.52709e-07,1.0	0/0:46:0.999962:5,5:4-5,4-5:17,18,0,10:5,17:2,2|3,2|4,6:306.135:326.675,113.385:0.236383,0.236383:0.0,1.79042e-05,0.999986
-chr1	4795085	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	END=4795132;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.983372:11,11:10-11,10-11:10,7,0,5:11,10:2,1|4,1|6,2|8,1:148.19:366.612,131.36:0.374147,0.374147:0.993804,0.00621315,1.9132e-19	0/0:18:0.808038:12,12:11-12,11-12:6,5,0,6:12,6:4,2|6,1|7,2|9,1:115.137:326.675,113.385:0.486863,0.486863:1.85358e-15,0.117728,0.882373
-chr1	4795238	.	GTTTTGTTTTGTTTTGTTTT	GTTTTGTTTT	.	.	END=4795257;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0361998:2,2:1-2,1-2:0,10,0,0:NULL:NULL:91.2136:366.612,131.36:0.497026,0.497026:0.251267,0.543828,0.204912	0/0:17:0.999259:4,4:4-4,4-4:14,3,0,0:4,14:NULL:82.904:326.675,113.385:0.0,0.0:0.0,0.000434742,0.999568
-chr1	4796020	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=4796043;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:2,2:223.615:366.612,131.36:0.0,0.0:1.0,1.53343e-06,0.0	0/0:47:0.999782:6,6:5-6,5-6:15,24,0,7:6,15:2,1|3,1|4,2|5,3:330.305:326.675,113.385:0.21692,0.21692:3.8787e-40,0.000165203,0.999835
-chr1	4802916	.	TCTCTCTCTCTCTC	TCTCTCTCTC,TCTCTCTCTCTCTCTC	.	.	END=4802929;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.942033:5,8:5-8,7-8:8,14,0,0:5,2|7,2|8,4:NULL:166.965:366.612,131.36:0.907009,0.442564:2.56506e-07,0.96656,0.0335034	0/0:32:0.999643:7,7:6-7,6-7:16,14,0,0:7,16:NULL:187.072:326.675,113.385:0.258566,0.258566:1.91725e-19,0.000245916,0.999757
-chr1	4804071	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=4804095;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.0894039:5,5:2-5,2-5:0,11,0,4:NULL:4,4:127.203:366.612,131.36:0.778346,0.778346:0.129595,0.474151,0.396449	0/0:28:0.999989:5,5:5-5,5-5:18,8,0,2:5,18:3,1|4,1:156.963:326.675,113.385:0.0,0.0:0.0,1.81889e-05,0.999985
-chr1	4804879	.	AAAAACAAAAACAAAAAC	.	.	.	END=4804896;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999446:3,3:3-3,3-3:14,20,0,0:3,14:NULL:236.542:366.612,131.36:0.0,0.0:0.0,0.000471379,0.99953	0/0:28:0.999832:3,3:3-3,3-3:16,12,0,0:3,16:NULL:173.907:326.675,113.385:0.0,0.0:0.0,0.00012135,0.99988
-chr1	4805189	.	ATTTATTTATTT	ATTTATTTATTTATTT	.	.	END=4805200;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.999411:3,4:3-4,4-4:18,5,0,2:3,6|4,12:2,2:141.207:366.612,131.36:0.323567,0.0:0.0,7.80262e-09,1.0	0/0:24:0.999635:3,3:3-3,3-3:15,9,0,0:3,15:NULL:140.572:326.675,113.385:0.0,0.0:0.0,0.000191892,0.999811
-chr1	4806133	.	TGTGTGTGTGTGTG	.	.	.	END=4806146;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995514:7,7:7-7,7-7:11,16,0,3:7,11:5,2|6,1:212.496:366.612,131.36:0.0,0.0:9.26685e-23,0.00238463,0.997624	0/0:34:0.999992:7,7:7-7,7-7:19,15,0,0:7,19:NULL:214.097:326.675,113.385:0.0,0.0:6.24431e-39,1.63575e-05,0.999986
-chr1	4806257	.	CTGACTGACTGA	.	.	.	END=4806268;RU=ctga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:159.946:366.612,131.36:0.0,0.0:0.0,2.69918e-07,1.0	0/0:25:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.994:326.675,113.385:0.0,0.0:0.0,2.00295e-05,0.99998
-chr1	4806381	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCT	.	.	END=4806412;RU=ttct;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0223139:1,1:1-2,1-2:0,9,0,0:NULL:NULL:81.0159:366.612,131.36:0.486863,0.486863:0.428852,0.485257,0.0860298	0/0:26:0.445733:8,8:6-8,6-8:3,10,0,13:8,3:2,1|3,1|4,1|5,3|6,7:196.493:326.675,113.385:0.390054,0.390054:0.000803766,0.336268,0.662947
-chr1	4808103	.	GCCTGCCTGCCT	.	.	.	END=4808114;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:189.832:366.612,131.36:0.0,0.0:0.0,6.95971e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:195.369:326.675,113.385:0.0,0.0:0.0,2.4422e-07,1.0
-chr1	4809703	.	ATGAATGAATGAATGA	.	.	.	END=4809718;RU=atga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999994:4,4:4-4,4-4:19,5,0,0:4,19:NULL:118.253:366.612,131.36:0.0,0.0:0.0,1.32162e-05,0.999987	0/0:25:0.99999:4,4:4-4,4-4:18,5,0,2:4,18:2,1|3,1:134.833:326.675,113.385:0.0,0.0:0.0,1.84135e-05,0.999985
-chr1	4809829	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=4809848;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:20,13,0,3:4,20:2,1|3,2:222.309:366.612,131.36:0.0,0.0:0.0,3.33137e-06,1.0	0/0:31:1.0:4,4:4-4,4-4:21,10,0,0:4,21:NULL:174.053:326.675,113.385:0.0,0.0:0.0,5.23654e-06,0.999995
-chr1	4809864	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4809903;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.88101:19,19:18-20,18-20:14,15,0,14:18,3|19,11:4,1|6,2|8,1|9,1|10,2|13,1|14,1|15,1|16,2|17,1|18,1:319.085:366.612,131.36:0.410384,0.410384:0.998451,0.00155301,1.22279e-11	0/2:43:0.997816:20,21:20-20,20-21:17,11,0,14:19,2|20,12|21,3:5,1|7,3|9,1|13,2|14,1|16,1|17,3|19,1|21,1:302.448:326.675,113.385:0.0990099,0.521285:9.21874e-20,2.73005e-07,1.0
-chr1	4810353	.	TTTGTTTGTTTG	.	.	.	END=4810364;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,16,0,2:3,24:2,2:248.206:366.612,131.36:0.0,0.0:0.0,2.23073e-07,1.0	0/0:39:1.0:3,3:3-3,3-3:30,9,0,0:3,30:NULL:203.079:326.675,113.385:0.0,0.0:0.0,2.59322e-09,1.0
-chr1	4810746	.	CATGCATGCATG	.	.	.	END=4810757;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:25,25,0,0:3,25:NULL:311.433:366.612,131.36:0.0,0.0:0.0,1.80033e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.068:326.675,113.385:0.0,0.0:0.0,7.25219e-07,1.0
-chr1	4810950	.	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC,TTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCC	.	.	END=4811123;RU=ttctcc;PERIOD=6;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.284642:15,19:7-15,7-21:3,3,0,14:15,3:4,1|5,2|6,2|7,3|8,2|9,1|10,1|13,1|19,1:141.767:366.612,131.36:3.80837,5.76309:1.0,0.0,0.0	3/4:51:0.181505:20,28:4-20,24-33:0,13,7,28:NULL:2,1|3,1|4,1|5,3|6,4|7,3|8,1|12,2|13,1|15,3|16,2|17,3|18,1|19,1|20,1:451.787:326.675,113.385:4.3648,2.33042:0.587313,0.412763,0.0
-chr1	4811609	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=4811650;RU=ga;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.795355:21,21:19-21,19-21:6,12,0,6:21,6:4,1|8,1|12,1|14,1|15,1|16,1:187.852:366.612,131.36:0.825531,0.825531:1.10236e-12,0.124233,0.875868	0/0:48:0.999961:21,21:19-21,19-21:25,13,0,9:19,2|20,2|21,21:5,1|8,1|11,2|12,2|16,1|17,1|21,1:310.978:326.675,113.385:0.339533,0.339533:0.0,4.87385e-05,0.999955
-chr1	4811806	.	TTTTGTTTTGTTTTG	.	.	.	END=4811820;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:26,9,0,3:3,26:2,3:205.931:366.612,131.36:0.0,0.0:0.0,2.39576e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:29,10,0,4:3,29:2,4:232.858:326.675,113.385:0.0,0.0:0.0,3.1766e-09,1.0
-chr1	4814327	.	AAATAAATAAAT	AAATAAAT	.	.	END=4814338;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:26:0.999999:2,3:2-2,2-3:12,14,0,0:2,9|3,3:NULL:181.575:366.612,131.36:0.0,0.36513:8.4454e-07,1.0,1.92825e-22	0/0:22:0.998738:3,3:3-3,3-3:13,9,0,0:3,13:NULL:134.801:326.675,113.385:0.0,0.0:6.24e-42,0.000728609,0.999272
-chr1	4815548	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4815577;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.978896:16,16:13-16,13-16:13,7,0,2:15,2|16,11:11,1|13,1:143.644:366.612,131.36:1.12671,1.12671:5.2269e-24,0.00115283,0.998853	0/0:38:0.99597:15,15:15-15,15-15:16,12,0,10:14,2|15,14:5,2|6,2|8,1|10,1|11,1|12,1|13,1|14,1:267.548:326.675,113.385:0.0990099,0.0990099:7.71523e-18,0.00342976,0.99658
-chr1	4817565	.	CAGCAGCAGCAG	.	.	.	END=4817576;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999968:4,4:4-4,4-4:19,22,0,0:4,19:NULL:273.457:366.612,131.36:0.0,0.0:0.0,3.97051e-05,0.999963	0/0:46:1.0:4,4:4-4,4-4:29,17,0,0:4,29:NULL:271.562:326.675,113.385:0.0,0.0:0.0,2.73496e-08,1.0
-chr1	4819449	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=4819472;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.630721:4,4:3-4,3-4:4,13,0,2:4,4:3,2:153.492:366.612,131.36:0.330165,0.330165:0.92114,0.0789544,1.7293e-13	0/0:38:0.999954:6,6:6-8,6-8:16,13,0,8:6,16:2,1|3,1|4,1|5,5:240.238:326.675,113.385:0.797014,0.797014:3e-45,2.72189e-05,0.999972
-chr1	4820555	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4820572;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99982:10,10:10-10,10-10:16,10,0,5:10,16:6,1|7,2|9,2:200.216:366.612,131.36:0.0,0.0:0.0,2.30314e-05,0.999979	0/2:62:0.351083:9,12:9-9,9-14:31,20,0,10:9,31:4,3|5,3|6,1|7,1|12,2:410.123:326.675,113.385:0.0,1.53456:0.0,1.54242e-14,1.0
-chr1	4822262	.	TGTTTGTTTGTT	TGTT	.	.	END=4822273;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.0821131:1,1:1-3,1-3:0,25,0,0:NULL:NULL:224.832:366.612,131.36:0.556749,0.556749:0.273043,0.514863,0.212099	0/0:43:1.0:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.716:326.675,113.385:0.0,0.0:0.0,6.86054e-07,1.0
-chr1	4822494	.	CACACACACACA	.	.	.	END=4822505;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:29,13,0,0:6,29:NULL:234.205:366.612,131.36:0.0,0.0:0.0,1.70101e-08,1.0	0/0:51:1.00001:6,6:6-7,6-7:23,20,0,7:6,23:4,1|5,5|6,1:327.044:326.675,113.385:0.169767,0.169767:0.0,2.23788e-07,1.0
-chr1	4823989	.	TGTCTGTCTGTCTGTCTGTCTGTC	TGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTC	.	.	END=4824012;RU=tgtc;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.00001:8,8:8-8,8-8:22,11,0,7:8,22:2,1|3,2|4,1|5,1|6,2:243.729:366.612,131.36:0.0990099,0.0990099:0.0,3.8867e-07,1.0	0/0:36:1.00001:6,6:6-6,6-6:21,12,0,3:6,21:3,1|5,2:217.679:326.675,113.385:0.0,0.0:0.0,1.83163e-06,1.0
-chr1	4831112	.	CTGGCTGGCTGG	.	.	.	END=4831123;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:27,19,0,0:3,27:NULL:275.992:366.612,131.36:0.0,0.0:0.0,5.25396e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:30,10,0,0:3,30:NULL:208.27:326.675,113.385:0.0,0.0:0.0,5.0826e-09,1.0
-chr1	4832670	.	CTCCCTCCCTCC	CTCCCTCCCTCCCTCC	.	.	END=4832681;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:25,23,0,2:3,25:2,2:329.873:366.612,131.36:0.0,0.0:0.0,1.7607e-07,1.0	0/1:48:0.359416:3,4:3-3,3-4:23,22,0,3:3,23:2,2|4,1:343.057:326.675,113.385:0.0,0.519212:0.0,5.03971e-08,1.0
-chr1	4835862	.	TTTTGTTTTGTTTTG	.	.	.	END=4835876;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:194.431:366.612,131.36:0.0,0.0:0.0,1.38502e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:28,9,0,0:3,28:NULL:199.012:326.675,113.385:0.0,0.0:0.0,2.26284e-08,1.0
-chr1	4836013	.	TTTCTTTTCTTTTCT	.	.	.	END=4836027;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.99706:3,3:3-3,3-3:11,10,0,2:3,11:2,2:144.957:366.612,131.36:0.0,0.0:4.62434e-36,0.00126048,0.998746	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:199.94:326.675,113.385:0.0,0.0:0.0,7.37652e-07,1.0
-chr1	4836682	.	TTTATTTATTTA	.	.	.	END=4836693;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999993:3,3:3-3,3-3:19,17,0,0:3,19:NULL:231.07:366.612,131.36:0.0,0.0:0.0,1.7298e-05,0.999986	0/0:33:0.999991:3,3:3-3,3-3:18,13,0,2:3,18:2,2:204.284:326.675,113.385:0.0,0.0:0.0,1.45272e-05,0.999987
-chr1	4837261	.	TTCATTCATTCATTCATTCA	TTCA	.	.	END=4837280;RU=ttca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0690482:1,1:1-1,1-1:0,16,0,0:NULL:NULL:142.057:366.612,131.36:0.19802,0.19802:0.394443,0.481659,0.12399	0/0:20:0.99859:5,5:5-5,5-5:13,7,0,0:5,13:NULL:113.046:326.675,113.385:0.0,0.0:8.49476e-37,0.000864304,0.999141
-chr1	4840709	.	AATAAATAAATA	.	.	.	END=4840720;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999165:3,3:3-3,3-3:13,16,0,0:3,13:NULL:199.55:366.612,131.36:0.0,0.0:1.36e-43,0.000665667,0.999339	0/0:22:0.951778:3,3:3-3,3-3:8,14,0,0:3,8:NULL:157.058:326.675,113.385:0.0,0.0:1.58998e-26,0.0305701,0.969486
-chr1	4841846	.	AAAGAAAGAAAG	AAAGAAAG	.	.	END=4841857;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.00001:2,2:2-2,2-2:22,14,0,0:2,22:NULL:212.561:366.612,131.36:0.0,0.0:1.0,7.47019e-07,0.0	0/0:20:0.999869:3,3:3-3,3-3:16,4,0,0:3,16:NULL:102.145:326.675,113.385:0.0,0.0:0.0,6.76053e-05,0.999933
-chr1	4843541	.	TTTGTTTGTTTG	.	.	.	END=4843552;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:240.43:366.612,131.36:0.0,0.0:0.0,1.4138e-08,1.0	0/0:26:1.00001:3,3:3-3,3-3:20,4,0,2:3,20:2,2:127.33:326.675,113.385:0.0,0.0:0.0,2.47031e-06,1.0
-chr1	4844779	.	AAAATAAAATAAAAT	.	.	.	END=4844793;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999617:3,3:3-3,3-3:15,11,0,0:3,15:NULL:162.206:366.612,131.36:0.0,0.0:6.3e-44,0.000244671,0.999758	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.43:326.675,113.385:0.0,0.0:0.0,2.47012e-06,1.0
-chr1	4845843	.	AAACAAACAAACAAACAAAC	.	.	.	END=4845862;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:5,5:5-5,5-5:23,27,0,2:5,23:3,1|4,1:355.553:366.612,131.36:0.0,0.0:0.0,5.15931e-07,1.0	0/0:36:0.999957:5,5:5-5,5-5:17,14,0,5:5,17:3,3|4,2:229.622:326.675,113.385:0.0,0.0:0.0,2.45349e-05,0.999978
-chr1	4846452	.	CCAACCAACCAA	.	.	.	END=4846463;RU=ccaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.981252:3,3:3-3,3-3:9,11,0,2:3,9:2,2:146.9:366.612,131.36:0.0,0.0:1.18375e-29,0.00809632,0.991921	0/0:21:0.99958:3,3:3-3,3-3:14,5,0,2:3,14:2,2:113.893:326.675,113.385:0.0,0.0:0.0,0.000159645,0.999842
-chr1	4848400	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4848435;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:7,7:7-7,7-7:21,25,0,5:7,21:3,1|4,2|5,1|6,1:348.189:366.612,131.36:0.0,0.0:1.0,1.1066e-06,0.0	0/0:34:0.977879:9,9:8-9,8-9:9,15,0,9:9,9:3,1|5,2|6,2|7,2|8,2:239.873:326.675,113.385:0.437216,0.437216:9.02383e-25,0.011419,0.988606
-chr1	4849030	.	AAAGAAAGAAAGAAAG	.	.	.	END=4849045;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:245.114:366.612,131.36:0.0,0.0:0.0,2.42971e-06,1.0	0/0:30:0.999962:4,4:4-4,4-4:18,12,0,0:4,18:NULL:181.991:326.675,113.385:0.0,0.0:0.0,4.23994e-05,0.999957
-chr1	4849772	.	CAACAACAACAACAACAACAACAACAA	CAACAACAACAACAA	.	.	END=4849798;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999796:5,5:5-5,5-5:16,10,0,0:5,16:NULL:158.209:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:38:1.0:9,9:9-9,9-9:20,14,0,3:9,20:4,1|5,1|7,1:234.633:326.675,113.385:0.0990099,0.0990099:0.0,1.02211e-05,0.999993
-chr1	4850587	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4850616;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.935192:22,24:22-26,24-26:7,7,0,11:22,2|24,5:4,1|8,1|10,2|13,1|16,1|18,1|19,1|20,1|23,1|24,1:190.511:366.612,131.36:1.82006,0.507951:0.0,0.0,1.0	0/0:27:0.504365:15,15:12-15,12-15:8,8,0,9:14,2|15,6:9,1|11,2|13,3|14,3:186.57:326.675,113.385:0.877565,0.877565:1.92327e-06,0.477716,0.522377
-chr1	4858043	.	GGGCCGGGCCGGGCCGGGCC	GGGCCGGGCCGGGCC	.	.	END=4858062;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:54:1.0:3,4:3-4,4-4:35,19,0,0:3,6|4,29:NULL:341.472:366.612,131.36:0.390807,0.0:0.0,1.0,3.05897e-06	0/0:46:1.0:4,4:4-4,4-4:31,11,0,4:4,31:3,4:261.334:326.675,113.385:0.0,0.0:0.0,2.28666e-09,1.0
-chr1	4858328	.	GCTGCTGCTGCT	.	.	.	END=4858339;RU=gct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:29,23,0,3:4,29:3,3:364.467:366.612,131.36:0.0,0.0:0.0,5.83154e-09,1.0	0/0:40:1.0:4,4:4-4,4-4:30,10,0,0:4,30:NULL:212.965:326.675,113.385:0.0,0.0:0.0,7.88224e-09,1.0
-chr1	4859454	.	CAAACAAACAAA	.	.	.	END=4859465;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.997279:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.94:366.612,131.36:0.0,0.0:1.15188e-38,0.00183885,0.998169	0/0:9:0.96338:3,3:3-3,3-3:8,1,0,0:3,8:NULL:42.1661:326.675,113.385:0.0,0.0:2.92369e-26,0.0150861,0.984943
-chr1	4859713	.	CTCTCTCTCTCTCTCT	.	.	.	END=4859728;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997518:8,8:8-8,8-8:13,12,0,0:8,13:NULL:164.513:366.612,131.36:0.0,0.0:6.90662e-25,0.0017479,0.99826	0/0:26:0.957459:8,8:8-8,8-8:8,16,0,2:8,8:5,1|7,1:195.057:326.675,113.385:0.0,0.0:8.91426e-16,0.0212945,0.978746
-chr1	4861410	.	TTCTTTCTTTCT	.	.	.	END=4861421;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:224.402:366.612,131.36:0.0,0.0:0.0,2.06593e-08,1.0	0/0:23:0.999288:3,3:3-3,3-3:13,7,0,3:3,13:2,3:138.485:326.675,113.385:0.0,0.0:1.7e-44,0.000239742,0.999765
-chr1	4862097	.	ACACACACACACACACAC	.	.	.	END=4862114;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:9,9:9-9,9-9:26,20,0,4:9,26:6,1|7,2|8,1:325.837:366.612,131.36:0.172061,0.172061:0.0,4.50161e-08,1.0	0/0:34:0.988749:9,9:7-9,7-9:17,10,0,6:8,2|9,15:5,1|6,4|7,1:219.231:326.675,113.385:0.631028,0.631028:3.55181e-24,0.0112089,0.988814
-chr1	4862140	.	ACACACACACACAC	ACACACACACACACACAC	.	.	END=4862153;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.475531:7,9:7-7,8-9:16,22,0,5:7,16:8,4|9,1:320.291:366.612,131.36:0.0,0.510837:0.0,2.3204e-33,1.0	0/0:20:0.976578:7,7:7-7,7-7:9,11,0,0:7,9:NULL:141.55:326.675,113.385:0.0,0.0:2.90656e-20,0.0134479,0.986579
-chr1	4864608	.	AAACAAACAAAC	.	.	.	END=4864619;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,10,0,2:3,25:2,2:205.564:366.612,131.36:0.0,0.0:0.0,1.127e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:153.582:326.675,113.385:0.0,0.0:0.0,1.29397e-06,1.0
-chr1	4866501	.	CCAGGCTGGCCTCCAGGCTGGCCTCCAGGCTGGCCT	CCAGGCTGGCCTCCAGGCTGGCCT	.	.	END=4866536;RU=ccaggctggcct;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999145:2,2:2-2,2-2:13,12,0,0:2,13:NULL:158.09:366.612,131.36:0.0,0.0:0.999728,0.000272618,2.5201e-19	0/0:22:0.999134:3,3:3-3,3-3:14,6,0,2:3,14:2,2:130.066:326.675,113.385:0.0,0.0:1.10892e-17,0.000575615,0.99943
-chr1	4867295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=4867334;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.102623:22,23:10-23,10-24:0,18,0,14:NULL:5,1|6,2|7,2|8,1|10,2|16,1|17,2|20,2|22,1:279.652:366.612,131.36:2.91557,2.97962:1.37974e-22,0.306397,0.693615	0/0:43:0.943524:20,20:7-21,7-21:9,20,0,11:20,9:7,1|8,3|10,1|12,1|13,1|15,3|19,1:314.66:326.675,113.385:6.33959,6.33959:2.54871e-11,0.028072,0.971984
-chr1	4867339	.	TACATACATACATACA	TACATACATACATACATACA	.	.	END=4867354;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999979:5,5:5-5,5-5:27,21,0,2:4,2|5,25:3,2:323.082:366.612,131.36:0.0,0.0:0.0,4.58403e-08,1.0	0/0:39:1.0:4,4:4-4,4-4:19,17,0,3:4,19:3,3:256.592:326.675,113.385:0.0,0.0:0.0,1.11741e-05,0.999993
-chr1	4870254	.	TATTTATTTATT	.	.	.	END=4870265;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999596:3,3:3-3,3-3:14,14,0,3:3,14:2,3:203.164:366.612,131.36:0.0,0.0:1e-45,0.000216245,0.999788	0/0:27:0.999891:3,3:3-3,3-3:16,8,0,3:3,16:2,3:156.429:326.675,113.385:0.0,0.0:0.0,4.43e-05,0.999956
-chr1	4871522	.	TCCTCCTCCTCC	.	.	.	END=4871533;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:4,4:4-4,4-4:31,29,0,0:4,31:NULL:387.375:366.612,131.36:0.0,0.0:0.0,6.72445e-09,1.0	0/0:47:1.0:4,4:4-4,4-4:34,13,0,0:4,34:NULL:253.255:326.675,113.385:0.0,0.0:0.0,5.23008e-10,1.0
-chr1	4874307	.	GGAAGGAAGGAA	.	.	.	END=4874318;RU=ggaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999255:3,3:3-3,3-3:14,13,0,0:3,14:NULL:179.186:366.612,131.36:0.0,0.0:1e-45,0.000496271,0.999507	0/0:22:0.999929:3,3:3-3,3-3:17,5,0,0:3,17:NULL:113.657:326.675,113.385:0.0,0.0:0.0,3.86341e-05,0.999963
-chr1	4874466	.	AACAACAACAACAAC	AACAACAACAAC	.	.	END=4874480;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:37:0.993994:4,5:4-5,5-5:17,20,0,0:4,3|5,14:NULL:266.538:366.612,131.36:0.398507,0.0:1.51296e-36,0.993994,0.00601875	0/0:20:0.993029:5,5:4-5,4-5:11,8,0,0:5,11:NULL:115.916:326.675,113.385:0.492866,0.492866:1.06517e-32,0.00475677,0.995257
-chr1	4877242	.	TATTTATTTATTTATT	TATT,TATTTATTTATT	.	.	END=4877257;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:6:0.0150407:1,3:1-3,1-3:0,6,0,0:NULL:NULL:53.3083:366.612,131.36:0.825769,0.877677:0.0641034,0.438012,0.498075	0/0:18:0.999635:4,4:4-4,4-4:15,3,0,0:4,15:NULL:86.5963:326.675,113.385:0.0,0.0:3e-45,0.000210023,0.99979
-chr1	4878697	.	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	CTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTT	.	.	END=4878766;RU=ctctt;PERIOD=5;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.98803:13,13:13-13,13-13:10,13,0,11:13,10:2,2|4,1|6,1|8,1|9,2|10,1|11,3:246.043:366.612,131.36:0.0,0.0:0.996172,0.00383706,7.51694e-21	0/0:27:0.869346:14,14:13-14,13-14:6,9,0,11:14,6:2,1|3,2|5,2|7,1|10,1|11,1|12,3:187.457:326.675,113.385:0.495841,0.495841:3.7595e-17,0.0802297,0.919866
-chr1	4878791	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	END=4878822;RU=ctcc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.227777:10,10:3-10,3-10:5,14,0,0:10,5:NULL:149.658:366.612,131.36:3.15514,3.15514:4.32064e-13,0.665501,0.334514	0/0:13:0.385621:8,8:6-8,6-8:3,10,0,0:8,3:NULL:108.263:326.675,113.385:0.592572,0.592572:5.86256e-05,0.414281,0.585739
-chr1	4880388	.	CTTCTTCTTCTT	.	.	.	END=4880399;RU=ctt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99948:4,4:4-4,4-4:15,16,0,0:4,15:NULL:206.169:366.612,131.36:0.0,0.0:0.0,0.000409236,0.999591	0/0:36:1.0:4,4:4-4,4-4:23,13,0,0:4,23:NULL:208.752:326.675,113.385:0.0,0.0:0.0,1.05248e-06,1.0
-chr1	4881181	.	TGTTTTGTTTTGTTT	.	.	.	END=4881195;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:27,27,0,0:3,27:NULL:352.532:366.612,131.36:0.0,0.0:0.0,1.58999e-07,1.0	0/0:21:0.999866:3,3:2-3,2-3:16,4,0,0:3,16:NULL:98.8823:326.675,113.385:0.44763,0.44763:0.0,7.15648e-05,0.999932
-chr1	4882279	.	TTATTATTATTA	.	.	.	END=4882290;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.407704:4,4:3-4,3-4:3,11,0,0:4,3:NULL:117.024:366.612,131.36:0.169767,0.169767:7.928e-10,0.348483,0.65155	0/0:14:0.910161:4,4:4-4,4-4:7,7,0,0:4,7:NULL:89.739:326.675,113.385:0.0,0.0:1.5882e-21,0.056422,0.943661
-chr1	4885247	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATC,TATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=4885286;RU=tatc;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.950189:8,9:8-10,9-9:15,17,0,3:8,3|9,12:4,1|6,1|7,1:247.157:366.612,131.36:0.653465,0.0:0.999994,7.2535e-06,3.8647e-26	0/0:34:0.973807:10,10:10-11,10-11:9,15,0,9:10,9:3,2|4,1|6,2|7,2|9,2:249.563:326.675,113.385:0.425627,0.425627:4.41641e-18,0.0157938,0.984241
-chr1	4885324	.	TTAGTTAGTTAGTTAGTTAGTTAG	TTAGTTAGTTAGTTAGTTAG,TTAGTTAGTTAGTTAGTTAGTTAGTTAG	.	.	END=4885347;RU=ttag;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:38:0.874592:5,7:5-7,7-7:18,12,0,7:5,2|7,16:3,4|4,3:251.737:366.612,131.36:0.899738,0.0:6.23911e-39,0.87467,0.125428	0/0:33:0.998726:6,6:5-6,5-6:13,13,0,6:6,13:3,2|5,4:218.947:326.675,113.385:0.40582,0.40582:1.3011e-26,0.000756045,0.999248
-chr1	4890962	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=4890997;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.0:8,8:8-8,8-8:19,7,0,7:8,19:2,1|3,4|6,1|7,1:192.509:366.612,131.36:0.0,0.0:0.999993,9.55034e-06,7.84969e-35	0/0:38:1.00001:9,9:9-9,9-9:22,10,0,5:9,22:2,1|3,1|4,1|8,2:219.858:326.675,113.385:0.0990099,0.0990099:0.0,1.1242e-06,1.0
-chr1	4894530	.	GTTGGTTGGTTG	.	.	.	END=4894541;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:23,21,0,2:3,23:2,2:290.005:366.612,131.36:0.0,0.0:0.0,5.67316e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:213.064:326.675,113.385:0.0,0.0:0.0,4.05818e-07,1.0
-chr1	4895853	.	CTCACTCACTCA	.	.	.	END=4895864;RU=ctca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999177:3,3:3-3,3-3:13,11,0,0:3,13:NULL:150.405:366.612,131.36:0.0,0.0:7.8e-44,0.000490639,0.999514	0/0:32:0.999992:3,3:3-3,3-3:18,14,0,0:3,18:NULL:199.106:326.675,113.385:0.0,0.0:0.0,1.80082e-05,0.999985
-chr1	4899661	.	ACACACACACACACAC	ACACACACACACAC	.	.	END=4899676;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.00001:7,7:7-7,7-7:22,19,0,4:7,22:5,1|6,2|7,1:294.528:366.612,131.36:0.0990099,0.0990099:1.0,1.37938e-06,1.61122e-33	0/0:41:0.999948:8,8:8-8,8-8:26,12,0,2:7,2|8,24:6,2:240.928:326.675,113.385:0.0990099,0.0990099:3.6123e-41,5.54085e-05,0.999948
-chr1	4902415	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=4902432;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.881129:9,9:8-10,8-10:7,11,0,2:9,7:6,1|8,1:146.361:366.612,131.36:0.696456,0.696456:1.12057e-12,0.0606104,0.939477	0/0:24:0.99869:9,9:9-12,9-12:14,7,0,2:9,14:7,2:137.093:326.675,113.385:1.27688,1.27688:1.593e-24,0.000449994,0.999553
-chr1	4902708	.	TGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG	.	.	END=4902725;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.413074:7,7:5-7,5-7:3,14,0,2:7,3:5,2:154.668:366.612,131.36:0.634282,0.634282:0.822065,0.178005,7.49676e-08	0/0:16:0.866791:9,9:9-10,9-10:7,8,0,0:9,7:NULL:102.351:326.675,113.385:0.486863,0.486863:2.29488e-12,0.0699126,0.930182
-chr1	4903639	.	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	TTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	.	.	END=4903674;RU=tttttg;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.239431:7,7:4-7,4-7:2,10,0,0:7,2:NULL:101.832:366.612,131.36:0.949876,0.949876:3.28881e-07,0.444397,0.555709	0/0:28:0.999917:6,6:6-6,6-6:17,9,0,2:6,17:3,1|5,1:173.895:326.675,113.385:0.0,0.0:0.0,6.41162e-05,0.99994
-chr1	4903855	.	TTTGTTTGTTTG	.	.	.	END=4903866;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:185.345:366.612,131.36:0.0,0.0:0.0,7.09136e-06,0.999994	0/0:24:0.990731:3,3:3-3,3-3:10,14,0,0:3,10:NULL:170.769:326.675,113.385:0.0,0.0:5.87266e-34,0.00569124,0.994324
-chr1	4905039	.	TACATACATACA	.	.	.	END=4905050;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:23,13,0,0:3,23:NULL:208.626:366.612,131.36:0.0,0.0:0.0,6.88669e-07,1.0	0/0:28:1.0:3,3:3-3,3-3:19,6,0,3:3,19:2,3:151.536:326.675,113.385:0.0,0.0:0.0,5.64564e-06,0.999995
-chr1	4905095	.	TGGATGGATGGA	.	.	.	END=4905106;RU=tgga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999923:3,3:3-3,3-3:17,12,0,0:3,17:NULL:174.614:366.612,131.36:0.0,0.0:0.0,4.30267e-05,0.999957	0/0:31:1.0:3,3:3-3,3-3:25,4,0,2:3,25:2,2:148.365:326.675,113.385:0.0,0.0:0.0,8.21081e-08,1.0
-chr1	4909777	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=4909828;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.430922:25,27:13-25,13-27:9,7,0,15:25,9:5,1|6,1|7,1|10,1|14,1|15,1|16,1|17,2|19,3|23,1|25,1|27,1:229.804:366.612,131.36:4.01858,5.57861:4.85751e-06,0.999988,1.00647e-05	0/3:37:0.321447:26,36:25-26,25-36:5,15,0,17:25,2|26,3:6,3|11,1|12,2|13,2|14,2|15,1|17,1|20,1|22,1|24,1|25,1|33,1:305.858:326.675,113.385:0.284901,4.78637:2.06714e-08,0.0110324,0.988992
-chr1	4909833	.	ATGCATGCATGC	.	.	.	END=4909844;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997586:3,3:3-3,3-3:12,13,0,0:3,12:NULL:161.285:366.612,131.36:0.0,0.0:1.12194e-39,0.00116656,0.998838	0/0:33:0.999905:3,3:3-3,3-3:16,17,0,0:3,16:NULL:217.664:326.675,113.385:0.0,0.0:0.0,7.34374e-05,0.999926
-chr1	4914303	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=4914366;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.963093:13,13:13-13,13-13:8,20,0,13:13,8:3,1|4,2|5,1|8,1|9,1|10,2|11,1|12,4:314.081:366.612,131.36:0.0,0.0:0.995673,0.00433868,3.36631e-24	0/0:26:0.640366:16,16:15-16,15-16:4,12,0,9:16,4:3,1|5,1|9,1|12,1|13,3|14,1|15,1:192.607:326.675,113.385:0.499779,0.499779:4.19595e-09,0.200213,0.79983
-chr1	4914896	.	GGAGGAGGAGGA	.	.	.	END=4914907;RU=gga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:21,28,0,0:4,21:NULL:340.103:366.612,131.36:0.0,0.0:0.0,6.01108e-06,0.999995	0/0:23:0.93709:4,4:4-4,4-4:8,15,0,0:4,8:NULL:166.795:326.675,113.385:0.0,0.0:8.34997e-25,0.0488196,0.951257
-chr1	4916037	.	TACATACATACATACA	.	.	.	END=4916052;RU=taca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:4,4:4-4,4-4:30,25,0,3:4,30:3,3:372.561:366.612,131.36:0.0,0.0:0.0,5.3936e-09,1.0	0/0:48:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,2|4,1:275.235:326.675,113.385:0.0,0.0:0.0,7.53442e-10,1.0
-chr1	4918464	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	.	END=4918491;RU=ggag;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.974661:7,7:7-7,7-7:9,16,0,3:7,9:2,1|3,1|6,1:208.115:366.612,131.36:0.0,0.0:4.71002e-17,0.0165889,0.983445	0/0:23:0.935308:7,7:7-7,7-7:8,15,0,0:7,8:NULL:175.432:326.675,113.385:0.29703,0.29703:2.75131e-15,0.0517317,0.948348
-chr1	4918494	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GA,GAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=4918545;RU=ga;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:5:0.00284588:1,9:1-13,1-13:0,5,0,0:NULL:NULL:45.8483:366.612,131.36:4.3402,4.33937:0.395201,0.511789,0.0931213	3/0:28:0.930118:25,26:21-26,21-26:6,14,0,7:25,3|26,3:5,1|8,2|10,2|11,1|21,1:212.74:326.675,113.385:1.98598,1.86701:0.00122754,0.952779,0.0460742
-chr1	4920839	.	TTATTATTATTA	.	.	.	END=4920850;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999195:4,4:2-4,2-4:14,7,0,0:4,14:NULL:119.597:366.612,131.36:0.973726,0.973726:7.7e-44,0.000479133,0.999523	0/0:18:0.998916:4,4:4-4,4-4:13,3,0,2:4,13:3,2:92.8638:326.675,113.385:0.0,0.0:9.477e-41,0.000412151,0.999591
-chr1	4920879	.	TGGCTGGCTGGC	.	.	.	END=4920890;RU=tggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999941:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.755:366.612,131.36:0.0,0.0:4.2e-44,3.98504e-05,0.999963	0/0:18:0.995248:3,3:3-3,3-3:11,7,0,0:3,11:NULL:106.999:326.675,113.385:0.0,0.0:7.72716e-29,0.00241556,0.997593
-chr1	4920889	.	GCCAGCCAGCCA	.	.	.	END=4920900;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:3,3:3-3,3-3:19,8,0,0:3,19:NULL:148.616:366.612,131.36:0.0,0.0:0.0,9.76148e-06,0.999993	0/0:18:0.995246:3,3:3-3,3-3:11,7,0,0:3,11:NULL:107.018:326.675,113.385:0.0,0.0:3.17835e-37,0.00238722,0.997618
-chr1	4921013	.	ATTTATTTATTT	.	.	.	END=4921024;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.906659:3,3:3-3,3-3:6,20,0,0:3,6:NULL:204.332:366.612,131.36:0.0,0.0:1.3993e-19,0.0448965,0.955176	0/0:18:0.983079:3,3:3-3,3-3:9,9,0,0:3,9:NULL:115.759:326.675,113.385:0.0,0.0:8.49186e-29,0.00831875,0.991703
-chr1	4921202	.	TTCTTCTTCTTC	.	.	.	END=4921213;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999931:4,4:4-4,4-4:17,13,0,0:4,17:NULL:190.356:366.612,131.36:0.0,0.0:0.0,3.68238e-05,0.999964	0/0:16:0.996708:4,4:4-4,4-4:12,4,0,0:4,12:NULL:86.1021:326.675,113.385:0.0,0.0:6.54629e-39,0.00186305,0.998141
-chr1	4921293	.	ATTTATTTATTTATTT	.	.	.	END=4921308;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.983004:4,4:4-4,4-4:9,19,0,3:4,9:3,3:231.443:366.612,131.36:0.0,0.0:1.93803e-24,0.00857355,0.991448	0/0:24:0.996908:4,4:4-4,4-4:12,12,0,0:4,12:NULL:152.192:326.675,113.385:0.0,0.0:2.11086e-32,0.00229159,0.997715
-chr1	4922764	.	AAATAAATAAAT	.	.	.	END=4922775;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999992:3,3:3-3,3-3:18,12,0,0:3,18:NULL:180.383:366.612,131.36:0.0,0.0:0.0,1.69412e-05,0.999986	0/0:25:0.999375:3,3:3-3,3-3:14,9,0,2:3,14:2,2:161.812:326.675,113.385:0.0,0.0:1e-45,0.000258235,0.999743
-chr1	4925089	.	ATTCATTCATTCATTCATTC	.	.	.	END=4925108;RU=attc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.00001:5,5:5-5,5-5:21,26,0,3:5,21:4,3:340.176:366.612,131.36:0.0,0.0:0.0,2.28456e-06,1.0	0/0:51:1.0:5,5:5-5,5-5:25,19,0,7:5,25:3,1|4,5|5,1:319.377:326.675,113.385:0.0,0.0:0.0,7.26226e-08,1.0
-chr1	4930713	.	ATCTATCTATCT	.	.	.	END=4930724;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:30,21,0,4:3,30:2,4:335.927:366.612,131.36:0.0,0.0:0.0,3.17815e-09,1.0	0/0:30:0.999985:3,3:3-3,3-3:18,12,0,0:3,18:NULL:177.406:326.675,113.385:0.0,0.0:0.0,2.00988e-05,0.99998
-chr1	4931717	.	AGAGAGAGAGAGAG	AGAGAGAGAGAG	.	.	END=4931730;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:61:1.0:6,7:6-6,7-7:32,29,0,0:6,13|7,19:NULL:403.191:366.612,131.36:0.0990099,0.0:7.75488e-31,1.0,1.62485e-09	0/0:50:1.00001:7,7:7-8,7-8:22,21,0,6:7,22:5,4|6,2:328.993:326.675,113.385:0.21692,0.21692:1e-45,1.63351e-06,1.0
-chr1	4931731	.	ACACACACACAC	.	.	.	END=4931742;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.00001:6,6:5-7,5-7:20,31,0,5:6,20:5,3|6,2:390.258:366.612,131.36:0.342408,0.342408:0.0,1.01925e-06,1.0	0/0:41:1.0:6,6:6-6,6-6:21,20,0,0:6,21:NULL:267.481:326.675,113.385:0.0,0.0:0.0,8.48974e-06,0.999994
-chr1	4935229	.	CTCCCTCCCTCCCTCC	.	.	.	END=4935244;RU=ctcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,21,0,0:4,28:NULL:301.091:366.612,131.36:0.0990099,0.0990099:0.0,3.72473e-08,1.0	0/0:35:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:198.54:326.675,113.385:0.0,0.0:0.0,1.37551e-06,1.0
-chr1	4936747	.	AAACAAACAAAC	.	.	.	END=4936758;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:293.25:366.612,131.36:0.0,0.0:0.0,2.01391e-08,1.0	0/0:34:1.00001:3,3:3-3,3-3:22,10,0,2:3,22:2,2:194.602:326.675,113.385:0.0,0.0:0.0,8.6363e-07,1.0
-chr1	4937389	.	AACAACAACAACAACAAC	.	.	.	END=4937406;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:6,6:6-6,6-6:31,15,0,2:6,31:5,2:276.512:366.612,131.36:0.0,0.0:0.0,3.35845e-09,1.0	0/0:45:1.0:6,6:6-6,6-6:25,13,0,6:6,25:4,2|5,4:264.154:326.675,113.385:0.0,0.0:0.0,9.31293e-08,1.0
-chr1	4938098	.	AGAAAGAAAGAA	.	.	.	END=4938109;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:218.478:366.612,131.36:0.0,0.0:0.0,2.99825e-06,1.0	0/0:18:0.999394:3,3:3-3,3-3:14,4,0,0:3,14:NULL:92.2743:326.675,113.385:0.0,0.0:1e-45,0.000270359,0.999734
-chr1	4940874	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=4940918;RU=aaaac;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.976025:9,9:8-9,8-9:9,14,0,9:9,9:2,1|3,1|4,2|5,2|6,2|8,1:234.928:366.612,131.36:0.46122,0.46122:4.70087e-25,0.0183276,0.98171	0/0:19:0.98792:9,9:9-9,9-9:10,5,0,4:9,10:3,1|5,1|6,1|7,1:119.203:326.675,113.385:0.0,0.0:6.96937e-28,0.00650601,0.993511
-chr1	4941227	.	TTGTTGTTGTTG	.	.	.	END=4941238;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:20,11,0,3:4,20:3,3:202.89:366.612,131.36:0.0,0.0:0.0,4.02136e-06,0.999995	0/0:25:0.999974:4,4:4-4,4-4:18,7,0,0:4,18:NULL:140.213:326.675,113.385:0.0,0.0:0.0,3.12652e-05,0.999971
-chr1	4941826	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=4941867;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:48:0.869733:20,21:20-22,20-22:13,22,0,12:20,7|21,4|22,2:6,1|7,1|9,1|13,2|14,1|15,2|18,1|19,2|21,1:379.236:366.612,131.36:0.575281,0.55233:1.04935e-10,0.99145,0.00856707	0/2:38:0.304313:21,26:20-22,20-27:7,17,0,13:20,3|21,4:5,1|6,1|9,2|11,1|15,2|16,1|17,1|18,1|19,1|21,1|26,1:297.187:326.675,113.385:0.393557,2.53527:5.53095e-16,0.00150292,0.998504
-chr1	4943920	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=4943943;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:0.93824:12,12:11-12,11-12:18,32,0,14:11,4|12,14:4,1|5,2|6,2|8,1|9,3|10,3|11,2:491.696:366.612,131.36:0.460582,0.460582:1.00657e-17,0.0617049,0.938387	0/0:40:0.994255:12,12:9-12,9-12:12,17,0,9:12,12:4,2|5,1|6,1|7,1|8,1|9,3:280.274:326.675,113.385:1.09539,1.09539:4.15738e-18,0.00303051,0.99698
-chr1	4944834	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=4944857;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:6,6:6-6,6-6:24,24,0,10:6,24:2,1|3,3|4,4|5,2:388.368:366.612,131.36:0.0,0.0:0.0,2.95896e-07,1.0	0/0:28:0.99596:6,6:6-6,6-6:11,13,0,4:6,11:2,1|4,2|5,1:196.374:326.675,113.385:0.0,0.0:9.78336e-31,0.00239827,0.997609
-chr1	4946471	.	ATAACATATAACATATAACAT	.	.	.	END=4946491;RU=ataacat;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:25,20,0,0:3,25:NULL:283.248:366.612,131.36:0.0,0.0:0.0,3.02506e-07,1.0	0/0:23:0.999471:3,3:3-3,3-3:14,7,0,2:3,14:2,2:133.637:326.675,113.385:0.0,0.0:2.875e-42,0.000263905,0.999736
-chr1	4957150	.	AAACAAACAAAC	.	.	.	END=4957161;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:33,12,0,2:3,33:2,2:253.018:366.612,131.36:0.0,0.0:0.0,3.93596e-10,1.0	0/0:30:1.0:3,3:3-3,3-3:25,5,0,0:3,25:NULL:146.34:326.675,113.385:0.0,0.0:0.0,1.3194e-07,1.0
-chr1	4958201	.	GAGGCAGAGGCAGAGGCA	.	.	.	END=4958218;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:33,9,0,0:3,33:NULL:219.278:366.612,131.36:0.0,0.0:0.0,5.27952e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:28,4,0,0:3,28:NULL:148.516:326.675,113.385:0.0,0.0:0.0,1.95092e-08,1.0
-chr1	4960946	.	ACACACACACACACACACACACAC	.	.	.	END=4960969;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.998459:12,12:12-13,12-13:14,14,0,5:12,14:5,2|9,2|11,1:228.619:366.612,131.36:0.19802,0.19802:9.682e-23,0.000546971,0.999454	0/0:29:0.991119:12,12:10-12,10-12:11,11,0,5:12,11:4,1|5,3|10,1:182.992:326.675,113.385:0.788731,0.788731:3.74833e-18,0.0052448,0.994768
-chr1	4967461	.	GGTGGTGGTGGT	.	.	.	END=4967472;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:4-4,4-4:30,22,0,2:4,30:3,2:335.899:366.612,131.36:0.0,0.0:0.0,5.93903e-09,1.0	0/0:38:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:231.014:326.675,113.385:0.0,0.0:0.0,2.10865e-06,1.0
-chr1	4967521	.	CTTGCTTGCTTG	.	.	.	END=4967532;RU=cttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:33,16,0,0:3,33:NULL:276.484:366.612,131.36:0.0990099,0.0990099:0.0,7.17683e-10,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:210.541:326.675,113.385:0.0,0.0:0.0,1.61021e-06,1.0
-chr1	4976938	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=4976965;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:47:0.0489368:27,27:25-29,25-29:0,17,0,29:NULL:5,2|6,2|7,3|9,2|10,1|11,1|12,1|13,3|14,2|15,1|17,3|20,1|21,2|23,2|24,1|26,1|27,1:379.606:366.612,131.36:0.896245,0.896245:0.0,0.0,1.0	0/1:64:0.794639:14,15:14-14,14-15:35,14,0,15:13,2|14,31|15,2:5,2|6,1|7,3|8,4|9,1|11,2|12,1|15,1:416.39:326.675,113.385:0.0,0.498798:1.45964e-38,2.05051e-08,1.0
-chr1	4977099	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=4977144;RU=ag;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0233624:22,22:21-26,21-26:0,9,0,9:NULL:6,1|8,1|11,1|12,2|13,2|18,1|22,1:149.084:366.612,131.36:1.98761,1.98761:0.11419,0.539167,0.346797	0/2:23:0.467761:23,24:22-24,22-24:8,11,0,4:22,2|23,4|24,2:6,1|10,1|13,1|21,1:180.98:326.675,113.385:0.479355,0.832743:0.00041485,0.339338,0.660268
-chr1	4977990	.	TCATCATCATCATCA	.	.	.	END=4978004;RU=tca;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999972:5,5:4-5,4-5:30,19,0,4:4,2|5,28:4,4:338.446:366.612,131.36:0.195027,0.195027:0.0,2.72889e-05,0.999972	0/0:31:0.999902:5,5:5-5,5-5:17,12,0,2:5,17:4,2:199.785:326.675,113.385:0.0,0.0:0.0,6.39382e-05,0.99994
-chr1	4983563	.	CATCATCATCAT	.	.	.	END=4983574;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:4,4:4-4,4-4:30,26,0,2:4,30:3,2:372.273:366.612,131.36:0.0,0.0:0.0,5.35047e-09,1.0	0/0:43:1.0:4,4:4-4,4-4:26,14,0,3:4,26:3,3:252.485:326.675,113.385:0.0,0.0:0.0,5.93857e-08,1.0
-chr1	4985196	.	TTTGTTTGTTTG	.	.	.	END=4985207;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:3,3:3-3,3-3:19,5,0,0:3,19:NULL:117.877:366.612,131.36:0.0,0.0:0.0,7.5934e-06,0.999994	0/0:44:1.0:3,3:3-3,3-3:30,11,0,3:3,30:2,3:240.878:326.675,113.385:0.0,0.0:0.0,2.65166e-09,1.0
-chr1	4996877	.	TATATATATATATATATA	TATATATATATATA	.	.	END=4996894;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.447467:7,7:5-7,5-7:4,19,0,0:7,4:NULL:192.185:366.612,131.36:0.658248,0.658248:0.876695,0.123405,3.28883e-09	0/0:15:0.909:9,9:5-9,5-9:8,6,0,0:9,8:NULL:85.502:326.675,113.385:1.94745,1.94745:2.03074e-09,0.0722748,0.92782
-chr1	4998367	.	CTCCCTCCCTCC	.	.	.	END=4998378;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:127.455:366.612,131.36:0.0,0.0:0.0,8.23697e-06,0.999994	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:148.076:326.675,113.385:0.0,0.0:0.0,9.50006e-06,0.999993
-chr1	5001697	.	TTTTGTTTTGTTTTG	.	.	.	END=5001711;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999987:3,3:3-3,3-3:19,21,0,0:3,19:NULL:274.069:366.612,131.36:0.0,0.0:0.0,1.95025e-05,0.99998	0/0:28:0.999795:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.747:326.675,113.385:0.0,0.0:0.0,0.000154956,0.999849
-chr1	5003140	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=5003167;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999859:13,13:13-13,13-13:23,24,0,3:12,2|13,21:8,1|9,1|10,1:344.393:366.612,131.36:0.0,0.0:1.0,1.05659e-06,1.4696e-27	0/0:46:0.998635:14,14:13-14,13-14:20,17,0,8:13,2|14,18:7,1|8,1|9,1|10,1|12,2|13,2:305.347:326.675,113.385:0.19802,0.19802:3.33707e-24,0.00138137,0.998625
-chr1	5005661	.	GAGGAGGAGGAG	.	.	.	END=5005672;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992028:4,4:4-4,4-4:11,11,0,0:4,11:NULL:141.326:366.612,131.36:0.0,0.0:1.67609e-36,0.00433231,0.99568	0/0:54:1.0:4,4:4-4,4-4:28,19,0,7:4,28:3,7:339.99:326.675,113.385:0.0,0.0:0.0,1.08848e-08,1.0
-chr1	5007022	.	TTTATTTTATTTTAT	.	.	.	END=5007036;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998728:3,3:3-3,3-3:13,12,0,0:3,13:NULL:164.765:366.612,131.36:0.0,0.0:1.547e-42,0.000819146,0.999187	0/0:20:0.999989:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.73:326.675,113.385:0.0,0.0:0.0,1.56403e-05,0.999986
-chr1	5008480	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=5008511;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999985:7,7:7-7,7-7:18,17,0,7:7,18:2,1|4,5|6,1:280.991:366.612,131.36:0.0,0.0:0.999987,1.30011e-05,1.28651e-33	0/0:43:1.0:8,8:8-8,8-8:20,15,0,8:8,20:3,1|4,3|5,1|6,2|7,1:279.858:326.675,113.385:0.0,0.0:0.0,5.71248e-06,0.999995
-chr1	5011517	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA	.	.	END=5011560;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.781628:21,21:20-21,20-21:10,16,0,16:20,2|21,8:4,1|5,1|6,1|7,2|8,2|11,2|14,1|15,1|16,2|17,1|18,1|19,1:329.553:366.612,131.36:0.35561,0.35561:0.986623,0.0134052,2.41062e-08	0/0:37:0.998362:22,22:22-22,22-22:14,7,0,14:22,14:5,2|8,1|13,2|14,1|17,2|18,2|20,1|21,2|22,1:244.354:326.675,113.385:0.139319,0.139319:5.65472e-23,0.000382178,0.999621
-chr1	5011684	.	AAAACAAAACAAAACAAAAC	.	.	.	END=5011703;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:4,4:4-4,4-4:17,19,0,3:4,17:2,1|3,2:265.456:366.612,131.36:0.0,0.0:0.0,4.14353e-05,0.999963	0/0:29:1.0:4,4:4-4,4-4:19,7,0,3:4,19:3,3:161.314:326.675,113.385:0.0,0.0:0.0,5.98742e-06,0.999995
-chr1	5012007	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=5012062;RU=cttt;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.0683737:10,12:1-13,1-13:0,18,0,7:NULL:5,1|6,1|7,2|8,1|12,2:219.863:366.612,131.36:3.69494,2.58175:0.597251,0.37845,0.0244016	0/0:25:0.882252:14,14:14-14,14-14:6,11,0,8:14,6:5,2|8,1|11,3|12,2:186.386:326.675,113.385:0.355334,0.355334:4.35448e-15,0.0746844,0.92541
-chr1	5013650	.	CAGAGCAGAGCAGAGCAGAGCAGAGCAGAG	CAGAGCAGAGCAGAGCAGAGCAGAG	.	.	END=5013679;RU=cagag;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999973:5,5:5-5,5-5:18,12,0,2:5,18:4,2:195.346:366.612,131.36:0.0,0.0:0.999986,1.7778e-05,5.31604e-39	0/0:32:0.925409:6,6:5-6,5-6:19,9,0,4:5,2|6,17:3,2|4,1|5,1:194.947:326.675,113.385:0.442564,0.442564:0.0,0.0746917,0.925404
-chr1	5014848	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5014891;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:0.591369:26,26:25-27,25-27:11,24,0,26:25,3|26,8:5,3|6,1|9,2|10,2|13,2|15,1|16,2|17,2|18,3|20,5|21,1|22,1|24,1:478.783:366.612,131.36:0.515042,0.515042:0.0,0.0,1.0	0/0:61:0.836759:22,22:21-23,21-23:18,23,0,18:21,3|22,12|23,3:6,1|7,1|8,1|9,1|10,2|11,2|14,1|15,1|16,1|17,3|18,1|21,3:450.295:326.675,113.385:0.661665,0.661665:1.00629e-12,0.0123263,0.987699
-chr1	5019542	.	CGCTCGCTCGCT	.	.	.	END=5019553;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:3,3:3-3,3-3:28,33,0,3:3,28:2,3:436.889:366.612,131.36:0.0,0.0:0.0,1.82732e-08,1.0	0/0:57:1.0:3,3:3-3,3-3:37,18,0,2:3,37:2,2:329.618:326.675,113.385:0.0,0.0:0.0,5.87802e-11,1.0
-chr1	5020039	.	GCCAGCCAGCCA	.	.	.	END=5020050;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:81:1.0:3,3:3-3,3-3:50,31,0,0:3,50:NULL:489.516:366.612,131.36:0.0,0.0:0.0,1.08271e-14,1.0	0/0:64:1.0:3,3:3-3,3-3:53,11,0,0:3,53:NULL:310.857:326.675,113.385:0.0,0.0:0.0,1.15808e-15,1.0
-chr1	5022514	.	TTGTTGTTGTTG	.	.	.	END=5022525;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999007:4,4:4-4,4-4:14,13,0,0:4,14:NULL:169.733:366.612,131.36:0.0,0.0:0.0,0.000700097,0.999302	0/0:32:1.00001:4,4:4-4,4-4:21,11,0,0:4,21:NULL:181.785:326.675,113.385:0.0,0.0:0.0,3.66862e-06,1.0
-chr1	5023422	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5023467;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:0.928802:18,18:17-18,17-18:20,29,0,12:17,5|18,15:5,1|6,1|8,1|10,3|11,2|12,1|13,1|14,2:459.163:366.612,131.36:0.36513,0.36513:1.0,0.0,0.0	0/0:71:0.990676:23,23:12-23,12-23:17,30,0,22:22,3|23,14:4,1|6,2|7,3|8,3|9,1|11,2|12,3|13,1|15,1|17,2|21,3:533.46:326.675,113.385:5.35709,5.35709:2.13956e-14,0.00902075,0.991
-chr1	5024078	.	AATAATAATAATAATAATAATAATAATAATAATAATAATAAT	.	.	.	END=5024119;RU=aat;PERIOD=3;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.867285:14,14:14-14,14-14:6,9,0,8:14,6:6,2|8,3|12,1|13,2:167.018:366.612,131.36:0.0,0.0:8.86682e-10,0.0435721,0.956499	0/0:21:0.719744:14,14:12-14,12-14:5,5,0,9:14,5:4,1|5,1|6,2|8,1|9,1|10,1|11,1|13,1:140.5:326.675,113.385:0.765136,0.765136:3.24644e-08,0.164517,0.835557
-chr1	5026610	.	CTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5026631;RU=ct;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:40:0.995281:9,13:9-9,12-13:10,23,0,4:9,8|13,2:4,1|7,1|10,1|12,1:294.328:366.612,131.36:0.0,0.611622:1.05571e-11,1.0,2.1268e-14	0/0:22:0.996622:11,11:11-12,11-12:12,6,0,3:11,12:8,1|10,2:129.641:326.675,113.385:0.284901,0.284901:1.52129e-18,0.00103294,0.998968
-chr1	5030577	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCC,TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=5030644;RU=tccc;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.00122163:1,1:1-1,1-1:0,2,0,0:NULL:NULL:16.7026:366.612,131.36:0.0,0.0:0.157866,0.613891,0.228323	2/2:5:0.0282725:10,10:5-10,5-10:0,0,0,4:NULL:3,1|4,1|7,1|10,1:29.1062:326.675,113.385:2.2931,2.2931:1.0,0.0,0.0
-chr1	5032870	.	CACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5032919;RU=ca;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.361478:20,26:20-22,21-26:9,14,0,16:19,2|20,7:4,1|6,2|8,1|11,1|12,1|14,1|15,1|16,1|17,3|21,1|23,2|26,1:304.689:366.612,131.36:0.352008,1.57945:6.5147e-08,1.0,5.81691e-23	0/0:37:0.652812:25,25:23-28,23-28:5,4,0,25:25,5:4,1|6,2|8,1|9,1|10,1|11,2|12,2|13,1|14,1|16,1|17,2|19,1|20,1|21,4|22,2|24,1|25,1:258.187:326.675,113.385:1.7121,1.7121:2.82121e-14,0.0563919,0.943694
-chr1	5034803	.	ACCCACCCACCC	.	.	.	END=5034814;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994095:3,3:3-3,3-3:11,14,0,0:3,11:NULL:173.794:366.612,131.36:0.0,0.0:1.24098e-32,0.00394774,0.996065	0/0:23:0.920083:3,3:3-3,3-3:7,16,0,0:3,7:NULL:173.165:326.675,113.385:0.19802,0.19802:5.54696e-21,0.0536464,0.946438
-chr1	5042658	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=5042677;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.149815:5,5:1-5,1-5:2,12,0,0:5,2:NULL:118.069:366.612,131.36:1.10262,1.10262:4.18241e-07,0.608055,0.392004	0/0:31:0.999979:5,5:5-5,5-5:19,12,0,0:5,19:NULL:191.35:326.675,113.385:0.0,0.0:0.0,2.86153e-05,0.999972
-chr1	5043950	.	GTTTGTTTGTTTGTTT	.	.	.	END=5043965;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:4,4:4-4,4-4:20,7,0,0:4,20:NULL:141.455:366.612,131.36:0.0,0.0:0.0,8.42021e-06,0.999994	0/0:45:1.00001:4,4:3-4,3-4:22,19,0,3:4,22:2,1|3,2:284.906:326.675,113.385:0.21692,0.21692:0.0,1.11147e-06,1.0
-chr1	5046122	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5046183;RU=ct;PERIOD=2;REF=31.0;EXPTHRESH=31	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0180503:26,26:26-28,26-28:0,5,0,0:NULL:NULL:44.9841:366.612,131.36:1.02378,1.02378:0.807671,0.182256,0.0101442	0/0:22:0.029794:31,31:28-34,28-34:0,11,0,9:NULL:7,1|10,1|12,1|15,2|20,2|25,1|31,1:172.568:326.675,113.385:1.12192,1.12192:1.72614e-08,0.478179,0.521908
-chr1	5046685	.	GTGGTGGTGGTG	GTGGTGGTGGTGGTG	.	.	END=5046696;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:0.830985:4,5:4-4,4-5:16,40,0,0:4,13|5,3:NULL:431.746:366.612,131.36:0.0,0.489073:2.65866e-29,4.68503e-05,0.999956	0/0:63:1.0:4,4:4-4,4-4:30,32,0,0:4,30:NULL:418.869:326.675,113.385:0.0990099,0.0990099:0.0,1.7048e-08,1.0
-chr1	5047709	.	TATATATATATATA	.	.	.	END=5047722;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997365:7,7:7-7,7-7:12,12,0,0:7,12:NULL:161.03:366.612,131.36:0.0,0.0:7.77904e-19,0.00182557,0.998178	0/0:15:0.984738:7,7:7-9,7-9:10,4,0,0:7,10:NULL:74.9247:326.675,113.385:0.922441,0.922441:4.13136e-16,0.0068031,0.993212
-chr1	5055484	.	TGCTGCTGCTGC	.	.	.	END=5055495;RU=tgc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999749:4,4:4-4,4-4:15,8,0,0:4,15:NULL:135.046:366.612,131.36:0.0,0.0:1.3e-44,0.00018649,0.999818	0/0:29:0.999993:4,4:4-4,4-4:19,10,0,0:4,19:NULL:162.768:326.675,113.385:0.0,0.0:0.0,1.46827e-05,0.999986
-chr1	5064770	.	GGCTGGCTGGCT	.	.	.	END=5064781;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.997253:3,3:3-3,3-3:11,9,0,3:3,11:2,2|3,1:146.383:366.612,131.36:0.0,0.0:2.5e-44,0.000676736,0.999325	0/0:31:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:194.449:326.675,113.385:0.0,0.0:0.0,4.37869e-05,0.999957
-chr1	5066467	.	TTTCCTTTTCCTTTTCCTTTTCCTTTTCCTTTTCCT	TTTCCTTTTCCT	.	.	END=5066502;RU=tttcct;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0731375:2,2:1-2,1-2:0,13,0,0:NULL:NULL:123.218:366.612,131.36:0.486863,0.486863:0.646631,0.326493,0.0269461	0/0:46:1.0:6,6:6-6,6-6:24,16,0,6:6,24:2,1|3,1|4,2|5,2:288.471:326.675,113.385:0.0,0.0:0.0,3.17017e-07,1.0
-chr1	5068662	.	CTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5068679;RU=ct;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.370893:17,18:15-19,15-19:2,17,0,2:17,2:17,1|18,1:185.617:366.612,131.36:1.48337,1.16983:0.0,0.0,1.0	0/0:18:0.94179:9,9:9-9,9-9:7,9,0,2:9,7:7,1|8,1:124.687:326.675,113.385:0.0,0.0:1.14451e-16,0.0254612,0.974589
-chr1	5071017	.	ATTTATTTATTT	.	.	.	END=5071028;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.192677:3,3:1-3,1-3:2,17,0,0:3,2:NULL:160.902:366.612,131.36:0.877453,0.877453:4.0823e-06,0.603197,0.396863	0/0:27:0.999334:3,3:3-3,3-3:14,13,0,0:3,14:NULL:171.023:326.675,113.385:0.0,0.0:1.43838e-40,0.000438231,0.999567
-chr1	5073289	.	CTTCCTTCCTTC	CTTCCTTC	.	.	END=5073300;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0309734:2,2:1-5,1-5:0,11,0,0:NULL:NULL:99.0037:366.612,131.36:0.808615,0.808615:0.0839852,0.432101,0.484103	0/0:27:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:146.637:326.675,113.385:0.0,0.0:0.0,2.01791e-05,0.99998
-chr1	5073332	.	CCCTCTCCCTCTCCCTCTCCCTCT	CCCTCT	.	.	END=5073355;RU=ccctct;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0763815:1,1:1-2,1-2:0,14,0,0:NULL:NULL:124.041:366.612,131.36:0.44763,0.44763:0.389388,0.484308,0.126391	1/1:6:0.0145428:1,1:1-1,1-1:0,6,0,0:NULL:NULL:50.552:326.675,113.385:0.0,0.0:0.106345,0.511468,0.38237
-chr1	5074855	.	AAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=5074870;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.991707:6,6:6-6,6-6:11,7,0,0:6,11:NULL:109.741:366.612,131.36:0.0,0.0:0.0,0.00239985,0.997608	0/0:24:0.999781:4,4:4-4,4-4:15,6,0,3:4,15:3,3:138.025:326.675,113.385:0.0,0.0:0.0,8.98934e-05,0.999911
-chr1	5075461	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5075502;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.301404:23,23:19-23,19-23:3,15,0,2:23,3:4,1|11,1:166.597:366.612,131.36:1.03975,1.03975:1.26872e-07,0.221528,0.778513	0/2:36:0.334589:21,42:21-21,21-42:16,14,0,6:20,4|21,12:8,1|13,1|14,1|19,1|20,1|42,1:275.005:326.675,113.385:0.0,10.4015:2.64187e-15,0.000464744,0.999538
-chr1	5076742	.	AAACAAAACAAAACA	.	.	.	END=5076756;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.999445:3,3:3-3,3-3:14,1,0,0:3,14:NULL:64.0851:366.612,131.36:0.0,0.0:1e-45,0.000246601,0.999757	0/0:27:0.976225:3,3:3-3,3-3:9,18,0,0:3,9:NULL:209.489:326.675,113.385:0.0,0.0:4.81057e-29,0.0183779,0.981659
-chr1	5083412	.	GGGCCGGGCCGGGCCGGGCC	.	.	.	END=5083431;RU=gggcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,16,0,6:4,28:2,2|3,4:304.674:366.612,131.36:0.0,0.0:0.0,1.98004e-08,1.0	0/0:33:0.998278:4,4:4-4,4-4:13,18,0,2:4,13:3,2:232.973:326.675,113.385:0.0,0.0:3.013e-42,0.0013592,0.998647
-chr1	5084805	.	ATGTATGTATGT	.	.	.	END=5084816;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:22,20,0,4:3,22:2,4:302.177:366.612,131.36:0.0,0.0:0.0,4.10807e-07,1.0	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.527:326.675,113.385:0.0,0.0:0.0,2.36315e-06,1.0
-chr1	5087801	.	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	CTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTC	.	.	END=5087900;RU=ctttc;PERIOD=5;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.423483:17,17:14-17,14-17:3,25,0,17:17,3:3,1|5,2|6,1|7,3|9,2|10,2|11,1|12,1|14,2|15,1|16,1:371.198:366.612,131.36:0.712734,0.712734:0.949726,0.0503559,3.15541e-13	0/0:44:0.224341:20,20:18-20,18-20:2,15,0,27:20,2:3,3|4,2|5,2|6,1|7,1|8,1|9,2|10,3|11,1|12,5|16,1|17,2|18,3:341.413:326.675,113.385:1.01397,1.01397:6.01713e-05,0.632259,0.367732
-chr1	5087905	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	END=5087943;RU=tgt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.8976:12,12:11-12,11-12:7,13,0,0:12,7:NULL:150.871:366.612,131.36:0.419363,0.419363:0.970468,0.0295872,7.15236e-11	0/0:35:0.999969:13,13:13-13,13-13:18,5,0,11:13,18:4,2|5,1|6,3|8,1|9,1|10,2|12,1:207.319:326.675,113.385:0.0,0.0:2.99767e-37,2.41469e-05,0.999978
-chr1	5089647	.	TTTATTTTATTTTAT	.	.	.	END=5089661;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.973746:3,3:3-3,3-3:9,16,0,0:3,9:NULL:185.953:366.612,131.36:0.19802,0.19802:6.29408e-30,0.0208076,0.979234	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:169.797:326.675,113.385:0.0,0.0:0.0,3.75043e-06,1.0
-chr1	5093894	.	ATTTTATTTTATTTT	.	.	.	END=5093908;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999851:3,3:3-3,3-3:16,7,0,0:3,16:NULL:127.757:366.612,131.36:0.0,0.0:9.1e-44,8.21706e-05,0.999918	0/0:33:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:210.294:326.675,113.385:0.0,0.0:0.0,2.23212e-05,0.999979
-chr1	5094712	.	ATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT	.	.	END=5094743;RU=at;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.17472:19,19:19-22,19-22:2,13,0,0:19,2:NULL:127.165:366.612,131.36:1.09834,1.09834:0.0,0.0,1.0	0/0:24:0.957031:16,16:13-16,13-16:10,12,0,0:16,10:NULL:155.669:326.675,113.385:1.06729,1.06729:4.33584e-11,0.0290692,0.970985
-chr1	5094744	.	ACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=5094759;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:29:0.998935:8,13:8-12,11-13:9,16,0,3:8,3|11,2|13,4:7,1|8,1|12,1:217.207:366.612,131.36:1.52861,0.57834:9.98027e-36,3.49991e-05,0.999964	0/0:30:0.998945:8,8:8-8,8-8:14,12,0,3:8,14:6,2|7,1:191.816:326.675,113.385:0.139319,0.139319:1.03682e-19,0.000471918,0.99953
-chr1	5094790	.	ACACACACACACAC	ACACACACACACACAC	.	.	END=5094803;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999827:8,8:8-9,8-9:17,13,0,0:8,17:NULL:188.976:366.612,131.36:0.21692,0.21692:0.0,8.64003e-05,0.999917	0/0:29:0.999462:7,7:7-7,7-7:14,11,0,4:7,14:6,1|7,3:189.759:326.675,113.385:0.0,0.0:0.0,4.86949e-05,0.999955
-chr1	5097446	.	TTTATTTATTTA	.	.	.	END=5097457;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999863:3,3:3-3,3-3:15,27,0,2:3,15:2,2:320.643:366.612,131.36:0.0,0.0:0.0,9.35685e-05,0.99991	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:155.907:326.675,113.385:0.0,0.0:0.0,4.98331e-06,0.999995
-chr1	5102138	.	ATTTTATTTTATTTTATTTT	.	.	.	END=5102157;RU=atttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999837:4,4:4-4,4-4:16,11,0,0:4,16:NULL:162.302:366.612,131.36:0.0,0.0:0.0,0.000129928,0.999872	0/0:25:0.995369:4,4:4-4,4-4:11,12,0,2:4,11:3,2:170.556:326.675,113.385:0.0,0.0:2.25603e-36,0.00291734,0.997088
-chr1	5106170	.	ATTTATTTATTT	.	.	.	END=5106181;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.993565:3,3:3-3,3-3:11,8,0,0:3,11:NULL:117.455:366.612,131.36:0.0,0.0:1.93051e-36,0.00365293,0.996354	0/0:34:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:207.406:326.675,113.385:0.0,0.0:0.0,1.2672e-05,0.999987
-chr1	5119029	.	TGTATGTATGTA	TGTATGTATGTATGTA	.	.	END=5119040;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0766832:4,4:1-4,1-4:0,20,0,2:NULL:2,2:194.997:366.612,131.36:0.648798,0.648798:0.129674,0.484023,0.38649	0/0:38:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:232.028:326.675,113.385:0.0,0.0:0.0,3.10227e-06,1.0
-chr1	5120108	.	TTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=5120132;RU=ttttg;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.999993:6,6:6-6,6-6:19,2,0,0:6,19:NULL:97.5754:366.612,131.36:0.0,0.0:0.0,8.88581e-06,0.999994	0/0:29:0.999999:5,5:5-5,5-5:18,8,0,3:5,18:4,3:172.739:326.675,113.385:0.0,0.0:0.0,7.62036e-06,0.999994
-chr1	5122238	.	ATTTTATTTTATTTT	.	.	.	END=5122252;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999732:3,3:3-3,3-3:15,14,0,0:3,15:NULL:187.866:366.612,131.36:0.0,0.0:0.0,0.000213579,0.999788	0/0:31:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:182.449:326.675,113.385:0.0,0.0:0.0,7.64385e-06,0.999994
-chr1	5124506	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT	.	.	END=5124523;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.611604:11,11:10-11,10-11:15,17,0,3:10,3|11,12:5,1|7,1|11,1:250.286:366.612,131.36:0.465241,0.465241:0.0,0.000149354,0.99985	0/0:43:0.999951:9,9:9-9,9-9:17,17,0,8:9,17:5,2|6,1|7,1|8,4:292.165:326.675,113.385:0.139319,0.139319:5.24719e-27,2.88864e-05,0.999972
-chr1	5130293	.	TTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=5130313;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.978104:8,8:8-8,8-8:9,14,0,5:8,9:3,1|5,1|6,1|7,2:202.051:366.612,131.36:0.0,0.0:1.93e-43,0.00381364,0.996195	0/0:32:0.99936:7,7:6-7,6-7:14,11,0,6:7,14:3,2|4,2|5,2:199.703:326.675,113.385:0.195027,0.195027:4.93393e-32,0.000344328,0.999659
-chr1	5131927	.	TTTATTTATTTATTTATTTATTTA	TTTATTTATTTATTTATTTATTTATTTA	.	.	END=5131950;RU=ttta;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999788:7,7:7-7,7-7:15,14,0,6:7,15:3,2|5,2|6,2:231.075:366.612,131.36:0.0,0.0:0.0,4.31738e-05,0.999957	0/0:36:1.0:6,6:6-6,6-6:23,8,0,4:6,23:3,3|5,1:195.315:326.675,113.385:0.0,0.0:0.0,5.79974e-07,1.0
-chr1	5136692	.	TAATTAATTAATTAAT	.	.	.	END=5136707;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.998591:4,4:4-4,4-4:14,24,0,0:4,14:NULL:285.967:366.612,131.36:0.0,0.0:1.12765e-38,0.0011807,0.998823	0/0:39:1.0:4,4:4-4,4-4:22,17,0,0:4,22:NULL:241.36:326.675,113.385:0.0,0.0:0.0,4.79915e-06,0.999995
-chr1	5136778	.	TTTGTTTGTTTGTTTG	.	.	.	END=5136793;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.893922:4,4:4-4,4-4:6,20,0,4:4,6:2,1|3,3:240.676:366.612,131.36:0.0990099,0.0990099:8.65602e-21,0.0682427,0.931854	0/0:44:1.0:4,4:3-4,3-4:23,16,0,4:4,23:3,4:265.691:326.675,113.385:0.169767,0.169767:0.0,3.97615e-07,1.0
-chr1	5137285	.	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAA	.	.	.	END=5137324;RU=aacaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.984495:8,8:8-8,8-8:11,22,0,5:8,11:3,1|5,3|6,1:288.126:366.612,131.36:0.29703,0.29703:2.79445e-37,0.0136302,0.9864	0/0:49:0.999985:8,8:7-8,7-8:18,19,0,11:8,18:3,2|4,1|5,3|6,2|7,3:330.796:326.675,113.385:0.311527,0.311527:0.0,2.48916e-05,0.999978
-chr1	5138729	.	AAATAAATAAAT	.	.	.	END=5138740;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999729:3,3:3-3,3-3:15,14,0,3:3,15:2,3:203.069:366.612,131.36:0.0,0.0:0.0,0.00013237,0.999871	0/0:26:0.999945:3,3:3-3,3-3:17,7,0,2:3,17:2,2:140.376:326.675,113.385:0.0,0.0:0.0,2.30953e-05,0.999979
-chr1	5139656	.	CACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5139691;RU=ca;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:27:0.833584:22,23:21-23,21-23:5,7,0,14:22,3|23,2:5,2|6,1|7,2|8,1|12,1|15,1|17,2|19,2|20,1|23,1:203.602:366.612,131.36:0.505823,0.613702:0.0,0.0,1.0	0/0:33:0.408681:18,18:17-19,17-19:15,9,0,8:17,2|18,10|19,3:8,1|9,1|10,1|12,3|14,1|17,1:223.782:326.675,113.385:0.646679,0.646679:6.46431e-13,0.00452802,0.995484
-chr1	5144394	.	TAAATAAATAAA	.	.	.	END=5144405;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99998:3,3:3-3,3-3:19,8,0,0:3,19:NULL:149.522:366.612,131.36:0.0,0.0:0.0,1.52514e-05,0.999986	0/0:36:1.0:3,3:3-3,3-3:25,9,0,2:3,25:2,2:191.591:326.675,113.385:0.0,0.0:0.0,1.22971e-07,1.0
-chr1	5144427	.	AAAAGAAAAGAAAAG	.	.	.	END=5144441;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.113:366.612,131.36:0.0,0.0:0.0,1.0044e-05,0.999993	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:164.921:326.675,113.385:0.0,0.0:0.0,7.35247e-07,1.0
-chr1	5146387	.	CTCTCTCTCTCTCT	.	.	.	END=5146400;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.919069:7,7:7-7,7-7:7,13,0,0:7,7:NULL:143.578:366.612,131.36:0.0,0.0:5.6896e-14,0.0473101,0.952768	0/0:21:0.966795:7,7:7-7,7-7:9,12,0,0:7,9:NULL:144.35:326.675,113.385:0.29703,0.29703:2.06253e-17,0.0224026,0.977639
-chr1	5151445	.	TTGTTGTTGTTG	.	.	.	END=5151456;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:25,16,0,0:4,25:NULL:244.901:366.612,131.36:0.0,0.0:0.0,3.24408e-07,1.0	0/0:37:0.999896:4,4:4-4,4-4:16,17,0,4:4,16:3,4:250.819:326.675,113.385:0.0,0.0:0.0,7.1918e-05,0.999932
-chr1	5152296	.	AAGTCAAGTCAAGTC	.	.	.	END=5152310;RU=aagtc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999903:3,3:3-3,3-3:17,21,0,0:3,17:NULL:265.343:366.612,131.36:0.0,0.0:0.0,9.4407e-05,0.999909	0/0:34:1.0:3,3:3-3,3-3:25,7,0,2:3,25:2,2:180.137:326.675,113.385:0.0,0.0:0.0,1.04653e-07,1.0
-chr1	5155085	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=5155102;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999279:6,6:5-6,5-6:26,17,0,3:5,2|6,24:5,3:300.68:366.612,131.36:0.298675,0.298675:0.0,0.000723085,0.999279	0/1:28:0.300237:6,7:6-6,6-8:15,10,0,3:6,15:5,2|7,1:186.515:326.675,113.385:0.0,0.859278:0.0,3.67236e-08,1.0
-chr1	5162575	.	TCCCCCTCCCCCTCCCCC	.	.	.	END=5162592;RU=tccccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:237.625:366.612,131.36:0.0,0.0:0.0,7.16308e-06,0.999994	0/0:25:0.99991:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.329:326.675,113.385:0.0,0.0:0.0,5.99108e-05,0.999941
-chr1	5163622	.	TCTCTCTCTCTCTCTC	TCTCTCTCTCTCTC	.	.	END=5163637;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.901722:7,7:5-7,5-7:21,18,0,0:5,2|6,2|7,17:NULL:276.157:366.612,131.36:0.847446,0.847446:1.0,2.2429e-06,1.38999e-28	0/0:35:0.988585:8,8:8-9,8-9:23,10,0,2:8,21|9,2:4,1|7,1:212.43:326.675,113.385:0.425627,0.425627:0.0,8.37333e-07,1.0
-chr1	5164581	.	TGTTTTGTTTTGTTT	.	.	.	END=5164595;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.995517:3,3:3-3,3-3:12,15,0,0:3,12:NULL:184.023:366.612,131.36:0.0,0.0:7.00488e-37,0.0035241,0.996483	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:213.3:326.675,113.385:0.0,0.0:0.0,7.12203e-08,1.0
-chr1	5170810	.	CCACCACCACCA	.	.	.	END=5170821;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:226.062:366.612,131.36:0.0,0.0:0.0,2.6812e-07,1.0	0/0:49:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:326.038:326.675,113.385:0.0,0.0:0.0,7.19001e-07,1.0
-chr1	5173050	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=5173067;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999862:6,6:6-6,6-6:16,15,0,5:6,16:3,1|4,2|5,2:240.565:366.612,131.36:0.0,0.0:0.0,6.14837e-05,0.999941	0/0:26:0.999982:6,6:6-6,6-6:18,8,0,0:6,18:NULL:144.716:326.675,113.385:0.0,0.0:0.0,2.45148e-05,0.999978
-chr1	5173130	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=5173165;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.986903:11,11:4-11,4-11:10,12,0,7:11,10:4,1|5,1|6,1|7,2|10,2:217.158:366.612,131.36:3.47918,3.47918:4.22e-43,0.00497608,0.995039	0/0:22:0.995345:9,9:8-9,8-9:11,7,0,3:9,11:4,1|8,2:133.298:326.675,113.385:0.298675,0.298675:2.13587e-23,0.0021916,0.997814
-chr1	5181851	.	TAAATAAATAAA	.	.	.	END=5181862;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.998314:3,3:3-4,3-4:13,21,0,0:3,13:NULL:237.575:366.612,131.36:0.442564,0.442564:7.37232e-40,0.00129224,0.99871	0/0:22:0.999774:3,3:3-3,3-3:15,5,0,2:3,15:2,2:116.435:326.675,113.385:0.0,0.0:0.0,8.72359e-05,0.999917
-chr1	5195638	.	GGGTGGGTGGGT	.	.	.	END=5195649;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.976028:3,3:3-3,3-3:9,19,0,0:3,9:NULL:204.429:366.612,131.36:0.0990099,0.0990099:2.21323e-26,0.0157165,0.984315	0/0:28:0.988988:3,3:3-3,3-3:10,18,0,0:3,10:NULL:206.144:326.675,113.385:0.0,0.0:1.91723e-29,0.00707587,0.992941
-chr1	5199281	.	AACAACAACAACAACAACAAC	AAC	.	.	END=5199301;RU=aac;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:44:1.00001:7,7:7-7,7-7:22,18,0,4:7,22:3,1|4,1|5,1|6,1:283.57:326.675,113.385:0.0,0.0:0.0,1.18639e-06,1.0
-chr1	5199415	.	TCAATTCAATTCAAT	TCAAT	.	.	END=5199429;RU=tcaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:173.551:326.675,113.385:0.0,0.0:0.0,7.79094e-07,1.0
-chr1	5203454	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5203499;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:19:0.616492:27,27:27-28,27-28:5,10,0,3:27,5:12,1|16,1|20,1:142.65:366.612,131.36:0.475866,0.475866:0.0,0.0,1.0	0/1:53:0.990147:23,24:8-23,8-24:16,16,0,20:21,2|22,3|23,9|24,2:4,3|6,3|7,1|8,2|9,2|11,1|13,1|15,2|16,1|19,1|20,2|24,1:398.603:326.675,113.385:6.28355,6.4573:3.53341e-14,0.00125951,0.998746
-chr1	5204415	.	AAAACAAAACAAAAC	.	.	.	END=5204429;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,22,0,0:3,24:NULL:289.691:366.612,131.36:0.0,0.0:0.0,6.84593e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:207.813:326.675,113.385:0.0,0.0:0.0,1.32214e-06,1.0
-chr1	5206150	.	TATTATTATTAT	.	.	.	END=5206161;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:24,19,0,2:4,24:3,2:280.676:366.612,131.36:0.0,0.0:0.0,4.49774e-07,1.0	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:179.209:326.675,113.385:0.0,0.0:0.0,5.83942e-06,0.999995
-chr1	5209488	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=5209507;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:5,5:5-5,5-5:24,25,0,3:5,24:4,1|5,2:342.299:366.612,131.36:0.0,0.0:0.0,2.93501e-07,1.0	0/0:50:1.0:5,5:5-5,5-5:29,17,0,4:5,29:2,2|3,1|4,1:305.847:326.675,113.385:0.0,0.0:0.0,1.4108e-08,1.0
-chr1	5212542	.	AATAAATAAATA	.	.	.	END=5212553;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:29,21,0,0:3,29:NULL:302.188:366.612,131.36:0.0,0.0:0.0,6.61937e-09,1.0	0/0:30:0.999534:3,3:3-3,3-3:14,16,0,0:3,14:NULL:200.165:326.675,113.385:0.0,0.0:5e-44,0.000297945,0.999705
-chr1	5214463	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5214514;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.179791:38,38:22-39,22-39:2,16,0,22:38,2:7,2|8,1|10,1|12,1|13,1|19,1|20,1|21,1|22,3|24,2|25,1|27,1|28,1|29,1|30,1|33,1|35,1|37,1:332.766:366.612,131.36:8.03867,8.03867:0.0,0.00525894,0.994754	0/0:55:0.816593:26,26:22-26,22-26:8,24,0,22:25,2|26,6:5,2|6,1|8,1|10,2|12,2|14,2|15,1|16,1|17,2|20,1|21,3|22,1|23,1|24,1|26,1:439.895:326.675,113.385:1.52231,1.52231:7.61869e-14,0.109333,0.890764
-chr1	5214858	.	ACAAACAAACAAACAAACAAACAA	ACAAACAAACAAACAAACAAACAAACAA	.	.	END=5214881;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999981:7,7:7-7,7-7:18,16,0,6:7,18:4,1|5,1|6,4:263.817:366.612,131.36:0.0,0.0:0.0,1.96046e-06,1.0	0/0:44:1.0:6,6:6-6,6-6:32,6,0,6:6,32:3,1|4,2|5,3:227.028:326.675,113.385:0.0,0.0:0.0,7.81639e-10,1.0
-chr1	5215016	.	AAACAAACAAACAAAC	.	.	.	END=5215031;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999931:4,4:4-4,4-4:17,22,0,3:4,17:3,3:296.386:366.612,131.36:0.0,0.0:0.0,6.34682e-05,0.99994	0/0:34:0.999896:4,4:4-4,4-4:16,14,0,4:4,16:3,4:222.896:326.675,113.385:0.0,0.0:0.0,5.2001e-05,0.999949
-chr1	5215414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=5215441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.0337407:6,6:6-8,6-8:0,4,0,0:NULL:NULL:33.8497:366.612,131.36:0.950082,0.950082:0.12587,0.46186,0.412459	0/0:36:0.999947:7,7:6-7,6-7:17,11,0,7:7,17:3,1|5,2|6,4:222.254:326.675,113.385:0.35561,0.35561:0.0,2.25514e-05,0.999979
-chr1	5215633	.	GTTTTTTTGTTTTTTTGTTTTTTT	GTTTTTTT	.	.	END=5215656;RU=gttttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0699749:1,1:1-1,1-1:0,8,0,0:NULL:NULL:71.2298:366.612,131.36:0.0,0.0:0.161111,0.542501,0.296497	0/0:19:0.929627:3,3:3-3,3-3:7,12,0,0:3,7:NULL:137.474:326.675,113.385:0.0,0.0:4.70423e-20,0.051824,0.948258
-chr1	5222650	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5222685;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:37:0.999975:14,18:14-15,15-25:15,18,0,3:14,8|15,2|18,5:8,1|10,1|13,1:265.085:366.612,131.36:1.09602,1.47222:1.35483e-06,1.0,1.7173e-11	0/0:31:0.591313:18,18:7-20,7-20:12,7,0,8:17,3|18,9:5,1|7,2|9,1|11,1|12,1|13,2:186.063:326.675,113.385:3.56991,3.56991:4.53689e-11,0.404719,0.595353
-chr1	5222686	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5222719;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0157724:29,29:15-32,15-32:0,16,0,9:NULL:8,1|9,2|11,1|12,2|15,1|25,1|28,1:217.563:366.612,131.36:7.10125,7.10125:1.02035e-15,0.221213,0.778826	0/0:26:0.988323:17,17:12-17,12-17:10,9,0,6:17,10:6,3|12,1|16,1|17,1:168.324:326.675,113.385:2.15787,2.15787:1.15349e-24,0.00401421,0.995997
-chr1	5223713	.	TTTGTTTGTTTG	.	.	.	END=5223724;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:25,19,0,2:3,25:2,2:291.821:366.612,131.36:0.0,0.0:0.0,7.77745e-08,1.0	0/0:34:0.999719:3,3:3-3,3-3:15,19,0,0:3,15:NULL:235.265:326.675,113.385:0.0,0.0:6e-45,0.000233093,0.999767
-chr1	5224486	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	END=5224521;RU=ttcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.737032:15,15:4-15,4-15:6,15,0,8:15,6:2,1|5,1|8,1|10,1|13,1|14,3:230.197:366.612,131.36:3.75682,3.75682:0.0,0.0851395,0.914956	0/0:25:0.999249:9,9:8-9,8-9:14,10,0,0:9,14:NULL:153.745:326.675,113.385:0.270063,0.270063:5.5024e-40,0.000564618,0.999438
-chr1	5225503	.	TTTATTTATTTATTTATTTA	.	.	.	END=5225522;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.00001:5,5:5-5,5-5:22,25,0,5:5,22:2,2|3,2|4,1:355.417:366.612,131.36:0.0,0.0:0.0,2.06382e-06,1.0	0/0:41:0.999991:5,5:5-5,5-5:18,15,0,8:5,18:2,1|3,3|4,4:267.129:326.675,113.385:0.0,0.0:0.0,1.16671e-05,0.999987
-chr1	5225865	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5225896;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:80:0.347947:22,29:21-22,21-29:15,34,0,28:21,6|22,9:5,2|6,1|8,1|9,1|10,1|11,1|12,1|13,2|14,4|15,1|16,3|17,3|18,1|19,1|21,4|29,1:621.824:366.612,131.36:0.236383,3.71225:0.0,0.0,1.0	0/0:31:0.378564:16,16:13-16,13-16:8,12,0,9:15,3|16,5:5,1|7,1|8,1|9,1|11,1|12,3|16,1:226.415:326.675,113.385:0.967363,0.967363:9.83265e-13,0.604702,0.395359
-chr1	5228543	.	TTTATTTATTTA	.	.	.	END=5228554;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:28,12,0,4:3,28:2,3|3,1:251.392:366.612,131.36:0.0,0.0:0.0,7.3749e-09,1.0	0/0:32:0.999984:3,3:3-3,3-3:18,14,0,0:3,18:NULL:201.611:326.675,113.385:0.0,0.0:0.0,2.33616e-05,0.999979
-chr1	5232603	.	TAATAATAATAA	.	.	.	END=5232614;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:4,4:4-4,4-4:23,9,0,0:4,23:NULL:168.543:366.612,131.36:0.0,0.0:0.0,1.06949e-06,1.0	0/0:24:1.0:4,4:4-4,4-4:20,4,0,0:4,20:NULL:116.086:326.675,113.385:0.0,0.0:0.0,5.85088e-06,0.999995
-chr1	5237129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=5237166;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.813959:19,19:18-19,18-19:7,10,0,2:19,7:7,1|11,1:145.291:366.612,131.36:0.374147,0.374147:2.06632e-09,0.114796,0.885306	0/0:34:0.996205:19,19:10-19,10-19:17,7,0,8:18,2|19,15:10,1|11,1|14,1|15,1|16,1|17,2|18,1:205.591:326.675,113.385:3.76193,3.76193:5.78756e-18,0.00365141,0.99636
-chr1	5237829	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT,TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5237896;RU=ttct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0416806:19,19:14-21,14-21:0,8,0,8:NULL:4,1|5,1|6,2|12,1|14,1|17,1|18,1:130.054:366.612,131.36:1.80051,1.80051:3.71072e-16,0.376297,0.623757	1/1:37:0.762862:18,18:17-18,17-18:5,14,0,17:18,5:5,2|6,2|8,3|9,1|10,2|11,1|12,1|13,1|15,2|16,1|17,1:276.605:326.675,113.385:0.494455,0.494455:4.1147e-18,0.076631,0.923462
-chr1	5248663	.	ACCACCACCACC	.	.	.	END=5248674;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:4,4:4-4,4-4:40,16,0,0:4,40:NULL:299.265:366.612,131.36:0.0,0.0:0.0,8.09204e-12,1.0	0/0:54:1.0:4,4:4-4,4-4:32,18,0,4:4,32:3,4:326.504:326.675,113.385:0.0,0.0:0.0,7.37035e-10,1.0
-chr1	5256153	.	GAGCAAGAGCAAGAGCAA	.	.	.	END=5256170;RU=gagcaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999993:3,3:3-3,3-3:19,8,0,0:3,19:NULL:143.436:366.612,131.36:0.0,0.0:2.84919e-36,1.28151e-05,0.999987	0/0:48:1.0:3,3:3-3,3-3:34,14,0,0:3,34:NULL:269.734:326.675,113.385:0.0,0.0:0.0,9.40678e-10,1.0
-chr1	5258418	.	CACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5258457;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:64:0.49556:22,24:22-22,8-28:24,16,0,20:21,6|22,18:5,1|10,1|11,1|13,1|14,1|15,1|16,5|17,3|18,1|19,1|20,2|22,1|24,1:437.329:366.612,131.36:0.0,6.46634:0.0,4.22087e-09,1.0	0/0:101:1.0:20,20:20-20,20-20:47,24,0,30:19,7|20,38|21,2:4,1|5,2|6,2|7,1|8,1|9,3|10,2|12,1|14,2|15,2|16,3|17,2|18,1|19,5|20,2:681.747:326.675,113.385:0.0990099,0.0990099:0.0,9.9887e-08,1.0
-chr1	5258712	.	GTTTGTTTGTTTGTTTGTTT	.	.	.	END=5258731;RU=gttt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:5,5:2-5,2-5:32,19,0,7:5,32:2,1|3,2|4,4:353.064:366.612,131.36:0.5093,0.5093:0.0,8.45447e-10,1.0	0/0:51:0.999986:5,5:4-5,4-5:31,17,0,3:4,2|5,29:3,1|4,2:311.605:326.675,113.385:0.298675,0.298675:0.0,1.61664e-05,0.999986
-chr1	5259167	.	GAGAGAGAGAGAGAGAGA	.	.	.	END=5259184;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997238:9,9:8-9,8-9:22,12,0,0:8,3|9,19:NULL:205.731:366.612,131.36:0.253975,0.253975:1.4656e-32,0.00277942,0.99723	0/0:36:0.992784:9,9:8-9,8-9:21,12,0,3:8,3|9,18:5,1|7,1|8,1:222.927:326.675,113.385:0.298675,0.298675:1.90519e-30,0.00723947,0.992776
-chr1	5260536	.	AGAGAGAGAGAG	.	.	.	END=5260547;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:6,6:6-6,6-6:24,15,0,3:6,24:4,1|5,2:257.581:366.612,131.36:0.0,0.0:0.0,3.27837e-07,1.0	0/0:41:1.0:6,6:6-6,6-6:27,11,0,2:6,27:4,1|5,1:221.878:326.675,113.385:0.139319,0.139319:0.0,3.43838e-08,1.0
-chr1	5261841	.	ACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCACACCCTGTGAGGGGAGCAC	.	.	.	END=5261894;RU=accctgtgaggggagcac;PERIOD=18;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.989161:3,3:3-3,3-3:12,25,0,3:3,12:2,3:307.882:366.612,131.36:0.19802,0.19802:1.21564e-13,0.0108002,0.989224	0/0:26:0.457035:3,3:1-3,1-3:8,18,0,0:3,8:NULL:212.032:326.675,113.385:0.982146,0.982146:1.46782e-08,0.542026,0.458084
-chr1	5274498	.	CACACACACACACACACACACACACACACA	.	.	.	END=5274527;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.827913:15,15:12-16,12-16:14,11,0,4:14,3|15,11:5,1|10,1|13,2:198.033:366.612,131.36:1.07834,1.07834:8.4421e-11,0.171242,0.828827	0/0:49:0.999387:15,15:14-15,14-15:20,18,0,9:14,2|15,18:4,2|5,2|10,1|11,1|14,3:327.507:326.675,113.385:0.290354,0.290354:1.052e-19,0.000612737,0.999392
-chr1	5275399	.	CCAACCAACCAACCAA	.	.	.	END=5275414;RU=ccaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.992288:4,4:4-4,4-4:10,26,0,2:4,10:3,2:288.018:366.612,131.36:0.29703,0.29703:1.16967e-32,0.00604591,0.99397	0/0:24:0.999116:4,4:3-4,3-4:14,9,0,0:4,14:NULL:137.796:326.675,113.385:0.412766,0.412766:4e-45,0.000609573,0.999393
-chr1	5277383	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5277428;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.898518:12,21:12-21,20-21:11,10,0,7:12,2|20,4|21,5:5,1|7,1|9,1|10,3|14,1:208.996:366.612,131.36:3.65753,0.35561:1.0,3.34413e-09,4.59526e-18	0/0:31:0.947523:23,23:22-23,22-23:11,11,0,8:22,2|23,9:5,1|7,1|8,1|16,2|17,3:221.047:326.675,113.385:0.335467,0.335467:4.2736e-11,0.0337459,0.966317
-chr1	5287020	.	CTTTCTTTCTTT	.	.	.	END=5287031;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999962:3,3:3-3,3-3:18,16,0,0:3,18:NULL:226.214:366.612,131.36:0.0,0.0:0.0,4.26436e-05,0.999957	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:182.96:326.675,113.385:0.0,0.0:0.0,2.75502e-06,1.0
-chr1	5287167	.	CACTCACTCACT	.	.	.	END=5287178;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.997619:3,3:3-3,3-3:13,17,0,0:3,13:NULL:209.212:366.612,131.36:0.0,0.0:2.217e-42,0.00140441,0.998602	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:222.996:326.675,113.385:0.0,0.0:0.0,9.17748e-07,1.0
-chr1	5292757	.	TATTTATTTATTTATT	.	.	.	END=5292772;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:4,4:4-4,4-4:24,28,0,5:4,24:3,5:381.227:366.612,131.36:0.0,0.0:0.0,2.152e-07,1.0	0/0:45:1.0:4,4:4-4,4-4:31,12,0,2:4,31:2,1|3,1:249.227:326.675,113.385:0.0,0.0:0.0,2.36608e-09,1.0
-chr1	5293618	.	ACCCACCCACCC	.	.	.	END=5293629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.286812:3,3:1-4,1-4:2,5,0,0:3,2:NULL:56.0438:366.612,131.36:0.4771,0.4771:6.95321e-07,0.320178,0.679833	0/0:33:0.997083:3,3:3-3,3-3:11,20,0,2:3,11:2,2:235.353:326.675,113.385:0.0,0.0:1.65754e-32,0.00180725,0.9982
-chr1	5296079	.	TCTCTCTCTCTC	TCTCTCTCTC	.	.	END=5296090;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.999768:5,6:5-6,6-6:23,7,0,0:5,6|6,17:NULL:167.987:366.612,131.36:0.323567,0.0:3.67971e-28,0.999766,0.000235612	0/0:41:1.0:6,6:4-6,4-6:24,16,0,0:6,24:NULL:243.658:326.675,113.385:0.339533,0.339533:0.0,1.01115e-06,1.0
-chr1	5297215	.	TTATTATTATTA	.	.	.	END=5297226;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:68:1.0:4,4:4-4,4-4:30,36,0,2:4,30:3,2:473.448:366.612,131.36:0.0,0.0:0.0,3.80989e-08,1.0	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:285.39:326.675,113.385:0.0,0.0:0.0,6.96663e-09,1.0
-chr1	5301831	.	AAAGAAAGAAAG	.	.	.	END=5301842;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,20,0,0:3,29:NULL:294.546:366.612,131.36:0.0,0.0:0.0,7.70578e-09,1.0	0/0:42:1.00001:3,3:3-3,3-3:22,20,0,0:3,22:NULL:269.307:326.675,113.385:0.0,0.0:0.0,2.30349e-06,1.0
-chr1	5303346	.	TTTGTTTGTTTGTTTG	.	.	.	END=5303361;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.997585:4,4:4-4,4-4:13,20,0,0:4,13:NULL:228.538:366.612,131.36:0.0,0.0:1e-42,0.00188801,0.998117	0/0:31:0.999824:4,4:4-4,4-4:15,10,0,6:4,15:3,6:189.096:326.675,113.385:0.0,0.0:0.0,7.15698e-05,0.999932
-chr1	5303465	.	TAGGTAGGTAGG	.	.	.	END=5303476;RU=tagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:179.066:366.612,131.36:0.0,0.0:0.0,4.32502e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:27,5,0,3:3,27:2,3:170.725:326.675,113.385:0.0,0.0:0.0,1.88107e-08,1.0
-chr1	5304109	.	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	CAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCAAAG	.	.	END=5304158;RU=caaag;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.990926:11,11:11-11,11-11:10,24,0,9:11,10:4,2|5,1|7,1|8,3|9,1|10,1:325.961:366.612,131.36:0.0,0.0:4e-45,0.00453009,0.995484	0/0:34:0.999662:10,10:6-10,6-10:16,13,0,4:10,16:2,1|6,2|9,1:221.236:326.675,113.385:1.8278,1.8278:0.0,0.000306716,0.999697
-chr1	5305886	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5305925;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:54:0.338605:20,37:20-20,19-37:16,21,0,16:19,5|20,11:6,1|8,2|10,3|11,1|12,1|13,2|16,2|17,1|18,1|19,1|36,1:415.777:366.612,131.36:0.0,8.43581:1.53622e-12,0.00330418,0.996707	0/1:53:0.357551:20,24:20-20,10-24:17,18,0,14:19,6|20,11:6,1|7,3|8,2|9,2|13,1|14,1|17,1|18,1|20,1|24,1:379.134:326.675,113.385:0.139319,5.17495:3.42354e-19,0.00235956,0.997647
-chr1	5306965	.	ATCATCATCATC	.	.	.	END=5306976;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:29,9,0,0:4,29:NULL:194.503:366.612,131.36:0.0,0.0:0.0,1.60491e-08,1.0	0/0:50:1.0:4,4:4-4,4-4:29,16,0,5:4,29:3,5:297.402:326.675,113.385:0.0,0.0:0.0,8.0037e-09,1.0
-chr1	5312273	.	TCTCTCTCTCTCTCTC	.	.	.	END=5312288;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.987404:8,8:6-8,6-8:26,9,0,0:6,4|7,2|8,20:NULL:212.78:366.612,131.36:0.850448,0.850448:1.5683e-41,0.0126277,0.987401	0/0:31:0.99995:8,8:8-9,8-9:22,4,0,3:7,2|8,20:5,2|6,1:155.316:326.675,113.385:0.39604,0.39604:4.36e-43,6.0267e-05,0.999941
-chr1	5312289	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5312324;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:43:0.868327:17,18:17-17,17-20:13,14,0,15:16,2|17,9|18,2:5,2|9,1|11,2|12,2|15,4|16,4:320.234:366.612,131.36:0.417958,1.14937:0.120619,0.879405,7.83593e-05	0/0:34:0.981324:18,18:17-19,17-19:15,4,0,14:17,3|18,12:5,2|6,1|7,1|9,2|10,2|11,1|14,2|16,1|17,2:221.142:326.675,113.385:0.393557,0.393557:4.0892e-18,0.016289,0.983747
-chr1	5312324	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5312357;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999867:17,17:17-19,17-19:17,19,0,3:17,17:5,1|8,1|11,1:278.5:366.612,131.36:0.507951,0.507951:3.43283e-35,6.11318e-05,0.999941	0/0:33:0.869753:17,17:16-17,16-17:17,9,0,7:16,3|17,14:4,1|8,3|13,1|16,2:218.032:326.675,113.385:0.419363,0.419363:3.86306e-25,0.13016,0.869937
-chr1	5318871	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=5318898;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.960449:19,19:17-19,17-19:13,14,0,7:18,2|19,11:7,1|9,1|10,2|12,1|13,1|15,1:251.315:366.612,131.36:0.628225,0.628225:0.0,0.0,1.0	0/0:38:0.999671:14,14:14-14,14-14:16,10,0,11:14,16:4,1|5,1|7,1|8,1|9,1|11,2|12,2|13,2:246.933:326.675,113.385:0.0,0.0:1.71366e-21,0.00011102,0.999888
-chr1	5327635	.	CTCTTTCCCTCTTTCCCTCTTTCC	CTCTTTCC	.	.	END=5327658;RU=ctctttcc;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.325739:1,1:1-3,1-3:0,19,0,0:NULL:NULL:172.932:366.612,131.36:0.978146,0.978146:0.565034,0.384922,0.0501882	0/0:25:0.985248:3,3:3-3,3-3:10,15,0,0:3,10:NULL:176.475:326.675,113.385:0.19802,0.19802:5.32981e-25,0.013287,0.986741
-chr1	5333023	.	TATATATATATATATA	TATATATATATATATATATATA	.	.	END=5333038;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.441393:11,11:10-13,10-13:9,9,0,0:10,2|11,7:NULL:122.896:366.612,131.36:1.11059,1.11059:1.78662e-29,0.0036561,0.996353	0/0:8:0.802531:8,8:8-8,8-8:6,2,0,0:8,6:NULL:42.6017:326.675,113.385:0.0,0.0:6.33462e-08,0.0949859,0.905114
-chr1	5334011	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5334042;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.702044:19,20:19-21,19-21:7,12,0,13:19,3|20,4:6,2|7,1|8,4|9,1|12,1|13,2|14,2:248.604:366.612,131.36:0.830386,0.473387:0.0,0.0,1.0	0/0:22:0.991203:16,16:16-16,16-16:14,4,0,4:15,2|16,12:5,1|10,1|13,1|15,1:131.76:326.675,113.385:0.139319,0.139319:1.15746e-14,0.00625518,0.99376
-chr1	5337377	.	TTTATTTATTTA	.	.	.	END=5337388;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,16,0,0:3,24:NULL:237.645:366.612,131.36:0.0,0.0:0.0,6.40429e-07,1.0	0/0:33:0.999985:3,3:3-3,3-3:18,15,0,0:3,18:NULL:202.756:326.675,113.385:0.0,0.0:0.0,2.36752e-05,0.999979
-chr1	5340739	.	TATTTATTTATT	.	.	.	END=5340750;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999984:3,3:3-3,3-3:18,7,0,0:3,18:NULL:134.707:366.612,131.36:0.0,0.0:0.0,1.97523e-05,0.99998	0/0:16:0.983407:3,3:3-3,3-3:9,5,0,2:3,9:2,2:96.8479:326.675,113.385:0.0,0.0:4.01017e-31,0.00686109,0.993158
-chr1	5341947	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	.	END=5341974;RU=aagg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99808:7,7:7-7,7-7:13,15,0,3:7,13:2,1|4,1|6,1:218.78:366.612,131.36:0.0,0.0:7.99043e-36,0.0014034,0.998602	0/0:27:0.979243:7,7:6-7,6-7:9,15,0,2:7,9:6,2:192.077:326.675,113.385:0.442564,0.442564:5.8151e-25,0.0143806,0.985652
-chr1	5357169	.	GGGTGGGTGGGT	.	.	.	END=5357180;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.608255:3,3:3-3,3-3:4,11,0,0:3,4:NULL:112.0:366.612,131.36:0.19802,0.19802:2.62201e-11,0.214101,0.785943	0/0:33:0.984164:3,3:3-3,3-3:9,24,0,0:3,9:NULL:245.497:326.675,113.385:0.0,0.0:2.5687e-24,0.0106184,0.989403
-chr1	5365050	.	CCTCCCTCCCTC	.	.	.	END=5365061;RU=cctc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:31,22,0,0:3,31:NULL:322.918:366.612,131.36:0.0,0.0:0.0,4.07982e-09,1.0	0/0:38:1.0:3,3:3-3,3-3:27,9,0,2:3,27:2,2:205.87:326.675,113.385:0.0,0.0:0.0,1.47401e-08,1.0
-chr1	5368230	.	CTCTTGCGCTCTTGCGCTCTTGCGCTCTTGCG	CTCTTGCGCTCTTGCGCTCTTGCG	.	.	END=5368261;RU=ctcttgcg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.882176:3,3:3-11,3-11:20,27,0,2:3,20:2,1|11,1:362.233:366.612,131.36:3.12646,3.12646:0.882095,0.118006,0.0	0/0:36:0.999916:4,4:4-4,4-4:16,17,0,3:4,16:3,3:243.009:326.675,113.385:0.0,0.0:0.0,8.91984e-05,0.999911
-chr1	5368294	.	CTTGCACTCTTGCACTCTTGCACT	.	.	.	END=5368317;RU=cttgcact;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.997641:3,3:3-3,3-3:14,25,0,0:3,14:NULL:292.044:366.612,131.36:0.0,0.0:2.19494e-38,0.002326,0.997678	0/0:35:0.999965:3,3:3-3,3-3:18,17,0,0:3,18:NULL:235.837:326.675,113.385:0.0,0.0:0.0,4.25038e-05,0.999957
-chr1	5369349	.	GTTTGTTTGTTT	.	.	.	END=5369360;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:19,13,0,0:3,19:NULL:193.077:366.612,131.36:0.0,0.0:0.0,7.50507e-06,0.999994	0/0:21:0.999752:3,3:3-3,3-3:15,4,0,2:3,15:2,2:112.933:326.675,113.385:0.0,0.0:0.0,8.85613e-05,0.999911
-chr1	5369470	.	ATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT	.	.	END=5369505;RU=at;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:17:0.65517:13,13:13-14,13-14:5,11,0,0:13,5:NULL:125.134:366.612,131.36:0.44763,0.44763:1.0,0.0,0.0	1/1:8:0.0133204:12,12:15-19,15-19:0,5,0,0:NULL:NULL:47.5052:326.675,113.385:1.68323,1.68323:0.354018,0.483083,0.162943
-chr1	5374204	.	TTTGTTTGTTTGTTTG	.	.	.	END=5374219;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999829:4,4:3-4,3-4:16,13,0,0:4,16:NULL:181.117:366.612,131.36:0.390807,0.390807:0.0,0.000140681,0.999864	0/0:21:0.999914:4,4:4-4,4-4:17,4,0,0:4,17:NULL:104.508:326.675,113.385:0.0,0.0:0.0,5.65094e-05,0.999947
-chr1	5380595	.	ACACACACACAC	.	.	.	END=5380606;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.995403:6,6:6-6,6-6:11,12,0,0:6,11:NULL:153.893:366.612,131.36:0.0,0.0:6.47033e-27,0.00291211,0.997095	0/0:36:1.0:6,6:6-6,6-6:23,13,0,0:6,23:NULL:210.926:326.675,113.385:0.0,0.0:0.0,8.84609e-07,1.0
-chr1	5380856	.	TCTGTCTGTCTG	.	.	.	END=5380867;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:33,15,0,0:3,33:NULL:268.978:366.612,131.36:0.0,0.0:0.0,8.82469e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:30,12,0,2:3,30:2,2:243.845:326.675,113.385:0.0,0.0:0.0,3.59975e-09,1.0
-chr1	5380890	.	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5380943;RU=ca;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:55:0.293781:21,25:21-21,21-28:16,16,0,23:20,2|21,14:7,2|8,1|9,2|11,1|12,2|13,1|14,2|16,1|17,1|18,1|19,2|20,4|21,1|23,1|25,1:422.02:366.612,131.36:0.0,1.90161:0.574979,0.425105,0.0	0/0:43:0.937524:27,27:18-27,18-27:8,15,0,18:27,8:7,1|9,1|11,2|12,1|13,1|14,1|17,2|18,1|22,3|23,1|25,3|26,1:317.864:326.675,113.385:4.08564,4.08564:5.81294e-08,0.0327406,0.967321
-chr1	5382870	.	GAGGAAGAGGAAGAGGAA	.	.	.	END=5382887;RU=gaggaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.00001:3,3:3-3,3-3:21,18,0,6:3,21:2,6:284.486:366.612,131.36:0.0,0.0:0.0,1.09993e-06,1.0	0/0:34:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:197.584:326.675,113.385:0.0,0.0:0.0,2.89385e-06,1.0
-chr1	5384698	.	AGAAAGAAAGAAAGAA	.	.	.	END=5384713;RU=agaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.951299:4,4:4-4,4-4:8,1,0,0:4,8:NULL:42.0356:366.612,131.36:0.0,0.0:8.24126e-27,0.0253717,0.974677	0/0:13:0.994208:4,4:3-4,3-4:11,1,0,0:4,11:NULL:52.2596:326.675,113.385:0.452422,0.452422:1.09039e-36,0.00304955,0.996958
-chr1	5384783	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=5384850;RU=ga;PERIOD=2;REF=34.0;EXPTHRESH=34	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0170297:37,37:25-38,25-38:0,6,0,7:NULL:5,1|15,1|17,1|18,1|21,1|25,1|37,1:109.943:366.612,131.36:4.88194,4.88194:9.74187e-08,0.688895,0.311118	1/1:10:0.00722649:26,26:24-35,24-35:0,3,0,4:NULL:5,1|8,1|13,1|15,1:59.5948:326.675,113.385:2.9505,2.9505:0.523716,0.401562,0.0748556
-chr1	5384864	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA,AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	END=5384923;RU=agaa;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:24:0.811644:14,14:14-14,14-14:5,12,0,7:14,5:5,1|7,2|10,2|13,1|14,1:181.954:366.612,131.36:0.0,0.0:0.884619,0.115484,8.42783e-10	1/0:18:0.995891:13,15:13-15,15-15:7,6,0,5:13,2|15,5:7,1|9,1|12,2|13,1:128.201:326.675,113.385:0.825531,0.0:1.40358e-11,0.996498,0.00350955
-chr1	5390035	.	CCTCCTCCTCCT	.	.	.	END=5390046;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:30,20,0,0:4,30:NULL:303.92:366.612,131.36:0.0,0.0:0.0,1.00316e-08,1.0	0/0:42:1.0:4,4:3-4,3-4:25,13,0,3:4,25:3,3:233.407:326.675,113.385:0.21692,0.21692:0.0,8.32903e-08,1.0
-chr1	5391563	.	TTTCTTTCTTTC	.	.	.	END=5391574;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:20,19,0,3:3,20:2,3:279.261:366.612,131.36:0.0,0.0:0.0,3.85061e-06,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.858:326.675,113.385:0.0,0.0:0.0,2.44321e-06,1.0
-chr1	5393656	.	TTTATTTATTTA	.	.	.	END=5393667;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:212.9:366.612,131.36:0.0,0.0:0.0,3.37619e-07,1.0	0/0:22:0.99984:3,3:3-3,3-3:16,6,0,0:3,16:NULL:119.896:326.675,113.385:0.0,0.0:0.0,8.31027e-05,0.999918
-chr1	5400536	.	GGGGTGGGGGTGGGGGTG	.	.	.	END=5400553;RU=ggggtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.952146:3,3:2-3,2-3:8,22,0,2:3,8:2,2:250.206:366.612,131.36:0.309,0.309:3.00685e-21,0.0377962,0.962271	0/0:22:0.986756:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.634:326.675,113.385:0.0,0.0:5.56677e-27,0.00952345,0.990499
-chr1	5400652	.	TAAATAAATAAATAAA	.	.	.	END=5400667;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999912:4,4:4-4,4-4:18,18,0,0:4,18:NULL:240.227:366.612,131.36:0.0,0.0:0.0,8.34338e-05,0.999918	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:169.93:326.675,113.385:0.0,0.0:0.0,2.37959e-06,1.0
-chr1	5401591	.	CAAACAAACAAACAAACAAA	.	.	.	END=5401610;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:20,21,0,2:5,20:3,1|4,1:287.227:366.612,131.36:0.0,0.0:0.0,1.04435e-05,0.999993	0/0:34:0.998896:5,5:4-5,4-5:15,18,0,0:5,15:NULL:226.268:326.675,113.385:0.284901,0.284901:5.5e-44,0.00102301,0.998982
-chr1	5407272	.	AATAAATAAATAAATA	.	.	.	END=5407287;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:33,17,0,2:4,33:3,2:299.722:366.612,131.36:0.0,0.0:0.0,6.38711e-10,1.0	0/0:56:1.0:4,4:4-4,4-4:32,20,0,4:4,32:2,2|3,1|4,1:340.155:326.675,113.385:0.0,0.0:0.0,1.50266e-09,1.0
-chr1	5411524	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5411557;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:0.878383:17,17:12-17,12-17:26,17,0,21:16,8|17,18:5,2|7,3|9,2|10,2|12,4|13,4|15,3|16,1:447.231:366.612,131.36:1.11306,1.11306:1.04022e-17,0.121721,0.878381	0/0:56:0.900944:17,17:16-17,16-17:21,16,0,19:16,6|17,15:4,1|5,3|6,1|9,1|10,4|11,1|12,2|13,1|14,2|15,3:398.882:326.675,113.385:0.437216,0.437216:2.70896e-15,0.0991223,0.900982
-chr1	5412318	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=5412335;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.340536:9,9:7-10,7-10:16,7,0,0:7,2|9,12|10,2:NULL:147.298:366.612,131.36:1.18233,1.18233:5.7347e-20,0.61885,0.381204	0/0:22:0.999588:9,9:9-9,9-9:15,5,0,2:9,15:7,2:121.002:326.675,113.385:0.0,0.0:1.725e-24,0.000183454,0.999819
-chr1	5412585	.	GCAGGCAGGCAG	.	.	.	END=5412596;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:29,11,0,2:3,29:2,2:231.295:366.612,131.36:0.0,0.0:0.0,5.35748e-09,1.0	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:141.585:326.675,113.385:0.0,0.0:0.0,5.03885e-06,0.999995
-chr1	5414201	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5414252;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.277101:22,30:21-22,20-32:13,10,0,12:20,3|21,2|22,8:5,1|9,2|10,1|11,1|13,1|14,2|16,1|17,1|21,1|29,1:264.281:366.612,131.36:0.19802,4.38695:0.000455048,0.999546,6.6337e-28	0/0:27:0.799191:26,26:26-26,26-26:6,5,0,16:26,6:4,1|5,2|8,1|11,1|13,1|15,1|16,2|17,1|18,1|20,1|21,1|22,1|25,2:200.894:326.675,113.385:0.0,0.0:2.87718e-07,0.0580028,0.942083
-chr1	5420026	.	ATGTATGTATGT	.	.	.	END=5420037;RU=atgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:182.254:366.612,131.36:0.0,0.0:0.0,6.34021e-06,0.999994	0/0:20:0.999831:3,3:3-3,3-3:16,4,0,0:3,16:NULL:101.288:326.675,113.385:0.0,0.0:0.0,9.05735e-05,0.999911
-chr1	5421453	.	AGAAAAGAAAAGAAA	.	.	.	END=5421467;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:232.041:366.612,131.36:0.0,0.0:0.0,1.245e-07,1.0	0/0:27:0.99925:3,3:3-3,3-3:14,11,0,2:3,14:2,2:171.015:326.675,113.385:0.0,0.0:1.787e-42,0.000363445,0.999637
-chr1	5421483	.	AACAAACAAACAAACA	.	.	.	END=5421498;RU=aaca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999137:4,4:4-4,4-4:14,12,0,5:4,14:2,2|3,3:205.526:366.612,131.36:0.0,0.0:2.6384e-41,0.000376896,0.999628	0/0:23:0.98592:4,4:4-4,4-4:10,10,0,3:4,10:2,3:155.459:326.675,113.385:0.0,0.0:7.92884e-30,0.00829948,0.991719
-chr1	5421960	.	TTTGTTTGTTTG	.	.	.	END=5421971;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999768:3,3:3-3,3-3:15,7,0,2:3,15:2,2:142.043:366.612,131.36:0.0,0.0:0.0,9.03633e-05,0.999911	0/0:22:0.998824:3,3:2-3,2-3:13,8,0,0:3,13:NULL:131.18:326.675,113.385:0.452422,0.452422:2.207e-42,0.000683346,0.999318
-chr1	5429464	.	GGGTGGGTGGGT	.	.	.	END=5429475;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.947173:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.027:366.612,131.36:0.19802,0.19802:4.74538e-22,0.0328576,0.967201	0/0:35:0.992779:3,3:3-3,3-3:10,25,0,0:3,10:NULL:265.199:326.675,113.385:0.0,0.0:1.95984e-27,0.00480293,0.995206
-chr1	5439295	.	AAATAAATAAAT	.	.	.	END=5439306;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,15,0,2:3,37:2,2:300.503:366.612,131.36:0.0,0.0:0.0,4.26324e-11,1.0	0/0:34:0.999972:3,3:3-3,3-3:17,14,0,3:3,17:2,3:218.014:326.675,113.385:0.0,0.0:0.0,1.9811e-05,0.99998
-chr1	5439862	.	AAAAACAAAAACAAAAAC	.	.	.	END=5439879;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:37,18,0,0:3,37:NULL:309.002:366.612,131.36:0.0,0.0:0.0,7.11533e-11,1.0	0/0:42:1.0:3,3:3-3,3-3:28,12,0,2:3,28:2,2:231.902:326.675,113.385:0.0,0.0:0.0,2.05311e-08,1.0
-chr1	5439880	.	CAAGCAAGCAAG	.	.	.	END=5439891;RU=caag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:316.843:366.612,131.36:0.0,0.0:0.0,1.11968e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:28,14,0,2:3,28:2,2:247.995:326.675,113.385:0.0,0.0:0.0,1.62076e-08,1.0
-chr1	5440024	.	AAAACAAAACAAAAC	.	.	.	END=5440038;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:30,14,0,2:3,30:2,2:270.182:366.612,131.36:0.0,0.0:0.0,1.14812e-08,1.0	0/0:36:1.0:3,3:3-3,3-3:27,7,0,2:3,27:2,2:183.432:326.675,113.385:0.0,0.0:0.0,2.03527e-08,1.0
-chr1	5448684	.	GTGGTGGTGGTG	.	.	.	END=5448695;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:20,13,0,2:4,20:3,2:202.444:366.612,131.36:0.0,0.0:0.0,3.08094e-06,1.0	0/0:27:0.999992:4,4:4-4,4-4:19,8,0,0:4,19:NULL:144.751:326.675,113.385:0.0,0.0:0.0,1.63653e-05,0.999986
-chr1	5448817	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5448840;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.99861:6,6:6-6,6-6:13,8,0,3:6,13:3,1|4,2:144.918:366.612,131.36:0.0,0.0:1.36302e-38,0.000751979,0.999249	0/0:27:0.982701:6,6:6-6,6-6:9,13,0,5:6,9:2,1|4,2|5,2:191.308:326.675,113.385:0.0,0.0:8.67818e-27,0.0079832,0.992034
-chr1	5448857	.	AAACAAAACAAAACA	.	.	.	END=5448871;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.984248:3,3:3-3,3-3:9,8,0,0:3,9:NULL:107.217:366.612,131.36:0.0,0.0:1.10938e-30,0.00908823,0.990933	0/0:21:0.937648:3,3:3-3,3-3:8,13,0,0:3,8:NULL:154.225:326.675,113.385:0.220506,0.220506:1.31029e-26,0.0483356,0.95174
-chr1	5449710	.	TTTCTTTCTTTC	.	.	.	END=5449721;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:243.822:366.612,131.36:0.0,0.0:0.0,1.68455e-07,1.0	0/0:47:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:251.345:326.675,113.385:0.0,0.0:0.0,3.88499e-10,1.0
-chr1	5450202	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5450241;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.998109:25,25:25-27,25-27:14,20,0,18:25,14:5,3|6,3|7,2|9,1|11,1|14,1|15,1|17,2|18,2|22,1|25,1:392.37:366.612,131.36:0.480581,0.480581:0.0,0.0,1.0	0/0:73:0.91676:20,20:19-20,19-20:20,22,0,30:18,2|19,4|20,14:6,1|7,2|8,2|9,4|10,2|11,3|13,4|14,1|15,2|17,2|18,3|19,4:532.856:326.675,113.385:0.391308,0.391308:2.08895e-13,0.0831682,0.916927
-chr1	5457139	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5457182;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.986189:19,20:16-21,19-21:11,21,0,10:19,6|20,5:8,1|14,2|15,2|16,1|17,1|18,1|19,2:333.91:366.612,131.36:0.831565,0.667418:0.999903,9.76201e-05,1.34211e-13	0/3:41:0.947557:22,23:22-22,21-23:22,8,0,11:20,2|21,5|22,15:5,1|6,1|10,1|14,1|16,1|17,1|18,1|19,1|21,2|23,1:292.012:326.675,113.385:0.0990099,0.738271:2.52359e-16,0.000188425,0.999812
-chr1	5457182	.	GAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=5457205;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:0.877325:12,12:7-13,7-13:24,22,0,2:8,2|12,19|13,3:8,1|12,1:339.915:366.612,131.36:2.23609,2.23609:8.74e-43,0.00860933,0.991412	0/0:39:0.980078:12,12:10-12,10-12:21,12,0,6:10,2|11,2|12,17:8,1|9,1|10,2|11,2:261.833:326.675,113.385:0.640587,0.640587:1.28858e-27,0.0199597,0.980082
-chr1	5458563	.	GTTGGTTGGTTG	.	.	.	END=5458574;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999991:3,3:3-3,3-3:18,14,0,2:3,18:2,2:209.978:366.612,131.36:0.0,0.0:0.0,1.73614e-05,0.999986	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:191.171:326.675,113.385:0.0,0.0:0.0,2.52026e-07,1.0
-chr1	5467842	.	TTGTTTGTTTGT	.	.	.	END=5467853;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:179.754:366.612,131.36:0.0,0.0:0.0,9.2688e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.865:326.675,113.385:0.0,0.0:0.0,8.0646e-07,1.0
-chr1	5469905	.	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	.	.	END=5469964;RU=ttct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:27:0.779798:15,16:15-15,15-17:9,12,0,5:15,7|16,2:8,1|10,2|13,1|14,1:199.013:366.612,131.36:0.19802,0.57834:9.18276e-12,0.00672041,0.993294	0/0:61:0.998617:15,15:13-16,13-16:13,23,0,23:15,13:2,1|4,2|5,1|7,1|8,2|9,2|10,2|11,6|12,2|13,1|14,3:441.154:326.675,113.385:0.554102,0.554102:2.05185e-19,0.000934836,0.999067
-chr1	5470375	.	ATTTATTTATTTATTTATTT	.	.	.	END=5470394;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999856:5,5:5-5,5-5:16,12,0,2:5,16:4,2:185.188:366.612,131.36:0.0,0.0:0.0,6.52832e-05,0.999934	0/0:35:1.0:5,5:4-5,4-5:19,10,0,5:5,19:4,5:204.259:326.675,113.385:0.270063,0.270063:0.0,5.63075e-06,0.999995
-chr1	5487012	.	AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	AGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA,AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	.	.	END=5487095;RU=aga;PERIOD=3;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.0641902:1,25:1-27,19-27:0,16,0,6:NULL:7,1|15,1|19,1|21,1|24,1|25,1:194.376:366.612,131.36:10.4167,2.80123:0.814845,0.18449,0.000731844	3/3:29:0.0350084:26,26:26-28,26-28:0,13,0,14:NULL:5,1|8,1|10,1|15,2|16,1|19,1|21,1|22,3|24,1|26,2:224.711:326.675,113.385:0.788731,0.788731:0.213982,0.516544,0.269537
-chr1	5487104	.	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG	.	.	END=5487154;RU=gag;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.221203:19,19:16-19,16-19:2,9,0,5:19,2:5,1|7,1|8,1|9,1|10,1:132.591:366.612,131.36:1.14809,1.14809:3.42417e-06,0.223225,0.776813	0/0:17:0.227302:17,17:10-17,10-17:3,6,0,7:17,3:5,2|7,1|8,1|10,2|11,1:122.998:326.675,113.385:3.21628,3.21628:1.88104e-06,0.621967,0.378086
-chr1	5491577	.	TTTCTTTCTTTCTTTC	.	.	.	END=5491592;RU=tttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999683:4,4:4-4,4-4:15,6,0,0:4,15:NULL:111.491:366.612,131.36:0.0,0.0:0.0,0.00020738,0.999796	0/0:32:0.999873:4,4:4-4,4-4:16,14,0,2:4,16:2,1|3,1:203.31:326.675,113.385:0.0,0.0:0.0,7.7951e-05,0.999925
-chr1	5495145	.	TATTATTATTAT	.	.	.	END=5495156;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999919:4,4:4-4,4-4:17,17,0,2:4,17:3,2:230.211:366.612,131.36:0.0,0.0:0.0,4.36298e-05,0.999957	0/0:34:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:190.37:326.675,113.385:0.0,0.0:0.0,9.03848e-07,1.0
-chr1	5499413	.	AAACAAACAAAC	.	.	.	END=5499424;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999984:3,3:3-3,3-3:18,9,0,0:3,18:NULL:151.645:366.612,131.36:0.0,0.0:0.0,1.95113e-05,0.99998	0/0:36:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:183.415:326.675,113.385:0.0,0.0:0.0,3.58705e-08,1.0
-chr1	5499767	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	AT	.	.	END=5499818;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00139684:1,1:1-3,1-3:0,4,0,0:NULL:NULL:36.3001:366.612,131.36:0.748295,0.748295:0.364437,0.535353,0.100301	.
-chr1	5504534	.	TATTTATTTATT	.	.	.	END=5504545;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:29,25,0,2:3,29:2,2:358.683:366.612,131.36:0.0,0.0:0.0,1.36141e-08,1.0	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:216.165:326.675,113.385:0.0,0.0:0.0,3.61663e-07,1.0
-chr1	5513530	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5513567;RU=tc;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.31293:23,23:19-24,19-24:3,13,0,9:23,3:4,1|6,1|7,1|9,1|10,1|18,1|20,1|22,1|23,1:206.714:366.612,131.36:2.04637,2.04637:2.11561e-29,0.066714,0.93338	0/0:34:0.987245:19,19:11-19,11-19:11,10,0,11:19,11:5,1|6,1|8,1|9,1|13,2|14,2|15,3:226.557:326.675,113.385:3.57627,3.57627:1.20532e-13,0.00759209,0.992424
-chr1	5516671	.	TCTCTCTCTCTCTC	.	.	.	END=5516684;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:33,10,0,3:7,33:6,3:244.379:366.612,131.36:0.0,0.0:0.0,5.01572e-10,1.0	0/0:24:0.999066:7,7:7-8,7-8:14,9,0,0:7,14:NULL:143.434:326.675,113.385:0.390807,0.390807:7.46736e-28,0.000425895,0.999576
-chr1	5518233	.	ACACACACACAC	.	.	.	END=5518244;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:6,6:6-6,6-6:20,8,0,0:6,20:NULL:155.727:366.612,131.36:0.0,0.0:4.54e-43,8.39984e-06,0.999994	0/0:40:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:203.485:326.675,113.385:0.139319,0.139319:0.0,1.84411e-08,1.0
-chr1	5522366	.	TTTATTTATTTA	.	.	.	END=5522377;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.998395:3,3:3-3,3-3:13,24,0,0:3,13:NULL:264.156:366.612,131.36:0.0,0.0:5.0445e-41,0.00110037,0.998906	0/0:35:0.99986:3,3:3-3,3-3:16,19,0,0:3,16:NULL:231.943:326.675,113.385:0.0,0.0:0.0,0.000107282,0.999895
-chr1	5526299	.	TTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTATTTATTTATTTAT	.	.	END=5526322;RU=ttat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.999594:6,9:6-9,9-9:8,13,0,2:6,2|9,6:4,1|5,1:173.311:366.612,131.36:1.17184,0.0:1.26762e-24,3.43917e-05,0.99997	0/0:20:0.999737:6,6:6-6,6-6:15,3,0,2:6,15:5,2:102.456:326.675,113.385:0.0,0.0:2.452e-42,0.000103453,0.999896
-chr1	5531371	.	AAATAAATAAATAAAT	.	.	.	END=5531386;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:22,11,0,5:4,22:2,5:220.017:366.612,131.36:0.0,0.0:0.0,1.25235e-06,1.0	0/0:29:0.999984:4,4:4-4,4-4:18,9,0,2:4,18:2,1|3,1:165.399:326.675,113.385:0.0,0.0:0.0,2.12228e-05,0.999979
-chr1	5532982	.	TGTGTGTGTGTGTGTG	TGTGTGTG	.	.	END=5532997;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.0437343:4,4:4-8,4-8:0,23,0,0:NULL:NULL:212.091:366.612,131.36:1.29055,1.29055:0.450508,0.449184,0.100457	0/0:42:1.0:8,8:8-8,8-8:27,12,0,3:8,27:6,1|7,2:250.369:326.675,113.385:0.0,0.0:1.72e-43,5.25782e-08,1.0
-chr1	5534046	.	ATGTATGTATGTATGT	.	.	.	END=5534061;RU=atgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:29,14,0,6:4,29:3,6:287.447:366.612,131.36:0.0990099,0.0990099:0.0,5.60014e-09,1.0	0/0:46:1.0:4,4:4-4,4-4:27,16,0,3:4,27:3,3:272.756:326.675,113.385:0.0,0.0:0.0,1.82221e-08,1.0
-chr1	5534075	.	TATGTATGTATGTATG	.	.	.	END=5534090;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:35,13,0,3:4,35:2,1|3,2:280.629:366.612,131.36:0.0,0.0:0.0,1.11186e-10,1.0	0/0:47:1.0:4,4:4-4,4-4:30,15,0,2:4,30:3,2:273.347:326.675,113.385:0.0,0.0:0.0,3.21582e-09,1.0
-chr1	5534127	.	TGTGTGTGTGTG	.	.	.	END=5534138;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:6,6:6-6,6-6:26,19,0,0:6,26:NULL:275.467:366.612,131.36:0.139319,0.139319:0.0,3.5554e-07,1.0	0/0:55:1.0:6,6:6-6,6-6:31,20,0,4:6,31:4,1|5,3:344.947:326.675,113.385:0.0,0.0:0.0,1.02131e-09,1.0
-chr1	5538600	.	TTTTGTTTTGTTTTG	.	.	.	END=5538614;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.793571:3,3:3-3,3-3:5,25,0,0:3,5:NULL:251.759:366.612,131.36:0.0990099,0.0990099:2.33087e-17,0.156038,0.844041	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:197.842:326.675,113.385:0.0,0.0:0.0,3.18443e-07,1.0
-chr1	5539245	.	AGAGAGAGAGAG	.	.	.	END=5539256;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:5-6,5-6:24,10,0,2:6,24:4,1|5,1:203.302:366.612,131.36:0.169767,0.169767:0.0,3.64039e-07,1.0	0/0:36:1.0:6,6:6-7,6-7:20,15,0,0:6,20:NULL:216.86:326.675,113.385:0.236383,0.236383:0.0,7.99914e-06,0.999994
-chr1	5541995	.	TCTATCTATCTA	.	.	.	END=5542006;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:19,14,0,0:3,19:NULL:198.958:366.612,131.36:0.0,0.0:0.0,7.97423e-06,0.999994	0/0:32:1.0:3,3:3-3,3-3:25,7,0,0:3,25:NULL:162.531:326.675,113.385:0.0,0.0:0.0,1.63627e-07,1.0
-chr1	5543920	.	AAACAAACAAACAAACAAAC	.	.	.	END=5543939;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:5,5:5-5,5-5:27,14,0,5:5,27:3,2|4,3:270.026:366.612,131.36:0.0,0.0:0.0,1.74728e-08,1.0	0/0:43:1.0:5,5:5-5,5-5:32,8,0,3:5,32:4,3:218.073:326.675,113.385:0.0,0.0:0.0,7.62889e-10,1.0
-chr1	5548928	.	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	GTGTGCGTGTGCGTGTGCGTGTGCGTGTGC	.	.	END=5548963;RU=gtgtgc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.996997:5,5:4-6,4-6:12,16,0,2:5,12:3,2:215.759:366.612,131.36:0.563226,0.563226:0.999097,0.000907121,4.83865e-25	0/0:40:1.00001:6,6:3-6,3-6:21,12,0,6:6,21:2,1|4,1|5,4:243.175:326.675,113.385:0.650759,0.650759:0.0,1.87243e-06,1.0
-chr1	5568606	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATATATA	.	.	END=5568637;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.191459:12,12:12-13,12-13:2,0,0,0:12,2:NULL:8.72991:366.612,131.36:0.472558,0.472558:0.898586,0.101517,4.30333e-07	0/0:6:0.241205:16,16:11-16,11-16:3,0,0,0:16,3:NULL:13.3392:326.675,113.385:1.94044,1.94044:0.0041078,0.534572,0.461435
-chr1	5568681	.	TCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTC	.	.	END=5568700;RU=tc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.167585:9,9:6-10,6-10:2,1,0,0:9,2:NULL:16.2695:366.612,131.36:1.41933,1.41933:0.676238,0.323648,0.000128575	0/0:4:0.389106:10,10:10-10,10-10:3,1,0,0:10,3:NULL:20.8043:326.675,113.385:0.0,0.0:0.000122906,0.325088,0.674802
-chr1	5568724	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAG	.	.	END=5568751;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.981721:10,11:6-10,6-11:7,1,0,0:10,4|11,3:NULL:42.692:366.612,131.36:1.60988,1.61328:0.999643,0.000360942,2.85432e-12	0/0:8:0.667283:14,14:14-14,14-14:5,3,0,0:14,5:NULL:46.9753:326.675,113.385:0.0,0.0:4.33107e-07,0.162209,0.837866
-chr1	5571339	.	AACAACAACAAC	.	.	.	END=5571350;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.993811:4,4:4-4,4-4:11,9,0,0:4,11:NULL:128.626:366.612,131.36:0.0,0.0:1.40082e-30,0.0044127,0.995598	0/0:28:0.999866:4,4:2-4,2-4:16,9,0,2:4,16:3,2:161.802:326.675,113.385:0.885129,0.885129:3.8e-44,6.70363e-05,0.999934
-chr1	5573523	.	GAAAGAAAGAAAGAAA	.	.	.	END=5573538;RU=gaaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99979:4,4:4-4,4-4:15,12,0,2:4,15:3,2:184.59:366.612,131.36:0.0,0.0:1.7e-44,0.000114813,0.999887	0/0:42:1.0:4,4:4-5,4-5:23,14,0,4:4,23:3,4:249.905:326.675,113.385:0.311527,0.311527:0.0,4.699e-07,1.0
-chr1	5573587	.	AAAGAAAGAAAG	.	.	.	END=5573598;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999662:3,3:3-3,3-3:14,13,0,2:3,14:2,2:192.077:366.612,131.36:0.0,0.0:0.0,0.000165596,0.999835	0/0:41:1.0:3,3:3-3,3-3:24,15,0,2:3,24:3,2:244.91:326.675,113.385:0.0,0.0:0.0,1.01008e-07,1.0
-chr1	5579717	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5579762;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:26:0.03869:26,26:21-26,21-26:0,16,0,8:NULL:7,1|9,1|16,2|18,1|20,1|23,1|26,1:220.015:366.612,131.36:2.18267,2.18267:3.56267e-15,0.437331,0.562764	0/1:30:0.28606:23,25:21-23,21-28:4,10,0,14:23,4:5,1|6,1|8,1|9,1|12,2|13,1|14,1|15,1|17,1|21,1|22,2|25,1:229.174:326.675,113.385:0.446534,1.60396:2.90831e-11,0.000185028,0.999818
-chr1	5581808	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5581829;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999005:12,12:12-12,12-12:14,15,0,6:12,14:5,1|6,1|8,1|9,2|11,1:246.406:366.612,131.36:0.0,0.0:7.50395e-39,0.00022835,0.999773	0/0:16:0.918632:11,11:11-12,11-12:7,5,0,3:11,7:6,1|10,1|11,1:96.9763:326.675,113.385:0.40582,0.40582:1.2915e-18,0.016726,0.983311
-chr1	5585680	.	CTCTCTCTCTCT	CTCTCTCTCTCTCT	.	.	END=5585691;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.716874:6,7:6-6,6-7:13,10,0,0:6,11|7,2:NULL:153.498:366.612,131.36:0.0,0.491073:1.32097e-24,0.000262666,0.999742	0/0:19:0.985692:6,6:6-6,6-6:10,9,0,0:6,10:NULL:122.269:326.675,113.385:0.0,0.0:2.78805e-20,0.00890045,0.99112
-chr1	5589327	.	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	GGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGT	.	.	END=5589356;RU=ggt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.975048:12,12:12-12,12-12:9,13,0,2:12,9:7,2:169.879:366.612,131.36:0.0,0.0:3.58951e-33,0.00724252,0.992775	0/0:24:0.964384:10,10:9-10,9-10:8,11,0,4:10,8:4,1|5,1|9,2:162.775:326.675,113.385:0.465241,0.465241:2.92195e-21,0.0195605,0.980478
-chr1	5589376	.	TGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5589399;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.122528:23,23:19-23,19-23:2,12,0,0:23,2:NULL:116.017:366.612,131.36:1.34493,1.34493:0.0,0.0,1.0	0/0:28:0.992728:12,12:9-12,9-12:11,11,0,4:12,11:7,1|10,1|11,2:180.542:326.675,113.385:1.30955,1.30955:2.36841e-16,0.00337366,0.996634
-chr1	5589780	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5589835;RU=tg;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.684515:22,22:22-22,22-22:5,9,0,11:22,5:9,2|10,2|12,1|15,3|17,2|20,1:194.5:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.434615:28,28:25-29,25-29:4,10,0,15:28,4:4,1|8,2|10,2|11,1|13,2|14,2|18,2|19,1|21,1|26,1:229.133:326.675,113.385:1.42595,1.42595:5.64146e-05,0.301819,0.698134
-chr1	5592598	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5592667;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0124984:36,36:2-36,2-36:0,10,0,6:NULL:8,1|17,1|22,1|23,1|33,1|34,1:142.041:366.612,131.36:12.4172,12.4172:0.208392,0.695051,0.0966789	0/0:36:0.217245:35,35:30-35,30-35:2,17,0,16:35,2:5,1|6,2|10,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|26,1|28,1|29,1|34,2:297.947:326.675,113.385:1.11605,1.11605:0.00272634,0.394995,0.602354
-chr1	5593742	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5593777;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.887398:18,19:16-22,16-22:6,10,0,5:18,4|19,2:6,1|8,1|9,2|11,1:165.187:366.612,131.36:1.81321,1.54443:3.33702e-07,0.0161178,0.983918	0/0:40:0.971211:18,18:17-18,17-18:16,12,0,11:17,3|18,13:4,1|5,1|7,1|9,1|11,1|12,1|13,2|14,1|15,1|17,1:276.968:326.675,113.385:0.323567,0.323567:7.60834e-14,0.0281487,0.971905
-chr1	5594362	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594409;RU=acagatatcagc;PERIOD=12;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.99997:4,4:4-4,4-4:19,9,0,7:4,19:2,4|3,3:214.928:366.612,131.36:0.0,0.0:2.03387e-23,3.57251e-05,0.999964	0/0:29:0.993895:4,4:4-4,4-4:11,12,0,6:4,11:3,6:194.69:326.675,113.385:0.0,0.0:1.35695e-13,0.00487052,0.995139
-chr1	5594483	.	ACAGATATCAGCACAGATATCAGCACAGATATCAGC	.	.	.	END=5594518;RU=acagatatcagc;PERIOD=12;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.992171:3,3:3-3,3-3:10,9,0,6:3,10:2,5|3,1:162.564:366.612,131.36:0.0,0.0:1.07008e-20,0.00423133,0.995779	0/0:27:0.99893:3,3:3-3,3-3:13,11,0,3:3,13:2,2|3,1:171.44:326.675,113.385:0.0,0.0:2.17272e-24,0.000780489,0.999225
-chr1	5601522	.	CTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=5601537;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.381909:19,19:16-19,16-19:3,10,0,3:19,3:6,1|11,1|18,1:127.14:366.612,131.36:0.550196,0.550196:0.0,0.0,1.0	0/0:10:0.859694:8,8:6-8,6-8:7,2,0,0:8,7:NULL:47.0547:326.675,113.385:0.81164,0.81164:3.07523e-11,0.0813469,0.918751
-chr1	5601538	.	CACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACA	.	.	END=5601571;RU=ca;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:16:0.0438883:20,20:20-23,20-23:0,8,0,7:NULL:4,1|5,1|6,2|9,1|13,2:127.313:366.612,131.36:1.37748,1.37748:0.0,0.0,1.0	1/1:12:0.226687:15,15:15-17,15-17:2,4,0,4:15,2:4,1|8,1|10,1|14,1:74.861:326.675,113.385:0.733609,0.733609:0.596184,0.403375,0.000510556
-chr1	5605789	.	TATATATATATA	.	.	.	END=5605800;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.999173:6,6:6-6,6-6:14,6,0,0:6,14:NULL:109.551:366.612,131.36:0.0,0.0:1.50464e-25,0.000455149,0.999546	0/0:11:0.680517:6,6:6-7,6-7:5,5,0,0:6,5:NULL:67.2546:326.675,113.385:0.491073,0.491073:1.41842e-09,0.179353,0.820711
-chr1	5607518	.	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	CCCTCCCCTCCCCTCCCCTCCCCTCCCCTC,CCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTC	.	.	END=5607567;RU=ccctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:6:0.0428456:7,7:2-8,2-8:0,3,0,3:NULL:5,2|6,1:47.4534:366.612,131.36:1.42106,1.42106:1.0,0.0,0.0	1/1:4:0.0418975:6,6:6-9,6-9:0,3,0,0:NULL:NULL:28.9:326.675,113.385:1.35727,1.35727:0.366524,0.478544,0.154989
-chr1	5609483	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=5609534;RU=tctt;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:27:0.457214:16,18:13-16,13-18:8,9,0,9:13,3|16,5:2,1|3,1|4,1|7,2|8,1|13,1|16,1|18,1:204.837:366.612,131.36:1.26965,2.41742:5.45352e-38,3.81258e-08,1.0	1/0:36:0.820827:12,13:8-13,13-13:9,13,0,13:12,2|13,7:4,1|5,1|6,3|7,3|9,1|10,3|12,1:260.367:326.675,113.385:1.75429,0.0:1.0024e-14,0.823073,0.176996
-chr1	5609614	.	TCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5609639;RU=tc;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.974538:19,24:16-24,19-24:4,6,0,3:19,2|24,2:9,1|12,1|16,1:103.857:366.612,131.36:1.59046,1.91609:0.0,0.0,1.0	0/0:20:0.542862:13,13:11-13,11-13:4,12,0,4:13,4:7,2|9,1|11,1:160.209:326.675,113.385:0.497617,0.497617:1.63911e-05,0.276384,0.723601
-chr1	5612315	.	CTGGCTGGCTGG	.	.	.	END=5612326;RU=ctgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998233:3,3:3-3,3-3:13,15,0,0:3,13:NULL:191.934:366.612,131.36:0.0,0.0:2.74e-42,0.00100296,0.998999	0/0:22:0.940243:3,3:3-3,3-3:7,15,0,0:3,7:NULL:175.706:326.675,113.385:0.0,0.0:7.17578e-23,0.0445383,0.955537
-chr1	5612776	.	TTTATTTATTTA	.	.	.	END=5612787;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999995:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.896:366.612,131.36:0.0,0.0:0.0,1.15696e-05,0.999987	0/0:18:0.999421:3,3:3-3,3-3:14,4,0,0:3,14:NULL:91.4822:326.675,113.385:0.0,0.0:5.724e-42,0.000277712,0.999727
-chr1	5614359	.	TCCCTCCCTCCCTCCC	.	.	.	END=5614374;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998846:4,4:4-4,4-4:13,11,0,2:4,13:2,1|3,1:165.446:366.612,131.36:0.0,0.0:3.5e-44,0.00055509,0.999447	0/0:28:0.999522:4,4:4-4,4-4:15,13,0,0:4,15:NULL:179.777:326.675,113.385:0.0,0.0:0.0,0.000362995,0.999637
-chr1	5616757	.	AAGCAAGCAAGC	.	.	.	END=5616768;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999861:3,3:3-3,3-3:16,17,0,0:3,16:NULL:219.518:366.612,131.36:0.0,0.0:0.0,8.99908e-05,0.999911	0/0:26:0.999902:3,3:3-3,3-3:16,8,0,2:3,16:2,2:151.309:326.675,113.385:0.0,0.0:0.0,4.69939e-05,0.999956
-chr1	5617140	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5617189;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:30:0.290156:25,43:24-26,23-43:5,6,0,16:25,5:5,1|6,1|8,1|12,2|14,1|20,2|21,2|22,3|23,1|24,1|43,1:206.925:366.612,131.36:0.344122,8.89312:2.08458e-12,2.3267e-06,1.0	0/0:26:0.343833:25,25:24-26,24-26:11,6,0,9:24,3|25,6|26,2:7,1|9,1|11,1|15,1|17,1|18,1|19,1|20,1|23,1:192.044:326.675,113.385:0.713833,0.713833:5.2481e-07,0.146591,0.853494
-chr1	5617615	.	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	TTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTC	.	.	END=5617699;RU=ttctc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.287728:17,17:14-19,14-19:2,2,0,10:17,2:6,1|7,2|11,1|12,4|16,2:101.018:366.612,131.36:0.856307,0.856307:4.75116e-05,0.26636,0.733597	1/1:9:0.0362275:20,20:16-20,16-20:0,1,0,7:NULL:4,1|6,1|10,1|13,1|15,1|16,2:57.8107:326.675,113.385:1.3165,1.3165:0.059034,0.378311,0.562803
-chr1	5618977	.	CAGCAGCAGCAG	.	.	.	END=5618988;RU=cag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,18,0,0:4,23:NULL:253.62:366.612,131.36:0.0,0.0:0.0,8.95862e-07,1.0	0/0:31:0.999995:4,4:4-4,4-4:20,11,0,0:4,20:NULL:187.212:326.675,113.385:0.0,0.0:0.0,1.45056e-05,0.999987
-chr1	5620595	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5620640;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.138323:25,25:21-25,21-25:2,14,0,9:25,2:5,1|6,1|7,1|12,1|13,2|15,1|20,1|23,1:216.568:366.612,131.36:0.923821,0.923821:3.11768e-12,0.378233,0.621819	0/0:23:0.370281:23,23:22-24,22-24:6,4,0,12:22,2|23,4:6,1|7,2|11,1|12,1|18,1|19,1|20,1|21,1|22,3:165.941:326.675,113.385:0.722976,0.722976:0.000106707,0.555466,0.444532
-chr1	5623551	.	TTATTTTATTTTATT	.	.	.	END=5623565;RU=ttatt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.671791:3,3:1-3,1-3:5,10,0,0:3,5:NULL:113.692:366.612,131.36:0.390054,0.390054:2.78286e-16,0.187197,0.812863	0/0:21:0.999475:3,3:3-3,3-3:14,5,0,2:3,14:2,2:115.762:326.675,113.385:0.0,0.0:1e-44,0.000232575,0.999772
-chr1	5625250	.	CACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=5625297;RU=ca;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.291461:22,33:22-22,21-35:11,19,0,15:21,2|22,9:8,1|9,3|11,2|16,3|17,1|18,2|19,1|21,1|32,1:360.412:366.612,131.36:0.0,5.49805:9.90578e-05,0.999903,3.27363e-12	0/0:53:0.576253:24,24:23-24,23-24:22,19,0,11:23,7|24,15:7,1|8,1|10,1|12,1|16,1|20,1|21,2|22,2|23,1:376.926:326.675,113.385:0.452422,0.452422:2.10056e-11,0.4238,0.576288
-chr1	5626755	.	TATATATATATATA	TA	.	.	END=5626768;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.00338735:1,1:1-4,1-4:0,5,0,0:NULL:NULL:46.7652:366.612,131.36:0.896026,0.896026:0.0533552,0.4034,0.543409	0/0:11:0.951073:7,7:7-7,7-7:8,3,0,0:7,8:NULL:57.6703:326.675,113.385:0.0,0.0:2.05221e-11,0.0266218,0.973432
-chr1	5627434	.	ACCCACCCACCC	.	.	.	END=5627445;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.439336:3,3:3-3,3-3:3,1,0,0:3,3:NULL:21.193:366.612,131.36:0.29703,0.29703:7.97056e-09,0.185254,0.814805	0/0:13:0.981742:3,3:3-3,3-3:9,4,0,0:3,9:NULL:71.9961:326.675,113.385:0.0,0.0:7.77127e-24,0.00726744,0.992752
-chr1	5628800	.	GTGTGTGTGTGT	.	.	.	END=5628811;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999987:6,6:6-6,6-6:19,26,0,0:6,19:NULL:306.178:366.612,131.36:0.0,0.0:2.44924e-39,2.24444e-05,0.999979	0/0:32:0.999816:6,6:6-6,6-6:16,16,0,0:6,16:NULL:198.309:326.675,113.385:0.0,0.0:1.65706e-33,0.000107345,0.999895
-chr1	5634536	.	ACATACATACAT	.	.	.	END=5634547;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999781:3,3:3-3,3-3:15,18,0,2:3,15:2,2:241.613:366.612,131.36:0.0,0.0:5.3e-44,0.000139803,0.999864	0/0:24:0.999689:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.811:326.675,113.385:0.0,0.0:3.2e-44,0.000172858,0.999827
-chr1	5645300	.	CCACCCACCCACCCAC	.	.	.	END=5645315;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,14,0,3:4,26:2,1|3,2:257.308:366.612,131.36:0.0,0.0:0.0,5.39436e-08,1.0	0/0:20:0.987727:4,4:4-4,4-4:10,10,0,0:4,10:NULL:132.37:326.675,113.385:0.0,0.0:1.37064e-33,0.00887219,0.991149
-chr1	5648208	.	TTTCTTTCTTTC	.	.	.	END=5648219;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:236.188:366.612,131.36:0.0,0.0:0.0,3.50995e-06,1.0	0/0:19:0.998321:3,3:3-3,3-3:13,6,0,0:3,13:NULL:107.261:326.675,113.385:0.0,0.0:4.6e-44,0.00108233,0.998922
-chr1	5658059	.	AACCAACCAACCAACCAACCAACCAACCAACC	.	.	.	END=5658090;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.997758:8,8:8-8,8-8:12,19,0,6:8,12:5,3|6,1|7,2:270.432:366.612,131.36:0.0,0.0:4.34303e-37,0.00122251,0.998784	0/0:22:0.995541:8,8:8-8,8-8:11,4,0,7:8,11:3,2|6,2|7,3:134.487:326.675,113.385:0.0,0.0:2.63941e-34,0.0014174,0.998587
-chr1	5659996	.	ACACACACACACAC	.	.	.	END=5660009;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999491:7,7:7-7,7-7:15,22,0,2:7,15:5,2:281.623:366.612,131.36:0.0,0.0:5.3889e-37,0.000244781,0.999758	0/0:32:1.00001:7,7:7-7,7-7:23,7,0,2:7,23:5,1|6,1:172.037:326.675,113.385:0.0,0.0:0.0,5.81845e-07,1.0
-chr1	5667369	.	TTGTTTTGTTTTGTT	.	.	.	END=5667383;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999211:3,3:3-3,3-3:14,19,0,0:3,14:NULL:237.415:366.612,131.36:0.0,0.0:1e-45,0.00064475,0.999356	0/0:19:0.991355:3,3:3-3,3-3:10,9,0,0:3,10:NULL:123.116:326.675,113.385:0.0,0.0:3.09465e-33,0.00534692,0.994664
-chr1	5668188	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=5668233;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.973632:17,17:16-17,16-17:16,18,0,8:16,3|17,13:5,2|7,1|8,1|13,1|15,1|16,2:309.774:366.612,131.36:0.345543,0.345543:1.0,0.0,0.0	0/0:29:0.878676:23,23:22-23,22-23:7,12,0,9:23,7:8,1|12,2|15,2|16,2|17,1|20,1:213.066:326.675,113.385:0.298675,0.298675:7.90049e-11,0.0683182,0.931775
-chr1	5668714	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5668747;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:49:0.306761:28,31:28-30,29-32:5,13,0,30:28,3|29,2:4,1|5,1|6,1|7,1|8,2|9,1|10,2|12,1|13,1|14,1|15,1|16,1|17,1|18,5|22,2|23,2|24,1|27,1|28,1|30,1|31,2:394.435:366.612,131.36:0.553571,0.556925:0.0,0.0,1.0	0/0:47:0.937667:17,17:17-18,17-18:21,12,0,12:17,18|18,3:6,1|7,1|8,2|10,2|12,1|13,1|15,3|16,1:308.257:326.675,113.385:0.334882,0.334882:4.03709e-26,5.38759e-06,0.999995
-chr1	5683487	.	CAAACAAACAAACAAA	.	.	.	END=5683502;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:221.239:366.612,131.36:0.0,0.0:0.0,1.81181e-06,1.0	0/0:32:0.999211:4,4:3-4,3-4:13,15,0,3:4,13:3,3:210.706:326.675,113.385:0.40582,0.40582:2.35e-43,0.000417593,0.999584
-chr1	5686946	.	ACTCCACTCCACTCCACTCCACTCC	.	.	.	END=5686970;RU=actcc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:5,5:5-5,5-5:20,16,0,3:5,20:3,3:251.76:366.612,131.36:0.0,0.0:0.0,1.09203e-05,0.999993	0/0:36:1.00001:5,5:5-5,5-5:21,11,0,4:5,21:3,2|4,2:214.731:326.675,113.385:0.0,0.0:0.0,1.48824e-06,1.0
-chr1	5691957	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5691994;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0317843:25,25:25-29,25-29:0,7,0,5:NULL:4,1|18,1|20,1|22,2:107.25:366.612,131.36:1.14347,1.14347:0.0,0.0,1.0	1/0:25:0.774457:18,19:16-19,19-19:6,7,0,11:18,2|19,4:6,2|7,1|8,1|9,2|10,1|13,1|17,1|18,2:184.123:326.675,113.385:1.0388,0.139319:1.04829e-05,0.781348,0.218685
-chr1	5702366	.	GGGTGGGTGGGT	.	.	.	END=5702377;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.928342:3,3:3-3,3-3:7,18,0,0:3,7:NULL:186.16:366.612,131.36:0.0,0.0:1.29376e-20,0.0464803,0.953593	0/0:39:0.952356:3,3:3-3,3-3:7,30,0,2:3,7:2,2:314.196:326.675,113.385:0.0,0.0:6.10428e-21,0.0250173,0.975031
-chr1	5703039	.	TTTCTTTCTTTC	.	.	.	END=5703050;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:177.97:366.612,131.36:0.0,0.0:0.0,6.52669e-08,1.0	0/0:23:0.999954:3,3:3-3,3-3:17,4,0,2:3,17:2,2:117.288:326.675,113.385:0.0,0.0:0.0,1.64207e-05,0.999986
-chr1	5703348	.	TCTCTCTCTCTC	.	.	.	END=5703359;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999335:6,6:6-7,6-7:14,9,0,0:6,14:NULL:139.208:366.612,131.36:0.323567,0.323567:5.59831e-29,0.000328401,0.999674	0/0:34:0.999944:6,6:6-6,6-6:17,15,0,2:6,17:5,1|6,1:213.761:326.675,113.385:0.0,0.0:4.966e-42,1.96654e-05,0.99998
-chr1	5705129	.	TTTATTTATTTA	.	.	.	END=5705140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999745:3,3:3-3,3-3:14,13,0,4:3,14:2,4:207.898:366.612,131.36:0.0,0.0:0.0,0.000127164,0.999873	0/0:29:0.999993:3,3:3-3,3-3:18,9,0,2:3,18:2,2:172.875:326.675,113.385:0.0,0.0:0.0,1.42805e-05,0.999987
-chr1	5705229	.	CCCACCCACCCA	.	.	.	END=5705240;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:230.431:366.612,131.36:0.0,0.0:0.0,2.13014e-06,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:172.539:326.675,113.385:0.0,0.0:0.0,2.42264e-06,1.0
-chr1	5706741	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=5706764;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.999701:7,7:6-7,6-7:15,10,0,0:7,15:NULL:155.182:366.612,131.36:0.311527,0.311527:0.0,0.000164888,0.999835	0/0:29:0.99992:6,6:5-6,5-6:17,8,0,3:6,17:3,2|5,1:162.246:326.675,113.385:0.236383,0.236383:0.0,4.85328e-05,0.999955
-chr1	5708798	.	TTTATTTATTTA	.	.	.	END=5708809;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:28,18,0,0:3,28:NULL:273.838:366.612,131.36:0.0,0.0:0.0,2.28799e-08,1.0	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.191:326.675,113.385:0.0,0.0:0.0,5.58044e-06,0.999995
-chr1	5709925	.	TTCTTTCTTTCT	TTCTTTCT	.	.	END=5709936;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:1.0:2,2:2-2,2-2:19,16,0,0:2,19:NULL:225.294:366.612,131.36:0.0,0.0:0.999993,1.1175e-05,0.0	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:224.239:326.675,113.385:0.0,0.0:0.0,9.42141e-08,1.0
-chr1	5710226	.	TTGTTTTGTTTTGTTTTGTT	.	.	.	END=5710245;RU=ttgtt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:2-4,2-4:32,19,0,2:4,32:2,1|3,1:318.661:366.612,131.36:0.507951,0.507951:0.0,1.20364e-09,1.0	0/0:47:1.0:4,4:4-4,4-4:23,19,0,5:4,23:2,1|3,4:301.264:326.675,113.385:0.0,0.0:0.0,4.63585e-07,1.0
-chr1	5712340	.	AAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAAC	.	.	END=5712369;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.780734:2,2:2-2,2-2:5,14,0,0:2,5:NULL:149.149:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/0:21:0.997542:6,6:6-6,6-6:12,6,0,3:6,12:2,1|3,1|5,1:124.805:326.675,113.385:0.0,0.0:2.80473e-30,0.00135867,0.998648
-chr1	5718275	.	TTTATTTATTTA	.	.	.	END=5718286;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:246.484:366.612,131.36:0.0,0.0:0.0,3.01196e-06,1.0	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.25:326.675,113.385:0.0,0.0:0.0,2.59941e-06,1.0
-chr1	5722194	.	TATATATATATA	TATATATATATATA	.	.	END=5722205;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.999787:7,7:7-7,7-7:16,17,0,0:7,16:NULL:216.966:366.612,131.36:0.0,0.0:4.42e-42,7.55325e-05,0.999926	0/0:12:0.936977:6,6:5-7,5-7:8,2,0,0:6,8:NULL:48.6909:326.675,113.385:0.651813,0.651813:1.33637e-13,0.034441,0.965621
-chr1	5722249	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5722268;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999984:4,4:4-4,4-4:18,16,0,2:4,18:3,2:229.225:366.612,131.36:0.0,0.0:0.0,2.02604e-05,0.99998	0/0:18:0.995876:4,4:4-4,4-4:11,5,0,2:4,11:3,2:99.6182:326.675,113.385:0.0,0.0:5.11647e-38,0.0017386,0.998268
-chr1	5727994	.	ATACATACATAC	.	.	.	END=5728005;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:199.933:366.612,131.36:0.0,0.0:0.0,2.5561e-07,1.0	0/0:12:0.919973:3,3:3-3,3-3:7,5,0,0:3,7:NULL:75.9551:326.675,113.385:0.0,0.0:7.27925e-25,0.0435556,0.956519
-chr1	5733779	.	ACCCACCCACCC	.	.	.	END=5733790;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.995933:3,3:3-3,3-3:11,31,0,0:3,11:NULL:317.64:366.612,131.36:0.0,0.0:2.46417e-33,0.00271117,0.997298	0/0:22:0.930157:3,3:3-3,3-3:7,15,0,0:3,7:NULL:161.446:326.675,113.385:0.0,0.0:3.30203e-21,0.0487605,0.951318
-chr1	5742710	.	GGGTGGGTGGGT	.	.	.	END=5742721;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998455:3,3:3-3,3-3:11,27,0,2:3,11:2,2:291.594:366.612,131.36:0.0,0.0:2.44778e-34,0.000965837,0.999036	0/0:42:0.958695:3,3:3-3,3-3:7,33,0,2:3,7:2,2:337.752:326.675,113.385:0.0,0.0:8.78633e-22,0.0259419,0.974111
-chr1	5743415	.	TTTATTTATTTA	.	.	.	END=5743426;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,21,0,0:3,22:NULL:279.685:366.612,131.36:0.0,0.0:0.0,2.47098e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:27,14,0,0:3,27:NULL:231.169:326.675,113.385:0.0,0.0:0.0,4.34196e-08,1.0
-chr1	5743494	.	CCCACCCACCCACCCA	.	.	.	END=5743509;RU=ccca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.987266:4,4:4-4,4-4:10,30,0,0:4,10:NULL:311.546:366.612,131.36:0.0,0.0:2.71427e-30,0.0104821,0.989543	0/0:38:0.997609:4,4:4-4,4-4:12,23,0,3:4,12:2,1|3,2:280.913:326.675,113.385:0.0,0.0:5.76151e-36,0.00168956,0.998315
-chr1	5749087	.	CTCTTGCTCTTGCTCTTG	.	.	.	END=5749104;RU=ctcttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999994:3,3:3-3,3-3:20,23,0,2:3,20:2,2:306.234:366.612,131.36:0.0,0.0:0.0,1.8489e-05,0.999985	0/0:39:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:211.324:326.675,113.385:0.0,0.0:0.0,2.97405e-08,1.0
-chr1	5759909	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5759948;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.929275:26,26:25-26,25-26:11,14,0,14:25,2|26,9:7,1|11,3|15,2|17,1|18,1|19,1|20,1|22,1|23,1|24,1|25,1:288.672:366.612,131.36:0.195027,0.195027:0.0,0.0,1.0	0/0:31:0.96388:20,20:18-21,18-21:13,9,0,7:18,2|20,11:9,1|10,1|11,2|18,1|19,1|20,1:200.219:326.675,113.385:0.49505,0.49505:7.4202e-20,0.0325171,0.967542
-chr1	5762305	.	AGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAG	.	.	END=5762320;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:29:0.990522:8,9:8-9,9-9:8,17,0,4:8,2|9,6:4,1|5,1|7,2:232.974:366.612,131.36:0.419363,0.0990099:6.99306e-19,0.000572497,0.999431	0/0:33:0.999964:8,8:8-8,8-8:18,13,0,2:8,18:5,1|6,1:200.676:326.675,113.385:0.0,0.0:6.50713e-37,2.77855e-05,0.999972
-chr1	5769922	.	TTGTTTGTTTGTTTGTTTGT	TTGTTTGTTTGTTTGTTTGTTTGT	.	.	END=5769941;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999988:6,6:5-6,5-6:19,13,0,6:6,19:3,3|5,3:242.009:366.612,131.36:0.169767,0.169767:0.0,2.48747e-06,1.0	0/0:30:0.999919:5,5:5-5,5-5:16,10,0,4:5,16:4,4:189.343:326.675,113.385:0.0,0.0:0.0,3.41362e-05,0.99997
-chr1	5772735	.	AAATAAATAAATAAAT	.	.	.	END=5772750;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.99989:4,4:4-4,4-4:16,22,0,4:4,16:2,1|3,3:292.378:366.612,131.36:0.0,0.0:0.0,6.38866e-05,0.99994	0/0:28:0.999846:4,4:4-4,4-4:17,11,0,0:4,17:NULL:171.988:326.675,113.385:0.0,0.0:0.0,0.000125561,0.999879
-chr1	5773613	.	GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	GGAGGGGAGGGGAGGGGAGGGGAGG,GGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGG	.	.	END=5773672;RU=ggagg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:4:0.0340636:7,7:3-7,3-7:0,0,0,4:NULL:2,1|3,1|5,1|7,1:28.2102:366.612,131.36:1.30122,1.30122:1.0,0.0,0.0	1/1:7:0.0502929:5,5:4-6,4-6:0,2,0,5:NULL:3,2|4,2|5,1:52.5778:326.675,113.385:0.782491,0.782491:1.0,0.0,0.0
-chr1	5774929	.	AAAATAAAATAAAATAAAATAAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT,AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	.	.	END=5774963;RU=aaaat;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.996759:13,14:4-13,4-14:6,11,0,2:13,4|14,2:2,2:151.098:366.612,131.36:3.55444,4.36098:9.05931e-17,0.00197197,0.998034	0/0:32:0.999866:7,7:6-7,6-7:16,9,0,6:7,16:3,2|4,2|5,2:193.838:326.675,113.385:0.311527,0.311527:6.10738e-38,9.78369e-05,0.999903
-chr1	5775613	.	AAACAAACAAACAAAC	.	.	.	END=5775628;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999805:4,4:4-4,4-4:16,15,0,0:4,16:NULL:202.513:366.612,131.36:0.0,0.0:0.0,0.000142664,0.999858	0/0:42:1.00001:4,4:4-4,4-4:21,16,0,5:4,21:3,5:266.998:326.675,113.385:0.0,0.0:0.0,1.32175e-06,1.0
-chr1	5779912	.	AATAATAATAATAAT	.	.	.	END=5779926;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.989972:5,5:5-5,5-5:10,7,0,0:5,10:NULL:100.348:366.612,131.36:0.0,0.0:2.77029e-22,0.00627996,0.993737	0/0:15:0.738405:5,5:5-5,5-5:5,10,0,0:5,5:NULL:112.525:326.675,113.385:0.29703,0.29703:1.91527e-11,0.178554,0.821514
-chr1	5780434	.	CATTGTGAGCATTGTGAGCATTGTGAG	.	.	.	END=5780460;RU=cattgtgag;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999298:3,3:3-3,3-3:13,17,0,3:3,13:2,3:230.502:366.612,131.36:0.0,0.0:6.7e-43,0.000502598,0.9995	0/0:26:0.999569:3,3:3-3,3-3:15,11,0,0:3,15:NULL:167.59:326.675,113.385:0.0,0.0:0.0,0.000368101,0.999636
-chr1	5781296	.	TTATTATTATTA	TTATTATTA	.	.	END=5781307;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99987:3,3:3-3,3-3:16,16,0,0:3,16:NULL:215.133:366.612,131.36:0.0,0.0:0.999926,7.53605e-05,1.81e-43	0/0:30:1.00001:4,4:4-4,4-4:20,8,0,2:4,20:3,2:164.757:326.675,113.385:0.0,0.0:0.0,3.46079e-06,1.0
-chr1	5783455	.	GTGGGTGGGTGG	GTGGGTGGGTGGGTGGGTGGGTGGGTGG	.	.	END=5783466;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.959332:7,7:7-7,7-7:8,3,0,0:7,8:NULL:63.0944:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/1:47:1.0:3,7:3-3,7-7:24,23,0,0:3,18|7,6:NULL:317.768:326.675,113.385:0.0,0.557277:0.0,2.32863e-16,1.0
-chr1	5785041	.	TAAATAAATAAA	.	.	.	END=5785052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999171:3,3:3-3,3-3:13,10,0,4:3,13:2,4:166.912:366.612,131.36:0.0,0.0:1.023e-42,0.000293774,0.999706	0/0:25:1.0:3,3:3-3,3-3:19,6,0,0:3,19:NULL:132.735:326.675,113.385:0.0,0.0:0.0,9.0504e-06,0.999994
-chr1	5785417	.	TTATTTATTTAT	.	.	.	END=5785428;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:191.362:366.612,131.36:0.0,0.0:0.0,5.39921e-08,1.0	0/0:52:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:296.537:326.675,113.385:0.0,0.0:0.0,1.65893e-09,1.0
-chr1	5791745	.	CACACACACACACA	CACACA,CACACACA	.	.	END=5791758;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.98971:3,4:3-4,3-4:6,27,0,0:3,2|4,4:NULL:277.703:366.612,131.36:0.422855,0.326282:0.999879,0.000123949,6.18505e-28	0/0:67:1.0:7,7:6-7,6-7:43,18,0,6:6,3|7,38|8,2:6,6:405.178:326.675,113.385:0.195027,0.195027:0.0,6.50369e-07,1.0
-chr1	5793084	.	AATAAATAAATA	.	.	.	END=5793095;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999877:3,3:3-3,3-3:17,13,0,2:3,17:2,2:202.902:366.612,131.36:0.0,0.0:0.0,6.08471e-05,0.999941	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:160.328:326.675,113.385:0.0,0.0:0.0,1.96478e-07,1.0
-chr1	5795883	.	TAAATAAATAAA	.	.	.	END=5795894;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:200.221:366.612,131.36:0.0,0.0:0.0,4.6765e-06,0.999995	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:174.643:326.675,113.385:0.0,0.0:0.0,8.64019e-08,1.0
-chr1	5796091	.	TTTGTTTTGTTTTGT	.	.	.	END=5796105;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999901:3,3:3-3,3-3:16,9,0,0:3,16:NULL:145.659:366.612,131.36:0.0,0.0:0.0,6.52105e-05,0.999934	0/0:38:1.0:3,3:3-3,3-3:30,8,0,0:3,30:NULL:194.535:326.675,113.385:0.0,0.0:0.0,4.90667e-09,1.0
-chr1	5796722	.	AATAAATAAATA	.	.	.	END=5796733;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:1-3,1-3:22,13,0,0:3,22:NULL:202.736:366.612,131.36:0.540126,0.540126:0.0,1.23798e-06,1.0	0/0:33:0.999991:3,3:2-3,2-3:18,14,0,0:3,18:NULL:203.111:326.675,113.385:0.35561,0.35561:0.0,1.86871e-05,0.999985
-chr1	5797431	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAAC	.	.	END=5797454;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:1.0:5,5:5-5,5-5:35,10,0,3:5,35:2,1|4,2:256.075:366.612,131.36:0.0,0.0:1.0,1.1966e-10,0.0	0/0:36:1.0:6,6:4-6,4-6:23,6,0,5:6,23:4,3|5,2:186.325:326.675,113.385:0.410384,0.410384:0.0,4.34187e-07,1.0
-chr1	5799311	.	TATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA	.	.	END=5799348;RU=ta;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:9:0.486078:18,18:17-18,17-18:4,4,0,0:18,4:NULL:54.5028:366.612,131.36:0.374147,0.374147:0.76037,0.238382,0.0012729	1/0:14:0.982163:17,19:6-19,6-19:9,2,0,0:17,4|19,5:NULL:65.3645:326.675,113.385:4.72276,4.99312:1.88777e-05,0.990785,0.00921863
-chr1	5799404	.	TAAATAAATAAA	.	.	.	END=5799415;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.988207:3,3:3-3,3-3:10,8,0,0:3,10:NULL:113.088:366.612,131.36:0.0,0.0:9.73386e-29,0.00654213,0.993474	0/0:18:0.998939:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.1688:326.675,113.385:0.0,0.0:1.8887e-37,0.000540242,0.999462
-chr1	5800120	.	TTATTATTATTATTA	.	.	.	END=5800134;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999937:5,5:5-5,5-5:18,11,0,0:5,18:NULL:179.431:366.612,131.36:0.0,0.0:0.0,4.3944e-05,0.999957	0/0:22:0.99239:5,5:5-5,5-5:11,11,0,0:5,11:NULL:145.145:326.675,113.385:0.0,0.0:9.87934e-32,0.00529762,0.994716
-chr1	5803800	.	CAACAACAACAACAA	CAACAACAACAACAACAACAACAACAACAACAACAA	.	.	END=5803814;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999723:12,12:11-12,11-12:15,13,0,10:12,15:4,3|6,2|7,1|8,2|11,2:256.851:366.612,131.36:0.169767,0.169767:0.0,0.0,1.0	0/0:37:1.0:5,5:5-5,5-5:24,8,0,5:5,24:4,5:208.194:326.675,113.385:0.0,0.0:0.0,1.5221e-07,1.0
-chr1	5813834	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT,TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=5813884;RU=tct;PERIOD=3;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:14:0.279533:18,23:17-23,17-23:2,3,0,8:18,2:4,1|7,1|9,1|11,1|12,1|17,1|18,1|23,1:97.0994:366.612,131.36:1.15753,2.37116:1.86078e-27,9.98403e-06,0.999993	1/0:45:0.94456:16,17:16-17,17-17:12,23,0,10:16,3|17,9:4,1|7,1|9,1|10,1|11,2|13,1|14,1|15,1|16,1:356.573:326.675,113.385:0.469019,0.0:1.41439e-15,0.94468,0.0554052
-chr1	5813889	.	TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	TTCTT,TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTT	.	.	END=5813933;RU=ttctt;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/2:51:0.610104:9,12:9-9,11-13:9,22,0,20:9,9:3,2|4,2|5,1|6,4|7,3|8,5|11,2|12,1:399.269:326.675,113.385:0.0,0.613702:1e-45,9.28955e-22,1.0
-chr1	5819521	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=5819540;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.998514:6,6:6-6,6-6:14,23,0,5:6,14:2,1|3,1|4,1|5,2:314.068:366.612,131.36:0.0,0.0:0.0,0.000353151,0.999651	0/0:40:0.999981:5,5:5-5,5-5:18,15,0,7:5,18:2,1|3,4|4,2:261.639:326.675,113.385:0.0,0.0:0.0,1.39299e-05,0.999987
-chr1	5829633	.	TTCCTTCCTTCC	.	.	.	END=5829644;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.998494:3,3:3-3,3-3:13,14,0,0:3,13:NULL:182.139:366.612,131.36:0.0,0.0:1.5e-44,0.000928731,0.999074	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:244.365:326.675,113.385:0.0,0.0:0.0,5.32516e-08,1.0
-chr1	5831560	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATA	.	.	END=5831615;RU=gata;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0234766:1,1:1-3,1-3:0,10,0,0:NULL:NULL:87.0303:366.612,131.36:0.339533,0.339533:0.76147,0.231543,0.00702052	0/0:43:0.998937:14,14:9-15,9-15:13,13,0,15:14,13:4,1|5,1|8,3|9,3|11,1|12,1|13,5:282.937:326.675,113.385:1.39944,1.39944:8.61859e-31,0.000348108,0.999652
-chr1	5832533	.	AACAAACAAACA	AACAAACA	.	.	END=5832544;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0412102:2,2:1-3,1-3:0,16,0,0:NULL:NULL:145.95:366.612,131.36:0.587088,0.587088:0.137906,0.489938,0.372325	0/0:34:0.997564:3,3:3-3,3-3:13,21,0,0:3,13:NULL:243.631:326.675,113.385:0.0,0.0:2.98e-43,0.00208502,0.99792
-chr1	5833064	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=5833091;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.0:6,6:6-6,6-6:26,8,0,2:6,26:3,1|5,1:191.71:366.612,131.36:0.0,0.0:1.0,6.68227e-08,0.0	0/0:49:1.00001:7,7:7-7,7-7:23,16,0,10:7,23:3,2|4,2|5,2|6,4:319.451:326.675,113.385:0.0,0.0:0.0,4.69348e-07,1.0
-chr1	5836792	.	TTTTGTTTTGTTTTG	.	.	.	END=5836806;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.0532816:3,3:1-6,1-6:0,14,0,2:NULL:3,2:143.036:366.612,131.36:1.5536,1.5536:2.74641e-16,0.419007,0.581072	0/0:35:1.0:3,3:3-3,3-3:28,4,0,2:3,28:2,1|3,1:161.592:326.675,113.385:0.0,0.0:0.0,8.26137e-09,1.0
-chr1	5843531	.	GTTGTTGTTGTT	GTTGTTGTT	.	.	END=5843542;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.252266:3,3:2-4,2-4:2,17,0,0:3,2:NULL:166.713:366.612,131.36:0.665211,0.665211:0.577122,0.422964,1.17689e-06	0/0:28:0.999906:4,4:4-4,4-4:17,11,0,0:4,17:NULL:166.827:326.675,113.385:0.0,0.0:1.1e-43,6.42646e-05,0.99994
-chr1	5844583	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=5844632;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.193242:25,25:22-25,22-25:2,10,0,0:25,2:NULL:100.105:366.612,131.36:1.12192,1.12192:0.0045807,0.480536,0.514971	0/0:34:0.348451:25,25:23-25,23-25:8,10,0,15:24,3|25,5:5,1|6,1|11,2|12,2|13,1|14,1|16,1|18,1|20,3|23,1|24,1:254.626:326.675,113.385:0.561658,0.561658:6.94529e-05,0.630722,0.369266
-chr1	5861282	.	ATATATATATAT	AT	.	.	END=5861293;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.00357437:1,1:1-7,1-7:0,7,0,0:NULL:NULL:64.8289:366.612,131.36:2.00328,2.00328:0.0589627,0.398793,0.542412	0/0:23:0.999911:6,6:6-6,6-6:17,6,0,0:6,17:NULL:118.354:326.675,113.385:0.0,0.0:2.05423e-27,5.61991e-05,0.999947
-chr1	5863544	.	GGGTGGGTGGGT	GGGT	.	.	END=5863555;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.0278135:1,1:3-3,3-3:0,0,0,0:NULL:NULL:-25.0:366.612,131.36:0.0,0.0:0.111169,0.444566,0.444358	0/0:36:0.849824:3,3:3-3,3-3:6,28,0,2:3,6:2,2:289.551:326.675,113.385:0.278639,0.278639:8.24928e-16,0.0757857,0.924308
-chr1	5864371	.	ATTAATTAATTA	ATTAATTAATTAATTA	.	.	END=5864382;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.992643:4,4:4-4,4-4:11,21,0,0:4,11:NULL:235.41:366.612,131.36:0.0,0.0:1.1e-44,0.00467797,0.995334	0/0:26:0.999979:3,3:3-3,3-3:18,8,0,0:3,18:NULL:146.274:326.675,113.385:0.0,0.0:0.0,1.68976e-05,0.999986
-chr1	5865370	.	TCTCTCTCTCTCTC	TCTC	.	.	END=5865383;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0027445:2,2:1-4,1-4:0,6,0,0:NULL:NULL:53.8209:366.612,131.36:0.789724,0.789724:0.0679048,0.427125,0.505172	0/0:33:1.00001:7,7:7-8,7-8:20,8,0,4:7,20:4,1|5,3:182.858:326.675,113.385:0.253975,0.253975:7.068e-42,5.16475e-06,0.999995
-chr1	5868012	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=5868059;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.34883:30,30:27-30,27-30:3,9,0,8:30,3:10,1|11,1|15,1|17,1|18,1|25,1|27,2:157.6:366.612,131.36:0.5093,0.5093:0.0,0.0,1.0	0/0:38:0.848199:24,24:22-24,22-24:7,13,0,16:24,7:7,1|9,1|10,1|13,2|14,2|15,3|16,1|21,1|22,1|23,2|24,1:283.199:326.675,113.385:0.467344,0.467344:4.72747e-16,0.0181405,0.9819
-chr1	5871062	.	TATTTTATTTTATTT	.	.	.	END=5871076;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.864268:3,3:3-3,3-3:6,0,0,0:3,6:NULL:23.6225:366.612,131.36:0.0,0.0:1.2182e-18,0.0541899,0.945893	0/0:32:0.999792:3,3:3-3,3-3:15,15,0,2:3,15:2,2:213.109:326.675,113.385:0.0,0.0:3e-45,0.000128777,0.999873
-chr1	5877999	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=5878042;RU=gata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:22:0.950424:12,12:12-13,12-13:9,10,0,2:12,9:3,2:143.371:366.612,131.36:0.469019,0.469019:2.10753e-26,0.0189762,0.981064	1/1:37:0.999836:10,10:10-10,10-10:16,15,0,6:10,16:5,1|7,2|8,1|9,2:251.085:326.675,113.385:0.0,0.0:0.999909,9.38047e-05,6.43078e-23
-chr1	5882501	.	TAAATAAATAAA	.	.	.	END=5882512;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:24,14,0,0:3,24:NULL:227.145:366.612,131.36:0.0,0.0:0.0,7.88834e-07,1.0	0/0:46:1.0:3,3:3-3,3-3:36,10,0,0:3,36:NULL:229.319:326.675,113.385:0.0,0.0:0.0,1.04705e-10,1.0
-chr1	5887687	.	AGAATAGAATAGAAT	.	.	.	END=5887701;RU=agaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:21,17,0,0:3,21:NULL:243.932:366.612,131.36:0.0,0.0:0.0,4.85605e-06,0.999995	0/0:41:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:220.324:326.675,113.385:0.0,0.0:0.0,6.13223e-09,1.0
-chr1	5889757	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5889788;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.56051:19,20:18-19,18-21:12,21,0,13:18,4|19,8:5,2|6,1|7,3|13,1|14,1|16,1|18,2|20,2:371.436:366.612,131.36:0.298675,0.638748:0.0,9.94627e-11,1.0	0/0:71:0.995842:16,16:16-17,16-17:26,18,0,25:16,23|17,3:5,1|6,1|7,2|8,1|9,2|10,1|11,4|12,3|13,3|14,4|15,3:487.37:326.675,113.385:0.284901,0.284901:5.44931e-31,2.91005e-07,1.0
-chr1	5890307	.	ACAAAACAAAACAAA	.	.	.	END=5890321;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999566:3,3:3-3,3-3:15,24,0,0:3,15:NULL:282.549:366.612,131.36:0.0,0.0:0.0,0.000391388,0.999613	0/0:37:1.00001:3,3:3-3,3-3:21,14,0,2:3,21:2,2:227.577:326.675,113.385:0.0,0.0:0.0,2.32011e-06,1.0
-chr1	5896268	.	TAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=5896295;RU=taga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.620046:11,11:7-11,7-11:4,11,0,5:11,4:8,3|9,1|11,1:157.745:366.612,131.36:1.2298,1.2298:0.0,0.0275314,0.972524	0/0:40:1.00001:7,7:7-7,7-7:22,14,0,4:7,22:3,1|4,1|5,1|6,1:252.308:326.675,113.385:0.0,0.0:2.80159e-28,3.30435e-06,1.0
-chr1	5896295	.	AGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	.	END=5896330;RU=agac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.568114:9,9:8-9,8-9:4,10,0,5:9,4:5,2|6,1|7,2:145.0:366.612,131.36:0.484441,0.484441:4.39201e-09,0.215137,0.784907	0/0:38:0.999706:9,9:9-9,9-9:15,15,0,8:9,15:5,2|6,1|7,3|8,2:261.206:326.675,113.385:0.0,0.0:1.00938e-31,0.000138485,0.999864
-chr1	5897769	.	ATATATATATAT	ATATATATATATAT	.	.	END=5897780;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:1.0:6,7:6-6,6-8:30,25,0,0:6,16|7,11|8,3:NULL:370.665:366.612,131.36:0.0,0.263076:2.2259e-32,1.54871e-13,1.0	0/0:49:0.99999:6,6:6-6,6-6:32,15,0,0:6,29|7,3:NULL:275.497:326.675,113.385:0.0990099,0.0990099:3.05501e-34,1.71758e-08,1.0
-chr1	5897783	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=5897826;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.97053:23,23:22-24,22-24:19,23,0,11:22,3|23,14|24,2:4,1|5,1|9,1|10,1|14,1|15,1|19,2|20,1|21,1|22,1:391.072:366.612,131.36:0.701085,0.701085:1.6511e-30,3.98863e-05,0.999963	0/0:66:0.97549:22,22:19-23,19-23:16,22,0,25:22,14|23,2:5,2|6,1|7,3|9,2|10,4|11,3|12,2|13,3|14,2|19,2|21,1:474.739:326.675,113.385:0.657354,0.657354:1.16935e-16,0.000428123,0.999575
-chr1	5897969	.	ACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=5897986;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:49:0.471053:9,10:9-9,8-10:17,18,0,14:8,2|9,15:4,1|6,2|7,1|8,7|9,2|10,1:358.011:366.612,131.36:0.0,0.717122:3.53e-43,4.02365e-06,0.999995	0/0:55:0.944427:9,9:7-19,7-19:29,17,0,8:8,3|9,26:6,4|7,2|8,1|16,1:361.609:326.675,113.385:3.5902,3.5902:1.1e-44,5.74913e-05,0.999942
-chr1	5898251	.	TTGTTGTTGTTG	.	.	.	END=5898262;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:29,10,0,0:4,29:NULL:204.271:366.612,131.36:0.0,0.0:0.0,1.64728e-08,1.0	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:178.491:326.675,113.385:0.0,0.0:0.0,1.01053e-05,0.999993
-chr1	5899946	.	CATACATACATACATACATACATACATACATACATACATA	CATACATACATACATACATACATACATACATACATA	.	.	END=5899985;RU=cata;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.524396:9,9:8-9,8-9:14,12,0,9:8,3|9,11:3,1|5,3|6,1|7,3|8,1:244.737:366.612,131.36:0.481803,0.481803:0.999697,0.000306133,1.72282e-16	0/0:43:0.999909:10,10:10-10,10-10:17,13,0,12:10,17:3,1|4,1|5,2|6,1|7,3|8,3|9,1:279.428:326.675,113.385:0.0990099,0.0990099:2.73826e-25,4.24703e-05,0.999957
-chr1	5899987	.	GTATGTATGTAT	.	.	.	END=5899998;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999084:3,3:3-3,3-3:13,13,0,0:3,13:NULL:172.571:366.612,131.36:0.0,0.0:2.75199e-34,0.000516341,0.999485	0/0:29:1.0:3,3:3-3,3-3:19,10,0,0:3,19:NULL:170.457:326.675,113.385:0.0,0.0:0.0,1.08231e-05,0.999993
-chr1	5902689	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA	.	.	END=5902718;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.872688:16,16:12-16,12-16:6,21,0,15:16,6:6,2|8,1|9,3|10,1|11,2|12,1|14,4|15,1:345.735:366.612,131.36:1.43308,1.43308:1.11668e-19,0.0185593,0.981481	0/0:49:0.997902:15,15:13-15,13-15:20,14,0,13:13,2|15,18:4,2|6,1|7,1|8,1|11,2|12,2|13,3|14,1:318.723:326.675,113.385:0.833449,0.833449:1.42274e-22,0.00208513,0.99792
-chr1	5903515	.	TGTTTTGTTTTGTTT	.	.	.	END=5903529;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999941:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.876:366.612,131.36:0.0,0.0:0.0,5.57718e-05,0.999948	0/0:20:0.999876:3,3:3-3,3-3:16,4,0,0:3,16:NULL:103.791:326.675,113.385:0.0,0.0:0.0,6.71815e-05,0.999934
-chr1	5907759	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5907810;RU=gt;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.0838707:25,25:23-26,23-26:0,30,0,12:NULL:4,1|8,1|11,1|14,1|15,1|18,2|21,2|23,1|24,1|25,1:364.098:366.612,131.36:0.655263,0.655263:0.251683,0.543114,0.205209	1/0:58:0.942176:25,26:24-26,25-26:7,26,0,24:25,4|26,3:4,1|5,2|6,1|7,3|8,1|10,1|11,1|12,2|13,2|16,1|19,2|20,1|22,1|23,1|24,1|25,3:460.169:326.675,113.385:0.314035,0.429525:0.0225164,0.950009,0.02757
-chr1	5912141	.	TAAATAAATAAA	.	.	.	END=5912152;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:22,16,0,0:3,22:NULL:237.723:366.612,131.36:0.0,0.0:0.0,3.11145e-06,1.0	0/0:55:1.0:3,3:3-3,3-3:35,18,0,2:3,35:2,2:314.115:326.675,113.385:0.0,0.0:0.0,1.17494e-10,1.0
-chr1	5915677	.	CACCACCACCACCAC	.	.	.	END=5915691;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:93:1.0:5,5:5-5,5-5:61,27,0,4:5,61:3,2|4,2:522.376:366.612,131.36:0.0,0.0:0.0,2.71225e-18,1.0	0/0:95:1.0:5,5:5-5,5-5:75,14,0,5:5,75:4,5:454.381:326.675,113.385:0.0,0.0:0.0,8.44432e-23,1.0
-chr1	5915768	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5915801;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:73:0.780363:20,20:20-21,20-21:34,20,0,18:18,2|19,5|20,22|21,5:4,1|5,1|6,3|9,3|10,1|11,1|12,1|14,1|15,2|16,2|18,2:516.966:366.612,131.36:0.451989,0.451989:0.0,8.05231e-11,1.0	0/0:85:0.999597:17,17:17-22,17-22:41,25,0,17:16,7|17,30|18,4:4,2|8,1|9,2|10,2|12,1|13,3|14,3|16,2|22,1:583.029:326.675,113.385:2.24099,2.24099:5.98141e-35,8.34372e-06,0.999994
-chr1	5918994	.	CCCTCCCTCCCT	.	.	.	END=5919005;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999912:3,3:3-3,3-3:16,13,0,0:3,16:NULL:186.507:366.612,131.36:0.0,0.0:0.0,6.56808e-05,0.999934	0/0:21:0.999354:3,3:3-3,3-3:14,7,0,0:3,14:NULL:117.558:326.675,113.385:0.0,0.0:1e-45,0.00039642,0.999606
-chr1	5919625	.	ATATATATATAT	.	.	.	END=5919636;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999156:6,6:6-6,6-6:14,22,0,0:6,14:NULL:260.754:366.612,131.36:0.0,0.0:2.20629e-24,0.000583008,0.999422	0/0:29:0.999622:6,6:6-7,6-7:15,13,0,0:6,15:NULL:171.564:326.675,113.385:0.195027,0.195027:5.98538e-26,0.000235845,0.999766
-chr1	5919950	.	GATGATGATGAT	.	.	.	END=5919961;RU=gat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999713:4,4:4-4,4-4:16,15,0,0:4,16:NULL:207.353:366.612,131.36:0.0,0.0:1.2002e-40,0.000204791,0.999797	0/0:34:1.00001:4,4:4-4,4-4:22,10,0,2:4,22:3,2:196.784:326.675,113.385:0.0,0.0:0.0,8.43741e-07,1.0
-chr1	5922252	.	ATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATAT	.	.	END=5922279;RU=at;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:13:0.646279:16,17:16-18,17-18:6,6,0,0:16,2|17,4:NULL:90.1045:366.612,131.36:0.617841,0.304526:3.00658e-13,0.0144617,0.98557	0/0:17:0.620937:14,14:13-15,13-15:5,10,0,0:14,5:NULL:114.364:326.675,113.385:0.421694,0.421694:0.000215381,0.241347,0.758457
-chr1	5926025	.	TCTTTCTTTCTT	.	.	.	END=5926036;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:194.3:366.612,131.36:0.0,0.0:0.0,1.13297e-05,0.999993	0/0:31:0.999998:3,3:3-3,3-3:18,10,0,3:3,18:2,3:188.06:326.675,113.385:0.0,0.0:0.0,1.04438e-05,0.999993
-chr1	5927629	.	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	GATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAA	.	.	END=5927700;RU=gatgaa;PERIOD=6;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:92:0.497956:11,11:10-11,10-11:15,43,0,34:10,2|11,13:2,1|3,1|4,2|5,5|6,6|7,6|8,2|9,6|10,5:718.283:366.612,131.36:0.481803,0.481803:0.999993,1.10196e-05,4.5566e-31	0/0:52:0.844477:12,12:9-12,9-12:6,27,0,19:12,6:2,2|3,3|4,2|5,2|6,1|7,1|8,1|9,4|11,3:411.108:326.675,113.385:0.619742,0.619742:7.03679e-18,0.137528,0.862561
-chr1	5927964	.	ACCCACCCACCC	.	.	.	END=5927975;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:24,20,0,4:3,24:2,4:310.166:366.612,131.36:0.0,0.0:0.0,1.91414e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.966:326.675,113.385:0.0,0.0:0.0,6.46021e-06,0.999995
-chr1	5929823	.	TTTGTTTGTTTG	.	.	.	END=5929834;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,20,0,0:3,29:NULL:296.826:366.612,131.36:0.0,0.0:0.0,9.32122e-09,1.0	0/0:20:0.999841:3,3:3-3,3-3:16,2,0,2:3,16:2,2:98.7639:326.675,113.385:0.0,0.0:0.0,6.37898e-05,0.99994
-chr1	5930224	.	GTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=5930247;RU=gtt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:8,8:8-8,8-8:27,12,0,4:8,27:4,2|5,1|7,1:252.24:366.612,131.36:0.0,0.0:0.0,4.44333e-08,1.0	0/0:46:1.0:8,8:8-8,8-8:27,13,0,5:8,27:3,1|5,4:263.401:326.675,113.385:0.19802,0.19802:0.0,9.0939e-08,1.0
-chr1	5934390	.	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC	.	.	END=5934474;RU=tttcc;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.301504:14,14:11-14,11-14:2,14,0,21:14,2:3,2|4,2|5,3|6,2|7,2|8,1|9,2|10,3|11,2|12,1|13,1:286.328:366.612,131.36:0.676608,0.676608:0.927216,0.0728785,3.47771e-10	0/0:24:0.199924:17,17:14-17,14-17:2,11,0,11:17,2:3,1|4,2|6,1|9,2|10,3|12,1|13,1:185.373:326.675,113.385:1.49816,1.49816:8.06284e-05,0.626446,0.373523
-chr1	5940366	.	AATTAATTAATT	.	.	.	END=5940377;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999654:3,3:3-3,3-3:15,10,0,0:3,15:NULL:147.578:366.612,131.36:0.0,0.0:0.0,0.000189184,0.999812	0/0:25:0.999916:3,3:3-3,3-3:17,8,0,0:3,17:NULL:143.032:326.675,113.385:0.0,0.0:0.0,5.15884e-05,0.999949
-chr1	5940451	.	TTTGTTTTGTTTTGT	.	.	.	END=5940465;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999994:3,3:3-3,3-3:19,8,0,0:3,19:NULL:147.155:366.612,131.36:0.0,0.0:0.0,1.23806e-05,0.999987	0/0:36:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:215.504:326.675,113.385:0.0,0.0:0.0,1.34636e-06,1.0
-chr1	5941150	.	ACACACACACAC	.	.	.	END=5941161;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:20,15,0,2:6,20:4,1|5,1:232.608:366.612,131.36:0.0,0.0:3.66e-43,3.9473e-06,0.999995	0/0:43:1.0:6,6:6-6,6-6:20,20,0,3:6,20:4,1|5,2:278.91:326.675,113.385:0.0,0.0:5.56e-43,3.98785e-06,0.999995
-chr1	5942017	.	ACAAAACAAAACAAA	.	.	.	END=5942031;RU=acaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:166.874:366.612,131.36:0.0,0.0:0.0,1.36527e-06,1.0	0/0:20:0.999954:3,3:3-3,3-3:17,1,0,2:3,17:2,1|3,1:90.8318:326.675,113.385:0.0,0.0:0.0,1.14842e-05,0.999988
-chr1	5945567	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=5945590;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999936:6,6:5-6,5-6:17,17,0,11:6,17:2,2|3,2|4,4|5,3:307.495:366.612,131.36:0.253975,0.253975:0.0,3.38207e-05,0.99997	0/0:45:1.00001:6,6:6-6,6-6:22,18,0,5:6,22:3,1|4,1|5,3:292.462:326.675,113.385:0.0,0.0:0.0,9.82135e-07,1.0
-chr1	5946795	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=5946832;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.472493:22,22:21-22,21-22:12,9,0,11:21,4|22,8:6,1|7,1|8,1|11,2|12,1|13,1|14,1|16,1|20,2:231.246:366.612,131.36:0.489073,0.489073:6.2e-44,7.10627e-05,0.999932	0/0:46:0.991405:19,19:4-21,4-21:14,19,0,9:18,2|19,12:5,1|6,1|7,1|8,1|9,1|10,1|12,1|17,1|19,1:315.022:326.675,113.385:7.29921,7.29921:2.95628e-20,0.00747542,0.992543
-chr1	5947011	.	TCCATCCATCCA	.	.	.	END=5947022;RU=tcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:27,17,0,0:3,27:NULL:260.132:366.612,131.36:0.0,0.0:0.0,3.17725e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:31,11,0,0:3,31:NULL:223.229:326.675,113.385:0.0,0.0:0.0,2.78806e-09,1.0
-chr1	5953047	.	TCATTCATTCATTCAT	.	.	.	END=5953062;RU=tcat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.998895:4,4:3-4,3-4:14,21,0,3:4,14:3,3:275.253:366.612,131.36:0.412766,0.412766:0.0,0.000556861,0.999446	0/0:36:1.00001:4,4:4-4,4-4:22,12,0,2:4,22:3,2:214.53:326.675,113.385:0.0,0.0:0.0,1.25837e-06,1.0
-chr1	5953771	.	ATTTTATTTTATTTT	.	.	.	END=5953785;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:215.118:366.612,131.36:0.0,0.0:0.0,7.59821e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:22,17,0,2:3,22:2,2:259.852:326.675,113.385:0.0,0.0:0.0,1.55559e-06,1.0
-chr1	5956109	.	AGAGAGAGAGAG	.	.	.	END=5956120;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999051:6,6:6-6,6-6:14,17,0,0:6,14:NULL:213.09:366.612,131.36:0.0,0.0:1.35846e-32,0.000674371,0.999331	0/0:37:1.0:6,6:4-6,4-6:19,14,0,2:6,19:4,1|5,1:211.292:326.675,113.385:0.699966,0.699966:1.1e-44,1.05018e-05,0.999993
-chr1	5956842	.	TTCTTTCTTTCT	.	.	.	END=5956853;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:34,13,0,0:3,34:NULL:257.7:366.612,131.36:0.0,0.0:0.0,2.2876e-10,1.0	0/0:38:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:236.194:326.675,113.385:0.0,0.0:0.0,2.68644e-06,1.0
-chr1	5958262	.	GAAGGAAGGAAGGAAGGAAG	.	.	.	END=5958281;RU=gaag;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:22,15,0,0:5,22:NULL:229.447:366.612,131.36:0.0,0.0:0.0,3.26586e-06,1.0	0/0:47:1.0:5,5:5-5,5-5:27,16,0,4:5,27:2,1|4,3:283.017:326.675,113.385:0.0,0.0:0.0,4.85953e-08,1.0
-chr1	5963266	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	.	END=5963305;RU=gttt;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:10,10:10-10,10-10:28,19,0,9:10,28:3,1|4,1|5,2|6,2|7,1|8,2:366.047:366.612,131.36:0.0,0.0:0.0,8.63647e-08,1.0	0/0:53:1.0:10,10:10-10,10-10:24,12,0,17:10,24:3,1|4,2|5,3|6,1|8,5|9,5:336.913:326.675,113.385:0.0,0.0:0.0,2.83696e-07,1.0
-chr1	5964606	.	ATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT	.	.	END=5964619;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.886418:12,13:7-13,7-14:14,23,0,0:10,2|11,2|12,4|13,6:NULL:290.803:366.612,131.36:1.66142,1.61043:1.54621e-36,9.18377e-06,0.999993	0/0:27:0.836108:7,7:4-7,4-7:14,10,0,0:6,3|7,11:NULL:160.179:326.675,113.385:0.862467,0.862467:2.47795e-12,0.162866,0.837207
-chr1	5964620	.	ACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC	.	.	END=5964641;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.187232:17,17:11-15,11-15:5,29,0,4:17,5:4,1|8,2|9,1:321.414:366.612,131.36:1.56711,1.56711:4.96889e-16,0.413864,0.58621	0/0:35:0.445205:11,11:9-11,9-11:12,14,0,6:10,3|11,9:4,1|5,1|6,1|9,2|10,1:234.396:326.675,113.385:0.708457,0.708457:2.48055e-09,0.553166,0.44694
-chr1	5969864	.	CCACCCACCCACCCAC	.	.	.	END=5969879;RU=ccac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:4,4:4-4,4-4:33,31,0,3:4,33:2,1|3,2:441.455:366.612,131.36:0.0,0.0:0.0,4.1973e-10,1.0	0/0:57:1.0:4,4:4-4,4-4:33,22,0,2:4,33:3,2:343.641:326.675,113.385:0.0,0.0:0.0,6.62047e-10,1.0
-chr1	5971172	.	TGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTT	.	.	END=5971195;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999887:4,4:4-4,4-4:16,23,0,2:4,16:2,1|3,1:291.383:366.612,131.36:0.0,0.0:0.999985,1.85909e-05,0.0	0/0:49:0.99981:6,6:5-6,5-6:28,17,0,4:5,2|6,26:2,1|3,1|4,1|5,1:310.005:326.675,113.385:0.298675,0.298675:0.0,0.000194253,0.99981
-chr1	5973006	.	ACACACACACAC	ACACACACACACACAC	.	.	END=5973017;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.937908:8,8:7-8,7-8:15,17,0,2:7,2|8,13:6,2:237.838:366.612,131.36:0.40582,0.40582:0.0,8.97946e-05,0.999911	0/0:18:0.983031:6,6:6-6,6-6:9,6,0,3:6,9:5,3:112.405:326.675,113.385:0.0,0.0:3.2648e-20,0.00572335,0.994293
-chr1	5974638	.	AAATAAATAAAT	.	.	.	END=5974649;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.994209:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.3759:366.612,131.36:0.0,0.0:2.8099e-36,0.00287796,0.997132	0/0:22:0.736692:3,3:1-3,1-3:5,17,0,0:3,5:NULL:171.101:326.675,113.385:0.507951,0.507951:1.13701e-16,0.20747,0.792576
-chr1	5974827	.	ATAATAATAATAATAATA	.	.	.	END=5974844;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.949345:6,6:4-6,4-6:8,0,0,2:6,8:3,2:47.1122:366.612,131.36:0.957892,0.957892:8.02138e-18,0.0264945,0.973556	0/0:23:0.996343:6,6:6-6,6-6:11,8,0,4:6,11:3,1|4,2|5,1:152.714:326.675,113.385:0.0,0.0:3.15835e-24,0.00184095,0.998163
-chr1	5974849	.	AAATTAAATTAAATTAAATT	AAATTAAATTAAATT	.	.	END=5974868;RU=aaatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.0334915:3,3:3-4,3-4:0,0,0,2:NULL:3,2:14.0982:366.612,131.36:0.44763,0.44763:0.0669411,0.400408,0.532829	0/0:21:0.964528:4,4:4-4,4-4:8,11,0,2:4,8:2,2:149.833:326.675,113.385:0.19802,0.19802:4.66856e-25,0.0264723,0.973578
-chr1	5976547	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=5976566;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997467:4,4:4-4,4-4:12,11,0,2:4,12:3,2:157.502:366.612,131.36:0.0,0.0:1.78561e-39,0.0011616,0.998845	0/0:22:0.993463:4,4:4-4,4-4:10,10,0,2:4,10:3,2:140.83:326.675,113.385:0.0,0.0:3.90347e-33,0.00345787,0.99655
-chr1	5978570	.	AAAGAAAGAAAG	.	.	.	END=5978581;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:30,15,0,2:3,30:2,2:271.734:366.612,131.36:0.0,0.0:0.0,5.8207e-09,1.0	0/0:37:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:187.058:326.675,113.385:0.0,0.0:0.0,1.19858e-08,1.0
-chr1	5981538	.	ATAATAATAATA	.	.	.	END=5981549;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.993889:4,4:4-4,4-4:11,13,0,0:4,11:NULL:163.313:366.612,131.36:0.0,0.0:1.29433e-29,0.00370406,0.996307	0/0:24:0.9988:4,4:4-4,4-4:13,11,0,0:4,13:NULL:148.367:326.675,113.385:0.0,0.0:2.02401e-34,0.000860891,0.999142
-chr1	5990630	.	TGGATTATCTGGATTATCTGGATTATC	TGGATTATC	.	.	END=5990656;RU=tggattatc;PERIOD=9;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.220125:1,1:1-2,1-2:0,19,0,0:NULL:NULL:165.643:366.612,131.36:0.311527,0.311527:0.586116,0.37447,0.0395355	0/0:42:1.0:3,3:3-3,3-3:22,16,0,4:3,22:2,4:261.29:326.675,113.385:0.0,0.0:0.0,2.32205e-06,1.0
-chr1	5990673	.	ACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=5990684;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.322577:20,20:19-20,19-20:2,14,0,6:20,2:4,1|8,2|9,1|12,1|20,1:184.95:366.612,131.36:0.661813,0.661813:0.0,0.0,1.0	0/0:36:1.0:6,6:6-6,6-6:20,13,0,3:6,20:4,1|5,2:222.117:326.675,113.385:0.0,0.0:1.71735e-39,4.97916e-06,0.999995
-chr1	5991174	.	AAAACAAAACAAAAC	AAAAC	.	.	END=5991188;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0600654:1,1:1-3,1-3:0,10,0,0:NULL:NULL:92.4002:366.612,131.36:0.485855,0.485855:0.185855,0.498351,0.315903	0/0:23:0.999999:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.705:326.675,113.385:0.0,0.0:0.0,9.51013e-06,0.999993
-chr1	5999275	.	GGGTGGGTGGGT	GGGT	.	.	END=5999286;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.00981823:1,1:1-2,1-2:0,7,0,0:NULL:NULL:58.3651:366.612,131.36:0.469019,0.469019:0.0380205,0.352752,0.609338	0/0:53:0.932367:3,3:3-3,3-3:7,44,0,2:3,7:2,2:430.394:326.675,113.385:0.278639,0.278639:6.02717e-20,0.0580408,0.942047
-chr1	6002341	.	AAATAAATAAAT	AAAT	.	.	END=6002352;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0846653:1,1:1-1,1-1:0,18,0,0:NULL:NULL:164.799:366.612,131.36:0.139319,0.139319:0.190566,0.5221,0.287427	0/0:14:0.990347:3,3:3-3,3-3:10,4,0,0:3,10:NULL:77.6385:326.675,113.385:0.0,0.0:9.0193e-33,0.00438464,0.995628
-chr1	6003957	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTG,TTTGTTTG	.	.	END=6003980;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.0340808:1,2:1-3,1-3:0,9,0,0:NULL:NULL:82.4126:366.612,131.36:0.86417,0.863602:0.273918,0.532388,0.193697	0/0:16:0.993524:6,6:6-6,6-6:11,5,0,0:6,11:NULL:89.6854:326.675,113.385:0.0,0.0:5.95831e-34,0.00386801,0.996142
-chr1	6007179	.	TGTGTGTGTGTGTG	.	.	.	END=6007192;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:7,7:7-7,7-7:21,10,0,0:7,21:NULL:175.581:366.612,131.36:0.0990099,0.0990099:6.33055e-39,4.40377e-06,0.999995	0/0:23:0.999991:7,7:7-7,7-7:19,4,0,0:7,19:NULL:113.025:326.675,113.385:0.0,0.0:2.37576e-35,1.83346e-05,0.999985
-chr1	6008813	.	CACACACACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6008864;RU=ca;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0685445:24,24:21-24,21-24:0,10,0,16:NULL:7,2|9,1|11,2|12,2|14,1|15,1|16,1|20,2|22,1|23,1|24,2:215.675:366.612,131.36:1.34544,1.34544:0.376805,0.480889,0.142383	0/0:24:0.550003:26,26:25-26,25-26:5,10,0,8:26,5:6,1|7,1|8,1|11,3|13,1|16,1:179.894:326.675,113.385:0.35561,0.35561:3.90968e-06,0.288238,0.711762
-chr1	6010711	.	ATTTATTTATTT	.	.	.	END=6010722;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.614864:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6359:366.612,131.36:0.0,0.0:8.92207e-14,0.153957,0.846123	0/0:20:0.999907:3,3:3-3,3-3:16,4,0,0:3,16:NULL:100.387:326.675,113.385:0.0,0.0:0.0,5.41553e-05,0.999948
-chr1	6016751	.	CATACATACATA	.	.	.	END=6016762;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:186.522:366.612,131.36:0.0,0.0:0.0,2.81512e-07,1.0	0/0:20:0.999492:3,3:3-3,3-3:14,6,0,0:3,14:NULL:111.222:326.675,113.385:0.0,0.0:0.0,0.000290229,0.999712
-chr1	6022355	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=6022386;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0275954:1,1:1-4,1-4:0,12,0,0:NULL:NULL:111.669:366.612,131.36:0.805213,0.805213:0.541162,0.403616,0.0553774	0/0:59:1.0:8,8:8-8,8-8:24,21,0,12:8,24:3,6|4,1|5,2|6,2|7,1:372.745:326.675,113.385:0.0990099,0.0990099:0.0,5.46256e-07,1.0
-chr1	6023295	.	TTATTTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTAT	.	.	END=6023322;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999751:5,5:5-5,5-5:16,14,0,2:5,16:4,2:209.297:366.612,131.36:0.0,0.0:0.999948,5.54584e-05,1.1957e-41	0/0:28:0.995703:7,7:7-7,7-7:11,11,0,6:7,11:2,2|3,2|5,1|6,1:183.374:326.675,113.385:0.0,0.0:5.7497e-34,0.00238712,0.997618
-chr1	6023967	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=6023984;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.98759:3,3:3-3,3-3:10,12,0,0:3,10:NULL:152.337:366.612,131.36:0.0,0.0:3.97564e-34,0.00838731,0.99163	0/0:36:0.999955:3,3:3-3,3-3:18,18,0,0:3,18:NULL:235.55:326.675,113.385:0.0,0.0:0.0,5.44966e-05,0.999948
-chr1	6025872	.	TTTATTTATTTATTTATTTATTTATTTA	TTTATTTATTTATTTATTTATTTA	.	.	END=6025899;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.975625:6,6:5-6,5-6:10,14,0,3:6,10:2,1|3,1|5,1:200.967:366.612,131.36:0.442564,0.442564:0.993257,0.00675705,8.68775e-18	0/0:15:0.961678:7,7:7-7,7-7:8,5,0,2:7,8:3,1|6,1:92.9615:326.675,113.385:0.0,0.0:1.86636e-19,0.0193302,0.980711
-chr1	6025930	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6025961;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:15:0.0335167:23,23:23-26,23-26:0,13,0,0:NULL:NULL:131.818:366.612,131.36:0.917112,0.917112:0.0,0.0,1.0	1/0:16:0.66936:15,16:15-17,16-16:10,1,0,4:15,3|16,7:5,1|11,1|13,1|14,1:90.1498:326.675,113.385:0.59653,0.139319:1.76427e-06,0.672544,0.327468
-chr1	6033005	.	TAAATAAATAAA	.	.	.	END=6033016;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:23,12,0,3:3,23:2,3:225.16:366.612,131.36:0.0,0.0:0.0,6.25145e-07,1.0	0/0:23:0.999932:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.95:326.675,113.385:0.0,0.0:0.0,3.9076e-05,0.999963
-chr1	6033244	.	ATACATACATACATACATACATACATACATACATAC	ATACATACATACATACATACATAC,ATACATACATACATACATACATACATAC	.	.	END=6033279;RU=atac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.902238:6,7:6-7,7-7:8,20,0,5:6,2|7,6:2,1|3,2|5,2:264.045:366.612,131.36:0.478946,0.0990099:0.999545,0.000455991,4.64201e-20	0/0:18:0.906221:9,9:9-9,9-9:7,8,0,3:9,7:3,1|4,1|7,1:124.6:326.675,113.385:0.29703,0.29703:3.74206e-17,0.0603248,0.939766
-chr1	6033357	.	ATATATATATATATAT	.	.	.	END=6033372;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999213:8,8:8-8,8-8:14,15,0,0:8,14:NULL:202.918:366.612,131.36:0.0,0.0:7.41025e-23,0.000450359,0.999552	0/0:14:0.987169:8,8:8-8,8-8:10,4,0,0:8,10:NULL:77.138:326.675,113.385:0.0,0.0:2.36841e-16,0.00686831,0.99315
-chr1	6034894	.	GGCAGGCAGGCAGGCA	.	.	.	END=6034909;RU=ggca;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.990581:4,4:4-4,4-4:11,20,0,0:4,11:NULL:229.918:366.612,131.36:0.0,0.0:5.80723e-36,0.00742497,0.992595	0/0:19:0.967518:4,4:4-4,4-4:8,9,0,2:4,8:3,2:131.181:326.675,113.385:0.0,0.0:2.16302e-26,0.0180274,0.98201
-chr1	6041090	.	AAAATAAAATAAAAT	.	.	.	END=6041104;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999995:3,3:3-3,3-3:20,23,0,0:3,20:NULL:296.664:366.612,131.36:0.0,0.0:0.0,1.48067e-05,0.999987	0/0:52:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:317.917:326.675,113.385:0.0,0.0:0.0,1.53151e-08,1.0
-chr1	6041134	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6041161;RU=tgtt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999963:7,7:5-7,5-7:18,17,0,5:7,18:3,1|5,3|6,1:268.322:366.612,131.36:0.597351,0.597351:0.0,3.16593e-05,0.999971	0/0:53:1.0:7,7:7-7,7-7:28,16,0,8:7,28:2,2|3,3|5,1|6,2:317.829:326.675,113.385:0.278639,0.278639:0.0,3.35055e-08,1.0
-chr1	6041922	.	TTGGTTTGGTTTGGTTTGGT	TTGGTTTGGTTTGGTTTGGTTTGGT	.	.	END=6041941;RU=ttggt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999293:5,5:3-5,3-5:13,22,0,6:5,13:2,1|4,4|5,1:295.978:366.612,131.36:0.863148,0.863148:0.0,6.90972e-05,0.999933	0/0:34:1.0:4,4:4-4,4-4:19,10,0,5:4,19:2,4|3,1:200.289:326.675,113.385:0.0,0.0:0.0,7.07621e-06,0.999994
-chr1	6041960	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=6041977;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999493:3,3:3-3,3-3:14,20,0,0:3,14:NULL:236.201:366.612,131.36:0.0,0.0:0.0,0.000392877,0.999607	0/0:27:1.0:3,3:3-3,3-3:23,4,0,0:3,23:NULL:128.968:326.675,113.385:0.0,0.0:0.0,5.73006e-07,1.0
-chr1	6042004	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	.	END=6042038;RU=tttgt;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.161982:7,7:4-7,4-7:2,15,0,0:7,2:NULL:150.298:366.612,131.36:1.38953,1.38953:8.51861e-07,0.69187,0.308144	0/0:34:1.0:7,7:7-7,7-7:19,8,0,7:7,19:2,1|3,1|4,2|5,1|6,1|7,1:201.051:326.675,113.385:0.0,0.0:0.0,4.35751e-06,0.999995
-chr1	6048614	.	AAACAAACAAAC	.	.	.	END=6048625;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:38,7,0,2:3,38:2,2:231.003:366.612,131.36:0.0,0.0:0.0,1.21015e-11,1.0	0/0:27:0.999983:3,3:3-3,3-3:18,9,0,0:3,18:NULL:154.817:326.675,113.385:0.0,0.0:0.0,2.35957e-05,0.999979
-chr1	6051144	.	GTTTGTTTGTTTGTTTGTTTGTTTGTTT	GTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	.	.	END=6051171;RU=gttt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.978832:9,9:9-9,9-9:9,9,0,2:9,9:2,1|8,1:134.067:366.612,131.36:0.0,0.0:7e-45,0.00358442,0.996428	0/0:40:1.0:7,7:7-8,7-8:26,7,0,6:7,26:4,1|6,5:217.953:326.675,113.385:0.21692,0.21692:0.0,3.26809e-08,1.0
-chr1	6056382	.	CCTCCTCCTCCTCCT	.	.	.	END=6056396;RU=cct;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.998765:5,5:5-5,5-5:13,23,0,0:5,13:NULL:259.972:366.612,131.36:0.0,0.0:3.85917e-38,0.00100599,0.998998	0/0:27:0.98372:5,5:5-5,5-5:10,17,0,0:5,10:NULL:192.524:326.675,113.385:0.0,0.0:3.52835e-29,0.0132492,0.986779
-chr1	6056414	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=6056441;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.990886:7,7:7-7,7-7:10,17,0,2:7,10:5,2:214.125:366.612,131.36:0.0,0.0:6.78826e-30,0.00684723,0.993167	0/0:38:0.997307:7,7:7-7,7-7:11,14,0,13:7,11:3,3|4,1|5,3|6,6:268.22:326.675,113.385:0.0,0.0:5.31752e-33,0.00134459,0.998662
-chr1	6059464	.	AAAAACAAAAACAAAAAC	.	.	.	END=6059481;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:58:1.0:3,3:3-3,3-3:33,25,0,0:3,33:NULL:365.524:366.612,131.36:0.0,0.0:0.0,3.01269e-09,1.0	0/0:44:1.0:3,3:3-3,3-3:28,16,0,0:3,28:NULL:260.005:326.675,113.385:0.0,0.0:0.0,5.9262e-08,1.0
-chr1	6059973	.	AAATAAATAAAT	.	.	.	END=6059984;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:23,21,0,2:3,23:2,2:303.124:366.612,131.36:0.0,0.0:0.0,3.97391e-07,1.0	0/0:24:0.999999:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.651:326.675,113.385:0.0,0.0:0.0,1.0502e-05,0.999993
-chr1	6061243	.	AGAGAGAGAGAG	AGAGAGAG	.	.	END=6061254;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:1.0:4,4:4-4,4-4:20,0,0,0:4,20:NULL:77.6389:366.612,131.36:0.0,0.0:1.0,3.85916e-06,0.0	0/0:44:1.0:6,6:4-6,4-6:26,14,0,3:6,26:5,3:249.986:326.675,113.385:0.339533,0.339533:0.0,6.44112e-08,1.0
-chr1	6062647	.	GTGGGTGGGTGG	.	.	.	END=6062658;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:19,28,0,2:3,19:2,2:337.593:366.612,131.36:0.0,0.0:0.0,6.14054e-06,0.999995	0/0:35:0.997682:3,3:3-3,3-3:12,23,0,0:3,12:NULL:249.551:326.675,113.385:0.0,0.0:5.23451e-40,0.00149923,0.998505
-chr1	6062751	.	TAAATAAATAAA	.	.	.	END=6062762;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999991:3,3:3-3,3-3:18,10,0,0:3,18:NULL:161.93:366.612,131.36:0.0,0.0:0.0,1.2184e-05,0.999987	0/0:16:0.997745:3,3:3-3,3-3:12,4,0,0:3,12:NULL:82.2321:326.675,113.385:0.0,0.0:9.1662e-41,0.00103777,0.998967
-chr1	6066036	.	CTCTGTCTCTGTCTCTGT	CTCTGTCTCTGT	.	.	END=6066053;RU=ctctgt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.99997:2,2:2-2,2-2:17,12,0,0:2,17:NULL:176.013:366.612,131.36:0.0,0.0:0.999979,2.31339e-05,5.9961e-40	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.554:326.675,113.385:0.0,0.0:0.0,2.05396e-07,1.0
-chr1	6072915	.	AATAATAATAATAATAATAATAATAATAATAATAATAAT	AATAATAATAATAATAATAATAATAAT,AATAATAATAATAATAATAATAATAATAAT	.	.	END=6072953;RU=aat;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:4:0.0671286:9,10:5-11,5-11:0,2,0,2:NULL:8,2:35.2296:366.612,131.36:1.43267,1.53245:1.0,0.0,0.0	0/0:24:0.930029:13,13:12-14,12-14:8,9,0,5:13,8:4,1|5,1|6,2|7,1:152.319:326.675,113.385:0.53502,0.53502:5.64677e-12,0.0433137,0.956757
-chr1	6077184	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6077227;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.892419:24,25:20-24,20-25:7,13,0,0:24,5|25,2:NULL:158.487:366.612,131.36:1.70567,2.21109:5.40504e-17,0.00942569,0.990596	0/0:21:0.755053:22,22:18-22,18-22:6,5,0,8:22,6:6,1|14,2|15,1|17,2|18,1|21,1:133.559:326.675,113.385:1.92222,1.92222:5.48777e-09,0.0867559,0.913343
-chr1	6080857	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=6080876;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999992:4,4:4-4,4-4:18,14,0,3:4,18:2,1|3,2:220.417:366.612,131.36:0.0,0.0:0.999987,1.36199e-05,1.52107e-38	0/0:21:0.976075:5,5:5-5,5-5:8,5,0,8:5,8:2,1|3,2|4,5:135.037:326.675,113.385:0.0,0.0:7.29175e-27,0.00865998,0.991359
-chr1	6083873	.	AATAAATAAATA	AATAAATA	.	.	END=6083884;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:32:0.774856:2,3:2-2,2-3:20,10,0,2:2,18|3,2:2,2:202.804:366.612,131.36:0.0,0.497026:0.225216,0.774819,1.263e-42	0/0:28:0.994711:3,3:3-3,3-3:10,16,0,2:3,10:2,1|3,1:207.602:326.675,113.385:0.0,0.0:3.33485e-40,0.00209673,0.997912
-chr1	6084220	.	ATTTATTTATTT	ATTT	.	.	END=6084231;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.138181:1,1:1-1,1-1:0,15,0,0:NULL:NULL:149.469:366.612,131.36:0.0,0.0:0.260032,0.543367,0.196608	0/0:19:0.998322:3,3:3-3,3-3:13,6,0,0:3,13:NULL:109.814:326.675,113.385:0.0,0.0:1.01883e-32,0.000871197,0.999134
-chr1	6085465	.	TAATAATAATAATAA	TAATAATAATAA	.	.	END=6085479;RU=taa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.98907:4,4:4-4,4-4:10,6,0,0:4,10:NULL:93.322:366.612,131.36:0.0,0.0:0.995439,0.00457339,2.73967e-23	0/0:18:0.996344:5,5:5-5,5-5:12,6,0,0:5,12:NULL:103.466:326.675,113.385:0.0,0.0:8.40892e-32,0.00230582,0.997701
-chr1	6085756	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6085801;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.750683:17,17:16-17,16-17:8,12,0,5:16,2|17,6:7,1|14,2|16,1|17,1:195.426:366.612,131.36:0.35561,0.35561:1.0,0.0,0.0	0/0:29:0.811173:23,23:23-23,23-23:6,13,0,10:23,6:5,1|8,2|10,1|11,2|14,1|19,1|22,2:226.27:326.675,113.385:0.0,0.0:6.11263e-08,0.0622423,0.937851
-chr1	6086268	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6086299;RU=tc;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0130102:23,23:1-23,1-23:0,5,0,2:NULL:15,1|21,1:63.6069:366.612,131.36:8.93866,8.93866:1.83284e-08,0.60832,0.391743	0/0:17:0.86262:16,16:16-16,16-16:6,6,0,5:16,6:4,1|5,1|14,1|15,1|16,1:123.14:326.675,113.385:0.0,0.0:4.58227e-17,0.0297807,0.970274
-chr1	6087008	.	TATTTATTTATT	.	.	.	END=6087019;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998042:3,3:3-3,3-3:12,9,0,0:3,12:NULL:131.045:366.612,131.36:0.0,0.0:2.22887e-39,0.00113631,0.998868	0/0:18:0.999661:3,3:3-3,3-3:15,3,0,0:3,15:NULL:85.7931:326.675,113.385:0.0,0.0:0.0,0.000154233,0.999849
-chr1	6092499	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6092524;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.997822:16,16:15-16,15-16:18,14,0,3:15,2|16,16:7,1|9,1|11,1:246.975:366.612,131.36:0.258566,0.258566:0.0,2.54159e-05,0.999978	0/0:34:0.999858:13,13:13-13,13-13:17,10,0,6:13,17:6,1|7,1|10,2|11,1|13,1:210.266:326.675,113.385:0.19802,0.19802:4.57521e-30,4.70373e-05,0.999955
-chr1	6093013	.	CACACACACACACA	.	.	.	END=6093026;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.396531:7,7:5-7,5-7:3,10,0,0:7,3:NULL:100.647:366.612,131.36:0.404368,0.404368:7.27447e-05,0.406649,0.593349	0/0:14:0.421024:7,7:5-7,5-7:3,9,0,2:7,3:5,2:109.583:326.675,113.385:0.575281,0.575281:6.83108e-05,0.324228,0.675718
-chr1	6098593	.	CTAGAACTAGAACTAGAA	.	.	.	END=6098610;RU=ctagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999992:3,3:3-3,3-3:18,11,0,0:3,18:NULL:172.134:366.612,131.36:0.0,0.0:0.0,1.78548e-05,0.999986	0/0:25:0.999799:3,3:3-3,3-3:15,8,0,2:3,15:2,2:146.151:326.675,113.385:0.0,0.0:0.0,9.13691e-05,0.99991
-chr1	6099223	.	TTGGTTGGTTGG	.	.	.	END=6099234;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.623441:3,3:3-3,3-3:4,2,0,0:3,4:NULL:32.203:366.612,131.36:0.0,0.0:1.71507e-13,0.160163,0.839912	0/0:31:0.999602:3,3:1-3,1-3:15,15,0,0:3,15:NULL:196.668:326.675,113.385:0.913899,0.913899:0.0,0.000276285,0.999727
-chr1	6099488	.	CCCACCCACCCA	.	.	.	END=6099499;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:182.584:366.612,131.36:0.0,0.0:0.0,1.09776e-06,1.0	0/0:31:0.999984:3,3:3-3,3-3:18,13,0,0:3,18:NULL:188.538:326.675,113.385:0.0,0.0:0.0,2.42689e-05,0.999978
-chr1	6099665	.	TTGTTTGTTTGTTTGTTTGTTTGT	TTGTTTGTTTGTTTGTTTGTTTGTTTGT	.	.	END=6099688;RU=ttgt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0649898:7,7:4-7,4-7:0,15,0,5:NULL:4,3|5,1|6,1:172.593:366.612,131.36:0.866209,0.866209:8.74432e-09,0.541024,0.459089	0/0:44:1.0:6,6:6-6,6-6:23,16,0,5:6,23:2,1|3,2|4,1|5,1:276.875:326.675,113.385:0.0,0.0:0.0,1.05494e-06,1.0
-chr1	6102505	.	CAACAACAACAA	.	.	.	END=6102516;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999901:4,4:4-4,4-4:17,12,0,0:4,17:NULL:173.782:366.612,131.36:0.0,0.0:0.0,7.15075e-05,0.999932	0/0:36:0.999977:4,4:4-4,4-4:18,18,0,0:4,18:NULL:228.586:326.675,113.385:0.0,0.0:0.0,3.11281e-05,0.999971
-chr1	6107421	.	AAATAAATAAAT	.	.	.	END=6107432;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:130.232:366.612,131.36:0.0,0.0:0.0,5.2435e-06,0.999995	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.826:326.675,113.385:0.0,0.0:0.0,4.03319e-06,0.999995
-chr1	6108219	.	CACACACACACACACACACACACACACACACACACACA	CA	.	.	END=6108256;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:61:0.993249:19,19:19-20,19-20:25,18,0,18:17,2|19,20|20,3:4,2|5,3|7,1|8,1|9,1|10,1|11,3|13,1|14,2|15,2|18,1:429.764:326.675,113.385:0.29703,0.29703:1.847e-21,6.9518e-05,0.999933
-chr1	6108461	.	AGAGAGAGAGAGAGAG	AG	.	.	END=6108476;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.99941:8,8:8-8,8-8:15,10,0,0:8,15:NULL:150.292:326.675,113.385:0.139319,0.139319:3.98759e-33,0.000372694,0.999629
-chr1	6109390	.	CACCCACCCACC	CACCCACCCACCCACC	.	.	END=6109401;RU=cacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:21:0.0564412:3,4:2-6,2-6:0,21,0,0:NULL:NULL:186.57:366.612,131.36:0.979147,0.985832:0.0502075,0.369433,0.580497	0/0:38:1.0:3,3:2-3,2-3:24,13,0,0:3,24:NULL:212.488:326.675,113.385:0.298675,0.298675:0.0,4.71475e-07,1.0
-chr1	6109799	.	AAATAAATAAAT	AAATAAAT	.	.	END=6109810;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0229253:2,2:1-4,1-4:0,8,0,0:NULL:NULL:79.1816:366.612,131.36:0.723518,0.723518:0.0860922,0.471438,0.442637	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:200.156:326.675,113.385:0.0,0.0:0.0,1.66408e-07,1.0
-chr1	6109840	.	CAACAACAACAA	CAACAA	.	.	END=6109851;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0171646:2,2:1-3,1-3:0,10,0,0:NULL:NULL:95.4701:366.612,131.36:0.673267,0.673267:0.125553,0.493881,0.380755	0/0:28:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:156.084:326.675,113.385:0.0,0.0:0.0,7.19318e-06,0.999994
-chr1	6110101	.	AAATAAATAAAT	AAAT	.	.	END=6110112;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.114961:1,1:1-3,1-3:0,29,0,0:NULL:NULL:273.872:366.612,131.36:0.984041,0.984041:0.305634,0.506291,0.188084	0/0:19:0.999394:3,3:3-3,3-3:14,5,0,0:3,14:NULL:97.881:326.675,113.385:0.0,0.0:8.52e-43,0.000282072,0.99972
-chr1	6114158	.	AATAAATAAATA	.	.	.	END=6114169;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.808815:3,3:3-3,3-3:5,8,0,0:3,5:NULL:94.8619:366.612,131.36:0.0,0.0:1.67371e-12,0.0870317,0.913069	0/0:12:0.767742:3,3:3-3,3-3:5,7,0,0:3,5:NULL:81.3956:326.675,113.385:0.0,0.0:3.77461e-12,0.127857,0.872242
-chr1	6118166	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6118197;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999744:24,24:22-24,22-24:16,10,0,15:24,16:6,2|7,2|8,1|9,1|12,1|14,1|17,2|19,1|20,1|21,1|23,1|24,1:287.608:366.612,131.36:0.507951,0.507951:0.0,0.0,1.0	0/0:32:0.98645:16,16:16-17,16-17:10,9,0,12:16,10:5,1|6,2|9,1|10,3|12,1|13,1|14,3:227.308:326.675,113.385:0.345543,0.345543:5.24999e-15,0.00639446,0.993618
-chr1	6118512	.	TTCAATTCAATTCAATTCAA	TTCAATTCAATTCAATTCAATTCAA	.	.	END=6118531;RU=ttcaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999993:5,5:5-5,5-5:19,13,0,5:5,19:3,1|4,4:231.825:366.612,131.36:0.0,0.0:0.0,1.00077e-06,1.0	0/0:31:0.99998:4,4:4-4,4-4:18,9,0,4:4,18:3,4:184.02:326.675,113.385:0.0,0.0:0.0,1.38592e-05,0.999987
-chr1	6122082	.	AAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=6122096;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.994947:5,5:5-5,5-5:11,13,0,0:5,11:NULL:162.863:366.612,131.36:0.0,0.0:0.0,0.00154822,0.998458	0/0:33:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:207.671:326.675,113.385:0.0,0.0:0.0,1.27218e-05,0.999987
-chr1	6124347	.	TAAATAAATAAATAAATAAA	TAAA,TAAATAAA	.	.	END=6124366;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0780755:1,2:1-5,1-5:0,20,0,0:NULL:NULL:195.895:366.612,131.36:1.2691,1.27057:0.497749,0.429319,0.072985	0/0:27:1.00001:5,5:5-5,5-5:22,5,0,0:5,22:NULL:138.504:326.675,113.385:0.0,0.0:0.0,1.54925e-06,1.0
-chr1	6126323	.	AATCAATCAATCAATCAATCAATCAATCAATC	AATCAATCAATCAATCAATCAATC	.	.	END=6126354;RU=aatc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.997795:6,6:6-6,6-6:13,14,0,3:6,13:3,3:197.893:366.612,131.36:0.0,0.0:0.999574,0.00043049,1.30887e-36	0/0:25:0.999059:8,8:8-8,8-8:13,5,0,7:8,13:2,1|4,1|5,1|6,2|7,2:152.492:326.675,113.385:0.0,0.0:1.43201e-31,0.000422655,0.999582
-chr1	6130083	.	AAATCAAATCAAATC	.	.	.	END=6130097;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.998496:3,3:3-3,3-3:13,18,0,0:3,13:NULL:224.981:366.612,131.36:0.0,0.0:7.4e-44,0.00115319,0.998853	0/0:23:0.999472:3,3:3-3,3-3:14,9,0,0:3,14:NULL:144.783:326.675,113.385:0.0,0.0:0.0,0.000341248,0.99966
-chr1	6131636	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	.	END=6131675;RU=atag;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:10:0.704011:10,10:10-10,10-10:5,5,0,0:10,5:NULL:66.1764:366.612,131.36:0.29703,0.29703:3.54997e-12,0.179667,0.820398	0/0:25:0.984166:10,10:10-10,10-10:9,8,0,8:10,9:2,1|4,1|5,1|7,1|8,1|9,3:173.745:326.675,113.385:0.0,0.0:5.2531e-22,0.00554703,0.994467
-chr1	6132801	.	TTGGTTGGTTGGTTGG	.	.	.	END=6132816;RU=ttgg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.948458:4,4:4-4,4-4:8,16,0,0:4,8:NULL:178.262:366.612,131.36:0.0,0.0:5.35741e-27,0.0393248,0.960742	0/0:37:0.999998:4,4:4-4,4-4:18,14,0,5:4,18:2,1|3,4:230.985:326.675,113.385:0.0,0.0:0.0,1.08062e-05,0.999993
-chr1	6133624	.	AAATAAATAAAT	.	.	.	END=6133635;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.962477:3,3:3-3,3-3:8,10,0,0:3,8:NULL:121.6:366.612,131.36:0.0,0.0:2.95185e-25,0.0196238,0.980413	0/0:16:0.994882:3,3:3-3,3-3:11,5,0,0:3,11:NULL:92.3692:326.675,113.385:0.0,0.0:1.38372e-34,0.002219,0.99779
-chr1	6134579	.	AAATAAAATAAAATA	.	.	.	END=6134593;RU=aaata;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.993759:3,3:3-3,3-3:11,14,0,0:3,11:NULL:174.422:366.612,131.36:0.0,0.0:1.87619e-36,0.00370717,0.996301	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:177.07:326.675,113.385:0.0,0.0:0.0,4.22136e-06,0.999995
-chr1	6134731	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6134782;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0170447:23,23:1-24,1-24:0,13,0,6:NULL:7,2|12,2|19,1|23,1:173.358:366.612,131.36:7.47154,7.47154:0.845741,0.152508,0.0018332	0/0:33:0.429794:26,26:25-26,25-26:6,18,0,9:25,2|26,4:5,1|6,1|7,1|11,1|12,1|15,1|21,1|26,2:270.245:326.675,113.385:0.472558,0.472558:8.09277e-19,0.522431,0.47766
-chr1	6136631	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6136660;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.482195:20,20:16-20,16-20:4,14,0,0:20,4:NULL:151.317:366.612,131.36:0.913899,0.913899:0.0,0.0,1.0	0/0:48:0.636075:15,15:14-16,14-16:25,16,0,7:13,2|14,6|15,14|16,3:5,1|6,1|8,1|11,1|14,3:338.333:326.675,113.385:0.673122,0.673122:3.52494e-13,0.351759,0.648281
-chr1	6137129	.	TATTATTATTAT	.	.	.	END=6137140;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:26,12,0,0:4,26:NULL:216.068:366.612,131.36:0.0,0.0:0.0,1.37565e-07,1.0	0/0:22:0.999578:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.607:326.675,113.385:0.0,0.0:1.757e-41,0.000238084,0.999765
-chr1	6137380	.	TTGTTTGTTTGT	TTGT	.	.	END=6137391;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.138668:1,1:1-2,1-2:0,23,0,0:NULL:NULL:210.404:366.612,131.36:0.323567,0.323567:0.373728,0.491082,0.135269	0/0:37:1.0:3,3:3-3,3-3:29,8,0,0:3,29:NULL:183.108:326.675,113.385:0.0,0.0:0.0,8.06194e-09,1.0
-chr1	6137986	.	TGCATGCATGCA	.	.	.	END=6137997;RU=tgca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:281.014:366.612,131.36:0.0,0.0:0.0,3.39933e-07,1.0	0/0:18:0.994469:3,3:3-3,3-3:11,7,0,0:3,11:NULL:116.139:326.675,113.385:0.0,0.0:7.27824e-38,0.00322665,0.996784
-chr1	6142183	.	AAACAAACAAACAAAC	AAACAAACAAAC	.	.	END=6142198;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.968282:3,3:3-3,3-3:8,12,0,0:3,8:NULL:141.244:366.612,131.36:0.0,0.0:0.98703,0.0129976,3.1702e-24	0/0:42:1.00001:4,4:4-4,4-4:23,17,0,2:4,23:3,2:263.53:326.675,113.385:0.0,0.0:0.0,9.19229e-07,1.0
-chr1	6144901	.	GAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA	.	.	END=6144922;RU=ga;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.983341:8,8:7-8,7-8:10,0,0,0:8,10:NULL:40.7144:366.612,131.36:0.236383,0.236383:0.997944,0.00205975,2.92473e-22	0/0:43:0.999973:11,11:11-11,11-11:25,13,0,4:10,2|11,23:6,1|7,1|10,2:261.614:326.675,113.385:0.0,0.0:1.5765e-36,3.36838e-05,0.99997
-chr1	6153283	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=6153306;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.965536:6,6:6-6,6-6:9,15,0,0:6,9:NULL:174.808:366.612,131.36:0.0,0.0:2.75578e-29,0.0260199,0.974032	0/0:25:0.999981:6,6:6-6,6-6:18,5,0,2:6,18:4,1|5,1:133.222:326.675,113.385:0.0,0.0:0.0,1.21902e-05,0.999987
-chr1	6153696	.	AACTAACTAACT	.	.	.	END=6153707;RU=aact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999994:3,3:3-3,3-3:19,11,0,0:3,19:NULL:177.198:366.612,131.36:0.0,0.0:0.0,1.20556e-05,0.999987	0/0:14:0.989695:3,3:3-3,3-3:10,4,0,0:3,10:NULL:76.5681:326.675,113.385:0.0,0.0:1.32747e-32,0.00489523,0.995116
-chr1	6156105	.	GGTGGTGGTGGT	.	.	.	END=6156116;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999945:4,4:4-4,4-4:18,13,0,0:4,18:NULL:194.984:366.612,131.36:0.0,0.0:0.0,3.71032e-05,0.999964	0/0:43:1.0:4,4:4-4,4-4:28,15,0,0:4,28:NULL:245.438:326.675,113.385:0.0,0.0:0.0,4.38061e-08,1.0
-chr1	6156235	.	AAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=6156254;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999629:6,6:6-6,6-6:14,23,0,4:6,14:2,1|3,1|4,1|5,1:299.189:366.612,131.36:0.0,0.0:0.0,0.00013068,0.999872	0/0:27:0.947843:5,5:5-5,5-5:9,18,0,0:5,9:NULL:205.243:326.675,113.385:0.0,0.0:1.78488e-25,0.0429236,0.957147
-chr1	6157851	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6157890;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.620061:24,25:24-24,24-25:7,8,0,6:24,7:4,1|6,1|9,1|13,1|21,1|25,1:166.354:366.612,131.36:0.0,0.525965:0.0,0.0,1.0	0/0:27:0.752279:20,20:17-20,17-20:12,9,0,5:17,2|20,10:4,1|10,1|11,1|17,1|20,1:183.179:326.675,113.385:1.30783,1.30783:1.61306e-21,0.24328,0.756734
-chr1	6158692	.	AGCAGCAGCAGC	.	.	.	END=6158703;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:30,19,0,0:4,30:NULL:296.539:366.612,131.36:0.0,0.0:0.0,1.30628e-08,1.0	0/0:45:1.0:4,4:4-4,4-4:26,19,0,0:4,26:NULL:279.647:326.675,113.385:0.0,0.0:0.0,1.50567e-07,1.0
-chr1	6158961	.	GTGGTGGTGGTG	.	.	.	END=6158972;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:31,17,0,0:4,31:NULL:274.702:366.612,131.36:0.0,0.0:0.0,4.15691e-09,1.0	0/0:53:1.0:4,4:4-4,4-4:30,21,0,2:4,30:3,2:321.545:326.675,113.385:0.0,0.0:0.0,4.70615e-09,1.0
-chr1	6160096	.	TACATACATACA	.	.	.	END=6160107;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:22,17,0,2:3,22:2,2:257.513:366.612,131.36:0.0,0.0:0.0,1.07318e-06,1.0	0/0:40:1.0:3,3:3-3,3-3:25,13,0,2:3,25:2,2:231.279:326.675,113.385:0.0,0.0:0.0,9.43314e-08,1.0
-chr1	6160598	.	AATAAATAAATA	.	.	.	END=6160609;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999995:3,3:2-3,2-3:19,21,0,0:3,19:NULL:274.628:366.612,131.36:0.323567,0.323567:0.0,1.31913e-05,0.999987	0/0:39:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:225.602:326.675,113.385:0.0,0.0:0.0,3.47456e-07,1.0
-chr1	6162049	.	CCACCACCACCA	.	.	.	END=6162060;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:10:0.988354:4,4:4-4,4-4:10,0,0,0:4,10:NULL:39.0933:366.612,131.36:0.0,0.0:3.00169e-25,0.00586113,0.994152	0/0:31:1.0:4,4:4-4,4-4:20,11,0,0:4,20:NULL:177.09:326.675,113.385:0.0,0.0:0.0,7.64484e-06,0.999994
-chr1	6163104	.	TTTGTTTGTTTG	.	.	.	END=6163115;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:220.902:366.612,131.36:0.0,0.0:0.0,8.27155e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:262.632:326.675,113.385:0.0,0.0:0.0,2.08384e-07,1.0
-chr1	6178405	.	ATAAAATAAAATAAA	.	.	.	END=6178419;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-4,3-4:21,15,0,0:3,21:NULL:219.077:366.612,131.36:0.236383,0.236383:0.0,3.03743e-06,1.0	0/0:39:1.0:3,3:3-3,3-3:24,15,0,0:3,24:NULL:229.543:326.675,113.385:0.0,0.0:0.0,4.18841e-07,1.0
-chr1	6178663	.	GACCTGACCTGACCT	.	.	.	END=6178677;RU=gacct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:28,32,0,0:3,28:NULL:404.545:366.612,131.36:0.0,0.0:0.0,2.97062e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:25,6,0,3:3,25:2,3:175.922:326.675,113.385:0.0,0.0:0.0,1.12569e-07,1.0
-chr1	6180765	.	TAAATAAATAAA	.	.	.	END=6180776;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999829:3,3:3-3,3-3:15,17,0,0:3,15:NULL:211.521:366.612,131.36:0.0,0.0:0.0,0.000125374,0.999879	0/0:14:0.936818:3,3:3-3,3-3:7,5,0,2:3,7:2,2:84.2429:326.675,113.385:0.0,0.0:5.72889e-23,0.0212536,0.978789
-chr1	6188010	.	TTTAATTTAATTTAA	.	.	.	END=6188024;RU=tttaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.838321:3,3:3-3,3-3:6,15,0,0:3,6:NULL:164.825:366.612,131.36:0.0,0.0:1.6313e-19,0.108224,0.891874	0/0:22:0.999711:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.999:326.675,113.385:0.0,0.0:0.0,0.000179156,0.999825
-chr1	6190661	.	AAATAAATAAAT	.	.	.	END=6190672;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:3,3:3-3,3-3:21,17,0,0:3,21:NULL:238.529:366.612,131.36:0.0,0.0:0.0,3.31534e-06,1.0	0/0:34:0.999996:3,3:3-3,3-3:19,15,0,0:3,19:NULL:211.052:326.675,113.385:0.0,0.0:0.0,1.27372e-05,0.999987
-chr1	6191823	.	AACAAACAAACA	.	.	.	END=6191834;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.00001:3,3:3-3,3-3:22,24,0,4:3,22:2,4:329.783:366.612,131.36:0.0,0.0:0.0,5.95576e-07,1.0	0/0:31:0.999944:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.552:326.675,113.385:0.0,0.0:0.0,3.98189e-05,0.999963
-chr1	6193268	.	CAACAACAACAACAA	.	.	.	END=6193282;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:5,5:5-5,5-5:26,23,0,0:5,26:NULL:318.943:366.612,131.36:0.0990099,0.0990099:0.0,2.14392e-07,1.0	0/0:34:0.999998:5,5:5-5,5-5:18,13,0,3:5,18:4,3:208.346:326.675,113.385:0.0,0.0:0.0,1.1307e-05,0.999993
-chr1	6194222	.	AACAAAAACAAAAACAAAAACAAA	AACAAAAACAAAAACAAA	.	.	END=6194245;RU=aacaaa;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:217.53:366.612,131.36:0.0,0.0:1.0,2.13012e-06,0.0	0/0:40:1.0:4,4:3-4,3-4:24,8,0,7:4,24:2,1|3,6:217.741:326.675,113.385:0.253975,0.253975:0.0,1.443e-07,1.0
-chr1	6196714	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6196751;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.596831:21,22:20-21,20-22:14,10,0,18:20,4|21,7|22,3:5,1|6,2|8,2|9,1|10,1|11,4|12,1|15,4|16,1|19,1:308.486:366.612,131.36:0.374147,0.769225:3.65542e-38,7.91182e-05,0.999925	0/0:19:0.816281:19,19:18-19,18-19:9,5,0,5:18,2|19,7:6,2|15,2|17,1:128.555:326.675,113.385:0.311527,0.311527:3.19036e-07,0.158704,0.84137
-chr1	6197125	.	GTTTGTTTGTTTGTTT	GTTTGTTTGTTT	.	.	END=6197140;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:3,3:3-3,3-3:29,25,0,0:3,29:NULL:343.468:366.612,131.36:0.0,0.0:1.0,5.40311e-09,0.0	0/0:40:1.0:4,4:4-4,4-4:20,14,0,6:4,20:2,1|3,5:244.8:326.675,113.385:0.0,0.0:2.10572e-29,4.70157e-06,0.999995
-chr1	6197608	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6197647;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.0197949:34,34:15-37,15-37:0,12,0,11:NULL:9,1|12,1|13,2|15,2|19,1|28,1|29,1|30,1|34,1:197.621:366.612,131.36:6.74231,6.74231:3.45815e-30,0.143738,0.856344	0/0:48:0.965823:20,20:19-20,19-20:13,18,0,17:19,2|20,11:5,3|9,2|10,2|11,2|12,1|15,1|16,1|18,3|19,2:365.533:326.675,113.385:0.236383,0.236383:1.13737e-10,0.0318096,0.968249
-chr1	6197805	.	CTGCCTCTGCCTCTGCCT	CTGCCTCTGCCT	.	.	END=6197822;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:1.0:2,2:2-2,2-2:44,2,0,0:2,44:NULL:191.074:366.612,131.36:0.0,0.0:1.0,2.87214e-13,0.0	0/0:57:1.0:3,3:3-3,3-3:39,18,0,0:3,39:NULL:320.576:326.675,113.385:0.0,0.0:0.0,1.62659e-11,1.0
-chr1	6198434	.	CACACACACACACA	.	.	.	END=6198447;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.997258:7,7:6-7,6-7:13,15,0,0:7,13:NULL:190.885:366.612,131.36:0.236383,0.236383:5.4547e-24,0.0019861,0.998019	0/0:30:1.0:7,7:7-7,7-7:25,5,0,0:7,25:NULL:144.648:326.675,113.385:0.0,0.0:3e-45,2.28277e-07,1.0
-chr1	6199733	.	TTATTTATTTAT	.	.	.	END=6199744;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.99552:3,3:3-3,3-3:12,24,0,0:3,12:NULL:279.333:366.612,131.36:0.0,0.0:1.2305e-39,0.00393815,0.996073	0/0:42:1.0:3,3:3-3,3-3:22,17,0,3:3,22:2,3:268.516:326.675,113.385:0.0,0.0:0.0,8.0634e-07,1.0
-chr1	6203219	.	AAACAAACAAAC	.	.	.	END=6203230;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999833:3,3:3-3,3-3:16,24,0,0:3,16:NULL:278.446:366.612,131.36:0.0,0.0:0.0,0.000147499,0.999856	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:183.432:326.675,113.385:0.0,0.0:0.0,2.854e-06,1.0
-chr1	6207701	.	GTTTGTTTGTTT	.	.	.	END=6207712;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999763:3,3:3-3,3-3:15,11,0,0:3,15:NULL:161.819:366.612,131.36:0.0,0.0:3e-45,0.000127729,0.999873	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.425:326.675,113.385:0.0,0.0:0.0,8.11456e-07,1.0
-chr1	6208513	.	GTTGTTGTTGTT	.	.	.	END=6208524;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:25,12,0,0:4,25:NULL:201.525:366.612,131.36:0.0,0.0:0.0,2.75179e-07,1.0	0/0:28:1.0:4,4:4-4,4-4:20,8,0,0:4,20:NULL:151.135:326.675,113.385:0.0,0.0:0.0,9.37241e-06,0.999993
-chr1	6208671	.	TTATTTTTATTTTTATTT	TTATTT	.	.	END=6208688;RU=ttattt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0737831:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.31:366.612,131.36:0.515232,0.515232:0.232985,0.519698,0.247355	0/0:26:0.99963:3,3:3-3,3-3:14,10,0,2:3,14:2,1|3,1:162.315:326.675,113.385:0.0,0.0:0.0,0.000182714,0.999819
-chr1	6210401	.	TTTGTTTGTTTG	.	.	.	END=6210412;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:188.78:366.612,131.36:0.0,0.0:0.0,1.50332e-06,1.0	0/0:20:0.998483:3,3:3-3,3-3:12,5,0,3:3,12:2,3:116.13:326.675,113.385:0.0,0.0:8.19467e-38,0.000558929,0.999445
-chr1	6219473	.	GTTTGTTTGTTTGTTT	.	.	.	END=6219488;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999952:4,4:4-4,4-4:17,15,0,3:4,17:2,1|3,2:231.814:366.612,131.36:0.0,0.0:0.0,2.74888e-05,0.999972	0/0:38:1.0:4,4:4-4,4-4:21,17,0,0:4,21:NULL:254.168:326.675,113.385:0.0,0.0:0.0,7.24935e-06,0.999994
-chr1	6219491	.	ATTTATTTATTT	.	.	.	END=6219502;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:20,21,0,2:3,20:2,2:293.52:366.612,131.36:0.0,0.0:0.0,2.06476e-06,1.0	0/0:45:1.0:3,3:3-3,3-3:25,17,0,3:3,25:2,3:289.229:326.675,113.385:0.0,0.0:0.0,1.11238e-07,1.0
-chr1	6224070	.	GTGTGTGTGTGT	.	.	.	END=6224081;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:6,6:6-6,6-6:21,13,0,2:6,21:4,1|5,1:220.392:366.612,131.36:0.0,0.0:0.0,3.66464e-06,1.0	0/0:33:1.00001:6,6:6-6,6-6:21,10,0,2:6,21:5,2:185.081:326.675,113.385:0.0,0.0:0.0,1.72515e-06,1.0
-chr1	6226500	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6226537;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0298444:35,35:33-36,33-36:0,9,0,2:NULL:29,1|31,1:100.568:366.612,131.36:0.877118,0.877118:0.0,0.0,1.0	0/0:43:0.997486:19,19:18-19,18-19:24,9,0,7:18,5|19,19:6,1|9,1|12,1|13,1|14,1|15,1|18,1:259.282:326.675,113.385:0.5093,0.5093:7.5948e-22,0.00251275,0.997495
-chr1	6226712	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=6226727;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999816:8,8:8-8,8-8:16,11,0,5:8,16:2,1|4,4:204.676:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:45:1.0:4,4:4-4,4-4:24,16,0,5:4,24:2,1|3,4:275.322:326.675,113.385:0.0,0.0:0.0,1.73189e-07,1.0
-chr1	6227414	.	TTGTTTGTTTGT	.	.	.	END=6227425;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,22,0,0:3,23:NULL:289.964:366.612,131.36:0.0,0.0:0.0,3.1637e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:212.816:326.675,113.385:0.0,0.0:0.0,4.12816e-06,0.999995
-chr1	6228918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6228955;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.953211:14,14:12-14,12-14:25,14,0,2:12,2|13,4|14,17|15,2:11,1|14,1:272.748:366.612,131.36:0.495643,0.495643:1.0,0.0,0.0	0/0:21:0.323881:19,19:19-22,19-22:3,6,0,11:19,3:4,1|6,3|11,2|15,2|16,1|18,2:155.522:326.675,113.385:1.40014,1.40014:0.000263973,0.159522,0.840288
-chr1	6229792	.	CAAAACAAAACAAAACAAAACAAAA	CAAAACAAAACAAAACAAAA	.	.	END=6229816;RU=caaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999971:4,4:4-4,4-4:18,16,0,0:4,18:NULL:223.227:366.612,131.36:0.0,0.0:0.999993,1.01201e-05,0.0	0/0:16:0.959818:5,5:5-5,5-5:8,6,0,2:5,8:2,1|3,1:100.318:326.675,113.385:0.0,0.0:1.16675e-24,0.0229229,0.977121
-chr1	6231061	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6231082;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.0552115:13,13:6-15,6-15:0,24,0,9:NULL:5,2|7,1|8,2|10,1|11,2|13,1:297.205:366.612,131.36:2.34668,2.34668:8.57626e-23,0.273988,0.726012	0/0:40:0.999295:11,11:9-12,9-12:22,10,0,6:11,20|12,2:5,1|6,2|9,1|10,2:232.667:326.675,113.385:0.410145,0.410145:5.22495e-29,2.21999e-06,1.0
-chr1	6232825	.	TTTGTTTGTTTG	TTTGTTTG	.	.	END=6232836;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:1.00001:2,2:2-2,2-2:18,16,0,2:2,18:2,2:229.027:366.612,131.36:0.0,0.0:0.999993,9.95117e-06,0.0	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.983:326.675,113.385:0.0,0.0:0.0,7.29909e-07,1.0
-chr1	6232863	.	TTTGTTTGTTTG	.	.	.	END=6232874;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:23,24,0,0:3,23:NULL:305.213:366.612,131.36:0.0,0.0:0.0,8.45102e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,8,0,3:3,22:2,3:182.425:326.675,113.385:0.0,0.0:0.0,7.23581e-07,1.0
-chr1	6232977	.	CTGCCTCTGCCTCTGCCT	CTGCCTCTGCCTCTGCCTCTGCCT	.	.	END=6232994;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:4,4:4-4,4-4:25,16,0,0:4,25:NULL:248.419:366.612,131.36:0.0,0.0:0.0,2.33065e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:200.399:326.675,113.385:0.0,0.0:0.0,7.36549e-07,1.0
-chr1	6233703	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6233722;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.995376:4,4:4-4,4-4:12,25,0,2:4,12:2,2:292.579:366.612,131.36:0.0,0.0:1.19963e-32,0.003873,0.996135	0/0:25:0.995233:4,4:4-4,4-4:11,11,0,3:4,11:2,1|3,2:169.752:326.675,113.385:0.0,0.0:3.18555e-30,0.00296114,0.997048
-chr1	6236385	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6236434;RU=gt;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.98567:12,12:12-12,12-12:13,19,0,3:11,2|12,11:9,1|11,2:261.163:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/0:31:0.477729:25,25:24-25,24-25:7,14,0,10:24,2|25,5:7,1|9,1|10,1|11,2|16,1|19,2|23,1|24,1:242.309:326.675,113.385:0.452422,0.452422:2.07637e-05,0.478374,0.521694
-chr1	6238596	.	ATTATTATTATT	ATTATTATTATTATT	.	.	END=6238607;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999236:5,5:4-5,4-5:15,16,0,0:5,15:NULL:213.502:366.612,131.36:0.270063,0.270063:0.0,0.000479854,0.999523	0/0:29:0.999393:4,4:4-4,4-4:15,14,0,0:4,15:NULL:194.976:326.675,113.385:0.0,0.0:2.88657e-37,0.000419021,0.999583
-chr1	6239066	.	TTTGTTTGTTTG	TTTGTTTGTTTGTTTG	.	.	END=6239077;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.271396:4,4:1-4,1-4:2,10,0,0:4,2:NULL:98.8609:366.612,131.36:0.634282,0.634282:1.00093e-11,0.342876,0.657149	0/0:29:0.999785:3,3:3-3,3-3:15,11,0,3:3,15:2,3:182.834:326.675,113.385:0.0,0.0:1.56924e-40,0.00010514,0.999896
-chr1	6240390	.	GTGCGTGCGTGC	GTGC	.	.	END=6240401;RU=gtgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0746064:1,1:1-4,1-4:0,22,0,0:NULL:NULL:201.478:366.612,131.36:0.92647,0.92647:0.230102,0.516179,0.253757	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:173.043:326.675,113.385:0.0,0.0:0.0,6.06587e-06,0.999994
-chr1	6247906	.	TGTTGTTGTTGTTGT	.	.	.	END=6247920;RU=tgt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.00001:5,5:5-5,5-5:22,25,0,0:5,22:NULL:313.808:366.612,131.36:0.0,0.0:0.0,3.09887e-06,1.0	0/0:38:1.0:5,5:4-5,4-5:24,11,0,2:5,24:3,1|4,1:216.699:326.675,113.385:0.236383,0.236383:0.0,4.22916e-07,1.0
-chr1	6250708	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=6250725;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:6,6:6-6,6-6:22,15,0,4:6,22:4,1|5,3:261.781:366.612,131.36:0.0,0.0:0.0,6.02088e-07,1.0	0/0:26:0.999563:6,6:6-6,6-6:15,9,0,2:6,15:3,1|5,1:161.233:326.675,113.385:0.0,0.0:1.7459e-41,0.000263725,0.999736
-chr1	6250858	.	TATGTATGTATGTATG	.	.	.	END=6250873;RU=tatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:24,21,0,2:4,24:3,2:303.256:366.612,131.36:0.0,0.0:0.0,3.88591e-07,1.0	0/0:32:0.994009:4,4:3-4,3-4:21,9,0,2:3,2|4,19:3,2:192.209:326.675,113.385:0.419363,0.419363:0.0,0.00601312,0.994001
-chr1	6251852	.	AAATAAATAAAT	.	.	.	END=6251863;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:21,19,0,0:3,21:NULL:250.565:366.612,131.36:0.0,0.0:0.0,4.20457e-06,0.999995	0/0:22:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.405:326.675,113.385:0.0,0.0:0.0,6.98634e-05,0.999933
-chr1	6252245	.	ATATATATATATATAT	ATATATATAT	.	.	END=6252260;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.428225:8,8:6-8,6-8:4,13,0,0:8,4:NULL:133.525:366.612,131.36:0.788482,0.788482:2.39144e-06,0.441308,0.558798	1/1:8:0.0176847:5,5:5-9,5-9:0,5,0,0:NULL:NULL:43.6947:326.675,113.385:1.38875,1.38875:0.375284,0.481424,0.14336
-chr1	6252276	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATAT,ATATATATATATATATATATATATATATATATAT	.	.	END=6252315;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.834081:5,5:3-5,3-5:6,8,0,0:5,6:NULL:95.4925:366.612,131.36:0.945117,0.945117:1.0,0.0,0.0	2/2:7:0.0197936:17,17:1-17,1-17:0,4,0,3:NULL:5,1|8,1|17,1:59.9756:326.675,113.385:5.72911,5.72911:0.76738,0.225041,0.00762246
-chr1	6260354	.	TAAATAAATAAA	.	.	.	END=6260365;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:28,12,0,0:3,28:NULL:217.602:366.612,131.36:0.0,0.0:0.0,2.08516e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:173.565:326.675,113.385:0.0,0.0:0.0,1.0302e-05,0.999993
-chr1	6266174	.	TTGTTTTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTT	.	.	END=6266198;RU=ttgtt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.997192:4,4:4-4,4-4:11,16,0,3:4,11:3,3:209.654:366.612,131.36:0.0,0.0:0.99877,0.00123274,1.72179e-30	0/0:29:0.999863:5,5:5-5,5-5:16,9,0,4:5,16:3,4:176.745:326.675,113.385:0.0,0.0:5.2806e-34,0.00010021,0.999902
-chr1	6267793	.	TGTTTGTTTGTT	.	.	.	END=6267804;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.997751:3,3:3-3,3-3:12,9,0,0:3,12:NULL:130.684:366.612,131.36:0.0,0.0:1.30609e-37,0.00086217,0.999142	0/0:39:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.408:326.675,113.385:0.0,0.0:0.0,2.42279e-06,1.0
-chr1	6269522	.	GTTGTTGTTGTT	.	.	.	END=6269533;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999964:4,4:4-4,4-4:18,7,0,0:4,18:NULL:136.356:366.612,131.36:0.0,0.0:0.0,2.879e-05,0.999972	0/0:39:1.00001:4,4:4-4,4-4:22,15,0,2:4,22:3,2:240.943:326.675,113.385:0.0,0.0:0.0,1.42327e-06,1.0
-chr1	6269576	.	GATAGGATAGGATAG	.	.	.	END=6269590;RU=gatag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:156.249:366.612,131.36:0.0,0.0:0.0,8.75009e-06,0.999994	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:218.717:326.675,113.385:0.0,0.0:0.0,7.19534e-08,1.0
-chr1	6271401	.	TCATCATCATCA	.	.	.	END=6271412;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999995:4,4:4-4,4-4:20,13,0,0:4,20:NULL:199.249:366.612,131.36:0.0,0.0:0.0,1.43347e-05,0.999987	0/0:25:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:121.848:326.675,113.385:0.0,0.0:0.0,7.85478e-06,0.999994
-chr1	6273501	.	TTCATTCATTCA	.	.	.	END=6273512;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:13:0.998792:3,3:3-3,3-3:13,0,0,0:3,13:NULL:50.7793:366.612,131.36:0.0,0.0:9.4724e-41,0.000490454,0.999514	0/0:19:0.999431:3,3:3-3,3-3:14,5,0,0:3,14:NULL:101.03:326.675,113.385:0.0,0.0:7.8e-44,0.000273069,0.999728
-chr1	6273618	.	ACCCACCCACCC	.	.	.	END=6273629;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.76159:3,3:3-3,3-3:5,2,0,0:3,5:NULL:36.5433:366.612,131.36:0.0,0.0:5.11652e-14,0.0983203,0.901783	0/0:21:0.989861:3,3:3-3,3-3:10,11,0,0:3,10:NULL:134.88:326.675,113.385:0.0,0.0:7.59975e-27,0.00483192,0.995182
-chr1	6274375	.	TTGTTTGTTTGTTTGTTTGT	.	.	.	END=6274394;RU=ttgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:3,2|4,2:171.617:366.612,131.36:0.0,0.0:0.0,1.3935e-06,1.0	0/0:37:1.0:5,5:5-5,5-5:26,7,0,4:5,26:3,1|4,3:196.057:326.675,113.385:0.0,0.0:0.0,4.63645e-08,1.0
-chr1	6276992	.	ATGATGATGATG	.	.	.	END=6277003;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:4,4:4-4,4-4:18,21,0,0:4,18:NULL:258.046:366.612,131.36:0.0,0.0:0.0,4.97124e-05,0.999949	0/0:33:1.00001:4,4:4-4,4-4:22,11,0,0:4,22:NULL:185.686:326.675,113.385:0.0,0.0:0.0,2.22016e-06,1.0
-chr1	6277038	.	AGCAGCAGCAGC	.	.	.	END=6277049;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999636:4,4:4-4,4-4:15,29,0,0:4,15:NULL:321.087:366.612,131.36:0.0,0.0:0.0,0.00034579,0.999658	0/0:33:1.00001:4,4:4-4,4-4:23,10,0,0:4,23:NULL:184.665:326.675,113.385:0.0,0.0:0.0,1.51151e-06,1.0
-chr1	6285646	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6285691;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.931843:25,26:24-25,25-26:10,12,0,14:24,2|25,5|26,3:12,1|13,1|15,3|16,2|19,2|20,1|22,2|25,2:276.338:366.612,131.36:0.240494,0.459304:3.22746e-34,0.000101141,0.999902	0/0:48:0.742702:23,23:22-24,22-24:14,13,0,20:22,3|23,9|24,2:5,2|6,1|7,1|8,1|9,1|12,1|14,1|15,3|16,1|17,3|18,1|21,1|22,1|23,2:352.699:326.675,113.385:0.561134,0.561134:1.89285e-24,0.0129286,0.987098
-chr1	6290853	.	TCCTTCCTTCCT	.	.	.	END=6290864;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999831:3,3:3-3,3-3:17,16,0,0:3,17:NULL:214.565:366.612,131.36:0.0,0.0:0.0,0.000103485,0.999896	0/0:52:1.0:3,3:3-3,3-3:32,20,0,0:3,32:NULL:317.715:326.675,113.385:0.0,0.0:0.0,4.87576e-09,1.0
-chr1	6293821	.	CTCCCTCCCTCC	.	.	.	END=6293832;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:170.023:366.612,131.36:0.0,0.0:0.0,4.76004e-06,0.999995	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:218.038:326.675,113.385:0.0,0.0:0.0,9.94156e-08,1.0
-chr1	6301879	.	AATAAATAAATA	.	.	.	END=6301890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:268.841:366.612,131.36:0.0,0.0:0.0,2.64398e-07,1.0	0/0:42:1.0:3,3:3-3,3-3:23,17,0,2:3,23:2,2:261.177:326.675,113.385:0.0,0.0:0.0,3.68189e-07,1.0
-chr1	6303590	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6303631;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:44:0.937064:25,25:22-25,22-25:14,11,0,18:24,3|25,11:5,1|9,2|10,1|12,2|13,2|14,3|15,1|16,1|18,1|20,1|21,1|22,1|23,1:316.407:366.612,131.36:0.915721,0.915721:0.0,3.48342e-05,0.999964	0/1:52:0.873441:21,23:21-21,20-23:14,13,0,24:20,3|21,9|22,2:4,1|5,1|6,2|7,1|8,1|9,3|10,1|11,2|13,1|15,3|16,2|18,1|19,1|20,3|23,1:393.598:326.675,113.385:0.0990099,1.0187:1.21109e-14,2.029e-06,1.0
-chr1	6311549	.	GGTGGTGGTGGT	.	.	.	END=6311560;RU=ggt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998851:4,4:4-4,4-4:14,11,0,0:4,14:NULL:160.95:366.612,131.36:0.0,0.0:0.0,0.000681921,0.999323	0/0:25:0.999576:4,4:4-4,4-4:15,10,0,0:4,15:NULL:155.49:326.675,113.385:0.0,0.0:0.0,0.000278707,0.999721
-chr1	6312247	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	.	END=6312294;RU=tccc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.0916072:12,12:11-13,11-13:0,16,0,9:NULL:3,1|4,1|6,1|8,1|9,2|10,1|11,2:209.337:366.612,131.36:0.790097,0.790097:0.120643,0.4686,0.410951	0/0:16:0.519107:12,12:11-12,11-12:4,6,0,5:12,4:3,1|4,2|8,1|10,1:109.704:326.675,113.385:0.486863,0.486863:3.2532e-09,0.268059,0.731941
-chr1	6312789	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6312844;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.30309:31,32:28-33,28-33:2,16,0,17:31,2:6,1|12,2|13,1|14,3|16,2|19,1|20,2|21,1|22,2|26,1|32,1:298.451:366.612,131.36:0.815616,0.844549:0.0,0.0,1.0	0/0:28:0.233564:28,28:25-29,25-29:2,11,0,12:28,2:6,1|7,1|8,1|12,1|13,1|14,1|19,1|21,2|26,1|27,1|28,1:211.077:326.675,113.385:1.44649,1.44649:1.4493e-10,0.228072,0.771956
-chr1	6317256	.	AAAAACAAAAACAAAAAC	.	.	.	END=6317273;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:191.254:366.612,131.36:0.0,0.0:0.0,2.07463e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:29,7,0,0:3,29:NULL:180.098:326.675,113.385:0.0,0.0:0.0,1.09115e-08,1.0
-chr1	6324793	.	TTATTTATTTAT	.	.	.	END=6324804;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:26,14,0,0:3,26:NULL:237.826:366.612,131.36:0.0,0.0:0.0,7.68292e-08,1.0	0/0:24:0.999899:3,3:3-3,3-3:16,5,0,3:3,16:2,3:131.718:326.675,113.385:0.0,0.0:0.0,3.49466e-05,0.999964
-chr1	6326106	.	CTGCTGCTGCTG	.	.	.	END=6326117;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:25,18,0,0:4,25:NULL:261.316:366.612,131.36:0.0,0.0:0.0,2.9682e-07,1.0	0/0:32:0.999879:4,4:4-4,4-4:17,15,0,0:4,17:NULL:206.579:326.675,113.385:0.0,0.0:0.0,9.01237e-05,0.999911
-chr1	6328025	.	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	TCCCTCTCCCTCTCCCTCTCCCTCTCCCTC	.	.	END=6328108;RU=tccctc;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:24:0.323834:5,14:3-13,11-15:2,10,0,11:5,2:2,1|3,1|4,2|5,1|6,1|10,1|11,1|12,1|13,1|14,1:178.554:366.612,131.36:1.80051,1.17184:8.72804e-09,1.0,2.80873e-36	0/0:19:0.276711:14,14:11-14,11-14:2,7,0,10:14,2:2,1|4,1|5,1|6,1|7,2|9,1|10,1|12,1|13,1:148.089:326.675,113.385:0.927845,0.927845:0.00346715,0.435722,0.560919
-chr1	6329503	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6329524;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999981:11,11:10-12,10-12:19,18,0,5:11,19:4,1|9,1|10,3:279.328:366.612,131.36:0.385249,0.385249:1.54556e-29,1.48909e-05,0.999986	0/0:49:0.355466:11,11:10-11,10-11:20,21,0,7:10,5|11,15:4,1|6,1|8,2|10,2|11,1:344.554:326.675,113.385:0.516562,0.516562:1.06726e-25,0.644578,0.355461
-chr1	6330314	.	TGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6330337;RU=tg;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.717376:21,21:19-21,19-21:6,18,0,13:21,6:8,2|11,1|12,2|13,3|16,2|18,1|19,2:296.872:366.612,131.36:0.481599,0.481599:0.0,0.0,1.0	0/0:37:0.999663:12,12:12-12,12-12:16,15,0,4:12,16:7,2|11,2:241.719:326.675,113.385:0.0,0.0:9.40051e-21,0.000149188,0.99985
-chr1	6332594	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=6332633;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.00001:9,9:9-9,9-9:21,18,0,17:9,21:2,1|3,1|4,4|5,3|6,2|7,2|8,4:375.193:366.612,131.36:0.0,0.0:0.0,1.36888e-07,1.0	0/0:39:0.999945:8,8:8-8,8-8:17,12,0,10:8,17:3,2|4,1|5,3|6,2|7,2:256.922:326.675,113.385:0.0,0.0:0.0,3.51892e-05,0.999964
-chr1	6332921	.	TGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=6332940;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999962:5,5:5-5,5-5:18,17,0,0:5,18:NULL:235.869:366.612,131.36:0.0,0.0:0.0,3.68095e-05,0.999964	0/0:31:1.00001:4,4:4-4,4-4:20,7,0,4:4,20:3,4:174.049:326.675,113.385:0.0,0.0:0.0,2.65643e-06,1.0
-chr1	6341827	.	TTTATTTATTTATTTATTTA	.	.	.	END=6341846;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999931:5,5:5-5,5-5:17,13,0,3:5,17:2,1|3,1|4,1:208.003:366.612,131.36:0.0,0.0:0.0,4.02341e-05,0.999963	0/0:31:0.997836:5,5:5-5,5-5:12,11,0,8:5,12:3,3|4,5:204.514:326.675,113.385:0.0,0.0:6.80122e-33,0.000836161,0.999166
-chr1	6345062	.	TATTATTATTATTATTATTATTATTATTAT	.	.	.	END=6345091;RU=tat;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.583909:10,10:9-10,9-10:10,10,0,4:9,2|10,8:5,1|7,1|8,2:173.1:366.612,131.36:0.492866,0.492866:1.20285e-11,0.412318,0.587755	0/0:21:0.71864:10,10:9-10,9-10:11,7,0,3:9,2|10,9:7,3:136.316:326.675,113.385:0.452422,0.452422:3.92122e-13,0.278474,0.721527
-chr1	6347126	.	ATTTATTTATTT	.	.	.	END=6347137;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:30,30,0,0:3,30:NULL:385.253:366.612,131.36:0.0,0.0:0.0,5.45747e-09,1.0	0/0:30:1.00001:3,3:3-4,3-4:21,8,0,0:3,21:NULL:157.025:326.675,113.385:0.21692,0.21692:0.0,2.56255e-06,1.0
-chr1	6348865	.	TTGTTGTTGTTGTTG	.	.	.	END=6348879;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:5,5:5-5,5-5:20,12,0,2:5,20:4,1|5,1:200.063:366.612,131.36:0.0,0.0:0.0,2.3945e-06,1.0	0/0:41:1.0:5,5:5-5,5-5:27,9,0,5:5,27:4,5:225.486:326.675,113.385:0.0,0.0:0.0,1.41317e-08,1.0
-chr1	6354453	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6354502;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:21:0.260449:31,37:28-31,28-38:2,10,0,8:31,2:7,1|8,1|12,1|19,1|28,1|29,1|32,1|36,1:170.006:366.612,131.36:1.55707,3.13366:0.0,0.0,1.0	0/0:37:0.614482:25,25:19-25,19-25:8,17,0,10:24,2|25,6:5,2|6,1|7,1|13,1|17,1|19,1|20,2|22,1:280.44:326.675,113.385:2.29536,2.29536:5.97258e-07,0.33895,0.661073
-chr1	6354954	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6354981;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:35:0.0666914:29,36:23-36,27-37:0,18,0,17:NULL:5,1|7,1|8,1|14,1|16,1|17,1|19,1|22,3|23,1|26,1|27,2|28,1|29,1|36,1:297.47:366.612,131.36:4.02078,3.49958:0.0,0.00311768,0.99689	1/0:24:0.801285:13,14:13-14,14-14:12,8,0,4:13,4|14,8:7,1|8,2|11,1:159.248:326.675,113.385:0.494455,0.0:1.73115e-09,0.801783,0.198264
-chr1	6355000	.	AGGCAGGCAGGC	.	.	.	END=6355011;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:170.882:366.612,131.36:0.0,0.0:0.0,6.52171e-06,0.999994	0/0:32:0.999998:3,3:3-3,3-3:18,11,0,3:3,18:2,3:190.865:326.675,113.385:0.0,0.0:0.0,1.01497e-05,0.999993
-chr1	6357634	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6357691;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.00843527:1,1:1-8,1-8:0,13,0,0:NULL:NULL:117.297:366.612,131.36:2.03936,2.03936:0.854868,0.142426,0.00279405	2/2:23:0.132999:28,28:17-29,17-29:2,8,0,11:28,2:5,1|10,1|11,1|13,3|15,1|17,1|20,1|21,2:172.541:326.675,113.385:5.3983,5.3983:0.748314,0.241926,0.00978573
-chr1	6359367	.	CTGCTGCTGCTG	.	.	.	END=6359378;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:64:1.0:4,4:4-4,4-4:37,27,0,0:4,37:NULL:395.923:366.612,131.36:0.0,0.0:0.0,2.29575e-10,1.0	0/0:61:1.0:4,4:4-4,4-4:39,22,0,0:4,39:NULL:362.516:326.675,113.385:0.0,0.0:0.0,4.16911e-11,1.0
-chr1	6368193	.	CATCATCATCAT	.	.	.	END=6368204;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999976:4,4:4-4,4-4:18,7,0,0:4,18:NULL:145.628:366.612,131.36:0.0,0.0:0.0,3.0766e-05,0.999971	0/0:39:1.0:4,4:4-5,4-5:30,8,0,0:4,30:NULL:188.186:326.675,113.385:0.236383,0.236383:0.0,7.14351e-09,1.0
-chr1	6368347	.	TTTATTTATTTATTTATTTA	TTTA,TTTATTTA	.	.	END=6368366;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:19:0.165475:1,2:1-4,1-4:0,19,0,0:NULL:NULL:196.82:366.612,131.36:0.868696,0.813208:0.728826,0.258439,0.0127586	0/0:30:0.997218:5,5:5-5,5-5:12,18,0,0:5,12:NULL:207.885:326.675,113.385:0.0,0.0:1.13771e-33,0.00223835,0.997768
-chr1	6371007	.	AGGTAGGTAGGT	.	.	.	END=6371018;RU=aggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:27,20,0,3:3,27:2,3:310.643:366.612,131.36:0.0,0.0:0.0,5.70152e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:259.845:326.675,113.385:0.0,0.0:0.0,1.20261e-07,1.0
-chr1	6371335	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=6371382;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.578901:9,9:8-10,8-10:9,13,0,3:8,2|9,7:5,1|6,1|7,1:185.232:366.612,131.36:0.598171,0.598171:1.0,0.0,0.0	2/2:4:0.026833:23,23:21-25,21-25:0,3,0,0:NULL:NULL:31.1618:326.675,113.385:0.859164,0.859164:0.231877,0.505364,0.262804
-chr1	6379206	.	AAACAAACAAAC	.	.	.	END=6379217;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:19,15,0,4:3,19:2,4:244.686:366.612,131.36:0.0,0.0:0.0,6.60564e-06,0.999994	0/0:47:1.0:3,3:3-3,3-3:36,11,0,0:3,36:NULL:244.338:326.675,113.385:0.0,0.0:0.0,7.01717e-11,1.0
-chr1	6379384	.	TGTTTTGTTTTGTTT	.	.	.	END=6379398;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999979:3,3:3-3,3-3:18,13,0,0:3,18:NULL:193.535:366.612,131.36:0.0,0.0:0.0,2.71137e-05,0.999972	0/0:29:1.0:3,3:3-3,3-3:19,7,0,3:3,19:2,3:161.935:326.675,113.385:0.0,0.0:0.0,4.73307e-06,0.999995
-chr1	6386715	.	GCCAGCCAGCCA	.	.	.	END=6386726;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:25,17,0,2:3,25:2,2:277.144:366.612,131.36:0.0,0.0:0.0,7.65198e-08,1.0	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:170.238:326.675,113.385:0.0,0.0:0.0,2.20524e-06,1.0
-chr1	6389231	.	TGAGAATGAGAATGAGAA	.	.	.	END=6389248;RU=tgagaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:33,16,0,2:3,33:2,2:292.834:366.612,131.36:0.0,0.0:0.0,4.11387e-10,1.0	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:227.167:326.675,113.385:0.0,0.0:0.0,1.66007e-06,1.0
-chr1	6390202	.	TATATATATATATATATATATA	TATATATATATATATATATA	.	.	END=6390223;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.999128:10,10:9-10,9-10:15,11,0,0:10,15:NULL:167.229:366.612,131.36:0.195027,0.195027:0.999789,0.000212479,1.24383e-18	0/0:11:0.886395:11,11:11-11,11-11:7,4,0,0:11,7:NULL:68.6352:326.675,113.385:0.0,0.0:7.10004e-08,0.0573829,0.942704
-chr1	6390677	.	ACATACATACATACATACATACATACATACAT	ACATACATACATACATACATACATACATACATACAT	.	.	END=6390708;RU=acat;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:56:0.786703:8,9:8-9,9-9:12,20,0,24:8,2|9,10:2,1|3,2|4,3|5,4|6,6|7,3|8,5:412.331:366.612,131.36:0.491073,0.0:0.0,2.75677e-05,0.999972	0/0:40:0.999966:8,8:8-8,8-8:18,16,0,6:8,18:3,2|6,2|7,2:261.855:326.675,113.385:0.0,0.0:2.71797e-36,3.02089e-05,0.999971
-chr1	6391128	.	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTG	.	.	.	END=6391159;RU=tctg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:0.99995:8,8:8-8,8-8:17,26,0,11:8,17:2,1|3,1|4,2|5,2|6,2|7,3:385.269:366.612,131.36:0.0,0.0:0.0,3.36673e-05,0.99997	0/0:24:0.998722:8,8:8-8,8-8:13,5,0,6:8,13:2,1|3,3|4,1|6,1:142.657:326.675,113.385:0.0,0.0:3.41302e-38,0.000658743,0.999346
-chr1	6391479	.	CAAACAAACAAA	.	.	.	END=6391490;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:23,25,0,3:3,23:2,3:351.872:366.612,131.36:0.0,0.0:0.0,2.91798e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:213.709:326.675,113.385:0.0,0.0:0.0,4.31277e-07,1.0
-chr1	6394101	.	AAAACAAAACAAAAC	.	.	.	END=6394115;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999747:3,3:3-3,3-3:16,17,0,0:3,16:NULL:215.353:366.612,131.36:0.0,0.0:0.0,0.000173326,0.999827	0/0:29:0.999992:3,3:3-3,3-3:18,9,0,2:3,18:2,2:166.137:326.675,113.385:0.0,0.0:0.0,1.259e-05,0.999987
-chr1	6403250	.	TGTTTGTTTGTT	.	.	.	END=6403261;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.996921:3,3:3-3,3-3:12,9,0,0:3,12:NULL:130.745:366.612,131.36:0.0,0.0:7.23095e-40,0.00189695,0.998109	0/0:23:0.998589:3,3:3-3,3-3:12,8,0,3:3,12:2,3:146.182:326.675,113.385:0.0,0.0:1.93543e-40,0.000508567,0.999493
-chr1	6410410	.	CCACCCCCACCCCCACCC	.	.	.	END=6410427;RU=ccaccc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999998:3,3:3-3,3-3:21,28,0,4:3,21:2,4:369.966:366.612,131.36:0.0,0.0:0.0,4.48486e-06,0.999995	0/0:37:0.999862:3,3:3-3,3-3:17,20,0,0:3,17:NULL:262.94:326.675,113.385:0.0,0.0:0.0,0.000146166,0.999857
-chr1	6411672	.	CCACCACCACCA	CCACCACCACCACCA	.	.	END=6411683;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.933194:5,5:5-5,5-5:7,19,0,0:5,7:NULL:196.656:366.612,131.36:0.0,0.0:7.30312e-38,0.0317498,0.968307	0/0:24:0.984921:4,4:4-4,4-4:10,14,0,0:4,10:NULL:168.232:326.675,113.385:0.0,0.0:1.06299e-23,0.0104089,0.989612
-chr1	6412880	.	TATGTATGTATG	.	.	.	END=6412891;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:243.736:366.612,131.36:0.0,0.0:0.0,6.45001e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:151.166:326.675,113.385:0.0,0.0:0.0,2.57264e-07,1.0
-chr1	6415172	.	TATATATATATATATATATATA	TATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA	.	.	END=6415193;RU=ta;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:11:0.231832:12,18:12-18,12-18:2,5,0,2:12,2:6,1|17,1:72.2046:366.612,131.36:1.68794,1.37135:3.04941e-11,0.000441063,0.999561	0/0:9:0.571699:11,11:7-11,7-11:5,3,0,0:11,5:NULL:50.6524:326.675,113.385:1.9881,1.9881:5.17558e-08,0.304474,0.695536
-chr1	6417480	.	AGCTGGAGAAGCTGGAGAAGCTGGAGAAGCTGGAGA	.	.	.	END=6417515;RU=agctggaga;PERIOD=9;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999987:4,4:4-4,4-4:19,20,0,3:4,19:2,1|3,2:285.284:366.612,131.36:0.0,0.0:0.0,2.44925e-05,0.999978	0/0:44:0.999971:4,4:4-4,4-4:18,22,0,4:4,18:2,1|3,3:299.858:326.675,113.385:0.0,0.0:0.0,3.82692e-05,0.999963
-chr1	6419181	.	TTCCTTTCCTTTCCT	.	.	.	END=6419195;RU=ttcct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,18,0,2:3,24:2,2:278.409:366.612,131.36:0.0,0.0:0.0,3.33255e-07,1.0	0/0:69:1.0:3,3:3-3,3-3:57,12,0,0:3,57:NULL:335.583:326.675,113.385:0.0,0.0:0.0,4.64831e-17,1.0
-chr1	6419368	.	TCTCTTTCTCTTTCTCTTTCTCTT	.	.	.	END=6419391;RU=tctctt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999994:4,4:4-4,4-4:20,18,0,0:4,20:NULL:245.529:366.612,131.36:0.139319,0.139319:0.0,1.87967e-05,0.999985	0/0:49:1.0:4,4:4-4,4-4:30,13,0,6:4,30:3,6:283.516:326.675,113.385:0.0,0.0:0.0,2.87679e-09,1.0
-chr1	6419434	.	CTCCTCCTCCTCCTCCTCCTC	CTCCTCCTCCTCCTCCTC	.	.	END=6419454;RU=ctc;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.0:6,6:6-6,6-6:26,18,0,5:6,26:3,2|4,2|5,1:306.28:366.612,131.36:0.0,0.0:1.0,9.48715e-08,0.0	0/0:20:0.997097:7,7:3-7,3-7:13,6,0,0:7,13:NULL:113.007:326.675,113.385:1.92721,1.92721:4.64473e-22,0.00220684,0.997799
-chr1	6424394	.	TTGTTGTTGTTG	.	.	.	END=6424405;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999994:4,4:4-4,4-4:19,12,0,0:4,19:NULL:180.0:366.612,131.36:0.0,0.0:0.0,1.33005e-05,0.999987	0/0:26:0.999895:4,4:4-4,4-4:16,8,0,2:4,16:3,2:149.289:326.675,113.385:0.0,0.0:0.0,5.31242e-05,0.999948
-chr1	6427092	.	ATATATATATATATATATATATATAT	AT	.	.	END=6427117;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0172122:1,1:1-3,1-3:0,11,0,0:NULL:NULL:99.9566:366.612,131.36:0.48807,0.48807:0.560778,0.398671,0.0406984	0/0:12:0.373616:13,13:9-13,9-13:9,1,0,0:12,3|13,6:NULL:55.0636:326.675,113.385:1.49816,1.49816:5.54377e-05,0.610766,0.389242
-chr1	6427177	.	ATTTATTTATTTATTT	ATTTATTT	.	.	END=6427192;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0306123:2,2:1-3,1-3:0,11,0,0:NULL:NULL:101.966:366.612,131.36:0.732539,0.732539:0.248395,0.537449,0.214171	0/0:20:0.981664:4,4:4-4,4-4:9,9,0,2:4,9:3,2:132.02:326.675,113.385:0.0,0.0:7.25624e-25,0.00914487,0.990874
-chr1	6441337	.	GCCGCCGCCGCCGCC	GCCGCCGCCGCC	.	.	END=6441351;RU=gcc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:1.0:4,4:4-4,4-4:32,29,0,0:4,32:NULL:391.05:366.612,131.36:0.0,0.0:1.0,5.48193e-10,0.0	0/0:73:1.0:5,5:5-5,5-5:48,22,0,3:5,48:3,2|4,1:418.21:326.675,113.385:0.0,0.0:0.0,3.65892e-14,1.0
-chr1	6441476	.	GCCGGCCGGCCG	.	.	.	END=6441487;RU=gccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:3,3:3-3,3-3:34,26,0,3:3,34:2,3:391.166:366.612,131.36:0.0,0.0:0.0,2.98874e-10,1.0	0/0:86:1.0:3,3:3-3,3-3:39,39,0,8:3,39:2,8:565.491:326.675,113.385:0.0,0.0:0.0,1.5715e-11,1.0
-chr1	6442029	.	AACAACAACAACAACAACAACAACAACAACAACAAC	AACAACAACAACAACAACAACAACAACAACAACAACAAC	.	.	END=6442064;RU=aac;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.868709:13,13:13-13,13-13:6,18,0,0:13,6:NULL:198.809:366.612,131.36:0.0,0.0:2.86275e-18,0.0676645,0.932431	0/0:42:1.0:12,12:12-12,12-12:19,17,0,6:12,19:4,1|6,1|10,2|11,2:285.658:326.675,113.385:0.0,0.0:0.0,7.73598e-06,0.999994
-chr1	6442239	.	TAAGATTGTAAGATTGTAAGATTG	.	.	.	END=6442262;RU=taagattg;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:24,20,0,0:3,24:NULL:278.112:366.612,131.36:0.0,0.0:0.0,1.08989e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:253.768:326.675,113.385:0.0,0.0:0.0,2.23496e-07,1.0
-chr1	6443834	.	GTTGGTTGGTTG	.	.	.	END=6443845;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:216.65:366.612,131.36:0.0,0.0:0.0,1.78562e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:29,4,0,0:3,29:NULL:154.01:326.675,113.385:0.0,0.0:0.0,7.97915e-09,1.0
-chr1	6444502	.	CTGCTGCTGCTG	.	.	.	END=6444513;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:220.241:366.612,131.36:0.0,0.0:0.0,5.32636e-06,0.999995	0/0:34:0.999896:4,4:4-4,4-4:17,17,0,0:4,17:NULL:221.897:326.675,113.385:0.0,0.0:0.0,8.4194e-05,0.999918
-chr1	6445953	.	TATTTTATTTTATTTTATTTTATTT	TATTTTATTTTATTT	.	.	END=6445977;RU=tattt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.986539:3,3:3-3,3-3:10,5,0,0:3,10:NULL:89.0863:366.612,131.36:0.0,0.0:0.996391,0.00361845,7.5186e-31	0/0:15:0.959768:5,5:5-5,5-5:8,5,0,2:5,8:3,1|4,1:94.2959:326.675,113.385:0.0,0.0:1.15631e-17,0.0226392,0.977405
-chr1	6450086	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6450121;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:15:0.251893:15,33:15-20,19-36:5,7,0,2:15,3|19,2:13,1|33,1:116.95:366.612,131.36:2.13292,6.6362:8.74514e-06,0.971979,0.0280665	2/0:29:0.93274:17,18:17-18,18-18:15,6,0,7:17,6|18,9:4,1|5,1|6,1|7,2|10,1|15,1:190.025:326.675,113.385:0.437216,0.0:1.14586e-09,0.932763,0.0673315
-chr1	6453097	.	TTTGTTTGTTTG	.	.	.	END=6453108;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999862:3,3:3-3,3-3:16,13,0,0:3,16:NULL:180.898:366.612,131.36:0.0,0.0:0.0,0.000100186,0.999903	0/0:32:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:174.755:326.675,113.385:0.0,0.0:0.0,1.27653e-06,1.0
-chr1	6454520	.	ATCATCATCATCATC	.	.	.	END=6454534;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:5,5:5-5,5-5:28,24,0,3:5,28:4,3:348.08:366.612,131.36:0.0,0.0:0.0,1.93185e-08,1.0	0/0:50:1.0:5,5:5-5,5-5:31,16,0,3:5,31:4,3:293.005:326.675,113.385:0.0,0.0:0.0,1.47837e-09,1.0
-chr1	6455399	.	AGAAAAGAAAAGAAA	.	.	.	END=6455413;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996704:3,3:3-3,3-3:11,18,0,0:3,11:NULL:208.198:366.612,131.36:0.0,0.0:5.81437e-37,0.00226207,0.997745	0/0:22:0.997507:3,3:3-3,3-3:12,10,0,0:3,12:NULL:142.479:326.675,113.385:0.0,0.0:1.9739e-40,0.00158037,0.998427
-chr1	6456272	.	ACACACACACACACACACACAC	ACACACACACACACACACACACAC	.	.	END=6456293;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:12,12:12-12,12-12:24,20,0,10:12,24:5,3|9,1|11,6:355.119:366.612,131.36:0.0,0.0:0.0,4.39573e-09,1.0	0/0:54:1.0:11,11:11-11,11-11:21,21,0,11:11,21:4,1|5,1|6,3|7,1|8,2|9,1|10,2:368.916:326.675,113.385:0.0,0.0:4.12443e-30,4.83856e-06,0.999995
-chr1	6456451	.	GTGGTGGTGGTGGTG	.	.	.	END=6456465;RU=gtg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:5,5:5-5,5-5:30,15,0,5:5,30:4,5:290.961:366.612,131.36:0.0,0.0:0.0,1.93579e-09,1.0	0/0:56:1.0:5,5:5-5,5-5:38,13,0,5:5,38:4,5:310.504:326.675,113.385:0.0,0.0:0.0,9.48682e-12,1.0
-chr1	6459379	.	AAAACAAAACAAAACAAAAC	.	.	.	END=6459398;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999802:4,4:4-4,4-4:16,5,0,0:4,16:NULL:110.009:366.612,131.36:0.0,0.0:0.0,0.000120563,0.99988	0/0:23:0.999975:4,4:4-4,4-4:18,5,0,0:4,18:NULL:119.271:326.675,113.385:0.0,0.0:0.0,3.32964e-05,0.99997
-chr1	6461977	.	TTTTCTTTTCTTTTC	.	.	.	END=6461991;RU=ttttc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999407:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.461:366.612,131.36:0.0,0.0:0.0,0.000331563,0.999673	0/0:32:1.0:3,3:3-3,3-3:19,11,0,2:3,19:2,2:180.804:326.675,113.385:0.0,0.0:0.0,6.43755e-06,0.999995
-chr1	6467447	.	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	.	.	.	END=6467494;RU=agaa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.865652:12,12:12-12,12-12:5,14,0,7:12,5:5,2|8,2|10,1|11,2:202.893:366.612,131.36:0.0,0.0:7.7543e-13,0.0593063,0.940778	0/0:27:0.718776:12,12:9-12,9-12:6,16,0,5:12,6:3,1|4,2|7,1|10,1:220.248:326.675,113.385:0.574428,0.574428:6.58609e-14,0.254121,0.745886
-chr1	6467698	.	CCCTTCCCTTCCCTT	.	.	.	END=6467712;RU=ccctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999956:3,3:3-3,3-3:17,19,0,3:3,17:2,3:261.031:366.612,131.36:0.0,0.0:0.0,3.89303e-05,0.999963	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:237.557:326.675,113.385:0.0,0.0:0.0,1.90104e-07,1.0
-chr1	6467732	.	TGTGTGTGTGTGTG	.	.	.	END=6467745;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999988:7,7:6-7,6-7:19,24,0,4:7,19:5,1|6,3:323.777:366.612,131.36:0.169767,0.169767:1.22758e-37,8.88063e-06,0.999994	0/0:45:1.0:7,7:7-7,7-7:26,13,0,5:7,26:6,4|7,1:264.22:326.675,113.385:0.0990099,0.0990099:0.0,2.91863e-08,1.0
-chr1	6470121	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6470162;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:52:0.419116:25,25:24-25,24-25:12,20,0,19:24,4|25,8:6,1|7,1|8,1|9,2|10,1|11,1|13,1|15,1|16,3|17,1|20,1|21,1|22,2|24,2:396.669:366.612,131.36:0.491073,0.491073:0.0,1.55313e-05,0.999986	0/1:71:0.984002:21,22:20-21,20-22:16,24,0,31:20,5|21,9|22,2:4,1|5,2|6,2|8,4|9,3|10,1|11,1|13,4|14,2|15,3|16,1|19,3|20,3|22,1:557.227:326.675,113.385:0.390807,0.725277:3.74851e-13,0.00585111,0.994165
-chr1	6474556	.	TTGTTGTTGTTG	.	.	.	END=6474567;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.00001:4,4:4-4,4-4:22,24,0,0:4,22:NULL:309.116:366.612,131.36:0.0,0.0:0.0,2.64898e-06,1.0	0/0:34:1.0:4,4:4-4,4-4:19,13,0,2:4,19:3,2:211.583:326.675,113.385:0.0,0.0:0.0,8.20497e-06,0.999994
-chr1	6479132	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6479171;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.818742:21,21:18-21,18-21:7,18,0,6:21,7:6,1|7,1|9,1|12,1|18,2:244.382:366.612,131.36:1.43581,1.43581:9.04679e-12,0.0961955,0.903909	0/1:36:0.701656:20,21:19-20,19-21:11,16,0,9:19,3|20,5|21,3:7,2|8,2|9,1|10,1|15,1|18,1|19,1:281.897:326.675,113.385:0.425627,0.791708:2.93234e-06,0.159303,0.84077
-chr1	6481961	.	AATAAATAAATA	.	.	.	END=6481972;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999864:3,3:3-3,3-3:16,8,0,0:3,16:NULL:135.705:366.612,131.36:0.0,0.0:0.0,6.6863e-05,0.999934	0/0:35:0.999832:3,3:3-3,3-3:16,19,0,0:3,16:NULL:233.09:326.675,113.385:0.0,0.0:0.0,0.000120095,0.999881
-chr1	6485320	.	AATTTAATTTAATTT	.	.	.	END=6485334;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998443:3,3:3-3,3-3:13,15,0,0:3,13:NULL:191.214:366.612,131.36:0.0,0.0:3.21756e-38,0.00108093,0.998922	0/0:19:0.988664:3,3:3-3,3-3:10,9,0,0:3,10:NULL:122.733:326.675,113.385:0.0,0.0:2.01741e-29,0.0065498,0.993466
-chr1	6485835	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6485900;RU=tc;PERIOD=2;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:33:0.296222:31,31:30-32,30-32:2,17,0,12:31,2:6,1|7,1|11,1|13,2|20,1|22,1|23,1|26,1|27,1|29,1|30,1:262.25:366.612,131.36:0.696174,0.696174:0.758903,0.240269,0.000848255	1/1:28:0.0592474:30,30:29-33,29-33:0,16,0,10:NULL:7,1|8,1|10,1|13,1|20,1|25,2|26,1|27,1|30,1:233.514:326.675,113.385:1.16057,1.16057:0.424781,0.462446,0.112889
-chr1	6486465	.	ATAATAATAATAATAATA	ATAATAATAATAATA	.	.	END=6486482;RU=ata;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.00001:5,5:5-5,5-5:22,15,0,0:5,22:NULL:226.929:366.612,131.36:0.0,0.0:1.0,1.61118e-06,1.10998e-39	0/0:31:0.848806:6,6:5-7,5-7:14,16,0,0:6,12|7,2:NULL:212.196:326.675,113.385:0.573403,0.573403:4.96e-21,0.00105893,0.998945
-chr1	6486709	.	GAGGTAGAGGTAGAGGTA	.	.	.	END=6486726;RU=gaggta;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:82:1.0:3,3:3-3,3-3:31,51,0,0:3,31:NULL:573.653:366.612,131.36:0.0,0.0:0.0,2.10299e-08,1.0	0/0:64:1.0:3,3:3-3,3-3:26,38,0,0:3,26:NULL:437.551:326.675,113.385:0.0,0.0:0.0,3.27061e-07,1.0
-chr1	6489307	.	AACCAACCAACCAACCAACCAACCAACCAACC	AACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACCAACC	.	.	END=6489338;RU=aacc;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.25467:13,13:11-13,11-13:2,7,0,2:13,2:4,1|9,1:89.9995:366.612,131.36:0.634282,0.634282:0.0,0.0,1.0	0/0:35:0.999807:8,8:8-8,8-8:16,14,0,5:8,16:2,1|3,1|4,1|7,2:234.493:326.675,113.385:0.0,0.0:9.71125e-37,0.000126954,0.999873
-chr1	6497659	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6497698;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:52:0.427282:22,25:22-22,19-26:10,26,0,13:22,10:5,1|6,1|11,2|12,2|14,1|15,2|18,3|25,1:396.318:366.612,131.36:0.29703,1.7353:6.86936e-27,4.79342e-07,1.0	0/0:54:0.961433:20,20:18-20,18-20:15,22,0,15:19,3|20,12:4,1|5,1|11,2|12,2|14,1|15,3|16,1|17,1|18,2|19,1:397.666:326.675,113.385:0.694341,0.694341:2.62129e-12,0.0371701,0.962893
-chr1	6507213	.	GGCAGGCAGGCA	.	.	.	END=6507224;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:0.999988:3,3:3-3,3-3:20,54,0,0:3,20:NULL:564.517:366.612,131.36:0.0,0.0:0.0,2.21705e-05,0.999979	0/0:66:1.0:3,3:3-3,3-3:19,41,0,6:3,19:2,6:480.663:326.675,113.385:0.0,0.0:0.0,5.54561e-06,0.999995
-chr1	6507332	.	CACACACACACACACA	CACACACACACA	.	.	END=6507347;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.238502:6,6:3-6,3-6:2,29,0,0:6,2:NULL:276.117:366.612,131.36:1.17884,1.17884:0.890963,0.109137,2.63841e-08	0/0:29:0.217846:8,8:5-8,5-8:2,27,0,0:8,2:NULL:258.606:326.675,113.385:1.2144,1.2144:0.000712133,0.468084,0.531312
-chr1	6507470	.	GTTGTTGTTGTT	.	.	.	END=6507481;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:68:1.0:4,4:4-4,4-4:40,22,0,4:4,40:3,4:391.267:366.612,131.36:0.0,0.0:0.0,2.86979e-12,1.0	0/0:42:1.0:4,4:4-4,4-4:30,9,0,3:4,30:3,3:232.787:326.675,113.385:0.0,0.0:0.0,3.9359e-09,1.0
-chr1	6509128	.	AAGAAAGAAAGA	.	.	.	END=6509139;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:27,23,0,0:3,27:NULL:320.759:366.612,131.36:0.0,0.0:0.0,5.62015e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:223.052:326.675,113.385:0.0,0.0:0.0,5.27716e-08,1.0
-chr1	6509313	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6509338;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:49:0.997491:17,17:13-17,13-17:17,15,0,15:16,2|17,15:5,1|6,4|7,1|8,1|12,1|13,1|14,1|16,5:333.024:366.612,131.36:0.974229,0.974229:0.0,6.11081e-07,1.0	0/1:32:0.646039:13,14:13-13,13-14:11,15,0,5:13,11:8,2|9,1|10,1|14,1:229.145:326.675,113.385:0.0,0.484441:2.72351e-19,9.01106e-08,1.0
-chr1	6509599	.	AAAAGAAAAGAAAAG	.	.	.	END=6509613;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999935:3,3:3-3,3-3:16,15,0,4:3,16:2,4:228.976:366.612,131.36:0.0,0.0:0.0,4.68756e-05,0.999956	0/0:26:0.999312:3,3:3-3,3-3:14,12,0,0:3,14:NULL:169.371:326.675,113.385:0.0,0.0:0.0,0.000471465,0.99953
-chr1	6513189	.	ACAAGTACAAGTACAAGT	ACAAGT	.	.	END=6513206;RU=acaagt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0778033:1,1:1-3,1-3:0,14,0,0:NULL:NULL:127.912:366.612,131.36:0.916684,0.916684:0.198352,0.51361,0.288123	0/0:28:0.999984:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.592:326.675,113.385:0.0,0.0:0.0,2.41846e-05,0.999978
-chr1	6519516	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC	.	.	END=6519555;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.326169:10,17:10-10,10-17:11,24,0,4:9,2|10,9:9,1|10,1|14,2:315.968:366.612,131.36:0.0,2.45293:1.0,0.0,0.0	0/0:35:0.811379:20,20:19-21,19-21:17,10,0,8:19,4|20,11|21,2:6,1|12,1|14,1|15,1|17,2|18,1|19,1:246.071:326.675,113.385:0.635209,0.635209:2.88909e-13,0.0495004,0.95058
-chr1	6519558	.	GTGTGTGTGTGTGTGTGT	GTGTGTGT	.	.	END=6519575;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.935555:4,4:4-5,4-5:8,24,0,0:4,8:NULL:254.948:366.612,131.36:0.469019,0.469019:1.0,0.0,0.0	0/0:24:0.999881:9,9:9-9,9-9:17,6,0,0:9,17:NULL:122.476:326.675,113.385:0.139319,0.139319:8.45691e-32,6.95839e-05,0.999933
-chr1	6520061	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAAC	.	.	END=6520095;RU=aaaac;PERIOD=5;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:40:0.348329:5,7:5-5,5-8:22,10,0,8:5,22:3,3|5,1|7,4:251.551:366.612,131.36:0.0,0.516183:1.00958e-24,1.0,0.0	0/0:40:1.0:7,7:7-7,7-7:20,11,0,8:7,20:2,1|3,3|4,1|5,2|6,1:237.78:326.675,113.385:0.139319,0.139319:0.0,4.5035e-06,0.999995
-chr1	6520115	.	AACCAACCAACC	.	.	.	END=6520126;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.842359:3,3:3-3,3-3:6,9,0,0:3,6:NULL:104.041:366.612,131.36:0.0,0.0:8.02858e-22,0.0840801,0.916017	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:172.892:326.675,113.385:0.0,0.0:0.0,5.40295e-07,1.0
-chr1	6525229	.	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAAC	.	.	END=6525264;RU=aaac;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.0:7,7:7-7,7-7:27,13,0,4:7,27:3,1|6,3:259.229:366.612,131.36:0.0,0.0:1.0,2.10771e-08,0.0	0/0:41:1.0:9,9:9-9,9-9:19,15,0,7:9,19:3,1|4,2|5,1|6,1|8,2:266.151:326.675,113.385:0.0,0.0:0.0,8.39e-06,0.999994
-chr1	6525468	.	TGTGTGTGTGTGTGTG	.	.	.	END=6525483;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999729:8,8:8-8,8-8:15,20,0,5:8,15:6,4|7,1:286.139:366.612,131.36:0.0990099,0.0990099:4.7596e-28,0.000115341,0.999887	0/0:43:0.994747:8,8:7-8,7-8:29,10,0,4:7,4|8,25:4,1|5,2|7,1:253.989:326.675,113.385:0.419363,0.419363:4.07905e-40,0.00526366,0.994747
-chr1	6530019	.	AATTAATTAATT	.	.	.	END=6530030;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.92595:3,3:3-3,3-3:7,21,0,0:3,7:NULL:218.027:366.612,131.36:0.0,0.0:4.4995e-23,0.050793,0.949288	0/0:14:0.932457:3,3:3-3,3-3:7,7,0,0:3,7:NULL:92.1075:326.675,113.385:0.0,0.0:3.16866e-23,0.0352042,0.96486
-chr1	6540303	.	CAAAAACAAAAACAAAAA	.	.	.	END=6540320;RU=caaaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:23,19,0,3:3,23:2,3:280.557:366.612,131.36:0.0,0.0:0.0,2.94168e-07,1.0	0/0:30:1.00001:3,3:3-3,3-3:22,8,0,0:3,22:NULL:160.404:326.675,113.385:0.0,0.0:0.0,1.50693e-06,1.0
-chr1	6542023	.	GTTTTGTTTTGTTTT	GTTTT	.	.	END=6542037;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0706208:1,1:1-4,1-4:0,12,0,0:NULL:NULL:111.332:366.612,131.36:1.20962,1.20962:0.24805,0.510238,0.241734	0/0:21:0.999747:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.451:326.675,113.385:0.0,0.0:0.0,0.000141988,0.999858
-chr1	6542152	.	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	.	.	END=6542199;RU=ttcc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:39:0.998437:11,12:11-11,9-12:7,20,0,12:11,5|12,2:2,1|3,2|4,2|5,4|6,2|8,1:306.906:366.612,131.36:0.0,0.705267:0.00121235,0.998792,2.93932e-09	0/0:21:0.996639:12,12:11-12,11-12:12,4,0,4:12,12:6,2|7,1|10,1:118.65:326.675,113.385:0.390807,0.390807:3.18866e-31,0.00190421,0.998102
-chr1	6549122	.	TATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATA	.	.	END=6549165;RU=ta;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:17:0.17645:19,19:17-19,17-19:2,11,0,4:19,2:4,1|5,1|8,1|17,1:144.179:366.612,131.36:0.542842,0.542842:0.871083,0.128396,0.000618529	1/3:11:0.028408:1,21:1-23,1-23:0,9,0,2:NULL:17,1|21,1:99.7489:326.675,113.385:8.54168,5.05515:0.263481,0.69884,0.0377403
-chr1	6555095	.	GTTGTTGTTGTT	.	.	.	END=6555106;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:24,20,0,0:4,24:NULL:282.923:366.612,131.36:0.0,0.0:0.0,1.12807e-06,1.0	0/0:43:1.0:4,4:4-4,4-4:30,11,0,2:4,30:3,2:230.61:326.675,113.385:0.0,0.0:0.0,4.15857e-09,1.0
-chr1	6557207	.	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	.	.	END=6557281;RU=ttc;PERIOD=3;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.0444653:28,28:1-28,1-28:0,13,0,8:NULL:6,1|11,1|14,1|16,1|24,1|25,1|27,2:178.898:366.612,131.36:6.79896,6.79896:2.57014e-23,0.496631,0.503384	0/0:28:0.676758:25,25:25-25,25-25:5,7,0,16:25,5:3,2|4,1|9,1|10,1|12,1|14,3|15,1|16,1|17,2|20,1|22,1|23,1:208.385:326.675,113.385:0.0,0.0:2.55374e-08,0.150502,0.849579
-chr1	6558796	.	GGGTGGGTGGGT	.	.	.	END=6558807;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992568:3,3:3-3,3-3:10,12,0,0:3,10:NULL:147.84:366.612,131.36:0.0,0.0:1.03052e-29,0.00436478,0.995644	0/0:26:0.982124:3,3:3-3,3-3:9,17,0,0:3,9:NULL:193.248:326.675,113.385:0.0,0.0:1.17708e-26,0.0114446,0.988582
-chr1	6573728	.	TGTTTGTTTGTTTGTT	.	.	.	END=6573743;RU=tgtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:29,14,0,0:4,29:NULL:246.303:366.612,131.36:0.0,0.0:0.0,1.95774e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:24,8,0,0:4,24:NULL:166.086:326.675,113.385:0.0,0.0:0.0,4.58797e-07,1.0
-chr1	6574488	.	TATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=6574515;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.999898:9,9:9-9,9-9:16,11,0,3:9,16:7,1|8,2:194.239:366.612,131.36:0.0990099,0.0990099:0.0,9.4853e-06,0.999993	0/0:30:0.999572:7,7:7-7,7-7:14,9,0,7:7,14:2,1|3,2|5,2|6,2:187.963:326.675,113.385:0.0,0.0:1.16039e-33,0.000195257,0.999805
-chr1	6575450	.	TTTATTTATTTATTTA	.	.	.	END=6575465;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:26,8,0,0:4,26:NULL:175.847:366.612,131.36:0.0,0.0:0.0,1.47876e-07,1.0	0/0:29:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:151.885:326.675,113.385:0.0,0.0:0.0,2.16543e-06,1.0
-chr1	6579057	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT	.	.	END=6579090;RU=gt;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:1.0:10,10:10-10,10-10:32,16,0,4:9,2|10,30:5,1|8,1|9,2:311.614:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:40:0.952174:17,17:16-18,16-18:15,12,0,12:16,3|17,12:5,1|9,1|10,1|11,2|12,2|14,1|15,3|16,1:284.142:326.675,113.385:0.382183,0.382183:4.47207e-14,0.0474327,0.952644
-chr1	6581899	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6581934;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.0409144:18,18:16-19,16-19:0,5,0,7:NULL:5,2|8,1|14,1|15,1|16,1|17,1:102.022:366.612,131.36:2.04575,2.04575:0.143728,0.552506,0.303883	1/0:23:0.741081:17,18:16-18,16-18:4,10,0,8:17,2|18,2:5,1|11,2|13,2|14,1|16,1|17,1:178.74:326.675,113.385:0.5634,0.711908:0.0240193,0.808404,0.167687
-chr1	6582216	.	TTTTGTTTTGTTTTG	.	.	.	END=6582230;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999709:3,3:3-3,3-3:15,6,0,0:3,15:NULL:115.111:366.612,131.36:0.0,0.0:0.0,0.000175043,0.999827	0/0:24:0.999727:3,3:3-3,3-3:15,9,0,0:3,15:NULL:141.616:326.675,113.385:0.0,0.0:0.0,0.000159982,0.999842
-chr1	6589837	.	AATGAATGAATG	.	.	.	END=6589848;RU=aatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:2-3,2-3:25,7,0,0:3,25:NULL:162.414:366.612,131.36:0.169767,0.169767:0.0,1.1825e-07,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:210.49:326.675,113.385:0.0,0.0:0.0,2.6585e-06,1.0
-chr1	6589908	.	AGTCAGTCAGTC	.	.	.	END=6589919;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999868:3,3:3-3,3-3:16,17,0,0:3,16:NULL:212.311:366.612,131.36:0.0,0.0:0.0,7.16104e-05,0.999932	0/0:45:1.0:3,3:3-3,3-3:22,21,0,2:3,22:2,2:286.925:326.675,113.385:0.0,0.0:0.0,6.81537e-07,1.0
-chr1	6591632	.	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT	.	.	END=6591681;RU=ttcct;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:20:1.0:7,10:7-7,10-10:9,7,0,4:7,5|10,4:3,2|5,1|6,1:133.243:366.612,131.36:0.29703,0.0:8.67611e-10,1.0,2.09003e-09	0/0:28:0.970062:10,10:10-10,10-10:8,10,0,10:10,8:2,1|4,1|5,1|6,3|7,2|8,1|10,1:193.083:326.675,113.385:0.0,0.0:1.12305e-28,0.0144447,0.985586
-chr1	6591950	.	TCCTTTCCTTTCCTTTCCTT	.	.	.	END=6591969;RU=tcctt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.576692:4,4:4-4,4-4:4,2,0,0:4,4:NULL:32.3285:366.612,131.36:0.29703,0.29703:1.45405e-12,0.214419,0.785623	0/0:26:1.00001:4,4:4-4,4-4:23,1,0,2:4,23:2,1|3,1:113.988:326.675,113.385:0.0,0.0:0.0,4.22388e-07,1.0
-chr1	6598126	.	TGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=6598147;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999831:11,11:11-11,11-11:17,12,0,2:11,17:6,1|8,1:193.141:366.612,131.36:0.0,0.0:6.30627e-27,0.000104113,0.999896	0/0:32:0.99526:11,11:10-11,10-11:17,12,0,3:10,2|11,15:6,1|7,1|8,1:215.682:326.675,113.385:0.195027,0.195027:7.28222e-22,0.00466829,0.995342
-chr1	6601383	.	TGTGTGTGTGTG	.	.	.	END=6601394;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999591:6,6:5-6,5-6:15,18,0,0:6,15:NULL:219.972:366.612,131.36:0.437216,0.437216:4.48063e-35,0.000300498,0.999704	0/0:34:1.00001:6,6:6-6,6-6:22,7,0,5:6,22:5,5:192.526:326.675,113.385:0.0,0.0:0.0,6.67475e-07,1.0
-chr1	6601485	.	AGGGAGGGAGGG	.	.	.	END=6601496;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:23,10,0,0:3,23:NULL:177.924:366.612,131.36:0.0,0.0:0.0,5.48719e-07,1.0	0/0:45:1.0:3,3:3-3,3-3:27,16,0,2:3,27:2,2:260.68:326.675,113.385:0.0,0.0:0.0,2.88615e-08,1.0
-chr1	6602519	.	TTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTATTA	.	.	END=6602545;RU=tta;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0356188:12,12:1-12,1-12:0,9,0,5:NULL:4,1|5,1|6,1|10,1|11,1:119.866:366.612,131.36:3.31696,3.31696:1.68215e-15,0.498435,0.501573	0/0:28:0.50064:9,9:8-9,8-9:15,8,0,5:8,3|9,12:3,1|5,1|6,1|7,1|8,1:177.338:326.675,113.385:0.472558,0.472558:4.96969e-19,0.499154,0.500847
-chr1	6626511	.	ACCCACCCACCC	.	.	.	END=6626522;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999187:3,3:3-3,3-3:13,19,0,0:3,13:NULL:223.009:366.612,131.36:0.0,0.0:4.387e-42,0.000474992,0.999529	0/0:51:1.00001:3,3:3-3,3-3:22,29,0,0:3,22:NULL:342.245:326.675,113.385:0.0,0.0:0.0,2.41659e-06,1.0
-chr1	6633217	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6633244;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.878848:15,15:13-16,13-16:17,19,0,12:13,2|15,12|16,3:5,3|6,4|9,1|10,1|14,3:359.766:366.612,131.36:0.751302,0.751302:1.4e-44,0.00210048,0.997905	0/0:51:1.0:14,14:14-14,14-14:26,16,0,9:14,26:5,1|6,1|7,2|8,2|9,1|10,1|13,1:333.577:326.675,113.385:0.0,0.0:5.2809e-28,3.76402e-07,1.0
-chr1	6635223	.	AGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6635246;RU=agga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.868967:12,12:9-12,9-12:8,29,0,12:12,8:4,3|6,2|7,2|8,1|9,3|10,1:399.905:366.612,131.36:0.727436,0.727436:0.0,0.0,1.0	0/0:50:1.0:6,6:6-6,6-6:22,23,0,5:6,22:3,2|4,1|5,2:338.493:326.675,113.385:0.0,0.0:0.0,1.79946e-06,1.0
-chr1	6637761	.	AAAACAAAACAAAAC	.	.	.	END=6637775;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:189.748:366.612,131.36:0.0,0.0:0.0,2.94786e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:19,9,0,2:3,19:2,1|3,1:177.292:326.675,113.385:0.0,0.0:0.0,4.63746e-06,0.999995
-chr1	6639022	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=6639049;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:54:0.99161:16,17:16-16,16-17:18,28,0,8:15,2|16,14|17,2:5,2|6,2|7,1|9,1|11,1|17,1:407.064:366.612,131.36:0.0,0.437216:2.0971e-39,2.13905e-10,1.0	0/0:77:0.981574:14,14:13-14,13-14:24,35,0,16:13,5|14,19:5,3|7,1|8,3|9,1|10,4|12,2|13,2:555.047:326.675,113.385:0.345543,0.345543:3.88947e-19,0.0184703,0.98157
-chr1	6650989	.	ACACACACACACACACAC	.	.	.	END=6651006;RU=ac;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:9,9:9-9,9-9:20,20,0,7:9,20:5,1|7,2|8,4:316.391:366.612,131.36:0.0990099,0.0990099:1.13195e-34,6.36215e-06,0.999994	0/0:38:0.999539:9,9:8-9,8-9:20,9,0,8:8,2|9,18:6,1|7,1|8,5|9,1:235.415:326.675,113.385:0.294378,0.294378:9.34017e-37,0.000476681,0.999523
-chr1	6652069	.	AATAAATAAATAAATAAATAAATAAATAAATA	AATAAATAAATAAATAAATAAATAAATA,AATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	END=6652100;RU=aata;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.99999:7,9:7-7,7-9:21,13,0,2:7,15|8,2|9,4:5,1|8,1:250.151:366.612,131.36:0.0,0.45372:1.27709e-14,1.0,2.06024e-20	0/0:37:1.0:8,8:8-8,8-8:24,9,0,4:8,24:4,1|7,3:214.106:326.675,113.385:0.0,0.0:0.0,1.95385e-07,1.0
-chr1	6653054	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=6653073;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.00001:6,6:6-6,6-6:21,18,0,6:6,21:2,1|4,2|5,3:290.798:366.612,131.36:0.0,0.0:0.0,3.94884e-07,1.0	0/0:52:1.0:5,5:4-5,4-5:27,19,0,5:5,27:3,2|4,3:316.099:326.675,113.385:0.169767,0.169767:0.0,2.97714e-08,1.0
-chr1	6660614	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6660633;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999553:5,5:5-5,5-5:14,13,0,2:5,14:2,1|3,1:191.696:366.612,131.36:0.0,0.0:0.0,0.00022762,0.999774	0/0:29:0.999755:5,5:5-5,5-5:15,12,0,2:5,15:3,2:181.981:326.675,113.385:0.0,0.0:0.0,0.000150829,0.99985
-chr1	6661173	.	GTTTTGTTTTGTTTT	GTTTTGTTTTGTTTTGTTTT	.	.	END=6661187;RU=gtttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.995835:4,4:4-4,4-4:12,8,0,0:4,12:NULL:121.767:366.612,131.36:0.0,0.0:0.0,0.00236118,0.997647	0/0:32:1.00001:3,3:3-3,3-3:20,10,0,2:3,20:2,2:183.986:326.675,113.385:0.0,0.0:0.0,3.33869e-06,1.0
-chr1	6662622	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6662661;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.997073:16,16:16-16,16-16:13,3,0,0:16,13:NULL:80.8523:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/2:42:0.286442:20,25:20-20,12-26:15,9,0,16:19,2|20,13:5,1|6,1|10,1|11,2|12,1|13,1|14,1|15,3|16,2|19,1|23,1|25,1:288.356:326.675,113.385:0.0,4.65993:6.93767e-25,5.20978e-13,1.0
-chr1	6663558	.	CTGCTGCTGCTG	.	.	.	END=6663569;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:6:0.577703:4,4:4-4,4-4:4,2,0,0:4,4:NULL:35.0695:366.612,131.36:0.0,0.0:2.88725e-11,0.234658,0.765367	0/0:63:1.0:4,4:4-4,4-4:34,27,0,2:4,34:3,2:402.862:326.675,113.385:0.0,0.0:0.0,3.71134e-10,1.0
-chr1	6664650	.	TATGTATGTATG	TATG	.	.	END=6664661;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:144.866:326.675,113.385:0.0,0.0:0.0,4.62343e-07,1.0
-chr1	6666335	.	TCCCTCCCTCCC	.	.	.	END=6666346;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:244.895:366.612,131.36:0.0,0.0:0.0,1.21091e-07,1.0	0/0:54:1.0:3,3:3-3,3-3:29,22,0,3:3,29:2,3:335.04:326.675,113.385:0.0,0.0:0.0,7.12479e-09,1.0
-chr1	6666349	.	TCTTTCTTTCTT	.	.	.	END=6666360;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00002:3,3:3-8,3-8:20,15,0,0:3,20:NULL:215.496:366.612,131.36:2.46433,2.46433:0.0,7.47024e-06,0.999994	0/0:51:1.0:3,3:3-3,3-3:32,19,0,0:3,32:NULL:300.283:326.675,113.385:0.0,0.0:0.0,1.5381e-09,1.0
-chr1	6666375	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6666390;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.996825:17,18:17-17,15-18:12,14,0,9:17,10|18,2:9,2|10,1|14,1|15,2|16,1|17,1|18,1:263.472:366.612,131.36:0.19802,0.8516:0.0,0.0,1.0	0/0:51:1.0:8,8:8-8,8-8:26,19,0,5:8,26:4,1|6,2|7,2:317.137:326.675,113.385:0.0,0.0:2.8061e-41,8.445e-08,1.0
-chr1	6671371	.	AAGAAAGAAAGAAAGA	.	.	.	END=6671386;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999854:4,4:3-4,3-4:16,13,0,0:4,16:NULL:181.48:366.612,131.36:0.236383,0.236383:0.0,0.00011318,0.999888	0/0:22:0.998983:4,4:4-4,4-4:14,8,0,0:4,14:NULL:134.801:326.675,113.385:0.0,0.0:2.455e-42,0.000664496,0.999339
-chr1	6673316	.	AAACAAACAAAC	.	.	.	END=6673327;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999999:3,3:3-3,3-3:19,6,0,0:3,19:NULL:126.548:366.612,131.36:0.0,0.0:0.0,9.74928e-06,0.999993	0/0:52:1.0:3,3:3-3,3-3:31,21,0,0:3,31:NULL:317.693:326.675,113.385:0.0,0.0:0.0,1.1136e-08,1.0
-chr1	6674435	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=6674462;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.316825:16,16:14-16,14-16:12,15,0,0:14,2|15,2|16,8:NULL:198.567:366.612,131.36:0.840244,0.840244:8.33851e-25,0.0022144,0.997791	0/0:54:0.993236:14,14:13-14,13-14:26,23,0,5:13,6|14,20:5,3|6,2:376.116:326.675,113.385:0.323567,0.323567:4.66391e-23,0.00678172,0.993234
-chr1	6680517	.	TGGGTGGGTGGG	.	.	.	END=6680528;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:189.462:366.612,131.36:0.0,0.0:0.0,3.00271e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:263.257:326.675,113.385:0.0,0.0:0.0,3.35788e-07,1.0
-chr1	6684271	.	ACAAACAAACAAACAA	.	.	.	END=6684286;RU=acaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:228.612:366.612,131.36:0.0,0.0:0.0,5.85672e-06,0.999995	0/0:33:0.999992:4,4:4-4,4-4:18,9,0,6:4,18:3,6:196.145:326.675,113.385:0.0,0.0:0.0,1.14496e-05,0.999988
-chr1	6690576	.	TATATATATATA	.	.	.	END=6690587;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.975685:6,6:6-6,6-6:9,0,0,0:6,9:NULL:35.4976:366.612,131.36:0.0,0.0:3.9678e-15,0.0124883,0.987536	0/0:21:0.999204:6,6:6-6,6-6:14,7,0,0:6,14:NULL:125.106:326.675,113.385:0.0,0.0:7.2177e-23,0.000535469,0.999469
-chr1	6703494	.	TATATATATATATATATATATATATATA	TATATATATATATATATATATATATA	.	.	END=6703521;RU=ta;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.968492:13,13:13-13,13-13:9,9,0,3:13,9:8,1|10,1|13,1:146.856:366.612,131.36:0.139319,0.139319:0.982443,0.0175961,1.6944e-08	0/0:10:0.479794:14,14:14-14,14-14:4,6,0,0:14,4:NULL:71.5921:326.675,113.385:0.417958,0.417958:0.00029151,0.284597,0.715118
-chr1	6711923	.	CAAACAAACAAACAAA	.	.	.	END=6711938;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999782:4,4:4-4,4-4:15,22,0,2:4,15:2,1|3,1:285.144:366.612,131.36:0.0,0.0:2.09e-43,0.000166085,0.999835	0/0:36:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:181.384:326.675,113.385:0.0,0.0:0.0,3.89179e-08,1.0
-chr1	6713866	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6713917;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.221703:14,14:10-14,10-14:3,15,0,0:14,3:NULL:153.06:366.612,131.36:1.2177,1.2177:1.0,0.0,0.0	0/2:43:0.987703:26,27:21-26,21-28:13,15,0,12:25,2|26,9|27,2:5,1|6,1|13,2|14,1|15,1|21,1|23,3|24,1|27,1:300.289:326.675,113.385:0.973827,1.47541:6.51093e-19,1.9854e-05,0.99998
-chr1	6713993	.	TGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6714004;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.221145:6,6:3-6,3-6:2,13,0,0:6,2:NULL:129.107:366.612,131.36:0.991188,0.991188:6.73945e-05,0.532693,0.467348	0/1:62:0.284611:6,18:6-6,6-21:43,16,0,3:6,43:11,1|13,1|18,1:369.866:326.675,113.385:0.0,5.2541:0.0,5.92463e-21,1.0
-chr1	6716659	.	TTTCTTTCTTTC	.	.	.	END=6716670;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999993:3,3:3-3,3-3:18,20,0,2:3,18:2,2:265.082:366.612,131.36:0.0,0.0:0.0,1.79637e-05,0.999985	0/0:47:1.0:3,3:3-3,3-3:31,11,0,5:3,31:2,5:260.567:326.675,113.385:0.0,0.0:0.0,1.18079e-09,1.0
-chr1	6720277	.	ACATACATACAT	.	.	.	END=6720288;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:26,18,0,0:3,26:NULL:268.077:366.612,131.36:0.0,0.0:0.0,9.24506e-08,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.205:326.675,113.385:0.0,0.0:0.0,1.36787e-06,1.0
-chr1	6721062	.	CACACACACACA	.	.	.	END=6721073;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:19,12,0,6:6,19:4,1|5,5:235.048:366.612,131.36:0.0,0.0:8.662e-41,4.90018e-06,0.999995	0/0:34:0.999993:6,6:6-6,6-6:19,15,0,0:6,19:NULL:208.771:326.675,113.385:0.0,0.0:8.8628e-41,1.658e-05,0.999986
-chr1	6721105	.	TTTTGTTTTGTTTTG	.	.	.	END=6721119;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:25,11,0,0:3,25:NULL:198.723:366.612,131.36:0.0,0.0:0.0,1.695e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:32,6,0,3:3,32:2,3:204.171:326.675,113.385:0.0,0.0:0.0,5.65962e-10,1.0
-chr1	6722604	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=6722663;RU=ttttg;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.998215:8,8:8-8,8-8:12,17,0,8:8,12:2,1|4,2|5,1|6,1|7,3:260.566:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:46:0.999287:12,12:12-12,12-12:13,15,0,18:12,13:3,1|4,2|5,4|6,1|7,1|8,3|9,2|11,4:320.81:326.675,113.385:0.0,0.0:1.50531e-38,0.000313811,0.999689
-chr1	6723584	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6723621;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:36:0.99981:19,23:19-23,23-24:7,16,0,11:19,3|23,4:4,1|6,1|13,3|15,1|17,2|18,1|22,2:268.49:366.612,131.36:1.01068,0.195027:2.2591e-26,0.000132187,0.999871	1/0:39:0.994947:18,19:18-20,19-19:14,11,0,13:18,4|19,10:6,1|8,1|9,2|10,2|14,2|15,2|16,2|18,1:273.883:326.675,113.385:0.540307,0.0:1.55211e-10,0.99495,0.0050625
-chr1	6728597	.	TTTCTTTCTTTC	.	.	.	END=6728608;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999538:3,3:3-3,3-3:14,9,0,0:3,14:NULL:133.683:366.612,131.36:0.0,0.0:0.0,0.000243385,0.999758	0/0:34:1.0:3,3:3-3,3-3:27,5,0,2:3,27:2,2:166.45:326.675,113.385:0.0,0.0:0.0,2.15002e-08,1.0
-chr1	6730348	.	TGGGTGGGTGGGTGGG	.	.	.	END=6730363;RU=tggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999531:4,4:4-4,4-4:15,27,0,0:4,15:NULL:301.947:366.612,131.36:0.0,0.0:0.0,0.000389541,0.999613	0/0:47:0.999845:4,4:4-4,4-4:16,29,0,2:4,16:3,2:341.888:326.675,113.385:0.0,0.0:0.0,0.000106812,0.999895
-chr1	6730422	.	TGCTTTGCTTTGCTT	.	.	.	END=6730436;RU=tgctt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:33,20,0,0:3,33:NULL:310.714:366.612,131.36:0.0,0.0:0.0,7.62851e-10,1.0	0/0:69:1.0:3,3:3-3,3-3:54,10,0,5:3,54:2,5:341.071:326.675,113.385:0.0,0.0:0.0,1.7461e-16,1.0
-chr1	6734369	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=6734401;RU=ttg;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.980074:15,15:14-15,14-15:15,13,0,18:14,2|15,13:5,1|7,2|8,1|9,4|11,2|12,2|13,1|14,4|15,1:325.514:366.612,131.36:0.334882,0.334882:0.0,0.0,1.0	0/0:50:1.00001:11,11:11-11,11-11:20,16,0,14:11,20:3,1|4,1|5,2|6,2|7,2|8,1|9,2|10,3:341.701:326.675,113.385:0.0,0.0:3.28e-43,3.46465e-06,1.0
-chr1	6735467	.	AATCAATCAATC	.	.	.	END=6735478;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:3,3:2-3,2-3:20,8,0,0:3,20:NULL:153.232:366.612,131.36:0.36513,0.36513:0.0,3.69551e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:218.448:326.675,113.385:0.0,0.0:0.0,5.86043e-06,0.999995
-chr1	6736982	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6737025;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.609566:19,20:19-19,19-20:8,10,0,13:19,8:5,2|7,2|9,1|10,1|11,1|14,2|17,1|18,2|20,1:236.394:366.612,131.36:0.0,0.40582:0.75266,0.24735,4.34393e-15	0/0:43:0.903804:22,22:21-23,21-23:16,12,0,14:21,3|22,11|23,2:6,1|7,1|8,1|9,1|10,3|11,1|15,1|19,1|20,2|22,2:305.424:326.675,113.385:0.559734,0.559734:1.7949e-27,0.00514933,0.994866
-chr1	6740766	.	GTTTGTTTGTTTGTTT	.	.	.	END=6740781;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999991:4,4:4-4,4-4:19,15,0,2:4,19:3,2:228.062:366.612,131.36:0.0,0.0:0.0,1.52551e-05,0.999986	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:228.081:326.675,113.385:0.0,0.0:0.0,4.35477e-07,1.0
-chr1	6745472	.	TGTTTGTTTGTTTGTTTGTTTGTT	.	.	.	END=6745495;RU=tgtt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.975726:6,6:5-6,5-6:19,23,0,9:5,2|6,17:2,2|3,2|4,1|5,4:362.099:366.612,131.36:0.419363,0.419363:0.0,0.0243312,0.975718	0/0:36:1.00001:6,6:3-6,3-6:21,8,0,6:6,21:2,1|3,1|4,2|5,2:198.513:326.675,113.385:0.934582,0.934582:0.0,1.88575e-06,1.0
-chr1	6748758	.	AAACAAACAAACAAAC	.	.	.	END=6748773;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:4,4:4-4,4-4:21,16,0,0:4,21:NULL:228.863:366.612,131.36:0.0,0.0:0.0,3.67721e-06,1.0	0/0:45:1.0:4,4:4-4,4-4:26,13,0,6:4,26:2,1|3,5:263.236:326.675,113.385:0.0,0.0:0.0,4.99948e-08,1.0
-chr1	6749336	.	GTTTGTTTGTTT	.	.	.	END=6749347;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.995381:3,3:3-3,3-3:11,10,0,0:3,11:NULL:133.595:366.612,131.36:0.0,0.0:6.29787e-37,0.00205199,0.997952	0/0:21:0.999856:3,3:3-3,3-3:16,5,0,0:3,16:NULL:109.32:326.675,113.385:0.0,0.0:0.0,6.8238e-05,0.999933
-chr1	6751150	.	AAAAGAAAAGAAAAG	AAAAG	.	.	END=6751164;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.108428:1,1:1-2,1-2:0,18,0,0:NULL:NULL:174.121:366.612,131.36:0.536301,0.536301:0.385972,0.49367,0.120449	0/0:35:1.0:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.154:326.675,113.385:0.0,0.0:0.0,9.84342e-06,0.999993
-chr1	6752073	.	TATCTATCTATC	.	.	.	END=6752084;RU=tatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:2-3,2-3:30,27,0,2:3,30:2,2:374.491:366.612,131.36:0.236383,0.236383:0.0,5.52036e-09,1.0	0/0:41:1.0:3,3:3-3,3-3:27,12,0,2:3,27:2,2:228.917:326.675,113.385:0.0,0.0:0.0,2.1434e-08,1.0
-chr1	6752139	.	TTGTTGTTGTTG	.	.	.	END=6752150;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:32,23,0,0:4,32:NULL:334.176:366.612,131.36:0.0,0.0:0.0,4.61281e-09,1.0	0/0:39:1.00001:4,4:4-4,4-4:22,14,0,3:4,22:3,3:234.628:326.675,113.385:0.0,0.0:0.0,7.82498e-07,1.0
-chr1	6752213	.	AAACAAACAAAC	.	.	.	END=6752224;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:261.678:366.612,131.36:0.0,0.0:0.0,2.98266e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:27,11,0,2:3,27:2,2:222.519:326.675,113.385:0.0,0.0:0.0,2.70935e-08,1.0
-chr1	6754429	.	TTTGTTTTGTTTTGT	TTTGT	.	.	END=6754443;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0942719:1,1:1-3,1-3:0,14,0,0:NULL:NULL:133.774:366.612,131.36:0.8516,0.8516:0.236528,0.507018,0.256493	0/0:30:0.999998:3,3:3-3,3-3:18,9,0,3:3,18:2,3:174.936:326.675,113.385:0.0,0.0:0.0,9.15557e-06,0.999993
-chr1	6756494	.	TATATATATATATA	TATATATATATA	.	.	END=6756507;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.992278:6,6:6-7,6-7:11,7,0,0:6,11:NULL:106.224:366.612,131.36:0.382696,0.382696:0.996059,0.00394922,1.14248e-24	0/0:21:0.991242:7,7:7-7,7-7:11,10,0,0:7,11:NULL:132.924:326.675,113.385:0.0,0.0:1.14522e-19,0.00589292,0.994121
-chr1	6762157	.	CTTTCTTTCTTT	.	.	.	END=6762168;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.99973:3,3:3-3,3-3:15,6,0,0:3,15:NULL:115.032:366.612,131.36:0.0,0.0:0.0,0.000133363,0.999871	0/0:14:0.979383:3,3:3-3,3-3:9,5,0,0:3,9:NULL:84.5507:326.675,113.385:0.0,0.0:2.28729e-30,0.010148,0.989873
-chr1	6765667	.	TGTTTGTTTGTTTGTTTGTT	.	.	.	END=6765686;RU=tgtt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:5,5:5-5,5-5:20,6,0,4:5,20:3,1|4,3:164.803:366.612,131.36:0.0,0.0:0.0,3.0411e-06,1.0	0/0:41:1.0:5,5:5-5,5-5:25,14,0,2:5,25:3,2:246.049:326.675,113.385:0.0,0.0:0.0,1.92216e-07,1.0
-chr1	6766469	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6766494;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.8163:20,20:18-23,18-23:7,16,0,8:20,7:8,1|10,1|13,2|14,1|16,1|18,1|19,1:243.529:366.612,131.36:1.7276,1.7276:0.0,0.0,1.0	0/0:44:0.997988:13,13:13-13,13-13:18,15,0,11:12,2|13,16:4,1|5,1|6,1|9,3|10,2|11,2|12,1:301.827:326.675,113.385:0.139319,0.139319:3.51002e-17,0.00196364,0.998042
-chr1	6766823	.	AAAAGAAAAGAAAAG	.	.	.	END=6766837;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999829:3,3:3-3,3-3:16,10,0,0:3,16:NULL:159.17:366.612,131.36:0.0,0.0:0.0,0.000110301,0.999894	0/0:28:0.999828:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.407:326.675,113.385:0.0,0.0:0.0,0.000120073,0.99988
-chr1	6772439	.	GGGTGGGTGGGT	.	.	.	END=6772450;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.568148:3,3:2-3,2-3:4,25,0,2:3,4:2,2:265.765:366.612,131.36:0.195027,0.195027:2.67462e-12,0.259457,0.740549	0/0:30:0.999152:3,3:3-3,3-3:14,16,0,0:3,14:NULL:197.744:326.675,113.385:0.0,0.0:7.51e-43,0.000631579,0.99937
-chr1	6777440	.	AAGAAGAAGAAG	.	.	.	END=6777451;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:24,10,0,0:4,24:NULL:188.867:366.612,131.36:0.0,0.0:0.0,4.41209e-07,1.0	0/0:38:1.0:4,4:4-4,4-4:25,11,0,2:4,25:3,2:210.852:326.675,113.385:0.0,0.0:0.0,1.09758e-07,1.0
-chr1	6782984	.	AAGAAGAAGAAG	.	.	.	END=6782995;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-5,4-5:25,11,0,0:4,25:NULL:198.879:366.612,131.36:0.311527,0.311527:0.0,3.56499e-07,1.0	0/0:44:1.0:4,4:3-4,3-4:24,19,0,0:4,24:NULL:268.718:326.675,113.385:0.270063,0.270063:0.0,6.42206e-07,1.0
-chr1	6784915	.	ACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6784950;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.538962:26,26:26-26,26-26:4,17,0,15:26,4:7,1|8,1|9,2|11,2|13,2|15,2|16,1|20,2|22,1|23,1:298.207:366.612,131.36:0.0990099,0.0990099:0.0,0.0,1.0	0/0:45:0.971275:18,18:16-18,16-18:10,21,0,12:18,10:5,1|7,2|9,1|10,2|11,1|12,1|14,2|15,2:331.534:326.675,113.385:0.480581,0.480581:1.27448e-12,0.0139845,0.986045
-chr1	6785690	.	TAAATAAATAAA	.	.	.	END=6785701;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:37,17,0,0:3,37:NULL:297.244:366.612,131.36:0.0,0.0:0.0,3.93083e-11,1.0	0/0:61:1.0:3,3:3-3,3-3:38,23,0,0:3,38:NULL:354.587:326.675,113.385:0.0,0.0:0.0,2.68286e-11,1.0
-chr1	6788409	.	TTTGTTTGTTTG	.	.	.	END=6788420;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:21,31,0,0:3,21:NULL:365.753:366.612,131.36:0.0,0.0:0.0,4.74914e-06,0.999995	0/0:47:1.0:3,3:3-3,3-3:32,13,0,2:3,32:2,2:259.589:326.675,113.385:0.0,0.0:0.0,7.9757e-10,1.0
-chr1	6790829	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=6790884;RU=tc;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.100914:21,21:16-23,16-23:2,19,0,5:21,2:7,2|10,1|11,1|20,1:227.266:366.612,131.36:2.87013,2.87013:1.0,0.0,0.0	0/2:28:0.784671:28,29:28-29,28-29:6,13,0,9:28,4|29,2:5,1|6,1|7,1|13,1|14,1|15,1|16,1|24,1|25,1:230.192:326.675,113.385:0.253975,0.44763:8.85426e-07,0.0276042,0.972453
-chr1	6790889	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6790928;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.695649:14,15:14-16,15-16:9,21,0,4:14,3|15,6:11,2|12,1|14,1:268.723:366.612,131.36:0.637827,0.169767:1.0,0.0,0.0	0/0:33:0.98747:20,20:20-21,20-21:11,13,0,7:20,11:6,1|9,1|10,2|12,1|13,1|18,1:228.719:326.675,113.385:0.294378,0.294378:1.13944e-13,0.00558371,0.994429
-chr1	6798413	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=6798460;RU=gata;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.649047:15,15:10-15,10-15:4,13,0,12:15,4:4,1|5,1|8,1|12,2|13,2|14,5:230.461:366.612,131.36:1.99337,1.99337:0.0,0.00268667,0.997321	0/0:32:0.992273:12,12:12-12,12-12:10,13,0,9:12,10:2,1|4,1|5,1|6,1|8,1|9,1|11,3:229.25:326.675,113.385:0.0,0.0:2.29615e-23,0.00432192,0.995689
-chr1	6801379	.	ACAAGACAAGACAAG	.	.	.	END=6801393;RU=acaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999695:3,3:3-3,3-3:14,10,0,0:3,14:NULL:150.4:366.612,131.36:0.0,0.0:0.0,0.00020878,0.999795	0/0:52:1.0:3,3:3-3,3-3:30,22,0,0:3,30:NULL:318.985:326.675,113.385:0.0,0.0:0.0,8.73404e-09,1.0
-chr1	6802048	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6802089;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.993973:15,15:15-15,15-15:12,19,0,8:15,12:5,1|6,1|8,1|9,1|10,1|12,1|14,2:285.784:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:43:0.961253:21,21:18-29,18-29:15,13,0,13:20,3|21,12:5,1|6,1|8,1|10,1|13,3|15,1|16,1|18,1|19,2|20,1:297.166:326.675,113.385:4.22868,4.22868:1.29016e-12,0.0378589,0.962208
-chr1	6804083	.	TGCTGCTGCTGCTGC	.	.	.	END=6804097;RU=tgc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999993:5,5:5-5,5-5:20,14,0,0:5,20:NULL:206.277:366.612,131.36:0.0,0.0:0.0,1.2538e-05,0.999987	0/0:39:1.0:5,5:5-5,5-5:29,10,0,0:5,29:NULL:204.217:326.675,113.385:0.0,0.0:0.0,1.42854e-08,1.0
-chr1	6806447	.	CATGCATGCATG	.	.	.	END=6806458;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:3,3:3-3,3-3:34,27,0,0:3,34:NULL:373.021:366.612,131.36:0.0,0.0:0.0,5.00038e-10,1.0	0/0:49:1.0:3,3:3-3,3-3:31,18,0,0:3,31:NULL:287.628:326.675,113.385:0.0,0.0:0.0,5.02911e-09,1.0
-chr1	6812486	.	AGCAAGCAAGCA	.	.	.	END=6812497;RU=agca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.99993:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.095:366.612,131.36:0.0,0.0:0.0,4.03126e-05,0.999963	0/0:30:0.999946:3,3:3-3,3-3:17,13,0,0:3,17:NULL:190.203:326.675,113.385:0.0,0.0:0.0,5.80473e-05,0.999942
-chr1	6829363	.	ACCCACCCACCC	.	.	.	END=6829374;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.916632:3,3:3-3,3-3:7,18,0,0:3,7:NULL:192.672:366.612,131.36:0.0,0.0:5.55052e-22,0.0621172,0.937973	0/0:43:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:284.469:326.675,113.385:0.0,0.0:0.0,4.73609e-06,0.999995
-chr1	6830436	.	ACACACACACAC	.	.	.	END=6830447;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999811:6,6:5-7,5-7:27,9,0,4:5,2|6,25:4,1|5,3:229.185:366.612,131.36:0.374933,0.374933:0.0,0.000191561,0.999811	0/0:37:0.998197:6,6:5-6,5-6:23,10,0,4:5,2|6,21:4,2|5,2:221.385:326.675,113.385:0.36513,0.36513:4.3e-44,0.00180941,0.998194
-chr1	6830470	.	GGAGGGAGGGAG	.	.	.	END=6830481;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,8,0,2:3,26:2,2:189.305:366.612,131.36:0.0,0.0:0.0,8.93492e-08,1.0	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:186.791:326.675,113.385:0.0,0.0:0.0,1.12599e-06,1.0
-chr1	6831326	.	AAGCAAGCAAGC	.	.	.	END=6831337;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.994923:3,3:3-3,3-3:11,23,0,0:3,11:NULL:260.069:366.612,131.36:0.0,0.0:6.69228e-35,0.0030612,0.99695	0/0:25:0.999973:3,3:3-3,3-3:18,7,0,0:3,18:NULL:136.979:326.675,113.385:0.0,0.0:0.0,2.05381e-05,0.99998
-chr1	6832131	.	ACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6832174;RU=ac;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:40:0.323942:22,39:22-22,22-40:13,13,0,13:21,4|22,9:5,1|9,1|10,2|12,1|17,2|18,1|20,2|22,1|25,1|39,1:295.33:366.612,131.36:0.0990099,7.11791:1.85089e-26,5.46776e-09,1.0	0/0:41:0.818535:22,22:22-23,22-23:15,12,0,14:21,2|22,11|23,2:4,1|5,1|6,1|9,1|10,1|11,1|12,1|13,1|15,3|16,1|18,1|20,1:293.524:326.675,113.385:0.469228,0.469228:1.8178e-13,0.00523002,0.994783
-chr1	6834875	.	CTTCTTCTTCTTCTT	.	.	.	END=6834889;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998465:5,5:4-5,4-5:14,15,0,0:5,14:NULL:196.131:366.612,131.36:0.36513,0.36513:5.05e-42,0.00124333,0.998762	0/0:41:1.0:5,5:5-5,5-5:24,17,0,0:5,24:NULL:253.329:326.675,113.385:0.0,0.0:0.0,8.6663e-07,1.0
-chr1	6842625	.	ATGGATGGATGG	.	.	.	END=6842636;RU=atgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:30,20,0,0:3,30:NULL:299.761:366.612,131.36:0.0,0.0:0.0,5.34059e-09,1.0	0/0:46:1.0:3,3:3-3,3-3:27,16,0,3:3,27:2,3:272.712:326.675,113.385:0.0,0.0:0.0,2.1608e-08,1.0
-chr1	6845815	.	TGTTGTTGTTGT	.	.	.	END=6845826;RU=tgt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:21,12,0,2:4,21:3,2:209.619:366.612,131.36:0.0,0.0:0.0,2.37087e-06,1.0	0/0:22:0.999669:4,4:4-4,4-4:15,7,0,0:4,15:NULL:125.168:326.675,113.385:0.0,0.0:0.0,0.00017801,0.999826
-chr1	6852419	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA,AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	.	.	END=6852478;RU=agga;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:56:0.991325:15,17:5-15,5-17:6,30,0,18:15,4|17,2:3,1|5,1|6,1|7,1|8,1|9,4|10,2|11,2|12,1|14,2|15,1|16,1:437.994:366.612,131.36:4.50067,5.02301:2.62865e-23,2.88987e-06,1.0	0/1:44:0.879306:15,16:15-15,15-16:12,20,0,12:15,9|16,3:3,1|5,1|6,1|7,1|9,2|11,2|12,2|13,1|15,1:332.587:326.675,113.385:0.0,0.484441:2.61894e-23,0.000296602,0.999705
-chr1	6852486	.	AGGCAGGCAGGC	.	.	.	END=6852497;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:25,28,0,0:3,25:NULL:350.825:366.612,131.36:0.0,0.0:0.0,3.01088e-07,1.0	0/0:43:1.0:3,3:3-3,3-3:31,12,0,0:3,31:NULL:228.067:326.675,113.385:0.0,0.0:0.0,2.71519e-09,1.0
-chr1	6855646	.	CAGCAGCAGCAGCAG	.	.	.	END=6855660;RU=cag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:28,15,0,0:5,28:NULL:240.107:366.612,131.36:0.0,0.0:0.0,3.39882e-08,1.0	0/0:35:1.0:5,5:5-5,5-5:24,11,0,0:5,24:NULL:195.661:326.675,113.385:0.0,0.0:0.0,4.6101e-07,1.0
-chr1	6856365	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6856396;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.168138:31,31:22-31,22-31:2,6,0,9:31,2:5,1|7,1|8,1|13,1|15,1|17,1|23,1|28,1|30,1:139.102:366.612,131.36:4.26,4.26:0.0,0.0,1.0	0/0:29:0.999082:16,16:16-16,16-16:20,5,0,4:15,3|16,17:5,1|10,1|11,1|15,1:165.745:326.675,113.385:0.0,0.0:2.09772e-20,0.000841373,0.999164
-chr1	6858278	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6858317;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:49:0.293981:17,27:17-17,16-29:13,16,0,19:16,4|17,9:5,2|6,1|8,3|9,1|10,3|11,1|12,2|13,1|15,3|16,1|26,1:375.164:366.612,131.36:0.139319,5.28021:0.000461757,0.999538,1.06857e-27	0/3:48:0.330157:20,36:20-20,19-36:20,12,0,16:19,5|20,13|21,2:4,1|5,1|8,1|9,2|11,1|12,2|14,1|15,1|16,3|17,1|18,1|36,1:357.236:326.675,113.385:0.0990099,8.00505:3.23109e-15,0.00236699,0.99764
-chr1	6862315	.	AAAATAAAATAAAAT	.	.	.	END=6862329;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999771:3,3:3-3,3-3:16,13,0,0:3,16:NULL:184.204:366.612,131.36:0.0,0.0:0.0,0.000148907,0.99985	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:238.178:326.675,113.385:0.0,0.0:0.0,2.03729e-07,1.0
-chr1	6864440	.	TTTGTTTGTTTG	.	.	.	END=6864451;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.9999:3,3:3-3,3-3:16,18,0,0:3,16:NULL:224.335:366.612,131.36:0.0,0.0:0.0,7.11331e-05,0.999932	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:161.012:326.675,113.385:0.0,0.0:0.0,2.86971e-07,1.0
-chr1	6865995	.	AAAGAAAAGAAAAGA	AAAGAAAAGA	.	.	END=6866009;RU=aaaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.999474:2,2:2-2,2-2:14,22,0,0:2,14:NULL:281.364:366.612,131.36:0.0,0.0:0.999782,0.000218486,1.0213e-41	0/0:28:0.997123:3,3:3-3,3-3:11,14,0,3:3,11:2,3:191.584:326.675,113.385:0.0,0.0:2.80918e-35,0.00147673,0.998527
-chr1	6868261	.	GTTTGTTTGTTT	.	.	.	END=6868272;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.99998:3,3:3-3,3-3:18,12,0,0:3,18:NULL:182.169:366.612,131.36:0.0,0.0:0.0,1.59765e-05,0.999986	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:254.657:326.675,113.385:0.0,0.0:0.0,6.79809e-08,1.0
-chr1	6869420	.	ATGTAGATGTAGATGTAGATGTAG	ATGTAGATGTAGATGTAG	.	.	END=6869443;RU=atgtag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:1.0:3,3:3-3,3-3:30,15,0,2:3,30:2,2:271.461:366.612,131.36:0.0,0.0:1.0,2.36335e-09,0.0	0/0:38:1.0:4,4:4-4,4-4:28,8,0,2:4,28:3,2:201.403:326.675,113.385:0.0,0.0:0.0,1.7602e-08,1.0
-chr1	6870752	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6870787;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:49:0.681137:25,25:24-26,24-26:5,22,0,20:25,5:4,2|8,1|9,2|11,2|14,1|15,1|16,1|19,2|20,3|22,1|23,3|24,1:385.769:366.612,131.36:0.597515,0.597515:0.0,0.0,1.0	0/1:38:0.986942:18,19:17-18,17-19:14,13,0,11:17,3|18,9|19,2:4,1|6,1|7,1|10,1|12,1|13,1|15,2|16,1|17,1|19,1:282.411:326.675,113.385:0.169767,0.61895:5.50292e-17,0.000124617,0.999879
-chr1	6872012	.	TTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTG	.	.	END=6872031;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:26:0.984722:3,4:3-4,4-4:12,14,0,0:3,2|4,10:NULL:189.039:366.612,131.36:0.478946,0.0:4.49923e-26,0.984772,0.0152629	0/0:27:0.999866:4,4:4-4,4-4:16,8,0,3:4,16:2,1|3,2:156.875:326.675,113.385:0.0,0.0:0.0,6.58613e-05,0.999934
-chr1	6872093	.	GTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6872104;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.942844:18,19:18-19,19-19:9,13,0,8:18,2|19,7:6,2|9,1|14,1|15,1|17,2|18,1:229.936:366.612,131.36:0.489073,0.0:0.0,0.0,1.0	0/0:22:0.99991:6,6:6-6,6-6:17,5,0,0:6,17:NULL:110.788:326.675,113.385:0.0,0.0:2.43651e-29,5.65674e-05,0.999947
-chr1	6872191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6872254;RU=ga;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.835472:14,14:12-14,12-14:7,6,0,0:14,7:NULL:84.8398:366.612,131.36:0.803751,0.803751:1.0,0.0,0.0	2/3:26:0.0451539:29,34:16-32,16-34:0,13,0,10:NULL:5,1|8,1|13,1|16,1|20,1|26,1|27,1|29,2|34,1:195.557:326.675,113.385:7.01576,8.73288:5.43447e-08,0.643162,0.35688
-chr1	6876058	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC	.	.	END=6876085;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:53:0.985613:18,18:16-18,16-18:17,21,0,14:16,2|18,15:6,1|7,3|8,1|9,1|10,1|11,1|12,2|13,1|14,1|16,1|17,1:392.646:366.612,131.36:0.673267,0.673267:0.0,6.87905e-06,0.999994	0/0:35:0.999752:14,14:14-17,14-17:17,5,0,9:14,17:5,2|8,2|9,1|11,1|12,1|13,1|14,1:190.632:326.675,113.385:0.924033,0.924033:3.31908e-30,2.98706e-05,0.999971
-chr1	6876396	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=6876439;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:8,8:8-8,8-8:27,15,0,9:8,27:4,2|5,1|7,6:316.024:366.612,131.36:0.0,0.0:1.0,1.22712e-08,0.0	0/0:35:0.995289:11,11:10-11,10-11:11,15,0,8:11,11:3,1|4,1|5,2|6,1|7,1|8,1|9,1:246.682:326.675,113.385:0.323567,0.323567:2.91614e-28,0.00364165,0.996368
-chr1	6876754	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6876787;RU=ag;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.57464:20,20:17-20,17-20:8,15,0,4:19,2|20,6:6,1|14,3:218.122:366.612,131.36:1.04876,1.04876:2.22301e-25,0.0277766,0.972279	0/0:45:0.953393:17,17:17-18,17-18:15,15,0,15:17,13|18,2:4,2|7,2|9,1|11,1|12,4|13,1|14,2|15,1|16,1:330.521:326.675,113.385:0.298675,0.298675:9.93793e-16,0.00036573,0.999636
-chr1	6877580	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=6877621;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.982039:16,16:16-16,16-16:11,21,0,9:16,11:6,2|8,1|9,2|10,2|15,2:310.378:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/2:22:0.299487:21,25:21-21,21-27:7,5,0,10:21,7:6,1|7,1|8,2|9,1|10,1|12,1|14,1|16,1|25,1:164.464:326.675,113.385:0.0,2.20972:3.99637e-15,1.38343e-07,1.0
-chr1	6877626	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6877675;RU=ga;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.921099:25,25:23-26,23-26:9,18,0,5:25,9:5,1|6,1|10,1|11,1|14,1:248.263:366.612,131.36:0.694906,0.694906:7.95104e-13,0.0391718,0.960897	1/1:20:0.124742:24,24:17-25,17-25:2,6,0,9:24,2:6,1|9,1|11,2|15,1|16,2|17,2:136.348:326.675,113.385:3.45807,3.45807:0.699534,0.284439,0.016058
-chr1	6881104	.	ATATATATATAT	ATATATATATATAT	.	.	END=6881115;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.999432:7,7:6-8,6-8:23,12,0,0:6,2|7,19|8,2:NULL:218.603:366.612,131.36:0.263076,0.263076:0.0,2.27564e-06,1.0	0/0:31:1.00001:6,6:6-6,6-6:21,9,0,0:6,21:NULL:171.527:326.675,113.385:0.0,0.0:4.71048e-28,4.14109e-06,0.999995
-chr1	6881253	.	TGTGTGTGTGTGTGTG	TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6881268;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.0:7,7:7-7,7-7:32,21,0,2:7,32:4,1|5,1:332.74:366.612,131.36:0.0,0.0:1.0,1.53291e-09,0.0	0/2:35:0.296309:8,13:8-8,8-14:19,12,0,4:8,19:4,1|5,1|7,1|13,1:230.348:326.675,113.385:0.0,2.59293:3.54084e-40,9.23434e-08,1.0
-chr1	6882309	.	TTGTTGTTGTTG	.	.	.	END=6882320;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:4,4:4-4,4-4:21,18,0,0:4,21:NULL:252.298:366.612,131.36:0.0,0.0:0.0,6.90775e-06,0.999994	0/0:28:0.999986:4,4:4-4,4-4:19,9,0,0:4,19:NULL:159.511:326.675,113.385:0.0,0.0:0.0,1.9165e-05,0.99998
-chr1	6884104	.	CAACAACAACAACAA	.	.	.	END=6884118;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:5,5:5-5,5-5:29,25,0,5:5,29:3,2|4,3:394.96:366.612,131.36:0.0,0.0:0.0,7.48635e-09,1.0	0/0:33:1.00001:5,5:5-5,5-5:21,10,0,2:5,21:4,2:192.446:326.675,113.385:0.0,0.0:0.0,3.0523e-06,1.0
-chr1	6886094	.	AAAACAAAACAAAAC	.	.	.	END=6886108;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:239.002:366.612,131.36:0.0,0.0:0.0,2.78941e-07,1.0	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:152.486:326.675,113.385:0.0,0.0:0.0,6.3523e-06,0.999994
-chr1	6888655	.	GCCAGCCAGCCA	.	.	.	END=6888666;RU=gcca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:237.094:366.612,131.36:0.0,0.0:0.0,2.2127e-08,1.0	0/0:32:1.0:3,3:3-3,3-3:23,7,0,2:3,23:2,2:168.016:326.675,113.385:0.0,0.0:0.0,4.24213e-07,1.0
-chr1	6891722	.	AGGGAGGGAGGGAGGG	.	.	.	END=6891737;RU=aggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999993:4,4:4-4,4-4:19,20,0,0:4,19:NULL:256.994:366.612,131.36:0.0,0.0:0.0,1.69107e-05,0.999986	0/0:35:0.999888:4,4:3-4,3-4:16,18,0,0:4,16:NULL:228.159:326.675,113.385:0.21692,0.21692:1.29816e-39,0.000103964,0.999896
-chr1	6891738	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=6891777;RU=ga;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.0539607:8,40:1-34,30-40:0,26,0,9:NULL:8,2|23,1|27,1|28,2|30,1|36,1|38,1:320.108:366.612,131.36:8.48812,2.77655:0.0,0.861394,0.138693	0/0:36:0.525647:20,20:18-20,18-20:9,18,0,8:19,3|20,6:5,1|6,1|8,1|14,3|18,1|20,1:277.976:326.675,113.385:0.66122,0.66122:2.49917e-14,0.468764,0.531344
-chr1	6897317	.	TATATATATATATATATATATATATATATATATATATATATATATATATA	TA,TATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=6897366;RU=ta;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00329521:1,1:1-4,1-4:0,6,0,0:NULL:NULL:52.7677:366.612,131.36:0.947603,0.947603:0.508489,0.44558,0.046024	2/2:9:0.110435:24,24:19-26,19-26:2,4,0,0:24,2:NULL:48.8495:326.675,113.385:2.84784,2.84784:0.636096,0.33096,0.0330274
-chr1	6901344	.	TATTATTATTAT	.	.	.	END=6901355;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.0:4,4:4-4,4-4:34,19,0,2:4,34:3,2:320.056:366.612,131.36:0.0,0.0:0.0,3.95915e-10,1.0	0/0:21:0.999632:4,4:4-4,4-4:15,6,0,0:4,15:NULL:114.575:326.675,113.385:0.0,0.0:3.2e-44,0.000213797,0.999788
-chr1	6901756	.	TTGGTTGGTTGG	.	.	.	END=6901767;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:21,23,0,0:3,21:NULL:300.394:366.612,131.36:0.0,0.0:0.0,4.12473e-06,0.999995	0/0:26:0.999895:3,3:3-3,3-3:16,6,0,4:3,16:2,4:150.512:326.675,113.385:0.0,0.0:0.0,3.60843e-05,0.999964
-chr1	6905302	.	ACCACCACCACC	.	.	.	END=6905313;RU=acc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:4,4:4-4,4-4:32,12,0,0:4,32:NULL:235.669:366.612,131.36:0.0,0.0:0.0,1.35117e-09,1.0	0/0:19:0.995309:4,4:4-4,4-4:11,8,0,0:4,11:NULL:114.625:326.675,113.385:0.0,0.0:1.1877e-37,0.00296103,0.997048
-chr1	6908211	.	CCCTCCCTCCCT	.	.	.	END=6908222;RU=ccct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:28,17,0,0:3,28:NULL:271.107:366.612,131.36:0.0,0.0:0.0,2.38284e-08,1.0	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.755:326.675,113.385:0.0,0.0:0.0,2.04981e-06,1.0
-chr1	6910139	.	AAACAAACAAACAAACAAAC	.	.	.	END=6910158;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:5,5:5-5,5-5:26,16,0,5:5,26:3,2|4,3:284.722:366.612,131.36:0.0,0.0:0.0,3.30433e-08,1.0	0/0:29:0.998254:5,5:5-5,5-5:13,14,0,2:5,13:2,1|4,1:194.432:326.675,113.385:0.0,0.0:2e-44,0.00126943,0.998733
-chr1	6911240	.	CCCACCCCACCCCAC	.	.	.	END=6911254;RU=cccac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999009:3,3:3-3,3-3:14,22,0,0:3,14:NULL:263.812:366.612,131.36:0.19802,0.19802:1.35e-43,0.000773966,0.999227	0/0:24:0.945509:3,3:3-3,3-3:8,16,0,0:3,8:NULL:177.178:326.675,113.385:0.19802,0.19802:1.03576e-24,0.0401747,0.959892
-chr1	6925140	.	TTTGTTTGTTTGTTTG	.	.	.	END=6925155;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:21,14,0,4:4,21:2,2|3,2:245.162:366.612,131.36:0.0,0.0:0.0,3.32111e-06,1.0	0/0:35:1.0:4,4:4-4,4-4:20,13,0,2:4,20:2,1|3,1:211.672:326.675,113.385:0.0,0.0:0.0,6.06461e-06,0.999994
-chr1	6930503	.	TGTTTTTTTGTTTTTTTGTTTTTT	.	.	.	END=6930526;RU=tgtttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.996973:3,3:1-3,1-3:12,10,0,0:3,12:NULL:142.16:366.612,131.36:0.922441,0.922441:1.80829e-40,0.00235837,0.997648	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:171.573:326.675,113.385:0.0,0.0:0.0,2.04177e-06,1.0
-chr1	6933915	.	GAGGGGAGGAGGGGAGGAGGGGAGGAGGGGAG	GAGGGGAGGAGGGGAG	.	.	END=6933946;RU=gaggggag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.999974:2,2:2-2,2-2:18,10,0,0:2,18:NULL:163.717:366.612,131.36:0.0,0.0:0.999986,1.75747e-05,0.0	0/0:8:0.353389:4,4:1-4,1-4:3,5,0,0:4,3:NULL:60.2262:326.675,113.385:0.782116,0.782116:2.05313e-08,0.459316,0.540791
-chr1	6935598	.	TACATACATACA	.	.	.	END=6935609;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:24,3,0,3:3,24:2,3:140.786:366.612,131.36:0.0,0.0:0.0,1.42977e-07,1.0	0/0:26:0.999555:3,3:3-3,3-3:14,8,0,4:3,14:2,4:155.577:326.675,113.385:0.0,0.0:0.0,0.000136997,0.999865
-chr1	6935929	.	TAATTAATTAAT	.	.	.	END=6935940;RU=taat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:24,18,0,3:3,24:2,3:274.258:366.612,131.36:0.0,0.0:0.0,1.95933e-07,1.0	0/0:20:0.997324:3,3:3-3,3-3:12,8,0,0:3,12:NULL:115.153:326.675,113.385:0.0,0.0:6.01711e-39,0.00141431,0.998588
-chr1	6938052	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6938097;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:56:0.340107:15,23:15-15,15-24:26,22,0,7:15,26:4,1|9,1|10,1|14,2|16,1|22,1:386.612:366.612,131.36:0.0,3.7378:0.269567,0.730435,0.0	0/2:58:0.361021:23,29:23-23,20-31:15,17,0,23:22,2|23,13:5,1|6,1|7,1|8,1|11,2|12,2|13,3|14,1|16,2|17,1|18,2|19,1|20,1|21,2|22,1|29,1:436.004:326.675,113.385:0.0,3.32414:1.20159e-17,2.01133e-05,0.99998
-chr1	6938544	.	ATACATACATACATAC	.	.	.	END=6938559;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:81:1.0:4,4:4-4,4-4:48,27,0,6:4,48:3,6:480.317:366.612,131.36:0.0,0.0:0.0,1.37533e-14,1.0	0/0:65:1.0:4,4:4-4,4-4:39,21,0,5:4,39:2,1|3,4:381.92:326.675,113.385:0.0,0.0:0.0,7.22622e-12,1.0
-chr1	6938593	.	CACACACACACACACACA	CACACACACACACACACACA,CACACACACACACACACACACA	.	.	END=6938610;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:42:0.969887:9,11:9-10,9-11:8,27,0,7:9,3|10,2|11,3:5,1|6,1|8,4|9,1:349.387:366.612,131.36:0.425627,0.513899:5.37484e-21,1.1268e-05,0.999993	0/1:64:0.961031:9,10:9-9,9-10:30,23,0,10:9,28|10,2:4,2|5,1|8,6|10,1:428.184:326.675,113.385:0.0,0.498798:7.6e-44,2.5635e-10,1.0
-chr1	6938918	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=6938965;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:76:0.560131:25,25:24-27,24-27:15,32,0,28:24,5|25,8|26,2:8,2|9,2|10,2|11,3|12,4|13,1|14,1|15,1|16,2|17,3|19,2|22,1|23,2|24,1|25,1:605.849:366.612,131.36:0.837322,0.837322:1.36305e-31,8.65444e-05,0.999917	0/2:64:0.403396:24,29:24-24,24-29:18,24,0,20:23,5|24,13:5,3|6,1|7,1|8,1|9,1|10,1|11,1|13,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|28,1|29,1:487.422:326.675,113.385:0.0,1.35271:1.02382e-27,1.19979e-11,1.0
-chr1	6945641	.	TGTGAGTGTGAGTGTGAG	TGTGAGTGTGAGTGTGAGTGTGAGTGTGAG	.	.	END=6945658;RU=tgtgag;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:35:1.0:3,5:3-3,5-5:21,14,0,0:3,14|5,7:NULL:226.503:366.612,131.36:0.0,0.0:0.0,3.70882e-29,1.0	0/0:54:1.0:3,3:3-3,3-3:29,21,0,4:3,29:2,3|3,1:332.918:326.675,113.385:0.0,0.0:0.0,8.39224e-09,1.0
-chr1	6945661	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6945680;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.284109:16,33:16-16,15-34:20,14,0,9:15,5|16,13|18,2:5,1|8,2|11,1|12,2|16,1|29,1|32,1:327.387:366.612,131.36:0.0990099,8.11798:0.0,0.0,1.0	0/0:62:1.0:10,10:10-10,10-10:39,17,0,6:9,3|10,36:5,1|6,1|7,1|8,1|9,2:371.987:326.675,113.385:0.0990099,0.0990099:0.0,2.72637e-08,1.0
-chr1	6954438	.	TATATATATATATATATA	TATATATATATATATATATA	.	.	END=6954455;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.803913:10,10:10-11,10-11:6,5,0,0:10,6:NULL:69.3638:366.612,131.36:0.465241,0.465241:6.04208e-12,0.0552173,0.944865	0/0:22:0.999478:9,9:9-9,9-9:15,7,0,0:9,15:NULL:128.249:326.675,113.385:0.0,0.0:2.06945e-18,0.000350763,0.999652
-chr1	6956316	.	ATTTATTTATTTATTTATTTATTTATTTATTT	ATTTATTTATTTATTTATTTATTTATTT	.	.	END=6956347;RU=attt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.816834:7,7:6-7,6-7:6,9,0,3:7,6:3,1|5,1|6,1:131.956:366.612,131.36:0.481803,0.481803:0.925084,0.0750118,2.38259e-10	0/0:26:0.999661:8,8:8-8,8-8:15,5,0,6:8,15:3,2|5,2|6,2:152.494:326.675,113.385:0.0,0.0:6.12333e-34,0.000170439,0.999833
-chr1	6957040	.	ATCATCATCATC	.	.	.	END=6957051;RU=atc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999894:4,4:4-4,4-4:16,14,0,2:4,16:3,2:206.579:366.612,131.36:0.0,0.0:1.47e-43,7.23921e-05,0.999932	0/0:36:1.0:4,4:4-4,4-4:28,8,0,0:4,28:NULL:182.817:326.675,113.385:0.0,0.0:0.0,3.3155e-08,1.0
-chr1	6958768	.	GTGTGTGTGTGT	GTGTGT,GTGTGTGTGTGTGTGTGT	.	.	END=6958779;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:0.425553:3,6:3-13,6-13:17,14,0,4:3,11|6,6:4,1|5,1|9,1|11,1:275.27:366.612,131.36:2.75429,2.87398:6.8036e-10,1.0,4.1744e-19	0/2:29:0.293816:6,9:6-6,6-10:10,17,0,2:6,10:6,1|8,1:213.017:326.675,113.385:0.0,1.39551:5.11656e-28,6.98227e-08,1.0
-chr1	6958877	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6958916;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:53:0.288595:17,27:17-17,16-27:20,18,0,15:16,4|17,14|18,2:4,1|5,1|6,1|7,1|8,1|13,2|14,4|15,2|16,1|24,1:394.452:366.612,131.36:0.0,4.77915:0.0548475,0.945238,1.754e-42	0/3:44:0.318887:20,35:20-20,20-35:15,11,0,15:20,15:5,1|7,3|9,2|12,1|13,2|17,1|18,2|19,1|35,2:299.43:326.675,113.385:0.0,6.05764:5.30546e-27,3.70236e-14,1.0
-chr1	6961641	.	AAGAAAAAAGAAAAAAGAAAAAAGAAAA	.	.	.	END=6961668;RU=aagaaaa;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.87995:4,4:1-4,1-4:7,22,0,0:4,7:NULL:235.531:366.612,131.36:0.650759,0.650759:6.73077e-21,0.113659,0.886439	0/0:30:0.999069:4,4:4-4,4-4:15,15,0,0:4,15:NULL:201.791:326.675,113.385:0.0,0.0:9.2e-44,0.00088725,0.999118
-chr1	6967994	.	TAATAATAATAA	.	.	.	END=6968005;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:4,4:4-4,4-4:20,12,0,0:4,20:NULL:189.935:366.612,131.36:0.0,0.0:0.0,7.90063e-06,0.999994	0/0:25:0.999557:4,4:4-4,4-4:15,10,0,0:4,15:NULL:149.73:326.675,113.385:0.0,0.0:7.03689e-40,0.000286317,0.999713
-chr1	6969238	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=6969285;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.890333:25,25:21-25,21-25:8,11,0,12:25,8:4,1|7,1|8,4|10,2|11,1|17,2|21,1:240.234:366.612,131.36:1.97147,1.97147:2.2967e-14,0.0600529,0.940036	0/0:47:0.66372:24,24:23-24,23-24:5,21,0,20:24,5:4,1|6,2|9,1|11,1|12,2|13,1|14,5|15,3|17,1|20,1|21,1|23,1:371.431:326.675,113.385:0.439006,0.439006:1.94957e-06,0.16676,0.83331
-chr1	6970340	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=6970399;RU=ag;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0794809:21,21:16-25,16-25:2,9,0,0:21,2:NULL:102.005:366.612,131.36:3.59565,3.59565:1.0,0.0,0.0	0/0:28:0.484082:30,30:29-30,29-30:4,12,0,11:30,4:6,1|7,1|9,1|10,1|12,3|18,1|22,1|23,1|30,1:220.422:326.675,113.385:0.414188,0.414188:1.43804e-12,0.213388,0.786655
-chr1	6970529	.	AGACAGACAGAC	AGACAGACAGACAGAC	.	.	END=6970540;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.165059:3,4:1-4,1-4:0,22,0,0:NULL:NULL:217.65:366.612,131.36:0.696456,0.905169:0.0883328,0.445598,0.466221	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:168.514:326.675,113.385:0.0,0.0:0.0,4.77189e-06,0.999995
-chr1	6974307	.	ACACACACACAC	.	.	.	END=6974318;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997981:6,6:6-6,6-6:12,18,0,4:6,12:4,1|5,3:247.705:366.612,131.36:0.0,0.0:2.70056e-25,0.000648585,0.999355	0/0:19:0.92277:6,6:6-7,6-7:7,9,0,2:6,7:5,2:129.578:326.675,113.385:0.486863,0.486863:8.90486e-15,0.0332825,0.966779
-chr1	6978082	.	ATTTATTTATTTATTT	.	.	.	END=6978097;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999585:4,4:4-4,4-4:15,13,0,0:4,15:NULL:178.159:366.612,131.36:0.0,0.0:3e-45,0.000318068,0.999683	0/0:25:0.999606:4,4:4-4,4-4:15,10,0,0:4,15:NULL:154.043:326.675,113.385:0.0,0.0:3e-45,0.000300969,0.999704
-chr1	6979840	.	TTCATTCATTCA	.	.	.	END=6979851;RU=ttca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999935:3,3:3-3,3-3:17,10,0,0:3,17:NULL:155.607:366.612,131.36:0.0,0.0:0.0,3.22506e-05,0.999971	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:165.684:326.675,113.385:0.0,0.0:0.0,3.1439e-06,1.0
-chr1	6981484	.	TGTCTGTCTGTCTGTC	.	.	.	END=6981499;RU=tgtc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:4,4:4-4,4-4:44,11,0,2:4,44:3,2:283.345:366.612,131.36:0.0,0.0:0.0,2.90605e-13,1.0	0/0:60:1.0:4,4:4-4,4-4:32,19,0,9:4,32:2,1|3,8:361.317:326.675,113.385:0.0,0.0:0.0,7.5252e-10,1.0
-chr1	6982427	.	TTGTTTGTTTGTTTGT	.	.	.	END=6982442;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:30,13,0,4:4,30:2,1|3,3:265.948:366.612,131.36:0.0,0.0:0.0,3.12693e-09,1.0	0/0:48:1.0:4,4:4-4,4-4:32,13,0,3:4,32:3,3:271.065:326.675,113.385:0.0,0.0:0.0,1.84623e-09,1.0
-chr1	6982601	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=6982652;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.542982:12,12:11-12,11-12:11,20,0,5:11,3|12,8:4,1|5,1|6,1|8,1|9,1:272.772:366.612,131.36:0.45695,0.45695:1.0,0.0,0.0	0/2:28:0.312785:26,39:24-27,24-39:3,6,0,17:26,3:7,1|8,2|10,1|12,1|15,2|16,1|17,2|18,1|24,3|25,2|39,1:210.08:326.675,113.385:0.517131,6.22137:8.48768e-11,0.000485426,0.999515
-chr1	6983427	.	GAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGA	.	.	END=6983442;RU=ga;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0292991:9,9:9-14,9-14:0,7,0,0:NULL:NULL:66.6014:366.612,131.36:1.08487,1.08487:0.0,0.0,1.0	0/0:23:0.929127:8,8:7-8,7-8:15,8,0,0:7,2|8,13:NULL:140.313:326.675,113.385:0.431574,0.431574:5.41404e-20,0.0708413,0.929253
-chr1	6985748	.	AATCAATCAATCAATCAATCAATCAATC	AATCAATCAATCAATC	.	.	END=6985775;RU=aatc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0496217:4,4:2-5,2-5:0,13,0,2:NULL:2,1|4,1:132.329:366.612,131.36:0.874544,0.874544:0.610375,0.347611,0.0421121	0/0:56:1.0:7,7:7-7,7-7:33,14,0,9:7,33:3,2|4,2|5,2|6,3:328.098:326.675,113.385:0.0,0.0:0.0,3.53258e-10,1.0
-chr1	6985795	.	AACAACAACAACAACAAC	.	.	.	END=6985812;RU=aac;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999876:6,6:5-6,5-6:17,16,0,0:6,17:NULL:214.345:366.612,131.36:0.236383,0.236383:1.7e-44,8.97379e-05,0.999911	0/0:50:1.0:6,6:6-6,6-6:34,14,0,2:6,34:4,2:280.867:326.675,113.385:0.0,0.0:0.0,3.42017e-10,1.0
-chr1	6986592	.	AAACAAACAAACAAAC	AAACAAACAAAC	.	.	END=6986607;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.095574:3,3:1-4,1-4:0,14,0,2:NULL:3,2:145.263:366.612,131.36:0.896573,0.896573:0.27164,0.550752,0.177626	0/0:33:0.998937:4,4:4-4,4-4:13,17,0,3:4,13:2,1|3,2:226.162:326.675,113.385:0.0,0.0:7.04477e-36,0.000588515,0.999415
-chr1	6987484	.	AAGAAAGAAAGA	.	.	.	END=6987495;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.408:366.612,131.36:0.0,0.0:0.0,1.80572e-06,1.0	0/0:26:1.00001:3,3:3-3,3-3:21,5,0,0:3,21:NULL:128.281:326.675,113.385:0.0,0.0:0.0,2.64797e-06,1.0
-chr1	6988550	.	TAAATAAATAAA	.	.	.	END=6988561;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999939:3,3:3-3,3-3:17,8,0,0:3,17:NULL:148.37:366.612,131.36:0.0,0.0:0.0,3.19832e-05,0.999971	0/0:24:1.00001:3,3:3-3,3-3:21,3,0,0:3,21:NULL:111.913:326.675,113.385:0.0,0.0:0.0,2.54549e-06,1.0
-chr1	6988683	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=6988726;RU=tttc;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.021606:9,9:1-11,1-11:0,7,0,2:NULL:8,1|9,1:82.6237:366.612,131.36:3.94562,3.94562:0.459313,0.48336,0.0574912	0/0:32:0.467214:11,11:9-11,9-11:13,12,0,7:9,2|11,11:3,1|6,2|7,1|8,1|10,2:229.771:326.675,113.385:0.999559,0.999559:5.65804e-20,0.53254,0.467569
-chr1	6988729	.	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC,CCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTCCCTTTCTTC	.	.	END=6988989;RU=cctttcttc;PERIOD=9;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0270839:9,9:1-10,1-10:0,4,0,2:NULL:8,1|9,1:49.0823:366.612,131.36:3.8178,3.8178:1.0,0.0,0.0	2/3:74:0.229205:13,44:10-19,40-49:0,5,45,24:NULL:4,4|5,1|6,3|7,3|8,2|9,3|10,5|11,1|12,1|13,1:532.764:326.675,113.385:1.94191,2.30908:2.71327e-26,1.0,2.09857e-20
-chr1	6988990	.	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	.	.	END=6989021;RU=cttt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0460909:12,12:12-15,12-15:0,8,0,3:NULL:3,2|7,1:99.5242:366.612,131.36:1.27204,1.27204:0.0,0.0,1.0	0/0:52:1.00001:8,8:4-8,4-8:23,14,0,14:8,23:3,2|4,5|5,2|6,1|7,4:324.178:326.675,113.385:0.780108,0.780108:0.0,4.11433e-07,1.0
-chr1	6994475	.	CTGCTGCTGCTG	.	.	.	END=6994486;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.992411:4,4:4-4,4-4:11,14,0,0:4,11:NULL:170.899:366.612,131.36:0.0,0.0:1.1156e-33,0.00521109,0.994799	0/0:43:1.0:4,4:4-4,4-4:24,19,0,0:4,24:NULL:271.361:326.675,113.385:0.0,0.0:0.0,1.08504e-06,1.0
-chr1	6996371	.	AATAATAATAATAATAAT	.	.	.	END=6996388;RU=aat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999768:6,6:6-6,6-6:16,12,0,0:6,16:NULL:180.067:366.612,131.36:0.0,0.0:8.38304e-39,0.000169845,0.999833	0/0:42:1.0:6,6:2-6,2-6:26,11,0,4:6,26:5,4:232.728:326.675,113.385:1.24611,1.24611:0.0,5.89955e-08,1.0
-chr1	6996545	.	AAGAAGAAGAAGAAG	.	.	.	END=6996559;RU=aag;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994013:5,5:5-5,5-5:11,12,0,2:5,11:3,1|5,1:174.922:366.612,131.36:0.0,0.0:2.00511e-39,0.00311578,0.996891	0/0:34:1.0:5,5:5-5,5-5:26,6,0,2:5,26:4,1|5,1:173.389:326.675,113.385:0.0,0.0:0.0,3.43247e-08,1.0
-chr1	6998981	.	AAAATAAAATAAAAT	AAAATAAAATAAAATAAAATAAAAT	.	.	END=6998995;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.997585:5,5:5-5,5-5:13,14,0,0:5,13:NULL:187.766:366.612,131.36:0.0,0.0:0.0,0.000720986,0.99928	0/0:24:0.999132:3,3:3-3,3-3:13,9,0,2:3,13:2,2:142.538:326.675,113.385:0.0,0.0:6e-45,0.000369236,0.999636
-chr1	7000338	.	AATAAATAAATAAATAAATAAATA	AATA	.	.	END=7000361;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0780744:1,1:1-3,1-3:0,14,0,0:NULL:NULL:128.907:366.612,131.36:0.40047,0.40047:0.578545,0.378725,0.0428552	0/0:28:0.999853:6,6:6-6,6-6:16,8,0,4:6,16:3,1|4,1|5,2:169.898:326.675,113.385:0.0,0.0:4.152e-42,6.63619e-05,0.999934
-chr1	7002437	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7002468;RU=ga;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:31:0.98158:16,17:15-17,15-17:8,19,0,3:16,4|17,4:6,1|7,1|14,1:246.594:366.612,131.36:0.342408,0.451337:8.76787e-11,0.0012311,0.998771	0/0:36:0.731673:16,16:12-16,12-16:17,17,0,0:15,4|16,13:NULL:248.743:326.675,113.385:1.0297,1.0297:1.31245e-14,0.268042,0.731961
-chr1	7002484	.	GAAAGGAAAGGAAAG	.	.	.	END=7002498;RU=gaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:251.333:366.612,131.36:0.0,0.0:0.0,2.95141e-07,1.0	0/0:34:0.999995:3,3:3-3,3-3:20,14,0,0:3,20:NULL:213.569:326.675,113.385:0.0,0.0:0.0,1.18702e-05,0.999987
-chr1	7003509	.	TATATATATATA	.	.	.	END=7003520;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.994474:6,6:6-6,6-6:12,18,0,0:6,12:NULL:217.202:366.612,131.36:0.0,0.0:2.94885e-21,0.00378633,0.996224	0/0:25:0.996778:6,6:6-6,6-6:12,13,0,0:6,12:NULL:167.642:326.675,113.385:0.0,0.0:1.43452e-21,0.00203514,0.997973
-chr1	7004299	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7004318;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:228.653:366.612,131.36:0.0,0.0:0.0,7.67878e-06,0.999994	0/0:30:0.999979:4,4:3-4,3-4:17,9,0,3:4,17:3,3:174.62:326.675,113.385:0.35561,0.35561:0.0,1.85123e-05,0.999985
-chr1	7004803	.	CACACACACACACACACACACACACACACA	.	.	.	END=7004832;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999293:15,15:15-15,15-15:15,19,0,14:15,15:4,1|7,1|10,2|11,4|12,2|14,4:356.714:366.612,131.36:0.0,0.0:2.76952e-21,0.000211699,0.999789	0/0:58:0.706049:15,15:14-15,14-15:16,20,0,22:14,4|15,12:5,4|6,4|7,2|8,2|9,1|10,4|11,1|12,1|14,3:434.637:326.675,113.385:0.442564,0.442564:8.53683e-14,0.293692,0.706312
-chr1	7005829	.	TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT	.	.	.	END=7005885;RU=tgt;PERIOD=3;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:0.741956:19,19:17-20,17-20:10,26,0,18:18,2|19,8:4,1|5,1|6,3|10,2|13,2|14,2|16,2|17,3|18,1|19,1:432.146:366.612,131.36:0.775697,0.775697:9.4889e-20,0.252631,0.747375	0/0:41:0.997035:19,19:18-19,18-19:12,12,0,16:19,12:5,2|6,1|7,2|12,2|13,1|14,1|15,2|16,3|18,2:284.233:326.675,113.385:0.169767,0.169767:2.05796e-21,0.00117709,0.998829
-chr1	7006807	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7006830;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999794:6,6:6-6,6-6:15,11,0,7:6,15:3,1|4,2|5,4:211.852:366.612,131.36:0.0,0.0:0.0,0.000106426,0.999895	0/0:23:0.975827:6,6:6-6,6-6:8,10,0,5:6,8:2,1|4,2|5,2:156.199:326.675,113.385:0.0,0.0:1.54873e-27,0.0118326,0.988195
-chr1	7006964	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=7007007;RU=aaag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.979752:13,13:13-13,13-13:9,7,0,4:13,9:4,1|6,1|7,2:131.034:366.612,131.36:0.0,0.0:6.58584e-29,0.00497299,0.99504	0/0:17:0.758626:11,11:11-11,11-11:5,5,0,7:11,5:2,1|4,1|6,1|7,1|8,1|9,2:116.354:326.675,113.385:0.0990099,0.0990099:1.36893e-12,0.116742,0.88336
-chr1	7008700	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=7008763;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.497359:17,17:16-17,16-17:3,16,0,12:17,3:4,2|6,1|7,2|8,2|10,1|13,1|15,1|16,2:253.862:366.612,131.36:0.253975,0.253975:3.20725e-23,0.0799344,0.920163	0/0:22:0.508596:16,16:13-16,13-16:4,10,0,8:16,4:5,1|6,3|7,2|8,1|10,1:169.954:326.675,113.385:0.772658,0.772658:4.78346e-09,0.374145,0.625905
-chr1	7009944	.	AACAACAACAAC	.	.	.	END=7009955;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:4,4:4-4,4-4:24,6,0,0:4,24:NULL:146.992:366.612,131.36:0.0,0.0:0.0,4.95377e-07,1.0	0/0:16:0.994513:4,4:4-4,4-4:11,5,0,0:4,11:NULL:89.5565:326.675,113.385:0.0,0.0:6.90523e-37,0.0032162,0.996792
-chr1	7016143	.	ATGTTATGTTATGTT	.	.	.	END=7016157;RU=atgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:26,9,0,0:3,26:NULL:183.945:366.612,131.36:0.0,0.0:0.0,1.15585e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:31,19,0,0:3,31:NULL:302.422:326.675,113.385:0.0,0.0:0.0,2.5526e-09,1.0
-chr1	7018592	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7018643;RU=tg;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.518763:14,14:14-15,14-15:11,11,0,8:14,9|15,2:5,1|6,1|9,1|12,2|13,3:214.581:366.612,131.36:0.594554,0.594554:1.0,0.0,0.0	2/3:49:0.975679:25,28:25-34,28-32:10,12,0,25:25,5|28,5:4,1|5,1|6,1|7,1|11,1|17,2|18,1|20,4|21,2|22,2|23,3|24,2|25,2|27,1|32,1:382.265:326.675,113.385:3.4316,1.90016:1.06017e-15,0.977485,0.022559
-chr1	7022856	.	ACACACACACACACACACACACAC	ACACACACACAC	.	.	END=7022879;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:38:0.94614:6,12:4-12,12-12:10,19,0,8:6,2|12,8:4,1|6,1|9,1|10,4|11,1:294.203:366.612,131.36:2.66025,0.0:8.80497e-17,0.951905,0.0481708	0/0:25:0.830934:12,12:10-12,10-12:6,9,0,8:12,6:4,1|5,1|6,2|7,1|9,1|10,1|11,1:174.926:326.675,113.385:0.831212,0.831212:1.38565e-12,0.094323,0.905777
-chr1	7022880	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7022935;RU=ag;PERIOD=2;REF=28.0;EXPTHRESH=28	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:35:0.377048:22,34:22-22,18-35:9,20,0,3:22,9:5,1|13,1|34,1:259.569:366.612,131.36:0.278639,6.38699:7.71756e-05,0.999925,8.7181e-26	0/2:25:0.217122:28,32:26-30,26-32:3,11,0,9:28,3:6,1|8,1|18,1|21,1|23,1|26,2|27,1|29,1:192.037:326.675,113.385:0.717258,1.5095:5.02768e-11,0.00427917,0.995733
-chr1	7023312	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT,CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=7023410;RU=ctt;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.0671344:25,29:23-31,25-31:0,16,0,19:NULL:4,1|9,2|10,1|13,1|14,1|15,1|16,2|17,1|20,1|21,1|22,2|23,1|24,2|26,1|29,1:296.96:366.612,131.36:2.70302,2.1949:1.0,0.0,0.0	3/3:31:0.0272976:34,34:11-34,11-34:0,15,0,15:NULL:6,1|7,2|13,2|15,1|18,1|20,1|21,1|22,1|23,1|28,1|32,1|33,1|34,1:257.589:326.675,113.385:10.0786,10.0786:9.48561e-16,0.620223,0.379835
-chr1	7025016	.	AACCAACCAACC	.	.	.	END=7025027;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:226.678:366.612,131.36:0.0,0.0:0.0,7.01753e-06,0.999994	0/0:35:1.00001:3,3:3-3,3-3:20,12,0,3:3,20:2,3:205.946:326.675,113.385:0.0,0.0:0.0,3.0456e-06,1.0
-chr1	7026416	.	TTTATTTTATTTTAT	.	.	.	END=7026430;RU=tttat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999863:3,3:3-3,3-3:16,20,0,0:3,16:NULL:251.656:366.612,131.36:0.0,0.0:0.0,0.000104511,0.999896	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:168.583:326.675,113.385:0.0,0.0:0.0,3.49234e-07,1.0
-chr1	7028391	.	AATAAATAAATA	.	.	.	END=7028402;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,18,0,3:3,22:2,3:270.735:366.612,131.36:0.0,0.0:0.0,9.56457e-07,1.0	0/0:43:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:243.642:326.675,113.385:0.0,0.0:0.0,1.91427e-08,1.0
-chr1	7028876	.	TTTATTTATTTA	.	.	.	END=7028887;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999966:3,3:3-3,3-3:18,11,0,0:3,18:NULL:172.431:366.612,131.36:0.0,0.0:0.0,2.71628e-05,0.999972	0/0:29:0.999871:3,3:3-3,3-3:17,12,0,0:3,17:NULL:186.491:326.675,113.385:0.0,0.0:0.0,9.72933e-05,0.999903
-chr1	7029276	.	ACACACACACACACACACACACAC	.	.	.	END=7029299;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999467:12,12:12-13,12-13:15,19,0,10:12,15:7,3|8,1|10,2|11,4:313.42:366.612,131.36:0.21692,0.21692:3.2571e-23,0.000121464,0.99988	0/0:56:0.999972:12,12:12-14,12-14:18,20,0,15:12,18:5,3|6,2|7,2|9,4|10,2|11,2:383.754:326.675,113.385:0.617999,0.617999:4.03621e-28,1.31504e-05,0.999987
-chr1	7029315	.	AAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7029344;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999899:6,6:6-6,6-6:17,16,0,4:6,17:2,2|3,1|5,1:243.699:366.612,131.36:0.0,0.0:0.0,7.21659e-05,0.999932	0/0:45:1.0:6,6:6-6,6-6:24,17,0,4:6,24:2,1|3,1|5,2:282.108:326.675,113.385:0.0,0.0:0.0,3.38642e-07,1.0
-chr1	7032756	.	AATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	.	.	.	END=7032799;RU=aata;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.970244:11,11:11-11,11-11:7,14,0,14:11,7:3,1|5,4|6,1|7,2|8,3|9,1|10,2:257.761:366.612,131.36:0.0,0.0:1.68122e-16,0.0127223,0.987305	0/0:30:0.989657:11,11:11-15,11-15:10,12,0,7:11,10:6,3|7,2|10,2:198.339:326.675,113.385:1.77026,1.77026:2.88596e-22,0.00340046,0.99661
-chr1	7032984	.	ACAAAAAAACAAAAAAACAAAAAA	.	.	.	END=7033007;RU=acaaaaaa;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.975755:3,3:3-3,3-3:9,14,0,0:3,9:NULL:160.968:366.612,131.36:0.19802,0.19802:2.95058e-28,0.0203616,0.97968	0/0:25:0.99989:3,3:3-3,3-3:16,6,0,3:3,16:2,3:138.409:326.675,113.385:0.0,0.0:0.0,4.93539e-05,0.999955
-chr1	7033046	.	AGACAGACAGACAGAC	AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC,AGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAC	.	.	END=7033061;RU=agac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:27:0.276065:4,17:3-4,3-17:13,10,0,3:3,6|4,7:13,2|14,1:202.123:366.612,131.36:0.412766,5.41922:4.18022e-24,6.21541e-06,0.999995	0/1:33:0.338812:4,14:4-4,4-14:22,8,0,3:4,22:7,1|10,1|14,1:200.432:326.675,113.385:0.0,3.25928:0.0,5.07546e-22,1.0
-chr1	7033993	.	TATATATATATA	TATATATATATATATATATATATATATATATATATATA	.	.	END=7034004;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0159096:19,19:1-20,1-20:0,5,0,3:NULL:9,1|12,1|19,1:72.9907:366.612,131.36:5.54252,5.54252:1.41404e-22,0.182165,0.817898	0/0:29:0.998488:6,6:6-6,6-6:13,16,0,0:6,13:NULL:199.889:326.675,113.385:0.0,0.0:8.53176e-25,0.000960543,0.999043
-chr1	7035493	.	CACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACA	.	.	END=7035530;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.876971:17,19:16-18,18-19:9,9,0,12:16,3|17,3|19,3:6,2|7,2|8,1|9,1|11,1|16,1|17,1|18,3:231.892:366.612,131.36:0.693494,0.382696:0.000484166,0.999074,0.000449598	0/0:34:0.607126:19,19:18-19,18-19:14,10,0,10:18,4|19,10:7,1|8,1|10,1|11,2|12,1|13,2|17,1|19,1:245.262:326.675,113.385:0.481803,0.481803:1.87697e-18,0.391868,0.608193
-chr1	7035536	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7035569;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.924009:14,16:14-16,16-16:8,13,0,3:14,3|16,5:5,1|8,1|10,1:182.436:366.612,131.36:0.951732,0.278639:0.996528,0.00347855,1.03467e-06	0/0:33:0.572888:17,17:17-18,17-18:20,10,0,3:16,3|17,14|18,3:5,1|8,1|13,1:222.459:326.675,113.385:0.475866,0.475866:2.53131e-18,0.000967349,0.999036
-chr1	7038709	.	AAATAAATAAAT	AAATAAATAAATAAATAAAT	.	.	END=7038720;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:21:1.0:3,5:3-3,5-5:10,9,0,2:3,7|5,3:5,2:141.417:366.612,131.36:0.0,0.0:1e-45,3.77514e-20,1.0	0/0:8:0.928445:3,3:3-3,3-3:7,1,0,0:3,7:NULL:37.2692:326.675,113.385:0.0,0.0:7.60169e-21,0.0294883,0.970568
-chr1	7038726	.	TAAATAAATAAATAAATAAATAAATAAATAAATAAA	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	.	.	END=7038761;RU=taaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.502446:11,11:8-11,8-11:4,7,0,0:11,4:NULL:80.8551:366.612,131.36:0.630406,0.630406:2.8178e-14,0.129084,0.871013	0/0:9:0.726846:9,9:9-9,9-9:5,2,0,2:9,5:3,1|5,1:53.6287:326.675,113.385:0.0,0.0:5.87215e-13,0.144436,0.855649
-chr1	7039465	.	TATATATATATATATATATATATATATATATA	TATATA,TATATATATATA	.	.	END=7039496;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:14:0.0164109:3,6:1-8,1-8:0,14,0,0:NULL:NULL:142.434:366.612,131.36:2.00357,2.14927:0.721099,0.264067,0.0148589	0/0:14:0.265955:16,16:4-16,4-16:5,5,0,0:16,5:NULL:74.2867:326.675,113.385:3.94882,3.94882:4.58141e-07,0.622396,0.377661
-chr1	7046294	.	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAATAAATAAAT	.	.	END=7046333;RU=aaat;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.993317:8,8:8-8,8-8:11,19,0,4:8,11:2,1|4,1|5,1|7,1:243.68:366.612,131.36:0.0,0.0:0.998276,0.00172933,1.72211e-26	0/0:54:0.999995:10,10:9-10,9-10:19,23,0,11:10,19:3,1|4,2|6,2|7,1|8,3|9,2:380.597:326.675,113.385:0.236383,0.236383:0.0,1.23677e-05,0.999987
-chr1	7046658	.	AATAAATAAATAAATA	AATA	.	.	END=7046673;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0869115:1,1:1-4,1-4:0,13,0,0:NULL:NULL:133.022:366.612,131.36:1.30693,1.30693:0.464361,0.44253,0.0932569	0/0:26:0.971748:4,4:4-4,4-4:9,17,0,0:4,9:NULL:183.662:326.675,113.385:0.0,0.0:7.18699e-20,0.0220878,0.977957
-chr1	7047632	.	ATTATTATTATT	.	.	.	END=7047643;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.97436:4,4:4-4,4-4:9,12,0,0:4,9:NULL:149.826:366.612,131.36:0.0,0.0:1.857e-26,0.0166801,0.983356	0/0:23:0.999909:4,4:4-4,4-4:17,6,0,0:4,17:NULL:120.143:326.675,113.385:0.0,0.0:0.0,5.72559e-05,0.999942
-chr1	7047891	.	TAATATAATATAATATAATATAATA	TAATATAATATAATATAATATAATATAATATAATA	.	.	END=7047915;RU=taata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998981:7,7:7-8,7-8:14,17,0,4:7,14:3,1|4,1|5,2:245.806:366.612,131.36:0.382696,0.382696:0.0,0.000136251,0.999865	0/0:26:0.997731:5,5:5-5,5-5:12,10,0,4:5,12:2,1|3,1|4,2:170.786:326.675,113.385:0.0,0.0:5.98175e-27,0.00149521,0.998511
-chr1	7050067	.	AAATAAATAAATAAAT	.	.	.	END=7050082;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997876:4,4:4-4,4-4:13,9,0,2:4,13:3,2:150.223:366.612,131.36:0.0,0.0:4.01234e-40,0.000994216,0.999012	0/0:29:0.999941:4,4:2-4,2-4:17,8,0,2:4,17:3,2:157.568:326.675,113.385:0.694341,0.694341:0.0,2.86342e-05,0.999972
-chr1	7052312	.	TTTCTTTCTTTC	.	.	.	END=7052323;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999977:3,3:3-3,3-3:17,19,0,2:3,17:2,2:259.885:366.612,131.36:0.0,0.0:0.0,2.67102e-05,0.999972	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.089:326.675,113.385:0.0,0.0:0.0,9.44406e-08,1.0
-chr1	7068379	.	CCCCCCACCCCCCACCCCCCA	CCCCCCA	.	.	END=7068399;RU=cccccca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.599661:3,3:1-3,1-3:4,7,0,0:3,4:NULL:76.9325:366.612,131.36:0.339533,0.339533:3.80433e-10,0.225051,0.774984	1/1:4:0.0466103:1,1:1-3,1-3:0,3,0,0:NULL:NULL:26.5653:326.675,113.385:0.913899,0.913899:0.162367,0.48561,0.352167
-chr1	7069168	.	TGTGTGTGTGTGTG	TGTGTGTGTGTG,TGTGTGTGTGTGTGTG	.	.	END=7069181;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:34:0.734558:6,8:6-8,8-8:20,13,0,0:6,2|8,18:NULL:214.145:366.612,131.36:0.98891,0.0:0.0,0.734637,0.265363	0/0:33:0.999851:7,7:6-7,6-7:16,14,0,2:7,16:6,2:203.023:326.675,113.385:0.345543,0.345543:3.63253e-33,8.08638e-05,0.999919
-chr1	7069209	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	.	END=7069246;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.583046:19,19:16-20,16-20:5,17,0,3:19,5:9,1|10,1|17,1:203.784:366.612,131.36:1.39016,1.39016:2.35734e-07,0.292289,0.707716	0/0:40:0.993181:19,19:19-19,19-19:15,12,0,12:18,2|19,13:7,1|10,1|11,2|12,1|13,2|15,2|16,1|17,2:271.882:326.675,113.385:0.139319,0.139319:9.11502e-17,0.00584253,0.994173
-chr1	7071018	.	TTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTA	.	.	END=7071053;RU=tta;PERIOD=3;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999002:10,10:10-10,10-10:13,23,0,11:10,13:4,3|5,1|6,2|7,1|8,1|9,3:339.761:366.612,131.36:0.0,0.0:0.999697,0.00030462,1.39775e-29	0/0:26:0.979369:12,12:12-12,12-12:9,12,0,5:12,9:5,1|9,1|10,1|11,2:189.892:326.675,113.385:0.0,0.0:7.30704e-17,0.0105619,0.989462
-chr1	7072179	.	TTTGTTTGTTTG	.	.	.	END=7072190;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.00001:3,3:3-3,3-3:20,5,0,2:3,20:2,2:136.258:366.612,131.36:0.0,0.0:0.0,3.13871e-06,1.0	0/0:52:1.0:3,3:3-3,3-3:37,15,0,0:3,37:NULL:289.246:326.675,113.385:0.0,0.0:0.0,4.57678e-11,1.0
-chr1	7086512	.	TCCTTCCTTCCT	.	.	.	END=7086523;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:30,27,0,0:3,30:NULL:354.947:366.612,131.36:0.0,0.0:0.0,8.16899e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:19,15,0,0:3,19:NULL:209.826:326.675,113.385:0.0,0.0:0.0,9.0128e-06,0.999994
-chr1	7087714	.	TATATATATATATATATA	TATATA,TATATATATATATATA	.	.	END=7087731;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.999984:3,3:3-3,3-3:19,20,0,0:3,19:NULL:257.181:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	2/0:14:0.933757:8,9:8-9,9-9:11,3,0,0:8,3|9,8:NULL:78.6639:326.675,113.385:0.478946,0.0:1.99405e-08,0.934517,0.0655771
-chr1	7088366	.	AAACAAACAAACAAAC	.	.	.	END=7088381;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:27,18,0,3:4,27:2,1|3,2:298.647:366.612,131.36:0.0,0.0:0.0,1.04635e-07,1.0	0/0:34:1.0:4,4:4-4,4-4:23,8,0,2:4,23:2,1|3,1:183.097:326.675,113.385:0.139319,0.139319:0.0,4.63816e-07,1.0
-chr1	7089402	.	AGGAGGAGGAGG	.	.	.	END=7089413;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.999055:4,4:4-4,4-4:14,5,0,0:4,14:NULL:104.682:366.612,131.36:0.0,0.0:0.0,0.000531556,0.99947	0/0:23:0.999212:4,4:4-4,4-4:14,9,0,0:4,14:NULL:136.969:326.675,113.385:0.0,0.0:0.0,0.00055484,0.999447
-chr1	7091385	.	ATCATCATCATCATC	.	.	.	END=7091399;RU=atc;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:5,5:5-5,5-5:22,19,0,3:5,22:3,1|4,2:285.323:366.612,131.36:0.0,0.0:0.0,1.23723e-06,1.0	0/0:25:0.999985:5,5:5-5,5-5:18,7,0,0:5,18:NULL:140.115:326.675,113.385:0.0,0.0:0.0,1.96216e-05,0.99998
-chr1	7091399	.	CACCACCACCACCAC	.	.	.	END=7091413;RU=cac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:5,5:5-5,5-5:21,18,0,3:5,21:4,3:272.157:366.612,131.36:0.0,0.0:0.0,2.06007e-06,1.0	0/0:24:0.999984:5,5:5-5,5-5:18,6,0,0:5,18:NULL:130.27:326.675,113.385:0.0,0.0:0.0,2.13014e-05,0.999979
-chr1	7097340	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7097369;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:39:0.266045:16,21:15-16,15-22:15,13,0,11:15,5|16,10:6,1|7,2|8,2|10,1|11,1|12,1|14,1|15,1|19,1:287.967:366.612,131.36:0.169767,2.39935:2.43486e-36,8.03973e-08,1.0	0/0:34:0.979289:15,15:14-15,14-15:12,12,0,9:14,2|15,10:7,1|9,2|10,1|12,1|13,1|14,2|15,1:238.408:326.675,113.385:0.352842,0.352842:2.76799e-20,0.016334,0.983702
-chr1	7097804	.	ATAATAATAATA	.	.	.	END=7097815;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.996042:4,4:4-4,4-4:12,13,0,0:4,12:NULL:164.437:366.612,131.36:0.0,0.0:3.65495e-28,0.00297296,0.997034	0/0:29:0.999954:4,4:4-4,4-4:17,8,0,4:4,17:3,3|4,1:169.671:326.675,113.385:0.0,0.0:0.0,1.21917e-05,0.999987
-chr1	7099389	.	ATTTATTTATTTATTTATTTATTT	.	.	.	END=7099412;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:6,6:6-6,6-6:26,19,0,3:6,26:2,1|5,2:293.598:366.612,131.36:0.0,0.0:0.0,7.89356e-08,1.0	0/0:26:0.99991:6,6:6-6,6-6:17,6,0,3:6,17:3,2|4,1:150.344:326.675,113.385:0.0,0.0:1.42e-42,5.46034e-05,0.999948
-chr1	7099628	.	TGTGTGTGTGTG	.	.	.	END=7099639;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:6,6:6-6,6-6:33,18,0,6:6,33:4,5|5,1:335.292:366.612,131.36:0.0,0.0:0.0,7.73598e-10,1.0	0/0:73:1.0:6,6:6-7,6-7:49,14,0,9:5,2|6,47:4,3|5,5|7,1:422.624:326.675,113.385:0.431574,0.431574:0.0,5.61873e-11,1.0
-chr1	7099942	.	ATGTATGTATGTATGTATGT	.	.	.	END=7099961;RU=atgt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:5,5:5-5,5-5:19,18,0,3:5,19:2,2|4,1:261.311:366.612,131.36:0.0,0.0:0.0,1.01711e-05,0.999993	0/0:68:1.0:5,5:5-5,5-5:35,26,0,7:5,35:2,1|3,2|4,4:429.734:326.675,113.385:0.0,0.0:0.0,9.13639e-11,1.0
-chr1	7101482	.	TTGTTGTTGTTGTTG	.	.	.	END=7101496;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999921:5,5:5-5,5-5:17,12,0,3:5,17:3,1|4,2:197.488:366.612,131.36:0.0,0.0:0.0,4.4001e-05,0.999957	0/0:39:1.0:5,5:5-5,5-5:25,11,0,3:5,25:4,3:224.371:326.675,113.385:0.0,0.0:0.0,7.60404e-08,1.0
-chr1	7101721	.	AACAACAACAAC	.	.	.	END=7101732;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:2-4,2-4:25,19,0,2:4,25:3,2:281.334:366.612,131.36:0.569802,0.569802:0.0,2.04694e-07,1.0	0/0:44:1.0:4,4:4-4,4-4:26,15,0,3:4,26:3,3:260.772:326.675,113.385:0.0,0.0:0.0,4.34561e-08,1.0
-chr1	7102309	.	CAACAACAACAACAACAA	.	.	.	END=7102326;RU=caa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.854997:6,6:6-6,6-6:6,17,0,2:6,6:5,2:191.637:366.612,131.36:0.0,0.0:2.48895e-15,0.0832395,0.916856	0/0:25:0.977648:6,6:6-6,6-6:9,14,0,2:6,9:4,1|5,1:178.927:326.675,113.385:0.0,0.0:7.69728e-23,0.0128845,0.987142
-chr1	7112567	.	TGCTTGCTTGCT	.	.	.	END=7112578;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.531923:3,3:1-3,1-3:4,11,0,0:3,4:NULL:119.182:366.612,131.36:0.851255,0.851255:8.10748e-13,0.289411,0.710593	0/0:4:0.610326:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.7523:326.675,113.385:0.0,0.0:3.60438e-13,0.15294,0.847136
-chr1	7112580	.	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC,TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	.	.	END=7112635;RU=tccc;PERIOD=4;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:10:0.0426785:10,10:9-12,9-12:0,9,0,0:NULL:NULL:84.7417:366.612,131.36:0.960855,0.960855:0.690324,0.283001,0.0267151	1/1:7:0.0395119:9,9:4-9,4-9:0,1,0,6:NULL:3,2|4,2|7,1|8,1:51.8568:326.675,113.385:1.05556,1.05556:1.0,0.0,0.0
-chr1	7112643	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7112706;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:13:0.0678086:10,10:8-11,8-11:0,10,0,2:NULL:7,1|10,1:107.562:366.612,131.36:0.725953,0.725953:1.0,0.0,0.0	2/2:4:0.0231414:17,17:11-17,11-17:0,1,0,3:NULL:5,1|16,1|17,1:30.1058:326.675,113.385:2.17123,2.17123:1.44707e-15,0.562026,0.438073
-chr1	7114417	.	TATTTATTTATT	.	.	.	END=7114428;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,11,0,3:3,21:2,3:207.032:366.612,131.36:0.0,0.0:0.0,1.37851e-06,1.0	0/0:29:0.999531:3,3:3-3,3-3:14,12,0,3:3,14:2,3:194.42:326.675,113.385:0.0,0.0:0.0,0.000209233,0.999795
-chr1	7114880	.	GTTTGTTTGTTT	.	.	.	END=7114891;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.99997:3,3:3-3,3-3:18,20,0,0:3,18:NULL:249.412:366.612,131.36:0.0,0.0:0.0,3.72643e-05,0.999964	0/0:51:1.0:3,3:3-3,3-3:39,10,0,2:3,39:2,2:260.0:326.675,113.385:0.0,0.0:0.0,5.14724e-12,1.0
-chr1	7114905	.	TGCCTGCCTGCCTGCCTGCC	.	.	.	END=7114924;RU=tgcc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999735:5,5:5-5,5-5:15,21,0,4:5,15:2,1|3,1|4,2:277.064:366.612,131.36:0.0,0.0:0.0,0.000197653,0.999804	0/0:60:1.0:5,5:5-5,5-5:32,19,0,9:5,32:3,5|4,4:364.328:326.675,113.385:0.0,0.0:0.0,7.61377e-10,1.0
-chr1	7114923	.	CCTTCCTTCCTT	.	.	.	END=7114934;RU=cctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999925:3,3:3-3,3-3:17,18,0,0:3,17:NULL:228.78:366.612,131.36:0.0,0.0:0.0,7.08889e-05,0.999932	0/0:53:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:294.268:326.675,113.385:0.0,0.0:0.0,1.28063e-10,1.0
-chr1	7115852	.	CAACAACAACAA	.	.	.	END=7115863;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.995236:4,4:4-4,4-4:11,29,0,2:4,11:3,1|4,1:335.829:366.612,131.36:0.0,0.0:4.37565e-40,0.00359673,0.996413	0/0:38:1.00001:4,4:4-10,4-10:21,16,0,0:4,21:NULL:229.452:326.675,113.385:2.98215,2.98215:0.0,5.39507e-06,0.999995
-chr1	7115879	.	AACCAACCAACCAACCAACC	.	.	.	END=7115898;RU=aacc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.996785:5,5:5-5,5-5:12,25,0,2:5,12:2,1|4,1:301.208:366.612,131.36:0.0,0.0:4.2689e-36,0.00270055,0.997306	0/0:34:0.999855:5,5:5-5,5-5:16,15,0,3:5,16:2,2|4,1:224.039:326.675,113.385:0.0,0.0:0.0,0.000123741,0.999879
-chr1	7116409	.	TTGTTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7116432;RU=ttg;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.00001:8,8:8-8,8-8:21,21,0,4:8,21:3,1|4,2|7,1:303.429:366.612,131.36:0.0,0.0:0.0,3.5402e-06,1.0	0/0:38:1.0:8,8:8-8,8-8:20,13,0,5:8,20:5,1|6,3|7,1:239.316:326.675,113.385:0.0,0.0:0.0,4.78065e-06,0.999995
-chr1	7117084	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=7117101;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999899:6,6:6-6,6-6:17,5,0,0:6,17:NULL:115.028:366.612,131.36:0.0,0.0:1e-45,7.1154e-05,0.999932	0/0:30:0.99988:6,6:6-6,6-6:16,11,0,3:6,16:5,3:187.085:326.675,113.385:0.0,0.0:4.64e-43,5.67073e-05,0.999947
-chr1	7117723	.	TTATTTATTTAT	.	.	.	END=7117734;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999944:3,3:3-3,3-3:17,19,0,0:3,17:NULL:241.297:366.612,131.36:0.0,0.0:0.0,4.02304e-05,0.999963	.
-chr1	7123652	.	TATATATATATATATATATATATATATATATA	TATATATATATATATATATA,TATATATATATATATATATATATATATA	.	.	END=7123683;RU=ta;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0256018:10,10:10-17,10-17:0,12,0,0:NULL:NULL:105.881:366.612,131.36:2.26765,2.26765:0.487018,0.42469,0.0883901	2/2:4:0.0176259:14,14:14-16,14-16:0,2,0,0:NULL:NULL:18.051:326.675,113.385:0.668445,0.668445:0.262568,0.499919,0.237526
-chr1	7123681	.	ATAGATAGATAGATAG	.	.	.	END=7123696;RU=atag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.308041:4,4:1-6,1-6:3,13,0,0:4,3:NULL:127.107:366.612,131.36:1.2509,1.2509:1.57402e-06,0.425549,0.574539	0/0:8:0.467441:4,4:4-4,4-4:3,3,0,2:4,3:3,2:52.7516:326.675,113.385:0.139319,0.139319:7.90252e-07,0.195937,0.804113
-chr1	7127713	.	ATGCATGCATGC	.	.	.	END=7127724;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.998886:3,3:3-3,3-3:13,9,0,0:3,13:NULL:135.151:366.612,131.36:0.0,0.0:4e-45,0.000670271,0.999332	0/0:22:0.999502:3,3:3-3,3-3:14,8,0,0:3,14:NULL:130.86:326.675,113.385:0.0,0.0:0.0,0.000298726,0.999704
-chr1	7129508	.	GCCTGCCTGCCT	.	.	.	END=7129519;RU=gcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:199.196:366.612,131.36:0.0,0.0:0.0,6.69502e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:188.359:326.675,113.385:0.0,0.0:0.0,8.97093e-07,1.0
-chr1	7129995	.	AGCAGCAGCAGC	.	.	.	END=7130006;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:23,24,0,2:4,23:3,2:327.467:366.612,131.36:0.0,0.0:0.0,7.46945e-07,1.0	0/0:54:1.0:4,4:4-4,4-4:40,14,0,0:4,40:NULL:287.299:326.675,113.385:0.0,0.0:0.0,8.80671e-12,1.0
-chr1	7138899	.	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC,CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTC	.	.	END=7138976;RU=cctctc;PERIOD=6;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:0.097887:10,12:10-13,10-13:0,9,0,12:NULL:3,2|4,2|5,1|6,2|7,2|8,1|10,2:167.19:366.612,131.36:1.17651,1.02837:0.410451,0.467083,0.122569	0/0:41:0.611322:13,13:11-13,11-13:4,15,0,22:13,4:3,2|4,5|5,2|6,3|7,1|8,3|9,1|10,1|11,2|12,2:308.531:326.675,113.385:0.474835,0.474835:6.11111e-08,0.261255,0.738746
-chr1	7139015	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7139054;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.777986:24,24:16-25,16-25:6,14,0,7:24,6:11,1|13,1|18,1|21,2|22,1|23,1:211.599:366.612,131.36:4.19713,4.19713:0.0,0.0157563,0.984278	0/1:52:0.615788:20,22:20-20,19-22:21,16,0,15:19,6|20,15:7,1|9,1|10,1|12,1|14,4|16,1|17,2|19,3|22,1:384.84:326.675,113.385:0.0,1.01136:3.32272e-17,0.000540725,0.999462
-chr1	7139855	.	CAACAACAACAA	.	.	.	END=7139866;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:25,18,0,4:4,25:3,4:286.567:366.612,131.36:0.0,0.0:0.0,1.39598e-07,1.0	0/0:53:1.0:4,4:4-4,4-4:29,22,0,2:4,29:3,2:332.281:326.675,113.385:0.0,0.0:0.0,8.94474e-09,1.0
-chr1	7141910	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7141955;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:68:0.944554:19,19:19-20,19-20:8,31,0,27:19,8:5,1|6,1|7,1|8,1|9,2|10,6|11,2|12,2|13,1|14,2|15,5|19,3:539.829:366.612,131.36:0.358902,0.358902:0.995439,0.00457489,4.49258e-22	0/0:78:0.828414:23,23:20-23,20-23:9,33,0,35:22,2|23,7:5,2|6,2|8,2|9,5|10,2|12,1|13,3|14,9|16,1|18,2|19,2|20,1|21,1|22,1|23,1:617.134:326.675,113.385:1.08749,1.08749:7.09369e-14,0.154714,0.845364
-chr1	7142903	.	TTTATTTATTTA	.	.	.	END=7142914;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999657:3,3:3-3,3-3:15,3,0,0:3,15:NULL:88.4566:366.612,131.36:0.0,0.0:4e-45,0.000127952,0.999873	0/0:25:1.00001:3,3:3-4,3-4:21,3,0,0:3,21:NULL:110.108:326.675,113.385:0.298675,0.298675:0.0,2.16394e-06,1.0
-chr1	7149749	.	GTGTGTGTGTGTGTGTGTGT	.	.	.	END=7149768;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999981:10,10:10-10,10-10:19,11,0,5:10,19:4,1|6,1|7,1|9,2:217.879:366.612,131.36:0.0,0.0:1.71733e-30,1.14603e-05,0.999988	0/0:61:1.0:10,10:10-10,10-10:33,18,0,9:10,33:5,2|6,2|7,2|9,3:372.271:326.675,113.385:0.0,0.0:0.0,1.25285e-09,1.0
-chr1	7150526	.	CAGCCAGCCAGC	.	.	.	END=7150537;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:217.341:366.612,131.36:0.0,0.0:0.0,2.87344e-06,1.0	0/0:55:1.0:3,3:3-3,3-3:42,13,0,0:3,42:NULL:281.387:326.675,113.385:0.0,0.0:0.0,1.12619e-12,1.0
-chr1	7151580	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7151625;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.907183:22,22:21-23,21-23:13,20,0,7:21,3|22,10:5,1|8,1|10,1|13,1|15,1|17,1|22,1:305.099:366.612,131.36:0.38423,0.38423:0.996535,0.00347349,1.51364e-09	1/0:46:0.948189:22,23:21-23,22-23:10,15,0,21:21,2|22,3|23,5:5,2|7,1|8,1|11,2|12,2|13,2|14,3|15,1|17,1|19,1|20,1|22,4:357.742:326.675,113.385:0.554102,0.317759:0.00154081,0.961704,0.0368281
-chr1	7152237	.	GTTGTTGTTGTTGTTGTTGTTGTTGTTGTT	.	.	.	END=7152266;RU=gtt;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999992:10,10:10-10,10-10:19,15,0,11:10,19:4,2|5,3|7,1|8,2|9,3:308.082:366.612,131.36:0.0,0.0:4.55911e-36,1.42231e-05,0.999987	0/0:42:1.0:10,10:10-10,10-10:24,11,0,7:10,24:3,1|6,1|8,2|9,3:248.698:326.675,113.385:0.0,0.0:0.0,2.10796e-07,1.0
-chr1	7157339	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7157358;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.946256:4,4:1-4,1-4:8,27,0,4:4,8:2,1|3,3:311.435:366.612,131.36:0.5093,0.5093:4.82258e-26,0.0315994,0.968457	0/0:31:0.999938:4,4:4-4,4-4:17,12,0,2:4,17:3,2:192.613:326.675,113.385:0.0,0.0:0.0,4.32609e-05,0.999957
-chr1	7157442	.	TTTTGGTTTTTGGTTTTTGGT	.	.	.	END=7157462;RU=ttttggt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,15,0,0:3,23:NULL:235.917:366.612,131.36:0.0,0.0:0.0,1.75816e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:175.786:326.675,113.385:0.0,0.0:0.0,8.52949e-06,0.999994
-chr1	7157813	.	CAAACAAACAAACAAA	.	.	.	END=7157828;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999842:4,4:4-4,4-4:16,10,0,3:4,16:3,3:172.962:366.612,131.36:0.0,0.0:0.0,6.26255e-05,0.99994	0/0:52:1.0:4,4:4-4,4-4:23,24,0,5:4,23:3,5:345.664:326.675,113.385:0.0,0.0:0.0,5.28929e-07,1.0
-chr1	7164237	.	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	TCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT	.	.	END=7164331;RU=tctct;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.0866162:21,21:20-23,20-23:0,17,0,24:NULL:2,2|5,1|6,1|7,3|9,4|10,4|11,1|12,1|13,1|16,1|17,1|18,2|19,1|21,1:332.371:366.612,131.36:1.2242,1.2242:0.0,0.0,1.0	0/0:40:0.134004:19,19:11-19,11-19:2,20,0,17:19,2:3,2|5,1|6,1|7,3|8,1|9,1|10,1|12,1|13,1|14,2|15,2|18,1:316.316:326.675,113.385:2.63675,2.63675:0.000196628,0.75379,0.246027
-chr1	7165649	.	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	.	END=7165672;RU=tttgtt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999941:4,4:4-4,4-4:17,14,0,4:4,17:3,4:228.493:366.612,131.36:0.0,0.0:0.0,3.76231e-05,0.999964	0/0:38:0.997965:4,4:4-4,4-4:11,22,0,5:4,11:3,5:280.981:326.675,113.385:0.0,0.0:2.16762e-36,0.00154586,0.998459
-chr1	7167675	.	TTTGTTTGTTTG	.	.	.	END=7167686;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99977:3,3:3-3,3-3:15,10,0,2:3,15:2,2:168.111:366.612,131.36:0.0,0.0:0.0,9.43e-05,0.999909	0/0:20:0.999928:3,3:3-3,3-3:17,3,0,0:3,17:NULL:92.8925:326.675,113.385:0.0,0.0:0.0,3.49392e-05,0.999964
-chr1	7172621	.	AAAAGAAAAGAAAAG	.	.	.	END=7172635;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:23,16,0,2:3,23:2,2:246.775:366.612,131.36:0.0,0.0:0.0,4.23121e-07,1.0	0/0:41:1.0:3,3:3-3,3-3:30,9,0,2:3,30:2,2:218.999:326.675,113.385:0.0,0.0:0.0,3.21717e-09,1.0
-chr1	7173577	.	ACACACACACAC	.	.	.	END=7173588;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:6,6:6-6,6-6:28,16,0,0:6,28:NULL:253.69:366.612,131.36:0.0,0.0:0.0,2.40619e-08,1.0	0/0:49:1.0:6,6:6-6,6-6:35,13,0,0:6,35:NULL:256.223:326.675,113.385:0.0990099,0.0990099:0.0,3.04857e-10,1.0
-chr1	7179754	.	AATAATAATAATAAT	.	.	.	END=7179768;RU=aat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999533:5,5:5-5,5-5:14,12,0,3:5,14:3,1|4,2:185.772:366.612,131.36:0.0,0.0:1.8076e-36,0.000174118,0.999827	0/0:26:0.998277:5,5:4-5,4-5:12,11,0,2:5,12:4,2:166.309:326.675,113.385:0.36513,0.36513:2.64615e-31,0.00105222,0.998952
-chr1	7183424	.	AAGAAAGAAAGAAAGA	.	.	.	END=7183439;RU=aaga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999955:4,4:3-4,3-4:16,14,0,4:4,16:2,1|3,3:226.025:366.612,131.36:0.284901,0.284901:0.0,2.46733e-05,0.999978	0/0:48:1.0:4,4:4-4,4-4:35,9,0,3:4,35:2,1|3,2:247.573:326.675,113.385:0.0,0.0:0.0,9.05384e-11,1.0
-chr1	7187849	.	TGTGTGTGTGTGTG	.	.	.	END=7187862;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:7,7:7-8,7-8:20,17,0,0:7,20:NULL:239.511:366.612,131.36:0.284901,0.284901:1.26e-43,8.33049e-06,0.999994	0/0:23:0.999325:7,7:7-7,7-7:14,9,0,0:7,14:NULL:139.81:326.675,113.385:0.0,0.0:6.28781e-31,0.000398072,0.999605
-chr1	7189612	.	AATCAATCAATC	.	.	.	END=7189623;RU=aatc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:32,14,0,2:3,32:2,2:267.131:366.612,131.36:0.0,0.0:0.0,1.29813e-09,1.0	0/0:26:0.999995:3,3:3-4,3-4:19,6,0,0:3,19:NULL:132.971:326.675,113.385:0.382696,0.382696:0.0,1.15177e-05,0.999987
-chr1	7196731	.	GGGTGGGTGGGT	.	.	.	END=7196742;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.259324:3,3:3-6,3-6:2,10,0,0:3,2:NULL:94.8097:366.612,131.36:1.03142,1.03142:3.4255e-06,0.28281,0.717196	0/0:23:0.265731:3,3:2-6,2-6:2,21,0,0:3,2:NULL:186.44:326.675,113.385:0.686818,0.686818:5.23069e-06,0.314433,0.685577
-chr1	7200628	.	TATTTATTTATT	.	.	.	END=7200639;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:2-3,2-3:20,23,0,0:3,20:NULL:284.103:366.612,131.36:0.284901,0.284901:0.0,5.16915e-06,0.999995	0/0:11:0.93621:3,3:3-3,3-3:7,4,0,0:3,7:NULL:63.2243:326.675,113.385:0.0,0.0:1.08546e-20,0.0320985,0.967963
-chr1	7202878	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7202915;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:0.972029:19,19:18-19,18-19:20,22,0,10:18,5|19,15:5,1|6,1|9,1|10,1|12,1|13,2|16,1|17,1|18,1:384.392:366.612,131.36:0.438559,0.438559:6.84937e-17,0.027957,0.972098	0/0:47:0.474592:19,19:19-20,19-20:11,19,0,16:19,9|20,2:4,1|6,1|8,2|9,1|11,4|13,2|16,1|17,2|18,2:353.673:326.675,113.385:0.478127,0.478127:1.97729e-13,0.00220667,0.997799
-chr1	7211598	.	TTAATTAATTAA	.	.	.	END=7211609;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:217.659:366.612,131.36:0.0,0.0:0.0,3.9667e-06,0.999995	0/0:22:0.999911:3,3:3-3,3-3:16,6,0,0:3,16:NULL:121.627:326.675,113.385:0.0,0.0:0.0,5.47336e-05,0.999948
-chr1	7211666	.	TTTATTTATTTA	.	.	.	END=7211677;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:21,17,0,4:3,21:2,4:261.473:366.612,131.36:0.0,0.0:0.0,1.59179e-06,1.0	0/0:40:1.0:3,3:3-3,3-3:22,18,0,0:3,22:NULL:247.566:326.675,113.385:0.0,0.0:0.0,1.2383e-06,1.0
-chr1	7211691	.	ATTGATTGATTG	.	.	.	END=7211702;RU=attg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:41,9,0,3:3,41:2,3:263.741:366.612,131.36:0.0,0.0:0.0,2.13209e-12,1.0	0/0:47:1.0:3,3:3-3,3-3:29,16,0,2:3,29:2,2:269.281:326.675,113.385:0.0,0.0:0.0,6.33694e-09,1.0
-chr1	7217580	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=7217607;RU=ct;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.75922:15,15:13-15,13-15:11,21,0,2:14,3|15,8:7,1|13,1:255.373:366.612,131.36:0.573745,0.573745:2.97386e-18,0.00496799,0.995046	0/0:29:0.860925:14,14:10-15,10-15:7,15,0,4:14,7:6,1|9,1|10,1|12,1:198.8:326.675,113.385:2.02736,2.02736:1.63669e-09,0.0777891,0.922306
-chr1	7219811	.	ACACACACACACACACACACACACACAC	.	.	.	END=7219838;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.561237:14,14:11-15,11-15:12,13,0,3:13,3|14,9:7,1|8,1|11,1:197.929:366.612,131.36:1.20776,1.20776:9.43812e-11,0.436715,0.563388	0/0:38:0.999919:14,14:14-14,14-14:18,8,0,9:14,18:6,1|7,3|8,2|9,2|14,1:222.087:326.675,113.385:0.0990099,0.0990099:1.05852e-33,3.29776e-05,0.99997
-chr1	7226245	.	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	GGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGGGGCAGG	.	.	END=7226304;RU=ggcagg;PERIOD=6;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:0.558807:9,9:5-9,5-9:5,25,0,7:9,5:3,3|4,1|6,1|8,2:308.032:366.612,131.36:1.05035,1.05035:0.971675,0.0283795,9.27092e-13	0/0:39:0.550706:10,10:3-10,3-10:3,20,0,13:10,3:2,1|3,1|4,2|6,1|7,1|8,3|9,4:288.409:326.675,113.385:1.81796,1.81796:2.69798e-05,0.369363,0.630662
-chr1	7227370	.	AAATAAAATAAAATAAAATAAAATA	.	.	.	END=7227394;RU=aaata;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.994263:5,5:5-5,5-5:11,17,0,7:5,11:2,2|3,4|4,1:255.27:366.612,131.36:0.0,0.0:8.55266e-37,0.00397439,0.996036	0/0:37:1.0:5,5:5-5,5-5:23,10,0,4:5,23:3,2|4,2:209.855:326.675,113.385:0.0,0.0:0.0,4.30756e-07,1.0
-chr1	7240279	.	ATTTATTTATTT	.	.	.	END=7240290;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:22,10,0,0:3,22:NULL:175.037:366.612,131.36:0.0,0.0:0.0,1.48899e-06,1.0	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:153.32:326.675,113.385:0.0,0.0:0.0,1.07333e-05,0.999993
-chr1	7240750	.	ATGCATGCATGC	.	.	.	END=7240761;RU=atgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999371:3,3:3-3,3-3:14,14,0,0:3,14:NULL:180.484:366.612,131.36:0.0,0.0:9.596e-42,0.00036374,0.999637	0/0:21:0.997102:3,3:3-3,3-3:12,9,0,0:3,12:NULL:128.833:326.675,113.385:0.0,0.0:1.46053e-35,0.00175663,0.998247
-chr1	7241788	.	TCTCTCTCTCTCTC	.	.	.	END=7241801;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.995579:7,7:7-7,7-7:11,12,0,4:7,11:5,1|6,3:188.603:366.612,131.36:0.0,0.0:5.84163e-25,0.00174596,0.998261	0/0:21:0.99991:7,7:7-7,7-7:17,4,0,0:7,17:NULL:106.626:326.675,113.385:0.0,0.0:1.80641e-38,5.65364e-05,0.999947
-chr1	7245079	.	ATAATAATAATA	.	.	.	END=7245090;RU=ata;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998856:4,4:4-4,4-4:13,13,0,0:4,13:NULL:167.994:366.612,131.36:0.0,0.0:8.78662e-34,0.000611726,0.999392	0/0:21:0.946898:4,4:4-4,4-4:8,13,0,0:4,8:NULL:150.095:326.675,113.385:0.0,0.0:7.85469e-21,0.0389249,0.961143
-chr1	7247751	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7247798;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:51:0.868045:24,25:22-24,22-25:14,20,0,16:22,3|23,3|24,8:6,2|7,1|8,1|9,2|11,1|12,1|13,1|16,1|17,1|18,3|20,1|25,1:402.153:366.612,131.36:0.803751,1.19724:2.11915e-11,0.00923074,0.990791	0/2:31:0.312892:24,29:12-24,12-29:5,11,0,13:24,5:6,2|7,1|8,1|9,1|10,1|12,1|13,2|15,1|19,1|21,1|29,1:231.449:326.675,113.385:4.3687,7.89588:8.50332e-13,1.16424e-06,1.0
-chr1	7253471	.	TAAATAAATAAA	.	.	.	END=7253482;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999982:3,3:3-3,3-3:18,10,0,0:3,18:NULL:163.726:366.612,131.36:0.0,0.0:0.0,2.50208e-05,0.999978	0/0:17:0.995584:3,3:3-3,3-3:11,6,0,0:3,11:NULL:97.4252:326.675,113.385:0.0,0.0:3.59897e-33,0.00242419,0.997585
-chr1	7253491	.	ATATATATATATAT	.	.	.	END=7253504;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.998169:7,7:7-7,7-7:13,11,0,0:7,13:NULL:153.192:366.612,131.36:0.0,0.0:3.80595e-25,0.00114606,0.99886	0/0:19:0.999227:7,7:7-7,7-7:14,5,0,0:7,14:NULL:101.671:326.675,113.385:0.0,0.0:1.73846e-27,0.000431609,0.999569
-chr1	7254256	.	CCCACCCACCCA	.	.	.	END=7254267;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:28,17,0,0:3,28:NULL:260.773:366.612,131.36:0.0,0.0:0.0,1.17482e-08,1.0	0/0:22:0.999886:3,3:3-3,3-3:16,6,0,0:3,16:NULL:117.393:326.675,113.385:0.0,0.0:0.0,7.30345e-05,0.999926
-chr1	7256849	.	ATTTATTTATTT	.	.	.	END=7256860;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:21,16,0,0:3,21:NULL:233.195:366.612,131.36:0.0,0.0:0.0,4.97224e-06,0.999995	0/0:43:1.0:3,3:3-3,3-3:29,14,0,0:3,29:NULL:241.71:326.675,113.385:0.0,0.0:0.0,1.21702e-08,1.0
-chr1	7260017	.	TATTATTATTATTATTATTATTATTAT	TATTATTATTATTATTATTATTATTATTAT	.	.	END=7260043;RU=tat;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:0.998782:10,10:7-10,7-10:14,29,0,7:10,14:3,2|5,2|7,1|8,1|9,1:388.096:366.612,131.36:1.06766,1.06766:3.65611e-39,0.000746253,0.999256	0/0:35:0.999432:9,9:9-10,9-10:15,13,0,5:9,15:4,2|6,1|8,2:225.477:326.675,113.385:0.322657,0.322657:6.9475e-26,0.000247089,0.999757
-chr1	7267550	.	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7267573;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:72:0.991578:12,12:11-12,11-12:33,30,0,8:11,6|12,25|13,2:5,1|6,1|7,1|8,1|11,4:493.028:366.612,131.36:0.452422,0.452422:6.60644e-32,0.00844298,0.991577	0/0:42:0.999214:12,12:11-12,11-12:24,10,0,8:11,3|12,21:7,1|8,1|9,2|10,2|11,2:263.425:326.675,113.385:0.169767,0.169767:3.8886e-28,0.000792244,0.999211
-chr1	7269602	.	TGTTTGTTTGTT	.	.	.	END=7269613;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:3,3:3-3,3-3:36,27,0,0:3,36:NULL:388.619:366.612,131.36:0.0,0.0:0.0,4.76789e-11,1.0	0/0:53:1.0:3,3:3-3,3-3:30,23,0,0:3,30:NULL:328.499:326.675,113.385:0.0,0.0:0.0,1.00681e-08,1.0
-chr1	7269942	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7269983;RU=gt;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:71:0.289082:21,21:21-31,21-31:23,27,0,21:20,2|21,18|22,3:5,1|6,4|7,2|9,1|10,1|11,3|12,1|14,4|15,1|20,1|21,1|29,1:540.445:366.612,131.36:4.00162,4.00162:2.35062e-28,2.28465e-05,0.999979	0/0:58:0.957569:21,21:21-22,21-22:21,21,0,14:19,2|21,16|22,3:4,1|5,2|6,2|7,1|11,2|13,1|14,1|15,2|17,1|18,1:410.119:326.675,113.385:0.480581,0.480581:1.11615e-18,0.00176366,0.99824
-chr1	7281471	.	AGCAGCAGCAGC	.	.	.	END=7281482;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,17,0,0:4,26:NULL:253.314:366.612,131.36:0.0,0.0:0.0,1.49434e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:27,12,0,2:4,27:3,2:231.62:326.675,113.385:0.0,0.0:0.0,4.11805e-08,1.0
-chr1	7281705	.	ACCCACCCACCC	.	.	.	END=7281716;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.921271:3,3:1-3,1-3:8,14,0,0:3,8:NULL:161.358:366.612,131.36:0.339533,0.339533:5.11599e-23,0.0587992,0.941284	0/0:24:0.994423:3,3:3-3,3-3:11,13,0,0:3,11:NULL:168.602:326.675,113.385:0.0,0.0:1.21422e-32,0.00349456,0.996513
-chr1	7287856	.	CTGCTGCTGCTG	.	.	.	END=7287867;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:55:1.00001:4,4:4-4,4-4:22,31,0,2:4,22:3,2:387.235:366.612,131.36:0.0,0.0:0.0,1.92848e-06,1.0	0/0:49:1.0:4,4:4-4,4-4:28,19,0,2:4,28:3,2:295.475:326.675,113.385:0.0,0.0:0.0,1.55583e-08,1.0
-chr1	7289516	.	AACAACAACAACAACAACAACAAC	.	.	.	END=7289539;RU=aac;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999984:8,8:7-8,7-8:18,22,0,8:8,18:4,1|5,2|7,4|8,1:337.307:366.612,131.36:0.195027,0.195027:0.0,7.08475e-06,0.999994	0/0:64:1.0:8,8:8-8,8-8:32,21,0,10:8,32:4,3|5,2|6,1|7,4:395.626:326.675,113.385:0.0,0.0:0.0,7.39514e-10,1.0
-chr1	7295421	.	AAATAAATAAATAAATAAATAAAT	.	.	.	END=7295444;RU=aaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997089:6,6:6-6,6-6:12,14,0,2:6,12:3,2:198.845:366.612,131.36:0.0,0.0:1.10866e-29,0.00180377,0.998201	0/0:20:0.985667:6,6:6-6,6-6:10,8,0,2:6,10:2,1|3,1:133.664:326.675,113.385:0.0,0.0:8.02214e-25,0.0101885,0.989835
-chr1	7300043	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7300082;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.791622:21,22:21-22,21-22:5,21,0,11:21,2|22,3:5,1|8,2|9,2|16,1|17,1|19,1|20,2|21,1:300.216:366.612,131.36:0.489073,0.253975:2.05885e-32,0.0041394,0.99587	0/3:31:0.271667:20,31:20-21,20-33:5,14,0,11:20,5:7,1|8,2|10,2|11,1|13,1|15,1|16,1|18,1|30,1:249.731:326.675,113.385:0.311527,5.17131:1.2747e-12,9.41717e-07,1.0
-chr1	7308819	.	CTTCCTTCCTTC	.	.	.	END=7308830;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:19,17,0,0:3,19:NULL:235.2:366.612,131.36:0.0,0.0:0.0,8.92855e-06,0.999994	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:176.634:326.675,113.385:0.0,0.0:0.0,5.62191e-06,0.999995
-chr1	7311860	.	AATAAATAAATA	.	.	.	END=7311871;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:243.629:366.612,131.36:0.0,0.0:0.0,1.32772e-06,1.0	0/0:35:1.00001:3,3:3-3,3-3:20,13,0,2:3,20:2,2:212.639:326.675,113.385:0.0,0.0:0.0,3.8687e-06,1.0
-chr1	7312335	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7312382;RU=ga;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:40:0.627028:26,27:26-27,26-27:6,19,0,15:26,3|27,3:5,1|6,1|10,1|11,1|12,1|14,1|17,2|18,2|20,1|21,2|24,1|26,1:327.935:366.612,131.36:0.499387,0.270063:1.13217e-27,0.00412896,0.995884	0/0:24:0.366625:24,24:21-25,21-25:4,11,0,7:24,4:4,1|9,1|13,1|19,2|20,2:184.691:326.675,113.385:1.32681,1.32681:3.50187e-05,0.22487,0.775126
-chr1	7317649	.	TATATATATATATATATATATATATATATATATA	TATATATATA	.	.	END=7317682;RU=ta;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00159136:5,5:1-5,1-5:0,4,0,0:NULL:NULL:38.0264:366.612,131.36:1.9367,1.9367:0.214444,0.566663,0.218941	0/0:5:0.214537:17,17:12-17,12-17:3,1,0,0:17,3:NULL:23.9926:326.675,113.385:2.46433,2.46433:0.000415716,0.495034,0.504577
-chr1	7319965	.	TGTTTTGTTTTGTTT	.	.	.	END=7319979;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:32,20,0,3:3,32:2,3:325.88:366.612,131.36:0.0990099,0.0990099:0.0,9.31041e-10,1.0	0/0:38:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.419:326.675,113.385:0.0,0.0:0.0,1.10491e-08,1.0
-chr1	7320026	.	CAACAACAACAA	.	.	.	END=7320037;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:23,25,0,0:4,23:NULL:313.598:366.612,131.36:0.0,0.0:0.0,1.41139e-06,1.0	0/0:45:1.0:4,4:4-4,4-4:35,8,0,2:4,35:3,2:219.811:326.675,113.385:0.0,0.0:0.0,1.13476e-10,1.0
-chr1	7320521	.	TACATACATACA	.	.	.	END=7320532;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999718:3,3:3-3,3-3:15,13,0,4:3,15:2,4:208.139:366.612,131.36:0.0,0.0:0.0,8.72314e-05,0.999917	0/0:24:0.999363:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.282:326.675,113.385:0.0,0.0:0.0,0.000375133,0.999628
-chr1	7321482	.	ACACACACACACAC	.	.	.	END=7321495;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:7,7:7-7,7-7:23,18,0,6:7,23:5,2|6,3|7,1:303.377:366.612,131.36:0.0,0.0:0.0,1.80126e-07,1.0	0/0:36:0.999919:7,7:6-7,6-7:17,16,0,2:7,17:5,1|6,1:226.164:326.675,113.385:0.169767,0.169767:3.24696e-33,4.78734e-05,0.999955
-chr1	7322714	.	CCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTCCCCTTC	.	.	.	END=7322755;RU=cccttc;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.996653:7,7:7-7,7-7:11,11,0,3:7,11:5,1|6,1|7,1:170.747:366.612,131.36:0.0,0.0:3.41976e-34,0.00110666,0.998898	0/0:13:0.961654:7,7:7-11,7-11:9,0,0,3:7,9:3,1|4,2:58.7664:326.675,113.385:1.93776,1.93776:1.54565e-21,0.0115338,0.988493
-chr1	7322758	.	CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	CCCTCCCTCCCTCCCTCCCTCCCTCCCT,CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	.	.	END=7322825;RU=ccct;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:20:0.0513381:12,12:7-13,7-13:0,12,0,8:NULL:4,1|5,2|7,1|9,2|10,1|12,1:166.878:366.612,131.36:1.53046,1.53046:1.0,0.0,0.0	1/1:3:0.034616:7,7:4-7,4-7:0,0,0,3:NULL:4,1|5,1|7,1:21.8234:326.675,113.385:1.0297,1.0297:1.0,0.0,0.0
-chr1	7322843	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7322906;RU=tctt;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.722905:17,17:17-17,17-17:5,11,0,5:17,5:3,1|8,1|10,1|13,1|15,1:163.352:366.612,131.36:0.0,0.0:5.502e-11,0.0988771,0.901225	0/0:6:0.392285:16,16:16-16,16-16:3,0,0,3:16,3:3,1|5,1|9,1:35.5546:326.675,113.385:0.0,0.0:3.24348e-05,0.308657,0.691323
-chr1	7328752	.	ACCCACCCACCC	.	.	.	END=7328763;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.613872:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6549:366.612,131.36:0.0,0.0:3.22758e-10,0.15496,0.845119	0/0:11:0.757354:3,3:3-3,3-3:5,6,0,0:3,5:NULL:74.6943:326.675,113.385:0.19802,0.19802:2.47669e-12,0.128837,0.871257
-chr1	7336314	.	TTTGTTTGTTTGTTTG	.	.	.	END=7336329;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999524:4,4:4-4,4-4:14,13,0,4:4,14:3,4:202.302:366.612,131.36:0.0,0.0:0.0,0.000197975,0.999804	0/0:42:1.0:4,4:4-4,4-4:23,15,0,4:4,23:3,4:255.565:326.675,113.385:0.0,0.0:0.0,3.73456e-07,1.0
-chr1	7336498	.	TTGCTTGCTTGC	.	.	.	END=7336509;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99571:3,3:3-3,3-3:11,15,0,0:3,11:NULL:182.109:366.612,131.36:0.0,0.0:1.17594e-37,0.00278756,0.997222	0/0:46:1.0:3,3:3-3,3-3:26,20,0,0:3,26:NULL:287.118:326.675,113.385:0.0,0.0:0.0,8.91218e-08,1.0
-chr1	7338572	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7338615;RU=ga;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.421656:26,26:25-27,25-27:5,18,0,10:25,2|26,3:5,2|8,2|11,1|15,1|20,1|21,1|25,1|26,1:269.903:366.612,131.36:0.77215,0.77215:0.0,0.0,1.0	0/0:26:0.775999:22,22:15-23,15-23:9,13,0,2:21,2|22,7:8,1|18,1:187.222:326.675,113.385:3.54718,3.54718:4.10557e-09,0.194642,0.805411
-chr1	7338650	.	GAGAGAGAGAGA	.	.	.	END=7338661;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:199.444:366.612,131.36:0.0,0.0:0.0,7.39755e-06,0.999994	0/0:31:0.677083:6,6:5-6,5-6:16,15,0,0:5,2|6,14:NULL:213.658:326.675,113.385:0.481803,0.481803:3.46657e-31,0.322893,0.677118
-chr1	7339588	.	GGAGGGAGGGAG	.	.	.	END=7339599;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:20,15,0,6:3,20:2,6:258.753:366.612,131.36:0.0,0.0:0.0,1.87913e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:25,15,0,3:3,25:2,3:260.179:326.675,113.385:0.0,0.0:0.0,1.76217e-07,1.0
-chr1	7342098	.	CTTCCTTCCTTC	.	.	.	END=7342109;RU=cttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:239.784:366.612,131.36:0.0,0.0:0.0,1.00833e-05,0.999993	0/0:27:1.00001:3,3:3-3,3-3:21,6,0,0:3,21:NULL:140.672:326.675,113.385:0.0,0.0:0.0,3.06032e-06,1.0
-chr1	7346787	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7346820;RU=ga;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.835079:15,15:15-16,15-16:15,9,0,4:14,2|15,11|16,2:8,1|11,1|13,1|14,1:187.666:366.612,131.36:0.478127,0.478127:0.998868,0.00113628,2.39974e-18	0/2:40:0.820877:17,18:17-17,17-18:14,14,0,11:17,11|18,3:6,1|8,1|9,1|10,1|12,4|16,3:286.675:326.675,113.385:0.0,0.51751:2.57552e-17,0.000174086,0.999827
-chr1	7348276	.	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	.	.	.	END=7348327;RU=ctcc;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.301025:13,13:10-13,10-13:2,18,0,11:13,2:2,1|3,2|5,2|6,2|7,1|11,2|12,1:255.873:366.612,131.36:0.744223,0.744223:4.55782e-05,0.480577,0.519467	0/0:21:0.299182:13,13:6-13,6-13:3,7,0,10:13,3:2,2|4,2|5,1|6,1|7,1|9,3:147.626:326.675,113.385:3.34451,3.34451:3.97709e-07,0.52238,0.477716
-chr1	7358397	.	GAACGAACGAAC	.	.	.	END=7358408;RU=gaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:19,21,0,2:3,19:2,2:283.523:366.612,131.36:0.0,0.0:0.0,7.11925e-06,0.999994	0/0:36:0.999979:3,3:2-3,2-3:18,17,0,0:3,18:NULL:228.634:326.675,113.385:0.382696,0.382696:0.0,2.71399e-05,0.999972
-chr1	7358417	.	GGAGGGAGGGAG	.	.	.	END=7358428;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999972:3,3:3-3,3-3:18,22,0,0:3,18:NULL:271.15:366.612,131.36:0.0,0.0:0.0,2.61653e-05,0.999978	0/0:36:0.999992:3,3:3-3,3-3:18,15,0,3:3,18:2,3:231.967:326.675,113.385:0.0,0.0:0.0,1.52545e-05,0.999986
-chr1	7358698	.	GTGTGTGTGTGTGT	.	.	.	END=7358711;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999251:7,7:6-7,6-7:14,24,0,2:7,14:5,1|6,1:292.536:366.612,131.36:0.253975,0.253975:2.38892e-31,0.000399694,0.999605	0/0:42:1.0:7,7:7-7,7-7:20,19,0,3:7,20:5,3:276.71:326.675,113.385:0.0,0.0:3.9e-44,6.48288e-06,0.999995
-chr1	7360103	.	GCTGGCTGGCTG	.	.	.	END=7360114;RU=gctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:145.701:366.612,131.36:0.0,0.0:0.0,1.49409e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:20,19,0,2:3,20:2,2:266.982:326.675,113.385:0.0,0.0:0.0,8.91998e-06,0.999994
-chr1	7364232	.	AACAACAACAACAACAACAACAACAAC	.	.	.	END=7364258;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.99988:9,9:9-9,9-9:16,18,0,8:9,16:4,2|5,3|6,1|7,1|8,1:294.402:366.612,131.36:0.0,0.0:1e-45,8.34886e-05,0.999918	0/0:37:0.998618:9,9:4-9,4-9:23,4,0,9:8,2|9,21:4,2|5,3|7,1|8,3:207.845:326.675,113.385:1.27865,1.27865:0.0,0.00139733,0.998609
-chr1	7369828	.	TTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGT	.	.	.	END=7369877;RU=ttggt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.988251:10,10:10-10,10-10:9,17,0,11:10,9:3,1|4,2|5,1|6,3|7,1|8,1|9,2:267.282:366.612,131.36:0.0990099,0.0990099:4.56816e-24,0.00662809,0.993385	0/0:42:0.983934:10,10:10-10,10-10:10,17,0,15:10,10:2,1|3,2|4,1|5,4|6,3|8,4:309.264:326.675,113.385:0.0,0.0:4.08607e-26,0.0115998,0.988427
-chr1	7370253	.	TCTATCTATCTATCTATCTATCTATCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7370288;RU=tcta;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999473:9,9:8-9,8-9:15,19,0,5:9,15:2,1|3,1|5,1|7,1|8,1:273.082:366.612,131.36:0.236383,0.236383:8.91454e-31,0.000343567,0.999659	1/1:32:0.987571:10,10:9-10,9-10:10,15,0,6:10,10:3,2|6,1|9,3:229.725:326.675,113.385:0.382696,0.382696:0.0,0.00361669,0.996391
-chr1	7372684	.	GTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7372697;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.992972:7,7:7-7,7-7:11,7,0,0:7,11:NULL:109.451:366.612,131.36:0.0,0.0:1.69996e-23,0.00378935,0.996218	0/1:26:0.275371:7,17:7-7,6-17:20,4,0,2:6,2|7,18:5,1|17,1:155.27:326.675,113.385:0.0,4.95623:4.12548e-36,0.000283499,0.99972
-chr1	7373113	.	AATAATAATAAT	.	.	.	END=7373124;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99978:4,4:4-4,4-4:15,9,0,2:4,15:3,2:162.12:366.612,131.36:0.0,0.0:7.85066e-39,9.29249e-05,0.99991	0/0:20:0.999906:4,4:4-4,4-4:17,3,0,0:4,17:NULL:97.0953:326.675,113.385:0.0,0.0:1.44e-43,6.04494e-05,0.999941
-chr1	7374196	.	AAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7374220;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:5,5:5-5,5-5:21,10,0,6:5,21:2,1|4,5:216.13:366.612,131.36:0.0,0.0:0.0,7.71321e-07,1.0	0/0:40:1.0:5,5:5-5,5-5:29,5,0,6:5,29:4,6:207.505:326.675,113.385:0.0,0.0:0.0,5.08972e-09,1.0
-chr1	7375130	.	AAGAAGAAGAAG	.	.	.	END=7375141;RU=aag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:4,4:4-4,4-4:23,17,0,0:4,23:NULL:243.004:366.612,131.36:0.0,0.0:0.0,1.47844e-06,1.0	0/0:27:0.999994:4,4:3-4,3-4:19,7,0,0:4,19:NULL:139.553:326.675,113.385:0.236383,0.236383:0.0,1.34472e-05,0.999987
-chr1	7377589	.	GTGTGTGTGTGT	.	.	.	END=7377600;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.00001:6,6:6-6,6-6:22,23,0,0:6,22:NULL:305.402:366.612,131.36:0.0,0.0:0.0,2.00292e-06,1.0	0/0:33:0.999991:6,6:6-6,6-6:18,13,0,2:6,18:5,2:200.378:326.675,113.385:0.0,0.0:1e-45,1.50686e-05,0.999986
-chr1	7378672	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7378691;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:5,5:5-5,5-5:22,17,0,2:5,22:3,1|4,1:259.382:366.612,131.36:0.0,0.0:0.0,1.4993e-06,1.0	0/0:27:0.999944:5,5:5-5,5-5:17,7,0,3:5,17:3,1|4,2:158.67:326.675,113.385:0.0,0.0:0.0,2.59651e-05,0.999978
-chr1	7379008	.	GTGTGTGTGTGT	GTGTGTGTGT	.	.	END=7379019;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:1.0:5,6:5-5,6-6:21,15,0,0:4,2|5,11|6,8:NULL:244.131:366.612,131.36:0.0990099,0.220506:2.68448e-10,1.0,1.29073e-16	0/0:37:0.997376:6,6:2-6,2-6:22,11,0,2:5,2|6,20:4,1|5,1:210.677:326.675,113.385:1.55789,1.55789:2.05557e-35,0.00263789,0.997368
-chr1	7379032	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACA	.	.	END=7379059;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:47:0.999806:13,13:13-13,13-13:25,16,0,5:12,3|13,22:8,3|10,1|11,1:304.336:366.612,131.36:0.0,0.0:1.0,1.76595e-06,4.13362e-22	0/0:39:0.999089:14,14:10-14,10-14:22,10,0,6:13,3|14,19:6,1|7,1|8,1|10,2|11,1:238.742:326.675,113.385:1.24776,1.24776:1.8e-21,0.000919131,0.999082
-chr1	7382087	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7382106;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.996054:4,4:4-4,4-4:10,24,0,3:4,10:3,3:276.813:366.612,131.36:0.0,0.0:1.88766e-33,0.00203106,0.997974	0/0:19:0.993888:4,4:4-4,4-4:11,8,0,0:4,11:NULL:112.713:326.675,113.385:0.0,0.0:4.26474e-36,0.00449055,0.995522
-chr1	7384157	.	CACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=7384198;RU=ca;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:66:0.746841:22,23:22-22,21-23:13,30,0,22:21,2|22,8|23,3:5,1|6,1|7,1|9,1|10,2|11,1|14,2|15,2|16,4|18,2|20,2|21,1|22,2:518.97:366.612,131.36:0.139319,0.664031:3.11801e-38,7.10975e-05,0.999932	0/1:53:0.746418:21,22:21-21,21-22:16,17,0,18:21,12|22,4:5,1|6,2|9,1|10,1|11,1|12,2|13,3|14,1|16,2|18,2|20,2:378.127:326.675,113.385:0.0,0.538126:1.12812e-15,9.63829e-05,0.999903
-chr1	7385475	.	CAACAACAACAA	.	.	.	END=7385486;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:29,17,0,3:4,29:4,3:300.122:366.612,131.36:0.0,0.0:0.0,1.86986e-09,1.0	0/0:31:0.99995:4,4:4-5,4-5:17,8,0,5:4,17:3,3|4,2:177.236:326.675,113.385:0.412766,0.412766:0.0,6.88485e-06,0.999994
-chr1	7385514	.	AAAACAAAACAAAAC	.	.	.	END=7385528;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:27,17,0,0:3,27:NULL:267.996:366.612,131.36:0.0,0.0:0.0,6.51147e-08,1.0	0/0:28:1.00001:3,3:3-3,3-3:22,6,0,0:3,22:NULL:141.849:326.675,113.385:0.0,0.0:0.0,1.66293e-06,1.0
-chr1	7385949	.	ACAAAACAAAACAAAACAAA	.	.	.	END=7385968;RU=acaaa;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.998894:4,4:4-4,4-4:15,16,0,0:4,15:NULL:215.301:366.612,131.36:0.0,0.0:0.0,0.000847047,0.999157	0/0:29:1.0:4,4:4-4,4-4:21,8,0,0:4,21:NULL:161.162:326.675,113.385:0.0,0.0:0.0,5.3986e-06,0.999995
-chr1	7386148	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7386177;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.45196:15,27:15-15,15-27:19,14,0,10:14,3|15,16:4,2|8,2|9,1|10,2|11,1|14,1|27,1:319.729:366.612,131.36:0.0,5.81499:1.70628e-20,6.75452e-05,0.999933	0/0:31:0.990378:15,15:15-15,15-15:11,9,0,10:15,11:4,2|8,1|9,1|10,1|12,1|13,3|14,1:210.515:326.675,113.385:0.139319,0.139319:1.95257e-14,0.00320105,0.996807
-chr1	7389238	.	AAAACAAAACAAAAC	.	.	.	END=7389252;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999582:3,3:3-3,3-3:14,21,0,3:3,14:2,3:266.595:366.612,131.36:0.0,0.0:0.0,0.000228812,0.999773	0/0:20:0.996706:3,3:3-3,3-3:11,6,0,3:3,11:2,3:117.808:326.675,113.385:0.0,0.0:3.58095e-38,0.00114915,0.998854
-chr1	7389561	.	AACAACAACAAC	.	.	.	END=7389572;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.986302:4,4:4-4,4-4:10,16,0,0:4,10:NULL:184.473:366.612,131.36:0.0,0.0:3.2027e-33,0.00898798,0.991031	0/0:8:0.572521:4,4:4-4,4-4:4,4,0,0:4,4:NULL:50.0009:326.675,113.385:0.29703,0.29703:1.07314e-13,0.254933,0.745076
-chr1	7390007	.	ACACACACACAC	.	.	.	END=7390018;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:28,8,0,4:6,28:4,2|5,2:213.884:366.612,131.36:0.0,0.0:0.0,1.5855e-08,1.0	0/0:12:0.956369:6,6:6-6,6-6:8,4,0,0:6,8:NULL:64.5737:326.675,113.385:0.0,0.0:3.70441e-17,0.0228166,0.97723
-chr1	7390525	.	AAAACAAAACAAAACAAAAC	.	.	.	END=7390544;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:23,13,0,2:4,23:3,2:218.835:366.612,131.36:0.0,0.0:0.0,4.33981e-07,1.0	0/0:19:0.998138:4,4:4-4,4-4:12,5,0,2:4,12:3,2:102.812:326.675,113.385:0.0,0.0:4.38078e-36,0.000734944,0.99927
-chr1	7391902	.	AAACAAACAAAC	.	.	.	END=7391913;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.95787:3,3:3-3,3-3:8,9,0,0:3,8:NULL:117.574:366.612,131.36:0.0,0.0:1.6678e-25,0.0217778,0.978265	0/0:9:0.454772:3,3:1-3,1-3:3,6,0,0:3,3:NULL:64.9642:326.675,113.385:0.390054,0.390054:2.83571e-10,0.286577,0.713424
-chr1	7392178	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=7392205;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.989337:13,13:13-15,13-15:18,15,0,5:13,16|14,2:7,1|8,1|9,1|11,1|12,1:258.558:366.612,131.36:0.655861,0.655861:0.989359,0.0106623,1.70261e-14	0/0:32:0.745438:14,14:13-14,13-14:14,12,0,6:13,3|14,11:5,1|6,1|9,1|10,2|11,1:220.514:326.675,113.385:0.469019,0.469019:1.61047e-11,0.254054,0.745954
-chr1	7392363	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7392394;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.990618:8,8:8-8,8-8:12,12,0,2:8,12:3,1|6,1:179.708:366.612,131.36:0.0,0.0:9.96931e-33,0.00644949,0.993565	0/1:30:0.293661:8,12:8-8,8-12:18,6,0,6:8,18:4,1|7,3|8,1|11,1:185.442:326.675,113.385:0.0,1.79249:0.0,1.26003e-08,1.0
-chr1	7393303	.	TAAATAAATAAATAAA	.	.	.	END=7393318;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.945166:4,4:4-4,4-4:9,14,0,0:4,9:NULL:164.952:366.612,131.36:0.0,0.0:8.62914e-26,0.0447158,0.955357	0/0:5:0.572755:4,4:4-4,4-4:4,1,0,0:4,4:NULL:24.6243:326.675,113.385:0.0,0.0:2.61914e-12,0.227011,0.773022
-chr1	7395935	.	TATATTATATTATAT	.	.	.	END=7395949;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.987288:3,3:3-3,3-3:9,6,0,2:3,9:2,2:104.632:366.612,131.36:0.0,0.0:1.594e-26,0.00461756,0.995394	0/0:12:0.990461:3,3:3-3,3-3:10,2,0,0:3,10:NULL:56.8744:326.675,113.385:0.0,0.0:3.51705e-29,0.00420052,0.995809
-chr1	7397361	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7397400;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:38:0.731255:21,22:21-23,21-23:8,16,0,12:21,6|22,2:4,1|6,1|7,1|8,2|9,2|10,1|17,1|19,2|20,1:279.421:366.612,131.36:0.382183,0.782491:3.14671e-23,0.00209191,0.997913	0/0:29:0.904946:20,20:19-21,19-21:7,10,0,10:20,7:6,1|7,1|8,1|9,2|18,4|19,1:201.872:326.675,113.385:0.424474,0.424474:6.32146e-09,0.0305788,0.969479
-chr1	7398005	.	CCCGCCCGCCCG	.	.	.	END=7398016;RU=cccg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:23,13,0,0:3,23:NULL:211.852:366.612,131.36:0.0,0.0:0.0,8.05988e-07,1.0	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.369:326.675,113.385:0.0,0.0:0.0,3.3594e-07,1.0
-chr1	7399995	.	TATTTATTTATTTATTTATTTATTTATT	.	.	.	END=7400022;RU=tatt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.99992:7,7:7-7,7-7:17,18,0,2:7,17:4,1|6,1:252.317:366.612,131.36:0.0,0.0:8.398e-42,6.27518e-05,0.99994	0/0:29:0.999872:7,7:2-7,2-7:16,7,0,5:7,16:2,1|3,1|4,1|6,2:168.405:326.675,113.385:2.26211,2.26211:6.47696e-40,7.5926e-05,0.999926
-chr1	7400995	.	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	.	END=7401018;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999799:6,6:5-6,5-6:15,15,0,5:6,15:3,1|4,2|5,2:236.311:366.612,131.36:0.284901,0.284901:1.1652e-41,9.16741e-05,0.99991	0/0:53:1.0:6,6:6-6,6-6:26,16,0,11:6,26:2,1|3,5|4,3|5,2:331.38:326.675,113.385:0.0,0.0:0.0,5.8558e-08,1.0
-chr1	7401260	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7401291;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.999134:15,15:15-15,15-15:25,13,0,7:14,3|15,20|16,2:4,1|7,1|9,2|11,1|12,1|13,1:297.301:366.612,131.36:0.139319,0.139319:0.99925,0.000751175,7.51773e-16	0/0:55:1.0:16,16:16-16,16-16:31,17,0,6:15,3|16,28:7,1|11,2|12,1|13,1|15,1:351.031:326.675,113.385:0.0,0.0:5.42445e-32,1.93846e-06,1.0
-chr1	7403154	.	ATTTATTTATTT	.	.	.	END=7403165;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:3,3:3-3,3-3:30,18,0,0:3,30:NULL:285.884:366.612,131.36:0.0,0.0:0.0,6.03542e-09,1.0	0/0:30:1.0:3,3:3-3,3-3:26,4,0,0:3,26:NULL:138.461:326.675,113.385:0.0,0.0:0.0,7.52932e-08,1.0
-chr1	7403493	.	ACACACACACACACAC	.	.	.	END=7403508;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:8,8:8-8,8-8:23,21,0,5:8,23:4,1|5,1|6,1|7,2:333.163:366.612,131.36:0.0,0.0:1.72e-43,7.76178e-07,1.0	0/0:33:0.99689:8,8:8-9,8-9:12,16,0,4:8,12:5,2|6,2:226.827:326.675,113.385:0.334882,0.334882:4.59965e-23,0.0016035,0.998404
-chr1	7403509	.	CCACCACCACCACCACCACCA	.	.	.	END=7403529;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:7,7:7-7,7-7:21,19,0,0:7,21:NULL:268.328:366.612,131.36:0.0,0.0:0.0,1.092e-05,0.999993	0/0:31:0.99736:7,7:7-7,7-7:12,15,0,4:7,12:4,2|5,2:216.079:326.675,113.385:0.0,0.0:2.04253e-36,0.00152758,0.998475
-chr1	7403538	.	AAATAAATAAAT	.	.	.	END=7403549;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:279.211:366.612,131.36:0.0,0.0:0.0,1.52631e-06,1.0	0/0:26:0.999353:3,3:3-3,3-3:14,12,0,0:3,14:NULL:167.036:326.675,113.385:0.0,0.0:1.7057e-41,0.000411744,0.999591
-chr1	7407348	.	TAATAATAATAATAATAA	.	.	.	END=7407365;RU=taa;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:6,6:6-6,6-6:27,20,0,0:6,27:NULL:286.472:366.612,131.36:0.0,0.0:0.0,8.2752e-08,1.0	0/0:36:0.999988:6,6:5-6,5-6:18,12,0,5:6,18:4,2|5,3:225.568:326.675,113.385:0.195027,0.195027:1.25e-43,9.64497e-06,0.999993
-chr1	7407486	.	TATATATATATA	.	.	.	END=7407497;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999744:6,6:6-6,6-6:16,11,0,0:6,16:NULL:166.769:366.612,131.36:0.0,0.0:4.11278e-28,0.000193897,0.99981	0/0:23:0.987407:6,6:6-6,6-6:10,13,0,0:6,10:NULL:161.381:326.675,113.385:0.0,0.0:6.72984e-18,0.00804479,0.991974
-chr1	7407553	.	ACACACACACAC	.	.	.	END=7407564;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:6,6:6-6,6-6:23,9,0,2:6,23:5,2:189.028:366.612,131.36:0.0,0.0:0.0,4.76762e-07,1.0	0/0:33:1.0:6,6:6-6,6-6:25,7,0,0:6,25:NULL:165.558:326.675,113.385:0.0,0.0:0.0,1.80849e-07,1.0
-chr1	7409238	.	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	.	END=7409277;RU=aaaac;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999948:8,8:8-8,8-8:17,13,0,13:8,17:3,1|4,4|5,1|6,2|7,5:276.522:366.612,131.36:0.0,0.0:1.2e-43,2.10434e-05,0.999979	0/0:21:0.982309:8,8:7-8,7-8:9,3,0,8:8,9:3,1|4,3|6,1|7,3:120.301:326.675,113.385:0.45695,0.45695:1.97341e-23,0.00575558,0.994257
-chr1	7410953	.	AGAAGAAGAAGA	.	.	.	END=7410964;RU=aga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997912:4,4:4-4,4-4:13,15,0,0:4,13:NULL:186.244:366.612,131.36:0.0,0.0:5.88746e-31,0.00152302,0.998481	0/0:29:0.998108:4,4:4-4,4-4:13,16,0,0:4,13:NULL:196.156:326.675,113.385:0.0,0.0:4.49557e-31,0.00144172,0.998564
-chr1	7416243	.	ATTTATTTATTT	.	.	.	END=7416254;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,12,0,2:3,22:2,2:216.436:366.612,131.36:0.0,0.0:0.0,1.14461e-06,1.0	0/0:29:1.0:3,3:3-3,3-3:23,6,0,0:3,23:NULL:143.715:326.675,113.385:0.0,0.0:0.0,4.6248e-07,1.0
-chr1	7421873	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=7421914;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.998197:21,21:21-23,21-23:14,18,0,11:21,14:6,1|7,3|12,2|15,1|19,2|20,2:324.695:366.612,131.36:0.670934,0.670934:5.09017e-16,0.000522917,0.999478	0/0:38:0.686723:21,21:20-22,20-22:5,16,0,15:21,5:4,1|8,1|9,1|10,2|11,1|14,2|15,1|16,1|17,1|18,1|19,1|20,2:290.947:326.675,113.385:0.626507,0.626507:4.14178e-06,0.120716,0.879379
-chr1	7423553	.	TGGGTTGGGTTGGGT	.	.	.	END=7423567;RU=tgggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:28,13,0,2:3,28:2,1|3,1:245.609:366.612,131.36:0.0,0.0:0.0,6.4823e-09,1.0	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.697:326.675,113.385:0.0,0.0:0.0,2.56633e-06,1.0
-chr1	7423835	.	CCAGCCAGCCAG	.	.	.	END=7423846;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.998069:3,3:3-3,3-3:12,18,0,0:3,12:NULL:213.338:366.612,131.36:0.0,0.0:2.9623e-41,0.00101561,0.99899	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.014:326.675,113.385:0.0,0.0:0.0,8.03606e-06,0.999994
-chr1	7424052	.	ATATATATATATAT	.	.	.	END=7424065;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.982641:7,7:6-8,6-8:10,7,0,0:7,10:NULL:108.711:366.612,131.36:0.466294,0.466294:2.7639e-16,0.0114908,0.988532	0/0:25:0.998037:7,7:6-8,6-8:13,10,0,0:7,13:NULL:137.626:326.675,113.385:0.344122,0.344122:1.78319e-21,0.00109507,0.998907
-chr1	7425278	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=7425323;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.94803:23,23:21-24,21-24:9,16,0,16:23,9:8,1|9,2|10,2|11,1|12,1|13,1|15,1|17,2|20,1|21,1|22,3:322.991:366.612,131.36:0.570833,0.570833:8.83532e-11,0.0119463,0.988078	0/0:63:0.513251:23,23:21-27,21-27:20,24,0,18:21,3|22,4|23,11|24,2:5,4|9,1|10,1|11,3|14,2|15,4|19,1|20,2:473.466:326.675,113.385:1.61365,1.61365:3.31356e-10,0.476846,0.523247
-chr1	7426578	.	TCTTTCTTTCTT	.	.	.	END=7426589;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999873:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.935:366.612,131.36:0.0,0.0:0.0,7.34154e-05,0.999926	0/0:12:0.924749:3,3:3-3,3-3:7,5,0,0:3,7:NULL:72.4247:326.675,113.385:0.0,0.0:1.24085e-20,0.0349296,0.965131
-chr1	7426730	.	TATATATATATATATATATATATATATATATATATATATATATATATA	TA	.	.	END=7426777;RU=ta;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0256329:1,1:1-1,1-1:0,14,0,0:NULL:NULL:123.961:366.612,131.36:0.0,0.0:0.866772,0.131153,0.00217551	1/1:4:0.00195412:1,1:1-1,1-1:0,4,0,0:NULL:NULL:34.6221:326.675,113.385:0.0,0.0:0.371713,0.539518,0.0888731
-chr1	7431725	.	ATTATTATTATT	.	.	.	END=7431736;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999499:4,4:4-4,4-4:14,11,0,4:4,14:3,4:187.286:366.612,131.36:0.0,0.0:7.8315e-37,0.000191455,0.999811	0/0:35:1.0:4,4:4-4,4-4:26,9,0,0:4,26:NULL:183.414:326.675,113.385:0.0,0.0:0.0,1.08437e-07,1.0
-chr1	7440876	.	TTCCTTCCTTCC	.	.	.	END=7440887;RU=ttcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:29,10,0,2:3,29:2,2:213.709:366.612,131.36:0.0,0.0:0.0,4.1056e-09,1.0	0/0:40:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:249.022:326.675,113.385:0.0,0.0:0.0,1.88782e-06,1.0
-chr1	7440950	.	AAACAAACAAAC	.	.	.	END=7440961;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:155.473:366.612,131.36:0.0,0.0:0.0,7.67418e-08,1.0	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:221.718:326.675,113.385:0.0,0.0:0.0,7.89085e-06,0.999994
-chr1	7444083	.	ATATATATATATAT	.	.	.	END=7444096;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.515785:7,7:6-8,6-8:4,9,0,0:7,4:NULL:101.366:366.612,131.36:0.820887,0.820887:1.31889e-07,0.297634,0.702376	0/0:10:0.952448:7,7:7-7,7-7:8,2,0,0:7,8:NULL:49.8835:326.675,113.385:0.0,0.0:2.21982e-14,0.0249351,0.975111
-chr1	7447332	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=7447355;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:6,6:6-6,6-6:29,25,0,5:6,29:3,4|4,1:381.561:366.612,131.36:0.0,0.0:0.0,1.29042e-08,1.0	0/0:39:1.0:6,6:6-6,6-6:27,7,0,5:6,27:2,2|3,1|4,1|5,1:210.645:326.675,113.385:0.0,0.0:0.0,4.00341e-08,1.0
-chr1	7449579	.	TCTGTCTCTGTCTCTGTCTCTGTC	.	.	.	END=7449602;RU=tctgtc;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:25,24,0,0:4,25:NULL:323.571:366.612,131.36:0.0,0.0:0.0,7.14102e-07,1.0	0/0:29:0.999342:4,4:3-4,3-4:15,13,0,0:4,15:NULL:180.716:326.675,113.385:0.311527,0.311527:6e-45,0.000577142,0.999424
-chr1	7450712	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7450769;RU=tc;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.325423:26,26:10-26,10-26:6,14,0,10:25,2|26,4:6,1|8,2|9,1|12,1|15,2|17,2|18,1:238.154:366.612,131.36:6.80582,6.80582:0.989552,0.0104685,2.18193e-10	2/2:20:0.0285637:32,32:25-32,25-32:0,7,0,9:NULL:4,2|5,1|8,1|13,1|27,2|28,1|32,1:141.607:326.675,113.385:1.50058,1.50058:9.70053e-09,0.34967,0.650364
-chr1	7453756	.	AGCAGCAGCAGC	.	.	.	END=7453767;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:286.722:366.612,131.36:0.0,0.0:0.0,3.87272e-09,1.0	0/0:44:1.0:4,4:4-4,4-4:27,17,0,0:4,27:NULL:265.752:326.675,113.385:0.0,0.0:0.0,1.23179e-07,1.0
-chr1	7456598	.	TTTATTTATTTA	.	.	.	END=7456609;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:269.69:366.612,131.36:0.0,0.0:0.0,2.51275e-07,1.0	0/0:34:0.999931:3,3:3-3,3-3:17,17,0,0:3,17:NULL:221.423:326.675,113.385:0.0,0.0:0.0,6.4736e-05,0.999939
-chr1	7460799	.	ATTTATTTATTT	.	.	.	END=7460810;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:37,23,0,0:3,37:NULL:352.908:366.612,131.36:0.0,0.0:0.0,7.23043e-11,1.0	0/0:33:1.0:3,3:3-3,3-3:23,10,0,0:3,23:NULL:181.937:326.675,113.385:0.0,0.0:0.0,6.82864e-07,1.0
-chr1	7461208	.	CACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACA	.	.	END=7461233;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:69:0.902457:19,19:6-20,6-20:21,29,0,18:16,2|18,3|19,14|20,2:5,1|7,1|8,2|11,3|14,2|16,4|17,4|18,1:531.308:366.612,131.36:4.86734,4.86734:0.0,2.49675e-08,1.0	0/0:62:0.99988:13,13:4-13,4-13:29,18,0,13:12,4|13,25:5,1|6,2|7,1|8,1|9,2|10,3|11,1|12,1|13,1:406.177:326.675,113.385:2.43794,2.43794:8.67065e-38,0.000120026,0.99988
-chr1	7466892	.	TAAATAAATAAA	.	.	.	END=7466903;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:20,10,0,3:3,20:2,2|3,1:193.314:366.612,131.36:0.0,0.0:0.0,2.12392e-06,1.0	0/0:24:0.999881:3,3:3-3,3-3:16,8,0,0:3,16:NULL:134.134:326.675,113.385:0.0,0.0:0.0,7.06065e-05,0.999933
-chr1	7466980	.	AAAGTTTAAAGTTTAAAGTTT	.	.	.	END=7467000;RU=aaagttt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:230.609:366.612,131.36:0.0,0.0:0.0,5.97646e-06,0.999995	0/0:19:0.999723:3,3:3-3,3-3:15,4,0,0:3,15:NULL:96.7021:326.675,113.385:0.0,0.0:0.0,0.000150997,0.99985
-chr1	7468038	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC,TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=7468113;RU=tttc;PERIOD=4;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.0273217:21,21:17-23,17-23:0,12,0,15:NULL:3,2|4,1|5,1|8,1|9,2|10,3|13,1|15,2|19,1|21,1:217.9:366.612,131.36:2.02262,2.02262:5.75985e-16,0.383764,0.616294	1/1:25:0.020238:16,16:7-19,7-19:0,7,0,13:NULL:7,2|10,1|11,2|12,5|13,1|14,1|16,1:158.469:326.675,113.385:3.56232,3.56232:0.312801,0.5122,0.175013
-chr1	7468830	.	AAAACAAAACAAAAC	.	.	.	END=7468844;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999744:3,3:3-3,3-3:15,16,0,2:3,15:2,2:222.579:366.612,131.36:0.0,0.0:0.0,0.00017591,0.999826	0/0:24:0.999755:3,3:3-3,3-3:15,9,0,0:3,15:NULL:142.313:326.675,113.385:0.0,0.0:0.0,0.00016387,0.999841
-chr1	7469326	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7469375;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:53:0.532474:25,30:19-27,19-31:10,24,0,17:19,2|25,6|27,2:4,1|7,2|8,2|9,3|12,1|13,1|16,1|18,1|19,1|22,1|26,2|30,1:423.149:366.612,131.36:1.50195,2.63117:3.63299e-29,2.26825e-07,1.0	0/0:50:0.984792:25,25:20-27,20-27:11,23,0,12:25,11:6,2|7,2|9,1|13,1|14,2|18,1|19,2|25,1:366.528:326.675,113.385:1.77125,1.77125:1.29155e-26,0.00944488,0.990575
-chr1	7469376	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7469415;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.287036:16,19:16-16,16-19:7,20,0,17:16,7:4,1|6,2|8,2|9,1|10,4|11,1|15,5|18,1:349.347:366.612,131.36:0.19802,1.12645:0.566,0.434096,8.58628e-15	0/0:52:0.920153:20,20:20-20,20-20:7,24,0,21:20,7:5,2|6,1|7,4|8,1|9,1|10,1|11,2|12,2|14,2|15,2|16,1|18,1|19,1:420.393:326.675,113.385:0.0,0.0:4.29867e-09,0.0449381,0.955134
-chr1	7473898	.	AAACAAACAAAC	.	.	.	END=7473909;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.259:366.612,131.36:0.0,0.0:0.0,7.52061e-07,1.0	0/0:25:0.999257:3,3:3-3,3-3:14,11,0,0:3,14:NULL:154.952:326.675,113.385:0.0,0.0:9.73e-43,0.000477853,0.999523
-chr1	7475210	.	CTGCCTCTGCCTCTGCCT	.	.	.	END=7475227;RU=ctgcct;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.878:366.612,131.36:0.0,0.0:0.0,1.86616e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:177.338:326.675,113.385:0.0,0.0:0.0,3.60068e-07,1.0
-chr1	7475765	.	TATTATTATTAT	.	.	.	END=7475776;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.997794:4,4:4-4,4-4:12,15,0,0:4,12:NULL:188.056:366.612,131.36:0.0,0.0:1.78865e-40,0.00138378,0.998619	0/0:17:0.993907:4,4:4-4,4-4:11,6,0,0:4,11:NULL:98.0058:326.675,113.385:0.0,0.0:7.5814e-37,0.00390186,0.99611
-chr1	7482108	.	TTTTTTGTTTTTTGTTTTTTGTTTTTTG	TTTTTTGTTTTTTGTTTTTTG	.	.	END=7482135;RU=ttttttg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.0593018:3,3:3-3,3-3:0,0,0,4:NULL:3,4:26.8546:366.612,131.36:0.0,0.0:0.0740912,0.397935,0.528156	0/0:25:0.999114:4,4:4-4,4-4:13,7,0,5:4,13:2,1|3,4:149.54:326.675,113.385:0.0,0.0:3.87466e-38,0.000414173,0.99959
-chr1	7482227	.	ACCCACCCACCC	.	.	.	END=7482238;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.783895:3,3:3-3,3-3:5,14,0,0:3,5:NULL:136.395:366.612,131.36:0.0,0.0:3.03597e-14,0.117362,0.882742	0/0:26:0.951091:3,3:3-3,3-3:8,18,0,0:3,8:NULL:189.78:326.675,113.385:0.19802,0.19802:4.98595e-22,0.0337134,0.966351
-chr1	7492065	.	GGAGGGAGGGAG	.	.	.	END=7492076;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,12,0,2:3,23:2,2:214.218:366.612,131.36:0.0,0.0:0.0,4.3342e-07,1.0	0/0:30:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:154.508:326.675,113.385:0.0,0.0:0.0,5.77157e-07,1.0
-chr1	7493936	.	TAAATAAATAAATAAA	.	.	.	END=7493951;RU=taaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:189.401:366.612,131.36:0.0,0.0:0.0,4.13945e-07,1.0	0/0:23:0.999022:4,4:4-4,4-4:13,6,0,4:4,13:3,4:131.793:326.675,113.385:0.0,0.0:1.34938e-38,0.000363209,0.999637
-chr1	7495072	.	AAAATAAAATAAAAT	.	.	.	END=7495086;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999951:3,3:3-3,3-3:18,22,0,0:3,18:NULL:271.354:366.612,131.36:0.0,0.0:0.0,4.36311e-05,0.999957	0/0:35:0.999969:3,3:3-3,3-3:18,17,0,0:3,18:NULL:232.209:326.675,113.385:0.0,0.0:0.0,3.56805e-05,0.999964
-chr1	7497345	.	CAAACAAACAAA	.	.	.	END=7497356;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,22,0,0:3,24:NULL:292.966:366.612,131.36:0.0,0.0:0.0,5.38177e-07,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:158.094:326.675,113.385:0.0,0.0:0.0,2.8124e-06,1.0
-chr1	7500168	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT	.	.	END=7500193;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:17:0.59259:13,14:12-14,12-14:5,11,0,0:13,2|14,3:NULL:130.067:366.612,131.36:0.742244,0.868696:1.86284e-05,0.116728,0.88336	1/2:16:0.419391:12,14:12-13,12-14:9,7,0,0:12,3|13,3|14,3:NULL:116.493:326.675,113.385:0.538126,0.588255:0.000815859,0.579807,0.419465
-chr1	7502120	.	ACACACACACACAC	.	.	.	END=7502133;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:75:1.0:7,7:7-7,7-7:41,30,0,3:7,39|8,2:4,1|5,1|6,1:478.922:366.612,131.36:0.0,0.0:0.0,6.18289e-12,1.0	0/0:50:0.999841:7,7:6-7,6-7:28,19,0,3:6,3|7,25:4,1|5,2:329.444:326.675,113.385:0.253975,0.253975:0.0,0.000161628,0.999841
-chr1	7507479	.	TTTTAAATTTTAAATTTTAAA	.	.	.	END=7507499;RU=ttttaaa;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999978:3,3:3-3,3-3:18,10,0,0:3,18:NULL:168.716:366.612,131.36:0.0,0.0:0.0,2.90937e-05,0.999972	0/0:22:0.997651:3,3:3-3,3-3:12,10,0,0:3,12:NULL:137.947:326.675,113.385:0.0,0.0:1.18906e-35,0.00174143,0.998262
-chr1	7512509	.	TAAATAAATAAA	.	.	.	END=7512520;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998885:3,3:3-3,3-3:13,13,0,0:3,13:NULL:173.123:366.612,131.36:0.0,0.0:3.62e-43,0.00064395,0.999361	0/0:18:0.995942:3,3:3-3,3-3:11,7,0,0:3,11:NULL:105.003:326.675,113.385:0.0,0.0:1.63034e-36,0.00216985,0.997837
-chr1	7518438	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7518481;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.889935:19,19:19-19,19-19:7,6,0,11:19,7:7,2|8,3|12,1|13,1|18,4:174.41:366.612,131.36:0.0,0.0:0.985099,0.0149306,8.37e-15	0/0:34:0.769607:22,22:21-22,21-22:9,11,0,14:21,2|22,7:5,2|6,1|7,1|11,2|12,1|13,2|14,1|15,2|16,2:254.253:326.675,113.385:0.398507,0.398507:6.15149e-07,0.210266,0.789782
-chr1	7520010	.	TGTGTGTGTGTGTG	TGTGTGTGTGTG	.	.	END=7520023;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:38:1.0:6,7:6-6,7-7:19,18,0,0:6,8|7,11:NULL:255.836:366.612,131.36:0.0,0.0:3.15511e-09,1.0,1.36487e-11	0/0:36:1.0:7,7:7-7,7-7:28,8,0,0:7,28:NULL:187.502:326.675,113.385:0.0,0.0:4.34125e-35,6.38469e-08,1.0
-chr1	7520572	.	AAACAAAACAAAACA	.	.	.	END=7520586;RU=aaaca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999963:3,3:3-3,3-3:18,10,0,0:3,18:NULL:166.883:366.612,131.36:0.0,0.0:0.0,3.36053e-05,0.99997	0/0:31:1.0:3,3:3-3,3-3:25,6,0,0:3,25:NULL:150.359:326.675,113.385:0.0,0.0:0.0,1.45848e-07,1.0
-chr1	7522440	.	ATACATACATAC	.	.	.	END=7522451;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.980761:3,3:3-3,3-3:9,10,0,0:3,9:NULL:122.028:366.612,131.36:0.0,0.0:1.1521e-29,0.0106761,0.989349	0/0:20:0.999312:3,3:3-3,3-3:14,6,0,0:3,14:NULL:110.981:326.675,113.385:0.0,0.0:0.0,0.000350902,0.999651
-chr1	7522568	.	TATATATATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATA	.	.	END=7522619;RU=ta;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:5:0.0384164:25,25:23-26,23-26:0,4,0,0:NULL:NULL:41.887:366.612,131.36:1.03142,1.03142:0.310425,0.502293,0.187294	1/1:1:0.020438:23,23:26-26,26-26:0,0,0,0:NULL:NULL:-25.0:326.675,113.385:0.0,0.0:0.183736,0.489868,0.326511
-chr1	7522982	.	TTCTTTCTTTCTTTCT	.	.	.	END=7522997;RU=ttct;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997267:4,4:4-4,4-4:11,10,0,3:4,11:3,3:159.691:366.612,131.36:0.0,0.0:2.07316e-37,0.00102804,0.998975	0/0:29:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:147.627:326.675,113.385:0.0,0.0:0.0,1.34801e-06,1.0
-chr1	7524309	.	TAAAATAAAATAAAATAAAATAAAA	.	.	.	END=7524333;RU=taaaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999598:5,5:5-5,5-5:16,20,0,0:5,16:NULL:250.858:366.612,131.36:0.0,0.0:1e-45,0.000380237,0.999621	0/0:23:0.959119:5,5:5-5,5-5:7,11,0,5:5,7:4,5:166.74:326.675,113.385:0.0,0.0:2.65051e-20,0.0202231,0.979819
-chr1	7524638	.	AACAAACAAACAAACAAACA	.	.	.	END=7524657;RU=aaca;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.99787:5,5:5-5,5-5:12,5,0,3:5,12:4,3:119.09:366.612,131.36:0.0,0.0:6.85631e-34,0.000774939,0.999227	0/0:40:1.0:5,5:3-5,3-5:24,9,0,6:5,24:3,2|4,4:220.454:326.675,113.385:0.43384,0.43384:0.0,1.91326e-07,1.0
-chr1	7527088	.	TTTTATTTTATTTTA	.	.	.	END=7527102;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999917:3,3:3-3,3-3:17,8,0,0:3,17:NULL:140.538:366.612,131.36:0.0,0.0:0.0,5.55056e-05,0.999948	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:198.701:326.675,113.385:0.0,0.0:0.0,6.87673e-06,0.999994
-chr1	7527397	.	AATAAATAAATA	.	.	.	END=7527408;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999312:3,3:3-3,3-3:14,10,0,0:3,14:NULL:146.911:366.612,131.36:0.0,0.0:0.0,0.000414194,0.99959	0/0:24:1.0:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.585:326.675,113.385:0.0,0.0:0.0,5.10849e-06,0.999995
-chr1	7532994	.	TCTCTCTCTCTCTCTC	.	.	.	END=7533009;RU=tc;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.998564:8,8:6-8,6-8:25,14,0,4:7,3|8,22:4,2|6,1|7,1:268.724:366.612,131.36:0.479355,0.479355:7.15827e-37,0.00144231,0.998564	0/0:65:1.0:8,8:8-8,8-8:32,24,0,8:8,32:5,3|6,2|7,3:406.392:326.675,113.385:0.0,0.0:0.0,1.17275e-09,1.0
-chr1	7538575	.	TTAATTAATTAATTAA	.	.	.	END=7538590;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999827:4,4:4-4,4-4:17,16,0,0:4,17:NULL:213.35:366.612,131.36:0.0,0.0:0.0,0.000140341,0.999864	0/0:25:0.999905:4,4:4-4,4-4:17,8,0,0:4,17:NULL:137.243:326.675,113.385:0.0,0.0:0.0,6.42069e-05,0.99994
-chr1	7542839	.	TCTCCTCTCCTCTCC	.	.	.	END=7542853;RU=tctcc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:225.92:366.612,131.36:0.0,0.0:0.0,2.00965e-06,1.0	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:172.591:326.675,113.385:0.0,0.0:0.0,8.90944e-08,1.0
-chr1	7544211	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=7544230;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.998288:4,4:4-4,4-4:12,10,0,4:4,12:3,4:168.562:366.612,131.36:0.0,0.0:3.492e-37,0.000736078,0.999265	0/0:32:1.0:4,4:4-4,4-4:19,11,0,2:4,19:3,2:191.689:326.675,113.385:0.0,0.0:0.0,7.93364e-06,0.999994
-chr1	7544358	.	ATATATATATATATAT	.	.	.	END=7544373;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.778181:8,8:8-10,8-10:16,3,0,0:8,14|10,2:NULL:101.556:366.612,131.36:0.932167,0.932167:2.9458e-20,0.000123362,0.999879	0/0:23:0.997822:8,8:8-8,8-8:13,10,0,0:8,13:NULL:149.317:326.675,113.385:0.0,0.0:2.6257e-17,0.00140249,0.998603
-chr1	7546856	.	TTTGTTTGTTTG	.	.	.	END=7546867;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:29,18,0,2:3,29:2,2:296.504:366.612,131.36:0.0,0.0:0.0,6.73998e-09,1.0	0/0:45:1.0:3,3:3-3,3-3:32,13,0,0:3,32:NULL:240.066:326.675,113.385:0.0,0.0:0.0,1.40992e-09,1.0
-chr1	7549821	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=7549896;RU=ag;PERIOD=2;REF=38.0;EXPTHRESH=38	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:25:0.0346401:43,43:32-43,32-43:0,10,0,15:NULL:5,2|6,1|8,1|9,1|13,1|18,1|25,1|26,1|27,1|29,1|30,1|32,1|39,1|40,1:210.818:366.612,131.36:3.20615,3.20615:2.41683e-15,0.418057,0.582021	1/1:29:0.240765:37,37:35-37,35-37:2,14,0,13:37,2:5,1|8,1|9,1|14,2|15,2|16,1|19,1|24,1|27,1|30,1|34,1:243.499:326.675,113.385:0.43384,0.43384:0.619148,0.35909,0.0218496
-chr1	7550748	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=7550765;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:23,14,0,2:3,23:2,2:239.754:366.612,131.36:0.0,0.0:0.0,6.73102e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.669:326.675,113.385:0.0,0.0:0.0,2.4095e-07,1.0
-chr1	7554806	.	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=7554849;RU=tatt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999608:9,9:9-9,9-9:15,12,0,5:9,15:3,1|5,2|7,2:210.091:366.612,131.36:0.0,0.0:0.999896,0.000104551,7.20019e-34	0/0:31:0.995921:11,11:11-11,11-11:11,10,0,10:11,11:5,1|6,2|7,2|9,1|10,4:208.914:326.675,113.385:0.0,0.0:1.39714e-23,0.00136196,0.998641
-chr1	7559127	.	GTTAATGGTTAATGGTTAATGGTTAATG	.	.	.	END=7559154;RU=gttaatg;PERIOD=7;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:4,4:4-4,4-4:20,11,0,5:4,20:3,5:213.852:366.612,131.36:0.0,0.0:0.0,3.7562e-06,1.0	0/0:38:0.999927:4,4:4-4,4-4:16,14,0,8:4,16:3,8:247.545:326.675,113.385:0.0,0.0:0.0,5.09107e-05,0.999949
-chr1	7560900	.	TTTATTTATTTATTTATTTA	.	.	.	END=7560919;RU=ttta;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:5,5:5-5,5-5:26,9,0,3:5,26:4,3:204.862:366.612,131.36:0.0,0.0:0.0,4.48993e-08,1.0	0/0:41:1.0:5,5:5-5,5-5:30,8,0,2:5,30:3,1|4,1:207.471:326.675,113.385:0.0,0.0:0.0,5.3766e-09,1.0
-chr1	7570199	.	TTGTTGTTGTTG	.	.	.	END=7570210;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999875:4,4:4-4,4-4:16,11,0,3:4,16:3,3:187.712:366.612,131.36:0.0,0.0:0.0,5.7529e-05,0.999942	0/0:33:1.00001:4,4:4-4,4-4:21,12,0,0:4,21:NULL:193.419:326.675,113.385:0.0,0.0:0.0,3.83183e-06,1.0
-chr1	7579482	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7579505;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.99029:8,8:2-8,2-8:10,21,0,10:8,10:2,3|3,1|5,1|7,5:307.104:366.612,131.36:2.89082,2.89082:0.0,0.000535287,0.999469	0/0:40:0.995425:6,6:5-6,5-6:22,11,0,7:5,2|6,20:2,1|3,1|4,1|5,4:251.596:326.675,113.385:0.398507,0.398507:0.0,0.00459544,0.995416
-chr1	7584141	.	AACAACAACAAC	.	.	.	END=7584152;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:24,12,0,0:4,24:NULL:208.236:366.612,131.36:0.0,0.0:0.0,8.88332e-07,1.0	0/0:29:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:152.193:326.675,113.385:0.0,0.0:0.0,3.31203e-06,1.0
-chr1	7586036	.	TGGGTGGGTGGG	.	.	.	END=7586047;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:25,21,0,0:3,25:NULL:286.938:366.612,131.36:0.0,0.0:0.0,2.03703e-07,1.0	0/0:31:0.999937:3,3:3-3,3-3:17,14,0,0:3,17:NULL:197.905:326.675,113.385:0.0,0.0:0.0,4.50361e-05,0.999956
-chr1	7590013	.	ATGTATGTATGTATGTATGTATGTATGT	ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	END=7590040;RU=atgt;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:62:1.0:11,11:11-11,11-11:20,20,0,22:11,20:4,1|5,2|6,2|7,4|8,5|9,1|10,7:432.91:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:53:1.0:7,7:7-7,7-7:27,15,0,11:7,27:2,1|3,2|4,2|5,3|6,3:334.025:326.675,113.385:0.0,0.0:6.34877e-36,7.12813e-08,1.0
-chr1	7591071	.	GAGGAGGAGGAGGAGGAG	.	.	.	END=7591088;RU=gag;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999987:6,6:6-6,6-6:20,28,0,0:6,20:NULL:346.721:366.612,131.36:0.0,0.0:0.0,2.01279e-05,0.99998	0/0:48:1.00001:6,6:6-6,6-6:22,24,0,2:6,22:4,1|5,1:315.295:326.675,113.385:0.0,0.0:0.0,1.8212e-06,1.0
-chr1	7592319	.	CAAACAAACAAA	.	.	.	END=7592330;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.998935:3,3:3-3,3-3:13,13,0,3:3,13:2,3:195.04:366.612,131.36:0.0,0.0:8.418e-42,0.000410217,0.999591	0/0:14:0.997808:3,3:3-3,3-3:12,2,0,0:3,12:NULL:65.2842:326.675,113.385:0.0,0.0:6.32806e-39,0.000946074,0.999058
-chr1	7593902	.	AAACAAACAAACAAAC	.	.	.	END=7593917;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:4,4:4-4,4-4:31,28,0,3:4,31:3,3:401.189:366.612,131.36:0.0,0.0:0.0,1.30138e-09,1.0	0/0:44:1.00001:4,4:4-4,4-4:22,18,0,4:4,22:2,1|3,3:291.754:326.675,113.385:0.0,0.0:0.0,2.25469e-06,1.0
-chr1	7604547	.	TTAATTAATTAA	.	.	.	END=7604558;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.99893:3,3:3-3,3-3:13,27,0,0:3,13:NULL:298.801:366.612,131.36:0.0,0.0:2.38039e-40,0.000887786,0.999118	0/0:33:0.999946:3,3:3-3,3-3:17,16,0,0:3,17:NULL:206.927:326.675,113.385:0.0,0.0:0.0,4.86683e-05,0.999955
-chr1	7606004	.	CTGCTGCTGCTG	CTG	.	.	END=7606015;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.000327754:1,1:1-1,1-1:0,1,0,0:NULL:NULL:8.70265:366.612,131.36:0.0,0.0:0.0027931,0.119525,0.877789	0/0:50:1.0:4,4:4-4,4-4:33,17,0,0:4,33:NULL:284.495:326.675,113.385:0.0,0.0:0.0,1.60651e-09,1.0
-chr1	7614755	.	TCCTCCTCCTCC	.	.	.	END=7614766;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:4,4:4-4,4-4:32,19,0,2:4,32:3,2:316.87:366.612,131.36:0.0,0.0:0.0,9.31883e-10,1.0	0/0:55:1.0:4,4:4-4,4-4:39,13,0,3:4,39:3,3:289.997:326.675,113.385:0.0,0.0:0.0,7.01508e-12,1.0
-chr1	7618269	.	AATAAATAAATA	.	.	.	END=7618280;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:244.391:366.612,131.36:0.0,0.0:0.0,9.92004e-08,1.0	0/0:27:1.0:3,3:3-3,3-3:25,2,0,0:3,25:NULL:115.743:326.675,113.385:0.0,0.0:0.0,1.26847e-07,1.0
-chr1	7621644	.	CTTTCTTTCTTT	.	.	.	END=7621655;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995956:3,3:3-3,3-3:11,19,0,0:3,11:NULL:225.21:366.612,131.36:0.0,0.0:8.52516e-38,0.00211426,0.99789	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:210.959:326.675,113.385:0.0,0.0:0.0,1.43963e-07,1.0
-chr1	7624737	.	CAACAACAACAACAACAACAACAACAACAA	CAACAACAACAACAACAACAACAACAACAACAACAA	.	.	END=7624766;RU=caa;PERIOD=3;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.998272:12,12:9-12,9-12:14,18,0,7:12,14:4,1|5,1|6,1|7,1|10,3:281.034:366.612,131.36:1.03993,1.03993:0.0,0.000371058,0.99963	0/0:40:1.0:10,10:10-10,10-10:24,9,0,6:10,24:6,2|7,2|9,2:226.838:326.675,113.385:0.0,0.0:0.0,2.91704e-07,1.0
-chr1	7626618	.	TTATTTATTTATTTAT	.	.	.	END=7626633;RU=ttat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:4,4:4-4,4-4:32,25,0,4:4,32:2,1|3,3:372.388:366.612,131.36:0.0,0.0:0.0,1.15553e-09,1.0	0/0:24:1.0:4,4:4-4,4-4:19,3,0,2:4,19:2,1|3,1:115.882:326.675,113.385:0.0,0.0:0.0,6.68964e-06,0.999994
-chr1	7630404	.	ACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7630451;RU=ac;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.380134:23,23:21-24,21-24:6,9,0,11:22,2|23,4:6,2|7,1|8,1|11,2|14,1|16,1|17,1|22,2:205.339:366.612,131.36:0.851485,0.851485:0.92278,0.0772677,4.64652e-05	0/2:58:0.983016:24,25:23-24,23-25:21,13,0,23:23,8|24,11|25,2:4,1|6,1|8,1|10,2|11,1|12,1|14,1|15,1|16,1|17,3|18,2|20,1|21,2|22,2|23,1|24,1|25,1:429.446:326.675,113.385:0.475866,0.848371:1.52509e-19,0.0136464,0.986385
-chr1	7632861	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7632920;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:35:0.999725:14,15:14-14,14-15:6,17,0,12:14,4|15,2:3,1|4,1|5,2|6,1|8,1|9,3|11,1|12,1|13,1:269.527:366.612,131.36:0.14072,0.311527:0.000176912,0.999826,7.76206e-08	0/0:62:0.930921:15,15:14-15,14-15:8,31,0,22:15,8:3,1|4,4|5,2|6,1|7,1|8,1|9,4|10,3|11,4|13,1:479.498:326.675,113.385:0.499387,0.499387:6.14073e-22,0.0616203,0.938469
-chr1	7633359	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7633396;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.420345:22,27:20-22,20-27:7,15,0,13:20,3|22,4:7,1|8,1|9,1|11,2|13,1|16,1|17,2|18,2|20,1|27,1:289.539:366.612,131.36:0.651061,3.31844:1.51187e-26,4.74397e-08,1.0	0/0:21:0.79191:19,19:19-19,19-19:6,7,0,8:19,6:8,1|10,1|12,2|13,1|15,1|17,1|18,1:157.17:326.675,113.385:0.0,0.0:1.67294e-08,0.0692101,0.930883
-chr1	7633397	.	ATTAATTAATTA	ATTAATTAATTAATTA	.	.	END=7633408;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.605946:4,4:1-4,1-4:5,12,0,0:4,5:NULL:133.234:366.612,131.36:0.585081,0.585081:1.87865e-14,0.192351,0.807701	0/0:17:0.99704:3,3:3-3,3-3:12,5,0,0:3,12:NULL:96.7465:326.675,113.385:0.0,0.0:1.72428e-21,0.00151512,0.998489
-chr1	7637624	.	CACACACACACACA	CACACACACACACACA,CACACACACACACACACA	.	.	END=7637637;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.999391:8,9:8-10,9-10:12,25,0,0:8,3|9,7|10,2:NULL:285.742:366.612,131.36:0.683384,0.21692:3.87704e-34,1.49308e-06,1.0	0/0:38:0.999836:7,7:7-9,7-9:27,10,0,0:7,24|8,3:NULL:204.461:326.675,113.385:0.405095,0.405095:1.08056e-35,1.06684e-07,1.0
-chr1	7637849	.	TAATAATAATAA	.	.	.	END=7637860;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:21,28,0,0:4,21:NULL:332.138:366.612,131.36:0.0,0.0:0.0,4.61686e-06,0.999995	0/0:37:1.00001:4,4:4-4,4-4:21,12,0,4:4,21:3,4:226.901:326.675,113.385:0.0,0.0:0.0,1.6664e-06,1.0
-chr1	7642243	.	AACAACAACAACAACAACAACAACAAC	AACAACAACAACAACAACAACAACAACAAC	.	.	END=7642269;RU=aac;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.99301:10,10:9-10,9-10:18,14,0,4:9,2|10,16:5,2|7,1|9,1:244.852:366.612,131.36:0.323567,0.323567:0.0,1.39032e-05,0.999987	0/0:32:0.994938:9,9:9-10,9-10:11,13,0,7:9,11:4,2|6,1|7,1|8,3:214.352:326.675,113.385:0.46122,0.46122:3.66479e-24,0.00171286,0.998292
-chr1	7644073	.	GGGTGGGTGGGT	.	.	.	END=7644084;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.990731:3,3:3-3,3-3:11,24,0,2:3,11:2,2:274.989:366.612,131.36:0.0,0.0:3.1445e-32,0.00562824,0.994385	0/0:48:0.996096:3,3:3-3,3-3:12,36,0,0:3,12:NULL:366.483:326.675,113.385:0.0,0.0:1.17169e-35,0.00335808,0.996649
-chr1	7651115	.	TTTCTTTCTTTC	.	.	.	END=7651126;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999978:3,3:3-3,3-3:18,16,0,0:3,18:NULL:223.168:366.612,131.36:0.0,0.0:0.0,2.81898e-05,0.999972	0/0:26:0.99948:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.136:326.675,113.385:0.0,0.0:0.0,0.000349136,0.999652
-chr1	7652360	.	GAGAGAGAGAGAGAGAGA	GAGAGAGA,GAGAGAGAGAGAGA	.	.	END=7652377;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:49:0.999988:7,9:7-9,9-9:27,17,0,4:7,10|9,17:5,1|8,3:316.932:366.612,131.36:0.472766,0.0:5.84026e-33,0.999986,1.46053e-05	1/0:45:0.929022:4,9:4-9,9-9:29,15,0,0:4,5|7,5|9,19:NULL:288.077:326.675,113.385:1.79969,0.0:1.63191e-37,0.99934,0.000661574
-chr1	7658674	.	TTTATTTATTTA	.	.	.	END=7658685;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:221.295:366.612,131.36:0.0,0.0:0.0,1.78929e-06,1.0	0/0:48:1.0:3,3:3-3,3-3:30,12,0,6:3,30:2,6:271.917:326.675,113.385:0.0,0.0:0.0,2.61691e-09,1.0
-chr1	7660964	.	TGCCTGCCTGCCTGCC	.	.	.	END=7660979;RU=tgcc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999939:4,4:4-4,4-4:17,12,0,4:4,17:3,4:203.556:366.612,131.36:0.0,0.0:0.0,2.74925e-05,0.999972	0/0:27:0.999887:4,4:3-4,3-4:16,7,0,3:4,16:2,1|3,2:152.085:326.675,113.385:0.419363,0.419363:0.0,5.94852e-05,0.999941
-chr1	7660996	.	TCTTTCTTTCTTTCTT	.	.	.	END=7661011;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.992254:4,4:4-4,4-4:11,11,0,0:4,11:NULL:141.609:366.612,131.36:0.0,0.0:4.56328e-37,0.0052796,0.994732	0/0:22:0.999809:4,4:4-4,4-4:16,6,0,0:4,16:NULL:120.568:326.675,113.385:0.0,0.0:0.0,0.000139604,0.999864
-chr1	7661246	.	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTG	.	.	END=7661265;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.829463:9,9:8-12,8-12:15,17,0,2:8,2|9,13:6,1|7,1:244.023:366.612,131.36:1.45844,1.45844:0.999522,0.000480569,7.49084e-22	0/0:37:0.970158:10,10:10-11,10-11:20,12,0,5:10,17|11,3:5,1|6,1|7,1|8,2:243.239:326.675,113.385:0.374147,0.374147:2.30016e-25,9.69941e-06,0.999993
-chr1	7661271	.	TTGTTGTTGTTG	TTGTTGTTGTTGTTG	.	.	END=7661282;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:38:0.999729:4,5:4-5,5-5:18,20,0,0:4,3|5,15:NULL:266.92:366.612,131.36:0.425627,0.0:0.0,6.53169e-07,1.0	0/0:37:1.0:4,4:4-4,4-4:26,11,0,0:4,26:NULL:207.408:326.675,113.385:0.0,0.0:0.0,1.57076e-07,1.0
-chr1	7667977	.	GGGGTGGGGTGGGGT	.	.	.	END=7667991;RU=ggggt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:3,3:3-3,3-3:34,25,0,3:3,34:2,3:373.822:366.612,131.36:0.0,0.0:0.0,3.26358e-10,1.0	0/0:66:1.0:3,3:3-3,3-3:38,25,0,3:3,38:2,3:409.533:326.675,113.385:0.0,0.0:0.0,2.39564e-11,1.0
-chr1	7668272	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7668301;RU=ga;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.238356:24,29:23-26,26-30:4,11,0,7:23,2|24,2:8,1|15,1|17,1|19,1|28,3:182.126:366.612,131.36:0.77595,0.915079:0.0,0.0,1.0	0/0:63:0.999955:15,15:15-15,15-15:33,18,0,12:14,5|15,28:5,1|7,1|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,1:408.274:326.675,113.385:0.0990099,0.0990099:3.48e-39,4.78434e-05,0.999955
-chr1	7668463	.	GGAGAGGAGAGGAGA	.	.	.	END=7668477;RU=ggaga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999726:3,3:3-3,3-3:15,6,0,0:3,15:NULL:111.479:366.612,131.36:0.0,0.0:2.9388e-41,0.000137001,0.999865	0/0:22:0.884408:3,3:3-3,3-3:6,16,0,0:3,6:NULL:168.509:326.675,113.385:0.0,0.0:8.96207e-17,0.0784737,0.921624
-chr1	7678104	.	TGTTTTGTTTTGTTT	.	.	.	END=7678118;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.990119:3,3:3-3,3-3:10,6,0,0:3,10:NULL:96.8139:366.612,131.36:0.0,0.0:1.51957e-31,0.00544876,0.994565	0/0:25:0.999438:3,3:3-3,3-3:14,11,0,0:3,14:NULL:162.108:326.675,113.385:0.0,0.0:2.4e-44,0.00034485,0.999659
-chr1	7684673	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=7684693;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.992494:7,7:7-7,7-7:11,8,0,2:7,11:3,1|6,1:134.095:366.612,131.36:0.0,0.0:1.22226e-33,0.00318471,0.996822	0/0:29:0.998834:7,7:7-7,7-7:13,12,0,4:7,13:4,1|5,2|6,1:193.784:326.675,113.385:0.0,0.0:1.27248e-39,0.000558105,0.999446
-chr1	7686794	.	TTATTTATTTAT	.	.	.	END=7686805;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999415:3,3:3-3,3-3:14,11,0,0:3,14:NULL:159.567:366.612,131.36:0.0,0.0:0.0,0.000336862,0.999666	0/0:31:1.0:3,3:3-3,3-3:24,7,0,0:3,24:NULL:156.467:326.675,113.385:0.0,0.0:0.0,2.85844e-07,1.0
-chr1	7688060	.	TATATTATATTATAT	.	.	.	END=7688074;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997224:3,3:3-3,3-3:12,12,0,0:3,12:NULL:159.819:366.612,131.36:0.0,0.0:3.5616e-40,0.00164966,0.998353	0/0:21:0.99878:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.606:326.675,113.385:0.0,0.0:1.23e-43,0.000718745,0.999286
-chr1	7691107	.	CATCATCATCAT	.	.	.	END=7691118;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:61:1.0:4,4:4-4,4-4:43,16,0,2:4,43:3,2:325.445:366.612,131.36:0.0,0.0:0.0,4.72132e-13,1.0	0/0:56:1.0:4,4:4-4,4-4:35,17,0,4:4,35:3,4:322.898:326.675,113.385:0.0,0.0:0.0,7.26367e-11,1.0
-chr1	7694774	.	GTTGTTGTTGTTGTTGTT	.	.	.	END=7694791;RU=gtt;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999814:6,6:5-6,5-6:16,16,0,0:6,16:NULL:210.71:366.612,131.36:0.35561,0.35561:1.7937e-41,0.000124117,0.999879	0/0:22:0.9979:6,6:6-6,6-6:12,8,0,2:6,12:4,1|5,1:136.005:326.675,113.385:0.0,0.0:5.14711e-31,0.00100407,0.998998
-chr1	7694925	.	AAAAACAAAAAACAAAAAACA	.	.	.	END=7694945;RU=aaaaaca;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.994642:3,3:3-3,3-3:11,14,0,0:3,11:NULL:172.931:366.612,131.36:0.0,0.0:6.27708e-36,0.0041541,0.995855	0/0:24:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:116.335:326.675,113.385:0.0,0.0:0.0,3.64749e-06,1.0
-chr1	7695814	.	GTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=7695835;RU=gt;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:0.999993:11,11:6-11,6-11:29,16,0,7:10,3|11,26:6,2|8,2|9,2|11,1:338.434:366.612,131.36:1.08686,1.08686:6e-44,9.69241e-06,0.999993	0/1:28:0.293335:11,15:11-11,11-15:16,6,0,5:11,16:7,1|10,3|15,1:170.999:326.675,113.385:0.0,1.9624:1.21793e-27,7.70312e-08,1.0
-chr1	7695943	.	ATTTATTTATTTATTT	ATTT	.	.	END=7695958;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.100699:1,1:1-3,1-3:0,24,0,0:NULL:NULL:233.385:366.612,131.36:0.681228,0.681228:0.674214,0.300808,0.0250224	0/0:28:0.999907:4,4:4-4,4-4:17,11,0,0:4,17:NULL:160.39:326.675,113.385:0.0,0.0:1.4e-44,5.94761e-05,0.999941
-chr1	7696936	.	AAGGAAGGAAGG	.	.	.	END=7696947;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.9998:3,3:3-3,3-3:16,12,0,0:3,16:NULL:175.238:366.612,131.36:0.0,0.0:0.0,9.38424e-05,0.999909	0/0:49:1.0:3,3:3-3,3-3:26,21,0,2:3,26:2,2:311.19:326.675,113.385:0.0,0.0:0.0,4.7513e-08,1.0
-chr1	7708555	.	TATATATATATATATATATATATATATATATATATATATA	TATATATATATATATATATATATATA	.	.	END=7708594;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.727258:13,13:5-13,5-13:7,6,0,0:13,7:NULL:87.3032:366.612,131.36:3.78047,3.78047:1.0,0.0,0.0	0/0:4:0.210509:20,20:19-20,19-20:2,2,0,0:20,2:NULL:27.8346:326.675,113.385:0.284901,0.284901:0.0129125,0.424261,0.562949
-chr1	7714389	.	TTTATTTATTTA	.	.	.	END=7714400;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999999:3,3:3-3,3-3:18,15,0,2:3,18:2,2:224.081:366.612,131.36:0.0,0.0:0.0,1.10948e-05,0.999993	0/0:21:0.998997:3,3:3-3,3-3:13,6,0,2:3,13:2,2:118.63:326.675,113.385:0.0,0.0:5.2e-44,0.000355482,0.999645
-chr1	7716510	.	TTCTTCTTCTTC	.	.	.	END=7716521;RU=ttc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:31,21,0,0:4,31:NULL:313.248:366.612,131.36:0.0,0.0:0.0,3.48626e-09,1.0	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:219.121:326.675,113.385:0.0,0.0:0.0,4.9399e-07,1.0
-chr1	7722901	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=7722920;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.809748:4,4:4-4,4-4:4,18,0,3:4,4:3,3:206.834:366.612,131.36:0.0,0.0:5.48788e-15,0.0990296,0.90107	0/0:15:0.993087:4,4:4-4,4-4:11,4,0,0:4,11:NULL:82.8366:326.675,113.385:0.0,0.0:1.07704e-37,0.00430158,0.995711
-chr1	7726872	.	GCATGCATGCAT	.	.	.	END=7726883;RU=gcat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:27,15,0,0:3,27:NULL:242.362:366.612,131.36:0.0,0.0:0.0,6.85042e-08,1.0	0/0:38:1.0:3,3:3-3,3-3:25,8,0,5:3,25:2,5:204.689:326.675,113.385:0.0,0.0:0.0,6.51567e-08,1.0
-chr1	7730158	.	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC,TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC,TTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCC	.	.	END=7730267;RU=ttccc;PERIOD=5;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.235495:18,20:18-18,19-23:6,5,0,13:18,6:4,1|5,1|6,2|7,1|8,2|13,1|14,1|17,1|19,1|20,2:177.152:366.612,131.36:0.557277,1.07269:0.399266,0.600796,5.83373e-27	3/3:37:0.0548084:21,21:8-23,8-23:0,12,0,22:NULL:3,1|4,2|5,1|8,1|9,1|10,1|11,2|13,1|14,2|16,3|18,1|19,2|20,4:268.821:326.675,113.385:5.02335,5.02335:0.261242,0.509873,0.228898
-chr1	7730913	.	TTATTTATTTAT	.	.	.	END=7730924;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-3,3-3:20,14,0,0:3,20:NULL:204.163:366.612,131.36:0.0,0.0:0.0,2.67187e-06,1.0	0/0:31:0.999976:3,3:3-3,3-3:17,12,0,2:3,17:2,2:191.298:326.675,113.385:0.0,0.0:0.0,1.77926e-05,0.999986
-chr1	7730966	.	TTAATTAATTAA	.	.	.	END=7730977;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:3,3:3-3,3-3:22,7,0,0:3,22:NULL:151.309:366.612,131.36:0.0,0.0:0.0,6.24065e-07,1.0	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:181.216:326.675,113.385:0.0,0.0:0.0,4.03032e-06,0.999995
-chr1	7731592	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=7731635;RU=tc;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:49:0.326748:25,28:25-25,24-30:10,25,0,14:24,3|25,7:4,1|5,1|9,1|13,1|15,1|16,1|17,1|18,1|19,1|21,1|22,2|27,1|28,1:400.056:366.612,131.36:0.0990099,1.45096:0.0,3.79329e-14,1.0	0/1:40:0.564427:22,24:21-22,21-24:10,17,0,12:21,4|22,6:9,1|11,3|13,1|18,1|19,1|21,3|22,1|24,1:316.193:326.675,113.385:0.298675,1.12871:1.40782e-18,0.000296911,0.999705
-chr1	7731916	.	TGTATGTATGTA	.	.	.	END=7731927;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:19,18,0,4:3,19:2,4:275.074:366.612,131.36:0.0,0.0:0.0,7.01978e-06,0.999994	0/0:22:0.999697:3,3:3-3,3-3:15,7,0,0:3,15:NULL:122.413:326.675,113.385:0.0,0.0:0.0,0.00016162,0.999841
-chr1	7731957	.	TGTATGTATGTA	.	.	.	END=7731968;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:245.533:366.612,131.36:0.0,0.0:0.0,3.28198e-07,1.0	0/0:26:0.999966:3,3:3-3,3-3:18,6,0,2:3,18:2,2:143.569:326.675,113.385:0.0,0.0:0.0,1.6661e-05,0.999986
-chr1	7732202	.	GGTTGGGTTGGGTTG	.	.	.	END=7732216;RU=ggttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:287.468:366.612,131.36:0.0,0.0:0.0,2.66084e-07,1.0	0/0:26:0.999927:3,3:3-3,3-3:17,9,0,0:3,17:NULL:154.298:326.675,113.385:0.0,0.0:0.0,5.22394e-05,0.999949
-chr1	7736177	.	CACACACACACACA	.	.	.	END=7736190;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999598:7,7:4-7,4-7:15,16,0,4:7,15:5,1|6,3:242.359:366.612,131.36:1.29472,1.29472:1.71162e-36,0.000150262,0.99985	0/0:31:0.977661:7,7:6-7,6-7:21,6,0,4:6,2|7,19:5,1|6,3:179.53:326.675,113.385:0.412766,0.412766:7.098e-42,0.0223881,0.977653
-chr1	7741556	.	CTCTCTCTCTCT	.	.	.	END=7741567;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999959:6,6:6-6,6-6:18,3,0,0:6,18:NULL:99.8163:366.612,131.36:0.0,0.0:0.0,2.33026e-05,0.999979	0/0:39:1.0:6,6:6-6,6-6:23,16,0,0:6,23:NULL:239.065:326.675,113.385:0.0,0.0:0.0,9.61291e-07,1.0
-chr1	7742062	.	GTGGTGGTGGTGGTGGTGGTGGTGGTG	GTGGTGGTGGTGGTG	.	.	END=7742088;RU=gtg;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:65:0.80763:5,9:5-9,9-9:21,39,0,5:5,2|9,19:5,2|7,1|8,1|9,1:493.627:366.612,131.36:1.99912,0.0:0.0,0.80792,0.192135	0/0:62:0.919382:9,9:5-9,5-9:26,32,0,4:5,2|8,2|9,22:6,1|8,3:453.025:326.675,113.385:1.77932,1.77932:0.0,0.0807176,0.919377
-chr1	7750668	.	AGGAGGAGGAGGAGGAGG	.	.	.	END=7750685;RU=agg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999891:6,6:6-6,6-6:16,19,0,3:6,16:4,2|5,1:262.318:366.612,131.36:0.0,0.0:1e-44,6.22465e-05,0.99994	0/0:53:1.0:6,6:6-6,6-6:31,16,0,5:6,31:3,2|5,3:309.142:326.675,113.385:0.0,0.0:0.0,1.43422e-09,1.0
-chr1	7751603	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=7751648;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.924204:20,20:19-20,19-20:11,13,0,15:19,2|20,9:5,2|7,1|8,1|10,1|11,1|12,2|15,2|18,3|19,2:286.55:366.612,131.36:0.284901,0.284901:0.999339,0.000667048,6.53359e-23	0/0:53:0.902676:23,23:23-24,23-24:8,19,0,25:23,8:5,1|7,2|8,2|9,1|10,2|11,2|12,2|13,1|14,1|16,1|17,1|18,2|19,1|20,2|21,3|22,1:408.968:326.675,113.385:0.398507,0.398507:7.15271e-09,0.0285055,0.971546
-chr1	7753197	.	CATACATACATACATACATACATACATACATACATA	CATACATACATACATACATACATACATACATACATACATA	.	.	END=7753232;RU=cata;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999229:10,10:10-10,10-10:13,21,0,15:10,13:4,3|5,3|7,2|8,4|9,3:359.982:366.612,131.36:0.0,0.0:0.0,3.85728e-05,0.999963	0/0:48:1.0:9,9:9-9,9-9:19,13,0,15:9,19:3,1|4,3|5,5|6,2|7,1|8,3:306.119:326.675,113.385:0.0,0.0:3.61896e-38,5.86017e-06,0.999995
-chr1	7754174	.	TTGTCCCTTGTCCCTTGTCCC	.	.	.	END=7754194;RU=ttgtccc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.998875:3,3:3-3,3-3:13,10,0,0:3,13:NULL:141.821:366.612,131.36:0.0,0.0:7.13e-43,0.000787695,0.999217	0/0:30:1.00001:3,3:3-3,3-3:21,7,0,2:3,21:2,2:165.233:326.675,113.385:0.0,0.0:0.0,1.73527e-06,1.0
-chr1	7756374	.	GTGGGTGGGTGG	.	.	.	END=7756385;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:28,10,0,3:3,28:2,3:226.375:366.612,131.36:0.0,0.0:0.0,6.78654e-09,1.0	0/0:58:1.00001:3,3:3-3,3-3:21,35,0,2:3,21:2,2:419.101:326.675,113.385:0.0,0.0:0.0,2.44914e-06,1.0
-chr1	7757086	.	TAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTATAGTA	TAGTATAGTATAGTATAGTATAGTATAGTA	.	.	END=7757130;RU=tagta;PERIOD=5;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:1.0:6,6:6-6,6-6:29,11,0,5:6,29:2,2|4,1|5,2:253.025:366.612,131.36:0.0,0.0:1.0,3.5764e-09,0.0	0/0:38:0.999994:9,9:6-9,6-9:19,12,0,6:9,19:2,2|3,1|6,1|7,1|8,1:237.37:326.675,113.385:0.810189,0.810189:3e-45,1.63925e-05,0.999986
-chr1	7769821	.	TAAATAAATAAA	.	.	.	END=7769832;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:268.979:366.612,131.36:0.0,0.0:0.0,4.49312e-08,1.0	0/0:29:1.00001:3,3:3-3,3-3:21,8,0,0:3,21:NULL:151.86:326.675,113.385:0.0,0.0:0.0,2.38585e-06,1.0
-chr1	7771289	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=7771316;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.0:6,6:6-6,6-6:20,14,0,3:6,20:2,1|4,2:235.568:366.612,131.36:0.0,0.0:1.0,2.87929e-06,5.2e-44	0/0:21:0.997637:7,7:7-7,7-7:12,7,0,2:7,12:2,1|6,1:126.413:326.675,113.385:0.0,0.0:1.45808e-39,0.0012583,0.998747
-chr1	7771869	.	TCTTTCTTTCTTTCTTTCTT	.	.	.	END=7771888;RU=tctt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999699:5,5:5-5,5-5:14,16,0,4:5,14:2,1|4,3:230.877:366.612,131.36:0.0,0.0:1.21585e-40,0.000162183,0.999841	0/0:23:0.999415:5,5:5-5,5-5:14,6,0,3:5,14:2,1|3,1|4,1:137.823:326.675,113.385:0.0,0.0:4.70182e-40,0.000351915,0.999651
-chr1	7774572	.	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	.	.	END=7774631;RU=tctt;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:22:1.0:10,12:10-10,12-12:12,8,0,2:10,6|12,6:6,1|11,1:147.747:366.612,131.36:0.19802,0.0:1.0,5.84118e-14,1.27227e-40	0/0:28:0.909649:15,15:14-15,14-15:6,12,0,9:15,6:4,2|6,1|8,1|12,1|13,1|14,3:205.97:326.675,113.385:0.469019,0.469019:1.82433e-14,0.0521929,0.947889
-chr1	7774898	.	GAGAAGAGAAGAGAAGAGAAGAGAAGAGAA	GAGAA	.	.	END=7774927;RU=gagaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.0866575:1,1:1-3,1-3:0,30,0,0:NULL:NULL:265.586:366.612,131.36:0.628849,0.628849:0.821411,0.173243,0.00542432	0/0:24:0.404266:6,6:3-6,3-6:3,18,0,3:6,3:3,1|5,2:195.218:326.675,113.385:1.06683,1.06683:4.95948e-08,0.451993,0.54812
-chr1	7778042	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=7778123;RU=ga;PERIOD=2;REF=41.0;EXPTHRESH=41	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.0487611:20,20:18-21,18-21:0,17,0,10:NULL:5,1|6,1|8,2|9,2|14,2|19,1|20,1:233.463:366.612,131.36:0.774179,0.774179:1.0,0.0,0.0	1/2:32:0.0276154:20,52:14-52,31-53:0,16,0,16:NULL:4,1|7,1|10,1|12,3|15,1|18,2|20,1|28,2|39,1|45,2|52,1:284.165:326.675,113.385:12.7726,4.55678:9.26909e-22,0.769413,0.230618
-chr1	7779108	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACAC	.	.	END=7779135;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.998802:10,10:10-10,10-10:14,12,0,8:10,14:4,1|5,2|6,2|8,3:230.951:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:22:0.993219:14,14:14-15,14-15:11,5,0,5:14,11:6,2|8,1|11,1|13,1:133.13:326.675,113.385:0.35561,0.35561:3.71014e-16,0.00236198,0.997647
-chr1	7781851	.	AACAAAACAAAACAA	.	.	.	END=7781865;RU=aacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:212.897:366.612,131.36:0.0,0.0:0.0,5.38134e-06,0.999995	0/0:38:1.0:3,3:3-3,3-3:25,13,0,0:3,25:NULL:214.334:326.675,113.385:0.0,0.0:0.0,2.10585e-07,1.0
-chr1	7788005	.	ACCCACCCACCC	.	.	.	END=7788016;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999289:3,3:3-3,3-3:14,22,0,0:3,14:NULL:248.527:366.612,131.36:0.0,0.0:2.657e-42,0.00049849,0.999506	0/0:27:0.999849:3,3:3-3,3-3:16,11,0,0:3,16:NULL:167.991:326.675,113.385:0.0,0.0:0.0,0.000115193,0.999887
-chr1	7795035	.	ACCCACCCACCC	.	.	.	END=7795046;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.992668:3,3:3-3,3-3:11,18,0,0:3,11:NULL:205.859:366.612,131.36:0.0,0.0:1.09167e-32,0.00539508,0.994618	0/0:39:0.998387:3,3:3-3,3-3:13,26,0,0:3,13:NULL:287.107:326.675,113.385:0.0,0.0:2.00258e-38,0.00140911,0.998595
-chr1	7798081	.	TATTTTATTTTATTT	TATTT	.	.	END=7798095;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:20:0.496895:1,3:1-3,1-3:2,18,0,0:3,2:NULL:174.067:366.612,131.36:0.999559,0.623055:2.27498e-07,0.624351,0.375705	0/0:27:0.999956:3,3:3-3,3-3:17,10,0,0:3,17:NULL:157.95:326.675,113.385:0.0,0.0:0.0,3.8157e-05,0.999964
-chr1	7799463	.	ATGATGATGATG	.	.	.	END=7799474;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:27,22,0,2:4,27:3,2:322.329:366.612,131.36:0.0,0.0:0.0,4.87752e-08,1.0	0/0:38:1.0:4,4:4-4,4-4:30,8,0,0:4,30:NULL:188.498:326.675,113.385:0.0,0.0:0.0,6.34163e-09,1.0
-chr1	7801805	.	GTGGGTGGGTGG	.	.	.	END=7801816;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:223.028:366.612,131.36:0.0,0.0:0.0,1.55783e-06,1.0	0/0:37:0.999994:3,3:3-3,3-3:19,16,0,2:3,19:2,2:233.35:326.675,113.385:0.0,0.0:0.0,1.24675e-05,0.999987
-chr1	7803754	.	ACCCACCCACCC	.	.	.	END=7803765;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999118:3,3:3-3,3-3:14,17,0,0:3,14:NULL:212.631:366.612,131.36:0.0,0.0:1.415e-42,0.000604116,0.9994	0/0:34:0.96189:3,3:3-3,3-3:8,26,0,0:3,8:NULL:262.362:326.675,113.385:0.0,0.0:5.20764e-25,0.0283073,0.971747
-chr1	7815175	.	TTGTTGTTGTTG	.	.	.	END=7815186;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:190.375:366.612,131.36:0.0,0.0:0.0,1.82115e-07,1.0	0/0:27:0.99998:4,4:4-5,4-5:18,6,0,2:4,18:3,2:140.519:326.675,113.385:0.284901,0.284901:2.1276e-41,1.56478e-05,0.999986
-chr1	7815188	.	TAGTAGTAGTAGTAGTAGTAG	.	.	.	END=7815208;RU=tag;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:7,7:7-7,7-7:21,12,0,5:7,21:5,1|6,4:233.821:366.612,131.36:0.0,0.0:0.0,1.60282e-06,1.0	0/0:25:0.999849:7,7:7-7,7-7:16,6,0,3:7,16:4,1|6,2:141.732:326.675,113.385:0.0,0.0:2.43164e-35,5.96846e-05,0.999941
-chr1	7817458	.	TTAATTAATTAA	.	.	.	END=7817469;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.983662:3,3:3-3,3-3:10,16,0,0:3,10:NULL:185.333:366.612,131.36:0.0,0.0:8.74342e-33,0.0118355,0.988189	0/0:14:0.929308:3,3:3-3,3-3:7,7,0,0:3,7:NULL:89.6001:326.675,113.385:0.0,0.0:1.61186e-23,0.0389226,0.961144
-chr1	7819272	.	ACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=7819295;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.31213:18,25:18-18,18-28:8,12,0,13:18,8:5,2|8,1|9,1|12,2|16,2|17,3|24,1|25,1:256.603:366.612,131.36:0.0,2.54892:0.0,0.0,1.0	0/0:29:0.987278:12,12:11-12,11-12:14,11,0,4:11,2|12,12:8,2|9,1|10,1:196.047:326.675,113.385:0.236383,0.236383:1.05692e-17,0.0116967,0.98833
-chr1	7819739	.	ACCTGGGACGAGAAAACCTGGGACGAGAAAACCTGGGACGAGAAA	ACCTGGGACGAGAAAACCTGGGACGAGAAA	.	.	END=7819783;RU=acctgggacgagaaa;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.993555:2,2:2-2,2-2:11,14,0,0:2,11:NULL:183.204:366.612,131.36:0.0,0.0:0.99902,0.000983438,1.21058e-16	0/0:16:0.993527:3,3:3-3,3-3:11,5,0,0:3,11:NULL:95.4833:326.675,113.385:0.0,0.0:5.11705e-14,0.0047793,0.995235
-chr1	7820296	.	AAAAGAAAAGAAAAG	.	.	.	END=7820310;RU=aaaag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.973171:3,3:3-3,3-3:9,11,0,0:3,9:NULL:136.448:366.612,131.36:0.19802,0.19802:7.20979e-29,0.0185596,0.981481	0/0:23:0.999993:3,3:3-3,3-3:19,4,0,0:3,19:NULL:113.7:326.675,113.385:0.0,0.0:0.0,1.19035e-05,0.999987
-chr1	7821542	.	TTTGTTTGTTTG	.	.	.	END=7821553;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:195.874:366.612,131.36:0.0,0.0:0.0,4.49495e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:21,12,0,0:3,21:NULL:185.675:326.675,113.385:0.0,0.0:0.0,4.07183e-06,0.999995
-chr1	7823455	.	TTTATTTATTTA	.	.	.	END=7823466;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.0:3,3:3-3,3-3:19,9,0,0:3,19:NULL:156.071:366.612,131.36:0.0,0.0:0.0,1.02177e-05,0.999993	0/0:23:0.999854:3,3:3-3,3-3:16,7,0,0:3,16:NULL:122.28:326.675,113.385:0.0,0.0:0.0,7.10557e-05,0.999932
-chr1	7838440	.	CTGCTGCTGCTG	.	.	.	END=7838451;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:19,9,0,3:4,19:3,3:182.054:366.612,131.36:0.0,0.0:0.0,7.13775e-06,0.999994	0/0:36:1.0:4,4:4-4,4-4:21,15,0,0:4,21:NULL:224.091:326.675,113.385:0.0,0.0:0.0,8.09682e-06,0.999994
-chr1	7840652	.	ACCCACCCACCC	.	.	.	END=7840663;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:5:0.633775:3,3:3-3,3-3:4,1,0,0:3,4:NULL:24.55:366.612,131.36:0.0,0.0:1.78363e-11,0.150741,0.849338	0/0:23:0.990279:3,3:3-3,3-3:10,13,0,0:3,10:NULL:152.789:326.675,113.385:0.0,0.0:1.10363e-26,0.00576428,0.994249
-chr1	7849736	.	GGGTGGGTGGGT	GGGT	.	.	END=7849747;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0580046:1,1:1-3,1-3:0,9,0,0:NULL:NULL:83.0494:366.612,131.36:1.03018,1.03018:0.182364,0.502118,0.315633	0/0:27:0.993975:3,3:3-3,3-3:10,15,0,2:3,10:2,2:188.748:326.675,113.385:0.0,0.0:1.60427e-28,0.00273042,0.997276
-chr1	7851717	.	ATTTTTTTATTTTTTTATTTTTTT	.	.	.	END=7851740;RU=attttttt;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.995889:3,3:3-3,3-3:11,6,0,0:3,11:NULL:101.894:366.612,131.36:0.0,0.0:7.14769e-35,0.00241098,0.997595	0/0:15:0.943631:3,3:3-3,3-3:7,6,0,2:3,7:2,2:99.6613:326.675,113.385:0.0,0.0:2.55924e-22,0.0283061,0.971747
-chr1	7857369	.	TTTAATTTAATTTAATTTAATTTAA	TTTAATTTAATTTAATTTAATTTAATTTAA	.	.	END=7857393;RU=tttaa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.981201:6,6:4-6,4-6:10,3,0,0:6,10:NULL:69.5344:366.612,131.36:0.985733,0.985733:4.18017e-39,0.0116041,0.98842	0/0:26:0.999993:5,5:5-5,5-5:19,7,0,0:5,19:NULL:141.068:326.675,113.385:0.0,0.0:0.0,1.77228e-05,0.999986
-chr1	7861967	.	TTTGTTTTGTTTTGT	.	.	.	END=7861981;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:26,24,0,2:3,26:2,2:334.791:366.612,131.36:0.0,0.0:0.0,1.30562e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:26,5,0,4:3,26:2,4:173.888:326.675,113.385:0.0,0.0:0.0,3.36513e-08,1.0
-chr1	7863803	.	TAAGATTAAGATTAAGAT	.	.	.	END=7863820;RU=taagat;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999948:3,3:3-3,3-3:17,21,0,0:3,17:NULL:268.794:366.612,131.36:0.0,0.0:0.0,5.8172e-05,0.999942	0/0:32:1.0:3,3:3-3,3-3:23,9,0,0:3,23:NULL:178.778:326.675,113.385:0.0,0.0:0.0,8.92912e-07,1.0
-chr1	7867431	.	AAACAAACAAACAAAC	.	.	.	END=7867446;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:34,12,0,0:4,34:NULL:255.579:366.612,131.36:0.0990099,0.0990099:0.0,5.22199e-10,1.0	0/0:44:1.0:4,4:4-4,4-4:25,16,0,3:4,25:2,2|3,1:271.543:326.675,113.385:0.0,0.0:0.0,1.07199e-07,1.0
-chr1	7871205	.	ATTTATTTATTTATTTATTT	.	.	.	END=7871224;RU=attt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:5,5:5-5,5-5:27,16,0,5:5,27:2,2|3,2|4,1:299.309:366.612,131.36:0.0,0.0:0.0,1.8124e-08,1.0	0/0:37:0.999962:5,5:5-5,5-5:17,13,0,7:5,17:3,4|4,3:240.395:326.675,113.385:0.0,0.0:0.0,3.07993e-05,0.999971
-chr1	7879267	.	AAGAAAGAAAGA	.	.	.	END=7879278;RU=aaga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:226.5:366.612,131.36:0.0,0.0:0.0,1.94776e-06,1.0	0/0:36:1.0:3,3:3-3,3-3:26,7,0,3:3,26:2,3:185.156:326.675,113.385:0.0,0.0:0.0,3.62187e-08,1.0
-chr1	7881454	.	GACAGACAGACA	.	.	.	END=7881465;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.995138:3,3:3-3,3-3:11,19,0,0:3,11:NULL:223.799:366.612,131.36:0.0,0.0:3.50654e-37,0.00251302,0.997495	0/0:51:1.0:3,3:3-3,3-3:29,18,0,4:3,29:2,4:308.153:326.675,113.385:0.0,0.0:0.0,5.51923e-09,1.0
-chr1	7883786	.	ATTTATTTATTTATTTATTTATTT	ATTT	.	.	END=7883809;RU=attt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:31:0.999929:6,6:6-6,6-6:17,10,0,4:6,17:3,1|4,1|5,1|6,1:191.156:326.675,113.385:0.0,0.0:0.0,2.64831e-05,0.999978
-chr1	7887170	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=7887201;RU=tttg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:43:0.988754:8,8:6-8,6-8:26,13,0,4:6,2|8,24:4,1|6,2|7,1:278.17:326.675,113.385:0.904844,0.904844:0.0,0.0112725,0.988754
-chr1	7888946	.	GACAGACAGACA	.	.	.	END=7888957;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.615416:3,3:3-3,3-3:4,0,0,0:3,4:NULL:15.6225:366.612,131.36:0.0,0.0:8.99095e-14,0.154049,0.84603	0/0:39:1.0:3,3:3-3,3-3:28,11,0,0:3,28:NULL:210.054:326.675,113.385:0.0,0.0:0.0,1.55212e-08,1.0
-chr1	7891093	.	ATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATAT	.	.	END=7891130;RU=at;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0554638:18,18:17-20,17-20:0,15,0,2:NULL:12,2:149.827:366.612,131.36:1.15947,1.15947:0.220319,0.514231,0.265508	0/0:12:0.647398:19,19:18-22,18-22:6,4,0,0:19,6:NULL:62.7653:326.675,113.385:1.28538,1.28538:2.63552e-05,0.140772,0.859295
-chr1	7891383	.	TGTTTTGTTTTGTTT	.	.	.	END=7891397;RU=tgttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:243.922:366.612,131.36:0.0,0.0:0.0,1.33914e-07,1.0	0/0:25:0.999915:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.421:326.675,113.385:0.0,0.0:0.0,5.49623e-05,0.999948
-chr1	7892968	.	AATAATAATAAT	.	.	.	END=7892979;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:201.513:366.612,131.36:0.0,0.0:0.0,4.54687e-06,0.999995	0/0:33:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:180.598:326.675,113.385:0.0,0.0:0.0,7.9396e-07,1.0
-chr1	7895098	.	TTTTGTTTTGTTTTG	.	.	.	END=7895112;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.395108:3,3:1-3,1-3:3,22,0,0:3,3:NULL:218.472:366.612,131.36:0.734944,0.734944:2.0804e-10,0.469974,0.530126	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:242.509:326.675,113.385:0.0,0.0:0.0,1.08537e-07,1.0
-chr1	7898220	.	ATAGATAGATAG	.	.	.	END=7898231;RU=atag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:23,12,0,3:3,23:2,3:218.714:366.612,131.36:0.0,0.0:0.0,2.8081e-07,1.0	0/0:42:1.00001:3,3:3-3,3-3:21,18,0,3:3,21:2,3:272.183:326.675,113.385:0.0,0.0:0.0,1.8962e-06,1.0
-chr1	7902277	.	CTCTCTTGCTCTCTTGCTCTCTTGCTCTCTTG	.	.	.	END=7902308;RU=ctctcttg;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:0.999986:4,4:4-4,4-4:18,24,0,6:4,18:2,1|3,5:336.429:366.612,131.36:0.0,0.0:0.0,2.38834e-05,0.999979	0/0:40:0.999988:4,4:4-4,4-4:19,18,0,3:4,19:3,3:267.977:326.675,113.385:0.0,0.0:0.0,2.09661e-05,0.999979
-chr1	7902333	.	CTCTCCTCTCCTCTC	.	.	.	END=7902347;RU=ctctc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999995:3,3:3-3,3-3:19,17,0,0:3,19:NULL:233.639:366.612,131.36:0.0,0.0:0.0,1.28276e-05,0.999987	0/0:37:1.0:3,3:3-3,3-3:22,13,0,2:3,22:2,2:226.959:326.675,113.385:0.0,0.0:0.0,1.32696e-06,1.0
-chr1	7902723	.	CACCCCACCCCACCCCACCC	.	.	.	END=7902742;RU=caccc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999145:4,4:4-4,4-4:13,15,0,3:4,13:3,2|4,1:210.981:366.612,131.36:0.0,0.0:0.0,0.000394074,0.999607	0/0:33:0.999912:4,4:4-4,4-4:16,14,0,3:4,16:3,3:212.011:326.675,113.385:0.0,0.0:0.0,5.59225e-05,0.999947
-chr1	7904296	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7904335;RU=tg;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.99201:9,9:8-9,8-9:15,10,0,7:8,2|9,13:4,2|5,1|6,2|7,2:215.141:366.612,131.36:0.169767,0.169767:1.0,0.0,0.0	0/2:33:0.704436:20,21:19-20,18-21:9,7,0,16:19,2|20,5|21,2:5,3|6,2|12,2|13,1|15,1|16,2|17,2|18,1|19,2:238.51:326.675,113.385:0.469854,0.98424:1.38315e-07,0.101529,0.898575
-chr1	7906023	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=7906042;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999855:5,5:5-5,5-5:16,12,0,3:5,16:3,2|4,1:194.783:366.612,131.36:0.0,0.0:0.0,6.73828e-05,0.999933	0/0:37:1.0:5,5:5-5,5-5:24,6,0,7:5,24:2,1|3,4|4,2:198.611:326.675,113.385:0.0,0.0:0.0,1.73549e-07,1.0
-chr1	7909399	.	TCTATCTATCTA	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	.	.	END=7909410;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:38:0.316243:3,14:3-3,14-16:15,17,0,6:3,15:2,2|14,4:267.265:366.612,131.36:0.0,1.27219:0.0,2.12252e-29,1.0	0/1:16:0.290253:3,14:3-3,3-15:5,9,0,2:3,5:13,1|14,1:119.213:326.675,113.385:0.0,4.03871:2.8659e-27,6.00102e-14,1.0
-chr1	7915045	.	GTGTGTGTGTGT	GTGTGTGTGTGTGT	.	.	END=7915056;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.999418:7,7:6-10,6-10:14,23,0,3:7,14:5,1|6,1|7,1:282.392:366.612,131.36:1.3654,1.3654:0.0,8.56386e-05,0.999917	0/0:29:0.965444:6,6:6-8,6-8:9,18,0,0:6,9:NULL:198.063:326.675,113.385:0.856192,0.856192:9.95762e-17,0.0222382,0.977805
-chr1	7926986	.	CAAAACAAAACAAAACAAAACAAAACAAAA	CAAAA	.	.	END=7927015;RU=caaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:56:1.0:6,6:6-6,6-6:27,24,0,5:6,27:2,1|3,2|4,1|5,1:368.58:326.675,113.385:0.0,0.0:0.0,5.05438e-08,1.0
-chr1	7937066	.	ACACACACACACAC	.	.	.	END=7937079;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:22:0.999137:7,7:7-8,7-8:14,5,0,2:7,14:5,2:116.11:326.675,113.385:0.253975,0.253975:5.97146e-25,0.000346904,0.999658
-chr1	7937514	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GT	.	.	END=7937567;RU=gt;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:0.848815:27,27:25-27,25-27:7,9,0,12:27,7:4,1|11,1|12,1|13,1|16,2|17,1|19,1|20,1|21,1|23,2:208.109:326.675,113.385:0.669764,0.669764:4.12169e-09,0.0626275,0.937463
-chr1	7939725	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC	.	.	END=7939776;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:46:0.598119:26,26:23-26,23-26:4,21,0,20:26,4:5,1|6,3|7,1|8,1|9,3|11,1|15,1|16,1|18,1|19,1|20,2|21,1|25,2|26,1:369.806:326.675,113.385:1.00893,1.00893:6.09719e-14,0.206923,0.793123
-chr1	7939777	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=7939814;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/2:31:0.342097:19,26:19-19,18-27:15,13,0,3:18,2|19,13:18,1|21,1|26,1:228.743:326.675,113.385:0.0,3.06477:5.61739e-33,5.98841e-12,1.0
-chr1	7967867	.	AAACAAACAAACAAACAAAC	.	.	.	END=7967886;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:5,5:5-5,5-5:23,16,0,2:5,23:3,1|4,1:254.919:366.612,131.36:0.0,0.0:0.0,7.37833e-07,1.0	0/0:28:0.997946:5,5:5-5,5-5:12,11,0,5:5,12:2,1|3,1|4,3:180.598:326.675,113.385:0.0,0.0:1.398e-42,0.000923213,0.999081
-chr1	7968753	.	AAGCAAGCAAGC	.	.	.	END=7968764;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999979:3,3:3-3,3-3:18,7,0,0:3,18:NULL:132.608:366.612,131.36:0.0,0.0:0.0,1.75045e-05,0.999986	0/0:15:0.96209:3,3:3-3,3-3:8,7,0,0:3,8:NULL:94.2688:326.675,113.385:0.0,0.0:3.25334e-27,0.0200543,0.979987
-chr1	7969719	.	AAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAAT	.	.	END=7969738;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.999939:6,6:6-6,6-6:17,9,0,3:6,17:3,1|5,2:167.937:366.612,131.36:0.0,0.0:0.0,9.13269e-06,0.999993	0/0:13:0.977978:5,5:5-5,5-5:9,4,0,0:5,9:NULL:72.6275:326.675,113.385:0.0,0.0:3.47392e-30,0.0125675,0.987461
-chr1	7986821	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAACAAACAAACAAAC	.	.	END=7986852;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:1.0:9,9:9-9,9-9:19,13,0,9:9,19:3,2|5,1|6,3|8,3:265.268:366.612,131.36:0.0,0.0:0.0,1.16032e-06,1.0	0/0:43:0.999515:8,8:8-8,8-8:14,14,0,15:8,14:3,2|4,1|5,5|6,4|7,3:291.605:326.675,113.385:0.0,0.0:2.75757e-38,0.000194398,0.99981
-chr1	8003962	.	TTGTTTGTTTGT	.	.	.	END=8003973;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999578:3,3:3-3,3-3:15,10,0,0:3,15:NULL:156.054:366.612,131.36:0.0,0.0:0.0,0.000284195,0.999719	0/0:16:0.883694:3,3:3-3,3-3:6,10,0,0:3,6:NULL:118.129:326.675,113.385:0.0,0.0:9.06063e-21,0.0639908,0.936099
-chr1	8004898	.	AAGGAAGGAAGG	.	.	.	END=8004909;RU=aagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:23,25,0,2:3,23:2,2:337.579:366.612,131.36:0.0,0.0:0.0,7.4372e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:19,14,0,2:3,19:2,2:213.394:326.675,113.385:0.0,0.0:0.0,8.8998e-06,0.999994
-chr1	8005269	.	TTTATTTATTTA	.	.	.	END=8005280;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:24,30,0,5:3,24:2,5:403.316:366.612,131.36:0.0,0.0:0.0,1.95327e-07,1.0	0/0:36:0.999995:3,3:3-3,3-3:20,16,0,0:3,20:NULL:233.918:326.675,113.385:0.0,0.0:0.0,1.32684e-05,0.999987
-chr1	8005894	.	GTGTGTGTGTGTGT	.	.	.	END=8005907;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.993775:7,7:7-7,7-7:11,10,0,3:7,11:5,1|6,2:160.454:366.612,131.36:0.0,0.0:1.51517e-20,0.00212715,0.997881	0/0:32:0.99969:7,7:7-8,7-8:15,12,0,4:7,15:4,1|6,3:200.321:326.675,113.385:0.270063,0.270063:6.405e-28,0.000103737,0.999896
-chr1	8015093	.	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG,GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG	.	.	END=8015152;RU=ggag;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:31:0.246659:9,15:9-16,12-16:2,24,0,3:15,2:9,2|14,1:252.076:366.612,131.36:2.22065,1.22596:0.000347671,0.806366,0.193342	2/2:9:0.0494967:12,12:8-12,8-12:0,3,0,6:NULL:3,1|6,1|8,1|11,1|12,2:70.3561:326.675,113.385:1.30046,1.30046:0.676946,0.294354,0.028742
-chr1	8015152	.	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	.	.	.	END=8015183;RU=ggaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.993505:8,8:8-10,8-10:12,25,0,0:8,12:NULL:283.844:366.612,131.36:0.817177,0.817177:1.32354e-28,0.00572351,0.994293	0/0:22:0.999814:8,8:8-10,8-10:16,2,0,3:8,16:3,1|7,2:105.387:326.675,113.385:0.797014,0.797014:1.31413e-38,5.16073e-05,0.999949
-chr1	8015590	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8015635;RU=tc;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:17:0.78673:16,17:16-17,16-17:5,7,0,5:16,3|17,2:4,1|6,1|7,1|15,2:131.804:366.612,131.36:0.374147,0.374147:1.0,0.0,0.0	0/3:24:0.654856:23,24:22-23,21-24:11,7,0,5:22,3|23,6|24,2:4,1|5,2|6,1|12,1:164.248:326.675,113.385:0.429525,0.920845:3.63768e-08,0.076716,0.923377
-chr1	8018726	.	CTGCTGCTGCTG	.	.	.	END=8018737;RU=ctg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:255.397:366.612,131.36:0.0,0.0:0.0,6.28587e-07,1.0	0/0:43:1.0:4,4:4-4,4-4:22,21,0,0:4,22:NULL:268.061:326.675,113.385:0.0,0.0:0.0,2.23241e-06,1.0
-chr1	8019993	.	ACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8020020;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:0.999518:11,11:10-11,10-11:30,16,0,5:10,4|11,24|12,2:4,1|5,1|7,2|8,1:325.381:366.612,131.36:0.270063,0.270063:1.0,6.34455e-09,0.0	0/0:47:0.999506:14,14:14-15,14-15:26,15,0,6:13,3|14,21|15,2:4,1|5,1|7,1|9,1|12,2:312.639:326.675,113.385:0.195027,0.195027:3.34035e-27,0.000366867,0.999636
-chr1	8023350	.	TGATGATGATGA	.	.	.	END=8023361;RU=tga;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:232.112:366.612,131.36:0.0,0.0:0.0,4.19874e-08,1.0	0/0:32:0.999993:4,4:4-4,4-4:19,13,0,0:4,19:NULL:194.258:326.675,113.385:0.0,0.0:0.0,1.44639e-05,0.999986
-chr1	8028124	.	ACACACACACACACAC	.	.	.	END=8028139;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.246956:8,8:8-8,8-8:2,0,0,0:8,2:NULL:7.97734:366.612,131.36:0.0,0.0:6.89451e-05,0.374285,0.625703	0/0:47:1.0:8,8:8-8,8-8:28,12,0,7:8,28:5,2|6,1|7,4:281.72:326.675,113.385:0.0,0.0:0.0,1.34757e-08,1.0
-chr1	8035149	.	GTGTGTGTGTGTGT	.	.	.	END=8035162;RU=gt;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:7,7:7-7,7-7:20,15,0,2:7,20:5,2:233.838:366.612,131.36:0.139319,0.139319:5.08562e-39,5.57218e-06,0.999995	0/0:49:1.0:7,7:7-7,7-7:30,17,0,2:7,30:6,2:300.087:326.675,113.385:0.0,0.0:0.0,8.81438e-09,1.0
-chr1	8039355	.	GTGGGTGGGTGG	.	.	.	END=8039366;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:65:1.0:3,3:3-3,3-3:40,25,0,0:3,40:NULL:385.189:366.612,131.36:0.0,0.0:0.0,5.97085e-12,1.0	0/0:66:1.0:3,3:3-3,3-3:51,11,0,4:3,51:2,4:327.464:326.675,113.385:0.0,0.0:0.0,1.1277e-15,1.0
-chr1	8039460	.	ATACATACATACATACATACATAC	ATACATACATACATACATAC	.	.	END=8039483;RU=atac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:5,5:5-5,5-5:30,17,0,7:5,30:2,3|3,1|4,3:325.203:366.612,131.36:0.0,0.0:1.0,3.32293e-09,0.0	0/0:51:1.0:6,6:6-6,6-6:28,15,0,8:6,28:2,2|3,2|4,2|5,2:306.503:326.675,113.385:0.0,0.0:0.0,1.9037e-08,1.0
-chr1	8047704	.	TGGTTGGTTGGT	.	.	.	END=8047715;RU=tggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:355.566:366.612,131.36:0.0,0.0:0.0,2.55212e-08,1.0	0/0:44:1.0:3,3:3-3,3-3:32,12,0,0:3,32:NULL:233.934:326.675,113.385:0.0,0.0:0.0,1.47459e-09,1.0
-chr1	8053368	.	AAATAAATAAAT	.	.	.	END=8053379;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:219.592:366.612,131.36:0.0,0.0:0.0,1.6413e-06,1.0	0/0:20:0.995495:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.957:326.675,113.385:0.0,0.0:2.08069e-37,0.0027254,0.997283
-chr1	8057815	.	TTTATTTATTTA	.	.	.	END=8057826;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999994:3,3:3-3,3-3:19,11,0,0:3,19:NULL:174.251:366.612,131.36:0.0,0.0:0.0,1.34549e-05,0.999987	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:210.317:326.675,113.385:0.0,0.0:0.0,5.71642e-06,0.999995
-chr1	8058525	.	CTACTACTACTA	.	.	.	END=8058536;RU=cta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:24,13,0,0:4,24:NULL:219.275:366.612,131.36:0.0,0.0:0.0,5.10952e-07,1.0	0/0:34:1.0:4,4:4-4,4-4:21,13,0,0:4,21:NULL:202.493:326.675,113.385:0.0,0.0:0.0,6.14543e-06,0.999995
-chr1	8058938	.	TTGGTTGGTTGG	.	.	.	END=8058949;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:33,17,0,2:3,33:2,2:298.514:366.612,131.36:0.0,0.0:0.0,7.62773e-10,1.0	0/0:45:0.999986:3,3:3-3,3-3:19,26,0,0:3,19:NULL:314.665:326.675,113.385:0.0,0.0:0.0,2.32134e-05,0.999979
-chr1	8061760	.	TTTATTTATTTA	.	.	.	END=8061771;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:203.399:366.612,131.36:0.0,0.0:0.0,9.55518e-06,0.999993	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:209.233:326.675,113.385:0.0,0.0:0.0,1.0808e-07,1.0
-chr1	8063311	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8063358;RU=ct;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.366873:24,24:20-29,20-29:7,9,0,2:23,2|24,5:6,1|12,1:140.755:366.612,131.36:3.03436,3.03436:6.45338e-06,0.549389,0.450712	0/1:32:0.942422:24,25:23-24,23-26:13,11,0,6:23,3|24,7|25,3:5,2|10,1|18,2|24,1:231.017:326.675,113.385:0.253975,0.85905:5.17546e-17,0.0127168,0.987312
-chr1	8063359	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA	.	.	END=8063386;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:26:0.975883:14,18:14-19,16-20:10,10,0,3:14,5|18,3|19,2:5,1|6,1|9,1:178.02:366.612,131.36:1.13054,0.860418:2.49471e-18,7.04711e-09,1.0	0/0:33:0.998811:14,14:13-14,13-14:13,12,0,7:14,13:5,1|7,1|10,2|12,2|13,1:226.441:326.675,113.385:0.253975,0.253975:1.41554e-22,0.000607714,0.999394
-chr1	8066722	.	CATGCATGCATG	.	.	.	END=8066733;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:3,3:3-3,3-3:19,9,0,3:3,19:2,3:177.705:366.612,131.36:0.0,0.0:0.0,2.81014e-06,1.0	0/0:22:0.999638:3,3:3-3,3-3:15,7,0,0:3,15:NULL:120.182:326.675,113.385:0.0,0.0:0.0,0.000209397,0.999795
-chr1	8068975	.	ATTCATTCATTC	.	.	.	END=8068986;RU=attc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:27,18,0,0:3,27:NULL:274.872:366.612,131.36:0.0,0.0:0.0,8.47198e-08,1.0	0/0:30:1.0:3,3:3-3,3-3:24,6,0,0:3,24:NULL:146.035:326.675,113.385:0.0,0.0:0.0,2.6369e-07,1.0
-chr1	8075123	.	CTCCCTCCCTCC	.	.	.	END=8075134;RU=ctcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.99998:3,3:3-3,3-3:18,19,0,4:3,18:2,4:270.132:366.612,131.36:0.0,0.0:0.0,1.23562e-05,0.999987	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:248.856:326.675,113.385:0.0,0.0:0.0,1.1653e-07,1.0
-chr1	8083970	.	GTGTGTGTGTGT	.	.	.	END=8083981;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:6,6:6-6,6-6:28,18,0,2:6,28:4,1|5,1:289.967:366.612,131.36:0.139319,0.139319:0.0,2.06437e-08,1.0	0/0:53:1.0:6,6:6-6,6-6:33,20,0,0:6,33:NULL:306.839:326.675,113.385:0.0,0.0:0.0,1.10416e-09,1.0
-chr1	8091175	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8091222;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:23:0.957696:25,26:25-26,25-26:7,9,0,7:25,3|26,4:4,1|6,1|7,1|10,1|11,2|22,1:176.37:366.612,131.36:0.40582,0.236383:1.10855e-12,0.00186889,0.998139	0/0:32:0.641589:24,24:23-24,23-24:13,12,0,7:23,3|24,10:11,1|16,1|17,1|19,3|23,1:225.676:326.675,113.385:0.491073,0.491073:6.05201e-11,0.357067,0.642976
-chr1	8093608	.	AGAAAGAAAGAA	.	.	.	END=8093619;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:27,9,0,0:3,27:NULL:188.384:366.612,131.36:0.0,0.0:0.0,4.88905e-08,1.0	0/0:40:1.0:3,3:3-3,3-3:26,12,0,2:3,26:2,2:220.726:326.675,113.385:0.0,0.0:0.0,6.07462e-08,1.0
-chr1	8095889	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8095942;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:0.99954:15,15:15-15,15-15:26,23,0,14:14,4|15,22:5,1|8,3|9,1|11,1|12,3|13,3|14,1|15,1:440.902:366.612,131.36:0.139319,0.139319:1.0,0.0,0.0	0/2:69:0.276807:27,36:27-27,9-36:14,20,0,33:26,3|27,9|28,2:5,2|6,1|8,1|9,1|11,3|12,2|13,1|14,1|15,2|16,1|17,1|18,1|19,1|20,1|21,4|22,1|24,1|25,2|26,2|27,1|29,1|30,1|34,1:534.626:326.675,113.385:0.0990099,7.57372:7.14644e-35,2.33556e-10,1.0
-chr1	8098070	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=8098089;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999434:4,4:4-4,4-4:14,27,0,4:4,14:2,1|3,3:319.267:366.612,131.36:0.0,0.0:0.0,0.000306516,0.999697	0/0:31:0.999931:4,4:4-4,4-4:17,12,0,2:4,17:3,2:191.621:326.675,113.385:0.0,0.0:0.0,3.87537e-05,0.999963
-chr1	8099157	.	ATATATATATATATATATATATATATATAT	AT,ATAT	.	.	END=8099186;RU=at;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:8:0.00773839:1,2:1-7,1-7:0,8,0,0:NULL:NULL:69.9445:366.612,131.36:2.05187,2.03604:0.389323,0.503565,0.107215	0/0:14:0.884329:15,15:13-18,13-18:8,2,0,0:15,8:NULL:53.528:326.675,113.385:1.0936,1.0936:4.83461e-07,0.0599293,0.940159
-chr1	8099251	.	TTTGTTTGTTTGTTTG	.	.	.	END=8099266;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:1.0:4,4:4-4,4-4:20,7,0,0:4,20:NULL:140.623:366.612,131.36:0.0,0.0:0.0,6.8825e-06,0.999994	0/0:18:0.999251:4,4:4-4,4-4:14,4,0,0:4,14:NULL:88.6924:326.675,113.385:0.0,0.0:1e-45,0.000424862,0.999576
-chr1	8104863	.	AGGAAGGAAGGA	.	.	.	END=8104874;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.99993:3,3:3-3,3-3:17,17,0,2:3,17:2,2:242.556:366.612,131.36:0.0,0.0:0.0,3.98932e-05,0.999963	0/0:52:1.0:3,3:3-3,3-3:23,27,0,2:3,23:2,2:352.532:326.675,113.385:0.0,0.0:0.0,5.92066e-07,1.0
-chr1	8108241	.	TCTTCTTCTTCT	.	.	.	END=8108252;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:4,4:4-4,4-4:32,17,0,0:4,32:NULL:287.673:366.612,131.36:0.0,0.0:0.0,3.52764e-09,1.0	0/0:33:0.999976:4,4:4-4,4-4:19,14,0,0:4,19:NULL:206.848:326.675,113.385:0.0,0.0:0.0,3.39215e-05,0.99997
-chr1	8108409	.	TCTTTCTTTCTT	.	.	.	END=8108420;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:35,21,0,3:3,35:2,3:354.824:366.612,131.36:0.0,0.0:0.0,9.24194e-11,1.0	0/0:46:1.0:3,3:3-3,3-3:35,11,0,0:3,35:NULL:237.13:326.675,113.385:0.0,0.0:0.0,2.04546e-10,1.0
-chr1	8109627	.	ATATATATATATAT	.	.	.	END=8109640;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999854:7,7:7-7,7-7:17,16,0,0:7,17:NULL:222.961:366.612,131.36:0.0,0.0:6.85001e-22,9.72556e-05,0.999903	0/0:30:1.0:7,7:7-7,7-7:20,6,0,2:7,20:4,2:150.079:326.675,113.385:0.0,0.0:7.87813e-26,1.11203e-05,0.999993
-chr1	8111389	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8111422;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:52:0.92424:20,21:20-20,20-21:19,12,0,20:19,3|20,16:5,1|6,2|7,2|8,1|9,3|11,1|12,2|13,2|15,1|16,1|17,2|21,2:374.466:366.612,131.36:0.0,0.298675:0.0,2.51775e-16,1.0	1/0:43:0.771566:13,17:13-17,17-17:15,13,0,15:13,2|16,3|17,10:6,2|8,2|9,2|10,2|11,2|12,3|16,2:324.918:326.675,113.385:1.82038,0.0:4.76351e-10,0.91326,0.0868381
-chr1	8113654	.	TATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=8113685;RU=tatt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.880564:10,10:10-10,10-10:6,11,0,10:10,6:2,1|3,2|5,3|6,2|8,2:199.947:366.612,131.36:0.0,0.0:1.30764e-35,0.0149906,0.985039	0/0:41:0.999572:8,8:7-8,7-8:14,18,0,8:8,14:3,1|4,1|5,2|7,3|8,1:281.979:326.675,113.385:0.345543,0.345543:0.0,0.000167456,0.999834
-chr1	8114127	.	TTGTTTGTTTGT	.	.	.	END=8114138;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:26,17,0,4:3,26:2,4:286.37:366.612,131.36:0.0,0.0:0.0,4.42697e-08,1.0	0/0:30:0.999927:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.804:326.675,113.385:0.0,0.0:0.0,5.3239e-05,0.999948
-chr1	8114704	.	TTAATTAATTAATTAA	.	.	.	END=8114719;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.99981:4,4:4-4,4-4:16,23,0,0:4,16:NULL:277.303:366.612,131.36:0.0,0.0:0.0,0.000160105,0.999842	0/0:26:0.999136:4,4:4-4,4-4:14,12,0,0:4,14:NULL:164.933:326.675,113.385:0.0,0.0:1.562e-42,0.000666524,0.999339
-chr1	8115132	.	AAATAAATAAAT	.	.	.	END=8115143;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999857:3,3:3-3,3-3:17,11,0,0:3,17:NULL:175.865:366.612,131.36:0.0,0.0:0.0,0.000104486,0.999896	0/0:33:1.0:3,3:3-3,3-3:24,9,0,0:3,24:NULL:173.987:326.675,113.385:0.0,0.0:0.0,2.60132e-07,1.0
-chr1	8115975	.	AGAAAGAAAGAA	.	.	.	END=8115986;RU=agaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999882:3,3:3-3,3-3:16,14,0,0:3,16:NULL:201.072:366.612,131.36:0.0,0.0:0.0,8.62163e-05,0.999917	0/0:34:1.0:3,3:3-3,3-3:22,12,0,0:3,22:NULL:198.796:326.675,113.385:0.0,0.0:0.0,1.41773e-06,1.0
-chr1	8116438	.	GTTGTTGTTGTTGTT	.	.	.	END=8116452;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999999:5,5:5-5,5-5:18,13,0,3:5,18:4,2|5,1:213.382:366.612,131.36:0.0,0.0:0.0,7.17428e-06,0.999994	0/0:23:0.986297:5,5:5-5,5-5:10,13,0,0:5,10:NULL:158.594:326.675,113.385:0.0,0.0:1.25291e-30,0.00974018,0.990283
-chr1	8119064	.	TTTGTTTGTTTG	.	.	.	END=8119075;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,15,0,0:3,22:NULL:227.549:366.612,131.36:0.0,0.0:0.0,2.36075e-06,1.0	0/0:39:1.0:3,3:3-3,3-3:29,10,0,0:3,29:NULL:209.031:326.675,113.385:0.0,0.0:0.0,9.50918e-09,1.0
-chr1	8122477	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8122534;RU=ga;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:66:0.963354:19,19:19-20,19-20:18,28,0,19:18,2|19,14|20,2:5,2|7,3|8,1|13,2|14,4|15,1|16,1|17,2|18,3:500.719:366.612,131.36:0.369666,0.369666:1.0,0.0,0.0	0/0:48:0.327823:29,29:27-30,27-30:3,22,0,20:29,3:4,1|5,3|7,2|8,1|10,1|13,1|14,1|15,2|16,1|18,1|19,1|20,3|25,1|27,1:374.998:326.675,113.385:1.16277,1.16277:9.19554e-05,0.424578,0.575422
-chr1	8122771	.	ATCTATCTATCT	.	.	.	END=8122782;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:3,3:3-3,3-3:30,24,0,3:3,30:2,3:360.085:366.612,131.36:0.0,0.0:0.0,4.51023e-09,1.0	0/0:38:1.0:3,3:3-3,3-3:23,13,0,2:3,23:2,2:225.757:326.675,113.385:0.0,0.0:0.0,4.68736e-07,1.0
-chr1	8130079	.	ATCTATCTATCT	.	.	.	END=8130090;RU=atct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:20,17,0,3:3,20:2,3:256.317:366.612,131.36:0.0,0.0:0.0,2.22684e-06,1.0	0/0:52:1.0:3,3:3-3,3-3:30,20,0,2:3,30:2,2:316.916:326.675,113.385:0.0,0.0:0.0,2.97695e-09,1.0
-chr1	8130171	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8130210;RU=ag;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999032:15,15:15-15,15-15:16,8,0,4:15,16:12,2|13,1|15,1:175.304:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:33:0.891619:20,20:18-20,18-20:10,15,0,7:19,2|20,8:6,1|8,1|11,3|12,1|19,1:251.968:326.675,113.385:0.62211,0.62211:3.15234e-10,0.0847739,0.915325
-chr1	8132817	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8132848;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.346622:22,22:20-22,20-22:6,19,0,16:21,2|22,4:4,1|5,1|6,1|7,1|8,3|10,1|11,1|12,2|15,1|17,2|21,2:336.438:366.612,131.36:0.623841,0.623841:0.0,0.0,1.0	0/0:28:0.958789:16,16:15-16,15-16:14,11,0,3:15,3|16,11:11,1|12,1|13,1:192.157:326.675,113.385:0.21692,0.21692:1.2706e-12,0.0390885,0.960981
-chr1	8135933	.	TATTTTATTTTATTT	.	.	.	END=8135947;RU=tattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999845:3,3:3-3,3-3:16,14,0,0:3,16:NULL:187.842:366.612,131.36:0.0,0.0:0.0,8.98638e-05,0.999911	0/0:17:0.95758:3,3:3-3,3-3:8,9,0,0:3,8:NULL:112.795:326.675,113.385:0.0,0.0:1.3255e-26,0.025304,0.974748
-chr1	8136804	.	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTT	.	.	END=8136863;RU=ttgtt;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.0353704:19,19:12-19,12-19:0,17,0,20:NULL:3,2|4,4|5,1|7,2|8,1|10,3|11,2|13,1|14,1|18,3:295.425:366.612,131.36:1.8477,1.8477:0.0,0.0,1.0	0/0:47:0.999732:12,12:12-12,12-12:15,18,0,14:12,15:3,1|4,4|7,2|8,3|9,1|11,3:335.976:326.675,113.385:0.0,0.0:3e-45,0.000192081,0.999811
-chr1	8138672	.	AGCAGCAGCAGC	.	.	.	END=8138683;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:1.0:4,4:4-4,4-4:34,37,0,3:4,34:3,3:490.06:366.612,131.36:0.0,0.0:0.0,4.72644e-10,1.0	0/0:44:1.0:4,4:4-4,4-4:36,8,0,0:4,36:NULL:220.562:326.675,113.385:0.0,0.0:0.0,1.65479e-10,1.0
-chr1	8149815	.	TATATATATATATATATATATATATATATATATATATATATATATA	TATATATATATATATA	.	.	END=8149860;RU=ta;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.759141:8,8:7-8,7-8:6,9,0,0:8,6:NULL:105.876:366.612,131.36:0.253975,0.253975:1.0,0.0,0.0	0/0:10:0.200773:23,23:22-24,22-24:2,4,0,2:23,2:6,1|12,1:61.958:326.675,113.385:0.828495,0.828495:0.00693742,0.433048,0.560128
-chr1	8152098	.	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	TTTATTTA	.	.	END=8152145;RU=ttta;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.6329:2,2:2-2,2-2:3,9,0,0:2,3:NULL:88.3409:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:27:0.98957:12,12:12-12,12-12:10,8,0,9:12,10:4,1|5,1|6,1|7,1|8,2|10,1|11,2:181.088:326.675,113.385:0.0,0.0:2.07029e-22,0.00534625,0.994669
-chr1	8163528	.	GAGAGGAGAGGAGAG	.	.	.	END=8163542;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999637:3,3:3-3,3-3:15,24,0,0:3,15:NULL:276.149:366.612,131.36:0.0,0.0:1.4e-44,0.000315992,0.999689	0/0:19:0.982968:3,3:3-3,3-3:9,10,0,0:3,9:NULL:130.81:326.675,113.385:0.0,0.0:3.91995e-27,0.0109445,0.989081
-chr1	8167006	.	AATTTAATTTAATTT	.	.	.	END=8167020;RU=aattt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:26,17,0,3:3,26:2,3:278.626:366.612,131.36:0.0,0.0:0.0,7.90845e-08,1.0	0/0:33:1.0:3,3:3-3,3-3:26,7,0,0:3,26:NULL:170.283:326.675,113.385:0.0,0.0:0.0,9.03986e-08,1.0
-chr1	8167756	.	ATATATATATATAT	ATATATATATATATAT	.	.	END=8167769;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999899:7,7:7-7,7-7:17,12,0,0:7,17:NULL:188.649:366.612,131.36:0.0,0.0:2.91558e-24,5.57885e-05,0.999948	0/1:14:0.748426:7,8:7-7,7-8:9,5,0,0:7,7|8,2:NULL:86.5737:326.675,113.385:0.0,0.498798:2.74331e-13,0.00406086,0.995952
-chr1	8169940	.	AAATAAATAAATAAATAAAT	AAATAAATAAATAAATAAATAAAT	.	.	END=8169959;RU=aaat;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:1.0:6,6:6-6,6-6:20,26,0,8:6,20:2,2|3,2|4,3|5,1:374.098:366.612,131.36:0.0,0.0:0.0,2.79208e-06,1.0	0/0:39:1.0:5,5:5-5,5-5:25,10,0,4:5,25:3,2|4,2:223.984:326.675,113.385:0.0,0.0:0.0,1.14854e-07,1.0
-chr1	8172972	.	CTTTCTTTCTTT	.	.	.	END=8172983;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.999871:3,3:3-3,3-3:16,9,0,0:3,16:NULL:140.907:366.612,131.36:0.0,0.0:0.0,7.42312e-05,0.999926	0/0:28:0.999983:3,3:3-3,3-3:18,10,0,0:3,18:NULL:162.497:326.675,113.385:0.0,0.0:0.0,2.2279e-05,0.999979
-chr1	8173983	.	ATAAATAAATAA	.	.	.	END=8173994;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:20,9,0,2:3,20:2,2:177.08:366.612,131.36:0.0,0.0:0.0,4.86084e-06,0.999995	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.598:326.675,113.385:0.0,0.0:0.0,5.37023e-06,0.999995
-chr1	8174320	.	AGGAAGGAAGGA	.	.	.	END=8174331;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999648:3,3:3-3,3-3:15,12,0,0:3,15:NULL:172.893:366.612,131.36:0.0,0.0:0.0,0.000194825,0.999805	0/0:38:1.0:3,3:2-3,2-3:26,9,0,2:3,26:2,2:199.81:326.675,113.385:0.253975,0.253975:0.0,4.32072e-08,1.0
-chr1	8177036	.	AGGGAGGGAGGG	.	.	.	END=8177047;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999978:3,3:3-3,3-3:18,21,0,0:3,18:NULL:260.815:366.612,131.36:0.0,0.0:0.0,2.8336e-05,0.999972	0/0:22:0.997989:3,3:3-3,3-3:12,10,0,0:3,12:NULL:134.192:326.675,113.385:0.0,0.0:6.5965e-41,0.000969514,0.999035
-chr1	8179090	.	ACACACACACAC	ACACACACACACACAC	.	.	END=8179101;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.999393:8,8:8-9,8-9:14,13,0,2:8,14:7,1|8,1:193.538:366.612,131.36:0.311527,0.311527:0.0,9.19338e-05,0.99991	0/0:40:1.0:6,6:6-14,6-14:29,8,0,2:6,29:5,1|6,1:207.577:326.675,113.385:3.72193,3.72193:0.0,5.69252e-09,1.0
-chr1	8183007	.	AAAGAAAGAAAG	.	.	.	END=8183018;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999844:3,3:3-3,3-3:16,12,0,0:3,16:NULL:172.479:366.612,131.36:0.0,0.0:0.0,7.54248e-05,0.999926	0/0:19:0.99913:3,3:3-3,3-3:13,6,0,0:3,13:NULL:108.628:326.675,113.385:0.0,0.0:3.9e-44,0.000489509,0.999514
-chr1	8186005	.	GAGAGAGAGAGAGAGAGAGAGAGA	GA	.	.	END=8186028;RU=ga;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0280876:1,1:1-6,1-6:0,20,0,0:NULL:NULL:187.222:366.612,131.36:1.59716,1.59716:0.784559,0.206896,0.00860633	0/0:44:0.962329:12,12:12-14,12-14:17,21,0,5:11,2|12,13|13,2:5,1|6,1|9,3:321.879:326.675,113.385:0.681228,0.681228:4.07662e-16,0.00669391,0.993323
-chr1	8198691	.	AAACAAACAAAC	.	.	.	END=8198702;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:25,27,0,0:3,25:NULL:345.572:366.612,131.36:0.0,0.0:0.0,1.38727e-07,1.0	0/0:61:1.0:3,3:3-3,3-3:38,21,0,2:3,38:2,2:357.131:326.675,113.385:0.0,0.0:0.0,1.73423e-11,1.0
-chr1	8204150	.	AAACAAACAAACAAACAAACAAAC	.	.	.	END=8204173;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.911458:6,6:5-6,5-6:7,17,0,3:6,7:3,1|4,2:210.269:366.612,131.36:0.499387,0.499387:1.76364e-24,0.0691695,0.930922	0/0:31:0.999832:6,6:6-6,6-6:16,10,0,5:6,16:3,1|4,4:192.651:326.675,113.385:0.0,0.0:0.0,0.000111831,0.999888
-chr1	8206337	.	CCACCACCACCA	.	.	.	END=8206348;RU=cca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999348:4,4:4-4,4-4:14,9,0,0:4,14:NULL:132.349:366.612,131.36:0.0,0.0:1.551e-42,0.000394259,0.999606	0/0:32:1.00001:4,4:4-4,4-4:22,10,0,0:4,22:NULL:178.452:326.675,113.385:0.0,0.0:0.0,1.7583e-06,1.0
-chr1	8223406	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8223453;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.864123:18,18:18-18,18-18:7,5,0,0:18,7:NULL:77.959:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:36:0.985847:24,24:24-25,24-25:11,11,0,12:24,11:4,1|5,1|6,4|11,1|14,1|17,1|18,1|21,1|23,1:244.728:326.675,113.385:0.195027,0.195027:3.05043e-12,0.00493001,0.995084
-chr1	8225347	.	TCCCTCCCTCCC	.	.	.	END=8225358;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.999401:3,3:3-3,3-3:14,29,0,0:3,14:NULL:311.694:366.612,131.36:0.0,0.0:0.0,0.000475557,0.999529	0/0:43:1.0:3,3:3-3,3-3:30,13,0,0:3,30:NULL:233.175:326.675,113.385:0.0,0.0:0.0,4.43822e-09,1.0
-chr1	8227632	.	TCCTTCCTTCCT	TCCT	.	.	END=8227643;RU=tcct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:43:1.0:3,3:3-3,3-3:30,11,0,2:3,30:2,2:240.348:326.675,113.385:0.0,0.0:0.0,3.05243e-09,1.0
-chr1	8229590	.	TAATAATAATAA	.	.	.	END=8229601;RU=taa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999907:4,4:4-4,4-4:18,24,0,0:4,18:NULL:291.457:366.612,131.36:0.0,0.0:0.0,7.27538e-05,0.999927	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:165.956:326.675,113.385:0.0,0.0:0.0,1.92415e-06,1.0
-chr1	8234581	.	CTCTCTCTCTCTCT	CT	.	.	END=8234594;RU=ct;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:39:0.999659:7,7:6-7,6-7:24,11,0,3:6,2|7,22:5,2|6,1:229.004:326.675,113.385:0.294378,0.294378:1e-45,0.000343236,0.999659
-chr1	8242991	.	TTGTTGTTGTTGTTG	TTG	.	.	END=8243005;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:31:0.999806:5,5:5-5,5-5:15,13,0,3:5,15:4,3:199.113:326.675,113.385:0.0,0.0:1.78e-43,0.000116566,0.999887
-chr1	8246899	.	AAGCAAGCAAGCAAGC	.	.	.	END=8246914;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999315:4,4:4-4,4-4:14,9,0,0:4,14:NULL:145.545:366.612,131.36:0.0,0.0:0.0,0.000468451,0.999537	0/0:48:1.0:4,4:4-4,4-4:30,15,0,3:4,30:2,1|3,2:274.711:326.675,113.385:0.0,0.0:0.0,5.01533e-09,1.0
-chr1	8246965	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	END=8247014;RU=aagaa;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.7408:8,8:8-8,8-8:5,2,0,0:8,5:NULL:39.8858:366.612,131.36:0.0,0.0:0.922423,0.0776716,9.9957e-14	0/0:40:0.898434:10,10:7-10,7-10:6,16,0,17:10,6:3,1|4,2|5,3|6,2|7,2|8,5|9,2:289.122:326.675,113.385:1.44541,1.44541:3.21687e-14,0.052063,0.948018
-chr1	8266031	.	GTGGTGGTGGTG	.	.	.	END=8266042;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:24,11,0,0:4,24:NULL:196.125:366.612,131.36:0.0,0.0:0.0,6.85821e-07,1.0	0/0:23:0.997056:4,4:4-4,4-4:12,11,0,0:4,12:NULL:151.09:326.675,113.385:0.0,0.0:2.38039e-40,0.00193777,0.99807
-chr1	8266249	.	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	CAAAA	.	.	END=8266303;RU=caaaa;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0719045:1,1:1-2,1-2:0,14,0,0:NULL:NULL:126.948:366.612,131.36:0.253975,0.253975:0.901064,0.0980899,0.000948109	0/0:32:0.985697:11,11:11-11,11-11:11,13,0,8:11,11:3,1|4,2|5,2|6,2|8,1:230.731:326.675,113.385:0.0,0.0:4.34179e-34,0.0130186,0.987009
-chr1	8266615	.	ACACACACACACACACACACACACACACACACACACACAC	ACAC,ACACAC,ACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8266654;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:12:0.0212688:2,3:1-3,1-4:0,12,0,0:NULL:NULL:107.779:366.612,131.36:0.622425,0.8247:0.721107,0.265612,0.0133016	0/3:37:0.629295:20,21:19-20,19-21:16,11,0,10:19,4|20,9|21,3:4,1|7,2|11,1|13,1|14,1|15,1|16,1|19,2:266.552:326.675,113.385:0.253975,0.783868:6.61717e-12,0.131809,0.868288
-chr1	8277000	.	ACCCACCCACCC	.	.	.	END=8277011;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:2:0.285533:3,3:3-3,3-3:2,0,0,0:3,2:NULL:7.81672:366.612,131.36:0.0,0.0:1.6909e-06,0.28606,0.713946	0/0:23:0.932852:3,3:3-3,3-3:7,16,0,0:3,7:NULL:175.271:326.675,113.385:0.0,0.0:2.30008e-19,0.0474448,0.952631
-chr1	8279683	.	CTCTCTCTCTCT	CTCTCTCTCTCTCT	.	.	END=8279694;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999973:7,7:7-8,7-8:18,17,0,2:7,18:5,1|6,1:241.681:366.612,131.36:0.309,0.309:0.0,1.18429e-05,0.999987	0/0:46:1.0:6,6:6-6,6-6:31,15,0,0:6,31:NULL:262.196:326.675,113.385:0.0,0.0:0.0,5.96934e-09,1.0
-chr1	8279713	.	TCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTCTCCTC	TCCTC	.	.	END=8279762;RU=tcctc;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0751248:1,1:1-2,1-2:0,15,0,0:NULL:NULL:131.48:366.612,131.36:0.195027,0.195027:0.893997,0.104919,0.00118645	0/0:48:0.892845:10,10:3-10,3-10:8,20,0,18:10,8:2,4|3,3|4,3|5,1|6,4|7,2|8,1:347.23:326.675,113.385:2.778,2.778:1.45748e-16,0.0949286,0.905171
-chr1	8280732	.	CACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=8280753;RU=ca;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.287648:25,25:23-26,23-26:2,13,0,18:25,2:6,1|7,2|9,2|10,2|13,2|14,1|15,2|16,1|20,1|21,1|23,2|24,1:272.998:366.612,131.36:1.32466,1.32466:0.0,0.0,1.0	0/0:32:0.929785:11,11:11-12,11-12:21,6,0,4:11,18|12,3:5,2|6,1|10,1:187.392:326.675,113.385:0.398507,0.398507:3.70661e-29,5.56129e-06,0.999995
-chr1	8282353	.	GGGTGGGTGGGT	.	.	.	END=8282364;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.468139:3,3:1-3,1-3:3,16,0,0:3,3:NULL:153.316:366.612,131.36:0.442786,0.442786:3.80222e-09,0.316452,0.683557	0/0:27:0.987199:3,3:3-3,3-3:10,17,0,0:3,10:NULL:188.791:326.675,113.385:0.0,0.0:2.35018e-28,0.00808223,0.991936
-chr1	8290480	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=8290543;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.996497:14,14:6-14,6-14:12,18,0,17:14,12:3,1|5,1|6,2|8,2|9,4|10,3|11,1|12,3:344.02:366.612,131.36:3.27122,3.27122:0.999507,0.000495853,6.86637e-24	0/0:45:0.997484:16,16:16-16,16-16:12,15,0,18:16,12:3,2|5,1|6,2|8,3|9,2|10,3|13,1|15,3|16,1:324.595:326.675,113.385:0.0,0.0:1.61841e-34,0.000532592,0.999469
-chr1	8290943	.	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	.	.	END=8291032;RU=tct;PERIOD=3;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.0418623:28,28:18-28,18-28:0,6,0,12:NULL:7,1|9,1|11,1|16,2|17,1|18,1|22,2|23,1|27,2:147.29:366.612,131.36:3.92719,3.92719:0.730439,0.253303,0.0162825	0/0:31:0.280789:30,30:26-30,26-30:3,9,0,17:30,3:5,2|6,1|8,1|9,3|12,1|14,2|16,1|19,1|20,1|21,1|23,2|28,1:227.676:326.675,113.385:1.32066,1.32066:5.78395e-06,0.449715,0.550385
-chr1	8293500	.	TGGTGGTGGTGG	.	.	.	END=8293511;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:48:1.0:4,4:4-4,4-4:27,21,0,0:4,27:NULL:299.948:366.612,131.36:0.0,0.0:0.0,9.36759e-08,1.0	0/0:32:0.999984:4,4:4-4,4-4:19,13,0,0:4,19:NULL:192.347:326.675,113.385:0.0,0.0:0.0,2.57329e-05,0.999978
-chr1	8295438	.	CTGCCTGCCTGC	.	.	.	END=8295449;RU=ctgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:26,22,0,3:3,26:2,3:329.686:366.612,131.36:0.0,0.0:0.0,5.76648e-08,1.0	0/0:20:0.997312:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.932:326.675,113.385:0.0,0.0:2.08556e-37,0.00150062,0.998504
-chr1	8296427	.	GGTAGGTAGGTA	.	.	.	END=8296438;RU=ggta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:20,13,0,0:3,20:NULL:194.976:366.612,131.36:0.0,0.0:0.0,5.29213e-06,0.999995	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:170.415:326.675,113.385:0.0,0.0:0.0,1.54454e-07,1.0
-chr1	8303139	.	ACCACCACCACCACCACC	.	.	.	END=8303156;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999833:6,6:6-6,6-6:16,11,0,0:6,16:NULL:168.394:366.612,131.36:0.0,0.0:0.0,0.000115779,0.999887	0/0:26:0.999411:6,6:4-6,4-6:14,7,0,4:6,14:4,3|5,1:145.61:326.675,113.385:0.851255,0.851255:3.77311e-40,0.000251334,0.99975
-chr1	8303362	.	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	.	.	END=8303409;RU=ataa;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.999021:11,11:11-11,11-11:13,14,0,10:11,13:2,1|3,1|4,2|7,1|8,1|9,1|10,3:254.298:366.612,131.36:0.0,0.0:0.999378,0.000625603,1.9791e-22	0/0:24:0.571462:12,12:11-14,11-14:4,9,0,8:12,4:3,1|6,1|7,1|8,3|9,1|11,1:157.02:326.675,113.385:1.11535,1.11535:6.3577e-09,0.241148,0.758872
-chr1	8303901	.	AACAACAACAACAAC	AACAACAACAACAACAAC	.	.	END=8303915;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:1.0:5,6:5-5,6-6:23,13,0,0:5,16|6,7:NULL:229.551:366.612,131.36:0.0,0.172061:0.0,1.36785e-17,1.0	0/0:24:0.997124:5,5:5-5,5-5:12,10,0,2:5,12:4,2:160.303:326.675,113.385:0.0,0.0:7.74398e-31,0.00124512,0.998761
-chr1	8314805	.	AATAAAATAAAATAA	.	.	.	END=8314819;RU=aataa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:23,17,0,0:3,23:NULL:246.085:366.612,131.36:0.0,0.0:0.0,4.89499e-07,1.0	0/0:26:1.0:3,3:3-3,3-3:19,7,0,0:3,19:NULL:138.841:326.675,113.385:0.0,0.0:0.0,1.05149e-05,0.999993
-chr1	8314957	.	CACAACACAACACAA	.	.	.	END=8314971;RU=cacaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:235.946:366.612,131.36:0.0,0.0:0.0,2.10711e-06,1.0	0/0:29:0.999999:3,3:3-3,3-3:18,9,0,2:3,18:2,1|3,1:165.01:326.675,113.385:0.0,0.0:0.0,7.22613e-06,0.999994
-chr1	8316961	.	TATATATATATATA	TATATATATA	.	.	END=8316974;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:1.00001:5,5:5-5,5-5:22,16,0,0:5,22:NULL:231.619:366.612,131.36:0.0,0.0:1.0,6.09319e-07,0.0	0/0:21:0.999463:7,7:7-8,7-8:15,5,0,0:7,15:NULL:108.023:326.675,113.385:0.195027,0.195027:4.76262e-23,0.000320093,0.999682
-chr1	8321168	.	TTTGTTTGTTTG	.	.	.	END=8321179;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.999991:3,3:3-3,3-3:18,23,0,4:3,18:2,4:300.988:366.612,131.36:0.0,0.0:0.0,1.71594e-05,0.999986	0/0:26:0.93009:3,3:3-3,3-3:6,15,0,5:3,6:2,5:193.937:326.675,113.385:0.0,0.0:1.02792e-20,0.0346144,0.965449
-chr1	8322155	.	CAACAACAACAACAA	CAACAACAACAA	.	.	END=8322169;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.999751:4,4:4-4,4-4:16,7,0,0:4,16:NULL:128.369:366.612,131.36:0.0,0.0:0.999888,0.000111333,1.484e-42	0/0:33:1.0:5,5:5-5,5-5:24,7,0,2:5,24:3,1|4,1:173.71:326.675,113.385:0.0,0.0:0.0,2.6353e-07,1.0
-chr1	8322582	.	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	TCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGT	.	.	END=8322666;RU=tctgt;PERIOD=5;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.331779:13,13:10-13,10-13:3,13,0,0:13,3:NULL:137.248:366.612,131.36:1.20206,1.20206:1.0,0.0,0.0	0/0:48:0.889489:17,17:17-17,17-17:6,23,0,19:17,6:2,1|3,1|5,1|6,2|7,3|9,1|10,1|11,1|12,3|13,1|15,1|16,2|17,1:381.173:326.675,113.385:0.278639,0.278639:2.99727e-17,0.0723204,0.927774
-chr1	8325886	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=8325921;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:1.0:8,8:8-8,8-8:26,19,0,7:8,26:2,1|3,1|5,1|6,2|7,2:332.825:366.612,131.36:0.0,0.0:1.0,1.00529e-07,3e-45	0/0:31:0.985159:9,9:8-9,8-9:9,13,0,8:9,9:2,1|4,1|6,1|7,4|8,1:214.639:326.675,113.385:0.45695,0.45695:5.96041e-20,0.00861212,0.991405
-chr1	8328000	.	CAACAACAACAA	.	.	.	END=8328011;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:24,14,0,0:4,24:NULL:225.419:366.612,131.36:0.0,0.0:0.0,4.10969e-07,1.0	0/0:35:1.0:4,4:4-4,4-4:20,15,0,0:4,20:NULL:214.427:326.675,113.385:0.0,0.0:0.0,7.2502e-06,0.999994
-chr1	8329731	.	ATAAATAAATAA	.	.	.	END=8329742;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:35,24,0,0:3,35:NULL:359.0:366.612,131.36:0.0,0.0:0.0,2.54448e-10,1.0	0/0:44:1.0:3,3:3-3,3-3:30,14,0,0:3,30:NULL:246.505:326.675,113.385:0.0,0.0:0.0,5.56693e-09,1.0
-chr1	8330089	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8330126;RU=ag;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.835824:20,20:20-20,20-20:6,7,0,3:20,6:7,1|12,1|19,1:115.104:366.612,131.36:0.0,0.0:2.33946e-18,0.027077,0.972978	0/0:30:0.705345:19,19:19-20,19-20:12,12,0,6:19,10|20,2:4,1|8,1|9,1|11,1|13,1|16,1:216.776:326.675,113.385:0.452422,0.452422:1.00315e-13,0.00259924,0.997406
-chr1	8331327	.	TGTCTGTCTGTC	.	.	.	END=8331338;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:3,3:3-3,3-3:23,24,0,2:3,23:2,2:322.453:366.612,131.36:0.0,0.0:0.0,6.30554e-07,1.0	0/0:38:1.00001:3,3:3-3,3-3:21,13,0,4:3,21:2,4:233.26:326.675,113.385:0.0,0.0:0.0,1.12939e-06,1.0
-chr1	8332124	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8332161;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:44:0.725266:25,26:24-27,25-27:4,20,0,18:25,2|26,2:5,1|7,1|8,1|9,1|10,1|14,1|15,2|18,2|19,1|20,2|23,2|24,1|25,2:345.674:366.612,131.36:0.986131,0.685675:0.0,0.0,1.0	0/1:52:0.317539:19,24:19-19,19-25:16,20,0,16:18,2|19,14:4,1|6,2|8,1|9,1|11,2|12,1|14,3|15,1|17,1|18,1|19,1|24,1:396.996:326.675,113.385:0.0,2.71258:4.67477e-25,7.44892e-06,0.999994
-chr1	8333431	.	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGT	.	.	END=8333470;RU=tttgt;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:58:0.999958:7,7:7-7,7-7:17,27,0,14:7,17:2,1|3,5|4,2|5,1|6,5:417.359:366.612,131.36:0.0,0.0:0.999986,1.70365e-05,4.73916e-37	0/0:42:0.999865:8,8:8-9,8-9:16,15,0,10:8,16:3,2|4,3|6,2|7,3:282.05:326.675,113.385:0.382696,0.382696:0.0,7.31916e-05,0.999926
-chr1	8334958	.	TTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=8334981;RU=tttg;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:1.0:5,5:5-5,5-5:25,14,0,5:5,25:3,4|4,1:264.435:366.612,131.36:0.0,0.0:1.0,2.64791e-07,0.0	0/0:34:0.571229:6,6:5-6,5-6:20,6,0,8:5,3|6,17:3,2|4,2|5,4:204.081:326.675,113.385:0.469019,0.469019:1.44932e-37,0.428869,0.571225
-chr1	8338614	.	ATAAATAAATAAATAAATAA	ATAAATAAATAAATAA	.	.	END=8338633;RU=ataa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:1.00001:4,4:4-4,4-4:21,15,0,3:4,21:2,2|3,1:246.6:366.612,131.36:0.0,0.0:1.0,2.3266e-06,0.0	0/0:32:1.00001:5,5:5-5,5-5:21,7,0,4:5,21:2,1|3,2|4,1:178.83:326.675,113.385:0.0,0.0:0.0,2.26863e-06,1.0
-chr1	8338698	.	AATAATAATAAT	.	.	.	END=8338709;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:31,5,0,0:4,31:NULL:170.937:366.612,131.36:0.0,0.0:0.0,3.20903e-09,1.0	0/0:24:0.999899:4,4:4-4,4-4:17,7,0,0:4,17:NULL:129.851:326.675,113.385:0.0,0.0:0.0,7.15077e-05,0.999932
-chr1	8339191	.	CTGTGCTGTGCTGTG	.	.	.	END=8339205;RU=ctgtg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:36,21,0,2:3,36:2,2:353.993:366.612,131.36:0.0,0.0:0.0,4.50307e-11,1.0	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:160.963:326.675,113.385:0.0,0.0:0.0,6.85317e-06,0.999994
-chr1	8339827	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8339862;RU=ag;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.841567:13,13:11-13,11-13:6,3,0,4:13,6:4,1|10,1|11,1|12,1:87.0629:366.612,131.36:0.739465,0.739465:1.0,0.0,0.0	0/0:28:0.980216:18,18:14-19,14-19:10,6,0,8:18,10:6,2|7,1|9,2|12,2|17,1:159.194:326.675,113.385:1.50632,1.50632:4.74857e-16,0.00819059,0.99183
-chr1	8339980	.	ATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8340019;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:9:0.168409:22,22:19-22,19-22:2,6,0,0:22,2:NULL:68.9241:366.612,131.36:0.724736,0.724736:9.0371e-05,0.253796,0.746121	1/0:13:0.601332:19,20:19-21,20-21:5,5,0,2:19,2|20,3:4,1|11,1:85.3542:326.675,113.385:0.753387,0.40582:0.0111203,0.695401,0.293511
-chr1	8345278	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=8345305;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.99932:10,10:10-10,10-10:14,18,0,7:10,14:3,2|5,1|6,1|7,2|8,1:276.122:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:42:1.0:7,7:6-7,6-7:23,10,0,6:7,23:4,1|5,1|6,4:239.707:326.675,113.385:0.29703,0.29703:0.0,4.11408e-07,1.0
-chr1	8353434	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=8353449;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.997514:5,5:5-5,5-5:12,10,0,0:5,12:NULL:140.318:366.612,131.36:0.0,0.0:0.0,0.00119794,0.998807	0/0:26:0.999895:4,4:4-4,4-4:17,9,0,0:4,17:NULL:151.271:326.675,113.385:0.0,0.0:9.70261e-38,8.64309e-05,0.999917
-chr1	8354049	.	AAGCAAGCAAGC	.	.	.	END=8354060;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999679:3,3:3-3,3-3:15,16,0,0:3,15:NULL:195.511:366.612,131.36:0.0,0.0:0.0,0.000194791,0.999805	0/0:13:0.945666:3,3:3-3,3-3:7,4,0,2:3,7:2,2:78.2415:326.675,113.385:0.0,0.0:2.55084e-23,0.0192365,0.980801
-chr1	8357311	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8357328;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.979753:9,9:8-9,8-9:19,16,0,0:8,2|9,17:NULL:234.28:366.612,131.36:0.390807,0.390807:8.54647e-27,0.0202936,0.979746	0/0:43:1.0:9,9:9-9,9-9:26,12,0,4:9,26:6,1|7,1|8,2:242.065:326.675,113.385:0.0,0.0:0.0,6.70531e-08,1.0
-chr1	8366194	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8366227;RU=ct;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.236521:26,26:23-26,23-26:2,18,0,13:26,2:5,3|11,1|13,1|17,2|18,2|22,3|23,1:278.578:366.612,131.36:1.449,1.449:0.0,0.0,1.0	0/0:43:0.763277:17,17:16-17,16-17:21,12,0,8:16,6|17,15:4,1|9,2|11,1|12,1|13,1|14,1|16,1:277.096:326.675,113.385:0.696878,0.696878:3.64364e-12,0.236711,0.763312
-chr1	8366995	.	ATATATATATATATATATATATATATATATATAT	ATATATATATATATATAT	.	.	END=8367028;RU=at;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0306099:9,9:9-14,9-14:0,11,0,2:NULL:4,1|9,1:114.917:366.612,131.36:1.76671,1.76671:0.881275,0.115555,0.00327874	0/0:8:0.729332:17,17:17-17,17-17:6,2,0,0:17,6:NULL:46.4011:326.675,113.385:0.0,0.0:1.36574e-06,0.105537,0.894565
-chr1	8371543	.	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	.	.	END=8371606;RU=aaag;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:13:0.926383:16,17:16-17,16-17:5,6,0,2:16,2|17,3:10,1|15,1:99.6572:366.612,131.36:0.429525,0.290354:4.86265e-08,0.0197682,0.980273	0/0:21:0.685203:16,16:16-16,16-16:5,8,0,8:16,5:5,2|7,1|10,1|11,2|12,1|14,1:155.276:326.675,113.385:0.19802,0.19802:1.05189e-07,0.206014,0.794033
-chr1	8374412	.	TTGTTGTTGTTGTTGTTGTTG	.	.	.	END=8374432;RU=ttg;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:7,7:7-7,7-7:19,12,0,5:7,19:4,2|5,2|6,1:221.878:366.612,131.36:0.0,0.0:0.0,8.39317e-06,0.999994	0/0:33:0.999219:7,7:7-7,7-7:13,14,0,6:7,13:3,1|4,2|6,3:226.934:326.675,113.385:0.0,0.0:4.64972e-32,0.000408752,0.999592
-chr1	8374431	.	TGATGATGATGATGATGA	.	.	.	END=8374448;RU=tga;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:6,6:6-6,6-6:21,13,0,4:6,21:3,1|4,2|5,1:227.019:366.612,131.36:0.0,0.0:0.0,1.39271e-06,1.0	0/0:34:0.999992:6,6:6-6,6-6:18,11,0,5:6,18:3,1|4,3|5,1:213.13:326.675,113.385:0.0,0.0:0.0,1.50354e-05,0.999986
-chr1	8378065	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	.	END=8378114;RU=tcttt;PERIOD=5;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.753591:10,10:10-10,10-10:5,9,0,5:10,5:3,1|4,1|7,2|9,1:143.055:366.612,131.36:0.139319,0.139319:3.18022e-16,0.130091,0.870006	0/0:22:0.902909:10,10:9-10,9-10:7,8,0,6:10,7:2,1|3,1|5,1|6,1|7,1|8,1:149.552:326.675,113.385:0.607117,0.607117:1.93876e-22,0.0627019,0.937389
-chr1	8383454	.	TAATTAATTAATTAAT	TAATTAATTAAT	.	.	END=8383469;RU=taat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.700614:3,4:3-4,4-4:17,13,0,0:3,2|4,15:NULL:198.121:366.612,131.36:0.499975,0.0:1.21728e-38,0.700637,0.29937	0/0:24:0.999182:4,4:4-4,4-4:14,10,0,0:4,14:NULL:152.232:326.675,113.385:0.0,0.0:1.50491e-40,0.000573469,0.999431
-chr1	8384813	.	TGTGTGTGTGTG	.	.	.	END=8384824;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.998269:6,6:5-6,5-6:26,17,0,2:5,3|6,23:5,2:287.022:366.612,131.36:0.311527,0.311527:0.0,0.00173601,0.998269	0/0:44:1.0:6,6:6-6,6-6:26,17,0,0:6,26:NULL:264.41:326.675,113.385:0.139319,0.139319:0.0,1.56232e-07,1.0
-chr1	8389556	.	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	.	.	END=8389603;RU=tatc;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:59:0.571161:11,12:11-11,11-12:15,26,0,18:11,15:3,2|4,2|5,3|6,1|7,4|8,1|10,2|11,2|12,1:446.744:366.612,131.36:0.0,0.48221:0.00027855,0.999721,9.60695e-16	0/0:41:0.966978:12,12:11-12,11-12:8,19,0,13:12,8:3,3|5,2|8,3|10,2|11,3:308.233:326.675,113.385:0.419363,0.419363:6.27891e-11,0.0183287,0.981709
-chr1	8389896	.	ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	.	.	.	END=8389935;RU=atct;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:0.981228:10,10:10-10,10-10:9,20,0,14:10,9:2,2|3,1|4,3|5,2|6,2|8,2|9,2:327.676:366.612,131.36:0.19802,0.19802:4.86114e-22,0.01021,0.989813	0/0:51:0.999886:10,10:10-10,10-10:16,22,0,13:10,16:4,3|5,1|6,2|7,2|8,2|9,3:363.177:326.675,113.385:0.0,0.0:4.44127e-38,8.00208e-05,0.999924
-chr1	8389961	.	TTTGTTTGTTTG	.	.	.	END=8389972;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:218.76:366.612,131.36:0.0,0.0:0.0,2.83242e-06,1.0	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:348.37:326.675,113.385:0.0,0.0:0.0,3.40439e-08,1.0
-chr1	8409196	.	AAAAACAAAAACAAAAAC	.	.	.	END=8409213;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.783:366.612,131.36:0.0,0.0:0.0,4.60431e-08,1.0	0/0:14:0.983591:3,3:3-3,3-3:9,5,0,0:3,9:NULL:83.7495:326.675,113.385:0.0,0.0:3.68951e-30,0.00828025,0.991741
-chr1	8410948	.	CGCTCGCTCGCT	.	.	.	END=8410959;RU=cgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99408:3,3:3-3,3-3:11,15,0,0:3,11:NULL:183.329:366.612,131.36:0.0,0.0:2.54557e-38,0.00344241,0.996565	0/0:64:1.0:3,3:3-3,3-3:39,19,0,6:3,39:2,6:366.886:326.675,113.385:0.0,0.0:0.0,6.181e-12,1.0
-chr1	8413506	.	TTATTTATTTAT	.	.	.	END=8413517;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.0:3,3:3-3,3-3:23,8,0,2:3,23:2,2:176.382:366.612,131.36:0.0,0.0:0.0,3.84885e-07,1.0	0/0:22:0.999463:3,3:3-3,3-3:14,8,0,0:3,14:NULL:128.065:326.675,113.385:0.0,0.0:0.0,0.000323489,0.999681
-chr1	8415286	.	AAACAAACAAACAAACAAAC	.	.	.	END=8415305;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999777:5,5:5-5,5-5:15,21,0,6:5,15:2,1|3,2|4,3:303.295:366.612,131.36:0.0,0.0:0.0,9.65488e-05,0.999903	0/0:43:1.00001:5,5:5-5,5-5:23,13,0,7:5,23:2,1|3,5|4,1:263.434:326.675,113.385:0.0,0.0:0.0,8.23304e-07,1.0
-chr1	8418293	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=8418328;RU=tgtt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:8,8:8-8,8-8:19,22,0,9:8,19:3,1|4,3|5,4|7,1:347.812:366.612,131.36:0.139319,0.139319:0.999995,4.34615e-06,1.75392e-34	0/0:44:1.0:9,9:9-9,9-9:24,13,0,6:9,24:3,1|4,1|6,1|7,1|8,2:265.715:326.675,113.385:0.0,0.0:0.0,3.37734e-07,1.0
-chr1	8419081	.	AAATAAATAAAT	.	.	.	END=8419092;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:21,15,0,0:3,21:NULL:220.143:366.612,131.36:0.0,0.0:0.0,4.41593e-06,0.999995	0/0:30:0.999885:3,3:2-3,2-3:16,13,0,0:3,16:NULL:178.943:326.675,113.385:0.419363,0.419363:0.0,7.18237e-05,0.999932
-chr1	8420846	.	AAATAAATAAAT	.	.	.	END=8420857;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:211.937:366.612,131.36:0.0,0.0:0.0,3.35584e-06,1.0	0/0:28:0.999923:3,3:3-3,3-3:17,11,0,0:3,17:NULL:163.458:326.675,113.385:0.0,0.0:0.0,4.61361e-05,0.999956
-chr1	8423083	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8423108;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.172272:21,21:18-22,18-22:2,4,0,2:21,2:11,1|14,1:60.6674:366.612,131.36:0.881911,0.881911:0.0,0.0,1.0	0/0:20:0.596815:13,13:11-14,11-14:14,6,0,0:11,2|12,2|13,8|14,2:NULL:135.215:326.675,113.385:0.827074,0.827074:9.63291e-06,0.326822,0.673181
-chr1	8424107	.	CCAGCCAGCCAG	.	.	.	END=8424118;RU=ccag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:24,13,0,0:3,24:NULL:211.855:366.612,131.36:0.0,0.0:0.0,2.95663e-07,1.0	0/0:27:1.00001:3,3:3-3,3-3:22,5,0,0:3,22:NULL:132.923:326.675,113.385:0.0,0.0:0.0,9.49426e-07,1.0
-chr1	8433296	.	TATTTATTTATT	.	.	.	END=8433307;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:177.46:366.612,131.36:0.0,0.0:0.0,5.30392e-08,1.0	0/0:10:0.980539:3,3:3-3,3-3:9,1,0,0:3,9:NULL:45.09:326.675,113.385:0.0,0.0:1.04721e-29,0.00803098,0.991988
-chr1	8433511	.	TATATATATATATATATATA	TATATATATATATATATA,TATATATATATATATATATATA	.	.	END=8433530;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.973682:9,9:8-9,8-9:19,22,0,0:8,3|9,16:NULL:292.357:366.612,131.36:0.438559,0.438559:0.999979,2.24515e-05,6.28827e-20	2/2:10:0.143587:11,11:8-11,8-11:2,5,0,0:11,2:NULL:53.8357:326.675,113.385:0.842923,0.842923:0.000431743,0.502089,0.497491
-chr1	8433926	.	TATATATATATA	.	.	.	END=8433937;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999997:6,6:6-7,6-7:19,12,0,0:6,19:NULL:189.643:366.612,131.36:0.169767,0.169767:1.64088e-30,1.25063e-05,0.999987	0/0:22:0.999781:6,6:6-6,6-6:16,5,0,0:6,16:NULL:109.602:326.675,113.385:0.139319,0.139319:9.12765e-26,0.000111527,0.999888
-chr1	8456266	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8456293;RU=ag;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.155711:16,16:16-27,16-27:2,4,0,0:16,2:NULL:47.4802:366.612,131.36:5.3798,5.3798:6.48768e-08,0.0609947,0.939094	0/0:29:0.99989:14,14:11-14,11-14:17,4,0,7:14,17:4,1|5,1|8,1|9,1|10,2|13,1:166.18:326.675,113.385:1.00465,1.00465:4.58367e-29,4.43602e-05,0.999956
-chr1	8470720	.	TCTCTCTCTCTCTC	.	.	.	END=8470733;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.16141:7,7:7-24,7-24:22,13,0,2:7,22:5,1|21,1:239.062:366.612,131.36:8.06485,8.06485:0.0,2.46782e-07,1.0	0/0:34:0.999993:7,7:7-7,7-7:19,15,0,0:7,19:NULL:221.843:326.675,113.385:0.0,0.0:8.84e-43,1.81607e-05,0.999985
-chr1	8470767	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8470826;RU=ct;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.892976:22,22:22-22,22-22:8,12,0,5:22,8:6,1|18,1|19,1|21,2:184.724:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/2:21:0.0222805:26,26:25-29,25-29:0,11,0,8:NULL:6,3|7,1|11,1|15,1|16,1|17,1:174.168:326.675,113.385:1.64368,1.64368:0.722255,0.257109,0.0206627
-chr1	8470857	.	CTCTCTCTCTCTCTCT	.	.	.	END=8470872;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999933:8,8:8-8,8-8:18,18,0,0:8,18:NULL:233.544:366.612,131.36:0.0990099,0.0990099:3.36816e-33,4.64844e-05,0.999956	0/0:27:0.868555:8,8:8-8,8-8:6,18,0,3:8,6:6,3:216.942:326.675,113.385:0.0,0.0:1.3158e-11,0.0731223,0.926973
-chr1	8477191	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=8477250;RU=ga;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:19:0.0277315:32,32:31-34,31-34:0,9,0,7:NULL:7,1|11,1|14,1|18,1|26,1|31,1|32,1:140.727:366.612,131.36:1.27412,1.27412:2.35232e-16,0.152828,0.84725	1/0:19:0.513868:29,30:23-30,23-30:4,9,0,5:29,2|30,2:7,1|12,1|15,1|18,1|19,1:147.648:326.675,113.385:1.81115,1.95434:0.0172261,0.766209,0.216644
-chr1	8480096	.	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA,AGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGAAGAAAGGA	.	.	END=8480191;RU=agaaagga;PERIOD=8;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/0:24:0.998877:7,12:4-9,11-12:6,8,0,6:7,2|12,4:3,2|6,1|8,2|10,1:150.18:366.612,131.36:1.54513,0.456091:4.45744e-11,1.0,6.69644e-08	1/3:35:0.364967:6,10:6-11,9-11:4,11,0,18:6,4:2,1|3,2|4,1|5,2|6,3|7,1|8,1|9,5|10,2:242.488:326.675,113.385:0.899956,0.56427:0.61593,0.38413,1.79851e-19
-chr1	8496447	.	TCTCTCTCTCTC	TCTCTCTCTCTCTC	.	.	END=8496458;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.998725:7,7:5-7,5-7:14,14,0,0:7,14:NULL:191.968:366.612,131.36:0.863148,0.863148:0.0,0.000871573,0.999134	0/0:28:1.00001:6,6:6-6,6-6:21,7,0,0:6,21:NULL:146.068:326.675,113.385:0.0,0.0:7e-45,3.71249e-06,1.0
-chr1	8498887	.	TGTGTGTGTGTG	.	.	.	END=8498898;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:6,6:6-6,6-6:22,19,0,5:6,22:4,1|5,4:293.567:366.612,131.36:0.0,0.0:0.0,5.43531e-07,1.0	0/0:23:0.999971:6,6:6-6,6-6:18,5,0,0:6,18:NULL:113.239:326.675,113.385:0.0,0.0:8.34546e-39,2.40389e-05,0.999979
-chr1	8500395	.	AGGAAGGAAGGA	.	.	.	END=8500406;RU=agga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:217.263:366.612,131.36:0.0,0.0:0.0,6.90293e-07,1.0	0/0:27:0.999531:3,3:3-3,3-3:14,11,0,2:3,14:2,2:170.995:326.675,113.385:0.0,0.0:0.0,0.000248712,0.999751
-chr1	8503531	.	TAAATAAATAAA	.	.	.	END=8503542;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999993:3,3:3-3,3-3:19,16,0,0:3,19:NULL:221.348:366.612,131.36:0.0,0.0:0.0,1.39744e-05,0.999987	0/0:26:0.998985:3,3:3-3,3-3:13,9,0,4:3,13:2,4:161.383:326.675,113.385:0.0,0.0:1.3e-43,0.000375542,0.999628
-chr1	8504809	.	TTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=8504823;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:52:0.999994:7,7:4-7,4-7:19,26,0,6:7,19:3,2|4,1|5,2|6,1:356.642:366.612,131.36:0.896026,0.896026:0.0,1.83484e-06,1.0	0/0:37:1.00001:5,5:5-5,5-5:23,8,0,6:5,23:3,1|4,5:210.727:326.675,113.385:0.0,0.0:0.0,2.7635e-07,1.0
-chr1	8528507	.	TTGTTGTTGTTG	.	.	.	END=8528518;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:4,4:4-4,4-4:22,13,0,0:4,22:NULL:203.703:366.612,131.36:0.0,0.0:0.0,9.52647e-07,1.0	0/0:26:0.999939:4,4:4-4,4-4:17,7,0,2:4,17:3,2:151.591:326.675,113.385:0.0,0.0:0.0,3.18312e-05,0.999971
-chr1	8529981	.	AACCAACCAACCAACC	AACCAACCAACC	.	.	END=8529996;RU=aacc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:40:1.0:3,4:3-3,4-4:27,11,0,2:3,10|4,17:2,1|3,1:240.874:366.612,131.36:0.0,0.0:0.0,1.0,4.47201e-20	0/0:24:0.985496:4,4:4-4,4-4:10,14,0,0:4,10:NULL:167.18:326.675,113.385:0.0,0.0:3.47962e-34,0.0120016,0.988025
-chr1	8536034	.	AAAACAAAACAAAAC	.	.	.	END=8536048;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:227.476:366.612,131.36:0.0,0.0:0.0,1.08851e-05,0.999993	0/0:38:1.00001:3,3:3-3,3-3:23,15,0,0:3,23:NULL:233.041:326.675,113.385:0.0,0.0:0.0,2.21728e-06,1.0
-chr1	8536113	.	CAACAACAACAACAACAACAACAACAA	CAACAACAACAACAACAA	.	.	END=8536139;RU=caa;PERIOD=3;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.495472:6,6:3-9,3-9:4,14,0,0:6,4:NULL:145.49:366.612,131.36:1.9144,1.9144:0.918823,0.0812714,3.42406e-12	0/0:34:0.999281:9,9:9-9,9-9:14,16,0,4:9,14:4,1|5,1|8,2:234.098:326.675,113.385:0.0,0.0:2.68761e-26,0.000352468,0.999651
-chr1	8536661	.	ACAACAACAACA	.	.	.	END=8536672;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.00001:4,4:4-4,4-4:22,9,0,0:4,22:NULL:168.447:366.612,131.36:0.0,0.0:0.0,3.16091e-06,1.0	0/0:27:0.999897:4,4:4-4,4-4:16,8,0,3:4,16:3,3:158.328:326.675,113.385:0.0,0.0:0.0,3.98677e-05,0.999963
-chr1	8536682	.	CAAACAAACAAA	.	.	.	END=8536693;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999998:3,3:3-3,3-3:19,10,0,2:3,19:2,2:179.592:366.612,131.36:0.0,0.0:0.0,1.04607e-05,0.999993	0/0:24:0.999723:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.967:326.675,113.385:0.0,0.0:0.0,0.000151341,0.99985
-chr1	8537537	.	TTTGTTTTGTTTTGTTTTGT	.	.	.	END=8537556;RU=tttgt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.99989:4,4:3-4,3-4:16,7,0,4:4,16:2,1|3,3:155.271:366.612,131.36:0.40582,0.40582:0.0,4.45846e-05,0.999956	0/0:20:0.991856:4,4:4-4,4-4:10,8,0,2:4,10:3,2:128.224:326.675,113.385:0.0,0.0:6.05885e-31,0.00459612,0.995416
-chr1	8543734	.	AAATAAATAAAT	.	.	.	END=8543745;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:200.084:366.612,131.36:0.0,0.0:0.0,8.25062e-08,1.0	0/0:16:0.997637:3,3:3-3,3-3:12,4,0,0:3,12:NULL:81.7413:326.675,113.385:0.0,0.0:2.84343e-35,0.00106447,0.998938
-chr1	8554881	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=8554988;RU=agaggc;PERIOD=6;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:31:0.298195:6,21:5-13,13-21:2,6,0,21:6,2:2,2|3,2|4,3|5,1|6,1|7,1|8,3|9,1|10,2|12,1|16,2|18,1|19,1:216.764:366.612,131.36:3.12548,1.90866:4.36146e-16,1.0,3.07779e-23	2/0:51:0.994923:13,18:4-13,17-18:5,18,0,25:13,3|17,2:3,2|4,2|5,1|7,5|8,4|9,2|10,1|12,1|13,2|14,1|15,2|16,1|18,1:373.705:326.675,113.385:2.97959,0.547696:1.91093e-05,0.999985,2.24371e-15
-chr1	8557824	.	ACACACACACACAC	ACACACACACAC	.	.	END=8557837;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.994354:6,6:6-7,6-7:12,10,0,0:6,12:NULL:136.46:366.612,131.36:0.412766,0.412766:0.997344,0.00266321,3.95322e-22	0/0:35:1.00001:7,7:7-7,7-7:21,11,0,2:7,21:4,1|6,1:197.338:326.675,113.385:0.139319,0.139319:1.6042e-41,2.70255e-06,1.0
-chr1	8567230	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	TTATTATTATTATTATTATTATTATTATTATTA	.	.	END=8567268;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.97243:11,11:11-11,11-11:9,8,0,0:11,9:NULL:111.207:366.612,131.36:0.0,0.0:0.993655,0.00635861,1.57671e-20	0/0:14:0.809962:13,13:13-13,13-13:6,6,0,2:13,6:3,1|9,1:98.1398:326.675,113.385:0.0,0.0:1.63673e-10,0.119958,0.880145
-chr1	8574197	.	CACACACACACA	.	.	.	END=8574208;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:6,6:6-6,6-6:21,17,0,0:6,21:NULL:234.116:366.612,131.36:0.0,0.0:1e-45,4.21085e-06,0.999995	0/0:36:1.0:6,6:6-6,6-6:25,9,0,2:6,25:4,2:198.818:326.675,113.385:0.0,0.0:0.0,2.05172e-07,1.0
-chr1	8575616	.	TGGTGGTGGTGGTGGTGG	.	.	.	END=8575633;RU=tgg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999936:6,6:6-6,6-6:17,16,0,2:6,17:5,2:234.43:366.612,131.36:0.0,0.0:2.7e-44,3.00017e-05,0.999971	0/0:28:0.999978:6,6:6-6,6-6:18,8,0,2:6,18:4,1|5,1:159.315:326.675,113.385:0.0,0.0:0.0,1.73442e-05,0.999986
-chr1	8580889	.	GTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGT	.	.	END=8580912;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.989305:10,10:9-10,9-10:17,21,0,4:9,2|10,15:5,2|7,1|9,1:302.27:366.612,131.36:0.298675,0.298675:0.999971,3.22529e-05,3.67174e-31	0/0:40:0.999625:12,12:12-13,12-13:24,10,0,5:12,22|13,2:5,3|11,2:236.795:326.675,113.385:0.284901,0.284901:6.62828e-34,5.70766e-07,1.0
-chr1	8584648	.	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8584699;RU=ac;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0306459:11,11:11-14,11-14:0,8,0,0:NULL:NULL:72.4529:366.612,131.36:0.952864,0.952864:1.0,0.0,0.0	0/0:9:0.24064:26,26:23-26,23-26:2,2,0,5:26,2:5,1|8,1|9,1|14,1|18,1:66.5773:326.675,113.385:0.772658,0.772658:0.000298698,0.390389,0.609378
-chr1	8584700	.	ATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATAT,ATATATATATATATATATATATATATATATATATATAT	.	.	END=8584747;RU=at;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:10:0.0316378:19,19:17-20,17-20:0,9,0,0:NULL:NULL:82.3892:366.612,131.36:1.15795,1.15795:1.0,0.0,0.0	1/1:1:0.000252147:6,6:6-6,6-6:0,1,0,0:NULL:NULL:8.42831:326.675,113.385:0.0,0.0:0.107513,0.489833,0.402853
-chr1	8585797	.	TATTTATTTATTTATT	.	.	.	END=8585812;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.991404:4,4:4-4,4-4:11,15,0,0:4,11:NULL:180.622:366.612,131.36:0.0,0.0:6.17043e-36,0.00623376,0.993782	0/0:24:0.998301:4,4:4-4,4-4:13,11,0,0:4,13:NULL:151.104:326.675,113.385:0.0,0.0:9.11e-43,0.00118285,0.998823
-chr1	8586014	.	TTTATTTATTTA	.	.	.	END=8586025;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.996092:3,3:3-3,3-3:12,11,0,0:3,12:NULL:150.001:366.612,131.36:0.0,0.0:5.02997e-39,0.00182207,0.998185	0/0:22:0.999869:3,3:3-3,3-3:16,6,0,0:3,16:NULL:116.173:326.675,113.385:0.0,0.0:0.0,7.8491e-05,0.999925
-chr1	8594736	.	TGTGTGTGTGTGTG	.	.	.	END=8594749;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.99945:7,7:7-7,7-7:14,18,0,2:7,14:6,2:240.607:366.612,131.36:0.0,0.0:1.37954e-27,0.000272071,0.999728	0/0:29:0.99987:7,7:7-7,7-7:16,8,0,5:7,16:4,1|5,2|6,2:178.756:326.675,113.385:0.0,0.0:7.19342e-32,4.09985e-05,0.999963
-chr1	8596349	.	TGTGTGTGTGTG	.	.	.	END=8596360;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.986206:6,6:6-6,6-6:10,8,0,0:6,10:NULL:106.886:366.612,131.36:0.0,0.0:6.00194e-24,0.00732323,0.992693	0/0:20:0.986306:6,6:6-6,6-6:10,10,0,0:6,10:NULL:133.658:326.675,113.385:0.0,0.0:4.46305e-24,0.00791973,0.9921
-chr1	8597826	.	CACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=8597851;RU=ca;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.818865:15,15:15-15,15-15:6,3,0,0:15,6:NULL:51.6084:366.612,131.36:0.0,0.0:7.6657e-20,0.0258792,0.97417	0/0:11:0.40379:13,13:13-14,13-14:3,3,0,4:13,3:5,1|11,1|12,2:69.6071:326.675,113.385:0.518267,0.518267:6.64642e-05,0.161811,0.838196
-chr1	8614957	.	AAACAAACAAACAAACAAAC	.	.	.	END=8614976;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:5,5:5-5,5-5:27,13,0,3:5,27:3,3:252.777:366.612,131.36:0.0,0.0:0.0,9.01005e-08,1.0	0/0:23:0.995445:5,5:5-5,5-5:11,10,0,2:5,11:4,2:149.524:326.675,113.385:0.0,0.0:6.34409e-38,0.00224629,0.997761
-chr1	8619173	.	GTTGTTGTTGTTGTT	GTTGTTGTTGTT,GTTGTTGTTGTTGTTGTT	.	.	END=8619187;RU=gtt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.0910916:4,6:4-7,4-7:0,15,0,4:NULL:3,1|4,3:169.146:366.612,131.36:1.17826,1.11561:0.0425979,0.336559,0.620952	0/0:20:0.997823:5,5:5-5,5-5:12,6,0,2:5,12:4,2:118.793:326.675,113.385:0.0,0.0:3.09658e-36,0.000974604,0.999028
-chr1	8628070	.	TTTGTTTGTTTG	TTTG	.	.	END=8628081;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0968113:1,1:1-2,1-2:0,20,0,0:NULL:NULL:185.299:366.612,131.36:0.506017,0.506017:0.302128,0.512574,0.185307	0/0:18:0.996572:3,3:3-3,3-3:11,5,0,2:3,11:2,2:106.536:326.675,113.385:0.0,0.0:2.83415e-36,0.00109878,0.998906
-chr1	8628100	.	TTGTTTTGTTTTGTT	.	.	.	END=8628114;RU=ttgtt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999919:3,3:3-3,3-3:17,23,0,0:3,17:NULL:278.982:366.612,131.36:0.0,0.0:0.0,7.79595e-05,0.999925	0/0:21:0.999719:3,3:3-3,3-3:15,6,0,0:3,15:NULL:116.395:326.675,113.385:0.0,0.0:0.0,0.000150872,0.99985
-chr1	8628129	.	TTTATTTTTATTTTTATT	.	.	.	END=8628146;RU=tttatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999891:3,3:3-3,3-3:16,18,0,2:3,16:2,2:247.617:366.612,131.36:0.0,0.0:0.0,7.63338e-05,0.999925	0/0:19:0.999864:3,3:3-3,3-3:16,3,0,0:3,16:NULL:95.0823:326.675,113.385:0.0,0.0:0.0,7.19751e-05,0.999932
-chr1	8631314	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC	.	.	END=8631341;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.988226:14,14:13-14,13-14:18,5,0,2:13,3|14,15:7,1|11,1:144.884:326.675,113.385:0.236383,0.236383:1.25388e-15,0.0117186,0.988308
-chr1	8631352	.	TGTGTGTGTGTGTGTGTGTGTG	TG	.	.	END=8631373;RU=tg;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:22:0.679657:11,11:10-12,10-12:14,5,0,3:10,2|11,10|12,2:5,1|10,2:139.777:326.675,113.385:0.653165,0.653165:1.8551e-16,0.0629716,0.937121
-chr1	8631769	.	TTTTGTTTTGTTTTG	TTTTG	.	.	END=8631783;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:23:0.998185:3,3:3-3,3-3:12,9,0,2:3,12:2,2:143.831:326.675,113.385:0.0,0.0:2.94001e-37,0.000914917,0.999089
-chr1	8631787	.	GTTTGTTTGTTT	GTTT	.	.	END=8631798;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:172.164:326.675,113.385:0.0,0.0:0.0,1.10055e-05,0.999993
-chr1	8632668	.	CCCACCCACCCA	CCCACCCACCCACCCACCCA	.	.	END=8632679;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.996957:5,5:5-5,5-5:12,0,0,0:5,12:NULL:48.0199:366.612,131.36:0.0,0.0:1.27465e-30,0.000505948,0.999499	0/1:36:1.0:3,5:3-3,5-5:31,5,0,0:3,18|5,13:NULL:191.55:326.675,113.385:0.0,0.0:0.0,1.0066e-26,1.0
-chr1	8633725	.	ATAAATAAATAA	ATAA	.	.	END=8633736;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:24:0.999912:3,3:3-3,3-3:17,7,0,0:3,17:NULL:135.44:326.675,113.385:0.0,0.0:0.0,5.65693e-05,0.999947
-chr1	8633735	.	AACAACAACAAC	AAC	.	.	END=8633746;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:26:0.999715:4,4:4-4,4-4:16,10,0,0:4,16:NULL:157.321:326.675,113.385:0.0,0.0:1e-45,0.000207364,0.999796
-chr1	8635079	.	ACCCACCCACCC	.	.	.	END=8635090;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:4:0.436831:3,3:3-3,3-3:3,1,0,0:3,3:NULL:19.9896:366.612,131.36:0.0990099,0.0990099:1.20682e-08,0.229503,0.77053	0/0:11:0.808579:3,3:3-3,3-3:5,6,0,0:3,5:NULL:73.0765:326.675,113.385:0.0,0.0:7.69984e-14,0.0907137,0.909384
-chr1	8641425	.	TCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=8641448;RU=tc;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997989:12,12:12-12,12-12:12,11,0,5:12,12:5,1|6,2|11,2:194.886:366.612,131.36:0.0,0.0:2.21356e-21,0.000836114,0.999166	0/0:17:0.998552:12,12:12-12,12-12:13,2,0,2:12,13:6,1|11,1:88.402:326.675,113.385:0.0,0.0:6.60585e-23,0.000666587,0.999339
-chr1	8642579	.	AAATAAATAAAT	.	.	.	END=8642590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.00001:3,3:3-4,3-4:19,29,0,4:3,19:2,4:367.151:366.612,131.36:0.253975,0.253975:0.0,6.69503e-06,0.999994	0/0:28:0.999431:3,3:3-3,3-3:14,12,0,2:3,14:2,2:180.869:326.675,113.385:0.0,0.0:1.361e-41,0.00026199,0.999742
-chr1	8642988	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8643027;RU=tc;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.321181:15,19:15-15,15-22:8,12,0,4:15,8:7,1|8,1|10,1|19,1:188.563:366.612,131.36:0.0,2.24742:0.321103,0.678909,4.43521e-22	0/0:27:0.41447:20,20:19-20,19-20:8,11,0,8:19,3|20,5:6,1|8,1|11,1|13,1|14,1|16,1|18,1|19,1:206.384:326.675,113.385:0.484441,0.484441:3.2159e-05,0.557393,0.442685
-chr1	8643034	.	TCTATCTATCTA	TCTATCTA	.	.	END=8643045;RU=tcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.0739848:2,2:1-3,1-3:0,16,0,0:NULL:NULL:151.244:366.612,131.36:0.765136,0.765136:0.269062,0.506557,0.224385	0/0:27:0.999628:3,3:2-3,2-3:15,11,0,0:3,15:NULL:161.037:326.675,113.385:0.323567,0.323567:7.78753e-29,0.000218365,0.999782
-chr1	8643653	.	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTT	.	.	END=8643682;RU=tgttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0460221:4,4:2-5,2-5:0,17,0,2:NULL:4,2:163.884:366.612,131.36:1.01097,1.01097:0.386743,0.490343,0.123007	0/0:34:0.999927:6,6:6-6,6-6:17,11,0,5:6,17:3,3|4,1|5,1:207.421:326.675,113.385:0.139319,0.139319:1e-45,5.03197e-05,0.999949
-chr1	8643693	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8643718;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:25:0.32159:14,17:12-14,12-18:2,15,0,6:14,2:5,1|6,1|11,1|13,1|14,1|17,1:192.189:366.612,131.36:0.680941,1.99696:6.49809e-26,0.000350704,0.999652	0/2:38:0.456917:13,15:13-13,13-15:19,12,0,6:12,2|13,17:5,1|6,1|8,1|10,1|12,1|15,1:257.188:326.675,113.385:0.0,1.01474:4.28029e-29,3.84308e-06,1.0
-chr1	8646828	.	TATTTATTTATTTATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATT	.	.	END=8646863;RU=tatt;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.99891:7,7:7-7,7-7:13,18,0,2:7,13:4,1|6,1:234.583:366.612,131.36:0.0,0.0:0.999819,0.000181101,1.7486e-33	0/0:25:0.998611:9,9:4-9,4-9:13,6,0,4:9,13:6,1|7,2|8,1:137.185:326.675,113.385:2.04948,2.04948:8.80789e-28,0.000791479,0.999211
-chr1	8650375	.	ACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=8650398;RU=ac;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.996598:16,16:16-18,16-18:16,11,0,6:15,2|16,14:6,1|7,1|9,1|15,3:222.279:366.612,131.36:0.581383,0.581383:0.0,0.0,1.0	0/0:24:0.984644:12,12:11-12,11-12:17,3,0,4:11,3|12,14:8,1|11,3:137.599:326.675,113.385:0.270063,0.270063:5.28161e-17,0.0152271,0.984803
-chr1	8650639	.	ATATATATATATATATATATATATATATATATATATATAT	AT,ATATATATATATATATATATATATATATATAT	.	.	END=8650678;RU=at;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:4:0.00128449:1,1:1-6,1-6:0,4,0,0:NULL:NULL:35.4749:366.612,131.36:1.92492,1.92492:0.248497,0.563877,0.187649	2/2:4:0.0175477:16,16:16-20,16-20:0,2,0,0:NULL:NULL:17.2343:326.675,113.385:0.900283,0.900283:0.271692,0.499525,0.228792
-chr1	8650679	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC	.	.	END=8650710;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.299029:19,19:17-19,17-19:3,3,0,0:19,3:NULL:41.0175:366.612,131.36:0.813329,0.813329:7.60869e-10,0.18253,0.817535	0/0:8:0.436188:16,16:16-16,16-16:3,3,0,2:16,3:11,1|15,1:54.5607:326.675,113.385:0.19802,0.19802:1.21553e-05,0.246219,0.753781
-chr1	8651209	.	AATAAATAAATA	AATA	.	.	END=8651220;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:15:0.0982358:1,1:1-3,1-3:0,14,0,0:NULL:NULL:125.293:366.612,131.36:0.975134,0.975134:0.238523,0.50738,0.254128	0/0:32:1.0:3,3:3-3,3-3:24,5,0,3:3,24:2,3:160.953:326.675,113.385:0.0,0.0:0.0,1.48101e-07,1.0
-chr1	8651810	.	AAAACAAAAACAAAAACA	.	.	.	END=8651827;RU=aaaaca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:211.408:366.612,131.36:0.0,0.0:0.0,1.21047e-07,1.0	0/0:18:0.989372:3,3:3-3,3-3:10,8,0,0:3,10:NULL:112.49:326.675,113.385:0.0,0.0:6.9492e-33,0.0064146,0.993602
-chr1	8653498	.	AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA	.	.	.	END=8653537;RU=aagaa;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.503954:8,8:5-8,5-8:4,12,0,0:8,4:NULL:126.321:366.612,131.36:0.761926,0.761926:6.16962e-12,0.372315,0.627739	0/0:30:0.998573:8,8:8-8,8-8:13,12,0,5:8,13:3,1|4,1|5,2|7,1:202.014:326.675,113.385:0.0,0.0:4.65052e-38,0.000786841,0.999218
-chr1	8654962	.	CTCTCTCCTCTCTCCTCTCTC	CTCTCTC	.	.	END=8654982;RU=ctctctc;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.250215:1,1:1-1,1-1:0,18,0,0:NULL:NULL:160.895:366.612,131.36:0.0990099,0.0990099:0.520212,0.417376,0.0625452	0/0:25:0.99915:3,3:3-3,3-3:14,11,0,0:3,14:NULL:158.356:326.675,113.385:0.0,0.0:5.11259e-39,0.00063414,0.99937
-chr1	8655539	.	TGTATATACAGTTTGTATATACAGTTTGTATATACAGTT	.	.	.	END=8655577;RU=tgtatatacagtt;PERIOD=13;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.991493:3,3:3-3,3-3:11,14,0,0:3,11:NULL:171.34:366.612,131.36:0.0,0.0:6.08752e-14,0.00739242,0.992625	0/0:38:1.0:3,3:3-3,3-3:27,11,0,0:3,27:NULL:220.313:326.675,113.385:0.0,0.0:7.89224e-34,2.1361e-07,1.0
-chr1	8661278	.	TCTGCGCACTGCCTCTCTGCGCACTGCCTCTCTGCGCACTGCCTC	.	.	.	END=8661322;RU=tctgcgcactgcctc;PERIOD=15;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.735443:3,3:1-3,1-3:5,4,0,0:3,5:NULL:63.5448:366.612,131.36:0.339533,0.339533:1.33779e-06,0.179636,0.820434	0/0:27:0.999987:3,3:3-3,3-3:20,7,0,0:3,20:NULL:149.294:326.675,113.385:0.0,0.0:1.29928e-24,2.25915e-05,0.999979
-chr1	8662879	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8662932;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.559272:24,24:21-24,21-24:4,17,0,14:24,4:5,1|6,1|7,3|9,1|12,2|14,1|17,1|19,1|21,2|22,1:288.885:366.612,131.36:1.34719,1.34719:0.955649,0.044423,3.39378e-08	0/0:30:0.79467:27,27:26-28,26-28:6,9,0,13:27,6:8,1|11,1|13,1|14,1|15,1|16,2|17,1|18,2|22,1|23,1|27,1:210.896:326.675,113.385:0.464609,0.464609:1.75214e-14,0.0702106,0.929885
-chr1	8670288	.	AAATAAATAAAT	.	.	.	END=8670299;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999475:3,3:3-3,3-3:14,13,0,0:3,14:NULL:169.599:366.612,131.36:0.0,0.0:0.0,0.000333998,0.999667	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.846:326.675,113.385:0.0,0.0:0.0,7.53837e-06,0.999994
-chr1	8675250	.	CACACACACACACACACA	CACACACACACA,CACACACACACACA	.	.	END=8675267;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.929463:6,7:6-6,6-10:23,14,0,2:5,2|6,16|7,3|9,2:4,1|7,1:266.324:366.612,131.36:0.0,1.13866:0.929583,0.0705108,5.71458e-32	0/0:29:0.69922:9,9:5-10,5-10:20,9,0,0:5,2|8,2|9,14|10,2:NULL:190.405:326.675,113.385:1.99244,1.99244:2.03531e-21,0.280196,0.719807
-chr1	8675272	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8675305;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.999897:14,14:14-14,14-14:22,16,0,4:13,2|14,20:6,1|7,1|8,1|13,1:274.611:366.612,131.36:0.0,0.0:1.0,7.88526e-07,0.0	0/0:29:0.907371:17,17:15-18,15-18:12,11,0,4:16,2|17,10:4,1|13,1|15,1|16,1:191.535:326.675,113.385:0.615775,0.615775:1.33605e-10,0.0899302,0.910167
-chr1	8675459	.	ACAGAAACACAGAAACACAGAAAC	.	.	.	END=8675482;RU=acagaaac;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999994:3,3:3-3,3-3:20,19,0,0:3,20:NULL:255.512:366.612,131.36:0.0,0.0:0.0,1.85232e-05,0.999985	0/0:25:0.999268:3,3:3-3,3-3:13,10,0,2:3,13:2,2:159.691:326.675,113.385:0.0,0.0:9.36e-43,0.000455439,0.999546
-chr1	8675986	.	ATTTATTTATTT	.	.	.	END=8675997;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:31,13,0,0:3,31:NULL:243.113:366.612,131.36:0.0,0.0:0.0,2.39922e-09,1.0	0/0:30:0.999964:3,3:3-3,3-3:18,12,0,0:3,18:NULL:186.787:326.675,113.385:0.0,0.0:0.0,2.80001e-05,0.999972
-chr1	8676389	.	AAAACAAAACAAAACAAAACAAAACAAAAC	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC,AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	.	.	END=8676418;RU=aaaac;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.960004:8,9:8-9,9-9:13,10,0,5:8,4|9,9:5,3|6,1|7,1:195.192:366.612,131.36:0.45695,0.0:0.0,4.26259e-06,0.999995	0/0:34:0.999914:6,6:6-6,6-6:17,9,0,8:6,17:3,3|4,2|5,3:213.522:326.675,113.385:0.0,0.0:5.66594e-34,3.7178e-05,0.999964
-chr1	8678460	.	TGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8678479;RU=tg;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:26:0.955016:17,18:13-17,13-18:7,10,0,6:17,5|18,2:6,1|8,2|15,1|16,2:180.984:366.612,131.36:1.33704,1.91348:0.0,0.0,1.0	0/0:14:0.896921:10,10:10-11,10-11:7,4,0,2:10,7:5,1|8,1:79.5285:326.675,113.385:0.475866,0.475866:1.70654e-11,0.0425545,0.957517
-chr1	8678493	.	TACATATATACATATATACATATA	.	.	.	END=8678516;RU=tacatata;PERIOD=8;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999933:3,3:3-3,3-3:17,10,0,0:3,17:NULL:163.081:366.612,131.36:0.0,0.0:0.0,5.9905e-05,0.999941	0/0:16:0.992139:3,3:3-3,3-3:10,4,0,2:3,10:2,2:88.166:326.675,113.385:0.0,0.0:2.3385e-30,0.00314205,0.996867
-chr1	8679768	.	ATAAAATAAAATAAA	.	.	.	END=8679782;RU=ataaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:3,3:3-3,3-3:20,22,0,2:3,20:2,2:296.659:366.612,131.36:0.0,0.0:0.0,3.54493e-06,1.0	0/0:32:1.0:3,3:3-3,3-3:24,8,0,0:3,24:NULL:167.886:326.675,113.385:0.0,0.0:0.0,3.57574e-07,1.0
-chr1	8681683	.	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	.	.	END=8681750;RU=aagg;PERIOD=4;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.280439:12,12:11-12,11-12:2,10,0,6:12,2:6,1|9,1|10,1|11,2|12,1:148.243:366.612,131.36:0.437216,0.437216:1.0,0.0,0.0	0/0:39:0.280034:17,17:13-17,13-17:2,17,0,19:17,2:2,1|4,1|5,2|6,2|7,3|8,1|10,3|12,1|13,3|15,2:298.812:326.675,113.385:1.83337,1.83337:2.37018e-05,0.427834,0.572237
-chr1	8682359	.	CACACACACACACACACACA	CACACACACACACACACACACA	.	.	END=8682378;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:32:0.691927:10,11:10-10,10-11:15,11,0,5:10,12|11,3:5,1|7,2|8,1|9,1:208.492:366.612,131.36:0.0,0.533001:1.26372e-21,5.01982e-05,0.999949	0/0:41:0.999694:10,10:10-11,10-11:15,17,0,8:10,15:6,2|7,1|8,1|9,3|10,1:286.511:326.675,113.385:0.169767,0.169767:4.6019e-29,8.81946e-05,0.999911
-chr1	8682430	.	CTCTCTCTCTCT	CTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8682441;RU=ct;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:1.0:5,5:5-5,5-5:20,10,0,0:5,20:NULL:171.799:366.612,131.36:0.0,0.0:0.999995,4.85419e-06,1.68552e-36	0/2:33:0.451644:6,13:6-6,5-13:14,17,0,2:5,2|6,12:5,1|13,1:252.805:326.675,113.385:0.0,3.78075:7.49433e-20,0.000777866,0.999226
-chr1	8682935	.	CACACACACACACACA	CACACACACACACA	.	.	END=8682950;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.152359:7,7:5-8,5-8:2,23,0,0:7,2:NULL:218.895:366.612,131.36:0.89526,0.89526:0.71237,0.287602,3.5247e-05	0/0:32:0.999976:8,8:8-8,8-8:18,12,0,2:8,18:4,1|6,1:195.974:326.675,113.385:0.0,0.0:1.15451e-31,2.82206e-05,0.999972
-chr1	8703164	.	GGCTCAGGGCTCAGGGCTCAG	.	.	.	END=8703184;RU=ggctcag;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:32,20,0,2:3,32:2,2:327.025:366.612,131.36:0.0,0.0:0.0,8.8737e-10,1.0	0/0:40:1.0:3,3:3-3,3-3:20,17,0,3:3,20:2,3:257.668:326.675,113.385:0.0,0.0:0.0,6.52146e-06,0.999994
-chr1	8704534	.	AACAAACAAACA	.	.	.	END=8704545;RU=aaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:211.86:366.612,131.36:0.0,0.0:0.0,2.13067e-07,1.0	0/0:36:1.0:3,3:3-3,3-3:28,8,0,0:3,28:NULL:181.495:326.675,113.385:0.0,0.0:0.0,2.64883e-08,1.0
-chr1	8705430	.	CAAACAAACAAA	.	.	.	END=8705441;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,11,0,2:3,22:2,2:208.072:366.612,131.36:0.0,0.0:0.0,1.44749e-06,1.0	0/0:29:0.999935:3,3:3-3,3-3:17,12,0,0:3,17:NULL:172.513:326.675,113.385:0.0,0.0:0.0,4.61238e-05,0.999956
-chr1	8707303	.	ATGATGATGATG	.	.	.	END=8707314;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:4,4:4-4,4-4:27,16,0,4:4,27:3,4:286.396:366.612,131.36:0.0,0.0:0.0,3.8379e-08,1.0	0/0:35:1.0:4,4:4-4,4-4:25,10,0,0:4,25:NULL:196.225:326.675,113.385:0.0,0.0:0.0,3.46047e-07,1.0
-chr1	8713399	.	AGCAGCAGCAGC	.	.	.	END=8713410;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:4,4:4-4,4-4:41,18,0,0:4,41:NULL:319.55:366.612,131.36:0.0,0.0:0.0,3.76502e-12,1.0	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:222.677:326.675,113.385:0.0,0.0:0.0,2.32344e-07,1.0
-chr1	8714830	.	CATAACATAACATAACATAACATAA	.	.	.	END=8714854;RU=cataa;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:5,5:4-5,4-5:22,17,0,4:5,22:2,2|3,2:270.52:366.612,131.36:0.195027,0.195027:0.0,2.05309e-06,1.0	0/0:21:0.942765:5,5:5-5,5-5:7,8,0,6:5,7:2,1|3,3|4,2:140.677:326.675,113.385:0.0,0.0:7.30822e-19,0.0268526,0.973201
-chr1	8723775	.	CACACACACACACA	CACACACACACACACACA	.	.	END=8723788;RU=ca;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:37:1.0:7,9:7-7,9-9:22,13,0,0:7,11|9,11:NULL:214.794:366.612,131.36:0.0,0.0:0.0,9.26156e-24,1.0	0/0:32:0.976786:7,7:6-7,6-7:20,12,0,0:6,2|7,18:NULL:198.465:326.675,113.385:0.44763,0.44763:9.9095e-36,0.0232696,0.976773
-chr1	8723801	.	GAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGA	.	.	END=8723818;RU=ga;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.989256:11,11:10-12,10-12:21,13,0,2:10,2|11,17|12,2:6,1|9,1:228.637:366.612,131.36:0.42884,0.42884:0.0,2.20501e-06,1.0	0/0:29:0.999479:9,9:9-9,9-9:15,14,0,0:9,15:NULL:187.994:326.675,113.385:0.0,0.0:3.7835e-27,0.000316983,0.999683
-chr1	8724576	.	AAAGAAAGAAAG	.	.	.	END=8724587;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,15,0,3:3,21:2,3:237.744:366.612,131.36:0.0,0.0:0.0,2.32757e-06,1.0	0/0:24:0.999755:3,3:3-3,3-3:15,7,0,2:3,15:2,2:134.146:326.675,113.385:0.0,0.0:0.0,9.06099e-05,0.999911
-chr1	8734504	.	ACACACACACAC	.	.	.	END=8734515;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:6,6:5-6,5-6:20,10,0,0:6,20:NULL:172.515:366.612,131.36:0.21692,0.21692:6.7e-44,1.11878e-05,0.999993	0/0:27:0.980354:6,6:5-7,5-7:19,5,0,2:5,2|6,17:4,1|5,1:149.183:326.675,113.385:0.503882,0.503882:8.75392e-34,0.0196928,0.980346
-chr1	8735119	.	CACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACA	.	.	END=8735148;RU=ca;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:32:0.378135:16,17:15-16,15-18:9,17,0,6:15,3|16,6:7,1|8,2|10,1|13,1|17,1:260.347:366.612,131.36:0.431574,1.08333:1.95696e-19,5.77162e-07,1.0	0/0:20:0.943262:15,15:14-15,14-15:12,4,0,4:14,2|15,10:5,2|10,1|12,1:123.677:326.675,113.385:0.298675,0.298675:5.12276e-12,0.0537033,0.946383
-chr1	8737285	.	AAACAAACAAAC	.	.	.	END=8737296;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:36,17,0,0:3,36:NULL:299.192:366.612,131.36:0.0,0.0:0.0,1.45837e-10,1.0	0/0:38:1.0:3,3:3-3,3-3:29,9,0,0:3,29:NULL:192.572:326.675,113.385:0.0,0.0:0.0,8.58223e-09,1.0
-chr1	8737336	.	ACAAAACAAAACAAAACAAAACAAAACAAA	ACAAAACAAAACAAAACAAA	.	.	END=8737365;RU=acaaa;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.999942:4,4:4-4,4-4:16,23,0,4:4,16:2,2|3,2:303.954:366.612,131.36:0.0,0.0:0.999987,1.18551e-05,0.0	0/0:28:0.993833:6,6:6-6,6-6:10,13,0,5:6,10:3,1|4,1|5,3:191.525:326.675,113.385:0.0,0.0:3.38817e-33,0.00281481,0.997193
-chr1	8737581	.	AAAACAAAACAAAACAAAAC	.	.	.	END=8737600;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:4,4:3-4,3-4:22,16,0,2:4,22:3,2:264.311:366.612,131.36:0.311527,0.311527:0.0,3.04094e-06,1.0	0/0:18:0.995904:4,4:4-4,4-4:11,4,0,3:4,11:3,3:102.332:326.675,113.385:0.0,0.0:8.70255e-37,0.00136317,0.998641
-chr1	8743177	.	TATATATATATATA	TATATATATA	.	.	END=8743190;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.867895:5,5:5-5,5-5:6,13,0,0:5,6:NULL:145.689:366.612,131.36:0.0,0.0:0.977026,0.0230208,1.56871e-16	0/0:14:0.889317:7,7:6-8,6-8:7,5,0,0:7,7:NULL:73.888:326.675,113.385:0.608246,0.608246:3.74191e-10,0.065115,0.934977
-chr1	8743192	.	TTGTTGTTGTTGTTG	TTGTTGTTGTTG	.	.	END=8743206;RU=ttg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.110593:4,4:4-5,4-5:0,13,0,2:NULL:4,2:136.973:366.612,131.36:0.489874,0.489874:0.214803,0.531368,0.253882	0/0:21:0.995999:5,5:5-5,5-5:11,8,0,2:5,11:3,1|4,1:129.239:326.675,113.385:0.0,0.0:1.82559e-33,0.00187478,0.998132
-chr1	8747307	.	CTTTCTTTCTTT	.	.	.	END=8747318;RU=cttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.997834:3,3:3-3,3-3:12,4,0,0:3,12:NULL:83.5965:366.612,131.36:0.0,0.0:8.14254e-35,0.000934292,0.999067	0/0:19:0.998932:3,3:3-3,3-3:13,6,0,0:3,13:NULL:103.89:326.675,113.385:0.0,0.0:9.97061e-38,0.00050504,0.999499
-chr1	8747937	.	TTTATTTATTTA	.	.	.	END=8747948;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999946:3,3:3-3,3-3:17,6,0,0:3,17:NULL:123.806:366.612,131.36:0.0,0.0:0.0,2.47065e-05,0.999978	0/0:13:0.98465:3,3:3-3,3-3:9,4,0,0:3,9:NULL:73.8153:326.675,113.385:0.0,0.0:7.94114e-30,0.00766915,0.992348
-chr1	8748060	.	TTTTGTTTTGTTTTG	TTTTGTTTTG	.	.	END=8748074;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.080817:2,2:1-4,1-4:0,10,0,0:NULL:NULL:90.1502:366.612,131.36:0.699686,0.699686:0.285972,0.507413,0.206621	0/0:15:0.990939:3,3:3-3,3-3:10,5,0,0:3,10:NULL:87.1438:326.675,113.385:0.0,0.0:2.88402e-32,0.00531553,0.9947
-chr1	8750524	.	TCTCTCTCTCTC	TCTCTCTC	.	.	END=8750535;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:28:1.0:4,6:4-6,6-6:18,10,0,0:4,5|6,13:NULL:181.687:366.612,131.36:0.647134,0.0:4.78554e-25,1.0,1.79426e-07	0/0:19:0.997357:6,6:6-6,6-6:12,5,0,2:6,12:4,2:114.706:326.675,113.385:0.0,0.0:1.90457e-24,0.00151952,0.998488
-chr1	8750590	.	TCTCTCTCTC	.	.	.	END=8750599;RU=tc;PERIOD=2;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.958213:5,5:5-5,5-5:8,12,0,0:5,8:NULL:147.136:366.612,131.36:0.0990099,0.0990099:7.00962e-20,0.0238383,0.976206	0/0:17:0.989181:5,5:5-13,5-13:11,5,0,0:5,11:NULL:93.3733:326.675,113.385:3.99824,3.99824:3.62781e-27,0.00379959,0.99621
-chr1	8753159	.	AGAGAGAGAGAG	.	.	.	END=8753170;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999384:6,6:6-6,6-6:14,15,0,0:6,14:NULL:194.554:366.612,131.36:0.0,0.0:2.70498e-32,0.000309613,0.999691	0/0:34:0.999963:6,6:6-6,6-6:17,14,0,3:6,17:4,1|5,2:225.969:326.675,113.385:0.0,0.0:4.18258e-39,1.76549e-05,0.999986
-chr1	8754911	.	TTTGTTTGTTTG	.	.	.	END=8754922;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.992501:3,3:3-3,3-3:10,5,0,0:3,10:NULL:85.1877:366.612,131.36:0.0,0.0:1.03384e-34,0.00308253,0.996927	0/0:22:0.997164:3,3:3-4,3-4:12,9,0,0:3,12:NULL:132.107:326.675,113.385:0.475866,0.475866:1.13921e-40,0.00179077,0.998216
-chr1	8758313	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=8758332;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.994917:5,5:5-5,5-5:11,12,0,4:5,11:3,3|4,1:184.025:366.612,131.36:0.0,0.0:5.55056e-32,0.00249623,0.997511	0/0:27:0.999632:5,5:5-5,5-5:14,10,0,3:5,14:3,2|4,1:170.794:326.675,113.385:0.0,0.0:7.5234e-41,0.000212208,0.999789
-chr1	8759459	.	TATTTATTTATT	.	.	.	END=8759470;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:3,3:3-3,3-3:19,5,0,0:3,19:NULL:123.917:366.612,131.36:0.0,0.0:0.0,8.85738e-06,0.999994	0/0:23:0.999922:3,3:3-3,3-3:17,6,0,0:3,17:NULL:121.223:326.675,113.385:0.0,0.0:0.0,4.54659e-05,0.999956
-chr1	8765668	.	AATAAATAAATA	.	.	.	END=8765679;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.985827:3,3:3-3,3-3:9,16,0,0:3,9:NULL:194.591:366.612,131.36:0.0,0.0:7.47013e-30,0.0105569,0.989469	0/0:13:0.959532:3,3:3-3,3-3:8,5,0,0:3,8:NULL:77.3003:326.675,113.385:0.0,0.0:1.84624e-26,0.0212171,0.978826
-chr1	8771953	.	AGGAAAGGAAAGGAA	.	.	.	END=8771967;RU=aggaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999873:3,3:3-3,3-3:16,8,0,0:3,16:NULL:132.728:366.612,131.36:0.0,0.0:0.0,7.98286e-05,0.999924	0/0:26:0.999792:3,3:3-3,3-3:16,10,0,0:3,16:NULL:153.516:326.675,113.385:0.0,0.0:0.0,0.000158064,0.999843
-chr1	8778970	.	TTTCTTTCTTTC	.	.	.	END=8778981;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999944:3,3:3-3,3-3:17,14,0,2:3,17:2,2:215.313:366.612,131.36:0.0,0.0:0.0,2.12768e-05,0.999979	0/0:31:1.0:3,3:3-3,3-3:19,10,0,2:3,19:2,2:175.96:326.675,113.385:0.0,0.0:0.0,6.06985e-06,0.999994
-chr1	8783282	.	ATATATATATATAT	ATATATATATATATATAT	.	.	END=8783295;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.997796:9,9:8-9,8-9:13,13,0,0:9,13:NULL:170.275:366.612,131.36:0.222277,0.222277:1.11918e-35,0.00061759,0.999385	0/0:13:0.49888:7,7:6-7,6-7:10,3,0,0:6,2|7,8:NULL:75.1751:326.675,113.385:0.486863,0.486863:9.80189e-09,0.497037,0.502977
-chr1	8784610	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC	.	.	END=8784647;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.644557:11,11:10-12,10-12:14,13,0,0:10,2|11,10|12,2:NULL:188.579:366.612,131.36:0.536667,0.536667:1.0,0.0,0.0	0/0:24:0.971893:19,19:17-19,17-19:9,6,0,7:19,9:7,1|11,2|13,1|17,2|18,1:148.768:326.675,113.385:0.634591,0.634591:7.52986e-13,0.0110308,0.988993
-chr1	8784672	.	AAAACAAAACAAAAC	.	.	.	END=8784686;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999716:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.975:366.612,131.36:0.0,0.0:0.0,0.000161651,0.999841	0/0:22:0.998793:3,3:3-3,3-3:13,9,0,0:3,13:NULL:133.991:326.675,113.385:0.0,0.0:1e-44,0.000765121,0.99924
-chr1	8785066	.	TAAATAAATAAA	.	.	.	END=8785077;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999868:3,3:3-3,3-3:16,13,0,2:3,16:2,2:195.894:366.612,131.36:0.0,0.0:0.0,6.85765e-05,0.999933	0/0:22:0.999799:3,3:3-3,3-3:16,6,0,0:3,16:NULL:123.274:326.675,113.385:0.0,0.0:0.0,0.000122937,0.999879
-chr1	8786909	.	CTCTTGCTCTTGCTCTTGCTCTTG	.	.	.	END=8786932;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998181:4,4:4-4,4-4:12,14,0,2:4,12:3,2:192.038:366.612,131.36:0.0,0.0:4.48662e-35,0.0012672,0.998739	0/0:32:0.998131:4,4:4-4,4-4:12,17,0,3:4,12:3,3:221.197:326.675,113.385:0.0,0.0:8.55373e-35,0.00145832,0.998549
-chr1	8790230	.	CTCTTGCTCTTGCTCTTGCTCTTG	CTCTTGCTCTTGCTCTTGCTCTTGCTCTTG	.	.	END=8790253;RU=ctcttg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999955:5,5:4-5,4-5:18,17,0,5:5,18:2,1|3,1|4,3:261.763:366.612,131.36:0.169767,0.169767:0.0,1.11323e-05,0.999993	0/0:22:0.985433:4,4:4-4,4-4:9,11,0,2:4,9:3,2:153.147:326.675,113.385:0.0,0.0:4.64383e-30,0.00909807,0.990925
-chr1	8794964	.	ATATATATATATATATATATATAT	ATATATATATATAT,ATATATATATATATATATATAT	.	.	END=8794987;RU=at;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:1.00001:7,7:7-7,7-7:22,5,0,0:7,22:NULL:135.279:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/0:11:0.932931:11,12:11-12,11-12:6,5,0,0:11,2|12,4:NULL:74.3812:326.675,113.385:0.484441,0.21692:0.00011127,0.943244,0.0567284
-chr1	8796394	.	ATTTATTTATTT	ATTT	.	.	END=8796405;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.0726585:1,1:1-1,1-1:0,14,0,0:NULL:NULL:121.378:366.612,131.36:0.0,0.0:0.142909,0.492976,0.364275	0/0:20:0.998744:3,3:3-3,3-3:13,7,0,0:3,13:NULL:116.182:326.675,113.385:0.0,0.0:1.53173e-38,0.000632784,0.99937
-chr1	8798684	.	AGCAGCAGCAGC	AGC	.	.	END=8798695;RU=agc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.0214006:1,1:1-4,1-4:0,1,0,0:NULL:NULL:8.21738:366.612,131.36:1.29472,1.29472:0.184075,0.489982,0.326062	0/0:37:1.0:4,4:4-4,4-4:21,16,0,0:4,21:NULL:226.317:326.675,113.385:0.0,0.0:0.0,5.43975e-06,0.999995
-chr1	8800250	.	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	AGGA	.	.	END=8800297;RU=agga;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.139509:1,1:1-1,1-1:0,19,0,0:NULL:NULL:173.395:366.612,131.36:0.0,0.0:0.936995,0.0627439,0.000350964	0/0:22:0.594842:12,12:12-12,12-12:4,8,0,10:12,4:2,1|4,2|6,1|7,2|8,1|9,2|11,1:162.595:326.675,113.385:0.0990099,0.0990099:1.58453e-08,0.225544,0.774489
-chr1	8800676	.	TAAATAAATAAA	.	.	.	END=8800687;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999959:3,3:3-3,3-3:18,10,0,0:3,18:NULL:167.07:366.612,131.36:0.0,0.0:0.0,2.59607e-05,0.999978	0/0:20:0.99217:3,3:3-3,3-3:10,8,0,2:3,10:2,2:128.633:326.675,113.385:0.0,0.0:5.11394e-33,0.00312934,0.996881
-chr1	8800714	.	AACAACAACAAC	.	.	.	END=8800725;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.987725:4,4:4-4,4-4:11,14,0,0:4,11:NULL:174.339:366.612,131.36:0.0,0.0:2.62346e-30,0.00853959,0.991479	0/0:21:0.992712:4,4:4-4,4-4:11,10,0,0:4,11:NULL:135.379:326.675,113.385:0.0,0.0:6.64144e-31,0.00496701,0.995047
-chr1	8805447	.	GGGGGAGGGGGAGGGGGA	GGGGGA	.	.	END=8805464;RU=ggggga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.109134:1,1:1-2,1-2:0,16,0,0:NULL:NULL:147.015:366.612,131.36:0.38244,0.38244:0.332073,0.509501,0.15845	0/0:20:0.990143:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.811:326.675,113.385:0.0,0.0:1.04539e-30,0.00676799,0.993249
-chr1	8807437	.	TTTGTTTGTTTG	.	.	.	END=8807448;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:3,3:3-3,3-3:19,12,0,0:3,19:NULL:182.822:366.612,131.36:0.0,0.0:0.0,8.47762e-06,0.999994	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:195.556:326.675,113.385:0.0,0.0:0.0,1.13934e-06,1.0
-chr1	8810096	.	TAAATAAATAAA	.	.	.	END=8810107;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.990155:3,3:3-3,3-3:10,7,0,0:3,10:NULL:106.147:366.612,131.36:0.0,0.0:1.39982e-33,0.00538124,0.994632	0/0:25:0.999928:3,3:3-3,3-3:17,8,0,0:3,17:NULL:141.067:326.675,113.385:0.0,0.0:0.0,3.91424e-05,0.999963
-chr1	8810477	.	TTTGTTTTTGTTTTTGTT	.	.	.	END=8810494;RU=tttgtt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:21,20,0,0:3,21:NULL:267.378:366.612,131.36:0.0,0.0:0.0,2.79993e-06,1.0	0/0:30:0.999814:3,3:3-3,3-3:15,12,0,3:3,15:2,3:192.709:326.675,113.385:0.0,0.0:0.0,9.18495e-05,0.99991
-chr1	8814191	.	TGTGTGTGTGTGTGTGTG	.	.	.	END=8814208;RU=tg;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999651:9,9:8-9,8-9:21,14,0,5:8,2|9,19:4,1|6,1|7,2|8,1:257.454:366.612,131.36:0.169767,0.169767:1.22881e-31,0.000361579,0.999643	0/0:26:0.966826:9,9:8-10,8-10:17,3,0,5:8,3|9,14:4,1|7,1|8,2|9,1:142.198:326.675,113.385:0.461008,0.461008:3.05001e-29,0.0331402,0.966922
-chr1	8815663	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8815726;RU=tc;PERIOD=2;REF=32.0;EXPTHRESH=32	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:19:0.0165681:30,46:16-31,16-49:0,10,0,7:NULL:13,2|15,1|18,1|30,2|46,1:150.577:366.612,131.36:7.66383,14.7344:8.05921e-08,0.577402,0.422683	1/1:17:0.0181341:28,28:28-32,28-32:0,8,0,7:NULL:4,1|8,1|9,1|11,1|21,1|22,1|26,1:128.18:326.675,113.385:1.25387,1.25387:0.387564,0.473392,0.139121
-chr1	8816641	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=8816672;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.96131:13,13:13-13,13-13:9,14,0,0:13,9:NULL:162.474:366.612,131.36:0.139319,0.139319:0.997654,0.00235383,2.07518e-22	0/0:23:0.80832:16,16:15-16,15-16:10,9,0,4:15,2|16,8:8,1|12,1|15,2:161.939:326.675,113.385:0.390807,0.390807:1.74484e-09,0.183516,0.816552
-chr1	8817844	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8817913;RU=tc;PERIOD=2;REF=35.0;EXPTHRESH=35	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.150498:11,11:11-18,11-18:23,11,0,5:11,23:6,1|7,2|10,1|16,1:257.355:366.612,131.36:2.58994,2.58994:1.0,0.0,0.0	2/2:19:0.011417:34,34:9-34,9-34:0,11,0,8:NULL:9,2|11,1|18,1|21,1|23,1|29,1|33,1:161.9:326.675,113.385:9.00396,9.00396:0.497947,0.47067,0.0314397
-chr1	8819083	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8819132;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:44:0.78078:27,28:26-27,26-28:7,28,0,9:26,3|27,4:5,2|11,1|12,1|18,1|20,1|23,1|26,1|28,1:373.218:366.612,131.36:0.398507,0.7392:2.9394e-26,7.47407e-05,0.999926	1/1:26:0.153341:26,26:24-26,24-26:2,12,0,10:26,2:5,2|6,2|8,1|10,1|16,1|17,1|19,1|23,1:201.787:326.675,113.385:0.915079,0.915079:0.000331256,0.3795,0.620228
-chr1	8820361	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8820396;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:29:0.301035:25,29:25-25,25-29:5,14,0,10:25,5:4,1|6,1|8,1|12,1|13,2|17,1|18,1|23,1|27,1:236.256:366.612,131.36:0.0,1.69778:0.0,0.0,1.0	0/1:29:0.294315:18,23:18-19,16-23:9,9,0,9:18,7|19,2:5,2|6,1|8,1|9,2|13,1|14,1|23,1:201.422:326.675,113.385:0.236383,2.38098:3.51614e-15,2.22824e-07,1.0
-chr1	8823929	.	TGGGTGGGTGGG	.	.	.	END=8823940;RU=tggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:3,3:3-3,3-3:30,22,0,4:3,30:2,4:347.42:366.612,131.36:0.0,0.0:0.0,4.20299e-09,1.0	0/0:30:0.99987:3,3:3-3,3-3:15,12,0,3:3,15:2,3:186.501:326.675,113.385:0.0,0.0:0.0,6.40528e-05,0.99994
-chr1	8824054	.	ATTTATTTATTT	.	.	.	END=8824065;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:259.214:366.612,131.36:0.0,0.0:0.0,2.92656e-07,1.0	0/0:40:1.0:3,3:3-3,3-3:30,8,0,2:3,30:2,2:203.191:326.675,113.385:0.0,0.0:0.0,2.58817e-09,1.0
-chr1	8827247	.	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTGTTGTTGTTG	.	.	END=8827291;RU=ttg;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:56:1.00001:10,10:8-10,8-10:21,24,0,10:10,21:4,2|5,1|7,2|8,1|9,4:383.611:366.612,131.36:0.339533,0.339533:1.0,0.0,0.0	0/0:47:0.999999:15,15:15-15,15-15:19,13,0,15:15,19:3,2|4,1|5,1|6,1|7,2|9,1|10,1|11,1|12,1|13,1|14,3:312.501:326.675,113.385:0.0,0.0:1.25107e-38,7.04996e-06,0.999994
-chr1	8833833	.	ACCACCACCACCACCACC	.	.	.	END=8833850;RU=acc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:74:1.0:6,6:6-6,6-6:34,33,0,7:6,34:3,1|4,3|5,3:485.676:366.612,131.36:0.0,0.0:0.0,1.99673e-10,1.0	0/0:47:1.0:6,6:6-6,6-6:28,11,0,8:6,28:3,1|4,3|5,4:273.788:326.675,113.385:0.0,0.0:0.0,1.24028e-08,1.0
-chr1	8834106	.	AAAGAAAGAAAG	.	.	.	END=8834117;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:28,25,0,0:3,28:NULL:342.64:366.612,131.36:0.0,0.0:0.0,1.26556e-07,1.0	0/0:34:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:202.146:326.675,113.385:0.0,0.0:0.0,3.19142e-06,1.0
-chr1	8835404	.	ACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=8835449;RU=ac;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:51:0.360317:19,23:19-19,18-23:15,26,0,9:18,3|19,12:4,1|5,1|7,1|8,1|9,1|12,1|13,1|17,1|23,1:389.399:366.612,131.36:0.0,2.07647:0.000589075,0.999415,9.12762e-34	2/0:42:0.679654:22,23:22-23,23-23:17,12,0,13:22,7|23,10:5,2|6,1|7,2|8,1|9,1|17,2|20,1|21,1|22,2:298.777:326.675,113.385:0.495841,0.0:9.49549e-09,0.679662,0.320347
-chr1	8837723	.	AATAAATAAATAAATA	AATA	.	.	END=8837738;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.31628:1,1:1-2,1-2:0,28,0,0:NULL:NULL:273.351:366.612,131.36:0.195027,0.195027:0.705939,0.277012,0.0170776	0/0:21:0.999735:4,4:4-4,4-4:15,4,0,2:4,15:2,1|3,1:108.529:326.675,113.385:0.0,0.0:1e-45,0.000120001,0.99988
-chr1	8840838	.	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	.	.	END=8840876;RU=ctt;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:27:0.974815:12,13:12-13,13-13:13,8,0,6:12,3|13,10:4,2|7,1|9,1|10,1|11,1:181.955:366.612,131.36:0.489073,0.0:6.14641e-24,0.974835,0.0252135	0/0:37:0.997373:13,13:13-13,13-13:12,17,0,8:13,12:4,1|6,1|8,1|9,3|10,1|11,1:258.066:326.675,113.385:0.0,0.0:6.14404e-33,0.00142455,0.99858
-chr1	8848162	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8848191;RU=ag;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:2:0.0236259:14,14:14-17,14-17:0,1,0,0:NULL:NULL:9.91206:366.612,131.36:1.32769,1.32769:0.0236151,0.261023,0.715409	0/0:24:0.991418:15,15:13-16,13-16:11,4,0,6:15,11:5,1|6,2|10,1|14,2:136.868:326.675,113.385:0.489474,0.489474:2.55922e-15,0.00317791,0.99683
-chr1	8848195	.	GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	GAA,GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA,GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	.	.	END=8848293;RU=gaa;PERIOD=3;REF=33.0;EXPTHRESH=33	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:2:0.000598994:1,59:1-59,1-59:0,2,0,0:NULL:NULL:18.9572:366.612,131.36:24.6864,23.1134:0.10077,0.561584,0.337791	2/2:23:0.322535:32,32:30-34,30-34:2,9,0,12:32,2:4,1|11,1|12,1|19,1|20,1|21,1|22,1|24,1|28,1|30,1|31,1|32,1:189.229:326.675,113.385:0.626507,0.626507:0.539029,0.458295,0.00279247
-chr1	8848386	.	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	GGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAA	.	.	END=8848480;RU=gggaa;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.0376241:12,12:7-12,7-12:0,1,0,5:NULL:4,1|5,1|7,1|10,1|11,1:45.0742:366.612,131.36:1.23203,1.23203:1.0,0.0,0.0	0/0:25:0.460313:19,19:18-19,18-19:3,9,0,13:19,3:3,1|5,1|8,1|10,1|11,1|13,1|15,1|17,1|18,5:193.919:326.675,113.385:0.284901,0.284901:1.42522e-06,0.210658,0.789391
-chr1	8850301	.	CATACATACATA	.	.	.	END=8850312;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,9,0,2:3,24:2,2:189.048:366.612,131.36:0.0,0.0:0.0,1.75028e-07,1.0	0/0:25:1.00001:3,3:3-3,3-3:20,3,0,2:3,20:2,2:124.456:326.675,113.385:0.0,0.0:0.0,3.10488e-06,1.0
-chr1	8851721	.	AGAAAGAAAGAAAGAAAGAAAGAA	AGAAAGAAAGAAAGAA	.	.	END=8851744;RU=agaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:35:1.0:4,6:4-6,6-6:12,23,0,0:4,4|6,8:NULL:259.097:366.612,131.36:0.339533,0.0:1.20748e-15,1.0,2.89637e-09	0/0:40:0.995531:6,6:5-6,5-6:11,23,0,5:6,11:2,1|4,1|5,3:285.933:326.675,113.385:0.425627,0.425627:3.18763e-21,0.00288447,0.997124
-chr1	8852685	.	GGGTGGGTGGGT	.	.	.	END=8852696;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.350289:3,3:1-3,1-3:2,25,0,0:3,2:NULL:230.69:366.612,131.36:0.687673,0.687673:8.77469e-07,0.40522,0.594852	0/0:28:0.928769:3,3:3-3,3-3:7,21,0,0:3,7:NULL:222.275:326.675,113.385:0.19802,0.19802:3.35873e-21,0.043614,0.956457
-chr1	8856513	.	TATATATATATA	TATATATATA	.	.	END=8856524;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:36:0.971816:5,6:4-6,6-6:18,18,0,0:4,3|5,5|6,10:NULL:253.14:366.612,131.36:0.613062,0.0:3.13099e-10,0.984218,0.0158172	0/0:17:0.891103:6,6:5-6,5-6:14,3,0,0:5,3|6,11:NULL:92.127:326.675,113.385:0.36513,0.36513:2.12696e-13,0.10786,0.892238
-chr1	8857202	.	GAGAGAGAGAGA	GAGAGAGAGA	.	.	END=8857213;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:1.00001:5,5:5-5,5-5:23,24,0,2:5,23:4,2:322.378:366.612,131.36:0.0,0.0:1.0,7.08375e-07,0.0	0/0:25:0.999129:6,6:5-6,5-6:13,8,0,3:6,13:5,3:149.8:326.675,113.385:0.419363,0.419363:1.06978e-35,0.000363674,0.999637
-chr1	8860742	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8860779;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.940994:20,20:19-20,19-20:8,23,0,13:20,8:5,2|8,1|10,1|11,1|13,1|14,2|15,1|16,2|17,1|19,1:351.72:366.612,131.36:0.323567,0.323567:2.8294e-23,0.0144076,0.985623	0/1:30:0.996848:19,20:18-19,18-20:11,5,0,14:18,2|19,6|20,3:4,1|5,2|6,2|7,1|9,1|10,2|13,2|14,1|20,2:219.945:326.675,113.385:0.323567,0.363786:2.20948e-23,0.000960826,0.999043
-chr1	8863873	.	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG,CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG,CTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTGCTGCCTG	.	.	END=8863991;RU=ctgcctg;PERIOD=7;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:59:0.924128:13,20:10-16,15-23:2,23,1,29:13,2:2,1|5,1|6,2|7,2|8,3|9,6|10,4|11,1|13,4|14,2|15,3:459.505:366.612,131.36:1.67955,2.60763:0.0,1.0,7.78635e-10	2/2:50:0.179105:16,16:14-16,14-16:0,18,0,32:NULL:2,1|3,4|4,1|6,3|7,1|8,5|9,2|10,2|11,4|13,4|14,1|15,2|16,2:378.902:326.675,113.385:0.607763,0.607763:0.385714,0.501196,0.113186
-chr1	8865199	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8865252;RU=tc;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.483501:22,24:22-27,23-27:7,21,0,13:22,3|23,2|24,2:4,1|5,1|6,1|7,2|8,1|9,1|11,2|13,1|14,1|22,1|23,1:336.074:366.612,131.36:1.62732,1.37962:0.997519,0.00248811,6.59812e-10	3/0:39:0.968546:26,27:5-27,5-27:19,8,0,9:25,4|26,6|27,9:5,2|6,1|8,1|12,1|15,1|16,1|22,1|26,1:251.944:326.675,113.385:9.18917,7.11396:2.393e-07,0.974888,0.0251617
-chr1	8865253	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=8865286;RU=tg;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:30:0.831195:15,17:12-15,12-17:9,17,0,4:12,2|14,2|15,3|17,2:11,1|12,2|13,1:243.725:366.612,131.36:1.06407,1.95794:0.10753,0.892336,0.000235103	0/2:25:0.353293:17,18:17-17,17-18:11,8,0,5:17,11:15,4|18,1:170.877:326.675,113.385:0.0,0.537032:1.58965e-25,3.94925e-08,1.0
-chr1	8865886	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=8865933;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.483152:24,24:24-26,24-26:4,13,0,9:24,4:7,1|9,2|14,1|15,1|16,1|20,1|24,2:211.934:366.612,131.36:0.744223,0.744223:1.16041e-19,0.0937735,0.906328	0/0:39:0.590958:24,24:24-25,24-25:16,11,0,12:24,13|25,3:5,1|7,2|12,1|13,3|15,1|17,1|19,1|21,1|23,1:275.553:326.675,113.385:0.481803,0.481803:4.06428e-17,0.000140235,0.999864
-chr1	8866609	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=8866646;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.944924:20,20:19-24,19-24:15,14,0,17:19,3|20,12:5,1|6,1|8,1|9,2|10,1|11,2|12,1|14,2|15,1|16,2|17,2|19,1:331.989:366.612,131.36:1.62895,1.62895:8.41321e-30,0.000257595,0.999743	0/1:53:0.898856:19,20:19-19,19-20:19,17,0,16:18,2|19,17:5,2|6,1|9,1|10,1|11,2|12,2|14,2|15,4|20,1:390.696:326.675,113.385:0.0,0.472558:6.33979e-22,2.9656e-07,1.0
-chr1	8868138	.	CAAACCAAACCAAAC	.	.	.	END=8868152;RU=caaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:23,10,0,2:3,23:2,2:199.603:366.612,131.36:0.0,0.0:0.0,5.30068e-07,1.0	0/0:50:1.0:3,3:3-3,3-3:28,22,0,0:3,28:NULL:315.714:326.675,113.385:0.0,0.0:0.0,4.2339e-08,1.0
-chr1	8869124	.	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=8869175;RU=at;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0181264:22,22:23-26,23-26:0,4,0,0:NULL:NULL:37.1521:366.612,131.36:0.783868,0.783868:0.46442,0.437085,0.0986378	2/2:3:0.029014:23,23:23-26,23-26:0,2,0,0:NULL:NULL:22.634:326.675,113.385:1.2356,1.2356:0.258741,0.506922,0.23435
-chr1	8870489	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG,AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=8870542;RU=ag;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.492783:22,22:19-22,19-22:4,18,0,12:22,4:5,1|9,3|10,2|12,1|19,1|20,1|21,3:273.202:366.612,131.36:1.40196,1.40196:1.0,0.0,0.0	0/2:27:0.229769:27,39:25-27,26-41:5,8,0,13:26,3|27,2:5,2|6,1|11,1|14,1|18,1|19,2|21,1|22,2|23,1|39,1:209.587:326.675,113.385:1.34486,6.22146:1.87855e-07,0.175017,0.825054
-chr1	8870819	.	TTTTATTTTATTTTA	.	.	.	END=8870833;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:25,12,0,0:3,25:NULL:209.892:366.612,131.36:0.0,0.0:0.0,1.69948e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:30,7,0,0:3,30:NULL:183.953:326.675,113.385:0.0,0.0:0.0,4.23064e-09,1.0
-chr1	8881143	.	AAATAAATAAAT	.	.	.	END=8881154;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999663:3,3:3-3,3-3:15,16,0,0:3,15:NULL:202.324:366.612,131.36:0.0,0.0:0.0,0.000200851,0.999803	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:159.894:326.675,113.385:0.0,0.0:0.0,6.30973e-07,1.0
-chr1	8891081	.	CATGCATGCATG	.	.	.	END=8891092;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:15:0.965842:3,3:3-3,3-3:8,7,0,0:3,8:NULL:95.5284:366.612,131.36:0.0,0.0:6.51114e-17,0.0148534,0.985179	0/0:21:0.999769:3,3:3-3,3-3:15,6,0,0:3,15:NULL:121.647:326.675,113.385:0.0,0.0:3.8172e-31,0.000124544,0.999879
-chr1	8894445	.	TTTGTTTGTTTG	.	.	.	END=8894456;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999531:3,3:3-3,3-3:14,9,0,0:3,14:NULL:139.193:366.612,131.36:0.0,0.0:0.0,0.000248745,0.999751	0/0:25:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:123.879:326.675,113.385:0.0,0.0:0.0,3.92141e-06,0.999995
-chr1	8896564	.	TCTTTCTTTCTT	.	.	.	END=8896575;RU=tctt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.99997:3,3:3-3,3-3:18,9,0,0:3,18:NULL:151.099:366.612,131.36:0.0,0.0:0.0,2.52087e-05,0.999978	0/0:37:1.0:3,3:3-3,3-3:26,9,0,2:3,26:2,2:200.704:326.675,113.385:0.0,0.0:0.0,3.85101e-08,1.0
-chr1	8896983	.	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTT	TTTGTTTTTGTTTTTGTTTTTGTT	.	.	END=8897012;RU=tttgtt;PERIOD=6;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.993442:4,4:4-4,4-4:11,9,0,2:4,11:2,1|3,1:142.233:366.612,131.36:0.0,0.0:0.997042,0.00296483,4.66393e-27	0/0:43:0.999962:5,5:5-5,5-5:17,20,0,6:5,17:2,3|3,1|4,2:291.268:326.675,113.385:0.0,0.0:1e-45,4.48778e-05,0.999956
-chr1	8902045	.	TCTCCTCTCCTCTCCTCTCC	.	.	.	END=8902064;RU=tctcc;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:4,4:4-4,4-4:26,18,0,2:4,26:2,1|3,1:285.964:366.612,131.36:0.0,0.0:0.0,1.81415e-07,1.0	0/0:35:1.0:4,4:4-4,4-4:25,6,0,4:4,25:3,4:184.34:326.675,113.385:0.0,0.0:0.0,7.11103e-08,1.0
-chr1	8903368	.	TAAATAAATAAA	.	.	.	END=8903379;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999985:3,3:3-3,3-3:18,13,0,0:3,18:NULL:189.562:366.612,131.36:0.0,0.0:0.0,2.00924e-05,0.99998	0/0:24:0.999722:3,3:3-3,3-3:15,9,0,0:3,15:NULL:139.598:326.675,113.385:0.0,0.0:0.0,0.000152183,0.999849
-chr1	8905683	.	TCTCTCTCTCTC	.	.	.	END=8905694;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999972:6,6:6-6,6-6:18,8,0,0:6,18:NULL:146.342:366.612,131.36:0.0,0.0:1.2e-43,1.97853e-05,0.99998	0/0:38:1.00001:6,6:6-6,6-6:22,16,0,0:6,22:NULL:232.951:326.675,113.385:0.0,0.0:0.0,1.45279e-06,1.0
-chr1	8907395	.	CACACACACACA	.	.	.	END=8907406;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:6,6:6-6,6-6:29,28,0,3:6,29:5,3:384.25:366.612,131.36:0.0,0.0:0.0,7.76301e-09,1.0	0/0:23:0.995262:6,6:6-6,6-6:11,12,0,0:6,11:NULL:159.469:326.675,113.385:0.0,0.0:9.17521e-26,0.00274876,0.99726
-chr1	8909209	.	TATACATATACATATACATATACATATACATATACATATACATATACA	TATACATATACATATACATATACATATACA,TATACATATACATATACATATACATATACATATACATATACA	.	.	END=8909256;RU=tataca;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.70847:5,7:5-7,7-7:13,9,0,6:5,2|7,11:4,2|5,1|6,3:187.788:366.612,131.36:0.996022,0.0:0.999782,0.000218416,2.55627e-25	0/0:19:0.868755:8,8:8-11,8-11:7,8,0,3:8,7:3,2|6,1:123.592:326.675,113.385:1.47322,1.47322:1.3311e-16,0.0746377,0.925456
-chr1	8909266	.	AGAGAGAGAGAGAG	.	.	.	END=8909279;RU=ag;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999991:7,7:7-7,7-7:19,5,0,0:7,19:NULL:121.83:366.612,131.36:0.0,0.0:3.2e-44,1.76356e-05,0.999986	0/0:16:0.865302:7,7:7-7,7-7:7,9,0,0:7,7:NULL:109.484:326.675,113.385:0.0,0.0:1.3106e-16,0.077319,0.922778
-chr1	8909506	.	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA,CATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCTA	.	.	END=8909589;RU=catcta;PERIOD=6;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.398597:13,15:13-13,13-16:8,15,0,22:13,8:3,5|4,2|5,2|6,2|7,3|8,1|10,3|12,3|15,1:332.842:366.612,131.36:0.0,1.12637:1.09292e-06,1.0,6.81827e-15	0/0:34:0.83448:14,14:14-14,14-14:5,10,0,19:14,5:3,2|5,3|6,1|7,1|8,2|9,1|11,1|12,3|13,5:241.438:326.675,113.385:0.0990099,0.0990099:2.26933e-10,0.0688562,0.931239
-chr1	8912340	.	ATTTATTTATTT	.	.	.	END=8912351;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.99996:3,3:3-3,3-3:17,21,0,0:3,17:NULL:253.744:366.612,131.36:0.0,0.0:0.0,4.85428e-05,0.999955	0/0:24:1.00001:3,3:3-3,3-3:20,4,0,0:3,20:NULL:115.168:326.675,113.385:0.0,0.0:0.0,3.28267e-06,1.0
-chr1	8917312	.	GTTTGTTTGTTT	.	.	.	END=8917323;RU=gttt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,18,0,0:3,25:NULL:266.186:366.612,131.36:0.0,0.0:0.0,3.14481e-07,1.0	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:159.076:326.675,113.385:0.0,0.0:0.0,6.01145e-06,0.999995
-chr1	8917711	.	TTTGTTTGTTTGTTTG	.	.	.	END=8917726;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:4,4:4-4,4-4:22,18,0,0:4,22:NULL:258.297:366.612,131.36:0.0,0.0:0.0,3.57385e-06,1.0	0/0:39:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:240.042:326.675,113.385:0.0,0.0:0.0,7.93477e-07,1.0
-chr1	8926905	.	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	.	.	END=8926964;RU=tttc;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.638773:10,10:10-10,10-10:4,6,0,2:10,4:3,2:84.7246:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:22:0.527139:15,15:8-15,8-15:4,7,0,9:15,4:2,1|3,1|4,1|5,1|7,1|11,2|12,1|14,1:152.15:326.675,113.385:3.13625,3.13625:2.44555e-09,0.341895,0.658126
-chr1	8927634	.	CTCTCTCTCTCTCTCT	CTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8927649;RU=ct;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.0520976:4,26:1-15,4-27:0,14,0,2:NULL:15,1|26,1:148.603:366.612,131.36:4.1245,7.9309:4.7329e-14,0.622097,0.377956	0/0:52:0.999995:8,8:8-8,8-8:28,18,0,6:7,2|8,26:4,1|6,2|7,3:336.47:326.675,113.385:0.0,0.0:2.082e-42,6.42184e-06,0.999995
-chr1	8928347	.	AAACAAACAAACAAAC	.	.	.	END=8928362;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.165297:4,4:4-7,4-7:0,20,0,0:NULL:NULL:193.107:366.612,131.36:1.38465,1.38465:0.0,0.0,1.0	0/0:28:0.999279:4,4:4-4,4-4:14,14,0,0:4,14:NULL:181.16:326.675,113.385:0.0,0.0:0.0,0.000534942,0.999469
-chr1	8931732	.	TTTGTTTGTTTGTTTG	.	.	.	END=8931747;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999978:4,4:4-4,4-4:19,16,0,0:4,19:NULL:221.065:366.612,131.36:0.0,0.0:0.0,3.19381e-05,0.999971	0/0:16:0.995511:4,4:4-4,4-4:11,3,0,2:4,11:2,1|3,1:84.3862:326.675,113.385:0.0,0.0:3.83811e-36,0.00198111,0.998026
-chr1	8932575	.	TTTATTTATTTATTTA	.	.	.	END=8932590;RU=ttta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:25,18,0,2:4,25:3,2:275.257:366.612,131.36:0.0,0.0:0.0,1.20957e-07,1.0	0/0:28:0.99834:4,4:4-4,4-4:13,15,0,0:4,13:NULL:182.651:326.675,113.385:0.0,0.0:2.88158e-36,0.00128161,0.998724
-chr1	8937294	.	GAGGCAGAGGCAGAGGCA	GAGGCAGAGGCA	.	.	END=8937311;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.999806:2,2:2-2,2-2:15,19,0,0:2,15:NULL:228.073:366.612,131.36:0.0,0.0:0.999911,8.97412e-05,0.0	0/0:18:0.999731:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.413:326.675,113.385:0.0,0.0:8.13e-43,0.000145271,0.999857
-chr1	8942569	.	TCTTTCTTTCTTTCTT	.	.	.	END=8942584;RU=tctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.991117:4,4:4-4,4-4:10,11,0,4:4,10:2,1|3,3:164.949:366.612,131.36:0.0,0.0:9.58098e-29,0.0041009,0.995908	0/0:17:0.99744:4,4:4-4,4-4:12,5,0,0:4,12:NULL:92.7736:326.675,113.385:0.0,0.0:6.66647e-35,0.00157776,0.998428
-chr1	8943948	.	GTTTTTGTTTTTGTTTTT	.	.	.	END=8943965;RU=gttttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:25,16,0,2:3,25:2,2:263.669:366.612,131.36:0.0,0.0:0.0,2.36322e-07,1.0	0/0:18:0.998791:3,3:3-3,3-3:13,5,0,0:3,13:NULL:96.9382:326.675,113.385:0.0,0.0:5.3e-44,0.000689368,0.999316
-chr1	8944123	.	GTTGGTTGGTTGGTTGGTTG	GTTGGTTGGTTGGTTG	.	.	END=8944142;RU=gttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.166411:4,4:1-4,1-4:0,20,0,4:NULL:4,4:207.832:366.612,131.36:0.699545,0.699545:0.272568,0.516949,0.210488	0/0:40:1.0:5,5:5-5,5-5:25,8,0,7:5,25:3,2|4,5:221.734:326.675,113.385:0.0,0.0:0.0,7.72888e-08,1.0
-chr1	8945703	.	ACACACACACACACAC	ACACACACACACACACACAC	.	.	END=8945718;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.99884:10,10:9-10,9-10:24,17,0,4:9,3|10,21:6,1|9,2|10,1:305.1:366.612,131.36:0.309,0.309:0.0,8.1627e-08,1.0	0/0:27:0.99982:8,8:8-8,8-8:16,5,0,6:8,16:5,1|6,3|7,2:154.178:326.675,113.385:0.0,0.0:2.7511e-30,5.01359e-05,0.999949
-chr1	8946213	.	ACACACACACACACACACACAC	ACACACACAC,ACACACACACACACAC	.	.	END=8946234;RU=ac;PERIOD=2;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:59:1.0:5,8:5-5,8-8:35,18,0,4:5,23|8,12:6,2|7,2:359.627:366.612,131.36:0.0,0.0:1.0,1.40569e-24,0.0	0/0:32:0.993926:11,11:10-11,10-11:20,6,0,5:10,2|11,18:4,1|5,1|9,1|10,2:180.137:326.675,113.385:0.398753,0.398753:2.41738e-26,0.00609946,0.993917
-chr1	8949155	.	ATTTATTTATTT	.	.	.	END=8949166;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999956:3,3:3-3,3-3:16,28,0,2:3,16:2,2:345.392:366.612,131.36:0.0,0.0:0.0,4.12694e-05,0.999963	0/0:18:0.999001:3,3:3-3,3-3:13,5,0,0:3,13:NULL:95.5095:326.675,113.385:0.0,0.0:2.07056e-40,0.000524939,0.999477
-chr1	8954485	.	AATAAATAAATAAATA	.	.	.	END=8954500;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.339876:4,4:1-4,1-4:4,24,0,0:4,4:NULL:256.281:366.612,131.36:1.28766,1.28766:9.34563e-13,0.589488,0.410587	0/0:21:0.995693:4,4:4-4,4-4:11,8,0,2:4,11:3,2:132.213:326.675,113.385:0.0,0.0:2.8702e-33,0.00223349,0.997775
-chr1	8957579	.	AAACAAACAAAC	.	.	.	END=8957590;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.998328:3,3:3-3,3-3:12,20,0,0:3,12:NULL:230.836:366.612,131.36:0.0,0.0:1.85379e-37,0.00112181,0.998883	0/0:25:0.999946:3,3:3-3,3-3:17,6,0,2:3,17:2,2:133.668:326.675,113.385:0.0,0.0:0.0,2.2052e-05,0.999979
-chr1	8962592	.	TTTATTTATTTATTTATTTATTTATTTA	.	.	.	END=8962619;RU=ttta;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:1.00001:7,7:7-8,7-8:22,2,0,3:7,22:3,1|5,1|6,1:130.768:366.612,131.36:0.298675,0.298675:0.0,8.84921e-07,1.0	0/0:22:0.991848:7,7:7-8,7-8:10,7,0,4:7,10:5,2|6,2:139.12:326.675,113.385:0.452422,0.452422:1.87179e-23,0.0030756,0.996935
-chr1	8966427	.	AATGAATGAATGAATG	.	.	.	END=8966442;RU=aatg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:34,15,0,3:4,34:3,3:294.258:366.612,131.36:0.0,0.0:0.0,2.03031e-10,1.0	0/0:28:0.999909:4,4:4-4,4-4:16,8,0,4:4,16:3,4:164.559:326.675,113.385:0.0,0.0:0.0,3.99346e-05,0.999963
-chr1	8967541	.	AAAACAAAACAAAACAAAACAAAAC	AAAAC	.	.	END=8967565;RU=aaaac;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.030121:1,1:1-2,1-2:0,10,0,0:NULL:NULL:91.174:366.612,131.36:0.553571,0.553571:0.292457,0.527873,0.179681	0/0:18:0.991041:5,5:5-5,5-5:10,6,0,2:5,10:4,2:114.147:326.675,113.385:0.0,0.0:2.27669e-34,0.00402819,0.995983
-chr1	8969212	.	CTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=8969235;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.315118:15,15:15-16,15-16:3,2,0,0:15,3:NULL:33.7344:366.612,131.36:0.539944,0.539944:0.0,0.0,1.0	0/0:11:0.660708:12,12:12-13,12-13:5,1,0,4:12,5:6,1|7,1|9,1|10,1:61.3337:326.675,113.385:0.345543,0.345543:4.09213e-05,0.150859,0.849184
-chr1	8969424	.	TATATATATATATATATATATATATATATATATATATATA	TATATATATATATA	.	.	END=8969463;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00330237:7,7:1-7,1-7:0,6,0,0:NULL:NULL:59.7665:366.612,131.36:2.0456,2.0456:0.449076,0.48442,0.066672	0/0:6:0.174936:20,20:18-20,18-20:2,2,0,0:20,2:NULL:27.3013:326.675,113.385:0.744881,0.744881:0.00757335,0.50548,0.487012
-chr1	8969463	.	AGAGAGAGAGAGAGAGAGAGAGAG	AG	.	.	END=8969486;RU=ag;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00373898:1,1:1-8,1-8:0,6,0,0:NULL:NULL:60.4272:366.612,131.36:1.77987,1.77987:0.244967,0.559202,0.195847	0/0:14:0.922272:12,12:12-12,12-12:7,4,0,3:12,7:7,1|10,1|11,1:88.785:326.675,113.385:0.0,0.0:6.57346e-13,0.027556,0.972496
-chr1	8974355	.	CATCATCATCAT	CATCATCATCATCATCAT	.	.	END=8974366;RU=cat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.000355263:6,6:6-6,6-6:0,1,0,0:NULL:NULL:10.2861:366.612,131.36:0.0,0.0:0.00265944,0.115218,0.882229	0/0:47:1.0:4,4:4-4,4-4:24,23,0,0:4,24:NULL:300.522:326.675,113.385:0.0,0.0:0.0,8.12535e-07,1.0
-chr1	8976339	.	TTATTATTATTA	TTATTATTATTATTA	.	.	END=8976350;RU=tta;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.838289:5,5:5-5,5-5:6,16,0,0:5,6:NULL:172.039:366.612,131.36:0.19802,0.19802:1.00381e-25,0.0844077,0.91569	0/0:35:0.999996:4,4:4-5,4-5:20,14,0,0:4,20:NULL:213.92:326.675,113.385:0.431574,0.431574:0.0,1.74031e-05,0.999986
-chr1	8976507	.	CCCACCCACCCA	.	.	.	END=8976518;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999913:3,3:3-3,3-3:16,12,0,0:3,16:NULL:177.625:366.612,131.36:0.0,0.0:0.0,5.45229e-05,0.999948	0/0:60:1.0:3,3:3-3,3-3:37,21,0,2:3,37:2,2:353.756:326.675,113.385:0.0,0.0:0.0,5.56012e-11,1.0
-chr1	8977413	.	AGGAGGAGGAGG	.	.	.	END=8977424;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:4,4:4-4,4-4:22,14,0,0:4,22:NULL:211.443:366.612,131.36:0.0,0.0:0.0,1.70713e-06,1.0	0/0:38:0.999979:4,4:4-4,4-4:18,18,0,2:4,18:3,2:251.578:326.675,113.385:0.0,0.0:0.0,1.51235e-05,0.999986
-chr1	8978639	.	AAAATTAAAATTAAAATT	AAAATT	.	.	END=8978656;RU=aaaatt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:29:0.999948:3,3:3-3,3-3:17,12,0,0:3,17:NULL:178.649:326.675,113.385:0.0,0.0:0.0,4.79368e-05,0.999955
-chr1	8992158	.	AAACAAACAAACAAACAAACAAACAAACAAAC	.	.	.	END=8992189;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999219:8,8:7-8,7-8:13,14,0,11:8,13:2,2|4,3|5,3|7,3:262.314:366.612,131.36:0.311527,0.311527:1.92324e-35,0.000353678,0.999651	0/0:41:0.997771:8,8:8-8,8-8:12,21,0,8:8,12:3,1|4,1|6,4|7,2:299.467:326.675,113.385:0.0,0.0:4.40686e-32,0.00147235,0.998534
-chr1	8996946	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=8996997;RU=tc;PERIOD=2;REF=26.0;EXPTHRESH=26	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.443872:26,26:24-31,24-31:4,15,0,9:26,4:5,2|13,2|17,1|18,1|20,1|23,1|24,1:225.953:366.612,131.36:2.41178,2.41178:8.45751e-06,0.180153,0.819909	1/2:18:0.250404:25,28:25-28,25-28:2,5,0,9:25,2:9,1|15,3|16,1|17,1|19,1|25,1|28,1:129.107:326.675,113.385:0.807523,0.960549:6.73269e-08,0.946104,0.053981
-chr1	8997017	.	TTTCTTTCTTTC	.	.	.	END=8997028;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999753:3,3:3-3,3-3:15,14,0,0:3,15:NULL:183.878:366.612,131.36:0.0,0.0:0.0,0.00015218,0.999849	0/0:18:0.999859:3,3:3-3,3-3:16,2,0,0:3,16:NULL:80.5162:326.675,113.385:0.0,0.0:0.0,6.20326e-05,0.999941
-chr1	9000049	.	ATGATGATGATG	.	.	.	END=9000060;RU=atg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:4,4:4-4,4-4:35,14,0,3:4,35:3,3:288.249:366.612,131.36:0.0,0.0:0.0,7.66698e-11,1.0	0/0:41:1.0:4,4:4-4,4-4:24,15,0,2:4,24:3,2:250.432:326.675,113.385:0.0,0.0:0.0,4.66483e-07,1.0
-chr1	9000143	.	AAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=9000170;RU=aaac;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:1.0:6,6:6-6,6-6:29,20,0,2:6,29:3,2:318.407:366.612,131.36:0.0,0.0:1.0,5.87949e-09,0.0	0/0:48:1.0:7,7:7-7,7-7:24,13,0,11:7,24:2,2|4,3|5,2|6,4:298.135:326.675,113.385:0.0,0.0:0.0,1.88854e-07,1.0
-chr1	9003159	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9003188;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:10:0.0294368:12,12:12-18,12-18:0,7,0,2:NULL:6,1|12,1:79.4565:366.612,131.36:1.34033,1.34033:0.235741,0.502044,0.26226	0/0:19:0.9442:15,15:14-15,14-15:8,5,0,5:15,8:5,1|9,2|10,1|11,1:120.392:326.675,113.385:0.195027,0.195027:3.1254e-15,0.0284693,0.971582
-chr1	9003186	.	TCTATCTATCTATCTA	.	.	.	END=9003201;RU=tcta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:9:0.338585:4,4:1-4,1-4:3,6,0,0:4,3:NULL:67.7316:366.612,131.36:0.645921,0.645921:0.000190663,0.405217,0.594663	0/0:13:0.986866:4,4:4-4,4-4:10,3,0,0:4,10:NULL:68.9658:326.675,113.385:0.0,0.0:3.03064e-13,0.00828464,0.991734
-chr1	9007831	.	TGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9007856;RU=tg;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.468166:26,26:25-26,25-26:4,14,0,4:26,4:10,1|15,1|16,1|23,1:181.784:366.612,131.36:0.539944,0.539944:0.0,0.0,1.0	0/0:33:0.858364:13,13:12-14,12-14:21,8,0,4:12,5|13,14|14,2:9,1|11,2|12,1:214.993:326.675,113.385:0.560784,0.560784:4.82571e-17,0.137341,0.862749
-chr1	9008428	.	TATTTATTTATT	.	.	.	END=9008439;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:196.612:366.612,131.36:0.0,0.0:0.0,2.74101e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:193.865:326.675,113.385:0.0,0.0:0.0,2.09592e-07,1.0
-chr1	9010782	.	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	ATATAT,ATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9010839;RU=at;PERIOD=2;REF=29.0;EXPTHRESH=29	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:7:0.0877655:3,3:1-4,1-4:0,6,0,0:NULL:NULL:54.7806:366.612,131.36:1.06139,1.06139:1.0,0.0,0.0	2/2:6:0.0249467:22,22:22-25,22-25:0,3,0,2:NULL:5,1|19,1:40.9669:326.675,113.385:1.44541,1.44541:1.0,0.0,0.0
-chr1	9010840	.	ACACACACACACACAC	ACAC	.	.	END=9010855;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00198465:2,2:2-14,2-14:0,6,0,0:NULL:NULL:55.5589:366.612,131.36:5.27203,5.27203:0.0549711,0.404721,0.54048	0/0:5:0.392876:8,8:8-8,8-8:3,2,0,0:8,3:NULL:29.0822:326.675,113.385:0.0,0.0:3.84704e-09,0.321237,0.678776
-chr1	9012172	.	TATATATATATATATATATA	TATATATA	.	.	END=9012191;RU=ta;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00232879:4,4:1-7,1-7:0,6,0,0:NULL:NULL:53.2959:366.612,131.36:1.41352,1.41352:0.142922,0.527029,0.330191	0/0:14:0.886758:10,10:9-10,9-10:7,6,0,0:10,7:NULL:84.391:326.675,113.385:0.398507,0.398507:3.0459e-08,0.0742848,0.925809
-chr1	9015094	.	AAAGAAAGAAAG	.	.	.	END=9015105;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.988736:3,3:3-3,3-3:10,7,0,0:3,10:NULL:108.484:366.612,131.36:0.0,0.0:1.22412e-30,0.00610427,0.99391	0/0:35:0.99985:3,3:3-3,3-3:16,19,0,0:3,16:NULL:229.756:326.675,113.385:0.0,0.0:0.0,0.000113049,0.999888
-chr1	9015582	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9015617;RU=gt;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:48:0.879977:11,12:11-11,11-12:24,18,0,6:10,4|11,20:5,2|7,1|8,2|12,1:332.225:366.612,131.36:0.0,0.537944:1.0,0.0,0.0	0/0:42:0.840554:18,18:11-18,11-18:10,15,0,15:17,2|18,8:5,3|8,1|10,1|12,2|13,2|15,3|16,1|17,1|18,1:307.155:326.675,113.385:2.7477,2.7477:7.32886e-17,0.147725,0.852355
-chr1	9020212	.	GAATGAATGAATGAATGAATGAAT	GAATGAATGAAT,GAATGAATGAATGAAT	.	.	END=9020235;RU=gaat;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.946082:3,4:2-3,2-4:8,14,0,2:3,5|4,3:3,2:183.765:366.612,131.36:0.275098,0.776833:0.999713,0.000286357,8.49709e-27	0/0:23:0.999425:6,6:6-6,6-6:15,8,0,0:6,15:NULL:135.366:326.675,113.385:0.0,0.0:1.88457e-16,0.000431303,0.999569
-chr1	9021852	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9021905;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:14:0.0340543:30,30:26-30,26-30:0,7,0,6:NULL:5,1|8,1|9,1|10,1|22,1|26,1:110.405:366.612,131.36:1.08568,1.08568:0.0470722,0.36094,0.592117	1/1:20:0.0477433:26,26:26-27,26-27:0,7,0,11:NULL:8,1|10,1|12,1|13,1|14,1|15,1|16,1|24,2|26,2:156.553:326.675,113.385:0.534653,0.534653:0.0916676,0.439076,0.469425
-chr1	9022665	.	TGTTTTGTTTTGTTTTGTTTTGTTT	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	.	.	END=9022689;RU=tgttt;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.149837:9,9:6-9,6-9:2,14,0,4:9,2:3,2|5,2:165.398:366.612,131.36:1.43267,1.43267:0.0,0.0,1.0	0/0:36:1.0:5,5:5-5,5-5:26,6,0,4:5,26:2,1|3,2|4,1:189.236:326.675,113.385:0.0,0.0:0.0,6.84067e-08,1.0
-chr1	9025967	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9026010;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.293938:25,25:25-26,25-26:3,10,0,8:25,3:7,1|8,1|11,1|13,1|15,1|20,1|21,1|24,1:172.892:366.612,131.36:0.590584,0.590584:0.0,0.0,1.0	0/0:31:0.84528:22,22:8-23,8-23:7,8,0,11:22,7:5,1|7,1|8,1|9,1|11,1|13,1|14,1|18,2|19,2:191.718:326.675,113.385:4.31912,4.31912:4.1625e-08,0.0753746,0.924719
-chr1	9027019	.	TTTATTTATTTA	TTTATTTATTTATTTA	.	.	END=9027030;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.999559:4,4:4-4,4-4:15,17,0,0:4,15:NULL:210.767:366.612,131.36:0.0,0.0:1e-45,0.000217421,0.999787	0/0:17:0.985866:3,3:3-3,3-3:9,6,0,2:3,9:2,2:101.237:326.675,113.385:0.0,0.0:1.1158e-20,0.00535034,0.994663
-chr1	9029369	.	ATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9029380;RU=at;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:3:0.000321662:27,57:14-77,14-76:0,3,0,0:NULL:NULL:26.0914:366.612,131.36:24.3716,23.0378:0.00111219,0.0825436,0.916443	0/0:31:0.994092:6,6:4-7,4-7:19,10,0,0:6,17|7,2:NULL:171.876:326.675,113.385:0.397522,0.397522:1.02527e-22,4.64167e-05,0.999956
-chr1	9029380	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9029417;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.216645:17,17:16-17,16-17:2,2,0,3:17,2:7,1|9,1|10,1:49.2363:366.612,131.36:0.607279,0.607279:0.765264,0.234492,0.000271143	0/0:46:0.977209:19,19:17-20,17-20:18,16,0,11:19,16|20,2:5,2|9,2|10,1|13,1|16,1|17,1|18,2|19,1:315.247:326.675,113.385:0.483833,0.483833:1.89571e-33,1.92268e-05,0.99998
-chr1	9029844	.	CAACAACAACAACAA	CAACAACAACAA	.	.	END=9029858;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.0:4,4:4-4,4-4:23,8,0,0:4,23:NULL:165.026:366.612,131.36:0.0,0.0:1.0,4.87866e-07,0.0	0/0:40:1.0:5,5:5-5,5-5:23,13,0,4:5,23:3,1|4,3:240.983:326.675,113.385:0.0,0.0:0.0,3.9763e-07,1.0
-chr1	9036620	.	TTGCTTGCTTGC	.	.	.	END=9036631;RU=ttgc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:258.932:366.612,131.36:0.0,0.0:0.0,2.43865e-07,1.0	0/0:31:0.999979:3,3:3-3,3-3:18,11,0,2:3,18:2,2:189.103:326.675,113.385:0.0,0.0:0.0,1.8714e-05,0.999985
-chr1	9037227	.	TTGTTTGTTTGT	.	.	.	END=9037238;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.987905:3,3:3-3,3-3:10,26,0,0:3,10:NULL:281.733:366.612,131.36:0.0,0.0:6.40431e-34,0.00634645,0.993669	0/0:25:0.999784:3,3:3-3,3-3:15,8,0,2:3,15:2,2:141.515:326.675,113.385:0.0,0.0:0.0,9.43857e-05,0.999909
-chr1	9044406	.	TATATATATATA	.	.	.	END=9044417;RU=ta;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999311:6,6:6-6,6-6:14,14,0,0:6,14:NULL:185.079:366.612,131.36:0.0,0.0:6.79552e-31,0.000474014,0.999529	0/0:24:0.957473:6,6:6-6,6-6:9,15,0,0:6,9:NULL:171.372:326.675,113.385:0.0,0.0:1.20608e-19,0.0299865,0.970067
-chr1	9044826	.	CTTTTCTTTTCTTTTCTTTT	CTTTT	.	.	END=9044845;RU=ctttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:30:0.999993:4,4:4-4,4-4:19,9,0,2:4,19:3,2:174.322:326.675,113.385:0.0,0.0:0.0,1.1877e-05,0.999987
-chr1	9051415	.	TTTGTTTGTTTGTTTGTTTG	TTTG	.	.	END=9051434;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:9:0.0162539:1,1:1-2,1-2:0,9,0,0:NULL:NULL:76.295:366.612,131.36:0.465241,0.465241:0.194826,0.531917,0.273329	0/0:40:1.0:5,5:5-5,5-5:30,10,0,0:5,30:NULL:213.903:326.675,113.385:0.0,0.0:0.0,7.71664e-09,1.0
-chr1	9052040	.	ATATATATATATAT	ATATATATATAT	.	.	END=9052053;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998463:6,6:6-6,6-6:13,23,0,0:6,13:NULL:267.562:366.612,131.36:0.0,0.0:0.999553,0.000449969,6.37458e-27	0/0:14:0.974584:7,7:7-7,7-7:9,5,0,0:7,9:NULL:79.1573:326.675,113.385:0.0,0.0:2.30478e-15,0.0141506,0.985881
-chr1	9054350	.	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTG	.	.	END=9054388;RU=gtg;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:61:0.999893:11,11:11-11,11-11:18,30,0,12:11,18:4,2|5,1|6,1|7,1|8,4|10,3:444.343:366.612,131.36:0.0990099,0.0990099:0.999963,4.02213e-05,2.23574e-35	0/0:43:0.97978:13,13:12-13,12-13:17,17,0,9:12,2|13,15:3,2|4,2|5,1|6,1|8,1|9,2:304.92:326.675,113.385:0.334882,0.334882:9.55963e-30,0.0202098,0.979833
-chr1	9055550	.	GAGAGAGAGAGA	.	.	.	END=9055561;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999743:6,6:6-6,6-6:15,12,0,0:6,15:NULL:169.215:366.612,131.36:0.0,0.0:1.53773e-33,0.0001457,0.999857	0/0:23:0.999908:6,6:6-6,6-6:17,6,0,0:6,17:NULL:124.175:326.675,113.385:0.0,0.0:2.18165e-37,5.48361e-05,0.999948
-chr1	9057035	.	ACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9057070;RU=ac;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.697452:25,25:25-25,25-25:5,15,0,7:25,5:10,1|12,1|13,2|14,1|16,1|23,1:220.418:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:36:0.897055:18,18:17-18,17-18:12,10,0,14:17,3|18,9:5,2|7,1|8,1|9,1|10,2|11,1|13,2|14,1|15,1|16,1|17,1:260.454:326.675,113.385:0.345543,0.345543:3.99221e-10,0.0980294,0.902074
-chr1	9065820	.	ACCCACCCACCC	.	.	.	END=9065831;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.721236:3,3:1-3,1-3:5,20,0,0:3,5:NULL:206.575:366.612,131.36:0.647134,0.647134:1.95027e-15,0.215081,0.784963	0/0:30:0.977326:3,3:3-3,3-3:9,21,0,0:3,9:NULL:225.439:326.675,113.385:0.0,0.0:8.67199e-27,0.0162112,0.983822
-chr1	9066850	.	TTGTTGTTGTTG	.	.	.	END=9066861;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999984:4,4:4-4,4-4:18,12,0,0:4,18:NULL:188.271:366.612,131.36:0.0,0.0:0.0,2.54679e-05,0.999978	0/0:34:0.99999:4,4:4-4,4-4:18,13,0,3:4,18:3,3:216.888:326.675,113.385:0.0,0.0:0.0,1.61757e-05,0.999986
-chr1	9077038	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=9077077;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:35:0.290493:11,15:11-11,11-16:14,10,0,10:10,2|11,12:6,2|7,2|8,2|9,1|11,1|12,1|14,1:248.852:366.612,131.36:0.0,1.72902:1.0,0.0,0.0	3/0:41:0.992087:19,20:19-22,20-20:15,9,0,16:19,7|20,8:4,2|5,2|10,2|11,1|13,1|14,2|16,2|17,1|18,2|19,1:283.071:326.675,113.385:0.914864,0.19802:3.63782e-08,0.992064,0.0079529
-chr1	9080272	.	AAAGGAAAAGGAAAAGGA	.	.	.	END=9080289;RU=aaagga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:206.352:366.612,131.36:0.0,0.0:0.0,5.27149e-06,0.999995	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:167.245:326.675,113.385:0.0,0.0:0.0,1.10308e-07,1.0
-chr1	9093163	.	CAACAACAACAA	.	.	.	END=9093174;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:27,10,0,0:4,27:NULL:201.787:366.612,131.36:0.0,0.0:0.0,6.24979e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:23,7,0,2:4,23:3,2:169.731:326.675,113.385:0.0,0.0:0.0,4.45989e-07,1.0
-chr1	9101067	.	TAAATAAATAAA	.	.	.	END=9101078;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:26,18,0,2:3,26:2,2:283.387:366.612,131.36:0.0,0.0:0.0,6.84041e-08,1.0	0/0:33:0.999995:3,3:3-3,3-3:19,14,0,0:3,19:NULL:202.305:326.675,113.385:0.0,0.0:0.0,1.23536e-05,0.999987
-chr1	9101909	.	GATGGATGGATGGATGGATGGATGGATGGATGGATGGATG	.	.	.	END=9101948;RU=gatg;PERIOD=4;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.909487:10,10:10-10,10-10:7,11,0,2:10,7:5,1|8,1:150.22:366.612,131.36:0.0,0.0:1.72265e-19,0.06029,0.9398	0/0:37:0.999347:10,10:6-10,6-10:14,12,0,10:10,14:4,3|5,2|6,1|8,2|9,2:243.867:326.675,113.385:1.80969,1.80969:3.52163e-38,0.00031278,0.999689
-chr1	9101975	.	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	.	.	END=9102022;RU=agat;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.998561:11,11:10-11,10-11:13,13,0,12:11,13:4,1|6,2|8,1|9,2|10,6:266.263:366.612,131.36:0.323567,0.323567:0.999219,0.000782351,4.25651e-20	0/0:43:0.999885:12,12:12-12,12-12:17,13,0,12:12,17:2,1|3,1|4,2|5,1|6,1|7,2|8,2|11,2:282.169:326.675,113.385:0.139319,0.139319:1.82656e-35,6.6536e-05,0.999934
-chr1	9103931	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9103958;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.848607:19,19:17-20,17-20:14,13,0,15:19,12|20,2:5,1|7,2|8,1|9,1|13,1|14,1|15,2|16,4|18,2:305.51:366.612,131.36:0.586587,0.586587:0.0,0.0,1.0	0/0:33:0.9842:14,14:12-14,12-14:10,10,0,12:14,10:4,1|5,4|6,4|9,1|11,1|13,1:235.664:326.675,113.385:0.765392,0.765392:4.05923e-13,0.0066438,0.99337
-chr1	9104117	.	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG	.	.	END=9104156;RU=ttttg;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:0.99989:9,9:9-9,9-9:16,11,0,7:9,16:2,1|3,1|4,1|5,1|7,1|8,2:220.223:366.612,131.36:0.0,0.0:0.0,2.07957e-05,0.999979	0/0:37:0.999927:8,8:8-8,8-8:17,14,0,6:8,17:3,3|4,2|6,1:241.36:326.675,113.385:0.0,0.0:0.0,6.51563e-05,0.999934
-chr1	9108162	.	AATCAATCAATCAATC	.	.	.	END=9108177;RU=aatc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:179.28:366.612,131.36:0.0,0.0:0.0,7.04389e-06,0.999994	0/0:41:1.00001:4,4:4-4,4-4:22,14,0,5:4,22:2,1|3,4:248.72:326.675,113.385:0.0,0.0:0.0,9.11744e-07,1.0
-chr1	9118041	.	TTTATTTATTTA	.	.	.	END=9118052;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.997525:3,3:3-3,3-3:13,17,0,0:3,13:NULL:208.579:366.612,131.36:0.0,0.0:3.4895e-41,0.00174604,0.998261	0/0:23:1.0:3,3:3-3,3-3:19,2,0,2:3,19:2,2:106.128:326.675,113.385:0.0,0.0:0.0,5.02187e-06,0.999995
-chr1	9118141	.	CCCACCCACCCACCCACCCACCCA	.	.	.	END=9118164;RU=ccca;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.964596:6,6:6-6,6-6:8,10,0,4:6,8:3,1|4,1|5,2:153.156:366.612,131.36:0.0,0.0:1.70703e-22,0.0190878,0.980953	0/0:19:0.969243:6,6:6-6,6-6:8,4,0,7:6,8:2,1|3,3|5,3:117.826:326.675,113.385:0.0,0.0:7.17771e-23,0.0105606,0.989462
-chr1	9127223	.	TATATATATATATATA	.	.	.	END=9127238;RU=ta;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999925:8,8:8-8,8-8:18,9,0,0:8,18:NULL:156.836:366.612,131.36:0.0990099,0.0990099:1.19149e-23,4.76761e-05,0.999955	0/0:22:0.66523:8,8:8-8,8-8:5,17,0,0:8,5:NULL:181.379:326.675,113.385:0.0,0.0:3.98815e-07,0.190437,0.809619
-chr1	9130256	.	CATCATCATCATCAT	.	.	.	END=9130270;RU=cat;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999986:5,5:5-5,5-5:18,11,0,0:5,18:NULL:173.323:366.612,131.36:0.0,0.0:0.0,2.12812e-05,0.999979	0/0:43:1.0:5,5:5-5,5-5:25,14,0,4:5,25:3,1|4,3:257.681:326.675,113.385:0.0,0.0:0.0,6.90025e-08,1.0
-chr1	9131824	.	TAAATAAATAAA	.	.	.	END=9131835;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999531:3,3:3-3,3-3:14,15,0,0:3,14:NULL:188.824:366.612,131.36:0.0,0.0:0.0,0.000294935,0.999706	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:173.923:326.675,113.385:0.0,0.0:0.0,3.12728e-06,1.0
-chr1	9133465	.	AAGCAAGCAAGC	AAGCAAGC	.	.	END=9133476;RU=aagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999676:2,2:2-2,2-2:15,10,0,0:2,15:NULL:151.462:366.612,131.36:0.0,0.0:0.999812,0.000188883,2.7e-43	0/0:32:0.999907:3,3:3-3,3-3:17,15,0,0:3,17:NULL:200.299:326.675,113.385:0.0,0.0:0.0,6.32466e-05,0.99994
-chr1	9142553	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9142586;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.0344154:35,35:4-38,4-38:0,11,0,9:NULL:14,1|18,2|22,1|23,1|32,2|35,2:177.59:366.612,131.36:8.20969,8.20969:0.0,0.0698149,0.930281	0/0:40:0.325667:17,17:16-20,16-20:25,6,0,8:16,6|17,19:5,1|6,1|7,1|10,1|11,1|12,1|15,1|20,1:259.707:326.675,113.385:1.49914,1.49914:9.32892e-22,0.0031623,0.996845
-chr1	9143268	.	AATAAATAAATA	.	.	.	END=9143279;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.988991:3,3:3-3,3-3:10,13,0,0:3,10:NULL:156.669:366.612,131.36:0.0,0.0:1.49166e-29,0.00640972,0.993603	0/0:40:1.0:3,3:3-3,3-3:19,17,0,4:3,19:2,4:255.414:326.675,113.385:0.0,0.0:0.0,6.32514e-06,0.999994
-chr1	9154316	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9154355;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.88495:17,17:16-18,16-18:19,19,0,9:16,5|17,12|18,2:6,2|7,1|8,1|9,1|11,1|12,1|14,1|17,1:345.099:366.612,131.36:0.575792,0.575792:0.999988,1.14857e-05,1.63775e-36	0/2:35:0.272305:20,37:20-20,19-39:15,8,0,11:19,2|20,13:7,1|10,2|12,2|14,1|15,1|17,1|19,2|36,1:242.669:326.675,113.385:0.0990099,8.55464:2.43813e-16,1.05788e-05,0.999993
-chr1	9155619	.	ATAAATAAATAA	.	.	.	END=9155630;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999851:3,3:3-3,3-3:16,12,0,0:3,16:NULL:169.846:366.612,131.36:0.0,0.0:1.05e-43,8.45388e-05,0.999918	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:138.642:326.675,113.385:0.0,0.0:0.0,4.30834e-06,0.999995
-chr1	9156170	.	TTTGTTTGTTTG	.	.	.	END=9156181;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999834:3,3:2-3,2-3:16,5,0,0:3,16:NULL:107.347:366.612,131.36:0.345543,0.345543:0.0,8.75503e-05,0.999917	0/0:31:1.0:3,3:3-3,3-3:20,11,0,0:3,20:NULL:175.6:326.675,113.385:0.0,0.0:0.0,4.95853e-06,0.999995
-chr1	9156695	.	GATGATGATGATGATGAT	.	.	.	END=9156712;RU=gat;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999953:6,6:5-6,5-6:18,25,0,5:6,18:4,2|5,3:340.272:366.612,131.36:0.236383,0.236383:1.4e-44,1.58438e-05,0.999986	0/0:36:0.999722:6,6:6-6,6-6:15,16,0,5:6,15:3,1|4,2|5,2:250.053:326.675,113.385:0.0,0.0:4.94222e-37,0.000153961,0.999849
-chr1	9157471	.	TGGTTGGTTGGTTGGTTGGTTGGT	.	.	.	END=9157494;RU=tggt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:6,6:6-6,6-6:19,16,0,6:6,19:2,1|3,2|4,1|5,2:269.107:366.612,131.36:0.0,0.0:0.0,8.59828e-06,0.999994	0/0:41:0.999594:6,6:5-6,5-6:14,19,0,7:6,14:3,1|4,5|5,1:286.031:326.675,113.385:0.334882,0.334882:0.0,0.000298026,0.999705
-chr1	9158960	.	AACAACAACAACAAC	AACAACAACAACAACAACAAC	.	.	END=9158974;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.987689:7,7:7-7,7-7:10,17,0,6:7,10:3,1|4,2|5,1|6,2:247.771:366.612,131.36:0.29703,0.29703:0.0,0.00145246,0.998551	0/0:27:1.0:5,5:5-5,5-5:19,6,0,2:5,19:4,2:146.829:326.675,113.385:0.0,0.0:0.0,7.46421e-06,0.999994
-chr1	9164239	.	CAACAACAACAA	.	.	.	END=9164250;RU=caa;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.984929:4,4:4-4,4-4:10,22,0,0:4,10:NULL:242.204:366.612,131.36:0.0,0.0:2.12531e-29,0.0121012,0.987928	0/0:39:1.0:4,4:4-4,4-4:24,15,0,0:4,24:NULL:226.222:326.675,113.385:0.0,0.0:0.0,5.94517e-07,1.0
-chr1	9167899	.	AACAAAAACAAAAACAAA	.	.	.	END=9167916;RU=aacaaa;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999676:3,3:3-3,3-3:15,14,0,2:3,15:2,1|3,1:208.483:366.612,131.36:0.0,0.0:0.0,0.000197021,0.999804	0/0:18:0.997682:3,3:3-3,3-3:12,6,0,0:3,12:NULL:107.052:326.675,113.385:0.0,0.0:4.81654e-40,0.00123496,0.99877
-chr1	9168809	.	TGGTGGTGGTGG	.	.	.	END=9168820;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:28,22,0,0:4,28:NULL:321.123:366.612,131.36:0.0,0.0:0.0,3.43302e-08,1.0	0/0:39:1.00001:4,4:4-4,4-4:21,16,0,2:4,21:3,2:240.021:326.675,113.385:0.0,0.0:0.0,1.95118e-06,1.0
-chr1	9174269	.	AAAATAAAATAAAAT	.	.	.	END=9174283;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998659:3,3:3-3,3-3:13,8,0,0:3,13:NULL:121.529:366.612,131.36:0.0,0.0:4.34e-43,0.000804771,0.999197	0/0:23:0.999924:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.148:326.675,113.385:0.0,0.0:0.0,4.24173e-05,0.999957
-chr1	9185149	.	AAATAAATAAAT	.	.	.	END=9185160;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:25,10,0,0:3,25:NULL:188.035:366.612,131.36:0.0,0.0:0.0,1.60488e-07,1.0	0/0:37:1.0:3,3:3-3,3-3:27,10,0,0:3,27:NULL:200.239:326.675,113.385:0.0,0.0:0.0,3.84078e-08,1.0
-chr1	9190774	.	TGTTTGTTTGTT	.	.	.	END=9190785;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.998971:3,3:3-3,3-3:13,8,0,0:3,13:NULL:126.822:366.612,131.36:0.0,0.0:3.9e-44,0.000613067,0.999392	0/0:28:0.999996:3,3:3-3,3-3:18,7,0,3:3,18:2,3:155.211:326.675,113.385:0.0,0.0:0.0,1.06511e-05,0.999993
-chr1	9192850	.	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG,AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG	.	.	END=9192944;RU=aaagg;PERIOD=5;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0708864:15,15:12-16,12-16:0,10,0,12:NULL:3,1|5,1|6,1|7,2|8,1|9,1|11,1|12,1|13,2|14,1:174.677:366.612,131.36:1.04623,1.04623:1.0,0.0,0.0	2/2:36:0.634562:17,17:9-17,9-17:4,14,0,17:17,4:2,1|5,1|6,2|8,1|9,2|11,1|13,3|14,1|15,3|16,2:270.043:326.675,113.385:3.99824,3.99824:0.88729,0.11281,2.86131e-10
-chr1	9198920	.	ATCCATCCATCC	.	.	.	END=9198931;RU=atcc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:20,11,0,2:3,20:2,2:195.498:366.612,131.36:0.0,0.0:0.0,2.88559e-06,1.0	0/0:42:1.0:3,3:3-3,3-3:26,16,0,0:3,26:NULL:247.93:326.675,113.385:0.0,0.0:0.0,1.34858e-07,1.0
-chr1	9200129	.	TTTATTTATTTA	.	.	.	END=9200140;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:20,14,0,0:3,20:NULL:209.886:366.612,131.36:0.0,0.0:0.0,9.18779e-06,0.999993	0/0:44:1.0:3,3:3-3,3-3:36,6,0,2:3,36:2,2:212.001:326.675,113.385:0.0,0.0:0.0,4.11194e-11,1.0
-chr1	9201395	.	TATATATATATATATATATATATATATATATATATATATA	TATATA	.	.	END=9201434;RU=ta;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:6:0.00226727:3,3:21-24,21-24:0,2,0,0:NULL:NULL:17.2916:366.612,131.36:1.13521,1.13521:0.516699,0.405381,0.0780363	0/0:9:0.134691:20,20:19-22,19-22:2,4,0,0:20,2:NULL:51.6454:326.675,113.385:0.765776,0.765776:0.00662868,0.410622,0.58284
-chr1	9203282	.	AGTCAGTCAGTC	.	.	.	END=9203293;RU=agtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:19,15,0,2:3,19:2,2:229.987:366.612,131.36:0.0,0.0:0.0,5.45693e-06,0.999995	0/0:40:1.00001:3,3:3-3,3-3:20,15,0,5:3,20:2,5:257.356:326.675,113.385:0.0,0.0:0.0,3.54959e-06,1.0
-chr1	9204564	.	TCATCATCATCA	.	.	.	END=9204575;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:217.629:366.612,131.36:0.0,0.0:0.0,2.91543e-07,1.0	0/0:31:0.999999:4,4:4-4,4-4:18,8,0,5:4,18:3,5:181.185:326.675,113.385:0.0,0.0:0.0,8.05792e-06,0.999994
-chr1	9211529	.	CAAAACAAAACAAAA	.	.	.	END=9211543;RU=caaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:2-3,2-3:21,12,0,2:3,21:2,2:212.916:366.612,131.36:0.374147,0.374147:0.0,2.66644e-06,1.0	0/0:26:0.999935:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.809:326.675,113.385:0.0,0.0:0.0,4.89388e-05,0.999955
-chr1	9211779	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACAC	.	.	END=9211816;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:35:0.913569:14,14:13-14,13-14:11,9,0,15:13,2|14,9:4,1|5,1|6,2|7,1|9,1|10,2|11,4|12,2|13,1:254.655:366.612,131.36:0.345543,0.345543:1.0,0.0,0.0	0/0:29:0.814705:19,19:18-20,18-20:6,12,0,9:19,6:6,1|7,2|14,1|15,1|16,2|18,2:206.507:326.675,113.385:0.55233,0.55233:1.1296e-08,0.0586354,0.941447
-chr1	9216945	.	GAGGGAGGGAGG	.	.	.	END=9216956;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:247.435:366.612,131.36:0.0,0.0:0.0,4.13697e-07,1.0	0/0:33:1.00001:3,3:3-3,3-3:21,12,0,0:3,21:NULL:193.378:326.675,113.385:0.0,0.0:0.0,3.34687e-06,1.0
-chr1	9218068	.	AATTAATTAATT	.	.	.	END=9218079;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.995878:3,3:3-3,3-3:11,8,0,0:3,11:NULL:117.08:366.612,131.36:0.0,0.0:4.43428e-34,0.00242352,0.997586	0/0:24:0.999921:3,3:3-3,3-3:17,7,0,0:3,17:NULL:133.889:326.675,113.385:0.0,0.0:0.0,4.7444e-05,0.999955
-chr1	9225255	.	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	.	.	END=9225306;RU=gaaa;PERIOD=4;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:33:0.999997:13,14:13-14,14-14:12,13,0,8:13,5|14,7:4,1|6,2|8,2|11,2|12,1:234.093:366.612,131.36:0.169767,0.0:1.91211e-24,1.68997e-08,1.0	0/0:33:0.838936:13,13:5-13,5-13:6,14,0,12:13,6:2,1|3,1|4,2|6,1|8,1|9,1|10,3|11,1|12,1:248.732:326.675,113.385:4.05346,4.05346:4.40474e-13,0.112307,0.88779
-chr1	9226135	.	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATA,ATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9226188;RU=ata;PERIOD=3;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.998211:10,10:9-11,9-11:13,24,0,9:10,13:3,2|6,1|7,3|8,1|9,2:335.221:366.612,131.36:0.312156,0.312156:1.0,0.0,0.0	2/0:22:0.990369:17,18:16-18,16-18:7,5,0,9:17,3|18,4:4,1|5,1|7,3|8,1|9,1|14,1|16,1:147.675:326.675,113.385:0.480988,0.363786:6.80332e-05,0.991309,0.00864358
-chr1	9227593	.	TGTTGTTGTTGTTGTTGTTGT	.	.	.	END=9227613;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.967829:7,7:7-7,7-7:8,9,0,3:7,8:5,1|6,2:136.638:366.612,131.36:0.0,0.0:4.71476e-15,0.00994836,0.990074	0/0:18:0.996976:7,7:6-7,6-7:12,3,0,2:7,12:5,1|6,1:91.0383:326.675,113.385:0.236383,0.236383:7.79232e-22,0.00126966,0.998733
-chr1	9227617	.	TTATTATTATTATTATTATTATTATTATTATTATTATTA	.	.	.	END=9227655;RU=tta;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.953525:13,13:13-13,13-13:8,9,0,4:13,8:6,1|9,1|10,1|12,1:147.325:366.612,131.36:0.0,0.0:7.76344e-13,0.0174828,0.982554	0/0:24:0.945038:13,13:12-13,12-13:8,7,0,8:13,8:3,3|5,1|6,2|7,1|11,1:156.105:326.675,113.385:0.298675,0.298675:1.16214e-12,0.0303655,0.969693
-chr1	9229745	.	TTTGTTTGTTTGTTTGTTTG	.	.	.	END=9229764;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.997521:5,5:5-5,5-5:12,14,0,6:5,12:2,1|3,4|4,1:219.47:366.612,131.36:0.0,0.0:9.983e-42,0.00150345,0.998503	0/0:35:1.00001:5,5:5-5,5-5:21,11,0,3:5,21:3,1|4,2:208.109:326.675,113.385:0.0,0.0:0.0,2.10188e-06,1.0
-chr1	9235751	.	TCTGATGTCTGTGTTCTGATGTCTGTGTTCTGATGTCTGTGT	.	.	.	END=9235792;RU=tctgatgtctgtgt;PERIOD=14;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.995393:3,3:3-3,3-3:15,24,0,0:3,15:NULL:287.148:366.612,131.36:0.0,0.0:1.91692e-17,0.00460891,0.995402	0/0:26:0.801702:3,3:1-3,1-3:8,18,0,0:3,8:NULL:202.589:326.675,113.385:0.569802,0.569802:1.96275e-09,0.194535,0.805516
-chr1	9247060	.	GGGTGGGTGGGT	.	.	.	END=9247071;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.828891:3,3:3-3,3-3:6,23,0,0:3,6:NULL:223.101:366.612,131.36:0.19802,0.19802:2.50678e-18,0.110301,0.889796	0/0:23:0.959299:3,3:3-3,3-3:8,15,0,0:3,8:NULL:165.037:326.675,113.385:0.0,0.0:1.89467e-24,0.0252493,0.9748
-chr1	9251161	.	AAATAAATAAAT	.	.	.	END=9251172;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.997824:3,3:3-3,3-3:13,21,0,0:3,13:NULL:250.863:366.612,131.36:0.0,0.0:1.0388e-41,0.00169011,0.998315	0/0:26:0.999524:3,3:3-3,3-3:14,12,0,0:3,14:NULL:160.371:326.675,113.385:0.0,0.0:1e-45,0.000271586,0.999729
-chr1	9252401	.	AGAGAGAGAGAG	.	.	.	END=9252412;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:0.999986:6,6:6-6,6-6:19,25,0,5:6,19:4,3|5,2:348.615:366.612,131.36:0.0,0.0:0.0,9.15573e-06,0.999993	0/0:37:1.0:6,6:6-6,6-6:24,13,0,0:6,24:NULL:213.251:326.675,113.385:0.0,0.0:0.0,5.19551e-07,1.0
-chr1	9253812	.	TAAATAAATAAA	.	.	.	END=9253823;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:3,3:3-3,3-3:20,15,0,0:3,20:NULL:216.651:366.612,131.36:0.0,0.0:0.0,5.9982e-06,0.999995	0/0:28:1.0:3,3:3-3,3-3:24,4,0,0:3,24:NULL:130.617:326.675,113.385:0.0,0.0:0.0,2.63531e-07,1.0
-chr1	9257431	.	AGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAG	AGACAGAGACAGAGACAGAGACAG	.	.	END=9257472;RU=agacag;PERIOD=6;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.999995:4,4:4-4,4-4:19,18,0,4:4,19:2,3|3,1:271.847:366.612,131.36:0.0,0.0:1.0,8.86764e-07,0.0	0/0:44:0.999974:7,7:7-7,7-7:18,16,0,10:7,18:4,6|6,4:297.01:326.675,113.385:0.0,0.0:0.0,2.37702e-05,0.999979
-chr1	9258341	.	CTTCCTTCCTTCCTTC	.	.	.	END=9258356;RU=cttc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:24,17,0,0:4,24:NULL:255.707:366.612,131.36:0.0,0.0:0.0,1.40646e-06,1.0	0/0:47:1.0:4,4:4-4,4-4:25,22,0,0:4,25:NULL:303.27:326.675,113.385:0.0,0.0:0.0,5.21673e-07,1.0
-chr1	9260912	.	AAGAAAAGAAAAGAA	.	.	.	END=9260926;RU=aagaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:30,12,0,0:3,30:NULL:231.624:366.612,131.36:0.0,0.0:0.0,3.85823e-09,1.0	0/0:29:1.0:3,3:3-3,3-3:25,4,0,0:3,25:NULL:137.727:326.675,113.385:0.0,0.0:0.0,1.41967e-07,1.0
-chr1	9273522	.	TTGATTGATTGATTGATTGATTGATTGA	.	.	.	END=9273549;RU=ttga;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:1.0:7,7:7-7,7-7:36,23,0,7:7,36:2,3|5,3|6,1:408.576:366.612,131.36:0.0,0.0:0.0,1.05388e-10,1.0	0/0:63:1.0:7,7:7-7,7-7:34,21,0,7:7,34:2,2|3,3|5,1|6,1:399.62:326.675,113.385:0.0,0.0:0.0,1.36727e-09,1.0
-chr1	9274125	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9274170;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:49:0.28917:18,28:18-18,18-30:17,16,0,14:17,2|18,15:5,1|6,1|7,1|9,2|10,2|13,1|15,2|16,1|17,2|28,1:348.667:366.612,131.36:0.0,5.02939:0.00361416,0.996398,7e-45	2/0:44:0.956737:22,23:19-23,23-23:15,14,0,14:21,2|22,5|23,8:5,1|8,2|9,2|10,1|12,1|13,1|16,5|21,1:320.63:326.675,113.385:0.899847,0.39604:5.11288e-07,0.96099,0.0390799
-chr1	9277902	.	ATATATATATATATAT	.	.	.	END=9277917;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.988758:8,8:8-9,8-9:11,11,0,0:8,11:NULL:149.074:366.612,131.36:0.253975,0.253975:2.95112e-15,0.00717039,0.992844	0/0:21:0.999429:8,8:8-8,8-8:15,5,0,0:8,15:NULL:105.87:326.675,113.385:0.0,0.0:8.80438e-21,0.000358104,0.999644
-chr1	9279853	.	ATACATACATACATAC	.	.	.	END=9279868;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:23,18,0,2:4,23:3,2:269.686:366.612,131.36:0.0,0.0:0.0,7.3893e-07,1.0	0/0:38:1.00001:4,4:4-4,4-4:22,12,0,4:4,22:2,2|3,2:224.55:326.675,113.385:0.0,0.0:0.0,8.97549e-07,1.0
-chr1	9281951	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9281994;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.838921:21,21:20-21,20-21:7,10,0,11:21,7:5,1|7,1|10,3|12,1|13,1|14,1|16,2|18,1:207.014:366.612,131.36:0.253975,0.253975:0.911248,0.0888383,1.37494e-05	0/0:43:0.998108:22,22:22-22,22-22:14,11,0,18:22,14:6,1|8,1|9,3|11,2|13,1|14,1|15,2|18,1|19,2|20,2|21,2:309.278:326.675,113.385:0.0,0.0:1.38778e-17,0.000334466,0.999667
-chr1	9282129	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9282164;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:0.276294:24,27:23-25,23-27:5,15,0,15:23,2|24,3:5,1|6,1|9,1|10,1|12,1|15,3|16,1|17,1|18,1|23,3|26,1:284.08:366.612,131.36:0.459943,1.26972:0.0,0.0,1.0	0/0:41:0.989568:18,18:17-18,17-18:19,12,0,8:17,4|18,15:4,1|6,1|9,1|10,1|14,1|16,1|17,1|18,1:261.136:326.675,113.385:0.290354,0.290354:1.77746e-23,0.0103277,0.989694
-chr1	9285357	.	TTTATTTATTTA	.	.	.	END=9285368;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:232.842:366.612,131.36:0.0,0.0:0.0,4.84406e-06,0.999995	0/0:26:1.0:3,3:3-3,3-3:20,6,0,0:3,20:NULL:133.413:326.675,113.385:0.0,0.0:0.0,4.26591e-06,0.999995
-chr1	9286427	.	TTTTATTTTATTTTA	.	.	.	END=9286441;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:20,15,0,2:3,20:2,2:228.55:366.612,131.36:0.0,0.0:0.0,3.13928e-06,1.0	0/0:21:0.989896:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.98:326.675,113.385:0.0,0.0:1.23609e-32,0.00643952,0.993578
-chr1	9289377	.	TATTTATTTATTTATTTATTTATT	TATTTATTTATTTATTTATTTATTTATTTATTTATT	.	.	END=9289400;RU=tatt;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999907:9,9:1-9,1-9:16,18,0,14:9,16:3,1|5,3|6,3|7,3|8,4:326.474:366.612,131.36:3.40502,3.40502:0.0,1.19741e-07,1.0	0/0:20:0.997387:6,6:6-6,6-6:12,4,0,4:6,12:3,2|4,1|5,1:114.495:326.675,113.385:0.0,0.0:1.98832e-30,0.00113359,0.998869
-chr1	9290815	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	.	END=9290852;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:0.967706:19,19:18-19,18-19:15,18,0,13:18,3|19,12:5,1|8,1|9,1|10,2|11,1|13,3|15,1|16,1|17,1|18,1:340.356:366.612,131.36:0.399735,0.399735:1.49956e-12,0.0314958,0.968563	0/0:25:0.655712:19,19:11-20,11-20:5,9,0,8:19,5:5,2|7,1|12,1|14,1|15,1|18,2:166.296:326.675,113.385:3.94512,3.94512:1.10631e-06,0.124407,0.875694
-chr1	9296627	.	ATTAATTAATTA	.	.	.	END=9296638;RU=atta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999935:3,3:3-3,3-3:16,12,0,3:3,16:2,3:190.493:366.612,131.36:0.0,0.0:0.0,3.03256e-05,0.999971	0/0:43:1.00001:3,3:3-3,3-3:21,19,0,3:3,21:2,3:278.445:326.675,113.385:0.0,0.0:0.0,1.42207e-06,1.0
-chr1	9296985	.	AAAGAAAGAAAG	.	.	.	END=9296996;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:25,15,0,0:3,25:NULL:240.218:366.612,131.36:0.0,0.0:0.0,2.7802e-07,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:190.06:326.675,113.385:0.0,0.0:0.0,6.452e-07,1.0
-chr1	9301041	.	TAAATAAATAAA	.	.	.	END=9301052;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.992895:3,3:3-3,3-3:10,11,0,0:3,10:NULL:142.384:366.612,131.36:0.0,0.0:4.71169e-33,0.0039423,0.996067	0/0:28:0.999938:3,3:3-3,3-3:17,9,0,2:3,17:2,2:162.806:326.675,113.385:0.0,0.0:0.0,2.85568e-05,0.999972
-chr1	9302120	.	CACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACA	.	.	END=9302159;RU=ca;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:46:0.938087:18,19:16-19,18-20:10,23,0,10:18,5|19,5:7,1|8,1|11,1|13,1|15,1|16,3|18,1|19,1:334.803:366.612,131.36:0.667418,0.371782:0.997883,0.00212291,4.80765e-08	0/0:49:0.990551:20,20:19-20,19-20:14,18,0,15:19,2|20,12:8,2|10,1|12,2|14,1|15,1|16,4|18,2|19,1|20,1:349.293:326.675,113.385:0.390054,0.390054:4.34398e-19,0.00830726,0.991711
-chr1	9302309	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9302354;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.993142:19,19:18-19,18-19:20,16,0,8:18,3|19,17:6,1|7,1|8,1|10,1|12,1|15,1|16,1|18,1:304.203:366.612,131.36:0.275098,0.275098:1.0,0.0,0.0	0/2:49:0.303115:23,38:23-23,2-39:13,15,0,18:21,2|23,9|24,2:6,1|7,1|8,1|9,1|10,1|12,2|14,1|15,1|16,1|17,1|18,1|20,1|21,1|22,1|25,1|32,1|38,1:361.606:326.675,113.385:0.243733,12.4842:8.54821e-26,9.88519e-09,1.0
-chr1	9307495	.	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA,TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	.	.	END=9307558;RU=taga;PERIOD=4;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:29:0.84055:17,17:16-17,16-17:6,12,0,10:17,6:3,1|5,1|6,1|8,1|13,2|14,2|15,2:211.044:366.612,131.36:0.425627,0.425627:3.8558e-15,0.0676248,0.93247	1/1:36:0.997979:15,15:14-15,14-15:13,9,0,13:15,13:5,1|7,1|8,3|9,3|10,2|13,2|14,1:237.268:326.675,113.385:0.253975,0.253975:0.998922,0.00108148,1.56142e-16
-chr1	9310514	.	ACACACACACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9310563;RU=ac;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.486569:25,25:22-26,22-26:11,10,0,19:24,2|25,7|26,2:8,1|9,2|11,4|13,1|14,1|16,1|17,1|18,1|19,1|20,1|22,1|23,2|24,2:299.975:366.612,131.36:1.02923,1.02923:2.07079e-08,0.0369271,0.963139	0/1:31:0.298027:25,35:24-25,24-35:8,11,0,12:24,2|25,6:5,1|9,2|10,1|11,1|12,1|13,1|15,1|20,1|23,1|24,1|34,1:247.892:326.675,113.385:0.169767,4.95744:5.61813e-11,1.06178e-05,0.999993
-chr1	9314806	.	GTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9314831;RU=gt;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:39:0.768871:23,24:23-24,24-24:9,13,0,17:23,3|24,6:4,1|5,1|6,2|7,1|9,2|10,2|11,3|16,2|17,1|19,1|20,1:301.593:366.612,131.36:0.499975,0.0:0.0,0.0,1.0	0/1:47:0.856598:13,14:13-13,13-14:22,15,0,10:12,3|13,19:4,1|5,2|6,1|8,1|9,1|11,2|12,1|14,1:329.622:326.675,113.385:0.0,0.515422:7.72604e-23,7.13848e-06,0.999994
-chr1	9318491	.	TATATATATATATA	.	.	.	END=9318504;RU=ta;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:7,7:7-7,7-7:26,17,0,0:7,26:NULL:263.698:366.612,131.36:0.0,0.0:5.19875e-33,2.97156e-07,1.0	0/0:20:0.998886:7,7:6-7,6-7:14,5,0,0:7,14:NULL:101.696:326.675,113.385:0.323567,0.323567:2.86529e-18,0.000686551,0.999317
-chr1	9324727	.	TTTTTGTTTTTGTTTTTG	.	.	.	END=9324744;RU=tttttg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.99986:3,3:3-3,3-3:17,12,0,0:3,17:NULL:185.029:366.612,131.36:0.0,0.0:0.0,0.000120491,0.99988	0/0:18:0.996535:3,3:3-3,3-3:11,5,0,2:3,11:2,2:100.743:326.675,113.385:0.0,0.0:3.86184e-38,0.00153338,0.998473
-chr1	9326142	.	TCCCTCCCTCCC	.	.	.	END=9326153;RU=tccc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:26,28,0,0:3,26:NULL:358.283:366.612,131.36:0.0,0.0:0.0,3.30543e-07,1.0	0/0:34:0.999349:3,3:3-3,3-3:14,20,0,0:3,14:NULL:244.48:326.675,113.385:0.0,0.0:0.0,0.000523905,0.999477
-chr1	9328079	.	AAACAAACAAAC	.	.	.	END=9328090;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:24,4,0,2:3,24:2,2:148.846:366.612,131.36:0.0,0.0:0.0,1.27146e-07,1.0	0/0:68:1.0:3,3:3-3,3-3:44,21,0,2:3,44:2,2:371.366:326.675,113.385:0.0,0.0:0.0,1.8272e-13,1.0
-chr1	9332135	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTG,TTTGTTTGTTTGTTTGTTTG	.	.	END=9332150;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:48:1.0:3,5:3-3,5-5:27,21,0,0:3,9|5,18:NULL:331.849:366.612,131.36:0.0,0.0:0.0,1.0,1.0768e-11	0/0:31:0.99967:4,4:4-4,4-4:15,12,0,4:4,15:3,4:197.49:326.675,113.385:0.0,0.0:0.0,0.00013273,0.999871
-chr1	9335058	.	TTTTGTTTTGTTTTG	.	.	.	END=9335072;RU=ttttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:21,11,0,0:3,21:NULL:181.304:366.612,131.36:0.0,0.0:0.0,4.31613e-06,0.999995	0/0:29:1.00001:3,3:3-3,3-3:23,6,0,0:3,23:NULL:145.745:326.675,113.385:0.0,0.0:0.0,6.17845e-07,1.0
-chr1	9336951	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9336970;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999245:4,4:4-4,4-4:14,17,0,2:4,14:2,1|3,1:230.494:366.612,131.36:0.0,0.0:1e-45,0.000526817,0.999476	0/0:26:0.978285:4,4:3-4,3-4:9,12,0,4:4,9:3,4:176.105:326.675,113.385:0.497026,0.497026:4.14237e-29,0.0118562,0.988168
-chr1	9340284	.	TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC	TGCTGCTGCTGCTGCTGCTGCTGCTGC	.	.	END=9340316;RU=tgc;PERIOD=3;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.999971:9,9:9-9,9-9:18,16,0,5:9,18:4,1|6,2|7,1|8,1:264.09:366.612,131.36:0.0,0.0:0.999993,1.10553e-05,4.96732e-40	0/0:27:0.992223:11,11:11-11,11-11:10,9,0,8:11,10:3,1|4,2|7,1|9,1|10,3:192.427:326.675,113.385:0.0,0.0:2.04128e-27,0.00258091,0.997427
-chr1	9346828	.	TCATCATCATCA	.	.	.	END=9346839;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:41,4,0,0:4,41:NULL:195.359:366.612,131.36:0.0,0.0:0.0,2.65167e-12,1.0	0/0:42:1.0:4,4:4-4,4-4:24,18,0,0:4,24:NULL:257.942:326.675,113.385:0.0,0.0:0.0,6.09121e-07,1.0
-chr1	9348812	.	TTTGTTTTGTTTTGT	TTTGT	.	.	END=9348826;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:19:0.0735964:1,1:1-4,1-4:0,19,0,0:NULL:NULL:177.141:366.612,131.36:0.883688,0.883688:0.231507,0.512275,0.256255	0/0:23:0.999229:3,3:3-3,3-3:14,9,0,0:3,14:NULL:141.122:326.675,113.385:0.0,0.0:0.0,0.000509649,0.999492
-chr1	9350228	.	ACAGCGACAGCGACAGCG	ACAGCG	.	.	END=9350245;RU=acagcg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:21:0.165627:1,1:1-2,1-2:0,21,0,0:NULL:NULL:186.527:366.612,131.36:0.311527,0.311527:0.406392,0.475241,0.118464	0/0:44:1.0:3,3:3-3,3-3:25,19,0,0:3,25:NULL:276.894:326.675,113.385:0.0,0.0:0.0,2.46273e-07,1.0
-chr1	9350646	.	TTTGTTTGTTTG	.	.	.	END=9350657;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999568:3,3:3-3,3-3:15,17,0,0:3,15:NULL:219.527:366.612,131.36:0.0,0.0:1e-45,0.00031849,0.999682	0/0:29:0.999998:3,3:3-3,3-3:18,9,0,2:3,18:2,2:163.919:326.675,113.385:0.0,0.0:0.0,9.79155e-06,0.999993
-chr1	9352617	.	TTTGTTTGTTTG	.	.	.	END=9352628;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:31,16,0,0:3,31:NULL:268.199:366.612,131.36:0.0,0.0:0.0,2.12163e-09,1.0	0/0:54:1.0:3,3:3-3,3-3:39,15,0,0:3,39:NULL:292.504:326.675,113.385:0.0,0.0:0.0,1.07657e-11,1.0
-chr1	9360153	.	TTGTTTGTTTGT	.	.	.	END=9360164;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:3-3,3-3:21,16,0,3:3,21:2,3:250.243:366.612,131.36:0.0,0.0:0.0,9.24726e-07,1.0	0/0:35:1.0:3,3:3-3,3-3:24,11,0,0:3,24:NULL:198.994:326.675,113.385:0.0,0.0:0.0,5.31601e-07,1.0
-chr1	9366180	.	TCCCTCCCTCCCTCCC	.	.	.	END=9366195;RU=tccc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999289:4,4:4-4,4-4:15,11,0,0:4,15:NULL:159.697:366.612,131.36:0.0,0.0:0.0,0.00051322,0.999491	0/0:25:1.00001:4,4:4-4,4-4:21,4,0,0:4,21:NULL:122.492:326.675,113.385:0.0,0.0:0.0,3.79849e-06,1.0
-chr1	9384508	.	TGTGTGTGTGTG	TGTGTGTGTG,TGTGTGTGTGTGTG	.	.	END=9384519;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:53:0.99989:5,7:5-5,6-7:29,19,0,4:5,17|6,4|7,8:5,2|6,2:354.905:366.612,131.36:0.0,0.352842:1.35892e-21,1.0,9.49165e-16	0/0:26:0.628284:6,6:5-6,5-6:20,6,0,0:5,4|6,16:NULL:150.794:326.675,113.385:0.44763,0.44763:7.92581e-13,0.371769,0.62828
-chr1	9384520	.	TATATATATATATATATA	TATATATATATATATA	.	.	END=9384537;RU=ta;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.908251:8,8:6-10,6-10:18,21,0,0:8,15|9,3:NULL:276.123:366.612,131.36:0.754427,0.754427:0.908294,0.0918042,1.71562e-14	0/0:22:0.815459:9,9:8-9,8-9:16,6,0,0:8,3|9,13:NULL:131.98:326.675,113.385:0.425627,0.425627:3.99286e-13,0.184457,0.815606
-chr1	9392580	.	CACACACACACACACA	.	.	.	END=9392595;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:8,8:8-8,8-8:26,22,0,3:8,26:4,1|6,1|7,1:333.753:366.612,131.36:0.0,0.0:3.5e-44,1.14853e-07,1.0	0/0:48:1.0:8,8:8-8,8-8:32,12,0,3:8,32:5,2|6,1:259.698:326.675,113.385:0.0,0.0:0.0,1.69574e-09,1.0
-chr1	9394954	.	TTTCTTTTCTTTTCT	.	.	.	END=9394968;RU=tttct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999994:3,3:3-3,3-3:19,10,0,0:3,19:NULL:167.96:366.612,131.36:0.0,0.0:0.0,1.26792e-05,0.999987	0/0:30:0.999975:3,3:3-3,3-3:18,12,0,0:3,18:NULL:178.442:326.675,113.385:0.0,0.0:0.0,3.36197e-05,0.99997
-chr1	9397849	.	TCTCTCTCTCTC	.	.	.	END=9397860;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:6,6:6-6,6-6:38,21,0,0:6,38:NULL:345.738:366.612,131.36:0.0,0.0:0.0,6.80768e-11,1.0	0/0:40:1.0:6,6:6-6,6-6:24,15,0,0:6,24:NULL:235.651:326.675,113.385:0.0990099,0.0990099:0.0,9.29089e-07,1.0
-chr1	9400767	.	GAGGGAGGGAGG	.	.	.	END=9400778;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:60:1.0:3,3:3-3,3-3:33,27,0,0:3,33:NULL:381.784:366.612,131.36:0.0,0.0:0.0,1.46477e-09,1.0	0/0:38:1.00001:3,3:3-3,3-3:21,15,0,2:3,21:2,2:237.819:326.675,113.385:0.0,0.0:0.0,1.35646e-06,1.0
-chr1	9407672	.	ATATATATATATATAT	AT	.	.	END=9407687;RU=at;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.0268074:1,1:1-6,1-6:0,22,0,0:NULL:NULL:205.027:366.612,131.36:1.55644,1.55644:0.381771,0.483122,0.135186	0/0:19:0.986192:8,8:8-9,8-9:10,8,0,0:8,10:NULL:115.125:326.675,113.385:0.345543,0.345543:1.81266e-16,0.00695297,0.993062
-chr1	9413992	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9414011;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.996606:7,7:7-7,7-7:11,10,0,4:7,11:5,1|6,3:166.465:366.612,131.36:0.0,0.0:0.0,7.4379e-05,0.999926	0/0:36:0.999055:5,5:5-5,5-5:13,16,0,7:5,13:2,1|3,3|4,3:248.56:326.675,113.385:0.0,0.0:5.94545e-39,0.000475321,0.999529
-chr1	9418611	.	TTCTTTCTTTCT	.	.	.	END=9418622;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.00001:3,3:3-3,3-3:22,19,0,2:3,22:2,2:271.278:366.612,131.36:0.0,0.0:0.0,1.01741e-06,1.0	0/0:37:1.0:3,3:3-3,3-3:26,11,0,0:3,26:NULL:199.853:326.675,113.385:0.0,0.0:0.0,9.92493e-08,1.0
-chr1	9420278	.	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTT	.	.	END=9420321;RU=tgtt;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:50:0.999993:8,8:8-8,8-8:18,22,0,9:8,18:3,1|5,3|6,1|7,4:343.572:366.612,131.36:0.0990099,0.0990099:1.0,2.31478e-06,0.0	0/0:53:1.0:11,11:11-15,11-15:29,15,0,7:11,29:3,3|5,2|9,1|10,1:313.405:326.675,113.385:1.08025,1.08025:0.0,1.55196e-08,1.0
-chr1	9422121	.	AATAAATAAATA	.	.	.	END=9422132;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999562:3,3:3-3,3-3:14,7,0,0:3,14:NULL:123.654:366.612,131.36:0.0,0.0:1.8e-44,0.000234214,0.999766	0/0:21:0.998933:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.022:326.675,113.385:0.0,0.0:2.4053e-41,0.000576164,0.999424
-chr1	9424740	.	TCTCTTCTCTTCTCT	.	.	.	END=9424754;RU=tctct;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999984:3,3:3-3,3-3:18,16,0,0:3,18:NULL:218.131:366.612,131.36:0.0,0.0:0.0,2.62183e-05,0.999978	0/0:20:0.997447:3,3:3-3,3-3:12,8,0,0:3,12:NULL:121.749:326.675,113.385:0.0,0.0:3.67533e-40,0.00153279,0.998473
-chr1	9431832	.	AAACCAAAACCAAAACCA	.	.	.	END=9431849;RU=aaacca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999845:3,3:3-3,3-3:16,10,0,0:3,16:NULL:156.258:366.612,131.36:0.0,0.0:0.0,0.000104917,0.999896	0/0:25:0.999993:3,3:3-3,3-3:19,6,0,0:3,19:NULL:134.242:326.675,113.385:0.0,0.0:0.0,1.72612e-05,0.999986
-chr1	9435914	.	ACAGAGACAGAGACAGAGACAGAG	.	.	.	END=9435937;RU=acagag;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999917:4,4:3-4,3-4:16,21,0,4:4,16:2,2|3,2:279.521:366.612,131.36:0.374147,0.374147:0.0,6.21351e-05,0.99994	0/0:27:0.999746:4,4:3-4,3-4:15,8,0,3:4,15:2,2|3,1:155.267:326.675,113.385:0.374147,0.374147:7e-45,0.00014349,0.999857
-chr1	9438550	.	AAATCAAATCAAATC	.	.	.	END=9438564;RU=aaatc;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999971:3,3:3-3,3-3:18,19,0,0:3,18:NULL:249.079:366.612,131.36:0.0,0.0:0.0,3.60357e-05,0.999964	0/0:35:1.0:3,3:3-3,3-3:21,14,0,0:3,21:NULL:208.921:326.675,113.385:0.0,0.0:0.0,4.69581e-06,0.999995
-chr1	9440244	.	CCACCACCACCACCACCA	.	.	.	END=9440261;RU=cca;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:6,6:6-6,6-6:19,13,0,5:6,19:4,2|5,3:240.689:366.612,131.36:0.0,0.0:0.0,4.53287e-06,0.999995	0/0:31:1.00001:6,6:6-6,6-6:22,7,0,2:6,22:5,2:161.055:326.675,113.385:0.0,0.0:0.0,8.65582e-07,1.0
-chr1	9440854	.	TTATTATTATTATTA	.	.	.	END=9440868;RU=tta;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.997378:5,5:5-5,5-5:11,10,0,3:5,11:4,3:159.876:366.612,131.36:0.0,0.0:3.52558e-28,0.00105255,0.998952	0/0:15:0.981375:5,5:5-5,5-5:9,4,0,2:5,9:4,2:90.8043:326.675,113.385:0.0,0.0:8.55695e-23,0.00799974,0.992018
-chr1	9442366	.	TCTCTCTCTCTCTC	TCTCTCTCTCTCTCTC	.	.	END=9442379;RU=tc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.983957:8,8:8-9,8-9:10,18,0,0:8,10:NULL:206.99:366.612,131.36:0.46122,0.46122:7.8753e-34,0.00705923,0.992956	0/0:34:0.990911:7,7:6-8,6-8:11,21,0,0:7,11:NULL:231.834:326.675,113.385:0.446534,0.446534:6.00934e-24,0.00629505,0.993721
-chr1	9443711	.	ATACATACATACATAC	.	.	.	END=9443726;RU=atac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.9997:4,4:4-4,4-4:14,18,0,4:4,14:2,1|3,3:250.416:366.612,131.36:0.0,0.0:1.09036e-38,0.000189682,0.999812	0/0:15:0.993713:4,4:4-4,4-4:11,4,0,0:4,11:NULL:78.9:326.675,113.385:0.0,0.0:1.21939e-30,0.00338957,0.996618
-chr1	9444202	.	ACCCACCCACCC	.	.	.	END=9444213;RU=accc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.661794:3,3:2-3,2-3:4,20,0,0:3,4:NULL:195.19:366.612,131.36:0.240494,0.240494:1.39751e-12,0.218393,0.781647	0/0:26:0.991091:3,3:3-3,3-3:10,16,0,0:3,10:NULL:189.381:326.675,113.385:0.0,0.0:1.7653e-30,0.0063046,0.993708
-chr1	9450506	.	GGGTGGGTGGGT	.	.	.	END=9450517;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999723:3,3:3-3,3-3:15,13,0,0:3,15:NULL:178.435:366.612,131.36:0.0,0.0:0.0,0.000165041,0.999835	0/0:23:0.999917:3,3:3-3,3-3:17,6,0,0:3,17:NULL:125.376:326.675,113.385:0.0,0.0:0.0,5.0317e-05,0.999949
-chr1	9452272	.	AAAACAAAACAAAAC	.	.	.	END=9452286;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999909:3,3:3-3,3-3:17,14,0,0:3,17:NULL:198.479:366.612,131.36:0.0,0.0:0.0,5.94196e-05,0.999941	0/0:37:1.0:3,3:3-3,3-3:25,9,0,3:3,25:2,3:202.435:326.675,113.385:0.0,0.0:0.0,8.19423e-08,1.0
-chr1	9459770	.	TCTCTCTCTCTC	.	.	.	END=9459781;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998603:6,6:6-6,6-6:13,12,0,3:6,13:5,3:187.993:366.612,131.36:0.0,0.0:7.18605e-30,0.000555701,0.999447	0/0:21:0.998424:6,6:6-7,6-7:13,7,0,0:6,13:NULL:113.472:326.675,113.385:0.345543,0.345543:2.92193e-30,0.000800413,0.999203
-chr1	9461244	.	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG	.	.	END=9461298;RU=tttgg;PERIOD=5;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:48:0.998204:13,13:12-13,12-13:12,16,0,19:13,12:4,4|6,3|7,1|8,2|9,2|10,3|11,1|12,3:336.703:366.612,131.36:0.35561,0.35561:0.0,7.50168e-05,0.999926	0/0:46:0.988769:11,11:6-11,6-11:10,16,0,19:11,10:3,2|4,2|5,3|6,3|7,5|8,1|9,2|10,1:326.85:326.675,113.385:2.23815,2.23815:4.06269e-27,0.00860565,0.991413
-chr1	9462516	.	ATATATATATATATATATATATATAT	ATATATATATATATATATATATAT	.	.	END=9462541;RU=at;PERIOD=2;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:12:0.0142412:12,12:13-17,13-17:0,10,0,0:NULL:NULL:89.5365:366.612,131.36:1.95664,1.95664:0.118219,0.453785,0.428162	0/0:13:0.79068:13,13:11-14,11-14:7,3,0,0:13,7:NULL:60.1106:326.675,113.385:0.783743,0.783743:1.10101e-07,0.0955401,0.904565
-chr1	9463887	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACA	.	.	END=9463930;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:0.296089:19,22:18-19,18-24:10,14,0,9:18,4|19,6:5,1|6,1|10,1|11,1|17,3|18,1|22,1:257.221:366.612,131.36:0.35561,2.07165:5.98453e-05,0.999941,1.80856e-16	0/0:28:0.738784:22,22:21-22,21-22:5,10,0,12:22,5:4,1|5,2|8,1|9,1|11,1|13,1|16,1|17,1|21,3:208.298:326.675,113.385:0.270063,0.270063:6.73055e-07,0.0717911,0.928307
-chr1	9468830	.	GAGGGAGGGAGG	.	.	.	END=9468841;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:20,21,0,0:3,20:NULL:262.44:366.612,131.36:0.0,0.0:0.0,1.11017e-05,0.999993	0/0:35:1.0:3,3:3-3,3-3:23,12,0,0:3,23:NULL:196.84:326.675,113.385:0.0,0.0:0.0,4.90263e-07,1.0
-chr1	9470692	.	CACACACACACA	.	.	.	END=9470703;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:6,6:6-6,6-6:24,8,0,2:6,24:5,2:184.022:366.612,131.36:0.0,0.0:0.0,2.70614e-07,1.0	0/0:41:1.0:6,6:6-6,6-6:25,11,0,5:6,25:4,3|5,2:239.921:326.675,113.385:0.0,0.0:0.0,1.09519e-07,1.0
-chr1	9471535	.	GAGAGGAGAGGAGAG	.	.	.	END=9471549;RU=gagag;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.679762:3,3:1-3,1-3:4,13,0,0:3,4:NULL:136.237:366.612,131.36:0.390054,0.390054:2.55998e-13,0.199129,0.800916	0/0:6:0.475982:3,3:3-3,3-3:3,3,0,0:3,3:NULL:40.6212:326.675,113.385:0.281439,0.281439:2.60341e-10,0.221156,0.778882
-chr1	9472682	.	ATGAATGAATGA	.	.	.	END=9472693;RU=atga;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.977545:3,3:3-3,3-3:8,13,0,0:3,8:NULL:147.361:366.612,131.36:0.0,0.0:3.09987e-24,0.0139718,0.986059	0/0:22:0.997079:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.437:326.675,113.385:0.0,0.0:7.52693e-33,0.00197559,0.998033
-chr1	9472967	.	TGTGTGTGTGTGTG	.	.	.	END=9472980;RU=tg;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99761:7,7:7-8,7-8:12,11,0,2:7,12:5,1|6,1:161.169:366.612,131.36:0.36513,0.36513:5.2729e-25,0.00114661,0.99886	0/0:22:0.999708:7,7:7-7,7-7:15,5,0,2:7,15:6,2:120.874:326.675,113.385:0.0,0.0:2.76285e-31,0.000108582,0.999894
-chr1	9474757	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	.	END=9474784;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:57:1.0:14,14:14-14,14-14:30,17,0,10:13,2|14,28:8,1|10,1|11,3|12,4|13,1:368.603:366.612,131.36:0.0,0.0:1.7378e-41,3.7235e-07,1.0	0/0:50:0.999638:14,14:13-14,13-14:20,20,0,9:12,2|14,18:5,1|7,1|10,3|13,4:347.548:326.675,113.385:0.294378,0.294378:9.25131e-27,0.000345403,0.999658
-chr1	9475821	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9475866;RU=gt;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.306361:19,29:19-20,19-31:14,17,0,9:18,2|19,9|20,3:6,2|7,1|11,2|16,1|17,1|18,1|29,1:310.496:366.612,131.36:0.35561,4.9792:0.00254241,0.997465,1.18371e-28	0/0:32:0.415505:23,23:21-23,21-23:6,9,0,16:22,2|23,4:5,1|7,1|8,1|9,2|10,1|11,2|14,2|16,1|17,1|18,1|19,1|20,2:246.597:326.675,113.385:0.716027,0.716027:0.000398632,0.510801,0.488861
-chr1	9476189	.	GCAGGCAGGCAG	.	.	.	END=9476200;RU=gcag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:27,12,0,0:3,27:NULL:217.696:366.612,131.36:0.0,0.0:0.0,3.95231e-08,1.0	0/0:34:1.0:3,3:3-3,3-3:19,13,0,2:3,19:2,2:208.939:326.675,113.385:0.0,0.0:0.0,6.78018e-06,0.999994
-chr1	9482508	.	AATTAATTAATTAATTAATT	.	.	.	END=9482527;RU=aatt;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.852369:5,5:5-5,5-5:7,16,0,0:5,7:NULL:175.534:366.612,131.36:0.19802,0.19802:5.761e-20,0.119528,0.880572	0/0:18:0.990887:5,5:5-5,5-5:10,8,0,0:5,10:NULL:112.505:326.675,113.385:0.0,0.0:1.32822e-28,0.00598998,0.994023
-chr1	9482533	.	AAAGAAAGAAAG	.	.	.	END=9482544;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.996445:3,3:3-3,3-3:12,14,0,0:3,12:NULL:176.654:366.612,131.36:0.0,0.0:1.69466e-35,0.00239988,0.997608	0/0:27:0.999906:3,3:3-3,3-3:16,11,0,0:3,16:NULL:162.705:326.675,113.385:0.0,0.0:0.0,5.78138e-05,0.999942
-chr1	9491448	.	AAATAAATAAATAAAT	.	.	.	END=9491463;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.997205:4,4:4-4,4-4:12,3,0,2:4,12:2,1|3,1:90.9731:366.612,131.36:0.0,0.0:9.02464e-38,0.00126858,0.998738	0/0:11:0.987186:4,4:4-4,4-4:10,1,0,0:4,10:NULL:50.208:326.675,113.385:0.0,0.0:6.382e-32,0.00633264,0.993684
-chr1	9496534	.	GAGGGAGGGAGG	.	.	.	END=9496545;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:34,16,0,0:3,34:NULL:275.852:366.612,131.36:0.0,0.0:0.0,1.86609e-10,1.0	0/0:35:1.0:3,3:3-3,3-3:28,7,0,0:3,28:NULL:174.907:326.675,113.385:0.0,0.0:0.0,2.73175e-08,1.0
-chr1	9497089	.	ACCAACCAACCA	.	.	.	END=9497100;RU=acca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:0.999456:3,3:3-3,3-3:16,30,0,0:3,16:NULL:331.528:366.612,131.36:0.0,0.0:0.0,0.000509167,0.999492	0/0:37:1.0:3,3:3-3,3-3:23,14,0,0:3,23:NULL:222.338:326.675,113.385:0.0,0.0:0.0,1.24897e-06,1.0
-chr1	9497489	.	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	ATTATTATTATTATTATTATTATTATTATT	.	.	END=9497533;RU=att;PERIOD=3;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.994666:10,10:9-10,9-10:12,7,0,0:10,12:NULL:118.12:366.612,131.36:0.270063,0.270063:1.0,0.0,0.0	0/0:23:0.875025:15,15:15-15,15-15:6,9,0,8:15,6:4,1|6,2|8,1|10,1|11,1|13,1|14,1:168.58:326.675,113.385:0.29703,0.29703:1.54199e-10,0.051828,0.948252
-chr1	9497958	.	TTTGTTTGTTTG	.	.	.	END=9497969;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:3,3:3-3,3-3:32,11,0,2:3,32:2,2:241.553:366.612,131.36:0.0,0.0:0.0,9.19255e-10,1.0	0/0:32:1.0:3,3:3-3,3-3:26,6,0,0:3,26:NULL:157.936:326.675,113.385:0.0,0.0:0.0,6.28813e-08,1.0
-chr1	9502657	.	ACACACACACAC	.	.	.	END=9502668;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:6,6:6-6,6-6:23,9,0,3:6,23:4,1|5,2:197.511:366.612,131.36:0.0,0.0:0.0,3.19025e-07,1.0	0/0:24:0.999982:6,6:6-6,6-6:18,4,0,2:6,18:4,1|5,1:123.674:326.675,113.385:0.0,0.0:2.646e-42,2.0149e-05,0.99998
-chr1	9504503	.	TGTTTTGTTTTGTTTTGTTT	.	.	.	END=9504522;RU=tgttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:4,4:4-4,4-4:23,11,0,0:4,23:NULL:194.415:366.612,131.36:0.0,0.0:0.0,9.40221e-07,1.0	0/0:22:0.999891:4,4:4-4,4-4:17,5,0,0:4,17:NULL:115.806:326.675,113.385:0.0,0.0:0.0,7.52509e-05,0.999926
-chr1	9508248	.	CAAACAAACAAA	.	.	.	END=9508259;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,10,0,3:3,22:2,2|3,1:200.333:366.612,131.36:0.0,0.0:0.0,3.35221e-07,1.0	0/0:35:0.9997:3,3:3-3,3-3:15,20,0,0:3,15:NULL:240.187:326.675,113.385:0.0,0.0:0.0,0.000252808,0.99975
-chr1	9508516	.	ATAATAATAATAATAATAATAATAATAATAATAATAATA	ATAATAATAATAATAATAATAATAATAATAATAATAATAATA	.	.	END=9508554;RU=ata;PERIOD=3;REF=13.0;EXPTHRESH=13	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.94838:14,14:14-14,14-14:8,4,0,2:14,8:4,1|10,1:88.2184:366.612,131.36:0.0,0.0:9.66214e-16,0.0202783,0.979761	0/0:33:0.91691:13,13:13-14,13-14:8,15,0,9:13,8:3,1|4,3|5,1|7,1|8,2|10,1:246.436:326.675,113.385:0.374147,0.374147:5.2725e-12,0.0673377,0.932756
-chr1	9508833	.	CACACACACACACACACA	.	.	.	END=9508850;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.955873:9,9:8-9,8-9:9,12,0,0:9,9:NULL:146.289:366.612,131.36:0.270063,0.270063:7.22498e-16,0.0326351,0.967427	0/0:27:0.999883:9,9:9-11,9-11:17,7,0,2:9,17:5,1|8,1:149.286:326.675,113.385:0.691086,0.691086:8.54708e-30,4.60868e-05,0.999956
-chr1	9511167	.	TTATTTATTTAT	.	.	.	END=9511178;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.996662:3,3:3-3,3-3:12,8,0,0:3,12:NULL:123.398:366.612,131.36:0.0,0.0:1.32255e-40,0.00211994,0.997889	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:258.692:326.675,113.385:0.0,0.0:0.0,5.52396e-07,1.0
-chr1	9514249	.	TGGATGGATGGATGGA	.	.	.	END=9514264;RU=tgga;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:4,4:4-4,4-4:21,9,0,2:4,21:3,2:178.171:366.612,131.36:0.0,0.0:0.0,2.86383e-06,1.0	0/0:30:0.999927:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:178.978:326.675,113.385:0.0,0.0:0.0,3.8318e-05,0.999963
-chr1	9516045	.	AAAGAAAGAAAG	.	.	.	END=9516056;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999963:3,3:3-3,3-3:17,12,0,0:3,17:NULL:175.375:366.612,131.36:0.0,0.0:0.0,3.04347e-05,0.999971	0/0:20:0.999451:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.773:326.675,113.385:0.0,0.0:0.0,0.000288093,0.999713
-chr1	9516633	.	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	GGGAGGGGAGGGGAGGGGAGGGGAGGGGAG,GGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG	.	.	END=9516692;RU=gggag;PERIOD=5;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.0677191:6,6:5-8,5-8:0,11,0,4:NULL:3,1|4,2|5,1:125.733:366.612,131.36:1.04988,1.04988:1.0,0.0,0.0	2/2:1:0.00037075:8,8:8-8,8-8:0,1,0,0:NULL:NULL:8.16001:326.675,113.385:0.0,0.0:0.0410663,0.409397,0.549689
-chr1	9517848	.	ATTTATTTATTT	ATTTATTT	.	.	END=9517859;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:27:0.998884:2,3:2-2,2-3:12,15,0,0:2,10|3,2:NULL:190.032:366.612,131.36:0.0,0.46122:0.00112286,0.998883,1.13057e-29	0/0:26:0.98931:3,3:3-3,3-3:11,15,0,0:3,11:NULL:186.743:326.675,113.385:0.19802,0.19802:5.67931e-35,0.00761143,0.992408
-chr1	9522426	.	TTTGTTTGTTTG	.	.	.	END=9522437;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,9,0,2:3,21:2,1|3,1:178.619:366.612,131.36:0.0,0.0:0.0,6.71013e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:26,12,0,0:3,26:NULL:216.985:326.675,113.385:0.0,0.0:0.0,1.61937e-07,1.0
-chr1	9525101	.	CACACACACACACACACA	.	.	.	END=9525118;RU=ca;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.990074:9,9:8-9,8-9:17,8,0,2:8,2|9,15:7,1|9,1:166.143:366.612,131.36:0.311527,0.311527:1.00911e-29,0.00990056,0.99012	0/0:28:0.998546:9,9:9-9,9-9:13,12,0,3:9,13:4,2|8,1:190.377:326.675,113.385:0.0,0.0:6.30261e-22,0.000801553,0.999202
-chr1	9525246	.	ATGAATGAATGAATGAATGAATGA	.	.	.	END=9525269;RU=atga;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:6,6:6-6,6-6:27,10,0,2:6,27:3,1|5,1:211.986:366.612,131.36:0.0990099,0.0990099:0.0,4.27536e-08,1.0	0/0:34:0.999832:6,6:5-6,5-6:16,14,0,3:6,16:3,1|5,2:213.876:326.675,113.385:0.345543,0.345543:1e-45,0.000123183,0.999879
-chr1	9525501	.	AAACAAACAAACAAAC	.	.	.	END=9525516;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.99998:4,4:4-4,4-4:18,10,0,6:4,18:2,2|3,4:207.534:366.612,131.36:0.0,0.0:0.0,1.20039e-05,0.999987	0/0:32:0.999956:4,4:4-4,4-4:17,10,0,5:4,17:2,1|3,4:196.242:326.675,113.385:0.0,0.0:0.0,2.47553e-05,0.999978
-chr1	9525744	.	GAGGAGGAGGAG	.	.	.	END=9525755;RU=gag;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.0:4,4:4-4,4-4:23,12,0,0:4,23:NULL:205.735:366.612,131.36:0.0,0.0:0.0,1.90918e-06,1.0	0/0:35:0.999892:4,4:4-4,4-4:16,17,0,2:4,16:3,2:236.803:326.675,113.385:0.0,0.0:0.0,6.3783e-05,0.99994
-chr1	9526193	.	AAACAAACAAACAAAC	.	.	.	END=9526208;RU=aaac;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999704:4,4:4-4,4-4:15,24,0,3:4,15:3,3:303.015:366.612,131.36:0.0,0.0:0.0,0.000129205,0.999872	0/0:22:0.991715:4,4:4-4,4-4:11,11,0,0:4,11:NULL:144.452:326.675,113.385:0.0,0.0:3.33123e-34,0.00610614,0.99391
-chr1	9526390	.	AAATAAATAAAT	.	.	.	END=9526401;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:27,13,0,0:3,27:NULL:222.351:366.612,131.36:0.0,0.0:0.0,3.88531e-08,1.0	0/0:24:0.999751:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.747:326.675,113.385:0.0,0.0:0.0,0.000140297,0.999864
-chr1	9529332	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC	.	.	END=9529373;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.488687:17,18:7-18,7-18:10,10,0,4:16,2|17,2|18,6:10,2|12,1|15,1:172.994:366.612,131.36:4.96592,5.25089:0.99975,0.0002516,4.76555e-21	0/0:35:0.68762:21,21:20-21,20-21:8,14,0,13:20,2|21,6:8,2|10,3|11,1|12,2|13,1|15,2|18,1|20,1:277.011:326.675,113.385:0.382696,0.382696:1.44107e-06,0.28187,0.718132
-chr1	9533361	.	AGAGAGAGAGAG	.	.	.	END=9533372;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:6,6:6-7,6-7:24,11,0,0:6,24:NULL:197.143:366.612,131.36:0.253975,0.253975:0.0,5.50644e-07,1.0	0/0:33:1.0:6,6:6-6,6-6:20,13,0,0:6,20:NULL:193.621:326.675,113.385:0.0,0.0:0.0,8.066e-06,0.999994
-chr1	9533849	.	AAATAAATAAAT	.	.	.	END=9533860;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:22,15,0,0:3,22:NULL:229.092:366.612,131.36:0.0,0.0:0.0,9.41042e-07,1.0	0/0:17:0.994368:3,3:3-3,3-3:11,6,0,0:3,11:NULL:102.525:326.675,113.385:0.0,0.0:1.5121e-35,0.00279059,0.997216
-chr1	9536352	.	CCCACCCACCCA	CCCA	.	.	END=9536363;RU=ccca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.222461:1,1:1-2,1-2:0,41,0,0:NULL:NULL:368.316:366.612,131.36:0.236383,0.236383:0.544329,0.393009,0.0628117	0/0:32:0.999949:3,3:3-3,3-3:17,15,0,0:3,17:NULL:211.421:326.675,113.385:0.0,0.0:0.0,4.53939e-05,0.999956
-chr1	9536489	.	TGGAGCTGGAGCTGGAGC	.	.	.	END=9536506;RU=tggagc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:62:1.0:3,3:3-3,3-3:27,33,0,2:3,27:2,2:415.135:366.612,131.36:0.0,0.0:0.0,4.20734e-08,1.0	0/0:29:1.0:3,3:3-3,3-3:23,4,0,2:3,23:2,2:141.472:326.675,113.385:0.0,0.0:0.0,3.16403e-07,1.0
-chr1	9541751	.	TATATTATATTATAT	.	.	.	END=9541765;RU=tatat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:26,8,0,0:3,26:NULL:175.287:366.612,131.36:0.0,0.0:0.0,9.08982e-08,1.0	0/0:18:0.999729:3,3:3-3,3-3:15,3,0,0:3,15:NULL:84.3241:326.675,113.385:0.0,0.0:1e-45,0.000132508,0.999871
-chr1	9542204	.	TATTTATTTATTTATT	.	.	.	END=9542219;RU=tatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.99959:4,4:4-4,4-4:14,21,0,2:4,14:2,1|3,1:259.97:366.612,131.36:0.0,0.0:2.57224e-40,0.00025296,0.99975	0/0:30:0.999828:4,4:4-4,4-4:16,12,0,2:4,16:3,2:187.136:326.675,113.385:0.0,0.0:3e-45,0.000103024,0.999896
-chr1	9544492	.	AAACAAACAAAC	.	.	.	END=9544503;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999924:3,3:3-3,3-3:17,11,0,0:3,17:NULL:171.571:366.612,131.36:0.0,0.0:0.0,5.20927e-05,0.999949	0/0:29:0.999936:3,3:3-3,3-3:17,12,0,0:3,17:NULL:171.869:326.675,113.385:0.0,0.0:0.0,4.52417e-05,0.999956
-chr1	9544579	.	AAATAAATAAAT	AAATAAATAAATAAAT	.	.	END=9544590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.95751:4,4:4-4,4-4:8,15,0,0:4,8:NULL:169.733:366.612,131.36:0.0,0.0:1.14659e-30,0.0221433,0.9779	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:162.482:326.675,113.385:0.0,0.0:0.0,4.78866e-07,1.0
-chr1	9544631	.	CAAACAAACAAACAAACAAA	CAAACAAACAAA	.	.	END=9544650;RU=caaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.858271:3,3:3-3,3-3:6,8,0,0:3,6:NULL:96.7295:366.612,131.36:0.0,0.0:0.957888,0.0421824,2.13894e-21	0/0:30:0.999989:5,5:5-5,5-5:17,8,0,5:5,17:3,1|4,4:180.185:326.675,113.385:0.0,0.0:4e-45,1.66117e-05,0.999986
-chr1	9550027	.	AGGCAGGCTGAGGCAGGCTGAGGCAGGCTG	.	.	.	END=9550056;RU=aggcaggctg;PERIOD=10;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999978:3,3:3-3,3-3:19,18,0,3:3,19:2,3:258.204:366.612,131.36:0.0,0.0:9.2709e-24,3.21158e-05,0.999971	0/0:22:0.991697:3,3:3-3,3-3:11,11,0,0:3,11:NULL:150.68:326.675,113.385:0.0,0.0:3.84619e-14,0.00708497,0.992933
-chr1	9551002	.	TGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGT	.	.	END=9551022;RU=tgt;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:1.0:5,5:5-5,5-5:18,17,0,2:5,18:4,1|5,1:236.622:366.612,131.36:0.0,0.0:0.999995,5.00637e-06,0.0	0/0:46:1.0:7,7:7-7,7-7:30,12,0,4:7,30:3,1|4,1|5,1|6,1:257.203:326.675,113.385:0.0,0.0:0.0,4.08431e-09,1.0
-chr1	9551523	.	GAAAGAAAGAAA	.	.	.	END=9551534;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:20,17,0,0:3,20:NULL:239.44:366.612,131.36:0.0,0.0:0.0,4.80066e-06,0.999995	0/0:28:1.00001:3,3:3-3,3-3:21,7,0,0:3,21:NULL:147.768:326.675,113.385:0.0,0.0:0.0,1.69865e-06,1.0
-chr1	9553997	.	ACAGACAGACAG	.	.	.	END=9554008;RU=acag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:22,17,0,0:3,22:NULL:243.212:366.612,131.36:0.0,0.0:0.0,1.54342e-06,1.0	0/0:25:0.999424:3,3:3-3,3-3:14,11,0,0:3,14:NULL:155.558:326.675,113.385:0.0,0.0:0.0,0.000310663,0.99969
-chr1	9555100	.	CATACATACATACATA	.	.	.	END=9555115;RU=cata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:4,4:4-4,4-4:21,18,0,3:4,21:2,1|3,2:272.614:366.612,131.36:0.0,0.0:0.0,3.50491e-06,1.0	0/0:43:1.0:4,4:4-4,4-4:28,11,0,4:4,28:3,4:240.061:326.675,113.385:0.0,0.0:0.0,7.57256e-09,1.0
-chr1	9557814	.	AGGCAGGCAGGC	.	.	.	END=9557825;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:46:1.0:3,3:3-3,3-3:24,19,0,3:3,24:2,3:288.198:366.612,131.36:0.0,0.0:0.0,1.93264e-07,1.0	0/0:49:1.0:3,3:3-3,3-3:28,19,0,2:3,28:2,2:303.728:326.675,113.385:0.0,0.0:0.0,2.70369e-08,1.0
-chr1	9559035	.	TTTATTTATTTA	.	.	.	END=9559046;RU=ttta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:3,3:3-3,3-3:19,18,0,0:3,19:NULL:237.608:366.612,131.36:0.0,0.0:0.0,9.02066e-06,0.999994	0/0:29:0.999997:3,3:2-3,2-3:18,8,0,2:3,18:2,2:159.677:326.675,113.385:0.253975,0.253975:0.0,9.92915e-06,0.999993
-chr1	9559216	.	CTATCTATCTAT	.	.	.	END=9559227;RU=ctat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998311:3,3:3-3,3-3:12,13,0,0:3,12:NULL:166.195:366.612,131.36:0.0,0.0:5.86568e-39,0.00103494,0.998968	0/0:20:0.99055:3,3:3-3,3-3:10,10,0,0:3,10:NULL:130.843:326.675,113.385:0.0,0.0:1.5807e-32,0.00583339,0.994181
-chr1	9559239	.	TTTTGTTTTTGTTTTTGTTTTTGT	.	.	.	END=9559262;RU=ttttgt;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.998634:4,4:4-4,4-4:12,9,0,4:4,12:3,4:160.987:366.612,131.36:0.0,0.0:8.31654e-36,0.000721811,0.99928	0/0:24:0.975961:4,4:4-4,4-4:9,12,0,3:4,9:2,2|3,1:166.59:326.675,113.385:0.0,0.0:1.77814e-26,0.0163539,0.983681
-chr1	9561161	.	AAAGAAAGAAAG	.	.	.	END=9561172;RU=aaag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:3,3:3-3,3-3:21,18,0,0:3,21:NULL:251.128:366.612,131.36:0.0,0.0:0.0,3.12008e-06,1.0	0/0:30:0.999957:3,3:3-3,3-3:17,13,0,0:3,17:NULL:178.958:326.675,113.385:0.0,0.0:0.0,3.4985e-05,0.999964
-chr1	9567718	.	ACACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9567759;RU=ac;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:30:0.368352:22,30:22-22,22-31:6,12,0,12:22,6:5,1|9,3|11,1|12,1|15,1|17,1|19,1|20,2|30,1:247.171:366.612,131.36:0.0,4.05102:7.66898e-17,7.24313e-08,1.0	0/0:54:0.998695:21,21:18-21,18-21:16,17,0,18:21,16:4,1|5,1|7,4|8,2|9,2|10,1|11,3|12,1|13,1|16,1|19,1:371.306:326.675,113.385:0.712046,0.712046:2.3557e-18,0.000297949,0.999705
-chr1	9569212	.	GTGGTGGTGGTG	.	.	.	END=9569223;RU=gtg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.997553:4,4:4-4,4-4:12,17,0,2:4,12:3,2:224.309:366.612,131.36:0.0,0.0:7.40471e-33,0.00122997,0.998777	0/0:30:0.991951:4,4:4-4,4-4:11,19,0,0:4,11:NULL:216.225:326.675,113.385:0.0,0.0:2.08963e-30,0.00592683,0.99409
-chr1	9571015	.	AAAGGAAAGGAAAGG	.	.	.	END=9571029;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.984032:3,3:3-3,3-3:10,27,0,0:3,10:NULL:289.309:366.612,131.36:0.0,0.0:5.75521e-33,0.0138028,0.986229	0/0:35:0.999986:3,3:3-3,3-3:19,16,0,0:3,19:NULL:224.53:326.675,113.385:0.0,0.0:0.0,2.13318e-05,0.999979
-chr1	9571032	.	AAAGGAAAGGAAAGG	.	.	.	END=9571046;RU=aaagg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999745:3,3:3-3,3-3:15,22,0,2:3,15:2,2:276.457:366.612,131.36:0.0,0.0:0.0,0.000159529,0.999842	0/0:36:0.999955:3,3:3-3,3-3:17,16,0,3:3,17:2,3:239.298:326.675,113.385:0.0,0.0:0.0,3.66339e-05,0.999964
-chr1	9571264	.	AGATTAGATTAGATTAGATT	.	.	.	END=9571283;RU=agatt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999969:4,4:4-4,4-4:19,17,0,0:4,19:NULL:235.226:366.612,131.36:0.0,0.0:0.0,4.0984e-05,0.999963	0/0:40:1.00001:4,4:4-4,4-4:21,15,0,4:4,21:3,4:246.326:326.675,113.385:0.0,0.0:0.0,1.61577e-06,1.0
-chr1	9571292	.	CATACATACATA	.	.	.	END=9571303;RU=cata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999992:3,3:3-3,3-3:19,17,0,0:3,19:NULL:234.857:366.612,131.36:0.0,0.0:0.0,1.7738e-05,0.999986	0/0:30:0.999841:3,3:3-3,3-3:16,14,0,0:3,16:NULL:188.408:326.675,113.385:0.0,0.0:4.61e-43,0.000103159,0.999896
-chr1	9571354	.	GATTGATTGATT	.	.	.	END=9571365;RU=gatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.995849:3,3:3-3,3-3:11,15,0,2:3,11:2,2:198.858:366.612,131.36:0.0,0.0:5.99504e-37,0.00180972,0.998194	0/0:32:0.999991:3,3:3-3,3-3:18,12,0,2:3,18:2,2:191.128:326.675,113.385:0.0,0.0:0.0,1.34985e-05,0.999987
-chr1	9575481	.	TGGTGGTGGTGG	.	.	.	END=9575492;RU=tgg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:4,4:4-4,4-4:29,21,0,0:4,29:NULL:308.213:366.612,131.36:0.0,0.0:0.0,2.5531e-08,1.0	0/0:51:1.0:4,4:4-4,4-4:28,23,0,0:4,28:NULL:322.028:326.675,113.385:0.0,0.0:0.0,2.93502e-08,1.0
-chr1	9579567	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9579598;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:44:0.286408:16,21:16-16,16-24:18,13,0,13:15,3|16,15:6,1|10,1|11,3|13,3|14,3|15,1|21,1:314.996:366.612,131.36:0.0,3.20612:3.07634e-19,3.561e-05,0.999964	0/0:33:0.865572:16,16:15-16,15-16:18,7,0,8:15,5|16,13:7,2|9,1|11,1|13,2|15,1|16,1:210.355:326.675,113.385:0.442564,0.442564:1.78213e-20,0.13442,0.865673
-chr1	9579965	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9579994;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.881122:15,15:13-17,13-17:6,20,0,13:15,6:4,1|7,2|9,1|10,1|11,3|12,1|13,1|14,2|15,1:306.867:366.612,131.36:1.01087,1.01087:1.33388e-15,0.0251713,0.974879	0/0:25:0.982053:15,15:14-15,14-15:15,3,0,7:14,2|15,13:6,1|10,2|11,1|13,2|14,1:151.138:326.675,113.385:0.236383,0.236383:1.49043e-14,0.0174023,0.982635
-chr1	9579994	.	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	.	.	END=9580031;RU=ga;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:29:0.999525:17,19:16-17,16-19:13,10,0,4:16,3|17,6|19,4:5,3|10,1:195.896:366.612,131.36:0.21692,0.801063:4.20143e-06,0.999996,2.77594e-06	0/0:22:0.999096:19,19:19-19,19-19:15,2,0,5:19,15:15,1|16,1|17,2|18,1:125.664:326.675,113.385:0.0,0.0:2.3307e-29,0.000121848,0.99988
-chr1	9582597	.	CCTCCTCCTCCT	.	.	.	END=9582608;RU=cct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.882089:4,4:4-4,4-4:7,21,0,0:4,7:NULL:219.266:366.612,131.36:0.29703,0.29703:6.7549e-21,0.0953619,0.904739	0/0:31:0.999283:4,4:4-4,4-4:13,16,0,2:4,13:3,2:218.782:326.675,113.385:0.0,0.0:9.46324e-39,0.00046551,0.999537
-chr1	9583195	.	AAATAAATAAATAAAT	.	.	.	END=9583210;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999814:4,4:4-4,4-4:15,13,0,5:4,15:2,1|3,4:206.943:366.612,131.36:0.0,0.0:0.0,8.99761e-05,0.999911	0/0:27:0.999477:4,4:3-5,3-5:14,7,0,4:4,14:3,4:143.282:326.675,113.385:0.633818,0.633818:4.2e-44,0.000160403,0.999842
-chr1	9583659	.	AACCAACCAACC	.	.	.	END=9583670;RU=aacc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.997728:3,3:3-3,3-3:12,15,0,0:3,12:NULL:186.758:366.612,131.36:0.0,0.0:9.2434e-41,0.00143367,0.998572	0/0:31:1.00001:3,3:3-3,3-3:22,9,0,0:3,22:NULL:176.01:326.675,113.385:0.0,0.0:0.0,1.07304e-06,1.0
-chr1	9585234	.	AGAGAGAGAGAG	.	.	.	END=9585245;RU=ag;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:6,6:6-6,6-6:35,15,0,2:6,35:4,1|5,1:293.376:366.612,131.36:0.0,0.0:0.0,1.1327e-10,1.0	0/0:31:0.999978:6,6:6-7,6-7:18,12,0,0:6,18:NULL:181.935:326.675,113.385:0.236383,0.236383:4.664e-42,3.27745e-05,0.99997
-chr1	9587125	.	TAAATAAATAAA	.	.	.	END=9587136;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999965:3,3:3-3,3-3:18,22,0,0:3,18:NULL:276.885:366.612,131.36:0.0,0.0:0.0,2.96693e-05,0.999971	0/0:36:1.0:3,3:3-3,3-3:24,12,0,0:3,24:NULL:204.769:326.675,113.385:0.0,0.0:0.0,4.47188e-07,1.0
-chr1	9588885	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9588932;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:33:0.276794:24,32:24-24,24-32:7,10,0,16:24,7:4,1|6,1|7,2|8,1|9,2|16,2|20,3|21,3|29,1:255.89:366.612,131.36:0.0,3.61865:4.9677e-15,1.70444e-07,1.0	0/0:36:0.776549:24,24:23-25,23-25:9,10,0,16:23,2|24,7:8,2|11,1|12,2|13,2|14,3|15,3|16,1|18,1|21,1:266.77:326.675,113.385:0.532817,0.532817:2.4315e-08,0.173489,0.826583
-chr1	9591730	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9591759;RU=tc;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:6:0.021554:14,14:12-14,12-14:0,2,0,2:NULL:10,1|12,1:34.2186:366.612,131.36:0.947603,0.947603:0.348761,0.49392,0.157365	1/1:8:0.025942:12,12:12-15,12-15:0,5,0,2:NULL:6,1|8,1:58.7703:326.675,113.385:1.46059,1.46059:0.206663,0.496322,0.297103
-chr1	9591759	.	CACACACACACACACA	.	.	.	END=9591774;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:11:0.847064:8,8:8-13,8-13:7,2,0,0:8,7:NULL:47.2816:366.612,131.36:2.19962,2.19962:7.07238e-10,0.0476111,0.952465	0/0:12:0.930569:8,8:7-8,7-8:8,3,0,0:8,8:NULL:59.1515:326.675,113.385:0.35561,0.35561:3.91321e-11,0.0389658,0.961101
-chr1	9591774	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	.	END=9591823;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:8:0.0191554:25,25:25-30,25-30:0,2,0,4:NULL:7,1|10,1|11,1|16,1:50.299:366.612,131.36:0.949876,0.949876:0.0,0.0,1.0	0/0:10:0.178814:25,25:22-25,22-25:2,3,0,4:25,2:5,1|10,1|12,1|17,1:67.505:326.675,113.385:0.707349,0.707349:0.00626058,0.457123,0.53674
-chr1	9600354	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9600391;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.859315:19,19:19-20,19-20:15,12,0,11:18,2|19,11|20,2:8,1|9,1|12,1|13,1|14,3|16,2|17,1|18,1:276.718:366.612,131.36:0.436093,0.436093:2.62061e-13,0.00978464,0.990238	0/1:32:0.849525:19,20:18-19,18-20:13,6,0,12:18,2|19,8|20,3:4,2|6,2|7,1|13,1|14,2|15,1|16,2|18,1:220.619:326.675,113.385:0.169767,0.620058:1.20253e-11,0.00373575,0.996277
-chr1	9600392	.	AGAGAGAGAGAGAGAGAG	.	.	.	END=9600409;RU=ag;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999913:9,9:9-9,9-9:17,11,0,2:9,17:6,1|8,1:188.881:366.612,131.36:0.0,0.0:1.12396e-34,5.29395e-05,0.999949	0/0:32:0.999832:9,9:8-9,8-9:23,7,0,2:8,2|9,21:6,1|9,1:179.499:326.675,113.385:0.195027,0.195027:0.0,0.000174119,0.999827
-chr1	9601375	.	AAGAAAGAAAGAAAGAAAGA	AAGAAAGAAAGAAAGAAAGAAAGA	.	.	END=9601394;RU=aaga;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.999322:6,6:6-6,6-6:14,10,0,4:6,14:2,1|4,1|5,2:177.803:366.612,131.36:0.0,0.0:0.0,6.95015e-05,0.999933	0/0:25:0.999919:5,5:5-5,5-5:17,6,0,2:5,17:2,1|4,1:142.303:326.675,113.385:0.0,0.0:1.65e-43,3.54743e-05,0.999964
-chr1	9606362	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9606389;RU=gt;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.936713:13,13:12-13,12-13:15,21,0,8:12,3|13,12:6,1|8,2|10,1|11,2|12,1|13,1:322.203:366.612,131.36:0.390807,0.390807:0.99962,0.000382853,3.60786e-14	0/0:54:0.999707:14,14:14-14,14-14:27,15,0,11:13,4|14,23:6,1|8,1|9,1|11,1|12,3|13,4:351.894:326.675,113.385:0.139319,0.139319:1.02861e-27,0.000300045,0.999704
-chr1	9608925	.	AAAACAAAACAAAACAAAAC	.	.	.	END=9608944;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.998729:4,4:4-4,4-4:12,9,0,7:4,12:2,1|3,6:179.669:366.612,131.36:0.0,0.0:8.2591e-41,0.000420259,0.999583	0/0:22:0.999873:4,4:4-4,4-4:16,3,0,3:4,16:2,1|3,2:111.98:326.675,113.385:0.0,0.0:0.0,4.67673e-05,0.999956
-chr1	9611150	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	.	END=9611195;RU=tg;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:0.797661:23,23:22-23,22-23:7,22,0,15:23,7:4,1|7,1|9,2|10,1|11,1|16,2|17,2|18,1|19,1|20,1|22,2:357.74:366.612,131.36:0.422855,0.422855:1.38107e-07,0.116839,0.883262	0/0:40:0.994831:23,23:23-24,23-24:13,10,0,15:23,13:4,1|8,1|9,1|10,1|13,1|14,1|16,2|18,2|20,4|22,1:271.859:326.675,113.385:0.344691,0.344691:1.28818e-14,0.00110153,0.9989
-chr1	9612365	.	AAACAAACAAAC	.	.	.	END=9612376;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.0:3,3:3-3,3-3:33,20,0,0:3,33:NULL:315.123:366.612,131.36:0.0,0.0:0.0,6.36956e-10,1.0	0/0:41:1.0:3,3:3-3,3-3:23,18,0,0:3,23:NULL:257.034:326.675,113.385:0.0,0.0:0.0,1.22239e-06,1.0
-chr1	9615067	.	AAGGAAAGGAAAGGA	.	.	.	END=9615081;RU=aagga;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.99992:3,3:3-3,3-3:17,3,0,0:3,17:NULL:97.9314:366.612,131.36:0.0,0.0:0.0,4.50181e-05,0.999956	0/0:20:0.994808:3,3:3-3,3-3:11,9,0,0:3,11:NULL:125.05:326.675,113.385:0.0,0.0:8.87133e-32,0.0033707,0.99664
-chr1	9615435	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9615462;RU=tg;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.691524:19,20:18-20,20-20:10,17,0,14:18,2|19,2|20,6:5,1|6,1|8,1|9,1|10,3|12,2|13,1|14,1|16,1|19,2:319.502:366.612,131.36:0.800696,0.19802:0.0,0.0,1.0	0/0:43:0.988039:14,14:13-14,13-14:17,8,0,16:13,3|14,14:5,2|6,4|7,2|8,1|9,2|10,1|11,2|12,2:282.1:326.675,113.385:0.284901,0.284901:8.18095e-17,0.0116994,0.988324
-chr1	9615830	.	ACACACACACACACAC	ACACACACACACACACACACACACACACACAC	.	.	END=9615845;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.995308:16,16:16-16,16-16:12,20,0,4:16,12:5,1|6,1|12,1|14,1:265.114:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:41:1.0:8,8:8-8,8-8:25,14,0,0:8,25:NULL:232.466:326.675,113.385:0.0990099,0.0990099:2.2519e-41,6.3841e-07,1.0
-chr1	9618148	.	GTTTTGTGTTTTGTGTTTTGT	.	.	.	END=9618168;RU=gttttgt;PERIOD=7;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999203:3,3:3-3,3-3:14,10,0,0:3,14:NULL:143.662:366.612,131.36:0.0,0.0:3e-44,0.000537251,0.999468	0/0:32:0.999542:3,3:3-3,3-3:15,17,0,0:3,15:NULL:215.623:326.675,113.385:0.0,0.0:0.0,0.000414123,0.99959
-chr1	9618314	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9618343;RU=ct;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:25:0.977343:8,17:8-17,17-17:7,13,0,3:8,2|17,5:6,1|8,1|15,1:183.5:366.612,131.36:1.70101,0.0990099:1.20571e-18,1.0,2.71908e-08	0/0:28:0.398018:15,15:6-16,6-16:7,9,0,9:14,2|15,5:4,3|5,2|6,1|7,1|12,2:195.299:326.675,113.385:4.2295,4.2295:1.62833e-05,0.564795,0.435288
-chr1	9622730	.	CCATCCATCCAT	.	.	.	END=9622741;RU=ccat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.0:3,3:3-3,3-3:19,21,0,0:3,19:NULL:267.1:366.612,131.36:0.0,0.0:0.0,8.51368e-06,0.999994	0/0:39:0.449397:3,3:2-3,2-3:20,17,0,2:2,2|3,18:2,2:263.617:326.675,113.385:0.484441,0.484441:0.0,0.550717,0.449392
-chr1	9623134	.	AAACAAACAAAC	.	.	.	END=9623145;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.0:3,3:3-3,3-3:27,22,0,0:3,27:NULL:308.672:366.612,131.36:0.0,0.0:0.0,3.99432e-08,1.0	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:247.555:326.675,113.385:0.0,0.0:0.0,1.54894e-07,1.0
-chr1	9626974	.	TGTGTGTGTGTG	.	.	.	END=9626985;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999554:6,6:6-6,6-6:15,12,0,0:6,15:NULL:165.631:366.612,131.36:0.0,0.0:8.9785e-38,0.000244724,0.999758	0/0:22:0.997736:6,6:6-6,6-6:12,8,0,2:6,12:4,2:138.635:326.675,113.385:0.0,0.0:2.33487e-30,0.00106104,0.998944
-chr1	9629064	.	ACACACACACACAC	.	.	.	END=9629077;RU=ac;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:0.999739:7,7:7-7,7-7:15,27,0,0:7,15:NULL:303.9:366.612,131.36:0.0,0.0:1.9304e-36,0.000198213,0.999804	0/0:39:1.00001:7,7:7-7,7-7:22,17,0,0:7,22:NULL:239.609:326.675,113.385:0.0,0.0:0.0,2.05518e-06,1.0
-chr1	9630961	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9630988;RU=tc;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:11:0.0278896:21,21:21-25,21-25:0,7,0,2:NULL:10,1|17,1:77.7278:366.612,131.36:0.885682,0.885682:0.0,0.0,1.0	0/0:20:0.911054:14,14:12-15,12-15:8,7,0,2:14,8:8,1|13,1:116.934:326.675,113.385:0.670203,0.670203:4.68467e-11,0.036892,0.963175
-chr1	9632449	.	TATTTATTTATT	.	.	.	END=9632460;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99891:3,3:3-3,3-3:13,18,0,0:3,13:NULL:219.01:366.612,131.36:0.0,0.0:5.5e-44,0.000874406,0.999127	0/0:23:0.999721:3,3:3-3,3-3:15,8,0,0:3,15:NULL:131.398:326.675,113.385:0.0,0.0:0.0,0.000167424,0.999834
-chr1	9638514	.	ACATACATACAT	.	.	.	END=9638525;RU=acat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:3,3:3-3,3-3:24,17,0,0:3,24:NULL:253.993:366.612,131.36:0.0,0.0:0.0,3.71575e-07,1.0	0/0:44:1.0:3,3:3-3,3-3:27,13,0,4:3,27:2,4:249.201:326.675,113.385:0.0,0.0:0.0,1.83583e-08,1.0
-chr1	9640123	.	TAAATAAATAAA	.	.	.	END=9640134;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:69:1.0:3,3:3-3,3-3:48,20,0,0:3,48:NULL:378.221:366.612,131.36:0.0,0.0:0.0,5.36149e-14,1.0	0/0:54:1.0:3,3:3-3,3-3:30,24,0,0:3,30:NULL:334.737:326.675,113.385:0.0,0.0:0.0,9.27498e-09,1.0
-chr1	9643772	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9643803;RU=gt;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:43:0.99998:17,18:17-17,18-18:21,14,0,6:16,2|17,11|18,8:6,1|10,1|11,1|14,1|16,1|18,1:283.602:366.612,131.36:0.220506,0.0990099:0.0,1.0533e-10,1.0	1/0:35:0.76529:14,16:10-16,16-16:14,11,0,8:13,2|14,2|15,2|16,8:5,1|7,1|8,1|10,1|11,1|12,1|13,1|14,1:240.834:326.675,113.385:1.4234,0.60323:8.8141e-09,0.975704,0.0243449
-chr1	9646643	.	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA,GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	.	.	END=9646702;RU=gata;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.255423:14,14:9-14,9-14:3,12,0,6:14,3:3,1|5,1|6,1|7,1|8,1|13,1:164.828:366.612,131.36:1.61079,1.61079:0.876379,0.123719,5.4977e-07	0/2:18:0.314643:15,17:15-15,15-20:5,7,0,6:15,5:4,1|6,1|7,1|12,1|14,1|17,1:138.479:326.675,113.385:0.0,1.42485:3.16289e-17,5.02754e-08,1.0
-chr1	9647869	.	AAAACAAAACAAAAC	.	.	.	END=9647883;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999978:3,3:3-3,3-3:19,19,0,0:3,19:NULL:252.99:366.612,131.36:0.0,0.0:0.0,3.05267e-05,0.999971	0/0:42:1.0:3,3:3-3,3-3:29,13,0,0:3,29:NULL:236.008:326.675,113.385:0.0,0.0:0.0,1.02047e-08,1.0
-chr1	9648036	.	CACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9648079;RU=ca;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:41:0.521603:27,27:26-27,26-27:4,16,0,20:27,4:7,1|8,2|9,1|12,2|13,2|14,1|15,1|16,3|17,2|19,3|20,2:326.497:366.612,131.36:0.508722,0.508722:0.0,0.0,1.0	0/0:56:0.953332:22,22:21-22,21-22:17,20,0,19:21,5|22,12:5,3|6,1|9,3|10,1|13,1|14,1|15,3|16,1|17,1|18,1|19,1|21,1|22,1:429.358:326.675,113.385:0.298675,0.298675:1.24157e-18,0.0456814,0.954391
-chr1	9648525	.	AACAACAACAACAAC	.	.	.	END=9648539;RU=aac;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:5,5:5-5,5-5:25,18,0,3:5,25:4,3:283.272:366.612,131.36:0.139319,0.139319:0.0,1.49358e-07,1.0	0/0:31:0.999979:5,5:5-5,5-5:18,11,0,2:5,18:4,2:186.423:326.675,113.385:0.0,0.0:0.0,1.53856e-05,0.999986
-chr1	9649233	.	AGCAGCAGCAGCAGCAGC	.	.	.	END=9649250;RU=agc;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:6,6:6-6,6-6:29,10,0,0:6,29:NULL:210.823:366.612,131.36:0.0,0.0:0.0,9.54899e-09,1.0	0/0:33:1.0:6,6:6-6,6-6:24,5,0,4:6,24:5,4:171.0:326.675,113.385:0.0,0.0:0.0,1.31746e-07,1.0
-chr1	9649872	.	AGACAGACAGAC	.	.	.	END=9649883;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999951:3,3:3-3,3-3:17,15,0,0:3,17:NULL:206.542:366.612,131.36:0.0,0.0:0.0,3.27145e-05,0.999971	0/0:40:1.00001:3,3:3-3,3-3:22,18,0,0:3,22:NULL:246.077:326.675,113.385:0.0,0.0:0.0,1.99257e-06,1.0
-chr1	9650822	.	AGGCAGGCAGGC	.	.	.	END=9650833;RU=aggc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:26,14,0,2:3,26:2,2:252.446:366.612,131.36:0.0,0.0:0.0,6.37642e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:241.716:326.675,113.385:0.0,0.0:0.0,2.43994e-08,1.0
-chr1	9653697	.	AATTAATTAATT	.	.	.	END=9653708;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:163.635:366.612,131.36:0.0,0.0:0.0,5.9558e-06,0.999995	0/0:35:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:210.987:326.675,113.385:0.0,0.0:0.0,1.87657e-06,1.0
-chr1	9654181	.	ACACACACACACACAC	.	.	.	END=9654196;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.00001:8,8:6-8,6-8:23,15,0,2:8,23:5,1|6,1:243.973:366.612,131.36:0.451337,0.451337:2.0842e-41,1.49445e-06,1.0	0/0:39:0.998193:8,8:8-9,8-9:29,6,0,4:8,26|9,3:5,2|6,1|7,1:220.67:326.675,113.385:0.345543,0.345543:0.0,1.40534e-08,1.0
-chr1	9654418	.	TGTTTGTTTGTT	.	.	.	END=9654429;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:27,24,0,0:3,27:NULL:331.579:366.612,131.36:0.0,0.0:0.0,9.52743e-08,1.0	0/0:41:1.0:3,3:3-3,3-3:25,16,0,0:3,25:NULL:246.432:326.675,113.385:0.0,0.0:0.0,3.09154e-07,1.0
-chr1	9657317	.	TAGGTAGGTAGGTAGG	.	.	.	END=9657332;RU=tagg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999952:4,4:4-4,4-4:18,13,0,0:4,18:NULL:197.062:366.612,131.36:0.0,0.0:0.0,5.66923e-05,0.999947	0/0:29:1.00001:4,4:4-4,4-4:21,8,0,0:4,21:NULL:158.96:326.675,113.385:0.0,0.0:0.0,3.75096e-06,1.0
-chr1	9657503	.	GTGTGTGTGTGTGTGTGT	.	.	.	END=9657520;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999909:9,9:9-10,9-10:17,11,0,3:9,17:6,1|8,2:198.971:366.612,131.36:0.169767,0.169767:6.39357e-30,4.71416e-05,0.999955	0/0:32:0.9955:9,9:8-10,8-10:22,5,0,4:8,2|9,18|10,2:5,2|8,2:180.788:326.675,113.385:0.487064,0.487064:2.29285e-31,0.000320013,0.999682
-chr1	9657524	.	GACAGACAGACA	.	.	.	END=9657535;RU=gaca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:3,3:3-4,3-4:21,10,0,2:3,21:2,2:193.092:366.612,131.36:0.334882,0.334882:0.0,1.46363e-06,1.0	0/0:30:1.0:3,3:3-3,3-3:23,5,0,2:3,23:2,2:150.605:326.675,113.385:0.0,0.0:0.0,3.26794e-07,1.0
-chr1	9658926	.	CCCACCCCCACCCCCACC	.	.	.	END=9658943;RU=cccacc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.902147:3,3:3-3,3-3:7,25,0,0:3,7:NULL:252.469:366.612,131.36:0.278639,0.278639:4.55821e-21,0.0822109,0.917883	0/0:27:0.951281:3,3:3-3,3-3:8,19,0,0:3,8:NULL:214.396:326.675,113.385:0.19802,0.19802:5.9391e-24,0.0431802,0.95689
-chr1	9659382	.	GGTTGGTTGGTTGGTT	.	.	.	END=9659397;RU=ggtt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:4,4:4-4,4-4:25,21,0,5:4,25:2,1|3,4:322.734:366.612,131.36:0.0,0.0:0.0,1.41532e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:27,14,0,0:4,27:NULL:235.149:326.675,113.385:0.0,0.0:0.0,8.22004e-08,1.0
-chr1	9660032	.	AATTAATTAATT	AATTAATT	.	.	END=9660043;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:17:1.0:2,3:2-3,1-3:4,13,0,0:2,2|3,2:NULL:139.697:366.612,131.36:0.309,0.439006:2.25175e-06,1.0,1.67431e-06	0/0:12:0.962574:3,3:3-3,3-3:8,4,0,0:3,8:NULL:69.585:326.675,113.385:0.0,0.0:3.78813e-27,0.0192602,0.980778
-chr1	9661858	.	TATTTATTTATT	.	.	.	END=9661869;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:21,15,0,0:3,21:NULL:223.698:366.612,131.36:0.0,0.0:0.0,2.98853e-06,1.0	0/0:33:0.999909:3,3:3-3,3-3:16,13,0,4:3,16:2,4:212.817:326.675,113.385:0.0,0.0:0.0,5.11926e-05,0.999949
-chr1	9663095	.	CTTCTTCTTCTTCTT	.	.	.	END=9663109;RU=ctt;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:5,5:4-5,4-5:20,8,0,3:5,20:3,1|4,2:176.232:366.612,131.36:0.169767,0.169767:0.0,3.18149e-06,1.0	0/0:37:1.00001:5,5:5-5,5-5:21,16,0,0:5,21:NULL:225.4:326.675,113.385:0.0,0.0:0.0,3.45165e-06,1.0
-chr1	9667084	.	GTGGGTGGGTGG	.	.	.	END=9667095;RU=gtgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:3,3:3-3,3-3:21,18,0,2:3,21:2,2:262.453:366.612,131.36:0.0,0.0:0.0,1.76325e-06,1.0	0/0:64:1.0:3,3:3-3,3-3:45,16,0,3:3,45:2,3:346.008:326.675,113.385:0.0,0.0:0.0,9.71045e-14,1.0
-chr1	9670565	.	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	AGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGAC	.	.	END=9670612;RU=agagac;PERIOD=6;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:44:0.993949:9,9:9-9,9-9:10,23,0,11:9,10:3,1|4,2|5,2|6,2|7,2|8,2:338.596:366.612,131.36:0.0,0.0:0.0,0.00211497,0.99789	0/0:47:0.999883:8,8:8-8,8-8:16,20,0,11:8,16:2,1|3,2|4,4|5,1|7,3:323.809:326.675,113.385:0.0,0.0:1e-45,8.4119e-05,0.999918
-chr1	9671049	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9671068;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.00001:4,4:4-4,4-4:21,10,0,8:4,21:2,2|3,6:229.649:366.612,131.36:0.0,0.0:0.0,1.28719e-06,1.0	0/0:28:0.999895:4,4:4-4,4-4:16,8,0,4:4,16:3,4:168.625:326.675,113.385:0.0,0.0:0.0,5.65325e-05,0.999947
-chr1	9677855	.	AATTAATTAATT	.	.	.	END=9677866;RU=aatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.980491:3,3:3-3,3-3:9,13,0,0:3,9:NULL:154.314:366.612,131.36:0.0,0.0:7.7152e-31,0.0108427,0.98918	0/0:24:0.999993:3,3:3-3,3-3:19,5,0,0:3,19:NULL:121.778:326.675,113.385:0.0,0.0:0.0,1.26746e-05,0.999987
-chr1	9679931	.	TTAATTAATTAA	.	.	.	END=9679942;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.0:3,3:3-3,3-3:19,11,0,0:3,19:NULL:170.439:366.612,131.36:0.0,0.0:0.0,1.05695e-05,0.999993	0/0:23:0.999972:3,3:3-3,3-3:18,5,0,0:3,18:NULL:119.233:326.675,113.385:0.0,0.0:0.0,2.05989e-05,0.999979
-chr1	9680037	.	AAATAAATAAAT	.	.	.	END=9680048;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:1.00001:3,3:3-3,3-3:20,8,0,2:3,20:2,2:161.662:366.612,131.36:0.0,0.0:0.0,2.71179e-06,1.0	0/0:15:0.920147:3,3:3-3,3-3:7,8,0,0:3,7:NULL:101.501:326.675,113.385:0.0,0.0:1.12079e-23,0.0432247,0.956847
-chr1	9682805	.	TTTGTTTTGTTTTGT	.	.	.	END=9682819;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:20,23,0,0:3,20:NULL:290.035:366.612,131.36:0.0,0.0:0.0,7.31982e-06,0.999994	0/0:37:1.00001:3,3:3-3,3-3:22,12,0,3:3,22:2,3:212.141:326.675,113.385:0.0,0.0:0.0,9.4052e-07,1.0
-chr1	9683361	.	AAAACAAAACAAAAC	.	.	.	END=9683375;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:196.245:366.612,131.36:0.0,0.0:0.0,1.84855e-06,1.0	0/0:43:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:256.143:326.675,113.385:0.0,0.0:0.0,5.61949e-08,1.0
-chr1	9687633	.	TCTTCTTCTTCT	.	.	.	END=9687644;RU=tct;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:4,4:4-4,4-4:31,21,0,2:4,31:3,2:326.845:366.612,131.36:0.0,0.0:0.0,2.87601e-09,1.0	0/0:44:1.0:4,4:4-4,4-4:20,22,0,2:4,20:3,2:285.82:326.675,113.385:0.0,0.0:0.0,6.53391e-06,0.999994
-chr1	9687930	.	CAACAACAACAACAA	.	.	.	END=9687944;RU=caa;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:5,5:5-5,5-5:20,15,0,2:5,20:4,2:235.364:366.612,131.36:0.0,0.0:0.0,4.26737e-06,0.999995	0/0:31:1.00001:5,5:5-5,5-5:22,7,0,2:5,22:4,2:168.444:326.675,113.385:0.0,0.0:0.0,1.00261e-06,1.0
-chr1	9688759	.	ATTATTATTATT	.	.	.	END=9688770;RU=att;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999995:4,4:4-4,4-4:20,19,0,0:4,20:NULL:251.938:366.612,131.36:0.0,0.0:0.0,1.41438e-05,0.999987	0/0:33:1.0:4,4:4-4,4-4:23,10,0,0:4,23:NULL:181.887:326.675,113.385:0.0,0.0:0.0,1.26347e-06,1.0
-chr1	9688938	.	TTTGTTTGTTTG	.	.	.	END=9688949;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.991918:3,3:3-3,3-3:10,11,0,0:3,10:NULL:140.402:366.612,131.36:0.0,0.0:7.14483e-34,0.00501164,0.995002	0/0:34:1.00001:3,3:3-3,3-3:22,12,0,0:3,22:NULL:193.646:326.675,113.385:0.0,0.0:0.0,1.62571e-06,1.0
-chr1	9689761	.	ACACACACACACACACACAC	.	.	.	END=9689780;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:0.999987:10,10:10-10,10-10:26,21,0,5:9,2|10,24:5,2|7,1|8,1|9,1:350.776:366.612,131.36:0.0990099,0.0990099:2.1023e-36,1.42608e-05,0.999987	0/0:57:0.999991:10,10:10-10,10-10:32,12,0,12:9,2|10,28|11,2:4,1|5,2|6,4|7,4|9,1:354.602:326.675,113.385:0.430892,0.430892:2.5e-44,2.95574e-07,1.0
-chr1	9691108	.	ATTTATTTATTT	.	.	.	END=9691119;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999878:3,3:3-3,3-3:16,10,0,0:3,16:NULL:149.003:366.612,131.36:0.0,0.0:0.0,6.04867e-05,0.999941	0/0:19:0.999853:3,3:3-3,3-3:16,3,0,0:3,16:NULL:89.7674:326.675,113.385:0.0,0.0:0.0,6.84543e-05,0.999933
-chr1	9691851	.	AGTAAGTAAGTAAGTA	.	.	.	END=9691866;RU=agta;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.00001:4,4:4-4,4-4:22,17,0,5:4,22:3,5:279.691:366.612,131.36:0.0,0.0:0.0,5.4925e-07,1.0	0/0:31:1.0:4,4:4-4,4-4:20,9,0,2:4,20:3,2:177.721:326.675,113.385:0.0,0.0:0.0,4.7318e-06,0.999995
-chr1	9694314	.	ATACATACATAC	.	.	.	END=9694325;RU=atac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.00001:3,3:3-3,3-3:22,13,0,2:3,22:2,2:219.473:366.612,131.36:0.0,0.0:0.0,1.13225e-06,1.0	0/0:38:1.0:3,3:3-3,3-3:25,11,0,2:3,25:2,2:208.619:326.675,113.385:0.0,0.0:0.0,7.87691e-08,1.0
-chr1	9695885	.	AAATAAATAAAT	.	.	.	END=9695896;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-4,3-4:20,20,0,3:3,20:2,3:284.861:366.612,131.36:0.345543,0.345543:0.0,6.69801e-06,0.999994	0/0:34:1.00001:3,3:3-3,3-3:21,13,0,0:3,21:NULL:201.333:326.675,113.385:0.0,0.0:0.0,3.61883e-06,1.0
-chr1	9696536	.	AAATAAATAAAT	.	.	.	END=9696547;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:33,19,0,0:3,33:NULL:306.625:366.612,131.36:0.0,0.0:0.0,6.52315e-10,1.0	0/0:25:1.0:3,3:3-3,3-3:20,5,0,0:3,20:NULL:122.673:326.675,113.385:0.0,0.0:0.0,5.87155e-06,0.999995
-chr1	9699257	.	ACAACAACAACA	.	.	.	END=9699268;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.00001:4,4:4-4,4-4:21,5,0,3:4,21:3,3:152.568:366.612,131.36:0.0,0.0:0.0,1.1249e-06,1.0	0/0:39:1.0:4,4:4-4,4-4:25,11,0,3:4,25:3,3:222.319:326.675,113.385:0.0,0.0:0.0,1.11363e-07,1.0
-chr1	9703468	.	AAACAAACAAAC	.	.	.	END=9703479;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999994:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.066:366.612,131.36:0.0,0.0:0.0,1.17266e-05,0.999987	0/0:19:0.996173:3,3:3-3,3-3:11,6,0,2:3,11:2,2:112.545:326.675,113.385:0.0,0.0:4.16261e-36,0.00136399,0.998641
-chr1	9703640	.	TTGTTGTTGTTG	.	.	.	END=9703651;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.00001:4,4:4-4,4-4:22,16,0,0:4,22:NULL:234.651:366.612,131.36:0.0,0.0:0.0,1.66171e-06,1.0	0/0:25:1.0:4,4:4-4,4-4:20,5,0,0:4,20:NULL:125.859:326.675,113.385:0.0,0.0:0.0,9.80125e-06,0.999993
-chr1	9704060	.	TGGTTTTGGTTTTGGTTT	.	.	.	END=9704077;RU=tggttt;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999932:3,3:3-3,3-3:17,13,0,0:3,17:NULL:184.213:366.612,131.36:0.0,0.0:0.0,5.85795e-05,0.999941	0/0:29:1.0:3,3:3-3,3-3:20,9,0,0:3,20:NULL:162.201:326.675,113.385:0.0,0.0:0.0,5.56269e-06,0.999995
-chr1	9705815	.	GTTTGTTTGTTTGTTT	.	.	.	END=9705830;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.674159:4,4:2-4,2-4:5,15,0,0:4,5:NULL:158.217:366.612,131.36:0.477306,0.477306:2.98968e-17,0.236009,0.764015	0/0:26:0.999993:4,4:4-4,4-4:19,7,0,0:4,19:NULL:141.001:326.675,113.385:0.0,0.0:0.0,1.56908e-05,0.999986
-chr1	9710499	.	AAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAAC	.	.	END=9710522;RU=aaac;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.998341:4,4:4-4,4-4:12,12,0,4:4,12:3,4:185.253:366.612,131.36:0.0,0.0:0.999477,0.000525053,2.34701e-38	0/0:28:0.999938:6,6:6-6,6-6:18,7,0,3:6,18:2,2|3,1:160.473:326.675,113.385:0.0,0.0:0.0,4.24882e-05,0.999957
-chr1	9710692	.	TTTGTTTGTTTG	.	.	.	END=9710703;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.99993:3,3:3-3,3-3:17,9,0,0:3,17:NULL:144.914:366.612,131.36:0.0,0.0:0.0,3.98414e-05,0.999963	0/0:27:1.0:3,3:3-3,3-3:20,7,0,0:3,20:NULL:139.644:326.675,113.385:0.0,0.0:0.0,4.75786e-06,0.999995
-chr1	9710885	.	ATTTATTTATTTATTT	.	.	.	END=9710900;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.71043:4,4:3-4,3-4:5,17,0,4:4,5:2,2|3,2:205.355:366.612,131.36:0.253975,0.253975:2.75459e-15,0.174742,0.825328	0/0:28:0.999157:4,4:4-4,4-4:13,10,0,5:4,13:3,5:177.402:326.675,113.385:0.0,0.0:4.21589e-40,0.000347666,0.999653
-chr1	9712334	.	TAAATAAATAAATAAATAAA	.	.	.	END=9712353;RU=taaa;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999998:5,5:5-5,5-5:18,14,0,6:5,18:3,1|4,5:247.198:366.612,131.36:0.0,0.0:2.5e-44,1.03477e-05,0.999993	0/0:22:0.991102:5,5:5-5,5-5:10,10,0,2:5,10:4,2:149.796:326.675,113.385:0.0,0.0:1.02584e-24,0.00490215,0.995108
-chr1	9712678	.	TGTATGTATGTA	.	.	.	END=9712689;RU=tgta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:27,24,0,0:3,27:NULL:331.077:366.612,131.36:0.0,0.0:0.0,4.25356e-08,1.0	0/0:31:1.0:3,3:3-3,3-3:23,8,0,0:3,23:NULL:161.328:326.675,113.385:0.0,0.0:0.0,6.61577e-07,1.0
-chr1	9712838	.	GGCTGGCTGGCT	.	.	.	END=9712849;RU=ggct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:49:1.00001:3,3:3-3,3-3:21,25,0,3:3,21:2,3:333.27:366.612,131.36:0.0,0.0:0.0,1.0754e-06,1.0	0/0:30:1.00001:3,3:3-3,3-3:21,9,0,0:3,21:NULL:160.56:326.675,113.385:0.0,0.0:0.0,2.80029e-06,1.0
-chr1	9713883	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9713918;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:42:0.783324:29,30:29-30,29-30:5,16,0,21:29,2|30,3:4,1|5,1|6,1|8,1|9,2|10,1|12,1|13,1|14,1|15,1|16,1|18,1|19,4|24,1|25,1|27,1|28,1:338.818:366.612,131.36:0.582057,0.585081:0.0,0.0,1.0	0/0:35:0.634928:18,18:17-18,17-18:11,11,0,13:17,3|18,8:6,2|8,1|10,1|11,2|12,1|13,1|14,2|16,2|18,1:256.984:326.675,113.385:0.45695,0.45695:1.01629e-14,0.360848,0.639196
-chr1	9719437	.	TAAATAAATAAA	.	.	.	END=9719448;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:52:1.0:3,3:3-3,3-3:29,21,0,2:3,29:2,2:321.514:366.612,131.36:0.0,0.0:0.0,7.19871e-09,1.0	0/0:34:1.0:3,3:3-3,3-3:23,11,0,0:3,23:NULL:188.708:326.675,113.385:0.0,0.0:0.0,3.85455e-07,1.0
-chr1	9725821	.	AAACAAACAAACAAACAAAC	.	.	.	END=9725840;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.98873:5,5:5-5,5-5:10,9,0,0:5,10:NULL:120.746:366.612,131.36:0.0,0.0:6.68574e-36,0.00721016,0.992806	0/0:26:0.999871:5,5:5-5,5-5:16,5,0,5:5,16:2,2|3,1|4,2:147.576:326.675,113.385:0.0,0.0:0.0,5.49581e-05,0.999948
-chr1	9725879	.	AATAAATAAATA	AATAAATAAATAAATA	.	.	END=9725890;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:16:0.541156:4,4:3-4,3-4:4,12,0,0:4,4:NULL:121.68:366.612,131.36:0.326282,0.326282:8.05336e-16,0.185431,0.814632	0/0:23:0.999126:3,3:3-3,3-3:13,8,0,2:3,13:2,2:138.552:326.675,113.385:0.0,0.0:2.34e-43,0.000423082,0.999582
-chr1	9726064	.	ACAACAACAACA	.	.	.	END=9726075;RU=aca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.999299:4,4:4-4,4-4:14,4,0,0:4,14:NULL:90.4591:366.612,131.36:0.0,0.0:0.0,0.00034447,0.999659	0/0:27:0.999997:4,4:4-4,4-4:18,6,0,3:4,18:3,3:146.303:326.675,113.385:0.0,0.0:0.0,1.10421e-05,0.999993
-chr1	9726319	.	GAAAGAAAGAAA	.	.	.	END=9726330;RU=gaaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999389:3,3:3-3,3-3:14,15,0,0:3,14:NULL:187.761:366.612,131.36:0.0,0.0:0.0,0.000348747,0.999652	0/0:31:0.999991:3,3:3-3,3-3:18,11,0,2:3,18:2,2:185.272:326.675,113.385:0.0,0.0:0.0,1.32864e-05,0.999987
-chr1	9726354	.	TATTTATTTATT	.	.	.	END=9726365;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999407:3,3:3-3,3-3:14,13,0,0:3,14:NULL:170.997:366.612,131.36:0.0,0.0:8.671e-42,0.000330732,0.999673	0/0:35:1.00001:3,3:3-3,3-3:21,12,0,2:3,21:2,2:204.567:326.675,113.385:0.0,0.0:0.0,1.8859e-06,1.0
-chr1	9727029	.	AAAACAAAACAAAACAAAAC	AAAAC	.	.	END=9727048;RU=aaaac;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.147142:1,1:1-3,1-3:0,29,0,0:NULL:NULL:260.807:366.612,131.36:0.611622,0.611622:0.774622,0.214201,0.0112283	0/0:45:1.0:4,4:4-4,4-4:23,17,0,5:4,23:2,1|3,4:276.386:326.675,113.385:0.0,0.0:0.0,2.68601e-07,1.0
-chr1	9728119	.	TTGTTGTTGTTG	.	.	.	END=9728130;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.999633:4,4:4-4,4-4:15,17,0,0:4,15:NULL:213.604:366.612,131.36:0.0,0.0:0.0,0.000271032,0.999729	0/0:23:0.999951:4,4:4-4,4-4:18,5,0,0:4,18:NULL:116.76:326.675,113.385:0.0,0.0:0.0,3.20147e-05,0.999971
-chr1	9728313	.	ATATATATATATATATAT	ATATATATATATATATATATATATATATATATATATATATATATATATAT	.	.	END=9728330;RU=at;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:14:0.821532:25,25:25-25,25-25:6,8,0,0:25,6:NULL:104.497:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:19:0.673641:9,9:9-10,9-10:5,13,0,0:9,5:NULL:142.839:326.675,113.385:0.603392,0.603392:1.10353e-05,0.188155,0.8119
-chr1	9729577	.	TTGTTGTTGTTG	.	.	.	END=9729588;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:1.0:4,4:4-4,4-4:24,0,0,0:4,24:NULL:93.8005:366.612,131.36:0.0,0.0:0.0,3.61953e-07,1.0	0/0:46:1.0:4,4:4-4,4-4:28,15,0,3:4,28:3,3:269.199:326.675,113.385:0.0,0.0:0.0,1.38348e-08,1.0
-chr1	9729594	.	ATTTATTTATTTATTT	.	.	.	END=9729609;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:29,0,0,0:4,29:NULL:114.501:366.612,131.36:0.0,0.0:0.0,1.14181e-08,1.0	0/0:46:1.0:4,4:3-4,3-4:27,15,0,3:4,27:3,3:267.498:326.675,113.385:0.169767,0.169767:0.0,3.26584e-08,1.0
-chr1	9730050	.	TGTGTGTGTGTGTGTG	.	.	.	END=9730065;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:73:1.0:8,8:8-8,8-8:45,20,0,6:8,45:5,2|6,2|7,1|8,1:410.914:366.612,131.36:0.0,0.0:0.0,1.52131e-13,1.0	0/0:69:1.0:8,8:8-8,8-8:45,15,0,5:8,45:5,1|6,1|7,3:360.851:326.675,113.385:0.835916,0.835916:0.0,1.68201e-13,1.0
-chr1	9730553	.	AGGAGGAGGAGG	.	.	.	END=9730564;RU=agg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999248:4,4:4-4,4-4:15,23,0,0:4,15:NULL:283.987:366.612,131.36:0.0,0.0:0.0,0.000659289,0.999346	0/0:38:1.0:4,4:4-4,4-4:20,18,0,0:4,20:NULL:241.989:326.675,113.385:0.0,0.0:0.0,9.69816e-06,0.999993
-chr1	9730578	.	GAGGGAGGGAGG	.	.	.	END=9730589;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:3,3:3-3,3-3:23,18,0,3:3,23:2,3:288.801:366.612,131.36:0.0,0.0:0.0,1.09775e-06,1.0	0/0:41:1.0:3,3:3-3,3-3:26,15,0,0:3,26:NULL:240.53:326.675,113.385:0.0,0.0:0.0,1.10364e-07,1.0
-chr1	9731162	.	AAAATAAAATAAAAT	.	.	.	END=9731176;RU=aaaat;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:3,3:3-3,3-3:24,23,0,3:3,24:2,3:324.123:366.612,131.36:0.0,0.0:0.0,4.06907e-07,1.0	0/0:38:1.0:3,3:3-3,3-3:28,10,0,0:3,28:NULL:205.696:326.675,113.385:0.0,0.0:0.0,1.97209e-08,1.0
-chr1	9732554	.	AATAATAATAAT	.	.	.	END=9732565;RU=aat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999678:4,4:4-4,4-4:15,7,0,0:4,15:NULL:122.542:366.612,131.36:0.0,0.0:0.0,0.000186926,0.999818	0/0:36:1.0:4,4:4-4,4-4:24,10,0,2:4,24:3,2:202.029:326.675,113.385:0.0,0.0:0.0,2.81655e-07,1.0
-chr1	9733417	.	ACACACACACACACAC	.	.	.	END=9733432;RU=ac;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.994154:8,8:7-9,7-9:18,13,0,0:7,2|8,16:NULL:194.667:366.612,131.36:0.385503,0.385503:4.85808e-28,0.00585527,0.994159	0/0:39:1.0:8,8:8-8,8-8:19,13,0,6:8,19:4,1|5,2|7,3:237.836:326.675,113.385:0.0990099,0.0990099:2.27551e-36,5.86533e-06,0.999995
-chr1	9736402	.	GGGTGGGTGGGT	.	.	.	END=9736413;RU=gggt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:0.999623:3,3:3-3,3-3:15,29,0,0:3,15:NULL:326.54:366.612,131.36:0.0,0.0:4.575e-42,0.000206288,0.999796	0/0:44:0.997205:3,3:3-3,3-3:13,31,0,0:3,13:NULL:332.866:326.675,113.385:0.0,0.0:1.49104e-35,0.00244273,0.997564
-chr1	9736710	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGT	.	.	END=9736727;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:63:1.0:7,7:7-7,7-7:33,27,0,2:7,31|8,2:5,1|6,1:407.127:366.612,131.36:0.0,0.0:1.0,1.6412e-09,0.0	0/0:61:1.0:9,9:9-9,9-9:36,17,0,8:8,2|9,32|10,2:5,6|6,1|9,1:382.691:326.675,113.385:0.0,0.0:0.0,1.24426e-07,1.0
-chr1	9740263	.	TTTGTTTGTTTGTTTG	.	.	.	END=9740278;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999301:4,4:4-4,4-4:13,18,0,3:4,13:3,3:232.383:366.612,131.36:0.0,0.0:1.078e-42,0.000389996,0.999613	0/0:41:1.0:4,4:4-4,4-4:27,10,0,4:4,27:3,4:231.344:326.675,113.385:0.0,0.0:0.0,2.00338e-08,1.0
-chr1	9740932	.	AATAAATAAATA	.	.	.	END=9740943;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.990468:3,3:1-3,1-3:10,11,0,0:3,10:NULL:135.689:366.612,131.36:0.998774,0.998774:3.04931e-29,0.00513869,0.994874	0/0:24:0.999148:3,3:3-3,3-3:13,9,0,2:3,13:2,2:143.419:326.675,113.385:0.0,0.0:8.42605e-38,0.000372926,0.999629
-chr1	9741427	.	ATATATATATATAT	.	.	.	END=9741440;RU=at;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.834358:7,7:6-7,6-7:15,10,0,0:6,2|7,13:NULL:155.991:366.612,131.36:0.419363,0.419363:2.42473e-16,0.16554,0.83453	0/0:23:0.98283:7,7:6-7,6-7:9,11,0,2:7,9:6,2:152.903:326.675,113.385:0.40582,0.40582:9.70936e-14,0.00935361,0.990665
-chr1	9742971	.	ACACACACACACACACACACACACACAC	.	.	.	END=9742998;RU=ac;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:7:0.260718:14,14:14-18,14-18:3,2,0,0:14,3:NULL:31.2034:366.612,131.36:1.68637,1.68637:4.67353e-05,0.219261,0.780736	0/0:16:0.673437:14,14:6-14,6-14:10,0,0,5:13,3|14,7:6,1|8,1|11,1|12,1|14,1:88.1707:326.675,113.385:3.81398,3.81398:2.73843e-15,0.316227,0.683785
-chr1	9743019	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9743048;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:7:0.268864:19,19:19-20,19-20:2,1,0,4:19,2:13,1|14,1|17,1|18,1:50.6647:366.612,131.36:0.317759,0.317759:0.0,0.0,1.0	1/0:6:0.714264:14,15:14-15,14-15:4,0,0,2:14,2|15,2:5,1|11,1:35.4905:326.675,113.385:0.492866,0.323567:0.0133686,0.802258,0.184464
-chr1	9743703	.	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTT	.	.	END=9743732;RU=tcttt;PERIOD=5;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.98728:8,8:6-8,6-8:11,8,0,0:8,11:NULL:122.033:366.612,131.36:0.874432,0.874432:1.207e-42,0.00771628,0.992303	0/0:31:0.999756:6,6:6-6,6-6:15,12,0,4:6,15:3,1|4,1|5,2:199.947:326.675,113.385:0.0,0.0:0.0,0.00014613,0.999857
-chr1	9743909	.	AAAACAAAACAAAAC	.	.	.	END=9743923;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999971:3,3:3-3,3-3:18,20,0,0:3,18:NULL:255.789:366.612,131.36:0.0,0.0:0.0,4.0055e-05,0.999963	0/0:45:1.0:3,3:3-3,3-3:31,14,0,0:3,31:NULL:250.64:326.675,113.385:0.0,0.0:0.0,5.20746e-09,1.0
-chr1	9748068	.	GCCGCCGCCGCC	.	.	.	END=9748079;RU=gcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:4,4:4-4,4-4:26,17,0,0:4,26:NULL:257.092:366.612,131.36:0.0,0.0:0.0,1.47759e-07,1.0	0/0:41:1.0:4,4:4-4,4-4:22,19,0,0:4,22:NULL:267.859:326.675,113.385:0.0,0.0:0.0,4.34809e-06,0.999995
-chr1	9748275	.	TCCTCCTCCTCC	.	.	.	END=9748286;RU=tcc;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:27,18,0,0:4,27:NULL:270.516:366.612,131.36:0.0,0.0:0.0,8.17244e-08,1.0	0/0:49:1.0:4,4:4-4,4-4:31,18,0,0:4,31:NULL:288.438:326.675,113.385:0.0,0.0:0.0,4.31425e-09,1.0
-chr1	9748387	.	CACTCACTCACT	.	.	.	END=9748398;RU=cact;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999851:3,3:3-3,3-3:16,21,0,2:3,16:2,2:268.385:366.612,131.36:0.0,0.0:0.0,0.000101391,0.999902	0/0:36:1.0:3,3:3-3,3-3:26,10,0,0:3,26:NULL:197.561:326.675,113.385:0.0,0.0:0.0,7.43655e-08,1.0
-chr1	9749147	.	TTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTG	.	.	END=9749162;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:23:0.284783:4,5:4-4,4-8:15,6,0,2:4,15:2,1|5,1:139.489:366.612,131.36:0.0,0.954612:0.0,4.00039e-08,1.0	0/0:32:1.0:4,4:4-4,4-4:21,11,0,0:4,21:NULL:188.623:326.675,113.385:0.0,0.0:0.0,4.79595e-06,0.999995
-chr1	9749755	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTG	.	.	END=9749786;RU=tg;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:20:0.99473:11,11:11-11,11-11:12,8,0,0:11,12:NULL:125.418:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:26:0.507991:16,16:15-17,15-17:9,6,0,10:15,2|16,7:6,1|10,2|14,2|15,5:180.248:326.675,113.385:0.606956,0.606956:3.50875e-07,0.483237,0.516843
-chr1	9750225	.	AGTAGTAGTAGT	.	.	.	END=9750236;RU=agt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:45:1.0:4,4:4-4,4-4:21,24,0,0:4,21:NULL:298.024:366.612,131.36:0.0,0.0:0.0,5.6266e-06,0.999995	0/0:29:1.00001:4,4:4-4,4-4:22,7,0,0:4,22:NULL:149.83:326.675,113.385:0.0,0.0:0.0,2.38812e-06,1.0
-chr1	9752253	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9752286;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:0.997256:17,17:17-17,17-17:17,17,0,16:16,2|17,15:5,1|6,1|7,1|9,1|10,1|12,2|13,2|14,1|15,3|16,3:365.646:366.612,131.36:0.139319,0.139319:8.89801e-17,0.00262498,0.997382	0/1:53:0.277617:17,28:17-17,17-29:20,13,0,20:16,2|17,15|18,3:4,1|5,1|6,4|9,1|10,3|11,3|12,1|16,2|17,1|22,1|25,1|27,1:398.995:326.675,113.385:0.0,3.61678:9.044e-42,3.50049e-19,1.0
-chr1	9754367	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9754416;RU=tg;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:57:0.990223:27,27:27-27,27-27:13,19,0,23:27,13:4,2|5,1|6,1|8,1|11,1|12,1|13,1|16,2|17,3|18,2|19,1|20,2|21,2|23,2|25,1:420.448:366.612,131.36:0.0,0.0:3.55007e-33,0.00110758,0.998898	0/0:44:0.998768:25,25:20-25,20-25:18,8,0,15:24,2|25,16:6,1|7,1|10,1|12,1|13,1|14,1|15,2|20,2|21,2|22,1|24,2:282.635:326.675,113.385:1.19347,1.19347:5.59785e-17,0.000549827,0.999453
-chr1	9755337	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9755366;RU=gt;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:25:0.0259109:21,38:18-38,18-40:0,11,0,14:NULL:5,1|8,1|9,1|10,1|11,1|13,1|14,1|15,2|18,3|20,1|38,1:208.402:366.612,131.36:6.23399,8.69789:0.0,0.00387329,0.996135	0/1:40:0.28343:15,18:15-15,14-21:15,14,0,10:14,3|15,12:7,2|8,2|11,1|13,1|14,2|15,1|18,1:292.839:326.675,113.385:0.0,2.01937:2.47547e-24,2.57404e-05,0.999978
-chr1	9755657	.	TTGTTTGTTTGT	.	.	.	END=9755668;RU=ttgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.0:3,3:3-3,3-3:24,10,0,0:3,24:NULL:186.489:366.612,131.36:0.0,0.0:0.0,3.11925e-07,1.0	0/0:42:1.0:3,3:3-3,3-3:28,14,0,0:3,28:NULL:242.226:326.675,113.385:0.0,0.0:0.0,1.51129e-08,1.0
-chr1	9756639	.	TACATACATACA	.	.	.	END=9756650;RU=taca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.966555:3,3:3-3,3-3:8,6,0,0:3,8:NULL:87.5348:366.612,131.36:0.0,0.0:9.22639e-24,0.0144593,0.985571	0/0:25:0.999983:3,3:3-3,3-3:18,7,0,0:3,18:NULL:130.067:326.675,113.385:0.0,0.0:0.0,1.92148e-05,0.99998
-chr1	9757162	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9757199;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:0.627552:20,20:20-20,20-20:4,16,0,13:20,4:7,1|10,1|11,3|12,2|14,1|16,1|17,2|18,1|20,1:268.773:366.612,131.36:0.0,0.0:1.04652e-15,0.0540829,0.946001	0/0:39:0.810248:19,19:17-19,17-19:18,9,0,10:17,2|18,4|19,12:6,1|8,1|10,2|11,1|12,1|15,1|16,3:255.456:326.675,113.385:0.725682,0.725682:5.86452e-12,0.18951,0.81055
-chr1	9758381	.	GAGGGAGGGAGG	.	.	.	END=9758392;RU=gagg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999043:3,3:3-3,3-3:13,17,0,3:3,13:2,3:233.894:366.612,131.36:0.0,0.0:9.2e-44,0.000391643,0.999613	0/0:20:0.999413:3,3:3-3,3-3:14,6,0,0:3,14:NULL:109.155:326.675,113.385:0.0,0.0:0.0,0.000297211,0.999705
-chr1	9760350	.	TCTGTCTGTCTG	.	.	.	END=9760361;RU=tctg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999711:3,3:3-3,3-3:15,11,0,0:3,15:NULL:162.063:366.612,131.36:0.0,0.0:0.0,0.000177622,0.999826	0/0:21:0.992456:3,3:3-3,3-3:10,11,0,0:3,10:NULL:145.772:326.675,113.385:0.0,0.0:8.02761e-33,0.00492337,0.995091
-chr1	9762148	.	GCTTGCTTGCTTGCTT	.	.	.	END=9762163;RU=gctt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997277:4,4:3-4,3-4:13,11,0,0:4,13:NULL:157.657:366.612,131.36:0.484441,0.484441:7.004e-42,0.00191796,0.998087	0/0:15:0.997053:4,4:4-4,4-4:12,3,0,0:4,12:NULL:72.1752:326.675,113.385:0.0,0.0:3.34431e-39,0.0016027,0.998405
-chr1	9762349	.	ATTTATTTATTT	ATTT	.	.	END=9762360;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:23:0.444967:1,3:1-4,3-4:2,20,0,0:3,2:NULL:212.951:366.612,131.36:1.24587,0.479355:2.66417e-05,0.665763,0.334226	0/0:14:0.86346:3,3:3-3,3-3:6,8,0,0:3,6:NULL:97.6072:326.675,113.385:0.0,0.0:2.96324e-15,0.0753266,0.92477
-chr1	9763714	.	AATAAATAAATAAATA	.	.	.	END=9763729;RU=aata;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999239:4,4:4-4,4-4:14,20,0,2:4,14:3,2:252.735:366.612,131.36:0.0,0.0:1.4954e-40,0.000504567,0.999499	0/0:29:0.999768:4,4:4-4,4-4:16,13,0,0:4,16:NULL:181.07:326.675,113.385:0.0,0.0:0.0,0.000168551,0.999834
-chr1	9763878	.	AAAAACAAAAACAAAAAC	.	.	.	END=9763895;RU=aaaaac;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.964413:3,3:3-3,3-3:8,15,0,2:3,8:2,2:184.52:366.612,131.36:0.0,0.0:7.99829e-27,0.0215309,0.978512	0/0:28:1.0:3,3:3-3,3-3:20,8,0,0:3,20:NULL:157.123:326.675,113.385:0.0,0.0:0.0,7.80059e-06,0.999994
-chr1	9765363	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9765406;RU=gt;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/2:22:0.999992:22,26:22-22,22-26:13,7,0,2:22,8|26,5:7,1|18,1:148.74:366.612,131.36:0.0,0.780108:8.05933e-23,2.55888e-10,1.0	1/0:27:0.72604:21,22:21-22,22-22:7,9,0,11:21,2|22,5:6,1|9,1|10,1|11,2|12,2|13,1|17,1|18,1|20,1:202.097:326.675,113.385:0.499387,0.0990099:2.71366e-05,0.744188,0.255792
-chr1	9765415	.	GCGCGCGCGCGCGC	.	.	.	END=9765428;RU=gc;PERIOD=2;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999862:7,7:6-7,6-7:17,8,0,0:7,17:NULL:142.377:366.612,131.36:0.169767,0.169767:8.93e-43,8.60959e-05,0.999917	0/0:23:0.997911:7,7:7-7,7-7:13,10,0,0:7,13:NULL:140.463:326.675,113.385:0.0,0.0:7.27135e-33,0.000986207,0.99902
-chr1	9770170	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9770189;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999402:10,10:10-11,10-11:14,16,0,5:10,14:6,1|7,1|8,2|9,1:246.55:366.612,131.36:0.322657,0.322657:7.76315e-25,0.000246239,0.999757	0/1:32:0.291365:10,14:10-10,10-14:16,13,0,2:10,16:7,1|13,1:216.461:326.675,113.385:0.0,1.55007:3.90969e-31,1.72145e-07,1.0
-chr1	9770190	.	GCGCGCGCGCGCGCGCGCGC	.	.	.	END=9770209;RU=gc;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997553:10,10:10-10,10-10:12,13,0,0:10,12:NULL:169.02:366.612,131.36:0.0,0.0:3.79124e-31,0.00132692,0.998678	0/0:26:0.997978:10,10:10-10,10-10:13,13,0,0:10,13:NULL:176.391:326.675,113.385:0.0,0.0:1.62128e-33,0.00144893,0.998557
-chr1	9770676	.	GCCCAGCCCAGCCCA	.	.	.	END=9770690;RU=gccca;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999697:3,3:3-3,3-3:15,18,0,0:3,15:NULL:217.894:366.612,131.36:0.0,0.0:0.0,0.000236184,0.999766	0/0:33:1.0:3,3:3-3,3-3:25,8,0,0:3,25:NULL:174.723:326.675,113.385:0.0,0.0:0.0,2.41586e-07,1.0
-chr1	9771804	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9771841;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:60:0.999998:13,13:13-13,13-13:29,19,0,10:12,3|13,26:5,2|6,2|7,2|8,1|12,3:381.097:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:58:0.979498:19,19:18-19,18-19:24,18,0,16:17,2|18,4|19,18:5,1|6,4|9,1|10,1|11,1|12,2|13,2|16,1|17,2|18,1:414.085:326.675,113.385:0.253975,0.253975:4.98745e-19,0.0205358,0.979505
-chr1	9771917	.	CCACCACCACCACCACCACCA	.	.	.	END=9771937;RU=cca;PERIOD=3;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:44:1.0:7,7:7-7,7-7:26,15,0,3:7,26:5,2|6,1:261.157:366.612,131.36:0.0,0.0:0.0,7.95077e-08,1.0	0/0:45:1.0:7,7:7-7,7-7:24,16,0,5:7,24:3,1|5,1|6,3:286.844:326.675,113.385:0.0,0.0:0.0,2.22096e-07,1.0
-chr1	9772803	.	TATTTATTTATT	.	.	.	END=9772814;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.9895:3,3:3-3,3-3:10,10,0,0:3,10:NULL:126.035:366.612,131.36:0.0,0.0:6.07052e-30,0.00541532,0.994596	0/0:20:0.999978:3,3:3-3,3-3:18,2,0,0:3,18:NULL:88.7298:326.675,113.385:0.0,0.0:0.0,1.57048e-05,0.999986
-chr1	9773234	.	CACTCACTCACTCACTCACTCACT	.	.	.	END=9773257;RU=cact;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:6,6:6-6,6-6:21,14,0,3:6,21:2,1|3,2:237.891:366.612,131.36:0.0,0.0:0.0,7.5556e-06,0.999994	0/0:38:0.999985:6,6:6-6,6-6:18,14,0,6:6,18:3,3|4,3:238.929:326.675,113.385:0.0,0.0:0.0,2.30818e-05,0.999979
-chr1	9773465	.	AGGGAGGGAGGG	.	.	.	END=9773476;RU=aggg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.990242:3,3:3-3,3-3:10,20,0,2:3,10:2,2:240.93:366.612,131.36:0.0,0.0:1.05612e-25,0.00535308,0.994662	0/0:27:0.995156:3,3:3-3,3-3:11,16,0,0:3,11:NULL:188.95:326.675,113.385:0.0,0.0:5.69066e-29,0.00309688,0.996912
-chr1	9775295	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9775348;RU=tg;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/3:50:0.359204:16,31:16-16,16-32:14,18,0,17:16,14:6,2|8,2|9,2|10,2|12,1|13,3|14,3|16,1|31,1:378.404:366.612,131.36:0.0,7.41562:0.000827229,0.999174,0.0	0/2:63:0.420572:27,29:26-27,25-29:10,19,0,32:26,2|27,8:5,2|6,2|7,2|8,1|9,1|10,1|11,1|12,2|13,2|14,1|15,3|16,1|18,1|19,3|21,1|23,1|24,1|26,3|27,1|28,1|29,1:481.528:326.675,113.385:0.363786,0.950392:1.92112e-27,2.60118e-07,1.0
-chr1	9776621	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9776664;RU=tg;PERIOD=2;REF=22.0;EXPTHRESH=22	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:33:0.728612:19,20:18-20,19-20:7,14,0,11:19,3|20,4:6,1|11,1|13,3|15,2|16,1|18,1|19,2:245.307:366.612,131.36:0.482006,0.258566:0.987298,0.0127278,6.95088e-09	3/0:35:0.690203:21,22:21-22,22-22:8,11,0,16:21,4|22,4:6,2|7,1|8,2|11,1|12,2|17,1|18,2|19,1|20,1|21,2|22,1:266.453:326.675,113.385:0.499779,0.0990099:6.32586e-11,0.695356,0.304656
-chr1	9778986	.	GTTTTGTTTTGTTTTGTTTT	GTTTT	.	.	END=9779005;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:28:0.989419:4,4:4-4,4-4:9,15,0,4:4,9:3,4:197.918:326.675,113.385:0.0,0.0:1.9785e-29,0.00514016,0.994873
-chr1	9781279	.	ACACACACACAC	ACACACAC	.	.	END=9781290;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:34:1.0:4,6:4-4,6-6:23,9,0,2:4,18|6,5:5,2:205.748:366.612,131.36:0.0,0.220506:8.01649e-15,1.0,3.01e-43	0/0:36:1.0:6,6:4-6,4-6:25,8,0,2:6,25:5,2:188.694:326.675,113.385:0.472766,0.472766:0.0,1.46617e-07,1.0
-chr1	9781294	.	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9781321;RU=tttg;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:34:1.00001:6,6:6-6,6-6:21,10,0,3:6,21:3,1|5,2:198.83:366.612,131.36:0.0,0.0:1.0,3.46571e-06,1.64653e-38	0/0:37:1.0:7,7:7-7,7-7:24,8,0,4:7,24:3,2|6,2:202.003:326.675,113.385:0.0990099,0.0990099:0.0,3.46566e-07,1.0
-chr1	9782765	.	ACACACACACAC	.	.	.	END=9782776;RU=ac;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:6,6:6-6,6-6:25,14,0,2:6,25:5,2:240.552:366.612,131.36:0.0,0.0:0.0,1.41851e-07,1.0	0/0:31:0.999979:6,6:6-6,6-6:18,11,0,2:6,18:4,1|5,1:185.59:326.675,113.385:0.0,0.0:5.9746e-41,1.31117e-05,0.999987
-chr1	9783489	.	TTAATTAATTAA	.	.	.	END=9783500;RU=ttaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:19:0.931726:3,3:3-3,3-3:7,12,0,0:3,7:NULL:143.564:366.612,131.36:0.0,0.0:1.00431e-22,0.0421595,0.957909	0/0:20:0.977339:3,3:3-3,3-3:9,11,0,0:3,9:NULL:133.384:326.675,113.385:0.0,0.0:7.88699e-29,0.0123908,0.987638
-chr1	9783579	.	TTTTTCTTTTTCTTTTTC	.	.	.	END=9783596;RU=tttttc;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.00001:3,3:3-3,3-3:21,11,0,0:3,21:NULL:191.105:366.612,131.36:0.0,0.0:0.0,3.26877e-06,1.0	0/0:33:1.0:3,3:3-3,3-3:24,7,0,2:3,24:2,2:172.379:326.675,113.385:0.0,0.0:0.0,2.68502e-07,1.0
-chr1	9784280	.	CACACACACACA	.	.	.	END=9784291;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:63:1.0:6,6:6-6,6-6:48,3,0,10:6,48:5,10:295.928:366.612,131.36:0.0,0.0:0.0,1.23147e-14,1.0	0/0:62:1.0:6,6:6-6,6-6:37,17,0,8:6,37:4,1|5,7:375.86:326.675,113.385:0.0,0.0:0.0,2.25615e-11,1.0
-chr1	9784615	.	GAGGCAGAGGCAGAGGCA	GAGGCAGAGGCA	.	.	END=9784632;RU=gaggca;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:3:0.248705:2,2:2-4,2-4:2,0,0,0:2,2:NULL:7.85465:366.612,131.36:0.930482,0.930482:0.373682,0.62612,0.000254202	0/0:61:0.621118:3,3:2-6,2-6:24,34,0,2:2,3|3,21:2,1|5,1:451.761:326.675,113.385:1.18638,1.18638:0.0,0.0207558,0.979286
-chr1	9784654	.	AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	AGAGGCAGAGAGGCAGAGAGGCAG,AGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCAG	.	.	END=9784685;RU=agaggcag;PERIOD=8;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:9:0.985133:3,5:3-7,4-7:8,0,0,0:3,3|4,2|5,3:NULL:45.1349:366.612,131.36:1.04922,0.802164:4.22929e-07,0.992433,0.00758428	0/0:52:0.999119:4,4:4-7,4-7:27,21,0,2:4,24|5,3:3,2:334.649:326.675,113.385:0.839777,0.839777:2.4e-44,9.83233e-08,1.0
-chr1	9784706	.	AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	AGAGGC,AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGC	.	.	END=9784741;RU=agaggc;PERIOD=6;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:1:0.0278135:1,1:3-3,3-3:0,0,0,0:NULL:NULL:-25.0:366.612,131.36:0.0,0.0:0.694258,0.277978,0.0277995	0/2:40:0.395279:6,8:6-6,6-9:21,13,0,6:6,21:3,2|4,3|8,1:264.25:326.675,113.385:0.0,1.03293:0.0,1.19432e-07,1.0
-chr1	9786376	.	GTTTGGTTTGGTTTG	.	.	.	END=9786390;RU=gtttg;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999852:3,3:3-3,3-3:16,8,0,0:3,16:NULL:133.565:366.612,131.36:0.0,0.0:0.0,8.14397e-05,0.999919	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:189.598:326.675,113.385:0.0,0.0:0.0,5.16134e-06,0.999995
-chr1	9788816	.	AACAACAACAAC	AACAACAACAACAAC	.	.	END=9788827;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.938741:5,5:5-5,5-5:8,9,0,0:5,8:NULL:109.917:366.612,131.36:0.0,0.0:4.20051e-38,0.0268514,0.973202	0/0:21:0.99973:4,4:4-4,4-4:15,4,0,2:4,15:3,2:112.361:326.675,113.385:0.0,0.0:0.0,0.000101813,0.999902
-chr1	9789386	.	ATTTTATTTTATTTT	.	.	.	END=9789400;RU=atttt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,11,0,2:3,22:2,2:208.141:366.612,131.36:0.0,0.0:0.0,8.52529e-07,1.0	0/0:26:0.999417:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.853:326.675,113.385:0.0,0.0:0.0,0.000427715,0.999575
-chr1	9796569	.	ACACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACAC	.	.	END=9796608;RU=ac;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.955718:13,13:12-14,12-14:12,19,0,4:12,2|13,10:5,1|7,1|9,1|12,1:263.311:366.612,131.36:0.397522,0.397522:1.0,0.0,0.0	0/0:39:0.851358:20,20:19-20,19-20:17,12,0,9:19,5|20,12:8,3|10,1|12,1|14,1|16,1|17,2:268.039:326.675,113.385:0.478127,0.478127:1.68661e-13,0.148339,0.85174
-chr1	9798093	.	CCGCCCGCCCGCCCGCCCGC	.	.	.	END=9798112;RU=ccgc;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999086:5,5:5-5,5-5:13,17,0,5:5,13:2,1|3,1|4,3:247.0:366.612,131.36:0.0,0.0:3.414e-42,0.000565405,0.999438	0/0:44:1.0:5,5:5-5,5-5:23,17,0,4:5,23:3,1|4,3:281.783:326.675,113.385:0.0,0.0:0.0,3.9344e-07,1.0
-chr1	9800381	.	TTTTATTTTATTTTA	.	.	.	END=9800395;RU=tttta;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:18:0.988017:3,3:3-3,3-3:10,8,0,0:3,10:NULL:117.52:366.612,131.36:0.0,0.0:6.69032e-33,0.00776259,0.992257	0/0:28:0.999938:3,3:3-3,3-3:17,8,0,3:3,17:2,3:164.191:326.675,113.385:0.0,0.0:0.0,2.82943e-05,0.999972
-chr1	9801889	.	TTCTTTCTTTCT	.	.	.	END=9801900;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999516:3,3:3-3,3-3:15,11,0,0:3,15:NULL:163.087:366.612,131.36:0.0,0.0:6.9e-44,0.000268222,0.999735	0/0:10:0.964687:3,3:3-3,3-3:8,2,0,0:3,8:NULL:48.5915:326.675,113.385:0.0,0.0:5.61729e-24,0.0150769,0.984957
-chr1	9803579	.	CACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACA	.	.	END=9803606;RU=ca;PERIOD=2;REF=14.0;EXPTHRESH=14	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:32:0.88391:15,15:15-16,15-16:6,18,0,7:15,6:6,1|7,1|8,1|11,1|13,2|14,1:243.146:366.612,131.36:0.398507,0.398507:1.37015e-19,0.0164038,0.98363	0/1:27:0.815792:14,15:14-14,14-15:17,6,0,4:14,13|15,4:8,2|10,1|12,1:173.844:326.675,113.385:0.0,0.498798:1.52138e-19,2.32917e-05,0.999979
-chr1	9804974	.	TTGTTTGTTTGTTTGT	.	.	.	END=9804989;RU=ttgt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:22:0.999777:4,4:4-4,4-4:16,6,0,0:4,16:NULL:118.431:366.612,131.36:0.0,0.0:0.0,0.000128633,0.999872	0/0:17:0.998613:4,4:4-4,4-4:13,4,0,0:4,13:NULL:89.6982:326.675,113.385:0.0,0.0:3.39e-43,0.000790602,0.999211
-chr1	9806598	.	TTGTTGTTGTTGTTGTTG	.	.	.	END=9806615;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:12:0.853582:6,6:6-6,6-6:6,6,0,0:6,6:NULL:77.6782:366.612,131.36:0.0,0.0:4.9514e-15,0.0782325,0.921864	0/0:17:0.994489:6,6:6-6,6-6:11,6,0,0:6,11:NULL:99.6822:326.675,113.385:0.0,0.0:1.39924e-26,0.00350447,0.996504
-chr1	9806750	.	TTGTTGTTGTTG	.	.	.	END=9806761;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.999921:4,4:4-4,4-4:17,11,0,0:4,17:NULL:161.608:366.612,131.36:0.0,0.0:0.0,4.79419e-05,0.999955	0/0:24:0.996284:4,4:4-4,4-4:12,12,0,0:4,12:NULL:157.937:326.675,113.385:0.0,0.0:4.87992e-40,0.00240843,0.997601
-chr1	9806981	.	CGGGCGGGCGGGCGGG	.	.	.	END=9806996;RU=cggg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.989594:4,4:3-4,3-4:10,29,0,0:4,10:NULL:297.311:366.612,131.36:0.489073,0.489073:1.19331e-31,0.00907198,0.990948	0/0:22:0.986559:4,4:4-4,4-4:10,12,0,0:4,10:NULL:147.084:326.675,113.385:0.0,0.0:1.26129e-31,0.00847134,0.991547
-chr1	9807678	.	TTTTGTTTTGTTTTGTTTTG	.	.	.	END=9807697;RU=ttttg;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999646:4,4:4-4,4-4:14,14,0,3:4,14:2,1|3,2:201.224:366.612,131.36:0.0,0.0:0.0,0.000195752,0.999805	0/0:27:1.00001:4,4:4-4,4-4:22,5,0,0:4,22:NULL:132.185:326.675,113.385:0.0,0.0:0.0,2.19567e-06,1.0
-chr1	9808179	.	TGTGTGTGTGTGTGTG	.	.	.	END=9808194;RU=tg;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.999386:8,8:8-8,8-8:16,14,0,0:8,16:NULL:200.534:366.612,131.36:0.0,0.0:1.96352e-29,0.000336866,0.999666	0/0:32:0.999918:8,8:8-8,8-8:18,9,0,4:8,18:4,1|5,2|6,1:188.85:326.675,113.385:0.0990099,0.0990099:6.67356e-33,3.72853e-05,0.999964
-chr1	9808200	.	GAGAGAGAGAGA	.	.	.	END=9808211;RU=ga;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.999693:6,6:6-6,6-6:16,18,0,0:6,16:NULL:230.695:366.612,131.36:0.0,0.0:1.655e-42,0.00018272,0.999819	0/0:34:1.0:6,6:6-6,6-6:24,10,0,0:6,24:NULL:186.575:326.675,113.385:0.0,0.0:0.0,6.11492e-07,1.0
-chr1	9808370	.	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	TCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA	.	.	END=9808417;RU=tcca;PERIOD=4;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.998063:10,10:10-10,10-10:12,13,0,11:10,12:4,2|6,4|7,2|8,1|9,2:253.601:366.612,131.36:0.0,0.0:0.999514,0.000488608,2.76787e-32	0/0:29:0.999744:12,12:7-12,7-12:16,6,0,5:12,16:2,1|6,1|8,1|9,1|11,1:163.278:326.675,113.385:2.13292,2.13292:2.5e-44,0.000172019,0.999828
-chr1	9808990	.	GTTGGTTGGTTG	.	.	.	END=9809001;RU=gttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999405:3,3:3-3,3-3:14,13,0,0:3,14:NULL:177.168:366.612,131.36:0.0,0.0:0.0,0.000397118,0.999606	0/0:33:0.999972:3,3:3-3,3-3:17,12,0,4:3,17:2,4:202.829:326.675,113.385:0.0,0.0:0.0,1.99062e-05,0.99998
-chr1	9812671	.	ATTATATTATATTATATTATATTATATTATATTATATTAT	ATTATATTATATTATATTATATTATATTATATTATATTATATTATATTAT	.	.	END=9812710;RU=attat;PERIOD=5;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:24:0.929431:10,10:10-10,10-10:7,7,0,10:10,7:2,1|3,3|5,1|6,1|8,1|9,3:170.782:366.612,131.36:0.0,0.0:0.0,0.00194016,0.998064	0/0:16:0.97688:8,8:8-10,8-10:9,3,0,3:8,9:4,1|6,1|8,1:89.9138:326.675,113.385:0.985733,0.985733:7.60617e-29,0.00642369,0.993594
-chr1	9818042	.	CTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCT	.	.	END=9818065;RU=ct;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:30:0.998255:8,8:8-8,8-8:13,12,0,4:8,13:4,1|5,1|7,2:196.425:366.612,131.36:0.0990099,0.0990099:1.0,0.0,0.0	0/0:39:0.994984:12,12:11-12,11-12:18,14,0,6:11,2|12,16:5,2|6,1|7,1|8,1|11,1:258.777:326.675,113.385:0.19802,0.19802:1.30381e-19,0.0050082,0.995003
-chr1	9818295	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9818334;RU=gt;PERIOD=2;REF=20.0;EXPTHRESH=20	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:37:0.48605:22,22:20-23,20-23:7,18,0,10:21,2|22,5:9,1|13,1|15,1|16,1|18,1|19,3|20,2:275.557:366.612,131.36:0.839893,0.839893:1.30512e-28,0.0037958,0.996216	0/0:36:0.966917:20,20:19-20,19-20:15,8,0,12:19,3|20,12:5,3|6,1|8,2|9,2|14,3|15,1:238.437:326.675,113.385:0.311527,0.311527:1.02404e-11,0.0317838,0.968277
-chr1	9820226	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9820273;RU=tg;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:43:0.694588:23,23:22-23,22-23:11,19,0,13:22,4|23,7:5,1|7,1|10,1|13,4|16,1|17,1|19,2|22,2:332.197:366.612,131.36:0.398507,0.398507:0.986097,0.01393,2.23481e-06	0/0:36:0.993385:24,24:21-25,21-25:15,10,0,9:24,15:5,1|7,1|8,1|10,1|11,2|13,1|16,1|20,1:235.877:326.675,113.385:0.561483,0.561483:3.0861e-17,0.000580728,0.999423
-chr1	9821837	.	ATTTATTTATTT	.	.	.	END=9821848;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.998511:3,3:3-3,3-3:13,7,0,0:3,13:NULL:117.565:366.612,131.36:0.0,0.0:5.13e-38,0.000747728,0.999256	0/0:30:1.0:3,3:3-3,3-3:23,7,0,0:3,23:NULL:156.203:326.675,113.385:0.0,0.0:0.0,4.60405e-07,1.0
-chr1	9821849	.	TATGTATGTATG	.	.	.	END=9821860;RU=tatg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:20:0.994045:3,3:3-3,3-3:11,9,0,0:3,11:NULL:126.202:366.612,131.36:0.0,0.0:4.28964e-32,0.00311552,0.996891	0/0:30:1.0:3,3:3-3,3-3:19,8,0,3:3,19:2,3:172.917:326.675,113.385:0.0,0.0:0.0,6.31206e-06,0.999994
-chr1	9823285	.	TTCTTTCTTTCT	.	.	.	END=9823296;RU=ttct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.990103:3,3:3-3,3-3:10,15,0,0:3,10:NULL:173.987:366.612,131.36:0.0,0.0:4.47423e-25,0.0067479,0.99327	0/0:32:1.00001:3,3:3-3,3-3:23,6,0,3:3,23:2,3:167.214:326.675,113.385:0.0,0.0:0.0,4.1974e-07,1.0
-chr1	9824948	.	TGTCTGTCTGTC	.	.	.	END=9824959;RU=tgtc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:67:0.993508:3,3:3-6,3-6:40,25,0,2:3,34|5,2|6,4:2,2:434.181:366.612,131.36:1.34522,1.34522:0.0,8.55004e-11,1.0	0/0:41:1.00001:3,3:3-3,3-3:22,16,0,3:3,22:2,3:254.318:326.675,113.385:0.0,0.0:9.1404e-41,1.24183e-06,1.0
-chr1	9824960	.	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	TCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	.	.	END=9825019;RU=tcct;PERIOD=4;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:75:0.894101:18,18:17-18,17-18:6,36,0,32:18,6:3,1|4,2|5,2|6,4|7,3|8,4|9,4|10,1|11,3|12,2|13,2|14,1|15,1|16,2:590.562:366.612,131.36:0.601439,0.601439:5.7e-44,0.0205646,0.979476	0/0:50:0.886348:15,15:15-15,15-15:6,21,0,23:15,6:3,1|4,2|5,1|6,3|7,2|8,5|10,1|11,1|12,2|13,4|15,1:385.936:326.675,113.385:0.19802,0.19802:2.6076e-24,0.0454539,0.95462
-chr1	9825656	.	ACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACACAC	.	.	END=9825687;RU=ac;PERIOD=2;REF=16.0;EXPTHRESH=16	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:41:0.836127:18,19:18-18,18-19:16,16,0,7:17,2|18,14:5,1|6,1|10,1|12,1|16,1|17,1|19,1:286.494:366.612,131.36:0.0,0.552507:0.0,4.13143e-09,1.0	0/0:43:0.929022:16,16:14-16,14-16:14,15,0,13:15,3|16,11:6,2|7,1|8,1|9,5|12,2|13,1|14,1:311.934:326.675,113.385:0.467134,0.467134:2.76491e-11,0.0697273,0.930367
-chr1	9827879	.	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG	.	.	END=9827922;RU=atag;PERIOD=4;REF=11.0;EXPTHRESH=11	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:29:0.997821:12,12:12-14,12-14:13,9,0,6:12,13:2,1|3,1|4,1|5,1|6,1|11,1:185.044:366.612,131.36:0.938037,0.938037:1e-45,0.000621068,0.999384	0/0:34:0.990326:11,11:10-11,10-11:10,10,0,13:11,10:3,1|4,1|5,2|6,3|7,1|8,1|9,3|10,1:226.932:326.675,113.385:0.486863,0.486863:3.51965e-21,0.00474081,0.995273
-chr1	9829194	.	CAAACAAACAAA	.	.	.	END=9829205;RU=caaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.931957:3,3:3-3,3-3:8,20,0,0:3,8:NULL:215.818:366.612,131.36:0.19802,0.19802:2.28635e-26,0.0536245,0.946459	0/0:23:1.0:3,3:3-3,3-3:19,4,0,0:3,19:NULL:110.934:326.675,113.385:0.0,0.0:0.0,7.53979e-06,0.999994
-chr1	9830384	.	TGTTGTTGTTGTTGTTGTTGTTGT	TGTTGTTGTTGTTGTTGTTGT	.	.	END=9830407;RU=tgt;PERIOD=3;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:1.00001:7,7:7-7,7-7:20,5,0,6:7,20:4,2|5,2|6,2:170.636:366.612,131.36:0.0,0.0:0.999994,7.56169e-06,1.09839e-35	0/0:42:1.00001:8,8:8-9,8-9:21,13,0,7:8,21:4,1|5,2|6,1|7,3:258.526:326.675,113.385:0.236383,0.236383:0.0,2.35716e-06,1.0
-chr1	9830483	.	ATTTATTTATTTATTT	.	.	.	END=9830498;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999662:4,4:4-4,4-4:15,8,0,0:4,15:NULL:129.304:366.612,131.36:0.0,0.0:0.0,0.000198231,0.999804	0/0:40:1.0:4,4:4-4,4-4:25,9,0,6:4,25:2,2|3,4:227.354:326.675,113.385:0.0,0.0:0.0,9.26518e-08,1.0
-chr1	9831159	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACA	.	.	END=9831204;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:22:0.875261:18,18:17-18,17-18:10,7,0,5:17,2|18,8:5,1|7,1|8,1|11,2:153.974:366.612,131.36:0.298675,0.298675:1.0,0.0,0.0	0/0:41:0.979102:23,23:21-23,21-23:10,12,0,17:23,10:5,3|8,1|9,1|11,2|14,2|15,2|16,1|18,1|20,2|21,1|22,1:293.713:326.675,113.385:0.374933,0.374933:2.1171e-11,0.00763937,0.992378
-chr1	9837956	.	AGAAAAGAAAAGAAA	AGAAA	.	.	END=9837970;RU=agaaa;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:8:0.0297231:1,1:1-2,1-2:0,8,0,0:NULL:NULL:71.9503:366.612,131.36:0.390807,0.390807:0.0782578,0.444725,0.477189	0/0:30:1.00001:3,3:3-3,3-3:20,10,0,0:3,20:NULL:167.123:326.675,113.385:0.0,0.0:0.0,3.63503e-06,1.0
-chr1	9838257	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9838310;RU=ct;PERIOD=2;REF=27.0;EXPTHRESH=27	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:3:0.0468556:33,35:33-36,33-36:0,2,0,0:NULL:NULL:19.3453:366.612,131.36:0.950392,0.950392:0.0,0.0,1.0	0/3:39:0.304945:27,50:27-28,27-50:7,15,0,16:26,2|27,5:7,2|9,1|10,1|13,1|14,1|15,1|16,1|17,1|22,3|25,1|26,1|27,1|48,1:307.266:326.675,113.385:0.242928,10.4355:5.27967e-17,3.53169e-05,0.999964
-chr1	9839831	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9839872;RU=tg;PERIOD=2;REF=21.0;EXPTHRESH=21	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/2:15:0.141619:27,27:23-27,23-27:2,7,0,5:27,2:5,2|7,1|8,1|21,1:113.089:366.612,131.36:0.778346,0.778346:0.0,0.0,1.0	1/0:36:0.679783:20,21:17-21,21-22:14,9,0,9:20,6|21,8:5,1|9,1|10,1|13,2|15,2|16,1|20,1:225.393:326.675,113.385:1.12139,0.433614:2.84722e-07,0.680048,0.319968
-chr1	9840939	.	GGCAGGCAGGCA	GGCAGGCAGGCAGGCAGGCAGGCA	.	.	END=9840950;RU=ggca;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:5:0.00129243:6,6:2-26,2-26:0,5,0,0:NULL:NULL:47.1789:366.612,131.36:9.54068,9.54068:0.00160588,0.112949,0.885551	0/0:43:1.0:3,3:3-3,3-3:26,14,0,3:3,26:2,3:250.977:326.675,113.385:0.0,0.0:0.0,5.21674e-08,1.0
-chr1	9841455	.	ATTTATTTATTT	.	.	.	END=9841466;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:14:0.745145:3,3:3-3,3-3:5,9,0,0:3,5:NULL:102.013:366.612,131.36:0.19802,0.19802:3.2461e-17,0.128006,0.872092	0/0:34:1.0:3,3:3-3,3-3:18,13,0,3:3,18:2,3:211.788:326.675,113.385:0.0,0.0:0.0,7.91138e-06,0.999994
-chr1	9844142	.	TTTGTTTTGTTTTGT	.	.	.	END=9844156;RU=tttgt;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:1.00001:3,3:3-3,3-3:22,13,0,0:3,22:NULL:214.616:366.612,131.36:0.0,0.0:0.0,3.18974e-06,1.0	0/0:31:0.999995:3,3:3-3,3-3:19,12,0,0:3,19:NULL:184.375:326.675,113.385:0.0,0.0:0.0,1.24004e-05,0.999987
-chr1	9845384	.	TTTGTTTGTTTGTTTG	.	.	.	END=9845399;RU=tttg;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:0.998791:4,4:4-4,4-4:13,17,0,4:4,13:2,1|3,3:239.939:366.612,131.36:0.0,0.0:1.195e-42,0.000582992,0.999422	0/0:39:1.00001:4,4:4-4,4-4:22,13,0,4:4,22:3,4:234.074:326.675,113.385:0.0,0.0:0.0,8.18899e-07,1.0
-chr1	9849556	.	ATAAATAAATAA	.	.	.	END=9849567;RU=ataa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999492:3,3:3-3,3-3:14,6,0,3:3,14:2,3:130.899:366.612,131.36:0.0,0.0:0.0,0.000200496,0.999803	0/0:33:1.00001:3,3:3-3,3-3:21,10,0,2:3,21:2,2:190.533:326.675,113.385:0.0,0.0:0.0,2.51299e-06,1.0
-chr1	9852948	.	GTGTGTGTGTGT	.	.	.	END=9852959;RU=gt;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:50:1.0:6,6:6-6,6-6:25,20,0,4:6,25:4,1|5,3:310.852:366.612,131.36:0.139319,0.139319:0.0,1.32196e-07,1.0	0/0:80:1.0:6,6:6-6,6-6:52,20,0,7:6,52:4,1|5,5|6,1:443.199:326.675,113.385:0.0,0.0:0.0,6.31683e-16,1.0
-chr1	9853686	.	TGGGGGTGGGGGTGGGGG	.	.	.	END=9853703;RU=tggggg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:16:0.997794:3,3:3-3,3-3:12,4,0,0:3,12:NULL:85.2044:366.612,131.36:0.0,0.0:3.32937e-37,0.0011244,0.998877	0/0:24:0.999793:3,3:3-3,3-3:15,9,0,0:3,15:NULL:143.883:326.675,113.385:0.0,0.0:0.0,0.000124373,0.999879
-chr1	9854454	.	GGTGTGGGTGTGGGTGTG	.	.	.	END=9854471;RU=ggtgtg;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999504:3,3:3-3,3-3:15,24,0,0:3,15:NULL:283.829:366.612,131.36:0.0,0.0:0.0,0.000434667,0.999568	0/0:46:1.0:3,3:3-3,3-3:28,16,0,2:3,28:2,2:277.364:326.675,113.385:0.0,0.0:0.0,2.70576e-08,1.0
-chr1	9855719	.	AAAACAAAACAAAAC	.	.	.	END=9855733;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:1.0:3,3:3-3,3-3:20,24,0,3:3,20:2,3:313.064:366.612,131.36:0.0,0.0:0.0,9.3561e-06,0.999993	0/0:42:1.0:3,3:3-3,3-3:25,17,0,0:3,25:NULL:254.18:326.675,113.385:0.0,0.0:0.0,3.36552e-07,1.0
-chr1	9856153	.	TCTCTGTCTCTGTCTCTGTCTCTG	.	.	.	END=9856176;RU=tctctg;PERIOD=6;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999708:4,4:4-4,4-4:15,16,0,2:4,15:3,2:226.754:366.612,131.36:0.0,0.0:0.0,0.000228585,0.999773	0/0:35:1.00001:4,4:4-4,4-4:22,11,0,2:4,22:2,1|3,1:200.712:326.675,113.385:0.0,0.0:0.0,1.50182e-06,1.0
-chr1	9856692	.	TTGGTTGGTTGG	.	.	.	END=9856703;RU=ttgg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.0:3,3:3-3,3-3:20,16,0,0:3,20:NULL:225.147:366.612,131.36:0.0,0.0:0.0,6.00121e-06,0.999995	0/0:38:1.00001:3,3:3-3,3-3:20,16,0,2:3,20:2,2:242.701:326.675,113.385:0.0,0.0:0.0,3.8504e-06,1.0
-chr1	9861552	.	CACACACACACA	.	.	.	END=9861563;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.996689:6,6:6-6,6-6:12,17,0,0:6,12:NULL:199.806:366.612,131.36:0.0,0.0:1.73761e-30,0.00195815,0.998049	0/0:28:0.999915:6,6:6-6,6-6:17,11,0,0:6,17:NULL:168.335:326.675,113.385:0.0,0.0:5.68e-43,5.40906e-05,0.999948
-chr1	9862138	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9862197;RU=tc;PERIOD=2;REF=30.0;EXPTHRESH=30	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:20:0.283346:28,34:28-34,28-35:2,12,0,6:28,2:11,1|20,1|27,2|32,2:173.596:366.612,131.36:1.98781,2.06212:1.3212e-14,0.996905,0.00310473	0/3:23:0.243131:30,37:30-37,30-39:2,8,0,12:30,2:5,2|8,2|15,1|21,1|23,1|24,1|26,1|27,1|31,1|36,1:182.082:326.675,113.385:1.48138,3.03113:6.09945e-17,0.00714323,0.992873
-chr1	9863057	.	GTTGTTGTTGTT	.	.	.	END=9863068;RU=gtt;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:222.293:366.612,131.36:0.0,0.0:0.0,3.25984e-07,1.0	0/0:44:1.0:4,4:4-4,4-4:30,14,0,0:4,30:NULL:248.583:326.675,113.385:0.0,0.0:0.0,1.11874e-08,1.0
-chr1	9864594	.	CACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACA	.	.	END=9864631;RU=ca;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:45:0.999921:14,14:14-14,14-14:22,14,0,9:13,2|14,20:6,2|9,2|11,2|12,1|13,2:289.763:366.612,131.36:0.0,0.0:1.0,0.0,0.0	0/0:37:0.675596:19,19:18-19,18-19:14,11,0,12:18,4|19,10:7,3|8,1|11,1|12,2|13,1|15,1|18,2|19,1:265.578:326.675,113.385:0.484441,0.484441:1.43435e-18,0.32366,0.676349
-chr1	9867773	.	CACACACACACACACACACACACACACACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9867818;RU=ca;PERIOD=2;REF=23.0;EXPTHRESH=23	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:16:0.611123:24,25:23-24,23-25:9,6,0,0:23,3|24,4|25,2:NULL:108.064:366.612,131.36:0.509492,0.987918:2.54692e-12,0.0019901,0.998018	0/3:58:0.323888:23,30:22-23,22-31:17,13,0,26:22,7|23,10:5,1|7,3|9,2|10,1|11,1|12,1|13,1|15,1|17,4|18,3|19,1|20,1|21,4|26,1|30,1:432.974:326.675,113.385:0.236383,3.65447:3.68409e-18,4.2178e-08,1.0
-chr1	9869113	.	AAACAAACAAAC	.	.	.	END=9869124;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:1.0:3,3:3-3,3-3:20,12,0,0:3,20:NULL:190.381:366.612,131.36:0.0,0.0:0.0,4.82552e-06,0.999995	0/0:48:1.0:3,3:3-3,3-3:29,16,0,3:3,29:2,3:287.382:326.675,113.385:0.0,0.0:0.0,5.28486e-09,1.0
-chr1	9869920	.	TTATTTATTTAT	TTATTTAT	.	.	END=9869931;RU=ttat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:38:1.0:2,2:2-2,2-2:19,19,0,0:2,19:NULL:248.076:366.612,131.36:0.0,0.0:0.999994,7.2952e-06,0.0	0/0:48:1.0:3,3:3-3,3-3:27,18,0,3:3,27:2,3:295.033:326.675,113.385:0.0,0.0:0.0,3.15431e-08,1.0
-chr1	9870260	.	AAAACAAAACAAAAC	.	.	.	END=9870274;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999959:3,3:3-3,3-3:17,10,0,2:3,17:2,2:178.341:366.612,131.36:0.0,0.0:0.0,2.2708e-05,0.999979	0/0:47:1.0:3,3:3-3,3-3:26,19,0,2:3,26:2,2:291.141:326.675,113.385:0.0,0.0:0.0,3.40741e-08,1.0
-chr1	9871386	.	AAACAAACAAAC	.	.	.	END=9871397;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.999952:3,3:3-3,3-3:17,5,0,2:3,17:2,2:125.436:366.612,131.36:0.0,0.0:0.0,1.64594e-05,0.999986	0/0:31:0.999928:3,3:3-3,3-3:17,14,0,0:3,17:NULL:191.988:326.675,113.385:0.0,0.0:0.0,5.03227e-05,0.999949
-chr1	9879082	.	TTAATTAATTAATTAA	.	.	.	END=9879097;RU=ttaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:1.0:4,4:4-4,4-4:20,9,0,0:4,20:NULL:159.068:366.612,131.36:0.0,0.0:0.0,6.97538e-06,0.999994	0/0:28:0.999416:4,4:2-4,2-4:14,11,0,2:4,14:2,2:168.38:326.675,113.385:0.838725,0.838725:0.0,0.000365613,0.999636
-chr1	9879249	.	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCT,CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	.	.	END=9879284;RU=ct;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:42:0.992848:15,15:14-16,14-16:16,17,0,8:14,2|15,14:5,1|9,1|10,2|13,1|14,3:289.126:366.612,131.36:0.243733,0.243733:0.99997,3.39202e-05,1.05713e-27	2/0:18:0.767584:17,18:16-18,16-18:5,8,0,4:17,2|18,3:5,1|12,1|13,1|18,1:129.478:326.675,113.385:0.680364,0.40047:3.97845e-11,0.813711,0.186351
-chr1	9879878	.	AAATAAATAAAT	.	.	.	END=9879889;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999975:3,3:3-3,3-3:18,23,0,0:3,18:NULL:275.822:366.612,131.36:0.0,0.0:0.0,2.97102e-05,0.999971	0/0:18:0.999676:3,3:3-3,3-3:15,3,0,0:3,15:NULL:87.7982:326.675,113.385:0.0,0.0:0.0,0.000170969,0.999833
-chr1	9881346	.	AAACAAACAAAC	.	.	.	END=9881357;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:31:0.99988:3,3:3-3,3-3:16,13,0,2:3,16:2,2:195.991:366.612,131.36:0.0,0.0:0.0,7.08186e-05,0.999933	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:169.089:326.675,113.385:0.0,0.0:0.0,5.3849e-06,0.999995
-chr1	9882998	.	AGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAG	.	.	END=9883013;RU=ag;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.899765:11,11:10-11,10-11:20,15,0,0:10,4|11,16:NULL:232.783:366.612,131.36:0.496236,0.496236:0.0,5.84748e-06,0.999995	0/0:46:0.999933:8,8:7-8,7-8:27,19,0,0:7,3|8,24:NULL:287.503:326.675,113.385:0.195027,0.195027:1.96e-43,6.88518e-05,0.999933
-chr1	9885007	.	AAATAAATAAAT	.	.	.	END=9885018;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999448:3,3:3-3,3-3:14,12,0,0:3,14:NULL:163.404:366.612,131.36:0.0,0.0:0.0,0.000289629,0.999712	0/0:43:1.0:3,3:3-3,3-3:24,19,0,0:3,24:NULL:265.343:326.675,113.385:0.0,0.0:0.0,6.64981e-07,1.0
-chr1	9885057	.	AAGCAAGCAAGCAAGC	.	.	.	END=9885072;RU=aagc;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999615:4,4:4-4,4-4:14,13,0,2:4,14:3,2:183.777:366.612,131.36:0.0,0.0:0.0,0.000180652,0.99982	0/0:49:1.0:4,4:4-4,4-4:22,22,0,5:4,22:2,1|3,4:322.98:326.675,113.385:0.0,0.0:0.0,9.46111e-07,1.0
-chr1	9885469	.	AAACAAACAAACAAACAAAC	.	.	.	END=9885488;RU=aaac;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999674:5,5:5-5,5-5:15,23,0,2:5,15:3,1|4,1:286.081:366.612,131.36:0.0,0.0:0.0,0.000260613,0.999742	0/0:32:0.999898:5,5:5-5,5-5:16,12,0,4:5,16:2,1|4,3:208.683:326.675,113.385:0.0,0.0:0.0,5.205e-05,0.999949
-chr1	9887284	.	GTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9887299;RU=gt;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:51:0.209314:14,14:8-14,8-14:2,44,0,4:14,2:4,1|7,1|12,2:449.64:366.612,131.36:1.88218,1.88218:0.0,0.0,1.0	0/0:48:1.00001:8,8:8-8,8-8:22,23,0,2:8,22:6,2:333.026:326.675,113.385:0.0,0.0:2.00117e-39,1.37359e-06,1.0
-chr1	9887485	.	AACAACAACAAC	AAC,AACAACAAC	.	.	END=9887496;RU=aac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:12:0.0586291:1,3:3-6,3-6:0,10,0,0:NULL:NULL:97.0339:366.612,131.36:1.11394,1.06646:0.245824,0.507488,0.246708	0/0:39:1.0:4,4:4-4,4-4:25,14,0,0:4,25:NULL:224.506:326.675,113.385:0.0,0.0:0.0,2.42337e-07,1.0
-chr1	9890042	.	TTACTTACTTAC	.	.	.	END=9890053;RU=ttac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:51:1.0:3,3:3-3,3-3:29,22,0,0:3,29:NULL:313.361:366.612,131.36:0.0,0.0:0.0,3.53268e-08,1.0	0/0:45:1.0:3,3:3-3,3-3:29,16,0,0:3,29:NULL:258.912:326.675,113.385:0.0,0.0:0.0,1.2277e-08,1.0
-chr1	9892145	.	TGCTTGCTTGCT	.	.	.	END=9892156;RU=tgct;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999911:3,3:3-3,3-3:17,6,0,0:3,17:NULL:119.963:366.612,131.36:0.0,0.0:0.0,5.25139e-05,0.999948	0/0:41:1.0:3,3:3-3,3-3:28,13,0,0:3,28:NULL:222.228:326.675,113.385:0.0,0.0:0.0,1.95093e-08,1.0
-chr1	9893504	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9893541;RU=tg;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:28:0.0238588:1,1:1-7,1-7:0,28,0,0:NULL:NULL:259.638:366.612,131.36:1.75429,1.75429:0.97156,0.0284034,8.91644e-05	0/2:52:0.297224:19,24:19-19,19-25:17,15,0,18:18,2|19,15:5,1|6,1|7,3|8,2|9,1|10,1|12,1|13,3|15,1|16,2|18,1|24,1:372.061:326.675,113.385:0.0,2.45313:2.49488e-16,1.29365e-05,0.999987
-chr1	9893935	.	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	TC,TCTC,TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	.	.	END=9893984;RU=tc;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:8:0.00457127:1,2:1-7,1-7:0,8,0,0:NULL:NULL:67.714:366.612,131.36:2.33974,2.32123:0.544137,0.406993,0.0490268	0/3:38:0.376588:25,27:22-25,22-28:4,22,0,12:25,4:11,2|12,1|14,2|15,1|17,2|18,1|21,1|22,1|27,1:312.196:326.675,113.385:0.5093,1.40594:2.97015e-12,0.000131841,0.999872
-chr1	9898438	.	GTATGTATGTAT	.	.	.	END=9898449;RU=gtat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.978492:3,3:3-3,3-3:9,14,0,0:3,9:NULL:166.738:366.612,131.36:0.0,0.0:1.9341e-33,0.0150783,0.984951	0/0:42:1.0:3,3:3-3,3-3:25,15,0,2:3,25:2,2:259.815:326.675,113.385:0.0,0.0:0.0,1.99488e-07,1.0
-chr1	9901685	.	TTTGTTTGTTTG	.	.	.	END=9901696;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.956383:3,3:3-3,3-3:8,19,0,0:3,8:NULL:204.764:366.612,131.36:0.0,0.0:4.14176e-25,0.0298128,0.970245	0/0:37:1.00001:3,3:3-3,3-3:21,13,0,3:3,21:2,3:227.902:326.675,113.385:0.0,0.0:0.0,1.54881e-06,1.0
-chr1	9902992	.	CAGCCAGCCAGC	.	.	.	END=9903003;RU=cagc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:17:0.493114:3,3:1-3,1-3:4,13,0,0:3,4:NULL:138.826:366.612,131.36:0.464609,0.464609:6.93932e-13,0.263274,0.736731	0/0:18:0.891041:3,3:3-3,3-3:7,11,0,0:3,7:NULL:128.4:326.675,113.385:0.0,0.0:4.43637e-22,0.0645661,0.935524
-chr1	9903318	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9903365;RU=gt;PERIOD=2;REF=24.0;EXPTHRESH=24	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:45:0.411727:25,28:25-25,25-28:7,24,0,13:25,7:7,1|8,1|10,1|11,2|14,1|15,1|19,1|21,1|22,1|24,1|25,1|28,1:363.359:366.612,131.36:0.0,1.47853:1.40748e-31,1.59087e-07,1.0	0/1:50:0.996071:24,25:24-25,24-25:16,16,0,18:23,2|24,9|25,5:5,2|6,1|7,1|8,1|9,4|11,1|13,1|14,2|16,1|19,1|20,1|21,1|22,1:377.873:326.675,113.385:0.195027,0.345543:1.73537e-16,5.01236e-05,0.999949
-chr1	9905688	.	TAAATAAATAAA	.	.	.	END=9905699;RU=taaa;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:245.165:366.612,131.36:0.0,0.0:0.0,6.23891e-06,0.999995	0/0:26:0.999304:3,3:3-3,3-3:14,12,0,0:3,14:NULL:166.728:326.675,113.385:0.0,0.0:0.0,0.000467848,0.999537
-chr1	9908942	.	CTGTCTGTCTGT	.	.	.	END=9908953;RU=ctgt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:35:0.999835:3,3:3-3,3-3:16,19,0,0:3,16:NULL:238.973:366.612,131.36:0.0,0.0:0.0,9.62251e-05,0.999904	0/0:38:1.0:3,3:3-3,3-3:20,18,0,0:3,20:NULL:254.86:326.675,113.385:0.0,0.0:0.0,9.79986e-06,0.999993
-chr1	9909330	.	GTTTTGTTTTGTTTTGTTTT	.	.	.	END=9909349;RU=gtttt;PERIOD=5;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999896:4,4:4-4,4-4:17,21,0,0:4,17:NULL:262.052:366.612,131.36:0.0,0.0:0.0,9.88637e-05,0.999903	0/0:23:0.999776:4,4:4-4,4-4:15,4,0,4:4,15:2,2|3,2:126.019:326.675,113.385:0.0,0.0:2e-44,8.28355e-05,0.999918
-chr1	9909905	.	TGGTGGTGGTGGTGG	.	.	.	END=9909919;RU=tgg;PERIOD=3;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999914:5,5:5-5,5-5:16,15,0,2:5,16:4,2:213.466:366.612,131.36:0.0,0.0:0.0,4.13652e-05,0.999962	0/0:37:1.00001:5,5:5-5,5-5:21,14,0,2:5,21:4,2:225.98:326.675,113.385:0.0,0.0:0.0,1.89249e-06,1.0
-chr1	9910263	.	ATGTATGTATGTATGTATGTATGTATGTATGT	ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT,ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGT	.	.	END=9910294;RU=atgt;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:36:1.0:11,12:11-11,12-12:13,18,0,5:11,7|12,6:4,1|9,1|10,1|11,2:268.62:366.612,131.36:0.0990099,0.0:0.0,0.0,1.0	0/0:57:1.0:8,8:8-9,8-9:22,22,0,11:8,22:2,1|3,1|4,4|5,1|7,4:372.409:326.675,113.385:0.169767,0.169767:0.0,1.6759e-06,1.0
-chr1	9911074	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9911103;RU=tg;PERIOD=2;REF=15.0;EXPTHRESH=15	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.940177:21,21:20-21,20-21:11,12,0,16:20,2|21,9:5,1|7,2|11,1|12,1|13,2|14,3|15,1|18,1|19,1|20,3:293.216:366.612,131.36:0.422623,0.422623:0.0,0.0,1.0	0/0:50:0.995963:15,15:14-16,14-16:23,16,0,9:13,2|14,3|15,18:6,1|9,2|11,2|12,1|13,1|14,2:331.675:326.675,113.385:0.430892,0.430892:3.29582e-21,0.00404109,0.995968
-chr1	9911501	.	TTGTTGTTGTTG	TTG	.	.	END=9911512;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:17:0.0667818:1,1:1-3,1-3:0,17,0,0:NULL:NULL:153.882:366.612,131.36:0.461008,0.461008:0.326566,0.517452,0.156012	0/0:25:0.999989:4,4:4-4,4-4:18,5,0,2:4,18:3,2:133.462:326.675,113.385:0.0,0.0:0.0,1.61308e-05,0.999986
-chr1	9913930	.	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	.	.	END=9913979;RU=ag;PERIOD=2;REF=25.0;EXPTHRESH=25	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:26:0.600148:19,19:18-19,18-19:5,14,0,6:19,5:6,1|8,1|11,1|12,1|13,2:197.352:366.612,131.36:0.352842,0.352842:1.0,0.0,0.0	0/0:39:0.284415:25,25:12-25,12-25:6,20,0,11:24,2|25,4:5,1|9,2|11,3|12,1|13,1|16,2|21,1:300.186:326.675,113.385:5.37526,5.37526:0.00137437,0.683164,0.31548
-chr1	9914697	.	TTATTTATTTATTTATTTATTTATTTAT	TTATTTATTTATTTATTTATTTATTTATTTATTTAT	.	.	END=9914724;RU=ttat;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:23:0.936097:9,9:9-9,9-9:7,13,0,3:9,7:4,1|7,1|8,1:170.463:366.612,131.36:0.0,0.0:1.69215e-38,0.00880929,0.99121	0/0:20:0.999825:7,7:7-7,7-7:16,4,0,0:7,16:NULL:106.409:326.675,113.385:0.0,0.0:1.23276e-40,0.000110242,0.999894
-chr1	9914909	.	TATTTATTTATT	.	.	.	END=9914920;RU=tatt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:26:0.999952:3,3:3-3,3-3:17,9,0,0:3,17:NULL:149.228:366.612,131.36:0.0,0.0:0.0,3.09509e-05,0.999971	0/0:38:1.00001:3,3:3-3,3-3:20,15,0,3:3,20:2,3:237.639:326.675,113.385:0.0,0.0:0.0,2.51367e-06,1.0
-chr1	9916204	.	ACAAACAAACAAACAAACAAACAA	.	.	.	END=9916227;RU=acaa;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:0.999805:6,6:6-6,6-6:15,17,0,5:6,15:3,1|4,1|5,3:258.758:366.612,131.36:0.0,0.0:1.112e-41,0.000114363,0.999887	0/0:42:1.0:6,6:6-6,6-6:22,14,0,6:6,22:3,1|4,1|5,4:270.528:326.675,113.385:0.0,0.0:0.0,5.54593e-07,1.0
-chr1	9916809	.	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	.	.	END=9916844;RU=tg;PERIOD=2;REF=18.0;EXPTHRESH=18	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:43:0.354926:21,22:21-23,22-23:8,24,0,11:21,3|22,3|23,2:5,2|9,3|11,1|12,1|14,1|15,1|16,1|21,1:359.386:366.612,131.36:0.969893,0.494455:0.0,0.0,1.0	0/0:27:0.987027:18,18:17-19,17-19:14,9,0,3:17,2|18,12:7,1|9,1|15,1:173.626:326.675,113.385:0.329868,0.329868:9.77748e-14,0.0120442,0.987981
-chr1	9918705	.	ATTTATTTATTT	.	.	.	END=9918716;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:0.999363:3,3:3-3,3-3:14,20,0,2:3,14:2,2:254.897:366.612,131.36:0.0,0.0:0.0,0.00037565,0.999628	0/0:39:1.0:3,3:3-3,3-3:23,11,0,5:3,23:2,5:223.823:326.675,113.385:0.0,0.0:0.0,2.44769e-07,1.0
-chr1	9920939	.	CACCACCACCAC	.	.	.	END=9920950;RU=cac;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:28:0.997915:4,4:4-4,4-4:12,13,0,3:4,12:3,3:186.52:366.612,131.36:0.0,0.0:9.20825e-40,0.000727877,0.999278	0/0:25:0.999758:4,4:4-4,4-4:15,8,0,2:4,15:3,2:148.712:326.675,113.385:0.0,0.0:0.0,0.000113113,0.999888
-chr1	9922186	.	GTTTGTTTGTTTGTTT	.	.	.	END=9922201;RU=gttt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.00001:4,4:4-4,4-4:23,14,0,4:4,23:2,3|3,1:250.895:366.612,131.36:0.0,0.0:0.0,6.67579e-07,1.0	0/0:42:1.00001:4,4:4-4,4-4:22,15,0,5:4,22:2,2|3,3:261.244:326.675,113.385:0.0,0.0:0.0,9.56311e-07,1.0
-chr1	9923740	.	AAACAAACAAAC	.	.	.	END=9923751;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:26,13,0,0:3,26:NULL:221.137:366.612,131.36:0.0,0.0:0.0,7.15839e-08,1.0	0/0:32:1.00001:3,3:3-3,3-3:22,8,0,2:3,22:2,2:173.336:326.675,113.385:0.0,0.0:0.0,9.15984e-07,1.0
-chr1	9926111	.	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCC	.	.	.	END=9926146;RU=tgcc;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:56:1.0:9,9:9-9,9-9:26,27,0,3:9,26:5,1|6,2:385.972:366.612,131.36:0.0,0.0:0.0,3.23186e-07,1.0	0/0:60:1.0:9,9:9-9,9-9:30,16,0,14:9,30:2,1|3,4|4,2|5,2|6,2|7,1|8,2:372.654:326.675,113.385:0.0,0.0:0.0,2.1782e-09,1.0
-chr1	9927265	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACAC,ACACACACACACACACACACACACACACACAC	.	.	END=9927298;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:46:0.999983:8,8:8-8,8-8:20,23,0,3:8,20:5,2|7,1:316.603:366.612,131.36:0.0,0.0:1.0,0.0,0.0	2/0:46:0.938:16,17:16-18,17-17:23,16,0,6:16,7|17,14|18,2:6,1|10,1|11,1|14,2|15,1:321.003:326.675,113.385:0.589421,0.0:5.79561e-16,0.937993,0.0620969
-chr1	9928606	.	CAAACAAACAAACAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAA,CAAACAAACAAACAAACAAACAAACAAA	.	.	END=9928637;RU=caaa;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:37:0.999999:6,7:6-6,6-7:27,8,0,2:6,20|7,7:5,1|6,1:217.641:366.612,131.36:0.0,0.298675:1.0,1.35717e-12,0.0	0/0:47:1.0:8,8:8-8,8-8:19,16,0,12:8,19:2,1|3,2|5,4|6,1|7,4:310.491:326.675,113.385:0.0,0.0:7.54194e-38,6.13532e-06,0.999994
-chr1	9929327	.	ATTTATTTATTT	.	.	.	END=9929338;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:21:0.999178:3,3:3-3,3-3:13,8,0,0:3,13:NULL:123.782:366.612,131.36:0.0,0.0:5.32e-43,0.000467032,0.999537	0/0:37:1.0:3,3:3-3,3-3:19,16,0,2:3,19:2,2:226.484:326.675,113.385:0.0,0.0:0.0,6.84549e-06,0.999994
-chr1	9931528	.	GTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9931551;RU=gt;PERIOD=2;REF=12.0;EXPTHRESH=12	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:28:0.300779:25,27:24-25,24-27:3,10,0,14:25,3:6,1|7,1|8,2|11,1|12,2|14,2|22,2|23,1|24,1|27,1:213.196:366.612,131.36:0.414188,1.25785:0.0,0.0,1.0	0/0:54:0.999892:12,12:12-12,12-12:25,20,0,8:11,3|12,22:6,3|8,2|9,1|10,2:355.594:326.675,113.385:0.0990099,0.0990099:4.0669e-29,0.000110906,0.999889
-chr1	9932293	.	CATGCATGCATG	.	.	.	END=9932304;RU=catg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999915:3,3:3-3,3-3:17,10,0,0:3,17:NULL:159.901:366.612,131.36:0.0,0.0:0.0,4.9656e-05,0.999949	0/0:27:1.0:3,3:3-3,3-3:24,3,0,0:3,24:NULL:123.691:326.675,113.385:0.0,0.0:0.0,3.65319e-07,1.0
-chr1	9932642	.	TTGTTGTTGTTG	.	.	.	END=9932653;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.998884:4,4:4-4,4-4:14,26,0,0:4,14:NULL:306.3:366.612,131.36:0.0,0.0:0.0,0.000958701,0.999044	0/0:51:1.0:4,4:4-4,4-4:36,13,0,2:4,36:3,2:276.95:326.675,113.385:0.0,0.0:0.0,6.98338e-11,1.0
-chr1	9932828	.	ATTTATTTATTT	.	.	.	END=9932839;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:22,32,0,0:3,22:NULL:379.475:366.612,131.36:0.0,0.0:0.0,1.63408e-06,1.0	0/0:57:1.0:3,3:3-3,3-3:30,23,0,4:3,30:2,4:361.396:326.675,113.385:0.0,0.0:0.0,6.78511e-09,1.0
-chr1	9934352	.	AATAAATAAATA	AATA	.	.	END=9934363;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:18:0.12816:1,1:1-2,1-2:0,18,0,0:NULL:NULL:181.554:366.612,131.36:0.48807,0.48807:0.324607,0.534066,0.141371	0/0:40:1.0:3,3:3-3,3-3:24,13,0,3:3,24:2,3:234.426:326.675,113.385:0.0,0.0:0.0,2.12861e-07,1.0
-chr1	9935825	.	AATAAATAAATA	.	.	.	END=9935836;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.999946:3,3:3-3,3-3:17,9,0,3:3,17:2,3:174.81:366.612,131.36:0.0,0.0:0.0,2.60871e-05,0.999978	0/0:30:1.0:3,3:3-3,3-3:20,10,0,0:3,20:NULL:168.481:326.675,113.385:0.0,0.0:0.0,6.61641e-06,0.999994
-chr1	9936450	.	CACACACACACACACACACA	CACACACACACACACACACACACACACACACACACACACACACACACACACACACACA	.	.	END=9936469;RU=ca;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:54:0.754773:29,29:14-30,14-30:5,26,0,21:29,5:6,1|9,2|11,2|13,1|15,1|16,1|17,3|19,1|21,1|22,1|24,3|25,1|26,1|27,2:431.551:366.612,131.36:7.38805,7.38805:0.0,0.0,1.0	0/0:46:0.999835:10,10:10-10,10-10:25,10,0,10:9,2|10,23:5,1|7,3|8,1|9,5:282.769:326.675,113.385:0.0,0.0:2.73707e-27,0.000164869,0.999835
-chr1	9937602	.	AGACAGACAGAC	.	.	.	END=9937613;RU=agac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:43:1.0:3,3:3-3,3-3:26,15,0,2:3,26:2,2:251.557:366.612,131.36:0.0,0.0:0.0,5.17987e-08,1.0	0/0:55:1.0:3,3:3-3,3-3:38,17,0,0:3,38:NULL:306.04:326.675,113.385:0.0,0.0:0.0,3.47401e-11,1.0
-chr1	9938474	.	ATTTATTTATTT	.	.	.	END=9938485;RU=attt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:32:0.998051:3,3:3-3,3-3:12,20,0,0:3,12:NULL:227.664:366.612,131.36:0.0,0.0:2.00917e-35,0.00146511,0.998541	0/0:35:1.00001:3,3:3-3,3-3:21,14,0,0:3,21:NULL:201.908:326.675,113.385:0.0,0.0:0.0,3.09853e-06,1.0
-chr1	9944919	.	AAAGAAAGAAAGAAAG	.	.	.	END=9944934;RU=aaag;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.291195:4,4:1-4,1-4:4,21,0,0:4,4:NULL:210.783:366.612,131.36:1.42918,1.42918:4.83796e-12,0.605732,0.394331	0/0:22:0.998394:4,4:4-4,4-4:13,9,0,0:4,13:NULL:133.016:326.675,113.385:0.0,0.0:1.19106e-38,0.00113158,0.998875
-chr1	9945172	.	AAATAAATAAAT	AAATAAATAAATAAAT	.	.	END=9945183;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/1:25:0.94616:3,4:3-3,3-4:14,9,0,2:3,12|4,2:2,2:162.388:366.612,131.36:0.0,0.499779:4.32895e-35,1.41116e-05,0.999987	0/0:23:0.999466:3,3:3-3,3-3:14,9,0,0:3,14:NULL:135.122:326.675,113.385:0.0,0.0:1.65127e-37,0.000301198,0.999704
-chr1	9946807	.	ATTTATTTATTTATTT	.	.	.	END=9946822;RU=attt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:1.0:4,4:4-4,4-4:23,18,0,0:4,23:NULL:256.771:366.612,131.36:0.0,0.0:0.0,1.9099e-06,1.0	0/0:24:0.997971:4,4:4-4,4-4:12,9,0,3:4,12:3,3:150.242:326.675,113.385:0.0,0.0:4.41124e-35,0.000867772,0.999135
-chr1	9947166	.	TCTCTCTCTCTC	.	.	.	END=9947177;RU=tc;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:24:0.996535:6,6:6-6,6-6:12,12,0,0:6,12:NULL:156.996:366.612,131.36:0.0,0.0:1.88734e-26,0.0018215,0.998185	0/0:24:0.999224:6,6:6-6,6-6:14,10,0,0:6,14:NULL:147.189:326.675,113.385:0.0,0.0:9.76726e-31,0.000426219,0.999576
-chr1	9948124	.	ACACACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACAC	.	.	END=9948161;RU=ac;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:67:0.9884:20,20:19-20,19-20:25,25,0,15:19,6|20,19:5,2|8,2|10,1|13,2|14,2|15,1|16,2|19,2|20,1:474.865:366.612,131.36:0.407748,0.407748:0.0,3.44628e-07,1.0	0/0:46:0.71969:19,19:14-21,14-21:22,12,0,10:17,2|18,5|19,15:4,1|6,4|9,1|10,1|13,1|18,2:308.056:326.675,113.385:1.22324,1.22324:1.63252e-15,0.280307,0.719693
-chr1	9948680	.	GCTAGCTAGCTA	.	.	.	END=9948691;RU=gcta;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:36:1.00001:3,3:3-3,3-3:22,14,0,0:3,22:NULL:215.978:366.612,131.36:0.0,0.0:0.0,1.10919e-06,1.0	0/0:27:0.999737:3,3:3-3,3-3:15,10,0,2:3,15:2,2:164.22:326.675,113.385:0.0,0.0:0.0,0.000118598,0.999881
-chr1	9949344	.	GGAGGGAGGGAG	.	.	.	END=9949355;RU=ggag;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:42:1.0:3,3:3-3,3-3:23,19,0,0:3,23:NULL:267.64:366.612,131.36:0.0,0.0:0.0,1.65122e-06,1.0	0/0:24:0.99956:3,3:3-3,3-3:14,10,0,0:3,14:NULL:148.374:326.675,113.385:0.0,0.0:0.0,0.000285647,0.999719
-chr1	9949792	.	CACACACACACA	CACACACACACACA	.	.	END=9949803;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:31:0.828594:7,7:6-8,6-8:7,22,0,0:7,7:NULL:230.641:366.612,131.36:0.806551,0.806551:3.48337e-18,0.105813,0.894289	0/0:32:0.75241:6,6:6-7,6-7:16,16,0,0:6,14|7,2:NULL:225.665:326.675,113.385:0.472558,0.472558:5.09718e-31,0.000158717,0.999842
-chr1	9952017	.	AATTAATTAATTAATT	.	.	.	END=9952032;RU=aatt;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:0.999444:4,4:4-4,4-4:14,26,0,0:4,14:NULL:294.719:366.612,131.36:0.0,0.0:1.99e-43,0.000478412,0.999523	0/0:24:0.998082:4,4:4-4,4-4:13,11,0,0:4,13:NULL:147.239:326.675,113.385:0.0,0.0:8.69591e-40,0.00148927,0.998518
-chr1	9954129	.	AAATAAATAAATAAAT	.	.	.	END=9954144;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:0.999395:4,4:4-4,4-4:14,19,0,0:4,14:NULL:228.251:366.612,131.36:0.0,0.0:0.0,0.000436763,0.999567	0/0:30:0.999958:4,4:4-4,4-4:17,9,0,4:4,17:2,1|3,3:176.546:326.675,113.385:0.0,0.0:0.0,2.22757e-05,0.999979
-chr1	9955647	.	AAAACAAAACAAAAC	.	.	.	END=9955661;RU=aaaac;PERIOD=5;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:0.999977:3,3:3-3,3-3:18,20,0,0:3,18:NULL:256.039:366.612,131.36:0.0,0.0:0.0,3.37449e-05,0.99997	0/0:44:1.0:3,3:3-3,3-3:23,21,0,0:3,23:NULL:298.006:326.675,113.385:0.0,0.0:0.0,2.53549e-06,1.0
-chr1	9956363	.	TGTGTGTGTGTG	.	.	.	END=9956374;RU=tg;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:47:0.599682:6,6:6-10,6-10:27,17,0,3:6,27:5,2|7,1:299.204:366.612,131.36:1.03739,1.03739:0.0,1.96076e-08,1.0	0/0:35:1.0:6,6:5-6,5-6:24,8,0,2:6,24:5,2:186.469:326.675,113.385:0.169767,0.169767:0.0,2.89937e-07,1.0
-chr1	9956833	.	TTTCTTTCTTTC	.	.	.	END=9956844;RU=tttc;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:40:1.00001:3,3:2-3,2-3:22,17,0,0:3,22:NULL:240.663:366.612,131.36:0.270063,0.270063:0.0,1.76112e-06,1.0	0/0:34:1.00001:3,3:3-3,3-3:23,11,0,0:3,23:NULL:194.583:326.675,113.385:0.0,0.0:0.0,8.88355e-07,1.0
-chr1	9958725	.	AAACCAAACCAAACCAAACCAAACC	.	.	.	END=9958749;RU=aaacc;PERIOD=5;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:41:0.999999:5,5:5-5,5-5:18,16,0,7:5,18:2,1|3,1|4,5:263.611:366.612,131.36:0.0,0.0:0.0,1.04761e-05,0.999993	0/0:41:1.0:5,5:5-5,5-5:24,14,0,3:5,24:3,1|4,2:243.839:326.675,113.385:0.0,0.0:0.0,2.1328e-07,1.0
-chr1	9964154	.	CACACACACACA	CACACACACA	.	.	END=9964165;RU=ca;PERIOD=2;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/0:44:0.973327:5,6:5-6,6-6:23,16,0,4:5,4|6,19:4,1|5,3:292.296:366.612,131.36:0.498011,0.0:1.09539e-28,0.973325,0.0267257	0/0:40:1.0:6,6:6-6,6-6:23,17,0,0:6,23:NULL:241.746:326.675,113.385:0.0,0.0:1.526e-42,1.09676e-06,1.0
-chr1	9966035	.	TATTATTATTAT	.	.	.	END=9966046;RU=tat;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:37:1.0:4,4:4-4,4-4:20,17,0,0:4,20:NULL:235.128:366.612,131.36:0.0,0.0:0.0,1.06038e-05,0.999993	0/0:28:0.999974:4,4:4-4,4-4:18,10,0,0:4,18:NULL:156.766:326.675,113.385:0.0,0.0:0.0,3.35008e-05,0.99997
-chr1	9967640	.	CCCGCCCGCCCGCCCGCCCGCCCGCCCGCCCG	CCCGCCCGCCCGCCCGCCCG	.	.	END=9967671;RU=cccg;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:49:0.999921:5,5:5-5,5-5:17,26,0,6:5,17:4,6:355.515:366.612,131.36:0.0,0.0:0.999993,9.34284e-06,0.0	0/0:69:1.0:8,8:8-8,8-8:27,33,0,9:8,27:4,2|5,4|6,1|7,2:505.436:326.675,113.385:0.0,0.0:0.0,1.28947e-07,1.0
-chr1	9969740	.	TTGTTGTTGTTGTTGTTG	TTGTTGTTGTTGTTGTTGTTG	.	.	END=9969757;RU=ttg;PERIOD=3;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:33:1.0:7,7:7-7,7-7:20,11,0,2:7,20:5,2:199.72:366.612,131.36:0.0,0.0:0.0,3.86837e-06,1.0	0/0:34:1.0:6,6:6-6,6-6:19,10,0,4:6,19:5,4:198.517:326.675,113.385:0.0990099,0.0990099:0.0,6.04175e-06,0.999994
-chr1	9970610	.	GTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9970627;RU=gt;PERIOD=2;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	2/3:32:0.279716:18,27:18-18,16-27:10,11,0,9:16,2|18,8:7,1|9,1|10,1|12,1|13,1|16,1|17,2|24,1:233.594:366.612,131.36:0.0,4.23348:0.0,0.0,1.0	0/1:30:0.362935:9,11:9-9,9-11:15,10,0,5:9,15:5,1|6,1|8,2|11,1:205.017:326.675,113.385:0.0,0.885129:1.01799e-27,4.71352e-08,1.0
-chr1	9971832	.	AAACAAACAAACAAACAAACAAACAAACAAAC	AAACAAACAAACAAACAAACAAAC	.	.	END=9971863;RU=aaac;PERIOD=4;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:27:0.992697:6,6:6-6,6-6:10,15,0,2:6,10:4,1|5,1:203.936:366.612,131.36:0.0990099,0.0990099:0.998944,0.0010614,4.04235e-28	0/0:32:0.995512:8,8:8-8,8-8:11,11,0,10:8,11:3,1|4,3|5,1|6,3|7,2:221.554:326.675,113.385:0.0,0.0:1.77565e-31,0.00219471,0.997813
-chr1	9973536	.	GTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9973555;RU=gt;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:59:0.902665:12,12:8-22,8-22:27,26,0,4:11,6|12,21:6,1|7,2|19,1:424.73:366.612,131.36:4.08502,4.08502:0.0,1.04962e-07,1.0	0/0:53:0.999501:10,10:10-11,10-11:29,14,0,8:10,26|11,3:4,2|5,1|6,1|7,2|8,1|9,1:318.327:326.675,113.385:0.236383,0.236383:1.51294e-36,3.1442e-08,1.0
-chr1	9974995	.	CCTCCCTCCCTCCCTCCCTCCCTCCCTC	CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC,CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC	.	.	END=9975022;RU=cctc;PERIOD=4;REF=7.0;EXPTHRESH=7	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/2:24:0.138925:9,12:9-12,9-12:0,18,0,5:NULL:5,2|6,1|7,1|11,1:203.91:366.612,131.36:1.41185,1.03975:0.0,0.0,1.0	0/0:43:0.946905:7,7:6-7,6-7:7,21,0,14:7,7:2,2|3,4|4,2|6,6:331.615:326.675,113.385:0.498798,0.498798:6.1531e-18,0.02783,0.972222
-chr1	9975875	.	AAACAAACAAAC	.	.	.	END=9975886;RU=aaac;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:0.999883:3,3:3-3,3-3:16,23,0,0:3,16:NULL:280.224:366.612,131.36:0.0,0.0:0.0,9.63939e-05,0.999903	0/0:38:1.0:3,3:3-3,3-3:24,11,0,3:3,24:2,3:215.89:326.675,113.385:0.0,0.0:0.0,1.27547e-07,1.0
-chr1	9977198	.	TTTGTTTGTTTG	.	.	.	END=9977209;RU=tttg;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:54:1.0:3,3:3-3,3-3:28,26,0,0:3,28:NULL:350.953:366.612,131.36:0.0,0.0:0.0,1.5997e-08,1.0	0/0:42:1.0:3,3:3-3,3-3:24,18,0,0:3,24:NULL:256.659:326.675,113.385:0.0,0.0:0.0,3.31841e-07,1.0
-chr1	9977219	.	TGTTTGTTTGTT	.	.	.	END=9977230;RU=tgtt;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:59:1.0:3,3:3-3,3-3:27,30,0,2:3,27:2,2:397.372:366.612,131.36:0.0,0.0:0.0,2.00918e-08,1.0	0/0:43:1.0:3,3:3-3,3-3:26,17,0,0:3,26:NULL:257.592:326.675,113.385:0.0,0.0:0.0,8.22526e-08,1.0
-chr1	9978977	.	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	.	.	END=9979014;RU=gt;PERIOD=2;REF=19.0;EXPTHRESH=19	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:0.896527:26,26:24-26,24-26:7,14,0,18:26,7:5,2|6,1|8,1|9,1|14,2|15,1|16,1|19,2|20,2|21,1|22,1|24,1|25,2:312.007:366.612,131.36:0.825531,0.825531:0.0,0.0,1.0	0/2:55:0.289981:19,29:19-19,19-32:16,16,0,21:19,16:5,4|7,2|8,2|9,1|10,1|11,3|12,1|13,1|14,1|15,1|17,2|20,1|29,1:399.795:326.675,113.385:0.0,4.91823:2.38919e-27,5.47478e-14,1.0
-chr1	9979016	.	AAAATAAAAATAAAAATA	.	.	.	END=9979033;RU=aaaata;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:39:1.0:3,3:3-3,3-3:22,17,0,0:3,22:NULL:246.388:366.612,131.36:0.0,0.0:0.0,2.00612e-06,1.0	0/0:48:1.0:3,3:3-3,3-3:31,15,0,2:3,31:2,2:269.157:326.675,113.385:0.0,0.0:0.0,1.91913e-09,1.0
-chr1	9980211	.	AAATAAATAAATAAAT	.	.	.	END=9980226;RU=aaat;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.999921:4,4:4-4,4-4:17,6,0,0:4,17:NULL:119.881:366.612,131.36:0.0,0.0:0.0,4.93888e-05,0.999955	0/0:31:1.00001:4,4:4-4,4-4:22,6,0,3:4,22:3,3:163.046:326.675,113.385:0.0,0.0:0.0,7.88772e-07,1.0
-chr1	9981579	.	AAATAAATAAAT	.	.	.	END=9981590;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:25:0.997694:3,3:3-3,3-3:12,13,0,0:3,12:NULL:166.886:366.612,131.36:0.0,0.0:4.75854e-37,0.00125553,0.998747	0/0:31:1.00001:3,3:3-3,3-3:21,10,0,0:3,21:NULL:174.335:326.675,113.385:0.0,0.0:0.0,3.34348e-06,1.0
-chr1	9982246	.	ACACACACACACACACACAC	ACACACACACACACACACACACACACACAC	.	.	END=9982265;RU=ac;PERIOD=2;REF=10.0;EXPTHRESH=10	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.972552:15,15:14-16,14-16:13,19,0,6:14,2|15,11:8,2|12,1|13,2|14,1:280.815:366.612,131.36:0.405095,0.405095:0.0,0.0,1.0	0/0:50:0.999953:10,10:9-10,9-10:33,12,0,5:9,5|10,26|11,2:5,1|7,2|8,1|9,1:306.31:326.675,113.385:0.242928,0.242928:7.60741e-36,3.70945e-05,0.999964
-chr1	9982521	.	TTGTTGTTGTTG	.	.	.	END=9982532;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:34:1.00001:4,4:4-4,4-4:22,9,0,3:4,22:3,3:193.373:366.612,131.36:0.0,0.0:0.0,9.32828e-07,1.0	0/0:57:1.0:4,4:4-4,4-4:45,9,0,3:4,45:3,3:280.876:326.675,113.385:0.0,0.0:0.0,7.36941e-14,1.0
-chr1	9984525	.	GCAAGAGCAAGAGCAAGA	GCAAGA	.	.	END=9984542;RU=gcaaga;PERIOD=6;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:40:1.00001:1,1:1-1,1-1:21,19,0,0:1,21:NULL:254.048:366.612,131.36:0.0,0.0:1.0,7.08224e-07,0.0	0/0:41:1.0:3,3:3-3,3-3:25,14,0,2:3,25:2,2:239.768:326.675,113.385:0.0,0.0:0.0,1.29823e-07,1.0
-chr1	9986540	.	TTGTTGTTGTTG	.	.	.	END=9986551;RU=ttg;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:53:1.00001:4,4:4-4,4-4:23,27,0,3:4,23:3,3:365.923:366.612,131.36:0.0,0.0:0.0,6.35825e-07,1.0	0/0:42:1.0:4,4:4-4,4-4:26,16,0,0:4,26:NULL:243.992:326.675,113.385:0.0,0.0:0.0,1.1716e-07,1.0
-chr1	9987209	.	AATAAATAAATAAATAAATAAATA	.	.	.	END=9987232;RU=aata;PERIOD=4;REF=6.0;EXPTHRESH=6	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:23:0.981668:6,6:5-6,5-6:9,10,0,3:6,9:2,1|4,1|5,1:150.808:366.612,131.36:0.425627,0.425627:1.86629e-24,0.0108559,0.98917	0/0:29:0.99986:6,6:6-6,6-6:16,11,0,2:6,16:5,2:179.84:326.675,113.385:0.0,0.0:6.45e-43,7.34505e-05,0.999926
-chr1	9987535	.	CAAACAAACAAACAAA	.	.	.	END=9987550;RU=caaa;PERIOD=4;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:30:0.999932:4,4:4-4,4-4:17,11,0,2:4,17:3,2:181.058:366.612,131.36:0.0,0.0:0.0,3.59208e-05,0.999964	0/0:35:0.999911:4,4:4-4,4-4:16,14,0,5:4,16:3,5:226.155:326.675,113.385:0.0,0.0:0.0,4.04958e-05,0.999963
-chr1	9989590	.	TTTGTTTGTTTGTTTGTTTG	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	.	.	END=9989609;RU=tttg;PERIOD=4;REF=5.0;EXPTHRESH=5	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:25:0.999454:8,8:8-8,8-8:15,8,0,2:8,15:3,1|5,1:155.464:366.612,131.36:0.0,0.0:0.0,0.0,1.0	0/0:36:1.0:5,5:5-5,5-5:26,8,0,2:5,26:3,1|4,1:193.06:326.675,113.385:0.0,0.0:0.0,7.69892e-08,1.0
-chr1	9989921	.	TCATCATCATCA	.	.	.	END=9989932;RU=tca;PERIOD=3;REF=4.0;EXPTHRESH=4	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:38:1.0:4,4:4-4,4-4:25,13,0,0:4,25:NULL:220.703:366.612,131.36:0.0,0.0:0.0,3.39588e-07,1.0	0/0:62:1.0:4,4:4-4,4-4:43,17,0,2:4,43:3,2:346.1:326.675,113.385:0.0,0.0:0.0,4.68102e-13,1.0
-chr1	9990327	.	ACACACACACACACACACACACACACACACACAC	ACACACACACACACACACACACACACACACACACACACACACACAC	.	.	END=9990360;RU=ac;PERIOD=2;REF=17.0;EXPTHRESH=17	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:36:0.790985:23,23:22-24,22-24:9,20,0,6:22,2|23,7:6,1|13,1|16,1|18,1|19,1|22,1:277.297:366.612,131.36:0.578848,0.578848:0.0,0.0,1.0	0/0:56:0.998586:17,17:16-17,16-17:19,17,0,17:16,3|17,16:4,1|7,1|8,4|9,1|10,4|12,1|13,2|14,1|16,1|17,1:373.085:326.675,113.385:0.21692,0.21692:6.86508e-27,0.0012838,0.998723
-chr1	9993008	.	AAATAAATAAAT	.	.	.	END=9993019;RU=aaat;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:27:0.999925:3,3:3-3,3-3:17,10,0,0:3,17:NULL:156.012:366.612,131.36:0.0,0.0:0.0,4.21511e-05,0.999957	0/0:21:0.999304:3,3:3-3,3-3:14,7,0,0:3,14:NULL:122.489:326.675,113.385:0.0,0.0:0.0,0.00039125,0.999613
-chr1	9996407	.	AATAAATAAATA	.	.	.	END=9996418;RU=aata;PERIOD=4;REF=3.0;EXPTHRESH=3	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:33:1.00001:3,3:3-3,3-3:22,11,0,0:3,22:NULL:187.681:366.612,131.36:0.0,0.0:0.0,1.46403e-06,1.0	0/0:27:0.999931:3,3:3-3,3-3:17,10,0,0:3,17:NULL:153.515:326.675,113.385:0.0,0.0:0.0,4.14139e-05,0.999962
-chr1	9997562	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	CAAACAAACAAACAAACAAACAAACAAACAAA	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	1/1:39:0.931239:8,8:7-9,7-9:7,23,0,7:8,7:3,1|4,2|6,1|7,3:290.899:366.612,131.36:0.762826,0.762826:0.961227,0.0388423,1.67923e-15	.
-chr1	9997609	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	0/0:29:0.946889:8,8:6-8,6-8:8,20,0,0:8,8:NULL:217.425:366.612,131.36:0.996022,0.996022:5.08871e-18,0.0405452,0.959521	.
-chr2	2	.	CAAACAAACAAACAAACAAACAAACAAACAAACAAA	.	.	.	END=9997597;RU=caaa;PERIOD=4;REF=9.0;EXPTHRESH=9	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:37:0.99925:9,9:9-9,9-9:14,15,0,8:9,14:3,2|5,2|6,1|8,3:257.71:326.675,113.385:0.0,0.0:5.53904e-32,0.000440525,0.999561
-chr2	10	.	CACACACACACACACA	.	.	.	END=9997624;RU=ca;PERIOD=2;REF=8.0;EXPTHRESH=8	GT:DP:Q:REPCN:REPCI:RC:ENCLREADS:FLNKREADS:ML:INS:STDERR:QEXP	.	0/0:34:0.999453:8,8:7-9,7-9:15,15,0,2:8,15:4,1|7,1:216.15:326.675,113.385:0.370196,0.370196:1.5076e-32,0.000343545,0.999659
diff --git a/trtools/mergeSTR/tests/mydir/test_gangstr_outputcurrent b/trtools/mergeSTR/tests/mydir/test_gangstr_outputcurrent
deleted file mode 120000
index 21e4fbbe..00000000
--- a/trtools/mergeSTR/tests/mydir/test_gangstr_outputcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_gangstr_output0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0/test.vcf
deleted file mode 100644
index 99d731a1..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0/test.vcf
+++ /dev/null
@@ -1,126 +0,0 @@
-##fileformat=VCFv4.1
-##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
-##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
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-##contig=<ID=GL000221.1,length=155397>
-##contig=<ID=GL000209.1,length=159169>
-##contig=<ID=GL000218.1,length=161147>
-##contig=<ID=GL000220.1,length=161802>
-##contig=<ID=GL000213.1,length=164239>
-##contig=<ID=GL000211.1,length=166566>
-##contig=<ID=GL000199.1,length=169874>
-##contig=<ID=GL000217.1,length=172149>
-##contig=<ID=GL000216.1,length=172294>
-##contig=<ID=GL000215.1,length=172545>
-##contig=<ID=GL000205.1,length=174588>
-##contig=<ID=GL000219.1,length=179198>
-##contig=<ID=GL000224.1,length=179693>
-##contig=<ID=GL000223.1,length=180455>
-##contig=<ID=GL000195.1,length=182896>
-##contig=<ID=GL000212.1,length=186858>
-##contig=<ID=GL000222.1,length=186861>
-##contig=<ID=GL000200.1,length=187035>
-##contig=<ID=GL000193.1,length=189789>
-##contig=<ID=GL000194.1,length=191469>
-##contig=<ID=GL000225.1,length=211173>
-##contig=<ID=GL000192.1,length=547496>
-##contig=<ID=NC_007605,length=171823>
-##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
-##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
-##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
-##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
-##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
-##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
-##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
-##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
-##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
-##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
-##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
-##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
-##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
-##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
-##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
-##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
-##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
-##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
-##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
-##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
-##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
-##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
-##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
-##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
-##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
-##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	test_file_hipstr1:GTEX-R55C-0003	test_file_hipstr2:GTEX-R55C-0004
-1	16717	STR_2	GGTGGTGGTGGGGGCGGTGGGGGTGGTG	GGTGGTGGTGGGGGCGGTGGTGGTGCTG	.	.	START=16717;END=16744;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|0:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
diff --git a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0/test.vcf
deleted file mode 100644
index 1f49f4b3..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0/test.vcf
+++ /dev/null
@@ -1,3435 +0,0 @@
-##fileformat=VCFv4.1
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00674.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00405.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00418.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00423.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG005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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01551.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01363.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01352.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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elated/HG03164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03170.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03305.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03522.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02666.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02715.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03241.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02820.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02568.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02569.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02584.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02590.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02615.final.cram,/projects/ps-gymreklab/resources/d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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gym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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
-##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00674.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00405.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00418.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00423.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG005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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01551.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01363.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01352.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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elated/HG03164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03170.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03305.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03522.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02666.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02715.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03241.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02820.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02568.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02569.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02584.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02590.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02615.final.cram,/projects/ps-gymreklab/resources/d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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gym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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
-##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##source="beagle.22Jul22.46e.jar"
-##contig=<ID=chr1,length=248956422>
-##contig=<ID=chr2,length=242193529>
-##contig=<ID=chr3,length=198295559>
-##contig=<ID=chr4,length=190214555>
-##contig=<ID=chr5,length=181538259>
-##contig=<ID=chr6,length=170805979>
-##contig=<ID=chr7,length=159345973>
-##contig=<ID=chr8,length=145138636>
-##contig=<ID=chr9,length=138394717>
-##contig=<ID=chr10,length=133797422>
-##contig=<ID=chr11,length=135086622>
-##contig=<ID=chr12,length=133275309>
-##contig=<ID=chr13,length=114364328>
-##contig=<ID=chr14,length=107043718>
-##contig=<ID=chr15,length=101991189>
-##contig=<ID=chr16,length=90338345>
-##contig=<ID=chr17,length=83257441>
-##contig=<ID=chr18,length=80373285>
-##contig=<ID=chr19,length=58617616>
-##contig=<ID=chr20,length=64444167>
-##contig=<ID=chr21,length=46709983>
-##contig=<ID=chr22,length=50818468>
-##contig=<ID=chrX,length=156040895>
-##contig=<ID=chrY,length=57227415>
-##contig=<ID=chrM,length=16569>
-##contig=<ID=chr1_KI270706v1_random,length=175055>
-##contig=<ID=chr1_KI270707v1_random,length=32032>
-##contig=<ID=chr1_KI270708v1_random,length=127682>
-##contig=<ID=chr1_KI270709v1_random,length=66860>
-##contig=<ID=chr1_KI270710v1_random,length=40176>
-##contig=<ID=chr1_KI270711v1_random,length=42210>
-##contig=<ID=chr1_KI270712v1_random,length=176043>
-##contig=<ID=chr1_KI270713v1_random,length=40745>
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-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	hipstr_imputed_merge1:HG02256	hipstr_imputed_merge1:HG02257	hipstr_imputed_merge2:HG02258	hipstr_imputed_merge2:HG02280
-chr1	1007589	Human_STR_297	AAAAAGAAAAAGAAAAGAAAAAAGAAAAAG	AAAAAGAAAAAGAAAAGAAAAAAGAGAAAG	.	.	START=1007589;END=1007618;PERIOD=6	GT:AP1:AP2:DS	0|0:0.0:0.0:0.0	0|0:0.0:1.0:0.0	0|0:0.0:0.5:0.0	0|0:0.0:0.25:0.0
-chr1	1111533	Human_STR_383	CAACAACAACAACAA	CAACAACAA,CAACAACAACAA,CGACAACAACAACAA,CAACAACAACAACAACAA	.	.	START=1111533;END=1111547;PERIOD=3	GT:AP1:AP2:DS	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,1.0:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.25:0.0,0.0,0.0,0.0	0|0:0.0,0.0,0.0,0.0:0.0,0.0,0.0,0.5:0.0,0.0,0.0,0.0
diff --git a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_APcurrent b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_APcurrent
deleted file mode 120000
index 65700fbf..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_APcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile_AP0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFilecurrent b/trtools/mergeSTR/tests/mydir/test_hipSTRRightFilecurrent
deleted file mode 120000
index 5e255919..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipSTRRightFilecurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipSTRRightFile0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipstr_output0/test.vcf
deleted file mode 100644
index e7228875..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipstr_output0/test.vcf
+++ /dev/null
@@ -1,126 +0,0 @@
-##fileformat=VCFv4.1
-##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
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-##contig=<ID=GL000248.1,length=39786>
-##contig=<ID=GL000244.1,length=39929>
-##contig=<ID=GL000238.1,length=39939>
-##contig=<ID=GL000202.1,length=40103>
-##contig=<ID=GL000234.1,length=40531>
-##contig=<ID=GL000232.1,length=40652>
-##contig=<ID=GL000206.1,length=41001>
-##contig=<ID=GL000240.1,length=41933>
-##contig=<ID=GL000236.1,length=41934>
-##contig=<ID=GL000241.1,length=42152>
-##contig=<ID=GL000243.1,length=43341>
-##contig=<ID=GL000242.1,length=43523>
-##contig=<ID=GL000230.1,length=43691>
-##contig=<ID=GL000237.1,length=45867>
-##contig=<ID=GL000233.1,length=45941>
-##contig=<ID=GL000204.1,length=81310>
-##contig=<ID=GL000198.1,length=90085>
-##contig=<ID=GL000208.1,length=92689>
-##contig=<ID=GL000191.1,length=106433>
-##contig=<ID=GL000227.1,length=128374>
-##contig=<ID=GL000228.1,length=129120>
-##contig=<ID=GL000214.1,length=137718>
-##contig=<ID=GL000221.1,length=155397>
-##contig=<ID=GL000209.1,length=159169>
-##contig=<ID=GL000218.1,length=161147>
-##contig=<ID=GL000220.1,length=161802>
-##contig=<ID=GL000213.1,length=164239>
-##contig=<ID=GL000211.1,length=166566>
-##contig=<ID=GL000199.1,length=169874>
-##contig=<ID=GL000217.1,length=172149>
-##contig=<ID=GL000216.1,length=172294>
-##contig=<ID=GL000215.1,length=172545>
-##contig=<ID=GL000205.1,length=174588>
-##contig=<ID=GL000219.1,length=179198>
-##contig=<ID=GL000224.1,length=179693>
-##contig=<ID=GL000223.1,length=180455>
-##contig=<ID=GL000195.1,length=182896>
-##contig=<ID=GL000212.1,length=186858>
-##contig=<ID=GL000222.1,length=186861>
-##contig=<ID=GL000200.1,length=187035>
-##contig=<ID=GL000193.1,length=189789>
-##contig=<ID=GL000194.1,length=191469>
-##contig=<ID=GL000225.1,length=211173>
-##contig=<ID=GL000192.1,length=547496>
-##contig=<ID=NC_007605,length=171823>
-##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
-##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
-##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
-##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
-##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
-##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
-##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
-##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
-##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
-##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
-##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
-##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
-##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
-##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
-##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
-##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
-##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
-##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
-##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
-##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
-##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
-##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
-##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
-##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
-##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
-##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	GTEX-R55C-0003	GTEX-R55C-0004
-1	16717	STR_2	GGTGGTGGTGGGGGCGGTGGGGGTGGTG	GGTGGTGGTGGGGGCGGTGGTGGTGCTG	.	.	START=16717;END=16744;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|0:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0/test.vcf
deleted file mode 100644
index f23c1632..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0/test.vcf
+++ /dev/null
@@ -1,3435 +0,0 @@
-##fileformat=VCFv4.1
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00674.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00405.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00418.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00423.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG005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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01551.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01363.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01352.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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elated/HG03164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03170.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03305.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03522.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02666.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02715.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03241.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02820.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02568.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02569.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02584.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02590.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02615.final.cram,/projects/ps-gymreklab/resources/d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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gym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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
-##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01883.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01958.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02053.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01880.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02013.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02322.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02481.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02554.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02580.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02451.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ACB/splits/00/running_out/ACB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19712.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20289.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20294.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20359.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20412.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA20358.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ASW/splits/00/running_out/ASW_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03824.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03823.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03833.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03607.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04162.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04194.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04195.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03825.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03834.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03929.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04193.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/BEB/splits/00/running_out/BEB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02165.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02166.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02396.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02389.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02392.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02398.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02402.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02406.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02407.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02410.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CDX/splits/00/running_out/CDX_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07051.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA10851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11931.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12044.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12156.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12414.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA06989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12283.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12340.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12400.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12413.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12829.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA07048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA11933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA12546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA06997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07034.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA07435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10830.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10831.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10835.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA10865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA11993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12386.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12739.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12832.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA12892.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/CEU/splits/00/running_out/CEU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18526.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18537.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18545.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18552.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18555.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18564.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18592.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18608.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18609.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18638.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18546.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18549.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18606.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18615.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18616.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18617.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18618.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18627.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18630.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18633.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18637.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18639.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18641.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18647.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18553.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18560.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18591.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18648.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHB/splits/00/running_out/CHB_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00626.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00704.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00707.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00409.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00622.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00632.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00674.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00405.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00408.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00418.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00420.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00423.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00427.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00450.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00477.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG00501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG005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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/CHS/splits/00/running_out/CHS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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s/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01550.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01551.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01363.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01444.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01447.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01459.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01352.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01496.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01552.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/CLM/splits/00/running_out/CLM_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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elated/HG03164.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03170.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03296.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03305.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03522.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/ESN/splits/00/running_out/ESN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00179.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00180.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00181.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00182.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00183.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00187.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00188.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00267.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00268.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00269.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00306.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00311.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00313.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00335.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00336.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00337.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00339.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00342.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00343.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00344.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00349.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00353.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00356.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00357.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00358.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00361.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00362.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00364.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00365.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00366.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00367.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00368.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00369.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00371.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00373.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00381.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00276.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00280.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00281.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00282.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00284.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00325.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00326.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00329.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00330.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00341.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00288.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00290.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00304.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/FIN/splits/00/running_out/FIN_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00155.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00157.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00158.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00233.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00255.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00231.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00232.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00242.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00244.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00245.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00254.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00263.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00264.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00250.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG00251.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02215.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/GBR/splits/00/running_out/GBR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20889.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20901.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20902.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20903.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20904.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21110.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21111.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21112.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21125.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20905.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21124.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA21129.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/GIH/splits/00/running_out/GIH_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02465.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02561.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02562.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02570.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02594.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02613.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02614.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02620.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02621.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02623.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02628.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02666.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02610.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02611.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02635.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02715.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02839.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03045.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03046.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03258.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02816.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02817.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02891.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03241.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03246.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02820.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02568.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02569.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02584.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02590.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02612.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02615.final.cram,/projects/ps-gymreklab/resources/d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1000Genomes/additional_698_related/HG03540.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/GWD/splits/00/running_out/GWD_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/IBS/splits/00/running_out/IBS_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03713.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03714.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03882.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03742.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04014.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04216.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04219.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04217.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/ITU/splits/00/running_out/ITU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18956.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18959.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18960.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18964.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19005.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18957.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18962.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18963.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18966.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18987.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18994.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19000.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19001.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19007.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19009.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19010.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19012.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19062.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18988.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19011.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19091.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/JPT/splits/00/running_out/JPT_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02070.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02076.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02134.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02133.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01841.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01595.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01596.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01598.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01599.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01840.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01842.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01843.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01845.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01847.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01866.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02048.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02049.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02087.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02032.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02050.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02040.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02067.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02136.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02059.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02068.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02071.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02080.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02083.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02126.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02135.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02526.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EAS/KHV/splits/00/running_out/KHV_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19020.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19023.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19024.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19025.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19026.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19027.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19028.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19030.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19031.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19037.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19041.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19043.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19307.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19308.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19309.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19310.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19314.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19315.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19316.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19317.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19318.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19319.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19320.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19321.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19323.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19324.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19327.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19328.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19331.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19332.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19334.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19338.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19346.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19347.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19350.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19351.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19355.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19360.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19372.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19374.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19375.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19377.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19379.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19383.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19384.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19390.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19393.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19395.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19399.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19403.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19404.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19429.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19430.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19431.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19434.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19435.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19440.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19443.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19448.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19462.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19463.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19466.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19467.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19468.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19471.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19474.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19475.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/LWK/splits/00/running_out/LWK_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03052.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03057.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03058.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03078.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03084.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03085.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03397.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03451.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03452.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03464.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03469.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03472.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03470.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03473.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03081.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03088.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03212.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03055.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03376.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03380.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03385.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03388.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03401.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03419.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03061.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03428.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03433.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03439.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03442.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03445.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03446.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03460.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03461.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03478.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03479.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03066.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03069.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03072.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03410.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03436.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03437.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03449.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03458.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03476.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03547.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03548.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03556.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03557.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03391.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03455.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03559.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03563.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03575.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03054.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03060.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03063.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03064.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03073.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03074.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03077.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03079.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03082.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03086.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03378.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03382.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03394.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03432.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03457.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03558.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03056.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03065.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03438.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03453.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03454.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03456.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03480.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03574.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03576.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03584.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/MSL/splits/00/running_out/MSL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19664.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19669.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19670.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19676.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19678.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19716.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19717.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19719.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19720.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19722.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19723.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19732.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19747.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19749.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19777.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19779.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19782.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19665.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19671.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19675.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19677.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19718.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19721.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19730.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19748.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19751.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19781.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19796.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/MXL/splits/00/running_out/MXL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01565.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01566.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01571.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01572.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01577.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01578.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01918.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01892.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01893.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01920.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01921.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01926.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01927.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01932.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01936.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01938.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01939.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01941.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01942.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01948.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01954.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01967.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01968.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01970.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01971.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01974.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01973.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01977.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01976.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01979.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01980.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02008.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01997.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02002.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02090.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02089.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02104.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02105.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02285.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02286.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02301.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01982.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02259.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02260.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02271.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02272.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02277.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02278.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02291.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02292.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02299.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02298.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01961.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01965.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02252.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02253.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02262.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02265.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02266.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02274.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02275.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02304.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02312.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02345.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02348.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02425.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01567.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01573.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01579.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01919.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01922.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01928.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01937.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01940.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01946.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01952.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01969.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01972.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01975.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01978.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01981.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01983.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01984.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01993.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02004.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02091.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02261.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02273.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02279.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02287.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02293.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02300.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02302.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02303.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PEL/splits/00/running_out/PEL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02600.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02601.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02603.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02604.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02654.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02655.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02657.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02658.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02661.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02734.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02724.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02725.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02727.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02728.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02784.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02789.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03234.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03490.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03491.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03619.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03634.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03667.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03668.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03015.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03016.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03702.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03703.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03708.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03709.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02493.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02494.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02648.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02651.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02699.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02700.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02737.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02793.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03228.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03624.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03625.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03640.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03649.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03652.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03705.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03706.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01593.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02597.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03021.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03636.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01583.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG01589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02731.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG02780.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03018.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03019.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03022.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03629.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03631.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03660.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03663.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02492.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02495.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02602.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02605.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02650.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02653.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02656.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02659.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02662.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02701.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02726.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02729.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02735.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02776.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02788.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02791.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG02794.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03017.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03230.final.cram,/projects/ps-gym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--fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/PJL/splits/00/running_out/PJL_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams 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_698_related/HG01099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01169.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01178.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01192.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01243.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG01249.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AMR/PUR/splits/00/running_out/PUR_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03644.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03643.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03679.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03642.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03673.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03684.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03885.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03886.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03692.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03693.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03740.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03741.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03884.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03743.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03746.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03888.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03750.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03844.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04006.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03838.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03849.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03950.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03887.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03986.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03896.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03898.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03900.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03943.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03850.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03894.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03897.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03944.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03646.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03645.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03999.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03672.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03680.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03681.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03685.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03686.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03687.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03689.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03690.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03691.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03694.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03695.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03696.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03697.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03698.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03711.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03733.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03736.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03738.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03744.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03745.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03836.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03837.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03846.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03848.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03851.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03895.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03890.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04033.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03947.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03953.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03949.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04035.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04029.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04042.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03995.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03899.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03951.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04075.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04229.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04227.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03945.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03955.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03990.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03991.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03985.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03989.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG03998.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04003.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04038.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04039.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04047.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/HG04106.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03682.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03683.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03688.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG03992.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04036.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/HG04228.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//SAS/STU/splits/00/running_out/STU_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20509.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20512.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20513.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20514.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20524.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20525.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20527.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20528.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20529.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20530.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20531.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20532.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20533.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20534.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20535.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20536.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20538.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20539.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20540.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20541.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20542.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20543.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20544.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20581.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20582.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20585.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20586.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20587.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20588.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20589.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20752.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20753.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20754.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20755.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20756.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20757.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20758.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20759.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20760.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20761.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20762.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20763.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20764.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20765.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20766.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20767.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20768.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20769.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20770.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20771.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20772.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20773.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20774.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20775.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20778.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20783.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20785.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20786.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20787.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20790.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20792.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20795.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20796.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20797.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20798.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20799.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20800.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20801.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20802.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20803.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20804.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20805.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20806.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20807.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20808.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20809.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20810.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20811.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20812.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20813.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20814.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20815.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20818.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20819.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20821.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20822.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20826.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20827.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20828.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA20832.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//EUR/TSI/splits/00/running_out/TSI_00.vcf.gz --max-reads 2000000
-##command=HipSTR-v0.6.2 --bams /projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18486.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18489.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18498.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18499.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18501.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18502.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18504.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18505.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18507.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18508.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18510.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18511.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18516.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18517.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18519.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18520.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18522.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18523.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18853.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18856.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18858.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18861.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18870.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18871.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18907.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18909.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18912.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18916.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19093.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19098.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19099.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19102.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19108.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19114.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19116.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19119.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19129.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19131.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19137.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19138.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19141.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19143.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19144.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19147.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19152.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19153.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19159.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19160.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19171.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19172.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19190.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19200.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19201.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19204.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19206.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19207.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19209.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19210.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19225.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19238.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19239.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19257.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18488.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18867.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18868.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18873.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18908.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18910.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18917.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18923.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18924.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18933.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18934.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19092.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19095.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19096.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19107.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19113.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19117.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19118.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19121.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19130.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19146.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19149.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19175.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19184.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19185.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19189.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19197.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19198.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19213.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19214.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19223.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19235.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19236.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19247.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19248.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19256.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18864.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18865.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18876.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18877.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18878.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18879.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18881.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18915.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA19222.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/cram/NA18874.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18484.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18485.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18487.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18497.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18500.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18503.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18506.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18515.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18518.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18521.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18852.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18854.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18855.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18857.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18859.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18860.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18862.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18863.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18869.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18872.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18875.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18906.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18911.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18913.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18914.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18925.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18930.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA18935.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19094.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19097.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19100.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19101.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19103.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19109.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19115.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19120.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19122.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19123.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19127.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19128.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19132.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19139.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19140.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19142.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19145.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19148.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19150.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19151.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19154.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19161.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19173.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19174.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19176.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19177.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19186.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19191.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19199.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19202.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19203.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19205.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19208.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19211.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19215.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19221.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19224.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19226.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19237.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19240.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19249.final.cram,/projects/ps-gymreklab/resources/datasets/1000Genomes/additional_698_related/NA19258.final.cram --fasta /projects/ps-gymreklab/resources/dbase/human/hg38_full_plus_hla/GRCh38_full_analysis_set_plus_decoy_hla.fa --regions /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/regions/00.txt --str-vcf /projects/ps-gymreklab/mousavi/results/1000genomes/hipstr_outs//AFR/YRI/splits/00/running_out/YRI_00.vcf.gz --max-reads 2000000
-##command=/projects/ps-gymreklab/helia/ensembl/venv_3.9/bin/mergeSTR --vcfs /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ACB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ASW_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/BEB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CDX_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CEU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHB_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CHS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/CLM_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ESN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/FIN_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GBR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GIH_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/GWD_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/IBS_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/ITU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/JPT_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/KHV_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/LWK_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MSL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/MXL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PEL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PJL_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/PUR_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/STU_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/TSI_filtered.vcf.gz,/projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/filtered/YRI_filtered.vcf.gz --out /projects/ps-gymreklab/helia/ensembl/1000G_calls/hipstr/all_pop_filtered_hipstr --vcftype hipstr
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##source="beagle.22Jul22.46e.jar"
-##contig=<ID=chr1,length=248956422>
-##contig=<ID=chr2,length=242193529>
-##contig=<ID=chr3,length=198295559>
-##contig=<ID=chr4,length=190214555>
-##contig=<ID=chr5,length=181538259>
-##contig=<ID=chr6,length=170805979>
-##contig=<ID=chr7,length=159345973>
-##contig=<ID=chr8,length=145138636>
-##contig=<ID=chr9,length=138394717>
-##contig=<ID=chr10,length=133797422>
-##contig=<ID=chr11,length=135086622>
-##contig=<ID=chr12,length=133275309>
-##contig=<ID=chr13,length=114364328>
-##contig=<ID=chr14,length=107043718>
-##contig=<ID=chr15,length=101991189>
-##contig=<ID=chr16,length=90338345>
-##contig=<ID=chr17,length=83257441>
-##contig=<ID=chr18,length=80373285>
-##contig=<ID=chr19,length=58617616>
-##contig=<ID=chr20,length=64444167>
-##contig=<ID=chr21,length=46709983>
-##contig=<ID=chr22,length=50818468>
-##contig=<ID=chrX,length=156040895>
-##contig=<ID=chrY,length=57227415>
-##contig=<ID=chrM,length=16569>
-##contig=<ID=chr1_KI270706v1_random,length=175055>
-##contig=<ID=chr1_KI270707v1_random,length=32032>
-##contig=<ID=chr1_KI270708v1_random,length=127682>
-##contig=<ID=chr1_KI270709v1_random,length=66860>
-##contig=<ID=chr1_KI270710v1_random,length=40176>
-##contig=<ID=chr1_KI270711v1_random,length=42210>
-##contig=<ID=chr1_KI270712v1_random,length=176043>
-##contig=<ID=chr1_KI270713v1_random,length=40745>
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diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output_APcurrent b/trtools/mergeSTR/tests/mydir/test_hipstr_output_APcurrent
deleted file mode 120000
index 938a1821..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipstr_output_APcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipstr_output_AP0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0/test.vcf b/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0/test.vcf
deleted file mode 100644
index 36adfa23..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0/test.vcf
+++ /dev/null
@@ -1,128 +0,0 @@
-##fileformat=VCFv4.1
-##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
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-##contig=<ID=GL000240.1,length=41933>
-##contig=<ID=GL000236.1,length=41934>
-##contig=<ID=GL000241.1,length=42152>
-##contig=<ID=GL000243.1,length=43341>
-##contig=<ID=GL000242.1,length=43523>
-##contig=<ID=GL000230.1,length=43691>
-##contig=<ID=GL000237.1,length=45867>
-##contig=<ID=GL000233.1,length=45941>
-##contig=<ID=GL000204.1,length=81310>
-##contig=<ID=GL000198.1,length=90085>
-##contig=<ID=GL000208.1,length=92689>
-##contig=<ID=GL000191.1,length=106433>
-##contig=<ID=GL000227.1,length=128374>
-##contig=<ID=GL000228.1,length=129120>
-##contig=<ID=GL000214.1,length=137718>
-##contig=<ID=GL000221.1,length=155397>
-##contig=<ID=GL000209.1,length=159169>
-##contig=<ID=GL000218.1,length=161147>
-##contig=<ID=GL000220.1,length=161802>
-##contig=<ID=GL000213.1,length=164239>
-##contig=<ID=GL000211.1,length=166566>
-##contig=<ID=GL000199.1,length=169874>
-##contig=<ID=GL000217.1,length=172149>
-##contig=<ID=GL000216.1,length=172294>
-##contig=<ID=GL000215.1,length=172545>
-##contig=<ID=GL000205.1,length=174588>
-##contig=<ID=GL000219.1,length=179198>
-##contig=<ID=GL000224.1,length=179693>
-##contig=<ID=GL000223.1,length=180455>
-##contig=<ID=GL000195.1,length=182896>
-##contig=<ID=GL000212.1,length=186858>
-##contig=<ID=GL000222.1,length=186861>
-##contig=<ID=GL000200.1,length=187035>
-##contig=<ID=GL000193.1,length=189789>
-##contig=<ID=GL000194.1,length=191469>
-##contig=<ID=GL000225.1,length=211173>
-##contig=<ID=GL000192.1,length=547496>
-##contig=<ID=NC_007605,length=171823>
-##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
-##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
-##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
-##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
-##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
-##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
-##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
-##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
-##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
-##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
-##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
-##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
-##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
-##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
-##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
-##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
-##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
-##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
-##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
-##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
-##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
-##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
-##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
-##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
-##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
-##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
-##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
-##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
-##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
-##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
-##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	GTEX-R55C-0004	GTEX-R55C-0003
-1	16717	STR_2	GGTGGTGGTGGGGGCGGTGGGGGTGGTG	GGTGGTGGTGGGGGCGGTGGTGGTGCTG	.	.	START=16717;END=16744;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
-1	16914	STR_3	CTTCTT	CTTCTTCTT	.	.	START=16914;END=16919;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
-1	19924	STR_4	ATATAT	ATATATAT,ATATATGTAT	.	.	START=19924;END=19929;PERIOD=2	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|2:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pbcurrent b/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pbcurrent
deleted file mode 120000
index 058e7018..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pbcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipstr_output_flanking_pb0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_hipstr_outputcurrent b/trtools/mergeSTR/tests/mydir/test_hipstr_outputcurrent
deleted file mode 120000
index b9982e6b..00000000
--- a/trtools/mergeSTR/tests/mydir/test_hipstr_outputcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_hipstr_output0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_multiple_vcf_typescurrent b/trtools/mergeSTR/tests/mydir/test_multiple_vcf_typescurrent
deleted file mode 120000
index 9f822a57..00000000
--- a/trtools/mergeSTR/tests/mydir/test_multiple_vcf_typescurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_multiple_vcf_types0
\ No newline at end of file
diff --git a/trtools/mergeSTR/tests/mydir/test_popstr_output0/test.vcf b/trtools/mergeSTR/tests/mydir/test_popstr_output0/test.vcf
deleted file mode 100644
index 19268514..00000000
--- a/trtools/mergeSTR/tests/mydir/test_popstr_output0/test.vcf
+++ /dev/null
@@ -1,8009 +0,0 @@
-##fileformat=VCFv4.1
-##command=/home/vscode/.cache/pypoetry/virtualenvs/trtools-6-29ywz1-py3.8/bin/pytest --basetemp=mydir
-##source=PopSTR
-##contig=<ID=chr21,length=46709983>
-##INFO=<ID=Motif,Number=1,Type=String,Description="Microsatellite repeat motif">
-##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
-##FORMAT=<ID=AD,Number=R,Type=Integer,Description="Allelic depths for the ref and alt alleles in the order listed">
-##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Approximate read depth">
-##FORMAT=<ID=PL,Number=G,Type=Integer,Description="PHRED-scaled genotype likelihoods">
-#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	NA12878	NA12891	NA12892
-chr21	5020351	chr21:5020351:M	GGGGGGGCGGGGGGGGGG	<14>,<17>	.	.	Motif=G	GT:AD:DP:PL	0/2:5,0,11:17:152,197,255,0,90,44	1/2:1,11,6:18:255,84,131,255,0,255	0/0:14,0,0:15:0,44,255,44,255,255
-chr21	5024618	chr21:5024618:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:57,0,3	0/1:5,5:11:61,0,53	0/0:11,1:13:0,12,166
-chr21	5031126	chr21:5031126:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:51,9,0	1/1:0,4:4:66,12,0	0/0:3,0:3:0,9,50
-chr21	5040718	chr21:5040718:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,24:35:255,0,105	0/1:12,13:25:160,0,141	0/0:18,0:19:0,56,255
-chr21	5042862	chr21:5042862:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:116,0,106	0/1:11,6:17:56,0,145	0/0:14,0:16:0,46,255
-chr21	5051279	chr21:5051279:M	TCACTCACTCATTCATCCCACATTCACTCACTCA	<1.8>	.	.	Motif=TCAC	GT:AD:DP:PL	0/1:8,3:11:43,0,165	0/1:4,7:11:142,0,66	0/1:5,7:13:147,0,85
-chr21	5051299	chr21:5051299:M	CATTCACTCACTCATTCATTCATCCCACATTCACTCATTCATTCAT	<4.8>	.	.	Motif=CATT	GT:AD:DP:PL	0/0:2,0:2:0,6,52	0/1:6,3:9:76,0,130	0/1:3,1:4:22,0,67
-chr21	5058258	chr21:5058258:M	TTTTTTTGTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:86,0,12	0/1:6,6:12:68,0,69	0/0:5,0:5:0,15,89
-chr21	5067052	chr21:5067052:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:163,18,0	0/1:8,5:13:99,0,175	0/1:1,1:2:21,0,20
-chr21	5103483	chr21:5103483:M	AAAAAAAAAAAAAAAAAGAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:10:0,29,166	0/0:8,2:12:0,1,119	0/1:4,13:17:174,0,19
-chr21	5103759	chr21:5103759:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<24.5>,<25.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,11,5,0:17:255,68,36,141,0,152,255,72,198,255	2/3:0,1,5,3:9:207,144,125,47,33,23,82,52,0,67	1/1:2,12,0,0:14:169,7,0,175,41,227,208,42,255,255
-chr21	5124343	chr21:5124343:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:8:84,0,12	0/1:8,3:11:19,0,104	0/1:7,2:11:6,0,104
-chr21	5224724	chr21:5224724:M	AAACAAACAAA	<2.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:180,60:256:61,0,255	0/1:172,46:242:27,0,255	0/1:156,91:272:255,0,255
-chr21	5229746	chr21:5229746:M	TTGTTGTTGTTGTT	<4.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:64,30:101:0,1,130	0/1:34,37:82:82,0,20	0/0:59,12:80:0,28,167
-chr21	5230609	chr21:5230609:M	ACACACACACACACACACACACACACACACACAC	<15>,<20>,<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/2:15,0,14,5,7:45:255,255,255,0,190,200,26,236,139,255,100,255,131,255,255	1/4:6,9,0,2,12:30:255,255,255,255,255,255,111,72,255,255,39,0,244,242,223	0/3:27,0,13,17,7:67:255,255,255,152,255,255,0,255,255,255,142,255,255,255,255
-chr21	5230670	chr21:5230670:M	AAAAAAGAAAAAACAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:79,43:122:255,0,255	0/1:72,45:117:255,0,255	0/1:99,20:119:192,0,255
-chr21	5240627	chr21:5240627:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:13,21,20:63:255,32,137,136,0,102	1/2:6,11,26:52:255,124,153,110,0,39	1/2:13,26,35:77:255,128,231,140,0,66
-chr21	5242046	chr21:5242046:M	TCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCT	<12.5>,<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:1,33,6:45:255,44,50,255,0,255	1/2:0,16,11:33:255,95,225,255,0,255	1/2:3,31,7:66:255,19,81,255,0,255
-chr21	5242078	chr21:5242078:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,12:39:77,0,170	1/1:2,10:22:115,4,0	0/1:24,15:56:110,0,240
-chr21	5245137	chr21:5245137:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGT	<14>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,28:82:255,0,255	0/1:19,28:77:255,0,237	0/1:12,44:94:255,0,255
-chr21	5247825	chr21:5247825:M	TTTATTTATTT	<2.5>,<3.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:1,28,9:45:124,41,19,144,0,255	1/2:0,39,16:57:198,101,81,183,0,255	1/2:0,29,15:48:170,101,98,138,0,255
-chr21	5247833	chr21:5247833:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:11,57:76:255,86,0	1/1:7,35:52:255,65,0	1/1:8,80:90:255,154,0
-chr21	5260390	chr21:5260390:M	ATATATATATATATAT	<7>,<9>	.	.	Motif=AT	GT:AD:DP:PL	1/2:5,15,15:36:255,197,255,188,0,255	0/2:4,0,8:12:101,135,255,0,57,33	0/1:23,12,0:35:108,0,255,208,255,255
-chr21	5261573	chr21:5261573:M	TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTT	<16.5>,<17.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/2:0,0,5:16:67,22,68,0,11,16	1/1:0,0,0:5:0,0,0,0,0,0	1/2:0,9,2:30:211,4,92,48,0,46
-chr21	5296708	chr21:5296708:M	ATAATAATAATAATAATAA	<4.7>,<5.3>	.	.	Motif=ATA	GT:AD:DP:PL	1/2:0,4,20:24:255,255,255,84,0,16	1/1:0,4,0:4:116,12,0,96,12,87	2/2:0,3,43:46:255,255,255,134,72,0
-chr21	5327591	chr21:5327591:M	AGTGGAGTGGAGTGGAGTGGAGTTGATCAGAGTGCAGTGGAATTGAATGGAATGGACTGGAATGGAATAGAGTGGAGTGGAGGGGAGTGG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	1/1:0,3:3:36,8,0	0/1:1,3:4:25,0,14	1/1:1,9:10:83,2,0
-chr21	5329879	chr21:5329879:M	GAATGGAATGGAATGGAGTGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	1/1:0,101:101:255,255,0	1/1:0,89:89:255,247,0	1/1:1,106:107:255,255,0
-chr21	5329940	chr21:5329940:M	AATGGAGTGGAATGGAAT	<27>	.	.	Motif=AATGG	GT:AD:DP:PL	0/1:17,101:118:255,0,130	0/1:17,89:106:255,0,167	0/1:17,105:122:255,0,119
-chr21	5329969	chr21:5329969:M	GAGTGGACTGGAGTGGAGTGGAGTTTAGTGGAGTG	<27>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:13,20:33:153,0,247	0/1:4,19:23:169,0,40	0/1:14,26:40:208,0,254
-chr21	5334486	chr21:5334486:M	TTTTTTTTTGTTTGTTTGTTTGTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	.	0/0:1,0:1:0,3,18	1/1:0,17:17:255,50,0
-chr21	5370146	chr21:5370146:M	AAATAATAAATAAATAAATAAATAAA	<7.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:8,1:12:0,19,139	0/1:0,3:6:26,0,20	0/0:9,0:9:0,26,130
-chr21	5448587	chr21:5448587:M	TTTTTTTTTTTTT	<12>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,5,8:24:159,138,224,0,63,255	0/1:17,13,3:33:78,0,129,94,142,255	1/2:9,13,7:29:160,58,111,50,0,255
-chr21	5505757	chr21:5505757:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,2:11:3,0,125	0/1:14,4:18:15,0,181	1/1:0,4:4:69,12,0
-chr21	5511978	chr21:5511978:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,1,3:7:132,92,101,46,0,32	1/2:1,3,1:7:106,33,63,60,0,69	1/2:0,0,5:8:144,124,143,32,0,14
-chr21	5515734	chr21:5515734:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,17:24:248,2,0	0/1:10,8:19:83,0,106	1/1:0,21:22:255,64,0
-chr21	5520202	chr21:5520202:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:2,1:3:2,0,12	0/1:6,3:11:1,0,46	.
-chr21	5520833	chr21:5520833:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,4,0:7:47,8,0,67,20,153	1/2:2,3,4:10:57,51,78,10,0,69	1/1:0,5,0:6:47,13,0,62,15,133
-chr21	5534983	chr21:5534983:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,1:1:5,2,0	0/0:5,2:7:0,3,14	1/1:0,3:3:14,5,0
-chr21	5535008	chr21:5535008:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:87,9,0	0/1:5,4:9:87,0,119	0/1:1,1:3:32,0,21
-chr21	5536014	chr21:5536014:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11:12:220,33,0	1/1:0,9:11:178,27,0	1/1:0,28:29:255,86,0
-chr21	5550856	chr21:5550856:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:6:68,1,0	0/0:5,0:5:0,15,81	0/0:1,0:1:0,3,17
-chr21	5552200	chr21:5552200:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,18:20:255,20,0	0/1:2,2:5:29,0,36	1/1:0,24:25:255,57,0
-chr21	5552591	chr21:5552591:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,3:4:35,8,0	1/1:0,5:7:58,14,0	1/1:0,5:6:58,14,0
-chr21	5555313	chr21:5555313:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:6,11,13:34:130,5,112,9,0,12	0/1:20,7,3:32:32,0,255,27,153,136	0/1:3,17,3:29:210,0,72,114,44,119
-chr21	5557399	chr21:5557399:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:16:158,0,108	0/1:4,6:10:119,0,72	1/1:1,10:12:240,11,0
-chr21	5557715	chr21:5557715:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:21:78,0,255	0/0:14,1:15:0,18,255	0/1:7,6:15:131,0,151
-chr21	5562461	chr21:5562461:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:162,0,96	1/1:1,10:14:218,12,0	0/1:2,10:12:196,0,11
-chr21	5563477	chr21:5563477:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:13,4:18:64,0,255	0/1:13,3:16:31,0,255	0/1:7,6:15:107,0,154
-chr21	5563948	chr21:5563948:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:5:38,0,65	0/1:2,1:6:81,0,49	0/1:2,3:6:91,0,38
-chr21	5564112	chr21:5564112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,10:21:93,0,108	0/1:13,6:20:43,0,135	1/1:3,15:19:191,9,0
-chr21	5580885	chr21:5580885:M	TCTCTCTCTTTCTTTCTTTCCTTCTCTCTCTCT	<4.5>,<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/2:5,0,3:8:57,35,159,0,132,124	0/2:13,1,3:17:83,23,255,0,255,255	1/1:0,4,1:5:215,15,0,51,2,36
-chr21	5582877	chr21:5582877:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,3:3:88,9,0	0/1:0,3:5:74,0,4	1/1:0,1:1:30,3,0
-chr21	5589529	chr21:5589529:M	AAAAGAAAAACAAAAA	<2.8>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:19,0:19:0,53,252	0/1:16,8:24:39,0,145	0/0:15,2:17:0,21,172
-chr21	5592304	chr21:5592304:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:18:38,0,58	0/0:7,0:13:0,26,145	0/1:0,6:10:73,0,17
-chr21	5598766	chr21:5598766:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,12:33:81,0,197	0/0:26,5:31:0,18,255	0/1:21,14:39:90,0,234
-chr21	5613671	chr21:5613671:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	0/1:2,6:19:81,0,11	0/1:4,6:14:73,0,9	1/1:0,10:16:96,1,0
-chr21	5614254	chr21:5614254:M	AGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:13,3:16:27,0,255	0/0:15,0:16:0,31,255	0/1:6,3:10:46,0,126
-chr21	5624629	chr21:5624629:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,9:17:200,0,52	0/1:4,5:13:140,0,43	0/1:6,14:20:234,0,63
-chr21	5625184	chr21:5625184:M	ATTTATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:21,1:22:0,47,194	0/0:21,6:27:0,12,143	0/1:17,9:26:20,0,97
-chr21	5687702	chr21:5687702:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,13:30:255,0,118	0/1:11,15:27:252,0,144	0/1:9,9:18:140,0,132
-chr21	5688257	chr21:5688257:M	ATTTATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:16,5:21:0,6,106	0/0:17,5:22:0,9,114	0/1:20,8:28:5,0,120
-chr21	5693908	chr21:5693908:M	ATTTATTTATTT	<2.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:7,7:16:31,0,16	0/1:7,8:16:31,0,16	1/1:1,11:12:76,20,0
-chr21	5698851	chr21:5698851:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:41:0,66,255	0/1:16,7:27:25,0,128	0/0:30,10:47:0,5,255
-chr21	5711871	chr21:5711871:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,4:4:124,12,0	1/1:0,4:4:119,12,0	1/1:0,4:4:123,12,0
-chr21	5717129	chr21:5717129:M	TTTTTTTTTTTTTTTTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,0,1:4:27,0,20,6,0,22	1/2:0,1,3:5:102,66,65,37,0,27	1/2:0,5,2:9:187,47,30,134,0,125
-chr21	5738430	chr21:5738430:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,2:9:0,4,36	0/0:8,0:13:0,28,96	1/1:0,4:7:41,12,0
-chr21	5745954	chr21:5745954:M	CACACACACACACACACACACACACAC	<14.5>,<15.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:19,2,0:21:0,34,207,57,255,255	0/0:15,4,0:19:0,4,131,45,182,255	1/2:2,5,3:10:77,12,9,24,0,55
-chr21	5757052	chr21:5757052:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,5:25:0,11,166	0/1:7,12:22:73,0,48	0/1:16,7:23:16,0,115
-chr21	5758152	chr21:5758152:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/1:31,10:41:28,0,255	0/0:34,1:35:0,85,255	0/1:31,11:42:37,0,255
-chr21	5762970	chr21:5762970:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,6:18:19,0,86	0/0:19,1:20:0,43,199	0/1:22,8:30:9,0,165
-chr21	5772988	chr21:5772988:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:2,8:11:82,1,0	1/1:3,12:15:119,2,0	1/1:0,17:17:229,48,0
-chr21	5774011	chr21:5774011:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:127,0,91	0/1:8,12:20:147,0,78	0/1:6,15:21:203,0,44
-chr21	5784132	chr21:5784132:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:7:7,0,36	0/0:6,0:7:0,8,63	0/1:6,3:9:13,0,51
-chr21	5790769	chr21:5790769:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,68,255	0/1:9,5:14:42,0,109	0/0:23,2:25:0,39,255
-chr21	5794367	chr21:5794367:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,13:45:80,0,255	0/1:17,16:38:172,0,176	0/0:30,3:33:0,48,255
-chr21	5859014	chr21:5859014:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,1:15:0,26,98,16,76,77	0/1:2,3,0:5:12,0,4,24,13,53	0/2:6,0,3:11:1,16,65,0,29,33
-chr21	5866538	chr21:5866538:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:13,4:17:1,0,110	0/0:17,2:21:0,33,198	0/1:3,4:9:44,0,12
-chr21	5877636	chr21:5877636:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,3:15:0,7,100	0/1:7,7:16:34,0,53	0/1:16,6:22:7,0,117
-chr21	5878736	chr21:5878736:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/1:21,9:30:44,0,218	0/0:33,3:36:0,60,255	0/1:24,12:36:69,0,240
-chr21	5881133	chr21:5881133:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:2,4:6:32,0,8	0/1:3,1:4:1,0,25	.
-chr21	5883554	chr21:5883554:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:13:22,0,56	0/0:28,4:34:0,47,255	0/1:22,10:33:24,0,169
-chr21	5893572	chr21:5893572:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:2,15:17:176,21,0	1/1:2,14:17:158,19,0	1/1:0,14:14:187,39,0
-chr21	5894595	chr21:5894595:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:13:33,0,115	0/1:6,12:18:152,0,49	0/1:6,9:16:119,0,59
-chr21	5904716	chr21:5904716:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,25,113	0/0:5,0:5:0,14,62	0/1:8,4:13:14,0,76
-chr21	5910071	chr21:5910071:M	GGGAGGGGGGAGGGA	<3.5>	.	.	Motif=GGGA	GT:AD:DP:PL	0/0:19,2:21:0,10,255	0/1:8,3:11:43,0,171	0/0:17,0:17:0,51,255
-chr21	5914951	chr21:5914951:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,10,0:33:68,0,255,135,255,255	0/2:12,9,9:31:187,22,124,0,68,255	0/0:40,0,0:41:0,119,255,123,255,255
-chr21	5972367	chr21:5972367:M	TTTTGTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,29,180	0/0:3,0:5:0,14,74	0/1:5,3:8:29,0,64
-chr21	5980542	chr21:5980542:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,11:12:185,17,0	0/1:2,12:16:163,0,11	1/1:1,8:9:127,8,0
-chr21	5981384	chr21:5981384:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:7:34,0,52	0/1:6,1:9:3,0,89	0/0:9,1:13:0,5,140
-chr21	5983797	chr21:5983797:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4,0:10:85,0,115,70,132,199	0/1:1,2,1:5:55,0,16,18,12,44	0/2:2,0,3:5:69,49,92,0,52,45
-chr21	5990439	chr21:5990439:M	TTTTTTTTTTTGTTGTTGTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:17:119,0,91	0/1:6,13:19:174,0,50	0/1:9,3:12:20,0,129
-chr21	5990535	chr21:5990535:M	TTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:15:156,0,174	0/1:3,0:5:13,0,86	0/0:7,0:9:0,9,189
-chr21	5996445	chr21:5996445:M	TTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,6:14:255,111,133,160,0,135	0/1:4,10,2:17:253,0,86,230,33,255	1/2:0,12,3:18:255,60,40,255,0,255
-chr21	6005386	chr21:6005386:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:9,9:18:124,0,121	0/1:9,8:17:98,0,113	0/1:7,14:21:207,0,70
-chr21	6020382	chr21:6020382:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTGTGTGTG	<21>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,3:3:95,9,0	0/1:4,5:9:131,0,86	0/1:4,3:8:72,0,102
-chr21	6040905	chr21:6040905:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:26:203,0,128	0/1:10,6:17:65,0,127	0/1:12,10:23:115,0,161
-chr21	6070033	chr21:6070033:M	TGTGTGTGAGGTGTGTGGTGTGTGTG	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,14:33:71,0,255	0/1:30,12:42:19,0,255	0/1:26,16:42:68,0,255
-chr21	6070105	chr21:6070105:M	TGTGTGTGTAGTGTATGTGGTTGTGTG	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,14:36:66,0,255	0/1:27,12:39:31,0,255	0/1:30,16:46:60,0,255
-chr21	6071721	chr21:6071721:M	GGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/1:1,3:4:40,0,5	1/1:0,1:1:17,3,0	1/1:0,3:3:51,9,0
-chr21	6072175	chr21:6072175:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:10:42,0,78	0/0:2,0:2:0,6,34	1/1:0,1:1:18,3,0
-chr21	6073138	chr21:6073138:M	CCCCCCCACCCCCCCCC	<16>,<18>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,16,0:16:216,45,0,255,48,255	1/2:0,3,1:4:41,12,12,38,0,61	1/2:0,3,3:6:62,39,55,39,0,56
-chr21	6075369	chr21:6075369:M	TTTTTTTTTTAGTTTTTTAGTTTTTGTTTTTTTTGCTTTTTTTTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:7:33,0,52	0/0:4,0:4:0,12,69	0/1:1,1:2:12,0,12
-chr21	6097940	chr21:6097940:M	CACACACACACACACACACACACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:28:0,82,255	0/1:16,8:26:62,0,220	0/0:31,1:33:0,79,255
-chr21	6100222	chr21:6100222:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,13,7:21:255,105,63,177,0,180	0/2:22,1,6:31:93,94,255,0,255,255	1/1:2,18,3:23:255,32,0,242,15,255
-chr21	6109896	chr21:6109896:M	GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<27>,<29>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,5,4:10:255,255,255,108,108,88,143,142,0,128	1/2:0,3,4,0:9:211,130,120,81,0,66,209,127,84,209	3/3:0,0,0,6:6:184,184,184,179,179,175,18,18,18,0
-chr21	6132994	chr21:6132994:M	ATATATATATATATATATATATATATA	<12.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:2,0,5:8:137,143,168,0,31,35	1/2:0,6,1:7:97,23,6,90,0,156	0/0:9,0,0:10:0,29,151,30,178,255
-chr21	6222189	chr21:6222189:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,7:38:0,6,255	0/0:35,0:36:0,102,255	0/1:15,14:30:116,0,142
-chr21	6228654	chr21:6228654:M	TTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:8:68,0,52	0/0:4,0:5:0,12,107	0/1:4,2:18:46,0,159
-chr21	6240057	chr21:6240057:M	AGAGAGAGAGAAGGAAAGAAAGAAAGAGAGAGA	<5.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:4,0:5:0,3,94	0/1:9,4:13:111,0,244	.
-chr21	6256852	chr21:6256852:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,17:26:233,0,64	0/1:6,5:11:51,0,68	0/1:17,22:41:255,0,182
-chr21	6257009	chr21:6257009:M	AAAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,4:15:81,58,255,0,220,202	0/1:5,6,0:11:181,0,105,72,120,175	0/2:8,0,5:14:96,60,255,0,208,193
-chr21	6257055	chr21:6257055:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,21:23:255,18,0	1/1:0,5:5:140,15,0	0/1:16,25:46:255,0,255
-chr21	6257476	chr21:6257476:M	ACAACAACAACAACAACAACA	<10>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:5,4:10:86,0,97	0/1:12,2:15:10,0,255	0/1:3,2:9:61,0,59
-chr21	6258497	chr21:6258497:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,12:17:231,0,48	0/1:3,6:10:123,0,41	1/1:0,14:14:255,42,0
-chr21	6263230	chr21:6263230:M	CTGAAACTGAAA	<2.2>	.	.	Motif=CTGAAA	GT:AD:DP:PL	0/1:16,11:28:53,0,104	0/0:16,3:20:0,19,150	0/1:12,11:24:66,0,70
-chr21	6263239	chr21:6263239:M	AAAAGAAAAAAACAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,9:27:252,0,255	0/1:17,2:21:3,0,255	0/1:8,8:16:238,0,190
-chr21	6263552	chr21:6263552:M	TTTTTTTTTTTATTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:13:151,0,78	0/1:3,4:8:94,0,53	0/1:3,6:12:151,0,41
-chr21	6265649	chr21:6265649:M	AAAAAAAAAAAA	<10>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12,9:38:117,0,215,130,17,255	0/0:25,5,2:42:0,9,255,85,218,255	1/2:2,16,13:36:255,81,237,236,0,255
-chr21	6266473	chr21:6266473:M	AAAAAAAAAAAAACAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,8,7:22:247,17,54,35,0,39	0/2:16,1,7:31:84,26,255,0,255,240	0/1:5,7,9:23:232,0,66,1,0,30
-chr21	6268291	chr21:6268291:M	TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTTCTTCTTCTCCTTCTTC	<22.7>	.	.	Motif=TCT	GT:AD:DP:PL	1/1:0,3:5:90,9,0	1/1:0,2:5:106,12,0	0/0:0,0:1:0,0,0
-chr21	6268762	chr21:6268762:M	TGTGTGTGTGTG	<7>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,23:23:255,63,0	1/1:0,1:1:11,3,0	1/1:2,24:27:244,39,0
-chr21	6270105	chr21:6270105:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:72,14,0	0/1:3,2:5:14,0,28	0/0:1,0:1:0,3,14
-chr21	6284922	chr21:6284922:M	TGTGTGTGTGTGTGTGTGTGTGTGGTGTGTTTGTGTGT	<17>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,14:14:255,42,0	0/1:5,8:14:130,0,57	1/1:0,23:23:255,68,0
-chr21	6299706	chr21:6299706:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:3,1:5:9,0,29	0/1:4,5:14:67,0,26	.
-chr21	6299731	chr21:6299731:M	TTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3,0:10:13,0,27,31,49,149	0/2:3,1,3:7:55,42,54,0,19,64	0/0:2,0,0:2:0,5,19,6,25,49
-chr21	6300103	chr21:6300103:M	AAAAAAAAAAAAAAGAAAAAGAAAAGAAAAGAAAAAAA	<37>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4,0:6:23,0,4,40,21,125	1/2:3,5,5:14:90,76,114,19,0,115	1/1:0,3,0:5:28,8,0,37,9,78
-chr21	6300733	chr21:6300733:M	CACACACAAACACATCACACACACACACACACACACACA	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:4,0:4:0,10,37	0/1:5,3:8:7,0,26	.
-chr21	6305211	chr21:6305211:M	TTTTTTTTCTTTTTTCTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:17:196,15,0	0/1:4,9:13:107,0,26	1/1:0,20:20:255,58,0
-chr21	6308951	chr21:6308951:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,3:8:142,74,107,80,0,65	0/1:0,2,0:3:51,0,12,54,15,67	1/2:0,0,2:4:49,44,70,12,0,3
-chr21	6315192	chr21:6315192:M	ACACACACACAGACAGACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,5:9:54,0,38	0/1:18,5:23:11,0,211	1/1:0,3:3:47,9,0
-chr21	6320083	chr21:6320083:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,7:36:21,0,255	0/0:19,1:20:0,41,255	0/1:19,9:28:74,0,250
-chr21	6325896	chr21:6325896:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:200,23,0	0/1:19,4:24:6,0,243	0/1:14,4:18:15,0,184
-chr21	6334410	chr21:6334410:M	TTGTTGTATGTTGTTTTATTGTTGCTTTTATTGATGTATGTTGTTTTTTGTTGCTTTTATTGTTGTTGTT	<13.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:5,4:11:91,0,102	0/1:9,2:20:26,0,201	0/1:4,1:7:14,0,89
-chr21	6335235	chr21:6335235:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:19:59,0,97	0/1:13,5:21:10,0,152	0/0:6,0:6:0,17,84
-chr21	6337885	chr21:6337885:M	AAAAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,9,7:27:123,66,137,0,12,255	0/1:20,18,2:43:125,0,139,194,205,255	0/2:14,13,7:36:111,33,137,0,12,255
-chr21	6351126	chr21:6351126:M	AAAATAAAATAAA	<2.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:34,6:40:0,40,255	0/0:37,5:42:0,57,255	0/1:31,16:47:55,0,226
-chr21	6352933	chr21:6352933:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/1:15,16:31:177,0,161	0/1:17,8:25:56,0,200	0/0:19,3:22:0,15,255
-chr21	6356407	chr21:6356407:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:12:218,39,9,169,0,158	1/2:0,1,0:4:62,31,28,29,0,22	1/2:0,2,3:10:202,85,67,109,0,93
-chr21	6371108	chr21:6371108:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>,<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,4,3:23:255,57,46,188,0,132,255,14,163,255	2/3:5,1,3,10:30:115,57,255,16,90,57,28,11,0,13	1/2:3,9,7,1:28:255,43,91,130,0,110,250,22,135,227
-chr21	6374684	chr21:6374684:M	AAAAAAAAAAAAAAGAAAAGAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:70,6:84:0,94,255	0/1:41,17:68:93,0,255	0/0:82,3:93:0,216,255
-chr21	6376674	chr21:6376674:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,116:144:255,255,0	1/1:2,75:138:255,255,0	1/1:0,113:113:255,255,0
-chr21	6441721	chr21:6441721:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:40,0,22	0/1:3,5:8:63,0,28	0/1:2,0:3:1,0,27
-chr21	6444559	chr21:6444559:M	AAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,15:17:255,0,9	0/1:2,12:16:255,0,12	0/0:2,0:4:0,9,73
-chr21	6445451	chr21:6445451:M	GCCAGGCCAGGC	<1.4>	.	.	Motif=GCCAG	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:21,0:21:0,62,255	0/1:10,8:18:97,0,135
-chr21	6452919	chr21:6452919:M	TTTTCTTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:17:147,0,62	0/1:3,8:12:109,0,20	0/0:12,0:12:0,35,217
-chr21	6480511	chr21:6480511:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,72	.	0/1:5,3:10:25,0,76
-chr21	6523931	chr21:6523931:M	AAGAAGAAGAAGAAGAAGAA	<8.7>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:13,9:27:140,0,255	0/1:2,14:18:255,0,15	0/0:17,0:18:0,51,255
-chr21	6544947	chr21:6544947:M	TTTTTCGTTTTTGTTTTTGTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:2,2:4:24,0,24	0/0:11,0:11:0,32,198	0/1:4,6:10:78,0,43
-chr21	6559518	chr21:6559518:M	AATAATAATAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:9,0:9:0,27,253	0/0:8,0:8:0,24,225	0/1:11,12:23:255,0,241
-chr21	6572511	chr21:6572511:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/1:6,3:9:29,0,83	0/0:20,0:20:0,59,255
-chr21	6572679	chr21:6572679:M	TGTGTGTGTGTGTGTGGGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:14,2:16:0,7,231	0/0:11,0:11:0,32,200	1/1:0,7:7:135,21,0
-chr21	6576800	chr21:6576800:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:17:115,0,96	0/0:11,0:11:0,32,192	1/1:1,20:21:255,44,0
-chr21	6632687	chr21:6632687:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5,0:8:185,21,0,174,17,168	1/2:0,3,1:6:107,27,17,78,0,73	1/2:0,3,3:12:252,144,126,93,0,67
-chr21	6637988	chr21:6637988:M	TTTATTTTATTTT	<2.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/0:40,4:44:0,73,255	0/0:33,4:38:0,55,255	0/1:29,14:44:48,0,239
-chr21	6651229	chr21:6651229:M	TTTTTTTTTTTTT	<12>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,5,6:18:111,70,115,0,4,195	0/1:16,14,1:32:92,0,129,159,192,255	1/2:10,15,7:34:184,62,124,64,0,255
-chr21	6653878	chr21:6653878:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:19:31,0,111	0/1:16,6:23:21,0,154	0/0:6,0:6:0,17,83
-chr21	6654647	chr21:6654647:M	AACAACAACAATAAAAGCAACAAAAAACAACATACATCAATAAAAGCAACAATAAAACAACATACAACAA	<13.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:7,7:18:143,0,141	0/1:17,12:36:228,0,255	1/1:1,10:14:239,7,0
-chr21	6660338	chr21:6660338:M	TTTTTTTATTTTATTTTATTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,2:18:0,5,255	0/0:20,1:25:0,38,255	0/1:8,4:12:62,0,148
-chr21	6663216	chr21:6663216:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:166,29,0	0/1:11,5:16:36,0,135	0/1:11,3:15:10,0,146
-chr21	6664000	chr21:6664000:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,3:35:0,58,255	0/0:47,6:53:0,69,255	0/1:29,11:40:36,0,255
-chr21	6666585	chr21:6666585:M	AAAAAAAAAAAAAACAAAAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,54,255	0/0:6,0:6:0,18,155	0/1:11,4:16:55,0,234
-chr21	6669849	chr21:6669849:M	AAAAAACAAAAAACAAACAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:65,0,231	0/1:11,4:15:62,0,251	0/0:5,0:7:0,18,149
-chr21	6673910	chr21:6673910:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,2:11:3,0,125	0/1:13,4:17:17,0,167	1/1:0,5:5:86,15,0
-chr21	6680131	chr21:6680131:M	ACACACACACACACACACACACACACACACACACACACACACACA	<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,5:7:127,18,0	0/1:3,0:7:12,0,50	1/1:0,4:8:107,15,0
-chr21	6683887	chr21:6683887:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<27>,<28>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,8:12:166,96,112,33,0,16	2/2:2,0,16:18:227,233,255,20,52,0	2/2:0,0,15:16:251,240,237,44,35,0
-chr21	6688355	chr21:6688355:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,3:4:20,0,0	0/1:2,1:5:15,0,7	.
-chr21	6688986	chr21:6688986:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,2:9:58,23,24,47,0,137	0/2:5,0,4:13:46,72,137,0,50,65	1/1:0,2,0:3:19,5,0,25,6,50
-chr21	6689379	chr21:6689379:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4,2:9:53,0,35,21,12,27	0/2:4,1,4:10:21,20,92,0,37,21	0/1:4,2,0:7:16,0,69,16,43,45
-chr21	6689395	chr21:6689395:M	AGAGAGAGAGAGAGGGAGAGAGAGAG	<12.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:4,0:9:0,1,83	0/1:4,4:13:56,0,71	0/1:0,0:4:3,0,4
-chr21	6703136	chr21:6703136:M	CTCTCTCTCTCCCTCTCTCTCTCTCT	<13.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:3,3:6:4,0,4	0/0:3,0:4:0,7,19	1/1:0,1:1:5,2,0
-chr21	6703161	chr21:6703161:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:133,15,0	0/1:4,2:6:36,0,91	0/1:1,1:2:22,0,21
-chr21	6704167	chr21:6704167:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,21:24:255,62,0	1/1:1,9:13:160,10,0	1/1:0,21:21:255,62,0
-chr21	6710597	chr21:6710597:M	AAAAGAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,4:6:118,48,31,23,0,6	1/1:0,0,0:1:18,3,0,13,3,11	1/1:0,3,0:3:84,9,0,44,8,35
-chr21	6720353	chr21:6720353:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,19:20:255,37,0	0/1:3,3:6:47,0,48	0/1:2,22:27:255,0,19
-chr21	6720744	chr21:6720744:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,5:9:58,14,0	1/1:0,4:8:47,11,0	1/1:0,3:4:35,8,0
-chr21	6723466	chr21:6723466:M	TTTTTTTTTTTT	<10>,<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,8,12,5:37:80,17,231,0,76,55,127,102,43,255	0/2:17,1,9,1:28:17,55,255,0,144,85,76,205,100,236	1/3:5,23,1,14:43:255,75,255,245,207,255,255,0,174,255
-chr21	6725552	chr21:6725552:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,9:15:218,0,34	0/1:4,4:10:80,0,89	0/1:4,5:11:116,0,71
-chr21	6725868	chr21:6725868:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,7:27:120,0,255	0/1:9,3:14:49,0,208	0/1:12,9:21:201,0,255
-chr21	6730614	chr21:6730614:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,18:23:255,0,29	0/1:10,6:17:84,0,182	1/1:0,23:24:255,72,0
-chr21	6732265	chr21:6732265:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,15:27:152,0,106	0/1:12,5:17:25,0,129	0/1:3,12:15:138,0,2
-chr21	6828166	chr21:6828166:M	ATGAAGAACTGAATGAATGAATGAATGAATGAATGAAT	<10.5>	.	.	Motif=ATGA	GT:AD:DP:PL	1/1:0,14:14:255,41,0	0/1:15,8:23:78,0,203	0/1:11,6:17:63,0,155
-chr21	6987408	chr21:6987408:M	TTTTTTTATTTTATTTTATTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,4:15:54,0,215	0/0:18,0:21:0,54,255	0/1:6,3:10:46,0,134
-chr21	6990286	chr21:6990286:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:13:121,0,17	0/0:20,4:24:0,4,255	0/1:5,5:10:56,0,56
-chr21	6991070	chr21:6991070:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,4:46:0,75,255	0/0:35,6:41:0,35,255	0/1:35,16:52:81,0,255
-chr21	6993655	chr21:6993655:M	AAAAAAAAAAAAAACAAAAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,51,255	0/0:13,0:14:0,39,255	0/1:8,5:14:97,0,166
-chr21	7000980	chr21:7000980:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,3:14:13,0,155	0/1:18,4:22:4,0,241	1/1:0,5:5:88,15,0
-chr21	7007201	chr21:7007201:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<16.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,5,0,3:13:223,73,91,154,108,174,139,0,81,143	0/1:3,4,0,0:8:110,0,61,68,75,130,119,62,130,175	2/3:1,0,3,3:11:150,131,186,90,153,145,55,41,0,54
-chr21	7010957	chr21:7010957:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:18:255,52,0	0/1:6,19:26:232,0,32	1/1:0,9:9:149,26,0
-chr21	7016056	chr21:7016056:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>,<40>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,5,2:8:50,22,23,38,0,111	0/2:3,1,5:11:71,76,111,0,9,47	1/1:0,3,0:3:28,8,0,37,9,75
-chr21	7016449	chr21:7016449:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:7:1,0,67	0/1:5,2:10:12,0,80	0/1:3,3:6:37,0,37
-chr21	7031236	chr21:7031236:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,13:16:255,39,0	0/1:2,10:12:162,0,4	1/1:0,19:19:255,56,0
-chr21	7046078	chr21:7046078:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:17,3,0	0/1:9,6:15:53,0,102	0/0:4,0:4:0,12,66
-chr21	7047422	chr21:7047422:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,17:17:255,51,0	0/0:2,0:4:0,11,64	1/1:0,29:30:255,71,0
-chr21	7047813	chr21:7047813:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,2:5:23,5,0	1/1:0,1:3:12,3,0	1/1:0,7:7:82,19,0
-chr21	7050535	chr21:7050535:M	TTTTTTTTTTTT	<10>,<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/3:7,15,5,10:37:177,15,205,98,112,152,180,0,70,255	0/2:14,1,9,5:29:14,56,255,0,152,90,42,148,50,173	1/3:4,16,4,13:37:241,67,249,163,168,216,219,0,93,255
-chr21	7052621	chr21:7052621:M	AAAAAAAAAAATAAAAAAAAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,5:9:151,36,30,14,0,15	0/2:3,0,5:9:111,52,93,0,60,61	0/2:2,2,7:11:174,53,62,0,15,21
-chr21	7052937	chr21:7052937:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,7:25:122,0,255	0/0:19,2:21:0,6,255	0/1:8,9:19:196,0,166
-chr21	7057683	chr21:7057683:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,9:12:176,0,34	0/1:2,7:9:129,0,20	1/1:1,11:13:231,12,0
-chr21	7058699	chr21:7058699:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:6,5:11:96,0,120	0/0:16,1:18:0,23,255	0/1:4,2:9:40,0,96
-chr21	7059170	chr21:7059170:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:12:158,0,103	0/1:5,0:6:14,0,126	0/1:1,3:5:75,0,30
-chr21	7059334	chr21:7059334:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,16:29:162,0,116	0/1:12,3:15:1,0,135	0/1:5,10:15:108,0,33
-chr21	7078099	chr21:7078099:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:2,3:6:71,0,44	0/1:1,3:5:78,0,17	1/1:0,1:1:31,3,0
-chr21	7084755	chr21:7084755:M	AAAAGAAAAACAAAAA	<2.8>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:17,2:19:0,29,174	0/1:13,5:18:9,0,102	0/0:19,4:23:0,16,174
-chr21	7087530	chr21:7087530:M	AAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,1,0:7:0,1,58,6,24,33	0/0:3,0,0:5:0,9,49,6,31,23	1/2:3,4,4:15:52,24,119,34,0,57
-chr21	7093992	chr21:7093992:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,5:27:0,5,248	0/0:29,2:31:0,60,255	0/1:14,10:25:73,0,141
-chr21	7103609	chr21:7103609:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:15,6:22:13,0,132	0/0:15,0:15:0,41,178	0/0:17,4:24:0,14,170
-chr21	7108897	chr21:7108897:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>,<8.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	1/2:2,3,3:11:53,15,40,45,0,89	1/1:1,4,0:8:55,7,0,72,18,119	1/1:0,9,1:10:95,17,0,110,8,178
-chr21	7119855	chr21:7119855:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,9:15:185,0,38	0/1:6,6:14:130,0,80	0/1:4,12:16:209,0,34
-chr21	7126061	chr21:7126061:M	ATTTATTTATTT	<2.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:9,4:14:9,0,34	0/1:9,7:16:16,0,30	1/1:6,14:22:68,4,0
-chr21	7134149	chr21:7134149:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,7:26:85,0,255	0/1:15,15:36:246,0,249	0/1:27,9:45:111,0,255
-chr21	7144022	chr21:7144022:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,7:7:204,21,0	1/1:0,1:1:32,3,0	1/1:0,5:5:149,15,0
-chr21	7149280	chr21:7149280:M	TTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,18	0/0:0,0:1:0,3,18	0/1:0,3:7:84,0,12
-chr21	7232451	chr21:7232451:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:31,8,0	0/1:1,1:2:5,0,5	0/1:2,2:6:19,0,6
-chr21	7234039	chr21:7234039:M	TTGTGTTGTGT	<1.8>	.	.	Motif=TTGTG	GT:AD:DP:PL	0/1:59,17:76:237,0,255	0/0:49,0:49:0,147,255	0/1:43,46:89:255,0,255
-chr21	7257612	chr21:7257612:M	AGTGGAGTGGAGTGGAGTGGAGTTGATCAGAGTGCAGTGGAATTGAATGGAATGGACTGGAATGGAATAGAGTGGAGTGGAGGGGAGTGG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	0/1:2,12:14:102,0,11	1/1:1,13:14:128,14,0	1/1:1,14:15:140,16,0
-chr21	7258025	chr21:7258025:M	GGAATGGAAATGAATGGAATGGAATGGAATG	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:40,340:461:255,0,255	0/1:27,375:508:255,0,255	0/1:46,431:542:255,0,255
-chr21	7261697	chr21:7261697:M	GAATGGAATGGAATGGAGTGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	0/1:62,168:230:255,0,255	0/1:29,177:206:255,0,209	0/1:68,228:296:255,0,255
-chr21	7261758	chr21:7261758:M	AATGGAGTGGAATGGAAT	<27>	.	.	Motif=AATGG	GT:AD:DP:PL	0/1:148,167:315:255,0,255	0/1:123,177:300:255,0,255	0/1:130,225:355:255,0,255
-chr21	7261787	chr21:7261787:M	GAGTGGACTGGAGTGGAGTGGAGTTTAGTGGAGTG	<27>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:39,29:68:161,0,255	0/1:28,27:55:175,0,255	0/1:37,49:86:255,0,255
-chr21	7301246	chr21:7301246:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:37,17:56:12,0,207	1/1:3,26:31:219,50,0	0/0:50,1:63:0,147,255
-chr21	7304153	chr21:7304153:M	AAATAATAAATAAATAAATAAATAAA	<6>,<7.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:18,7,8:42:0,38,220,15,134,255	1/2:0,5,10:18:99,95,148,30,0,65	0/0:43,6,0:60:0,83,255,160,255,255
-chr21	7318946	chr21:7318946:M	AATAATAATAAAATAAAATAAAATAAAATAAA	<7.6>	.	.	Motif=AATAA	GT:AD:DP:PL	0/1:25,16:41:153,0,255	0/1:15,13:29:140,0,169	0/0:37,5:45:0,35,255
-chr21	7382758	chr21:7382758:M	TGTGTGTGTCTGTCTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,2:9:9,0,95	0/1:14,9:23:83,0,165	1/1:0,3:3:52,9,0
-chr21	7388979	chr21:7388979:M	ACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,2,3:7:135,94,98,48,0,33	0/1:5,4,0:11:92,0,124,109,108,205	2/2:0,0,6:6:128,140,168,18,18,0
-chr21	7392735	chr21:7392735:M	AAAAAAAAAAAAAGAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,14:20:215,7,0	0/1:4,16:21:207,0,3	1/1:2,15:17:214,17,0
-chr21	7397203	chr21:7397203:M	TGTGTGTGTGTGTGTGTGTGTGTGATGTGTTTGTGTGTG	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:7:11,0,20	0/1:3,5:9:33,0,5	0/0:0,0:1:0,2,9
-chr21	7397834	chr21:7397834:M	TTTTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:13,0,13	0/0:6,2:11:0,4,44	1/1:0,5:6:56,15,0
-chr21	7398227	chr21:7398227:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3,0:9:32,0,55,25,38,48	0/2:6,1,3:10:11,14,102,0,46,31	0/1:1,2,0:3:28,0,10,17,8,19
-chr21	7412009	chr21:7412009:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:79,9,0	0/1:2,3:6:65,0,40	.
-chr21	7413015	chr21:7413015:M	ACACACAAACACACCACACACACACACACACACACACA	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:21:255,56,0	0/1:2,9:14:147,0,8	1/1:0,24:25:255,74,0
-chr21	7429200	chr21:7429200:M	CACACACACACA	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,7:7:156,21,0	0/1:3,4:7:67,0,45	1/1:0,27:28:255,76,0
-chr21	7429591	chr21:7429591:M	GAAGAAGGAGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	<23.7>,<45>	.	.	Motif=GAA	GT:AD:DP:PL	1/2:0,0,2:7:90,20,5,71,0,65	1/2:0,0,2:3:39,20,17,19,0,13	1/2:0,3,4:7:115,40,31,75,0,63
-chr21	7432313	chr21:7432313:M	TTTTTTTTTTTT	<10>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,15,3:29:183,0,78,225,36,255	0/0:22,4,4:33:0,21,255,46,171,207	1/2:1,19,14:37:255,102,238,255,0,255
-chr21	7434399	chr21:7434399:M	AAAAAAAAAAATAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:19:238,0,107	0/1:3,5:9:114,0,49	0/1:4,6:13:136,0,70
-chr21	7434715	chr21:7434715:M	TTTTTTTGTTTTTTTCTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:25:219,0,255	0/1:20,3:23:16,0,255	0/1:5,4:15:105,0,101
-chr21	7439461	chr21:7439461:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,8:14:156,0,55	1/1:0,2:2:44,6,0	1/1:2,15:17:255,4,0
-chr21	7440477	chr21:7440477:M	TGTTGTTGTTGTTGTTGTTGT	<10>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:9,3:13:51,0,189	0/0:9,1:11:0,2,200	0/1:6,7:16:147,0,127
-chr21	7440948	chr21:7440948:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:9:54,0,144	0/1:3,0:6:20,0,76	0/1:2,3:7:96,0,34
-chr21	7441112	chr21:7441112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,18:32:183,0,122	0/1:7,6:13:51,0,66	0/1:12,16:29:158,0,108
-chr21	7455244	chr21:7455244:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAAAAAA	<53>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:28,9,0	1/1:0,1:3:7,2,0	1/1:0,2:3:14,4,0
-chr21	7457885	chr21:7457885:M	TCTCTCTCTTTCTTTCTTTCCTTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:4,1:6:48,0,108	0/1:5,2:8:76,0,191	1/1:0,3:3:82,9,0
-chr21	7458909	chr21:7458909:M	TTTATTTATCTGTTTATTTACTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:10,1:11:0,16,144	0/1:7,3:10:18,0,79	0/1:4,2:6:14,0,45
-chr21	7459877	chr21:7459877:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,1:1:26,3,0	1/1:0,1:1:26,3,0	1/1:0,4:4:95,12,0
-chr21	7469308	chr21:7469308:M	AAAAAAAAAAAAA	<11>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8,3:17:91,0,42,50,1,193	0/2:4,0,3:9:81,94,148,0,63,77	0/2:4,3,2:14:50,28,88,0,20,92
-chr21	7475770	chr21:7475770:M	AAAAAGAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,7:29:19,0,237	0/1:16,6:22:22,0,163	0/1:17,25:46:228,0,157
-chr21	7485387	chr21:7485387:M	CAAACAAACAAACAAACAAACA	<6.5>	.	.	Motif=CAAA	GT:AD:DP:PL	0/0:14,3:18:0,13,144	0/0:20,0:21:0,57,248	0/1:14,6:20:17,0,113
-chr21	7490675	chr21:7490675:M	TTATGATTATGATTATGATTATGATTATGATTATGATTATGATTAT	<6.7>	.	.	Motif=TTATGA	GT:AD:DP:PL	0/1:4,8:14:70,0,12	0/1:4,6:10:43,0,19	1/1:0,9:13:127,25,0
-chr21	7551450	chr21:7551450:M	TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<7>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:3,9:12:107,0,12	1/1:2,12:14:151,10,0	1/1:0,27:27:255,78,0
-chr21	7561497	chr21:7561497:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,6:24:3,0,138	0/0:19,3:22:0,26,177	0/0:19,6:26:0,3,156
-chr21	7563872	chr21:7563872:M	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTGTTTTATTTTATTTTA	<10.4>	.	.	Motif=TATTT	GT:AD:DP:PL	0/1:3,5:8:40,0,15	0/1:3,2:5:11,0,23	0/1:4,3:9:22,0,27
-chr21	7567415	chr21:7567415:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,9:23:38,0,93	0/1:13,7:21:21,0,96	0/1:16,10:27:38,0,115
-chr21	7578497	chr21:7578497:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:20:0,54,232	0/1:10,5:15:18,0,77	0/1:7,5:16:57,0,41
-chr21	7586029	chr21:7586029:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:8:5,0,22	0/0:1,0:4:0,6,19	0/1:2,1:4:7,0,7
-chr21	7587421	chr21:7587421:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,3:21:0,3,255	0/1:7,3:11:28,0,105	0/1:8,4:17:34,0,147
-chr21	7607157	chr21:7607157:M	CACACACACACA	<7>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,9:31:66,0,255	0/0:32,5:39:0,31,255	0/0:39,4:44:0,61,255
-chr21	7607327	chr21:7607327:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,4:5:109,11,0	0/1:0,0:3:1,0,5
-chr21	7612522	chr21:7612522:M	AAAGAAAGAAAGAAAAAAGAAGAGAGAAAGAAAGAAGGAAAGAAAGAGAGAAAGAAAGAAGACAGAAAAGGAAAGAAAGAAAGAAA	<15.2>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,2:5:35,0,66	1/1:0,5:6:130,15,0	0/1:4,6:10:125,0,77
-chr21	7613641	chr21:7613641:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:11:6,0,112	0/1:2,3:6:38,0,20	0/1:6,2:8:11,0,82
-chr21	7636763	chr21:7636763:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,11:23:246,0,58	0/1:7,8:16:130,0,97	0/1:9,10:20:148,0,140
-chr21	7647685	chr21:7647685:M	ATAATCATAATCATAATCATAATCATAATCATAATCATAATCATAA	<6.7>,<8.7>	.	.	Motif=ATAATC	GT:AD:DP:PL	1/1:2,9,1:17:121,8,0,150,21,255	0/1:4,11,0:18:111,0,1,155,41,255	1/2:0,7,3:10:94,35,40,84,0,134
-chr21	7662620	chr21:7662620:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:25:0,71,255	0/0:21,4:25:0,15,240	0/1:12,13:27:110,0,118
-chr21	7669085	chr21:7669085:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,1:18:0,19,162	0/0:9,0:10:0,26,144	0/1:6,6:17:51,0,100
-chr21	7756074	chr21:7756074:M	AAAAAAAAAAAACAAAAAAAACCAAAAAAAAAAACCAAAAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,3:11:20,0,108	0/0:20,0:22:0,64,255	0/0:17,1:18:0,36,255
-chr21	7762615	chr21:7762615:M	ACACACACACACACACACACACCGCACACACACACA	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,255	0/1:7,5:12:54,0,90	0/0:16,0:17:0,50,255
-chr21	7772844	chr21:7772844:M	AAAAAAAGAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:13:56,0,115	0/1:8,10:18:127,0,91	0/1:10,7:18:87,0,134
-chr21	7773308	chr21:7773308:M	TTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:19:246,0,140	0/1:6,9:16:195,0,131	0/1:12,8:21:155,0,255
-chr21	7784201	chr21:7784201:M	CACACACACGCGCACACACACACACACACACACACACACACACACACACA	<26>	.	.	Motif=CA	GT:AD:DP:PL	0/1:8,5:13:51,0,104	0/1:0,1:2:11,0,5	0/0:9,0:10:0,29,167
-chr21	7788458	chr21:7788458:M	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	<6.2>,<9.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/2:0,2,3:5:103,57,75,54,0,45	0/1:5,5,0:10:117,0,116,131,89,208	1/2:0,4,8:12:235,148,197,107,0,84
-chr21	7788509	chr21:7788509:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:24,0,16	0/0:6,0:7:0,19,78	0/1:2,3:5:21,0,9
-chr21	7801440	chr21:7801440:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8:20:128,0,131	0/1:14,9:24:93,0,196	0/1:12,12:26:166,0,161
-chr21	7809419	chr21:7809419:M	TGTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,10:21:136,0,123	0/1:5,4:9:44,0,61	0/1:8,4:12:36,0,109
-chr21	7814549	chr21:7814549:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:9:59,0,116	0/0:3,0:5:0,9,83	0/0:8,0:8:0,24,223
-chr21	7820840	chr21:7820840:M	TTTATTTATTTATTTATTTATTTATTTA	<11>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/1:10,4:14:71,0,239	0/0:17,0:17:0,51,255
-chr21	7822727	chr21:7822727:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,16:22:230,0,37	0/1:10,13:23:160,0,107	0/0:15,0:15:0,44,255
-chr21	7825171	chr21:7825171:M	AAAAAAAAAAAAAAAGAAACAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:12:105,0,4	1/1:1,9:10:128,13,0	0/1:12,13:27:141,0,124
-chr21	7839019	chr21:7839019:M	AAACAAACAAACAAACA	<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,20:20:255,60,0	0/1:11,9:20:193,0,250
-chr21	7847038	chr21:7847038:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,21:21:255,62,0	0/1:13,14:27:187,0,165
-chr21	7851469	chr21:7851469:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:30,0,6	1/1:0,3:3:48,9,0	1/1:1,5:6:67,1,0
-chr21	7860950	chr21:7860950:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:11,0:11:0,33,210	0/0:13,0:14:0,41,244	0/1:3,6:10:83,0,36
-chr21	7915776	chr21:7915776:M	ATTCCATTCCATTC	<27>	.	.	Motif=ATTCC	GT:AD:DP:PL	0/1:119,133:252:255,0,255	0/1:132,147:279:255,0,255	0/1:124,135:259:255,0,255
-chr21	7915808	chr21:7915808:M	TCCATTCCATTCCTTTCCATTCC	<27>	.	.	Motif=TCCAT	GT:AD:DP:PL	0/1:70,134:204:255,0,255	0/1:64,148:212:255,0,255	0/1:62,136:198:255,0,255
-chr21	7957981	chr21:7957981:M	TTCCATTCCACTCCACTCAATTCCATTCCCTTCCATTCTGTTCCATTCCGTTTCATTCCA	<27>	.	.	Motif=TTCCA	GT:AD:DP:PL	0/1:49,52:103:255,0,255	0/1:66,68:135:255,0,255	0/1:62,44:108:219,0,255
-chr21	8108887	chr21:8108887:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:7:0,17,60	0/0:5,1:9:0,10,51	0/1:2,3:8:8,0,22
-chr21	8109940	chr21:8109940:M	TTTCTTTCTTTCTTTCCTTTTCTGTCTTCTTTCTTTCTCTCTTTCTTTCCTTCTTTCTTTCTCTCTTCTTTTTTCTTTCTTTCTTT	<15.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,3:3:89,9,0	1/1:0,3:3:90,9,0	1/1:0,5:5:156,15,0
-chr21	8113624	chr21:8113624:M	ATATAAATATACATATATATAT	<3.5>	.	.	Motif=ATATAA	GT:AD:DP:PL	0/0:20,0:20:0,57,255	0/1:12,4:16:13,0,131	0/1:27,9:36:29,0,255
-chr21	8127279	chr21:8127279:M	TTTTTTTTTTTTTTGTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:35:0,36,226	0/1:16,8:29:47,0,78	0/0:27,0:38:0,6,170
-chr21	8144024	chr21:8144024:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:20,2:22:0,36,219	0/1:14,6:20:17,0,112	0/1:5,6:12:50,0,27
-chr21	8155122	chr21:8155122:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,3:19:0,17,146	0/1:12,5:19:5,0,102	0/1:15,8:24:25,0,113
-chr21	8158619	chr21:8158619:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:4,4:8:27,0,27	0/1:1,1:2:7,0,7	0/1:1,1:3:9,0,5
-chr21	8161040	chr21:8161040:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,5:18:8,0,98	0/0:17,4:21:0,12,144	0/0:14,2:17:0,23,144
-chr21	8171058	chr21:8171058:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:1,8:10:95,12,0	1/1:4,19:23:198,12,0	1/1:0,14:14:188,39,0
-chr21	8172081	chr21:8172081:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:24:144,0,145	0/1:5,15:21:205,0,24	0/1:6,16:23:224,0,38
-chr21	8182202	chr21:8182202:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:30,0,44	0/1:6,2:8:3,0,52	0/1:7,4:11:20,0,57
-chr21	8188839	chr21:8188839:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,3:26:0,24,255	0/1:9,4:14:30,0,111	0/0:24,3:27:0,27,255
-chr21	8192437	chr21:8192437:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:34:46,0,255	0/1:11,13:28:152,0,109	0/0:37,6:45:0,30,255
-chr21	8195715	chr21:8195715:M	TTTTTTTTTTTTTTTTTTTTCTTTTTT	<28>,<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,14,2:20:199,0,9,161,33,253	0/2:3,3,3:9:62,7,30,0,7,62	0/1:4,10,2:18:142,0,19,95,24,183
-chr21	8200710	chr21:8200710:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:9:24,0,74	0/0:5,0:5:0,15,80	0/1:2,3:5:35,0,18
-chr21	8202105	chr21:8202105:M	AAGAAAAGAAAA	<27>	.	.	Motif=AAGAA	GT:AD:DP:PL	0/0:16,1:17:0,39,255	0/1:12,9:21:46,0,255	0/0:18,4:22:0,18,255
-chr21	8202867	chr21:8202867:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<17.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:67,39:212:229,0,255	0/1:129,51:302:129,0,255	0/1:34,58:182:255,0,255
-chr21	8204667	chr21:8204667:M	CCTCCCTCCCTCCCTCCCTCCCTCCCTGCTCCCTTCCCTCCCTCCTTCCCT	<14.8>	.	.	Motif=CCTC	GT:AD:DP:PL	0/1:58,10:76:41,0,255	0/0:49,0:60:0,170,255	0/1:29,10:39:136,0,255
-chr21	8211687	chr21:8211687:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>,<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:171,195,122:584:255,0,255,255,255,255	0/2:209,195,225:797:255,255,255,0,255,255	0/1:257,297,146:815:255,0,255,255,255,255
-chr21	8212486	chr21:8212486:M	GGGGGGGGGCGGGGGG	<15>	.	.	Motif=G	GT:AD:DP:PL	1/1:4,2277:2447:255,255,0	1/1:5,2047:2290:255,255,0	1/1:21,3722:3839:255,255,0
-chr21	8213330	chr21:8213330:M	CCTCCTCCTCC	<3.3>	.	.	Motif=CCT	GT:AD:DP:PL	0/1:121,96:217:255,0,255	0/1:117,86:203:255,0,255	0/1:89,178:267:255,0,255
-chr21	8214735	chr21:8214735:M	GGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG	<10.7>,<11.7>	.	.	Motif=GGC	GT:AD:DP:PL	0/1:137,165,86:499:255,0,255,255,255,255	0/1:157,129,66:435:255,0,255,255,255,255	0/2:143,35,154:353:255,255,255,0,255,255
-chr21	8216067	chr21:8216067:M	CCCCCGCCCCCCCCCC	<17>	.	.	Motif=C	GT:AD:DP:PL	0/1:99,38:142:229,0,255	0/1:133,31:169:3,0,255	0/1:112,26:142:16,0,255
-chr21	8217209	chr21:8217209:M	CCCCCCCCCACCCCAC	<3>	.	.	Motif=CCCCA	GT:AD:DP:PL	1/1:25,214:304:255,255,0	0/1:36,83:140:255,0,60	1/1:23,210:280:255,255,0
-chr21	8218942	chr21:8218942:M	CGCGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:1596,264:2059:255,0,255	0/1:1183,547:1917:255,0,255	0/1:2634,345:3129:255,0,255
-chr21	8219904	chr21:8219904:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTTTCT	<11.5>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:426,375:1393:255,0,255	0/1:343,594:1622:255,0,255	0/1:734,217:1652:255,0,255
-chr21	8220187	chr21:8220187:M	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	<6.2>,<7.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:8,220,368:1221:255,255,255,255,0,255	1/2:4,573,642:1580:255,255,255,255,0,255	1/2:7,569,333:1565:255,255,255,255,0,255
-chr21	8220689	chr21:8220689:M	TTTTTTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:164,99:387:255,0,255	0/1:58,70:304:255,0,255	0/0:321,13:459:0,255,255
-chr21	8220758	chr21:8220758:M	TCTCGCTCTCGCTCTC	<1.3>	.	.	Motif=TCTCGC	GT:AD:DP:PL	0/1:1930,646:2576:255,0,255	0/1:1973,593:2567:255,0,255	0/0:2435,288:2728:0,255,255
-chr21	8221788	chr21:8221788:M	ACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<30>	.	.	Motif=AC	GT:AD:DP:PL	0/1:50,95:371:255,0,255	0/1:48,30:368:255,0,255	0/1:131,98:503:255,0,255
-chr21	8222183	chr21:8222183:M	GGTGGGGTGGGGTG	<5.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,1:4:25,0,30	1/1:0,4:4:110,12,0
-chr21	8222330	chr21:8222330:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<11>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:46,66:367:255,0,255	0/1:31,159:371:255,0,255	0/1:179,30:376:255,0,255
-chr21	8222802	chr21:8222802:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<13.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:27,172,163:545:255,255,255,255,0,255	1/2:53,236,82:707:255,255,255,255,0,255	0/2:156,50,131:676:255,255,255,0,255,255
-chr21	8223498	chr21:8223498:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<11.7>,<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/2:0,11,18:47:255,255,255,255,0,255	1/2:1,7,10:26:255,255,255,234,0,199	2/2:0,2,32:52:255,255,255,97,14,0
-chr21	8224496	chr21:8224496:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<19>	.	.	Motif=TC	GT:AD:DP:PL	0/1:249,306:1763:255,0,255	0/1:177,719:2098:255,0,255	0/1:259,102:1844:255,0,255
-chr21	8225211	chr21:8225211:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<11.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:718,133:1129:255,0,255	0/1:480,175:925:255,0,255	0/1:463,279:1104:255,0,255
-chr21	8226071	chr21:8226071:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<14.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:304,564:1442:255,0,255	0/1:481,795:1718:255,0,255	0/1:324,930:2005:255,0,255
-chr21	8228131	chr21:8228131:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,112,57:175:255,255,255,255,0,255	1/2:0,90,44:144:255,255,255,255,0,255	1/2:0,149,55:210:255,255,255,255,0,255
-chr21	8231395	chr21:8231395:M	GAGAAGAGAGGAGAGAGAGAGAGAGACGGGGAGAGAGGGGGGAGAGGGGGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGA	<67.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,187:187:255,255,0	1/1:0,189:195:255,255,0	1/1:0,166:172:255,255,0
-chr21	8239234	chr21:8239234:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,3:13:168,95,80,58,0,39	1/2:1,2,7:13:228,171,186,24,0,24	1/2:0,4,4:11:212,103,87,103,0,88
-chr21	8243074	chr21:8243074:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:17,43:87:255,0,245	0/1:13,39:70:255,0,223	1/1:9,90:119:255,73,0
-chr21	8245701	chr21:8245701:M	ATACAATACAATACGATACGATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATAC	<12.8>	.	.	Motif=ATACA	GT:AD:DP:PL	0/1:54,195:337:255,0,255	0/1:27,165:446:255,0,255	0/1:77,160:393:255,0,255
-chr21	8246914	chr21:8246914:M	TTTCTTTCTTTCTTTCTTTATTACTTTCTCTTTTTCTT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:964,316:1292:255,0,255	0/1:943,415:1370:255,0,255	0/1:1109,542:1674:255,0,255
-chr21	8247291	chr21:8247291:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:37,72:279:255,0,255	0/1:28,26:219:255,0,255	0/1:59,64:328:255,0,255
-chr21	8253488	chr21:8253488:M	CGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:17,4:21:6,0,217	0/1:13,12:26:119,0,131	0/0:16,0:16:0,47,255
-chr21	8253712	chr21:8253712:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:34,19:59:255,0,255	0/1:86,21:125:194,0,255	0/1:19,16:44:255,0,255
-chr21	8255893	chr21:8255893:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/1:51,90:212:255,0,255	0/1:101,92:304:255,0,255	0/1:138,117:362:255,0,255
-chr21	8256698	chr21:8256698:M	GGGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:3,13:18:255,0,39	0/1:4,6:11:119,0,81	0/1:3,1:4:16,0,67
-chr21	8327069	chr21:8327069:M	CACACACACACACACACACACACACAC	<14.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:21,3:25:0,32,229	0/1:16,8:24:29,0,125	0/1:4,5:9:35,0,23
-chr21	8338167	chr21:8338167:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,5:23:0,7,142	0/1:6,4:11:14,0,45	0/1:12,11:24:56,0,76
-chr21	8339267	chr21:8339267:M	AGAAGAAGAAGA	<3>	.	.	Motif=AGA	GT:AD:DP:PL	0/0:26,3:29:0,40,255	0/0:31,1:32:0,77,255	0/1:30,10:40:29,0,255
-chr21	8341664	chr21:8341664:M	TAAAATAAAATAAAACAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<10.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:3,4:8:32,0,16	0/1:2,3:5:22,0,10	0/1:1,0:3:2,0,6
-chr21	8344085	chr21:8344085:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,9:26:42,0,111	0/0:26,4:30:0,36,246	0/1:18,10:29:35,0,135
-chr21	8354103	chr21:8354103:M	AAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7>	.	.	Motif=AAACA	GT:AD:DP:PL	1/1:0,8:10:110,23,0	0/1:6,15:21:141,0,21	1/1:0,15:15:204,42,0
-chr21	8355126	chr21:8355126:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,11:21:145,0,100	0/1:11,13:24:152,0,118	0/1:7,11:18:140,0,70
-chr21	8375482	chr21:8375482:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,11:41:74,0,255	0/1:18,11:33:113,0,204	0/0:39,2:43:0,92,255
-chr21	8377740	chr21:8377740:M	TTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:71,0,44	0/1:5,1:8:10,0,134	0/0:5,0:9:0,26,204
-chr21	8378760	chr21:8378760:M	TTTTTTTTTTTTTTTTTTTTCTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10,2:21:116,0,80,106,73,255	0/2:3,1,3:8:74,59,91,0,29,74	0/1:9,8,0:18:91,0,96,131,145,255
-chr21	8383755	chr21:8383755:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:16:15,0,154	0/1:8,6:16:62,0,85	0/0:11,2:13:0,5,147
-chr21	8385914	chr21:8385914:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<17.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:64,58:227:255,0,255	0/1:111,59:296:255,0,255	0/1:31,57:178:255,0,255
-chr21	8392532	chr21:8392532:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:21,6:28:81,0,255	0/1:94,20:115:162,0,255	0/1:33,15:53:246,0,255
-chr21	8394722	chr21:8394722:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>,<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:170,179,120:554:255,0,255,255,255,255	0/2:211,203,214:784:255,255,255,0,255,255	0/1:282,344,149:888:255,0,255,255,255,255
-chr21	8395521	chr21:8395521:M	GGGGGGGGGCGGGGGG	<15>	.	.	Motif=G	GT:AD:DP:PL	1/1:5,2318:2504:255,255,0	1/1:10,2064:2322:255,255,0	1/1:18,3744:3867:255,255,0
-chr21	8397769	chr21:8397769:M	GGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG	<10.7>,<11.7>	.	.	Motif=GGC	GT:AD:DP:PL	0/1:38,28,20:109:255,0,255,255,255,255	0/1:38,30,10:93:255,0,255,255,255,255	0/2:28,12,31:78:255,220,255,0,255,255
-chr21	8399101	chr21:8399101:M	CCCCCGCCCCCCCCCC	<17>	.	.	Motif=C	GT:AD:DP:PL	0/1:134,47:184:244,0,255	0/0:195,23:233:0,255,255	0/1:124,29:159:9,0,255
-chr21	8400242	chr21:8400242:M	CCCCCCCCCCCACCCC	<15>,<20>	.	.	Motif=C	GT:AD:DP:PL	1/2:16,62,47:173:255,255,255,255,0,255	0/2:88,40,61:235:255,255,255,0,255,255	1/2:24,44,74:194:255,255,255,255,0,255
-chr21	8402416	chr21:8402416:M	CTCTCGCTCTCTCTCTGTCTCT	<67.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,44:44:255,121,0	1/1:0,40:40:255,110,0	1/1:0,20:20:237,55,0
-chr21	8402454	chr21:8402454:M	CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC	<7.2>,<8.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:0,32,30:91:255,255,255,255,0,255	1/2:0,80,37:171:255,255,169,255,0,255	1/2:0,53,22:129:255,255,118,255,0,255
-chr21	8402956	chr21:8402956:M	TTTTTTTTTTTTTTTTTTT	<24>,<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,29,18,20:76:255,255,255,255,80,255,255,0,233,255	1/3:0,31,40,55:141:255,255,255,255,255,255,255,0,2,255	1/3:0,58,17,50:147:255,255,255,255,255,255,255,0,255,255
-chr21	8402972	chr21:8402972:M	TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,41:41:255,112,0	1/1:0,79:79:255,216,0	1/1:0,51:51:255,140,0
-chr21	8403707	chr21:8403707:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:20,33:85:206,0,255	0/1:15,82:128:255,0,237	0/1:25,44:80:255,0,255
-chr21	8404787	chr21:8404787:M	ACACATACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<30>	.	.	Motif=AC	GT:AD:DP:PL	0/1:32,92:353:255,0,255	0/1:59,51:407:255,0,255	0/1:109,86:460:255,0,255
-chr21	8405182	chr21:8405182:M	GGTGGGGTGGGGTG	<5.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	0/1:0,1:2:22,0,11	0/1:0,0:3:4,0,22	0/1:1,4:6:100,0,23
-chr21	8405329	chr21:8405329:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<12>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:45,120:317:255,0,255	0/1:41,72:305:255,0,255	0/1:212,49:396:255,0,255
-chr21	8405574	chr21:8405574:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<27.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:145,321:869:255,0,255	0/1:178,287:861:255,0,255	0/1:107,56:842:255,0,255
-chr21	8405801	chr21:8405801:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<13.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:40,111,194:576:255,255,255,255,0,255	1/2:70,227,119:809:255,255,255,255,0,255	1/2:166,47,151:808:255,255,255,205,0,255
-chr21	8406497	chr21:8406497:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<11.7>,<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/2:0,10,9:32:255,247,209,255,0,255	1/2:0,7,8:27:255,221,220,204,0,185	2/2:0,0,24:36:255,255,255,65,5,0
-chr21	8407495	chr21:8407495:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<19>	.	.	Motif=TC	GT:AD:DP:PL	0/1:256,282:1794:255,0,255	0/1:188,721:2125:255,0,255	0/1:253,120:1808:255,0,255
-chr21	8408210	chr21:8408210:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<11.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:706,131:1121:255,0,255	0/1:540,198:1000:255,0,255	0/1:463,283:1094:255,0,255
-chr21	8409070	chr21:8409070:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<14.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:271,550:1400:255,0,255	0/1:501,750:1690:255,0,255	0/1:339,888:1944:255,0,255
-chr21	8411130	chr21:8411130:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,96,45:143:255,255,255,255,0,255	1/2:0,88,49:146:255,255,255,255,0,255	1/2:0,129,58:192:255,255,255,255,0,255
-chr21	8422258	chr21:8422258:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,0:3:8,10,37,0,28,25	1/2:0,2,3:5:131,79,73,51,0,42	1/1:0,3,0:5:91,10,0,79,0,77
-chr21	8426098	chr21:8426098:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:19,41:93:255,0,255	0/1:9,48:81:255,0,94	1/1:11,106:145:255,81,0
-chr21	8428725	chr21:8428725:M	ATACAATACAATACGATACGATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATAC	<12.8>	.	.	Motif=ATACA	GT:AD:DP:PL	0/1:51,197:347:255,0,255	0/1:50,167:477:255,0,255	0/1:92,234:474:255,0,255
-chr21	8429938	chr21:8429938:M	TTTCTTTCTTTCTTTCTTTATTACTTTCTCTTTTTCTT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:978,337:1326:255,0,255	0/1:906,441:1360:255,0,255	0/1:1156,522:1693:255,0,255
-chr21	8429966	chr21:8429966:M	TCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	<17.3>	.	.	Motif=TCT	GT:AD:DP:PL	0/1:118,119:460:255,0,255	0/1:83,57:501:255,0,255	0/1:175,122:1001:255,0,255
-chr21	8430315	chr21:8430315:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:45,68:256:255,0,255	0/1:20,17:185:255,0,255	0/1:66,58:322:255,0,255
-chr21	8432061	chr21:8432061:M	CTCCCTCCCTCACTCCCTCCCTCCCTCCCTCCCT	<5.5>,<7.5>	.	.	Motif=CTCC	GT:AD:DP:PL	2/2:0,0,13:14:218,254,255,38,39,0	0/2:1,0,1:2:10,16,52,0,16,10	1/2:0,9,4:14:255,68,72,230,0,210
-chr21	8436522	chr21:8436522:M	CGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/0:16,3:19:0,5,209	0/1:7,9:16:97,0,65	0/0:20,3:24:0,16,255
-chr21	8436746	chr21:8436746:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:18,16:40:255,0,255	0/1:130,31:178:255,0,255	0/1:18,18:42:255,0,255
-chr21	8438935	chr21:8438935:M	GAGAGAGAGAGAGAGAGAGAAAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/1:137,245:599:255,0,255	0/1:219,262:778:255,0,255	0/1:336,354:959:255,0,255
-chr21	8439740	chr21:8439740:M	GGGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:4,4:8:86,0,86	0/1:3,3:7:69,0,58	0/0:4,0:5:0,12,112
-chr21	8443335	chr21:8443335:M	CCCCCGCCCCCCCCCCC	<16>	.	.	Motif=C	GT:AD:DP:PL	0/1:106,59:231:255,0,255	0/1:127,34:215:198,0,255	0/1:183,88:342:255,0,255
-chr21	8444477	chr21:8444477:M	CCCCCCCCCCCACCCC	<15>,<20>	.	.	Motif=C	GT:AD:DP:PL	1/2:20,56,31:153:255,255,255,255,0,255	0/2:79,32,53:215:255,255,255,0,255,255	1/2:21,39,88:211:255,255,255,255,0,255
-chr21	8446212	chr21:8446212:M	CGCGCGCGCGCGCGCGCG	<7>	.	.	Motif=CG	GT:AD:DP:PL	0/1:1560,268:2085:255,0,255	0/1:1181,564:1930:255,0,255	0/0:2660,329:3158:0,194,255
-chr21	8447163	chr21:8447163:M	TTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:16:255,7,0	0/1:2,12:56:255,0,17	1/1:0,40:70:255,169,0
-chr21	8447179	chr21:8447179:M	TTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,30:30:255,86,0	1/1:0,40:47:255,104,0	1/1:0,8:14:112,19,0
-chr21	8447235	chr21:8447235:M	CGCTCTCGCTCTC	<1.7>,<2.3>	.	.	Motif=CGCTCT	GT:AD:DP:PL	1/2:0,3,2:5:90,24,39,71,0,66	.	1/2:0,8,4:12:237,49,79,200,0,191
-chr21	8447914	chr21:8447914:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:17,24:78:186,0,255	0/1:11,49:89:255,0,255	0/1:20,8:48:17,0,255
-chr21	8448628	chr21:8448628:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT	<7.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:26,28:107:255,0,255	0/1:22,29:173:255,0,255	0/0:33,0:209:0,198,255
-chr21	8449389	chr21:8449389:M	GGTGGGGTGGGGTG	<3.8>	.	.	Motif=GGTGG	GT:AD:DP:PL	0/1:1,1:4:9,0,17	0/1:2,0:4:4,0,23	0/1:2,3:6:36,0,18
-chr21	8449536	chr21:8449536:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTTCCTTCCTTCCTTCC	<16>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:32,27:96:255,0,255	0/1:36,31:104:255,0,255	0/0:164,16:209:0,255,255
-chr21	8449781	chr21:8449781:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:58,69:186:255,0,255	0/1:150,43:237:157,0,255	0/1:35,58:203:255,0,255
-chr21	8449827	chr21:8449827:M	TGTATCTATGTATGTATGTATGTATGT	<9.2>	.	.	Motif=TGTA	GT:AD:DP:PL	1/1:0,1:2:34,5,0	0/1:2,3:8:69,0,75	1/1:0,1:3:43,7,0
-chr21	8449996	chr21:8449996:M	TGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCT	<6.2>,<11.2>	.	.	Motif=TGCC	GT:AD:DP:PL	1/2:196,131,278:795:255,255,255,184,0,255	1/2:87,234,167:728:255,255,255,255,0,255	0/2:375,52,253:1090:255,255,255,0,255,255
-chr21	8450684	chr21:8450684:M	TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC	<13.7>	.	.	Motif=TCC	GT:AD:DP:PL	1/1:0,19:35:255,73,0	1/1:0,17:37:255,68,0	1/1:4,32:49:255,8,0
-chr21	8451682	chr21:8451682:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<14>,<17>	.	.	Motif=TC	GT:AD:DP:PL	1/2:14,508,30:654:255,255,196,255,0,255	1/2:34,142,150:424:255,255,255,255,0,255	1/2:8,533,25:724:255,255,255,255,0,255
-chr21	8452385	chr21:8452385:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<6.8>,<8.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:53,67,6:223:255,0,255,255,255,255	1/2:79,62,172:468:255,255,255,255,0,255	0/2:102,29,120:358:255,255,255,0,255,255
-chr21	8452413	chr21:8452413:M	TTTCTTTTTCTTTTTCT	<1.8>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/0:810,10:820:0,255,255	0/1:787,353:1140:255,0,255	0/0:934,198:1133:0,49,255
-chr21	8453237	chr21:8453237:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	<11.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:250,37:293:0,214,255	0/1:38,37:78:255,0,255	0/1:201,159:365:255,0,255
-chr21	8455277	chr21:8455277:M	TCTCTGTTCGTCTCTGTCTTTCTCTCTGTGTCTCTTTCTCTGTCTGTCTGTCTCTTTCTTTCTCTCTGTCTCTGTCTCTGTCTTTGTCTCTCTCTCT	<4.8>,<8.2>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/2:0,104,65:172:255,255,255,255,0,255	1/2:0,100,61:172:255,255,255,255,0,255	1/2:0,129,73:208:255,255,255,255,0,255
-chr21	8465015	chr21:8465015:M	GTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,24,1:60:255,0,22,255,50,255	1/2:9,24,54:121:255,255,255,165,0,173	1/1:0,46,1:56:255,148,0,255,130,255
-chr21	8466840	chr21:8466840:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:66,37:129:255,0,255	0/1:33,13:97:246,0,255	0/1:96,66:201:255,0,255
-chr21	8470659	chr21:8470659:M	CCCCCCCCCCCCCC	<11>	.	.	Motif=C	GT:AD:DP:PL	0/1:19,32:83:255,0,255	0/1:11,34:61:255,0,147	1/1:8,90:117:255,95,0
-chr21	8523526	chr21:8523526:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:23:130,0,119	0/1:22,10:32:69,0,255	0/0:40,1:59:0,153,255
-chr21	8527356	chr21:8527356:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,25:33:255,0,23	1/1:8,36:44:255,0,0	0/1:33,22:56:207,0,255
-chr21	8538019	chr21:8538019:M	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<11.8>	.	.	Motif=GAAG	GT:AD:DP:PL	0/0:3,0:4:0,0,39	0/1:5,3:10:25,0,57	0/0:13,1:17:0,11,192
-chr21	8539043	chr21:8539043:M	TGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:1,0:4:0,9,58	0/0:2,0:4:0,6,57	0/1:9,4:16:77,0,220
-chr21	8557646	chr21:8557646:M	TTTTTTTGTTTTGTTTTGTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:66,0,40	0/1:4,6:10:134,0,80	0/1:19,7:27:110,0,255
-chr21	8558574	chr21:8558574:M	GTGTGTGTCTGTGTGTGTGAGAGAGTGTGTGGTTTGTGTGT	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,4:23:2,0,235	0/1:19,7:27:36,0,228	0/0:34,5:39:0,32,255
-chr21	8558996	chr21:8558996:M	ATATATATATATATATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/0:28,0:30:0,87,255	0/1:20,7:27:36,0,250
-chr21	8580414	chr21:8580414:M	AGACAAGACAAGA	<1.6>	.	.	Motif=AGACA	GT:AD:DP:PL	0/1:17,5:22:73,0,255	0/0:29,1:30:0,62,255	0/1:29,11:40:179,0,255
-chr21	8582351	chr21:8582351:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:23:25,0,203	0/1:10,25:35:255,0,55	0/0:30,2:32:0,61,255
-chr21	8584854	chr21:8584854:M	GAAAGAAAGAAAGAAGGAAAGAAGGAAGGAAGGAAAAAAAAGAAAGAAAAGAAAGAAAGGAAAAGAAAAAAGAAAAGAAA	<19.8>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,2:3:20,6,0	1/1:0,3:4:21,7,0	0/0:2,0:2:0,4,14
-chr21	8584947	chr21:8584947:M	GAAGAAAGGAAGGAAGAAGGCAAGGGAAGGGAAGAGAAGAGAAAGGAAGATGGAAAGAAGGAAGGAAG	<12.5>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:7,3:10:46,0,142	0/0:10,0:10:0,30,250	0/0:19,1:20:0,36,255
-chr21	8590466	chr21:8590466:M	GGGGGGGGGGGGG	<11>,<12>	.	.	Motif=G	GT:AD:DP:PL	2/2:1,1,11:13:172,150,172,22,22,0	2/2:1,0,13:14:185,188,211,25,40,0	1/2:0,28,9:38:255,108,35,255,0,255
-chr21	8591042	chr21:8591042:M	TTCTTCCTCTTCCTTTCTCTTCTTCTT	<7.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:14,8:24:92,0,202	0/1:15,13:29:168,0,201	0/0:30,0:34:0,84,255
-chr21	8598361	chr21:8598361:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:0,9:11:123,0,0	0/1:4,11:21:161,0,65	0/1:16,5:23:21,0,227
-chr21	8600957	chr21:8600957:M	ATATACATATTGCAATATACATATA	<1.8>	.	.	Motif=ATATAC	GT:AD:DP:PL	0/0:14,1:15:0,18,255	0/1:23,4:27:26,0,255	0/1:18,7:25:108,0,255
-chr21	8618445	chr21:8618445:M	TATATATATAAAATATATATATATATATATA	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,12:13:167,22,0	0/1:1,0:2:6,0,9	0/1:6,5:11:43,0,58
-chr21	8643027	chr21:8643027:M	ATAGACAGATAGATAGATAGATAGATAGATAAGGTAGATAG	<11.2>	.	.	Motif=ATAG	GT:AD:DP:PL	.	.	1/1:0,6:8:110,18,0
-chr21	8651787	chr21:8651787:M	CCGCCGCGCCGCCGCTGTCCGCCTCTCCGCCGCGCCGCCGCTGTCCGCCTCTCCGCCGCGCCGCCGC	<5>	.	.	Motif=CCG	GT:AD:DP:PL	1/1:0,1:2:28,3,0	1/1:0,4:5:114,12,0	0/1:1,3:4:85,0,14
-chr21	8656862	chr21:8656862:M	GGCCGTGGCCGTGGCCCTGGCCCTGGCCCTGCCCAGGTCTTGGCACTGGCCTGGCCCTGCCCTGCCCTGGCCCT	<7.7>	.	.	Motif=GGCCCT	GT:AD:DP:PL	0/1:1,3:4:74,0,14	0/1:1,5:6:126,0,8	0/0:1,0:1:0,3,23
-chr21	8658750	chr21:8658750:M	AGGGTCAGGGCCAGGG	<22.5>	.	.	Motif=AGGGCC	GT:AD:DP:PL	0/0:16,0:16:0,48,255	0/0:23,0:23:0,69,255	0/1:7,4:11:15,0,147
-chr21	8659331	chr21:8659331:M	GGGCCAGGGCCAAGGCAGGGCCAG	<22.5>	.	.	Motif=GGGCCA	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/0:26,1:27:0,69,255	0/1:5,4:9:21,0,109
-chr21	8660483	chr21:8660483:M	GCCCCGCCCTACCCTGGCCTTGCCCTGCCCTGGCCCTGCC	<4.8>	.	.	Motif=GCCCT	GT:AD:DP:PL	0/1:7,1:9:1,0,161	0/1:7,4:11:67,0,156	0/1:1,1:3:19,0,18
-chr21	8661284	chr21:8661284:M	ATTTTTATTTTTA	<22.5>	.	.	Motif=ATTTTT	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:35,0:35:0,105,255	0/1:9,21:30:164,0,167
-chr21	8661972	chr21:8661972:M	CATTTCATTTCAT	<27>	.	.	Motif=CATTT	GT:AD:DP:PL	0/1:7,4:11:16,0,164	0/1:5,2:7:3,0,119	1/1:11,169:180:255,189,0
-chr21	8662029	chr21:8662029:M	TGAGATGAGATGAAATGACAAAATGATGAGATGAGATGAGATGATGAGATGA	<27>	.	.	Motif=TGAGA	GT:AD:DP:PL	0/1:4,2:6:7,0,89	0/1:1,3:4:25,0,15	0/1:1,7:8:62,0,4
-chr21	8662161	chr21:8662161:M	GAGATGAGATGAGTTAAAATGAGATGAAATGATGAGATGA	<3.8>,<27>	.	.	Motif=GAGAT	GT:AD:DP:PL	0/0:11,0,2:13:0,33,255,12,255,255	0/2:9,0,3:12:5,32,252,0,220,212	1/2:3,4,7:14:159,1,63,93,0,147
-chr21	8664794	chr21:8664794:M	GATGAGATGAGATTTGATGAAATGATGAGATGAAATGATGAGATGATATGAAATGATGAGATGAGATGGGATAAGATGAAATGA	<27>	.	.	Motif=GATGA	GT:AD:DP:PL	.	.	1/1:0,3:3:36,8,0
-chr21	8671550	chr21:8671550:M	CCCCACCCCAC	<2.4>	.	.	Motif=CCCCA	GT:AD:DP:PL	0/0:16,3:19:0,19,136	0/0:18,4:22:0,16,146	0/1:20,9:29:17,0,133
-chr21	8674134	chr21:8674134:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:80,9,0	1/1:0,6:6:158,18,0	0/1:10,2:14:13,0,247
-chr21	8681520	chr21:8681520:M	GGAAGGAGGAAGGAAGGAAGGAAGGAAGGAAGAAAAGGAAGGAAGGAAG	<14.2>	.	.	Motif=GGAA	GT:AD:DP:PL	0/1:2,0:3:6,0,34	0/1:1,0:3:20,0,12	0/1:12,12:26:190,0,182
-chr21	8682753	chr21:8682753:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,1,3	0/0:1,0:2:0,6,46	1/1:0,3:3:80,9,0
-chr21	8684339	chr21:8684339:M	TGTGCGTGTGTGTGTGGGTGTGTGCGTGTGTGCGTGTGTGTGTGTGTATGTATGTGTGTGTG	<13.5>	.	.	Motif=TGTG	GT:AD:DP:PL	0/1:6,4:11:59,0,109	0/1:7,3:11:53,0,126	0/1:12,5:19:92,0,218
-chr21	8684707	chr21:8684707:M	AAAATAAAATAAAA	<1.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:77,6:83:0,156,255	0/1:73,27:100:37,0,255	0/0:107,18:125:0,131,255
-chr21	8685216	chr21:8685216:M	GACAAAGACAAA	<2.2>	.	.	Motif=GACAAA	GT:AD:DP:PL	1/1:0,3:5:69,14,0	1/1:0,9:10:149,29,0	0/1:18,5:23:10,0,211
-chr21	8686014	chr21:8686014:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAA	<29>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:64,40,36,28,0,90	1/2:0,3,1:8:68,42,32,36,0,85	1/2:1,5,9:21:235,206,217,27,0,132
-chr21	8690190	chr21:8690190:M	AAAAAAAAAAAAAAAAAGAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,16,9:29:255,37,54,127,0,92	1/2:5,14,10:31:255,23,78,92,0,74	0/2:11,5,10:28:87,23,205,0,61,51
-chr21	8690516	chr21:8690516:M	TTTTTTCTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,3,22:29:255,196,224,46,31,0	1/2:3,12,13:34:235,33,125,51,0,49	0/2:12,3,32:54:255,239,255,0,146,51
-chr21	8690764	chr21:8690764:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10:20:219,0,151	0/1:6,8:18:165,0,150	0/1:18,5:28:61,0,255
-chr21	8691722	chr21:8691722:M	TATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATATATA	<21>,<25>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,3:4:128,101,96,12,9,0	.	1/1:0,4,0:5:157,12,0,149,12,144
-chr21	8695282	chr21:8695282:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,26,28:59:255,255,158,255,0,112	1/2:5,28,16:64:255,76,151,178,0,124	0/2:12,12,26:64:255,125,255,0,102,88
-chr21	8699297	chr21:8699297:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20:44:238,0,255	0/1:29,20:49:203,0,255	0/1:35,16:55:146,0,255
-chr21	8699702	chr21:8699702:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,13:29:70,146,255,0,123,82	0/2:6,2,4:14:15,21,92,0,20,51	0/1:34,13,4:51:2,0,255,94,231,255
-chr21	8700053	chr21:8700053:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,38:68:255,0,255	0/1:18,16:47:255,0,255	0/1:44,43:107:255,0,255
-chr21	8702753	chr21:8702753:M	TATATACATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:47,19:66:170,0,255	0/1:56,12:68:17,0,255	0/1:72,21:93:117,0,255
-chr21	8703149	chr21:8703149:M	TGTGTGTGTGTGTGTGTGTG	<8>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,62:79:255,0,110	0/1:23,49:78:255,0,255	0/1:40,55:100:255,0,255
-chr21	8703177	chr21:8703177:M	TATGTATGTGTGTGTGTGTGTATATATATATGTAT	<1.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:44,20:64:255,0,255	0/1:47,12:63:209,0,255	0/1:71,14:89:192,0,255
-chr21	8758717	chr21:8758717:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:44,11:56:97,0,255	0/1:27,14:50:204,0,255	0/1:38,9:51:86,0,255
-chr21	8777201	chr21:8777201:M	TTTTATTTTTAATTTTTTTTTTCTTTT	<4.3>	.	.	Motif=TTTTAT	GT:AD:DP:PL	1/1:6,47:53:255,63,0	1/1:0,34:34:255,98,0	1/1:11,54:65:255,23,0
-chr21	8782166	chr21:8782166:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	1/1:11,38:51:255,15,0	1/1:3,22:25:182,35,0	1/1:6,53:67:255,99,0
-chr21	8782187	chr21:8782187:M	TCTCTCTCTCTCTCT	<9.5>,<10.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,4,3:7:130,30,10,38,0,19	1/2:0,3,3:7:128,38,18,29,0,10	0/1:2,6,3:11:122,0,4,25,3,46
-chr21	8782201	chr21:8782201:M	TATATATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:21,18:39:79,0,108	0/1:6,9:15:50,0,20	0/1:26,28:58:168,0,106
-chr21	8784747	chr21:8784747:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,18:73:145,0,159	0/1:2,12:31:126,0,1	0/1:11,18:65:170,0,100
-chr21	8786414	chr21:8786414:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,26:74:239,0,255	0/1:26,25:51:255,0,255	0/1:50,24:74:196,0,255
-chr21	8788021	chr21:8788021:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGT	<20>,<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,17,10:41:49,0,88,64,8,213	1/2:3,5,7:19:48,32,71,31,0,69	0/1:10,21,7:43:105,0,37,145,17,255
-chr21	8788743	chr21:8788743:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,15:51:99,0,138	0/1:11,13:35:128,0,28	0/1:38,11:60:45,0,231
-chr21	8806868	chr21:8806868:M	GTGTGTGTGTGCGCGCGTGTGTGTGTGTGTGTGTGTTTGTGTGTGCGGTGTGTGTTTGTGTGTGTG	<22.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,3:12:35,0,186	0/0:13,1:14:0,16,255	0/0:9,1:10:0,7,200
-chr21	8812136	chr21:8812136:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,70:96:255,0,37	0/1:15,38:55:255,0,33	0/1:34,81:116:255,0,103
-chr21	8812543	chr21:8812543:M	TTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,7:28:156,0,255	0/1:13,2:20:34,0,255	0/1:32,4:55:54,0,255
-chr21	8813848	chr21:8813848:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:7:105,0,6	1/1:0,0:1:9,2,0	0/1:0,1:4:23,0,7
-chr21	8814065	chr21:8814065:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,7:43:29,0,95	0/1:7,8:26:39,0,35	0/1:26,14:51:27,0,125
-chr21	8814500	chr21:8814500:M	TTTCTTTTTTTTCTTTT	<3.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/0:25,7:32:0,15,171	0/1:14,6:20:6,0,82	0/0:38,9:47:0,34,255
-chr21	8815123	chr21:8815123:M	TTTTTTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,1:12:56,22,183,0,160,157	1/2:0,3,3:6:158,31,13,31,0,13	0/1:8,4,1:13:92,0,186,29,189,215
-chr21	8816400	chr21:8816400:M	AGGGTTAGGGTTAGGGGTTAGGGTTAGGGTCAGGGGTTAGTGGTCAGGTTCAGGGGTTAGGGATCAGGGTCAGGGGTTAGGGATCAGGGTCAGGTTCAGGG	<12.5>	.	.	Motif=AGGGTC	GT:AD:DP:PL	1/1:0,4:4:106,12,0	0/0:0,0:2:0,0,0	1/1:0,2:2:53,6,0
-chr21	8817239	chr21:8817239:M	TTCTTTTCTTTCTTGTTTTTTTTTTTTTTTC	<5.8>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:13,20:36:168,0,54	0/1:9,25:35:209,0,10	1/1:9,24:40:241,0,0
-chr21	8824095	chr21:8824095:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,3:19:0,13,175	0/1:10,5:15:24,0,91	0/0:29,5:34:0,29,255
-chr21	8828774	chr21:8828774:M	AAAAAAAAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,8:12:189,0,27	0/1:2,11:15:255,0,31	0/1:2,20:26:255,0,6
-chr21	8829420	chr21:8829420:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6:28:7,0,147	0/1:14,12:31:55,0,121	0/1:33,12:50:4,0,255
-chr21	8831799	chr21:8831799:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,14:23:134,0,44	0/1:5,18:26:176,0,15	0/1:18,11:31:60,0,177
-chr21	8836653	chr21:8836653:M	AAAAAAAAAAAAAAAAAAAAGAAAA	<21>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,6,1:29:138,0,255,178,122,255	0/2:6,1,4:15:1,11,224,0,42,39	0/1:9,9,1:25:231,0,183,253,69,255
-chr21	8847278	chr21:8847278:M	TTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,9:28:146,0,255	0/1:18,5:36:89,0,255	0/1:21,2:43:3,0,255
-chr21	8877314	chr21:8877314:M	TTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,6,1:22:87,0,118,94,72,228	0/2:2,0,5:9:88,100,158,0,26,15	0/2:7,0,4:15:39,75,236,0,120,130
-chr21	8988039	chr21:8988039:M	CCGTCCGCCCGTCCGCGGCCCGTCCGTCCGTCCGTCCGTCGTCC	<6.2>	.	.	Motif=CCGT	GT:AD:DP:PL	0/1:20,12:36:215,0,255	0/1:99,22:123:152,0,255	0/1:34,16:54:224,0,255
-chr21	8990385	chr21:8990385:M	GTCTGTCTGTCTGTCT	<4.5>,<5.5>	.	.	Motif=GTCT	GT:AD:DP:PL	1/2:16,53,26:95:255,45,7,251,0,255	1/2:0,53,29:96:255,255,29,255,0,255	0/2:30,29,32:91:255,49,224,0,149,255
-chr21	8990441	chr21:8990441:M	CACACCACACACACACACACACAGACACTCTCACACTCACACACAC	<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:17,71:136:255,72,0	1/1:0,88:107:255,255,0	0/1:27,40:112:255,0,162
-chr21	8993629	chr21:8993629:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:16,81,83:180:255,255,255,255,0,255	1/2:1,107,79:188:255,255,255,255,0,255	1/2:39,80,73:194:255,255,197,213,0,255
-chr21	8995570	chr21:8995570:M	ATATATATATATATATATATATATATATATATATATATATATAT	<4>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,57:91:255,175,0	1/1:0,80:96:255,227,0	1/1:0,79:101:255,170,0
-chr21	8995801	chr21:8995801:M	ATGGATATGGAT	<2.2>	.	.	Motif=ATGGAT	GT:AD:DP:PL	0/0:38,8:46:0,38,255	0/0:24,8:33:0,3,177	0/1:46,23:70:56,0,255
-chr21	8996039	chr21:8996039:M	AAAAAAAAAAAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:81,9,0	1/1:0,2:4:78,9,0	0/1:0,8:16:218,0,22
-chr21	8996071	chr21:8996071:M	GAAGGAAGGAAGGAAGGAAGGA	<6.5>,<9.5>,<10.5>	.	.	Motif=GAAG	GT:AD:DP:PL	1/3:0,3,0,8:14:208,179,166,96,62,106,37,0,69,66	2/3:0,0,9,5:18:255,255,255,37,20,0,74,52,0,51	1/3:0,14,0,18:36:255,255,255,250,133,255,123,0,255,255
-chr21	8997980	chr21:8997980:M	TATATATATATTCATATATACATATGCATATATATGTATAATATACATATATACATGCATACACATATATAATATACATATATATA	<30.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,8:40:167,0,192	0/1:2,8:22:186,0,24	0/1:11,4:35:64,0,251
-chr21	9002075	chr21:9002075:M	GTGGGGTGGGG	<1.8>	.	.	Motif=GTGGG	GT:AD:DP:PL	0/1:93,57:150:255,0,255	0/1:94,39:133:255,0,255	0/1:161,31:192:18,0,255
-chr21	9021106	chr21:9021106:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTGTGTGTTTGTGTGTGTGTG	<24>,<26>,<30>,<32>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,6,0,5,3:18:255,198,177,255,162,229,177,0,85,145,239,61,124,130,215	1/2:0,11,5,1,0:18:255,80,30,176,0,128,255,53,150,255,255,68,165,255,255	2/4:0,2,5,1,14:28:255,255,255,255,255,255,255,255,193,255,220,107,0,162,174
-chr21	9022114	chr21:9022114:M	TATATATATACACTTTATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,11:45:90,0,51	0/0:9,3:14:0,3,49	0/1:16,26:59:179,0,26
-chr21	9022146	chr21:9022146:M	TCTCTCTCTCTCTCTCTCTATCTCTCTCT	<13.5>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:5,15,9:40:170,32,4,158,0,255	1/2:1,1,7:12:64,54,56,8,0,85	1/1:4,26,9:65:255,52,0,255,63,255
-chr21	9025188	chr21:9025188:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,8:59:0,49,255	0/0:46,9:68:0,68,255	0/1:26,21:61:76,0,216
-chr21	9027842	chr21:9027842:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:37:255,58,0	1/1:0,23:38:255,83,0	1/1:0,41:55:255,127,0
-chr21	9028014	chr21:9028014:M	TTGTTTTTTTTTGTTTGTTTGTTT	<5.8>,<7.2>	.	.	Motif=TTGT	GT:AD:DP:PL	1/2:0,12,3:19:107,62,47,76,0,230	2/2:0,0,6:8:133,145,166,23,24,0	1/2:4,21,8:35:176,109,109,108,0,255
-chr21	9038074	chr21:9038074:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:206,22,0	1/1:0,1:1:17,3,0	1/1:1,15:19:255,37,0
-chr21	9038270	chr21:9038270:M	TTTTTTTTTTTTTT	<10>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:7,34,20:73:255,29,255,255,0,255	0/1:7,37,16:72:255,0,255,255,3,255	0/1:30,32,9:97:255,0,255,255,255,255
-chr21	9038689	chr21:9038689:M	TTTTTTTTTTTTT	<10>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3,5:21:26,0,255,15,51,87	1/2:1,5,4:12:124,31,107,96,0,100	0/1:29,8,2:40:91,0,255,158,255,255
-chr21	9038885	chr21:9038885:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:164,27,0	0/1:1,0:2:5,0,12	1/1:1,15:16:249,29,0
-chr21	9039487	chr21:9039487:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,18:41:255,0,255	1/1:0,31:45:255,92,0	0/1:27,32:68:255,0,255
-chr21	9040283	chr21:9040283:M	TTTTTTTTTTTTTCTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,16:44:255,126,47,255,0,151	1/1:0,17,0:25:255,66,0,255,59,219	1/2:0,38,26:67:255,202,84,255,0,218
-chr21	9041099	chr21:9041099:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:28:71,0,230	1/1:0,7:11:125,11,0	0/1:21,19:43:228,0,255
-chr21	9041504	chr21:9041504:M	ATATATATATATATATATATATAT	<7.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:9,1,4:20:57,37,255,0,161,138	0/2:6,1,3:12:49,24,172,0,109,96	0/1:13,9,1:29:158,0,255,92,226,255
-chr21	9041527	chr21:9041527:M	TTTTTTTTTTTTTTTT	<11>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,8,2:14:168,0,62,140,38,210	1/2:0,4,3:9:165,80,71,89,0,74	1/1:0,23,0:24:255,56,0,255,69,255
-chr21	9042403	chr21:9042403:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,49:82:255,0,129	0/1:56,31:98:99,0,255	0/1:55,44:109:210,0,255
-chr21	9042798	chr21:9042798:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,20:36:187,0,64	0/1:15,17:32:123,0,98	0/1:10,29:41:253,0,34
-chr21	9044096	chr21:9044096:M	AGGGTTAGGGTTAGGGGTTAGGGTTAGGGTCAGGGGTTAGGGGTCAGGGGTTAGGGGTCAGGGTCAGGGGTCAGGGTCAGGTTCAGGG	<5.8>	.	.	Motif=AGGGTC	GT:AD:DP:PL	1/1:0,21:22:255,65,0	1/1:0,18:19:255,54,0	1/1:1,22:23:255,47,0
-chr21	9045179	chr21:9045179:M	TTGTTGTTGTTGTTGTT	<6.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:46,21:67:53,0,255	0/1:23,14:38:51,0,160	0/0:46,10:59:0,41,255
-chr21	9053749	chr21:9053749:M	ACACACACACACACACACACACACATACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:21,4:27:0,7,248	0/1:6,7:14:70,0,45	0/1:31,8:49:66,0,255
-chr21	9057942	chr21:9057942:M	AAAAAAAGAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,2:11:0,8,72	0/0:17,2:19:0,29,152	0/1:25,10:35:11,0,165
-chr21	9072878	chr21:9072878:M	GGAGGAGGAGAGGAG	<4>	.	.	Motif=GGA	GT:AD:DP:PL	0/1:24,10:34:80,0,255	0/1:4,7:11:87,0,36	0/1:36,14:50:100,0,255
-chr21	9078248	chr21:9078248:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:13,21,18:52:255,22,233,102,0,125	1/2:0,15,20:35:255,198,153,187,0,91	0/1:24,56,5:86:255,0,255,255,235,255
-chr21	9084568	chr21:9084568:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTG	<20.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:21,1,0:29:64,0,255,128,246,255	1/2:1,3,3:8:85,24,72,67,0,84	0/1:11,3,1:17:53,0,218,80,116,190
-chr21	9088788	chr21:9088788:M	TATGTATGTATGTAT	<1.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:8,0:8:0,24,222	.	0/1:2,4:6:91,0,37
-chr21	9088851	chr21:9088851:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:33:168,0,183	0/1:4,13:17:156,0,14	0/1:12,21:33:244,0,98
-chr21	9105777	chr21:9105777:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,62,0	.	1/1:1,15:16:246,29,0
-chr21	9106908	chr21:9106908:M	ACACACACACACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,11:48:160,0,255	0/1:10,15:39:212,0,207	0/1:23,7:43:93,0,255
-chr21	9107926	chr21:9107926:M	TATATATATAT	<3.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:26,1:27:0,59,255	0/1:6,3:9:38,0,102	0/0:44,2:47:0,96,255
-chr21	9110203	chr21:9110203:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:22:0,15,104	1/1:0,4:13:55,15,0	0/0:14,2:29:0,41,203
-chr21	9115662	chr21:9115662:M	AAAAAAAAAAAGAAAAGAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,18:36:227,0,216	1/1:0,18:18:255,53,0	0/1:20,26:47:255,0,238
-chr21	9117865	chr21:9117865:M	AAAAAAAAAAAAATAAAAATAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,12:37:214,0,255	0/1:7,19:27:255,0,122	0/1:41,19:61:255,0,255
-chr21	9121382	chr21:9121382:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:14:13,0,255	1/1:0,5:5:136,15,0	0/1:12,4:17:57,0,255
-chr21	9121528	chr21:9121528:M	AAAAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5,11:31:54,0,255,0,15,59	0/2:3,2,6:17:32,20,203,0,11,23	0/1:18,19,7:47:255,0,255,255,107,255
-chr21	9121942	chr21:9121942:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,18:51:82,0,255	0/1:5,19:27:156,0,18	0/1:36,27:68:155,0,255
-chr21	9124831	chr21:9124831:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:21:65,0,54	1/1:2,7:9:54,2,0	0/0:16,5:21:0,1,121
-chr21	9133336	chr21:9133336:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:5,0,100	0/0:6,0:6:0,16,72	0/0:5,0:8:0,18,77
-chr21	9134281	chr21:9134281:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,25:38:255,0,106	0/1:8,18:26:222,0,56	0/1:31,18:49:162,0,255
-chr21	9134732	chr21:9134732:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:53,20:76:34,0,255	0/1:44,18:65:38,0,255	0/1:72,30:103:77,0,255
-chr21	9134891	chr21:9134891:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,3:25:3,0,255	0/1:4,5:9:102,0,77	0/1:19,9:28:149,0,255
-chr21	9144154	chr21:9144154:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,7,17:42:73,88,255,0,45,142	1/2:1,4,7:12:73,62,108,31,0,48	0/2:18,6,11:35:25,53,255,0,87,159
-chr21	9148728	chr21:9148728:M	AAAAAGAAAAAGGAAAAAAAAAG	<3.7>	.	.	Motif=AAAAAG	GT:AD:DP:PL	0/1:11,20:31:187,0,64	0/1:7,3:10:13,0,68	0/1:11,13:24:111,0,83
-chr21	9149056	chr21:9149056:M	TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTATGTGTGTG	<19>	.	.	Motif=TG	GT:AD:DP:PL	0/0:37,0:39:0,84,255	1/1:1,9:13:105,20,0	0/0:25,4:31:0,26,231
-chr21	9151857	chr21:9151857:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,14:16:135,21,0	1/1:0,0:1:10,3,0	0/1:4,6:12:52,0,13
-chr21	9166200	chr21:9166200:M	TTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,7:15:151,0,159	1/1:0,6:8:153,7,0	0/1:12,4:21:49,0,255
-chr21	9181896	chr21:9181896:M	GTGTGTGTGTATGTGTGTTTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<27>	.	.	Motif=GT	GT:AD:DP:PL	0/1:30,26:61:76,0,141	0/0:19,8:34:0,14,146	0/1:29,16:51:25,0,151
-chr21	9192914	chr21:9192914:M	AAAAAAAAGGAAAAAAGAAAAAGAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,6:19:112,0,255	0/1:6,4:10:83,0,118	0/1:35,5:41:17,0,255
-chr21	9193067	chr21:9193067:M	TCTCTCTCTCTCTCTCT	<7.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:41,2:44:0,86,255	0/1:16,8:27:34,0,134	0/0:73,3:79:0,165,255
-chr21	9246106	chr21:9246106:M	GAATGGAATGGAATGGAGTGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	1/1:43,549:592:255,255,0	1/1:65,608:673:255,118,0	0/1:68,558:626:255,0,83
-chr21	9246379	chr21:9246379:M	GGAATGGAATGGAAT	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:165,576:759:255,0,255	0/1:176,629:822:255,0,255	0/1:141,588:755:255,0,255
-chr21	9246463	chr21:9246463:M	GAATGGAATTGAATAGAGTGGAATGAAATGGA	<27>	.	.	Motif=GAATG	GT:AD:DP:PL	0/1:135,587:725:255,0,255	0/1:135,645:789:255,0,255	0/1:118,601:727:255,0,255
-chr21	9247746	chr21:9247746:M	AGTGGAGTGGGATGGAGTG	<27>	.	.	Motif=AGTGG	GT:AD:DP:PL	0/1:252,125:377:255,0,255	0/1:260,148:408:255,0,255	0/1:250,150:400:255,0,255
-chr21	9247991	chr21:9247991:M	GGAATGGAATTGAATGGAGGGGAATGGAATGGGATGGA	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:256,367:639:255,0,255	0/1:213,377:612:255,0,255	0/1:213,374:600:255,0,255
-chr21	9248680	chr21:9248680:M	GGAATGGAACGGATTAGAGTGGAATGGAATGGA	<27>	.	.	Motif=GGAAT	GT:AD:DP:PL	0/1:89,266:356:255,0,255	0/1:109,277:386:255,0,255	0/1:96,259:355:255,0,255
-chr21	9254015	chr21:9254015:M	TTTGTGTGTGTGTTTGTTTTTTTTTGT	<7.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:1,37:41:255,95,0	0/0:15,0:16:0,44,255	1/1:0,25:32:255,75,0
-chr21	9254039	chr21:9254039:M	TGTGTGTGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,3:9:8,0,142	0/0:24,0:24:0,72,255	0/0:10,2:13:0,14,255
-chr21	9281359	chr21:9281359:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,15:27:255,0,75	0/1:10,7:25:110,0,161	0/1:13,14:45:255,0,180
-chr21	9293315	chr21:9293315:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAA	<8.5>,<11.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,12,5:17:255,63,84,255,0,255	0/1:8,3,1:12:33,0,164,50,85,132	0/1:10,4,0:15:51,0,192,85,123,192
-chr21	9305750	chr21:9305750:M	CACACACACACACACACACACACACACACACACACACAC	<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,21:69:103,0,6	0/1:27,9:74:21,0,98	0/1:12,17:98:38,0,111
-chr21	9306079	chr21:9306079:M	TATATATATATATATATATATATTTATATTTATATTTATATATTTATATTTATATTT	<9.2>,<10.2>	.	.	Motif=TATATT	GT:AD:DP:PL	1/2:1,7,4:15:68,38,34,48,0,106	0/2:0,0,1:2:8,11,17,0,4,2	1/1:3,15,0:19:78,19,0,127,53,255
-chr21	9317326	chr21:9317326:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:51,17:68:77,0,255	0/1:53,17:73:58,0,255	0/0:83,7:90:0,150,255
-chr21	9321493	chr21:9321493:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:11:154,15,0	0/1:22,6:28:17,0,255	1/1:1,20:22:255,38,0
-chr21	9324658	chr21:9324658:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<34>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:80,18,9,57,0,50	1/2:1,2,3:7:84,33,46,31,0,37	1/1:0,6,0:6:143,18,0,132,18,124
-chr21	9332490	chr21:9332490:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:67,10:78:0,87,255	0/1:63,22:86:45,0,255	0/0:111,1:122:0,255,255
-chr21	9333366	chr21:9333366:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:58,61:124:255,0,253	0/1:101,39:145:16,0,255	0/1:49,53:110:255,0,193
-chr21	9345622	chr21:9345622:M	TTTTCATTTTTTTTCCTTTTCTTTTCTTTTCTTTTTTTTTACTTT	<8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:67,37:105:255,0,255	0/1:73,65:141:255,0,255	0/1:104,44:150:255,0,255
-chr21	9352683	chr21:9352683:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:15:130,0,110	0/1:3,7:16:160,0,75	0/0:3,0:4:0,2,72
-chr21	9354167	chr21:9354167:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,15:38:255,0,122	0/1:20,14:43:255,0,255	0/1:15,14:38:255,0,255
-chr21	9355327	chr21:9355327:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:44,87:143:255,0,146	0/1:61,96:165:255,0,255	0/1:108,26:148:47,0,255
-chr21	9356028	chr21:9356028:M	TCTCTCTCTCTCTCTCTCTCT	<12.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:15,1:19:0,31,255	0/0:31,0:47:0,121,255	0/1:27,16:53:146,0,255
-chr21	9357476	chr21:9357476:M	AAAAAAAAAGAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:182,53:250:0,22,255	0/0:182,29:239:0,103,255	0/1:147,61:228:147,0,255
-chr21	9357529	chr21:9357529:M	TTTTTTGTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:100,87:232:255,0,255	0/1:133,54:224:106,0,255	0/1:85,56:187:201,0,255
-chr21	9373555	chr21:9373555:M	AAAAAAAAGAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,11:40:176,0,255	0/0:72,0:73:0,216,255	0/1:13,26:42:255,0,229
-chr21	9376219	chr21:9376219:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16.5>,<17.5>,<18.5>	.	.	Motif=TC	GT:AD:DP:PL	0/3:3,1,2,10:20:255,183,167,81,96,89,0,17,35,43	2/3:1,0,5,4:13:116,72,65,10,21,7,15,20,0,23	1/3:6,8,0,2:20:64,13,21,22,27,95,4,0,104,176
-chr21	9376249	chr21:9376249:M	TATATATATATATATATATATATATATA	<12.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,8,10:27:242,134,128,98,0,44	1/2:0,4,2:10:98,23,7,63,0,47	2/2:0,0,13:39:255,255,255,77,95,0
-chr21	9527280	chr21:9527280:M	TTTTTTTTTTTTTT	<12>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9,6:25:120,0,235,114,42,219	0/1:15,5,1:22:58,0,255,100,149,245	1/2:10,9,16:35:159,69,255,70,0,151
-chr21	9527753	chr21:9527753:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,21:26:255,13,0	0/1:10,27:39:255,0,48	0/1:8,15:24:159,0,63
-chr21	9536364	chr21:9536364:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:42,9:54:47,0,255	0/0:61,0:63:0,182,255	0/1:30,23:57:255,0,255
-chr21	9538526	chr21:9538526:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,2:30:0,55,255	0/1:13,9:22:77,0,140	0/0:19,3:23:0,19,255
-chr21	9538915	chr21:9538915:M	TTTTTTATTTCTTTCTTTTTCTTTTCTTTTTTTTTTCTTTCTTTTTTTTTTTTTTTT	<54>,<56>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,0,5:14:29,70,255,0,125,84	1/2:1,3,5:9:109,52,111,54,0,46	2/2:4,0,13:20:154,177,255,1,50,0
-chr21	9541066	chr21:9541066:M	TGTGTGTGTGTGAGTGTGCGTATGTGTGTGCGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,6:23:12,0,152	0/0:23,0:23:0,64,255	0/1:14,8:22:39,0,115
-chr21	9541916	chr21:9541916:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,5:29:0,24,196	0/0:22,2:25:0,45,213	0/1:12,13:28:89,0,50
-chr21	9544220	chr21:9544220:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,3,17:38:255,151,213,0,123,206	0/1:11,12,7:32:100,0,44,26,57,209	0/2:31,11,13:56:116,30,201,0,216,255
-chr21	9544541	chr21:9544541:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5:19:19,0,105	0/1:8,7:16:40,0,63	0/1:18,8:27:23,0,155
-chr21	9545072	chr21:9545072:M	GGGGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/1:25,11:43:5,0,174	0/0:12,0:20:0,49,173	0/1:21,22:51:100,0,109
-chr21	9546124	chr21:9546124:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,2,0:10:28,0,97,26,62,69	0/2:11,1,7:20:36,38,216,0,91,59	0/1:6,13,2:23:222,0,56,124,38,128
-chr21	9546599	chr21:9546599:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,4:18:9,0,163	0/0:9,0:11:0,31,154	0/1:17,6:23:24,0,191
-chr21	9547958	chr21:9547958:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:20:30,0,133	0/0:12,1:15:0,28,174	0/1:11,7:19:57,0,101
-chr21	9553153	chr21:9553153:M	TTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,13:20:255,0,77	0/1:0,7:11:163,0,5	0/1:5,4:12:80,0,121
-chr21	9554815	chr21:9554815:M	TTTTTTTTTTTGTTTTTTGTTTTTTTTT	<30>,<31>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,15:30:255,231,146,206,0,120	1/1:0,5,0:5:130,15,0,85,14,71	2/2:0,0,6:6:169,104,87,18,17,0
-chr21	9555114	chr21:9555114:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,20:28:182,0,1	0/1:9,9:18:60,0,60	0/1:4,2:8:24,0,28
-chr21	9568146	chr21:9568146:M	GATGATGATGATG	<5.3>	.	.	Motif=GAT	GT:AD:DP:PL	0/1:19,6:25:3,0,156	0/1:12,7:19:30,0,87	0/0:50,8:58:0,63,255
-chr21	9568474	chr21:9568474:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,13:55:0,9,255	0/0:50,11:61:0,47,255	0/1:32,23:56:91,0,193
-chr21	9576101	chr21:9576101:M	TTTATTTTATTT	<2.2>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/1:38,29:72:128,0,212	0/0:48,14:72:0,8,255	0/1:64,42:106:155,0,255
-chr21	9579077	chr21:9579077:M	TATATATATATATCATAT	<8>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:2,5,4:13:55,12,8,47,0,202	0/1:3,3,2:9:20,0,10,23,14,148	0/0:27,2,1:31:0,48,226,81,255,255
-chr21	9590868	chr21:9590868:M	CTTTTCCTTTTCTTTTTCTTTTTTTTTTTTTTTT	<6.4>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:6,0:6:0,16,61	0/0:2,0:5:0,6,22	1/1:0,6:6:61,16,0
-chr21	9592383	chr21:9592383:M	ACACACACACACACACACACTCACACAGAGACACACACACA	<17.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,9:20:78,122,255,0,134,78	0/0:13,0,3:16:0,47,255,6,177,131	1/2:0,7,21:28:255,255,255,166,0,93
-chr21	9592922	chr21:9592922:M	TTTTTTTTTTATTTTTTATTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:3:0,3,12	1/1:0,1:2:30,3,0	1/1:1,14:15:255,14,0
-chr21	9593108	chr21:9593108:M	TTTTATTTTACTTTTTTTTTTTATT	<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,11:11:97,27,0	1/1:2,16:18:123,27,0	0/0:18,5:23:0,13,114
-chr21	9604526	chr21:9604526:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:1,0,68	0/1:2,3:6:18,0,11	0/0:18,0:18:0,48,200
-chr21	9607114	chr21:9607114:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,1:10:0,16,93	0/1:7,3:11:5,0,60	0/0:25,6:31:0,15,219
-chr21	9610522	chr21:9610522:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:12:0,31,114	0/1:8,6:15:18,0,46	0/0:11,2:16:0,19,103
-chr21	9619746	chr21:9619746:M	TTATTATAATTATTAT	<4.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:30,9:39:57,0,255	0/1:24,11:35:95,0,255	0/0:36,0:36:0,106,255
-chr21	9626221	chr21:9626221:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:48,22:73:141,0,255	1/1:1,12:13:169,22,0	0/0:29,5:35:0,23,255
-chr21	9629089	chr21:9629089:M	ATATACATATATATATAGTATATAT	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:57,0:57:0,164,255	0/1:10,5:15:32,0,106	0/0:49,0:49:0,141,255
-chr21	9657308	chr21:9657308:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,5,0,1:9:102,34,60,78,58,86,85,0,46,123	1/3:0,6,0,6:15:186,116,178,166,171,200,101,0,54,134	2/3:0,1,3,0:6:54,41,42,30,24,23,37,18,0,83
-chr21	9662361	chr21:9662361:M	TTTTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:17,0,12:30:37,121,255,0,181,94	0/0:13,0,1:16:0,29,255,13,135,94	1/2:7,19,7:37:255,3,141,255,0,255
-chr21	9666845	chr21:9666845:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,0,21:36:255,255,255,0,214,113	1/2:1,21,10:36:255,151,200,255,0,255	0/2:21,0,16:50:143,255,255,0,255,255
-chr21	9680860	chr21:9680860:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:15,0:15:0,42,197	0/1:12,18:30:147,0,70	0/0:20,0:23:0,58,255
-chr21	9694961	chr21:9694961:M	ATATATATGTCTATATATATATATACATAT	<14>	.	.	Motif=AT	GT:AD:DP:PL	0/1:11,35:46:255,0,74	0/1:40,16:56:123,0,255	0/1:16,40:56:255,0,133
-chr21	9709049	chr21:9709049:M	GTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:0,0:1:0,0,0	1/1:1,16:17:208,34,0	1/1:0,4:5:70,14,0
-chr21	9709123	chr21:9709123:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:17,6:23:90,0,255	0/0:14,0:14:0,42,255	0/1:10,6:17:111,0,219
-chr21	9709864	chr21:9709864:M	AATAATAATAATAATAAT	<7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:31,0:31:0,88,255	0/0:4,0:5:0,1,42	0/1:11,5:17:22,0,120
-chr21	9709882	chr21:9709882:M	TATATATATATATATATATA	<4.5>,<9>,<11>	.	.	Motif=TA	GT:AD:DP:PL	0/3:10,0,0,15:26:82,159,255,139,255,255,0,114,70,39	2/3:0,0,6,4:11:75,106,255,43,88,60,54,113,0,82	0/1:6,11,0,0:19:255,0,123,255,50,255,255,64,255,255
-chr21	9709901	chr21:9709901:M	AGAGAGAGAGAGAGAGAGA	<11.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,10:34:162,0,242	0/0:15,0:16:0,44,255	0/1:12,5:24:68,0,203
-chr21	9712972	chr21:9712972:M	ACACACACACACACACACACACACACACAC	<13>,<14>,<16>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,3,0,11:16:151,114,255,154,234,242,64,0,41,57	0/2:20,0,9,5:34:10,84,255,0,255,186,45,255,119,255	1/3:2,9,0,14:25:255,136,255,231,255,255,164,0,96,183
-chr21	9722805	chr21:9722805:M	AACAACAACAACAACAACAACAA	<5.7>,<9.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/2:0,20,40:66:255,255,255,255,0,255	0/2:40,11,15:74:202,198,255,0,255,255	0/2:37,0,22:62:255,255,255,0,255,255
-chr21	9724209	chr21:9724209:M	ACACACACACACACACACACACACACACACACACACAC	<16>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,16,15:52:255,12,239,124,0,121	0/1:12,21,10:61:255,0,217,255,15,246	0/1:11,13,0:54:163,0,255,170,235,255
-chr21	9727768	chr21:9727768:M	AAAAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,25:35:255,255,255,76,95,0	0/2:9,13,8:46:111,95,209,0,13,255	0/2:14,1,11:41:205,255,255,0,161,255
-chr21	9742111	chr21:9742111:M	AAGTGAAGTGA	<2.4>	.	.	Motif=AAGTG	GT:AD:DP:PL	1/1:17,72:89:255,79,0	0/0:79,29:108:0,38,255	0/0:75,31:106:0,19,255
-chr21	9746229	chr21:9746229:M	TTTTTTTTTTTTTTTTTT	<16>,<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:7,7,25,8:48:171,103,255,6,65,16,218,152,0,255	2/3:5,2,11,8:27:79,76,245,27,110,70,76,76,0,164	1/2:5,14,28,1:50:255,123,172,69,0,7,255,215,104,255
-chr21	9746593	chr21:9746593:M	GTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,59:76:255,0,225	0/1:27,81:109:255,0,255	0/1:23,75:101:255,0,255
-chr21	9755719	chr21:9755719:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:52,30:84:204,0,255	0/1:23,41:65:255,0,138	0/1:24,40:82:255,0,255
-chr21	9761944	chr21:9761944:M	TGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,12,8:38:255,0,255,92,255,255	0/2:10,6,15:34:255,118,255,0,163,206	0/1:16,19,7:58:255,0,255,213,255,255
-chr21	9764569	chr21:9764569:M	CACACACACACACACACACACACACCACACACACA	<19.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:14,13,14:52:255,196,255,0,47,255	0/2:13,14,16:59:255,156,240,0,20,255	1/2:14,28,9:62:255,24,96,156,0,255
-chr21	9765079	chr21:9765079:M	TATATATATATATATATATATATATATATATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,34:58:255,0,141	1/1:0,20:23:255,58,0	0/1:0,18:31:255,0,2
-chr21	9775731	chr21:9775731:M	TTTCTTTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<10.2>,<15.5>,<16.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,7,7,2:31:255,226,255,178,0,148,215,60,141,211	1/3:0,20,5,6:50:255,255,255,255,21,255,255,0,255,255	2/3:0,0,11,9:36:255,255,255,111,138,32,128,191,0,92
-chr21	9775782	chr21:9775782:M	TTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,6:55:8,0,255	0/1:38,9:49:111,0,255	0/1:47,29:78:255,0,255
-chr21	9785414	chr21:9785414:M	TTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3,0:6:57,50,120,0,71,59,49,70,26,61	2/3:2,0,2,3:9:55,64,172,12,87,64,18,35,0,14	1/3:1,4,2,3:16:164,39,124,75,45,106,117,0,59,109
-chr21	9791326	chr21:9791326:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,83:107:255,0,77	1/1:16,91:107:255,55,0	0/1:38,51:90:255,0,255
-chr21	9794599	chr21:9794599:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:12,27,14:54:255,1,97,144,0,119	1/2:9,19,30:58:255,126,202,89,0,26	1/1:7,40,0:49:255,20,0,255,61,255
-chr21	9794759	chr21:9794759:M	AAAAAAAAAATAAAAAAAAAAAAAA	<14>,<16>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,2,2,10:36:255,89,220,218,227,255,252,0,129,222	1/3:0,13,3,4:30:255,37,48,208,49,229,255,0,171,255	0/2:4,0,6,1:20:137,60,185,0,119,126,130,73,14,145
-chr21	9794783	chr21:9794783:M	ATATATATATATATATATATACATATATA	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,4:23:60,0,183	0/1:4,5:9:92,0,72	0/1:6,6:21:112,0,124
-chr21	9820677	chr21:9820677:M	ACACACACACAGACACACACACACACACACACACACACAC	<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	0/2:39,88,81:268:255,107,61,0,14,255	0/1:44,89,39:234:255,0,75,153,240,255	0/2:24,35,41:185:255,105,255,0,255,255
-chr21	9823502	chr21:9823502:M	AGACACACACACAGACACA	<2.8>	.	.	Motif=AGACAC	GT:AD:DP:PL	0/1:127,61:188:232,0,255	0/0:188,54:242:0,3,255	0/1:100,46:148:163,0,255
-chr21	9827726	chr21:9827726:M	ACACACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,22:43:92,0,24	0/0:23,10:42:0,20,152	1/1:6,17:33:125,17,0
-chr21	9833357	chr21:9833357:M	ACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,13:17:193,0,9	0/1:13,15:31:203,0,178	0/1:2,10:13:151,0,2
-chr21	9837570	chr21:9837570:M	ACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,2:15:50,0,246	0/1:9,6:15:142,0,193	0/1:12,7:19:149,0,255
-chr21	9838981	chr21:9838981:M	ACACAGACACACTCACACACACACACACACACACACACA	<18.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:20,8,12:40:99,121,255,0,104,255	0/2:31,1,7:43:8,87,255,0,252,255	1/2:16,16,12:49:105,51,173,21,0,255
-chr21	9851709	chr21:9851709:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,20:27:255,0,6	0/1:8,6:16:71,0,111	0/1:9,5:17:78,0,124
-chr21	9854366	chr21:9854366:M	TTTGTTTGTTTTTTTG	<5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:35,79:116:255,0,91	1/1:20,84:104:255,61,0	0/1:56,62:119:255,0,255
-chr21	9855936	chr21:9855936:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:53,36:90:223,0,255	0/1:65,19:84:11,0,255	0/1:36,54:90:255,0,219
-chr21	9858104	chr21:9858104:M	ATATATATATATATATATATATATATATATATATATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,31:37:255,109,0	1/1:0,21:22:255,66,0
-chr21	9873956	chr21:9873956:M	AAACAAACAAACAAACAAACAAACAAACAAAC	<7>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:14,91:106:255,119,0	1/1:17,95:112:255,102,0	1/1:20,105:126:255,101,0
-chr21	9874574	chr21:9874574:M	CACACACACACACACACACACACACACACACACACACACACACACACACACA	<19>,<21>,<23>,<24>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,8,7,4:19:255,255,255,128,161,110,116,96,0,63,198,138,19,78,151	3/4:0,0,0,8,9:19:255,255,255,236,255,255,73,64,59,23,81,64,50,0,29	0/1:3,7,4,0,0:18:214,0,83,43,55,125,177,79,133,243,208,56,101,231,247
-chr21	9878731	chr21:9878731:M	TTTTTTTCTTTTTCTTTTTTTTTTCTTTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,20,24:53:255,214,108,178,0,71	2/2:0,0,24:33:255,255,231,74,65,0	1/2:0,21,38:61:255,255,193,226,0,48
-chr21	9878921	chr21:9878921:M	TTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:16,30,7:64:255,93,187,161,0,255	1/2:0,32,28:65:255,255,255,255,0,255	0/1:40,36,2:78:179,0,237,255,255,255
-chr21	9884757	chr21:9884757:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,17:45:70,0,48	0/1:0,11:19:49,0,2	1/1:5,27:46:198,39,0
-chr21	9884923	chr21:9884923:M	AAAATAAAATAAAATAAA	<2.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:56,20:76:255,0,255	0/1:29,11:40:188,0,255	0/0:75,0:75:0,225,255
-chr21	9888581	chr21:9888581:M	TTTTTCTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,11:33:10,0,94	0/1:15,10:36:12,0,95	0/0:33,1:40:0,75,255
-chr21	9893417	chr21:9893417:M	ACACACACACACACACACACACACGCCACACAC	<14.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,29,15:89:255,0,236,255,53,255	1/2:18,29,25:85:197,22,255,218,0,255	1/1:1,28,0:98:255,159,0,255,153,255
-chr21	9894712	chr21:9894712:M	AAAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,39,15:74:255,0,255,229,180,255	1/1:9,69,3:82:255,2,0,255,102,255	1/2:0,63,47:110:255,255,166,255,0,255
-chr21	9907030	chr21:9907030:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,26:69:100,0,139	0/1:22,23:61:92,0,145	0/1:11,16:46:59,0,96
-chr21	9908432	chr21:9908432:M	ATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTA	<9>,<11>,<15>	.	.	Motif=ATCT	GT:AD:DP:PL	1/3:0,31,15,15:70:255,255,255,255,250,255,255,0,248,255	1/2:0,27,22,0:63:255,255,232,255,0,255,255,162,239,255	1/3:0,21,0,15:53:255,255,255,255,255,255,255,0,255,255
-chr21	9917528	chr21:9917528:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:5,37,9:52:255,37,38,255,0,255	1/2:1,25,17:44:255,146,203,231,0,255	0/1:20,22,2:46:121,0,101,219,139,255
-chr21	9923070	chr21:9923070:M	ACACACACACACACACACACACACA	<8.5>,<10.5>,<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:25,23,15,13:77:255,0,255,178,254,255,255,14,255,255	0/3:31,0,23,34:89:255,255,255,51,255,255,0,255,103,129	1/3:1,19,31,23:95:255,255,255,37,38,243,255,0,50,255
-chr21	9932468	chr21:9932468:M	AAAAAAACAAACAAACAAACAAAAAAAAACAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/1:65,16:81:123,0,255	0/1:62,13:75:68,0,255	0/1:33,53:86:255,0,255
-chr21	9939035	chr21:9939035:M	ATATATATGTTATTATATATGTTATATATATATATATAATATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:35,9:44:112,0,255	0/1:19,14:33:255,0,255	0/1:17,36:53:255,0,255
-chr21	9948821	chr21:9948821:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,5:50:0,21,255	0/0:42,0:58:0,130,255	0/1:36,14:52:208,0,255
-chr21	9949904	chr21:9949904:M	AAAATAAAATAAAA	<3.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:53,65:118:255,0,255	0/1:45,75:120:255,0,255	0/1:75,63:138:255,0,255
-chr21	9956781	chr21:9956781:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:42,23:85:177,0,255	0/1:20,27:61:255,0,113	0/1:62,47:115:255,0,255
-chr21	9963353	chr21:9963353:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:41,29:73:130,0,255	0/1:28,43:73:255,0,104	0/0:56,5:70:0,125,255
-chr21	9969989	chr21:9969989:M	TGTGTGCGTGTATGTGTGTGTGTGTGT	<12.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:37,16,18:90:255,255,255,0,222,255	1/2:20,31,19:78:255,228,255,128,0,255	0/2:33,1,34:69:255,255,255,0,255,255
-chr21	9984660	chr21:9984660:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,57:86:255,0,204	1/1:15,82:98:255,54,0	0/1:25,82:108:255,0,77
-chr21	9989193	chr21:9989193:M	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTGTCTCCCTCTCTCTCTCT	<26.5>,<27.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:8,11,3:26:173,0,98,91,51,113	1/2:0,11,10:25:255,79,41,127,0,69	0/0:10,0,1:18:0,30,195,19,119,91
-chr21	9992425	chr21:9992425:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:33,17:55:74,0,247	0/1:31,11:45:20,0,235	0/1:37,16:59:23,0,255
-chr21	9994453	chr21:9994453:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3,4:25:101,0,184,19,112,115	1/2:2,13,6:36:255,31,3,152,0,102	1/2:1,9,5:20:255,31,22,72,0,39
-chr21	9997462	chr21:9997462:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,0:1:0,0,0	1/1:0,3:3:38,8,0
-chr21	10001908	chr21:10001908:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,30,27:58:255,225,154,255,0,177	1/1:2,42,12:57:255,92,0,255,1,255	1/2:0,33,19:54:255,169,64,255,0,239
-chr21	10003301	chr21:10003301:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:55,19:74:133,0,255	0/1:56,28:85:241,0,255	0/1:31,51:84:255,0,255
-chr21	10004043	chr21:10004043:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:55,32,2:91:255,0,255,255,255,255	0/1:37,39,4:85:255,0,255,255,255,255	1/2:13,40,23:78:255,69,195,255,0,255
-chr21	10018178	chr21:10018178:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,14:41:54,0,170	0/1:30,16:49:44,0,213	0/1:25,15:44:46,0,193
-chr21	10021513	chr21:10021513:M	AAATAAATAAATAAATAAATAAATAAATGAAAT	<10.2>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:57,5:64:0,66,255	0/1:38,13:51:164,0,255	0/0:55,0:66:0,165,255
-chr21	10023756	chr21:10023756:M	AAAAAAAACAAAACAA	<3>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:34,9:43:0,25,230	0/1:13,12:25:48,0,57	0/0:49,7:57:0,79,255
-chr21	10028361	chr21:10028361:M	TTTTTTTTTTTTTTT	<16>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:30,15,14,5:65:213,57,203,0,181,255,126,255,255,255	1/3:12,14,9,15:53:255,219,212,92,94,212,39,0,168,255	0/2:31,18,22,3:77:255,93,235,0,183,255,230,255,255,255
-chr21	10034590	chr21:10034590:M	AAAAGAAAAAAAAAAAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:39,10:50:42,0,255	0/1:17,18:35:205,0,188	0/0:47,1:48:0,123,255
-chr21	10039657	chr21:10039657:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:19,4,4:27:30,7,183,0,204,255	1/2:0,8,3:11:145,38,8,82,0,73	0/1:21,13,0:34:75,0,180,138,255,255
-chr21	10044280	chr21:10044280:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,7,9:26:142,36,80,0,46,158	1/1:3,26,5:35:255,53,0,221,36,255	0/1:9,16,7:33:167,0,19,63,26,215
-chr21	10052192	chr21:10052192:M	TATATATATATACGCATATATATATACACATATATATA	<4>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,7:31:118,0,255	0/1:17,6:24:77,0,255	0/0:15,1:18:0,4,255
-chr21	10069359	chr21:10069359:M	ACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:30,12:46:158,0,255	0/1:15,12:31:193,0,255	0/0:47,0:48:0,140,255
-chr21	10079378	chr21:10079378:M	GAGAGAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:76,13:89:0,13,255	0/1:57,22:80:173,0,255	0/1:56,33:89:255,0,255
-chr21	10081399	chr21:10081399:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,5:41:0,46,255	0/1:14,7:22:43,0,126	0/0:22,0:22:0,62,255
-chr21	10081542	chr21:10081542:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTTATCATCTATCTATTTATCATCTATCTATC	<16.5>,<19.5>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,1,9:10:81,91,203,19,5,0	2/2:0,0,5:5:48,62,126,13,15,0	1/2:0,3,2:5:60,19,36,53,0,61
-chr21	10082927	chr21:10082927:M	TTTTCTTTTGCTTTCTTTTGTTTTTTTT	<5.4>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:61,2:63:0,151,255	0/0:44,0:44:0,125,255	0/1:63,28:92:146,0,255
-chr21	10094384	chr21:10094384:M	AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:9:1,0,66	0/1:5,3:10:20,0,46	0/0:7,1:8:0,9,78
-chr21	10095588	chr21:10095588:M	TTTTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTGTTTTTG	<6.2>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:22,6:28:106,0,255	0/0:28,0:28:0,84,255	0/1:16,10:26:239,0,255
-chr21	10098968	chr21:10098968:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:25:0,69,255	0/0:35,0:35:0,96,255	0/1:22,8:30:16,0,188
-chr21	10100032	chr21:10100032:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,9:41:1,0,235	0/1:21,15:40:61,0,157	0/0:50,13:65:0,19,255
-chr21	10105041	chr21:10105041:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:20:17,0,81	0/1:5,2:9:7,0,35	0/0:11,0:17:0,14,109
-chr21	10106363	chr21:10106363:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:18:255,20,0	1/1:1,9:13:200,6,0	0/1:1,1:6:32,0,15
-chr21	10108527	chr21:10108527:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,5:11:76,0,39	0/1:6,7:19:87,0,108	0/0:14,0:16:0,41,248
-chr21	10110321	chr21:10110321:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:45,21:66:194,0,255	0/1:31,20:52:198,0,255	0/0:55,0:55:0,162,255
-chr21	10118947	chr21:10118947:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<18>	.	.	Motif=GA	GT:AD:DP:PL	0/1:8,10:26:98,0,119	0/1:0,15:32:255,0,9	0/0:9,0:25:0,40,214
-chr21	10122154	chr21:10122154:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,5:48:0,4,255	0/1:26,15:41:255,0,255	0/0:51,0:54:0,156,255
-chr21	10122778	chr21:10122778:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,4:12:19,19,75,0,11,40	0/1:3,3,0:7:17,0,18,30,23,75	0/0:12,0,2:15:0,39,161,9,114,105
-chr21	10123588	chr21:10123588:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:5,10,18:35:178,151,255,67,0,135	1/2:6,12,8:27:95,39,118,71,0,182	2/2:2,0,21:23:202,255,255,40,62,0
-chr21	10124207	chr21:10124207:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:13:168,15,0	1/1:0,16:24:255,53,0	1/1:2,16:24:255,24,0
-chr21	10135895	chr21:10135895:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:16:13,0,84	0/1:3,7:10:56,0,8	0/1:8,4:15:29,0,66
-chr21	10138622	chr21:10138622:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,4:49:0,78,255	0/0:25,1:30:0,51,255	0/1:31,11:43:29,0,255
-chr21	10149470	chr21:10149470:M	AATAAATAAATAAATAAATAA	<6.2>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:21,18:39:126,0,164	0/1:20,15:35:94,0,157	0/0:47,0:47:0,131,255
-chr21	10165429	chr21:10165429:M	TATATATGTATATTATACATATATATGCATGTATATATATGAATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:22,20:42:255,0,255	0/1:32,15:47:255,0,255	0/1:19,15:34:255,0,255
-chr21	10270636	chr21:10270636:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:45,7:53:0,71,255	0/1:30,11:41:15,0,255	0/0:31,9:40:0,7,255
-chr21	10270664	chr21:10270664:M	ATATATAATATATATCATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,7:45:0,48,255	0/1:21,11:32:42,0,255	0/1:21,9:30:23,0,255
-chr21	10271575	chr21:10271575:M	ATATCTATAATATATATTATATATATTTTATATTATATTATCTATACTTAAATATATATATAAATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:7,12:19:94,0,134	0/1:1,4:5:36,0,13	0/1:2,5:7:42,0,34
-chr21	10272705	chr21:10272705:M	ATATAATATACATTATTATATATTATATATGAAATTATATAATATAATTATATTTAATATAAGATATATATAATATGATATATAACATATATAATATA	<27>	.	.	Motif=ATATA	GT:AD:DP:PL	1/1:0,11:11:138,31,0	1/1:0,2:2:25,6,0	1/1:0,15:15:188,42,0
-chr21	10273835	chr21:10273835:M	TATATTATTATATATTATTATATTATATATAATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,58:69:255,0,104	1/1:0,29:29:255,80,0	1/1:1,46:47:255,103,0
-chr21	10273898	chr21:10273898:M	TATATATATGTTATATATATTAAATATATAATTAATATCTGTAATATATATAACATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,27:41:223,0,188	0/1:4,14:19:120,0,56	0/1:3,20:23:181,0,16
-chr21	10325022	chr21:10325022:M	ATAATATTATATAATATATAATAATATTAAATTAAATAATAATTATAATA	<17.7>	.	.	Motif=ATA	GT:AD:DP:PL	1/1:0,6:7:102,18,0	.	.
-chr21	10327150	chr21:10327150:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:39,85:167:255,0,255	0/1:30,108:165:255,0,255	0/1:36,50:170:255,0,255
-chr21	10327672	chr21:10327672:M	TTTTTTGTTTTTTTGTTTTTGTTTTTTGTTTTTT	<35>,<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:30,32,17:105:255,0,255,80,47,255	1/2:21,44,41:130:255,255,255,255,0,255	0/1:72,39,20:146:255,0,255,108,255,255
-chr21	10331685	chr21:10331685:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:165,58:227:255,0,255	0/1:122,80:212:255,0,255	0/1:132,32:198:41,0,255
-chr21	10334325	chr21:10334325:M	ATATATATATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:56,14:77:0,24,255	0/1:21,22:58:135,0,186	0/0:64,16:89:0,28,255
-chr21	10334340	chr21:10334340:M	TTTTTTTTTCTTTCTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:54,15:71:193,0,255	0/0:36,0:38:0,113,255	0/1:38,22:69:255,0,255
-chr21	10334799	chr21:10334799:M	TTTTTTCTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:49,21:72:255,0,255	0/1:50,13:67:155,0,255	0/1:65,23:93:255,0,255
-chr21	10336724	chr21:10336724:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,10,14:45:255,79,255,0,240,255	0/2:11,10,12:39:255,20,228,0,120,255	0/1:17,14,11:50:255,0,255,38,252,255
-chr21	10340305	chr21:10340305:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:127,13,51:196:255,255,255,0,255,255	0/2:91,17,62:175:255,255,255,0,255,255	0/1:88,52,19:161:255,0,255,255,255,255
-chr21	10341491	chr21:10341491:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:59,76:184:255,0,255	0/1:31,123:179:255,0,255	0/1:90,15:168:39,0,255
-chr21	10348141	chr21:10348141:M	AAAAACAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:67,101,39:210:255,0,255,255,255,255	0/1:53,106,28:189:255,0,255,255,255,255	1/2:19,116,50:189:255,255,255,255,0,255
-chr21	10348506	chr21:10348506:M	AAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:73,48,33:160:255,0,255,250,255,255	0/2:66,39,56:164:255,255,255,0,255,255	0/1:73,47,35:157:255,0,255,197,255,255
-chr21	10353496	chr21:10353496:M	TTTTTTTTGTTTTTTTTTTGTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:35,82:161:255,0,255	0/1:35,56:141:255,0,255	0/1:35,66:134:255,0,255
-chr21	10355841	chr21:10355841:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,29,2:59:255,17,0,255,59,255	1/1:1,43,3:63:255,106,0,255,84,255	1/2:5,13,14:40:255,98,168,82,0,152
-chr21	10357174	chr21:10357174:M	TATATATATATGTATATA	<10>,<12>	.	.	Motif=TA	GT:AD:DP:PL	0/1:92,52,28:190:255,0,255,56,255,255	0/2:47,17,24:88:255,255,255,0,255,255	0/1:72,43,21:146:255,0,255,120,255,255
-chr21	10357635	chr21:10357635:M	CTTTCTTTCTTT	<1.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:22,8:34:180,0,255	0/1:26,11:39:214,0,255	0/0:28,3:33:0,8,255
-chr21	10367657	chr21:10367657:M	CACACACACACACACACACACACACACAGACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/1:34,45:198:255,0,255	0/1:43,61:210:255,0,255	0/1:25,18:172:255,0,255
-chr21	10370540	chr21:10370540:M	CTAGCTAGCTAGCT	<2.5>	.	.	Motif=CTAG	GT:AD:DP:PL	0/1:183,86:269:255,0,255	0/1:152,71:223:255,0,255	0/1:167,83:250:255,0,255
-chr21	10370588	chr21:10370588:M	TCTACTATATATCCATCATCTATCTATTATCCATCCATCTATCCATCTATCTATATATGTATTTATCTAT	<16.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:45,20:74:47,0,255	0/0:50,16:72:0,2,255	0/0:51,13:81:0,29,255
-chr21	10370708	chr21:10370708:M	CTAGCTAGCTAGCT	<2.5>	.	.	Motif=CTAG	GT:AD:DP:PL	0/1:137,55:197:112,0,255	0/1:140,51:198:79,0,255	0/0:150,44:201:0,0,255
-chr21	10370723	chr21:10370723:M	TCTATCTATCTACCTATC	<3.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:53,47:108:255,0,255	0/1:58,53:117:255,0,255	0/1:70,47:134:255,0,255
-chr21	10372020	chr21:10372020:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:76,126:248:255,0,255	0/1:77,138:231:255,0,255	0/1:80,74:193:255,0,255
-chr21	10372841	chr21:10372841:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:37:44,0,61	0/1:4,14:30:63,0,34	0/1:8,5:22:3,0,52
-chr21	10376581	chr21:10376581:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,80:127:255,0,37	0/1:16,61:110:255,0,112	0/1:20,73:119:255,0,157
-chr21	10377648	chr21:10377648:M	TTTTTTTTCTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:42,31:77:92,0,228	0/1:34,28:63:97,0,160	0/0:72,25:98:0,17,255
-chr21	10379736	chr21:10379736:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:55,18:76:0,17,255	0/1:45,20:66:26,0,255	0/0:80,16:103:0,108,255
-chr21	10381537	chr21:10381537:M	ACACACACACGCATACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:42,38:80:255,0,255	0/1:31,45:78:255,0,255	0/1:64,22:87:255,0,255
-chr21	10381570	chr21:10381570:M	ACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:55,48:104:255,0,255	0/1:37,67:105:255,0,255	0/1:67,39:106:255,0,255
-chr21	10382554	chr21:10382554:M	AAAAAAAAAAAAACAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:31,7:64:34,0,255	0/1:25,11:41:154,0,255	0/1:37,14:95:171,0,255
-chr21	10382572	chr21:10382572:M	AAGAAGAAGAAGAAAGAAAGAAAACAAAAAAGAAGAAGAAGAAAGAAAGAAAAAAAAGAAAAGAA	<22.3>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,10:18:119,34,0	1/1:0,9:17:77,22,0	1/1:0,9:21:121,35,0
-chr21	10382937	chr21:10382937:M	AAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:3,8,25:57:255,57,126,21,7,0	0/2:4,0,35:72:255,156,255,0,110,18	0/1:1,25,12:64:255,0,124,87,64,115
-chr21	10386555	chr21:10386555:M	AATTAATTAATTAA	<2.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:58,94:153:255,0,255	0/1:35,115:150:255,0,194	0/1:62,108:171:255,0,255
-chr21	10386619	chr21:10386619:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,78:78:255,231,0	1/1:2,63:65:255,155,0	1/1:0,94:94:255,255,0
-chr21	10386831	chr21:10386831:M	TTTTTTGTTTTTTGGTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,15:46:102,0,255	0/0:35,0:39:0,100,255	0/1:22,29:57:255,0,187
-chr21	10387432	chr21:10387432:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:92,38:150:78,0,255	0/1:78,39:122:38,0,255	0/0:115,26:165:0,27,255
-chr21	10388268	chr21:10388268:M	AGGAGGAGGAGGAGGAGCGGGAGGAGCAGGAGGAG	<10.7>	.	.	Motif=AGG	GT:AD:DP:PL	0/1:23,13:47:28,0,120	0/1:18,12:34:33,0,88	0/0:40,12:56:0,21,255
-chr21	10388964	chr21:10388964:M	AAAAATAAAAATAAAAATAAA	<4.5>	.	.	Motif=AAAAAT	GT:AD:DP:PL	0/1:163,35:202:82,0,255	0/1:128,26:160:9,0,255	0/1:141,68:210:255,0,255
-chr21	10392835	chr21:10392835:M	TGTTTTTTGTTTGTTTTTGTATTTTTGTTTTTTTGTTTTTGT	<6.7>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/1:66,83:158:255,0,255	0/1:66,72:138:255,0,255	0/1:63,52:119:255,0,255
-chr21	10395953	chr21:10395953:M	TCTCTGTCTCCCTCTCTCTCTCTGTCTGTCTCTGTTTCTGCTTCTCTGTCTCCATCTCTTTCTCTCTCTGTGTCTCTCT	<11.7>,<12.5>	.	.	Motif=TCTCTC	GT:AD:DP:PL	0/2:10,4,7:22:95,57,255,0,112,147	0/1:4,7,2:14:122,0,76,96,38,155	0/1:14,7,3:24:93,0,255,78,205,255
-chr21	10396039	chr21:10396039:M	TCTCTGTCTCTGTCTTTCTCTCCATCTCTGTATCTGTC	<7>	.	.	Motif=TCTCTG	GT:AD:DP:PL	1/1:0,16:16:249,46,0	1/1:0,11:11:171,32,0	1/1:0,17:17:255,49,0
-chr21	10398128	chr21:10398128:M	AAAACAAAACAAA	<1.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:135,71:206:255,0,255	0/1:110,75:185:255,0,255	0/1:123,51:174:255,0,255
-chr21	10398226	chr21:10398226:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:60,8:96:0,98,255	0/1:52,25:92:188,0,255	0/0:75,3:107:0,255,255
-chr21	10399238	chr21:10399238:M	TTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,21:63:255,0,27	0/1:3,20:71:255,0,71	0/1:8,25:64:255,0,248
-chr21	10401726	chr21:10401726:M	CAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCAAACCA	<9.4>	.	.	Motif=CAAAC	GT:AD:DP:PL	1/1:13,66:122:255,153,0	1/1:19,35:110:255,73,0	1/1:10,65:103:255,134,0
-chr21	10403944	chr21:10403944:M	TTTTATTTATTTTGTTTTACTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<12.6>,<13.4>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:2,12,0:18:107,16,0,123,37,174	1/2:0,8,4:12:137,49,18,71,0,69	1/1:3,22,0:30:205,36,0,226,63,255
-chr21	10404536	chr21:10404536:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:46,15:62:92,0,255	0/1:42,28:71:255,0,255	0/0:77,9:87:0,95,255
-chr21	10405054	chr21:10405054:M	AACAACAACAACAACAACAACAACAACAAAAAACAAAGAAAACAAACAACAACAA	<18>,<19.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/2:9,3,16:35:75,105,255,0,59,64	1/2:0,8,14:32:150,90,255,84,0,127	0/2:10,2,32:56:205,255,255,0,86,8
-chr21	10405906	chr21:10405906:M	ATTTTATTTATTTTAATTTTATTTTTTTT	<5.6>	.	.	Motif=ATTTT	GT:AD:DP:PL	0/1:24,25:56:51,0,17	1/1:0,44:54:251,93,0	0/0:51,13:72:0,30,147
-chr21	10406088	chr21:10406088:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:21,13:58:247,0,255	0/1:22,19:64:255,0,255	0/1:21,9:77:255,0,255
-chr21	10411695	chr21:10411695:M	AAAACCAAACCAAACTAAACCAAAACAAAAAAAAC	<6.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:52,25:92:21,0,74	0/1:26,32:59:41,0,20	0/0:75,11:95:0,70,238
-chr21	10415921	chr21:10415921:M	AAAACAAAACAAAACAAAACAAAAC	<4>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:47,214:262:255,225,0	1/1:28,218:246:255,255,0	1/1:55,204:260:255,148,0
-chr21	10418381	chr21:10418381:M	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:22,24:164:255,0,255	0/1:10,27:102:255,0,255	0/1:3,35:143:255,0,255
-chr21	10420350	chr21:10420350:M	TTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,41:62:255,0,184	0/1:5,30:37:255,0,35	0/1:12,38:60:255,0,190
-chr21	10422009	chr21:10422009:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:50,97:147:255,0,82	1/1:9,138:147:255,255,0	0/1:50,88:138:255,0,103
-chr21	10422126	chr21:10422126:M	TTTTTTTTTTTTTTT	<13>,<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/3:7,25,39,14:110:255,238,255,193,255,255,255,99,0,255	1/3:10,26,15,26:94:255,202,255,255,255,255,255,0,69,255	1/3:4,35,33,15:117:255,217,255,255,255,255,255,0,25,255
-chr21	10423314	chr21:10423314:M	TATATATATATTTATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:167,77:244:255,0,255	0/1:114,89:203:255,0,255	0/1:182,44:226:146,0,255
-chr21	10425218	chr21:10425218:M	TTTTTTTTTTCTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:91,86,93:272:255,141,183,0,114,255	1/1:89,116,84:292:255,7,0,77,49,255	0/1:127,72,37:239:240,0,255,183,255,255
-chr21	10427526	chr21:10427526:M	ACACACACACACAAACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:138,167:313:255,0,255	0/1:228,140:371:255,0,255	0/1:173,180:360:255,0,255
-chr21	10431007	chr21:10431007:M	TTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:69:255,84,0	1/1:1,36:87:255,187,0	0/1:2,13:44:255,0,4
-chr21	10431777	chr21:10431777:M	TCTCTCTCTCT	<3.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:168,90:330:255,0,255	0/1:184,70:339:175,0,255	0/0:260,34:335:0,255,255
-chr21	10434161	chr21:10434161:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:11,84:163:255,128,0	1/1:14,107:218:255,255,0	1/1:9,101:198:255,112,0
-chr21	10434867	chr21:10434867:M	TTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.8>,<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:11,16,21:64:159,103,244,90,0,206	0/2:16,0,19:45:92,171,255,0,100,48	1/2:0,25,20:51:255,159,213,210,0,255
-chr21	10435892	chr21:10435892:M	TATTATTATTA	<2.7>	.	.	Motif=TAT	GT:AD:DP:PL	0/1:220,46:266:106,0,255	0/1:212,65:277:255,0,255	0/1:201,77:278:255,0,255
-chr21	10437769	chr21:10437769:M	ATATATATATATATATATATATATATA	<10.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,4,9:41:157,0,70,133,63,255	1/2:0,2,5:12:133,45,27,99,0,124	1/1:1,14,2:38:255,3,0,255,73,255
-chr21	10439737	chr21:10439737:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,58:108:255,0,72	1/1:1,75:109:255,116,0	0/1:29,43:98:255,0,180
-chr21	10439930	chr21:10439930:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:11,17,41:73:255,244,163,37,0,40	0/2:33,9,32:79:255,175,247,0,162,255	1/2:3,21,37:75:255,255,186,101,0,22
-chr21	10445599	chr21:10445599:M	CTTTCTTTTCTTACTTTCTTT	<2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:50,12:65:171,0,255	0/1:36,16:56:255,0,255	0/1:68,9:81:144,0,255
-chr21	10446180	chr21:10446180:M	TTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTTG	<3.7>,<4.7>	.	.	Motif=TTTGTT	GT:AD:DP:PL	1/2:17,34,91:142:255,255,255,255,0,255	1/2:15,55,75:145:255,255,255,255,0,255	2/2:13,18,116:147:255,255,255,234,74,0
-chr21	10447391	chr21:10447391:M	TTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:47:255,111,0	1/1:0,14:31:255,67,0	1/1:0,6:44:255,72,0
-chr21	10447576	chr21:10447576:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,47:152:255,0,255	0/1:12,43:118:255,0,255	0/1:36,40:132:255,0,255
-chr21	10449373	chr21:10449373:M	ATATATATGTATGTATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:0,77:156:255,0,255	0/1:1,111:171:255,0,255	0/1:0,78:161:255,0,255
-chr21	10449701	chr21:10449701:M	AAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,73:138:255,0,1	1/1:0,81:129:255,255,0	0/1:48,32:124:255,0,255
-chr21	10451234	chr21:10451234:M	TTTTTTTTTTTTT	<11>,<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/3:11,22,52,46:134:255,255,255,255,255,255,255,237,0,255	1/2:6,45,75,14:145:255,255,255,214,0,46,255,255,191,255	2/3:13,45,48,43:155:255,186,255,236,255,255,255,22,0,255
-chr21	10456321	chr21:10456321:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,12,2:20:255,0,34,70,36,85	1/2:2,9,5:18:255,1,23,25,0,25	1/1:1,11,1:20:255,10,0,106,20,86
-chr21	10459762	chr21:10459762:M	TTTTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:42,86,88:218:255,255,255,255,0,255	1/2:22,103,64:191:255,255,255,255,0,255	1/2:54,70,99:228:255,255,255,255,0,255
-chr21	10461781	chr21:10461781:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:48,65:160:255,0,255	0/1:17,91:163:255,0,40	0/1:56,34:131:255,0,255
-chr21	10468480	chr21:10468480:M	TGTGTGTGTGTGTGTATGTGTGTGTGTCTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,40:67:255,0,201	1/1:3,44:59:255,62,0	0/1:45,12:71:91,0,255
-chr21	10469402	chr21:10469402:M	AACAGCAACAACAACAGCAACAACAGCAACAACAACAACAA	<15.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:33,11:51:98,0,255	0/1:35,6:46:2,0,255	0/1:41,32:80:255,0,255
-chr21	10470052	chr21:10470052:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:18:138,0,189	1/1:0,10:15:255,11,0	0/1:20,10:33:195,0,255
-chr21	10470069	chr21:10470069:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<15>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,7,30,8:59:221,166,255,68,62,30,239,221,0,255	2/2:0,0,43,7:67:194,255,255,38,154,0,244,255,1,255	1/3:0,15,5,15:49:255,144,255,255,208,255,255,0,140,255
-chr21	10471357	chr21:10471357:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:112,11,0	1/1:0,0:1:23,3,0	1/1:0,3:5:124,15,0
-chr21	10472288	chr21:10472288:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:45,98,32:177:255,0,253,255,92,255	1/2:14,100,55:169:255,238,110,255,0,255	0/1:62,81,28:176:255,0,255,255,229,255
-chr21	10474923	chr21:10474923:M	TTTTGTTTTGTTTTG	<2.8>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:53,80:133:255,0,255	0/1:41,130:171:255,0,255	0/1:52,76:134:255,0,255
-chr21	10476863	chr21:10476863:M	TTTTGTTTTTTGTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:48,17:65:56,0,255	0/1:36,11:47:18,0,255	0/0:67,12:80:0,59,255
-chr21	10477785	chr21:10477785:M	TATTTCTTTATTTTATTTTTATTTATTT	<6>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:34,79:122:255,0,30	1/1:27,82:109:255,54,0	0/1:32,67:125:194,0,128
-chr21	10486318	chr21:10486318:M	ATATATATATATATATATATATATA	<7.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,32:49:255,255,255,255,0,255	2/2:0,0,34:38:255,255,255,105,101,0	1/2:0,27,32:60:255,255,255,255,0,255
-chr21	10486645	chr21:10486645:M	TTTTTTTTCTTCTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:38:9,0,240	0/0:23,2:32:0,44,255	0/1:23,15:45:83,0,197
-chr21	10487145	chr21:10487145:M	TTTCTTTTTTTTTTCTTTCTTTCTTT	<5.5>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:24,28:69:255,0,255	0/1:24,26:65:255,0,240	0/1:35,28:72:255,0,255
-chr21	10489767	chr21:10489767:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:24,0,28	0/1:5,4:10:33,0,34	0/1:7,4:12:19,0,57
-chr21	10495296	chr21:10495296:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:16:37,0,140	0/0:11,0:11:0,32,178	0/0:24,1:25:0,56,255
-chr21	10497571	chr21:10497571:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:10:37,0,34	1/1:1,9:10:105,15,0	0/0:27,4:36:0,36,255
-chr21	10501513	chr21:10501513:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:25:255,65,0	1/1:0,18:25:255,53,0	1/1:0,24:26:255,77,0
-chr21	10501938	chr21:10501938:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,34:36:255,70,0	1/1:0,34:34:255,100,0	1/1:1,38:40:255,99,0
-chr21	10510877	chr21:10510877:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,31:57:255,255,167,241,0,83	2/2:0,4,29:34:255,255,242,100,49,0	1/2:0,21,25:63:255,255,126,209,0,94
-chr21	10511667	chr21:10511667:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,8,4:14:255,255,255,64,64,24,87,84,0,45	3/3:0,0,0,1:4:80,78,77,45,45,36,11,11,10,0	1/2:0,6,7,3:18:255,192,151,134,0,85,211,28,89,171
-chr21	10512046	chr21:10512046:M	TTTTCTTTTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:9:49,0,0	1/1:0,6:8:89,22,0	0/1:1,2:5:21,0,9
-chr21	10512370	chr21:10512370:M	TTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,120,0	1/1:0,29:29:255,87,0	1/1:3,47:54:255,70,0
-chr21	10516135	chr21:10516135:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,18:33:255,253,158,189,0,94	2/2:0,1,21:24:255,255,255,72,54,0	1/2:0,13,22:39:255,255,180,212,0,108
-chr21	10516457	chr21:10516457:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,53:53:255,157,0	1/1:0,35:35:255,103,0	1/1:0,88:88:255,255,0
-chr21	10516879	chr21:10516879:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT	<10.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:7,6:17:20,0,55	0/1:5,8:13:47,0,17	0/0:24,1:28:0,61,255
-chr21	10516923	chr21:10516923:M	TATCTATCTGTCTATCTGTCTATCTATCTATCTATCT	<11.2>,<12.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,22:35:255,209,110,117,0,22	2/2:0,0,15:17:255,174,131,45,37,0	1/2:0,10,12:28:255,146,75,92,0,24
-chr21	10518572	chr21:10518572:M	CAAACAAACAAACAAACAAACAAACAAA	<6>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,60:60:255,178,0	1/1:0,34:34:255,100,0	1/1:0,69:69:255,204,0
-chr21	10519316	chr21:10519316:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,38:40:255,99,0	1/1:2,22:24:255,35,0	1/1:2,47:51:255,104,0
-chr21	10527134	chr21:10527134:M	CTCTCTCTCTCTCTCTCTCTCTCTC	<14.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:22,16:40:255,0,255	0/0:32,0:32:0,95,255	0/1:46,10:59:50,0,255
-chr21	10528201	chr21:10528201:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,38,16:54:255,255,116,255,0,255	2/2:0,2,33:37:255,255,255,105,75,0	1/2:5,63,19:88:255,241,74,255,0,255
-chr21	10529184	chr21:10529184:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,4:22:7,0,221	0/0:10,0:13:0,34,184	0/1:17,6:24:31,0,224
-chr21	10540010	chr21:10540010:M	AAAAACCAAAAACAACAACAACAAACAAAAACAAAAAACCAAAACAAAA	<7.5>	.	.	Motif=AAAAAC	GT:AD:DP:PL	0/1:29,11:40:166,0,255	0/0:27,0:27:0,81,255	0/1:33,19:52:255,0,255
-chr21	10541479	chr21:10541479:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:37,20:59:255,0,255	0/0:29,0:31:0,90,255	0/1:60,17:79:228,0,255
-chr21	10559916	chr21:10559916:M	ATATATATCTATATATACATATATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:34,8:42:54,0,255	0/0:27,0:27:0,81,255	0/1:54,22:76:255,0,255
-chr21	10567108	chr21:10567108:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0,0:29:0,81,255,83,255,255	0/2:8,0,6:14:49,90,255,0,119,79	0/1:14,14,1:34:255,0,255,255,195,255
-chr21	10572005	chr21:10572005:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,12:35:43,0,144	0/1:12,9:22:47,0,70	0/1:32,13:48:38,0,217
-chr21	10575827	chr21:10575827:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:57,1:58:0,148,255	0/0:39,0:39:0,107,255	0/1:66,24:93:48,0,255
-chr21	10576826	chr21:10576826:M	TATACATATATACATATATATATATATATATATATATATATATATATATATA	<18>,<27>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,12,5:26:255,0,194,255,13,255	0/0:0,0,0:2:0,6,58,5,23,17	1/2:0,8,4:13:214,23,79,196,0,192
-chr21	10584880	chr21:10584880:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,11:26:169,93,126,130,0,197	0/1:12,8,0:21:30,0,59,83,85,220	1/2:16,21,15:53:89,15,166,80,0,255
-chr21	10585242	chr21:10585242:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<28>,<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,14,1:28:216,0,159,135,106,187	0/2:6,0,11:17:67,85,185,0,60,16	0/1:32,8,3:43:41,0,255,45,255,255
-chr21	10588198	chr21:10588198:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,17:49:37,0,179	0/0:28,1:31:0,69,255	0/1:34,35:73:173,0,145
-chr21	10592806	chr21:10592806:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>	.	.	Motif=GT	GT:AD:DP:PL	0/0:44,0:45:0,133,255	0/0:31,0:33:0,98,255	0/1:42,16:64:140,0,255
-chr21	10597401	chr21:10597401:M	TTTTCTTTTTTCTTTTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:2,0,93	0/0:5,1:6:0,3,59	0/1:12,11:28:136,0,101
-chr21	10599800	chr21:10599800:M	TTAGTTAGTTAGTTAGTTAGTTAGTTAGTT	<6.5>	.	.	Motif=TTAG	GT:AD:DP:PL	0/0:49,0:63:0,21,255	0/1:20,16:36:100,0,150	0/0:60,1:72:0,67,255
-chr21	10611944	chr21:10611944:M	AAAAAAAAAAA	<12>,<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,18,0,26:45:255,255,255,255,200,242,142,0,126,164	3/3:0,0,0,45:45:255,255,255,255,255,255,135,131,108,0	2/3:0,15,26,22:64:255,255,255,178,66,36,227,48,0,182
-chr21	10615293	chr21:10615293:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,4,22:41:255,189,242,0,114,196	2/2:0,2,24:30:255,255,255,83,58,0	0/1:21,23,11:57:202,0,92,78,124,255
-chr21	10617403	chr21:10617403:M	GAAGGAAGGAAAAAGGAGGAAAGGAAGGGAGGGAGGAAGGAAG	<1.8>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,5:5:255,15,0	1/1:0,1:1:52,3,0	1/1:0,2:2:106,6,0
-chr21	10617559	chr21:10617559:M	GAAAGAAAGAAGGAAAGAAGGAAGGAAGGAGAAAAGAAAGAAAAGAAAGGAAAAGAAAAAAAAGAAAGA	<16.5>,<17.5>	.	.	Motif=GAAA	GT:AD:DP:PL	2/2:0,0,9:15:47,64,107,16,19,0	2/2:0,0,8:8:45,62,100,16,22,0	1/2:0,10,16:31:184,86,139,100,0,52
-chr21	10617758	chr21:10617758:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,30:51:177,0,83	1/1:1,39:40:255,94,0	0/1:21,40:61:252,0,56
-chr21	10620402	chr21:10620402:M	AAAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,15,8:23:255,86,18,153,0,85	1/1:0,20,0:20:255,60,0,248,51,189	1/2:0,16,8:24:255,86,15,162,0,91
-chr21	10637210	chr21:10637210:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,20:20:255,59,0
-chr21	10641224	chr21:10641224:M	ACACACACACACACACACACACGCACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,35:35:255,92,0	1/1:0,21:23:235,60,0	1/1:0,51:68:255,178,0
-chr21	10650893	chr21:10650893:M	ACACACACACACACACACACACACACACACACACACA	<25.5>,<26.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,5,5,0:12:253,45,12,51,0,20,195,41,50,173	2/2:0,0,3,0:3:85,31,22,9,7,0,53,29,9,44	1/3:0,3,1,8:18:255,197,162,135,104,91,73,0,7,33
-chr21	10732811	chr21:10732811:M	CCTTCCCCTTCC	<1.8>	.	.	Motif=CCTTCC	GT:AD:DP:PL	1/1:2,47:49:255,93,0	1/1:2,36:38:231,69,0	1/1:0,73:73:255,160,0
-chr21	10738615	chr21:10738615:M	CATTCCATTTGATTCCATTCGATTC	<27>	.	.	Motif=CATTC	GT:AD:DP:PL	0/1:42,25:67:109,0,255	0/1:34,16:50:48,0,255	0/1:72,27:99:40,0,255
-chr21	10738670	chr21:10738670:M	CATTCGATTCCATTCC	<27>	.	.	Motif=CATTC	GT:AD:DP:PL	0/1:54,25:79:73,0,255	0/1:39,16:55:33,0,255	0/1:81,27:108:13,0,255
-chr21	10738725	chr21:10738725:M	ATTCCATTCCA	<27>	.	.	Motif=ATTCC	GT:AD:DP:PL	0/1:62,25:87:56,0,255	0/1:30,16:46:64,0,255	0/1:82,27:109:17,0,255
-chr21	10774031	chr21:10774031:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,56:56:255,165,0	1/1:0,42:42:255,124,0
-chr21	10775774	chr21:10775774:M	AATAAAGTAAATAAATAAAATAAATAAATAAAT	<9>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:1,30:31:255,68,0	1/1:1,19:20:255,35,0	1/1:1,45:46:255,113,0
-chr21	12997128	chr21:12997128:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:62,2:64:0,154,255	0/0:70,2:75:0,185,255	0/1:46,21:69:129,0,255
-chr21	12999938	chr21:12999938:M	AAAAAATAAAAAAAAAAAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,24:43:182,0,88	0/1:24,8:35:9,0,206	0/1:14,23:40:181,0,60
-chr21	13000071	chr21:13000071:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.5>,<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/2:7,17,13:37:255,9,93,58,0,105	0/1:8,31,0:40:255,0,97,255,157,255	0/1:14,28,10:53:255,0,224,219,169,255
-chr21	13001123	chr21:13001123:M	AAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAGAAAGA	<17.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,7:10:40,0,3	1/1:0,6:7:55,15,0	0/0:12,0:15:0,37,134
-chr21	13005366	chr21:13005366:M	GTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:28,13:42:117,0,255	0/1:27,23:53:255,0,255	0/0:42,8:51:0,5,255
-chr21	13007695	chr21:13007695:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,0:14:0,0,96	0/0:14,1:19:0,19,155	0/1:13,7:26:77,0,112
-chr21	13011665	chr21:13011665:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,5:25:22,0,191	0/1:16,9:26:55,0,165	0/0:28,2:31:0,59,255
-chr21	13012234	chr21:13012234:M	AAAAAACAAAAAAAAAAAACAAAAA	<26>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,23,10:39:255,254,190,255,0,255	1/2:11,13,18:44:255,255,255,21,0,255	0/1:10,17,0:39:112,0,45,124,57,255
-chr21	13014603	chr21:13014603:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,15,7:44:88,0,197,109,93,255	0/2:29,2,17:49:82,190,255,0,253,240	0/1:24,20,9:53:100,0,248,134,126,255
-chr21	13016283	chr21:13016283:M	AAAAAAAAAAGAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:24,5,12:41:132,82,255,0,255,255	0/1:27,18,1:47:255,0,255,255,255,255	0/2:32,0,8:41:8,107,255,0,255,255
-chr21	13016950	chr21:13016950:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,12:47:180,0,255	0/1:34,29:65:255,0,255	0/1:28,11:45:178,0,255
-chr21	13017296	chr21:13017296:M	TTTTTTTATTTTTTTGTTTTTTATTTTTTATTTATTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	0/2:18,8,10:36:255,27,255,0,255,255	0/1:26,15,0:41:255,0,255,196,255,255	0/2:23,5,5:33:122,0,255,0,255,255
-chr21	13017975	chr21:13017975:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,13:40:255,0,255	0/1:24,14:39:255,0,255	0/1:20,17:39:255,0,255
-chr21	13020152	chr21:13020152:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:45,11:56:26,0,255	0/0:46,2:53:0,117,255	0/1:36,14:56:92,0,255
-chr21	13020463	chr21:13020463:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,8:14:67,0,26	0/1:5,2:8:3,0,51	0/1:6,5:13:33,0,46
-chr21	13021130	chr21:13021130:M	AAAAAACAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:47,37:84:255,0,255	0/1:36,42:79:255,0,255	0/1:46,33:80:255,0,255
-chr21	13021854	chr21:13021854:M	AAACAAAAAAACAAACAAAAACAAACAAACAAACAAA	<6.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:32,35:71:255,0,255	0/1:27,22:55:255,0,255	0/1:33,22:57:255,0,255
-chr21	13026281	chr21:13026281:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:33,15,18:67:255,84,255,0,255,255	0/2:38,0,38:76:255,255,255,0,255,255	0/1:35,45,0:80:255,0,255,255,255,255
-chr21	13028775	chr21:13028775:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,0:3:20,0,20	0/1:3,5:13:147,0,42	0/1:2,3:8:60,0,50
-chr21	13032595	chr21:13032595:M	AAAATAAAATAAAATAAAATAAAATTAAAATAAAATAAAATAAAATAAAATAAAAATAAA	<7.8>,<8.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:18,4,3:25:74,0,255,14,255,255	0/2:5,0,6:11:134,82,188,0,121,104	0/1:12,10,0:22:211,0,255,139,255,255
-chr21	13034143	chr21:13034143:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:34,38:78:255,0,255	0/1:37,34:73:255,0,255	0/1:32,35:72:255,0,255
-chr21	13034350	chr21:13034350:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0,0:1:0,3,27,3,27,27	2/2:0,0,3:5:85,83,88,4,12,0	0/1:1,4,0:7:118,0,6,108,24,125
-chr21	13034668	chr21:13034668:M	AAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:38,10:60:158,0,255	0/1:31,21:56:255,0,255	0/1:33,1:54:17,0,255
-chr21	13034845	chr21:13034845:M	TTTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,5,4:11:157,28,51,48,0,71	0/1:2,10,0:13:242,0,16,199,48,225	0/2:8,0,3:12:47,57,253,0,203,194
-chr21	13039472	chr21:13039472:M	AATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:25,8:40:0,20,86	0/1:11,7:18:2,0,23	0/0:19,0:28:0,38,103
-chr21	13039507	chr21:13039507:M	AAAAAGAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:43:255,0,109	0/1:15,12:32:136,0,146	0/0:43,4:49:0,59,255
-chr21	13043998	chr21:13043998:M	TTTTCTTTTTTTCTTTCTCTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:18:189,0,69	0/1:4,8:15:168,0,66	0/1:11,0:22:21,0,241
-chr21	13092357	chr21:13092357:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,6,10:27:183,65,135,0,76,201	0/1:15,10,3:28:86,0,116,67,155,255	0/1:10,21,0:33:184,0,62,220,152,255
-chr21	13093615	chr21:13093615:M	AAAAAAAAAAAAAGAAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:36:255,88,0	1/1:2,30:33:255,65,0	1/1:1,41:42:255,106,0
-chr21	13102290	chr21:13102290:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:41,7:48:0,45,255	0/1:27,10:37:21,0,230	0/0:30,6:36:0,25,255
-chr21	13137904	chr21:13137904:M	ATAATAATAAAATAAAATAAAATAAAA	<4.4>	.	.	Motif=ATAAA	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:28,0:28:0,82,255	0/1:40,15:55:120,0,255
-chr21	13172591	chr21:13172591:M	TTTTTTCTTTTTCTTTCTTTCTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,8:25:147,0,255	0/0:17,0:17:0,51,255	0/1:20,9:31:166,0,255
-chr21	13192562	chr21:13192562:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,55,0	1/1:1,12:13:183,21,0	1/1:0,17:18:255,42,0
-chr21	13196897	chr21:13196897:M	AAAAAAAAAAAAAAAGAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,11:14:121,0,4	0/1:16,6:23:19,0,173	0/1:12,13:25:116,0,102
-chr21	13211837	chr21:13211837:M	TATATATATATATATATTATATATATATATATATATATA	<18.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,14:17:255,32,0	0/1:0,1:2:12,0,6	0/1:3,4:7:51,0,33
-chr21	13224899	chr21:13224899:M	AAAACAAAACAAAACAAGACAAAACAAAACAAGACAAAACAAAACAAAA	<10>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,18:18:255,53,0	1/1:0,20:20:255,59,0
-chr21	13234311	chr21:13234311:M	AAAAAAGAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,17:37:215,0,255	1/1:0,49:50:255,147,0	0/1:30,11:41:84,0,255
-chr21	13246762	chr21:13246762:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,13:23:255,0,182	1/1:0,32:33:255,99,0	0/1:13,16:29:255,0,255
-chr21	13251063	chr21:13251063:M	ATATATATATATA	<8.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,6,4:19:65,0,119,70,124,255	2/2:0,0,4:4:49,49,49,11,11,0	0/0:17,3,1:24:0,7,255,56,255,255
-chr21	13251105	chr21:13251105:M	ATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:14,4:21:0,13,255	0/1:0,4:6:31,0,8	0/0:18,1:23:0,55,255
-chr21	13255290	chr21:13255290:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:21:133,0,115	1/1:0,9:14:169,29,0	0/1:15,8:23:76,0,202
-chr21	13259015	chr21:13259015:M	CTCTTTCTCTTT	<1.7>	.	.	Motif=CTCTTT	GT:AD:DP:PL	0/1:15,16:31:255,0,255	1/1:0,27:27:255,81,0	0/1:13,20:33:255,0,255
-chr21	13261623	chr21:13261623:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,16:38:255,0,255	1/1:0,29:29:255,87,0	0/1:16,18:35:255,0,255
-chr21	13264531	chr21:13264531:M	CACACACACACACACACACACACACACATGCACACACACACA	<23>,<25>,<26>	.	.	Motif=CA	GT:AD:DP:PL	0/1:12,9,0,0:22:201,0,255,237,255,255,240,255,255,255	1/2:0,8,8,0:19:255,208,177,212,0,204,255,138,235,255	0/3:18,1,0,10:30:211,240,255,174,255,255,0,255,255,255
-chr21	13265399	chr21:13265399:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:134,0,96	1/1:3,18:22:250,2,0	0/1:21,12:35:132,0,255
-chr21	13267824	chr21:13267824:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:14,16:30:255,0,255	1/1:0,20:22:255,60,0	0/1:9,14:23:255,0,181
-chr21	13268681	chr21:13268681:M	ACACACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,8:25:77,0,187	1/1:1,32:36:255,58,0	0/1:15,15:32:179,0,197
-chr21	13272272	chr21:13272272:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,19,11:54:255,0,255,105,161,229	0/2:13,11,24:49:251,77,255,0,12,13	0/2:25,8,11:45:83,14,255,0,197,167
-chr21	13278047	chr21:13278047:M	GAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGAG	<16.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:15,14:30:187,0,196	1/1:0,14:14:251,41,0	0/1:13,13:27:169,0,160
-chr21	13279121	chr21:13279121:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,13:28:172,0,181	1/1:0,38:38:255,112,0	0/1:26,22:48:255,0,255
-chr21	13290891	chr21:13290891:M	CACACACACACACACAC	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,22:40:255,0,210	1/1:0,33:34:255,100,0	0/1:19,24:45:255,0,225
-chr21	13301756	chr21:13301756:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,10:22:107,0,141	0/1:16,8:26:69,0,188	0/1:16,9:26:78,0,196
-chr21	13316249	chr21:13316249:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,21:47:254,0,255	0/1:20,17:38:189,0,250	0/1:22,20:42:240,0,255
-chr21	13330524	chr21:13330524:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<7.8>,<10.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,18,8:26:255,143,159,255,0,255	1/2:0,8,4:12:255,68,83,203,0,196	0/1:6,10,0:16:232,0,125,253,104,255
-chr21	13335024	chr21:13335024:M	TTTCTTTCTTTCTTTCTTTCTTTTTTTCT	<8.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:21,14:35:166,0,255	0/1:21,13:34:135,0,255	0/1:10,9:19:112,0,132
-chr21	13343201	chr21:13343201:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:23,0,23	1/1:1,6:8:92,7,0	0/1:6,6:12:66,0,67
-chr21	13346590	chr21:13346590:M	TTTTTTTTATTTATTATTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,8:15:174,0,145	0/1:10,12:22:255,0,204	0/1:5,16:21:255,0,72
-chr21	13355921	chr21:13355921:M	ATATACATATATATATATATATATATATATA	<12.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:7,1,11:22:211,113,255,0,147,109	0/1:2,12,0:17:255,0,3,164,36,158	1/2:0,9,7:17:255,81,33,117,0,67
-chr21	13355951	chr21:13355951:M	AGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGA	<31.5>,<67.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,4,4:10:85,37,22,61,0,117	2/2:0,0,4:4:51,51,51,11,11,0	0/0:0,0,0:3:0,5,19,6,24,32
-chr21	13358752	chr21:13358752:M	GAAAAAAAAAAAAAAAAAAACAAGAAAGAAAAGAAA	<6.6>,<6.8>	.	.	Motif=GAAAA	GT:AD:DP:PL	0/1:5,10,0:20:153,0,37,64,38,72	0/2:3,0,7:11:48,35,74,0,36,15	0/1:4,9,0:17:114,0,51,50,49,73
-chr21	13359519	chr21:13359519:M	CCCTGACCCTGACCCGTGACCCTGACCCTTAACCCCTGACCCTGACCCCTATCCCCTGACCCTGACCC	<4.7>,<8>	.	.	Motif=CCCTGA	GT:AD:DP:PL	0/2:7,0,4:11:64,85,246,0,161,149	0/0:6,0,0:6:0,18,156,18,156,156	0/1:7,3,1:11:41,0,152,40,138,198
-chr21	13363222	chr21:13363222:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:25:139,0,158	0/1:13,18:35:226,0,148	0/1:10,9:20:103,0,130
-chr21	13381720	chr21:13381720:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,14,0:25:255,0,218,255,255,255	1/1:1,21,0:22:255,38,0,255,63,255	1/2:0,13,11:25:255,255,255,255,0,255
-chr21	13384063	chr21:13384063:M	TATACATATATATATACACACATATATATGTGTGTATATATATATACACACACATATATATATATAT	<34.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,6:16:16,0,32	0/1:4,2:7:7,0,16	1/1:1,4:7:40,8,0
-chr21	13384129	chr21:13384129:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,7,0:26:38,0,76,86,142,255	0/1:19,5,0:28:3,0,116,77,197,255	1/2:0,7,13:31:255,255,255,100,0,154
-chr21	13389552	chr21:13389552:M	TATATATATATATATATATATATATATATACATATA	<8>,<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,10,2:23:208,0,244,217,91,255	0/1:1,4,0:6:94,0,13,96,11,105	1/2:0,12,11:24:255,124,237,255,0,255
-chr21	13389637	chr21:13389637:M	AACAAAACAAAGCAAA	<2.2>	.	.	Motif=AACAA	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:27,0:27:0,79,255	0/1:11,28:39:255,0,90
-chr21	13392823	chr21:13392823:M	TGTTTGTTTGTTTGTTTGTTT	<4.2>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:26,0:26:0,77,255	0/1:12,10:22:124,0,161
-chr21	13393041	chr21:13393041:M	CACACCACATACACATACACACACACACACACACACACACACACACACA	<21.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:4,0,10:14:137,177,255,0,71,30	0/2:9,0,14:24:167,236,255,0,169,99	1/2:0,7,8:15:255,137,187,218,0,182
-chr21	13405436	chr21:13405436:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:40:0,118,255	0/0:44,0:45:0,132,255	0/1:20,17:37:206,0,255
-chr21	13409899	chr21:13409899:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<19>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,2,0:13:2,0,59,10,46,83	0/2:3,0,3:7:25,41,99,0,31,20	1/2:0,11,1:21:162,36,15,164,0,255
-chr21	13409934	chr21:13409934:M	GAGAGAGAGAGAGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<22>,<28>	.	.	Motif=GA	GT:AD:DP:PL	0/2:8,0,7:18:171,197,255,0,178,174	0/2:1,0,2:5:58,61,81,0,22,16	1/2:0,4,3:12:197,88,71,116,0,115
-chr21	13425654	chr21:13425654:M	CACACACACACACACACACACACACACACACACACACACAC	<14.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,16,0:27:255,0,188,255,242,255	0/1:15,19,0:39:255,0,255,255,255,255	1/2:0,18,15:36:255,255,255,255,0,255
-chr21	13431318	chr21:13431318:M	AAAAGAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:18:87,0,96	0/1:12,7:19:58,0,140	1/1:1,19:21:255,44,0
-chr21	13431490	chr21:13431490:M	AGAAAAAAAAAGAAAAGAAA	<4.2>	.	.	Motif=AGAAA	GT:AD:DP:PL	0/0:34,9:43:0,30,197	0/0:31,5:36:0,45,205	0/1:22,14:36:25,0,88
-chr21	13432655	chr21:13432655:M	AGAGAGAGAGAGAGAGAGAGAGAGAGA	<9.5>,<12.5>	.	.	Motif=AG	GT:AD:DP:PL	0/2:17,0,11:31:86,173,255,0,255,181	0/2:10,0,13:28:125,193,255,0,144,75	1/2:1,14,22:48:255,197,255,215,0,255
-chr21	13434213	chr21:13434213:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,2,9:28:66,73,255,0,191,144	0/2:12,0,10:27:56,107,255,0,208,140	1/2:3,26,16:46:255,124,124,255,0,219
-chr21	13435224	chr21:13435224:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,15,1:45:226,0,255,168,255,255	0/1:38,13,3:56:147,0,255,118,255,255	0/2:26,13,24:64:255,80,255,0,170,158
-chr21	13438466	chr21:13438466:M	AAAAAAAAAAAAAAAA	<13>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,6:20:38,95,255,0,176,121	0/2:10,0,5:18:40,90,255,0,145,96	0/1:14,8,6:29:147,0,255,125,118,255
-chr21	13440249	chr21:13440249:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,1:39:0,96,255	0/0:34,1:35:0,85,255	0/1:12,12:24:148,0,149
-chr21	13444327	chr21:13444327:M	AACAACAACAACAACAACAA	<6.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:8,7:18:28,0,28	0/1:20,17:41:70,0,73	0/1:17,11:29:27,0,75
-chr21	13448839	chr21:13448839:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,3:18:12,0,195	0/0:21,3:25:0,21,255	0/1:10,9:22:134,0,114
-chr21	13449197	chr21:13449197:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,5:10:54,69,195,0,83,55	0/2:3,1,7:11:90,77,148,0,32,17	0/1:4,3,1:8:59,0,87,34,50,77
-chr21	13449686	chr21:13449686:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,2:8:13,0,70,0,25,70	0/2:7,0,4:12:37,68,201,0,99,87	0/1:2,6,0:8:82,0,12,104,30,182
-chr21	13458146	chr21:13458146:M	ATAATAATAATAATAATAATAATAATGATAA	<11.3>	.	.	Motif=ATA	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/1:12,10:22:115,0,151	0/0:26,0:26:0,77,255
-chr21	13461891	chr21:13461891:M	AAAAAAAAAAAAGAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,1:33:0,80,255	0/0:36,2:40:0,82,255	0/1:18,8:31:41,0,198
-chr21	13467543	chr21:13467543:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:39:0,117,255	0/1:32,12:46:191,0,255	0/0:45,0:47:0,138,255
-chr21	13468039	chr21:13468039:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/0:31,2:34:0,65,255	0/1:17,14:33:152,0,217
-chr21	13468346	chr21:13468346:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,51,255	0/1:5,4:10:77,0,104	0/0:11,0:11:0,33,255
-chr21	13472158	chr21:13472158:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/0:30,0:30:0,90,255	0/1:20,24:45:255,0,255
-chr21	13474558	chr21:13474558:M	AAAAAAAAAAAAAAA	<16>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/3:11,0,1,5:17:109,132,255,72,255,255,0,197,255,255	1/2:1,9,9,1:20:255,146,109,114,0,111,255,114,148,255	0/0:22,1,1,0:28:0,50,255,49,255,255,70,255,255,255
-chr21	13476731	chr21:13476731:M	TTTTTTCTTTTTCTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:27:0,73,255	0/1:12,15:28:180,0,138	0/0:32,1:33:0,79,255
-chr21	13478586	chr21:13478586:M	CACACACACACACACACACACACACACACACA	<17>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,13:32:88,0,135	1/1:2,31:35:255,61,0	0/0:22,1:28:0,62,255
-chr21	13481274	chr21:13481274:M	TGTGTCTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:15,0,5,0:21:98,133,255,0,255,255,141,255,255,255	2/3:0,0,5,4:12:255,255,246,109,104,84,158,135,0,141	0/1:18,10,0,0:31:211,0,255,255,255,255,255,255,255,255
-chr21	13482544	chr21:13482544:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,0,15:30:186,231,255,0,255,178	1/2:0,23,14:41:255,204,124,255,0,255	0/0:32,0,4:36:0,96,255,35,255,255
-chr21	13485069	chr21:13485069:M	AAGAAGAAGAAGAAGAAG	<8>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:11,10:22:130,0,149	0/1:15,10:28:109,0,232	0/1:29,14:48:143,0,255
-chr21	13487504	chr21:13487504:M	AAAAGAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,1:47:0,118,255	0/1:28,15:44:120,0,255	0/0:42,1:46:0,114,255
-chr21	13489516	chr21:13489516:M	ACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,20:33:212,0,104	0/1:11,18:29:184,0,80	0/1:17,18:36:169,0,162
-chr21	13490554	chr21:13490554:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<8.5>,<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,2,12,2:20:255,209,184,33,13,0,241,146,17,216	1/2:0,6,7,0:13:255,113,75,97,0,59,255,93,96,244	2/3:0,0,4,3:7:175,134,122,48,47,28,65,54,0,45
-chr21	13490611	chr21:13490611:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:21:123,24,0	0/1:3,6:10:34,0,13	1/1:0,0:6:34,10,0
-chr21	13492464	chr21:13492464:M	ACACACACACACACACACACACACACACACACAGAGAGACACACACA	<24.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,11,1:22:116,0,55,112,52,255	2/2:0,0,6:8:203,203,203,24,24,0	0/1:22,9,0:34:38,0,255,138,255,255
-chr21	13499795	chr21:13499795:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/1:15,16:31:194,0,175	0/1:19,15:36:190,0,243
-chr21	13501779	chr21:13501779:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:15,8:25:64,0,202	0/0:22,1:25:0,55,255
-chr21	13502393	chr21:13502393:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:1,16,77,0,53,50	1/2:1,2,3:6:47,33,66,17,0,40	0/1:3,3,0:7:38,0,27,56,39,123
-chr21	13506423	chr21:13506423:M	TATACATATACATACTTACATATGTATAATACATATACATA	<2.3>	.	.	Motif=TATACA	GT:AD:DP:PL	0/1:19,11:30:193,0,255	0/1:12,5:17:74,0,250	0/1:28,4:32:3,0,255
-chr21	13507637	chr21:13507637:M	CTTTCTTTCTTTC	<2.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:17,16:33:212,0,232	0/1:20,20:40:246,0,245	0/0:40,0:40:0,118,255
-chr21	13510435	chr21:13510435:M	TATATATATATATATATATATATATAT	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,22:30:185,5,0	1/1:1,9:12:112,21,0	1/1:4,20:26:166,3,0
-chr21	13518477	chr21:13518477:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:8:0,21,182	1/1:0,8:10:231,24,0	0/1:3,5:10:136,0,57
-chr21	13524301	chr21:13524301:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:6,0,72	1/1:0,15:18:198,39,0	0/1:7,6:17:55,0,54
-chr21	13535924	chr21:13535924:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,4:45:0,58,255	0/1:15,18:35:223,0,170	0/0:34,1:36:0,87,255
-chr21	13555888	chr21:13555888:M	TATATATATATATATATATATATATATATA	<12>,<19>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,0,3:10:64,85,255,0,195,186	1/1:0,3,0:3:94,9,0,94,9,94	0/0:5,0,0:7:0,17,158,15,156,155
-chr21	13566921	chr21:13566921:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:24,0,26:51:255,255,255,0,255,255	1/2:1,24,21:47:255,255,255,255,0,255	0/0:40,0,1:41:0,121,255,102,255,255
-chr21	13585167	chr21:13585167:M	AAAAAAAAAAAAAAAAGAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:21:145,0,255	0/1:8,5:14:98,0,185	0/0:13,0:17:0,47,255
-chr21	13595695	chr21:13595695:M	TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTATTTT	<9.8>,<10.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	2/2:0,0,8:9:155,155,155,24,23,0	1/1:0,3,0:5:92,10,0,65,10,57	2/2:0,0,6:6:113,113,113,18,18,0
-chr21	13597040	chr21:13597040:M	CACACAGACACACACACACACACACACACACACACACACACACACA	<26>	.	.	Motif=CA	GT:AD:DP:PL	0/0:6,0:6:0,18,180	1/1:0,6:8:189,21,0	0/0:4,0:6:0,18,148
-chr21	13597248	chr21:13597248:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:8:0,0,68	1/1:0,0:1:2,1,0	0/1:7,3:10:21,0,88
-chr21	13602769	chr21:13602769:M	AAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAA	<34>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:7:90,29,75,56,0,60	2/2:0,0,1:1:14,17,26,3,3,0	1/2:1,1,3:5:41,29,78,8,0,12
-chr21	13603076	chr21:13603076:M	ACACACCACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,4:13:81,0,221	0/1:0,5:7:127,0,19	0/1:20,7:30:140,0,255
-chr21	13615824	chr21:13615824:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:22:84,0,185	0/0:22,1:24:0,53,255	0/1:6,13:21:185,0,57
-chr21	13616139	chr21:13616139:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:12,0,10:26:248,255,255,0,255,255	2/2:0,0,17:20:255,255,255,56,58,0	0/1:13,12,0:27:255,0,255,255,255,255
-chr21	13619420	chr21:13619420:M	AAAAAATAAAAATAAAAAACAAAACAAAAACAAAACAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	.	1/1:0,8:8:221,24,0
-chr21	13627446	chr21:13627446:M	AAAAAAACAAAAAAAAAAAAGAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:12,0,178	1/1:0,9:9:159,26,0	0/0:17,2:19:0,20,255
-chr21	13678394	chr21:13678394:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:205,35,0	.	0/1:1,4:5:55,0,2
-chr21	13711753	chr21:13711753:M	ATGCTTATGCTTAT	<1.7>	.	.	Motif=ATGCTT	GT:AD:DP:PL	0/0:11,1:12:0,8,255	0/1:8,3:11:52,0,186	0/0:11,0:11:0,33,255
-chr21	13782884	chr21:13782884:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.2>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:10,12:22:161,0,124	0/0:15,0:16:0,44,255	0/1:10,15:25:202,0,110
-chr21	13795297	chr21:13795297:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:91,9,0	0/0:1,0:2:0,3,28	0/1:1,1:3:20,0,23
-chr21	13809190	chr21:13809190:M	ATTATTATTATTATTATT	<6.3>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,16:37:9,0,27	0/0:38,3:45:0,60,166	1/1:0,26:33:88,28,0
-chr21	13809206	chr21:13809206:M	TTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,12:33:255,251,255,242,0,255	0/1:13,16,0:32:255,0,255,255,255,255	1/2:0,4,22:29:255,255,255,97,0,32
-chr21	13809599	chr21:13809599:M	TTTTTTTTTTGTCCTTTTTTTTTTTTTTTTTTT	<12>,<31>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,7:10:175,150,171,33,0,12	0/2:2,2,2:8:34,0,63,0,2,35	1/2:0,3,8:12:232,170,187,73,0,49
-chr21	13818174	chr21:13818174:M	TTTTTTTTTTTTCTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,20:37:255,255,255,255,0,255	1/2:1,17,20:39:255,255,255,255,0,255	2/2:1,0,38:39:255,255,255,97,117,0
-chr21	13827697	chr21:13827697:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,25:36:255,0,101	0/0:37,3:40:0,64,255	0/1:12,10:24:114,0,169
-chr21	13828862	chr21:13828862:M	TATATATATTATTAAATATATAT	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/0:31,3:34:0,23,255	0/1:14,5:19:72,0,255	0/0:30,2:32:0,43,255
-chr21	13829683	chr21:13829683:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:39:230,0,255	0/0:53,0:53:0,156,255	0/1:15,12:27:139,0,195
-chr21	13830168	chr21:13830168:M	ACACACACACACACCCATACTCACCCACCTACACACAGAAACACACCCACACACACAC	<10>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,7:23:118,0,255	0/1:22,5:27:53,0,255	0/1:18,6:24:86,0,255
-chr21	13836136	chr21:13836136:M	TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,11:22:252,0,187	0/0:9,0:10:0,30,255	0/1:9,5:15:109,0,201
-chr21	13873837	chr21:13873837:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,10:33:91,0,255	0/0:39,1:45:0,113,255	0/1:12,18:31:216,0,108
-chr21	13909190	chr21:13909190:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:14:0,8,158	0/1:8,4:14:23,0,107	0/0:20,3:24:0,12,255
-chr21	13912347	chr21:13912347:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,4:16:26,0,152	0/1:8,11:21:136,0,85	0/0:21,1:23:0,50,255
-chr21	13912519	chr21:13912519:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,12:25:182,0,87	0/1:6,8:17:109,0,62	0/1:7,3:10:23,0,92
-chr21	13914343	chr21:13914343:M	TTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,6:8:135,0,12	0/1:5,3:9:64,0,108	0/1:5,2:7:33,0,112
-chr21	13916535	chr21:13916535:M	AAAAAAAAAAAAAAAA	<15>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,17,5:27:255,109,68,255,0,255	1/2:0,8,8:20:255,197,179,147,0,213	1/2:0,16,5:24:255,129,88,255,0,255
-chr21	13925531	chr21:13925531:M	TTTTTTTTTTTGTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:18:128,0,74	0/1:11,10:22:107,0,133	0/1:11,9:20:101,0,135
-chr21	13934234	chr21:13934234:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,12:30:140,0,254	0/1:21,24:45:255,0,244	0/1:30,29:59:255,0,255
-chr21	13939365	chr21:13939365:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,20:48:255,0,255	0/1:14,19:35:255,0,255	0/1:23,22:46:255,0,255
-chr21	13940759	chr21:13940759:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,11:33:108,0,255	0/1:19,17:36:192,0,228	0/1:18,19:37:236,0,217
-chr21	13941491	chr21:13941491:M	TTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,10:20:255,250,211,191,0,150	1/2:0,13,3:26:255,78,26,255,0,255	1/2:0,12,14:29:255,255,255,255,0,251
-chr21	13943764	chr21:13943764:M	TTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,6:9:189,21,0	1/1:0,12:14:255,37,0
-chr21	13944986	chr21:13944986:M	AAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,16:37:255,0,255	0/1:13,12:26:255,0,255	0/1:8,21:34:255,0,130
-chr21	13963526	chr21:13963526:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,27:38:255,0,87	0/1:17,26:43:255,0,178	0/1:18,21:40:255,0,225
-chr21	13966218	chr21:13966218:M	TGTATGTGTATATGTGCATGTGTCTATGTGTATGTGTAT	<7.5>	.	.	Motif=TGTATG	GT:AD:DP:PL	0/1:19,18:37:231,0,252	0/1:15,4:19:15,0,212	0/1:20,11:31:111,0,255
-chr21	13973878	chr21:13973878:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<20>	.	.	Motif=TG	GT:AD:DP:PL	0/1:13,14,0:31:255,0,255,255,255,255	0/2:10,0,6:17:52,102,255,0,179,133	0/1:11,18,0:32:255,0,255,255,208,255
-chr21	13981522	chr21:13981522:M	CCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,1:1:28,3,0	.	1/1:0,3:4:100,12,0
-chr21	13998484	chr21:13998484:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,34:38:255,255,255,97,72,0	1/2:1,31,15:47:255,235,118,255,0,255	1/2:2,21,23:47:255,255,255,255,0,254
-chr21	13999108	chr21:13999108:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1:34:0,83,255	0/1:27,10:38:41,0,255	0/0:29,1:33:0,79,255
-chr21	14000638	chr21:14000638:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:29:255,77,0	1/1:0,20:26:255,65,0	1/1:0,17:20:255,56,0
-chr21	14003480	chr21:14003480:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:18:255,34,0	1/1:1,30:33:255,79,0	1/1:1,31:32:255,76,0
-chr21	14019889	chr21:14019889:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:245,0,255	1/1:0,37:37:255,109,0	0/0:38,1:41:0,102,255
-chr21	14025002	chr21:14025002:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:34:172,0,245	1/1:3,32:36:255,52,0	0/0:38,0:40:0,115,255
-chr21	14029013	chr21:14029013:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:24:150,0,107	1/1:5,32:38:255,28,0	0/0:22,4:30:0,3,255
-chr21	14031160	chr21:14031160:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:8,0,4:14:84,92,255,0,211,200	1/2:0,5,2:8:171,44,29,112,0,102	0/0:9,0,0:9:0,27,250,27,251,252
-chr21	14047139	chr21:14047139:M	GAGTGGAGTGGAGTGGAGTGGAGAGTGGAGTGGAGTGGAGCGGAGCGGAGCAGAGTGGAGTGGAGTGGA	<14.8>	.	.	Motif=GAGTG	GT:AD:DP:PL	0/1:4,5:9:65,0,47	0/0:15,0:15:0,44,255	0/1:2,7:9:100,0,10
-chr21	14058640	chr21:14058640:M	GGCCAGGGCCAGGGCACAGGCAGGGGCAGGGCCTGGATAAGGGCAGGGTCAGGGATATGGCAGGACCAGGGTCCAGGCCAGGGCCAGGGTCCAGG	<3.3>	.	.	Motif=GGCCAG	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,29:29:255,87,0	1/1:0,32:32:255,96,0
-chr21	14060241	chr21:14060241:M	CCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	0/1:3,1:5:4,0,53	0/0:6,0:6:0,18,106	0/1:1,4:5:58,0,4
-chr21	14062713	chr21:14062713:M	GGGGGGGGGGG	<10>,<12>	.	.	Motif=G	GT:AD:DP:PL	1/2:0,1,1:2:30,17,23,17,0,23	1/1:0,6,0:6:102,18,0,118,18,172	0/2:2,0,4:7:52,69,132,0,29,17
-chr21	14065631	chr21:14065631:M	TATATATATATATATATATATATATATATATATATATATATATAT	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,3:5:155,15,0	1/1:0,1:3:27,3,0	1/1:0,2:2:55,6,0
-chr21	14079985	chr21:14079985:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:27:167,0,175	0/0:36,2:38:0,76,255	0/1:20,21:42:255,0,244
-chr21	14081510	chr21:14081510:M	TTATTATTATTATTA	<6>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:33,6:39:0,21,255	0/1:8,5:13:36,0,80	0/0:30,0:30:0,86,255
-chr21	14081523	chr21:14081523:M	TAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA	<12.7>,<13.7>	.	.	Motif=TAG	GT:AD:DP:PL	0/0:31,0,0:34:0,102,255,102,255,255	0/2:7,1,14:26:255,172,255,0,198,184	0/1:24,14,0:38:231,0,255,185,255,255
-chr21	14085976	chr21:14085976:M	TTTTTTTTTTTTTTCTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:22:84,0,175	0/0:30,0:31:0,88,255	0/1:13,13:28:161,0,161
-chr21	14088389	chr21:14088389:M	AATATAATTAAAAATATAATATATAATTATAAATATAGTATATAATTATAATTATA	<7.3>	.	.	Motif=AATATA	GT:AD:DP:PL	1/1:0,5:5:131,15,0	1/1:0,1:1:26,3,0	1/1:0,0:1:3,1,0
-chr21	14094056	chr21:14094056:M	AATAAATAAATAAATAAATAAATAAATAAATAAAT	<6.8>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,14:18:255,50,0	1/1:0,7:10:174,26,0	1/1:0,0:4:9,3,0
-chr21	14094088	chr21:14094088:M	AATTAATTAATTAATTTAATT	<2.2>,<7.2>,<8.2>	.	.	Motif=AATT	GT:AD:DP:PL	2/3:0,0,13,14:27:255,255,255,230,230,151,213,214,0,135	1/2:0,2,8,0:10:255,206,210,76,0,52,200,125,75,178	1/3:0,7,0,8:15:255,215,194,255,128,255,255,0,255,238
-chr21	14095297	chr21:14095297:M	TTTTTTTGTTTGTTTTTTGCTTTTTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,0:21:45,0,250	0/1:3,4:11:103,0,68	0/1:1,2:8:77,0,15
-chr21	14097272	chr21:14097272:M	TTTTTTATTTTTATTTTTATTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:29:200,0,183	0/1:10,9:19:106,0,124	1/1:0,21:21:255,62,0
-chr21	14100420	chr21:14100420:M	AAAAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20,0:34:255,0,255,255,255,255	0/2:12,3,15:31:255,206,255,0,255,255	1/2:0,16,16:33:255,255,190,255,0,202
-chr21	14100728	chr21:14100728:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/1:12,10:24:71,0,110	0/0:12,0:14:0,37,169	1/1:3,17:20:188,16,0
-chr21	14102653	chr21:14102653:M	AAAAAAAGAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:30:117,0,255	0/1:16,11:27:115,0,205	1/1:0,36:36:255,106,0
-chr21	14106744	chr21:14106744:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,16,10:27:255,166,213,255,0,255	0/1:11,19,0:30:247,0,106,255,163,255	0/2:12,0,11:23:132,197,255,0,183,150
-chr21	14107600	chr21:14107600:M	ACTCACTCACT	<1.8>	.	.	Motif=ACTC	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/1:9,19:28:255,0,81	0/1:23,25:48:255,0,255
-chr21	14110338	chr21:14110338:M	ATTTTTTTATTTATTTGTTTATTT	<5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:29,17:46:191,0,255	0/1:16,17:33:210,0,191	0/0:38,0:38:0,112,255
-chr21	14111844	chr21:14111844:M	TTTTGTTTTGTTTT	<2.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:26,17:43:255,0,255	1/1:0,39:39:255,117,0	0/1:25,23:48:255,0,255
-chr21	14114178	chr21:14114178:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,1,15:26:202,242,255,0,113,103	1/2:1,13,11:25:255,173,240,207,0,255	0/1:12,9,1:22:98,0,162,142,164,255
-chr21	14116010	chr21:14116010:M	GTGTGTGGGAGTGTGTGGGTGTGTGTG	<8.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:15,15:30:255,0,255	0/1:14,17:31:255,0,255
-chr21	14129799	chr21:14129799:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:3:26,7,0	1/1:0,3:5:46,12,0	1/1:0,0:2:14,5,0
-chr21	14129810	chr21:14129810:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:42:255,0,255	0/0:30,0:31:0,90,255	0/1:20,28:51:255,0,255
-chr21	14138203	chr21:14138203:M	AAAAATAAAAATAAA	<2.7>	.	.	Motif=AAAAAT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:19,12:31:214,0,255	0/1:32,20:52:255,0,255
-chr21	14141387	chr21:14141387:M	TTTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,24,18:42:255,255,220,255,0,255	0/1:17,17,0:36:255,0,255,255,255,255	0/2:22,2,23:50:255,255,255,0,255,255
-chr21	14141628	chr21:14141628:M	TTGTTGTTGTTTTGTTGT	<5>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,44:44:255,129,0	0/1:20,9:29:69,0,255	0/1:19,13:32:134,0,239
-chr21	14152072	chr21:14152072:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:10,11:21:150,0,131	0/0:6,0:6:0,18,109	0/1:6,7:13:93,0,74
-chr21	14163093	chr21:14163093:M	TATATATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,48:49:255,145,0	0/1:16,21:38:255,0,195	0/1:32,28:60:255,0,255
-chr21	14174541	chr21:14174541:M	TTTATTTTATTTTATTTTATTTTATTTT	<6.6>	.	.	Motif=TTTAT	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:14,14:28:174,0,174	0/1:14,13:27:167,0,186
-chr21	14176176	chr21:14176176:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:20:105,0,141	1/1:0,14:14:242,41,0	0/1:12,7:20:76,0,155
-chr21	14176722	chr21:14176722:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:50:0,150,255	0/1:13,12:26:255,0,255	0/1:21,15:40:255,0,255
-chr21	14185883	chr21:14185883:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:45:0,134,255	0/1:17,18:36:255,0,255	0/1:18,13:33:255,0,255
-chr21	14191377	chr21:14191377:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:10:82,0,27	0/1:4,4:11:65,0,37	0/1:8,8:17:100,0,91
-chr21	14196127	chr21:14196127:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,18:19:255,55,0	1/1:0,27:27:255,79,0
-chr21	14196156	chr21:14196156:M	AAAAAAAAAAAACAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,1,3:25:17,36,255,0,255,255	1/2:0,7,4:16:255,76,34,152,0,117	0/1:23,6,1:31:97,0,255,96,255,255
-chr21	14197027	chr21:14197027:M	ACACACACACACACACACACACATACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:8,15:23:201,0,75	0/1:13,21:34:255,0,140
-chr21	14202992	chr21:14202992:M	AAACAAACAAAC	<2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:47,0:50:0,142,255	0/1:16,18:35:230,0,202	0/1:27,25:55:255,0,255
-chr21	14203857	chr21:14203857:M	AGAAAGAAAGAAA	<5.2>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:21,15:37:255,0,255	1/1:0,40:40:255,120,0	0/1:17,19:36:255,0,255
-chr21	14213003	chr21:14213003:M	ATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:11,8:19:203,0,254	0/1:28,12:40:255,0,255
-chr21	14213292	chr21:14213292:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	<12.8>,<13.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:0,4,7:11:247,130,100,64,0,43	2/2:0,0,15:16:255,255,255,45,44,0	1/2:0,9,7:16:255,126,82,140,0,119
-chr21	14214810	chr21:14214810:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:41:0,102,255	0/1:23,26:51:255,0,255	0/1:22,19:41:228,0,255
-chr21	14226620	chr21:14226620:M	AAAAAAAAAAAAAAAACAAACAAAAA	<25>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3,0:14:13,0,158,53,167,242	0/1:9,14,1:25:178,0,91,227,112,255	0/2:9,2,8:20:94,112,255,0,99,123
-chr21	14232691	chr21:14232691:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:33:0,77,255	0/1:12,13:27:152,0,136	0/0:27,1:33:0,75,255
-chr21	14235342	chr21:14235342:M	AAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1,0:45:0,114,255,135,255,255	0/2:20,0,7:27:119,178,255,0,255,255	0/1:24,14,0:39:150,0,255,255,255,255
-chr21	14235352	chr21:14235352:M	AGAGAGAGAGAGAGAGA	<9>	.	.	Motif=AG	GT:AD:DP:PL	0/0:40,0:41:0,79,226	0/0:33,0:34:0,66,187	0/1:20,14:36:14,0,46
-chr21	14243225	chr21:14243225:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/2:7,0,7:15:180,200,255,0,190,170	0/1:6,5,0:12:108,0,153,133,173,255	2/2:0,0,9:10:255,255,255,27,27,0
-chr21	14243744	chr21:14243744:M	GAAAGAAAGAGAGAAA	<3.5>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:21,17:38:255,0,255	0/0:32,0:32:0,96,255	1/1:0,38:38:255,114,0
-chr21	14250797	chr21:14250797:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:21:0,43,255	0/0:15,2:20:0,23,250	0/1:12,10:24:113,0,152
-chr21	14253390	chr21:14253390:M	TAAATAAATAAA	<2.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/0:37,0:37:0,106,255	0/0:50,0:50:0,144,255	0/1:24,23:51:197,0,249
-chr21	14254070	chr21:14254070:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/0:16,0,1:17:0,48,255,33,255,255	0/2:7,0,3:10:20,41,213,0,112,85	0/1:8,7,0:16:165,0,175,123,130,213
-chr21	14254572	chr21:14254572:M	ATATATATAATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/0:32,0:32:0,94,255	0/1:26,16:42:183,0,255
-chr21	14256500	chr21:14256500:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,3:19:28,0,255	0/0:23,0:23:0,69,255	1/1:0,13:15:255,41,0
-chr21	14257908	chr21:14257908:M	TTTCTTTGTTTCTTTCTTT	<6.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:11,4:17:52,0,226	0/0:12,0:12:0,36,255	1/1:0,15:19:255,31,0
-chr21	14258823	chr21:14258823:M	CAAAACAAAACAAAACAAACAAAA	<5>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/1:9,20:32:66,4,0	0/0:37,0:38:0,76,226	1/1:0,36:38:219,74,0
-chr21	14268220	chr21:14268220:M	ATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:14,20:34:255,0,171	0/1:8,13:21:179,0,84	0/1:21,9:30:84,0,255
-chr21	14270958	chr21:14270958:M	TATATATATATATATATATA	<13>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,8:34:164,0,255	0/0:21,0:26:0,57,255	0/1:1,7:24:239,0,5
-chr21	14270998	chr21:14270998:M	TATATATATATAATATA	<9.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,5,3:28:17,0,165,17,204,255	0/0:31,1,0:32:0,76,255,93,255,255	1/2:0,8,6:14:195,71,33,76,0,58
-chr21	14276705	chr21:14276705:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9,0:9:164,27,0,164,27,164	1/1:0,8,1:9:149,26,0,123,9,120	1/2:1,7,4:12:186,53,36,87,0,100
-chr21	14277463	chr21:14277463:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:38:0,83,255	0/1:20,10:31:82,0,255	0/1:18,6:33:64,0,253
-chr21	14291384	chr21:14291384:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:10:49,0,61	0/0:11,0:12:0,35,198	0/1:7,11:20:165,0,65
-chr21	14291457	chr21:14291457:M	GTGTGTGTGTGTGTGTGTGTGTGT	<8>,<14>,<15>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,20,1,14,0:35:255,255,255,255,245,255,255,0,255,255,255,255,255,255,255	3/4:0,0,2,10,10:22:255,255,255,255,255,255,179,179,142,115,199,201,115,0,141	1/2:0,19,19,0,0:40:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
-chr21	14292535	chr21:14292535:M	TGAATGAATGAATGAATGAATGAA	<7>	.	.	Motif=TGAA	GT:AD:DP:PL	0/1:21,23:44:255,0,255	0/1:12,16:28:208,0,136	0/1:22,18:40:221,0,255
-chr21	14295225	chr21:14295225:M	ACACACACACACATGCACACACACACGCACACACACACACATACACATATATATACACACACACACAC	<35>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,12:12:225,35,0	1/1:1,10:11:159,15,0	1/1:0,12:12:219,35,0
-chr21	14296463	chr21:14296463:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:38:255,92,0	1/1:0,34:36:255,105,0	1/1:1,33:35:255,84,0
-chr21	14297077	chr21:14297077:M	TTTATTTGTTTATTTACTTATTTTTATTTTTTATTTATTTATTATTTATTTATTTATTTATTCATTCATTTATTTATTTATTTATTT	<19.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:4,2:6:39,0,95	1/1:0,1:2:28,3,0	1/1:0,3:3:84,9,0
-chr21	14298756	chr21:14298756:M	ATATATATATATATATAT	<8>,<10.5>,<12>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,0,7,10:22:255,255,255,194,210,153,139,196,0,152	1/3:0,16,0,5:21:255,139,93,255,98,255,248,0,255,255	0/2:10,1,12,0:23:176,224,255,0,131,151,209,255,215,255
-chr21	14303560	chr21:14303560:M	AAAAAAAAAAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<40>,<44>,<51>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,9,5:14:255,255,255,134,135,108,245,245,0,230	1/3:0,11,0,4:15:255,105,74,255,107,255,255,0,255,255	2/3:0,0,1,5:8:175,177,179,132,134,125,45,45,0,30
-chr21	14304123	chr21:14304123:M	TGTGTGTGTGTGTGTGTGTGTGTGTTGTTTGTTTGTATGTGTG	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:14,0,24:38:255,255,255,0,255,153	0/1:10,11,0:22:255,0,224,255,175,255	0/2:16,0,18:34:231,255,255,0,255,195
-chr21	14312436	chr21:14312436:M	ACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:24,15:40:255,0,255	0/0:38,0:38:0,114,255	0/1:20,14:34:255,0,255
-chr21	14327266	chr21:14327266:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,22:38:255,0,186	0/0:21,2:24:0,35,255	0/1:9,16:26:226,0,88
-chr21	14340482	chr21:14340482:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:38:255,0,221	0/0:40,1:42:0,103,255	0/1:17,14:32:160,0,230
-chr21	14345905	chr21:14345905:M	AAGGAAGGAAGGAAGGAAGGAAGG	<7>	.	.	Motif=AAGG	GT:AD:DP:PL	1/1:2,8:10:76,3,0	0/0:18,2:20:0,31,196	1/1:0,11:11:137,30,0
-chr21	14351353	chr21:14351353:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,16:24:225,0,76	0/0:20,3:24:0,18,255	0/1:12,16:30:220,0,129
-chr21	14351997	chr21:14351997:M	ATATATATATATATATAATATATATATATA	<14>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:2,4:6:55,0,18	1/1:0,23:23:255,68,0
-chr21	14355255	chr21:14355255:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<16>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:3,7:11:104,0,22	1/1:0,14:14:241,41,0	1/1:0,13:14:239,41,0
-chr21	14366385	chr21:14366385:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:11,10:22:122,0,130	0/0:41,2:44:0,93,255
-chr21	14366686	chr21:14366686:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:23:0,49,255	0/1:9,9:18:102,0,102	0/0:20,1:22:0,46,255
-chr21	14369241	chr21:14369241:M	CCAGCCCAGCC	<2>	.	.	Motif=CCAGC	GT:AD:DP:PL	0/1:14,16:30:255,0,255	0/1:19,17:36:255,0,255	0/0:37,0:37:0,111,255
-chr21	14378625	chr21:14378625:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:36:0,106,255	0/1:17,8:26:147,0,255	0/0:32,0:34:0,101,255
-chr21	14389997	chr21:14389997:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12>,<16>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,24,0,11:36:255,201,234,255,191,255,255,0,255,255	1/2:0,16,16,0:32:255,255,255,255,0,255,255,255,255,255	3/3:0,0,4,24:28:255,255,255,255,255,255,82,84,10,0
-chr21	14391124	chr21:14391124:M	TTTGTTTGTTTGTTTG	<3>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:42,0:44:0,115,255	0/1:25,19:47:232,0,255	0/0:50,0:54:0,127,255
-chr21	14391868	chr21:14391868:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,5:41:0,36,255	0/1:15,6:22:30,0,143	0/0:31,4:35:0,44,255
-chr21	14394492	chr21:14394492:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:15:0,39,255	0/1:9,4:14:76,0,196	0/0:11,0:13:0,36,255
-chr21	14394572	chr21:14394572:M	GGGAGAGGGAGAGAGAGAG	<2.2>	.	.	Motif=GGGAGA	GT:AD:DP:PL	0/1:13,17:30:240,0,161	1/1:0,51:51:255,150,0	0/0:26,0:27:0,77,255
-chr21	14395059	chr21:14395059:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:38:213,0,255	0/1:14,18:36:241,0,151	0/0:42,2:46:0,89,255
-chr21	14396299	chr21:14396299:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,25:55:255,0,255	1/1:0,45:46:255,135,0	0/0:42,3:45:0,78,255
-chr21	14403219	chr21:14403219:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,25:38:255,0,131	0/1:17,13:31:139,0,218	0/0:29,1:30:0,70,255
-chr21	14403381	chr21:14403381:M	TTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTGTATTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:37,0,20	1/1:1,7:8:101,7,0	0/0:14,0:14:0,41,243
-chr21	14405802	chr21:14405802:M	TATTTACTTATTTATTT	<3.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:15,27:42:255,0,255	0/1:31,23:55:255,0,255	0/0:45,0:46:0,135,255
-chr21	14405812	chr21:14405812:M	TTTATTTTTATTTT	<1.7>	.	.	Motif=TTTATT	GT:AD:DP:PL	0/1:16,27:43:255,0,255	0/1:32,25:57:255,0,255	0/0:46,0:46:0,138,255
-chr21	14413530	chr21:14413530:M	TATTTTTATTTTATTTT	<3.5>	.	.	Motif=TATTTT	GT:AD:DP:PL	0/1:18,21:39:255,0,255	0/1:16,18:34:255,0,255	0/0:52,0:52:0,156,255
-chr21	14425316	chr21:14425316:M	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTATTTT	<7.6>,<8.6>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/2:0,17,10:27:255,189,113,255,0,248	1/2:0,10,7:17:255,126,77,179,0,131	0/2:12,0,9:21:196,166,255,0,255,255
-chr21	14429727	chr21:14429727:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:42:255,0,255	0/1:18,10:35:232,0,255	0/1:17,23:41:255,0,255
-chr21	14433765	chr21:14433765:M	ACAAACAAACAAACAAAC	<4.8>	.	.	Motif=ACAA	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,38:38:255,114,0	0/1:18,24:42:255,0,255
-chr21	14436442	chr21:14436442:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:23,3,0	1/1:0,4:4:137,12,0	1/1:0,0:1:22,3,0
-chr21	14436859	chr21:14436859:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,1:2:39,15,12,17,0,12	1/2:0,1,4:5:79,55,52,16,0,2	1/2:1,3,5:9:125,55,71,34,0,26
-chr21	14438576	chr21:14438576:M	AAAAAAAAAAAAAAAAAA	<19>,<21>,<22>,<25>	.	.	Motif=A	GT:AD:DP:PL	2/4:0,0,5,0,7:12:255,255,255,198,198,183,255,255,198,255,148,143,0,89,127	3/4:0,0,1,3,3:8:195,194,193,127,127,116,93,93,76,82,102,101,34,0,90	1/2:0,9,8,0,0:20:255,216,188,150,0,221,255,143,255,255,255,228,255,255,255
-chr21	14449137	chr21:14449137:M	TCTTTCTTTCTTTCTTTCTTT	<7.2>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:11,7:22:120,0,255	0/1:11,6:21:93,0,255	0/0:25,0:27:0,75,255
-chr21	14449155	chr21:14449155:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,5:14:97,0,168	0/1:9,6:18:104,0,200	0/1:13,0:20:1,0,255
-chr21	14451021	chr21:14451021:M	TTCTTCTCCTTCATTCTTCT	<6.3>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:22,19:41:255,0,255	0/1:21,19:40:255,0,255	0/0:43,0:43:0,129,255
-chr21	14452766	chr21:14452766:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,15:21:217,0,21	0/1:15,6:21:41,0,196	0/1:8,13:23:164,0,87
-chr21	14476391	chr21:14476391:M	AGAGAGAAAGAAAGAGAGAGAGAGA	<67.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:17,4:21:0,22,255	0/1:13,8:21:19,0,255	0/0:45,0:45:0,135,255
-chr21	14487330	chr21:14487330:M	TTTATCTTATTTATTTTTTAT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:24,16:44:34,0,126	1/1:0,20:22:158,37,0	0/0:44,0:45:0,106,255
-chr21	14487348	chr21:14487348:M	TATATATATATAT	<7.5>,<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:25,5,13:43:236,233,255,0,255,255	1/2:0,6,15:21:255,255,255,93,0,115	0/0:45,0,0:46:0,131,255,136,255,255
-chr21	14493575	chr21:14493575:M	ACACACACACACACACACACACACACACACACACACACA	<16.5>,<20.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,8,0:19:255,139,189,255,0,255,255,139,255,255	1/3:0,13,2,8:23:255,216,207,255,100,255,255,0,255,255	0/2:8,0,5,1:15:55,96,255,0,147,107,55,255,130,255
-chr21	14499492	chr21:14499492:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,10:34:255,180,95,255,0,255	1/2:0,18,15:34:255,255,159,255,0,223	2/2:0,3,31:36:255,255,255,101,46,0
-chr21	14507839	chr21:14507839:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11,0:24:136,0,173,203,206,255	0/1:19,14,1:37:174,0,240,254,255,255	0/2:19,1,17:39:210,255,255,0,255,247
-chr21	14513502	chr21:14513502:M	TGTGTGTGTTTGTGTGTGCGTGTGTGTGTGTCTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:28,19:47:227,0,255	0/1:8,20:28:255,0,62	0/1:19,12:31:134,0,255
-chr21	14521901	chr21:14521901:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,38:41:255,65,0	1/1:2,33:35:255,68,0	0/1:23,25:50:255,0,255
-chr21	14527761	chr21:14527761:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:21,0,49	0/1:1,4:7:117,0,9	0/1:0,3:4:76,0,5
-chr21	14530317	chr21:14530317:M	AAAAAAAAAAAAAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:7:85,0,15	1/1:0,1:2:32,4,0	0/0:4,0:7:0,21,161
-chr21	14534517	chr21:14534517:M	TTTTTTTCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,2:23:0,31,255	0/0:20,3:23:0,15,255	0/1:19,18:38:217,0,245
-chr21	14541324	chr21:14541324:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,14:37:255,0,255	0/1:14,22:37:255,0,255	0/1:14,17:35:255,0,255
-chr21	14541988	chr21:14541988:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:21,1,17:40:255,255,255,0,255,255	0/2:19,1,18:39:255,255,255,0,255,255	0/1:24,21,2:49:255,0,255,255,255,255
-chr21	14545537	chr21:14545537:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/0:31,1:32:0,76,255	0/1:29,21:50:237,0,255
-chr21	14546670	chr21:14546670:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,27:42:255,0,139	0/1:19,24:48:255,0,214	0/1:22,23:45:255,0,255
-chr21	14549929	chr21:14549929:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:41:0,120,255	0/0:38,0:41:0,119,255	0/1:19,15:35:255,0,255
-chr21	14554683	chr21:14554683:M	TTTTGTTTTCTTTTTCTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:11:23,0,96	0/1:7,5:13:48,0,93	0/1:2,2:6:19,0,39
-chr21	14569129	chr21:14569129:M	TAAAAAAAAAAATAAAAATA	<3.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/1:23,22:45:255,0,255	0/1:21,17:39:255,0,255	0/0:28,2:31:0,43,255
-chr21	14584000	chr21:14584000:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:255,0,255	0/1:18,19:41:255,0,255	1/1:0,29:32:255,95,0
-chr21	14587745	chr21:14587745:M	TTATTTATTTATTTATTTATTTTTTA	<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:20,25:49:255,0,203	0/1:12,6:18:43,0,137	0/0:27,0:28:0,79,255
-chr21	14605808	chr21:14605808:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<11.2>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:23,0:27:0,59,255	0/1:4,4:8:50,0,50	0/0:16,0:16:0,47,255
-chr21	14615314	chr21:14615314:M	AAAAAAGAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,17:36:217,0,255	0/0:61,0:61:0,179,255	1/1:0,39:39:255,115,0
-chr21	14615864	chr21:14615864:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,0:1:0,0,0	0/0:2,0:4:0,6,54	1/1:0,3:4:82,9,0
-chr21	14618651	chr21:14618651:M	TGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15>,<17>,<20>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,2,12:17:211,242,255,169,255,255,71,71,0,34	2/3:1,0,10,13:29:255,255,255,181,255,255,251,250,0,217	1/2:0,15,12,0:33:255,255,243,255,0,255,255,255,255,255
-chr21	14618710	chr21:14618710:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,9:25:73,0,169	0/0:43,0:45:0,127,255	0/0:27,5:33:0,17,255
-chr21	14649773	chr21:14649773:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,11,7:19:255,183,149,189,0,255	1/2:0,10,8:19:255,210,178,168,0,252	1/1:2,27,0:29:255,52,0,255,87,255
-chr21	14653851	chr21:14653851:M	ACACACACACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,58:58:255,174,0	1/1:0,35:35:255,105,0	1/1:0,52:52:255,156,0
-chr21	14660177	chr21:14660177:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,19,9:30:255,182,102,255,0,255	1/2:2,14,11:27:255,157,116,173,0,190	1/1:0,41,1:42:255,123,0,255,106,255
-chr21	14667322	chr21:14667322:M	ATATATATATATATATATATATATATATATATATATATATATATATATAT	<10>,<14>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,13,12:30:255,255,255,255,0,255	1/1:0,13,0:14:255,40,0,255,40,255	2/2:0,0,8:10:255,255,255,30,30,0
-chr21	14671988	chr21:14671988:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:54,0:55:0,162,255	0/1:19,10:30:98,0,247	0/0:40,0:41:0,120,255
-chr21	14672151	chr21:14672151:M	TTTTTTTTTTTTTTTT	<12>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,13:37:255,255,255,255,0,255	1/2:1,14,14:29:255,224,255,255,0,255	2/2:1,0,21:28:255,255,255,63,82,0
-chr21	14683617	chr21:14683617:M	GAAGGAAGGAAGGAAAGAAGAAAGGAAGAAAGGAAGGTAGGAAGGAGGGAAGGAAGGAAGG	<16.2>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:2,6:11:68,4,0	0/0:6,0:7:0,8,58	1/1:0,4:6:68,16,0
-chr21	14683660	chr21:14683660:M	GGAGGGAAGGAAGGAAGGCAGGGAGGGAGGGAGGGAAGGGA	<11.2>	.	.	Motif=GGAG	GT:AD:DP:PL	0/1:12,4:16:14,0,140	0/0:5,1:6:0,3,60	1/1:0,2:3:30,6,0
-chr21	14693109	chr21:14693109:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:35:225,0,206	0/1:12,11:25:122,0,158	0/1:18,11:29:116,0,243
-chr21	14693958	chr21:14693958:M	ACACACACACACACACACACACACACACACACACA	<15.5>,<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22,0,0:23:255,69,0,255,69,255,255,69,255,255	1/2:3,13,7,0:23:255,68,185,255,0,255,255,220,255,255	1/3:0,13,0,9:23:255,255,219,255,242,255,255,0,255,255
-chr21	14701868	chr21:14701868:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,21:41:255,0,244	0/0:29,0:29:0,85,255	1/1:2,42:45:255,96,0
-chr21	14702524	chr21:14702524:M	TTTTTTTGTTTTTTGTTTTTTTTTGTATTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:36:255,105,0	0/1:18,16:34:184,0,220	0/1:12,20:32:255,0,126
-chr21	14706667	chr21:14706667:M	GAATTAATGAATGAATGAAT	<6>	.	.	Motif=GAAT	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/0:29,0:29:0,85,255	0/1:24,17:41:197,0,255
-chr21	14710598	chr21:14710598:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:11:5,0,131	0/1:8,2:12:3,0,120	0/1:4,5:11:62,0,56
-chr21	14717701	chr21:14717701:M	AAAGAAGAAAGAAAGAAAGAAA	<6.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:56,0:56:0,164,255	0/1:15,15:33:183,0,199
-chr21	14718249	chr21:14718249:M	AAACAAACAAACAAACAAACAAACA	<8.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:55,0:55:0,165,255	0/0:33,0:33:0,99,255	0/1:15,18:33:255,0,255
-chr21	14724402	chr21:14724402:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:5:0,15,84	0/1:3,3:9:27,0,47	0/0:10,0:11:0,32,181
-chr21	14731524	chr21:14731524:M	TTTTCTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23,1:25:255,69,0,255,53,255	1/2:1,4,11:17:237,140,152,51,0,23	1/2:0,11,3:14:255,45,12,190,0,153
-chr21	14732360	chr21:14732360:M	TTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:99,17,0	1/1:0,6:10:127,24,0	1/1:0,8:10:164,29,0
-chr21	14733281	chr21:14733281:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,3:6:106,46,30,39,0,30	0/2:2,1,1:5:19,3,22,0,17,41	1/1:1,5,0:6:63,2,0,66,17,89
-chr21	14734369	chr21:14734369:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:41:255,119,0	1/1:1,39:43:255,108,0	1/1:0,33:34:255,99,0
-chr21	14740792	chr21:14740792:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:1,47:48:255,123,0	1/1:1,51:52:255,135,0
-chr21	14744410	chr21:14744410:M	AAAAAAACAAAACAAAACAAAACAAAACAAAACAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:13,21:34:255,0,255	0/1:13,9:22:174,0,255
-chr21	14751721	chr21:14751721:M	AAAGGAAAAAAAAGGAGAGGAGAGAACAGGAAAGGAGAGAAGAGGAGAAGAAAGGAAAGGAA	<2.4>,<10.4>	.	.	Motif=AAAGG	GT:AD:DP:PL	0/2:13,4,8:28:108,59,255,0,161,215	0/1:5,8,1:17:178,0,159,184,140,255	0/1:8,8,1:32:155,0,255,184,255,255
-chr21	14753289	chr21:14753289:M	AATTGAATTGA	<2>	.	.	Motif=AATTG	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:23,22:45:255,0,255	0/1:22,33:55:255,0,255
-chr21	14757527	chr21:14757527:M	ACACGCACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,13:34:255,0,255	1/1:0,30:30:255,90,0	0/1:28,13:42:255,0,255
-chr21	14760579	chr21:14760579:M	AAATAAATAAATAAAAAAAT	<4.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:20,14:34:218,0,255	0/1:16,8:24:110,0,255
-chr21	14765576	chr21:14765576:M	ACACACACACACACACACACACACACACACACACA	<14.5>,<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,2,27,0:30:255,255,255,89,48,0,255,255,89,255	2/3:0,3,18,11:34:255,255,255,255,255,255,255,255,0,255	1/2:0,15,7,0:24:255,126,57,255,0,225,255,127,255,255
-chr21	14768444	chr21:14768444:M	ACACACACACACACACACACACACA	<15.5>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,13,0:29:255,0,255,240,255,255	1/2:0,11,10:21:255,176,115,193,0,133	0/0:31,0,0:33:0,99,255,99,255,255
-chr21	14785448	chr21:14785448:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:1,31:33:255,79,0	0/1:18,25:44:255,0,209
-chr21	14788176	chr21:14788176:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,16:20:230,0,13	0/1:4,7:14:83,0,52	0/1:10,9:19:103,0,121
-chr21	14789973	chr21:14789973:M	TATATATATATATATATATATAAAAAATATATATA	<20.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,8,3:12:255,85,56,219,0,203	1/1:0,2,0:3:70,9,0,69,9,69	0/2:5,0,5:10:121,133,255,0,136,122
-chr21	14790818	chr21:14790818:M	TTTTTTTTCTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,21:22:255,64,0	0/1:9,18:29:255,0,81
-chr21	14795164	chr21:14795164:M	AATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAA	<12.7>,<14.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:5,16,0:21:255,0,92,255,139,255	1/1:0,7,0:9:247,27,0,221,21,211	0/2:7,0,5:12:118,139,255,0,193,175
-chr21	14797770	chr21:14797770:M	AAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:16:255,44,0	1/1:0,17:20:255,56,0	0/1:2,13:16:255,0,7
-chr21	14820939	chr21:14820939:M	AAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,3:4:96,12,0	0/1:5,2:9:43,0,132
-chr21	14825456	chr21:14825456:M	AAAAAAAAAATAAAAATAAAAGAAAAATAAACAAGAAAAAAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,17:18:255,50,0	0/1:10,14:24:183,0,111
-chr21	14836431	chr21:14836431:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,18:24:255,0,4	0/1:5,18:26:255,0,12	0/1:23,10:37:92,0,255
-chr21	14863039	chr21:14863039:M	AAAAAAAATAAAAATAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:11,17:28:226,0,117	0/1:24,15:39:166,0,255
-chr21	14871742	chr21:14871742:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,6:16:139,0,156	0/0:10,0:12:0,33,255	0/1:10,6:16:116,0,232
-chr21	14872982	chr21:14872982:M	AAAAAAAAAAAACAAGAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:11,12:23:143,0,125	0/0:26,1:28:0,62,255
-chr21	14883019	chr21:14883019:M	AAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,11,63	1/1:0,4:6:78,15,0	0/0:9,0:9:0,26,152
-chr21	14885045	chr21:14885045:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,15:19:255,56,0	1/1:0,9:9:239,27,0
-chr21	14892865	chr21:14892865:M	ATATATATATATATATA	<9>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,7:12:148,108,88,18,0,38	2/2:0,0,0:1:0,0,0,0,0,0	1/2:1,2,8:11:162,123,105,5,0,16
-chr21	14893828	chr21:14893828:M	GTGTGTGTGTGTATGTATGTGTGTGTGTGTGTGTGTG	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:22,0:22:0,66,255	0/1:19,12:33:251,0,255
-chr21	14897623	chr21:14897623:M	ATATATATATAT	<5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,23:38:255,0,178	1/1:0,48:48:255,142,0	0/0:48,0:48:0,142,255
-chr21	14899220	chr21:14899220:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,11:29:250,0,255	1/1:0,13:17:255,39,0	0/0:28,0:31:0,90,255
-chr21	14946845	chr21:14946845:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<10.8>,<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/3:0,0,7,4:11:255,245,225,78,77,46,136,117,0,105	1/2:0,8,8,0:16:255,145,100,124,0,100,255,124,145,255	1/3:1,16,0,5:22:255,119,86,255,93,255,255,0,255,255
-chr21	14948325	chr21:14948325:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,13,0:22:255,0,164,239,141,255	0/2:10,2,10:22:128,110,255,0,136,108	1/2:0,18,7:27:255,104,47,255,0,254
-chr21	14956663	chr21:14956663:M	AAAAAGAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:25:255,53,0	0/1:11,10:22:100,0,125	0/1:16,18:36:198,0,185
-chr21	14960673	chr21:14960673:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,16:38:196,0,255	0/1:17,16:36:198,0,205	0/0:31,2:35:0,65,255
-chr21	14961996	chr21:14961996:M	ATATATATATATATACATATTATATATATATATATATATATATATATAAAATATATA	<24.5>,<25.5>,<26.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,9,0:18:255,165,113,165,0,113,255,140,164,255	1/1:0,2,0,0:2:62,6,0,41,6,35,61,6,40,59	2/3:0,0,2,3:5:135,115,110,53,53,39,36,30,0,21
-chr21	14964173	chr21:14964173:M	CTTTTTTTTTTCTTTTT	<2.7>	.	.	Motif=CTTTTT	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,48:48:255,144,0	1/1:0,40:40:255,120,0
-chr21	14973679	chr21:14973679:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,16:25:223,0,94	1/1:1,13:20:187,8,0	0/1:12,14:29:183,0,145
-chr21	14973844	chr21:14973844:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13,0:14:219,23,0,222,41,247	0/1:2,8,0:10:108,0,5,114,34,166	1/2:1,6,5:13:197,70,54,72,0,83
-chr21	14975627	chr21:14975627:M	AAAAAAAAAAAAAAAAAA	<13>,<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,6,3:17:255,156,166,180,0,162,239,51,135,214	2/3:0,0,7,7:17:255,255,255,97,116,68,143,142,0,102	1/3:2,3,0,14:19:233,203,255,239,255,255,40,0,74,28
-chr21	14975659	chr21:14975659:M	GAGAGAGAGAGAGA	<5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:19,13:32:228,0,255	0/0:34,0:34:0,102,255	0/1:18,13:31:243,0,255
-chr21	14975670	chr21:14975670:M	AGAAAGAAAGAAAG	<2.5>	.	.	Motif=AGAA	GT:AD:DP:PL	0/0:14,2:16:0,18,165	0/1:5,3:8:18,0,44	0/0:29,1:30:0,71,255
-chr21	14981853	chr21:14981853:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,13,9,0:24:255,132,200,206,0,255,255,169,255,255	2/3:2,0,9,5:16:220,253,255,52,82,41,98,157,0,133	1/2:1,11,9,0:21:255,144,200,180,0,255,255,162,255,255
-chr21	14982699	chr21:14982699:M	TTTTTTTTTGTTTTTTTTTTGTTTTTTTTTTTT	<21>,<32>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,25:26:255,255,255,66,75,0	1/2:0,12,10:24:255,174,247,255,0,255	2/2:0,0,23:25:255,255,255,73,75,0
-chr21	14983213	chr21:14983213:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:42:255,0,217	0/1:23,18:45:212,0,255	0/0:46,2:51:0,111,255
-chr21	14984368	chr21:14984368:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:13,11:24:120,0,156	0/0:36,0:37:0,108,255
-chr21	14988422	chr21:14988422:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGATAGATAATATAGATAGATAG	<16>,<16.5>,<17.5>,<18.5>	.	.	Motif=TAGA	GT:AD:DP:PL	2/3:2,1,4,6,0:13:54,62,166,39,97,76,28,32,0,56,89,155,96,91,241	3/4:0,0,0,4,7:15:205,236,255,230,255,255,121,128,127,88,44,75,66,0,36	1/2:0,3,7,0,0:10:95,51,42,29,0,3,119,68,33,174,124,72,33,197,255
-chr21	14988500	chr21:14988500:M	TGTGTGTGTGTGTGTGTGT	<10.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:5,21,0:32:195,34,0,255,95,255	1/2:4,23,11:42:255,255,221,175,0,255	0/0:26,0,0:29:0,47,208,85,255,255
-chr21	14988518	chr21:14988518:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:48,0:48:0,135,255	0/0:36,0:44:0,120,255	0/1:20,19:44:173,0,149
-chr21	14995758	chr21:14995758:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/0:18,0:19:0,56,255	0/1:16,13:30:156,0,215
-chr21	15002474	chr21:15002474:M	ACACACACACACACACGCACCCACGCACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,8:22:89,0,204	0/1:10,10:22:127,0,126	0/0:29,0:29:0,86,255
-chr21	15014828	chr21:15014828:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,19:38:255,0,212	0/1:20,17:38:187,0,247	0/1:21,18:39:211,0,255
-chr21	15019471	chr21:15019471:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:140,15,0	1/1:0,5:6:158,18,0	.
-chr21	15024568	chr21:15024568:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,13:32:255,0,255	0/1:10,12:23:255,0,220	0/0:22,0:25:0,74,255
-chr21	15029826	chr21:15029826:M	AAATAAATAAATAAATAAATAATAAA	<5.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:17,10:27:104,0,231	0/1:17,22:39:255,0,207
-chr21	15033225	chr21:15033225:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,2:8:119,35,33,105,0,143	0/2:2,0,8:10:107,134,224,0,29,5	0/1:13,12,0:26:136,0,156,196,182,255
-chr21	15035557	chr21:15035557:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,0:17:0,49,255	0/1:13,8:24:67,0,182	0/0:15,3:19:0,3,221
-chr21	15043812	chr21:15043812:M	TTGTTTTTTTGTTTGTTTGTTTTTTG	<5.5>	.	.	Motif=TTGT	GT:AD:DP:PL	0/1:16,15:31:195,0,216	0/1:24,19:44:215,0,255	0/0:35,0:35:0,103,255
-chr21	15051273	chr21:15051273:M	TGTGTGTGTGTGCGCGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:50,0:50:0,150,255	0/1:23,8:31:129,0,255	0/0:36,0:36:0,108,255
-chr21	15070306	chr21:15070306:M	ACACACACACACACACACACACACACACA	<11.5>,<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:18,1,27:46:255,255,255,0,255,255	0/1:17,22,0:39:255,0,255,255,255,255	1/2:0,17,19:37:255,255,243,255,0,207
-chr21	15072949	chr21:15072949:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,23:49:255,0,255	0/1:22,14:37:255,0,255	1/1:0,47:48:255,144,0
-chr21	15074088	chr21:15074088:M	TTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:22:215,0,203	0/1:9,6:20:140,0,218	1/1:0,16:17:255,51,0
-chr21	15084468	chr21:15084468:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,19,0:32:255,0,218,255,187,255	0/0:17,0,1:22:0,63,255,33,255,255	1/2:2,19,7:28:255,87,145,255,0,255
-chr21	15087274	chr21:15087274:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:10:126,0,37	0/0:5,0:5:0,15,136	0/1:7,7:22:175,0,146
-chr21	15087819	chr21:15087819:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,21:40:255,0,238	0/0:39,2:43:0,90,255	0/1:20,14:35:161,0,255
-chr21	15090170	chr21:15090170:M	TATATATATATATATATATAT	<11.5>,<12.5>,<13.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,25,0,0:44:255,0,217,255,255,255,255,255,255,255	1/2:1,11,9,0:21:255,139,97,145,0,144,255,133,202,255	0/3:15,0,0,6:21:122,163,255,108,255,255,0,255,255,255
-chr21	15098083	chr21:15098083:M	TTTTTGTTTTTTGTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:15,15:30:180,0,177	0/1:20,18:38:222,0,253
-chr21	15100303	chr21:15100303:M	CTACTACTACTACTACTACTACTACTACTAC	<8.3>	.	.	Motif=CTA	GT:AD:DP:PL	1/1:0,37:38:255,114,0	1/1:0,49:49:255,147,0	1/1:0,40:40:255,120,0
-chr21	15106989	chr21:15106989:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,10,8:22:255,255,255,154,160,101,173,190,0,132	1/2:0,6,6,0:14:255,157,166,153,0,140,255,119,163,255	1/3:0,5,0,7:12:255,188,173,253,118,238,135,0,138,118
-chr21	15108169	chr21:15108169:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,21:23:255,67,0	0/1:8,10:20:126,0,82	0/1:11,16:28:202,0,122
-chr21	15115128	chr21:15115128:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:33:0,81,255	0/1:20,24:45:255,0,204	0/1:25,28:53:255,0,255
-chr21	15115145	chr21:15115145:M	TGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,30:30:255,88,0	0/1:23,19:42:188,0,253	0/1:29,22:51:219,0,255
-chr21	15116601	chr21:15116601:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:24:255,52,0	0/1:18,13:33:149,0,218	1/1:0,34:36:255,105,0
-chr21	15118986	chr21:15118986:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:82,10,0	0/1:4,3:7:29,0,46	0/0:5,0:5:0,15,85
-chr21	15120250	chr21:15120250:M	ATCTATCTATCTATCTGTCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATC	<19.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/0:21,0:24:0,63,255	0/1:8,5:14:98,0,195
-chr21	15128288	chr21:15128288:M	ACACACACACACACACACATACACACAAACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	0/1:15,20:35:255,0,167	1/1:0,30:30:255,89,0
-chr21	15136635	chr21:15136635:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:37:255,109,0	0/1:21,17:38:191,0,255	0/1:22,11:35:110,0,255
-chr21	15137363	chr21:15137363:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,10:14:133,0,23	0/1:14,9:25:100,0,161	1/1:1,11:19:166,10,0
-chr21	15138122	chr21:15138122:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,1,16:18:255,255,255,48,32,0	1/2:0,20,10:30:255,171,85,255,0,255	2/2:0,2,23:25:255,255,255,69,38,0
-chr21	15146923	chr21:15146923:M	AAAAAAAAAAAAAAACAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:19:255,53,0	0/1:17,5:27:22,0,249	0/1:10,9:20:101,0,130
-chr21	15149898	chr21:15149898:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,34:35:255,85,0	0/1:18,17:35:196,0,213	0/1:20,18:39:220,0,248
-chr21	15155800	chr21:15155800:M	CACACACACACACACACACACACACACACACACACACACAC	<19.5>,<21.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,8,7:15:255,255,255,189,190,162,138,209,0,188	1/3:2,10,0,3:16:191,49,45,223,75,255,143,0,255,255	0/2:4,0,14,0:18:188,238,255,0,58,16,238,255,70,255
-chr21	15170061	chr21:15170061:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,8:13:240,111,96,83,0,46	0/2:3,0,2:6:15,27,112,0,57,42	0/2:2,0,3:9:29,39,109,0,49,36
-chr21	15175812	chr21:15175812:M	AAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:7:92,32,30,25,0,42	0/2:6,1,2:9:30,18,89,0,82,142	0/2:2,0,2:4:43,32,54,0,32,43
-chr21	15176666	chr21:15176666:M	CTCTCTCTCTCT	<14.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,17:24:255,64,0	0/1:13,12:33:246,0,255	0/1:11,10:25:204,0,243
-chr21	15176677	chr21:15176677:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,11:34:175,0,255	0/0:29,1:36:0,66,255	0/0:21,1:24:0,41,255
-chr21	15177805	chr21:15177805:M	AATTAATTAATTAATT	<3.2>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,10:10:255,30,0	0/1:16,6:23:103,0,255	0/0:14,1:16:0,10,255
-chr21	15177819	chr21:15177819:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:25:255,52,0	0/1:13,13:28:255,0,255	0/1:13,11:26:236,0,255
-chr21	15192747	chr21:15192747:M	TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTT	<9.6>	.	.	Motif=TTTAA	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:0,11:11:199,32,0	0/1:5,8:13:111,0,55
-chr21	15195361	chr21:15195361:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:78,9,0	0/1:3,3:6:59,0,62	0/1:4,2:10:25,0,109
-chr21	15213460	chr21:15213460:M	AAAAAAAAAAAAAAGAGAAAAGAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/0:14,0:14:0,41,243	0/1:9,11:21:145,0,100
-chr21	15219706	chr21:15219706:M	AAAAAAAAAAAAAAACACAAAAAACAAAAAAAACAAAAACAAACAAACAAAAAA	<56>,<57>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,3:11:246,51,22,124,0,105	2/2:0,1,11:12:255,204,171,36,18,0	0/1:5,8,0:15:173,0,100,141,130,255
-chr21	15220733	chr21:15220733:M	TGTGCGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<21>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,5,3:21:255,94,38,128,0,104,187,15,124,255	2/3:0,1,7,9:18:255,255,250,120,107,71,88,57,0,47	0/1:20,8,0,0:30:16,0,187,82,255,255,104,255,255,255
-chr21	15220770	chr21:15220770:M	GAGAGAGAGAGAGAGAGAGA	<11>,<12>	.	.	Motif=GA	GT:AD:DP:PL	1/2:1,22,17:40:255,217,120,229,0,200	2/2:0,4,20:24:255,255,213,60,14,0	0/1:18,12,1:31:86,0,157,119,229,255
-chr21	15228415	chr21:15228415:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,8:19:70,0,117	0/0:21,1:22:0,48,255	0/1:6,12:18:133,0,41
-chr21	15229863	chr21:15229863:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/0:46,1:47:0,120,255	0/1:19,19:38:242,0,242
-chr21	15229909	chr21:15229909:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,54,0	1/1:0,17:21:255,57,0	1/1:1,24:27:255,49,0
-chr21	15232493	chr21:15232493:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,52:52:255,154,0	1/1:0,52:52:255,153,0	1/1:1,47:48:255,123,0
-chr21	15237230	chr21:15237230:M	TTTTTTTTTTTTTTTGTTTTGTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:14:225,31,0	1/1:1,9:11:148,15,0	0/1:3,10:14:136,0,20
-chr21	15239758	chr21:15239758:M	TATATATATATATATATATATATATATATATATATATATAT	<11.5>,<17.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:13:255,255,255,38,38,0	2/2:0,0,0:1:12,13,14,3,3,0	1/2:0,10,3:14:255,80,47,255,0,255
-chr21	15244443	chr21:15244443:M	AAAAAAAAAAAAAGAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,36:37:255,91,0	0/1:8,24:32:255,0,51
-chr21	15247964	chr21:15247964:M	ATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:1,3:7:0,3,15	0/0:0,1:2:0,0,4	0/1:0,2:3:1,0,2
-chr21	15249320	chr21:15249320:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,39:41:255,84,0	1/1:3,36:40:255,65,0	0/1:23,21:44:253,0,255
-chr21	15255821	chr21:15255821:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,1,4:12:52,25,142,0,52,57	1/2:0,3,5:8:142,68,59,49,0,26	0/0:14,0,0:14:0,42,255,41,255,239
-chr21	15269928	chr21:15269928:M	TTCTTCTTCTTCTCCTCCTTCTCCTCCTCCTCCTCCTTCTTCTCCTTCTTCTTCTTCTT	<20.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:8,9:17:106,0,89	0/0:14,0:14:0,41,231	0/1:5,5:11:62,0,53
-chr21	15272024	chr21:15272024:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<8.7>,<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,23,0:25:255,75,0,255,75,255	1/1:0,27,0:27:255,81,0,255,81,255	1/2:0,15,9:24:255,242,200,255,0,255
-chr21	15284786	chr21:15284786:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,23:23:255,69,0	0/1:16,16:32:255,0,255
-chr21	15296442	chr21:15296442:M	ATATATATATATATATATATATATATATATATATATATA	<9.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,13,1,17:39:255,255,255,255,209,255,255,0,255,255	1/1:0,30,0,0:37:255,110,0,255,108,255,255,110,255,255	2/3:1,0,3,4:10:188,191,218,43,70,45,11,38,0,11
-chr21	15297475	chr21:15297475:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<23>,<26>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,8,4,0:12:255,67,106,244,0,233,255,130,245,255	1/1:0,21,0,0:22:255,66,0,255,66,255,255,66,255,255	2/3:0,0,5,4:9:170,187,255,104,108,93,83,153,0,141
-chr21	15297578	chr21:15297578:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:40:255,0,241	1/1:1,39:40:255,100,0	0/0:32,1:33:0,79,255
-chr21	15298922	chr21:15298922:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATTAAATAAAT	<12.2>,<13.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,9,5:14:255,83,56,173,0,133	1/1:0,9,0:9:255,27,0,188,26,163	2/2:0,0,12:12:226,226,226,35,35,0
-chr21	15299858	chr21:15299858:M	CACACACACACACACACACACACACACACACATACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	0/2:11,0,9:20:197,152,255,0,185,251	0/0:19,0,0:19:0,55,255,57,255,255	1/2:0,6,14:20:255,233,178,85,0,43
-chr21	15304739	chr21:15304739:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:242,0,255	1/1:0,41:41:255,120,0	0/0:51,1:53:0,137,255
-chr21	15314370	chr21:15314370:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,11:17:255,255,255,35,0,52	2/2:0,0,11:14:255,255,255,41,41,0	1/1:1,4,0:7:64,1,0,79,18,148
-chr21	15314986	chr21:15314986:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:34:255,0,157	1/1:1,22:24:255,53,0	0/0:36,1:37:0,91,255
-chr21	15316699	chr21:15316699:M	TTTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,9:23:194,0,255	1/1:0,31:37:255,109,0	0/0:23,0:25:0,75,255
-chr21	15318711	chr21:15318711:M	TTTTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTT	<9>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:8,3:11:20,0,107	0/0:8,0:8:0,23,139	0/0:5,1:7:0,2,76
-chr21	15323545	chr21:15323545:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:21:29,0,212	0/0:26,3:32:0,31,255	1/1:3,24:30:255,13,0
-chr21	15339623	chr21:15339623:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:40,0,57	0/0:8,1:11:0,4,111	0/1:4,2:8:30,0,43
-chr21	15345747	chr21:15345747:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:219,0,255	0/0:37,1:40:0,99,255	0/1:14,18:33:232,0,169
-chr21	15350679	chr21:15350679:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,23:46:255,0,239	1/1:0,31:33:255,96,0	0/0:30,1:31:0,73,255
-chr21	15399504	chr21:15399504:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<14.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:12,16:29:255,0,195	0/0:21,0:24:0,68,255	0/1:13,12:26:201,0,232
-chr21	15403890	chr21:15403890:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:15:0,27,229	0/1:7,7:16:81,0,82	0/1:12,5:17:36,0,156
-chr21	15412255	chr21:15412255:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,11:25:255,0,255	0/0:37,0:38:0,114,255	0/1:7,12:21:255,0,129
-chr21	15421121	chr21:15421121:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:19:90,0,137	0/0:18,0:19:0,53,255	0/1:14,4:19:16,0,205
-chr21	15435488	chr21:15435488:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	0/1:1,3:5:43,0,2	0/1:1,1:2:10,0,10
-chr21	15445742	chr21:15445742:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,22:51:255,0,255	0/0:49,3:52:0,101,255	1/1:1,32:35:255,85,0
-chr21	15470779	chr21:15470779:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,10:22:170,0,187	0/1:14,7:25:114,0,255	0/0:16,0:18:0,49,255
-chr21	15470817	chr21:15470817:M	AGAGAGAGAGAGAGAGAGAGA	<11.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:14,15:31:139,0,106	0/1:16,8:26:50,0,142	0/0:29,0:32:0,90,255
-chr21	15471646	chr21:15471646:M	ACACACACACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,12:26:252,0,255	0/1:12,5:19:79,0,255	0/0:17,0:19:0,56,255
-chr21	15474415	chr21:15474415:M	AATAAAATAAAATAAAA	<2.8>	.	.	Motif=AATAA	GT:AD:DP:PL	0/1:18,16:34:255,0,255	0/1:14,17:31:255,0,255	0/0:43,0:43:0,129,255
-chr21	15495553	chr21:15495553:M	TTTTTTTGTTGTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,11:34:102,0,255	0/1:26,8:35:45,0,255	0/0:40,3:43:0,73,255
-chr21	15518170	chr21:15518170:M	ATATATATATATATATATATATATATATATA	<14.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,6:13:185,101,136,118,0,169	.	0/0:2,0,0:3:0,6,34,5,33,32
-chr21	15519444	chr21:15519444:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGT	<22>,<25>,<28>	.	.	Motif=TG	GT:AD:DP:PL	3/3:0,0,0,5:5:86,100,150,100,150,150,15,15,15,0	1/3:1,10,0,2:14:255,16,31,255,63,255,255,0,255,255	2/3:1,0,3,4:9:122,137,203,50,114,102,71,89,0,75
-chr21	15520130	chr21:15520130:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:21:0,60,255	0/1:10,5:16:85,0,230	0/0:19,0:20:0,57,255
-chr21	15526728	chr21:15526728:M	AAAAAAAAGAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:33:255,0,255	1/1:0,31:36:255,98,0	0/0:37,0:37:0,111,255
-chr21	15534095	chr21:15534095:M	ATATATATATATATATATATA	<11.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:17,1,11:29:241,188,255,0,255,255	1/2:0,11,7:19:255,132,80,165,0,141	0/0:36,0,0:36:0,106,255,108,255,255
-chr21	15540648	chr21:15540648:M	TTTATTTATTTATTTTTTTTTTTTTTTTTTTTTTATTT	<9.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:6,17:32:60,7,0	1/1:0,16:19:88,29,0	0/0:10,2:34:0,14,65
-chr21	15552166	chr21:15552166:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,8:34:122,0,255	1/1:0,30:36:255,105,0	0/0:59,0:61:0,182,255
-chr21	15566192	chr21:15566192:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19>,<23>,<24>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,6,0:20:255,159,118,229,0,255,255,105,255,255	1/3:0,5,0,5:10:204,134,119,167,83,205,84,0,135,120	0/2:8,1,10,0:20:244,253,255,0,120,195,179,255,227,255
-chr21	15570044	chr21:15570044:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,1,6:21:46,88,255,0,194,202	0/2:13,0,6:20:54,109,255,0,185,164	1/2:3,8,3:15:116,7,48,103,0,212
-chr21	15572708	chr21:15572708:M	TATATATATATATATATATATATATATAT	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:13,1:17:0,25,211	0/0:2,0:2:0,6,33	1/1:0,7:7:120,20,0
-chr21	15575687	chr21:15575687:M	TTTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,39:40:255,120,0	1/1:0,36:40:255,119,0
-chr21	15597540	chr21:15597540:M	GTGTGTCTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTATGTG	<12.2>	.	.	Motif=GTGT	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,25:25:255,75,0	1/1:1,26:28:255,49,0
-chr21	15601839	chr21:15601839:M	TCTCTCTCTCTCAATCTCTCTCTCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<28>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,12:13:255,39,0	1/1:0,14:14:255,42,0	1/1:0,21:23:255,68,0
-chr21	15601899	chr21:15601899:M	GTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<26>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,5,2:7:150,30,32,120,0,110	0/0:5,0,1:6:0,18,157,2,77,60	1/2:0,4,10:15:236,149,219,108,0,76
-chr21	15606237	chr21:15606237:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,103,0	0/1:12,10:22:112,0,146	1/1:1,34:35:255,85,0
-chr21	15606728	chr21:15606728:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/1:16,18:35:216,0,190	0/0:38,1:40:0,99,255
-chr21	15610775	chr21:15610775:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,1:8:0,6,102	0/1:5,4:10:45,0,52	0/0:11,0:12:0,35,193
-chr21	15625607	chr21:15625607:M	CACACACACACACACACACACACGCACACACACACACACA	<19>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/2:3,16,16:35:255,250,255,252,0,255	0/1:7,20,0:29:255,0,39,255,105,255	1/2:1,15,8:24:255,131,199,255,0,255
-chr21	15628454	chr21:15628454:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,13:27:255,0,180	0/1:4,14:20:255,0,34	0/1:12,10:25:189,0,220
-chr21	15628492	chr21:15628492:M	AGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGACAGAGAGAGAGA	<26.5>,<27.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:10,6,3:20:60,0,92,27,105,250	0/2:7,2,11:20:215,121,159,0,68,118	0/2:12,3,5:20:73,32,138,0,126,247
-chr21	15628596	chr21:15628596:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,51:52:255,135,0	0/1:22,25:47:255,0,255	1/1:0,48:48:255,142,0
-chr21	15629254	chr21:15629254:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,18,8,0:31:255,234,174,255,0,255,255,230,255,255	0/2:2,0,14,1:17:255,255,255,0,65,23,255,255,17,255	1/3:0,18,0,13:32:255,229,255,255,255,255,255,0,255,255
-chr21	15629909	chr21:15629909:M	AAAAAAAAAACAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:44:255,129,0	0/1:16,18:35:227,0,182	1/1:1,32:35:255,84,0
-chr21	15632312	chr21:15632312:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,21:43:255,0,255	0/1:21,26:48:255,0,245	0/1:35,28:63:255,0,255
-chr21	15636907	chr21:15636907:M	ATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:19,14:37:255,0,255	0/1:21,10:31:227,0,255	0/1:18,11:31:255,0,255
-chr21	15645363	chr21:15645363:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:16,15:33:255,0,255	1/1:0,37:38:255,114,0
-chr21	15648427	chr21:15648427:M	AAGAAAGAAAGA	<3.8>	.	.	Motif=AAGA	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:24,18:42:255,0,255	1/1:0,35:35:255,105,0
-chr21	15659543	chr21:15659543:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,6:16:57,0,120	0/1:15,6:23:34,0,201	0/1:12,5:17:35,0,155
-chr21	15664869	chr21:15664869:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,14:18:240,25,0	0/1:8,9:22:113,0,95	1/1:3,19:24:255,17,0
-chr21	15667565	chr21:15667565:M	ACACTACACACACACACACACACACACACACACAAATACACACACACA	<22>,<23>,<25>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,8,0:21:255,128,89,243,0,183,255,149,244,255	1/3:0,15,0,11:26:255,194,255,255,255,255,255,0,255,255	2/2:0,0,18,0:18:255,255,255,53,53,0,255,255,54,255
-chr21	15669218	chr21:15669218:M	AAAAAAAAAAAAAACAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:6,10:17:123,0,63	1/1:0,29:29:255,85,0
-chr21	15672189	chr21:15672189:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,10:15:192,7,0	1/1:0,16:18:255,52,0	1/1:1,13:16:241,29,0
-chr21	15678835	chr21:15678835:M	ACACACACACACACACACACACACACACACACACACA	<20.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,12,0:30:255,208,124,255,0,224,255,178,255,255	0/1:17,6,0,0:23:104,0,255,99,255,255,155,255,255,255	2/3:0,0,6,11:17:255,255,255,190,188,141,104,87,0,54
-chr21	15679780	chr21:15679780:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,92	0/0:9,0:9:0,26,150	0/0:10,1:11:0,15,154
-chr21	15704677	chr21:15704677:M	ACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	0/0:28,0:31:0,91,255	0/1:18,10:28:97,0,239	0/0:44,0:44:0,130,255
-chr21	15706489	chr21:15706489:M	ATATATATATATATGTGTGTGTATATATATATATATATATA	<24.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,11:21:255,63,0	0/0:12,0:14:0,14,255	1/1:0,11:16:255,48,0
-chr21	15706529	chr21:15706529:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<12.5>,<16.5>,<17.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,0,9,8:19:255,255,255,73,97,40,123,128,0,73	1/2:0,9,4,1:16:255,84,86,255,0,250,255,34,252,255	2/2:0,0,17,1:22:255,255,255,62,66,0,255,255,48,224
-chr21	15708937	chr21:15708937:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<26>,<27>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,3,0:7:164,170,180,21,21,0,109,110,17,92	1/2:0,5,2,0:10:213,57,65,146,0,149,188,30,146,180	2/3:0,0,1,3:10:138,151,212,39,63,34,74,78,0,55
-chr21	15712760	chr21:15712760:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:58,6,0	0/0:1,0:3:0,7,44	1/1:0,3:7:105,14,0
-chr21	15714379	chr21:15714379:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,5,10,0:16:209,163,250,74,0,107,254,255,143,255	1/3:0,9,0,9:19:255,246,217,255,247,255,163,0,255,240	2/2:0,0,20,0:20:255,255,255,59,60,0,255,255,60,255
-chr21	15730977	chr21:15730977:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3,1:6:34,0,27,34,12,87	1/1:0,4,0:6:76,14,0,87,14,122	0/2:3,0,5:8:61,84,184,0,42,27
-chr21	15750215	chr21:15750215:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,3:6:25,28,49,0,12,1	0/1:1,3,1:6:54,0,15,25,6,28	1/2:0,1,3:5:48,28,25,12,0,1
-chr21	15775740	chr21:15775740:M	CCCCCCCCCCCCCCCGCCCCC	<20>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,1:2:16,3,0	1/1:0,1:1:15,3,0	1/1:0,3:3:47,9,0
-chr21	15790651	chr21:15790651:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,2:24:0,34,255	0/0:19,1:22:0,47,255	0/1:6,9:17:118,0,67
-chr21	15806426	chr21:15806426:M	TTTCTTTTTTTTTTTTCTTTCTTTTCT	<5.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:1,34:35:255,84,0	1/1:0,28:28:255,83,0	1/1:0,44:44:255,130,0
-chr21	15827753	chr21:15827753:M	TGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<28.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:5,6:12:146,0,127	0/1:4,4:9:99,0,93	0/1:1,8:11:215,0,1
-chr21	15846123	chr21:15846123:M	TATATATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,4:11:49,0,10	0/0:1,0:1:0,3,13	0/1:1,0:5:1,0,8
-chr21	15860954	chr21:15860954:M	ATATATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,13,0:28:124,0,94,207,175,255	0/1:13,8,0:23:66,0,105,135,170,255	1/2:1,12,12:26:255,255,255,143,0,255
-chr21	15860976	chr21:15860976:M	AGAGAGAGAGAGAGAGAGAG	<13>,<14>	.	.	Motif=AG	GT:AD:DP:PL	0/1:9,12,0:23:255,0,191,177,231,255	0/2:9,1,12:22:255,143,255,0,218,195	0/1:19,13,0:38:255,0,255,222,255,255
-chr21	15862572	chr21:15862572:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/1:5,10:16:126,0,49	0/0:20,0:21:0,61,255
-chr21	15862749	chr21:15862749:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,31:51:255,0,204	0/0:47,0:48:0,140,255	0/1:19,30:50:255,0,209
-chr21	15864159	chr21:15864159:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:24:0,49,255	0/1:11,10:21:109,0,127	0/0:23,0:28:0,81,255
-chr21	15884470	chr21:15884470:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,1:17:0,31,255	0/1:8,4:12:33,0,101	0/0:12,2:15:0,8,183
-chr21	15891364	chr21:15891364:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,6,4:11:231,59,38,115,0,87	2/2:1,0,15:16:236,239,255,30,47,0	1/1:0,8,0:13:234,13,0,160,25,150
-chr21	15891808	chr21:15891808:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,18:36:225,0,225	0/1:15,8:24:70,0,199	0/1:16,17:36:201,0,211
-chr21	15895048	chr21:15895048:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,42:45:255,111,0	1/1:1,45:46:255,117,0
-chr21	15903621	chr21:15903621:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,6:7:170,21,0
-chr21	15905522	chr21:15905522:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,5:30:13,0,255	0/1:11,13:27:173,0,109	0/0:28,2:32:0,58,255
-chr21	15907947	chr21:15907947:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:4:23,0,23	1/1:0,5:5:83,15,0	0/0:8,0:8:0,23,136
-chr21	15956506	chr21:15956506:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,2:37:0,71,255	0/0:21,1:23:0,49,255	0/1:24,22:47:255,0,255
-chr21	15959355	chr21:15959355:M	ACACACACACACACACACACACACACGCACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,12:18:89,0,18	1/1:0,4:5:55,13,0	0/1:7,3:10:7,0,52
-chr21	15959397	chr21:15959397:M	ATATATATATATATATATATATATATATATATAT	<18>,<21>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,4:8:136,98,86,47,0,86	.	2/2:0,0,1:1:28,28,28,3,3,0
-chr21	15963134	chr21:15963134:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:32,0,120	0/0:11,1:13:0,21,177	0/1:11,4:18:20,0,158
-chr21	15971170	chr21:15971170:M	TATCTATCTATCTAATGTATCTTATCTATCTATCTATCTATCTATCTATCTATCTATGTATCTA	<18>,<19>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,3,3:6:163,57,40,57,0,40	1/2:0,8,8:16:255,144,98,143,0,98	1/1:0,8,0:10:238,25,0,156,7,129
-chr21	15974836	chr21:15974836:M	AAATAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<7.8>,<12.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/3:0,0,13,11:24:255,255,255,208,209,140,211,246,0,178	2/2:0,0,11,0:11:198,229,255,32,33,0,198,229,32,198	1/3:0,11,0,10:21:255,255,243,255,184,255,255,0,255,255
-chr21	15985762	chr21:15985762:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,11:15:255,195,157,44,0,8	0/2:4,3,9:18:229,123,143,0,23,67	1/2:1,12,7:20:255,100,60,152,0,157
-chr21	15987744	chr21:15987744:M	TATTTTGTTTTTTTAATTTTGTTTTATATTATTTTATTTTATTTT	<9.4>,<9.6>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:0,21,0:21:255,63,0,255,63,255	1/1:0,22,0:22:255,66,0,255,66,255	1/2:0,17,20:37:255,255,255,255,0,255
-chr21	15988227	chr21:15988227:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:2,39:41:255,85,0	0/1:22,16:38:188,0,255
-chr21	15993247	chr21:15993247:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,12:13:255,255,228,39,38,0	2/2:0,0,9:9:255,178,154,27,26,0	1/2:1,5,5:11:179,69,56,56,0,67
-chr21	16003384	chr21:16003384:M	AAAAAAGAAAAAAGAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,37:37:255,109,0	1/1:0,38:38:255,112,0
-chr21	16004974	chr21:16004974:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:28,0,9	0/0:2,0:2:0,6,34	0/1:1,4:5:57,0,3
-chr21	16008278	chr21:16008278:M	ACACACACACACACACACACACACACACA	<19.5>,<21.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,16,0:17:255,255,255,51,48,0,255,255,51,255	2/3:0,0,7,3:11:255,255,255,78,75,52,196,182,0,183	1/2:0,10,5,0:17:255,135,99,255,0,246,255,132,255,255
-chr21	16011788	chr21:16011788:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<10>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,34,0:36:255,108,0,255,108,255	1/1:0,33,0:35:255,105,0,255,105,255	1/2:0,14,9:24:255,238,196,255,0,255
-chr21	16012632	chr21:16012632:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,65,0	1/1:0,9:10:247,27,0	1/1:0,19:22:255,60,0
-chr21	16033977	chr21:16033977:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/0:29,1:33:0,76,255	0/1:9,12:25:159,0,109
-chr21	16036689	chr21:16036689:M	TTATTTATTTATTTATTTATTT	<6.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:34,0:34:0,100,255	0/1:9,14:23:195,0,102
-chr21	16052752	chr21:16052752:M	TTTTTTTTTCTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,18:36:227,0,227	0/1:21,13:34:128,0,255	0/0:34,0:34:0,100,255
-chr21	16057473	chr21:16057473:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:136,0,255	0/0:31,0:32:0,94,255	0/1:17,17:35:220,0,211
-chr21	16063690	chr21:16063690:M	ATCTATCCATCTATTACCTATCTATCTATCTATCTATCTATCTATATATCTATCTAT	<15.2>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:13,10:23:124,0,182	0/1:7,12:19:161,0,70	0/0:17,0:17:0,50,255
-chr21	16066252	chr21:16066252:M	TCTTTCTTTTTCTTTTTTCTTTCTTTCTTTCTTTCTTT	<10.8>,<11.5>,<13.5>	.	.	Motif=TCTT	GT:AD:DP:PL	1/3:0,3,0,3:12:160,114,105,136,96,142,46,0,63,73	2/3:0,0,4,0:7:93,85,79,18,17,5,73,65,0,70	2/3:0,2,4,6:20:195,162,155,96,75,93,50,17,0,72
-chr21	16071570	chr21:16071570:M	CCCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,4:7:135,9,0	.	1/1:0,2:3:76,9,0
-chr21	16091623	chr21:16091623:M	ATTTATTTATTTATTTATTT	<7>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,21:21:255,63,0	0/1:14,9:23:209,0,255	1/1:0,22:22:255,66,0
-chr21	16095631	chr21:16095631:M	AGATAGATAGCAGTAAGATAGGTAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<17.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/1:0,13:14:252,41,0	0/1:4,4:9:54,0,45	0/1:8,4:12:38,0,111
-chr21	16095995	chr21:16095995:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:255,44,0	1/1:2,21:23:255,33,0	1/1:1,22:23:255,50,0
-chr21	16097598	chr21:16097598:M	TGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,0:33:0,88,255	0/0:26,2:29:0,47,255	0/1:15,20:36:255,0,170
-chr21	16105071	chr21:16105071:M	TTTTTTTTGGTTTTGTTTTTGTTTTTTTTGTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/1:8,12:20:158,0,86	0/0:17,0:17:0,50,255
-chr21	16114233	chr21:16114233:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/0:23,1:26:0,56,255	0/1:16,8:26:67,0,229
-chr21	16116725	chr21:16116725:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,109,0	0/1:13,18:31:232,0,141	1/1:0,50:50:255,148,0
-chr21	16154947	chr21:16154947:M	AAATAAATAAATAAATAATAAATAAATAAATAAATAAATAAA	<33.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:9,3:12:6,0,229	0/0:7,0:8:0,21,206	0/0:10,1:11:0,19,255
-chr21	16157677	chr21:16157677:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:24:255,0,135	0/1:11,8:21:180,0,242	0/1:10,15:27:255,0,201
-chr21	16164271	chr21:16164271:M	TTTTCTCTTCTTTTCTTTTCTTTTCTTTTTTTTTTTT	<7.6>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:9,4:14:12,0,85	0/1:4,3:8:18,0,31	0/1:11,8:20:55,0,84
-chr21	16167144	chr21:16167144:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<21>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,12:25:255,213,255,255,0,255	1/2:0,14,12:26:255,204,255,255,0,255	1/2:0,14,12:30:255,233,255,255,0,255
-chr21	16171591	chr21:16171591:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,1:3:78,17,9,35,0,26	1/2:0,2,4:8:183,67,44,53,0,34	1/2:0,4,2:9:208,35,9,97,0,78
-chr21	16178919	chr21:16178919:M	AAAAAAAAAAAGAAAAGAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:0,38:39:255,114,0	1/1:2,37:39:255,79,0
-chr21	16182568	chr21:16182568:M	TCTCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:4,14:19:220,0,23	1/1:1,15:16:255,29,0	1/1:1,6:7:99,2,0
-chr21	16187807	chr21:16187807:M	TCCTTCCTTCCTCCTTTCCTTCTTTCCTTTCTTTCTTTCTTGCTTCCTTCCTTCCCTCCTTCCTTC	<5>,<8.2>,<18.5>	.	.	Motif=TCCT	GT:AD:DP:PL	2/3:0,1,3,10:15:255,255,255,234,222,239,75,49,0,45	1/3:0,3,0,7:10:232,163,166,240,175,252,77,0,77,56	2/3:0,1,6,5:13:255,242,246,117,98,106,151,125,0,136
-chr21	16189426	chr21:16189426:M	TTTTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,60,0	1/1:0,29:31:255,90,0	1/1:0,24:25:255,73,0
-chr21	16192978	chr21:16192978:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,28:31:255,36,0	1/1:1,28:29:255,68,0	1/1:1,37:38:255,94,0
-chr21	16193863	chr21:16193863:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,14:29:255,243,172,208,0,173	1/1:3,15,1:19:218,4,0,201,38,255	1/2:0,6,14:20:255,243,189,90,0,48
-chr21	16193922	chr21:16193922:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,9,11:22:255,222,163,137,0,98	1/1:1,20,1:22:255,47,0,255,47,255	1/2:4,19,8:32:255,63,52,200,0,255
-chr21	16197311	chr21:16197311:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,8:25:144,0,255	1/1:0,22:27:255,45,0	0/0:35,0:37:0,111,255
-chr21	16205191	chr21:16205191:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:36:200,0,255	1/1:1,48:49:255,126,0	0/0:49,1:50:0,129,255
-chr21	16207977	chr21:16207977:M	ACACATACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,23:41:255,0,255	1/1:1,20:23:255,39,0	0/0:43,0:44:0,132,255
-chr21	16213875	chr21:16213875:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,26:42:255,0,183	1/1:0,48:48:255,141,0	0/0:32,2:34:0,63,255
-chr21	16218220	chr21:16218220:M	TATATATATATATAACATATATATATCTATATATATATATAGATATATATA	<26.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:9,1:10:0,11,146	1/1:0,2:2:35,6,0	0/1:6,3:9:28,0,80
-chr21	16220076	chr21:16220076:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,8:25:153,0,255	0/0:25,0:25:0,75,255	0/1:9,12:22:255,0,172
-chr21	16220124	chr21:16220124:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:23:162,0,215	0/0:9,0:11:0,27,228	0/1:5,3:11:53,0,105
-chr21	16226937	chr21:16226937:M	AAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:5:56,0,17	1/1:0,2:4:57,6,0	1/1:0,4:5:112,12,0
-chr21	16237993	chr21:16237993:M	TATATATATATATACACATATATATGAGAATATATATCTATATCTATATATATATAT	<30.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:20,0:20:0,58,255	0/0:15,0:15:0,44,248	0/1:9,7:20:96,0,98
-chr21	16238049	chr21:16238049:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,15:29:66,0,53	1/1:5,17:22:109,10,0	0/1:17,12:32:30,0,101
-chr21	16238083	chr21:16238083:M	TATATATATATA	<5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,9:30:19,0,127	0/0:21,1:22:0,47,205	0/0:20,5:29:0,11,161
-chr21	16239526	chr21:16239526:M	TTTTTCTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:16:47,0,105	1/1:1,6:8:88,8,0	0/1:11,7:21:52,0,124
-chr21	16247684	chr21:16247684:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,9,9:21:255,108,104,85,0,136	1/1:0,19,0:21:255,48,0,255,48,255	1/2:0,12,13:26:255,235,165,181,0,139
-chr21	16248034	chr21:16248034:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTAT	<13.8>	.	.	Motif=TATG	GT:AD:DP:PL	1/1:0,17:18:255,53,0	1/1:0,19:22:255,65,0	1/1:0,16:20:255,59,0
-chr21	16249011	chr21:16249011:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,27:30:255,51,0	1/1:1,26:29:255,67,0	1/1:0,27:27:255,79,0
-chr21	16249737	chr21:16249737:M	TTTTTTTCTTTTTTCTTTTTTTTTTTCTTTTCTTTTTTTTTTTTTT	<49>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:174,12,0	1/1:0,5:5:140,15,0	1/1:0,3:4:98,12,0
-chr21	16251228	chr21:16251228:M	ATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:24,19:44:255,0,255	0/0:31,0:31:0,93,255	0/1:28,24:53:255,0,255
-chr21	16254112	chr21:16254112:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:34:255,81,0	1/1:1,37:38:255,94,0	1/1:0,29:30:255,88,0
-chr21	16260029	chr21:16260029:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,22:38:255,0,195	1/1:1,38:41:255,85,0	0/1:33,21:54:242,0,255
-chr21	16261362	chr21:16261362:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,31:45:255,0,226	1/1:0,32:33:255,99,0	0/1:19,18:38:255,0,255
-chr21	16265716	chr21:16265716:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,5:11:178,70,57,57,0,68	0/1:3,9,1:13:127,0,13,111,34,183	1/2:1,5,5:11:174,68,55,56,0,66
-chr21	16273115	chr21:16273115:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:16:0,24,206	0/1:5,3:9:26,0,56	0/1:4,2:8:10,0,64
-chr21	16273814	chr21:16273814:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,17:19:255,255,255,55,20,0	1/2:1,12,8:23:255,98,81,203,0,161	2/2:2,1,23:26:255,255,255,41,58,0
-chr21	16274638	chr21:16274638:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,15:31:255,255,192,232,0,184	2/2:1,3,26:31:255,255,255,55,27,0	1/2:1,24,17:43:255,255,181,255,0,255
-chr21	16284659	chr21:16284659:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<15.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,24,0:30:255,255,255,89,86,0,255,255,89,255	1/2:0,12,11,0:30:255,255,255,255,0,234,255,255,255,255	2/3:0,0,7,4:12:245,240,255,66,121,100,191,174,0,177
-chr21	16286560	chr21:16286560:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:1,36:37:255,91,0	0/1:17,25:42:255,0,194
-chr21	16296053	chr21:16296053:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,1:9:0,6,63	1/1:1,8:13:109,21,0	0/0:2,0:4:0,10,37
-chr21	16314013	chr21:16314013:M	TATATATATATATATATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,3:4:32,8,0	.	1/1:0,1:1:11,3,0
-chr21	16318998	chr21:16318998:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	0/1:8,2:11:4,0,102	0/1:6,4:10:38,0,72
-chr21	16324595	chr21:16324595:M	TATATATATATATAACATAGACATATAATATATATTTAAATAAATTATATAAGTATATATA	<19>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,9:19:255,0,164	0/1:3,1:4:19,0,61	0/1:4,5:10:160,0,89
-chr21	16325630	chr21:16325630:M	TATATATATATATGTATTATATAT	<13>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,21:22:255,62,0	1/1:1,27:30:255,65,0	1/1:1,33:34:255,82,0
-chr21	16325924	chr21:16325924:M	TGTGTGTGCTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:20:255,60,0	1/1:0,20:21:255,63,0	1/1:0,15:19:255,53,0
-chr21	16326942	chr21:16326942:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:111,20,0	1/1:0,4:4:61,12,0	1/1:1,6:8:90,7,0
-chr21	16334137	chr21:16334137:M	TTTTTTTTTCTTTTTTCTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,51,0	1/1:0,12:14:255,39,0	1/1:0,14:17:255,44,0
-chr21	16339960	chr21:16339960:M	TATATATATATTTATATAGGTTATATATATATATTTATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,6:30:70,0,255	0/1:12,3:15:33,0,255	0/1:14,5:20:72,0,255
-chr21	16343728	chr21:16343728:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:0,32:33:255,86,0	1/1:3,33:37:255,52,0
-chr21	16349644	chr21:16349644:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47:48:255,142,0	1/1:0,47:49:255,144,0	1/1:0,57:61:255,180,0
-chr21	16351369	chr21:16351369:M	TTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:2,15:20:255,20,0	1/1:2,12:14:183,5,0	1/1:1,6:7:90,2,0
-chr21	16352876	chr21:16352876:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:25:255,73,0	1/1:1,42:44:255,111,0	1/1:0,39:40:255,118,0
-chr21	16353119	chr21:16353119:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,5:6:164,88,71,18,0,0	1/2:0,5,10:16:255,175,132,84,0,38	1/2:0,6,5:12:255,87,52,111,0,79
-chr21	16357494	chr21:16357494:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,21:22:255,65,0	1/1:0,20:20:255,60,0	1/1:0,16:18:255,51,0
-chr21	16365332	chr21:16365332:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:103,18,0	0/1:3,2:6:32,0,32	1/1:0,3:4:39,0,0
-chr21	16368736	chr21:16368736:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:212,35,0	0/1:6,7:17:99,0,57	0/1:2,8:18:124,0,8
-chr21	16369234	chr21:16369234:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:4:85,64,57,12,11,0	1/2:0,2,2:5:113,43,30,33,0,18	1/2:0,4,5:9:239,84,58,67,0,41
-chr21	16373579	chr21:16373579:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:13,14:28:175,0,148	0/0:34,0:34:0,100,255
-chr21	16387373	chr21:16387373:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/1:34,22:59:236,0,255	0/1:23,19:42:223,0,255
-chr21	16389399	chr21:16389399:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:3,34:39:255,51,0	1/1:1,47:50:255,119,0
-chr21	16390562	chr21:16390562:M	TTTTTTTTTTTTTTTTT	<18>,<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/3:2,1,1,3:8:63,45,64,35,47,90,0,3,29,58	1/2:1,4,3,2:12:91,45,54,32,0,103,56,21,72,144	0/2:9,0,9,0:20:204,213,255,0,133,202,222,255,231,255
-chr21	16393300	chr21:16393300:M	TTATTATTATTATTATTATTATTATTAT	<8.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,23:25:255,74,0	1/1:0,16:16:255,47,0	1/1:0,34:35:255,103,0
-chr21	16399731	chr21:16399731:M	TTTTGTTTTTTGTTTTTTGTTTTTTTT	<26>,<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15,0:26:207,0,132,255,206,255	1/2:0,12,12:25:255,255,255,207,0,255	0/2:15,0,15:30:255,255,255,0,255,255
-chr21	16400433	chr21:16400433:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6,1:13:147,0,105,97,72,152	1/2:3,16,4:24:255,8,30,227,0,214	0/2:4,1,6:12:81,71,175,0,60,46
-chr21	16407333	chr21:16407333:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,24:27:255,24,0	1/1:4,25:30:255,18,0	1/1:0,40:42:255,123,0
-chr21	16409823	chr21:16409823:M	TATATATATGTGTGTATATATATATATATATATATATATATATACACACACACATATATATATATACACACATATATATATATATA	<19>,<39>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,4:12:255,126,110,133,0,116	2/2:0,0,0:3:33,35,37,6,6,0	1/1:0,3,0:7:109,12,0,109,12,109
-chr21	16413109	chr21:16413109:M	ATATATATATATATATATATATATATATATATATA	<15.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:8,3,5:17:41,12,167,0,64,52	0/1:1,0,0:4:36,0,10,25,10,28	1/1:0,3,0:9:148,23,0,102,21,85
-chr21	16413143	chr21:16413143:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<24>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,6:7:173,20,0	1/1:0,0:2:16,5,0	1/1:0,1:4:26,3,0
-chr21	16414148	chr21:16414148:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,0:52:0,143,255	0/0:31,1:32:0,76,255	0/1:24,11:36:103,0,255
-chr21	16415006	chr21:16415006:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:14,20:34:252,0,146	0/0:56,0:57:0,167,255
-chr21	16417594	chr21:16417594:M	ATATATATATATATATATATATATATATA	<8.5>,<19.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:7:122,122,122,15,15,0	1/1:0,18,0:19:255,54,0,255,53,255	0/0:0,0,0:1:0,0,0,0,0,0
-chr21	16420341	chr21:16420341:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,22:26:255,22,0	1/1:2,27:29:255,51,0	1/1:0,21:23:255,67,0
-chr21	16427648	chr21:16427648:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:144,18,0	0/0:2,0:6:0,1,63	1/1:0,5:9:177,14,0
-chr21	16429651	chr21:16429651:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:91,9,0	0/0:0,0:2:0,0,0	1/1:0,2:3:77,9,0
-chr21	16431758	chr21:16431758:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:37:0,88,255	0/0:37,2:42:0,88,255	0/1:16,11:30:113,0,213
-chr21	16437303	chr21:16437303:M	AAAAAGACAAAAAAAAAAAAAGAAAAAGAA	<4.8>,<5.2>	.	.	Motif=AAAAAG	GT:AD:DP:PL	1/2:0,14,5:20:255,102,88,255,0,255	0/1:10,17,1:28:255,0,136,255,159,255	1/2:0,14,3:18:255,63,43,255,0,255
-chr21	16440491	chr21:16440491:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:20:0,40,255	0/0:12,0:15:0,38,220	0/1:14,8:23:77,0,201
-chr21	16448675	chr21:16448675:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:27,12:39:164,0,255	1/1:1,21:23:255,42,0	0/0:32,0:33:0,96,255
-chr21	16448713	chr21:16448713:M	TGTGTGTGTGTGTGTATGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,4:5:56,13,0	1/1:0,1:2:21,5,0	0/0:17,1:19:0,30,172
-chr21	16448733	chr21:16448733:M	TATATATATGTGTGTATATATATATGTATATATATATATATA	<22>,<29>,<30>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,3,3:8:189,189,189,36,36,13,36,36,0,13	3/3:0,0,3,5:14:233,228,225,59,52,41,21,14,2,0	1/3:0,7,0,2:11:76,39,28,64,16,210,48,0,199,194
-chr21	16448774	chr21:16448774:M	ACACACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,17,6:26:255,55,8,202,0,180	1/1:2,35,0:38:255,63,0,255,103,255	2/2:2,0,30:32:255,255,255,40,79,0
-chr21	16462413	chr21:16462413:M	CACAGACACACACACACACACACACACACACACACACACACACACACAC	<22.5>,<23.5>,<25.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,18,0:18:255,255,255,53,53,0,255,255,54,255	2/3:0,0,9,6:15:208,225,255,99,160,129,149,149,0,214	1/2:0,7,4,0:16:255,61,29,152,0,116,255,72,152,255
-chr21	16478618	chr21:16478618:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,8:23:75,0,200	0/0:12,2:16:0,2,170	0/1:9,10:25:145,0,97
-chr21	16503580	chr21:16503580:M	AAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:1,15:16:242,30,0	1/1:2,24:26:255,41,0
-chr21	16520902	chr21:16520902:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,9:24:255,161,196,228,0,255	0/1:9,6,0:17:72,0,99,116,123,255	1/2:1,13,7:22:255,102,136,216,0,255
-chr21	16534952	chr21:16534952:M	TTTTTGTTTTTTTTTTTTGTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,114,0	1/1:1,27:31:255,62,0	1/1:0,25:25:255,73,0
-chr21	16544226	chr21:16544226:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:28:226,0,119	0/1:17,21:39:255,0,181	0/1:15,20:37:255,0,170
-chr21	16546314	chr21:16546314:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,2:4:22,0,10	0/1:1,1:2:10,0,10	0/1:1,3:4:38,0,5
-chr21	16555773	chr21:16555773:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:47:255,138,0	1/1:0,42:42:255,123,0	1/1:2,49:51:255,114,0
-chr21	16558539	chr21:16558539:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:34,6,0	1/1:0,3:4:60,11,0	0/1:2,2:5:19,0,29
-chr21	16584313	chr21:16584313:M	ACACACACACACACACACACACACACACACACTCACAAACACAC	<21>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,8:23:78,0,207	0/1:16,11:28:119,0,196	0/1:17,13:31:151,0,214
-chr21	16588407	chr21:16588407:M	TTTTTTCTTTTCTTTCTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,96,255	0/1:17,16:33:160,0,175	0/0:41,0:41:0,119,255
-chr21	16615525	chr21:16615525:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,36:40:255,116,0	1/1:0,27:30:255,85,0
-chr21	16619903	chr21:16619903:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:108,18,0	1/1:1,10:13:153,10,0	1/1:1,16:18:255,33,0
-chr21	16622858	chr21:16622858:M	ACACACACACACACACACACACACACGTGCACACACACACACACA	<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6:21:47,0,212	0/1:6,10:17:123,0,64	1/1:1,14:15:231,26,0
-chr21	16627286	chr21:16627286:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:2,0,3:6:38,44,95,0,34,21	1/2:0,1,2:4:54,28,25,17,0,8	1/2:1,3,4:8:118,41,58,34,0,29
-chr21	16632173	chr21:16632173:M	TTTTTTTTTTTTTTT	<18>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8,0:9:255,24,0,255,13,252	1/2:0,8,3:13:255,79,65,228,0,229	2/2:0,0,4:7:149,136,132,18,8,0
-chr21	16634217	chr21:16634217:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,8:15:102,0,84	0/1:13,11:27:131,0,159	1/1:1,20:24:255,51,0
-chr21	16640784	chr21:16640784:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,25,0:26:255,75,0,255,76,255	1/2:0,4,8:14:255,148,113,71,0,42	1/1:0,27,1:29:255,84,0,255,67,255
-chr21	16653910	chr21:16653910:M	AAAAAAAAAAAAAAAAAAAAA	<16>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,2:13:255,31,14,255,0,255	1/1:0,5,0:6:157,18,0,157,18,157	2/2:1,0,5:6:63,80,150,2,18,0
-chr21	16658293	chr21:16658293:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,6,0:20:255,169,131,255,0,255,255,106,255,255	1/3:0,18,0,16:38:255,255,255,255,255,255,255,0,255,255	2/2:0,0,12,0:15:255,255,255,45,45,0,255,255,44,250
-chr21	16659712	chr21:16659712:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,17:31:228,0,154	0/1:31,17:49:157,0,255	1/1:2,38:41:255,84,0
-chr21	16663247	chr21:16663247:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:32:216,0,175	0/1:15,22:37:255,0,155	0/0:42,1:43:0,108,255
-chr21	16671838	chr21:16671838:M	TATTCTATCCATATTCTATTCT	<2.2>	.	.	Motif=TATTC	GT:AD:DP:PL	0/1:23,27:50:255,0,255	0/1:18,25:43:255,0,255	0/0:28,0:28:0,84,255
-chr21	16673104	chr21:16673104:M	ACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,16:32:255,0,255	0/1:15,7:23:127,0,255	0/0:28,0:29:0,87,255
-chr21	16682666	chr21:16682666:M	TATATATATATATATATATATATAT	<10>,<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,5,14:29:172,90,255,0,0,12	0/0:5,0,0:5:0,15,135,14,76,62	1/2:3,4,6:15:130,45,123,36,0,33
-chr21	16682690	chr21:16682690:M	TTTTTTTTTTT	<10>,<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/3:13,0,0,10:24:247,255,255,252,255,255,0,187,184,255	1/2:3,3,4,0:10:35,21,84,7,0,58,64,102,84,227	3/3:0,0,0,5:8:194,197,202,163,164,150,23,24,18,0
-chr21	16683234	chr21:16683234:M	CTCTCTCTCTCCCTCTGTCTCTCTCTCTCTCTCTC	<16.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:0,29:29:255,85,0	1/1:0,30:30:255,89,0
-chr21	16687644	chr21:16687644:M	AAAGAAAGAAAGAAAGAAA	<5.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:15,10:28:127,0,223	0/1:14,13:30:161,0,190	0/1:10,15:27:206,0,125
-chr21	16687752	chr21:16687752:M	TTTTTTTATTTTTATTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:35:199,0,255	0/1:15,14:29:164,0,182	0/1:20,19:39:235,0,254
-chr21	16689770	chr21:16689770:M	AAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:130,15,0	0/1:1,1:3:27,0,19	.
-chr21	16697281	chr21:16697281:M	ATTATTATTATT	<6>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,42:45:255,126,0	1/1:0,29:33:255,87,0	1/1:0,35:40:255,105,0
-chr21	16704013	chr21:16704013:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,52:52:255,152,0	1/1:0,49:49:255,142,0	1/1:0,55:55:255,160,0
-chr21	16710054	chr21:16710054:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:31:74,0,255	0/1:11,17:31:205,0,131	0/0:37,0:39:0,114,255
-chr21	16711351	chr21:16711351:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:15,0,60	0/1:1,4:6:50,0,9	0/1:5,7:12:85,0,51
-chr21	16714249	chr21:16714249:M	TATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,4:4:122,12,0	1/1:0,9:9:255,27,0
-chr21	16721263	chr21:16721263:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,44:44:255,130,0	1/1:0,39:39:255,115,0
-chr21	16730365	chr21:16730365:M	TTATTATTATTATTATTATTATTATTATTATTAT	<12.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10:10:189,30,0	0/1:5,2:8:12,0,76	0/1:10,7:17:79,0,135
-chr21	16743187	chr21:16743187:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:46:0,135,255	0/1:23,18:44:214,0,255	0/1:27,16:45:166,0,255
-chr21	16743301	chr21:16743301:M	TCTCTCTCTCTCTCTCTCTCTCACTCCCCTTTCTCTCTCTC	<19.5>,<21.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,16,0:17:255,50,0,255,51,255	1/2:0,15,11:27:255,193,234,255,0,255	1/2:0,9,15:24:255,255,255,163,0,186
-chr21	16751556	chr21:16751556:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,8:12:206,119,107,61,0,29	1/2:2,5,7:15:196,66,97,59,0,53	1/2:2,13,9:26:255,98,106,198,0,165
-chr21	16752589	chr21:16752589:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:25,22:47:255,0,255	0/1:20,17:38:206,0,255
-chr21	16755802	chr21:16755802:M	CCAAAAACAAAACAAAACAAAACCAAAAC	<1.5>	.	.	Motif=CCAAAA	GT:AD:DP:PL	0/0:29,1:31:0,65,255	0/1:13,5:19:81,0,255	0/0:34,1:39:0,77,255
-chr21	16764388	chr21:16764388:M	GTGTGTGTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:34:0,102,255	0/1:10,3:16:76,0,222	0/1:13,15:31:255,0,255
-chr21	16764407	chr21:16764407:M	TATATATATATATAATATATATATATGCACATATATATAT	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:7,2:9:9,0,99	0/1:12,11:32:109,0,255
-chr21	16764523	chr21:16764523:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGGTTTTG	<6.2>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/1:12,5:17:41,0,168	0/1:10,5:15:50,0,144
-chr21	16798416	chr21:16798416:M	AAAAAAAAAAAAAAAAAAAAAAAA	<12>,<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,1,4:5:83,94,131,58,69,55,17,17,0,3	0/2:4,0,4,3:11:88,111,252,0,113,90,24,91,24,59	1/2:0,19,2,1:24:255,60,11,255,0,255,255,25,255,255
-chr21	16818070	chr21:16818070:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:20:0,56,255	0/1:7,9:18:210,0,146	0/1:7,13:25:255,0,141
-chr21	16823200	chr21:16823200:M	TTCTCTTCTTTCTTCTTTCTTCTTTCTT	<1.8>	.	.	Motif=TTCT	GT:AD:DP:PL	0/0:35,4:39:0,11,255	0/1:10,12:22:254,0,191	0/1:20,13:33:247,0,255
-chr21	16825838	chr21:16825838:M	TATAGATATAGATAGATAGAGATATAGATATAGATACAGATATATAGATATAGATATA	<8.7>	.	.	Motif=TATAGA	GT:AD:DP:PL	0/1:11,10:21:130,0,149	0/1:8,7:15:82,0,100	0/0:20,0:20:0,59,255
-chr21	16829173	chr21:16829173:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,3:3:88,9,0	1/1:0,4:5:107,4,0
-chr21	16856678	chr21:16856678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:44:0,129,255	0/1:27,16:45:159,0,255	0/0:44,2:47:0,102,255
-chr21	16860273	chr21:16860273:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:2,32:34:255,65,0	1/1:2,41:43:255,90,0
-chr21	16860874	chr21:16860874:M	TTTTCTTTTTTTTTTTTTTTTTT	<22>,<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,8,1,4:17:213,86,82,191,49,255,137,0,216,233	2/3:3,2,6,8:21:204,198,255,64,64,83,16,39,0,85	1/3:2,10,1,6:23:255,120,120,255,79,255,173,0,255,255
-chr21	16866229	chr21:16866229:M	AAAAAAGAAAAAACAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:25:151,0,170	0/1:15,13:28:148,0,183	0/1:11,22:34:255,0,101
-chr21	16879285	chr21:16879285:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:8:224,24,0	1/1:0,24:25:255,72,0	1/1:0,4:5:126,15,0
-chr21	16880537	chr21:16880537:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,18:31:248,0,128	1/1:3,24:30:255,35,0	0/1:13,15:29:193,0,147
-chr21	16907243	chr21:16907243:M	AAAAATTAAAAATAAAAAAAAATAAAAATAAAAA	<5.5>	.	.	Motif=AAAAAT	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,15:15:255,45,0	1/1:0,24:24:255,72,0
-chr21	16907529	chr21:16907529:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:32:0,91,255	0/1:18,10:29:99,0,228	0/0:23,0:25:0,73,255
-chr21	16920035	chr21:16920035:M	TGTGTGTGTGT	<15.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:23,0,9:35:181,225,255,0,255,255	0/0:49,0,0:49:0,147,255,147,255,255	1/2:0,12,8:23:255,229,188,255,0,255
-chr21	16925983	chr21:16925983:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAGAAAAAAAA	<42>,<43>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4,0:4:113,12,0,80,12,69	2/2:0,0,1:2:15,16,17,2,3,0	2/2:0,0,6:6:102,102,102,18,18,0
-chr21	16929294	chr21:16929294:M	TGAATGAATGAATGAATGAATGAA	<7>	.	.	Motif=TGAA	GT:AD:DP:PL	0/1:9,14:23:202,0,106	0/0:15,0:15:0,44,255	1/1:0,19:19:255,56,0
-chr21	16930625	chr21:16930625:M	TTTTTTTTTTTTTTGTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,1,16:42:255,255,255,0,255,255	0/0:24,0,0:26:0,75,255,75,255,255	1/2:0,23,16:40:255,255,170,255,0,255
-chr21	16930715	chr21:16930715:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:27:214,0,129	0/0:30,1:33:0,78,255	1/1:3,39:43:255,71,0
-chr21	16931315	chr21:16931315:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:33:0,54,255	0/0:29,2:31:0,59,255	1/1:0,6:8:91,17,0
-chr21	16937042	chr21:16937042:M	ATTTCTATTTCTATTTTTATTT	<3>	.	.	Motif=ATTTCT	GT:AD:DP:PL	0/0:42,2:44:0,83,255	0/1:31,5:36:15,0,255	0/1:13,6:19:86,0,255
-chr21	16941111	chr21:16941111:M	TTGTTTTTTTTTTTTTTTTGCTTTTGTTTTTGTTTTT	<6.3>	.	.	Motif=TTGTTT	GT:AD:DP:PL	0/0:6,1:8:0,4,104	0/0:8,1:11:0,12,148	0/1:7,3:10:27,0,104
-chr21	16941750	chr21:16941750:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:29,2:34:0,64,255	0/1:18,18:37:218,0,219
-chr21	16957263	chr21:16957263:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:46,6:52:0,45,255	0/0:31,0:31:0,91,255	0/1:14,18:33:229,0,150
-chr21	16970937	chr21:16970937:M	ATAATATAATATATTGTACATATTACATACTATAATATATTGTACATATTACATAACATAATATATTGTACATATTACATAATATAATATA	<2.6>	.	.	Motif=ATAAT	GT:AD:DP:PL	1/1:0,3:3:108,9,0	.	1/1:0,1:1:36,3,0
-chr21	16971741	chr21:16971741:M	ACATAACATAA	<1.8>	.	.	Motif=ACATA	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/0:9,0:9:0,27,243	0/1:6,3:9:54,0,135
-chr21	16975449	chr21:16975449:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:231,0,213	1/1:2,18:21:255,26,0	0/1:20,15:36:175,0,255
-chr21	16977305	chr21:16977305:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<18>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,24,0:24:255,72,0,255,71,255	1/1:0,20,1:21:255,63,0,255,44,255	1/2:0,15,12:27:255,220,142,255,0,198
-chr21	16996795	chr21:16996795:M	AGAGAGAGAGATAGAGAGAGAGAGA	<13.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/0:35,0:35:0,103,255	0/1:17,19:36:246,0,209
-chr21	17004191	chr21:17004191:M	TTTTTTTTTTTTTCTTTCTTTCTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:34:255,99,0	0/1:13,9:23:177,0,255	1/1:0,41:43:255,126,0
-chr21	17010741	chr21:17010741:M	GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<17.2>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,3:5:70,4,0	0/0:0,0:4:0,2,4	1/1:0,1:3:38,3,0
-chr21	17010817	chr21:17010817:M	GGAGGGAAGGGGAGGGGATGGGAGGGGAGGGAAGGGAAGGG	<7.2>	.	.	Motif=GGAGG	GT:AD:DP:PL	1/1:0,18:19:255,42,0	1/1:0,15:15:253,44,0	0/1:6,10:16:126,0,56
-chr21	17021336	chr21:17021336:M	TCTCTCTCTCTTTCTCTCTCTCTCTCTC	<12>	.	.	Motif=TC	GT:AD:DP:PL	0/0:16,1:18:0,24,255	0/1:16,14:39:255,0,255	0/0:35,0:36:0,108,255
-chr21	17022773	chr21:17022773:M	AATAATAATAATAATAATAATAATAATGATAATAATAATAATAATAAT	<18>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/0:14,0:14:0,42,255	0/1:8,12:21:255,0,168
-chr21	17027733	chr21:17027733:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAAGAAAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:155,18,0	1/1:0,6:8:195,23,0	0/1:2,1:5:12,0,65
-chr21	17031911	chr21:17031911:M	GAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAATAGAAT	<11.8>,<14.8>	.	.	Motif=GAATA	GT:AD:DP:PL	1/2:0,2,6:10:230,160,149,69,0,51	1/1:0,16,0:16:255,48,0,255,48,255	2/2:0,0,11:11:255,255,255,33,33,0
-chr21	17036135	chr21:17036135:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,2:37:0,72,255	0/0:13,0:16:0,46,255	0/1:12,8:21:78,0,158
-chr21	17040295	chr21:17040295:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,13:15:255,255,253,39,43,0	1/2:0,13,9:24:255,152,96,218,0,155	0/2:4,1,7:16:168,97,206,0,98,96
-chr21	17046109	chr21:17046109:M	ATATTATATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:31,13:44:128,0,255	1/1:0,24:24:255,71,0	0/0:40,0:40:0,118,255
-chr21	17046773	chr21:17046773:M	TCTTTTCTATCTTTTCTTTT	<2.2>	.	.	Motif=TCTTT	GT:AD:DP:PL	0/1:10,30:40:255,0,153	1/1:0,42:42:255,126,0	0/0:21,0:21:0,63,255
-chr21	17046900	chr21:17046900:M	TTTTTCTTTTTCTTTTTTTTTTTTTGTTTTTTTGTTTTTT	<41>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:18,0,125	0/0:17,0:17:0,50,255	0/1:2,5:7:67,0,14
-chr21	17069141	chr21:17069141:M	TATATATATATATATATACACATATATATGTGTGTATATATATATACATATATATATATATATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,13:17:255,2,0	1/1:0,23:27:255,81,0	.
-chr21	17082939	chr21:17082939:M	CACACACACAGACACACGCACACACACAGACACACGCGCACACACACACACAC	<28.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/0:12,0:12:0,36,255	0/1:8,5:15:113,0,180
-chr21	17085170	chr21:17085170:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:5:180,14,0	1/1:0,1:1:28,3,0	1/1:0,0:3:34,8,0
-chr21	17085264	chr21:17085264:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	0/2:4,2,7:15:162,50,116,0,81,99	0/0:2,0,0:4:0,9,55,9,60,71	1/1:0,5,1:7:113,18,0,58,8,49
-chr21	17085319	chr21:17085319:M	TATCTATCTATCTATCTATCTAT	<6.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/0:9,0:9:0,27,174	.	0/1:9,14:23:195,0,101
-chr21	17087610	chr21:17087610:M	GAAGAAAAAGAAGAAGAAAAGAAGAGGAAGAAGAAAAAGGAGGAGGAGGAGGGGAAGGAGAAGAATTATAAGAAGAAAAGAAGAGCAAGAGGAAGAAGAAG	<13>	.	.	Motif=GAA	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,9:10:255,27,0	1/1:0,7:10:248,21,0
-chr21	17096524	chr21:17096524:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,20:37:255,0,191	0/1:17,21:39:255,0,187	0/1:26,27:53:255,0,255
-chr21	17100349	chr21:17100349:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<29>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6:10:142,74,145,84,0,67	2/2:0,0,2:2:24,30,59,6,6,0	1/2:0,1,0:3:40,16,13,23,0,18
-chr21	17100380	chr21:17100380:M	AATAATAATAATAATAATAATAATAAT	<8>,<11.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/2:4,0,4:15:104,80,126,0,18,103	0/1:7,0,0:9:4,0,83,29,108,217	1/2:0,13,1:17:220,52,16,204,0,255
-chr21	17112081	chr21:17112081:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,16,0:20:255,255,217,55,1,0,255,228,54,255	2/3:1,1,20,8:30:255,255,255,94,124,56,255,253,0,253	1/2:3,11,13,0:29:255,134,149,112,0,121,255,148,160,255
-chr21	17116180	chr21:17116180:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,10:12:142,0,0	0/1:8,9:19:117,0,80	1/1:2,10:13:139,0,0
-chr21	17116493	chr21:17116493:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,3:12:255,49,16,124,0,94	1/1:0,4,0:4:120,12,0,73,12,62	2/2:0,0,0:4:0,0,0,0,0,0
-chr21	17118409	chr21:17118409:M	AAAAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,3,28:32:255,255,255,95,40,0	0/2:6,1,8:15:194,117,254,0,145,136	1/2:0,21,18:41:255,255,195,255,0,255
-chr21	17120247	chr21:17120247:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,20:35:255,0,169	0/0:25,2:28:0,46,255	0/1:19,17:36:205,0,241
-chr21	17127850	chr21:17127850:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:40:255,118,0	0/1:21,15:37:167,0,255	1/1:3,49:55:255,104,0
-chr21	17130693	chr21:17130693:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,55:55:255,163,0	0/1:32,20:52:212,0,255	1/1:0,58:58:255,171,0
-chr21	17135247	chr21:17135247:M	AAAAAAAGAAAGAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	0/1:16,9:25:87,0,210	1/1:0,36:37:255,109,0
-chr21	17138814	chr21:17138814:M	GAAGGAAGGAAGGAAGGAAGGAAG	<10>,<11>,<12>	.	.	Motif=GAAG	GT:AD:DP:PL	1/2:0,6,6,0:12:255,114,80,114,0,80,255,98,114,255	0/1:21,9,0,0:30:179,0,255,161,255,255,238,255,255,255	2/3:0,0,8,11:19:255,255,255,204,203,150,149,127,0,94
-chr21	17138835	chr21:17138835:M	AAGCAAGAAAGCAAGC	<3>	.	.	Motif=AAGC	GT:AD:DP:PL	1/1:0,26:26:255,76,0	0/1:21,20:41:198,0,215	1/1:0,34:34:255,99,0
-chr21	17143208	chr21:17143208:M	GTGTGTGTGTGTGTGTGTGT	<12>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,14:30:255,0,255	0/0:39,0:40:0,120,255	0/1:15,13:30:255,0,255
-chr21	17144737	chr21:17144737:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:45:0,132,255	0/0:29,0:31:0,90,255	0/1:27,19:46:213,0,255
-chr21	17145268	chr21:17145268:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:31:255,72,0	0/1:15,10:27:105,0,192	1/1:0,31:31:255,91,0
-chr21	17146907	chr21:17146907:M	TGTTTTTTGTTTGTTTTTTTG	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,17:18:174,45,0	0/1:14,5:19:1,0,94	1/1:0,20:21:205,52,0
-chr21	17146930	chr21:17146930:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:10:222,21,0	0/0:4,0:5:0,12,127	1/1:0,5:6:185,10,0
-chr21	17168174	chr21:17168174:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:41:244,0,255	0/1:19,15:34:170,0,242	0/1:26,12:39:109,0,255
-chr21	17170900	chr21:17170900:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,3:34:0,45,255	0/0:36,4:40:0,47,255	0/1:23,31:59:255,0,254
-chr21	17174288	chr21:17174288:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:81,0,12	0/0:5,0:6:0,17,93	0/1:3,4:10:57,0,32
-chr21	17175314	chr21:17175314:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:44:0,111,255	0/0:42,1:44:0,111,255	0/1:28,20:50:228,0,255
-chr21	17176332	chr21:17176332:M	AAAAAAAAAAAAAAAAAGAAAAA	<17>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,15:19:216,255,255,0,72,16	0/2:3,0,14:17:190,237,255,0,52,2	1/1:2,20,0:24:255,9,0,255,37,255
-chr21	17178914	chr21:17178914:M	AAAAAAAAAAAAAAAAAAA	<13>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,13,11:25:255,255,255,201,202,131,227,226,0,154	0/2:8,0,11,0:23:255,255,255,0,253,220,193,255,254,255	1/3:0,20,0,8:29:255,249,190,255,146,255,255,0,255,255
-chr21	17186567	chr21:17186567:M	AAAAAAAAAAGAAAAAAGAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:28:248,0,255	1/1:0,22:25:255,66,0	0/1:17,15:32:255,0,255
-chr21	17197324	chr21:17197324:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:37:0,71,255	0/0:40,1:42:0,105,255	0/1:30,20:50:218,0,255
-chr21	17199969	chr21:17199969:M	ACACACACAGACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,17:36:255,0,255	0/0:33,0:33:0,99,255	1/1:2,28:32:255,43,0
-chr21	17224632	chr21:17224632:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<16.5>,<19.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4,0:5:122,12,0,121,11,120	1/1:0,3,0:3:92,9,0,92,9,92	2/2:0,0,3:4:91,91,91,10,10,0
-chr21	17235566	chr21:17235566:M	AAAAAATAAAAAAAAAAAAAGAAAGAAAAGAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,81,255	0/0:29,0:29:0,87,255	0/1:10,9:21:179,0,208
-chr21	17237590	chr21:17237590:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:47,2:51:0,114,255	0/1:20,17:39:209,0,255
-chr21	17254117	chr21:17254117:M	AAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:9:42,0,129	0/1:0,1:2:23,0,6	0/1:2,3:6:76,0,41
-chr21	17254229	chr21:17254229:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,2:44:0,91,255	0/1:16,16:32:197,0,195	0/1:19,28:47:255,0,218
-chr21	17262071	chr21:17262071:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20:37:255,0,179	0/1:15,15:31:181,0,174	0/0:37,0:38:0,111,255
-chr21	17266847	chr21:17266847:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,88,0	0/1:15,13:28:145,0,180	1/1:1,33:35:255,82,0
-chr21	17278372	chr21:17278372:M	AAAAAAAAAAAGAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,98,0	0/1:20,22:43:255,0,231	1/1:0,50:50:255,147,0
-chr21	17279810	chr21:17279810:M	GGGGGGGGGGGGG	<10>,<11>,<12>	.	.	Motif=G	GT:AD:DP:PL	1/3:0,9,0,7:16:255,107,135,229,106,203,227,0,139,199	3/3:0,0,0,4:5:49,63,109,52,74,63,3,13,12,0	1/2:0,9,5,0:14:255,77,37,140,0,99,255,64,138,255
-chr21	17283477	chr21:17283477:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:145,16,0	0/1:7,12:24:129,0,82	1/1:2,11:16:153,3,0
-chr21	17284947	chr21:17284947:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,45:45:255,131,0	0/1:12,22:34:248,0,91	1/1:0,35:35:255,102,0
-chr21	17289553	chr21:17289553:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,11:16:149,0,34	0/0:10,2:13:0,4,144	0/1:10,10:26:146,0,109
-chr21	17291500	chr21:17291500:M	TTTTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,12:24:255,218,255,254,0,212	0/1:6,14,0:21:255,0,115,255,102,255	1/2:2,14,8:27:255,110,182,255,0,255
-chr21	17305413	chr21:17305413:M	TTTTTATTTTTTTATTTTTTTTTTTTAATTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,11:22:255,199,137,200,0,137	0/2:8,0,9:17:210,154,255,0,209,183	1/2:0,4,8:12:255,141,108,71,0,37
-chr21	17308259	chr21:17308259:M	AAAAAAAAAAAAAACAAAAAAAAACAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:7,17:25:255,0,136	1/1:0,30:33:255,98,0
-chr21	17317336	chr21:17317336:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,4:10:178,68,67,54,0,34	0/2:3,0,3:7:64,51,130,0,80,66	1/2:0,10,3:16:255,51,15,181,0,144
-chr21	17321418	chr21:17321418:M	AAAAAATAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,10:22:111,0,127	0/1:25,5:31:2,0,255	0/1:6,15:24:205,0,34
-chr21	17326063	chr21:17326063:M	ACACACACACACACACACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,13:15:255,44,0	1/1:0,14:17:255,50,0	1/1:0,19:20:255,60,0
-chr21	17333813	chr21:17333813:M	TATATATATATATATATATAGTATATATATAGTATA	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,38:38:255,112,0	0/1:2,2:4:24,0,24	1/1:0,16:17:255,50,0
-chr21	17335836	chr21:17335836:M	TTTTTCTTTTCTTTTTCTCTTTCTTTTTTTTTTTTTTTTTTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:112,12,0	.	1/1:0,2:4:69,9,0
-chr21	17336845	chr21:17336845:M	AAATAAATAAATAAATAAATAAA	<6.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,20:41:137,0,79	0/0:18,0:25:0,58,238	0/1:10,5:22:9,0,96
-chr21	17337857	chr21:17337857:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:6,14:23:255,0,122	0/1:19,8:33:140,0,255	0/1:15,8:27:173,0,255
-chr21	17349582	chr21:17349582:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,22:39:255,0,255	0/1:10,14:28:255,0,199	0/1:22,10:37:180,0,255
-chr21	17352726	chr21:17352726:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,15:21:255,0,21	0/1:3,11:18:255,0,41	0/1:5,16:23:255,0,82
-chr21	17354984	chr21:17354984:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,29:45:255,0,157	0/1:13,13:27:161,0,151	0/1:16,26:45:255,0,170
-chr21	17357071	chr21:17357071:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:26,15:41:75,0,215	0/1:20,14:34:79,0,153	0/1:20,21:41:149,0,137
-chr21	17358528	chr21:17358528:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTATGTGTGCGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,19:35:253,0,186	0/1:8,12:20:154,0,83	0/1:11,9:20:105,0,142
-chr21	17361803	chr21:17361803:M	AAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:21:255,0,125	0/0:12,0:17:0,50,255	0/1:2,10:14:255,0,35
-chr21	17362108	chr21:17362108:M	AAAAAAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,13,7:25:255,70,164,255,0,255	2/2:2,0,20:24:255,255,255,26,68,0	1/2:1,21,7:34:255,110,124,255,0,255
-chr21	17362535	chr21:17362535:M	AAAATTAAAATT	<1.8>	.	.	Motif=AAAATT	GT:AD:DP:PL	0/1:19,19:39:255,0,255	1/1:0,32:32:255,96,0	0/1:14,21:35:255,0,214
-chr21	17364310	chr21:17364310:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<11>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,8,7:15:246,133,161,151,0,189	0/2:3,0,6:9:83,108,203,0,46,28	1/2:0,13,9:22:255,165,193,240,0,255
-chr21	17367127	chr21:17367127:M	AAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,3:6:65,52,89,0,52,69	0/1:1,5,1:8:71,0,4,54,7,83	0/1:2,2,0:7:18,0,40,20,43,85
-chr21	17367301	chr21:17367301:M	AAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2,0:4:65,7,0,42,6,36	2/2:0,1,7:8:236,125,102,24,6,0	1/2:0,3,1:7:143,27,9,71,0,56
-chr21	17369908	chr21:17369908:M	ATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,9:25:154,0,183	0/0:16,0:16:0,48,255	0/1:21,13:41:199,0,255
-chr21	17369929	chr21:17369929:M	TATATATATATA	<7>,<8>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,1,3:4:78,38,27,11,0,2	1/1:1,5,0:6:50,4,0,53,17,74	0/2:26,0,4:30:11,44,255,0,255,255
-chr21	17369969	chr21:17369969:M	TATATATATATATACATGTATATATATATATAT	<4.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:3,12:15:255,0,32	1/1:0,10:12:255,36,0	0/1:22,7:29:248,0,255
-chr21	17371646	chr21:17371646:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,11:31:255,171,111,255,0,255	1/1:0,30,0:31:255,93,0,255,91,255	0/2:18,2,8:28:82,86,255,0,255,242
-chr21	17372825	chr21:17372825:M	AAGAAGAAGAAGAAGAAGAAGAAG	<7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,40:41:255,119,0	0/1:15,23:38:255,0,170
-chr21	17375206	chr21:17375206:M	AGAGACAGAGACA	<1.8>	.	.	Motif=AGAGAC	GT:AD:DP:PL	0/1:21,6:27:87,0,255	1/1:0,37:37:255,111,0	0/0:47,0:47:0,141,255
-chr21	17381934	chr21:17381934:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>,<8.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,16,0,7:23:255,127,150,255,193,255,255,0,255,255	1/1:0,14,0,0:14:255,42,0,255,41,243,255,42,255,255	2/3:0,0,12,7:19:255,255,255,123,196,156,212,212,0,255
-chr21	17384220	chr21:17384220:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:143,18,0	.	0/1:14,17:33:255,0,255
-chr21	17384974	chr21:17384974:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,21,26:48:255,255,255,255,0,255	2/2:1,0,37:38:255,255,255,94,111,0	1/1:3,36,0:39:255,59,0,255,108,255
-chr21	17387683	chr21:17387683:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23,0:41:255,0,255,255,255,255	1/2:1,14,12:28:255,191,141,214,0,165	0/0:48,0,0:50:0,150,255,150,255,255
-chr21	17387964	chr21:17387964:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,14:42:146,0,255	0/0:25,0:27:0,78,255	0/1:19,13:33:139,0,255
-chr21	17391508	chr21:17391508:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,12:16:161,0,22	0/1:5,9:15:106,0,48	0/1:17,9:26:77,0,213
-chr21	17401499	chr21:17401499:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:22:93,0,160	1/1:1,35:41:255,89,0	0/0:27,2:30:0,51,255
-chr21	17407281	chr21:17407281:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,44:44:255,129,0	1/1:0,47:47:255,138,0
-chr21	17411233	chr21:17411233:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:16:0,47,255	0/1:5,8:13:98,0,47	0/0:15,1:17:0,32,255
-chr21	17422621	chr21:17422621:M	TTTGTTTGTTTGTTGTTTGTTGTTTTTTTTTTGT	<8.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:2,32:35:255,57,0	1/1:0,20:20:255,60,0
-chr21	17422802	chr21:17422802:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,12,0:35:125,0,255,194,255,255	1/2:0,13,8:21:255,141,81,195,0,171	0/0:33,1,0:35:0,84,255,102,255,255
-chr21	17423415	chr21:17423415:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:29:255,66,0	1/1:2,24:26:255,41,0	1/1:3,32:35:255,49,0
-chr21	17423597	chr21:17423597:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,5:16:42,0,148	0/0:18,0:18:0,53,255	0/1:18,4:23:3,0,254
-chr21	17425955	chr21:17425955:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,35:37:255,72,0	1/1:1,35:37:255,91,0	1/1:1,47:48:255,123,0
-chr21	17426908	chr21:17426908:M	AATAAATAAATAAATAAATAAATAAATAAATAA	<10.2>,<11.2>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,7,9:16:255,173,128,134,0,89	1/1:0,16,0:16:255,48,0,255,47,255	2/2:0,0,21:21:255,255,255,63,62,0
-chr21	17428199	chr21:17428199:M	TTTTTCTTTTTTTTTCTTTTTTTTT	<26>,<27>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,2:4:79,35,24,30,0,24	0/1:2,4,0:7:47,0,24,56,42,117	1/2:0,4,5:9:181,85,61,58,0,43
-chr21	17428635	chr21:17428635:M	AGTGCAGTGGAGTGCAGTGGAGTGCAGTGGAGTGCAGTGAAGTG	<6.8>	.	.	Motif=AGTGC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,26:26:255,78,0	1/1:0,32:32:255,96,0
-chr21	17429806	chr21:17429806:M	AAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,19:29:255,255,255,105,0,71	1/1:0,19,0:19:255,57,0,255,56,255	2/2:0,0,37:37:255,255,255,111,109,0
-chr21	17432731	chr21:17432731:M	GAAGGAAGGAAGGGAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGAAGG	<10.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:1,2:6:52,0,11	0/1:1,3:4:61,0,13	0/0:12,1:15:0,18,255
-chr21	17433559	chr21:17433559:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,43,0:43:255,129,0,255,127,255	1/1:0,34,0:36:255,108,0,255,105,255	1/2:0,17,13:30:255,200,149,255,0,222
-chr21	17434908	chr21:17434908:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAA	<41>,<42>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,2,10:13:255,187,153,38,2,0	2/2:0,0,9:10:255,178,154,26,26,0	1/2:0,7,6:13:255,105,67,123,0,85
-chr21	17436178	chr21:17436178:M	GGAAGGAAGGAAGGAAGGAAGGAAGG	<4.5>,<5.5>	.	.	Motif=GGAA	GT:AD:DP:PL	2/2:2,0,5:8:37,30,60,0,11,0	1/2:0,1,5:7:67,38,32,19,0,1	0/1:1,3,0:5:60,0,5,37,8,35
-chr21	17436201	chr21:17436201:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAGGGAGGAGAGG	<8>,<13>	.	.	Motif=AGGG	GT:AD:DP:PL	1/2:0,0,2:3:53,46,46,9,0,5	1/1:0,3,0:3:90,9,0,90,9,90	2/2:0,0,3:3:75,78,81,9,9,0
-chr21	17439342	chr21:17439342:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,11:28:255,207,128,255,0,243	1/1:1,32,1:34:255,82,0,255,82,255	0/2:26,0,22:48:255,255,255,0,255,255
-chr21	17440352	chr21:17440352:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,35:37:255,108,0	0/1:20,16:37:255,0,255
-chr21	17441929	chr21:17441929:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,24:26:255,48,0	1/1:2,26:30:255,52,0	0/1:28,14:45:153,0,255
-chr21	17443967	chr21:17443967:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTG	<21>,<27>,<28>,<29>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,7,3,7:18:255,255,255,202,203,168,178,198,79,149,126,199,0,75,162	3/4:0,0,0,4,6:10:255,255,255,223,224,207,98,98,97,69,65,66,54,0,36	1/2:1,11,2,0,0:17:255,6,34,255,0,255,255,45,255,255,255,68,255,255,255
-chr21	17454010	chr21:17454010:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,3,0,3:7:168,81,70,106,53,89,84,0,53,73	1/2:0,0,3,0:4:97,51,40,11,0,1,63,42,11,54	1/3:0,1,1,2:4:93,54,48,37,20,26,30,0,3,21
-chr21	17456517	chr21:17456517:M	AAAAAAAAAAAGAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,18,18:39:255,255,233,248,0,243	0/2:19,0,13:34:255,224,255,0,255,255	1/2:0,16,9:26:255,170,99,246,0,216
-chr21	17456963	chr21:17456963:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,24:24:255,71,0	1/1:1,35:36:255,88,0
-chr21	17457248	chr21:17457248:M	TTTTTTGTTTTTTGGTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,56,0	1/1:0,21:21:255,62,0	1/1:0,26:26:255,76,0
-chr21	17461784	chr21:17461784:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,7:8:212,124,102,24,6,0	1/2:1,1,5:9:144,54,59,10,0,16	1/2:0,3,5:10:204,83,68,48,0,24
-chr21	17462831	chr21:17462831:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,34:34:255,100,0	1/1:0,38:39:255,114,0
-chr21	17463131	chr21:17463131:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,6,0:8:159,0,5,112,17,111	1/2:1,3,5:11:135,53,67,43,0,33	1/2:3,8,5:18:228,22,66,101,0,107
-chr21	17464192	chr21:17464192:M	TTTTTTTGTTTTTGTTTTGTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:16:82,0,119	0/0:27,0:29:0,84,255	0/1:9,12:23:158,0,104
-chr21	17465277	chr21:17465277:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,19:38:243,0,243	0/0:25,1:27:0,51,255	0/1:12,20:32:255,0,124
-chr21	17466224	chr21:17466224:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,14:38:164,0,255	0/0:55,0:55:0,162,255	0/1:21,15:36:180,0,255
-chr21	17468375	chr21:17468375:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:71,12,0	0/1:3,8:13:115,0,15	1/1:1,6:10:119,9,0
-chr21	17470402	chr21:17470402:M	TTTTTTTTTTTTTTTTTTTTGTCTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:11:255,32,0	1/1:0,6:6:167,18,0	1/1:0,9:9:245,27,0
-chr21	17471023	chr21:17471023:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:1,17:20:255,41,0	1/1:2,12:15:179,9,0
-chr21	17476109	chr21:17476109:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,10:23:120,185,255,0,206,176	1/2:1,15,10:29:255,166,219,255,0,255	0/0:29,0,0:29:0,85,255,85,255,255
-chr21	17477581	chr21:17477581:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:25:138,0,151	0/0:13,1:18:0,34,252	0/1:18,4:22:7,0,255
-chr21	17478343	chr21:17478343:M	TTATTTATTTATTTAATTAATTAATTAATTTATTTATTTATTTATTT	<12.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:18,0:18:0,53,255	0/1:9,3:12:21,0,134
-chr21	17482556	chr21:17482556:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<11.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:6,7,0:14:105,0,75,142,99,255	0/1:4,4,0:8:49,0,49,71,61,162	0/2:4,0,3:7:36,55,141,0,64,55
-chr21	17484141	chr21:17484141:M	ATATATATATATATATATTTATATATATAT	<10>,<10.5>,<11>,<12>,<17>	.	.	Motif=AT	GT:AD:DP:PL	1/5:0,4,0,0,0,5:11:214,105,126,131,136,153,168,140,164,191,213,141,167,203,241,106,0,26,62,107,102	2/4:0,0,3,0,7,1:12:249,163,159,106,116,95,90,97,81,78,37,14,0,13,24,228,139,82,66,13,226	1/3:0,8,0,8,0,0:17:255,110,60,88,27,37,121,0,35,72,255,87,84,118,255,255,110,88,121,255,255
-chr21	17485034	chr21:17485034:M	TTTGTTTTTGTTTTTTTTTGTTTTGTTTTGTTTT	<6.6>	.	.	Motif=TTTGT	GT:AD:DP:PL	0/1:17,9:26:130,0,255	0/1:11,10:21:166,0,181	1/1:0,23:23:255,69,0
-chr21	17485435	chr21:17485435:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,22:39:255,0,185	0/1:14,18:32:225,0,155	0/0:43,1:46:0,117,255
-chr21	17486649	chr21:17486649:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:13:70,0,70	0/0:5,1:6:0,1,68	0/1:6,10:17:125,0,65
-chr21	17487433	chr21:17487433:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,1,15,5:21:255,255,255,76,71,28,255,206,0,217	1/2:0,5,21,0:26:255,255,255,86,0,9,255,255,84,255	1/3:0,9,1,10:22:255,175,233,255,157,255,255,0,149,218
-chr21	17487622	chr21:17487622:M	ACACACACACATACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:31:255,92,0	0/1:20,17:37:201,0,254	0/1:16,16:32:207,0,207
-chr21	17490960	chr21:17490960:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,5:13:251,90,53,123,0,108	1/1:2,10,1:13:150,3,0,130,20,178	1/2:0,2,8:11:225,134,113,23,0,7
-chr21	17500028	chr21:17500028:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:1,18:22:255,44,0	1/1:0,16:18:255,52,0
-chr21	17502090	chr21:17502090:M	TTTTCTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:10,3,0	0/1:1,3:5:45,0,2	1/1:0,0:2:20,5,0
-chr21	17504104	chr21:17504104:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:9,0,168	0/0:3,0:4:0,11,61	0/1:7,3:12:17,0,108
-chr21	17504994	chr21:17504994:M	AAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,7:10:251,118,90,51,0,22	2/2:0,2,13:17:255,246,203,50,16,0	2/2:0,2,14:16:255,246,202,47,13,0
-chr21	17505810	chr21:17505810:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:27:153,0,162	0/1:15,14:31:156,0,182	0/0:33,2:36:0,62,255
-chr21	17506009	chr21:17506009:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,42:42:255,123,0	1/1:0,43:45:255,132,0
-chr21	17507648	chr21:17507648:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:31:255,86,0	1/1:0,8:10:213,27,0	0/1:1,4:5:86,0,10
-chr21	17508972	chr21:17508972:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:73,7,0	1/1:0,3:4:37,0,0	0/1:0,2:3:24,0,2
-chr21	17511372	chr21:17511372:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,27:29:255,255,255,85,49,0	1/2:0,17,14:31:255,204,152,255,0,206	1/2:1,23,19:44:255,255,226,255,0,255
-chr21	17514566	chr21:17514566:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:0,41:41:255,120,0	1/1:2,52:55:255,125,0
-chr21	17514638	chr21:17514638:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,2:37:0,64,255	0/0:29,2:31:0,56,255	0/1:23,16:42:175,0,255
-chr21	17514974	chr21:17514974:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,19:48:216,0,255	0/0:44,1:46:0,117,255	0/0:47,0:47:0,139,255
-chr21	17524029	chr21:17524029:M	TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/0:9,0:11:0,32,182	0/1:10,11:22:141,0,122
-chr21	17529035	chr21:17529035:M	TTTTTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,9,94	0/0:3,0:4:0,12,125	1/1:1,13:14:255,11,0
-chr21	17530115	chr21:17530115:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9,0:9:156,26,0,156,26,156	1/1:0,4,0:4:66,12,0,66,12,66	1/2:1,2,5:8:131,67,62,12,0,22
-chr21	17531299	chr21:17531299:M	AAAAAAAAAAAAAGAAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,88,255	0/0:22,0:23:0,57,255	0/1:7,9:19:126,0,80
-chr21	17531938	chr21:17531938:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:26:0,64,255	0/1:11,18:31:199,0,72	0/0:36,2:43:0,88,255
-chr21	17534790	chr21:17534790:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6:18:58,0,142	1/1:2,18:21:255,27,0	0/1:12,7:22:69,0,166
-chr21	17541618	chr21:17541618:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,8,3:16:189,0,104,98,43,146	2/2:1,1,23:25:255,255,255,56,55,0	0/2:15,3,16:34:223,190,255,0,213,172
-chr21	17545773	chr21:17545773:M	TTTTTTTTGTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:129,0,147	1/1:2,30:32:255,59,0	0/1:15,21:38:255,0,152
-chr21	17550352	chr21:17550352:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,2:14:9,0,255	0/1:2,11:14:246,0,12	0/1:6,4:10:76,0,132
-chr21	17553615	chr21:17553615:M	TTTTTTTTTTTTTTTTTTTCTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,10:15:138,0,37	1/1:0,9:10:165,29,0	0/1:4,7:13:95,0,51
-chr21	17558082	chr21:17558082:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,17:33:255,0,255	1/1:0,46:47:255,138,0	0/1:15,27:43:255,0,255
-chr21	17559670	chr21:17559670:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:8:101,0,10	1/1:0,7:8:188,21,0	1/1:1,8:11:200,1,0
-chr21	17559972	chr21:17559972:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:34:255,0,185	1/1:0,41:43:255,126,0	0/1:22,16:40:199,0,255
-chr21	17565283	chr21:17565283:M	ACACACACACACACACACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,27:43:255,0,255	1/1:0,37:39:255,117,0	0/1:13,22:35:255,0,255
-chr21	17566947	chr21:17566947:M	AAAAAAAAAAAAGAAAGAAAAAGAAAAAAA	<29>,<31>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,9,16:28:255,255,255,152,0,180	2/2:1,0,23:24:255,255,255,53,69,0	1/2:4,14,16:37:255,228,255,194,0,255
-chr21	17567863	chr21:17567863:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:44:244,0,255	1/1:1,27:28:255,65,0	0/1:13,18:31:236,0,145
-chr21	17568126	chr21:17568126:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:9:108,8,0	0/1:2,4:6:49,0,16	0/1:3,4:8:57,0,28
-chr21	17568558	chr21:17568558:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,16,5:24:255,42,76,240,0,255	1/1:3,29,0:35:255,48,0,255,93,255	1/2:2,17,9:28:255,125,172,255,0,255
-chr21	17569360	chr21:17569360:M	TATATATTATATATATATATGTACATATAT	<16>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,16:33:210,0,228	0/0:16,0:17:0,47,255	0/1:12,14:26:185,0,148
-chr21	17572208	chr21:17572208:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,54,0	1/1:1,9:13:230,2,0	1/1:1,21:23:255,37,0
-chr21	17574999	chr21:17574999:M	ACATACATACATACATACATACATACATACATACATACATACATACATACATA	<10.8>,<12.2>	.	.	Motif=ACAT	GT:AD:DP:PL	1/2:0,11,9:20:255,171,244,255,0,255	1/1:0,23,0:25:255,75,0,255,74,255	1/2:0,17,16:33:255,255,255,255,0,255
-chr21	17575493	chr21:17575493:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,14:24:255,0,203	1/1:0,15:16:255,48,0	0/1:19,13:34:248,0,255
-chr21	17576088	chr21:17576088:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,7:15:77,0,86	0/1:11,9:21:87,0,130	0/1:13,8:21:74,0,159
-chr21	17579885	chr21:17579885:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/0:45,1:49:0,125,255	0/1:20,30:51:255,0,216
-chr21	17581848	chr21:17581848:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:212,35,0	1/1:0,7:7:123,21,0	1/1:0,6:7:117,20,0
-chr21	17581921	chr21:17581921:M	GTTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTTGTTT	<9>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,38:38:255,113,0	1/1:0,36:36:255,107,0
-chr21	17586383	chr21:17586383:M	TATATATATATATAATGTGTATATATATATATAATATATATTATATATGTATA	<27.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:1,0:1:0,3,18	0/1:5,7:12:96,0,57
-chr21	17589583	chr21:17589583:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/0:35,1:36:0,88,255	0/1:13,25:39:255,0,138
-chr21	17590229	chr21:17590229:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:31:255,54,0	1/1:2,26:29:255,50,0	1/1:3,27:31:255,37,0
-chr21	17599476	chr21:17599476:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,155	0/0:5,0:6:0,17,95	0/1:3,5:11:68,0,34
-chr21	17608374	chr21:17608374:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:43:0,107,255	0/0:26,0:26:0,76,255	0/1:17,15:32:180,0,215
-chr21	17614103	chr21:17614103:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,39:42:255,86,0	1/1:1,37:39:255,96,0	1/1:2,40:43:255,81,0
-chr21	17616336	chr21:17616336:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7:15:83,0,81	0/1:5,8:14:99,0,47	1/1:0,11:11:193,32,0
-chr21	17625226	chr21:17625226:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,1:48:0,123,255	0/0:47,0:48:0,141,255	0/1:25,20:46:243,0,255
-chr21	17630651	chr21:17630651:M	TTTTTTTTTTTTTTTTTT	<19>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,10,5:18:197,79,84,113,0,255	1/2:3,4,4:11:91,52,76,15,0,124	1/2:2,7,4:18:151,73,86,65,0,183
-chr21	17670334	chr21:17670334:M	TCTCTCTCTCTCTCTCTCTCTC	<10>	.	.	Motif=TC	GT:AD:DP:PL	0/1:13,20:36:255,0,152	0/1:14,21:35:255,0,149	0/0:36,1:37:0,90,255
-chr21	17673720	chr21:17673720:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:163,29,0	1/1:0,8:8:129,23,0	0/0:0,0:1:0,1,3
-chr21	17680037	chr21:17680037:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:14:3,0,142	0/0:10,0:12:0,34,183	0/1:5,4:11:45,0,63
-chr21	17680619	chr21:17680619:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,5:10:103,0,81	0/1:2,4:6:88,0,32	0/0:16,0:16:0,48,255
-chr21	17683821	chr21:17683821:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,7:27:255,83,112,255,0,255	0/1:13,6,0:21:138,0,255,161,172,255	0/2:3,0,6:10:64,81,207,0,39,13
-chr21	17685280	chr21:17685280:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTTGTTT	<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:19,18:37:255,0,255	0/1:15,9:26:163,0,255	0/0:46,0:48:0,144,255
-chr21	17692266	chr21:17692266:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,17:45:188,0,255	0/1:18,14:35:152,0,246	0/0:26,2:28:0,46,255
-chr21	17693272	chr21:17693272:M	TTTTTTCTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,11:16:154,0,44	0/1:7,8:16:102,0,75	0/0:22,0:23:0,67,255
-chr21	17693618	chr21:17693618:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:36:161,0,255	0/1:22,18:40:205,0,255	0/0:34,0:34:0,100,255
-chr21	17695717	chr21:17695717:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<5.2>,<11.2>	.	.	Motif=TTAT	GT:AD:DP:PL	1/2:0,19,10:29:255,193,225,255,0,255	0/1:8,20,0:28:255,0,155,255,144,255	0/2:10,0,7:17:83,132,255,0,187,139
-chr21	17698568	chr21:17698568:M	AAAAAAAAAAAGAAAAAAAAAAAAAAA	<19>,<26>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,5,11:25:252,139,255,120,0,109	0/1:6,5,0:16:113,0,149,136,103,221	0/2:7,0,8:21:72,126,255,0,133,83
-chr21	17703520	chr21:17703520:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGT	<22>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,10:21:255,148,115,191,0,133	1/2:0,12,7:19:255,99,63,198,0,146	2/2:0,1,15:16:255,246,243,47,30,0
-chr21	17711021	chr21:17711021:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,13:20:191,0,52	0/1:15,21:36:255,0,156	0/0:27,0:27:0,79,255
-chr21	17718102	chr21:17718102:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:16:139,0,194	0/1:2,7:12:168,0,18	0/0:9,0:11:0,30,253
-chr21	17722214	chr21:17722214:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:8,4:15:41,0,100	0/1:14,4:20:10,0,201
-chr21	17722924	chr21:17722924:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,20:36:255,0,190	0/1:14,23:38:255,0,134	0/0:31,1:33:0,79,255
-chr21	17723595	chr21:17723595:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:27:139,0,177	0/1:13,15:30:172,0,157	0/0:40,1:43:0,105,255
-chr21	17731757	chr21:17731757:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<12.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:2,13:15:216,6,0	0/1:4,2:6:19,0,55	0/1:12,5:17:45,0,175
-chr21	17737310	chr21:17737310:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:38,0,15	0/1:1,1:3:21,0,8	0/1:1,0:2:7,0,11
-chr21	17744946	chr21:17744946:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:6:0,14,80	0/0:15,0:17:0,49,255	0/1:7,3:11:19,0,99
-chr21	17745481	chr21:17745481:M	TTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,6:6:174,18,0	0/0:5,0:6:0,18,147
-chr21	17755233	chr21:17755233:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,3,14:19:255,255,229,48,1,0	2/2:0,0,9:10:255,193,167,30,29,0	1/2:3,6,5:15:177,29,49,29,0,100
-chr21	17756642	chr21:17756642:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:24:255,66,0	1/1:0,13:15:255,42,0	0/1:5,16:21:255,0,71
-chr21	17764534	chr21:17764534:M	ACACACACACACACACACACTCACACACACAC	<17>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,12:32:135,0,255	1/1:1,34:35:255,85,0	0/0:30,0:30:0,89,255
-chr21	17767776	chr21:17767776:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:38:255,0,169	1/1:0,43:43:255,126,0	0/0:34,0:36:0,105,255
-chr21	17786301	chr21:17786301:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:1,4:5:41,0,0	0/1:2,4:8:46,0,8
-chr21	17788586	chr21:17788586:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,35:37:255,72,0	1/1:0,26:26:255,76,0	1/1:3,35:39:255,60,0
-chr21	17789254	chr21:17789254:M	CACACACACACACACACACACACACACACACACA	<12>,<16>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,40,0:40:255,120,0,255,120,255	1/1:0,25,0:25:255,75,0,255,75,255	1/2:0,18,7:25:255,124,131,255,0,255
-chr21	17795005	chr21:17795005:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:18:255,35,0	1/1:1,13:14:202,24,0	0/1:17,7:26:55,0,230
-chr21	17812811	chr21:17812811:M	AAAAAAACAAAAAAAAACAAACAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/0:24,0:24:0,71,255	0/1:11,12:23:153,0,135
-chr21	17821900	chr21:17821900:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:1,15:17:251,32,0	0/1:13,12:26:137,0,163
-chr21	17826778	chr21:17826778:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:28:0,45,255	0/1:8,7:18:77,0,104	0/0:16,2:18:0,17,247
-chr21	17828370	chr21:17828370:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:32:255,83,0	1/1:0,31:32:255,94,0	1/1:2,30:34:255,63,0
-chr21	17833430	chr21:17833430:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:23:0,48,255	0/1:9,4:15:43,0,113	0/0:24,0:25:0,70,255
-chr21	17854771	chr21:17854771:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,26:40:255,0,144	1/1:2,34:38:255,76,0	0/0:33,1:34:0,82,255
-chr21	17858731	chr21:17858731:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,11:34:103,0,255	0/1:3,15:20:214,0,5	0/0:40,1:45:0,110,255
-chr21	17859355	chr21:17859355:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17:39:211,0,255	1/1:0,26:29:255,84,0	0/1:17,21:38:255,0,197
-chr21	17859472	chr21:17859472:M	CTTTCTCTTTCT	<1.8>	.	.	Motif=CTTTCT	GT:AD:DP:PL	0/1:20,20:40:255,0,255	1/1:0,38:38:255,114,0	0/0:33,0:33:0,99,255
-chr21	17863072	chr21:17863072:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,7,0,7:16:255,195,183,255,189,255,108,0,116,174	3/3:0,0,0,17:19:255,255,255,255,255,255,57,57,51,0	1/2:1,11,6,0:18:255,83,48,136,0,144,255,100,193,255
-chr21	17863624	chr21:17863624:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,17,1:43:255,0,255,255,255,255	1/1:0,27,2:31:255,87,0,255,55,255	0/2:11,1,16:29:219,225,255,0,189,127
-chr21	17865546	chr21:17865546:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,16:22:255,0,98	1/1:0,21:24:255,71,0	0/1:3,13:22:255,0,51
-chr21	17879632	chr21:17879632:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,1:2:12,0,6	1/1:0,0:1:1,1,0	0/1:1,4:6:51,0,10
-chr21	17880386	chr21:17880386:M	AAAAAACAAAAAAAAAAAAAAA	<29>,<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:4:92,10,0,61,9,52	2/2:0,0,3:3:89,57,49,9,9,0	1/2:0,4,3:7:181,50,29,66,0,46
-chr21	17882185	chr21:17882185:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:21:255,61,0	1/1:1,16:19:255,38,0	1/1:0,36:37:255,109,0
-chr21	17884241	chr21:17884241:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1:41:0,101,255	0/0:31,1:32:0,76,255	0/1:18,12:31:138,0,238
-chr21	17891086	chr21:17891086:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/0:21,0:24:0,66,255	0/1:5,15:23:231,0,23
-chr21	17896552	chr21:17896552:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,2:53:0,118,255	0/0:33,2:35:0,67,255	0/1:24,18:43:207,0,255
-chr21	17902139	chr21:17902139:M	TTTTTTTTTGTTTTTTTTTTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTT	<10.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,14:14:255,41,0	1/1:1,14:15:241,26,0	1/1:0,6:9:112,13,0
-chr21	17905587	chr21:17905587:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:34:224,0,161	1/1:3,25:29:255,34,0	0/1:22,16:39:164,0,255
-chr21	17917877	chr21:17917877:M	GTGTGTGTGTGTGTATGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/0:38,0:38:0,114,255	0/1:9,15:26:255,0,183	0/1:17,12:29:243,0,255
-chr21	17923463	chr21:17923463:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,63,255	0/1:5,5:11:99,0,103	0/1:8,1:10:0,0,187
-chr21	17926377	chr21:17926377:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:27:116,0,165	1/1:0,21:26:255,75,0	0/1:10,10:20:114,0,114
-chr21	17927209	chr21:17927209:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,11:35:54,0,194	0/1:11,9:25:94,0,69	0/0:23,3:26:0,35,252
-chr21	17929817	chr21:17929817:M	GGAGGGAGTGGGGAGGGAG	<2>	.	.	Motif=GGAG	GT:AD:DP:PL	0/0:38,2:40:0,65,255	0/1:13,22:35:255,0,254	0/1:16,17:33:255,0,255
-chr21	17934227	chr21:17934227:M	ATAAAAATAAAAAAAAAA	<2.8>	.	.	Motif=ATAAAA	GT:AD:DP:PL	0/0:23,2:25:0,33,255	0/1:13,21:34:255,0,165	0/1:13,18:31:255,0,173
-chr21	17934431	chr21:17934431:M	CTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:21,13:34:255,0,255	0/1:21,26:48:255,0,255
-chr21	17936465	chr21:17936465:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:37:0,90,255	0/1:16,15:35:160,0,217	0/1:18,20:41:240,0,233
-chr21	17938384	chr21:17938384:M	ATATATATAGATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:19,13:32:141,0,249	0/0:32,0:32:0,95,255
-chr21	17941287	chr21:17941287:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,7:14:93,0,49	0/1:4,4:9:43,0,43	1/1:0,7:10:131,24,0
-chr21	17945210	chr21:17945210:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,1,7:17:177,113,238,0,130,132	0/1:13,7,0:22:131,0,255,121,255,255	1/2:0,3,10:14:255,183,147,53,0,13
-chr21	17947533	chr21:17947533:M	ACACACACACAGACACACACACACACACACACACA	<16.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,26,0:42:255,0,182,255,255,255	0/2:16,1,16:33:191,255,255,0,224,203	1/1:0,34,0:35:255,103,0,255,105,255
-chr21	17948311	chr21:17948311:M	AAAAAAGAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:35:200,0,255	0/0:41,0:41:0,121,255	1/1:0,46:46:255,136,0
-chr21	17950493	chr21:17950493:M	ACACAACACACACACACACACACACACACACACACACACACAC	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:8,6:15:72,0,99	0/0:8,1:11:0,10,120	1/1:0,13:14:235,41,0
-chr21	17951108	chr21:17951108:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<14>,<15>,<19>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,23,16,0:40:255,255,255,253,255,183,255,255,0,255,255,255,255,255,255	3/4:0,1,1,17,9:29:255,255,255,255,255,255,255,255,255,255,255,255,255,0,255	1/2:0,29,13,0,0:43:255,238,110,255,0,255,255,201,255,255,255,239,255,255,255
-chr21	17952195	chr21:17952195:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,17	0/1:2,3:8:50,0,12	.
-chr21	17956280	chr21:17956280:M	CTCTCTCTCTC	<3.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:14,20:34:255,0,255	0/0:15,0:15:0,45,255	1/1:0,42:42:255,126,0
-chr21	17963064	chr21:17963064:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:13:157,31,0	0/0:0,0:1:0,0,0	1/1:0,10:10:144,29,0
-chr21	17963074	chr21:17963074:M	AATAATAATAATAATAATAATAA	<6.3>,<6.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/2:1,13,13:30:255,93,33,113,0,42	2/2:0,0,28:28:255,255,199,80,63,0	1/1:0,28,0:35:255,104,0,255,78,248
-chr21	17965912	chr21:17965912:M	TTTTTTTTTTTTTTTT	<17>,<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,15,8:26:255,255,255,165,162,93,255,255,0,208	1/3:0,9,0,7:16:255,213,186,255,119,255,153,0,250,238	2/2:0,2,19,2:27:255,255,255,55,10,0,255,255,38,255
-chr21	17966892	chr21:17966892:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,14:27:182,0,154	0/1:18,11:33:116,0,239	0/0:35,0:36:0,105,255
-chr21	17973395	chr21:17973395:M	TTTTCTTTTCTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<7.4>,<7.6>,<8>	.	.	Motif=TTTTC	GT:AD:DP:PL	3/3:0,0,0,4:4:73,83,113,83,112,111,12,12,12,0	0/1:3,4,2,1:10:88,0,70,41,29,77,88,41,69,146	0/2:4,1,10,0:15:149,135,231,0,53,29,186,232,62,255
-chr21	17976271	chr21:17976271:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:5:115,15,0	.
-chr21	17977365	chr21:17977365:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:10:17,0,101	0/0:14,0:18:0,52,255	1/1:1,9:10:144,11,0
-chr21	17978717	chr21:17978717:M	AAAAAAGAAAAAAAAAGAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:19:93,0,69	0/1:9,10:20:91,0,76	1/1:1,13:15:178,25,0
-chr21	17988403	chr21:17988403:M	TTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:16,13:31:154,0,229	0/1:15,6:25:36,0,228	1/1:1,18:19:255,38,0
-chr21	17991659	chr21:17991659:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,13,0:20:255,0,95,236,95,255	1/2:0,10,8:21:255,114,76,194,0,142	0/0:10,0,2:13:0,30,255,0,174,141
-chr21	17992719	chr21:17992719:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,4:6:120,0,8	1/1:0,4:6:151,18,0	0/0:0,0:2:0,2,3
-chr21	18001774	chr21:18001774:M	TTTTTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3:7:32,52,174,0,61,43	0/1:2,7,2:14:216,0,44,194,0,216	0/2:4,0,1:6:3,17,135,0,67,53
-chr21	18003122	chr21:18003122:M	AAAAAAAAAAAAAACAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:14:165,0,126	0/1:6,8:17:170,0,143	0/0:16,0:18:0,53,255
-chr21	18003387	chr21:18003387:M	TTATTTTATTTTATT	<2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:15,28:43:255,0,163	0/1:13,9:22:99,0,172	0/0:27,0:27:0,80,255
-chr21	18008313	chr21:18008313:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,20:36:255,0,197	1/1:0,46:47:255,138,0	0/0:39,1:41:0,102,255
-chr21	18028209	chr21:18028209:M	CCTCCCCTCCCCTCCCCTCCCCTCCCCTTCCCCTTCCCCT	<7>,<8.2>	.	.	Motif=CCTCC	GT:AD:DP:PL	1/2:0,4,3:8:51,13,30,49,0,53	1/2:0,6,2:9:67,7,8,72,0,86	0/0:8,2,1:11:0,5,94,14,34,40
-chr21	18028246	chr21:18028246:M	CCTTTTCCTTTTCTTTTTCTTTTTCCTTTTCC	<2.3>,<6>	.	.	Motif=CCTTTT	GT:AD:DP:PL	1/2:0,1,6:18:179,148,171,52,0,48	1/2:0,3,4:8:160,96,102,73,0,62	0/2:6,0,4:11:69,95,255,0,136,115
-chr21	18028278	chr21:18028278:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<12.2>,<13.2>	.	.	Motif=CCTT	GT:AD:DP:PL	1/2:0,5,6:11:242,73,43,63,0,31	1/1:0,1,0:3:29,3,0,15,3,12	0/2:0,0,11:14:193,128,147,0,42,10
-chr21	18050927	chr21:18050927:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:43:0,126,255	0/0:31,3:37:0,55,255	0/1:24,18:44:214,0,255
-chr21	18056477	chr21:18056477:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/0:23,0:23:0,67,255	0/1:15,13:28:151,0,187
-chr21	18059494	chr21:18059494:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:39:255,96,0	1/1:1,34:37:255,91,0	0/1:17,11:29:113,0,231
-chr21	18084921	chr21:18084921:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/0:15,0:17:0,49,255	0/1:10,11:23:133,0,116
-chr21	18090727	chr21:18090727:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:9:0,5,103	0/1:3,5:10:61,0,37	0/1:9,11:23:162,0,95
-chr21	18108148	chr21:18108148:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:25:0,42,255	0/0:22,0:29:0,80,255	0/1:18,27:46:255,0,255
-chr21	18108838	chr21:18108838:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,14:25:255,250,180,178,0,110	1/2:0,15,10:25:255,171,98,255,0,184	0/1:16,16,0:33:255,0,255,255,255,255
-chr21	18117692	chr21:18117692:M	AATAAATAAATAAGATAAAATAAATAAATAAATAAGAAGAAATAAATAAATAAA	<12.5>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:7,10:20:81,0,41	0/1:3,5:11:40,0,15	0/0:16,0:18:0,44,201
-chr21	18122549	chr21:18122549:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:2,42:44:255,94,0	0/1:23,15:38:166,0,255
-chr21	18126596	chr21:18126596:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,21:40:255,0,226	0/1:23,14:38:145,0,255	0/1:17,23:40:255,0,190
-chr21	18129270	chr21:18129270:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:45:255,132,0	1/1:0,39:40:255,117,0	0/1:28,20:49:245,0,255
-chr21	18129873	chr21:18129873:M	TCTCTCTCTCTGTCTTTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:11,14:34:255,0,255	0/1:18,14:37:255,0,255	0/1:9,13:27:255,0,192
-chr21	18129893	chr21:18129893:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGT	<19.5>,<20.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,17,12,0:30:255,210,122,255,0,221,255,210,255,255	1/2:0,17,9,0:27:255,151,74,255,0,208,255,151,255,255	1/3:1,9,0,9:20:255,136,232,255,255,255,245,0,163,233
-chr21	18136106	chr21:18136106:M	AAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:87,9,0	1/1:0,2:4:71,9,0	0/1:0,2:5:59,0,1
-chr21	18136720	chr21:18136720:M	ATATATATATATATATATATATATATATATATATGTATA	<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,17:18:255,36,0	1/1:0,0:2:16,4,0	1/1:0,5:6:68,4,0
-chr21	18145436	chr21:18145436:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:84,14,5,48,0,38	0/2:1,0,3:4:36,39,61,0,15,4	.
-chr21	18148885	chr21:18148885:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:33:255,94,0	1/1:3,45:49:255,91,0	1/1:0,30:35:255,98,0
-chr21	18151083	chr21:18151083:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,12:12:255,36,0	1/1:0,17:19:255,56,0
-chr21	18151989	chr21:18151989:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:19:255,57,0	1/1:0,22:25:255,69,0	1/1:0,17:18:255,54,0
-chr21	18158072	chr21:18158072:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,21:32:255,0,59	1/1:2,19:23:255,33,0	1/1:3,34:38:255,59,0
-chr21	18158839	chr21:18158839:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:10:143,28,0	1/1:1,6:8:85,8,0	1/1:1,5:8:72,5,0
-chr21	18158854	chr21:18158854:M	AAGAAGAAGAAAAGAA	<3.7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,1:1:20,3,0	1/1:0,1:1:20,3,0	1/1:0,3:3:61,9,0
-chr21	18162412	chr21:18162412:M	TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTTTCTCTCTCTCTCTCT	<22.5>,<25.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,19:19:255,255,255,57,57,0	1/2:1,8,11:20:255,255,255,113,0,185	1/2:0,10,2:13:183,49,29,162,0,250
-chr21	18167202	chr21:18167202:M	TCTCTCTCTCT	<3.5>,<7.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,16:17:255,255,255,48,51,0	2/2:0,0,17:20:255,255,255,51,60,0	1/1:0,3,0:4:76,9,0,84,12,105
-chr21	18167212	chr21:18167212:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,13:24:255,0,73	0/1:8,12:21:255,0,167	0/0:9,0:13:0,39,255
-chr21	18171115	chr21:18171115:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,24,18:44:255,255,215,255,0,255	1/2:2,15,14:32:255,220,169,192,0,197	1/1:1,51,1:53:255,138,0,255,137,255
-chr21	18171163	chr21:18171163:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:21:255,62,0	1/1:0,12:12:223,35,0	1/1:0,26:26:255,77,0
-chr21	18171737	chr21:18171737:M	TTTTTTTTTTTTTCTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,17:34:255,255,233,255,0,194	1/2:0,21,16:38:255,241,175,255,0,255	2/2:1,1,35:37:255,255,255,90,90,0
-chr21	18174099	chr21:18174099:M	ATATATATATATATATATCTTGGTGTATATATATATATATATATATATATATATATATATATA	<21.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,5:5:138,15,0	1/1:0,5:5:137,15,0	0/0:0,0:1:0,0,0
-chr21	18189630	chr21:18189630:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:53,9,0	0/1:3,3:6:33,0,33	0/1:1,2:5:43,0,3
-chr21	18194604	chr21:18194604:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:145,0,182	0/1:16,11:28:111,0,210	0/1:19,18:39:231,0,229
-chr21	18195029	chr21:18195029:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<9.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:5,6:11:78,0,58	0/1:11,12:23:161,0,139
-chr21	18201801	chr21:18201801:M	TTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:8:0,24,202	0/0:8,0:8:0,24,220	0/1:5,3:10:59,0,116
-chr21	18205738	chr21:18205738:M	TTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:22:255,65,0,255,66,255	0/1:11,12,1:25:138,0,132,180,165,255	1/2:1,9,6:20:255,137,136,152,0,239
-chr21	18206864	chr21:18206864:M	ATTATTATTATTATTATTATTATTATTATTATTTTATTAT	<11.3>,<12.3>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,29,0:29:255,87,0,255,86,255	0/1:3,11,0:14:255,0,45,196,53,213	1/2:0,12,5:17:255,80,44,223,0,177
-chr21	18207660	chr21:18207660:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:103,18,0	1/1:0,6:7:109,20,0	1/1:0,1:4:17,3,0
-chr21	18208172	chr21:18208172:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:38:0,97,255	0/1:21,0:29:22,0,255	0/1:13,11:30:243,0,255
-chr21	18211142	chr21:18211142:M	ACACACACACACACACACACACACACACTCACACTCACAC	<18>,<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,18,1:20:255,255,255,57,60,0,255,255,40,255	2/3:0,0,13,8:22:255,255,255,137,140,76,226,238,0,176	1/2:0,14,8,0:22:255,218,180,255,0,255,255,143,255,255
-chr21	18215200	chr21:18215200:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:41:0,120,255	0/0:38,1:39:0,97,255	0/1:25,17:43:176,0,255
-chr21	18219779	chr21:18219779:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:57,0:58:0,171,255	0/0:44,0:44:0,129,255	0/1:25,23:51:255,0,255
-chr21	18232943	chr21:18232943:M	ATATATATATATATATATATATATATATATGTATATATAT	<21>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,5:15:44,0,125	0/0:3,0:4:0,12,62	1/1:0,2:3:34,6,0
-chr21	18241250	chr21:18241250:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0,0:25:0,73,255,75,255,255	0/2:13,1,13:31:255,255,255,0,213,255	0/1:22,21,0:44:255,0,255,255,255,255
-chr21	18243548	chr21:18243548:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:39:0,105,255	0/1:19,14:33:148,0,235	0/0:20,1:23:0,46,255
-chr21	18251520	chr21:18251520:M	TATTTATTTTATTTATTATTT	<3.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,3:3:83,9,0	.	1/1:0,1:1:27,3,0
-chr21	18254135	chr21:18254135:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,0:46:0,135,255	0/1:23,26:51:255,0,255	0/0:52,1:53:0,138,255
-chr21	18254719	chr21:18254719:M	TCTATCTATCTATCTA	<3>	.	.	Motif=TCTA	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/1:19,29:48:255,0,204	0/0:42,0:42:0,124,255
-chr21	18260821	chr21:18260821:M	AACAACAACAACAACAACAACAACAACAAAAAAACACCACCAACAACAACAA	<15.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:11,7:18:134,0,244	0/0:22,0:22:0,66,255
-chr21	18261361	chr21:18261361:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1:21:0,41,255	0/0:17,2:21:0,26,255	0/1:17,10:29:114,0,219
-chr21	18263902	chr21:18263902:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2,0:40:0,81,255,114,255,255	0/1:23,13,0:38:111,0,255,186,255,255	0/2:14,2,11:32:232,166,255,0,244,255
-chr21	18264602	chr21:18264602:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:2,4,123,0,46,40	1/2:0,3,2:6:111,27,41,89,0,84	0/2:4,0,3:7:21,42,185,0,55,35
-chr21	18264624	chr21:18264624:M	AGAGAGAGAGA	<7.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:16,8:27:97,0,255	0/1:12,5:17:62,0,222
-chr21	18265311	chr21:18265311:M	ATATATATATAT	<5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:34:0,78,255	0/0:24,0:41:0,102,255	0/1:31,19:63:66,0,255
-chr21	18268938	chr21:18268938:M	CTCTCTCTCTCT	<4>	.	.	Motif=CT	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/1:23,24:47:255,0,255	0/1:19,32:51:255,0,255
-chr21	18271586	chr21:18271586:M	TTTTCTTTTCTTTTCTTTTTTTT	<5.6>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:17,18:35:243,0,224	0/1:21,21:42:255,0,255	0/0:47,0:47:0,139,255
-chr21	18276756	chr21:18276756:M	TTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0,0:6:0,18,170,18,170,170	0/2:4,0,7:14:217,200,255,0,105,81	1/1:0,11,0:13:255,39,0,255,39,255
-chr21	18280594	chr21:18280594:M	AACAACAAAACAACAA	<4.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:24,0:27:0,51,255	0/1:7,7:15:71,0,62	0/0:18,0:19:0,49,255
-chr21	18281026	chr21:18281026:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,3:50:0,91,255	0/1:27,23:52:255,0,255	0/0:44,0:44:0,130,255
-chr21	18285001	chr21:18285001:M	AAAAAAAAAAAAGAGAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:24:255,70,0	1/1:0,29:30:255,88,0	1/1:0,21:22:255,64,0
-chr21	18288529	chr21:18288529:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,3:5:95,52,75,53,0,45	1/1:0,3,0:5:109,15,0,111,15,114	2/2:0,0,2:2:34,40,58,6,6,0
-chr21	18300357	chr21:18300357:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:1,23:24:255,53,0	1/1:1,32:34:255,82,0
-chr21	18308377	chr21:18308377:M	ACACACACACACACACACACACACACACA	<17.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:14,1,8:23:171,184,255,0,255,255	0/0:20,0,0:20:0,60,255,60,255,255	1/2:0,15,10:25:255,255,214,255,0,255
-chr21	18308599	chr21:18308599:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,15:34:255,239,182,255,0,250	2/2:2,2,25:29:255,255,255,49,49,0	1/1:0,36,1:40:255,116,0,255,99,255
-chr21	18310934	chr21:18310934:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14,0:15:255,16,0,255,41,252	1/1:0,23,1:29:255,83,0,255,65,255	0/2:2,0,15:19:255,255,255,0,63,16
-chr21	18313336	chr21:18313336:M	TCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:20,15:39:207,0,255	1/1:0,27:31:255,80,0	0/1:27,19:49:255,0,255
-chr21	18313350	chr21:18313350:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,16:40:255,0,255	1/1:0,24:24:255,72,0	0/0:24,0:24:0,72,255
-chr21	18313894	chr21:18313894:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,0,14:27:190,244,255,0,186,114	0/0:23,0,1:25:0,74,255,56,255,255	1/2:0,12,17:34:255,255,255,255,0,255
-chr21	18315495	chr21:18315495:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,6:18:43,0,139	0/0:6,0:6:0,17,92	0/1:14,5:19:23,0,164
-chr21	18316025	chr21:18316025:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,26:26:255,76,0	1/1:0,16:16:255,47,0	1/1:0,30:33:255,96,0
-chr21	18319423	chr21:18319423:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:81,0,54	0/0:5,0:7:0,9,83	0/1:3,2:5:20,0,37
-chr21	18321350	chr21:18321350:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:52,2,0	0/1:2,2:7:41,0,15	0/1:1,3:5:50,0,3
-chr21	18331073	chr21:18331073:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,6:7:155,0,7	0/0:4,0:5:0,13,115	1/1:0,2:3:55,6,0
-chr21	18335940	chr21:18335940:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:27:255,70,0	1/1:1,31:32:255,76,0	1/1:1,30:32:255,76,0
-chr21	18338695	chr21:18338695:M	AGAGAGAGAGACAGAGACAGACAGAGAGAGAGATAAAGAGAGAGAAAGAGAGAGAGAG	<31>	.	.	Motif=AG	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/1:3,7:10:161,0,51	0/0:16,0:16:0,48,255
-chr21	18365744	chr21:18365744:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,69,255	0/1:9,3:14:11,0,116	0/1:3,3:7:44,0,29
-chr21	18369975	chr21:18369975:M	AAAAAAAAAAAAAAGAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,5:11:161,64,61,35,0,53	1/2:1,4,6:12:208,94,80,41,0,44	2/2:0,0,8:9:236,174,152,27,26,0
-chr21	18372099	chr21:18372099:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,6,0:17:55,0,142,104,190,255	1/2:1,7,10:20:255,242,224,103,0,154	0/1:4,7,0:11:87,0,36,118,68,255
-chr21	18376201	chr21:18376201:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:2,26:29:255,50,0	1/1:2,35:43:255,87,0
-chr21	18380168	chr21:18380168:M	CACACACACACACACACACACACACACACACACACACAC	<20.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,10,0:21:114,0,119,147,173,255	1/1:2,15,0:17:218,16,0,224,49,255	0/2:8,2,13:24:255,190,255,0,114,172
-chr21	18387597	chr21:18387597:M	ACACACACACACACATACACACACACACACACACACACACACACACACACACACGCACACACAC	<27>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,45,0	1/1:0,10:13:255,15,0	0/1:6,6:12:128,0,139
-chr21	18396809	chr21:18396809:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<12.8>,<14.8>,<33.8>	.	.	Motif=TCTA	GT:AD:DP:PL	1/2:0,9,4,5:18:255,98,67,210,0,198,255,47,168,255	2/3:0,0,3,7:12:150,145,142,71,71,60,79,74,0,60	1/2:1,7,4,0:12:238,72,71,138,0,153,249,97,173,255
-chr21	18402528	chr21:18402528:M	AAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,2:8:179,32,12,86,0,75	0/2:1,1,6:8:170,83,88,0,9,6	0/0:8,0,0:10:0,24,230,30,240,255
-chr21	18407426	chr21:18407426:M	TTTCTTTTTCTTTTTTTCTTTTCTTTTTTTTTTTTTTT	<5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:4,22:26:255,0,30	0/1:1,14:17:255,0,2	0/0:8,0:10:0,27,235
-chr21	18410117	chr21:18410117:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,18:30:246,0,118	0/0:19,0:21:0,61,255	0/1:11,8:19:89,0,143
-chr21	18410599	chr21:18410599:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:39:230,0,255	0/0:42,1:43:0,108,255	0/1:33,21:57:226,0,255
-chr21	18411340	chr21:18411340:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,21:36:255,0,154	0/1:19,20:39:237,0,219	0/0:38,0:38:0,112,255
-chr21	18413187	chr21:18413187:M	CCTTCCTGCCTTCCCTCCCTCCCTCCCTTCCTCTTCCTTCCTTCCTTTTCTCTCTCTTTCTTCCTTCCTT	<12>	.	.	Motif=CCTT	GT:AD:DP:PL	0/1:3,1:5:13,0,68	0/1:5,3:8:49,0,107	0/1:2,0:5:12,0,42
-chr21	18413585	chr21:18413585:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:21:236,0,204	0/1:11,6:19:118,0,240	0/0:12,0:13:0,36,255
-chr21	18419221	chr21:18419221:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:105,0,14	0/1:1,1:4:34,0,19	0/1:2,2:5:44,0,54
-chr21	18423410	chr21:18423410:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:12:65,0,65	0/0:14,1:15:0,26,223	0/1:2,7:10:104,0,7
-chr21	18440373	chr21:18440373:M	AAAAAAAAAAAAAAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:196,24,0	1/1:0,8:9:225,27,0	1/1:0,2:2:54,6,0
-chr21	18441282	chr21:18441282:M	AAACAAAACAAAACAAAACAAAACAAAACCAAAAAAACAAA	<11.2>	.	.	Motif=AAACA	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:10,7:17:141,0,221	0/0:30,0:30:0,90,255
-chr21	18441607	chr21:18441607:M	AAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,9:13:229,0,49	1/1:0,12:15:255,38,0	1/1:1,19:20:255,31,0
-chr21	18441662	chr21:18441662:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<11>,<12>,<13>,<16>	.	.	Motif=ATT	GT:AD:DP:PL	3/4:0,0,0,8,13:21:255,255,255,255,255,255,247,255,255,255,228,228,152,0,192	2/3:0,0,8,5,0:14:255,255,255,90,100,62,141,121,0,103,255,255,100,144,255	1/4:0,23,0,0,9:32:255,167,192,255,255,255,255,255,255,255,255,0,255,255,255
-chr21	18445207	chr21:18445207:M	TTTTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,17,10:31:255,147,220,255,0,255	0/2:7,0,12:21:172,208,255,0,117,62	1/2:0,15,10:28:255,182,206,255,0,255
-chr21	18447440	chr21:18447440:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:5:18,0,28	0/1:2,4:6:45,0,14	0/1:1,1:2:10,0,10
-chr21	18449859	chr21:18449859:M	ACACACACACACACACACGCACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,26:28:255,81,0	1/1:0,22:26:255,73,0	1/1:0,27:30:255,82,0
-chr21	18471477	chr21:18471477:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,26:45:255,0,225	0/1:14,23:38:255,0,148	0/1:27,23:50:255,0,255
-chr21	18472456	chr21:18472456:M	TATATATATATATATATATATATATA	<10>,<11>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,11,3,2:16:255,54,32,192,0,153,255,10,161,255	1/2:0,10,7,0:17:255,120,71,171,0,122,255,101,170,255	1/3:1,17,0,9:27:255,140,198,255,165,255,255,0,255,255
-chr21	18494091	chr21:18494091:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,18,1:29:255,0,100,255,165,255	1/2:2,12,9:23:255,124,92,143,0,165	0/1:16,9,0:25:90,0,215,138,255,255
-chr21	18494530	chr21:18494530:M	AAAAAACAAAACAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:18,12:30:125,0,229	0/0:38,0:38:0,112,255
-chr21	18496963	chr21:18496963:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,15:38:202,0,255	1/1:3,34:38:255,59,0	0/1:22,30:54:255,0,255
-chr21	18504705	chr21:18504705:M	TATATATATATATATATATATATATATATATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:5,0:6:0,17,153	.	1/1:0,4:4:135,12,0
-chr21	18506583	chr21:18506583:M	TTTTTTTTTTTCTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,19:32:255,0,255	1/1:0,32:32:255,96,0	0/1:24,20:45:255,0,255
-chr21	18506891	chr21:18506891:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:37:154,0,255	1/1:1,26:29:255,67,0	0/1:21,14:39:177,0,255
-chr21	18506936	chr21:18506936:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14,3:30:255,0,255,207,185,255	1/2:0,19,11:30:255,160,103,255,0,241	0/1:13,9,1:24:217,0,255,143,228,255
-chr21	18512845	chr21:18512845:M	CAAACAACAACAACAACAACAACAACAACAACAAAAAAAAAACAAAAACAAA	<6.2>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:10,16:26:255,0,175	1/1:0,36:36:255,108,0	0/1:6,14:20:255,0,91
-chr21	18513853	chr21:18513853:M	ATAAATAAATAAATAAATAAATAAATAA	<6>	.	.	Motif=ATAA	GT:AD:DP:PL	0/1:13,17:30:244,0,163	0/1:12,9:21:104,0,156	0/1:12,18:30:251,0,138
-chr21	18516435	chr21:18516435:M	ACACACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,19:39:247,0,255	0/1:20,21:42:255,0,236	0/1:24,18:43:210,0,255
-chr21	18519127	chr21:18519127:M	AAACAAACAAACAAACAAA	<3.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:8,15:23:225,0,87	0/1:18,11:29:116,0,242	0/1:23,11:34:109,0,255
-chr21	18519164	chr21:18519164:M	AACAACAACAACAACAACAACAA	<6.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:15,13:28:145,0,177	0/1:18,12:30:113,0,210	0/1:17,16:33:178,0,191
-chr21	18527500	chr21:18527500:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:24:132,0,151	1/1:1,18:20:255,41,0	0/1:12,12:25:149,0,143
-chr21	18528541	chr21:18528541:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:11,0,10:23:243,255,255,0,255,255	1/2:0,10,6:19:255,160,122,255,0,255	0/2:14,0,10:28:255,255,255,0,255,255
-chr21	18543627	chr21:18543627:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:32:255,94,0	1/1:3,30:33:255,44,0	1/1:4,41:45:255,60,0
-chr21	18548101	chr21:18548101:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:34:245,0,171	0/1:17,13:32:157,0,199	0/1:7,20:30:255,0,47
-chr21	18555872	chr21:18555872:M	ATATATATATATATA	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,22:40:255,0,194	1/1:0,30:31:255,88,0	0/1:23,26:50:255,0,255
-chr21	18570664	chr21:18570664:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:38:255,0,173	0/0:41,0:43:0,126,255	1/1:2,37:41:255,84,0
-chr21	18588171	chr21:18588171:M	AAAAAAAAAAAAAAAAAAAAGAAAGAAAGGAAAAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:43,0,33	0/1:3,1:5:4,0,40	0/1:1,3:7:54,0,8
-chr21	18597484	chr21:18597484:M	AAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,16:30:255,255,255,196,0,255	1/1:2,35,0:37:255,74,0,255,111,255	2/2:1,0,33:42:255,255,255,94,98,0
-chr21	18613195	chr21:18613195:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:11,0,13,0:25:158,181,255,0,181,122,226,255,161,255	2/3:2,2,11,5:20:202,174,255,54,109,94,170,154,0,255	0/1:5,12,1,0:20:255,0,88,209,69,242,255,87,255,255
-chr21	18625585	chr21:18625585:M	TTTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:22,0,13:35:255,211,255,0,255,255	0/0:41,0,0:42:0,126,255,123,255,255	1/2:0,12,12:26:255,193,119,214,0,142
-chr21	18630038	chr21:18630038:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,11:34:100,0,255	0/0:25,2:29:0,50,255	1/1:1,15:18:255,34,0
-chr21	18632516	chr21:18632516:M	GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,15:29:255,244,201,255,0,182	1/1:0,31,0:33:255,99,0,255,97,255	2/2:0,1,39:40:255,255,255,118,99,0
-chr21	18635482	chr21:18635482:M	ACACATACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<19.5>,<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/4:0,5,0,0,8:14:255,142,206,255,224,255,255,219,255,255,150,0,148,151,127	3/4:1,0,0,4,3:9:90,113,218,113,218,218,36,83,83,63,62,120,120,0,106	1/2:0,17,15,0,0:33:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
-chr21	18638775	chr21:18638775:M	CACACACACCATACACACACACACACAC	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,20:41:255,0,230	0/0:32,0:32:0,94,255	0/1:17,25:43:255,0,180
-chr21	18648171	chr21:18648171:M	CTATCTATCTAGCTATCATATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATC	<19.2>,<20.2>	.	.	Motif=CTAT	GT:AD:DP:PL	0/2:2,0,1:3:18,18,48,0,37,49	0/1:9,3,0:12:19,0,127,46,159,255	1/2:0,6,3:9:171,55,29,94,0,85
-chr21	18648690	chr21:18648690:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,42:42:255,124,0	1/1:0,40:40:255,118,0
-chr21	18658665	chr21:18658665:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,2:35:0,66,255	0/1:14,14:30:162,0,164	0/0:17,2:22:0,28,255
-chr21	18661751	chr21:18661751:M	TTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:23,14:37:255,0,255	0/0:41,0:41:0,123,255	0/1:16,16:32:255,0,255
-chr21	18668457	chr21:18668457:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,21:28:255,0,111	0/0:37,0:40:0,114,255	0/1:21,15:38:255,0,255
-chr21	18669773	chr21:18669773:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTATT	<9.7>,<15.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,13,4:17:255,76,76,255,0,255	2/2:0,0,10:10:181,210,255,29,30,0	0/1:0,13,0:17:255,0,0,255,37,255
-chr21	18674538	chr21:18674538:M	ATATATATATGTGTATATATATACATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,6:16:85,0,195	0/0:11,0:11:0,33,255	0/0:15,2:17:0,5,255
-chr21	18682771	chr21:18682771:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:124,0,162	0/0:22,0:22:0,65,255	0/1:12,18:30:242,0,133
-chr21	18683495	chr21:18683495:M	TGTGTGTATGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,18:31:253,0,137	0/0:31,0:34:0,99,255	0/1:12,20:32:255,0,129
-chr21	18684544	chr21:18684544:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:14:37,0,45	0/0:7,0:10:0,10,69	0/0:9,0:9:0,25,105
-chr21	18692109	chr21:18692109:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:88,10,0	.	1/1:0,1:3:43,6,0
-chr21	18695530	chr21:18695530:M	CACACACACACACACACACACACACACACACA	<21>,<23>,<24>,<25>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,7,8,0:15:255,255,255,138,138,95,122,121,0,78,255,255,116,121,255	1/2:0,12,3,0,0:17:255,86,42,255,0,255,255,55,255,255,255,84,255,255,255	3/4:0,0,0,7,3:10:255,255,255,203,203,180,52,52,51,22,119,119,99,0,90
-chr21	18697021	chr21:18697021:M	TATATACATATATATAT	<10.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,43,0:43:255,129,0,255,129,255	1/2:0,19,7:27:255,197,140,255,0,255	1/1:0,36,0:36:255,108,0,255,108,255
-chr21	18705814	chr21:18705814:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:1,46:47:255,120,0	1/1:1,63:64:255,170,0
-chr21	18706968	chr21:18706968:M	TCCCTCTCCCTCTCCTTCTCC	<1.5>	.	.	Motif=TCCCTC	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:8,7:15:136,0,159	0/0:12,0:12:0,36,255
-chr21	18706982	chr21:18706982:M	CTTCTCCTTTTTCTTCTTCT	<2.3>,<7.3>	.	.	Motif=CTT	GT:AD:DP:PL	2/2:1,0,15:19:111,166,255,17,54,0	1/2:4,9,7:24:255,28,195,232,0,242	2/2:1,0,11:17:75,107,255,8,30,0
-chr21	18716677	chr21:18716677:M	GAAGGAAGGAAGGAAGGAAG	<6.2>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,32:36:255,87,0	1/1:0,32:34:255,92,0	1/1:0,47:48:255,139,0
-chr21	18727579	chr21:18727579:M	AAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,19,0:46:229,0,255,255,255,255	1/2:1,11,13:26:255,255,255,183,0,255	0/0:47,0,0:49:0,144,255,147,255,255
-chr21	18736210	chr21:18736210:M	AAAAAAAACAAAAAACAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,59,0	0/1:18,14:33:155,0,237	1/1:0,25:25:255,74,0
-chr21	18741702	chr21:18741702:M	ACACACACACACACACACACACACACACGCACACACACACAC	<23>,<29>,<30>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,11,6:17:255,255,255,108,108,58,197,197,0,148	1/3:1,8,0,6:15:255,140,142,255,101,255,191,0,225,207	2/2:0,0,4,0:4:125,125,125,12,12,0,82,82,12,70
-chr21	18758953	chr21:18758953:M	TTTTTTTTTTTTCTTTACTTTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:190,23,0	0/1:2,4:7:95,0,31	1/1:1,11:12:255,11,0
-chr21	18766361	chr21:18766361:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:43:255,125,0	0/1:17,13:33:255,0,255	1/1:0,62:67:255,192,0
-chr21	18784936	chr21:18784936:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,27:52:255,0,255	1/1:0,59:59:255,174,0	0/1:24,28:52:255,0,255
-chr21	18790419	chr21:18790419:M	ACACACACACACACACACACACACACACACACA	<11.5>,<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,14,0:33:255,0,255,255,255,255	0/1:7,21,0:29:255,0,133,255,195,255	0/2:11,0,14:26:255,255,255,0,255,247
-chr21	18791797	chr21:18791797:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:20:30,0,210	0/1:9,8:18:84,0,110	0/1:11,11:22:128,0,128
-chr21	18796472	chr21:18796472:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:13:78,0,69	1/1:2,8:13:122,1,0	0/1:4,4:9:53,0,44
-chr21	18796761	chr21:18796761:M	CACACACACACACACACACACACATACACACACACACACACAGACACA	<25>	.	.	Motif=CA	GT:AD:DP:PL	1/1:3,28:32:255,39,0	0/1:5,2:8:12,0,73	1/1:1,19:20:255,41,0
-chr21	18800869	chr21:18800869:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,6:10:89,114,210,0,45,24	1/2:1,3,1:5:39,2,17,36,0,73	0/0:2,0,0:2:0,6,35,6,35,35
-chr21	18802832	chr21:18802832:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,21:35:255,0,140	1/1:1,35:38:255,80,0	0/1:24,23:47:255,0,255
-chr21	18807399	chr21:18807399:M	CACACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,8:21:95,0,177	0/1:9,11:20:142,0,103	0/1:16,13:29:161,0,212
-chr21	18816512	chr21:18816512:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,15:25:210,0,92	1/1:2,27:31:255,56,0	0/1:13,19:37:255,0,138
-chr21	18820528	chr21:18820528:M	TTTTCTTTTTTTTTCTTTTTTTTTTTTT	<30>,<31>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10,0:27:198,0,255,177,255,255	1/2:0,8,4:14:255,63,28,136,0,121	0/1:6,11,1:18:255,0,116,173,136,255
-chr21	18827960	chr21:18827960:M	TTTTATTTTATTTTATTTATATTTTATTTTATTTATATTTT	<7.8>,<9.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/2:0,12,9:21:255,255,235,255,0,255	1/2:0,10,6:16:255,170,136,255,0,255	2/2:0,0,8:10:255,255,255,29,29,0
-chr21	18829614	chr21:18829614:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,2:17:7,0,255	0/0:12,0:12:0,36,255	1/1:0,3:3:77,9,0
-chr21	18829624	chr21:18829624:M	ATATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,22:35:255,0,255	0/1:2,10:16:255,0,26	1/1:0,30:36:255,108,0
-chr21	18831803	chr21:18831803:M	TTTATTTATTTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,16:29:224,0,166	0/1:14,23:37:255,0,146	0/1:20,18:38:227,0,255
-chr21	18846158	chr21:18846158:M	AATTAATTAATTAATTAATT	<6>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:12,12:25:160,0,163	0/1:10,8:20:113,0,123	1/1:0,32:33:255,97,0
-chr21	18848036	chr21:18848036:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,15:43:255,0,255	0/1:15,13:28:255,0,255	1/1:0,27:32:255,93,0
-chr21	18856187	chr21:18856187:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,6:18:122,0,250	0/1:19,14:33:255,0,255	1/1:0,27:28:255,81,0
-chr21	18859202	chr21:18859202:M	TATATATATATATATATATATATATGTATATATATATATATATATATATATATATATGTATATATATATATATATATATATATATATA	<9>,<16>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9,0:10:255,27,0,255,27,255	1/1:0,11,0:11:255,33,0,255,33,255	1/2:0,12,5:18:255,141,105,255,0,255
-chr21	18870047	chr21:18870047:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,23:40:255,0,199	0/1:11,11:22:129,0,129	0/1:21,30:52:255,0,228
-chr21	18884525	chr21:18884525:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,7,0:13:174,0,107,185,131,255	0/1:19,7,0:26:126,0,255,176,255,255	1/2:0,11,8:21:255,210,171,255,0,237
-chr21	18885273	chr21:18885273:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,1,10:24:230,161,255,0,255,255	0/1:9,18,0:30:255,0,210,255,240,255	0/2:13,0,11:28:238,184,255,0,255,255
-chr21	18891946	chr21:18891946:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:11:84,0,89	0/1:2,2:6:53,0,41	0/0:1,0:3:0,3,29
-chr21	18892031	chr21:18892031:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,4:13:137,0,214	0/1:6,1:11:15,0,212	0/1:3,0:6:11,0,84
-chr21	18901690	chr21:18901690:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:31:255,54,0	1/1:1,19:22:255,46,0	0/1:13,7:20:70,0,181
-chr21	18908717	chr21:18908717:M	GTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<7>	.	.	Motif=GTTTT	GT:AD:DP:PL	0/1:9,14:23:203,0,106	0/1:18,8:26:68,0,251	1/1:0,30:30:255,89,0
-chr21	18912184	chr21:18912184:M	TTTTTGTTTGTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,36:39:255,96,0	1/1:0,37:37:255,109,0
-chr21	18915208	chr21:18915208:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:38:255,94,0	1/1:3,38:42:255,70,0	1/1:0,53:55:255,161,0
-chr21	18920922	chr21:18920922:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,49:49:255,144,0	1/1:0,49:49:255,145,0
-chr21	18923133	chr21:18923133:M	AGATATAGATATAGATATAGATATAGATATAGATATA	<7.2>,<8.2>	.	.	Motif=AGATAT	GT:AD:DP:PL	0/1:16,23,0:39:255,0,197,255,255,255	0/2:6,0,16:22:255,255,255,0,107,109	1/2:0,18,8:26:255,149,75,255,0,255
-chr21	18926815	chr21:18926815:M	CCTCCCTCCCTCCCTCTCTTTTTTCCTTCCTTCCTCCCTCCCTCCCTCCTTCCTTTCCTTTCTCCCTCCCTCCCTCCC	<18.5>	.	.	Motif=CCTC	GT:AD:DP:PL	0/0:4,0:16:0,4,31	0/1:3,3:15:15,0,15	1/1:1,8:21:74,13,0
-chr21	18927353	chr21:18927353:M	GTGTGTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,37:37:255,109,0	1/1:0,33:34:255,100,0
-chr21	18942345	chr21:18942345:M	TCTCCCTCTCTCTCTCTCTCTCTCTCAATCTCTCTCTCT	<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,17:17:255,51,0	1/1:0,18:18:255,54,0	1/1:0,29:30:255,90,0
-chr21	18944354	chr21:18944354:M	CACACACACACACACACACACACACACGCACACACACAC	<18.5>,<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,20,0:34:255,0,160,255,220,255	1/2:1,18,9:31:255,148,182,255,0,255	0/2:20,2,12:34:118,179,255,0,255,255
-chr21	18945814	chr21:18945814:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,11,8:21:255,255,255,236,236,202,255,255,0,255	1/2:0,17,18,0:40:255,255,255,255,0,255,255,255,255,255	1/3:0,19,0,7:27:255,203,147,255,204,255,255,0,255,255
-chr21	18946786	chr21:18946786:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:30,16:46:156,0,255	0/1:20,16:37:193,0,255
-chr21	18957953	chr21:18957953:M	AAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:29:0,54,255	0/1:21,9:33:160,0,255	0/1:11,8:25:155,0,251
-chr21	18964657	chr21:18964657:M	CACACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/1:10,4:18:18,0,153	0/1:14,13:27:147,0,164
-chr21	18970348	chr21:18970348:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:85,9,0	0/0:6,1:9:0,1,164	0/0:11,0:12:0,36,255
-chr21	18981079	chr21:18981079:M	AAAAAAAAAAACAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,103,255	0/1:15,9:24:86,0,191	0/1:17,17:34:205,0,206
-chr21	18989204	chr21:18989204:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,55:57:255,130,0	0/1:23,14:37:143,0,255	1/1:0,51:51:255,151,0
-chr21	18989649	chr21:18989649:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,14:39:150,0,255	0/1:19,18:37:213,0,231	0/1:26,20:46:235,0,255
-chr21	18992545	chr21:18992545:M	TTTTTTTTTTTATTATTTTTT	<20>,<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,10,10,0:25:231,142,204,141,0,200,255,143,240,255	2/3:0,0,13,6:21:255,255,255,84,87,31,148,183,0,130	1/2:1,10,10,0:26:213,128,201,128,0,201,245,144,245,255
-chr21	19009436	chr21:19009436:M	AAAAAAAAAAATAAAAAATAAATAAAAAATAAAATAAAAAAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:21:200,0,47	0/0:6,1:7:0,4,86	0/1:7,10:17:126,0,73
-chr21	19022611	chr21:19022611:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,16,11:29:255,191,255,255,0,255	1/2:0,24,18:42:255,255,255,255,0,255	1/2:0,21,15:36:255,255,255,255,0,255
-chr21	19023140	chr21:19023140:M	AAAATAAAATAAAATAAAATAAAAAAATAAAATAAAATAATAAAATAAAATAAAATAAAACAAAACAAAATAAAA	<60>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,10:12:255,0,27	0/1:1,3:4:86,0,20	0/1:5,7:12:191,0,121
-chr21	19025137	chr21:19025137:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:26:143,0,171	0/1:15,19:35:231,0,162	0/1:19,20:40:242,0,233
-chr21	19036579	chr21:19036579:M	TTTCTTTCTTTCTTTCTTTCTTT	<3>,<3.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,4,3:7:188,22,1,26,0,5	1/1:0,0,0:1:13,3,0,6,1,4	0/0:13,1,0:17:0,10,255,17,255,255
-chr21	19036599	chr21:19036599:M	TTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,64,255	1/2:0,9,5:15:255,78,36,140,0,99	0/1:17,5,0:25:76,0,255,78,255,255
-chr21	19043910	chr21:19043910:M	ACACATACACACACACACACACACACACACACACACACACACACA	<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,12,0:13:193,21,0,196,38,222	1/2:0,7,4:12:210,76,44,97,0,82	0/1:10,9,0:19:99,0,116,129,169,255
-chr21	19066979	chr21:19066979:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,17:34:237,0,184	0/1:9,4:14:31,0,127	0/0:29,1:30:0,70,255
-chr21	19069366	chr21:19069366:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,6:24:255,160,106,255,0,255	1/2:0,6,13:23:255,255,255,114,0,115	0/1:20,12,0:33:123,0,255,215,255,255
-chr21	19071741	chr21:19071741:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:16:255,44,0	1/1:0,18:20:255,58,0	1/1:0,31:31:255,91,0
-chr21	19078947	chr21:19078947:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,4:14:255,71,77,239,0,223	0/1:1,5,0:8:144,0,23,137,26,155	0/2:2,0,4:7:61,70,162,0,33,15
-chr21	19081923	chr21:19081923:M	TTTATTTTATTTTATTTTATTTT	<3.6>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,33:33:255,97,0	1/1:0,36:36:255,106,0
-chr21	19082010	chr21:19082010:M	ACCTCCACCTCC	<1.8>	.	.	Motif=ACCTCC	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:17,21:38:255,0,255	0/0:27,0:27:0,81,255
-chr21	19094380	chr21:19094380:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAGAAAGAAAGAAAAAA	<47>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:53,9,0	0/1:1,2:5:39,0,3	1/1:0,6:9:122,23,0
-chr21	19095797	chr21:19095797:M	AAGGAAGGAAGGAAGAAAAGAAGGAAGGAAGGAA	<9.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:19,19:38:232,0,231	1/1:0,25:26:255,73,0	0/1:12,13:27:166,0,147
-chr21	19099925	chr21:19099925:M	AAAAAAAAATAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,2:35:0,68,255	0/1:20,22:43:239,0,216	0/0:54,0:54:0,158,255
-chr21	19102891	chr21:19102891:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:25,11:37:95,0,255	0/0:47,2:49:0,108,255
-chr21	19109672	chr21:19109672:M	TATCTATCTCTACTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<13>,<14>,<14.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,8,6,0:14:255,114,75,153,0,114,255,99,152,255	0/2:11,0,9,0:20:202,161,255,0,255,255,170,255,198,255	1/3:0,13,0,8:21:255,149,177,255,152,255,255,0,239,255
-chr21	19111472	chr21:19111472:M	AAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,9:15:255,161,125,70,0,36	1/2:0,7,2:10:223,31,4,116,0,100	2/2:0,1,8:11:248,157,132,30,12,0
-chr21	19111549	chr21:19111549:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3:14:12,0,158	0/0:28,2:31:0,56,255	0/1:10,13:25:165,0,113
-chr21	19118331	chr21:19118331:M	ACTCACTCACT	<2.5>	.	.	Motif=ACTC	GT:AD:DP:PL	1/1:0,52:52:255,144,0	1/1:0,40:40:255,111,0	1/1:0,39:39:255,108,0
-chr21	19121532	chr21:19121532:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:9:177,0,2	1/1:0,10:15:255,35,0	1/1:0,9:10:255,30,0
-chr21	19127600	chr21:19127600:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:82,9,0	0/1:3,4:12:101,0,66	0/1:6,2:11:26,0,151
-chr21	19128588	chr21:19128588:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0,0:17:0,50,255,50,255,255	0/1:1,3,0:6:47,0,3,50,4,88	0/2:3,0,9:12:120,153,255,0,44,17
-chr21	19135957	chr21:19135957:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:6:119,85,93,12,17,0	0/0:1,0,0:2:0,6,45,3,34,30	1/2:0,3,5:8:219,83,61,51,0,27
-chr21	19153216	chr21:19153216:M	ATATATATATATATA	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,29:32:255,87,0	1/1:0,27:29:255,81,0	1/1:0,41:41:255,123,0
-chr21	19153952	chr21:19153952:M	ATATATATATACATATATATATATATATATATATATAT	<24>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,3:12:255,39,12,255,0,247	1/2:0,0,2:3:37,26,23,12,0,6	1/1:0,3,0:4:107,12,0,107,12,107
-chr21	19154977	chr21:19154977:M	TTTTATTTTTTTTTTATTTTTTATTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:29:255,86,0	1/1:0,14:15:236,30,0	1/1:2,27:29:255,49,0
-chr21	19156588	chr21:19156588:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:120,15,0	0/1:4,2:8:65,0,104	1/1:0,2:4:76,10,0
-chr21	19157299	chr21:19157299:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,38:38:255,112,0	1/1:0,42:42:255,124,0
-chr21	19158838	chr21:19158838:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,38:39:255,96,0	0/1:14,16:30:201,0,164	1/1:1,38:39:255,96,0
-chr21	19161732	chr21:19161732:M	TTTTTTTTCTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:16:255,38,0	0/1:7,4:13:63,0,165	1/1:0,8:10:216,27,0
-chr21	19165953	chr21:19165953:M	TATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<9>,<13>,<14>	.	.	Motif=TATC	GT:AD:DP:PL	2/3:0,0,6,12:18:255,255,255,197,230,179,115,115,0,63	1/3:0,7,0,10:17:255,180,255,255,180,255,196,0,196,166	2/3:0,0,10,11:21:255,255,255,175,205,145,186,187,0,127
-chr21	19173721	chr21:19173721:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12,0:14:192,21,0,226,36,255	0/1:9,6,0:21:64,0,103,107,124,255	1/2:2,6,5:18:131,66,121,72,0,133
-chr21	19175582	chr21:19175582:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<10>,<10.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,10,0:13:211,32,0,64,14,33	1/1:0,2,0:3:39,6,0,12,2,6	1/2:0,12,9:24:255,62,1,71,0,10
-chr21	19175740	chr21:19175740:M	AAAAAAACAAAAACAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,15:15:255,44,0	0/1:11,8:19:94,0,151
-chr21	19183991	chr21:19183991:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,10:10:177,177,177,29,29,0	2/2:1,1,5:7:79,57,79,3,3,0	1/2:0,4,9:13:230,130,118,68,0,31
-chr21	19186895	chr21:19186895:M	ACACACACACACACACACACACACACACACACACACA	<17.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,7,11:18:255,255,255,194,195,144,105,124,0,72	1/2:0,16,15,0:33:255,249,255,255,0,255,255,250,255,255	0/3:11,0,2,14:27:255,255,255,210,255,255,0,196,160,249
-chr21	19189969	chr21:19189969:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:54,9,0	.	0/0:2,0:3:0,8,45
-chr21	19195354	chr21:19195354:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:3:78,9,0,49,8,41	0/1:7,2,0:9:23,0,150,25,91,93	2/2:1,3,11:18:136,79,135,1,7,0
-chr21	19195365	chr21:19195365:M	ATATATATATATATATATA	<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,13,7:24:255,114,46,240,0,181	0/1:7,1,0:13:1,0,197,21,203,221	0/2:13,0,6:25:111,75,255,0,255,255
-chr21	19200118	chr21:19200118:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25,0:25:255,74,0,255,74,255	1/1:0,6,0:6:106,18,0,106,18,106	1/2:0,9,7:16:255,126,80,137,0,116
-chr21	19200131	chr21:19200131:M	CACACACAAACACACACACACACACACACACACACACACACACACACA	<18>,<19>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,14,16:32:255,255,173,248,0,161	1/1:0,9,0:9:255,27,0,169,26,144	1/2:0,8,10:19:255,162,108,138,0,86
-chr21	19203510	chr21:19203510:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,74,0	0/1:20,25:46:255,0,221	0/1:26,20:48:237,0,255
-chr21	19204326	chr21:19204326:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,37:44:255,72,0	0/1:17,21:39:255,0,195	1/1:1,43:44:255,111,0
-chr21	19214306	chr21:19214306:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:74,9,0	1/1:0,2:3:49,6,0	1/1:0,6:7:162,21,0
-chr21	19216242	chr21:19216242:M	ACACACACACACACACACACAAACACACACACACACATACACACACACA	<27.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/0:19,0:20:0,60,255	0/1:10,11:23:249,0,211
-chr21	19223273	chr21:19223273:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,1:40:0,99,255	0/0:32,0:33:0,97,255	0/1:18,13:32:143,0,243
-chr21	19225155	chr21:19225155:M	TTTTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33,1:36:255,107,0,255,87,255	1/2:0,18,23:43:255,255,255,255,0,191	1/2:0,21,20:44:255,255,255,255,0,255
-chr21	19227216	chr21:19227216:M	AAAAAAAAAAACAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0,0:30:0,89,255,90,255,255	0/1:21,24,0:46:255,0,235,255,255,255	0/2:15,0,11:28:255,255,255,0,255,255
-chr21	19232571	chr21:19232571:M	TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCT	<22.5>,<23.5>,<24.5>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,1,11,9:21:255,255,255,123,106,61,161,105,0,100	2/3:0,4,11,10:25:255,255,255,135,78,61,190,64,0,120	1/2:0,16,9,0:27:255,123,45,228,0,153,255,97,224,255
-chr21	19232605	chr21:19232605:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTG	<14>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0:33:255,99,0,255,99,255	1/2:0,3,9:17:255,255,252,122,0,90	0/1:6,12,0:25:255,0,137,255,184,255
-chr21	19233751	chr21:19233751:M	TTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.2>,<9.2>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,12,9:21:255,163,103,217,0,158	1/1:0,22,0:23:255,69,0,255,68,255
-chr21	19242184	chr21:19242184:M	TTTTTTTTTTTTTCTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:31:0,62,255	0/1:18,17:37:255,0,255	0/0:26,0:28:0,83,255
-chr21	19248635	chr21:19248635:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:40:0,118,255	0/1:18,10:28:96,0,238	0/0:44,0:45:0,132,255
-chr21	19253451	chr21:19253451:M	TATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,52:53:255,159,0	1/1:0,16:19:255,48,0	1/1:0,16:16:255,48,0
-chr21	19254775	chr21:19254775:M	TATATATATATATATATATA	<8>,<9>,<12>	.	.	Motif=TA	GT:AD:DP:PL	3/3:0,0,0,27:27:255,255,255,255,255,255,81,81,81,0	2/3:0,0,16,5:21:255,255,255,138,141,94,255,255,0,255	1/3:0,14,0,12:28:255,255,255,255,255,255,255,0,255,255
-chr21	19260501	chr21:19260501:M	CACACACACACACACACACACACACACACACACACACACACACACACA	<13>,<25>	.	.	Motif=CA	GT:AD:DP:PL	0/2:10,0,3:13:14,52,255,0,172,135	0/2:8,0,8:17:86,132,255,0,132,86	0/1:5,18,0:23:255,0,77,255,84,255
-chr21	19261662	chr21:19261662:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:79,9,0	1/1:0,4:5:108,13,0	1/1:0,2:2:54,6,0
-chr21	19266518	chr21:19266518:M	ATATATATATATATATATGTATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:31,0:36:0,93,255	0/1:10,13:24:255,0,186	0/0:34,0:35:0,102,255
-chr21	19266542	chr21:19266542:M	ACACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:22,27:49:255,0,237	0/1:16,11:27:103,0,186	0/0:42,1:44:0,111,255
-chr21	19267499	chr21:19267499:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<7.5>,<12.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,29,0:29:255,255,255,86,87,0,255,255,87,255	1/2:0,16,16,0:33:255,255,255,255,0,255,255,255,255,255	2/3:1,0,7,19:27:255,255,255,255,255,255,112,200,0,137
-chr21	19271087	chr21:19271087:M	AAAATAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0,0:30:0,89,255,86,255,255	0/2:15,0,17:32:255,255,255,0,255,255	0/1:8,22,0:32:255,0,162,255,217,255
-chr21	19271733	chr21:19271733:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:0,17:18:255,52,0	1/1:0,12:12:220,35,0
-chr21	19274180	chr21:19274180:M	TTTTTCTTTCTTTCTTTTCTTTTTTTTTTTCTTTTCTTTCTTTTTTTTATTTTTTT	<59>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:13:0,39,255	0/1:4,7:12:193,0,83	0/1:9,7:17:177,0,213
-chr21	19276693	chr21:19276693:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:50,0:52:0,153,255	0/1:13,23:37:255,0,132	0/0:56,2:58:0,134,255
-chr21	19278413	chr21:19278413:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/1:23,11:35:102,0,255	0/1:12,19:32:255,0,126
-chr21	19283563	chr21:19283563:M	ACACACATACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:35,0:35:0,98,255	0/0:29,0:29:0,81,255	0/1:10,22:36:206,0,52
-chr21	19288908	chr21:19288908:M	ATACATACATACATACATACATACATACATACATACATACATACATAC	<11>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:11,11:23:140,0,130	0/0:16,0:17:0,50,255
-chr21	19292919	chr21:19292919:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:2,21:24:255,33,0	0/1:12,11:24:121,0,149	0/1:12,14:27:172,0,144
-chr21	19295856	chr21:19295856:M	ACAACAACAACAACAACAACAACAACAACGACAACAA	<13.3>	.	.	Motif=ACA	GT:AD:DP:PL	1/1:0,38:38:255,112,0	0/1:16,15:31:180,0,198	0/1:10,13:24:173,0,125
-chr21	19299309	chr21:19299309:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:32:0,93,255	0/0:26,1:28:0,64,255	0/1:34,13:47:91,0,255
-chr21	19309904	chr21:19309904:M	TTTTTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,4,5:11:143,51,55,24,0,60	0/1:3,2,0:5:19,0,35,28,49,101	0/2:7,0,2:10:26,33,127,0,117,169
-chr21	19324621	chr21:19324621:M	ACACAAACACACACACACACATACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,33:33:255,99,0	0/1:11,10:23:216,0,233
-chr21	19328514	chr21:19328514:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:0,0,62	0/0:0,0:1:0,3,11	0/1:2,3:5:36,0,19
-chr21	19329744	chr21:19329744:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,28:28:255,82,0	0/1:17,18:35:230,0,209
-chr21	19331481	chr21:19331481:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,3:8:115,35,31,43,0,58	0/1:4,5,0:9:59,0,42,71,68,173	0/2:4,0,4:9:84,68,123,0,75,95
-chr21	19341575	chr21:19341575:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:21,0,102	0/1:2,7:9:92,0,7	0/1:10,7:19:67,0,138
-chr21	19345531	chr21:19345531:M	TATATATATATATATATATATA	<8>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,35,0:36:255,105,0,255,105,255	1/2:0,9,5:15:255,88,110,244,0,229	1/2:0,21,10:32:255,191,217,255,0,255
-chr21	19349676	chr21:19349676:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,6:11:104,116,184,5,13,0	1/2:1,5,5:13:136,70,112,82,0,130	0/0:7,1,0:12:0,6,107,22,109,136
-chr21	19367520	chr21:19367520:M	ATATATATATATATATATATATA	<12.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:9,3,6:18:135,63,180,0,119,228	1/2:0,5,1:7:112,28,10,74,0,68	0/0:26,0,0:26:0,77,255,78,255,255
-chr21	19372104	chr21:19372104:M	AAAAAAAAAAAGAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17:38:206,0,255	0/0:31,2:33:0,62,255	0/1:15,18:33:232,0,176
-chr21	19372547	chr21:19372547:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:29:161,0,204	0/0:32,6:39:0,7,255	1/1:0,41:43:255,126,0
-chr21	19375706	chr21:19375706:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:55,0,3	0/1:2,1:5:24,0,19	.
-chr21	19400235	chr21:19400235:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:20:0,55,255	0/1:12,6:22:49,0,162	0/0:17,1:21:0,41,255
-chr21	19403322	chr21:19403322:M	ATCTATGTATCTATGTATCTATGTATCTATCTATGTATCTATCTATCTATCTATCTAT	<12.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:8,8:16:159,0,166	0/0:16,0:16:0,48,255	1/1:0,32:32:255,96,0
-chr21	19408203	chr21:19408203:M	ACACACACACACACACACACACACACACACACACA	<12.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,26,0:45:255,0,255,255,255,255	0/2:14,0,11:25:118,189,255,0,242,171	1/1:0,32,0:33:255,99,0,255,99,255
-chr21	19408262	chr21:19408262:M	TACATATACATATACATATACATATACATATA	<4.3>	.	.	Motif=TACATA	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:9,11:20:141,0,105	0/0:26,0:26:0,77,255
-chr21	19409697	chr21:19409697:M	ATATATATATATACATAAATTTATTTTATATATAATGGTATTATATTATATATAT	<28.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:7,5:12:55,0,89	0/0:13,0:14:0,41,248
-chr21	19439900	chr21:19439900:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,1:4:74,16,16,30,0,22	0/2:2,0,3:6:67,49,106,0,55,42	1/2:0,4,1:5:130,16,2,65,0,50
-chr21	19455460	chr21:19455460:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,2:19:0,19,255	0/1:11,11:24:139,0,122	0/0:24,3:28:0,28,255
-chr21	19459035	chr21:19459035:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:25:205,0,100	1/1:0,14:15:254,44,0	0/0:29,4:34:0,28,255
-chr21	19459199	chr21:19459199:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:20:0,54,255	0/1:10,8:21:155,0,213	0/0:17,0:18:0,54,255
-chr21	19460879	chr21:19460879:M	ATATATATATATATATATATATATA	<9.5>,<10.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:1,7,2,12:22:255,164,255,205,158,202,156,0,76,121	1/2:0,16,17,1:35:255,243,155,238,0,141,255,183,222,255	3/3:3,1,1,25:31:255,255,255,255,255,255,35,61,60,0
-chr21	19461588	chr21:19461588:M	CACACACACCACACACACATACACACACACACACACA	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,10:22:221,0,211	0/1:7,6:13:126,0,156	0/0:34,0:34:0,102,255
-chr21	19461624	chr21:19461624:M	AGAGAGAGAAAGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:7,12:19:239,0,117	0/1:7,12:20:234,0,115	0/0:38,0:38:0,114,255
-chr21	19463455	chr21:19463455:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,47:49:255,127,0	1/1:0,30:34:255,99,0	0/1:13,24:40:255,0,118
-chr21	19463993	chr21:19463993:M	ATATATATATATATATATATATATATATA	<15.5>,<20.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,6,8:16:255,210,205,72,0,144	0/2:0,0,1:3:21,27,45,0,21,22	1/1:1,15,0:16:203,31,0,249,48,255
-chr21	19466458	chr21:19466458:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,5:5:88,88,88,15,15,0	0/0:2,0,0:2:0,6,56,6,39,34	1/2:0,3,6:9:160,86,77,51,0,26
-chr21	19472165	chr21:19472165:M	CACACACACACA	<4>,<5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,8:19:255,126,93,201,0,148	1/1:0,12,0:12:255,36,0,243,35,211	2/2:0,0,24:24:255,255,255,71,71,0
-chr21	19472176	chr21:19472176:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<19.5>,<20.5>,<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:2,8,4,1,0:16:255,0,31,37,9,67,163,35,90,192,255,48,93,219,255	2/4:0,0,4,0,3:9:179,103,112,51,63,45,72,67,32,58,82,44,0,43,69	1/3:0,9,2,7,0:18:255,157,109,166,58,113,209,0,81,157,255,83,146,205,255
-chr21	19473227	chr21:19473227:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,13:28:255,255,255,241,0,255	1/2:0,15,10:25:255,255,212,255,0,255	1/1:0,45,0:45:255,133,0,255,135,255
-chr21	19486176	chr21:19486176:M	GTGTGTTTGTGTGTGTGTGTGTGTGTGTTGTGTATGTGT	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,24:43:255,0,235	0/0:20,0:20:0,59,255	0/1:18,11:30:116,0,254
-chr21	19488881	chr21:19488881:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:22:255,63,0,255,63,255	1/2:0,7,10:20:255,247,228,201,0,171	0/1:11,8,0:22:178,0,255,211,255,255
-chr21	19491193	chr21:19491193:M	TCTCTCTCTCTCTCTCTCTTCTC	<10.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,19:19:255,56,0	0/1:19,14:34:173,0,255
-chr21	19497486	chr21:19497486:M	AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0:12:0,34,183	0/1:7,13:24:160,0,41	0/0:14,1:17:0,30,210
-chr21	19501510	chr21:19501510:M	ATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,2:42:0,77,255	0/1:22,17:41:255,0,255	0/0:46,0:46:0,138,255
-chr21	19503371	chr21:19503371:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:1,27:28:255,64,0	1/1:0,34:34:255,100,0
-chr21	19503569	chr21:19503569:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,26,26:53:255,255,255,255,0,255	1/2:0,23,18:42:255,255,255,255,0,255	0/1:18,21,0:39:255,0,223,255,255,255
-chr21	19504846	chr21:19504846:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,3,4:7:106,125,189,71,106,96,53,80,0,66	1/2:0,21,7,0:31:255,148,164,255,0,255,255,221,255,255	0/3:3,0,1,9:13:122,158,255,140,255,255,0,63,27,27
-chr21	19509772	chr21:19509772:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,15:37:255,0,255	0/1:15,13:33:255,0,255	0/0:35,0:36:0,108,255
-chr21	19518955	chr21:19518955:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,28:29:255,87,0	0/1:11,15:29:255,0,221	0/1:16,16:33:255,0,255
-chr21	19524780	chr21:19524780:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,0,9:19:194,145,255,0,255,238	1/2:0,1,4:6:124,63,49,16,0,1	0/1:8,7,0:15:142,0,178,111,204,255
-chr21	19531621	chr21:19531621:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:17:201,0,4	1/1:3,23:27:255,27,0	0/0:21,1:23:0,50,255
-chr21	19533104	chr21:19533104:M	ACACACACACATACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,21:28:255,0,49	1/1:1,22:23:255,50,0	0/1:13,11:25:134,0,167
-chr21	19536416	chr21:19536416:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,2:47:0,102,255	0/0:35,2:39:0,79,255	0/1:22,18:41:205,0,255
-chr21	19536947	chr21:19536947:M	TATATATATATATATAT	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:28,0:31:0,61,179	0/0:8,0:8:0,16,46	0/1:7,12:22:27,0,10
-chr21	19543970	chr21:19543970:M	GTTTTTTGTTTGTTTTGTTTTTTTTTTGTTTTGTTTGTTTGTTTGTTT	<12.2>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:6,9:15:142,0,80	1/1:1,22:23:255,48,0	0/0:11,1:12:0,15,208
-chr21	19545826	chr21:19545826:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:4,0,103	1/1:0,6:7:94,17,0	0/0:9,0:10:0,29,156
-chr21	19546365	chr21:19546365:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	.	0/1:2,3:5:33,0,17	0/0:1,0:2:0,6,29
-chr21	19549187	chr21:19549187:M	TCTCTCTCTCTCTCTCTCTCTC	<7>,<9>,<10>	.	.	Motif=TC	GT:AD:DP:PL	0/2:13,7,12,1:33:238,99,255,0,142,223,157,142,146,247	1/2:0,20,7,0:30:255,145,77,255,0,255,255,84,255,255	0/3:7,0,1,10:20:86,127,255,77,255,230,0,91,75,44
-chr21	19549208	chr21:19549208:M	CACACACACACACACACACACACACACACACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,18:21:255,56,0	1/1:0,27:35:255,94,0	0/1:8,7:18:55,0,79
-chr21	19550359	chr21:19550359:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,13:29:154,0,210	0/1:19,13:32:133,0,238	0/0:16,2:18:0,17,252
-chr21	19551108	chr21:19551108:M	ATAGATAGGTAGGTAGGTAAATAGATTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<15.5>,<17.5>	.	.	Motif=ATAG	GT:AD:DP:PL	0/0:13,0,0:13:0,38,250,38,250,250	0/1:9,7,0:16:79,0,116,124,137,255	0/2:11,0,6:17:62,110,255,0,174,155
-chr21	19553279	chr21:19553279:M	ACACACACACATACACACACATACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:32:255,93,0	0/1:22,11:33:195,0,255	1/1:0,22:24:255,66,0
-chr21	19556560	chr21:19556560:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,42:44:255,93,0	0/1:20,11:32:101,0,255	1/1:0,29:29:255,85,0
-chr21	19563350	chr21:19563350:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:26:255,62,0	0/1:13,18:33:225,0,138	1/1:2,27:29:255,49,0
-chr21	19572358	chr21:19572358:M	CTCTCTCTCTTTCTCTATGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTC	<33.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:13,0:14:0,42,255	0/1:5,3:10:75,0,103	0/0:13,0:13:0,39,255
-chr21	19572418	chr21:19572418:M	CACACACACACACACACACACACACACACACACACACACACACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,2,9:11:254,122,92,33,5,0	2/2:0,0,8:8:192,124,102,24,22,0	1/2:0,7,3:11:242,40,19,90,0,60
-chr21	19574283	chr21:19574283:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/1:7,4:11:37,0,91	0/0:22,0:22:0,65,255
-chr21	19575396	chr21:19575396:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:20,9:29:70,0,255	0/0:38,0:39:0,114,255
-chr21	19577467	chr21:19577467:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:22:255,46,0	0/1:3,9:21:150,0,6	1/1:3,24:29:255,21,0
-chr21	19579446	chr21:19579446:M	TATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:22,0:24:0,71,255	0/1:5,7:12:160,0,104	0/0:14,0:14:0,42,255
-chr21	19582403	chr21:19582403:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:13,22:38:255,0,135	0/0:25,1:27:0,61,255
-chr21	19595617	chr21:19595617:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAGAAAAGAAAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,10:24:59,0,19	0/0:18,1:24:0,39,168	0/1:18,7:36:12,0,112
-chr21	19630647	chr21:19630647:M	GAGAGAGAGAGAGA	<9>	.	.	Motif=GA	GT:AD:DP:PL	0/1:12,16:28:255,0,251	0/1:8,16:25:255,0,149	0/1:14,14:28:255,0,255
-chr21	19632074	chr21:19632074:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<11>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:11,11:22:148,0,148	0/0:13,0:13:0,38,236	0/1:15,9:24:98,0,212
-chr21	19634033	chr21:19634033:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:200,0,171	0/1:15,9:24:87,0,192	0/1:23,15:38:159,0,255
-chr21	19634255	chr21:19634255:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,0,15:30:198,242,255,0,255,189	0/1:13,22,1:36:255,0,255,255,213,255	0/2:13,2,17:32:242,230,255,0,201,148
-chr21	19640047	chr21:19640047:M	TTTATGTATTTATGTATGTATGTATATATGTATGTATGTATGTATTTATTTATTTATTTATTTATTTATTT	<18.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:2,6:8:91,0,14	0/0:2,0:2:0,6,36	0/1:7,3:10:26,0,100
-chr21	19642719	chr21:19642719:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:119,20,0	0/1:1,2:5:24,0,9	0/0:2,0:2:0,6,35
-chr21	19661574	chr21:19661574:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:2,29:31:255,56,0	1/1:1,33:36:255,87,0
-chr21	19664497	chr21:19664497:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,9:22:106,0,135	0/1:14,11:27:109,0,180	0/0:21,0:23:0,65,255
-chr21	19672721	chr21:19672721:M	AAAAAAAAAAAACAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,9:32:74,0,255	0/1:16,14:32:153,0,216	0/0:36,1:38:0,93,255
-chr21	19672790	chr21:19672790:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,2:38:0,75,255	0/0:34,1:37:0,91,255	0/1:11,7:18:74,0,146
-chr21	19674852	chr21:19674852:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:29:255,0,122	0/0:33,2:35:0,67,255	0/1:23,24:47:255,0,255
-chr21	19689224	chr21:19689224:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<13.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,14,18:33:255,255,235,200,0,170	0/1:13,15,0:30:174,0,162,219,242,255	1/2:0,16,16:32:255,255,194,242,0,194
-chr21	19690717	chr21:19690717:M	TCCTTTCCTTT	<1.6>	.	.	Motif=TCCTT	GT:AD:DP:PL	0/0:44,0:45:0,124,255	0/0:44,0:44:0,132,255	0/1:18,26:45:255,0,255
-chr21	19692886	chr21:19692886:M	TTTTGTTTTTTGTTTTGTTTTTGTTTTTGTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,99,0	0/1:15,16:31:255,0,255	1/1:0,28:28:255,84,0
-chr21	19701141	chr21:19701141:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,3,1:4:111,108,106,17,17,5,51,51,0,39	1/1:0,1,0,0:1:31,3,0,30,3,29,31,3,29,31	1/3:0,3,0,3:8:170,79,67,127,46,114,90,0,77,80
-chr21	19702654	chr21:19702654:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:11:147,15,0	0/1:5,10:17:118,0,46	0/1:2,7:11:111,0,2
-chr21	19703633	chr21:19703633:M	ACACACACACACACACACACACAACATGCACACACACACACACA	<21>,<23>,<27>	.	.	Motif=AC	GT:AD:DP:PL	2/3:1,0,22,11:34:255,255,255,255,255,237,255,255,0,255	0/3:13,0,0,7:21:155,193,255,193,255,255,0,228,228,255	1/2:0,14,12,0:27:255,215,255,253,0,255,255,255,255,255
-chr21	19716793	chr21:19716793:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:23:0,50,255	0/0:21,1:22:0,47,255	0/1:20,16:37:185,0,245
-chr21	19732112	chr21:19732112:M	TATAGTATATATATATATGTGTATATGTCTATATATATATATATATATA	<23.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,7:17:80,0,136	0/1:4,1:5:3,0,55	0/1:9,10:19:126,0,107
-chr21	19737378	chr21:19737378:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,13,7:20:255,255,255,124,125,66,195,231,0,174	1/3:0,25,2,3:32:255,105,56,255,39,255,255,0,255,255	2/2:0,0,19,2:21:255,255,255,61,63,0,255,255,27,255
-chr21	19753579	chr21:19753579:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,10:30:255,186,101,255,0,255	1/2:1,17,11:30:255,188,122,237,0,227	2/2:1,3,32:36:255,255,255,70,39,0
-chr21	19758802	chr21:19758802:M	ACACACACACACACACACGCACACACACACAATACACACA	<19>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,12,0:22:166,0,128,226,164,255	0/1:14,17,0:31:216,0,162,255,213,255	0/2:17,1,18:36:232,255,255,0,251,223
-chr21	19761215	chr21:19761215:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,20:44:255,0,255	1/1:0,42:43:255,126,0	0/0:49,0:49:0,145,255
-chr21	19761608	chr21:19761608:M	TGTGTGTGTGTATGTGTGTGTGTGTATGTGTGTGTGTGTGTGTATGTGTGTGTG	<28>,<29>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,7,16:24:255,255,200,98,0,50	2/2:0,2,15:17:255,254,208,45,17,0	1/2:0,11,3:14:219,48,8,148,0,139
-chr21	19767479	chr21:19767479:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,19:39:239,0,248	1/1:1,23:25:255,55,0	0/0:31,0:31:0,91,255
-chr21	19772465	chr21:19772465:M	AAACAAACAAACAAACAAACAAACAAAAAACA	<9>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:22,12:34:118,0,255	0/0:27,0:27:0,80,255
-chr21	19773283	chr21:19773283:M	TATATATATATATATATATACACACATATATATACACATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	.	.	1/1:0,4:4:47,11,0
-chr21	19773353	chr21:19773353:M	TATATATATATATATATATATATATATATATATATATATATATAT	<11.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:1,0,0:5:0,6,52,6,52,52	0/0:0,0,0:1:0,3,22,3,22,22	1/2:0,10,4:16:255,48,18,255,0,255
-chr21	19774104	chr21:19774104:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:0,43:45:255,131,0	1/1:0,45:46:255,135,0
-chr21	19775100	chr21:19775100:M	CACACACACACACACACACACACACACACACACACACA	<18>,<20>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/3:1,12,2,7:25:255,167,161,255,139,255,167,0,255,255	3/3:0,0,0,27:29:255,255,255,255,255,255,87,87,87,0	1/2:0,14,13,0:28:255,202,255,227,0,255,255,255,255,255
-chr21	19789077	chr21:19789077:M	ACCCCCACCCCC	<2.2>	.	.	Motif=ACCCCC	GT:AD:DP:PL	0/1:19,13:32:239,0,255	0/0:24,0:24:0,72,255	0/1:20,9:29:145,0,255
-chr21	19790838	chr21:19790838:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:144,15,0	.	1/1:0,1:4:31,4,0
-chr21	19801794	chr21:19801794:M	TTTGTTTGCTTGTTTGTTTGTTTGTTTTTTG	<8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:18,11:29:207,0,255	1/1:0,35:35:255,105,0	0/0:30,0:30:0,90,255
-chr21	19804190	chr21:19804190:M	TGTGTGTGTGTGTGTGTG	<8>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,7:21:28,0,113	0/1:5,6:11:42,0,30	0/0:35,0:36:0,99,255
-chr21	19804207	chr21:19804207:M	GAGAGAGAGAGAGAGAGAGAGAGAGA	<15>,<16>	.	.	Motif=GA	GT:AD:DP:PL	0/2:15,2,17:34:255,208,255,0,255,255	1/2:0,5,16:21:255,219,158,70,0,9	0/1:16,12,0:31:221,0,255,171,255,255
-chr21	19804942	chr21:19804942:M	TGTTTTTTTTGTTGTTTGTTTTTTTGTTTTTTTTTTGTTTTGTTTTGTTTTG	<9.2>,<10.8>,<11>	.	.	Motif=TGTTT	GT:AD:DP:PL	1/2:0,9,9,1:19:255,239,216,255,0,242,255,140,254,255	1/1:0,14,0,0:14:255,42,0,255,42,255,255,42,255,255	2/3:0,0,4,5:9:251,252,254,90,90,64,70,71,0,45
-chr21	19806519	chr21:19806519:M	AAAAAAAAAAAAA	<10>,<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,25,1,23:49:255,255,255,255,255,255,255,0,255,255	1/1:0,49,1,0:50:255,150,0,255,129,255,255,147,255,255	2/3:0,0,19,14:33:255,255,255,222,255,165,255,255,0,255
-chr21	19807245	chr21:19807245:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:26:135,151,255,0,234,180	2/2:1,5,24:30:255,255,255,70,1,0	0/1:10,9,3:26:226,0,228,138,139,255
-chr21	19816728	chr21:19816728:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,17,23:41:255,255,255,255,0,214	1/1:0,34,0:34:255,100,0,255,100,255	2/2:0,1,41:43:255,255,255,126,108,0
-chr21	19821060	chr21:19821060:M	TGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,11:24:182,0,203	0/0:10,0:10:0,30,223	1/1:0,27:28:255,81,0
-chr21	19821070	chr21:19821070:M	TATATATATATATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:4,14:22:255,0,95	0/0:6,0:8:0,24,186	1/1:0,26:29:255,70,0
-chr21	19823974	chr21:19823974:M	TTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,2,4:19:59,30,255,0,255,255	1/2:0,3,9:12:251,131,99,44,0,10	0/0:30,0,0:33:0,98,255,98,255,255
-chr21	19829448	chr21:19829448:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:50,0:51:0,150,255	0/0:43,0:43:0,126,255	0/1:19,25:44:255,0,218
-chr21	19832180	chr21:19832180:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:44:0,111,255	0/0:35,3:38:0,58,255	0/1:23,23:47:255,0,255
-chr21	19832679	chr21:19832679:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/0:30,0:30:0,88,255	0/1:26,23:49:255,0,255
-chr21	19836593	chr21:19836593:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:17:255,30,0	1/1:0,28:29:255,85,0	0/1:16,15:31:183,0,201
-chr21	19846516	chr21:19846516:M	CTTTTCTTTTCTTTTTTTTTTTTCCTTTT	<6>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:26,0:26:0,77,255	0/1:10,7:17:97,0,161
-chr21	19846696	chr21:19846696:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,1:7:0,2,91	0/0:10,0:11:0,32,179	0/1:10,7:18:71,0,133
-chr21	19857142	chr21:19857142:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:92,0,101	0/0:16,1:18:0,36,255	1/1:1,9:10:138,12,0
-chr21	19861089	chr21:19861089:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:255,0,255	1/1:0,22:23:255,69,0	0/0:36,0:37:0,111,255
-chr21	19867626	chr21:19867626:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/1:24,29:53:255,0,255	1/1:0,44:45:255,132,0	0/1:17,20:37:255,0,211
-chr21	19868263	chr21:19868263:M	CTCTCTGTCTCTCTCTCTCTCTCTCTCTC	<11.5>,<12.5>	.	.	Motif=CT	GT:AD:DP:PL	0/2:10,1,14:29:255,206,255,0,255,234	2/2:0,2,22:24:255,255,255,72,38,0	0/1:18,13,0:32:255,0,255,204,255,255
-chr21	19868291	chr21:19868291:M	CACACACACACACACACACACAC	<12.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/2:18,6,6:32:93,91,242,0,148,255	1/2:0,11,11:25:255,255,255,125,0,255	0/2:17,0,0:27:72,88,224,0,190,255
-chr21	19872748	chr21:19872748:M	AATAAATAAATAAATAAATAAATAAATAAATAAAT	<7.8>,<10.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/1:18,13,0:31:162,0,255,250,255,255	1/1:0,32,0:32:255,94,0,255,96,255	0/2:10,0,11:21:255,255,255,0,186,231
-chr21	19884356	chr21:19884356:M	GTGTGTGTGTGTGTGTGTCTGTGTGTCTGTGTCTGTGTGTCTTGTGTATGTGTG	<28>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,9:20:111,0,149	1/1:0,21:21:255,62,0	0/1:14,4:18:21,0,205
-chr21	19885166	chr21:19885166:M	AAAAAAAAAAAATAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:45,0:45:0,132,255	0/1:21,9:30:77,0,255
-chr21	19892061	chr21:19892061:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,8:19:93,0,150	1/1:1,19:20:255,41,0	0/1:10,9:20:116,0,124
-chr21	19898883	chr21:19898883:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTC	<10>,<11>	.	.	Motif=TC	GT:AD:DP:PL	0/1:7,11,0:19:255,0,153,193,179,255	1/1:0,21,0:23:255,68,0,255,64,255	0/2:11,1,5:17:97,69,255,0,255,255
-chr21	19907271	chr21:19907271:M	AAAAAAAAAAAAAAAAAAAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:84,15,0	.	0/1:1,2:3:24,0,8
-chr21	19908336	chr21:19908336:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:3,22:29:255,31,0	1/1:3,36:42:255,68,0
-chr21	19913097	chr21:19913097:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:24:203,0,94	1/1:0,26:28:255,81,0	0/0:26,4:31:0,19,255
-chr21	19923167	chr21:19923167:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/1:17,11:28:131,0,242	0/0:8,0:8:0,24,144	1/1:0,19:19:255,56,0
-chr21	19923189	chr21:19923189:M	ATATATATATTTTATATATAATTATATATTAATGATATTAATATATATATATATATATAT	<29>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:9:172,27,0	1/1:0,2:2:35,6,0	1/1:0,7:7:130,21,0
-chr21	19927431	chr21:19927431:M	AAAGAAAGAAAAGAAAGAAAGA	<4.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:23,9:32:12,0,163	0/0:27,0:27:0,71,255	0/1:14,5:19:3,0,99
-chr21	19927503	chr21:19927503:M	GAAAGGAAGAAAGAAAAGACAAGAAAGAAAGACAAGAAA	<10>	.	.	Motif=GAAA	GT:AD:DP:PL	0/0:25,0:25:0,37,95	0/0:32,0:34:0,49,125	0/1:16,14:34:5,0,21
-chr21	19927539	chr21:19927539:M	AAAATAAAAAAAGAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:30,0:30:0,88,255	0/1:13,11:24:135,0,172
-chr21	19930365	chr21:19930365:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:29:173,0,191	1/1:1,35:42:255,103,0	0/1:12,27:43:255,0,91
-chr21	19932510	chr21:19932510:M	TGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/0:25,0:26:0,68,255	0/1:25,14:42:255,0,255
-chr21	19932524	chr21:19932524:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,16:21:210,33,0	1/1:4,20:25:210,20,0	1/1:4,18:24:198,16,0
-chr21	19945535	chr21:19945535:M	TGTTTGTTTGT	<1.8>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:38,0:38:0,111,255	0/0:34,0:34:0,99,255	0/1:18,18:36:192,0,193
-chr21	19954852	chr21:19954852:M	TTTATTTTATTTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<12.5>,<12.8>	.	.	Motif=TTTA	GT:AD:DP:PL	2/2:0,0,18:18:255,255,255,53,54,0	2/2:0,0,7:7:128,138,152,21,21,0	1/2:0,9,9:18:255,154,141,189,0,141
-chr21	19955308	chr21:19955308:M	ATATATATATGTATTTATGTATACATATATATATTTATGTATACATACATATGTATTTATGTGTATATATAT	<2.5>	.	.	Motif=ATAT	GT:AD:DP:PL	0/1:7,12:22:255,0,102	1/1:1,7:8:255,1,0	0/1:10,8:18:255,0,175
-chr21	19970267	chr21:19970267:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<10>,<13>,<14>	.	.	Motif=CCTT	GT:AD:DP:PL	0/2:15,0,6,0:21:51,112,255,0,255,220,96,255,255,255	0/3:6,0,0,12:18:255,255,255,208,255,255,0,158,104,121	1/2:0,9,13,0:23:255,235,255,243,0,209,255,231,244,255
-chr21	19970328	chr21:19970328:M	TTCTTTTCTTTTTTTTTTTTTTTTTTCT	<5.4>	.	.	Motif=TTCTT	GT:AD:DP:PL	1/1:0,4:5:73,14,0	1/1:0,2:3:43,9,0	1/1:0,5:5:75,14,0
-chr21	19972118	chr21:19972118:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:113,15,0	1/1:0,6:6:180,18,0	1/1:1,6:11:203,3,0
-chr21	19976356	chr21:19976356:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGGAAAAGAAAAAGAGAAAAAGAAAAAAAA	<54>,<55>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,2:13:0,33,255,2,197,162	0/2:7,0,3:10:23,44,211,0,117,90	0/1:5,4,0:9:96,0,113,70,86,132
-chr21	19977966	chr21:19977966:M	AAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,5,20:28:255,255,255,103,0,29	1/2:0,7,17:25:255,255,218,119,0,48	0/2:5,2,11:19:255,155,255,0,93,85
-chr21	19983891	chr21:19983891:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	<10.8>,<11.8>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:12,8,7:27:97,0,175,21,61,72	1/2:2,8,7:17:159,35,44,59,0,36	0/2:14,0,9:23:31,72,255,0,140,81
-chr21	19983947	chr21:19983947:M	CATACATACATACATACATA	<6>,<7>	.	.	Motif=CATA	GT:AD:DP:PL	1/2:0,18,24:49:255,213,159,100,0,132	0/1:12,19,0:33:134,0,74,176,162,255	1/2:3,14,19:36:255,190,129,99,0,102
-chr21	19985279	chr21:19985279:M	TGTGTGTGTGTGTGTGTGTGCGCATGTGGTGTGTGTCTATGTGTGTGTGT	<24>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,19:19:255,56,0	1/1:0,21:22:255,64,0
-chr21	19986791	chr21:19986791:M	TTTTTTTTGTTTTTTTTTTT	<21>,<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,4,12:16:255,255,255,190,190,144,65,64,0,17	3/3:0,0,1,24:25:255,255,255,255,255,255,75,75,57,0	1/2:1,18,8,0:27:255,184,138,255,0,255,255,123,255,255
-chr21	19990678	chr21:19990678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,43:45:255,96,0	1/1:2,31:33:255,62,0	1/1:1,39:41:255,92,0
-chr21	19992034	chr21:19992034:M	ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<12.2>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:13,8:21:92,0,189	0/1:3,0:5:7,0,40	0/1:12,8:20:91,0,167
-chr21	20008399	chr21:20008399:M	CACACACACACACACACACACACACAC	<15.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:3,20,0:24:255,0,10,255,77,255	0/1:2,15,0:20:255,0,1,255,58,255	1/2:1,13,16:33:255,255,255,255,0,255
-chr21	20012563	chr21:20012563:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:0,23:23:255,67,0	1/1:1,34:36:255,88,0
-chr21	20018873	chr21:20018873:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,14:25:194,0,112	1/1:0,29:32:255,93,0	0/1:5,13:19:188,0,35
-chr21	20034153	chr21:20034153:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:22:135,0,136	0/0:22,2:25:0,38,255	0/1:5,6:14:70,0,78
-chr21	20034579	chr21:20034579:M	TATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTTCTATCT	<13>,<19.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,8,5:13:255,95,107,208,0,194	1/1:0,17,0:17:255,51,0,255,51,255	1/2:0,8,6:14:255,111,132,210,0,192
-chr21	20039938	chr21:20039938:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,79,0	1/1:1,30:31:255,73,0	1/1:2,28:30:255,52,0
-chr21	20044416	chr21:20044416:M	TTTTTTTTTTTTTT	<15>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,13,1,3:19:255,72,46,247,62,255,230,0,227,255	1/1:1,23,1,0:25:255,55,0,255,56,255,255,75,255,255	2/3:0,2,12,7:21:255,255,255,180,149,142,255,179,0,255
-chr21	20047228	chr21:20047228:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,14:31:176,0,196	0/0:31,2:35:0,67,255	0/1:17,19:38:236,0,200
-chr21	20047917	chr21:20047917:M	ACAACAACAACAACAACAACAA	<6.3>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:14,23:37:255,0,162	0/0:35,0:36:0,97,255	0/1:20,22:42:255,0,253
-chr21	20052105	chr21:20052105:M	TTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6,0:26:107,0,255,115,255,255	1/2:0,5,3:9:244,52,26,95,0,71	0/1:16,3,0:20:43,0,255,53,255,255
-chr21	20052179	chr21:20052179:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13:26:176,0,147	1/1:2,22:24:255,35,0	0/1:17,11:30:131,0,222
-chr21	20056199	chr21:20056199:M	GTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<8.8>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:1,25:26:255,58,0	1/1:0,24:24:255,71,0
-chr21	20060660	chr21:20060660:M	AAAAGAAAAGAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,30:31:255,91,0	1/1:1,23:24:255,52,0
-chr21	20069438	chr21:20069438:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:1,34:35:255,85,0	1/1:0,38:38:255,112,0
-chr21	20075680	chr21:20075680:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:2,26:28:255,47,0	1/1:3,27:31:255,37,0
-chr21	20083115	chr21:20083115:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:21:0,62,255	0/1:14,10:25:100,0,180	0/1:17,11:30:109,0,235
-chr21	20089392	chr21:20089392:M	AAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,60,0	1/1:0,11:14:255,41,0	1/1:0,15:17:255,51,0
-chr21	20105937	chr21:20105937:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,7:9:216,121,97,26,0,1	1/2:0,4,2:7:173,34,13,78,0,60	1/2:0,4,5:9:239,86,60,69,0,43
-chr21	20106411	chr21:20106411:M	TCATCATTATCATTATCAATCATCATCA	<11.3>	.	.	Motif=TCA	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,24:24:255,72,0	1/1:0,28:28:255,84,0
-chr21	20110850	chr21:20110850:M	TGTTTGTTTGTTTGTTTGTTT	<6.2>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,35:35:255,103,0	1/1:0,36:36:255,106,0
-chr21	20111612	chr21:20111612:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,19,5:26:255,95,24,255,0,255	1/2:0,10,10:20:255,167,109,167,0,110	2/2:0,1,20:22:255,255,255,62,44,0
-chr21	20115343	chr21:20115343:M	TTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:37:255,110,0	1/1:0,35:37:255,110,0	1/1:0,27:28:255,84,0
-chr21	20116311	chr21:20116311:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,35:37:255,105,0	1/1:0,47:50:255,146,0
-chr21	20119173	chr21:20119173:M	TTTTTTTTTTTTTTTATTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:29:255,67,0	1/1:2,21:23:255,33,0	1/1:1,21:26:255,57,0
-chr21	20127279	chr21:20127279:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,33:33:255,99,0	1/1:0,23:24:255,72,0
-chr21	20129453	chr21:20129453:M	TTCTTCTTCTTC	<3>	.	.	Motif=TTC	GT:AD:DP:PL	1/1:0,50:50:255,148,0	1/1:0,34:34:255,100,0	1/1:0,40:40:255,118,0
-chr21	20133811	chr21:20133811:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,21:25:255,54,0	1/1:1,16:19:255,38,0	1/1:1,25:28:255,64,0
-chr21	20134855	chr21:20134855:M	ACACGACACACACACACGCACACACACACACACACACACA	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,27:28:255,81,0	1/1:0,23:26:255,72,0
-chr21	20141171	chr21:20141171:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:221,24,0	0/1:1,4:6:91,0,36	1/1:0,4:4:110,12,0
-chr21	20142639	chr21:20142639:M	TTATTATTATTATTATTATTATTATTATTATTACTATTATT	<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10:10:190,30,0	1/1:0,6:7:117,20,0	1/1:0,11:11:204,32,0
-chr21	20154733	chr21:20154733:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:13:179,19,0	0/1:3,14:19:195,0,6	1/1:2,22:26:255,40,0
-chr21	20155732	chr21:20155732:M	CCCCCCCCCCCCC	<14>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:2,22:24:255,36,0	1/1:2,19:22:255,29,0
-chr21	20161968	chr21:20161968:M	TATATATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,28:33:255,78,0	1/1:0,19:21:255,62,0	1/1:1,35:37:255,91,0
-chr21	20162432	chr21:20162432:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:67,12,0	1/1:0,0:2:13,3,0	0/1:1,2:3:24,0,8
-chr21	20169966	chr21:20169966:M	ACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:2,29:31:255,57,0	1/1:0,22:22:255,64,0
-chr21	20173559	chr21:20173559:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,7:10:191,106,97,13,0,18	1/2:0,3,9:12:255,151,118,43,0,16	2/2:0,0,10:10:255,203,176,30,29,0
-chr21	20192660	chr21:20192660:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,20:22:255,65,0	1/1:0,32:38:255,102,0
-chr21	20197845	chr21:20197845:M	ACACAGACACACACACACACACACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,45,0	1/1:0,18:21:255,62,0	1/1:0,26:26:255,78,0
-chr21	20199490	chr21:20199490:M	TTTTTTTTTTTAATGTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,23:23:255,69,0	1/1:0,20:20:255,60,0
-chr21	20204340	chr21:20204340:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:3,46:50:255,94,0	1/1:3,38:43:255,71,0
-chr21	20216880	chr21:20216880:M	AGAGGAGAGAGAAAAAGAAGAGAGAAGAAAGAGGAGAGAGA	<6>	.	.	Motif=AG	GT:AD:DP:PL	0/1:23,5:28:35,0,255	0/1:26,9:35:127,0,255	0/0:33,4:37:0,13,255
-chr21	20222867	chr21:20222867:M	TTTTTCTTTTCTTTTTTTTTTTCTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:139,12,0	1/1:0,10:10:166,29,0	1/1:0,12:12:205,35,0
-chr21	20229545	chr21:20229545:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<12.6>,<13.6>,<14.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/3:0,7,0,4:11:226,110,89,190,76,179,133,0,132,179	2/3:0,0,4,4:8:219,180,168,72,71,49,72,61,0,49	1/2:0,6,5,0:11:231,93,61,95,0,80,204,79,111,243
-chr21	20230494	chr21:20230494:M	ACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:3,10,3,0:16:134,7,47,127,0,254,171,59,255,255	1/3:0,11,2,5:19:255,129,117,237,49,255,184,0,255,255	0/2:2,0,6,2:10:95,118,204,0,29,5,51,101,0,97
-chr21	20244101	chr21:20244101:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6,2:10:91,0,4,49,1,98	1/2:0,5,7:13:255,125,89,65,0,41	1/2:0,9,4:13:222,64,27,119,0,107
-chr21	20254488	chr21:20254488:M	AAAAAAGAAAAAAAAGAAAGAAAGAAAAAGAAAAAAGAAAAGAAAAAAAAAAGAAAAAA	<57>,<58>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,11:17:160,178,255,0,112,64	0/1:10,8,0:18:173,0,231,140,176,255	1/2:0,5,8:13:253,126,111,91,0,55
-chr21	20256071	chr21:20256071:M	ACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,9,0:18:255,156,104,150,0,99,255,156,150,255	1/3:1,9,0,6:17:255,148,154,255,180,255,232,0,148,236	2/2:0,0,21,0:21:255,255,255,63,61,0,255,255,63,255
-chr21	20262640	chr21:20262640:M	TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT	<14.3>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:7,0:7:0,21,124	0/1:3,5:8:68,0,31
-chr21	20274542	chr21:20274542:M	GGAAGGAGGGAAGGAAGGACGGAAGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	<18.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,6:6:110,18,0	1/1:0,5:5:87,15,0	.
-chr21	20274922	chr21:20274922:M	ACACACACACACACACACACACACACACATACACA	<14.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:15,0,19:36:255,255,255,0,255,249	0/2:21,0,13:36:196,255,255,0,255,255	0/1:20,21,0:44:255,0,255,255,255,255
-chr21	20280929	chr21:20280929:M	TATATATATATATAAAAATGTCTATATATATATATATA	<20>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,17:33:245,0,185	0/1:6,4:10:42,0,77	0/0:18,0:18:0,53,255
-chr21	20286018	chr21:20286018:M	TTTTTTTTTTTTTTTTTCTTTTT	<21>,<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:2,0,17,0:19:255,255,255,19,55,0,255,255,51,255	2/2:0,2,20,0:22:255,255,255,64,30,0,255,255,65,255	1/3:1,8,2,5:16:255,66,119,177,101,210,199,0,104,220
-chr21	20291667	chr21:20291667:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,0,1	0/0:0,0:4:0,4,16	1/1:0,3:3:89,9,0
-chr21	20293211	chr21:20293211:M	ACACACACACACACACACACACAC	<16>,<17>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,9:23:194,151,255,0,255,255	0/1:13,8,0:22:174,0,255,144,255,255	1/2:0,13,12:25:255,211,140,229,0,159
-chr21	20296069	chr21:20296069:M	AAAAAAAAAAAAAAGAAAGAAAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,7,8:21:255,172,185,80,0,189	1/2:1,14,8:26:255,209,172,228,0,255	1/2:0,16,13:29:255,255,255,255,0,255
-chr21	20300407	chr21:20300407:M	ATATATATATATATATATATATATATATA	<6.5>,<8>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,9:18:255,143,96,132,0,82	1/2:0,7,4:12:255,62,32,112,0,81	1/1:0,19,0:24:255,69,0,255,43,255
-chr21	20301970	chr21:20301970:M	AAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:14:218,0,22	0/1:2,10:15:239,0,23	0/1:2,13:16:255,0,18
-chr21	20305495	chr21:20305495:M	TTATTATTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:18,25:43:255,0,222	0/1:17,22:39:255,0,194	0/1:18,23:41:255,0,217
-chr21	20308330	chr21:20308330:M	ACACACACACACACACACACACACACACA	<13.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,21:21:255,255,255,62,63,0	0/2:15,2,6:23:39,70,255,0,188,223	1/2:1,16,7:25:255,110,135,255,0,255
-chr21	20308357	chr21:20308357:M	CATGCGTGCACGCATGCATGCA	<6.5>	.	.	Motif=CATG	GT:AD:DP:PL	1/1:0,23:24:255,68,0	1/1:0,18:18:255,53,0	0/1:19,11:32:106,0,255
-chr21	20315482	chr21:20315482:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:41:255,118,0	1/1:0,30:32:255,93,0	0/1:15,12:27:143,0,198
-chr21	20318169	chr21:20318169:M	TATATATATATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,1:12:2,0,224	0/1:8,6:16:130,0,161	0/0:37,0:39:0,116,255
-chr21	20318188	chr21:20318188:M	ATACACACACACACACATACATACATACATACATA	<9.2>,<10.2>,<10.8>	.	.	Motif=ATAC	GT:AD:DP:PL	1/3:0,3,0,19:22:255,255,255,190,164,148,26,0,35,4	1/3:0,8,1,9:20:241,173,150,120,69,143,57,0,107,133	0/2:6,0,18,9:33:255,255,255,0,49,38,77,116,34,138
-chr21	20324165	chr21:20324165:M	TTTTTTCTTTTTTCTTCTCTTTTTTTTTTTTTT	<32>,<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8,0:16:99,0,99,144,145,255	0/1:14,9,0:24:97,0,172,163,239,255	1/2:0,12,10:23:255,255,224,210,0,255
-chr21	20326468	chr21:20326468:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:8:17,0,52	0/0:7,0:9:0,24,128	0/1:7,3:10:22,0,89
-chr21	20336857	chr21:20336857:M	ACACACACACACACGTACACACACACACACACACACACACACACACACACACA	<21.5>,<24.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,9,0,9:18:255,159,255,255,159,255,255,0,255,242	1/2:0,10,7,0:18:255,213,201,255,0,255,255,118,255,255	2/3:0,0,8,6:14:255,255,255,87,104,63,139,140,0,98
-chr21	20340932	chr21:20340932:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,14:32:188,0,178	0/1:13,18:33:240,0,132	0/1:23,14:44:171,0,255
-chr21	20344582	chr21:20344582:M	TATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTAT	<6.6>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,20:20:255,60,0	1/1:0,23:25:255,75,0
-chr21	20345787	chr21:20345787:M	ACACACACACACACACACACACACACACA	<13.5>,<18.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/4:0,14,0,0,4:19:255,114,70,255,112,255,255,72,255,255,255,0,255,255,255	1/3:0,11,0,8,0:21:255,231,196,255,127,255,198,0,255,255,255,139,255,255,255	2/4:0,0,7,1,6:15:255,255,255,170,170,140,225,225,91,184,209,209,0,117,184
-chr21	20351847	chr21:20351847:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,4,13:32:148,163,255,0,163,229	2/2:1,0,27:29:255,255,255,67,84,0	0/1:16,14,0:30:167,0,203,251,245,255
-chr21	20353330	chr21:20353330:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:20:0,38,255	0/0:23,0:24:0,70,255	0/1:13,11:25:126,0,153
-chr21	20354998	chr21:20354998:M	CACACACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,16:31:224,0,200	1/1:0,36:36:255,106,0	0/0:40,0:40:0,118,255
-chr21	20360344	chr21:20360344:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:16:0,44,255	0/0:21,2:27:0,41,255	0/1:14,7:24:53,0,207
-chr21	20365894	chr21:20365894:M	TTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,17,0:18:255,35,0,255,54,255	1/1:0,16,0:21:255,57,0,255,59,255	1/2:2,10,8:22:255,169,191,133,0,255
-chr21	20367038	chr21:20367038:M	TTTTCTTTTCTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:44,2:47:0,101,255	0/0:37,1:38:0,94,255	0/1:18,19:37:241,0,220
-chr21	20367366	chr21:20367366:M	TTTTCTTTTTTCTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,35:35:255,103,0	1/1:0,39:39:255,115,0
-chr21	20371170	chr21:20371170:M	AAAAAAAAAAAAAAAAAA	<14>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27,0:28:255,81,0,255,81,255	1/1:0,32,0:33:255,99,0,255,99,255	1/2:0,17,11:31:255,193,228,255,0,255
-chr21	20374052	chr21:20374052:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:1,30:31:255,73,0	0/1:18,10:30:97,0,253
-chr21	20374840	chr21:20374840:M	AAAAAAAAAAAAAGAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,12:19:162,0,54	0/1:6,8:16:99,0,65	1/1:0,17:17:255,50,0
-chr21	20377229	chr21:20377229:M	ATATATATATATATATATATATATATATATATCATATATAGATATGGTATATATA	<28.5>,<30.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,6,0:11:81,0,34,99,64,255	0/0:0,0,0:1:0,3,12,3,13,14	2/2:0,0,3:5:118,105,100,15,12,0
-chr21	20377292	chr21:20377292:M	TCTATCTATCTATCCATCTATCTATCTATCTATCTATC	<8.5>	.	.	Motif=TCTA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,19:19:255,56,0	1/1:0,17:17:255,50,0
-chr21	20381138	chr21:20381138:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAACAAATA	<12.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,14:14:255,41,0	1/1:0,9:9:163,26,0	0/1:17,10:27:107,0,238
-chr21	20381646	chr21:20381646:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:219,30,0	1/1:1,7:10:103,1,0	1/1:1,9:11:153,14,0
-chr21	20391009	chr21:20391009:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:28:0,63,255	0/0:20,0:23:0,67,255	0/1:18,15:34:181,0,224
-chr21	20393082	chr21:20393082:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:24:255,45,0	1/1:2,19:22:255,11,0	0/1:21,8:30:138,0,255
-chr21	20396019	chr21:20396019:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,11:40:171,0,255	0/1:19,28:47:255,0,255	0/0:32,0:34:0,99,255
-chr21	20398635	chr21:20398635:M	ATATATATATATATATATA	<8.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,27:28:255,255,255,82,84,0	2/2:1,0,21:22:255,255,255,47,63,0	1/2:2,19,15:36:255,238,255,255,0,255
-chr21	20402917	chr21:20402917:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,49:51:255,113,0	1/1:4,37:41:255,49,0	1/1:1,43:44:255,111,0
-chr21	20405735	chr21:20405735:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,49:50:255,129,0	1/1:0,52:52:255,154,0
-chr21	20423055	chr21:20423055:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:34:255,98,0	1/1:4,23:29:255,16,0	1/1:1,22:26:255,58,0
-chr21	20430762	chr21:20430762:M	TATATATATACATATATATATATACACATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,10:22:39,0,243	0/0:0,0:1:0,0,0	0/1:5,3:8:8,0,103
-chr21	20430814	chr21:20430814:M	TATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,10:11:88,2,0	0/0:1,0:1:0,3,28	0/1:1,3:4:24,0,16
-chr21	20430941	chr21:20430941:M	ATATATAGTCATATATATGTAACATATATACTCATATATATAACATATATAGTCATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,10:26:47,0,255	0/0:8,0:9:0,24,213	0/0:16,3:20:0,21,255
-chr21	20435496	chr21:20435496:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:52,0,2	0/1:0,2:3:23,0,3	0/1:1,2:3:24,0,8
-chr21	20440482	chr21:20440482:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,22:35:255,0,133	1/1:0,30:32:255,93,0	0/1:15,16:31:192,0,175
-chr21	20441660	chr21:20441660:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,15:19:217,0,1	0/1:10,10:22:116,0,116	0/1:8,8:17:101,0,91
-chr21	20445754	chr21:20445754:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,12:22:158,0,96	0/1:15,9:25:79,0,190	0/1:11,9:22:103,0,137
-chr21	20449355	chr21:20449355:M	ACACACACACACACACACACACACACACACACACACATACAC	<17>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,9,15:24:255,208,139,127,0,56	1/2:0,12,10:25:255,137,64,194,0,125	1/2:0,7,20:28:255,255,198,90,0,18
-chr21	20449540	chr21:20449540:M	ATATATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,35:38:255,109,0	1/1:0,20:21:255,61,0	1/1:1,37:41:255,99,0
-chr21	20449926	chr21:20449926:M	TATATATACATATATATGTGTATATATATATATATGTGTATATATATATATATATATATATATATATA	<24>,<27>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,10:19:255,255,248,160,0,117	1/1:0,4,0:5:186,15,0,142,15,129	1/2:0,1,1:4:91,23,14,57,0,51
-chr21	20450745	chr21:20450745:M	AGAAAAAAAAAAAGAAAAAGAA	<3.5>	.	.	Motif=AGAAAA	GT:AD:DP:PL	1/1:1,30:32:255,71,0	1/1:0,28:28:255,84,0	1/1:0,39:39:255,116,0
-chr21	20454899	chr21:20454899:M	TTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:16:255,47,0	1/1:0,9:17:255,47,0	1/1:0,11:12:255,36,0
-chr21	20460618	chr21:20460618:M	ACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,2:4:97,12,0	1/1:0,3:5:116,14,0	1/1:0,9:11:255,33,0
-chr21	20460632	chr21:20460632:M	AGAGAGAGAGAGAGAGAGAGAAGAGAGAGAGAGAAGAGA	<22.5>,<23.5>,<24.5>	.	.	Motif=AG	GT:AD:DP:PL	1/3:0,4,2,4:11:253,97,69,89,28,60,107,0,39,85	2/3:0,1,4,4:10:243,144,120,62,47,33,61,27,0,33	1/2:0,8,5,0:18:255,55,14,126,0,101,255,51,144,255
-chr21	20465604	chr21:20465604:M	ATATATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,28:28:255,84,0	1/1:0,38:39:255,117,0	1/1:0,36:36:255,108,0
-chr21	20466933	chr21:20466933:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:32:255,94,0	0/1:17,17:34:202,0,201	1/1:0,30:30:255,88,0
-chr21	20468084	chr21:20468084:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:7,0,22	0/1:1,4:5:46,0,1	0/1:1,3:4:35,0,4
-chr21	20475867	chr21:20475867:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:16:240,0,84	0/1:3,9:14:200,0,48	0/1:2,5:10:119,0,35
-chr21	20476756	chr21:20476756:M	TTATTATTATTATTATTAT	<5.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,38:38:255,113,0	1/1:0,33:33:255,97,0	1/1:0,39:40:255,118,0
-chr21	20481093	chr21:20481093:M	TTTTTTTTTATTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,40:40:255,120,0	1/1:0,43:43:255,129,0
-chr21	20482033	chr21:20482033:M	TGTGTGTGTGTGTGTGTGT	<12.5>,<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,26,19,0:46:255,255,255,255,0,255,255,255,255,255	1/3:0,17,1,15:35:255,255,255,255,239,255,255,0,255,255	1/2:0,23,18,0:41:255,255,255,255,0,255,255,255,255,255
-chr21	20482533	chr21:20482533:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:2,25:28:255,48,0	0/1:10,10:23:121,0,112
-chr21	20487619	chr21:20487619:M	AAAAAAACAAAAACAAAAACAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,23:46:255,0,255	0/1:25,19:44:255,0,255	1/1:0,37:37:255,111,0
-chr21	20488919	chr21:20488919:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,28:33:255,41,0	1/1:0,41:42:255,123,0	1/1:0,42:43:255,127,0
-chr21	20489184	chr21:20489184:M	ATATATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,25:25:255,74,0	0/1:20,17:37:209,0,255
-chr21	20493740	chr21:20493740:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5:18:37,0,172	0/1:9,9:19:98,0,108	1/1:0,21:23:255,66,0
-chr21	20500999	chr21:20500999:M	TGTGGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,5:18:255,110,88,197,0,255	1/2:0,13,7:23:255,186,136,227,0,255	1/2:1,9,10:20:255,242,226,140,0,210
-chr21	20503564	chr21:20503564:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,21,17:38:255,255,211,255,0,255	1/2:1,15,17:33:255,238,219,247,0,171	1/2:2,22,15:39:255,200,185,255,0,255
-chr21	20508543	chr21:20508543:M	TTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTTT	<7.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:16,16:32:255,0,255	0/1:14,12:26:246,0,255	0/1:15,7:22:123,0,255
-chr21	20512491	chr21:20512491:M	AAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,11:26:140,155,255,0,229,178	0/2:26,1,26:54:255,255,255,0,255,255	0/1:13,20,0:33:255,0,255,255,231,255
-chr21	20535561	chr21:20535561:M	TTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,13:19:255,0,32	0/1:4,12:18:255,0,62	1/1:0,16:20:255,53,0
-chr21	20539643	chr21:20539643:M	CACACACACACACACACACACACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,17:39:196,0,255	0/1:14,25:40:255,0,136	0/1:24,18:43:197,0,255
-chr21	20553094	chr21:20553094:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,13,0,12:26:255,216,255,255,255,255,255,0,244,255	2/3:1,0,11,15:27:255,255,255,241,255,255,171,189,0,238	1/3:2,14,0,12:29:255,175,255,255,255,255,255,0,251,255
-chr21	20554292	chr21:20554292:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,30:31:255,89,0	1/1:0,11:15:189,25,0	0/1:5,16:21:225,0,28
-chr21	20560947	chr21:20560947:M	AAAAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:32:193,0,203	0/0:26,1:28:0,64,255	0/0:33,0:33:0,97,255
-chr21	20563377	chr21:20563377:M	GTTTTTTTGTTTGTTTGTTTTTGTTTGTTTGTTTTTTGTTTGTTT	<7.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/1:15,11:26:221,0,255	0/0:21,0:21:0,63,255
-chr21	20568009	chr21:20568009:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:19:34,0,196	0/1:16,4:20:10,0,215	0/1:15,3:23:17,0,219
-chr21	20572427	chr21:20572427:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:39:0,69,255	0/1:31,13:46:110,0,255	0/0:31,2:33:0,61,255
-chr21	20577323	chr21:20577323:M	AAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/1:12,10:25:207,0,255	0/0:17,0:23:0,67,255
-chr21	20579932	chr21:20579932:M	ACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:15,9:24:183,0,255	0/0:35,0:35:0,105,255
-chr21	20581354	chr21:20581354:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:39:0,115,255	0/1:25,23:51:255,0,255	0/0:32,0:37:0,110,255
-chr21	20584235	chr21:20584235:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,7:20:255,87,77,193,0,155	1/2:0,4,9:16:246,126,108,86,0,48	1/2:2,10,6:18:255,53,74,137,0,122
-chr21	20587000	chr21:20587000:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,15:16:255,44,0	1/1:0,2:2:37,6,0	1/1:0,14:14:255,41,0
-chr21	20587092	chr21:20587092:M	ACACACACACACACACACACACACACACACACACAC	<15>,<16>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,3,3:7:157,49,31,49,0,31	1/1:0,5,0:6:151,16,0,95,15,80	1/2:0,0,4:6:125,64,47,21,0,7
-chr21	20587129	chr21:20587129:M	TATATATATATATATATATATA	<9>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,5,4:11:149,46,31,113,0,122	2/2:0,0,1:1:14,14,14,3,3,0	1/1:0,7,1:10:189,24,0,195,13,235
-chr21	20587199	chr21:20587199:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,10:25:92,0,158	1/1:1,12:13:171,22,0	0/1:13,9:22:80,0,144
-chr21	20587266	chr21:20587266:M	TATATATATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,10:20:255,0,110	0/0:5,0:6:0,15,153	0/1:3,10:15:255,0,60
-chr21	20587529	chr21:20587529:M	TATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,9:29:26,0,255	0/0:19,2:21:0,38,255	0/0:14,1:15:0,33,255
-chr21	20587560	chr21:20587560:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,10:20:131,0,112	1/1:0,10:10:177,29,0	0/1:9,6:15:65,0,120
-chr21	20587665	chr21:20587665:M	TATATATATATATATATATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:9:121,25,0	1/1:0,2:2:27,6,0	1/1:0,1:2:13,3,0
-chr21	20587710	chr21:20587710:M	GTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,2:6:19,0,57	0/0:5,0:5:0,15,88	1/1:0,5:5:88,15,0
-chr21	20587723	chr21:20587723:M	TATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,9:17:62,0,178	0/1:5,2:7:4,0,121	0/0:6,1:7:0,9,158
-chr21	20587746	chr21:20587746:M	GTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,2:2:83,6,0	1/1:0,1:3:71,9,0	1/1:0,5:5:209,15,0
-chr21	20587767	chr21:20587767:M	TATATATATATATATATATATATATATATATATGTATATGTATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:9:126,26,0	1/1:0,2:3:28,6,0	1/1:0,1:1:14,3,0
-chr21	20587849	chr21:20587849:M	TATATATAGATATATATATCTATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,9:19:54,0,221	0/1:6,2:8:0,0,142	0/0:6,1:7:0,9,155
-chr21	20587901	chr21:20587901:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,9:16:57,0,146	0/0:9,1:10:0,18,236	0/0:7,1:8:0,13,215
-chr21	20587923	chr21:20587923:M	TATAATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,9:14:69,0,100	0/0:7,1:8:0,12,184	0/0:7,0:7:0,21,199
-chr21	20587966	chr21:20587966:M	TATATATATATATATATATATATATATATATA	<13>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,1,9:12:189,101,92,89,0,65	2/2:0,0,1:1:14,14,14,3,3,0	1/1:0,3,0:4:117,12,0,118,12,120
-chr21	20587997	chr21:20587997:M	ACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,5:13:110,0,129	1/1:0,9:10:252,30,0	0/0:9,1:10:0,3,217
-chr21	20588087	chr21:20588087:M	TATATATATATATATATA	<16>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:9:133,133,133,26,26,0	2/2:0,0,1:1:15,15,15,3,3,0	1/1:0,3,0:4:99,6,0,100,9,103
-chr21	20588119	chr21:20588119:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,9:21:50,0,255	0/0:5,1:6:0,6,131	0/0:27,0:28:0,84,255
-chr21	20588145	chr21:20588145:M	TATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,9:22:47,0,255	0/0:6,1:7:0,9,159	0/0:32,0:32:0,96,255
-chr21	20588236	chr21:20588236:M	ATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,9:17:62,0,179	0/0:5,1:6:0,6,127	0/0:20,0:20:0,60,255
-chr21	20588446	chr21:20588446:M	TATATATACATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:12,6:18:20,0,255	0/0:15,1:16:0,36,255	0/0:21,0:21:0,63,255
-chr21	20588518	chr21:20588518:M	TATATATATATATATATATATA	<16>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,6:12:187,58,40,129,0,113	2/2:0,0,1:1:12,12,12,3,3,0	1/1:0,3,0:4:98,12,0,98,12,98
-chr21	20600172	chr21:20600172:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,16:24:233,0,39	1/1:0,16:17:255,49,0	0/1:9,20:29:255,0,73
-chr21	20600593	chr21:20600593:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,20:32:255,0,133	1/1:0,23:23:255,68,0	0/1:20,17:39:219,0,255
-chr21	20603452	chr21:20603452:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTCTTTTCTTTTCTTTTCTCTTCTTTT	<7.6>,<9.6>,<12.6>,<13.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/2:0,8,8,0,0:16:255,226,200,222,0,195,255,226,222,255,255,226,222,255,255	2/3:0,0,12,4,0:16:255,255,255,115,115,79,255,255,0,255,255,255,72,255,255	1/4:0,13,0,0,5:18:255,142,103,255,142,255,255,94,255,255,255,0,255,255,255
-chr21	20606508	chr21:20606508:M	GAGAGAGAGAGAGAGAGAGAGA	<12>	.	.	Motif=GA	GT:AD:DP:PL	0/0:35,0:37:0,106,255	0/1:11,8:20:85,0,148	0/1:19,18:37:225,0,243
-chr21	20616707	chr21:20616707:M	ATATACATATATGTATATGTATAATATGTATTTATATATAT	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,1:19:0,3,255	0/1:10,5:16:182,0,227	0/1:15,4:19:127,0,255
-chr21	20633056	chr21:20633056:M	ACACACACACAAACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:44,0:44:0,122,255	0/1:24,25:49:173,0,160	0/0:28,0:28:0,78,255
-chr21	20637098	chr21:20637098:M	AATAATAATAATAATAAATAAATAAATAAATAATAAT	<14>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:24,0:25:0,75,255	0/1:8,7:15:143,0,170	0/0:17,0:18:0,54,255
-chr21	20641025	chr21:20641025:M	AAAAAAAAAAAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:58,6,0	0/1:2,1:4:31,0,45	0/1:2,4:6:95,0,42
-chr21	20656183	chr21:20656183:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:7:74,4,0	0/1:3,1:5:2,0,42	0/1:1,3:4:36,0,4
-chr21	20657799	chr21:20657799:M	ATATATATATATATATATATATATATATATAT	<14>	.	.	Motif=AT	GT:AD:DP:PL	0/1:4,4:11:95,0,45	0/1:3,2:6:42,0,40	1/1:1,5:10:110,4,0
-chr21	20660697	chr21:20660697:M	ATCAGTCAATCAATCAAT	<3.8>	.	.	Motif=ATCA	GT:AD:DP:PL	0/1:16,13:29:248,0,255	0/1:15,17:32:255,0,255	1/1:0,25:25:255,75,0
-chr21	20681652	chr21:20681652:M	TTTTTGTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:159,0,196	0/1:12,18:30:228,0,123	1/1:1,29:32:255,75,0
-chr21	20683532	chr21:20683532:M	AAAAAAAAAAAAAAAAAAAGAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,1:6:10,16,80,0,77,107	0/2:1,1,3:7:68,35,46,0,12,25	1/2:0,3,1:4:67,17,5,42,0,39
-chr21	20686872	chr21:20686872:M	ACACACACACACACACACACACACACACACACACACACACA	<22.5>,<23.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:1,3,0,3:8:128,56,73,101,81,128,51,0,60,87	1/2:0,1,4,0:7:133,56,42,16,0,21,133,62,38,155	1/3:0,1,0,5:8:176,148,144,148,132,147,27,0,24,23
-chr21	20694434	chr21:20694434:M	AAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:96,0,8	0/1:2,3:7:83,0,32	1/1:0,5:5:131,15,0
-chr21	20694494	chr21:20694494:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,13:34:51,0,137	0/1:16,18:34:103,0,82	0/1:13,21:34:137,0,51
-chr21	20700747	chr21:20700747:M	TATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,33:37:255,69,0	1/1:0,37:39:255,114,0	1/1:2,50:55:255,125,0
-chr21	20701603	chr21:20701603:M	CCCCCCACCCCCCCCACCCCCCCC	<27>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,3:3:80,9,0	0/1:4,2:6:33,0,82	0/1:5,2:7:32,0,107
-chr21	20701939	chr21:20701939:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:35:255,84,0	0/1:6,11:19:154,0,50	0/1:12,17:30:216,0,137
-chr21	20726922	chr21:20726922:M	AAAATAAAAAAAATA	<3.2>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:22,20:42:255,0,255	0/0:45,0:45:0,135,255	0/1:19,14:33:253,0,255
-chr21	20732932	chr21:20732932:M	AATAATAATAATAATAATAATAAT	<10>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:17,8:26:157,0,255	0/0:32,0:32:0,96,255	0/1:21,14:35:255,0,255
-chr21	20740961	chr21:20740961:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,21:42:255,0,255	1/1:0,33:33:255,97,0	0/0:36,2:40:0,80,255
-chr21	20741363	chr21:20741363:M	TGTTTGGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTG	<7.8>,<8.8>	.	.	Motif=TGTT	GT:AD:DP:PL	1/2:0,13,21:34:255,255,255,249,0,153	1/1:0,42,0:42:255,126,0,255,124,255	2/2:0,0,31:31:255,255,255,92,92,0
-chr21	20742184	chr21:20742184:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:37:214,0,255	0/0:31,0:31:0,91,255	0/1:17,28:46:255,0,190
-chr21	20742455	chr21:20742455:M	ATATATATATTATATATATATATATATATAATATATATATATAT	<20>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:10:198,23,0	.	0/1:1,6:7:139,0,7
-chr21	20744350	chr21:20744350:M	TATATATATATTTTATATATATATATAAAGTATGTATATATA	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,11:18:123,0,57	.	0/0:9,0:9:0,26,138
-chr21	20747431	chr21:20747431:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,10:21:255,158,125,199,0,142	2/2:1,2,16:19:255,238,255,38,20,0	0/1:11,14,1:27:255,0,238,242,180,255
-chr21	20750918	chr21:20750918:M	ACACACACACACACACACACACACACACGCACACACACACACAC	<8>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,13:28:255,255,255,255,0,255	2/2:0,0,22:23:255,255,255,69,69,0	0/1:8,13,0:22:255,0,173,255,212,255
-chr21	20758029	chr21:20758029:M	ACACACACATACACACACACACACACACACACACACACACACAC	<21>,<23>,<26>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,2:7:131,145,190,55,56,41,89,136,0,133	2/2:1,0,6,0:7:86,105,176,3,18,0,106,183,21,197	1/3:1,8,0,6:17:255,149,137,255,164,255,141,0,255,255
-chr21	20758579	chr21:20758579:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:36:255,106,0	1/1:1,32:34:255,82,0	0/1:20,17:38:197,0,255
-chr21	20771559	chr21:20771559:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:18:77,0,151	0/0:23,1:25:0,56,255	0/1:15,13:29:150,0,196
-chr21	20772669	chr21:20772669:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,8,1:11:117,13,0,96,14,117	1/1:0,16,0:16:234,46,0,234,46,234	0/2:12,0,11:23:220,159,255,0,174,245
-chr21	20776876	chr21:20776876:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,14:27:255,219,180,235,0,160	2/2:1,1,26:28:255,255,255,64,64,0	0/1:11,17,0:28:255,0,236,255,195,255
-chr21	20787783	chr21:20787783:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,7:20:255,111,72,240,0,185	2/2:0,0,33:33:255,255,255,97,97,0	0/1:14,23,0:37:255,0,255,255,249,255
-chr21	20791347	chr21:20791347:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:30,16:46:175,0,255	0/0:41,0:41:0,121,255	0/1:22,32:54:255,0,255
-chr21	20793091	chr21:20793091:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,4:17:22,0,184	0/1:2,9:11:122,0,2	0/0:14,0:18:0,52,255
-chr21	20813660	chr21:20813660:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,5:39:0,24,255	0/1:28,7:36:26,0,255	0/1:16,16:34:205,0,186
-chr21	20815942	chr21:20815942:M	TGTTTTTGTTGTTGTTGTTGTTGTTTTTGTTTTTGTTTTTGTT	<6.7>	.	.	Motif=TGTTGT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,29:30:255,89,0	1/1:0,23:25:255,73,0
-chr21	20816929	chr21:20816929:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:8:120,36,31,43,0,59	2/2:0,0,2:3:82,59,51,9,9,0	1/2:1,2,2:6:50,7,20,2,0,33
-chr21	20818381	chr21:20818381:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,25:43:255,0,212	0/0:27,1:29:0,67,255	1/1:2,35:38:255,76,0
-chr21	20824260	chr21:20824260:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,57,0	1/1:0,20:24:255,63,0	0/1:17,10:29:201,0,255
-chr21	20826712	chr21:20826712:M	ATATATATATATATATATATATATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:18:255,8,0	0/1:0,0:3:1,0,12	1/1:0,5:7:161,20,0
-chr21	20833099	chr21:20833099:M	AACAACAACAACAACAACAACAACAACAACAACAACAACAA	<11.7>,<12.7>	.	.	Motif=AAC	GT:AD:DP:PL	2/2:0,1,21:22:255,255,255,65,46,0	2/2:0,1,27:28:255,255,255,82,64,0	1/2:0,13,9:22:255,144,105,241,0,180
-chr21	20837778	chr21:20837778:M	TTTTCTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,1:7:0,2,88	0/1:2,4:7:64,0,13	0/0:5,0:6:0,2,72
-chr21	20845702	chr21:20845702:M	TCTTTCTTTCTTTTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTCT	<11.8>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:11,6:17:69,0,169	1/1:0,17:17:255,50,0	0/0:9,0:9:0,27,179
-chr21	20868827	chr21:20868827:M	CACACACACACACACACACAC	<9.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,17:31:233,0,176	1/1:1,41:42:255,106,0	0/0:53,1:54:0,141,255
-chr21	20872700	chr21:20872700:M	TTATTATTATTATTATTATTATTATTATTATTATTA	<14>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:13,10:24:205,0,255	0/0:7,0:7:0,21,192	1/1:0,13:13:255,39,0
-chr21	20874947	chr21:20874947:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,19:37:255,0,209	1/1:1,34:38:255,93,0	0/1:18,16:34:191,0,228
-chr21	20896785	chr21:20896785:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAGTGTGTGTGTGT	<12.5>,<14.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/3:6,1,0,9:16:95,115,255,137,255,255,0,70,92,49	2/3:0,0,3,3:10:90,100,137,35,73,64,58,66,0,58	0/1:6,4,0,0:10:72,0,130,88,142,227,89,89,176,162
-chr21	20899471	chr21:20899471:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGT	<21>,<23>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,10,0:26:255,141,220,210,0,255,255,255,255,255	1/3:0,4,0,4:8:165,111,99,172,107,204,65,0,103,94	2/2:1,0,13,0:15:205,246,255,24,42,0,246,255,45,255
-chr21	20899973	chr21:20899973:M	GTGTGTGGGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,13:29:165,0,222	0/0:35,0:35:0,103,255	1/1:0,46:46:255,136,0
-chr21	20902031	chr21:20902031:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:24:110,0,184	0/1:10,16:29:201,0,100	1/1:2,18:21:255,26,0
-chr21	20905429	chr21:20905429:M	TATATATATATATATATATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,6:17:64,0,157	0/0:2,0:2:0,6,36	1/1:0,10:10:187,30,0
-chr21	20906537	chr21:20906537:M	AAAAAAACAGAAAAAAAAAAAAAAAAAGAAAAAAA	<34>,<36>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,3:12:122,47,66,84,0,133	0/2:5,1,4:11:50,62,169,0,55,66	1/1:1,19,0:20:255,41,0,255,57,255
-chr21	20908692	chr21:20908692:M	AAAAAAAAAAAAA	<14>,<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,1,9,6:16:255,255,255,158,142,129,233,143,0,224	1/3:0,9,0,4:14:248,117,91,245,115,243,155,0,155,238	2/2:0,1,24,0:25:255,255,255,72,56,0,255,255,75,255
-chr21	20914534	chr21:20914534:M	AAAAAAAAAGAAAAAGAAAAAAAAA	<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16,0:30:215,0,177,255,255,255	0/2:16,0,15:31:255,255,255,0,255,255	1/1:0,27,0:27:255,80,0,255,80,255
-chr21	20918816	chr21:20918816:M	GAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAA	<7.4>,<12.2>,<13.4>	.	.	Motif=GAAAA	GT:AD:DP:PL	2/3:0,0,6,2:8:218,218,218,54,54,34,159,159,0,150	1/2:0,9,4,0:14:255,109,79,253,0,241,255,105,253,255	3/3:0,0,0,10:10:255,255,255,255,255,255,30,30,30,0
-chr21	20926550	chr21:20926550:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,15,0:29:255,0,255,255,225,255	0/2:15,0,9:25:86,156,255,0,255,203	1/1:0,42,0:45:255,134,0,255,134,255
-chr21	20937991	chr21:20937991:M	ACACACGCACACACACACACACACACACACACGCACACAC	<17>,<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	2/3:1,0,14,13:28:255,255,255,226,245,163,205,255,0,189	1/2:0,19,8,0:28:255,141,227,255,0,255,255,141,255,255	3/3:0,0,0,23:23:255,255,255,255,255,255,69,69,68,0
-chr21	20945365	chr21:20945365:M	AATAATAATAAT	<3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:17,20:37:255,0,220	0/0:40,0:40:0,118,255	1/1:0,44:44:255,130,0
-chr21	20948462	chr21:20948462:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,11:23:236,0,208	0/0:19,0:20:0,57,255	1/1:0,26:29:255,83,0
-chr21	20955178	chr21:20955178:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,10:17:128,0,46	0/0:15,2:24:0,30,255	0/1:1,4:5:54,0,2
-chr21	20971844	chr21:20971844:M	AAAAAAAAACAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:24,11:39:208,0,255	0/0:37,0:38:0,114,255
-chr21	20972116	chr21:20972116:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,28:47:255,0,189	1/1:1,44:46:255,117,0	0/0:36,3:39:0,60,255
-chr21	20975051	chr21:20975051:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:7:0,21,125	0/1:6,5:12:60,0,67	0/0:7,0:7:0,21,122
-chr21	20975221	chr21:20975221:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:12,0,92	0/1:1,3:6:64,0,21	0/0:7,0:7:0,21,190
-chr21	20975464	chr21:20975464:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:129,15,0	1/1:0,2:3:73,9,0	.
-chr21	20976561	chr21:20976561:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,3:30:0,33,255	0/1:7,14:22:187,0,57	0/1:10,11:22:132,0,123
-chr21	20978900	chr21:20978900:M	TTTTTTTTATTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,20:27:255,0,51	0/1:12,9:22:104,0,147	0/0:22,0:23:0,67,255
-chr21	20981661	chr21:20981661:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,10,17:30:255,255,255,255,0,224	1/2:0,18,13:32:255,223,255,255,0,255	2/2:0,0,24:25:255,255,255,73,72,0
-chr21	20982238	chr21:20982238:M	TATATATATATATATATATATA	<20.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,3:7:108,36,24,73,0,64	.	1/1:0,4,0:4:119,12,0,119,12,119
-chr21	20984522	chr21:20984522:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:0,29:30:255,88,0	1/1:0,42:42:255,124,0
-chr21	20986545	chr21:20986545:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	0/1:3,3:7:31,0,32	1/1:0,0:1:11,3,0
-chr21	20992105	chr21:20992105:M	TTTAGTTTTATTTTTCTATTTTTTTTTTTTTTA	<5.3>	.	.	Motif=TTTATT	GT:AD:DP:PL	1/1:0,10:10:132,28,0	1/1:1,11:12:132,20,0	1/1:1,37:40:255,98,0
-chr21	20995361	chr21:20995361:M	CTCTCTCTCTCTCTCTTATCTTCCCTCTGTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTC	<29.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:11,7:18:42,0,95	0/1:10,3:13:2,0,92	0/0:14,3:17:0,9,144
-chr21	20995623	chr21:20995623:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:13:233,38,0	1/1:1,11:12:170,18,0	1/1:1,16:17:255,32,0
-chr21	20996106	chr21:20996106:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<20>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/4:0,7,0,0,5:12:255,141,123,255,144,255,255,144,255,255,202,0,197,202,187	1/2:0,9,13,0,0:25:255,255,255,255,0,207,255,255,254,255,255,255,255,255,255	3/4:0,0,0,7,3:10:181,203,255,202,255,255,82,85,85,63,121,198,193,0,189
-chr21	21009884	chr21:21009884:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,10,0:22:239,0,255,255,255,255	1/2:0,13,8:23:255,218,174,255,0,255	0/0:14,0,0:16:0,42,255,42,255,255
-chr21	21011155	chr21:21011155:M	TTTTTTTTTCTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,0:38:0,112,255	0/1:12,25:38:255,0,105	0/1:26,16:42:174,0,255
-chr21	21013782	chr21:21013782:M	AAAAAAAAAAAAAGAAAATAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0,0:30:0,90,255,87,255,255	0/2:7,0,11:20:255,193,255,0,190,152	0/1:8,16,0:26:255,0,167,255,214,255
-chr21	21014424	chr21:21014424:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:18:0,35,255	0/1:8,4:13:30,0,108	0/0:13,0:16:0,43,243
-chr21	21026626	chr21:21026626:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,62,0	0/1:23,13:39:130,0,255	0/1:12,11:23:120,0,137
-chr21	21026856	chr21:21026856:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:14:0,11,112	1/1:2,8:13:77,5,0	0/0:6,0:7:0,19,85
-chr21	21031810	chr21:21031810:M	ACACACACACACACACACACTCACACACAC	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	0/2:22,0,22:44:255,255,255,0,255,255	1/2:0,14,28:42:255,255,255,255,0,133	0/0:33,1,1:35:0,69,255,70,255,255
-chr21	21032929	chr21:21032929:M	TTTCTTTCTTTCTTTCTTT	<1.5>,<2.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,7,0:7:184,21,0,148,21,132	1/2:0,12,9:21:255,160,101,209,0,152	2/2:0,0,16:16:255,255,255,48,47,0
-chr21	21032945	chr21:21032945:M	TTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:9:174,128,116,58,0,127	.	1/2:0,2,3:7:124,79,67,57,0,107
-chr21	21043851	chr21:21043851:M	AAAAAAAAAAAAAAAAAGAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:164,29,0	0/1:2,10:14:135,0,3	1/1:2,18:20:255,24,0
-chr21	21044036	chr21:21044036:M	TGTGTGTGTGTGTGTG	<9>,<10>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,7:23:255,132,66,255,0,239	1/2:0,19,12:31:255,214,125,255,0,251	1/1:1,40,0:41:255,102,0,255,121,255
-chr21	21049014	chr21:21049014:M	TTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,2:11:255,36,4,163,0,132	1/1:0,10,0:11:255,30,0,203,32,185	1/2:0,5,5:11:255,97,68,88,0,57
-chr21	21049872	chr21:21049872:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,17:42:202,0,255	0/0:45,0:46:0,135,255	0/1:23,20:44:241,0,255
-chr21	21050137	chr21:21050137:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:41:224,0,255	0/0:38,2:40:0,83,255	0/1:18,16:36:181,0,226
-chr21	21051263	chr21:21051263:M	AGCTAGCTAGC	<1.8>	.	.	Motif=AGCT	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:21,21:42:255,0,255	1/1:0,52:52:255,154,0
-chr21	21052151	chr21:21052151:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,3:3:91,91,91,9,9,0	2/2:0,0,1:2:28,30,41,3,6,0	1/1:0,4,0:5:141,15,0,137,15,134
-chr21	21053945	chr21:21053945:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,58:59:255,155,0	1/1:0,43:43:255,127,0	1/1:0,48:48:255,142,0
-chr21	21056491	chr21:21056491:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<20>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,14,6,0:20:255,103,121,242,0,255,255,163,255,255	1/1:0,8,0,0:8:134,23,0,156,24,233,157,24,239,247	2/3:0,0,12,6:21:255,255,255,180,181,135,209,255,0,255
-chr21	21056528	chr21:21056528:M	GAGAGAGGGGGAGAGAGAGGAGAGAGAGAGAGAGTGAGAGAGAGAGATAGTGAGAGAGAGAGA	<30.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:2,8:10:80,2,0	1/1:0,8:8:104,22,0	0/0:9,0:9:0,25,118
-chr21	21058145	chr21:21058145:M	AAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:26:255,78,0	1/1:0,11:18:255,41,0	1/1:0,19:21:255,60,0
-chr21	21058670	chr21:21058670:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,27:30:255,52,0	0/1:13,14:31:171,0,153	1/1:4,34:39:255,35,0
-chr21	21063211	chr21:21063211:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,14:17:255,49,0	0/0:0,0:1:0,0,0
-chr21	21066418	chr21:21066418:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:20,16:36:183,0,255	0/0:33,0:34:0,100,255
-chr21	21068127	chr21:21068127:M	TTTTTTTTCTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:8:137,23,0	0/1:3,4:8:53,0,26	1/1:0,10:11:179,32,0
-chr21	21068459	chr21:21068459:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:10:147,0,27	0/1:5,7:14:155,0,94	0/0:10,0:11:0,30,255
-chr21	21070268	chr21:21070268:M	TATATATATATATATATATA	<9>,<11>	.	.	Motif=TA	GT:AD:DP:PL	0/1:6,19,1:26:255,0,47,255,78,255	1/2:0,15,7:23:255,137,189,255,0,255	0/0:31,0,0:31:0,91,255,91,255,255
-chr21	21071871	chr21:21071871:M	CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11>	.	.	Motif=CTAT	GT:AD:DP:PL	0/1:13,13:27:255,0,255	1/1:0,20:21:255,63,0	0/1:11,9:20:188,0,244
-chr21	21076117	chr21:21076117:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,7:23:134,0,255	0/1:12,9:23:175,0,255	0/0:29,0:29:0,87,255
-chr21	21080615	chr21:21080615:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:24:96,0,198	0/1:12,9:21:96,0,148	0/0:26,0:26:0,77,255
-chr21	21080657	chr21:21080657:M	AAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:143,13,0	0/1:1,2:3:45,0,17	0/0:4,0:5:0,15,149
-chr21	21081863	chr21:21081863:M	AAACAAACAAACA	<2.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:22,29:51:255,0,255	1/1:0,60:60:255,177,0	0/0:35,0:35:0,103,255
-chr21	21082226	chr21:21082226:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:13:103,0,146	1/1:0,3:4:97,12,0	0/0:17,0:20:0,59,255
-chr21	21082277	chr21:21082277:M	AAAACAAAAAAAAAAAAACAAAACAAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,4:14:227,101,90,109,0,193	2/2:0,0,12:13:255,255,255,39,36,0	1/1:2,20,0:22:255,29,0,255,65,255
-chr21	21085202	chr21:21085202:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:45:252,0,255	1/1:1,34:36:255,88,0	0/0:46,0:47:0,138,255
-chr21	21088971	chr21:21088971:M	AAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,15:26:255,0,211	1/1:0,19:21:255,62,0	0/0:37,0:38:0,114,255
-chr21	21106315	chr21:21106315:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:14:208,24,0	.	1/1:1,24:28:255,64,0
-chr21	21114827	chr21:21114827:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:40:255,117,0	1/1:2,27:30:255,52,0	1/1:1,38:40:255,100,0
-chr21	21115958	chr21:21115958:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTTTCATGCTGAGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<37.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,1:7:44,6,0	1/1:0,7:14:204,21,0	0/0:0,0:6:0,0,0
-chr21	21123400	chr21:21123400:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,25:28:255,46,0	1/1:2,27:30:255,53,0	1/1:1,40:41:255,103,0
-chr21	21125715	chr21:21125715:M	AGAGAGAGAGAGA	<10.5>,<11.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,6,21:27:255,255,205,85,0,4	1/2:0,4,10:14:255,132,91,55,0,13	2/2:0,4,19:23:255,255,199,69,12,0
-chr21	21128245	chr21:21128245:M	TTTTTTTTTTTTCTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,34:35:255,102,0	1/1:1,37:39:255,96,0
-chr21	21134065	chr21:21134065:M	TTTTTTTTTTTTTTTTT	<14>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	3/3:1,0,0,20:21:255,255,255,255,255,255,44,63,62,0	1/3:1,10,1,16:29:255,255,255,255,255,255,255,0,166,224	2/3:1,0,7,5:13:244,196,248,58,98,64,107,106,0,88
-chr21	21134711	chr21:21134711:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,32:33:255,255,255,79,97,0	1/2:0,18,10:30:255,151,93,255,0,255	2/2:1,0,19:20:255,255,255,41,59,0
-chr21	21135080	chr21:21135080:M	AAAAAAAAAAAAAAAAA	<12>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,4:10:56,82,235,0,82,56	0/1:6,7,1:14:174,0,146,177,87,255	0/2:11,0,7:20:79,134,255,0,207,154
-chr21	21135246	chr21:21135246:M	AAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5,0:5:144,15,0,104,15,91	1/2:0,1,7:10:205,114,91,18,0,13	1/2:0,5,1:6:161,18,0,88,0,71
-chr21	21136465	chr21:21136465:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:24:0,71,255	0/1:12,19:33:255,0,233	0/0:15,0:18:0,44,255
-chr21	21136902	chr21:21136902:M	TTTTTTTTTTTT	<11>,<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,29,19:51:255,255,255,255,255,220,255,255,0,255	1/3:2,16,1,20:41:255,255,255,255,255,255,255,0,255,255	2/3:1,0,18,19:41:255,255,255,255,255,255,255,255,0,223
-chr21	21142366	chr21:21142366:M	TTTTTTTTTATGTTTTTTTTTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,2:6:72,17,18,26,0,46	1/2:1,6,2:9:113,17,7,66,0,83	1/2:0,5,3:8:146,51,28,71,0,62
-chr21	21143805	chr21:21143805:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,1,19:37:255,255,255,0,233,255	1/2:1,10,11:23:255,186,140,130,0,119	0/2:13,4,13:35:255,171,255,0,190,255
-chr21	21144345	chr21:21144345:M	AAAAAGAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,18:26:255,0,73	0/1:14,25:41:255,0,137	0/1:17,9:27:94,0,231
-chr21	21146547	chr21:21146547:M	ATATATATATGTATATATATATATATAT	<11>,<13>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,7,11:19:255,202,255,241,0,194	1/2:0,4,1:5:128,17,18,108,0,102	1/2:0,10,2:13:255,37,20,255,0,255
-chr21	21147706	chr21:21147706:M	ATATTATATACTATATATAATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,6:23:107,0,255	0/0:10,0:10:0,30,255	0/1:14,13:27:255,0,255
-chr21	21150978	chr21:21150978:M	ATATATATATAT	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,117,0	0/1:18,27:45:255,0,255	1/1:0,50:50:255,149,0
-chr21	21156569	chr21:21156569:M	ATAGATAGATTATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<13.5>,<14.5>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:8,12,0:20:160,0,87,184,143,255	0/0:29,1,0:31:0,71,255,87,255,255	1/2:0,6,6:14:236,105,72,89,0,71
-chr21	21158613	chr21:21158613:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,22:23:255,42,0	1/1:0,13:15:255,44,0	1/1:0,21:22:255,66,0
-chr21	21161562	chr21:21161562:M	TGTGTGTGTGTGTGTGTGTATGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,40:42:255,123,0	1/1:1,42:44:255,111,0	1/1:1,40:41:255,103,0
-chr21	21175533	chr21:21175533:M	AAAAAAAATAAAAAAAAATAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:28:0,76,255	0/0:27,0:27:0,79,255	0/1:15,14:31:157,0,175
-chr21	21198185	chr21:21198185:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,14:30:255,255,255,255,0,255	1/2:0,16,6:23:255,159,105,255,0,255	1/2:0,12,15:30:255,255,255,255,0,255
-chr21	21200410	chr21:21200410:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:17:240,22,0	0/1:5,14:20:180,0,37	1/1:3,21:25:255,20,0
-chr21	21200752	chr21:21200752:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:80,9,0	0/1:1,1:2:21,0,21	0/1:0,0:2:0,0,0
-chr21	21210968	chr21:21210968:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<20>,<21>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,24:26:255,255,255,75,64,0	1/2:0,11,10:23:255,167,100,204,0,142	2/2:0,2,18:20:255,255,255,60,24,0
-chr21	21212743	chr21:21212743:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:90,15,0	0/1:2,9:11:123,0,2	1/1:0,6:6:106,18,0
-chr21	21215733	chr21:21215733:M	AAATAAATAAATAAA	<2.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,37:37:255,109,0	1/1:0,30:30:255,88,0	1/1:0,29:29:255,86,0
-chr21	21236757	chr21:21236757:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,35:37:255,110,0	1/1:0,23:23:255,69,0	1/1:0,40:40:255,120,0
-chr21	21237950	chr21:21237950:M	TTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,17:20:255,60,0	1/1:0,23:26:255,78,0
-chr21	21251745	chr21:21251745:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,75,0	1/1:0,37:42:255,115,0	1/1:0,30:41:255,101,0
-chr21	21254899	chr21:21254899:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,25:28:255,79,0	1/1:0,23:25:255,73,0	1/1:0,32:33:255,97,0
-chr21	21254950	chr21:21254950:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,29:30:255,90,0	1/1:0,40:41:255,123,0
-chr21	21259920	chr21:21259920:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,14:15:255,42,0	1/1:0,16:16:255,48,0	1/1:0,18:18:255,54,0
-chr21	21260565	chr21:21260565:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,43:46:255,98,0	1/1:0,41:41:255,121,0	1/1:2,38:42:255,86,0
-chr21	21264743	chr21:21264743:M	TATATATATACATATATATATATTCCACTATATATATACATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,18:30:255,0,211	1/1:0,21:21:255,63,0	0/1:11,19:30:255,0,209
-chr21	21272498	chr21:21272498:M	GCGCGCGCGCGC	<4>,<7>	.	.	Motif=GC	GT:AD:DP:PL	1/2:0,11,6:17:255,80,111,242,0,241	1/2:0,27,13:40:255,169,238,255,0,255	1/2:1,11,5:17:255,53,98,226,0,240
-chr21	21272509	chr21:21272509:M	CACACACACACACACACACACACAC	<9.5>,<10.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,15,11:29:255,151,66,237,0,154	2/2:0,3,29:32:255,255,255,96,51,0	1/2:0,27,13:42:255,178,55,255,0,255
-chr21	21272935	chr21:21272935:M	CACACACACACACACACACACACACACACGGGACATGCATTCACACACATACACACACACACACACACACACACA	<35.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,3:3:80,9,0	0/0:0,0:1:0,0,0	1/1:0,1:1:27,3,0
-chr21	21280170	chr21:21280170:M	GTGTGTGTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,18:36:240,0,239	1/1:0,45:45:255,132,0	0/1:23,26:49:255,0,255
-chr21	21298589	chr21:21298589:M	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGATAGA	<10.5>,<11.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/2:0,8,13:23:255,226,166,140,0,79	1/1:0,20,0:21:255,60,0,255,58,255	1/2:0,13,12:28:255,206,132,225,0,151
-chr21	21301371	chr21:21301371:M	TTTTTTTTTTTCTATTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,11:18:255,0,94	1/1:0,29:30:255,90,0	0/1:13,19:35:255,0,255
-chr21	21308063	chr21:21308063:M	ACACACATACACACACACACACACGTACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:17,7:26:122,0,255	1/1:0,19:21:255,62,0	0/1:18,8:27:138,0,255
-chr21	21311336	chr21:21311336:M	TTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:5:71,0,44	1/1:0,8:10:251,29,0	0/1:1,3:4:77,0,18
-chr21	21312567	chr21:21312567:M	GAAAAAGAAAAAAAAA	<2.5>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:27,29:56:255,0,255	1/1:0,38:38:255,114,0	0/1:28,19:47:255,0,255
-chr21	21316534	chr21:21316534:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3,0:8:32,0,52,41,47,125	1/2:1,1,4:6:53,53,104,2,0,14	0/2:4,0,5:9:61,87,199,0,58,43
-chr21	21319704	chr21:21319704:M	TTATTTTTTTTTTATTTTT	<3.3>	.	.	Motif=TTATTT	GT:AD:DP:PL	1/1:1,35:36:255,85,0	1/1:1,48:50:255,125,0	1/1:0,33:33:255,99,0
-chr21	21327307	chr21:21327307:M	AAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:6:19,0,29	0/1:2,4:6:47,0,15	1/1:0,1:1:17,3,0
-chr21	21331518	chr21:21331518:M	TATATATATATATATATACTCTATATACATATATATATATACTCTATATACATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:6:54,13,0	1/1:0,3:3:32,8,0	1/1:0,4:5:43,11,0
-chr21	21331579	chr21:21331579:M	AGAGAGAGAGAGAGAGAGAGAGAGTGAGAGAGAGA	<20.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,2:2:53,6,0	0/0:1,0:2:0,3,28	1/1:0,3:6:118,17,0
-chr21	21331901	chr21:21331901:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:11,12:23:164,0,145	1/1:0,24:24:255,71,0	0/1:15,16:31:210,0,191
-chr21	21341709	chr21:21341709:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:0,29:30:255,85,0	1/1:1,19:21:255,33,0
-chr21	21343353	chr21:21343353:M	ACACATACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,7:15:255,121,160,203,0,186	2/2:0,0,14:15:234,255,255,41,41,0	1/2:0,11,13:24:255,221,255,255,0,251
-chr21	21346209	chr21:21346209:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:34:216,0,189	0/1:14,4:21:8,0,209	0/1:20,9:29:73,0,255
-chr21	21351118	chr21:21351118:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:87,9,0	1/1:0,5:7:168,21,0	1/1:0,3:4:97,12,0
-chr21	21352827	chr21:21352827:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,1,15:26:214,218,255,0,165,109	1/2:2,22,13:38:255,158,141,255,0,255	0/2:9,1,11:22:152,151,255,0,156,113
-chr21	21356988	chr21:21356988:M	AATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<10.8>,<11.8>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,9,10:19:255,191,139,149,0,119	1/1:0,14,0:14:255,41,0,255,41,255	1/2:0,3,4:7:153,74,55,48,0,36
-chr21	21365239	chr21:21365239:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13>,<14>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,32,0:34:255,102,0,255,100,255	1/2:0,8,9:17:255,157,107,140,0,90	1/1:0,19,0:19:255,57,0,255,56,255
-chr21	21378176	chr21:21378176:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:0,39:39:255,115,0	1/1:0,47:50:255,146,0
-chr21	21385372	chr21:21385372:M	ACACACACACACACACACACACACACACGCACACACACATACACACACACA	<29.5>,<30.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:4,0,4:10:99,80,183,0,113,99	1/2:0,6,5:12:255,86,52,112,0,80	0/2:8,0,4:12:81,70,255,0,211,199
-chr21	21387177	chr21:21387177:M	CACACACACATACACACACACACACACACACACACACACACACACACA	<23>,<25>,<27>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,10,0,4:14:255,109,80,255,108,255,179,0,255,255	2/3:1,0,6,9:17:255,255,255,236,251,222,87,162,0,143	1/3:0,11,0,0:17:205,43,11,236,44,255,193,0,255,255
-chr21	21400598	chr21:21400598:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,6:19:52,0,171	0/0:20,1:23:0,47,255	0/1:13,8:21:79,0,168
-chr21	21411006	chr21:21411006:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:12:0,9,255	0/1:9,5:15:101,0,187	0/0:16,2:19:0,0,255
-chr21	21411220	chr21:21411220:M	ATATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:28,11:39:20,0,255	0/0:29,0:29:0,87,255	0/0:29,5:34:0,40,255
-chr21	21414474	chr21:21414474:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,9:18:110,0,109	0/0:13,0:14:0,41,233	1/1:2,14:17:225,14,0
-chr21	21414950	chr21:21414950:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,14:33:173,0,239	1/1:1,36:38:255,93,0	0/1:11,20:33:255,0,104
-chr21	21416495	chr21:21416495:M	AAAAAAAAAAAGAAAAGAAAAAAGAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,11:25:224,0,255	1/1:0,35:37:255,110,0	0/1:21,9:31:163,0,255
-chr21	21419306	chr21:21419306:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,6:10:142,0,58	1/1:0,11:14:255,41,0	0/1:3,5:10:119,0,57
-chr21	21431047	chr21:21431047:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,52	1/1:0,0:2:2,1,0	0/1:1,3:4:39,0,5
-chr21	21431124	chr21:21431124:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,17:36:177,0,208	1/1:0,12:16:191,35,0	0/1:18,18:36:189,0,187
-chr21	21431321	chr21:21431321:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:33:205,0,223	1/1:0,36:37:255,108,0	0/1:16,23:39:255,0,179
-chr21	21436760	chr21:21436760:M	TTTTTTTTTCTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6,1:17:63,0,146,93,140,255	1/2:0,10,21:34:255,255,255,171,0,183	0/1:21,24,0:45:255,0,251,255,255,255
-chr21	21436929	chr21:21436929:M	TTTTTTTTTTTATTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:12,17:29:219,0,130	0/0:34,1:35:0,85,255
-chr21	21437475	chr21:21437475:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,0,4:22:65,116,255,0,255,255	1/2:0,12,6:18:255,156,120,255,0,255	0/2:14,0,4:20:72,116,255,0,255,255
-chr21	21437909	chr21:21437909:M	ATATTATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:44,0:44:0,132,255	0/1:24,10:34:207,0,255	0/0:43,0:43:0,129,255
-chr21	21439123	chr21:21439123:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:29:0,87,255	0/1:14,9:24:174,0,255	0/0:29,0:33:0,95,255
-chr21	21440690	chr21:21440690:M	AAAAAAAAGAAAAGAAAAGAAAAGAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:255,0,255	0/1:17,14:31:255,0,255	0/1:15,19:34:255,0,255
-chr21	21443425	chr21:21443425:M	TTTTTTTTTTCTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:31:242,0,149	0/1:17,16:33:183,0,201	0/1:21,25:46:255,0,244
-chr21	21450290	chr21:21450290:M	GTGTGTGTGTGTTTGTGTGTGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:25,0:26:0,75,255	0/1:21,20:43:255,0,255
-chr21	21450772	chr21:21450772:M	ATGTATGTATGTATGTATGTAT	<8>	.	.	Motif=ATGT	GT:AD:DP:PL	0/0:15,2:17:0,2,255	0/1:11,5:17:70,0,234	0/0:11,1:12:0,12,246
-chr21	21450794	chr21:21450794:M	ACACACACACACACACACACACACACACACACACACACACA	<11.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,13:26:255,255,255,255,0,255	0/1:0,23,0:30:255,0,10,255,79,255	1/2:0,13,9:22:255,252,213,255,0,255
-chr21	21450959	chr21:21450959:M	ATATATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:23,20:43:255,0,255	0/1:17,30:48:255,0,166	0/1:17,22:39:255,0,204
-chr21	21452169	chr21:21452169:M	CACACACACACACACACACACACACACA	<12>,<13>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,24,18:42:255,255,215,255,0,255	0/1:11,9,0:23:217,0,253,173,192,255	1/2:1,14,11:26:255,153,137,235,0,181
-chr21	21452572	chr21:21452572:M	TATTGTATATATATTGTATTGT	<2.2>	.	.	Motif=TATTG	GT:AD:DP:PL	1/1:0,4:4:111,12,0	.	.
-chr21	21455211	chr21:21455211:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,5:15:248,125,99,144,0,193	0/1:8,6,0:17:76,0,92,118,130,255	1/1:1,12,1:16:204,26,0,216,18,255
-chr21	21460933	chr21:21460933:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,21:42:255,0,255	1/1:1,37:39:255,96,0	0/1:19,15:34:176,0,249
-chr21	21472968	chr21:21472968:M	ACACACACACACACACACACACACACGCACACATACACACACACACAC	<25>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,13:23:169,0,105	0/0:23,1:24:0,53,255	0/1:14,13:30:146,0,183
-chr21	21473301	chr21:21473301:M	TATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,10:25:121,0,215	0/0:26,0:26:0,77,255	0/1:16,9:25:96,0,228
-chr21	21473345	chr21:21473345:M	TATATATAATATACAAAATATATGTATAAATATATATATATATATATATTATATATA	<31.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,7:16:179,0,201	0/0:2,0:2:0,6,58	0/1:0,2:4:46,0,13
-chr21	21473904	chr21:21473904:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:24:109,0,181	1/1:1,13:16:205,19,0	0/1:16,7:24:55,0,215
-chr21	21474979	chr21:21474979:M	TATATATATAACACATATATAATACATTATAATACATATATATAATACACATATATAATGCACATATATATATATATA	<38>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,4:5:61,0,4	0/0:8,0:8:0,24,143	0/1:7,2:9:11,0,103
-chr21	21480367	chr21:21480367:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:7:58,0,14	0/0:4,0:4:0,12,66	1/1:0,4:4:68,12,0
-chr21	21488276	chr21:21488276:M	ATTATAATTAATTATAAT	<3.2>	.	.	Motif=ATTATA	GT:AD:DP:PL	1/1:0,44:44:255,132,0	1/1:0,26:26:255,78,0	1/1:0,45:45:255,135,0
-chr21	21495993	chr21:21495993:M	TATATATATATGAAATATATATATAATATATAAAATATATATAT	<24>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,10:15:196,0,76	1/1:0,5:5:117,15,0	0/1:5,3:10:48,0,96
-chr21	21500528	chr21:21500528:M	ATTTTCATTTTCCTTTT	<2.7>	.	.	Motif=ATTTTC	GT:AD:DP:PL	0/1:26,15:41:255,0,255	0/0:48,0:48:0,144,255	0/1:22,22:44:255,0,255
-chr21	21501618	chr21:21501618:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,0,8:28:65,145,255,0,255,255	0/1:13,16,0:29:195,0,142,255,190,255	1/2:5,29,17:51:255,224,255,255,0,255
-chr21	21507789	chr21:21507789:M	AAAAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,1,2:6:32,8,69,0,6,21	0/1:5,7,0:15:187,0,116,200,93,255	0/2:5,0,6:13:70,103,255,0,94,62
-chr21	21508809	chr21:21508809:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,8:9:241,27,0	.
-chr21	21514466	chr21:21514466:M	AAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,68,0	1/1:0,26:26:255,78,0	1/1:0,7:9:190,11,0
-chr21	21522244	chr21:21522244:M	ATATATATGAATACTATATTTATATATAAATATGATTATATAT	<19.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,11:11:255,33,0	1/1:0,2:2:73,6,0	0/1:6,5:11:152,0,126
-chr21	21522613	chr21:21522613:M	TTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<39>,<40>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:57,41,36,6,6,0	1/2:0,3,5:10:228,102,78,51,0,22	0/2:4,0,1:6:10,17,127,0,112,109
-chr21	21524424	chr21:21524424:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:29:0,81,255	0/1:10,17:30:255,0,213	0/0:27,0:28:0,81,255
-chr21	21527114	chr21:21527114:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,3:24:0,14,255	0/1:17,8:26:74,0,221	0/0:25,0:26:0,67,255
-chr21	21531827	chr21:21531827:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:14:0,40,235	0/1:7,4:12:34,0,93	0/0:28,1:31:0,73,255
-chr21	21533649	chr21:21533649:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:31:0,69,255	0/1:13,7:21:61,0,174	0/1:12,10:25:107,0,172
-chr21	21536394	chr21:21536394:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:15,9:25:95,0,189	0/1:10,12:24:166,0,111
-chr21	21540255	chr21:21540255:M	ATATATATATACACATATATATATATACACATATATATACATATATATATAT	<25>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,0:15:0,44,255	0/1:6,3:9:28,0,81	0/1:12,7:19:76,0,168
-chr21	21546804	chr21:21546804:M	TATATATATGTATATAAAAACATGTATGTATATATATGTATATACATACATGTTTATATATATACATATATATA	<23>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,2:7:35,0,121	0/1:1,3:6:66,0,39	0/1:10,4:14:72,0,240
-chr21	21548032	chr21:21548032:M	TGGTGGTGGTGGTGGTGGTGGT	<6.3>	.	.	Motif=TGG	GT:AD:DP:PL	0/0:20,0:22:0,64,255	0/1:11,14:29:202,0,120	0/0:22,0:24:0,70,255
-chr21	21548052	chr21:21548052:M	GTTTTTTTGTTTGTTTGTTTGTT	<7.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:11,9:21:209,0,236	0/0:29,0:29:0,87,255
-chr21	21551647	chr21:21551647:M	ACACACCCACACCACACACACACACACACACACACACACACACA	<19>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/2:16,0,9:26:93,166,255,0,255,221	0/1:7,12,0:21:255,0,157,255,130,255	0/2:17,0,12:29:131,215,255,0,255,220
-chr21	21556370	chr21:21556370:M	TTTTTTTTTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,11:25:135,0,164	0/1:8,17:26:218,0,72	1/1:2,27:30:255,52,0
-chr21	21562032	chr21:21562032:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:16,0:21:0,47,255	0/1:4,9:14:111,0,28	0/0:18,0:18:0,53,255
-chr21	21568386	chr21:21568386:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:32,0,120	0/0:11,0:12:0,32,183	0/0:14,1:16:0,26,223
-chr21	21569748	chr21:21569748:M	CACACACACACACAAGGAACACACACATACACGCACACACACA	<22.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/0:15,0:16:0,47,255	0/1:14,13:27:162,0,182
-chr21	21573511	chr21:21573511:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,1:42:0,95,255	0/1:8,11:20:138,0,84	0/0:23,0:23:0,68,255
-chr21	21574435	chr21:21574435:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/1:23,22:46:255,0,255	0/0:42,0:42:0,124,255
-chr21	21576758	chr21:21576758:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:5:101,60,48,14,0,2	1/2:1,6,3:11:148,42,28,64,0,78	1/2:0,2,3:5:102,49,35,27,0,18
-chr21	21577180	chr21:21577180:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:11,8:20:93,0,132	0/0:17,1:19:0,38,255
-chr21	21578022	chr21:21578022:M	ACACACACACACACACACACACACACACAC	<16>	.	.	Motif=AC	GT:AD:DP:PL	0/0:29,0:31:0,90,255	0/1:19,11:32:108,0,249	0/0:34,0:36:0,105,255
-chr21	21579437	chr21:21579437:M	ATATATATATATACATATA	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/1:15,6:22:114,0,255	0/0:33,0:33:0,99,255
-chr21	21581115	chr21:21581115:M	TTTTTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,12:16:221,255,255,29,47,0	1/2:0,17,5:26:255,80,69,255,0,255	2/2:0,1,12:16:232,239,255,43,17,0
-chr21	21592329	chr21:21592329:M	AAAAAAAAAACAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,106,255	0/1:22,17:39:196,0,255	0/0:42,0:43:0,127,255
-chr21	21599770	chr21:21599770:M	AAAACAAAACAAAAAAAAAC	<4.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:31,0:31:0,93,255	0/0:36,0:36:0,108,255	0/1:25,16:41:255,0,255
-chr21	21603052	chr21:21603052:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,31:32:255,96,0	1/1:0,23:25:255,74,0
-chr21	21603633	chr21:21603633:M	AAAAAAAAAATAGAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:38:255,112,0	0/1:20,24:44:255,0,227	0/1:23,22:45:255,0,255
-chr21	21616069	chr21:21616069:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:40:238,0,255	0/0:36,0:38:0,111,255	0/1:23,16:39:177,0,255
-chr21	21636654	chr21:21636654:M	ATTTATTTATTTATTTA	<5.2>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:27,22:49:255,0,255	0/1:19,15:34:182,0,255
-chr21	21639473	chr21:21639473:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:15,11:29:120,0,200	0/1:14,19:33:249,0,157
-chr21	21642019	chr21:21642019:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,111,255	0/1:11,8:20:148,0,245	0/1:10,5:18:86,0,222
-chr21	21658675	chr21:21658675:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:25:255,69,0	1/1:2,19:23:255,7,0	1/1:1,15:19:255,19,0
-chr21	21678015	chr21:21678015:M	TTTTTTTTTTTTTGTTTTTTTTGTTTTTTTTTTTTTT	<21>,<39>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:5:120,125,138,12,15,0	1/1:0,15,0:16:255,33,0,255,33,255	1/1:0,15,1:16:255,44,0,255,17,255
-chr21	21680621	chr21:21680621:M	TTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:12,3,0	1/1:0,11:12:255,36,0	1/1:0,13:15:255,45,0
-chr21	21689957	chr21:21689957:M	TATTATTATTTTATTA	<5.7>	.	.	Motif=TAT	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,43:43:255,129,0	1/1:0,38:38:255,114,0
-chr21	21691734	chr21:21691734:M	TTTTTTTTTTTTTT	<13>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45,0:47:255,138,0,255,141,255	1/2:1,24,7:34:255,182,129,255,0,255	1/2:1,22,15:40:255,255,255,255,0,255
-chr21	21692585	chr21:21692585:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,38:40:255,81,0	1/1:1,22:23:255,50,0	1/1:1,30:34:255,61,0
-chr21	21698212	chr21:21698212:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,20:23:249,22,0	1/1:1,11:14:124,7,0	1/1:2,12:14:145,11,0
-chr21	21703021	chr21:21703021:M	ATCATCATCATCATCATCA	<5.3>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:0,25:25:255,74,0	1/1:0,43:43:255,127,0
-chr21	21704904	chr21:21704904:M	TTTTCTTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,48,0	0/1:5,9:15:222,0,109	0/1:4,15:23:255,0,69
-chr21	21712686	chr21:21712686:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:14,17:31:212,0,158	0/1:15,23:40:255,0,167
-chr21	21717302	chr21:21717302:M	TATACTATACT	<1.2>	.	.	Motif=TATAC	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:24,11:35:97,0,255	0/1:20,19:39:247,0,255
-chr21	21718440	chr21:21718440:M	AGTATAGTATACCATAGTATGTAT	<5>	.	.	Motif=AGTAT	GT:AD:DP:PL	1/1:0,24:24:255,66,0	1/1:0,32:32:255,89,0	1/1:0,32:32:255,89,0
-chr21	21720243	chr21:21720243:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCTTCCT	<16.2>,<18.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,11,0:11:255,33,0,255,33,255	1/1:0,14,0:15:255,45,0,255,45,255	1/2:0,5,3:8:210,78,62,130,0,121
-chr21	21722379	chr21:21722379:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,1:19:0,29,255	0/1:13,13:26:255,0,255	0/1:6,10:17:230,0,114
-chr21	21725339	chr21:21725339:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,30	1/1:0,0:2:27,6,0	0/1:1,3:4:82,0,18
-chr21	21742413	chr21:21742413:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:10:203,2,0	0/1:1,1:2:22,0,21	0/1:7,1:9:3,0,164
-chr21	21755217	chr21:21755217:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:14,18:32:228,0,156	0/1:15,13:29:165,0,192
-chr21	21755677	chr21:21755677:M	TTTTTTTTTTTGTTTGTTTTGTTTTGTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:41:0,67,255	0/1:13,8:25:99,0,198	0/1:17,19:43:255,0,242
-chr21	21757626	chr21:21757626:M	AAAAAAAAAAAAAGAAAAAAAGAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:14,9:24:94,0,174	0/1:4,16:20:227,0,13
-chr21	21762446	chr21:21762446:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<6>,<10>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,37,0:37:255,111,0,255,111,255	1/2:0,16,15:31:255,255,255,255,0,255	1/2:0,22,9:32:255,176,185,255,0,255
-chr21	21780037	chr21:21780037:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGT	<20>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,6,0:16:127,0,228,156,168,255	1/2:1,9,8:18:255,119,192,219,0,210	0/2:5,0,7:12:89,123,255,0,88,53
-chr21	21790945	chr21:21790945:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,1,3:7:32,34,98,0,27,42	1/2:2,2,2:8:38,5,37,23,0,63	0/1:2,7,0:10:103,0,5,127,29,210
-chr21	21793477	chr21:21793477:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,1:37:0,89,255	0/1:14,26:44:255,0,139	0/1:14,17:33:213,0,185
-chr21	21809024	chr21:21809024:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:14:255,42,0	1/1:0,10:12:255,35,0	1/1:0,13:13:255,39,0
-chr21	21816049	chr21:21816049:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,22,9:31:255,236,174,255,0,255	0/2:14,1,9:25:185,218,255,0,227,255	0/1:12,20,0:34:255,0,118,255,215,255
-chr21	21831461	chr21:21831461:M	TATATATATATATATATATATATATATATATATATATATATA	<8>,<10>,<14>	.	.	Motif=TA	GT:AD:DP:PL	1/3:0,9,2,10:28:255,255,255,255,255,255,255,0,188,255	1/2:0,10,7,0:18:255,150,101,228,0,174,255,150,228,255	3/3:1,0,0,7:13:255,255,255,255,255,255,2,32,29,0
-chr21	21831902	chr21:21831902:M	ACACACACACACACACACACACACACACACA	<12.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,17:35:255,255,255,255,0,255	0/1:10,8,0:19:194,0,240,219,174,255	0/2:13,0,18:31:236,255,255,0,235,145
-chr21	21849015	chr21:21849015:M	TGTGTGTGTTTATGTGTGTATGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<25.5>,<28.5>,<31.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,5,0:12:255,92,120,184,0,169,255,141,184,255	2/3:1,0,7,1:10:106,133,248,10,38,13,102,209,0,202	1/3:0,9,0,4:13:255,108,83,255,110,255,255,0,255,246
-chr21	21853576	chr21:21853576:M	ACACACACACACACATACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,11:29:49,0,130	0/0:32,0:35:0,95,255	0/1:14,9:30:23,0,159
-chr21	21861251	chr21:21861251:M	ACACACACACACACACAC	<8>,<10>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,14:32:255,255,255,255,0,255	0/2:23,0,16:39:178,255,255,0,255,255	0/1:14,23,0:37:255,0,156,255,226,255
-chr21	21863873	chr21:21863873:M	ACAACAACAACAACAACAACAACAACAACAACAACAACAA	<10>	.	.	Motif=ACA	GT:AD:DP:PL	0/1:9,18:27:255,0,172	0/0:23,0:23:0,69,255	0/1:9,10:20:218,0,203
-chr21	21869562	chr21:21869562:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,18:35:232,0,214	0/0:35,0:37:0,108,255	0/1:6,15:21:210,0,47
-chr21	21870371	chr21:21870371:M	TTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,4,1:7:50,0,19,38,3,140	1/1:0,16,0:18:255,52,0,255,54,255	1/2:0,9,6:18:255,180,179,158,0,255
-chr21	21871318	chr21:21871318:M	ATTATTATTATTATTATTATTATTATTATT	<11>,<12>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,9,0:23:106,0,202,148,255,255	0/2:8,0,2:10:28,35,151,0,142,203	1/2:0,10,11:21:255,202,144,159,0,126
-chr21	21878669	chr21:21878669:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:16,17:33:205,0,186	0/1:17,19:36:243,0,204
-chr21	21886166	chr21:21886166:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:37:0,91,255	0/1:10,12:26:138,0,100	0/0:25,0:33:0,66,255
-chr21	21890012	chr21:21890012:M	TTTTGTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:150,0,185	0/1:16,22:38:255,0,160	0/0:38,0:39:0,114,255
-chr21	21891325	chr21:21891325:M	TTTTTTTTGTTTGTTTGTTTTGTTTTTTGTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,16:30:221,0,181	0/1:11,13:25:163,0,133	0/0:34,0:34:0,100,255
-chr21	21895791	chr21:21895791:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,6:11:136,0,80	1/1:0,2:6:56,7,0	0/1:5,1:7:16,0,120
-chr21	21900123	chr21:21900123:M	AAAGAAAAAAAAAAAAAGAAAGAAAGAAAG	<6.5>,<7.8>	.	.	Motif=AAAG	GT:AD:DP:PL	2/2:0,0,19:20:247,255,255,55,60,0	2/2:1,0,21:22:248,255,255,48,65,0	1/2:0,13,9:22:255,110,175,234,0,255
-chr21	21900498	chr21:21900498:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:9:116,8,0	0/1:3,3:8:43,0,30	1/1:0,1:1:17,3,0
-chr21	21909098	chr21:21909098:M	ACACACACACACACACACACACAC	<11>,<14>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,34:34:255,255,255,102,102,0	2/2:0,0,28:30:255,255,255,84,90,0	1/2:0,18,12:30:255,255,255,255,0,255
-chr21	21911154	chr21:21911154:M	AAAAAAAAAAAAAAAAAGAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,46,0	1/1:1,11:13:156,13,0	0/1:2,6:8:77,0,10
-chr21	21911395	chr21:21911395:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/0:42,3:45:0,80,255	0/1:14,21:37:255,0,160
-chr21	21912501	chr21:21912501:M	CACACACACACACACACACACACACACACACACACACACACACA	<17>,<23>	.	.	Motif=CA	GT:AD:DP:PL	0/2:16,0,13:30:141,227,255,0,255,205	0/0:15,0,0:18:0,53,255,52,255,255	1/2:2,11,5:21:255,51,110,255,0,255
-chr21	21913199	chr21:21913199:M	TTTTCTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:36:0,105,255	0/0:33,0:37:0,99,255	0/1:22,20:42:255,0,255
-chr21	21913905	chr21:21913905:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:7:87,3,0	0/1:2,6:8:77,0,10	1/1:0,6:7:113,20,0
-chr21	21921722	chr21:21921722:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,38:38:255,112,0	1/1:1,54:55:255,144,0
-chr21	21928854	chr21:21928854:M	ACACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:13:0,38,243	0/0:10,0:10:0,29,177	0/1:16,9:25:91,0,219
-chr21	21930841	chr21:21930841:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,27:28:255,81,0	0/1:9,4:18:64,0,215
-chr21	21931300	chr21:21931300:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,4:4:70,70,70,12,12,0	1/2:1,3,6:10:139,67,82,33,0,21	1/2:0,1,2:3:54,29,26,17,0,8
-chr21	21931502	chr21:21931502:M	ATATATATTATATATAATAATGTAACATATATTATATAGTATATATATATATA	<28.5>,<29.5>,<31.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:0,0,7,5:14:255,239,216,127,125,93,157,87,0,124	2/2:0,0,5,0:5:141,75,60,15,14,0,124,74,15,115	1/1:0,8,0,0:8:186,24,0,119,22,98,201,24,121,228
-chr21	21931554	chr21:21931554:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAG	<11>,<13>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,17,19:44:255,239,255,255,0,255	2/2:0,0,18:20:236,255,255,55,54,0	0/1:8,8,2:20:196,0,184,174,72,228
-chr21	21944388	chr21:21944388:M	TTTTTCTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,8:20:93,99,255,0,173,134	0/0:9,1,0:11:0,5,244,20,163,151	1/2:0,10,4:14:255,58,27,169,0,130
-chr21	21947321	chr21:21947321:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:31:255,90,0	1/1:0,35:37:255,108,0	1/1:0,34:35:255,103,0
-chr21	21957321	chr21:21957321:M	ATATATATACATATATATATATATATATAT	<16>	.	.	Motif=AT	GT:AD:DP:PL	0/0:23,1:24:0,52,255	0/1:4,7:11:93,0,39	0/1:10,12:23:154,0,126
-chr21	21959696	chr21:21959696:M	AATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,40:40:255,118,0	1/1:0,34:34:255,100,0
-chr21	21963149	chr21:21963149:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:19:255,56,0	1/1:1,27:29:255,65,0	1/1:2,24:27:255,44,0
-chr21	21970357	chr21:21970357:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,23:25:255,72,0	1/1:1,31:33:255,78,0
-chr21	21972019	chr21:21972019:M	TTTTTTTTTTGTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30,0:32:255,96,0,255,94,255	1/1:0,29,1:31:255,90,0,255,73,255	1/2:1,15,14:31:255,193,170,253,0,186
-chr21	21980902	chr21:21980902:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:6:65,0,0	0/1:1,3:5:47,0,3	1/1:0,4:6:97,17,0
-chr21	21986197	chr21:21986197:M	TCTTTCTTTCTTTCTTTCTTCTTT	<7>	.	.	Motif=TCTT	GT:AD:DP:PL	0/1:12,7:20:70,0,176	0/0:22,0:22:0,64,255	0/1:12,9:22:96,0,167
-chr21	21986218	chr21:21986218:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:15:0,0,134	0/0:12,0:13:0,35,201	0/1:5,8:14:99,0,48
-chr21	21986630	chr21:21986630:M	TATATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,4:8:56,0,10	0/1:0,1:2:10,0,7	0/0:0,0:2:0,1,2
-chr21	21987890	chr21:21987890:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/0:33,0:34:0,102,255	0/1:15,18:34:255,0,255
-chr21	21994807	chr21:21994807:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>	.	.	Motif=TG	GT:AD:DP:PL	0/0:13,1:15:0,16,205	0/1:6,8:14:95,0,61	0/1:5,11:16:146,0,40
-chr21	21997415	chr21:21997415:M	CTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCT	<22>	.	.	Motif=CT	GT:AD:DP:PL	0/1:12,10:22:123,0,160	1/1:2,19:22:255,27,0	0/0:21,1:22:0,47,255
-chr21	21998954	chr21:21998954:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8,1:20:183,0,234,201,158,255	1/1:1,17,0:22:255,34,0,255,54,255	0/2:14,0,7:26:48,109,255,0,243,225
-chr21	22018550	chr21:22018550:M	GTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/1:9,10:21:121,0,122	0/1:13,5:19:34,0,172	1/1:1,17:18:255,35,0
-chr21	22019648	chr21:22019648:M	TATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,30:38:255,93,0	1/1:1,19:23:255,40,0	1/1:1,23:25:255,47,0
-chr21	22019664	chr21:22019664:M	TGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:2,36:43:255,65,0	1/1:0,18:18:255,54,0	1/1:0,23:26:255,69,0
-chr21	22027397	chr21:22027397:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:255,38,0	1/1:0,17:18:255,51,0	1/1:0,20:20:255,60,0
-chr21	22027975	chr21:22027975:M	AAAAAAAAAAAAAAAAGAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:22:255,60,0	1/1:1,25:30:255,53,0	1/1:2,27:34:255,31,0
-chr21	22028158	chr21:22028158:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:2,36:40:255,81,0	1/1:0,36:36:255,106,0
-chr21	22037072	chr21:22037072:M	ATTTTTATTTTTATTTTTATTT	<4.7>	.	.	Motif=ATTTTT	GT:AD:DP:PL	1/1:0,29:34:255,61,0	1/1:0,29:33:255,61,0	1/1:0,28:32:255,51,0
-chr21	22038801	chr21:22038801:M	TTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:188,21,0	1/1:0,4:6:147,18,0	1/1:0,5:9:199,26,0
-chr21	22079649	chr21:22079649:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/1:14,13:29:149,0,167	0/0:34,0:34:0,100,255
-chr21	22085803	chr21:22085803:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,47:49:255,126,0	1/1:0,41:41:255,120,0	1/1:2,45:47:255,102,0
-chr21	22095972	chr21:22095972:M	TTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,16,0:22:255,0,26,207,82,255	1/2:0,5,3:10:228,39,10,82,0,59	1/2:0,13,7:25:255,91,37,166,0,129
-chr21	22107048	chr21:22107048:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,35:35:255,104,0	0/1:20,15:35:168,0,255	1/1:0,44:44:255,130,0
-chr21	22110951	chr21:22110951:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,10:13:173,35,0	.
-chr21	22113151	chr21:22113151:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,62,0	0/1:4,11:15:145,0,25	0/1:10,7:18:82,0,125
-chr21	22115310	chr21:22115310:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:63,11,0	1/1:0,2:2:34,6,0	0/1:3,4:9:57,0,29
-chr21	22133073	chr21:22133073:M	GGGGGGGGGGG	<12>,<13>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,6,0:6:105,18,0,105,18,105	1/2:0,8,3:11:187,50,18,110,0,101	0/1:12,3,0:16:5,0,172,44,214,255
-chr21	22137207	chr21:22137207:M	AAATATAATATATATAAATATAAAT	<4.5>	.	.	Motif=AAATAT	GT:AD:DP:PL	0/1:12,15:27:255,0,237	0/1:18,9:27:154,0,255	0/0:43,0:43:0,129,255
-chr21	22137249	chr21:22137249:M	AAAACAAAAACAAA	<2.5>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,40:40:255,120,0	1/1:0,43:43:255,129,0
-chr21	22156912	chr21:22156912:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17,1:33:217,0,190,255,216,255	0/2:13,1,11:27:127,172,255,0,164,163	0/1:11,26,1:40:255,0,92,255,150,255
-chr21	22165708	chr21:22165708:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:255,199,173,30,29,0	1/2:2,13,8:23:255,97,65,145,0,170	2/2:0,0,5:6:151,109,95,18,17,0
-chr21	22169136	chr21:22169136:M	AAAAAAAAAAAAAAAAAAAAAAA	<18>,<24>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,3:4:52,60,92,9,10,0	1/2:0,3,3:7:134,48,68,94,0,85	0/0:9,0,0:12:0,30,255,20,178,148
-chr21	22173482	chr21:22173482:M	ATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,37:39:255,114,0	1/1:2,38:40:255,82,0	0/1:18,24:44:255,0,199
-chr21	22181778	chr21:22181778:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:217,0,180	0/0:27,2:30:0,44,255	0/1:18,15:35:175,0,230
-chr21	22187839	chr21:22187839:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:138,0,160	0/0:19,0:19:0,56,255	0/1:18,9:28:84,0,255
-chr21	22190801	chr21:22190801:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:13:195,21,0	1/1:1,8:9:118,9,0	1/1:0,16:16:255,47,0
-chr21	22227390	chr21:22227390:M	TTTTTTATTTTTTTTTGTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:27:0,61,255	0/0:43,0:44:0,129,255	0/1:21,17:38:205,0,255
-chr21	22232657	chr21:22232657:M	GGAAGGAAGGGAGGAAGGAAGGAAGGAAAAGAAGGAAGGAAGAAAGGAAGGAAAAAAGGAAGGAGGGAGGGAGGGAAGGAA	<33.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,9:9:106,25,0	1/1:0,3:3:35,8,0	1/1:0,2:3:23,5,0
-chr21	22237285	chr21:22237285:M	TCTCTCTCTCTCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:14,11:30:126,0,214	0/1:4,1:8:1,0,73	0/0:23,0:25:0,71,255
-chr21	22237303	chr21:22237303:M	TATATATATATATATTACATATATATATATATATATA	<20.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,18:23:255,32,0	1/1:0,0:1:0,0,0	0/1:12,8:22:138,0,238
-chr21	22237532	chr21:22237532:M	ACACACACACACACATACATATACACACACACACACACACACACACACACACACACA	<23.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:17,0,0:19:0,57,255,57,255,255	0/1:7,7,0:14:168,0,162,189,183,255	0/2:7,0,5:12:106,127,255,0,182,167
-chr21	22238420	chr21:22238420:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,11:13:255,36,0	0/0:1,0:3:0,8,51
-chr21	22258321	chr21:22258321:M	TAGATGATAGCTAGCTAGCTAGCTAGATAGATAGATAGATAGATA	<10.2>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,20:20:255,59,0	1/1:0,6:6:112,18,0
-chr21	22262706	chr21:22262706:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,43:47:255,127,0	0/1:20,17:37:183,0,234	0/1:18,23:41:255,0,197
-chr21	22265996	chr21:22265996:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	1/1:1,12:13:187,21,0	1/1:0,15:15:255,44,0
-chr21	22269977	chr21:22269977:M	TATATATATATATATA	<9>,<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/3:1,13,1,17:32:255,255,255,255,255,255,230,0,239,255	1/2:0,10,7,0:17:255,126,77,152,0,131,255,107,179,255	3/3:0,0,2,15:23:255,255,255,255,255,255,56,50,18,0
-chr21	22271183	chr21:22271183:M	TTTTCTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:7,0:7:0,21,135	0/0:3,0:4:0,11,64	0/1:4,6:11:83,0,45
-chr21	22271870	chr21:22271870:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,20:48:243,0,255	0/1:21,28:49:255,0,228	1/1:1,38:39:255,97,0
-chr21	22277803	chr21:22277803:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:21,31:52:255,0,220	0/0:41,0:41:0,121,255
-chr21	22278107	chr21:22278107:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:30:255,86,0	1/1:0,15:16:255,48,0	1/1:0,14:15:255,45,0
-chr21	22282463	chr21:22282463:M	TCTCTCTCTCTCTCTCTCTCTCTCTC	<17>	.	.	Motif=TC	GT:AD:DP:PL	0/1:22,8:30:127,0,255	0/1:17,18:36:255,0,255	0/1:11,9:20:188,0,242
-chr21	22283049	chr21:22283049:M	TTTTCTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:140,0,86	0/1:3,5:9:68,0,25	0/1:5,14:20:194,0,29
-chr21	22285674	chr21:22285674:M	TATATAGATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,13:33:154,0,255	0/1:23,15:38:160,0,255	0/1:17,20:37:255,0,210
-chr21	22290578	chr21:22290578:M	TGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:25,18:43:255,0,255	0/1:25,31:57:255,0,255	0/1:24,27:52:255,0,255
-chr21	22291414	chr21:22291414:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,9:26:99,0,222	0/1:18,16:34:181,0,218	0/1:12,10:24:120,0,158
-chr21	22294925	chr21:22294925:M	AAAAAAAAAACAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:26:255,0,225	0/1:9,9:18:181,0,191	0/1:7,13:20:255,0,132
-chr21	22295091	chr21:22295091:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:10:255,30,0	1/1:0,7:8:209,24,0	1/1:0,2:5:98,14,0
-chr21	22295638	chr21:22295638:M	GTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGT	<17>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,5:16:255,89,99,255,0,255	1/2:0,20,14:34:255,236,255,255,0,255	1/2:0,11,10:24:255,189,242,255,0,255
-chr21	22296202	chr21:22296202:M	CATAACATAACATAACATAACATAACATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCATAGCAT	<11.6>,<13.6>,<15.6>	.	.	Motif=CATAG	GT:AD:DP:PL	2/3:0,0,8,1:10:255,255,255,22,37,9,240,236,0,231	2/3:0,0,8,2:10:255,255,255,37,67,39,234,229,0,223	1/3:0,11,0,4:15:255,77,109,255,135,255,255,0,255,255
-chr21	22300006	chr21:22300006:M	AATAAATAAATAAATAAATAAATAAATAAA	<10.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,4:4:113,12,0	1/1:0,4:4:113,12,0	1/1:0,10:11:255,33,0
-chr21	22309259	chr21:22309259:M	AATTAATTGATTAATTAATTGTATTAATAATTATTAATAATTATATTAATAATTA	<14.8>	.	.	Motif=AATT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,4:4:65,12,0	1/1:0,9:9:149,26,0
-chr21	22312532	chr21:22312532:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:4,26:32:255,21,0	1/1:3,19:24:255,15,0	1/1:3,35:40:255,55,0
-chr21	22314934	chr21:22314934:M	TATATATATATATATATAATTATATATGTACATATATATA	<18>,<19>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,13,13:26:255,215,176,252,0,176	1/2:0,4,1:5:136,15,3,73,0,58	1/2:0,8,5:13:255,80,56,149,0,112
-chr21	22320057	chr21:22320057:M	ACACACACACACACACACACACACACACACACATATATATATACACATACACATACACACACACACAC	<38>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,4:11:85,0,145	0/1:6,3:9:56,0,142	0/1:1,0:3:6,0,23
-chr21	22320726	chr21:22320726:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,5,5,0:12:255,133,108,148,0,126,244,82,148,229	1/2:0,15,7,0:25:255,188,127,255,0,255,255,115,255,255	1/3:0,10,0,5:16:255,135,102,255,76,255,255,0,255,255
-chr21	22322259	chr21:22322259:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:0,23:23:255,68,0	1/1:2,41:45:255,96,0
-chr21	22326471	chr21:22326471:M	TTTTGTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<38>,<39>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:4:42,0,6,45,18,72	2/2:0,0,2:2:54,39,34,6,6,0	1/2:0,2,3:5:105,52,38,30,0,21
-chr21	22355494	chr21:22355494:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:11:37,68,201,0,102,90	0/1:11,4,0:15:23,0,139,65,151,248	0/2:6,1,4:11:36,50,164,0,69,82
-chr21	22367768	chr21:22367768:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,11,8:22:255,87,79,112,0,165	1/1:3,13,3:19:204,4,0,137,4,204	1/2:0,11,4:19:255,79,42,153,0,143
-chr21	22368161	chr21:22368161:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTGTGTGTGTATGTATGTTTGTGTGTGTGTGTGTG	<34.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,4:11:60,0,44	0/1:3,3:6:33,0,33	0/1:8,5:14:56,0,100
-chr21	22371281	chr21:22371281:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:28:200,0,162	0/0:44,1:47:0,120,255	0/1:28,17:47:185,0,255
-chr21	22386058	chr21:22386058:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,7,4:14:132,38,78,100,0,180	1/2:0,9,8:18:239,129,173,155,0,216	1/2:1,11,7:19:235,102,150,169,0,255
-chr21	22389137	chr21:22389137:M	ATTTATTTATTTATTTATTT	<6>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:21,16:37:181,0,255	1/1:0,29:29:255,86,0
-chr21	22394071	chr21:22394071:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:32:255,95,0	1/1:2,39:42:255,87,0	1/1:1,34:40:255,98,0
-chr21	22397934	chr21:22397934:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,15:17:255,255,255,48,31,0	1/2:2,7,5:16:162,33,45,50,0,100	2/2:0,1,11:14:255,229,197,38,23,0
-chr21	22402360	chr21:22402360:M	TTTTTTTTTTTTTTTATTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,36:40:255,116,0	1/1:0,27:27:255,81,0
-chr21	22409781	chr21:22409781:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<15.2>	.	.	Motif=CCTT	GT:AD:DP:PL	1/1:0,11:13:255,32,0	1/1:0,9:13:217,29,0	1/1:0,18:24:255,55,0
-chr21	22417700	chr21:22417700:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,11:18:171,0,36	1/1:0,16:21:255,50,0	0/1:14,16:33:219,0,149
-chr21	22419763	chr21:22419763:M	ATATATATATATATGTATAT	<22>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:0,6,2:13:153,0,15,140,19,172	2/2:0,0,1:1:12,12,12,3,3,0	1/2:0,3,4:9:123,38,24,84,0,73
-chr21	22420261	chr21:22420261:M	ATGTATGTATTTATGTGTGTAT	<4.5>	.	.	Motif=ATGT	GT:AD:DP:PL	1/1:0,41:42:255,121,0	0/1:12,17:30:221,0,131	1/1:0,55:56:255,162,0
-chr21	22421148	chr21:22421148:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,100,0	0/1:26,20:46:223,0,255	1/1:1,25:26:255,59,0
-chr21	22422148	chr21:22422148:M	ACACACACACACACACACACACACACACACACA	<9.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,36,0:39:255,117,0,255,117,255	1/2:0,9,6:16:255,170,144,234,0,213	1/1:0,38,0:43:255,129,0,255,129,255
-chr21	22422180	chr21:22422180:M	ATATATATATATATA	<3.5>,<9.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,7,0,8:18:255,224,203,255,189,255,255,0,255,255	1/2:0,2,7,1:14:218,156,210,81,0,58,175,131,54,197	3/3:0,0,0,3:3:82,82,82,69,69,62,9,9,9,0
-chr21	22424318	chr21:22424318:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:3,1,26:30:255,255,255,33,69,0	1/2:0,10,13:24:255,188,157,171,0,106	2/2:1,1,25:27:255,255,255,61,61,0
-chr21	22427198	chr21:22427198:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:8:40,0,40	0/0:9,0:9:0,26,136	0/0:4,1:6:0,2,56
-chr21	22431129	chr21:22431129:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,0:5:14,0,100	0/1:4,3:10:114,0,85	0/0:5,0:7:0,15,155
-chr21	22431843	chr21:22431843:M	TTTTATTATCATTTTATTTTATTTTATTTT	<6.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:1,25:26:255,54,0	1/1:0,28:28:255,84,0	1/1:0,30:30:255,90,0
-chr21	22440522	chr21:22440522:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:22:255,45,0	0/1:16,11:30:104,0,218	1/1:1,17:19:255,38,0
-chr21	22445459	chr21:22445459:M	TCTCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,43:45:255,135,0	0/1:19,14:38:255,0,255	1/1:0,36:38:255,114,0
-chr21	22449053	chr21:22449053:M	TTTTTTTCTTTTTTTTGTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:28:255,83,0	0/1:15,10:28:115,0,194	1/1:1,43:44:255,111,0
-chr21	22456607	chr21:22456607:M	GTGTGTGTGTGTGT	<6>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,11:11:139,31,0	0/1:1,3:4:26,0,1	1/1:0,10:10:125,28,0
-chr21	22460603	chr21:22460603:M	ATATATATATATATAATTATATTTAAAAATATAATTATATATAT	<21>,<23>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,6,14:23:165,151,242,61,0,70	1/2:0,2,2:5:32,21,30,21,0,31	1/2:0,4,11:16:123,118,191,40,0,41
-chr21	22461339	chr21:22461339:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:170,18,0	0/1:0,2:3:48,0,4	1/1:0,7:9:216,24,0
-chr21	22481465	chr21:22481465:M	AAAAAAAAAAAAAAAGAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,15:16:255,255,236,48,46,0	2/2:0,1,14:19:255,249,209,47,33,0	1/2:0,3,8:12:216,117,88,36,0,13
-chr21	22508091	chr21:22508091:M	TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:18,0,23	0/0:5,0:5:0,15,83	0/1:5,3:8:28,0,61
-chr21	22511605	chr21:22511605:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,6:19:53,0,168	0/1:8,7:16:73,0,99	1/1:1,11:13:184,20,0
-chr21	22553830	chr21:22553830:M	ACACACACACACACACACATACACACTCATACACACAC	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,27:29:255,86,0	1/1:0,26:26:255,78,0	1/1:0,26:28:255,83,0
-chr21	22556100	chr21:22556100:M	TATATATATATATATATATATATATGTATATATATATGTATATATA	<19>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,28:30:255,89,0	1/1:0,14:14:255,42,0	1/1:0,11:12:255,36,0
-chr21	22558509	chr21:22558509:M	TTTTCTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:136,15,0	1/1:0,7:8:237,24,0	1/1:0,4:6:168,18,0
-chr21	22559635	chr21:22559635:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,4:6:154,68,51,34,0,17	1/2:0,3,5:8:202,82,59,49,0,26	1/2:0,1,3:4:102,50,39,17,0,5
-chr21	22562387	chr21:22562387:M	CACACACACACACACACAAACACACACACACACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,22:24:255,71,0	1/1:0,29:29:255,87,0
-chr21	22562733	chr21:22562733:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:11,4,0	1/1:0,0:2:7,2,0	1/1:0,3:4:91,11,0
-chr21	22563552	chr21:22563552:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:21:255,62,0	1/1:0,27:31:255,91,0	1/1:0,19:22:255,65,0
-chr21	22564127	chr21:22564127:M	TTTTTTTTTGTTTGTTTTGTTTTG	<5.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,30:30:255,90,0	1/1:0,32:32:255,96,0
-chr21	22567823	chr21:22567823:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,10:11:255,172,142,30,16,0	0/2:1,1,4:6:89,47,46,0,2,12	1/2:0,4,6:10:192,92,64,51,0,33
-chr21	22569707	chr21:22569707:M	AAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7,1:8:207,24,0,129,6,108	1/2:0,3,5:9:215,85,60,60,0,37	1/1:0,11,1:13:255,38,0,220,20,187
-chr21	22570428	chr21:22570428:M	GTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,34:35:255,105,0	1/1:0,39:39:255,117,0	1/1:0,28:29:255,87,0
-chr21	22575672	chr21:22575672:M	ATATATATATATAT	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,16:21:86,27,0	1/1:0,9:10:52,18,0	1/1:0,24:24:138,48,0
-chr21	22578639	chr21:22578639:M	AAAAAAAAAATAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,35:38:255,110,0	1/1:0,36:36:255,106,0
-chr21	22579088	chr21:22579088:M	TTTTTTTTTCTTTTTTTTCTTTTTCTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:1,25:26:255,59,0	1/1:0,21:21:255,62,0
-chr21	22587030	chr21:22587030:M	AAAAAAAAAAAAAGAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:43:255,126,0	1/1:1,26:30:255,67,0	1/1:0,38:39:255,114,0
-chr21	22593282	chr21:22593282:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:33:233,0,160	0/1:11,11:24:122,0,141	0/0:23,1:25:0,55,255
-chr21	22593864	chr21:22593864:M	AAAAAAAAAAAAAAAAAA	<17>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,2,3:10:58,44,114,0,52,162	0/0:2,0,0:3:0,9,46,6,42,57	0/1:11,4,0:16:23,0,158,67,192,255
-chr21	22602555	chr21:22602555:M	TATATATATATATATATATATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:6:139,15,0	1/1:0,6:7:177,21,0	1/1:0,25:25:255,75,0
-chr21	22612048	chr21:22612048:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,10:17:130,0,76	0/1:10,6:18:53,0,130	0/0:13,0:13:0,38,228
-chr21	22615153	chr21:22615153:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,4:6:94,58,52,28,0,13	1/1:0,3,0:4:101,12,0,72,12,62	1/2:0,1,3:5:68,42,39,17,0,5
-chr21	22615924	chr21:22615924:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:36:202,0,251	1/1:0,29:29:255,85,0	0/1:14,18:32:234,0,161
-chr21	22622798	chr21:22622798:M	ACACACACACACACACACACACACACACACA	<20.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,6,0,0:23:129,0,255,177,255,255,177,255,255,255	1/3:0,7,0,3:12:255,85,58,255,51,254,212,0,212,203	0/2:18,0,8,0:27:182,235,255,0,255,255,149,255,255,255
-chr21	22624464	chr21:22624464:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,22:37:255,0,174	1/1:0,37:37:255,109,0	0/1:18,18:37:232,0,222
-chr21	22629244	chr21:22629244:M	TATATATATACATATACACATATATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:8,15:24:255,0,172	1/1:0,28:28:255,84,0	0/1:7,13:20:255,0,132
-chr21	22631152	chr21:22631152:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23:39:255,0,189	1/1:0,36:36:255,106,0	0/1:25,26:51:255,0,255
-chr21	22633079	chr21:22633079:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,13:38:134,0,255	1/1:1,37:38:255,94,0	0/0:40,2:42:0,87,255
-chr21	22634146	chr21:22634146:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,9:27:86,0,252	1/1:2,24:27:255,44,0	0/0:23,1:26:0,48,255
-chr21	22634315	chr21:22634315:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	<11.5>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:9,11:20:123,0,90	0/0:24,1:25:0,57,255	1/1:0,27:27:255,79,0
-chr21	22634363	chr21:22634363:M	TAGATAGATAGATA	<2.5>,<4.5>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:27,18,0:45:208,0,255,255,255,255	1/2:0,23,19:42:255,255,255,255,0,255	0/0:53,0,0:53:0,156,255,156,255,255
-chr21	22642380	chr21:22642380:M	TTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:19:255,57,0	1/1:1,13:14:255,8,0	1/1:0,31:33:255,98,0
-chr21	22647136	chr21:22647136:M	TTTTCTTTTCTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:30:255,70,0	0/1:16,11:29:128,0,194	1/1:0,17:19:255,55,0
-chr21	22651065	chr21:22651065:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,7:21:255,122,82,114,0,76	1/2:0,12,4:18:255,76,29,201,0,153	2/2:0,0,18:22:255,255,255,55,44,0
-chr21	22651693	chr21:22651693:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,13:16:135,27,0	0/1:14,7:22:21,0,98	0/1:9,6:19:34,0,58
-chr21	22651706	chr21:22651706:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGTGTGTGTGTGT	<31.5>,<67.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,0,7:10:96,69,63,27,0,8	0/1:3,3,1:9:86,0,60,86,65,158	2/2:0,0,3:4:38,38,38,8,8,0
-chr21	22651754	chr21:22651754:M	TATATATATATATGTATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,2:2:25,6,0	0/0:10,1:11:0,21,255	1/1:0,3:3:37,8,0
-chr21	22651784	chr21:22651784:M	TGTGTGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,7:7:85,19,0	0/0:13,1:14:0,30,255	1/1:0,3:3:37,8,0
-chr21	22651794	chr21:22651794:M	TATATATATATATA	<5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:1,3,2:6:53,0,10,41,1,70	0/0:12,0,1:13:0,36,255,26,255,255	2/2:0,0,3:3:37,37,37,8,8,0
-chr21	22651807	chr21:22651807:M	ACACACACACACA	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:47,11,0	0/0:10,2:12:0,12,247	1/1:0,4:4:47,11,0
-chr21	22651863	chr21:22651863:M	ATATATATATA	<4.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,2:6:90,23,11,79,0,194	0/1:13,3,1:17:8,0,190,45,223,255	1/2:0,5,3:8:115,33,18,96,0,241
-chr21	22651885	chr21:22651885:M	ATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/0:15,1:18:0,28,255	1/1:0,6:8:124,21,0	0/0:25,1:29:0,58,255
-chr21	22651933	chr21:22651933:M	GTGTGTGTGTGT	<5>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,3,7:10:110,74,65,44,0,54	0/1:7,2,1:10:3,0,77,19,92,220	1/2:0,6,3:9:103,31,14,88,0,141
-chr21	22651944	chr21:22651944:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,2:2:25,6,0	0/0:9,1:11:0,20,246	1/1:0,3:3:36,8,0
-chr21	22651959	chr21:22651959:M	ACACACACACACACACACACACACACACACATACACACA	<14>,<16>,<67.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,4,0,4:8:154,43,31,136,43,127,111,0,93,100	0/1:8,4,0,2:18:76,0,223,73,207,255,87,213,255,255	1/2:1,8,6,4:20:255,114,98,179,0,165,255,95,159,255
-chr21	22675107	chr21:22675107:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<12.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,11:17:255,9,0	1/1:0,13:17:255,43,0
-chr21	22675946	chr21:22675946:M	AAAAAAAAAAAAGAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,21:22:255,46,0	0/1:18,15:34:173,0,218	0/1:16,20:37:255,0,183
-chr21	22680392	chr21:22680392:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:4,26:31:255,10,0	1/1:1,29:31:255,73,0	1/1:3,32:35:255,49,0
-chr21	22702028	chr21:22702028:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,6,78	0/1:4,3:8:39,0,45	0/0:7,1:8:0,6,104
-chr21	22721717	chr21:22721717:M	TTATTATTATTATTATTATTATTATTATTATT	<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:9,10:20:219,0,193	0/0:17,0:17:0,51,255	0/1:10,12:22:255,0,211
-chr21	22742290	chr21:22742290:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:14:28,0,123	0/1:9,3:15:16,0,126	0/0:9,0:10:0,29,161
-chr21	22743177	chr21:22743177:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:22:255,60,0	1/1:1,29:34:255,65,0	1/1:0,25:31:255,78,0
-chr21	22771546	chr21:22771546:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,11:12:177,17,0	0/1:1,3:5:48,0,3	1/1:2,9:12:132,0,0
-chr21	22788715	chr21:22788715:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,3,12	1/1:0,5:9:195,24,0	0/0:1,0:1:0,3,31
-chr21	22794798	chr21:22794798:M	AAAGAGAAAGAGAAGGAGACGAGAGAGAGATAGATAGAGAGAGAGAGAGAGAGAAAGACAAAGAAAAAGAAAAAGAAAGAAAAAGA	<13>	.	.	Motif=AAAGAG	GT:AD:DP:PL	1/1:0,3:4:68,9,0	1/1:0,7:9:171,24,0	1/1:0,4:7:84,7,0
-chr21	22800510	chr21:22800510:M	TATATATACATATATATATATATAT	<15.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:4,9:16:239,0,110	0/0:15,0:21:0,63,255	0/1:12,5:19:116,0,255
-chr21	22800534	chr21:22800534:M	TTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,0,2:17:27,37,255,0,255,255	1/2:0,3,5:10:201,70,47,42,0,17	0/2:6,1,7:16:165,81,214,0,141,132
-chr21	22807992	chr21:22807992:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/0:21,1:25:0,52,255	0/0:21,1:23:0,50,255	0/1:16,8:24:70,0,212
-chr21	22810958	chr21:22810958:M	GAAGGAAGGAAAGAAGGAAGGAAGGGAGGGAGGGAGGGCAGAGAGAAAGAAGGAAGGGAGGAAGGAAGGAAGGAAG	<20>	.	.	Motif=GAAG	GT:AD:DP:PL	1/1:0,3:3:43,9,0	0/0:3,0:4:0,11,54	1/1:0,6:9:84,17,0
-chr21	22815228	chr21:22815228:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,35:36:255,255,255,106,108,0	1/2:1,21,16:39:255,255,255,255,0,255	2/2:1,0,38:39:255,255,255,96,114,0
-chr21	22817959	chr21:22817959:M	AGAGAGAGAGAGA	<8>,<9.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,18,8:26:255,145,68,255,0,247	0/1:17,20,8:46:255,0,169,154,156,255	1/1:1,23,4:34:255,75,0,255,24,255
-chr21	22825191	chr21:22825191:M	TATATATATATATATATATATATATATATAT	<7.5>,<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,25,20:45:255,255,225,255,0,255	0/2:5,1,17:24:255,255,255,0,123,87	1/2:0,19,22:41:255,255,255,255,0,211
-chr21	22825362	chr21:22825362:M	ACACACACACACACACACACACACACACACA	<16.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,15,10:28:255,255,232,253,0,255	0/2:11,0,8:21:188,223,255,0,198,255	1/2:1,14,10:25:255,247,220,229,0,255
-chr21	22825758	chr21:22825758:M	ACACACACACA	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,26:52:255,0,255	0/1:19,21:40:255,0,228	0/1:23,20:43:252,0,255
-chr21	22832286	chr21:22832286:M	AAAAAACAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:38:232,0,255	0/1:17,18:35:221,0,201	0/1:23,20:43:246,0,255
-chr21	22832328	chr21:22832328:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	0/1:26,22:49:255,0,255	1/1:1,39:40:255,100,0
-chr21	22834374	chr21:22834374:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,19:21:255,25,0	0/0:24,0:24:0,70,255	1/1:1,20:21:255,44,0
-chr21	22837419	chr21:22837419:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,13:26:112,0,66	0/1:8,14:28:129,0,46	0/0:15,2:17:0,22,162
-chr21	22845624	chr21:22845624:M	ATATATATATATATATAT	<10>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,15:31:193,0,210	0/1:26,13:41:121,0,255	1/1:0,40:40:255,118,0
-chr21	22879455	chr21:22879455:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:9,0,27	0/1:7,2:11:13,0,98	1/1:0,8:10:158,29,0
-chr21	22886743	chr21:22886743:M	TATATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:10:105,26,0	.	.
-chr21	22889371	chr21:22889371:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,23:42:255,0,232	0/1:25,19:44:208,0,255	1/1:1,35:36:255,88,0
-chr21	22889807	chr21:22889807:M	GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTATGTGTATGTG	<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,12:25:150,0,170	0/1:10,14:24:177,0,106	0/1:18,15:33:177,0,232
-chr21	22890571	chr21:22890571:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAA	<34>,<36>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,8,3,0:15:110,29,43,101,0,177,136,45,199,255	0/1:3,7,1,0:15:67,0,20,84,21,174,96,42,194,244	2/3:1,0,6,3:11:118,139,205,28,39,14,54,83,0,68
-chr21	22898463	chr21:22898463:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,20:30:255,0,101	0/1:14,14:29:175,0,166	1/1:0,25:26:255,76,0
-chr21	22899484	chr21:22899484:M	TCTATATATCTATCTATCTATCTATCTATCTATCTATCGATCTATCTATCTACCTATC	<15.5>,<16.5>,<17.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:3,6,3,0:12:65,0,1,19,0,66,67,28,95,177	1/2:0,5,6,0:11:151,65,36,43,0,25,120,51,55,142	1/3:5,6,0,5:18:126,69,84,67,68,140,9,0,108,153
-chr21	22902958	chr21:22902958:M	AAAAAAAAAAAAAAAAAAAGAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,93	0/0:1,0:1:0,3,17	0/1:2,5:7:65,0,14
-chr21	22903820	chr21:22903820:M	ATAGATAGATAGATAGATAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAG	<13.8>,<16.8>	.	.	Motif=ATAG	GT:AD:DP:PL	1/2:0,15,3:18:255,81,36,255,0,255	1/2:0,9,7:16:255,187,160,235,0,218	1/1:0,19,0:19:255,57,0,255,57,255
-chr21	22905669	chr21:22905669:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:0,37:37:255,109,0	1/1:0,28:28:255,83,0
-chr21	22906103	chr21:22906103:M	ATATATATATATATATATATAT	<11.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,17,0,6:30:210,148,121,159,78,255,87,0,255,255	1/2:2,7,10,0:21:214,178,165,14,0,166,131,115,211,255	1/3:0,9,0,9:25:241,202,189,139,99,255,49,0,220,255
-chr21	22924336	chr21:22924336:M	AAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:210,26,0	0/1:1,1:2:22,0,23	1/1:0,5:10:201,27,0
-chr21	22924349	chr21:22924349:M	ATATATATATATATATATATA	<11>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:10,0,10:21:199,199,245,0,85,196	0/2:2,0,0:5:6,10,22,0,17,38	1/2:1,4,7:12:170,131,117,25,0,69
-chr21	22935687	chr21:22935687:M	TTTTATTTTAT	<1.4>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,2:3:54,6,0	1/1:0,3:3:81,9,0	.
-chr21	22935695	chr21:22935695:M	TATATATATATATATATATATATATATATATCTAGTATATATA	<18.5>,<19.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/3:0,9,0,7:17:255,115,173,255,202,255,255,0,158,248	1/3:0,0,0,1:2:24,16,26,26,29,38,11,0,10,8	2/3:0,0,5,1:6:143,96,94,16,28,13,135,81,0,138
-chr21	22940332	chr21:22940332:M	TACATAGACTATATATATATATATACATATACA	<5.2>	.	.	Motif=TACATA	GT:AD:DP:PL	1/1:0,32:33:255,96,0	1/1:0,29:29:255,87,0	0/1:23,17:40:255,0,255
-chr21	22950542	chr21:22950542:M	TTTTTTTTTTTTTTT	<13>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,27:28:255,255,255,64,84,0	2/2:1,0,23:28:255,255,255,64,83,0	1/2:0,19,18:39:255,255,255,255,0,255
-chr21	22951905	chr21:22951905:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/0:30,0:32:0,91,255	0/1:13,27:43:255,0,121
-chr21	22952682	chr21:22952682:M	TGTGTGTGTGT	<3.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,39:39:255,117,0	0/1:19,13:32:255,0,255
-chr21	22952822	chr21:22952822:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<19.5>,<20.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,23,0:24:255,67,0,255,68,255	1/1:1,18,0:22:255,10,0,255,57,255	1/2:1,7,12:21:255,196,157,88,0,78
-chr21	22972340	chr21:22972340:M	ATATATACATATATATAT	<12.5>,<13.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,5,12,8:30:255,217,140,98,0,23,203,18,9,146	1/2:0,3,5,3:13:255,88,52,55,0,19,112,11,20,85	1/3:0,10,0,11:25:255,253,198,248,132,189,215,0,109,162
-chr21	22972357	chr21:22972357:M	TTTTTTTTTTTTTTTT	<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,9,7:20:255,177,163,117,0,233	0/2:6,0,5:12:112,129,197,0,84,144	1/1:1,23,0:31:255,65,0,255,84,255
-chr21	22976433	chr21:22976433:M	TAGATAGATAGATAGATAGATAGATAG	<9.8>,<10.8>	.	.	Motif=TAGA	GT:AD:DP:PL	1/2:0,14,10:24:255,179,110,250,0,182	2/2:0,0,16:16:255,255,255,48,47,0	1/1:0,19,0:19:255,57,0,255,56,255
-chr21	22977752	chr21:22977752:M	ACACACACACACACACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,12:31:123,0,220	0/1:15,8:23:68,0,186	0/1:13,7:20:63,0,167
-chr21	22991104	chr21:22991104:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,80,0	1/1:0,33:35:255,99,0	0/1:18,9:31:185,0,255
-chr21	23011953	chr21:23011953:M	AGAGAGACAGAGAGAGGAGGGAGAGAGAGAGAGAGAGGAGAGAG	<24>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,18:19:255,54,0	1/1:0,19:19:255,57,0	0/1:14,6:20:109,0,255
-chr21	23012986	chr21:23012986:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,8:16:112,0,48	0/1:6,2:8:10,0,79	0/1:4,3:8:38,0,47
-chr21	23016025	chr21:23016025:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,16:34:202,0,209	0/1:23,11:36:109,0,255	1/1:1,42:46:255,116,0
-chr21	23016132	chr21:23016132:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,13:41:127,0,255	0/1:14,18:32:230,0,157	0/1:24,24:48:255,0,255
-chr21	23017712	chr21:23017712:M	TTTTTTTTTTTGTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,10:24:255,255,223,255,0,255	1/2:0,16,11:30:255,255,255,255,0,255	0/1:17,10,0:28:239,0,255,255,255,255
-chr21	23019855	chr21:23019855:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,17:43:199,0,255	0/1:16,19:36:240,0,176	0/0:42,0:44:0,129,255
-chr21	23020514	chr21:23020514:M	AAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,10:24:76,0,92	0/1:19,6:30:7,0,194	0/0:32,0:37:0,91,255
-chr21	23021316	chr21:23021316:M	CCCCCCCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	2/2:0,0,3:3:94,56,48,9,9,0	1/1:0,5,0:6:175,18,0,106,17,90	2/2:0,0,4:6:138,76,62,16,4,0
-chr21	23022631	chr21:23022631:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,42:43:255,108,0	1/1:0,46:46:255,135,0	0/1:19,23:42:255,0,231
-chr21	23028073	chr21:23028073:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,6,8:14:255,116,98,103,0,63	1/2:0,9,4:14:255,55,26,156,0,120	0/1:7,6,0:13:130,0,159,100,117,183
-chr21	23029660	chr21:23029660:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:34,0,25	.	1/1:0,3:3:50,9,0
-chr21	23032661	chr21:23032661:M	TTTGTTTTTCTGTTTTTTGTTTGTTTGTTTGTTT	<6.5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:2,0:4:0,12,76	0/1:3,3:11:79,0,69	1/1:0,4:4:90,12,0
-chr21	23032878	chr21:23032878:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,1,15:24:224,209,255,0,101,63	0/2:10,1,13:24:169,175,255,0,156,106	1/2:0,20,13:33:255,199,139,255,0,255
-chr21	23033778	chr21:23033778:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:35,15:50:133,0,255	0/0:44,0:44:0,129,255	0/0:52,1:53:0,138,255
-chr21	23036584	chr21:23036584:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,3,6:19:120,60,181,0,122,221	0/2:9,1,6:18:119,87,215,0,156,231	1/2:0,4,8:12:255,141,108,60,0,36
-chr21	23055398	chr21:23055398:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,34:34:255,100,0	0/1:9,27:36:255,0,60
-chr21	23055425	chr21:23055425:M	AGAAAAGAAAAAAAA	<2.8>	.	.	Motif=AGAAA	GT:AD:DP:PL	1/1:0,32:32:255,94,0	1/1:0,32:33:255,97,0	1/1:1,28:30:255,61,0
-chr21	23056893	chr21:23056893:M	CTTTCTTTCTTTCTTT	<5>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:17,0:17:0,47,217	0/0:18,0:18:0,50,224	0/1:8,11:20:95,0,45
-chr21	23056906	chr21:23056906:M	TTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:33,3,0	1/1:0,3:5:92,9,0	0/1:11,2:13:22,0,255
-chr21	23062061	chr21:23062061:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:132,15,0	1/1:0,5:6:139,7,0	0/1:7,3:11:56,0,192
-chr21	23064939	chr21:23064939:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:13:0,38,217	0/0:16,1:19:0,39,255	0/1:3,3:9:26,0,53
-chr21	23071073	chr21:23071073:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,50:51:255,132,0	1/1:0,36:36:255,106,0	1/1:0,45:45:255,133,0
-chr21	23072542	chr21:23072542:M	TTTTTTTTTTTTTTT	<16>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,15,0:20:255,227,182,43,21,0,245,180,40,222	1/2:1,7,5,0:13:170,54,31,63,0,70,148,55,104,221	2/3:0,0,8,6:14:255,252,222,84,82,43,110,89,0,71
-chr21	23074392	chr21:23074392:M	AAATTAAATTAATAAATTAAATTATTATTAATTAATTAAATTA	<7.8>	.	.	Motif=AAATT	GT:AD:DP:PL	1/1:0,20:25:255,62,0	1/1:0,10:12:255,31,0	1/1:0,11:14:255,33,0
-chr21	23081511	chr21:23081511:M	TTTGTTTGTTTGCTTGTTTGTTTTTTGT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/0:27,0:27:0,81,255	0/1:19,18:37:255,0,255
-chr21	23083054	chr21:23083054:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:34:0,100,255	0/0:30,0:31:0,91,255	0/1:19,22:43:255,0,240
-chr21	23086950	chr21:23086950:M	TTTTTCTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:29:0,84,255	0/0:18,0:19:0,55,255	0/1:15,11:27:105,0,182
-chr21	23087957	chr21:23087957:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,93,0	1/1:2,24:28:255,46,0	1/1:1,40:43:255,108,0
-chr21	23088060	chr21:23088060:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:45,1:46:0,117,255	0/1:16,14:30:168,0,206
-chr21	23098465	chr21:23098465:M	ACACACACACATACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:39,0:39:0,115,255	0/1:15,19:34:255,0,183
-chr21	23101985	chr21:23101985:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,63,0	1/1:0,14:16:255,42,0	0/1:10,8:23:167,0,209
-chr21	23105277	chr21:23105277:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,48:49:255,144,0	1/1:0,28:30:255,87,0	0/1:24,26:51:255,0,255
-chr21	23107329	chr21:23107329:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:38,0:38:0,112,255	0/1:21,27:48:255,0,253
-chr21	23115298	chr21:23115298:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,26:28:255,83,0	1/1:0,28:32:255,94,0
-chr21	23125620	chr21:23125620:M	TTTTTCTTTTTTTTTGTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,19:28:255,0,91	1/1:1,36:37:255,91,0	0/1:21,25:46:255,0,255
-chr21	23128903	chr21:23128903:M	TTTTGTTTTTATTTTGTTTTGTTTTGTTTTGTTTTTGTTTT	<10.2>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:15,8:23:145,0,255	1/1:0,20:20:255,60,0	0/1:8,7:15:145,0,170
-chr21	23139975	chr21:23139975:M	AAAAAAATAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,10:27:112,0,244	1/1:0,39:39:255,115,0	0/1:16,24:41:255,0,186
-chr21	23151602	chr21:23151602:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,3:12:19,0,118	0/0:18,0:20:0,58,255	0/1:11,4:17:21,0,165
-chr21	23169907	chr21:23169907:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,14:38:153,0,255	1/1:0,34:35:255,102,0	0/1:28,13:41:118,0,255
-chr21	23173559	chr21:23173559:M	TATATATATATATATATATATATA	<14>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:13:233,24,0	1/1:0,0:2:30,6,0	1/1:0,3:5:88,9,0
-chr21	23198691	chr21:23198691:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGTTTTTGTGTGTGTGTG	<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,9:13:212,0,69	1/1:0,22:22:255,66,0	0/1:8,9:18:208,0,164
-chr21	23198925	chr21:23198925:M	AACAACAACAACAA	<3.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:17,22:39:255,0,255	1/1:0,34:34:255,102,0	0/1:18,20:38:255,0,255
-chr21	23204441	chr21:23204441:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<20>,<23>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,6,3:9:219,74,56,145,0,136	1/1:0,1,0:1:28,3,0,28,3,28	.
-chr21	23222767	chr21:23222767:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:29:255,85,0	1/1:0,24:24:255,70,0	1/1:3,26:32:255,40,0
-chr21	23225544	chr21:23225544:M	TATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,37:38:255,102,0	1/1:0,19:19:255,57,0	1/1:0,28:28:255,84,0
-chr21	23226847	chr21:23226847:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:33:185,0,240	1/1:0,40:40:255,118,0	0/1:17,29:47:255,0,183
-chr21	23231341	chr21:23231341:M	GCTAAGCTAAG	<1.8>	.	.	Motif=GCTAA	GT:AD:DP:PL	0/1:19,24:43:255,0,255	0/0:49,0:49:0,147,255	0/1:16,27:43:255,0,255
-chr21	23242236	chr21:23242236:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<13>,<14>,<16>	.	.	Motif=AG	GT:AD:DP:PL	1/3:0,12,5,4:22:255,48,53,108,20,83,255,0,68,255	2/3:0,0,16,6:23:255,222,253,59,105,48,255,152,0,241	1/2:0,13,12,5:33:255,101,85,104,0,55,255,34,51,255
-chr21	23242269	chr21:23242269:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,5:16:84,0,231	1/1:0,19:26:255,44,0	0/1:12,4:20:65,0,255
-chr21	23243414	chr21:23243414:M	TATATTTATATGTGTAAATGTATATATATATTTATATGTGTAAATGTATATATATATTTATAT	<2.2>,<6.2>	.	.	Motif=TATATT	GT:AD:DP:PL	1/2:1,9,4:24:255,153,124,255,0,255	1/2:0,1,3:6:164,94,85,70,0,60	1/2:3,5,6:20:255,173,210,223,0,255
-chr21	23257660	chr21:23257660:M	ATATATATATA	<4.5>,<7.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,1,20:25:255,255,255,45,32,0	1/2:0,11,17:33:255,255,255,113,0,192	2/2:0,1,15:21:255,255,255,35,35,0
-chr21	23257670	chr21:23257670:M	ACACACACACACACACACACACACACACACACACACACACACACATATACACACACACATATATATACACACACACACACACACACA	<41.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:6:96,15,0	1/1:0,3:4:61,9,0	0/1:0,0:1:0,0,0
-chr21	23266223	chr21:23266223:M	ACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:3,19:22:255,15,0	1/1:1,24:25:255,57,0	1/1:0,8:9:130,23,0
-chr21	23273075	chr21:23273075:M	ATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	1/1:5,36:41:255,26,0	1/1:2,48:51:255,114,0	1/1:1,48:50:255,129,0
-chr21	23274906	chr21:23274906:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12,0:14:209,23,0,244,39,255	1/1:0,11,0:13:209,37,0,239,38,255	1/2:4,4,7:15:90,61,161,10,0,82
-chr21	23275272	chr21:23275272:M	GTGCACGTGCAC	<1.7>	.	.	Motif=GTGCAC	GT:AD:DP:PL	1/1:0,9:9:234,27,0	1/1:0,14:14:255,42,0	0/1:19,5:24:58,0,255
-chr21	23275281	chr21:23275281:M	CACACACACACACACACACACACACACACACACACACGCACA	<15>,<17>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,42:45:255,255,255,135,129,0	2/2:0,0,26:26:255,255,255,78,78,0	1/2:0,17,16:34:255,255,255,255,0,255
-chr21	23282834	chr21:23282834:M	TTATTTTATTTTTTTTA	<3.6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:39,0:39:0,117,255	0/0:18,0:18:0,54,255	0/1:20,18:38:255,0,255
-chr21	23284448	chr21:23284448:M	ACACACACACACACACACACACACACACA	<12.5>,<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39,2:42:255,118,0,255,87,255	1/1:0,39,2:42:255,120,0,255,90,255	1/2:1,22,13:38:255,156,111,255,0,254
-chr21	23286586	chr21:23286586:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:39:255,95,0	1/1:1,44:45:255,115,0	1/1:0,43:44:255,129,0
-chr21	23291206	chr21:23291206:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:12:86,0,34	1/1:1,7:8:98,7,0	1/1:1,4:6:58,0,0
-chr21	23296677	chr21:23296677:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/0:26,3:29:0,32,255	0/1:20,30:50:255,0,222
-chr21	23297320	chr21:23297320:M	TAGGTAGGTAGGTAGGTAGGTAGGTAGGTAG	<6.8>	.	.	Motif=TAGG	GT:AD:DP:PL	1/1:0,28:29:255,83,0	1/1:1,30:34:255,80,0	1/1:0,19:26:255,63,0
-chr21	23297348	chr21:23297348:M	TAGATAGATAGATAGATAGAAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGAT	<16.8>,<19.8>	.	.	Motif=TAGA	GT:AD:DP:PL	0/2:5,0,4:9:81,98,166,0,77,108	0/0:16,0,0:17:0,49,254,48,255,255	1/2:0,5,6:11:205,147,138,76,0,110
-chr21	23298313	chr21:23298313:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:13:179,20,0	1/1:1,10:12:161,18,0	0/1:8,8:19:107,0,86
-chr21	23299937	chr21:23299937:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:1,38:41:255,102,0	1/1:2,29:32:255,58,0
-chr21	23302016	chr21:23302016:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:15:0,43,252	0/1:4,3:8:38,0,45	0/1:4,4:10:62,0,41
-chr21	23302187	chr21:23302187:M	TTTTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:175,21,0	1/1:0,6:6:179,18,0	1/1:0,9:9:255,27,0
-chr21	23313960	chr21:23313960:M	ATGTATGTATGTATGTATGTATGTATGTATGTAT	<9.5>	.	.	Motif=ATGT	GT:AD:DP:PL	0/0:11,2:23:0,30,168	0/1:7,6:17:25,0,63	0/1:6,10:22:67,0,39
-chr21	23313991	chr21:23313991:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTGTCTGTCTAGCTATC	<15.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:8,6:14:106,0,162	1/1:0,18:18:255,54,0	0/0:14,0:14:0,42,255
-chr21	23317226	chr21:23317226:M	ATATTATATTATATTATATTATA	<7.6>,<8.6>	.	.	Motif=ATATT	GT:AD:DP:PL	1/2:0,10,12:22:255,231,170,193,0,131	2/2:0,0,3:3:90,63,55,9,9,0	0/1:24,9,0:33:169,0,255,168,255,255
-chr21	23317324	chr21:23317324:M	ACACACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:26,2:28:0,44,255	0/0:23,1:24:0,52,255	0/1:8,13:21:178,0,85
-chr21	23319544	chr21:23319544:M	ATATATATATATGTATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,51:51:255,150,0	1/1:0,42:42:255,124,0
-chr21	23337081	chr21:23337081:M	CTCTTCTCTCTCTCTCTCTCTGTCTTTCTCTCT	<15.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,23:25:255,66,0	1/1:0,35:41:255,103,0	1/1:0,39:43:255,112,0
-chr21	23344054	chr21:23344054:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:9:122,9,0	0/1:3,2:6:19,0,35	1/1:0,4:5:69,12,0
-chr21	23347928	chr21:23347928:M	ATATATATATATATATATATATATA	<10.5>,<14.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:1,9,2,11:26:255,255,255,255,129,255,218,0,239,230	1/2:0,15,2,0:18:255,47,6,255,0,255,255,26,255,255	2/3:0,0,7,7:14:255,255,255,96,96,54,94,96,0,54
-chr21	23348086	chr21:23348086:M	GTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/1:11,8:19:196,0,253	0/1:11,10:24:255,0,238	0/0:23,0:24:0,72,255
-chr21	23349529	chr21:23349529:M	ATATATATATACATATATATATACACACATATATAATATAAATATATATTTATAATTATATAAATATATA	<5>,<21.5>,<22.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,2,5,6:14:248,198,217,62,34,55,48,20,0,41	1/2:1,3,3,0:7:123,48,64,53,0,69,94,41,78,111	1/3:0,2,0,10:12:255,246,240,191,140,163,51,0,49,21
-chr21	23350532	chr21:23350532:M	TATATTTATAGTTATATGAATATATCTAATATATATTTATAGTTATAT	<2.8>	.	.	Motif=TATATT	GT:AD:DP:PL	0/1:8,13:21:255,0,129	.	0/1:2,5:7:123,0,27
-chr21	23355503	chr21:23355503:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,56,0	1/1:2,9:12:130,1,0	1/1:0,16:17:255,50,0
-chr21	23356968	chr21:23356968:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,1:12:0,6,208	0/0:11,1:15:0,5,255	0/1:12,5:19:82,0,252
-chr21	23367655	chr21:23367655:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:17,1,13,0:31:255,220,255,0,255,255,248,255,255,255	1/2:0,10,12,0:22:255,210,146,176,0,111,255,177,174,255	0/3:5,1,0,13:19:184,205,255,188,255,255,0,63,79,37
-chr21	23371763	chr21:23371763:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<25>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:11,17,56,0,17,11	1/2:0,4,3:8:162,49,70,122,0,113	0/2:1,0,0:3:16,21,51,0,17,8
-chr21	23385554	chr21:23385554:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,43:43:255,127,0	1/1:0,55:55:255,162,0
-chr21	23388243	chr21:23388243:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:31:0,90,255	0/1:15,10:25:228,0,255	0/0:33,1:42:0,87,255
-chr21	23396673	chr21:23396673:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:18,0,4:22:49,73,255,0,255,255	0/0:35,1,0:36:0,88,255,105,255,255	1/2:0,16,14:30:255,253,170,250,0,208
-chr21	23401019	chr21:23401019:M	AAAAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,16:29:243,0,82	0/0:33,3:36:0,53,255	1/1:1,20:22:255,46,0
-chr21	23401344	chr21:23401344:M	TTAAAATTAAAA	<1.3>	.	.	Motif=TTAAAA	GT:AD:DP:PL	0/1:15,5:20:56,0,255	0/0:20,1:22:0,43,255	0/0:17,0:18:0,54,255
-chr21	23404278	chr21:23404278:M	CTTTTCTTTTTCCTTTT	<2.2>	.	.	Motif=CTTTTC	GT:AD:DP:PL	0/1:22,15:37:255,0,255	0/1:19,6:25:79,0,255	0/1:18,11:29:189,0,255
-chr21	23404291	chr21:23404291:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,12:24:255,186,152,199,0,134	2/2:1,1,21:23:255,255,255,50,50,0	1/2:1,15,14:30:255,193,173,250,0,181
-chr21	23404753	chr21:23404753:M	AACAAACAAACAAACAAACAAACAAACAAAACAAACAAACAAAAAACCAAAGCCAAAACAAACAAACAAACAAAAAACA	<18.8>	.	.	Motif=AACA	GT:AD:DP:PL	1/1:0,11:11:211,33,0	1/1:0,10:10:180,29,0	1/1:0,18:18:255,53,0
-chr21	23418946	chr21:23418946:M	AAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,22:33:255,0,108	0/0:27,0:28:0,82,255	0/1:11,9:21:110,0,139
-chr21	23419977	chr21:23419977:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,16:19:255,1,0	0/1:2,1:3:16,0,43	1/1:0,9:9:236,27,0
-chr21	23424170	chr21:23424170:M	AATAATAATAATAATAATAATAATAATAATAATAATAATA	<10.3>,<12.3>,<15.3>	.	.	Motif=AAT	GT:AD:DP:PL	1/3:0,10,0,8:18:255,222,195,255,225,255,255,0,255,255	1/1:0,11,0,0:11:255,33,0,255,33,255,255,33,255,255	2/3:0,0,13,6:19:255,255,255,165,169,130,237,255,0,255
-chr21	23428356	chr21:23428356:M	AAAAAAAAAAAAAAAAAAACAAAAAAAAA	<23>,<28>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:3:47,54,74,9,9,0	1/2:0,11,6:17:255,98,124,255,0,255	.
-chr21	23430740	chr21:23430740:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<17.5>,<22.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,6,1,5:13:255,255,255,121,136,115,255,255,111,255,157,170,0,145,155	0/1:3,9,0,1,2:15:220,0,66,233,93,255,220,24,255,245,181,40,255,205,255	2/3:0,0,10,8,0:18:255,255,255,97,215,185,255,255,0,240,255,255,215,255,255
-chr21	23436375	chr21:23436375:M	CACACACATGCACACACACACACACACACACACACACAC	<18.5>,<22.5>,<23.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,4,3:8:170,164,163,30,20,14,41,31,0,25	2/3:0,0,1,1:2:51,52,53,11,11,5,11,11,0,5	1/3:1,3,0,3:8:104,82,83,64,42,124,22,0,92,82
-chr21	23436417	chr21:23436417:M	ATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,9:11:138,26,0	1/1:0,1:2:15,3,0	1/1:0,1:2:15,3,0
-chr21	23436626	chr21:23436626:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTCTCTCCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	<33.5>,<35.5>	.	.	Motif=TC	GT:AD:DP:PL	0/2:5,0,4:9:43,68,173,0,72,60	1/2:0,3,2:7:84,32,35,66,0,85	0/0:4,0,0:4:0,12,68,12,68,68
-chr21	23437627	chr21:23437627:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,24:49:255,0,255	0/1:20,22:43:255,0,255	0/1:18,20:42:255,0,255
-chr21	23439124	chr21:23439124:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,34:39:255,77,0	1/1:1,35:39:255,94,0	0/1:17,20:38:255,0,191
-chr21	23439503	chr21:23439503:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,84,0	1/1:0,45:46:255,138,0	0/1:10,21:34:255,0,182
-chr21	23441622	chr21:23441622:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,3,6:9:241,238,236,102,102,77,52,52,0,25	2/3:0,0,5,9:15:255,255,255,156,156,115,83,83,0,39	1/3:0,5,2,6:14:255,182,163,211,67,185,148,0,110,124
-chr21	23447303	chr21:23447303:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,26:52:255,0,255	0/1:26,18:45:187,0,255	1/1:2,35:38:255,75,0
-chr21	23449337	chr21:23449337:M	TATTTATTTATTT	<2.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/0:54,0:54:0,160,255	0/0:35,0:35:0,103,255	0/1:26,19:45:234,0,255
-chr21	23450276	chr21:23450276:M	ATATATATATATATATATATGTATAT	<15>,<19>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,16,9:27:255,241,201,255,0,255	1/2:0,6,1:8:198,40,22,163,0,163	2/2:0,0,2:3:62,62,62,6,6,0
-chr21	23457242	chr21:23457242:M	AAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:90,0,8	0/1:3,9:13:189,0,37	1/1:1,9:10:200,4,0
-chr21	23457561	chr21:23457561:M	TTTTTTTTTTTTTT	<13>,<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,10,0,3:15:255,124,94,255,124,255,183,0,255,255	1/3:2,22,0,6:32:255,153,115,255,184,255,255,0,255,255	2/3:1,0,12,5:19:255,255,255,160,176,140,196,255,0,255
-chr21	23469329	chr21:23469329:M	AAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:17:83,0,102	0/0:12,0:14:0,38,217	1/1:2,14:16:214,11,0
-chr21	23470007	chr21:23470007:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:17,10:28:91,0,224	0/0:25,3:28:0,28,255
-chr21	23475349	chr21:23475349:M	ATATATATATATATATATATATATATATATAT	<10>,<25>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:6:111,111,111,11,11,0	.	1/1:0,14,0:15:255,45,0,255,45,255
-chr21	23477802	chr21:23477802:M	TGTGTGTGTGTGTGTGTGTGTGT	<9.5>,<10.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,2,33:35:255,255,255,103,65,0	1/2:0,8,12:20:255,182,158,142,0,86	2/2:0,0,24:24:255,255,255,71,71,0
-chr21	23486142	chr21:23486142:M	CAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAAAAAACCAAAACA	<9.4>	.	.	Motif=CAAAA	GT:AD:DP:PL	0/1:6,10:21:113,0,39	0/0:18,0:24:0,51,255	1/1:0,22:25:255,63,0
-chr21	23490881	chr21:23490881:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:5:106,29,20,52,0,38	1/2:0,1,4:5:81,55,52,17,0,2	1/1:0,2,0:5:80,12,0,62,12,56
-chr21	23493519	chr21:23493519:M	TTGTCTTGTCTTG	<1.6>	.	.	Motif=TTGTC	GT:AD:DP:PL	0/1:11,25:36:255,0,202	0/0:25,0:25:0,75,255	1/1:0,47:47:255,141,0
-chr21	23501439	chr21:23501439:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:26:124,0,177	0/0:24,2:27:0,34,255	1/1:0,24:26:255,73,0
-chr21	23501644	chr21:23501644:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,17:46:188,0,255	0/0:39,3:42:0,69,255	1/1:1,22:23:255,49,0
-chr21	23502144	chr21:23502144:M	TGTGTGGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGT	<27>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,11:25:151,0,111	0/0:16,0:20:0,53,255	0/1:7,6:19:75,0,90
-chr21	23509554	chr21:23509554:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<21>,<23>	.	.	Motif=GT	GT:AD:DP:PL	0/2:12,0,11,0:23:129,194,255,0,180,147,195,255,213,255	0/3:7,0,0,5:12:113,134,232,130,229,226,0,118,118,180	1/2:0,17,10,0:27:255,171,211,255,0,255,255,255,255,255
-chr21	23512654	chr21:23512654:M	ATATATATATATATATATATATATATATATATTATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,6:7:82,17,0	.	1/1:0,1:1:14,3,0
-chr21	23521581	chr21:23521581:M	ATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT	<12.7>,<15.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:12,5,0:17:98,0,255,135,224,255	0/2:1,0,3:4:42,53,107,0,18,6	0/1:9,6,0:16:134,0,219,165,167,255
-chr21	23536884	chr21:23536884:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:17:0,29,240	0/0:16,1:20:0,38,255	0/1:13,15:28:177,0,143
-chr21	23538512	chr21:23538512:M	AAATAAATAAAATAAATAAAT	<5.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:1,37:39:255,78,0	1/1:1,30:34:228,59,0	0/1:20,13:34:24,0,87
-chr21	23548261	chr21:23548261:M	AGAAAAAGAAAAAAAAAAAGA	<3.7>	.	.	Motif=AGAAAA	GT:AD:DP:PL	0/0:26,2:29:0,41,255	0/1:18,13:31:197,0,255	0/0:28,0:29:0,85,255
-chr21	23559406	chr21:23559406:M	AAACAAACAAACAAACAAACAAACAAACAAAAAAC	<7.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:15,10:25:120,0,217	1/1:0,28:28:255,82,0	0/0:17,0:17:0,50,255
-chr21	23559955	chr21:23559955:M	TTTTTATTTGTTTTTTTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,21:40:255,255,255,255,0,255	2/2:0,0,34:39:255,255,255,114,102,0	1/1:2,35,0:39:255,78,0,255,111,255
-chr21	23560837	chr21:23560837:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	1/1:0,3:5:130,15,0	1/1:0,0:1:12,3,0
-chr21	23561169	chr21:23561169:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28,0:29:255,67,0,255,84,255	1/1:0,26,0:26:255,76,0,255,78,255	1/2:2,14,15:31:255,238,255,221,0,255
-chr21	23565159	chr21:23565159:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:147,0,166	1/1:0,34:39:255,113,0	0/0:32,6:38:0,4,255
-chr21	23565494	chr21:23565494:M	TGTGTGTGTGTGTGTATGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,10:20:187,0,105	0/0:6,0:6:0,18,128	0/1:9,2:11:10,0,160
-chr21	23565524	chr21:23565524:M	TATATATATATATATATATATATATATATATATATATAT	<13.5>,<17.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,5,3:11:255,86,114,190,0,169	0/0:0,0,0:2:0,3,12,3,12,12	0/1:2,1,0:5:32,0,85,21,22,48
-chr21	23574675	chr21:23574675:M	TATCTATCTATCTATATCTATCTATCTATCTATCTATCTATCTATC	<12.5>,<16.5>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,8:20:255,214,178,228,0,255	0/1:10,7,0:17:77,0,132,126,180,255	0/2:9,0,8:17:188,215,255,0,167,218
-chr21	23580505	chr21:23580505:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:19:191,0,17	0/0:18,2:21:0,28,255	1/1:3,18:22:255,12,0
-chr21	23584980	chr21:23584980:M	AAAAAAAAAAAAAAGAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,5:21:29,0,222	0/1:3,9:12:120,0,16	0/1:8,8:16:95,0,95
-chr21	23595926	chr21:23595926:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,19:36:244,0,197	0/0:32,3:37:0,55,255	0/1:16,16:35:204,0,195
-chr21	23601984	chr21:23601984:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:1:17,3,0	0/0:8,0:9:0,26,148	0/1:2,5:7:64,0,13
-chr21	23603142	chr21:23603142:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,6:21:41,0,199	0/0:39,0:39:0,114,255	0/1:20,10:30:80,0,253
-chr21	23605499	chr21:23605499:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,23:49:255,0,255	0/0:44,0:45:0,135,255	0/1:18,16:37:255,0,255
-chr21	23610549	chr21:23610549:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<31>,<32>	.	.	Motif=T	GT:AD:DP:PL	0/2:2,3,5:13:140,28,32,0,4,20	1/2:0,5,4:13:188,48,30,34,0,17	0/2:1,0,0:8:18,14,26,0,17,17
-chr21	23611502	chr21:23611502:M	AATAATAATAATAATAATAA	<10.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:15,9:24:169,0,255	0/0:30,0:30:0,90,255	0/1:18,12:32:229,0,255
-chr21	23611935	chr21:23611935:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:50,9,0	0/1:1,1:2:10,0,10	0/0:0,0:1:0,0,0
-chr21	23619726	chr21:23619726:M	TTTATTTTATTTTATTTTATTTTATTTTTTTTTTTT	<6>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,15:18:255,53,0	0/1:4,6:11:136,0,84	0/1:5,8:16:195,0,99
-chr21	23624737	chr21:23624737:M	ATATATATATATATACACATATATATGGAGTATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,2:27:2,0,255	0/1:7,4:12:99,0,154	0/1:19,6:29:128,0,255
-chr21	23627991	chr21:23627991:M	TATATATATATATA	<9>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,27:30:255,81,0	0/1:26,21:50:255,0,255	0/1:28,14:45:193,0,255
-chr21	23630930	chr21:23630930:M	TTGTTGTTGTTTTGTT	<4.7>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,23:28:255,66,0	0/1:21,18:39:106,0,140	0/1:16,11:30:70,0,108
-chr21	23634472	chr21:23634472:M	TTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,56,0	0/1:8,10:20:232,0,158	0/1:5,16:23:255,0,87
-chr21	23643392	chr21:23643392:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,42:45:255,95,0	0/1:23,23:48:255,0,255	0/1:16,23:40:255,0,186
-chr21	23651450	chr21:23651450:M	AAAAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,5:11:232,85,103,159,0,145	0/2:5,0,4:9:40,66,233,0,83,57	0/1:5,10,0:17:255,0,99,255,76,255
-chr21	23653615	chr21:23653615:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,8:17:219,135,192,109,0,151	0/1:7,8,0:18:116,0,70,159,102,255	0/2:14,1,6:21:46,87,255,0,192,199
-chr21	23653646	chr21:23653646:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<9>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,16,8:26:255,199,164,255,0,255	0/2:12,0,9:26:212,255,255,0,255,255	0/1:9,11,0:24:255,0,186,255,230,255
-chr21	23653673	chr21:23653673:M	TATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:16,13:32:230,0,255	1/1:1,22:28:255,50,0	0/1:16,9:29:144,0,255
-chr21	23655832	chr21:23655832:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,5:6:154,18,0	1/1:0,3:4:86,10,0
-chr21	23662030	chr21:23662030:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,29:46:255,0,164	0/0:43,2:47:0,102,255	0/1:21,22:44:255,0,253
-chr21	23671631	chr21:23671631:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:6:109,12,0	1/1:0,0:1:3,1,0	1/1:0,1:3:60,9,0
-chr21	23673860	chr21:23673860:M	TTTGTTTGTTTG	<3.2>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:13,13:29:49,0,63	0/1:20,19:44:68,0,102	0/0:23,0:25:0,61,222
-chr21	23675047	chr21:23675047:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:101,12,0	0/0:1,0:1:0,3,29	1/1:0,3:4:88,10,0
-chr21	23675412	chr21:23675412:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,26:54:255,0,255	0/0:50,0:51:0,150,255	0/1:23,22:45:255,0,255
-chr21	23676233	chr21:23676233:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,11:34:106,0,255	0/0:37,1:38:0,94,255	0/1:22,21:43:255,0,255
-chr21	23676759	chr21:23676759:M	AAACAAAAACAAAA	<2.5>	.	.	Motif=AAACAA	GT:AD:DP:PL	1/1:0,41:41:255,113,0	1/1:0,45:45:255,124,0	1/1:0,43:43:255,119,0
-chr21	23685841	chr21:23685841:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,18,16:34:255,255,255,255,255,204,255,255,0,243	1/2:0,31,14,0:45:255,250,118,255,0,255,255,212,255,255	3/3:0,0,0,35:35:255,255,255,255,255,255,103,105,103,0
-chr21	23689272	chr21:23689272:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:20,19:39:218,0,235	1/1:0,20:20:255,59,0
-chr21	23692049	chr21:23692049:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAA	<58>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0:11:0,32,194	0/1:3,1:4:5,0,39	0/1:1,3:4:40,0,6
-chr21	23693801	chr21:23693801:M	TTTTTTTCTTTTTTTCTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:39:0,117,255	0/1:17,16:33:255,0,255	0/0:38,0:38:0,114,255
-chr21	23697927	chr21:23697927:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:23:6,0,247	0/1:6,5:12:51,0,76	0/0:30,0:31:0,91,255
-chr21	23706889	chr21:23706889:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,27:30:255,33,0	1/1:1,32:33:255,79,0	1/1:0,38:39:255,114,0
-chr21	23722243	chr21:23722243:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:167,18,0	0/0:0,0:1:0,3,10	1/1:0,6:7:174,21,0
-chr21	23723516	chr21:23723516:M	TTTCTTTATTTCTTTTCTTTTCCTTTTTTTTTTTTCTTTCT	<10>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,21:22:255,64,0	1/1:0,24:26:255,73,0	1/1:0,22:24:255,69,0
-chr21	23729960	chr21:23729960:M	TTTTATTTTTTTATTTTTTATTTTTTATTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:14:111,0,73	0/0:16,2:18:0,17,250	1/1:0,24:25:255,64,0
-chr21	23730910	chr21:23730910:M	TTTATTTATTTATTTATTTATT	<6.5>,<7.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:9,21,0:30:255,0,87,255,173,255	0/0:33,0,0:33:0,97,255,99,255,255	1/2:0,18,25:43:255,255,255,255,0,215
-chr21	23741349	chr21:23741349:M	TTTTGTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,66,0	1/1:0,15:15:255,45,0	1/1:0,28:29:255,87,0
-chr21	23748118	chr21:23748118:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:18:255,50,0	1/1:0,17:21:255,54,0	1/1:0,23:25:255,69,0
-chr21	23754218	chr21:23754218:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,54:54:255,160,0	1/1:1,52:53:255,138,0	1/1:0,51:51:255,150,0
-chr21	23756750	chr21:23756750:M	CCCTCCCCCTCCCCC	<2.7>	.	.	Motif=CCCTCC	GT:AD:DP:PL	0/1:1,3:4:42,0,6	0/0:2,0:2:0,6,36	1/1:0,1:1:18,3,0
-chr21	23758057	chr21:23758057:M	AAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:112,12,0	1/1:0,7:8:200,23,0	.
-chr21	23758226	chr21:23758226:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:211,24,0	1/1:0,8:10:251,29,0	1/1:0,10:14:255,40,0
-chr21	23767163	chr21:23767163:M	ACACACACACACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,28:29:255,84,0	1/1:0,26:28:255,83,0
-chr21	23767798	chr21:23767798:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:8:171,23,0	1/1:0,12:15:255,44,0	1/1:0,13:16:255,45,0
-chr21	23769267	chr21:23769267:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:19:255,55,0	1/1:2,14:17:214,15,0	1/1:1,7:9:114,8,0
-chr21	23772296	chr21:23772296:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,34:36:255,69,0	1/1:0,26:27:255,70,0	1/1:0,28:29:255,85,0
-chr21	23776244	chr21:23776244:M	TTTTTTTTGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>,<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15,0:17:255,50,0,255,48,255	1/2:0,10,15:27:255,255,255,255,0,229	1/1:0,11,0:15:255,44,0,255,36,255
-chr21	23777141	chr21:23777141:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,45:49:255,106,0	0/1:21,23:46:255,0,244	1/1:1,34:36:255,87,0
-chr21	23779387	chr21:23779387:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26,1:28:255,64,0,255,64,255	1/1:0,23,0:23:255,67,0,255,67,255	1/2:0,13,8:22:255,134,82,188,0,173
-chr21	23782961	chr21:23782961:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:155,18,0	0/1:5,1:12:16,0,161	0/1:1,1:3:21,0,32
-chr21	23783661	chr21:23783661:M	ATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:3,42:45:255,76,0	0/1:23,11:34:98,0,255	1/1:1,39:40:255,99,0
-chr21	23796742	chr21:23796742:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>,<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:1,9,5:15:255,64,63,153,0,131	2/2:0,0,12:12:219,219,219,35,35,0	1/2:0,9,6:15:255,96,69,168,0,126
-chr21	23797911	chr21:23797911:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,32,0:32:255,96,0,255,96,255	1/2:0,10,5:15:255,90,105,255,0,251	1/1:0,18,0:18:255,54,0,255,54,255
-chr21	23797971	chr21:23797971:M	TTTTCTTTTTTTTCCTTTTTTCCTTTTTTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:87,15,0	0/1:4,3:7:30,0,46	1/1:1,8:9:120,9,0
-chr21	23798157	chr21:23798157:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:12:37,0,110	0/1:5,5:10:57,0,57	0/1:7,5:13:59,0,86
-chr21	23803677	chr21:23803677:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:92,17,0	1/1:0,3:4:39,2,0	0/1:2,3:5:35,0,18
-chr21	23803686	chr21:23803686:M	AAAGAAAGAAAGAAAGAAAAGAAA	<6.2>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,17:21:53,18,0	1/1:0,16:17:58,23,0	1/1:0,10:15:30,10,0
-chr21	23803777	chr21:23803777:M	TATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:3,25:30:255,40,0	0/1:4,8:12:83,0,24	1/1:0,15:16:224,43,0
-chr21	23805623	chr21:23805623:M	TGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:2,36:38:255,75,0	0/1:18,10:29:92,0,241	1/1:2,29:32:255,55,0
-chr21	23806439	chr21:23806439:M	GAGAGAAAGAAAGAGAGAGAGGGAGAGAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,33:33:255,99,0	0/1:13,11:24:255,0,255	1/1:0,17:17:255,51,0
-chr21	23806476	chr21:23806476:M	GAAAGAAAGAAAGAAAAAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<15>	.	.	Motif=GAAA	GT:AD:DP:PL	1/1:0,6:8:228,24,0	.	1/1:0,0:2:26,6,0
-chr21	23806571	chr21:23806571:M	AAGGAAGGAAGGAAGGAAGGAAGAAAACGAAGGAAGGAGGGAGGGAGAGAGGGAGGAAAAAAGAAAAAAGGAAGGAAGGAAGGAAAAGAAAGAAGGAAGG	<9>	.	.	Motif=AAGG	GT:AD:DP:PL	1/1:0,3:6:137,18,0	1/1:0,3:4:90,11,0	1/1:0,2:4:91,12,0
-chr21	23810815	chr21:23810815:M	AAAAAAAAAAAGAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:28:255,83,0	0/1:30,16:46:152,0,255	1/1:1,35:37:255,90,0
-chr21	23811329	chr21:23811329:M	GTGTTTGTGTGTGTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,20:25:255,74,0	0/1:30,16:55:255,0,255	1/1:0,34:40:255,117,0
-chr21	23814189	chr21:23814189:M	AAAAAACAAAAACAAAAACAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:37:255,88,0	0/1:24,7:33:6,0,228	1/1:0,32:36:255,90,0
-chr21	23814756	chr21:23814756:M	TATATATATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7,0:7:113,20,0,113,20,113	0/1:6,3,0:10:18,0,77,39,103,196	1/2:0,4,8:12:255,128,93,53,0,29
-chr21	23818534	chr21:23818534:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,1:17:0,32,255	0/0:18,0:18:0,53,255	0/1:12,5:17:38,0,161
-chr21	23818713	chr21:23818713:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:5:47,0,3	0/0:4,0:4:0,12,65	0/0:4,0:6:0,14,77
-chr21	23822338	chr21:23822338:M	AAAAAAAAACAAAAAACAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:32,0:32:0,94,255	0/1:13,12:25:150,0,168
-chr21	23823025	chr21:23823025:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:14,17:31:232,0,175	0/0:37,0:38:0,111,255	1/1:0,31:32:255,94,0
-chr21	23824022	chr21:23824022:M	TTTTATTTTCTTTTTCTTTTTTCTTTTTTCTTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:18:255,54,0	0/1:16,6:27:124,0,255	1/1:0,23:25:255,74,0
-chr21	23827547	chr21:23827547:M	TATGTGTGTATGTTTGTGTGTCTGTGTGTGTGTATGTAT	<10.2>	.	.	Motif=TATG	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:3,8:11:124,0,26	1/1:0,18:18:255,53,0
-chr21	23827583	chr21:23827583:M	TATATATATATATATATATAATATTTATAT	<18>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,20:23:255,47,0	0/1:5,3:9:50,0,112	1/1:0,14:15:255,34,0
-chr21	23830140	chr21:23830140:M	TTATTTATTTATTTATTTATTTA	<7.5>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,33:34:255,101,0	0/1:14,4:19:49,0,255	1/1:0,25:27:255,78,0
-chr21	23832333	chr21:23832333:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,36:42:255,83,0	0/1:17,20:39:255,0,183	1/1:0,28:30:255,85,0
-chr21	23836148	chr21:23836148:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,57,0	0/1:8,11:22:243,0,163	1/1:0,21:26:255,71,0
-chr21	23837002	chr21:23837002:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:49,0,48	0/0:14,1:18:0,31,236	0/0:11,0:11:0,32,192
-chr21	23837167	chr21:23837167:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:144,11,0	0/1:10,9:20:106,0,114	1/1:2,12:15:186,8,0
-chr21	23839400	chr21:23839400:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:17:198,4,0	0/1:15,7:23:63,0,192	1/1:1,22:23:255,50,0
-chr21	23846125	chr21:23846125:M	TGTTTTGTTTTTTTTGTTTT	<4.2>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:15,11:26:180,0,255	0/1:18,13:31:211,0,255	0/1:13,14:28:245,0,226
-chr21	23853857	chr21:23853857:M	AGAGAGAGAGAAAATGAGAGAGGGAGAGAGAGAGAGAGAGAGGAGAGAAGAGA	<25.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,20:22:255,64,0	0/1:13,15:28:187,0,151	1/1:0,14:14:255,41,0
-chr21	23858405	chr21:23858405:M	AAAAGAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:16:255,47,0	0/1:1,4:6:54,0,11	1/1:0,10:10:184,29,0
-chr21	23858427	chr21:23858427:M	ACACACACACACACACACACACACACACACA	<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6:6:176,18,0	0/0:0,0:2:0,5,27	1/1:0,3:4:108,12,0
-chr21	23858457	chr21:23858457:M	ATATATATATATATATATATATATATATATATATATATATATATATATA	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,12:14:255,42,0	1/1:0,2:4:54,6,0	1/1:0,4:5:120,14,0
-chr21	23859435	chr21:23859435:M	ATTATAATTATATAAAATTATATATTTATAATTATA	<2>	.	.	Motif=ATTATA	GT:AD:DP:PL	0/1:4,3:7:83,0,85	0/0:0,0:1:0,0,0	.
-chr21	23860662	chr21:23860662:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,28,0:29:255,84,0,255,86,255	1/2:0,17,12:29:255,207,255,255,0,255	1/1:0,21,0:22:255,65,0,255,66,255
-chr21	23864699	chr21:23864699:M	ACACACACACACACACACACACACACACACACACACACACACAC	<20>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,14:24:151,181,255,0,156,88	0/1:10,11,2:25:231,0,214,139,133,235	0/2:5,1,10:17:119,112,241,0,71,41
-chr21	23865257	chr21:23865257:M	TATATATATATATATATA	<6>,<8>	.	.	Motif=TA	GT:AD:DP:PL	0/1:19,13,3:35:255,0,255,255,216,255	1/2:4,13,18:37:255,186,255,255,0,236	0/0:30,0,3:33:0,98,255,53,255,255
-chr21	23874464	chr21:23874464:M	AAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:10:66,0,114	1/1:0,4:6:128,15,0	0/0:11,0:11:0,33,255
-chr21	23891093	chr21:23891093:M	ATATATAAATATATATATATATATATATATATATATATATATATATATATATATATATAT	<16>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,18:22:255,57,0	1/1:0,7:8:209,24,0	.
-chr21	23892751	chr21:23892751:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>,<17>,<18>	.	.	Motif=ATT	GT:AD:DP:PL	1/2:0,6,9,0:15:255,169,233,165,0,140,255,169,167,255	1/1:0,7,0,0:7:210,21,0,213,21,218,213,21,218,218	2/3:0,0,7,3:10:191,212,255,55,56,26,109,129,0,100
-chr21	23896888	chr21:23896888:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGTCTATCTATTTAACTATCTATCTA	<17.5>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:2,5:7:75,0,18	1/1:0,10:10:180,29,0	0/0:14,0:14:0,41,255
-chr21	23903804	chr21:23903804:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2,0:5:18,0,35,33,49,125	0/1:4,3,0:7:27,0,43,47,63,171	0/2:8,0,3:12:50,68,174,0,119,185
-chr21	23904757	chr21:23904757:M	TTTTTATTTTTATTTTTATTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:17:83,0,128	1/1:0,18:19:255,55,0	0/0:23,0:23:0,68,255
-chr21	23906360	chr21:23906360:M	TTATTTTATTTTATTTTATTTTATT	<6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:23,8:31:63,0,255	1/1:0,24:24:255,71,0	0/0:27,0:27:0,80,255
-chr21	23914137	chr21:23914137:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:3:8,0,25	.	1/1:0,4:4:67,12,0
-chr21	23919663	chr21:23919663:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:2,33:36:255,71,0	1/1:1,42:43:255,109,0
-chr21	23922844	chr21:23922844:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:27:255,58,0	1/1:2,27:31:255,53,0	1/1:0,32:34:255,99,0
-chr21	23924291	chr21:23924291:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:17,15:32:195,0,235	1/1:0,32:32:255,94,0	0/0:37,0:37:0,109,255
-chr21	23927858	chr21:23927858:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,93	1/1:0,6:6:106,18,0	0/1:9,2:11:4,0,130
-chr21	23948909	chr21:23948909:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:70,12,0	0/1:1,4:5:52,0,2	1/1:0,3:4:40,0,0
-chr21	23966637	chr21:23966637:M	CCCCCCCCCCCC	<13>	.	.	Motif=C	GT:AD:DP:PL	0/1:6,5:12:54,0,81	0/0:7,0:7:0,20,118	0/1:5,5:10:58,0,58
-chr21	23985888	chr21:23985888:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/0:27,2:30:0,51,255	0/1:14,13:32:150,0,186
-chr21	24006315	chr21:24006315:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,16,1,5:22:255,98,100,255,71,255,255,0,255,255	1/3:0,12,0,5:17:255,84,102,255,84,255,255,0,255,255	2/3:0,0,11,6:19:255,255,255,89,105,50,210,211,0,161
-chr21	24014707	chr21:24014707:M	TTGTTGTTGGGTTGTTGTTGTTGTTGTTTTGT	<9.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:12,20:32:255,0,123	0/1:20,23:43:255,0,249
-chr21	24018554	chr21:24018554:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:18,13:34:131,0,244	0/1:23,14:38:144,0,255
-chr21	24018856	chr21:24018856:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:26:0,77,255	0/1:16,8:26:153,0,255	0/1:15,10:28:199,0,255
-chr21	24034195	chr21:24034195:M	AACAACAACAA	<2.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:52,0:55:0,107,255	0/1:28,17:46:195,0,255	0/1:22,20:43:255,0,255
-chr21	24034667	chr21:24034667:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,81,255	0/1:28,26:54:255,0,255	0/1:13,30:43:255,0,116
-chr21	24034856	chr21:24034856:M	AATAAATAAATAAATAAATAA	<4.2>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/1:18,20:38:252,0,215	0/1:20,23:43:255,0,250
-chr21	24036151	chr21:24036151:M	AGACAAAGACAAAGA	<1.5>	.	.	Motif=AGACAA	GT:AD:DP:PL	0/0:32,0:35:0,81,255	0/1:19,17:38:205,0,242	0/1:17,18:37:248,0,206
-chr21	24042337	chr21:24042337:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,10:14:249,151,139,71,0,31	0/2:2,1,6:10:86,69,124,0,24,15	0/2:10,3,5:18:68,22,255,0,123,126
-chr21	24043471	chr21:24043471:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:14,14:31:172,0,162	0/1:14,19:35:255,0,149
-chr21	24045498	chr21:24045498:M	AAAAAAAAAAAAAAAAAA	<15>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19,0:21:255,62,0,255,62,255	0/1:5,10,0:19:251,0,123,255,109,255	1/2:0,11,6:19:255,103,122,255,0,255
-chr21	24047697	chr21:24047697:M	AAGAAAAAAAAAAAAAAGAAAAAGAAAAGAAA	<6.6>	.	.	Motif=AAGAA	GT:AD:DP:PL	0/1:6,10:17:161,0,82	0/0:8,1:10:0,8,153	0/1:11,6:18:73,0,184
-chr21	24049400	chr21:24049400:M	TATTTATTTATTTATTTATTTATTTA	<7.5>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:25,9:34:73,0,255	0/0:38,0:38:0,112,255	0/1:11,12:23:157,0,139
-chr21	24051269	chr21:24051269:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,13:25:164,0,146	1/1:2,18:23:255,29,0	0/1:15,10:26:103,0,201
-chr21	24051901	chr21:24051901:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,15:21:209,0,11	1/1:0,23:24:255,70,0	0/1:2,12:17:160,0,19
-chr21	24055340	chr21:24055340:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:25:111,0,194	1/1:2,27:31:255,53,0	0/0:24,0:27:0,78,255
-chr21	24055350	chr21:24055350:M	AACAACAACAAAAACAAACAAC	<5.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:4,1:5:8,0,88	0/1:28,2:37:27,0,255	1/1:1,12:14:255,16,0
-chr21	24061789	chr21:24061789:M	TTTTTCTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,20:38:255,0,225	1/1:2,28:34:255,63,0	0/1:19,17:36:203,0,241
-chr21	24076811	chr21:24076811:M	AGAGAGAGAGAGAGAGGAAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:11,16:29:255,0,211	0/0:22,0:23:0,69,255	0/1:18,11:31:217,0,255
-chr21	24081073	chr21:24081073:M	ATAACATAACA	<1.2>	.	.	Motif=ATAAC	GT:AD:DP:PL	0/1:17,24:41:255,0,211	0/0:22,0:22:0,65,255	0/1:24,29:53:255,0,255
-chr21	24093400	chr21:24093400:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21,1:41:255,0,240,255,255,255	0/0:38,0,0:40:0,117,255,120,255,255	0/2:19,6,11:38:224,105,255,0,255,255
-chr21	24096907	chr21:24096907:M	TCTCTCTCTCTCTCTCTCTCTCTCTC	<18>,<20>,<21>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,0,6,0:10:211,204,198,21,21,0,141,139,21,122	1/2:0,11,12,2:27:255,255,255,255,0,250,255,172,255,255	3/3:0,0,1,8:11:255,255,255,147,147,121,27,27,9,0
-chr21	24109572	chr21:24109572:M	TTTTTTTTTTTTTTTTT	<14>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,12,2,13:28:255,240,255,255,203,255,255,0,195,255	3/3:1,0,1,20:22:255,255,255,255,255,255,47,63,47,0	1/2:0,16,19,0:36:255,255,234,255,0,192,255,255,255,255
-chr21	24113576	chr21:24113576:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGA	<23>	.	.	Motif=AG	GT:AD:DP:PL	0/0:8,0:11:0,24,143	0/1:9,3:12:16,0,118	0/1:8,2:14:14,0,108
-chr21	24119044	chr21:24119044:M	TGTGTGTGTGTCTGTGTGTGTGTGTGTCTGTGTGTGCGTGCCTCTGTGTGTGTGTGTGTGTGTGT	<31.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:9,1:10:0,11,150	0/0:9,0:9:0,26,159	0/1:6,6:13:81,0,71
-chr21	24122103	chr21:24122103:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,11:31:121,0,242	0/0:34,4:41:0,49,255	0/1:18,18:41:232,0,224
-chr21	24126833	chr21:24126833:M	AAAAAAAAAAAAAAAGAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:23:255,0,178	0/0:26,1:30:0,56,255	0/1:10,10:20:205,0,210
-chr21	24129417	chr21:24129417:M	ACACACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,9:20:187,0,230	0/0:17,0:20:0,59,255	0/1:10,14:26:255,0,201
-chr21	24142240	chr21:24142240:M	AAAAAAAAAAAAACAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,26:30:255,37,0	1/1:1,27:29:255,68,0	1/1:0,33:36:255,101,0
-chr21	24157799	chr21:24157799:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:31,1:32:0,76,255	0/1:17,17:35:191,0,180	0/0:40,0:41:0,120,255
-chr21	24173632	chr21:24173632:M	AGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGACAGATAGATAGATAGGTATAGATAGAT	<11.2>,<18.5>,<19.5>,<20.5>	.	.	Motif=AGAT	GT:AD:DP:PL	1/2:0,5,5,0,4:14:204,93,126,83,0,103,140,28,82,126,149,26,30,96,130	1/4:0,1,0,0,5:6:79,66,130,92,119,137,79,66,92,79,26,0,27,26,12	1/3:0,2,2,4,0:10:187,120,119,100,27,83,74,0,46,56,147,74,89,73,133
-chr21	24175695	chr21:24175695:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,18:49:203,0,255	0/0:43,2:47:0,102,255	0/1:15,16:32:209,0,179
-chr21	24186995	chr21:24186995:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:14:0,23,212	0/1:8,9:19:105,0,89	0/0:18,2:22:0,9,255
-chr21	24203912	chr21:24203912:M	ACACACACACACACACACACACACACACA	<15.5>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:2,16,17:35:255,248,183,190,0,189	1/2:1,11,8:20:255,111,70,130,0,130	1/1:2,27,0:29:255,52,0,255,84,255
-chr21	24206789	chr21:24206789:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,0,3:8:207,78,61,136,50,114,128,0,84,119	1/2:0,5,6,1:13:255,105,72,83,0,56,213,66,74,202	3/3:0,0,0,4:5:135,132,129,92,92,80,15,15,14,0
-chr21	24210498	chr21:24210498:M	AAAACAAAACAAAACA	<4.4>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:22,18:40:255,0,255	0/1:22,22:44:255,0,255	0/0:53,0:53:0,159,255
-chr21	24214629	chr21:24214629:M	GAAAGAGATAAAGAGAAAGAAAGAGAAGGAGGGAGAGAGAAAGAGAAAG	<7.7>	.	.	Motif=GAAAGA	GT:AD:DP:PL	0/0:10,0:15:0,25,95	0/1:6,9:17:49,0,19	0/0:15,0:21:0,37,142
-chr21	24218390	chr21:24218390:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:7:32,0,50	1/1:0,3:3:50,9,0	0/1:2,2:5:29,0,20
-chr21	24222719	chr21:24222719:M	ACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,31:31:255,91,0	1/1:0,30:30:255,89,0
-chr21	24226730	chr21:24226730:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,0:52:0,152,255	0/1:28,23:53:255,0,255	0/1:21,19:40:232,0,255
-chr21	24229201	chr21:24229201:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:251,0,196	0/1:24,11:37:105,0,255	0/0:43,1:44:0,112,255
-chr21	24230523	chr21:24230523:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,14:22:199,0,63	0/1:13,14:27:162,0,145	1/1:0,18:19:255,55,0
-chr21	24235523	chr21:24235523:M	TATATATATATATATACTATATATGTATATATATATAT	<21>,<24>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,17,11:30:255,255,255,255,0,255	0/1:5,5,0:11:109,0,125,131,144,255	0/2:12,0,2:17:55,87,255,0,255,255
-chr21	24237613	chr21:24237613:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9,2:17:209,0,126,130,77,194	0/2:8,1,6:15:70,71,255,0,121,96	0/1:4,5,0:10:126,0,84,96,70,142
-chr21	24246457	chr21:24246457:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,18:21:255,25,0	0/1:11,4:15:25,0,146	1/1:2,17:19:255,20,0
-chr21	24250212	chr21:24250212:M	TGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:4,0,6:10:141,102,190,0,102,82	0/1:2,9,0:11:230,0,25,146,50,170	0/2:7,1,9:20:213,138,255,0,174,152
-chr21	24253627	chr21:24253627:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,1:48:0,123,255	0/1:20,17:37:195,0,248	0/0:59,0:59:0,174,255
-chr21	24257979	chr21:24257979:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/2:2,11,11:24:255,167,255,167,0,253	1/2:1,15,23:41:255,255,255,249,0,255	1/2:0,19,17:37:255,255,255,255,0,255
-chr21	24267083	chr21:24267083:M	AAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,26:26:255,78,0	.
-chr21	24271463	chr21:24271463:M	AGATAAATAGGTAGATAGATGATTGATTGATTGATAGATGGATAGATAGATAGATGATAGACAGATGATAGA	<20>	.	.	Motif=AGAT	GT:AD:DP:PL	0/1:4,2:6:33,0,84	0/0:13,0:13:0,39,255	0/1:8,5:14:85,0,166
-chr21	24273612	chr21:24273612:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:14:233,41,0	0/1:7,3:11:28,0,84	1/1:0,15:17:255,49,0
-chr21	24274643	chr21:24274643:M	TTTTTTTTTTTCTCTTTTTTGTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,0:17:0,41,255	0/1:11,6:19:114,0,243	0/0:11,0:13:0,29,255
-chr21	24277609	chr21:24277609:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,11:35:100,0,255	0/1:15,19:36:242,0,152	0/1:13,14:29:172,0,154
-chr21	24280683	chr21:24280683:M	TATATATATATATATATATATATAT	<13.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,15,12:29:255,193,131,206,0,197	0/2:1,1,2:4:50,19,25,0,3,20	1/1:1,6,0:9:89,4,0,72,2,93
-chr21	24287743	chr21:24287743:M	ATAATAATAATAATAATAATAATAAT	<6.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:12,4:18:38,0,211	1/1:0,8:10:170,24,0	0/0:18,1:19:0,35,255
-chr21	24287767	chr21:24287767:M	ATCATCATCATCATCATCAT	<9.7>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,29:33:255,98,0	1/1:0,27:28:255,83,0	1/1:0,32:37:255,108,0
-chr21	24292912	chr21:24292912:M	TGTTTTTGTTTTTTTTTT	<3.2>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/0:16,0:16:0,48,255	0/1:18,17:35:250,0,255	0/0:13,0:13:0,39,255
-chr21	24295450	chr21:24295450:M	AAAAAAACAAAAACAAAAACAAAACAAAACAAAAAAAA	<39>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:12:0,28,171	0/1:16,6:24:43,0,213	0/0:14,0:16:0,34,236
-chr21	24296135	chr21:24296135:M	TTTTTTCTTTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,15:19:227,9,0	1/1:0,13:16:182,12,0	1/1:0,9:13:154,15,0
-chr21	24302678	chr21:24302678:M	TGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,26,0:28:255,77,0,255,79,255	1/2:4,8,8:21:173,80,185,90,0,198	1/2:2,13,11:26:255,166,254,202,0,255
-chr21	24307116	chr21:24307116:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19:34:255,0,164	0/1:30,25:56:255,0,255	0/1:25,14:40:140,0,255
-chr21	24307538	chr21:24307538:M	TTTTTCTTTTTTTTTTTTTTTTTTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,0:3:16,20,36,0,14,9	1/1:0,3,0:4:49,9,0,56,8,82	2/2:0,0,4:6:90,102,141,17,18,0
-chr21	24310402	chr21:24310402:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,20,13:34:255,225,255,255,0,255	1/2:0,29,9:38:255,157,151,255,0,255	1/2:0,22,15:37:255,255,255,255,0,255
-chr21	24314168	chr21:24314168:M	AAATAAATAAATAAATAAATAAATAAATAAATAAAT	<8>,<10>	.	.	Motif=AAAT	GT:AD:DP:PL	0/2:7,0,9:16:132,178,255,0,117,89	1/2:0,7,7:14:217,127,186,129,0,208	0/2:9,0,10:20:134,191,255,0,148,118
-chr21	24315345	chr21:24315345:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:132,15,0	1/1:0,3:4:98,12,0	0/1:1,5:10:166,0,2
-chr21	24316096	chr21:24316096:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8,0:11:243,8,0,249,27,255	1/2:0,1,3:9:96,51,84,51,0,50	0/1:0,0,0:3:3,0,16,10,19,29
-chr21	24320424	chr21:24320424:M	AATAAATAAATAAATAAA	<3.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/1:0,37:37:255,110,0	0/1:22,20:42:244,0,255	1/1:0,41:41:255,121,0
-chr21	24322175	chr21:24322175:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:20,0,14:34:168,255,255,0,255,255	1/2:0,25,21:46:255,255,255,255,0,255	0/2:21,1,24:46:255,255,255,0,255,255
-chr21	24325234	chr21:24325234:M	ATATATATATATATATATATATATATATATATAT	<20.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,3:5:66,0,18	0/0:1,0:2:0,6,51	0/0:0,0:1:0,2,5
-chr21	24327928	chr21:24327928:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,25:29:255,46,0	1/1:1,38:41:255,102,0	1/1:0,23:25:255,73,0
-chr21	24341060	chr21:24341060:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:30:255,83,0	1/1:0,44:48:255,135,0	1/1:0,28:32:255,89,0
-chr21	24342272	chr21:24342272:M	ATCTATCTATCTATCTATGTATCTATCTATCAACTGTCTATCATCTGTCTATTTATCATCTATCTATCT	<18.2>	.	.	Motif=ATCT	GT:AD:DP:PL	1/1:0,9:10:141,26,0	1/1:0,8:9:121,23,0	1/1:0,19:21:255,55,0
-chr21	24349210	chr21:24349210:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:52,0,80	0/1:2,8:10:104,0,4	0/1:3,3:8:29,0,47
-chr21	24350862	chr21:24350862:M	AAAGAAAGAAA	<1.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,59:59:255,174,0	1/1:0,49:49:255,145,0
-chr21	24357842	chr21:24357842:M	TATATATATATATATGTATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:26,20:46:250,0,255	1/1:0,36:36:255,106,0	0/0:47,2:49:0,107,255
-chr21	24361597	chr21:24361597:M	TTTTTGTTTGTTTTTTTTTTGTTGTTTTTTGTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:30,1:31:0,73,255	0/1:17,12:29:132,0,223
-chr21	24367103	chr21:24367103:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:0,5:5:131,15,0
-chr21	24373121	chr21:24373121:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:29:89,0,248	1/1:4,28:35:255,35,0	0/1:17,16:36:178,0,201
-chr21	24374789	chr21:24374789:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,100,0	1/1:2,44:47:255,103,0	1/1:2,49:51:255,114,0
-chr21	24379399	chr21:24379399:M	AAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:7:83,0,43	0/1:1,6:8:140,0,4	0/1:5,6:12:120,0,101
-chr21	24379660	chr21:24379660:M	TTATTATTATTATTATTATTATT	<8.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:17,21:38:255,0,216	1/1:0,21:21:255,62,0	0/1:12,19:31:255,0,134
-chr21	24382599	chr21:24382599:M	AAAAATAAAAAAAAAAAAAAA	<18>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,11,4,8:25:255,141,168,245,75,201,255,0,135,255	1/2:0,19,11,0:32:255,175,88,255,0,215,255,145,255,255	2/3:1,0,19,13:36:255,255,255,160,218,127,255,254,0,214
-chr21	24383530	chr21:24383530:M	ATATATATATATATATATATATA	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:13,0:19:0,42,255	1/1:0,0:2:0,0,0	0/1:10,6:16:118,0,229
-chr21	24383556	chr21:24383556:M	AGAGAGAGAGAGA	<8.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:17,0:17:0,51,255	.	0/1:12,4:16:50,0,255
-chr21	24383571	chr21:24383571:M	ATATATATATACAGATATATATATATATATATACAGATATATATATACAGATATATATATATATATATA	<35.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:4:47,11,0	.	0/1:3,1:4:1,0,24
-chr21	24387454	chr21:24387454:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,12,0,5:18:255,157,123,255,142,255,208,0,255,255	2/3:1,0,10,4:17:255,255,255,99,114,74,154,255,0,255	1/1:0,30,0,0:31:255,91,0,255,93,255,255,93,255,255
-chr21	24391572	chr21:24391572:M	ATATATATAGTTATTTATAACATATAATATATATTTATAATATATATTATAT	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,3:13:43,0,222	0/1:2,3:5:67,0,37	0/1:5,5:10:107,0,100
-chr21	24402019	chr21:24402019:M	AAAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,7:23:58,0,211	1/1:1,11:15:179,16,0	0/0:21,1:22:0,47,255
-chr21	24412839	chr21:24412839:M	ATATGTATATATATGTATATATATATATATATACATATATATAT	<24>	.	.	Motif=AT	GT:AD:DP:PL	0/1:6,10:16:255,0,124	0/1:0,0:1:0,0,0	0/0:8,0:10:0,24,232
-chr21	24434397	chr21:24434397:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,2:13:19,0,255	0/0:19,0:25:0,74,255	0/1:10,5:19:92,0,246
-chr21	24480365	chr21:24480365:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:23:0,48,255	0/0:34,3:40:0,64,255	0/1:13,13:27:155,0,167
-chr21	24483526	chr21:24483526:M	AAAATAAAATAAAATAAAATAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATA	<13>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/1:8,10:18:142,0,103	0/1:1,1:2:12,0,12	1/1:0,5:7:115,20,0
-chr21	24492847	chr21:24492847:M	TCTCTCTCTCTCTCTCTCTCCCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:29,0:30:0,87,255	0/0:46,1:47:0,116,255	0/1:16,20:36:255,0,255
-chr21	24492880	chr21:24492880:M	TGTTTTTTTTGTTGTTTTGATTTGTTTTGTTTTGTTTT	<7.8>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:35,0:35:0,104,255	0/1:13,7:20:93,0,228
-chr21	24501023	chr21:24501023:M	ACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	<9.2>,<10.2>	.	.	Motif=ACAAA	GT:AD:DP:PL	0/2:8,0,11:19:255,211,255,0,153,179	0/1:10,12,0:23:152,0,127,185,189,255	2/2:0,0,20:20:255,255,255,60,59,0
-chr21	24505690	chr21:24505690:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:25:0,58,255	0/0:20,0:25:0,46,255	0/1:16,19:40:255,0,255
-chr21	24508486	chr21:24508486:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:25:0,70,255	0/0:32,0:36:0,101,255	0/1:16,7:27:54,0,227
-chr21	24518180	chr21:24518180:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:97,12,0	1/1:0,5:8:181,23,0	1/1:0,7:7:203,21,0
-chr21	24519399	chr21:24519399:M	TCTCTCTCTCCCTTTCTCTGTCTCTCTCTCTCTCTCTC	<18>,<20>	.	.	Motif=TC	GT:AD:DP:PL	0/2:17,0,12:30:70,141,255,0,161,138	0/2:16,1,8:25:30,86,255,0,144,140	1/2:0,8,21:29:255,255,255,93,0,100
-chr21	24519436	chr21:24519436:M	CACACACACACACACAAACACA	<14>	.	.	Motif=CA	GT:AD:DP:PL	0/1:22,24:47:255,0,255	0/1:18,14:33:255,0,255	1/1:0,31:34:255,101,0
-chr21	24521573	chr21:24521573:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAA	<33>,<35>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:12:88,100,201,0,120,165	0/2:12,1,7:23:144,159,255,0,197,255	1/2:1,11,2:15:198,41,22,171,0,255
-chr21	24526323	chr21:24526323:M	TTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,1,3:5:124,62,50,18,0,4	1/2:0,2,0:3:71,10,3,34,0,26	1/2:0,5,2:7:206,35,15,87,0,67
-chr21	24527024	chr21:24527024:M	TTTTCTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7,0:15:82,0,100,106,142,255	0/2:6,0,9:17:207,158,227,0,108,130	1/1:1,12,0:13:193,21,0,196,38,221
-chr21	24530150	chr21:24530150:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,14:23:186,0,96	0/1:16,8:28:68,0,225	0/0:34,0:38:0,110,255
-chr21	24533391	chr21:24533391:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,9:22:255,218,195,194,0,255	1/2:1,9,8:18:255,191,174,134,0,216	0/1:20,12,0:33:114,0,255,208,255,255
-chr21	24543216	chr21:24543216:M	TGTGTGTGTGTGTGTGTGTGTG	<12>,<16>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,15,17:34:255,255,255,255,0,255	1/2:0,14,10:26:255,255,239,245,0,255	0/1:24,12,0:37:112,0,255,219,255,255
-chr21	24545569	chr21:24545569:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,27,12:39:255,217,224,255,0,255	1/2:2,13,17:33:255,255,255,204,0,255	0/1:26,25,0:53:255,0,255,255,255,255
-chr21	24551703	chr21:24551703:M	TTTTCTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:13:0,30,171	1/1:0,6:11:127,24,0	0/1:9,3:13:14,0,130
-chr21	24563122	chr21:24563122:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,28:30:255,70,0	1/1:1,45:46:255,117,0	1/1:1,42:44:255,111,0
-chr21	24566744	chr21:24566744:M	TATATATATATATATATATATATATATA	<16>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:12:227,33,0	0/1:1,1:3:15,0,15	0/1:1,3:7:51,0,9
-chr21	24572962	chr21:24572962:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:40:218,0,255	0/1:24,16:42:159,0,255	0/0:41,0:44:0,128,255
-chr21	24580128	chr21:24580128:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:6:119,51,66,76,0,67	0/1:3,7,0:11:166,0,66,178,58,228	2/2:0,0,2:2:34,40,59,6,6,0
-chr21	24584325	chr21:24584325:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:17:7,0,179	0/1:4,7:13:91,0,40	0/0:22,0:24:0,69,255
-chr21	24586155	chr21:24586155:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTT	<29>,<30>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,7:15:255,134,94,106,0,83	2/2:0,0,6:8:199,143,125,24,23,0	1/2:1,4,4:9:145,53,45,42,0,55
-chr21	24586339	chr21:24586339:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,5:9:74,0,28	1/1:2,13:18:221,17,0	0/0:10,0:10:0,29,177
-chr21	24592409	chr21:24592409:M	TTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:5:72,9,0	1/1:0,3:4:104,12,0	.
-chr21	24593600	chr21:24593600:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,6:6:165,18,0	0/1:8,9:17:198,0,175
-chr21	24599889	chr21:24599889:M	TTTTATTTTTAT	<2.3>	.	.	Motif=TTTTAT	GT:AD:DP:PL	1/1:0,46:46:255,138,0	1/1:0,39:39:255,117,0	0/1:15,20:35:255,0,255
-chr21	24601238	chr21:24601238:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,1:16:0,29,249	0/0:19,1:23:0,49,255	0/1:14,9:25:97,0,174
-chr21	24616356	chr21:24616356:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0:30:255,90,0,255,90,255	1/1:0,47,0:49:255,147,0,255,147,255	1/2:0,26,13:39:255,255,255,255,0,255
-chr21	24617888	chr21:24617888:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,5:47:0,46,255	0/0:40,2:42:0,88,255	0/1:36,31:69:255,0,255
-chr21	24618983	chr21:24618983:M	TTTTTGTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:89,15,0	1/1:1,8:10:117,9,0	0/1:6,6:16:62,0,87
-chr21	24621663	chr21:24621663:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,22:27:255,24,0	1/1:2,21:23:255,33,0	0/1:17,8:28:61,0,250
-chr21	24622313	chr21:24622313:M	AAAAAAAAAAAGAAAAAAAGAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:0,29:30:255,88,0	0/1:13,11:24:130,0,167
-chr21	24624600	chr21:24624600:M	AACAAACAAACAAACAAACAAACAAACAAA	<8.5>	.	.	Motif=AACA	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,30:30:255,88,0	0/1:14,13:27:169,0,184
-chr21	24627642	chr21:24627642:M	ATAAATACATAAGTAAATAAATAA	<6.2>	.	.	Motif=ATAA	GT:AD:DP:PL	1/1:6,26:32:227,18,0	1/1:5,24:30:210,17,0	0/1:26,13:39:42,0,191
-chr21	24627670	chr21:24627670:M	GTGTGTGTGTGTGTGTGTGTGT	<9>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,34:34:255,102,0	0/1:21,23:45:255,0,255
-chr21	24630988	chr21:24630988:M	TGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGT	<16.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,38:39:255,114,0	0/1:11,21:32:255,0,110
-chr21	24633370	chr21:24633370:M	TGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,9:21:255,104,47,109,0,82	1/2:1,7,5:13:143,45,22,51,0,55	0/2:11,1,3:15:25,22,107,0,113,201
-chr21	24634911	chr21:24634911:M	TAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	<10.2>,<11.2>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/2:4,0,5:10:69,69,165,0,62,50	0/2:3,0,3:7:37,33,104,0,41,36	1/2:0,7,4:11:243,63,42,129,0,99
-chr21	24636570	chr21:24636570:M	TATATATATATATATATATATATATAT	<7.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,23:24:255,255,255,72,72,0	2/2:0,0,4:4:116,116,116,12,12,0	1/2:0,8,5:15:255,133,116,200,0,188
-chr21	24636638	chr21:24636638:M	TATATATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,34:35:255,98,0	1/1:0,12:13:169,36,0	0/1:17,8:28:67,0,146
-chr21	24636656	chr21:24636656:M	TTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,5,27:34:255,255,249,99,11,0	2/2:0,0,9:11:255,119,87,31,8,0	1/1:0,20,4:30:255,86,0,255,33,255
-chr21	24641986	chr21:24641986:M	TTTGTTTCTGTTTTTGTTTTTTTTTT	<4.5>	.	.	Motif=TTTGTT	GT:AD:DP:PL	0/0:35,2:38:0,76,255	0/1:7,13:21:171,0,60	0/0:22,0:22:0,64,255
-chr21	24644109	chr21:24644109:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,3:4:39,0,5	1/1:0,1:2:28,6,0
-chr21	24645907	chr21:24645907:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:17:255,51,0	1/1:0,11:15:255,36,0	1/1:1,15:17:255,21,0
-chr21	24656275	chr21:24656275:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:15:202,7,0	0/1:2,7:13:124,0,15	1/1:2,11:14:174,5,0
-chr21	24660566	chr21:24660566:M	TTAATTAAATTAATTGATTAATTA	<5>	.	.	Motif=TTAA	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,37:38:255,112,0	1/1:0,37:37:255,109,0
-chr21	24663567	chr21:24663567:M	TTTTCTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:12:255,35,0	1/1:0,9:12:255,31,0	1/1:0,3:3:89,9,0
-chr21	24667453	chr21:24667453:M	ATATATATATATATATAAAATATATATAT	<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,23:23:255,69,0	1/1:0,8:8:210,24,0	1/1:0,17:17:255,51,0
-chr21	24667499	chr21:24667499:M	ATATATATATATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,14:14:255,42,0	1/1:0,19:21:255,60,0
-chr21	24669541	chr21:24669541:M	CTCTCTCTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:1,40:41:255,103,0	1/1:0,34:36:255,105,0
-chr21	24680590	chr21:24680590:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:32:255,56,0	1/1:1,43:45:255,114,0	1/1:0,34:34:255,100,0
-chr21	24681669	chr21:24681669:M	CACACACACACAC	<7.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:1,41:42:255,105,0	1/1:1,29:30:255,70,0	1/1:0,29:29:255,86,0
-chr21	24682960	chr21:24682960:M	ACACACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39:41:255,122,0	1/1:0,36:36:255,108,0	1/1:0,48:48:255,144,0
-chr21	24686391	chr21:24686391:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:47:255,138,0	1/1:2,52:56:255,128,0	1/1:0,42:43:255,126,0
-chr21	24688236	chr21:24688236:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,44:47:255,101,0	0/1:20,21:42:255,0,231	0/1:15,28:44:255,0,145
-chr21	24690435	chr21:24690435:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAA	<39>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4,0:5:52,0,2,55,16,79	0/1:4,6,0:11:64,0,43,78,72,182	0/2:2,1,3:6:63,34,50,0,18,39
-chr21	24696204	chr21:24696204:M	TGTGTGTATGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,18:30:255,0,138	0/0:20,0:22:0,62,255	1/1:0,19:23:255,68,0
-chr21	24696241	chr21:24696241:M	ACACACACACACACACACATACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,10:24:175,0,250	0/0:22,0:22:0,66,255	1/1:0,17:17:255,51,0
-chr21	24698516	chr21:24698516:M	AAAAAAATAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,255	0/0:43,0:43:0,129,255	1/1:0,52:55:255,164,0
-chr21	24701845	chr21:24701845:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,1:36:0,88,255	0/1:14,21:36:255,0,143	0/0:46,1:47:0,120,255
-chr21	24715815	chr21:24715815:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:12:119,0,45	0/0:0,0:1:0,3,19	1/1:0,6:10:206,23,0
-chr21	24715854	chr21:24715854:M	AGAGAGAGAGAGAAAGAGAGAGAGAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,9:28:139,0,255	0/0:26,0:26:0,78,255	1/1:0,15:17:255,37,0
-chr21	24718412	chr21:24718412:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,11:27:180,0,255	0/1:16,16:36:255,0,255	1/1:2,26:34:255,37,0
-chr21	24727598	chr21:24727598:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,22:42:255,0,244	0/0:30,0:32:0,93,255	0/1:23,19:44:212,0,255
-chr21	24729171	chr21:24729171:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0,0:37:0,109,255,111,255,255	0/2:16,2,18:38:255,255,255,0,255,255	0/1:26,24,1:51:255,0,255,255,255,255
-chr21	24736981	chr21:24736981:M	GTGGGGTGGGG	<2.4>	.	.	Motif=GTGGG	GT:AD:DP:PL	0/1:3,14:17:255,0,18	0/0:16,0:16:0,48,255	0/1:11,15:26:255,0,174
-chr21	24738324	chr21:24738324:M	AAAAAAAAATAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,14:37:150,0,255	0/1:14,12:26:133,0,168	1/1:0,21:22:255,64,0
-chr21	24741148	chr21:24741148:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>,<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,10,5,0,0:28:255,0,255,63,237,255,255,162,221,255,255,255,255,255,255	0/4:11,0,0,1,5:18:83,130,255,130,255,255,57,195,192,143,0,253,229,120,208	2/3:4,9,12,20,1:46:255,241,255,207,255,255,255,37,0,255,255,255,255,255,255
-chr21	24741192	chr21:24741192:M	ATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:20,23:46:255,0,255	0/0:24,0:24:0,72,255	0/1:27,24:52:255,0,255
-chr21	24741202	chr21:24741202:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/1:10,12:22:249,0,177	0/1:31,21:52:255,0,255
-chr21	24748702	chr21:24748702:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,7:23:124,0,255	0/0:28,0:29:0,87,255	0/1:20,15:38:255,0,255
-chr21	24765824	chr21:24765824:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,13:28:255,243,168,219,0,178	0/1:14,12,0:28:129,0,185,177,255,255	0/2:13,0,8:21:165,141,255,0,230,255
-chr21	24767358	chr21:24767358:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:251,0,255	0/1:17,22:39:255,0,255	0/0:32,0:33:0,99,255
-chr21	24767403	chr21:24767403:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:197,15,0	0/1:0,1:2:39,0,7	1/1:0,1:1:32,3,0
-chr21	24774242	chr21:24774242:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,22:50:255,0,255	0/0:43,0:46:0,134,255	0/1:20,27:50:255,0,223
-chr21	24781970	chr21:24781970:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:31:96,0,180	0/1:15,14:31:135,0,128	0/0:30,1:32:0,75,255
-chr21	24784350	chr21:24784350:M	ATATATATATATATATATAT	<9>,<11>	.	.	Motif=AT	GT:AD:DP:PL	1/2:2,14,16:34:255,255,255,245,0,255	0/1:16,17,0:36:218,0,187,255,242,255	0/2:16,0,14:31:181,255,255,0,251,207
-chr21	24791984	chr21:24791984:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTG	<22.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,5,0:13:52,0,100,76,134,255	0/1:13,9,0:22:90,0,159,129,220,255	0/2:14,2,11:29:240,161,255,0,230,255
-chr21	24797961	chr21:24797961:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:14:73,0,162	0/1:11,8:24:161,0,255	0/0:24,0:24:0,72,255
-chr21	24799402	chr21:24799402:M	AAAAAAAAAAAAAAAAAAA	<17>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18,0:22:255,62,0,255,65,255	1/2:0,4,6:11:187,107,157,99,0,82	1/2:2,24,8:39:255,106,166,255,0,255
-chr21	24802225	chr21:24802225:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGT	<16>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,29:29:255,87,0	0/1:14,16:30:255,0,255	0/1:20,17:41:255,0,255
-chr21	24806111	chr21:24806111:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:0,33:33:255,97,0	0/0:19,0:20:0,59,255
-chr21	24807935	chr21:24807935:M	ATATTATATATATATATATGTAAATATATATATA	<18>,<19>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,12,18:31:255,255,253,175,0,147	0/2:6,1,7:14:159,108,177,0,90,132	0/1:10,13,0:23:174,0,118,204,183,255
-chr21	24811882	chr21:24811882:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:22:94,0,146	0/1:12,10:24:104,0,147	0/0:20,0:20:0,59,255
-chr21	24828390	chr21:24828390:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,8:20:168,0,224	0/1:7,6:15:136,0,153	1/1:1,15:22:255,21,0
-chr21	24832630	chr21:24832630:M	ACACACACACACACACAC	<10>	.	.	Motif=AC	GT:AD:DP:PL	0/1:27,18:46:202,0,255	0/0:42,0:44:0,129,255	0/1:29,22:52:255,0,255
-chr21	24835684	chr21:24835684:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,9:28:187,0,255	0/0:20,0:27:0,63,255	0/1:17,8:28:146,0,255
-chr21	24836423	chr21:24836423:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,29:47:255,0,202	0/1:14,14:29:165,0,174	0/1:13,24:37:255,0,131
-chr21	24838266	chr21:24838266:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,22:24:255,255,255,65,58,0	1/2:0,12,12:27:255,211,255,255,0,255	0/2:11,0,10:26:134,201,255,0,210,142
-chr21	24841845	chr21:24841845:M	TTTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:29:0,82,255	0/1:24,9:33:59,0,255	0/0:29,0:29:0,85,255
-chr21	24847015	chr21:24847015:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:30:211,0,155	0/1:24,17:43:186,0,255	1/1:0,27:29:255,85,0
-chr21	24855453	chr21:24855453:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2:39:0,78,255	0/1:20,14:36:145,0,255	0/1:11,21:32:255,0,106
-chr21	24859691	chr21:24859691:M	ATATATATATATATATATA	<7.5>,<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:19,17,1:37:255,0,255,255,255,255	0/2:9,0,19:28:255,255,255,0,159,79	1/2:0,18,19:37:255,255,247,255,0,228
-chr21	24870562	chr21:24870562:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,14:34:155,0,255	0/1:12,13:28:144,0,156	1/1:1,28:35:255,80,0
-chr21	24878687	chr21:24878687:M	TTTGTTTTGTTTGTGGTGTTTTTCTTTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	<10>	.	.	Motif=TTTGT	GT:AD:DP:PL	1/1:0,2:3:61,9,0	1/1:0,6:8:169,24,0	1/1:0,3:3:68,9,0
-chr21	24879776	chr21:24879776:M	TATTTTTTTATGTGTATTTATTTATATTTATTT	<7>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:18,8:26:125,0,255	0/0:8,0:8:0,24,214	0/1:10,9:19:173,0,210
-chr21	24879820	chr21:24879820:M	TATATATATTTTTATATATGTTTATATATATTTTATATATTTATATATACGTATATATATATACGTATATATATATATATATATATACACATATATATA	<27.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,1:1:23,3,0	.	1/1:0,3:3:69,9,0
-chr21	24889901	chr21:24889901:M	ATATATATATATATGTGTGTGTATATATATATATATATAT	<18>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,14:29:255,0,255	0/1:5,13:18:255,0,80	1/1:0,34:34:255,102,0
-chr21	24899193	chr21:24899193:M	GAGAGAGAGAGAGAGAGAGAGACGGAAAGAGAGAGAGAGAGACAGACAGAGAGACAGACAGACAGAGAGACAGACAGAGAGA	<5.5>	.	.	Motif=GAGA	GT:AD:DP:PL	0/1:2,4:10:92,0,38	0/1:3,1:9:15,0,71	0/0:4,0:11:0,15,122
-chr21	24905907	chr21:24905907:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3,2:12:20,0,114,18,71,144	0/2:6,1,2:11:17,19,116,0,62,85	2/2:1,0,6:7:89,108,173,3,18,0
-chr21	24917569	chr21:24917569:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:30:0,69,255	0/1:18,17:35:204,0,221	0/1:25,25:50:255,0,255
-chr21	24922191	chr21:24922191:M	ATATATATGGTATATATCATATATATAT	<15>	.	.	Motif=AT	GT:AD:DP:PL	0/1:14,3:17:8,0,220	0/0:15,0:15:0,44,255	0/1:17,6:23:45,0,251
-chr21	24922373	chr21:24922373:M	TTTTTTTTCTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,2,10:24:255,255,255,0,159,255	0/1:5,7,0:14:82,0,59,119,94,255	1/2:0,11,2:17:250,94,73,183,0,255
-chr21	24928678	chr21:24928678:M	TTTTTTTTATTTTTTTTATTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:38:255,93,0	1/1:0,28:28:255,82,0	1/1:1,33:34:255,82,0
-chr21	24934629	chr21:24934629:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:30:119,0,235	1/1:1,17:21:255,34,0	0/1:10,14:24:175,0,105
-chr21	24937333	chr21:24937333:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:36,0,19	1/1:1,7:8:97,7,0	1/1:0,5:5:83,15,0
-chr21	24940527	chr21:24940527:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:2:52,6,0	.	1/1:0,3:3:91,9,0
-chr21	24941147	chr21:24941147:M	TAAAAATAAAAA	<2.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/1:21,30:52:255,0,158	0/1:29,17:47:122,0,255	0/0:41,0:42:0,112,255
-chr21	24943428	chr21:24943428:M	TTTTTTTTTTTTCTTTTTTTTTTTTTTTT	<28>,<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3,0:6:47,0,18,61,30,114	0/2:2,0,3:5:36,50,106,0,28,19	1/2:0,6,3:10:139,61,68,103,0,144
-chr21	24946296	chr21:24946296:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:79,14,0	0/1:1,3:5:51,0,2	1/1:0,3:3:51,9,0
-chr21	24952227	chr21:24952227:M	TTCTTGTTCTTGTTTTGTT	<3.7>	.	.	Motif=TTCTTG	GT:AD:DP:PL	0/1:22,16:38:255,0,255	0/0:44,0:45:0,133,255	0/1:27,14:41:253,0,255
-chr21	24955214	chr21:24955214:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,10:18:132,0,61	0/1:10,4:16:23,0,134	0/1:6,12:19:154,0,50
-chr21	24957091	chr21:24957091:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,17:22:255,50,0	1/1:0,4:6:82,14,0	1/1:0,6:7:108,18,0
-chr21	24958748	chr21:24958748:M	AAAAAAGAAAAAAAAAAAAAAAAACAAAGAAAAGAAAA	<37>,<39>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,8:15:165,122,189,64,0,90	2/2:1,0,9:13:166,195,255,21,35,0	1/2:0,4,5:10:136,83,111,76,0,97
-chr21	24969519	chr21:24969519:M	ACACACACGCAGACACACACACACACATCTAAACACACACACACACACAC	<26>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,9:18:117,0,116	1/1:0,24:24:255,71,0	0/1:11,10:22:119,0,146
-chr21	24974689	chr21:24974689:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,5:28:9,0,255	1/1:0,16:17:255,49,0	0/1:11,6:19:68,0,135
-chr21	24981549	chr21:24981549:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,10:27:255,162,106,201,0,194	1/2:0,18,8:27:255,141,66,248,0,221	1/2:2,13,18:35:255,255,211,142,0,149
-chr21	24987372	chr21:24987372:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:27:238,0,255	0/0:19,0:23:0,62,255	0/1:11,5:19:87,0,251
-chr21	24990644	chr21:24990644:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:20:255,40,0	0/1:18,10:30:97,0,221	0/1:11,14:30:185,0,119
-chr21	24991240	chr21:24991240:M	AAAAAAAAAAAACGAAAAAAGAAAAGAGAAAGAAAAAAAAAGAAAAA	<46>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:136,0,154	1/1:0,28:29:255,85,0	0/0:16,1:17:0,32,255
-chr21	24997456	chr21:24997456:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,20:24:255,54,0	1/1:0,8:10:91,15,0	1/1:0,21:26:255,59,0
-chr21	25004368	chr21:25004368:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/1:13,18:31:245,0,151	1/1:0,24:24:255,70,0	0/0:30,0:30:0,88,255
-chr21	25010479	chr21:25010479:M	ACACACACACATACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:37,0:38:0,111,255	0/1:20,18:40:255,0,255	0/0:51,0:51:0,153,255
-chr21	25010667	chr21:25010667:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,5:46:0,43,255	0/0:32,2:36:0,67,255	0/1:25,21:49:255,0,255
-chr21	25018811	chr21:25018811:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,50:52:255,134,0	1/1:4,58:63:255,114,0	0/1:20,20:41:244,0,254
-chr21	25021697	chr21:25021697:M	GTTTGTTTGTTTGTTTGTTT	<6>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:33,0:33:0,97,255	0/1:24,24:48:255,0,255
-chr21	25022199	chr21:25022199:M	GGGGGGGGGGGGG	<10>,<12>	.	.	Motif=G	GT:AD:DP:PL	2/2:0,0,3:5:75,67,89,14,9,0	2/2:0,0,3:5:76,65,87,14,9,0	1/2:0,4,4:9:179,72,92,109,0,93
-chr21	25023583	chr21:25023583:M	ATTTATTTATTTATT	<4.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:47,0:47:0,139,255	0/0:53,0:53:0,156,255	0/1:23,23:46:255,0,255
-chr21	25027856	chr21:25027856:M	ACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:18,20:38:247,0,206	0/0:57,0:57:0,168,255
-chr21	25029138	chr21:25029138:M	TATATATATATATATATATATATATATATATATATATAT	<15.5>,<16.5>,<20.5>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,14,4:18:255,255,255,66,110,69,255,231,0,255	2/2:0,0,1,0:1:31,19,16,3,3,0,31,19,3,31	1/3:0,6,0,3:9:207,49,64,146,82,163,167,0,97,158
-chr21	25030087	chr21:25030087:M	TTCCTTCCTTCCTTCTTTCCTTTCTTCCTTCCTCCCTCCCTCCCTCCTTCTTCCTTCCTTCCTTGCTTCCTTCCTTTTTTCCTTCCTTC	<2.8>,<18.2>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:2,3,6:12:169,103,145,22,0,51	0/2:2,1,2:7:77,59,106,0,26,38	0/2:3,1,5:11:141,126,199,0,51,54
-chr21	25040379	chr21:25040379:M	AAAAAAAAAATAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/0:43,0:44:0,129,255	0/1:16,20:36:255,0,190
-chr21	25040543	chr21:25040543:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,23,0:28:255,0,8,255,89,255	1/1:2,25,0:27:255,45,0,255,79,255	1/2:0,20,10:30:255,174,89,255,0,255
-chr21	25052192	chr21:25052192:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:22,0,16	0/1:1,4:5:50,0,2	0/1:3,4:10:50,0,35
-chr21	25061130	chr21:25061130:M	TTATTTTTTATTTATTTATTTATTTATTTATTTATTTATTT	<13.2>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,8:8:223,24,0	1/1:0,2:2:56,6,0	0/1:9,6:15:122,0,205
-chr21	25061461	chr21:25061461:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,22:25:255,38,0	1/1:0,20:24:255,68,0	0/1:8,16:25:212,0,64
-chr21	25063956	chr21:25063956:M	CACACACACACACACACACACACACACACACACACA	<15>,<16>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,19,23:42:255,255,255,255,0,225	1/1:0,26,1:29:255,86,0,255,67,255	0/2:6,0,21:28:255,255,255,0,148,92
-chr21	25070637	chr21:25070637:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,24:27:255,43,0	1/1:2,21:26:255,38,0	0/1:14,15:30:186,0,159
-chr21	25096779	chr21:25096779:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,13:23:182,0,74	0/1:3,6:12:90,0,18	0/1:4,12:19:172,0,25
-chr21	25096945	chr21:25096945:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:31:0,69,255	0/1:15,11:27:110,0,189	0/0:30,1:31:0,74,255
-chr21	25102864	chr21:25102864:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:29:255,84,0	1/1:0,29:31:255,87,0	0/1:21,22:43:255,0,255
-chr21	25130137	chr21:25130137:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,31:33:255,61,0	1/1:1,31:34:255,82,0	0/1:15,20:36:253,0,171
-chr21	25138954	chr21:25138954:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,12:18:173,0,17	1/1:1,10:11:147,16,0	0/0:9,0:10:0,29,164
-chr21	25144016	chr21:25144016:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:13:94,0,42	0/1:1,4:5:53,0,2	0/0:7,0:7:0,21,121
-chr21	25145300	chr21:25145300:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:21:131,0,255	1/1:0,8:11:231,21,0	0/0:24,0:26:0,78,255
-chr21	25152194	chr21:25152194:M	TATATAAATATATATAAATTATATATAAATTTATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,4:30:34,0,255	0/1:4,3:7:68,0,83	0/1:17,5:26:85,0,255
-chr21	25158458	chr21:25158458:M	GAAGGAAGGAAGG	<2.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:11,15:26:220,0,136	0/0:22,0:22:0,65,255	0/1:18,17:35:222,0,236
-chr21	25162327	chr21:25162327:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,44:44:255,129,0	0/1:24,25:49:255,0,255
-chr21	25170469	chr21:25170469:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,9:19:104,0,122	0/1:10,6:17:60,0,120	0/0:18,1:22:0,46,255
-chr21	25174547	chr21:25174547:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,4:10:99,41,59,26,0,24	1/2:1,8,3:14:255,26,22,137,0,118	2/2:0,0,4:6:67,68,69,10,12,0
-chr21	25179952	chr21:25179952:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,19:38:243,0,233	1/1:0,40:41:255,120,0	0/0:41,3:45:0,77,255
-chr21	25180903	chr21:25180903:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,23:49:255,0,255	1/1:4,44:51:255,78,0	0/0:49,2:52:0,116,255
-chr21	25181034	chr21:25181034:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,19:48:222,0,255	0/0:43,2:45:0,96,255	0/1:30,23:54:255,0,255
-chr21	25181846	chr21:25181846:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<7.5>,<8>,<12.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/2:0,11,8,0:19:255,220,185,255,0,255,255,220,255,255	2/2:0,0,18,0:18:255,255,255,54,54,0,255,255,54,255	1/3:0,12,0,4:16:255,75,77,255,113,255,255,0,255,255
-chr21	25183010	chr21:25183010:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>,<21>,<23>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,15,11,0:29:255,255,255,255,0,255,255,255,255,255	2/3:0,0,10,7:18:255,255,255,191,191,153,255,255,0,241	0/1:20,14,0,0:36:255,0,255,255,255,255,255,255,255,255
-chr21	25186124	chr21:25186124:M	AAAAAAAAGAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/0:42,0:43:0,124,255	0/1:21,27:48:255,0,248
-chr21	25186446	chr21:25186446:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:117,0,63	0/0:9,0:11:0,32,174	0/1:3,4:9:54,0,37
-chr21	25187519	chr21:25187519:M	TGTTTTTTTTTTTGTTTGTTT	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:53,0:55:0,157,255	0/0:31,0:31:0,93,255	0/1:22,15:37:225,0,255
-chr21	25190702	chr21:25190702:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:91,12,0	1/1:0,0:1:14,3,0	0/1:6,4:10:79,0,140
-chr21	25194404	chr21:25194404:M	ACACATACAGACACACACACACACACACACACACACACACACA	<17.5>,<25.5>,<27.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,16,0,5:21:255,133,85,255,131,255,255,0,255,255	2/3:0,0,12,12:26:255,255,255,255,255,255,255,255,0,255	0/1:11,17,0,0:29:255,0,255,255,255,255,255,255,255,255
-chr21	25195902	chr21:25195902:M	TTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTT	<33>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,7,6:15:209,69,63,69,0,101	0/1:8,6,0:15:57,0,103,84,143,255	0/2:5,1,4:11:81,53,119,0,77,120
-chr21	25196771	chr21:25196771:M	TATATATATAGGATATATATA	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,20:34:255,0,151	1/1:0,15:16:255,46,0	0/0:52,0:52:0,154,255
-chr21	25198324	chr21:25198324:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,22:40:255,0,220	1/1:1,27:29:255,67,0	0/0:32,0:32:0,94,255
-chr21	25203356	chr21:25203356:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,22:27:255,24,0	1/1:4,20:25:255,4,0	0/1:10,7:17:76,0,129
-chr21	25210329	chr21:25210329:M	TTTTTTTCTTTTTTTTTCTTTTTTTTTTTTTTTT	<33>,<35>,<36>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,4,9,0:23:56,65,232,0,42,104,95,182,162,255	0/3:11,0,1,6:19:96,141,255,62,173,152,0,139,125,216	1/2:1,10,15,0:28:234,177,255,113,0,174,255,192,240,255
-chr21	25214217	chr21:25214217:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:25,0,8	1/1:0,7:8:113,20,0	0/1:6,5:12:59,0,65
-chr21	25223513	chr21:25223513:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,1:4:6,15,94,0,52,40	2/2:0,0,8:10:137,113,108,25,4,0	1/2:2,3,3:9:83,9,56,17,0,28
-chr21	25228145	chr21:25228145:M	ATATATATATATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,5:21:160,0,86	1/1:0,3:5:104,12,0	0/0:5,0:8:0,23,183
-chr21	25228176	chr21:25228176:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:8,2,5:17:106,34,191,0,169,202	1/2:0,1,1:2:43,12,6,11,0,6	0/1:2,7,0:9:125,0,16,77,38,104
-chr21	25232074	chr21:25232074:M	AAAAAAGAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,126,0	1/1:0,37:37:255,111,0	1/1:0,48:50:255,144,0
-chr21	25237376	chr21:25237376:M	AATAGTAATAGT	<2.7>	.	.	Motif=AATAGT	GT:AD:DP:PL	0/1:10,18:28:255,0,195	1/1:0,34:34:255,102,0	0/0:32,0:32:0,96,255
-chr21	25242694	chr21:25242694:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	1/1:0,33:35:255,102,0	0/1:21,6:30:41,0,255
-chr21	25244413	chr21:25244413:M	GTGTGTGTGTGTGTGTGT	<8>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,38:38:255,112,0	0/1:18,24:43:255,0,212
-chr21	25247870	chr21:25247870:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,1,13:30:148,215,255,0,224,211	0/0:24,2,1:27:0,45,255,61,255,255	1/2:0,13,8:22:255,148,187,226,0,255
-chr21	25259483	chr21:25259483:M	ATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATAGATAATAGATAGATA	<17.2>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:6,2:9:20,0,86	1/1:1,14:15:230,27,0	0/1:5,10:15:139,0,47
-chr21	25259585	chr21:25259585:M	ATGATGATGATGATGATGATGA	<6.3>	.	.	Motif=ATG	GT:AD:DP:PL	1/1:0,47:47:255,139,0	1/1:0,41:41:255,121,0	1/1:0,42:42:255,124,0
-chr21	25266888	chr21:25266888:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,18:20:255,41,0	1/1:3,17:21:242,11,0	1/1:0,19:20:255,58,0
-chr21	25269904	chr21:25269904:M	AAAAAGAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:27:55,0,255	0/1:8,7:18:77,0,104	0/1:4,11:19:150,0,37
-chr21	25280880	chr21:25280880:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGT	<17>,<19>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,18,17:37:255,255,255,255,0,255	1/2:0,24,5:30:255,88,57,255,0,255	0/2:12,0,16:28:203,255,255,0,212,132
-chr21	25303267	chr21:25303267:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,5:7:71,0,16	1/1:1,11:14:193,23,0	0/1:15,5:21:28,0,223
-chr21	25309386	chr21:25309386:M	ACAACAACAACAACAACAA	<7.7>	.	.	Motif=ACA	GT:AD:DP:PL	1/1:0,54:54:255,162,0	1/1:0,31:31:255,93,0	0/1:29,20:49:255,0,255
-chr21	25310083	chr21:25310083:M	ATATATATATATGTGTGTATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,5:5:61,14,0	1/1:0,2:2:24,5,0	1/1:0,6:6:73,17,0
-chr21	25317688	chr21:25317688:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,54:54:255,159,0	0/1:26,20:47:232,0,255
-chr21	25318545	chr21:25318545:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,58:58:255,174,0	1/1:0,47:48:255,144,0	0/1:22,27:51:255,0,255
-chr21	25328125	chr21:25328125:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:16:93,0,93	0/1:6,8:15:99,0,57	0/0:19,0:22:0,53,255
-chr21	25328639	chr21:25328639:M	ATATTAATATTAATTTATGTTAATTATTAATAT	<3>	.	.	Motif=ATATTA	GT:AD:DP:PL	0/1:30,12:42:192,0,255	0/1:30,6:38:52,0,255	0/1:41,7:49:43,0,255
-chr21	25330156	chr21:25330156:M	ATTATTATCATTATTATTAATTATTAT	<8>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,25:25:255,74,0	0/1:23,25:48:255,0,255
-chr21	25330181	chr21:25330181:M	ATGATAATGATA	<1.5>	.	.	Motif=ATGATA	GT:AD:DP:PL	1/1:0,39:39:255,117,0	1/1:0,38:38:255,114,0	0/1:30,30:60:255,0,255
-chr21	25332291	chr21:25332291:M	ATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:2,16,13:33:255,255,255,255,0,255	1/2:0,9,2:11:183,50,24,157,0,236	0/2:12,0,3:15:43,78,255,0,215,255
-chr21	25349188	chr21:25349188:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:19,2,0:22:4,0,255,61,255,255	0/1:3,5,0:10:100,0,76,115,64,181	0/2:16,0,8:28:123,195,255,0,255,230
-chr21	25351944	chr21:25351944:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,20:46:233,0,255	0/1:21,20:43:225,0,242	0/0:43,3:46:0,82,255
-chr21	25352085	chr21:25352085:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,23:39:255,0,172	0/1:19,18:39:210,0,229	0/0:38,0:39:0,112,255
-chr21	25368279	chr21:25368279:M	AAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:6:118,51,35,44,0,35	2/2:0,1,5:7:147,93,76,18,4,0	0/2:10,2,2:15:26,12,142,0,139,240
-chr21	25399853	chr21:25399853:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:13:83,0,67	0/1:9,3:14:10,0,129	0/1:4,6:11:79,0,37
-chr21	25420159	chr21:25420159:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,111,0	1/1:0,31:35:255,99,0	1/1:0,33:37:255,102,0
-chr21	25427328	chr21:25427328:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:37:0,109,255	0/1:28,17:45:172,0,255	0/0:55,2:57:0,131,255
-chr21	25431540	chr21:25431540:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,22:50:255,0,255	0/1:25,19:46:222,0,255	0/0:37,1:39:0,96,255
-chr21	25439922	chr21:25439922:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:33:161,0,244	0/1:18,13:33:150,0,218	0/0:37,1:41:0,101,255
-chr21	25449117	chr21:25449117:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,7:23:255,89,70,238,0,196	1/2:2,11,3:17:255,10,25,161,0,151	1/1:0,27,1:30:255,86,0,255,70,255
-chr21	25452012	chr21:25452012:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,21,7:31:255,124,129,255,0,255	1/2:0,11,12:23:255,203,255,255,0,255	2/2:1,0,29:31:255,255,255,73,92,0
-chr21	25453066	chr21:25453066:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,4:5:55,58,83,0,17,3	2/2:0,0,3:3:50,50,50,9,9,0	1/2:2,3,4:9:93,23,63,17,0,25
-chr21	25477440	chr21:25477440:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:161,0,179	0/0:37,1:39:0,97,255	0/1:16,20:37:255,0,180
-chr21	25496834	chr21:25496834:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,19:21:255,25,0	0/1:16,15:33:165,0,195	1/1:1,17:19:255,38,0
-chr21	25510247	chr21:25510247:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:19:199,0,9	0/1:5,3:9:24,0,69	1/1:2,8:14:131,2,0
-chr21	25511959	chr21:25511959:M	ATATATATATATATATATATA	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:22,2:26:0,36,255	0/0:12,0:13:0,38,250	0/1:12,7:19:85,0,185
-chr21	25514771	chr21:25514771:M	ATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGA	<11.2>,<13.2>	.	.	Motif=ATGG	GT:AD:DP:PL	1/2:1,11,9:21:255,152,202,190,0,255	1/1:0,33,0:33:255,97,0,255,99,255	2/2:0,0,22:22:255,255,255,65,66,0
-chr21	25524688	chr21:25524688:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,49:51:255,131,0	0/1:8,13:23:183,0,74	1/1:1,27:31:255,72,0
-chr21	25534823	chr21:25534823:M	ACACACACACACACACACACACACACACACACACA	<9.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,7:22:137,184,255,0,255,255	1/2:0,15,8:30:255,194,137,255,0,255	0/0:18,0,0:30:0,85,255,17,255,255
-chr21	25535422	chr21:25535422:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:26:0,41,255	0/1:11,5:20:36,0,137	0/0:25,3:28:0,31,255
-chr21	25540122	chr21:25540122:M	AATAATAATAATAATAATAA	<5.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:40,0:42:0,102,255	0/1:16,13:30:160,0,203	0/0:45,1:48:0,101,255
-chr21	25547348	chr21:25547348:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<24>,<27>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11,0:14:208,40,0,240,41,255	0/2:2,1,4:12:109,84,109,0,7,64	1/1:2,9,0:13:132,6,0,164,38,255
-chr21	25552832	chr21:25552832:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/0:33,4:38:0,41,255	0/1:17,15:35:189,0,214
-chr21	25559376	chr21:25559376:M	TTTTTTTTTTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:12:0,33,255	0/1:4,3:7:59,0,86	0/0:5,0:6:0,17,141
-chr21	25562048	chr21:25562048:M	GGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/1:7,3:12:19,0,92	0/0:20,0:21:0,58,255
-chr21	25566946	chr21:25566946:M	TCTCTCTCTCTCTCT	<6.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:16,25:42:255,0,165	0/0:34,0:34:0,100,255
-chr21	25572109	chr21:25572109:M	ATATATATATATATATATATAT	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:14,2:19:0,17,57	0/1:6,8:17:7,0,15	0/0:19,0:20:0,35,95
-chr21	25572130	chr21:25572130:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12,0:29:255,0,235,139,255,255	1/2:0,4,5:13:255,73,37,76,0,47	0/0:21,0,0:24:0,50,255,66,255,255
-chr21	25573530	chr21:25573530:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,46:46:255,136,0	0/1:22,21:45:254,0,255	1/1:0,34:34:255,100,0
-chr21	25575777	chr21:25575777:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,67,0	0/1:11,13:25:164,0,118	1/1:1,32:35:255,82,0
-chr21	25576486	chr21:25576486:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<11>,<12>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,12,14,0:27:255,233,153,214,0,135,255,233,214,255	1/3:0,15,0,22:39:255,255,255,255,255,255,255,0,237,255	2/2:0,0,38,0:38:255,255,255,114,111,0,255,255,114,255
-chr21	25577031	chr21:25577031:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,53:55:255,143,0	1/1:0,55:56:255,164,0	1/1:0,36:38:255,111,0
-chr21	25577094	chr21:25577094:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,52:56:255,127,0	1/1:0,35:35:255,103,0	1/1:1,36:38:255,87,0
-chr21	25581342	chr21:25581342:M	CTTTCTTTCTTTCTTT	<1.5>,<1.8>	.	.	Motif=CTTT	GT:AD:DP:PL	2/2:0,0,3:7:165,46,26,21,0,0	1/2:0,0,0:5:83,25,12,19,0,5	1/1:0,3,0:5:124,14,0,41,4,26
-chr21	25581355	chr21:25581355:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:50,9,0	1/1:0,2:3:45,9,0	0/1:1,1:3:21,0,8
-chr21	25581993	chr21:25581993:M	TATATATATATATCTTATATATATACACTATTATATATATA	<21>,<22>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,3,4:12:72,44,37,2,0,33	1/1:0,2,0:3:6,3,0,10,4,22	1/2:1,1,4:6:46,39,34,0,0,9
-chr21	25582033	chr21:25582033:M	ACACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:18,0:21:0,62,255	0/1:5,3:11:38,0,97	0/0:13,0:16:0,47,255
-chr21	25584863	chr21:25584863:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,10:20:125,0,125	0/1:9,18:31:249,0,73	0/0:23,3:30:0,18,255
-chr21	25588312	chr21:25588312:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,91,0	0/1:21,17:39:188,0,255	1/1:0,47:48:255,141,0
-chr21	25589422	chr21:25589422:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:23:255,63,0	1/1:0,37:40:255,111,0	1/1:0,32:35:255,96,0
-chr21	25591080	chr21:25591080:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:39:255,116,0	1/1:0,13:14:255,42,0	1/1:0,40:41:255,123,0
-chr21	25594250	chr21:25594250:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,4:12:222,52,31,108,0,78	0/2:0,0,1:4:4,13,47,0,30,24	1/1:0,9,0:10:255,30,0,177,29,152
-chr21	25596675	chr21:25596675:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,48:50:255,149,0	0/1:25,23:51:255,0,255	1/1:0,54:55:255,162,0
-chr21	25598857	chr21:25598857:M	AAAAAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24,0:30:255,78,0,255,86,255	1/2:2,15,10:31:255,146,239,255,0,255	1/1:0,28,0:32:255,95,0,255,95,255
-chr21	25600396	chr21:25600396:M	AAAAAAAAAAAAAAAAAAAAAA	<23>,<26>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,1:4:56,55,54,9,9,0	1/1:0,4,0:4:66,12,0,78,12,118	2/2:0,0,5:5:141,141,141,15,15,0
-chr21	25600576	chr21:25600576:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:24:255,72,0	0/1:14,9:28:174,0,255	1/1:0,23:24:255,69,0
-chr21	25611041	chr21:25611041:M	AAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,91,255	0/1:21,15:38:161,0,255	0/0:30,1:33:0,78,255
-chr21	25612118	chr21:25612118:M	TATATATATATATACGTATATATATACGTATATATA	<12>,<19>	.	.	Motif=TA	GT:AD:DP:PL	0/2:12,0,8:20:97,155,255,0,231,175	0/1:10,20,1:31:255,0,227,255,162,255	2/2:0,0,16:21:255,255,255,47,48,0
-chr21	25613552	chr21:25613552:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,23,0:39:255,0,159,255,255,255	0/2:8,2,11:21:250,250,255,0,103,187	1/1:0,31,0:34:255,97,0,255,99,255
-chr21	25614426	chr21:25614426:M	AAAAAAAAAAAAAAAACAAAAACAAAAAACAAACAAACAAAAAAAAACAAAGAAAAAAAGAAAAAAGAAAAGAAAAAGAAAAAA	<78>,<79>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:57,41,36,6,6,0	1/1:0,6,0:6:178,18,0,119,18,103	2/2:0,0,4:5:126,90,78,14,14,0
-chr21	25615130	chr21:25615130:M	CTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16>,<17>,<23>	.	.	Motif=CT	GT:AD:DP:PL	1/2:0,13,10,0:24:255,190,118,255,0,190,255,190,255,255	2/3:0,1,17,15:33:255,255,255,255,255,255,255,255,0,255	1/1:0,24,0,0:27:255,80,0,255,78,255,255,80,255,255
-chr21	25625815	chr21:25625815:M	AATAATAATAATAAT	<4>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,3:3:58,9,0	.	.
-chr21	25631295	chr21:25631295:M	TCTTTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTT	<4.8>	.	.	Motif=TCTTTT	GT:AD:DP:PL	1/1:0,23:24:255,70,0	0/1:4,7:11:94,0,40	1/1:0,13:14:248,40,0
-chr21	25633261	chr21:25633261:M	AAAAAAAAAAGAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:36:0,69,255	0/1:24,20:44:222,0,255	0/0:37,0:37:0,109,255
-chr21	25633939	chr21:25633939:M	AAAAAAAAAAAAAAA	<17>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,1,4:5:133,133,132,69,69,56,18,18,0,3	1/1:1,10,1,0:15:255,8,0,242,10,255,255,29,255,255	2/3:0,0,7,4:11:255,255,255,69,69,37,120,119,0,88
-chr21	25640796	chr21:25640796:M	CTTTCTCTTTCTTCTTTCTTTCTCTCTCTCTTTCT	<6.5>	.	.	Motif=CTTTCT	GT:AD:DP:PL	1/1:0,12:19:165,34,0	0/0:11,0:17:0,31,152	1/1:0,21:25:255,59,0
-chr21	25641596	chr21:25641596:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,45:45:255,133,0	0/1:23,18:42:201,0,255	1/1:0,39:39:255,115,0
-chr21	25644867	chr21:25644867:M	TTTGTTTGTTTGTTTGTTTGTTTGTTT	<5.8>,<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,31,0:31:255,92,0,255,93,255	1/2:0,19,15:34:255,255,255,255,0,255	1/1:0,36,0:36:255,106,0,255,108,255
-chr21	25648444	chr21:25648444:M	GTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:10,13:26:255,0,212	0/0:30,0:32:0,95,255
-chr21	25651062	chr21:25651062:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,3,3:10:31,7,54,18,0,71	0/1:4,0,1:8:6,0,42,11,28,55	1/2:1,1,2:5:26,15,38,13,0,30
-chr21	25655915	chr21:25655915:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,1:49:0,126,255	0/1:27,21:50:225,0,255	0/0:36,3:40:0,62,255
-chr21	25659255	chr21:25659255:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,25:36:255,0,61	0/1:21,17:39:187,0,255	1/1:0,34:35:255,102,0
-chr21	25660760	chr21:25660760:M	ATATATATATATATATATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,5:11:75,0,93	.	0/1:5,3:12:29,0,141
-chr21	25669372	chr21:25669372:M	AAAAAAAAGAAAAAAAAGAAAAAAAGAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/1:7,16:23:255,0,125	0/0:31,0:31:0,93,255
-chr21	25680769	chr21:25680769:M	TGGATGGATGGATGGATGGATGGATGACGATCGATGGATGGATGGATGGATGG	<12.2>	.	.	Motif=TGGA	GT:AD:DP:PL	0/1:12,15:27:205,0,151	0/0:16,0:16:0,47,255	1/1:0,25:26:255,76,0
-chr21	25685525	chr21:25685525:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0,0:3:0,9,85,9,60,52	0/2:3,0,4:7:46,55,127,0,49,29	1/2:1,3,3:8:104,26,38,42,0,39
-chr21	25686445	chr21:25686445:M	TATGTGTATGTGT	<1.8>	.	.	Motif=TATGTG	GT:AD:DP:PL	0/1:23,27:50:255,0,255	0/0:39,0:39:0,117,255	1/1:0,53:53:255,159,0
-chr21	25688244	chr21:25688244:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<21>,<26>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,13,0:27:255,0,255,255,255,255	0/2:9,0,7:20:149,180,255,0,243,226	1/1:0,18,0:18:255,54,0,255,54,255
-chr21	25688291	chr21:25688291:M	CACACGCACGCACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,18:39:219,0,255	0/0:33,0:34:0,97,255	1/1:0,24:24:255,71,0
-chr21	25689013	chr21:25689013:M	TTTTTTGTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,20:35:255,0,146	0/0:48,0:49:0,143,255	1/1:0,45:46:255,135,0
-chr21	25692007	chr21:25692007:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,9:22:187,161,255,0,223,255	0/1:14,8,0:22:75,0,180,117,241,255	2/2:0,1,15:18:255,255,255,50,34,0
-chr21	25694836	chr21:25694836:M	AAAAAAAAAAAAAATAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,2:30:0,51,255	0/1:12,8:23:94,0,145	0/0:25,1:27:0,61,255
-chr21	25694969	chr21:25694969:M	TTTTTCTTTCTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,12:18:166,0,57	0/0:17,1:19:0,38,255	1/1:3,20:24:255,6,0
-chr21	25697008	chr21:25697008:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:11:0,32,198	0/1:7,2:10:5,0,100	0/1:9,3:12:17,0,123
-chr21	25697952	chr21:25697952:M	CTCTCTCTCTCGCTCTCTCTC	<9.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:33,1:35:0,82,255	0/0:33,0:33:0,90,255	0/1:13,16:31:108,0,76
-chr21	25700317	chr21:25700317:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,1:49:0,126,255	0/1:23,17:42:190,0,255	0/0:46,1:47:0,120,255
-chr21	25701925	chr21:25701925:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,3:40:0,63,255	0/1:17,24:42:255,0,180	0/0:37,2:40:0,82,255
-chr21	25703769	chr21:25703769:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:51:255,139,0	0/1:16,17:39:255,0,255	1/1:0,25:35:255,101,0
-chr21	25715986	chr21:25715986:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9,1:10:172,29,0,145,12,142	1/2:0,3,3:6:123,51,34,42,0,33	0/1:2,4,1:8:61,0,15,41,18,93
-chr21	25720457	chr21:25720457:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:15:234,26,0	1/1:1,10:12:143,7,0	0/1:3,12:15:167,0,9
-chr21	25731407	chr21:25731407:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:19:255,55,0	1/1:0,27:27:255,78,0	1/1:0,34:34:255,99,0
-chr21	25742760	chr21:25742760:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,33:34:255,255,255,82,100,0	1/2:0,17,12:30:255,178,124,255,0,224	2/2:0,0,33:33:255,255,255,97,97,0
-chr21	25743585	chr21:25743585:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,3:34:0,44,255	0/1:12,19:33:239,0,116	0/0:30,2:35:0,66,255
-chr21	25744043	chr21:25744043:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:12:9,0,121	0/0:1,0:1:0,3,17	1/1:1,7:9:101,6,0
-chr21	25746010	chr21:25746010:M	TTTTTTTTTTTCTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,2:40:0,81,255	0/1:16,19:35:234,0,180	0/0:36,0:36:0,106,255
-chr21	25755433	chr21:25755433:M	AAAAAAAAAAAAAAAAAAAAA	<15>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0,1:7:0,21,182,3,106,87	0/2:4,0,6:10:70,98,250,0,67,38	1/2:1,14,2:18:255,9,16,255,0,255
-chr21	25756195	chr21:25756195:M	TTTTTATTTTTA	<1.3>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/1:21,34:55:255,0,255	0/1:25,21:46:255,0,255	0/0:47,0:47:0,141,255
-chr21	25775232	chr21:25775232:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:48:0,132,255	0/1:21,15:38:174,0,255	0/0:48,2:50:0,111,255
-chr21	25780241	chr21:25780241:M	TGAATGAATGA	<1.8>	.	.	Motif=TGAA	GT:AD:DP:PL	0/0:49,0:49:0,145,255	0/1:24,22:46:255,0,255	0/0:38,0:38:0,112,255
-chr21	25784517	chr21:25784517:M	GTTTGTTTGTTT	<2.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:21,0:22:0,35,97	0/1:15,17:36:33,0,10	0/0:26,0:26:0,46,125
-chr21	25784526	chr21:25784526:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:17:0,16,215	0/1:4,17:23:214,0,9	0/0:19,1:20:0,42,255
-chr21	25785745	chr21:25785745:M	TTTTCTTTTCTT	<1.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,49:49:255,147,0	1/1:0,39:39:255,117,0
-chr21	25786151	chr21:25786151:M	AAAAAAAAAAAAA	<11>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,0,24:44:255,255,255,0,255,235	0/1:18,22,0:42:255,0,255,255,255,255	0/2:23,0,24:49:255,255,255,0,255,255
-chr21	25789328	chr21:25789328:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:20:0,23,255	0/0:20,3:25:0,3,255	0/1:17,7:27:46,0,255
-chr21	25797941	chr21:25797941:M	AAAAAAAAAAAAATAAATAAATAAATAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,74,255	0/1:12,7:19:125,0,255	0/0:21,0:22:0,65,255
-chr21	25800869	chr21:25800869:M	CAAAAAAACAAACAAACAAA	<4>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:21,15:36:181,0,255	0/0:40,0:40:0,118,255	1/1:0,31:31:255,92,0
-chr21	25800972	chr21:25800972:M	TTTTTTTCTTTTCTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:17,14:33:169,0,203	0/0:16,1:17:0,32,255
-chr21	25804875	chr21:25804875:M	CCCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/1:10,8:18:192,0,210	0/0:19,0:19:0,57,255
-chr21	25805640	chr21:25805640:M	TGTTTTTTTTTGTTTTGTTTTGTTTTGTTTTTTTT	<6.4>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:14,21:36:255,0,255	0/1:12,19:32:255,0,228
-chr21	25808500	chr21:25808500:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:26:188,0,255	0/1:9,7:18:148,0,186	0/1:11,7:20:134,0,243
-chr21	25809875	chr21:25809875:M	CTCTCTCTCTCGCTTTCTCTCTC	<6.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:21,25:46:255,0,255	0/1:12,29:41:255,0,206	0/0:33,0:33:0,99,255
-chr21	25815569	chr21:25815569:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:5:18,0,27	0/1:7,3:11:15,0,86	0/1:7,4:12:37,0,76
-chr21	25816582	chr21:25816582:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:41:255,0,253	0/1:19,13:32:136,0,241	0/0:48,0:49:0,144,255
-chr21	25819113	chr21:25819113:M	TTTTTCTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:19,0:20:0,58,255	0/1:8,10:20:120,0,103
-chr21	25819625	chr21:25819625:M	ACACACACACACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:7,10:18:245,0,153	0/1:1,12:18:255,0,27	0/1:4,12:17:255,0,66
-chr21	25825746	chr21:25825746:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:33:167,0,250	1/1:0,27:27:255,79,0	0/1:27,23:51:255,0,255
-chr21	25826419	chr21:25826419:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,8,3:17:143,8,54,129,0,242	1/1:2,17,0:25:255,37,0,255,68,255	0/2:5,0,7:14:107,142,255,0,75,49
-chr21	25830138	chr21:25830138:M	AAATAAATAAATAAATAAATAAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:35,0:35:0,103,255	0/1:15,13:28:162,0,200
-chr21	25836137	chr21:25836137:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:34,6,0	0/1:1,4:6:50,0,2	1/1:0,3:4:50,9,0
-chr21	25855579	chr21:25855579:M	AAAAAAAAAAAAA	<10>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10,7:30:184,0,255,158,67,255	0/1:10,9,4:28:162,0,255,159,91,255	0/2:20,5,10:36:31,3,255,0,128,162
-chr21	25855607	chr21:25855607:M	ACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:37:0,90,255	0/1:15,10:35:35,0,196	0/0:26,0:34:0,76,255
-chr21	25860626	chr21:25860626:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3,1:8:68,0,65,38,38,73	1/2:1,3,4:8:111,40,57,33,0,28	0/1:5,4,2:14:109,0,107,63,57,119
-chr21	25865507	chr21:25865507:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,7,0:14:205,0,140,133,160,255	1/1:0,5,0:10:245,27,0,182,27,166	0/2:4,3,6:16:201,51,151,0,63,95
-chr21	25866543	chr21:25866543:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,7:16:84,0,99	1/1:2,12:16:177,3,0	0/1:17,12:30:130,0,230
-chr21	25867440	chr21:25867440:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,4,8:20:140,42,197,0,35,64	1/2:0,14,7:22:255,101,56,246,0,187	0/2:5,1,10:17:144,130,255,0,76,48
-chr21	25873196	chr21:25873196:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6,0:17:57,0,131,89,173,255	1/2:2,5,5:12:152,49,49,37,0,72	0/1:9,7,0:18:71,0,118,102,163,255
-chr21	25873977	chr21:25873977:M	TTTTTTTTTTTTTTTTT	<18>,<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/3:1,7,0,5:14:227,120,112,178,89,191,107,0,134,185	0/2:1,0,5,1:7:142,95,95,0,17,9,68,71,10,79	1/3:1,11,2,6:21:255,163,136,231,85,234,181,0,172,255
-chr21	25877608	chr21:25877608:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<8>,<9>	.	.	Motif=TAAA	GT:AD:DP:PL	1/2:0,13,3:16:255,50,11,250,0,207	1/1:0,14,0:14:255,42,0,255,41,255	1/2:0,19,10:29:255,161,104,255,0,255
-chr21	25880010	chr21:25880010:M	TTTATTTATTTATTTATTTATTTATTTATTTATT	<6.5>,<9.5>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,4,4:8:169,76,93,104,0,93	1/1:0,6,0:6:168,18,0,170,18,171	1/2:0,3,3:6:125,56,71,78,0,69
-chr21	25887518	chr21:25887518:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,15:29:255,0,63	0/1:2,11:19:255,0,43	0/1:5,12:22:255,0,88
-chr21	25890723	chr21:25890723:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:171,21,0	0/1:5,3:9:52,0,122	1/1:0,6:8:176,23,0
-chr21	25892047	chr21:25892047:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,9,7:20:255,72,92,133,0,119	1/2:1,9,7:17:255,84,82,136,0,106	1/2:1,17,10:29:255,132,103,255,0,229
-chr21	25892950	chr21:25892950:M	AAAAAAAAAAAACAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,14:28:255,255,184,255,0,184	0/2:14,0,15:29:255,255,255,0,255,255	1/2:0,17,16:33:255,255,199,255,0,218
-chr21	25895111	chr21:25895111:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/1:20,26:50:255,0,255	0/1:25,28:56:255,0,255
-chr21	25895177	chr21:25895177:M	TTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:21:255,0,159	0/1:12,17:29:255,0,249	0/1:12,16:29:255,0,250
-chr21	25896414	chr21:25896414:M	ACACTCACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:21,24:47:219,0,185	0/1:17,17:38:138,0,156	0/1:22,21:43:181,0,195
-chr21	25900988	chr21:25900988:M	AAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:7,16:24:255,0,132	1/1:0,23:23:255,69,0
-chr21	25901297	chr21:25901297:M	AAAAAAAAAAAAAAAAAAAAAACAAAA	<15>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,1:6:83,83,83,15,15,0	1/1:0,21,1:24:255,66,0,255,27,255	2/2:0,0,3:4:101,101,101,12,12,0
-chr21	25901399	chr21:25901399:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47:48:255,141,0	0/1:23,25:48:255,0,255	1/1:1,46:49:255,115,0
-chr21	25908693	chr21:25908693:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,30:36:255,0,4	1/1:3,30:34:255,44,0	1/1:5,35:40:255,28,0
-chr21	25924380	chr21:25924380:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,15:18:223,0,2	1/1:2,16:18:244,18,0	1/1:1,10:11:162,14,0
-chr21	25927003	chr21:25927003:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:10,3,0	.	1/1:0,3:3:78,9,0
-chr21	25928343	chr21:25928343:M	AAACAAACAAACAAACAAACAAACAAACAAAAAAAC	<10>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:1,26:27:255,61,0	1/1:0,27:27:255,80,0
-chr21	25928754	chr21:25928754:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:18:255,45,0	1/1:0,14:18:255,50,0	1/1:0,20:26:255,43,0
-chr21	25930587	chr21:25930587:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,27:28:255,82,0	0/1:17,9:26:84,0,229	0/1:17,15:32:182,0,222
-chr21	25935840	chr21:25935840:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:44,8,0	1/1:0,5:5:81,15,0	0/1:1,3:4:39,0,5
-chr21	25946667	chr21:25946667:M	AAAAATAAAAATAAAAATAAAAATAAAAATAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:233,0,255	0/0:29,0:29:0,87,255	0/1:17,18:35:255,0,255
-chr21	25951141	chr21:25951141:M	GGCCAGGGCCAG	<2.2>	.	.	Motif=GGCCAG	GT:AD:DP:PL	1/1:0,35:35:255,97,0	1/1:0,49:49:255,136,0	1/1:0,50:50:255,138,0
-chr21	25952192	chr21:25952192:M	ACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,8:28:55,0,250	0/1:22,12:35:94,0,255	0/1:17,10:27:88,0,204
-chr21	25952379	chr21:25952379:M	TTTTTTTTTTTCTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,40:43:255,71,0	1/1:2,27:29:255,50,0	1/1:2,31:33:255,61,0
-chr21	25964595	chr21:25964595:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,13:16:186,0,7	0/1:3,4:7:48,0,31	0/1:7,10:17:126,0,73
-chr21	25968323	chr21:25968323:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,3:16:3,0,169	0/0:11,1:12:0,19,159	0/1:8,5:14:41,0,99
-chr21	25969834	chr21:25969834:M	GAAAAGAAAAGAAAAGAAAACAAAAGAAAAGAAAAGAAAAGAGAAAAGAAAAGAGAAGA	<12.8>	.	.	Motif=GAAAA	GT:AD:DP:PL	1/1:0,5:6:89,17,0	1/1:0,4:5:74,14,0	0/0:6,1:7:0,5,80
-chr21	25980661	chr21:25980661:M	AAACAAACAAACAAAAAACAAAACAAACAAACAAAAAACA	<9.2>,<10.2>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,0,48:48:255,255,255,144,142,0	1/2:0,12,23:35:255,255,255,217,0,116	2/2:0,0,28:28:255,255,255,84,83,0
-chr21	25981712	chr21:25981712:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:12:17,0,120	0/1:11,10:22:103,0,120	0/1:12,3:18:6,0,172
-chr21	25989923	chr21:25989923:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,3:43:0,71,255	0/1:20,28:49:255,0,221	0/0:44,3:47:0,84,255
-chr21	25990438	chr21:25990438:M	AGCAATAGCAATA	<2.7>	.	.	Motif=AGCAAT	GT:AD:DP:PL	0/0:43,0:43:0,129,255	0/1:20,21:41:255,0,255	0/0:47,0:47:0,141,255
-chr21	25992388	chr21:25992388:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:7,25:33:255,0,35	0/0:28,0:31:0,90,255
-chr21	25995945	chr21:25995945:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:26,14:42:135,0,255	0/0:46,0:46:0,136,255
-chr21	25998391	chr21:25998391:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,2,12:27:150,187,255,0,149,161	0/1:11,14,2:29:174,0,130,215,125,255	0/2:15,1,10:27:110,166,255,0,206,200
-chr21	26007431	chr21:26007431:M	TATATTTATAAATTATATATTATATACTATATATTACAATATATAATTATATA	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:7,3:12:99,0,151	0/0:1,0:1:0,3,25	0/1:6,1:7:21,0,128
-chr21	26009580	chr21:26009580:M	TTTTTCTTTTCTTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,20:22:255,43,0	0/1:14,16:31:195,0,154	1/1:1,22:23:255,50,0
-chr21	26012976	chr21:26012976:M	AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAACAAACAAAA	<7>	.	.	Motif=AACAA	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,26:26:255,78,0	1/1:0,30:30:255,90,0
-chr21	26013483	chr21:26013483:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:2,42:46:255,99,0	1/1:1,43:46:255,108,0
-chr21	26016931	chr21:26016931:M	GGGGGGCGGGGGGCGGGGGGCGGGGGG	<10>,<19>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,26,0:26:255,78,0,255,78,255	1/2:0,11,4:15:255,104,71,255,0,255	1/1:0,37,0:37:255,111,0,255,111,255
-chr21	26017199	chr21:26017199:M	AAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:119,12,0	1/1:0,1:2:29,3,0	1/1:0,3:4:88,10,0
-chr21	26017410	chr21:26017410:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:115,20,0	0/1:3,12:15:158,0,7	1/1:0,7:9:131,23,0
-chr21	26021047	chr21:26021047:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:13:215,38,0	0/1:4,6:11:79,0,35	1/1:1,5:8:80,3,0
-chr21	26028177	chr21:26028177:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:25:0,42,255	0/1:12,11:25:135,0,130	0/0:26,2:30:0,52,255
-chr21	26032795	chr21:26032795:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,25,15:40:255,198,123,255,0,255	2/2:0,0,21:21:255,255,255,61,61,0	0/1:14,22,1:37:255,0,255,255,201,255
-chr21	26034639	chr21:26034639:M	AAAAAAAAAAAGAAAAAGAAAAAGAAAAAAAGAAAAGAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:172,17,0	1/1:1,10:14:183,23,0	1/1:0,6:7:114,20,0
-chr21	26040606	chr21:26040606:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:12:82,0,47	0/1:10,6:16:56,0,125	0/1:14,4:18:18,0,195
-chr21	26040762	chr21:26040762:M	AAACAAACAAACAAACAAACAAACAAACA	<8.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/1:17,17:34:209,0,209	0/1:15,18:33:242,0,185
-chr21	26054621	chr21:26054621:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:96,17,0	0/1:4,4:8:42,0,42	0/1:3,2:7:13,0,53
-chr21	26057467	chr21:26057467:M	CACACACCACACACACACACACACACACACACAC	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:30:0,85,255	0/1:15,18:36:213,0,187	0/0:23,0:24:0,70,255
-chr21	26059891	chr21:26059891:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,0,0	.	1/1:0,4:6:145,18,0
-chr21	26062231	chr21:26062231:M	ACACACACACACACACACACACACACACA	<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,11:25:195,0,255	0/1:14,7:22:125,0,255	0/0:27,0:30:0,74,255
-chr21	26062662	chr21:26062662:M	AAATAAATAAATAAATAAATAAATAAATAAATA	<9.2>,<11.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,12,3:15:255,79,43,229,0,255	0/2:11,0,6:17:127,157,255,0,198,255	1/1:0,20,0:20:255,59,0,255,60,255
-chr21	26068364	chr21:26068364:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:20:90,0,255	0/1:11,13:28:255,0,217	0/0:18,1:20:0,30,255
-chr21	26074751	chr21:26074751:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,23:43:255,0,235	1/1:0,40:40:255,117,0	0/1:22,21:43:246,0,255
-chr21	26077063	chr21:26077063:M	AAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,14:21:255,24,0	1/1:0,18:19:255,53,0	1/1:1,19:20:255,41,0
-chr21	26079045	chr21:26079045:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,1,2:9:9,17,121,0,71,93	0/1:1,3,0:6:38,0,6,42,6,81	0/2:6,1,5:13:51,59,183,0,61,80
-chr21	26080770	chr21:26080770:M	AAAAAAAAAAAAAAAGAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:16,12:28:120,0,188	0/0:22,1:24:0,50,255
-chr21	26082231	chr21:26082231:M	AAATAAATAAATAAATAAATAA	<6.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:19,9:28:83,0,255	0/1:15,26:41:255,0,162
-chr21	26084228	chr21:26084228:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:23,5,0	1/1:0,3:4:99,12,0	.
-chr21	26086563	chr21:26086563:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,45,0:46:255,117,0,255,135,255	1/2:1,19,21:41:255,255,249,255,0,225	1/1:3,28,4:35:255,48,0,255,29,255
-chr21	26105069	chr21:26105069:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,6:10:84,89,177,2,22,0	1/2:0,5,3:10:193,47,51,129,0,108	0/2:3,0,4:10:53,58,181,0,49,27
-chr21	26108608	chr21:26108608:M	CGGGTGCGGGTG	<1.8>	.	.	Motif=CGGGTG	GT:AD:DP:PL	1/1:0,40:40:255,111,0	1/1:0,48:48:255,133,0	1/1:0,43:43:255,119,0
-chr21	26111088	chr21:26111088:M	AAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,0:11:0,33,255	0/1:2,5:10:124,0,51	0/0:5,0:8:0,23,179
-chr21	26118885	chr21:26118885:M	AAAAAAAAATGAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:33:211,0,189	0/1:16,17:38:198,0,190	0/1:22,13:36:137,0,255
-chr21	26119686	chr21:26119686:M	ACACACACACACACACACACATATACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,19:39:248,0,255	0/1:24,17:41:184,0,255	0/1:14,11:26:128,0,192
-chr21	26126978	chr21:26126978:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,16:29:213,0,157	0/0:38,0:39:0,112,255	0/1:24,11:38:90,0,255
-chr21	26127200	chr21:26127200:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,16:35:199,0,255	0/1:22,23:46:255,0,255	0/1:20,28:50:255,0,231
-chr21	26131906	chr21:26131906:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:37:0,108,255	0/1:22,15:39:255,0,255	0/0:44,0:48:0,138,255
-chr21	26136134	chr21:26136134:M	AAAGAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAAGAAA	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,7:7:78,19,0	.	1/1:0,4:4:44,11,0
-chr21	26138527	chr21:26138527:M	AAAAAAAAAAAAAAAAA	<14>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,11,9:20:255,255,255,143,166,110,204,175,0,148	1/3:1,18,1,12:32:255,194,255,255,203,255,255,0,255,255	2/3:2,0,17,8:27:255,255,255,88,164,91,255,255,0,232
-chr21	26138695	chr21:26138695:M	AAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAA	<6.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/1:15,15:30:184,0,184	0/0:41,0:41:0,121,255
-chr21	26139880	chr21:26139880:M	AAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAA	<8.5>,<9.5>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,1,32:33:255,255,255,97,78,0	1/2:0,15,14:29:255,216,171,255,0,189	2/2:0,1,31:32:255,255,255,94,76,0
-chr21	26150598	chr21:26150598:M	TAGATAGACAGATAGATAGACAGATAGATAGA	<10>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:9,7:19:120,0,166	0/1:10,1:20:3,0,196	0/1:10,20:33:255,0,148
-chr21	26153456	chr21:26153456:M	TTGTTGTTGTTGTTGTT	<6.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:11,12:23:164,0,145	0/0:35,0:35:0,103,255	0/1:13,21:34:255,0,144
-chr21	26156001	chr21:26156001:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,4:11:46,0,72	0/0:6,1:8:0,6,92	0/1:3,3:9:39,0,37
-chr21	26162910	chr21:26162910:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,7:25:59,0,255	0/0:36,0:40:0,116,255	0/1:24,14:38:148,0,255
-chr21	26163066	chr21:26163066:M	AAAAAAAAAAAAAACAAAAACAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,10:23:115,0,171	0/1:15,17:34:198,0,180	0/1:9,4:13:33,0,123
-chr21	26164856	chr21:26164856:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:9,11:22:139,0,88	0/0:23,1:25:0,56,255
-chr21	26164894	chr21:26164894:M	AAAAAAAGAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:151,0,187	0/0:42,1:44:0,111,255	0/1:12,13:26:163,0,153
-chr21	26166872	chr21:26166872:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAAAGAGACAGAG	<19.5>,<20.5>	.	.	Motif=GA	GT:AD:DP:PL	0/2:9,3,9:23:255,74,255,0,207,205	0/1:7,12,0:19:255,0,142,128,174,255	0/2:4,0,15:22:255,162,255,0,132,92
-chr21	26166928	chr21:26166928:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<15>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,13,1:35:121,0,205,194,255,255	0/2:11,0,12:23:243,255,255,0,164,225	0/1:16,18,0:36:189,0,148,255,248,255
-chr21	26172797	chr21:26172797:M	AAAAAAAAGAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:41:255,121,0	1/1:1,33:34:255,82,0	0/1:17,17:34:214,0,216
-chr21	26180161	chr21:26180161:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:17:55,0,143	0/0:13,1:15:0,27,210	0/1:9,10:21:122,0,96
-chr21	26186140	chr21:26186140:M	TTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTT	<39>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:88,15,0	0/1:3,2:7:22,0,41	0/1:4,4:9:43,0,54
-chr21	26192948	chr21:26192948:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,21:40:255,0,243	0/1:17,10:27:100,0,225	0/0:38,0:38:0,112,255
-chr21	26193424	chr21:26193424:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,2:21:0,25,255	0/1:10,10:24:143,0,103	0/1:14,12:26:137,0,173
-chr21	26193552	chr21:26193552:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:13:0,4,254	0/1:8,11:21:255,0,164	0/1:9,8:18:173,0,204
-chr21	26193721	chr21:26193721:M	TTTTTTTTGTTCTGTTTTTTTTTTTTTTTTT	<45>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:7:98,13,0	1/1:0,0:4:0,0,0	1/1:0,8:12:235,27,0
-chr21	26194289	chr21:26194289:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:22,0,30:52:255,255,255,0,255,255	0/1:12,22,1:37:255,0,255,255,211,255	1/2:0,21,19:40:255,255,234,255,0,255
-chr21	26197508	chr21:26197508:M	ATACATACATACATACATACATACATACATACATACATACATGCATACATA	<8.8>,<10.8>,<11.8>	.	.	Motif=ATAC	GT:AD:DP:PL	2/3:0,0,9,14:23:255,255,255,189,230,162,146,147,0,80	1/3:0,12,2,16:30:255,255,255,255,219,255,255,0,255,255	1/2:0,15,8,0:24:255,206,161,255,0,255,255,127,255,255
-chr21	26198424	chr21:26198424:M	AAAAAAAAAAAAAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,15:25:200,0,97	1/1:0,24:24:255,70,0	0/1:19,14:34:155,0,239
-chr21	26198462	chr21:26198462:M	TTTCTTTTTTTTTCTTTT	<1.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:14,16:31:255,0,255	0/1:19,17:36:255,0,255	1/1:0,46:46:255,138,0
-chr21	26202002	chr21:26202002:M	AACAACAACAA	<2.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:15,29:44:255,0,161	0/0:46,0:46:0,135,255	0/1:32,31:63:255,0,255
-chr21	26208416	chr21:26208416:M	AATTTTATTTTTAATTTT	<3.2>	.	.	Motif=AATTTT	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:9,8:17:147,0,172	0/1:21,13:34:220,0,255
-chr21	26209215	chr21:26209215:M	TTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/1:8,11:19:144,0,89	0/1:15,15:30:194,0,194
-chr21	26215457	chr21:26215457:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,8:12:104,0,35	0/1:0,1:5:7,0,16	0/1:1,8:10:107,0,1
-chr21	26216604	chr21:26216604:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,6:24:38,0,247	0/1:7,2:11:3,0,110	1/1:0,11:12:183,24,0
-chr21	26226509	chr21:26226509:M	AAAAAAAAAAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:96,6,0	1/1:0,3:5:61,11,0	0/1:1,4:5:53,0,2
-chr21	26226711	chr21:26226711:M	AGAGAGAAAGAGAGAGAGA	<3.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:23,26:49:255,0,255	0/1:22,26:48:255,0,255	0/0:41,0:41:0,123,255
-chr21	26226759	chr21:26226759:M	AAAAAGAAAAGAAAAGAAATAAAAAAAGAAAAAAGAAAGAAAAAAGAAAA	<22>,<49>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,17:37:255,197,255,255,0,255	1/2:0,9,10:27:255,114,221,201,0,174	1/2:0,9,15:28:255,172,255,200,0,159
-chr21	26235433	chr21:26235433:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,28:44:255,0,99	0/0:34,1:36:0,88,255	0/1:16,17:35:228,0,192
-chr21	26236885	chr21:26236885:M	TGCCCATGCCCA	<1.8>	.	.	Motif=TGCCCA	GT:AD:DP:PL	1/1:0,28:31:255,78,0	1/1:0,23:25:255,64,0	1/1:0,39:40:255,108,0
-chr21	26241099	chr21:26241099:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,7:8:206,127,106,24,6,0	1/2:0,3,12:15:255,199,158,51,0,6	1/2:2,4,9:16:255,104,127,16,0,27
-chr21	26241264	chr21:26241264:M	TTTTGTTTTTTTTTTTATTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:1,13:15:218,26,0	1/1:1,16:17:255,32,0
-chr21	26242421	chr21:26242421:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,24:40:255,0,206	0/0:25,0:26:0,78,255	0/1:13,18:37:255,0,255
-chr21	26243631	chr21:26243631:M	TTTTTCTTTCTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,15:32:191,0,226	0/0:39,0:39:0,115,255	0/1:11,14:25:186,0,128
-chr21	26247353	chr21:26247353:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,27,22:49:255,255,255,255,0,255	2/2:0,2,51:53:255,255,255,156,120,0	1/2:0,29,35:64:255,255,255,255,0,255
-chr21	26249109	chr21:26249109:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,9:19:137,0,70	0/1:12,4:18:26,0,161	0/1:9,10:19:120,0,101
-chr21	26252985	chr21:26252985:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:9:36,0,53	0/0:4,1:6:0,1,61	1/1:0,3:5:40,1,0
-chr21	26256744	chr21:26256744:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:7:124,21,0	.	1/1:0,7:7:122,21,0
-chr21	26259758	chr21:26259758:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,4:16:255,42,36,165,0,141	0/2:2,1,6:9:85,67,115,0,17,8	1/2:1,6,8:16:249,99,103,92,0,67
-chr21	26262784	chr21:26262784:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:145,0,180	0/0:26,0:28:0,81,255	0/1:12,15:29:187,0,144
-chr21	26264705	chr21:26264705:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,44:45:255,114,0	1/1:0,40:40:255,118,0	1/1:2,60:62:255,146,0
-chr21	26268884	chr21:26268884:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,54:57:255,148,0	1/1:1,33:37:255,90,0	1/1:4,49:54:255,86,0
-chr21	26270944	chr21:26270944:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,49:50:255,147,0	1/1:0,45:45:255,132,0	1/1:0,40:40:255,118,0
-chr21	26279778	chr21:26279778:M	AAAAGAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:30:255,0,119	1/1:1,30:32:255,76,0	0/1:16,10:27:104,0,223
-chr21	26280552	chr21:26280552:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:14:69,0,78	1/1:1,12:15:196,24,0	0/1:9,4:15:44,0,114
-chr21	26280623	chr21:26280623:M	AAAAAAAAAAACAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,19:32:242,0,137	1/1:0,19:19:255,56,0	0/0:21,4:25:0,4,255
-chr21	26284281	chr21:26284281:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,8:21:83,0,155	0/1:3,15:20:198,0,12	0/1:12,7:20:67,0,157
-chr21	26287412	chr21:26287412:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:11:0,6,248	0/0:14,0:19:0,55,255	0/1:9,4:13:70,0,207
-chr21	26288931	chr21:26288931:M	TATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGCATGCATGTATGCATGCATGCATGTATGTATGTATGTATGTATGTATGTATGTAT	<12.8>,<15.8>,<16.8>	.	.	Motif=TATG	GT:AD:DP:PL	1/2:0,4,2,0:10:124,38,23,74,0,63,111,29,74,106	2/3:0,0,2,3:5:102,98,95,45,45,32,30,29,0,16	1/2:0,3,3,0:8:123,56,43,55,0,42,105,43,55,98
-chr21	26289027	chr21:26289027:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<14.8>,<16.8>,<17.8>	.	.	Motif=TATC	GT:AD:DP:PL	2/3:0,0,9,8:24:255,255,255,140,140,91,157,157,0,108	0/3:17,0,0,5:22:85,137,255,83,255,255,0,255,255,255	1/2:0,10,6,0:22:255,163,133,255,0,255,255,102,255,255
-chr21	26289692	chr21:26289692:M	TTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:205,24,0	1/1:0,3:6:131,18,0	1/1:0,6:9:210,25,0
-chr21	26291439	chr21:26291439:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:38:255,114,0	1/1:0,32:36:255,99,0	1/1:0,48:50:255,147,0
-chr21	26291833	chr21:26291833:M	AAAAAAAAAAACAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,63,0	1/1:0,20:23:255,65,0	1/1:1,23:25:255,45,0
-chr21	26294961	chr21:26294961:M	TTATTTTATTTTATTTATATTATATTATATTATATTATATTATATTATATTAT	<14.6>,<15.6>	.	.	Motif=TTATA	GT:AD:DP:PL	1/2:0,9,3:12:255,59,23,175,0,140	.	1/2:0,1,1:2:61,19,13,19,0,13
-chr21	26299947	chr21:26299947:M	TTTTTTTGTTTTTTGTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,2,19:23:255,255,255,63,18,0	1/2:0,3,7:10:255,119,90,51,0,22	2/2:0,0,17:17:255,255,255,51,50,0
-chr21	26311383	chr21:26311383:M	ATATATATATACATGTATATATATATATATGTGCATACATATATACATGTATATATAT	<15>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,5:15:89,0,223	0/0:27,0:27:0,81,255	0/1:7,2:9:26,0,161
-chr21	26311771	chr21:26311771:M	ATATATACACATACATATATACATATATACATATATGTATGTACGTATATATATACATTTATATAT	<10>	.	.	Motif=ATAT	GT:AD:DP:PL	0/1:3,10:13:255,0,38	0/1:5,15:20:255,0,68	1/1:0,16:16:255,48,0
-chr21	26311850	chr21:26311850:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,0,0:34:0,102,255,96,255,255	0/2:13,0,23:39:211,211,255,0,140,66	0/1:13,20,1:35:255,0,220,255,156,255
-chr21	26311874	chr21:26311874:M	TATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:9,1,7:20:54,93,240,0,71,63	0/1:9,10,0:27:115,0,32,172,82,255	1/2:1,11,7:33:194,104,142,134,0,203
-chr21	26325011	chr21:26325011:M	AAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,9,0:25:89,0,207,160,255,255	0/2:14,1,3:22:59,78,255,0,226,255	1/2:1,16,7:25:255,169,134,255,0,255
-chr21	26334783	chr21:26334783:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,24:40:255,0,172	0/0:19,2:21:0,26,255	0/1:15,13:30:159,0,194
-chr21	26334945	chr21:26334945:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<10>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:7,6:13:71,0,89	0/1:3,10:13:150,0,18
-chr21	26351915	chr21:26351915:M	AGAGAGAGAGAGAGAGAGAGTGAGAGAAAGACAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:10,13:23:255,0,202	0/0:26,0:27:0,78,255	0/1:15,14:31:255,0,255
-chr21	26356078	chr21:26356078:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,19:33:255,0,255	0/0:35,0:35:0,105,255	0/1:16,16:32:255,0,255
-chr21	26363925	chr21:26363925:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,20:23:255,48,0	1/1:3,21:24:255,18,0	1/1:0,18:19:255,55,0
-chr21	26365813	chr21:26365813:M	TTTTTTTTTTCTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,34:34:255,100,0	1/1:0,38:38:255,112,0
-chr21	26367626	chr21:26367626:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,5:21:84,0,255	1/1:0,16:17:255,51,0	0/1:13,6:22:124,0,255
-chr21	26371726	chr21:26371726:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,8,1:12:255,140,123,21,2,0,152,89,3,125	3/3:0,1,1,11:13:255,255,255,189,172,152,37,6,7,0	1/2:0,3,7,0:11:255,119,87,63,0,32,215,99,62,192
-chr21	26379272	chr21:26379272:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:35,0,34	0/1:1,5:8:72,0,4	1/1:1,7:10:126,12,0
-chr21	26385124	chr21:26385124:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:82,14,0	1/1:2,8:12:124,1,0	1/1:0,8:8:138,23,0
-chr21	26401715	chr21:26401715:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,2:25:0,35,255	0/0:19,0:20:0,58,255	0/1:14,9:23:93,0,182
-chr21	26409615	chr21:26409615:M	ACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,9:25:160,0,255	0/1:12,15:32:255,0,255	0/1:25,9:40:141,0,255
-chr21	26412725	chr21:26412725:M	ACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:9,0,6:17:117,102,234,0,171,228	1/2:0,9,5:14:249,83,43,125,0,110	0/0:13,0,0:14:0,41,236,42,255,255
-chr21	26417907	chr21:26417907:M	TAAAATAAAATAA	<2.4>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:23,20:43:255,0,255	0/1:15,18:33:255,0,225	0/1:25,19:44:255,0,255
-chr21	26418523	chr21:26418523:M	TGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/1:31,18:52:255,0,255	0/1:20,21:43:255,0,255	0/1:15,32:48:255,0,255
-chr21	26426663	chr21:26426663:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<17.5>,<18.5>,<20.5>	.	.	Motif=AG	GT:AD:DP:PL	0/3:8,0,0,5:14:111,140,255,137,255,255,0,219,219,198	1/3:0,8,1,4:14:255,116,91,222,88,193,234,0,116,219	0/2:3,1,7,0:14:191,95,174,0,77,80,195,176,82,255
-chr21	26428225	chr21:26428225:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:28:255,0,255	1/1:0,25:29:255,80,0	0/1:11,11:24:231,0,243
-chr21	26437131	chr21:26437131:M	GTGTGTGTGTGTGTGTGTGTATGTGTTTGTGT	<24>,<25>	.	.	Motif=GT	GT:AD:DP:PL	0/2:15,1,15:31:255,248,255,0,255,255	1/2:0,12,6:19:255,102,50,203,0,153	0/1:19,6,1:27:106,0,255,87,255,255
-chr21	26443409	chr21:26443409:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,3:30:0,34,255	0/1:10,12:24:137,0,122	0/0:35,0:36:0,105,255
-chr21	26451872	chr21:26451872:M	CACACACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,12:24:147,0,139	1/1:2,18:21:255,27,0	0/0:27,0:27:0,79,255
-chr21	26463243	chr21:26463243:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:25:0,63,255	0/1:11,6:21:106,0,249	0/1:9,4:17:87,0,191
-chr21	26474037	chr21:26474037:M	TTTTTGTTTTCGTTTTTTTTTTTTTTTTG	<4.7>	.	.	Motif=TTTTTG	GT:AD:DP:PL	1/1:0,16:17:255,50,0	1/1:1,23:25:255,56,0	1/1:0,16:17:255,50,0
-chr21	26476577	chr21:26476577:M	CTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAATCTTCTATTATCTATCTATCTATCTA	<17.2>,<21.2>	.	.	Motif=CTAT	GT:AD:DP:PL	0/0:7,0,0:8:0,24,212,23,161,143	0/1:2,5,0:7:123,0,37,129,35,159	2/2:0,0,4:4:74,85,115,12,12,0
-chr21	26480555	chr21:26480555:M	TTTTTCTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:33:255,79,0	1/1:2,20:25:255,37,0	1/1:1,31:34:255,77,0
-chr21	26483413	chr21:26483413:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,22:31:255,0,123	1/1:0,45:46:255,138,0	0/1:12,20:37:255,0,218
-chr21	26486620	chr21:26486620:M	TTTTTTTTTCTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:149,0,226	0/0:42,0:42:0,124,255	0/1:20,13:33:147,0,255
-chr21	26487917	chr21:26487917:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:40:255,113,0	1/1:0,47:48:255,143,0	1/1:0,39:42:255,122,0
-chr21	26487960	chr21:26487960:M	TTTTTTTATTTTGCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30:31:255,93,0	1/1:0,46:47:255,141,0	1/1:0,44:44:255,132,0
-chr21	26488241	chr21:26488241:M	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<12.2>,<13.2>	.	.	Motif=CTTC	GT:AD:DP:PL	0/1:8,7,0:15:89,0,108,113,150,255	1/2:0,16,15:31:255,255,178,241,0,196	0/1:11,8,0:19:92,0,148,125,201,255
-chr21	26492717	chr21:26492717:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,40:42:255,86,0	1/1:1,28:29:255,68,0	1/1:1,44:46:255,117,0
-chr21	26502303	chr21:26502303:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,10,13:24:255,202,169,190,0,125	1/1:0,17,2:22:255,57,0,255,27,255	1/2:0,8,14:24:255,212,185,150,0,87
-chr21	26504225	chr21:26504225:M	TATTTATTTATTTATTTATTTATTT	<8.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:18,17:35:255,0,255	0/0:35,0:35:0,105,255	0/1:16,12:28:255,0,255
-chr21	26511981	chr21:26511981:M	CACACATACACACACACACACACACACACACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,11:33:222,0,255	0/1:8,15:25:255,0,161	0/0:26,0:28:0,83,255
-chr21	26512196	chr21:26512196:M	TTTTTTTATTTATTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/1:18,10:28:97,0,242	0/0:36,0:36:0,106,255
-chr21	26514067	chr21:26514067:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,34:34:255,100,0	0/1:19,21:40:255,0,227
-chr21	26517115	chr21:26517115:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,5:5:138,15,0	0/0:0,0:1:0,3,13
-chr21	26520114	chr21:26520114:M	ATATATATATATATATATATATATATAT	<9>,<12>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,17,16:34:255,255,255,255,0,255	1/1:0,12,0:13:255,39,0,255,39,255	0/2:7,0,8:17:186,212,255,0,188,159
-chr21	26542278	chr21:26542278:M	TGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<25.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,10,10:27:255,249,220,138,0,246	0/1:0,3,0:7:30,0,13,46,25,104	2/2:0,1,12:16:255,255,255,34,10,0
-chr21	26544947	chr21:26544947:M	AACAAAAACAAAAACAAAAA	<1.2>	.	.	Motif=AACAAA	GT:AD:DP:PL	1/1:0,4:4:109,12,0	1/1:0,4:4:110,12,0	1/1:0,2:2:51,6,0
-chr21	26547780	chr21:26547780:M	TTTTTTTTTTTTTTCTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,24,11:35:255,176,103,255,0,255	0/2:13,1,18:33:233,251,255,0,218,145	1/2:0,15,10:27:255,155,105,255,0,218
-chr21	26561314	chr21:26561314:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,12,20:34:255,255,255,210,0,255	0/2:20,1,17:38:187,255,255,0,255,247	0/1:18,19,1:39:241,0,221,255,255,255
-chr21	26567009	chr21:26567009:M	AAAAAAAAAAAAAAAAAAAA	<13>,<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,20,0,6:29:255,154,113,255,124,255,255,0,255,255	2/3:0,0,5,6:12:255,255,255,101,101,69,86,85,0,54	1/2:0,14,3,0:18:255,90,47,255,0,255,255,60,255,255
-chr21	26571518	chr21:26571518:M	AAACAAACAAACAAACAAACAAA	<4.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:10,15:25:217,0,120	0/0:46,0:46:0,135,255	0/1:17,18:35:236,0,217
-chr21	26581993	chr21:26581993:M	TTTACTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<9>,<12>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,15,0:28:255,0,255,255,248,255	1/2:0,11,4:15:255,72,78,255,0,255	0/0:19,0,0:19:0,57,255,56,255,255
-chr21	26583559	chr21:26583559:M	ACACACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/1:17,15:32:176,0,212	0/1:21,30:51:255,0,240
-chr21	26583616	chr21:26583616:M	TATATATATATATAATGTGTATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	0/1:14,12:26:157,0,190	0/1:19,7:26:51,0,255	0/0:21,0:21:0,62,255
-chr21	26584093	chr21:26584093:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:22:0,46,255	0/1:16,15:32:172,0,200	0/1:17,20:38:255,0,209
-chr21	26596831	chr21:26596831:M	AAATAAATAAATAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:24,20:44:255,0,255	0/1:12,17:29:255,0,239	0/0:41,0:41:0,123,255
-chr21	26599354	chr21:26599354:M	GTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,6,6:13:255,255,255,163,162,138,159,104,0,138	1/3:1,14,1,5:21:255,124,94,255,118,255,221,0,221,255	1/2:1,14,9,0:24:255,133,81,179,0,178,255,151,245,255
-chr21	26618920	chr21:26618920:M	AAAAAAAAAAAAA	<14>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20,0:37:255,0,190,255,255,255	0/2:11,0,8:19:183,216,255,0,189,255	1/2:1,13,16:32:255,255,255,212,0,255
-chr21	26620910	chr21:26620910:M	GTGTGTGTGCATGCGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:22,0:25:0,63,255	0/1:15,14:33:117,0,132	0/1:15,16:38:145,0,130
-chr21	26626951	chr21:26626951:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:0,0,0	1/1:0,1:4:62,9,0	1/1:0,3:5:123,15,0
-chr21	26628410	chr21:26628410:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,23,15:41:255,242,255,255,0,255	1/2:3,17,18:38:255,255,255,249,0,255	2/2:0,0,29:33:255,255,255,96,98,0
-chr21	26628921	chr21:26628921:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,8,14:24:255,255,255,220,0,178	2/2:0,0,16:16:255,255,255,48,48,0	1/2:0,7,8:18:255,203,178,214,0,190
-chr21	26629167	chr21:26629167:M	TTTTTTTTTTT	<10>,<12>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,23,11:35:255,193,253,255,0,255	1/1:2,31,0:33:255,61,0,255,93,255	1/2:0,15,16:31:255,255,255,255,0,255
-chr21	26630679	chr21:26630679:M	TGTGTGTGTATGTGTGTGTGTGTGTGT	<11.5>,<12.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,2,14:21:209,164,158,45,19,0	1/1:0,13,0:21:255,48,0,244,44,203	1/2:0,9,18:29:255,187,154,139,0,60
-chr21	26632239	chr21:26632239:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:0,0,0	1/1:0,3:4:108,12,0	1/1:0,2:3:73,6,0
-chr21	26638122	chr21:26638122:M	TATATATATATATATATATACACATATATATATATATATGTATATATAT	<8.5>,<18.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:2,0,5:8:123,131,191,0,60,45	1/2:0,14,6:20:255,156,114,255,0,255	0/1:2,11,0:15:255,0,34,255,67,255
-chr21	26638345	chr21:26638345:M	TATATATATATATATATA	<18>	.	.	Motif=TA	GT:AD:DP:PL	0/1:9,3:12:39,0,194	1/1:0,1:1:25,3,0	0/0:15,0:16:0,48,255
-chr21	26639690	chr21:26639690:M	GTGTGTGGGTGTCTATGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<25>,<31>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,3,0,3:9:103,70,61,111,70,141,41,0,71,62	2/3:0,0,2,2:5:100,100,100,49,49,43,51,51,0,45	1/2:0,4,4,0:8:144,101,89,54,0,83,155,101,95,196
-chr21	26642320	chr21:26642320:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/1:19,25:44:255,0,238	0/1:25,18:44:198,0,255	0/0:44,0:44:0,130,255
-chr21	26645859	chr21:26645859:M	ATAAAAACAAAAAAGAAAATAAAAATA	<3.7>	.	.	Motif=ATAAAA	GT:AD:DP:PL	0/1:16,24:40:255,0,255	0/1:15,15:30:255,0,255	0/0:36,0:36:0,108,255
-chr21	26646887	chr21:26646887:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,20,23:47:255,255,255,255,0,255	1/2:0,14,21:36:255,255,255,255,0,255	2/2:1,0,43:46:255,255,255,117,132,0
-chr21	26650125	chr21:26650125:M	GAAAAAGAAAAGGAAAAAGA	<3.5>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:19,24:43:255,0,255	0/1:28,19:47:255,0,255	0/0:37,0:37:0,110,255
-chr21	26651820	chr21:26651820:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,21:41:255,0,255	0/1:25,19:46:255,0,255	0/0:40,0:42:0,123,255
-chr21	26653445	chr21:26653445:M	TTTTTTTTTTTTTTTTTT	<13>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,0,11:19:166,214,255,0,108,53	1/2:0,21,5:30:255,93,76,255,0,255	0/2:6,0,9:19:136,182,255,0,113,61
-chr21	26658481	chr21:26658481:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:15,6:22:113,0,255	0/0:32,0:32:0,96,255
-chr21	26665544	chr21:26665544:M	CTTTCTTTCTTTCTTT	<3>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:7,28:35:255,0,24	0/0:41,0:41:0,121,255
-chr21	26679776	chr21:26679776:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:20:0,59,255	1/1:2,18:20:255,24,0	0/0:37,6:44:0,21,255
-chr21	26681384	chr21:26681384:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,19:48:212,0,255	1/1:3,28:32:255,41,0	0/0:51,1:56:0,143,255
-chr21	26697932	chr21:26697932:M	AAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,19:22:255,255,255,0,60,4	0/2:1,0,17:22:255,255,255,0,55,1	1/1:1,20,1:22:255,35,0,255,44,255
-chr21	26698764	chr21:26698764:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:28:109,0,221	0/1:15,15:32:180,0,180	0/0:37,0:38:0,112,255
-chr21	26700305	chr21:26700305:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,26,18:44:255,255,218,255,0,255	1/2:0,27,26:53:255,255,255,255,0,255	1/2:0,37,24:61:255,255,255,255,0,255
-chr21	26706669	chr21:26706669:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<11.2>,<12.2>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:16,8,0:24:84,0,240,132,255,255	0/2:14,0,15:30:255,255,255,0,255,255	1/1:0,22,0:22:255,65,0,255,65,255
-chr21	26707896	chr21:26707896:M	GATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<11>	.	.	Motif=GATA	GT:AD:DP:PL	0/0:12,0:19:0,42,255	0/1:10,14:27:255,0,190	0/1:13,17:38:255,0,255
-chr21	26708936	chr21:26708936:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	0/1:8,13:21:182,0,87	1/1:1,33:34:255,83,0	0/1:9,12:21:159,0,103
-chr21	26714260	chr21:26714260:M	TTTTGTTTTGTTTTGTTTTGTTCTGTTT	<6.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:29,0:29:0,85,255	0/1:14,13:27:164,0,183
-chr21	26717745	chr21:26717745:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGT	<25.5>,<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,3,0,7:10:194,126,201,179,204,244,91,0,54,74	2/3:1,0,6,2:9:96,105,162,19,62,39,88,105,0,166	0/1:11,8,0,0:19:193,0,255,139,191,255,232,192,255,255
-chr21	26719085	chr21:26719085:M	AAAAAAAAAAAAAAAGAAAAAAAGAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:16:194,0,146	1/1:0,18:19:255,54,0	0/1:3,11:14:252,0,44
-chr21	26721320	chr21:26721320:M	AAAAAAAAAAAGAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,17,0:31:230,0,173,255,224,255	1/2:0,17,17:34:255,255,255,255,0,255	0/1:18,26,0:45:255,0,200,255,255,255
-chr21	26721683	chr21:26721683:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:21:255,63,0,255,60,255	1/2:0,6,4:11:255,106,85,166,0,147	1/2:0,12,1:17:255,27,32,255,0,255
-chr21	26722340	chr21:26722340:M	TTTCTTTTTTTTTCTTTT	<3.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,25:25:255,75,0	0/1:24,19:43:255,0,255	0/1:22,23:45:255,0,255
-chr21	26724731	chr21:26724731:M	TGTTTTTTTTTTTTTTTTGTTTTTG	<4>	.	.	Motif=TGTTTT	GT:AD:DP:PL	0/0:9,1:10:0,10,152	0/1:4,9:15:138,0,36	0/0:13,0:13:0,38,250
-chr21	26725779	chr21:26725779:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:5:3,0,55	0/1:3,4:7:46,0,30	0/1:3,1:4:6,0,40
-chr21	26727602	chr21:26727602:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,85,255	0/1:14,11:28:111,0,161	0/0:37,0:39:0,111,255
-chr21	26734714	chr21:26734714:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:33:219,0,180	1/1:4,35:40:255,47,0	0/1:15,13:29:160,0,187
-chr21	26742280	chr21:26742280:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:146,15,0	0/0:0,0:4:0,0,0	1/1:0,10:11:255,30,0
-chr21	26742481	chr21:26742481:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,10:18:128,0,85	1/1:1,4:9:73,4,0	0/1:3,6:12:95,0,21
-chr21	26746256	chr21:26746256:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,2,36:40:255,255,255,96,70,0	1/2:2,15,21:38:255,255,255,229,0,157	1/2:0,20,18:42:255,255,213,255,0,255
-chr21	26746899	chr21:26746899:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:25:199,0,255	0/1:10,9:20:189,0,215	0/0:23,0:27:0,74,255
-chr21	26762626	chr21:26762626:M	AAAAAAAAAAAAAAAAAAAA	<21>,<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,4,3:7:193,151,138,53,52,32,70,59,0,50	1/2:0,3,1,0:5:68,17,5,42,0,39,67,14,50,94	1/2:0,2,3,0:5:109,51,37,29,0,20,85,43,34,94
-chr21	26764388	chr21:26764388:M	CACACACACACACACACACACACACACACACACACAC	<14.5>,<15.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,65,255	1/2:0,10,8:19:255,137,82,179,0,127	1/2:0,12,8:20:255,141,83,210,0,154
-chr21	26765106	chr21:26765106:M	TGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<19>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,12,0:24:154,0,146,190,210,255	1/2:0,5,6:11:227,104,74,74,0,56	0/2:16,1,10:31:218,163,255,0,255,255
-chr21	26766282	chr21:26766282:M	ACACACACACACACACACACACACACACACACACACATACCCACACACATACACACACACA	<26.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,4,4:8:166,69,96,108,0,96	1/1:0,5,0:7:161,17,0,154,9,151	0/2:1,0,3:4:39,51,109,0,17,5
-chr21	26767776	chr21:26767776:M	ACACACACACACACACACACACACACACACACACACACACAC	<17>,<18>,<22>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,12,0:26:255,215,139,249,0,175,255,215,249,255	0/2:8,0,11,0:19:255,186,255,0,222,190,255,255,135,255	1/3:1,13,1,6:22:255,86,136,255,150,255,255,0,200,255
-chr21	26768757	chr21:26768757:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,1:33:0,78,255	0/1:12,9:21:105,0,156	0/1:13,13:26:172,0,168
-chr21	26770320	chr21:26770320:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,33:34:255,100,0	1/1:0,35:36:255,106,0
-chr21	26770853	chr21:26770853:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,2:41:0,81,255	0/1:19,25:45:255,0,201	0/0:42,2:46:0,99,255
-chr21	26772465	chr21:26772465:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:8:31,0,66	0/0:10,2:12:0,1,136	0/1:3,9:14:134,0,15
-chr21	26775179	chr21:26775179:M	TTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:26:255,77,0	0/1:14,8:27:203,0,255	0/1:25,10:38:179,0,255
-chr21	26776964	chr21:26776964:M	ACACACACACACACACACACACACACACACACA	<19.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,13,0,0:30:255,0,255,255,255,255,255,255,255,255	0/3:10,0,2,10:23:255,255,255,82,255,255,0,252,230,229	1/2:0,9,8,2:24:255,212,153,224,0,174,255,76,205,255
-chr21	26786802	chr21:26786802:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:52,2:55:0,126,255	0/1:18,15:33:178,0,233
-chr21	26813982	chr21:26813982:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,2:37:0,72,255	0/1:16,22:41:255,0,180	0/1:21,19:40:225,0,255
-chr21	26814938	chr21:26814938:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,11:20:133,0,89	1/1:1,14:17:215,27,0	0/0:12,1:16:0,21,188
-chr21	26815095	chr21:26815095:M	AAACAAACAAACAAACAAAACAAAAAAC	<7.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:17,11:28:220,0,255	1/1:0,24:24:255,72,0	0/1:15,12:27:251,0,255
-chr21	26816216	chr21:26816216:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATTTGTGTGTGTGTGTGTATGTGTGTGTCTGTGT	<36.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,5:6:59,3,0	1/1:0,3:6:43,9,0	1/1:0,2:5:40,8,0
-chr21	26816399	chr21:26816399:M	ATATATATATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:10,15:29:255,0,202	0/1:21,13:37:216,0,255	0/0:34,1:35:0,80,255
-chr21	26816417	chr21:26816417:M	ACACACACACACACACACACACACACACACACA	<13.5>,<14.5>,<18.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:2,1,7,3:15:159,93,160,23,84,67,127,84,0,233	1/2:0,12,4,0:16:255,49,2,141,0,93,255,50,141,255	2/3:3,4,4,4:15:166,24,117,25,65,81,115,8,0,199
-chr21	26824985	chr21:26824985:M	GAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAGAAA	<5.8>	.	.	Motif=GAAAAA	GT:AD:DP:PL	0/1:1,2:5:39,0,20	0/1:1,4:5:75,0,10	0/0:2,0:2:0,6,47
-chr21	26829295	chr21:26829295:M	GATAGATAGAGAGATCTAGATAGATCTAGATAGATAGATAGATAGATAGATAGA	<12.5>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:12,16:28:227,0,147	1/1:0,11:11:200,32,0	0/1:9,10:19:132,0,112
-chr21	26849665	chr21:26849665:M	TTTTTTTTTTTTTTTT	<17>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,4:14:181,106,83,93,0,157	1/2:0,5,6:13:220,166,150,69,0,120	0/1:10,1,0:21:25,0,76,23,80,255
-chr21	26856469	chr21:26856469:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,21:41:255,0,249	1/1:0,30:33:255,86,0	0/1:16,15:32:178,0,206
-chr21	26863306	chr21:26863306:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,4:5:56,69,111,0,15,3	1/2:0,9,2:14:168,32,16,164,0,231	0/2:2,0,9:12:131,161,255,0,30,0
-chr21	26864743	chr21:26864743:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,18:27:249,0,75	0/1:11,11:25:141,0,120	0/1:5,11:16:149,0,42
-chr21	26868351	chr21:26868351:M	GTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,16,7:25:255,112,144,255,0,255	1/2:0,24,6:31:255,106,86,255,0,255	1/2:0,13,12:27:255,217,255,255,0,255
-chr21	26876593	chr21:26876593:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<7.5>,<20.5>,<21.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,0,4,0:24:12,72,255,0,255,225,35,255,255,255	1/2:1,8,9,0:24:255,138,252,190,0,178,255,95,206,255	0/3:9,1,0,5:20:84,100,255,44,185,171,0,210,161,206
-chr21	26876629	chr21:26876629:M	GCGCGCGTGCGCGCGCGCGCGC	<7>	.	.	Motif=GC	GT:AD:DP:PL	1/1:0,11:12:255,36,0	1/1:0,22:25:255,75,0	1/1:1,14:18:255,28,0
-chr21	26879466	chr21:26879466:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:4:0,12,70	1/1:0,1:3:38,8,0	0/1:1,3:4:40,0,5
-chr21	26882714	chr21:26882714:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:28:255,0,235	0/0:20,1:26:0,48,255	0/1:8,12:28:255,0,166
-chr21	26883167	chr21:26883167:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,12,10:26:255,177,226,209,0,255	0/1:18,14,1:33:149,0,230,224,246,255	1/2:2,18,8:29:255,110,148,255,0,255
-chr21	26885723	chr21:26885723:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:32:184,0,217	0/1:19,24:45:255,0,226	0/1:12,16:28:214,0,137
-chr21	26904803	chr21:26904803:M	AAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:13:67,0,163	0/1:7,4:13:67,0,175	0/1:6,3:10:62,0,135
-chr21	26911752	chr21:26911752:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:5,14:21:255,0,79	0/1:8,20:33:255,0,159
-chr21	26919217	chr21:26919217:M	TTTTTTATTTGTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:178,0,206	0/0:27,3:30:0,37,255	0/1:13,17:32:218,0,146
-chr21	26926668	chr21:26926668:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:21:255,60,0	0/1:8,6:16:78,0,89	0/1:8,16:26:221,0,64
-chr21	26941373	chr21:26941373:M	AACAGAAACAGA	<2.3>	.	.	Motif=AACAGA	GT:AD:DP:PL	1/1:0,37:37:255,111,0	0/1:16,34:50:255,0,255	0/1:25,23:48:255,0,255
-chr21	26945151	chr21:26945151:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,36:40:255,63,0	0/1:19,20:39:235,0,216	0/1:19,22:41:255,0,220
-chr21	26949137	chr21:26949137:M	ATATATATATATATATATCACACATATATCCATATATATATATCACACATATATATATATAT	<32>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,11:15:142,18,0	0/1:9,8:19:69,0,64	0/1:12,5:18:25,0,107
-chr21	26949200	chr21:26949200:M	GAGAGAGAGAGAGAGAGAGAGAGAG	<13.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,24:25:255,71,0	0/1:7,9:17:102,0,79	0/1:18,11:30:103,0,234
-chr21	26957430	chr21:26957430:M	ATAGATAGATGGATAGATGATAGATAGATAGATAGATAGATAGATAGATA	<11.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,20:20:255,59,0	0/1:8,8:16:98,0,97	0/1:10,4:14:34,0,146
-chr21	26980002	chr21:26980002:M	AAAAAAAAAAAAATAATAAAAAATAAAAAAAA	<34>,<35>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,11:22:255,201,139,199,0,138	1/2:1,8,9:19:255,130,105,114,0,98	1/2:0,3,15:19:255,255,215,54,0,9
-chr21	26986375	chr21:26986375:M	AAAACAAAACAAAACA	<4.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,27:30:255,74,0	0/1:14,17:32:255,0,255	0/1:19,14:36:255,0,255
-chr21	26987399	chr21:26987399:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,9:14:213,112,127,51,0,28	1/1:0,4,0:5:114,12,0,77,12,66	1/2:1,5,3:10:163,26,33,77,0,68
-chr21	26997705	chr21:26997705:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,39:39:255,115,0	1/1:0,40:40:255,118,0
-chr21	27012585	chr21:27012585:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7,1:9:111,9,0,90,9,110	1/2:0,2,3:6:108,56,41,27,0,15	1/2:1,2,2:5:56,16,18,11,0,30
-chr21	27015316	chr21:27015316:M	TTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:8,8:16:108,0,108	0/1:16,14:30:166,0,203	0/1:19,7:27:53,0,255
-chr21	27021023	chr21:27021023:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:9,11:28:254,0,191	0/1:16,12:28:247,0,255	0/1:16,12:32:255,0,255
-chr21	27029599	chr21:27029599:M	GTGTGTATGTGTGTGTGTGTGTGTGTG	<12.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,21:41:255,0,236	0/1:11,10:21:115,0,133	0/1:21,17:40:209,0,255
-chr21	27031040	chr21:27031040:M	CATTCATTCATTCATTC	<8.2>,<9.2>	.	.	Motif=CATT	GT:AD:DP:PL	1/2:0,20,15:35:255,255,188,255,0,255	1/2:0,16,17:33:255,255,213,255,0,195	1/1:0,29,0:29:255,87,0,255,86,255
-chr21	27032693	chr21:27032693:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:24:112,0,138	0/1:6,7:16:103,0,56	0/1:7,9:18:114,0,80
-chr21	27038060	chr21:27038060:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/0:30,1:31:0,73,255	0/1:18,13:32:150,0,229
-chr21	27038723	chr21:27038723:M	ATATATATATTATATATATATAT	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:18,16:34:214,0,247	0/1:12,7:19:73,0,162	0/1:22,8:30:64,0,255
-chr21	27041912	chr21:27041912:M	TTTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,0,10:23:121,184,255,0,220,168	0/0:32,0,0:34:0,96,255,99,255,255	0/1:18,19,0:38:255,0,255,255,255,255
-chr21	27042351	chr21:27042351:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,47,255	0/1:17,5:24:25,0,230	0/1:3,10:14:145,0,12
-chr21	27045046	chr21:27045046:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:26:0,75,255	0/1:14,4:22:60,0,255	0/1:5,14:21:255,0,76
-chr21	27046453	chr21:27046453:M	ACACACACACACACACACACACACACACACACACACATACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:10,0:12:0,33,255	0/1:13,15:29:255,0,255
-chr21	27048700	chr21:27048700:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,1,1:43:0,98,255,105,255,255	0/2:20,2,21:44:255,255,255,0,255,252	0/1:17,23,0:40:255,0,197,255,255,255
-chr21	27052291	chr21:27052291:M	TATATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:25,0:26:0,76,255	0/1:17,14:31:170,0,226
-chr21	27059475	chr21:27059475:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/0:26,0:36:0,99,255	0/1:23,12:39:221,0,255
-chr21	27059489	chr21:27059489:M	TCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:21,11:36:156,0,255	0/1:28,8:39:79,0,255
-chr21	27061705	chr21:27061705:M	AAATAAATAAATAAATAAATAAATAAATAAA	<8.8>,<9.8>,<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,10,11,0:21:255,213,154,167,0,134,255,213,194,255	1/3:0,10,0,4:15:255,121,91,255,109,255,181,0,179,255	2/2:0,0,14,0:16:255,255,255,42,41,0,255,255,33,255
-chr21	27068129	chr21:27068129:M	CTAAAACTAAAA	<2.3>	.	.	Motif=CTAAAA	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:19,17:36:255,0,255	0/1:20,18:38:255,0,255
-chr21	27069922	chr21:27069922:M	AAGAGAAAGAGAAGGAGAA	<2.7>	.	.	Motif=AAGAGA	GT:AD:DP:PL	0/0:36,0:36:0,108,255	0/0:37,0:37:0,111,255	0/1:15,20:35:255,0,255
-chr21	27070430	chr21:27070430:M	AAAAAAAAAAAAAGAAAAGAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1,0:44:0,110,255,128,255,255	0/1:21,14,0:37:135,0,255,204,255,255	0/2:16,2,9:28:190,136,255,0,251,255
-chr21	27070466	chr21:27070466:M	AAAAAAAAAATAAGAAAAAAATAAAAAAATAAAAAATAAAAA	<43>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/1:9,10:20:121,0,108	0/0:25,0:25:0,74,255
-chr21	27070523	chr21:27070523:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,1:41:0,102,255	0/1:19,12:34:125,0,255	0/0:46,2:51:0,113,255
-chr21	27072946	chr21:27072946:M	TTTTTTTTTCTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:36,1:37:0,91,255	0/1:12,17:30:232,0,131
-chr21	27079287	chr21:27079287:M	TCTCGCTCTCTCTCCCTCTCTCTCTTTCTCTGTCTCTC	<20>	.	.	Motif=TC	GT:AD:DP:PL	0/0:15,2:17:0,22,170	0/1:10,12:22:92,0,66	0/0:24,4:28:0,26,255
-chr21	27084962	chr21:27084962:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:11,7:18:67,0,134	0/1:6,6:12:70,0,69
-chr21	27085793	chr21:27085793:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/1:17,13:31:147,0,208	0/0:30,1:32:0,75,255
-chr21	27086775	chr21:27086775:M	AAAAAACAAAACAAACAAACAAACAAACAAAAAAAAAA	<33>,<37>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,12:21:165,223,255,0,167,108	1/2:0,7,14:21:255,245,255,177,0,136	0/2:17,0,16:34:194,255,255,0,255,223
-chr21	27103259	chr21:27103259:M	TATATATATATATATATATATATATAT	<10.5>,<12.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	2/2:2,0,33,0:37:255,255,255,73,105,0,255,255,110,255	1/2:0,12,8,0:21:255,131,169,255,0,255,255,214,255,255	2/3:1,0,9,6:18:255,255,255,145,175,144,143,252,0,249
-chr21	27107708	chr21:27107708:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,39:40:255,99,0	0/1:21,17:38:191,0,255	0/1:14,23:38:255,0,147
-chr21	27116215	chr21:27116215:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:151,26,0	1/1:0,3:4:52,9,0	0/1:4,1:5:3,0,55
-chr21	27134124	chr21:27134124:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<17.5>,<18.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:20,0,0:22:0,63,255,66,255,255	0/1:19,19,0:39:255,0,255,255,255,255	0/2:17,1,15:34:255,245,255,0,255,255
-chr21	27136797	chr21:27136797:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/0:26,0:27:0,79,255	0/1:12,17:29:221,0,130
-chr21	27139200	chr21:27139200:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:30,0:30:0,90,255	0/1:18,8:26:146,0,255	0/0:27,0:28:0,84,255
-chr21	27143123	chr21:27143123:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:36:0,87,255	0/1:19,15:35:168,0,227	0/1:14,10:25:115,0,178
-chr21	27148034	chr21:27148034:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<14.5>,<22>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,10,0:11:255,33,0,255,33,255	1/2:0,19,10:32:255,255,229,255,0,255	1/2:0,14,0:18:255,47,5,255,0,255
-chr21	27149732	chr21:27149732:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,47,0:47:255,138,0,255,141,255	1/2:2,21,22:45:255,255,255,255,0,255	0/1:16,26,2:46:255,0,161,255,195,255
-chr21	27151654	chr21:27151654:M	ACACACACACACACACATACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,26:26:255,77,0	0/1:19,21:40:255,0,226	0/1:15,30:45:255,0,148
-chr21	27153416	chr21:27153416:M	AGAGAGAGAGAGAGAGAGATAGAG	<13>,<16>	.	.	Motif=AG	GT:AD:DP:PL	2/2:0,0,33:36:255,255,255,107,107,0	1/2:0,12,5:17:255,129,93,212,0,255	0/2:14,0,8:23:181,222,255,0,255,255
-chr21	27155237	chr21:27155237:M	AAAACCAAACCAAAACAAACAAGAAAGAACAAAACAA	<8.2>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,24:24:255,72,0	0/1:7,12:19:249,0,125
-chr21	27158953	chr21:27158953:M	AAAAAAAAAAAAAGAAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:25:0,63,255	0/0:15,0:17:0,47,255	0/1:7,12:21:255,0,113
-chr21	27159918	chr21:27159918:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:37:0,100,255	0/1:12,11:25:218,0,255	0/0:33,0:34:0,101,255
-chr21	27162693	chr21:27162693:M	TTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:34:0,98,255	0/1:14,5:19:87,0,255	0/0:46,0:53:0,156,255
-chr21	27167102	chr21:27167102:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,20,112	0/1:5,6:13:80,0,45	0/0:8,1:9:0,9,118
-chr21	27167875	chr21:27167875:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:45:0,114,255	0/1:23,22:47:229,0,255	0/1:21,29:50:255,0,211
-chr21	27170090	chr21:27170090:M	GTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTG	<17.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:31,0,0:31:0,93,255,92,255,255	0/1:12,15,0:27:255,0,255,255,210,255	0/2:18,0,24:42:255,255,255,0,255,210
-chr21	27171002	chr21:27171002:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:5:6,0,34	0/1:1,3:5:47,0,2	0/0:1,0:1:0,3,17
-chr21	27172720	chr21:27172720:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4,2:10:39,0,61,34,23,122	0/2:2,0,2:6:38,51,97,0,27,16	0/2:3,0,5:8:60,82,167,0,42,27
-chr21	27174600	chr21:27174600:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:21:0,54,255	0/0:15,0:15:0,45,255	0/1:15,7:24:130,0,255
-chr21	27177682	chr21:27177682:M	TTACTTACTTAC	<2>	.	.	Motif=TTAC	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:24,28:52:255,0,255	0/1:20,29:49:255,0,232
-chr21	27179550	chr21:27179550:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,1:8:3,0,159	0/0:15,0:15:0,45,255	0/1:7,7:17:151,0,146
-chr21	27182356	chr21:27182356:M	ATCTATCTATCTATCTATCTATCTATCTAT	<5.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:4,6:13:137,0,69	0/0:26,0:26:0,78,255
-chr21	27186560	chr21:27186560:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1,1:4:18,0,59,8,17,34	0/1:3,4,0:11:121,0,66,102,49,141	0/2:2,0,6:8:79,101,200,0,34,11
-chr21	27186863	chr21:27186863:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGT	<26.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,7:7:118,137,202,20,21,0	1/2:0,6,1:10:110,15,1,114,0,168	1/2:2,4,4:11:76,37,89,38,0,90
-chr21	27188142	chr21:27188142:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/1:13,7:21:58,0,171	0/0:32,2:38:0,47,255
-chr21	27193593	chr21:27193593:M	GAGAGAGAGAGAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,28:29:255,87,0	1/1:0,28:28:255,84,0
-chr21	27194368	chr21:27194368:M	AAAAAAAAAAAAAAGCAAAAAACAAAAGAACAAAAAACAAAACAAACAAAAAAAA	<60>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:72,9,0	1/1:0,2:4:79,11,0	1/1:0,4:5:128,15,0
-chr21	27198459	chr21:27198459:M	TTCTTTCTTTATTCTTTTTTTCTT	<6.8>	.	.	Motif=TTCT	GT:AD:DP:PL	1/1:0,6:6:252,18,0	1/1:0,11:11:255,33,0	1/1:0,13:13:255,39,0
-chr21	27198602	chr21:27198602:M	ATTATTATTATTATTATT	<6.3>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:27,15:44:0,6,59	0/1:22,18:46:6,0,43	0/0:41,0:45:0,76,202
-chr21	27198618	chr21:27198618:M	TTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,14:42:255,0,255	0/1:19,14:36:255,0,255	0/0:39,0:41:0,118,255
-chr21	27223734	chr21:27223734:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:47:0,119,255	0/0:33,0:35:0,102,255	0/1:19,16:37:185,0,238
-chr21	27228563	chr21:27228563:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,33:34:255,99,0	1/1:0,36:36:255,106,0
-chr21	27233281	chr21:27233281:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<17>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/0:28,0:29:0,85,255	0/1:13,15:28:189,0,152
-chr21	27238205	chr21:27238205:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:32,0:33:0,98,255	0/0:46,0:46:0,135,255	0/1:19,25:44:255,0,227
-chr21	27249823	chr21:27249823:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:10,12:23:141,0,108	0/0:20,0:22:0,64,255
-chr21	27259481	chr21:27259481:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:34:130,0,255	0/0:16,0:18:0,52,255	0/0:24,0:25:0,73,255
-chr21	27260895	chr21:27260895:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<11.8>,<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,10,15:25:255,255,212,162,0,117	1/1:0,7,0:7:126,21,0,126,21,126	2/2:0,0,18:18:255,255,255,54,53,0
-chr21	27277660	chr21:27277660:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,19:23:255,58,0	1/1:0,24:28:255,82,0
-chr21	27278342	chr21:27278342:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,30:32:255,57,0	1/1:1,25:26:255,59,0	1/1:1,25:26:255,58,0
-chr21	27279983	chr21:27279983:M	TTTTTAATTTTTATTTTATTATTATTATTATTATTATTATTATTATTATTATTATT	<6.3>,<6.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	1/1:0,26,0:28:255,78,0,255,70,255	1/1:0,13,0:14:255,39,0,185,35,149	1/2:0,11,10:24:255,119,56,132,0,70
-chr21	27283284	chr21:27283284:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:10:217,3,0	1/1:0,5:6:133,15,0	1/1:0,5:6:134,15,0
-chr21	27289363	chr21:27289363:M	ATATATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:0,44:44:255,130,0	1/1:0,42:43:255,126,0
-chr21	27291239	chr21:27291239:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,21:36:255,0,169	0/0:19,3:23:0,15,255	0/1:15,14:30:174,0,180
-chr21	27297370	chr21:27297370:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,5:22:255,80,29,255,0,253	1/1:0,30,2:34:255,96,0,255,64,255	1/2:1,11,12:24:255,166,157,180,0,130
-chr21	27298892	chr21:27298892:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:11:87,0,12	0/1:4,9:15:111,0,30	0/1:2,2:4:21,0,21
-chr21	27300538	chr21:27300538:M	TTTTTTATTTTTATTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,25:47:255,0,255	1/1:0,30:30:255,88,0	0/1:16,26:42:255,0,176
-chr21	27303089	chr21:27303089:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:31:174,0,220	0/0:33,0:34:0,100,255	0/1:20,27:47:255,0,229
-chr21	27312623	chr21:27312623:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:38,0,16	1/1:0,2:3:46,9,0	0/1:0,1:5:8,0,18
-chr21	27321410	chr21:27321410:M	TATCTATCATCTATCTTATCTATCTATCTATCTATCTATCTATCATCTATCTATCCACCTACCTATCTATC	<19.8>,<20.8>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,0,6:6:174,131,116,18,18,0	1/1:0,4,0:4:115,12,0,83,12,73	2/2:0,0,2:2:58,43,38,6,6,0
-chr21	27321658	chr21:27321658:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,37:38:255,111,0	1/1:0,40:40:255,120,0
-chr21	27322683	chr21:27322683:M	TGTGTGTGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,26:26:255,78,0	1/1:0,33:35:255,105,0
-chr21	27329320	chr21:27329320:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,49:49:255,144,0	1/1:0,41:41:255,121,0
-chr21	27330242	chr21:27330242:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:109,12,0	.	1/1:0,1:1:42,3,0
-chr21	27333318	chr21:27333318:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,30:53:255,255,255,255,0,255	1/1:0,31,1:32:255,94,0,255,76,255	1/2:0,26,21:47:255,255,252,255,0,255
-chr21	27335847	chr21:27335847:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:10:81,0,18	0/0:10,0:11:0,32,180	0/1:2,7:9:96,0,9
-chr21	27337467	chr21:27337467:M	TATATATATATATATATATATATA	<8>,<9>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,18,9:28:255,168,86,255,0,255	2/2:0,3,21:24:255,255,255,72,17,0	1/2:0,13,17:30:255,255,222,236,0,149
-chr21	27338345	chr21:27338345:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	.	1/2:0,2,3:5:139,47,33,32,0,17	1/1:0,3,0:5:114,15,0,82,14,72
-chr21	27348281	chr21:27348281:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:229,43,0	0/1:8,9:22:117,0,60	1/1:0,18:19:255,52,0
-chr21	27357584	chr21:27357584:M	AAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,108,0	0/1:22,22:46:255,0,255	1/1:0,32:33:255,99,0
-chr21	27364791	chr21:27364791:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:32:255,48,0	0/1:18,21:41:255,0,207	1/1:1,38:40:255,99,0
-chr21	27365015	chr21:27365015:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14,3:19:255,55,0,255,3,215	0/1:7,10,0:20:230,0,173,160,182,255	1/2:0,10,7:20:255,119,65,188,0,139
-chr21	27368218	chr21:27368218:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:86,9,0	0/1:1,0:5:5,0,32	1/1:0,4:5:128,15,0
-chr21	27369620	chr21:27369620:M	TTTTATTTTTATTTTATTTTATTTTATTTTATTTATTTTATTTTATTTTATTTTAT	<12.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,9:9:173,27,0	0/1:5,2:7:16,0,70	1/1:0,12:12:225,35,0
-chr21	27380980	chr21:27380980:M	TGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,28:35:255,92,0	0/1:16,7:24:134,0,255	1/1:0,27:32:255,95,0
-chr21	27380998	chr21:27380998:M	TATATATATATATATATATA	<12>	.	.	Motif=TA	GT:AD:DP:PL	0/0:24,0:27:0,80,255	0/0:20,0:21:0,63,255	0/1:18,12:33:177,0,255
-chr21	27384274	chr21:27384274:M	AAATAAAATAAAAT	<1.8>	.	.	Motif=AAATA	GT:AD:DP:PL	1/1:0,45:45:255,133,0	0/1:17,19:36:239,0,203	0/1:23,26:49:255,0,255
-chr21	27385910	chr21:27385910:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:44,8,0	0/1:2,1:3:8,0,24	1/1:0,9:9:153,26,0
-chr21	27388054	chr21:27388054:M	TATATATAGTATATAGTATATATAGTTATATAGTATTATTATATA	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:36,4:40:3,0,255	0/1:6,4:10:92,0,125	0/1:23,8:31:151,0,255
-chr21	27389584	chr21:27389584:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:83,0,102	0/1:5,2:8:11,0,73	1/1:0,12:13:222,38,0
-chr21	27393482	chr21:27393482:M	AAAAACAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAGAAGAAAAAGAAAAAAAAA	<76>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:49,9,0	1/1:0,1:2:16,3,0	0/0:2,0:2:0,6,32
-chr21	27400982	chr21:27400982:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,3,12	1/1:0,5:7:184,21,0	1/1:0,0:2:9,1,0
-chr21	27404660	chr21:27404660:M	ATACATACACACACACATACATAC	<5.5>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:47,0:47:0,141,255	0/1:16,17:33:255,0,255	0/1:26,19:45:255,0,255
-chr21	27405018	chr21:27405018:M	ACACACACACACACACACACACACACAC	<13>,<15>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,20,13,0:34:255,217,255,255,0,255,255,255,255,255	1/3:0,19,0,12:34:255,255,255,255,255,255,255,0,255,255	2/3:2,0,16,3:21:255,255,255,50,79,31,233,255,0,255
-chr21	27407722	chr21:27407722:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,28:29:255,84,0	1/1:1,30:31:255,67,0
-chr21	27407829	chr21:27407829:M	TATATATTATATAAAATATGTATATATAAATAATATATATTATACATAATATTATA	<29>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,11:11:215,33,0	1/1:0,3:3:55,9,0	1/1:0,12:12:228,35,0
-chr21	27411879	chr21:27411879:M	TTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,3:6:124,17,0	1/1:0,2:2:57,6,0
-chr21	27412866	chr21:27412866:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,34:34:255,102,0	0/1:18,14:35:255,0,255	0/1:21,23:46:255,0,255
-chr21	27419850	chr21:27419850:M	AAATAAATAAATAAATAAATAAATAAATAA	<6.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,39:40:255,118,0	1/1:0,35:35:255,103,0	1/1:0,33:33:255,97,0
-chr21	27421161	chr21:27421161:M	TTTTTTTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,18:20:255,41,0	0/1:2,7:10:92,0,22	0/1:2,7:9:99,0,9
-chr21	27421335	chr21:27421335:M	TTTTCTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,12:21:255,226,255,145,0,170	1/2:3,15,9:29:255,117,186,224,0,255	2/2:2,0,19:21:255,255,255,26,57,0
-chr21	27424968	chr21:27424968:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:120,0,150	0/1:3,9:13:209,0,44	0/1:2,5:10:124,0,34
-chr21	27425068	chr21:27425068:M	TTGTTATTGTTGTTGTTCGTTG	<8.3>	.	.	Motif=TTG	GT:AD:DP:PL	1/1:0,21:22:255,55,0	0/1:16,15:32:174,0,194	1/1:0,24:25:255,73,0
-chr21	27425091	chr21:27425091:M	TTTCTTTCTTTCCTCTTCCTTCCTTCCTTTCTTCCTTCCTTCCTTCTTTCTT	<4.2>,<33.8>	.	.	Motif=TTTC	GT:AD:DP:PL	0/2:6,0,8:14:55,73,208,0,135,113	0/0:12,0,2:15:0,36,255,18,255,255	0/1:5,8,4:22:161,0,88,140,76,241
-chr21	27425193	chr21:27425193:M	CTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTTCTTCTTTTCTTTTCTTT	<33.8>	.	.	Motif=CTTT	GT:AD:DP:PL	1/1:0,8:8:95,22,0	1/1:0,2:7:23,5,0	1/1:0,4:7:47,11,0
-chr21	27426776	chr21:27426776:M	GTGTGTGTGTGTGTGTGTGTGT	<12>,<14>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,19,0:36:255,0,218,255,255,255	0/2:24,0,24:50:255,255,255,0,255,255	0/1:22,14,0:36:154,0,255,255,255,255
-chr21	27429363	chr21:27429363:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,9:25:109,0,142	0/1:15,24:44:255,0,111	1/1:1,35:43:255,107,0
-chr21	27431644	chr21:27431644:M	AAAAAAAAAAAAAAAAA	<11>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,7:23:62,129,255,0,255,220	1/2:3,23,5:31:255,35,94,255,0,255	0/0:24,0,1:27:0,80,255,61,255,255
-chr21	27431810	chr21:27431810:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:12:1,0,134	0/0:28,1:29:0,68,255	0/1:7,8:16:103,0,77
-chr21	27444341	chr21:27444341:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:21:104,0,150	0/0:16,0:16:0,47,255	1/1:2,15:17:234,14,0
-chr21	27445915	chr21:27445915:M	TAGATGGATACATAGGTAGACACATAGATAGATACATAGATA	<11.5>,<12.5>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:1,13,2:16:228,29,0,183,12,200	1/1:1,17,0:18:255,36,0,255,52,255	2/2:0,0,15:15:255,255,255,45,44,0
-chr21	27447655	chr21:27447655:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,22,9,0:35:255,255,196,255,0,255,255,174,255,255	2/3:0,0,5,6:11:255,255,255,100,100,68,83,83,0,51	1/3:0,12,0,5:17:255,135,99,255,85,255,255,0,255,255
-chr21	27451701	chr21:27451701:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,29:33:255,57,0	1/1:0,33:34:255,97,0	1/1:2,33:37:255,72,0
-chr21	27457671	chr21:27457671:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1,0:20:0,40,255,59,255,255	0/1:19,22,0:41:255,0,216,255,255,255	0/2:22,0,13:36:142,241,255,0,255,255
-chr21	27459419	chr21:27459419:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:34:255,82,0	0/1:13,20:35:255,0,122	1/1:2,37:41:255,84,0
-chr21	27462244	chr21:27462244:M	ACACACACACACACACACACAC	<10.5>,<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:3,0,24:30:255,255,255,0,41,1	0/2:15,0,11:27:225,255,255,0,181,255	1/2:1,27,13:44:255,255,255,255,0,255
-chr21	27463499	chr21:27463499:M	ACACACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:19:255,54,0	0/1:18,22:40:255,0,255	0/1:19,16:36:255,0,255
-chr21	27465654	chr21:27465654:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:24:0,69,255	0/0:17,0:19:0,54,255	0/1:13,8:25:148,0,255
-chr21	27466676	chr21:27466676:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,48:48:255,142,0	0/1:26,29:55:255,0,255	1/1:0,49:49:255,144,0
-chr21	27471190	chr21:27471190:M	AAAAAAAATACAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5,0:16:47,0,163,81,207,255	0/1:10,12,0:22:150,0,115,180,177,255	0/2:7,0,7:14:157,127,218,0,127,160
-chr21	27473868	chr21:27473868:M	CACACAGACACACACACACACACACACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:27,0:27:0,79,255	0/1:14,15:31:187,0,187
-chr21	27480671	chr21:27480671:M	ACACCACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,39:40:255,109,0	0/1:8,15:23:192,0,71	0/1:16,16:33:191,0,192
-chr21	27486540	chr21:27486540:M	ATATACATACATATATATATGTATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/0:27,0:27:0,81,255	0/1:8,15:24:255,0,151
-chr21	27488619	chr21:27488619:M	TTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,2:7:176,34,14,85,0,66	0/2:4,0,3:8:63,49,148,0,110,104	1/1:0,3,0:3:83,9,0,59,9,51
-chr21	27492969	chr21:27492969:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/0:31,0:31:0,93,255	0/1:15,7:23:136,0,255
-chr21	27496900	chr21:27496900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,10:21:110,0,127	0/0:12,0:12:0,35,197	0/1:9,9:19:104,0,97
-chr21	27501207	chr21:27501207:M	TTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:21:47,0,255	0/1:15,5:20:59,0,255	0/1:20,6:28:84,0,255
-chr21	27501555	chr21:27501555:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,38:40:255,81,0	1/1:0,38:39:255,114,0	0/1:26,14:40:138,0,255
-chr21	27503971	chr21:27503971:M	ACACACACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:2,10,4,0:16:255,34,97,234,0,255,255,126,255,255	2/3:0,0,9,4:13:232,255,255,105,106,75,147,237,0,218	1/2:2,12,7,0:22:255,85,170,255,0,255,255,204,255,255
-chr21	27509416	chr21:27509416:M	ACACACACACACACACACACACACACACACACACACAC	<18>,<21>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,14,11:25:255,255,255,250,0,255	1/1:1,20,0:24:255,30,0,255,48,255	0/2:11,0,9:21:199,238,255,0,193,252
-chr21	27514789	chr21:27514789:M	ACACACACACACACACATACACAC	<11>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,19:38:255,0,254	0/0:37,2:39:0,78,255	0/1:21,25:46:255,0,255
-chr21	27522644	chr21:27522644:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<17.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7:8:215,22,0	.	1/1:0,0:3:4,2,0
-chr21	27523022	chr21:27523022:M	AATAATAATAATAATAATAATA	<8.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:20,13:33:154,0,255	0/1:17,12:30:130,0,230	0/0:22,0:23:0,67,255
-chr21	27529516	chr21:27529516:M	TTTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:170,21,0	0/1:3,11:14:255,0,39	.
-chr21	27531879	chr21:27531879:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:4:0,9,70	0/1:3,1:7:37,0,51	0/1:3,3:7:53,0,51
-chr21	27540985	chr21:27540985:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,110,0	1/1:0,47:47:255,138,0	0/1:25,17:42:196,0,255
-chr21	27541214	chr21:27541214:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:41,0,6	0/1:6,3:9:24,0,75	0/1:6,2:9:9,0,88
-chr21	27552656	chr21:27552656:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:1,25:27:255,61,0	0/1:20,13:34:135,0,255
-chr21	27558016	chr21:27558016:M	ACACACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,5:25:33,0,255	0/1:11,16:27:208,0,116	0/0:31,1:33:0,66,255
-chr21	27559114	chr21:27559114:M	TTTTATTCTATTTTATTTTATTTTATTTTATTTTAT	<4.2>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:16,27:43:255,0,255	0/0:33,0:33:0,99,255	0/1:8,22:30:255,0,131
-chr21	27561187	chr21:27561187:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:9:9,0,97	0/1:6,3:11:31,0,73	0/0:19,1:22:0,46,255
-chr21	27567038	chr21:27567038:M	ATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/0:51,1:52:0,135,255	0/1:14,10:24:109,0,181	0/0:35,2:37:0,72,255
-chr21	27587785	chr21:27587785:M	TATATATATTATATTATGTGACATATATTTTATATATATTATATATATATA	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:19,4:24:53,0,255	0/1:4,1:5:10,0,84	0/1:5,3:8:52,0,100
-chr21	27590230	chr21:27590230:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:37:255,0,163	1/1:4,37:42:255,52,0	0/1:13,17:30:224,0,150
-chr21	27594389	chr21:27594389:M	TGGTTGGTTGGTTGGTTG	<5.5>	.	.	Motif=TGGT	GT:AD:DP:PL	0/1:23,12:35:130,0,255	1/1:0,47:47:255,138,0	0/0:39,0:39:0,115,255
-chr21	27606894	chr21:27606894:M	TTGTTGTTGTTGTTGTTGTTTTGTTTTGTTTTGTTTTTGT	<16>,<17.7>,<19.3>	.	.	Motif=TTG	GT:AD:DP:PL	1/3:0,11,0,9:20:255,250,217,255,250,255,255,0,255,255	1/1:0,17,0,0:17:255,51,0,255,51,255,255,51,255,255	2/3:0,0,8,10:18:255,255,255,255,255,253,225,225,0,195
-chr21	27607235	chr21:27607235:M	TCTTTTTCTTTTTTTTTT	<3.2>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/1:23,17:40:230,0,255	1/1:2,44:46:255,96,0	0/0:35,0:35:0,104,255
-chr21	27608798	chr21:27608798:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,9,0,10:19:255,255,241,255,182,255,242,0,163,209	2/3:0,2,12,11:25:255,255,255,193,157,121,226,143,0,158	1/1:0,20,0,0:23:255,65,0,255,65,255,255,66,255,255
-chr21	27610328	chr21:27610328:M	TTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,6:22:255,158,110,255,0,255	1/2:0,2,10:16:255,255,255,58,0,17	1/1:1,24,0:32:255,48,0,255,89,255
-chr21	27627474	chr21:27627474:M	ATATATATATCTTTATATATATATATATATATAT	<16>,<23>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,4:15:245,101,69,169,0,255	1/1:0,3,0:3:49,9,0,57,9,86	1/2:0,5,3:8:146,77,62,83,0,149
-chr21	27628596	chr21:27628596:M	TATACATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,17,16:34:255,255,213,255,0,232	1/2:0,10,21:31:255,255,255,181,0,90	1/2:0,12,17:29:255,255,236,224,0,140
-chr21	27629606	chr21:27629606:M	AAAATAAATAAATAAATAAATAATAAAAATAAGAATAAAAATAAAAAT	<8.7>	.	.	Motif=AAAATA	GT:AD:DP:PL	0/1:12,5:17:122,0,255	0/1:4,7:11:209,0,70	0/1:13,9:22:242,0,255
-chr21	27647985	chr21:27647985:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<6.8>,<8.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,10,15:25:255,255,255,255,0,255	1/2:0,14,17:32:255,255,255,255,0,255	1/2:0,24,14:38:255,255,255,255,0,255
-chr21	27655297	chr21:27655297:M	TTCTTTTTTCTTTTTTCTTTTCTTTTCTTCTTCTTTTTTTTTTTT	<8>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:9,8:17:103,0,122	0/1:9,11:20:138,0,103	0/1:12,13:25:168,0,150
-chr21	27663587	chr21:27663587:M	AAACAAACAAAC	<3.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:37,13:52:206,0,255	0/1:22,25:49:255,0,255	0/1:15,18:33:255,0,255
-chr21	27665678	chr21:27665678:M	TTTTTTTTTTTATTTTGTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:25:152,0,170	0/1:20,16:36:178,0,248	0/1:19,16:36:188,0,252
-chr21	27676113	chr21:27676113:M	AAAAAAAAAAATAAAATAAAATAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,21:32:255,0,85	0/1:5,14:21:197,0,37	0/1:7,13:20:180,0,69
-chr21	27688423	chr21:27688423:M	TCTCCCTCTCTCTCTCTCTCTCT	<10.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,14:30:180,0,218	0/1:18,10:28:98,0,242	0/1:17,10:27:107,0,238
-chr21	27694000	chr21:27694000:M	AAAATAAAAATAAA	<2.5>	.	.	Motif=AAAATA	GT:AD:DP:PL	0/1:18,16:34:255,0,255	0/0:38,0:38:0,114,255	0/1:27,25:52:255,0,255
-chr21	27695616	chr21:27695616:M	TCTCTTTCTCTT	<1.3>	.	.	Motif=TCTCTT	GT:AD:DP:PL	0/1:15,21:36:255,0,255	0/1:13,19:32:255,0,255	0/1:9,17:27:255,0,174
-chr21	27714523	chr21:27714523:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,7:24:6,0,101	0/0:9,1:10:0,16,75	0/0:15,1:17:0,34,142
-chr21	27714551	chr21:27714551:M	TATATATATATATATATATA	<11>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:2,19,8:29:255,67,12,143,0,156	1/2:3,11,7:21:181,44,21,62,0,96	1/2:1,14,7:22:235,67,19,110,0,107
-chr21	27714655	chr21:27714655:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,13:16:255,39,0	1/1:0,17:20:255,51,0	1/1:0,16:21:255,19,0
-chr21	27741987	chr21:27741987:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,28:30:255,70,0	1/1:1,33:34:255,82,0
-chr21	27761385	chr21:27761385:M	AAAGAAAGACAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<16.8>,<20.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/2:0,9,3:13:255,75,48,235,0,229	2/2:0,0,5:5:140,142,144,15,15,0	1/2:0,8,1:9:231,25,1,209,0,209
-chr21	27769825	chr21:27769825:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,10:12:255,210,183,33,32,0	1/2:0,4,10:14:255,163,123,66,0,25	1/2:0,2,8:10:255,134,106,34,0,4
-chr21	27772078	chr21:27772078:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:40:255,112,0	1/1:0,33:33:255,97,0	1/1:0,31:32:255,91,0
-chr21	27781493	chr21:27781493:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,20:45:246,0,255	0/1:30,20:50:209,0,255	0/0:40,1:41:0,102,255
-chr21	27782690	chr21:27782690:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,23:47:255,255,255,255,0,255	2/2:0,2,34:40:255,255,255,113,81,0	1/2:1,25,16:44:255,255,186,255,0,255
-chr21	27784992	chr21:27784992:M	ACACACACACACACACACACACACACACACACACAAACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,20:22:255,64,0	0/1:14,13:29:157,0,156	1/1:0,29:30:255,88,0
-chr21	27786346	chr21:27786346:M	TGTGTGCGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,28:28:255,82,0	1/1:0,43:43:255,127,0
-chr21	27793653	chr21:27793653:M	TATATATATATATATATATATATATATATATAT	<12.5>,<13.5>,<14.5>	.	.	Motif=TA	GT:AD:DP:PL	2/3:0,0,13,12:26:255,255,255,215,224,152,230,197,0,158	1/2:0,4,2,0:7:179,34,14,79,0,61,154,29,78,145	1/3:0,8,0,7:16:255,187,173,255,130,228,214,0,138,188
-chr21	27797322	chr21:27797322:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>,<21.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,11,0:20:255,192,134,158,0,99,255,191,158,255	1/3:0,9,0,5:15:255,149,121,255,133,251,255,0,147,237	2/3:0,0,8,6:14:255,255,255,160,159,132,211,135,0,189
-chr21	27801363	chr21:27801363:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/0:37,0:37:0,108,255	0/1:12,13:26:159,0,141
-chr21	27804074	chr21:27804074:M	TTATTTATTTATTTATTTATTTATTTATTTATTTA	<7.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/1:11,23:34:255,0,112	0/1:16,18:34:227,0,191	0/0:30,0:30:0,89,255
-chr21	27804852	chr21:27804852:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,34:34:255,100,0	1/1:0,39:40:255,118,0
-chr21	27810529	chr21:27810529:M	ACACACACACACACACACACACACACACACACACACACA	<17.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,21,0:22:255,64,0,255,64,255	0/1:9,11,0:21:255,0,185,255,229,255	1/2:0,5,6:12:255,162,147,127,0,111
-chr21	27811041	chr21:27811041:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,43,255	0/1:11,14:25:170,0,118	0/0:37,3:41:0,67,255
-chr21	27811592	chr21:27811592:M	CACACACACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/0:43,0:44:0,130,255	0/1:19,30:50:255,0,214	0/1:18,21:39:255,0,222
-chr21	27815912	chr21:27815912:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:29:0,83,255	0/1:16,12:29:121,0,199	0/0:35,0:37:0,108,255
-chr21	27817799	chr21:27817799:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19,3:22:255,57,0,255,10,255	1/2:0,8,9:17:255,130,106,137,0,89	1/1:0,27,1:29:255,84,0,255,67,255
-chr21	27820032	chr21:27820032:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTACTTACTTATTT	<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:0,10:13:204,35,0	1/1:0,14:14:255,41,0
-chr21	27824230	chr21:27824230:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:12:208,35,0	1/1:0,11:13:210,38,0	1/1:0,15:15:255,44,0
-chr21	27827116	chr21:27827116:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:31:0,90,255	0/0:20,0:22:0,65,255	0/1:16,13:32:255,0,255
-chr21	27829055	chr21:27829055:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,72,255	0/0:30,0:33:0,95,255	0/1:18,7:27:107,0,255
-chr21	27836791	chr21:27836791:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,30	0/1:1,1:5:43,0,18	1/1:0,4:4:116,12,0
-chr21	27837650	chr21:27837650:M	AAAAAAAAAAAAAGAAAAGAAAAGAAAACAAAAA	<33>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:21,0,133	0/1:9,10:20:117,0,110	1/1:1,20:21:255,44,0
-chr21	27849622	chr21:27849622:M	TTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,15,128	0/0:9,0:12:0,33,255	1/1:0,18:20:255,28,0
-chr21	27851002	chr21:27851002:M	TTTTTTTTTTTTT	<11>,<12>	.	.	Motif=T	GT:AD:DP:PL	0/2:21,1,14:37:172,212,255,0,255,255	0/2:18,3,22:43:255,255,255,0,255,196	1/2:0,21,26:47:255,255,255,255,0,255
-chr21	27854747	chr21:27854747:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,2:24:0,24,255	0/1:19,4:24:0,0,255	0/1:13,14:29:185,0,151
-chr21	27859465	chr21:27859465:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:6:55,0,0	0/1:1,0:3:13,0,8	0/0:6,0:6:0,18,101
-chr21	27863795	chr21:27863795:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,22:44:255,0,255	0/1:20,29:49:255,0,213	0/1:23,23:46:255,0,255
-chr21	27866101	chr21:27866101:M	CACACACACATGCACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,32:32:255,94,0	1/1:0,37:37:255,109,0
-chr21	27873205	chr21:27873205:M	CCCCCCCCCCC	<10>,<12>	.	.	Motif=C	GT:AD:DP:PL	0/1:12,13,0:25:167,0,149,237,188,255	0/1:18,13,0:31:137,0,224,224,255,255	0/2:10,1,11:22:133,176,255,0,134,127
-chr21	27879186	chr21:27879186:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:46,0:46:0,138,255	0/0:38,0:38:0,114,255	0/1:20,22:43:255,0,255
-chr21	27881675	chr21:27881675:M	TTTTTTTTTTTTCTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,14,0:31:174,0,231,255,255,255	0/0:22,0,0:22:0,65,255,65,255,255	1/2:0,13,17:30:255,255,255,235,0,255
-chr21	27888391	chr21:27888391:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:18:47,0,255	0/1:10,1:15:32,0,254	0/1:9,7:18:173,0,215
-chr21	27894287	chr21:27894287:M	GTGTGTGTGTGTGTGTGTGT	<12>,<13>	.	.	Motif=GT	GT:AD:DP:PL	0/1:21,14,1:36:255,0,255,241,255,255	0/2:13,1,13:27:255,211,255,0,255,255	1/2:0,22,15:37:255,255,167,255,0,255
-chr21	27902942	chr21:27902942:M	AAAAAAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5,0:9:159,0,52,146,66,199	0/1:1,3,0:7:75,0,61,60,37,98	1/2:1,3,3:9:137,43,80,36,0,57
-chr21	27903765	chr21:27903765:M	ATATATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,18:39:225,0,141	0/1:15,22:39:245,0,116	1/1:0,45:45:255,130,0
-chr21	27904539	chr21:27904539:M	GAGGGAGGGAGGGA	<4.5>	.	.	Motif=GAGG	GT:AD:DP:PL	0/1:23,16:39:78,0,159	0/0:20,6:26:0,2,158	0/1:35,16:51:45,0,255
-chr21	27908706	chr21:27908706:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:122,21,0	0/1:4,7:14:92,0,33	0/0:0,0:2:0,0,1
-chr21	27910087	chr21:27910087:M	TAGTAGTAGTAGTAGTA	<6.7>	.	.	Motif=TAG	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/0:37,0:37:0,109,255	0/1:25,13:38:134,0,255
-chr21	27911651	chr21:27911651:M	AAAAAAACAAAAAACAAAACAAAAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:31,0:33:0,96,255	0/1:21,9:30:76,0,255
-chr21	27920809	chr21:27920809:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,3,30	0/1:1,0:2:10,0,21	0/1:5,3:10:55,0,132
-chr21	27932757	chr21:27932757:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2,0:4:48,0,20,35,17,44	1/1:0,3,0:5:98,12,0,72,12,63	1/2:0,2,6:9:147,85,76,44,0,20
-chr21	27940508	chr21:27940508:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,3:7:68,0,78	1/1:0,9:11:255,32,0	0/0:16,0:17:0,51,255
-chr21	27943150	chr21:27943150:M	ATTATTATTATTATTATT	<8>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,17:40:255,0,255	0/0:37,0:40:0,119,255	0/1:19,12:35:183,0,255
-chr21	27945556	chr21:27945556:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,4:7:63,0,16	0/1:1,3:5:48,0,3	0/1:7,5:13:50,0,95
-chr21	27946687	chr21:27946687:M	TTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:25:255,75,0	1/1:0,23:26:255,78,0	0/1:3,12:17:255,0,63
-chr21	27948655	chr21:27948655:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:8:127,15,0	1/1:0,5:7:152,18,0	0/1:4,1:6:13,0,97
-chr21	27948988	chr21:27948988:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:9:197,24,0	1/1:0,13:13:255,39,0	0/1:13,2:19:11,0,255
-chr21	27951397	chr21:27951397:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:16:174,6,0	0/1:5,6:11:71,0,53	0/0:18,1:19:0,38,255
-chr21	27955149	chr21:27955149:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,5:18:89,0,255	0/1:7,6:16:125,0,168	0/0:12,0:14:0,31,255
-chr21	27958196	chr21:27958196:M	ACACACACACACACACACACACACACACACACACAC	<24>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,5:17:89,0,255	0/1:12,5:22:86,0,255	0/1:17,4:25:66,0,255
-chr21	27963693	chr21:27963693:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:24:203,0,255	0/1:9,15:29:255,0,172	0/1:9,13:22:255,0,179
-chr21	27966629	chr21:27966629:M	CACACACACACACACACACACACACACGCACA	<15>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,14:24:190,0,117	0/1:20,16:36:177,0,248	0/1:14,16:30:203,0,168
-chr21	27970738	chr21:27970738:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,16:30:204,0,151	0/1:8,10:19:116,0,93	0/1:13,9:23:93,0,172
-chr21	27977886	chr21:27977886:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:57,0,3	0/0:6,1:7:0,3,85	0/1:1,6:10:87,0,11
-chr21	28000880	chr21:28000880:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:22:255,64,0	1/1:0,7:10:140,26,0	1/1:1,13:14:211,23,0
-chr21	28007950	chr21:28007950:M	TTGTTGTTGTTTGTTTGTTTTTGTTGTTGTTGTTATTGTTG	<14>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:29,12:46:0,15,114	0/1:25,14:40:3,0,74	0/0:27,9:38:0,19,109
-chr21	28009794	chr21:28009794:M	CACACACACACACACACATTCTAGATACCCACACACATACACACATAAACACACACACACACACACACACACACA	<33.5>,<36.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:3,11,6:20:255,45,149,230,0,249	0/1:5,2,2:10:29,0,139,11,34,61	0/1:4,7,2:13:157,0,99,144,30,186
-chr21	28009932	chr21:28009932:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGTGTGTGT	<25>	.	.	Motif=TG	GT:AD:DP:PL	0/0:15,0:18:0,43,213	0/1:7,12:20:112,0,43	0/0:15,0:15:0,43,210
-chr21	28020603	chr21:28020603:M	AGAGAGAGAGAGA	<8.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:21,14:35:255,0,255	0/1:17,17:35:255,0,255	0/1:17,9:26:215,0,255
-chr21	28027198	chr21:28027198:M	TTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:26:175,0,255	0/1:17,7:29:143,0,255	0/1:12,4:20:76,0,255
-chr21	28034621	chr21:28034621:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,13:28:160,0,198	0/1:20,10:32:93,0,255	0/1:21,19:40:228,0,255
-chr21	28051047	chr21:28051047:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,7:12:95,0,48	1/1:1,13:15:220,26,0	0/0:16,0:17:0,50,255
-chr21	28051175	chr21:28051175:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATATAAAATATATATATA	<19.5>,<25.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,6:9:231,231,231,26,26,0	2/2:0,0,1:3:59,59,59,9,9,0	1/1:0,3,0:3:94,9,0,94,9,94
-chr21	28053599	chr21:28053599:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<22>,<24>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,16,0:32:255,0,255,255,255,255	1/2:0,8,6:18:255,164,128,225,0,198	0/1:13,4,0:20:78,0,255,119,255,255
-chr21	28055573	chr21:28055573:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<13>,<15>	.	.	Motif=GT	GT:AD:DP:PL	0/3:14,0,0,13:27:167,244,255,243,255,255,0,255,225,186	2/3:1,0,17,9:27:255,255,255,142,246,189,255,255,0,255	0/1:12,17,0,1:30:255,0,255,255,226,255,255,200,255,255
-chr21	28056344	chr21:28056344:M	AAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,16,1:30:255,0,248,255,255,255	1/1:0,23,0:25:255,74,0,255,73,255	0/2:18,1,21:40:255,255,255,0,255,255
-chr21	28058283	chr21:28058283:M	TGTTTTTTTTTGTTTGTTTGTTTGTTT	<7>	.	.	Motif=TGTT	GT:AD:DP:PL	0/1:13,15:28:255,0,214	1/1:1,33:34:255,79,0	0/1:14,11:25:177,0,248
-chr21	28064292	chr21:28064292:M	AAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,0,3:22:24,73,255,0,255,255	2/2:0,0,11:13:255,255,255,38,36,0	0/1:7,9,0:18:206,0,160,233,193,255
-chr21	28066426	chr21:28066426:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,2:39:0,78,255	0/0:29,0:31:0,90,255	0/1:26,15:44:170,0,255
-chr21	28066490	chr21:28066490:M	AAAAAAAAAAGAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,25:41:255,0,186	1/1:0,33:33:255,97,0	0/1:25,16:41:181,0,255
-chr21	28071269	chr21:28071269:M	AAATAAATAAATAAATAAATAAATAAATA	<8.2>,<9.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,24,0:24:255,71,0,255,71,255	1/1:0,20,0:20:255,59,0,255,59,255	1/2:0,15,7:23:255,131,68,241,0,220
-chr21	28077985	chr21:28077985:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,3:44:0,73,255	0/1:24,26:52:255,0,255	0/0:37,4:43:0,53,255
-chr21	28079036	chr21:28079036:M	CACACACACACACACACACACACACACACACACACACACACACACACACAGACGCACATACACACA	<26>,<28>,<30>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,3,5:8:255,249,244,146,146,132,95,90,0,75	1/2:0,6,10,0:16:255,255,255,172,0,134,255,255,172,255	3/3:0,0,0,10:11:255,255,255,255,255,255,33,33,30,0
-chr21	28081085	chr21:28081085:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:17:0,31,255	0/1:11,6:18:51,0,147	0/0:18,3:24:0,16,255
-chr21	28094804	chr21:28094804:M	AGATAGATAGATAGATAGATAGATAGACAGACAGACAGACAGACAGATAGAT	<13.2>	.	.	Motif=AGAT	GT:AD:DP:PL	1/1:0,16:16:146,40,0	1/1:0,21:22:191,52,0	1/1:0,22:22:201,55,0
-chr21	28098537	chr21:28098537:M	TTTATTTATTTAATTTTTTTAATTTA	<5.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:37,0:39:0,109,255	0/1:15,13:32:165,0,201	0/0:29,0:32:0,85,255
-chr21	28101323	chr21:28101323:M	AATATTAATATTA	<2.7>	.	.	Motif=AATATT	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:5,5:10:109,0,111	0/0:28,0:28:0,84,255
-chr21	28106215	chr21:28106215:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,17:36:212,0,249	0/0:16,0:16:0,47,255	0/1:30,28:58:255,0,255
-chr21	28106678	chr21:28106678:M	TTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:23,12:37:237,0,255	0/0:41,0:41:0,123,255
-chr21	28114773	chr21:28114773:M	TATATATATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:15,22:38:255,0,255	0/0:25,0:27:0,75,255	0/1:12,25:39:255,0,210
-chr21	28114796	chr21:28114796:M	ACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:40,0:40:0,119,255	0/1:20,10:32:132,0,255	0/0:49,0:49:0,146,255
-chr21	28120501	chr21:28120501:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:35:255,83,0	1/1:1,21:24:255,53,0	1/1:1,26:29:255,67,0
-chr21	28129676	chr21:28129676:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,23,13:37:255,225,139,255,0,255	1/1:1,31,0:32:255,76,0,255,94,255	1/2:1,19,21:42:255,255,255,255,0,241
-chr21	28132778	chr21:28132778:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:35:255,66,0	1/1:4,34:39:255,44,0	1/1:3,33:38:255,57,0
-chr21	28134457	chr21:28134457:M	GAATGAATGAATGAATGAATGAATGAATGAATGA	<7.5>,<10.5>	.	.	Motif=GAAT	GT:AD:DP:PL	0/2:21,0,17:38:255,255,255,0,255,255	0/1:13,16,0:29:208,0,153,255,236,255	0/2:15,0,9:24:190,236,255,0,255,255
-chr21	28136091	chr21:28136091:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,8,15:23:255,255,255,249,0,193	1/2:0,11,7:19:255,207,164,255,0,255	1/2:0,8,6:15:255,188,153,241,0,211
-chr21	28141738	chr21:28141738:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<8.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:4,8:12:184,0,74	0/0:25,0:25:0,75,255
-chr21	28142238	chr21:28142238:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:49:0,144,255	0/1:17,13:31:150,0,211	0/0:50,2:53:0,119,255
-chr21	28147674	chr21:28147674:M	ACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,5:17:92,0,223	0/0:10,0:10:0,30,255	0/1:3,4:8:97,0,56
-chr21	28149925	chr21:28149925:M	CGCGCGCGCGCGCG	<4>,<5>	.	.	Motif=CG	GT:AD:DP:PL	2/2:0,0,1:1:20,13,10,3,3,0	0/0:15,0,0:15:0,45,255,44,255,255	1/2:1,3,4:8:120,25,25,16,0,11
-chr21	28149938	chr21:28149938:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17.5>,<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,8,0:19:255,95,38,128,0,72,255,71,122,255	0/2:15,1,5,0:24:85,43,255,0,255,255,64,255,255,255	1/3:0,9,2,7:18:255,150,102,160,56,107,189,0,77,144
-chr21	28168360	chr21:28168360:M	TAAAATAAAAGGTATAATCAAATAAAAGAATAATAAAATAAAA	<8>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:13,8:21:146,0,255	0/0:27,0:27:0,81,255	0/1:20,18:38:255,0,255
-chr21	28168793	chr21:28168793:M	GTGTGTGTGTGGGTGTGTATGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,15:27:208,0,149	0/0:31,1:32:0,76,255	0/1:13,20:34:255,0,142
-chr21	28169645	chr21:28169645:M	AATTAATTAATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:13,16:29:223,0,166	0/0:30,0:30:0,88,255	0/1:17,16:33:203,0,223
-chr21	28173037	chr21:28173037:M	TATATATATATATATATATATATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	.	0/0:5,0:5:0,15,88	1/1:1,23:24:255,53,0
-chr21	28177833	chr21:28177833:M	AAAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:8,17:28:255,0,136	1/1:0,21:21:255,63,0
-chr21	28177937	chr21:28177937:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,37:43:255,91,0	0/1:12,8:22:80,0,124	0/1:21,25:47:255,0,209
-chr21	28179995	chr21:28179995:M	TATATATATACATATATAT	<11.5>,<12.5>,<15.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,20,13,0:33:255,140,43,201,0,112,255,141,209,255	0/2:19,0,16,0:35:255,153,255,0,255,255,255,255,255,255	1/3:0,8,0,3:12:195,66,43,142,64,127,147,0,86,194
-chr21	28180018	chr21:28180018:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<10>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:15,10:28:168,0,255	0/1:23,5:32:48,0,255	0/1:7,4:15:64,0,135
-chr21	28186676	chr21:28186676:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:89,9,0	0/0:8,0:9:0,14,234	0/1:2,1:5:16,0,70
-chr21	28188143	chr21:28188143:M	GAGAGAAAGACAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:17,24:41:255,0,187	0/1:25,19:44:226,0,255
-chr21	28194002	chr21:28194002:M	AAAAAAAAGAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,34:34:255,255,255,102,101,0	0/2:9,2,13:27:255,216,255,0,145,212	1/2:0,17,17:34:255,255,215,255,0,214
-chr21	28194845	chr21:28194845:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:80,9,0	.	1/1:0,1:1:26,3,0
-chr21	28205871	chr21:28205871:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:156,18,0	0/1:1,4:6:107,0,10	0/0:0,0:3:0,1,2
-chr21	28206704	chr21:28206704:M	TCTTTTGCTTTTTCTTTTCTTTTTTTTTTTTTTCTTTTTTTTT	<6.8>	.	.	Motif=TCTTTT	GT:AD:DP:PL	1/1:0,14:15:255,42,0	0/1:3,11:15:236,0,39	1/1:0,18:18:255,54,0
-chr21	28216326	chr21:28216326:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:24:0,42,255	0/0:27,1:30:0,70,255	0/1:11,15:27:189,0,126
-chr21	28225063	chr21:28225063:M	AAAGAAAAAGAAAGAAAGAGAAAAA	<2.5>	.	.	Motif=AAAGAA	GT:AD:DP:PL	0/1:32,14:46:131,0,255	0/1:40,9:49:26,0,255	0/1:17,8:37:96,0,255
-chr21	28234141	chr21:28234141:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,30,0:33:255,59,0,255,92,255	1/1:1,30,2:33:255,79,0,255,62,255	1/2:2,13,7:24:255,89,71,151,0,188
-chr21	28237991	chr21:28237991:M	CACACACACACACACACACACACACACACAC	<17.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,11:22:255,195,133,194,0,132	0/2:22,0,4:26:38,67,255,0,255,255	1/2:0,12,16:29:255,255,196,208,0,137
-chr21	28256095	chr21:28256095:M	ATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAATATAA	<8.2>,<9.2>	.	.	Motif=ATATA	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,3,0:5:76,0,9,48,0,40	1/2:0,4,6:10:255,112,84,75,0,46
-chr21	28264840	chr21:28264840:M	AAAAAAAAAAAAGATAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,0:28:0,83,255	0/0:29,0:32:0,92,255	0/1:22,9:32:146,0,255
-chr21	28264967	chr21:28264967:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/0:21,0:26:0,71,255	0/1:13,10:25:193,0,255
-chr21	28265082	chr21:28265082:M	AAAAACAAAAACAAAAAC	<5>	.	.	Motif=AAAAAC	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:22,0:22:0,66,255	0/1:13,10:23:195,0,255
-chr21	28266771	chr21:28266771:M	TTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTATTCTTTTTTTTTTTTTTTTT	<53>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:102,18,0	0/1:2,7:10:95,0,4	0/1:6,5:11:51,0,68
-chr21	28267754	chr21:28267754:M	TTTTTTTTTTTTTTTTTT	<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,12:14:210,245,255,23,41,0	0/2:2,0,11:14:148,185,255,0,35,4	1/2:0,10,4:18:255,67,65,255,0,255
-chr21	28284744	chr21:28284744:M	ACACACACACACACACACACACACACAC	<12>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,48:49:255,147,0	1/1:0,26:27:255,81,0
-chr21	28288702	chr21:28288702:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,2:8:12,0,73	0/1:3,3:7:40,0,30	0/0:10,0:10:0,29,172
-chr21	28292366	chr21:28292366:M	GAGAGAGAGAGAGAGAGAGAGA	<13>,<14>	.	.	Motif=GA	GT:AD:DP:PL	2/2:0,2,30:32:255,255,255,95,57,0	2/2:0,4,47:51:255,255,255,152,79,0	1/2:0,18,14:32:255,253,161,255,0,234
-chr21	28300160	chr21:28300160:M	ATTTATTTATTTATTTATTTATGTATTTATTTATTTATTTATTT	<10>	.	.	Motif=ATTT	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,12:12:220,35,0	0/1:12,16:28:220,0,144
-chr21	28309061	chr21:28309061:M	ATATATATGTGTATATATATATATATGCATATAAATATATATAT	<39>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:8:190,21,0	1/1:0,3:3:81,9,0	0/0:15,1:16:0,21,255
-chr21	28312992	chr21:28312992:M	AAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAA	<25>,<26>,<33>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,2,0:9:234,34,8,112,0,89,234,34,112,234	1/1:0,20,1,0:24:255,71,0,255,53,255,255,71,255,255	2/3:2,0,5,5:15:175,124,222,40,145,137,114,84,0,137
-chr21	28314045	chr21:28314045:M	AAAAGAAAAAAAAAAAACAAAAAAACAAAAAAAAA	<36>,<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28,1:30:255,70,0,255,70,255	1/2:0,12,4:16:255,68,22,173,0,161	1/1:0,21,0:21:255,62,0,255,62,255
-chr21	28314789	chr21:28314789:M	ATATATATATATATATATA	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:42,0:46:0,135,255	0/0:16,0:17:0,51,255	0/1:25,14:40:255,0,255
-chr21	28314875	chr21:28314875:M	TATATATAGATATATATATATATGTGTGTATATATATATATAT	<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,17:17:255,50,0	1/1:0,17:17:255,50,0
-chr21	28319699	chr21:28319699:M	ATAATATAATATATTATATATATATATATAAAATATAATATAAT	<9.6>,<10>	.	.	Motif=ATAAT	GT:AD:DP:PL	1/2:0,7,5:12:255,127,105,179,0,162	2/2:0,0,1:1:28,28,28,3,3,0	2/2:0,0,1:3:27,27,27,2,2,0
-chr21	28324507	chr21:28324507:M	CACACACACACACACACACACACACACACA	<18>,<19>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,11:18:255,196,145,124,0,73	1/2:0,15,9:25:255,153,81,255,0,195	0/2:17,2,10:31:224,138,255,0,255,255
-chr21	28330674	chr21:28330674:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16,0:19:255,38,0,255,53,255	1/1:2,15,0:19:237,22,0,255,50,255	1/2:1,6,5:13:146,68,100,95,0,146
-chr21	28334329	chr21:28334329:M	TATATAAATACATATACATATATATATGTACATTTATATATATATATATACACATTTTTATATATATACATATATATA	<40>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,10:10:189,30,0	.	0/0:2,0:2:0,6,37
-chr21	28336739	chr21:28336739:M	TATATATATATATATATATATATATATATAT	<21.5>,<22.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,3:7:197,47,26,63,0,42	.	2/2:0,0,2:4:63,37,31,6,6,0
-chr21	28341280	chr21:28341280:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:16:0,28,232	0/1:6,3:9:24,0,75	0/0:6,1:8:0,6,97
-chr21	28350605	chr21:28350605:M	GAGAGAGAGAGAGAGAGAGAGAG	<10.5>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,29:30:255,88,0	0/1:14,15:29:196,0,174
-chr21	28355701	chr21:28355701:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,19:40:240,0,250	0/1:22,18:41:193,0,255	0/1:26,20:47:232,0,255
-chr21	28356871	chr21:28356871:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,10:17:255,255,239,82,0,53	1/2:0,6,3:9:222,74,54,146,0,137	0/2:2,0,4:7:108,112,160,0,52,38
-chr21	28358629	chr21:28358629:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:30:148,0,202	0/1:16,24:42:255,0,152	0/1:20,21:43:246,0,247
-chr21	28364391	chr21:28364391:M	TTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<9.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,13:14:255,34,0	1/1:0,8:9:214,24,0	1/1:0,18:18:255,54,0
-chr21	28370023	chr21:28370023:M	TTTTGTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:20,16:37:184,0,245	0/0:46,0:46:0,136,255
-chr21	28374560	chr21:28374560:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:49:0,145,255	0/1:24,14:38:138,0,255	0/0:55,0:57:0,167,255
-chr21	28383471	chr21:28383471:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,29,0:52:255,0,255,255,255,255	0/1:27,29,1:57:255,0,255,255,255,255	1/2:2,18,20:40:255,255,255,255,0,255
-chr21	28388007	chr21:28388007:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<18>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,14,0:27:255,0,255,255,223,255	0/1:11,15,0:30:255,0,249,255,197,255	1/2:0,14,6:23:255,105,102,255,0,255
-chr21	28406523	chr21:28406523:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:95,4,0	1/1:0,5:5:66,14,0	1/1:0,8:11:84,5,0
-chr21	28409173	chr21:28409173:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:96,12,0	1/1:0,4:4:120,12,0	1/1:0,4:4:124,12,0
-chr21	28413975	chr21:28413975:M	TTTTTCTTTTTTTTTTTTTTTTCTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,1:3:11,0,6	1/1:0,5:6:73,6,0	0/0:1,0:2:0,6,29
-chr21	28414160	chr21:28414160:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,41,0	1/1:3,28:31:255,39,0	1/1:2,21:24:255,35,0
-chr21	28416295	chr21:28416295:M	TTTTTTTTTGTTTTTTTTTTTTTT	<23>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,5:8:180,142,134,44,0,51	1/2:0,2,3:12:119,95,101,21,0,41	1/2:1,5,1:9:101,35,35,66,0,142
-chr21	28416535	chr21:28416535:M	GGTTTGGGTTTGGGTTT	<22.5>	.	.	Motif=GGTTTG	GT:AD:DP:PL	0/0:45,6:51:0,79,255	0/1:36,12:48:3,0,255	0/0:40,3:43:0,92,255
-chr21	28417429	chr21:28417429:M	GTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<24>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,1,7:13:201,78,64,176,53,173,123,0,98,103	2/3:0,3,2,13:22:238,169,167,143,70,126,99,33,0,70	1/2:0,6,5,4:17:255,126,125,138,0,129,230,98,104,235
-chr21	28438165	chr21:28438165:M	TCTCTCTCTCTCT	<10.5>,<11.5>	.	.	Motif=TC	GT:AD:DP:PL	2/2:0,1,51:53:255,255,255,158,124,0	2/2:0,2,27:29:255,255,255,87,55,0	1/2:0,10,13:24:255,169,99,142,0,72
-chr21	28446082	chr21:28446082:M	CTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTGTCTCTC	<23.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,18:18:255,54,0	0/1:7,9:16:196,0,141
-chr21	28454591	chr21:28454591:M	TGTGTGTGTTTGTGTGTGTGTGTGTGTGCATGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,15:16:255,28,0	1/1:0,18:19:255,42,0	0/1:10,12:22:162,0,121
-chr21	28463741	chr21:28463741:M	ACAAACAAACAAACAAACAAA	<5.5>	.	.	Motif=ACAA	GT:AD:DP:PL	1/1:1,17:20:108,25,0	1/1:0,28:31:193,52,0	1/1:0,26:30:185,49,0
-chr21	28471376	chr21:28471376:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,49:49:255,144,0	0/1:25,25:50:255,0,255
-chr21	28472428	chr21:28472428:M	AAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,0,13:15:195,201,248,9,43,0	1/2:0,10,17:27:255,237,207,166,0,90	0/2:8,2,12:24:162,130,255,0,102,82
-chr21	28480083	chr21:28480083:M	CTCTCTCTCTCTCTCT	<6>	.	.	Motif=CT	GT:AD:DP:PL	1/1:1,26:33:255,37,0	1/1:0,28:40:255,62,0	0/1:12,18:38:255,0,255
-chr21	28480098	chr21:28480098:M	TATATATATATATATATATAT	<7.5>,<8.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,23,13:41:255,188,80,255,0,255	1/1:0,42,0:46:255,137,0,255,130,255	0/2:12,2,19:37:255,245,255,0,255,208
-chr21	28482391	chr21:28482391:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:1,31:34:255,81,0	0/1:15,10:27:101,0,209
-chr21	28485051	chr21:28485051:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:43,8,0	1/1:0,7:7:108,20,0	0/1:1,4:5:49,0,1
-chr21	28486604	chr21:28486604:M	AAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,27:27:255,80,0	1/1:0,27:27:255,80,0
-chr21	28495194	chr21:28495194:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,39:41:255,83,0	1/1:0,30:32:255,93,0	1/1:1,43:45:255,114,0
-chr21	28499874	chr21:28499874:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,40,0	0/1:7,25:34:255,0,32	1/1:2,33:36:255,60,0
-chr21	28501934	chr21:28501934:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:69,12,0	1/1:0,2:4:53,11,0	0/1:3,3:7:41,0,31
-chr21	28506326	chr21:28506326:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:62,11,0	1/1:0,2:3:43,8,0	1/1:0,6:7:113,20,0
-chr21	28512558	chr21:28512558:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:64,12,0	0/1:1,3:5:35,0,14	0/1:1,2:3:25,0,8
-chr21	28516788	chr21:28516788:M	ATATATATATATATATATATA	<11.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,17,13:31:255,249,163,255,0,228	1/2:0,4,7:11:242,122,92,60,0,39	1/1:1,44,0:45:255,114,0,255,132,255
-chr21	28540406	chr21:28540406:M	ATATACTATATATATATATATATGTCATATATA	<17.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,24:24:255,71,0	1/1:0,13:13:231,38,0	1/1:1,31:32:255,76,0
-chr21	28544464	chr21:28544464:M	TATATATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4:6:42,11,0	1/1:0,1:1:10,3,0	1/1:0,2:2:21,5,0
-chr21	28559670	chr21:28559670:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:13:195,20,0	0/1:1,6:11:91,0,8	1/1:0,8:10:121,9,0
-chr21	28561175	chr21:28561175:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,41:42:255,124,0	1/1:1,53:54:255,141,0	1/1:1,42:45:255,104,0
-chr21	28562301	chr21:28562301:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:19:72,0,155	0/1:11,10:23:107,0,145	0/0:29,3:34:0,43,255
-chr21	28562488	chr21:28562488:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:140,12,0	0/1:3,7:10:87,0,20	1/1:1,9:11:146,14,0
-chr21	28563171	chr21:28563171:M	CTCTCCCTCTCCCTCTCCCTCTCCC	<5.2>	.	.	Motif=CTCTCC	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,27:27:255,79,0	1/1:0,30:30:255,89,0
-chr21	28566812	chr21:28566812:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:168,17,0	0/1:2,4:8:55,0,14	1/1:2,11:13:155,4,0
-chr21	28569477	chr21:28569477:M	ACACACACACACACACACACACACACACACACACACACAC	<22>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,15:15:255,45,0	1/1:0,9:9:234,27,0	1/1:0,15:19:255,38,0
-chr21	28569628	chr21:28569628:M	ACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,34:34:255,100,0	1/1:0,43:43:255,127,0
-chr21	28572830	chr21:28572830:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<24>,<25>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,5,0:19:255,135,90,255,0,255,255,86,255,255	2/3:0,0,5,9:14:255,255,255,149,149,109,84,83,0,42	1/2:0,4,7,0:12:255,184,165,116,0,93,237,118,116,218
-chr21	28580569	chr21:28580569:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:55,9,0	1/1:0,4:4:70,12,0	0/1:1,6:8:85,0,4
-chr21	28585330	chr21:28585330:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATA	<10.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:8,3:11:22,0,113	1/1:0,25:25:255,74,0
-chr21	28587176	chr21:28587176:M	AAAAAAAAAAAAAA	<10>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:12,0,12:25:153,222,255,0,221,152	0/1:16,14,1:31:255,0,255,255,255,255	2/2:1,0,29:30:255,255,255,70,90,0
-chr21	28588983	chr21:28588983:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:12,5:19:34,0,166	0/0:17,2:24:0,29,255
-chr21	28595764	chr21:28595764:M	TTTATTTTACTTTATTTATTTATTTATTTATTTATTT	<10.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:13,9:22:109,0,186	0/1:6,15:21:210,0,47	1/1:0,25:25:255,74,0
-chr21	28601605	chr21:28601605:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<15.5>,<21.5>,<24.5>	.	.	Motif=TC	GT:AD:DP:PL	1/3:0,12,0,7:20:255,204,165,255,203,255,255,0,255,255	0/1:12,4,0,0:16:76,0,255,111,202,255,112,255,255,255	2/3:2,0,10,6:19:255,255,255,135,170,134,138,255,0,255
-chr21	28603550	chr21:28603550:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:11,0,2:18:46,83,255,0,255,255	1/2:0,6,6:14:255,163,142,179,0,161	0/0:22,0,0:23:0,69,255,69,255,255
-chr21	28608389	chr21:28608389:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:22:135,0,135	0/1:21,18:40:204,0,246	1/1:0,32:35:255,101,0
-chr21	28609568	chr21:28609568:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:18:159,0,57	1/1:0,14:19:255,52,0	0/0:15,0:18:0,50,255
-chr21	28611912	chr21:28611912:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,0,0:11:0,33,255,32,222,193	0/1:4,8,0:13:186,0,77,131,65,165	0/2:8,0,4:13:31,57,255,0,143,109
-chr21	28613075	chr21:28613075:M	GATAGATAGATAGATAGATAGAAAGATAGATAGATAGATAGATAGACAGATCTACAGATAGATAGATA	<16>	.	.	Motif=GATA	GT:AD:DP:PL	0/0:21,0:21:0,62,255	0/1:9,5:14:49,0,121	0/0:11,0:11:0,32,206
-chr21	28613620	chr21:28613620:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1,0:2:45,6,0,33,6,29	2/2:0,0,11:12:255,208,177,32,32,0	1/1:0,8,0:9:255,27,0,167,26,144
-chr21	28617791	chr21:28617791:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,8:24:255,127,82,255,0,196	1/2:0,15,13:29:255,192,144,255,0,191	1/1:0,36,0:37:255,111,0,255,109,255
-chr21	28631798	chr21:28631798:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,1:39:0,96,255	0/0:33,2:38:0,63,255	0/1:21,26:48:255,0,240
-chr21	28635102	chr21:28635102:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,3:33:0,41,255	0/0:21,3:25:0,11,255	0/1:13,6:20:58,0,176
-chr21	28647509	chr21:28647509:M	AAAAAAAAAAAAAAAAAGAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:6:52,0,17	1/1:1,7:8:100,7,0	1/1:0,6:8:122,23,0
-chr21	28649850	chr21:28649850:M	AATAATAAAATAATAA	<6.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/0:43,0:43:0,127,255	0/1:15,11:26:130,0,204
-chr21	28672960	chr21:28672960:M	AGAAAGAAAAAAAATAAAAAAAGAGAGAAAGAAAAAGAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGA	<16>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:5,6:11:74,0,55	0/1:4,0:8:1,0,50	0/1:3,1:5:6,0,40
-chr21	28700831	chr21:28700831:M	ACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/0:36,0:36:0,108,255	0/1:14,24:38:255,0,255
-chr21	28701547	chr21:28701547:M	CACACACACACATACACACACACACACACACACACACACACACACACACA	<15>,<24>	.	.	Motif=CA	GT:AD:DP:PL	0/2:8,0,13:21:169,228,255,0,142,81	0/2:7,0,11:19:142,194,255,0,118,63	0/1:4,15,1:20:255,0,68,255,52,255
-chr21	28702310	chr21:28702310:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:43:0,126,255	0/0:44,1:47:0,119,255	0/1:25,24:51:255,0,255
-chr21	28704558	chr21:28704558:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:23:0,67,255	0/1:9,4:15:23,0,124	0/1:10,23:35:255,0,77
-chr21	28705329	chr21:28705329:M	CTTTTCTTTTCTTT	<2>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/0:49,0:49:0,147,255	0/1:27,25:52:255,0,255
-chr21	28707257	chr21:28707257:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:20:0,57,255	0/0:18,0:21:0,62,255	0/1:16,11:30:221,0,255
-chr21	28708225	chr21:28708225:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/0:37,0:37:0,109,255	0/1:21,36:57:255,0,220
-chr21	28718618	chr21:28718618:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,2:45:0,95,255	0/0:45,0:45:0,132,255	0/1:30,33:63:255,0,255
-chr21	28724548	chr21:28724548:M	TTGTTTGTTTGTTTGTTTGTTT	<4.5>	.	.	Motif=TTGT	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/0:40,0:40:0,118,255	0/1:18,24:42:255,0,215
-chr21	28726870	chr21:28726870:M	AAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:17:0,50,255	0/0:18,0:22:0,64,255	0/1:9,6:20:118,0,217
-chr21	28730374	chr21:28730374:M	ACACACACAGACACACACACACACACACACACACACACACACACA	<21.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18,0:19:255,56,0,255,57,255	1/1:0,16,0:19:255,55,0,255,57,255	1/2:0,11,5:18:255,137,102,201,0,255
-chr21	28731760	chr21:28731760:M	AAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:36:0,96,255	0/0:34,0:39:0,113,255	0/1:12,28:41:255,0,209
-chr21	28746673	chr21:28746673:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,35:38:255,90,0	1/1:0,41:42:255,123,0	1/1:0,43:45:255,131,0
-chr21	28753357	chr21:28753357:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:15:0,39,255	0/0:8,0:9:0,27,221	0/1:15,16:35:255,0,255
-chr21	28761600	chr21:28761600:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:38:0,111,255	0/0:30,2:34:0,64,255	0/1:15,15:31:179,0,189
-chr21	28767425	chr21:28767425:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:35:0,103,255	0/0:46,0:47:0,138,255	0/1:14,20:34:255,0,157
-chr21	28771007	chr21:28771007:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/0:42,0:42:0,124,255	0/1:22,25:47:255,0,255
-chr21	28774589	chr21:28774589:M	AAAAAAAAAGAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:38:0,114,255	0/0:45,0:45:0,135,255	0/1:21,23:45:255,0,255
-chr21	28808412	chr21:28808412:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:24,1,12:38:114,201,255,0,255,255	1/2:3,16,15:35:255,207,255,232,0,255	0/2:19,2,9:30:70,121,255,0,242,255
-chr21	28811250	chr21:28811250:M	GAAAGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAAGAAAAGAAGAAAG	<33.8>	.	.	Motif=GAAA	GT:AD:DP:PL	0/0:22,0:24:0,66,255	0/0:12,0:14:0,36,255	0/1:12,7:19:17,0,250
-chr21	28819545	chr21:28819545:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,1:29:0,61,255	0/0:13,1:15:0,27,210	0/1:11,4:16:22,0,154
-chr21	28822573	chr21:28822573:M	ATATATATATATATATATACACATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/0:23,0:24:0,68,255	0/1:19,14:34:156,0,255
-chr21	28830878	chr21:28830878:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,3,13:18:214,147,185,19,2,0	2/2:1,0,14:15:206,209,233,28,43,0	1/2:1,6,6:13:201,64,70,79,0,60
-chr21	28856084	chr21:28856084:M	TTATTTTATTT	<1.2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:54,0:54:0,160,255	0/0:32,0:32:0,94,255	0/1:21,22:43:255,0,255
-chr21	28863411	chr21:28863411:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<12>	.	.	Motif=TA	GT:AD:DP:PL	0/0:0,0:4:0,0,0	1/1:0,5:5:155,15,0	.
-chr21	28864809	chr21:28864809:M	AGACAGACAGACAGA	<1.8>	.	.	Motif=AGAC	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,3:4:80,9,0	0/0:26,2:28:0,31,255
-chr21	28866176	chr21:28866176:M	ACACACACACACA	<7>,<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,9:19:234,166,129,56,0,153	1/2:0,3,11:14:255,211,183,17,0,19	0/0:25,3,2:30:0,31,114,36,162,255
-chr21	28877180	chr21:28877180:M	GAGGGAGGGAGGAAGGAAGGGAGGGAAGGGAG	<3.2>,<9>	.	.	Motif=GAGG	GT:AD:DP:PL	1/2:1,3,15:19:223,197,255,53,0,22	1/2:1,4,10:15:185,124,239,77,0,59	0/1:11,2,1:16:31,0,255,50,140,173
-chr21	28879081	chr21:28879081:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:174,18,0	1/1:0,1:1:29,3,0	1/1:0,2:3:67,9,0
-chr21	28880929	chr21:28880929:M	AAAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:19:0,55,255	0/0:17,0:22:0,61,255	0/1:4,3:10:32,0,61
-chr21	28881626	chr21:28881626:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,6:8:200,104,82,35,0,12	1/2:0,3,4:8:188,67,44,60,0,39	0/2:2,0,1:4:19,20,76,0,54,48
-chr21	28886202	chr21:28886202:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:30:255,84,0	1/1:0,36:40:255,108,0	0/1:21,14:38:255,0,255
-chr21	28888334	chr21:28888334:M	TTTTTTTTTTTTCTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:19:255,51,0	1/1:1,18:19:255,30,0	0/1:17,8:28:149,0,255
-chr21	28889765	chr21:28889765:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,0,24:26:255,255,255,75,72,0	1/2:0,7,11:18:255,255,255,182,0,145	1/2:0,12,6:20:255,174,131,255,0,255
-chr21	28894577	chr21:28894577:M	AAAAAAAAAAAGAAGAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:32:255,75,0	1/1:0,32:33:255,96,0	0/1:13,18:32:231,0,151
-chr21	28901231	chr21:28901231:M	AAGAAAAAAAAGAAAAGAAAAGAAAA	<4.8>	.	.	Motif=AAGAA	GT:AD:DP:PL	1/1:1,38:39:255,94,0	1/1:0,27:27:255,81,0	0/1:16,13:29:211,0,255
-chr21	28901258	chr21:28901258:M	ATATATATATATATATGTATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,34:35:255,100,0	1/1:0,27:27:255,79,0	0/1:20,16:36:168,0,236
-chr21	28914934	chr21:28914934:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,17:18:255,52,0	1/1:0,26:27:255,79,0
-chr21	28926896	chr21:28926896:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:30,24:55:255,0,255	0/0:31,2:37:0,72,255	0/1:16,14:33:169,0,215
-chr21	28931067	chr21:28931067:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,22:32:255,0,179	0/0:32,0:37:0,96,255	1/1:0,40:41:255,120,0
-chr21	28933678	chr21:28933678:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,14:28:151,0,42	0/0:19,0:21:0,46,246	0/1:6,11:21:92,0,65
-chr21	28935840	chr21:28935840:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:23,0,23	0/0:12,1:14:0,24,192	0/1:7,4:12:34,0,94
-chr21	28947891	chr21:28947891:M	AAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,80,0	0/1:11,4:17:81,0,255	0/1:11,7:20:139,0,255
-chr21	28955923	chr21:28955923:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:83,9,0	0/0:4,0:6:0,15,123	0/1:3,6:9:138,0,58
-chr21	28960357	chr21:28960357:M	AAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAAAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:15:0,44,255	0/0:23,0:23:0,67,255	0/1:16,8:24:72,0,214
-chr21	28976119	chr21:28976119:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:32:165,0,230	0/1:17,25:42:255,0,174	0/0:32,0:33:0,87,255
-chr21	28977374	chr21:28977374:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:30,0,66	0/0:12,0:12:0,35,204	0/1:4,8:15:126,0,27
-chr21	28977928	chr21:28977928:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,4:23:9,0,255	0/1:23,8:31:49,0,255	0/0:35,0:35:0,103,255
-chr21	28980570	chr21:28980570:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,29:49:255,0,225	0/1:28,22:52:248,0,255	0/0:52,0:53:0,156,255
-chr21	28984653	chr21:28984653:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/0:46,1:48:0,121,255	0/1:16,16:33:195,0,205
-chr21	28988142	chr21:28988142:M	AAAAAAAAAAAAAAACAACAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,4:10:41,0,76	0/1:6,5:11:51,0,69	0/0:13,1:15:0,26,216
-chr21	28988467	chr21:28988467:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,3,4:20:15,16,232,0,146,212	0/0:23,1,1:25:0,56,255,56,255,255	1/2:1,19,12:35:255,200,244,255,0,255
-chr21	28991291	chr21:28991291:M	AAAAAAAAAAAAAAGAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:27:255,62,0	1/1:0,23:25:255,73,0	1/1:0,35:38:255,108,0
-chr21	28994777	chr21:28994777:M	ATATATATATATATATATTTATGCATATATATATAATATA	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,9:14:130,0,53	0/1:7,9:16:114,0,78	0/0:13,0:13:0,38,240
-chr21	28996019	chr21:28996019:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:27:0,76,255	0/1:11,8:21:79,0,130	0/1:16,7:25:50,0,203
-chr21	28996948	chr21:28996948:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:32:137,0,222	0/0:24,0:26:0,76,255	0/1:1,13:22:207,0,9
-chr21	29002115	chr21:29002115:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,18:20:255,22,0	0/0:11,1:13:0,21,184	0/1:14,17:33:219,0,164
-chr21	29003606	chr21:29003606:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:153,57,42,81,0,68	2/2:0,0,4:4:115,112,109,12,12,0	1/2:0,4,2:8:171,49,30,119,0,111
-chr21	29009393	chr21:29009393:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,13:19:196,0,17	0/1:7,10:18:129,0,68	0/0:9,1:10:0,12,142
-chr21	29010608	chr21:29010608:M	AAAAAATAAAAATAAAAAAAAAAAACCAAAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:19:63,0,144	0/0:7,1:8:0,6,103	0/1:3,2:5:21,0,38
-chr21	29012771	chr21:29012771:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,1:30:0,70,255	0/1:14,24:39:255,0,145	0/0:50,2:53:0,111,255
-chr21	29013689	chr21:29013689:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,0:13:0,35,207	0/0:16,0:17:0,49,255	0/1:2,3:5:36,0,19
-chr21	29016564	chr21:29016564:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,30:47:255,0,180	0/1:21,24:45:255,0,239	0/0:41,0:41:0,121,255
-chr21	29019351	chr21:29019351:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:29:255,86,0	1/1:0,37:38:255,114,0	1/1:0,27:28:255,81,0
-chr21	29019534	chr21:29019534:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,16,0:17:255,32,0,255,50,255	1/2:2,5,6:14:185,69,66,38,0,70	0/1:14,11,0:25:122,0,176,164,246,255
-chr21	29021802	chr21:29021802:M	AAAAAAAAGAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,13:24:179,0,115	0/1:13,16:31:190,0,155	0/1:12,15:30:187,0,151
-chr21	29026456	chr21:29026456:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:20,0,9	0/1:4,8:12:100,0,33	1/1:0,8:9:149,26,0
-chr21	29026538	chr21:29026538:M	TTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:4:0,12,96	0/0:0,0:1:0,3,12	1/1:0,6:7:175,17,0
-chr21	29028124	chr21:29028124:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,7:22:63,0,211	0/1:13,7:22:66,0,173	0/1:7,6:13:69,0,87
-chr21	29034298	chr21:29034298:M	TTTTCTTTTTTTTTTTTTTTTTATTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,9:18:117,0,91	0/1:11,8:19:81,0,132	0/1:6,5:13:60,0,77
-chr21	29037580	chr21:29037580:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,1:4:5,14,90,0,51,40	0/1:2,2,0:4:52,0,44,33,32,54	1/2:0,3,3:6:126,42,33,51,0,33
-chr21	29044448	chr21:29044448:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,2,6:15:67,73,225,0,72,105	1/2:3,13,3:19:178,7,36,179,0,255	0/0:15,0,1:16:0,47,255,29,254,251
-chr21	29047910	chr21:29047910:M	TGTGTGTGTGTGT	<4.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/0:33,0:33:0,99,255	0/1:26,26:53:255,0,255
-chr21	29048049	chr21:29048049:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,7:15:162,0,152	0/0:6,0:7:0,18,167	1/1:0,7:9:193,20,0
-chr21	29054601	chr21:29054601:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:5:17,4,0	1/1:0,4:8:155,18,0	1/1:0,0:2:28,6,0
-chr21	29057167	chr21:29057167:M	TTTTTTTTTTTTTTTCTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:25:99,0,200	0/1:10,11:21:130,0,112	0/0:27,0:28:0,82,255
-chr21	29058594	chr21:29058594:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:174,29,0	1/1:3,17:21:254,9,0	1/1:0,15:16:255,44,0
-chr21	29060086	chr21:29060086:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12:30:127,0,236	0/0:24,1:26:0,59,255	1/1:0,27:28:255,82,0
-chr21	29066082	chr21:29066082:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:23:255,66,0	1/1:0,13:14:255,39,0	1/1:0,12:12:255,36,0
-chr21	29083833	chr21:29083833:M	TGTGTGTGTGTGTGTATATATGTGTGTGTGTGTGT	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:27:0,78,255	0/0:14,0:14:0,41,251	0/1:13,7:20:71,0,182
-chr21	29087579	chr21:29087579:M	TTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,1:9:13,0,78	0/1:3,1:6:11,0,44	1/1:0,6:9:123,23,0
-chr21	29089169	chr21:29089169:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,3:3:89,89,89,9,9,0	2/2:0,0,2:4:86,86,86,12,12,0	1/1:0,11,0:13:255,39,0,255,39,255
-chr21	29095142	chr21:29095142:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	0/1:15,12:27:130,0,185	1/1:2,13:16:209,10,0
-chr21	29100084	chr21:29100084:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:12:97,0,27	0/1:5,2:8:19,0,60	0/0:1,0:1:0,3,17
-chr21	29102460	chr21:29102460:M	TCTCTCTCTCTCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:22,0:24:0,69,255	0/0:17,0:19:0,56,255	0/1:11,10:23:164,0,221
-chr21	29102478	chr21:29102478:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2,4:13:52,0,89,2,19,35	0/1:4,1,0:9:1,0,113,12,76,73	1/2:1,5,7:16:181,61,65,64,0,41
-chr21	29111265	chr21:29111265:M	AAAAACAAAACAACAACAACAACAACAACAAAAA	<5.2>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,31:31:255,93,0	0/1:18,19:37:255,0,255	1/1:0,30:30:255,90,0
-chr21	29119663	chr21:29119663:M	TTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,8,5:15:202,88,93,104,0,204	0/1:11,5,0:17:35,0,148,84,194,255	1/2:1,6,2:11:139,45,39,88,0,150
-chr21	29120180	chr21:29120180:M	TTTTCTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,23:47:255,0,255	0/0:32,0:32:0,94,255	0/1:16,18:34:231,0,192
-chr21	29120657	chr21:29120657:M	TTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTTTCTGTTTCTTTCTTTCCTTTCTCTCCTTCTCTCTTTCTTT	<17>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,9:9:146,26,0	0/1:3,3:6:30,0,30	1/1:0,7:7:112,20,0
-chr21	29121056	chr21:29121056:M	ATATATATATATAGTGTATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,3:3:35,8,0	0/0:22,0:22:0,66,255	.
-chr21	29123056	chr21:29123056:M	TTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:83,9,0	0/1:1,3:6:91,0,10	1/1:0,1:2:42,6,0
-chr21	29128306	chr21:29128306:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:33:190,0,209	0/0:21,0:24:0,69,255	0/1:18,11:29:114,0,242
-chr21	29131818	chr21:29131818:M	TATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,15:37:255,0,255	0/0:57,0:57:0,171,255	0/1:32,21:53:255,0,255
-chr21	29136508	chr21:29136508:M	TTTTTTTCTTTTCTTTTTTATTTTATTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:17,8:25:70,0,232	1/1:0,33:33:255,97,0
-chr21	29139896	chr21:29139896:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:51,9,0	0/0:1,0:1:0,3,16	.
-chr21	29141513	chr21:29141513:M	AAAAAGAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:17:149,0,43	0/1:13,15:31:184,0,142	0/1:10,7:17:72,0,124
-chr21	29150772	chr21:29150772:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:24:0,52,255	0/1:4,6:10:73,0,39	0/0:23,2:26:0,41,255
-chr21	29154392	chr21:29154392:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:28:255,82,0	0/1:13,14:29:171,0,154	1/1:0,32:33:255,97,0
-chr21	29158918	chr21:29158918:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:7:51,0,15	0/1:4,4:8:44,0,43	0/1:6,6:13:73,0,65
-chr21	29159826	chr21:29159826:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,1,36:38:255,255,255,93,93,0	1/2:1,24,16:41:255,224,177,255,0,255	2/2:0,0,45:45:255,255,255,133,133,0
-chr21	29162312	chr21:29162312:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:40:255,108,0	0/1:25,23:49:255,0,255	1/1:1,40:42:255,96,0
-chr21	29162684	chr21:29162684:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,16:21:232,0,30	0/1:17,11:30:116,0,211	0/1:18,16:34:187,0,223
-chr21	29163353	chr21:29163353:M	TATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:18,29:47:255,0,210	0/0:56,0:56:0,165,255	0/1:25,29:54:255,0,255
-chr21	29163694	chr21:29163694:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:19:37,0,171	0/1:10,3:15:16,0,133	0/1:7,9:17:111,0,70
-chr21	29167694	chr21:29167694:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,4:11:228,70,41,89,0,65	1/2:1,6,2:13:189,7,35,75,0,77	1/2:0,6,5:11:255,86,55,103,0,71
-chr21	29170622	chr21:29170622:M	TCTCTCTCTCTTTCTCT	<7>	.	.	Motif=TC	GT:AD:DP:PL	0/1:23,9:41:174,0,255	0/0:43,0:43:0,129,255	0/1:19,15:42:255,0,255
-chr21	29170638	chr21:29170638:M	TTTTTTTTTTCTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,20:39:242,0,224	0/0:37,0:37:0,108,255	0/1:13,18:31:222,0,136
-chr21	29170940	chr21:29170940:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,23:40:255,0,255	1/1:0,29:33:255,95,0	0/1:17,20:40:255,0,255
-chr21	29171807	chr21:29171807:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:8:116,0,33	1/1:0,4:6:128,17,0	0/1:3,5:11:112,0,68
-chr21	29172237	chr21:29172237:M	TTTTCTTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,4:12:184,72,92,144,0,222	1/1:0,41,0:43:255,126,0,255,129,255	1/2:0,19,2:23:255,35,3,255,0,255
-chr21	29176088	chr21:29176088:M	TCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCT	<19>,<28>,<36>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	2/4:0,1,6,0,4:12:187,158,168,25,6,20,190,166,33,197,152,133,0,160,154	1/3:0,2,2,3,1:10:95,42,87,53,39,97,62,0,10,50,97,83,94,54,145	1/2:0,3,4,0,0:11:234,116,109,114,0,106,236,121,119,240,236,122,120,241,242
-chr21	29176172	chr21:29176172:M	TTTTTTTCTTTCTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:12:78,21,0	1/1:1,10:18:87,19,0	1/1:0,11:17:107,29,0
-chr21	29179544	chr21:29179544:M	CAAACAAACAAACAAACA	<5.5>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:12,15:27:193,0,139	1/1:0,34:34:255,100,0
-chr21	29180911	chr21:29180911:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>,<13.8>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:9,15,1:26:213,0,118,255,136,255	1/2:0,2,9:11:166,160,228,35,0,25	0/2:11,0,11:23:150,211,255,0,174,139
-chr21	29186228	chr21:29186228:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<12>,<13>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,1,28:29:255,255,255,84,67,0	1/2:1,11,14:26:255,232,177,150,0,134	2/2:0,0,32:32:255,255,255,96,94,0
-chr21	29186698	chr21:29186698:M	TGTGTGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,40:42:255,105,0	0/1:21,14:36:162,0,255	1/1:1,30:32:255,73,0
-chr21	29192034	chr21:29192034:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:127,15,0	.	1/1:0,1:1:28,3,0
-chr21	29193716	chr21:29193716:M	TTTGTTTTTTTGTTTGTTTGTTTTTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,23:23:255,68,0	1/1:0,28:28:255,83,0
-chr21	29202815	chr21:29202815:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:31:255,87,0	1/1:1,31:35:255,74,0	1/1:0,29:31:255,89,0
-chr21	29209502	chr21:29209502:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:15:34,0,123	0/1:14,5:20:27,0,175	0/1:10,4:18:28,0,140
-chr21	29217750	chr21:29217750:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:10:139,12,0	1/1:0,10:13:182,33,0	1/1:1,12:16:223,29,0
-chr21	29220759	chr21:29220759:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,18:32:237,0,163	1/1:0,38:40:255,114,0	0/1:13,15:29:193,0,149
-chr21	29231552	chr21:29231552:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,14:25:186,0,131	0/1:6,7:13:85,0,67	0/1:11,16:28:209,0,126
-chr21	29240964	chr21:29240964:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0,0:10:0,29,174,29,174,174	0/2:6,2,4:12:32,33,143,0,51,85	0/1:3,3,0:6:34,0,34,50,43,117
-chr21	29281612	chr21:29281612:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,16:27:216,0,123	0/1:10,11:22:139,0,110	0/0:24,1:25:0,55,255
-chr21	29296050	chr21:29296050:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,7:18:255,103,70,190,0,141	1/2:0,4,4:8:154,55,43,66,0,44	2/2:0,1,7:8:131,106,103,23,6,0
-chr21	29306170	chr21:29306170:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,16,8:24:255,255,255,122,144,74,255,255,0,218	1/3:0,12,3,9:26:255,181,237,255,102,255,255,0,255,255	0/2:10,0,10,1:21:240,255,255,0,255,235,159,255,158,255
-chr21	29309258	chr21:29309258:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,2:23:0,32,255	0/1:8,11:21:136,0,85	0/0:19,1:22:0,46,255
-chr21	29324557	chr21:29324557:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,24:25:255,75,0	1/1:0,35:35:255,105,0	1/1:0,29:32:255,93,0
-chr21	29339630	chr21:29339630:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:119,20,0	1/1:2,8:13:136,3,0	1/1:1,8:11:146,14,0
-chr21	29344635	chr21:29344635:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<17.5>,<18.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,29,0,0:29:255,87,0,255,85,255,255,87,255,255	1/3:0,14,1,10:26:255,174,222,255,155,255,255,0,234,255	1/2:0,18,12,0:30:255,213,126,255,0,233,255,180,255,255
-chr21	29346278	chr21:29346278:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:44:255,129,0	1/1:1,37:39:255,97,0	1/1:1,62:63:255,167,0
-chr21	29358740	chr21:29358740:M	AGAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAA	<20.2>	.	.	Motif=AGAA	GT:AD:DP:PL	.	1/1:0,6:6:160,18,0	.
-chr21	29360846	chr21:29360846:M	AAAAAAAAAAAAAAAACAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:18:0,54,255	0/1:6,7:14:141,0,118	0/0:11,0:13:0,33,255
-chr21	29377731	chr21:29377731:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:43,0:45:0,131,255	0/1:24,35:60:255,0,255
-chr21	29380744	chr21:29380744:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<8.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:11,15,0:26:255,0,251,255,211,255	0/0:8,0,0:8:0,24,239,24,168,146	1/2:0,9,10:19:255,187,255,255,0,236
-chr21	29381778	chr21:29381778:M	TGTGTGTGCCTGTGTGTGTGTGTATGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:19,16:35:186,0,239	0/0:28,0:28:0,83,255
-chr21	29410941	chr21:29410941:M	TATATATATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,3:6:48,4,0	.	1/1:0,0:1:0,0,0
-chr21	29423027	chr21:29423027:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<13>	.	.	Motif=AG	GT:AD:DP:PL	0/0:26,0:28:0,78,255	0/1:16,10:28:192,0,255	0/0:42,1:44:0,102,255
-chr21	29431086	chr21:29431086:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,6,0:13:158,0,102,164,73,218	0/2:3,0,5:10:65,72,187,0,39,15	1/2:0,6,6:15:239,99,128,143,0,115
-chr21	29441829	chr21:29441829:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,46:47:255,120,0	0/1:23,23:47:255,0,255	0/1:25,25:51:255,0,255
-chr21	29443197	chr21:29443197:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,16:35:194,0,241	0/0:36,0:38:0,111,255	0/1:18,18:38:217,0,236
-chr21	29446397	chr21:29446397:M	AATTAATTAATTAATTAATTAATTAA	<5.5>	.	.	Motif=AATT	GT:AD:DP:PL	0/1:12,20:32:255,0,138	0/0:26,0:26:0,77,255	0/1:15,13:28:162,0,200
-chr21	29450360	chr21:29450360:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6:8:82,0,12	1/1:0,4:5:77,14,0	1/1:0,4:5:70,12,0
-chr21	29451825	chr21:29451825:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,18:33:255,0,219	0/0:21,0:24:0,63,255	0/1:12,19:33:255,0,240
-chr21	29454957	chr21:29454957:M	AAAAATAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,15:32:182,0,218	0/0:27,0:28:0,82,255	0/1:17,25:43:255,0,189
-chr21	29457518	chr21:29457518:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTCTC	<24.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:4,0:6:0,13,123	0/0:0,0:4:0,6,30	1/1:1,12:15:255,11,0
-chr21	29461527	chr21:29461527:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,24:47:255,0,255	0/0:40,0:40:0,118,255	0/1:32,21:54:234,0,255
-chr21	29461666	chr21:29461666:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	0/1:1,3:4:36,0,4	0/1:2,0:3:3,0,24
-chr21	29461842	chr21:29461842:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10:20:129,0,109	0/0:29,1:31:0,73,255	0/1:14,11:27:131,0,185
-chr21	29465939	chr21:29465939:M	TTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,8,3:17:178,2,40,119,0,196	0/2:10,0,5:20:111,132,255,0,247,255	0/1:9,12,0:25:252,0,215,255,255,255
-chr21	29469147	chr21:29469147:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:11:42,0,87	0/1:15,5:20:28,0,200	0/0:17,0:19:0,53,255
-chr21	29469791	chr21:29469791:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:4:25,0,8	0/0:4,0:5:0,14,79	0/1:2,5:8:77,0,10
-chr21	29474442	chr21:29474442:M	CGCGCGCGCGCGC	<5.5>	.	.	Motif=CG	GT:AD:DP:PL	1/1:0,5:5:65,14,0	0/1:1,2:4:14,0,12	1/1:0,1:1:13,3,0
-chr21	29474454	chr21:29474454:M	CACACACACACACACACACACACACACACCACA	<21.5>,<22.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,22:30:255,255,201,93,0,4	2/2:0,3,19:23:255,251,184,68,16,0	1/2:0,9,16:25:255,201,128,116,0,42
-chr21	29476701	chr21:29476701:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,1:2:12,0,5	1/1:1,4:6:63,0,0	1/1:1,9:10:140,12,0
-chr21	29477669	chr21:29477669:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:21:255,44,0	1/1:0,29:29:255,84,0	1/1:1,21:22:255,47,0
-chr21	29480269	chr21:29480269:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,49:49:255,145,0	1/1:0,43:43:255,127,0	1/1:1,49:50:255,129,0
-chr21	29482380	chr21:29482380:M	TTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,4:10:255,73,44,110,0,82	1/2:0,5,4:13:255,76,42,113,0,85	1/2:0,9,3:13:255,54,19,161,0,127
-chr21	29485336	chr21:29485336:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:220,27,0	1/1:0,11:13:255,36,0	1/1:0,13:15:255,39,0
-chr21	29497688	chr21:29497688:M	TATATATATATATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,44:47:255,141,0	1/1:0,45:45:255,135,0	1/1:0,52:56:255,165,0
-chr21	29505365	chr21:29505365:M	AAAAAGAAAAAAAAGAAAACAAACAAAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:0,18:18:255,53,0	1/1:0,26:26:255,77,0
-chr21	29505561	chr21:29505561:M	AAAAAAAAAAAAAAAAA	<23>,<24>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:5:145,18,3,71,0,57	1/2:0,1,3:6:129,63,49,18,0,4	1/2:0,0,2:3:66,35,26,11,0,4
-chr21	29519863	chr21:29519863:M	TATATATATATAAAATAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,7:9:230,24,0	1/1:0,0:2:35,6,0	1/1:0,0:1:1,0,0
-chr21	29540971	chr21:29540971:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:15:255,42,0	1/1:0,23:26:255,75,0	1/1:0,20:24:255,71,0
-chr21	29541576	chr21:29541576:M	TTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:18:255,53,0	1/1:0,8:9:255,27,0	1/1:0,11:14:255,39,0
-chr21	29542033	chr21:29542033:M	GTGTGTGTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,43:47:255,137,0	1/1:0,41:42:255,126,0	1/1:0,36:36:255,108,0
-chr21	29558346	chr21:29558346:M	ATATATATATATATATTTCATATATATAT	<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:21,14:35:60,0,136	0/1:8,21:29:149,0,9	0/1:20,19:39:103,0,113
-chr21	29558377	chr21:29558377:M	CACACACACACACACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,41:41:255,121,0	1/1:2,15:17:226,15,0	1/1:3,43:46:255,81,0
-chr21	29570844	chr21:29570844:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:27:255,32,0	1/1:1,22:28:255,50,0	1/1:5,30:35:255,12,0
-chr21	29574684	chr21:29574684:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:64,11,0	1/1:0,1:2:29,6,0	1/1:0,5:5:87,15,0
-chr21	29579956	chr21:29579956:M	TGTGTGTGTGT	<4.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,8:8:148,24,0	1/1:0,1:1:18,3,0	1/1:0,1:1:18,3,0
-chr21	29580488	chr21:29580488:M	TCTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,40:40:255,118,0	1/1:0,55:55:255,162,0
-chr21	29589425	chr21:29589425:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:9,20:29:255,0,72	0/0:15,2:18:0,16,249
-chr21	29591447	chr21:29591447:M	TCTTTTTCTTTTTC	<1.3>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:28,19:47:207,0,255	0/0:45,0:45:0,133,255
-chr21	29594180	chr21:29594180:M	TGTGTATGTGTGTGTGTGTGTGTGTGTATGTG	<14>	.	.	Motif=TG	GT:AD:DP:PL	0/0:30,0:33:0,90,255	0/1:12,16:32:255,0,238	0/0:27,0:28:0,81,255
-chr21	29595341	chr21:29595341:M	TTTTTTTTTTTTTTTTTCTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,4:16:25,0,170	0/1:13,4:17:19,0,173	0/0:18,1:21:0,43,255
-chr21	29606019	chr21:29606019:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:25:0,56,255	0/1:11,10:21:109,0,126	0/0:23,1:25:0,55,255
-chr21	29606665	chr21:29606665:M	AAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAACAAAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/1:8,17:26:255,0,142	0/0:21,0:22:0,66,255
-chr21	29606794	chr21:29606794:M	TCTTGTCTTGTCTTGTCTTGTCTTGT	<4.2>	.	.	Motif=TCTTG	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:17,12:29:133,0,224	0/0:37,0:37:0,109,255
-chr21	29619124	chr21:29619124:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,0,0:7:0,21,196,21,143,124	0/2:5,0,5:11:52,70,205,0,93,65	0/1:7,3,0:11:52,0,173,51,127,152
-chr21	29629195	chr21:29629195:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:28:0,80,255	0/1:7,7:16:71,0,91	0/1:8,17:27:213,0,79
-chr21	29632513	chr21:29632513:M	ACACACACACACACACACACACAC	<7>	.	.	Motif=AC	GT:AD:DP:PL	0/0:39,0:40:0,120,255	0/1:13,15:29:255,0,255	0/0:35,0:36:0,108,255
-chr21	29640162	chr21:29640162:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:18,20:39:250,0,205	0/0:40,0:41:0,120,255
-chr21	29654602	chr21:29654602:M	AAAGAAAGAAGGAAAGAAAGAAAGAAAGAGAAAGAAAGAAAGAAAAAAAG	<13.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:10,9:19:96,0,112	0/0:23,0:24:0,70,255
-chr21	29695437	chr21:29695437:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<9.2>,<10.2>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,20,0:31:255,91,0,255,85,255	0/1:5,11,0:16:188,0,57,130,42,135	1/2:0,18,14:39:255,116,75,255,0,175
-chr21	29695477	chr21:29695477:M	TATATATATATAT	<4.5>,<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,16,15:32:255,255,255,255,0,255	1/2:0,8,7:18:255,177,219,174,0,255	1/2:7,8,23:39:255,255,255,23,0,255
-chr21	29707425	chr21:29707425:M	TCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC	<7.5>,<33.8>	.	.	Motif=TCCC	GT:AD:DP:PL	2/2:0,0,3:3:38,38,38,8,8,0	1/2:0,3,4:7:116,39,30,77,0,66	2/2:0,0,3:3:38,38,38,8,8,0
-chr21	29712084	chr21:29712084:M	ACACACACACACACACACACACACACACACACACACACACA	<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,10,9:21:255,169,145,188,0,162	1/1:0,17,1:22:255,59,0,255,33,255	2/2:0,1,12:18:255,255,255,44,10,0
-chr21	29719075	chr21:29719075:M	TATATACATATATATATATATATATAT	<11.5>,<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,12,15:27:255,255,255,255,0,255	1/1:0,8,0:8:189,24,0,203,24,226	2/2:0,0,25:27:255,255,255,80,81,0
-chr21	29725008	chr21:29725008:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,4:15:26,0,149	0/1:9,4:14:36,0,110	0/1:12,6:19:58,0,150
-chr21	29734346	chr21:29734346:M	CTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<9>,<11>,<12>	.	.	Motif=CTTTT	GT:AD:DP:PL	1/2:0,11,11,0:22:255,255,255,255,0,255,255,208,255,255	1/3:0,13,0,7:20:255,187,148,255,125,255,255,0,255,255	2/3:0,0,11,6:17:255,255,255,112,112,63,204,204,0,156
-chr21	29735847	chr21:29735847:M	AAAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6:11:227,106,96,48,0,22	2/2:0,2,11:14:255,188,152,39,3,0	1/2:0,3,13:19:255,225,196,56,0,8
-chr21	29736205	chr21:29736205:M	ATTATGATTATGATTATGATTATGATTAT	<3.8>	.	.	Motif=ATTATG	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,40:41:255,120,0	1/1:0,38:38:255,112,0
-chr21	29750217	chr21:29750217:M	CTCCCTCCCTTCCTTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTC	<13>,<16.2>	.	.	Motif=CTCC	GT:AD:DP:PL	1/2:0,3,7:14:202,171,164,39,0,61	1/2:0,2,3:6:92,72,68,25,0,46	1/2:0,6,10:20:255,246,230,78,0,130
-chr21	29765858	chr21:29765858:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:34:0,102,255	0/1:13,12:26:255,0,255	0/0:40,0:40:0,120,255
-chr21	29767865	chr21:29767865:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19,1:20:255,60,0,255,40,255	1/2:0,19,13:33:255,247,149,255,0,237	1/1:0,23,0:23:255,69,0,255,68,255
-chr21	29774447	chr21:29774447:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,5:9:133,58,79,35,0,28	1/2:1,4,3:8:131,26,39,51,0,46	0/2:2,0,6:10:81,80,144,0,38,22
-chr21	29775276	chr21:29775276:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:7:0,3,81	0/1:2,3:5:35,0,18	0/0:4,0:6:0,11,68
-chr21	29779336	chr21:29779336:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGCACGTGTGTGTGTG	<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,24:27:255,71,0	1/1:0,17:25:255,59,0	1/1:0,25:29:255,75,0
-chr21	29779495	chr21:29779495:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,38:39:255,115,0	0/1:12,17:33:248,0,119	1/1:1,41:43:255,108,0
-chr21	29782087	chr21:29782087:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,0:18:0,52,255	0/0:12,1:13:0,21,189	0/1:11,4:16:33,0,149
-chr21	29785562	chr21:29785562:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,1:6:0,1,68	1/1:0,5:6:92,17,0	0/0:4,0:5:0,14,76
-chr21	29796976	chr21:29796976:M	AAAAAAAAAAAAGAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,38:39:255,96,0	1/1:1,32:33:255,79,0	1/1:1,37:39:255,96,0
-chr21	29799497	chr21:29799497:M	TTTGTTTGTTTGTTTGTTTTCATTTGTTTTTTGTTTGTTTGTTTGTTTTTTG	<12>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,19:20:255,59,0	0/1:14,12:26:140,0,177	1/1:0,21:21:255,62,0
-chr21	29810297	chr21:29810297:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28,1:29:255,84,0,255,67,255	1/2:0,20,15:36:255,223,160,255,0,255	1/1:0,39,0:39:255,117,0,255,115,255
-chr21	29813914	chr21:29813914:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,89	0/1:9,8:18:93,0,101	0/0:12,0:12:0,35,210
-chr21	29814091	chr21:29814091:M	ATAAAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=ATA	GT:AD:DP:PL	0/0:19,1:21:0,37,226	0/1:11,5:17:25,0,96	0/1:12,4:18:18,0,106
-chr21	29821058	chr21:29821058:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11:24:132,0,169	0/1:20,11:34:105,0,255	1/1:1,22:26:255,47,0
-chr21	29827976	chr21:29827976:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,11:23:202,0,167	0/1:13,11:25:183,0,224	0/0:21,0:25:0,74,255
-chr21	29828012	chr21:29828012:M	TGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,9:27:51,0,141	0/1:15,9:25:54,0,120	0/0:31,0:32:0,89,255
-chr21	29830308	chr21:29830308:M	CACACACACACACACACACACACACACACACACACACACACACACACACACACACTCACACACA	<28>,<30>,<31>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,9,1,6:17:255,116,162,255,89,255,255,0,255,255	1/3:0,2,0,5:7:139,85,144,133,85,130,68,0,62,53	2/3:0,0,6,4:10:229,241,255,59,71,41,105,105,0,76
-chr21	29839041	chr21:29839041:M	TTTCTTTTCTTTTCTTTTCTTTTTTTT	<6.4>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:16,25:41:255,0,187	0/1:18,7:25:53,0,252	0/0:32,0:32:0,94,255
-chr21	29847930	chr21:29847930:M	CACACACACACA	<8>	.	.	Motif=CA	GT:AD:DP:PL	0/1:19,17:41:255,0,255	0/0:23,1:24:0,48,255	0/1:22,14:38:250,0,255
-chr21	29848049	chr21:29848049:M	TTATTATTATTATTATTATTA	<8>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:16,13:29:166,0,224	0/0:30,0:30:0,88,255	0/1:17,10:27:109,0,241
-chr21	29848756	chr21:29848756:M	TATATATATATATATATATATATAT	<15.5>,<16.5>	.	.	Motif=TA	GT:AD:DP:PL	0/2:7,1,5:14:101,37,164,0,130,133	1/1:0,1,0:1:26,3,0,13,3,11	0/1:7,4,0:11:67,0,154,42,168,202
-chr21	29848780	chr21:29848780:M	TTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,5:14:255,154,132,140,0,115	1/2:0,3,0:6:103,18,6,79,0,76	1/2:0,1,3:7:146,99,89,40,0,26
-chr21	29851057	chr21:29851057:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,14:37:166,0,255	0/0:22,3:28:0,17,255	0/1:17,17:36:228,0,206
-chr21	29859378	chr21:29859378:M	ATAAAATAAAATGAAATAAAAAAACAAAAAAAAATAAA	<7.8>	.	.	Motif=ATAAA	GT:AD:DP:PL	0/1:11,15:26:82,0,42	0/0:12,0:14:0,35,129	0/1:16,13:30:52,0,90
-chr21	29861308	chr21:29861308:M	TCTTTTTTTTTCTTTT	<3.4>	.	.	Motif=TCTTT	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,30:30:255,90,0	1/1:0,34:34:255,102,0
-chr21	29868026	chr21:29868026:M	AAGGAAGGAAGGAAGGAAGGAAGGGAAGGA	<5.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/0:40,0:40:0,120,255	0/1:22,21:43:255,0,255
-chr21	29871761	chr21:29871761:M	TTTTTTTTTTTTTTTTTTTTT	<22>,<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3,0:10:153,41,25,77,0,79,145,44,104,199	2/3:0,0,4,4:8:210,169,156,66,66,43,66,55,0,43	0/1:3,5,1,0:9:70,0,25,54,34,129,84,49,147,204
-chr21	29872193	chr21:29872193:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:9:64,0,46	1/1:2,8:12:122,0,0	0/0:6,0:6:0,18,106
-chr21	29875002	chr21:29875002:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,30:34:255,45,0	1/1:0,30:33:255,96,0	1/1:1,34:38:255,71,0
-chr21	29876113	chr21:29876113:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,19,11:31:255,193,106,255,0,255	2/2:0,2,25:27:255,255,255,80,45,0	1/2:0,9,8:17:255,139,90,157,0,109
-chr21	29888133	chr21:29888133:M	CCCTCCCTCCCTCCCTCCCTCC	<33.8>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:11,4:15:5,0,255	0/1:11,4:15:4,0,253	0/0:14,4:18:0,5,255
-chr21	29900084	chr21:29900084:M	AAAAAAAAAAAAAAAAGAAAATAAAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,16:20:255,22,0	1/1:0,21:24:255,69,0	1/1:1,17:22:255,43,0
-chr21	29926106	chr21:29926106:M	AAAAAAAAAAAAAAAA	<13>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,16,10:27:255,162,219,255,0,255	1/2:2,25,12:40:255,172,255,255,0,255	1/1:0,42,0:46:255,135,0,255,135,255
-chr21	29937798	chr21:29937798:M	TTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,15:35:255,255,255,255,0,255	1/2:0,18,26:48:255,255,255,255,0,255	2/2:0,0,23:25:255,255,255,75,75,0
-chr21	29944864	chr21:29944864:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAGAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,12:15:183,9,0	1/1:1,20:21:255,45,0	1/1:4,19:25:255,5,0
-chr21	29948120	chr21:29948120:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:42:255,123,0	1/1:1,28:29:255,68,0	1/1:1,35:36:255,88,0
-chr21	29953362	chr21:29953362:M	AAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:7:114,20,0	0/1:3,4:7:45,0,29	1/1:0,5:7:86,11,0
-chr21	29954739	chr21:29954739:M	TGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:1,0,21:22:255,255,255,46,63,0	2/2:2,0,30:32:255,255,255,59,90,0	1/2:0,15,10:25:255,178,210,255,0,255
-chr21	29962870	chr21:29962870:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:10:39,0,61	0/1:2,3:6:34,0,18	0/1:3,5:13:60,0,47
-chr21	29969361	chr21:29969361:M	ATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<9.5>	.	.	Motif=ATAA	GT:AD:DP:PL	0/1:13,12:25:158,0,177	0/1:6,11:17:149,0,59	0/1:8,12:21:173,0,89
-chr21	29971487	chr21:29971487:M	ATCATCATCAT	<2.7>	.	.	Motif=ATC	GT:AD:DP:PL	1/1:0,47:47:255,139,0	1/1:0,55:55:255,162,0	1/1:0,46:46:255,136,0
-chr21	29978464	chr21:29978464:M	ATATATATATATATATATA	<12.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,14,0:18:255,36,0,255,53,255	1/1:0,6,0:8:229,24,0,225,24,223	1/2:0,8,3:12:255,104,77,255,0,255
-chr21	29990798	chr21:29990798:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,56:56:255,166,0	1/1:1,42:43:255,109,0	1/1:1,39:40:255,99,0
-chr21	30000683	chr21:30000683:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,89,0	1/1:1,35:37:255,91,0	1/1:2,29:31:255,55,0
-chr21	30006879	chr21:30006879:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:49,1:53:0,137,255	0/0:39,0:40:0,117,255	0/1:10,19:31:255,0,103
-chr21	30008818	chr21:30008818:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:88,15,0	1/1:0,4:5:56,3,0	1/1:1,5:6:69,0,0
-chr21	30009965	chr21:30009965:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,3:38:0,47,255	0/0:31,1:33:0,79,255	0/1:13,14:28:178,0,150
-chr21	30010152	chr21:30010152:M	AAAAAAAAAAAAAAAAAGAAAAAGAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,22:24:255,71,0	1/1:0,29:34:255,95,0	1/1:0,16:17:255,48,0
-chr21	30017215	chr21:30017215:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:45,0,18	0/1:1,1:3:8,0,20	0/1:2,8:10:108,0,5
-chr21	30020817	chr21:30020817:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:36:255,103,0	1/1:0,21:22:255,64,0	1/1:0,44:45:255,132,0
-chr21	30032208	chr21:30032208:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:1,22:24:255,43,0	1/1:3,29:32:255,40,0
-chr21	30037106	chr21:30037106:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:34:255,96,0	1/1:0,26:29:255,83,0	1/1:0,41:45:255,128,0
-chr21	30038266	chr21:30038266:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,1,2:4:65,16,34,0,10,18	1/2:0,3,1:5:120,16,1,57,0,44	0/2:1,1,4:7:124,57,67,0,9,8
-chr21	30045691	chr21:30045691:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:0,40:41:255,120,0	1/1:0,42:44:255,129,0
-chr21	30046812	chr21:30046812:M	TGTGTATGGGTATGTATGTGTATGTGTATGTGTATGTGTATGTGTATGTGT	<9.5>,<10.5>	.	.	Motif=TGTGTA	GT:AD:DP:PL	1/1:0,20,0:20:255,59,0,255,59,255	1/2:0,7,7:14:255,126,86,107,0,86	1/1:0,23,1:24:255,71,0,255,52,255
-chr21	30058533	chr21:30058533:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:15,0:16:0,46,255	0/0:19,3:27:0,6,255	0/1:13,7:23:56,0,187
-chr21	30062279	chr21:30062279:M	AAAAATAAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAA	<62>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:15:159,0,188	0/1:5,3:8:64,0,122	0/0:7,0:8:0,21,204
-chr21	30088691	chr21:30088691:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:30:0,87,255	0/0:31,0:34:0,96,255	0/1:13,10:25:105,0,179
-chr21	30103334	chr21:30103334:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,3:30:0,26,255	0/1:21,10:33:88,0,255	0/0:40,1:43:0,108,255
-chr21	30106442	chr21:30106442:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:86,19,0	1/1:0,3:3:38,8,0	0/1:1,1:4:23,0,2
-chr21	30128143	chr21:30128143:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,1:14:0,2,156	0/1:5,3:10:42,0,56	0/0:6,1:8:0,6,97
-chr21	30174970	chr21:30174970:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:28:255,27,0	1/1:5,28:36:255,20,0	1/1:3,27:31:255,38,0
-chr21	30191980	chr21:30191980:M	TCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTTGCTCTCTCTCTTTCTCCTCTC	<32>	.	.	Motif=TC	GT:AD:DP:PL	0/1:10,8:20:172,0,215	0/1:10,5:15:91,0,227	0/1:8,7:16:149,0,175
-chr21	30205795	chr21:30205795:M	TTTTTCTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,10:21:128,0,119	0/1:10,12:23:148,0,103	0/1:10,12:25:157,0,114
-chr21	30217900	chr21:30217900:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<29>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7,0:8:106,6,0,128,24,219	1/2:0,3,3:8:139,90,78,58,0,75	1/1:0,4,0:6:93,17,0,104,17,138
-chr21	30219685	chr21:30219685:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,32,186	0/1:5,9:14:112,0,44	0/0:17,0:19:0,53,255
-chr21	30226492	chr21:30226492:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:3:81,9,0	.
-chr21	30231682	chr21:30231682:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,2:43:0,89,255	0/1:15,18:33:224,0,171	0/0:25,1:26:0,58,255
-chr21	30235160	chr21:30235160:M	TTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,0:41:0,121,255	0/0:30,0:37:0,108,255	0/1:10,13:26:255,0,218
-chr21	30237551	chr21:30237551:M	TTTCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTCT	<12>,<12.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/0:13,0,0:13:0,39,255,39,255,254	0/1:6,5,0:11:113,0,144,131,108,223	0/2:3,0,9:13:132,168,255,0,66,31
-chr21	30241248	chr21:30241248:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:21,17:38:255,0,255	0/0:35,0:35:0,105,255
-chr21	30254274	chr21:30254274:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:20:0,57,255	0/1:14,15:33:255,0,255	0/0:17,0:21:0,53,255
-chr21	30268072	chr21:30268072:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:6:71,0,0	0/1:2,6:9:77,0,10	1/1:0,2:2:34,6,0
-chr21	30271040	chr21:30271040:M	AAACAAAACAAAAACAACAACAACAACAAAAAAAAA	<5.8>	.	.	Motif=AAACAA	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:13,20:33:255,0,180	0/0:32,0:32:0,95,255
-chr21	30279336	chr21:30279336:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,54:54:255,255,255,160,160,0	1/2:0,28,33:61:255,255,255,255,0,255	2/2:0,1,52:53:255,255,255,156,138,0
-chr21	30279861	chr21:30279861:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,4:16:18,0,148	0/1:9,2:13:8,0,106	0/0:15,2:17:0,17,208
-chr21	30280874	chr21:30280874:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:19:0,19,253	0/1:15,8:25:85,0,184	0/0:21,0:25:0,69,255
-chr21	30292509	chr21:30292509:M	AAAAAAATAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/1:14,19:33:240,0,152	0/0:36,1:37:0,91,255
-chr21	30297067	chr21:30297067:M	TGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGCGTGTGTGTGTGT	<31.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:3,6:9:78,0,26	0/0:14,0:14:0,41,252
-chr21	30304472	chr21:30304472:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:15:0,44,254	0/1:11,9:22:89,0,133	0/0:11,0:13:0,35,199
-chr21	30313592	chr21:30313592:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:157,15,0	0/1:11,8:20:75,0,135	1/1:0,15:15:255,44,0
-chr21	30322393	chr21:30322393:M	GTGTGTGTGTG	<7.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:15,0:17:0,51,255	0/1:4,8:13:146,0,66	0/0:13,0:13:0,39,255
-chr21	30322403	chr21:30322403:M	GGGGGGGGGGGGGCGGTGGGGGGG	<23>,<25>	.	.	Motif=G	GT:AD:DP:PL	0/2:4,0,5:9:44,69,152,0,45,30	1/2:0,7,3:11:105,38,41,92,0,140	1/2:0,1,3:5:43,40,62,13,0,12
-chr21	30333520	chr21:30333520:M	AAAAAAAAAAAAAAAAAAGAAAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,20,197	1/1:0,6:7:103,18,0	0/0:8,0:10:0,26,149
-chr21	30334488	chr21:30334488:M	ATAGATAGATAGATGATAGATGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<15.5>,<15.8>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:5,14,0:19:255,0,87,190,127,255	1/2:0,11,7:18:255,98,45,152,0,100	0/1:8,10,0:18:230,0,174,135,205,255
-chr21	30334616	chr21:30334616:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0:23:0,69,255	0/1:10,6:17:131,0,249	0/0:25,0:27:0,81,255
-chr21	30337984	chr21:30337984:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:35:0,79,255	0/1:14,7:22:58,0,178	0/0:36,0:39:0,113,255
-chr21	30341737	chr21:30341737:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:35:122,0,255	1/1:4,21:26:255,7,0	0/1:23,7:31:33,0,255
-chr21	30346402	chr21:30346402:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/1:13,12:25:140,0,157	0/0:23,0:23:0,68,255
-chr21	30347297	chr21:30347297:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,2:39:0,77,255	0/1:22,16:42:179,0,255	0/0:40,0:44:0,128,255
-chr21	30351716	chr21:30351716:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTTTA	<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:17,0:18:0,50,255	0/1:8,9:17:114,0,95	0/0:22,0:22:0,65,255
-chr21	30356359	chr21:30356359:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:33:0,96,255	0/1:23,15:38:147,0,255	0/0:34,0:34:0,100,255
-chr21	30362723	chr21:30362723:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,15:27:209,0,125	1/1:1,29:32:255,76,0	0/1:14,19:34:246,0,163
-chr21	30367276	chr21:30367276:M	TTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:31:0,92,255	0/1:8,12:22:255,0,166	0/0:22,0:24:0,71,255
-chr21	30367585	chr21:30367585:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:0,41:41:255,121,0	1/1:0,26:26:255,77,0
-chr21	30388523	chr21:30388523:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,30:31:255,73,0	1/1:1,40:41:255,102,0
-chr21	30388644	chr21:30388644:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,12:15:255,42,0	1/1:0,15:16:255,48,0
-chr21	30390184	chr21:30390184:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:95,6,0	1/1:0,2:2:33,6,0	0/1:0,1:3:19,0,3
-chr21	30393447	chr21:30393447:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,66,0	1/1:1,30:39:255,74,0	1/1:0,34:38:255,102,0
-chr21	30394202	chr21:30394202:M	TTTTTTTTTTTTTTTTTTTTTTTT	<18>,<25>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:32,38,59,6,6,0	0/2:3,0,3:6:29,46,153,0,47,29	1/2:0,5,2:9:181,31,31,155,0,149
-chr21	30394756	chr21:30394756:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,43:44:255,129,0	1/1:1,41:43:255,108,0
-chr21	30403976	chr21:30403976:M	TTTTTCGTTTTCTTTTTCTTTTTTTTT	<4.7>	.	.	Motif=TTTTTC	GT:AD:DP:PL	1/1:0,37:37:255,111,0	1/1:0,30:30:255,90,0	1/1:0,20:20:255,60,0
-chr21	30404948	chr21:30404948:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:8:95,5,0	1/1:0,6:6:102,18,0	1/1:0,8:8:140,23,0
-chr21	30405493	chr21:30405493:M	TTTATTTTTATTATTTATTTTTATTTTTTATTTTTATTTTT	<4.7>	.	.	Motif=TTTATT	GT:AD:DP:PL	1/1:0,32:32:255,96,0	1/1:0,27:27:255,81,0	1/1:0,36:36:255,108,0
-chr21	30410757	chr21:30410757:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,11:13:191,20,0	1/1:0,5:7:108,20,0	1/1:1,19:22:255,44,0
-chr21	30411772	chr21:30411772:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:25:148,0,139	0/0:28,2:32:0,54,255	0/1:14,14:29:157,0,172
-chr21	30420803	chr21:30420803:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:10:4,0,107	0/1:3,3:6:31,0,32	0/1:5,7:13:79,0,55
-chr21	30449424	chr21:30449424:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<25>	.	.	Motif=CT	GT:AD:DP:PL	0/0:5,0:8:0,20,109	0/0:1,0:1:0,3,17	0/1:1,5:8:64,0,7
-chr21	30452826	chr21:30452826:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:32:255,56,0	0/1:15,20:39:152,0,88	1/1:1,42:51:255,51,0
-chr21	30461491	chr21:30461491:M	AAAAAAAAAAAAAAA	<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,11:14:255,255,255,41,41,0	1/2:1,11,5:17:255,109,91,168,0,255	2/2:0,0,12:13:255,255,255,39,39,0
-chr21	30466481	chr21:30466481:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<20.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:2,0,9,11:22:255,255,255,255,255,255,122,255,0,246	1/3:0,16,0,7:24:255,195,144,255,195,255,255,0,255,255	2/3:2,0,5,7:14:224,244,255,158,193,172,51,159,0,138
-chr21	30482218	chr21:30482218:M	TTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,17,19:38:255,255,255,252,0,218	0/2:22,1,11:36:224,182,255,0,255,255	0/1:9,36,0:46:255,0,40,255,170,255
-chr21	30483959	chr21:30483959:M	TATATATATATATATGTATA	<11>	.	.	Motif=TA	GT:AD:DP:PL	0/0:16,0:16:0,46,255	0/1:5,12:17:138,0,29	0/0:28,0:28:0,81,255
-chr21	30483978	chr21:30483978:M	AGAGAGAGAGAGAGAGAGA	<12.5>,<14.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,15,13:30:255,255,255,255,0,255	0/2:13,1,9:24:195,201,255,0,255,255	1/2:0,13,9:23:255,242,195,255,0,255
-chr21	30489116	chr21:30489116:M	ACACATACACACACACACACACACACACACAC	<17>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:13,12:26:139,0,156	1/1:0,25:25:255,74,0
-chr21	30492859	chr21:30492859:M	TTTTCTTTTCTTTTTTTTTTTTTTT	<23>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25,0:25:255,75,0,255,74,255	1/2:0,13,14:28:255,208,167,238,0,161	1/1:0,26,2:28:255,78,0,255,46,255
-chr21	30494709	chr21:30494709:M	AAAAAAAAAAAAAAGAAAAAAAAAAGAAAAGAAAAGAAAA	<35>,<39>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6,0:6:172,18,0,172,18,172	1/2:2,9,6:17:255,67,140,194,0,204	1/1:0,9,0:10:255,30,0,255,30,255
-chr21	30498212	chr21:30498212:M	GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,16,0:18:255,51,0,255,51,255	1/2:0,8,9:19:255,232,198,219,0,184	1/1:0,23,0:23:255,69,0,255,69,255
-chr21	30507160	chr21:30507160:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,49:50:255,129,0	0/1:23,27:52:255,0,255	1/1:0,42:42:255,124,0
-chr21	30522235	chr21:30522235:M	ATATATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:12,1:13:0,23,140	0/0:8,1:9:0,12,87	0/1:7,6:13:40,0,52
-chr21	30522251	chr21:30522251:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:104,12,0	0/1:4,2:6:33,0,85	0/1:1,7:8:154,0,2
-chr21	30522265	chr21:30522265:M	ATATATATATATATACATATATATATATA	<17.5>,<18.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,9,12:23:255,166,98,111,0,42	1/2:0,1,2:3:105,24,15,12,0,3	1/2:0,8,6:18:255,113,63,97,0,44
-chr21	30524108	chr21:30524108:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,97,0	0/1:19,23:42:255,0,214	1/1:1,43:44:255,111,0
-chr21	30524233	chr21:30524233:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:4,22:27:255,9,0	1/1:3,33:38:255,47,0
-chr21	30533037	chr21:30533037:M	GTTTTGTTTTTGTTTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<12.2>,<13.2>	.	.	Motif=GTTTT	GT:AD:DP:PL	1/2:0,5,6:11:238,114,84,83,0,65	0/2:9,0,6:16:128,107,230,0,162,215	1/1:0,9,0:9:171,27,0,171,27,171
-chr21	30552729	chr21:30552729:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<29.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:7:32,0,49	0/1:6,3:10:21,0,81	0/1:3,5:9:60,0,35
-chr21	30558067	chr21:30558067:M	TTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:70,12,0	0/1:2,7:10:91,0,7	1/1:0,6:6:102,18,0
-chr21	30562374	chr21:30562374:M	TATATATATATATATATGTATATATATATATATACATGTATGTATGTATATATA	<33.8>	.	.	Motif=TATA	GT:AD:DP:PL	1/1:0,3:7:44,9,0	.	0/0:0,0:2:0,0,0
-chr21	30576984	chr21:30576984:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,40:40:255,118,0	1/1:0,40:40:255,118,0
-chr21	30621612	chr21:30621612:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:30:255,60,0	1/1:3,23:28:255,30,0	0/1:8,26:35:255,0,40
-chr21	30623886	chr21:30623886:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:8:213,24,0	1/1:0,7:9:220,27,0	1/1:0,2:3:67,9,0
-chr21	30626625	chr21:30626625:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:31:255,54,0	1/1:2,26:29:255,50,0	1/1:0,22:23:255,67,0
-chr21	30632675	chr21:30632675:M	AAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:69,9,0	1/1:0,5:6:157,18,0	1/1:0,1:1:29,3,0
-chr21	30650305	chr21:30650305:M	TTTTTTTTTCTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:242,27,0	1/1:0,12:12:255,36,0	1/1:0,13:14:255,39,0
-chr21	30656424	chr21:30656424:M	AAAAAAAAAAAAAAAAAGAAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:17:255,49,0	1/1:1,14:16:221,27,0	1/1:0,20:20:255,59,0
-chr21	30683970	chr21:30683970:M	AAAAAAAAAAGAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,2:23:0,3,255	1/1:0,6:7:158,18,0	0/1:13,4:17:57,0,255
-chr21	30690894	chr21:30690894:M	AAAAAAAAATGAAAAGAAAAGAAAA	<4.8>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:20,19:39:255,0,255	1/1:0,36:36:255,108,0	0/1:18,20:38:255,0,255
-chr21	30695589	chr21:30695589:M	CAAACAAACAAACAAACAAAC	<6.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:20,23:43:255,0,255	1/1:1,32:33:255,79,0	0/1:14,15:29:197,0,178
-chr21	30701769	chr21:30701769:M	TGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGT	<21.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,9,0:19:200,0,227,163,255,255	1/2:0,9,6:15:255,104,61,156,0,114	0/1:20,7,0:30:116,0,255,130,255,255
-chr21	30705468	chr21:30705468:M	GTTTTTTGTTTGTTTTTTGTTTGTTT	<5.5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:19,19:38:226,0,226	1/1:0,40:40:255,117,0	0/1:22,18:42:196,0,255
-chr21	30707314	chr21:30707314:M	AAAACAAAACAAAACAAA	<4.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:17,21:38:255,0,217	1/1:0,39:39:255,115,0	0/1:16,15:31:191,0,210
-chr21	30713016	chr21:30713016:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:23:255,0,182	1/1:0,34:35:255,105,0	0/1:9,15:25:255,0,166
-chr21	30715751	chr21:30715751:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,1:7:0,2,80	1/1:0,7:7:118,20,0	0/1:3,1:4:5,0,40
-chr21	30716787	chr21:30716787:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,20,177	0/1:9,3:14:10,0,130	0/1:8,3:11:20,0,106
-chr21	30717762	chr21:30717762:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,9,0:23:196,0,255,163,255,255	1/2:0,12,11:23:255,191,125,208,0,142	0/1:9,13,0:25:255,0,207,244,250,255
-chr21	30725133	chr21:30725133:M	ACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:20,0:24:0,63,255	0/1:14,11:38:203,0,255	0/0:28,0:28:0,84,255
-chr21	30727925	chr21:30727925:M	AAGAAGAAAAGAGAGAAGAAG	<6.3>	.	.	Motif=AAG	GT:AD:DP:PL	0/1:21,20:41:255,0,255	1/1:0,40:40:255,120,0	0/1:17,23:40:255,0,255
-chr21	30731863	chr21:30731863:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,23:47:255,0,255	1/1:0,49:49:255,144,0	0/1:25,31:56:255,0,255
-chr21	30752614	chr21:30752614:M	ACACACACACACACACACACACACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:9,0:10:0,30,255	0/1:11,6:22:108,0,255	0/0:7,0:9:0,26,228
-chr21	30755257	chr21:30755257:M	CCACAGCCATACCCACAGCCATAGCCAGTTCCATAGCCACAGCCACAGCCAGAGCCAGAGCCATAGCCACAGCCACAGCCGGAGCCATAGCCACAG	<14>	.	.	Motif=CCACAG	GT:AD:DP:PL	1/1:0,4:4:101,12,0	1/1:0,1:1:25,3,0	1/1:0,5:5:125,15,0
-chr21	30763383	chr21:30763383:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:27:127,136,255,0,218,169	0/1:8,16,1:27:255,0,186,255,131,255	0/2:6,2,8:17:119,67,222,0,55,55
-chr21	30767367	chr21:30767367:M	ACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:2,16:18:254,17,0	1/1:2,23:25:255,39,0	1/1:2,16:18:248,17,0
-chr21	30768842	chr21:30768842:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,21:27:255,39,0	1/1:1,18:21:255,44,0	1/1:2,16:19:252,20,0
-chr21	30799212	chr21:30799212:M	AAAAAAAAAAAAAAAAAAAAGAATAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:6:110,15,0	1/1:0,1:2:27,3,0	1/1:0,2:3:55,6,0
-chr21	30800786	chr21:30800786:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,7:7:127,21,0	1/1:0,19:19:255,56,0
-chr21	30803046	chr21:30803046:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,63,0	1/1:0,17:17:255,51,0	1/1:0,10:14:255,33,0
-chr21	30805071	chr21:30805071:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,11:14:173,4,0	1/1:2,15:18:235,17,0	1/1:0,13:13:233,38,0
-chr21	30806882	chr21:30806882:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,12:34:125,0,255	1/1:2,26:29:255,50,0	0/1:24,11:36:95,0,255
-chr21	30807296	chr21:30807296:M	AAAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,5,39:44:255,255,255,131,39,0	1/2:0,17,17:36:255,255,210,255,0,188	2/2:0,2,33:36:255,255,255,105,59,0
-chr21	30813491	chr21:30813491:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:169,0,226	0/1:20,17:37:191,0,244	0/1:15,15:30:185,0,185
-chr21	30816279	chr21:30816279:M	CACACACACACACACACACACACACACACACACACACACACACACACA	<21>,<22>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,5,4,0:11:248,64,33,99,0,71,210,53,98,195	1/3:0,9,0,5:17:255,76,88,210,74,183,236,0,146,213	2/2:0,2,17,1:20:255,255,249,57,26,0,255,230,42,255
-chr21	30818841	chr21:30818841:M	AAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20,1:44:255,0,255,255,255,255	0/2:19,0,14:36:255,243,255,0,255,255	0/1:21,6,2:31:99,0,255,70,255,255
-chr21	30820551	chr21:30820551:M	TGGTGGTGGTGCTGGTGGTGATGGTGGTGGTGTTGGT	<13.3>	.	.	Motif=TGG	GT:AD:DP:PL	0/1:11,24:35:184,0,33	0/1:10,13:23:86,0,52	0/1:10,9:19:52,0,64
-chr21	30821072	chr21:30821072:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,27:46:255,0,206	0/1:16,18:34:223,0,187	0/1:23,17:41:195,0,255
-chr21	30824991	chr21:30824991:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,8:20:255,145,169,218,0,255	1/2:2,11,6:20:221,73,116,168,0,255	1/2:0,11,7:19:255,131,152,195,0,255
-chr21	30826652	chr21:30826652:M	GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACAGACAGATAGATGATAGATACATAGATACATACATAGGTAGATAGATGATAGA	<16.8>,<17.8>	.	.	Motif=GATA	GT:AD:DP:PL	1/2:0,1,1:3:72,12,3,18,0,10	1/1:0,3,0:4:113,9,0,39,7,29	1/2:0,1,3:6:152,33,16,27,0,11
-chr21	30834204	chr21:30834204:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<10.2>	.	.	Motif=TGTT	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,21:21:255,63,0	1/1:0,15:15:255,45,0
-chr21	30835514	chr21:30835514:M	GAATGAATGAATGAATGAATGAATGAATGAAATGAATGAAT	<12.2>,<13.2>	.	.	Motif=GAAT	GT:AD:DP:PL	1/2:0,11,11:22:255,211,150,211,0,149	1/2:0,9,13:22:255,235,173,163,0,100	2/2:0,0,21:21:255,255,255,63,62,0
-chr21	30841846	chr21:30841846:M	AAAAAAAAAAAAAAAAATTAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:12:182,0,1	1/1:0,1:3:27,3,0	1/1:0,3:7:82,9,0
-chr21	30841882	chr21:30841882:M	AACAACAACAACAACAA	<7.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,20:23:255,30,0	1/1:0,7:8:176,5,0	1/1:1,17:19:255,30,0
-chr21	30842198	chr21:30842198:M	AAAAAAAAAAAACCAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:20:255,40,0	1/1:0,17:17:255,50,0	1/1:1,21:23:255,50,0
-chr21	30847416	chr21:30847416:M	AAAAAAAAAAAATAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:35:255,103,0	1/1:2,28:31:255,55,0	1/1:0,40:40:255,118,0
-chr21	30849697	chr21:30849697:M	CACACACACACACACGCGCGCGCGCACACACACACACACACAC	<23.5>,<33.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,6:8:210,210,210,24,24,0	1/2:0,10,1:14:255,45,15,255,0,255	2/2:0,0,4:5:139,139,139,15,15,0
-chr21	30851142	chr21:30851142:M	ATATATATATATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:6:61,12,0	0/0:0,0:3:0,3,8	.
-chr21	30851163	chr21:30851163:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:78,2,0	1/1:0,1:2:33,5,0	0/1:0,2:3:45,0,3
-chr21	30866162	chr21:30866162:M	ACACACACACACACACACACACACACACACACACACACACA	<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,35,0:36:255,108,0,255,108,255	1/2:0,14,8:23:255,142,177,255,0,255	1/1:0,28,0:29:255,87,0,255,87,255
-chr21	30867730	chr21:30867730:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,8:13:195,97,110,51,0,31	1/2:0,1,1:6:49,14,8,26,0,19	1/2:0,1,1:2:38,14,11,16,0,11
-chr21	30869146	chr21:30869146:M	ATATATATACATATATGTGTATATATATATATATATATATATATAT	<21>,<22>	.	.	Motif=AT	GT:AD:DP:PL	0/2:4,0,5:14:65,77,184,0,72,46	0/0:2,0,0:4:0,11,81,11,62,56	1/2:0,5,6:12:246,90,75,90,0,58
-chr21	30869384	chr21:30869384:M	TGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,3:6:160,38,20,38,0,20	0/0:0,0,0:1:0,3,10,3,12,15	2/2:0,0,2:2:60,30,24,6,6,0
-chr21	30869398	chr21:30869398:M	TATATATATATATATATATATATATATATA	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:5:53,13,0	.	1/1:0,1:1:11,3,0
-chr21	30870909	chr21:30870909:M	ACACACACACACACACACACACACACACACAC	<17>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,22,1:24:255,68,0,255,41,255	1/2:0,14,13:32:255,255,255,233,0,255	1/1:3,32,3:38:255,54,0,255,30,255
-chr21	30871225	chr21:30871225:M	AAAAAAAACAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:6:153,16,0	1/1:0,3:5:102,12,0	1/1:0,1:3:55,9,0
-chr21	30872688	chr21:30872688:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,13:15:255,255,229,42,26,0	2/2:0,1,9:10:254,165,138,27,12,0	1/2:3,10,9:22:255,105,96,97,0,145
-chr21	30876230	chr21:30876230:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:227,40,0	0/1:7,9:16:104,0,71	1/1:2,11:13:156,4,0
-chr21	30879280	chr21:30879280:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:5,33:39:255,13,0	1/1:4,28:36:255,24,0	1/1:0,31:31:255,91,0
-chr21	30888116	chr21:30888116:M	CACACACACACACACACACACACAC	<9.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:25,0:26:0,65,255	0/1:21,17:39:255,0,255	0/0:30,0:32:0,96,255
-chr21	30921538	chr21:30921538:M	AAAAAAAAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,0:36:0,103,255	0/1:22,19:42:221,0,255	0/0:35,1:36:0,88,255
-chr21	30935715	chr21:30935715:M	GGGGGGGGGGGG	<11>	.	.	Motif=G	GT:AD:DP:PL	0/1:8,10:18:128,0,92	1/1:2,11:13:155,4,0	0/1:10,15:25:192,0,104
-chr21	30943175	chr21:30943175:M	TATAAATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,17:17:255,50,0	1/1:0,27:27:255,80,0
-chr21	30957610	chr21:30957610:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:16:255,47,0	1/1:0,21:21:255,63,0	1/1:0,26:32:255,84,0
-chr21	30958092	chr21:30958092:M	ACACACACACACACACACACACACACACACACACACACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23:26:255,77,0	1/1:0,19:20:255,60,0	1/1:0,22:26:255,77,0
-chr21	30958483	chr21:30958483:M	GTGTGTGTGTGTGTGTGTGTGTGTTTGTG	<17.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,14:28:255,255,255,255,0,255	1/1:0,33,0:35:255,93,0,255,103,255	1/2:0,11,2:13:255,54,19,255,0,255
-chr21	30959343	chr21:30959343:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:0,5:6:140,15,0	1/1:0,3:4:86,9,0
-chr21	30959443	chr21:30959443:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,36:38:255,87,0	1/1:2,29:33:255,61,0	1/1:4,39:44:255,57,0
-chr21	30968763	chr21:30968763:M	AAAAAAAAAACAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:23:255,66,0	1/1:0,27:28:255,82,0	1/1:1,19:21:255,44,0
-chr21	30968939	chr21:30968939:M	GAAAGAGAGAGAGAAAGAAGGAAAGAAAGGAAGGAAAGAA	<7>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:13,3:19:55,0,243	0/0:8,1:10:0,1,156	0/1:9,4:14:62,0,166
-chr21	30974558	chr21:30974558:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:1,29:32:255,76,0	1/1:2,30:32:255,58,0
-chr21	30974987	chr21:30974987:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,17:21:255,7,0	1/1:3,17:22:255,12,0	1/1:1,12:14:193,20,0
-chr21	30977846	chr21:30977846:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,6:7:89,3,0	1/1:0,3:4:60,11,0	1/1:0,7:7:123,21,0
-chr21	30987664	chr21:30987664:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:8:56,0,28	1/1:0,6:8:120,23,0	0/1:7,3:11:18,0,96
-chr21	30993252	chr21:30993252:M	TATATATATATA	<8>	.	.	Motif=TA	GT:AD:DP:PL	1/1:2,38:41:255,72,0	1/1:0,34:34:255,102,0	1/1:0,33:33:255,99,0
-chr21	30993277	chr21:30993277:M	TATATATATGTGTATATATAT	<9>	.	.	Motif=TA	GT:AD:DP:PL	0/1:42,14:59:114,0,255	0/1:20,17:37:209,0,255	0/1:34,14:48:123,0,255
-chr21	30993334	chr21:30993334:M	ACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,25:29:255,56,0	1/1:4,37:42:255,33,0	1/1:1,30:36:255,70,0
-chr21	30999071	chr21:30999071:M	TTTTATTTTATCGTATTTTATTTTATTTTATTTTATTTTA	<9>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:15,8:23:86,0,222	0/1:15,13:28:153,0,190	0/1:11,13:24:173,0,136
-chr21	31009121	chr21:31009121:M	TTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:83,9,0	1/1:0,3:4:81,9,0	1/1:0,2:2:68,6,0
-chr21	31010336	chr21:31010336:M	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	<6.8>	.	.	Motif=AGGA	GT:AD:DP:PL	1/1:0,0:1:0,0,0	1/1:0,6:6:74,17,0	1/1:0,2:4:45,11,0
-chr21	31011348	chr21:31011348:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:206,35,0	1/1:2,18:20:255,25,0	1/1:2,14:17:219,15,0
-chr21	31029267	chr21:31029267:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:11,0,53	0/1:2,4:7:47,0,24	0/0:14,1:16:0,29,234
-chr21	31029387	chr21:31029387:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,21:32:255,0,112	0/1:16,15:31:175,0,192	0/0:29,2:31:0,55,255
-chr21	31029688	chr21:31029688:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:171,17,0	1/1:0,26:28:255,81,0	1/1:1,23:25:255,55,0
-chr21	31042646	chr21:31042646:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,17:36:255,0,255	0/1:14,9:25:147,0,244	1/1:3,25:31:255,16,0
-chr21	31046279	chr21:31046279:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:124,21,0	1/1:0,7:9:119,21,0	1/1:0,11:12:201,35,0
-chr21	31050234	chr21:31050234:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:6:131,61,46,27,0,11	1/2:0,2,3:6:146,58,43,33,0,16	1/2:0,3,0:5:104,19,9,50,0,36
-chr21	31054015	chr21:31054015:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:30:255,51,0	1/1:0,14:18:255,45,0	1/1:0,15:16:255,45,0
-chr21	31055973	chr21:31055973:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,2,20:22:255,255,255,66,29,0	1/2:0,7,10:20:255,175,118,134,0,78	1/2:0,13,11:24:255,192,123,226,0,158
-chr21	31061692	chr21:31061692:M	AAAAAAAAAAAAAAGAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:18:238,33,0	0/1:8,10:22:102,0,71	1/1:1,18:20:255,39,0
-chr21	31064059	chr21:31064059:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:15:255,44,0	1/1:0,4:6:128,17,0	1/1:0,13:14:255,42,0
-chr21	31069176	chr21:31069176:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	.	0/1:9,3:12:11,0,103	0/0:0,0:1:0,0,0
-chr21	31073487	chr21:31073487:M	AAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,55,0:55:255,165,0,255,165,255	1/2:0,24,15:40:255,255,255,255,0,255	1/1:0,49,0:52:255,153,0,255,150,255
-chr21	31074222	chr21:31074222:M	CACAAACACACACACACACACACACACACACACACACAAACACACA	<20>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,16,1:21:255,61,0,255,42,255	1/2:0,9,7:16:255,116,69,149,0,102	1/1:0,22,0:23:255,67,0,255,65,255
-chr21	31077721	chr21:31077721:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:25:0,55,255	0/1:7,9:19:120,0,75	0/0:22,0:26:0,73,255
-chr21	31082605	chr21:31082605:M	AAAAAAAAAAAAAAGAAAAGAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,8:20:88,0,162	0/1:10,12:23:145,0,109	0/0:18,2:20:0,23,255
-chr21	31086494	chr21:31086494:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<24.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,1:1:35,3,0	1/1:0,3:6:108,9,0	0/0:0,0:2:0,3,21
-chr21	31089047	chr21:31089047:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,6:21:57,0,194	0/1:18,6:27:37,0,253	0/0:16,3:20:0,5,241
-chr21	31089419	chr21:31089419:M	TATATATATAT	<7>,<7.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,4,4:8:173,37,14,37,0,14	0/2:0,1,1:3:30,0,9,0,6,12	1/1:0,3,1:4:83,12,0,28,1,16
-chr21	31089429	chr21:31089429:M	TTTTTTTTTATTTATTTTTTTTTTTT	<25>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,10,14:27:255,255,255,92,0,255	1/2:0,5,12:17:255,255,255,63,0,104	0/2:5,0,21:28:255,255,255,0,66,39
-chr21	31091878	chr21:31091878:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:5:15,0,32	0/1:2,1:5:17,0,22	0/1:6,3:9:26,0,78
-chr21	31097880	chr21:31097880:M	TTTTTTTTATTTTTTTTTATTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,7:23:67,0,240	0/1:10,18:28:243,0,99	0/0:33,0:33:0,97,255
-chr21	31112362	chr21:31112362:M	TATATATATATATATATATATATATA	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,4:7:170,17,0	0/0:0,0:2:0,3,17	0/0:6,0:8:0,24,223
-chr21	31112387	chr21:31112387:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<17.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:6,2:9:0,5,39	0/0:2,0:3:0,6,18	0/1:9,4:14:7,0,40
-chr21	31119471	chr21:31119471:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:1,37:41:255,99,0	0/1:14,27:43:255,0,132
-chr21	31119812	chr21:31119812:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,35:38:255,56,0	1/1:3,37:41:255,57,0	0/1:35,16:52:151,0,255
-chr21	31127413	chr21:31127413:M	TTTTTTTTTTTTTTTTTCTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:20:86,0,150	0/1:6,14:22:187,0,50	0/1:10,5:17:47,0,139
-chr21	31135651	chr21:31135651:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,82,0	0/1:13,16:30:195,0,152	0/1:16,16:32:198,0,198
-chr21	31142631	chr21:31142631:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAAGAAAAAGAAAAAGAAAAAAAA	<47>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:10:181,0,24	1/1:0,10:10:255,30,0	0/0:7,0:7:0,21,184
-chr21	31143440	chr21:31143440:M	TATATATAATTTTTATATATATATATA	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:11,10:21:116,0,134	0/0:34,0:34:0,100,255
-chr21	31144831	chr21:31144831:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,8:9:123,9,0	1/1:0,4:4:67,12,0	0/0:1,0:1:0,3,17
-chr21	31146711	chr21:31146711:M	AAAAAAAAAAAAAATGAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,18:22:255,10,0	1/1:3,17:20:239,7,0	0/1:7,9:16:112,0,77
-chr21	31148951	chr21:31148951:M	TTTTTCTTTTTCTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,23:30:255,0,36	0/1:8,25:33:255,0,107	0/1:21,26:47:255,0,255
-chr21	31152022	chr21:31152022:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,1:5:119,26,14,91,0,86	1/2:0,3,2:7:159,55,39,92,0,81	1/2:0,0,3:6:129,89,78,23,0,9
-chr21	31153713	chr21:31153713:M	ATATATATATATATATA	<6.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:26,21,0:47:255,0,255,255,255,255	1/2:1,17,9:27:255,143,212,255,0,255	0/2:21,0,21:42:255,255,255,0,255,255
-chr21	31154062	chr21:31154062:M	AAAAAAACAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:32:176,0,252	0/1:18,20:38:251,0,214	0/0:36,0:37:0,109,255
-chr21	31161036	chr21:31161036:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,20,0:20:255,60,0,255,60,255	1/1:0,13,1:19:255,27,0,255,1,255	1/2:0,7,6:15:255,158,151,191,0,173
-chr21	31173503	chr21:31173503:M	AAAGCAAGAAAGAAAGAGAGAGCGAGAGAAAGAGAGAGAGAGAGAGAGAGAAAAGAAAAGAAAGAAAGAAAG	<19>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:6,4:10:44,0,81	0/1:7,2:9:9,0,96	0/0:9,0:9:0,26,163
-chr21	31179547	chr21:31179547:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,1:41:0,101,255	0/1:15,9:27:98,0,193	0/0:38,2:43:0,89,255
-chr21	31179903	chr21:31179903:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,18,144	0/1:1,6:7:140,0,6	0/0:5,0:6:0,15,135
-chr21	31180522	chr21:31180522:M	TTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,0:36:0,107,255	0/1:18,21:41:255,0,255	0/0:34,0:34:0,102,255
-chr21	31181738	chr21:31181738:M	CTTCTTCTTCTTCTTCTTCTT	<6.3>,<7.3>	.	.	Motif=CTT	GT:AD:DP:PL	0/1:7,4,0:11:71,0,150,58,98,128	0/2:5,0,4:9:31,47,164,0,71,46	1/1:0,7,0:7:181,21,0,123,20,105
-chr21	31183697	chr21:31183697:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,2:29:0,48,255	0/0:21,0:23:0,67,255	0/1:10,5:15:44,0,133
-chr21	31196299	chr21:31196299:M	TTTTCTTTTCTTTTTTCTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:16,0:16:0,47,255	0/1:10,8:20:86,0,141
-chr21	31199533	chr21:31199533:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:25:0,55,255	0/1:9,12:23:160,0,89	0/0:19,2:22:0,28,255
-chr21	31199911	chr21:31199911:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,2:35:0,66,255	0/0:34,3:41:0,67,255	0/1:17,16:34:183,0,210
-chr21	31202389	chr21:31202389:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:12,20:34:251,0,130	0/0:29,0:31:0,90,255
-chr21	31215562	chr21:31215562:M	AAAAAAGAAAAAAAAAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:9,0,20	0/1:1,3:5:47,0,2	0/0:5,0:8:0,21,110
-chr21	31222677	chr21:31222677:M	ATATATATATATATATATATATATATATATAT	<16.5>,<18.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:6,2,3:11:38,36,44,0,17,138	0/0:2,0,0:4:0,5,14,9,23,69	1/2:0,3,1:6:15,7,5,7,0,67
-chr21	31225657	chr21:31225657:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:31:0,55,255	0/1:13,11:26:120,0,154	0/0:26,1:27:0,62,255
-chr21	31226953	chr21:31226953:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:2:0,6,53	0/1:1,3:5:76,0,12	0/0:2,0:2:0,6,53
-chr21	31228078	chr21:31228078:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,3:25:0,15,255	0/1:7,11:19:146,0,66	0/0:17,3:21:0,7,255
-chr21	31228221	chr21:31228221:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,4:7:39,5,0	.	.
-chr21	31232014	chr21:31232014:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:25:0,73,255	0/1:16,17:34:200,0,193	0/0:34,0:36:0,105,255
-chr21	31242861	chr21:31242861:M	AAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAGAAAAGAAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:3,0,51	0/0:0,0:2:0,3,12	1/1:0,3:3:52,9,0
-chr21	31243193	chr21:31243193:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:10:44,0,46	0/1:2,0:4:14,0,18	1/1:0,8:9:118,23,0
-chr21	31256589	chr21:31256589:M	ACACACACACACACACACACACACACACACACACACACAC	<24>,<25>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6,1:7:175,21,0,104,3,85	1/2:0,9,7:18:255,113,62,161,0,114	1/1:0,4,0:4:110,12,0,77,12,67
-chr21	31258814	chr21:31258814:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,4:17:255,63,24,237,0,191	1/2:0,6,13:19:255,190,172,104,0,50	1/1:0,32,0:33:255,99,0,255,97,255
-chr21	31259124	chr21:31259124:M	TTCTTTTTTTTTTTCCTTTTTCTTTTT	<4.7>	.	.	Motif=TTCTTT	GT:AD:DP:PL	1/1:0,14:14:255,42,0	.	1/1:2,25:27:255,40,0
-chr21	31259625	chr21:31259625:M	AATAAAATAATAATAATAATAATAATAATAAT	<12.7>,<13.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:16,14,0:30:255,0,255,255,255,255	1/2:0,6,3:10:249,64,36,107,0,80	0/0:29,0,0:29:0,87,255,87,255,255
-chr21	31260244	chr21:31260244:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:6,5:12:54,0,81	0/0:23,1:24:0,52,255
-chr21	31260676	chr21:31260676:M	AGAAAAAGAAAGATAAAGAGAAAAGAAAAAAAAAA	<6>	.	.	Motif=AGAAAA	GT:AD:DP:PL	0/1:15,9:24:105,0,226	0/1:17,15:34:200,0,243	1/1:1,16:18:255,27,0
-chr21	31261263	chr21:31261263:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13:34:255,0,255	1/1:1,15:17:255,21,0	0/0:20,0:21:0,63,255
-chr21	31262935	chr21:31262935:M	AAAAAAAAAGAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:21,24:46:255,0,255	0/0:53,0:55:0,159,255
-chr21	31267517	chr21:31267517:M	TTTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:21,0,12:35:114,209,255,0,255,255	1/2:1,24,4:34:255,56,39,255,0,255	0/0:27,1,0:32:0,56,255,90,255,255
-chr21	31269672	chr21:31269672:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,1:8:0,7,96	0/1:4,8:13:97,0,24	0/1:11,3:15:4,0,141
-chr21	31275127	chr21:31275127:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,1:23:0,49,255	0/1:16,12:30:133,0,201	0/0:18,1:23:0,48,255
-chr21	31281086	chr21:31281086:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:9:73,0,24	0/0:4,1:6:0,1,59	0/1:4,4:11:54,0,37
-chr21	31283538	chr21:31283538:M	TTTATTTATTTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/0:36,0:36:0,106,255	0/1:18,19:37:250,0,230
-chr21	31290647	chr21:31290647:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:59,59,59,6,6,0	1/1:0,3,0:4:109,12,0,109,12,109	0/2:1,0,5:8:153,154,181,0,29,8
-chr21	31298736	chr21:31298736:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:16,8,0:25:150,0,255,130,255,255	0/2:15,3,9:30:208,92,255,0,255,255	0/1:10,12,1:25:255,0,209,175,241,255
-chr21	31301842	chr21:31301842:M	AAATAAATAGATAAATAGATAAATAAATAAATAAA	<9.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:6,7:14:76,0,64	0/1:2,1:4:5,0,26	0/1:12,6:19:43,0,145
-chr21	31305417	chr21:31305417:M	AAAAATAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:30:203,0,167	0/1:13,18:31:220,0,134	0/1:9,17:27:234,0,82
-chr21	31311151	chr21:31311151:M	GTTTTTTTGTTTGTTTGTTTTGTTTTTTTTTTTGT	<8.5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:14,10:24:153,0,241	0/1:17,13:31:203,0,255	0/1:16,17:33:255,0,255
-chr21	31321335	chr21:31321335:M	TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.2>	.	.	Motif=TGTT	GT:AD:DP:PL	0/1:9,21:30:255,0,161	0/1:12,12:24:255,0,255	0/1:14,17:32:255,0,255
-chr21	31325287	chr21:31325287:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,10:27:197,0,255	0/1:15,19:34:255,0,255	0/1:18,16:35:255,0,255
-chr21	31327644	chr21:31327644:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:10:5,0,100	0/1:3,4:8:42,0,36	1/1:1,4:6:58,0,0
-chr21	31334290	chr21:31334290:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,23:25:255,72,0	0/1:14,8:23:88,0,186
-chr21	31335706	chr21:31335706:M	AAAAAAAAAGAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:31:0,90,255	0/0:25,0:27:0,75,255	0/1:17,9:28:160,0,255
-chr21	31336489	chr21:31336489:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:2,0,55	0/1:6,4:10:37,0,70	0/1:3,4:9:62,0,25
-chr21	31337501	chr21:31337501:M	TTATTATTATTATTGTTGTTATTATTATTATTATTATTATTATTATT	<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/0:13,0:14:0,38,211	0/1:22,11:34:88,0,255
-chr21	31352546	chr21:31352546:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:18:37,0,146	0/1:7,6:13:64,0,81	0/0:24,1:27:0,61,255
-chr21	31355174	chr21:31355174:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,22,178	0/1:4,11:18:141,0,14	0/1:5,2:8:12,0,59
-chr21	31355525	chr21:31355525:M	TTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<9.2>,<12.2>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:7,8,0:15:226,0,159,252,133,255	1/2:0,8,3:11:255,55,66,237,0,236	0/2:9,0,6:15:71,115,255,0,168,126
-chr21	31359806	chr21:31359806:M	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGGGAGGAA	<16.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:4,4:9:82,0,82	0/1:3,9:13:200,0,43	0/1:2,8:11:177,0,23
-chr21	31361838	chr21:31361838:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<10>,<12>	.	.	Motif=TAGA	GT:AD:DP:PL	0/2:16,0,17:33:213,255,255,0,247,195	0/1:16,27,0:43:255,0,151,255,232,255	0/2:10,0,13:23:165,229,255,0,149,110
-chr21	31362446	chr21:31362446:M	ATTATTATTATTATTATTATTATTATTATTATTAT	<13.7>	.	.	Motif=ATT	GT:AD:DP:PL	0/1:14,8:22:155,0,255	0/0:8,0:9:0,24,219	1/1:0,9:9:248,27,0
-chr21	31366086	chr21:31366086:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:2:0,3,11	0/1:2,3:5:67,0,40	0/1:1,1:2:22,0,22
-chr21	31377184	chr21:31377184:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,15:30:255,255,185,255,0,176	1/2:0,11,9:22:255,154,91,206,0,148	2/2:0,2,14:16:255,255,214,47,12,0
-chr21	31384402	chr21:31384402:M	AAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5,1:14:59,0,102,57,123,255	0/2:4,2,4:13:105,56,104,0,48,95	0/2:7,2,2:14:24,5,111,0,107,190
-chr21	31385718	chr21:31385718:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,4:26:0,2,255	0/1:14,4:18:17,0,192	0/1:12,11:24:129,0,157
-chr21	31387196	chr21:31387196:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:146,15,0	1/1:0,7:8:210,22,0	0/0:1,0:1:0,3,29
-chr21	31388213	chr21:31388213:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<16>,<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:5,0,16:23:255,189,255,0,142,96	1/2:0,15,12:29:255,150,64,187,0,102	0/0:4,0,0:5:0,12,121,12,121,121
-chr21	31388480	chr21:31388480:M	AAAATAAATGAAATAAAATAAAATAAAATAAA	<7.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:11,9:20:104,0,140	0/1:14,11:25:132,0,188
-chr21	31392571	chr21:31392571:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:12:166,17,0	0/1:2,7:10:96,0,5	0/1:2,3:5:37,0,19
-chr21	31392959	chr21:31392959:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:30:192,0,179	1/1:2,22:26:255,41,0	0/0:19,2:24:0,33,255
-chr21	31394688	chr21:31394688:M	TCTCTCTCTCTCTCTCTCTCGCTCTCTCTCTCTCTCTCTCTC	<12>,<22>,<24>,<25>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,0,3,6,0:11:173,197,255,105,109,78,30,58,0,26,96,149,55,53,121	2/4:3,0,5,3,5:18:189,220,255,132,165,122,42,160,24,111,25,189,0,101,149	1/3:0,6,0,6,0:16:255,147,146,251,102,237,151,0,151,134,203,52,200,148,186
-chr21	31394729	chr21:31394729:M	CACACACACACACACACACACACACACACACACACACACACACACAC	<19.5>,<21.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,3,3:12:160,142,172,81,101,89,83,77,0,102	0/3:3,0,0,3:8:90,102,187,102,171,165,0,79,64,63	1/2:0,8,5,0:22:255,112,61,245,0,197,255,123,245,255
-chr21	31395238	chr21:31395238:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:33:185,0,242	0/1:16,19:35:234,0,181	0/0:30,1:34:0,71,255
-chr21	31406181	chr21:31406181:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:26:0,76,255	0/0:29,2:31:0,56,255	0/1:17,9:26:84,0,228
-chr21	31409108	chr21:31409108:M	TTTTCTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/0:12,0:13:0,39,255	0/1:4,13:19:255,0,69
-chr21	31410087	chr21:31410087:M	GTGTGTGTGTGTGTGTGAGGTTGTGTGTGTG	<16.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:31,0:33:0,96,255	0/1:17,7:24:59,0,246
-chr21	31410487	chr21:31410487:M	GTGTGTGTGATAGTGTGTATGTGTATGTG	<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,24:24:255,71,0	1/1:0,34:34:255,100,0
-chr21	31411472	chr21:31411472:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2:11:15,0,100	0/1:3,5:9:68,0,24	0/1:2,5:11:74,0,24
-chr21	31412785	chr21:31412785:M	AAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,3,13	0/0:2,0:3:0,9,74	0/1:2,11:17:255,0,26
-chr21	31423701	chr21:31423701:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,4,32	0/0:1,0:2:0,3,31	1/1:0,19:19:255,57,0
-chr21	31428883	chr21:31428883:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:26:0,55,255	0/0:15,2:22:0,18,255	0/1:13,12:27:158,0,155
-chr21	31428893	chr21:31428893:M	AAAAGTAAAAGTAAA	<1.8>	.	.	Motif=AAAAGT	GT:AD:DP:PL	0/0:26,2:28:0,40,255	0/1:20,7:27:71,0,255	0/1:31,6:37:19,0,255
-chr21	31430211	chr21:31430211:M	AAAAAAAAAAAAAAAA	<11>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,19:24:178,241,255,21,67,0	2/2:0,0,3:7:72,73,130,18,15,0	0/1:1,5,2:12:121,0,91,106,5,128
-chr21	31430226	chr21:31430226:M	ATATATATATATATATATATATA	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,0:16:1,0,102	0/0:5,0:6:0,16,71	1/1:3,6:16:106,7,0
-chr21	31430274	chr21:31430274:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/0:31,0:32:0,86,255	0/0:17,0:17:0,46,190	0/1:9,14:25:115,0,34
-chr21	31438180	chr21:31438180:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,14	0/0:0,0:1:0,3,17	1/1:0,13:14:255,42,0
-chr21	31441886	chr21:31441886:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,45,0	1/1:1,13:17:255,19,0	0/1:20,5:27:68,0,255
-chr21	31442071	chr21:31442071:M	ATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,4:4:47,11,0	.	0/0:17,0:17:0,51,255
-chr21	31445017	chr21:31445017:M	AGAACAGAAGAGAAGAGAAAAGAAAGAACAGAA	<7.8>	.	.	Motif=AGAAC	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,19:19:255,57,0	1/1:0,28:28:255,84,0
-chr21	31448610	chr21:31448610:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:21:220,0,13	0/1:8,8:18:98,0,89	0/1:7,9:16:113,0,78
-chr21	31451710	chr21:31451710:M	TGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<23>,<24>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,10,8:18:255,134,83,168,0,117	2/2:0,3,16:19:255,255,211,56,7,0	1/2:0,9,10:19:255,164,111,149,0,94
-chr21	31453691	chr21:31453691:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<8.5>,<9.5>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,25,0:25:255,75,0,255,74,255	1/2:0,5,3:8:210,54,31,90,0,68	1/2:0,11,10:21:255,186,127,205,0,146
-chr21	31455280	chr21:31455280:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,2,2:6:50,5,31,11,0,20	1/2:0,3,2:5:99,28,19,49,0,35	2/2:0,0,3:3:51,51,51,9,9,0
-chr21	31455417	chr21:31455417:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:143,0,217	1/1:0,29:29:255,85,0	0/1:14,13:28:165,0,174
-chr21	31462730	chr21:31462730:M	TTTTTTGTTTTTTTTTTTTGTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,24:25:255,56,0	1/1:0,9:10:163,29,0	1/1:1,16:19:255,37,0
-chr21	31463813	chr21:31463813:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:19:134,0,90	0/0:22,0:23:0,67,255	0/1:15,10:28:104,0,205
-chr21	31464846	chr21:31464846:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,6:15:117,0,173	1/1:0,7:9:196,24,0	0/1:9,3:14:43,0,205
-chr21	31465576	chr21:31465576:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:20:119,0,128	1/1:2,16:18:247,18,0	0/1:17,9:26:88,0,233
-chr21	31468086	chr21:31468086:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,12:23:158,0,116	1/1:0,25:25:255,73,0	0/1:10,9:19:105,0,122
-chr21	31469080	chr21:31469080:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:9:92,46,74,53,0,90	1/1:0,5,0:8:107,20,0,122,21,168	0/1:3,4,2:10:52,0,45,44,9,115
-chr21	31470002	chr21:31470002:M	TTTTTTTTTTTTTTTTTT	<14>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,9:19:255,164,200,247,0,220	1/1:0,24,0:25:255,75,0,255,75,255	1/2:1,13,8:22:255,125,177,255,0,255
-chr21	31471871	chr21:31471871:M	AATAATAATAATAATAATAATAATAATAATAA	<9.3>,<11.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/2:0,18,16:34:255,255,255,255,0,255	1/1:0,32,0:32:255,96,0,255,96,255	1/2:0,19,9:28:255,168,184,255,0,255
-chr21	31474547	chr21:31474547:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,11:21:247,0,184	1/1:0,34:36:255,102,0	0/1:7,15:24:255,0,121
-chr21	31475026	chr21:31475026:M	TTATTATTATTATTATTATTATTATTATTATTATTATT	<13.3>,<16.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,11,8:20:255,236,204,255,0,255	1/1:0,4,0:5:99,9,0,110,15,138	1/2:0,0,4:6:139,119,113,20,0,8
-chr21	31477475	chr21:31477475:M	TTTTTTTTTTTTTTTTTT	<15>,<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,10,2:13:255,229,211,53,62,32,255,176,0,255	1/2:0,14,10,0:25:255,170,110,235,0,165,255,181,237,255	2/3:0,0,9,5:15:255,255,255,127,132,103,236,165,0,237
-chr21	31482061	chr21:31482061:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<15>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,23,21:46:255,255,255,255,0,255	1/1:0,31,0:34:255,99,0,255,99,255	1/2:0,12,27:39:255,255,255,255,0,238
-chr21	31487538	chr21:31487538:M	TTTTTTTTTTTTTTGTATTTTTTTTTTTTTT	<29>,<30>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:181,181,181,29,29,0	1/2:0,2,4:6:105,57,51,34,0,17	1/2:0,3,3:6:119,45,36,52,0,36
-chr21	31489007	chr21:31489007:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,13:40:128,0,255	1/1:0,33:33:255,97,0	0/1:17,24:42:255,0,190
-chr21	31489495	chr21:31489495:M	GAGGGAGGGAGACAGGGAGGGAAGGAAGGGAGGGAGGGAGGGAGGGAGGGA	<13.8>	.	.	Motif=GAGG	GT:AD:DP:PL	0/0:8,0:9:0,24,102	0/1:7,4:11:15,0,49	0/0:6,0:7:0,19,79
-chr21	31489572	chr21:31489572:M	CCCCCCCCCCC	<10>	.	.	Motif=C	GT:AD:DP:PL	1/1:2,19:21:255,24,0	1/1:0,17:17:255,50,0	1/1:1,24:25:255,55,0
-chr21	31491150	chr21:31491150:M	AAGGAAGGGAAGGAAGGGAAGGAAGGAAGGA	<10>	.	.	Motif=AAGG	GT:AD:DP:PL	0/1:10,10:20:223,0,221	1/1:0,28:28:255,84,0	0/1:14,10:24:217,0,255
-chr21	31492042	chr21:31492042:M	TATGTGTGTATATATATATGTGATGTGTGTATATATGTATGTAT	<11.5>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:14,19:37:109,0,66	1/1:0,26:31:255,57,0	0/1:17,12:30:49,0,101
-chr21	31496460	chr21:31496460:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,6,3:12:255,51,17,129,0,102	1/1:0,4,1:6:142,17,0,77,1,62	1/1:0,2,0:3:73,9,0,52,9,46
-chr21	31499869	chr21:31499869:M	AAAACAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:31:255,91,0	1/1:0,28:31:255,86,0	1/1:0,36:36:255,105,0
-chr21	31500167	chr21:31500167:M	AAAATAAAATAAAATAAATAAAA	<4.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:31,0:31:0,93,255	0/1:15,19:34:255,0,239
-chr21	31506011	chr21:31506011:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,3:8:161,44,29,80,0,59	1/1:0,9,0:10:255,28,0,176,27,151	1/1:0,5,0:7:156,19,0,112,18,98
-chr21	31506262	chr21:31506262:M	ACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,12:25:255,225,152,245,0,172	1/1:0,33,0:38:255,113,0,255,111,255	1/2:0,17,15:32:255,255,182,255,0,219
-chr21	31508388	chr21:31508388:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:19:123,0,106	0/1:7,2:10:5,0,101	0/1:4,12:16:164,0,23
-chr21	31510815	chr21:31510815:M	AAAAAAAAAAAAACAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,23:24:255,53,0	1/1:3,32:35:255,50,0	1/1:2,30:34:255,63,0
-chr21	31519509	chr21:31519509:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:8:94,5,0	1/1:0,5:5:84,15,0	0/1:1,2:5:27,0,7
-chr21	31521737	chr21:31521737:M	CACACACAAACACACACACACACACACACACACACACACACA	<23>,<25>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,4,8:13:255,214,196,108,0,82	2/2:0,0,14:14:255,255,255,42,42,0	1/2:0,6,8:16:255,207,183,158,0,138
-chr21	31524017	chr21:31524017:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:30:116,0,255	0/0:29,1:31:0,73,255	0/1:12,14:27:176,0,150
-chr21	31525368	chr21:31525368:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,35,243	0/1:14,5:19:29,0,183	0/0:20,0:21:0,61,255
-chr21	31526034	chr21:31526034:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:11:162,14,0	1/1:0,6:7:114,20,0	1/1:0,8:10:161,29,0
-chr21	31528829	chr21:31528829:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:41:255,121,0	1/1:0,43:44:255,129,0	1/1:0,48:49:255,144,0
-chr21	31531761	chr21:31531761:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,21:34:255,0,105	0/0:35,2:38:0,76,255	1/1:3,33:39:255,59,0
-chr21	31537443	chr21:31537443:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,19:27:255,0,134	0/0:14,0:20:0,39,255	1/1:0,20:22:255,63,0
-chr21	31539271	chr21:31539271:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:196,0,205	1/1:1,21:22:255,47,0	0/0:26,0:27:0,79,255
-chr21	31540386	chr21:31540386:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:16:0,46,255	0/1:10,4:16:21,0,141	0/0:25,1:27:0,62,255
-chr21	31542427	chr21:31542427:M	AAAAAAAAAGAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:23:138,0,157	0/0:20,0:20:0,59,255	1/1:3,32:35:255,49,0
-chr21	31546188	chr21:31546188:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,19:37:255,255,255,255,0,191	1/1:0,24,0:24:255,72,0,255,71,255	2/2:0,0,28:28:255,255,255,83,83,0
-chr21	31546557	chr21:31546557:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<6.8>,<9.8>,<10.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/3:0,8,0,7:17:255,204,175,255,131,255,172,0,255,238	1/1:0,22,0,0:28:255,81,0,255,83,255,255,83,255,255	2/3:0,0,15,16:31:255,255,255,255,255,203,255,255,0,185
-chr21	31548133	chr21:31548133:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:6:103,0,12	1/1:0,0:2:15,3,0	1/1:0,4:5:142,13,0
-chr21	31548482	chr21:31548482:M	TTGTTGTTGTT	<4>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:12,2:14:0,17,85	1/1:1,3:4:17,1,0	0/0:30,0:31:0,72,253
-chr21	31552049	chr21:31552049:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:11,3,0	1/1:0,3:3:90,9,0	0/0:0,0:1:0,3,11
-chr21	31555187	chr21:31555187:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,15:32:185,0,218	1/1:0,35:35:255,103,0	0/0:31,0:33:0,94,255
-chr21	31556536	chr21:31556536:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,28:54:255,0,255	0/0:38,1:39:0,97,255	1/1:1,50:51:255,132,0
-chr21	31562564	chr21:31562564:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:20:255,60,0	1/1:0,20:21:255,63,0	1/1:0,19:22:255,65,0
-chr21	31564537	chr21:31564537:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,2,4:9:83,46,101,35,0,57	0/1:3,3,0:8:67,0,64,83,54,143	0/2:2,0,2:4:23,34,103,0,34,22
-chr21	31565032	chr21:31565032:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:12:55,0,89	0/0:15,1:17:0,22,227	1/1:1,16:19:255,37,0
-chr21	31566411	chr21:31566411:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,20:26:255,37,0	1/1:0,14:16:222,45,0	1/1:1,15:22:234,39,0
-chr21	31567031	chr21:31567031:M	TCTCTGTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:21,21:42:255,0,255	0/0:31,1:32:0,69,255	1/1:0,29:30:255,90,0
-chr21	31567529	chr21:31567529:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,7:33:43,0,255	1/1:0,24:26:255,63,0	0/0:39,0:40:0,117,255
-chr21	31569074	chr21:31569074:M	TTTTAATTTTATTTTTTTTTTA	<3.8>	.	.	Motif=TTTTAT	GT:AD:DP:PL	0/1:22,13:35:185,0,255	1/1:2,29:31:255,47,0	0/0:32,1:33:0,78,255
-chr21	31570685	chr21:31570685:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:41:185,0,255	1/1:2,14:16:203,13,0	0/0:24,2:30:0,51,255
-chr21	31571656	chr21:31571656:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,9:19:176,0,176	1/1:0,14:15:255,32,0	0/0:10,0:12:0,30,254
-chr21	31571668	chr21:31571668:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:2:0,3,23	0/1:3,3:6:51,0,51	1/1:0,0:2:17,3,0
-chr21	31574170	chr21:31574170:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:5:28,0,13	1/1:1,9:11:122,15,0	0/1:2,1:5:1,0,37
-chr21	31574614	chr21:31574614:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:8:121,0,28	0/1:2,3:8:94,0,34	0/1:1,2:6:51,0,26
-chr21	31577048	chr21:31577048:M	AAAAACAAAAAACAAACAAACAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,241	1/1:1,30:31:255,73,0	0/0:35,0:35:0,103,255
-chr21	31579809	chr21:31579809:M	AAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:3:11,3,0	1/1:0,3:4:101,12,0	0/0:0,0:1:0,0,0
-chr21	31585776	chr21:31585776:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,10:15:255,148,133,77,0,37	1/2:2,3,7:13:142,65,104,24,0,23	2/2:1,2,9:12:161,113,131,17,0,0
-chr21	31585937	chr21:31585937:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:6:72,0,0	0/1:2,8:11:115,0,2	1/1:0,10:10:176,29,0
-chr21	31587279	chr21:31587279:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,41:42:255,106,0	1/1:0,50:50:255,147,0	1/1:1,36:37:255,91,0
-chr21	31587931	chr21:31587931:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:19:255,54,0	1/1:0,19:23:255,68,0	1/1:0,25:25:255,75,0
-chr21	31588097	chr21:31588097:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,1:4:101,18,6,53,0,42	1/2:0,3,1:4:101,17,5,50,0,39	1/2:0,1,3:4:100,52,41,17,0,6
-chr21	31590020	chr21:31590020:M	ACACACACACATACACACACACACACACACACA	<18.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,19:20:255,57,0	1/1:0,21:21:255,63,0	1/1:0,12:13:255,36,0
-chr21	31590832	chr21:31590832:M	GGGGTGGGGGGCGGGGGGGAGGGGGGGGG	<22>,<28>	.	.	Motif=G	GT:AD:DP:PL	0/1:5,3,0:8:60,0,117,75,91,153	0/2:6,0,7:13:85,121,255,0,103,67	1/1:0,11,0:11:255,33,0,255,33,255
-chr21	31591568	chr21:31591568:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,3:19:29,36,235,0,228,255	0/1:12,10,1:24:110,0,144,125,192,255	2/2:0,2,16:20:255,255,255,53,23,0
-chr21	31592291	chr21:31592291:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14,0:32:170,0,245,255,255,255	0/2:18,0,22:41:255,255,255,0,255,200	1/1:0,43,0:44:255,129,0,255,132,255
-chr21	31593928	chr21:31593928:M	TTTTTTTTTTTTTTTCTTTTTTTTTT	<23>,<27>,<28>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,7,5:14:197,227,255,52,88,47,69,140,0,104	1/2:0,14,6,0:21:255,99,130,255,0,255,255,99,255,255	3/3:0,0,0,10:10:255,255,255,198,199,171,30,30,29,0
-chr21	31595480	chr21:31595480:M	TTTTTTTTTCTTTTCTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,12:29:139,0,237	0/1:14,17:31:209,0,156	0/0:38,0:38:0,112,255
-chr21	31599363	chr21:31599363:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:5:22,0,8	0/1:1,4:8:50,0,11	0/0:0,0:2:0,0,0
-chr21	31601432	chr21:31601432:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,15:26:255,231,198,189,0,118	0/1:7,4,4:16:87,0,164,18,62,97	1/1:0,21,2:27:255,74,0,255,42,255
-chr21	31602226	chr21:31602226:M	AAAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,9,88	0/1:5,12:19:255,0,104	.
-chr21	31602592	chr21:31602592:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:23:0,49,255	0/0:11,1:13:0,20,179	0/1:12,7:21:82,0,150
-chr21	31603593	chr21:31603593:M	ACACACACACACACACACACACACACAC	<13>,<15>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,16,0,11:31:255,255,255,255,255,255,255,0,255,255	1/2:3,16,14,0:33:255,195,255,230,0,255,255,255,255,255	3/3:0,0,0,22:25:255,255,255,255,255,255,74,74,74,0
-chr21	31606993	chr21:31606993:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:26:168,0,168	0/0:28,2:31:0,55,255	1/1:1,36:37:255,91,0
-chr21	31607875	chr21:31607875:M	AAGAAAAAAAAAAAGAAATAAATAAAGAAAGAAAGAGAGAGATGGACAGAGAGAAAGAAAGAAAGAAAGACAGAAAGAAAGAAAGAAGAAAGA	<8.5>	.	.	Motif=AAGA	GT:AD:DP:PL	1/1:0,5:5:114,15,0	1/1:0,2:2:48,6,0	1/1:0,2:2:44,6,0
-chr21	31608132	chr21:31608132:M	TTTATTTATTTATTTATTTATTTATTT	<7.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:10,8:19:83,0,117	0/0:25,0:27:0,73,255	1/1:0,24:24:255,70,0
-chr21	31612588	chr21:31612588:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:10:52,0,138	0/0:10,0:13:0,27,255	1/1:0,2:2:53,6,0
-chr21	31616857	chr21:31616857:M	TTTTTTCTTTTTATTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:247,0,255	0/1:16,13:29:255,0,255	1/1:0,24:24:255,72,0
-chr21	31618324	chr21:31618324:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	.	1/1:0,4:5:123,15,0	0/1:1,0:2:5,0,23
-chr21	31620706	chr21:31620706:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,2:19:0,20,255	0/0:23,2:25:0,39,255	0/1:11,4:16:23,0,163
-chr21	31622131	chr21:31622131:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATA	<9>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,2,4:11:163,83,66,41,0,24	2/2:0,0,0:1:0,0,0,0,0,0	1/2:0,4,1:6:159,22,4,88,0,71
-chr21	31629079	chr21:31629079:M	AAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,13:22:255,0,151	0/0:26,0:30:0,88,255	1/1:0,31:36:255,106,0
-chr21	31631721	chr21:31631721:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,36:37:255,91,0	1/1:0,29:30:255,88,0	1/1:0,28:28:255,82,0
-chr21	31632640	chr21:31632640:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:18:4,0,197	0/1:16,6:24:35,0,232	0/1:2,9:11:131,0,4
-chr21	31633645	chr21:31633645:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,21:36:255,0,176	0/1:23,27:50:255,0,255	1/1:1,45:47:255,120,0
-chr21	31634123	chr21:31634123:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14:16:255,42,0	1/1:0,18:21:255,48,0	1/1:0,15:18:255,45,0
-chr21	31634730	chr21:31634730:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2,0:3:49,0,19,34,25,53	0/2:1,0,3:4:74,49,65,0,24,15	1/1:0,5,1:6:169,18,0,86,1,69
-chr21	31634920	chr21:31634920:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,4,16:33:255,222,255,0,160,255	0/1:19,10,1:31:95,0,250,128,255,255	2/2:0,3,23:27:255,255,255,72,26,0
-chr21	31636513	chr21:31636513:M	TTTTTGTTTTGTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20:22:255,29,0	1/1:0,10:14:171,29,0	1/1:1,18:19:255,38,0
-chr21	31637234	chr21:31637234:M	TTATTATTTATTATTATTAATATTATTATTATT	<9>	.	.	Motif=TTA	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:6,8:14:175,0,119	0/0:31,0:31:0,93,255
-chr21	31641109	chr21:31641109:M	TTTTTTTTTTGTTGTTTTTTTTTGTTTTGTTTTTTTTTT	<38>,<49>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21,0:21:255,62,0,255,63,255	1/2:0,8,5:15:255,140,114,146,0,199	1/1:0,24,0:24:255,71,0,255,72,255
-chr21	31643999	chr21:31643999:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:7:47,0,30	0/1:1,2:4:21,0,16	1/1:1,6:8:93,7,0
-chr21	31650075	chr21:31650075:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:129,0,95	0/1:6,11:18:145,0,50	1/1:1,19:21:255,44,0
-chr21	31652835	chr21:31652835:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:51,2:54:0,122,255	0/1:6,14:21:191,0,43	0/0:45,2:49:0,108,255
-chr21	31652917	chr21:31652917:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:4:9,0,19	0/1:2,4:8:58,0,13	0/1:3,7:11:100,0,20
-chr21	31653960	chr21:31653960:M	AAAAAATAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:24,13:37:125,0,255	0/0:28,0:28:0,83,255
-chr21	31663120	chr21:31663120:M	TTTTTCTTTTTTTTTTTTT	<13>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,14,0:22:255,0,135,255,120,255	0/2:10,0,10:23:110,176,255,0,206,146	1/1:0,18,0:23:255,66,0,255,66,255
-chr21	31665971	chr21:31665971:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:17,0,23	0/1:7,2:9:6,0,88	1/1:0,6:7:100,18,0
-chr21	31670629	chr21:31670629:M	CACAGACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,21:43:255,0,255	0/0:41,1:43:0,106,255	1/1:0,51:51:255,150,0
-chr21	31671109	chr21:31671109:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:20,3,12:35:114,159,255,0,249,255	0/1:9,10,1:22:130,0,101,170,112,255	0/2:3,0,13:16:182,225,255,0,45,6
-chr21	31682377	chr21:31682377:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:26:107,0,198	0/0:30,1:33:0,79,255	1/1:1,31:35:255,84,0
-chr21	31683710	chr21:31683710:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/1:17,26:48:255,0,181	0/0:33,1:36:0,87,255
-chr21	31684992	chr21:31684992:M	GGGGGGGTGGGGGGGGGGTGGGG	<22>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,15:15:255,44,0	0/1:8,4:12:35,0,101	1/1:0,15:16:255,47,0
-chr21	31686204	chr21:31686204:M	AAAAAAAAAAAAAGAAAAAAAAAAAAAA	<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,9:14:117,132,255,0,87,47	0/1:3,10,0:14:239,0,41,170,48,185	2/2:1,0,10:12:155,150,171,15,24,0
-chr21	31689465	chr21:31689465:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,20:31:255,0,161	0/0:15,0:16:0,45,255	1/1:0,16:18:255,48,0
-chr21	31691673	chr21:31691673:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,1,7:19:91,121,255,0,119,119	1/1:3,18,0:24:255,18,0,255,62,255	0/2:5,1,17:24:240,255,255,0,57,28
-chr21	31699503	chr21:31699503:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,0:42:0,120,255	0/1:13,22:38:255,0,247	0/0:38,0:42:0,120,255
-chr21	31702509	chr21:31702509:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,0:45:0,133,255	0/1:18,11:29:114,0,236	0/0:52,1:53:0,137,255
-chr21	31704533	chr21:31704533:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:36:0,106,255	0/1:25,21:49:234,0,255	0/0:49,2:52:0,117,255
-chr21	31709351	chr21:31709351:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,5:30:51,0,255	0/0:30,0:32:0,96,255	1/1:0,6:10:178,5,0
-chr21	31709855	chr21:31709855:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,1:40:0,100,255	0/1:25,13:39:120,0,255	0/0:44,2:46:0,100,255
-chr21	31712223	chr21:31712223:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,25:26:255,255,255,58,75,0	1/2:2,10,10:23:255,140,223,148,0,230	2/2:3,0,16:19:230,255,255,3,48,0
-chr21	31712528	chr21:31712528:M	TTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,5:11:68,88,250,0,86,58	0/1:8,5,3:16:95,0,220,73,85,176	2/2:1,0,13:14:210,247,255,24,42,0
-chr21	31713747	chr21:31713747:M	GGGGTGGGGTGGGGGGGG	<3.8>	.	.	Motif=GGGGT	GT:AD:DP:PL	0/1:19,12:31:204,0,255	0/0:30,1:31:0,68,255	1/1:0,19:19:255,57,0
-chr21	31717827	chr21:31717827:M	ATATATATATATATATA	<13.5>,<14.5>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:13,4,3,0:23:140,0,255,20,255,255,179,255,255,255	0/3:10,0,0,5:18:14,52,255,52,255,255,0,255,255,255	1/2:0,11,9,0:21:255,104,41,134,0,73,255,104,134,255
-chr21	31723611	chr21:31723611:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,18:35:192,0,150	0/0:22,0:30:0,63,255	1/1:0,27:28:255,70,0
-chr21	31732180	chr21:31732180:M	GCCCCGCCCCCTCCCCGCCTCGTCCCGCCCTGCGCCGCCCTGCACCGCCCCGC	<10.8>	.	.	Motif=GCCCC	GT:AD:DP:PL	0/1:4,7:11:46,0,13	0/1:8,4:12:11,0,54	0/0:7,0:7:0,19,75
-chr21	31735264	chr21:31735264:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:3:30,3,0	.	1/1:0,6:8:187,24,0
-chr21	31737397	chr21:31737397:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:21:32,0,235	0/1:9,2:12:2,0,126	0/1:4,10:14:141,0,32
-chr21	31737562	chr21:31737562:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2,2:8:13,0,69,0,25,71	0/1:12,9,2:26:111,0,148,144,137,255	0/2:2,1,9:13:130,146,243,0,13,8
-chr21	31739170	chr21:31739170:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,2:26:0,39,255	0/1:19,18:43:238,0,214	0/0:49,1:51:0,124,255
-chr21	31739889	chr21:31739889:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:6:0,18,107	0/0:6,1:7:0,3,85	0/1:5,3:9:26,0,70
-chr21	31740692	chr21:31740692:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0,0:4:0,12,83,6,64,58	0/1:4,3,0:9:76,0,95,93,110,214	0/2:1,0,7:9:201,213,255,0,26,3
-chr21	31742780	chr21:31742780:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,12	1/1:0,2:4:30,4,0	0/1:1,3:5:38,0,14
-chr21	31745357	chr21:31745357:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:23:143,0,135	0/0:35,2:39:0,69,255	1/1:2,19:21:255,26,0
-chr21	31746683	chr21:31746683:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,10:16:255,174,150,45,0,38	2/2:0,0,11:11:255,223,193,33,32,0	1/1:2,15,2:19:255,19,0,211,19,255
-chr21	31746848	chr21:31746848:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:34,0,35	0/1:4,6:13:81,0,39	0/0:8,0:11:0,19,137
-chr21	31748867	chr21:31748867:M	TTTTCTTTTTCTTTTCTTTCCTTTTTTTTTTTTTTTTTTTT	<6.5>,<7.2>	.	.	Motif=TTTTCT	GT:AD:DP:PL	2/2:0,0,3:3:74,74,75,9,9,0	1/1:0,4,0:4:100,12,0,101,12,102	0/0:1,0,0:1:0,3,27,3,27,27
-chr21	31749973	chr21:31749973:M	AAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:30:180,0,255	0/1:15,7:25:114,0,255	1/1:0,14:15:255,42,0
-chr21	31750467	chr21:31750467:M	TTTTTTCTTTTCTTTTCTTTTCGTTTTTTTTTTTTTTTTTT	<40>,<42>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,13:14:242,255,255,41,42,0	1/2:1,4,2:9:84,19,32,70,0,110	2/2:1,0,19:21:255,255,255,44,60,0
-chr21	31751658	chr21:31751658:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,21,2:25:255,37,0,255,38,255	1/2:2,7,4:14:162,40,37,64,0,98	1/1:1,17,1:19:255,38,0,255,38,255
-chr21	31753782	chr21:31753782:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,16:19:255,255,255,78,0,29	1/2:1,5,15:22:255,228,255,129,0,93	1/1:0,6,0:6:178,18,0,174,18,171
-chr21	31753798	chr21:31753798:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,16:33:119,0,91	0/0:15,1:16:0,32,165	1/1:0,30:35:255,95,0
-chr21	31757605	chr21:31757605:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,8:13:94,109,231,0,81,44	0/1:3,5,2:11:117,0,59,53,20,72	2/2:2,0,14:16:195,201,248,14,46,0
-chr21	31761135	chr21:31761135:M	TCTCTCCCTCCCTCTCTCCCTCCCTCTCTCCCTCTTTCTCTTTCTCCCTCCCTTTCTCCCTTTCTCTCTCTCTCTCTTTCTCTCT	<19.2>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:2,2:5:24,0,25	0/1:6,3:9:27,0,83	0/1:3,2:7:21,0,40
-chr21	31762836	chr21:31762836:M	TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,34:35:255,103,0	1/1:0,26:26:255,77,0
-chr21	31770101	chr21:31770101:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:9:189,42,24,99,0,74	2/2:2,1,9:12:124,105,153,2,18,0	1/1:0,9,0:10:255,30,0,183,29,158
-chr21	31771013	chr21:31771013:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:22:255,54,0	0/1:1,6:12:163,0,24	1/1:0,22:25:255,74,0
-chr21	31772337	chr21:31772337:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:37:255,109,0	1/1:0,15:15:255,44,0	1/1:0,33:33:255,97,0
-chr21	31774025	chr21:31774025:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:26:0,66,255	0/1:13,14:28:166,0,140	0/0:21,0:21:0,62,255
-chr21	31776758	chr21:31776758:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,9,2,4:15:255,110,75,197,39,155,245,0,127,223	2/3:0,1,7,10:18:255,255,255,168,150,116,128,82,0,78	1/1:0,23,0,0:25:255,74,0,255,73,255,255,74,255,255
-chr21	31779996	chr21:31779996:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,17:30:238,248,255,0,189,126	0/1:9,10,1:26:252,0,206,183,156,255	2/2:0,0,22:23:255,255,255,65,57,0
-chr21	31782896	chr21:31782896:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:3,10,10:25:250,135,225,131,0,226	2/2:1,0,22:23:255,255,255,50,66,0	1/1:0,21,0:24:255,70,0,255,71,255
-chr21	31785883	chr21:31785883:M	CCACTACCACCACCACCACCACCACCA	<45>	.	.	Motif=CCA	GT:AD:DP:PL	0/0:23,6:32:0,20,255	0/1:21,9:30:21,0,255	0/0:36,8:47:0,42,255
-chr21	31787642	chr21:31787642:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,2,11:27:138,174,255,0,169,185	0/1:6,11,1:19:152,0,63,185,72,255	2/2:2,0,20:22:255,255,255,28,60,0
-chr21	31787807	chr21:31787807:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:15:0,43,253	0/1:6,3:10:24,0,77	0/0:11,1:12:0,18,176
-chr21	31788117	chr21:31788117:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,8:17:255,121,97,132,0,90	1/2:1,5,6:15:218,69,71,94,0,76	1/2:1,3,11:16:206,137,162,26,0,9
-chr21	31788880	chr21:31788880:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,19:19:255,56,0	0/1:11,10:21:106,0,124	1/1:0,22:22:255,64,0
-chr21	31796630	chr21:31796630:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,18,11:29:255,255,255,255,0,255	2/2:0,0,10:13:255,255,255,31,31,0	1/1:0,36,0:36:255,106,0,255,108,255
-chr21	31799675	chr21:31799675:M	ACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<18.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,1,11,16:28:255,255,255,255,255,204,206,148,0,126	1/2:0,18,10,1:31:255,181,92,255,0,241,255,126,255,255	3/3:0,0,1,20:22:255,255,255,255,255,255,66,63,47,0
-chr21	31800059	chr21:31800059:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15>,<16>,<21>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,10,7:17:255,255,255,124,189,159,255,179,0,255	1/3:0,11,0,9:22:255,172,239,255,255,255,255,0,187,255	2/2:0,0,25,0:25:255,255,255,75,73,0,255,255,75,255
-chr21	31802596	chr21:31802596:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,8:20:89,0,133	0/1:7,6:14:62,0,89	0/1:4,9:13:120,0,32
-chr21	31803120	chr21:31803120:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2:8:11,0,81	0/0:8,1:10:0,10,116	1/1:0,9:11:163,29,0
-chr21	31804468	chr21:31804468:M	TCTCTCTCTCTCTCTCTCT	<8.5>,<10.5>,<11.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,9,11,0:21:184,130,196,102,0,144,197,119,183,255	2/3:1,0,11,7:20:227,255,255,74,88,34,90,131,0,86	1/1:0,20,2,0:23:217,39,0,248,17,255,255,30,255,255
-chr21	31806342	chr21:31806342:M	ACAACAACAACAACAACAACAACAACAACAACAACAACAACAA	<9.3>,<10.3>	.	.	Motif=ACA	GT:AD:DP:PL	0/2:13,0,16:30:255,255,255,0,255,255	0/1:10,14,1:25:255,0,224,232,250,255	2/2:0,0,40:40:255,255,255,120,118,0
-chr21	31814221	chr21:31814221:M	TTTATTTATTTATTTATTTATTTATTATTTA	<8.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:37,0:37:0,110,255	0/1:16,11:27:120,0,211	0/0:40,0:40:0,118,255
-chr21	31821753	chr21:31821753:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,1,7:19:73,108,255,0,153,157	0/1:13,13,0:30:184,0,140,255,190,255	2/2:3,1,25:29:255,255,255,21,50,0
-chr21	31825690	chr21:31825690:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/1:21,21:42:248,0,245	0/0:35,1:37:0,90,255
-chr21	31830774	chr21:31830774:M	AAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:15:121,0,148	0/0:15,0:18:0,50,255	1/1:0,18:20:255,59,0
-chr21	31835152	chr21:31835152:M	ATTAATTAATTAATTAATTAATTAA	<5.2>	.	.	Motif=ATTA	GT:AD:DP:PL	0/1:25,18:43:222,0,255	0/0:38,0:38:0,112,255	1/1:0,41:41:255,121,0
-chr21	31837540	chr21:31837540:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,11:31:120,0,249	0/1:19,17:38:204,0,219	1/1:1,33:36:255,87,0
-chr21	31841226	chr21:31841226:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7:19:212,0,124	0/0:9,0:10:0,27,253	1/1:0,16:22:255,60,0
-chr21	31843710	chr21:31843710:M	TCTCTCTCTCTCTCT	<67.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,7:24:12,0,255	0/0:16,5:21:0,3,255	0/1:15,18:33:117,0,255
-chr21	31843779	chr21:31843779:M	TCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTC	<11.8>,<12.8>,<33.8>	.	.	Motif=TCCT	GT:AD:DP:PL	2/3:0,0,10,7:18:210,213,227,66,77,46,162,176,0,233	1/3:0,6,0,5:11:198,56,38,154,55,138,145,0,99,134	2/3:0,0,7,18:27:255,255,255,199,199,173,143,143,0,157
-chr21	31843834	chr21:31843834:M	TTTCTTTTTCTTTTT	<22.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:18,7:25:2,0,255	0/0:18,5:23:0,14,255	0/1:16,18:34:96,0,255
-chr21	31849903	chr21:31849903:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,6:8:191,115,96,23,6,0	1/2:0,12,8:20:255,130,72,194,0,137	2/2:0,1,5:6:159,84,67,18,1,0
-chr21	31850852	chr21:31850852:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,2:20:0,23,255	0/1:10,13:26:164,0,105	0/0:18,1:20:0,41,255
-chr21	31853113	chr21:31853113:M	ATATATATATATATATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:7:89,20,0	0/0:0,0:2:0,4,15	1/1:0,2:2:26,6,0
-chr21	31853137	chr21:31853137:M	ACACACACACATACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,3:8:51,0,51	0/0:6,0:6:0,18,135	1/1:0,2:4:45,6,0
-chr21	31853265	chr21:31853265:M	ATAGATAGATAGATAGATAGATAGATAGATA	<6.8>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:0,19:19:255,56,0	1/1:0,14:14:255,41,0
-chr21	31853741	chr21:31853741:M	TATATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,13:44:146,0,255	0/1:7,6:13:71,0,88	0/0:29,0:32:0,89,255
-chr21	31855075	chr21:31855075:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,29:33:255,59,0	1/1:2,30:34:255,64,0	1/1:2,34:37:255,72,0
-chr21	31856724	chr21:31856724:M	TCTCTCTCTCTCTCTCTCTCTCT	<9.5>,<13.5>,<15.5>	.	.	Motif=TC	GT:AD:DP:PL	1/3:0,9,2,4:25:255,164,135,255,39,255,255,0,255,255	1/3:0,3,0,4:12:224,164,157,147,76,147,72,0,82,70	2/3:0,0,20,5:29:255,255,255,107,108,24,255,255,0,255
-chr21	31857384	chr21:31857384:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,23:43:255,0,191	1/1:0,28:29:255,85,0	0/0:33,0:33:0,97,255
-chr21	31857549	chr21:31857549:M	TTTTTTGTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,40:40:255,118,0	1/1:0,42:42:255,123,0	1/1:0,38:38:255,112,0
-chr21	31857814	chr21:31857814:M	ATTTATTTATTTATTTATTTATTTATTTATTT	<7>,<11>,<13>	.	.	Motif=ATTT	GT:AD:DP:PL	2/3:0,0,9,7:17:255,255,255,195,195,166,250,250,0,227	1/2:0,19,9,0:28:255,249,193,255,0,255,255,246,255,255	3/3:0,0,0,9:9:255,255,255,255,255,255,27,27,27,0
-chr21	31858141	chr21:31858141:M	TTGTTGTTGTT	<2.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:26,19:45:214,0,255	0/0:31,0:31:0,92,255
-chr21	31858924	chr21:31858924:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:239,40,0	0/1:6,11:20:155,0,57	1/1:2,8:13:140,2,0
-chr21	31862350	chr21:31862350:M	TTTTTTTTTTTTTCTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:21:115,0,144	1/1:1,21:23:255,49,0	0/0:30,2:34:0,61,255
-chr21	31863345	chr21:31863345:M	TTTTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,8:17:99,146,255,0,153,107	0/1:9,12,1:23:255,0,205,255,138,255	0/0:16,0,0:17:0,51,255,50,255,255
-chr21	31864998	chr21:31864998:M	CCTTCCTTTCTTCCTTCCTTCC	<6.5>	.	.	Motif=CCTT	GT:AD:DP:PL	0/1:17,11:30:150,0,235	1/1:0,15:15:255,44,0	0/0:27,0:27:0,80,255
-chr21	31865216	chr21:31865216:M	TCTATCAATCATCTATTTATCTATCATCTAT	<6.8>,<33.8>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:16,6,0:22:44,0,219,109,255,255	1/2:0,12,5:17:221,50,15,203,0,255	0/0:27,0,0:27:0,79,255,81,255,255
-chr21	31865578	chr21:31865578:M	ATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATC	<15.2>,<33.8>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:9,0,0:9:0,27,169,27,191,248	2/2:0,0,5:5:62,62,62,14,14,0	0/1:7,4,0:14:83,0,88,119,127,255
-chr21	31867823	chr21:31867823:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<16>	.	.	Motif=GA	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/1:10,13:25:255,0,196	0/0:24,0:27:0,72,255
-chr21	31868681	chr21:31868681:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,9:21:104,0,159	1/1:1,21:23:255,50,0	0/0:22,1:24:0,52,255
-chr21	31869154	chr21:31869154:M	GTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,7:18:255,122,156,255,0,255	1/1:0,12,0:13:255,39,0,255,39,255	2/2:2,0,13:15:190,231,255,9,45,0
-chr21	31871339	chr21:31871339:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,11,1:13:255,203,179,26,17,0,255,185,8,255	1/2:0,6,5,0:11:255,85,53,102,0,70,255,85,102,255	0/3:3,0,0,6:10:76,104,245,101,235,231,0,60,52,34
-chr21	31878259	chr21:31878259:M	AAAAAAAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,4:11:48,71,208,0,69,60	1/2:0,11,4:17:255,63,65,255,0,255	0/0:10,1,2:13:0,10,255,2,144,138
-chr21	31886424	chr21:31886424:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:127,0,92	0/1:11,8:19:82,0,133	0/0:38,1:42:0,104,255
-chr21	31892149	chr21:31892149:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,16:22:119,9,0	0/1:4,2:6:4,0,24	0/1:9,7:21:28,0,65
-chr21	31892181	chr21:31892181:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<16>,<17>	.	.	Motif=AG	GT:AD:DP:PL	0/2:4,2,5:11:73,33,46,0,23,54	0/0:6,1,0:7:0,8,51,18,69,118	1/2:3,5,7:17:117,39,37,3,0,43
-chr21	31892210	chr21:31892210:M	GTGTGTGTGTGTGTGTGTGTGT	<13>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:7,4:12:53,0,121	0/0:16,0:16:0,48,255
-chr21	31900447	chr21:31900447:M	ACACACACACACACACACACACACACACACACA	<15.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:7,0,13:20:175,230,255,0,106,67	1/2:1,17,19:40:255,255,255,255,0,255	0/0:21,2,0:23:0,33,255,67,255,255
-chr21	31905077	chr21:31905077:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:0,32:34:255,99,0	1/1:0,25:28:255,81,0
-chr21	31915055	chr21:31915055:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:23:255,66,0	1/1:0,24:27:255,75,0	1/1:0,31:33:255,96,0
-chr21	31917696	chr21:31917696:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<29>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,2:2:52,6,0	1/1:0,3:4:80,8,0	1/1:0,2:2:56,6,0
-chr21	31924267	chr21:31924267:M	TGTGTGTGTGTGTGTGTGTTTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/0:34,1:35:0,84,255	0/0:45,1:46:0,117,255	0/1:17,21:40:255,0,197
-chr21	31925925	chr21:31925925:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,112,0	1/1:0,21:21:255,62,0	0/1:17,25:42:255,0,185
-chr21	31926952	chr21:31926952:M	TTCTTTCTTTCTTTCCTTTTTCTTTCTTTCTTCCTTTCTTTCTTTCTCTCTCTCTCTTTCTTTTTTCTTTCTTATTTCTTTATTTCTTT	<13>,<20.5>	.	.	Motif=TTCT	GT:AD:DP:PL	1/2:1,3,1:7:95,26,43,46,0,63	1/2:1,1,3:6:79,45,65,12,0,28	0/2:2,0,3:7:77,70,118,0,37,39
-chr21	31931069	chr21:31931069:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:3:8,0,24	1/1:0,1:1:16,3,0	0/1:1,4:5:50,0,1
-chr21	31932912	chr21:31932912:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,2:12:0,0,132	0/0:12,0:12:0,35,201	0/1:9,3:12:16,0,119
-chr21	31933785	chr21:31933785:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:21:0,61,255	0/0:22,1:28:0,52,255	0/1:5,10:17:138,0,41
-chr21	31934443	chr21:31934443:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,121	0/0:2,0:2:0,6,33	0/1:1,3:5:45,0,3
-chr21	31939718	chr21:31939718:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0,1:25:0,72,255,56,255,255	0/2:15,0,6:22:39,85,255,0,251,193	0/1:11,9,2:22:198,0,254,124,158,253
-chr21	31952206	chr21:31952206:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41:43:255,108,0	1/1:0,38:40:255,117,0	0/1:14,33:49:255,0,116
-chr21	31955259	chr21:31955259:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,19:25:255,62,0	1/1:0,21:22:255,66,0	0/1:18,10:31:206,0,255
-chr21	31955427	chr21:31955427:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,26:30:255,86,0	0/1:9,11:24:238,0,192
-chr21	31960382	chr21:31960382:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,1:40:0,95,255	0/0:50,2:52:0,118,255	0/1:31,23:58:244,0,255
-chr21	31965589	chr21:31965589:M	TTTTTCTTTTTTTTTTTTTTTTTTT	<24>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3,0:12:18,0,125,52,134,207	0/1:6,4,0:10:38,0,72,67,84,185	0/2:5,1,5:12:61,75,183,0,56,62
-chr21	31968716	chr21:31968716:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:13,1,6:22:88,33,255,0,224,203	0/0:16,0,0:19:0,56,255,50,255,255	1/2:0,6,14:24:255,150,85,107,0,39
-chr21	31968754	chr21:31968754:M	GAGAGAGAGAGAG	<9.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:14,14:29:255,0,255	0/0:23,0:25:0,63,255	1/1:0,25:32:255,94,0
-chr21	31968804	chr21:31968804:M	GTGTTGTGTCTGTGTGTGTGTATGTGTTGTGTGTAAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<32>,<35>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,6:12:247,109,135,154,0,136	2/2:0,0,11:11:193,222,255,32,33,0	1/1:0,17,0:17:255,51,0,255,51,255
-chr21	31971070	chr21:31971070:M	TTTATTTATTTATTATTTATTTATTT	<6.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,32:37:118,45,0	1/1:0,28:30:107,42,0	1/1:0,24:29:90,35,0
-chr21	31971831	chr21:31971831:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,6:18:56,0,160	0/0:14,1:19:0,37,255	1/1:0,9:13:181,26,0
-chr21	31973562	chr21:31973562:M	GATGATGGTGATGGTGGTGGTGATGATGATGATGATGATGATGATGATG	<17.3>	.	.	Motif=GAT	GT:AD:DP:PL	0/1:15,9:24:101,0,216	0/0:20,0:20:0,59,255	1/1:0,22:22:255,65,0
-chr21	31974997	chr21:31974997:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,2:22:0,27,255	0/0:34,2:36:0,70,255	0/1:19,7:27:57,0,255
-chr21	31979109	chr21:31979109:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:26:222,0,255	0/0:26,0:30:0,89,255	1/1:0,16:19:255,47,0
-chr21	31979516	chr21:31979516:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:1:12,3,0	0/0:0,0:1:0,3,14	1/1:0,4:4:117,12,0
-chr21	31989714	chr21:31989714:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:11:83,0,120	0/0:12,0:12:0,36,255	1/1:0,8:11:233,27,0
-chr21	31995159	chr21:31995159:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:6,0,11	1/1:0,0:4:24,6,0	1/1:0,3:3:49,9,0
-chr21	32001654	chr21:32001654:M	TGTGTGTGTGTGTGTGTGTG	<11>	.	.	Motif=TG	GT:AD:DP:PL	0/1:20,10:30:104,0,255	0/0:36,0:36:0,106,255	1/1:0,45:45:255,133,0
-chr21	32005669	chr21:32005669:M	AAAAAAAACAAAAAAACAAAAACAAAAAAAAA	<26>,<38>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,14:31:255,255,255,255,0,255	1/2:0,14,11:25:255,255,236,255,0,255	2/2:0,0,16:16:255,255,255,48,48,0
-chr21	32007938	chr21:32007938:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:57,6,0	1/1:0,0:3:3,1,0	1/1:0,7:8:199,21,0
-chr21	32008238	chr21:32008238:M	AAAACAAAACAAAACAAAACAAA	<2.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,50:50:255,150,0	1/1:0,32:32:255,96,0	1/1:0,35:35:255,105,0
-chr21	32013127	chr21:32013127:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,37:39:255,96,0	0/1:21,18:42:216,0,255	1/1:1,27:30:255,70,0
-chr21	32020058	chr21:32020058:M	CAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATACAATA	<15>,<16>,<17>	.	.	Motif=CAATA	GT:AD:DP:PL	1/2:0,3,3,0:6:126,54,38,47,0,38,109,47,55,126	0/1:3,6,0,0:9:78,0,26,87,52,165,103,52,182,236	2/3:0,0,3,3:6:158,131,122,53,53,36,53,45,0,36
-chr21	32029559	chr21:32029559:M	ACACACACACACACACACACACACACACACA	<13.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:12,0,15:27:195,231,255,0,217,142	1/2:0,7,14:21:255,203,182,120,0,60	0/0:20,1,0:21:0,33,255,50,255,255
-chr21	32034249	chr21:32034249:M	TTTTTTTTTTTTTTT	<11>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,10,0:18:251,0,182,255,147,255	1/2:0,11,9:20:255,157,206,255,0,255	0/0:18,0,0:18:0,54,255,53,255,255
-chr21	32044874	chr21:32044874:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,1,3:7:31,34,100,0,26,43	1/2:1,4,1:8:69,2,7,71,0,118	0/2:1,0,2:4:34,43,76,0,14,5
-chr21	32046185	chr21:32046185:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,28:43:255,0,159	0/1:24,18:42:201,0,255	0/0:30,0:30:0,89,255
-chr21	32046565	chr21:32046565:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:25:147,0,255	0/1:13,12:26:244,0,255	0/0:38,0:41:0,117,255
-chr21	32048116	chr21:32048116:M	ACACACAGACACACACACACACACACACACAGACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,16:32:212,0,185	0/1:17,15:33:167,0,212	0/0:31,1:32:0,76,255
-chr21	32049955	chr21:32049955:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:18:76,0,150	0/0:26,1:27:0,62,255	0/1:20,19:40:225,0,252
-chr21	32053344	chr21:32053344:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18,5:45:255,0,255,246,255,255	0/2:14,2,8:25:85,84,255,0,216,183	2/2:1,3,21:25:255,255,255,55,19,0
-chr21	32069592	chr21:32069592:M	TATCTATCTCTATCTACCTACCTACCTATCAATCTAT	<11.2>	.	.	Motif=TATC	GT:AD:DP:PL	0/1:17,20:47:255,0,255	0/0:22,0:30:0,66,255	0/1:12,15:33:255,0,217
-chr21	32077210	chr21:32077210:M	ACACACACCACAACACACACACATACACACACACACACACACACACACACACACACACACACACAC	<36>	.	.	Motif=AC	GT:AD:DP:PL	.	1/1:0,4:4:104,12,0	1/1:0,3:3:79,9,0
-chr21	32078377	chr21:32078377:M	TATTTATTTATTTATTTATTTATTTAT	<9.8>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,10:26:204,0,255	0/0:34,0:35:0,94,255	0/1:14,13:27:255,0,255
-chr21	32080091	chr21:32080091:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,10:31:95,0,255	0/0:31,1:37:0,87,255	0/1:20,9:31:73,0,255
-chr21	32080732	chr21:32080732:M	TCTCTCTCTCTTTCCTTCTTTCTCCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTCTCTCTCTCTCTCTCT	<4.5>,<32>,<37>	.	.	Motif=TC	GT:AD:DP:PL	2/3:0,1,3,2:7:94,75,94,25,23,37,74,50,0,68	1/3:0,3,0,3:7:98,38,65,107,74,142,68,0,69,59	2/3:0,2,6,5:17:202,171,224,73,85,114,144,99,0,126
-chr21	32086693	chr21:32086693:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:13:21,0,120	0/0:9,0:11:0,32,172	0/1:11,4:16:22,0,154
-chr21	32092087	chr21:32092087:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:17,0,122	0/1:5,2:8:13,0,63	0/0:11,1:13:0,21,181
-chr21	32096335	chr21:32096335:M	TTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,12,98	0/1:10,4:16:49,0,207	0/1:7,6:15:104,0,131
-chr21	32098421	chr21:32098421:M	CTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<7.8>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:4,2:6:36,0,98	1/1:0,3:4:97,12,0	0/0:3,0:4:0,11,97
-chr21	32108422	chr21:32108422:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:13:96,0,51	1/1:1,7:11:126,13,0	0/1:1,2:4:23,0,18
-chr21	32109144	chr21:32109144:M	AACAAAAACAAAAAAAAAAC	<3.7>	.	.	Motif=AACAAA	GT:AD:DP:PL	0/1:15,16:32:255,0,255	1/1:0,35:38:255,107,0	0/1:27,19:46:255,0,255
-chr21	32110501	chr21:32110501:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,20,12:33:255,185,121,255,0,255	1/2:0,12,19:32:255,255,237,206,0,118	1/1:0,46,1:50:255,144,0,255,126,255
-chr21	32115837	chr21:32115837:M	TATATATATATCATATATATAATATACATTATATTATTATATATAATAATATAT	<29>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,6:11:105,0,83	0/1:1,1:2:17,0,17	0/0:11,0:11:0,33,254
-chr21	32119419	chr21:32119419:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:27:255,75,0	1/1:1,22:24:255,50,0	1/1:1,27:30:255,69,0
-chr21	32120646	chr21:32120646:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,14:27:179,0,117	0/1:9,11:21:136,0,91	1/1:0,31:34:255,99,0
-chr21	32121018	chr21:32121018:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:10:43,0,60	0/0:10,1:11:0,15,152	0/1:6,8:16:92,0,76
-chr21	32125166	chr21:32125166:M	TTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:22:255,29,0	0/1:3,16:21:255,0,39	1/1:0,22:25:255,73,0
-chr21	32126948	chr21:32126948:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,2:7:113,29,17,61,0,47	0/1:3,4,0:8:95,0,60,73,49,103	1/2:1,2,4:7:86,41,58,17,0,14
-chr21	32130074	chr21:32130074:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:14:255,33,0	1/1:1,9:12:233,5,0	1/1:0,17:18:255,51,0
-chr21	32133461	chr21:32133461:M	AAACAAACAAACAAACAAACAAACAAACAGACAAACA	<10.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:11,11:22:147,0,148	0/1:12,6:18:56,0,165	0/0:32,0:32:0,95,255
-chr21	32144785	chr21:32144785:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,2:23:0,9,255	0/1:11,12:28:242,0,251	1/1:0,15:19:255,50,0
-chr21	32147949	chr21:32147949:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:41,0,41	0/1:3,2:7:48,0,61	1/1:0,5:7:133,14,0
-chr21	32157028	chr21:32157028:M	TTTCCTTTCTTTTCCTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<8.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:2,8:10:122,0,9	1/1:0,7:8:139,23,0	0/1:6,2:8:14,0,90
-chr21	32158472	chr21:32158472:M	TTTTTTTTTTTTTTCTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,29:48:255,0,200	0/1:15,10:25:102,0,189	1/1:0,34:34:255,100,0
-chr21	32160286	chr21:32160286:M	ACACACACACACACACACACACACACACACACACACACACACACACATACAC	<19>,<20>	.	.	Motif=AC	GT:AD:DP:PL	0/2:9,0,13:22:255,229,255,0,237,199	0/2:6,0,10:16:246,168,255,0,154,124	1/2:0,12,17:30:255,255,210,217,0,133
-chr21	32160650	chr21:32160650:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,14:24:189,0,115	0/1:11,15:26:187,0,117	0/1:16,12:29:141,0,205
-chr21	32161471	chr21:32161471:M	TTGTTTTTTGTTTGTTTGTTTGTTTGTTTGTTGTTT	<10>,<11>	.	.	Motif=TTGT	GT:AD:DP:PL	0/2:10,0,14:24:255,255,255,0,190,216	0/1:8,13,0:21:175,0,84,199,144,255	0/2:20,0,13:33:255,239,255,0,255,255
-chr21	32165433	chr21:32165433:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:41:0,116,255	0/1:24,8:34:43,0,255	0/1:14,11:30:121,0,203
-chr21	32175809	chr21:32175809:M	CAAAAAAAACAAAAACAAAAACAAAACAA	<6>	.	.	Motif=CAAAA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:30,0:30:0,90,255	0/1:11,19:30:255,0,166
-chr21	32177898	chr21:32177898:M	CTTTTTTTTTCTTTTGTTTTCTTTTCTTTTTTTT	<5.8>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/0:27,0:27:0,79,255	1/1:0,11:11:205,32,0
-chr21	32179440	chr21:32179440:M	CACACACACACACA	<6>	.	.	Motif=CA	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/0:37,0:37:0,109,255	0/1:24,22:46:255,0,255
-chr21	32188004	chr21:32188004:M	TCTCTCTCTCTCTCTCTGTCCCTTTCTCTCTCTCTC	<22>	.	.	Motif=TC	GT:AD:DP:PL	0/0:29,0:31:0,89,255	0/0:25,0:28:0,80,255	0/1:14,6:21:98,0,255
-chr21	32193467	chr21:32193467:M	GATAGATAGATAGGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATAGAT	<14.8>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:8,11:20:120,0,72	1/1:0,10:10:153,29,0	0/0:14,0:22:0,48,239
-chr21	32196460	chr21:32196460:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:3:0,9,54	0/1:6,3:9:25,0,76	0/0:8,1:9:0,9,122
-chr21	32200430	chr21:32200430:M	TTTTTCTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,1:17:0,32,255	0/0:21,1:23:0,50,255	0/1:9,6:16:62,0,115
-chr21	32209156	chr21:32209156:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,0:43:0,126,255	0/0:40,0:42:0,123,255	0/1:21,21:44:255,0,255
-chr21	32236211	chr21:32236211:M	AAAAAAAAAAAAATACAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:24:0,53,255	0/0:19,0:19:0,56,255	0/1:8,14:23:197,0,79
-chr21	32240770	chr21:32240770:M	TGGTTTTGGTTTT	<2.3>	.	.	Motif=TGGTTT	GT:AD:DP:PL	1/1:1,32:34:255,81,0	1/1:0,29:29:255,80,0	1/1:0,44:44:255,122,0
-chr21	32258835	chr21:32258835:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<9>,<10>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:12,8,0:20:133,0,236,103,157,210	0/2:9,0,9:19:69,86,255,0,108,67	0/1:8,8,0:16:145,0,148,102,103,165
-chr21	32268930	chr21:32268930:M	TTTTTTTTTTCTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,4:35:0,29,255	0/0:17,0:17:0,50,255	0/1:11,11:22:134,0,134
-chr21	32270263	chr21:32270263:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,0:34:0,100,255	0/0:31,0:32:0,94,255	0/1:16,19:37:240,0,191
-chr21	32280506	chr21:32280506:M	TTTTTTTTTTCTTTTCTTTATTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:23,0:23:0,68,255	0/1:14,18:33:242,0,181
-chr21	32287244	chr21:32287244:M	CACACACACACACACACACACACACACACACACAC	<18.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,17:31:182,0,134	1/1:4,29:34:255,36,0	0/0:39,0:41:0,118,255
-chr21	32295976	chr21:32295976:M	AAAAAACAAAACAAAACAAAACAAAAAACAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:21,29:50:255,0,255	0/0:23,0:23:0,69,255
-chr21	32301030	chr21:32301030:M	ATATCAAATATATCATATGATATATATCATATCATATATCCATATATATCATGATATATCGTATATGATATCATAT	<12>	.	.	Motif=ATATC	GT:AD:DP:PL	0/0:10,1:13:0,5,244	0/1:12,4:16:61,0,255	0/1:9,3:15:48,0,207
-chr21	32302980	chr21:32302980:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,3,2:15:44,8,99,0,83,173	0/0:15,0,0:16:0,46,254,48,255,255	1/2:0,3,4:10:164,90,69,42,0,21
-chr21	32304613	chr21:32304613:M	CAAACAAAAAAAAACAAACAAAAAACAAAACAAAACAAACAAACAAACAAAACAAAC	<13.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:11,6:27:35,0,77	0/0:18,0:31:0,34,186	1/1:0,27:38:255,83,0
-chr21	32304954	chr21:32304954:M	TTTTTTTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:8:67,0,12	0/0:1,0:1:0,3,17	1/1:0,11:11:192,32,0
-chr21	32315315	chr21:32315315:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,12:34:123,0,223	0/1:11,4:18:15,0,162	0/1:6,18:25:244,0,30
-chr21	32329107	chr21:32329107:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:34:255,78,0	1/1:1,22:24:255,52,0	1/1:2,27:29:255,49,0
-chr21	32330198	chr21:32330198:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:5:87,0,16,88,17,101	1/1:0,5,0:9:198,24,0,184,22,177	0/2:2,0,4:7:50,56,147,0,23,16
-chr21	32332478	chr21:32332478:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,10:14:255,33,0	1/1:0,11:14:255,33,0
-chr21	32332508	chr21:32332508:M	AAAAAAACAAAAGACAAAAAAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,2:10:0,0,56	0/1:2,4:7:29,0,16	0/0:7,1:11:0,16,93
-chr21	32332555	chr21:32332555:M	AAAAAAACAAAAGACAAAAAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5,1:7:67,8,0,48,5,58	2/2:0,0,3:3:76,47,39,9,8,0	1/1:0,3,1:5:40,1,0,19,1,39
-chr21	32333103	chr21:32333103:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:39:248,0,255	1/1:1,36:37:255,91,0	0/0:53,1:54:0,141,255
-chr21	32342038	chr21:32342038:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,45:46:255,117,0	1/1:0,35:35:255,102,0	1/1:0,40:40:255,116,0
-chr21	32357315	chr21:32357315:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:19:0,28,255	0/1:17,6:24:33,0,217	0/0:14,2:17:0,15,215
-chr21	32369976	chr21:32369976:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:4:22,0,22	0/0:6,0:6:0,17,98	1/1:1,7:8:100,6,0
-chr21	32376807	chr21:32376807:M	TTTGTTTTGTTTGTTTGTTTGTTTGTTTGTTT	<9>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:12,14:26:192,0,154	0/0:32,0:33:0,97,255	1/1:0,35:35:255,103,0
-chr21	32381427	chr21:32381427:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:35:237,0,185	1/1:2,32:36:255,70,0	0/0:24,3:27:0,26,255
-chr21	32384987	chr21:32384987:M	GAAAGAAAAGAAAAGAAAAGAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	<11.8>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:12,10:22:128,0,167	1/1:0,14:14:253,41,0	0/0:22,0:22:0,65,255
-chr21	32387601	chr21:32387601:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,6:8:95,6,0	1/1:1,9:13:152,17,0	1/1:0,9:9:153,26,0
-chr21	32391370	chr21:32391370:M	AAAAAAAAAAGAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,16:40:193,0,255	1/1:0,29:31:255,90,0	0/0:35,0:37:0,108,255
-chr21	32391857	chr21:32391857:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,10:17:132,0,77	0/1:4,19:25:255,0,6	0/0:30,1:31:0,74,255
-chr21	32397699	chr21:32397699:M	AAAAAAAAAAAAAAAAAAAAGAGAAAAGAAAAAAGAAAAAAAAA	<45>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:5:37,0,20	1/1:0,2:3:34,7,0	0/0:7,0:9:0,26,139
-chr21	32403009	chr21:32403009:M	AAAAAAAAAAGAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,19:35:255,0,199	1/1:1,43:44:255,112,0	0/0:39,0:40:0,118,255
-chr21	32404234	chr21:32404234:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,6:20:98,0,255	1/1:0,13:15:255,42,0	0/0:14,0:18:0,47,255
-chr21	32404797	chr21:32404797:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:3:29,0,19	1/1:0,9:10:255,30,0	0/0:1,0:1:0,3,26
-chr21	32406053	chr21:32406053:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:124,0,11	1/1:0,11:13:255,39,0	0/0:0,0:1:0,1,2
-chr21	32416305	chr21:32416305:M	TTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTCTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,3:18:0,0,216	0/1:7,6:13:64,0,81	0/0:12,2:17:0,12,194
-chr21	32422045	chr21:32422045:M	AAAAAAAAAAAAAAAAAAA	<18>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,3:10:56,76,165,0,102,140	2/2:0,0,2:5:93,94,96,14,14,0	0/1:7,6,0:14:75,0,80,113,120,255
-chr21	32423071	chr21:32423071:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:1:27,3,0	1/1:0,6:9:202,24,0	.
-chr21	32425151	chr21:32425151:M	AAACAAACAAACAAACAAACAA	<7.5>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:17,9:30:167,0,255	1/1:0,32:34:255,98,0	0/0:38,0:38:0,114,255
-chr21	32425963	chr21:32425963:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,20:41:255,0,250	1/1:0,34:34:255,100,0	0/0:40,0:42:0,123,255
-chr21	32427856	chr21:32427856:M	AAAAAAAAAAAAAAAAAAAAAA	<19>,<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4,0,0:5:138,15,0,96,15,84,135,15,96,133	1/2:0,7,4,0:12:255,68,33,129,0,96,255,57,128,249	3/3:1,1,0,12:14:194,202,255,186,228,209,21,12,29,0
-chr21	32434594	chr21:32434594:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<6.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,9:19:198,0,223	1/1:0,10:11:255,30,0	0/0:13,0:13:0,39,255
-chr21	32438487	chr21:32438487:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:16,0,51	1/1:0,4:4:65,12,0	0/1:2,3:5:35,0,19
-chr21	32442664	chr21:32442664:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:23:105,0,148	0/1:4,7:11:87,0,36	0/1:13,4:18:17,0,185
-chr21	32444054	chr21:32444054:M	ACACACACACACACACACACACACACACACACACACACA	<16.5>,<18>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,9,14:24:255,255,255,242,0,190	2/2:0,0,30:32:255,255,255,96,87,0	0/1:8,14,0:23:255,0,180,255,203,255
-chr21	32447533	chr21:32447533:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:255,0,199	1/1:1,32:35:255,84,0	0/0:34,0:36:0,105,255
-chr21	32450384	chr21:32450384:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,19:30:255,0,106	1/1:2,26:28:255,47,0	0/0:32,0:36:0,104,255
-chr21	32463727	chr21:32463727:M	AAACAAAACAAAACAAAAAAAA	<4.2>	.	.	Motif=AAACA	GT:AD:DP:PL	0/1:25,17:42:255,0,255	1/1:0,44:44:255,131,0	0/0:44,1:45:0,112,255
-chr21	32463782	chr21:32463782:M	AAAAAAAGAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,20:39:255,0,247	1/1:0,45:45:255,132,0	0/0:51,0:51:0,150,255
-chr21	32466825	chr21:32466825:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,21:34:255,0,132	1/1:2,27:30:255,52,0	0/0:31,3:34:0,46,255
-chr21	32467906	chr21:32467906:M	ATATATATATATATATCCTATATATAT	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,15:41:112,0,227	1/1:0,16:17:228,46,0	0/0:31,0:32:0,89,255
-chr21	32470735	chr21:32470735:M	TCTTTCTTTCTTTCTTTTTCTTTTTCTTTCTTT	<8.5>	.	.	Motif=TCTT	GT:AD:DP:PL	0/0:16,6:32:0,7,29	1/1:0,13:26:44,17,0	0/0:20,0:27:0,29,71
-chr21	32471317	chr21:32471317:M	TTTTTTTCTTTTTTCTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,30,255	1/1:0,10:12:255,33,0	0/0:18,0:19:0,57,255
-chr21	32472155	chr21:32472155:M	ATTTATTTATTTATTTATTT	<3>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:1,3:5:61,0,12	0/0:41,0:41:0,123,255
-chr21	32472638	chr21:32472638:M	AAAAGAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:41:255,0,214	1/1:0,47:47:255,138,0	0/0:27,1:28:0,65,255
-chr21	32475341	chr21:32475341:M	ATCATCATCATCATCATCATCATCATCAT	<10.7>	.	.	Motif=ATC	GT:AD:DP:PL	0/1:16,19:35:255,0,206	1/1:2,30:32:255,58,0	0/0:29,1:31:0,72,255
-chr21	32475880	chr21:32475880:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<13.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/1:0,9:9:172,27,0	.	0/1:14,13:27:162,0,181
-chr21	32479848	chr21:32479848:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:32:196,0,205	1/1:0,30:31:255,91,0	0/0:45,1:47:0,120,255
-chr21	32480303	chr21:32480303:M	AAAAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:19:0,56,255	1/1:0,3:3:82,9,0	0/0:34,0:38:0,113,255
-chr21	32480962	chr21:32480962:M	AAAAAAAAAAAAATAAATAAAAATAAAATAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:165,0,184	1/1:0,23:23:255,68,0	0/0:16,2:18:0,16,255
-chr21	32481510	chr21:32481510:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:35:255,0,170	1/1:2,31:35:255,67,0	0/0:32,4:36:0,32,255
-chr21	32482855	chr21:32482855:M	TTTTTTTTTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:12:0,35,255	0/0:6,0:7:0,19,175	0/1:3,27:32:255,0,11
-chr21	32483963	chr21:32483963:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,8:24:255,108,191,255,0,255	1/1:0,31,0:31:255,93,0,255,93,255	0/2:12,1,8:21:84,114,255,0,184,155
-chr21	32488588	chr21:32488588:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,19:40:246,0,255	1/1:1,28:30:255,68,0	0/0:30,1:34:0,81,255
-chr21	32492700	chr21:32492700:M	TTTTCTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,24:40:255,0,185	1/1:2,32:35:255,66,0	0/0:36,2:39:0,78,255
-chr21	32493771	chr21:32493771:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<9.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,10,10:20:255,166,136,191,0,135	1/1:0,19,0:19:255,57,0,255,56,255	0/2:12,0,7:19:76,112,255,0,223,171
-chr21	32494782	chr21:32494782:M	AAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:32:231,0,255	1/1:0,11:13:255,38,0	0/0:30,0:33:0,98,255
-chr21	32498440	chr21:32498440:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:16:41,0,121	1/1:1,9:12:152,17,0	0/0:18,0:18:0,53,255
-chr21	32500191	chr21:32500191:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:107,12,0	1/1:0,7:8:218,24,0	0/0:2,0:2:0,6,72
-chr21	32500818	chr21:32500818:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10:26:110,0,222	1/1:1,28:30:255,70,0	0/0:41,0:41:0,121,255
-chr21	32513167	chr21:32513167:M	TTATTTTATTTTATTTATTTATTTT	<4.8>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:10,6:16:81,0,168	0/0:24,0:24:0,72,255
-chr21	32513541	chr21:32513541:M	TTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0:7:0,21,188	0/1:3,4:8:79,0,59	0/0:11,0:11:0,33,255
-chr21	32516184	chr21:32516184:M	TTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:21:0,63,255	0/1:5,11:22:255,0,126	0/0:13,0:17:0,51,255
-chr21	32519455	chr21:32519455:M	ACACACACAAACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<30>	.	.	Motif=AC	GT:AD:DP:PL	0/2:4,0,3:7:31,51,184,0,68,48	0/1:2,5,0:9:129,0,44,137,42,173	0/2:7,0,2:9:7,34,236,0,117,92
-chr21	32523066	chr21:32523066:M	TAAAAATAAAAA	<2.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	0/0:53,0:54:0,160,255	0/1:17,17:34:255,0,255	0/0:40,0:40:0,120,255
-chr21	32531819	chr21:32531819:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	<1.8>,<4.8>	.	.	Motif=AGGG	GT:AD:DP:PL	1/2:0,0,1:3:59,26,19,19,0,11	1/2:0,3,7:12:255,191,168,84,0,55	1/2:0,0,1:5:58,42,38,9,0,0
-chr21	32540787	chr21:32540787:M	AAAAAAAAAACAAACAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,64,255	0/1:10,16:26:191,0,91	0/0:26,1:28:0,65,255
-chr21	32545033	chr21:32545033:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:12:0,6,154	0/1:6,7:14:92,0,64	0/0:16,2:20:0,8,251
-chr21	32553744	chr21:32553744:M	AAAAAAAAAAAGAAAAGAAAAAAAGAAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:0,20:21:255,61,0	1/1:0,25:25:255,74,0
-chr21	32560849	chr21:32560849:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:52,0:52:0,154,255	0/1:26,28:55:255,0,255	0/0:49,1:52:0,134,255
-chr21	32567198	chr21:32567198:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<8.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/0:16,0:17:0,51,255	0/1:6,8:14:181,0,127	0/0:20,0:20:0,60,255
-chr21	32572220	chr21:32572220:M	GTTTTTTTTGTTTTGTTTTGTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTT	<10.6>	.	.	Motif=GTTTT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:10,18:28:255,0,160	0/0:15,0:15:0,45,255
-chr21	32572428	chr21:32572428:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:39:0,112,255	0/1:17,11:29:216,0,255	0/0:33,0:33:0,99,255
-chr21	32580477	chr21:32580477:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,3:14:47,0,244	0/1:3,3:10:61,0,76	0/0:12,0:18:0,45,255
-chr21	32582567	chr21:32582567:M	TTTCTTTCTTCTTTCTTTCCTTTCTTTCTTTCTTTTCTTTTCTTTTTTC	<13.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:10,11:21:137,0,119	0/0:24,0:24:0,71,255
-chr21	32586207	chr21:32586207:M	GTGTGTGTGTGTGTCCTGAGGTGTGCGAGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:25,0:28:0,72,255	0/1:12,6:20:38,0,126	0/0:16,0:20:0,46,242
-chr21	32590335	chr21:32590335:M	GAGAAAGAGAAAGAAAAAGAAAGAAAGAGGAAAGAAAGAGAGAGAGAGAAAGA	<8.2>	.	.	Motif=GAGAAA	GT:AD:DP:PL	0/0:23,0:24:0,69,255	0/1:10,6:16:114,0,223	0/0:20,0:24:0,60,255
-chr21	32598546	chr21:32598546:M	TTTTTTTTTTCTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,2:16:3,0,255	0/1:4,6:10:123,0,79	0/0:9,1:10:0,4,214
-chr21	32608225	chr21:32608225:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:8:54,0,24	0/1:3,2:7:21,0,36	0/1:5,2:9:18,0,54
-chr21	32614237	chr21:32614237:M	TTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:6:0,17,140	0/1:3,11:15:255,0,57	0/0:5,0:6:0,18,160
-chr21	32625344	chr21:32625344:M	ATTTTTTTATTTTATTTATTTATTTATT	<6.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:15,24:39:255,0,237	0/0:28,0:28:0,84,255
-chr21	32627525	chr21:32627525:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:26,0,9	0/1:1,4:5:52,0,2	0/0:4,0:6:0,15,80
-chr21	32637394	chr21:32637394:M	TTTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,90	1/1:0,7:9:98,4,0	0/0:6,1:8:0,5,97
-chr21	32667112	chr21:32667112:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:53,0:54:0,159,255	0/1:23,22:47:250,0,255	0/0:52,0:53:0,156,255
-chr21	32668010	chr21:32668010:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:7,0,21:30:255,255,255,0,117,29	1/2:1,14,10:29:255,151,238,255,0,255	1/2:0,23,9:32:255,145,171,255,0,255
-chr21	32674624	chr21:32674624:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,29:30:255,255,255,88,70,0	1/2:0,20,11:33:255,163,98,255,0,255	2/2:2,1,30:33:255,255,255,60,78,0
-chr21	32697499	chr21:32697499:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:18,17:38:206,0,215	0/0:18,3:23:0,12,255
-chr21	32722190	chr21:32722190:M	AAAAAAAAAAAAAAAAA	<11>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,1:7:1,21,177,0,124,108	1/2:0,5,3:8:189,63,64,133,0,124	0/0:6,0,0:7:0,21,186,21,158,145
-chr21	32744261	chr21:32744261:M	AAAAAAAAAAAAAAAAGAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,7:11:149,0,23	0/1:6,7:18:130,0,129	0/1:7,8:22:163,0,125
-chr21	32755128	chr21:32755128:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,27:31:255,19,0	1/1:1,28:33:255,78,0	1/1:1,42:45:255,114,0
-chr21	32758645	chr21:32758645:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,2:15:0,8,180	0/1:5,5:12:73,0,50	0/1:6,1:11:3,0,95
-chr21	32760888	chr21:32760888:M	TGTGTGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,19:20:255,56,0	0/1:8,12:20:147,0,78	1/1:0,16:16:255,47,0
-chr21	32763995	chr21:32763995:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:15:1,0,149	0/1:10,11:22:127,0,100	0/0:16,1:19:0,28,253
-chr21	32775615	chr21:32775615:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:24:255,16,0	1/1:2,17:19:255,21,0	1/1:0,9:11:182,32,0
-chr21	32777563	chr21:32777563:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:20:30,0,209	0/0:17,1:20:0,41,255	0/1:15,4:20:12,0,212
-chr21	32780407	chr21:32780407:M	AAAAAGAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:27:255,78,0	0/1:3,21:26:255,0,2	1/1:0,26:30:255,83,0
-chr21	32784925	chr21:32784925:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,40:40:255,118,0	1/1:1,39:40:255,100,0
-chr21	32792904	chr21:32792904:M	TTATTATTATTATT	<5>,<6.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:1,6,37:47:255,255,255,14,0,5	1/2:0,10,30:40:255,255,255,38,0,55	1/2:0,10,33:43:255,255,255,38,0,47
-chr21	32792916	chr21:32792916:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,38:43:255,84,0	1/1:0,29:31:255,78,0	1/1:0,30:35:255,80,0
-chr21	32800804	chr21:32800804:M	AAAAAAACAAAAAAAAAACCAAAAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,13:13:255,39,0	1/1:0,28:28:255,84,0
-chr21	32804276	chr21:32804276:M	TATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,19:19:255,56,0	1/1:1,34:35:255,85,0
-chr21	32805361	chr21:32805361:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,28:30:255,89,0	1/1:1,28:29:255,60,0
-chr21	32807335	chr21:32807335:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:152,18,0	1/1:0,10:11:255,33,0	1/1:0,5:7:167,20,0
-chr21	32809183	chr21:32809183:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:2,7,1,6:16:239,141,149,173,87,255,87,0,196,198	1/2:0,6,3,0:11:179,84,61,102,0,149,161,52,166,222	3/3:0,0,0,7:7:223,223,222,141,141,121,21,21,21,0
-chr21	32809266	chr21:32809266:M	TCCCTCCCTCC	<3.8>	.	.	Motif=TCCC	GT:AD:DP:PL	1/1:0,25:25:255,70,0	1/1:0,14:16:187,42,0	1/1:0,22:22:255,61,0
-chr21	32810247	chr21:32810247:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:100,12,0	1/1:0,2:2:58,6,0	1/1:0,2:2:58,6,0
-chr21	32810422	chr21:32810422:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:12:47,0,73	0/1:7,2:9:7,0,91	0/0:8,0:8:0,23,138
-chr21	32820387	chr21:32820387:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,4:25:19,0,255	0/0:18,2:21:0,3,255	0/1:15,6:23:80,0,255
-chr21	32823072	chr21:32823072:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:11,8:20:177,0,249	1/1:0,7:7:193,21,0	0/0:29,0:29:0,87,255
-chr21	32826211	chr21:32826211:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,2:3:66,9,0	.
-chr21	32847782	chr21:32847782:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:23,19:42:244,0,255	1/1:0,37:39:255,114,0	0/0:45,0:45:0,133,255
-chr21	32861553	chr21:32861553:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:10:34,0,76	0/0:12,1:14:0,14,174	0/0:10,1:11:0,15,155
-chr21	32869647	chr21:32869647:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCTATCT	<13.8>,<16.8>	.	.	Motif=TCTA	GT:AD:DP:PL	0/2:14,0,10:24:255,255,255,0,255,255	1/2:0,7,13:20:255,255,255,128,0,206	0/0:24,0,0:24:0,71,255,72,255,255
-chr21	32887709	chr21:32887709:M	ACACACACACACACACACACACACACACACACACACACAC	<18>,<19>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,13:33:255,199,139,255,0,255	1/2:0,16,13:31:255,187,133,255,0,210	2/2:0,2,21:23:255,255,255,67,32,0
-chr21	32888296	chr21:32888296:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,20:42:255,0,255	1/1:0,54:54:255,159,0	0/0:47,0:47:0,139,255
-chr21	32890901	chr21:32890901:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,20:45:247,0,255	1/1:0,26:26:255,76,0	0/0:35,0:35:0,103,255
-chr21	32891062	chr21:32891062:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:34,0,124	0/0:13,1:14:0,24,207	0/1:8,5:13:50,0,104
-chr21	32901909	chr21:32901909:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:31:255,81,0	1/1:2,36:41:255,84,0	0/1:19,25:49:255,0,220
-chr21	32914140	chr21:32914140:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	0/1:19,27:48:255,0,196	0/1:26,16:42:168,0,255
-chr21	32918456	chr21:32918456:M	GGGGGGGGGGTGGGGGG	<19>,<20>	.	.	Motif=G	GT:AD:DP:PL	1/2:0,5,3:14:191,41,17,65,0,49	1/1:0,6,0:22:149,20,0,96,21,120	1/2:0,1,7:18:220,94,69,15,0,21
-chr21	32927053	chr21:32927053:M	GTGTGTGTGTGTGTGTATGTGTGTGTGTG	<13.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,49:49:255,144,0	0/1:18,16:34:201,0,237
-chr21	32930199	chr21:32930199:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:8:183,23,0	1/1:0,6:6:207,18,0	1/1:0,6:7:211,21,0
-chr21	32932474	chr21:32932474:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,4:41:0,47,255	0/1:17,17:35:205,0,195	0/0:33,4:38:0,39,255
-chr21	32933983	chr21:32933983:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:2:59,6,0	1/1:0,6:7:176,18,0	.
-chr21	32936125	chr21:32936125:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:15:0,43,231	0/1:11,4:15:17,0,121	0/0:13,1:15:0,25,182
-chr21	32936328	chr21:32936328:M	TATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:28,0:30:0,89,255	0/1:17,11:30:214,0,255	0/0:41,0:41:0,123,255
-chr21	32943260	chr21:32943260:M	TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTT	<6.8>,<9.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	2/2:1,0,11:14:195,228,255,16,36,0	2/2:0,0,20:24:255,255,255,59,60,0	1/2:0,10,8:18:255,150,195,255,0,255
-chr21	32944636	chr21:32944636:M	ACAACACAACACAACACAACACAACA	<7.2>	.	.	Motif=ACAAC	GT:AD:DP:PL	0/0:21,0:21:0,63,255	0/0:29,0:29:0,87,255	0/1:18,9:27:165,0,255
-chr21	32950893	chr21:32950893:M	TTTTTTTTTTTTTTTTTTTT	<17>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:1,0,4,7:12:187,176,252,87,133,102,53,60,0,36	2/3:0,0,4,15:19:255,255,255,211,252,199,67,57,0,12	1/3:3,15,2,4:27:255,22,81,255,68,255,255,0,255,255
-chr21	32965121	chr21:32965121:M	ACACACACACACACACACACATACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,22:35:255,0,144	0/0:33,0:33:0,97,255	0/1:24,23:48:255,0,255
-chr21	32967436	chr21:32967436:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:19:84,0,113	1/1:2,16:19:251,21,0	0/0:14,0:15:0,44,255
-chr21	32976555	chr21:32976555:M	CACACACACACACACATACACACACACACACACACACACACACA	<15>,<21>,<23>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,15,9,0:24:255,162,210,255,0,255,255,250,255,255	1/3:3,11,0,8:23:255,96,238,255,230,255,255,0,255,255	2/2:0,0,12,0:18:224,255,255,37,39,0,237,255,16,255
-chr21	32986251	chr21:32986251:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,7,4:12:255,69,37,124,0,102	0/1:8,6,1:17:132,0,199,84,207,255	1/2:0,7,4:12:255,67,35,121,0,99
-chr21	32999572	chr21:32999572:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,21:22:255,66,0	0/1:17,18:35:255,0,255	1/1:3,45:48:255,69,0
-chr21	32999586	chr21:32999586:M	ACACACACACACACACACACACACACACACACACTGCACACCACACACCACACACCACACACACAC	<28.5>,<29>,<30>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,3,8:12:255,230,207,139,129,105,62,26,0,29	1/3:0,7,0,9:17:255,222,185,236,144,189,184,0,86,146	2/3:0,0,10,7:21:255,255,217,120,89,59,209,84,0,158
-chr21	33001056	chr21:33001056:M	TTTTTTTTTTTTTTTTT	<13>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,19,9,0:30:255,164,191,255,0,255,255,249,255,255	2/3:2,0,12,10:25:255,255,255,143,255,232,185,255,0,255	1/2:2,16,12,0:35:255,186,255,255,0,255,255,255,255,255
-chr21	33002579	chr21:33002579:M	TTTATTTATTTATTT	<4.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:14,16:31:220,0,182	0/1:14,17:32:217,0,163	0/1:14,12:26:148,0,186
-chr21	33007081	chr21:33007081:M	TTTTTTTTTTTTTTTTT	<14>,<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,1,15,4:27:224,246,255,0,91,58,218,255,6,255	1/2:1,19,15,0:38:255,249,255,255,0,255,255,255,255,255	0/3:9,0,0,10:19:124,179,255,178,255,255,0,161,137,106
-chr21	33038352	chr21:33038352:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41,1:43:255,108,0,255,108,255	1/2:1,25,9:36:255,148,64,255,0,255	0/1:25,20,0:45:241,0,255,255,255,255
-chr21	33038431	chr21:33038431:M	TTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7,0:9:240,27,0,237,27,233	2/2:0,0,3:4:102,100,98,12,12,0	0/1:14,4,0:21:100,0,255,119,255,255
-chr21	33039575	chr21:33039575:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,36:40:255,255,255,98,111,0	1/2:2,16,14:37:255,211,255,255,0,255	0/2:21,0,16:39:174,255,255,0,255,255
-chr21	33045483	chr21:33045483:M	AAAAAGAAAAAGAAA	<22.5>	.	.	Motif=AAAAAG	GT:AD:DP:PL	0/1:24,11:37:32,0,255	0/0:26,6:33:0,21,255	0/0:30,10:45:0,1,255
-chr21	33045491	chr21:33045491:M	AAAGAAAGAAAGAGAGAGAGAGAAAGGAAGGACGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,11:11:115,29,0	1/1:0,6:6:63,16,0	1/1:0,10:10:105,26,0
-chr21	33049858	chr21:33049858:M	AAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,3:4:89,10,0	0/1:2,5:8:124,0,47
-chr21	33051155	chr21:33051155:M	TTTTGTTTTGTTTTGTTGTGTTTTGTTTTGTTTTGTTTTG	<4>,<6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,47,0:47:255,141,0,255,141,255	1/2:0,22,11:33:255,255,222,255,0,255	0/1:16,19,0:35:255,0,255,255,255,255
-chr21	33065862	chr21:33065862:M	AAAAAAAAAAAAGAGAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:35:0,102,255	0/0:29,1:32:0,76,255	0/1:17,25:44:255,0,185
-chr21	33065949	chr21:33065949:M	CACACACACACACACACACACACACACACACAC	<15.5>,<17.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,37,0:39:255,114,0,255,116,255	1/2:0,14,13:30:255,228,255,252,0,255	0/1:13,22,0:36:255,0,124,255,193,255
-chr21	33078677	chr21:33078677:M	AAAAGAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:37:255,71,0	1/1:1,29:31:255,73,0	0/1:18,19:38:235,0,225
-chr21	33080202	chr21:33080202:M	ATATATATATATTTTAATAAAATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	0/1:25,14:40:255,0,255	0/1:5,2:7:47,0,104	0/1:12,7:19:176,0,242
-chr21	33082426	chr21:33082426:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<10.7>,<15.7>	.	.	Motif=TTA	GT:AD:DP:PL	2/2:0,0,9:9:171,195,255,27,27,0	1/2:0,3,2:6:108,35,46,78,0,72	0/2:7,0,6:13:73,110,255,0,128,91
-chr21	33083496	chr21:33083496:M	TTTTTCTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,10:11:162,15,0	0/0:9,1:10:0,12,137	0/1:7,10:18:124,0,80
-chr21	33085354	chr21:33085354:M	CTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTTTCTCTCT	<19>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,15:16:255,47,0	0/1:15,23:38:255,0,163
-chr21	33087286	chr21:33087286:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,23:25:255,37,0	1/1:2,19:22:255,29,0	0/1:12,17:31:219,0,147
-chr21	33090078	chr21:33090078:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:30,0,137	0/0:7,0:10:0,26,143	0/1:15,2:20:12,0,204
-chr21	33091444	chr21:33091444:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTG	<6>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:32,1:33:0,78,255	0/1:16,16:32:197,0,197	0/1:22,19:41:237,0,255
-chr21	33096191	chr21:33096191:M	TTTTTCTTTTTTTCTTTTTTTTTCTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:28:255,0,181	0/1:13,13:26:229,0,226	0/1:11,15:26:255,0,184
-chr21	33096218	chr21:33096218:M	TGTGGGTGTGTGTGTGTGTGTGTGTGTG	<15>	.	.	Motif=TG	GT:AD:DP:PL	1/1:3,36:40:255,64,0	1/1:2,31:36:255,71,0	1/1:1,28:30:255,70,0
-chr21	33096431	chr21:33096431:M	AAACAAAACAAACAAACAAA	<4>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:40,0:41:0,119,255	0/1:27,16:43:173,0,255
-chr21	33098011	chr21:33098011:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:2,1,18:21:255,255,255,26,43,0	1/2:2,6,10:19:255,103,139,65,0,50	0/2:7,1,12:20:167,157,255,0,103,63
-chr21	33102753	chr21:33102753:M	AAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAAAAAAA	<49>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:100,14,0	.	0/1:3,2:5:40,0,69
-chr21	33103773	chr21:33103773:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,7:11:147,111,149,63,0,71	2/2:1,1,9:11:114,127,202,5,3,0	2/2:1,1,9:12:128,141,221,7,5,0
-chr21	33103788	chr21:33103788:M	AGAGAGAGAGAGAGAGAGA	<10>,<11.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:3,10,5:19:113,59,37,41,0,199	1/2:0,8,17:28:255,255,228,58,0,90	0/2:13,6,6:26:70,52,78,0,44,255
-chr21	33105431	chr21:33105431:M	AAAAAAAAATAAAAAAATAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:1,19:20:255,41,0	0/1:19,15:34:179,0,254
-chr21	33107256	chr21:33107256:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:8:77,0,6	1/1:1,5:6:67,1,0	0/1:2,1:5:23,0,21
-chr21	33109001	chr21:33109001:M	TTTCTTTTCTTTTCTTTTCTTTTCTTTT	<3.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,34:34:255,102,0	0/1:14,26:40:255,0,255
-chr21	33112851	chr21:33112851:M	AAAAAGAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:39:255,115,0	1/1:2,34:36:255,70,0	0/1:22,32:54:255,0,242
-chr21	33118875	chr21:33118875:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,25:28:255,29,0	1/1:2,21:27:255,33,0	0/1:10,8:21:107,0,113
-chr21	33119648	chr21:33119648:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:3,33:36:255,53,0	0/1:23,24:47:255,0,255
-chr21	33124517	chr21:33124517:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:230,40,0	0/1:4,9:15:119,0,35	0/1:12,3:15:8,0,166
-chr21	33126872	chr21:33126872:M	TTTTTTTTGTTTTTTGGTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:156,26,0	1/1:1,7:9:111,9,0	0/1:0,4:7:51,0,4
-chr21	33126916	chr21:33126916:M	TATATATATATATATATATGTATA	<11>,<19>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,18:20:255,255,255,60,60,0	2/2:0,0,8:8:215,215,215,24,24,0	1/2:0,11,6:18:255,151,119,169,0,245
-chr21	33129284	chr21:33129284:M	TTATTTTATTATTATTATTATTATTATTATTATTATTATT	<11.3>,<16.3>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,14,7:21:255,183,141,255,0,255	2/2:0,0,1:1:29,29,29,3,3,0	1/2:0,19,7:26:255,184,127,255,0,255
-chr21	33135339	chr21:33135339:M	AAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,13,18:36:255,255,255,193,0,255	0/2:15,0,9:26:194,228,255,0,255,255	1/1:0,36,0:37:255,109,0,255,108,255
-chr21	33138253	chr21:33138253:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:32:255,94,0	0/1:16,14:31:154,0,198	0/1:12,19:31:251,0,124
-chr21	33147645	chr21:33147645:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:38:192,0,255	0/1:11,7:18:69,0,139	0/0:34,1:36:0,88,255
-chr21	33148646	chr21:33148646:M	AAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAAAAAAAGAAAAA	<44>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:6:35,0,36	0/1:3,2:5:19,0,36	0/0:6,0:6:0,18,104
-chr21	33151782	chr21:33151782:M	GAAGGAAGGAAAGGAGGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAGG	<3.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:3,14:21:255,0,53	0/1:1,8:11:189,0,10	0/1:3,15:19:255,0,25
-chr21	33153210	chr21:33153210:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,5:18:41,0,158	0/0:18,0:20:0,58,255	0/1:7,9:20:105,0,99
-chr21	33155034	chr21:33155034:M	AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG	<4.8>	.	.	Motif=AGGG	GT:AD:DP:PL	0/1:3,11:16:255,0,32	0/1:4,6:15:156,0,64	0/1:2,1:3:16,0,43
-chr21	33160384	chr21:33160384:M	ACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,22:42:255,0,255	0/1:30,19:50:255,0,255	0/0:52,0:52:0,156,255
-chr21	33161914	chr21:33161914:M	TCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTC	<24>,<29>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,8,8:17:255,209,184,219,0,195	0/1:6,7,0:13:163,0,137,181,155,255	0/2:7,0,9:16:205,229,255,0,180,151
-chr21	33164953	chr21:33164953:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,8:33:120,0,255	0/1:15,14:30:255,0,255	0/0:38,0:40:0,114,255
-chr21	33173737	chr21:33173737:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:6:0,15,84	0/0:1,0:1:0,3,16	0/1:6,3:9:23,0,72
-chr21	33179246	chr21:33179246:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:25:144,0,163	0/1:13,8:21:76,0,163	0/0:23,1:27:0,58,255
-chr21	33188370	chr21:33188370:M	TTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,11:27:223,0,255	0/1:13,7:21:139,0,255	0/1:20,5:28:64,0,255
-chr21	33191112	chr21:33191112:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,31:56:255,0,255	0/1:18,21:39:255,0,209	0/1:20,30:50:255,0,225
-chr21	33194740	chr21:33194740:M	AAAACAAAAAAAAAAAGGAAAAAGAAAAAGAAAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:15:59,0,125	0/1:14,15:29:180,0,161	0/1:10,14:24:184,0,112
-chr21	33195716	chr21:33195716:M	AAAAAAGAAAAAAAAAAAAAGAAAGAAAAAGAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:124,0,89	0/1:11,10:21:107,0,124	0/1:6,16:23:210,0,47
-chr21	33205242	chr21:33205242:M	TTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<38>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:9:44,0,43	0/0:4,1:6:0,1,60	0/1:3,1:5:13,0,36
-chr21	33205385	chr21:33205385:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,4:11:76,0,148	1/1:0,4:4:108,12,0	0/0:8,0:10:0,24,226
-chr21	33217093	chr21:33217093:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:22:78,0,185	0/1:12,11:28:106,0,171	0/0:25,2:31:0,54,255
-chr21	33217359	chr21:33217359:M	AAAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:5,0,7:15:162,125,255,0,150,129	0/2:3,3,15:22:255,203,240,0,34,32	0/1:2,10,1:15:255,0,24,165,41,194
-chr21	33222102	chr21:33222102:M	TTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5,1:7:198,0,8,70,9,79	1/2:0,3,1:4:135,17,5,50,0,38	0/2:1,0,4:6:129,68,122,0,57,43
-chr21	33224958	chr21:33224958:M	TTTTTTTGTTTTTTTTTTTTCTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:31:0,57,255	0/0:28,1:31:0,47,255	0/1:10,10:29:196,0,229
-chr21	33226687	chr21:33226687:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,1:21:0,43,255	0/1:11,4:15:23,0,140	0/0:6,0:8:0,17,102
-chr21	33229879	chr21:33229879:M	CCCCGCCCCTGGCTCCGCCCCCGCCCCCGC	<2>	.	.	Motif=CCCCGC	GT:AD:DP:PL	0/1:11,4:15:57,0,220	0/1:24,4:28:18,0,255	0/1:18,10:28:174,0,255
-chr21	33231006	chr21:33231006:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,0:50:0,147,255	0/1:22,17:39:189,0,255	0/1:18,29:48:255,0,202
-chr21	33232655	chr21:33232655:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:31:150,0,255	0/1:11,8:20:156,0,238	0/0:53,0:54:0,159,255
-chr21	33234184	chr21:33234184:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:22,0,0:22:0,66,255,66,255,255	0/1:11,8,0:21:161,0,255,130,255,255	0/2:12,0,7:22:141,115,255,0,255,255
-chr21	33237079	chr21:33237079:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<18>,<24>	.	.	Motif=GT	GT:AD:DP:PL	0/3:12,0,0,5:18:112,148,255,148,255,255,0,255,255,255	2/3:0,0,8,4:14:255,255,255,114,116,90,215,232,0,218	0/1:7,12,0,0:21:255,0,150,255,192,255,255,196,255,255
-chr21	33238775	chr21:33238775:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,18:42:214,0,255	0/1:21,12:35:111,0,255	0/1:26,21:48:255,0,255
-chr21	33240815	chr21:33240815:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,15,0:26:196,0,116,229,187,255	0/2:11,0,5:16:88,83,228,0,186,255	0/1:15,12,0:27:133,0,188,178,255,255
-chr21	33242753	chr21:33242753:M	GTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,4,7:12:255,177,162,119,0,98	1/2:0,2,5:7:184,129,123,55,0,40	1/1:0,9,0:10:255,30,0,255,30,255
-chr21	33246073	chr21:33246073:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:16,2:19:0,21,255	0/1:10,11:24:138,0,127
-chr21	33247255	chr21:33247255:M	TTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:53,0,213	0/0:8,1:10:0,6,192	.
-chr21	33249344	chr21:33249344:M	AAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5,0:6:128,0,11,87,25,99	0/1:2,6,0:8:146,0,33,99,49,131	1/2:0,6,6:14:255,103,66,110,0,76
-chr21	33252082	chr21:33252082:M	ATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<8.5>,<11.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/1:12,10,0:36:93,0,117,158,183,255	0/1:17,13,0:41:109,0,163,198,251,255	1/2:0,14,9:34:255,221,187,236,0,255
-chr21	33262764	chr21:33262764:M	CTCTCTCTCTCT	<7.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:0,25:30:255,14,0	1/1:0,32:38:255,3,0	0/1:11,13:25:169,0,152
-chr21	33262775	chr21:33262775:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:35:191,0,107	0/1:13,22:38:210,0,101	0/0:26,1:30:0,48,255
-chr21	33263855	chr21:33263855:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:14:54,0,89	0/1:7,7:17:82,0,94	1/1:1,15:18:255,34,0
-chr21	33267483	chr21:33267483:M	TTTTTTTTTTTGTTTGTTTGTTTTTTTGTTTTTTTGTTTTTTTTT	<44>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:58,0,3	1/1:0,9:9:156,26,0	0/1:1,4:6:61,0,1
-chr21	33269652	chr21:33269652:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:71,0,55	0/0:14,2:19:0,19,218	0/1:3,2:7:26,0,34
-chr21	33275148	chr21:33275148:M	TTTTCTTTTTTTTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,1,5:8:88,56,76,10,0,6	1/2:0,4,5:10:183,70,55,76,0,50	2/2:1,0,11:13:174,167,190,18,26,0
-chr21	33277335	chr21:33277335:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:24:255,63,0	1/1:1,11:15:255,9,0	1/1:1,21:26:255,41,0
-chr21	33277644	chr21:33277644:M	TTTTCTTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTT	<48>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:189,21,0	0/1:1,1:4:21,0,20	1/1:0,5:6:131,15,0
-chr21	33287342	chr21:33287342:M	GTTTGTTTGTTT	<4>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:15,17:32:234,0,196	0/1:20,14:34:153,0,255	1/1:0,40:40:255,118,0
-chr21	33288382	chr21:33288382:M	CACACACACACACACACACACACAGACAC	<12.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,11:24:239,0,198	0/1:9,7:19:165,0,180	1/1:0,26:27:255,78,0
-chr21	33293807	chr21:33293807:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,87,0	1/1:0,31:37:255,101,0	0/1:10,24:34:255,0,160
-chr21	33294370	chr21:33294370:M	TGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,10:19:112,0,88	0/1:13,9:22:80,0,144	0/1:11,12:23:130,0,113
-chr21	33295672	chr21:33295672:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,10:28:255,107,111,233,0,188	1/2:1,2,8:11:138,90,109,16,0,0	0/1:0,8,1:14:216,0,6,136,17,139
-chr21	33296954	chr21:33296954:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:15:255,45,0	1/1:0,8:12:243,30,0	0/1:9,11:24:245,0,194
-chr21	33297431	chr21:33297431:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:26,19:49:186,0,255	0/0:43,1:46:0,117,255	0/1:16,14:30:142,0,175
-chr21	33300442	chr21:33300442:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11,0:19:248,0,145,180,122,255	1/2:0,14,15:30:255,200,155,230,0,148	0/0:33,0,2:35:0,99,255,69,255,255
-chr21	33303351	chr21:33303351:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:9:146,0,15	0/1:1,2:5:58,0,28	0/1:2,1:4:21,0,50
-chr21	33319699	chr21:33319699:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,8:33:49,0,255	0/0:26,2:36:0,62,255	0/1:14,15:33:179,0,142
-chr21	33322075	chr21:33322075:M	ATATACATATGGAATATACATATA	<1.8>	.	.	Motif=ATATAC	GT:AD:DP:PL	0/0:24,2:26:0,22,255	0/0:19,2:21:0,7,255	1/1:0,26:26:255,78,0
-chr21	33322236	chr21:33322236:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:32,6:39:0,41,255	0/0:16,2:19:0,30,255	0/1:12,9:22:48,0,255
-chr21	33322290	chr21:33322290:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,6:44:0,58,255	0/0:14,2:16:0,23,255	0/1:17,9:26:34,0,255
-chr21	33322318	chr21:33322318:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:41,6:47:0,67,255	0/0:12,2:14:0,17,255	0/1:16,9:25:37,0,255
-chr21	33322939	chr21:33322939:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:40,5:45:0,73,255	0/0:6,1:7:0,9,150	0/1:6,11:17:86,0,122
-chr21	33322967	chr21:33322967:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:39,5:44:0,70,255	0/0:6,1:7:0,9,150	0/1:12,11:23:68,0,255
-chr21	33322995	chr21:33322995:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:47,5:52:0,94,255	0/0:6,1:7:0,9,150	0/1:18,11:29:50,0,255
-chr21	33323023	chr21:33323023:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:45,5:50:0,88,255	0/0:6,1:7:0,9,150	0/1:19,11:30:47,0,255
-chr21	33323051	chr21:33323051:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:38,5:43:0,67,255	0/0:4,1:5:0,3,98	0/1:15,11:26:59,0,255
-chr21	33323079	chr21:33323079:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:2,5:7:41,0,36	1/1:0,1:1:12,3,0	1/1:0,11:11:134,30,0
-chr21	33323107	chr21:33323107:M	ATATATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,5:8:38,0,61	0/1:1,1:2:6,0,22	1/1:0,10:10:122,28,0
-chr21	33326213	chr21:33326213:M	TTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,11:20:255,0,152	0/1:8,13:24:255,0,171	0/1:9,14:25:255,0,184
-chr21	33326786	chr21:33326786:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:43:0,125,255	0/0:38,0:38:0,110,255	0/1:13,24:37:255,0,105
-chr21	33333615	chr21:33333615:M	TTTTTTTTTTTCTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:8:0,23,134	0/1:3,2:6:15,0,42	0/1:5,4:9:39,0,55
-chr21	33335916	chr21:33335916:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:24:142,0,107	0/1:11,7:18:60,0,124	0/1:12,13:25:142,0,125
-chr21	33336748	chr21:33336748:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:40,1,0	1/1:1,5:6:64,1,0	0/1:3,4:8:53,0,26
-chr21	33337628	chr21:33337628:M	ATATATACACTATATATATACATACTGTATATATA	<16.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:12,13:25:147,0,126	0/1:20,16:36:155,0,214	0/1:19,18:37:192,0,202
-chr21	33338532	chr21:33338532:M	AAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:8:198,24,0	1/1:0,9:11:243,23,0	0/1:12,5:19:81,0,255
-chr21	33339928	chr21:33339928:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,3:5:40,34,56,0,8,5	0/1:2,5,0:7:121,0,36,81,32,94	0/2:2,1,6:9:86,67,116,0,17,8
-chr21	33342689	chr21:33342689:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:24,0,96	0/0:5,0:7:0,20,108	0/0:6,0:8:0,21,118
-chr21	33344162	chr21:33344162:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,26:45:255,0,227	0/1:23,22:47:255,0,255	0/1:21,27:49:255,0,253
-chr21	33344761	chr21:33344761:M	TTTACTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.8>,<13.8>,<14.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/3:0,15,0,10:25:255,255,227,255,183,255,255,0,255,255	1/3:0,1,0,2:3:84,55,51,52,35,44,27,0,17,21	2/3:0,0,7,8:15:255,255,255,145,144,102,127,108,0,84
-chr21	33347132	chr21:33347132:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:22:121,0,123	0/1:6,9:17:127,0,55	0/1:6,8:17:105,0,76
-chr21	33360397	chr21:33360397:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,4:35:0,29,255	0/0:29,0:32:0,93,255	0/1:15,16:32:196,0,186
-chr21	33367887	chr21:33367887:M	TCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTCTTTTCTTTTCTCTTCTTTTCTTTT	<12.6>	.	.	Motif=TCTTT	GT:AD:DP:PL	0/1:5,9:14:132,0,55	0/1:7,5:12:55,0,92	0/1:7,5:12:58,0,96
-chr21	33368257	chr21:33368257:M	TGTGTGTGTGTGTGTGTGTG	<9>	.	.	Motif=TG	GT:AD:DP:PL	0/0:45,1:46:0,117,255	0/0:41,1:43:0,108,255	0/1:15,13:29:167,0,194
-chr21	33371123	chr21:33371123:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,22:36:255,0,157	1/1:1,29:31:255,73,0	0/1:16,16:33:196,0,205
-chr21	33372253	chr21:33372253:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:7:33,0,35	0/0:1,0:2:0,5,26	0/1:1,2:3:26,0,8
-chr21	33373135	chr21:33373135:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,4:13:35,0,128	0/1:10,4:14:29,0,134	0/0:15,0:18:0,52,255
-chr21	33373435	chr21:33373435:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:28:0,81,255	0/1:7,4:14:87,0,155	0/0:14,0:17:0,45,255
-chr21	33379468	chr21:33379468:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,1:22:0,45,255	0/1:6,7:15:78,0,77	0/0:16,1:19:0,37,255
-chr21	33382245	chr21:33382245:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/1:18,11:30:109,0,234	0/0:27,1:28:0,64,255
-chr21	33384083	chr21:33384083:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,6,57	1/1:0,7:7:196,21,0	.
-chr21	33384265	chr21:33384265:M	GTTTTTTGTTTGTTGGTTGGTTTGTTTGTTTGTTT	<4.8>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:20,7:27:107,0,255	0/0:28,2:32:0,35,255	0/0:18,2:20:0,5,255
-chr21	33385978	chr21:33385978:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,97,255	0/1:17,9:27:81,0,222	0/0:18,0:19:0,55,255
-chr21	33388953	chr21:33388953:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:7:0,15,143	0/1:5,7:13:164,0,100	0/0:7,0:7:0,21,196
-chr21	33392702	chr21:33392702:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<12>	.	.	Motif=GT	GT:AD:DP:PL	0/0:16,0:18:0,50,255	0/1:8,8:17:98,0,81	0/0:23,0:25:0,73,255
-chr21	33398652	chr21:33398652:M	TGTGATGTGATGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:15,0:18:0,43,255	0/1:4,8:14:212,0,99	0/0:13,1:14:0,9,255
-chr21	33401595	chr21:33401595:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAATAAATAA	<14.8>,<15.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:3,5,0:8:73,0,35,82,57,162	1/1:0,6,0:6:109,18,0,109,18,109	0/2:9,0,5:15:102,92,229,0,173,229
-chr21	33405104	chr21:33405104:M	AAAAAAAAAAAAAAAAAAAAGAAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,2:11:4,31,255,0,160,130	0/1:1,11,1:15:255,0,12,170,19,168	0/2:6,0,3:10:24,44,210,0,113,88
-chr21	33406649	chr21:33406649:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,4:34:0,27,255	0/1:14,7:21:58,0,177	0/0:24,1:27:0,61,255
-chr21	33410167	chr21:33410167:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:17:87,0,115	1/1:2,22:26:255,41,0	0/0:14,0:15:0,41,250
-chr21	33416822	chr21:33416822:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:254,41,0	1/1:1,11:12:173,18,0	0/1:5,12:17:163,0,39
-chr21	33419460	chr21:33419460:M	TGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:25,13:39:134,0,255	0/1:25,24:50:255,0,255	0/0:42,0:42:0,124,255
-chr21	33421332	chr21:33421332:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,5:10:45,0,34	0/1:3,6:10:67,0,14	0/0:7,2:13:0,4,101
-chr21	33423829	chr21:33423829:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,0,14:24:255,253,255,0,182,219	1/2:0,17,7:25:255,129,60,249,0,226	0/1:16,14,1:32:171,0,208,196,255,255
-chr21	33428210	chr21:33428210:M	TTTTTTTTTTTTTTTT	<14>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,0,6:23:107,159,255,0,255,255	0/2:8,0,7:18:151,186,255,0,210,181	0/1:14,16,0:34:255,0,255,255,255,255
-chr21	33433790	chr21:33433790:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:4,24:30:255,16,0	0/1:21,21:44:255,0,255
-chr21	33437983	chr21:33437983:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,6:22:41,0,218	0/0:15,2:18:0,16,219	0/1:13,6:20:45,0,176
-chr21	33438732	chr21:33438732:M	TTTTTTTTTTTCTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,30:34:255,80,0	1/1:1,23:24:255,53,0	0/1:22,16:38:181,0,255
-chr21	33442012	chr21:33442012:M	TTTGTTTGCTTGTTTGTTTG	<4>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,40:40:255,118,0	0/1:20,26:46:255,0,239
-chr21	33442921	chr21:33442921:M	AAAAAAAAAAACAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,109,0	1/1:1,37:40:255,99,0	0/1:27,24:51:255,0,255
-chr21	33443893	chr21:33443893:M	TTTTTTTTTGTTTGTTTGTTTGTTTTTTT	<22>,<30>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,17:35:255,255,255,255,0,255	2/2:0,0,29:29:255,255,255,85,87,0	0/1:18,23,0:41:255,0,255,255,255,255
-chr21	33444804	chr21:33444804:M	AAAAAAAAAAAAAAAAAGAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:2:14,3,0	1/1:0,3:3:84,9,0	0/0:4,0:4:0,12,119
-chr21	33445084	chr21:33445084:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,2:16:0,12,207	0/1:7,3:12:34,0,82	0/0:14,0:14:0,41,237
-chr21	33445787	chr21:33445787:M	AAAAAAAAAAGGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:31:186,0,204	0/0:27,0:29:0,84,255	0/1:16,24:41:255,0,178
-chr21	33446214	chr21:33446214:M	TTTTTCTTTTATTTTTTTTATTTTTTATTTTTTATTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:207,0,255	0/1:6,12:20:255,0,108	0/0:32,0:34:0,101,255
-chr21	33446636	chr21:33446636:M	ACACACACACACACACACACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,3:16:8,0,189	0/1:13,5:18:37,0,180	0/0:17,1:19:0,38,255
-chr21	33447144	chr21:33447144:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,19:23:255,30,0	1/1:2,21:23:255,32,0	0/1:18,12:32:123,0,247
-chr21	33447682	chr21:33447682:M	ACACACACACACACACACACACACACACACACACACACA	<14.5>,<15.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,24,13:39:255,177,68,255,0,187	0/2:12,0,12:27:255,153,255,0,255,255	0/1:12,7,0:24:140,0,255,67,255,255
-chr21	33447720	chr21:33447720:M	ATATATATATATA	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,2:2:49,6,0	1/1:0,3:4:99,12,0	0/0:23,1:25:0,50,255
-chr21	33454103	chr21:33454103:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,3:5:103,52,38,30,0,21	0/1:2,5,1:8:71,0,10,53,17,99	0/1:3,4,0:7:49,0,31,58,51,131
-chr21	33457652	chr21:33457652:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:17:234,31,0	1/1:1,12:15:207,26,0	0/1:9,7:17:84,0,107
-chr21	33459668	chr21:33459668:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:16:177,0,8	1/1:0,9:9:154,26,0	0/1:13,6:22:60,0,176
-chr21	33464199	chr21:33464199:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:27:141,0,186	0/0:26,0:28:0,81,255	1/1:0,13:14:242,41,0
-chr21	33464805	chr21:33464805:M	AAAAAAAAAAAAAAAAAAAACAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:24:255,72,0	1/1:0,29:29:255,87,0	0/1:1,6:9:146,0,7
-chr21	33466781	chr21:33466781:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,50:50:255,148,0	1/1:1,36:37:255,91,0	0/1:16,31:47:255,0,161
-chr21	33472030	chr21:33472030:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:38:0,94,255	0/0:23,0:24:0,69,255	0/1:16,11:30:82,0,177
-chr21	33473458	chr21:33473458:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,1,5:13:64,80,213,0,75,84	0/2:10,2,3:19:35,36,201,0,100,146	0/1:8,4,0:13:46,0,105,81,120,240
-chr21	33473655	chr21:33473655:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:27:0,62,255	0/0:20,2:23:0,33,255	0/1:14,14:33:180,0,167
-chr21	33476761	chr21:33476761:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:53,9,0	1/1:0,4:5:66,11,0	0/1:2,2:5:20,0,30
-chr21	33483226	chr21:33483226:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:36,0,29	0/1:8,3:12:26,0,101	0/1:5,4:9:43,0,61
-chr21	33485003	chr21:33485003:M	TTGTTGTTGTTGTTGTTGTTGTT	<8.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:17,11:28:129,0,247	0/1:11,22:33:255,0,103	0/0:24,0:24:0,71,255
-chr21	33486707	chr21:33486707:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/1:9,7:17:70,0,113	0/0:18,3:24:0,16,255
-chr21	33492341	chr21:33492341:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:12:148,90,114,82,0,99	1/2:0,7,2:11:146,34,25,137,0,191	0/1:5,6,0:12:83,0,55,114,76,238
-chr21	33493267	chr21:33493267:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:2,31:34:255,64,0	0/1:24,18:42:204,0,255
-chr21	33494494	chr21:33494494:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:110,0,13	1/1:0,3:5:87,2,0	1/1:0,2:4:82,12,0
-chr21	33494613	chr21:33494613:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:12:11,0,118	0/1:10,5:19:58,0,127	0/0:20,2:24:0,32,255
-chr21	33496461	chr21:33496461:M	CTCTCTCTCTCTC	<7.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:22,16:39:193,0,255	0/1:17,8:25:72,0,235	0/1:16,13:29:159,0,216
-chr21	33498801	chr21:33498801:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:32:153,0,191	0/1:11,9:25:89,0,153	0/1:9,14:26:174,0,99
-chr21	33499432	chr21:33499432:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,12:31:255,218,131,255,0,237	1/2:0,14,5:21:255,87,26,255,0,207	0/1:8,12,0:23:255,0,182,219,209,255
-chr21	33499903	chr21:33499903:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,2:11:7,0,116	0/1:11,5:19:50,0,144	0/0:20,1:24:0,52,255
-chr21	33503184	chr21:33503184:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATT	<7.2>,<10.2>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:12,0,10:22:130,192,255,0,230,169	1/2:0,16,4:20:255,72,59,255,0,255	0/0:24,0,0:25:0,72,255,74,255,255
-chr21	33503371	chr21:33503371:M	TTTTTTTTTTTTTTTTTTTTT	<15>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,2:18:255,35,2,255,0,255	1/2:0,5,3:9:177,50,58,134,0,126	0/1:4,12,0:16:255,0,67,255,70,255
-chr21	33512290	chr21:33512290:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,7:9:98,0,1	0/1:3,2:5:19,0,36	0/1:4,4:10:63,0,40
-chr21	33513084	chr21:33513084:M	TGTGTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:5,4:12:90,0,113	0/1:6,8:16:174,0,138	0/1:5,7:13:163,0,99
-chr21	33516247	chr21:33516247:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:87,15,0	0/1:2,4:8:52,0,20	1/1:0,4:4:68,12,0
-chr21	33519553	chr21:33519553:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:14:101,0,48	0/0:13,2:16:0,4,177	0/1:3,8:12:103,0,26
-chr21	33519824	chr21:33519824:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23:25:255,72,0	1/1:1,27:32:255,75,0	1/1:1,19:21:255,43,0
-chr21	33523968	chr21:33523968:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,0:2:5,0,5	0/0:3,0:4:0,11,61	0/1:4,3:7:30,0,47
-chr21	33528612	chr21:33528612:M	AAAAAAGAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:28:145,0,183	0/1:17,5:24:27,0,234	0/1:16,14:30:161,0,197
-chr21	33528757	chr21:33528757:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,21:35:255,0,98	0/0:24,2:26:0,42,255	0/1:10,12:28:156,0,127
-chr21	33529451	chr21:33529451:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:22,0,84	0/0:11,2:13:0,4,151	0/0:11,0:12:0,35,202
-chr21	33531570	chr21:33531570:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,6:24:25,0,126	0/1:15,4:28:6,0,139	0/0:19,3:26:0,14,202
-chr21	33533439	chr21:33533439:M	AAAAAAAAAAAAATAAATAAATAAATAAAAATAAAAA	<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2:9:12,0,54	0/1:2,7:10:65,0,1	0/1:6,3:10:14,0,53
-chr21	33538242	chr21:33538242:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:7:32,0,41	0/1:5,2:9:19,0,60	0/1:4,2:6:16,0,50
-chr21	33543531	chr21:33543531:M	CCCCTCCCCCTC	<2.2>	.	.	Motif=CCCCTC	GT:AD:DP:PL	1/1:0,37:37:255,102,0	1/1:0,31:31:255,86,0	1/1:0,36:36:255,100,0
-chr21	33547706	chr21:33547706:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:5:149,15,0	0/1:1,2:4:55,0,23	.
-chr21	33547891	chr21:33547891:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,11,13:26:255,190,180,195,0,143	1/2:0,14,17:34:255,254,204,255,0,185	0/1:16,15,1:32:255,0,255,255,255,255
-chr21	33549082	chr21:33549082:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,16:31:197,0,180	0/0:27,2:30:0,53,255	0/1:14,13:29:154,0,172
-chr21	33555095	chr21:33555095:M	GCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGCCGCAGCCGCACCCCCAGCCGC	<3.8>,<7.3>	.	.	Motif=GCCGCA	GT:AD:DP:PL	1/2:1,6,12:19:255,239,244,120,0,107	1/2:0,7,5:12:255,113,92,149,0,134	1/2:1,11,4:16:255,65,56,226,0,237
-chr21	33556712	chr21:33556712:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,11:21:149,0,85	0/1:7,4:12:43,0,85	0/1:12,8:23:85,0,156
-chr21	33558960	chr21:33558960:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:2:19,3,0	1/1:0,3:3:51,9,0	1/1:0,3:3:52,9,0
-chr21	33564862	chr21:33564862:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:9:79,0,19	0/0:2,0:2:0,6,33	0/0:2,0:3:0,9,46
-chr21	33572169	chr21:33572169:M	TATATTATATATTTATATATATATATATATATATAT	<17>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,19:19:255,56,0	1/1:0,3:3:53,9,0	1/1:0,16:17:255,47,0
-chr21	33577605	chr21:33577605:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<24>,<34>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,4:8:121,121,121,14,14,0	2/2:0,0,3:5:94,94,94,12,12,0	1/1:0,8,0:11:255,30,0,255,30,255
-chr21	33580240	chr21:33580240:M	ATGAATGAATGAATGAATGAATGAATGAATG	<6.8>	.	.	Motif=ATGA	GT:AD:DP:PL	0/1:10,13:23:183,0,126	0/1:12,8:20:86,0,159	0/1:8,12:20:167,0,92
-chr21	33583201	chr21:33583201:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:171,21,0	1/1:0,3:4:88,10,0	0/0:1,0:1:0,3,27
-chr21	33584015	chr21:33584015:M	TATATATATATATATATATATATATATATATA	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:16:254,5,0	1/1:0,3:5:98,13,0	0/1:2,8:13:204,0,29
-chr21	33585388	chr21:33585388:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:8:31,0,58	0/0:6,1:7:0,3,86	0/1:2,3:7:33,0,33
-chr21	33594639	chr21:33594639:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:7:42,0,32	0/0:4,0:5:0,3,56	0/1:2,2:6:28,0,27
-chr21	33597615	chr21:33597615:M	TTTTTGTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:28:255,0,255	0/1:18,10:28:202,0,255	0/1:21,11:32:225,0,255
-chr21	33599639	chr21:33599639:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,128,0	1/1:0,43:44:255,128,0	1/1:1,38:40:255,100,0
-chr21	33604529	chr21:33604529:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,11:12:181,17,0	1/1:2,9:13:138,3,0	0/1:7,7:16:95,0,78
-chr21	33615155	chr21:33615155:M	TTTTTTTTTTTTTTTTTT	<15>,<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,11,10,1:24:255,182,127,230,0,164,255,135,213,255	1/2:0,15,9,0:25:255,156,82,255,0,198,255,130,255,255	2/3:1,1,10,4:16:255,213,255,42,67,40,175,131,0,148
-chr21	33618289	chr21:33618289:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:5:0,15,86	0/1:3,3:8:32,0,33	0/1:7,2:10:8,0,93
-chr21	33627740	chr21:33627740:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,3:11:49,0,45	0/1:2,3:6:44,0,16	0/1:2,4:7:60,0,15
-chr21	33628604	chr21:33628604:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:28:255,79,0	1/1:0,27:29:255,84,0	1/1:1,23:26:255,59,0
-chr21	33629067	chr21:33629067:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:30:255,70,0	1/1:1,22:26:255,58,0	1/1:0,27:28:255,82,0
-chr21	33634881	chr21:33634881:M	ATATATATATATATATATATATATA	<10.5>,<11.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,15,12:28:255,169,150,254,0,194	1/2:0,3,3:6:122,44,35,52,0,35	1/2:0,22,12:35:255,182,113,255,0,255
-chr21	33635347	chr21:33635347:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:53,9,0	1/1:1,5:8:91,6,0	1/1:1,6:8:98,6,0
-chr21	33637761	chr21:33637761:M	ATATATATATATATATATATATATATATA	<12.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:33,0:38:0,101,255	0/1:5,8:17:217,0,65	0/0:20,1:24:0,41,255
-chr21	33637789	chr21:33637789:M	ACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:41,2:43:0,86,255	0/1:7,12:21:208,0,99	0/1:13,5:23:56,0,238
-chr21	33638211	chr21:33638211:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,1:11:0,15,159	0/1:2,3:7:41,0,24	0/1:4,4:9:43,0,51
-chr21	33639826	chr21:33639826:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,7,1,3:12:218,119,138,175,46,236,126,0,190,213	1/2:0,12,7,1:22:255,130,163,229,0,255,255,104,255,255	0/0:9,0,0,0:9:0,26,163,26,163,163,27,187,187,255
-chr21	33644828	chr21:33644828:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,17:44:191,0,255	0/1:17,8:26:66,0,236	0/1:21,19:42:236,0,255
-chr21	33650031	chr21:33650031:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:31:0,74,255	0/1:9,3:12:9,0,97	0/0:24,0:25:0,71,255
-chr21	33655584	chr21:33655584:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,146	0/0:1,0:3:0,6,41	0/1:2,3:9:81,0,40
-chr21	33659706	chr21:33659706:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,4:6:94,0,13
-chr21	33669443	chr21:33669443:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,12:27:152,0,156	0/1:10,4:15:35,0,130	0/1:18,8:28:70,0,255
-chr21	33677343	chr21:33677343:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,79,255	0/0:29,1:32:0,76,255	0/1:20,7:28:42,0,255
-chr21	33681616	chr21:33681616:M	TTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTGTTTTGTTTTTGTTTT	<53>,<68>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,0,5:12:110,131,255,0,183,168	0/2:1,0,2:3:49,52,78,0,26,20	0/1:8,5,0:13:103,0,194,127,209,255
-chr21	33687231	chr21:33687231:M	AAAAGAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,15:32:185,0,223	0/1:12,17:29:215,0,127	0/0:28,1:29:0,67,255
-chr21	33687399	chr21:33687399:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,3,29	0/0:0,0:1:0,0,0	0/1:1,3:5:79,0,14
-chr21	33689968	chr21:33689968:M	AAAAAAAAAAAAAAATAATTAAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,1:17:0,32,255	0/0:10,0:11:0,32,179	0/1:14,14:29:159,0,168
-chr21	33690600	chr21:33690600:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,13:26:170,0,170	0/1:19,8:27:63,0,255	0/0:26,0:26:0,77,255
-chr21	33697235	chr21:33697235:M	TTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:13:255,36,0	1/1:0,4:4:111,12,0	0/1:3,1:6:16,0,69
-chr21	33700952	chr21:33700952:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,12:24:255,255,255,201,0,255	1/2:0,9,7:19:255,179,169,153,0,224	1/2:0,11,7:18:255,180,152,187,0,255
-chr21	33703084	chr21:33703084:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,19,9:28:255,162,82,255,0,255	1/2:0,11,11:22:255,189,126,160,0,127	0/1:10,11,0:21:135,0,117,165,176,255
-chr21	33705111	chr21:33705111:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:14:55,0,99	0/0:7,1:9:0,9,110	0/0:3,0:3:0,9,51
-chr21	33711646	chr21:33711646:M	TGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTGT	<23.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,18:29:255,255,239,175,0,97	0/1:6,9,0:16:223,0,122,160,100,220	0/2:9,1,10:20:128,130,255,0,138,99
-chr21	33713829	chr21:33713829:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,3:5:45,0,3
-chr21	33714623	chr21:33714623:M	TATATCTATATCTATATCTATA	<2.7>	.	.	Motif=TATATC	GT:AD:DP:PL	1/1:0,47:47:255,137,0	1/1:0,35:35:255,102,0	1/1:0,44:44:255,128,0
-chr21	33717730	chr21:33717730:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:16,6:23:51,0,243	0/1:16,20:37:255,0,183	0/1:24,18:42:213,0,255
-chr21	33724084	chr21:33724084:M	TGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGT	<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,12,17:30:255,255,239,177,0,153	1/2:1,17,14:32:255,232,159,240,0,224	0/1:23,16,0:40:182,0,255,254,255,255
-chr21	33725121	chr21:33725121:M	TTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTT	<30>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6,0:10:149,24,0,169,29,218	1/1:0,11,0:17:255,46,0,255,50,255	1/2:3,4,5:16:84,15,117,72,0,118
-chr21	33741895	chr21:33741895:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4:7:86,0,60	0/1:7,3:10:45,0,158	0/0:5,0:7:0,17,145
-chr21	33748990	chr21:33748990:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:25:255,72,0	1/1:3,33:39:255,61,0	0/1:8,12:22:163,0,82
-chr21	33752825	chr21:33752825:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,13:31:140,0,230	0/1:12,12:27:134,0,145	0/0:38,1:40:0,99,255
-chr21	33763230	chr21:33763230:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:5:6,0,24	0/1:1,5:8:41,0,13	0/0:3,1:5:0,0,31
-chr21	33769700	chr21:33769700:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,16:34:198,0,225	0/1:17,21:38:255,0,187	0/0:33,1:35:0,84,255
-chr21	33770765	chr21:33770765:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,6:14:68,107,255,0,122,104	0/1:6,3,2:12:28,0,89,25,53,127	0/0:24,1,2:27:0,61,255,44,255,255
-chr21	33776387	chr21:33776387:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,13:32:147,0,213	0/1:10,5:18:38,0,133	0/1:16,6:24:45,0,219
-chr21	33776545	chr21:33776545:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:18:109,0,84	0/1:6,6:14:74,0,63	0/0:15,0:15:0,44,255
-chr21	33783692	chr21:33783692:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:30:122,0,223	0/1:8,13:23:178,0,71	0/1:21,10:32:94,0,255
-chr21	33784311	chr21:33784311:M	ACACACACACACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/1:11,17:29:255,0,218	0/1:7,13:21:255,0,129	0/1:6,15:23:255,0,106
-chr21	33795951	chr21:33795951:M	TTTTTTTTTTTTTTTTAATTTTTTATTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,10:10:255,209,182,30,29,0	1/2:2,7,15:24:255,221,189,67,0,73	1/2:0,8,5:13:247,88,51,119,0,104
-chr21	33798265	chr21:33798265:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,16:36:201,0,239	0/1:14,9:24:88,0,186	0/0:30,0:31:0,91,255
-chr21	33806048	chr21:33806048:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:112,12,0	0/1:12,5:19:87,0,255	0/1:10,5:17:93,0,237
-chr21	33813755	chr21:33813755:M	TTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/1:20,21:43:254,0,236	0/0:47,0:48:0,141,255
-chr21	33813824	chr21:33813824:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,8:25:74,0,239	0/1:13,12:25:136,0,153	0/0:38,1:41:0,99,255
-chr21	33840358	chr21:33840358:M	TTTTTTGTTTTTTAATTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,95,255	0/1:18,17:35:203,0,218	0/0:35,0:35:0,103,255
-chr21	33841938	chr21:33841938:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,3:4:42,53,90,0,15,6	1/2:1,6,3:13:125,51,73,87,0,137	0/0:14,1,1:16:0,29,240,29,219,240
-chr21	33842496	chr21:33842496:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	0/2:8,0,14:24:255,255,255,0,210,160	1/2:0,11,13:27:255,255,255,255,0,255	0/0:21,0,0:23:0,69,255,63,255,255
-chr21	33862165	chr21:33862165:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:29,3,0	1/1:0,0:2:28,6,0	1/1:0,4:7:131,16,0
-chr21	33867639	chr21:33867639:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:21:255,58,0	1/1:0,12:15:255,41,0	1/1:0,21:24:255,68,0
-chr21	33871430	chr21:33871430:M	AAAAAAACAAAAAAAAAAACAAAAAACAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:21:255,63,0	1/1:0,34:34:255,102,0	1/1:0,32:33:255,99,0
-chr21	33871740	chr21:33871740:M	AAAAAAAAAAAAAGAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,54:55:255,164,0	1/1:0,33:34:255,99,0	1/1:0,36:38:255,113,0
-chr21	33874157	chr21:33874157:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:51,9,0	1/1:0,3:3:49,9,0	0/1:2,3:6:35,0,19
-chr21	33874640	chr21:33874640:M	TTTTCTTTTTCTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:6:175,18,0	1/1:0,8:10:239,24,0	1/1:0,8:9:232,24,0
-chr21	33876234	chr21:33876234:M	TCTCTCTCTCTTTCTTCTCCTTCCTTCCTCTCTTCTTTTTCTCTCTTTCTTTCCTTCTCTCTCTCT	<5.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,16:16:255,48,0	1/1:0,18:18:255,54,0	1/1:0,27:27:255,81,0
-chr21	33876883	chr21:33876883:M	AGATATAGATATAGATGTAGATATAGATATAGATATAGA	<7.5>	.	.	Motif=AGATAT	GT:AD:DP:PL	1/1:0,16:16:255,47,0	1/1:0,20:20:255,59,0	1/1:0,24:24:255,71,0
-chr21	33877826	chr21:33877826:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,40:41:255,123,0	1/1:0,39:39:255,117,0	1/1:0,37:39:255,116,0
-chr21	33878009	chr21:33878009:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,9:23:255,102,34,153,0,86	1/2:0,11,28:39:255,255,187,128,0,11	1/2:0,16,12:30:255,135,46,195,0,108
-chr21	33881946	chr21:33881946:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,9:9:158,26,0	0/1:4,5:10:64,0,39	0/1:2,6:8:80,0,11
-chr21	33887320	chr21:33887320:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,39:43:255,117,0	0/1:15,22:38:255,0,171
-chr21	33887587	chr21:33887587:M	TTTTTTCTTTTTATTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:37:255,80,0	1/1:0,28:32:255,80,0	0/1:19,16:35:143,0,188
-chr21	33887944	chr21:33887944:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:26:255,58,0	1/1:0,43:43:255,126,0	0/1:24,21:46:243,0,255
-chr21	33895494	chr21:33895494:M	TGTGTGTGCGTGCGCGTGTTTGTGTGTGCATGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,14:14:242,41,0	0/1:12,7:19:70,0,155
-chr21	33908170	chr21:33908170:M	AAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:117,0,13	1/1:0,4:6:144,18,0	0/0:3,0:4:0,12,101
-chr21	33911663	chr21:33911663:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:2:0,1,2	0/1:7,3:10:20,0,86	0/0:1,0:3:0,6,27
-chr21	33914164	chr21:33914164:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,20:43:248,0,255	1/1:4,42:47:255,67,0	0/0:44,0:45:0,132,255
-chr21	33918442	chr21:33918442:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,22:38:255,0,142	1/1:0,32:33:255,97,0	0/0:25,2:27:0,43,255
-chr21	33921263	chr21:33921263:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:7,0,35	0/1:2,4:8:58,0,24	0/0:9,0:9:0,26,159
-chr21	33921419	chr21:33921419:M	AAAAAAAAAAAAAAAAAAACAAAAAAAGAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:10:50,0,57	1/1:0,11:13:201,37,0	0/0:6,0:6:0,18,102
-chr21	33925237	chr21:33925237:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:29:178,0,198	0/0:27,0:27:0,79,255	1/1:0,24:25:255,73,0
-chr21	33938189	chr21:33938189:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:8:166,45,30,87,0,65	2/2:1,1,6:8:95,74,95,6,6,0	1/2:1,6,5:12:196,56,63,85,0,69
-chr21	33940587	chr21:33940587:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,23:43:255,0,211	0/0:46,5:51:0,62,255	1/1:0,39:40:255,117,0
-chr21	33944306	chr21:33944306:M	AAAAAAAAAAAACAAAAAGAAAAAGAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,8:18:95,0,132	0/1:9,8:19:87,0,115	1/1:0,30:30:255,88,0
-chr21	33945707	chr21:33945707:M	AAAAAAATAGAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:15:71,0,90	1/1:0,11:12:197,35,0	0/0:16,2:19:0,21,253
-chr21	33946576	chr21:33946576:M	TCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,18:34:134,0,108	0/1:14,15:29:106,0,93	1/1:2,32:34:255,69,0
-chr21	33952629	chr21:33952629:M	AAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,2:2:55,40,35,6,6,0	0/2:1,1,4:6:108,50,62,0,9,11	1/2:0,4,10:15:255,179,140,70,0,26
-chr21	33956189	chr21:33956189:M	AAAAAAAAAAAAAAA	<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,4,3:9:162,52,65,85,0,104	1/2:0,1,4:8:153,125,121,28,0,8	2/2:0,0,7:7:208,208,208,21,21,0
-chr21	33956225	chr21:33956225:M	ACACACACACACACACACACACACACACACACACACACACGCACA	<20.5>,<21.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,12,5:18:255,255,255,141,141,106,209,209,0,255	0/3:8,0,1,5:14:111,135,255,120,252,228,0,202,116,202	1/2:0,12,6,0:18:255,88,52,206,0,156,255,104,207,255
-chr21	33960271	chr21:33960271:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,10:28:104,0,244	0/1:23,7:30:35,0,255	1/1:2,26:31:255,54,0
-chr21	33961657	chr21:33961657:M	AAAAAAAAAAAAAAAAGAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:12:36,0,107	0/1:2,3:6:35,0,19	1/1:1,6:8:94,6,0
-chr21	33965116	chr21:33965116:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:37,2:41:0,74,255	0/1:19,12:31:121,0,244	0/0:45,0:49:0,143,255
-chr21	33965458	chr21:33965458:M	AATATAATAAATATAATAAATATA	<5.6>	.	.	Motif=AATAT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	1/1:0,8:8:255,24,0	1/1:0,32:32:255,96,0
-chr21	33971511	chr21:33971511:M	ACACACACACACACACACACACACACAC	<11>,<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:16,24,0:40:255,0,255,255,255,255	1/2:0,14,12:28:255,219,255,255,0,255	0/0:34,0,1:36:0,98,255,85,255,255
-chr21	33972215	chr21:33972215:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:22,18,30,0,18,23	1/1:0,3,0:3:51,9,0,51,9,51	1/2:0,2,7:9:201,120,96,30,0,9
-chr21	33974050	chr21:33974050:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACATATATACACACACACA	<33.5>,<39.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,2,3:5:108,80,74,34,0,43	1/1:0,3,0:3:49,9,0,58,9,90	2/2:0,0,0:2:3,3,3,1,1,0
-chr21	33976338	chr21:33976338:M	CACTCACTCACTCACTCACTCA	<3.5>,<4.5>	.	.	Motif=CACT	GT:AD:DP:PL	1/2:0,19,26:45:255,255,255,255,0,239	1/2:0,12,20:32:255,255,255,217,0,126	2/2:0,0,31:31:255,255,255,92,92,0
-chr21	33982429	chr21:33982429:M	ATTTTTATTTTCTATTTTTTTTTTTTTTTA	<4.8>	.	.	Motif=ATTTTT	GT:AD:DP:PL	0/1:10,10:20:141,0,141	0/1:10,10:22:149,0,137	0/0:19,1:21:0,41,255
-chr21	33989253	chr21:33989253:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:23,0,22	1/1:0,2:3:69,9,0	0/1:1,4:5:95,0,12
-chr21	34002127	chr21:34002127:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:11:35,0,70	0/0:13,2:20:0,17,208	0/0:11,2:16:0,10,178
-chr21	34007811	chr21:34007811:M	TGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,9:18:119,0,98	0/1:18,10:28:97,0,240	0/1:19,16:38:197,0,253
-chr21	34010553	chr21:34010553:M	AAAAAAAAATAAAAAAATAAAAATATAAAATAAAAAATAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12:30:142,0,255	0/1:6,13:19:178,0,52	0/1:9,12:21:162,0,107
-chr21	34012002	chr21:34012002:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,1,30:32:255,255,255,67,65,0	0/2:8,1,8:17:150,92,152,0,93,152	1/2:3,9,6:20:156,21,28,39,0,109
-chr21	34017396	chr21:34017396:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,20:40:255,0,255	0/1:17,23:43:255,0,202	0/0:33,2:35:0,66,255
-chr21	34026119	chr21:34026119:M	ATCTATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCT	<19.5>	.	.	Motif=ATCT	GT:AD:DP:PL	0/0:6,0:6:0,18,113	0/0:8,0:8:0,24,143	0/1:9,4:13:35,0,127
-chr21	34029557	chr21:34029557:M	AAAAAAAAAAAATAAAATAAAAATAAAAATAAAAATAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:164,0,178	0/1:5,9:18:211,0,98	0/0:24,0:25:0,75,255
-chr21	34030496	chr21:34030496:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:41:226,0,255	1/1:4,28:33:255,26,0	0/0:46,3:49:0,90,255
-chr21	34044971	chr21:34044971:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6:17:68,0,134	0/0:10,0:12:0,35,194	1/1:0,12:12:215,35,0
-chr21	34045613	chr21:34045613:M	ATAATAATAATAATA	<6>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:20,19:39:252,0,255	0/0:41,0:41:0,121,255	1/1:1,43:44:255,111,0
-chr21	34047500	chr21:34047500:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:26,2:31:0,51,255	0/1:14,5:20:38,0,185	0/0:23,2:27:0,42,255
-chr21	34049832	chr21:34049832:M	ACACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,7,1:9:216,24,0,140,9,117	1/2:0,3,8:12:197,110,98,60,0,27	.
-chr21	34051025	chr21:34051025:M	ACACACACACACACACACACATACACACACACACACACAGACATACACACACACACA	<24.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,1,17:18:255,255,255,54,35,0	0/2:9,0,11:21:254,184,255,0,240,208	1/2:0,18,10:29:255,173,90,255,0,243
-chr21	34051448	chr21:34051448:M	TAAAAATAAAAA	<1.2>	.	.	Motif=TAAAAA	GT:AD:DP:PL	1/1:0,40:40:255,120,0	0/1:22,23:45:255,0,255	1/1:0,45:45:255,135,0
-chr21	34053014	chr21:34053014:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,7:19:71,0,161	1/1:0,19:20:255,58,0	0/0:16,3:19:0,3,230
-chr21	34053864	chr21:34053864:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:3:77,9,0	0/1:1,3:5:65,0,15	1/1:0,2:2:49,6,0
-chr21	34055336	chr21:34055336:M	CCTGGGCCTGGG	<2.2>	.	.	Motif=CCTGGG	GT:AD:DP:PL	1/1:0,24:24:255,66,0	1/1:0,33:33:255,91,0	1/1:0,32:32:255,89,0
-chr21	34055867	chr21:34055867:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,28	1/1:0,3:4:72,1,0	0/1:1,1:4:19,0,32
-chr21	34056514	chr21:34056514:M	TTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,3:18:42,0,255	0/1:4,5:10:121,0,80	0/1:13,4:19:55,0,255
-chr21	34061096	chr21:34061096:M	AAAAAAAAAAAAAAAGAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,8,3:18:209,87,68,148,0,222	1/2:0,7,8:18:255,198,200,114,0,167	1/2:1,5,1:13:80,18,39,64,0,138
-chr21	34061108	chr21:34061108:M	AAAGAAAAGAAAGAAA	<3.8>	.	.	Motif=AAAG	GT:AD:DP:PL	1/1:0,16:16:255,47,0	1/1:0,19:19:255,55,0	1/1:0,12:12:197,35,0
-chr21	34070391	chr21:34070391:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,15:43:152,0,255	0/1:21,34:55:255,0,206	0/1:14,17:31:217,0,161
-chr21	34084280	chr21:34084280:M	GTGCTTGTGCTT	<2.2>	.	.	Motif=GTGCTT	GT:AD:DP:PL	0/1:26,19:45:255,0,255	0/1:28,19:47:255,0,255	0/0:43,0:43:0,129,255
-chr21	34086512	chr21:34086512:M	TGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,10:29:109,0,249	1/1:0,33:35:255,100,0	0/1:18,18:37:226,0,217
-chr21	34092126	chr21:34092126:M	ATATATATATATATA	<8.5>,<9.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,18:33:255,255,249,245,0,191	1/1:0,40,0:40:255,118,0,255,118,255	1/2:0,19,17:36:255,255,212,255,0,250
-chr21	34093239	chr21:34093239:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,6:20:48,0,191	0/0:17,0:17:0,50,255	0/1:16,9:27:81,0,213
-chr21	34103316	chr21:34103316:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,17:34:212,0,183	0/1:20,14:36:137,0,255	0/1:8,27:37:255,0,37
-chr21	34116179	chr21:34116179:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGT	<21.5>,<22.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,6,0,4:13:255,111,100,228,120,219,168,0,117,166	0/3:3,0,0,7:12:207,217,255,217,255,255,0,80,50,56	1/2:0,10,8,0:19:255,115,82,182,0,130,255,137,183,255
-chr21	34136137	chr21:34136137:M	TTTTTCTTTTCTTTTTTCTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,1:21:0,43,255	0/0:34,0:34:0,100,255	0/1:10,15:25:200,0,109
-chr21	34152398	chr21:34152398:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,1:7:53,8,6,49,0,118	1/2:2,2,3:8:55,38,56,9,0,66	0/1:4,2,0:7:6,0,41,23,50,127
-chr21	34156610	chr21:34156610:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:20:255,39,0	0/1:9,9:19:102,0,111	1/1:0,34:36:255,105,0
-chr21	34156782	chr21:34156782:M	AAAAAAAATAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,8:20:158,0,255	0/1:14,14:28:255,0,255	0/1:32,17:50:255,0,255
-chr21	34156832	chr21:34156832:M	TTTTCTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,15:29:193,0,165	0/1:22,24:46:255,0,252	0/1:28,19:48:214,0,255
-chr21	34157173	chr21:34157173:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17>,<18>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,12,0:22:255,0,206,218,244,255	0/1:11,17,0:28:255,0,231,255,255,255	0/2:9,1,15:27:255,250,255,0,235,210
-chr21	34164894	chr21:34164894:M	TTTTTTTTTTTTCTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,12:23:159,0,129	0/1:16,11:29:111,0,219	0/1:14,11:26:135,0,181
-chr21	34169333	chr21:34169333:M	TTATTTATTTATTTATTTATTTATTTAT	<6>	.	.	Motif=TTAT	GT:AD:DP:PL	1/1:0,30:30:255,89,0	1/1:0,35:35:255,103,0	1/1:0,35:35:255,103,0
-chr21	34169520	chr21:34169520:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:20:255,59,0	1/1:0,16:22:255,59,0	1/1:0,14:17:255,50,0
-chr21	34173737	chr21:34173737:M	AACAACAACAACAACAACAACAACAACAACAACAACAACA	<12.3>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,28:30:255,88,0	1/1:0,16:16:255,47,0	1/1:0,32:32:255,94,0
-chr21	34190143	chr21:34190143:M	CACACACACACACACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/1:16,21:38:255,0,255	0/1:30,11:41:255,0,255	1/1:0,39:41:255,123,0
-chr21	34193227	chr21:34193227:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<12.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:10,20:30:255,0,188	0/0:3,0:3:0,9,83	0/1:7,6:13:125,0,155
-chr21	34196837	chr21:34196837:M	ATATATATATATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,19:35:255,0,204	0/1:16,10:26:104,0,213	0/0:40,0:40:0,118,255
-chr21	34202389	chr21:34202389:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>,<25.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,6,5,3:17:255,74,42,85,16,53,229,0,11,223	1/2:0,8,6,0:15:255,69,28,91,0,49,255,69,91,255	0/3:6,0,0,10:22:247,255,255,255,255,255,0,183,160,148
-chr21	34202433	chr21:34202433:M	GAGAGAGAGAGAGAGAGAAAGAG	<13.5>,<67.5>	.	.	Motif=GA	GT:AD:DP:PL	1/2:0,1,5:7:83,49,43,37,0,27	0/2:11,0,7:18:35,68,255,0,236,255	0/1:8,5,0:14:74,0,143,110,176,255
-chr21	34203756	chr21:34203756:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,15:36:176,0,255	0/1:13,15:28:181,0,146	0/0:29,0:29:0,85,255
-chr21	34207705	chr21:34207705:M	ACACACACACACACACACACACACACACACACACACACACACAC	<18>,<21>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,7:29:255,129,127,255,0,255	1/2:0,11,5:19:255,91,102,255,0,255	1/1:0,19,0:23:255,66,0,255,66,255
-chr21	34210825	chr21:34210825:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:1,38:40:255,97,0	1/1:2,45:48:255,101,0
-chr21	34213151	chr21:34213151:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,2,5:11:82,41,125,0,27,35	1/2:2,3,4:10:80,11,67,5,0,25	1/2:0,4,8:12:224,119,107,70,0,36
-chr21	34221642	chr21:34221642:M	ACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/0:41,0:43:0,128,255	0/1:17,14:32:255,0,255	0/0:41,0:44:0,131,255
-chr21	34224729	chr21:34224729:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:6,0,42	1/1:0,4:4:68,12,0	0/1:3,5:9:61,0,38
-chr21	34224877	chr21:34224877:M	TTTATTTATTTATTTATTTATTTATTTA	<8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:12,14:26:178,0,142	0/0:39,0:39:0,115,255
-chr21	34228482	chr21:34228482:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTA	<13.5>,<14.5>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:1,10,12:23:255,207,163,145,0,135	1/1:1,22,0:23:255,50,0,255,67,255	0/2:15,1,12:28:255,204,255,0,255,255
-chr21	34236881	chr21:34236881:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/1:19,18:39:210,0,230	0/0:39,1:42:0,105,255
-chr21	34239301	chr21:34239301:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:10:23,0,93	1/1:1,9:10:132,12,0	0/1:4,4:8:44,0,45
-chr21	34249910	chr21:34249910:M	AAAAAAAAAGAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:24,13:37:124,0,255	0/0:43,0:44:0,129,255
-chr21	34256624	chr21:34256624:M	CACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,10:24:198,0,247	0/0:37,0:42:0,122,255	0/1:14,13:32:255,0,255
-chr21	34260532	chr21:34260532:M	TATATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:20,11:32:109,0,255	0/0:3,0:5:0,8,51	0/1:10,9:19:106,0,124
-chr21	34271310	chr21:34271310:M	CACACACACACACACACACACACACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/0:32,0:34:0,101,255	0/1:17,10:27:199,0,255	0/0:34,0:36:0,107,255
-chr21	34282247	chr21:34282247:M	AAAAAAAAAAAAAAAGCAAAAAAACAGAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,44,255	0/1:9,8:18:88,0,107	0/0:10,1:15:0,22,191
-chr21	34301962	chr21:34301962:M	AAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,23:26:255,77,0	0/1:7,2:11:24,0,178	1/1:0,17:21:255,61,0
-chr21	34302299	chr21:34302299:M	TTTTTTTTTCTTTTTTTTTTTTTTCTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,17:19:255,37,0	0/1:8,12:21:146,0,86	1/1:1,23:25:255,55,0
-chr21	34317719	chr21:34317719:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,44:45:255,114,0	0/1:20,18:39:204,0,249	1/1:1,41:42:255,105,0
-chr21	34321893	chr21:34321893:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,3:17:4,0,204	0/1:9,6:15:60,0,110	0/1:9,7:16:77,0,112
-chr21	34324973	chr21:34324973:M	TATATATATATACACATATATAT	<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,19:27:255,49,0	0/1:12,5:18:52,0,164	1/1:0,13:15:255,44,0
-chr21	34324995	chr21:34324995:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,3,20:30:255,255,225,78,38,0	1/2:1,8,8:22:255,70,37,66,0,63	2/2:0,5,14:22:255,185,122,64,6,0
-chr21	34333503	chr21:34333503:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:19:255,37,0	1/1:1,14:16:223,30,0	1/1:0,19:22:255,61,0
-chr21	34341186	chr21:34341186:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:12:151,14,0	0/1:5,8:15:111,0,42	0/1:4,12:16:162,0,23
-chr21	34341979	chr21:34341979:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:23:255,67,0	0/1:10,15:26:189,0,100	1/1:2,21:28:255,45,0
-chr21	34349071	chr21:34349071:M	TAAATAAATAAATAAATAAATAAATAAATAAATAA	<7.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:20,14:34:171,0,255	1/1:0,15:15:255,44,0	0/1:19,18:37:230,0,249
-chr21	34355694	chr21:34355694:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:1,30:31:255,73,0	1/1:0,24:25:255,73,0
-chr21	34357176	chr21:34357176:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:58,11,0	0/1:2,0:6:14,0,20	0/1:1,6:9:78,0,5
-chr21	34363026	chr21:34363026:M	AAAACAACAACAACAAACAAAAAC	<4.5>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/0:35,0:35:0,105,255	0/1:12,9:21:166,0,241	0/0:38,0:38:0,114,255
-chr21	34364773	chr21:34364773:M	AAAAAAAAAAAAAAGAAAGAAAAGAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:31:255,72,0	0/1:10,12:23:143,0,116	1/1:0,19:19:255,56,0
-chr21	34368198	chr21:34368198:M	CACACACACACACACACACACACACACACACA	<17>	.	.	Motif=CA	GT:AD:DP:PL	0/0:13,1:14:0,27,137	0/0:13,0:13:0,35,145	0/1:7,3:10:7,0,52
-chr21	34368230	chr21:34368230:M	ATATATATATATATATATATATATATATATATGTATGTTATATATATGTATGTTATATATAT	<28>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,5:9:110,0,49	1/1:0,0:1:14,3,0	0/1:3,5:8:101,0,53
-chr21	34374051	chr21:34374051:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:12:80,0,53	0/1:10,3:14:10,0,137	0/1:5,8:13:99,0,47
-chr21	34393139	chr21:34393139:M	ACACACACACACACACACACACCGCACACACACACA	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,251	0/1:12,5:18:36,0,171	0/0:13,1:15:0,25,231
-chr21	34403368	chr21:34403368:M	AAAAAAAGAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:21:110,0,168	0/1:7,6:13:70,0,88	0/1:10,10:20:127,0,127
-chr21	34403832	chr21:34403832:M	TTTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:11:132,0,107	0/1:5,7:12:154,0,103	0/1:8,15:23:255,0,155
-chr21	34414213	chr21:34414213:M	CACACACACGCGCACACACACACACACACACACACACACACACACACACA	<24>,<26>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,1,4:7:51,52,109,0,13,26	1/2:0,5,1:7:91,16,7,91,0,131	0/0:11,2,1:14:0,6,168,23,148,195
-chr21	34418470	chr21:34418470:M	CAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAC	<6.2>,<9.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/2:0,3,6:9:179,114,150,80,0,62	0/1:3,3,0:6:72,0,71,80,54,126	1/2:0,5,1:6:147,19,12,131,0,128
-chr21	34431453	chr21:34431453:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:28:129,0,240	0/1:11,15:26:196,0,120	0/1:8,8:16:103,0,101
-chr21	34439432	chr21:34439432:M	TGTGTGTGTGTGTGTATATATATGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,7:14:89,0,88	0/1:5,5:11:59,0,58	0/1:6,8:14:105,0,67
-chr21	34444562	chr21:34444562:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:2:0,6,39	0/0:6,0:9:0,26,206	0/1:4,4:9:100,0,91
-chr21	34455183	chr21:34455183:M	AAAAAAAAAAAAAAAGAAACAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:88,0,21	0/1:3,11:17:145,0,5	0/1:2,5:10:59,0,22
-chr21	34469031	chr21:34469031:M	AAACAAACAAACAAACA	<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,9:9:252,27,0	0/1:10,8:18:172,0,228
-chr21	34477050	chr21:34477050:M	ATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,15:16:255,28,0	1/1:0,22:22:255,65,0	0/1:12,10:22:126,0,161
-chr21	34490963	chr21:34490963:M	ACACACACACACACACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:13,0:14:0,41,255	0/0:14,0:14:0,41,252	0/1:12,9:21:106,0,161
-chr21	34491139	chr21:34491139:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:4:0,0,0	1/1:0,7:7:210,21,0	0/0:1,0:4:0,3,29
-chr21	34519363	chr21:34519363:M	TTTTCTTTTCTTTTTTCTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<53>,<54>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,1:2:12,15,41,0,18,12	1/2:0,3,6:9:161,85,76,50,0,25	2/2:0,0,5:6:76,79,88,6,15,0
-chr21	34522189	chr21:34522189:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,3:38:0,55,255	0/0:28,2:33:0,57,255	0/1:17,20:40:255,0,202
-chr21	34523785	chr21:34523785:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:29:255,86,0	1/1:0,37:37:255,109,0	0/1:25,19:44:221,0,255
-chr21	34527855	chr21:34527855:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:29:0,72,255	0/0:25,0:27:0,78,255	0/1:16,13:33:255,0,255
-chr21	34528956	chr21:34528956:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,2:46:0,98,255	0/0:46,2:48:0,106,255	0/1:21,23:45:255,0,255
-chr21	34532964	chr21:34532964:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,13,15:30:255,255,255,217,0,255	2/2:1,0,20:23:255,255,255,46,54,0	1/2:1,11,7:21:255,116,153,187,0,255
-chr21	34546374	chr21:34546374:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/1:30,12:43:81,0,255	0/0:38,3:41:0,67,255
-chr21	34556066	chr21:34556066:M	AAATAAATAAATAAATAAATAAATAAATAAATAATTAAA	<12.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:5,4:9:85,0,112	1/1:0,6:6:166,18,0	0/0:12,0:12:0,36,255
-chr21	34556109	chr21:34556109:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,19:20:255,58,0	1/1:1,7:9:112,9,0	1/1:1,15:17:255,32,0
-chr21	34556430	chr21:34556430:M	AATAATAATAATAATAATAATAATAATAATA	<11.3>,<12.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/2:13,0,12:25:255,227,255,0,244,255	0/0:19,0,0:20:0,58,255,59,255,255	1/2:0,10,8:20:255,159,103,169,0,140
-chr21	34563755	chr21:34563755:M	AAAAAAAAAAAAAAAAA	<13>,<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,6,2,4:16:247,71,107,82,57,76,108,0,39,75	2/3:0,0,3,0:5:69,31,50,1,18,6,25,22,0,16	1/3:0,4,0,3:7:155,49,37,67,27,48,76,0,36,56
-chr21	34563795	chr21:34563795:M	AGAGAGAGAGAGAGAGAGAGAGAGAG	<14>,<15>,<16>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,3,12,7:22:255,234,179,72,42,16,128,66,0,96	1/3:0,2,2,2:6:81,43,28,20,4,9,25,0,4,28	0/1:2,3,2,0:8:33,0,2,4,0,33,32,17,50,98
-chr21	34583179	chr21:34583179:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:62,0,88	0/0:16,2:19:0,21,248	1/1:0,18:19:255,53,0
-chr21	34601818	chr21:34601818:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,1:8:0,6,100	0/1:5,3:8:27,0,61	0/0:14,0:18:0,30,243
-chr21	34605922	chr21:34605922:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,2,0:9:31,0,158,32,153,177	0/0:12,0,0:15:0,44,255,42,255,255	1/2:0,3,7:10:253,119,91,52,0,23
-chr21	34619211	chr21:34619211:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:41:0,120,255	0/0:38,1:41:0,100,255	0/1:18,20:39:255,0,214
-chr21	34625574	chr21:34625574:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:45:0,114,255	0/0:23,2:26:0,42,255	0/1:17,14:34:171,0,204
-chr21	34635885	chr21:34635885:M	TTTTTTTTTTTTTTTTTCTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,3:16:0,1,139	0/0:18,1:21:0,45,255	0/1:10,9:21:84,0,91
-chr21	34644138	chr21:34644138:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,2:2:61,40,34,6,6,0	1/2:0,1,3:5:118,58,46,17,0,2	1/2:0,4,1:5:140,17,2,67,0,53
-chr21	34664881	chr21:34664881:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:32:0,94,255	0/0:14,0:14:0,41,241	0/1:19,16:36:190,0,233
-chr21	34666297	chr21:34666297:M	TTATTTTATTTTTATTTTTTTT	<4.6>	.	.	Motif=TTATT	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/0:44,2:47:0,92,255	0/1:11,23:34:255,0,152
-chr21	34671122	chr21:34671122:M	AAAAAAAAAAAAAAAAAAAAA	<14>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,2:8:56,72,159,0,72,56	2/2:0,0,6:8:161,173,195,21,21,0	0/1:4,10,0:17:255,0,89,255,89,255
-chr21	34675253	chr21:34675253:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1,0:12:0,17,182,35,185,208	0/1:12,4,0:16:22,0,160,68,172,255	0/2:7,1,3:11:21,35,157,0,87,102
-chr21	34678276	chr21:34678276:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:14:0,22,203	0/0:11,2:13:0,4,156	0/1:11,11:25:141,0,132
-chr21	34691553	chr21:34691553:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,232	1/1:1,35:37:255,81,0	0/1:13,22:38:255,0,146
-chr21	34693971	chr21:34693971:M	TTTTCTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,21:27:255,0,56	0/1:1,11:17:255,0,12	0/0:7,0:15:0,27,234
-chr21	34694136	chr21:34694136:M	TTTTTTTTTTTTTTTTT	<16>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:9,1,2:12:21,33,167,0,144,243	2/2:0,0,3:3:84,84,84,9,9,0	0/1:15,6,0:21:45,0,206,106,255,255
-chr21	34699416	chr21:34699416:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,2,9:19:128,90,241,0,68,63	1/2:2,6,12:21:255,134,164,73,0,50	0/2:4,2,3:9:48,10,102,0,34,43
-chr21	34700447	chr21:34700447:M	AAAAAAAAAAAAAAAAGAAAAGAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:6:20,0,97	1/1:0,3:3:84,9,0	0/0:5,0:6:0,18,157
-chr21	34707438	chr21:34707438:M	CACACACACACACACACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:12,11:23:239,0,255	1/1:0,36:36:255,108,0	0/0:29,0:32:0,93,255
-chr21	34711517	chr21:34711517:M	AAATAAACAAACAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<12>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	2/2:0,0,14:14:255,255,255,41,41,0	1/2:0,5,5:10:205,77,62,90,0,62	0/2:9,0,11:20:149,176,255,0,167,112
-chr21	34714685	chr21:34714685:M	AAAAAAACAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,0:10:0,29,167	0/0:13,0:16:0,46,255	0/1:5,6:11:76,0,57
-chr21	34716832	chr21:34716832:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:7,6:17:89,0,111	1/1:0,17:21:255,61,0	0/0:23,0:25:0,63,255
-chr21	34716863	chr21:34716863:M	CACACACACACACACACACACACACACACACACACACA	<20>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,7:20:38,0,86	0/1:11,9:22:51,0,78	0/0:20,0:22:0,60,255
-chr21	34720274	chr21:34720274:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5,0:17:41,0,169,89,184,255	0/2:14,1,7:24:72,118,255,0,185,183	0/1:11,2,0:14:6,0,155,44,164,224
-chr21	34725632	chr21:34725632:M	TTTTTTTTTTGTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,5:18:19,0,131	1/1:1,18:20:231,40,0	0/0:24,0:24:0,68,255
-chr21	34739954	chr21:34739954:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,16:33:223,0,186	1/1:3,38:41:255,67,0	0/0:42,1:44:0,111,255
-chr21	34740525	chr21:34740525:M	ATCCATCCATCCATCCATCCATCCATCCACTCATCAATTTGCCCCATCGTCCATCCATCCATCCATCCATC	<18.8>	.	.	Motif=ATCC	GT:AD:DP:PL	0/1:2,6:8:89,0,14	0/0:3,0:3:0,9,53	0/0:10,0:10:0,29,184
-chr21	34747424	chr21:34747424:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10:22:117,0,153	0/1:13,14:30:178,0,140	0/0:20,1:23:0,49,255
-chr21	34748558	chr21:34748558:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGT	<24>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,8:16:91,0,89	0/1:12,8:20:73,0,138	0/0:19,0:21:0,61,255
-chr21	34753378	chr21:34753378:M	ACACACACACACACACACACAC	<12>,<13>	.	.	Motif=AC	GT:AD:DP:PL	0/2:5,1,8:16:114,68,85,0,41,63	0/1:12,7,1:20:27,0,67,46,108,238	0/0:24,0,0:28:0,70,255,80,255,255
-chr21	34753399	chr21:34753399:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<27.5>	.	.	Motif=CT	GT:AD:DP:PL	0/1:2,0:6:11,0,63	1/1:0,3:3:80,9,0	1/1:0,3:8:99,4,0
-chr21	34757755	chr21:34757755:M	TTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:5:128,127,127,15,15,0	1/2:0,7,2:11:255,65,41,198,0,188	2/2:0,0,5:5:163,163,162,15,15,0
-chr21	34764477	chr21:34764477:M	TCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,29:31:255,93,0	0/1:8,8:17:168,0,187	1/1:0,34:37:255,111,0
-chr21	34764606	chr21:34764606:M	AAATAAAATATAAATAAATAAATAAATAAATAAATACATTAAAAAAATAAA	<11.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,20:20:255,59,0	0/1:6,11:17:148,0,58	1/1:0,29:29:255,86,0
-chr21	34764702	chr21:34764702:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:6:66,0,0	0/0:2,0:3:0,9,47	0/1:2,0:5:14,0,23
-chr21	34767335	chr21:34767335:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:25:255,48,0	0/1:8,11:22:137,0,88	0/1:4,18:22:255,0,6
-chr21	34772764	chr21:34772764:M	CTTTCTTTCTTTC	<6.2>	.	.	Motif=CTTT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	0/1:24,15:39:255,0,255	1/1:0,38:39:255,117,0
-chr21	34773326	chr21:34773326:M	TGTGTGTGTGTGTGTGTGTGT	<14.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,14:31:255,0,255	0/1:25,14:41:255,0,255	0/1:18,17:38:255,0,255
-chr21	34774464	chr21:34774464:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<15.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,7,15:28:255,255,255,166,0,104	0/1:6,6,0:16:127,0,139,135,147,255	1/2:0,9,11:23:255,255,255,206,0,164
-chr21	34776527	chr21:34776527:M	TTTTTTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:97,12,0	0/0:3,0:5:0,11,103	.
-chr21	34793707	chr21:34793707:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:222,0,185	0/1:13,11:26:139,0,153	0/1:25,5:30:3,0,255
-chr21	34804743	chr21:34804743:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:15:38,0,138	0/1:4,9:17:106,0,61	0/1:7,3:13:37,0,98
-chr21	34820645	chr21:34820645:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,15:28:202,0,140	0/0:30,0:31:0,91,255	0/1:13,11:26:123,0,176
-chr21	34823431	chr21:34823431:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,11:17:255,200,154,87,0,38	2/2:0,1,12:13:255,219,183,39,21,0	1/2:0,6,18:25:255,255,235,112,0,41
-chr21	34842493	chr21:34842493:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,17	0/1:2,4:6:47,0,15	1/1:0,1:3:36,8,0
-chr21	34844581	chr21:34844581:M	AATGAATGAGTGAGTGAGTGAATGAATGAATGA	<7.2>	.	.	Motif=AATG	GT:AD:DP:PL	0/1:7,9:20:110,0,74	0/1:16,21:38:242,0,156	0/0:24,0:24:0,70,255
-chr21	34847918	chr21:34847918:M	TTTTTTTTTTCTTCTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,16:35:193,0,252	0/1:17,17:34:199,0,200	0/0:41,0:41:0,121,255
-chr21	34850028	chr21:34850028:M	AACAACAACAACAA	<3.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:22,17:45:255,0,255	0/1:14,17:33:249,0,169	0/0:38,0:38:0,112,255
-chr21	34852170	chr21:34852170:M	AAAACAAAACAAAACAAAACAAAACAAAACAA	<5.4>,<7.4>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:7,16,0:23:243,0,68,255,116,255	1/2:0,18,13:31:255,231,255,255,0,255	0/2:13,0,18:32:248,255,255,0,211,157
-chr21	34853816	chr21:34853816:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,9:20:98,0,119	0/1:12,16:29:181,0,117	1/1:2,18:21:255,27,0
-chr21	34860519	chr21:34860519:M	GTGTGTCTGTGCGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,24:25:255,55,0	0/1:14,9:23:93,0,182	0/1:21,15:37:168,0,255
-chr21	34865275	chr21:34865275:M	TGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:5,0:6:0,18,156	0/0:3,0:5:0,9,88	1/1:0,3:4:84,9,0
-chr21	34871847	chr21:34871847:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:19:255,0,135	0/0:21,0:22:0,63,255	0/1:7,20:27:255,0,112
-chr21	34874124	chr21:34874124:M	TCTCTCTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:14,22:36:255,0,255	0/1:25,24:53:255,0,255	0/0:21,0:21:0,63,255
-chr21	34874678	chr21:34874678:M	AAAAAAAAAACAACAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,16:29:214,0,158	0/1:15,13:28:148,0,183	0/0:32,0:33:0,97,255
-chr21	34876851	chr21:34876851:M	TTTCTTTTTCTTTTTTCTTTTT	<2.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:11,21:32:255,0,214	0/1:21,20:41:255,0,255	0/0:41,0:41:0,123,255
-chr21	34878345	chr21:34878345:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10,0:20:108,0,81,162,114,255	1/2:3,12,5:20:158,36,83,139,0,255	0/0:13,2,0:17:0,4,155,44,164,222
-chr21	34878361	chr21:34878361:M	ATATATATATATATATA	<11.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:30,0:32:0,95,255	0/0:23,0:26:0,76,255	0/1:11,7:22:137,0,232
-chr21	34882691	chr21:34882691:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,31:46:255,0,255	0/1:15,23:42:255,0,255	0/0:32,2:34:0,37,255
-chr21	34894881	chr21:34894881:M	ACACACACACACACACACACACACACACACACACACACACACACACACA	<21.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,3,1:4:103,25,17,78,0,75	0/1:10,8,0:19:191,0,238,221,255,255	0/2:4,0,4:9:88,105,222,0,106,89
-chr21	34909589	chr21:34909589:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,2:13:0,4,148	0/0:7,0:8:0,21,116	0/1:3,3:6:33,0,33
-chr21	34928962	chr21:34928962:M	GGGGGGGGGGG	<13>	.	.	Motif=G	GT:AD:DP:PL	1/1:2,12:21:255,10,0	1/1:1,9:14:225,16,0	0/1:3,14:20:255,0,17
-chr21	34937321	chr21:34937321:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,3,3:9:65,7,35,0,8,67	0/1:5,3,2:10:43,0,56,9,50,127	0/1:4,6,0:11:75,0,40,78,60,177
-chr21	34964488	chr21:34964488:M	AAAAAAAAAAAAAAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:18:255,53,0	0/1:6,7:14:82,0,65	0/1:14,10:24:105,0,178
-chr21	34971505	chr21:34971505:M	CCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACCACCATC	<12>,<14>	.	.	Motif=CCAT	GT:AD:DP:PL	0/0:20,0,0:20:0,59,255,59,255,255	0/1:5,11,0:16:151,0,43,194,77,255	0/2:13,0,9:23:101,165,255,0,216,188
-chr21	34976129	chr21:34976129:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21:38:255,0,155	0/0:32,2:35:0,67,255	0/1:17,20:39:255,0,192
-chr21	34978924	chr21:34978924:M	ACACACACACAGATACACACACACACACACACACACACACACACACACACACACACA	<29.5>,<31.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,6,0:7:101,18,0,106,6,163	2/2:0,0,6:8:204,188,180,24,21,0	0/1:1,4,0:7:51,0,2,65,17,132
-chr21	34982398	chr21:34982398:M	GTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,16:17:255,51,0	1/1:0,25:29:255,83,0	1/1:0,22:22:255,66,0
-chr21	34985868	chr21:34985868:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:14,3,0	0/1:0,0:2:0,0,0	1/1:0,4:5:126,15,0
-chr21	34991545	chr21:34991545:M	GATGATGATGATGATGATGATGATGATGATGGTGATGATGA	<12.7>	.	.	Motif=GAT	GT:AD:DP:PL	1/1:1,27:30:255,66,0	1/1:0,21:21:255,62,0	1/1:0,27:29:255,85,0
-chr21	34992675	chr21:34992675:M	AAAAAAAAAAAAAAGAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,14:20:196,0,50	0/1:12,11:25:128,0,143	1/1:1,22:26:255,58,0
-chr21	34995436	chr21:34995436:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,89	0/0:1,0:3:0,5,27	0/1:1,3:6:48,0,3
-chr21	35001309	chr21:35001309:M	TATATATATATATATATATATATATA	<8>,<12>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,26,17:44:255,255,255,255,0,255	1/2:0,23,9:33:255,157,173,255,0,255	1/1:1,32,0:33:255,69,0,255,87,255
-chr21	35002383	chr21:35002383:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTATTTATTTATTTATTTA	<13.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,8:10:236,24,0	1/1:0,1:2:27,3,0	1/1:0,10:10:255,30,0
-chr21	35022896	chr21:35022896:M	AATAATAATAATAATAATAATAATAA	<12.7>,<13.7>,<14.7>	.	.	Motif=AAT	GT:AD:DP:PL	1/3:0,7,1,4:12:255,114,89,193,59,160,197,0,116,180	2/3:0,0,3,3:6:169,136,126,54,54,37,54,46,0,37	1/2:0,13,5,0:19:255,94,38,251,0,200,255,80,250,255
-chr21	35033123	chr21:35033123:M	TCATTCATTCATTCATTCA	<5.8>	.	.	Motif=TCAT	GT:AD:DP:PL	0/1:24,15:39:174,0,255	1/1:1,26:27:255,61,0	0/1:26,24:50:255,0,255
-chr21	35037925	chr21:35037925:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:1,19:22:255,47,0	1/1:2,25:28:255,46,0
-chr21	35038573	chr21:35038573:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<12>,<13>,<18>	.	.	Motif=CT	GT:AD:DP:PL	2/3:2,2,3,3:11:136,44,81,25,56,61,70,19,0,109	1/2:0,12,2,0:17:255,54,4,127,0,77,255,54,127,255	1/3:0,6,0,8:20:255,220,206,255,220,255,191,0,70,161
-chr21	35038614	chr21:35038614:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<21>,<24>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,3,8,5:20:255,184,155,131,97,106,230,38,0,227	1/2:0,5,12,0:17:255,130,80,58,0,7,255,130,58,255	1/2:1,7,8,2:19:255,67,45,55,0,33,255,40,30,255
-chr21	35038647	chr21:35038647:M	GAGATAGAGAGAGAGAGAGAGAGAGA	<14>	.	.	Motif=GA	GT:AD:DP:PL	0/0:17,4:22:0,8,185	0/0:27,0:27:0,76,255	0/1:14,14:30:112,0,112
-chr21	35040772	chr21:35040772:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:28,6,0	.	1/1:0,3:4:59,11,0
-chr21	35047515	chr21:35047515:M	ACACACACACACACACACACACACACACACACACACACACACACACAC	<18>,<19>,<20>,<21>,<22>	.	.	Motif=AC	GT:AD:DP:PL	3/4:0,2,4,8,8,2:25:255,255,255,203,201,167,99,64,47,48,132,49,8,0,76,255,167,82,39,104,242	1/4:0,6,0,2,2,1:12:255,78,55,122,48,93,144,8,78,117,175,0,68,114,156,210,26,83,122,163,196	2/5:0,1,4,3,0,5:14:255,154,158,101,105,99,115,81,66,91,152,75,45,75,120,150,45,0,25,97,126
-chr21	35047562	chr21:35047562:M	CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<16.5>,<20.5>,<25.5>	.	.	Motif=CT	GT:AD:DP:PL	0/2:6,0,4,0:12:28,57,176,0,78,93,64,201,126,255	2/3:2,0,5,4:12:128,151,244,70,99,81,46,149,0,167	0/1:2,6,0,0:11:84,0,5,115,32,236,116,38,248,255
-chr21	35049396	chr21:35049396:M	TTTTTTTTTTTCTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,97,255	0/1:17,14:33:155,0,227	0/0:38,1:40:0,99,255
-chr21	35049986	chr21:35049986:M	ACACACACACACACACACACACACACACACACACACACACA	<18.5>,<21.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,10,0,6:17:255,159,129,255,106,255,255,0,255,255	1/1:0,24,0,0:24:255,72,0,255,72,255,255,72,255,255	2/3:3,0,5,5:13:140,165,255,34,87,50,21,115,0,86
-chr21	35060265	chr21:35060265:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,22:41:255,0,243	0/1:14,19:34:241,0,162	0/1:20,21:41:255,0,252
-chr21	35064790	chr21:35064790:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,19:43:233,0,255	0/1:16,22:40:255,0,169	0/1:18,23:41:255,0,212
-chr21	35072210	chr21:35072210:M	CTCTCTCTCTCTCTCTCTCTCTC	<10.5>	.	.	Motif=CT	GT:AD:DP:PL	0/0:32,0:32:0,94,255	0/1:11,16:27:203,0,115	0/0:27,1:28:0,64,255
-chr21	35076743	chr21:35076743:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<14.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,15,0:22:255,0,96,255,140,255	0/2:6,0,11:20:255,255,255,0,168,129	0/1:7,16,0:26:255,0,131,255,184,255
-chr21	35079563	chr21:35079563:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:4:0,0,22	0/1:2,4:9:39,0,7	0/1:3,2:6:15,0,17
-chr21	35079739	chr21:35079739:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:83,0,110	0/1:9,8:17:90,0,108	0/1:19,12:34:127,0,255
-chr21	35083042	chr21:35083042:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:5:16,0,38	1/1:0,3:6:52,10,0	0/1:3,3:7:31,0,43
-chr21	35084547	chr21:35084547:M	TATATATATATATATATA	<10>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,11:40:76,0,249	1/1:0,13:16:212,45,0	0/1:16,17:37:157,0,143
-chr21	35086386	chr21:35086386:M	CACACATACACACACACACACACACACACACACACACACA	<18>,<23>	.	.	Motif=CA	GT:AD:DP:PL	0/2:14,0,6:22:106,148,255,0,255,255	1/2:0,9,7:17:255,180,150,241,0,225	0/2:10,0,8:19:188,218,255,0,255,238
-chr21	35093006	chr21:35093006:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCT	<16.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:12,17:31:255,0,255	1/1:0,13:18:255,39,0	0/1:13,19:34:255,0,255
-chr21	35099863	chr21:35099863:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,31:52:255,0,246	0/0:36,1:39:0,93,255	0/1:21,25:46:255,0,253
-chr21	35102904	chr21:35102904:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:1,0,4:6:67,81,129,0,16,1	1/2:0,8,0:13:140,25,3,138,0,216	0/1:4,1,0:5:3,0,56,18,59,86
-chr21	35105835	chr21:35105835:M	TTTTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,8,2:12:255,38,25,222,0,210	1/1:0,6,0:8:205,24,0,182,18,173	0/2:5,0,7:13:96,121,255,0,84,49
-chr21	35106755	chr21:35106755:M	CCAGCCCAGCCCAGCCCAGCCCAGCCCAGCACAGCACAGCACAGCCCTGCCCAG	<11.8>	.	.	Motif=CCAGC	GT:AD:DP:PL	0/1:9,7:16:86,0,124	0/1:12,10:22:115,0,151	0/0:19,0:19:0,56,255
-chr21	35114655	chr21:35114655:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,0:33:0,90,255	0/1:17,10:34:42,0,122	0/0:30,1:31:0,73,255
-chr21	35116447	chr21:35116447:M	GTGTGTGTGTGTGT	<6>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,33:52:255,0,208	0/0:8,0:8:0,24,143	1/1:0,51:51:255,150,0
-chr21	35116460	chr21:35116460:M	TATATATATATAT	<5.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:51,0:51:0,145,255	0/1:8,13:22:117,0,57	0/0:54,2:56:0,131,255
-chr21	35123994	chr21:35123994:M	AAAAAAAAAAAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:34:255,0,157	0/0:31,1:36:0,86,255	1/1:3,31:39:255,34,0
-chr21	35126441	chr21:35126441:M	TATATATATATATA	<6>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,20:45:253,0,255	0/1:17,17:34:209,0,209	1/1:0,39:39:255,115,0
-chr21	35127742	chr21:35127742:M	ATATATATATATATAT	<9>,<10>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,23,0:39:255,0,195,255,255,255	0/0:38,0,0:38:0,112,255,114,255,255	1/2:0,19,11:30:255,208,121,255,0,255
-chr21	35132879	chr21:35132879:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,2:7:37,0,65	0/0:1,0:1:0,3,25	1/1:0,8:12:234,29,0
-chr21	35134159	chr21:35134159:M	GTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<28>	.	.	Motif=GT	GT:AD:DP:PL	0/0:18,0:19:0,57,255	0/1:5,2:8:32,0,124	0/1:2,3:5:65,0,39
-chr21	35137864	chr21:35137864:M	TTTATTTATTTATTTATTTATTTATTTATTT	<5.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/0:41,0:41:0,123,255	0/1:11,12:23:255,0,228	0/0:37,0:37:0,111,255
-chr21	35138383	chr21:35138383:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,6,0:19:255,93,54,235,0,182,255,109,236,255	2/3:0,0,19,10:30:255,255,255,255,255,224,255,255,0,255	1/1:0,39,0,0:41:255,123,0,255,120,255,255,123,255,255
-chr21	35139452	chr21:35139452:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:21:0,54,255	0/1:18,25:48:255,0,255	0/0:38,0:43:0,122,255
-chr21	35140180	chr21:35140180:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:5,0,3:8:28,52,212,0,86,63	0/1:2,10,1:14:247,0,32,239,16,255	0/2:5,0,2:8:11,34,191,0,92,72
-chr21	35141273	chr21:35141273:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,2:21:0,24,255	0/1:9,9:19:110,0,102	0/0:15,1:17:0,32,255
-chr21	35153190	chr21:35153190:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:7:14,0,66	0/0:9,1:12:0,18,151	0/1:13,5:18:33,0,170
-chr21	35154687	chr21:35154687:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:17,7:24:118,0,255	0/1:13,12:28:255,0,255
-chr21	35156060	chr21:35156060:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,70,255	0/1:5,4:9:25,0,38	0/0:15,0:15:0,42,190
-chr21	35158843	chr21:35158843:M	CAAAAAACAAACAAACAAACAAACAAACAAA	<5.8>	.	.	Motif=CAAA	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/1:23,18:42:255,0,255	0/0:27,0:30:0,81,255
-chr21	35166279	chr21:35166279:M	GAAGGAGGGAGGGAGGGAAGGAAGGGGGAAGGGAAGAAAGAAAGAAGGAACGAAGGAAGGAAGGAA	<8.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:11,4:15:54,0,238	0/0:18,0:19:0,44,255	0/1:12,3:19:58,0,255
-chr21	35188926	chr21:35188926:M	AAAAAAAGAAAAAAAAAGAGAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:25,0:25:0,74,255	0/1:15,11:26:130,0,204
-chr21	35188980	chr21:35188980:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,2:43:0,89,255	0/0:30,0:30:0,88,255	0/1:19,13:32:149,0,255
-chr21	35189009	chr21:35189009:M	ACACACACACACACACACACACACACACA	<15.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,16:42:91,0,169	0/1:10,15:30:107,0,73	0/1:13,14:36:80,0,112
-chr21	35199034	chr21:35199034:M	ACACACACACACACACACACACACACACACACACA	<13.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:20,0,0:20:0,60,255,60,255,255	0/2:16,0,13:29:255,255,255,0,255,255	0/1:11,10,0:22:245,0,255,255,255,255
-chr21	35205674	chr21:35205674:M	ACACACACACACACACACACACACACACACACACACACACACACAC	<18.5>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/2:6,0,6:15:128,157,255,0,184,164	0/0:10,0,0:10:0,30,255,30,255,255	1/2:0,8,4:12:255,99,77,217,0,205
-chr21	35211072	chr21:35211072:M	ACAAACAAACAAACAAACAAACAAACAAACAAAAAAC	<10.2>	.	.	Motif=ACAA	GT:AD:DP:PL	0/0:33,0:33:0,98,255	0/0:28,0:29:0,85,255	0/1:22,15:37:173,0,255
-chr21	35216611	chr21:35216611:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:40,0:40:0,118,255	0/0:43,1:45:0,114,255	0/1:22,18:40:210,0,255
-chr21	35224602	chr21:35224602:M	GGGGGGGGGGG	<10>	.	.	Motif=G	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:13,1:14:0,24,203	0/1:11,14:25:171,0,119
-chr21	35230373	chr21:35230373:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,51,255	0/0:15,0:18:0,45,255	0/1:12,8:24:142,0,255
-chr21	35232459	chr21:35232459:M	TGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGT	<19.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:14,9:23:90,0,178	0/1:17,14:31:162,0,217
-chr21	35236635	chr21:35236635:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,6:18:114,0,141	0/1:15,2:21:3,0,255	0/1:4,7:16:167,0,54
-chr21	35240430	chr21:35240430:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,5,7:21:67,27,177,0,27,135	0/2:16,0,10:26:93,165,255,0,227,197	0/1:14,12,0:27:139,0,165,211,204,255
-chr21	35247362	chr21:35247362:M	TAATAATAATAATAATAATAATAATAATAATAATAA	<11>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/0:11,0:11:0,32,197	0/1:13,12:25:149,0,167
-chr21	35254535	chr21:35254535:M	GTGTGTGTGTGTGTGTGCGTGTGTGTGCTTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:27:0,79,255	0/0:22,0:22:0,65,255	0/1:12,13:26:165,0,153
-chr21	35264890	chr21:35264890:M	TTTTTGTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:15:0,41,251	0/0:12,1:13:0,21,187	0/1:9,9:19:101,0,110
-chr21	35265062	chr21:35265062:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:29:0,82,255	0/0:15,0:18:0,45,255	0/1:14,13:28:255,0,255
-chr21	35266369	chr21:35266369:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:17:255,32,0	1/1:1,22:23:255,50,0	0/1:9,8:17:93,0,111
-chr21	35271394	chr21:35271394:M	AAAAAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,34,0:55:255,0,228,255,255,255	0/1:20,22,0:44:255,0,222,255,255,255	0/2:19,0,12:34:255,255,255,0,255,255
-chr21	35279809	chr21:35279809:M	AACAACAACAACAACAACAACAACAACAACAACAA	<12.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:21,0:21:0,62,255	0/1:21,11:32:112,0,255
-chr21	35282442	chr21:35282442:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,30,0:33:255,96,0,255,96,255	1/1:0,25,0:25:255,75,0,255,75,255	1/2:0,14,6:21:255,166,126,255,0,255
-chr21	35287880	chr21:35287880:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:1,24:26:255,59,0	1/1:1,26:29:255,65,0
-chr21	35297316	chr21:35297316:M	CACACACACACACACACACACACACACAC	<10.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,12:12:255,36,0	0/1:1,4:7:97,0,26	1/1:0,16:17:255,51,0
-chr21	35301722	chr21:35301722:M	AAAAAAAAAAAAAAAAAAGAAAA	<22>,<31>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,8,2:16:122,29,22,96,0,229	0/1:8,3,0:15:24,0,66,49,93,255	1/2:0,8,5:13:200,120,97,102,0,175
-chr21	35305131	chr21:35305131:M	TGTGTGTGTGTGTGTGTGTATGTGTGTGTGTG	<14>,<15>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,20,23,0:43:255,255,255,255,0,255,255,255,255,255	1/3:1,17,0,14:32:255,234,255,255,255,255,255,0,255,255	2/2:0,1,32,0:33:255,255,255,97,79,0,255,255,99,255
-chr21	35307408	chr21:35307408:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:191,33,0	1/1:0,4:4:66,12,0	1/1:0,15:15:254,44,0
-chr21	35314220	chr21:35314220:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,7:9:96,0,9	0/1:5,3:8:27,0,61	0/1:5,8:14:106,0,46
-chr21	35348646	chr21:35348646:M	ATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCT	<16>	.	.	Motif=ATTCT	GT:AD:DP:PL	.	1/1:0,4:4:98,12,0	.
-chr21	35360149	chr21:35360149:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCTCTCTTCTCT	<29>,<32>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,11,7:18:255,184,151,255,0,255	2/2:0,0,14:15:255,255,255,45,45,0	1/1:0,23,0:23:255,69,0,255,69,255
-chr21	35362489	chr21:35362489:M	TGTTTTGTTTTTGTTTTTTTTTTTTG	<5.4>	.	.	Motif=TGTTT	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:0,27:27:255,80,0	1/1:4,28:33:255,22,0
-chr21	35371185	chr21:35371185:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,17:34:255,255,231,222,0,194	0/2:27,0,19:47:255,255,255,0,255,255	1/1:2,31,2:35:255,66,0,255,66,255
-chr21	35376223	chr21:35376223:M	TTTTTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,23,0:25:255,74,0,255,74,255	0/1:6,12,0:22:255,0,113,255,110,255	1/2:1,13,8:23:255,120,180,255,0,255
-chr21	35382541	chr21:35382541:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,13:32:144,0,254	0/1:15,8:25:66,0,206	0/0:28,3:31:0,38,255
-chr21	35385951	chr21:35385951:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,18:39:220,0,248	0/1:23,14:38:140,0,255	0/0:37,0:37:0,109,255
-chr21	35393207	chr21:35393207:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,6:21:24,0,110	1/1:1,11:15:110,10,0	0/0:14,0:17:0,40,184
-chr21	35395417	chr21:35395417:M	TATATATACATATATATATGTATATATATATATATATATATGTATATATATATATAT	<31.5>,<67.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,6:10:116,47,38,70,0,65	.	.
-chr21	35395473	chr21:35395473:M	TTTTTTTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,6:10:234,137,120,67,0,43	0/2:0,0,2:3:51,46,55,0,14,8	1/2:0,2,1:3:79,22,15,46,0,39
-chr21	35395628	chr21:35395628:M	TATATATATATAT	<67.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:13,6:19:16,0,255	0/0:10,0:10:0,30,255	0/0:17,0:17:0,51,255
-chr21	35401192	chr21:35401192:M	TTCTTTTTCATTTTCTTTTTTTTTTTTTT	<4.7>,<5>	.	.	Motif=TTCTTT	GT:AD:DP:PL	1/2:0,4,9:13:227,175,201,79,0,71	0/2:13,1,7:23:82,109,255,0,202,213	0/1:18,15,0:34:216,0,255,255,255,255
-chr21	35403024	chr21:35403024:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19.5>,<20.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,2,9,0:11:255,154,123,35,0,2,255,155,35,255	1/1:0,11,0,0:13:255,33,0,212,32,181,255,33,212,255	2/3:0,0,6,6:13:255,255,255,182,181,164,165,101,0,150
-chr21	35409715	chr21:35409715:M	CACACACACACACACACACA	<11>,<12>	.	.	Motif=CA	GT:AD:DP:PL	1/2:1,13,18:32:255,255,252,194,0,166	1/1:0,30,0:30:255,88,0,255,88,255	1/2:1,22,21:44:255,255,255,255,0,255
-chr21	35413203	chr21:35413203:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,2,9,0:12:169,120,140,18,0,1,197,162,34,255	2/3:0,0,6,3:9:129,137,172,51,83,63,102,102,0,152	0/1:8,6,2,0:16:137,0,197,75,110,171,169,146,194,255
-chr21	35414094	chr21:35414094:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,9:13:140,3,0	0/1:3,8:11:100,0,17	0/1:8,8:18:83,0,101
-chr21	35426247	chr21:35426247:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,26:28:255,46,0	1/1:3,28:31:255,38,0	1/1:1,32:34:255,72,0
-chr21	35429428	chr21:35429428:M	TTTTTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,3,5:9:136,58,75,35,0,27	1/2:2,2,4:9:90,24,66,16,0,24	1/1:0,4,1:7:149,18,0,92,3,77
-chr21	35430398	chr21:35430398:M	TTCCTTCCTTTCTCCTTCCTTCCTTCCTTCC	<6.8>	.	.	Motif=TTCC	GT:AD:DP:PL	0/0:45,0:45:0,133,255	0/1:13,5:18:38,0,181	0/0:37,0:37:0,109,255
-chr21	35435661	chr21:35435661:M	TTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,12,0:12:255,228,195,36,35,0,228,195,35,195	0/1:12,5,2,0:20:44,0,142,34,165,255,79,192,255,255	2/3:1,0,3,6:10:226,186,183,71,86,69,23,30,0,23
-chr21	35437242	chr21:35437242:M	TTTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,9,3:12:255,50,16,152,0,120	0/1:7,5,0:14:108,0,164,88,177,249	0/1:4,4,0:10:79,0,98,66,108,163
-chr21	35438215	chr21:35438215:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,115,0	0/1:19,22:42:255,0,225	0/1:23,17:41:193,0,255
-chr21	35440714	chr21:35440714:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,153	0/0:6,0:6:0,18,102	0/1:6,4:10:41,0,76
-chr21	35443412	chr21:35443412:M	AAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:45:255,135,0	0/1:2,16:26:255,0,43	0/1:2,18:26:255,0,19
-chr21	35446085	chr21:35446085:M	ATATATATATATATATATATATATATATAT	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17,0:22:255,58,0,255,60,255	0/1:3,3,0:6:24,0,24,35,10,54	1/2:0,6,11:20:83,35,169,75,0,86
-chr21	35446114	chr21:35446114:M	TTTTTTTTTTTTTTTT	<11>,<15>,<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/3:1,0,13,9,0:24:242,255,255,116,229,175,176,255,0,255,255,255,231,255,255	1/3:0,4,2,3,0:9:118,20,74,103,24,125,89,0,62,99,132,85,136,112,197	2/4:0,0,6,0,4:12:179,183,255,108,96,89,196,250,108,254,88,157,0,155,158
-chr21	35463310	chr21:35463310:M	ACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:21,13:36:211,0,255	0/1:25,18:44:255,0,255	0/1:4,25:33:255,0,10
-chr21	35467967	chr21:35467967:M	CTCCTTCTCCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTC	<12.3>	.	.	Motif=CTC	GT:AD:DP:PL	0/1:7,10:17:137,0,81	0/1:11,13:24:159,0,124	0/0:32,0:32:0,94,255
-chr21	35480819	chr21:35480819:M	ATATATTATATATATATATA	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,15:32:195,0,231	0/1:20,11:32:106,0,255	1/1:2,29:31:255,54,0
-chr21	35505020	chr21:35505020:M	TTTTTTTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,5:22:27,0,217	0/1:10,5:15:42,0,128	0/0:27,1:32:0,74,255
-chr21	35507159	chr21:35507159:M	CACACACACACACACACACACACACACACACACACACACACACACACAC	<18.5>,<19.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,1,23:24:255,255,255,72,53,0	1/2:0,13,5:21:255,95,36,237,0,183	1/2:0,13,13:26:255,226,151,225,0,151
-chr21	35512066	chr21:35512066:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:26:255,76,0	1/1:1,25:26:255,59,0	1/1:0,19:20:255,58,0
-chr21	35512864	chr21:35512864:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:192,21,0	1/1:0,4:6:119,13,0	1/1:0,2:3:60,6,0
-chr21	35517123	chr21:35517123:M	AAAAAAAAAAGAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:21,18:40:205,0,255	0/0:44,0:44:0,130,255
-chr21	35519353	chr21:35519353:M	CACACACACACACACACACACACACACACACACA	<20>,<22>	.	.	Motif=CA	GT:AD:DP:PL	2/2:0,0,15:19:255,255,255,56,48,0	2/2:0,0,20:24:255,255,255,71,63,0	1/2:0,10,12:24:255,255,255,255,0,223
-chr21	35522517	chr21:35522517:M	AAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,19:51:255,0,255	0/1:15,16:34:255,0,255	0/0:39,0:43:0,120,255
-chr21	35526670	chr21:35526670:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,3,6:9:238,102,76,51,0,25	0/1:4,6,0:10:138,0,82,97,102,186	0/2:8,0,7:15:160,116,255,0,206,192
-chr21	35526746	chr21:35526746:M	ATATATATATATAATATATAATATATTATATATAT	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,10:10:119,27,0	.	1/1:0,1:1:12,3,0
-chr21	35526825	chr21:35526825:M	ACACACACACACACACACACACACAC	<19>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,2:17:4,0,255	0/1:5,3:9:52,0,115	0/0:14,0:14:0,42,255
-chr21	35526925	chr21:35526925:M	ATATATAGATATAGATATATATATA	<67.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:16,10:27:31,0,255	0/0:8,0:8:0,24,207	0/0:17,1:19:0,45,255
-chr21	35526949	chr21:35526949:M	ACACACACACACACACACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:14,0:20:0,17,255	1/1:0,7:13:171,25,0	0/0:20,0:20:0,60,255
-chr21	35535564	chr21:35535564:M	AAAAAGAAAGAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:34:0,92,255	0/0:21,1:22:0,47,255	0/1:21,8:30:57,0,255
-chr21	35536843	chr21:35536843:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,119	0/1:7,3:11:17,0,94	0/0:5,1:8:0,4,80
-chr21	35553026	chr21:35553026:M	AAAAAGAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,20:49:255,0,255	0/1:13,17:32:255,0,255	1/1:0,58:61:255,182,0
-chr21	35558605	chr21:35558605:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,9,53	0/0:5,0:7:0,18,95	1/1:1,6:7:85,3,0
-chr21	35578256	chr21:35578256:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,3:43:0,73,255	0/0:33,3:38:0,60,255	0/1:19,27:47:255,0,193
-chr21	35589667	chr21:35589667:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,11:13:161,2,0	1/1:1,15:19:255,37,0	0/1:4,9:14:117,0,39
-chr21	35599704	chr21:35599704:M	GAGGAGGAGGAGGAGGAG	<7>	.	.	Motif=GAG	GT:AD:DP:PL	0/1:18,21:40:255,0,239	0/1:19,21:40:255,0,228	0/0:38,0:38:0,112,255
-chr21	35605494	chr21:35605494:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,22:35:255,0,119	0/1:22,17:41:187,0,255	1/1:0,41:41:255,121,0
-chr21	35610052	chr21:35610052:M	TATATATATATATATATATATATA	<11>,<13>	.	.	Motif=TA	GT:AD:DP:PL	0/2:13,1,9:23:99,146,255,0,184,181	1/2:0,15,3:20:255,59,36,255,0,255	0/1:8,17,0:25:233,0,71,255,122,255
-chr21	35622140	chr21:35622140:M	ATATATATATATATATATATATA	<9.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:1,8,6:19:209,93,146,134,0,204	1/1:0,7,0:7:140,21,0,156,21,196	2/2:1,0,5:8:97,116,174,1,21,0
-chr21	35622162	chr21:35622162:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<17>,<25>	.	.	Motif=AG	GT:AD:DP:PL	0/2:1,0,5:11:82,100,171,0,23,2	1/1:0,3,0:5:88,9,0,88,9,88	0/2:2,0,5:7:79,97,186,0,39,19
-chr21	35622263	chr21:35622263:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,14:24:189,0,104	0/1:9,8:19:95,0,112	0/0:20,0:21:0,61,255
-chr21	35629473	chr21:35629473:M	AAAAAAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,16,11:31:255,213,129,255,0,218	1/2:0,15,9:25:255,152,80,255,0,194	2/2:0,3,25:29:255,255,255,86,32,0
-chr21	35630479	chr21:35630479:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGCGTGTGTGTGT	<25>,<26>,<29>	.	.	Motif=GT	GT:AD:DP:PL	1/3:2,7,0,12:22:255,166,255,255,255,255,158,0,125,151	1/3:1,8,0,2:12:230,16,36,152,61,174,207,0,136,214	1/2:0,8,10,0:21:255,163,104,161,0,106,255,164,161,255
-chr21	35630813	chr21:35630813:M	ACACACACATACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,32:35:255,96,0	1/1:1,31:37:255,72,0	1/1:0,33:35:255,99,0
-chr21	35642006	chr21:35642006:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:21:191,0,242	0/1:15,12:30:237,0,255	0/1:14,13:30:255,0,255
-chr21	35647614	chr21:35647614:M	TTTTTCTTTTTTTTTCCTGTTTTCTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13:15:255,42,0	1/1:0,11:13:255,38,0	1/1:0,14:16:255,47,0
-chr21	35650174	chr21:35650174:M	AAATAAATAAATAAATAAATAAATA	<5.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,26:26:255,77,0	1/1:0,43:43:255,127,0
-chr21	35654188	chr21:35654188:M	CACACACACACACACACACACACACACACACACACACACACA	<19>,<20>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,17,0:19:255,56,0,255,55,255	1/1:0,16,0:18:255,53,0,255,52,255	1/2:1,9,7:18:255,84,80,143,0,113
-chr21	35655703	chr21:35655703:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:18:255,52,0	1/1:0,21:21:255,62,0	1/1:2,27:30:255,52,0
-chr21	35660079	chr21:35660079:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:10:79,0,104	0/1:2,2:4:41,0,41	0/1:2,4:8:98,0,32
-chr21	35671189	chr21:35671189:M	TTTTTTTTTTTTTTTTTTTTTTT	<12>,<27>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,8:15:223,235,255,0,90,57	0/2:1,0,5:10:153,160,198,0,38,14	1/1:2,17,0:19:255,3,0,255,51,255
-chr21	35674619	chr21:35674619:M	TTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTTGTTGTT	<11.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:18,12:32:173,0,255	0/1:16,20:37:255,0,236	0/0:32,3:36:0,39,255
-chr21	35675592	chr21:35675592:M	CCCCCCCCCCCCCC	<13>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,3:4:63,12,0	0/0:1,0:1:0,3,16	0/0:1,0:1:0,3,17
-chr21	35680545	chr21:35680545:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,1:44:0,111,255	0/0:45,0:46:0,135,255	0/1:19,22:43:255,0,229
-chr21	35699740	chr21:35699740:M	ACACACACACACACACACACACACACACACACACACAC	<15>,<17>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,15,11:26:255,255,236,255,0,255	1/2:0,16,10:29:255,254,210,255,0,255	2/2:0,0,24:26:255,255,255,78,72,0
-chr21	35704557	chr21:35704557:M	AGAGAGAGAGAGAGAGAGAGAGA	<14.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:20,11:33:179,0,255	0/1:12,12:25:222,0,233	0/0:37,0:37:0,111,255
-chr21	35704577	chr21:35704577:M	AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<7.5>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:14,8:22:48,0,132	1/1:1,17:18:215,37,0	0/0:27,0:27:0,76,255
-chr21	35704663	chr21:35704663:M	AGAGAAAGAAGAAAGAAAAAGAAAGGAATGAAAGAAAGAGAAAGGGAACGAAAGAAAGGAAAAAGAGATAGAAAAGAGAGACAGAGACAGAGA	<7.3>	.	.	Motif=AGAGAA	GT:AD:DP:PL	1/1:0,4:4:135,12,0	1/1:0,2:2:65,6,0	1/1:0,1:1:35,3,0
-chr21	35704814	chr21:35704814:M	GAAGGAAGGAAGAAAGGAAGGAAGGAAGGAAGAAAGG	<10.2>	.	.	Motif=GAAG	GT:AD:DP:PL	0/1:14,3:17:8,0,215	0/1:11,7:18:74,0,143	0/0:26,0:26:0,77,255
-chr21	35704888	chr21:35704888:M	GAAAGAAAGAGAAAAGAGAAGGAAAGAGAGAGAGACAGACAGAAAAGAAAAGAAAAAAGAAAGAAAGAGAAAGAAAGAAAGGAAGAAAG	<20.2>	.	.	Motif=GAAA	GT:AD:DP:PL	0/1:1,1:2:12,0,13	0/0:2,0:2:0,6,37	1/1:0,4:4:72,12,0
-chr21	35708251	chr21:35708251:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<17.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,14,0:30:255,0,255,237,255,255	0/1:15,15,1:37:255,0,255,255,255,255	0/2:9,0,15:25:255,255,255,0,235,184
-chr21	35711660	chr21:35711660:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,20:25:255,0,18	0/1:7,14:21:181,0,59	0/1:9,6:19:79,0,115
-chr21	35714726	chr21:35714726:M	TGAGGTGAGGTGAGGTGAGGGAGG	<6.8>	.	.	Motif=TGAGG	GT:AD:DP:PL	0/1:17,13:30:255,0,255	0/1:22,12:35:228,0,255	0/1:9,16:25:255,0,175
-chr21	35719552	chr21:35719552:M	TTTTTTGTTTTTGTTTTTGTTTTTGTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:37:255,0,255	0/1:10,20:30:255,0,185	0/0:38,0:38:0,114,255
-chr21	35730163	chr21:35730163:M	TTTTTTTTTGTTTTGGTTTGGTTTGGTTTTTGGTTTTTGATTTTTGTTTTTTTTTTTTGTTTTTTTT	<15>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:5,4:10:87,0,95	0/1:3,6:9:128,0,47	0/1:4,10:15:213,0,67
-chr21	35739972	chr21:35739972:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:61,0,87	0/1:5,13:18:167,0,32	0/1:9,5:16:41,0,128
-chr21	35744789	chr21:35744789:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,8:17:174,0,146	1/1:0,8:9:229,27,0	0/0:14,0:16:0,47,255
-chr21	35768210	chr21:35768210:M	GAGAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGA	<25>	.	.	Motif=GA	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:8,8:16:166,0,169	0/0:22,0:22:0,66,255
-chr21	35782884	chr21:35782884:M	AAATAAATAAATAAAATAAACAATAAATAACAAATAAATAAATAAAATAAACAAATAAA	<16.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,15:15:255,45,0	1/1:0,5:5:122,15,0	1/1:0,9:9:223,27,0
-chr21	35788663	chr21:35788663:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,99,0	1/1:0,32:32:255,96,0	1/1:0,29:29:255,87,0
-chr21	35793298	chr21:35793298:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:39,0,5	0/1:1,4:5:50,0,2	0/1:1,2:3:24,0,8
-chr21	35816065	chr21:35816065:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,30:31:255,91,0	1/1:1,34:36:255,88,0	1/1:0,26:33:255,95,0
-chr21	35832723	chr21:35832723:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,5:33:0,25,255	0/1:25,10:35:35,0,234	0/0:30,7:37:0,10,255
-chr21	35840723	chr21:35840723:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,21:25:255,20,0	1/1:1,20:21:255,45,0	0/1:5,15:21:206,0,26
-chr21	35840875	chr21:35840875:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7,0:8:107,6,0,110,23,135	0/1:2,6,0:8:78,0,11,84,34,135	1/2:2,6,5:14:159,43,49,46,0,89
-chr21	35841486	chr21:35841486:M	TTTTTTTTGTTTTTTTTTTTTTT	<24>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,14,6:22:255,97,54,193,0,196	1/1:1,23,0:24:255,53,0,255,70,255	1/2:2,12,14:29:255,216,173,142,0,149
-chr21	35842576	chr21:35842576:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,16:19:255,56,0	1/1:0,12:12:255,36,0	1/1:0,21:25:255,74,0
-chr21	35843636	chr21:35843636:M	AGATCAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT	<12.2>,<13.2>,<14.2>	.	.	Motif=AGAT	GT:AD:DP:PL	0/1:10,15,0,0:25:220,0,121,250,192,255,255,193,255,255	1/3:0,9,0,14:23:255,255,255,255,253,255,164,0,163,232	0/2:12,0,14,0:26:255,255,255,0,223,255,255,255,255,255
-chr21	35850352	chr21:35850352:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,24:26:255,40,0	1/1:2,33:36:255,60,0	1/1:4,35:40:255,35,0
-chr21	35851419	chr21:35851419:M	TTTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,14:19:255,250,199,91,0,36	2/2:0,1,16:19:255,255,255,51,27,0	2/2:0,1,19:20:255,255,255,60,41,0
-chr21	35874526	chr21:35874526:M	TTTTGTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,14:15:221,27,0	0/1:2,6:10:88,0,4	1/1:2,16:22:237,7,0
-chr21	35880490	chr21:35880490:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:93,17,0	1/1:0,6:7:89,8,0	0/1:2,8:10:111,0,6
-chr21	35894902	chr21:35894902:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,12:21:151,0,98	0/0:24,4:29:0,17,255	0/1:13,8:24:99,0,156
-chr21	35926944	chr21:35926944:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:16:173,0,18	1/1:4,23:29:255,12,0	1/1:4,23:29:255,13,0
-chr21	35942571	chr21:35942571:M	CACACACACACACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/1:20,13:33:255,0,255	0/1:19,15:34:255,0,255
-chr21	35946176	chr21:35946176:M	AGAGAGAGAGAGAGAAAGAAAGAGGGAGAGAGAGAGGGAGAGAGAAGGGGGGGACAGAGAGAGAGAGA	<32>	.	.	Motif=AG	GT:AD:DP:PL	0/0:13,0:14:0,42,255	0/1:3,7:10:166,0,48	0/1:7,7:15:174,0,145
-chr21	35957269	chr21:35957269:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:7,15:25:192,0,64	0/1:11,4:19:58,0,141
-chr21	35960221	chr21:35960221:M	TCTCTCTCTCTCTCTCTCTCTCTCT	<11.5>,<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:18,9,0:27:44,0,163,119,190,255	0/2:4,3,7:14:52,51,143,0,4,47	0/2:12,0,9:21:59,117,255,0,126,99
-chr21	35960245	chr21:35960245:M	TATATATATATATATACATATACATATATATATAT	<19.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:1,16:20:255,28,0	1/1:0,4:4:88,12,0	1/1:0,9:10:200,27,0
-chr21	35960440	chr21:35960440:M	TGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGG	<9.8>,<12.8>	.	.	Motif=TGGA	GT:AD:DP:PL	2/2:0,0,26:26:255,255,255,77,78,0	1/2:0,7,5:12:255,89,109,185,0,170	1/2:0,16,10:26:255,185,219,255,0,255
-chr21	35965382	chr21:35965382:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,2:27:0,45,255	0/1:9,16:26:198,0,73	0/1:11,11:24:126,0,125
-chr21	35966749	chr21:35966749:M	TTTTTTGTTTTGTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:23:0,63,255	0/1:11,5:16:81,0,248	0/1:7,8:17:177,0,141
-chr21	35967625	chr21:35967625:M	TTTTTTGTTGTTTGTTTTTGTTTGTTTTTTTTTTGTATGTTTGTTTTTTTTTT	<52>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,46,255	0/1:7,13:20:174,0,65	0/1:14,10:24:115,0,182
-chr21	35968833	chr21:35968833:M	GAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAG	<17.5>	.	.	Motif=GA	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:14,14:29:158,0,158	0/1:15,10:25:104,0,192
-chr21	35970172	chr21:35970172:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:24:0,51,255	0/1:13,5:18:34,0,174	0/1:9,10:21:122,0,114
-chr21	35975950	chr21:35975950:M	GAATGAGATAGAATGAAAATAATGAATGAATGAATGAATGAATGA	<10.2>	.	.	Motif=GAAT	GT:AD:DP:PL	0/0:20,0:20:0,59,255	0/1:24,12:36:114,0,255	0/1:10,9:19:115,0,131
-chr21	35982990	chr21:35982990:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,6,0:17:54,0,132,103,178,255	0/1:9,4,0:14:36,0,107,75,147,255	0/2:4,0,4:8:88,99,155,0,67,95
-chr21	35985925	chr21:35985925:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:66,0,5	0/1:1,1:2:14,0,14	1/1:0,0:3:16,3,0
-chr21	35985941	chr21:35985941:M	ATATATATATATATATATATATATATATGTATAT	<15>,<17.5>,<19>	.	.	Motif=AT	GT:AD:DP:PL	2/3:0,0,4,7:12:174,196,255,129,137,106,20,72,0,38	1/3:0,3,0,1:4:86,23,17,85,18,87,70,0,74,74	1/3:0,6,0,1:8:154,23,4,155,18,159,140,0,147,148
-chr21	35988750	chr21:35988750:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,0,0:12:0,32,255,24,255,255	0/1:5,6,0:15:197,0,129,132,155,255	0/2:2,2,6:13:207,88,130,0,30,34
-chr21	35990734	chr21:35990734:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:15:0,25,215	0/1:11,14:27:173,0,112	0/1:8,4:12:35,0,106
-chr21	35991721	chr21:35991721:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:36:0,84,255	0/1:11,13:27:246,0,174	0/1:16,16:34:255,0,255
-chr21	35999299	chr21:35999299:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,16:26:226,0,112	0/1:26,19:47:220,0,255	0/0:41,1:42:0,106,255
-chr21	36002580	chr21:36002580:M	AAAAAAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<62>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,0:24:0,72,255	0/0:7,0:7:0,21,193	0/1:10,4:14:68,0,234
-chr21	36011661	chr21:36011661:M	TTTTTTTTTTTTTTTCTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,16:26:220,0,108	1/1:1,23:26:255,58,0	0/1:12,11:23:131,0,149
-chr21	36012783	chr21:36012783:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:26:198,0,124	0/1:11,16:28:206,0,110	0/0:22,1:24:0,52,255
-chr21	36015896	chr21:36015896:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:39,0:42:0,122,255	0/1:21,6:27:23,0,255	0/1:19,12:35:127,0,251
-chr21	36018714	chr21:36018714:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,3:12:20,36,187,0,105,123	2/2:0,0,9:9:157,182,255,26,27,0	0/1:8,11,0:21:158,0,82,212,120,255
-chr21	36022333	chr21:36022333:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:47,0:49:0,144,255	0/1:15,23:39:255,0,165	0/1:20,17:38:214,0,255
-chr21	36023845	chr21:36023845:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,2:14:0,6,178	0/1:5,2:7:13,0,64	0/1:4,8:13:100,0,41
-chr21	36026541	chr21:36026541:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0,0:24:0,70,255,72,255,255	0/1:8,7,1:17:85,0,94,85,121,255	0/2:16,1,12:32:255,210,255,0,255,255
-chr21	36027264	chr21:36027264:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19:34:255,0,162	0/1:32,25:58:255,0,255	0/0:54,1:57:0,149,255
-chr21	36028188	chr21:36028188:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,19:34:255,0,179	0/0:34,0:34:0,100,255	0/1:21,13:35:133,0,255
-chr21	36029251	chr21:36029251:M	AAAAAAAAAAAAAAGAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,6:32:89,0,255	0/1:2,10:13:229,0,13	0/0:13,0:15:0,42,255
-chr21	36037605	chr21:36037605:M	AAAAAAAAAAAAAAAATAGAAAAGAAAAAGAAAAAATAAAAATAAAAAA	<50>,<51>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1,0:10:0,9,128,24,151,227	0/2:3,2,3:10:55,21,67,0,39,79	0/1:2,7,0:9:97,0,9,103,35,152
-chr21	36041897	chr21:36041897:M	AAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,21,0:45:255,0,255,255,255,255	1/2:0,30,24:55:255,255,255,255,0,255	0/2:26,1,19:50:255,255,255,0,255,255
-chr21	36048718	chr21:36048718:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,2:14:16,0,143	1/1:0,7:9:120,14,0	0/1:9,4:13:33,0,123
-chr21	36052385	chr21:36052385:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:17,0,53	1/1:0,1:2:18,4,0	0/1:7,6:14:62,0,90
-chr21	36058506	chr21:36058506:M	AAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:187,0,174	0/1:11,9:25:180,0,255	0/0:21,0:22:0,66,255
-chr21	36062811	chr21:36062811:M	AAAACAAAACAAAACAAAACAAAA	<5.8>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:22,12:34:132,0,255	0/1:15,17:32:215,0,179	0/0:31,0:31:0,92,255
-chr21	36065532	chr21:36065532:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,8:22:82,0,183	0/1:9,14:24:173,0,95	0/0:22,1:23:0,50,255
-chr21	36070854	chr21:36070854:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<26>,<28>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,13:21:177,206,255,0,66,62	2/2:2,0,11:16:179,215,255,10,39,0	0/1:4,3,2:9:27,0,67,18,24,98
-chr21	36074330	chr21:36074330:M	TTTATTTATTTATTTATTTATTTGTTTGTTTGTTTGTTTGTTTATT	<10.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:7,3:10:27,0,103	1/1:0,13:13:233,38,0	0/1:20,7:27:50,0,255
-chr21	36076015	chr21:36076015:M	AACAACAACAACAA	<5.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:28,14:42:148,0,255	0/1:28,20:48:224,0,255	0/0:63,0:63:0,186,255
-chr21	36076746	chr21:36076746:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,21:45:255,0,255	0/1:22,17:39:185,0,255	0/0:47,1:48:0,123,255
-chr21	36079609	chr21:36079609:M	TTTTTTTTTGTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:146,0,184	0/1:25,14:40:129,0,255	0/0:37,0:37:0,109,255
-chr21	36080802	chr21:36080802:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,2:13:0,3,158	0/1:2,6:10:84,0,8	0/1:8,8:20:111,0,83
-chr21	36081135	chr21:36081135:M	AAAAAAAAAAAAAGAAAAAGAAAAGAAAAGAAAA	<33>,<36>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,15,0:28:198,0,161,255,239,255	1/2:0,15,10:26:255,251,209,255,0,255	0/2:11,1,7:19:141,160,255,0,180,255
-chr21	36082608	chr21:36082608:M	TTTTTTTTTTTTTTTTTTTTTT	<18>,<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,7,4,1:21:255,0,144,84,111,234,255,90,174,255	2/3:0,0,7,7:15:255,251,255,121,195,167,195,121,0,166	0/3:5,0,0,1:8:7,28,195,18,184,181,0,97,95,77
-chr21	36084184	chr21:36084184:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:12:72,0,73	1/1:2,14:19:205,9,0	0/1:6,5:12:53,0,79
-chr21	36086854	chr21:36086854:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,51	0/1:1,3:4:37,0,5	1/1:0,1:1:17,3,0
-chr21	36089404	chr21:36089404:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:3:0,8,40	0/1:0,1:3:20,0,3	0/1:4,3:8:29,0,59
-chr21	36092423	chr21:36092423:M	TATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT	<12>,<13.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,3,3:7:159,44,24,51,0,31	1/2:0,1,3:5:102,42,28,26,0,13	1/2:0,2,5:8:167,71,52,29,0,9
-chr21	36096200	chr21:36096200:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,15:30:192,0,191	0/0:27,1:28:0,65,255	0/1:23,13:36:131,0,255
-chr21	36096365	chr21:36096365:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:17:192,32,0	0/1:8,8:19:70,0,59	0/0:12,1:15:0,23,149
-chr21	36112325	chr21:36112325:M	AAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,5,0:21:86,0,255,94,255,255	0/1:11,6,0:17:111,0,255,98,255,255	1/2:0,6,5:14:255,87,56,102,0,86
-chr21	36113676	chr21:36113676:M	CACACACACACACACACACACAC	<7.5>,<10.5>	.	.	Motif=CA	GT:AD:DP:PL	2/2:1,0,5:8:66,78,166,9,21,0	1/2:0,5,2:7:146,23,35,126,0,120	0/0:6,0,0:6:0,18,174,16,89,71
-chr21	36114246	chr21:36114246:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,4:9:45,68,222,0,69,45	0/1:1,1,0:7:43,0,18,26,11,33	1/2:0,7,5:15:255,86,108,195,0,174
-chr21	36115229	chr21:36115229:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,8,0:11:111,0,21,141,45,251	0/2:6,1,6:14:72,92,224,0,69,72	1/2:2,7,8:20:210,106,168,120,0,183
-chr21	36116142	chr21:36116142:M	TTTTTCTTTCTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:22,1:25:0,53,255	0/1:19,14:35:155,0,255
-chr21	36118512	chr21:36118512:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,6,57	0/1:4,3:9:63,0,92	0/0:2,0:4:0,12,84
-chr21	36122200	chr21:36122200:M	AAAAAAGAAAAAAAAAAAAAAAA	<22>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0,0:21:0,61,255,60,255,255	0/1:17,9,0:27:84,0,207,160,255,255	0/2:12,0,8:21:165,207,255,0,206,255
-chr21	36123192	chr21:36123192:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAAAATA	<11>,<12>	.	.	Motif=AAAT	GT:AD:DP:PL	0/2:7,0,12:19:178,199,255,0,133,80	0/1:3,4,0:7:97,0,65,72,53,107	2/2:1,0,9:10:152,155,182,11,29,0
-chr21	36124861	chr21:36124861:M	AAAAAAGAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,23:44:255,0,255	0/0:31,1:32:0,76,255	1/1:0,34:37:255,107,0
-chr21	36127575	chr21:36127575:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:12:0,35,209	0/0:12,0:12:0,35,200	0/1:4,4:8:45,0,45
-chr21	36128711	chr21:36128711:M	TTTTTCTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,0:23:0,57,255	0/1:9,6:18:49,0,96	0/0:30,0:31:0,90,255
-chr21	36131912	chr21:36131912:M	AAATAAATAAATAAATAAATAATTTAAAAAATAAATAAA	<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:10,9:26:71,0,119	0/1:7,5:18:38,0,68	1/1:0,25:33:255,45,0
-chr21	36133767	chr21:36133767:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,6,1:8:201,119,100,24,5,0,121,77,6,101	0/1:2,9,1,0:13:248,0,25,134,37,161,238,52,189,255	2/3:0,1,11,5:17:255,255,255,87,69,38,201,143,0,155
-chr21	36133848	chr21:36133848:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:24:255,69,0	1/1:1,9:10:139,12,0	0/1:12,11:23:129,0,147
-chr21	36136309	chr21:36136309:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,12,1:31:144,0,247,172,255,255	0/2:7,2,11:21:255,161,238,0,101,157	1/2:1,14,13:29:255,214,155,198,0,185
-chr21	36137028	chr21:36137028:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,6:10:246,123,99,35,0,6	0/0:0,0,0:1:0,0,0,0,0,0	1/2:0,3,4:7:197,67,47,51,0,30
-chr21	36137467	chr21:36137467:M	AAAGAAAGAGAAAGAAAGAAAGAAAAGAAAAGAAAGAAAG	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:17,2:19:0,12,255	0/1:7,4:13:72,0,135	0/0:30,1:31:0,68,255
-chr21	36137504	chr21:36137504:M	AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<7.5>,<11.5>,<12.5>,<13.5>	.	.	Motif=AAGG	GT:AD:DP:PL	2/4:0,0,19,0,11:30:255,255,255,191,255,248,255,255,190,255,255,255,0,255,255	3/4:1,0,1,6,12:20:255,255,255,255,255,255,150,210,192,154,95,113,67,0,56	1/2:0,27,17,0,0:44:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255
-chr21	36138104	chr21:36138104:M	TTTAGTTTAGTTTAGTTTAGTTTAGTTTAGTTTTGTTTTGTTT	<6.6>,<9.6>	.	.	Motif=TTTAG	GT:AD:DP:PL	0/1:14,10,0:24:210,0,255,253,255,255	0/0:21,0,0:21:0,63,255,62,255,255	1/2:0,13,14:27:255,255,255,255,0,255
-chr21	36138720	chr21:36138720:M	TTTTCTTTTCTTTTTTTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,16:18:255,15,0	0/0:3,0:4:0,9,88	0/1:5,9:16:226,0,104
-chr21	36139377	chr21:36139377:M	TTTTTCTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,1,4:13:36,41,221,0,81,94	0/2:7,0,7:15:74,114,255,0,117,84	1/2:2,7,6:20:238,71,145,158,0,186
-chr21	36139882	chr21:36139882:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:6:0,7,72	0/1:8,4:13:25,0,99	1/1:0,1:3:38,8,0
-chr21	36141262	chr21:36141262:M	AAAAAAAAAAAAAAA	<17>,<18>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/2:14,1,6,0:21:131,88,255,0,255,255,173,255,255,255	0/2:10,1,7,0:20:174,105,255,0,249,255,206,255,255,255	1/3:1,3,2,3:10:159,63,75,80,55,93,73,0,18,92
-chr21	36143880	chr21:36143880:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:12:122,0,28	0/1:3,6:12:139,0,43	0/1:5,3:8:54,0,105
-chr21	36145961	chr21:36145961:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1,0:11:0,4,229,21,158,150	1/2:1,5,3:10:160,25,34,75,0,66	0/0:9,0,0:10:0,30,255,29,191,166
-chr21	36146908	chr21:36146908:M	TCTCTCTCTCTCTCTCT	<5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:8,3:11:56,0,166	0/0:17,0:19:0,55,255	1/1:0,5:5:148,15,0
-chr21	36148538	chr21:36148538:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:27:0,79,255	0/1:14,12:28:128,0,182	0/0:20,0:23:0,64,255
-chr21	36152312	chr21:36152312:M	AAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:17:0,16,255	0/1:2,4:11:109,0,29	0/0:7,0:8:0,21,195
-chr21	36154077	chr21:36154077:M	AAAAAAAAAAAAAAAGAAAGAAAAAA	<24>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0,1:17:0,37,255,21,209,181	0/1:11,9,0:20:203,0,255,152,186,255	2/2:0,1,8:11:152,127,124,26,9,0
-chr21	36154429	chr21:36154429:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13,0:27:166,0,166,238,205,255	0/2:12,0,11:24:139,204,255,0,177,141	1/1:4,24,0:28:255,10,0,255,72,255
-chr21	36155067	chr21:36155067:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,19,0:33:255,0,255,255,229,255	0/2:16,1,17:36:209,236,255,0,255,200	1/2:0,24,18:42:255,255,207,255,0,255
-chr21	36155104	chr21:36155104:M	TTTTTTTTTTGTTGTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:33:191,0,173	0/0:43,1:44:0,112,255	1/1:0,33:34:255,99,0
-chr21	36158803	chr21:36158803:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:27,0,204	0/0:9,0:12:0,29,255	1/1:0,11:15:255,36,0
-chr21	36161139	chr21:36161139:M	TGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,0:28:0,84,255	0/0:43,0:43:0,129,255	0/1:27,16:43:255,0,255
-chr21	36163345	chr21:36163345:M	AAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,1:15:0,19,255	0/0:17,0:18:0,54,255	1/1:0,3:5:99,14,0
-chr21	36163357	chr21:36163357:M	AAAGAAAGAAAGAAAG	<2.2>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:15,1:18:14,0,255	0/1:11,4:17:102,0,255	1/1:0,3:7:149,18,0
-chr21	36165719	chr21:36165719:M	TTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7,1:21:78,0,161,90,196,255	0/2:7,2,3:12:56,22,109,0,90,168	0/1:6,2,1:11:15,0,98,13,106,181
-chr21	36166437	chr21:36166437:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/1:13,12:25:139,0,156	0/0:34,0:35:0,103,255
-chr21	36167915	chr21:36167915:M	TTTTCTTTTCTTTTCTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,5:7:146,0,40	0/0:3,0:6:0,13,118	1/1:0,2:4:96,12,0
-chr21	36170609	chr21:36170609:M	ATATATATATATA	<9.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:34,0:36:0,89,255	0/0:16,0:16:0,48,255	0/1:21,16:39:255,0,255
-chr21	36170802	chr21:36170802:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,3:28:0,28,255	0/1:6,11:18:137,0,61	0/0:28,5:33:0,9,255
-chr21	36173425	chr21:36173425:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,0,6:19:56,110,255,0,204,186	0/0:22,0,0:24:0,47,255,66,255,255	1/2:1,12,6:20:255,99,130,199,0,255
-chr21	36173868	chr21:36173868:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,21:42:255,0,255	0/0:39,3:46:0,62,255	0/1:18,17:37:218,0,220
-chr21	36175117	chr21:36175117:M	TTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,8:26:146,0,255	0/0:26,1:28:0,47,255	0/1:20,16:38:255,0,255
-chr21	36176088	chr21:36176088:M	GTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTG	<23.5>,<27.5>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,14:19:255,255,255,53,53,0	1/2:0,17,13:32:255,255,255,255,0,255	2/2:0,0,13:19:255,255,255,51,51,0
-chr21	36178438	chr21:36178438:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:28:125,0,226	0/1:12,11:24:127,0,145	0/0:32,3:36:0,51,255
-chr21	36180579	chr21:36180579:M	AAAAAAAGAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,101,0	0/1:16,20:36:255,0,185	0/1:22,22:44:255,0,255
-chr21	36180886	chr21:36180886:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,17:36:222,0,208	0/0:26,1:28:0,64,255	0/1:16,15:35:184,0,206
-chr21	36183867	chr21:36183867:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,5:17:105,0,186	0/1:11,8:22:154,0,255	0/0:32,0:34:0,101,255
-chr21	36190010	chr21:36190010:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,5:15:63,0,100	0/1:7,3:12:28,0,87	0/0:11,1:13:0,10,165
-chr21	36191256	chr21:36191256:M	AAAAAAAAAAAAACAAAAAACAGAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:29:255,67,0	0/1:13,13:26:154,0,153	0/1:15,20:35:255,0,170
-chr21	36192392	chr21:36192392:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:18:164,0,179	0/0:19,0:22:0,60,255	0/1:10,4:14:66,0,231
-chr21	36192694	chr21:36192694:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:20:156,0,92	0/0:39,0:39:0,115,255	0/1:17,9:26:89,0,235
-chr21	36194488	chr21:36194488:M	TTTTTTTTTTTTTTTTT	<16>,<18>,<20>,<23>	.	.	Motif=T	GT:AD:DP:PL	3/4:0,1,1,5,3:11:162,164,175,130,123,122,41,38,41,54,73,79,46,0,121	1/2:1,3,3,2,0:10:43,38,64,16,0,27,11,12,18,113,66,82,55,135,235	0/4:5,0,0,0,5:13:127,142,182,131,164,160,110,155,152,213,0,55,35,104,131
-chr21	36195341	chr21:36195341:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:5:37,0,20	0/0:2,0:3:0,8,44	0/1:4,2:9:20,0,64
-chr21	36199443	chr21:36199443:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:29,16:45:255,0,255	0/1:24,8:33:107,0,255	0/0:23,0:23:0,69,255
-chr21	36206011	chr21:36206011:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,33:35:255,66,0	0/1:23,18:44:201,0,255	0/1:14,20:34:255,0,156
-chr21	36206530	chr21:36206530:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,14:27:193,0,122	0/1:8,9:18:111,0,86	0/0:32,0:33:0,97,255
-chr21	36217075	chr21:36217075:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:78,2,0	0/1:5,3:8:26,0,60	1/1:1,6:7:85,3,0
-chr21	36220668	chr21:36220668:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,6:12:74,0,65	0/1:13,9:24:104,0,155	1/1:0,19:22:255,61,0
-chr21	36228766	chr21:36228766:M	AAAATAAATAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<10.4>,<11.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,9,0:9:255,27,0,198,27,175	1/2:0,2,7:9:158,107,101,36,0,10	1/1:0,12,0:12:255,36,0,255,35,227
-chr21	36231845	chr21:36231845:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:18:255,54,0	1/1:0,11:14:255,38,0	1/1:0,18:18:255,54,0
-chr21	36236751	chr21:36236751:M	TTTTTTTCTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<45>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:7:112,20,0	0/1:2,4:6:47,0,15	1/1:0,3:4:61,11,0
-chr21	36241676	chr21:36241676:M	TTTTTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTT	<35>,<36>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,9:15:255,133,115,94,0,55	1/1:0,6,0:6:164,18,0,117,18,101	1/2:0,8,3:12:241,44,17,142,0,112
-chr21	36242152	chr21:36242152:M	ATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:11,0:11:0,32,195	0/1:12,12:24:149,0,149
-chr21	36243350	chr21:36243350:M	TTTTTTTTTCCTTTTCTTCTTTTTTTTTTTTTTTT	<34>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,1:26:0,58,255	0/1:12,5:19:31,0,168	0/0:20,1:22:0,44,255
-chr21	36246844	chr21:36246844:M	TTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTATGTTAT	<8.8>,<9.8>	.	.	Motif=TTATG	GT:AD:DP:PL	1/1:0,23,0:24:255,70,0,255,69,255	1/1:0,20,0:21:255,63,0,255,62,255	1/2:0,10,7:17:255,112,82,186,0,139
-chr21	36257588	chr21:36257588:M	TAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAAGTAGTTAGGTAAATAGATAGAT	<14>	.	.	Motif=TAGA	GT:AD:DP:PL	0/1:12,4:16:55,0,253	0/1:10,3:13:38,0,212	0/1:11,5:16:80,0,228
-chr21	36260154	chr21:36260154:M	AAAAAGAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:34:243,0,180	1/1:1,30:33:255,79,0	0/1:14,13:27:157,0,175
-chr21	36272650	chr21:36272650:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:11:3,0,117	0/1:6,3:11:18,0,88	0/0:18,0:18:0,53,255
-chr21	36286640	chr21:36286640:M	ACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:10,10:20:124,0,124	1/1:0,26:27:255,79,0	0/1:15,13:29:160,0,182
-chr21	36289425	chr21:36289425:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21.5>,<26.5>,<27.5>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,5,0,8:13:255,216,204,255,144,255,147,0,147,123	1/2:1,11,5,1:18:255,77,120,255,0,255,255,78,255,255	2/3:1,0,8,5:15:245,255,255,73,92,48,104,155,0,114
-chr21	36302779	chr21:36302779:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAGAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:6:139,18,0	1/1:0,6:6:171,18,0	1/1:0,3:5:99,12,0
-chr21	36305752	chr21:36305752:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:22:0,46,255	0/1:12,11:23:126,0,143	0/1:17,21:38:255,0,196
-chr21	36306937	chr21:36306937:M	AAAAAAAAAAAAAAGAAAAAGAAAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,11:19:145,197,255,0,124,91	1/2:0,10,4:15:209,76,79,169,0,230	0/1:13,13,1:28:161,0,163,218,178,255
-chr21	36307652	chr21:36307652:M	AAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:21:0,61,255	0/1:9,6:21:132,0,219	0/1:4,3:10:60,0,101
-chr21	36308874	chr21:36308874:M	TTTATTTATTTATTTATTTATTTATTTATTTATTT	<11.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:8,5:13:100,0,186	0/1:13,3:16:36,0,255	1/1:0,9:9:254,27,0
-chr21	36309316	chr21:36309316:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:6:19,0,54	0/1:1,1:2:11,0,11	1/1:0,14:16:255,47,0
-chr21	36310424	chr21:36310424:M	TTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,14:34:255,0,255	0/0:23,0:23:0,69,255	0/1:26,4:31:31,0,255
-chr21	36313320	chr21:36313320:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,6:24:34,0,243	0/0:18,0:25:0,68,255	0/0:20,3:25:0,9,255
-chr21	36318465	chr21:36318465:M	AAAAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:17:0,50,255	0/1:9,9:19:108,0,102	0/0:23,0:23:0,68,255
-chr21	36327156	chr21:36327156:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:3:0,6,45	1/1:0,5:6:159,15,0	0/0:3,0:5:0,9,94
-chr21	36328343	chr21:36328343:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:8:0,23,125	0/1:2,3:6:39,0,13	0/1:8,4:12:27,0,88
-chr21	36328907	chr21:36328907:M	AAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,13:23:255,0,131	0/1:10,8:22:165,0,226	0/1:12,8:24:153,0,255
-chr21	36329295	chr21:36329295:M	AAAAACAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:22:0,65,255	0/1:11,16:30:255,0,236	0/0:22,0:25:0,74,255
-chr21	36331602	chr21:36331602:M	AAAAAAACAAAAAACAAACAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:21:186,0,255	0/1:13,13:27:255,0,255	0/1:17,14:31:255,0,255
-chr21	36332791	chr21:36332791:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,10:27:116,0,216	0/1:11,4:17:32,0,154	0/1:16,8:25:71,0,226
-chr21	36335311	chr21:36335311:M	TTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:22,0,51	0/1:2,2:7:64,0,43	0/1:6,3:10:72,0,151
-chr21	36343093	chr21:36343093:M	GTTTTTTTGTTTGTTTGTTTG	<5>	.	.	Motif=GTTT	GT:AD:DP:PL	0/1:24,18:42:255,0,255	0/1:22,18:40:255,0,255	0/1:19,27:46:255,0,255
-chr21	36343450	chr21:36343450:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:26:185,0,255	0/1:14,9:24:184,0,255	0/1:9,18:30:255,0,172
-chr21	36347008	chr21:36347008:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:19:11,0,171	0/0:11,0:15:0,41,221	0/1:7,6:15:62,0,92
-chr21	36350543	chr21:36350543:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,6:16:70,0,115	0/1:10,7:18:77,0,118	0/1:6,8:16:97,0,71
-chr21	36370599	chr21:36370599:M	ATATACATACATACATATATATATATATATATATATATATAT	<18.5>,<20.5>,<21.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:3,3,1,0:9:47,0,85,46,19,56,52,11,51,67	0/1:1,1,0,0:2:18,0,18,18,5,19,21,5,21,26	2/3:0,0,4,3:8:18,36,143,9,31,11,19,43,0,31
-chr21	36370670	chr21:36370670:M	TTCTTCTTCTTCTT	<6.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:4,3:7:50,0,75	1/1:0,0:1:7,2,0	1/1:0,2:2:47,6,0
-chr21	36371799	chr21:36371799:M	TGTTTTGTTTTGTTTTGTTTTTTTTTTTT	<5.6>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:9,11:20:157,0,118	0/0:17,1:18:0,33,255	0/1:8,12:22:179,0,100
-chr21	36381288	chr21:36381288:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,13,3:18:255,69,51,240,0,255	0/1:13,17,1:31:211,0,149,255,177,255	1/2:2,10,11:25:255,174,250,157,0,233
-chr21	36382523	chr21:36382523:M	TTTTTCTTTTTCTTTCTTTTTTTTTTTTTTTTTTT	<21>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,5:22:255,103,100,255,0,255	0/2:7,0,4:11:37,69,255,0,120,89	1/2:0,17,8:25:255,140,153,255,0,255
-chr21	36382695	chr21:36382695:M	TTATTATTATTATTATTATTATTATT	<7.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/1:10,20:30:255,0,105	0/1:11,14:26:188,0,124	0/1:13,16:30:222,0,157
-chr21	36383088	chr21:36383088:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:14:233,40,0	0/1:3,4:8:48,0,30	1/1:1,10:12:166,17,0
-chr21	36388469	chr21:36388469:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:11:100,0,111	0/1:7,2:11:27,0,159	0/1:3,4:8:92,0,57
-chr21	36389760	chr21:36389760:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	0/0:11,0:11:0,33,255	0/1:9,5:16:86,0,189	0/0:8,0:18:0,32,245
-chr21	36396654	chr21:36396654:M	AAAAAAAAAAGAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,14:27:174,0,156	0/0:39,0:42:0,122,255	0/1:11,12:23:146,0,128
-chr21	36397392	chr21:36397392:M	GTGTGTGTGTGT	<6.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:22,23:45:177,0,163	0/0:57,0:57:0,160,255	0/1:17,31:48:255,0,89
-chr21	36397720	chr21:36397720:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:9,0,26	0/1:3,3:6:33,0,33	0/0:2,0:4:0,11,58
-chr21	36404097	chr21:36404097:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,1:13:0,6,134	0/0:9,0:10:0,26,150	0/1:3,3:8:28,0,52
-chr21	36404400	chr21:36404400:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,9:30:86,0,255	0/0:34,1:36:0,88,255	0/1:12,11:25:125,0,162
-chr21	36404733	chr21:36404733:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,1:3:29,3,0	1/1:0,2:4:82,12,0	1/1:0,3:6:109,14,0
-chr21	36407301	chr21:36407301:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:14:16,0,141	0/0:12,2:14:0,7,171	0/1:8,6:16:68,0,104
-chr21	36411117	chr21:36411117:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:25:255,71,0	1/1:1,32:34:255,82,0	1/1:0,25:27:255,76,0
-chr21	36417329	chr21:36417329:M	TTTTTTTTCTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,21:43:255,0,255	0/0:33,0:35:0,100,255	0/1:18,24:43:255,0,255
-chr21	36418849	chr21:36418849:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:13:29,0,101	0/0:9,0:9:0,26,155	0/1:12,10:23:118,0,145
-chr21	36420337	chr21:36420337:M	TTCATTCATTCATTCATTCATTCATTCATTCATTCA	<10>,<11>	.	.	Motif=TTCA	GT:AD:DP:PL	0/2:21,0,10:31:202,191,255,0,255,255	1/2:0,10,9:19:255,162,109,154,0,127	0/1:17,21,0:38:255,0,211,255,255,255
-chr21	36433912	chr21:36433912:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18:40:233,0,255	0/0:23,0:26:0,75,255	0/1:11,14:26:182,0,136
-chr21	36436383	chr21:36436383:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,2:5:47,0,40	0/1:3,3:6:58,0,62	0/1:1,1:2:20,0,21
-chr21	36436914	chr21:36436914:M	ATATATATATA	<4.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,39:40:255,118,0	0/1:21,18:39:199,0,246	1/1:0,40:40:255,118,0
-chr21	36437842	chr21:36437842:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:19,0:23:0,66,255	0/1:9,5:14:48,0,119
-chr21	36438131	chr21:36438131:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,6,1:13:97,0,14,98,6,173	0/2:2,0,5:9:64,83,151,0,28,13	1/2:3,8,3:19:140,15,50,120,0,217
-chr21	36441053	chr21:36441053:M	CCCCGCCCCCACCCCC	<3.7>	.	.	Motif=CCCCAC	GT:AD:DP:PL	0/1:13,4:17:26,0,192	0/1:11,13:24:163,0,127	0/1:9,12:21:161,0,104
-chr21	36442154	chr21:36442154:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:19:18,0,220	0/0:28,1:30:0,70,255	0/1:17,10:29:101,0,229
-chr21	36443922	chr21:36443922:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:8:192,23,0	1/1:0,4:6:128,15,0	1/1:0,6:6:170,18,0
-chr21	36444734	chr21:36444734:M	AAAAAAAAAAAAAAAAAAA	<20>,<25>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,1,4,0:6:94,84,94,0,0,27,97,97,39,134	1/3:1,1,0,3:7:86,67,74,83,73,118,10,0,48,39	1/2:1,3,2,0:9:74,37,40,32,0,83,83,51,90,139
-chr21	36448351	chr21:36448351:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,2,4:10:64,24,118,0,34,41	0/1:2,3,0:6:68,0,41,50,33,69	0/2:5,0,3:9:25,43,175,0,92,69
-chr21	36448769	chr21:36448769:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:54,0:55:0,162,255	0/1:26,13:39:116,0,255	0/0:51,4:57:0,94,255
-chr21	36449331	chr21:36449331:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:33:0,98,255	0/1:13,10:27:201,0,255	0/0:35,0:36:0,108,255
-chr21	36450532	chr21:36450532:M	AAAAAAACAAAACAAAACAAAACAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:11,11:22:236,0,238	0/0:31,0:31:0,93,255
-chr21	36450893	chr21:36450893:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:32:0,75,255	0/1:13,9:23:94,0,178	0/0:34,0:35:0,103,255
-chr21	36451305	chr21:36451305:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:3,0,3:8:31,53,168,0,66,49	0/1:6,3,2:12:63,0,161,51,67,128	0/2:5,0,3:9:36,52,201,0,84,61
-chr21	36454621	chr21:36454621:M	ACACACACACACACACACACACACACACACACACACACACACAC	<14>,<17>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,17,20:40:255,255,255,255,0,255	0/2:5,0,10:16:255,255,255,0,125,92	1/2:0,17,10:28:255,255,217,255,0,255
-chr21	36457708	chr21:36457708:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:91,0,31	0/1:3,7:10:89,0,21	0/1:4,6:10:74,0,40
-chr21	36459018	chr21:36459018:M	CAAACAAACAAACAAA	<3>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:14,21:35:255,0,168	0/0:24,0:24:0,71,255	0/1:16,17:33:223,0,204
-chr21	36459962	chr21:36459962:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:26:225,0,252	0/0:17,0:19:0,56,255	0/1:14,6:26:102,0,255
-chr21	36476456	chr21:36476456:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,15:18:252,16,0	1/1:2,24:26:255,41,0	1/1:1,18:20:255,31,0
-chr21	36485854	chr21:36485854:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,19:46:230,0,255	0/0:34,1:39:0,92,255	0/1:22,17:41:183,0,255
-chr21	36488221	chr21:36488221:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<15.5>,<16.5>	.	.	Motif=CCTT	GT:AD:DP:PL	1/1:0,4,0:5:123,12,0,83,12,72	1/2:0,2,0:5:96,22,11,49,0,36	2/2:0,0,3:4:95,61,53,9,9,0
-chr21	36489118	chr21:36489118:M	AAAAAAAAAAAAAAA	<16>,<20>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,7:9:246,245,244,27,27,0	1/2:0,3,0:4:39,14,6,32,0,76	1/2:0,2,5:9:146,132,134,12,0,41
-chr21	36490945	chr21:36490945:M	CACAGACACACACACACACACACACACACACACACACACACACAC	<20.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,6,6:12:255,93,75,109,0,75	1/1:0,22,0:24:255,72,0,255,70,255	1/2:0,14,8:25:255,121,70,255,0,221
-chr21	36496437	chr21:36496437:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12,0:15:255,42,0,255,41,238	1/2:0,3,3:6:118,42,33,50,0,33	1/2:0,3,7:12:194,102,87,68,0,39
-chr21	36501924	chr21:36501924:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,38:39:255,114,0	1/1:0,37:40:255,116,0	1/1:1,38:40:255,99,0
-chr21	36514623	chr21:36514623:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,12:14:255,41,0	1/1:0,12:15:255,44,0	1/1:0,8:10:235,25,0
-chr21	36515790	chr21:36515790:M	TTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:118,12,0	1/1:0,4:6:118,13,0	1/1:0,5:6:157,18,0
-chr21	36518076	chr21:36518076:M	ACACACACACACACACACACACACACACACACAC	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,15,20:35:255,255,255,255,0,178	2/2:0,2,29:32:255,255,255,95,58,0	1/1:0,37,0:38:255,114,0,255,112,255
-chr21	36518598	chr21:36518598:M	CAAACAAACAAACAAACAAACAA	<6.8>	.	.	Motif=CAAA	GT:AD:DP:PL	1/1:0,32:34:255,70,0	1/1:0,31:34:255,54,0	1/1:0,36:39:255,69,0
-chr21	36519710	chr21:36519710:M	AAAAACAACAACAACAACAACAACAAAACCCCAAAAACAAAAA	<7.7>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,24:24:255,71,0	1/1:0,30:30:255,89,0	1/1:0,27:30:255,80,0
-chr21	36523760	chr21:36523760:M	AAAGAAAGAAAGAGAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	.	1/1:0,4:4:58,11,0	0/0:0,0:3:0,0,0
-chr21	36524115	chr21:36524115:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,33:38:255,55,0	1/1:0,40:40:255,117,0	0/1:18,31:51:255,0,198
-chr21	36532398	chr21:36532398:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,48,0:49:255,126,0,255,144,255	1/1:1,28,0:29:255,67,0,255,84,255	1/2:1,30,18:49:255,255,255,255,0,255
-chr21	36535390	chr21:36535390:M	AAATAAATACATAAATAAATAAAAGTAAAAAATAAA	<8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,28:28:255,83,0	1/1:0,28:29:255,82,0	0/1:11,18:31:240,0,114
-chr21	36537630	chr21:36537630:M	TTTTTTCTTTGTTTTTCTTTTCTTTTCTTTTTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:172,18,0	1/1:0,1:2:29,3,0	0/0:19,0:19:0,57,255
-chr21	36537990	chr21:36537990:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,17,10:39:255,184,150,255,0,255	1/2:0,21,6:35:255,145,54,255,0,255	0/1:17,16,0:35:255,0,255,255,255,255
-chr21	36539312	chr21:36539312:M	GAGTGAGTGCGTGTGGAGTGTGTGTGGAGTGAGTGTGTGTGGAGTGAGTGTATGTGCGGAGTGAGTGTGTGTGGAGTGAGTG	<2.2>	.	.	Motif=GAGT	GT:AD:DP:PL	1/1:1,18:19:255,32,0	1/1:0,18:22:255,54,0	1/1:1,14:19:255,20,0
-chr21	36552674	chr21:36552674:M	AAAACAAGACAAAAACAAAACAAAACAAAACAAAACAAAA	<7>	.	.	Motif=AAAAC	GT:AD:DP:PL	1/1:0,35:35:255,104,0	1/1:0,24:24:255,71,0	1/1:0,48:48:255,142,0
-chr21	36555807	chr21:36555807:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<17.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,4:23:255,98,34,155,0,90	1/1:0,15,5:24:255,71,0,212,9,145	1/2:0,13,7:25:255,131,60,149,0,75
-chr21	36555851	chr21:36555851:M	GAGAGAGAGAGAG	<8.5>,<9.5>	.	.	Motif=GA	GT:AD:DP:PL	2/2:0,0,4:5:137,82,69,15,14,0	2/2:0,0,5:7:183,111,93,21,20,0	1/2:0,6,1:8:178,26,3,84,0,62
-chr21	36555863	chr21:36555863:M	GTGTGTGTGTGTGTG	<6.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,16:21:130,0,1	0/1:8,15:23:109,0,29	0/1:16,17:34:116,0,93
-chr21	36559173	chr21:36559173:M	TTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<5.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	1/1:0,24:25:255,74,0	1/1:0,35:35:255,105,0	1/1:0,31:31:255,93,0
-chr21	36560224	chr21:36560224:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	1/1:2,42:45:255,97,0	1/1:2,43:48:255,104,0
-chr21	36562698	chr21:36562698:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:43:255,126,0	1/1:0,40:43:255,122,0	1/1:0,43:48:255,135,0
-chr21	36565422	chr21:36565422:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:22:255,66,0	1/1:0,33:37:255,104,0	1/1:0,43:47:255,132,0
-chr21	36569416	chr21:36569416:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:34:0,95,255	0/0:31,0:31:0,93,255	0/1:15,7:23:123,0,255
-chr21	36573301	chr21:36573301:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,10:14:255,11,0	1/1:1,11:18:255,14,0	0/1:9,3:12:48,0,222
-chr21	36577422	chr21:36577422:M	AAAAAAAAAAAAGAAAAGAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,24:27:255,42,0	1/1:1,26:27:255,62,0	1/1:0,27:27:255,79,0
-chr21	36585863	chr21:36585863:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT	<11.2>,<13.2>	.	.	Motif=TTCC	GT:AD:DP:PL	0/1:9,11,0:23:233,0,171,236,112,255	0/1:3,8,0:11:180,0,45,171,37,188	0/2:3,0,5:10:48,54,160,0,27,13
-chr21	36595125	chr21:36595125:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:4:84,11,0	1/1:0,4:6:142,18,0	0/1:1,1:4:29,0,30
-chr21	36597906	chr21:36597906:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	1/1:0,7:9:141,26,0	0/1:4,6:12:80,0,47
-chr21	36598426	chr21:36598426:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,3:35:0,45,255	0/1:17,14:31:154,0,207	0/0:25,0:25:0,74,255
-chr21	36601775	chr21:36601775:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,1,42:44:255,255,255,111,111,0	2/2:0,1,30:31:255,255,255,91,73,0	1/2:0,21,22:43:255,255,255,255,0,255
-chr21	36603712	chr21:36603712:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:39,0:41:0,122,255	0/0:26,0:26:0,78,255	0/1:17,9:28:179,0,255
-chr21	36612458	chr21:36612458:M	TTATATTATATTATATTATATTATATTAT	<7.8>,<10.8>	.	.	Motif=TTATA	GT:AD:DP:PL	1/2:0,5,3:8:223,85,69,139,0,132	1/1:0,2,0:4:86,12,0,86,11,86	2/2:0,0,5:5:156,156,156,15,15,0
-chr21	36615947	chr21:36615947:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:30:255,78,0	1/1:0,31:31:255,91,0	1/1:0,50:50:255,147,0
-chr21	36623256	chr21:36623256:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:22:255,65,0	1/1:1,25:29:255,64,0	1/1:0,29:30:255,88,0
-chr21	36629951	chr21:36629951:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:62,0,89	0/1:4,3:8:48,0,72	0/0:11,0:16:0,41,255
-chr21	36629976	chr21:36629976:M	AAAGAAAGAAAGAAAG	<2.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:13,2:15:4,0,255	0/1:15,5:20:59,0,255	0/1:28,4:32:1,0,255
-chr21	36630329	chr21:36630329:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:7:22,0,45	0/1:5,5:11:46,0,58	0/0:12,2:16:0,11,168
-chr21	36634376	chr21:36634376:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:8:131,8,0	1/1:0,2:3:54,6,0	0/0:3,0:6:0,12,97
-chr21	36635067	chr21:36635067:M	TTTTTGTTTTATTTTAGTTTTTGTTTT	<3>	.	.	Motif=TTTTAG	GT:AD:DP:PL	0/1:9,12:23:255,0,155	0/1:14,6:21:104,0,255	0/0:25,1:27:0,49,255
-chr21	36638487	chr21:36638487:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:73,9,0	1/1:0,4:6:127,15,0	0/1:1,2:7:73,0,14
-chr21	36640229	chr21:36640229:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,11:21:255,205,147,160,0,127	1/2:2,18,20:40:255,255,241,234,0,226	0/1:28,18,0:46:197,0,255,255,255,255
-chr21	36644630	chr21:36644630:M	ATATATATATATGTGTATATATATATGTATATGTATGTATATATATGTGTATATAT	<29>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,6:16:96,23,0	1/1:0,6:9:79,18,0	0/0:9,1:13:0,12,95
-chr21	36644685	chr21:36644685:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:19,0,9:29:190,143,255,0,255,255	0/1:8,15,0:24:255,0,158,224,204,255	0/2:22,0,16:38:255,233,255,0,255,255
-chr21	36645694	chr21:36645694:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<11.5>,<14.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,5,15:20:255,255,255,137,0,93	1/2:0,3,4:8:145,77,110,80,0,65	0/1:13,2,1:16:13,0,255,37,209,225
-chr21	36645755	chr21:36645755:M	TATATATATATATATATA	<10>,<11>	.	.	Motif=TA	GT:AD:DP:PL	2/2:0,0,9:14:207,138,111,35,30,0	2/2:0,0,8:13:144,93,78,14,18,0	1/1:3,14,3:21:139,25,0,87,16,122
-chr21	36645772	chr21:36645772:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<12.5>,<15.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,13,10:24:255,115,197,255,0,255	1/2:0,6,9:18:255,110,198,165,0,135	0/1:9,9,6:28:206,0,255,160,20,216
-chr21	36649303	chr21:36649303:M	TTTTTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,6:14:255,118,151,173,0,152	1/2:0,1,4:6:95,69,101,36,0,24	0/2:3,0,5:9:77,99,228,0,54,28
-chr21	36650763	chr21:36650763:M	AAAAAAAAAAGAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,14:36:162,0,255	0/1:17,11:29:118,0,213	0/0:30,0:30:0,88,255
-chr21	36651873	chr21:36651873:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<13.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:15,13:30:166,0,202	0/1:20,6:26:35,0,255	0/1:18,5:24:24,0,255
-chr21	36656169	chr21:36656169:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,23:46:255,0,255	0/1:24,20:44:227,0,255	0/0:35,0:35:0,103,255
-chr21	36657147	chr21:36657147:M	AAAAAAAAAAAAAAAA	<17>,<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,4,2:9:171,90,69,46,0,28,89,25,18,97	2/3:0,1,10,2:14:255,214,183,41,26,5,170,126,0,143	0/3:8,0,0,9:18:214,235,255,157,255,255,0,149,221,198
-chr21	36657951	chr21:36657951:M	AAAAAAAAAAAAAAAACAAAA	<22>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,10,5:16:255,80,46,143,0,137	1/2:0,3,5:8:167,84,62,43,0,28	0/2:5,1,5:11:110,71,129,0,72,113
-chr21	36658195	chr21:36658195:M	TTTATTTATTTTTTATATATTTATATATTTATAAATATTTTTATTTATTTATT	<14>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:5,5:10:78,0,75	1/1:0,1:1:22,3,0	1/1:0,1:3:22,3,0
-chr21	36659451	chr21:36659451:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,9:16:113,0,61	1/1:1,14:17:236,33,0	0/1:14,3:17:1,0,190
-chr21	36661240	chr21:36661240:M	GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	<7.8>	.	.	Motif=GGAA	GT:AD:DP:PL	1/1:0,11:12:160,34,0	1/1:0,15:15:199,42,0	0/1:5,5:10:39,0,39
-chr21	36661504	chr21:36661504:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:8:131,41,26,66,0,48	1/1:0,6,1:7:160,18,0,98,5,79	0/2:4,0,4:8:41,53,150,0,64,41
-chr21	36661524	chr21:36661524:M	AAGAAGAAGAAGAAAAAGAAAAGAA	<10.3>	.	.	Motif=AAG	GT:AD:DP:PL	0/0:9,0:10:0,27,218	0/0:15,0:15:0,45,255	0/1:7,5:16:70,0,189
-chr21	36664510	chr21:36664510:M	ACACACACACACACACACACACACACACACACACACACACACA	<20.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,11,0:16:152,35,0,187,38,255	1/1:0,13,0:22:188,44,0,233,48,255	1/2:2,5,6:14:145,108,135,47,0,148
-chr21	36664552	chr21:36664552:M	AGAGAGAGAAAGAGCGAGAGAGA	<13.5>,<16.5>,<18.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:0,0,9,18:27:255,255,255,255,255,255,209,209,0,140	2/3:0,0,8,5:13:255,255,255,115,115,81,183,183,0,154	1/3:0,10,1,15:27:255,255,255,255,255,255,229,0,231,209
-chr21	36665099	chr21:36665099:M	TCTCTCTCTCTCTCTCTCTCTCT	<9.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:11,12:30:255,0,167	0/1:6,8:19:166,0,83	0/1:11,17:37:255,0,177
-chr21	36665121	chr21:36665121:M	TTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,17:25:255,0,2	1/1:0,17:21:255,28,0	0/1:10,14:26:255,0,208
-chr21	36665702	chr21:36665702:M	ATATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13,0:23:197,35,0,226,34,255	1/1:0,6,0:9:97,22,0,111,23,138	2/2:0,2,10:18:20,39,214,2,5,0
-chr21	36665725	chr21:36665725:M	TTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,9:15:255,221,201,29,15,0	1/2:0,1,3:6:110,71,62,23,0,10	1/1:0,8,1:13:242,26,0,184,2,167
-chr21	36668367	chr21:36668367:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,1,7:21:67,109,255,0,183,188	0/2:14,1,6:22:51,94,255,0,186,191	0/1:16,13,0:30:157,0,200,240,241,255
-chr21	36672834	chr21:36672834:M	ACACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/0:31,1:33:0,79,255	0/1:15,10:25:88,0,169	0/0:23,0:24:0,70,255
-chr21	36673359	chr21:36673359:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,17:30:235,0,132	0/0:25,2:30:0,49,255	0/0:24,2:27:0,33,255
-chr21	36675129	chr21:36675129:M	TTTTTTTTTCTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,32:33:255,97,0	1/1:0,33:33:255,97,0
-chr21	36690462	chr21:36690462:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,5:8:62,0,21	0/1:4,7:12:80,0,42	0/1:1,7:10:92,0,0
-chr21	36700284	chr21:36700284:M	TTTCTCTCTTTCTTTCCTTTCTTTCTTTCTTTCTCTTTCTTTTTCTTTCTTTCTTCCTCTTTCTTTCATTCT	<18.2>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,11:11:131,30,0	1/1:0,6:6:71,16,0	1/1:0,10:10:119,27,0
-chr21	36702943	chr21:36702943:M	AAAAAAAAAAAAA	<14>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,11,0:26:123,0,188,197,255,255	1/2:0,6,5:11:213,128,110,102,0,147	0/0:27,0,0:28:0,82,255,84,255,255
-chr21	36716861	chr21:36716861:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,11:30:118,0,255	0/1:15,8:25:77,0,202	0/0:36,0:37:0,108,255
-chr21	36719947	chr21:36719947:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,14:29:180,0,198	0/1:16,18:34:222,0,186	0/0:39,0:39:0,115,255
-chr21	36733561	chr21:36733561:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:19:99,0,107	0/1:10,13:24:153,0,111	0/0:24,1:29:0,66,255
-chr21	36736712	chr21:36736712:M	CTTCCTTCCCTTCCTTCCCTCCTTCCCTTCC	<9>	.	.	Motif=CTTC	GT:AD:DP:PL	0/0:29,0:30:0,82,255	0/1:12,11:27:73,0,115	0/0:22,0:24:0,65,255
-chr21	36739982	chr21:36739982:M	AGAAAGAAGAGAAGAAAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA	<15.8>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:4,2:6:39,0,95	1/1:0,5:6:128,4,0	0/0:9,0:9:0,27,255
-chr21	36744312	chr21:36744312:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,9:16:112,0,76	0/0:9,0:11:0,29,161	0/1:12,4:16:22,0,161
-chr21	36758984	chr21:36758984:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:25:0,55,255	0/1:18,8:26:64,0,240	0/0:37,1:39:0,96,255
-chr21	36760610	chr21:36760610:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:18,0:20:0,58,255	0/0:15,1:19:0,33,250	0/1:12,9:22:94,0,156
-chr21	36771997	chr21:36771997:M	AAAAAAAAAAAACAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,1:33:0,79,255	0/1:19,11:31:109,0,237	0/0:31,0:32:0,94,255
-chr21	36772639	chr21:36772639:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,3:6:46,0,18	1/1:0,1:2:28,6,0	0/0:9,1:11:0,15,147
-chr21	36772980	chr21:36772980:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,1,4:13:34,53,201,0,103,117	1/2:1,4,2:7:68,19,38,53,0,96	0/0:8,1,0:9:0,9,123,26,126,153
-chr21	36781260	chr21:36781260:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10,0:20:133,0,103,187,136,255	1/1:2,11,0:18:199,15,0,237,45,255	0/2:11,1,11:23:125,172,255,0,144,137
-chr21	36783796	chr21:36783796:M	TGCACATGCACACACACACATGCACATACACA	<5.7>	.	.	Motif=TGCACA	GT:AD:DP:PL	0/1:9,16:34:63,0,10	0/1:11,14:35:48,0,25	0/0:29,0:39:0,67,218
-chr21	36784312	chr21:36784312:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,0:14:0,25,255	0/1:12,13:28:255,0,255	0/0:12,1:18:0,4,255
-chr21	36786284	chr21:36786284:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,25:48:255,0,250	0/1:15,23:40:255,0,157	0/0:37,2:40:0,81,255
-chr21	36796869	chr21:36796869:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:24,0:24:0,71,255	0/0:18,2:22:0,28,255	0/1:12,13:27:178,0,142
-chr21	36801783	chr21:36801783:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,1,0:51:0,119,255,148,255,255	0/1:18,16,0:35:193,0,215,255,255,255	0/2:30,1,19:52:218,255,255,0,255,255
-chr21	36803755	chr21:36803755:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,40:42:255,103,0	1/1:1,39:42:255,105,0	1/1:1,36:38:255,94,0
-chr21	36808047	chr21:36808047:M	AAAATAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,29:30:255,70,0	1/1:0,33:35:255,102,0	1/1:1,38:40:255,99,0
-chr21	36816396	chr21:36816396:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:39:218,0,255	0/0:38,2:43:0,82,255	1/1:5,32:40:255,26,0
-chr21	36823611	chr21:36823611:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<25>	.	.	Motif=GT	GT:AD:DP:PL	0/2:4,0,3:11:87,78,181,0,105,96	0/0:22,0,0:26:0,77,255,77,255,255	1/2:0,4,8:15:255,209,188,118,0,89
-chr21	36827574	chr21:36827574:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:24:184,0,93	0/0:23,1:25:0,56,255	1/1:1,14:16:239,29,0
-chr21	36827798	chr21:36827798:M	TTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,11:20:144,0,106	0/0:12,1:13:0,21,192	1/1:0,10:11:170,23,0
-chr21	36828367	chr21:36828367:M	GAATGAATGAATGAATGAATGAATGAATGAATGAATGAGTGAATAAATG	<11.2>,<14.2>	.	.	Motif=GAAT	GT:AD:DP:PL	0/2:18,0,7:25:127,181,255,0,255,255	0/1:11,11,0:22:136,0,136,199,198,255	0/2:8,0,6:14:132,157,255,0,148,188
-chr21	36830822	chr21:36830822:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:5,0,11	1/1:0,3:6:57,5,0	.
-chr21	36833594	chr21:36833594:M	TATATATATATATATATATAT	<12>,<14>	.	.	Motif=TA	GT:AD:DP:PL	0/0:18,0,1:20:0,56,255,31,255,255	0/0:14,0,0:14:0,42,255,42,255,255	1/2:0,8,7:16:255,178,149,195,0,196
-chr21	36838299	chr21:36838299:M	CACACACACACACACACACACACACACACAC	<17.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:17,0:19:0,56,255	0/0:30,0:30:0,90,255	0/1:19,13:37:253,0,255
-chr21	36838704	chr21:36838704:M	AAAAGAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,16:27:205,0,93	0/0:27,2:29:0,52,255	1/1:1,23:28:255,52,0
-chr21	36848272	chr21:36848272:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,7:18:76,0,143	0/0:15,2:21:0,26,255	1/1:2,16:19:255,20,0
-chr21	36855369	chr21:36855369:M	AAAAATAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:24,2:27:0,43,255	0/1:18,10:28:101,0,248
-chr21	36855537	chr21:36855537:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:14:255,42,0	0/0:2,0:2:0,6,54	1/1:1,16:17:255,24,0
-chr21	36862946	chr21:36862946:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:29:0,83,255	0/0:26,0:29:0,81,255	0/1:13,8:24:154,0,255
-chr21	36866207	chr21:36866207:M	GGGAAGGGAATGGTAAGGGAAGGG	<5>	.	.	Motif=GGGAA	GT:AD:DP:PL	1/1:0,31:31:255,86,0	1/1:0,28:28:255,77,0	1/1:0,48:48:255,133,0
-chr21	36866841	chr21:36866841:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,19:33:248,0,149	0/0:26,1:31:0,60,255	0/1:22,17:43:176,0,255
-chr21	36869098	chr21:36869098:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:9,9:19:127,0,118	0/0:8,0:8:0,24,145	1/1:0,15:15:255,44,0
-chr21	36874405	chr21:36874405:M	AAAATAAAATAAAATAAAATAAAATAAAATAAATAAATTAAAA	<8.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:14,1:15:0,23,255	0/0:18,0:18:0,54,255	1/1:0,8:8:169,24,0
-chr21	36879916	chr21:36879916:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,9:23:111,0,167	0/0:17,2:24:0,34,255	0/1:17,14:32:172,0,215
-chr21	36880955	chr21:36880955:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<7.8>,<9.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:6,14,0:20:215,0,58,255,100,255	0/2:11,0,10:21:121,180,255,0,170,140	0/1:11,18,0:29:255,0,123,255,178,255
-chr21	36886433	chr21:36886433:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	0/1:1,2:4:25,0,7	0/1:1,0:2:6,0,11
-chr21	36887130	chr21:36887130:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:19:135,0,90	1/1:0,18:20:255,58,0	0/1:6,13:22:174,0,63
-chr21	36888433	chr21:36888433:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:0,6,0:8:51,0,0,57,21,85	0/1:2,4,0:6:31,0,7,37,24,77	1/2:0,1,3:4:70,36,25,10,0,1
-chr21	36888446	chr21:36888446:M	ATATATATATATATATATATATATATATATATATATATATATATATATATAT	<17>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,4:9:124,0,8	1/1:0,1:3:44,7,0	0/0:0,0:1:0,1,3
-chr21	36888495	chr21:36888495:M	TATTTATTTATTTATTT	<6.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:2,6:8:141,0,32	.	0/1:3,0:5:9,0,70
-chr21	36894847	chr21:36894847:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,20:49:229,0,255	0/0:29,0:31:0,90,255	1/1:3,34:39:255,59,0
-chr21	36906050	chr21:36906050:M	AAAAAAAAAAAAAAACAAAACAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:15:0,42,255	0/0:16,0:19:0,51,255	0/1:2,5:8:117,0,28
-chr21	36906678	chr21:36906678:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:4,13,10:28:255,116,215,177,0,255	0/2:7,2,11:20:130,152,255,0,67,82	1/1:1,23,0:24:255,53,0,255,69,255
-chr21	36908392	chr21:36908392:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:33:105,0,255	0/0:29,0:31:0,90,255	1/1:1,21:24:255,52,0
-chr21	36910547	chr21:36910547:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:27:252,0,255	0/0:31,0:31:0,93,255	1/1:0,25:29:255,78,0
-chr21	36911749	chr21:36911749:M	AAAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:53,6,0	0/1:0,0:1:0,0,0	1/1:0,4:4:111,12,0
-chr21	36912072	chr21:36912072:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,4:12:36,0,107	0/0:14,2:17:0,14,205	0/1:13,6:20:46,0,179
-chr21	36917951	chr21:36917951:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,16:33:203,0,183	0/0:30,1:34:0,82,255	1/1:2,26:30:255,51,0
-chr21	36926742	chr21:36926742:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:71,0,0	0/1:2,8:11:115,0,2	0/1:6,1:9:2,0,89
-chr21	36931284	chr21:36931284:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:8:241,24,0	1/1:0,5:6:150,15,0	1/1:0,1:2:45,6,0
-chr21	36933552	chr21:36933552:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,6,2:10:169,13,16,97,0,90	2/2:0,0,4:4:68,68,68,12,12,0	1/2:0,6,6:13:246,88,67,111,0,77
-chr21	36942399	chr21:36942399:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:69,9,0	1/1:0,11:12:255,36,0	1/1:0,6:8:193,23,0
-chr21	36943818	chr21:36943818:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:139,0,109	1/1:2,15:21:255,25,0	0/1:10,12:23:154,0,117
-chr21	36948292	chr21:36948292:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,6:9:83,0,20	0/1:4,11:17:161,0,20	0/1:8,5:16:53,0,114
-chr21	36950180	chr21:36950180:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,29:54:255,0,255	1/1:0,45:45:255,132,0	0/1:21,20:41:252,0,255
-chr21	36950638	chr21:36950638:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,15:26:211,0,133	1/1:0,26:26:255,76,0	0/1:18,21:39:255,0,221
-chr21	36954744	chr21:36954744:M	AAAAAAACAAAACAAAACAAAACAAAACAAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,10:32:98,0,255	1/1:0,26:26:255,77,0	0/1:13,17:30:230,0,156
-chr21	36957053	chr21:36957053:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:15:160,0,70	1/1:0,20:25:255,63,0	0/1:4,6:13:138,0,73
-chr21	36958254	chr21:36958254:M	AAAGAAAGAAAGAAAGAAAGAAA	<6.8>,<8.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/2:13,0,8:26:255,255,255,0,210,255	1/2:0,6,8:30:255,255,255,67,0,162	0/1:13,8,0:24:74,0,167,144,236,255
-chr21	36960132	chr21:36960132:M	CCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,5:5:141,15,0	1/1:0,13:13:255,39,0	1/1:0,7:7:192,21,0
-chr21	36965732	chr21:36965732:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/1:17,10:27:99,0,223	0/0:29,1:32:0,73,255
-chr21	36965919	chr21:36965919:M	TGTTTTTTTTGTTTTGTTTT	<5>	.	.	Motif=TGTTT	GT:AD:DP:PL	0/1:16,8:24:83,0,237	1/1:0,23:23:255,68,0	0/1:11,20:31:255,0,115
-chr21	36969582	chr21:36969582:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,22:31:255,0,82	1/1:0,22:25:255,71,0	0/1:11,21:37:255,0,210
-chr21	36970994	chr21:36970994:M	AAAAAAAAAAAAAGAAAGAAAAGAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,14:32:255,0,255	1/1:0,18:19:255,54,0	0/1:11,8:20:153,0,240
-chr21	36973055	chr21:36973055:M	AAAAAAAAACAAAACA	<3.6>	.	.	Motif=AAAAC	GT:AD:DP:PL	0/1:19,23:42:255,0,255	1/1:0,27:28:255,84,0	0/1:24,14:41:255,0,255
-chr21	36983837	chr21:36983837:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:84,15,0	1/1:0,2:2:32,6,0	0/1:1,2:4:32,0,5
-chr21	36985770	chr21:36985770:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,5:22:50,0,177	0/0:31,3:37:0,56,255	0/1:23,9:35:78,0,255
-chr21	36989010	chr21:36989010:M	TTTTAATTTTATTTTATTTTATTTATTTATTTATTTATTTTTTTT	<8.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:9,7:16:109,0,155	0/1:5,10:15:179,0,68	0/1:13,13:27:214,0,212
-chr21	36992242	chr21:36992242:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,19:29:255,0,102	0/1:18,19:37:229,0,211	0/1:15,21:36:255,0,170
-chr21	36993289	chr21:36993289:M	AAACAAACAAACAAACAAA	<5.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:22,19:41:247,0,255	0/1:12,11:23:132,0,151	0/1:23,21:44:255,0,255
-chr21	36995250	chr21:36995250:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:43:255,126,0	1/1:0,49:49:255,147,0	1/1:0,49:49:255,147,0
-chr21	36996415	chr21:36996415:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,18:27:253,0,66	0/1:12,13:25:150,0,133	0/1:12,16:28:200,0,130
-chr21	36996511	chr21:36996511:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTTTT	<40>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:19:189,0,220	0/1:10,8:18:166,0,221	0/1:21,13:34:255,0,255
-chr21	36998164	chr21:36998164:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,17:34:212,0,202	0/1:7,11:18:138,0,69	0/1:11,23:35:255,0,104
-chr21	37002773	chr21:37002773:M	TTTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,4:9:46,0,64	0/1:5,4:11:48,0,65	0/1:4,7:12:92,0,38
-chr21	37004922	chr21:37004922:M	TTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:6:30,0,69	0/1:5,9:18:237,0,103	0/1:2,3:7:79,0,43
-chr21	37005243	chr21:37005243:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	1/1:2,19:24:255,35,0	0/1:3,10:13:137,0,15
-chr21	37008757	chr21:37008757:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:81,3,0	1/1:0,7:9:140,26,0	1/1:0,10:10:173,29,0
-chr21	37009235	chr21:37009235:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,28:55:255,0,255	0/1:23,22:46:255,0,255	0/1:17,27:44:255,0,183
-chr21	37010993	chr21:37010993:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,13:30:255,225,255,255,0,255	1/2:0,15,11:26:255,192,234,255,0,255	1/2:1,13,16:32:255,255,255,229,0,255
-chr21	37012213	chr21:37012213:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATT	<12.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	0/2:5,0,10:15:146,187,255,0,81,51	0/2:4,0,6:10:78,106,213,0,60,42	1/2:0,13,2:15:233,36,13,237,0,255
-chr21	37012864	chr21:37012864:M	TTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,8:10:204,0,12	1/1:0,4:5:127,15,0	1/1:0,7:9:201,15,0
-chr21	37015876	chr21:37015876:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:12,0:14:0,30,207	0/1:14,7:22:55,0,183	0/1:8,8:17:90,0,100
-chr21	37017153	chr21:37017153:M	AAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,6:15:243,95,73,87,0,90	1/2:2,4,3:10:101,25,33,23,0,62	1/2:0,5,3:9:135,44,28,65,0,64
-chr21	37019265	chr21:37019265:M	AAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:24:255,0,67	1/1:0,10:16:255,31,0	1/1:0,17:23:255,28,0
-chr21	37022163	chr21:37022163:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:62,0,70	0/1:5,0:7:3,0,63	0/1:5,2:7:14,0,65
-chr21	37026043	chr21:37026043:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,15:25:220,0,97	0/1:11,17:29:227,0,112	0/1:16,20:36:255,0,190
-chr21	37026491	chr21:37026491:M	GAGAGAGAGAGAGA	<6>	.	.	Motif=GA	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,43:44:255,129,0	1/1:0,58:58:255,171,0
-chr21	37039780	chr21:37039780:M	CCTTCCCTTTCCCTTCCCTCTCCTTTCCTCTCCTTTCCTCTCTTTTCCTCTCCTTTCCTTTCCTTTCCT	<5.4>	.	.	Motif=CCTTT	GT:AD:DP:PL	0/1:2,2:4:60,0,37	0/1:1,3:4:105,0,12	0/1:1,2:3:57,0,16
-chr21	37042969	chr21:37042969:M	TATTTATTTATTTATTTATTTATTTATTT	<5.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	0/1:10,11:21:239,0,214	1/1:0,34:34:255,102,0
-chr21	37043739	chr21:37043739:M	AAAAAAAAAAAAAAAAAAAAAA	<20>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,0,1:11:0,30,255,15,187,157	0/2:9,0,5:15:42,69,255,0,148,109	0/1:4,5,2:12:124,0,84,64,39,101
-chr21	37044386	chr21:37044386:M	CCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	1/2:0,4,3:7:137,53,34,61,0,52	0/2:3,0,2:5:41,33,71,0,51,72	1/2:0,7,4:11:208,70,39,104,0,92
-chr21	37045161	chr21:37045161:M	TTTTTTTTTGTTGTTTGTTTTTG	<3.3>	.	.	Motif=TTTTGT	GT:AD:DP:PL	1/1:0,47:47:255,141,0	0/1:17,19:36:255,0,255	1/1:0,34:34:255,102,0
-chr21	37045634	chr21:37045634:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,46:51:255,93,0	0/1:18,23:42:255,0,206	1/1:0,33:33:255,97,0
-chr21	37051655	chr21:37051655:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAAAGAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:7,5:12:50,0,84	1/1:1,11:12:174,18,0
-chr21	37052860	chr21:37052860:M	TATATATATAT	<4.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,6:6:107,18,0	0/0:29,1:30:0,71,255	1/1:0,3:3:53,9,0
-chr21	37052870	chr21:37052870:M	TGTGTGTGTATGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,37:45:255,133,0	0/1:25,15:44:255,0,255	1/1:0,27:31:255,92,0
-chr21	37054515	chr21:37054515:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:28:255,81,0	0/1:11,7:19:75,0,134	0/1:7,11:19:140,0,78
-chr21	37056958	chr21:37056958:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:25:255,69,0	0/1:11,10:24:226,0,230	1/1:0,27:30:255,89,0
-chr21	37061892	chr21:37061892:M	AAAAAAAAAAAAAATAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,21,10:32:255,172,255,255,0,255	1/1:0,28,0:29:255,85,0,255,87,255	2/2:1,0,21:22:255,255,255,47,63,0
-chr21	37066972	chr21:37066972:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<17>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,28,26:57:255,255,255,255,0,255	2/2:0,0,19:22:255,255,255,63,63,0	1/1:0,32,0:32:255,96,0,255,96,255
-chr21	37068011	chr21:37068011:M	TTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:1,31:33:255,79,0	1/1:0,40:41:255,120,0
-chr21	37068208	chr21:37068208:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,21:30:255,0,71	1/1:1,32:35:255,84,0	0/0:52,0:52:0,153,255
-chr21	37073316	chr21:37073316:M	GCTGCTGCTGCTGCTGC	<7.7>	.	.	Motif=GCT	GT:AD:DP:PL	1/1:0,21:25:255,63,0	1/1:1,31:35:255,71,0	1/1:0,38:40:255,114,0
-chr21	37075167	chr21:37075167:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:21:255,43,0	0/1:4,10:14:133,0,29	1/1:1,18:19:255,38,0
-chr21	37076695	chr21:37076695:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:11:255,33,0	1/1:0,9:14:255,36,0	0/0:0,0:1:0,0,0
-chr21	37080369	chr21:37080369:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,31:52:255,0,255	1/1:0,38:38:255,114,0	0/0:46,1:54:0,113,255
-chr21	37081866	chr21:37081866:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:27:255,0,250	0/0:28,0:35:0,93,255	1/1:0,14:15:255,42,0
-chr21	37084992	chr21:37084992:M	CAAACAAACAAACAAACAAAC	<7.2>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:9,14:24:255,0,175	1/1:0,28:29:255,84,0	0/0:35,0:35:0,105,255
-chr21	37089985	chr21:37089985:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,18:40:216,0,255	1/1:1,22:24:255,52,0	0/0:35,1:37:0,90,255
-chr21	37090468	chr21:37090468:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,26:49:255,0,255	0/0:26,2:31:0,35,255	1/1:0,44:46:255,135,0
-chr21	37091565	chr21:37091565:M	TTTATTATTTATTTATTTATTTATTTATTTATTT	<7.5>,<10.5>,<11.5>	.	.	Motif=TTTA	GT:AD:DP:PL	1/2:0,18,10,0:32:255,255,237,255,0,255,255,207,255,255	2/3:0,0,3,4:8:203,205,207,73,73,50,62,63,0,42	1/1:0,29,0,0:31:255,89,0,255,90,255,255,90,255,255
-chr21	37093380	chr21:37093380:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:10:73,0,39	0/0:4,0:5:0,14,77	0/1:1,4:5:53,0,2
-chr21	37095138	chr21:37095138:M	TGTGTGTGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,5:24:84,0,255	1/1:0,14:17:255,47,0	0/0:28,0:29:0,87,255
-chr21	37101352	chr21:37101352:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<16.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,13,0:28:255,0,255,255,255,255	0/1:12,16,2:32:255,0,255,255,171,255	0/2:8,0,16:24:216,255,255,0,142,73
-chr21	37101919	chr21:37101919:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,12:36:253,0,255	1/1:0,2:2:60,6,0	0/0:37,0:37:0,111,255
-chr21	37104589	chr21:37104589:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,1:5:111,17,14,99,0,98	1/1:0,3,0:3:81,9,0,82,9,84	0/2:1,0,3:4:38,49,99,0,17,5
-chr21	37107077	chr21:37107077:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,17:39:201,0,255	1/1:0,31:34:255,96,0	0/0:23,2:26:0,40,255
-chr21	37115175	chr21:37115175:M	ATAATAATAATAATAATAATAATAATAA	<10.3>,<11.3>,<12.3>	.	.	Motif=ATA	GT:AD:DP:PL	1/3:0,17,0,8:25:255,218,165,255,150,255,255,0,255,255	3/3:0,0,1,11:12:255,255,255,215,214,181,36,33,17,0	1/2:0,12,11,0:23:255,204,138,190,0,157,255,174,222,255
-chr21	37118116	chr21:37118116:M	TTTTTCTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,49:50:255,147,0	1/1:0,37:37:255,109,0	1/1:0,55:55:255,162,0
-chr21	37122405	chr21:37122405:M	ATATATATATATATAATATATATATATATATATTATATATATATATATA	<7.5>,<13>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,3,17:20:255,255,255,76,0,25	2/2:0,0,10:10:255,255,255,30,30,0	1/1:0,5,0:5:140,15,0,140,15,140
-chr21	37122954	chr21:37122954:M	TGTGTGTGTGTGTGTG	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,108,0	1/1:0,38:39:255,115,0	1/1:0,37:37:255,111,0
-chr21	37126042	chr21:37126042:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:163,0,163	0/0:32,2:35:0,67,255	1/1:3,28:33:255,42,0
-chr21	37132327	chr21:37132327:M	TTTTTTTTCTTTTTTTTTTTTTT	<21>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:10,2,12:24:183,153,255,0,147,117	0/0:33,0,3:36:0,99,255,53,255,255	1/2:0,3,8:11:199,123,114,54,0,22
-chr21	37134449	chr21:37134449:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:194,0,183	0/0:37,0:39:0,114,255	1/1:0,38:38:255,112,0
-chr21	37150054	chr21:37150054:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,19:37:255,0,174	0/1:19,20:43:255,0,220	1/1:2,35:39:255,78,0
-chr21	37152380	chr21:37152380:M	TTTTTTTTTTTTGTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,6:12:74,0,74	0/0:4,0:5:0,14,80	1/1:0,19:22:255,64,0
-chr21	37156043	chr21:37156043:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,13:30:155,0,231	0/0:41,0:43:0,126,255	1/1:2,38:40:255,81,0
-chr21	37156207	chr21:37156207:M	TTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,19:33:255,0,249	0/0:38,0:40:0,119,255	1/1:0,46:46:255,138,0
-chr21	37161104	chr21:37161104:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,24:51:255,0,255	0/0:42,0:44:0,128,255	1/1:1,32:35:255,84,0
-chr21	37164341	chr21:37164341:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:20:98,0,144	0/0:26,2:29:0,50,255	1/1:3,25:32:255,38,0
-chr21	37175100	chr21:37175100:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,9:22:101,0,175	0/0:23,0:24:0,70,255	1/1:2,18:21:255,25,0
-chr21	37175264	chr21:37175264:M	AAAAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,4:6:108,76,92,0,27,12	0/0:6,0,0:6:0,18,177,18,177,177	1/2:0,3,8:11:255,133,102,51,0,18
-chr21	37184630	chr21:37184630:M	TTTTTTTTTTTTTTTTTTT	<18>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,2:6:38,49,108,0,69,101	0/1:11,6,0:18:59,0,132,109,184,255	2/2:0,0,4:4:111,111,111,12,12,0
-chr21	37190121	chr21:37190121:M	TTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	.	.	1/1:0,3:5:102,12,0
-chr21	37192492	chr21:37192492:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,4:16:255,102,65,255,0,255	0/1:11,8,0:20:176,0,255,206,255,255	2/2:0,0,11:11:255,255,255,33,33,0
-chr21	37193366	chr21:37193366:M	AAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,21:45:255,255,255,255,0,255	0/1:26,18,0:47:185,0,255,255,255,255	2/2:0,1,41:43:255,255,255,126,108,0
-chr21	37196227	chr21:37196227:M	TTTTTTCTTTCTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:14:104,0,69	0/1:10,5:15:43,0,128	1/1:2,18:20:255,23,0
-chr21	37197755	chr21:37197755:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,11:39:219,0,255	0/0:34,0:36:0,105,255	1/1:1,19:25:255,32,0
-chr21	37198851	chr21:37198851:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,29:54:255,0,255	0/0:38,2:40:0,82,255	1/1:0,49:49:255,145,0
-chr21	37204423	chr21:37204423:M	TGTGTGTGTGTGTGTGTGTGTG	<10>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,28:29:255,85,0	1/1:0,29:30:255,88,0
-chr21	37207073	chr21:37207073:M	AAAAAACAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,39:40:255,99,0	1/1:0,29:29:255,85,0	1/1:1,30:34:255,81,0
-chr21	37212896	chr21:37212896:M	AAAGAAAGAAAGAAAGGGAAAGAAAGAAAGAAGGAAAGAAGGAAAGAAAG	<7.2>,<13.5>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:10,3,2:16:46,0,255,57,83,130	0/0:27,1,0:31:0,16,255,71,255,255	1/2:0,4,8:12:154,83,191,92,0,71
-chr21	37212994	chr21:37212994:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:12:21,0,82	0/1:5,2:8:12,0,61	0/0:10,2:15:0,6,149
-chr21	37214385	chr21:37214385:M	AAAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,1:6:17,23,117,0,85,75	0/0:5,0,0:6:0,18,164,15,150,144	1/2:0,5,3:8:213,52,29,87,0,64
-chr21	37215269	chr21:37215269:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5,0:12:129,0,126,95,132,212	0/0:2,0,0:5:0,14,95,9,76,69	1/2:0,5,3:8:217,52,29,87,0,64
-chr21	37216209	chr21:37216209:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,7:20:71,0,163	0/0:15,0:16:0,46,255	1/1:2,25:30:255,51,0
-chr21	37229022	chr21:37229022:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,22:39:255,0,207	0/1:14,22:36:255,0,144	0/0:48,1:49:0,126,255
-chr21	37235011	chr21:37235011:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/1:13,15:28:184,0,149	0/0:29,0:31:0,82,255
-chr21	37235852	chr21:37235852:M	TATATATATATATATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,11:16:255,48,0	1/1:0,9:12:255,24,0	1/1:0,9:13:255,39,0
-chr21	37235880	chr21:37235880:M	TTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:26:183,0,255	1/1:0,10:13:255,37,0	0/1:17,13:32:255,0,255
-chr21	37239604	chr21:37239604:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:144,0,180	0/1:10,9:19:101,0,118	0/1:13,11:26:133,0,160
-chr21	37248335	chr21:37248335:M	GGGGGTGGGGGGAGGGGGGG	<13>	.	.	Motif=G	GT:AD:DP:PL	0/1:7,31:38:255,0,68	0/0:7,0:7:0,21,193	1/1:0,48:48:255,144,0
-chr21	37250900	chr21:37250900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,6:15:66,0,112	0/0:11,0:12:0,35,202	0/1:1,6:9:83,0,5
-chr21	37255852	chr21:37255852:M	TTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:107,14,0	0/1:5,6:15:151,0,116	.
-chr21	37261654	chr21:37261654:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:40:255,0,219	0/1:22,14:37:139,0,255	0/0:42,1:43:0,109,255
-chr21	37274998	chr21:37274998:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<10.5>,<12.5>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:7,0,6:14:79,106,255,0,104,98	0/2:7,0,3:10:26,54,190,0,107,98	0/1:8,8,0:16:106,0,104,152,128,255
-chr21	37275958	chr21:37275958:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27:27:255,80,0	0/1:20,18:38:209,0,244	1/1:0,38:38:255,112,0
-chr21	37277526	chr21:37277526:M	AAAACAAAAACAAAAACAAAAAACAAACAAACAAAAA	<7>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,29:29:255,87,0	0/1:12,12:24:251,0,251	1/1:0,29:29:255,87,0
-chr21	37278234	chr21:37278234:M	CCCCCCCCCGCCCCCCC	<18>,<20>	.	.	Motif=C	GT:AD:DP:PL	2/2:0,0,7:7:210,206,202,21,21,0	1/2:0,7,3:12:187,89,66,114,0,164	2/2:0,0,5:6:151,147,144,15,15,0
-chr21	37284569	chr21:37284569:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	<10.2>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:0,5:12:120,0,29	0/0:12,0:17:0,19,255	0/1:0,14:28:255,0,0
-chr21	37284597	chr21:37284597:M	TTTTTTTTTTTTTTTTTTTT	<21>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,1:8:56,21,20,36,0,111	0/0:1,0,0:2:0,5,23,6,29,56	1/2:1,7,3:12:159,98,87,71,0,184
-chr21	37293474	chr21:37293474:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:5:18,0,35	1/1:0,5:8:96,9,0	0/1:5,2:7:15,0,68
-chr21	37296540	chr21:37296540:M	TTTTTTTTTTTTTTT	<14>,<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,15,3,9:27:255,248,235,255,110,255,255,0,255,255	1/2:4,14,10,1:29:255,123,238,184,0,255,255,167,255,255	2/3:0,0,3,15:18:255,255,255,255,255,219,46,55,0,1
-chr21	37303361	chr21:37303361:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,1:37:0,90,255	0/1:15,10:26:100,0,188	0/0:33,0:34:0,99,255
-chr21	37308460	chr21:37308460:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,4:6:27,0,6	0/0:3,0:3:0,8,32	0/0:3,0:3:0,8,32
-chr21	37309286	chr21:37309286:M	TATTTATTTATTTATTTATTTATTTATTTATTATTT	<10>,<11>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,9,0:27:91,0,255,145,255,255	0/2:5,0,8:14:185,140,197,0,90,105	1/1:0,19,0:22:255,46,0,255,61,255
-chr21	37318424	chr21:37318424:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:5:0,15,85	0/0:5,1:6:0,1,65	0/1:1,5:10:77,0,11
-chr21	37318980	chr21:37318980:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,3,11:27:124,145,255,0,148,191	0/1:14,16,0:30:191,0,156,255,204,255	2/2:1,0,22:25:255,255,255,55,71,0
-chr21	37321432	chr21:37321432:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAA	<6.5>,<8.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:5,16,0:23:255,0,91,255,137,255	0/2:2,0,8:12:209,213,255,0,54,28	1/1:0,21,0:24:255,66,0,255,66,255
-chr21	37321983	chr21:37321983:M	GTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:5,19,12,0:36:255,143,255,255,0,255,255,236,255,255	0/1:9,17,0,0:26:224,0,81,255,132,255,255,157,255,255	2/3:2,0,13,13:28:255,255,255,199,231,154,163,236,0,185
-chr21	37325022	chr21:37325022:M	TCTCTCTCTCTCTCTCTCTCT	<12.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:9,12:25:201,0,202	0/1:1,22:28:255,0,2	0/0:31,0:34:0,95,255
-chr21	37327340	chr21:37327340:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,6:14:199,71,69,57,0,90	1/2:0,11,7:19:255,111,69,151,0,140	1/2:3,10,5:19:227,45,47,97,0,154
-chr21	37330840	chr21:37330840:M	AAAAAAAAAAAAGAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:31:164,0,127	0/1:18,12:32:98,0,188	0/1:25,14:41:101,0,255
-chr21	37331534	chr21:37331534:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,22:47:255,0,255	0/1:15,16:32:192,0,175	0/1:24,17:42:199,0,255
-chr21	37332171	chr21:37332171:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:11:217,52,59,173,0,164	1/2:0,1,1:5:74,16,14,58,0,54	1/2:0,7,2:14:255,43,31,231,0,222
-chr21	37340818	chr21:37340818:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:18:0,52,255	0/1:10,3:14:11,0,137	0/1:7,6:14:74,0,81
-chr21	37341121	chr21:37341121:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,10:33:90,0,246	0/0:24,2:28:0,49,255	0/1:9,8:17:80,0,96
-chr21	37341131	chr21:37341131:M	AAAGAAAGAAAGAAAGAAAG	<4.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:22,6:36:0,5,40	0/0:25,0:26:0,37,96	1/1:0,5:13:42,17,0
-chr21	37345516	chr21:37345516:M	AAATAAATAAATAAATAAATAAAATAAA	<6>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:17,20:37:255,0,219	0/0:40,0:40:0,118,255	1/1:0,41:41:255,121,0
-chr21	37346955	chr21:37346955:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,18:35:255,0,149	0/0:28,1:31:0,70,255	1/1:2,40:46:255,88,0
-chr21	37352837	chr21:37352837:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,12:15:212,25,0	0/1:4,5:11:61,0,45	1/1:0,7:7:120,20,0
-chr21	37360872	chr21:37360872:M	CTCTCTCTCTCTCTCTCTCT	<11>	.	.	Motif=CT	GT:AD:DP:PL	0/1:19,22:41:255,0,241	0/0:30,0:30:0,88,255	1/1:0,35:36:255,103,0
-chr21	37362853	chr21:37362853:M	AAAAAAAAAAAAAAGGAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,6:18:63,0,141	0/1:9,5:17:56,0,105	0/0:27,1:28:0,65,255
-chr21	37372278	chr21:37372278:M	AAAAAACAAAACAAAACAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:21:255,62,0	0/1:10,13:23:163,0,110	1/1:0,20:20:255,59,0
-chr21	37372449	chr21:37372449:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:19:151,0,71	0/0:22,2:25:0,29,255	1/1:2,19:21:255,27,0
-chr21	37375520	chr21:37375520:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:3:48,9,0	1/1:0,4:5:80,14,0	1/1:0,0:1:1,1,0
-chr21	37383833	chr21:37383833:M	GTGTATGTGTGTGTGTGTGTGTGTGTGT	<18>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,10:26:194,0,255	0/0:35,0:37:0,110,255	1/1:0,27:27:255,81,0
-chr21	37388101	chr21:37388101:M	TTTTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2,0:5:74,1,0,56,5,59	1/2:1,10,4:16:255,50,90,254,0,250	0/1:2,1,0:4:33,0,52,34,35,61
-chr21	37388655	chr21:37388655:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,21:35:255,0,151	0/1:16,18:34:221,0,185	0/0:29,2:31:0,55,255
-chr21	37389039	chr21:37389039:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,3:20:0,10,226	0/0:40,1:41:0,103,255	1/1:0,4:4:64,12,0
-chr21	37389914	chr21:37389914:M	TTTTGTTTTTTGTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,11:30:110,0,235	0/1:9,8:18:93,0,102	0/0:24,0:25:0,73,255
-chr21	37394227	chr21:37394227:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,20:37:255,0,207	0/0:38,2:41:0,85,255	1/1:1,40:41:255,103,0
-chr21	37396521	chr21:37396521:M	TTTTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,35:36:255,88,0	0/1:22,14:38:149,0,255	1/1:2,43:45:255,96,0
-chr21	37398077	chr21:37398077:M	ATATATATATATATTTATATTTATATATTTTTGTATATTTTATATTTATATATGTGTATATATATATAT	<33>,<34>	.	.	Motif=AT	GT:AD:DP:PL	0/1:8,6,2:17:75,0,120,54,37,71	.	0/2:10,0,6:17:5,48,236,0,77,32
-chr21	37398344	chr21:37398344:M	AAAAAAAAAAAAATAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,1:50:0,129,255	0/1:11,14:25:172,0,120	0/0:23,0:23:0,68,255
-chr21	37398905	chr21:37398905:M	TTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,8:20:173,0,211	0/1:13,11:26:226,0,255	0/0:25,0:31:0,71,255
-chr21	37401483	chr21:37401483:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,10:24:111,0,183	0/1:10,8:18:85,0,119	0/0:20,0:21:0,61,255
-chr21	37403635	chr21:37403635:M	AAAAAAAAAAAAAAA	<11>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,7,18:27:255,219,146,84,0,5	0/1:12,5,0:22:81,0,255,23,255,255	2/2:0,1,29:31:255,255,255,82,71,0
-chr21	37403664	chr21:37403664:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14.5>,<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,12:25:255,142,68,149,0,77	0/1:4,7,0:13:172,0,90,86,109,174	2/2:0,4,25:29:255,255,235,87,33,0
-chr21	37408006	chr21:37408006:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,19:43:230,0,255	0/0:45,0:45:0,132,255	1/1:1,42:43:255,109,0
-chr21	37417494	chr21:37417494:M	TTTTTTATTTTTCTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:10:228,29,0	1/1:1,8:9:181,3,0	.
-chr21	37426755	chr21:37426755:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:230,38,0	0/1:6,6:12:69,0,69	1/1:1,13:15:223,26,0
-chr21	37433045	chr21:37433045:M	ATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,17:35:233,0,189	0/0:19,1:20:0,41,255	1/1:3,21:25:255,16,0
-chr21	37440131	chr21:37440131:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,0,0	.	0/1:1,3:5:85,0,15
-chr21	37441963	chr21:37441963:M	TTTTTTTTTTTTTT	<12>,<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,21,4,1:49:255,0,255,255,255,255,255,255,255,255	2/3:0,1,15,8:26:255,255,255,148,212,177,255,244,0,255	0/0:38,0,0,1:39:0,117,255,115,255,255,97,255,255,255
-chr21	37446582	chr21:37446582:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,23:27:255,42,0	0/1:21,17:42:196,0,255	1/1:2,27:30:255,52,0
-chr21	37451346	chr21:37451346:M	CTCCGTCCCTCCATCCCTCCCTCCCTCCATCCCTCCC	<11.5>	.	.	Motif=CTCC	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/1:10,5:15:79,0,207	0/0:23,0:23:0,69,255
-chr21	37452758	chr21:37452758:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	0/1:2,4:7:91,0,38	1/1:1,15:21:255,28,0
-chr21	37454086	chr21:37454086:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,0,0	1/1:0,6:6:163,18,0	.
-chr21	37455020	chr21:37455020:M	TTTTTTTTTTTTTTTTTTT	<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,6:12:194,88,75,43,0,51	0/0:5,1,0:8:0,6,90,20,107,166	0/2:3,3,6:12:145,59,78,0,7,58
-chr21	37457014	chr21:37457014:M	TTACTTACTTACTTACTTACTTACTTA	<1.8>,<8.8>	.	.	Motif=TTAC	GT:AD:DP:PL	0/2:6,0,6:19:95,124,255,0,144,122	0/1:4,8,0:14:172,0,95,190,106,255	0/2:2,0,17:26:255,255,255,0,72,5
-chr21	37457038	chr21:37457038:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTA	<8.8>,<9.8>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:16,0,8:24:147,128,255,0,255,255	1/2:0,6,7:13:255,110,73,95,0,57	0/0:17,0,0:17:0,51,255,51,255,255
-chr21	37458269	chr21:37458269:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<22.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,16,0,0:18:255,54,0,255,54,255,255,54,255,255	1/3:0,13,0,8:22:255,222,180,255,132,255,255,0,255,255	1/2:0,14,8,0:25:255,229,183,255,0,255,255,145,255,255
-chr21	37463204	chr21:37463204:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12>,<14>,<20>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,19,22,0:42:255,255,255,255,0,255,255,255,255,255	2/3:0,0,12,9:23:255,255,255,255,255,255,207,255,0,255	1/1:0,24,0,0:24:255,72,0,255,72,255,255,72,255,255
-chr21	37467102	chr21:37467102:M	AAAAGAAAAAAAAAAAAAAACAAAACAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:26:255,58,0	1/1:0,17:17:255,50,0	1/1:0,23:24:255,70,0
-chr21	37476819	chr21:37476819:M	CCCCCCCCCCCC	<13>,<14>	.	.	Motif=C	GT:AD:DP:PL	0/0:14,1,0:15:0,26,239,42,255,255	0/2:4,4,18:26:255,250,248,0,9,45	0/1:7,4,0:13:34,0,108,60,138,246
-chr21	37484330	chr21:37484330:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,14:15:255,44,0	0/1:10,7:18:68,0,128	1/1:1,12:13:195,20,0
-chr21	37489634	chr21:37489634:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:36:255,67,0	0/1:15,11:27:231,0,255	1/1:1,30:40:255,58,0
-chr21	37494946	chr21:37494946:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,27:29:255,48,0	1/1:0,24:25:255,73,0	1/1:1,38:40:255,99,0
-chr21	37495153	chr21:37495153:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<21>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,26,0:27:255,81,0,255,81,255	1/2:0,17,8:27:255,225,170,255,0,255	1/1:0,19,0:19:255,57,0,255,57,255
-chr21	37512925	chr21:37512925:M	TTTTTTTTTTTTCTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,15,13:29:255,181,158,252,0,188	0/1:9,6,0:16:136,0,206,110,151,222	2/2:1,0,22:23:255,255,255,50,67,0
-chr21	37526664	chr21:37526664:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,22:25:255,19,0	0/1:12,3:15:8,0,163	1/1:1,16:19:255,37,0
-chr21	37529451	chr21:37529451:M	TGGATGGATGGATGGATGGA	<3>,<4>	.	.	Motif=TGGA	GT:AD:DP:PL	1/1:0,11,1:15:255,41,0,191,28,156	0/0:12,0,0:12:0,36,255,33,181,149	1/2:0,7,5:14:210,51,24,104,0,69
-chr21	37537906	chr21:37537906:M	TTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<13.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	1/1:0,10,0:11:255,32,0,225,32,199	1/2:0,8,11:19:255,166,142,142,0,88	1/1:0,12,0:13:255,39,0,255,38,233
-chr21	37545384	chr21:37545384:M	TAAATAAATAAATAAAGTAATAAATA	<5.8>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:20,16:36:255,0,255	0/1:16,17:33:255,0,255	0/0:35,0:35:0,105,255
-chr21	37545510	chr21:37545510:M	TGTGTGTGTGTGTG	<6>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,107,0	0/1:14,27:41:255,0,134	1/1:0,42:42:255,124,0
-chr21	37563876	chr21:37563876:M	CGTCCCCGTCCGCGTCCGC	<4.2>	.	.	Motif=CGTCCG	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:34,0:34:0,102,255	0/1:18,14:32:255,0,255
-chr21	37565447	chr21:37565447:M	CTTTCTTTCTTTCCTTTCTTCCTTCCTTTTTTTTTTCTTT	<6.5>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:19,7:30:136,0,255	0/1:11,5:18:83,0,255	0/1:16,3:29:71,0,255
-chr21	37565473	chr21:37565473:M	TTTTTTTTTTCTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:10:0,29,164	0/1:5,2:7:12,0,61	0/1:9,3:12:15,0,115
-chr21	37567973	chr21:37567973:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:23:135,0,154	0/0:14,0:15:0,44,254	0/1:10,9:19:106,0,124
-chr21	37572299	chr21:37572299:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:47,0,47	0/0:6,1:7:0,4,84	0/1:5,1:6:0,0,69
-chr21	37579027	chr21:37579027:M	TTTTTGTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,17:26:238,0,88	0/0:14,1:15:0,27,226	0/1:10,9:21:101,0,134
-chr21	37581954	chr21:37581954:M	AAAAAAAAACAAAAAACAAAAACAAAAA	<4.3>	.	.	Motif=AAAACA	GT:AD:DP:PL	1/1:0,29:29:255,87,0	1/1:0,44:44:255,132,0	1/1:0,38:38:255,114,0
-chr21	37585793	chr21:37585793:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:47,0:48:0,141,255	0/0:35,2:39:0,78,255	0/1:28,31:59:255,0,255
-chr21	37597085	chr21:37597085:M	TTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:32:0,76,255	0/0:33,1:38:0,73,255	0/1:13,5:20:122,0,255
-chr21	37607464	chr21:37607464:M	ATATATATATATATATATAT	<15.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,6:10:255,70,40,47,0,18	0/2:7,0,2:11:44,31,223,0,199,191	0/1:10,2,0:15:50,0,244,44,255,255
-chr21	37612725	chr21:37612725:M	AAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:22:255,65,0	0/1:2,8:16:225,0,20	0/1:6,14:26:255,0,82
-chr21	37614360	chr21:37614360:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:27,0:27:0,79,255	0/1:12,9:22:103,0,135	0/1:16,10:26:97,0,197
-chr21	37614751	chr21:37614751:M	TGTGTGTGTATGCATGTGTCTGTGTGTATGTGTGTGTGTATGCATGTGTCTGTGTGTGTATTTGTGTGTATGTGTGTGTGT	<34>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,3:9:91,0,84	0/0:3,0:4:0,9,79	0/0:6,0:6:0,18,158
-chr21	37615245	chr21:37615245:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:12:255,36,0	.	1/1:0,7:7:195,21,0
-chr21	37616591	chr21:37616591:M	ATATATATATATATATATATATATAT	<12>	.	.	Motif=AT	GT:AD:DP:PL	1/1:1,6:12:130,11,0	1/1:0,8:11:164,30,0	1/1:0,0:3:0,0,0
-chr21	37617170	chr21:37617170:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	<10.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,3:4:100,9,0	1/1:0,4:5:124,12,0	0/0:0,0:4:0,1,2
-chr21	37626131	chr21:37626131:M	TTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,13,13:29:255,193,159,160,0,181	0/2:22,2,13:38:255,194,255,0,255,255	0/1:19,18,0:39:212,0,253,255,255,255
-chr21	37630135	chr21:37630135:M	TGTGTGTGTGTGTGTGTGTGTGTGGTGT	<18>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,11,5:19:255,131,90,255,0,255	0/2:14,0,8:24:181,223,255,0,255,255	0/1:17,12,0:30:255,0,255,255,255,255
-chr21	37634762	chr21:37634762:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	0/1:10,13:26:173,0,110	0/1:16,19:37:246,0,191
-chr21	37645018	chr21:37645018:M	TTTTTTTTTTTTTTTTTT	<14>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,7:16:146,176,255,0,210,186	1/2:0,10,3:14:255,76,58,255,0,251	0/1:7,11,0:25:255,0,166,255,185,255
-chr21	37649921	chr21:37649921:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11,2:13:255,33,0,204,1,169	1/1:0,23,0:24:255,72,0,255,70,255	1/2:0,13,8:22:255,123,82,241,0,183
-chr21	37654106	chr21:37654106:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,10:16:119,0,10	0/1:3,2:9:26,0,42	0/1:6,1:9:1,0,74
-chr21	37654415	chr21:37654415:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,0:34:0,100,255	0/1:25,17:47:173,0,255	0/1:21,18:44:205,0,255
-chr21	37655180	chr21:37655180:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18>,<19>	.	.	Motif=TG	GT:AD:DP:PL	2/2:0,3,12:18:255,135,89,48,13,0	1/2:0,3,3:9:160,29,11,29,0,11	1/2:0,9,7:16:255,70,22,88,0,40
-chr21	37655225	chr21:37655225:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	<18.5>,<22.5>,<23.5>	.	.	Motif=GA	GT:AD:DP:PL	1/3:0,8,0,5:15:255,147,123,255,76,255,210,0,208,192	2/3:0,0,3,8:12:255,255,255,106,106,70,52,52,0,17	1/2:0,10,11,1:23:255,255,255,255,0,226,255,141,249,255
-chr21	37661799	chr21:37661799:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:32:255,95,0	1/1:0,29:29:255,85,0	1/1:0,42:42:255,124,0
-chr21	37663464	chr21:37663464:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,46:47:255,120,0	0/1:22,23:45:255,0,255	0/1:18,36:55:255,0,186
-chr21	37664793	chr21:37664793:M	TTTTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,2:7:189,35,14,87,0,67	0/1:2,4,1:9:106,0,47,41,36,85	1/2:1,3,8:14:237,91,105,7,0,18
-chr21	37669569	chr21:37669569:M	TGTGTGTGTTGTGTGTGTGTGTGTGTGTGTGTGTG	<16.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,10:27:255,255,233,255,0,255	0/1:9,20,0:32:255,0,66,255,159,255	0/2:12,0,11:25:252,255,255,0,220,255
-chr21	37677690	chr21:37677690:M	TCCATCCATTTATCCATTCATTCAATCCATCCATCCATCCA	<33.8>	.	.	Motif=TCCA	GT:AD:DP:PL	0/1:19,10:29:37,0,255	0/0:16,5:21:0,1,255	0/0:22,4:26:0,29,255
-chr21	37677771	chr21:37677771:M	TCCATCCATCCATCCATCCACCCACCTATCCACCCACCCATCCA	<33.8>	.	.	Motif=TCCA	GT:AD:DP:PL	1/1:0,10:10:122,28,0	1/1:0,5:5:61,14,0	1/1:0,4:4:49,11,0
-chr21	37684349	chr21:37684349:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,19:35:255,0,200	1/1:2,27:32:255,57,0	0/1:9,25:42:255,0,124
-chr21	37688121	chr21:37688121:M	TTCTTCTTCTT	<2.7>	.	.	Motif=TTC	GT:AD:DP:PL	0/1:20,19:39:253,0,255	0/1:18,24:42:255,0,203	0/0:62,0:62:0,183,255
-chr21	37690770	chr21:37690770:M	TTTTTTCTTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,2:17:0,14,236	0/1:11,10:22:117,0,125	0/1:4,8:13:114,0,33
-chr21	37698699	chr21:37698699:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,7:21:67,0,187	1/1:2,17:19:255,21,0	0/1:7,4:12:38,0,100
-chr21	37701396	chr21:37701396:M	TGTGTGTGTGTGTGTG	<9>,<10>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,21,13:34:255,249,153,255,0,255	0/2:24,0,21:47:255,255,255,0,255,255	0/1:18,15,0:34:186,0,243,243,255,255
-chr21	37702235	chr21:37702235:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,5:7:118,0,11	1/1:0,1:1:27,3,0	0/1:1,3:6:73,0,16
-chr21	37704661	chr21:37704661:M	TCATCATCATCATCATCATCATCATC	<9.7>,<10.7>	.	.	Motif=TCA	GT:AD:DP:PL	1/2:0,15,12:27:255,224,148,241,0,205	0/2:20,0,10:30:199,174,255,0,255,255	1/1:0,27,0:27:255,80,0,255,80,255
-chr21	37709147	chr21:37709147:M	AAAGGAAAGGAA	<2.6>	.	.	Motif=AAAGG	GT:AD:DP:PL	0/1:30,19:49:255,0,255	0/0:40,0:40:0,120,255	1/1:0,44:44:255,132,0
-chr21	37709515	chr21:37709515:M	AAAAAAAAGAAAAGAAAAGAAAAGAAA	<6.4>,<7.6>	.	.	Motif=AAAAG	GT:AD:DP:PL	1/1:0,13,0:13:254,39,0,255,39,255	2/2:0,0,12:12:255,255,255,36,36,0	1/1:0,31,0:31:255,92,0,255,93,255
-chr21	37716380	chr21:37716380:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:27:140,0,192	0/0:27,1:32:0,76,255	0/1:4,20:27:255,0,2
-chr21	37720693	chr21:37720693:M	TTTTCTTTTCTTTTTTTTTTTTTTTT	<24>,<25>,<27>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,2,5,3:10:144,96,119,54,45,60,112,55,0,152	1/3:1,6,0,3:10:183,35,74,138,81,164,146,0,101,156	2/2:2,1,13,0:16:211,190,241,11,29,0,252,255,42,255
-chr21	37727459	chr21:37727459:M	GTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:1,24:25:255,56,0	1/1:2,23:25:255,36,0
-chr21	37728699	chr21:37728699:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:21,16:39:255,0,255	0/0:25,0:28:0,80,255	1/1:2,39:43:255,72,0
-chr21	37731101	chr21:37731101:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTG	<17>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	2/2:0,0,21:21:255,255,255,62,63,0	1/2:0,11,6:20:255,113,123,213,0,255	2/2:0,0,32:32:255,255,255,94,96,0
-chr21	37737463	chr21:37737463:M	GTTTGTTTGTTT	<2>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:34,0:34:0,101,255	0/1:29,16:45:158,0,255	0/0:48,0:48:0,142,255
-chr21	37739914	chr21:37739914:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,29:59:255,0,255	1/1:1,35:38:255,81,0	0/1:32,26:59:255,0,255
-chr21	37745073	chr21:37745073:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<14>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16,0:17:255,48,0,255,39,255	2/2:0,0,3:4:98,98,98,12,12,0	1/1:0,13,1:15:255,42,0,255,17,255
-chr21	37764384	chr21:37764384:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:21:255,53,0	0/1:15,8:27:142,0,255	1/1:0,18:23:255,57,0
-chr21	37769413	chr21:37769413:M	TTATTATTATTATTATTATTATTATTATTATTA	<9>,<10>	.	.	Motif=TTA	GT:AD:DP:PL	1/2:0,15,19:34:255,255,255,255,0,190	0/2:3,0,6:9:82,92,170,0,54,28	1/2:0,15,16:31:255,255,210,255,0,191
-chr21	37796767	chr21:37796767:M	CTTTCTTTCTTTCTTT	<6.2>	.	.	Motif=CTTT	GT:AD:DP:PL	0/1:10,6:16:126,0,246	0/0:14,0:14:0,42,255	1/1:0,9:14:255,26,0
-chr21	37814897	chr21:37814897:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3:14:11,0,150	0/0:11,1:14:0,2,143	0/1:3,8:13:120,0,13
-chr21	37818194	chr21:37818194:M	GTGTGTGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20>,<27>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,9,4:16:255,43,91,242,0,255	2/2:2,0,17:20:255,255,255,24,60,0	1/1:0,9,0:12:255,30,0,255,30,255
-chr21	37819247	chr21:37819247:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,25:36:255,0,101	0/0:48,2:51:0,114,255	0/1:30,27:57:255,0,255
-chr21	37819800	chr21:37819800:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:26:255,68,0	1/1:0,27:32:255,94,0	0/1:13,14:30:255,0,255
-chr21	37826612	chr21:37826612:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:40:239,0,255	0/1:30,22:52:237,0,255	0/0:41,0:41:0,121,255
-chr21	37835805	chr21:37835805:M	ACCCTAACCCTAACCCTAACCCTAACCCTAACCCT	<4.8>	.	.	Motif=ACCCTA	GT:AD:DP:PL	0/1:6,19:25:255,0,42	0/0:26,0:26:0,77,255	0/1:15,17:32:226,0,188
-chr21	37837714	chr21:37837714:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,17:40:232,0,250	0/0:26,1:27:0,61,255	0/1:19,17:36:206,0,242
-chr21	37844065	chr21:37844065:M	TTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,10,0:35:182,0,255,185,255,255	0/0:33,0,0:35:0,105,255,105,255,255	1/2:0,9,10:19:255,180,126,161,0,108
-chr21	37846354	chr21:37846354:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<19>,<20>,<23>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,9,0,0:16:255,255,240,178,0,151,255,157,177,255,255,247,167,255,255	2/4:0,0,12,1,5:18:255,255,255,141,141,102,255,255,123,255,255,255,0,184,255	1/3:0,8,0,12,0:21:255,255,255,255,196,255,229,0,217,192,255,255,255,229,255
-chr21	37847391	chr21:37847391:M	CTGCACCTGCAC	<1.8>	.	.	Motif=CTGCAC	GT:AD:DP:PL	1/1:0,25:26:255,72,0	1/1:0,21:21:255,58,0	1/1:0,23:23:255,64,0
-chr21	37850958	chr21:37850958:M	ATTGATTGATTGATT	<2.8>	.	.	Motif=ATTG	GT:AD:DP:PL	1/1:0,5:6:76,17,0	0/0:28,2:30:0,58,255	0/0:25,1:26:0,60,255
-chr21	37851900	chr21:37851900:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,11:31:115,0,255	0/0:30,1:33:0,79,255	0/1:22,16:38:181,0,255
-chr21	37853146	chr21:37853146:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,7:15:81,0,99	0/1:20,11:34:99,0,255	0/0:32,1:37:0,89,255
-chr21	37853836	chr21:37853836:M	ATATATATATGTATATATATATATATA	<16.5>,<20.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,16,6:23:255,175,127,255,0,255	2/2:0,0,1:1:31,31,31,3,3,0	0/1:9,7,0:16:167,0,216,194,237,255
-chr21	37859488	chr21:37859488:M	TATATATATATATATATATATATATATATATATATATATATATA	<13>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,5:5:146,15,0	.	1/1:0,2:2:60,6,0
-chr21	37863847	chr21:37863847:M	TTTTTTTTTTTTTGTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,11:13:255,36,0	1/1:0,5:8:154,18,0
-chr21	37864114	chr21:37864114:M	TTTTTTTTTTTTGTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:133,0,255	0/1:20,17:38:193,0,244	0/1:24,14:40:139,0,255
-chr21	37864862	chr21:37864862:M	TCTCTCTCTCT	<7.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:17,15:33:255,0,255	0/1:16,11:32:179,0,255	0/1:18,16:38:255,0,255
-chr21	37864872	chr21:37864872:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,11:26:82,0,120	0/1:10,5:17:26,0,95	0/1:11,12:29:89,0,121
-chr21	37878265	chr21:37878265:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:39:0,95,255	0/0:39,0:40:0,117,255	0/1:17,19:38:249,0,204
-chr21	37879715	chr21:37879715:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<18.5>,<19.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,10,0:24:255,0,136,175,148,255	0/2:4,3,6:15:141,36,121,0,53,54	0/1:6,6,0:18:156,0,146,90,127,185
-chr21	37880101	chr21:37880101:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:27:237,0,255	0/1:16,10:28:202,0,255	1/1:0,17:22:255,54,0
-chr21	37881471	chr21:37881471:M	GAGAGAGAGAGAGAGAGAGAGAGA	<11>	.	.	Motif=GA	GT:AD:DP:PL	0/1:18,13:32:163,0,250	0/1:13,18:31:233,0,142	1/1:0,37:43:255,122,0
-chr21	37891265	chr21:37891265:M	ACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:51,0:51:0,153,255	0/0:43,0:43:0,129,255	0/1:19,14:33:255,0,255
-chr21	37898583	chr21:37898583:M	AAAAGAAAAAAAAAAAAAAGAAAAAAAGAAAAAGAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:13:0,38,236	0/1:14,15:30:172,0,164	0/0:21,0:24:0,69,255
-chr21	37903723	chr21:37903723:M	AAAAACAAAACAAAACAAAACAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:33,0:33:0,97,255	0/1:18,14:33:170,0,237
-chr21	37914009	chr21:37914009:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<24.5>,<25.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,2,4:8:173,141,127,70,68,49,26,20,0,3	2/3:0,0,3,5:8:188,146,128,61,59,38,37,29,0,14	1/3:0,3,0,6:9:186,133,113,99,70,82,35,0,34,43
-chr21	37914917	chr21:37914917:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,84,255	0/0:39,3:43:0,73,255	0/1:19,21:40:255,0,225
-chr21	37922389	chr21:37922389:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1:35:0,84,255	0/0:26,2:28:0,47,255	0/1:22,13:38:130,0,255
-chr21	37930956	chr21:37930956:M	GTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT	<21>	.	.	Motif=GT	GT:AD:DP:PL	0/0:26,0:27:0,81,255	0/0:28,0:29:0,87,255	0/1:14,9:24:178,0,255
-chr21	37939632	chr21:37939632:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,45:47:255,102,0	1/1:3,48:53:255,92,0	1/1:1,62:68:255,170,0
-chr21	37943341	chr21:37943341:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:13:40,0,102	0/1:7,6:13:62,0,79	0/1:10,5:16:49,0,125
-chr21	37955096	chr21:37955096:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:26,16:42:175,0,255	0/0:37,0:42:0,122,255	0/1:28,18:48:190,0,255
-chr21	37966370	chr21:37966370:M	CACACACACACACACACACACACACACACA	<19>	.	.	Motif=CA	GT:AD:DP:PL	0/0:32,0:34:0,99,255	0/1:16,16:35:255,0,255	0/0:29,0:31:0,93,255
-chr21	37970197	chr21:37970197:M	TGTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGTGTGTGTGTG	<30>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,13:13:223,38,0	1/1:1,5:10:66,1,0	1/1:1,6:7:84,4,0
-chr21	37980924	chr21:37980924:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:30:0,87,255	0/1:17,31:55:255,0,255	0/0:28,0:29:0,87,255
-chr21	37981360	chr21:37981360:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:6:73,0,1	1/1:0,1:1:17,3,0	0/0:2,0:4:0,2,37
-chr21	37987430	chr21:37987430:M	TATGTATGTATGTATGTATGTATGTATGCATGCATGCGTGTGTGTGTGTATGTATGTATGTATGTATGTATGTAT	<12.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:3,0:3:0,9,87	1/1:0,3:5:111,15,0	0/0:6,0:7:0,18,173
-chr21	37987502	chr21:37987502:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<13.2>,<14.2>	.	.	Motif=TATC	GT:AD:DP:PL	2/2:0,0,12:12:255,209,175,36,34,0	1/2:0,9,8:18:255,112,62,127,0,87	2/2:0,0,22:22:255,255,255,66,63,0
-chr21	37987932	chr21:37987932:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:41:255,121,0	0/1:21,27:50:255,0,236	1/1:0,42:44:255,129,0
-chr21	37990432	chr21:37990432:M	AGGAAGGAAGGAAGGAAGGA	<4>	.	.	Motif=AGGA	GT:AD:DP:PL	1/1:0,13:13:167,36,0	0/0:14,3:17:0,9,139	1/1:0,6:6:77,17,0
-chr21	37990451	chr21:37990451:M	AGAAAGAAAAGAAAAAGAAAGAAGAAAG	<11>,<11.5>	.	.	Motif=AGAA	GT:AD:DP:PL	1/1:0,16,4:20:255,60,0,229,1,169	0/1:13,4,1:19:102,0,255,42,255,255	1/2:0,12,5:18:255,72,21,171,0,120
-chr21	37993413	chr21:37993413:M	TGTGTGTGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,42:45:255,127,0	0/1:23,13:38:92,0,205	1/1:0,44:44:255,125,0
-chr21	37993429	chr21:37993429:M	TATATATATATATATA	<7>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,25:36:255,20,0	0/0:29,5:37:0,33,255	0/1:15,14:37:103,0,150
-chr21	38011592	chr21:38011592:M	TTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:22:255,51,0	0/1:9,6:20:127,0,218	1/1:0,16:19:255,53,0
-chr21	38022063	chr21:38022063:M	ACACACACACACACACACACACACACACACACAC	<18>	.	.	Motif=AC	GT:AD:DP:PL	0/0:21,0:22:0,64,255	0/1:8,7:15:76,0,93	0/0:31,0:33:0,96,255
-chr21	38023059	chr21:38023059:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,5:21:40,0,195	0/0:22,0:22:0,64,255	0/1:4,3:8:30,0,58
-chr21	38026017	chr21:38026017:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:68,9,0	1/1:0,3:3:87,9,0	.
-chr21	38028769	chr21:38028769:M	AGGAGAAGGAGGAGGAGGAGGTGGTGGTGGAGGAGGAGGAGGAGGAGGA	<14.3>	.	.	Motif=AGG	GT:AD:DP:PL	0/0:5,0:6:0,6,124	0/0:2,0:2:0,6,58	0/1:6,9:16:199,0,123
-chr21	38034812	chr21:38034812:M	AAATAAATAAATAAATAAAT	<4>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:11,5:17:37,0,136	0/0:38,0:38:0,110,255	0/0:11,2:13:0,5,148
-chr21	38037800	chr21:38037800:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTG	<13>,<17>,<18>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,15,9,0:24:255,241,196,255,0,255,255,149,255,255	2/3:0,0,16,14:30:255,255,255,225,226,139,255,255,0,171	0/1:15,17,0,0:33:255,0,255,255,255,255,255,255,255,255
-chr21	38053207	chr21:38053207:M	CACACACACACACACACACACACACACACACAC	<14.5>,<18.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,7:16:255,183,161,212,0,210	0/2:15,0,7:25:130,188,255,0,255,255	0/1:9,15,0:25:255,0,178,255,226,255
-chr21	38074884	chr21:38074884:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,11:32:92,0,251	0/0:27,1:32:0,74,255	0/1:16,15:34:167,0,183
-chr21	38075752	chr21:38075752:M	AAAAAAAAAAAAAAAGAAAAGAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:118,0,92	0/1:10,9:23:100,0,105	0/0:15,2:19:0,22,230
-chr21	38077058	chr21:38077058:M	ACACACACACACACACACACACACACACACACACTCACACACAC	<23>,<24>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/3:8,0,0,13:22:255,255,255,216,255,255,0,133,212,180	1/3:0,9,1,2:12:185,54,24,137,18,129,146,0,130,224	0/2:7,0,11,0:18:255,178,244,0,113,148,179,255,186,255
-chr21	38088584	chr21:38088584:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:37:255,0,188	0/1:12,17:31:219,0,128	0/0:28,1:30:0,70,255
-chr21	38091632	chr21:38091632:M	AAAAAAAAAAAAAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,10:31:92,0,255	0/1:16,9:26:80,0,202	0/0:18,1:20:0,41,255
-chr21	38099746	chr21:38099746:M	TTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,17:24:245,0,39	0/1:7,11:22:153,0,67	0/0:18,3:23:0,14,255
-chr21	38100079	chr21:38100079:M	AAAAAAAAAGAAAAAGAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,11:27:130,0,215	0/1:13,12:25:142,0,160	0/0:39,0:39:0,115,255
-chr21	38103743	chr21:38103743:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,8:31:130,0,255	0/1:15,9:27:177,0,255	0/0:34,0:36:0,105,255
-chr21	38106141	chr21:38106141:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:90,17,0	1/1:0,4:4:58,11,0	1/1:1,8:9:104,11,0
-chr21	38108213	chr21:38108213:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,13,11:24:255,193,246,229,0,255	1/2:3,11,5:19:175,40,93,143,0,255	2/2:4,0,27:31:255,255,255,21,81,0
-chr21	38112872	chr21:38112872:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:20:127,0,108	0/1:6,8:15:96,0,71	0/0:28,2:30:0,52,255
-chr21	38115945	chr21:38115945:M	TACTACTACTA	<2.7>	.	.	Motif=TAC	GT:AD:DP:PL	0/1:24,7:31:46,0,255	0/1:22,8:30:60,0,255	0/0:43,0:43:0,127,255
-chr21	38116882	chr21:38116882:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,16:24:223,0,76	0/1:9,10:21:116,0,106	0/0:16,1:20:0,40,255
-chr21	38122819	chr21:38122819:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,19:34:255,0,255	0/1:14,17:33:255,0,255	0/0:43,0:45:0,134,255
-chr21	38124727	chr21:38124727:M	AAAAAAAAAAGGAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,20:37:255,0,212	0/1:17,21:38:255,0,191	0/0:37,0:37:0,109,255
-chr21	38126691	chr21:38126691:M	ACACACACACACACACACACACACAC	<16>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,13:28:255,0,255	0/1:20,10:30:246,0,255	0/0:32,0:33:0,99,255
-chr21	38133687	chr21:38133687:M	ATATATATATATATATATAT	<9>	.	.	Motif=AT	GT:AD:DP:PL	0/1:11,20:32:255,0,113	1/1:0,19:23:255,19,0	0/0:39,0:40:0,117,255
-chr21	38137397	chr21:38137397:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,13:22:255,0,106	0/1:12,7:22:132,0,255	0/0:26,1:31:0,56,255
-chr21	38147210	chr21:38147210:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,20:36:255,0,176	0/1:8,16:25:204,0,76	0/0:24,0:24:0,71,255
-chr21	38149138	chr21:38149138:M	ACACACACACACGCACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,18:18:255,53,0	1/1:4,29:33:255,27,0	1/1:0,29:29:255,85,0
-chr21	38163737	chr21:38163737:M	CTTCTCCTTCTTCTTCATCTCTGTCTTTTTCTTCTCTTCTTC	<13>	.	.	Motif=CTT	GT:AD:DP:PL	0/1:10,8:18:57,0,82	0/1:8,7:15:50,0,61	0/0:28,0:28:0,78,255
-chr21	38172637	chr21:38172637:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:9:36,0,64	0/1:7,7:17:74,0,92	0/0:10,1:11:0,15,159
-chr21	38182537	chr21:38182537:M	GAGAGAGAGAGAGAGAGAGAGAAAAAGAGAGAGAGAAAAAAAAGAGAGAGAGAGAGA	<26.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:10,8:19:167,0,217	0/1:12,9:22:185,0,255	0/0:24,0:24:0,72,255
-chr21	38187742	chr21:38187742:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,35:60:255,0,255	0/1:19,23:42:255,0,216	0/0:59,0:59:0,174,255
-chr21	38193147	chr21:38193147:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,23,159	0/1:15,5:20:26,0,195	0/1:17,3:21:0,0,235
-chr21	38193799	chr21:38193799:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:22,2:26:0,30,255	0/0:14,2:17:0,16,210	0/1:9,4:14:29,0,122
-chr21	38202389	chr21:38202389:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,24:51:255,0,255	0/1:35,28:63:255,0,255	0/0:52,2:54:0,121,255
-chr21	38211838	chr21:38211838:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,16:38:189,0,255	0/0:39,1:41:0,102,255	0/0:41,0:43:0,126,255
-chr21	38232138	chr21:38232138:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,15:37:193,0,251	0/1:23,17:42:189,0,255	0/0:41,1:43:0,105,255
-chr21	38237950	chr21:38237950:M	AACAACAACAAGAACAACA	<8.3>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:20,18:38:255,0,255	0/1:21,19:40:255,0,255	0/0:29,0:29:0,87,255
-chr21	38241968	chr21:38241968:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:8:49,0,30	0/1:1,1:2:11,0,11	0/1:6,1:9:11,0,77
-chr21	38256361	chr21:38256361:M	TATATATATATATATATATAATAT	<14>,<18>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,25,3:29:255,81,6,255,0,255	1/1:0,12,0:14:255,36,0,255,24,255	2/2:0,0,5:7:167,167,167,18,18,0
-chr21	38268551	chr21:38268551:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<28>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,4:21:255,48,77,255,0,255	2/2:1,0,5:7:72,90,164,5,20,0	1/1:0,11,0:13:255,36,0,255,36,255
-chr21	38277028	chr21:38277028:M	TGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,42:42:255,126,0	1/1:0,44:44:255,132,0	1/1:0,31:33:255,96,0
-chr21	38304059	chr21:38304059:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,37:39:255,77,0	1/1:1,42:43:255,109,0	1/1:2,41:46:255,98,0
-chr21	38306372	chr21:38306372:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:37:255,111,0	1/1:0,36:38:255,111,0	1/1:0,38:39:255,114,0
-chr21	38316512	chr21:38316512:M	ATATATATATATATGAAATATATATATATTTCTATATATAT	<19.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,5:5:91,15,0	1/1:0,17:17:255,50,0
-chr21	38319388	chr21:38319388:M	ACACACACACA	<4.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:3:39,8,0	1/1:0,4:4:51,11,0	1/1:0,3:3:39,8,0
-chr21	38327939	chr21:38327939:M	AAAGAAAGAAAGAAAGAAAGAAAG	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:29,0:34:0,90,255	0/0:25,0:27:0,77,255	0/1:20,21:43:255,0,255
-chr21	38334621	chr21:38334621:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,20:33:255,0,124	0/1:13,12:26:134,0,162	0/0:20,3:25:0,16,255
-chr21	38354650	chr21:38354650:M	ACACACACACACACACACAC	<11>,<12>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,22,0:35:255,0,148,255,247,255	0/2:17,2,13:32:255,201,255,0,255,255	0/1:20,13,1:34:156,0,255,189,255,255
-chr21	38356732	chr21:38356732:M	CACACACACACACACA	<9>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,14:33:179,0,255	0/0:30,0:31:0,88,255	0/1:16,10:27:112,0,232
-chr21	38386790	chr21:38386790:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,4:54:212,0,255	0/1:22,20:44:253,0,255	0/1:20,2:56:255,0,215
-chr21	38391956	chr21:38391956:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,19:39:242,0,255	0/1:18,14:33:151,0,237	0/1:23,20:43:239,0,255
-chr21	38397597	chr21:38397597:M	AAAAAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,1,1:4:12,3,23,3,0,22	1/2:0,3,1:4:53,16,15,48,0,72	2/2:0,0,3:3:50,58,84,9,9,0
-chr21	38402713	chr21:38402713:M	AAAAAAAAAAAAAAAAAAAGAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:13:35,0,59	0/0:9,0:9:0,25,119	1/1:3,9:16:124,4,0
-chr21	38406155	chr21:38406155:M	AAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:255,30,0	1/1:0,4:7:147,19,0	1/1:0,5:7:174,21,0
-chr21	38407635	chr21:38407635:M	TATATATATATTTAATGTATATTATATGTATACTATATATCACCTATATATAATATAT	<32>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,9:11:255,32,0	1/1:0,2:3:68,9,0	1/1:0,6:7:193,21,0
-chr21	38418271	chr21:38418271:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<20>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,21,0:24:255,71,0,255,70,255	1/2:0,11,11:23:255,192,125,201,0,137	1/1:0,18,0:22:255,53,0,255,62,255
-chr21	38418928	chr21:38418928:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAAA	<41>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:7:81,12,0	1/1:0,0:1:2,1,0	1/1:0,4:8:139,19,0
-chr21	38419509	chr21:38419509:M	ATACACATACACACACACA	<3.5>	.	.	Motif=ATACAC	GT:AD:DP:PL	1/1:1,39:40:255,93,0	1/1:0,33:34:255,99,0	1/1:0,32:32:255,96,0
-chr21	38420032	chr21:38420032:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,0:39:0,116,255	0/1:16,10:27:188,0,255	0/0:39,0:43:0,122,255
-chr21	38420289	chr21:38420289:M	TGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,28:30:255,69,0	0/1:11,19:31:255,0,107	0/1:12,15:27:199,0,144
-chr21	38423085	chr21:38423085:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:8,13:21:166,0,79	0/1:7,9:18:119,0,65	0/0:17,2:19:0,21,255
-chr21	38423982	chr21:38423982:M	AAAAGAAAAGAAAAGAAAAGAAA	<5.6>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:18,17:35:226,0,245	0/1:21,14:35:152,0,255	0/1:23,18:41:218,0,255
-chr21	38426770	chr21:38426770:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,239	0/0:26,0:26:0,76,255	0/1:14,20:35:255,0,167
-chr21	38426931	chr21:38426931:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,34:34:255,100,0	1/1:1,36:37:255,91,0	1/1:1,30:32:255,76,0
-chr21	38429348	chr21:38429348:M	ACATATACATATATAATATGTACACATATACATATA	<2.7>	.	.	Motif=ACATAT	GT:AD:DP:PL	0/1:23,6:37:205,0,255	0/1:13,2:16:52,0,255	0/1:15,12:32:255,0,255
-chr21	38429655	chr21:38429655:M	ATATATACATATATGTGTATATATGTATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,1:1:40,3,0	.	1/1:0,4:4:156,12,0
-chr21	38429747	chr21:38429747:M	ACACACACACACACACACCACA	<13>,<14>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,41,1:44:255,126,0,255,111,255	1/2:0,21,15:39:255,238,127,255,0,175	1/1:1,38,0:42:255,95,0,255,94,255
-chr21	38430080	chr21:38430080:M	TATTTTTTTTTTATTTTTA	<3>	.	.	Motif=TATTTT	GT:AD:DP:PL	0/1:13,11:24:189,0,237	0/0:35,0:35:0,105,255	0/1:14,21:35:255,0,228
-chr21	38436013	chr21:38436013:M	TTTTTTTCTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:99,0,97	0/1:8,4:13:43,0,100	0/1:7,8:16:96,0,88
-chr21	38436881	chr21:38436881:M	TTTTTTTTTTCTTTCTCTCTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,16:23:226,0,52	0/0:14,1:15:0,27,227	0/1:9,10:19:124,0,106
-chr21	38440788	chr21:38440788:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<15>,<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	3/3:0,0,0,4:7:128,128,128,124,124,121,13,13,13,0	1/1:0,8,0,0:11:255,27,0,255,27,249,255,27,255,255	2/3:0,0,5,4:9:255,251,247,112,112,92,134,130,0,118
-chr21	38444727	chr21:38444727:M	AAAAAAAAAAAAAA	<12>,<13>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	3/4:0,0,0,12,8:21:255,255,255,255,255,255,154,155,155,97,188,221,220,0,161	1/3:1,10,0,5,1:18:255,79,128,255,147,255,255,0,179,255,255,78,251,255,255	2/4:0,1,13,0,12:26:255,255,255,255,255,255,255,255,215,255,240,214,0,255,255
-chr21	38445116	chr21:38445116:M	CTTTCTTTCTTTCTTTCTT	<3.8>	.	.	Motif=CTTT	GT:AD:DP:PL	0/0:19,0:21:0,31,255	0/0:28,0:28:0,82,255	0/1:11,8:23:120,0,141
-chr21	38446227	chr21:38446227:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:3,0:4:0,9,88	1/1:0,31:32:255,96,0
-chr21	38448003	chr21:38448003:M	AGTATTAGTATT	<1.8>	.	.	Motif=AGTATT	GT:AD:DP:PL	0/0:47,0:47:0,141,255	0/1:16,23:39:255,0,255	0/1:26,24:50:255,0,255
-chr21	38450206	chr21:38450206:M	AAAAAAAAAACAAAGAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,24:26:255,58,0	1/1:0,19:20:255,58,0	1/1:0,31:31:255,91,0
-chr21	38453883	chr21:38453883:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,11:12:255,33,0	0/1:4,3:9:56,0,95	0/1:12,5:18:83,0,255
-chr21	38455095	chr21:38455095:M	TTTCTTTCTTTCTTTCTTTCTTTCTTT	<6.2>,<6.5>	.	.	Motif=TTTC	GT:AD:DP:PL	1/1:0,22,0:29:181,58,0,129,38,94	1/2:0,9,14:25:86,39,16,35,0,1	1/2:0,13,11:28:107,34,4,52,0,16
-chr21	38455119	chr21:38455119:M	TTTTTTTTTTTTTTT	<14>,<17>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,24:28:255,255,255,48,66,0	1/2:0,21,9:30:255,221,170,255,0,255	1/2:0,19,12:32:255,255,255,255,0,255
-chr21	38456587	chr21:38456587:M	ATCCCCATCCCCATC	<2.8>	.	.	Motif=ATCCCC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,34:34:255,102,0	1/1:0,45:45:255,135,0
-chr21	38457436	chr21:38457436:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:2,2,22:26:255,255,255,39,39,0	1/2:0,17,17:35:255,248,194,255,0,205	1/2:0,14,9:23:255,136,94,248,0,184
-chr21	38458424	chr21:38458424:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,9,157	0/1:2,3:5:67,0,39	0/1:4,4:10:87,0,90
-chr21	38466301	chr21:38466301:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20.5>,<22.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,9:25:255,229,169,255,0,255	1/2:0,8,7:16:255,169,132,209,0,176	2/2:0,1,14:18:255,255,255,50,19,0
-chr21	38468983	chr21:38468983:M	AAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:16:255,47,0	1/1:0,16:19:255,54,0	1/1:0,16:16:255,48,0
-chr21	38470258	chr21:38470258:M	TATTATTATTATTATTATTATTATTGTTATAATTAT	<11>	.	.	Motif=TAT	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:0,19:19:255,56,0	1/1:0,33:33:255,97,0
-chr21	38473160	chr21:38473160:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,48,0	1/1:0,10:13:255,33,0	1/1:0,12:16:255,44,0
-chr21	38473795	chr21:38473795:M	TGTGTGTGTGTGTGTATGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,18:19:187,40,0	0/1:9,6:16:33,0,53	1/1:5,16:21:121,2,0
-chr21	38473836	chr21:38473836:M	ATGTGTATGTGTACATGTTTGCGTATGTATGCATGTGTATGTGTGAGCGTATGTGTGTGTAAGTGTTGTATATGTGTGTATGTGTGTGTATATGTATGTGT	<11.5>	.	.	Motif=ATGTGT	GT:AD:DP:PL	1/1:0,8:9:209,27,0	1/1:0,10:10:243,30,0	1/1:0,11:11:255,33,0
-chr21	38474732	chr21:38474732:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,34:35:255,85,0	1/1:0,36:40:255,114,0	1/1:0,39:40:255,117,0
-chr21	38476984	chr21:38476984:M	TTCTTTTTTCTTTTCTTTCTTTC	<6.2>	.	.	Motif=TTCT	GT:AD:DP:PL	1/1:0,11:11:228,33,0	1/1:0,11:12:227,33,0	1/1:0,23:23:255,68,0
-chr21	38485462	chr21:38485462:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:208,23,0	0/1:3,9:13:126,0,14	1/1:1,11:14:194,22,0
-chr21	38487121	chr21:38487121:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,28:30:255,53,0	1/1:1,16:17:255,32,0	1/1:0,20:22:255,64,0
-chr21	38491207	chr21:38491207:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,26:32:255,20,0	1/1:1,20:25:255,45,0	1/1:0,20:24:255,67,0
-chr21	38503369	chr21:38503369:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,37:42:255,67,0	1/1:2,33:37:255,72,0	1/1:1,38:40:255,99,0
-chr21	38507527	chr21:38507527:M	TGAATGAGTGAATGAATGAATGAATGAATGAATGAA	<10>,<11>	.	.	Motif=TGAA	GT:AD:DP:PL	1/2:0,9,8:17:255,153,106,149,0,125	1/2:0,9,15:24:255,255,203,139,0,94	1/2:0,14,12:26:255,223,151,225,0,189
-chr21	38507950	chr21:38507950:M	CACACACACGCACATGCACACACACAGAGACACACAGACACACACACATGCACACACACAGAGACACACAAACACACA	<8>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,3:3:84,9,0	1/1:0,4:6:112,12,0	0/1:4,1:7:11,0,99
-chr21	38513130	chr21:38513130:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:1,36:37:255,91,0	1/1:1,43:45:255,114,0
-chr21	38513139	chr21:38513139:M	AATAATAATAATA	<4.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:40,1:41:0,92,255	0/0:46,0:47:0,115,255	0/1:23,23:46:86,0,86
-chr21	38518237	chr21:38518237:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT	<11.8>,<12.8>	.	.	Motif=TATC	GT:AD:DP:PL	1/2:0,12,7:19:255,113,77,224,0,172	2/2:1,0,18:19:255,255,255,38,56,0	0/1:7,12,0:19:255,0,147,218,126,255
-chr21	38520033	chr21:38520033:M	AACAAAAACAAAAA	<2.5>	.	.	Motif=AACAAA	GT:AD:DP:PL	1/1:0,29:30:255,89,0	0/1:25,17:43:243,0,255	1/1:0,49:50:255,148,0
-chr21	38537442	chr21:38537442:M	ATATATATATATATGTATATA	<8.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:48,0:49:0,144,255	0/0:31,0:31:0,93,255	0/1:26,22:49:255,0,255
-chr21	38539894	chr21:38539894:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,8,46	0/0:7,0:8:0,23,130	0/1:2,6:10:86,0,16
-chr21	38541913	chr21:38541913:M	AAATTAAATTAAATT	<4>	.	.	Motif=AAATT	GT:AD:DP:PL	0/1:17,10:27:114,0,250	0/0:43,0:43:0,127,255	0/1:20,19:39:243,0,255
-chr21	38543738	chr21:38543738:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:18:128,0,149	0/0:9,0:10:0,27,239	0/0:14,0:19:0,37,255
-chr21	38548451	chr21:38548451:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:20:89,0,163	0/1:17,5:22:23,0,232	0/0:35,1:39:0,95,255
-chr21	38548615	chr21:38548615:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:4:124,12,0	0/0:0,0:2:0,3,14	0/1:2,1:5:28,0,62
-chr21	38552847	chr21:38552847:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:15,1,3:21:43,46,255,0,250,255	0/0:36,1,0:38:0,94,255,111,255,255	1/2:1,14,8:24:255,131,83,189,0,188
-chr21	38555327	chr21:38555327:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,15:36:176,0,255	0/0:45,0:45:0,132,255	0/1:20,18:40:231,0,249
-chr21	38559384	chr21:38559384:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,0:5:5,0,22	1/1:0,0:3:5,2,0	0/1:5,4:10:35,0,63
-chr21	38572193	chr21:38572193:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:7:125,21,0	0/1:2,6:9:85,0,8	0/1:10,5:19:34,0,156
-chr21	38579826	chr21:38579826:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,5:22:38,0,234	0/0:19,0:20:0,58,255	0/1:11,6:18:57,0,158
-chr21	38586177	chr21:38586177:M	ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA	<9.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,20:20:255,255,255,60,60,0	1/2:0,8,1:10:255,28,1,255,0,255	2/2:0,0,2:4:104,103,103,9,8,0
-chr21	38587361	chr21:38587361:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:28:175,0,175	0/1:4,14:18:191,0,17	1/1:2,16:18:252,17,0
-chr21	38592572	chr21:38592572:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>,<16>,<19>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,9,0,8:18:255,144,191,255,221,255,255,0,255,237	2/3:0,0,14,10:24:255,255,255,171,255,232,255,255,0,255	1/1:0,37,0,0:38:255,114,0,255,114,255,255,114,255,255
-chr21	38596057	chr21:38596057:M	GGGGGGGGGGGG	<10>,<11>	.	.	Motif=G	GT:AD:DP:PL	0/2:7,0,2:9:10,31,206,0,124,101	0/2:16,2,9:27:100,96,255,0,238,198	1/1:0,7,0:7:197,21,0,143,21,124
-chr21	38597473	chr21:38597473:M	ACACACACACACACACACACACACACACGCACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,21,4:26:255,97,30,255,0,255	1/1:0,28,0:29:255,83,0,255,84,255	2/2:0,0,24:26:255,255,255,78,72,0
-chr21	38610527	chr21:38610527:M	GTGTGTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/1:17,12:30:119,0,205	0/0:37,1:38:0,94,255
-chr21	38619327	chr21:38619327:M	TCCTCATCCTCCTCCTCTCTATTCCTCTTGCTCCCTCCCCTCATCCTCCTCCTC	<5.7>	.	.	Motif=TCC	GT:AD:DP:PL	0/1:12,11:23:208,0,222	0/1:11,8:19:140,0,211	0/1:21,13:34:218,0,255
-chr21	38627944	chr21:38627944:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,6:19:54,0,176	1/1:2,8:15:133,2,0	0/0:23,0:24:0,68,255
-chr21	38633879	chr21:38633879:M	AAAAAAAAAAAAA	<14>,<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/3:0,12,0,9:21:255,246,208,255,166,255,223,0,222,255	2/3:0,2,14,13:32:255,255,255,254,223,174,247,174,0,179	1/1:4,33,2,1:40:255,41,0,255,68,255,255,83,255,255
-chr21	38646280	chr21:38646280:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:9:44,0,62	0/1:6,4:12:44,0,70	0/0:12,0:14:0,40,224
-chr21	38660031	chr21:38660031:M	GGAAAGGAAAGG	<1.2>	.	.	Motif=GGAAA	GT:AD:DP:PL	0/0:23,0:23:0,69,255	0/0:50,0:50:0,150,255	0/1:13,12:25:255,0,255
-chr21	38662293	chr21:38662293:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,17:29:244,0,122	0/1:12,13:26:155,0,146	0/1:18,17:35:209,0,228
-chr21	38663352	chr21:38663352:M	GAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/0:48,0:48:0,144,255	0/0:34,0:34:0,102,255	0/1:19,10:30:184,0,255
-chr21	38671906	chr21:38671906:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/0:34,4:38:0,42,255	0/1:19,12:34:136,0,250
-chr21	38673768	chr21:38673768:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/1:9,12:21:169,0,112	0/1:7,20:27:255,0,48	0/1:9,17:26:242,0,93
-chr21	38675358	chr21:38675358:M	AAAAAAAAAAAAAAAAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:21,0,21	0/1:5,3:9:56,0,117	0/1:8,1:11:1,0,198
-chr21	38685288	chr21:38685288:M	AAATAAATAAATAAATAAATAAATAAATAAATAA	<9.5>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:18,0:18:0,53,255	0/1:13,10:23:120,0,177
-chr21	38692825	chr21:38692825:M	AAAAAAAAGAAAGGAAAAAAAAAAAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,47,0	0/1:3,7:13:93,0,34	0/1:9,11:22:149,0,97
-chr21	38703696	chr21:38703696:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,10:30:107,0,227	0/1:7,5:15:44,0,107	0/1:16,6:24:40,0,228
-chr21	38707309	chr21:38707309:M	ATATATATATATATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13:16:255,41,0	1/1:0,6:7:175,21,0	1/1:0,10:10:255,30,0
-chr21	38707403	chr21:38707403:M	ATATATATATAT	<7>	.	.	Motif=AT	GT:AD:DP:PL	0/1:9,14:25:203,0,106	0/1:5,10:15:138,0,47	0/1:11,20:31:255,0,115
-chr21	38711058	chr21:38711058:M	AAAAAAAATAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:42:255,0,255	0/1:22,9:32:164,0,255	0/1:14,21:35:255,0,255
-chr21	38713078	chr21:38713078:M	GGGGGGAGGGGGGGGCGGGGGGGGGG	<27>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:50,9,0	0/1:1,1:2:10,0,10	1/1:0,2:3:33,6,0
-chr21	38718363	chr21:38718363:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:11:97,0,31	0/1:12,9:21:94,0,147	0/1:12,8:20:85,0,156
-chr21	38724538	chr21:38724538:M	GATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<11.5>,<14.5>	.	.	Motif=GATA	GT:AD:DP:PL	0/1:15,5,0:25:63,0,234,116,152,255	0/1:10,8,0:22:123,0,139,172,103,255	1/2:1,10,9:24:235,76,176,195,0,238
-chr21	38724617	chr21:38724617:M	AGCTAGCTAGCTA	<4.2>	.	.	Motif=AGCT	GT:AD:DP:PL	0/1:18,24:42:255,0,255	0/1:17,10:27:200,0,255	0/1:21,32:53:255,0,255
-chr21	38726735	chr21:38726735:M	TTTCTTTTTCTTTTCTTT	<2.2>	.	.	Motif=TTTCTT	GT:AD:DP:PL	0/1:33,11:46:161,0,255	0/1:36,10:51:122,0,255	0/1:45,16:63:240,0,255
-chr21	38732116	chr21:38732116:M	TTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:2:0,6,28	0/1:2,3:5:34,0,18	0/1:1,1:2:11,0,11
-chr21	38733539	chr21:38733539:M	TTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<42>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/1:10,13:23:255,0,205	0/0:24,0:24:0,72,255
-chr21	38735929	chr21:38735929:M	AAAAAAAAAAGAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,97,0	1/1:1,27:28:255,65,0	0/1:25,22:47:255,0,255
-chr21	38737615	chr21:38737615:M	AAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAAAAAATAAAAAAAAAAAGAAAA	<56>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:173,21,0	1/1:0,3:3:82,9,0	0/1:5,5:14:104,0,124
-chr21	38757606	chr21:38757606:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:4,8:12:123,0,42	0/1:7,9:16:119,0,80	0/1:10,15:25:212,0,115
-chr21	38762099	chr21:38762099:M	TTTTTTTTTTTTTCTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:24:99,0,211	1/1:3,33:37:255,55,0	0/1:12,19:32:255,0,126
-chr21	38773030	chr21:38773030:M	AAGAAGAGAAGGCAAGAAGAAGAAGAAGAA	<9>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,26:26:255,77,0	0/1:13,18:31:236,0,144	1/1:0,38:38:255,112,0
-chr21	38781316	chr21:38781316:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	.	.	0/1:1,3:4:67,0,15
-chr21	38793516	chr21:38793516:M	TTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:27:255,69,0	0/1:13,16:34:255,0,255	1/1:1,17:23:255,38,0
-chr21	38799325	chr21:38799325:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:49:255,145,0	0/1:23,20:43:232,0,255	1/1:0,54:54:255,159,0
-chr21	38799673	chr21:38799673:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,32:35:255,65,0	0/1:17,12:31:125,0,235	1/1:1,25:26:255,58,0
-chr21	38807418	chr21:38807418:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,7:12:209,102,86,41,0,46	0/1:6,2,1:11:17,0,74,11,82,157	1/2:1,2,3:8:100,49,49,12,0,23
-chr21	38808580	chr21:38808580:M	GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGTGTGTGT	<27.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,5:5:135,15,0	0/1:6,7:15:148,0,129	1/1:0,16:16:255,48,0
-chr21	38812782	chr21:38812782:M	AATAATAATAATAATAAT	<5>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,25:25:255,74,0	0/1:22,16:38:178,0,255	1/1:0,31:31:255,92,0
-chr21	38815171	chr21:38815171:M	TGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<19.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:1,27,0:29:255,66,0,255,84,255	0/1:22,12,0:38:115,0,255,213,255,255	1/2:0,11,15:26:255,255,255,199,0,240
-chr21	38834774	chr21:38834774:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:43:0,127,255	0/0:22,0:23:0,67,255	0/1:21,27:49:255,0,241
-chr21	38836215	chr21:38836215:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,0:25:0,74,255	0/1:20,17:37:255,0,255	0/0:31,0:31:0,93,255
-chr21	38836788	chr21:38836788:M	AAGAAGAAGAAGA	<3.7>	.	.	Motif=AAG	GT:AD:DP:PL	0/0:13,0:13:0,39,255	0/1:8,3:11:49,0,191	0/0:21,0:21:0,63,255
-chr21	38837711	chr21:38837711:M	ACACACATACACACACACACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:12,4:16:23,0,163	0/1:8,10:18:115,0,81	0/0:23,1:24:0,53,255
-chr21	38848893	chr21:38848893:M	TTTTTTCTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,41:42:255,105,0	0/1:16,18:34:214,0,181	1/1:4,28:33:255,25,0
-chr21	38854557	chr21:38854557:M	AGAAAAGAACAGAAAA	<3.4>	.	.	Motif=AGAAA	GT:AD:DP:PL	1/1:0,46:46:255,138,0	0/1:19,17:36:255,0,255	1/1:0,48:48:255,144,0
-chr21	38866716	chr21:38866716:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:12:54,0,90	0/1:2,4:6:51,0,17	0/0:20,0:21:0,61,255
-chr21	38867617	chr21:38867617:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT	<12>,<13>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,7,10:17:255,165,144,133,0,86	1/2:0,6,8:14:255,123,105,108,0,68	2/2:0,0,15:15:255,255,255,44,44,0
-chr21	38870270	chr21:38870270:M	TGTGTGTGCGTGCATGTGTGTGTGTGTTTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:28,0:29:0,85,255	0/0:25,0:25:0,74,255	0/1:13,14:27:182,0,163
-chr21	38874621	chr21:38874621:M	AAAAAAAAAATAAAAAATAAAAAATAAAATAAAATAAAA	<40>,<50>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,6:18:255,153,117,225,0,255	1/1:2,12,0:14:180,6,0,219,41,255	1/2:0,15,5:20:255,124,80,255,0,255
-chr21	38878438	chr21:38878438:M	AAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:28,2,23:55:255,255,255,0,255,255	2/2:0,1,30:34:255,255,255,90,70,0	0/1:17,29,0:46:255,0,176,255,255,255
-chr21	38886454	chr21:38886454:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,3:37:0,52,255	0/0:38,3:42:0,70,255	0/1:19,17:38:211,0,246
-chr21	38904148	chr21:38904148:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16.5>,<18.5>,<28.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:2,14,12,0:29:255,180,255,226,0,255,255,255,255,255	1/1:0,23,0,0:25:255,73,0,255,75,255,255,75,255,255	2/3:0,0,11,6:17:255,255,255,164,164,131,190,255,0,255
-chr21	38905111	chr21:38905111:M	TAGATAGAAAGATAGATAGATAGATAGATAGACAGATAGATAGATAGAT	<33.8>	.	.	Motif=TAGA	GT:AD:DP:PL	0/0:34,0:34:0,102,255	0/0:21,0:21:0,63,255	0/1:20,7:27:6,0,255
-chr21	38908412	chr21:38908412:M	TTCCCATTCCCAT	<1.7>	.	.	Motif=TTCCCA	GT:AD:DP:PL	0/0:35,1:36:0,81,255	0/1:18,6:24:89,0,255	0/0:38,0:38:0,114,255
-chr21	38911271	chr21:38911271:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/0:46,0:46:0,136,255	0/0:28,0:28:0,82,255	0/1:10,16:26:222,0,110
-chr21	38915411	chr21:38915411:M	ATATATATATATATATATATATA	<9.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,28,6:37:255,92,0,255,32,255	1/1:0,19,6:28:255,66,0,249,9,175	1/2:0,20,30:50:255,255,198,221,0,87
-chr21	38916606	chr21:38916606:M	TTTGTTTGTTTGTTT	<2.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:28,0:28:0,83,255	0/0:29,0:29:0,85,255	0/1:31,16:47:163,0,255
-chr21	38917678	chr21:38917678:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:25:255,54,0	1/1:1,23:24:255,53,0	1/1:1,36:37:255,91,0
-chr21	38920349	chr21:38920349:M	TTTTTTTTTCTTTTTTTTTTTTTTGTTTGTTTGTTTGTTTTTT	<50>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:18:255,54,0	1/1:0,18:19:255,57,0	1/1:0,2:4:76,11,0
-chr21	38924493	chr21:38924493:M	AAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:6:128,17,0	1/1:0,5:6:148,18,0	1/1:0,8:8:219,24,0
-chr21	38931367	chr21:38931367:M	AACAACAACAA	<4.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/1:0,33:33:255,99,0	1/1:0,32:33:255,89,0	1/1:0,33:34:255,102,0
-chr21	38934489	chr21:38934489:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,17:20:255,3,0	0/1:4,16:21:227,0,9	1/1:1,16:17:255,32,0
-chr21	38963875	chr21:38963875:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<22>,<25>,<67.5>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,1,1:2:38,38,38,12,12,9,27,27,0,24	2/3:0,0,4,3:7:142,142,142,35,35,23,106,106,0,98	1/1:0,5,0,0:5:146,15,0,146,15,146,146,15,146,146
-chr21	38965049	chr21:38965049:M	AAAAAAAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,1,1	0/0:0,0:1:0,0,0	1/1:0,7:11:229,16,0
-chr21	38966587	chr21:38966587:M	CCCCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	1/1:0,19:23:255,66,0	1/1:0,11:11:255,33,0	1/1:0,7:7:181,21,0
-chr21	38967399	chr21:38967399:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:3:2,1,0	1/1:0,0:2:2,1,0	1/1:0,7:9:229,24,0
-chr21	38973998	chr21:38973998:M	CTCTCTCTCTCTCTTTCTCTCTCTCTCTCT	<16>	.	.	Motif=CT	GT:AD:DP:PL	0/0:24,0:25:0,74,255	0/0:26,0:28:0,82,255	0/1:16,11:29:126,0,219
-chr21	38982396	chr21:38982396:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,25:37:255,0,75	0/1:12,17:30:211,0,117	0/1:16,13:32:154,0,198
-chr21	38986349	chr21:38986349:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:20:0,56,255	0/1:4,7:12:161,0,75	0/0:16,0:19:0,54,255
-chr21	38994771	chr21:38994771:M	TCTCTGTCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTGTGTGTCTCTCTGTCTCCCCTCTCCCTCTCTCTCTCTGTCTCTC	<10>,<30.5>	.	.	Motif=TC	GT:AD:DP:PL	1/2:0,3,1:6:188,40,31,148,0,142	0/0:1,0,0:1:0,3,28,3,28,28	1/2:0,6,8:14:255,200,182,255,0,255
-chr21	38997796	chr21:38997796:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,23,14:39:255,255,161,255,0,255	2/2:1,2,22:27:255,255,255,46,33,0	1/1:3,40,5:49:255,86,0,255,51,255
-chr21	39001725	chr21:39001725:M	TAAAAAAAAAAAAAAAAATACATAAAATAAAATAAAA	<7.6>,<7.8>	.	.	Motif=TAAAA	GT:AD:DP:PL	0/1:4,4,2:11:65,0,48,21,32,115	1/2:1,6,3:10:157,38,29,80,0,95	0/0:13,0,0:15:0,43,255,44,255,255
-chr21	39015385	chr21:39015385:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:18:101,0,103	1/1:0,12:13:213,37,0	0/1:14,11:26:118,0,182
-chr21	39016706	chr21:39016706:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:0,19:20:255,57,0	1/1:0,21:23:255,66,0
-chr21	39019459	chr21:39019459:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,25:26:255,58,0	1/1:0,31:32:255,94,0	1/1:2,38:40:255,81,0
-chr21	39034634	chr21:39034634:M	AAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:57,6,0	0/1:1,4:6:91,0,13	1/1:0,3:3:85,9,0
-chr21	39045357	chr21:39045357:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:19:0,56,255	0/0:16,1:19:0,38,255	0/1:7,6:15:72,0,88
-chr21	39047035	chr21:39047035:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>,<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,20,0,0:32:255,0,87,255,153,255,255,180,255,255	1/2:1,14,11,0:27:255,171,243,229,0,255,255,189,255,255	0/3:10,2,3,7:23:161,173,255,87,200,224,0,147,149,255
-chr21	39049544	chr21:39049544:M	ACACACACACACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:24,0:27:0,80,255	0/1:15,3:23:50,0,255	0/1:17,9:28:180,0,255
-chr21	39052506	chr21:39052506:M	ACACATACACATATACACACACATACATACACACACA	<14.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,10,17:27:255,255,255,255,0,205	1/2:0,3,7:11:249,175,170,77,0,56	2/2:0,0,21:22:255,255,255,63,63,0
-chr21	39058140	chr21:39058140:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,10:25:113,0,187	1/1:1,21:23:255,50,0	0/1:18,8:29:64,0,254
-chr21	39060531	chr21:39060531:M	ACACACACACACACACACACACAC	<14>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,12:33:225,0,255	1/1:0,26:27:255,78,0	0/1:21,5:28:54,0,255
-chr21	39060676	chr21:39060676:M	ACACACACACACACACACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,12:28:255,0,255	1/1:0,27:28:255,81,0	0/1:22,22:44:255,0,255
-chr21	39064037	chr21:39064037:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,13:26:255,0,255	1/1:0,30:36:255,95,0	0/1:7,10:18:221,0,137
-chr21	39064072	chr21:39064072:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:18,12:30:142,0,255	1/1:0,23:23:255,68,0	0/1:18,20:38:255,0,221
-chr21	39070888	chr21:39070888:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:2,48:50:255,109,0	1/1:0,35:35:255,103,0	1/1:0,41:41:255,121,0
-chr21	39081684	chr21:39081684:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,12:15:170,0,10	0/1:2,8:11:114,0,2	1/1:0,18:19:255,55,0
-chr21	39084771	chr21:39084771:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,4:8:154,59,47,68,0,47	0/2:2,0,1:3:8,14,64,0,33,25	0/2:1,0,4:5:54,57,83,0,17,3
-chr21	39086583	chr21:39086583:M	AAAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32:33:255,99,0	0/1:5,19:25:255,0,73	0/1:9,18:29:255,0,173
-chr21	39092788	chr21:39092788:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,8:14:177,127,221,73,0,117	0/2:13,3,8:24:67,86,255,0,132,198	0/1:7,9,0:17:124,0,72,172,102,255
-chr21	39095165	chr21:39095165:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,10:20:123,0,115	0/1:6,4:13:49,0,76	0/0:17,1:21:0,43,255
-chr21	39102175	chr21:39102175:M	ACACACACACACACACACACACACACACACACACACACACA	<21.5>,<22.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,1,5,5:11:255,205,188,131,116,113,126,68,0,120	1/3:0,5,0,4:11:172,105,99,162,103,168,72,0,81,126	1/2:0,4,5,0:9:188,85,59,57,0,42,200,85,68,240
-chr21	39105744	chr21:39105744:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,23:39:255,0,184	0/1:15,14:31:177,0,175	0/0:42,1:45:0,113,255
-chr21	39112639	chr21:39112639:M	AAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,7,0:25:62,0,234,125,255,255	0/1:19,10,0:31:81,0,255,170,255,255	1/2:2,11,16:31:255,255,255,159,0,236
-chr21	39119685	chr21:39119685:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,3:6:36,0,36	0/1:3,1:4:5,0,39	0/1:10,4:14:29,0,135
-chr21	39125067	chr21:39125067:M	GTGTGTGTGTGTGTGTGTGTGT	<14>,<16>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,14,16:31:255,255,255,255,0,255	1/2:0,15,16:32:255,255,255,255,0,255	1/2:0,18,12:33:255,255,255,255,0,255
-chr21	39125915	chr21:39125915:M	ACACACCAGACACACACACCACACTGACACACACACACACACACACACA	<21.5>,<25.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,7,7:14:255,133,195,211,0,190	1/2:1,4,7:12:206,108,214,103,0,98	1/2:2,8,5:16:255,57,133,203,0,219
-chr21	39127478	chr21:39127478:M	TTTTTTTTTTGTTTTGTTTTGTTTTTTTT	<30>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,13:21:255,255,255,71,0,131	1/2:0,7,8:17:255,200,188,109,0,155	0/2:10,0,5:18:104,139,255,0,191,255
-chr21	39132692	chr21:39132692:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,1,3:5:69,43,40,17,0,6	1/2:0,4,3:7:142,41,29,65,0,46	0/0:1,0,0:1:0,3,29,3,20,17
-chr21	39136482	chr21:39136482:M	ATATATATATATATATATATATAT	<10>,<11>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,15,13:29:255,208,160,255,0,212	1/2:2,19,11:33:255,131,122,255,0,255	0/1:13,18,1:33:255,0,255,255,227,255
-chr21	39139981	chr21:39139981:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,28:31:255,72,0	1/1:0,20:20:255,59,0	0/1:10,18:32:252,0,98
-chr21	39143087	chr21:39143087:M	CTTCCCCTTCACCTTC	<2.8>	.	.	Motif=CTTCAC	GT:AD:DP:PL	0/1:18,18:36:255,0,255	0/1:11,13:24:250,0,200	0/1:19,25:44:255,0,255
-chr21	39149578	chr21:39149578:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,16,20:37:255,255,255,255,0,194	1/2:1,19,14:34:255,194,162,255,0,240	2/2:2,0,26:29:255,255,255,38,82,0
-chr21	39158201	chr21:39158201:M	AAAAAAAAAAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:30:0,88,255	0/0:29,1:33:0,78,255	0/1:18,9:28:84,0,252
-chr21	39158396	chr21:39158396:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:49,3,0	0/1:3,6:11:77,0,18	1/1:0,1:1:16,3,0
-chr21	39158840	chr21:39158840:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:9,0,19	0/1:1,2:3:24,0,8	0/1:8,3:11:19,0,104
-chr21	39166413	chr21:39166413:M	TTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:14:255,32,0	1/1:0,4:9:154,17,0	0/0:0,0:3:0,1,3
-chr21	39185296	chr21:39185296:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:137,0,16	1/1:0,2:3:71,9,0	1/1:0,1:3:56,9,0
-chr21	39185709	chr21:39185709:M	AAAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,24:37:255,255,255,0,255,255	0/2:20,1,24:46:255,255,255,0,255,255	1/2:0,23,26:49:255,255,255,255,0,255
-chr21	39195743	chr21:39195743:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:40:255,0,224	0/1:18,21:42:255,0,209	0/1:17,21:41:255,0,193
-chr21	39207452	chr21:39207452:M	ACACACACACACACACACACACACACACACACA	<20.5>,<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:14,0,3:20:31,74,255,0,255,255	0/2:6,0,10:16:231,236,255,0,155,125	1/1:0,8,0:10:237,27,0,219,18,209
-chr21	39208979	chr21:39208979:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:38:0,83,255	0/0:27,1:31:0,70,255	0/1:22,9:36:80,0,255
-chr21	39214870	chr21:39214870:M	TTTTTTTTTCCTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:99,0,99	0/1:13,14:28:163,0,146	1/1:1,16:18:255,35,0
-chr21	39217011	chr21:39217011:M	ATATATATATATATATATATATATAAATATATATATATATTTATATATATATATATATATATATATATATATAT	<15.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,0:5:20,20,19,5,5,0	2/2:0,0,0:1:0,0,0,0,0,0	1/2:0,6,12:20:255,255,206,122,0,67
-chr21	39217084	chr21:39217084:M	TTTTTTTTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:2,0:3:0,7,58	0/0:0,0:1:0,2,4	1/1:0,12:14:255,39,0
-chr21	39221155	chr21:39221155:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,16,164	0/0:8,1:14:0,20,160	0/1:7,4:13:42,0,96
-chr21	39238286	chr21:39238286:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:17:76,0,111	0/1:12,12:29:160,0,120	1/1:2,16:22:255,26,0
-chr21	39240901	chr21:39240901:M	TTTTTTTTTTTGTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,0:28:0,82,255	0/0:33,1:34:0,82,255	0/1:13,8:22:85,0,177
-chr21	39244922	chr21:39244922:M	ATATATATATATATATATATATAT	<9>,<14>	.	.	Motif=AT	GT:AD:DP:PL	0/2:14,0,14:31:255,255,255,0,255,255	0/0:9,0,0:11:0,30,255,30,255,255	1/2:0,13,4:18:255,105,66,255,0,255
-chr21	39245590	chr21:39245590:M	TTTTTTTTTTGGTTTTTTTTTTTTTTT	<25>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,4,11:23:174,96,255,0,61,70	0/2:19,1,12:32:124,156,255,0,255,233	1/2:0,10,11:21:255,163,133,174,0,115
-chr21	39248642	chr21:39248642:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<21>,<26>,<34>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,6,0:10:245,155,143,90,0,72,245,155,90,245	1/2:0,1,2,0:6:102,64,59,37,0,28,102,64,37,102	2/3:0,0,3,3:8:173,173,173,87,87,76,86,86,0,74
-chr21	39249916	chr21:39249916:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15>,<16>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,17,0,0:31:255,0,255,255,255,255,255,225,255,255	0/2:9,0,22,1:36:255,255,255,0,255,216,255,255,129,255	1/3:0,9,1,9:22:255,162,223,255,238,255,255,0,148,248
-chr21	39252250	chr21:39252250:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:10:0,2,197	0/1:13,3:16:31,0,255	0/1:8,4:13:70,0,182
-chr21	39257203	chr21:39257203:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:26:0,50,255	0/0:21,3:26:0,21,255	0/1:12,14:28:176,0,140
-chr21	39264429	chr21:39264429:M	AAAAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:16,0,9:26:95,158,255,0,255,210	0/2:16,0,6:24:54,101,255,0,255,202	1/2:0,18,12:36:255,211,241,255,0,255
-chr21	39268443	chr21:39268443:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8:15:109,0,55	0/1:7,16:24:211,0,48	0/1:7,14:24:204,0,53
-chr21	39272009	chr21:39272009:M	AAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7,0:20:69,0,180,108,235,255	0/1:8,5,0:15:43,0,115,73,151,255	1/2:3,6,4:14:116,9,34,29,0,102
-chr21	39272310	chr21:39272310:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,12:18:140,0,44	0/1:12,10:22:91,0,121	1/1:0,13:14:194,29,0
-chr21	39274298	chr21:39274298:M	AGAGAGCGAGAGAGAGAGAGAGAGAGAGA	<13.5>	.	.	Motif=AG	GT:AD:DP:PL	0/0:26,2:28:0,45,255	0/0:30,3:33:0,44,255	0/1:20,13:34:138,0,255
-chr21	39279639	chr21:39279639:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAA	<27>,<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0,0:7:0,21,178,20,130,114	0/2:6,0,3:9:23,49,224,0,98,73	0/1:1,6,1:9:145,0,15,134,0,145
-chr21	39286017	chr21:39286017:M	TTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:12:0,33,255	0/0:13,0:19:0,53,255	1/1:0,5:6:140,15,0
-chr21	39290491	chr21:39290491:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:11,1:13:0,20,186	0/1:12,7:19:63,0,149	0/1:10,2:13:6,0,138
-chr21	39292114	chr21:39292114:M	GTGGGGGGTGGGTGGG	<1.5>	.	.	Motif=GTGG	GT:AD:DP:PL	0/1:2,1:3:17,0,44	0/1:1,3:4:67,0,15	1/1:0,1:1:28,3,0
-chr21	39294655	chr21:39294655:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,1:16:0,29,241	0/0:16,1:19:0,36,255	0/1:13,7:20:63,0,169
-chr21	39299248	chr21:39299248:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,17:37:167,0,213	0/1:16,16:32:157,0,155	1/1:4,39:44:255,49,0
-chr21	39299260	chr21:39299260:M	ATATATATATAT	<5.5>	.	.	Motif=AT	GT:AD:DP:PL	0/0:21,7:31:0,12,55	0/0:22,10:32:0,9,50	1/1:0,25:30:129,49,0
-chr21	39299813	chr21:39299813:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,21:38:255,0,203	0/1:20,14:34:146,0,250	1/1:0,31:33:255,96,0
-chr21	39301894	chr21:39301894:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,3:35:0,47,255	0/0:27,0:30:0,84,255	0/1:25,17:42:182,0,255
-chr21	39302755	chr21:39302755:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:11:89,0,25	0/1:4,10:18:150,0,27	1/1:2,8:13:139,2,0
-chr21	39303520	chr21:39303520:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7:8:103,6,0	0/1:7,2:10:8,0,88	0/1:2,2:7:19,0,32
-chr21	39303823	chr21:39303823:M	AAAAAAAAAAAGAAAAAGAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:33,0:34:0,99,255	0/1:8,10:18:129,0,93
-chr21	39304142	chr21:39304142:M	AAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,14:18:255,0,50	0/1:2,11:15:254,0,21	1/1:0,17:21:255,56,0
-chr21	39304958	chr21:39304958:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:5:70,0,16	0/0:3,0:5:0,9,83	0/1:2,1:3:18,0,48
-chr21	39305861	chr21:39305861:M	AAAAAGAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/0:8,1:9:0,9,124	0/1:10,6:16:54,0,123	1/1:2,11:14:164,6,0
-chr21	39308482	chr21:39308482:M	AAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:4,0,5:9:62,74,177,0,70,45	0/2:3,1,2:7:25,12,89,0,39,39	1/2:0,10,3:14:255,44,11,178,0,143
-chr21	39309289	chr21:39309289:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,14:23:195,0,102	0/1:13,13:26:154,0,155	0/1:12,14:26:181,0,144
-chr21	39309825	chr21:39309825:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:58,0,58	0/1:1,2:4:34,0,5	0/1:6,3:13:25,0,97
-chr21	39310604	chr21:39310604:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:29,17:48:114,0,255	0/1:18,13:33:95,0,166	0/1:24,24:50:209,0,205
-chr21	39310614	chr21:39310614:M	ATTATTATTATT	<3.7>	.	.	Motif=ATT	GT:AD:DP:PL	0/0:31,3:35:0,59,255	0/0:22,3:25:0,32,232	1/1:0,5:6:57,11,0
-chr21	39313590	chr21:39313590:M	CGCCGCCGCCGCCGCCGCCGCCGCC	<7.3>,<9.3>	.	.	Motif=CGC	GT:AD:DP:PL	0/2:10,0,12:22:163,223,255,0,161,125	0/2:7,0,11:18:144,193,255,0,106,73	1/2:0,8,6:14:217,106,120,144,0,184
-chr21	39315748	chr21:39315748:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:20:109,0,147	0/1:16,18:34:219,0,183	1/1:0,45:46:255,135,0
-chr21	39320668	chr21:39320668:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,4:11:49,0,75	0/1:5,2:8:20,0,62	0/1:2,5:8:74,0,12
-chr21	39321449	chr21:39321449:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,8:25:87,0,208	0/1:15,6:24:47,0,213	1/1:2,20:23:255,31,0
-chr21	39325277	chr21:39325277:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:10:131,11,0	0/1:2,7:9:91,0,7	1/1:3,20:26:255,23,0
-chr21	39327502	chr21:39327502:M	TTTTTTTTGTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,16:29:255,0,224	0/1:23,18:42:255,0,255	1/1:0,49:51:255,152,0
-chr21	39327906	chr21:39327906:M	AATAAATAAATAAATAAATGAATAAATAAATAAATAAATAAAATTAAATAAA	<12>	.	.	Motif=AATA	GT:AD:DP:PL	0/0:7,1:8:0,4,115	0/0:8,0:8:0,24,145	1/1:0,18:18:255,53,0
-chr21	39328192	chr21:39328192:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,13:29:159,0,216	0/1:8,13:21:170,0,81	1/1:0,35:36:255,106,0
-chr21	39329517	chr21:39329517:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:12:71,0,70	0/1:9,6:17:71,0,102	1/1:1,12:14:199,23,0
-chr21	39329854	chr21:39329854:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:16:138,0,64	0/1:13,6:19:49,0,172	1/1:0,16:17:255,50,0
-chr21	39330931	chr21:39330931:M	AATAATAATAATAATA	<6.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:21,11:32:207,0,255	0/1:10,10:22:212,0,206	1/1:0,43:46:255,134,0
-chr21	39331427	chr21:39331427:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,3:11:23,0,69	0/1:6,3:10:20,0,66	1/1:0,5:5:78,14,0
-chr21	39333390	chr21:39333390:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:16:64,0,133	0/0:10,2:13:0,3,154	1/1:2,13:16:215,12,0
-chr21	39337021	chr21:39337021:M	TTTTTTCTTTTCTTTTCTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,15:41:145,0,255	0/1:11,10:23:111,0,129	1/1:1,19:21:255,44,0
-chr21	39344257	chr21:39344257:M	AAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:18:255,15,0	1/1:0,7:10:203,20,0	1/1:0,32:34:255,101,0
-chr21	39345110	chr21:39345110:M	CACACACACACACACACACACACACACAC	<12.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,15:30:255,0,255	0/1:14,7:21:127,0,255	1/1:0,29:31:255,92,0
-chr21	39356284	chr21:39356284:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,12:24:147,0,148	0/1:17,7:24:50,0,223	0/0:15,3:21:0,7,242
-chr21	39370422	chr21:39370422:M	ACACACACACACACACACACACACACACACACACA	<19.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:8,7:17:120,0,144	0/1:17,6:25:71,0,255	0/1:21,12:37:181,0,255
-chr21	39371147	chr21:39371147:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,7:16:79,0,116	0/1:15,6:22:49,0,193	1/1:3,25:31:255,33,0
-chr21	39374892	chr21:39374892:M	TCCCCTCCCCTCCACTTCTGTCCCCTCCCCTGCCCTCCACTTCCCTTTCCCCTCCCC	<11.6>	.	.	Motif=TCCCC	GT:AD:DP:PL	0/0:9,1:10:0,12,33	0/0:8,1:10:0,8,25	0/1:5,4:10:2,0,6
-chr21	39376103	chr21:39376103:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:40,0,5	.	0/0:1,0:1:0,3,17
-chr21	39384565	chr21:39384565:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,24:28:255,24,0	1/1:1,16:18:255,35,0	1/1:0,22:23:255,67,0
-chr21	39386850	chr21:39386850:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,61,0	1/1:0,34:36:255,97,0	1/1:2,26:29:255,49,0
-chr21	39395369	chr21:39395369:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,37:38:255,110,0	1/1:0,34:35:255,103,0	1/1:0,32:35:255,102,0
-chr21	39396686	chr21:39396686:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,10:10:179,29,0	1/1:2,11:15:173,9,0	1/1:0,3:4:63,11,0
-chr21	39403616	chr21:39403616:M	TATTTTTATTTTTATTTTTTTTTT	<3.8>	.	.	Motif=TATTTT	GT:AD:DP:PL	1/1:0,23:23:255,69,0	1/1:0,24:25:255,73,0	1/1:0,26:26:255,78,0
-chr21	39404751	chr21:39404751:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:5:86,15,0	1/1:1,4:6:58,1,0	1/1:0,2:2:34,6,0
-chr21	39414707	chr21:39414707:M	TCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT	<17.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,15:20:245,54,0	0/1:7,8:19:84,0,49	1/1:0,18:21:255,57,0
-chr21	39414743	chr21:39414743:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTG	<24>,<25>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,10,6:17:255,72,22,125,0,78	1/2:0,7,5:13:255,59,21,88,0,53	1/2:0,4,10:15:255,116,72,57,0,15
-chr21	39419524	chr21:39419524:M	AAAAAAAAAAAAGAAAAAAGAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,17:24:214,0,4	1/1:0,22:22:255,64,0	1/1:1,28:31:255,68,0
-chr21	39428579	chr21:39428579:M	TATATATATATATATATATAT	<8>,<9.5>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,2:6:70,20,38,48,0,39	1/2:0,3,5:8:119,50,98,70,0,51	0/0:0,0,0:3:0,0,0,0,0,0
-chr21	39433928	chr21:39433928:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:9:116,8,0	0/1:1,2:4:32,0,5	0/1:2,6:9:78,0,19
-chr21	39446168	chr21:39446168:M	TTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:36:255,106,0	1/1:0,42:45:255,134,0	1/1:0,33:35:255,104,0
-chr21	39447417	chr21:39447417:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:15:40,0,84	0/0:4,0:6:0,12,60	0/0:4,0:6:0,14,76
-chr21	39473885	chr21:39473885:M	AAAAAAAAAAACAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,26:28:255,81,0	1/1:0,22:23:255,68,0	1/1:2,30:33:255,44,0
-chr21	39474891	chr21:39474891:M	GTGTGTGTGTGTGTGTG	<9.5>	.	.	Motif=GT	GT:AD:DP:PL	1/1:2,40:42:255,86,0	1/1:0,33:33:255,97,0	1/1:2,31:33:255,60,0
-chr21	39485682	chr21:39485682:M	TTTTCTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,10:11:188,32,0	0/1:3,7:11:95,0,19	1/1:0,13:13:227,38,0
-chr21	39490740	chr21:39490740:M	TTTTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:36:255,104,0	1/1:0,40:44:255,130,0	1/1:0,45:45:255,135,0
-chr21	39491159	chr21:39491159:M	TTTATTTATTTATTTATTTATTTTATTTTTTATTT	<9.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,26:42:117,4,0	0/1:0,17:32:64,0,18	1/1:0,30:44:161,23,0
-chr21	39492467	chr21:39492467:M	TATATATATATATATA	<4>,<7>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,2,3:5:73,34,64,47,0,38	1/2:0,3,9:12:146,99,203,69,0,44	1/2:0,6,3:9:168,33,54,141,0,131
-chr21	39492482	chr21:39492482:M	ACACACACACACACACACCACA	<10>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,28:30:255,83,0	1/1:1,27:32:255,76,0	1/1:0,37:38:255,105,0
-chr21	39494223	chr21:39494223:M	TCTTCTTCCTCTTCTTCTTCTTCTTCTTCTT	<8.3>,<9.3>	.	.	Motif=TCT	GT:AD:DP:PL	2/2:0,1,39:44:255,255,255,119,63,0	2/2:0,1,29:34:255,255,255,91,36,0	1/2:0,19,21:49:255,209,129,255,0,176
-chr21	39494252	chr21:39494252:M	TTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,36:42:255,114,0	1/1:0,28:32:255,84,0	1/1:0,35:41:255,105,0
-chr21	39496507	chr21:39496507:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,7:11:239,27,0	1/1:0,4:7:163,21,0	1/1:0,6:8:193,21,0
-chr21	39499247	chr21:39499247:M	CTATCTATCATCTGTCTATCTGTCTATCTATCTAT	<11.8>,<14.8>	.	.	Motif=CTAT	GT:AD:DP:PL	1/2:0,11,14:28:255,255,255,255,0,226	2/2:0,0,15:18:255,255,255,48,35,0	1/2:0,15,8:24:255,198,154,255,0,255
-chr21	39502986	chr21:39502986:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:30:255,78,0	1/1:0,29:29:255,85,0	1/1:1,29:31:255,64,0
-chr21	39509472	chr21:39509472:M	TTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:14:255,39,0	1/1:0,7:9:255,27,0	1/1:0,9:11:255,30,0
-chr21	39515693	chr21:39515693:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,51:51:255,150,0	1/1:1,56:57:255,150,0
-chr21	39532565	chr21:39532565:M	AAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:231,6,0	1/1:1,11:13:255,13,0	1/1:0,15:16:255,45,0
-chr21	39533114	chr21:39533114:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:27:106,0,218	0/1:11,10:23:111,0,138	1/1:1,24:25:255,55,0
-chr21	39533987	chr21:39533987:M	ATTTTTTATTTTTTATTTTATTTATTTTAATTTTATTTATTT	<11.5>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,5:16:42,0,99	0/1:5,3:8:19,0,47	1/1:0,8:9:115,23,0
-chr21	39537149	chr21:39537149:M	GAGAGAGAGAGAGAGAGAGA	<12>	.	.	Motif=GA	GT:AD:DP:PL	0/1:21,21:44:255,0,255	0/1:22,13:36:247,0,255	1/1:0,34:34:255,102,0
-chr21	39541684	chr21:39541684:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,16:28:223,0,147	0/1:19,22:41:255,0,222	1/1:0,50:50:255,148,0
-chr21	39541723	chr21:39541723:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:25:181,0,130	0/1:11,10:23:127,0,135	1/1:4,29:34:255,28,0
-chr21	39541891	chr21:39541891:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:25:181,0,255	0/1:11,2:15:15,0,255	1/1:1,18:19:255,29,0
-chr21	39549254	chr21:39549254:M	AAAAAAAAAAAATAATAAAACAAGAAAACAAACAAACAAAAAAA	<48>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,9:20:180,0,196	0/1:15,6:22:95,0,255	1/1:0,15:16:255,47,0
-chr21	39550241	chr21:39550241:M	TTTTTTTTTAATTTTATTTTA	<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/1:15,15:31:255,0,255	0/1:9,14:23:255,0,176	1/1:0,34:35:255,104,0
-chr21	39554938	chr21:39554938:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:3:81,9,0,67,9,60	1/1:0,1,0:1:28,3,0,22,3,20	1/2:0,1,5:6:142,95,82,20,0,3
-chr21	39554968	chr21:39554968:M	ATATATATATATATATATATATAAAATATATATATATATATAAAATATATATATATATATATTTTATATATATATATATATATA	<9>,<9.5>,<10.5>	.	.	Motif=AT	GT:AD:DP:PL	1/3:0,4,0,3:7:186,57,37,65,34,44,76,0,24,56	1/3:0,1,0,2:3:72,35,28,31,23,23,19,0,6,10	2/3:0,1,7,7:18:255,152,103,94,55,42,126,18,0,80
-chr21	39555174	chr21:39555174:M	TTTTTCTTTCTTTTTCTTTTTTTTTTTTTTTT	<29>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,10:13:255,0,47	0/1:2,6:9:171,0,28	1/1:0,19:19:255,57,0
-chr21	39555355	chr21:39555355:M	TTTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,13:26:255,0,231	0/1:5,12:18:255,0,83	1/1:0,32:35:255,99,0
-chr21	39561125	chr21:39561125:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,17:29:234,0,139	0/1:18,22:41:255,0,209	1/1:0,43:43:255,127,0
-chr21	39565197	chr21:39565197:M	TTTTTTTTTTTTTCTTTTTCTTTTT	<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,9,0:14:225,0,104,237,92,255	0/1:8,13,0:24:255,0,171,255,145,255	1/2:1,15,18:36:255,255,255,255,0,255
-chr21	39565386	chr21:39565386:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGT	<25.5>,<26.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:4,1,7:14:130,67,172,0,98,80	0/2:7,3,7:19:148,43,218,0,138,130	1/2:0,5,14:20:255,162,107,72,0,14
-chr21	39565610	chr21:39565610:M	TTTTTTTTTCTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,3:17:26,0,170	0/1:12,2:16:12,0,161	1/1:1,5:8:84,3,0
-chr21	39568414	chr21:39568414:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,6:14:133,0,146	0/1:6,11:21:239,0,134	1/1:0,9:10:251,29,0
-chr21	39570292	chr21:39570292:M	TTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,21:39:255,0,255	0/1:22,25:50:255,0,255	1/1:0,38:40:255,119,0
-chr21	39571324	chr21:39571324:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<20.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:1,10,10:21:255,159,221,159,0,215	1/2:1,7,7:15:179,102,152,102,0,150	1/1:0,33,0:35:255,100,0,255,102,255
-chr21	39573635	chr21:39573635:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<22>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,10:19:255,174,121,133,0,103	0/1:10,10,0:21:107,0,119,140,176,255	0/2:5,2,13:22:255,192,239,0,72,104
-chr21	39575782	chr21:39575782:M	ACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:18,16:36:255,0,255	0/1:8,13:23:243,0,125	0/1:22,9:32:119,0,255
-chr21	39584122	chr21:39584122:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:12:74,0,185	0/1:5,4:9:81,0,109	1/1:0,13:13:255,39,0
-chr21	39589605	chr21:39589605:M	AAAAAAAATAAATAAATAAATAAAATAAAAAAAAAAAAAAACAAAAAA	<46>,<47>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,7:19:255,110,74,219,0,167	1/2:0,6,4:10:208,59,41,103,0,76	1/1:0,18,0:19:255,57,0,255,56,255
-chr21	39591584	chr21:39591584:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,16:33:205,0,214	0/1:17,16:34:195,0,203	0/0:35,1:37:0,82,255
-chr21	39624852	chr21:39624852:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,19:38:248,0,249	0/1:19,21:41:255,0,220	0/0:29,0:29:0,86,255
-chr21	39642874	chr21:39642874:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,16:17:255,32,0	0/1:1,7:9:93,0,2	0/0:6,0:7:0,20,116
-chr21	39643052	chr21:39643052:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:29:190,0,172	0/1:20,11:32:108,0,254	0/0:35,3:38:0,58,255
-chr21	39643418	chr21:39643418:M	AAAAAAAAAAAAAAAAGAAAAAGAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:66,0,92	0/1:12,8:22:87,0,139	0/0:18,0:19:0,53,255
-chr21	39657655	chr21:39657655:M	ATCTATCTGTCTGTCTATCTATCTATCTGTCTA	<7.2>	.	.	Motif=ATCT	GT:AD:DP:PL	1/1:0,32:32:255,95,0	0/1:16,11:27:118,0,208	1/1:0,37:37:255,109,0
-chr21	39670212	chr21:39670212:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<13.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,16:31:206,0,188	0/0:31,0:34:0,98,255	0/1:16,16:33:193,0,202
-chr21	39677481	chr21:39677481:M	TGTTTTTTGTTTGTTTGTTTGTTT	<5>	.	.	Motif=TGTT	GT:AD:DP:PL	0/0:36,0:36:0,107,255	0/1:18,11:29:113,0,241	0/1:20,15:35:178,0,255
-chr21	39679809	chr21:39679809:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<25>	.	.	Motif=GA	GT:AD:DP:PL	0/1:1,0:2:9,0,20	1/1:0,1:1:28,3,0	1/1:0,6:13:244,34,0
-chr21	39682187	chr21:39682187:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:28:0,76,255	0/1:16,14:34:165,0,199	0/1:18,10:29:92,0,246
-chr21	39682705	chr21:39682705:M	AAACAAACAAACAAACAAACAAACAAACA	<6.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/0:35,0:35:0,104,255	0/1:13,20:33:255,0,139	0/1:19,15:34:182,0,255
-chr21	39689801	chr21:39689801:M	TATATATATATATATATATATATATATATATATATA	<16>,<19>	.	.	Motif=TA	GT:AD:DP:PL	1/2:1,11,4:16:255,45,79,253,0,255	2/2:0,0,2:2:29,35,57,6,6,0	0/1:3,4,1:9:83,0,68,85,29,124
-chr21	39691888	chr21:39691888:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,3:14:14,0,151	1/1:2,12:14:172,7,0	0/1:10,4:16:45,0,130
-chr21	39697558	chr21:39697558:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,2:3:23,0,7	0/1:4,3:8:23,0,48	0/0:5,1:6:0,2,63
-chr21	39700601	chr21:39700601:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:43,0:44:0,129,255	0/1:20,21:43:247,0,250	0/1:22,21:44:255,0,255
-chr21	39700938	chr21:39700938:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:25:0,72,255	0/1:13,6:22:41,0,179	0/0:17,3:20:0,6,245
-chr21	39701615	chr21:39701615:M	AAAAAAAAAAAGAAAGAAAAAAAAGAAAAGAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,3:31:0,35,255	0/1:11,13:24:159,0,124	0/1:13,10:23:114,0,169
-chr21	39705825	chr21:39705825:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,1:9:1,0,89	0/1:8,8:19:111,0,77	0/1:2,4:6:50,0,16
-chr21	39715037	chr21:39715037:M	CCTTTCCTTTCCTTTTCTTTCTTTC	<4>	.	.	Motif=CCTTT	GT:AD:DP:PL	0/0:30,0:30:0,86,255	0/1:23,20:43:177,0,216	0/1:17,22:42:229,0,140
-chr21	39715050	chr21:39715050:M	TTTCTTTCTTTCGTTCTTTCTTTCTTTTCTTTCTTTCTCATCTCCCTTCCCTTCTCTTCCTTTCTTTCTTTTCTTTTCTTTCTTT	<20>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:9,0:10:0,26,145	0/1:3,2:6:25,0,31	0/1:2,5:10:68,0,9
-chr21	39721674	chr21:39721674:M	CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	<10.5>,<12.5>	.	.	Motif=CCTT	GT:AD:DP:PL	0/2:8,0,4:12:40,74,255,0,148,115	0/1:8,11,0:19:255,0,181,255,140,255	1/2:0,10,6:16:255,108,126,255,0,242
-chr21	39724068	chr21:39724068:M	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT	<9>,<10>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,23,0:23:255,69,0,255,68,255	1/2:0,7,2:9:240,37,10,126,0,101	1/2:0,13,9:22:255,168,105,243,0,181
-chr21	39734423	chr21:39734423:M	AAAAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,7:13:160,63,125,86,0,66	1/2:2,4,5:11:105,31,102,55,0,49	0/2:10,2,4:18:12,7,255,0,76,70
-chr21	39734440	chr21:39734440:M	ACACACACACACACACACACACACACACACACACAC	<17>,<21>	.	.	Motif=AC	GT:AD:DP:PL	0/0:19,3,0:22:0,25,185,66,249,255	0/1:13,5,0:19:8,0,98,48,137,255	0/2:6,0,11:21:255,255,255,0,69,96
-chr21	39736044	chr21:39736044:M	CTCACTCTCACT	<1.8>	.	.	Motif=CTCACT	GT:AD:DP:PL	0/0:35,0:36:0,105,255	0/1:13,19:32:255,0,242	0/0:39,0:39:0,117,255
-chr21	39745057	chr21:39745057:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,18:33:255,255,246,255,0,189	0/1:27,23,1:52:255,0,255,255,255,255	2/2:1,2,43:46:255,255,255,117,98,0
-chr21	39747941	chr21:39747941:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:33,1:36:0,87,255	0/1:21,14:36:138,0,255	0/0:19,0:21:0,61,255
-chr21	39749214	chr21:39749214:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,21:25:255,65,0	0/1:11,7:21:134,0,247	1/1:0,29:30:255,87,0
-chr21	39750511	chr21:39750511:M	AAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:129,15,0	0/1:14,1:21:14,0,255	1/1:0,7:10:211,24,0
-chr21	39753742	chr21:39753742:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:43:255,127,0	0/1:15,25:40:255,0,154	1/1:0,56:56:255,165,0
-chr21	39753921	chr21:39753921:M	TTTTTTTGTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,31:32:255,76,0	0/1:23,18:41:203,0,255	1/1:0,48:49:255,144,0
-chr21	39755587	chr21:39755587:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,6:16:62,0,136	0/1:11,11:22:126,0,127	0/1:20,4:27:2,0,255
-chr21	39756090	chr21:39756090:M	CAAACAAACAAACAAACAAACAAACAAACAAAC	<5.2>,<6.2>,<7.2>	.	.	Motif=CAAA	GT:AD:DP:PL	1/2:0,16,15,0:31:255,255,203,255,0,223,255,251,255,255	2/3:0,0,21,12:33:255,255,255,187,218,124,255,255,0,255	1/1:0,37,0,0:37:255,111,0,255,109,255,255,111,255,255
-chr21	39757580	chr21:39757580:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:18,0,124	0/0:15,3:18:0,2,202	0/1:12,4:18:27,0,166
-chr21	39760579	chr21:39760579:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,23:24:255,52,0	0/1:11,13:25:168,0,122	1/1:0,39:40:255,117,0
-chr21	39773473	chr21:39773473:M	CTTTTCTTTTTTTTTC	<5.6>	.	.	Motif=CTTTT	GT:AD:DP:PL	1/1:0,32:33:255,98,0	0/1:13,17:31:255,0,255	1/1:0,43:44:255,132,0
-chr21	39787553	chr21:39787553:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,7:10:118,13,0	0/1:2,5:7:57,0,11	1/1:0,12:12:189,35,0
-chr21	39797219	chr21:39797219:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:9:161,26,0	0/1:2,6:8:79,0,11	0/1:2,7:14:118,0,15
-chr21	39803224	chr21:39803224:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,2:26:0,40,255	0/1:9,12:23:150,0,99	0/0:39,1:41:0,102,255
-chr21	39806269	chr21:39806269:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20,0:22:255,29,0,255,64,255	1/2:0,9,10:19:255,168,115,128,0,98	1/1:0,14,0:14:246,41,0,246,41,246
-chr21	39807319	chr21:39807319:M	CACACACACACACACACACACACACACACACACACACGCACACACAC	<19.5>,<21.5>,<25.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,13,0,6,0:21:255,164,137,255,178,255,255,0,255,255,255,116,255,255,255	1/2:0,14,8,0,0:22:255,210,168,255,0,255,255,217,255,255,255,217,255,255,255	3/4:0,0,0,7,4:14:255,255,255,255,255,255,62,70,70,29,121,152,152,0,119
-chr21	39809977	chr21:39809977:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:62,11,0	0/1:1,1:2:11,0,11	0/1:4,6:10:72,0,38
-chr21	39816411	chr21:39816411:M	GAGAGACAGAGAGAGAGAGGAGAG	<14.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:13,12:27:203,0,228	0/1:10,7:19:110,0,176	1/1:1,26:28:255,49,0
-chr21	39816429	chr21:39816429:M	GGAGAGGAGGGGAGGGGAGGGAAGGG	<6.2>	.	.	Motif=GGAGG	GT:AD:DP:PL	0/1:13,17:30:224,0,150	0/1:14,7:21:60,0,181	1/1:0,28:29:255,83,0
-chr21	39820810	chr21:39820810:M	TTATTTTATTTTATTTTTTTT	<4>	.	.	Motif=TTATT	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,27:27:255,81,0	1/1:0,29:29:255,87,0
-chr21	39823963	chr21:39823963:M	TATTTATTTATTTATTTATTTATTTATTTATT	<12>,<13>	.	.	Motif=TATT	GT:AD:DP:PL	0/2:6,0,11:17:255,210,255,0,160,128	0/1:14,8,0:22:172,0,255,144,255,255	2/2:0,0,15:15:255,255,255,45,44,0
-chr21	39826429	chr21:39826429:M	TATATATATATTTATCATATATGTATGACATATATATATA	<22>	.	.	Motif=TA	GT:AD:DP:PL	0/1:14,11:26:184,0,255	0/1:17,8:25:111,0,255	0/0:36,0:36:0,108,255
-chr21	39827940	chr21:39827940:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,28:53:255,0,255	0/1:16,15:32:171,0,198	0/0:28,1:31:0,72,255
-chr21	39830454	chr21:39830454:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:28,26:54:255,0,255	0/1:20,23:44:255,0,235	0/0:46,2:48:0,105,255
-chr21	39834719	chr21:39834719:M	AGAGGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGCGAGAGAG	<15.5>,<38.5>	.	.	Motif=AG	GT:AD:DP:PL	1/2:0,15,6:23:255,174,129,255,0,255	1/1:0,13,0:19:255,17,0,255,42,255	2/2:0,0,1:5:61,61,61,9,9,0
-chr21	39837403	chr21:39837403:M	TCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:31,26:57:255,0,255	0/1:21,14:35:255,0,255	0/0:48,0:48:0,144,255
-chr21	39844867	chr21:39844867:M	AAAAAAAAAAAAAAAAAAAA	<19>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,5:15:113,138,222,0,88,119	0/1:5,4,0:11:38,0,42,64,69,215	0/2:2,1,10:14:215,222,255,0,17,27
-chr21	39853719	chr21:39853719:M	TTTTTTTCTTTTCTTTTGTTTTTTTCTTCTTCTTTTTTTTTTTTTTTTT	<47>,<48>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,3:8:32,46,147,0,76,58	0/0:5,0,0:5:0,15,136,15,99,86	1/2:1,8,3:12:224,28,29,123,0,108
-chr21	39867169	chr21:39867169:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:26:135,0,178	0/1:12,8:24:94,0,152	1/1:1,30:32:255,76,0
-chr21	39874662	chr21:39874662:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,43:46:255,134,0	1/1:0,38:40:255,114,0	1/1:0,32:35:255,99,0
-chr21	39878003	chr21:39878003:M	GAGAGAGAGAGAGAGA	<9>	.	.	Motif=GA	GT:AD:DP:PL	0/1:16,17:33:224,0,208	0/1:22,24:46:255,0,255	0/0:42,0:42:0,124,255
-chr21	39878973	chr21:39878973:M	TTTTCTTTTCTTTCCTTTTTCTTTTTTTTTTTT	<6.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:26,0:29:0,83,255	0/1:6,10:16:155,0,73	0/0:27,1:29:0,63,255
-chr21	39884801	chr21:39884801:M	AGAGAGAGAGAGAGAGAGAGAGACAGAGA	<16.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:12,15:30:255,0,255	0/1:11,11:26:255,0,235	0/0:24,0:26:0,77,255
-chr21	39887339	chr21:39887339:M	TTTTTTTTTGTTTTTTGGTTTTTTTTTTTTT	<32>,<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,14,2:29:178,0,135,169,180,255	0/2:15,0,13:29:255,219,255,0,243,255	1/1:4,25,0:29:255,17,0,255,84,255
-chr21	39889412	chr21:39889412:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,4:9:240,69,43,86,0,61	1/2:0,2,2:5:92,24,22,24,0,21	1/2:0,5,3:8:215,51,28,85,0,62
-chr21	39890523	chr21:39890523:M	TTTTTTTTTTTTT	<12>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,11:26:255,203,235,255,0,255	0/1:20,18,0:39:220,0,244,255,255,255	1/2:0,8,14:22:255,253,255,145,0,168
-chr21	39897386	chr21:39897386:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:12:0,17,171	0/1:5,5:10:55,0,55	0/0:9,0:11:0,32,176
-chr21	39903868	chr21:39903868:M	AAAAAAAACAAAAAAAAAAAAAAAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,18:20:255,53,0	1/1:1,15:16:231,30,0	0/1:1,1:2:11,0,11
-chr21	39905254	chr21:39905254:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:27,23,0:50:255,0,255,255,255,255	1/2:0,22,17:40:255,255,255,255,0,255	0/0:44,0,0:44:0,130,255,130,255,255
-chr21	39907797	chr21:39907797:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,19:32:255,0,148	0/0:40,1:41:0,103,255	0/1:11,21:32:255,0,106
-chr21	39912313	chr21:39912313:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,12:33:123,0,255	0/0:26,3:33:0,43,255	0/1:23,12:35:112,0,255
-chr21	39914574	chr21:39914574:M	AAAAAAAAAAAAAAGAAAAAAAAAA	<28>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8,1:9:245,27,0,147,9,122	1/2:0,1,3:6:125,50,33,36,0,24	1/1:0,3,0:5:111,14,0,82,14,74
-chr21	39915230	chr21:39915230:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:42:255,0,232	0/1:22,10:32:83,0,255	0/1:26,14:42:143,0,255
-chr21	39932406	chr21:39932406:M	TTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,23,14:37:255,249,144,255,0,255	0/1:18,18,1:38:210,0,210,241,255,255	2/2:0,0,35:37:255,255,255,111,108,0
-chr21	39933640	chr21:39933640:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,14:16:207,13,0	1/1:1,8:9:115,10,0	1/1:0,20:21:255,61,0
-chr21	39942651	chr21:39942651:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:24:255,52,0	0/1:6,13:23:186,0,46	0/1:14,7:22:67,0,178
-chr21	39955558	chr21:39955558:M	TTTTTTTTTTGTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/0:25,0:25:0,75,255	0/1:10,18:29:255,0,189
-chr21	39956182	chr21:39956182:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1,0:40:0,99,255,117,255,255	0/1:16,15,0:32:173,0,202,224,255,255	0/2:23,2,22:49:255,255,255,0,255,255
-chr21	39962325	chr21:39962325:M	CTTTTCTTTCTTTCTTTTCTTTTCTTTCTTTCTTTCTTTTTTCTTTCTTTTTTTTTTTTTTTT	<27>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:2,6:14:49,0,96	0/1:4,4:8:36,0,91	0/1:1,8:9:93,0,3
-chr21	39965557	chr21:39965557:M	CACACACAAGCACACACATGCACACACACACACACACAC	<18.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:25,1,0:26:0,58,255,78,255,255	0/2:7,1,18:26:255,255,255,0,106,135	0/1:13,19,0:35:255,0,156,255,241,255
-chr21	39971360	chr21:39971360:M	AAAAATAAAAAT	<1.8>	.	.	Motif=AAAAAT	GT:AD:DP:PL	1/1:0,30:30:255,90,0	1/1:0,37:39:255,113,0	1/1:0,34:36:255,105,0
-chr21	39971606	chr21:39971606:M	TTCTTTTCTTTTTTTT	<3.4>	.	.	Motif=TTCTT	GT:AD:DP:PL	0/1:24,23:47:255,0,255	0/0:50,0:50:0,150,255	0/1:21,19:40:255,0,255
-chr21	39973795	chr21:39973795:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<20.5>,<23.5>,<24.5>	.	.	Motif=GT	GT:AD:DP:PL	2/4:0,0,13,0,9:22:255,255,255,254,255,222,255,255,160,255,255,255,0,255,255	1/2:0,18,12,0,0:31:255,255,255,255,0,255,255,255,255,255,255,255,255,255,255	3/4:2,0,0,6,12:20:255,255,255,255,255,255,174,211,211,153,54,127,126,0,72
-chr21	39977704	chr21:39977704:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:202,0,201	0/1:9,10:19:119,0,102	1/1:2,25:28:255,46,0
-chr21	39983863	chr21:39983863:M	TCCCTCCCTCCCTCCCTCCCTCCCT	<7.2>,<8.2>	.	.	Motif=TCCC	GT:AD:DP:PL	1/2:0,9,4:13:184,53,17,95,0,83	1/2:1,6,3:11:98,13,8,36,0,73	1/1:1,16,3:22:210,22,0,149,22,208
-chr21	39984743	chr21:39984743:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<16>,<18>	.	.	Motif=GT	GT:AD:DP:PL	1/2:1,5,10,0:16:255,255,255,74,0,112,255,255,143,255	1/3:0,5,0,11:21:255,255,255,255,255,255,96,0,124,102	2/2:0,0,14,0:15:255,255,255,45,42,0,255,255,45,255
-chr21	39985947	chr21:39985947:M	CACACTACACACACACACTCACATATAACACAAACACACACCAAACACACAC	<25>	.	.	Motif=CA	GT:AD:DP:PL	0/1:9,6:15:72,0,126	0/1:7,8:15:100,0,81	1/1:0,9:9:168,27,0
-chr21	39986238	chr21:39986238:M	CACACACACACACACACACACACACACACACACACAC	<15.5>,<16.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,10,0:16:255,0,130,155,151,255	0/2:7,1,7:19:185,117,255,0,160,134	1/1:0,20,0:21:255,63,0,255,61,255
-chr21	39993395	chr21:39993395:M	TTTTATTTTACTTTTTTTTTTTT	<4.4>,<4.8>	.	.	Motif=TTTTA	GT:AD:DP:PL	0/2:8,0,14:22:220,255,255,0,140,98	1/2:0,20,18:41:255,255,255,255,0,255	0/1:15,16,0:31:234,0,214,255,255,255
-chr21	40003928	chr21:40003928:M	TTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:43,0,73	1/1:0,1:4:26,2,0	1/1:0,8:9:229,24,0
-chr21	40005205	chr21:40005205:M	AAAAAAAAAAAAAAAAAAAAAAACCAAAAAACAAAAAAAAAAAA	<45>,<46>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,2,1:3:50,16,8,28,0,25	1/2:0,3,4:7:133,64,45,41,0,29	0/1:1,2,0:3:25,0,8,28,16,51
-chr21	40012908	chr21:40012908:M	TTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,24:25:255,255,255,75,74,0	2/2:0,3,27:33:255,255,255,89,43,0	1/2:2,17,16:35:255,251,188,224,0,227
-chr21	40015418	chr21:40015418:M	TTTTTTTTTTTTTTCTTTTTT	<19>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,18,4:23:255,103,47,255,0,255	1/2:0,18,13:34:255,255,255,255,0,255	1/1:0,30,0:32:255,90,0,255,93,255
-chr21	40017565	chr21:40017565:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,28:30:255,85,0	1/1:0,21:21:255,62,0	0/1:12,23:38:255,0,126
-chr21	40020531	chr21:40020531:M	GAGAGAGAGAGAGAGAGGAGAGAGA	<14.5>	.	.	Motif=GA	GT:AD:DP:PL	0/1:8,10:19:190,0,144	0/1:9,6:17:96,0,176	0/0:17,0:17:0,51,255
-chr21	40022781	chr21:40022781:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,17:32:228,0,189	0/1:25,25:52:255,0,255	0/0:60,0:61:0,179,255
-chr21	40029427	chr21:40029427:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,14:33:172,0,215	0/0:29,0:31:0,90,255	1/1:3,18:22:255,11,0
-chr21	40039299	chr21:40039299:M	AAATAAAAATCAAAAAAAAAA	<3.3>	.	.	Motif=AAATAA	GT:AD:DP:PL	0/1:11,15:27:228,0,151	0/1:14,18:32:255,0,192	0/0:37,0:37:0,110,255
-chr21	40040928	chr21:40040928:M	AAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:43,0:45:0,129,255	0/1:17,15:33:255,0,255	0/0:39,0:42:0,120,255
-chr21	40050488	chr21:40050488:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,10:21:125,0,144	0/0:24,1:27:0,61,255	1/1:0,21:21:255,62,0
-chr21	40061570	chr21:40061570:M	AAAAAAAAAAAAAAAAGAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,8:17:102,0,87	0/0:19,0:23:0,66,255	1/1:0,13:13:227,38,0
-chr21	40064117	chr21:40064117:M	TATATATATATATATAT	<9.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,11:36:105,0,255	0/1:17,13:30:145,0,216	1/1:0,29:29:255,86,0
-chr21	40067726	chr21:40067726:M	TCCCTCCCTCCCCTCATTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT	<7.2>	.	.	Motif=TCCC	GT:AD:DP:PL	1/1:0,6:8:255,24,0	0/0:0,0:2:0,5,29	1/1:0,7:8:255,24,0
-chr21	40069086	chr21:40069086:M	AGAAAAAAAAAAAAAAGAAAAAGAAAAGAAAGAAAA	<7.4>	.	.	Motif=AGAAA	GT:AD:DP:PL	0/1:8,9:19:131,0,116	0/0:14,0:15:0,43,255	0/1:10,7:19:102,0,149
-chr21	40070396	chr21:40070396:M	AAAAGAAAAGAAAAGAAAAGAAAAAGAAAGAGAAAGAAAGACAAAGAGAAAGAAA	<8.3>	.	.	Motif=AAAAGA	GT:AD:DP:PL	0/1:3,7:19:113,0,22	0/0:22,0:35:0,41,255	1/1:0,17:24:255,52,0
-chr21	40082695	chr21:40082695:M	AAAAGAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,22,13:36:255,204,136,255,0,255	0/2:17,0,12:30:122,176,255,0,255,220	1/2:0,14,13:28:255,198,153,255,0,180
-chr21	40084502	chr21:40084502:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACA	<13.5>,<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:8,1,18:28:255,255,255,0,213,175	2/2:1,0,17:20:255,255,255,2,50,0	0/1:5,18,0:24:255,0,96,255,149,255
-chr21	40097532	chr21:40097532:M	TAAACATAAACATA	<22.5>	.	.	Motif=TAAACA	GT:AD:DP:PL	0/0:34,9:43:0,20,255	0/0:44,4:48:0,96,255	0/1:42,19:61:47,0,255
-chr21	40097955	chr21:40097955:M	AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	<11.8>,<33.8>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:6,8,3:17:181,0,126,171,121,255	0/2:9,0,3:14:1,28,255,0,228,219	1/2:0,10,13:23:255,123,93,249,0,214
-chr21	40098861	chr21:40098861:M	CACCTCACCTC	<27>	.	.	Motif=CACCT	GT:AD:DP:PL	0/0:48,9:57:0,62,255	0/0:36,4:40:0,72,255	0/1:40,18:58:44,0,255
-chr21	40100636	chr21:40100636:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,8:27:62,0,255	0/0:15,2:18:0,10,209	0/0:25,3:30:0,32,255
-chr21	40106894	chr21:40106894:M	TATTTTATTTTTTTT	<3.2>	.	.	Motif=TATTT	GT:AD:DP:PL	1/1:1,15:17:255,28,0	1/1:0,24:27:255,77,0	.
-chr21	40117949	chr21:40117949:M	ACACACACACACACACACACACATACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,12:25:153,0,173	1/1:0,36:39:255,113,0	0/0:39,2:41:0,84,255
-chr21	40133602	chr21:40133602:M	AAAAAAAACAAAAAACAAAAAAAAAGAAAAGAAAGAAGAAAAAA	<43>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,10:20:135,0,132	1/1:0,26:26:255,77,0	0/0:27,0:27:0,80,255
-chr21	40137179	chr21:40137179:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:11:93,0,39	0/0:15,3:18:0,2,204	1/1:1,15:21:255,43,0
-chr21	40137595	chr21:40137595:M	ACACACACACACACACACACACACACACACACACACACACACACACACACA	<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,24:25:255,255,255,71,64,0	1/2:0,18,10:29:255,145,88,255,0,238	2/2:0,2,22:25:255,255,255,70,35,0
-chr21	40141976	chr21:40141976:M	ACACACACACACACACACACACAC	<20>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6:22:102,0,255	1/1:0,21:22:255,66,0	0/0:38,0:39:0,117,255
-chr21	40145977	chr21:40145977:M	TGTATGTATGTATACATGTACATATGTATGTAT	<9.2>	.	.	Motif=TGTA	GT:AD:DP:PL	0/1:17,18:35:150,0,134	1/1:0,22:26:255,62,0	0/1:12,14:31:118,0,89
-chr21	40152117	chr21:40152117:M	AAAAAAAAAAACACAAAAAAAACAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,93,255	0/0:35,0:36:0,105,255	0/1:12,12:26:254,0,255
-chr21	40156054	chr21:40156054:M	TATATATAATATAATTTATATTATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:5,18:23:255,0,68	0/0:15,0:15:0,45,255	0/1:9,21:30:255,0,156
-chr21	40163071	chr21:40163071:M	ACACACACACACACACACACACACACACACACACACA	<19.5>,<22.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/3:11,0,0,4:18:71,106,255,60,255,255,0,204,255,255	0/2:10,0,8,1:20:201,233,255,0,178,255,118,255,255,255	1/3:0,16,1,10:29:255,255,244,255,150,255,255,0,255,255
-chr21	40164802	chr21:40164802:M	AAAATAAATAAATAAAATAAAATGAAATAAAA	<7.2>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:25,0:25:0,75,255	0/1:15,21:36:255,0,255	0/0:28,0:28:0,84,255
-chr21	40166989	chr21:40166989:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,23:40:255,0,147	0/1:5,15:23:211,0,43	1/1:1,28:29:255,67,0
-chr21	40174532	chr21:40174532:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,22:27:255,71,0	0/1:16,16:36:255,0,255	0/1:23,11:37:211,0,255
-chr21	40175771	chr21:40175771:M	ACACACACATACACACACACACACACACACACACACACGCACACACACACACACGCACACACACA	<34.5>,<37.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,5:5:141,141,141,15,15,0	1/2:0,2,2:4:101,51,45,51,0,46	1/1:0,3,0:3:83,9,0,84,9,86
-chr21	40188786	chr21:40188786:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,11:26:255,194,244,255,0,255	1/1:1,25,0:32:255,73,0,255,90,255	0/2:16,1,4:21:9,52,255,0,217,233
-chr21	40200017	chr21:40200017:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,9:22:111,0,138	0/1:13,7:23:69,0,164	0/1:10,5:18:37,0,155
-chr21	40201378	chr21:40201378:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,24:46:255,0,255	0/1:23,32:55:255,0,251	0/1:18,20:39:255,0,230
-chr21	40206687	chr21:40206687:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:37:153,0,232	0/1:10,12:29:137,0,136	0/1:12,15:30:175,0,142
-chr21	40214736	chr21:40214736:M	AAAAAAAAAAAAAAAAACAAAACAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,1:17:0,22,211	0/0:17,1:19:0,39,255	0/1:13,33:47:255,0,87
-chr21	40215226	chr21:40215226:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:0,3:3:77,9,0	.
-chr21	40215941	chr21:40215941:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,16:39:180,0,255	0/1:12,15:28:180,0,136	0/1:22,20:43:234,0,255
-chr21	40216284	chr21:40216284:M	TTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,18:40:255,0,255	0/1:15,17:33:255,0,253	0/0:44,0:45:0,134,255
-chr21	40231125	chr21:40231125:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,12:28:159,0,168	0/1:12,9:23:111,0,142	1/1:2,24:32:255,56,0
-chr21	40240350	chr21:40240350:M	TTTTTTTTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:7:0,21,194	0/1:2,12:18:255,0,35	0/0:0,0:2:0,1,2
-chr21	40242150	chr21:40242150:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,5:43:0,39,255	0/1:17,14:31:143,0,192	0/0:35,3:39:0,63,255
-chr21	40257470	chr21:40257470:M	ACACACACACACACACACACACACACACA	<22.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,5:18:96,0,255	0/0:15,0:17:0,25,255	1/1:0,3:7:106,12,0
-chr21	40261653	chr21:40261653:M	ACACACACACACACACACACACACACACACACACA	<16.5>,<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,10,16,0:27:255,248,255,149,0,210,255,255,255,255	2/3:1,1,7,7:19:255,255,255,161,159,149,92,159,0,169	0/1:16,18,0,0:35:196,0,163,255,217,255,255,255,255,255
-chr21	40266778	chr21:40266778:M	ATATATATATATATATATATATA	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,1,0:6:65,14,8,28,0,71	1/1:0,4,0:5:107,12,0,110,15,135	2/2:0,0,4:10:232,150,132,27,19,0
-chr21	40266800	chr21:40266800:M	ACACACACACACACCCCCACACACA	<11.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:3,2:5:12,0,25	0/0:8,0:8:0,22,102	0/1:6,3:9:14,0,52
-chr21	40280182	chr21:40280182:M	TTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,2,0:10:7,0,107,30,132,217	0/2:12,0,2:14:15,33,196,0,200,255	1/2:2,7,3:12:137,17,18,68,0,109
-chr21	40282591	chr21:40282591:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,28	.	1/1:0,5:8:169,21,0
-chr21	40292061	chr21:40292061:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,15:30:197,0,196	0/1:11,19:30:252,0,109	0/1:19,18:37:224,0,242
-chr21	40292186	chr21:40292186:M	TTTTTTTTTTTTTTTTTTTTT	<20>,<22>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,1,3:12:21,34,156,0,85,99	1/2:1,1,1:3:11,2,20,3,0,22	1/2:0,6,2:10:129,42,37,108,0,146
-chr21	40292501	chr21:40292501:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,1:47:0,120,255	0/0:38,1:42:0,105,255	0/1:18,27:47:255,0,207
-chr21	40296832	chr21:40296832:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:0,0:1:0,3,10	0/1:1,3:5:82,0,14
-chr21	40318337	chr21:40318337:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,23:51:255,0,208	0/1:15,20:36:248,0,169	1/1:0,28:29:255,85,0
-chr21	40321617	chr21:40321617:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/0:24,1:26:0,56,255	0/1:11,6:20:58,0,158
-chr21	40322522	chr21:40322522:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,18:29:255,0,103	0/1:13,14:28:177,0,149	0/1:12,14:27:187,0,141
-chr21	40329613	chr21:40329613:M	TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAATAAAAATAAAAAATAAA	<15>	.	.	Motif=TAAA	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,6:6:108,18,0	1/1:0,16:16:255,47,0
-chr21	40330274	chr21:40330274:M	TATATTTATTATATTATATGCATATATTTATATATAATAAATTATATATTTATTATATTATAT	<3.8>	.	.	Motif=TATAT	GT:AD:DP:PL	0/1:6,8:15:255,0,106	0/1:1,2:3:68,0,17	0/1:5,3:9:106,0,101
-chr21	40334716	chr21:40334716:M	ACCACAACCACAACC	<1.5>	.	.	Motif=ACCACA	GT:AD:DP:PL	0/1:23,12:35:129,0,255	0/1:14,23:37:255,0,146	0/1:15,21:36:255,0,176
-chr21	40342611	chr21:40342611:M	TGTGTGTGTGTGTGTGT	<7.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:24,0:25:0,67,255	0/1:7,4:11:14,0,45	0/0:14,0:14:0,37,152
-chr21	40342627	chr21:40342627:M	TATATATATATATATATATATAT	<14.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:11,5:18:111,0,255	0/1:0,0:7:18,0,25	0/0:13,0:16:0,36,255
-chr21	40349137	chr21:40349137:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,84	1/1:0,3:3:81,9,0	0/0:11,0:16:0,37,255
-chr21	40354849	chr21:40354849:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,20:22:255,45,0	1/1:0,13:13:255,39,0	0/0:2,0:3:0,9,69
-chr21	40356389	chr21:40356389:M	ATATATATATATATATATAT	<13>	.	.	Motif=AT	GT:AD:DP:PL	0/1:22,9:34:212,0,255	0/1:11,6:20:152,0,255	0/0:37,0:40:0,119,255
-chr21	40357862	chr21:40357862:M	AAAAAAAAACAAAAACAAAAA	<3.7>	.	.	Motif=AAAACA	GT:AD:DP:PL	0/1:19,19:38:255,0,255	1/1:0,32:32:255,96,0	0/0:39,0:39:0,117,255
-chr21	40363253	chr21:40363253:M	TTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:9,0:11:0,30,255	0/1:2,4:7:110,0,44	0/0:4,0:8:0,15,145
-chr21	40369386	chr21:40369386:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>	.	.	Motif=GT	GT:AD:DP:PL	0/0:14,0:19:0,44,255	1/1:0,12:15:206,35,0	0/1:8,12:25:181,0,74
-chr21	40370256	chr21:40370256:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:30:0,70,255	0/1:13,13:26:148,0,148	0/0:35,2:39:0,78,255
-chr21	40370628	chr21:40370628:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,2:30:0,51,255	0/1:12,14:26:172,0,136	0/0:41,0:42:0,123,255
-chr21	40371423	chr21:40371423:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,23:41:255,0,194	0/1:20,24:48:255,0,220	0/0:42,4:48:0,68,255
-chr21	40378555	chr21:40378555:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:0,0,0	1/1:0,4:6:124,13,0	.
-chr21	40396680	chr21:40396680:M	CTACTACTACTACTACTACTACCACCACTCCTACCACAACTACTACCACTAC	<18.3>	.	.	Motif=CTA	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:5,8:14:101,0,47	0/0:17,0:18:0,50,255
-chr21	40398627	chr21:40398627:M	TTTTTTCTTTCTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:11:51,0,51	0/1:8,3:12:12,0,100	0/0:16,0:19:0,50,255
-chr21	40399270	chr21:40399270:M	ACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACA	<7.6>	.	.	Motif=ACAAA	GT:AD:DP:PL	0/0:22,0:22:0,65,255	0/1:6,16:22:226,0,44	0/0:23,0:23:0,68,255
-chr21	40402666	chr21:40402666:M	TTTTTTATTTGTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:32:0,76,255	0/1:16,16:33:190,0,182	0/0:39,2:41:0,85,255
-chr21	40403630	chr21:40403630:M	CACACACACACACACACACACACACACACACACA	<16>,<18>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,11,13:26:255,233,255,226,0,255	1/2:4,10,10:25:227,113,238,122,0,252	2/2:1,0,17:18:255,255,255,35,51,0
-chr21	40410760	chr21:40410760:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,15:38:255,0,255	0/1:20,13:33:255,0,255	0/0:45,0:50:0,148,255
-chr21	40411176	chr21:40411176:M	ACACACACACACACACACACACACACACACACACACACACACACACAC	<19>,<23>	.	.	Motif=AC	GT:AD:DP:PL	0/0:16,0,0:16:0,48,255,47,255,255	0/1:10,5,0:18:120,0,244,149,162,255	0/2:11,0,9:20:93,151,255,0,185,127
-chr21	40419139	chr21:40419139:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,5:15:47,0,139	1/1:1,19:20:255,41,0	0/0:20,1:21:0,44,255
-chr21	40425670	chr21:40425670:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:10,2:15:14,0,133	0/1:8,3:12:24,0,94	0/1:7,1:9:2,0,89
-chr21	40428235	chr21:40428235:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<20>,<22>,<26>,<27>	.	.	Motif=TG	GT:AD:DP:PL	1/4:0,6,0,0,3:10:217,52,78,216,92,253,213,48,214,211,173,0,164,169,164	1/2:0,11,7,0,0:18:255,196,154,255,0,255,255,196,255,255,255,196,255,255,255	3/4:0,0,0,6,4:10:218,235,255,235,255,255,57,69,69,39,101,102,102,0,73
-chr21	40428834	chr21:40428834:M	ACACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/0:43,0:44:0,130,255	0/0:47,0:48:0,141,255	0/1:15,17:32:219,0,181
-chr21	40432206	chr21:40432206:M	AATAAAAAATAAATATATAAATAAATAAATAAATA	<11.8>,<12.8>,<13.5>	.	.	Motif=AATA	GT:AD:DP:PL	1/2:0,9,13,1:29:255,251,182,178,0,112,255,178,171,255	0/1:7,3,0,0:13:74,0,229,40,230,255,83,238,255,255	2/3:0,0,11,4:15:255,255,255,63,62,19,170,147,0,126
-chr21	40433347	chr21:40433347:M	AAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:44,0,20	0/1:1,1:4:17,0,31	1/1:0,3:3:79,9,0
-chr21	40435547	chr21:40435547:M	AAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,21,15:38:255,236,165,255,0,255	1/1:2,23,1:26:255,41,0,255,58,255	1/2:0,15,14:31:255,255,189,226,0,179
-chr21	40452238	chr21:40452238:M	ACACACACACACACACACACACACACACACA	<18.5>,<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	0/3:14,0,0,10:24:233,255,255,255,255,255,0,255,255,255	1/3:0,14,0,5:20:255,149,107,255,148,255,255,0,235,255	0/2:11,1,5,0:18:114,69,255,0,255,255,150,255,255,255
-chr21	40453041	chr21:40453041:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<21>,<24>,<29>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,8,5:18:255,255,255,153,153,121,251,255,0,239	1/2:0,6,7,0:13:255,187,178,167,0,145,255,196,167,255	1/3:0,9,0,3:14:255,103,77,255,105,255,252,0,252,238
-chr21	40457530	chr21:40457530:M	AAACAAACAAACAAACAAACAAACAAAAAAAC	<9>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:15,16:31:198,0,180	0/1:19,22:41:255,0,206	0/0:49,0:49:0,144,255
-chr21	40481531	chr21:40481531:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	.	1/1:1,5:6:64,1,0	0/1:2,3:5:35,0,18
-chr21	40487274	chr21:40487274:M	TGTGTGTGTGCATGTGTGCGTGTGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTG	<26>	.	.	Motif=TG	GT:AD:DP:PL	0/0:11,0:16:0,5,69	1/1:5,8:23:92,7,0	0/1:6,7:16:49,0,15
-chr21	40487327	chr21:40487327:M	GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15>	.	.	Motif=GA	GT:AD:DP:PL	0/1:11,20:37:221,0,45	0/1:12,14:30:140,0,73	0/0:25,3:29:0,41,255
-chr21	40492678	chr21:40492678:M	AGAACAGAAAAAAAGAAAGAA	<6.2>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:24,7:31:48,0,255	1/1:0,23:24:255,68,0	0/1:30,11:41:91,0,255
-chr21	40493864	chr21:40493864:M	AAAAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,6,6:22:145,7,208,0,90,193	1/2:0,3,9:12:255,196,173,65,0,33	0/0:9,1,0:10:0,1,217,24,219,239
-chr21	40493880	chr21:40493880:M	ATATATACATATATATACATATATATATA	<15>,<15.5>,<16.5>,<17.5>	.	.	Motif=AT	GT:AD:DP:PL	2/3:1,1,7,7,0:21:160,89,90,26,54,51,10,4,0,108,134,106,88,151,255	1/3:0,3,0,7,0:11:175,132,111,110,93,90,17,0,16,30,119,96,99,58,160	2/4:0,0,7,0,5:17:255,203,175,126,117,89,158,109,62,132,150,73,0,102,195
-chr21	40494825	chr21:40494825:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,23:47:255,0,255	0/1:32,14:46:112,0,255	0/0:53,3:56:0,110,255
-chr21	40516122	chr21:40516122:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,21:36:255,0,183	0/1:16,23:39:255,0,175	0/0:48,0:48:0,142,255
-chr21	40516889	chr21:40516889:M	ATATATATATATATATATA	<10.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:12,0,8:23:187,213,255,0,147,255	0/2:8,0,7:16:165,182,254,0,96,180	0/1:16,8,0:27:37,0,135,111,210,255
-chr21	40519851	chr21:40519851:M	TGTGTGTGTGTATGCGTGTGTGTGTGTGT	<17.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:17,7:25:93,0,255	0/1:16,13:33:229,0,255	0/0:31,0:31:0,93,255
-chr21	40530880	chr21:40530880:M	TCCATCCATCCATCCATCCATCCATCCATCCATCCATTCAACCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAACCATCCAT	<11.2>	.	.	Motif=TCCA	GT:AD:DP:PL	1/1:0,9:9:239,27,0	1/1:0,8:8:217,24,0	.
-chr21	40532869	chr21:40532869:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>,<16>,<19>,<20>	.	.	Motif=TG	GT:AD:DP:PL	2/4:0,0,16,1,6:24:255,255,255,119,184,136,255,255,90,255,255,255,0,255,255	2/3:0,0,14,11,0:26:255,255,255,255,255,255,255,255,0,255,255,255,197,255,255	1/4:0,7,0,1,13:22:255,239,255,255,255,255,255,211,255,255,197,0,186,179,156
-chr21	40548504	chr21:40548504:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:21:0,62,255	0/0:26,0:26:0,76,255	1/1:1,23:24:255,53,0
-chr21	40554197	chr21:40554197:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:17,1:19:0,38,255	0/1:18,8:28:55,0,248	0/1:20,5:28:28,0,255
-chr21	40558448	chr21:40558448:M	AAAAAGAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,18:39:223,0,255	0/0:27,1:28:0,65,255	0/1:22,12:34:118,0,255
-chr21	40559459	chr21:40559459:M	AAAAAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,5:22:255,76,25,255,0,241	0/1:6,5,2:14:103,0,142,55,81,129	0/2:6,0,7:14:85,93,241,0,95,67
-chr21	40559787	chr21:40559787:M	TTTTTTTTTTTTTTTTTTTT	<14>,<16>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,3,4:9:169,178,216,71,110,96,107,105,0,93	1/3:0,4,0,5:12:227,106,143,236,156,255,137,0,132,116	0/2:5,1,2,1:9:44,29,170,0,117,139,44,98,69,114
-chr21	40563649	chr21:40563649:M	TATGTTTATGTTTGTTTATATATATGTTTAT	<4.8>	.	.	Motif=TATGTT	GT:AD:DP:PL	0/1:11,11:23:24,0,24	0/0:2,0:2:0,4,13	1/1:0,16:16:103,34,0
-chr21	40572073	chr21:40572073:M	TGTGTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGT	<24.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,7,14:23:255,141,115,101,0,41	0/2:6,2,9:17:86,64,180,0,49,28	0/2:6,2,9:17:88,65,181,0,50,28
-chr21	40574707	chr21:40574707:M	TTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:17:255,50,0	0/1:3,3:8:69,0,59	1/1:0,13:17:255,44,0
-chr21	40577242	chr21:40577242:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,28:29:255,85,0	0/1:16,10:28:101,0,204	1/1:0,25:27:255,78,0
-chr21	40580081	chr21:40580081:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,17:33:226,0,173	0/0:28,0:35:0,100,255	0/1:21,7:30:39,0,255
-chr21	40583907	chr21:40583907:M	AAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,16,7:28:255,178,147,255,0,255	0/2:16,0,11:30:255,255,255,0,255,255	0/1:21,14,0:37:156,0,255,250,255,255
-chr21	40585180	chr21:40585180:M	TTTTTTTTTTTTTTT	<14>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/2:17,1,5:27:112,147,255,0,255,255	0/2:10,0,9:23:213,247,255,0,187,255	0/1:17,16,0:35:204,0,198,255,255,255
-chr21	40585420	chr21:40585420:M	AAAAAAAAAAAAAAAAAAAAAAAAGAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:0,0:1:0,2,9	1/1:0,9:9:247,27,0	0/0:1,0:2:0,6,35
-chr21	40593321	chr21:40593321:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,17:31:227,0,162	0/1:18,22:42:255,0,205	0/1:15,22:37:255,0,165
-chr21	40595378	chr21:40595378:M	AAAAAAAAAGAAAAGAAAAGA	<5.2>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:12,16:29:224,0,151	0/1:17,27:44:255,0,178	0/1:16,14:30:173,0,211
-chr21	40596870	chr21:40596870:M	ATATATATATATAT	<8>	.	.	Motif=AT	GT:AD:DP:PL	0/1:17,15:32:193,0,233	0/0:35,0:35:0,103,255	0/1:20,19:39:239,0,255
-chr21	40597501	chr21:40597501:M	TTTTTTTTTTTTTTTTTTTTTTT	<11>,<21>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,0,4:4:136,145,171,12,12,0	1/2:0,15,1:17:255,33,24,255,0,255	0/2:2,0,1:5:33,44,137,0,80,73
-chr21	40598498	chr21:40598498:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,3:6:43,0,17	0/0:1,0:1:0,3,16	0/0:3,0:3:0,9,50
-chr21	40603926	chr21:40603926:M	TTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,9:21:255,161,101,215,0,155	2/2:0,1,15:19:255,255,252,49,25,0	0/1:4,10,1:17:255,0,83,155,87,227
-chr21	40611058	chr21:40611058:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,88	0/0:3,0:3:0,9,50	0/1:7,4:11:36,0,88
-chr21	40615282	chr21:40615282:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	0/0:6,0:7:0,20,116	0/1:9,1:14:12,0,113	0/1:3,7:11:99,0,19
-chr21	40617017	chr21:40617017:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0:1:0,3,18	1/1:0,3:4:41,1,0	0/0:7,1:8:0,6,106
-chr21	40618664	chr21:40618664:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,15:30:255,0,255	0/1:15,13:34:255,0,255	0/1:16,18:38:255,0,255
-chr21	40621923	chr21:40621923:M	GGAAGGAAAGGAAGGAAGAAAAAAGAAAGGAAGGAAGGAA	<6>,<10.2>	.	.	Motif=GGAA	GT:AD:DP:PL	1/2:0,3,12:15:69,40,255,45,0,29	1/2:1,6,15:22:122,46,255,94,0,75	0/2:10,1,7:19:0,29,255,0,39,10
-chr21	40622872	chr21:40622872:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,15:35:183,0,249	1/1:2,31:33:255,62,0	0/0:35,0:41:0,118,255
-chr21	40623239	chr21:40623239:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:1,29:30:255,70,0	0/1:15,20:35:255,0,176
-chr21	40628693	chr21:40628693:M	CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT	<8.5>,<10.5>,<11.5>,<12.5>	.	.	Motif=CTAT	GT:AD:DP:PL	1/2:0,9,14,0,0:23:255,255,255,255,0,214,255,255,255,255,255,255,255,255,255	1/3:0,11,0,23,0:35:255,255,255,255,255,255,255,0,255,255,255,255,255,255,255	2/4:0,0,7,0,18:26:255,255,255,255,255,255,255,255,255,255,211,197,0,140,153
-chr21	40629042	chr21:40629042:M	TGTGTGTGTATGTGTGTGTAGTATGTGTGTGTGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<33>,<34>,<37>,<38>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,9,0,0:18:255,160,108,160,0,108,255,160,160,255,255,160,160,255,255	1/3:0,4,0,3,0:8:193,81,72,148,83,140,114,0,67,105,164,50,118,114,156	2/4:0,0,7,0,6:13:255,225,255,104,169,148,255,225,104,255,198,121,0,198,180
-chr21	40636761	chr21:40636761:M	TTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,18:37:255,0,255	0/0:20,0:25:0,54,255	0/1:10,14:25:255,0,194
-chr21	40639076	chr21:40639076:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,10:27:108,0,210	0/0:26,0:30:0,84,255	0/1:14,6:20:49,0,195
-chr21	40639668	chr21:40639668:M	TGTGTATGTGTATGTGTGTGCATGTGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,6:15:69,0,126	0/0:24,0:24:0,71,255	0/1:18,9:29:90,0,255
-chr21	40640821	chr21:40640821:M	CACACTCACACCCCACACACACAAAAACACCACACGCACACACACAC	<24.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:10,14:24:198,0,121	0/0:19,0:19:0,56,255	0/1:12,6:18:59,0,171
-chr21	40642043	chr21:40642043:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:17,0,123	0/1:7,8:17:85,0,89	0/1:4,2:6:17,0,52
-chr21	40648251	chr21:40648251:M	ACACACACACACACACACACACACACACACACTCACACAC	<16>,<21>,<24>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,10,10:21:255,255,255,255,255,253,179,255,0,241	1/2:0,10,9,0:21:255,153,211,255,0,255,255,247,255,255	0/3:18,0,1,9:32:222,255,255,255,255,255,0,255,255,255
-chr21	40652348	chr21:40652348:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,20:32:255,0,17	1/1:0,40:49:255,121,0	0/0:14,2:29:0,1,255
-chr21	40654095	chr21:40654095:M	AAAAAGAAAAAGAAAAAAGAAAAA	<3.8>	.	.	Motif=AAAAAG	GT:AD:DP:PL	1/1:0,1:1:6,2,0	1/1:0,11:11:64,22,0	0/0:16,0:19:0,30,90
-chr21	40655447	chr21:40655447:M	TTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,13,0:21:174,0,84,233,144,255	0/2:15,0,7:27:155,193,255,0,255,255	1/2:0,9,7:18:255,205,178,157,0,212
-chr21	40656523	chr21:40656523:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:23:101,0,193	0/0:27,0:29:0,85,255	0/1:17,19:41:255,0,211
-chr21	40663258	chr21:40663258:M	GTGTGTGTGTG	<4.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,4:22:16,0,255	0/1:7,3:10:26,0,98	0/1:15,6:21:53,0,220
-chr21	40669591	chr21:40669591:M	TTTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,60,0	0/1:13,8:27:184,0,255	1/1:3,25:28:255,1,0
-chr21	40670537	chr21:40670537:M	AAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,1:18:0,18,255	0/1:16,6:24:112,0,255	0/1:14,3:18:23,0,255
-chr21	40671693	chr21:40671693:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:5:0,0,82	0/0:8,0:11:0,33,255	0/1:3,3:7:82,0,71
-chr21	40674610	chr21:40674610:M	TTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTT	<5.3>	.	.	Motif=TTTTCT	GT:AD:DP:PL	1/1:0,2:3:38,6,0	0/0:1,0:3:0,3,18	1/1:0,4:6:75,12,0
-chr21	40675015	chr21:40675015:M	ACACACACACACACACA	<7.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:13,13:27:174,0,173	0/1:15,13:29:153,0,190	0/1:12,18:33:248,0,143
-chr21	40681490	chr21:40681490:M	TTTTTTTTTTTTTTT	<12>,<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/3:0,25,3,8:38:255,255,189,255,93,255,255,0,255,255	0/3:11,0,2,9:26:255,255,255,124,255,255,0,255,255,255	1/2:0,16,9,0:26:255,255,232,255,0,255,255,169,255,255
-chr21	40684063	chr21:40684063:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21:22:255,64,0	0/1:8,7:15:80,0,98	1/1:1,19:22:255,46,0
-chr21	40698870	chr21:40698870:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:3:0,9,83	0/0:3,0:3:0,9,84	0/1:2,10:12:233,0,19
-chr21	40706181	chr21:40706181:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:22:0,53,255	0/0:9,1:10:0,14,116	0/1:6,5:12:42,0,56
-chr21	40708101	chr21:40708101:M	GGGGTAGGGGAAGGGCAAGTGGGAA	<4>	.	.	Motif=GGGGAA	GT:AD:DP:PL	0/0:34,0:34:0,99,255	0/0:29,2:32:0,51,255	0/1:18,17:35:186,0,203
-chr21	40712805	chr21:40712805:M	GAGACAGAGAGAGAGAGAGAGAGAGAGAGA	<17>	.	.	Motif=GA	GT:AD:DP:PL	0/0:22,0:22:0,66,255	0/0:37,0:38:0,114,255	0/1:12,14:28:255,0,249
-chr21	40716381	chr21:40716381:M	TGTGTGTGTGTGTGTGTGTG	<9>,<11>	.	.	Motif=TG	GT:AD:DP:PL	0/2:21,0,10:31:102,190,255,0,255,255	0/2:13,1,16:30:202,255,255,0,180,159	0/1:23,21,0:44:255,0,255,255,255,255
-chr21	40720675	chr21:40720675:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:41,0:41:0,121,255	0/0:36,0:36:0,106,255	0/1:22,21:43:255,0,255
-chr21	40726550	chr21:40726550:M	AAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,0,0:40:0,118,255,120,255,255	0/1:15,21,1:37:255,0,161,255,248,255	0/2:21,2,22:46:255,255,255,0,255,255
-chr21	40731729	chr21:40731729:M	CCCCCCCCCCCGCCCCCC	<19>	.	.	Motif=C	GT:AD:DP:PL	0/1:3,3:6:35,0,35	0/0:12,0:12:0,35,203	1/1:1,24:25:255,56,0
-chr21	40739782	chr21:40739782:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,12:29:145,0,209	0/1:17,15:35:173,0,206	0/1:12,19:33:254,0,128
-chr21	40746376	chr21:40746376:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,12:34:237,0,255	0/1:22,21:44:255,0,255	0/1:20,23:45:255,0,255
-chr21	40755453	chr21:40755453:M	TAAAAAATAAATAAAAAATAAA	<6.5>	.	.	Motif=TAAA	GT:AD:DP:PL	0/1:9,15:24:218,0,103	0/1:21,14:35:151,0,255	0/1:12,12:24:154,0,154
-chr21	40756977	chr21:40756977:M	GTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,16:30:206,0,159	0/1:15,18:33:216,0,164	0/1:13,12:25:142,0,160
-chr21	40759959	chr21:40759959:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9.5>,<10.5>,<11.5>	.	.	Motif=ATTT	GT:AD:DP:PL	3/3:0,0,0,20:20:255,255,255,255,255,255,60,60,59,0	1/3:0,8,0,3:11:255,81,57,198,54,168,218,0,144,205	2/3:0,0,9,5:14:255,255,255,94,93,53,169,145,0,129
-chr21	40765100	chr21:40765100:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,18:32:247,0,152	0/1:18,19:40:231,0,219	0/1:19,19:38:237,0,235
-chr21	40766670	chr21:40766670:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:10:16,0,74	0/0:4,1:7:0,6,67	0/1:4,4:9:47,0,32
-chr21	40766693	chr21:40766693:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,3:12:42,0,204	0/1:6,1:8:6,0,137	0/1:12,3:16:33,0,255
-chr21	40767881	chr21:40767881:M	TCTCTCTTTCTCTCTCTC	<12>	.	.	Motif=TC	GT:AD:DP:PL	0/1:21,11:34:217,0,255	0/1:22,20:45:255,0,255	0/1:19,16:35:255,0,255
-chr21	40780399	chr21:40780399:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<6>,<7>,<12>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,17,2,0:19:255,57,0,255,27,202,255,57,255,255	1/3:0,9,3,5:20:255,55,97,146,95,191,255,0,91,255	1/2:0,7,4,1:12:255,41,22,81,0,62,255,28,68,255
-chr21	40780424	chr21:40780424:M	TATATATATATATATATATATATAT	<11.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:17,2:20:0,28,184	0/1:9,2:12:1,0,75	0/1:7,4:13:18,0,55
-chr21	40781013	chr21:40781013:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,18:32:250,0,175	0/1:12,19:32:250,0,132	0/1:20,18:38:224,0,255
-chr21	40781993	chr21:40781993:M	AAAAAAAAAAAAAAAAAAGAAAAAAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,0:1:13,3,0	1/1:0,0:1:12,3,0	1/1:0,3:3:83,9,0
-chr21	40789268	chr21:40789268:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:30:0,69,255	0/1:18,23:44:255,0,199	0/0:42,1:44:0,111,255
-chr21	40789554	chr21:40789554:M	TTTTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,8:19:95,116,255,0,126,106	0/1:6,6,1:18:171,0,145,165,90,250	0/2:8,0,8:18:100,139,255,0,143,97
-chr21	40790167	chr21:40790167:M	TTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,9:11:238,0,21	0/1:3,8:13:198,0,57	0/1:4,14:19:255,0,62
-chr21	40791157	chr21:40791157:M	AAAAAAAAAAAAAGAAAAGAAAAA	<23>,<25>	.	.	Motif=A	GT:AD:DP:PL	0/2:10,1,6:17:63,93,255,0,140,146	1/2:0,9,14:24:255,242,255,156,0,190	0/2:14,0,12:26:143,215,255,0,215,179
-chr21	40792124	chr21:40792124:M	TCTTCTTCTTCTTCTT	<6.7>	.	.	Motif=TCT	GT:AD:DP:PL	0/0:9,0:11:0,32,190	1/1:0,3:3:53,9,0	0/0:13,0:13:0,38,234
-chr21	40792138	chr21:40792138:M	TTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:5:0,7,28	0/1:2,9:13:220,0,23	0/0:3,0:3:0,9,86
-chr21	40794543	chr21:40794543:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,7:18:73,0,144	0/1:6,18:25:235,0,32	0/1:18,18:39:214,0,214
-chr21	40794889	chr21:40794889:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/1:17,12:29:124,0,212	0/0:40,0:41:0,120,255
-chr21	40795355	chr21:40795355:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,81,255	0/1:13,23:37:255,0,134	0/0:35,0:35:0,103,255
-chr21	40800716	chr21:40800716:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:11:37,0,88	0/0:6,1:8:0,7,97	0/0:14,2:20:0,13,223
-chr21	40800963	chr21:40800963:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,0:31:0,91,255	0/1:11,14:26:169,0,128	0/0:34,0:36:0,105,255
-chr21	40805699	chr21:40805699:M	TTTTCTTTCTTTTCTTTTCTTTTTTTT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:15,16:31:255,0,238	0/1:8,10:18:170,0,123	0/1:21,22:43:255,0,255
-chr21	40807110	chr21:40807110:M	AATCAATCAATCAATCAATCAATCAATCAATCAAT	<7.8>	.	.	Motif=AATC	GT:AD:DP:PL	1/1:0,36:37:255,107,0	1/1:0,30:30:255,88,0	1/1:0,32:32:255,95,0
-chr21	40808475	chr21:40808475:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13:16:236,28,0	1/1:2,16:20:219,3,0	0/1:6,23:31:255,0,15
-chr21	40817087	chr21:40817087:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,19:44:226,0,255	0/1:14,16:33:190,0,173	0/1:14,17:34:241,0,156
-chr21	40818548	chr21:40818548:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:1,0:1:0,3,27	1/1:0,15:16:255,48,0
-chr21	40821112	chr21:40821112:M	ATATATATAGATATATATATCTTCACATATATATATATA	<7.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,12:12:255,36,0	0/1:0,22:28:255,0,88
-chr21	40821372	chr21:40821372:M	CACACACACAGACACACGCGCGCACACACACACACACACACACACAC	<24.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,23:23:255,68,0	1/1:0,14:14:238,41,0	0/1:7,9:17:111,0,76
-chr21	40822319	chr21:40822319:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:27,3,0	1/1:0,3:3:79,9,0	.
-chr21	40823204	chr21:40823204:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<10.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:22,13,2:37:255,0,255,211,255,255	0/1:19,14,0:35:255,0,255,255,255,255	1/2:0,16,21:37:255,255,255,255,0,190
-chr21	40824404	chr21:40824404:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,8:16:97,0,97	0/1:8,12:21:153,0,76	0/1:5,9:15:124,0,45
-chr21	40825267	chr21:40825267:M	TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<11.5>,<13.5>	.	.	Motif=TTCC	GT:AD:DP:PL	1/2:0,12,8:25:255,148,217,209,0,255	1/1:0,21,0:23:255,67,0,255,69,255	2/2:0,0,10:11:168,198,255,29,33,0
-chr21	40827469	chr21:40827469:M	AAAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/0:7,0:9:0,21,159	0/0:1,0:4:0,1,19	1/1:0,9:20:217,20,0
-chr21	40827484	chr21:40827484:M	AAAGAAAAGAAAGAAAGAAA	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:20,0:22:0,60,255	0/0:19,0:23:0,59,255	0/1:8,18:32:255,0,153
-chr21	40831308	chr21:40831308:M	CACACACACACAGGCACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/1:15,16:31:217,0,198	1/1:0,34:34:255,100,0	0/1:17,25:43:255,0,196
-chr21	40834410	chr21:40834410:M	AATAATAATAATAATAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATA	<15>,<21>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:8,10,0:18:247,0,184,255,151,255	0/1:5,4,0:10:94,0,122,101,81,174	1/2:0,5,4:9:199,74,94,136,0,124
-chr21	40843369	chr21:40843369:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:6,9:16:204,0,127	0/1:17,14:34:255,0,255	0/1:10,25:37:255,0,172
-chr21	40843791	chr21:40843791:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,12:22:160,0,80	0/1:14,7:24:79,0,166	0/1:11,8:21:89,0,132
-chr21	40851703	chr21:40851703:M	AAAAAAAGAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,2:45:0,95,255	0/1:14,18:33:230,0,150	0/0:39,2:41:0,84,255
-chr21	40853041	chr21:40853041:M	CACACACACACACACACACACACACACACACACACA	<23>,<25>,<26>	.	.	Motif=CA	GT:AD:DP:PL	1/3:0,5,0,2:8:207,54,36,183,35,174,153,0,148,146	2/3:0,0,5,6:11:255,255,255,100,100,68,84,83,0,52	1/2:0,4,5,0:10:255,140,122,110,0,89,209,88,109,194
-chr21	40853692	chr21:40853692:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:27:0,77,255	0/1:21,13:36:140,0,255	0/0:28,2:30:0,53,255
-chr21	40855201	chr21:40855201:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/1:5,5:13:79,0,50	0/1:8,3:11:22,0,111
-chr21	40856358	chr21:40856358:M	GAGAGAGAGAGAGAGAGAGA	<8>	.	.	Motif=GA	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/0:23,0:25:0,70,255	0/1:12,22:36:255,0,194
-chr21	40857178	chr21:40857178:M	ACACACACACACACACACACACACACAC	<15>	.	.	Motif=AC	GT:AD:DP:PL	0/0:32,0:34:0,100,255	0/1:16,17:33:202,0,184	0/1:19,11:31:109,0,255
-chr21	40867099	chr21:40867099:M	AGAGAGAGAGAGAGAGA	<10.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:17,14:33:218,0,255	0/0:5,0:5:0,15,110	0/1:8,14:23:243,0,112
-chr21	40875086	chr21:40875086:M	AAAAAAAAAAAAAAAAAAA	<18>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,3,0:18:21,0,180,68,194,255	0/2:6,1,4:13:50,59,184,0,60,78	0/1:11,5,0:20:65,0,137,111,160,255
-chr21	40883733	chr21:40883733:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:27:0,79,255	0/1:13,16:30:211,0,141	0/1:13,11:25:136,0,161
-chr21	40884083	chr21:40884083:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:15,6:22:43,0,212	0/1:10,8:18:95,0,131
-chr21	40889997	chr21:40889997:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,23:34:255,0,178	0/1:17,32:52:255,0,255	1/1:0,38:41:255,122,0
-chr21	40901110	chr21:40901110:M	CCCCCGCCCCCTCCCCCCCCCCC	<22>	.	.	Motif=C	GT:AD:DP:PL	0/1:7,19:28:255,0,51	0/1:2,7:10:92,0,7	1/1:0,19:19:255,56,0
-chr21	40905882	chr21:40905882:M	AAAAAAAAGAAAAAAAAAAAAAGAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,1:28:0,63,255	0/0:29,2:31:0,56,255	0/1:21,14:36:157,0,255
-chr21	40909827	chr21:40909827:M	ATATATATATATATATATATACTTTTATATATAT	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/1:15,7:25:170,0,255	0/0:5,0:5:0,15,134	1/1:0,13:13:255,39,0
-chr21	40912957	chr21:40912957:M	TTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5,0:7:177,21,0,129,20,115	1/2:0,3,2:5:144,35,20,52,0,37	1/2:0,6,3:11:249,42,23,104,0,90
-chr21	40913377	chr21:40913377:M	ACACACACACACACACACACACACACACACACACACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,28:28:255,84,0	1/1:0,11:21:255,36,0	1/1:0,35:38:255,113,0
-chr21	40913800	chr21:40913800:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:4,33:38:255,37,0	0/1:17,19:36:229,0,194	1/1:3,55:59:255,119,0
-chr21	40922518	chr21:40922518:M	CACACACACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	.	1/1:0,12:13:223,38,0	.
-chr21	40922802	chr21:40922802:M	TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC	<7>,<10>,<12>	.	.	Motif=TATC	GT:AD:DP:PL	0/3:19,0,0,9:28:91,172,255,171,255,255,0,255,255,255	1/3:0,17,0,7:24:255,125,144,255,192,255,255,0,255,255	0/2:13,0,10,0:23:120,186,255,0,242,176,185,255,206,255
-chr21	40922965	chr21:40922965:M	AAAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,31:34:255,255,255,101,93,0	1/2:0,19,15:36:255,255,255,255,0,255	2/2:0,1,40:46:255,255,255,131,98,0
-chr21	40923354	chr21:40923354:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,98,0	1/1:1,30:31:255,73,0	1/1:1,43:44:255,111,0
-chr21	40924546	chr21:40924546:M	AAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17,1:21:255,54,0,255,42,255	1/2:0,10,6:17:255,102,55,172,0,137	1/1:0,24,2:27:255,78,0,255,43,255
-chr21	40925384	chr21:40925384:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,40:41:255,102,0	1/1:0,39:39:255,115,0	1/1:0,49:49:255,145,0
-chr21	40926278	chr21:40926278:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,20:22:255,46,0	1/1:0,31:35:255,99,0	1/1:0,36:36:255,106,0
-chr21	40927731	chr21:40927731:M	TTTTTTTTTTTT	<10>,<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,60,1:61:255,180,0,255,161,255	1/2:0,18,32:50:255,255,255,255,0,177	1/1:0,53,0:53:255,159,0,255,156,255
-chr21	40935019	chr21:40935019:M	TTTTTCTTTTCTTTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	<44>,<45>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,4:7:128,58,49,51,0,31	1/2:0,1,3:4:65,41,38,16,0,5	1/2:0,2,2:4:77,28,22,34,0,22
-chr21	40950142	chr21:40950142:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,21:44:255,0,255	0/1:25,27:52:255,0,255	1/1:0,40:40:255,118,0
-chr21	40953242	chr21:40953242:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:40,1:42:0,105,255	0/1:18,21:41:255,0,209	0/0:42,3:46:0,80,255
-chr21	40964233	chr21:40964233:M	ATATATATATA	<6.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:26,28:58:255,0,255	0/1:24,22:46:238,0,255	1/1:0,46:51:255,148,0
-chr21	40966924	chr21:40966924:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:21:102,0,139	0/1:9,10:19:116,0,99	1/1:1,24:28:255,63,0
-chr21	40973828	chr21:40973828:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,20:39:255,0,255	0/1:17,19:38:255,0,255	1/1:0,42:46:255,134,0
-chr21	40986198	chr21:40986198:M	AAAAGGAAAAGAAAAGAAAAGAA	<5.4>	.	.	Motif=AAAAG	GT:AD:DP:PL	0/1:24,22:46:255,0,255	0/1:20,16:36:255,0,255	1/1:0,33:33:255,99,0
-chr21	40989717	chr21:40989717:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:24,16:41:255,0,255	0/1:19,11:33:220,0,255	1/1:0,30:31:255,90,0
-chr21	40999709	chr21:40999709:M	TTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,2,17:35:255,255,255,0,255,255	0/2:25,1,10:40:195,160,255,0,255,255	1/2:0,7,21:28:255,255,255,124,0,42
-chr21	41000138	chr21:41000138:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<6.8>,<9.8>,<10.8>	.	.	Motif=TTTA	GT:AD:DP:PL	0/2:9,0,14,0:23:255,255,255,0,250,205,255,255,172,255	0/1:3,10,0,0:13:255,0,54,255,83,255,255,54,255,255	2/3:0,0,9,12:21:255,255,255,193,226,166,169,170,0,109
-chr21	41006219	chr21:41006219:M	GTGTGTGTGTGTGTGTGTGTG	<11.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:17,16:33:205,0,224	0/1:13,19:32:245,0,138	0/0:32,0:33:0,97,255
-chr21	41012829	chr21:41012829:M	CACACTCACACACGCACTCACACACATACCCAACACAAACTCACACACA	<23.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,7:22:70,0,198	0/0:22,0:22:0,65,255	0/1:16,13:29:155,0,204
-chr21	41015243	chr21:41015243:M	AAATAAATAAATAAATAAATAA	<8.5>,<8.8>,<9.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,12,0,4:17:255,84,37,255,84,255,232,0,214,186	3/3:0,0,0,8:8:245,169,147,245,169,245,24,24,24,0	1/2:0,17,11,0:28:255,239,162,255,0,255,255,239,255,255
-chr21	41019616	chr21:41019616:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:22:172,0,98	1/1:1,20:26:255,45,0	0/0:25,0:25:0,73,255
-chr21	41023102	chr21:41023102:M	ATATATATATATATATATATATATATATATATATATATA	<12.5>,<14.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:1,0,10:18:255,209,255,0,77,39	2/2:0,0,0:1:8,10,11,2,3,0	1/2:0,11,4:22:255,106,48,255,0,215
-chr21	41023140	chr21:41023140:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15.5>,<21.5>,<22.5>	.	.	Motif=AG	GT:AD:DP:PL	2/3:1,0,3,5:10:73,99,234,33,47,20,12,36,0,8	.	1/2:0,5,3,2:10:151,37,101,126,0,114,127,8,111,122
-chr21	41035097	chr21:41035097:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAAGAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:15:255,44,0	1/1:0,23:23:255,67,0	0/1:13,3:18:1,0,196
-chr21	41041811	chr21:41041811:M	AGAAAGAGAAAGAGAAAGAAAGAGAGAGACAGAAAGAAAGAAAGAAAAAAGAAAGA	<1.5>	.	.	Motif=AGAAAG	GT:AD:DP:PL	1/1:0,6:7:169,21,0	.	0/1:8,5:14:83,0,142
-chr21	41044192	chr21:41044192:M	TCTCTCTCTCTCTCT	<8.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,43:43:255,127,0	1/1:1,45:46:255,117,0	0/1:11,22:34:255,0,117
-chr21	41049550	chr21:41049550:M	AAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,22,18:41:255,255,227,255,0,255	2/2:0,3,32:37:255,255,255,102,55,0	0/1:7,20,0:27:255,0,49,255,126,255
-chr21	41051733	chr21:41051733:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,17:34:223,0,197	0/0:27,0:27:0,79,255	0/1:21,14:39:148,0,255
-chr21	41055109	chr21:41055109:M	AAAAAAAAAAAAAAAAA	<15>,<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,19,12,0:32:255,170,139,255,0,255,255,220,255,255	2/3:1,0,6,7:15:181,204,255,116,202,177,88,106,0,135	0/1:13,22,1,0:38:255,0,255,255,215,255,255,234,255,255
-chr21	41055830	chr21:41055830:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<22>,<23>,<26>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,0,6,5:11:217,220,223,133,136,118,103,103,0,150	1/3:0,5,0,1:6:152,27,13,109,28,96,129,0,82,130	2/3:0,0,5,6:11:227,231,236,161,165,151,84,84,0,118
-chr21	41062611	chr21:41062611:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:13,0,12:25:155,224,255,0,210,174	0/0:29,2,4:35:0,66,255,31,255,255	1/2:0,18,18:36:255,255,255,255,0,255
-chr21	41062905	chr21:41062905:M	AAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:13:106,0,139	0/0:11,0:15:0,36,255	1/1:0,18:23:255,68,0
-chr21	41070490	chr21:41070490:M	AAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,11:36:194,0,255	0/0:32,0:37:0,96,255	0/1:15,15:32:255,0,255
-chr21	41070734	chr21:41070734:M	TCTCTCTCTCTC	<5>	.	.	Motif=TC	GT:AD:DP:PL	0/1:25,20:45:255,0,255	0/1:16,15:31:182,0,200	0/1:23,17:40:202,0,255
-chr21	41073040	chr21:41073040:M	TCTATCTATCTAGCTATATATCTAT	<5.2>	.	.	Motif=TCTA	GT:AD:DP:PL	0/0:38,0:38:0,112,255	0/0:49,0:49:0,144,255	0/1:15,15:30:200,0,192
-chr21	41085124	chr21:41085124:M	TTGTTGTTGTTGTTGTGTTGTTGTTGTTTTTGTTGTTGTTGCTGTT	<14.3>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:14,15:30:182,0,162	0/0:24,0:26:0,70,255	0/1:10,11:21:129,0,112
-chr21	41085947	chr21:41085947:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,11:20:144,0,107	0/0:20,0:21:0,61,255	0/1:6,13:22:181,0,57
-chr21	41091408	chr21:41091408:M	GAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAGGAA	<13>,<17>	.	.	Motif=GAAG	GT:AD:DP:PL	1/2:0,20,3:23:255,56,23,255,0,255	2/2:0,0,1:2:17,20,30,3,3,0	1/2:0,8,4:12:255,73,87,221,0,209
-chr21	41093559	chr21:41093559:M	CACATACACACACACA	<6>	.	.	Motif=CA	GT:AD:DP:PL	0/0:38,0:40:0,116,255	0/0:38,0:38:0,114,255	0/1:18,7:25:104,0,255
-chr21	41093587	chr21:41093587:M	ACACACACACACACACACACACACACACA	<19.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:15,6,0:22:177,0,255,222,255,255	0/0:26,0,0:26:0,78,255,78,255,255	1/2:0,5,4:10:255,117,102,177,0,165
-chr21	41093868	chr21:41093868:M	TTTTTTTTTTTTTTTTTTT	<15>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/2:4,0,6:12:68,98,255,0,60,27	0/0:10,0,0:13:0,31,255,30,172,143	1/2:0,13,3:24:255,42,71,255,0,255
-chr21	41099351	chr21:41099351:M	TTTTTTTTTTTTTTTTTTTTTTTT	<22>,<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5,0:7:154,0,10,166,27,209	0/0:3,0,0:4:0,12,115,9,96,93	1/2:1,3,10:16:255,255,255,65,0,68
-chr21	41103102	chr21:41103102:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0,0:7:0,21,198,21,144,125	0/2:3,0,3:6:34,43,119,0,50,34	0/1:7,3,0:10:53,0,169,51,120,145
-chr21	41103488	chr21:41103488:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<24>,<26>,<27>	.	.	Motif=GT	GT:AD:DP:PL	0/3:11,0,0,2:13:21,54,255,34,255,255,0,255,255,255	2/3:0,0,5,5:10:255,255,255,83,83,54,83,83,0,54	0/1:9,5,0,0:14:110,0,235,133,251,255,137,251,255,255
-chr21	41107199	chr21:41107199:M	AAAAAAAAAAAAAAAAAAA	<21>,<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3,0:14:57,0,221,78,233,255	0/0:18,0,0:23:0,63,255,63,255,255	1/2:0,3,4:9:196,106,90,78,0,61
-chr21	41108362	chr21:41108362:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:18,0,23:41:255,255,255,0,255,221	0/0:27,0,2:30:0,84,255,52,255,255	1/2:0,17,10:27:255,156,105,255,0,235
-chr21	41108524	chr21:41108524:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:22:0,46,255	0/0:21,0:24:0,69,255	0/1:7,8:16:97,0,81
-chr21	41112478	chr21:41112478:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:33:0,93,255	0/0:24,0:28:0,83,255	0/1:16,9:26:162,0,255
-chr21	41115488	chr21:41115488:M	TTTTTCTTTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:155,18,0	.	1/1:0,4:6:123,15,0
-chr21	41116336	chr21:41116336:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,14:26:196,0,132	0/0:34,0:34:0,100,255	1/1:0,32:32:255,94,0
-chr21	41125939	chr21:41125939:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/1:24,17:42:189,0,255	0/0:46,2:48:0,105,255
-chr21	41126166	chr21:41126166:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,6:30:73,0,255	0/0:18,0:23:0,62,255	1/1:1,14:17:255,18,0
-chr21	41129065	chr21:41129065:M	AACAAAACAAAACAACAAAAAAAAAACACACACACAAAAAAACAAAACAACAACAACAACAA	<22.3>,<22.7>,<23.7>	.	.	Motif=AAC	GT:AD:DP:PL	1/3:0,14,0,6:21:255,151,105,255,109,231,255,0,172,255	1/2:0,7,12,0:19:255,152,97,91,0,35,255,141,90,255	3/3:0,0,0,3:3:87,84,81,64,64,56,9,9,9,0
-chr21	41131440	chr21:41131440:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:14,18:32:255,0,175	0/1:24,20:44:238,0,255	1/1:0,37:37:255,109,0
-chr21	41140799	chr21:41140799:M	TGTGTTGTGTTGCTGTT	<2.6>	.	.	Motif=TGTGT	GT:AD:DP:PL	0/1:8,23:32:255,0,131	0/0:30,0:30:0,90,255	1/1:0,28:35:255,84,0
-chr21	41140817	chr21:41140817:M	GTGGTGGTGGTGGTGGTGGTG	<5.3>	.	.	Motif=GTG	GT:AD:DP:PL	0/1:13,25:38:255,0,246	0/0:30,0:30:0,90,255	1/1:0,41:41:255,123,0
-chr21	41145711	chr21:41145711:M	TTTTTTCTTTTCTTTTTTTTCTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,11:17:156,0,62	0/1:11,8:19:85,0,137	1/1:0,28:30:255,88,0
-chr21	41150797	chr21:41150797:M	TGTGTGTGTGGTGTGTGATGTATGTGTCTGGGTGTGTGATGTGAGGTGTGTAGTGTGGTGTG	<32>	.	.	Motif=TG	GT:AD:DP:PL	0/1:7,6:13:73,0,91	0/0:23,0:23:0,67,255	0/1:9,3:12:19,0,127
-chr21	41150916	chr21:41150916:M	TGTGTGTGTGTGTG	<6>	.	.	Motif=TG	GT:AD:DP:PL	0/1:23,7:30:50,0,255	0/0:44,0:44:0,130,255	0/1:16,14:30:181,0,213
-chr21	41154937	chr21:41154937:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:7,0,9:16:117,162,255,0,108,81	0/2:10,1,3:15:11,26,190,0,119,144	1/2:3,5,8:19:154,94,176,58,0,118
-chr21	41160431	chr21:41160431:M	ATATATATAGAAATATATATTACATATATATATATATATATATATATATATATATATATATATA	<25>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,7:9:217,21,0	1/1:0,0:1:1,0,0	1/1:0,2:4:86,11,0
-chr21	41168979	chr21:41168979:M	CCCTCCCTCCC	<2.5>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:6,3:9:6,0,34	0/0:3,0:4:0,1,19	0/0:4,0:4:0,10,38
-chr21	41168987	chr21:41168987:M	CCCCCCCGCCCCCCCCCCACCCC	<22>	.	.	Motif=C	GT:AD:DP:PL	1/1:1,8:10:127,8,0	.	1/1:0,1:1:18,3,0
-chr21	41169450	chr21:41169450:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,1:22:0,47,255	0/1:10,11:24:129,0,124	0/1:10,23:34:255,0,81
-chr21	41170216	chr21:41170216:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,32:47:255,0,122	0/1:21,21:44:250,0,251	1/1:0,45:45:255,132,0
-chr21	41189195	chr21:41189195:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,22:41:255,0,201	0/1:18,23:41:255,0,193	0/1:15,14:29:166,0,184
-chr21	41196316	chr21:41196316:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,30:32:255,76,0	1/1:1,34:35:255,86,0	1/1:1,37:40:255,100,0
-chr21	41197267	chr21:41197267:M	TTTTTTTTGTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,15:20:244,20,0	1/1:1,23:29:255,25,0	1/1:1,24:28:255,44,0
-chr21	41197656	chr21:41197656:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,20:29:255,0,81	0/1:26,34:62:255,0,255	0/1:28,19:47:205,0,255
-chr21	41198850	chr21:41198850:M	TTTATTTATTTATTTATTTATTTATTTATTTATTTATT	<11.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:15,5:20:77,0,255	0/1:5,3:8:58,0,114	0/1:11,9:20:186,0,246
-chr21	41200191	chr21:41200191:M	AAAAAAAAAAACAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:195,0,196	0/1:11,7:20:81,0,131	0/1:21,18:40:207,0,254
-chr21	41218870	chr21:41218870:M	TTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:25:177,0,255	0/1:23,7:32:87,0,255	0/1:18,9:28:162,0,255
-chr21	41221045	chr21:41221045:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,7:13:104,0,52	0/1:14,6:24:43,0,214	0/1:11,15:30:203,0,135
-chr21	41221828	chr21:41221828:M	AAAAAAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:9:194,14,0	0/1:2,7:10:193,0,31	0/1:0,3:8:81,0,18
-chr21	41223354	chr21:41223354:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,11:29:116,0,234	0/1:17,14:32:159,0,201	0/1:16,13:30:153,0,199
-chr21	41225234	chr21:41225234:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,13:25:173,0,127	1/1:1,25:26:255,59,0	0/1:10,13:25:178,0,106
-chr21	41232869	chr21:41232869:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,5:19:44,0,152	0/1:7,5:12:50,0,85	0/1:8,9:17:109,0,91
-chr21	41242340	chr21:41242340:M	TCTCTCTCTCTCTCTCTC	<10>	.	.	Motif=TC	GT:AD:DP:PL	0/1:22,17:39:202,0,255	0/1:18,20:39:239,0,213	0/1:18,21:40:255,0,219
-chr21	41253442	chr21:41253442:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:60,0,60	0/0:18,0:19:0,55,255	0/1:5,7:13:87,0,52
-chr21	41259442	chr21:41259442:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,26:43:255,0,194	0/0:43,2:45:0,96,255	0/1:26,21:49:245,0,255
-chr21	41265174	chr21:41265174:M	TTTTTTTTTTTTTT	<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,16,0:37:189,0,255,255,255,255	1/2:3,19,10:32:255,127,196,255,0,255	0/1:9,14,0:24:196,0,93,255,138,255
-chr21	41266942	chr21:41266942:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17>,<18>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,13,15:28:255,255,194,236,0,157	1/2:0,14,12:27:255,207,130,248,0,173	1/2:0,17,10:27:255,178,100,255,0,226
-chr21	41279025	chr21:41279025:M	TTGTTTTGTTTTTTTTG	<3.6>	.	.	Motif=TTGTT	GT:AD:DP:PL	0/1:21,30:51:255,0,255	0/1:22,15:37:255,0,255	0/1:27,31:58:255,0,255
-chr21	41286120	chr21:41286120:M	ATAGATAGATAGATAGATAGATAGATAGATAAATAAATGATAGATAGATA	<10.5>,<11.5>,<13.5>,<14.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/4:0,3,0,0,9:12:255,253,246,255,255,255,255,175,233,234,83,0,58,84,57	2/4:0,0,11,0,8:19:255,255,255,222,226,194,255,255,146,255,200,200,0,255,255	1/3:0,11,0,11,0:22:255,207,255,255,255,255,255,0,207,255,255,207,255,255,255
-chr21	41291172	chr21:41291172:M	CACACACACACACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/1:17,15:34:191,0,238	0/0:43,0:43:0,127,255	0/1:26,27:53:255,0,255
-chr21	41308519	chr21:41308519:M	TTTTTGTTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTT	<35>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:82,0,18	0/1:1,0:3:3,0,36	0/1:4,4:9:108,0,91
-chr21	41311252	chr21:41311252:M	ATATATATATATATATATATATATATATATATATATATATATATATGTATATATA	<29.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:1,3:4:52,0,10	.	0/0:0,0:1:0,0,0
-chr21	41312710	chr21:41312710:M	TGTGTGTGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>,<27.5>	.	.	Motif=TG	GT:AD:DP:PL	2/3:0,1,10,7:18:255,255,255,190,172,158,191,164,0,255	1/2:0,15,10,0:25:255,146,101,255,0,188,255,174,255,255	0/3:6,0,0,4:11:97,115,255,115,222,205,0,162,107,151
-chr21	41313801	chr21:41313801:M	TTGTTGTTGTTGTTGTTGTT	<7.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/1:18,17:35:232,0,245	0/1:22,15:37:168,0,255	0/1:20,18:39:229,0,255
-chr21	41314763	chr21:41314763:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,27:41:255,0,131	0/1:17,20:40:232,0,189	0/1:14,20:34:252,0,147
-chr21	41330135	chr21:41330135:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,14:18:208,0,1	0/1:11,13:30:158,0,133	1/1:0,15:17:255,49,0
-chr21	41333132	chr21:41333132:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:32:0,94,255	0/1:17,19:38:226,0,200	0/0:40,6:47:0,29,255
-chr21	41346023	chr21:41346023:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,19:43:255,0,255	0/0:42,0:43:0,126,255	0/1:6,30:47:255,0,30
-chr21	41352797	chr21:41352797:M	AAATAAATAAATAAATAAATAAATAAATAAA	<9.8>,<10.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,20,14:34:255,255,172,255,0,255	0/1:16,6,0:22:102,0,255,107,255,255	2/2:0,0,18:18:255,255,255,54,53,0
-chr21	41355557	chr21:41355557:M	AAACAAACAAACAAACAAACAAACA	<5.2>,<7.2>	.	.	Motif=AAAC	GT:AD:DP:PL	2/2:0,0,36:36:255,255,255,107,108,0	1/2:0,13,16:29:255,255,255,230,0,255	0/2:26,0,24:50:255,255,255,0,255,255
-chr21	41356041	chr21:41356041:M	ACACACACACACACACACACACACACACACACACACACACACACA	<19.5>,<21.5>,<23.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	3/4:0,0,0,11,9:20:255,255,255,255,255,255,153,154,154,95,157,188,187,0,130	1/4:0,14,0,0,9:25:255,255,232,255,255,255,255,158,255,255,255,0,255,255,255	2/3:1,0,4,4,0:11:104,119,239,52,113,94,64,111,0,109,120,193,69,128,199
-chr21	41362741	chr21:41362741:M	TTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,7:7:121,21,0	1/1:0,6:6:99,17,0	0/1:2,3:5:36,0,19
-chr21	41365204	chr21:41365204:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,44:44:255,130,0	1/1:0,30:30:255,88,0	0/1:22,16:38:189,0,255
-chr21	41373806	chr21:41373806:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:5,0:6:0,17,96	0/1:10,3:14:13,0,129	0/1:11,4:15:25,0,145
-chr21	41384839	chr21:41384839:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,4:19:29,0,182	0/1:16,14:32:146,0,200	0/0:23,3:27:0,26,255
-chr21	41386996	chr21:41386996:M	AACAACAACAACAACAA	<4.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:27,20:47:255,0,255	0/1:16,18:34:232,0,191	0/0:41,1:42:0,105,255
-chr21	41389198	chr21:41389198:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,12:29:146,0,204	0/1:13,12:26:135,0,162	0/0:38,2:43:0,87,255
-chr21	41391006	chr21:41391006:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,16,13:30:255,216,255,255,0,255	0/2:12,3,12:27:130,155,255,0,123,161	0/1:7,16,0:23:219,0,57,255,105,255
-chr21	41391779	chr21:41391779:M	TTTTCTTTTTCTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,22:34:255,0,194	0/1:9,28:37:255,0,137	0/0:36,0:39:0,116,255
-chr21	41400704	chr21:41400704:M	TTTATTTATTTATTTATTT	<3.8>	.	.	Motif=TTTA	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,50:50:255,147,0	1/1:0,39:39:255,115,0
-chr21	41401686	chr21:41401686:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,33:34:255,82,0	1/1:3,30:35:255,49,0	1/1:1,40:41:255,103,0
-chr21	41409237	chr21:41409237:M	ACACACACACACACACACACACATACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:1,40:45:255,113,0	1/1:1,31:33:255,79,0
-chr21	41419783	chr21:41419783:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:6:69,1,0	1/1:0,8:9:141,26,0	1/1:1,7:9:108,9,0
-chr21	41420282	chr21:41420282:M	GGGCGGGGGCGCGGGCGCGGGCGCGGGC	<3.7>,<5.7>	.	.	Motif=GGGCGC	GT:AD:DP:PL	0/1:6,13,0:20:255,0,112,255,113,255	1/2:0,14,10:24:255,177,210,255,0,255	0/2:8,0,4:12:40,74,255,0,147,115
-chr21	41424227	chr21:41424227:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<16>,<17>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,2,12:25:169,150,255,0,163,129	1/2:0,9,10:20:255,146,116,165,0,111	0/0:29,0,3:32:0,87,255,40,255,255
-chr21	41429905	chr21:41429905:M	AAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,2:13:30,0,204	1/1:0,5:7:139,9,0	0/1:9,11:21:255,0,197
-chr21	41430452	chr21:41430452:M	TGGGAATGGGACTGGG	<2>	.	.	Motif=TGGGAA	GT:AD:DP:PL	0/1:12,4:16:50,0,250	0/0:29,1:30:0,65,255	0/0:35,2:37:0,63,255
-chr21	41431482	chr21:41431482:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:26,15:42:169,0,255	1/1:2,33:35:255,67,0	0/1:15,19:35:246,0,182
-chr21	41437475	chr21:41437475:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,13:22:182,0,105	0/0:48,1:49:0,126,255	0/1:13,19:32:255,0,146
-chr21	41442007	chr21:41442007:M	GTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGCGCGTGTGTGTGTG	<26.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,9:20:179,0,217	0/0:18,0:19:0,57,255	0/1:15,3:18:29,0,255
-chr21	41448931	chr21:41448931:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>,<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,22,4:26:255,102,37,255,0,255	1/1:0,31,0:31:255,93,0,255,93,255	1/2:0,14,5:20:255,137,97,255,0,255
-chr21	41451835	chr21:41451835:M	AAAAAAAAAAAAAAAAACAAACAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:5:0,11,98	0/1:1,4:7:96,0,11	0/0:9,1:13:0,8,246
-chr21	41462272	chr21:41462272:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:26:255,63,0	1/1:0,15:20:255,53,0	1/1:0,20:21:255,60,0
-chr21	41473915	chr21:41473915:M	GTGAGTGAGGGAGTGAGTGAGGAGTGAGGAGGTGAGGGGGTGAGTG	<12.5>	.	.	Motif=GTGA	GT:AD:DP:PL	0/1:4,6:10:73,0,37	1/1:0,5:5:81,15,0	0/1:5,4:9:41,0,55
-chr21	41483767	chr21:41483767:M	TTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,7,8:16:255,126,100,90,0,91	0/2:2,1,10:14:251,164,163,0,19,17	1/2:2,14,9:25:255,122,88,175,0,199
-chr21	41485082	chr21:41485082:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<15>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/3:0,10,0,3:14:255,45,54,228,83,238,255,0,183,255	1/1:0,30,0,0:31:255,90,0,255,88,255,255,90,255,255	2/3:0,1,10,6:17:255,255,255,108,158,143,255,161,0,255
-chr21	41485653	chr21:41485653:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,13:31:148,0,242	0/0:32,5:37:0,21,255	0/1:13,14:27:173,0,155
-chr21	41495068	chr21:41495068:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,17,16:34:255,249,195,255,0,224	2/2:1,3,23:27:255,255,255,61,27,0	1/2:0,11,14:25:255,212,179,196,0,125
-chr21	41495627	chr21:41495627:M	AAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,8:20:255,127,175,170,0,236	1/2:4,7,5:16:101,26,103,60,0,156	1/1:2,16,0:18:248,17,0,255,48,255
-chr21	41495916	chr21:41495916:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,19:41:218,0,255	0/0:45,2:50:0,109,255	0/1:16,18:38:222,0,189
-chr21	41501609	chr21:41501609:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,8:10:212,0,0	1/1:0,2:3:70,9,0	1/1:0,13:15:255,42,0
-chr21	41513419	chr21:41513419:M	AAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,7,10:18:246,165,233,112,0,153	0/2:12,1,4:17:20,52,255,0,158,172	0/1:12,15,0:28:199,0,135,255,183,255
-chr21	41517991	chr21:41517991:M	TATATATATATATACATACATATATATATATATATA	<20>,<23>	.	.	Motif=TA	GT:AD:DP:PL	1/2:0,9,9:19:255,228,199,199,0,186	0/1:9,5,0:15:77,0,172,114,204,255	1/2:0,7,5:15:255,111,89,154,0,189
-chr21	41518026	chr21:41518026:M	ACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,3:18:30,0,255	0/1:9,4:13:68,0,206	1/1:0,2:2:54,6,0
-chr21	41518038	chr21:41518038:M	ATATATATATATATAATAT	<10.5>	.	.	Motif=AT	GT:AD:DP:PL	0/1:23,7:31:4,0,223	0/0:25,0:26:0,72,255	0/1:14,15:31:106,0,119
-chr21	41518474	chr21:41518474:M	ACACACACACACACACACACACACACACACAAACACGCACACACCACA	<21.5>,<25>,<27.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,1:6:103,117,165,27,27,12,89,137,0,134	2/2:1,0,23,0:24:255,255,255,53,72,0,255,255,72,255	1/3:0,7,0,3:11:255,81,58,255,81,255,207,0,208,199
-chr21	41519884	chr21:41519884:M	AAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,29,18:48:255,255,255,255,0,255	0/2:16,0,7:23:57,123,255,0,239,218	1/1:2,39,0:44:255,92,0,255,125,255
-chr21	41522527	chr21:41522527:M	TTTTTTTTTTAATTTTCATTTTTATTTT	<4.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/1:16,8:24:107,0,255	0/1:19,19:38:255,0,255	0/0:34,0:34:0,102,255
-chr21	41525941	chr21:41525941:M	AAAAAAAAAAAAAACAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,18:30:245,0,111	1/1:0,20:20:255,59,0	0/0:14,0:16:0,44,255
-chr21	41528708	chr21:41528708:M	AAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0,3:27:0,71,255,23,255,255	0/2:14,1,12:30:138,160,255,0,244,185	0/1:13,13,1:29:255,0,255,230,216,255
-chr21	41530831	chr21:41530831:M	TGTGTGTGTGTATGCGTGTGCGTGTGTGTGTGTGTATGTGTGTGTGT	<24.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:11,11:23:147,0,140	0/1:7,7:14:83,0,83	0/0:22,0:23:0,67,255
-chr21	41531638	chr21:41531638:M	TTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,23:32:255,0,126	0/1:16,17:35:255,0,255	1/1:0,43:43:255,129,0
-chr21	41533411	chr21:41533411:M	TAATAATAATAAT	<4>	.	.	Motif=TAA	GT:AD:DP:PL	0/0:18,3:21:0,21,188	0/0:25,2:27:0,50,255	1/1:0,4:6:50,11,0
-chr21	41542198	chr21:41542198:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:4:117,12,0	0/0:2,0:3:0,9,72	0/1:1,4:7:122,0,10
-chr21	41544227	chr21:41544227:M	AAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:18:0,47,255	0/1:9,4:16:68,0,220	0/0:11,0:14:0,36,255
-chr21	41545476	chr21:41545476:M	AGCAAGCAAGCAAGCAAGCAAGCAAG	<8.5>	.	.	Motif=AGCA	GT:AD:DP:PL	0/0:14,0:16:0,42,255	0/0:21,0:21:0,63,255	1/1:0,12:13:255,36,0
-chr21	41545520	chr21:41545520:M	GGAAGGAAGAAAGGGAGGCAGGGAGGAAGGGAAAGGAGGGAAGGAAGGAAGGAAGGGAAAGAAAGAAAGAGAAGGAAGAAAGGA	<16>	.	.	Motif=GGAA	GT:AD:DP:PL	0/0:1,0:1:0,3,25	0/1:2,4:7:85,0,39	0/1:3,4:7:80,0,53
-chr21	41545610	chr21:41545610:M	GAGGGAGGGAGGGA	<3.8>	.	.	Motif=GAGG	GT:AD:DP:PL	0/1:19,13:32:124,0,223	0/1:13,11:24:114,0,146	1/1:0,22:22:255,64,0
-chr21	41547561	chr21:41547561:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,51,0	1/1:0,21:28:255,69,0	1/1:0,18:21:255,45,0
-chr21	41552908	chr21:41552908:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/1:24,20:46:255,0,255	0/0:46,0:47:0,138,255
-chr21	41553411	chr21:41553411:M	AAAAAAAAAAAA	<10>,<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,32,0:32:255,96,0,255,95,255	1/2:0,14,11:25:255,169,127,252,0,182	1/1:0,40,0:40:255,120,0,255,118,255
-chr21	41553576	chr21:41553576:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,29:30:255,255,255,88,90,0	1/2:4,9,18:32:255,255,255,98,0,190	2/2:1,0,32:34:255,255,255,82,99,0
-chr21	41554154	chr21:41554154:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTT	<24>,<33>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,27,0:30:255,89,0,255,89,255	1/2:0,14,16:35:255,255,255,255,0,255	1/1:0,22,0:26:255,77,0,255,77,255
-chr21	41559027	chr21:41559027:M	TAAATAAATAAATAAGTAAATAAATAAATAAATA	<9.5>,<10.5>	.	.	Motif=TAAA	GT:AD:DP:PL	2/2:0,0,23:23:255,255,255,69,68,0	2/2:0,0,18:18:255,255,255,54,53,0	1/2:0,15,11:26:255,206,131,241,0,208
-chr21	41561616	chr21:41561616:M	CTCTCTCTCTCTCTCTCTC	<11.5>	.	.	Motif=CT	GT:AD:DP:PL	1/1:1,14:16:255,21,0	1/1:1,20:25:255,42,0	1/1:2,17:22:255,11,0
-chr21	41561634	chr21:41561634:M	CACACACACACACACAGACACACACACACACACACACACACACACACACACACAC	<25.5>,<26.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,5,9:15:198,88,70,70,0,30	0/2:6,1,9:16:76,74,191,0,60,29	0/2:8,4,8:20:86,30,179,0,49,43
-chr21	41562069	chr21:41562069:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:46,1:48:0,123,255	0/0:47,1:49:0,126,255	0/1:14,25:40:255,0,150
-chr21	41564352	chr21:41564352:M	AAAATAAAATAACATAAAATAAAA	<5>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/1:0,38:38:255,114,0	1/1:0,30:32:255,91,0	0/1:18,15:33:255,0,255
-chr21	41565091	chr21:41565091:M	TTTTTTTTTGTTTGTTTTTCGTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:38,1:39:0,97,255	0/0:34,0:36:0,105,255	0/1:17,12:29:137,0,228
-chr21	41565853	chr21:41565853:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,38:38:255,112,0	1/1:0,38:38:255,112,0	0/1:13,16:29:215,0,159
-chr21	41566112	chr21:41566112:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,24:28:255,72,0	1/1:0,18:25:255,73,0	0/1:15,6:24:114,0,255
-chr21	41566289	chr21:41566289:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:25:255,75,0	1/1:1,33:36:255,77,0	0/1:20,17:43:255,0,255
-chr21	41570145	chr21:41570145:M	AAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:3,0:4:0,12,104	0/0:3,0:4:0,12,101	1/1:0,6:6:181,18,0
-chr21	41572988	chr21:41572988:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:32:255,94,0	1/1:1,40:44:255,106,0	0/1:11,21:32:255,0,108
-chr21	41573374	chr21:41573374:M	AAAAAAAAGAAAGAAAGAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/0:40,0:40:0,118,255	0/1:14,17:31:220,0,166
-chr21	41585357	chr21:41585357:M	ACACAGCACACACACCACACATGCACACCCCACATACACACATACCATACACACACCACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:14,6:20:240,0,255	0/1:15,2:17:50,0,255	0/1:26,8:34:255,0,255
-chr21	41586087	chr21:41586087:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:10:0,30,255	0/0:8,0:10:0,15,210	1/1:1,7:13:207,4,0
-chr21	41590933	chr21:41590933:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,11:27:129,0,182	0/1:8,14:25:202,0,68	0/0:32,1:35:0,84,255
-chr21	41591630	chr21:41591630:M	CCTGTCCCTGTC	<2.2>	.	.	Motif=CCTGTC	GT:AD:DP:PL	0/1:17,8:25:29,0,141	0/0:21,2:23:0,39,235	0/0:13,1:14:0,26,149
-chr21	41591642	chr21:41591642:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,18:22:255,11,0	1/1:1,12:15:196,24,0	1/1:2,11:13:157,3,0
-chr21	41607856	chr21:41607856:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:3,0,6:9:84,108,204,0,47,29	1/2:2,3,2:8:45,5,39,31,0,80	1/2:2,7,9:19:202,127,208,93,0,154
-chr21	41608020	chr21:41608020:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,11:13:209,37,0	1/1:1,16:19:255,37,0
-chr21	41618017	chr21:41618017:M	ACACACACACACACACACACACACACA	<12.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:20,13:33:153,0,255	1/1:0,7:7:127,21,0	0/1:18,9:31:114,0,255
-chr21	41618363	chr21:41618363:M	AAAAAAAAAAAAAAAAAAAAA	<19>,<20>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,1:2:11,14,39,0,17,11	0/0:4,0,0:4:0,12,107,12,76,65	1/2:0,6,5:13:226,70,49,109,0,78
-chr21	41619085	chr21:41619085:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<15.5>,<17.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	3/3:0,0,1,27:28:255,255,255,255,255,255,81,84,64,0	1/3:1,16,1,7:25:255,173,155,255,100,255,255,0,255,255	2/3:2,0,12,13:27:255,255,255,196,227,154,145,214,0,160
-chr21	41621516	chr21:41621516:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,2:34:0,61,255	0/1:16,11:29:110,0,218	0/0:31,1:32:0,76,255
-chr21	41625239	chr21:41625239:M	TTTGTTTGTTTGCTTGCTTGCTTGTTT	<7.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:1,39:40:255,99,0	1/1:0,29:30:255,87,0	1/1:0,39:39:255,115,0
-chr21	41640303	chr21:41640303:M	TTTTCTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTT	<41>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:88,9,0	1/1:0,3:3:88,9,0	1/1:0,3:6:108,13,0
-chr21	41643176	chr21:41643176:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:55,9,0	1/1:0,2:2:34,6,0	0/0:6,0:10:0,10,113
-chr21	41649136	chr21:41649136:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,14:15:255,43,0	0/1:4,9:17:125,0,39	1/1:0,22:22:255,65,0
-chr21	41649300	chr21:41649300:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/2:1,0,2:4:35,44,74,0,15,7	1/2:4,4,4:12:44,10,89,10,0,91	1/2:1,2,5:10:102,90,146,20,0,33
-chr21	41649806	chr21:41649806:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:36,0,36	0/1:4,5:9:59,0,42	0/1:3,10:14:133,0,21
-chr21	41655264	chr21:41655264:M	AAATAAATAAATATAAATAAATAAATAAATAAAAAATAAA	<13.2>,<14.2>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:0,6,7:13:255,134,98,116,0,78	2/2:0,0,2:4:86,66,60,12,11,0	1/1:0,13,0:13:255,39,0,255,38,246
-chr21	41655940	chr21:41655940:M	CACACACACACACACACACACACACACACAC	<17.5>,<18.5>,<21.5>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,6,6,0:15:255,100,66,107,0,96,255,107,131,255	2/3:0,1,2,7:12:252,208,200,194,176,192,53,8,0,39	1/3:0,9,0,4:13:255,107,80,255,106,240,238,0,158,231
-chr21	41655976	chr21:41655976:M	AAAAAAAAAAAAAAAA	<13>,<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21,0:21:255,63,0,255,62,255	1/2:0,5,3:8:195,51,28,84,0,62	1/2:0,12,5:17:255,88,39,209,0,162
-chr21	41657977	chr21:41657977:M	AAAAAAAAAAAAAAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,3:7:30,0,48	0/0:1,0:2:0,6,27	1/1:0,1:1:16,3,0
-chr21	41661694	chr21:41661694:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<19>,<21>	.	.	Motif=TG	GT:AD:DP:PL	0/2:6,0,7:13:158,177,255,0,152,129	0/1:10,12,0:25:255,0,235,255,255,255	1/2:0,10,12:23:255,255,255,255,0,229
-chr21	41672608	chr21:41672608:M	CACACATACACCACACACAGCACTCCCTCACACACACAAACCACACACACACCACAAACACCACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:13,14:27:82,0,255	0/1:14,10:24:44,0,255	0/1:15,9:24:33,0,255
-chr21	41675869	chr21:41675869:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,11:30:96,0,212	0/0:32,1:34:0,82,255	1/1:0,29:32:255,78,0
-chr21	41675879	chr21:41675879:M	AATAATAATAAT	<2.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:18,8:30:118,0,255	0/0:35,0:39:0,117,255	1/1:0,6:11:166,24,0
-chr21	41676677	chr21:41676677:M	TTTTCTTTTTTCTTTCTTTTTTTTCTTTTTTTTTT	<36>,<38>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17,1:18:255,50,0,255,26,255	0/1:12,8,0:21:77,0,155,137,212,255	2/2:0,0,4:4:109,108,107,12,12,0
-chr21	41679699	chr21:41679699:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,17:37:206,0,255	0/0:33,0:35:0,102,255	0/1:21,16:39:194,0,255
-chr21	41680430	chr21:41680430:M	AAAAAAAAAAACAAAACAAACAAAAA	<27>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,17,15:36:255,255,255,255,0,255	0/2:21,1,17:41:255,255,255,0,255,255	0/1:16,16,0:32:200,0,199,255,255,255
-chr21	41693196	chr21:41693196:M	AAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,8:16:181,0,95	0/0:15,0:17:0,45,255	0/1:9,12:24:255,0,186
-chr21	41713084	chr21:41713084:M	TTTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:31:255,0,255	0/1:10,10:24:230,0,227	1/1:0,32:34:255,101,0
-chr21	41723807	chr21:41723807:M	AAAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAGAAAAA	<39>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,17:18:255,35,0	1/1:2,16:18:241,19,0	1/1:2,20:22:255,29,0
-chr21	41725128	chr21:41725128:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:20:0,58,255	0/1:3,3:7:29,0,39	0/0:19,0:19:0,55,255
-chr21	41726444	chr21:41726444:M	TCCTCCTCCCTCTCTCCTTCTTTCTCCTCCTCCTCCTCTTGTTCTTCTTCTTCCTCCTTCCTGCTCCTCCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTC	<15.3>	.	.	Motif=TCC	GT:AD:DP:PL	1/1:0,4:6:163,15,0	1/1:0,1:2:35,3,0	1/1:0,0:2:49,6,0
-chr21	41726591	chr21:41726591:M	CTTCTTCTTCTT	<3>	.	.	Motif=CTT	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,16:19:255,56,0	1/1:0,26:27:255,79,0
-chr21	41728907	chr21:41728907:M	ATGAATGAATGAATGAATGAATGAA	<7.2>	.	.	Motif=ATGA	GT:AD:DP:PL	0/0:42,0:42:0,124,255	0/1:16,14:30:166,0,202	0/0:40,0:40:0,118,255
-chr21	41731772	chr21:41731772:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/0:37,0:37:0,109,255	0/1:17,12:29:121,0,207	0/0:47,1:49:0,126,255
-chr21	41736023	chr21:41736023:M	CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	<13>,<17>,<45>	.	.	Motif=CTT	GT:AD:DP:PL	1/2:0,15,7,1:24:255,190,150,158,0,255,255,185,255,255	2/3:0,0,11,6:17:255,255,255,63,63,30,255,255,0,255	1/1:3,22,0,0:33:255,53,0,255,78,255,255,95,255,255
-chr21	41736057	chr21:41736057:M	TTATTATTATTATTATTATTATTATTATTATTAATATT	<11.7>,<13.7>,<14.7>	.	.	Motif=TTA	GT:AD:DP:PL	2/3:1,0,11,7:19:223,255,255,70,84,31,90,131,0,89	0/3:2,0,1,4:8:71,87,129,36,55,40,0,25,13,26	1/2:2,11,6,1:23:156,56,89,135,0,234,181,62,255,255
-chr21	41749890	chr21:41749890:M	AAAAAAAAAAAAAAAAAAAAGAAAAGAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:4:0,12,69	0/1:5,3:8:27,0,60	0/0:6,1:7:0,3,85
-chr21	41758022	chr21:41758022:M	ATATATATATATATATATATA	<14.5>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,8:10:230,29,0	1/1:0,0:1:14,3,0	1/1:0,5:7:165,21,0
-chr21	41758042	chr21:41758042:M	AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	<15.5>,<16.5>,<19.5>	.	.	Motif=AG	GT:AD:DP:PL	2/2:0,1,16,0:17:167,151,148,44,34,0,217,198,51,255	2/3:0,0,1,6:10:99,113,182,110,160,153,5,4,0,2	1/2:0,5,13,0:18:177,96,81,49,0,3,228,134,56,255
-chr21	41777706	chr21:41777706:M	CACACACATCACACACACACACACACACACACACACACACACACAC	<15>,<19>,<20>	.	.	Motif=CA	GT:AD:DP:PL	2/3:0,0,9,7:16:255,255,255,129,129,82,165,165,0,118	1/3:0,11,0,12:25:255,255,255,255,208,255,255,0,255,255	2/2:0,0,22,0:22:255,255,255,66,66,0,255,255,65,255
-chr21	41778783	chr21:41778783:M	TTTTGTTTTTTTTTTTTTTT	<21>,<28>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,21,0:24:255,52,0,255,70,255	1/2:2,7,4:16:238,133,133,102,0,255	1/1:4,18,0:25:238,5,0,255,70,255
-chr21	41780812	chr21:41780812:M	AGAAAGAAAGGAAAGGAAGAAAGGAAGGAAAGGAAGAAAGAAAGAAAG	<14>	.	.	Motif=AGAA	GT:AD:DP:PL	0/1:4,4:9:76,0,72	0/1:5,8:13:164,0,79	0/0:20,0:20:0,60,255
-chr21	41780859	chr21:41780859:M	GGAGGGAGGGAGGGAG	<1.5>	.	.	Motif=GGAG	GT:AD:DP:PL	0/0:16,1:21:0,26,255	0/1:4,3:8:59,0,86	0/0:39,0:41:0,123,255
-chr21	41780953	chr21:41780953:M	AAGGAAGGAAGGAGGGGAGGGAGGAGAGGGAGGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGG	<14.5>	.	.	Motif=AAGG	GT:AD:DP:PL	0/0:0,0:1:0,0,0	.	1/1:0,3:3:67,9,0
-chr21	41781016	chr21:41781016:M	AGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGGGAGG	<4.8>,<7.8>,<8.8>,<33.8>	.	.	Motif=AGGG	GT:AD:DP:PL	3/4:0,1,1,2,4:8:70,53,88,49,29,46,43,18,31,35,35,50,11,0,70	1/1:0,6,0,0,1:9:171,17,0,170,18,168,172,18,170,173,161,7,160,162,159	2/3:0,0,4,3,0:7:109,129,212,28,37,16,47,49,0,28,129,221,37,49,246
-chr21	41782244	chr21:41782244:M	TTTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:1,0:1:0,3,28	0/1:2,3:5:64,0,39	0/0:5,0:5:0,15,137
-chr21	41783093	chr21:41783093:M	TTTTTTTTTTTGTTTTTTTTTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,12:24:255,211,255,255,0,255	1/2:0,9,10:22:255,176,224,238,0,196	2/2:0,0,26:27:255,255,255,79,78,0
-chr21	41784640	chr21:41784640:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,13:15:255,43,0	1/1:1,12:14:201,24,0	1/1:0,20:23:255,66,0
-chr21	41786173	chr21:41786173:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAGAAAAGAAAAA	<41>,<44>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,3:7:158,75,63,83,0,74	1/2:0,9,5:14:255,117,90,225,0,210	1/1:0,11,0:11:255,33,0,255,33,255
-chr21	41787018	chr21:41787018:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,11,6:18:255,88,55,148,0,156	2/2:1,1,17:20:255,255,255,28,29,0	0/1:9,23,0:32:255,0,65,255,157,255
-chr21	41787320	chr21:41787320:M	ACACACACACACACACACACACACACACACACACACACACACACACA	<17.5>,<24.5>,<26.5>	.	.	Motif=AC	GT:AD:DP:PL	1/3:0,14,1,3:20:255,72,40,255,53,255,255,0,255,255	1/2:2,12,7,0:23:255,83,179,255,0,255,255,209,255,255	3/3:0,0,0,6:6:187,187,187,182,182,178,18,18,18,0
-chr21	41790393	chr21:41790393:M	AAAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,4:12:104,0,107	0/1:3,4:7:92,0,63	0/0:3,0:6:0,12,94
-chr21	41791048	chr21:41791048:M	TTTTTTTTGTTTGTTTTATTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:20:255,59,0	1/1:0,29:29:255,85,0	1/1:0,24:25:255,73,0
-chr21	41793165	chr21:41793165:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,6:14:255,117,80,109,0,88	2/2:0,0,18:20:255,255,255,60,58,0	1/1:0,14,1:15:255,44,0,237,26,234
-chr21	41794539	chr21:41794539:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,2,2:4:82,30,24,35,0,24	0/1:1,3,1:8:85,0,33,46,20,64	2/2:1,0,6:7:88,91,116,3,20,0
-chr21	41797812	chr21:41797812:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:4:28,0,6	0/0:4,0:4:0,12,67	1/1:0,5:8:99,18,0
-chr21	41798025	chr21:41798025:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:30:140,0,191	0/1:22,13:37:129,0,255	0/0:27,1:30:0,69,255
-chr21	41803964	chr21:41803964:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,11:15:157,0,29	0/1:9,12:21:145,0,95	1/1:0,23:27:255,75,0
-chr21	41805703	chr21:41805703:M	CACCACCATCACCACCATAAGCACCACCACCACCA	<45>	.	.	Motif=CAC	GT:AD:DP:PL	0/1:19,10:29:37,0,255	0/1:25,17:42:87,0,255	0/0:17,4:21:0,13,255
-chr21	41805810	chr21:41805810:M	CCATCACCATTACCAACACCATCACCACCAACACAACCACCTCCATCACCATTAACAACACCATCACCA	<4.5>,<10.5>	.	.	Motif=CCATCA	GT:AD:DP:PL	1/2:1,10,4:18:255,35,75,255,0,255	0/1:4,6,0:12:168,0,78,179,46,214	1/2:0,8,5:16:255,57,91,255,0,251
-chr21	41807064	chr21:41807064:M	ACCACCATCTCCACCACTACCTCCACCACCA	<45>	.	.	Motif=ACC	GT:AD:DP:PL	0/0:27,6:33:0,35,255	0/1:17,10:27:26,0,255	0/0:20,4:24:0,29,255
-chr21	41809228	chr21:41809228:M	TTTTTTCTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:20:0,41,255	0/1:6,5:11:53,0,71	0/0:19,0:19:0,56,255
-chr21	41811468	chr21:41811468:M	AAAATAAAATAAAATAAAATAAAATAAAATAA	<5.4>	.	.	Motif=AAAAT	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:16,8:24:75,0,220	0/0:18,0:18:0,53,255
-chr21	41811681	chr21:41811681:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,8:14:255,144,105,88,0,53	1/2:0,8,5:15:255,86,43,152,0,115	1/1:0,15,0:15:255,45,0,255,44,255
-chr21	41816895	chr21:41816895:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,37:41:255,65,0	1/1:0,24:26:255,75,0	1/1:1,27:30:255,67,0
-chr21	41823030	chr21:41823030:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:11:21,0,103	0/0:5,0:7:0,17,94	0/1:5,3:8:29,0,63
-chr21	41836425	chr21:41836425:M	CCTGGCCCTGGCCC	<2.5>	.	.	Motif=CCTGGC	GT:AD:DP:PL	0/0:37,0:37:0,111,255	0/1:19,11:30:189,0,255	0/0:30,0:30:0,90,255
-chr21	41840443	chr21:41840443:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,7:10:93,0,23	0/1:7,4:11:35,0,85	0/1:1,3:5:47,0,3
-chr21	41843951	chr21:41843951:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<22>	.	.	Motif=A	GT:AD:DP:PL	0/2:8,0,5:13:35,71,206,0,93,78	1/2:2,3,4:12:67,42,84,28,0,62	0/0:14,2,0:16:0,17,170,45,176,222
-chr21	41844415	chr21:41844415:M	ACACACACACACACACACACACACACACACACACACACACACACA	<16.5>,<17.5>,<21.5>	.	.	Motif=AC	GT:AD:DP:PL	2/3:0,0,5,5:10:194,149,194,75,133,119,133,75,0,119	1/1:0,5,0,0:7:147,14,0,86,14,73,139,5,77,136	0/2:1,0,4,0:6:116,69,83,0,26,12,119,83,15,131
-chr21	41844710	chr21:41844710:M	ACACACACACACACACACACACACACACACACA	<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,3:4:58,9,0	1/1:0,2:3:37,6,0	1/1:0,0:2:0,0,0
-chr21	41849560	chr21:41849560:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:29:208,0,146	0/1:19,19:39:226,0,218	1/1:0,42:44:255,129,0
-chr21	41863169	chr21:41863169:M	AAAAAGAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:28:46,0,255	0/0:22,0:24:0,59,255	0/1:14,3:18:1,0,202
-chr21	41868038	chr21:41868038:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:33:168,0,203	0/1:10,7:18:77,0,119	1/1:1,17:19:255,38,0
-chr21	41868677	chr21:41868677:M	TTTTCCTTTTTCTTTTTCTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTC	GT:AD:DP:PL	0/0:11,1:12:0,11,250	0/1:6,2:8:24,0,125	1/1:0,10:11:255,32,0
-chr21	41869440	chr21:41869440:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:8:94,5,0	0/1:3,4:7:49,0,31	0/1:7,2:9:9,0,99
-chr21	41874503	chr21:41874503:M	ATATATATATATATATATATATAT	<10.5>,<12.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:1,0,11:12:55,90,252,18,35,0	1/2:0,2,8:13:30,32,142,11,0,13	1/2:0,3,2:6:47,11,27,46,0,52
-chr21	41874526	chr21:41874526:M	TTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:5:108,12,0	1/1:0,0:4:10,3,0	1/1:0,1:6:105,15,0
-chr21	41886660	chr21:41886660:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,94,0	0/1:20,13:35:134,0,244	1/1:2,39:43:255,90,0
-chr21	41889629	chr21:41889629:M	TTTTTTTTCTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,23:37:255,0,135	0/1:20,21:42:255,0,230	0/0:28,2:32:0,57,255
-chr21	41905311	chr21:41905311:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:11:72,0,104	0/1:5,6:12:124,0,101	1/1:0,6:6:156,18,0
-chr21	41908244	chr21:41908244:M	TGTGTGTGTGTGTGTGTGT	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:29,0:29:0,87,255	0/1:8,9:18:208,0,167	0/1:14,8:22:152,0,255
-chr21	41909999	chr21:41909999:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,0:14:0,39,255	0/1:10,21:33:255,0,193	0/1:13,15:34:255,0,255
-chr21	41911389	chr21:41911389:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:16:0,47,255	0/0:6,0:6:0,18,102	0/1:8,3:12:20,0,108
-chr21	41914295	chr21:41914295:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,2:19:0,20,255	0/1:7,13:22:160,0,75	0/1:14,10:27:106,0,189
-chr21	41916665	chr21:41916665:M	ACACACACACACACACACACACACACACACACACACACACAC	<17>,<18>,<20>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,1,27,0:28:255,255,255,84,64,0,255,255,84,255	2/3:0,3,14,9:26:255,255,255,153,189,185,255,187,0,255	1/2:0,14,6,0:20:255,107,48,248,0,190,255,106,248,255
-chr21	41921755	chr21:41921755:M	TGTGTGTGTGTGTAGTGTGTGTGTGTAATGTGTAGTGTGTGTG	<22.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,21:21:255,62,0	0/1:15,13:28:154,0,188	1/1:0,27:27:255,80,0
-chr21	41922150	chr21:41922150:M	TCTTCTTCTTCTTCTT	<3.7>	.	.	Motif=TCT	GT:AD:DP:PL	1/1:0,5:7:134,21,0	0/1:15,3:20:4,0,255	1/1:0,3:5:92,15,0
-chr21	41922164	chr21:41922164:M	TTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,9:14:239,0,23	0/1:19,7:29:125,0,255	1/1:0,13:20:255,6,0
-chr21	41922239	chr21:41922239:M	ACCTCCACCTCC	<2.5>	.	.	Motif=ACCTCC	GT:AD:DP:PL	1/1:0,30:30:255,90,0	0/1:18,15:33:255,0,255	1/1:0,42:42:255,126,0
-chr21	41922477	chr21:41922477:M	TTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26,2:29:255,81,0,255,48,255	1/2:0,12,11:24:255,162,124,217,0,153	1/1:0,26,0:27:255,81,0,255,79,255
-chr21	41923000	chr21:41923000:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,3:40:0,62,255	0/1:13,18:31:225,0,137	0/0:28,3:31:0,37,255
-chr21	41928545	chr21:41928545:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>,<22>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,7:8:208,120,98,24,7,0	0/2:0,0,3:5:71,49,61,0,14,2	1/2:0,4,4:8:209,64,41,65,0,41
-chr21	41929103	chr21:41929103:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,10:24:113,0,179	0/0:40,0:44:0,127,255	0/1:19,19:41:222,0,250
-chr21	41931427	chr21:41931427:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	1/1:0,6:6:104,18,0	0/1:13,9:22:95,0,166
-chr21	41933261	chr21:41933261:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	1/1:0,23:23:255,68,0	0/1:15,22:37:255,0,167
-chr21	41934857	chr21:41934857:M	TTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:33:255,0,255	0/0:29,0:31:0,90,255	0/1:16,17:35:255,0,255
-chr21	41936816	chr21:41936816:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:5,0:5:0,15,145	0/1:1,0:3:17,0,22	0/1:5,7:14:215,0,101
-chr21	41938743	chr21:41938743:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,9:16:135,0,43	0/0:13,2:16:0,12,198	0/1:4,7:13:96,0,42
-chr21	41944522	chr21:41944522:M	AAAAAAAAAAAAAAAAAAAAAGAAAAGAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,1:4:17,26,65,0,28,23	1/1:1,4,0:7:53,0,0,67,14,116	1/2:1,6,3:11:115,35,57,94,0,155
-chr21	41947113	chr21:41947113:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCTCTC	<33.8>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:0,3:4:26,0,0	1/1:0,4:4:49,11,0	0/1:0,4:6:35,0,2
-chr21	41954912	chr21:41954912:M	GTGTGTGTGGTGTGTGTGTGTGGTGTGTGTGTGTGATGTGT	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/0:16,0:16:0,48,255	0/1:10,11:21:255,0,204
-chr21	41956052	chr21:41956052:M	AAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,40:40:255,120,0	1/1:0,15:18:255,50,0	0/1:9,8:17:166,0,193
-chr21	41962113	chr21:41962113:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,79,0	1/1:2,21:23:255,33,0	1/1:1,31:36:255,84,0
-chr21	41968732	chr21:41968732:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:11:198,32,0	0/1:10,3:15:18,0,137	0/1:10,5:16:41,0,139
-chr21	41971967	chr21:41971967:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,1:37:0,91,255	0/0:40,0:42:0,122,255	0/1:19,13:34:140,0,255
-chr21	41978347	chr21:41978347:M	TTTTCTTTTCTTTTTTTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/0:8,0:9:0,26,151	0/1:5,2:7:14,0,64	0/1:6,4:12:46,0,84
-chr21	41982836	chr21:41982836:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,49:53:255,100,0	1/1:1,37:39:255,97,0	1/1:2,39:43:255,80,0
-chr21	41986007	chr21:41986007:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,1:3:8,0,18	0/1:7,4:12:40,0,78	0/0:2,0:3:0,8,43
-chr21	41997576	chr21:41997576:M	AAAAAAAAAAAAAACAAAAAAACAAAAAAACAAAAAAAA	<38>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:27,1:28:0,65,255	0/1:9,9:21:119,0,109
-chr21	42004005	chr21:42004005:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,1:21:0,43,255	0/0:18,4:25:0,2,255	0/1:8,8:16:98,0,98
-chr21	42008541	chr21:42008541:M	AAAAAAAAAAAAAAAAAAAAAAGAAAAAAAGAAAAGAAAAGAAAAAA	<42>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:5:128,15,0	0/1:2,2:4:49,0,48	1/1:0,4:5:125,15,0
-chr21	42010439	chr21:42010439:M	GGGCGGGGCGGGGGGGG	<3.2>	.	.	Motif=GGGCG	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,15:15:255,45,0	0/1:8,5:13:62,0,123
-chr21	42011205	chr21:42011205:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,29:30:255,88,0	0/1:24,16:41:165,0,255	1/1:0,40:41:255,120,0
-chr21	42011707	chr21:42011707:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:35:0,83,255	0/0:26,0:27:0,79,255	0/1:17,17:35:206,0,216
-chr21	42014899	chr21:42014899:M	TTTGTTTTGTTTTGTTTTGTTTTGTTTTTGTTTT	<5.8>	.	.	Motif=TTTGT	GT:AD:DP:PL	1/1:0,37:37:255,110,0	1/1:0,35:35:255,103,0	1/1:0,42:42:255,124,0
-chr21	42015810	chr21:42015810:M	TGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,34:35:255,103,0	1/1:0,36:36:255,106,0	0/1:21,24:45:255,0,255
-chr21	42017479	chr21:42017479:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,1,9:12:155,124,144,14,8,0	2/2:4,5,21:30:255,231,255,18,2,0	1/2:0,6,13:20:255,189,168,113,0,58
-chr21	42024967	chr21:42024967:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13>,<18>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,13,20:34:255,255,255,255,0,255	1/1:0,37,0:39:255,117,0,255,117,255	2/2:0,0,19:23:255,255,255,65,65,0
-chr21	42027690	chr21:42027690:M	TGTGTGTTTGTGGTGTGTGTGTGGTGTGATGTGGCATATGTTGTGTGTTGTGTGGTGTGTGTG	<32>	.	.	Motif=TG	GT:AD:DP:PL	0/0:6,0:8:0,15,50	0/0:7,1:8:0,11,50	0/1:10,5:15:6,0,47
-chr21	42032535	chr21:42032535:M	TTTTTTTTTTGTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/0:32,1:36:0,86,255	0/1:16,15:31:183,0,200
-chr21	42049131	chr21:42049131:M	CAAAAAAAAAAACAAAAACAAAAACAAAAA	<4.8>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:8,15:23:255,0,110	0/1:17,13:31:204,0,255	0/1:13,15:29:248,0,210
-chr21	42053867	chr21:42053867:M	TTTTTTTTTTTTTTTTGTATTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:26:177,0,255	0/1:11,4:16:71,0,249	0/1:14,5:21:76,0,255
-chr21	42069230	chr21:42069230:M	ACACACACACACACACACACACACACACACACACACACA	<25.5>,<28.5>	.	.	Motif=AC	GT:AD:DP:PL	0/2:10,0,5:18:111,130,255,0,255,255	0/2:12,0,2:16:40,59,255,0,255,255	0/1:11,5,0:20:112,0,255,151,255,255
-chr21	42072044	chr21:42072044:M	CAAACAAACAAACAAACAAACAAA	<7>	.	.	Motif=CAAA	GT:AD:DP:PL	0/1:22,21:46:255,0,255	0/1:25,14:40:136,0,255	0/1:20,15:38:190,0,255
-chr21	42073008	chr21:42073008:M	GTGTGTGTGTGTGTGCGCGCGCGCGTGTGTGTGTGTGCGTGTG	<20.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:18,13:32:143,0,234	0/1:8,7:15:77,0,94	0/1:21,10:32:92,0,255
-chr21	42077003	chr21:42077003:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<26.5>,<30.5>,<31.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,3,0:11:225,68,53,161,0,152,200,39,161,191	1/3:0,7,0,4:13:243,50,73,243,50,243,203,0,203,192	2/2:0,0,5,0:8:152,156,167,22,20,0,106,103,21,90
-chr21	42092386	chr21:42092386:M	TTTTTTTGTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:234,0,214	1/1:1,41:42:255,106,0	0/0:38,0:39:0,112,255
-chr21	42104409	chr21:42104409:M	TTTCTTTTCTTTTTTTCTTTTCTTTTTTTTCTTTTTCTTTTCTTTTCTTTTTTTT	<10.8>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:10,10:20:101,0,101	0/0:9,0:9:0,26,143	0/1:8,10:18:107,0,75
-chr21	42109124	chr21:42109124:M	ACCCCCACCCCC	<1.8>	.	.	Motif=ACCCCC	GT:AD:DP:PL	0/1:18,12:30:220,0,255	0/0:31,0:31:0,93,255	0/1:14,7:21:114,0,255
-chr21	42121369	chr21:42121369:M	GTGTGTGTGTGTGTGTGTGATGTATGTGT	<13.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,21:31:255,255,255,188,0,235	0/1:15,17,0:33:230,0,175,255,229,255	0/2:20,1,6:27:34,94,255,0,255,255
-chr21	42122565	chr21:42122565:M	GTGTGTGCGTGCGTGTGTGCATGTGTGTGCATGTGTGTG	<7.2>	.	.	Motif=GTGT	GT:AD:DP:PL	0/1:14,17:31:255,0,255	0/1:14,16:30:255,0,255	0/0:34,0:34:0,102,255
-chr21	42122633	chr21:42122633:M	GTGTGTGTACGTGTGTGTGCATATGTGTGCGTGTGTGTGTGTGTGTGTG	<23.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:12,8:20:81,0,150	0/1:9,10:19:110,0,91	0/0:17,0:17:0,50,255
-chr21	42123481	chr21:42123481:M	GTGTGTGTGTGTGAGTGT	<4>	.	.	Motif=GT	GT:AD:DP:PL	0/1:19,10:34:167,0,255	0/1:20,14:36:255,0,255	0/0:43,0:44:0,132,255
-chr21	42130222	chr21:42130222:M	GTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<14.5>,<15.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,21,14,0:35:255,255,158,255,0,255,255,221,255,255	1/3:2,16,1,20:39:255,255,255,255,255,255,246,0,255,255	2/3:0,0,22,15:37:255,255,255,255,255,164,255,255,0,255
-chr21	42133889	chr21:42133889:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTCGTTTTGTTTTGTTT	<11.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	1/1:0,19:20:255,57,0	1/1:0,12:12:255,36,0	1/1:0,34:34:255,102,0
-chr21	42134781	chr21:42134781:M	TTTTTTTTTTTTTTATATTTTTTT	<23>,<25>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,9:17:255,173,217,128,0,150	1/1:0,24,0:25:255,73,0,255,75,255	1/2:0,11,3:14:215,53,43,197,0,255
-chr21	42138579	chr21:42138579:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:28,3:32:0,38,255	0/1:13,20:33:255,0,133	0/1:20,14:35:153,0,255
-chr21	42149269	chr21:42149269:M	AAATAAATAAGTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA	<10.8>,<13.8>	.	.	Motif=AAAT	GT:AD:DP:PL	2/2:0,0,14:14:255,255,255,41,42,0	1/2:0,6,3:9:199,53,62,156,0,150	1/2:0,9,7:16:255,128,153,234,0,216
-chr21	42161052	chr21:42161052:M	CACAACACACAGACACACAAAGACACGGACAGACACAGATACACACACAGACACACACACACACACACACACACACA	<35.5>,<37.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,16,0:17:255,51,0,255,51,255	1/2:0,7,3:11:233,55,54,178,0,164	1/2:0,6,3:9:200,54,58,153,0,142
-chr21	42161422	chr21:42161422:M	AAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,78,0	0/1:6,18:25:255,0,85	0/1:7,12:20:255,0,132
-chr21	42168322	chr21:42168322:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:6:52,0,11	1/1:0,5:6:94,17,0	1/1:0,4:4:68,12,0
-chr21	42175111	chr21:42175111:M	AAAAAAAAAAAAAAAAGAAAAGAAAAGAAAGAAAAAA	<40>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:5:99,14,0	0/1:3,0:8:17,0,61	0/0:4,0:6:0,4,103
-chr21	42177137	chr21:42177137:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,8:14:208,98,110,60,0,40	0/0:1,0,0:2:0,3,29,3,19,17	1/2:0,0,2:4:38,27,25,9,0,4
-chr21	42185407	chr21:42185407:M	AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,3,8:11:255,139,108,52,0,20	.	1/2:0,2,3:7:137,51,34,43,0,28
-chr21	42189419	chr21:42189419:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,1:29:0,67,255	0/1:27,24:51:255,0,255	0/1:17,27:44:255,0,180
-chr21	42192481	chr21:42192481:M	TTTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,54,255	0/1:13,17:31:255,0,255	0/1:15,18:33:255,0,255
-chr21	42200597	chr21:42200597:M	TTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:25,0:28:0,83,255	0/1:9,5:16:97,0,206	0/0:13,0:16:0,28,255
-chr21	42206352	chr21:42206352:M	AAATAAATAAATAAATAAATAAATAAATAAATAAA	<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/0:32,0:32:0,92,255	0/1:11,4:15:15,0,117	0/1:10,8:18:66,0,97
-chr21	42206874	chr21:42206874:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/0:30,1:31:0,73,255	0/1:19,14:34:147,0,245	0/1:19,18:40:223,0,241
-chr21	42210960	chr21:42210960:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,8:9:122,9,0	0/0:15,2:18:0,7,204	0/1:8,5:14:55,0,96
-chr21	42212706	chr21:42212706:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:15:0,45,255	0/1:4,5:10:109,0,78	0/1:12,6:20:112,0,255
-chr21	42219223	chr21:42219223:M	CCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC	<8.7>	.	.	Motif=CCG	GT:AD:DP:PL	0/0:27,0:27:0,81,255	0/1:13,9:22:189,0,255	0/1:18,18:37:255,0,255
-chr21	42241605	chr21:42241605:M	AAAAAAAAAAAATAACAAAAAAAAAACAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,17:31:255,0,255	0/0:22,0:22:0,66,255	0/1:11,15:28:255,0,213
-chr21	42241821	chr21:42241821:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,10:27:114,0,209	0/0:24,1:27:0,61,255	0/1:9,14:26:196,0,90
-chr21	42241978	chr21:42241978:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:9,0:13:0,29,166	0/1:10,4:15:34,0,122	0/0:7,1:9:0,9,111
-chr21	42243436	chr21:42243436:M	GTGTGTGTGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<24.5>,<26.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,7:18:255,122,152,255,0,243	2/2:0,0,13:16:254,255,255,46,39,0	1/2:0,6,9:15:255,153,214,158,0,128
-chr21	42268363	chr21:42268363:M	GTGTGTGTGTGTGTGTGTGTGTGTGTG	<15.5>,<18.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,10:17:255,255,250,131,0,110	0/2:10,0,11:22:251,255,255,0,226,232	0/1:15,5,0:23:57,0,255,117,255,255
-chr21	42268389	chr21:42268389:M	GCGCGCGCGCGC	<7>	.	.	Motif=GC	GT:AD:DP:PL	1/1:0,12:14:207,40,0	0/1:14,7:25:74,0,142	0/0:21,0:21:0,61,255
-chr21	42270260	chr21:42270260:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,4:5:54,0,3	0/1:7,5:13:53,0,77	0/1:8,3:11:18,0,103
-chr21	42296625	chr21:42296625:M	TTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/2:14,1,11:28:248,255,255,0,243,255	1/2:1,18,16:38:255,255,255,255,0,255	0/1:24,17,0:44:193,0,255,255,255,255
-chr21	42300358	chr21:42300358:M	CACACGCACACACACACATGCACACACACTCACATGGACACACACATACACACACATACACACACATACATGCACACACA	<24>,<25>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,0,4:8:117,54,96,0,53,41	1/1:0,3,0:4:102,9,0,49,8,40	0/1:3,2,1:7:91,0,68,26,66,95
-chr21	42305366	chr21:42305366:M	TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTGTTTT	<8.6>	.	.	Motif=TTTTG	GT:AD:DP:PL	0/0:29,0:29:0,86,255	0/1:12,21:33:255,0,120	0/1:16,9:25:95,0,227
-chr21	42320721	chr21:42320721:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,44:45:255,114,0	0/1:19,14:33:158,0,244	1/1:0,36:36:255,106,0
-chr21	42326738	chr21:42326738:M	AAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,35:37:255,110,0	1/1:0,27:35:255,102,0	1/1:0,33:39:255,114,0
-chr21	42327038	chr21:42327038:M	AAAAAAAAGAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,33:36:255,105,0	1/1:1,35:37:255,91,0	1/1:0,38:39:255,114,0
-chr21	42341434	chr21:42341434:M	TTTTTTTTCTTTTTCTTTTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:1,7:9:120,9,0	0/1:4,7:11:94,0,39
-chr21	42342753	chr21:42342753:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<18>,<19>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:1,15,0:16:255,28,0,255,47,255	1/2:0,1,1:2:41,17,12,15,0,12	1/2:0,5,5:10:204,89,62,77,0,62
-chr21	42359401	chr21:42359401:M	TTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTT	<78>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:224,27,0	1/1:0,7:7:182,21,0	1/1:0,7:7:183,21,0
-chr21	42362901	chr21:42362901:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,5:9:64,0,38	1/1:1,13:18:245,34,0	0/1:5,5:10:58,0,59
-chr21	42368726	chr21:42368726:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/0:30,0:30:0,88,255	0/1:22,17:39:197,0,255
-chr21	42378871	chr21:42378871:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTGTTT	<6.8>,<8.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/2:0,10,14:24:255,255,255,191,0,224	0/2:8,1,6:15:66,90,255,0,105,114	1/2:0,12,5:17:255,93,96,223,0,255
-chr21	42384157	chr21:42384157:M	AAAAAAAAAAAAAA	<13>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,17,0:40:218,0,255,255,255,255	0/2:9,1,14:24:175,225,255,0,115,97	0/1:19,22,1:43:255,0,227,255,255,255
-chr21	42385023	chr21:42385023:M	CCCTCCCTCTCTTCCTCCCTCCCTCCCTTCCTTCCTCCCTCCCTCCCTCCCTTCCTC	<2.2>	.	.	Motif=CCCT	GT:AD:DP:PL	0/1:5,3:8:47,0,91	0/1:3,2:5:31,0,55	0/1:4,1:7:8,0,78
-chr21	42387372	chr21:42387372:M	GTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<20>	.	.	Motif=GT	GT:AD:DP:PL	0/2:16,0,8:25:160,210,255,0,255,255	0/0:16,0,0:16:0,47,255,48,255,255	1/2:1,13,7:22:255,164,141,214,0,255
-chr21	42392561	chr21:42392561:M	ATGAATGAATGA	<4>	.	.	Motif=ATGA	GT:AD:DP:PL	0/1:24,25:49:255,0,255	1/1:0,35:35:255,103,0	0/0:58,0:58:0,171,255
-chr21	42393245	chr21:42393245:M	AAGAAAAAGAAAAAAAAAAAG	<3.3>	.	.	Motif=AAGAAA	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,37:37:255,110,0	1/1:0,43:43:255,128,0
-chr21	42401268	chr21:42401268:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,8:23:84,0,178	0/1:12,9:23:87,0,157	0/0:14,1:16:0,29,238
-chr21	42401422	chr21:42401422:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,8:25:186,0,234	0/1:6,5:19:113,0,131	0/0:24,0:26:0,72,255
-chr21	42402099	chr21:42402099:M	AAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:23,20:45:255,0,255	0/1:9,12:24:255,0,198	0/0:44,0:45:0,135,255
-chr21	42405984	chr21:42405984:M	GGGGGGGGGGGGGG	<12>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:90,9,0	0/0:1,0:1:0,3,30	1/1:0,1:4:43,6,0
-chr21	42408884	chr21:42408884:M	AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAA	<14.8>,<15.8>	.	.	Motif=AAAAT	GT:AD:DP:PL	1/2:0,3,7:10:242,135,107,50,0,29	2/2:0,0,0:1:0,0,0,0,0,0	1/1:0,6,0:6:114,18,0,114,18,114
-chr21	42410779	chr21:42410779:M	CACACACACACACACACAGATAGACACAGAGACACACACATAGCTCACACACATAGACACACACA	<8>,<9>,<31.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,4,0,6:16:70,0,215,63,227,255,9,0,63,70	2/3:3,1,3,4:12:91,56,171,25,137,141,40,30,0,63	0/2:14,0,6,0:20:115,93,255,0,255,255,156,255,218,255
-chr21	42417420	chr21:42417420:M	AAAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,1:6:32,0,73	1/1:0,3:4:100,12,0	0/0:4,0:5:0,15,130
-chr21	42417860	chr21:42417860:M	TTTTTTTTTTCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/1:0,3:5:70,0,10	1/1:0,1:1:29,3,0	0/0:1,0:1:0,3,30
-chr21	42447788	chr21:42447788:M	ACACACACACACACACACACACACACACAGGCACATACACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,23,0:24:255,72,0,255,72,255	0/1:13,7,0:23:164,0,255,195,223,255	1/2:0,3,9:13:215,152,234,84,0,55
-chr21	42450511	chr21:42450511:M	AAAAAAAAAAAAAAAGAAAAAGAAAAAAA	<31>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,9:11:209,3,0	0/1:9,4:14:74,0,197	1/1:0,6:6:161,18,0
-chr21	42458220	chr21:42458220:M	TATTATTATTATTATTATTATTATTATTATTATTA	<8.7>,<12.7>,<15.7>	.	.	Motif=TAT	GT:AD:DP:PL	1/2:0,20,10,0:30:255,190,221,255,0,255,255,255,255,255	1/2:0,13,3,0:16:255,54,45,255,0,255,255,84,255,255	1/3:0,18,0,8:26:255,225,171,255,225,255,255,0,255,255
-chr21	42463782	chr21:42463782:M	AAAAAAAAAAAAAAAAA	<14>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,19,0:34:255,0,255,255,255,255	0/1:6,17,1:32:255,0,143,255,113,255	1/2:1,14,13:33:255,218,255,255,0,255
-chr21	42464909	chr21:42464909:M	AAAAAAAAAAAAAAAAAAGAAAAGAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:13,1:22:0,19,255	0/0:8,0:14:0,30,244	1/1:0,9:16:238,22,0
-chr21	42466459	chr21:42466459:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:13:255,36,0	1/1:0,17:21:255,51,0	0/0:0,0:2:0,0,0
-chr21	42470031	chr21:42470031:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:32,1,0:33:0,79,255,97,255,255	0/2:12,1,15:28:184,244,255,0,161,143	0/1:12,17,0:29:227,0,135,255,186,255
-chr21	42473490	chr21:42473490:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17:20:255,58,0	1/1:0,18:23:255,64,0	1/1:2,20:28:255,43,0
-chr21	42479727	chr21:42479727:M	ACACACACACACACACACACACACACACACACACA	<18.5>,<19.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,13,6:19:255,108,54,200,0,182	0/1:14,13,0:28:143,0,171,188,248,255	1/2:0,15,10:25:255,176,105,225,0,194
-chr21	42480641	chr21:42480641:M	AAAAAAAAAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:23,0,16	0/1:3,3:6:32,0,32	0/0:2,0:2:0,6,34
-chr21	42483990	chr21:42483990:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/1:30,20:50:238,0,255	0/1:14,16:30:201,0,165	0/1:37,23:60:255,0,255
-chr21	42494705	chr21:42494705:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,13,1:29:192,0,150,246,173,255	0/2:5,0,9:14:118,157,255,0,74,47	0/1:17,9,0:26:88,0,235,162,255,255
-chr21	42503249	chr21:42503249:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,7:19:67,0,157	1/1:2,11:14:151,4,0	0/1:9,5:17:38,0,134
-chr21	42512077	chr21:42512077:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,26:28:255,64,0	1/1:2,36:39:255,79,0	1/1:0,51:52:255,153,0
-chr21	42519958	chr21:42519958:M	GTGTGTTTGTGTGTGTGTGTGTGTGTG	<14.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:33,0:36:0,102,255	0/1:15,16:33:182,0,185	0/0:29,0:31:0,88,255
-chr21	42523898	chr21:42523898:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,20:43:247,0,255	1/1:1,27:29:255,67,0	0/1:13,21:36:255,0,141
-chr21	42530596	chr21:42530596:M	ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC	<16>,<18>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,9:15:255,255,248,32,27,0	1/2:0,5,4:9:231,99,80,123,0,107	2/2:0,0,7:7:203,196,191,21,21,0
-chr21	42554983	chr21:42554983:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,0:14:0,40,207	0/1:6,6:13:63,0,49	0/1:14,5:24:11,0,175
-chr21	42557780	chr21:42557780:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,2:32:0,57,255	0/1:24,19:43:208,0,255	0/1:14,25:40:255,0,145
-chr21	42559876	chr21:42559876:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,1,3:15:39,36,193,0,180,255	1/2:0,3,6:9:187,100,76,43,0,25	0/2:11,1,5:17:87,70,217,0,176,255
-chr21	42572678	chr21:42572678:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:15:19,0,210	0/1:7,5:17:75,0,106	0/0:9,1:12:0,6,166
-chr21	42573340	chr21:42573340:M	TCCCCTCCCCT	<2.4>	.	.	Motif=TCCCC	GT:AD:DP:PL	0/1:24,16:40:255,0,255	0/1:9,16:25:255,0,159	0/1:19,21:40:255,0,255
-chr21	42586020	chr21:42586020:M	TATTATTATTATT	<3.7>	.	.	Motif=TAT	GT:AD:DP:PL	0/0:37,0:38:0,104,255	0/1:8,11:19:80,0,44	0/0:22,0:25:0,66,255
-chr21	42586031	chr21:42586031:M	TTTTTTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:15,0,21:40:255,255,255,0,255,255	0/1:5,11,0:18:255,0,100,255,133,255	0/2:11,0,11:27:253,255,255,0,255,255
-chr21	42597880	chr21:42597880:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,1:20:0,41,255	0/1:13,12:26:131,0,138	0/0:28,1:30:0,70,255
-chr21	42605210	chr21:42605210:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,20:24:255,52,0	0/1:7,4:11:36,0,86	0/1:3,4:7:49,0,32
-chr21	42607028	chr21:42607028:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,4:7:72,12,0	1/1:0,10:11:171,29,0	0/1:10,7:19:70,0,134
-chr21	42608302	chr21:42608302:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,41:42:255,105,0	1/1:0,37:37:255,109,0	0/1:18,25:44:255,0,202
-chr21	42608462	chr21:42608462:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAATAAAA	<32>,<34>	.	.	Motif=A	GT:AD:DP:PL	0/2:7,0,4:12:47,78,214,0,107,92	0/1:8,4,1:13:31,0,110,51,98,194	0/2:7,0,5:12:53,87,228,0,104,88
-chr21	42611084	chr21:42611084:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:18,0:18:0,53,255	0/1:11,6:19:49,0,153	0/0:16,0:18:0,52,255
-chr21	42612545	chr21:42612545:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,49:52:255,134,0	1/1:0,35:36:255,106,0	1/1:1,47:48:255,123,0
-chr21	42615907	chr21:42615907:M	CACACACAAATACACATACACCACACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:21,27:48:186,0,255	0/0:26,7:33:0,14,255	0/1:17,24:41:169,0,255
-chr21	42615966	chr21:42615966:M	ACACACACCACGCACCACCCCCACAGCACACAGAAACACATACACACCACACACACA	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:19,26:45:187,0,255	0/1:18,7:25:11,0,255	0/1:11,24:35:192,0,196
-chr21	42625228	chr21:42625228:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:27:255,77,0	1/1:2,27:31:255,53,0	1/1:0,29:29:255,85,0
-chr21	42639292	chr21:42639292:M	ACACACACACACACAC	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/0:48,0:48:0,132,255	0/0:42,0:43:0,114,255	0/1:17,19:40:137,0,98
-chr21	42643307	chr21:42643307:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:29:255,65,0	1/1:3,27:31:255,38,0	1/1:0,41:45:255,131,0
-chr21	42648271	chr21:42648271:M	TTTTCTTTTTGTTTTTGTTTTTGTTTTTTTTTTT	<35>,<37>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,17,5:22:255,128,76,255,0,255	1/1:0,20,0:20:255,59,0,255,60,255	2/2:0,0,17:19:255,255,255,56,56,0
-chr21	42661035	chr21:42661035:M	TTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,4:22:49,0,255	0/1:17,10:31:205,0,255	0/0:30,0:33:0,95,255
-chr21	42670311	chr21:42670311:M	ACACCACACTCACATTCACAC	<4.5>	.	.	Motif=ACACTC	GT:AD:DP:PL	0/1:19,9:34:73,0,252	0/1:22,8:33:45,0,255	0/0:41,0:42:0,120,255
-chr21	42674317	chr21:42674317:M	TTTTTTTTTTTTTTTTT	<18>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:11,1,6:20:138,157,255,0,190,255	1/1:0,7,0:9:124,22,0,123,3,191	0/1:8,7,0:17:80,0,101,125,144,255
-chr21	42684983	chr21:42684983:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,25:45:255,0,243	0/1:28,12:43:139,0,255	0/0:42,0:42:0,124,255
-chr21	42693300	chr21:42693300:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,5:16:59,0,119	0/0:11,1:12:0,18,173	0/1:9,8:17:93,0,111
-chr21	42693962	chr21:42693962:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:222,0,255	0/1:21,22:43:255,0,247	0/0:43,0:43:0,127,255
-chr21	42701431	chr21:42701431:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,20:44:244,0,255	0/0:31,2:34:0,64,255	0/1:16,23:41:255,0,190
-chr21	42704434	chr21:42704434:M	ACACACACACACACACACACACACACACACACACACA	<19.5>,<24.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:1,9,4:16:219,88,76,140,0,227	0/2:9,0,3:15:53,84,226,0,167,242	0/1:10,8,0:20:81,0,137,138,189,255
-chr21	42710409	chr21:42710409:M	AAAAAAAAAAAAAAAAGAAAGAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:32:222,0,132	0/1:7,8:17:97,0,79	0/0:17,1:18:0,35,255
-chr21	42711254	chr21:42711254:M	TTTTGTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,4:21:12,0,230	0/1:9,15:27:199,0,87	0/0:34,0:36:0,105,255
-chr21	42713130	chr21:42713130:M	TTGTTTTTGTTTTTGTTTTTGTTTT	<5.2>	.	.	Motif=TTGTTT	GT:AD:DP:PL	0/1:24,22:46:255,0,255	0/1:18,10:28:99,0,245	0/0:36,0:36:0,106,255
-chr21	42714017	chr21:42714017:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,12:19:185,0,24	0/1:6,3:9:25,0,74	0/0:15,0:18:0,39,255
-chr21	42715189	chr21:42715189:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:8:109,18,0	0/1:3,3:7:42,0,31	0/1:6,5:14:51,0,81
-chr21	42717295	chr21:42717295:M	TTTTTTTTTTTTTTTTTTTTTT	<21>,<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3,0:7:50,0,3,61,15,102	0/2:1,0,3:6:39,49,88,0,13,5	0/1:2,4,0:6:52,0,17,69,29,135
-chr21	42717544	chr21:42717544:M	AAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:27:255,75,0	0/1:17,14:35:255,0,255	0/1:29,11:43:174,0,255
-chr21	42717901	chr21:42717901:M	GTTTGTTTGTTTGTTTGTTTGTTTTGTTTTGTTT	<11.5>	.	.	Motif=GTTT	GT:AD:DP:PL	1/1:0,27:27:255,81,0	0/1:16,14:30:255,0,255	0/1:14,7:21:126,0,255
-chr21	42719640	chr21:42719640:M	AAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,29:30:255,90,0	0/1:5,15:22:255,0,73	1/1:0,14:16:255,42,0
-chr21	42721972	chr21:42721972:M	TTTTTCTTTTCTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:32:255,94,0	0/1:13,18:32:235,0,137	0/1:15,26:41:255,0,154
-chr21	42726594	chr21:42726594:M	ATATATATATATATATATATATATATATATAT	<11.5>,<16.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,5,3:8:126,11,60,119,0,115	1/1:0,2,0:4:51,5,0,50,2,48	0/2:2,0,2:6:4,19,121,0,15,0
-chr21	42726625	chr21:42726625:M	TTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:96,5,0	.	1/1:0,0:3:37,8,0
-chr21	42727078	chr21:42727078:M	AAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:5:92,0,16	0/1:0,1:3:20,0,19	0/0:3,0:5:0,15,117
-chr21	42727490	chr21:42727490:M	TTTTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:254,30,0	1/1:0,9:9:252,27,0	.
-chr21	42729000	chr21:42729000:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:11:56,0,73	0/1:9,5:14:43,0,110	0/0:32,1:35:0,82,255
-chr21	42740444	chr21:42740444:M	AAAAAAAAAAAAAGAAAAGAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,23:37:255,0,144	0/1:11,13:25:159,0,115	0/1:10,12:23:153,0,109
-chr21	42740574	chr21:42740574:M	GATGGATGGGTGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGAATGGATACATAGATGAATGGATGGAT	<15.8>,<16.8>	.	.	Motif=GATG	GT:AD:DP:PL	1/2:0,9,7:16:255,114,68,146,0,101	1/2:0,3,5:10:198,81,58,49,0,26	1/2:0,6,3:11:226,48,23,98,0,72
-chr21	42740705	chr21:42740705:M	TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAACAGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATA	<12.5>	.	.	Motif=TAGA	GT:AD:DP:PL	1/1:0,1:1:37,3,0	.	1/1:0,4:4:152,12,0
-chr21	42751745	chr21:42751745:M	TTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:7:137,17,0	1/1:0,8:9:206,24,0	1/1:0,5:6:130,15,0
-chr21	42754187	chr21:42754187:M	AAAAAAAAAAACAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,14:35:155,0,255	0/1:25,19:45:210,0,255	1/1:0,49:50:255,147,0
-chr21	42759383	chr21:42759383:M	GTGTGTGTGTGTGTGGGAGCGTGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:4,7:11:184,0,75	0/1:8,6:16:141,0,174	0/0:27,0:27:0,81,255
-chr21	42768125	chr21:42768125:M	AGCAGCAGCAGCAG	<4.3>	.	.	Motif=AGC	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,25:25:255,75,0	1/1:0,27:27:255,81,0
-chr21	42769549	chr21:42769549:M	CACACACAGGCACACACACACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:1,3:5:97,0,23	0/1:3,4:7:117,0,83	1/1:0,14:14:255,42,0
-chr21	42774882	chr21:42774882:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,3:17:40,0,255	0/1:1,5:9:145,0,16	0/0:8,0:13:0,38,255
-chr21	42776849	chr21:42776849:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:10:111,0,80	0/0:14,0:15:0,44,255	1/1:0,15:17:255,50,0
-chr21	42780026	chr21:42780026:M	TCTCTCTCTCTCTCTCTCGCTCTCTCT	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	0/0:32,0:32:0,96,255	0/1:14,24:38:255,0,255	0/0:35,0:37:0,105,255
-chr21	42780166	chr21:42780166:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:49,1:51:0,131,255	0/0:37,1:38:0,94,255	0/1:26,13:42:123,0,255
-chr21	42780416	chr21:42780416:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:27,1:29:0,66,255	0/1:12,17:29:215,0,126	0/0:32,1:34:0,81,255
-chr21	42787797	chr21:42787797:M	ATTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<13.8>,<14.8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,7,0:17:163,0,237,125,255,255	0/1:3,3,0:6:74,0,67,51,78,122	0/2:7,0,6:13:157,106,255,0,182,168
-chr21	42788160	chr21:42788160:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,9:32:83,0,255	0/1:16,16:32:188,0,188	0/0:23,3:26:0,22,255
-chr21	42788306	chr21:42788306:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,9:23:96,0,188	0/1:10,12:22:142,0,109	0/1:12,9:24:111,0,147
-chr21	42795971	chr21:42795971:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0:6:0,4,58	0/1:2,3:7:50,0,13	0/1:4,2:6:16,0,50
-chr21	42798803	chr21:42798803:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:12:92,0,47	0/1:12,4:18:17,0,173	1/1:2,23:25:255,38,0
-chr21	42800401	chr21:42800401:M	TGGTGGTGGTGGTGGTGGTGGTGGTGGTG	<7.7>	.	.	Motif=TGG	GT:AD:DP:PL	1/1:0,26:26:255,78,0	1/1:0,31:31:255,93,0	1/1:0,35:35:255,105,0
-chr21	42809780	chr21:42809780:M	CACATGCACAGGTACACATGCACAGGCACATACATGCACA	<5.3>	.	.	Motif=CACATG	GT:AD:DP:PL	0/1:19,4:23:2,0,255	0/0:24,2:26:0,43,255	0/1:18,6:24:34,0,247
-chr21	42809815	chr21:42809815:M	GCACACACACAGGCACACACTCGCACACGCACAGGCACGCACGCACACTCACATGCACACACGCACAAGCACAC	<8.7>	.	.	Motif=GCACAC	GT:AD:DP:PL	0/1:3,14:17:255,0,31	1/1:0,18:19:255,54,0	0/1:5,11:17:255,0,74
-chr21	42811264	chr21:42811264:M	TTTTTTTTAATTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,7:13:94,0,56	0/1:4,14:19:201,0,14	0/0:16,1:18:0,35,255
-chr21	42822490	chr21:42822490:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:21,5:27:11,0,255	0/1:17,10:29:110,0,207	0/0:31,3:35:0,49,255
-chr21	42824262	chr21:42824262:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,2:39:0,80,255	0/1:26,19:46:172,0,255	0/0:33,1:36:0,88,255
-chr21	42824756	chr21:42824756:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,13:27:151,0,153	1/1:2,11:14:159,7,0	0/1:8,13:23:177,0,72
-chr21	42824772	chr21:42824772:M	AAAGAGAGAAAGAAAGAAAGAAGAAAGAGAGAGAGAGAGAAAGAGATAGAAAAAAAAGAAAAGAGAGAGAAAGAA	<18>	.	.	Motif=AAAG	GT:AD:DP:PL	0/1:1,1:4:17,0,10	0/1:2,3:5:40,0,22	0/0:7,0:7:0,21,129
-chr21	42824865	chr21:42824865:M	AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG	<8.5>,<12.5>	.	.	Motif=AGGA	GT:AD:DP:PL	0/2:5,0,14:21:255,255,255,0,73,101	0/0:18,0,0:18:0,50,227,54,255,255	1/2:1,14,10:27:255,227,210,157,0,255
-chr21	42827446	chr21:42827446:M	ATAGATAGATAGATAGATAGAT	<6.5>	.	.	Motif=ATAG	GT:AD:DP:PL	1/1:0,31:31:255,92,0	1/1:0,42:42:255,124,0	1/1:0,40:42:255,118,0
-chr21	42828695	chr21:42828695:M	TGTGTGTGTGTGTGTGTGTGTGT	<10.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:0,35:36:255,105,0	1/1:0,35:38:255,108,0
-chr21	42830326	chr21:42830326:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,18:27:233,0,77	0/1:10,9:20:100,0,107	0/0:33,1:35:0,85,255
-chr21	42831402	chr21:42831402:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:2,6,11:21:234,165,255,88,0,130	1/1:0,13,1:15:226,34,0,247,18,255	1/2:1,7,13:22:255,217,255,105,0,131
-chr21	42832171	chr21:42832171:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	2/2:0,1,14:15:255,236,233,44,26,0	0/2:2,1,5:8:72,54,100,0,17,11	1/2:1,7,12:21:255,159,162,105,0,65
-chr21	42833820	chr21:42833820:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:22,0:25:0,65,255	0/1:10,7:23:58,0,145	0/1:17,5:24:16,0,225
-chr21	42836036	chr21:42836036:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:45,3:48:0,86,255	0/1:16,30:50:255,0,149	0/0:37,1:38:0,94,255
-chr21	42840650	chr21:42840650:M	TGTGTGCGTATGTGGTGTGGTGTGTGTAGTGTAATGTGTGGTGTGTATGTG	<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:8,18:26:255,0,139	0/1:13,12:25:255,0,255	0/1:12,17:29:255,0,236
-chr21	42843407	chr21:42843407:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:0,0:1:0,3,14	1/1:0,0:5:29,6,0	1/1:0,4:4:124,12,0
-chr21	42847038	chr21:42847038:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,42:42:255,124,0	1/1:0,43:43:255,126,0	1/1:0,49:49:255,145,0
-chr21	42848344	chr21:42848344:M	CACACACACACA	<5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:30,0:30:0,89,255	0/1:13,7:20:68,0,175	0/0:42,0:42:0,124,255
-chr21	42849095	chr21:42849095:M	CACACACACACACA	<5>,<8>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,7,1:8:255,20,10,255,0,255	2/2:0,0,7:7:130,151,255,21,21,0	1/1:0,7,0:7:255,21,0,255,21,255
-chr21	42852916	chr21:42852916:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,9:21:106,0,143	1/1:2,19:22:255,20,0	0/1:13,12:27:154,0,156
-chr21	42855128	chr21:42855128:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,7:14:95,0,67	0/1:6,21:28:255,0,21	0/1:13,13:30:162,0,161
-chr21	42864108	chr21:42864108:M	AAAAAAAAAAAAAAAAAAAAAAAGAAAA	<18>,<27>	.	.	Motif=A	GT:AD:DP:PL	0/0:1,0,0:1:0,3,28,3,20,17	1/1:0,6,0:7:179,21,0,179,21,179	2/2:0,0,3:3:49,57,80,9,9,0
-chr21	42870014	chr21:42870014:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:14,0:15:0,44,255	0/1:10,11:21:127,0,111	0/0:24,0:24:0,70,255
-chr21	42871991	chr21:42871991:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,18:40:223,0,255	1/1:0,33:33:255,97,0	0/1:11,16:27:217,0,124
-chr21	42876824	chr21:42876824:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:36,1:37:0,90,255	0/1:18,21:39:255,0,206	0/0:44,0:44:0,130,255
-chr21	42877139	chr21:42877139:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:5:32,0,21	1/1:0,7:7:117,20,0	0/1:2,1:4:15,0,23
-chr21	42877473	chr21:42877473:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	0/2:17,1,11:30:115,170,255,0,234,236	0/1:3,17,2:25:238,0,5,255,2,255	0/0:22,2,2:26:0,40,255,40,255,255
-chr21	42878042	chr21:42878042:M	AAAAAAAAAAAAAAAGAAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,2:13:0,2,152	1/1:1,14:15:221,27,0	0/1:7,5:14:47,0,100
-chr21	42880935	chr21:42880935:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:23:118,0,175	1/1:1,10:14:191,23,0	0/1:13,9:24:94,0,186
-chr21	42881399	chr21:42881399:M	GTTTGTTTGTTTGTTTGTTT	<4>	.	.	Motif=GTTT	GT:AD:DP:PL	0/0:44,0:44:0,130,255	0/1:20,18:38:215,0,252	0/0:35,0:35:0,103,255
-chr21	42883275	chr21:42883275:M	AAAAAAAAAAAAAAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:13:104,0,35	1/1:0,16:16:255,47,0	0/1:10,4:15:26,0,141
-chr21	42883315	chr21:42883315:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,1:16:0,29,243	0/0:16,1:18:0,35,255	0/1:6,14:20:187,0,47
-chr21	42887295	chr21:42887295:M	TTTTTTTTTTTTTTTTTTTTATTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,1:16:0,28,229	0/1:13,5:18:32,0,167	0/1:17,4:21:8,0,233
-chr21	42892254	chr21:42892254:M	AAAAAAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,13,0:21:255,0,167,232,143,255	1/2:0,16,12:30:255,173,120,255,0,211	0/1:10,16,1:28:255,0,202,255,159,255
-chr21	42895979	chr21:42895979:M	TTTTTCTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,4:18:28,0,167	0/1:2,2:5:28,0,20	0/1:13,6:20:56,0,172
-chr21	42896152	chr21:42896152:M	TTTTTTTTTTTTTTTTTTTTTTT	<19>,<20>,<21>	.	.	Motif=T	GT:AD:DP:PL	0/2:6,0,4,0:10:87,69,222,0,163,152,69,219,160,216	1/2:0,4,1,0:5:132,17,2,67,0,53,120,14,66,115	0/3:2,0,0,6:8:147,153,207,102,156,140,0,53,53,34
-chr21	42897407	chr21:42897407:M	TTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTT	<6.4>	.	.	Motif=TTTGT	GT:AD:DP:PL	0/1:12,13:25:178,0,158	1/1:0,28:28:255,82,0	0/0:33,0:33:0,97,255
-chr21	42899439	chr21:42899439:M	TTTTTTGTTTTTTTGTTTTGTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,11:25:138,0,197	1/1:0,33:33:255,97,0	0/1:13,16:29:215,0,159
-chr21	42904492	chr21:42904492:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,1:7:0,2,90	0/1:3,6:9:77,0,25	0/1:9,3:14:25,0,121
-chr21	42905864	chr21:42905864:M	TTTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,9,0:17:206,0,174,162,143,255	1/1:0,24,1:27:255,75,0,255,59,255	0/2:14,3,12:30:165,119,255,0,185,167
-chr21	42907449	chr21:42907449:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4,1:13:91,0,171,64,110,157	1/1:1,9,0:12:254,8,0,178,24,167	0/2:9,0,7:16:78,105,255,0,158,113
-chr21	42909137	chr21:42909137:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,4:8:50,0,31	1/1:0,0:2:22,5,0	0/1:1,1:3:8,0,21
-chr21	42912892	chr21:42912892:M	AAAAAAAAAAAACAAAAAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/1:7,8:15:94,0,77	0/0:21,0:21:0,62,255
-chr21	42914286	chr21:42914286:M	AAAAAAAAAAAAAAGAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,17:23:246,0,43	1/1:1,27:29:255,68,0	0/1:14,11:26:122,0,184
-chr21	42924949	chr21:42924949:M	TTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:12,1,4:18:61,56,240,0,212,255	1/2:0,2,9:11:255,156,126,30,0,3	0/1:14,12,1:27:148,0,176,166,233,255
-chr21	42926241	chr21:42926241:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,17:35:216,0,236	1/1:0,29:29:255,85,0	0/1:21,12:33:123,0,255
-chr21	42928557	chr21:42928557:M	AAAAAAAAAAAAAAAAGAAAAGAAAAAGAAAAA	<39>,<40>	.	.	Motif=A	GT:AD:DP:PL	0/0:4,0,0:4:0,12,114,12,114,114	1/2:0,3,2:5:123,34,19,50,0,36	0/2:5,1,3:9:66,34,147,0,107,113
-chr21	42929186	chr21:42929186:M	TTTCTTTTTTTCTTTCTTTCTTTTTTTCTTTCTTTCTTTCTTTCTTTTTTTC	<15>	.	.	Motif=TTTC	GT:AD:DP:PL	0/1:13,6:19:90,0,255	0/1:2,17:20:255,0,3	0/1:15,7:22:106,0,255
-chr21	42933401	chr21:42933401:M	AAAGAGAGAAGAAAAAGAGAAAGAGA	<4.5>	.	.	Motif=AAAGAG	GT:AD:DP:PL	0/1:21,19:40:255,0,255	1/1:0,32:32:255,96,0	0/1:24,21:45:255,0,255
-chr21	42933679	chr21:42933679:M	AAAAAAAAGTAAAAAAAAAAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,3:9:25,0,76	.	0/0:14,2:17:0,7,191
-chr21	42939258	chr21:42939258:M	TTTTTTGTTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2:4:80,11,0	1/1:0,2:3:71,9,0	1/1:0,4:5:129,15,0
-chr21	42948050	chr21:42948050:M	TTTTTTTTTTTTTT	<11>,<15>	.	.	Motif=T	GT:AD:DP:PL	0/2:25,0,22:49:255,255,255,0,255,255	0/2:19,0,20:41:242,255,255,0,255,225	1/2:1,18,14:37:255,250,255,255,0,255
-chr21	42956741	chr21:42956741:M	TTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,6:10:74,0,33	1/1:1,14:17:235,33,0	1/1:1,4:8:74,4,0
-chr21	42958065	chr21:42958065:M	GAGAGAGAGAGAGA	<8>	.	.	Motif=GA	GT:AD:DP:PL	0/1:9,12:21:170,0,110	0/1:13,14:27:172,0,156	0/0:24,0:24:0,71,255
-chr21	42958896	chr21:42958896:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,12:26:250,0,255	0/1:6,4:14:72,0,139	0/0:30,0:32:0,95,255
-chr21	42959404	chr21:42959404:M	ATTATTATTATTATTATTATTATTCTTATT	<9.7>	.	.	Motif=ATT	GT:AD:DP:PL	1/1:9,8:26:20,2,0	0/1:15,9:33:14,0,9	0/0:22,5:35:0,5,37
-chr21	42960020	chr21:42960020:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,31:34:255,96,0	1/1:0,24:27:255,78,0	1/1:2,31:37:255,70,0
-chr21	42962840	chr21:42962840:M	TTTTCTTTTCTTTTCTTTTCT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:7,6:13:76,0,95	0/1:9,6:15:63,0,118	0/0:19,0:19:0,56,255
-chr21	42966421	chr21:42966421:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,11:23:145,0,135	0/1:12,3:15:8,0,165	1/1:1,23:24:255,53,0
-chr21	42966775	chr21:42966775:M	TTTTTTTTTTTTTTTTTT	<15>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,3:11:187,36,65,143,0,151	0/1:2,11,2:17:255,0,30,255,0,255	2/2:1,0,10:13:163,196,255,11,35,0
-chr21	42969908	chr21:42969908:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,19:24:255,46,0	1/1:0,13:13:223,38,0	1/1:1,20:22:255,46,0
-chr21	42975046	chr21:42975046:M	GCGGGGCGGGG	<3.4>	.	.	Motif=GCGGG	GT:AD:DP:PL	1/1:0,12:12:255,36,0	1/1:0,12:12:255,36,0	1/1:0,16:16:255,48,0
-chr21	42977538	chr21:42977538:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:3:81,9,0	1/1:0,3:5:84,5,0	1/1:0,1:1:27,3,0
-chr21	42978469	chr21:42978469:M	TTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTT	<43>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,6:17:130,0,195	0/1:4,2:8:31,0,108	0/1:7,4:14:97,0,153
-chr21	42982732	chr21:42982732:M	AAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,14,5:19:255,88,34,210,0,195	1/2:1,15,5:21:255,67,24,195,0,206	1/2:2,6,5:14:182,59,57,53,0,86
-chr21	42984066	chr21:42984066:M	GTGTGTGCGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT	<19>	.	.	Motif=GT	GT:AD:DP:PL	1/1:0,23:24:255,71,0	1/1:0,23:23:255,69,0	1/1:0,27:27:255,81,0
-chr21	42984965	chr21:42984965:M	TTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT	<36>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,3:4:60,11,0	.	1/1:0,0:1:10,3,0
-chr21	42986003	chr21:42986003:M	AAAAAAAAAAAAAAATTAAAAAAAAAA	<29>,<30>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,9,7:16:255,126,80,161,0,117	1/2:0,14,7:21:255,120,59,239,0,180	1/1:0,10,0:11:255,30,0,207,32,189
-chr21	42987383	chr21:42987383:M	AAAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:4:65,8,0	.	1/1:0,3:7:121,5,0
-chr21	42987405	chr21:42987405:M	ATATATATATATATATATATATATGTATA	<13>	.	.	Motif=AT	GT:AD:DP:PL	0/1:5,4:12:86,0,104	0/0:8,0:9:0,26,213	0/1:7,3:12:50,0,156
-chr21	42987619	chr21:42987619:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,13:17:233,13,0	1/1:0,8:9:141,24,0	0/1:7,3:10:25,0,97
-chr21	42988049	chr21:42988049:M	TTTTTGTTTTTGTTTTTGTTTTTG	<3.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	1/1:0,9:9:232,27,0	1/1:0,11:11:255,33,0	1/1:0,2:2:52,6,0
-chr21	42990097	chr21:42990097:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:28:255,82,0	1/1:4,23:28:255,12,0	1/1:2,28:30:255,52,0
-chr21	42991734	chr21:42991734:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,31:33:255,78,0	1/1:1,21:22:255,47,0	1/1:1,32:36:255,87,0
-chr21	42993651	chr21:42993651:M	TTTTTTTTGTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,6:10:255,109,80,73,0,44	1/2:0,6,7:14:255,121,81,115,0,76	1/2:0,14,1:21:255,70,20,255,0,201
-chr21	42993726	chr21:42993726:M	TTTTTTTTTCTTTTTTTTTTTTTTT	<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,10:28:255,182,102,255,0,233	1/2:0,10,5:17:255,87,37,200,0,154	1/2:0,10,6:19:255,108,53,216,0,166
-chr21	42994032	chr21:42994032:M	TTTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,0:2:1,1,0	0/1:1,2:6:59,0,17	1/1:0,3:3:86,9,0
-chr21	42994892	chr21:42994892:M	TTTCTTTTCTTTTCTTTTTCTTTCTTCTTTTTTTTTTTTTTTTTTTT	<7.5>	.	.	Motif=TTTCTT	GT:AD:DP:PL	1/1:0,4:7:94,6,0	0/1:1,2:5:39,0,24	0/1:1,2:4:41,0,18
-chr21	42996892	chr21:42996892:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,20:22:255,27,0	1/1:2,30:33:255,52,0	0/1:23,21:44:254,0,255
-chr21	42999475	chr21:42999475:M	TTTTCTTTTCTTTTTTTTTCTTTT	<3.8>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/0:10,0:10:0,30,193	0/0:14,0:14:0,41,253	1/1:0,22:22:255,65,0
-chr21	43001961	chr21:43001961:M	AAATAAATAAATAAATAAATAAATAAA	<6.2>,<7.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/2:1,4,34:53:255,255,255,92,0,37	1/2:1,9,17:36:255,144,255,173,0,181	1/2:0,4,26:40:255,235,255,126,0,84
-chr21	43005535	chr21:43005535:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,26:28:255,63,0	1/1:1,37:41:255,102,0	0/1:16,20:36:255,0,188
-chr21	43008062	chr21:43008062:M	CACACACACACACACACACACACACACACACACACA	<16>,<21>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,27,0:28:255,81,0,255,84,255	1/1:0,16,0:24:255,51,0,255,41,255	1/2:0,14,11:28:255,255,255,255,0,255
-chr21	43009611	chr21:43009611:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:35,6,0	0/1:1,3:6:44,0,11	0/1:0,1:3:12,0,5
-chr21	43011067	chr21:43011067:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:7:79,2,0	1/1:1,4:6:62,0,0	1/1:0,11:12:204,35,0
-chr21	43019085	chr21:43019085:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,11:25:144,0,146	0/1:7,11:18:137,0,68	0/1:6,9:16:116,0,62
-chr21	43019926	chr21:43019926:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,2:5:138,36,21,54,0,39	1/2:0,3,0:6:86,0,7,55,0,46	2/2:0,0,5:6:154,88,71,17,1,0
-chr21	43023630	chr21:43023630:M	TTTTTTTTTTTTATTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14:30:187,0,177	0/1:15,18:33:224,0,171	0/1:13,19:32:255,0,146
-chr21	43028450	chr21:43028450:M	AAAAAAAAAAA	<10>,<12>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,15,16:32:255,255,255,255,0,255	1/2:1,13,26:40:255,255,255,213,0,255	1/2:4,23,21:48:255,255,255,255,0,255
-chr21	43029396	chr21:43029396:M	TTTTTATTTTTTTTTATTTGTTTGCTTTGTTTTTTTTTTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,6:10:193,26,0	1/1:0,3:5:105,14,0	1/1:0,10:12:255,36,0
-chr21	43030261	chr21:43030261:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGCGTGTGTGTG	<17.5>,<20.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,8,9:17:255,235,211,211,0,184	1/2:0,12,11:23:255,255,253,255,0,255	1/2:0,18,16:36:255,255,255,255,0,255
-chr21	43034832	chr21:43034832:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:30:220,0,138	0/1:26,11:37:84,0,255	0/1:24,22:46:255,0,255
-chr21	43035876	chr21:43035876:M	AAATAAATAAATAAATAAATAAATAAATAAATAAATAA	<15.5>	.	.	Motif=AAAT	GT:AD:DP:PL	1/1:0,3:5:91,9,0	1/1:0,2:3:62,6,0	1/1:0,0:2:11,3,0
-chr21	43052881	chr21:43052881:M	AAAAAAAAAAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,8:12:206,0,37	0/1:2,4:8:108,0,46	0/0:0,0:1:0,0,1
-chr21	43053773	chr21:43053773:M	GCCAGGCCAGGC	<1.4>	.	.	Motif=GCCAG	GT:AD:DP:PL	0/0:16,0:16:0,47,255	0/0:19,0:19:0,56,255	0/1:11,7:18:79,0,154
-chr21	43061241	chr21:43061241:M	TTTTCTTTTCTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,12:19:168,0,74	0/1:3,6:11:74,0,42	0/0:18,0:18:0,53,255
-chr21	43061415	chr21:43061415:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:8:0,23,128	0/1:1,1:3:9,0,19	0/1:10,4:14:30,0,137
-chr21	43151297	chr21:43151297:M	CATCCATCCATCCATCCATCCATCCATCCATCCATCCAT	<10.8>	.	.	Motif=CATC	GT:AD:DP:PL	0/0:19,0:19:0,56,255	1/1:0,10:10:183,29,0	0/1:19,13:32:152,0,255
-chr21	43153264	chr21:43153264:M	TTTTTCGTTTTTGTTTTTGTTTTTTTTTTTTTTT	<5.8>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:4,3:8:33,0,52	0/0:5,0:5:0,15,91	0/1:3,1:4:6,0,43
-chr21	43164478	chr21:43164478:M	TTTTTTTTTTTTTTCTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,14,84	0/0:21,2:25:0,38,255	0/1:1,8:11:112,0,7
-chr21	43167835	chr21:43167835:M	AATAATAATAATAATAATAATAATAATAAT	<7.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/0:14,0:14:0,42,255	0/0:15,0:15:0,45,255	0/1:7,9:16:214,0,148
-chr21	43179973	chr21:43179973:M	TGTGTGTGTGTGTGT	<8.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/1:9,5:14:51,0,122	0/0:19,0:19:0,56,255
-chr21	43180141	chr21:43180141:M	TGTGTGTGTGTGTGTGGGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:7,0:7:0,21,134	0/0:16,0:16:0,47,255	1/1:0,3:3:56,9,0
-chr21	43184262	chr21:43184262:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,5:14:51,0,124	0/0:15,0:15:0,44,255	1/1:0,21:21:255,62,0
-chr21	43189691	chr21:43189691:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,35:38:255,76,0	1/1:1,24:25:255,56,0	0/1:16,15:32:171,0,188
-chr21	43190666	chr21:43190666:M	TTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,12,21:34:255,255,255,218,0,255	2/2:0,0,24:27:255,255,255,80,75,0	1/1:1,40,0:41:255,103,0,255,123,255
-chr21	43196331	chr21:43196331:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,27:28:255,64,0	1/1:2,31:34:255,53,0	0/1:21,27:49:255,0,240
-chr21	43198012	chr21:43198012:M	AAAAAAAAAAAGAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,12:26:143,0,182	0/0:30,1:32:0,76,255	0/1:16,11:27:118,0,209
-chr21	43294100	chr21:43294100:M	GTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,9,14:23:255,255,191,165,0,99	0/2:13,1,10:25:243,164,255,0,255,255	1/1:0,32,0:33:255,96,0,255,97,255
-chr21	43298612	chr21:43298612:M	ACACACACACACACA	<8.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:1,35:36:255,87,0	0/1:24,18:42:203,0,255	1/1:0,35:35:255,103,0
-chr21	43351329	chr21:43351329:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<19.5>,<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,16,12,0,0:29:255,217,131,255,0,217,255,182,255,255,255,216,255,255,255	1/3:0,13,1,13,0:27:255,255,255,255,205,255,255,0,205,255,255,223,255,255,255	2/4:0,1,11,0,8:20:255,255,255,230,211,187,255,255,139,255,255,174,0,203,255
-chr21	43357368	chr21:43357368:M	AATAATAATAATAATAATAATAATAATAATAATAATAATAA	<10.7>,<16.7>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:11,17,0:28:255,0,240,255,255,255	1/1:0,22,0:22:255,66,0,255,66,255	0/2:11,0,9:20:214,247,255,0,255,255
-chr21	43360515	chr21:43360515:M	GTGTGTGTGTGTG	<5.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:10,11:22:157,0,129	1/1:0,30:30:255,88,0	0/0:33,0:33:0,97,255
-chr21	43368635	chr21:43368635:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:23,22:45:255,0,255	0/1:21,19:40:220,0,255	0/0:49,0:49:0,144,255
-chr21	43369104	chr21:43369104:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:22,25:47:255,0,255	0/1:14,13:27:154,0,171	0/0:43,3:47:0,83,255
-chr21	43377297	chr21:43377297:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:75,14,0	0/0:11,0:12:0,35,184	1/1:3,16:20:222,9,0
-chr21	43405254	chr21:43405254:M	TATATATATATATATATATATATATAT	<12.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:5,0:5:0,15,81	1/1:0,7:9:121,23,0	0/0:23,1:25:0,56,255
-chr21	43440284	chr21:43440284:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<14>	.	.	Motif=TG	GT:AD:DP:PL	.	1/1:0,4:4:111,12,0	.
-chr21	43465111	chr21:43465111:M	GGGGGGGGGTGGGGGGG	<16>	.	.	Motif=G	GT:AD:DP:PL	1/1:0,3:3:57,9,0	0/1:1,2:3:27,0,9	1/1:0,10:10:184,29,0
-chr21	43468205	chr21:43468205:M	ACACACCACACACCACACACCCCACATACCTCCCACACACACCATACACACACAC	<67.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:5,12:17:100,0,88	0/1:4,8:12:63,0,75	1/1:1,11:12:108,6,0
-chr21	43468430	chr21:43468430:M	CACACAACCACATACACTACACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:7,12:19:90,0,135	0/1:8,8:16:49,0,170	0/1:6,11:17:83,0,114
-chr21	43468503	chr21:43468503:M	CACACACACCACACACCTCACACACA	<67.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:4,12:16:99,0,64	0/1:7,8:15:52,0,147	0/1:2,11:13:95,0,18
-chr21	43468575	chr21:43468575:M	TGTGTGTGTGTGTGGTGTGT	<67.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:18,25:43:177,0,255	0/1:17,11:28:51,0,255	0/1:21,11:32:38,0,255
-chr21	43468662	chr21:43468662:M	GTGTGTGGTGTGTATATGTGTGTGGGGTATGTGTGTGTGTGGTGTGTGCGTGT	<67.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:3,25:28:207,0,1	0/1:3,11:14:86,0,49	0/1:4,11:15:83,0,64
-chr21	43497651	chr21:43497651:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,9:13:129,0,37	0/1:5,8:13:103,0,50	0/1:10,11:21:139,0,121
-chr21	43518130	chr21:43518130:M	CACAGTCACACACAAAGACACACACACACACACACACACACACACACACACACACAGAGACAGACACAGA	<1.7>	.	.	Motif=CACAGA	GT:AD:DP:PL	0/1:2,2:5:44,0,48	0/1:1,1:4:18,0,36	0/1:1,3:6:71,0,23
-chr21	43533147	chr21:43533147:M	AAACAAACAAACAAACAAACAAACAAACAAACAAA	<7.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:6,3:9:31,0,90	0/1:8,8:17:98,0,98	0/1:8,10:18:135,0,97
-chr21	43542110	chr21:43542110:M	AAAAAAAAAAAAAAAAAA	<15>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,4,4:8:211,72,101,125,0,107	0/1:4,7,1:14:254,0,107,189,45,227	1/2:0,9,3:13:255,56,71,255,0,238
-chr21	43548107	chr21:43548107:M	AAAAAAAAACAACAACAAAAAAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,11:17:160,0,62	0/1:3,5:9:64,0,36	0/1:7,6:14:76,0,87
-chr21	43554760	chr21:43554760:M	AAAAAAAAAAAAAAAA	<18>,<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,4,1:9:99,0,62,53,63,127	0/1:9,2,0:12:17,0,222,32,233,255	0/2:4,1,3:8:70,33,121,0,84,91
-chr21	43558011	chr21:43558011:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,9:14:124,0,50	0/1:9,10:20:126,0,97	0/1:6,7:14:85,0,76
-chr21	43576119	chr21:43576119:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,1,11:12:202,176,173,35,18,0	1/2:0,3,8:13:201,109,95,66,0,34	1/2:1,5,8:14:215,96,106,67,0,44
-chr21	43587666	chr21:43587666:M	AAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:9:16,0,64	0/1:4,3:8:27,0,55	0/1:6,3:11:31,0,81
-chr21	43596887	chr21:43596887:M	AAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:12:126,0,98	0/1:5,7:18:142,0,125	0/1:4,6:10:123,0,78
-chr21	43598382	chr21:43598382:M	TTTTTTTGTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,16:25:255,0,129	0/1:8,4:14:67,0,195	0/1:12,15:31:255,0,239
-chr21	43599868	chr21:43599868:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,7:27:69,0,241	0/1:11,3:17:2,0,174	0/1:10,7:17:75,0,128
-chr21	43610436	chr21:43610436:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,28:31:255,55,0	0/1:2,8:13:100,0,34	1/1:1,15:17:247,29,0
-chr21	43616042	chr21:43616042:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,18:35:183,0,123	0/1:13,13:32:102,0,133	0/1:21,2:30:33,0,221
-chr21	43616053	chr21:43616053:M	ATATATATATATATATAT	<11>	.	.	Motif=AT	GT:AD:DP:PL	0/0:35,0:38:0,111,255	0/1:17,10:28:170,0,255	0/1:17,9:31:130,0,255
-chr21	43616931	chr21:43616931:M	AAAAAAAAAAGAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:30,18:50:255,0,255	0/1:18,21:40:255,0,255	0/1:23,15:40:232,0,255
-chr21	43622971	chr21:43622971:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,21:39:255,0,202	0/1:23,22:45:254,0,255	0/1:15,22:37:255,0,164
-chr21	43626868	chr21:43626868:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,20:43:254,0,255	0/1:10,21:34:255,0,77	0/1:13,26:39:255,0,121
-chr21	43631984	chr21:43631984:M	CACACACACACTCCCACACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:7,1:8:0,7,93	0/1:5,3:8:22,0,52	0/1:5,2:7:10,0,56
-chr21	43632872	chr21:43632872:M	TATGTATGTGTGTGTGTGTGTATGTAT	<7.2>	.	.	Motif=TATG	GT:AD:DP:PL	0/1:25,14:47:99,0,170	0/1:24,15:46:93,0,168	0/1:18,10:37:83,0,116
-chr21	43635929	chr21:43635929:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,4:9:54,0,44	0/1:3,7:10:88,0,21	0/1:6,5:12:51,0,78
-chr21	43636192	chr21:43636192:M	AAAGAAAAAAAAGAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAA	<14.2>	.	.	Motif=AAAGA	GT:AD:DP:PL	1/1:0,1:1:27,3,0	0/1:6,6:13:123,0,122	0/0:13,0:13:0,39,255
-chr21	43636890	chr21:43636890:M	AAAACAAAAAAAAAAAAAAAAAAAAGAAATAAAGAAAAA	<37>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,5:7:133,15,0	0/1:2,3:5:65,0,36	0/1:1,5:8:120,0,6
-chr21	43637487	chr21:43637487:M	AAATAAATAAATAAATAAATAAATAAA	<5.8>	.	.	Motif=AAAT	GT:AD:DP:PL	0/1:12,21:33:255,0,135	0/1:11,12:23:151,0,132	0/1:18,12:30:138,0,250
-chr21	43637808	chr21:43637808:M	AAAAAAAAAAAAGAAAGAAAAAA	<24>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7:20:71,0,183	0/1:21,17:38:188,0,255	0/1:16,14:32:179,0,198
-chr21	43641916	chr21:43641916:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,3:12:28,0,100	0/1:3,5:8:61,0,27	0/1:6,4:10:40,0,75
-chr21	43642791	chr21:43642791:M	TTTTCTTTTTTTTTTTTTTTTTTTTTT	<23>,<26>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,4,3:9:140,35,72,98,0,104	0/1:2,3,2:9:76,0,58,54,0,75	1/2:1,7,3:12:215,43,75,166,0,169
-chr21	43652401	chr21:43652401:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,6:10:85,0,23	0/1:3,4:9:55,0,26	0/1:3,2:6:26,0,34
-chr21	43653182	chr21:43653182:M	AAGGGAAAGGAAGGGAAGGGGAAGGGAAGGGAAGGGGAAGGGAAGGGAAGGGGAAGGGAAGGGGAGGGGAGGGGAGGGAAGGGAAGGGA	<14.6>	.	.	Motif=AAGGG	GT:AD:DP:PL	1/1:0,3:3:76,9,0	1/1:0,3:3:74,9,0	1/1:0,3:6:74,9,0
-chr21	43664328	chr21:43664328:M	AAAAAAAAAAAAAAAAAGAAAAAGAAAAAA	<29>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:18:142,0,72	0/1:8,4:13:39,0,97	0/1:11,10:22:122,0,127
-chr21	43666717	chr21:43666717:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6:14:84,0,67	0/1:5,6:13:76,0,51	0/1:10,8:19:95,0,120
-chr21	43667042	chr21:43667042:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:27,19:46:227,0,255	0/1:16,22:38:255,0,175	0/1:16,21:37:255,0,187
-chr21	43675844	chr21:43675844:M	ATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT	<13>	.	.	Motif=ATTTT	GT:AD:DP:PL	0/1:15,12:27:251,0,255	0/1:7,9:16:199,0,146	0/0:17,0:17:0,51,255
-chr21	43680404	chr21:43680404:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,15:31:196,0,203	0/1:12,16:29:212,0,129	0/1:22,16:38:185,0,255
-chr21	43681262	chr21:43681262:M	AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA	<8.8>,<9.8>	.	.	Motif=AGAT	GT:AD:DP:PL	0/2:19,0,10:29:105,162,255,0,255,255	0/1:14,18,0:32:255,0,255,255,246,255	0/2:20,1,15:36:183,217,255,0,255,255
-chr21	43683973	chr21:43683973:M	AAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:10:9,0,97	0/0:7,1:8:0,7,100	0/1:5,4:9:42,0,60
-chr21	43691632	chr21:43691632:M	TTTTTATTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,10:17:132,0,70	0/1:4,5:9:60,0,43	0/1:3,8:12:117,0,19
-chr21	43695170	chr21:43695170:M	TTTTCTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:17,18:35:234,0,216	0/1:21,18:40:210,0,255	0/1:20,17:40:215,0,252
-chr21	43696984	chr21:43696984:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,39:39:255,115,0	1/1:0,42:43:255,126,0
-chr21	43704221	chr21:43704221:M	AAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,1:5:3,0,55	1/1:0,3:3:50,9,0	0/0:3,0:4:0,9,51
-chr21	43704960	chr21:43704960:M	AAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,11:28:226,0,255	0/1:20,11:34:230,0,255	0/1:18,6:25:101,0,255
-chr21	43705728	chr21:43705728:M	AAAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA	<36>,<41>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,5,3:10:130,60,60,69,0,121	1/2:0,2,2:6:85,58,53,31,0,35	1/2:0,6,7:15:255,178,160,103,0,131
-chr21	43706260	chr21:43706260:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<28>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,13:27:160,0,179	0/1:10,15:26:195,0,99	0/1:15,10:26:113,0,195
-chr21	43706593	chr21:43706593:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,6:13:82,0,53	0/1:1,3:5:48,0,2	0/1:6,4:10:39,0,74
-chr21	43706951	chr21:43706951:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:15:29,0,146	0/1:6,6:12:68,0,68	0/1:5,12:18:168,0,37
-chr21	43712199	chr21:43712199:M	AAAAAAAAAAAAAAAAAGAAAGAAAGAAAAAAAAAA	<35>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,9:12:125,0,9	1/1:1,5:6:68,1,0	0/1:5,14:20:194,0,28
-chr21	43713250	chr21:43713250:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,4:14:32,0,119	0/0:9,2:13:0,3,139	0/1:5,6:11:73,0,56
-chr21	43713398	chr21:43713398:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,5:7:67,0,9	0/1:4,1:7:2,0,53	0/1:3,1:8:0,0,58
-chr21	43724682	chr21:43724682:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:26,0:28:0,82,255	0/1:16,12:28:130,0,200	0/0:20,1:22:0,46,255
-chr21	43724841	chr21:43724841:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,0:20:0,60,255	0/1:16,9:32:183,0,255	0/0:33,0:36:0,102,255
-chr21	43726258	chr21:43726258:M	TTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,1:4:6,0,40	0/1:6,3:10:31,0,70	0/0:7,0:7:0,20,119
-chr21	43730103	chr21:43730103:M	TGATTGATTGATTGATTGATTGATTGATT	<5.2>	.	.	Motif=TGAT	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:35,0:35:0,105,255	0/1:18,13:31:255,0,255
-chr21	43733238	chr21:43733238:M	CCCCTCCCCATCCCCACCCC	<2>	.	.	Motif=CCCCAT	GT:AD:DP:PL	0/1:2,6:11:134,0,30	0/1:7,2:14:59,0,149	0/1:2,3:5:61,0,37
-chr21	43736630	chr21:43736630:M	TTTTTTTTTTTTTTTTTTT	<17>,<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:7,0,0:7:0,21,201,21,144,125	0/2:7,0,3:12:16,43,242,0,137,109	0/1:6,3,0:10:60,0,156,51,112,140
-chr21	43738925	chr21:43738925:M	TTTTCTTTTTCTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,0:10:0,29,184	0/0:8,0:9:0,24,140	0/1:7,4:13:36,0,101
-chr21	43750953	chr21:43750953:M	TGTGTGTGCATGTGTGTGTGTGTGTGTG	<13>,<15>,<17>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,17,0,11:28:255,255,255,255,255,255,255,0,255,255	1/2:1,11,17,0:29:255,255,255,170,0,255,255,255,255,255	0/3:21,0,0,15:37:255,255,255,255,255,255,0,255,255,255
-chr21	43752102	chr21:43752102:M	TGTGTGTGTGTGTGTGTGTGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	0/1:12,19:31:250,0,124	0/0:39,0:39:0,114,255	0/1:21,13:35:136,0,255
-chr21	43757976	chr21:43757976:M	TTTTCTTTTTCTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,9:31:71,0,255	0/1:12,4:18:17,0,171	0/0:28,3:31:0,38,255
-chr21	43763884	chr21:43763884:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:12:92,0,39	0/1:6,12:20:163,0,44	0/1:7,12:19:152,0,66
-chr21	43766212	chr21:43766212:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:18:84,0,118	0/0:22,2:25:0,39,255	0/1:11,11:26:155,0,119
-chr21	43770107	chr21:43770107:M	AAAAACAAACAAACAAAAAAACAAAAAAAAA	<34>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,27:27:255,81,0	0/1:9,17:26:255,0,169	0/1:13,15:28:255,0,255
-chr21	43772172	chr21:43772172:M	AGAGAGAGAGAGAGA	<9.5>,<10.5>	.	.	Motif=AG	GT:AD:DP:PL	0/1:25,15,0:42:245,0,255,197,255,255	0/1:10,14,0:24:255,0,169,174,225,255	0/2:25,1,16:42:255,192,255,0,255,255
-chr21	43776445	chr21:43776445:M	GCGGGGCGGGGCGCGGGGCGGGGCGCGGGGCGGGG	<4.6>	.	.	Motif=GCGGG	GT:AD:DP:PL	0/1:16,9:25:169,0,255	0/1:5,13:19:255,0,81	0/0:14,0:14:0,42,255
-chr21	43776956	chr21:43776956:M	TTTCTTTTCTTTCTTTCCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTT	<8.6>	.	.	Motif=TTTCT	GT:AD:DP:PL	1/1:0,1:1:24,3,0	1/1:0,5:5:127,15,0	.
-chr21	43777289	chr21:43777289:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,8:15:99,0,74	0/1:4,4:8:45,0,45	0/0:7,0:8:0,23,132
-chr21	43781099	chr21:43781099:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:30:0,67,255	0/0:26,2:28:0,47,255	0/1:22,19:42:222,0,255
-chr21	43782527	chr21:43782527:M	AAACAAACAAACAAACAAACAAACAAACAAA	<8.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:14,16:30:221,0,182	0/1:13,11:24:129,0,166	0/1:19,12:31:133,0,255
-chr21	43785069	chr21:43785069:M	TGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:9,14:24:255,0,139	0/1:5,7:12:124,0,78	0/0:8,0:10:0,27,198
-chr21	43785978	chr21:43785978:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,13:28:164,0,202	0/1:13,19:33:243,0,144	0/1:13,9:22:102,0,175
-chr21	43788806	chr21:43788806:M	TTGTTGTTGTT	<2.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:14,0:14:0,41,255	0/0:18,0:18:0,53,255	0/1:21,18:39:225,0,255
-chr21	43805277	chr21:43805277:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,11:18:146,0,74	0/1:6,11:19:142,0,58	0/0:16,2:18:0,18,248
-chr21	43818195	chr21:43818195:M	TTTTTTGTTTTTGTTTTTGTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:29:166,0,150	0/1:7,13:20:150,0,54	0/1:10,22:33:255,0,78
-chr21	43820846	chr21:43820846:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:144,0,90	0/1:10,11:21:128,0,111	0/1:8,8:18:103,0,93
-chr21	43821502	chr21:43821502:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,8:29:60,0,255	0/1:9,7:20:82,0,116	0/0:13,1:14:0,23,211
-chr21	43821542	chr21:43821542:M	CCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCACGGTCTCCCTCTC	<7.5>	.	.	Motif=CCTCTC	GT:AD:DP:PL	1/1:0,2:6:70,9,0	0/1:0,1:7:36,0,8	1/1:0,4:5:130,15,0
-chr21	43823565	chr21:43823565:M	AAAAAAAAAAAAAAAAAA	<15>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,8:14:189,139,255,0,160,134	0/2:5,0,7:13:166,119,243,0,133,107	1/2:1,13,2:20:255,10,23,189,0,171
-chr21	43827368	chr21:43827368:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:25:0,74,255	0/0:35,2:38:0,76,255	0/1:19,8:27:69,0,255
-chr21	43827517	chr21:43827517:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,13:17:236,28,0	0/1:7,9:18:117,0,71	1/1:0,15:16:255,47,0
-chr21	43828954	chr21:43828954:M	CCCCCCCCCACCCCCA	<2.3>,<2.5>	.	.	Motif=CCCCAC	GT:AD:DP:PL	1/2:0,19,18:37:255,255,255,255,0,255	0/2:20,0,17:37:255,255,255,0,255,255	0/1:18,19,0:37:255,0,255,255,255,255
-chr21	43836582	chr21:43836582:M	AAACAAACAAACAAACAAACAAACAAAAAAAC	<7>	.	.	Motif=AAAC	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,31:31:255,91,0	0/1:15,23:38:255,0,170
-chr21	43838471	chr21:43838471:M	CAAAAAAAAACCAAACCAAACCAAACCAAAACAAAA	<6.2>	.	.	Motif=CAAAA	GT:AD:DP:PL	1/1:0,27:27:255,80,0	1/1:0,27:27:255,79,0	0/1:15,13:29:158,0,197
-chr21	43840553	chr21:43840553:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:21:130,0,114	0/1:12,10:25:111,0,155	0/0:32,1:35:0,84,255
-chr21	43841445	chr21:43841445:M	TATTTATTTATTTATTTATTTATTTATATATTT	<7.2>	.	.	Motif=TATT	GT:AD:DP:PL	0/1:16,18:34:246,0,208	0/1:14,9:23:95,0,186	0/0:28,0:28:0,83,255
-chr21	43841956	chr21:43841956:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:14,2:17:0,15,216	0/1:21,4:26:7,0,255	0/1:14,15:31:182,0,146
-chr21	43842687	chr21:43842687:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>	.	.	Motif=TG	GT:AD:DP:PL	0/1:10,7:20:72,0,101	0/1:12,17:30:168,0,84	0/0:32,2:40:0,10,255
-chr21	43843376	chr21:43843376:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,4:14:33,0,144	0/0:10,2:13:0,3,148	0/0:29,0:30:0,88,255
-chr21	43843987	chr21:43843987:M	TTTTTTTTTTTTTTTCTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,11:19:148,0,92	0/1:12,13:27:168,0,132	1/1:2,32:34:255,64,0
-chr21	43844676	chr21:43844676:M	AAAAAAAAAAAA	<11>,<13>	.	.	Motif=A	GT:AD:DP:PL	0/2:26,1,18:46:214,255,255,0,255,255	1/2:0,24,12:37:255,208,233,255,0,255	0/0:32,2,0:34:0,64,255,100,255,255
-chr21	43846409	chr21:43846409:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,16:18:253,17,0	1/1:2,12:14:172,7,0	0/1:11,6:19:61,0,149
-chr21	43848256	chr21:43848256:M	TTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT	<9>,<12>	.	.	Motif=TTAT	GT:AD:DP:PL	0/2:9,0,6:15:130,158,255,0,172,221	1/2:0,12,4:16:255,105,71,216,0,255	0/0:16,0,0:16:0,47,255,48,255,255
-chr21	43855411	chr21:43855411:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,10:22:116,0,153	0/1:8,5:17:37,0,127	0/0:32,1:36:0,87,255
-chr21	43856394	chr21:43856394:M	ATATATATATATATATATATATATATATATAT	<11.5>,<13.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:0,3,6:15:120,47,113,0,22,49	1/1:0,3,0:5:108,11,0,82,12,74	0/0:0,0,0:3:0,6,27,6,27,27
-chr21	43857286	chr21:43857286:M	AACAACAACAACAACAACAACAA	<5.7>	.	.	Motif=AAC	GT:AD:DP:PL	0/1:21,16:38:255,0,255	0/1:17,10:27:190,0,255	0/0:32,0:34:0,102,255
-chr21	43857602	chr21:43857602:M	AAACAAACAAA	<1.8>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:16,18:34:251,0,210	0/1:31,25:56:255,0,255	0/1:13,23:36:255,0,139
-chr21	43857902	chr21:43857902:M	AAACAAACAAACAAGCAAAAAAAAAAACCAAACAAA	<9.2>	.	.	Motif=AAAC	GT:AD:DP:PL	0/1:14,10:25:141,0,235	0/1:10,7:17:100,0,166	0/0:16,0:16:0,48,255
-chr21	43858537	chr21:43858537:M	TTTGTTTGTTTGTTTTTTG	<5.8>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,48:48:255,141,0	0/1:24,22:46:255,0,255
-chr21	43861489	chr21:43861489:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,10:20:119,0,110	0/1:7,11:19:130,0,72	0/1:14,10:24:102,0,172
-chr21	43862723	chr21:43862723:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,25:27:255,62,0	0/1:3,9:15:114,0,14	0/1:11,12:23:136,0,119
-chr21	43864121	chr21:43864121:M	AAAAATAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,16,15:31:255,216,255,231,0,255	1/2:0,18,7:27:255,98,107,255,0,255	0/2:13,0,13:27:116,189,255,0,155,116
-chr21	43866121	chr21:43866121:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:11,9:25:170,0,253	0/1:11,7:21:125,0,254	1/1:0,13:15:255,39,0
-chr21	43866200	chr21:43866200:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,11:31:114,0,255	0/1:10,13:25:166,0,114	0/0:46,1:47:0,120,255
-chr21	43888399	chr21:43888399:M	ATATATATATATAT	<6>	.	.	Motif=AT	GT:AD:DP:PL	1/1:0,36:36:255,107,0	1/1:0,41:41:255,121,0	1/1:0,51:51:255,151,0
-chr21	43889287	chr21:43889287:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,17:41:192,0,255	0/1:19,13:33:128,0,242	0/0:25,2:29:0,49,255
-chr21	43890716	chr21:43890716:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,32:35:255,83,0	1/1:2,30:35:255,66,0	1/1:1,40:42:255,105,0
-chr21	43894218	chr21:43894218:M	TTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,14:30:255,0,255	0/1:14,5:24:65,0,255	0/0:24,0:25:0,65,255
-chr21	43895510	chr21:43895510:M	TTTTTTTTTTTTTTTTTTTTT	<19>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,9:12:214,137,128,54,0,19	1/2:1,5,22:30:255,255,255,66,0,12	2/2:2,2,17:21:255,242,255,25,26,0
-chr21	43898886	chr21:43898886:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:31,25:56:255,0,255	0/1:23,26:49:255,0,255	1/1:0,48:49:255,145,0
-chr21	43901321	chr21:43901321:M	AAAAAAAAAAAAAAAAAAA	<17>,<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15,1:20:255,56,0,255,40,255	1/1:0,11,1:12:255,33,0,205,18,172	1/2:0,13,5:18:255,74,35,227,0,177
-chr21	43904056	chr21:43904056:M	GTGTGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGT	<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,11,5:16:255,77,44,197,0,154	1/2:0,13,12:26:255,173,131,230,0,160	2/2:0,2,16:18:255,255,249,52,17,0
-chr21	43905156	chr21:43905156:M	TATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<12.2>	.	.	Motif=TATT	GT:AD:DP:PL	1/1:0,17:17:255,50,0	1/1:0,7:7:128,21,0	1/1:0,15:17:255,46,0
-chr21	43909293	chr21:43909293:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,4:5:56,0,3	0/1:2,2:4:22,0,22	0/1:1,3:4:40,0,6
-chr21	43917922	chr21:43917922:M	GGGTGTGGGTGT	<1.5>	.	.	Motif=GGGTGT	GT:AD:DP:PL	0/1:8,3:11:48,0,183	0/0:9,0:9:0,27,248	1/1:0,2:2:54,6,0
-chr21	43918589	chr21:43918589:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,26:28:255,46,0	0/1:9,11:21:129,0,104	1/1:0,30:30:255,88,0
-chr21	43920208	chr21:43920208:M	TGTGTGTGTGTGTGTGAGAGATTGTGAGTGAGTGTGTGTGTGT	<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,36:36:255,108,0	0/1:16,13:29:255,0,255	1/1:0,29:29:255,87,0
-chr21	43924181	chr21:43924181:M	TTTTTTTGTATTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,16:16:255,47,0	0/1:4,5:13:82,0,35	1/1:0,11:11:200,32,0
-chr21	43926637	chr21:43926637:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<22>,<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,2,0:2:58,6,0,40,6,34	0/2:1,0,3:4:77,49,67,0,27,18	1/1:0,6,0:8:197,24,0,141,23,124
-chr21	43931923	chr21:43931923:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<14>,<19>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,9:22:255,255,236,255,0,241	0/1:9,12,0:22:255,0,214,255,249,255	2/2:0,0,29:29:255,255,255,87,87,0
-chr21	43938086	chr21:43938086:M	TCTCTCTCTCTCTCTCTCTC	<9>	.	.	Motif=TC	GT:AD:DP:PL	0/1:16,21:39:225,0,125	0/0:38,0:38:0,108,255	1/1:0,34:34:255,97,0
-chr21	43938105	chr21:43938105:M	CACACACACACAGACACACACACACACACACACACACTCACAC	<20.5>	.	.	Motif=CA	GT:AD:DP:PL	0/1:14,10:25:66,0,105	0/1:13,12:30:76,0,110	0/0:18,1:21:0,45,227
-chr21	43938317	chr21:43938317:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:5:131,15,0	0/0:1,0:2:0,3,29	1/1:0,2:4:70,9,0
-chr21	43947679	chr21:43947679:M	TTTCTTTTCTTTTCTTTTTTTTTTTT	<5.4>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:11,10:21:144,0,166	0/1:14,8:24:100,0,226	0/0:23,1:24:0,51,255
-chr21	43955900	chr21:43955900:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,1:26:0,58,255	0/1:12,10:23:114,0,138	0/0:31,1:35:0,82,255
-chr21	43965781	chr21:43965781:M	TTTTTATTTTTA	<1.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	0/0:49,0:49:0,147,255	0/1:23,11:34:186,0,255	0/0:40,0:40:0,120,255
-chr21	43972148	chr21:43972148:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:18,13:33:169,0,247	0/1:22,17:39:191,0,255	0/0:46,0:48:0,141,255
-chr21	43975986	chr21:43975986:M	TTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,9:34:192,0,255	0/1:17,16:40:255,0,255	0/0:43,0:45:0,132,255
-chr21	43980276	chr21:43980276:M	AAAAAAAAAAAAAAAACAAAAAAAAA	<27>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,6:6:105,18,0	0/0:5,0:6:0,17,94	0/1:8,3:12:17,0,110
-chr21	43984790	chr21:43984790:M	TCTTTTTTTTTTCTTTTTC	<3.3>	.	.	Motif=TCTTTT	GT:AD:DP:PL	0/1:11,16:27:255,0,173	0/1:14,16:31:255,0,235	0/0:38,0:39:0,115,255
-chr21	43989772	chr21:43989772:M	TTTTTTTTTTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,5,2:9:150,13,21,81,0,76	1/2:0,2,5:7:124,71,65,34,0,14	1/2:1,1,4:6:65,42,64,0,0,0
-chr21	43995336	chr21:43995336:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,8:16:105,0,79	0/1:3,5:8:61,0,28	0/0:21,0:22:0,64,255
-chr21	43998688	chr21:43998688:M	ATATAAATAAATATATATGTATTATATATATATATATAT	<19>	.	.	Motif=AT	GT:AD:DP:PL	0/0:20,3:27:0,13,95	0/0:12,0:14:0,26,83	0/1:6,3:12:13,0,16
-chr21	44006674	chr21:44006674:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:27:0,60,255	0/0:32,0:36:0,105,255	0/1:17,8:25:70,0,228
-chr21	44009589	chr21:44009589:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:34,4:39:0,42,255	0/1:20,13:34:131,0,242	0/0:31,1:33:0,79,255
-chr21	44014384	chr21:44014384:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:34:0,82,255	0/0:47,1:49:0,126,255	0/1:22,22:44:255,0,255
-chr21	44014573	chr21:44014573:M	TTTTTTGTTTGTTTGTTTTTGTTTTTTTTTTTTTT	<37>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:32:0,96,255	0/0:30,0:31:0,90,255	0/1:5,7:13:149,0,98
-chr21	44015611	chr21:44015611:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,1:23:0,49,255	0/0:24,0:29:0,81,255	0/1:20,14:35:158,0,255
-chr21	44018139	chr21:44018139:M	TTTTCTTTTTTTTTTTCTTTTT	<3.5>	.	.	Motif=TTTTCT	GT:AD:DP:PL	0/0:19,0:19:0,57,255	0/0:35,2:37:0,67,255	0/1:18,29:48:255,0,250
-chr21	44018692	chr21:44018692:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:12,1:13:0,20,195	0/0:6,0:6:0,18,101	0/1:9,4:13:31,0,118
-chr21	44022040	chr21:44022040:M	TTTCTTTCTTTTTTTTTTTCTTTC	<7>	.	.	Motif=TTTC	GT:AD:DP:PL	0/0:44,0:45:0,132,255	0/0:24,0:24:0,71,255	0/1:16,19:36:255,0,199
-chr21	44022277	chr21:44022277:M	TTTTTTTTTTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:7:0,20,155	0/0:2,0:4:0,11,85	0/1:4,13:17:255,0,69
-chr21	44025822	chr21:44025822:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<23>,<24>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,6,4:10:255,66,37,98,0,70	1/1:0,6,0:8:190,20,0,123,20,106	1/2:0,5,4:10:255,65,36,91,0,64
-chr21	44030247	chr21:44030247:M	GTGTGTGTGTGTGTGTGT	<10>	.	.	Motif=GT	GT:AD:DP:PL	0/0:48,0:48:0,142,255	0/0:42,0:42:0,123,255	0/1:23,20:44:233,0,255
-chr21	44034326	chr21:44034326:M	CCCCCAACCCCCCCCCCCACCCCC	<3.7>	.	.	Motif=CCCCCA	GT:AD:DP:PL	0/0:4,0:4:0,12,97	0/0:3,0:3:0,9,76	0/1:3,4:8:88,0,52
-chr21	44040771	chr21:44040771:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:20,0:21:0,61,255	0/1:16,4:20:9,0,213	0/1:8,5:14:56,0,99
-chr21	44043210	chr21:44043210:M	TTTTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:4:0,12,114	0/0:2,0:3:0,9,68	0/1:3,4:8:98,0,65
-chr21	44046507	chr21:44046507:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:19,0:23:0,65,255	0/0:11,0:18:0,35,185	0/1:7,5:16:38,0,89
-chr21	44047533	chr21:44047533:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<16>,<18>,<22>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,14,16,0:31:255,255,255,251,0,255,255,255,255,255	0/2:5,1,22,0:29:255,255,255,0,54,15,255,255,96,255	1/3:0,10,0,7:21:255,192,152,255,193,255,210,0,255,255
-chr21	44049879	chr21:44049879:M	TTTTTTTTTTGTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,0:42:0,126,255	0/0:42,0:44:0,126,255	0/1:15,16:34:255,0,255
-chr21	44056948	chr21:44056948:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:49,1:52:0,134,255	0/0:46,0:47:0,138,255	0/1:21,27:48:255,0,248
-chr21	44060276	chr21:44060276:M	TTTTTTTTTTTTTTTTTT	<17>,<19>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,1,4:14:35,47,197,0,97,122	0/2:7,2,4:13:32,35,169,0,67,105	0/1:14,11,0:26:131,0,173,201,209,255
-chr21	44060902	chr21:44060902:M	ATACATACATACATACA	<6.2>	.	.	Motif=ATAC	GT:AD:DP:PL	0/0:26,0:26:0,78,255	0/0:23,0:23:0,69,255	0/1:16,16:32:255,0,255
-chr21	44060916	chr21:44060916:M	ACACACACACACACACACACACACACACACAC	<16.5>,<23.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:12,8,0:20:2,0,19,62,79,255	0/1:13,12,0:27:11,0,15,85,90,255	0/2:11,1,8:25:198,211,237,0,39,255
-chr21	44064304	chr21:44064304:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTGTG	<15>,<20>,<22>	.	.	Motif=TG	GT:AD:DP:PL	0/2:9,0,10,0:21:143,199,255,0,163,103,198,255,138,255	2/3:1,0,8,7:16:197,243,255,104,189,158,122,222,0,193	0/1:12,14,0,0:27:255,0,255,255,212,255,255,212,255,255
-chr21	44076048	chr21:44076048:M	AAAAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/0:30,0:33:0,98,255	0/0:19,0:23:0,67,255	0/1:17,10:30:188,0,255
-chr21	44078441	chr21:44078441:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,2:9:9,0,98	0/1:12,4:18:25,0,161	0/1:9,8:18:87,0,112
-chr21	44085709	chr21:44085709:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,1:38:0,84,255	0/0:35,0:38:0,111,255	0/1:20,22:42:255,0,239
-chr21	44127856	chr21:44127856:M	AAAAAAAAAAAAAAAGAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	.	.	1/1:2,22:26:255,40,0
-chr21	44137693	chr21:44137693:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,4:8:35,0,35	0/1:5,5:11:42,0,42	0/0:4,0:5:0,1,44
-chr21	44193121	chr21:44193121:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,1:2:27,5,0	.	0/1:5,6:13:63,0,67
-chr21	44195083	chr21:44195083:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:10,2:12:0,1,135	1/1:1,7:9:105,10,0	0/0:28,0:30:0,74,255
-chr21	44199396	chr21:44199396:M	AAAAAAAAGAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,7:27:108,0,255	1/1:0,7:7:177,21,0	0/0:30,0:30:0,90,255
-chr21	44205391	chr21:44205391:M	AAAAAAAAAAAAAACAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:34,0,72	0/1:3,2:5:21,0,39	0/0:12,0:12:0,35,223
-chr21	44205747	chr21:44205747:M	TTTTTTTTTGTTTTTTTGTTTTGTTTTTTGTTTTATTTTTTTTTTTTT	<47>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,5:17:41,0,171	1/1:0,3:3:52,9,0	0/0:16,0:17:0,50,255
-chr21	44212356	chr21:44212356:M	TGAGTGAGTGAATGTGGGATGAATGAGTGAGTGA	<1.8>	.	.	Motif=TGAG	GT:AD:DP:PL	0/1:31,4:36:27,0,255	0/1:20,7:28:140,0,255	0/1:24,4:29:65,0,255
-chr21	44215767	chr21:44215767:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/0:6,0:6:0,18,109	1/1:0,3:4:41,1,0	0/0:4,0:6:0,17,94
-chr21	44220790	chr21:44220790:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,6:14:71,0,109	0/1:17,10:27:98,0,223	0/0:29,0:29:0,85,255
-chr21	44222935	chr21:44222935:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,15:22:217,0,66	0/1:10,12:22:148,0,112	0/0:24,0:24:0,71,255
-chr21	44232350	chr21:44232350:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:3:25,0,8	1/1:0,4:4:65,12,0	.
-chr21	44238860	chr21:44238860:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/1:5,6:11:70,0,52	0/1:2,2:6:20,0,31
-chr21	44243129	chr21:44243129:M	CCCCCCCCCCGCCCCCCC	<14>,<17>	.	.	Motif=C	GT:AD:DP:PL	0/2:5,0,7:14:75,111,255,0,82,47	1/2:0,6,9:15:255,136,219,161,0,135	0/0:7,0,0:9:0,23,215,22,134,114
-chr21	44254828	chr21:44254828:M	TTGTTGTTGTTGTT	<3.7>	.	.	Motif=TTG	GT:AD:DP:PL	0/0:33,0:33:0,99,255	0/1:20,14:34:255,0,255	0/0:40,0:40:0,120,255
-chr21	44255506	chr21:44255506:M	AAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,21,0:35:255,0,255,255,255,255	1/2:0,14,7:24:255,188,146,255,0,255	0/0:44,0,0:44:0,132,255,132,255,255
-chr21	44256420	chr21:44256420:M	TTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:6:35,0,35	0/0:3,0:3:0,9,51	0/0:1,0:1:0,3,17
-chr21	44257681	chr21:44257681:M	AAAAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	2/2:0,0,5:6:152,81,64,16,5,0	0/1:2,6,5:15:222,0,46,15,1,55	0/0:9,0,0:12:0,36,255,36,255,255
-chr21	44257694	chr21:44257694:M	AAATAAATAAATAAATAAATAAATAAATAAA	<6.5>,<6.8>,<33.8>	.	.	Motif=AAAT	GT:AD:DP:PL	1/3:0,4,0,3:7:113,33,21,59,30,48,89,0,27,105	1/2:0,6,6,0:12:204,47,14,49,0,14,236,50,50,255	0/0:15,0,0,1:18:0,43,255,36,255,243,39,255,255,255
-chr21	44264447	chr21:44264447:M	TTTTTCTTTTTCTTTTTCTTTTTTTTTT	<34>,<35>	.	.	Motif=T	GT:AD:DP:PL	0/2:13,0,10:23:218,184,255,0,255,255	1/2:0,18,10:28:255,176,96,255,0,238	0/0:19,0,0:19:0,57,255,57,255,255
-chr21	44265035	chr21:44265035:M	TTTTTCTTTTCTTTTTTTTTTTTTTTT	<26>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:120,0,65	1/1:0,10:10:172,29,0	0/0:5,0:5:0,15,89
-chr21	44266470	chr21:44266470:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,18:28:248,0,100	1/1:0,32:32:255,94,0	0/0:26,3:29:0,32,255
-chr21	44268689	chr21:44268689:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,15:18:255,34,0	0/1:2,11:14:150,0,4	0/1:12,8:20:84,0,155
-chr21	44269854	chr21:44269854:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,14:30:169,0,205	0/1:13,13:27:147,0,156	0/0:37,1:40:0,96,255
-chr21	44270162	chr21:44270162:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,5:9:65,0,47	0/1:1,6:8:81,0,6	0/0:18,0:19:0,56,255
-chr21	44271133	chr21:44271133:M	CTTTTCTTTCTTTTCTTTTCTTCTCTTTTTTTTTTTT	<7.2>	.	.	Motif=CTTTT	GT:AD:DP:PL	0/1:14,12:27:133,0,157	1/1:1,22:25:255,55,0	0/0:20,0:22:0,61,255
-chr21	44276240	chr21:44276240:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,19:41:234,0,255	1/1:3,31:38:255,57,0	0/0:31,2:33:0,61,255
-chr21	44277413	chr21:44277413:M	TTTTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,2:9:10,0,91	0/1:7,3:11:19,0,98	0/1:1,2:5:23,0,18
-chr21	44278068	chr21:44278068:M	TTTTCTTTTCTTTTCTTTTCTTTCTTTTTTTT	<5.2>	.	.	Motif=TTTTC	GT:AD:DP:PL	0/1:14,18:32:255,0,255	0/0:29,0:30:0,87,255	0/1:9,22:32:255,0,148
-chr21	44278712	chr21:44278712:M	TTATTTTATTTTATTTATTTTATTTTATTTTATATTTTATTTTATTTTATTTTATTTTATTTTATT	<12.2>,<14.2>	.	.	Motif=TTATT	GT:AD:DP:PL	0/1:2,5,0:7:77,0,18,95,33,161	0/2:3,0,3:7:37,54,124,0,46,37	0/1:8,4,0:13:40,0,116,74,128,230
-chr21	44280278	chr21:44280278:M	AAAAGAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:169,0,225	0/0:40,0:42:0,122,255	0/1:21,18:40:209,0,255
-chr21	44303434	chr21:44303434:M	AAAAAAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3:4:108,12,0	1/1:0,4:4:115,12,0	.
-chr21	44308560	chr21:44308560:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,9:10:145,11,0	0/1:7,6:15:62,0,92	0/0:9,2:14:0,4,151
-chr21	44311151	chr21:44311151:M	CACACACAGACACACACACAGAGACAGACACGTGCACAAACACACACATGCAGACACACAGACATGCACACAGACGCACACACACACA	<11>,<28>	.	.	Motif=CA	GT:AD:DP:PL	0/2:2,1,3:6:81,63,106,0,23,37	0/1:2,3,1:6:64,0,37,40,16,83	0/2:2,0,2:4:53,59,104,0,46,40
-chr21	44337084	chr21:44337084:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/0:21,0:26:0,76,255	0/1:13,8:24:137,0,255	0/0:29,0:33:0,98,255
-chr21	44343669	chr21:44343669:M	AAAAAAAGAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:13,23:37:255,0,255	0/0:47,0:48:0,144,255
-chr21	44344383	chr21:44344383:M	AAAAAAAAAAAAAAAAAAAA	<14>,<16>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/3:1,12,0,5:20:255,71,105,255,141,255,255,0,255,255	2/3:0,0,10,2:13:255,255,255,44,65,34,255,255,0,255	1/3:1,10,0,7:18:255,104,170,255,200,255,252,0,255,246
-chr21	44356532	chr21:44356532:M	TTTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,8:12:192,0,31	0/1:11,2:15:15,0,254	0/1:4,8:14:182,0,69
-chr21	44360569	chr21:44360569:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,12:26:145,0,181	1/1:0,18:19:255,55,0	0/1:13,12:26:140,0,167
-chr21	44362349	chr21:44362349:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/1:7,9:19:116,0,74	0/1:2,4:7:59,0,15
-chr21	44381936	chr21:44381936:M	GATATGATAGATAGATGGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATGATAGATAGATAG	<15.2>,<17.2>	.	.	Motif=GATA	GT:AD:DP:PL	1/2:0,12,8:20:255,213,177,255,0,255	2/2:0,0,14:14:255,255,255,42,42,0	1/2:0,12,4:16:255,107,71,255,0,255
-chr21	44389874	chr21:44389874:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,11:25:137,0,158	0/0:23,2:25:0,38,255	0/1:19,19:40:245,0,227
-chr21	44394318	chr21:44394318:M	TTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,71	0/0:7,0:8:0,12,107	0/1:1,3:4:40,0,6
-chr21	44398207	chr21:44398207:M	TTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,15:31:198,0,181	1/1:0,20:21:255,51,0	0/1:18,12:31:129,0,247
-chr21	44403956	chr21:44403956:M	ACATACATACACACATGCACATACACATGCATACACACATACA	<9.8>	.	.	Motif=ACAT	GT:AD:DP:PL	0/1:16,11:27:86,0,158	1/1:0,18:20:255,51,0	0/1:13,9:22:69,0,126
-chr21	44404283	chr21:44404283:M	CATACACATATACATGCACACATACATGCACATACACATATACACACATGCATACACATACAAATACATGCAGACACATACA	<1.8>	.	.	Motif=CATACA	GT:AD:DP:PL	0/1:7,2:9:69,0,140	0/0:8,0:8:0,24,188	0/1:7,4:11:159,0,134
-chr21	44404370	chr21:44404370:M	CACACATACATACACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:16,8:25:88,0,237	1/1:0,14:14:255,41,0	0/1:22,6:28:33,0,255
-chr21	44407132	chr21:44407132:M	TTCCTCCCTTCCTCCCTTCCTTCCTTCC	<33.8>	.	.	Motif=TTCC	GT:AD:DP:PL	1/1:0,3:3:36,8,0	1/1:0,2:2:24,5,0	1/1:0,1:1:12,3,0
-chr21	44407451	chr21:44407451:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,2:7:60,0,66	1/1:0,6:7:184,21,0	0/1:5,4:10:95,0,113
-chr21	44408655	chr21:44408655:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,4:13:40,0,92	1/1:0,9:10:148,27,0	0/1:3,7:10:89,0,22
-chr21	44430906	chr21:44430906:M	AATATAAATATA	<2.7>	.	.	Motif=AATATA	GT:AD:DP:PL	0/1:25,20:45:255,0,255	1/1:0,29:29:255,87,0	0/1:19,18:37:255,0,255
-chr21	44430965	chr21:44430965:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/1:24,22:47:255,0,255	1/1:1,32:35:255,74,0	0/1:23,16:40:177,0,255
-chr21	44445440	chr21:44445440:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,17:38:210,0,226	0/1:20,18:39:198,0,243	0/1:20,11:31:105,0,255
-chr21	44446004	chr21:44446004:M	AAAAAAAAAACAAAACAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,25:40:255,0,166	0/1:12,19:32:246,0,129	0/1:26,19:45:218,0,255
-chr21	44446922	chr21:44446922:M	AAAAAAAAAAAAAAAAAGAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,9:18:110,0,93	0/1:6,5:13:61,0,67	0/1:6,9:18:117,0,65
-chr21	44448242	chr21:44448242:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,0:2:5,0,11	0/1:2,3:6:42,0,15	1/1:0,2:2:33,6,0
-chr21	44453121	chr21:44453121:M	CAAAAACAAAAACAAAAACAAAAACAAACAAACAAAAA	<7>	.	.	Motif=CAAAAA	GT:AD:DP:PL	0/1:15,18:39:255,0,242	0/1:10,11:29:182,0,166	0/1:13,10:31:155,0,228
-chr21	44468366	chr21:44468366:M	ATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT	<8>	.	.	Motif=ATTT	GT:AD:DP:PL	0/1:10,11:21:246,0,217	0/1:5,10:15:233,0,96	0/1:8,6:14:126,0,183
-chr21	44535897	chr21:44535897:M	AAAAAAAAAAAAAGGAAAAAAGAAAAAAAAAAA	<31>,<32>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,21,0:22:255,66,0,255,65,255	1/2:1,13,11:25:255,143,127,206,0,154	0/1:5,5,1:12:123,0,105,82,72,140
-chr21	44538423	chr21:44538423:M	CCCCCCCCCCCCCC	<12>,<13>	.	.	Motif=C	GT:AD:DP:PL	.	1/1:0,10,1:12:255,33,0,195,18,165	1/2:0,1,4:5:83,58,55,17,0,3
-chr21	44542743	chr21:44542743:M	AAAAAAAAAAAAAAAAGAAAAAGAAAAGAAAAAAGAAAAAGAAAAAAA	<49>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,6:14:74,0,82	1/1:2,10:13:143,5,0	1/1:1,5:7:77,3,0
-chr21	44551494	chr21:44551494:M	GTGAGTGAGTGAGTGTGTGTGTGAGTGTGTGAGTGAGTGTGTGTGTGAG	<15.2>	.	.	Motif=GTGA	GT:AD:DP:PL	1/1:0,13:13:255,39,0	1/1:0,9:9:234,27,0	1/1:0,19:19:255,57,0
-chr21	44572835	chr21:44572835:M	ACACACACACACACACACACACACACACACACACACACACACACACACACAC	<22>,<23>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,12:15:255,221,196,26,27,0	1/2:0,10,8:18:255,132,80,164,0,112	2/2:0,0,9:9:255,177,152,27,26,0
-chr21	44582989	chr21:44582989:M	TTTTTCTTTCTTTCTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:25:255,74,0	1/1:0,37:37:255,109,0	1/1:0,33:33:255,98,0
-chr21	44583184	chr21:44583184:M	CTGAGTGAGCTGAGCTG	<3.6>	.	.	Motif=CTGAG	GT:AD:DP:PL	1/1:0,34:34:255,102,0	1/1:0,23:23:255,69,0	1/1:0,37:37:255,111,0
-chr21	44588754	chr21:44588754:M	TATGTATGTGTGTATATATATGTATGTGTGTGTGTAT	<9.8>	.	.	Motif=TATG	GT:AD:DP:PL	0/0:19,4:28:0,22,126	1/1:3,8:15:52,5,0	0/1:14,6:23:2,0,69
-chr21	44588788	chr21:44588788:M	TATATATATATAT	<7.5>	.	.	Motif=TA	GT:AD:DP:PL	0/0:33,0:33:0,95,255	0/1:9,6:16:56,0,89	0/0:24,0:24:0,69,255
-chr21	44594823	chr21:44594823:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,5:22:27,0,229	0/1:4,4:10:40,0,62	1/1:1,7:10:128,11,0
-chr21	44599135	chr21:44599135:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	<21>,<24>,<67.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,6,0,0:6:168,18,0,172,18,176,172,18,176,177	3/3:0,0,0,4:5:61,61,61,61,61,61,12,12,12,0	1/2:0,10,4,0:16:255,115,85,255,0,255,255,115,255,255
-chr21	44600560	chr21:44600560:M	ACTCACTCACTCATTCACTCACTCACCCACTCACTC	<8>	.	.	Motif=ACTC	GT:AD:DP:PL	0/1:12,12:24:159,0,160	0/0:23,0:23:0,68,255	0/1:13,17:30:230,0,155
-chr21	44606164	chr21:44606164:M	AAAAAAAAAAAAAAAAAAAA	<19>,<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,6,0:12:70,0,70,104,88,244	0/1:10,4,1:16:32,0,131,59,122,227	0/2:3,0,7:11:100,127,225,0,43,19
-chr21	44615550	chr21:44615550:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:13,10:23:107,0,159	1/1:0,20:24:255,48,0	0/0:22,4:27:0,11,255
-chr21	44635346	chr21:44635346:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	1/1:0,0:1:0,0,0	0/1:5,2:7:14,0,64
-chr21	44645359	chr21:44645359:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,13:24:177,0,113	1/1:1,19:22:255,37,0	0/1:10,9:20:113,0,119
-chr21	44650215	chr21:44650215:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,21:30:255,0,79	1/1:1,30:31:255,74,0	0/1:9,15:24:202,0,94
-chr21	44651980	chr21:44651980:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/0:3,0:3:0,9,53	0/0:3,0:3:0,9,51	0/1:1,3:7:46,0,12
-chr21	44661282	chr21:44661282:M	AAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:6,5:12:64,0,70	1/1:0,4:5:79,14,0	0/0:3,0:5:0,14,75
-chr21	44672570	chr21:44672570:M	AAAACAAAAAAAAAAGAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:31:193,0,211	1/1:0,34:34:255,100,0	0/1:16,22:38:255,0,184
-chr21	44674119	chr21:44674119:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,14:32:166,0,241	1/1:1,30:34:255,81,0	0/0:28,1:31:0,73,255
-chr21	44674732	chr21:44674732:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<21>,<23>,<25>,<26>	.	.	Motif=GT	GT:AD:DP:PL	2/4:0,0,5,1,2:8:176,178,199,42,66,51,147,149,17,140,140,136,0,119,131	3/4:1,0,0,7,4:12:217,239,255,232,255,255,38,77,77,43,97,115,114,0,80	1/2:0,7,10,0,0:17:255,255,243,193,0,156,255,255,193,255,255,255,193,255,255
-chr21	44674876	chr21:44674876:M	AAAAAAAAAAAGAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,3:35:0,47,255	0/0:34,3:38:0,58,255	0/1:17,25:42:255,0,188
-chr21	44675528	chr21:44675528:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,12:31:138,0,255	1/1:0,46:46:255,135,0	0/1:18,26:44:255,0,205
-chr21	44689713	chr21:44689713:M	ATATATATATATATATATATATATATAT	<15>,<67.5>	.	.	Motif=AT	GT:AD:DP:PL	2/2:0,0,3:5:41,41,41,8,8,0	.	1/1:0,3,0:3:48,9,0,57,9,88
-chr21	44693648	chr21:44693648:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,138,0	1/1:0,44:44:255,132,0	1/1:0,46:47:255,138,0
-chr21	44708008	chr21:44708008:M	CACACACACACACACACACACACACACACACACACACACCACACA	<17.5>,<19.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,14,0:16:255,45,0,255,42,255	1/1:0,16,0:17:255,51,0,255,51,255	1/2:0,9,11:22:255,255,249,243,0,204
-chr21	44710075	chr21:44710075:M	CCCCCACCCCCAC	<2.3>	.	.	Motif=CCCCCA	GT:AD:DP:PL	.	1/1:0,25:25:255,75,0	0/0:23,0:23:0,69,255
-chr21	44716736	chr21:44716736:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:2,0,5:7:127,133,186,0,53,38	0/2:2,0,4:7:100,108,170,0,62,50	0/1:3,10,0:15:255,0,47,255,80,255
-chr21	44721227	chr21:44721227:M	ACACACACACACACACACACACACACACACACACACACA	<18.5>,<20.5>	.	.	Motif=AC	GT:AD:DP:PL	2/2:0,0,21:23:255,255,255,64,58,0	0/2:13,0,6:20:52,107,255,0,179,158	1/2:0,13,16:31:255,255,255,216,0,255
-chr21	44721299	chr21:44721299:M	ATAGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAG	<10.8>,<12.8>,<13.8>	.	.	Motif=ATAG	GT:AD:DP:PL	2/2:0,0,19,0:19:255,255,255,56,57,0,255,255,56,255	2/3:0,0,12,11:23:255,255,255,199,200,134,185,217,0,151	1/2:1,11,11,0:23:255,189,255,189,0,255,255,208,255,255
-chr21	44721908	chr21:44721908:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,3:11:21,0,104	0/1:8,2:11:2,0,115	0/0:7,1:10:0,11,127
-chr21	44745301	chr21:44745301:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,30:32:255,57,0	0/1:29,19:49:193,0,255	0/1:22,19:41:226,0,255
-chr21	44752615	chr21:44752615:M	AGAGAGAAAGAGAGGGAGAGAGGGAGA	<12.5>	.	.	Motif=AG	GT:AD:DP:PL	1/1:0,33:33:255,98,0	0/1:13,12:25:143,0,161	0/1:13,10:23:119,0,175
-chr21	44757725	chr21:44757725:M	GGGGGGTGGGGGGGGGG	<18>	.	.	Motif=G	GT:AD:DP:PL	1/1:1,10:11:158,14,0	1/1:0,8:8:136,23,0	0/1:2,7:9:95,0,8
-chr21	44787093	chr21:44787093:M	AAAAAAAAAAAAGAAAGAAAGAAAAAGAAAA	<30>,<32>	.	.	Motif=A	GT:AD:DP:PL	0/2:9,0,10:23:73,124,255,0,90,60	0/2:14,1,10:27:60,117,255,0,123,109	1/2:0,20,10:39:255,123,144,239,0,255
-chr21	44794530	chr21:44794530:M	TTTTTTTGTTTTTTTTTTTTTTT	<22>,<24>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,6:14:174,100,144,92,0,134	0/1:3,8,2:14:111,0,35,113,10,221	1/1:0,20,0:21:255,62,0,255,63,255
-chr21	44800916	chr21:44800916:M	CAGAGACAGAGA	<1.7>	.	.	Motif=CAGAGA	GT:AD:DP:PL	0/1:22,19:41:255,0,255	0/1:26,26:52:255,0,255	1/1:0,42:42:255,126,0
-chr21	44826357	chr21:44826357:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,15:29:194,0,166	0/1:15,15:30:176,0,176	0/0:33,1:34:0,82,255
-chr21	44826837	chr21:44826837:M	AAAAAAAAAAAAAAAAAAGAAAAA	<17>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,24,6:30:255,107,89,255,0,255	1/2:1,13,7:24:255,102,151,255,0,255	1/1:0,36,0:40:255,119,0,255,119,255
-chr21	44828164	chr21:44828164:M	AAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,3:18:52,0,255	0/1:6,4:12:73,0,151	0/0:17,0:20:0,59,255
-chr21	44828783	chr21:44828783:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,13:20:200,0,34	0/1:6,5:12:61,0,69	0/0:17,0:17:0,50,255
-chr21	44830608	chr21:44830608:M	GGGGTGGGGGTGGGGGTGGGGGTGGGGG	<5.7>	.	.	Motif=GGGGTG	GT:AD:DP:PL	0/1:10,6:16:67,0,144	0/1:5,4:9:46,0,64	0/0:15,0:15:0,44,255
-chr21	44839696	chr21:44839696:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,5:10:59,0,59	0/1:6,7:14:89,0,61	1/1:0,12:15:239,43,0
-chr21	44842396	chr21:44842396:M	TTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,8:11:207,0,3	1/1:0,7:10:226,27,0	0/1:1,3:7:84,0,15
-chr21	44844250	chr21:44844250:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,30:31:255,73,0	1/1:2,31:33:255,61,0	1/1:0,40:40:255,118,0
-chr21	44848127	chr21:44848127:M	ACCTCCACCTCC	<1.8>	.	.	Motif=ACCTCC	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:21,19:40:255,0,255	1/1:0,41:41:255,123,0
-chr21	44852184	chr21:44852184:M	TTTTTTATTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,14:28:186,0,184	0/0:36,0:36:0,106,255	0/1:22,14:36:155,0,255
-chr21	44853508	chr21:44853508:M	AAAAAAAAAAAAAAAAAAAAA	<20>,<23>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,3,3:9:106,57,62,43,0,86	1/2:1,4,3:8:110,58,62,50,0,100	1/1:1,11,0:13:186,20,0,219,38,255
-chr21	44866210	chr21:44866210:M	ACACACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,19:19:255,55,0	1/1:0,23:28:255,75,0	1/1:0,15:15:247,44,0
-chr21	44866424	chr21:44866424:M	ACACACACACACACACACACACA	<10.5>	.	.	Motif=AC	GT:AD:DP:PL	1/1:0,4:4:80,12,0	1/1:0,1:2:19,3,0	1/1:0,2:2:39,6,0
-chr21	44870526	chr21:44870526:M	AAAAAAAAAAAAAAAAAAAAAAA	<14>,<25>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,17,1:20:255,45,0,255,21,255	1/1:0,12,0:14:255,42,0,255,42,255	2/2:0,0,4:4:108,110,113,12,12,0
-chr21	44877125	chr21:44877125:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,5:13:65,0,75	0/1:9,4:14:29,0,126	0/1:4,19:23:255,0,4
-chr21	44880719	chr21:44880719:M	AAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,15:35:255,0,255	0/1:22,12:37:222,0,255	1/1:0,15:15:255,45,0
-chr21	44882992	chr21:44882992:M	TTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:22,19:42:255,0,255	0/1:12,24:38:255,0,222	1/1:0,20:21:255,60,0
-chr21	44883773	chr21:44883773:M	TTTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,3:10:56,0,115	0/1:5,2:9:33,0,113	1/1:0,7:9:197,24,0
-chr21	44892605	chr21:44892605:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:2,1:4:9,0,26	0/1:1,1:3:11,0,10	1/1:0,5:5:85,15,0
-chr21	44892734	chr21:44892734:M	AAAAAAAAAAACAAAAAACAAAAAACAAAAA	<32>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:31:0,91,255	0/1:5,13:18:174,0,34	0/0:35,0:36:0,105,255
-chr21	44904606	chr21:44904606:M	ACACAAACACACCACATGCACGCACACACACTCGCACACACATACACACACCAAACACACACACATGCACTCACGCACATACACCACACACA	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:1,1:2:50,0,21	1/1:0,3:4:167,9,0	1/1:0,0:1:0,0,0
-chr21	44906128	chr21:44906128:M	CTTCCCTCCCTTCCCCTTCCCTCCCTTCCCTCCCTTCCCTCCCTCCCTTCCCTCCCCTTCTCTTCCCTTCC	<11.6>	.	.	Motif=CTTCC	GT:AD:DP:PL	0/1:4,8:12:184,0,72	1/1:0,21:21:255,63,0	0/0:3,0:4:0,10,83
-chr21	44914933	chr21:44914933:M	AAAAAAAAAAGAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:32,0:32:0,93,255	0/0:34,1:36:0,86,255	0/1:21,15:39:137,0,245
-chr21	44922659	chr21:44922659:M	AAAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,78,0	1/1:0,32:35:255,101,0	1/1:0,22:26:255,76,0
-chr21	44925138	chr21:44925138:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:29,2:34:0,59,255	0/1:19,13:33:132,0,244	0/0:38,3:42:0,69,255
-chr21	44925397	chr21:44925397:M	AAGGAAGAAGGAAGGGAGGGAGGGAGGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	<19.5>,<20.5>	.	.	Motif=AAGG	GT:AD:DP:PL	1/2:0,2,2:5:65,17,8,30,0,18	1/2:0,1,3:7:63,25,14,28,0,15	1/1:0,9,1:14:212,33,0,133,21,104
-chr21	44935942	chr21:44935942:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,32:33:255,97,0	0/1:7,12:19:160,0,68	1/1:1,25:27:255,61,0
-chr21	44938103	chr21:44938103:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	0/0:45,0:47:0,138,255	0/1:20,19:41:220,0,255	0/0:38,2:40:0,81,255
-chr21	44940673	chr21:44940673:M	TTTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,14,18:33:255,255,245,252,0,162	2/2:0,2,41:44:255,255,255,128,94,0	1/2:0,21,31:52:255,255,255,255,0,226
-chr21	44950101	chr21:44950101:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,8:21:88,0,171	0/0:16,1:19:0,38,255	0/1:16,18:34:228,0,192
-chr21	44955208	chr21:44955208:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:2,23:26:255,40,0	1/1:2,15:18:230,18,0	1/1:1,17:18:255,35,0
-chr21	44963376	chr21:44963376:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,9,11:23:255,195,255,147,0,197	2/2:2,0,15:19:248,255,255,21,50,0	1/2:4,11,14:30:255,192,255,132,0,236
-chr21	44968754	chr21:44968754:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:51,0,97	0/0:16,0:17:0,49,255	0/1:6,5:12:53,0,79
-chr21	44988460	chr21:44988460:M	TGTGTGTGCGTGTGTG	<9>	.	.	Motif=TG	GT:AD:DP:PL	0/1:15,9:24:96,0,209	0/0:29,0:29:0,85,255	0/1:17,16:33:196,0,213
-chr21	44988491	chr21:44988491:M	GTGTGCGTGTGCATGCGTGTGCGTGCGTGTGTGTGCGTGTGCGTGTGC	<8.3>	.	.	Motif=GTGTGC	GT:AD:DP:PL	0/0:14,4:18:0,12,71	0/0:23,0:23:0,52,165	0/1:5,7:12:23,0,9
-chr21	44992540	chr21:44992540:M	GTGTGTGTGTGTGTGTGAGAGTGTGTGTGTG	<18.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:13,11:24:235,0,255	0/0:28,0:28:0,84,255	0/1:11,20:32:255,0,216
-chr21	44994479	chr21:44994479:M	TGTGTGAGTGTGCGTGTGTGTGTGTTGTGTGTGTGTGTGTG	<21.5>,<25.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,9,6:15:255,160,133,169,0,220	1/1:0,18,0:19:255,56,0,255,57,255	1/2:0,13,7:20:255,185,147,237,0,255
-chr21	45013931	chr21:45013931:M	TTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:19:255,55,0	1/1:0,15:18:255,52,0	1/1:0,19:21:255,61,0
-chr21	45029237	chr21:45029237:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,11:17:158,0,41	0/1:10,14:28:180,0,110	0/1:13,9:22:95,0,165
-chr21	45052603	chr21:45052603:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:13,7:20:72,0,183	0/0:33,0:33:0,97,255	0/1:18,15:34:175,0,231
-chr21	45057536	chr21:45057536:M	TTTTTTCTTTTCTTTCTTTTTTTTTTTTT	<28>	.	.	Motif=T	GT:AD:DP:PL	0/1:20,9:30:88,0,255	0/0:27,0:27:0,79,255	0/1:15,3:18:2,0,219
-chr21	45059786	chr21:45059786:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	0/0:16,2:19:0,19,255	0/1:15,9:26:94,0,190	0/0:28,1:30:0,70,255
-chr21	45061429	chr21:45061429:M	TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTGTCT	<10.8>,<11.8>	.	.	Motif=TCTG	GT:AD:DP:PL	0/2:16,1,11:28:237,184,255,0,255,255	0/1:15,9,0:24:88,0,193,133,255,255	0/2:19,0,14:33:255,247,255,0,255,255
-chr21	45065528	chr21:45065528:M	CCCCCCCCCCC	<14>	.	.	Motif=C	GT:AD:DP:PL	0/0:15,0:16:0,48,255	0/0:16,0:17:0,51,255	0/1:5,6:11:129,0,114
-chr21	45092899	chr21:45092899:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,46:46:255,136,0	1/1:1,43:44:255,111,0	0/1:29,26:55:255,0,255
-chr21	45105080	chr21:45105080:M	TTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTT	<6.4>	.	.	Motif=TTGTT	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:0,28:28:255,82,0	1/1:0,29:29:255,86,0
-chr21	45106194	chr21:45106194:M	TTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,22,11:34:255,200,105,255,0,255	1/1:0,26,0:29:255,78,0,255,84,255	0/2:22,1,15:41:255,255,255,0,255,255
-chr21	45113524	chr21:45113524:M	TATATATATATATAT	<6.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:29,8:38:4,0,237	0/0:38,0:38:0,103,255	0/1:12,11:23:66,0,77
-chr21	45123275	chr21:45123275:M	GTGTGTGTGTGTGTGTGTGT	<11>	.	.	Motif=GT	GT:AD:DP:PL	1/1:1,31:32:255,76,0	1/1:0,41:41:255,120,0	0/1:18,23:41:255,0,203
-chr21	45124767	chr21:45124767:M	GTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<24>,<25>,<27>	.	.	Motif=GT	GT:AD:DP:PL	2/3:0,0,9,7:16:255,255,255,183,194,164,119,159,0,213	2/2:0,3,16,0:19:247,195,223,53,4,0,255,255,57,255	1/3:0,12,0,6:18:255,159,133,255,164,255,255,0,209,255
-chr21	45134690	chr21:45134690:M	TTTTTTTTTTTTTTTTTT	<19>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,15:19:225,2,0	0/1:5,22:28:255,0,4	0/1:13,7:24:54,0,199
-chr21	45138923	chr21:45138923:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9:26:86,0,201	0/0:17,2:21:0,25,255	0/1:9,12:22:143,0,100
-chr21	45166880	chr21:45166880:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,39:39:255,115,0	1/1:1,52:53:255,138,0	0/1:18,38:56:255,0,172
-chr21	45174683	chr21:45174683:M	ATACATACATACATACATACATACATACATACATACATACATACAT	<10.5>	.	.	Motif=ATAC	GT:AD:DP:PL	0/1:16,16:33:210,0,221	1/1:0,37:38:255,111,0	0/0:27,0:28:0,82,255
-chr21	45184449	chr21:45184449:M	TTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,13:17:242,29,0	1/1:2,21:29:255,49,0	0/1:12,12:25:142,0,152
-chr21	45188614	chr21:45188614:M	TTTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,21:35:255,0,235	1/1:0,25:27:255,75,0	0/0:52,0:54:0,161,255
-chr21	45189734	chr21:45189734:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:27,1:28:0,64,255	0/1:17,11:30:104,0,228	0/0:36,1:39:0,96,255
-chr21	45191850	chr21:45191850:M	ATATATATATATATATATATATATATATATAT	<9.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	1/2:0,4,3:9:101,12,64,94,0,88	2/2:0,0,3:5:15,28,97,6,14,0	1/2:0,2,0:3:50,3,9,48,0,47
-chr21	45191881	chr21:45191881:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,12:18:255,36,0	1/1:0,0:1:0,0,0	1/1:0,18:19:255,56,0
-chr21	45197500	chr21:45197500:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/1:16,5:22:21,0,219	0/1:11,9:20:99,0,135
-chr21	45205263	chr21:45205263:M	AAAGAAAGAAAGAAAGAAAGAAAGAAATGAAA	<7>	.	.	Motif=AAAG	GT:AD:DP:PL	0/0:31,0:32:0,83,255	0/0:22,0:22:0,64,255	0/1:10,15:30:204,0,86
-chr21	45219990	chr21:45219990:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:8,0,7:15:83,107,255,0,143,101	1/2:1,3,12:16:227,155,170,34,0,5	0/1:11,7,1:21:168,0,250,125,175,255
-chr21	45225071	chr21:45225071:M	TTGTTTTGTTTTGTTTTGTTTTGTT	<4>	.	.	Motif=TTGTT	GT:AD:DP:PL	0/1:34,24:58:255,0,255	1/1:0,52:53:255,154,0	0/0:45,0:45:0,133,255
-chr21	45243231	chr21:45243231:M	AAAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAACAAAAGAAAAAAAGAAAAA	<59>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,0:5:5,0,70	0/1:1,3:4:74,0,16	0/0:6,0:6:0,18,166
-chr21	45249978	chr21:45249978:M	AAAAAAAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,28:42:255,0,224	0/1:16,16:34:255,0,255	0/0:22,0:29:0,85,255
-chr21	45275885	chr21:45275885:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:25,14:39:146,0,255	0/1:16,9:26:93,0,207	0/0:32,0:32:0,94,255
-chr21	45287191	chr21:45287191:M	GCCCCGGCCCCTGCCCCTGCCCCTGCCCCTG	<6.2>	.	.	Motif=GCCCCT	GT:AD:DP:PL	0/1:4,4:8:51,0,51	0/0:7,1:8:0,6,105	0/0:5,0:5:0,15,91
-chr21	45290565	chr21:45290565:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,16:29:205,0,141	0/1:19,16:38:185,0,226	0/0:41,0:41:0,120,255
-chr21	45308087	chr21:45308087:M	ACACACATACACAGACACAC	<8>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,11:37:255,0,255	1/1:0,25:25:255,75,0	0/1:20,15:35:255,0,255
-chr21	45311773	chr21:45311773:M	ACACACACACACACACACACACACACACACACACA	<16.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/0:22,1:26:0,48,255	0/1:8,22:32:255,0,51
-chr21	45311875	chr21:45311875:M	CCATCCATCCATCCATCCATCCATCCATCCATTCATCCATCCATCCATCCATCCA	<14.8>	.	.	Motif=CCAT	GT:AD:DP:PL	0/1:9,11:20:147,0,109	1/1:0,14:14:248,41,0	0/1:3,9:13:127,0,25
-chr21	45346258	chr21:45346258:M	TTTTTTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:21,0:23:0,66,255	0/1:12,28:42:255,0,234	0/0:13,0:17:0,47,255
-chr21	45350807	chr21:45350807:M	CACACACACACACACACACAC	<8.5>,<9.5>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,42,0:42:255,126,0,255,124,255	1/2:0,22,22:45:255,255,255,255,0,255	1/1:0,48,0:48:255,144,0,255,142,255
-chr21	45398792	chr21:45398792:M	AAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:38,0:41:0,122,255	0/0:33,0:36:0,105,255	0/1:17,8:28:140,0,255
-chr21	45401127	chr21:45401127:M	AAAAAAAAAAAAAAAAA	<16>,<18>	.	.	Motif=A	GT:AD:DP:PL	2/2:1,0,6:7:92,111,170,2,18,0	0/2:7,0,6:13:66,102,247,0,102,84	0/1:6,10,4:21:131,0,88,115,21,255
-chr21	45401382	chr21:45401382:M	TTTGTTTGTTT	<1.8>	.	.	Motif=TTTG	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:39,0:39:0,115,255	0/1:29,24:53:255,0,255
-chr21	45412238	chr21:45412238:M	TTTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,18:21:255,62,0	1/1:0,11:15:255,37,0	1/1:0,22:27:255,75,0
-chr21	45428891	chr21:45428891:M	TTTCTTTCTTTTCTTTTTTTTTTTT	<4.8>,<5.2>	.	.	Motif=TTTCT	GT:AD:DP:PL	0/1:16,9,0:25:87,0,214,156,241,255	0/1:18,18,0:36:216,0,217,255,255,255	0/2:15,2,8:26:74,106,255,0,190,213
-chr21	45432237	chr21:45432237:M	GCTGGGGCTGGGGCTGGGCTGG	<2.7>	.	.	Motif=GCTGGG	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/0:27,0:27:0,80,255	0/1:15,16:31:210,0,191
-chr21	45437211	chr21:45437211:M	CACACACACACACAGACACACA	<10>	.	.	Motif=CA	GT:AD:DP:PL	0/0:6,2:8:0,1,40	0/0:12,0:12:0,31,117	1/1:0,3:4:28,7,0
-chr21	45437246	chr21:45437246:M	ACACACACACACTCACACACTCAGACACACA	<14.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,3:9:31,0,89	0/0:17,1:18:0,35,255	1/1:0,4:6:91,17,0
-chr21	45437359	chr21:45437359:M	CACACACACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	1/1:0,1:1:19,3,0	1/1:0,7:7:126,21,0	1/1:0,2:2:37,6,0
-chr21	45437435	chr21:45437435:M	CACACACACACTCACTCACAGACAGACACACA	<11>	.	.	Motif=CA	GT:AD:DP:PL	0/1:29,10:40:126,0,255	0/1:25,5:31:37,0,255	0/1:13,8:23:140,0,255
-chr21	45437625	chr21:45437625:M	CACACACACTCACACA	<6>,<10>,<11>,<12>,<16>	.	.	Motif=CA	GT:AD:DP:PL	3/5:0,1,1,3,2,4:11:159,159,182,96,84,94,70,57,76,77,78,68,76,75,90,74,87,18,0,16,118	1/3:0,3,1,2,2,0:8:103,81,96,58,19,81,38,0,69,74,43,6,68,73,85,120,104,100,91,100,198	2/4:0,0,4,1,4,0:9:150,167,219,56,57,30,47,51,17,24,45,57,0,17,30,164,219,57,51,57,220
-chr21	45437689	chr21:45437689:M	CACACACACACACACACTCAGACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	0/1:2,3:8:66,0,17	0/1:1,3:5:50,0,5	1/1:0,7:12:181,31,0
-chr21	45437925	chr21:45437925:M	CACACACACACACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:10,0:12:0,15,77	0/0:10,0:12:0,30,107	1/1:0,4:4:36,10,0
-chr21	45437965	chr21:45437965:M	CACACACACACTCACACACTCAGACACACA	<13>	.	.	Motif=CA	GT:AD:DP:PL	0/0:14,0:18:0,2,165	0/0:10,0:14:0,18,137	1/1:1,5:6:61,2,0
-chr21	45438007	chr21:45438007:M	CACACACACACTCACTCACACACAGACACACA	<14>,<17>	.	.	Motif=CA	GT:AD:DP:PL	1/2:0,2,3:5:32,19,47,22,0,25	1/2:0,3,2:6:36,10,24,35,0,50	0/0:3,0,1:5:0,1,40,3,12,17
-chr21	45438249	chr21:45438249:M	CACACACACACACTCACACTCAGACACACA	<14>,<16>	.	.	Motif=CA	GT:AD:DP:PL	0/1:6,2,0:9:1,0,26,21,34,65	0/0:15,3,1:20:0,21,100,36,96,130	1/2:0,3,3:8:38,19,23,32,0,47
-chr21	45438327	chr21:45438327:M	CACACACACACACTCACACACTCAGACACACA	<18>	.	.	Motif=CA	GT:AD:DP:PL	0/1:2,4:7:51,0,17	0/1:4,3:11:31,0,48	0/1:5,6:15:66,0,78
-chr21	45438371	chr21:45438371:M	CACACACACACACTCACACAC	<6.5>	.	.	Motif=CA	GT:AD:DP:PL	0/0:35,0:36:0,108,255	0/0:25,0:25:0,75,255	0/1:17,15:32:255,0,255
-chr21	45442905	chr21:45442905:M	GGTGGTGGTGCTGGTGTGGGCGGTGGTGGTGCTGGTG	<6.3>,<11.3>	.	.	Motif=GGT	GT:AD:DP:PL	0/1:8,8,3:20:134,0,255,133,56,191	0/1:9,4,2:15:55,0,243,63,72,128	1/2:2,11,8:21:255,64,246,214,0,209
-chr21	45452843	chr21:45452843:M	ATGTATGTATGT	<2.5>	.	.	Motif=ATGT	GT:AD:DP:PL	0/1:17,14:31:255,0,255	0/1:22,13:35:255,0,255	1/1:0,28:28:255,84,0
-chr21	45470482	chr21:45470482:M	TTTTTTTTTTGTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:21,12:33:116,0,255	0/1:9,8:18:97,0,100	0/0:18,0:19:0,55,255
-chr21	45479340	chr21:45479340:M	ACACACACTACACACAC	<6.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:18,11:29:255,0,255	0/1:13,14:27:255,0,255	0/0:44,0:44:0,132,255
-chr21	45479602	chr21:45479602:M	CACACACACACACACA	<7>	.	.	Motif=CA	GT:AD:DP:PL	0/1:11,15:26:218,0,135	0/1:17,17:34:213,0,208	0/1:18,15:33:191,0,241
-chr21	45484083	chr21:45484083:M	ACACACACACAC	<7>	.	.	Motif=AC	GT:AD:DP:PL	0/0:26,0:26:0,77,255	0/0:12,2:14:0,5,182	0/1:15,5:20:35,0,223
-chr21	45484399	chr21:45484399:M	ACACACACACACAC	<6>	.	.	Motif=AC	GT:AD:DP:PL	0/1:27,5:32:4,0,255	0/0:21,0:21:0,62,255	0/1:18,12:30:141,0,250
-chr21	45495709	chr21:45495709:M	CACACATACACGCACACACACA	<12>	.	.	Motif=CA	GT:AD:DP:PL	0/1:23,19:42:208,0,255	0/1:25,18:44:175,0,255	1/1:0,44:46:255,129,0
-chr21	45511050	chr21:45511050:M	ACACCCACACCCATCCACACCCCCACACACCACACACACA	<7>	.	.	Motif=ACACCC	GT:AD:DP:PL	0/1:5,6:11:83,0,65	1/1:0,8:8:154,24,0	0/0:10,0:10:0,30,196
-chr21	45515164	chr21:45515164:M	AAAAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,19:29:255,0,84	1/1:4,34:40:255,34,0	0/0:32,1:34:0,72,255
-chr21	45519571	chr21:45519571:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,5:7:71,0,0	1/1:0,9:9:151,26,0	0/1:1,1:3:9,0,20
-chr21	45521021	chr21:45521021:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,14:24:195,0,85	1/1:2,37:39:255,80,0	0/0:35,2:37:0,73,255
-chr21	45527941	chr21:45527941:M	AAAAAAAAAAAAAAAAAA	<17>,<19>	.	.	Motif=A	GT:AD:DP:PL	1/2:2,14,12:28:255,183,255,219,0,255	0/2:13,1,9:23:88,136,255,0,171,169	1/1:0,20,0:22:255,64,0,255,65,255
-chr21	45537725	chr21:45537725:M	CCCACCCACCCAC	<2.2>	.	.	Motif=CCCA	GT:AD:DP:PL	0/1:12,4:16:20,0,153	0/1:6,2:8:9,0,72	0/1:10,7:17:65,0,114
-chr21	45541025	chr21:45541025:M	AAGAAGAAGAAGAA	<6.7>	.	.	Motif=AAG	GT:AD:DP:PL	1/1:0,43:43:255,129,0	0/1:24,16:40:255,0,255	1/1:0,35:35:255,105,0
-chr21	45558796	chr21:45558796:M	TTTTCTTTTTCTTTTTTCTTTTTTTTTTTTTT	<31>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:23:0,68,255	0/1:10,12:23:153,0,108	0/0:12,1:13:0,20,199
-chr21	45566179	chr21:45566179:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:10,1:13:0,18,168	0/1:8,3:12:25,0,98	0/0:15,2:19:0,21,242
-chr21	45591594	chr21:45591594:M	ACACACCATCACACCACACACACAAAACACATCACATAGAGACACACACCACACACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:24,13:37:231,0,255	0/1:11,4:23:87,0,255	0/1:17,4:21:42,0,255
-chr21	45597422	chr21:45597422:M	TTTATTTATTTATTTATTTATTTATTTATT	<6.5>	.	.	Motif=TTTA	GT:AD:DP:PL	0/1:18,11:29:127,0,255	0/0:31,0:31:0,91,255	0/1:16,18:34:238,0,201
-chr21	45616060	chr21:45616060:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,15:16:255,47,0	0/1:4,19:23:255,0,1	1/1:2,21:23:255,32,0
-chr21	45624081	chr21:45624081:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,5:6:69,0,0	0/1:3,5:8:59,0,26	0/1:8,9:17:103,0,86
-chr21	45627812	chr21:45627812:M	AAAAAAAAAAAAAAGAAAGAAAGAAAAAA	<30>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,7:17:78,0,115	0/1:8,4:14:28,0,113	1/1:2,14:16:209,12,0
-chr21	45641986	chr21:45641986:M	TTTTTTTTTTTTTTTTT	<14>,<15>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,4,5:10:233,88,60,79,0,53	1/2:0,6,7:13:255,118,81,101,0,64	0/1:6,8,1:16:188,0,137,117,135,244
-chr21	45644506	chr21:45644506:M	TTTTTTTCTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,36:38:255,74,0	1/1:0,46:47:255,138,0	0/1:15,27:42:255,0,157
-chr21	45645239	chr21:45645239:M	TTTTTTTTTTTT	<11>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,41:42:255,124,0	1/1:0,39:39:255,115,0	1/1:0,38:39:255,115,0
-chr21	45646054	chr21:45646054:M	TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCT	<26.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,3:6:64,16,0	1/1:0,3:6:44,11,0	1/1:0,5:6:56,13,0
-chr21	45646108	chr21:45646108:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<17.5>,<22.5>,<24.5>	.	.	Motif=TG	GT:AD:DP:PL	1/3:0,8,0,8:20:255,235,206,255,167,255,197,0,232,208	1/3:0,4,0,6:14:255,200,188,206,124,203,82,0,93,75	2/3:0,0,5,8:17:255,255,255,176,176,131,122,128,0,83
-chr21	45647063	chr21:45647063:M	AAAAAAAAAACAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,48:48:255,142,0	1/1:0,42:42:255,124,0	0/1:18,20:38:255,0,223
-chr21	45652443	chr21:45652443:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:8,7:16:82,0,101	0/1:9,6:15:60,0,111	0/0:20,1:23:0,49,255
-chr21	45654339	chr21:45654339:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:4,0:5:0,14,81	0/1:4,1:5:2,0,53	0/1:1,4:6:63,0,0
-chr21	45659338	chr21:45659338:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,5:13:60,0,85	0/0:8,1:11:0,14,130	0/0:11,0:11:0,32,189
-chr21	45662272	chr21:45662272:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,16,3:19:255,78,30,255,0,255	1/2:0,10,6:19:255,173,140,255,0,243	1/1:0,9,0:10:255,30,0,255,30,255
-chr21	45663159	chr21:45663159:M	TCTCCTCTCTCTCTCTCTCTCTCTC	<11.5>	.	.	Motif=TC	GT:AD:DP:PL	1/1:0,36:38:255,111,0	1/1:0,38:39:255,114,0	1/1:0,37:37:255,109,0
-chr21	45664005	chr21:45664005:M	TTTTTCTTTTTTTTTCTTTTTTTTTTTTT	<30>	.	.	Motif=T	GT:AD:DP:PL	1/1:2,21:23:255,31,0	1/1:0,18:18:255,53,0	1/1:1,23:25:255,56,0
-chr21	45664213	chr21:45664213:M	AATAATAATAATATAAGAATAATAATAATA	<4.3>	.	.	Motif=AAT	GT:AD:DP:PL	1/1:0,9:9:249,27,0	1/1:0,9:9:249,27,0	0/1:17,8:25:146,0,255
-chr21	45664591	chr21:45664591:M	TTTTATTTTTTTTAATTTTTTTTTTCTTTTCTTTTTTT	<33>	.	.	Motif=T	GT:AD:DP:PL	0/1:9,17:26:255,0,169	0/1:12,12:24:255,0,255	0/0:28,0:28:0,84,255
-chr21	45667076	chr21:45667076:M	TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTCTTTC	<9.2>,<10.2>,<17.2>	.	.	Motif=TTCT	GT:AD:DP:PL	1/3:0,11,0,8:19:255,221,188,255,220,255,255,0,211,255	1/3:0,10,0,6:16:255,165,135,255,164,255,255,0,180,255	1/2:0,11,8,0:19:255,129,96,206,0,153,255,150,207,255
-chr21	45669788	chr21:45669788:M	TGTGTGTGTGTGTGTGTGT	<8.5>,<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:5,3,4:15:52,43,113,0,16,175	0/1:2,3,0:5:21,0,10,36,24,141	0/1:5,1,0:8:12,0,37,36,59,181
-chr21	45669806	chr21:45669806:M	TATATATATATATATATATATATATATATATATATATATAT	<16.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,8:10:222,13,0	1/1:0,0:2:27,5,0	0/0:1,0:4:0,8,48
-chr21	45676368	chr21:45676368:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/1:25,11:37:101,0,255	0/1:20,22:42:255,0,236	0/1:25,28:53:255,0,255
-chr21	45678306	chr21:45678306:M	AAAAAAAAAAAAAAA	<12>,<14>	.	.	Motif=A	GT:AD:DP:PL	0/2:11,3,10:26:115,76,255,0,88,100	0/2:15,3,15:33:141,147,255,0,149,133	0/1:25,9,0:35:159,0,255,221,255,255
-chr21	45678319	chr21:45678319:M	AATAATAATAATAAAATAA	<8.3>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:12,10:27:168,0,251	0/1:19,10:33:147,0,255	1/1:0,27:36:255,33,0
-chr21	45679079	chr21:45679079:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,2:8:33,0,48	0/1:5,4:10:42,0,58	1/1:0,4:5:71,12,0
-chr21	45684056	chr21:45684056:M	AAAAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,2:7:14,0,68	0/1:1,4:5:52,0,2	0/1:5,2:8:11,0,72
-chr21	45685916	chr21:45685916:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:3,3:7:32,0,42	0/1:2,2:5:29,0,19	0/0:6,0:6:0,18,103
-chr21	45691385	chr21:45691385:M	TATATATATATATATCTCATATATATATTATATATATATAAAATATATATATCATATATAT	<32.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:10,5:18:57,0,167	1/1:0,1:1:20,3,0	0/1:3,2:5:27,0,47
-chr21	45691457	chr21:45691457:M	TGTGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:32,1:34:0,78,255	0/0:17,0:21:0,46,193	0/1:11,12:23:75,0,63
-chr21	45696793	chr21:45696793:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,27:42:255,0,158	0/1:27,18:48:190,0,255	0/0:33,1:34:0,82,255
-chr21	45697755	chr21:45697755:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,3:12:19,0,128	0/0:13,1:16:0,18,206	0/1:19,4:24:1,0,255
-chr21	45714436	chr21:45714436:M	ACACACACACACACACA	<9.5>	.	.	Motif=AC	GT:AD:DP:PL	0/0:31,0:31:0,92,255	0/1:26,17:43:182,0,255	0/0:44,0:44:0,130,255
-chr21	45721413	chr21:45721413:M	AAAAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,6:10:76,0,41	0/1:5,4:10:49,0,55	1/1:0,8:10:159,29,0
-chr21	45731869	chr21:45731869:M	CTTTTTTTTTTCTTTTGCTTT	<3.7>	.	.	Motif=CTTTTT	GT:AD:DP:PL	0/1:15,16:31:255,0,252	0/1:21,24:46:255,0,255	0/0:46,1:47:0,117,255
-chr21	45732505	chr21:45732505:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:34:0,80,255	0/0:38,2:41:0,84,255	0/1:22,21:43:255,0,255
-chr21	45740584	chr21:45740584:M	GTGTGTGTGTGCATGTGAGTGTGTGTGTGGTGTGTGTAGTGTGTGTGTGTGTGTGAAGTGTGTGTG	<34>,<36>	.	.	Motif=GT	GT:AD:DP:PL	0/2:11,0,4:15:73,101,245,0,176,255	0/2:4,0,2:6:41,50,99,0,62,95	0/1:5,9,0:16:104,0,39,143,80,255
-chr21	45744119	chr21:45744119:M	TATATATATATATACATATGTATGTATATAACATATATAT	<21>	.	.	Motif=TA	GT:AD:DP:PL	0/1:24,16:40:189,0,255	0/1:14,12:26:140,0,175	0/0:43,1:44:0,111,255
-chr21	45750396	chr21:45750396:M	CCCCCCCCCCCCCCCC	<12>	.	.	Motif=C	GT:AD:DP:PL	.	.	1/1:0,4:5:125,15,0
-chr21	45750897	chr21:45750897:M	TATATATATATAT	<8.5>	.	.	Motif=TA	GT:AD:DP:PL	0/1:25,23:52:255,0,255	0/1:22,22:45:255,0,255	0/0:48,0:48:0,144,255
-chr21	45752969	chr21:45752969:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:3,2:6:17,0,45	0/1:2,0:3:2,0,24	0/1:2,3:7:51,0,14
-chr21	45757891	chr21:45757891:M	TTTTTTTTTTTTTT	<13>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,14:30:184,0,191	0/1:14,16:32:197,0,163	1/1:1,27:30:255,70,0
-chr21	45776463	chr21:45776463:M	TCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTGTCTGTCTCCCTCT	<10.8>	.	.	Motif=TCTC	GT:AD:DP:PL	0/1:11,11:25:75,0,74	0/1:7,9:17:66,0,42	0/0:18,0:18:0,50,220
-chr21	45786127	chr21:45786127:M	AATAAAAAAATAAATAAATAAATAAATAAAT	<8>,<8.8>	.	.	Motif=AATA	GT:AD:DP:PL	0/2:13,2,9:24:107,130,255,0,191,196	0/1:10,4,2:16:43,0,204,50,134,213	0/1:25,4,0:29:4,0,255,86,255,255
-chr21	45786290	chr21:45786290:M	TTTTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,25:26:255,76,0	1/1:1,27:30:255,70,0	0/1:27,11:38:91,0,255
-chr21	45789425	chr21:45789425:M	TGTGTATGTGTA	<1.7>	.	.	Motif=TGTGTA	GT:AD:DP:PL	0/1:21,18:39:255,0,255	0/1:17,18:35:255,0,255	0/0:37,0:37:0,111,255
-chr21	45795310	chr21:45795310:M	TTTTTCTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:36:0,105,255	0/0:27,1:30:0,70,255	0/1:25,10:38:69,0,255
-chr21	45810219	chr21:45810219:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGTGTGTGTG	<22>,<26>	.	.	Motif=TG	GT:AD:DP:PL	0/2:16,0,4:21:56,106,255,0,255,255	0/2:17,0,8:27:182,232,255,0,255,255	0/1:8,10,0:19:123,0,99,178,151,255
-chr21	45810430	chr21:45810430:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:19,18:38:234,0,243	0/1:26,19:45:203,0,255	0/0:24,2:29:0,48,255
-chr21	45816743	chr21:45816743:M	TTTTTTTTTTTT	<11>,<13>	.	.	Motif=T	GT:AD:DP:PL	0/2:16,1,10:27:110,167,255,0,239,236	0/2:11,0,17:28:222,255,255,0,166,114	0/1:18,15,1:34:178,0,243,255,255,255
-chr21	45823723	chr21:45823723:M	TTTTTTTTTTATTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,75,0	1/1:0,40:45:255,114,0	1/1:2,35:42:255,77,0
-chr21	45826259	chr21:45826259:M	AAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:31:0,90,255	0/1:10,15:27:183,0,106	0/0:25,0:26:0,76,255
-chr21	45831409	chr21:45831409:M	AAAAAAAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,12:14:255,41,0	0/1:5,14:20:255,0,82	0/1:1,13:16:255,0,1
-chr21	45831704	chr21:45831704:M	AGTTAGTTAGTTAGTT	<5>	.	.	Motif=AGTT	GT:AD:DP:PL	0/1:30,17:47:190,0,255	0/1:17,18:35:224,0,206	0/1:22,13:35:141,0,255
-chr21	45840457	chr21:45840457:M	AAAAAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	0/1:9,2:13:1,0,134	0/1:6,7:17:90,0,63	0/1:9,3:12:16,0,120
-chr21	45842389	chr21:45842389:M	TTTGTTTGTTTGTTTGTTTGTT	<4.5>	.	.	Motif=TTTG	GT:AD:DP:PL	0/1:21,15:36:183,0,255	0/1:20,29:49:255,0,219	0/0:40,0:40:0,118,255
-chr21	45851607	chr21:45851607:M	ATAGATGGATGGATAGATAGATAGATAGATAGATAG	<8>	.	.	Motif=ATAG	GT:AD:DP:PL	0/1:17,15:32:189,0,224	0/1:18,13:31:139,0,227	0/1:26,16:43:182,0,255
-chr21	45868412	chr21:45868412:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,1:6:0,0,71	1/1:0,4:8:68,12,0	0/1:6,1:10:6,0,80
-chr21	45877796	chr21:45877796:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,22:41:255,0,238	0/1:16,18:35:228,0,183	0/1:22,23:45:255,0,255
-chr21	45919815	chr21:45919815:M	GTGTGTGTGTGTGTGTGTGTGTG	<7.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:7,12:32:249,0,176	0/1:18,12:35:227,0,255	0/1:6,13:29:255,0,137
-chr21	45975615	chr21:45975615:M	GTGTGGGTGTGGGTG	<1.5>	.	.	Motif=GTGTGG	GT:AD:DP:PL	0/1:12,20:32:255,0,137	0/0:36,0:37:0,108,255	0/1:12,28:41:255,0,111
-chr21	45977004	chr21:45977004:M	TGGGGGTGGGGGTGGGGGTGGGGGTGG	<3.5>	.	.	Motif=TGGGGG	GT:AD:DP:PL	0/1:3,7:10:105,0,28	1/1:0,10:10:181,29,0	0/1:9,8:17:100,0,119
-chr21	45980161	chr21:45980161:M	ATAATAATAATAATAATAA	<5.3>	.	.	Motif=ATA	GT:AD:DP:PL	0/1:14,16:30:216,0,179	1/1:0,34:34:255,100,0	0/1:13,14:27:180,0,162
-chr21	45980178	chr21:45980178:M	AAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAAGGAGAAG	<22.5>	.	.	Motif=AAGGAG	GT:AD:DP:PL	0/1:20,7:27:10,0,255	0/0:25,0:25:0,75,255	0/0:19,1:20:0,47,255
-chr21	46016495	chr21:46016495:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,33:33:255,97,0	0/1:19,15:35:165,0,246	1/1:1,49:50:255,129,0
-chr21	46018181	chr21:46018181:M	AAAAAAAAAAAA	<14>,<15>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,18,15:34:255,255,193,255,0,240	0/2:17,0,18:36:255,255,255,0,255,255	1/2:0,19,17:36:255,255,206,255,0,244
-chr21	46019068	chr21:46019068:M	TTTTTTTTTTTT	<13>,<15>,<16>	.	.	Motif=T	GT:AD:DP:PL	2/3:0,0,8,7:17:255,255,255,129,124,81,162,147,0,119	1/2:1,17,6,0:26:255,140,100,255,0,255,255,98,255,255	2/2:1,0,21,3:26:255,255,255,44,62,0,255,255,9,255
-chr21	46031087	chr21:46031087:M	TTTTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:16,15:31:182,0,201	1/1:3,20:23:255,15,0	0/1:12,13:25:159,0,140
-chr21	46032166	chr21:46032166:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:14,9:24:96,0,195	1/1:1,22:24:255,53,0	0/1:18,7:25:52,0,249
-chr21	46043985	chr21:46043985:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:19,0:19:0,56,255	0/1:6,4:10:39,0,74	0/0:15,0:16:0,47,255
-chr21	46044147	chr21:46044147:M	AAAAAAAAAAAAAAA	<16>,<17>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,11,10:22:255,171,120,161,0,139	1/2:2,7,8:18:255,111,97,67,0,91	1/2:1,6,8:15:255,123,99,72,0,74
-chr21	46053697	chr21:46053697:M	ACACACACACACACACACACAC	<13>	.	.	Motif=AC	GT:AD:DP:PL	0/1:26,13:40:242,0,255	0/1:24,22:48:255,0,255	0/0:32,0:34:0,101,255
-chr21	46068541	chr21:46068541:M	TGTGTGTGTGTGTGTGCATGTGTGTG	<12>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,15:16:255,47,0	1/1:0,14:16:255,44,0	1/1:0,14:14:253,41,0
-chr21	46068644	chr21:46068644:M	GTGTGTGTGTGCGTGTGTGTGCGTGTG	<8.5>	.	.	Motif=GT	GT:AD:DP:PL	0/0:3,0:3:0,9,136	0/0:4,0:4:0,12,175	0/1:1,7:9:187,0,29
-chr21	46068728	chr21:46068728:M	GTGTGTGTGTG	<4.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:15,5:20:28,0,198	0/0:9,0:9:0,26,149	0/1:7,8:15:92,0,73
-chr21	46068804	chr21:46068804:M	GTGTGTGTGTGTG	<5.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:22,8:30:68,0,255	0/0:33,0:33:0,97,255	1/1:0,17:17:255,50,0
-chr21	46068849	chr21:46068849:M	TGTGCATGTGTGTGCAAGTCCATGTGTGTGCATGTGCATGTG	<4.3>	.	.	Motif=TGTGCA	GT:AD:DP:PL	0/0:13,0:15:0,20,255	0/0:19,0:19:0,57,255	0/1:0,3:4:87,0,9
-chr21	46068913	chr21:46068913:M	TGTGTGTGTGTGCATGTGTGCCTGGGTGTGTGTGGGTGTGTG	<10>	.	.	Motif=TG	GT:AD:DP:PL	0/1:3,9:16:255,0,50	1/1:0,20:21:255,58,0	0/0:5,0:5:0,15,137
-chr21	46069242	chr21:46069242:M	GTGTGTGTGTGCGTGTGTGTGTGCGCATGTGTGTCTGGGTGTGTGCGCGTGTGTGCGTGTGCGTGTGTG	<27.5>	.	.	Motif=GT	GT:AD:DP:PL	0/1:5,3:8:47,0,94	0/0:6,0:6:0,18,145	1/1:0,11:11:255,33,0
-chr21	46070708	chr21:46070708:M	AAAAAAAAAAAAAGAAAAGAAAAAGAAAAAAA	<33>,<34>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,10,6:17:255,91,61,138,0,142	2/2:0,0,11:11:255,220,192,33,32,0	1/1:3,18,0:21:255,8,0,255,61,255
-chr21	46090107	chr21:46090107:M	TGTTGTTGTTGTTG	<3.7>	.	.	Motif=TGT	GT:AD:DP:PL	0/1:1,6:7:147,0,3	1/1:0,4:4:112,12,0	0/0:17,0:17:0,51,255
-chr21	46090714	chr21:46090714:M	TGGTGATGGTGATGATGATGGCAATGGTGATAATGGTGATGGGGTGATGGTGTGGTGGTGGTGATGGTGGTGGTGATGGTGGTGGTG	<22.5>	.	.	Motif=TGGTGA	GT:AD:DP:PL	1/1:0,3:5:32,4,0	1/1:0,4:8:47,9,0	1/1:0,4:5:51,11,0
-chr21	46090809	chr21:46090809:M	AGTAGTAGTAGT	<45>	.	.	Motif=AGT	GT:AD:DP:PL	0/1:2,3:5:23,0,42	0/1:1,3:4:26,0,17	0/1:1,3:4:26,0,18
-chr21	46090843	chr21:46090843:M	TGATGGTGATGATGATG	<45>	.	.	Motif=TGA	GT:AD:DP:PL	0/1:7,3:10:8,0,164	0/0:10,3:13:0,1,239	0/1:9,3:12:2,0,212
-chr21	46097062	chr21:46097062:M	CAGACACAGACACACACCACACACAGATACACACACCACAGACTCAAACTCAGTCTCAGACACAGACACA	<2.3>	.	.	Motif=CAGACA	GT:AD:DP:PL	0/1:11,34:45:255,0,147	0/1:7,26:33:255,0,80	0/1:11,17:28:255,0,198
-chr21	46097121	chr21:46097121:M	ACACAGACACACACCACACACTCAGATGCACACACCACACACACTCAGTCTCAGACACACACACACACCACA	<9>	.	.	Motif=AC	GT:AD:DP:PL	0/1:6,8:14:255,0,115	0/1:11,8:19:250,0,230	0/1:6,5:11:192,0,124
-chr21	46099890	chr21:46099890:M	TTTTTTTTTTTTTTTTTTTTTTT	<22>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:4:23,0,23	0/1:1,3:7:36,0,13	0/0:4,0:4:0,12,67
-chr21	46101848	chr21:46101848:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	.	.	1/1:0,9:10:255,30,0
-chr21	46102707	chr21:46102707:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,48:52:255,134,0	1/1:2,42:46:255,99,0	1/1:0,30:42:255,10,0
-chr21	46116917	chr21:46116917:M	ACACACGCATACACACACACACACACACACACACACACAC	<22>,<25>	.	.	Motif=AC	GT:AD:DP:PL	0/2:8,0,4:13:90,113,255,0,207,195	2/2:0,0,7:8:212,212,212,24,24,0	0/1:10,9,0:20:198,0,227,234,255,255
-chr21	46123600	chr21:46123600:M	GATGGATGAATGGATGGATTGCTGGATGAGTGGGTGGGTGGATGGAT	<12.8>	.	.	Motif=GATG	GT:AD:DP:PL	0/1:12,3:15:14,0,184	1/1:0,21:21:255,62,0	0/0:31,0:31:0,91,255
-chr21	46123892	chr21:46123892:M	TGGATAGATGGATGGGTGGGTGGATAGAGGATGGATGG	<4.8>	.	.	Motif=TGGA	GT:AD:DP:PL	0/0:21,0:21:0,63,255	0/0:28,0:28:0,84,255	0/1:3,7:12:167,0,97
-chr21	46123969	chr21:46123969:M	GTGAGTGAGTG	<1.8>	.	.	Motif=GTGA	GT:AD:DP:PL	0/1:17,15:32:195,0,235	1/1:0,36:36:255,106,0	0/0:26,0:26:0,77,255
-chr21	46141304	chr21:46141304:M	TTTTTTTTTTTTCTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,12:24:156,0,153	1/1:1,21:23:255,50,0	0/0:34,1:35:0,85,255
-chr21	46141717	chr21:46141717:M	AAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,16:32:207,0,206	1/1:1,37:40:255,99,0	0/0:40,0:42:0,123,255
-chr21	46147290	chr21:46147290:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,30:31:255,91,0	1/1:1,30:34:255,81,0	1/1:1,39:41:255,92,0
-chr21	46147943	chr21:46147943:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,2:6:17,0,52	0/0:12,0:15:0,40,216	1/1:0,13:13:222,38,0
-chr21	46162591	chr21:46162591:M	TTTTTTTTTTTT	<18>,<19>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,6,3:9:230,54,28,108,0,84	1/2:0,1,4:5:128,68,55,18,0,3	1/2:0,5,5:11:255,88,60,89,0,60
-chr21	46164795	chr21:46164795:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,5:12:56,0,93	0/1:5,11:16:144,0,40	0/0:14,0:17:0,49,255
-chr21	46171429	chr21:46171429:M	AAAAAAAAAAAAAAAAA	<13>,<16>	.	.	Motif=A	GT:AD:DP:PL	1/2:0,12,10:25:255,179,214,255,0,255	1/1:0,23,0:25:255,75,0,255,75,255	2/2:0,0,17:19:255,255,255,55,56,0
-chr21	46171940	chr21:46171940:M	AAAAAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:4,7:13:180,0,74	1/1:0,11:11:255,33,0	0/0:9,1:10:0,4,219
-chr21	46174333	chr21:46174333:M	AAAAAACAAAACAAAAAAAAAAAAAAAA	<20>,<29>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,3,0:4:82,0,0,85,9,93	1/1:0,3,0:5:119,15,0,119,15,119	0/2:1,0,8:11:109,140,255,0,39,10
-chr21	46179076	chr21:46179076:M	AAAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,10:18:214,0,161	1/1:2,19:25:255,20,0	0/0:19,0:21:0,60,255
-chr21	46184714	chr21:46184714:M	CCACCACCACCACCA	<4>	.	.	Motif=CCA	GT:AD:DP:PL	0/1:22,19:41:115,0,152	0/1:26,20:46:110,0,181	0/1:37,13:50:18,0,255
-chr21	46186838	chr21:46186838:M	TTTGTTTGTTTGATTTCTTTTTTGT	<5.2>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,25:27:255,71,0	1/1:0,31:34:255,88,0	0/1:8,26:36:255,0,10
-chr21	46198268	chr21:46198268:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,37:40:255,98,0	1/1:0,31:32:255,94,0	0/1:16,22:40:255,0,171
-chr21	46198830	chr21:46198830:M	AAAAAAAAAAAAAAAAAAAAAAA	<22>,<24>	.	.	Motif=A	GT:AD:DP:PL	0/2:2,0,4:7:52,69,131,0,30,18	0/2:1,0,2:5:33,34,65,0,5,6	0/1:3,6,2:11:71,0,42,68,10,160
-chr21	46201802	chr21:46201802:M	TTTTTTTTTTTTTT	<11>,<13>,<15>	.	.	Motif=T	GT:AD:DP:PL	2/3:2,0,14,8:25:255,255,255,113,224,173,231,255,0,255	2/2:0,0,22,0:23:255,255,255,67,66,0,255,255,69,255	1/3:0,21,0,8:30:255,142,158,255,219,255,255,0,255,255
-chr21	46218728	chr21:46218728:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:13,0:14:0,41,243	0/1:12,4:16:22,0,158	0/0:24,0:24:0,70,255
-chr21	46221363	chr21:46221363:M	TTTATTTTATT	<2.8>	.	.	Motif=TTTAT	GT:AD:DP:PL	1/1:0,41:41:255,123,0	1/1:0,35:35:255,105,0	1/1:0,36:36:255,108,0
-chr21	46226136	chr21:46226136:M	AAAAAAAAAAAAAAAATACAAAAAAA	<25>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,4:26:14,0,255	0/0:18,0:19:0,55,255	0/1:7,12:21:170,0,64
-chr21	46227705	chr21:46227705:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:31,0:33:0,93,255	0/0:36,0:43:0,113,255	0/1:18,12:32:241,0,255
-chr21	46228807	chr21:46228807:M	CCGCCCAGCCCCGCCCCTCCCGCCCCTCCCGCCCCTCCCGCCCC	<7>	.	.	Motif=CCGCC	GT:AD:DP:PL	0/1:3,2:7:35,0,57	1/1:0,5:6:122,15,0	0/1:1,4:6:80,0,8
-chr21	46229190	chr21:46229190:M	GGGCGGGGGCGGGG	<3.3>	.	.	Motif=GGGCGG	GT:AD:DP:PL	0/1:12,3:15:14,0,187	0/0:11,0:11:0,32,200	0/1:6,6:12:77,0,78
-chr21	46232748	chr21:46232748:M	AAAAAACAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:28,26:54:255,0,255	1/1:0,33:33:255,97,0	0/0:40,0:40:0,118,255
-chr21	46237101	chr21:46237101:M	TTTTTTTTTTTTTTTTTTT	<18>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,11:13:188,220,255,20,36,0	2/2:1,0,9:10:136,163,255,12,27,0	1/2:1,8,4:16:191,67,88,147,0,219
-chr21	46242986	chr21:46242986:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:44,1:46:0,118,255	0/0:30,1:32:0,77,255	0/1:15,21:36:234,0,136
-chr21	46247124	chr21:46247124:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,1:33:0,78,255	0/0:32,0:33:0,87,255	0/1:18,14:34:165,0,236
-chr21	46248617	chr21:46248617:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:29,0:31:0,88,255	0/0:37,1:39:0,97,255	0/1:22,15:40:158,0,255
-chr21	46251882	chr21:46251882:M	TTTTTTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,2:6:18,0,41	0/0:2,0:4:0,11,57	1/1:1,6:8:86,3,0
-chr21	46257925	chr21:46257925:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	0/0:17,0:19:0,55,255	0/0:15,1:17:0,32,248	0/1:5,5:11:64,0,56
-chr21	46258738	chr21:46258738:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>,<18.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:21,26,0:47:255,0,255,255,255,255	1/1:0,51,0:51:255,150,0,255,153,255	0/2:20,0,14:34:255,255,255,0,255,255
-chr21	46259905	chr21:46259905:M	AAAAAAAAAAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,15:25:255,0,145	0/0:8,0:9:0,26,227	0/1:9,18:31:255,0,173
-chr21	46261733	chr21:46261733:M	AAAAAAAAAAAAAAAAAGAAAGAAAAA	<25>,<26>	.	.	Motif=A	GT:AD:DP:PL	0/2:6,0,6:13:70,91,250,0,115,81	2/2:0,0,16:16:255,255,255,47,47,0	0/1:11,14,2:27:255,0,232,212,160,255
-chr21	46274939	chr21:46274939:M	AAAAAAAAAAAAAAAAAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/1:5,3:8:28,0,63	0/0:7,1:9:0,10,111	1/1:0,1:4:16,2,0
-chr21	46276741	chr21:46276741:M	TTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	0/1:15,9,0:26:113,0,204,181,236,255	1/1:0,23,0:25:255,73,0,255,75,255	0/2:9,1,4:14:32,53,217,0,120,132
-chr21	46278165	chr21:46278165:M	AAAAAAAAAAAAA	<11>	.	.	Motif=A	GT:AD:DP:PL	0/0:36,0:38:0,108,255	0/0:41,1:45:0,104,255	0/1:21,30:51:255,0,255
-chr21	46278990	chr21:46278990:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,4:20:19,0,198	0/1:8,4:15:34,0,112	0/0:22,4:29:0,4,255
-chr21	46280813	chr21:46280813:M	TTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:39,0:39:0,115,255	0/0:37,1:38:0,94,255	0/1:21,14:35:139,0,255
-chr21	46285613	chr21:46285613:M	AAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:35,0:37:0,108,255	0/0:36,0:38:0,111,255	0/1:20,14:34:155,0,255
-chr21	46288016	chr21:46288016:M	AAAAAAAAAAGAAAAGAAAAA	<22>	.	.	Motif=A	GT:AD:DP:PL	0/0:28,0:29:0,85,255	0/0:27,1:29:0,65,255	0/1:20,19:39:235,0,255
-chr21	46288678	chr21:46288678:M	AAAAAGAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:25,0:28:0,77,255	0/0:28,0:29:0,84,255	0/1:11,21:33:255,0,202
-chr21	46290211	chr21:46290211:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:42,1:43:0,108,255	0/0:42,2:44:0,94,255	0/1:28,19:47:212,0,255
-chr21	46291020	chr21:46291020:M	AAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	0/0:23,1:25:0,55,255	0/0:15,1:20:0,27,243	0/1:15,5:20:30,0,208
-chr21	46294759	chr21:46294759:M	AAAAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,25:28:255,82,0	1/1:0,19:23:255,67,0	1/1:0,35:36:255,108,0
-chr21	46299048	chr21:46299048:M	TTTTTTTTTTTTTTTTT	<16>,<20>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,7,8:17:255,195,177,87,0,176	2/2:0,1,10:13:255,248,247,15,3,0	1/2:0,3,9:13:255,231,227,37,0,57
-chr21	46301144	chr21:46301144:M	TTTTTATTTTATTTTT	<2.8>	.	.	Motif=TTTTTA	GT:AD:DP:PL	1/1:0,33:33:255,91,0	1/1:0,41:41:255,113,0	1/1:0,29:29:255,80,0
-chr21	46302072	chr21:46302072:M	TGGTGGTGGTGGTGGTGGTGGTG	<8.7>	.	.	Motif=TGG	GT:AD:DP:PL	0/0:27,0:27:0,80,255	0/0:29,0:29:0,85,255	0/1:18,11:29:122,0,253
-chr21	46303678	chr21:46303678:M	ACACACACACACACACACACACACACACA	<13.5>	.	.	Motif=AC	GT:AD:DP:PL	0/1:4,5:14:55,0,15	0/0:11,0:13:0,34,133	1/1:1,4:7:51,8,0
-chr21	46303709	chr21:46303709:M	ATATATATATATATATATATATATATATATATATATAT	<13.5>,<15.5>	.	.	Motif=AT	GT:AD:DP:PL	0/2:0,0,3:7:80,57,73,0,18,3	1/2:0,4,3:11:255,54,22,101,0,71	0/0:0,0,0:2:0,3,9,3,9,9
-chr21	46303746	chr21:46303746:M	TTTTTTTTTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	0/2:0,0,0:2:2,4,8,0,3,1	2/2:0,0,3:4:106,80,71,12,9,0	1/2:0,4,2:8:163,46,28,94,0,81
-chr21	46304021	chr21:46304021:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,3:4:39,0,5	0/0:1,0:1:0,3,16	1/1:0,4:4:66,12,0
-chr21	46305328	chr21:46305328:M	TTTTTTTTTTTTTTTTTTTT	<19>,<21>	.	.	Motif=T	GT:AD:DP:PL	1/2:3,3,5:12:81,45,138,25,0,99	0/2:5,0,4:9:42,68,187,0,71,59	0/2:6,1,2:9:9,17,122,0,70,95
-chr21	46306070	chr21:46306070:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:8,8:17:104,0,96	0/0:23,1:24:0,53,255	1/1:1,24:26:255,58,0
-chr21	46309462	chr21:46309462:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,11:24:134,0,133	1/1:1,24:26:255,59,0	0/1:15,4:20:12,0,215
-chr21	46320513	chr21:46320513:M	AAAAAAAAAAAAAAAAAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:3:56,5,0	1/1:0,5:8:183,23,0	0/0:1,0:2:0,4,33
-chr21	46321902	chr21:46321902:M	TTTTTTTTTTTTTTTTTTTT	<18>,<22>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:11:211,87,92,127,0,118	0/2:1,0,5:9:131,143,194,0,31,8	0/1:1,5,0:10:131,0,26,139,28,178
-chr21	46327386	chr21:46327386:M	TTTTCTTTTTCTTTTTTTTTCTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/0:35,0:35:0,105,255	0/0:35,0:35:0,105,255	0/1:23,11:34:196,0,255
-chr21	46335690	chr21:46335690:M	TTTTTTTTTTTTTTTT	<15>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:4,4,9:18:76,66,159,17,0,65	0/1:11,7,0:19:41,0,77,92,100,250	0/2:13,1,8:22:34,82,255,0,108,105
-chr21	46336987	chr21:46336987:M	TTTGTTTGTTTGTTTGTTTGTTTGTTTTTTTG	<7>	.	.	Motif=TTTG	GT:AD:DP:PL	1/1:0,34:34:255,101,0	1/1:0,36:37:255,108,0	1/1:0,36:36:255,106,0
-chr21	46338605	chr21:46338605:M	TTTTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,62,0	1/1:1,22:25:255,55,0	1/1:0,14:16:255,46,0
-chr21	46341947	chr21:46341947:M	TTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,22:23:255,49,0	1/1:1,26:28:255,64,0	1/1:2,31:35:255,66,0
-chr21	46353716	chr21:46353716:M	GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	<13.5>,<16.5>	.	.	Motif=GT	GT:AD:DP:PL	1/2:0,10,10:22:255,255,255,255,0,255	1/1:0,27,0:28:255,84,0,255,84,255	0/2:8,0,9:20:218,253,255,0,203,158
-chr21	46358598	chr21:46358598:M	TTTTTGTTGTTGTTGTTGTTTTGTTGTTTTGTTTTTTTTTTTTTT	<7.7>	.	.	Motif=TTTTTG	GT:AD:DP:PL	0/1:9,6:16:17,0,33	0/0:16,0:16:0,38,126	1/1:0,10:10:79,24,0
-chr21	46360214	chr21:46360214:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<27>	.	.	Motif=T	GT:AD:DP:PL	0/1:2,1:4:6,0,34	0/0:8,0:9:0,26,143	0/1:1,4:6:60,0,0
-chr21	46360521	chr21:46360521:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,26:26:255,77,0	1/1:2,17:21:255,26,0	1/1:1,17:19:255,37,0
-chr21	46367311	chr21:46367311:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	0/0:15,0:17:0,47,255	0/0:22,0:23:0,67,255	0/1:7,9:17:119,0,75
-chr21	46371215	chr21:46371215:M	TTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	1/1:3,20:28:227,25,0	1/1:1,12:15:154,26,0	0/1:9,6:16:37,0,77
-chr21	46373432	chr21:46373432:M	TTTTTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,9:10:255,30,0	1/1:1,7:11:202,1,0	0/1:2,4:7:96,0,37
-chr21	46374850	chr21:46374850:M	AAAAAAAAAAAAAAAAAAAAAA	<23>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,3:4:40,0,6	0/1:3,2:6:19,0,35	0/1:5,2:7:14,0,65
-chr21	46381197	chr21:46381197:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<19.5>,<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,4,2,0:6:161,31,14,62,0,45,134,26,62,124	1/1:0,8,1,0:11:255,33,0,158,16,129,255,30,156,246	2/3:0,2,7,4:13:255,179,149,62,30,24,128,58,0,94
-chr21	46395592	chr21:46395592:M	AATAATAATAAAATA	<6>	.	.	Motif=AAT	GT:AD:DP:PL	0/1:40,10:50:42,0,255	0/1:42,16:58:118,0,255	0/1:46,16:62:115,0,255
-chr21	46398805	chr21:46398805:M	TTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTTT	<32>	.	.	Motif=T	GT:AD:DP:PL	0/1:4,1:5:3,0,58	0/0:6,1:8:0,6,102	0/1:2,4:6:53,0,18
-chr21	46400513	chr21:46400513:M	TTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:12,0,12	1/1:0,1:2:17,3,0	0/1:1,3:4:40,0,6
-chr21	46408720	chr21:46408720:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/1:6,9:15:116,0,63	1/1:0,8:10:157,29,0	0/0:15,0:15:0,44,255
-chr21	46409191	chr21:46409191:M	TTTTTTTTTTTTTTTTTT	<21>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:8:249,24,0	0/1:0,4:7:110,0,5	0/1:6,2:10:25,0,187
-chr21	46413995	chr21:46413995:M	TTTTTTTTTTTTTTT	<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,20:21:255,50,0	1/1:0,20:21:255,61,0	0/1:15,11:28:107,0,162
-chr21	46414456	chr21:46414456:M	CCTCCTCCTCCT	<7>	.	.	Motif=CCT	GT:AD:DP:PL	1/1:0,3:3:82,9,0	1/1:0,5:5:137,15,0	0/0:13,0:13:0,39,255
-chr21	46438670	chr21:46438670:M	TTTTTTTTTTTTTTTTTTTTT	<20>	.	.	Motif=T	GT:AD:DP:PL	0/0:11,2:13:0,2,163	0/0:10,2:12:0,1,137	0/1:6,7:13:85,0,68
-chr21	46444648	chr21:46444648:M	TTTTTTTTTTTTTTTTT	<14>,<16>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,15,10:27:255,184,205,255,0,255	1/1:0,20,0:22:255,66,0,255,66,255	1/2:0,10,16:29:255,255,255,255,0,228
-chr21	46449317	chr21:46449317:M	TTTTTTTTTTTTTTT	<16>	.	.	Motif=T	GT:AD:DP:PL	0/0:34,1:36:0,87,255	0/0:28,1:35:0,74,255	0/1:22,9:34:61,0,255
-chr21	46453744	chr21:46453744:M	TTTTTTTTTTTTTTTTT	<16>,<18>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,6,6:14:174,93,133,98,0,137	1/1:0,21,0:23:255,67,0,255,69,255	1/2:4,6,6:19:131,53,138,60,0,143
-chr21	46463681	chr21:46463681:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<20.5>,<21.5>	.	.	Motif=TG	GT:AD:DP:PL	0/2:7,0,12:19:255,199,255,0,117,140	0/0:17,1,0:21:0,42,255,57,255,255	1/2:1,7,8:16:255,116,88,82,0,81
-chr21	46464818	chr21:46464818:M	TTTTTTTTTTTTTTTTTTTTTTTTTTT	<33>,<34>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,3,1:5:114,16,5,49,0,37	2/2:0,0,4:5:142,88,75,15,14,0	0/0:0,0,0:1:0,0,0,0,0,0
-chr21	46467296	chr21:46467296:M	AAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:7,7:18:137,0,170	1/1:0,3:3:81,9,0	0/1:10,5:16:89,0,225
-chr21	46468262	chr21:46468262:M	AAAAAAAAAAAAAAAAAAAA	<21>	.	.	Motif=A	GT:AD:DP:PL	0/1:1,2:4:27,0,9	0/1:1,3:4:39,0,5	1/1:0,4:5:80,14,0
-chr21	46468413	chr21:46468413:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:16,15:33:132,0,155	1/1:0,16:20:255,53,0	0/1:11,9:24:95,0,104
-chr21	46470475	chr21:46470475:M	AAAAAAAAAAA	<12>	.	.	Motif=A	GT:AD:DP:PL	0/1:20,12:33:123,0,255	0/0:21,0:22:0,64,255	0/1:7,17:25:240,0,52
-chr21	46470764	chr21:46470764:M	AAAAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/0:20,1:21:0,44,255	0/0:14,0:15:0,44,251	0/1:13,5:18:36,0,178
-chr21	46476080	chr21:46476080:M	AAAAAAAAAAAAAAAAA	<16>	.	.	Motif=A	GT:AD:DP:PL	1/1:3,28:32:255,39,0	1/1:0,31:33:255,96,0	1/1:1,25:29:255,66,0
-chr21	46476243	chr21:46476243:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,36:36:255,106,0	1/1:2,30:33:255,61,0	0/1:20,16:37:185,0,255
-chr21	46476653	chr21:46476653:M	TTTTTTTTTTTTTTTTTT	<16>,<17>	.	.	Motif=T	GT:AD:DP:PL	1/2:0,5,3:8:181,47,32,91,0,69	2/2:0,0,4:5:71,62,59,12,4,0	0/2:6,0,4:12:41,52,217,0,106,86
-chr21	46477544	chr21:46477544:M	TGTGTGTGTGTGTGTGTGTGTGTGT	<18.5>,<23.5>	.	.	Motif=TG	GT:AD:DP:PL	1/2:0,6,8:14:255,195,177,149,0,125	2/2:0,0,3:3:85,85,85,9,9,0	1/2:0,4,1:6:122,24,10,98,0,95
-chr21	46477741	chr21:46477741:M	TTTTTTTGTTTTGTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,24:24:255,72,0	1/1:0,13:13:255,39,0	0/1:10,10:20:213,0,214
-chr21	46480058	chr21:46480058:M	TTTTTTTTTTTTTTT	<13>,<14>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,13,2:16:255,42,0,253,10,213	2/2:2,2,17:23:255,230,255,27,18,0	0/1:8,6,0:15:135,0,190,113,141,218
-chr21	46485237	chr21:46485237:M	TGTGTGTGTGTGTGTGTGTGT	<9.5>	.	.	Motif=TG	GT:AD:DP:PL	0/0:38,1:39:0,96,255	0/0:32,2:34:0,64,255	0/1:16,27:43:255,0,172
-chr21	46492932	chr21:46492932:M	AAAAAAAAAAGGAAGAAAAAAAAAA	<24>,<26>,<27>	.	.	Motif=A	GT:AD:DP:PL	2/3:0,0,17,10:28:255,255,255,195,196,117,255,255,0,237	3/3:0,0,2,15:18:255,255,255,255,255,241,48,53,17,0	1/2:1,14,18,0:33:255,255,255,236,0,255,255,255,255,255
-chr21	46496071	chr21:46496071:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,2:2:33,6,0	1/1:0,1:1:16,3,0	1/1:0,6:6:99,17,0
-chr21	46502303	chr21:46502303:M	TTTTTTTTTTT	<10>	.	.	Motif=T	GT:AD:DP:PL	0/0:31,0:34:0,99,255	0/0:36,0:36:0,106,255	0/1:12,18:30:248,0,136
-chr21	46503326	chr21:46503326:M	AAAAAAAAAAAAAAAAAA	<17>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,7:10:120,9,0	1/1:0,12:14:225,40,0	0/1:6,5:13:71,0,68
-chr21	46503572	chr21:46503572:M	CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT	<8.8>,<12.8>	.	.	Motif=CTTC	GT:AD:DP:PL	1/2:0,0,1:2:33,21,22,15,0,12	2/2:0,0,3:3:64,71,84,9,9,0	1/1:0,5,0:8:111,15,0,124,15,161
-chr21	46506725	chr21:46506725:M	TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCTTTTCTTTCTTTTCTTTCTTTCTTCTCTTT	<14.5>,<18>	.	.	Motif=TTTC	GT:AD:DP:PL	1/2:0,10,2:15:255,94,65,255,0,250	2/2:0,0,18:18:255,255,255,54,54,0	1/1:0,8,0:10:218,11,0,222,24,236
-chr21	46506805	chr21:46506805:M	TTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/0:23,0:24:0,70,255	0/1:8,2:12:5,0,107	0/1:6,10:17:126,0,65
-chr21	46508043	chr21:46508043:M	TTTTTTTTTTTTTT	<15>	.	.	Motif=T	GT:AD:DP:PL	0/1:12,7:19:73,0,165	0/0:25,1:27:0,61,255	0/1:18,6:24:37,0,254
-chr21	46508354	chr21:46508354:M	TTTTTTTTTTTTTTTTTTTTTTT	<24>	.	.	Motif=T	GT:AD:DP:PL	0/1:1,1:2:11,0,11	1/1:0,2:3:44,9,0	0/1:3,4:8:47,0,31
-chr21	46510628	chr21:46510628:M	TTTTTTTTTTTTTTTTTTTTT	<17>,<20>	.	.	Motif=T	GT:AD:DP:PL	2/2:1,0,6:8:102,122,210,6,24,0	2/2:0,0,6:8:126,143,206,23,24,0	1/2:1,4,6:13:202,86,157,117,0,113
-chr21	46512801	chr21:46512801:M	AAAAAAAAAAACAAACAAAACAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,18:33:255,0,231	1/1:0,29:37:255,100,0	0/0:46,0:46:0,138,255
-chr21	46514436	chr21:46514436:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/0:24,1:27:0,60,255	0/0:25,0:25:0,73,255	0/1:11,14:25:180,0,126
-chr21	46515453	chr21:46515453:M	TTTTTTTTTTTTT	<12>	.	.	Motif=T	GT:AD:DP:PL	0/0:33,1:35:0,85,255	0/0:29,0:30:0,88,255	0/1:26,20:47:224,0,255
-chr21	46523394	chr21:46523394:M	TTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	0/1:5,2:7:38,0,122	1/1:0,5:5:138,15,0	0/0:1,0:3:0,6,40
-chr21	46524873	chr21:46524873:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,11:14:255,37,0	1/1:0,4:4:107,12,0	1/1:0,5:5:146,15,0
-chr21	46525864	chr21:46525864:M	ATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATT	<14>,<15>,<17>	.	.	Motif=ATT	GT:AD:DP:PL	2/3:0,1,14,6:21:255,255,255,159,139,112,255,237,0,255	3/3:0,0,0,5:5:146,146,146,144,144,141,15,15,15,0	1/2:0,8,8,0:16:255,144,98,144,0,98,255,144,144,255
-chr21	46527326	chr21:46527326:M	TTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,4:6:145,18,0	1/1:0,8:9:250,27,0	1/1:0,0:2:22,5,0
-chr21	46528528	chr21:46528528:M	TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	<23>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,5:6:142,18,0	1/1:0,3:3:77,9,0	.
-chr21	46529606	chr21:46529606:M	AAAAAAAAAAAAAA	<15>	.	.	Motif=A	GT:AD:DP:PL	0/1:17,13:31:156,0,220	1/1:0,24:24:255,70,0	0/0:36,1:41:0,99,255
-chr21	46536904	chr21:46536904:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,27:29:255,66,0	1/1:1,19:20:255,41,0	0/1:15,16:32:193,0,185
-chr21	46538371	chr21:46538371:M	TGTCTGTCTGT	<1.8>	.	.	Motif=TGTC	GT:AD:DP:PL	0/1:18,20:38:255,0,236	0/0:24,0:24:0,71,255	0/1:29,15:44:152,0,255
-chr21	46547657	chr21:46547657:M	TTTTTTTTTTTTTTTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	1/1:0,8:9:153,26,0	1/1:0,3:4:60,11,0	0/1:2,0:5:12,0,34
-chr21	46548175	chr21:46548175:M	TGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTG	<23>	.	.	Motif=TG	GT:AD:DP:PL	0/1:4,12:16:255,0,61	1/1:1,15:16:255,21,0	0/0:20,0:21:0,63,255
-chr21	46569484	chr21:46569484:M	AAAAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:11,17:30:231,0,122	0/0:23,0:25:0,70,255	0/1:25,17:48:197,0,255
-chr21	46587158	chr21:46587158:M	AAAAACAAAAACAAAAACAA	<2.3>	.	.	Motif=AAAAAC	GT:AD:DP:PL	1/1:0,45:45:255,133,0	1/1:0,53:53:255,156,0	1/1:0,52:52:255,154,0
-chr21	46589944	chr21:46589944:M	AAAAAAAAAAAAAA	<13>	.	.	Motif=A	GT:AD:DP:PL	0/1:19,19:40:255,0,236	0/0:23,3:27:0,26,255	0/1:17,18:36:233,0,203
-chr21	46599781	chr21:46599781:M	AAAAAAAAAAA	<10>	.	.	Motif=A	GT:AD:DP:PL	0/1:14,20:35:255,0,172	0/0:37,0:37:0,109,255	0/1:31,22:53:252,0,255
-chr21	46611501	chr21:46611501:M	AAAAAAAAAAAAAAAAAAAAAAAAAAA	<26>	.	.	Motif=A	GT:AD:DP:PL	.	0/0:3,0:6:0,13,62	1/1:0,3:5:50,9,0
-chr21	46616504	chr21:46616504:M	TGTGTGTGTGTGTGTGTGT	<11.5>	.	.	Motif=TG	GT:AD:DP:PL	0/1:13,26:39:255,0,185	0/0:13,1:14:0,19,255	0/1:7,21:28:255,0,78
-chr21	46616522	chr21:46616522:M	TATATATATATATATATATATATAT	<10.5>	.	.	Motif=TA	GT:AD:DP:PL	1/1:0,24:37:255,72,0	0/0:0,0:6:0,6,21	1/1:0,19:27:255,49,0
-chr21	46617772	chr21:46617772:M	TCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCTATCTATCTAT	<12.5>	.	.	Motif=TCTA	GT:AD:DP:PL	0/1:9,13:23:255,0,190	1/1:0,41:41:255,123,0	0/1:6,19:25:255,0,92
-chr21	46632747	chr21:46632747:M	AAAAAAAAAAAAA	<14>	.	.	Motif=A	GT:AD:DP:PL	0/1:15,19:34:252,0,178	0/1:5,28:38:255,0,1	0/1:18,12:31:127,0,245
-chr21	46641124	chr21:46641124:M	AAAAAAAAAAAAAAAAA	<19>	.	.	Motif=A	GT:AD:DP:PL	1/1:0,8:9:220,24,0	1/1:0,4:6:111,12,0	1/1:0,11:11:255,33,0
-chr21	46641720	chr21:46641720:M	TGTGTGTGTGTGTGTGTGTGTGTGTGTGT	<12.5>	.	.	Motif=TG	GT:AD:DP:PL	1/1:0,31:33:255,98,0	1/1:0,30:31:255,93,0	1/1:0,27:28:255,84,0
-chr21	46643476	chr21:46643476:M	AAAAAAAAAAAAAAAAA	<18>	.	.	Motif=A	GT:AD:DP:PL	1/1:1,15:16:244,29,0	0/1:2,7:11:94,0,12	0/1:2,6:8:80,0,11
-chr21	46645092	chr21:46645092:M	AAAAAAAAAATTAAAAAAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:12,10:23:122,0,166	0/0:37,0:37:0,109,255	0/1:21,10:31:94,0,255
-chr21	46645267	chr21:46645267:M	AAAAAAAAAAAAAA	<12>,<13>	.	.	Motif=A	GT:AD:DP:PL	1/2:1,14,28:43:255,255,255,188,0,82	2/2:4,0,35:39:255,255,255,54,111,0	1/2:0,13,29:43:255,255,255,196,0,77
-chr21	46657377	chr21:46657377:M	AAAAAAAAAAAAAACAAAA	<20>	.	.	Motif=A	GT:AD:DP:PL	0/1:18,21:42:255,0,229	0/0:25,0:28:0,81,255	0/1:20,17:38:188,0,251
-chr21	46666304	chr21:46666304:M	TTTTCTTTTTTTTTTTTTT	<18>	.	.	Motif=T	GT:AD:DP:PL	0/1:7,16:23:233,0,62	0/0:30,1:31:0,74,255	0/1:6,6:13:82,0,72
-chr21	46668752	chr21:46668752:M	TTTTTTTTTTTTTT	<12>,<13>	.	.	Motif=T	GT:AD:DP:PL	1/2:1,20,20:41:255,255,255,255,0,255	1/1:0,38,0:38:255,114,0,255,112,255	1/2:1,24,26:51:255,255,255,255,0,255
-chr21	46675495	chr21:46675495:M	TTTTTTTTTTTTTTTT	<17>	.	.	Motif=T	GT:AD:DP:PL	1/1:1,12:14:209,22,0	1/1:0,15:15:255,44,0	1/1:1,17:18:255,35,0
-chr21	46676397	chr21:46676397:M	TTTTTTTTTTTTTCTTTTTTTTTTTT	<25>	.	.	Motif=T	GT:AD:DP:PL	0/1:10,13:25:170,0,116	1/1:0,19:20:255,59,0	0/1:16,10:26:100,0,203
-chr21	46688832	chr21:46688832:M	ACACACACACACACACACACACACACACACACA	<12.5>,<17.5>	.	.	Motif=AC	GT:AD:DP:PL	1/2:0,19,10:31:255,144,193,255,0,255	1/2:0,30,4:35:255,56,9,255,0,255	1/2:0,29,11:42:255,159,194,255,0,255
-chr21	46699291	chr21:46699291:M	CGCGCCGCGCC	<3.2>	.	.	Motif=CGCGC	GT:AD:DP:PL	0/0:20,0:20:0,56,255	0/0:61,3:64:0,140,255	0/1:1,3:4:28,0,2
diff --git a/trtools/mergeSTR/tests/mydir/test_popstr_outputcurrent b/trtools/mergeSTR/tests/mydir/test_popstr_outputcurrent
deleted file mode 120000
index 03e5f46b..00000000
--- a/trtools/mergeSTR/tests/mydir/test_popstr_outputcurrent
+++ /dev/null
@@ -1 +0,0 @@
-/workspaces/TRTools/trtools/mergeSTR/tests/mydir/test_popstr_output0
\ No newline at end of file

From 1c895f212abbfa843c18dc32a87c87cac377401c Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Mon, 5 Aug 2024 16:11:18 +0000
Subject: [PATCH 11/12] add test_CheckIdenticalAlleleOrder

---
 trtools/mergeSTR/mergeSTR.py                    |   4 ----
 trtools/mergeSTR/tests/test_mergeSTR.py         |  10 +++++++---
 .../hipstr_imputed_difforder.vcf.gz             | Bin 0 -> 30091 bytes
 .../hipstr_imputed_difforder.vcf.gz.tbi         | Bin 0 -> 130 bytes
 4 files changed, 7 insertions(+), 7 deletions(-)
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_difforder.vcf.gz
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_difforder.vcf.gz.tbi

diff --git a/trtools/mergeSTR/mergeSTR.py b/trtools/mergeSTR/mergeSTR.py
index a1838955..d6459b1e 100644
--- a/trtools/mergeSTR/mergeSTR.py
+++ b/trtools/mergeSTR/mergeSTR.py
@@ -39,7 +39,6 @@
     trh.VcfTypes.advntr: [("END", True), ("VID", True), ("RU", True), ("RC", True)]
 }
 
-#BEAGLEINFOFIELDS = ["IMP"]
 # Tool-specific format fields to merge
 # Not all fields currently handled
 # If not listed here, it is ignored
@@ -125,9 +124,6 @@ def get_header_lines(field: str, reader: cyvcf2.VCF) -> List[str]:
     # Write INFO fields, different for each tool
     useinfo: List[Tuple[str, bool]] = []
     infos = get_header_lines('info', readers[0])
-    #attempt_info_fields = INFOFIELDS[vcftype].copy() # copy since we will modify
-    #if isbeagle:
-    #    attempt_info_fields.extend(BEAGLEINFOFIELDS)
     for (field, reqd) in INFOFIELDS[vcftype]:
         this_info = [line for line in infos if 'ID=' + field + ',' in line]
         if len(this_info) == 0:
diff --git a/trtools/mergeSTR/tests/test_mergeSTR.py b/trtools/mergeSTR/tests/test_mergeSTR.py
index 7c4889a8..fbc983bd 100644
--- a/trtools/mergeSTR/tests/test_mergeSTR.py
+++ b/trtools/mergeSTR/tests/test_mergeSTR.py
@@ -287,7 +287,13 @@ def test_DifferentAltAllele(args, mrgvcfdir,capsys):
     assert main(args) == 0
     assert ("Conflicting alt alleles found at" in capsys.readouterr().err)
     
-
+#check if identical allele order
+def test_CheckIdenticalAlleleOrder(args,mrgvcfdir,capsys):
+    fname1 = os.path.join(mrgvcfdir, "hipstr_imputed_merge1.vcf.gz")
+    fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_difforder.vcf.gz")
+    args.vcfs = fname1 + "," + fname2
+    assert main(args) == 0
+    assert ("Conflicting alt alleles found at" in capsys.readouterr().err)
 
 def test_GetInfoItem(capsys):
     # Set up dummy records
@@ -394,8 +400,6 @@ def test_hipstr_output_Beagle(args, mrgvcfdir):
     fname2 = os.path.join(mrgvcfdir, "hipstr_imputed_merge2.vcf.gz")
     args.vcftype = "hipstr"
     args.vcfs = fname1 + "," + fname2
-    
-
     with gzip.open(mrgvcfdir+"/hipstr_imputed_merged.vcf.gz", 'r') as f_in, open("hipstr_imputed_merged.vcf", 'wb') as f_out:
         shutil.copyfileobj(f_in, f_out)
     assert main(args) == 0
diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_difforder.vcf.gz b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_difforder.vcf.gz
new file mode 100644
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diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_difforder.vcf.gz.tbi b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_imputed_difforder.vcf.gz.tbi
new file mode 100644
index 0000000000000000000000000000000000000000..0bb6ec8d3444edfea6dc2dee62461c2dfa0fbbaf
GIT binary patch
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literal 0
HcmV?d00001


From 92671be05e3c5cb5f2ee4f6ffb6380d1f993c123 Mon Sep 17 00:00:00 2001
From: Nichole <55827494+nicholema@users.noreply.github.com>
Date: Mon, 5 Aug 2024 16:26:13 +0000
Subject: [PATCH 12/12] Restored hipstr_merged.vcf from previous commit and
 added it to the current commit

---
 .../mergeSTR_vcfs/hipstr_merged.vcf           | 126 ++++++++++++++++++
 1 file changed, 126 insertions(+)
 create mode 100644 trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged.vcf

diff --git a/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged.vcf b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged.vcf
new file mode 100644
index 00000000..d0db38c7
--- /dev/null
+++ b/trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged.vcf
@@ -0,0 +1,126 @@
+##fileformat=VCFv4.1
+##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
+##command=HipSTR-v0.5 --bams /storage/gtex-data/wgs/SRR2163846.bam --fasta /storage/resources/Homo_sapiens_assembly19.fasta --regions /storage/resources/GRCh37.hipstr_reference.bed --min-reads 5 --str-vcf /storage/vcfs/SRR2163846.vcf.gz --def-stutter-model --log /storage/vcfs/SRR2163846.log.txt
+##command=/Users/yang/Desktop/TRTools/trtools/mergeSTR/mergeSTR.py --vcfs trtools/testsupport/sample_vcfs/mergeSTR_vcfs/test_file_hipstr1.vcf.gz,trtools/testsupport/sample_vcfs/mergeSTR_vcfs/test_file_hipstr2.vcf.gz --vcftype hipstr --out trtools/testsupport/sample_vcfs/mergeSTR_vcfs/hipstr_merged
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+##contig=<ID=GL000193.1,length=189789>
+##contig=<ID=GL000194.1,length=191469>
+##contig=<ID=GL000225.1,length=211173>
+##contig=<ID=GL000192.1,length=547496>
+##contig=<ID=NC_007605,length=171823>
+##INFO=<ID=INFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for in-frame geometric step size distribution">
+##INFO=<ID=INFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an in-frame increase in obs. STR size">
+##INFO=<ID=INFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an in-frame decrease in obs. STR size">
+##INFO=<ID=OUTFRAME_PGEOM,Number=1,Type=Float,Description="Parameter for out-of-frame geometric step size distribution">
+##INFO=<ID=OUTFRAME_UP,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame increase in read's STR size">
+##INFO=<ID=OUTFRAME_DOWN,Number=1,Type=Float,Description="Probability that stutter causes an out-of-frame decrease in read's STR size">
+##INFO=<ID=BPDIFFS,Number=A,Type=Integer,Description="Base pair difference of each alternate allele from the reference allele">
+##INFO=<ID=START,Number=1,Type=Integer,Description="Inclusive start coodinate for the repetitive portion of the reference allele">
+##INFO=<ID=END,Number=1,Type=Integer,Description="Inclusive end coordinate for the repetitive portion of the reference allele">
+##INFO=<ID=PERIOD,Number=1,Type=Integer,Description="Length of STR motif">
+##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles in called genotypes">
+##INFO=<ID=REFAC,Number=1,Type=Integer,Description="Reference allele count">
+##INFO=<ID=AC,Number=A,Type=Integer,Description="Alternate allele counts">
+##INFO=<ID=NSKIP,Number=1,Type=Integer,Description="Number of samples not genotyped due to various issues">
+##INFO=<ID=NFILT,Number=1,Type=Integer,Description="Number of samples whose genotypes were filtered due to various issues">
+##INFO=<ID=DP,Number=1,Type=Integer,Description="Total number of valid reads used to genotype all samples">
+##INFO=<ID=DSNP,Number=1,Type=Integer,Description="Total number of reads with SNP phasing information">
+##INFO=<ID=DSTUTTER,Number=1,Type=Integer,Description="Total number of reads with a stutter indel in the STR region">
+##INFO=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Total number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=GB,Number=1,Type=String,Description="Base pair differences of genotype from reference">
+##FORMAT=<ID=Q,Number=1,Type=Float,Description="Posterior probability of unphased genotype">
+##FORMAT=<ID=PQ,Number=1,Type=Float,Description="Posterior probability of phased genotype">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Number of valid reads used for sample's genotype">
+##FORMAT=<ID=DSNP,Number=1,Type=Integer,Description="Number of reads with SNP phasing information">
+##FORMAT=<ID=PSNP,Number=1,Type=String,Description="Number of reads with SNPs supporting each haploid genotype">
+##FORMAT=<ID=PDP,Number=1,Type=String,Description="Fractional reads supporting each haploid genotype">
+##FORMAT=<ID=GLDIFF,Number=1,Type=Float,Description="Difference in likelihood between the reported and next best genotypes">
+##FORMAT=<ID=DSTUTTER,Number=1,Type=Integer,Description="Number of reads with a stutter indel in the STR region">
+##FORMAT=<ID=DFLANKINDEL,Number=1,Type=Integer,Description="Number of reads with an indel in the regions flanking the STR">
+##FORMAT=<ID=AB,Number=1,Type=Float,Description="log10 of the allele bias pvalue, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=FS,Number=1,Type=Float,Description="log10 of the strand bias pvalue from Fisher's exact test, where 0 is no bias and more negative values are increasingly biased. 0 for all homozygous genotypes">
+##FORMAT=<ID=DAB,Number=1,Type=Integer,Description="Number of reads used in the AB and FS calculations">
+##FORMAT=<ID=ALLREADS,Number=1,Type=String,Description="Base pair difference observed in each read's Needleman-Wunsch alignment">
+##FORMAT=<ID=MALLREADS,Number=1,Type=String,Description="Maximum likelihood bp diff in each read based on haplotype alignments for reads that span the repeat region by at least 5 base pairs">
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	GTEX-R55C-0003	GTEX-R55C-0004
+1	16717	STR_2	GGTGGTGGTGGGGGCGGTGGGGGTGGTG	GGTGGTGGTGGGGGCGGTGGTGGTGCTG	.	.	START=16717;END=16744;PERIOD=3	GT:GB:Q:PQ:DP:DSNP:PSNP:PDP:GLDIFF:DSTUTTER:DFLANKINDEL:AB:FS:DAB:ALLREADS:MALLREADS	0|1:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2	0|0:0|0:1.0:0.5:121:0:0|0:96.95|24.05:29.31:3:15:-15.66:0.0:93:-23|1;0|64;1|2;9|5:0|52;9|2